joey711/phyloseq — Issue #34: Add importer for AmpliconNoise/Perseus pipeline
Author: joey711
Created: 2011-10-14 02:31:21+00:00
State: open
Labels: Feature

This particular pipeline is described recently in BMC Bioinformatics:

http://www.biomedcentral.com/1471-2105/12/38

The projects themselves appear to be hosted on google-code:

http://code.google.com/p/ampliconnoise/

And example data is available at:

http://userweb.eng.gla.ac.uk/christopher.quince/Data/AmpliconNoise.html

However, example output is not provided, nor a formal description of the file formats returned. Would be nice to see this available somewhere. Any comments or suggestions much appreciated.