Protein sequence:
MNTTDCFIAVVNAIREIRALFLPRTTGKMEFTLHDGEKKVFYSRPNNHDNCWLNTILQLFRYVDEPFFDWVYNSPENLTLEAIKQLEELTGLELREGGPPALVIWNIKHLLHTGIGTASRPSEVCMVDGTDMCLADFHAGIFMKGQEHAVFACVTSNGWYAIDDEDFYPWTPDPSDVLVFVPYDQEPLNEGWKANVQRKLKGAGQSSPATGSQNQSGNTGSIINNYYMQQYQNSMDTQLGDNAISGGSNEGSTDTTSTHTTNTQNNDWFSKLASSAFSGLFGALLADKKTEETTLLEDRILTTRNGHTTSTTQSSVGVTFGYATAEDSTSGPNTSGLETRVHQAERFFKMALFDWVPSQNFGHMHKVVLPHEPKGVYGGLVKSYAYMRNGWDVEVTAVGNQFNGGCLLVALVPEMGDISDREKYQLTLYPHQFINPRTNMTAHITVPYVGVNRYDQYKQHRPWTLVVMVVAPLTTNTAGAQQIKVYANIAPTNVHVAGELPSKEGIFPVACSDGYGNMVTTDPKTADPAYGKVYNPPRTALPGRFTNYLDVAEACPTFLMFENVPYVSTRTDGQRLLAKFDVSLAAKHMSNTYLAGLAQYYTQYTGTINLHFMFTGPTDAKARYMVAYVPPGMDAPDNPEEAAHCIHAEWDTGLNSKFTFSIPYISAADYAYTASHEAETTCVQGWVCVYQITHGKADADALVVSASAGKDFELRLPVDARQQTTATGESADPVTTTVENYGGETQVQRRHHTDVAFVLDRFVKVTVSGNQHTLDVMQAHKDNIVGALLRAATYYFSDLEIAVTHTGKLTWVPNGAPVSALDNTTNPTAYHKGPLTRLALPYTAPHRVLATAYTGTTTYTASTRGDSAHLTATRARHLPTSFNFGAVKAETITELLVRMKRAELYCPRPILPIQPTGDRHKQPLVAPAKQLLNFDLLKLAGDVESNPGPFFFSDVRSNFSKLVETINQMQEDMSTKHGPDFNRLVSAFEELASGVKAIRTGLDEAKPWYKLIKLLSRLSCMAAVAARSKDPVLVAIMLADTGLEILDSTFVVKKISDSLSSLFHVPAPAFSFGAPILLAGLVKVASSFFRSTPEDLERAEKQLKARDINDIFAILKNGEWLVKLILAIRDWIKAWIASEEKFVTMTDLVPGILEKQRDLNDPSKYKDAKEWLDNTRQACLKSGNVHIANLCKVVAPAPSKSRPEPVVVCLRGKSGQGKSFLANVLAQAISTHLTGRTDSVWYCPPDPDHFDGYNQQTVVVMDDLGQNPDGKDFKYFAQMVSTTGFIPPMASLEDKGKPFSSKVIIATTNLYSGFTPKTMVCPDALNRRFHFDIDVSAKDGYKINNKLDIIKALEDTHTNPVAMFQYDCALLNGMAVEMKRLQQDMFKPQPPLQNVYQLVQEVIERVELHEKVSSHPIFKQISIPSQKSVLYFLIEKGQHEAAIEFFEGMVHDSIKEELRPLIQQTSFVKRAFKRLKENFEIVALCLTLLANIVIMIRETHKRQKMVDDAVNEYIEKANITTDDKTLDEAEKNPLETSGASTVGFRERTLPGQKARDDVNSEPAQPTEEQPQAEGPYAGPLERQRPLKVRAKLPQQEGPYAGPMERQKPLKVKARAPVVKEGPYEGPVKKPVALKVKAKNLIVTESGAPPTDLQKMVMGNTKPVELILDGKTVAICCATGVFGTAYLVPRHLFAEKYDKIMLDGRALTDSDYRVFEFEIKVKGQDMLSDAALMVLHRGNRVRDITKHFRDVARMKKGTPVVGVINNADVGRLIFSGEALTYKDIVVCMDGDTMPGLFAYKAATKAGYCGGAVLAKDGADTFIVGTHSAGGNGVGYCSCVSRSMLLKMKAHIDPEPHHEGLIVDTRDVEERVHVMRKTKLAPTVAHGVFNPEFGPAALSNKDPRLNEGVVLDEVIFSKHKGDTKMSEEDKALFRRCAADYASRLHSVLGTANAPLSIYEAIKGVDGLDAMEPDTAPGLPWALQGKRRGALIDFENGTVGPEVEAALKLMEKREYKFACQTFLKDEIRPMEKVRAGKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVGCNPDVDWQRFGTHFAQYRNVWDVDYSAFDANHCSDAMNIMFEEVFRTEFGFHPNAEWILKTLVNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALRRHYEGVELDTYTMISYGDDIVVASDYDLDFEALKPHFKSLGQTITPADKSDKGFVLGHSITDVTFLKRHFHMDYGTGFYKPVMASKTLEAILSFARRGTIQEKLISVAGLAVHSGPDEYRRLFEPFQGLFEIPSYRSLYLRWVNAVCGDA

Annotated regions:
phrase: APPTDLQKMVMGNTKPVELILDGKTVAICCATGVFGTAYLVPRHLFAEKYDKIMLDGRALTDSDYRVFEFEIKVKGQDMLSDAALMVLHRGNRVRDITKHFRDVARMKKGTPVVGVINNADVGRLIFSGEALTYKDIVVCMDGDTMPGLFAYKAATKAGYCGGAVLAKDGADTFIVGTHSAGGNGVGYCSCVSRSM
type: DOMAIN
name: PCV_3C_PRO
description: Picornavirales 3C/3C-like protease domain

phrase: MNTTDCFIAVVNAIREIRALFLPRTTGKMEFTLHDGEKKVFYSRPNNHDNCWLNTILQLFRYVDEPFFDWVYNSPENLTLEAIKQLEELTGLELREGGPPALVIWNIKHLLHTGIGTASRPSEVCMVDGTDMCLADFHAGIFMKGQEHAVFACVTSNGWYAIDDEDFYPWTPDPSDVLVFVPYDQEPLNEGWKANVQRKL
type: DOMAIN
name: Peptidase_C28
description: Peptidase C28, foot-and-mouth virus L-proteinase

phrase: MEFTLHDGEKKVFYSRPNNHDNCWLNTILQLFRYVDEPFFDWVYNSPENLTLEAIKQLEELTGLELREGGPPALVIWNIKHLLHTGIGTASRPSEVCMVDGTDMCLADFHAGIFMKGQEHAVFACVTSNGWYAIDDEDFYPWTPDPSDVLVFV
type: DOMAIN
name: Peptidase_C28
description: Peptidase C28, foot-and-mouth virus L-proteinase

phrase: APPTDLQKMVMGNTKPVELILDGKTVAICCATGVFGTAYLVPRHLFAEKYDKIMLDGRALTDSDYRVFEFEIKVKGQDMLSDAALMVLHRGNRVRDITKHFRDVARMKKGTPVVGVINNADVGRLIFSGEALTYKDIVVCMDGDTMPGLFAYKAATKAGYCGGAVLAKDGADTFIVGTHSAGGN
type: DOMAIN
name: Peptidase_C3A/C3B_picornavir
description: Peptidase C3A/C3B, picornaviral

phrase: TTTVENYGGETQVQRRHHT
type: DOMAIN
name: FMDV_VP1_coat
description: Foot-and-mouth disease virus VP1 coat

phrase: FVLDRFVKVTVSGNQHTLDVM
type: DOMAIN
name: FMDV_VP1_coat
description: Foot-and-mouth disease virus VP1 coat

phrase: TYYFSDLEIAVTHTGKLTWVPNGA
type: DOMAIN
name: FMDV_VP1_coat
description: Foot-and-mouth disease virus VP1 coat

phrase: ALDNTTNPTAYHKGPLTRLA
type: DOMAIN
name: FMDV_VP1_coat
description: Foot-and-mouth disease virus VP1 coat

phrase: PYTAPHRVLATAYTGTTT
type: DOMAIN
name: FMDV_VP1_coat
description: Foot-and-mouth disease virus VP1 coat

phrase: RGDSAHLTATRARHLPTSFNF
type: DOMAIN
name: FMDV_VP1_coat
description: Foot-and-mouth disease virus VP1 coat

phrase: AVKAETITELLVR
type: DOMAIN
name: FMDV_VP1_coat
description: Foot-and-mouth disease virus VP1 coat

phrase: MKRAELYCPRPILPIQP
type: DOMAIN
name: FMDV_VP1_coat
description: Foot-and-mouth disease virus VP1 coat

phrase: DRHKQPLVAPAKQL
type: DOMAIN
name: FMDV_VP1_coat
description: Foot-and-mouth disease virus VP1 coat

phrase: PTVAHGVFNPEFGPAALSNKDPRLNEGVVLDEVIFSKHKGDTKMSEEDKALFRRCAADYASRLHSVLGTANAPLSIYEAIKGVDGLDAMEPDTAPGLPWALQGKRRGALIDFENGTVGPEVEAALKLMEKREYKFACQTFLKDEIRPMEKVRAGKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVGCNPDVDWQRFGTHFAQYRNVWDVDYSAFDANHCSDAMNIMFEEVFRTEFGFHPNAEWILKTLVNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALRRHYEGVELDTYTMISYGDDIVVASDYDLDFEALKPHFKSLGQTITPADKSDKGFVLGHSITDVTFLKRHFHMDYGTGFYKPVMASKTLEAILSFARRGTIQEKLISVAGLAVHSGPDEYRRLFEP
type: DOMAIN
name: RNA-dir_pol_C
description: RNA-directed RNA polymerase, C-terminal domain

phrase: RNVWDVDYSAFDANHCSDAMNIMFEEVFRTEFGFHPNAEWILKTLVNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALRRHYEGVELDTYTMISYGDDIVVASDYDLDFE
type: DOMAIN
name: RNA-dir_pol_PSvirus
description: RNA-directed RNA polymerase, catalytic domain

phrase: GAGQSSPATGSQNQSGNTGSIINNYYMQQYQNSMDTQLGDNAISGGSNEGSTDTTSTHTTNTQNNDWFSKLASSAFSGLFGAL
type: DOMAIN
name: Capsid_VP4_Picornavir
description: Capsid protein VP4, Picornavirus

phrase: VAFVLDRFVKVTVSGNQHTLDVMQAHKDNIVGALLRAATYYFSDLEIAVTHTGKLTWVPNGAPVSALDNTTNPTAYHKGPLTRLALPYTAPHRVLATAYTGTTTYTASTRGDSAHLTATRARHLPTSFNFGAVKAETITELLVRMKRAELYCPRPI
type: DOMAIN
name: Rhv-like
description: Picornavirus/Calicivirus coat protein

phrase: AERFFKMALFDWVPSQNFGHMHKVVLPHEPKGVYGGLVKSYAYMRNGWDVEVTAVGNQFNGGCLLVALVPEMGDISDREKYQLTLYPHQFINPRTNMTAHITVPYVGVNRYDQYKQHRPWTLVVMVVAPLTTNTAGAQQIKVYANIAPTNVHVAGELPS
type: DOMAIN
name: Rhv-like
description: Picornavirus/Calicivirus coat protein

phrase: VCLRGKSGQGKSFLANVLAQAISTHLTGRTDSVWYCPPDPDHFDGYNQQTVVVMDDLGQNPDGKDFKYFAQMVSTTGFIPPMASLEDKGKPFSSKVIIATTN
type: DOMAIN
name: Helicase_SF3_ssDNA/RNA_vir
description: Helicase, superfamily 3, single-stranded DNA/RNA virus

phrase: VAEACPTFLMFENVPYVSTRTDGQRLLAKFDVSLAAKHMSNTYLAGLAQYYTQYTGTINLHFMFTGPTDAKARYMVAYVPPGMDAPDNPEEAAHCIHAEWDTGLNSKFTFSIPYISAADYAYTASHEAETTCVQGWVCVYQITHGKADADALVVSASAGKDFELRLPVDA
type: DOMAIN
name: Rhv-like
description: Picornavirus/Calicivirus coat protein

phrase: NPPRTALPGRFTNYLDVAEACPTFLMFENVPYVSTRTDGQRLLAKFDVSLAAKHMSNTYLAGLAQYYTQYTGTINLHFMFTGPTDAKARYMVAYVPPGMDAPDNPEEAAHCIHAEWDTGLNSKFTFSIPYISAADYAYTASHEAETTCVQGW
type: DOMAIN
name: Picornavirus_capsid
description: Picornavirus capsid

phrase: TTQSSVGVTFGYATAEDSTSGPNTSGLETRVHQAERFFKMALFDWVPSQNFGHMHKVVLPHEPKGVYGGLVKSYAYMRNGWDVEVTAVGNQFNGGCLLVALVPEMGDISDREKYQLTLYPHQFINPRTNMTAHITVPYVGVNRYDQYKQHRPWTLVVMVVAPL
type: DOMAIN
name: Picornavirus_capsid
description: Picornavirus capsid

phrase: NVHIANLCKVVAPAPSKSRPEPVVVCLRGKSGQGKSFLANVLAQAISTHLTGRTDSVWYCPPDPDHFDGYNQQTVVVMDDLGQNPDGKDFKYFAQMVSTTGFIPPMASLEDKGKPFSSKVIIATTNLYSGFTPKTMVCPDALNRRFHFDIDVSAKDGYKINNKL
type: DOMAIN
name: Helicase_SF3_ssRNA_vir
description: Helicase, superfamily 3, single-stranded RNA virus