matsen/pplacer — Issue #178: guppy compress chokes on trees without a root branch length
Author: matsen
Created: 2011-11-09 13:38:19+00:00
State: open
Labels: easy, top-ish

rhino2 darling_linkage/for_erick » /loc/no-backup/matsen/pplacer/bin/guppy.d compress --cutoff 0.05 -o PMPROK00003.compress.jplace PMPROK0000
3.trim.jplace
Fatal error: exception Gtree.Lacking_bark(1325)
Raised at file "pplacer_src/gtree.ml", line 38, characters 23-40
Called from file "pplacer_src/gtree.ml", line 43, characters 6-21
Called from file "pplacer_src/kr_distance.ml", line 211, characters 6-32
Called from file "pplacer_src/kr_distance.ml", line 103, characters 4-427
Called from file "pplacer_src/kr_distance.ml", line 222, characters 2-289
Called from file "pplacer_src/mass_compress.ml", line 11, characters 16-76
Called from file "src/batList.ml", line 103, characters 17-20
Called from file "pplacer_src/mass_compress.ml", line 8, characters 2-1097
Called from file "pplacer_src/guppy_compress.ml", line 28, characters 6-69
Called from file "common_src/subcommand.ml", line 207, characters 6-22
Called from file "common_src/ppatteries.ml", line 131, characters 6-10
Re-raised at file "common_src/ppatteries.ml", line 124, characters 21-193
Called from file "pplacer_src/guppy.ml", line 2, characters 35-224