nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MPISNPRKRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEEIYFILHNLAAVIEEEASRT

Annotated regions:
phrase: HGNEELGKKAADELIKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWI
type: REPEAT
name: E_motif
description: E motif

phrase: NPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCL
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: DCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNAC
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: RDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACV
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: DIHIWTTLISGYAKLGDMEAAEKLFCEMPE
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: DVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIK
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: YSWNNMVSGYVKSGMLVRARVVFDSMPERDV
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: WNTMISALAQHGLGHKALRMLDDMIKFRVQP
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: IWTTLISGYAKLGDMEAAEKLFCEMPE
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: VSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKF
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: SIIDAYAKCGQMESAKRCFDEMTVKD
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: VILNACSHSGLVEEGLRWFESMTVQHGIVP
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: VSWTALIAGYVRQGSGNRALDLFRKMIALGVK
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: NHLIGMYMKCGKPIDACKVFDQMHLR
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: SSLIDMYSKSGSLEASERVF
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: NLYSWNNMVSGYVKSGMLVRARVVFDSMPE
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: DIHIWTTLISGYAKLGDMEAAEKLFCE
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: DCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQ
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: NPVSWTALIAGYVRQGSGNRALDLFRKMIALGVK
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat
Protein sequence:
MNSSMASAGLGSRRKDPVYRGIRCRSGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMALKGREAVLNFPGSVGSYPVPESTSAADIRAAAAAAAAMKGCEEGEEEKKAKEKKSSSSKSRARECHVDNDVGSSSWCGTEFMDEEEVLNMPNLLANMAEGMMVAPPSWMGSRPSDDSPENSNDEDLWGY

Annotated regions:
phrase: YRGIRCRSGKW
type: DOMAIN
name: AP2/ERF_dom
description: AP2/ERF domain

phrase: AYDVAAMALKGREAVLNFPG
type: DOMAIN
name: AP2/ERF_dom
description: AP2/ERF domain

phrase: VYRGIRCRSGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMALKGREAVLNFPGSVGS
type: DOMAIN
name: AP2/ERF_dom
description: AP2/ERF domain

phrase: VYRGIRCRSGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMALKGREAVLNF
type: DOMAIN
name: AP2/ERF_dom
description: AP2/ERF domain

phrase: PVYRGIRCRSGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMALK
type: DOMAIN
name: AP2/ERF_dom
description: AP2/ERF domain

phrase: YRGIRCRSGKWVSEIREPRKTTRIWLGTYPMAEMAAAAYDVAAMALKGREAVLNF
type: DOMAIN
name: AP2/ERF_dom
description: AP2/ERF domain
Protein sequence:
MADDAGAAGGPGGPGGPGMGGRGGFRGGFGSGVRGRGRGRGRGRGRGRGARGGKAEDKEWLPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHLVKTHTRVSVQRTQAPAVATT

Annotated regions:
phrase: GQRTRFKAFVAIGDYNGHVGLGVKCSKEVATA
type: CONSERVED_SITE
name: Ribosomal_uS5_N_CS
description: Small ribosomal subunit protein uS5, N-terminal, conserved site

phrase: LKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPV
type: DOMAIN
name: Ribosomal_uS5_N
description: Small ribosomal subunit protein uS5, N-terminal

phrase: GRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWK
type: DOMAIN
name: Ribosomal_uS5_C
description: Small ribosomal subunit protein uS5, C-terminal

phrase: LKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVP
type: DOMAIN
name: Ribosomal_uS5_N
description: Small ribosomal subunit protein uS5, N-terminal
Protein sequence:
MQEEILYKWNYDDFKDKKFKIPKLNMPWDYKFSPYFEEISLENREWIKGTKLISEESDFEKFVYLKTILMNSYLYPHCNKEVFRYINRLNEYIYIVDDFYLEDNVKGQEWVDELFDRNSKFVKENYIGSIMWEIFDDIISVGNDGATDYLIKKTHEWMDSVILFNSKKVNSKFTFEEYTNSRGVDVGMIFGLACTKVHIPPLCDEIENHPVYIDMLANYYNPIHLLINDIYSFNKETKSVRLGNYVKIAAYQLGSIQLAMDHLSKLFDEYIGKIQEKFAELEKIFPNNKDLETHLYIIKTIIACNFNCSTNPNYPRYYGEVLEAELKIINE

Annotated regions:
Protein sequence:
MTKIVSIVGRPNVGKSTLFNRIIGYKKSIVNSKSGITRDRNYGFCNWNGIEFCLIDTGGYTNESKNIFDKKICEQFLFALAESDVILFLVDPSNDILGIDYDISKRIRKLKKSIYLVINKIDIYKNIYNTYKYCKFGITKTYCISSINGTGTEKLLDSIVSNFDKNIKIYKKNIPRIAIVGRPNVGKSTLINTLLNKNKNIVTNISGTTRDSIDVLYSKFGIECILVDTAGIRKKKNIKEDIEFYSVMRAIKSIQNSDVSLLIIDSKSGFESQDINIFKIIENNNKGIVLLINKWDIFNNNYLINSYENKIKKIIAPFNDVPIFFTSSFTKKDIIKSIKTAVKITFNLRLRIKTSLLNKIILPILNKNPHPSINGKLITIKYCSQIQTYNPQFIFFTNYPNNIKESYKRFIENNIREKFNFTGIPIKILFRLK

Annotated regions:
phrase: VSIVGRPNVGKSTLFNRIIGYKKSIVNSKSGITRDRNYGFCNWNGIEFCLIDTGGYTNESKNIFDKKICEQFLFALAESDVILFLVDPSNDILGIDYDISKRIRKLKKSIYLVIN
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: RIAIVGRPNVGKSTLINTLLNKNKNIVTNISGTTRDSIDVLYSKFGIECILVDTAGIRKKKNIKEDIEFYSVMRAIKSIQNSDVSLLIIDSKSGFESQDINIFKIIENNNKGIVLLIN
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: IVSIVGRPNVGKSTLFNRIIGYKKSIVNSKSGITRDRNYGFCNWNGIEFCLIDTGGYTNESKNIFDKKICEQFLFALAESDVILFLVDPSNDILGIDYDISKRIRKLKKSIYLVINKIDIY
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: IPRIAIVGRPNVGKSTLINTLLNKNKNIVTNISGTTRDSIDVLYSKFGIECILVDTAGIRKKKNIKEDIEFYSVMRAIKSIQNSDVSLLIIDSKSGFESQDINIFKIIENNNKGIVLLINKWDIFNNNYLINSYENKIKKIIAPFNDVPIFFTSSFTKKDIIK
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: VSIVGRPNVGKSTLFNRIIG
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: CEQFLFALAESDVILFLV
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: PRIAIVGRPNVGKSTLINTLLNKNKNIVTNISGTTRDSIDVLYSKFGIECILVDTAGIRKKKNIKEDIEFYSVMRAIKSIQNSDVSLLIIDSKSGFESQDINIFKIIENNNKGIVLLINKWDIFNNNYLINSYENKIKKIIAPFNDVPIFFTSSFTKKDIIKSIKTAVKITFNL
type: DOMAIN
name: G_ENGA
description: EngA-type guanine nucleotide-binding (G) domain

phrase: RIKTSLLNKIILPILNKNPHPSINGKLITIKYCSQIQTYNPQFIFFTNYPNNIKESYKRFIENNIREKFNFTGIPIKILF
type: DOMAIN
name: KH_dom-like
description: GTPase Der, C-terminal KH-domain-like
Protein sequence:
MPEAIVYLTETEICQKCKTENAVVHARVEKLCSNCYIRFIRGKLRKQMHDERYKVKFGRAVEQYGTQRILLALSGGESSLVLLDIFGSLLQEQNELHKGKQGFELVVVNLDEYELDSLNNRIQKVFPELLAKYQPVKISLNVLSLDSYVDEESLHRILLTPDFRAMSKSIDPTRVTLTEILRLCPNKSSAEDLLTIVYNDLILRVAAKEDCQTVVYGHCMTRLANEIIALTVKGRGSIIHKSIADHTETIDDKEIKVMFPLREILQAEISAYVKLAELNKYVISSTVQKSKINKNLTIRDLTTNYFKQLDATGYASTASTVAKTGEKLGSPSNVLCQCQICGADIHQNPSNWLKRITVTDPAAITTDEEKEYYEMFRASLSPDNEDKNNSDSPIDICFGCTVTLGGVKGDTGFIWPLQGSSELKYEYRNDNQEKQKVLDEFVLTDDEGDIEV

Annotated regions:
Protein sequence:
MSVLLVGVSHRSAPVSVLEKVAITDADRPKLIDKMLASSHISEAMIVSTCNRVEVYAVVDAFHGGLAEVGELLTRHSGLAMPDLTKHAYVRYSEAAAEHLFAVASGLDSMVVGEQQVLSQIRGAYATADAQQAVGRTLHELAQHALRVGKRVHSETGIDRAGASVVSVALDRAAQVLGDLAGRTAVVVGAGAMGGLSVAHLARAGIGRIIVVNRTIERARRLAETAASYGVESSALELDRLHEAMSAADVVLSCTGAVGAVVTLADTHRALADRDRAEFPAGDRPLVFCDLGLPRDVEPAVAGLPGVAVIDIESLQRDPAAGAAADDTAAARSIVAEELAKYLAGQRMAEVTPTVAALRQRAAEVVEAELLRLDSRLPGLAEPERDEVARTVRRVVDKLLHAPTVRVKQLASTPGGDSYAEALRELFELKPGAAQAVAAPMEITAIGPDRTAGLADDFTPGHRLDFEQHLGEEGKPA

Annotated regions:
phrase: VGVSHRSAPVSVLEKVAITDADRPKLIDKMLASSHISEAMIVSTCNRVEVYAVVDAFHGGLAEVGELLTRHSGLAMPDLTKHAYVRYSEAAAEHLFAVASGLDSMVVGEQQVLSQIRGAYATADAQQAVGRTLHELAQHALRVGKRVHSE
type: DOMAIN
name: 4pyrrol_synth_GluRdtase_N
description: Glutamyl-tRNA reductase, N-terminal

phrase: HLFAVASGLDSMVVGEQQVLSQI
type: CONSERVED_SITE
name: GluRdtase_CS
description: Glutamyl-tRNA reductase, conserved site

phrase: AAQVLGDLAGRTAVVVGAGAMGGLSVAHLARAGIGRIIVVNRTIERARRLAETAASYGVESSALELDRLHEAMSAADVVLSCTGAVGAVVTLADTHRALADRDRAEFPAGDRPLVFCDLGLPRDVEPAVAGLPGVAVIDIESL
type: DOMAIN
name: Shikm_DH/Glu-tRNA_Rdtase
description: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase

phrase: ARSIVAEELAKYLAGQRMAEVTPTVAALRQRAAEVVEAELLRLDSRLPGLAEPERDEVARTVRRVVDKLLHAPTVRVKQLASTPGGDSYAEALRELFE
type: DOMAIN
name: 4pyrrol_synth_GluRdtase_dimer
description: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain
Protein sequence:
MADLSLLQEDLQEDADGFGVDDYSSESDVIIIPSALDFVSQDEMLTPLGRLDKYAASENIFNRQMVARSLLDTLREVCDDERDCIAVLERISRLADDSEPTVRAELMEQVPHIALFCQENRPSIPYAFSKFLLPIVVRYLADQNNQVRKTSQAALLALLEQELIERFDVETKVCPVLIELTAPDSNDDVKTEAVAIMCKMAPMVGKDITERLILPRFCEMCCDCRMFHVRKVCAANFGDICSVVGQQATEEMLLPRFFQLCSDNVWGVRKACAECFMAVSCATCQEIRRTKLSALFINLISDPSRWVRQAAFQSLGPFISTFANPSSSGQYFKEESKSSEEMSVENKNRTRDQEAPEDVQVRPEDTPSDLSVSNSSVILENTMEDHAAEASGKPLGEISVPLDSSLLCTLSSESHQEAASNENDKKPGNYKSMLRPEVGTTSQDSALLDQELYNSFHFWRTPLPEIDLDIELEQNSGGKPSPEGPEEESEGPVPSSPNITMATRKELEEMIENLEPHIDDPDVKAQVEVLSAALRASSLDAHEETISIEKRSDLQDELDINELPNCKINQEDSVPLISDAVENMDSTLHYIHSDSDLSNNSSFSPDEERRTKVQDVVPQALLDQYLSMTDPSRAQTVDTEIAKHCAYSLPGVALTLGRQNWHCLRETYETLASDMQWKVRRTLAFSIHELAVILGDQLTAADLVPIFNGFLKDLDEVRIGVLKHLHDFLKLLHIDKRREYLYQLQEFLVTDNSRNWRFRAELAEQLILLLELYSPRDVYDYLRPIALNLCADKVSSVRWISYKLVSEMVKKLHAATPPTFGVDLINELVENFGRCPKWSGRQAFVFVCQTVIEDDCLPMDQFAVHLMPHLLTLANDRVPNVRVLLAKTLRQTLLEKDYFLASASCHQEAVEQTIMALQMDRDSDVKYFASIHPASTKISEDAMSTASSTY

Annotated regions:
phrase: LLPIVVRYLADQNNQVRKTSQAALLALLEQELIERFDV
type: REPEAT
name: HEAT_type_2
description: HEAT, type 2

phrase: YNSFHFWRTPLPEIDLDIELEQNSGGKP
type: DOMAIN
name: WRNPLPNID
description: Putative WW-binding domain and destruction box

phrase: LLPRFFQLCSDNVWGVRKACAECFM
type: REPEAT
name: HEAT
description: HEAT repeat

phrase: VCPVLIELTAPDSNDDVKTEAVAIMCKMAPMVGKDITER
type: REPEAT
name: HEAT_type_2
description: HEAT, type 2
Protein sequence:
MALHNGPRKKTRYKFKKDLRSRGVLPVTRVIQQFELGQKVHIVCEPSIQKGMPHRRFHGKTGSVVGQRGRAWLVEIRDGNKFKTVISRPQHLRAQQF

Annotated regions:
phrase: GQKVHIVCEPSIQKGMPHRRFHGKT
type: CONSERVED_SITE
name: Ribosomal_eL21_CS
description: Large ribosomal subunit protein eL21, conserved site
Protein sequence:
MEGWDPNTKSTLTRIPLLTTKAGPRDGAAWTQRLKEEYKSLIAYTQMNKSNDNDWFRISASNPEGTRWTGKCWYVHNLLKYEFDLQFDIPITYPATAPELELPEIDGKTQKMYRGGKICLTVHFKPLWAKNCPRFGIAHALCLGLAPWLAAEIPILVDSGAIKHKDDAATSAES

Annotated regions:
Protein sequence:
MRYNQFSYIPTSLERAAEELKELGFDLDLQKTAKASLESFLRKLFFHYPDSDYPLSHLIAKNDMDALSFFQSEQELSKEVFDLLALQVLGFIPGVDFTEADAFLDKLAFPIHFDETEIIKHIHHLLATRCKSGMTLIDDLVSQGMLTMDNDYHFFNGKSLATFDTSQLIREVVYVEAPLDTDQDGQLDLIKVNIIRPQSQKPLPTLMTPSPYHQGINEVANDKKLYRMEKELVVKKRRQITVEDRDFIPLETQPCKLPIGQNLESFSYINSYSLNDYFLARGFANIYVSGVGTAGSTGFMTSGNYAQIESFKAVIDWLNGRATAYTSHSKTHQVRADWANGLVCTTGKSYLGTMSTGLATTGVDGLAMIIAESAISSWYNYYRENGLVCSPGGYPGEDLDVLTELTYSRNLLAGDYLRHNDRYQELLNQQSQALDRQSGDYNQFWHDRNYLKNAHQIKCDVVYTHGLQDWNVKPRQVYEIFNALPSTINKHLFLHQGEHVYMHNWQSIDFRESMNALLCQKLLGLANDFSLPEMIWQDNTCPQNWQERKVFGTSTIKELDLGQELLLIDNHYGEDEFKAYGKDFRAFKAALFKGKANQALIDILLEEDLPINGEIVLQLKVKSSENKGLLSAQILDYGKKKRLGDLPIALTQSSIDNGQNFSREPLKELPFREDSYRVISKGFMNLQNRNNLSSIETIPNNKWMTVRLPLQPTIYHLEKGDTLRVILYTTDFEHTVRDNSNYALTIDLSQSQLIVPIASN

Annotated regions:
phrase: DGQLDLIKVNIIRPQSQKPLPTLMTPSPYHQGINEVANDKKLYRMEKELVVKKRRQITVEDRDFIPLETQPCKLPIGQNLESFSYINSYSLNDYFLARGFANIYVSGVGTAGSTGFMTSGNYAQIESFKAVIDWLNGRATAYTSHSKTHQVRADWANGLVCTTGKSYLGTMSTGLATTGVDGLAMIIAESAISSWYNYYRENGLVCSPGGYPGEDLDVLTELTYSRNLLAGDYLRHNDRYQELLNQQSQALDRQSGDYNQFWHDRNYLKNAHQIKCDVVYTHGLQDWNVKPRQVYEIFNALPSTINKHLFLHQGEHV
type: DOMAIN
name: Xaa-Pro-like_dom
description: Xaa-Pro dipeptidyl-peptidase-like domain

phrase: NALLCQKLLGLANDFSLPEMIWQDNTCPQNWQERKVFGTSTIKELDLGQELLLIDNHYGEDEFKAYGKDFRAFKAALFKGKANQALIDILLEEDLPINGEIVLQLKVKSSENKGLLSAQILDYGKKKRLGDLPIALTQSSIDNGQNFSREPLKELPFREDSYRVISKGFMNLQNRNNLSSIETIPNNKWMTVRLPLQPTIYHLEKGDTLRVILYTTDFEHTVRDNSNYALTIDLSQSQL
type: DOMAIN
name: Xaa-Pro_dipept_C
description: Xaa-Pro dipeptidyl-peptidase, C-terminal

phrase: MRYNQFSYIPTSLERAAEELKELGFDLDLQKTAKASLESFLRKLFFHYPDSDYPLSHLIAKNDMDALSFFQSEQELSKEVFDLLALQVLGFIPGVDFTEADAFLDKLAFPIHFDETEIIKHIHHLLATRCKSGMTLIDDLVSQ
type: DOMAIN
name: PepX_N_dom
description: X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain

phrase: MRYNQFSYIPTSLERAAEELKELGFDLDLQKTAKASLESFLRKLFFHYPDSDYPLSHLIAKNDMDALSFFQSEQELSKEVFDLLALQVLGFIPGVDFTEADAFLDKLAFPIHFDETEIIKHIHHLLATRCKSGMTLIDDLVSQG
type: DOMAIN
name: PepX_N_dom
description: X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal domain

phrase: DFSLPEMIWQDNTCPQNWQERKVFGTSTIKELDLGQELLLIDNHYGEDEFKAYGKDFRAFKAALFKGKANQALIDILLEEDLPINGEIVLQLKVKSSENKGLLSAQILDYGKKKRLGDLPIALTQSSIDNGQNFSREPLKELPFREDSYRVISKGFMNLQNRNNLSSIETIPNNKWMTVRLPLQPTIYHLEKGDTLRVILYTTDFEHTVRDNSNYALTIDLSQ
type: DOMAIN
name: Xaa-Pro_dipept_C
description: Xaa-Pro dipeptidyl-peptidase, C-terminal
Protein sequence:
MLFNQIASNKRKTIVLLIVFFMLLAAIGAAVGYLWLDSLVGGMAIALIIGFIYAFSMIFQSTNIVMAMNNAKEITVDEMPDYYHIVEDMAMVAQIPMPRVYVIDDPSLNAFATGSSPQNAAVAATTGLLAIMNREELEGVIGHEVSHIRNYDIRISTIAVALASAVTLISSIGGRMMWFGGGRSRRSNDNEGGGYLQIILLIFSLLAIILAPLAASLVQLAISRQREYLADASSVELTRNPQGMIRALQKLEQSQPMAHSVDNASAALYINDPKKKSGLKHLFYTHPPIADRIRRLEQV

Annotated regions:
phrase: HIVEDMAMVAQIPMPRVYVIDDPSLNAFATGSSPQNAAVAATTGLLAIMNREELEGVIGHEVSHIRNYDIRISTIAVALASAVTLISSIGGRMMWFGGGRSRRSNDNEGGGYLQIILLIFSLLAIILAPLAASLVQLAISRQREYLADASSVELTRNPQGMIRALQKLEQSQPMAHSVDNASAALYINDPKKKSGLKHLFYTHPPIADRIRRLE
type: DOMAIN
name: Peptidase_M48
description: Peptidase M48
Protein sequence:
MSRKNKALLEIAKDIGGDEAVEIVKALEKKGEATDEELAEITGIRVNTVRKILYALYDEKLADFKRIKDEETGWYYYYWHLETKRLPEIIRARKLRELERLKKMLQEETSEVYYHCGNPEHPKLTFDEAFEYGFTCPICGEILQEYDNSAVIEELKKRIEELEIELGLRPSPKKEKKKTRAKAKRKTRKK

Annotated regions:
phrase: ALLEIAKDIGGDEAVEIVKALEKKGEATDEELAEITGIRVNTVRKILYALYDEKLADFKRIKDEETGWYYYYWHLETKRLPEIIRARKLRELERLKKMLQEE
type: DOMAIN
name: TFIIEa/SarR/Rpc3_HTH_dom
description: TFIIEalpha/SarR/Rpc3 HTH domain

phrase: KNKALLEIAKDIGGDEAVEIVKALEKKGEATDEELAEITGIRVNTVRKILYALYDEKLADFKRIKDEETGWYYYYWHLETKRL
type: DOMAIN
name: TFIIE/TFIIEa_HTH
description: Transcription factor TFE/TFIIEalpha HTH domain

phrase: DEAVEIVKALEKKGEATDEELAEITGIRVNTVRKILYALYDEKLADFKRIKDEETGWYYYYWHLETKRLPEIIRARKLRELERLKKMLQEETSEVYYHCGNPEHPKLTFDEAFEYGFTCPICGEILQEYDNSAVIEELK
type: DOMAIN
name: TFIIE_asu
description: Transcription initiation factor IIE subunit alpha, N-terminal
Protein sequence:
MRVKGIQRNWKQWWIWGILGFWVLMMCNVTGNLWVTVYYGVPVWKEAKTTLFCASDAKAYDQEVHNIWATHACVPTDPNPQELVLANVTENFNMWDNDMVDQMHQDIISLWDQSLKPCVKLTPLCVTLNCTKENVTRNGTVEVNDTNTMGVMMKNCSFNMTTEVRDKTTKVHALFYKLDIVQLKEGSNTSEYRLINCNTSAITQACPKVKFDPIPIHYCAPAGYAILKCNNKTFNGTGPCTNVSTVQCTHGIKPVVSTQLLLNGSLAEEEIIIRSKNLTDNAKTIIVQLKEPVLINCTRPGNNTRTSIRIGPGQTFYATGAIIGDIRQAHCNISGTAWNKTLQKVGEKLAERFHNKTIKFTNHSGGDVEVVNNIINCGGGFFYFNTSSLFNNTYCPNNPNATYNATENSTITIQCKIKQIVNMWQEVGRAMYPPPIKGPITCASNITGLLLTRDGGANSNNTETFRPGGGDMKDNWRSELYKYKVVEIKPLGIAPTKAKRRVVEREKRAVGIGAVFLGFLGAAGSTMGAASITLTVQARQLLFGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQTRVLAIERYLKDQQLLGIWGCSGKLICTTAVPWNSSWSNKSLGDIWDNMTWMQWDREINNYTNTIYKLLEESQNQQEKNEQELLALDKWQNLWNWFGITHWLWYIKIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQTLFPSPRGPDRPGGIEEEGGEQDKGKSIRLVSGFLALVWDDLRSLCLFSYHRL

Annotated regions:
phrase: VQARQLLFGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQTRVLAIERYLKDQQLLGIWGCSGKLICTTAVPWNSSWSNKSLGDIWDNMTWMQWDREINNYTNTIYKLLEESQNQQEKNEQELLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASITLTVQARQLLFGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQTRVLAIERYLKDQQLLGIWGCSGKLICTTAVPWNSSWSNKSLGDIWDNMTWMQWDREINNYTNTIYKLLEESQNQQEKNEQELLALDKWQNLWNWFGITHWLWYIKIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: TVEVNDTNTMGVMMKNCSFNMTTEVRDKTTKVHALFYKLDIVQLKEGSNTSEYRLINCNTSAITQACPKVKFDPIPIHYCAPAGYAILKCNNKTFNGTGPCTNVSTVQCTHGIKPVVSTQLLLNGSLAEEEIIIRSKNLTDNAKTIIVQLKEPVLINCTRPGNNTRTSIRIGPGQTFYATGAIIGDIRQAHCNISGTAWNKTLQKVGEKLAERFHNKTIKFTNHSGGDVEVVNNIINCGGGFFYFNTSSLFNNTYCPNNPNATYNATENSTITIQCKIKQIVNMWQEVGRAMYPPPIKGPITCASNITGLLLTRDGGANSNNTETFRPGGGDMKDNWRSELYKYKVVEIKPLGIAPTKAKRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: LWVTVYYGVPVWKEAKTTLFCASDAKAYDQEVHNIWATHACVPTDPNPQELVLANVTENFNMWDNDMVDQMHQDIISLWDQSLKPCVKLTPLCVTLNCTKE
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MSEEKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPEVVEFLYYKQGGWLSVLFGNDERKLNGHYAVYYVLSMEKGTKCWITVRVEVDANKPEYPSVTPRVPAAVWGEREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKDSMDYRQRPAPTTDAETYEFINELGDKKNNVVPIGPLHVTSDEPGHFRLFVDGENIIDADYRLFYVHRGMEKLAETRMGYNEVTFLSDRVCGICGFAHSTAYTTSVENAMGIQVPERAQMIRAILLEVERLHSHLLNLGLACHFTGFDSGFMQFFRVRETSMKMAEILTGARKTYGLNLIGGIRRDLLKDDMIQTRQLAQQMRREVQELVDVLLSTPNMEQRTVGIGRLDPEIARDFSNVGPMVRASGHARDTRADHPFVGYGLLPMEVHSEQGCDVISRLKVRINEVYTALNMIDYGLDNLPGGPLMVEGFTYIPHRFALGFAEAPRGDDIHWSMTGDNQKLYRWRCRAATYANWPTLRYMLRGNTVSDAPLIIGSLDPCYSCTDRMTVVDVRKKKSKVVPYKELERYSIERKNSPLK

Annotated regions:
phrase: IPHRFALGFAEAPRGDDIHWSMTGDNQKLYRWRCRAATYANWPTLRYMLRGNTVSDAPLIIGSLDPCYSCTD
type: DOMAIN
name: NADH_Q_OxRdtase_suD
description: NADH-quinone oxidoreductase, subunit D

phrase: GFDSGFMQFFRVRETSMKMAEILTGARKTYGLNLIGGIRRDLLKDDMIQTRQLAQQMRREVQELVDVLLSTPNMEQRTVGIGRLDPEIARDFSNVGPMVRASGHARDTRADHPFVGYGLLPMEVHSEQGCDVISRLKVRINEVYTALNMIDYGLDNLPGGPLMVEGFTY
type: DOMAIN
name: NADH_Q_OxRdtase_suD
description: NADH-quinone oxidoreductase, subunit D

phrase: VHRGMEKLAET
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_49kDa_CS
description: NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site

phrase: VTVKVNYLPEVVEFLYYKQGGWLSVLFGNDERKLNGHYAVYYVLSMEKGTKCWITVRVEVDANKPEYPSVTPRVPAAVWGEREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKD
type: DOMAIN
name: NADH_UbQ_OxRdtase_30kDa_su
description: NADH:ubiquinone oxidoreductase, 30kDa subunit
Protein sequence:
MNLKILGIDPGSRNCGYAIIEADKGKNILIEAGLIKIKPSTLQYQITELCEGLDLIFKNHSFDEVAIEDIFFAYNPKTVLKLAQFRGALSLKILQIHGDFAEYTPLQVKKAVTGKAKATKEQVAFMVKRLLGLSKDIKPLDITDAIAVALTHAANLRVRV

Annotated regions:
phrase: GKAKATKEQVAFMVKRLLGLSKDIKPLDITDAIAV
type: BINDING_SITE
name: X-over_junc_endoDNase_Mg_BS
description: Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site
Protein sequence:
MTITLYNTLTRKKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRNYLEYKGYDVQYVSNFTDVDDKLIKAANELGEDVPTVSERFIKAYFEDVGALGCRKADLHPRVMENMDAIIEFVSELIKKGYAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVGEKKEDALDFALWKAAKDGEISWDSPWGKGRPGWHIECSAMVKKYLGDEIDIHAGGQDLTFPHHENEIAQSEALTGKTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDIIKQYDPQLLRFFMLSVHYRHPINYSEELLEKTKNAFNRLKTAYSNLNHRLISSTNLTDNDEEWLAKIEEHRTAFEEAMDDDFNTANAISVWFDLAKVANYYMQEDNTADHVIKAFISMFDRIGSVLGLTLGEEELVDEEIEELIEKRNEARRNRDFALSDQIRDQLKSMNIILEDTAQGTRWKRGE

Annotated regions:
phrase: TLYNTLTRKKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRNYLEYKGYDVQYVSNFTDVDDKLIKAANELGEDVPTVSERFIKAYFEDVGALGCRKADLHPRVMENMDAIIEFVSELIKKGYAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVGEKKEDALDFALWKAAKDGEISWDSPWGKGRPGWHIECSAMVKKYLGDEIDIHAGGQDLTFPHHENEIAQSEALTGKTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDIIKQYDPQLLRFFMLSVHYRHPINY
type: DOMAIN
name: tRNA-synt_1_cat_dom
description: tRNA synthetases class I, catalytic domain

phrase: AFEEAMDDDFNTANAISVWFDLAKVANYYMQEDNTADHVIKAFISMFDRIGSVLGLT
type: DOMAIN
name: Cys-tRNA-synt_Ia_DALR
description: Cysteinyl-tRNA synthetase, class Ia, DALR

phrase: AFEEAMDDDFNTANAISVWFDLAKVANYYMQEDNTADHVIKAFISMFDRIGSVLGLTLGEEEL
type: DOMAIN
name: Cys-tRNA-synt_Ia_DALR
description: Cysteinyl-tRNA synthetase, class Ia, DALR

phrase: FVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRNYLEYKGYDVQYVSNFTDVDDKLIKAANELGEDVPTVSERFIKAYFEDVGALGCRKADLHPRVMENMDAIIEFVSELIKKGYAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVGEKKEDALDFALWKAAKDGEISWDSPWGKGRPGWHIECSAMVKKYLGDEIDIHAGGQDLTFPHHENEIAQSEALTGKTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDIIKQYDPQLLRFFMLSVHYRHPINYSEELLEKT
type: DOMAIN
name: tRNA-synt_1_cat_dom
description: tRNA synthetases class I, catalytic domain
Protein sequence:
MTYSKNVFIPVTNICRNQCGYCGFRREPGQPGARLMKPEEVISVLENGVRAGCTEALFTFGERAEEVPGYGEMLEEIGYSSTLEYLVFLCETAIDIGILPHTNAGIMTRSELEALKPLNASMGLMLESTAVLAAHKDCPGKIPERRLETIREAGKLKIPYTTGLLIGIGESRDDRIESLEAIAALHREYGHIQEVIIQNFAPKPGTEMENFPEPAVEEMMDSVELAARILPGDVAVQVAPNLIDPKSLIAKGVTDLGGISPLTIDWINPEAEWPDVKNLQKKLGDIPLKERLPVYPPYVKKGWYSERIGSLIKRLSDNSGYRKQPGTENAEDSEK

Annotated regions:
phrase: MTYSKNVFIPVTNICRNQCGYCGFRREPGQPGARLMKPEEVISVLENGVRAGCTEALFTFGERAEEVPGYGEMLEEIGYSSTLEYLVFLCETAIDIGILPHTNAGIMTRSELEALKPLNASMGLMLESTAVLAAHKDCPGKIPERRLETIREAGKLKIPYTTGLLIGIGESRDDRIESLEAIAALHREYGHIQEVIIQNFAPKPGTEMENFPEPAVEEMMDSVELAARILPGDVAVQVAPNLIDPKSLIAKGVTDLGGISPLTIDWINPEAEWPDVKNLQKKLGDIPLKERLPVYPPYVKKGWYSERIGSLIKRLSDN
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: MTYSKNVFIPVTNICRNQCGYCGFRREPGQPGARLMKPEEVISVLENGVRAGCTEALFTFGERAEEVPGYGEMLEEIGYSSTLEYLVFLCETAIDIGILPHTNAGIMTRSELEALKPLNASMGLMLESTAVLAAHKDCPGKIPERRLETIREAGKLKIPYTTGLLIGIGESRDDRIESLEAIAALHREYGHIQEVIIQNFAPKPGTEMENFPEPAVEEMMDSVELAARILPGDVAVQVAPNLIDP
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: IPVTNICRNQCGYCGFRREPGQPGARLMKPEEVISVLENGVRAGCTEALFTFGERAEEVPGYGEMLEEIGYSSTLEYLVFLCETAIDIGILPHTNAGIMTRSELEALKPLNASMGLMLESTAVLAAHKDCPGKIPERRLETIREAGKLKIPYTTGLLIGIGESRDDRIESLE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: KNVFIPVTNICRNQCGYCGFRREPGQPGARLMKPEEVISVLENGVRAGCTEALFTFGERAEEVPGYGEMLEEIGYSSTLEYLVFLCETAIDIGILPHTNAGIMTRSELEALKPLNASMGLMLESTAVLAAHKDCPGKIPERRLETIREAGKLKIPYTTGLLIGIGESRDDRIESLEAIAALHREYGHIQEVIIQNFAPKPGTEMENFPEPAVEEMMDSVELAA
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain
Protein sequence:
MSSKQATSPFACTVDGEETMTQDLTSREKEEGSDQHPASHLPLHPIMHNKPHSEELPTLVSTIQQDADWDSVLSSQQRMESENNKLCSLYSFRNTSTSPHKPDEGSREREIMNSVTFGTPERRKGSLADVVDTLKQKKLEEMTRTEQEDSSCMEKLLSKDWKEKMERLNTSELLGEIKGTPESLAEKERQLSTMITQLISLREQLLAAHDEQKKLAASQIEKQRQQMDLARQQQEQIARQQQQLLQQQHKINLLQQQIQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPGITYKPGDNYPVQFIPSTMAAAAASGLSPLQLQKGHVSHPQINPRLKGISDRLGRNLDPYEHGGGHSYNHKQIEQLYAAQLASMQVSPGAKMPSTPQPPNSAGAVSPTGIKNEKRGTSPVTQVKDETTAQPLNLSSRPKTAEPVKSPTSPTQSLFPASKTSPVNLPNKSSIPSPIGGSLGRGSSLDILSSLNSPALFGDQDTVMKAIQEARKMREQIQREQQQQPHGVDGKLSSMNSMGLSNCRNEKERTRFENLGPQLTGKSSEDGKLGPGVIDLTRPEDAEGSKAMNGSAAKLQQYYCWPTGGATVAEARVYRDARGRASSEPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYKYKPRPKRTCIVDGKKLRIGEYKQLMRSRRQEMRQFFTVGQQPQIPITTGTGVVYPGAITMATTTPSPQMTSDCSSTSASPEPSLPVIQSTYGMKMDGASLAGNDMINGEDEMEAYDDYEDDPKSDYSSENEAPEPVSAN

Annotated regions:
phrase: HIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNYK
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain

phrase: IKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNY
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain

phrase: IKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMSNQEKQPYYEEQARLSKIHLEKYPNY
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain