- picture Co-translational ER protein targeting

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- picture Co-translational ER protein targeting
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bet | 6/13 | Sana | 16.05.2024 | Hajmi | 1,48 Mb. | | #237391 |
Bog'liq Structure and function of biological membranes.2.2. 1- picture Co-translational ER protein targeting.
Co-translational targeting is the dominant mechanism for protein delivery to the ER in higher eukaryotes, whereas yeast and prokaryotes favour post-translational targeting, whereby proteins are delivered to the ER after completion of synthesis. Post-translational targeting also occurs in higher eukaryotes, often when a membrane protein is so small that the signal sequence does not emerge until the whole protein has been synthesized. Post-translational targeting can be carried out both by SRP-dependent and by SRP-independent mechanisms.
Structure and function of membrane proteins
Membrane-spanning proteins are diverse in structure and function. They can be constructed of α-helices or from β-barrels. The β-barrel membrane proteins often function as pores, with hydrophobic amino acids facing out into the bilayer. In addition, there are other non-spanning proteins which associate with the bilayer, often using a hydrophobic anchor. Here we shall focus on the α-helical membrane proteins. These proteins have at least one α-helical hydrophobic stretch of amino acids, around 20 residues in length, which corresponds to around 30 Å (the thickness of an average phospholipid bilayer). If an α-helical membrane protein spans the membrane more than once, it will have more than one of these hydrophobic sections. For example, the Ca2+-ATPase of the ER and sarcoplasmic reticulum (SR) spans the membrane 10 times, so it has 10 hydrophobic stretches of around 20 amino acids each.
Membrane proteins control what enters and leaves the cell
A vital class of membrane proteins are those involved in active or passive transport of materials across the cell membrane or other subcellular membranes surrounding organelles. For a cell or an organism to survive, it is crucial that the right substances enter cells (e.g. nutrients) and the right substances are transported out of them (e.g. toxins).
Passive and active transport Molecules can cross biological membranes in several different ways depending on their concentration on either side of the membrane, their size and their charge. Some molecules, including water, can simply diffuse through the membrane without assistance. However, large molecules or charged molecules cannot cross membranes by simple diffusion. Charged molecules such as ions can move through channels passively, down electrochemical gradients. This movement is described as ‘downhill’, as the ions or molecules travel from an area of high concentration to an area of low concentration. This requires channel proteins but no energy input. Passive transport can also be mediated by carrier proteins that carry specific molecules such as amino acids down concentration gradients, again without any requirement for energy. Active transport moves species against concentration gradients and requires energy, which is obtained from ATP, from light, or from the downhill movement of a second type of molecule or ion within the same transporter.
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