CellProfiler/CellProfiler — Issue #85: JIRA [IMG-1369] Correct Illumination Calculate: Per-tile correction for mosaicked images
Author: thouis
Created: 2011-11-23 20:50:00+00:00
State: open
Labels: current

A situation the IADs come across every now and again are mosiacked images (usually multi-site, stitched together) that cannot be globally corrected due to per-site illumination distortion. A workaround would be a de-tile the image, correct each individually and tile the result back together, but (a) no de-tile module as yet exists and (b) using multiple crop modules complicates things.
Settings for proposed solution:
* Is the input image is a mosaic? [Checkbox; if checked, give the following options]
* Input a grid [Previously created using DefineGrid]
* Calculate function for each tile individually, or based on all tiles? Each, All [This function would work in conjunction with the prior setting asking what cycles to compute over]

Original reporter: mbray
Jira link: https://jira.broadinstitute.org/browse/IMG-1369
Fix version: Current
Assignee: mbray

**Comment from mbray on Fri, 15 Apr 2011 08:37:34 -0400:**
Mark can try to code this, if Lee offers guidance.