CellProfiler/CellProfiler — Issue #247: Pipeline validation fail
Author: dlogan
Created: 2011-12-01 19:20:56+00:00
State: open

If a LoadImages channel name assignment is changed, downstream modules that use the original channel are not flagged and allowed to run. But when the pipeline gets there, an error occus.

Example PIPELINE (Uses SVN 11675):
https://imageweb.broadinstitute.org/imaging/analysis/2010_05_18_Malaria_Liver_Infection_Bhatia_Lab/pipelines/PIPE_Initial_IAD_2011_12_01_11675_BAD.cp

The Identify PrimaryObjects module uses the "DAPI" channel, however DAPI is no longer an input channel (though it used to be). But the point is that I expected pipeline validation to catch this.