nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MNLKILVGLFILGIIILSAMTFLNFTTIVAQDKGDQQPKGPIVYTYTEYNGTYFPHILTVVYYPCNATCSNLGFPSVWPVSNENQCHNAVVNTTCQALIEGVDWQLPLLNYVGGVAIPLSTPPCKLPWAQQLGVKGALVYYTQMVGEPLGVTLACGLLYATEDSMPGSITAINPVTGKIVWMANGLAGPAMNNPVVWHGIVYVSVGGVCFTFSQFVHFEDHQYCKIHRGRCGAVYAFNATNGQLLWMRFTYGEAMPAPAIYDGILAYVTGGGCFVGVNATTGQTLWVDHFPGFIANMASVNYYVLPNGTPLFIAGFTYTAPPYGYIIAVNGLNGHEAWNATMPAPYVGANTGLGDVAPAVDQQLGIVVDNDIANFSNGYVDMVTFALNATNGKPLWAVNTGRGPIPPAYKGGMPLIVGNVVYDGNPSLGTVNAICIKTGKILWSTKLPCLQTPPKFPGGPRGSPTYYHGLLWVSAGQYVYVINPKNGDILTFYWIGGRLGIMNPVIAGNTMFLSNSYGWIVAIPLSQIYPAYIYY

Annotated regions:
phrase: VTLACGLLYATEDSMPGSITAINPVTGKIVWMA
type: REPEAT
name: PQQ_b-propeller_rpt
description: Pyrrolo-quinoline quinone beta-propeller repeat

phrase: PAIYDGILAYVTGGGCFVGVNATTGQTLWVD
type: REPEAT
name: PQQ_b-propeller_rpt
description: Pyrrolo-quinoline quinone beta-propeller repeat

phrase: PLIVGNVVYDGNPSLGTVNAICIKTGKILWST
type: REPEAT
name: PQQ_b-propeller_rpt
description: Pyrrolo-quinoline quinone beta-propeller repeat

phrase: LPNGTPLFIAGFTYTAPPYGYIIAVNGLNGHEAWNA
type: REPEAT
name: PQQ_b-propeller_rpt
description: Pyrrolo-quinoline quinone beta-propeller repeat

phrase: PVVWHGIVYVSVGGVCFTFSQFVHFEDHQYCKIHRGRCGAVYAFNATNGQLLWMR
type: REPEAT
name: PQQ_b-propeller_rpt
description: Pyrrolo-quinoline quinone beta-propeller repeat

phrase: GFTYTAPPYGYIIAVNGLNGHEAWNATMPAPYVGANTGLGDVAPAVDQQLGIVVDNDIANFSNGYVDMVTFALNATNGKPLWAVNTGRGPIPPAYKGGMPLIVGNVVYDGNPSLGTVNAICIKTGKILWSTKLPCLQTPPKFPGGPRGSPTYYHGLLWVSAGQYVYVINPKNGDILTFYWIGGRLGIMNPVIAGNTMFLSNSYGWIV
type: REPEAT
name: PQQ_repeat
description: Pyrrolo-quinoline quinone repeat

phrase: GSITAINPVTGKIVWMANGLAGPAMNNPVVWHGIVYVSVGGVCFTFSQFVHFEDHQYCKIHRGRCGAVYAFNATNGQLLWMRFTYGEAMPAPAIYDGILAYVTGGGCFVGVNATTGQTLWV
type: REPEAT
name: PQQ_repeat
description: Pyrrolo-quinoline quinone repeat
Protein sequence:
MSGPTYDRKIPGISTDLSGSMSCHPTSKDSPTLPESSATDMGYYSSHHEYYQSPPYPQQMNSYHQFNLSGMGATPGAYPTKTEYPYNTYRQYGHFNRDLQTPPQSAVKEEPETEVRMVNGKPKKIRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRRSKFKKLYKNGEVPLEHSPNASDSMACNSPPSPAVWDNNAHSSQVNRGQIPQPPLSSTPPYMEDYSNHWYQQGSHLQHPVHHPGPPQSVGAVY

Annotated regions:
phrase: KKIRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRRSKFKK
type: DOMAIN
name: HD
description: Homeodomain

phrase: RKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRRSKFK
type: DOMAIN
name: HD
description: Homeodomain

phrase: AQYLALPERAE
type: DOMAIN
name: HD_metazoa
description: Homeodomain, metazoa

phrase: LGLTQTQVKI
type: DOMAIN
name: HD_metazoa
description: Homeodomain, metazoa

phrase: WFQNRRSKF
type: DOMAIN
name: HD_metazoa
description: Homeodomain, metazoa

phrase: ERAELAAQL
type: CONSERVED_SITE
name: HTH_motif
description: Helix-turn-helix motif

phrase: GLTQTQVKIWFQNRRS
type: CONSERVED_SITE
name: HTH_motif
description: Helix-turn-helix motif

phrase: IRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRRSKFKKLYKN
type: DOMAIN
name: HD
description: Homeodomain

phrase: RKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRRSKFK
type: DOMAIN
name: HD
description: Homeodomain

phrase: KDSPTLPESSATDMGYYSSHHEYYQSPPYPQQMNSYHQFNLSGMGATPGAYPTKTEYPYNTYRQYGHFNRDLQTPP
type: DOMAIN
name: Distal-less_N
description: Distal-less-like homeobox protein, N-terminal domain

phrase: LAAQLGLTQTQVKIWFQNRRSKF
type: CONSERVED_SITE
name: Homeobox_CS
description: Homeobox, conserved site
Protein sequence:
MKILFAAAEGAPFSKTGGLGDVIGALPKSLVKAGHEVGVILPYYDMTHAKFGDQVEDLFYFEVSVGWRRQYVGVKRLVLNGVSFYFIDNQHYFFRGHVYGDFDDGERFAYFQLAAVELMERIDFIPDVLHVHDYHTAMIPFLVKEKYHWIQAYQNITTVLTIHNLEFQGQFPDSMLWELFGVGYERYADGTLRWNDCLNWMKAGILYADRVTTVSPSYASEIRTPEFGCNLDQILRMESGKLVGIVNGIDTDIYNPETDPLLAHHFDKSDLSGKLENKRALQERVGLPVRDDVPVVGIVSRLTRQKGFDLVVEELHNLLQEDVQIILLGTGDPAFEQAFAWFGHAYPDKLSANILFDVTLAQEIYAASDIFLMPSRFEPCGLSQMMAMRYGTLPLVHEVGGLRDTVEPYNVYTGKGTGFSFNNFSGYWLTWTFKEALKLYADDKEAWKSLQEQAMERDFSWDTASKAYSDLYQSLL

Annotated regions:
phrase: KILFAAAEGAPFSKTGGLGDVIGALPKSLVKAGHEVGVILPYYDMTHAKFGDQVEDLFYFEVSVGWRRQYVGVKRLVLNGVSFYFIDNQHYFFRGHVYGDFDDGERFAYFQLAAVELMERIDFIPDVLHVHDYHTAMIPFLVKEKYHWIQAYQNITTVLTIHNLEFQGQFPDSMLWELFGVGYERYADGTLRWNDCLNWMKAGILYADRVTTVSPSYASEIRTPEFGCNLDQIL
type: DOMAIN
name: Starch_synth_cat_dom
description: Starch synthase, catalytic domain

phrase: LPVRDDVPVVGIVSRLTRQKGFDLVVEELHNLLQEDVQIILLGTGDPAFEQAFAWFGHAYPDKLSANILFDVTLAQEIYAASDIFLMPSRFEPCGLSQMMAMRYGTLPLVHEVGGLRDTVEPYNVYTGKGTGFS
type: DOMAIN
name: Glyco_trans_1
description: Glycosyl transferase, family 1
Protein sequence:
MPQNVVLPGPAPWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAETRLWSPQVSEDGKAHPFKINLEAEPQEFKPIGTAHNRRAQPFVAAANIDDKRQVVSASYNSPIGLYSTSNIQDALHGQLRGLIPGSLQNEPTASVPPQSDVYRMLHDNRDDPAAPRQSGSFRVLQDLVNDGPDDRPAGTRSVRAPVTKVHGGAGSAQRMPLCDKCGSGIVGAVVKARDKYRHPECFVCADCNLNLKQKGYFFVEGELYCETHARARTRPPEGYDTVTLYPKA

Annotated regions:
phrase: QVVSASYNSPIGLYSTSNIQDALHGQLRGLIPGSLQNEPTASVPPQSDVYRMLHDNRDDPAAPRQSGSFRVLQDLVNDGPDDR
type: DOMAIN
name: PDLI1-4/Zasp-like_mid
description: PDZ and LIM domain protein 1-4/Zasp-like, middle domain

phrase: QVVSASYNSPIGLYSTSNIQDALHG
type: DOMAIN
name: Zasp-like_motif
description: Zasp-like motif

phrase: APWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRA
type: DOMAIN
name: PDZ
description: PDZ domain

phrase: PLCDKCGSGIVGAVVKARDKYRHPECFVCADCNLNLKQKGYFFVEGELYCETHARARTR
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: LCDKCGSGIVGAVVKARDKYRHPECFVCADCNLNLKQKGYFFVEGELYCET
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: GPAPWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLK
type: DOMAIN
name: PDZ
description: PDZ domain

phrase: GPAPWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRA
type: DOMAIN
name: PDZ
description: PDZ domain

phrase: CDKCGSGIVGAVVKARDKYRHPECFVCADCNLNLKQKGYFFVEGELYCET
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: CDKCGSGIVGAVVKARDKYRHPECFVCADCNLN
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type
Protein sequence:
MLICNDKSNPKTLLEEIMALRPWRKGPFEISQIKIDSEWDSSIKWDLVKNATPLKDKVVADVGCNNGYYLFKMLEHGPKSLVGFDPGVLVKKQFEFLAPFFDKEKKIIYESLGVEDLHEKYPNAFDVIFCLGVLYHRKSPLEALKALYHALKIKGELVLDTLIIDSPLDIALCPKKTYAKMKNVYFIPSVSALKGWCERVGFENFEILSVLKTTPKEQRKTDFILGQSLEDFLDKTDPSKTLEGYDAPLRGYFKMLKPSKR

Annotated regions:
Protein sequence:
MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRYVVDSLRKRGAIFIEQISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPEDVWTLNVKNEDKLSFMTQTTLSVDDTSDVIDALRSRFPKIVGPRKDDICYATTNRQEAVRALAEQADVVLVVGSKNSSNSNRLAELAQRMGRRAFLIDDAADIQEAWVKEAVCVGVTAGASAPDILVQNVIARLREFGGGEAVTLEGREENIVFEVPKELRVDVREVE

Annotated regions:
Protein sequence:
MTTRQPPAEAVQHAVAALAEGRMVIVVDDADREDEGDLILAAECVTEQQMAFLVRHTTGIICVPMRADRAEGLRLPQMTADNTDAHGTAFTVTVDHVDTGTGVSAADRARTVRALASPATLADELRRPGHIFPLRAREGGVLVRAGHTEAAVDLTTMAGLSGVGVIGEIVDEDGSMRRGASLAAFAAEHDLPVLAIADLIRYRRATEQLVELVASSQMPTKFGDFRALAYRSTLDGSEHLALVLGDVAAAGRTEGGALVRVHSECLTGDILGSLRCDCGGQLEQALRAVAAEGCGAVVYLRGHEGRGIGLAHKIRAYALQEQGLDTVDANTAQGLPADSRSYGVGAQILGDLGITRLRLITNNPAKFGGLDGYGLTVASRVALPVVETPHNVRYLRTKQERMGHVLEVSSSDWLRDG

Annotated regions:
phrase: ASSQMPTKFGDFRALAYRSTLDGSEHLALVLGDVAAAGRTEGGALVRVHSECLTGDILGSLRCDCGGQLEQALRAVAAEGCGAVVYLRGHEGRGIGLAHKIRAYALQEQGLDTVDANTAQGLPADSRSYGVGAQILGDLGITRLRLITNNPAKFGGLDGYGLTVASR
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MQGGRVVLGLLCCLVAGVGSYTPWDISWAARGDPSAWSWGAEAHSRAVAGSHPVAVQCQEAQLVVTVHRDLFGTGRLINAADLTLGPAACKHSSLNAAHNTVTFAAGLHECGSVVQVTPDTLIYRTLINYDPSPASNPVIIRTNPAVIPIECHYPRRENVSSNAIRPTWSPFNSALSAEERLVFSLRLMSDDWSTERPFTGFQLGDILNIQAEVSTENHVPLRLFVDSCVAALSPDGDSSPHYAIIDFNGCLVDGRVDDTSSAFITPRPREDVLRFRIDVFRFAGDNRNLIYITCHLKVTPADQGPDPQNKACSFNKARNTWVPVEGSRDVCNCCETGNCEPPALSRRLNPMERWQSRRFRRDAGKEVAADVVIGPVLLSADPGAVGQQEEGGDGAAVMVPSVGTGLVCVAVAVALAAVGVAVGIARKGCTRTSAAV

Annotated regions:
phrase: QCQEAQLVVTVHRDLFGTGRLINAADLTLGPAACKHSSLNAAHNTVTFAAGLHECGSVVQVTPDTLIYRTLINYDPSPASNPVIIRTNPAVIPIECHYPRRENVSSNAIRPTWSPFNSALSAEERLVFSLRLMSDDWSTERPFTGFQLGDILNIQAEVSTENHVPLRLFVDSCVAALSPDGDSSPHYAIIDFNGCLVDGRVDDTSSAFITPRPREDVLRFRIDVFRFAGDNRNLIYITCHLKVTPADQGPDPQNKACSFNKAR
type: DOMAIN
name: ZP_dom
description: Zona pellucida domain

phrase: QCQEAQLVVTVHRDLFGTGRLINAADLTLGPAACKHSSLNAAHNTVTFAAGLHECGSVVQVTPDTLIYRTLINYDPSPASNPVIIRTNPAVIPIECHYPRRENVSSNAIRPTWSPFNSALSAEERLVFSLRLMSDDWSTERPFTGFQLGDILNIQAEVSTENHVPLRLFVDSCVAALSPDGDSSPHYAIIDFNGCLVDGRVDDTSSAFITPRPREDVLRFRIDVFRFAGDNRNLIYITCHLKVTPADQGPDPQNKACSF
type: DOMAIN
name: ZP_dom
description: Zona pellucida domain

phrase: CQEAQLVVTVHRDLFGTGRLINAADLTLGPAACKHSSLNAAHNTVTFAAGLHECGSVVQVTPDTLIYRTLINYDPSPASNPVIIRTNPAVIPIECHY
type: DOMAIN
name: ZP-N
description: ZP-N domain

phrase: IQAEVSTENHVPLRLFVDSCVAALSPDGDSSPHYAIIDFNG
type: CONSERVED_SITE
name: ZP_dom_CS
description: Zona pellucida domain, conserved site

phrase: ERLVFSLRLMSDDWSTERPFTGFQLGDILNIQAEVSTENHVPLRLFVDSCVAALSPDGDSSPHYAIIDFNGCLVDGRVDDTSSAFITPRPREDVLRFRIDVFRFAGDNRNLIYITCHLKVTPADQGPDPQNKAC
type: DOMAIN
name: ZP-C
description: ZP-C domain

phrase: ADLTLGPAACKHSS
type: DOMAIN
name: ZP_chr
description: Zona pellucida domain, chordate-type

phrase: AGLHECGSVVQV
type: DOMAIN
name: ZP_chr
description: Zona pellucida domain, chordate-type

phrase: PDTLIYRTLINYDPSPA
type: DOMAIN
name: ZP_chr
description: Zona pellucida domain, chordate-type

phrase: VPLRLFVDSCVAALS
type: DOMAIN
name: ZP_chr
description: Zona pellucida domain, chordate-type

phrase: SPHYAIIDFNGCLVDGR
type: DOMAIN
name: ZP_chr
description: Zona pellucida domain, chordate-type

phrase: NLIYITCHLKVTPAD
type: DOMAIN
name: ZP_chr
description: Zona pellucida domain, chordate-type
Protein sequence:
MTNFVHKTVNGLKSLLDEKGAIKLFCSEGDIMEFLVTFSQDKATLNDIQSFEAKHQLTLPQDYQKFMTLHNGAKIFEILSDGENIGGGLQLFSLEEIEEELKYEDLFEDINGIPIGYLLEECHLMIDKDKVNQGDPNYLYIFESGLEYNPLNLNFEKFLDRYILANGEPFWDWRYYTAENYYRTR

Annotated regions:
phrase: KATLNDIQSFEAKHQLTLPQDYQKFMTLHNGAKIFEILSDGENIGGGLQLFSLEEIEEELKYEDLFEDINGIPIGYLLEECHLMIDKDKVNQGDPNYLYIFESGLEYNPLNLNFEKFLD
type: DOMAIN
name: Knr4/Smi1-like_dom
description: Knr4/Smi1-like domain

phrase: ATLNDIQSFEAKHQLTLPQDYQKFMTLHNGAKIFEILSDGENIGGGLQLFSLEEIEEELKYEDLFEDINGIPIGYLLEECHLMIDKDKVNQGDPNYLYIFESGLEYNPLNLNFEKFLD
type: DOMAIN
name: Knr4/Smi1-like_dom
description: Knr4/Smi1-like domain
Protein sequence:
MGVNAVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLATEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLVSKMEPLEMPADTITSDVIGKCTTPLSDDHDEKYGVPSLEELGFDTDGLSSAVWPGGETEALTRLERHLERKAWVANFERPRMNANSLLASPTGLSPYLRFGCLSCRLFYFKLTDLYKKVKKNSSPPLSLYGQLLWREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNYPKPMVNHAEASRLNIERMKQIYQQLSRYRGLGLLASVPSNPNGNGGLMGYAPGENVPSGGSGGGNCSQGSGILHYAHGDSQQTNPLKQGRSSMGTGLSSGKRPSQEEDAQSVGPKVQRQSSN

Annotated regions:
phrase: AVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLATEAGVEVIVRISHTLYDLDKIIELNGGQPPLTYKRFQTLVSKMEP
type: DOMAIN
name: DNA_photolyase_N
description: DNA photolyase, N-terminal

phrase: VNAVHWFRKGLRLHDNPALKECIQGADTIRCVYILDPWFAGSSNVGINRWRFLLQCLEDLDANLRKLNSRLFVIRGQPADVFPRLFKEWNITKLSIEYDSEPFGKERDAAIKKLATEAGVEVIVRISHT
type: DOMAIN
name: DNA_photolyase_N
description: DNA photolyase, N-terminal

phrase: GQLLWREFFYTAATNNPRFDKMEGNPICVQIPWDKNPEALAKWAEGRTGFPWIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGMKVFEELLLDADWSINAGSWMWLSCSSFFQQFFHCYCPVGFGRRTDPNGDYIRRYLPVLRGFPAKYIYDPWNAPEGIQKVAKCLIGVNYPKPMVNHAEASRLNIERMK
type: DOMAIN
name: Cryptochr/Photolyase_FAD-bd
description: Cryptochrome/DNA photolyase, FAD-binding domain
Protein sequence:
MQSPTLLTFDLPPESRAMSVPFPQRRFSRVSRTQMVRFPDSALAWLQDLAHLTPTDFSLKDEVRNTQSHHLDSAWTSGTVKLRQKPVSFVSAGYSEPLKLLEDIEQDKVPPGEATESKADDMDITTVDVNLNVSAEAVIEKTTLVELDSAAKGKMVLSNSTSQDNPSSETPQEQAQDLFFFDVSGDKAIRDKHRAVHPPPLVPIRKPSLAESDSSEEVILFRGRAGNAKTVPQSNFVVRNGVATNTTTAITPTGDKTKPTAAEETSLRDDPEVIPVAREKRAGRQRSRSKASKIPKTDEDDEEDAILADYIANMSANPEDDFISDQLRSFNNRRDLGGDNFALNLGSGDENDMPVVEDLSGDEQQAESSGSGLSDADEDNGDENDEADEDDDMDADMDDEGLARLLAKQEELGLGSDELVLIPESFGVSKRGAKKGGQKRATPSSFAKSANASSVADAFDDLDLADWTVPVPRKRRSKQPPNFNISDSEIEAKLKLDWSRDRERKKERKLARESLRGQGLLDKNASPDDLRVKYPVGLRLEDFKTELVAFLISSDERLEFPPLDKHGRMVLHQLALKFNVKSQSTGKGTTRRPVLYRSKRTITFKPHQITEATRQVDGAARRVGRKYFPRADVAGPRGDTPRDGFRGSAHVSVKALVLREGEVVGASAPELGQENKGRAMLEKMGWSKGMALGALENKGILEPVAQVVKKSKAGLGRT

Annotated regions:
phrase: LEDFKTELVAFLISSDERLEFPPLDKHGRMVLHQLALKFNVKSQSTGKGTTRRPVLY
type: DOMAIN
name: R3H_dom
description: R3H domain

phrase: QENKGRAMLEKMGWSKGMALGALENKGILEPVAQVVKKSKAGLGR
type: DOMAIN
name: G_patch_dom
description: G-patch domain

phrase: GLRLEDFKTELVAFLISSDERLEFPPLDKHGRMVLHQLALKFNVKSQSTGKGTTRRPVLYRS
type: DOMAIN
name: R3H_dom
description: R3H domain

phrase: LLDKNASPDDLRVKYPVGLRLEDFKTELVAFLISSDERLEFPPLDKHGRMVLHQLALKFNVKSQSTGKGTTRRPVLYR
type: DOMAIN
name: R3H_dom
description: R3H domain

phrase: LGQENKGRAMLEKMGWSKGMALGALENKGILEPVAQVVKKSKAGLGR
type: DOMAIN
name: G_patch_dom
description: G-patch domain

phrase: ENKGRAMLEKMGWSKGMALGALENKGILEPVAQVVKKSKAGL
type: DOMAIN
name: G_patch_dom
description: G-patch domain

phrase: LEDFKTELVAFLISSDERLEFPPLDKHGRMVLHQLALKFNVKSQSTGKGTTRRPVLY
type: DOMAIN
name: R3H_G-patch
description: Protein SQS1, R3H domain
Protein sequence:
MLTKRIIPCLDVKDGKTVKGVNFLNLRDAGDPVELGALYSQQGADELVFLDITATLEKRGTLVELVKRVAQHINIPFTIGGGIGSIEDVSACLNAGADKVSVNSSAIKNPALIDQLSKEFGNQCIVVAIDTRNVGGMNLVHSHGGTKPTDLDTIAWAKEMQERGAGELLLTSMDKDGTKAGFANELTAYISTHVSIPIIASGGAGTMEHFTDVFTLGKADAALAASIFHFKEIAIPELKSYLSGKGIHMRK

Annotated regions:
Protein sequence:
MIKKKSHSGLKKRIKISKNKKILRGHAYKNHLAASKTTKQNRQLRGLTMVHKSDVKRIKIMLNNL

Annotated regions:
phrase: KSHSGLKKRIKISKNKKILRGHAYKN
type: CONSERVED_SITE
name: Ribosomal_bL35_CS
description: Large ribosomal subunit protein bL35, conserved site
Protein sequence:
MAIGLIGRKVGMTRIFTEDGASIPVTVIEIAANRVTQVRTLETDGYRALQVTTGTKKANRITKPEAGHFAKAGVEAGRGLWEVRLADDEGEGIEVGAELNVDIFADVAKVDVTGQSKGKGFQGGIKRWNFHAQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDVVRVDAERNLLLVKGAVPGATNGNLIIKPAVKA

Annotated regions:
phrase: FADVAKVDVTGQSKGKGFQGGIK
type: CONSERVED_SITE
name: Ribosomal_uL3_CS
description: Large ribosomal subunit protein uL3, conserved site
Protein sequence:
MFKTVAVVGASGAVGRIILELLEEREFPAETFRFLSSARSAGTELVFNNQDYVFEELTKDSFKGVDLVIASTPDDTAAEFLPYAVEAGAKVIDESGYWRMHEDVALVVPEINPEAALNAKGIIASPNCSTTQMVLAMKPLYDISPIKRVIVSTYQATSGAGLVGTEDLIHSSQARLQGEEYDYKVFKQPIAFNAIPQIGSHKQDGYTSEEMKMVNETRKILGDPNIMINATCVRIPVWNCHSESITIETETPISPEQAREAFAAFPGIEVIDDLESGQYPMPYNSDGSDEVYIGRIRKDISHPNGLTFWCVSDNLRKGAATNAVQIAELLNKHRK

Annotated regions:
phrase: TVAVVGASGAVGRIILELLEEREFPAETFRFLSSARSAGTELVFNNQDYVFEELTKDSFKGVDLVIASTPDDTAAEFLPYAVEAGAKVIDESGYWRMHEDVALVVPEINPEA
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: TVAVVGASGAVGRIILELLEEREFPAETFRFLSSARSAGTELVFNNQDYVFEELTKDSFKGVDLVIASTPDDTAAEFLPYAVEAGAKVIDESGYWRMHEDVALVVPEINPEAALN
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: KPLYDISPIKRVIVSTYQATSGAGLVGTEDLIHSSQARLQGEEYDYKVFKQPIAFNAIPQIGSHKQDGYTSEEMKMVNETRKILGDPNIMINATCVRIPVWNCHSESITIETETPISPEQAREAFAAFPGIEVIDDLESGQYPMPYNSDGSDEVYIGRIRKDISHPNGLTFWCVSDNLR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: INATCVRIPVWNCH
type: CONSERVED_SITE
name: Asp-semialdehyde_DH_CS
description: Aspartate-semialdehyde dehydrogenase, conserved site
Protein sequence:
MSNTYGLERLGIINPGTIYRNLPMARLVEIALARGEGLLASNGALSVNTGKYTGRSPHDRYIVDTPAVHDSISWGAVNQPVSEATFERLYSRLTAYLQGKDLFVFDGFVGADPAYRMPIRIVNEYAWQNLFVHQLFIRPTAEELAGHEPRFTVICAPGFKAIPEEDGTRSEAFIILNFDRRLVIIGGTSYAGEMKKSIFTVMNYLLPEQGVCPMHCSANMGPAGDTALFFGLSGTGKTTLSADPERYLIGDDEHGWSDKGIFNFEGGCYAKCIKLSAEHEPQIWNAIRFGSVLENVMVDPDCRIIDYDSDALTENTRAAYPVDFIPNAVIPGVGGHPQTVVFLTADAFGVMPPIAKLTREQAMYYFLSGYTSKLAGTERGVTEPKATFSTCFGAPFLPRSPMVYANLLGERIARHNASVYLVNTGWTGGPYGTGRRMSLPYTRAMVRAALNGELDKVEFTPDPVFGFLVPKACPGVPAEILNPRNTWAETEKYDAMARKLASLFRENFAKFKDVPVSIQEAGVVG

Annotated regions:
phrase: LIGDDEHGWSDKGIF
type: CONSERVED_SITE
name: PEPCK_ATP_CS
description: Phosphoenolpyruvate carboxykinase (ATP), conserved site
Protein sequence:
MYQDLIRSELNEAAEVLNKFLSDDHNIAQIEAAAKMIADSFKQDGKVLSCGNGGSHCDAMHFAEELTGRYRDNRPGYAGIAISDPSHLSCVSNDFGYDFVFSRYVEAVGRKGDVLFGLSTSGNSGNILKAIEAAKAKGMKTVALTGKDGGKMAGLADVEIRVPHFGYADRIQEVHIKIIHIIIQLIEKEME

Annotated regions:
phrase: IADSFKQDGKVLSCGNGGSHCDAMHFAEELTGRYRDNRPGYAGIAISDPSHLSCVSNDFGYDFVFSRYVEAVGRKGDVLFGLSTSGNSGNILKAIEAAKAKGMKTVALTGKDGGKMAGLADVEIRVPHFGYADRIQEVHIKIIHIIIQLIEKEM
type: DOMAIN
name: SIS_dom
description: SIS domain

phrase: EAAEVLNKFLSDDHNIAQIEAAAKMIADSFKQDGKVLSCGNGGSHCDAMHFAEELTGRYRDNRPGYAGIAISDPSHLSCVSNDFGYDFVFSRYVEAVGRKGDVLFGLSTSGNSGNILKAIEAAKAKGMKTVALT
type: DOMAIN
name: SIS_dom
description: SIS domain
Protein sequence:
MTNSIRIGTRKSPLALIHTNLVIQQIKQFFPDINCKIVPIITSGDLIQNKPLYDIGGKALFLKEIEQALLDKKIDLAVHSLKDVPGRIPEPLVIAAVLEREDPRDVFVCLKYKSIEELPQNAVIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRLEAFNPEYCHLIEYSQMLPCIGQGVIAVEIRKDDNAMLKICNQINHLPTFELIKPERAFLEYLDANCRTPIAAYSQYLDADPRHLSKLAYRKAFEGNTEALATAAYKSDRTDASTGLTYKLPLEVEFGKMSNIQTDFMLGNLDGSKITFHTETTNIKTSTEAGIKAAKMMLEAICK

Annotated regions:
phrase: IRIGTRKSPLALIHTNLVIQQIKQFFPDINCKIVPIITSGDLIQNKPLYDIGGKALFLKEIEQALLDKKIDLAVHSLKDVPGRIPEPLVIAAVLEREDPRDVFVCLKYKSIEELPQNAVIGSSAVRRKAFIQKIRPDLKVTVFRGNVDSRIKKLMTGEVDATILAYTGLKRLEAFNPEYCHLIEYSQMLPCIGQGVIAVEIRKDDNAM
type: DOMAIN
name: Porphobilin_deaminase_N
description: Porphobilinogen deaminase, N-terminal

phrase: RHLSKLAYRKAFEGNTEALATAAYKSDRTDASTGLTYKLPLEVEFGKM
type: DOMAIN
name: RPE1
description: Rickettsial palindromic element 1

phrase: ERAFLEYLDANCRTPI
type: BINDING_SITE
name: Porphobilin_deaminase_cofac_BS
description: Porphobilinogen deaminase, dipyrromethane cofactor binding site

phrase: LIKPERAFLEYLDANCRTPIAAYSQYL
type: DOMAIN
name: Porphobilinogen_deaminase_C
description: Porphobilinogen deaminase, C-terminal
Protein sequence:
MNIFRFAGDLSHVFAIIILLLKIWKTRSCAGISGKSQILFAVVYLTRYLDLFTTYVSLYNSVMKVLFLATSGATVYLMYVKFKATYDHNHDSFRIEFLLVPCALLSLVINHEFTVMEVLWTFSIYLESVAILPQLFLVSRTGEAESITSHYLFALGSYRALYLLNWVYRYMVESHYDLIAIFAGVVQTVLYCDFFYLYITKVLKGKKLQLPA

Annotated regions:
Protein sequence:
MAKRDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDAQKRAAYDQYGHAAFEQGGMGGGFGGGFNGGADFSDIFGDVFGDIFGGGRGRQRAARGADLRYNMDLTLEEAVRGVTKEIRIPTLEECDVCHGSGAKAGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCHKCHGHGRVEKSKTLSVKIPAGVDTGDRIRLAGEGEAGEHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDGRVMLKVPSETQTGKLFRMRGKGVKSVRGGAQGDLLCRVVVETPVGLSEKQKQLLKDLQESFGGPTGEKNSPRSKSFFDGVKKFFDDLTR

Annotated regions:
phrase: YEILGVSKTAEEREIKKA
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: YKRLAMKYHPDRNQG
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: EAEAKFKEIKEAYEVLTDAQ
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: KRAAYDQYGHAAFEQGGMG
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: DYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDAQKRAAY
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: DYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDAQKRAAYDQY
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: RDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDAQ
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: GVTKEIRIPTLEECDVCHGSGAKAGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCHKCHGHGRVEK
type: DOMAIN
name: HSP_DnaJ_Cys-rich_dom
description: Heat shock protein DnaJ, cysteine-rich domain

phrase: CDVCHGSGAKAGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCHKCHGH
type: DOMAIN
name: HSP_DnaJ_Cys-rich_dom
description: Heat shock protein DnaJ, cysteine-rich domain

phrase: LRYNMDLTLEEAVRGVTKEIRIPTLEECDVCHGSGAKAGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCHKCHGHGRVEKSKTLSVKIPAGVDTGDRIRLAGEGEAGEHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAALGGEIEVPTLDGRVMLKVPSETQTGKLFRMRGKGVKSVRGGAQGDLLCRVVVET
type: DOMAIN
name: DnaJ_C
description: Chaperone DnaJ, C-terminal

phrase: FKEIKEAYEVLTDAQKRAA
type: CONSERVED_SITE
name: DnaJ_domain_CS
description: DnaJ domain, conserved site

phrase: DYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLT
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: CDVCHGSGAKAGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCHKCHGH
type: DOMAIN
name: HSP_DnaJ_Cys-rich_dom
description: Heat shock protein DnaJ, cysteine-rich domain
Protein sequence:
MAAADVEYRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQAQSRGGGGGGGGYGGGRGGGGYGGGRRDGGYGGGGGYGGRREGGGGGYGGGGGYGGRREGGGGGYGGGGGGWRD

Annotated regions:
phrase: RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: RCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQ
type: DOMAIN
name: RRM2_NsCP33-like
description: NsCP33-like, RNA recognition motif 2

phrase: YRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQAQ
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: FVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNI
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain
Protein sequence:
MPTDNDLKAAILELLRDLDVLLVAHFYQKDEIVELAHYTGDSLELAKIASQSDKNLIVFCGVHFMGESVKALAFDKQVIMPKLSCCSMARMIDSHYYDRSVHLLKECGVKEFYPITYINSNAEVKAKVAKDDGVVCTSRNASKIFNHALKQNKKIFFLPDKCLGENLALENGLKSAILGANSQEEIKNADVVCYNGFCSVHQLFKLEDIEFYRQKYPDILIAVHPECEPSVVSNADFSGSTSQIIEFVEKLSPNQKVAIGTESHLVNRLKAKRHHQNTFILSSTLALCPTMNETTLKDLFEVLKAYKNHRAYNTIELKDEVARLAKLALTKMMELS

Annotated regions:
Protein sequence:
MLNTLTRLLDDAGITLPEHQKAQLVAYVDMLNKWNKAYNLTSVRDPNEMLVRHIMDSIVVEPHLKGTRFIDVGTGPGLPGIPLAIVRPDSHFTLLDSLGKRVRFLRQVQHELKLDNITPVQSRVEAFPAEPPFDGVISRAFASLSDMVNWCHHLPGEEGRFYALKGQRPDDEISALPSGFAVEEIVRLSVPRLDGERHLVILKANRT

Annotated regions:
Protein sequence:
MGNARNIAFWVVLFLLILALFNLFSGSGGTLQSHEKTYTEFVSAVNSGEVSRVTLDGEQIRYRTNDGRDYITIKPGDAEVTELLIDKDIPVRAEKQQQSGFQSFIITLLPFLLLIGVWVYFMNRMQGGGKGGAMGFGKSKAKMLTEKHGRVTFDDVAGIDEAKEELEEIVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRHRGAGYGGGNDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDRQVTVANPDIKGREKILGVHARKTPLGPDVDLRIIARGTPGFSGADLANLVNEAALMAARVGRRFVTMEDFENAKDKVMMGSERRSMVLTAEQKEKTAYHEAGHAVVGLVLPECDPVYKATIIPRGGALGMVVSLPEMDRLNWHKDECEQKLAMTMAGKAAEIIKYGPDHVSNGPAGDIQQASQLARAMVMRWGMSDKVGNIDYAEAHEGYQGNTAGFSVSAHTKELIEEEVKRFIQEGYERAFQILNEHKEGWERLAQGLLEYETLTGEEIKRVMKGESPHESDDESGGSDTGRVPSVTAIPKTKIKKAPPEEGMEPEPTS

Annotated regions:
phrase: VIILAATNRKDVLDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: MVLTAEQKEKTAYHEAGHAVVGLVLPECDPVYKATIIPRGGALGMVVSLPEMDRLNWHKDECEQKLAMTMAGKAAEIIKYGPDHVSNGPAGDIQQASQLARAMVMRWGMSDKVGNIDYAEAHEGYQGNTAGFSVSAHTKELIEEEVKRFIQEGYERAFQILNEHKEGWERLAQGLLEYETLTGEEIKR
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: LLVGPPGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRHRGAGYGGGNDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDRQVT
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: DVDLRIIARGTPGFSGADLANLVNEAALMAARVGRRFVTMEDF
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: IPKGALLVGPPGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRHRGAGYGGGNDEREQTLNQLLVEMDGFEANEGVIILAATNRKDVLDPALLRPGRFDRQVTVANP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: AFWVVLFLLILALFNLFSGSGGTLQSHEKTYTEFVSAVNSGEVSRVTLDGEQIRYRTNDGRDYITIKPGDAEVTELLIDKDIPVRA
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular
Protein sequence:
MASTSVAAAEVKAQTTQAEEPVKVVRHQEVGHKSLLQSDALYQYILETSVYPREPEPMKELPRVTAKHPWNLMTTSADEGQFLGLLLKLINAKNTMEIGVYTGYSLLSTALALPDDGKILAMDINRENYDIGLPIIEKAGVAHKIDFREGPALPVLDELLKNEDMHGSFDFVFVDRDKDNYLNYHKRLIDLVKVGGLIAYDNTLWNGSVVAPPDAPLRKYVRYYRDFVMELNKALAVDPRIEISQIPVLDGVTLCRRVY

Annotated regions: