gjospin/Amphora-2 — Issue #53: integration with de novo metagenome phylogeny in BEAST
Author: koadman
Created: 2012-01-31 18:05:11+00:00
State: open

A model has been implemented in the BEAST software that permits de novo phylogenetic inference and linkage estimation on metagenome reads. Some gadgetry to create BEAST XML files during the amphora2 run already exists. This needs to be further enhanced to add reference tree constraints and other features.