nolanlab/spade — Issue #24: Include distance-from-consensus annotation in .gml files
Author: esimonds
Created: 2012-01-10 03:14:17+00:00
State: open

This is a spinoff of Issue #23. A helpful annotation in each .gml file (i.e. for every .fcs file) might be Euclidean distance from the centroid of the consensus values in each node. There are cases where a single FCS file has a population that is waaaay different from its peers, but it basically gets 'outvoted' and that phenotype gets lumped into a neighboring cluster during the agglomeration step. It would be handy to be able to flip through all of the ".distance-from-consensus.pdf files and check for major outlier nodes.