jaberg/hyperopt — Issue #55: undefined symbol: what am I missing? 
Author: yamins81
Created: 2011-11-17 02:43:57+00:00
State: open

sys.exit(hyperopt.mongoexp.main_search())
File "/home/tools/centos5_cpu/hyperopt/hyperopt/mongoexp.py", line 1309, in main_search
self.run(options.steps, block_until_done=options.block)
File "/home/tools/centos5_cpu/hyperopt/hyperopt/mongoexp.py", line 687, in run
suggestions = algo.suggest(self.trials, self.results, 1)
File "/home/tools/centos5_cpu/hyperopt/hyperopt/theano_gp.py", line 1338, in suggest
rval = self.suggest_ivl(fn(trials, results, N))
File "/home/tools/centos5_cpu/hyperopt/hyperopt/theano_gp.py", line 1248, in suggest_from_gp
self.fit_GP(*prepared_data)
File "/home/tools/centos5_cpu/hyperopt/hyperopt/theano_gp.py", line 965, in fit_GP
mode=self.mode,
File "/opt/lib/python2.6/site-packages/Theano-0.4.1-py2.6.egg/theano/compile/function.py", line
114, in function
profile=profile)
File "/opt/lib/python2.6/site-packages/Theano-0.4.1-py2.6.egg/theano/compile/pfunc.py", line 439
, in pfunc
accept_inplace=accept_inplace, name=name, profile=profile)
File "/opt/lib/python2.6/site-packages/Theano-0.4.1-py2.6.egg/theano/compile/function_module.py"
, line 1238, in orig_function
defaults)
File "/opt/lib/python2.6/site-packages/Theano-0.4.1-py2.6.egg/theano/compile/function_module.py"
, line 1088, in create
_fn, _i, _o = self.linker.make_thunk(input_storage = input_storage_lists)
File "/opt/lib/python2.6/site-packages/Theano-0.4.1-py2.6.egg/theano/gof/link.py", line 377, in
make_thunk
output_storage = output_storage)[:3]
File "/opt/lib/python2.6/site-packages/Theano-0.4.1-py2.6.egg/theano/gof/cc.py", line 1261, in m
ake_all
no_recycling)]
File "/opt/lib/python2.6/site-packages/Theano-0.4.1-py2.6.egg/theano/gof/op.py", line 532, in ma
ke_thunk
output_storage=node_output_storage)
File "/opt/lib/python2.6/site-packages/Theano-0.4.1-py2.6.egg/theano/gof/cc.py", line 786, in ma
ke_thunk
keep_lock=keep_lock)
File "/opt/lib/python2.6/site-packages/Theano-0.4.1-py2.6.egg/theano/gof/cc.py", line 734, in __compile__
keep_lock=keep_lock)
File "/opt/lib/python2.6/site-packages/Theano-0.4.1-py2.6.egg/theano/gof/cc.py", line 1092, in c
thunk_factory
module = get_module_cache().module_from_key(key=key, fn=self.compile_cmodule_by_step, keep_loc
k=keep_lock) File "/opt/lib/python2.6/site-packages/Theano-0.4.1-py2.6.egg/theano/gof/cmodule.py", line 839,
in module_from_key
module = compile_steps.next()
File "/opt/lib/python2.6/site-packages/Theano-0.4.1-py2.6.egg/theano/gof/cc.py", line 1019, in c
ompile_cmodule_by_step
preargs=preargs) File "/opt/lib/python2.6/site-packages/Theano-0.4.1-py2.6.egg/theano/gof/cmodule.py", line 1401,
in gcc_module_compile_str
return dlimport(lib_filename)
File "/opt/lib/python2.6/site-packages/Theano-0.4.1-py2.6.egg/theano/gof/cmodule.py", line 186,
in dlimport
rval = __import__(module_name, {}, {}, [module_name])

ImportError: ('/root/.theano/compiledir_Linux-2.6.21.7-2.fc8xen-x86_64-with-redhat-5.5-Final-x86_6
4-2.6.5/tmpXluXUO/522e60758804332fe52eaa426b89aab8.so: undefined symbol: dgemm_', '[_dot22scalar(<
TensorType(float64, col)>, , TensorConstant{2.0})]')