CellProfiler/CellProfiler — Issue #155: JIRA [IMG-1023] Adapt CP to use WNDCHRM
Author: thouis
Created: 2011-11-23 20:50:24+00:00
State: open
Labels: future

1. New modules will subdivide an image into tiles, calculate feature sets from each
tile, and train a classifier to discern positive and negative control images.
2. We will also explore training classifiers on regions of interest (objects identified by CellProfiler's segmentation modules), rather than
image tiles.
3. We will evaluate the new methods using the IICBU test sets, whichwere gathered for this
purpose
what about the CPA-whole-img-classification we're doing? doesn't this kind of override?

Original reporter: klmadden
Jira link: https://jira.broadinstitute.org/browse/IMG-1023
Fix version: Future
Assignee: leek

**Comment from anne on Wed, 23 Nov 2011 08:17:50 -0500:**
The WND-CHARM team would be happy for us to create WND-CHARM-like functionality in CellProfiler. A visiting student, Virginie Uhlmann, has begun work on the project.