CellProfiler/CellProfiler — Issue #83: JIRA [IMG-1377] ExportToDatabase: Add gates to props/workspace files
Author: thouis
Created: 2011-11-23 20:49:59+00:00
State: open
Labels: current

In the properties file, the new gate structure is written as a list of dicts. This should be straightforward to add as an option in ExportToDB: (1) Name of gate, (2) request measurement, (2) upper lower values.
I assume as many measurements can be specified as desired to be ANDed together, even though plotting tools are limited in # of dims?
In the workspace file, the gate field is specified with the gate name. Not sure if I can add gates to workspace options in ExportToDB.
Probably need to have user specify values for limits, since I don't think I can insert an post-run experiment measure, esp. if run on the cluster.

Original reporter: mbray
Jira link: https://jira.broadinstitute.org/browse/IMG-1377
Fix version: Current
Assignee: mbray