rscharpf/MinimumDistance — Issue #19: RAM (+ / - ff)  / wall clock characteristics
Author: rscharpf
Created: 2012-02-08 20:23:11+00:00
State: open

With ff and 22 workers enabled:

110 trios: a total of 33G* across 22 workers (less than 2G per worker)
wall clock time: 1 hr 52 min.

1000 trios: 97G* across 22 workers (approx 4-5G per worker)
wall clock time: 17 hr 42 min.

* this was the most memory I observed being utilized when logged onto the queue and using the command 'free' suggested by Marvin (the reported max vmem doesn't reflect the total RAM required)

> free -g