nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MQTNLLKPKIISVEALTANQAKVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVAIAGVVHEYSTLDGVQEDVVNLLLNLKGIVFKLQSRDEVTINLRKEGPGVVTAKDIDLPHDVEIMNPDHVIAHLSAGGKLDMQIKVEKGRGYVPGNVRQYNDETTKIIGRIVLDASFSPVSRVSYAVESARVEQRTDLDRLVMTIETNGVLSPEEAIRQAASILVDQLVVFAALESSEVSGDLAPSRSSMVDPMLMRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEIKDVLAARGLSLGMKLESWPPANLEK

Annotated regions:
phrase: PMLMRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEIKDVL
type: DOMAIN
name: RNAP_asu_C
description: RNA polymerase, alpha subunit, C-terminal

phrase: EPFERGYGHTLGNALRRVLLSSMVGYAPTEVAIAGVVHEYSTLDGVQEDVVNLLLNLKGIVFKLQSRDEVTINLRKEGPGVVTAKDIDLPHDVEIMNPDHVIAHLSAGGKLDMQIKVEKGRGYVPGNVRQYNDETTKIIGRIVLDASFSPVSRVSYAVESARVEQRTDLDRLVMTIETNGVLSPEEAIRQAASILVDQ
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: VAIAGVVHEYSTLDGVQEDVVNLLLNLKGIVFKLQSRDEVTINLRKEGPGVVTAKDIDLPHDVEIMNPDHVIAHLSAGGKLDMQIKVEKGRGYVPGNVRQYNDETTKIIGRIVLDASF
type: DOMAIN
name: DNA-dir_RNA_pol_insert
description: DNA-directed RNA polymerase, insert domain

phrase: QAKVVMEPFERGYGHTLGNALRRVLLSSMVGYAPTEVAIAGVVHEYSTLDGVQEDVVNLLLNLKGIVFKLQSRDEVTINLRKEGPGVVTAKDIDLPHDVEIMNPDHVIAHLSAGGKLDMQIKVEKGRGYVPGNVRQYNDETTKIIGRIVLDASFSPVSRVSYAVESARVEQRTDLDRLVMTIETNGVLSPEEAIRQAASILVDQLVVFAA
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type
Protein sequence:
MASFVKFANTTFLDARFPLFKNVSFELARKQNWAIIGNTGSGRTTFLRCIQGSFTPSPSTSFSYPFLKGKSDSPWQAIQLLDFKSSGQQRAAYYSERYHSFRDKEHDTTLEKWLLGAYRGNEKFASQHVQEAASMTQLSHLLPSSLINLSNGQSRRAMLASKLVQRPQLLLLDEPYAGLDVTSRSVLSSLLGEMSNHCSPKIVLSLRPQDKIPDFITHVLELKNKKITYQGPKEQYIPMTSHSTNIPVKPQMKKSKPITIGKPLISMEHLNCVYWGRKVLSDINWTIREGERWALTGSNGSGKTTLLAYVVGDHPKLFASNIKFFGKSIGPGTGISIFDIQENIGHCSPEIHNHFPKQHTCFEALLSAWSTTFTIPKLTETRLAAISSILEEFELKDIKDKPLSSISVGMQRFILFCRAIVKQPRLVVLDEPFQGVDTKYVHMAHNYLNEKLSPSQAMVIISHYEDELPACVNRRAHIDNGKLVIHA

Annotated regions:
phrase: LSDINWTIREGERWALTGSNGSGKTTLLAYVVGDHPKLFASNIKFFGKSIGPGTGISIFDIQENIGHCSPEIHNHFPKQHTCFEALLSAWSTTFTIPKLTETRLAAISSILEEFELKDIKDKPLSSISVGMQRFILFCRAIVKQPRLVVLDEP
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: FKNVSFELARKQNWAIIGNTGSGRTTFLRCIQGSFTPSPSTSFSYPFLKGKSDSPWQAIQLLDFKSSGQQRAAYYSERYHSFRDKEHDTTLEKWLLGAYRGNEKFASQHVQEAASMTQLSHLLPSSLINLSNGQSRRAMLASKLVQRPQLLLLDEP
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: EGERWALTGSNGSGKTTLLAYVVGDHPKLFASNIKFFGKSIGPGTGISIFDIQENIGHCSPEIHNHFPKQHTCFEALLSAWSTTFTIPKLTETRLAAISSILEEFELKDIKDKPLSSISVGMQRFILFCRAIVKQPRLVVLDEPFQGVDTKYVHMAHNYLNEKLSPSQAMVIISHYEDELPACVNRRAHIDNG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: RKQNWAIIGNTGSGRTTFLRCIQGSFTPSPSTSFSYPFLKGKSDSPWQAIQLLDFKSSGQQRAAYYSERYHSFRDKEHDTTLEKWLLGAYRGNEKFASQHVQEAASMTQLSHLLPSSLINLSNGQSRRAMLASKLVQRPQLLLLDEPYAGLDVTSRSVLSSLLGEMSNHCSPKIVLSLRPQDKIPDFITHVLELKNK
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: ISMEHLNCVYWGRKVLSDINWTIREGERWALTGSNGSGKTTLLAYVVGDHPKLFASNIKFFGKSIGPGTGISIFDIQENIGHCSPEIHNHFPKQHTCFEALLSAWSTTFTIPKLTETRLAAISSILEEFELKDIKDKPLSSISVGMQRFILFCRAIVKQPRLVVLDEPFQGVDTKYVHMAHNYLNEKLSPSQAMVIISHYEDELPACVNRRAHIDNGKLVIH
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: VKFANTTFLDARFPLFKNVSFELARKQNWAIIGNTGSGRTTFLRCIQGSFTPSPSTSFSYPFLKGKSDSPWQAIQLLDFKSSGQQRAAYYSERYHSFRDKEHDTTLEKWLLGAYRGNEKFASQHVQEAASMTQLSHLLPSSLINLSNGQSRRAMLASKLVQRPQLLLLDEPYAGLDVTSRSVLSSLLGEMSNHCSPKIVLSLRPQDKIPDFITHVLELKNKKITYQGPKEQYIPMTSHSTNIPV
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain
Protein sequence:
MAYEASLIEKKWQKIWDENEYFEPKDDLNLPKKYILSMFPYPSGRIHMGHVRNYTIGDALARYYRKIGFNVLHPIGFDSFGMPAENAAIKHKIHPKSWTYENIAYMKKELFSLGFSFSKKRMLATSDPLYTKFEQEIFIKMFEKGLIYTKEANVNWCEQDQTVLANEQVEDGKCWRCGHEVVQKKMPGYYVKITAYAEKLLKDLEGLRDKWPNQVLTMQENWIGKSEGLAFSLNLDEKSKQKAKESSLEVFTTRADTIYGVSYVALAPEHKIVQNLLLQNLLNQDVLNKIKAIQNQSPRERQSSEKEGYFLGIYAIHPLSGEKIPLWVANFVLSDYGSGAVMAVPAHDERDFEFAKKYNLAIKQVIQTQENLPYTQKLGKLIHSQEFDNLDCNEARLKIISQFEAKNIGKRVVNFKIRDWGVSRQRYWGAPIPMIKCQSCGIAPQKLENLPITLPEDVQITGEGNPLDKHPTWKNCICPKCGKEAQKESDTLDTFFESSWYFARFASDEKTWQEKALDEKSVKYWMSVDQYIGGIEHAILHLLYARFFQKALRDLGYLTQNEPFDRLLTQGMVLKDGAKMSKSKGNVVDPDEIIEKYGADTARLFMLFAAPPAKELEWNDDAVEGAYRFICKLYDRAQNIKKGELVELKQENLNKEEKYARLKVYEALKKSEEVYHQSFAFNTLIAACMEALNALALCKNEALEQEAFYIILNILEPIIPHVCFELSEELFKCKNFKKLELKEEVFVKDTLNLAVSINGKKRAEFKISSSASKEEILAFAKENTAKWLEGKSIVKEIYVEGKLVNLVIK

Annotated regions:
phrase: PYPSGRIHMGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: KYARLKVYEALKKSEEVYHQSFAFNTLIAACMEALNALALCKNEALEQEAFYIILNILEPIIPHVCFELSEELFKCKNFKKLELKEEVFVKDTLNLAVSINGKKRAEFKISSSASKE
type: DOMAIN
name: M/V/L/I-tRNA-synth_anticd-bd
description: Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding

phrase: YILSMFPYPSGRIHMGHVRNYTIGDALARYYRKIGFNVLHPIGFDSFGMPAENAAIKHKIHPKSWTYENIAYMKKELFSLGFSFSKKRMLATSDPLYTKFEQEIFIKMFEKGLIYTKEANVNWCEQDQTVLANEQVEDGKCWRCGH
type: DOMAIN
name: Methionyl/Leucyl_tRNA_Synth
description: Methionyl/Leucyl tRNA synthetase

phrase: TWQEKALDEKSVKYWMSVDQYIGGIEHAILHLLYARFFQKALRDLGYLTQNEPFDRLLTQGMVLKDGAKMSKSKGNVVDPDEIIEKYGADTARLFMLFAAPPAKELEWNDD
type: DOMAIN
name: Methionyl/Leucyl_tRNA_Synth
description: Methionyl/Leucyl tRNA synthetase

phrase: ENWIGKSEGLAFSLNLDEKSKQKAKESSLEVFTTRADTIYGVSYVALAPEHKIVQNLLLQNLLNQDVLNKIKAIQNQSPRERQSSEKEGYFLGIYAIHPLSGEKIPLWVANFVLSDYGSGAVMAVPAHDERDFEFAKKYNLAIKQVIQTQENLPYTQKLGKLIHSQEFDNLDCNEARLKIISQ
type: DOMAIN
name: Leu_tRNA-synth_edit
description: Leucyl-tRNA synthetase, editing domain
Protein sequence:
MAKYIFVTGGVVSSLGKGIATSSIGLLLKNRGLDVVPLKFDPYINVDPGTMSPFQHGEVYVTDDGAETDLDLGHYERFIDCDLSQDNNLTAGQIYLSVIENERQGKYLGRTIQVVPHITSEIKKRVRKLADTRDVVITEIGGTVGDIESLPFLEAARQFALEEGKRNVLYIHLTLVPYIKASCEHKTKPTQHSVKALRDIGIQPDIIMCRAETSMLKEERDKISLFCNVRPEAVIEALDVDNIYEIPLIFHRQKLDQLIVRMLRLKAKRPKLSAWRHFVHTAAKPKAEIEIGVCGKYVAMHDAYKSVIEAVQHAATATGVKARIRWLEAEDITPETVKENLAGLAGIIVPGGFGIRGMEGKVEAIAYCREHKLPFLGLCVGLQVAIIEFARLVCGLKGANSTEFNPHTKYPVIYMLPQQRGVRKKGGTMRLGAYPCRIRKGSLASRCYGKTDISERHRHRYEVNNRFLNILKQHGMVASGLSPSGKLVEIVELRNHPFFLACQFHPEFKSRPLCPHPLFLGFIKAAIDFARHMPCAGSGPAH

Annotated regions:
phrase: KYIFVTGGVVSSLGKGIATSSIGLLLKNRGLDVVPLKFDPYINVDPGTMSPFQHGEVYVTDDGAETDLDLGHYERFIDCDLSQDNNLTAGQIYLSVIENERQGKYLGRTIQVVPHITSEIKKRVRKLADTRDVVITEIGGTVGDIESLPFLEAARQFALEEGKRNVLYIHLTLVPYIKASCEHKTKPTQHSVKALRDIGIQPDIIMCRAETSMLKEERDKISLFCNVRPEAVIEALDVDNIYEIPLIFHRQKLDQLIV
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: KYIFVTGGVVSSLGKGIATSSIGLLLKNRGLDVVPLKFDPYINVDPGTMSPFQHGEVYVTDDGAETDLDLGHYERFIDCDLSQDNNLTAGQIYLSVIENERQGKYLGRTIQVVPHITSEIKKRVRKLADTRDVVITEIGGTVGDIESLPFLEAARQFALEEGKRNVLYIHLTLVPYIKASCEHKTKPTQHSVKALRDIGIQPDIIMCRAETSMLKEERDKISLFCNVRPEAVIEALDVDNIYEIPLIFHRQKLDQLIVRMLR
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: IEIGVCGKYVAMHDAYKSVIEAVQHAATATGVKARIRWLEAEDITPETVKENLAGLAGIIVPGGFGIRGMEGKVEAIAYCREHKLPFLGLCVGLQVAIIEFARLVCGLKGANSTEFNPHTKYPVIYMLPQQRGVRKKGGTMRLGAYPCRIRKGSLASRCYGKTDISERHRHRYEVNNRFLNILKQHGMVASGLSPSGKLVEIVELRNHPFFLACQFHPEFKSRPLCPHPLFLGF
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain

phrase: MHDAYKSVIEAVQHAATATGVKARIRWLEAEDITPETVKENLAGLAGIIVPGGFGIRGMEGKVEAIAYCREHKLPFLGLCVGLQVAIIEFARLVCGLKGANSTEFNPHTKYPVIYMLPQQRGVRKKGGTMRLGAYPCRIRKGSLASRCYGKTDISERHRHRYEVNNRFLNILKQHGMVASGLSPSGKLVEIVELRNHPFFLACQFHPEFKSRPLCPHPLFLGFI
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase
Protein sequence:
MASLKMLICVCVAILIPSTLSQDSHGIAGIIDPRDTASMDVGKISFSEAIGSGAPKEPQIRNRIFACSSPTGASVARLAQPRHCHRHADSTNMTEGIAVVFKQNIAPYVFNVTLYYKHITTVTTWALFSRPQITNEYVTRVPIDYHEIVRIDRSGECSSKATYHKNFMFFEAYDNDEAEKKLPLVPSLLRSTVSKAFHTTNFTKRHQTLGYRTSTSVDCVVEYLQARSVYPYDYFGMATGDTVEISPFYTKNTTGPRRHSVYRDYRFLEIANYQVRDLETGQIRPPKKRNFLTDEQFTIGWDAMEEKESVCTLSKWIEVPEAVRVSYKNSYHFSLKDMTMTFSSGKQPFNISRLHLAECVPTIATEAIDGIFARKYSSTHVRSGDIEYYLGSGGFLIAFQKLMSHGLAEMYLEEAQRQNHLPRGRERRQAAGRRTASLQSGPQGDRITTHSSATFAMLQFAYDKIQAHVNELIGNLLEAWCELQNRQLIVWHEMKKLNPNSLMTSLFGQPVSARLLGDIVAVSKCIEIPIENIRMQDSMRMPGDPTMCYTRPVLIFRYSSSPESQFSANSTENHNLDILGQLGEHNEILQGRNLIEPCMINHRRYFLLGENYLLYEDYTFVRQVNASEIEEVSIFINLNATILEDLDFVPVEVYTREELRDTGTLNYDDVVRYQNIYNKRFRDIDTVIRGDRGDAIFRAIADFFGNTLGEVGKALGTVVMTAAAAVISTVSGIASFLSNPFAALGIGIAVVVSIILGLLAFKYVMNLKSNPVQVLFPGAVPPAGTPPRPSRRYYKDEEEVEEDSDEDDRILATRVLKGLELLHKDEQKARRQKARFSAFAKNMRNLFRRKPRTKEDDYPLLEYPSWAEESEDE

Annotated regions:
phrase: LSKWIEVPEAVRVSYKNSYHFSLKDMTMTFSSGKQPFNISRLHLAECVPTIATEAIDGIFARKYSSTHVRSGDIEYYLGSGGFLIAFQKLMSHGLAE
type: DOMAIN
name: Glycoprot_B_PH2
description: Herpesvirus Glycoprotein B, PH-like domain 2

phrase: ATFAMLQFAYDKIQAHVNELIGNLLEAWCELQNRQLIVWHEMKKLNPNSLMTSLFGQPVSARLLGDIVAVSKCIEIPIENIRMQDSMRMPGDPTMCYTRPVLIFRYSSSPESQFSANSTENHNLDILGQLGEHNEILQGRNLIEPCMINHRRYFLLGENYLLYEDYTFVRQVNASEIEEVSIFINLNATILEDLDFVPVEVYTREELRDTGTLNYDDVVRYQNIYNKRFRDID
type: DOMAIN
name: Glycoprotein_B_ecto_C
description: Herpesvirus glycoprotein B ectodomain C-terminal

phrase: NIAPYVFNVTLYYKHITTVTTWALFSRPQITNEYVTRVPIDYHEIVRIDRSGECSSKATYHKNFMFFEAYDNDEAEKKLPLVPSLLRSTVSKAFHTTNFTKRHQTLGYRTSTSVDCVVEYLQARSVYPYDYFGMATGDTVEISPFYTKNTTGPRRHSVYRDYRFLEIANYQVRDLETGQIRPPKKRNFLTDEQFTIGWDAMEEKESV
type: DOMAIN
name: Glycoprot_B_PH1
description: Herpesvirus Glycoprotein B, PH-like domain 1
Protein sequence:
MGRKKKKQLKPWCWYCNRDFDDEKILIQHQKAKHFKCHICHKKLYTGPGLAIHCMQVHKETIDAVPNAIPGRTDIELEIYGMEGIPEKDMDERRRLLEQKTQESQKKKQQDDSDEYDDDDSAASTSFQPQPVQPQQGYIPPMAQPGLPPVPGAPGMPPGIPPLMPGVPPLMPGMPPVMPGMPPGMMPMGGMMPPGPGIPPLMPGMPPGMPPPVPRPGIPPMTQAQAVSAPGILNRPPAPTATVPAPQPPVTKPLFPSAGQMGTPVTSSSTASSNSESLSASSKALFPSTAQAQAAVQGPVGTDFKPLNSTPATTTEPPKPTFPAYTQSTASTTSTTNSTAAKPAASITSKPATLTTTSATSKLIHPDEDISLEERRAQLPKYQRNLPRPGQAPIGNPPVGPIGGMMPPQPGIPQQQGMRPPMPPHGQYGGHHQGMPGYLPGAMPPYGQGPPMVPPYQGGPPRPPMGMRPPVMSQGGRY

Annotated regions:
phrase: PWCWYCNRDFDDEKILIQHQKAK
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: FKCHICHKKLYTGPGLAIHCMQV
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: CWYCNRDFDDEKILIQHQKAK
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: CHICHKKLYTGPGLAIHCMQV
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type
Protein sequence:
MEAEGLDWLLVPLHQLVSWGAAAAMVFGGVVPYVPQYRDIRRTQNADGFSTYVCLVLLVANILRILFWFGRRFESPLLWQSAIMILTMLLMLKLCTEVRVANELNARRRSFTAADSKDEEVKVAPRRSFLDFDPHHFWQWSSFSDYVQCVLAFTGVAGYITYLSIDSALFVETLGFLAVLTEAMLGVPQLYRNHRHQSTEGMSIKMVLMWTSGDAFKTAYFLLKGAPLQFSVCGLLQVLVDLAILGQAYAFARHPQKPAPHAVHPTGTKAL

Annotated regions:
phrase: VETLGFLAVLTEAMLGVPQLYRNHRHQSTEGMSIKMVLMWTSGDAFKTAYFLLKGAPL
type: REPEAT
name: PQ-loop_rpt
description: PQ-loop repeat

phrase: SWGAAAAMVFGGVVPYVPQYRDIRRTQNADGFSTYVCLVLLVANILRILFWFGRRFE
type: REPEAT
name: PQ-loop_rpt
description: PQ-loop repeat

phrase: VPYVPQYRDIRRTQNADGFSTYVCLVLLVAN
type: REPEAT
name: PQ-loop_rpt
description: PQ-loop repeat

phrase: MLGVPQLYRNHRHQSTEGMSIKMVLMWTSGD
type: REPEAT
name: PQ-loop_rpt
description: PQ-loop repeat
Protein sequence:
MKTRVVLILALSVCIEAASEVIRARAYIFKAEAGKIPTELIGTIDFDQSGSFLKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHGAPDDSNRHIGDLGNIESPASGDTLISVSDSLASLSGQYSIIGRSVVIHEKTDDLGRGTSDQSKTTGNAGSRLACGTIGTVEERILETTTASLPPVTQSQPIGSSSYYYSTFYLPIILYFLLSRIL

Annotated regions:
phrase: GFHIHEKGDTGNGCLSAGGHYN
type: DOMAIN
name: SOD_Cu_Zn_dom
description: Superoxide dismutase, copper/zinc binding domain

phrase: HIGDLGNIE
type: DOMAIN
name: SOD_Cu_Zn_dom
description: Superoxide dismutase, copper/zinc binding domain

phrase: VSDSLASLSGQYSIIGRSVVIH
type: DOMAIN
name: SOD_Cu_Zn_dom
description: Superoxide dismutase, copper/zinc binding domain

phrase: DDLGRGTSDQSKTTGNAGSRLACGTI
type: DOMAIN
name: SOD_Cu_Zn_dom
description: Superoxide dismutase, copper/zinc binding domain

phrase: GNAGSRLACGT
type: BINDING_SITE
name: SOD_Cu/Zn_BS
description: Superoxide dismutase, copper/zinc, binding site

phrase: GTIDFDQSGSFLKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHGAPDDSNRHIGDLGNIESPASGDTLISVSDSLASLSGQYSIIGRSVVIHEKTDDLGRGTSDQSKTTGNAGSRLACGT
type: DOMAIN
name: SOD_Cu_Zn_dom
description: Superoxide dismutase, copper/zinc binding domain

phrase: GFHIHEKGDT
type: BINDING_SITE
name: SOD_Cu/Zn_BS
description: Superoxide dismutase, copper/zinc, binding site

phrase: IGTIDFDQSGSFLKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHGAPDDSNRHIGDLGNIESPASGDTLISVSDSLASLSGQYSIIGRSVVIHEKTDDLGRGTSDQSKTTGNAGSRLA
type: DOMAIN
name: SOD_Cu_Zn_dom
description: Superoxide dismutase, copper/zinc binding domain
Protein sequence:
MTNDPGSGFAAVWNAVVAELNGEPNTDGDAGTGTTLTSPLTPQQRAWLNLVQPLTIVEGFALLSVPSSFVQNEIERHLRTPITAALSRRLGQQIQLGVRIAPPPADDDDDSVAAAVEDPGLEASPETSQEVSDEIDDFGENAPNSRQSWPTHFKKRSTDADTSASAGGTSLNRRYTFDTFVIGASNRFAHAATLAIAEAPARAYNPLFIWGESGLGKTHLLHAAGNYAQRLFPGMRVKYVSTEEFTNDFINSLRDDRKVAFKRSYRDVDVLLVDDIQFIEGKEGIQEEFFHTFNTLHNANKQIVISSDRPPKQLATLEDRLRTRFEWGLITDVQPPELETRIAILRKKAQMERLAVPDDVLELIASSIERNIRELEGALIRVTAFASLNKTPIDKALAEIVLRDLIADAGTMQISAATIMAATAEYFDTTVEELRGPGKTRALAQSRQIAMYLCRELTDLSLPKIGQAFGRDHTTVMYAQRKILSEMAERREVFDHVKELTTRIRQRSKR

Annotated regions:
phrase: LNRRYTFDTFVIGASNRFAHAATLAIAEAPARAYNPLFIWGESGLGKTHLLHAAGNYAQRLFPGMRVKYVSTEEFTNDFINSLRDDRKVAFKRSYRDVDVLLVDDIQFIEGKEGIQEEFFHTFNTLHNANKQIVISSDRPPKQLATLEDRLRTRFEWGLIT
type: DOMAIN
name: DnaA_dom
description: Chromosomal replication initiator protein DnaA, ATPAse domain

phrase: AYNPLFIWGESGLGKTHLLHAAGNYAQRLFPGMRVKYVSTEEFTNDFINSLRDDRKVAFKRSYRDVDVLLVDDIQFIEGKEGIQEEFFHTFNTLHNANKQIVISSDRPPKQLATLEDRLRTRFEWGLI
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: SAATIMAATAEYFDTTVEELRGPGKTRALAQSRQIAMYLCRELTDLSLPKIGQAFGRDHTTVMYAQRK
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: IGQAFGRDHTTVMYAQRK
type: CONSERVED_SITE
name: Chromosome_initiator_DnaA_CS
description: Chromosomal replication control, initiator DnaA, conserved site

phrase: TIMAATAEYFDTTVEELRGPGKTRALAQSRQIAMYLCRELTDLSLPKIGQAFGRDHTTVMYAQRK
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: TIMAATAEYFDTTVEELRGPGKTRALAQSRQIAMYLCRELTDLSLPKIGQAFGRDHTTVMYAQRKILSEMAERREVFDHVKELTTR
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal
Protein sequence:
MSENTTATTRARRKVREGLVVSDKMDKTVVVEVEDRVKHGLYGKIMRRTSKLKVHDEQNSAGIGDRVLIMETRPLSATKRWRLVEILEKAK

Annotated regions:
phrase: GDRVLIMETRPL
type: CONSERVED_SITE
name: Ribosomal_uS17_CS
description: Small ribosomal subunit protein uS17, conserved site
Protein sequence:
MTDLTAQEPAWQTRDHLDDPVIGELRNRFGPDAFTVQATRTGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRIRTPSYAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR

Annotated regions:
phrase: HHRGAEKMGER
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_49kDa_CS
description: NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site

phrase: DVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRIRTPSYAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVD
type: DOMAIN
name: NADH_Q_OxRdtase_suD
description: NADH-quinone oxidoreductase, subunit D

phrase: ERETWDLFGITFDGHPNLRRI
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_CS
description: NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site

phrase: VWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHLISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARA
type: DOMAIN
name: NADH_UbQ_OxRdtase_30kDa_su
description: NADH:ubiquinone oxidoreductase, 30kDa subunit
Protein sequence:
MTKGQRLIKIREIITQSEIETQDELVEELRNAGYKVTQATVSRDIKELHLVKVPLNDGRYKYSLPADQRFNPLGKLRRLLGDSFISIDSAQNLIVMHVLPGNANALGVLLDHLNWPELLGTVCGDDTILMITRNEEAATEVTERILGML

Annotated regions:
phrase: GDSFISIDSAQNLIVMHVLPGNANALGVLLDHLNWPELLGTVCGDDTILMITRNEEAATEVTER
type: DOMAIN
name: Arg_repress_C
description: Arginine repressor, C-terminal

phrase: MTKGQRLIKIREIITQSEIETQDELVEELRNAGYKVTQATVSRDIKELHLVKVPLNDGRYKYSLPADQR
type: DOMAIN
name: Arg_repress_DNA-bd
description: Arginine repressor, DNA-binding domain
Protein sequence:
MKHYRTDPATTAIISRERLPLVLVGLPGAGKTTVARLLAAALGIQVTDTDAEIRRRARMTIPEIFSAEGEEGFRDRETRALRDVLESLGAAHGIIALGGGGILRPENREMLRHHTVVYLSARPATAAQHVGSGEGRPLISPGSDSDAALTAVQASQGALTGVLARMEALDAERRPLYEEIATATVPTDGLTPAQVAALVLVSLGATPAATARGLAHAGIRSDAPACRPPSPEEPAAPAPRRTARPRVTEDPEGATTVHVPGAPGYDVVIGRGLAPQVTRAVLASPGQGAGGVGIIHSGVLAQAAGGLAGDLHAAGLRTALIEVPDGEASKRADVLSSIWERLGRAGVGRDGCLIGVGGGATTDLAGFAAATWLRGIPVVQVPTTLLAMVDAAVGGKTGIDTAAGKNLVGAFHTPSAVVADLGTLAGLPLDELRAGLGEVIKCGLIHDEEILRLVGADPAACLRSDAPVLAELVRRAVLVKAAVVAEDLTESGLREILNYGHTYGHAIERITDYAWRHGEAVGVGCVFAAEIAHRRGLLSGKGLARHREALAAVGLPVSFPDGAERWDDLRAAMRSDKKNRAGRLRMVLIEDRFGRARPVRGVEPTPGELEAAHRAVTASPEGGA

Annotated regions:
phrase: IEVPDGEASKRADVLSSIWERLGRAGVGRDGCLIGVGGGATTDLAGFAAATWLRGIPVVQVPTTLLAMVDAAVGGKTGIDTAAGKNLVGAFHTPSAVVADLGTLAGLPLDEL
type: DOMAIN
name: DHQS/DOIS_N
description: 3-dehydroquinate synthase, N-terminal domain

phrase: RDRETRALRDVLESLGAAHGIIALGGGG
type: CONSERVED_SITE
name: Shikimate_kinase_CS
description: Shikimate kinase, conserved site

phrase: GLGEVIKCGLIHDEEILRLVGADPAACLRSDAPVLAELVRRAVLVKAAVVAEDLTESGLREILNYGHTYGHAIERITDYAWRHGEAVGVGCVFAAEIAHRRGLLSGKGLARHREALAAVGLPVSFPDGAERWDDLRAAMRSDKK
type: DOMAIN
name: DHQS_C
description: 3-dehydroquinate synthase, C-terminal domain
Protein sequence:
MTTKNNKQLKSVLFMFLLLIGAYVKAQEKNVSGTVTSSEDGMMLPGVNIIVKGTASGTTSDFDGNYNIEVPDSNAILQFNYLGFVTQEIKVGAQTNISVVLQVDQNELEEIVVIGYGTVKKSDVSGSVSSVKSAELTAYPTVSAEQALQGRAAGVQVQSNNGGEPGAPIKVRIRGGTSINASSDALIVVDGFVGASMPAPQDIASMEVLKDASATAIYGSRGANGVIMVTTKKGTSSKPTLELNTSYSLQHVNNTIDLLDADEFATYRQAYSENYVQGPANTDWQDEIYTTGSISNTQLAFSGGSDNSKYYISGNYFAQDGVVINSNLERFTILSNVDVDITKRFKVGLNVFGGRSTKDGVSTQAQTGGTGGGDVISSAYRFAPDLGIYNADGTYTINSLGDDIDNPYALATESVDERKADTYRANFYAAYEFIDGLEFKTTFGFSSENTQIGKFKPTTILAGAGVGGEATFEYRNTTNTLSENYLTYNKSFGAHNLSLLGGYSYQKVQNEGAFAGARSFVTNEVSYRNLEGGAVTMQPSSYLNETELVSVFGRVNYEYASKYIFTFTARRDGSSNFSKNNKYAFFPSGAIAWNMAKENFLKDSNTITTWKWRASYGATGNPSISPYETLAKFSSVYAVVGDQQVNGVVLTDFANDNLKWETSKQLDLGLDVALFDNRLELSFDYYTIKTEDLLFPRPLPEYSGVSSQIQNIGELENKGYEFSINSRNITNQDFTWSTAFNFSRNKNKMVKLPDGDDLFIDSAPGHFL

Annotated regions:
phrase: KSDVSGSVSSVKSAELTAYPTVSAEQALQGRAAGVQVQSNNGGEPGAPIKVRIRGGTSINASSDALIVVDGFVGASMPAPQDIASMEVLKDASATAIYGSRGANG
type: DOMAIN
name: Plug_dom
description: TonB-dependent receptor, plug domain

phrase: DIASMEVLKDASATAIYGSRGANGVIMVTT
type: CONSERVED_SITE
name: TonB-dep_OMP_SusC/RagA_CS
description: TonB-dependent outer membrane protein SusC/RagA, conserved site

phrase: YRFAPDLGIYNADGTYTINSLGDDIDNPYALATESVDERKADTYRANFYAAYEFIDGLEFKTTFGFSSENTQIGKFKPTTILAGAGVGGEATFEYRNTTNTLSENYLTYNKSFGAHNLSLLGGYSYQKVQNEGAFAGARSFVTNEVSYRNLEGGAVTMQPSSYLNETELVSVFGRVNYEYASKYIFTFTARRDGSSNFSKNNKYAFFPSGAIAWNMAKENFLKDSNTITTWKWRASYGATGNPSISPYETLAKFSSVYAVVGDQQVNGVVLTDFANDNLKWETSKQLDLGLDVALFDNRLELSFDYYTIKTEDLLFPRPLPEYSGVSSQIQNIGELENKGYEFSINSRNITNQDFTWSTAFNFSRNKNKMVKLPDGDDLFIDSA
type: DOMAIN
name: TonB-dep_rcpt_b-brl
description: TonB-dependent receptor-like, beta-barrel
Protein sequence:
MTDVPVSRIRNFCIIAHIDHGKSTLADRMLQMTETVAQRKMKEQFLDNMDLERERGITIKLQAARMNYRSKDGEDYVLNLIDTPGHVDFSYEVSRSLAACEGALLVVDSSQGVEAQTLANVYLALENNLEIIPILNKIDLPGSEPERVANEIEEVVGLDCTGIIKASAKAGIGVDEILESIVHLVPPPSDTVDKPLRALIFDSYYDPYRGVIVYFRVMDGTVKTGDRVRLMASGKEYEIDELGVLSPNQIEVESLHAGEVGYFAAAIKAVEDARVGDTITLAEAPAKEPLPGYTEAKPMVFCGLFPTDADQYEDLREALNRLKLNDAALSYEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYDLDLITTAPSVIYRVTTIDGEVIQVDNPSLLPSPQEREKVEEPYIEVEMITPETYVGTLMELCQSRRGVFKDMRYFTLSRTSLVYELPLAEVVTDFFDQLKSRSRGYASMEYQLIGYRENPLVKLDILVNGDSVDALAMIVHRDKAYYVGRALTEKLKELIPRHQFKVPIQAAIGSKVIASEHIPALRKDVLAKCYGGDISRKKKLLQKQAKGKKRMKAIGTVDVPQEAFMAVLKLDPQ

Annotated regions:
phrase: GVIVYFRVMDGTVKTGDRVRLMASGKEYEIDELGVLSPNQIEVESLHAGEVGYFAAAIKAVEDARVGDTI
type: DOMAIN
name: EFTu-like_2
description: Translation elongation factor EFTu-like, domain 2

phrase: SRIRNFCIIAHIDHGKSTLADRMLQMTETVAQRKMKEQFLDNMDLERERGITIKLQAARMNYRSKDGEDYVLNLIDTPGHVDFSYEVSRSLAACEGALLVVDSSQGVEAQTLANVYLALENNLEIIPILNKIDLPGSEPERVANEIEEVVGLDCTGIIKASAKAGIGVDEILESIVHLVPPP
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: VNGDSVDALAMIVHRDKAYYVGRALTEKLKELIPRHQFKVPIQAAIGSKVIASEHIPALRKDVLAKCYGGDISRKKKLLQKQAKGKKRMKAIGTVDVPQEAFMAVL
type: DOMAIN
name: LepA_CTD
description: GTP-binding protein LepA, C-terminal

phrase: NFCIIAHIDHGKS
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: ERGITIKL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: NLIDTPGHVD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: RSLAACEGALL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: IIPILNKID
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: VEEPYIEVEMITPETYVGTLMELCQSRRGVFKDMRYFTLSRTSLVYELPLAEVVTDFFDQLKSRSRGYASMEYQLIGYRENPLVKL
type: DOMAIN
name: EFG_V-like
description: Elongation factor EFG, domain V-like

phrase: RIRNFCIIAHIDHGKSTLADRMLQMTETVAQRKMKEQFLDNMDLERERGITIKLQAARMNYRSKDGEDYVLNLIDTPGHVDFSYEVSRSLAACEGALLVVDSSQGVEAQTLANVYLALENNLEIIPILNKIDLPGSEPERVANEIEEVVGLDCTGIIKASAKAGIGVDEILESIVHLVP
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: EPYIEVEMITPETYVGTLMELCQSRRGVFKDMRYFTLSRTSLVYELPLAEVVTDFFDQLKSRSRGYASMEYQLIGYR
type: DOMAIN
name: LepA_IV
description: Elongation factor 4, domain IV

phrase: DNMDLERERGITIKL
type: CONSERVED_SITE
name: G_TR_CS
description: Tr-type G domain, conserved site

phrase: RNFCIIAHIDHGKSTLADRMLQMTETVAQRKMKEQFLDNMDLERERGITIKLQAARMNYRSKDGEDYVLNLIDTPGHVDFSYEVSRSLAACEGALLVVDSSQGVEAQTLANVYLALENNLEIIPILNKIDLPGSEPERVANEIEEVVGLDCTGIIKASAKAGIGVDEILE
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain
Protein sequence:
MTEQRTIASSATREDEAADASIRPKRLADYLGQQPVRDQMEIYIQAAKARGEAMDHVLIFGPPGLGKTTLSHVIANELGVSLRVTSGPVIEKAGDLAALLTNLQPHDVLFIDEIHRLSPVVEEVLYPAMEDFQIDIMIGDGPAARSIKIDLPPFTLIGATTRAGLLTAPLRDRFGIVQRLEFYSPQELTRIVIRSAAILGIDCTPDGAAEIARRARGTPRIANRLLRRVRDFAQVKAAGHIDLAVAQAAMQMLKVDPEGFDELDRRMLRTIVDHFDGGPVGVESLAASLSEERGTLEDVIEPYLIQQGFLIRTARGRMVTPKAYLHLGLKPPRDRAPAIGEPGDLF

Annotated regions:
phrase: EGFDELDRRMLRTIVDHFDGGPVGVESLAASLSEERGTLEDVIEPYLIQQGFLIRTARGRMVTPKAYLH
type: DOMAIN
name: RuvB_C
description: RuvB C-terminal winged helix domain

phrase: AMDHVLIFGPPGLGKTTLSHVIANELGVSLRVTSGPVIEKAGDLAALLTNLQPHDVLFIDEIHRLSPVVEEVLYPAMEDFQIDIMIGDGPAARSIKIDLPPFTLIGATTRAGLLTAPLRDRFGIVQR
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: YSPQELTRIVIRSAAILGIDCTPDGAAEIARRARGTPRIANRLLRRVRDFAQVKAAGHIDLAVAQAAMQMLKV
type: DOMAIN
name: AAA_lid_4
description: RuvB, AAA lid domain

phrase: IRPKRLADYLGQQPVRDQMEIYIQAAKARGEAMDHVLIFGPPGLGKTTLSHVIANELGVSLRVTSGPVIEKAGDLAALLTNLQPHDVLFIDEIHRLSPVVEEVLYPAMEDFQIDIMIGDGPAARSIKIDLPPFTLIGATTRAGLLTAPLRDRFGIVQR
type: DOMAIN
name: RuvB-like_N
description: RuvB-like P-loop domain
Protein sequence:
MVKVLVASGNQKKLAELEAVLAELGIAGVELVSMRDVDAYPEPVEDGLTFEDNALIKARAGAAATGLACVADDSGLAVTALKGMPGVLSARWSGTHGDDAANNALLLGQMTDIALRDAAFVSCCALVGPAGDEFTAEGRWEGQLLREPRGENGFGYDPIFQPNDGGGRSAAQLSAAEKNERSHRARALTALAPHIADLVGATVKE

Annotated regions:
Protein sequence:
MAHKKGTGSTRNGRDSQSKRLGVKRYGGQVVRAGNILVRQRGTKFHPGNNVGRGSDDTLFALIDGVVKFEYKTRSRQKISVYPVPQEEPATVAG

Annotated regions:
phrase: GNILVRQRGTKFHP
type: CONSERVED_SITE
name: Ribosomal_bL27_CS
description: Large ribosomal subunit protein bL27, conserved site