nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSRGTIYTESTMDFQKVRKIQFGLLDPKEIQAMSVVQVENEKIYDNGIPTDGGINDLRMGTMEKAMRCSTCQGDSKECPGHFGHIELAQPVFHIGFIDLVKKILKCVCFNCNKLLITDKHDKYSALKRVKDPKLKLNKVYKVCKDIKVCGKADRKSETYTEGSGQKQPRLRKTGLKIKAEFPIDEDDPSTNDNKRDLSASECLKILGRISPDDCKFLGFDMVLARPEWLIISRLPVAPPPVRPSVCMGSNIRQEDDLTHQYQQILKANNQLRKHLSTANHIINENYQLLQFYCATLIDNEQAGQMVSRHKSGGKAIKAIRARLKGKEGRLRGNLMGKRVDFSARTVITCDPTLDLDQLGVPRSIAENITIPEVVTPQNIDEMRKLVINGPNKWPGAKYIKGEGGKMIDLSYAKTTETFIDYGYVIERHLKNDDFVLFNRQPSLHKMSIMGHRVKVLPYSTFRLNLSVTAPYNADFDGS

Annotated regions:
phrase: QKVRKIQFGLLDPKEIQAMSVVQVENEKIYDNGIPTDGGINDLRMGTMEKAMRCSTCQGDSKECPGHFGHIELAQPVFHIGFIDLVKKILKCVCFNCNKLLITDKHDKYSALKRVKDPKLKLNKVYKVCKDIKVCGKADRKSETYTEGSGQKQPRLRKTGLKIKAEFPIDEDDPSTNDNKRDLSASECLKILGRISPDDCKFLGFDMVLARPEWLIISRLPVAPPPVRPSVCMGSNIRQEDDLTHQYQQILKANNQLRKHLSTANHIINENYQLLQFYCATLIDNEQAGQMVSRHKSGGKAIKAIRARLKGKEGRLRGN
type: DOMAIN
name: RNA_pol_Rpb1_1
description: RNA polymerase Rpb1, domain 1

phrase: EWLIISRLPVAPPPVRPSVCMGSNIRQEDDLTHQYQQILKANNQLRKHLSTANHIINENYQLLQFYCATLIDNEQAGQMVSRHKSGGKAIKAIRARLKGKEGRLRGNLMGKRVDFSARTVITCDPTLDLDQLGVPRSIAENITIPEVVTPQNIDEMRKLVINGPNKWPGAKYIKGEGGKMIDLSYAKTTETFIDYGYVIERHLKNDDFVLFNRQPSLHKMSIMGHRVKVLPYSTFRLNLSVTAPYNADFDG
type: DOMAIN
name: RNA_pol_N
description: RNA polymerase, N-terminal

phrase: GKRVDFSARTVITCDPTLDLDQLGVPRSIAENITIPEVVTPQNIDEMRKLVINGPNKWPGAKYIKGEGGKMIDLSYAKTTETFIDYGYVIERHLKNDDFVLFNRQPSLHKMSIMGHRVKVLPYSTFRLNLSVTAPYNADFD
type: DOMAIN
name: RNA_pol_asu
description: RNA polymerase, alpha subunit
Protein sequence:
MGRGKIEIKRIENSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPACSLRELIEQYQHATNSHFEEINHDQQILLEMTRMKNEMEKLETGIRRYTGDDLSSLTLDDVSDLEQQLEYSVSKVRARKHQLLNQQLDNLRRKEQILEDQNTFLYRMINENQQAALTGEVKLGEMAPLAMLQPPPAFAHSATAYYGGESSSSGTALQLMSAAPQLHADDLGFRLQPTQPNLQDPAAPCGGLHGHGLQL

Annotated regions:
phrase: RIENSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFE
type: DOMAIN
name: TF_MADSbox
description: Transcription factor, MADS-box

phrase: RGKIEIKRIENSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFE
type: DOMAIN
name: TF_MADSbox
description: Transcription factor, MADS-box

phrase: MGRGKIEIKRIENSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCS
type: DOMAIN
name: TF_MADSbox
description: Transcription factor, MADS-box

phrase: EEINHDQQILLEMTRMKNEMEKLETGIRRYTGDDLSSLTLDDVSDLEQQLEYSVSKVRARKHQLLNQQLDNLRRKEQILEDQNTFLYRM
type: DOMAIN
name: TF_Kbox
description: Transcription factor, K-box

phrase: RGKIEIKRIENSTNRQVTFS
type: DOMAIN
name: TF_MADSbox
description: Transcription factor, MADS-box

phrase: KRRGGLLKKANELAV
type: DOMAIN
name: TF_MADSbox
description: Transcription factor, MADS-box

phrase: LCDARVGVVIFSSTGKMFEYC
type: DOMAIN
name: TF_MADSbox
description: Transcription factor, MADS-box

phrase: DQQILLEMTRMKNEMEKLETGIRRYTGDDLSSLTLDDVSDLEQQLEYSVSKVRARKHQLLNQQLDNLRRKEQILEDQNTFLYRMINENQQ
type: DOMAIN
name: TF_Kbox
description: Transcription factor, K-box

phrase: GRGKIEIKRIENSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPACSLRELIEQYQHATNS
type: DOMAIN
name: MEF2-like_N
description: MADS MEF2-like, N-terminal

phrase: MGRGKIEIKRIENSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSP
type: DOMAIN
name: TF_MADSbox
description: Transcription factor, MADS-box
Protein sequence:
MENRWQVMIVWQVDRMRIRTWKSLVKHHMYVSKQAKRWWYRHHYECPNPRISSEVHIPLGEAKLVVKTYWGLHTGEREWHLGQGVSIEWRKRRYSTQVDPGLADQLIHTHYFDCFADSAIRQAILGHRVISRCNYPAGHNKVGSLQYLALTALLAPKKIKPPLPSVKKLTEDRWNKPQRTKGHRESHTMNGH

Annotated regions:
Protein sequence:
MAPPTAAPEPNTVPETSPTGHRMFSRIRLATPTDVPFIHKLIHQMAVFERLTHLFVATESGLASTLFNSRPFQAVTVFLLEISPSPFPTTHDASSPDFTPFLETHKVDLPIEDPDREKFLPDKLNDVVVAGFVLFFPNYPSFLAKQGFYIEDIFMREPYRRKGFGKLLLTAVAKQAVKLGVGRVEWIVIDWNVNAINFYEQMGAQVFKEWRLCRLTGDALQAIDKLNI

Annotated regions:
phrase: VFLLEISPSPFPTTHDASSPDFTPFLETHKVDLPIEDPDREKFLPDKLNDVVVAGFVLFFPNYPSFLAKQGFYIEDIFMREPYRRKGFGKLLLTAVAKQAVKLGVGRVEWIVIDWNVNAINFYEQMGAQVFKEWRLCRLTGDALQAIDKL
type: DOMAIN
name: GNAT_dom
description: GNAT domain

phrase: HDASSPDFTPFLETHKVDLPIEDPDREKFLPDKLNDVVVAGFVLFFPNYPSFLAKQGFYIEDIFMREPYRRKGFGKLLLTAVAKQAVKLGVGRVEWIVIDWNVNAINFYEQM
type: DOMAIN
name: GNAT_dom
description: GNAT domain
Protein sequence:
MKRFPTIKIYDTLSGQVVDLVPVKEGEIKIYLCGPTVYNLLHIGNARPIIIFDAFRRFLEYIGYKVTLVQNFTDIDDKIIEQAKKENLPFEEVGKRYIIEYWRDMTALKARAFNFHPKTTNYVDEIISYIKELEEKGYAYKAENGDVYFEVEKFSRYGELSHRKVEDLKVGVRVEVSEYKKNPLDFALWKASKEGEPFWESPWGKGRPGWHIECSVMSSEILGDTFDIHAGGNDLIFPHHENERAQAIAKSGKDFAKYWMHNGMIRMAQDKMSKSLGNVWYLRDLLKKFDSDVLKIFILSKHYRIPIDVSEELLRNQEVSVNRVKESLNEAETFFNGKVPCPQKMNYFKEQEEYLISSLSNDFDTPSVVARIFELSRDLNKALNSRDEETIKNNYYIIRNIYGSVLGVFETNEQIQKNNVELNQLMEIILNVRSALREEKLYNLSDYIRDNLSKIGIEIKDTPEGTKWS

Annotated regions:
phrase: KIYDTLSGQVVDLVPVKEGEIKIYLCGPTVYNLLHIGNARPIIIFDAFRRFLEYIGYKVTLVQNFTDIDDKIIEQAKKENLPFEEVGKRYIIEYWRDMTALKARAFNFHPKTTNYVDEIISYIKELEEKGYAYKAENGDVYFEVEKFSRYGELSHRKVEDLKVGVRVEVSEYKKNPLDFALWKASKEGEPFWESPWGKGRPGWHIECSVMSSEILGDTFDIHAGGNDLIFPHHENERAQAIAKSGKDFAKYWMHNGMIRMAQDKMSKSLGNVWYLRDLLKKFDSDVLKIFILSKHYRIPIDV
type: DOMAIN
name: tRNA-synt_1_cat_dom
description: tRNA synthetases class I, catalytic domain

phrase: SLSNDFDTPSVVARIFELSRDLNKALNSRDEETIKNNYYIIRNIYGSVLGVF
type: DOMAIN
name: Cys-tRNA-synt_Ia_DALR
description: Cysteinyl-tRNA synthetase, class Ia, DALR

phrase: VPVKEGEIKIYLCGPTVYNLLHIGNARPIIIFDAFRRFLEYIGYKVTLVQNFTDIDDKIIEQAKKENLPFEEVGKRYIIEYWRDMTALKARAFNFHPKTTNYVDEIISYIKELEEKGYAYKAENGDVYFEVEKFSRYGELSHRKVEDLKVGVRVEVSEYKKNPLDFALWKASKEGEPFWESPWGKGRPGWHIECSVMSSEILGDTFDIHAGGNDLIFPHHENERAQAIAKSGKDFAKYWMHNGMIRMAQDKMSKSLGNVWYLRDLLKKFDSDVLKIFILSKHYRIPIDVSEELLR
type: DOMAIN
name: tRNA-synt_1_cat_dom
description: tRNA synthetases class I, catalytic domain
Protein sequence:
MLKNDRLLRALNRQPVDRTPVWLMRQAGRYLPEYRATRARAGSFLSMAKNPDIACEVTLQPLQRFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDAAAIHRLGVPDMETELRYVMDAVRVIRRELDGSVPLIGFSGSPWTLACYMIEGGGSKEYARIKAMAFNAPEVLHHLLGTVTDAVIAYLAAQRAAGAQALQVFDTWGGVLSPAMYHEFSLPYLTRIAHELERGEGAERTPLVLFGKGNGVYVADLAASGAEAVGVDWTISLADAAQRAGGRVALQGNLDPATLYGSPEAIRTEVGKTLDSYAQGNGGSREGHVFNLGHGMSPDMNPEHVGVLVEAVQRLSKR

Annotated regions:
phrase: IGFSGSPWTLACYMIE
type: DOMAIN
name: Uroporphyrinogen_deCOase
description: Uroporphyrinogen decarboxylase (URO-D)

phrase: PVWLMRQAG
type: DOMAIN
name: Uroporphyrinogen_deCOase
description: Uroporphyrinogen decarboxylase (URO-D)

phrase: KNDRLLRALNRQPVDRTPVWLMRQAGRYLPEYRATRARAGSFLSMAKNPDIACEVTLQPLQRFPLDAAILFSDILTIPDAMGLELYFVEGEGPKFRHPVRDAAAIHRLGVPDMETELRYVMDAVRVIRRELDGSVPLIGFSGSPWTLACYMIEGGGSKEYARIKAMAFNAPEVLHHLLGTVTDAVIAYLAAQRAAGAQALQVFDTWGGVLSPAMYHEFSLPYLTRIAHELERGEGAERTPLVLFGKGNGVYVADLAASGAEAVGVDWTISLADAAQRAGGRVALQGNLDPATLYGSPEAIRTEVGKTLDSYAQGNGGSREGHVFNLGHGMSPDMNPEHVGVLVEAVQ
type: DOMAIN
name: Uroporphyrinogen_deCOase
description: Uroporphyrinogen decarboxylase (URO-D)
Protein sequence:
MADSRDKKQNLVGMPRRELEAFFTEMGEKAFRASQVMKWIYHQGVDHFDHMSNLGKALRTRLAERAGIRLPEISLDQPSRDGTRKWVLRLEDDNHVEMVFIPEGDRGTLCVSSQVGCTLACSFCSTARQGFNRNLSAAEIIGQVVVAARALGLPENKGERVLTNIVLMGMGEPLMNFDEVVASMELMQDDLAFGVSKRRITLSTAGVVPRIERLREVSDVSLAVSLHAPEDALRDELVPINRKYPIAQLMAACRHYVEGKPHRRVTFEYVMLEGVNDSPEHARKLVRLLRTVPAKLNLIPFNAFPGAPYRCSSQESIDRFRDIIMAAGIITVTRKTRGEDIDAACGQLVGKVLDRTRRSERHIIFRGEVGP

Annotated regions:
phrase: SSQVGCTLACSFCSTARQGFNRNLSAAEIIGQVVVAARALGLPENKGERVLTNIVLMGMGEPLMNFDEVVASMELMQDDLAFGVSKRRITLSTAGVVPRIERLREVSDVSLAVSLHAPEDALRDELVPINRKYPIAQLMAACRHYVEGKPHRRVTFEYVMLEGVNDSPEHA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: EGDRGTLCVSSQVGCTLACSFCSTARQGFNRNLSAAEIIGQVVVAARALGLPENKGERVLTNIVLMGMGEPLMNFDEVVASMELMQDDLAFGVSKRRITLSTAGVVPRIERLREVSDVSLAVSLHAPEDALRDELVPINRKYPIAQLMAACRHYVEGKPHRRVTFEYVMLEGVNDSPEHARKLVRLLRTVPAKLNLIPFNAFPGAPYRCSSQESIDRFRDIIMAAGIITVTRKTRGE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: NLVGMPRRELEAFFTEMGEKAFRASQVMKWIYHQGVDHFDHMSNLGKALRTRLAERAG
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: RDKKQNLVGMPRRELEAFFTEMGEKAFRASQVMKWIYHQGVDHFDHMSNLGKALRTRLAERAGIRLPEISLDQPSRDGTRKWVLRLEDDNHVEMVFIPEGDRGTLCVSSQVGCTLACSFCSTARQGFNRNLSAAEIIGQVVVAARALGLPENKGERVLTNIVLMGMGEPLMNFDEVVASMELMQDDLAFGVSKRRITLSTAGVVPRIERLREVSDVSLAVSLHAPEDALRDELVPINRKYPIAQLMAACRHYVEGKPHRRVTFEYVMLEGVNDSPEHARKLVRLLRTVPAKLNLIPFNAFPGAPYRCSSQESIDRFRDIIMAAGIITVTRKTRGEDIDAACGQLVGKVLDRTRRS
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MAVSLWQQCIARLQDELSAQQFSMWIRPLQAEMEGDTLVIYAPNRFVLDWVRDKYLNIINQFFTEQMGADAPKLRFDIGSRPSAKPVVQATAAIRPKPAASKAVEKPTFNAPQAEPAITANHRSNINPTYQFDNFVEGKSNQLGKAAALQVSENPGGAYNPLFLYGGTGLGKTHLLHAVGNGIIKNKPDAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALFIDDIQFFANKDRSQEEFFHTFNALLEGNHQIILTSDKYPKEIDGVEDRLKSRFGWGLTVAIEPPELETRVAILMRKAQESGINLPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKMADMLSKRRSRSVARPRQMAMALSKELTNQSLPEIGDAFGGRDHTTVLHACRKIAQLREESHDIKEDYANLIRTLSS

Annotated regions:
phrase: TIDNIQKTVAEYYKIKMADMLSKRRSRSVARPRQMAMALSKELTNQSLPEIGDAFGGRDHTTVLHACRK
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: NPTYQFDNFVEGKSNQLGKAAALQVSENPGGAYNPLFLYGGTGLGKTHLLHAVGNGIIKNKPDAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALFIDDIQFFANKDRSQEEFFHTFNALLEGNHQIILTSDKYPKEIDGVEDRLKSRFGWGLT
type: DOMAIN
name: DnaA_dom
description: Chromosomal replication initiator protein DnaA, ATPAse domain

phrase: AYNPLFLYGGTGLGKTHLLHAVGNGIIKNKPDAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALFIDDIQFFANKDRSQEEFFHTFNALLEGNHQIILTSDKYPKEIDGVEDRLKSRFGWGLTVAIEPPELETRVAILMRKAQESGINLPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFVREALRDLLALQEKLVTI
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: SLWQQCIARLQDELSAQQFSMWIRPLQAEMEGDTLVIYAPNRFVLDWVRDKYLNIINQFF
type: DOMAIN
name: DnaA_N_dom
description: DnaA N-terminal domain

phrase: IDNIQKTVAEYYKIKMADMLSKRRSRSVARPRQMAMALSKELTNQSLPEIGDAFGGRDHTTVLHACRK
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: IDNIQKTVAEYYKIKMADMLSKRRSRSVARPRQMAMALSKELTNQSLPEIGDAFGGRDHTTVLHACRKIAQLREESHDIKEDYANLIRT
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: TRVAILMRKAQESGINLPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFVREA
type: DOMAIN
name: Hda_lid
description: Hda, lid domain

phrase: IGDAFGGRDHTTVLHACRK
type: CONSERVED_SITE
name: Chromosome_initiator_DnaA_CS
description: Chromosomal replication control, initiator DnaA, conserved site
Protein sequence:
MKTLLLTLVVVTIVCLDLGYTMKCKICNFDTCRAGELKVCASGEKYCFKESWREARGTRIERGCAATCPKGSVYGLYVLCCTTDDCN

Annotated regions:
phrase: GCAATCPKGSVYGLYVLCCTT
type: CONSERVED_SITE
name: Snake_toxin_con_site
description: Snake toxin, conserved site
Protein sequence:
MAAVSSVASLRGADYENGLRGVAGPSDGGQDPGEDDPMGRGTLDLEMELLEQGRRSRRVGGRTTPGRRSGGRGGSGGGGAGGLEELEDEELEEEEPGELTGDQTIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFCDKESVRTSLALDESLFRGRQIKVVPKRTNRPGISTTDRGFPRARYRARASSYSSRSRFYSGYTPRPRGRVYRGRARATSWYTPY

Annotated regions:
phrase: RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFCDKESVRTSLALDESLFRGRQIKVVPKR
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: IYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFCDKESVRTSLALDESLFRGRQI
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: SIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFCDKESVRTSLALDESLFRGRQIKV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain
Protein sequence:
MAAKMAKNVDKPLFTATFNVQASSADYATFIAGIRNKLRNPAHFSHNRPVLPPVEPNVPPSRWFHVVLKASPTSAGLTLAIRADNIYLEGFKSSDGTWWELTPGLIPGATYVGFGGTYRDLLGDTDKLTNVALGRQQLADAVTALHGRTKADKPSGPKQQQAREAVTTLLLMVNEATRFQTVSGFVAGLLHPKAVEKKSGKIGNEMKAQVNGWQDLSAALLKTDVKPPPGKSPAKFAPIEKMGVRTAVQAANTLGILLFVEVPGGLTVAKALELFHASGGK

Annotated regions:
phrase: LLMVNEATRFQTVSGF
type: CONSERVED_SITE
name: Ribosome_inactivat_prot_CS
description: Ribosome-inactivating protein conserved site
Protein sequence:
MHTDLDTDMDMDTETVALCSSSSRQASPLGTPTPEADTTLLKQKPEKLLAELDLSGPPPAPGVPRRRGSMPVPYKHQLRRAQAVDELDWPPQASPSGSSDSLGSGEAALTQKDGVFKVMLVGESGVGKSTLAGTFGGLQGDHAHEMENSEDTYERRIMVDKEEVTLIVYDIWEQGDAGGWLQDHCLQTGDAFLIVFSVTDRRGFSKVPETLLRLRAGRPHHDLPVILVGNKSDLARSREVSLEEGRHLAGTLSCKHIETSAALHHNTRELFEGAVRQIRLRRGRGHAGGQRPEPSSPDGPAPPTRRESLTKKAKRFLANLVPRNAKFFKQRSRSCHDLSVL

Annotated regions:
phrase: VMLVGESGVGKST
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_1
description: Sigma-54 interaction domain, ATP-binding site 1
Protein sequence:
MATVKWADASEPQRGRQGRIPYSLYSPLLVDSEQPWKVIPRNLVPINKKDKNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVVEEPDSRAPSRSQSRSQSRGRGESKPQSRNPSSDRNHNSQDDIMKAVAAALKSLGFDKPQEKDKKSAKTGTPKPSRNQSPASSQTSAKSLARSQSSETKEQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFTREMQQHPLLNPSALEFNPSQTSPATAEPVRDEVSIETDIIDEVN

Annotated regions:
phrase: IPYSLYSPLLVDSEQPWKVIPRNLVPINKKDKNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVT
type: DOMAIN
name: N_prot_N_CoV
description: Nucleocapsid (N) protein, N-terminal domain, coronavirus

phrase: ETKEQKHEMQKPRWKRQPNDDVTSNVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELNAFTREMQQH
type: DOMAIN
name: N_prot_C_CoV
description: Nucleocapsid (N) protein, C-terminal domain, coronavirus

phrase: IPYSLYSPLLVDSEQPWKVIPRNLVPINKKDKNKLIGYWNVQKRFRTRKGKRVDLSPKLHFYYLGTGPHKDAKFRERVEGVVWVAVDGAKTEPTGYGVRRKNSEPEIPHFNQKLPNGVTVV
type: DOMAIN
name: N_prot_N_CoV
description: Nucleocapsid (N) protein, N-terminal domain, coronavirus

phrase: NVTQCFGPRDLDHNFGSAGVVANGVKAKGYPQFAELVPSTAAMLFDSHIVSKESGNTVVLTFTTRVTVPKDHPHLGKFLEELN
type: DOMAIN
name: N_prot_C_CoV
description: Nucleocapsid (N) protein, C-terminal domain, coronavirus
Protein sequence:
MRVAALISGGKDSCYNMMQCVAAGHQIVALANLRPAENQVGSDELDSYMYQTVGHHAIDLYAEAMALPLYRRTIRGKSVDTGPVYTKCEGDEVEDLYELLKLVKEKEEVEGISVGAILSDYQRVRVENVCKRLNLQPLAYLWQRNQEDLLQEMISSNIQAIIIKVAALGLDPDKHLGKPLDQMEPYLLELSKKYGVHVCGEGGEYETFTLDCPLFKKKIIVDSSEVVTHSADAFAPVAYLRFLELHLEDKVSPVPDNCRTSNDIHNS

Annotated regions:
phrase: MRVAALISGGKDSCYNMMQCVAAGHQIVALANLRPAENQVGSDELDSYMYQTVGHHAIDLYAEAMALPLYRRTIRGKSVDTGPVYTKCEGDEVEDLYELLKLVKEKEEVEGISVGAILSDYQRVRVENVCKRLNLQPLAYLWQRNQEDLLQEMISSNIQAIIIKVAALGLDPDKHLGKPLDQMEPYLLELSKKYGVHVCGEGGEYETFTLDCPLFKKKIIVDSSEVVTHSADAFA
type: DOMAIN
name: Diphthami_syn_dom
description: Diphthamide synthase domain

phrase: RVAALISGGKDSCYNMMQCVAAGHQIVALANLRPAENQVGSDELDSYMYQTVGHHAIDLYAEAMALPLYRRTIRGKSVDTGPVYTKCEGDEVEDLYELLKLVKEKEEVEGISVGAILSDYQRVRVENVCKRLNLQPLAYLWQRNQEDLLQEMISSNIQAIIIKVAALGLDPDKHLGKPLDQMEPYLLELSKKYGVHVCGEGGEYETFTLDCPLFKKK
type: DOMAIN
name: Diphthami_syn_dom
description: Diphthamide synthase domain

phrase: MRVAALISGGKDSCYNMMQCVAAGHQIVALANLRPAENQVGSDELDSYMYQTVGHHAIDLYAEAMALPLYRRTIRGKSVDTGPVYTKCEGDEVEDLYELLKLVKEKEEVEGISVGAILSDYQRVRVENVCKRLNLQPLAYLWQRNQEDLLQEMISSNIQAIIIKVAALGLDPDKHLGKPLDQMEPYLLELSKKYGVHVCGEGGEYETFTLDCPLFKKKIIVDSSEVVTHSADA
type: DOMAIN
name: Diphthami_syn_dom
description: Diphthamide synthase domain
Protein sequence:
MAQVAVSTLPVEEESSSETRMVVTFLVSALESMCKELAKSKAEVACIAVYETDVFVVGTERGCAFVNARTDFQKDFAKYCVAEGLCEVKPPCPVNGMQVHSGETEILRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKWILENKAGISFIINRPFLGPESQLGGPGMVTDAERSIVSPSESCGPINVKTEPMEDSGISLKAEAVSVKKESEDPNYYQYNMQGSHPSSTSNEVIEMELPMEDSTPLVPSEEPNEDPEAEVKIEGNTNSSSVTNSAAGVEDLNIVQVTVPDNEKERLSSIEKIKQLREQVNDLFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIRPLPGLELSNVGKRKIDQEGRVFQEKWERAYFFVEVQNIPTCLICKQSMSVSKEYNLRRHYQTNHSKHYDQYTERMRDEKLHELKKGLRKYLLGSSDTECPEQKQVFANPSPTQKSPVQPVEDLAGNLWEKLREKIRSFVAYSIAIDEITDINNTTQLAIFIRGVDENFDVSEELLDTVPMTGTKSGNEIFLRVEKSLKKFCINWSRLVSVASTGTPAMVDANNGLVTKLKSRVATFCKGAELKSICCIIHPESLCAQKLKMDHVMDVVVKSVNWICSRGLNHSEFTTLLYELDSQYGSLLYYTEIKWLSRGLVLKRFFESLEEIDSFMSSRGKPLPQLSSIDWIRDLAFLVDMTMHLNALNISLQGHSQIVTQMYDLIRAFLAKLCLWETHLTRNNLAHFPTLKLVSRNESDGLNYIPKIAELKTEFQKRLSDFKLYESELTLFSSPFSTKIDSVHEELQMEVIDLQCNTVLKTKYDKVGIPEFYKYLWGSYPKYKHHCAKILSMFGSTYICEQLFSIMKLSKTKYCSQLKDSQWDSVLHIAT

Annotated regions:
phrase: LRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKWILENKAGISFIIN
type: REPEAT
name: GTF2I
description: GTF2I-like repeat

phrase: LREQVNDLFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTV
type: REPEAT
name: GTF2I
description: GTF2I-like repeat

phrase: QVHSGETEILRKAVEDYFCFCYGKALGTTVMVPVPYEKMLRDQSAVVVQGLPEGVAFQHPENYDLATLKWILENKAGISFIINRPFLGPESQLG
type: REPEAT
name: GTF2I
description: GTF2I-like repeat

phrase: LSSIEKIKQLREQVNDLFSRKFGEAIGVDFPVKVPYRKITFNPGCVVIDGMPPGVVFKAPGYLEISSMRRILEAAEFIKFTVIRPLPGLELSNV
type: REPEAT
name: GTF2I
description: GTF2I-like repeat
Protein sequence:
MAREFSRTDRVAQQVHKEVASILQNEYKHRVGDMPLITVSDVDVSRDLAHAKIFVTIYNSTEEEGKVQIKQLAEYKKFIRSILAKRLRMRSVPDLHFFEDKSIIEGMRISNLVSQTIAKDESKRDQDDSQEQE

Annotated regions:
phrase: IRSILAKRLRMRSVPDLHFFE
type: CONSERVED_SITE
name: Ribosome-bd_factorA_CS
description: Ribosome-binding factor A, conserved site
Protein sequence:
MATAEVLNIGKKLYEGKTKEVYELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKITSCIFQLLQEAGIKTAFTRKCGETAFIAPQCEMIPIEWVCRRIATGSFLKRNPGVKEGYKFYPPKVELFFKDDANNDPQWSEEQLIAAKFCFAGLLIGQTEVDIMSHATQAIFEILEKSWLPQNCTLVDMKIEFGVDVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQSYRDLKEVTPEGLQMVKKNFEWVAERVELLLKSESQCRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFVAVAGRSNGLGPVMSGNTAYPVISCPPLTPDWGVQDVWSSLRLPSGLGCSTVLSPEGSAQFAAQIFGLSNHLVWSKLRASILNTWISLKQADKKIRECNL

Annotated regions:
phrase: KLYEGKTKEVYELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKITSCIFQLLQEAGIKTAFTRKCGETAFIAPQCEMIPIEWVCRRIATGSFLKRNPGVKEGYKFYPPKVELFFKDDANNDPQWSEEQLIAAKFCFAGLLIGQTEVDIMSHATQAIFEILEKSWLPQNCTLVDMKIEFGVDVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQSYRDLKEV
type: DOMAIN
name: SAICAR_synt/ADE2_N
description: SAICAR synthetase/ADE2, N-terminal

phrase: RVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFVAVAGRSNGLGPVMSGNTAYPVISCPPLTPDWGVQDVWSSLRLPSGLGCSTVLSPEGSAQFAAQIFGLSNHLVWSKLR
type: DOMAIN
name: PurE_dom
description: PurE domain

phrase: CRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFVAVAGRSNGLGPVMSGNTAYPVISCPPLTPDWGVQDVWSSLRLPSGLGCSTVLSPEGSAQFAAQIFGLSNHLVWSKLRASILNTWISLKQADKKI
type: DOMAIN
name: PurE_classII
description: Class II PurE

phrase: LVDMKIEF
type: CONSERVED_SITE
name: SAICAR_synthetase_CS
description: SAICAR synthetase, conserved site

phrase: GKKLYEGKTKEVYELLDSPGKVLLQSKDQITAGNAARKNHLEGKAAISNKITSCIFQLLQEAGIKTAFTRKCGETAFIAPQCEMIPIEWVCRRIATGSFLKRNPGVKEGYKFYPPKVELFFKDDANNDPQWSEEQLIAAKFCFAGLLIGQTEVDIMSHATQAIFEILEKSWLPQNCTLVDMKIEFGVDVTTKEIVLADVIDNDSWRLWPSGDRSQQKDKQSYRDLKEVTPEGLQMVKKNFEWVAERVE
type: DOMAIN
name: SAICAR_synt/ADE2_N
description: SAICAR synthetase/ADE2, N-terminal

phrase: VVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFVAVAGRSNGLGPVMSGNTAYPVISCPPLTPDWGVQDVWSSLRLPSGLGCSTVLSPEGSAQFAAQIFGLSNHLVWSKLRASILNTWISLKQADKK
type: DOMAIN
name: PurE_dom
description: PurE domain

phrase: CRVVVLMGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGPDETLRIKAEYEGDGIPTVFVAVAGRSNGLGPVMSGNTAYPVISCPPLTPDWGVQDVWSSLRLPSGLGCSTVLSPEGSAQFAAQIFGLSNHLVWSKLRASILNTWIS
type: DOMAIN
name: PurE_dom
description: PurE domain

phrase: MIPIEWVCRRIATG
type: CONSERVED_SITE
name: SAICAR_synthetase_CS
description: SAICAR synthetase, conserved site
Protein sequence:
MKFLFDLFPVILFFITFKIYGIYAATAVAIGATFAQIGWVWFRHGKVDTMLWVSLVLIVVFGSATLILQDETFIKWKPSVLYWLFAAALLIAQAIFKKNFIRTMMKEQLTLPEPVWARVNASWAAFFAFMGAANLYVAFNYSTETWVNFKLFGFMGLMLVFVVLQGLMLSKYMATDEDKEA

Annotated regions:
Protein sequence:
MKYKRILLKLSGEALMGEQKYGIDSQVLIRYANEIKAIADKGVEITIVVGGGNIYRGIEAAATGIDRVQGDYMGMLATVINCMALQSALENIGLDTRLMSGIKIEQVCESFIRRRAIRHLEKGRIVMFGAGTGNPYFTTDTAASLRAIEIEAEVVLKGTRVDGVYTADPEKDPTATRYTTITFDEAYAKGLNIMDMTAFTLCKENELPIIIFDMNRPGNLLKVLEGESVGTLVKL

Annotated regions:
phrase: KRILLKLSGEALMGEQKYGIDSQVLIRYANEIKAIADKGVEITIVVGGGNIYRGIEAAATGIDRVQGDYMGMLATVINCMALQSALENIGLDTRLMSGIKIEQVCESFIRRRAIRHLEKGRIVMFGAGTGNPYFTTDTAASLRAIEIEAEVVLKGTRVDGVYTADPEKDPTATRYTTITFDEAYAKGLNIMDMTAFTLCKENELPIIIF
type: DOMAIN
name: Asp/Glu/Uridylate_kinase
description: Aspartate/glutamate/uridylate kinase
Protein sequence:
MSGAATTEGAVTRFDAALVGTEARDWFALLKPRVISLVVFTGAAGLAMAPGPINPLIAAVSILCICMASGAAGAINMWYDRDIDAVMTRTARRPIPDGRIRDDQALGFGIGLSVASVLLMWLAANALAAFILAFSIFFYAVIYTMWLKRSTPQNIVIGGAAGAFPPMIGWAATTGSLGVLPVVMFAIVFLWTPPHFWSLSLYACKDYGRAGIPMLPVVRGARHTRWQILFYTLILSAVSLVPSFLHQAGWLYTGVASLLDAGFVACAVGVLTDRQDEAGVSLTGDRPARRAFRYSLAYLFLLFCGLLADHFLIMR

Annotated regions:
phrase: NMWYDRDIDAVMTRTARRPIPD
type: CONSERVED_SITE
name: UbiA_prenylTrfase_CS
description: UbiA prenyltransferase conserved site
Protein sequence:
MGSLKADAIRSPLDALEDHGLGVLEDVLILPSGGTWNPLKGLRRGGSLLPVGVKPSSSFRFCFHGVGRLFLRALCLSVSVFLCFVLWTYWTDVMGQTQTTPLTIMIDHFKDVSQRANNLSVEVRKGQWQVFCSSEWPAFNVGWPPEGTFELPTIHRVRGIISRPKMGLPDRLPYIITCQDLVEGPPSWFKPFLAPSPLEPKPILALQGTEKKENKKSLREQSTSATDSTILPLQATGPPDVEGNQPHHYWPFATSDLYNWKAQKPKFSEKPAGLIDLLDSILFTHQPMWDNCQQLLQVLFTTEERERILNEAXKLVPGADGNPTTNQAQIDASFPLTWPQWDFNTAEGKERLRVYCQTLMGGLRMAARKPTNLAKVGNVQQGKDESPAAFLERITEAFHTYTPMDPEAPESKAAVIMAFVNQSAIDIRRKLQKIDRLGEKSLQDLLVVAKKVYNNREPPEDKQARAMAAASSKQTRDLARILLATTADSPEEXDRRLWQLVGDSRGGKGTTKGWKRRLQKDQCAYCKEIGHWARDCPKRAGGKGSKTDRVKVLELDELSDXGSRGSDPLPEPRVTLKVEGTPVDFLVDTGAQHSVLRTPQGKLASKKSWVQGATGMSQYSWTTRRTVDLGTGRVSHSFMVIPECPYPLLGRDLLTKIGAQITFRQGGPQVTDGKGHPIQVLTMKLEDEYLLHQEALPREDNIDRWLQEFPLVWAETGGGMGLAAHRTPVLVELKPGESPVRIKQYPMSQEARKGIQPHIRRLRSLGVL

Annotated regions:
phrase: EPRVTLKVEGTPVDFLVDTGAQHSVLRTPQGKLASKKSWVQGATGMSQYSWTTRRTVDLGTGRVSHSFMVIPECPYPLLGRDLLTKIGAQ
type: DOMAIN
name: Retropepsins
description: Retropepsins

phrase: GQTQTTPLTIMIDHFKDVSQRANNLSVEVRKGQWQVFCSSEWPAFNVGWPPEGTFELPTIHRVRGIISRPKMGLPDRLPYIITCQDLVEGPPSWFKPFLAPSPLEPK
type: DOMAIN
name: G_retro_matrix
description: Gamma-retroviral matrix protein

phrase: SDLYNWKAQKPKFSEKPAGLIDLLDSILFTHQPMWDNCQQLLQVLFTTEERERILNEAXKLVPGADGNPTTNQAQIDASFPLTWPQWDFNTAEGKERLRVYCQTLMGGLRMAARKPTNLAKVGNVQQGKDESPAAFLERITEAFHTYTPMDPEAPESKAAVIMAFVNQSAIDIRRKLQKIDRLGEKSLQDLLVVAKKVY
type: DOMAIN
name: Gag_P30
description: Core shell protein Gag P30

phrase: CAYCKEIGHWARDCP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: QCAYCKEIGHWARDCP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: FLVDTGAQHSV
type: ACTIVE_SITE
name: Aspartic_peptidase_AS
description: Aspartic peptidase, active site

phrase: VDFLVDTGAQHSVLRTPQGKLASKKSWVQGATGMSQYSWTTRRTVDLGTGRVSHSFMVIPECPYPLLGRD
type: DOMAIN
name: Peptidase_A2_cat
description: Peptidase A2A, retrovirus, catalytic

phrase: QCAYCKEIGHWARDCP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type
Protein sequence:
MAKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVLKSKGEQIAREHAIRFFETSAKANINIEKAFLTLAEDILQKTPVKEPDRENVDISTTGGGTGLKKCCS

Annotated regions:
phrase: FKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHANEDVERMLLGNKCDMEDKRVVLKSKGEQIAREHAIRFFETSAKANINIEKA
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain
Protein sequence:
MEVKAIHRGARISAQKTRLVADQIRGLPVDKALNVLTFSPKKAAGIVKKVVLSAIANAEHNEGADIDELKITSIYIDKAASLKRFTARAKGRGNRIEKQSCHITVTVGN

Annotated regions:
phrase: KRFTARAKGRGNRIEKQSCHITVT
type: CONSERVED_SITE
name: Ribosomal_uL22_CS
description: Large ribosomal subunit protein uL22, conserved site
Protein sequence:
MLRQFIVSTVGRRLQLPMMAQSRLASNLDKTEYTTPGEIVDYDDPPHLPVPEYPVRPDEPLEIRKQRLLYQSRKRGMLENDLLLSTFVAKHLKDFNAEQTAEYDQLINGVSNDWDIFYWATDTKPTPPQFDTEIMRLLKEHVKNHEKVQRIRQPDL

Annotated regions:
Protein sequence:
MVSAVSRQLVNRQLNRVLLRNARIAPFARATRFYSSKYAQESENAKRHKMGLLIAGVAVAGAIVFVTPPQWKKYFRAAKKVEEVAESKEDPVSEAAEEVSESVQESTEEPQQSQEKETADVGNEQAQDESASSGDSEAKKAHDEFADQNEASEKESAPMGESADADQTAKDETVAEKTGNSKSESSESDQSEQDILSSDLEETMETVSEADKELHQISDNTVLSSEEDKTPKAEELKSTSPSGNDEEPKKEDDSSKTIHSLNSEKDMEAVEEEVKQESAYNPDTGEINWDCPCLGGMAHGPCGEEFKAAFSCFVYSEAEPKGIDCVEKFQHMQDCFRRYPEHYAEQLADPADDENVDHEKNLSEGKDTGVDSTPPKDEAYLKTEKEKKIEENASPDEDTASKKD

Annotated regions:
phrase: CGEEFKAAFSCFVYSEAEPKGIDCVEKFQHMQDCFR
type: DOMAIN
name: CHCH
description: CHCH
Protein sequence:
MPVQGSQRRLLGSLNSTPTATPHLGLAANQTGAWCLEVSIPDGLFLSLGLVSLVENVLVVTAIAKNRNLHSPMYCFICCLALSDLLVSGSNMLETAVTLLLEAGALAARAAVVQQLDNVIDVITCSSMLSSLCFLGAIAVDRYISIFYALRYHSIVTLPRARRAVAAIWVASVLFSMLFIAYYDHAAVLLCLVVFFLAMLVLMAVLYVHMLARACQHAQGIARLHKRQRPAHQGFGLKGAATLTILLGIFFLCWGPFFLHLTLIVLCPQHPTCSCIFKNFNLFLALIICNAIIDPLIYAFRSQELRRTLKEVLLCSW

Annotated regions:
phrase: ENVLVVTAIAKNRNLHSPMYCFICCLALSDLLVSGSNMLETAVTLLLEAGALAARAAVVQQLDNVIDVITCSSMLSSLCFLGAIAVDRYISIFYALRYHSIVTLPRARRAVAAIWVASVLFSMLFIAYYDHAAVLLCLVVFFLAMLVLMAVLYVHMLARACQHAQGIARLHKRQRPAHQGFGLKGAATLTILLGIFFLCWGPFFLHLTLIVLCPQHPTCSCIFKNFNLFLALIICNAIIDPLI
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM