rscharpf/MinimumDistance — Issue #10: smooth.CNA
Author: syounkin
Created: 2012-01-26 15:22:28+00:00
State: open

The function smooth.CNA(CNA.object) does not work when there is only one marker in CNA.object.

The object index.list separated markers greater than 75 kB into separate jobs. In my case this resulted in jobs with only one marker and it broke down.

As a temporary fix I replaced the 75 kB threshold with the absurdly large 25 MB threshold in:

arm <- splitByDistance(pos, thr=25e6)

Any thoughts?