Daftar genom arkea yang sudah diurutkan

Daftar genom arkea yang sudah diurutkan ini berisi semua arkea yang dikenal memiliki sekuens genom lengkap yang tersedia untuk umum yang telah dirakit, dijelaskan dan disimpan di database publik. Methanococcus jannaschii adalah arkea pertama yang genomnya disekuensing, pada tahun 1996.

Saat ini di daftar ini ada 39 genom milik spesies crenarchaeota, 105 milik euryarchaeota, 1 genom milik Korarchaeota dan ke Nanoarchaeota, 3 milik Thaumarchaeota dan 1 genom yang tergabung ke Archaea tidak terklasifikasi, dengan total 150 genom arkea.

 Crenarchaeota 

 Acidilobales 
SpesiesStrainBase PairsGenesReferenceGenBank identifierPublication yearAcidilobus saccharovorans345-151,496,0001,547CP0017422010

 Desulforococcales 
SpesiesStrainBase PairsGenesReferenceGenBank identifierPublication yearAeropyrum pernixK11,669,6952,694NC_000854 (NCBI Reference Sequence)1999Desulfurococcus kamchatkensis1221n1,365,0001,521CP0011402009Hyperthermus butylicusDSM 54561,667,0001,669CP0004932007Ignicoccus hospitalisKIN4/I, DSM 183861,297,0001,496CP0008162008Ignisphaera aggregansAQ1.S1, DSM 172301,875,0002,042CP0020982010Pyrolobus fumarii1A, DSM 112041,843,0002,038CP0028382011Staphylothermus hellenicusP8, DSM 127101,580,0001,716CP0020512011Staphylothermus marinusF1, DSM 36391,570,0001,659CP0005752011Thermosphaera aggregansM11TL, DSM 114861,316,0001,457CP0019392010

 Sulfolobales 
SpesiesStrainBase PairsGenesReferenceGenBank identifierPublication yearAcidianus hospitalisW12,137,0002,424CP0025352011Metallosphaera cuprinaAr-41,840,0002,077CP0026562011Metallosphaera sedulaDSM 53482,191,0002,347CP0006822008Sulfolobus acidocaldariusDSM 6392,225,9592,223CP0000772005Sulfolobus islandicusHVE10/42,655,000CP0024262011Sulfolobus islandicusL.D.8.52,722,0002,996Chromosome CP001731
Plasmid pLD8501 CP0017322009Sulfolobus islandicusL.S.2.152,736,0003,068CP0013992009Sulfolobus islandicusM.14.252,608,0002,900CP0014002009Sulfolobus islandicusM.16.272,692,0002,956CP0014012009Sulfolobus islandicusM.16.42,586,0002,869CP0014022009Sulfolobus islandicusREY15A2,522,000CP0024252011Sulfolobus islandicusY.G.57.142,702,0003,079CP0014032009Sulfolobus islandicusY.N.15.512,812,0003,318Chromosome CP001404
Plasmid pYN01 CP0014052009Sulfolobus islandicusLAL14/12,465,1772,601CP0039282013Sulfolobus solfataricusP22,992,2452,995AE0066412001Sulfolobus solfataricus98/22,668,0002,728DOE Joint Genome InstituteCP0018002009Sulfolobus tokodaii72,694,7652,826BA0000232001

 Thermoproteales 
SpesiesStrainBase PairsGenesReferenceGenBank identifierPublication yearCaldivirga maquilingensisIC-1672,077,0002,011DOE Joint Genome InstituteCP0008522007Pyrobaculum aerophilumIM22,222,4302,605AE0094412002Pyrobaculum arsenaticumPZ6, DSM 135142,121,0002,410DOE Joint Genome InstituteCP0006602007Pyrobaculum calidifontisJCM 115482,009,0002,213DOE Joint Genome InstituteCP0005612007Pyrobaculum islandicumDSM 41841,826,0002,063DOE Joint Genome InstituteCP0005042006Pyrobaculum sp. 1860UnpublishedCP0030982011Thermofilum pendensHrk 51,781,0001,930Chromosome CP000505
Plasmid pTPEN01 CP0005062008Thermoproteus neutrophilusV24Sta1,769,0002,053DOE Joint Genome InstituteCP0010142008Thermoproteus tenaxKra11,841,0002,100FN8698592011Thermoproteus uzoniensis768-201,936,0002,229CP0025902011Vulcanisaeta distributaDSM 144292,374,0002,592CP0021002010Vulcanisaeta moutnovskia768-282,298,0002,393CP0025292011

 Euryarchaeota 

 Archaeoglobi 
SpesiesStrainBase PairsGenesReferenceGenBank identifierPublication yearArchaeoglobus fulgidusDSM43042,178,4002,407AE0007821997Archaeoglobus veneficusSNP6, DSM 111951,901,0002,194DOE Joint Genome InstituteCP0025882011Archaeoglobus profundusAv18, DSM 56311,563,0001,911Chromosome CP001857
Plasmid pArcpr01 CP0018582010Ferroglobus placidusAEDII12DO, DSM 106422,196,0002,622CP0018992011

 Halobacteria 
SpesiesStrainBase PairsGenesReferenceGenBank identifierPublication yearHalalkalicoccus jeotgaliB3, DSM 187963,690,0003925Chromosome I CP002062
Plasmid 1 CP002063
Plasmid 2 CP002064
Plasmid 3 CP002065
Plasmid 4 CP002066
Plasmid 5 CP002067
Plasmid 6 CP0020682010Haloarcula hispanicaCGMCC 1.20493,484,0003,561Chromosome I CP002921
Chromosome II CP002922
Plasmid pHH400 CP0029232011Haloarcula marismortuiATCC 430493,131,7243,131Chromosome I AY596297
Chromosome II AY596298
Plasmid pNG100 AY596290
Plasmid pNG200 AY596291
Plasmid pNG300 AY596292
Plasmid pNG400 AY596293
Plasmid pNG500 AY596294
Plasmid pNG600 AY596295
Plasmid pNG700 AY5962962004Halobacterium salinarumR1, DSM 6712,000,0002,801Chromosome NC_010364
Plasmid PHS1 NC_010366
Plasmid PHS2 NC_010369
Plasmid PHS3 NC_010368
Plasmid PHS4 NC_0103672008Halobacterium speciesNRC-12,014,2392,058Chromosome NC_002607
Plasmid pNRC100 NC_002607
Plasmid pNRC200 NC_0026082000Halobiforma lacisalsiAJ5, JCM 129834,320,0004,682AGFZ000000002011Haloferax volcaniiDS2Chromosome CP001956
Plasmid pHV1 CP001957
Plasmid pHV2 CP001954
Plasmid pHV3 CP001953
Plasmid pHV4 CP0019552010Halogeometricum borinquensePR3, DSM 115513,920,0004,059Chromosome CP001690
Plasmid pHBOR01 CP001691
Plasmid pHBOR02 CP001692
Plasmid pHBOR03 CP001693
Plasmid pHBOR04 CP001694
Plasmid pHBOR05 CP0016952009Halomicrobium mukohataeiarg-2, DSM 122863,332,0003,475Chromosome CP001688
Plasmid pHmuk01  CP0016892009Halopiger xanaduensisSH-63,668,0003,685DOE Joint Genome InstituteChromosome CP002839
Plasmid pHALXA01 CP002840
Plasmid pHALXA02 CP002841
Plasmid pHALXA03 CP0028422011 (Chromosome)Haloquadratum walsbyiC23, DSM 168543,148,000Chromosome FR746099
Plasmid PL6A FR746101
Plasmid PL6B FR746102
Plasmid PL100 FR7461002011Haloquadratum walsbyiHBSQ001, DSM 167903,132,0002,914Chromosome AM180088
Plasmid PL47 AM1800892006Halorhabdus tiamateaSARL4B3,840,0004,034AFNT000000002011Halorhabdus utahensisAX-2, DSM 129403116 Kb3076CP0016872009Halorubrum lacusprofundiATCC 492394,300,0003,725DOE Joint Genome InstituteChromosome 1 CP001365
Chromosome 2 CP001366
Plasmid pHLAC01 CP0013672009 (Chromosomes 1 and 2)Haloterrigena turkmenicaVKM B-1734, DSM 55115,440,0005,351Chromosome CP001860
Plasmid pHTUR01 CP001861
Plasmid pHTUR02 CP001862
Plasmid pHTUR03 CP001863
Plasmid pHTUR04 CP001864
Plasmid pHTUR05 CP001865
Plasmid pHTUR06 CP0018662010Natrialba asiaticaATCC 700177Survey2004Natrialba magadiiATCC 430993,751,0004,364DOE Joint Genome InstituteCP0019322010Natronomonas pharaonisDSM21602,595,2212,675Chromosome CR936257
Plasmid PL131 CR936258
Plasmid PL23 CR9362592005

 Methanobacteria 
SpesiesStrainBase PairsGenesReferenceGenBank identifierPublication yearMethanobacterium sp. AL-212,583,000DOE Joint Genome Institute,Univ of Illinois at Urbana-ChampaignCP0025512011Methanobacterium sp. SWAN-12,546,0002,500DOE Joint Genome Institute,Univ Illinois at Urbana-ChampaignCP0027722011Methanobacterium thermoautotrophicumdelta-H1,751,3771,869AE0006661997Methanobrevibacter ruminantiumM12,937,0002,283CP0017192010Methanobrevibacter smithiiDSM 23751,704,0001,748Washington UniversityABYW000000002008Methanobrevibacter smithiiF1, DSM 23741,707,0001,749Washington UniversityABYV000000002010Methanobrevibacter smithiiPS, ATCC 350611,853,0001,841CP0006782007Methanobrevibacter smithiiTS94A1,889,0001,808AELU000000002011Methanobrevibacter smithiiTS94B1,886,0001,856AELV000000002011Methanobrevibacter smithiiTS94C1,910,0001,812AELW000000002011Methanobrevibacter smithiiTS95A1,992,0001,961AELX000000002011Methanobrevibacter smithiiTS95B1,972,0001,895AELY000000002011Methanobrevibacter smithiiTS95C1,978,0001,874AELZ000000002011Methanobrevibacter smithiiTS95D2,011,0001,860AEMA000000002011Methanobrevibacter smithiiTS96A1,975,0001,852AEMB000000002011Methanobrevibacter smithiiTS96B1,869,0001,742AEMC000000002011Methanobrevibacter smithiiTS96C1,818,0001,764AEMD000000002011Methanobrevibacter smithiiTS145A1,782,0001,786AEKU000000002011Methanobrevibacter smithiiTS145B1,797,0001,880AELL000000002011Methanobrevibacter smithiiTS146A1,792,0001,823AELM000000002011Methanobrevibacter smithiiTS146B1,794,0001,814AELN000000002011Methanobrevibacter smithiiTS146C1,947,0002,355AELO000000002011Methanobrevibacter smithiiTS146D1,713,0001,693AELP000000002011Methanobrevibacter smithiiTS146E1,952,0001,887AELQ000000002011Methanobrevibacter smithiiTS147A2,008,0001,969AELR000000002011Methanobrevibacter smithiiTS147B1,965,0001,911AELS000000002011Methanobrevibacter smithiiTS147C1,973,0002,014AELT000000002011Methanosphaera stadtmanaeDSM 30911,767,4031,534CP0001022005Methanothermobacter marburgensisMarburg DSM 21331,634,0001,806CP0017102010Methanothermus fervidusV24S, DSM 20881,243,0001,361CP0022782010

 Methanococci 
SpesiesStrainBase PairsGenesReferenceGenBank identifierPublication yearMethanocaldococcus fervensAG861,485,0001,663DOE Joint Genome InstituteChromosome CP001696
Plasmid pMEFER01 CP0016972009 (Chromosome)Methanocaldococcus infernusME1,328,0001,513DOE Joint Genome InstituteCP0020092010Methanocaldococcus jannaschiiDSM 26611,664,9701,715Chromosome: L77117
Large plasmid: L77118
Small plasmid: L771191996Methanocaldococcus vulcaniusM7, DSM 120941,746,0001,808DOE Joint Genome InstituteChromosome CP001787
Plasmid pMETVU01 CP001788
Plasmid pMETVU02 CP0017892009Methanocaldococcus sp. FS406-221,760,0001,893DOE Joint Genome InstituteChromosome CP001901
Plasmid pFS01 CP0019022010 (Chromosome)Methanococcus aeolicusNankai-31,569,0001,554DOE Joint Genome InstituteCP0007432007Methanococcus maripaludisC51,780,0001,896DOE Joint Genome InstituteCP0006092007Methanococcus maripaludisC61,744,0001,874DOE Joint Genome InstituteCP0008672007Methanococcus maripaludisC71,772,0001,858DOE Joint Genome InstituteCP0007452007Methanococcus maripaludisS21,661,1371,722NC_005791 (NCBI Reference Sequence)2004Methanococcus maripaludisX11,746,0001,892CP0029132011Methanococcus vannieliiSB1,720,0001,755DOE Joint Genome InstituteCP0007422007Methanococcus voltaeA31,936,0001,768DOE Joint Genome InstituteCP0020572010Methanothermococcus okinawensisIH11,662,0001,662DOE Joint Genome InstituteChromosome CP002792
Plasmid pMETOK01 CP0027932011 (Chromosome)Methanotorris igneusKol5, DSM 56661,854,0001,843DOE Joint Genome InstituteCP0027372011

 Methanomicrobia 
SpesiesStrainBase PairsGenesReferenceGenBank identifierPublication yearCandidatus Methanoregula boonei6A82,542,0002,518DOE Joint Genome Institute"Candidatus Methanoregula boonei 6A8". http://genome.jgi-psf.org/metbo/metbo.info.htmlCP0007802007Methanocella sp. Rice Cluster I (RC-I)MRE503,179,9163103Genome sequence, then taxonomic placementAM1141932005Methanocella paludicolaSANAE2,957,6353004AP0115322011Methanocella conradiiHZ2541,316,3802512CP0032432012Methanococcoides burtoniiDSM62422,575,0322,273CP0003002009Methanocorpusculum labreanumZ1,804,0001,830CP0005592009Methanoculleus marisnigriJR1, DSM 14982,478,0002,560CP0005622009Methanohalobium evestigatumZ-73032,406,2322,254DOE Joint Genome Institutehttp://genome.jgi-psf.org/metev/metev.info.htmlChromosome: CP002069
Plasmid pMETEV01: CP0020702010 (Chromosome)Methanohalophilus mahiiSLP, DSM 52192,012,0002,095CP0019942010Methanoplanus petroleariusSEBR 4847, DSM 115712,843,0002,881CP0021172011Methanosalsum zhilinaeWeN5, DSM 40172,138,0002,086CP0021012010Methanosaeta conciliiGP-63,008,000CP0025652010Methanosaeta harundinacea6Ac2,559,000CP0031172011Methanosaeta thermophilaPT1,879,0001,785DOE Joint Genome InstituteCP0004772006Methanosarcina acetivoransC2A5,751,4924,540AE0102992002Methanosarcina barkeriFusaro, DSM 8044,837,4083,607Chromosome CP000099
Plasmid 1 CP0000982006 (Chromosome)Methanosarcina mazeiGo14,096,3453,371AE0083842002Methanosphaerula palustrisE1-9c, DSM 199582,922,0002,859DOE Joint Genome InstituteCP0013382008Methanospirillum hungateiJF-13,544,7383,139DOE Joint Genome InstituteCP0002542006

 Methanopyri 
SpesiesStrainBase PairsGenesReferenceGenBank identifierPublication yearMethanopyrus kandleriAV191,694,9691,691AE0094392002

 Thermococci 
SpesiesStrainBase PairsGenesReferenceGenBank identifierPublication yearPyrococcus abyssiGE51,765,1181,784NC_000868 (NCBI Reference Sequence)2000Pyrococcus furiosusDSM 36381,908,2562,065AE0099501999Pyrococcus horikoshiiOT31,738,5052,061NC_000961 (NCBI Reference Sequence)1998Pyrococcus sp. NA21,861,0001,984CP0026702011Pyrococcus yayanosiiCH11,716,0001,952CP0027792011Thermococcus barophilusMP, DSM 118362,010,0002,196CP0023722011Thermococcus gammatoleransEJ32,045,0002,206CP0013982009Thermococcus kodakaraensisKOD12,088,7372,306AP0068782005Thermococcus onnurineusNA11,847,0002,027NC_011529 (NCBI Reference Sequence)2008Thermococcus sibiricusMM 7391,845,0002,085CP0014632009Thermococcus sp. 45572,011,0002,181CP0029202011Thermococcus sp. AM42,086,0002,279CP0029522011

 Thermoplasmata 
SpesiesStrainBase PairsGenesReferenceGenBank identifierPublication yearFerroplasma acidarmanusFer11,865,0001,742AABC000000002007Picrophilus torridusDSM 97901,545,8951,535AE0172612004Thermoplasma acidophilumDSM 17281,564,9061,478NC_002578 (NCBI Reference Sequence)2000Thermoplasma volcaniumGSS11,584,8041,526NC_002689 (NCBI Reference Sequence)2000

 Unclassified Euryarchaeota 
SpesiesStrainBase PairsGenesReferenceGenBank identifierPublication yearAciduliprofundum booneiT4691,486,0001,587DOE Joint Genome InstituteCP0019412010

 Korarchaeota 
SpesiesStrainBase PairsGenesReferenceGenBank identifierPublication yearCandidatus Korarchaeum cryptofilumOPF81,590,0001,661CP0009682008

 Nanoarchaeota 
SpesiesStrainBase PairsGenesReferenceGenBank identifierPublication yearNanoarchaeum equitansKin4-M490,885536AE0171992003

 Thaumarchaeota 

 Cenarchaeales 
SpesiesStrainBase PairsGenesReferenceGenBank identifierPublication yearCenarchaeum symbiosumA2,045,0002,066DP0002382006

 Nitrosopumilales 
SpesiesStrainBase PairsGenesReferenceGenBank identifierPublication yearCandidatus Nitrosoarchaeum limniaSFB11,769,0002,171AEGP000000002011Nitrosopumilus maritimusSCM11,645,0001,842CP0008662010

 Unclassified Archaea 
SpesiesStrainBase PairsGenesReferenceGenBank identifierPublication yearhalophilic archaeon sp. DL31UnpublishedCP0029882011

 Lihat pula 
 Genome project
 Human microbiome project
 Lists of sequenced genomes

 Referensi 

 Pranala luar 
 GOLD:Genomes OnLine Database v 2.0
 SUPERFAMILY comparative genomics database Includes genomes of completely sequenced archaea, and sophisticated datamining plus visualisation tools for analysis

Kategori:Arkea
archaeal genomes
Kategori:Daftar bertopik biologi