nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTQYRITFEGPVILGAGLAGLTAALSATTGAAKTALVLSPTPLASGCSSAWAQGGMAAALSGDDSPALHAADTIAAGAGLCDPQAVDLLTREGPQAVRDLAALGAPFDRKADDGFVLSLEAAHSAARVARVGGDGAGAAIMAAVIAAVRATPGIEVRENARARRLLQDANGRVVGVLADVDGALVEIRSTAVILATGGVGGLYAVTTTPAQVRGEGLGLAALAGAMIADPEFVQFHPTAIDIGRDPAPLATEALRGEGAILRNADGKAFMADYHPAKELAPRDVVARALHAERAAGRGAFLDATAAVGAHFPHEFPAVFEACMSAGIDPRRQMIPVTPAVHYHMGGVATDLDGRASLPGLYAAGECASTGVQGANRLASNSLLEAAVFGARAGRAAAAEGATGGPPVSLEPLPDLPDAALQGLRKAMSRDAGVIRDADGLTRLLGEIETLEAGHGQGPILVAARLIVTAALAREESRGGHCRIDFPATDPVGVRTFVTLDGREPGLRYAAE

Annotated regions:
phrase: LVAARLIVTAALAREESRGGHCRIDFPAT
type: DOMAIN
name: Fum_Rdtase/Succ_DH_flav-like_C
description: Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal

phrase: VILGAGLAGLTAALSATTGAAKTALVLSPTPLASGCSSAWAQGGMAAALSGDDSPALHAADTIAAGAGLCDPQAVDLLTREGPQAVRDLAALGAPFDRKADDGFVLSLEAAHSAARVARVGGDGAGAAIMAAVIAAVRATPGIEVRENARARRLLQDANGRVVGVLADVDGALVEIRSTAVILATGGVGGLYAVTTTPAQVRGEGLGLAALAGAMIADPEFVQFHPTAIDIGRDPAPLATEALRGEGAILRNADGKAFMADYHPAKELAPRDVVARALHAERAAGRGAFLDATAAVGAHFPHEFPAVFEACMSAGIDPRRQMIPVTPAVHYHMGGVATDLDGRASLPGLYAAGECASTGVQGANRLASNS
type: DOMAIN
name: FAD-dep_OxRdtase_2_FAD-bd
description: FAD-dependent oxidoreductase 2, FAD-binding domain
Protein sequence:
MSLSLKRKDLMIVNMGPQHPSMHGVLRLIVTLDGEDVIDCEPILGYLHRGMEKIAENRSIIQYLPYVTRWDYLATMFTEAITVNAPEFLENIQIPQRASYIRVIMLELSRIASHLLWLGPFMADLGAQTPFFYIFRERELIYDLFEAATGMRMMHNYFRIGGVAADLPYGWMDKCLDFCDYFLQGVVEYQQLITRNPIFLERVEGVGFISGEEAVNWGLSGPMLRASGIQWDLRKIDPYESYNQFDWKVQWQKEGDSLARYLVRVGEMRESIKIIQQAVEKIPGGPYENLEARRFKKAKNPEWNDFEYRFLGKKPSPNFELSKQELYVRVEAPKGELGIYLVGDDSLFPWRWKIRPPGFINLQILPQLVKKMKLADIMTILGSIDIIMGEVDR

Annotated regions:
phrase: LHRGMEKIAEN
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_49kDa_CS
description: NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site

phrase: DLGAQTPFFYIFRERELIYDLFEAATGMRMMHNYFRIGGVAADLPYGWMDKCLDFCDYFLQGVVEYQQLITRNPIFLERVEGVGFISGEEAVNWGLSGPMLRASGIQWDLRKIDPYESYNQFDWKVQWQKEGDSLARYLVRVGEMRESIKIIQQAVEKIPGGPYENLEARRFKKAKNPEWNDFEYRFLGKKPSPNFELSKQELYVRVEAPKGELGIYLVGDDSLFPWRWKIRPPGFINLQILPQLVKKMKLADIMTILGSIDIIMGEVD
type: DOMAIN
name: NADH_Q_OxRdtase_suD
description: NADH-quinone oxidoreductase, subunit D
Protein sequence:
MKERIKAICLEKPNNVVVKEVPYPEKSDNDVLIQVESMGICGSDIGAYRGTNPLVTYPRILGHEIVGRVIESGIGMSDGVRVGDRVIVDPYVCCGQCYPCSIGRTNCCESLKVIGVHIDGGMQEVIRHPAHLLTKVPDNLPIHQLPLAEPLTIALHALHRTTLKSGEHIVIIGAGAIGLMAALAAVQYGAIPILVDILEQRLEYAKSLGIEHIVNPHKEDDIKRIKEITSGRMAEVVMEASGANISIKNTLHYASFAGRIALTGWPKTETPLPTNLITFKELNIYGSRTSKGEFEEALDMLATNKINASHIITKCIKFEEIPSFISDLSDHPENYLKINAVF

Annotated regions:
phrase: AIGLMAALAAVQYGAIPILVDILEQRLEYAKSLGIEHIVNPHKEDDIKRIKEITSGRMAEVVMEASGANISIKNTLHYASFAGRIALTGWPKTETPLPTNLITFKELNIYGSRTSKGEFEEALDML
type: DOMAIN
name: ADH-like_C
description: Alcohol dehydrogenase-like, C-terminal

phrase: DNDVLIQVESMGICGSDIGAYRGTNPLVTYPRILGHEIVGRVIESGIGMSDGVRVGDRVIVDPYVCCGQCYPCSIGRTNCCESLKVIGVHIDGGMQEVIRHPAHLLTKVP
type: DOMAIN
name: ADH-like_N
description: Alcohol dehydrogenase-like, N-terminal
Protein sequence:
MAMAERPRPGWASYQNPNINNCQDMGNSILLLLGLIVCINIGINLVTLLWSRIRILLHRMFHIICEKETSTSLGKLVQPLRKQTYPKVHLRCTMDPVKMTVTPPPTRRRYRHRAPPSRRARCPIAWAPDTDDEKPPHQHPAICSRHWNDSKDWEGFQSMQEVWEPWTQDGLEQPPQTIRFQPAVEARPLKSEIRSDQGLEAYVYTVNPPPPSPEALSHKNNAAGSGGCVEGEQAQGQPVSPSFLGPANVPEIPRRHSSGRIVYDARDVRRRLRELTQEVEALSHCYPLVSGSSAAEGTGKDWVYRPLKGR

Annotated regions:
phrase: NNCQDMGNSILLLLGLIVCINIGINLVTLLWSRIRILLHRMFHIICEKETSTSLGKLVQPLRKQTYPKVHLRCTMDPVKMTVTPPPTRRRYRHRAPP
type: DOMAIN
name: SPEM1_N
description: Spermatid maturation protein 1, N-terminal
Protein sequence:
MWNLRITPLSFGAACQGIFTSTLLLSALTVPLVCTIVYDSCLYMDINASRALANVYDLPDDFFPKIDDLVRDAKDALEPYWKSDSIKKHVLIATHFVDLIEDFWQTTQGMHEIAESLRAVIPPTTAPVPTGYLIQHEEAEEIPLGDLFKHQEERIVSFQPDYPITARIHAHLKAYAKINEESLDRARRLLWWHYNCLLWGEANVTNYISRLRTWLSTPEKYRGRDAPTIEAITRPIQVAQGGRKTSSGTRKPRGLEPRRRKVKTTVVYGRRRSKSRDRRAPSPQRAGSPLPRSSSSHHRSPSPRK

Annotated regions:
Protein sequence:
MAADKAADQGAEKHDGAGTSGITDQEKELSSSALQAFLAGNYDACLQHLNTLQDINKDDYKITLNTAVAEFCKSNQTTTDNLRQTLNQLKNQVHSAVEEMDGLDDVENSMLYYNQAVILYHLRQYTEAISVGEKLYQFIEPFEEKFAQAVCFLLVDLYLLTYQAEKALHLLAVLEKMISQGNNNSKNGKNESGNNTNKDSSNQKAESGALIEVAKSKIHQYKVRAYIQMKSLKACKREIKSVMNTAGNSAPSLFLKSNFEYLRGNYRKAVKLLNSANIAEHPGFMKTGECLRCMFWNNLGCIHFAMGKHNLGIFYFKKALQENDNACAQLGTGSSDPGKKFSGRPMCTLLTNKRYELLYNCGIQLLHIGRPLAAFECLIEAVQVYHSNPRLWLRIAECCIAANKGTSEQETKGLPSKKGIVQSIVGQGYHRKIVLASQSIQNVVYNDGQSSAIPVASMEFAAICLRNALLLLPEDQQEPKQENGSKPNNQLGGNTENSESSEACSNKSHEGDKFIAAPPSSPLKKQELENLRCSILACSAYVALALGDNLMALNHADKLLQQPKLSGSLKFLGHLYAAEALISLDRISDAITHLNPENVTDVSLGISSNEQDQGSDKGENEAMESSGKQTPQCYPSSVTSARTMMLFNLGSAYCLRSEYDKARKCLHQAASLIHPKEIPPEAILLAVYLELQNGNTQLALQIIKRNQLLPSVKTLSDMRKKPVFQPVHSLQPIQMPTFTAVQRK

Annotated regions:
phrase: TMMLFNLGSAYCLRSEYDKARKCLHQAASLIHP
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: CMFWNNLGCIHFAMGKHNLGIFYFKKALQENDN
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: EKELSSSALQAFLAGNYDACLQHLNTLQDINKD
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: SMLYYNQAVILYHLRQYTEAISVGEKLYQFIEP
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: YELLYNCGIQLLHIGRPLAAFECLIEAVQVYHS
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: WNNLGCIHFAMGKHNLGIFYFKKALQ
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat
Protein sequence:
MTDYTPQQIVARGARADAEAAADAIDNHPGLEGATYSILEEDEDKGLWRIDAFPTTDEEDAGLLEVLAGYPLKVVRETLADADWLAMALSGLPPVRAGRFFVYGMHDRGRLPASTVNLRIEAGAAFGTGHHGTTVGCLMAYDKLIKARKFKKVLDVGAGTGLLAIAAARTGSRIAVGTDIDRPSVRISKENAKVNRANAKFVHASGLGHRLVTDNAPYDLVFANILARPLISLAQDIKTALVPGGTVILSGLLRTQERMVKAAYVSRGFKVVNRIHRDAWAALVLQRP

Annotated regions:
Protein sequence:
MEQEKRIFSIDWAGRPLVVEIGQLAKQANGAVLVRYGDTVVLNTATASKEAKNVDFFPLTVNYEERLYAVGKIPGGFIKREGRPSEKAILASRLIDRPIRPLFAEGFRNEVQIVSMVMSVDQDCSPEMAALFGASLALTISDIPFEGPIAGVTVGRVDGEFVINPTVEQSEKSDIHLVVAGTKDAINMVEAGADEVPEEVILEAIMFGHEEVKRLIAFQEEIAAQVGKEKMEVVLYELDPQLEAEIRQLAEEDIKRAVQVPEKLARDAAIEEVKASVIAKYEEQEADEETLKQVNEILHKLVKEEVRRLITEEKIRPDGRKIDEIRPLSSEVGVLPRTHGSGLFTRGQTQVLSVCTLGALGDVQILDGLGIEETKRFMHHYNFPPFSVGETGPMRGPGRREIGHGALGERALEPVVPSEKEFPYTIRLVSEVLESNGSTSQASICASTLAMMDAGVPIKAPVAGIAMGLVKNDDNYTILTDIQGIEDHLGDMDFKVAGTAKGVTALQMDIKIKGLSREILEEALQQAKKGRMEILEHMMQTIREPRKELSKYAPKILTMQINPEKIREVIGPSGKQINKIIDETGVKIDIEQDGTIFISSVNEAMNQKAKQIIEDIVREVEVGQIYLGKVKRIEKFGAFVELFNGKDGLVHISELAEERVGRVEDVVSIGDEILVKVMEIDKQGRVNLSRKAVLRDKKEKKGKRPERHRMKP

Annotated regions:
phrase: VEVGQIYLGKVKRIEKFGAFVELFNGKDGLVHISELAEERVGRVEDVVSIGDEILVKVMEIDKQGRVNLSR
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: GPIAGVTVGRVDGEFVINPTVEQSEKSDIHLVVAGTKDAINMVEAGADEVPEEVILEAIMFGH
type: DOMAIN
name: ExoRNase_PH_dom2
description: Exoribonuclease, phosphorolytic domain 2

phrase: PVAGIAMGLVKNDDNYTILTDIQGIEDHLGDMDFKVAGTAKGVTALQMDIKIKGLSREILEEALQQAKK
type: DOMAIN
name: ExoRNase_PH_dom2
description: Exoribonuclease, phosphorolytic domain 2

phrase: EVGQIYLGKVKRIEKFGAFVELFNGKDGLVHISELAEERVGRVEDVVSIGDEILVKVMEIDKQGRVNLSR
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: EIRPLSSEVGVLPRTHGSGLFTRGQTQVLSVCTLGALGDVQILDGLGIEETKRFMHHYNFPPFSVGETGPMRGPGRREIGHGALGERALEPVVPSEKEFPYTIRLVSEVLESNGSTSQASICASTLAMMDAGV
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1

phrase: GRPLVVEIGQLAKQANGAVLVRYGDTVVLNTATASKEAKNVDFFPLTVNYEERLYAVGKIPGGFIKREGRPSEKAILASRLIDRPIRPLFAEGFRNEVQIVSMVMSVDQDCSPEMAALFGASLALTISDI
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1

phrase: APKILTMQINPEKIREVIGPSGKQINKIIDETGVKIDIEQDGTIFISSVNEAMNQKAKQIIEDIV
type: DOMAIN
name: KH_dom
description: K Homology domain

phrase: LEAEIRQLAEEDIKRAVQVPEKLARDAAIEEVKASVIAKYEEQEADEETLKQVNEILHKLVKEEVRRLITEEKIRPDGR
type: DOMAIN
name: PNPase_PH_RNA-bd_bac/org-type
description: Polyribonucleotide nucleotidyltransferase, RNA-binding domain

phrase: LTMQINPEKIREVIGPSGKQINKIIDETGVKIDIEQDGTIFISSVNEAMNQKAKQIIE
type: DOMAIN
name: KH_dom_type_1
description: K Homology domain, type 1

phrase: GQIYLGKVKRIEKFGAFVELFNGKDGLVHISELAEERVGRVEDVVSIGDEILVKVMEIDKQGRVNLSR
type: DOMAIN
name: S1_domain
description: S1 domain
Protein sequence:
MSRRHVAEKRIILPDMKYNSILLSRFINNIMKAGKKAVAEKIVYSAFNKIEKKHSVDPYQTFNNAMHNVKPHLEVTSVRVGGANYQVPTHVDERRGYALASRWIINAASKRSEKMMIDKLAEELFEAANNRGVAIKKKEDIHKMAEANKAFSHFSPKKMK

Annotated regions:
phrase: SILLSRFINNIMKAGKKAVAEKIVYS
type: CONSERVED_SITE
name: Ribosomal_uS7_CS
description: Small ribosomal subunit protein uS7, conserved site

phrase: SRRHVAEKRIILPDMKYNSILLSRFINNIMKAGKKAVAEKIVYSAFNKIEKKHSVDPYQTFNNAMHNVKPHLEVTSVRVGGANYQVPTHVDERRGYALASRWIINAASKRSEKMMIDKLAEELFEAANNRGVAIKKKEDIHKMAEAN
type: DOMAIN
name: Ribosomal_uS7_dom
description: Small ribosomal subunit protein uS7 domain
Protein sequence:
GSLQLLLLLLLLQCDKKGICSCAPLLTAMSSPRRIKEDLSSDEEGQVHPTLSPSEDHKIKISSLPFSVEALMADKRVPKEAPPSRAVDSSAATSTPNRHLHLGIRDSPSPLGSQKGLKPRRSNRKNSEDGTSWSKDGGSYSPPPRHLSPSSCTLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRLQEAEIEKLKMAAKPILPPGFSIPFPINSPIQAASLYGSSYQFHRPVLPIPPMGLYATPVGYSMYHLSEEGDMT

Annotated regions:
phrase: NRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRLQEA
type: DOMAIN
name: HD
description: Homeodomain

phrase: RKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRL
type: DOMAIN
name: HD
description: Homeodomain

phrase: KQYLSIAERAE
type: DOMAIN
name: HD_metazoa
description: Homeodomain, metazoa

phrase: LNLTETQVKI
type: DOMAIN
name: HD_metazoa
description: Homeodomain, metazoa

phrase: WFQNRRAKA
type: DOMAIN
name: HD_metazoa
description: Homeodomain, metazoa

phrase: FSSSLNLTETQVKIWFQNRRAKA
type: CONSERVED_SITE
name: Homeobox_CS
description: Homeobox, conserved site

phrase: KTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKR
type: DOMAIN
name: HD
description: Homeodomain

phrase: RKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAK
type: DOMAIN
name: HD
description: Homeodomain
Protein sequence:
MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTVRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQATLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEEWSASMS

Annotated regions:
phrase: PSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTVRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQATLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEE
type: DOMAIN
name: CcO_II_C
description: Cytochrome c oxidase subunit 2, C-terminal

phrase: NPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTVRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQATLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEEWSA
type: DOMAIN
name: CcO_II-like_C
description: Cytochrome c oxidase subunit II-like C-terminal

phrase: LTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTVRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQATLMSTRPGLYYGQCSEICGSNHSFMPIVLEL
type: DOMAIN
name: CcO_II-like_C
description: Cytochrome c oxidase subunit II-like C-terminal

phrase: MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEI
type: DOMAIN
name: Cyt_c_oxidase_su2_TM_dom
description: Cytochrome C oxidase subunit II, transmembrane domain

phrase: SPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTVRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQATLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKHFEEW
type: DOMAIN
name: Cyt_c_oxidase_su2
description: Cytochrome c oxidase, subunit II

phrase: VLHSWAVPSLGLKTDAIPGRLNQATLMSTRPGLYYGQCSEICGSNHSF
type: BINDING_SITE
name: Copper_CuA
description: Copper centre Cu(A)

phrase: AYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLR
type: DOMAIN
name: Cyt_c_oxidase_su2_TM_dom
description: Cytochrome C oxidase subunit II, transmembrane domain
Protein sequence:
MPVGRRDIKSLHLDELREIAQPSYRAGQIVDWLYRKRVTSFTEMTNLPQALRTKLADNFCFGKIDVVRVLGSKDTTRKFLFQLSDNNLIESVLIPASPALYGSPSDRRTICISTQVGCAYGCKFCASGLDGWKRNLRADEIVNQIMAVEEATGERIDNIVFMGMGEPLANYHNLLRAIQIINAPWGIGIGARHITISTSGLVPQIRQLADQPLQIRLAVSLHGANDDVRSRIMPVNRKYNLSALLDACRYFTSRKKQRITFEYILIAQVNDSDEQARQLAKHARALEAKVNLIPYNKVEGLAWTQPSPDRQKKFLAVLRAAGARVTLRREKGDDIAAACGQLRLQTQRGLAAPVLESSG

Annotated regions:
phrase: EIAQPSYRAGQIVDWLYRKRVTSFTEMTNLPQALRTKLADNF
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: ISTQVGCAYGCKFCASGLDGWKRNLRADEIVNQIMAVEEATGERIDNIVFMGMGEPLANYHNLLRAIQIINAPWGIGIGARHITISTSGLVPQIRQLADQPLQIRLAVSLHGANDDVRSRIMPVNRKYNLSALLDACRYFTSRKKQRITFEYILIAQVNDSDEQAR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LDELREIAQPSYRAGQIVDWLYRKRVTSFTEMTNLPQALRTKLADNFCFGKIDVVRVLGSKDTTRKFLFQLSDNNLIESVLIPASPALYGSPSDRRTICISTQVGCAYGCKFCASGLDGWKRNLRADEIVNQIMAVEEATGERIDNIVFMGMGEPLANYHNLLRAIQIINAPWGIGIGARHITISTSGLVPQIRQLADQPLQIRLAVSLHGANDDVRSRIMPVNRKYNLSALLDACRYFTSRKKQRITFEYILIAQVNDSDEQARQLAKHARALEAKVNLIPYNKVEGLAWTQPSPDRQKKFLAVLRAAGARVTLRREKGDDIAAACGQLRLQTQ
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: PSDRRTICISTQVGCAYGCKFCASGLDGWKRNLRADEIVNQIMAVEEATGERIDNIVFMGMGEPLANYHNLLRAIQIINAPWGIGIGARHITISTSGLVPQIRQLADQPLQIRLAVSLHGANDDVRSRIMPVNRKYNLSALLDACRYFTSRKKQRITFEYILIAQVNDSDEQARQLAKHARALEAKVNLIPYNKVEGLAWTQPSPDRQKKFLAVLRAAGARVTLRREKGD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: RTICISTQVGCAYGCKFCASGLDGWKRNLRADEIVNQIMAVEEATGERIDNIVFMGMGEPLANYHNLLRAIQIINAPWGIGIGARHITISTSGLVPQIRQLADQPLQIRLAVSLHGANDDVRSRIMPVNRKYNLSALLDACRYFTSRKKQRITFEYILIAQVNDSDEQARQLAKHARALEAKVNLIPYNKVEGLAWTQPSPDRQKKFLAVLR
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain
Protein sequence:
MHCGLLEEPDMDSTESWIERCLNESESKRFSSHSSIGNISNDENEEKENNRASKPHSTPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKLDSQPVNAASFGKIIRQQFPQLTTRRLGTRGQSKYHYYGIAVKESSQYYDVMYSKKGAAWVNETGKKEVTKQTVAYSPRSKLGTLLPDFPNVKDLNLPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQGMPPHMLPVLGSSTVVNIVGVCDSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFELSRRFSQILKRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSREDQRRLIIQLYQEFDRLLEDQSPIEAYIEWLDSMVERCVVRVAGKRPGSLKRVAQQFLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLESLHCQERANELMRAMKGEGAPADTGEELMLMSSTPTSTSPAPYSPAKSVHSVGVPAVGSPNSAQSPEYTSISATTGAVQSYTWSLTYTVTTSGGSPTEPGSQLSCMRGGPALHGSSSAHRMPVYPHRDEHGYTGSYNYSSYANQHHHAIQSQYSSLTHEAGLPTPLHYSSYHRTSAQYPLNSQMSRMESCLMSGSPLLHSSPVTPRWPDVPSANSCYSSPTVHASRYSTGDMYSPLAPRRNSEYEHAQHFPGFAYINGEATTGWAK

Annotated regions:
phrase: ATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKLDSQPVNAASFGKIIRQQFPQLTTRRLGTRGQSKYHYYGIAV
type: DOMAIN
name: DNA-bd_RFX
description: DNA-binding RFX-type winged-helix domain

phrase: TLQWLEENYEIAEGVCIPRSALYMHYLDFCEKLDSQPVNAASFGKIIRQQFPQLTTRRLGTRGQSKYHYYGIAVK
type: DOMAIN
name: DNA-bd_RFX
description: DNA-binding RFX-type winged-helix domain
Protein sequence:
MVSAISEDSASATASGQCEVVKEELPAGNYILVAVEIDTTGRRLIDEIVQLAGYTSKGNFQQYIMPYMNLNQAARQRHQIRVISIGFYRMLKSMQTYKIIKSKSEVAALMDFLNWLETLLAKQPNKEGIVMLYHDDRKFIPYMILEALKKYSLIDRFNRSVKAFANTCPMAKTFLGKHGIKNCGLRKLSMLLAKSKDGNSTKEDEHENPEGNSSITDNSGHKNQKQGAFEGSANVRAKMVYEMALQLIESESTESPESFESPESSESSEAEVKLLNAVRPFSQLLSSTILELKDQNHSLGRQNSFRPVFLNYFRTTLNYRVRAVKYRIGLAEHGFTLKSLKAIWSDKRKPGLELVLTAIDSLKTEETAELLDLLDSYYDPSKTTIKPRCKRSGNGTRRRNRAKGAASSKNGAIGAGGDNSVPDSATKPGGRPRRKRNNIRNNILGPQNTEKGSPKAEMKTSTPKSMSIKPPSEFADI

Annotated regions:
phrase: RPVFLNYFRTTLNYRVRAVKYRIGLAEHGFTLKSLKAIWSDKRKPGLELVLTAIDSLKTEETAELLDLLDS
type: DOMAIN
name: SAM_Exu
description: Exuperantia, SAM-like domain

phrase: YILVAVEIDTTGRRLIDEIVQLAGYTSKGNFQQYIMPYMNLNQAARQRHQIRVISIGFYRMLKSMQTYKIIKSKSEVAALMDFLNWLETLLAKQPNKEGIVMLYHDDRKFIPYMILEALKKYSLIDRFNRSVKAFANTCPMAKTFLGKHGIKNCGLRKLSML
type: DOMAIN
name: Exu_RNase_H-like
description: Exuperantia RNAse H-like domain
Protein sequence:
MATVTSNASPKSFSFTVSNPFKTLIPNKSPSLCYPTRNKNHHRLGFSIKATVSTPPSIATGNAPSPDYRVEILSESLPFIQKFRGKTIVVKYGGAAMTSPELKSSVVSDLVLLACVGLRPILVHGGGPDINRYLKQLNIPAEFRDGLRVTDATTMEIVSMVLVGKVNKNLVSLINAAGATAVGLSGHDGRLLTARPVPNSAQLGFVGEVARVDPSVLRPLVDYGYIPVIASVAADDSGQAYNINADTVAGELAAALGAEKLILLTDVAGILENKEDPSSLIKEIDIKGVKKMIEDGKVAGGMIPKVKCCIRSLAQGVKTASIIDGRRQHSLLHEIMSDEGAGTMITG

Annotated regions:
phrase: KTIVVKYGGAAMTSPELKSSVVSDLVLLACVGLRPILVHGGGPDINRYLKQLNIPAEFRDGLRVTDATTMEIVSMVLVGKVNKNLVSLINAAGATAVGLSGHDGRLLTARPVPNSAQLGFVGEVARVDPSVLRPLVDYGYIPVIASVAADDSGQAYNINADTVAGELAAALGAEKLILLTDVAGILENKEDPSSLIKEIDIKGVKKMIEDGKVAGGMIPKVKCCIRSLAQGVKTASII
type: DOMAIN
name: Asp/Glu/Uridylate_kinase
description: Aspartate/glutamate/uridylate kinase
Protein sequence:
MSDYKDTLNLPKTSFSMKGNLANKEPMILNKWEKQGIYKKIREHFAGREKFVLHDGPPYANGSIHVGHAVNKILKDIIIKSKTLSGYDAPFTPTWDCHGLPIELQVEKKHGKAGQSISEDDFRKECRKYAKKQVEIQKKDFKRLGVLGDWEQPYLTMNFDYEANMIRTLAKIIENGHLSKGFKPVHWCTDCGSALAEAEVEYADKISPAIDVKFKIKDKDKLAQAFGLDSLNHDAFAIIWTTTPWTLPANQAIAVNNQLNYSLIKIEDFYIILAENLVEQTLKRYAIENAQIIATTTGDKLTGIIAEHPFYSRHVPILHGDHVTDDSGTGLVHTAPTHGVDDFTLGKEHNLSMEIFVKGNGCYSENTKLFAGEFIFKANDRIIELLGEKKRLMNSDKIKHSYPHCWRHKTPLMFRATPQWFISMEKQGLRNKALQAIKETSWAPSWGQARIEGMVKDRPDWCISRQRTWGVPLPLFIHKETEELHPNTIEILHKVAEKIEKGGIEAWFNADDCEFITETAQYKSVKDTLDVWFDSGSSSMCILDLDKRLSYPADLYLEGSDQHRGWFQTSLLVAMSAKGSQPYKEVFTHGFVVDEHGRKMSKSLGNVTSPQDIYNTLGADILRLWTASTDYKSEMAVSDQILKRTADTYRRLRNTARFLLSNLDGFNPATDIIEFDKLVKLDQWAIAKTKEFQDKIIEAYDKYQTHTVAQLIHHFCSIEMGSFYLDIIKDRQYTAKTDGHPRKSAQTAIYHIVHALVRWMAPILSFTADEIWDATPKTTDLPIQLCEWYTGLKSFDQDAELDLEYWAKIQEIRSEVNRVLEIKRNEDVVKASLEAEITIYADKDNYKLLEKLGNELRFLLISSKADLKVIEESTSSSIAANIPGLSIEITKIEEPKCERCWHRSSTVGDNPQYKDICSRCVENITTEAGESREFA

Annotated regions:
phrase: DQWAIAKTKEFQDKIIEAYDKYQTHTVAQLIHHFCSIEMGSFYLDIIKDRQYTAKTDGHPRKSAQTAIYHIVHALVRWMAPILSFTADEIWDATPKTTDLPIQLCEWYTGLKSFDQDAELDLEYWAKIQEIRSEVNRVLEIKRNEDVVKASLEAEI
type: DOMAIN
name: M/V/L/I-tRNA-synth_anticd-bd
description: Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding

phrase: KCERCWHRSSTVGDNPQYKDICSRCV
type: DOMAIN
name: Znf_FPG/IleRS
description: Zinc finger, FPG/IleRS-type

phrase: ILNKWEKQGIYKKIREHFAGREKFVLHDGPPYANGSIHVGHAVNKILKDIIIKSKTLSGYDAPFTPTWDCHGLPIELQVEKKHGKAGQSISEDDFRKECRKYAKKQVEIQKKDFKRLGVLGDWEQPYLTMNFDYEANMIRTLAKIIENGHLSKGFKPVHWCTDCGSALAEAEVEYADKISPAIDVKFKIKDKDKLAQAFGLDSLNHDAFAIIWTTTPWTLPANQAIAVNNQLNYSLIKIEDFYIILAENLVEQTLKRYAIENAQIIATTTGDKLTGIIAEHPFYSRHVPILHGDHVTDDSGTGLVHTAPTHGVDDFTLGKEHNLSMEIFVKGNGCYSENTKLFAGEFIFKANDRIIELLGEKKRLMNSDKIKHSYPHCWRHKTPLMFRATPQWFISMEKQGLRNKALQAIKETSWAPSWGQARIEGMVKDRPDWCISRQRTWGVPLPLFIHKETEELHPNTIEILHKVAEKIEKGGIEAWFNADDCEFITETAQYKSVKDTLDVWFDSGSSSMCILDLDKRLSYPADLYLEGSDQHRGWFQTSLLVAMSAKGSQPYKEVFTHGFVVDEHGRKMSKSLGNVTSPQDIYNTLGADILRLWTASTDYKSEMA
type: DOMAIN
name: aa-tRNA-synth_Ia
description: Aminoacyl-tRNA synthetase, class Ia

phrase: VSDQILKRTADTYRRLRNTARFLLSNLDGFNPATDIIEFDKLVKLDQWAIAKTKEFQDKIIEAYDKYQTHTVAQLIHHFCSIEMGSFYLDIIKDRQYTAKTDGHPRKSAQTAIYHIVHALVRWMAPILSFTADEIWDATPKTTDLPIQLCEWYTGLKSFDQDAELDLEYWAKIQEIRSEV
type: DOMAIN
name: Anticodon_Ile_BEm
description: Isoleucyl tRNA synthetase type 1, anticodon-binding domain

phrase: PYANGSIHVGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site
Protein sequence:
MHFNTLTCVLVGLVAHTSAVPTKREAVNSCLTQAKVPTDAQGSQSWKEDGTAYNLRLPFEPAAIAVPTTVAQVSAAVECGAKHGVAISAKSGGHSYTSLGFGGEDGHLMIELDRMYSVKLAKDGTAKIQPGARLGHVATELWNQGKRALAHGTCPGVGLGGHALHGGYGMVARKHGLTLDLMIGATVVLPTGKVVHCSKTENSDLFWGIRGAGANFGVVVELEFQTFAAPEKITYFDIGLNWDQNTAPQGLYDFQEFGKGMPAEITMQMGVSKNGYSVDGAYIGDEASLRKALQPLVQKFGGVQVTATTVDWMGLVTHFAGAGVNVNPTSASYDAHDNFYASSLAAPALTLAEFKSFVNFVSTTGKSSSHSWWLQMDITGGTYSAVSKPKPSDTAYVHRDTLLLFQFYDSVAATAQYPSDGFNLIKGLRQSISSSLKAGTWGMYANYPDSQIKNDRATEMYWGSNVAKLEAVKAKYDPKNLFRNPQSIKPKA

Annotated regions:
phrase: LPFEPAAIAVPTTVAQVSAAVECGAKHGVAISAKSGGHSYTSLGFGGEDGHLMIELDRMYSVKLAKDGTAKIQPGARLGHVATELWNQGKRALAHGTCPGVGLGGHALHGGYGMVARKHGLTLDLMIGATVVLPTGKVVHCSKTENSDLFWGIRGAGANFGVVVELEFQTFA
type: DOMAIN
name: FAD-bd_PCMH
description: FAD-binding domain, PCMH-type

phrase: PAAIAVPTTVAQVSAAVECGAKHGVAISAKSGGHSYTSLGFGGEDGHLMIELDRMYSVKLAKDGTAKIQPGARLGHVATELWNQGKRALAHGTCPGVGLGGHALHGGYGMVARKHGLTLDLMIGATVVLPTGKVVHC
type: DOMAIN
name: Oxid_FAD_bind_N
description: FAD linked oxidase, N-terminal

phrase: YANYPDSQIKNDRATEMYWGSNVAKLEAVKAKYDPKNLFRNPQSI
type: DOMAIN
name: BBE
description: Berberine/berberine-like
Protein sequence:
MVSTLDDTKRNAIAEKLADAKLLQELIIENQERFLRESTDNEISNRIRDFLEDDRKNLGIIETVIVQYGIQKEPRQTVREMVDQVRQLMQGSQLNFFEKVAQHELLKHKQVMSGLLVHKAAQKVGADVLAAIGPLNTVNFENRAHQEQLKGILEILGVRELTGQDADQGIWGRVQDAIAAFSGAVGSAVTQGSDKQDMNIQDVIRMDHNKVNILFTELQQSNDPQKIQEYFGQIYKDLTAHAEAEEEVLYPRVRSFYGEGDTQELYDEQSEMKRLLEQIKAISPSAPEFKDRVRQLADIVMDHVRQEESTLFAAIRNNLSSEQTEQWATEFKAAKSKIQQRLGGQATGAGV

Annotated regions:
phrase: IQDVIRMDHNKVNILFTELQQSNDPQKIQEYFGQIYKDLTAHAEAEEEVLYPRVRSFYGEGDTQELYDEQSEMKRLLEQIKAISPSAPEFKDRVRQLADIVMDHVRQEESTLFA
type: DOMAIN
name: Hemerythrin-like
description: Hemerythrin-like
Protein sequence:
MYIPIITGGKSKEREISLTSAKNVFNSISNLGYKPVILDLIDDDFINKIQNYKFAFNVVHGDYGEDGRLPSLLEILGIDYTCSNPETCIATYDKFIFYSLFKNYIQMPQTTLTNKLILPPFEYPFIIKPRKSGSSKGVYIIHNENEYKFYLEKDLKEFQEVLVQEYIKGREITISYIQKNEEFILLPILEIIPKKEFYDYEAKYTNGLTELKPQLNSPEKIIQKINEIGNHVMQTLTFKDMFRIDAILKDDEVYVLEINTVPGLTELSDLPTSALAAGISFDELINIIIKNHVARVAG

Annotated regions:
phrase: HGDYGEDGRLP
type: CONSERVED_SITE
name: D-Ala_lig_Van_CS
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site

phrase: FYSLFKNYIQMPQTTLTNKLILPPFEYPFIIKPRKSGSSKGVYIIHNENEYKFYLEKDLKEFQEVLVQEYIKGREITISYIQKNEEFILLPILEIIPKKEFYDYEAKYTNGLTELKPQLNSPEKIIQKINEIGNHVMQTLTFKDMFRIDAILKDDEVYVLEINTVPGLTELSDLPTSALAAGISFDELINIII
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold

phrase: LPPFEYPFIIKPRKSGSSKGVYIIHNENEYKFYLEKDLKEFQEVLVQEYIKGREITISYIQKNEEFILLPILEIIPKKEFYDYEAKYTNGLTELKPQLNSPEKIIQKINEIGNHVMQTLTFKDMFRIDAILKDDEVYVLEINTVPGLTELSDLPTSALAAGISFDELINIII
type: DOMAIN
name: Dala_Dala_lig_C
description: D-alanine--D-alanine ligase, C-terminal
Protein sequence:
MEKFKAAMLLAGTGDALGYKNFSWVFCASGVKIQEELKQLGGLENLVLSIDGWPVSNNTLMHIATAESLVSDYWSIEDLYRDMVKRYIDVVDKLQGRRPDPATIEGCAHLKPDNYLLAWHTPFNEKGSGFGAATKAMCIGMRYWKPGRLETLIEVSIESGRMTHNHPTGFLGSLCTALFTSYAIQEKPLAQWGREMLKLLPMAEEYCKKTIRHMAEYQEHWFYFEAKWQFYLEEREIAEENENKPKFPDKYDAEERDKAYKTWSSEGRGGRRGHDAPMIAYDALLGAGGDWKELCNRAMFHGGEGGATGSIAGCLYGLLYGISKVPKSLYQQLEMKERLENLGEKLYHLATMEK

Annotated regions:
Protein sequence:
MSPGPPAVGGVSPPVMVPGSAPPFQPTHQYFQHHYHQTPPGKLRDRSPRLSAEMRKNRDTATSSPASSGVSIQQRRGSTTQNSGVGSIGLPVLGGRGRGVMSDGHMQRTFHEAMRQRRTSLPANSLSLNGAKVTGSSLSEAKGLIADMLMNKELPGNVASCLRAVTMLLEQRPLPLNGLLNDFGLPSVVENPYGGESMVVGASKPRISNITFSTVTSATGLPTVPAEPNKARSSSYWKTEASPSNNNEHETPVDLLRKISVSRKESGTHVDTVVTTIDGQRYDTRELDTDPDLAETAVWSFPIFQMSRKHPQTILSRLTYNIFQQAELFRIFKVSPIKFFNFFHALEKGYWEIPYHNRIHAADVLHGCYYLSAHPVRSTFLTPKTPDSVLTPPHPHHQHSSIMSQLSTLELMALFTAAAMHDYDHPGRTNAFLVQVEDKKAILYNDRSVLENHHAAESWKLLNKPENHFIENLDPAEMKRFRYLVLEYILATDLKQHFEIIMTFTERLTEIDVQVETDRLLIGKLLIKMADINSPTKPYGLHRQWTDRICEEFYEQGDDERRRGLPITPYMDRGDAQVAKLQDSFIAHVVSPLATAMNECGLLPILPGLDTSELIINMEHNHRKWKEQIELENGGSYEAQITCNGGTAVNGVIEEESASTSDSPDPRRDSPLDSDLSQ

Annotated regions:
phrase: LSTLELMALFTAAAMHDYDHPGRTNAFLVQVEDKKAILYNDRSVLENHHAAESWKLLNKPENHFIENLDPAEMKRFRYLVLEYILATDLKQHFEIIMTFTERLTEIDVQVETDRLLIGKLLIKMADINSPTKPYGLHRQWTDRICEEF
type: DOMAIN
name: HD/PDEase_dom
description: HD/PDEase domain

phrase: HDYDHPGRTNA
type: CONSERVED_SITE
name: PDEase_CS
description: 3'5'-cyclic nucleotide phosphodiesterase, conserved site

phrase: RYDTRELDTDPDLAETAVWSFPIFQMSRKHPQTILSRLTYNIFQQAELFRIFKVSPIKFFNFFHALEKGYWEIPYHNRIHAADVLHGCYYLSAHPVRSTFLTPKTPDSVLTPPHPHHQHSSIMSQLSTLELMALFTAAAMHDYDHPGRTNAFLVQVEDKKAILYNDRSVLENHHAAESWKLLNKPENHFIENLDPAEMKRFRYLVLEYILATDLKQHFEIIMTFTERLTEIDVQVETDRLLIGKLLIKMADINSPTKPYGLHRQWTDRICEEFYEQGDDERRRGLPITPYMDRGDAQVAKLQDSFIAHVVSPLATAMNECGLLPILPGLDTSELIINMEHNHRKWKEQIEL
type: DOMAIN
name: PDEase_catalytic_dom
description: 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain

phrase: YHNRIHAADVLHGCYYLSAHPVRSTFLTPKTPDSVLTPPHPHHQHSSIMSQLSTLELMALFTAAAMHDYDHPGRTNAFLVQVEDKKAILYNDRSVLENHHAAESWKLLNKPENHFIENLDPAEMKRFRYLVLEYILATDLKQHFEIIMTFTERLTEIDVQVETDRLLIGKLLIKMADINSPTKPYGLHRQWTDRICEEFYEQGDDERRRGLPITPYMDRGDAQVAKLQDSFIAHVVSPLATAMNE
type: DOMAIN
name: PDEase_catalytic_dom
description: 3'5'-cyclic nucleotide phosphodiesterase, catalytic domain

phrase: IPYHNRIHAADVLHGCYYLSAHPVRSTFLTPKTPDSVLTPPHPHHQHSSIMSQLSTLELMALFTAAAMHDYDHPGRTNAFLVQVEDKKAILYNDRSVLENHHAAESWKLLNKPENHFIENLDPAEMKRFRYLVLEYILATDLKQHFEIIMTFTERLTEIDVQVETDRLLIGKLLIKMADINSPTKPYGLHRQ
type: DOMAIN
name: HD/PDEase_dom
description: HD/PDEase domain