gjospin/Amphora-2 — Issue #17: Easy way to calculate KR distances among samples with guppy
Author: koadman
Created: 2012-01-30 23:19:10+00:00
State: open

guppy can calculate the Kantorovich Rubenstein distance among a pair of pplacer placement files. These distances are useful for assessing how similar two microbial communities are to each other. amphora2 should have a way to calculate these distances among a group of samples using the protein marker families.