abakan/ProDy — Issue #74: Rename functions with long names
Author: abakan
Created: 2011-10-18 21:27:55+00:00
State: open

Name change is proposed for the following functions:

applyBiomolecularTransformations -> buildBiomolecules
assignSecondaryStructure -> assignSecondary

Rename the functions, but implement wrappers with the old name. The wrappers should issue warning logs noting the name changes and state the version name in which the old function name will disappear.