nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MLRSTGFFRAIDCPYWSGAPGGPCRRPYCHFRHRGARGSGAPGDGGEAPPAAGLGYDPYNPELPKPPAQRENGTLGLGEEPRPDVLELELVNQAIEAVRSEVELEQRRYRELLETTREHRSAEAPALAPRGPNASPTVGPDEDAFPLAFDYSPGSHGLLSPDAGYQPTPLAAPAEPGSKYSLASLDRGQGRGGGGGGALEYVPKAVSQPRRHSRPVPSGKYVVDNSRPPTDLEYDPLSNYSARHLSRASSRDERAAKRPRGSRGSEPYTPAPKKLCDPFGSCDARFSDSEDEAATVPGNEPTTASTPKARADPEIKATGQPPSKEGLEAEGGGLRETKETAVQCDVGDLQPPPAKPASPAQVQSSQDGGCPKEGKPKKKKTGAPPAPSCKDGAQGKDKTKDKGRGRPVEKPRADKKGPQASSPRRKAERPEGTKKKPSSATPVATSGKGRPDRPARRPSPTSGDSRPAAGRGPPRPLQLPDRKSTKAPSGKLVERKARSLDEGASQDAPKLKKRALSHADLFGDESEDEAAGPGVPSVWPSALPSLSSDSDSDSDSSLGFPEAQGPPKRLKASPPPSPAPSSSSSSSSSTSSAGADVDYSALEKEVDFDSDPMEECLRIFNESTSVKTEDRGRLARQPPKEEKSEEKGLSGLTTLFPGQKRRISHLSKQGQEVEPPRRGPAVPPARPPTAQEVCYLRAQQAQRASASLLQAPARLAEKSPSVHISAPGEKRRIAHIPNPRLAAAPTGAKRTLAASGSQSSNGPEPGGQQLKTRTLSGMASKTTTTIIPKRIAHSPSLQSLKKPIIPKEFGGKVPTVIRQRYLNLFIEECLKFCTSNQEAIEKALNEEKVAYDRSPSKNIYLNVAVNTLKKLRGLAPSAVPGLSKTSGRRVVSHEVVLGGRLAAKTSFSLSRPSSPRVEDLKGAALYSRLREYLLTQDQLKENGYPFPHPERPGGAIIFTAEEKRPKDSSCRTCCRCGTEYLVSSSGRCIRDEECYYHWGRLRRNRVAGGWETQYMCCSAAAGSVGCQVAKQHVQDGRKERLEGFVKTFEKELSGDTHPGIYALDCEMSYTTYGLELTRVTVVDTDVHVVYDTFVKPDNEIVDYNTRFSGVTEADLADTSVTLRDVQAVLLSMFSADTILIGHSLESDLLALKVIHSTVVDTSVLFPHRLGLPYKRSLRNLMADYLRQIIQDNVDGHSSSEDAGACMHLVIWKVREDAKTKR

Annotated regions:
phrase: KPIIPKEFGGKVPTVIRQRYLNLFIEECLKFCTSNQEAIEKALNEEKVAYDRSPSKNIYLNVAVNTLKKLRGLAPSAVPGLSKTSGRRVVSHEVVLGGRLAAKTSFSLSRPSSPRVEDLKGAALYSRLREYLLTQDQLKENGYPFPHPERPGGAIIFTAE
type: DOMAIN
name: REXO1-like_dom
description: RNA exonuclease 1 homolog-like domain

phrase: GIYALDCEMSYTTYGLELTRVTVVDTDVHVVYDTFVKPDNEIVDYNTRFSGVTEADLADTSVTLRDVQAVLLSMFSADTILIGHSLESDLLALKVIHSTVVDTSVLFPHRLGLPYKRSLRNLMADYLRQIIQDNVDGHSSSEDAGACMHLVIWKVREDA
type: DOMAIN
name: Exonuclease_RNaseT/DNA_pol3
description: Exonuclease, RNase T/DNA polymerase III

phrase: YALDCEMSYTTYGLELTRVTVVDTDVHVVYDTFVKPDNEIVDYNTRFSGVTEADLADTSVTLRDVQAVLLSMFSADTILIGHSLESDLLALKVIHSTVVDTSVLFPHRLGLPYKRSLRNLMADYLRQIIQDNVDGHSSSEDAGACMHL
type: DOMAIN
name: REX1-like_exo
description: RNA exonuclease 1-like, exonuclease domain
Protein sequence:
MSMKCFQCQETVKNQGCTVKGVCGKPDNVANLQDVLIYTLKGISFYAHEGRNLGVKDEEVDRFVMDNLFATVTNVNFSEQDFIDRIKQSFKIRDQIKEQVMLKYREKYGENLDNKVPSNATWYTEDELNFKTKGEEVGVHSSDNEDINSLRELLTYGIKGIAAYAHHAYTLNQKDDEIFAFMHKGLAATTDDSLSVDDLVSLVMECGKFGVNTMALLDKANTEAYGHPEPTQINIGVRNNPGILISGHDLKDMQELLEQTEGTGVDVYTHGEMLPANAYPAFKKYDHFVGNYGNAWWQQNEEFEKFNGPILMTTNCLVPPKDSYKDRVYTTGVVGFDGVTHIPEREAGESKDFSQIIEHAKKCAAPEELEQGEIPGGFAHNAVLSVADKVVEAVKNGDIKRFVVMGGCDGRHKSREYYTEFAKALPQDTIILTAGCAKYRYNKLDLGDIGGIPRVLDAGQCNDSYSLVVIAQKLAEAFELEDINDLPVSYNIAWYEQKAVTVLLSLLYLGVKKIYLGPTLPAFVSENVLNVLVDKFDMRPNSNVDEDLEKIMAGE

Annotated regions:
Protein sequence:
MNWITNYVRPKINSMLGRREVPENLWIKCPETGEMVFHRDLEENKWVIPQSGFHMKMPAKARLKDLFDGGIYEAFPQPKVAQDPLKFRDSKKYSDRLRDSRAKTELEDTIVAGLGQVQGIKLVAVAHEFNFIGGSLGIAAGEAIVKAFERAIAEKCPLVMFPASGGARMQEGILSLMQLPRTTVALNMLKEAGLPYIVVLTNPTTGGVTASYAMLGDIHMAEPGAEIGFAGKRVIEQTLREKLPEGFQTSEYLLEHGMVDMVVKRHDIPETLARVLNILMKKPAKAVKRDTATELAPLPVAASA

Annotated regions:
phrase: YSDRLRDSRAKTELEDTIVAGLGQVQGIKLVAVAHEFNFIGGSLGIAAGEAIVKAFERAIAEKCPLVMFPASGGARMQEGILSLMQLPRTTVALNMLKEAGLPYIVVLTNPTTGGVTASYAMLGDIHMAEPGAEIGFAGKRVIEQTLRE
type: DOMAIN
name: AcCoA_carboxyl_beta
description: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta

phrase: LWIKCPETGEMVFHRDLEENKWVIPQSGFHMKMPAKARLKDLFDGGIYEAFPQPKVAQDPLKFRDSKKYSDRLRDSRAKTELEDTIVAGLGQVQGIKLVAVAHEFNFIGGSLGIAAGEAIVKAFERAIAEKCPLVMFPASGGARMQEGILSLMQLPRTTVALNMLKEAGLPYIVVLTNPTTGGVTASYAMLGDIHMAEPGAEIGFAGKRVIEQTLREKLPEGFQTSEYLLEHGMVDMVVKRHDIPETLARVLNILMKKPAKAVKRDTAT
type: DOMAIN
name: COA_CT_N
description: Acetyl-coenzyme A carboxyltransferase, N-terminal
Protein sequence:
MAKVAKDLNPGVQKMSLGQQQSARGVACLRCKGMCSGFEPHSWRKICKSCKCSQEEHCLSSDLDDDRKIGRLLMDSKYATLTARVKGGDGIRIYKRNRMIMTNPIATGKDPTFDTITYEWAPPGVTQKLGLQYMELIPKERQPVTGTEGALYRRRQLMHQLPIYDQDPSRCRGLVENELKAMEEFVKHYKSEALGVGEVALPGQGGLPKEENKTQEKPEGTETTAPTTNGSLGDPSKEVEYVCELCKGAAPVDSPVVYADRAGYSKQWHPTCFQCIKCSEPLVDLIYFWKDGAPWCGRHYCESVRPRCSGCDEIIFSEDYQRVEDLAWHRKHFICEGCEQLLSGRAYIVTKGQLLCPTCSKSKRS

Annotated regions:
phrase: CSGCDEIIFSEDYQRVEDLAWHRKHFICEGCEQL
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: YVCELCKGAAPVDSPVVYADRAGYSKQWHPTCFQCIKCSEPLVDLIYFWKDGAPWCGRHYCESV
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: CSGCDEIIFSEDYQRVEDLAWHRKHFICEGCEQLLSGRAYIVTKGQLLCPTCS
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: GYSKQWHPTCFQCIKCSEPLVDLIYFWKDGAPWCGRHYC
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: RCSGCDEIIFSEDYQRVEDLAWHRKHFICEGCEQLLSGRAYIVTKGQLLCPT
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: VCELCKGAAPVDSPVVYADRAGYSKQWHPTCFQCIKCSEPLVDLIYFWKDGAPWCGR
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: ITYEWAPPGVTQKLGLQYMELIPKERQPVTGTEGALYRRRQLMHQLPIYDQDPSRCRGLVENELKAMEEFVKHYKSEALGVGEVALP
type: DOMAIN
name: PET_testin
description: PET testin

phrase: MIMTNPIATGKDPTFDTITYEWAPPGVTQKLGLQYMELIPKERQPVTGTEGALYRRRQLMHQLPIYDQDPSRCRGLVENELKAMEEFVKHYKSEALGVGEVALPGQG
type: DOMAIN
name: PET_domain
description: PET domain

phrase: MIMTNPIATGKDPTFDTITYEWAPPGVTQKLGLQYMELIPKERQPVTGTEGALYRRRQLMHQLPIYDQDPSRCRGLVENELKAMEEFVKHYKSEALGVGE
type: DOMAIN
name: PET_domain
description: PET domain

phrase: PRCSGCDEIIFSEDYQRVEDLAWHRKHFICEGCEQLLSGRAYIVTKGQLLCPTCSKSKR
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type
Protein sequence:
MSSKYIVIEGLEGAGKTTARNLVVETLKSLGVTDMTFTREPGGTVLAEKLRSLVLDIKSVGDEVITDNAEVLLFYAARVQLVETVIKPALARGEWVIGDRHDLSTQAYQGGGRGIDRQLLATLRQAVLGDFAPDLTLYLDVDPRIGLERARARGELDRIEQESLDFFNRTRARYLELAAADPRIITIDACQPLEAVSHDIRATVTRWVQEQQ

Annotated regions:
phrase: IEGLEGAGKTTARNLVVETLKSLGVTDMTFTREPGGTVLAEKLRSLVLDIKSVGDEVITDNAEVLLFYAARVQLVETVIKPALARGEWVIGDRHDLSTQAYQGGGRGIDRQLLATLRQAVLGDFAPDLTLYLDVDPRIGLERARARGELDRIEQESLDFFNRTRARYLELAAADPRIITIDACQPLEAVSHD
type: DOMAIN
name: Thymidylate_kin-like_dom
description: Thymidylate kinase-like domain

phrase: IGDRHDLSTQAY
type: CONSERVED_SITE
name: Thymidylate_kin_CS
description: Thymidylate kinase, conserved site
Protein sequence:
MFRLPALPRIPTAPFCPSEVRGCVAIPPDLPLWKKLLRFAGPGLLVSVGYMDPGNWATDIEAGSRYGYSLLFVVLLSSLAAMVLQCLSARLGIVTGKDLARLSRERYRPGAVRVQWLLAELSIVACDLAEVLGCALAFHLLLGVPILGGVALTALDTLIVLGLKGKNFRQLEAIVLGLILTIGLCYFVELALIRPHWPSVAGALVPSWQALSAREPLYLAIGILGATVMPHNLYLHSSIVQTRVVSETEPARREAVGLSRLDTIVSLSLALLVNGAILVLAAAAFHANGHQDVADIQDAHRLLEPIVGTAVAGVLFGIALLAAGQSSTFTGTIAGQILMEGFLELRIPCWQRRLATRALALIPAFVGVAMLGDHAIGRLLVISQVVLGFQLPFAMFPLIRMTGDRALMGTFANGRLTSAVAWCLFAVISVANLWLVWQVLAG

Annotated regions:
Protein sequence:
MHPPRPTTDLPEDFYIPMALDAPNITALSPFLVPQTHLGSPGLFRAMAAFMFLLIALGVPINTLTIFCTARFRKLRSHLNYILVNLALANLLVILVGSTTACYSFSQMYFALGPTACKIEGFAATLGGMVSLWSLAVVAFERFLVICKPLGNFTFRGSHAVLGCVATWVLGFVASAPPLFGWSRYIPEGLQCSCGPDWYTTDNKWHNESYVLFLFTFCFGVPLAIIVFSYGRLLITLRAVARQQEQSATTQKADREVTKMVVVMVLGFLVCWAPYTAFALWVVTHRGRSFEVGLASIPSVFSKSSTVYNPVIYVLMNKQFRSCMLKLLFCGRSPFGDDEDVSGSSQATQVSSVSSSHVAPA

Annotated regions:
phrase: IPSVFSKSSTVYNPVI
type: BINDING_SITE
name: Retinal_BS
description: Visual pigments (opsins) retinal binding site

phrase: INTLTIFCTARFRKLRSHLNYILVNLALANLLVILVGSTTACYSFSQMYFALGPTACKIEGFAATLGGMVSLWSLAVVAFERFLVICKPLGNFTFRGSHAVLGCVATWVLGFVASAPPLFGWSRYIPEGLQCSCGPDWYTTDNKWHNESYVLFLFTFCFGVPLAIIVFSYGRLLITLRAVARQQEQSATTQKADREVTKMVVVMVLGFLVCWAPYTAFALWVVTHRGRSFEVGLASIPSVFSKSSTVYNPVI
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM
Protein sequence:
MANIKLKNYQSYAKINLFLHILNKRDDGYHNLQTWFTFLDLKDHISFRFNNSNKIEITSNIQIASKEDNLIYKAVKEFQEAYNIESIGVDIDIIKNIPMGAGLGGGSSNAATTLIALRDYYLPELSNEQMIPLATKLGADVPIFVYGRSAWAEGIGDVLYSKDFEQQYVVLVKPNIHISTKEFFESENLVKTKNMLPRDLSFDTSVMHNDFENVFFAKYPEFKSQLDEIDQDFRMTGTGSCFYLLSKDLNKLQQLARKVDKSLDKWVVKTLNYAY

Annotated regions:
phrase: NDFENVFFAKYPEFKSQLDEIDQDFRMTGTGSCFYLLSKDLNKLQQLARKVDKS
type: DOMAIN
name: GHMP_kinase_C_dom
description: GHMP kinase, C-terminal domain

phrase: NLIYKAVKEFQEAYNIESIGVDIDIIKNIPMGAGLGGGSSNAATTLIALRDYYLPELSNEQMIPLATKLGADVPIFVYG
type: DOMAIN
name: GHMP_kinase_N_dom
description: GHMP kinase N-terminal domain
Protein sequence:
MKSIKVCVVGEGGIGKTSMLLSYTSNSISNEYQPTVFDNYSTLLMHNKKPYNLSLWDTAGQEEFSKLRRLSYPQTDVFLLCFSLINPSSFSNILDSWVQELNENCPNTPIVLVGTQMDLKSNSVILDRLCEKKQLPISTQQGIELSKKINAFDFVECSALTQKNLHLVFEKAIDACEAHQKCQSKEKKKNNKKFKKNCIIM

Annotated regions:
phrase: MKSIKVCVVGEGGIGKTSMLLSYTSNSISNEYQPTVFDNYSTLLMHNKKPYNLSLWDTAGQEEFSKLRRLSYPQTDVFLLCFSLINPSSFSNILDSWVQELNENCPNTPIVLVGTQMDLKSNSVILDRLCEKKQLPISTQQGIELSKKINAFDFVE
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain
Protein sequence:
MHEGNRSPRPMRMEAKTVKPRHPLVSRLAELLVSTWGEYLQLEPYHLPADLGFVEGQLEGDRLTIVNRCYQSRVFRKLHLELATIGPNLDILHCVMYPRPQFDLPIYGTDIVASTQMVSAAIVDLSPVRGELPPAYLAGLEPSFARCTDFGQLRNLPPWGTIFSPRCVFARVVTPTEADLFMEISRAYLRFHCEQAARAEAVDTATEAQILAGQRHYCEQQQQNDKTRRILAQAFDEAWAERYIRTVLFDLPQ

Annotated regions:
Protein sequence:
MSKIEVLLADDNREFVSLLEEYISSQYDMNVIGVAYNGNEVVRLLQERVPDVLILDIIMPHLDGLAVLEQIQAMRLSPQPKIIMLTAFGQEEITKKAVELGAAYYILKPFDMEVLAQRIRQIITTKPASSFVTSVKPQSTLQVRGRNLDASITSIIHEIGVPAHIKGYLYLREAITMVYNDVELLGSITKVLYPDIAKKFNTTASHVERAIR

Annotated regions:
phrase: VLLADDNREFVSLLEEYISSQYDMNVIGVAYNGNEVVRLLQERVPDVLILDIIMPHLDGLAVLEQIQAMRLSPQPKIIMLTAFGQEEITKKAVELGAAYYILKPFDMEVLAQRI
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: IEVLLADDNREFVSLLEEYISSQYDMNVIGVAYNGNEVVRLLQERVPDVLILDIIMPHLDGLAVLEQIQAMRLSPQPKIIMLTAFGQEEITKKAVELGAAYYILKPFDMEVLAQR
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: ITSIIHEIGVPAHIKGYLYLREAITMVYNDVELLGSITKVLYPDIAKKFNTTASHVERAI
type: DOMAIN
name: Spo0A_C
description: Sporulation initiation factor Spo0A, C-terminal

phrase: EVLLADDNREFVSLLEEYISSQYDMNVIGVAYNGNEVVRLLQERVPDVLILDIIMPHLDGLAVLEQIQAMRLSPQPKIIMLTAFGQEEITKKAVELGAAYYILKPFDMEVLAQRIRQI
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain
Protein sequence:
MSTLDELIQKARHLRSEGHSPGQIADELSLSMETVTWLLTQEKGAATPKDVHIDWTAVSGESQLLVESAQMLLSRLHLKNPEGPVPQVYVGIAISGIPLATLMAVTEGVRIGIYHPAKHAGGDEPIGSMSGNFDIHAGERIVVVDDVITSGKTLQEVINYIKRHGAVPVACCVLFDKRGIRDIDGVPVYSLFKVSRID

Annotated regions:
phrase: VYVGIAISGIPLATLMAVTEGVRIGIYHPAKHAGGDEPIGSMSGNFDIHAGERIVVVDDVITSGKTLQEVINYIKRHGAVPVACCVLFDKRGIRDI
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: VGIAISGIPLATLMAVTEGVRIGIYHPAKHAGGDEPIGSMSGNFDIHAGERIVVVDDVITSGKTLQEVINYIKRHGAVPVACCVLFDKRGIRDIDGVPVYSLF
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain
Protein sequence:
MGSPRPVVLSGPSGAGKSTLLKKLLQEHSSIFGFSVSHTTRDPRPGEENGKDYYFVTREVMQRDIAAGDFIEHAEFSGNLYGTSKAAVRAVQAMNRICVLDVDLQGVRNIKKTDLQPIYIFVQPPSLDVLEQRLRQRNTETEESLAKRLAAAKADMESSKEPGLFDLIIINDSLDKAYWALKEALSEEIKKAQATGHS

Annotated regions:
phrase: TTRDPRPGEENGKDYYF
type: CONSERVED_SITE
name: Guanylate_kinase_CS
description: Guanylate kinase, conserved site

phrase: PRPVVLSGPSGAGKSTLLKKLLQEHSSIFGFSVSHTTRDPRPGEENGKDYYFVTREVMQRDIAAGDFIEHAEFSGNLYGTSKAAVRAVQAMNRICVLDVDLQGVRNIKKTDLQPIYIFVQPPSLDVLEQRLRQRNTETEESLAKRLAAAKADMESSKEPGLFDLIIINDSLDKAYWALKEAL
type: DOMAIN
name: Guanylate_kin-like_dom
description: Guanylate kinase-like domain

phrase: SPRPVVLSGPSGAGKSTLLKKLLQEHSSIFGFSVSHTTRDPRPGEENGKDYYFVTREVMQRDIAAGDFIEHAEFSGNLYGTSKAAVRAVQAMNRICVLDVDLQGVRNIKKTDLQPIYIFVQPPSLDVLEQRLRQRNTETEESLAKRLAAAKADMESSKEPGLFDLIIINDSLDKAYWALKEALSEE
type: DOMAIN
name: GK/Ca_channel_bsu
description: Guanylate kinase/L-type calcium channel beta subunit

phrase: PRPVVLSGPSGAGKSTLLKKLLQEHSSIFGFSVSHTTRDPRPGEENGKDYYFVTREVMQRDIAAGDFIEHAEFSGNLYGTSKAAVRAVQAMNRICVLDVDLQGVRNIKKTDLQPIYIFVQPPSLDVLEQRLRQRNTETEESLAKRLAAAKADMESSKEPGLFDLIIINDSLDKAYWALKEALS
type: DOMAIN
name: GK/Ca_channel_bsu
description: Guanylate kinase/L-type calcium channel beta subunit
Protein sequence:
MRFQPAKPSLFGETLESLTEAVKAAGYPGFRAKQVMEWLYKKRVGTWDAMTNLPKAFRGWLDETYILYPTQPLLDKRSDDVTQKFLLELEDKSLIETVLIRAPQTGVGQEKSRKTVCVSIQVGCAYGCKFCASGLAGFRRNLGPAEVVSQLMHICRMEDAHTERAKDEIASFDNIVFMGMGEPLANYDTLVRTIKILNAEWGLNFGARRITVSTSGVAPKIKQLAEEGVAVRLAISLHGATNEVRNKIMPVNKRYPLEELIPAAKAFKERHGRMLTLEFIMIEDINDSIDQARELAKIAKDLHAHVNCIPYNKVEGLEWVRPSVRKQDAFVDYLRKAGVSVTIRREKGHDINAACGQLRLKTEKQMAEAEAKPSNPFQKPADTE

Annotated regions:
phrase: VSIQVGCAYGCKFCASGLAGFRRNLGPAEVVSQLMHICRMEDAHTERAKDEIASFDNIVFMGMGEPLANYDTLVRTIKILNAEWGLNFGARRITVSTSGVAPKIKQLAEEGVAVRLAISLHGATNEVRNKIMPVNKRYPLEELIPAAKAFKERHGRMLTLEFIMIEDINDSI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: AKPSLFGETLESLTEAVKAAGYPGFRAKQVMEWLYKKRVGTWDAMTNLPKAFRGWLDETYILYPTQPLLDKRSDDVTQKFLLELEDKSLIETVLIRAPQTGVGQEKSRKTVCVSIQVGCAYGCKFCASGLAGFRRNLGPAEVVSQLMHICRMEDAHTERAKDEIASFDNIVFMGMGEPLANYDTLVRTIKILNAEWGLNFGARRITVSTSGVAPKIKQLAEEGVAVRLAISLHGATNEVRNKIMPVNKRYPLEELIPAAKAFKERHGRMLTLEFIMIEDINDSIDQARELAKIAKDLHAHVNCIPYNKVEGLEWVRPSVRKQDAFVDYLRKAGVSVTIRREKGHDINAACGQLRLKTEKQMAE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LFGETLESLTEAVKAAGYPGFRAKQVMEWLYKKRVGTWDAMTNLPKAFRGWLDE
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: KTVCVSIQVGCAYGCKFCASGLAGFRRNLGPAEVVSQLMHICRMEDAHTERAKDEIASFDNIVFMGMGEPLANYDTLVRTIKILNAEWGLNFGARRITVSTSGVAPKIKQLAEEGVAVRLAISLHGATNEVRNKIMPVNKRYPLEELIPAAKAFKERHGRMLTLEFIMIEDINDSIDQARELAKIAKDLHAHVNCIPYNKVEGLEWVRPSVRKQDAFVDYLR
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: EKSRKTVCVSIQVGCAYGCKFCASGLAGFRRNLGPAEVVSQLMHICRMEDAHTERAKDEIASFDNIVFMGMGEPLANYDTLVRTIKILNAEWGLNFGARRITVSTSGVAPKIKQLAEEGVAVRLAISLHGATNEVRNKIMPVNKRYPLEELIPAAKAFKERHGRMLTLEFIMIEDINDSIDQARELAKIAKDLHAHVNCIPYNKVEGLEWVRPSVRKQDAFVDYLRKAGVSVTIRREKGH
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MSMDASNSVESREKERDRRGRGARGSRFTDADGNGNGAGSQGGGVAARDRSRERRNCRVYISNIPYDYRWQDLKDLFRRIVGSIEYVQLFFDESGKARGCGIVEFKDPENVQKALEKMNRYEVNGRELVVKEDHGEQRDQYGRIVRDGGGGGGGGGGVQGGNGGNNGGGGGGGRDHMDDRDRGFSRRDDDRLSGRNNFNMMSNDYNNSSNYNLYGLSASFLESLGISGPLHNKVFVANLDYKVDNKKLKQVFKLAGKVQSVDLSLDKEGNSRGFAVIEYDHPVEAVQAISMLDRQMLFDRRMTVRLDRIPDKNEGIKLPEGLGGVGIGLGPNGEPLRDVAHNLPNGGQSQGQLLGNAQQGSQLGSVGSQPNSSAVSNATTNLLNNLTGVMFGNHAAVQPSPVAPVQKPSLGNNTGSGGLNLNNLNPSILAAVVGNLGNQGGNLSNPLLSSSLSNLGLNLGNSGNDDNLPPSNVGLSNNYSSGGTGGGNSYSSGNNYSGGGGSSNLGYNAYSSSGGMGGGNGGVGVDGNDYNTGNPLDVYGGGSNVGNSNVGSANAVGASRKSDTIIIKNVPITCTWQTLRDKFREIGDVKFAEIRGNDVGVVRFFKERDAELAIALMDGSRLDGRNIKVTYF

Annotated regions:
phrase: TIIIKNVPITCTWQTLRDKFREIGDVKFAEIRGNDVGVVRFFKERDAELAIALMDGSRLDGRNIKV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: RVYISNIPYDYRWQDLKDLFRRIVGSIEYVQLFFDESGKARGCGIVEFKDPENVQKALEKMNRYEVNGRELVV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: KVFVANLDYKVDNKKLKQVFKLAGKVQSVDLSLDKEGNSRGFAVIEYDHPVEAVQAISMLDRQMLFDRRMTV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: CRVYISNIPYDYRWQDLKDLFRRIVGSIEYVQLFFDESGKARGCGIVEFKDPENVQKALEKMNRYEVNGRELVVKEDH
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: DTIIIKNVPITCTWQTLRDKFREIGDVKFAEIRGNDVGVVRFFKERDAELAIALMDGSRLDGRNIKVTY
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: NKVFVANLDYKVDNKKLKQVFKLAGKVQSVDLSLDKEGNSRGFAVIEYDHPVEAVQAISMLDRQMLFDRRMTVRLDR
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: VYISNIPYDYRWQDLKDLFRRIVGSIEYVQLFFDESGKARGCGIVEFKDPENVQKALEKMNRYEVNGRE
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: VFVANLDYKVDNKKLKQVFKLAGKVQSVDLSLDKEGNSRGFAVIEYDHPVEAVQAISMLDRQMLFDRR
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: IIIKNVPITCTWQTLRDKFREIGDVKFAEIRGNDVGVVRFFKERDAELAIALMDGSRLDGRNI
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain
Protein sequence:
MPQVDPELFDRGQFQAELALKASPIAAFKKAIRQAREVLDTRFRSGREIRRLIEDRAWFIDNILQKAWDQFSWSEDADIALVAVGGYGRGELHPYSDIDLLILLDSADHEIFRDSIERFLTLLWDIGLEVGQSVRSVDECAEQARADLTVITNLMESRTIAGPEHLRQRMLQVTSTEHMWPSKDFFLAKRAEQKARHHKYNDTEYNLEPNVKGSPGGLRDIQTILWVARRQYGTLNLRALAGEGFLVESENALLASSQEFLWKVRYALHMLAGRAEDRLLLDHQRSIATLLGFEGEDAKQSIESFMQQYYRVVMSIAQLSDLIIQHFEEVILAPEDEAPPQPINARFQLHDGYIEAINDNVFKRTPFAMLEIFVLMAQHPEIKGVRADTIRLLREHRHLIDDDFRHDIRNTSLFIELFKCEIGIHRNLRRMNRYGILGRYLPEFGFIVGQMQHDLFHIYTVDAHTLNLIKHLRKMQYTPISEKFPLASKLMGKLPKPELIYLAGLYHDIGKGRHGDHSEIGAVDAEAFCVRHQLPQWDTRLIVWLVQNHLVMSTTAQRKDLSDPQVIHDFAQIVVDQTRLDYLYVLTVADIYATNPTLWNSWRASLLRQLYTETKRALRRGLENPVDREEQIRQTQSAALDILVRNGTDPDEVEQLWSQLGDDYFLRHTAGDVAWHSDAILQQPADGGPLVLIKEITQREFEGGTQIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDNDGESIGNNPQRVEQIRKGLTDALRNPDDYPTIIQRRVPRQLKHFAFAPEVTIHNDAQRPVTVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPQLCSRLQDAIVEQLSVSHEPTIEMTRLSI

Annotated regions:
phrase: VDAHTLNLIKHLRKMQYTPISEKFPLASKLMGKLPKPELIYLAGLYHDIGKGRHGDHSEIGAVDAEAFCVRHQLPQWDTRLIVWLVQNHLVMSTTAQRKDLSDPQVIHDFAQIVVDQTRLDY
type: DOMAIN
name: HD_domain
description: HD domain

phrase: QIFIYAPDQHDFFAVTVAAMDQLNLNIHDARIITSSSQFTLDTYIVLDNDGESIGNNPQRVEQIRKGLTDALRNPDDYPTIIQ
type: DOMAIN
name: ACT_dom
description: ACT domain

phrase: TVLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDAH
type: DOMAIN
name: ACT_dom
description: ACT domain

phrase: YTVDAHTLNLIKHLRKMQYTPISEKFPLASKLMGKLPKPELIYLAGLYHDIGKGRHGDHSEIGAVDAEAFCVRHQLPQWDTRLIVWLVQNHLVMSTTAQRKDLSDPQVIHDFAQIVVDQTRLDYLYVLTVADIYATNPTLWNSWRASLLRQL
type: DOMAIN
name: HD/PDEase_dom
description: HD/PDEase domain

phrase: VLELSAPDRPGLLARIGKIFLEFDLSLQNAKIATLGERVEDVFFITDAHNQPLSDPQLCSRLQDAIVEQLSVSHEPTIE
type: DOMAIN
name: ACT_dom
description: ACT domain

phrase: FFLAKRAEQKARHHKYNDTEYNLEPNVKGSPGGLRDIQTILWVARRQYGTLNLRALAGEGFLVESENALLASSQEFLWKVRYALHMLAGRAEDRLLLDHQRSIATLLGFEGEDAKQSIESFMQQYYRVVMSIAQLSD
type: DOMAIN
name: PII_UdlTrfase/GS_AdlTrfase
description: PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase

phrase: HIYTVDAHTLNLIKHLRKMQYTPISEKFPLASKLMGKLPKPELIYLAGLYHDIGKGRHGDHSEIGAVDAEAFCVRHQLPQWDTRLIVWLVQNHLVMSTTAQRKDLSDPQVIHDFAQIVVDQTRLDYLYVLTVADIYATNPTLWNSWR
type: DOMAIN
name: HD/PDEase_dom
description: HD/PDEase domain

phrase: ASKLMGKLPKPELIYLAGLYHDIGKGRHGDHSEIGAVDAEAFCVRHQLPQWDTRLIVWLVQNHLVMSTTAQRKDLSDPQVIHDFAQI
type: DOMAIN
name: HD_domain
description: HD domain

phrase: KAWDQFSWSEDADIALVAVGGYGRGELHPYSDIDLLILLDSADHEIFRDS
type: DOMAIN
name: Polymerase_NTP_transf_dom
description: Polymerase, nucleotidyl transferase domain
Protein sequence:
MRYLVPLLVFMVLGMGCLGGGGEEMVKVSSVFGNDEFIPAKYTCEGIDVNPPLRIEGISENAKSLVIIVDDPDAPLGTFTHWIAWNIPPVEEIPEGIPKQGEVEKPIHMIQGRNDFGRIGYNGPCPPRGHGVHHYHFKVYVLDTTLNLRPGATREELEKAMEGHIIQFGELVGLYERK

Annotated regions:
Protein sequence:
MKITNFTKSFLLYEIIVGMFLTLKYFFKSKVTIRYPNEVSKLSPRFKGEHALRRYPDGEERCIACKLCEAICPAQAITIEAKEQPNGSRRTTKYDIDMTKCIYCGLCQEACPVDAIVEGPNLEFATETHQELLYNKEKLLRNGDMWEHVIAKNLKVDSIYR

Annotated regions:
phrase: CIYCGLCQEAC
type: CONSERVED_SITE
name: 4Fe4S_Fe_S_CS
description: 4Fe-4S ferredoxin, iron-sulphur binding, conserved site

phrase: LRRYPDGEERCIACKLCEAICPAQAITIEA
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: RCIACKLCEAICPAQAITIEAKEQPNGSRRTTKYDIDMTKCIYCGLCQEACPVD
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: TKYDIDMTKCIYCGLCQEACPVDAIVEGP
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain
Protein sequence:
MSLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNNKVDPAEVEDVIWGCVNQTLEQGWNIARMASLLTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTNNGDVFVIGGVEHMGHVSMMHGVDPNPHMSLHAAKASGMMGLTAEMLGKMHGITREQQDAFGLRSHQLAHKATLEGKFKDEIIPMQGYDENGFLRVFDYDETIRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMSAQRAQDLGIQPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLSISDIDFFELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQNGGTFGVSTMCIGLGQGIATVFERV

Annotated regions:
phrase: NLHGGAIALGHPFGCS
type: CONSERVED_SITE
name: Thiolase_CS
description: Thiolase, conserved site

phrase: QPLAVIRSMAVAGVDPAIMGYGPVPATQKALKRAGLSISDIDFFELNEAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQNGGTFGVSTMCIGLGQGIATVFE
type: DOMAIN
name: Thiolase_C
description: Thiolase, C-terminal

phrase: GVSTMCIGLGQGI
type: ACTIVE_SITE
name: Thiolase_AS
description: Thiolase, active site

phrase: VVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNNKVDPAEVEDVIWGCVNQTLEQGWNIARMASLLTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTNNGDVFVIGGVEHMGHVSMMHGVDPNPHMSLHAAKASGMMGLTAEMLGKMHGITREQQDAFGLRSHQLAHKATLEGKFKDEIIPMQGYDENGFLRVFDYDETIRPDTTLESLAALKPAFNPKGGTVTAGTSSQITDGASCMIVMS
type: DOMAIN
name: Thiolase_N
description: Thiolase, N-terminal

phrase: VSRLCGSSMSALHTAAQA
type: ACTIVE_SITE
name: Thiolase_acyl_enz_int_AS
description: Thiolase, acyl-enzyme intermediate active site
Protein sequence:
MSERDSGSSGPVKAKAAAPRAKTSGQAPFGAFVRKPVEKTEGKAKANAANAGSGATEMRMETAESWPVDAVEVGAIVDAYGLKGWVKVAAHADAGHGGDALLSAKRWWLLKGQERKSAPSLQAKTHSDSVVAHLGGVTDRDVALALRGSRVYISRSEFPALGADEFYWVDLLGLDVVNVAGVSLGKVADMIDNGAHSVLRIEYPATDKSGKPVTGERLIPFVGVFVKTVDQAAKQITVDWEADY

Annotated regions:
phrase: WVDLLGLDVVNVAGVSLGKVADMIDNGAHSVLRIEYPATDKSGKPVTGERLIPFVGVFVKTVDQAAKQITVDWE
type: DOMAIN
name: PRC_RimM
description: Ribosome maturation factor RimM, PRC barrel domain

phrase: VGAIVDAYGLKGWVKVAAHADAGHGGDALLSAKRWWLLKGQERKSAPSLQAKTHSDSVVAHLGGVTDRDVALALRGSRVYISR
type: DOMAIN
name: RimM_N
description: RimM, N-terminal
Protein sequence:
MAEVSAYKDTLNLLQTPFNMRANAPVREPEIQQFWADRQIYETLSRQNPGAPFVLHDGPPYANGALHMGHALNKTLKDIINKYQLLQGRKVRYVPGWDCHGLPIELKVLQELSSEERRNLTPLTLRQKAKAYALAQVEQQSQSFQRYGVWADWDAPYLTLTPEYEAAQIDVFGQMVLKGYIYRGLKPVHWSPSSRTALAEAELEYPDGHTSRSIYVAMPIVQLSEAAQPLLGNYANLALAIWTTTPWTIPANLAVAVNGELTYAVVQAGDCHLIVAAELAESLSKTFATELTVLATFPGSVLEHSRYRHPLYDRESPVVIGGDYITTESGTGLVHTAPGHGQDDFIVGNRYGLEVFCPVDDKGDFTAAVGDRLVGKNVLKDANAAVIEWLTEVGALLKEESYAHRYPYDWRTKKPTIFRATEQWFASVEGFREQALQAIAEVDWIPAQGENRITSMVSERSDWCISRQRTWGVPIPVFYDEESGEALLNAETIAHVRAIVAERGSDAWWELDVADLLPEPYRSNGRRYRKGTDTMDVWFDSGSSWAAVASQREGLHYPADLYLEGSDQHRGWFQSSLLTSVACNGHAPYRRVLTHGFALDEKGRKMSKSLGNVVDPAIVINGGKDQKQEPPYGADVLRLWVSSVDYSSDVPIGKNILKQMADVYRKIRNTARFLLGNLHDFDPAKDALPWEKLPELDRYLLHRLREVILEIQDAFESFQFFRFFQTVQNFCVVDLSNFYLDIGKDRLYISAPDSLRRRSCQTVLAICVEALATAIAPVLSHMAEDIWQSLPYPARTKSVFQAGWVQLQDDWNQPELAAKWQQLRDLRSEVNKVLEQARRDQAIGSSLEAKLQLWVADSDWRAALADRNPADSLSGTAVDDLRYLFLVSQVELRDQPTGLTEAKYHAQTEDWAIAVVDAEGQKCDRCWNYSTTVGQSSEHPDLCDRCVSALQGTF

Annotated regions:
phrase: PYANGALHMGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: GQKCDRCWNYSTTVGQSSEHPDLCDRCV
type: DOMAIN
name: Znf_FPG/IleRS
description: Zinc finger, FPG/IleRS-type

phrase: IQQFWADRQIYETLSRQNPGAPFVLHDGPPYANGALHMGHALNKTLKDIINKYQLLQGRKVRYVPGWDCHGLPIELKVLQELSSEERRNLTPLTLRQKAKAYALAQVEQQSQSFQRYGVWADWDAPYLTLTPEYEAAQIDVFGQMVLKGYIYRGLKPVHWSPSSRTALAEAELEYPDGHTSRSIYVAMPIVQLSEAAQPLLGNYANLALAIWTTTPWTIPANLAVAVNGELTYAVVQAGDCHLIVAAELAESLSKTFATELTVLATFPGSVLEHSRYRHPLYDRESPVVIGGDYITTESGTGLVHTAPGHGQDDFIVGNRYGLEVFCPVDDKGDFTAAVGDRLVGKNVLKDANAAVIEWLTEVGALLKEESYAHRYPYDWRTKKPTIFRATEQWFASVEGFREQALQAIAEVDWIPAQGENRITSMVSERSDWCISRQRTWGVPIPVFYDEESGEALLNAETIAHVRAIVAERGSDAWWELDVADLLPEPYRSNGRRYRKGTDTMDVWFDSGSSWAAVASQREGLHYPADLYLEGSDQHRGWFQSSLLTSVACNGHAPYRRVLTHGFALDEKGRKMSKSLGNVVDPAIVINGGKDQKQEPPYGADVLRLWVSSVDYSSD
type: DOMAIN
name: aa-tRNA-synth_Ia
description: Aminoacyl-tRNA synthetase, class Ia

phrase: IGKNILKQMADVYRKIRNTARFLLGNLHDFDPAKDALPWEKLPELDRYLLHRLREVILEIQDAFESFQFFRFFQTVQNFCVVDLSNFYLDIGKDRLYISAPDSLRRRSCQTVLAICVEALATAIAPVLSHMAEDIWQSLPYPARTKSVFQAGWVQLQDDWNQPELAAKWQQLRDLRSEV
type: DOMAIN
name: Anticodon_Ile_BEm
description: Isoleucyl tRNA synthetase type 1, anticodon-binding domain

phrase: DRYLLHRLREVILEIQDAFESFQFFRFFQTVQNFCVVDLSNFYLDIGKDRLYISAPDSLRRRSCQTVLAICVEALATAIAPVLSHMAEDIWQSLPYPARTKSVFQAGWVQLQDDWNQPELAAKWQQLRDLRSEVNKVLEQARRDQAIGSSLEAK
type: DOMAIN
name: M/V/L/I-tRNA-synth_anticd-bd
description: Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
Protein sequence:
GFLICGSWKPVPGLRSILFFRPLIKAKLNQGVTLVLDRYAFSGVAFTSAKENFSLDWCKQPDVGLPKPDLILFLQLQLLDAASRGEFGLERYETGTFQEQVLLCFQQLMSEKNLNWKVVDASKSIEDVHEEIRALSEDAIQNAAQRPLEELWK

Annotated regions:
phrase: VLDRYAFSGVAF
type: CONSERVED_SITE
name: Thymidylate_kin_CS
description: Thymidylate kinase, conserved site

phrase: FRPLIKAKLNQGVTLVLDRYAFSGVAFTSAKENFSLDWCKQPDVGLPKPDLILFLQLQLLDAASRGEFGLERYETGTFQEQVLLCFQQLMSEKNLNWKVVDASKSIEDVHEE
type: DOMAIN
name: Thymidylate_kin-like_dom
description: Thymidylate kinase-like domain