yannickwurm/sequenceserver — Issue #74: database_formatter fails when non-standard 
Author: wwood
Created: 2011-12-16 03:12:41+00:00
State: open

I, [2011-12-16T14:07:39.806625 #15613] INFO -- : Will run: /home/ben/bioinfo/ncbi-blast-2.2.25+/bin/makeblastdb -in /home/ben/phd/seqserv/db/PfalciparumAnnotatedProteins_PlasmoDB-8.1.fasta -dbtype prot -title "PfalciparumAnnotatedProteins_PlasmoDB-8.1.fasta" -parse_seqids

Building a new DB, current time: 12/16/2011 14:07:39
New DB name: /home/ben/phd/seqserv/db/PfalciparumAnnotatedProteins_PlasmoDB-8.1.fasta
New DB title: PfalciparumAnnotatedProteins_PlasmoDB-8.1.fasta
Sequence type: Protein
Keep Linkouts: T
Keep MBits: T
Maximum file size: 1073741824B

No volumes were created because no sequences were found.

Error: NCBI C++ Exception:
"/am/ncbiapdata/release/blast/src/2.2.25/Linux32-Suse-icc/c++/ICC1010-ReleaseMT--Linux32-Suse-icc/../src/objects/seq/../seqloc/Seq_id.cpp", line 1637: Error: ncbi::objects::CSeq_id::x_Init() - Unsupported ID type psu