rnaseqr/RNASEQR — Issue #2: Manual Wording
Author: DarioS
Created: 2012-01-19 01:30:19+00:00
State: open

Hello,

The Usage section could use an overhaul. Why are all of the arguments listed as "optional arguments:". Surely something like "-q PATH Input FASTQ file." is not an optional argument.

The TopHat user manual clearly separates Arguments: and Options: and this is a lot easier to read and leaves a lot less to guess.