matsen/pplacer — Issue #171: make summary information available from convexify
Author: matsen
Created: 2011-10-25 14:41:52+00:00
State: open
Labels: top-ish

I would like the following information to be easily accessible after a convexify run:

For a given node that was uncolored, how many nodes with that taxid were uncolored? How many leaves of that taxid are there in the tree?

This issue doesn't necessarily need new OCaml; it seems like some SQL would knit this together nicely.

Future warning: we will probably want to use the results of this sort of analysis to do taxonomic renaming, probably in OCaml.