Protein sequence:
MAAFFPPSSAELRKVKRVQFGILSPDEIRNMSVARVEHPETYENGKPKAGGLLDPAMGTIDKTQRCQTCSGTMAECPGHFGHIELAKPVFHIGFIDTVLKILRCVCYHCSKLLTDTNEHSFRQALKIRNQKHRLNAVVDCCKNKKVCAIGGEEEEEHDLSKTDEELDKPVKHGGCGNVLPKITKEDLKIIVEFKDVTDESIEKKSVLSAERVLNILKRIKDEDSRAMGINPDWARADWMIATVLPVPPPPVRPSIMMDTSTRGEDDLTHKLADIVKANRELQRQEKNGAPAHIIAEATQFLQFHVATYVDNEIPGLPQAQQRSGRPLKSIRQRLKGKEGRIRGNLMGKRVDFSARTVITADPNLSIDQVGVPRSIALNLTYPETVTPFNIDKMRELIRNGPSEHPGAKYIIREDGTRFDLRFVKKVSDTHLECGYKVERHINDGDVVIFNRQPSLHKMSMMGHRIKVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQTLETRAEVIEIMMVPRQIVSPQSNRPVMGIVQDTLLGSRLFTKRDCFMEKDLVMNILMWLPSWDGKVPPPAILKPKQLWTGKQLFSLIIPDINLIRFTSTHNDKEPNECSAGDTRVIIERGELLAGILCKRSLGAANGSIIHVVMNEHGHDTCRLFIDQTQTVVNHWLINRGFTMGIGDTIADSATMAKVTLTISSAKNQVKELIIKAQNKQFECQPGKSVIETFEQKVNQVLNKARDTAGSSAQDSLSEDNNLKAMVTAGSKGSFINISQMMACVGQQNVEGKRIPFGFQSRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDVSIKYDATVRNSLGDVIQFAYGEDGIDGCFVENQSIDSLRKDNTELERMYRHQVDKPDYGDGWMDPLVIEHVRNDSLTRDTLEKEFERIKSDRSLLRNEIIPSGEANWPLPVNLRRLINNAQKLFNIDIRRVSDLNPAVVVLEIEKLVARLKIIATADTTEDDENFNRAWAEVYFNATMLFSILVRSTFASKRVLTEFRLTEKAFLWVCGEIESKFLQALAHPGEMVGALAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINIAKQVKTPSLTIYLKPHMARDMDRAKIVKSQLEYTTLANVTSATEIYYDPDPQNTIISEDAEFVNSYFELPDEEIDVHSMSPWLLRIELDRGMVTDKKLTMADITQCVVRDFGLSLNCIFSDDNAEKLILRIRMVESQETKGTDNDDDDQFLRRIESNMLSEMVLRGIKGIKKVFMRTDDKIPKVTENGGFGVREEWILDTDGVSLLEVMSHPDVDHTRTTSNDIVEIIQVLGIEAVRNALLKELRAVISFDGSYVNYRHLAILADVMTYRGHLMAITRHGINRVETGPLMRCSFEETVEILMDAAMFSETDDVKGVTENIILGQLPPLGTGSFEVFLNQDMIKNAHSIALPEPSNVSYPDTPGSQTPSYSYGDGSTTPFHNPYDAPLSPFNETFRGDFSPSAMNSPGYNANKSYGSSYQYFPQSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPSYSPSSPTFTNKYNYQPNNKKK

Annotated regions:
phrase: YSPTSP
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: YSPTSP
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: YSPSSP
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: YSPSSP
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: YSPTSP
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: YSPTSP
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: DWMIATVLPVPPPPVRPSIMMDTSTRGEDDLTHKLADIVKANRELQRQEKNGAPAHIIAEATQFLQFHVATYVDNEIPGLPQAQQRSGRPLKSIRQRLKGKEGRIRGNLMGKRVDFSARTVITADPNLSIDQVGVPRSIALNLTYPETVTPFNIDKMRELIRNGPSEHPGAKYIIREDGTRFDLRFVKKVSDTHLECGYKVERHINDGDVVIFNRQPSLHKMSMMGHRIKVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQTLETRAEVIEIMMVPRQIVSPQSNRPVMGIVQDTLLGSRLF
type: DOMAIN
name: RNA_pol_N
description: RNA polymerase, N-terminal

phrase: AQNKQFECQPGKSVIETFEQKVNQVLNKARDTAGSSAQDSLSEDNNLKAMVTAGSKGSFINISQMMACVGQQNVEGKRIPFGFQSRTLPHFTKDDYGPESRGF
type: DOMAIN
name: RNA_pol_Rpb1_4
description: RNA polymerase Rpb1, domain 4

phrase: YSPTSP
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: YSPSSP
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: YSPTSP
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: SPTSPSYSPTSPS
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: SPTSPSYSPTSPS
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: SPTSPSYSPTSPS
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: SPTSPSYSPTSPS
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: SPTSPSYSPTSPS
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: SPTSPSYSPTSPS
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: SPTSPSYSPTS
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: SPTSPSYSPTSPS
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: SPTSPSYSPTSPS
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: PQSPTYSPTSPS
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: YSPTSP
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: TTLANVTSATEIYYDPDPQNTIISEDAEFVNSYFELPDEEIDVHSMSPWLLRIELDRGMVTDKKLTMADITQCVVRDFGLSLNCIFSDDNAEKLILRIRMVESQETKGTDNDDDDQFLRRIESNMLSEMVL
type: DOMAIN
name: RNA_pol_Rpb1_7
description: RNA polymerase Rpb1, domain 7

phrase: YSPSSP
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: YSPTSP
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: QIVSPQSNRPVMGIVQDTLLGSRLFTKRDCFMEKDLVMNILMWLPSWDGKVPPPAILKPKQLWTGKQLFSLIIPDINLIRFTSTHNDKEPNECSAGDTRVIIERGELLAGILCKRSLGAANGSIIHVVMNEHGHDTCRLFIDQTQTVVNHWLINRGFTMGIGD
type: DOMAIN
name: RNA_pol_Rpb1_3
description: RNA polymerase Rpb1, domain 3

phrase: GKRVDFSARTVITADPNLSIDQVGVPRSIALNLTYPETVTPFNIDKMRELIRNGPSEHPGAKYIIREDGTRFDLRFVKKVSDTHLECGYKVERHINDGDVVIFNRQPSLHKMSMMGHRIKVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQTLETRAEVIEIMM
type: DOMAIN
name: RNA_pol_asu
description: RNA polymerase, alpha subunit

phrase: GLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDVSIKYDATVRNSLGDVIQFAYGEDGIDGCFVENQSIDSLRKDNTELERMYRHQVDKPDYGDGWMDPLVIEHVRNDSLTRDTLEKEFERIKSDRSLLRNEIIPSGEANWPLPVNLRRLINNAQKLFNIDIRRVSDLNPAVVVLEIEKLVARLKIIATADTTEDDENFNRAWAEVYFNATMLFSILVRSTFASKRVLTEFRLTEKAFLWVCGEIESKFLQALAHPGEMVGALAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINIAKQVKTPSLTIYLKPHMARDMDRAKIVKSQLEYTTLANVTSATEIYYDPDPQNTIISEDAEFVNSYFELPDEEIDVHSMSPWLLRIELDRGMVTDKKLTMADITQCVVRDFGLSLNCIFSDDNAEKLILRIRMVESQETKGTDNDDDDQFLRRIESNMLSEMVLRGIKGIKKVFMRTDDKIPKVTENGGFGVREEWILDTDGVSLLEVMSHPDVDHTRTTSNDIVEIIQVLGIEAVRNALLKELRAVISFDGSYVNYRHLAILADVMTYRGHLMAITRHGINRVET
type: DOMAIN
name: RNA_pol_Rpb1_5
description: RNA polymerase Rpb1, domain 5

phrase: IDGCFVENQSIDSLRKDNTELERMYRHQVDKPDYGDGWMDPLVIEHVRNDSLTRDTLEKEFERIKSDRSLLRNEIIPSGEANWPLPVNLRRLINNAQKLFNIDIRRVSDLNPAVVVLEIEKLVARLKIIATADTTEDDENFNRAWAEVYFNATMLFSILVRSTFASKRVLTEFRLTEKAFLWVCGEIESKFLQ
type: DOMAIN
name: RNA_pol_Rpb1_6
description: RNA polymerase Rpb1, domain 6

phrase: RKVKRVQFGILSPDEIRNMSVARVEHPETYENGKPKAGGLLDPAMGTIDKTQRCQTCSGTMAECPGHFGHIELAKPVFHIGFIDTVLKILRCVCYHCSKLLTDTNEHSFRQALKIRNQKHRLNAVVDCCKNKKVCAIGGEEEEEHDLSKTDEELDKPVKHGGCGNVLPKITKEDLKIIVEFKDVTDESIEKKSVLSAERVLNILKRIKDEDSRAMGINPDWARADWMIATVLPVPPPPVRPSIMMDTSTRGEDDLTHKLADIVKANRELQRQEKNGAPAHIIAEATQFLQFHVATYVDNEIPGLPQAQQRSGRPLKSIRQRLKGKEGRIRGN
type: DOMAIN
name: RNA_pol_Rpb1_1
description: RNA polymerase Rpb1, domain 1