AlgoLab/PIntron — Issue #6: Wrong strand for RefSeq
Author: rrizzi
Created: 2011-12-07 11:25:05+00:00
State: open

The RefSeq input sequences have by definition a 5'3' direction wrt the input genomic sequence. Because of a code mistake, PIntron considers RefSeq sequences as if they were EST sequences and searches their direction in the fasta header of the input transcript file.

PIntron version: `v1.2.18`
Source file: io-multifasta.c (line 413)