jefferis/FruCloneClustering — comment on commit 12faea3ded702f749f1c743fe9b80aa9106a7553
File:  line 0
By jefferis:

readpic now respects the standard matlab conventions for image loading (like imgread). readpic is included in the MatlabSupport repository (so make sure that you have that up to date on your coding machine) and that you don't have an old version lurking.

The functions ind2coord /coord2ind can convert to/from pixel indices to xyz coords.
ind2coord in particular has more details about how to deal with matlab (and other) conventions for axis ordering.