ModelSEED/Model-SEED-core — Issue #52: ModelDB-sqlite.tgz missing from http://bioseed.mcs.anl.gov/~devoid/
Author: cshenry
Created: 2011-10-16 03:36:01+00:00
State: open

Thanks for the heads up. I ran into a little hiccup during the installation. When trying to load the sqlite version of the ModelDB, the installation does the following:

echo "Downloading biochemistry database to $INSTALL_DIE/data/ModelDB/";

curl http://bioseed.mcs.anl.gov/~devoid/ModelDB-sqlite.tgz > $TMPFILE;

tar -xzf $TMPFILE -C $DATA_DIR;

The problem is that the ModelDB-sqlite.tgz does not exist on in the devoid directory. I dug around a bit and found an sqlite version of the ModelDB in the TestDB.tgz file. Is that a working sqlite version of the DB? Would recommend that I work with the sqlite version or quit faffing about and use the MySQL version?
Regards,
James