nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSKSYAVAILGATGAVGTELLELLESRNFPVSHLKLLASQRSVGRTLRFKGEDLPIESVSDRAFENVDLVLASAGGSISKAWAAKAVEKGAVVIDNSSAFRMHPEVPLIVPEVNPQAAATHKGIIANPNCTTILLAVAVWPLHQVKPVQRIVAATYQSASGAGAKAMAEVKTQASAILQGQPPVAEVLPYPLAFNLFPHNSPLNDVGYCEEEMKMVNETRKIFGTQQIRITATCVRVPVLRAHSEAINIEFQTPFSPDEAREILSSAPGVKLVEDWRANYFPMPIEATGRDEVLVGRIRQDISHPCGLELWLCGDQIRKGAALNAVQIAELLVEKNLLKPSTAYVSS

Annotated regions:
phrase: VAILGATGAVGTELLELLESRNFPVSHLKLLASQRSVGRTLRFKGEDLPIESVSDRAFENVDLVLASAGGSISKAWAAKAVEKGAVVIDNSSAFRMHPEVPLIVPEVNPQAA
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: AVAILGATGAVGTELLELLESRNFPVSHLKLLASQRSVGRTLRFKGEDLPIESVSDRAFENVDLVLASAGGSISKAWAAKAVEKGAVVIDNSSAFRMHPEVPLIVPEVNPQAAAT
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: PLHQVKPVQRIVAATYQSASGAGAKAMAEVKTQASAILQGQPPVAEVLPYPLAFNLFPHNSPLNDVGYCEEEMKMVNETRKIFGTQQIRITATCVRVPVLRAHSEAINIEFQTPFSPDEAREILSSAPGVKLVEDWRANYFPMPIEATGRDEVLVGRIRQDISHPCGLELWLCGDQIR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain
Protein sequence:
MRVRETLRNYQQWWIWGVLGFWMLMICNVGGNLWVTVYYGVPVWKEAKTTLFCASDAKAYDTEVHNIWATHACVPTDPNPQEIVLVNVTENFNMWKNDMVDQMHEDVISLWDQSLKPCVKLTPLCVTLECRNVSSNNRTFQDDSVKEEMKNCSFNVTTLLRDKKEKKEALFYRLDIVPLNGKNSSKNSSEYYRLINCNTTAMTQACPKVTFDPIPIHYCTPAGYAILKCNEKNFTGIGKCSNVSTVQCTHGIKPVVSTQLLLNGSLAEEEIIISSXNLTDNGKIIIVRLNQSVEIVCTRPNNNTRKGIRIGPGQTFYATGDIIGDIRLAHCNISKDDWNKTLQKVSKKLAEHFPNKRINFTSSSGGDLEIVTHSFNCRGEFFYCNTSGLFNFTYMPNSTDMPLNDTTNNSRSVITLPCRIKQVINMWQEVGRAMYAPPIEGNITCKSNITGLLLFRDGGKGENTTEIFRPGGGDMKDNWRSELYYYKVVEIKPLYCIAPTTAERRKVVEREKRAVGLGAVFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLKAIEAQQHLLQLTVWGIKQLQTRVLAIERYLQDQQLLGIWGCSGKLICTTAVPWNSSWSNKSQEEIWENMTWMQWDKEISNYTYTIYRLLEDSQSQQERNEKDLLALDSWNTLWSWFNITNWLWYIRIFIMIVGGLIGLRIVFAVLSVVNRVRQGYSPLSFQTLTPNPGGPGRLGGIEEEGGEQGKTRSIRLVHGFLALAWDDLRNLCLF

Annotated regions:
phrase: VQARQLLSGIVQQQSNLLKAIEAQQHLLQLTVWGIKQLQTRVLAIERYLQDQQLLGIWGCSGKLICTTAVPWNSSWSNKSQEEIWENMTWMQWDKEISNYTYTIYRLLEDSQSQQERNEKDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: KEEMKNCSFNVTTLLRDKKEKKEALFYRLDIVPLNGKNSSKNSSEYYRLINCNTTAMTQACPKVTFDPIPIHYCTPAGYAILKCNEKNFTGIGKCSNVSTVQCTHGIKPVVSTQLLLNGSLAEEEIIISSXNLTDNGKIIIVRLNQSVEIVCTRPNNNTRKGIRIGPGQTFYATGDIIGDIRLAHCNISKDDWNKTLQKVSKKLAEHFPNKRINFTSSSGGDLEIVTHSFNCRGEFFYCNTSGLFNFTYMPNSTDMPLNDTTNNSRSVITLPCRIKQVINMWQEVGRAMYAPPIEGNITCKSNITGLLLFRDGGKGENTTEIFRPGGGDMKDNWRSELYYYKVVEIKPLYCIAPTTAERRKVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: LWVTVYYGVPVWKEAKTTLFCASDAKAYDTEVHNIWATHACVPTDPNPQEIVLVNVTENFNMWKNDMVDQMHEDVISLWDQSLKPCVKLTPLCVTLECRNVSSNNR
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: MGAASITLTVQARQLLSGIVQQQSNLLKAIEAQQHLLQLTVWGIKQLQTRVLAIERYLQDQQLLGIWGCSGKLICTTAVPWNSSWSNKSQEEIWENMTWMQWDKEISNYTYTIYRLLEDSQSQQERNEKDLLALDSWNTLWSWFNITNWLWYIRIFIMIVGGLIGLRIVFAVLSVVNRVRQGYSPLSFQT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MKIKKINNQKVQYFFKVSSKELETQLSSAYEKIKSKVEIKGFRKGHVPRKIFENHFGKNNLYSDALENIVQTKYQEILQKKDFESMGMPQVIDLNEKKLKDNQNFTFGLEFIVKPKVILKKYLGLEITKDELEVKDCEVEEKINSLLEKQATLESKTQNNSLELTDTAVFDFEGFVDEKPFEGGTAKNFSLKIGSGQFLPGFEDQMLGMKQGQNKDINITFPSDYHQKKLANKKVIFKVTLHQIKTKKIPQLTDNLVKLLKLANVSTVEELKNNTKKTLLDQKKHKEKENIKKQVIEQLVKNSELQIPQEIISQEKTHLQKEFEKQLKQQNLTLEQYKQYLGIGDEKMEKEFNQQAQKNLQYRLIIEQVAFQEKLTISKEKIEQQYKNLSNHYKVPVNQIKQNLPEKNLQHSLLMDEALDLVINKAVVVTK

Annotated regions:
phrase: TDTAVFDFEGFVDEKPFEGGTAKNFSLKIGSGQFLPGFEDQMLGMKQGQNKDINITFPSDYHQKKLANKKVIFKVTLHQI
type: DOMAIN
name: PPIase_FKBP_dom
description: FKBP-type peptidyl-prolyl cis-trans isomerase domain

phrase: KIKKINNQKVQYFFKVSSKELETQLSSAYEKIKSKVEIKGFRKGHVPRKIFENHFGKNNLYSDALENIVQTKYQEILQKKDFESMGMPQVIDLNEKKLKDNQNFTFGLEFIVKPKVILKKYLGLEITKDELEVKDCEVEEKINS
type: DOMAIN
name: Trigger_fac_ribosome-bd_bac
description: Trigger factor, ribosome-binding, bacterial

phrase: ELTDTAVFDFEGFVDEKPFEGGTAKNFSLKIGSGQFLPGFEDQMLGMKQGQNKDINITFPSDYHQKKLANKKVIFKVTL
type: DOMAIN
name: PPIase_FKBP_dom
description: FKBP-type peptidyl-prolyl cis-trans isomerase domain

phrase: TVEELKNNTKKTLLDQKKHKEKENIKKQVIEQLVKNSELQIPQEIISQEKTHLQKEFEKQLKQQNLTLEQYKQYLGIGDEKMEKEFNQQAQKNLQYRLIIEQVAFQEKLTISKEKIEQQYKNLSNHYKVPVNQIKQNLPEKNLQHSLLMDEALDLV
type: DOMAIN
name: Trigger_fac_C
description: Trigger factor, C-terminal
Protein sequence:
MSDQQNTTPENTGYGADSIKMLKGLEAVRKRPGMYIGDTSDGTGLHHMVFEVVDNAIDEALAGHCDDIVVTIHTDNSISVTDNGRGIPTDIHKDDEFGRSAAEIVMTELHAGGKFDQNSYKVSGGLHGVGVSCVNALSEWLRLTIRRNGQVHQMEFRQGQRVAPLTATGPTDKRGTEVRFLADPAIFTNIEYHYEILSKRLRELSFLNNGVKVRLVDQRQGKEENFAFSGGVKGFVEYINRSKSVLHPNVFAVSAESSAGGVLVGVEVAMQWNDSYSESVLCFTNNIPQRDGGTHLTGLRAAMTRVLNKYIADNELAKKAKVETTGDDMREGLACVLSVKVPEPKFSSQTKDKLVSSEVRPAVEDAVARTLETWLLEHPNDAKALCGKIVEAARAREAARKAREMTRRKSVLEGAGLPGKLADCQEKDPALCELYIVEGDSAGGSAKQGRDRKFQAILPLRGKVLNVEKARFDRLIASEQIATLITALGTSIGPDFNIDKLRYHRLIIMTDADVDGAHIRTLLLTLLYRQMPELVARGHVYIAQPPLYKVKVGRDERYLKDDQEEAQFMLQLALKDAELIPSQGAAPIRGEALNELARQYVLADAVISRLSRVFDVAALSALAEGVEIDLEDAERTKASAQRLSDALHAASPANGVEVVAEYDDVAEKHRLAVRRMHHGNVRVSVLDADFVRDADYAVLAKSAKTFLGLVGAGAIVARGEGDKRKEQFVSDFREAMQWLRGEAERGLSKQRYKGLGEMNPEQLWETTM

Annotated regions:
phrase: AELIPSQGAAPIRGEALNELARQYVLADAVISRLSRVFDVAALSALAEGVEIDLEDAERTKASAQRLSDALHAASPANGVEVVAEYDDVAEKHRLAVRRMHHGNVRVSVLDADFVRDADYAVLAKSAKTFLGLVGAGAIVARGEGDKRKEQFVSDFREAMQWLRGE
type: DOMAIN
name: GyrB_insert
description: DNA gyrase subunit B insert domain

phrase: PLYKVKVGRDERYLKDDQEEAQFMLQLA
type: DOMAIN
name: GyrB_hook
description: DNA gyrase subunit B, hook

phrase: ELYIVEGDSAGGSAKQGRDRKFQAILPLRGKVLNVEKARFDRLIASEQIATLITALGTSIGPDFNIDKLRYHRLIIMTDADVDGAHIRTLLLTLLYRQMPELVARGHVYIA
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: DGTGLHHMVFEVVDNAIDEALAGHCDDIVVTIHTDNSISVTDNGRGIPTDIHKDDEFGRSAAEIVMTELHAGGKFDQNSYKVSGGLHGVGVSCVNALSEWLRLTIRRNGQVHQMEFRQGQRVAPLTATGPTDKRGTEVR
type: DOMAIN
name: HATPase_dom
description: Histidine kinase/HSP90-like ATPase domain

phrase: CELYIVEGDSAGGSAKQGRDRKFQAILPLRGKVLNVEKARFDRLIASEQIATLITALGTSIGPDFNIDKLRYHRLIIMTDADVDGAHIRTLLLTLLYRQMPELVARGHVYIAQ
type: DOMAIN
name: TOPRIM_GyrB
description: DNA gyrase subunit B, TOPRIM domain

phrase: CELYIVEGDSAGGSAKQGRDRKFQAILPLRGKVLNVEKARFDRLIASEQIATLITALGTSIGPDFNIDKLRYHRLIIMTDADVDGAHIRTLLLTLLYRQMPELVARGHVYIAQP
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: GVKGFVEYINRSKSVLHPNVFAVSAESSAGGVLVGVEVAMQWNDSYSESVLCFTNNIPQRDGGTHLTGLRAAMTRVLNKYIADNELAKKAKVETTGDDMREGLACVLSVKVPEPKFSSQTKDKLVSSEVRPAVEDAVARTLETWLLEHPNDAKALCGKIVEAARAREAARKAR
type: DOMAIN
name: Topo_IIA_bsu_dom2
description: DNA topoisomerase, type IIA, subunit B, domain 2

phrase: SDGTGLHHMVFEVVDNAIDEALAGHCDDIVVTIHTDNSISVTDNGRGIPTDIHKDDEFGRSAAEIVMTELHAGGKFDQNSYKVSGGLHGVGVSCVNALSEWLRLTIRRNGQVHQMEFRQGQRVAPLTATGPTDKRGTEVRFLADPA
type: DOMAIN
name: HATPase_dom
description: Histidine kinase/HSP90-like ATPase domain

phrase: IVEGDSAG
type: CONSERVED_SITE
name: TopoIIA_CS
description: DNA topoisomerase, type IIA, conserved site

phrase: LSKQRYKGLGEMNPEQLWETT
type: DOMAIN
name: DNA_gyrase_B_C
description: DNA gyrase B subunit, C-terminal
Protein sequence:
MAPTARTPTARTRDDRRATTRTARLRTRIPEPDEEPDLLGQYLTQIGATPLLTAEDEVRLATRIEAGVRAREELETADTGEPAPTPRRRRTLEETVHDGQEAKDHMVRANLRLVVSMAKRHAHRGLPLLDVIQEGNLGLIRAVEKFDHTKGFKFSTYATWWIRQAIERGLATHARTVRLPVHVVEQLQKLAKVERKLRAGLDREPTTEEVAAESGIDVDKVVWLRRVGRDAVSLDTPVDETGDTVVGDLIPDTEVLRAPEVAEFQALAAELREAVGTLAPRESLILSLRYGLHDGRPRTLQQVAQHVGLTRERVRQLEKESLAHLRAPENRERLLDWAS

Annotated regions:
phrase: DVIQEGNLGLIRA
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: FSTYATWW
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: LAPRESLILSLR
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: TLQQVAQHVGLTRER
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: VRQLEKESLAH
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: GTLAPRESLILSLRYGLHDGRPRTLQQVAQHVGLTRERVRQLEKESLAHLR
type: DOMAIN
name: RNA_pol_sigma70_r4
description: RNA polymerase sigma-70 region 4

phrase: DLLGQYLTQIGATPLLTAEDEVRLATRIEAGV
type: DOMAIN
name: RNA_pol_sigma70_r1_2
description: RNA polymerase sigma-70 region 1.2

phrase: TLQQVAQHVGLTRERVRQLEKESLAH
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: DVIQEGNLGLIRA
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: EQLQKLAKVERKLRAGLDREPTTEEVAAESGIDVDKVVWLRRVGRDAVSLDTPVDETGDTVVGDLIPDTEVLRA
type: DOMAIN
name: RNA_pol_sigma70_r3
description: RNA polymerase sigma-70 region 3

phrase: EAKDHMVRANLRLVVSMAKRHAHRGLPLLDVIQEGNLGLIRAVEKFDHTKGFKFSTYATWWIRQAIERGLATHARTVRLPVHVVEQLQKLAKVERKLRAGLDREPTTEEVAAESGIDVDKVVWLRRVGRDAVSLDTPVDETGDTVVGDLIPDTEVLRAPEVAEFQALAAELREAVGTLAPRESLILSLRYGLHDGRPRTLQQVAQHVGLTRERVRQLEKESLAHL
type: DOMAIN
name: RNA_pol_sigma-70_dom
description: RNA polymerase sigma-70-like domain

phrase: MVRANLRLVVSMAKRHAHRGLPLLDVIQEGNLGLIRAVEKFDHTKGFKFSTYATWWIRQAIERGLATHA
type: DOMAIN
name: RNA_pol_sigma70_r2
description: RNA polymerase sigma-70 region 2
Protein sequence:
MRVRGTQRNYPLLWRWGIMIVLLMMICNAKKLWVTVYYGVPVWKDADTTLFCASDAKAYDTEAHNVWATHACVPTDPSPQEIHLENVTENFNMWKNNMVEQMHKDIISLWDQSLKPCVKLTPLCVTLDCQDVKVTDNVTDMRGEIKNCSFNMTTELRDKKQKVQSFFYRLDVVPISETKGKGDSSMYRLINCNTSAITQACPKVSFEPIPIHFCAPAGFAILKCNKKNFNGTGPCTNVSTVQCTHGIKPVVSTQLLLNGSLAEGEVVIRSENITDNAKTIIVQLNETVKINCTRPNNNTRKGVHIGPGQAFYTSKIIGNIRQAHCNVSETDWNNMLQKVVKQLSKYFNPNHTISFNASSGGDLEITTHSLNCGGEFFYCNTSKLFNSTWYNNGTNWYTNGTNETISNGTITLPCRIKQIINMWQRVGQAMYAPPIEGIIRCESNITGLLLTRDGGTNSTSETFRPGGGDMRDNWRSELYKYKVVQIEPLGVAPTHAKRRVVEREKRAVGLGAVFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQQLLKLTVWGIKQLQARVLALERYLKDQQLLGIWGCSGKLICTTNVPWNTSWSNKTYKDIWENMTWLQWDREISNYTDIIYNLIEESQNQQEKNEQDLLALDKWASLWNWFDISNWLWYIKIFIMIVGGLIGLRIVFAVLSVINRVRQGYSPLSFQTLTHHQREPDRPEGIEEGGGEQDRNKSVRLVSGFLALAWDDLRSLCLFSYHRLRD

Annotated regions:
phrase: VQARQLLSGIVQQQSNLLRAIEAQQQLLKLTVWGIKQLQARVLALERYLKDQQLLGIWGCSGKLICTTNVPWNTSWSNKTYKDIWENMTWLQWDREISNYTDIIYNLIEESQNQQEKNEQDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKDADTTLFCASDAKAYDTEAHNVWATHACVPTDPSPQEIHLENVTENFNMWKNNMVEQMHKDIISLWDQSLKPCVKLTPLCVTLDCQDVKVTDN
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: GEIKNCSFNMTTELRDKKQKVQSFFYRLDVVPISETKGKGDSSMYRLINCNTSAITQACPKVSFEPIPIHFCAPAGFAILKCNKKNFNGTGPCTNVSTVQCTHGIKPVVSTQLLLNGSLAEGEVVIRSENITDNAKTIIVQLNETVKINCTRPNNNTRKGVHIGPGQAFYTSKIIGNIRQAHCNVSETDWNNMLQKVVKQLSKYFNPNHTISFNASSGGDLEITTHSLNCGGEFFYCNTSKLFNSTWYNNGTNWYTNGTNETISNGTITLPCRIKQIINMWQRVGQAMYAPPIEGIIRCESNITGLLLTRDGGTNSTSETFRPGGGDMRDNWRSELYKYKVVQIEPLGVAPTHAKRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: MGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQQLLKLTVWGIKQLQARVLALERYLKDQQLLGIWGCSGKLICTTNVPWNTSWSNKTYKDIWENMTWLQWDREISNYTDIIYNLIEESQNQQEKNEQDLLALDKWASLWNWFDISNWLWYIKIFIMIVGGLIGLRIVFAVLSVINRVRQGYSPLSFQTL
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MIAAPDRTPLTREFFARPVLDVAPDLLGRVLVRTTPDGPIELRVTEVEAYDGPSDPGSHAYRGRTARNGVMFGPPGHVYVYFTYGMWHCMNLVCGPEGRASAVLLRAGEIIEGAELARTRRLSARNDKELAKGPARLATALEVDRALDGTDACAPEGGPLTLLSGTPVPPDQVRNGPRTGVSGDGGVHPWRFWIDNDPTVSPYRAHTPRRRRT

Annotated regions:
Protein sequence:
MIAGKRILLIIGGGIAAFKALDLIRRLRDRGASVVPVLTRAGAQFVTPLTVSALAGHKVHQDLFDLTEEAEMGHIQLSRAADLVVVVPATADLMAKMAGGHADDLASTLLLATDKPVMIAPAMNVRMWEHPATRRNLATLVADGVRVLGPDAGPMACGEFGPGRMVEPSDILAGIEAALAAGPLAGRRVLVTSGPTHEPIDPVRYIANRSSGAQGTALAAALRDLGAQVIFVTGPASVPPPSGVQVIKVETARQMLEAVEAALPADAAVMAAAVADWRVANAAGSKMKKDGTGRAPGLEFAENPDILATVSRHPSARPGLVVGFAAETDEVIAHATAKRLRKGCDWIVANDVRPDTGIMGGSSNAVTIISADGQESWPMMGKDEVARRLADRIAGALDGA

Annotated regions:
phrase: KRILLIIGGGIAAFKALDLIRRLRDRGASVVPVLTRAGAQFVTPLTVSALAGHKVHQDLFDLTEEAEMGHIQLSRAADLVVVVPATADLMAKMAGGHADDLASTLLLATDKPVMIAPAMNVRMWEHPATRRNLATLVADGVRVLGPDAGPMACGEFGPGRMVEPSDILAG
type: DOMAIN
name: Flavoprotein
description: Flavoprotein

phrase: LAGRRVLVTSGPTHEPIDPVRYIANRSSGAQGTALAAALRDLGAQVIFVTGPASVPPPSGVQVIKVETARQMLEAVEAALPADAAVMAAAVADWRVANAAGSKMKKDGTGRAPGLEFAENPDILATVSRHPSARPGLVVGFAAETDEVIAHATAKRLRKGCDWIVANDVRPDTGIMGGSSNAVTI
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal
Protein sequence:
MDTEPDPNNATVDFGFQKVAPAEKTERVGEVFSTVARRYDLMNDLMSFGTHRIMKRMVIHMSGVRAGHRVLDLAGGTGDMAALFGPVVGHDGAVIMTDLNAEMLAVGRDRLLDKGMTQIQYCRAPAESLPFTDDAFDVACISFGIRNFTDKDTALRELHRVIRPGGTLIVLEFSQPKSPLLGSAYKAFQALWPTAGRALVGAAQPYEYLVESIRVHPSQEALQQMFEDAGFRDVYFENLVGGIAAIHRGSVL

Annotated regions:
phrase: RVIRPGGTLIVLEF
type: CONSERVED_SITE
name: UbiE/COQ5_MeTrFase_CS
description: UbiE/COQ5 methyltransferase, conserved site
Protein sequence:
MMELSRTPAVMRLLEYAREKKAITHDEVENILAHYGVETEELLHDVLDMLEQENIKVFSSEEEELEDEVFAGLKGPAADDGDGSFPLSTERVRDKLCDSSRGARQNLLSNARNIALDDPVKLYLRDIGQEKLLTAEQEVMLSKRMEEGEGIIKDIITQSGLLLPEFYHIGRSLSKKALAVLDPAESGRTRKEISEEMADRRRLKQAYGEVLRSLYPEMRHYMAMKKRLDERGEPVTVLSSDEEVCKQRDKLLSCLQKVDLQLEEIDRFSRKFLDTARKIREYKRRKDRHEKQLMIADLCDMRKIGRGLAVPRQRAKLEETLGMSADCIQEIYTQIQKVTRRLRRIEYDFENTIDGILSMARAIHRGHVMLKKAKDKLINANLRLVVSIAKKYTNRGLLFFDLVQEGNIGLIKAVEKFEYRKGYKFSTYATWWIRQAITRSISDQARTIRVPVHMIEQINKVTRESRQLLQKFGREPSDEEIAQQLCWTVEKVKQVKSVAREPISLETPIGEEEDSSLGDFVPDADVENPSRVTERVLLKEEVRSILSALPAREHEVLRMRFGLDGDYSQTLEEVGLYFDVTRERIRQIEAKALKRLRHPRHSRRLKDFLDS

Annotated regions:
phrase: LSALPAREHEVLRMRFGLDGDYSQTLEEVGLYFDVTRERIRQIEAKALKRLR
type: DOMAIN
name: RNA_pol_sigma70_r4
description: RNA polymerase sigma-70 region 4

phrase: LINANLRLVVSIAKKYTNRGLLFFDLVQEGNIGLIKAVEKFEYRKGYKFSTYATWWIRQAITRSISDQAR
type: DOMAIN
name: RNA_pol_sigma70_r2
description: RNA polymerase sigma-70 region 2

phrase: TLEEVGLYFDVTRERIRQIEAKALKR
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: DPVKLYLRDIGQEKLLTAEQEVMLSKRMEE
type: DOMAIN
name: RNA_pol_sigma70_r1_2
description: RNA polymerase sigma-70 region 1.2

phrase: PAVMRLLEYAREKKAITHDEVENILAHYGVETEELLHDVLDMLEQENIKVFSSEEEEL
type: DOMAIN
name: RNA_pol_sigma_70_r1_1
description: RNA polymerase sigma factor 70, region 1.1

phrase: AKDKLINANLRLVVSIAKKYTNRGLLFFDLVQEGNIGLIKAVEKFEYRKGYKFSTYATWWIRQAITRSISDQARTIRVPVHMIEQINKVTRESRQLLQKFGREPSDEEIAQQLCWTVEKVKQVKSVAREPISLETPIGEEEDSSLGDFVPDADVENPSRVTERVLLKEEVRSILSALPAREHEVLRMRFGLDGDYSQTLEEVGLYFDVTRERIRQIEAKALKRLR
type: DOMAIN
name: RNA_pol_sigma-70_dom
description: RNA polymerase sigma-70-like domain

phrase: DLVQEGNIGLIKA
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: FSTYATWW
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: LPAREHEVLRMR
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: TLEEVGLYFDVTRER
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: IRQIEAKALKR
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: DLVQEGNIGLIKA
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: AKDKLINANLRLVVSIAKKYTNRGLLFFDLVQEGNIGLIKAVEKFEYRKGYKFSTYATWWIRQAITRSISDQARTIRVPVHMIEQINKVTRESRQLLQKFGREPSDEEIAQQLCWTVEKVKQVKSVAREPISLETPIGEEEDSSLGDFVPDADVENPSRVTERVLLKEEVRSILSALPAREHEVLRMRFGLDGDYSQTLEEVGLYFDVTRERIRQIEAKALKRLRHPRHSRRLKDF
type: DOMAIN
name: RNA_pol_sigma_RpoD_C
description: RNA polymerase sigma factor RpoD, C-terminal

phrase: EQINKVTRESRQLLQKFGREPSDEEIAQQLCWTVEKVKQVKSVAREPISLETPIGEEEDSSLGDFVPDADVENP
type: DOMAIN
name: RNA_pol_sigma70_r3
description: RNA polymerase sigma-70 region 3
Protein sequence:
MPQPQQLPGPNADIWDWQMRGLCRGVDSSMFFHPDGERGRARAQREMRAKEMCRSCPVIAQCRSHALAVGEPYGIWGGLSESERELLLKRGIRRSA

Annotated regions:
phrase: WQMRGLCRGVDSSMFFHPDGERGRARAQREMRAKEMCRSCPVIAQCRSHALAVGEPYGIWGGLSESERE
type: DOMAIN
name: 4FE4S_WBL
description: WhiB-like iron-sulfur binding domain

phrase: LCRGVDSSMFFHPDGERGRARAQREMRAKEMCRSCPVIAQCRSHALAVGEPYGIWGGLSESERE
type: DOMAIN
name: 4FE4S_WBL
description: WhiB-like iron-sulfur binding domain
Protein sequence:
MEKNVKVHCLTNPVTMQSVANVLLAAGGSAVMAQDEQEVEEVTAICQATLLNTGVPDERKIRSCILAGKCANRLGHPVVLDPVGAGASKFRRKKIGQLLQSVVPSIIRCNQEEASALLRAEDEKEFLVLGTERQKIEGTAESCQQDGDAVFSGIQSGGVESSLELELEKARRLAVRLAKKYRCTVCMTGEQDVISDGERVKVISGGDGRICRITGSGCMLSALCALKCGDGTDSFEAAAEAAETWRHCAERAGETVDEKEEGIGSFQIRLLDALSLKMEMERGRRMEVQSRMKQNKKRYISPEQLRLYAVTDRKWLAEGETLETVVETLVRSGVTCVQLREKHASDEEIISEGKKLNEICRKHHVPLIVNDRPDLAKKIGAAGVHVGLSDMGIEKARELLGEDFIIGGSAHNVKEALQAQKAGADYIGCGAVFGSQTKSDVTTLAKEELCAICEAVEIPVVAIGGITAENIKELTGTGIDGVAVVSGLFAAKDKPEMVRRFLKAFEMKKVLTIAGSDCSGGAGIQADLKTMAANGVYGMSAVMALTAQNTTGVQGIMEVTPEFAGQQIDSIFTDIRPDAVKIGMLSSGEIIHVVAEKLKEYQAEHIVLDPVMVSTSGHRLIQKDAEQSLKKELFPLAELITPNIPEAEVLSGRKIKNAQDMESAAEKIVEEYGCAVLLKGGHRINDANDFLCTWEKKVWICGERVENPNTHGTGCTLSSAIASNLAKGAGMEEAVQKAKEYLTEALKEQLDLGAGSGPMDHTLGKIIF

Annotated regions:
phrase: LYAVTDRKWLAEGETLETVVETLVRSGVTCVQLREKHASDEEIISEGKKLNEICRKHHVPLIVNDRPDLAKKIGAAGVHVGLSDMGIEKARELLGEDFIIGGSAHNVKEALQAQKAGADYIGCGAVFGSQTKSDVTTLAKEELCAICEAVEIPVVAIGGITAENIKELTGTGIDGVAVVSGLFAAKDKPEMVRRFL
type: DOMAIN
name: ThiamineP_synth_TenI
description: Thiamine phosphate synthase/TenI

phrase: LYAVTDRKWLAEGETLETVVETLVRSGVTCVQLREKHASDEEIISEGKKLNEICRKHHVPLIVNDRPDLAKKIGAAGVHVGLSDMGIEKARELLGEDFIIGGSAHNVKEALQAQKAGADYIGCGAVFGSQTKSDVTTLAKEELCAICEAVEIPVVAIGGITAENIKELTGTGIDGVAVVSG
type: DOMAIN
name: ThiamineP_synth_TenI
description: Thiamine phosphate synthase/TenI

phrase: KVLTIAGSDCSGGAGIQADLKTMAANGVYGMSAVMALTAQNTTGVQGIMEVTPEFAGQQIDSIFTDIRPDAVKIGMLSSGEIIHVVAEKLKEYQAEHIVLDPVMVSTSGHRLIQKDAEQSLKKELFPLAELITPNIPEAEVLSGRKIKNAQDMESAAEKIVEEYGCAVLLKGGHRINDANDFLCTWEKKVWICGERVENPNTHGTGCTLSSAIASNLAKGAGMEEAVQKAKEYLTEALK
type: DOMAIN
name: HMP/HMP-P_kinase_dom
description: Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase domain

phrase: VLTIAGSDCSGGAGIQADLKTMAANGVYGMSAVMALTAQNTTGVQGIMEVTPEFAGQQIDSIFTDIRPDAVKIGMLSSGEIIHVVAEKLKEYQAEHIVLDPVMVSTSGHRLIQKDAEQSLKKELFPLAELITPNIPEAEVLSGRKIKNAQDMESAAEKIVEEYGCAVLLKGGHRINDANDFLCTWEKKVWICGERVENPNTHGTGCTLSSAIASNLAKGAGMEEAVQKAKEYLTEALKEQLDLGAGSGPMD
type: DOMAIN
name: HMP/HMP-P_kinase_dom
description: Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase domain

phrase: DCSGGAGIQADLKTMAANGVYGMSAVMALTAQNTTGVQGIMEVTPEFAGQQIDSIFTDIRPDAVKIGMLSSGEIIHVVAEKLKEYQAEHIVLDPVMVSTSGHRLIQKDAEQSLKKELFPLAELITPNIPEAEVLSGRKIKNAQDMESAAEKIVEEYGCAVLLKGGHRINDANDFLCTWEKKVWICGERVENPNTHGTGCTLSSAIASNLAKGAGMEEAVQKAKEYLTEALKEQLDLGAGSGPM
type: DOMAIN
name: PM/HMP-P_kinase-1
description: Pyridoxamine kinase/Phosphomethylpyrimidine kinase
Protein sequence:
MSSSTVAVILVAAGSGTRLGRTEPKALVPLGDSTILGVALDAVLGMRETPHVVVVAPSDRVAEVRDRYARAAAAASAPLDVVPGADSRQGSVEAGLAVLPRIVDTVLVHDAARPLTPSLVFDEVAAAVRSRGHGIVPGLPVVDTIKRIAGGHIVETVDRSTLAAVQTPQGFPREDLDAAFAAADPTYEYTDDAAIAAAAGLTVDLVPGDARAFKITVPEDLRRAEQQLRDEREPAQVPDPTRPSEAAEVLESVPEPEPVGVPGPAALRIGTGVDVHAFDDDPATPLWLAGLEWPGERGLSGHSDGDAAVHAICDALLAAAGLGDVGAVFGTADPRFAAAHGEVFLAETRRLVEASGFRIVNATVQIVGNRPKLAPRRGEAEALLSALLGAPVSVAATTTDGLGFTGRGEGVSAIATALLTTA

Annotated regions:
phrase: VLVHDAA
type: CONSERVED_SITE
name: ISPD_synthase_CS
description: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site

phrase: LRIGTGVDVHAFDDDPATPLWLAGLEWPGERGLSGHSDGDAAVHAICDALLAAAGLGDVGAVFGTADPRFAAAHGEVFLAETRRLVEASGFRIVNATVQIVGNRPKLAPRRGEAEALLSALLGAPVSVAATTTDGLGFTGRGEGVSAIATALLT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RIGTGVDVHAFDDDPATPLWLAGLEWPGERGLSGHSDGDAAVHAICDALLAAAGLGDVGAVFGTADPRFAAAHGEVFLAETRRLVEASGFRIVNATVQIVGNRPKLAPRRGEAEALLSALLGAPVSVAATTTDGLGFTGRGEGVSAIATALL
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RIGTGVDVHAFDDDPATPLWLAGLEWPGERGLSGHSDGDAAVHAICDALLAAAGLGDVGAVFGTADPRFAAAHGEVFLAETRRLVEASGFRIVNATVQIVGNRPKLAPRRGEAEALLSALLGAPVSVAATTTDGLGFTGRGEGVSAIATAL
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: PSEAAEVLESVPEPEPVGVPGPAALRIGTGVDVHAFDDDPATPLWLAGLEWPGERGLSGHSDGDAAVHAICDALLAAAGLGDVGAVFGTADPRFAAAHGEVFLAETRRLVEASGFRIVNATVQIVGNRPKLAPRRGEAEALLSALLGAPVSVAATTTDGLGFTGRGEGVSAIATALL
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: LRIGTGVDVHAFDDDPATPLWLAGLEWPGERGLSGHSDGDAAVHAICDALLAAAGLGDVGAVFGTADPRFAAAHGEVFLAETRRLVEASGFRIVNATVQIVGNRPKLAPRRGEAEALLSALLGAPVSVAATTTDGLGFTGRGEGVSAIATAL
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: SDGDAAVHAICDALL
type: CONSERVED_SITE
name: MECDP_synthase_CS
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site
Protein sequence:
MSGTDMKILLVVGGGIAAYKACELVRLIRKGGGDVTCVVTEGGQQFVTPMALAALSENPVHTTLWDLKNEAEMGHIQLSREADLVVVCPATADLLAKMAAGIADDLATTLILATDKPVMAVPAMNVRMWEHQATQRNIEWLKQAGVEVLDPDQGAMACGEFGYGRLPEPEAIWAAIAGHFGIEVELPEAAPAKSAQVEEIEAVEPEVAPRGGGLGGLLSSIIPRSTPKRSAEEIEAEYLEEEELPEVEVDEADAAEEVEEPVAEDDVDPDAVPDLGGPLMAQKGAAKSAPPTDAEAINHEVSDNKDAPEPVPGDAPAEPIEVADVESSAEDALEGSEFKVAKGHKPLEGKHVLVTAGPTWEAIDPVRYIANRSSGKQGFTIAAAAAALGAKVTLVAGPVALKTPEGVDRIDVESAEDMNKAVRKAMPADAAVMVAAVADWRPKEYRAEKMKKRGSAPPALILEENPDILTNVAAGKDRPQLVVGFAAETENVLENAKQKRKRKACDWVVANDVSGDVMGGDRNKVTIVMSGEIEELDEMPKIDVAMALVERIAAELNGTSEDA

Annotated regions:
phrase: LEGKHVLVTAGPTWEAIDPVRYIANRSSGKQGFTIAAAAAALGAKVTLVAGPVALKTPEGVDRIDVESAEDMNKAVRKAMPADAAVMVAAVADWRPKEYRAEKMKKRGSAPPALILEENPDILTNVAAGKDRPQLVVGFAAETENVLENAKQKRKRKACDWVVANDVSGDVMGGDRNKVTI
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal

phrase: MKILLVVGGGIAAYKACELVRLIRKGGGDVTCVVTEGGQQFVTPMALAALSENPVHTTLWDLKNEAEMGHIQLSREADLVVVCPATADLLAKMAAGIADDLATTLILATDKPVMAVPAMNVRMWEHQATQRNIEWLKQAGVEVLDPDQGAMACGEFGYGRLPEPEAIWAAI
type: DOMAIN
name: Flavoprotein
description: Flavoprotein
Protein sequence:
MRVKGIPRNWQQWWIWSILGFWMVCNGVGNLWVTVYYGVPVWKEAKATLFCASDAKAYEKEVHNVWATHACVPTNPDPQEIFLKNVTEDFNMWKNNMVDQMHEDIISLWDESLKPCVKLTPLCVTLTCRNASMGNNTDTVAYNNSMGAEMKNCSFNATTDLKDKKKTAYALFHSLDIVPINESAKGNMEYKLISCNTSSIAQACPKISFDPIPIHYCAPAGYAILKCNNNTFNGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEEDIIIRSENLTDNAKTIIVHLNEPVNISCIRPGNNTRTSIRIGPGQAFFANDIIGDIRQAHCNISKVDWNNTLHRVAEKLREHFPNKTIKFKEHSGGDLEITHHSFNCGGEFFYCNTSGLFNMTVNATTESLANSTGGNVNGNIILQCRIKQIINMWQEVGRAMYAPPIAGNISCNSSITGLLLTRDGGKSNGADNNTEIFRPGGGNMRDNWRSELYKYKVVEVKPLGIAPEKAKRRVVAREKRAVGIGAVFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLKAIEAQQHLLQLTVWGIKQLQTRVLALERYLRDQQLLGMWGCSGKFICPTAVPWNSSWSNKSYTDIWGNMTWMEWEREIDNYTDTIYRLLEESQNQQEQNEKDLLALDSWNSLWNWFNITQWLWYIKIFIMVVGGLIGLRIIFAVLSVVNRVRQGYSPLSFQTLTPNPRELDRLGRIEEEGGEQDKSRSVRLVSGFLALAWDDLRSLCLFSYH

Annotated regions:
phrase: MGAASITLTVQARQLLSGIVQQQSNLLKAIEAQQHLLQLTVWGIKQLQTRVLALERYLRDQQLLGMWGCSGKFICPTAVPWNSSWSNKSYTDIWGNMTWMEWEREIDNYTDTIYRLLEESQNQQEQNEKDLLALDSWNSLWNWFNITQWLWYIKIFIMVVGGLIGLRIIFAVLSVVNRVRQGYSPLSFQTL
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: VQARQLLSGIVQQQSNLLKAIEAQQHLLQLTVWGIKQLQTRVLALERYLRDQQLLGMWGCSGKFICPTAVPWNSSWSNKSYTDIWGNMTWMEWEREIDNYTDTIYRLLEESQNQQEQNEKDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: AEMKNCSFNATTDLKDKKKTAYALFHSLDIVPINESAKGNMEYKLISCNTSSIAQACPKISFDPIPIHYCAPAGYAILKCNNNTFNGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEEDIIIRSENLTDNAKTIIVHLNEPVNISCIRPGNNTRTSIRIGPGQAFFANDIIGDIRQAHCNISKVDWNNTLHRVAEKLREHFPNKTIKFKEHSGGDLEITHHSFNCGGEFFYCNTSGLFNMTVNATTESLANSTGGNVNGNIILQCRIKQIINMWQEVGRAMYAPPIAGNISCNSSITGLLLTRDGGKSNGADNNTEIFRPGGGNMRDNWRSELYKYKVVEVKPLGIAPEKAKRRVVAREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: LWVTVYYGVPVWKEAKATLFCASDAKAYEKEVHNVWATHACVPTNPDPQEIFLKNVTEDFNMWKNNMVDQMHEDIISLWDESLKPCVKLTPLCVTLTCRNASMGNNTDT
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MKIITGGVTAAKGFEAASVEARIKYQNRKDMALVYSQVPCVAAGTFTTNVVKAAPVKWDQEVVYHSEAAQAVIINSGIANACTGAEGYGYCKQTAEAAAKALNVPESSVLVASTGVIGMQLPMDRIAAGVELLAKGKEDTEEAGLDAAKAIMTTDTKPKYVGVEIEIGGKTVTIGGMCKGSGMIHPNMCTMLGFVTTDAAITKELLQKALSDDVKDTYNMVSVDGDTSTNDTVLLLANGMAGNPVIDKEDSPEYTEFKKALNYVNTELAKKIAGDGEGATCLFEVKVIGAESKEQAVTLSQSVVMSTLTKAAIYGHDANWGRILCAMGYSGAQFDPEKVDLYFESKAGKLKIIENGVSTGYSEDEATKILSEDYVTAIADVKMGTATATAWGCDLTHEYVNINADYRS

Annotated regions:
Protein sequence:
MGGKWSKSSLVGWPTIRERMKRAEPAXDGVGKRDEPAAIGVGAVSRDLDKHGAVTSSNTAATNADCAWLEAQEEEEVGFPVRPQVPLRPMTYKGALDLSHFLREKGGLEGLIYSQRRQDILDLWIYHTQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPVEPEKVEKANEGENTSLLHPMSQHGMDDPEREVLEWRFDSRLAFHHMARELHPEYYKDC

Annotated regions: