At2g06050.2/PDB

&&&&&&&&&&&&&&&&&&&& BEGIN /usr/local/www/html/proteins/Compiled_Programs/WYRM/PyMOL_highlight_conserved_residues &&&&&&&&&&&&&&&&&&&&
Successfully read 2 file paths from WYRM_file_paths.txt
generic_input /usr/local/www/html/proteins/workspace/
generic_output /usr/local/www/html/proteins/htdocs/results/
======================================================
Sequence file type = 3
Sequence type = 3
Got here 1
Got here 2
Got here 3
Sequence 1
Got here 3
Got here 4
Got here 3
Got here 4
Got here 3
Got here 4
Got here 3
Got here 4
Got here 3
Got here 4
Got here 3
Got here 4
Got here 3
Sequence 2
Got here 3
Got here 4
Got here 3
Got here 4
Got here 3
Got here 4
Got here 3
Got here 4
Got here 3
Got here 4
Got here 3
Got here 4
Read 2 amino_acid sequences from PIR Sequence file /usr/local/www/html/proteins/workspace/At2g06050-1q45A.pir.txt
======================================================
Assigned types to 391 residues in Sequence 2-06050-391, 0 remain unknown
Assigned types to 391 residues in Sequence 1q45A, 0 remain unknown
======================================================
Successfully read 576 entries for residue match scoring matrix /usr/local/www/html/proteins/workspace/BLOSUM62.dat
Read the residue match scoring matrix /usr/local/www/html/proteins/workspace/BLOSUM62.dat
======================================================
Translated sequence file At2g06050-1q45A.pir.txt into sequence alignment.
======================================================
>1Q45.pdb Made from 5634 ATOM records in 1Q45.pdb
SNETLFSSYKMGRFDLSHRVVLAPMTRCRALNGVPNAALAEYYAQRTTPG
GFLISEGTMVSPGSAGFPHVPGIYSDEQVEAWKQVVEAVHAKGGFIFCQL
WHVGRASHAVYQPNGGSPISSTNKPISENRWRVLLPDGSHVKYPKPRALE
ASEIPRVVEDYCLSALNAIRAGFDGIEIHGAHGYLIDQFLKDGINDRTDQ
YGGSIANRCRFLKQVVEGVVSAIGASKVGVRVSPAIDHLDATDSDPLSLG
LAVVGMLNKLQGVNGSKLAYLHVTQPREEEAKLMKSLRMAYNGTFMSSGG
FNKELGMQAVQQGDADLVSYGRLFIANPDLVSRFKIDGELNKYNRKTFYT
QDPVVGYTDYPFLAPNETLFSSYKMGRFDLSHRVVLAPMTRCRALNGVPN
AALAEYYAQRTTPGGFLISEGTMVSPGSAGFPHVPGIYSDEQVEAWKQVV
EAVHAKGGFIFCQLWHVGRASHAVYQPNGGSPISSTNKPISENRWRVLLP
DGSHVKYPKPRALEASEIPRVVEDYCLSALNAIRAGFDGIEIHGAHGYLI
DQFLKDGINDRTDQYGGSIANRCRFLKQVVEGVVSAIGASKVGVRVSPAI
DHLDATDSDPLSLGLAVVGMLNKLQGVNGSKLAYLHVTQPRYHAYDEEEA
KLMKSLRMAYNGTFMSSGGFNKELGMQAVQQGDADLVSYGRLFIANPDLV
SRFKIDGELNKYNRKTFYTQDPVVGYTDYPFL
======================================================
Best alignment:
1Q45.pdb 366 NETLFSSYKMGRFDLSHRVVLAPMTRCRALNGVPNAALAEYYAQRTTPGG 415
 NETLFSSYKMGRFDLSHRVVLAPMTRCRALNGVPNAALAEYYAQRTTPGG
2-06050-391 9 NETLFSSYKMGRFDLSHRVVLAPMTRCRALNGVPNAALAEYYAQRTTPGG 58
1Q45.pdb 416 FLISEGTMVSPGSAGFPHVPGIYSDEQVEAWKQVVEAVHAKGGFIFCQLW 465
 FLISEGTMVSPGSAGFPHVPGIYSDEQVEAWKQVVEAVHAKGGFIFCQLW
2-06050-391 59 FLISEGTMVSPGSAGFPHVPGIYSDEQVEAWKQVVEAVHAKGGFIFCQLW 108
1Q45.pdb 466 HVGRASHAVYQPNGGSPISSTNKPISENRWRVLLPDGSHVKYPKPRALEA 515
 HVGRASHAVYQPNGGSPISSTNKPISENRWRVLLPDGSHVKYPKPRALEA
2-06050-391 109 HVGRASHAVYQPNGGSPISSTNKPISENRWRVLLPDGSHVKYPKPRALEA 158
1Q45.pdb 516 SEIPRVVEDYCLSALNAIRAGFDGIEIHGAHGYLIDQFLKDGINDRTDQY 565
 SEIPRVVEDYCLSALNAIRAGFDGIEIHGAHGYLIDQFLKDGINDRTDQY
2-06050-391 159 SEIPRVVEDYCLSALNAIRAGFDGIEIHGAHGYLIDQFLKDGINDRTDQY 208
1Q45.pdb 566 GGSIANRCRFLKQVVEGVVSAIGASKVGVRVSPAIDHLDATDSDPLSLGL 615
 GGSIANRCRFLKQVVEGVVSAIGASKVGVRVSPAIDHLDATDSDPLSLGL
2-06050-391 209 GGSIANRCRFLKQVVEGVVSAIGASKVGVRVSPAIDHLDATDSDPLSLGL 258
1Q45.pdb 616 AVVGMLNKLQGVNGSKLAYLHVTQPRYHAY----------DEEEAKLMKS 655
 AVVGMLNKLQGVNGSKLAYLHVTQPRYHAY DEEEAKLMKS
2-06050-391 259 AVVGMLNKLQGVNGSKLAYLHVTQPRYHAYGQTESGRQGSDEEEAKLMKS 308
1Q45.pdb 656 LRMAYNGTFMSSGGFNKELGMQAVQQGDADLVSYGRLFIANPDLVSRFKI 705
 LRMAYNGTFMSSGGFNKELGMQAVQQGDADLVSYGRLFIANPDLVSRFKI
2-06050-391 309 LRMAYNGTFMSSGGFNKELGMQAVQQGDADLVSYGRLFIANPDLVSRFKI 358
1Q45.pdb 706 DGELNKYNRKTFYTQDPVVGYTDYPFL 732
 DGELNKYNRKTFYTQDPVVGYTDYPFL
2-06050-391 359 DGELNKYNRKTFYTQDPVVGYTDYPFL 385
======================================================
Highlighted IDENTICAL residue ASN 9 index1 366 path 9 %Seq 100.00
Highlighted IDENTICAL residue GLU 10 index1 367 path 10 %Seq 100.00
Highlighted IDENTICAL residue THR 11 index1 368 path 11 %Seq 100.00
Highlighted IDENTICAL residue LEU 12 index1 369 path 12 %Seq 100.00
Highlighted IDENTICAL residue PHE 13 index1 370 path 13 %Seq 100.00
Highlighted IDENTICAL residue SER 14 index1 371 path 14 %Seq 100.00
Highlighted IDENTICAL residue SER 15 index1 372 path 15 %Seq 100.00
Highlighted IDENTICAL residue TYR 16 index1 373 path 16 %Seq 100.00
Highlighted IDENTICAL residue LYS 17 index1 374 path 17 %Seq 100.00
Highlighted IDENTICAL residue MET 18 index1 375 path 18 %Seq 100.00
Highlighted IDENTICAL residue GLY 19 index1 376 path 19 %Seq 100.00
Highlighted IDENTICAL residue ARG 20 index1 377 path 20 %Seq 100.00
Highlighted IDENTICAL residue PHE 21 index1 378 path 21 %Seq 100.00
Highlighted IDENTICAL residue ASP 22 index1 379 path 22 %Seq 100.00
Highlighted IDENTICAL residue LEU 23 index1 380 path 23 %Seq 100.00
Highlighted IDENTICAL residue SER 24 index1 381 path 24 %Seq 100.00
Highlighted IDENTICAL residue HIS 25 index1 382 path 25 %Seq 100.00
Highlighted IDENTICAL residue ARG 26 index1 383 path 26 %Seq 100.00
Highlighted IDENTICAL residue VAL 27 index1 384 path 27 %Seq 100.00
Highlighted IDENTICAL residue VAL 28 index1 385 path 28 %Seq 100.00
Highlighted IDENTICAL residue LEU 29 index1 386 path 29 %Seq 100.00
Highlighted IDENTICAL residue ALA 30 index1 387 path 30 %Seq 100.00
Highlighted IDENTICAL residue PRO 31 index1 388 path 31 %Seq 100.00
Highlighted IDENTICAL residue MET 32 index1 389 path 32 %Seq 100.00
Highlighted IDENTICAL residue THR 33 index1 390 path 33 %Seq 100.00
Highlighted IDENTICAL residue ARG 34 index1 391 path 34 %Seq 100.00
Highlighted IDENTICAL residue CYS 35 index1 392 path 35 %Seq 100.00
Highlighted IDENTICAL residue ARG 36 index1 393 path 36 %Seq 100.00
Highlighted IDENTICAL residue ALA 37 index1 394 path 37 %Seq 100.00
Highlighted IDENTICAL residue LEU 38 index1 395 path 38 %Seq 100.00
Highlighted IDENTICAL residue ASN 39 index1 396 path 39 %Seq 100.00
Highlighted IDENTICAL residue GLY 40 index1 397 path 40 %Seq 100.00
Highlighted IDENTICAL residue VAL 41 index1 398 path 41 %Seq 100.00
Highlighted IDENTICAL residue PRO 42 index1 399 path 42 %Seq 100.00
Highlighted IDENTICAL residue ASN 43 index1 400 path 43 %Seq 100.00
Highlighted IDENTICAL residue ALA 44 index1 401 path 44 %Seq 100.00
Highlighted IDENTICAL residue ALA 45 index1 402 path 45 %Seq 100.00
Highlighted IDENTICAL residue LEU 46 index1 403 path 46 %Seq 100.00
Highlighted IDENTICAL residue ALA 47 index1 404 path 47 %Seq 100.00
Highlighted IDENTICAL residue GLU 48 index1 405 path 48 %Seq 100.00
Highlighted IDENTICAL residue TYR 49 index1 406 path 49 %Seq 100.00
Highlighted IDENTICAL residue TYR 50 index1 407 path 50 %Seq 100.00
Highlighted IDENTICAL residue ALA 51 index1 408 path 51 %Seq 100.00
Highlighted IDENTICAL residue GLN 52 index1 409 path 52 %Seq 100.00
Highlighted IDENTICAL residue ARG 53 index1 410 path 53 %Seq 100.00
Highlighted IDENTICAL residue THR 54 index1 411 path 54 %Seq 100.00
Highlighted IDENTICAL residue THR 55 index1 412 path 55 %Seq 100.00
Highlighted IDENTICAL residue PRO 56 index1 413 path 56 %Seq 100.00
Highlighted IDENTICAL residue GLY 57 index1 414 path 57 %Seq 100.00
Highlighted IDENTICAL residue GLY 58 index1 415 path 58 %Seq 100.00
Highlighted IDENTICAL residue PHE 59 index1 416 path 59 %Seq 100.00
Highlighted IDENTICAL residue LEU 60 index1 417 path 60 %Seq 100.00
Highlighted IDENTICAL residue ILE 61 index1 418 path 61 %Seq 100.00
Highlighted IDENTICAL residue SER 62 index1 419 path 62 %Seq 100.00
Highlighted IDENTICAL residue GLU 63 index1 420 path 63 %Seq 100.00
Highlighted IDENTICAL residue GLY 64 index1 421 path 64 %Seq 100.00
Highlighted IDENTICAL residue THR 65 index1 422 path 65 %Seq 100.00
Highlighted IDENTICAL residue MET 66 index1 423 path 66 %Seq 100.00
Highlighted IDENTICAL residue VAL 67 index1 424 path 67 %Seq 100.00
Highlighted IDENTICAL residue SER 68 index1 425 path 68 %Seq 100.00
Highlighted IDENTICAL residue PRO 69 index1 426 path 69 %Seq 100.00
Highlighted IDENTICAL residue GLY 70 index1 427 path 70 %Seq 100.00
Highlighted IDENTICAL residue SER 71 index1 428 path 71 %Seq 100.00
Highlighted IDENTICAL residue ALA 72 index1 429 path 72 %Seq 100.00
Highlighted IDENTICAL residue GLY 73 index1 430 path 73 %Seq 100.00
Highlighted IDENTICAL residue PHE 74 index1 431 path 74 %Seq 100.00
Highlighted IDENTICAL residue PRO 75 index1 432 path 75 %Seq 100.00
Highlighted IDENTICAL residue HIS 76 index1 433 path 76 %Seq 100.00
Highlighted IDENTICAL residue VAL 77 index1 434 path 77 %Seq 100.00
Highlighted IDENTICAL residue PRO 78 index1 435 path 78 %Seq 100.00
Highlighted IDENTICAL residue GLY 79 index1 436 path 79 %Seq 100.00
Highlighted IDENTICAL residue ILE 80 index1 437 path 80 %Seq 100.00
Highlighted IDENTICAL residue TYR 81 index1 438 path 81 %Seq 100.00
Highlighted IDENTICAL residue SER 82 index1 439 path 82 %Seq 100.00
Highlighted IDENTICAL residue ASP 83 index1 440 path 83 %Seq 100.00
Highlighted IDENTICAL residue GLU 84 index1 441 path 84 %Seq 100.00
Highlighted IDENTICAL residue GLN 85 index1 442 path 85 %Seq 100.00
Highlighted IDENTICAL residue VAL 86 index1 443 path 86 %Seq 100.00
Highlighted IDENTICAL residue GLU 87 index1 444 path 87 %Seq 100.00
Highlighted IDENTICAL residue ALA 88 index1 445 path 88 %Seq 100.00
Highlighted IDENTICAL residue TRP 89 index1 446 path 89 %Seq 100.00
Highlighted IDENTICAL residue LYS 90 index1 447 path 90 %Seq 100.00
Highlighted IDENTICAL residue GLN 91 index1 448 path 91 %Seq 100.00
Highlighted IDENTICAL residue VAL 92 index1 449 path 92 %Seq 100.00
Highlighted IDENTICAL residue VAL 93 index1 450 path 93 %Seq 100.00
Highlighted IDENTICAL residue GLU 94 index1 451 path 94 %Seq 100.00
Highlighted IDENTICAL residue ALA 95 index1 452 path 95 %Seq 100.00
Highlighted IDENTICAL residue VAL 96 index1 453 path 96 %Seq 100.00
Highlighted IDENTICAL residue HIS 97 index1 454 path 97 %Seq 100.00
Highlighted IDENTICAL residue ALA 98 index1 455 path 98 %Seq 100.00
Highlighted IDENTICAL residue LYS 99 index1 456 path 99 %Seq 100.00
Highlighted IDENTICAL residue GLY 100 index1 457 path 100 %Seq 100.00
Highlighted IDENTICAL residue GLY 101 index1 458 path 101 %Seq 100.00
Highlighted IDENTICAL residue PHE 102 index1 459 path 102 %Seq 100.00
Highlighted IDENTICAL residue ILE 103 index1 460 path 103 %Seq 100.00
Highlighted IDENTICAL residue PHE 104 index1 461 path 104 %Seq 100.00
Highlighted IDENTICAL residue CYS 105 index1 462 path 105 %Seq 100.00
Highlighted IDENTICAL residue GLN 106 index1 463 path 106 %Seq 100.00
Highlighted IDENTICAL residue LEU 107 index1 464 path 107 %Seq 100.00
Highlighted IDENTICAL residue TRP 108 index1 465 path 108 %Seq 100.00
Highlighted IDENTICAL residue HIS 109 index1 466 path 109 %Seq 100.00
Highlighted IDENTICAL residue VAL 110 index1 467 path 110 %Seq 100.00
Highlighted IDENTICAL residue GLY 111 index1 468 path 111 %Seq 100.00
Highlighted IDENTICAL residue ARG 112 index1 469 path 112 %Seq 100.00
Highlighted IDENTICAL residue ALA 113 index1 470 path 113 %Seq 100.00
Highlighted IDENTICAL residue SER 114 index1 471 path 114 %Seq 100.00
Highlighted IDENTICAL residue HIS 115 index1 472 path 115 %Seq 100.00
Highlighted IDENTICAL residue ALA 116 index1 473 path 116 %Seq 100.00
Highlighted IDENTICAL residue VAL 117 index1 474 path 117 %Seq 100.00
Highlighted IDENTICAL residue TYR 118 index1 475 path 118 %Seq 100.00
Highlighted IDENTICAL residue GLN 119 index1 476 path 119 %Seq 100.00
Highlighted IDENTICAL residue PRO 120 index1 477 path 120 %Seq 100.00
Highlighted IDENTICAL residue ASN 121 index1 478 path 121 %Seq 100.00
Highlighted IDENTICAL residue GLY 122 index1 479 path 122 %Seq 100.00
Highlighted IDENTICAL residue GLY 123 index1 480 path 123 %Seq 100.00
Highlighted IDENTICAL residue SER 124 index1 481 path 124 %Seq 100.00
Highlighted IDENTICAL residue PRO 125 index1 482 path 125 %Seq 100.00
Highlighted IDENTICAL residue ILE 126 index1 483 path 126 %Seq 100.00
Highlighted IDENTICAL residue SER 127 index1 484 path 127 %Seq 100.00
Highlighted IDENTICAL residue SER 128 index1 485 path 128 %Seq 100.00
Highlighted IDENTICAL residue THR 129 index1 486 path 129 %Seq 100.00
Highlighted IDENTICAL residue ASN 130 index1 487 path 130 %Seq 100.00
Highlighted IDENTICAL residue LYS 131 index1 488 path 131 %Seq 100.00
Highlighted IDENTICAL residue PRO 132 index1 489 path 132 %Seq 100.00
Highlighted IDENTICAL residue ILE 133 index1 490 path 133 %Seq 100.00
Highlighted IDENTICAL residue SER 134 index1 491 path 134 %Seq 100.00
Highlighted IDENTICAL residue GLU 135 index1 492 path 135 %Seq 100.00
Highlighted IDENTICAL residue ASN 136 index1 493 path 136 %Seq 100.00
Highlighted IDENTICAL residue ARG 137 index1 494 path 137 %Seq 100.00
Highlighted IDENTICAL residue TRP 138 index1 495 path 138 %Seq 100.00
Highlighted IDENTICAL residue ARG 139 index1 496 path 139 %Seq 100.00
Highlighted IDENTICAL residue VAL 140 index1 497 path 140 %Seq 100.00
Highlighted IDENTICAL residue LEU 141 index1 498 path 141 %Seq 100.00
Highlighted IDENTICAL residue LEU 142 index1 499 path 142 %Seq 100.00
Highlighted IDENTICAL residue PRO 143 index1 500 path 143 %Seq 100.00
Highlighted IDENTICAL residue ASP 144 index1 501 path 144 %Seq 100.00
Highlighted IDENTICAL residue GLY 145 index1 502 path 145 %Seq 100.00
Highlighted IDENTICAL residue SER 146 index1 503 path 146 %Seq 100.00
Highlighted IDENTICAL residue HIS 147 index1 504 path 147 %Seq 100.00
Highlighted IDENTICAL residue VAL 148 index1 505 path 148 %Seq 100.00
Highlighted IDENTICAL residue LYS 149 index1 506 path 149 %Seq 100.00
Highlighted IDENTICAL residue TYR 150 index1 507 path 150 %Seq 100.00
Highlighted IDENTICAL residue PRO 151 index1 508 path 151 %Seq 100.00
Highlighted IDENTICAL residue LYS 152 index1 509 path 152 %Seq 100.00
Highlighted IDENTICAL residue PRO 153 index1 510 path 153 %Seq 100.00
Highlighted IDENTICAL residue ARG 154 index1 511 path 154 %Seq 100.00
Highlighted IDENTICAL residue ALA 155 index1 512 path 155 %Seq 100.00
Highlighted IDENTICAL residue LEU 156 index1 513 path 156 %Seq 100.00
Highlighted IDENTICAL residue GLU 157 index1 514 path 157 %Seq 100.00
Highlighted IDENTICAL residue ALA 158 index1 515 path 158 %Seq 100.00
Highlighted IDENTICAL residue SER 159 index1 516 path 159 %Seq 100.00
Highlighted IDENTICAL residue GLU 160 index1 517 path 160 %Seq 100.00
Highlighted IDENTICAL residue ILE 161 index1 518 path 161 %Seq 100.00
Highlighted IDENTICAL residue PRO 162 index1 519 path 162 %Seq 100.00
Highlighted IDENTICAL residue ARG 163 index1 520 path 163 %Seq 100.00
Highlighted IDENTICAL residue VAL 164 index1 521 path 164 %Seq 100.00
Highlighted IDENTICAL residue VAL 165 index1 522 path 165 %Seq 100.00
Highlighted IDENTICAL residue GLU 166 index1 523 path 166 %Seq 100.00
Highlighted IDENTICAL residue ASP 167 index1 524 path 167 %Seq 100.00
Highlighted IDENTICAL residue TYR 168 index1 525 path 168 %Seq 100.00
Highlighted IDENTICAL residue CYS 169 index1 526 path 169 %Seq 100.00
Highlighted IDENTICAL residue LEU 170 index1 527 path 170 %Seq 100.00
Highlighted IDENTICAL residue SER 171 index1 528 path 171 %Seq 100.00
Highlighted IDENTICAL residue ALA 172 index1 529 path 172 %Seq 100.00
Highlighted IDENTICAL residue LEU 173 index1 530 path 173 %Seq 100.00
Highlighted IDENTICAL residue ASN 174 index1 531 path 174 %Seq 100.00
Highlighted IDENTICAL residue ALA 175 index1 532 path 175 %Seq 100.00
Highlighted IDENTICAL residue ILE 176 index1 533 path 176 %Seq 100.00
Highlighted IDENTICAL residue ARG 177 index1 534 path 177 %Seq 100.00
Highlighted IDENTICAL residue ALA 178 index1 535 path 178 %Seq 100.00
Highlighted IDENTICAL residue GLY 179 index1 536 path 179 %Seq 100.00
Highlighted IDENTICAL residue PHE 180 index1 537 path 180 %Seq 100.00
Highlighted IDENTICAL residue ASP 181 index1 538 path 181 %Seq 100.00
Highlighted IDENTICAL residue GLY 182 index1 539 path 182 %Seq 100.00
Highlighted IDENTICAL residue ILE 183 index1 540 path 183 %Seq 100.00
Highlighted IDENTICAL residue GLU 184 index1 541 path 184 %Seq 100.00
Highlighted IDENTICAL residue ILE 185 index1 542 path 185 %Seq 100.00
Highlighted IDENTICAL residue HIS 186 index1 543 path 186 %Seq 100.00
Highlighted IDENTICAL residue GLY 187 index1 544 path 187 %Seq 100.00
Highlighted IDENTICAL residue ALA 188 index1 545 path 188 %Seq 100.00
Highlighted IDENTICAL residue HIS 189 index1 546 path 189 %Seq 100.00
Highlighted IDENTICAL residue GLY 190 index1 547 path 190 %Seq 100.00
Highlighted IDENTICAL residue TYR 191 index1 548 path 191 %Seq 100.00
Highlighted IDENTICAL residue LEU 192 index1 549 path 192 %Seq 100.00
Highlighted IDENTICAL residue ILE 193 index1 550 path 193 %Seq 100.00
Highlighted IDENTICAL residue ASP 194 index1 551 path 194 %Seq 100.00
Highlighted IDENTICAL residue GLN 195 index1 552 path 195 %Seq 100.00
Highlighted IDENTICAL residue PHE 196 index1 553 path 196 %Seq 100.00
Highlighted IDENTICAL residue LEU 197 index1 554 path 197 %Seq 100.00
Highlighted IDENTICAL residue LYS 198 index1 555 path 198 %Seq 100.00
Highlighted IDENTICAL residue ASP 199 index1 556 path 199 %Seq 100.00
Highlighted IDENTICAL residue GLY 200 index1 557 path 200 %Seq 100.00
Highlighted IDENTICAL residue ILE 201 index1 558 path 201 %Seq 100.00
Highlighted IDENTICAL residue ASN 202 index1 559 path 202 %Seq 100.00
Highlighted IDENTICAL residue ASP 203 index1 560 path 203 %Seq 100.00
Highlighted IDENTICAL residue ARG 204 index1 561 path 204 %Seq 100.00
Highlighted IDENTICAL residue THR 205 index1 562 path 205 %Seq 100.00
Highlighted IDENTICAL residue ASP 206 index1 563 path 206 %Seq 100.00
Highlighted IDENTICAL residue GLN 207 index1 564 path 207 %Seq 100.00
Highlighted IDENTICAL residue TYR 208 index1 565 path 208 %Seq 100.00
Highlighted IDENTICAL residue GLY 209 index1 566 path 209 %Seq 100.00
Highlighted IDENTICAL residue GLY 210 index1 567 path 210 %Seq 100.00
Highlighted IDENTICAL residue SER 211 index1 568 path 211 %Seq 100.00
Highlighted IDENTICAL residue ILE 212 index1 569 path 212 %Seq 100.00
Highlighted IDENTICAL residue ALA 213 index1 570 path 213 %Seq 100.00
Highlighted IDENTICAL residue ASN 214 index1 571 path 214 %Seq 100.00
Highlighted IDENTICAL residue ARG 215 index1 572 path 215 %Seq 100.00
Highlighted IDENTICAL residue CYS 216 index1 573 path 216 %Seq 100.00
Highlighted IDENTICAL residue ARG 217 index1 574 path 217 %Seq 100.00
Highlighted IDENTICAL residue PHE 218 index1 575 path 218 %Seq 100.00
Highlighted IDENTICAL residue LEU 219 index1 576 path 219 %Seq 100.00
Highlighted IDENTICAL residue LYS 220 index1 577 path 220 %Seq 100.00
Highlighted IDENTICAL residue GLN 221 index1 578 path 221 %Seq 100.00
Highlighted IDENTICAL residue VAL 222 index1 579 path 222 %Seq 100.00
Highlighted IDENTICAL residue VAL 223 index1 580 path 223 %Seq 100.00
Highlighted IDENTICAL residue GLU 224 index1 581 path 224 %Seq 100.00
Highlighted IDENTICAL residue GLY 225 index1 582 path 225 %Seq 100.00
Highlighted IDENTICAL residue VAL 226 index1 583 path 226 %Seq 100.00
Highlighted IDENTICAL residue VAL 227 index1 584 path 227 %Seq 100.00
Highlighted IDENTICAL residue SER 228 index1 585 path 228 %Seq 100.00
Highlighted IDENTICAL residue ALA 229 index1 586 path 229 %Seq 100.00
Highlighted IDENTICAL residue ILE 230 index1 587 path 230 %Seq 100.00
Highlighted IDENTICAL residue GLY 231 index1 588 path 231 %Seq 100.00
Highlighted IDENTICAL residue ALA 232 index1 589 path 232 %Seq 100.00
Highlighted IDENTICAL residue SER 233 index1 590 path 233 %Seq 100.00
Highlighted IDENTICAL residue LYS 234 index1 591 path 234 %Seq 100.00
Highlighted IDENTICAL residue VAL 235 index1 592 path 235 %Seq 100.00
Highlighted IDENTICAL residue GLY 236 index1 593 path 236 %Seq 100.00
Highlighted IDENTICAL residue VAL 237 index1 594 path 237 %Seq 100.00
Highlighted IDENTICAL residue ARG 238 index1 595 path 238 %Seq 100.00
Highlighted IDENTICAL residue VAL 239 index1 596 path 239 %Seq 100.00
Highlighted IDENTICAL residue SER 240 index1 597 path 240 %Seq 100.00
Highlighted IDENTICAL residue PRO 241 index1 598 path 241 %Seq 100.00
Highlighted IDENTICAL residue ALA 242 index1 599 path 242 %Seq 100.00
Highlighted IDENTICAL residue ILE 243 index1 600 path 243 %Seq 100.00
Highlighted IDENTICAL residue ASP 244 index1 601 path 244 %Seq 100.00
Highlighted IDENTICAL residue HIS 245 index1 602 path 245 %Seq 100.00
Highlighted IDENTICAL residue LEU 246 index1 603 path 246 %Seq 100.00
Highlighted IDENTICAL residue ASP 247 index1 604 path 247 %Seq 100.00
Highlighted IDENTICAL residue ALA 248 index1 605 path 248 %Seq 100.00
Highlighted IDENTICAL residue THR 249 index1 606 path 249 %Seq 100.00
Highlighted IDENTICAL residue ASP 250 index1 607 path 250 %Seq 100.00
Highlighted IDENTICAL residue SER 251 index1 608 path 251 %Seq 100.00
Highlighted IDENTICAL residue ASP 252 index1 609 path 252 %Seq 100.00
Highlighted IDENTICAL residue PRO 253 index1 610 path 253 %Seq 100.00
Highlighted IDENTICAL residue LEU 254 index1 611 path 254 %Seq 100.00
Highlighted IDENTICAL residue SER 255 index1 612 path 255 %Seq 100.00
Highlighted IDENTICAL residue LEU 256 index1 613 path 256 %Seq 100.00
Highlighted IDENTICAL residue GLY 257 index1 614 path 257 %Seq 100.00
Highlighted IDENTICAL residue LEU 258 index1 615 path 258 %Seq 100.00
Highlighted IDENTICAL residue ALA 259 index1 616 path 259 %Seq 100.00
Highlighted IDENTICAL residue VAL 260 index1 617 path 260 %Seq 100.00
Highlighted IDENTICAL residue VAL 261 index1 618 path 261 %Seq 100.00
Highlighted IDENTICAL residue GLY 262 index1 619 path 262 %Seq 100.00
Highlighted IDENTICAL residue MET 263 index1 620 path 263 %Seq 100.00
Highlighted IDENTICAL residue LEU 264 index1 621 path 264 %Seq 100.00
Highlighted IDENTICAL residue ASN 265 index1 622 path 265 %Seq 100.00
Highlighted IDENTICAL residue LYS 266 index1 623 path 266 %Seq 100.00
Highlighted IDENTICAL residue LEU 267 index1 624 path 267 %Seq 100.00
Highlighted IDENTICAL residue GLN 268 index1 625 path 268 %Seq 100.00
Highlighted IDENTICAL residue GLY 269 index1 626 path 269 %Seq 100.00
Highlighted IDENTICAL residue VAL 270 index1 627 path 270 %Seq 100.00
Highlighted IDENTICAL residue ASN 271 index1 628 path 271 %Seq 100.00
Highlighted IDENTICAL residue GLY 272 index1 629 path 272 %Seq 100.00
Highlighted IDENTICAL residue SER 273 index1 630 path 273 %Seq 100.00
Highlighted IDENTICAL residue LYS 274 index1 631 path 274 %Seq 100.00
Highlighted IDENTICAL residue LEU 275 index1 632 path 275 %Seq 100.00
Highlighted IDENTICAL residue ALA 276 index1 633 path 276 %Seq 100.00
Highlighted IDENTICAL residue TYR 277 index1 634 path 277 %Seq 100.00
Highlighted IDENTICAL residue LEU 278 index1 635 path 278 %Seq 100.00
Highlighted IDENTICAL residue HIS 279 index1 636 path 279 %Seq 100.00
Highlighted IDENTICAL residue VAL 280 index1 637 path 280 %Seq 100.00
Highlighted IDENTICAL residue THR 281 index1 638 path 281 %Seq 100.00
Highlighted IDENTICAL residue GLN 282 index1 639 path 282 %Seq 100.00
Highlighted IDENTICAL residue PRO 283 index1 640 path 283 %Seq 100.00
Highlighted IDENTICAL residue ARG 284 index1 641 path 284 %Seq 100.00
Highlighted IDENTICAL residue TYR 285 index1 642 path 285 %Seq 100.00
Highlighted IDENTICAL residue HIS 286 index1 643 path 286 %Seq 100.00
Highlighted IDENTICAL residue ALA 287 index1 644 path 287 %Seq 100.00
Highlighted IDENTICAL residue TYR 288 index1 645 path 288 %Seq 100.00
Highlighted IDENTICAL residue ASP 299 index1 646 path 299 %Seq 100.00
Highlighted IDENTICAL residue GLU 300 index1 647 path 300 %Seq 100.00
Highlighted IDENTICAL residue GLU 301 index1 648 path 301 %Seq 100.00
Highlighted IDENTICAL residue GLU 302 index1 649 path 302 %Seq 100.00
Highlighted IDENTICAL residue ALA 303 index1 650 path 303 %Seq 100.00
Highlighted IDENTICAL residue LYS 304 index1 651 path 304 %Seq 100.00
Highlighted IDENTICAL residue LEU 305 index1 652 path 305 %Seq 100.00
Highlighted IDENTICAL residue MET 306 index1 653 path 306 %Seq 100.00
Highlighted IDENTICAL residue LYS 307 index1 654 path 307 %Seq 100.00
Highlighted IDENTICAL residue SER 308 index1 655 path 308 %Seq 100.00
Highlighted IDENTICAL residue LEU 309 index1 656 path 309 %Seq 100.00
Highlighted IDENTICAL residue ARG 310 index1 657 path 310 %Seq 100.00
Highlighted IDENTICAL residue MET 311 index1 658 path 311 %Seq 100.00
Highlighted IDENTICAL residue ALA 312 index1 659 path 312 %Seq 100.00
Highlighted IDENTICAL residue TYR 313 index1 660 path 313 %Seq 100.00
Highlighted IDENTICAL residue ASN 314 index1 661 path 314 %Seq 100.00
Highlighted IDENTICAL residue GLY 315 index1 662 path 315 %Seq 100.00
Highlighted IDENTICAL residue THR 316 index1 663 path 316 %Seq 100.00
Highlighted IDENTICAL residue PHE 317 index1 664 path 317 %Seq 100.00
Highlighted IDENTICAL residue MET 318 index1 665 path 318 %Seq 100.00
Highlighted IDENTICAL residue SER 319 index1 666 path 319 %Seq 100.00
Highlighted IDENTICAL residue SER 320 index1 667 path 320 %Seq 100.00
Highlighted IDENTICAL residue GLY 321 index1 668 path 321 %Seq 100.00
Highlighted IDENTICAL residue GLY 322 index1 669 path 322 %Seq 100.00
Highlighted IDENTICAL residue PHE 323 index1 670 path 323 %Seq 100.00
Highlighted IDENTICAL residue ASN 324 index1 671 path 324 %Seq 100.00
Highlighted IDENTICAL residue LYS 325 index1 672 path 325 %Seq 100.00
Highlighted IDENTICAL residue GLU 326 index1 673 path 326 %Seq 100.00
Highlighted IDENTICAL residue LEU 327 index1 674 path 327 %Seq 100.00
Highlighted IDENTICAL residue GLY 328 index1 675 path 328 %Seq 100.00
Highlighted IDENTICAL residue MET 329 index1 676 path 329 %Seq 100.00
Highlighted IDENTICAL residue GLN 330 index1 677 path 330 %Seq 100.00
Highlighted IDENTICAL residue ALA 331 index1 678 path 331 %Seq 100.00
Highlighted IDENTICAL residue VAL 332 index1 679 path 332 %Seq 100.00
Highlighted IDENTICAL residue GLN 333 index1 680 path 333 %Seq 100.00
Highlighted IDENTICAL residue GLN 334 index1 681 path 334 %Seq 100.00
Highlighted IDENTICAL residue GLY 335 index1 682 path 335 %Seq 100.00
Highlighted IDENTICAL residue ASP 336 index1 683 path 336 %Seq 100.00
Highlighted IDENTICAL residue ALA 337 index1 684 path 337 %Seq 100.00
Highlighted IDENTICAL residue ASP 338 index1 685 path 338 %Seq 100.00
Highlighted IDENTICAL residue LEU 339 index1 686 path 339 %Seq 100.00
Highlighted IDENTICAL residue VAL 340 index1 687 path 340 %Seq 100.00
Highlighted IDENTICAL residue SER 341 index1 688 path 341 %Seq 100.00
Highlighted IDENTICAL residue TYR 342 index1 689 path 342 %Seq 100.00
Highlighted IDENTICAL residue GLY 343 index1 690 path 343 %Seq 100.00
Highlighted IDENTICAL residue ARG 344 index1 691 path 344 %Seq 100.00
Highlighted IDENTICAL residue LEU 345 index1 692 path 345 %Seq 100.00
Highlighted IDENTICAL residue PHE 346 index1 693 path 346 %Seq 100.00
Highlighted IDENTICAL residue ILE 347 index1 694 path 347 %Seq 100.00
Highlighted IDENTICAL residue ALA 348 index1 695 path 348 %Seq 100.00
Highlighted IDENTICAL residue ASN 349 index1 696 path 349 %Seq 100.00
Highlighted IDENTICAL residue PRO 350 index1 697 path 350 %Seq 100.00
Highlighted IDENTICAL residue ASP 351 index1 698 path 351 %Seq 100.00
Highlighted IDENTICAL residue LEU 352 index1 699 path 352 %Seq 100.00
Highlighted IDENTICAL residue VAL 353 index1 700 path 353 %Seq 100.00
Highlighted IDENTICAL residue SER 354 index1 701 path 354 %Seq 100.00
Highlighted IDENTICAL residue ARG 355 index1 702 path 355 %Seq 100.00
Highlighted IDENTICAL residue PHE 356 index1 703 path 356 %Seq 100.00
Highlighted IDENTICAL residue LYS 357 index1 704 path 357 %Seq 100.00
Highlighted IDENTICAL residue ILE 358 index1 705 path 358 %Seq 100.00
Highlighted IDENTICAL residue ASP 359 index1 706 path 359 %Seq 100.00
Highlighted IDENTICAL residue GLY 360 index1 707 path 360 %Seq 100.00
Highlighted IDENTICAL residue GLU 361 index1 708 path 361 %Seq 100.00
Highlighted IDENTICAL residue LEU 362 index1 709 path 362 %Seq 100.00
Highlighted IDENTICAL residue ASN 363 index1 710 path 363 %Seq 100.00
Highlighted IDENTICAL residue LYS 364 index1 711 path 364 %Seq 100.00
Highlighted IDENTICAL residue TYR 365 index1 712 path 365 %Seq 100.00
Highlighted IDENTICAL residue ASN 366 index1 713 path 366 %Seq 100.00
Highlighted IDENTICAL residue ARG 367 index1 714 path 367 %Seq 100.00
Highlighted IDENTICAL residue LYS 368 index1 715 path 368 %Seq 100.00
Highlighted IDENTICAL residue THR 369 index1 716 path 369 %Seq 100.00
Highlighted IDENTICAL residue PHE 370 index1 717 path 370 %Seq 100.00
Highlighted IDENTICAL residue TYR 371 index1 718 path 371 %Seq 100.00
Highlighted IDENTICAL residue THR 372 index1 719 path 372 %Seq 100.00
Highlighted IDENTICAL residue GLN 373 index1 720 path 373 %Seq 100.00
Highlighted IDENTICAL residue ASP 374 index1 721 path 374 %Seq 100.00
Highlighted IDENTICAL residue PRO 375 index1 722 path 375 %Seq 100.00
Highlighted IDENTICAL residue VAL 376 index1 723 path 376 %Seq 100.00
Highlighted IDENTICAL residue VAL 377 index1 724 path 377 %Seq 100.00
Highlighted IDENTICAL residue GLY 378 index1 725 path 378 %Seq 100.00
Highlighted IDENTICAL residue TYR 379 index1 726 path 379 %Seq 100.00
Highlighted IDENTICAL residue THR 380 index1 727 path 380 %Seq 100.00
Highlighted IDENTICAL residue ASP 381 index1 728 path 381 %Seq 100.00
Highlighted IDENTICAL residue TYR 382 index1 729 path 382 %Seq 100.00
Highlighted IDENTICAL residue PRO 383 index1 730 path 383 %Seq 100.00
Highlighted IDENTICAL residue PHE 384 index1 731 path 384 %Seq 100.00
Highlighted IDENTICAL residue LEU 385 index1 732 path 385 %Seq 100.00
Highlighted 367 residues for visualization
Wrote PyMOL macro into file /usr/local/www/html/proteins/htdocs/results/At2g06050-1q45A.pir.txt.1Q45.pdb.conservation.pml
===============================================================================
The program
/usr/local/www/html/proteins/Compiled_Programs/WYRM/PyMOL_highlight_conserved_residues At2g06050-1q45A.pir.txt PIR amino_acid 1Q45.pdb _ 100.0 BLOSUM62.dat 
completed successfully.
@@@@@@@@@@@@@@@@@@@@ END /usr/local/www/html/proteins/Compiled_Programs/WYRM/PyMOL_highlight_conserved_residues @@@@@@@@@@@@@@@@@@@@