nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSFSVDVLANIAIELQRGIGHQDRFQRLITTLRQVLECDASALLRYDSRQFIPLAIDGLAKDVLGRRFALEGHPRLEAIARAGDVVRFPADSELPDPYDGLIPGQESLKVHACVGLPLFAGQNLIGALTLDGMQPDQFDVFSDEELRLIAALAAGALSNALLIEQLESQNMLPGEAAPFEAVKQTQMIGLSPGMTQLKKEIEIVAASDLNVLISGETGTGKELVAKAIHEASPRAVNPLVYLNCAALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRSLRVDVRVLAATNRDLREEVLAGRFRADLFHRLSVFPLSVPPLRERGDDVILLAGYFCEQCRLRLGLSRVVLSAGARNLLQHYNFPGNVRELEHAIHRAVVLARATRSGDEVILEAQHFAFPEVTLPPPEVAAVPVVKQNLREATEAFQRETIRQALAQNHHNWAACARMLETDVANLHRLAKRLGLKD

Annotated regions:
phrase: FPGNVRELE
type: CONSERVED_SITE
name: Sigma_54_int_dom_CS
description: Sigma-54 interaction domain, conserved site

phrase: GKFEMADNGTLFLDE
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_2
description: Sigma-54 interaction domain, ATP-binding site 2

phrase: VLISGETGTGKEL
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_1
description: Sigma-54 interaction domain, ATP-binding site 1

phrase: MIGLSPGMTQLKKEIEIVAASDLNVLISGETGTGKELVAKAIHEASPRAVNPLVYLNCAALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRSLRVDVRVLAATNRDLREEVLAGRFRADLFHRLSVFP
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: GHQDRFQRLITTLRQVLECDASALLRYDSRQFIPLAIDGLAKDVLGRRFALEGHPRLEAIARAGDVVRFPADSELPDPYDGLIPGQESLKVHACVGLPLFAGQNLIGALTLDGMQPDQFDVFSDEELRLIAALAAGALSNALLIEQL
type: DOMAIN
name: GAF
description: GAF domain

phrase: MIGLSPGMTQLKKEIEIVAASDLNVLISGETGTGKELVAKAIHEASPRAVNPLVYLNCAALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRSLRVDVRVLAATNRDLREEVLAGRFRADLFHRLSVFPLSVPPLRERGDDVILLAGYFCEQCRLRLGLSRVVLSAGARNLLQHYNFPGNVRELEHAIHRAV
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: SDLNVLISGETGTGKELVAKAIHEASPRAVNPLVYLNCAALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRSLRVDVRVLAATNRDLREEVLAGRFRADLFHRLS
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: QDRFQRLITTLRQVLECDASALLRYDSRQFIPLAIDGLAKDVLGRRFALEGHPRLEAIARAGDVVRFPADSELPDPYDGLIPGQESLKVHACVGLPLFAGQNLIGALTLDGMQPDQFDVFSDEELRLIAALA
type: DOMAIN
name: GAF
description: GAF domain
Protein sequence:
MRAFRIAYDGTGFRGFQRQPHGETVENALFEALSSLGVAFEDGRPPGYAAAGRTDAGVSARAQTVAFEAPAWLLPRALNGELPASVRAWAAADVGDAFHATHDATARAYRYFLYAPEPSADTTRARAACARLSGSHDFHNFTPDDRGTERTLSMRLRRQGPFLVVDCRAGGFARQLVRRLVAAVAAVARGERPLSFLGRALDDDPLSGADGIAAAPPEPLLLADVVYPGVEFTVDDRAAESARTVFATRRRQRLADARVAGALSPPE

Annotated regions:
phrase: ACARLSGSHDFHNFTPDDRGTERTLSMRLRRQGPFLVVDCRAGGFARQLVRRLVAAVAAVARGERPLSFLGRALDDDPLSGADGIAAAPPEPLLLADVVY
type: DOMAIN
name: PsdUridine_synth_TruA_a/b_dom
description: Pseudouridine synthase I, TruA, alpha/beta domain
Protein sequence:
MVSRLEHPAGGYKKVFESCEELAEPIPAHVSGEIPAWLSGSLLRMGPGLFEVGDEPFYHLFDGQALLHKFDLKDGRVTYHRRFIRTDAYVRAMTEKRVVITEFGTTAYPDPCKNIFSRFFTYFQGIEVTDNCLVNIYPIGEDFYACTETNFITKVDPDTLETVKKVDLCNYLSVNGLTAHPHIEADGTVYNIGNCFGKNMSLAYNIVKIPPLQEDKSDQFEKSKILVQFPSSERFKPSYVHSFGITENHFVFVETPVKINLLKFLTSWSIRGSNYMDCFESNDKMGTWFHLAAKNPGKYIDHKFRTSAFNIFHHINCFEDQGFIVVDLCTWKGHEFVYNYLYLANLRQNWEEVKKAALRAPQPEVRRYVLPLDIHREEQGKNLVSLPYTTATAVMRSDGTVWLEPEVLFSGPRQAFEFPQINYSKFNGKDYTFAYGLGLNHFVPDRICKLNVKSKETWIWQEPDAYPSEPLFVQSPDAEDEDDGVLLSIVVKPGVSQRPAFLLILKATDLTEIARAEVDVLIPVTLHGIYKP

Annotated regions:
Protein sequence:
MVGTWFLCRGFTTLAGLLLLPFGSLAASQIEDQAEQFFRSGHTNNWAVLVCTSRFWFNYRHVANTLSVYRSVKRLGIPDSHIVLMLADDMACNPRNPKPATVYSHKNMELNVYGDDVEVDYRSYVVTVENFLRVLTGRIPPSTPRSKRLLSDDRSNILIYMTGHGGNGFLKFQDSEEITNIELADAFEQMWQKRRYNELLFIIDTCQGASMYERFYSPNIMALASSQVGEDSLSHQPDPAIGVHLMDRYTFYVLEFLEEINPASQTNMNDLFQVCPKSLCVSTPGHRTDPFQRDPKHVLITDFFGSVRKVEITTETISLQPDSGIMKSSHEKAGMDEELMEPLKYAEQLPVAQIIHQKPKLKDWHPPGGFILGLWALIIMVFFKTYGIKHMKFIF

Annotated regions:
Protein sequence:
MKQYTIAILGATGAVGTQMLQCLDEQEIPVGELRLLASARSAGKTVEFRGATVTIQEARPEAFEGCDFVLGAADDAIAKELLPEAVKAGAVVVDNSHAFRMDPEVPLVVPEINGADVAWHKGIIANPNCATIIGLVPTWPLHQLAGVTRMVVSTYQAASGAGAPGMAELEAQMAALGRGEELPEPRAFAAQLVSNLIPQIGGFKEEGYTSEEMKLQNEGRKIMHLPELRVNCTCVRVPVLRSHSESITLEFERDITLEEAREALAAAPGVKLVDDREAENAHDRFPMPIDTSDQDLIWVGRVRRDISNPEPNRGITFWCCGDQIRKGAATNAVQILRLLIG

Annotated regions:
phrase: VNCTCVRVPVLRSH
type: CONSERVED_SITE
name: Asp-semialdehyde_DH_CS
description: Aspartate-semialdehyde dehydrogenase, conserved site

phrase: PLHQLAGVTRMVVSTYQAASGAGAPGMAELEAQMAALGRGEELPEPRAFAAQLVSNLIPQIGGFKEEGYTSEEMKLQNEGRKIMHLPELRVNCTCVRVPVLRSHSESITLEFERDITLEEAREALAAAPGVKLVDDREAENAHDRFPMPIDTSDQDLIWVGRVRRDISNPEPNRGITFWCCGDQIR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: TIAILGATGAVGTQMLQCLDEQEIPVGELRLLASARSAGKTVEFRGATVTIQEARPEAFEGCDFVLGAADDAIAKELLPEAVKAGAVVVDNSHAFRMDPEVPLVVPEINGADVAW
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: IAILGATGAVGTQMLQCLDEQEIPVGELRLLASARSAGKTVEFRGATVTIQEARPEAFEGCDFVLGAADDAIAKELLPEAVKAGAVVVDNSHAFRMDPEVPLVVPEINGADV
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MHNVYQMRKESCVKFEAQPHLFVKPRSIPNWDYPDMVKEAVTKALVDAKLQYKDIEQAVVSYLYGGTCCGQRALYEIGLTGIPIFNVNNACASGSSGVYLCKQILESGSADVVMAVGFEKMAPGSLEAMQGNMDERAQPVEKHIEVMAETYGLFPAPITAQINSQFQKAYTLEEVLNARKIYDFMGLLECSPTSDGAAAAVLCSERYLLQHPELRSQAVEILGMHMIGFDMIRKISADLYRRTGINPEDVQVIELHDCFAPNELITYEALGLCPIGKGGEIVDRRDNTYGGKWVINPSGGLISKGHPIGATGVAQVVELSTQLRGLAGRRQVPNCMVAVQHNIGIGGAGVVAMYRLADGAATRATVNDVVKPSAQTRFASDVIFEEVKDRVAEEKDLVKALNSSFRITITGGPNGGVKKWTIDCKSDPPFVGERVGDVDIEIIVSDSDFIQLASGKLKPDQAFMQGRMKLKGNVAKAMRIRSLLDPKLLKAKL

Annotated regions:
phrase: NPSGGLISKGHPIGAT
type: CONSERVED_SITE
name: Thiolase_CS
description: Thiolase, conserved site

phrase: VNNACASGSSGVYLCKQI
type: ACTIVE_SITE
name: Thiolase_acyl_enz_int_AS
description: Thiolase, acyl-enzyme intermediate active site

phrase: YPDMVKEAVTKALVDAKLQYKDIEQAVVSYLYGGTCCGQRALYEIGLTGIPIFNVNNACASGSSGVYLCKQILESGSADVVMAVGFEKMAPGSLEAMQGNMDERAQPVEKHIEVMAE
type: DOMAIN
name: Thiolase_N
description: Thiolase, N-terminal

phrase: MHMIGFDMIRKISADLYRRTGINPEDVQVIELHDCFAPNELITYEALGLCPIGKGGEIVDRRDNTYGGKWVINPSGGLISKGHPIGATGVAQVVELSTQLRGLAGRRQVPNCMVAVQHNIG
type: DOMAIN
name: Thiolase_C_2
description: Thiolase, C-terminal domain 2

phrase: FEEVKDRVAEEKDLVKALNSSFRITITGGPNGGVKKWTIDCKSDPPFVGERVGDVDIEIIVSDSDFIQLASGKLKPDQAFMQGRMKLKGNVAKAMRIRSLL
type: DOMAIN
name: SCP2_sterol-bd_dom
description: SCP2 sterol-binding domain
Protein sequence:
MIEGLLGRKIGMTQVFDPTGQVIPVTIIEVGPCVVTQIRTKERDGYEAVQIGYQEVRAKSLTKPEQGHLRGAGKLLRHLREFRTDNIADHKVGDVLTVEMFAPGQRVDVIGTSKGRGFQGVVKRHGFGGGPRTHGQSDRLRAPGSIGAGTDPGHLWKNTRMAGRMGNQRVTVQNLTVVDVVPERNLLLVRGSVPGANNGLVMVRRAIKGS

Annotated regions:
phrase: FAPGQRVDVIGTSKGRGFQGVVK
type: CONSERVED_SITE
name: Ribosomal_uL3_CS
description: Large ribosomal subunit protein uL3, conserved site
Protein sequence:
MNGIRDVVREEQPRERLLLEGAGSLSNRELLAVLLRTGSKEETVLKLSDKILHQFDGLRMLKDATLEELISIHGIGISKASQLMAAFELGRRMVRLEYQNRYSIRSPEDCAKYMMEEMRFLQQEHFVCLYLNTKNQVLHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPTPSREDIEVTKRLVECGQIIGIEVLDHIIIGDHKFVSLKEKGHI

Annotated regions:
phrase: HNHPS
type: CONSERVED_SITE
name: UPF0758_CS
description: Uncharacterised protein family UPF0758, conserved site

phrase: IRDVVREEQPRERLLLEGAGSLSNRELLAVLLRTGSKEETVLKLSDKILHQFDGLRMLKDATLEELISIHGIGISK
type: DOMAIN
name: UPF0758_N
description: UPF0758, N-terminal

phrase: EDCAKYMMEEMRFLQQEHFVCLYLNTKNQVLHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPTPSREDIEVTKRLVECGQIIGIEVLDHIIIGDHKFVSL
type: DOMAIN
name: RadC_JAB
description: RadC-like JAB domain

phrase: SIRSPEDCAKYMMEEMRFLQQEHFVCLYLNTKNQVLHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPTPSREDIEVTKRLVECGQIIGIEVLDHIIIGDHKFVSLKEKGH
type: DOMAIN
name: MPN
description: MPN domain

phrase: IRSPEDCAKYMMEEMRFLQQEHFVCLYLNTKNQVLHRQTIFIGSLNTSIVHPREVFKEAFRRAAASIICLHNHPSGDPTPSREDIEVTKRLVECGQIIGIEVLDHIIIGDHKFVSLKEK
type: DOMAIN
name: RadC_JAB
description: RadC-like JAB domain
Protein sequence:
MSYEEDDWFSYRTEFNKRADSPRAAGNYDFESGNIDNIPLNDDGPLSPSQDFDLAGTLEEYESYDLRLSPNGGLNREDQQPGPSGNNDGQYHVMQNNDSFAQHMQSSNTIEYNSFEMPTVINSNHDVGPYQDLGIDDPNSFYANQQPSTSQGNDMIINENYEMMGPSTSYMPQIDHMNPSGNSSSQINHQQGMIVPQVQQQPAKPKTTKKRPPPKKKTAAQAPDTVGTVLTKVNKLTQQIDNNNDNQEQKIETRISAEDLVRVSALLSRLDVYQKEQAQGNNTHDQDIEALQAEIAQVFTKNMAMSANDAPGNSILSQIQNLTSIGSSASSSAQPSQPAKKAAPKRKTVPNTAKNLAQNQQIMPPQAQITPTKLVMDPPTTTMVPSSSQSNHMYSNDGFTTYNQMDEPGTSQQQQYNDYRQPPSQESMQYGHQQIIQARVVPSMNQKTHNYRQAVVFASPNTNGPSSQLQRPQSGMDQMQDQQYHAQDLQGSQVQQTFVSVQHDGQIYQEVEPTLRDFVRQGRYQGPQDAPHLRQQLITNVNATTNKQMVHRSQDPTPSPGNLQQFGEPLQRHGSYPHSHDMRPNSHSQSQHSYSNHYDGATEFFDVSMQHQDSQMSQIQPGSQHYVQQQELYHPIGDQQQMVEPESEYPVPQVTNELSEEELRAIMEEKRQIRQKRLKDIMIDQLNRLEEPVDVTPFRNKMDVLERLLPYHHFANEEEPVSDFDSTFQRVMDNAVHQANSIGNRIRNIVLRDTMRSSTEWEENMILF

Annotated regions:
phrase: DVTPFRNKMDVLERLLPYHHFANEEEPVSDFDSTFQRVMDNAVHQANSIGNRIRNIVLRDTMRSSTEWEENM
type: DOMAIN
name: GSCR1_dom
description: GLTSCR protein, conserved domain
Protein sequence:
MNRLPSSASALACSAHALNLIEKRTLNHEEMKALNREVIDYFKEHVNPGFLEYRKSVTAGGDYGAVEWQAGSLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALAPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRRPFMPLLPGFRHVPFGNIDAMSMAFSEGKKTGDEIAAVILEPIQGEGGVILPPQGYLTEVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDTLLDGFRQLAREYPNLVHDARGKGMLMAIEFVDNETGYRFASEMFRQRVLVAGTLNNAKTTRIEPPLTLTIELCEQVLKSARNALAAMQVSVEEV

Annotated regions:
phrase: MILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGG
type: CONSERVED_SITE
name: Aminotrans_3_PPA_site
description: Aminotransferases class-III pyridoxal-phosphate attachment site
Protein sequence:
MERLLIVNADDFGLSKGQNYGIIEACRNGIVTSTTALVNGQAIDHAVQLSRDEPSLAIGMHFVLTMGKPLTAMPGLTRDGVLGKWIWQLAEEDALPLEEITQELVSQYLRFIELFGRKPTHLDSHHHVHMFPQIFPIVARFAAEQGIALRADRQMAFDLPVNLRTTQGFSSAFYGEEISESLFLQVLDDAGHRGDRSLEVMCHPAFIDNTIRQSAYCFPRLTELDVLTSASLKGAIAQRGYRLGSYRDV

Annotated regions:
Protein sequence:
MTMGLSTFLKSLDIFSDLNDRERFILAENAQGIEYAPDAAIIKRGEIGRFLWIVQEGEVKVILPPSGSAGEITILLKTGSLFGEMSIMTGEPASADVMAATACRLIKIPRDAVSQLIAGNPKTLGKFARLITERMLSNARVAAQQDLQQSAHQVNEDPYDLNFSSASEPLKILVLNSGSSSLKYSLFDTIQNQPLLEGEIEKIGSGDAAHQIRTPQTKRKDPQPSVMNMSDAFDVMIRTLTDPEFAAIDRLSDLNAVGHRVVHGGGQFSNAVVINENVIASIRSSCSLAPLHNPYNLEGIERMQLLLPDIRQVAVFDTAFHQTMPSHAYTYALPHEICEKEQVRRYGFHGTNHEYVALRAATWLKRPLGELKIISCHLGNGASLCAIDHGRSIDTSMGMTPLEGLIMGTRPGDVDPGVILHLMKGASLNFENMDRMLNKESGLKGISGKNDMREILAGAEQGDVQCTRAVSAFCYRIRKYIGAYVAALGGLDVLIFTAGIGANSSEIRAGICQGLDLFGIYLLKDRNLHSVDQGQVLDVSAPDARVRILVIPADEERMIARKTLHAMGRVRTVEETRMLRSKPVPISVSAHHVHLSQPDFEQLFGQGKTMTPRSDLTQPGQFACQETVNLIGPKGRVSRVRILGPSRKESQVEISRTEEFQLGIDAPVRESGDLAGTPGITIEGEAGRIELEKGVICAKRHIHMSPEDALGFGLRNRDVVRLGVRGERGLIFGDVVIRVNPNFRLDMHIDTDEANAAEISIGASGFID

Annotated regions:
phrase: ILVLNSGSSSL
type: CONSERVED_SITE
name: Aliphatic_acid_kinase_CS
description: Aliphatic acid kinase, short-chain, conserved site

phrase: IFSDLNDRERFILAENAQGIEYAPDAAIIKRGEIGRFLWIVQEGEVKVILPPSGSAGEITILLKTGSLFGEMSIMTGEPASADVMAATACRLIKIPRDAVSQLIAGN
type: DOMAIN
name: cNMP-bd_dom
description: Cyclic nucleotide-binding domain

phrase: IFSDLNDRERFILAENAQGIEYAPDAAIIKRGEIGRFLWIVQEGEVKVILPPSGSAGEITILLKTGSLFGEMSIMTGEPASADVMAATACRLIKIPRDAVSQL
type: DOMAIN
name: cNMP-bd_dom
description: Cyclic nucleotide-binding domain

phrase: EYAPDAAIIKRGEIGRFLWIVQEGEVKVILPPSGSAGEITILLKTGSLFGEMSIMTGEPASADVMAATACRLIKIPRDAVSQLI
type: DOMAIN
name: cNMP-bd_dom
description: Cyclic nucleotide-binding domain

phrase: IFSDLNDRERFILAENAQGIEYAPDAAIIKRGEIGRFLWIVQEGEVKVILPPSGSAGEITILLKTGSLFGEMSIMTGEPASADVMAATACRLIKIPRDAVSQLIAGNPKTLGKFARLITER
type: DOMAIN
name: cNMP-bd_dom
description: Cyclic nucleotide-binding domain

phrase: IISCHLGNGASLCAIDH
type: CONSERVED_SITE
name: Aliphatic_acid_kinase_CS
description: Aliphatic acid kinase, short-chain, conserved site
Protein sequence:
MPSMDIVSEVDEEELRNAVENSRREVAGRFDLRGKEIEIDLKDNVVTLKSEDDFICKQLVDILRIQLSKRNVDPSSMEVDEKAVHSGKTFSLKVNFKQGIDSLVAKKLVKAIKDSKLKVQAAIQGDSVRITGKKRDDLQAVMRLAKESELGQPFQFDNFRD

Annotated regions:
Protein sequence:
MADYVIQNLTSNLQAMQYAYSSREEMPVWATKLLTPIFMAVAVLTTLPPPGPLRVIVGLTAFTSLWLHVLTHWVSGPAFFMDAIFMISITVRWLLMFVAGTPEIDYHQTTQSGTTITHKGTKDSSTLRQGLTKLRWSVELWSCWRGQGWNFVDQHLPRGAERTQSRWEFLVSNAGRVLLNQYISDLVRKYAFCALWPAQVDAHVDFSSLPLLNRHGLVALQLIRDSLMLDSEYRKASILFVGLHLSTPDRWPSLFGNMRDLYTVRNFWGRVWHQIFRQIFTRCGDIVANALNAQKGTLLYKYSRLYVGFLVSGVQHYACALLIPSAEYGWGMFWQMPAYAAVVTVEDILKYYGREAGIQDGNFVRFLGYIWTAYWMTLIYALPVGFVSDIGGFTGDGNFQLSDPCVSCSSTSIPVSGFESIDLEFGLW

Annotated regions:
phrase: WPSLFGNMRDLYTVRNFWGRVWHQIFRQIFTRCGDIVANALNAQKGTLLYKYSRLYVGFLVSGVQHYACALLIPSAEY
type: DOMAIN
name: Wax_synthase_dom
description: Wax synthase domain
Protein sequence:
MFEKFTNRAKQVIKLAKKEAQRLNHNYLGTEHILLGLLKLGQGVAVNVLRTLGVDFDTAKHEVERLIGYGPEIQVCGDPALTGRVKKSFESANEEAALLEHNYVGTEHLLLGILNQSDGVALQVLENLHVDPKEIRKEILKELETFNLQLPPSSSITPRNTNSSSSSKSSSPLGGHTLGGDKPEKLSALKAYGYDLTEMFKESRLDPVIGRSAEVERLILILCRRRKNNPVLVGEAGVGKTAIVEGLAQKIVSGEVPEALRKKRLITLDLALMIAGTKYRGQFEERIKAVMDEVRKHGNILLFIDELHTIVGAGAAEGAIDASHILKPALARGEIQCIGATTLDEYRKHIEKDAALERRFQKIVVQPPSVDETVEILRGLKKKYEEHHNVFITDEALVAAAKLSDQYVHGRFLPDKAIDLLDEAGARVRVNTMGQPSDLVRLEAEIEKTKQAKEQAIGTQEYEKAASLRDEEKKLREKLGNMKQQWESNKEEHQVPVDEEAVAQVVSVQTGIPAARLTEAESEKLLTLETTLQKKVIGQSQAVASICRAIRRSRTGIKDPNRPMGSFLFLGPTGVGKTLLAQQIAIEMFGGEDSLIQVDMSEYMEKFAATKMMGSPPGYVGHEEGGHLTEQVRRRPYCVVLFDEIEKAHPDIMDLMLQILEQGRLTDSFGRKIDFRNTIIIMTSNLGADLIRKSGEIGFGLRSHMDYAVIKEKIDAAVKKHLKPEFINRLDESVIFKPLEKEALSEIIHLEINKLGSRLQNYQMDLNIPDSVISFLVTKGHSPEMGARPLRRVVEQYLEDPLAEMLLKESCRQEARKLRARLTEERVVFEREEEAVSALAIEGDGSEPITADES

Annotated regions:
phrase: ANEEAALLEHNYVGTEHLLLGILNQSDGVALQVLENLHVDPKEIRKEILKE
type: DOMAIN
name: Clp_R_dom
description: Clp, repeat (R) domain

phrase: AKKEAQRLNHNYLGTEHILLGLLKLGQGVAVNVLRTLGVDFDTAKHEVERLI
type: DOMAIN
name: Clp_R_dom
description: Clp, repeat (R) domain

phrase: LEKEALSEIIHLEINKLGSRLQNYQMDLNIPDSVISFLVTKGHSPEMGARPLRRVVEQYLEDPLAEMLLKESCR
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal

phrase: LEKEALSEIIHLEINKLGSRLQNYQMDLNIPDSVISFLVTKGHSPEMGARPLRRVVEQYLEDPLAEMLLKESCRQEARKLRARLTEERVV
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal

phrase: FEKFTNRAKQVIKLAKKEAQRLNHNYLGTEHILLGLLKLGQGVAVNVLRTLGVDFDTAKHEVERLIGYGPEIQVCGDPALTGRVKKSFESANEEAALLEHNYVGTEHLLLGILNQSDGVALQVLENLHVDPKEIRKEILKELE
type: DOMAIN
name: Clp_R_dom
description: Clp, repeat (R) domain

phrase: RPMGSFLFLGPTGVGKTLLAQQIAIEMFGGEDSLIQVDMSEYMEKFAATKMMGSPPGYVGHEEGGHLTEQVRRRPYCVVLFDEIEKAHPDIMDLMLQILEQGRLTDSFGRKIDFRNTIIIMTSNLGADLIRKSGEIGFGLRSHMDYAVIKEKIDAAVKKHLKPEFINRLD
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: SVDETVEILRGLKKKYEEHHNVFITDEALVAAAKLSDQYVHGRFLPDKAIDLLDEAGARVRVNTMGQPSDLVRLEAEIEKTKQAKEQAIGTQEYEKAASLRD
type: DOMAIN
name: ClpA/ClpB_AAA_lid
description: ClpA/ClpB, AAA lid domain

phrase: EAEIEKTKQAKEQAIGTQEYEKAASLRDEEKKLRE
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: PMGSFLFLGPTGVGKTLLAQQIAIEMFGGEDSLIQVDMSEYMEKFAATKMMGSPPGYVGHEEGGHLTEQVRRRPYCVVLFDEIEKAHPDIMDLMLQILEQGRLTDSFGRKIDFRNTIIIMTSNLGADLIRKSGEIGFGLRSHMDYAVI
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: RKNNPVLVGEAGVGKTAIVEGLAQKIVSGEVPEALRKKRLITLDLALMIAGTKYRGQFEERIKAVMDEVRKHGNILLFIDELHTIVGAGAAEGAIDASHILKPALARGEIQCIGATTLDEYRKHIEKDAALERRFQKIVVQPPS
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VLVGEAGVGKTAIVEGLAQKIVSGEVPEALRKKRLITLDLALMIAGTKYRGQFEERIKAVMDEVRKHGNILLFIDELHTIVGAGAAEGAIDASHILKPALARGEIQCIGATTLDEYRKHIEKDAALERRFQKI
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core
Protein sequence:
MTGLPRLVVASANPDKVAEIALVLDGLVDLEPRPPQVPDVVEDGDTLEANARLKAVAICVATGRAAVADDTGLEVDALGGAPGVHSARYAGEECDAGANTARLLAELAGVPAGRRTARFRTVALVRRPDGTEVQATGTVEGHIAAGPSGGGGFGYDPVFVPVEGDGRTFAEMGDEKHAVSHRGRAFRDLARRLAAET

Annotated regions:
Protein sequence:
MRAVIPYKKAGAKSRLSPVLSLEEREEFVELMLNQVIDSLRGAGIEKIDILSPSVYGLEDMTKARVLLDEDDLNEALNRYLAGSEEPVLIVMADLPLLAPAHIKGISSTEKDVCIVPGKGGGTNALFIKNPSRYRVKYYGSSFLTHCSIATDTGQNFEIYDSFLAGTDIDEPEDLVELLIHGKGPAKEYISRKFRLEVSRGRVGLVLL

Annotated regions:
Protein sequence:
MWLLGPLCLLLSSAAESQLLPGNNFTNECNIPGNFMCSNGRCIPGAWQCDGLPDCFDKSDEKECPKAKSKCGPTFFPCASGIHCIIGRFRCNGFEDCPDGSDEENCTANPLLCSTARYHCKNGLCIDKSFICDGQNNCQDNSDEESCESSQEPGSGQVFVTSENQLVYYPSITYAIIGSSVIFVLVVALLALVLHHQRKRNNLMTLPVHRLQHPVLLSRLVVLDHPHHCNVTYNVNNGIQYVASQAEQNASEVGSPPSYSEALLDQRPAWYDLPPPPYSSDTESLNQADLPPYRSRSGSANSASSQAASSLLSVEDTSHSPGQPGPQEGTAEPRDSEPSQGTEEV

Annotated regions:
phrase: CIIGRFRCNGFEDCPDGSDEEN
type: CONSERVED_SITE
name: LDLR_class-A_CS
description: Low-density lipoprotein (LDL) receptor class A, conserved site

phrase: ECNIPGNFMCSNGRCIPGAWQCDGLPDCFDKSDEKEC
type: REPEAT
name: LDrepeatLR_classA_rpt
description: Low-density lipoprotein (LDL) receptor class A repeat

phrase: LCSTARYHCKNGLCIDKSFICDGQNNCQDNSDEESC
type: REPEAT
name: LDrepeatLR_classA_rpt
description: Low-density lipoprotein (LDL) receptor class A repeat

phrase: CSTARYHCKNGLCIDKSFICDGQNNCQDNSDEES
type: REPEAT
name: LDrepeatLR_classA_rpt
description: Low-density lipoprotein (LDL) receptor class A repeat

phrase: CGPTFFPCASGIHCIIGRFRCNGFEDCPDGSDEEN
type: REPEAT
name: LDrepeatLR_classA_rpt
description: Low-density lipoprotein (LDL) receptor class A repeat

phrase: CIDKSFICDGQNNCQDNSDEES
type: CONSERVED_SITE
name: LDLR_class-A_CS
description: Low-density lipoprotein (LDL) receptor class A, conserved site

phrase: KCGPTFFPCASGIHCIIGRFRCNGFEDCPDGSDEEN
type: REPEAT
name: LDrepeatLR_classA_rpt
description: Low-density lipoprotein (LDL) receptor class A repeat

phrase: CSTARYHCKNGLCIDKSFICDGQNNCQDNSDEES
type: REPEAT
name: LDrepeatLR_classA_rpt
description: Low-density lipoprotein (LDL) receptor class A repeat

phrase: ECNIPGNFMCSNGRCIPGAWQCDGLPDCFDKSDEKE
type: REPEAT
name: LDrepeatLR_classA_rpt
description: Low-density lipoprotein (LDL) receptor class A repeat

phrase: PGNFMCSNGRCIPGAWQCDGLPDCFDKSDEKE
type: REPEAT
name: LDrepeatLR_classA_rpt
description: Low-density lipoprotein (LDL) receptor class A repeat

phrase: GRCIPGAWQCDGLPDCFDKSD
type: REPEAT
name: LDrepeatLR_classA_rpt
description: Low-density lipoprotein (LDL) receptor class A repeat

phrase: IHCIIGRFRCNGFEDCPDGSD
type: REPEAT
name: LDrepeatLR_classA_rpt
description: Low-density lipoprotein (LDL) receptor class A repeat

phrase: GLCIDKSFICDGQNNCQDNSD
type: REPEAT
name: LDrepeatLR_classA_rpt
description: Low-density lipoprotein (LDL) receptor class A repeat

phrase: KCGPTFFPCASGIHCIIGRFRCNGFEDCPDGSDEENC
type: REPEAT
name: LDrepeatLR_classA_rpt
description: Low-density lipoprotein (LDL) receptor class A repeat

phrase: KCGPTFFPCASGIHCIIGRFRCNGFEDCPDGSDEENCT
type: REPEAT
name: LDrepeatLR_classA_rpt
description: Low-density lipoprotein (LDL) receptor class A repeat

phrase: LCSTARYHCKNGLCIDKSFICDGQNNCQDNSDEESCE
type: REPEAT
name: LDrepeatLR_classA_rpt
description: Low-density lipoprotein (LDL) receptor class A repeat

phrase: ECNIPGNFMCSNGRCIPGAWQCDGLPDCFDKSDEKECP
type: REPEAT
name: LDrepeatLR_classA_rpt
description: Low-density lipoprotein (LDL) receptor class A repeat
Protein sequence:
MAEETPTRSPGGAAVLDKAPERVRKRSPRYKVLLHNDPVNSMEYVMTTLRQVVPQLSEQDAMAVMLEAHNTGVGLVIVCDIEPAEFYCETLKSKGLTSSIEPED

Annotated regions:
phrase: KRSPRYKVLLHNDPVNSMEYVMTTLRQVVPQLSEQDAMAVMLEAHNTGVGLVIVCDIEPAEFYCETLKS
type: DOMAIN
name: ClpS_core
description: Adaptor protein ClpS, core
Protein sequence:
MDDIDSSDGAAAARAGEIGSIGVSTPWKPIQLVFKRYLPQNGSASKVHVAVKKPVVVRLTRDLVETYKICDPQFKYRGELNPKRYLTTPSVGVNNDGFDNVNYDLILAVNDDFCSSDSRQRYIVKDLLGHGTFGQVAKCWVPETNSFVAVKVIKNQLAYYQQALVEVSILTTLNKKYDPEDKNHIVRIYDYFLHQSHLCICFELLDMNLYELIKINQFRGLSLSIVKLFSKQILLGLALLKDAGIIHCDLKPENILLCASVKPTEIKIIDFGSACMEDKTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGGSEFDILRRMIEILGKQPPDYVLKEAKNTNKFFKCVGSVHNLGNGGTYGGLKSAYMALTGEEFEAREKKKPEIGKEYFNHKNLEEIVKSYPYKINLPEDDVVKETQIRLALIDFLKGLMEFDPAKRWSPFQAAKHPFITGEPFTCPYNPPPETPRVHVTQNIKVDHHPGEGHWFAAGLSPHVSGRTRIPMHNSPHFQMMPYSHANSYGSIGSYGSYNDGTIQDNSYGSYGGTGNMFAYYSPVNHPGLYMQNQGGVSMLGTSPDARRRVMQYPHGNGPNGLGTSPSAGNFAPLPLGTSPSQFTPNTNNQFLAGSPGHHGPTSPVRNSCHGSPLGKMAAFSQINRRMSAGYSGGSQSQDSSLSQAQGHGMDNFYQNEGYSGQFSGSPSRRQLDSGVKNRKQTQGGTTLSTGYSTHNNANSSLRSNMYNPSSTAHHLENPDTALS

Annotated regions:
phrase: YIVKDLLGHGTFGQVAKCWVPETNSFVAVKVIKNQLAYYQQALVEVSILTTLNKKYDPEDKNHIVRIYDYFLHQSHLCICFELLDMNLYELIKINQFRGLSLSIVKLFSKQILLGLALLKDAGIIHCDLKPENILLCASVKPTEIKIIDFGSACMEDKTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGGSEFDILRRMIEILGKQPPDYVLKEAKNTNKFFKCVGSVHNLGNGGTYGGLKSAYMALTGEEFEAREKKKPEIGKEYFNHKNLEEIVKSYPYKINLPEDDVVKETQIRLALIDFLKGLMEFDPAKRWSPFQAAKHPF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: YIVKDLLGHGTFGQVAKCWVPETNSFVAVKVIKNQLAYYQQALVEVSILTTLNKKYDPEDKNHIVRIYDYFLHQSHLCICFELLDMNLYELIKINQFRGLSLSIVKLFSKQILLGLALLKDAGIIHCDLKPENILLCASVKPTEIKIIDFGSACMEDKTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGGSEFDILRRMIEILGKQPPDYVLKEAKNTNKFFKCVGSVHNLGNGGTYGGLKSAYMALTGEEFEAREKKKPEIGKEYFNHKNLEEIVKSYPYKINLPEDDVVKETQIRLALIDFLKGLMEFDPAKRWSPFQAAKHPF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: IIHCDLKPENIL
type: ACTIVE_SITE
name: Ser/Thr_kinase_AS
description: Serine/threonine-protein kinase, active site

phrase: YIVKDLLGHGTFGQVAKCWVPETNSFVAVKVIKNQLAYYQQALVEVSILTTLNKKYDPEDKNHIVRIYDYFLHQSHLCICFELLDMNLYELIKINQFRGLSLSIVKLFSKQILLGLALLKDAGIIHCDLKPENILLCASVKPTEIKIIDFGSACMEDKTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGGSEFDILRRMIEILGKQPPDYVLKEAKNTNKFFKCVGSVHNLGNGGTYGGLKSAYMALTGEEFEAREKKKPEIGKEYFNHKNLEEIVKSYPYKINLPEDDVVKETQIRLALIDFLKGLMEFDPAKRWSPFQAAKHPF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: LGHGTFGQVAKCWVPETNSFVAV
type: BINDING_SITE
name: Protein_kinase_ATP_BS
description: Protein kinase, ATP binding site
Protein sequence:
MQDIFALPIEELQELFVAAGLKKFRAKQVFQWLYQKSVFDFAAMHNLSKADIAVLQEKFTVLPRSLKILREQNSSDGMTSKLLLGLPDGNSVETVLMHHDYGYSVCVSSQVGCDMHCAFCASGLKGAVRNLTAAEIVAQVYLFNERLREQGAMVSRVVVMGSGEPMLNFDSVLQALDFLHREDTCNMSYRNMTLSTCGIIPGIKRLEEQGKPINLAISLHAVKNELRTALMPVNKGYPFVDVLTAAESYSKASGRQITYEYILLKGKNDSPQDAELLSNYLRYKQASVNLIPANPVPEQGFERPSKAAVERFLRILQKNRINATVRKEMGKDIDAACGQLRAKFAKEQEQK

Annotated regions:
phrase: IFALPIEELQELFVAAGLKKFRAKQVFQWLYQKSVFDFAAMHNLSKADIAVLQE
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: HDYGYSVCVSSQVGCDMHCAFCASGLKGAVRNLTAAEIVAQVYLFNERLREQGAMVSRVVVMGSGEPMLNFDSVLQALDFLHREDTCNMSYRNMTLSTCGIIPGIKRLEEQGKPINLAISLHAVKNELRTALMPVNKGYPFVDVLTAAESYSKASGRQITYEYILLKGKNDSPQDAELLSNYLRYKQASVNLIPANPVPEQGFERPSKAAVERFLRILQKNRINATVRKEMGK
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SSQVGCDMHCAFCASGLKGAVRNLTAAEIVAQVYLFNERLREQGAMVSRVVVMGSGEPMLNFDSVLQALDFLHREDTCNMSYRNMTLSTCGIIPGIKRLEEQGKPINLAISLHAVKNELRTALMPVNKGYPFVDVLTAAESYSKASGRQITYEYILLKGKNDS
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: DIFALPIEELQELFVAAGLKKFRAKQVFQWLYQKSVFDFAAMHNLSKADIAVLQEKFTVLPRSLKILREQNSSDGMTSKLLLGLPDGNSVETVLMHHDYGYSVCVSSQVGCDMHCAFCASGLKGAVRNLTAAEIVAQVYLFNERLREQGAMVSRVVVMGSGEPMLNFDSVLQALDFLHREDTCNMSYRNMTLSTCGIIPGIKRLEEQGKPINLAISLHAVKNELRTALMPVNKGYPFVDVLTAAESYSKASGRQITYEYILLKGKNDSPQDAELLSNYLRYKQASVNLIPANPVPEQGFERPSKAAVERFLRILQKNRINATVRKEMGKDIDAACGQLRAKFAKEQE
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MAIKKYKPTTNGRRHMTSSDFAEITTSTPEKSLLRPLKKKAGRNNQGKLTVRHHGGGHKRQYRVIDFKRNKDGIPGRVATIEYDPNRSANIALINYADGEKRYIIAAKGLEVGQTIYSGAEADIKIGNALELKDIPVGTVVHNIEMKPGKGGQLVRSAGTSAQVLGKEGKYVLIRLNSGEVRMILATCRATIGQVGNEQHELINIGKAGRSRWMGKRPTVRGSVMNPNDHPHGGGEGKAPIGRKSPMSPWGKPTLGYKTRKKNNNSDKFIVRRRKKK

Annotated regions:
phrase: IKIGNALELKDIPVGTVVHNIEMKPGKGGQLVRSAGTSAQVLGKEGKYVLIRLNSGEVRMILATCRATIGQVGNEQHELINIGKAGRSRWMGKRPTVRGSVMNPNDHPHGGGEGKAPIGRKSPMSPWGK
type: DOMAIN
name: Ribosomal_uL2_C
description: Large ribosomal subunit protein uL2, C-terminal

phrase: PTVRGSVMNPN
type: CONSERVED_SITE
name: Ribosomal_uL2_CS
description: Large ribosomal subunit protein uL2, conserved site

phrase: GRNNQGKLTVRHHGGGHKRQYRVIDFKRNKDGIPGRVATIEYDPNRSANIALINYADGEKRYIIAAKGLEVGQTIY
type: DOMAIN
name: Ribosomal_uL2_RNA-bd_dom
description: Large ribosomal subunit protein uL2, RNA-binding domain

phrase: KIGNALELKDIPVGTVVHNIEMKPGKGGQLVRSAGTSAQVLGKEGKYVLIRLNSGEVRMILATCRATIGQVGNEQHELINIGKAGRSRWMGKRPTVRGSVMNPNDHPHGGGEGKAPIGRKSPMSPW
type: DOMAIN
name: Ribosomal_uL2_C
description: Large ribosomal subunit protein uL2, C-terminal