nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MLDLRYITENTEDLKKVLELRGFKEIGIIDELKSIIQRKREFQKEADILREERNKASKEVGKIKQSGGDITKISASVKLVGEKIKEIESKLEQEENALLNINLGLPNILDPKVPPGKSEHDNIVQYEVGKIPTFQFVPKTHFEIGEALHWIDFEKGVKLSGARAYTYWKDGARLERALMNFMLDVHTKEHDYTEVWVPSMVNDESMMATGQYPKFKDEFYRIDKDELNLIPTAEVPLTNLYRDEIIPEDQLPISVTAHTSCFRREAGSYGKDTRGLVRVHQFQKVELVKFCKPEDSEEEHKKMLSHAENILKKLELPYRVIILCSGDISANSSITYDIEVWMPGLNRYMEISSVSNFRDFQARRGKIRYKSKDGKNQLVHTINGSGLALGRTYAAILENFQNEDGTLRIPEVLKSYF

Annotated regions:
phrase: RLERALMNFMLDVHTKEHDYTEVWVPSMVNDESMMATGQYPKFKDEFYRIDKDELNLIPTAEVPLTNLYRDEIIPEDQLPISVTAHTSCFRREAGSYGKDTRGLVRVHQFQKVELVKFCKPEDSEEEHKKMLSHAENILKKLELPYRVIILCSGDISANSSITYDIEVWMPGLNRYMEISSVSNFRDFQARRGKIRYKSKDGKNQLVHTINGSGLALGRTYAAILENFQNEDGTLRI
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: MLDLRYITENTEDLKKVLELRGFKEIGIIDELKSIIQRKREFQKEADILREERNKASKEVGKIKQSGGDITKISASVKLVGEKIKEIESKLEQEENALLNINLGLPN
type: DOMAIN
name: Ser-tRNA-synth_1_N
description: Serine-tRNA synthetase, type1, N-terminal

phrase: DNIVQYEVGKIPTFQFVPKTHFEIGEALHWIDFEKGVKLSGARAYTYWKDGARLERALMNFMLDVHTKEHDYTEVWVPSMVNDESMMATGQYPKFKDEFYRIDKDELNLIPTAEVPLTNLYRDEIIPEDQLPISVTAHTSCFRREAGSYGKDTRGLVRVHQFQKVELVKFCKPEDSEEEHKKMLSHAENILKKLELPYRVIILCSGDISANSSITYDIEVWMPGLNRYMEISSVSNFRDFQARRGKIRYKSKDGKNQLVHTINGSGLALGRTYAAILENFQNEDGTLRIPEVLKS
type: DOMAIN
name: SerRS_core
description: Serine-tRNA ligase catalytic core domain

phrase: DKDELNLIPTAEVPLTNLYRDEIIPEDQLPISVTAHTSCFRREAGSYGKDTRGLVRVHQFQKVELVKFCKPEDSEEEHKKMLSHAENILKKLELPYRVIILCSGDISANSSITYDIEVWMPGLNRYMEISSVSNFRDFQARRGKIRYKSKDGKNQLVHTINGSGLALGRTYAAILEN
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
Protein sequence:
MEFDPTKINISSIDHVTILQYIDEPNDIRLTVCIIQNINNITYYINITKINPHLANQFRAWKKRIAGRDYMTNLSRDTGIQQSNLTETIRNCQKNRNIYGLYIHYNLVINVVIDWITDVIVQSILRGLVNWYIDNNTYTPNTPNNTTTISELDIIKILDKYEDVYKVSKEKECGICYEVVYSKRLENDRYFGLLDSCNHIFCITCINIWHRTRRETGASDNCPICRTRFRNITMSKFYKLVN

Annotated regions:
phrase: CGICYEVVYSKRLENDRYFGLLDSCNHIFCITCINIWHRTRRETGASDNCPI
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: CGICYEVVYSKRLENDRYFGLLDSCNHIFCITCINIWHRTRRETGASDNCPIC
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: CNHIFCITC
type: CONSERVED_SITE
name: Znf_RING_CS
description: Zinc finger, RING-type, conserved site

phrase: YIDEPNDIRLTVCIIQNINNITYYINITKINPHLANQFRAWKKRIAGRDYMTNLSRDTGIQQSNLTETIRNCQKNRNIYGLYIHYNLVINVVIDWITDVIVQSILRGLVN
type: DOMAIN
name: KilA_N
description: KilA, N-terminal

phrase: TYYINITKINPHLANQFRAWKKRIAGRDYMTNLSRDTGIQQSNLTETIRNCQKNRNIYGLYIHYNLVINVVIDWITDVI
type: DOMAIN
name: KilA/APSES_HTH
description: KilA/APSES-type HTH, DNA-binding

phrase: ECGICYEVVYSKRLENDRYFGLLDSCNHIFCITCINIWHRTRRETGASDNCPIC
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type
Protein sequence:
MRLIPLATPQQVGKWAARHIVKRINDFNPTADRPFVLGLPTGGTPLEAYKALIEMHKAGQVSFKHVVTFNMDEYVGLPKDHPESYHSFMYRNFFDHVDIPEENINLLDGNAPDIDAECRRYEEKIRAYGKIHLFMGGVGNDGHIAFNEPASSLASRTRIKTLTHDTRVANSRFFGGDVNQVPKYALTVGVGTLLDAQEVMILVLGHVKAQALQAAVEGNVNHMWTISCLQLHPKAVIVCDEPSTMELKVKTLKYFTELEAENIKDL

Annotated regions:
phrase: TPQQVGKWAARHIVKRINDFNPTADRPFVLGLPTGGTPLEAYKALIEMHKAGQVSFKHVVTFNMDEYVGLPKDHPESYHSFMYRNFFDHVDIPEENINLLDGNAPDIDAECRRYEEKIRAYGKIHLFMGGVGNDGHIAFNEPASSLASRTRIKTLTHDTRVANSRFFGGDVNQVPKYALTVGVGTLLDAQEVMILVLGHVKAQALQAAVEGNVNHMWTISC
type: DOMAIN
name: Glc/Gal-6P_isomerase
description: Glucosamine/galactosamine-6-phosphate isomerase

phrase: IRAYGKIHLFMGGVGNDG
type: CONSERVED_SITE
name: Glucosamine6P_isomerase_CS
description: Glucosamine-6-phosphate isomerase, conserved site
Protein sequence:
MIDKKLLLQDFEMVALSLKKRNHAMDDGLERLREVITHYKKQLIELEGLQAFQNKVSKEFGIKMAQKADTSDLKKELESNKIKLNELSKSVSELEQQIDLKLSIIPNLVDEKTPLGANEEDNIEIKKILTPRVFNFKPKEHFELAQQNGWIDFESGVKLAKSRFSVIRGFGAKIYRALIYLMLDFNEKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLTNLYNDTIISVENLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDAMQECMLESASEILRALELPHRFVQLCSGDLGFSASNTIDIEVWLPGQNCYREISSVSNTRDFQARRAKIRFKENQKNQLAHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKYL

Annotated regions:
phrase: EHFELAQQNGWIDFESGVKLAKSRFSVIRGFGAKIYRALIYLMLDFNEKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLTNLYNDTIISVENLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDAMQECMLESASEILRALELPHRFVQLCSGDLGFSASNTIDIEVWLPGQNCYREISSVSNTRDFQARRAKIRFKENQKNQLAHTLNGSSLAVGRTMVALMENHQQADGSIHI
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: MIDKKLLLQDFEMVALSLKKRNHAMDDGLERLREVITHYKKQLIELEGLQAFQNKVSKEFGIKMAQKADTSDLKKELESNKIKLNELSKSVSELEQQIDLKLSIIPNL
type: DOMAIN
name: Ser-tRNA-synth_1_N
description: Serine-tRNA synthetase, type1, N-terminal

phrase: KIENENLYLIPTAEVTLTNLYNDTIISVENLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDAMQECMLESASEILRALELPHRFVQLCSGDLGFSASNTIDIEVWLPGQNCYREISSVSNTRDFQARRAKIRFKENQKNQLAHTLNGSSLAVGRTMVALMEN
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: DNIEIKKILTPRVFNFKPKEHFELAQQNGWIDFESGVKLAKSRFSVIRGFGAKIYRALIYLMLDFNEKNGFEIIYTPALVNEKMLFGTGQLPKFKEDVFKIENENLYLIPTAEVTLTNLYNDTIISVENLPIKMTAHTPCFRSEAGSAGKDTRGMIRQHQFDKVELVAITHPKESDAMQECMLESASEILRALELPHRFVQLCSGDLGFSASNTIDIEVWLPGQNCYREISSVSNTRDFQARRAKIRFKENQKNQLAHTLNGSSLAVGRTMVALMENHQQADGSIHIPKALEKY
type: DOMAIN
name: SerRS_core
description: Serine-tRNA ligase catalytic core domain
Protein sequence:
MSSLRAHQKKNPTPTQCQNQTTLDSICKDIQTGKITRIVALVGAGLSTSSGLADFRTPDTGLYAKLEPLQLPYPEALFHISYFKHTPEPFYAIARGRHPWNTKPGVGHAFLALLEKKGVLGFVFTQNIDGLELDAGVSRERVMNLHGDWSDQHCIKCRSSYPADRMRKAILTGEVPFCVQANCEGIVKPAIVMFGESLPEGFDSREEEMLSTADLLLVIGTSLKVAPCSEIPRRLPSHVPRVLVNRELVGNIGTRESDVCLLGDCDAWLREVARHLGWDEELESVWKDTLVRKEKSSRDKGWDDKAEQSPTLEECIVRAAEQMKVRMGVSEGHRRMLEGHLGEKMAEIMAKRGQ

Annotated regions:
phrase: QCQNQTTLDSICKDIQTGKITRIVALVGAGLSTSSGLADFRTPDTGLYAKLEPLQLPYPEALFHISYFKHTPEPFYAIARGRHPWNTKPGVGHAFLALLEKKGVLGFVFTQNIDGLELDAGVSRERVMNLHGDWSDQHCIKCRSSYPADRMRKAILTGEVPFCVQANCEGIVKPAIVMFGESLPEGFDSREEEMLSTADLLLVIGTSLKVAPCSEIPRRLPSHVPRVLVNRELVGNIGTRESDVCLLGDCDAWLREVARHLGW
type: DOMAIN
name: Ssirtuin_cat_dom
description: Sirtuin family, catalytic core domain
Protein sequence:
MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGPLVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRMVSKIARPDTSSETLIREALRAAL

Annotated regions:
phrase: MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLLY
type: DOMAIN
name: DNA_helicase_Holl-junc_RuvA_I
description: DNA helicase, Holliday junction RuvA type, domain I, bacterial

phrase: KELIKTNGVGPKLALAILS
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: GPLVKLPGIGKKTAERLIV
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: DAEQEAVAALVALGYKPQEASRMVSKIARPDTSSETLIREALR
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal

phrase: DAEQEAVAALVALGYKPQEASRMVSKIARPDTSSETLIREAL
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal
Protein sequence:
MLAPKKQKFRKAHKGRVASKAKAGTTLAFGSFGLKSIDGWRVTARQIEAGRKAATRCMKRQGRLWIRIFPDVPVSKKPAEVRMGKGKGSPEFFAVRVSPGRIMFEIEGVEENVALRALELASAKLPVRTRIVRRYE

Annotated regions:
phrase: KRQGRLWIRIF
type: CONSERVED_SITE
name: Ribosomal_uL16_CS
description: Large ribosomal subunit protein uL16, conserved site

phrase: AGTTLAFGSFGLKSIDGWRVTARQIEAGRKAATRCMKRQGRLWIRIFPDVPVSKKPAEVRMGKGKGSPEFFAVRVSPGRIMFEIEGVEENVALRALELASAKLPVRTRI
type: DOMAIN
name: Ribosomal_uL16_dom
description: Large ribosomal subunit protein uL16 domain

phrase: RMGKGKGSPEF
type: CONSERVED_SITE
name: Ribosomal_uL16_CS
description: Large ribosomal subunit protein uL16, conserved site
Protein sequence:
MLEHLRATDPIIADLIEREAQRQRQGLELIASENYTSLAVMEAQGSVLTNKYAEGLPGRRYYGGCEFVDAIEQLAIERACQLFGTSHANVQPHSGAQANIAVFTALLQPGDTILGMRLDHGGHLTHGSPVNFSGKWYNVHFYGVDAQTGQIDYDDLASKARAIRPKLITSGASAYPRIIDFARMRQIADEVGALLMADIAHIAGLVAAGEHPSPVGHAHVITTTTHKTLRGPRGGLILMGDDFAKQLNSSVFPGTQGGPLMHVIAGKAVAFGEALRPEFRQYAAQIRRNARALAEGLMAQGLTLVSGGTDNHLMLVDLRSTGLTGAQAQRALDKAAITVNKNAIPDDPQPPMKTSGIRIGTPAVTTRGMREPEMAQIAAWIGEVLMYPDDEARLNRIAGEVADLCRHFPVPADMVQVRG

Annotated regions:
phrase: RATDPIIADLIEREAQRQRQGLELIASENYTSLAVMEAQGSVLTNKYAEGLPGRRYYGGCEFVDAIEQLAIERACQLFGTSHANVQPHSGAQANIAVFTALLQPGDTILGMRLDHGGHLTHGSPVNFSGKWYNVHFYGVDAQTGQIDYDDLASKARAIRPKLITSGASAYPRIIDFARMRQIADEVGALLMADIAHIAGLVAAGEHPSPVGHAHVITTTTHKTLRGPRGGLILMGDDFAKQLNSSVFPGTQGGPLMHVIAGKAVAFGEALRPEFRQYAAQIRRNARALAEGLMAQGLTLVSGGTDNHLMLVDLRSTGLTGAQAQRALDKAAITVNKNAIPDDPQPPMKTSGIRIGTPAVTTRGMREPEMAQIAAW
type: DOMAIN
name: SHMT-like_dom
description: Serine hydroxymethyltransferase-like domain

phrase: HVITTTTHKTLRGPRG
type: BINDING_SITE
name: Ser_HO-MeTrfase_PLP_BS
description: Serine hydroxymethyltransferase, pyridoxal phosphate binding site
Protein sequence:
MSVATSDMSGAGPEQAKAVLIAGPTASGKSALALRLAEARGGVVINTDSMQVYRDLRVLTARPTPDEEARAPHRLYGTVDAAQNFSAGAWLDAAAGALAEARRAGAMPIFIGGSGLYFKALTRGLSAVPPIAPEVREAVRERLARDGVAALHAELARCDSEAAARLNVADRSRVARALEVIIATGKPQAAWHAEALPPLLPPSEVLAAVFLAPQREALYARIDARFATMLAEGALDEVAALRARQLDPLLPAMKAHGVPALIRHLDGALSLDEAAAIGCADTRHYAKRQFTWFRHQLPEFCWVAPEEAGNYLGDVIPGRERSERARNP

Annotated regions:
Protein sequence:
MVGVTSISSPAISADERSHEVDHPSSLVAHFGADQPLPLDCGIDLTPFQIAYQTYGELNADRSNAILICHALTGDQHVANVHPVTGKPGWWETLVGAGRPLDPSQYFIICANVIGGCMGSTGPASINPATGKVWGLDFPVITIPDMVRAQAMLIDRLGIDTLFAVVGGSMGGMQVLQWTAAYPERVYSALAIACSTRHSAQNIAFHELGRQAVMADPDWHNGGYADRGIHPHRGLAVARMAAHITYLSDAALHRKFGRRMQDRDLPTFSFDADFQVESYLRYQGSSFVERFDANSYLYLTRAMDYFDIAGDHGGVLAKAFAGIKTRFCVVSFTSDWLFPTSESRALVHALNASSARVSFAEIETDRGHDAFLLDVPEFFDIARAFLESAGKARGLNGRGG

Annotated regions:
phrase: NAILICHALTGDQHVANVHPVTGKPGWWETLVGAGRPLDPSQYFIICANVIGGCMGSTGPASINPATGKVWGLDFPVITIPDMVRAQAMLIDRLGIDTLFAVVGGSMGGMQVLQWTAAYPERVYSALAIACSTRHSAQNIAFHELGRQAVMADPDWHNGGYADRGIHPHRGLAVARMAAHITYLSDAALHRKFGRRMQDRDLPTFSFDADFQVESYLRYQGSSFVERFDANSYLYLTRAMDYFDIAGDHGGVLAKAFAGIKTRFCVVSFTSDWLFPTSESRALVHALNASSARVSFAEIETDRGHDAFL
type: DOMAIN
name: AB_hydrolase_1
description: Alpha/beta hydrolase fold-1
Protein sequence:
MFKDEMRQTPNKPLPIAVVGEAILKQQAIEVRDFDDTLSQLASQMAASMVEAKGVGIAAPQVHSPLALFIMASRPNERYPDAPLMEPLVVVNPQIVLRSLQLEKGEEGCLSVPGQRFTIWRPQTIVVRYQNLAGQWQHSELTGFIARIFQHEFDHLQGITLLERSQMPEQKLMAQEGKPQA

Annotated regions:
Protein sequence:
MAWKSGGASHSELIHNLRKNGIIKTDKVFEVMLATDRSHYAKSNPYMDSPQSIGFQATISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGHSGKVIGIDHIKELVDDSITNVKKDDPMLLSSGRVRLVVGDGRMGFAEEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILPVGPAGGNQMLEQYDKLQDGSVKMKPLMGVIYVPLTDKEKQWSRWK

Annotated regions:
Protein sequence:
MMTEAERASIAADGTDGLLGKRGKGVFHIHTLGCQMNVHDSERIAGVLEANGYVPATEDQINDNDLDLLVLNTCAVRENAAERMYGTIGRFNRVKLVRPNLQIAVGGCMAQLDRKKIADTAPWVSAVFGTKNIEDLPKLLDQNRATGKAQVQVTEQLRQFPSQLPAARASRISSWVAISVGCNNTCTFCIVPTTRGKEKDRRPGDILDEIRQCVADGAKEVTLLGQNVNSFGYGIGDRYAFSKLLRACGTIDGLERVRFTSPHPAAFTDDVIAAMAETPNIMHQLHFPLQSGSDRILRAMRRSYRSAKFLDILGRIRAAMPDAQISTDIIVGFPGETEEDFQQTMDVVRQARFSSAFTFIYSPRPGTPAAAMEQIPRDVVQDRFDRLVALQEQITEENLATFEGRDVEVMITGKLGKKDTDTHRVTGREKTGVLVHIGVPEGEPVPEIGDFVTATVTHAGRHNLLADPDVAAGQTYSVRH

Annotated regions:
phrase: VAISVGCNNTCTFCIVPTTR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: ISVGCNNTCTFCIVPTTRGKEKDRRPGDILDEIRQCVADGAKEVTLLGQNVNSFGYGIGDRYAFSKLLRACGTIDGLERVRFTSPHPAAFTDDVIAAMAETPNIMHQLHFPLQSGSDRILRAMRRSYRSAKFLDILGRIRAAMPDAQISTDIIVGFPGETEEDFQQTM
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: RASRISSWVAISVGCNNTCTFCIVPTTRGKEKDRRPGDILDEIRQCVADGAKEVTLLGQNVNSFGYGIGDRYAFSKLLRACGTIDGLERVRFTSPHPAAFTDDVIAAMAETPNIMHQLHFPLQSGSDRILRAMRRSYRSAKFLDILGRIRAAMPDAQISTDIIVGFPGETEEDFQQTMDVVRQARFSSAFTFIYSPRPGTPAAAMEQIPRDVVQDRFDRLVALQEQITE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: FHIHTLGCQMNVHDSERIAGVLEANGYVPATEDQINDNDLDLLVLNTCAVRENAAERMYGTIGRFNRVKLVRPNLQIAVGGCMAQLDRKKIADTAPWVSAVF
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: ISSWVAISVGCNNTCTFCIVPTTRGKEKDRRPGDILDEIRQCVADGAKEVTLLGQNVNSFGYGIGDRYAFSKLLRACGTIDGLERVRFTSPHPAAFTDDVIAAMAETPNIMHQLHFPLQSGSDRILRAMRRSYRSAKFLDILGRIRAAMPDAQISTDIIVGFPGETEEDFQQTMDVVRQARFSSAFTFIYSPRPGTPAAAMEQIPRDVVQDRFDRLV
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: GVFHIHTLGCQMNVHDSERIAGVLEANGYVPATEDQINDNDLDLLVLNTCAVRENAAERMYGTIGRFNRVKLVRPNLQIAVGGCMAQLDRKKIADTAPWVSAVFGTKNIEDLPKLLDQNR
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal
Protein sequence:
MTRSAIVLAAGHGTRMKSQTHKVLHPVCGKPMIHHILDTLEEVGVDQIVVVVGQQRERVAAAVAGRADIAVQEAQLGTGDAVKAALPTLRSDTNTVVVLYGDAPLIRPQTIASMFEARETTGAAAVVLTASVPDPTGLGRVFLDDEGGVLRVVEEKDASVEERQQRIINTGIYAYRLDALQASVGRLQADNAQREYYLTDTLAILRSDGERVIAQMVEDPLEIASVNDRAQLAHVEQICRHNIATRWMREGVTIVDPSNTYIDADVVLAPDVTLLPGTLLSGRTVVCEGAVIGPHTRLVDTRVEAGAVVQNAVAVESEIGEQAQVGPFAYLRPGSRVGKRVKIGDFVEVKNSNIGDDTKVSHLAYVGDADVGNQVNVGCGVITVNYDGERKHRTVIGDNSFVGSNVNLIAPLVIGEGAYITAGSTVTDNVGDDAFVISRVPQTTKPNYVRAWKARKQNQNLVKGGDDSGH

Annotated regions:
phrase: SEIGEQAQVGPFAYLRPGSRVGKRVKIGDFVEV
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: TVIGDNSFVGSNVNLIAPLVIGEGAYITAGSTV
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: AIVLAAGHGTRMKSQTHKVLHPVCGKPMIHHILDTLEEVGVDQIVVVVGQQRERVAAAVAGRADIAVQEAQLGTGDAVKAALPTLRSDTNTVVVLYGDAPLIRPQTIASMFEARETTGAAAVVLTA
type: DOMAIN
name: MobA-like_NTP_Trfase
description: MobA-like NTP transferase

phrase: GVTIVDPSNTYIDADVVLAPDVTLLPGTLLSGRTVVCEGAVIGPHTRLVDTRVEAGAVVQNAVAVESEIGEQAQVGPFAYLRPGSRVGKRVKIGDFVEVKNSNIGDDTKVSHLAYVGDADVGNQVNVGCGVITVNYDGERKHRTVIGDNSFVGSNVNLIAPLVIGEGAYITAGSTVTDNVGDDAFVISRVP
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain
Protein sequence:
MRASLSILVAFPALAAARDVVTIGMTGSWHPADVTEDNTKLLGTALSGSSFSKSVGDKRVCYSEVTSLETQVVAGTNYRFHISGCDVTDSDGECSTSALSSCELSGFVVQIFEQSWTNTLKVTNIKAEEAATASSSSTPAPTPASTSTSASSSEETMLQSSVQQRAMFSDFV

Annotated regions:
phrase: GSWHPADVTEDNTKLLGTALSGSSFSKSVGDKRVCYSEVTSLETQVVAGTNYRFHISGCDVTDSDGECSTSALSSCELSGFVVQIFEQSWTNTLKVTNI
type: DOMAIN
name: Cystatin_dom
description: Cystatin domain
Protein sequence:
MVKDKAPDLSKHTPMMRQYLALKANHPNTLLFYRMGDFYELFHEDAEKAARLLDITLTTRGQSAGVPIKMCGIPFHSLEPYLARLVKLGESAVICEQIGDPATSKGPVERAVARIVTPGTLTDAALIDDKQDLWLLAVTTHRNTAGIARLNLASGEFILIEVPTEQIPATLERIRPAEILYPESWTPNFGVDVARTRQPDWYFEFDSARRLLCDQFEVASLAGFGAEGLKPAIAAAGALLQYAQATQSGKLPHLRGLTVEIEGAYLGLDLATRRNLELTETLRGQPSPTLFSLLDNCVTSMGSRLLRHTLHHPLRARDIPAARHGAVEALLEDYGRLGNEVRKALRGIADIERIAGRVALRNARPRDLASLRESVARLEGLRAPLSDSPAPLIAQLFTELETPYPALELLVRAIAAEPGAQVRDGGVIAPGYDPDLDELRSLNDNCGAFLVDMEARERERSGIASLKVEYNKVHGFYIEVTHANVDKIPDDYRRRQTLKNAERYITPELKAFEDKALSAQERSLAREKLLYEAILDALLPVVPTLQTIARAIAQLDLLAGFAESALKRNWCKPEFAAETQLSITGGRHPVVEGELTNQAETFIANDCLLAENRRLLLITGPNMGGKSTYMRQVALIALLAHIGCYVPADRCVLGPLDRIFTRIGASDDLASGRSTFMVEMTEAAAILHHATNQSLVLMDEIGRGTSTFDGMALAFAILRHLIEKNQSLTLFATHYFELTRLSHEYSELANVHLGAVEHNDRIVFMHAVEEGPANQSYGIQVAALAGIPTAVVRAARKQLREFEQRAAVDPLQPDLFAQGAPEPAEPEPHPVVEQLAAIDPDSLTPREALDALYALKGLLR

Annotated regions:
phrase: QPSPTLFSLLDNCVTSMGSRLLRHTLHHPLRARDIPAARHGAVEALLEDYGRLGNEVRKALRGIADIERIAGRVALRNARPRDLASLRESVARLEGLRAPLSDSPAPLIAQLFTELETPYPALELLVRAIAAEPGAQVRDGGVIAPGYDPDLDELRSLNDNCGAFLVDMEARERERSGIASLKVEYNKVHGFYIEVTHANVDKIPDDYRRRQTLKNAERYITPELKAFEDKALSAQERSLAREKLLYEAILDALLPVVPTLQTIARAIAQLDLLAGFAESALKRNWCKPEFAAETQLSITGGRHPVVEG
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: ATRRNLELTETLRGQPSPTLFSLLDNCVTSMGSRLLRHTLHHPLRARDIPAARHGAVEALLEDYGRLGNEVRKALRGIADIERIAGRVALRNARPRDLASLRESVARLEGLRAPLSDSPAPLIAQLFTELETPYPALELLVRAIAAEPGAQVRDGGVIAPGYDPDLDELRSLNDNCGAFLVDMEARERERSGIASLKVEYNKVHGFYIEVTHANVDKIPDDYRRRQTLKNAERYITPELKAFEDKALSAQERSLAREKLLYEAILDALLPVVPTLQTIARAIAQLDLLAGF
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: GYDPDLDELRSLNDNCGAFLVDMEARERERSGIASLKVEYNKVHGFYIEVTHANVDKIPDDYRRRQTLKNAERYITPELKAFEDKALSAQE
type: DOMAIN
name: DNA_mismatch_repair_MutS_clamp
description: DNA mismatch repair protein MutS, clamp

phrase: RRLLLITGPNMGGKSTYMRQVALIALLAHIGCYVPADRCVLGPLDRIFTRIGASDDLASGRSTFMVEMTEAAAILHHATNQSLVLMDEIGRGTSTFDGMALAFAILRHLIEKNQSLTLFATHYFELTRLSHEYSELANVHLGAVEHNDRIVFMHAVEEGPANQSYGIQVAALAGIPTAVVRAARKQL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: LLAVTTHRNTAGIARLNLASGEFILIEVPTEQIPATLERIRPAEILYPESWTPNFGVDVARTRQPDWYFEFDSARRLLCDQFEVASLAGFGAEGLKPAIAAAGALLQYAQATQSGKLPHL
type: DOMAIN
name: DNA_mmatch_repair_MutS_con_dom
description: DNA mismatch repair protein MutS, connector domain

phrase: SLVLMDEIGRGTSTFD
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: LITGPNMGGKSTYMRQVALIALLAHIGCYVPADRCVLGPLDRIFTRIGASDDLASGRSTFMVEMTEAAAILHHATNQSLVLMDEIGRGTSTFDGMALAFAILRHLIEKNQSLTLFATHYFELTRLSHEYSELANVHLGAVEHNDRIVFMHAVEEGPANQSYGIQVAALAGIPTAVVRAARKQLREF
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: TPMMRQYLALKANHPNTLLFYRMGDFYELFHEDAEKAARLLDITLTTRGQSAGVPIKMCGIPFHSLEPYLARLVKLGESAVICEQIGDPATSKGPVERAVARIVTPGTLTD
type: DOMAIN
name: DNA_mismatch_repair_MutS-lik_N
description: DNA mismatch repair protein MutS-like, N-terminal
Protein sequence:
MKTFTAKPETVKRDWYVVDATGKTLGRLATELARRLRGKHKAEYTPHVDTGDYIIVLNAEKVAVTGNKRSDKMYYHHTGHIGGIKEATFEEMIARRPERVIEIAVKGMLPKGPLGRAMYRKLKVYAGNEHNHAAQQPQVLDI

Annotated regions:
phrase: VKGMLPKGPLGRAMYRKLKVYA
type: CONSERVED_SITE
name: Ribosomal_uL13_CS
description: Large ribosomal subunit protein uL13, conserved site
Protein sequence:
MAIERTFSIIKPDAVSKNLIGAIYNRFESAGLKVIAAKMLHMSSEQAAGFYAEHQGKPFYDGLVSFMTSGPVMIQVLEGEEAIRRHREIMGATNPKEALAGTLRACFAESIDRNAVHGSDAPASAAREIAYFFSDAEICPRG

Annotated regions:
phrase: ERTFSIIKPDAVSKNLIGAIYNRFESAGLKVIAAKMLHMSSEQAAGFYAEHQGKPFYDGLVSFMTSGPVMIQVLEGEEAIRRHREIMGATNPKEALAGTLRACFAESIDRNAVHGSDAPASAAREIAYFFSDAE
type: DOMAIN
name: NDK-like_dom
description: Nucleoside diphosphate kinase-like domain

phrase: IERTFSIIKPDAVSKNLIGAIYNRFESAGLKVIAAKMLHMSSEQAAGFYAEHQGKPFYDGLVSFMTSGPVMIQVLEGEEAIRRHREIMGATNPKEALAGTLRACFAESIDRNAVHGSDAPASAAREIAYFFSDAEIC
type: DOMAIN
name: NDK-like_dom
description: Nucleoside diphosphate kinase-like domain

phrase: NAVHGSDA
type: ACTIVE_SITE
name: Nucleoside_diP_kinase_AS
description: Nucleoside diphosphate kinase, active site
Protein sequence:
MKKVIVGTLFALVLVLAGCSSQNSDTKKTGDKLNVVATYSILADIVKNVGGDKIELHSIVPVGVDPHEYDPLPDNIQSAADADLIFYNGLNLETGNGWFDRMLETADKSRDDKDQVVELSKGVKPKYLTEKGKTSETDPHAWLDLHNGIIYTENVRDALVKADPDNANFYKENAKKYIDKLATLDKEAKQKFADLPENQKTLVTSEGAFKYFAARYGLKAAYIWEINTESQGTPDQMKQIISIVEKERVPNLFVETSVDPRSMESVSKETGVPIFAKIFTDSTAKKGEEGDTYLEMMRYNLDKIHDGLAK

Annotated regions:
Protein sequence:
MEDLETKCASLRTEVAATEAQLARLKRELHDAEEAALKSRAQDASDANTEAKTRAKGKWPLSREEYRRYGRQMIVPQLGLQGQLKLRDAKVLIVGAGGLGCPAALYLAGAGVGTLGLVDGDTVESSNLHRQVLHRSKNVGKLKVDSAIEYLKEWVSDSWITGRVEYILISIHGLRLNPYSTYIAHRAHLAPQEAPDIFKDYDLILDCTDNPATRYLISDTAVLLGKPLVSASALRTEGQLMVLNNPPRPAGDKTGGPCYRCVFPKPPPANSITSCADGGILGPVVGTMGVLQALEAIKVLTALEGTAEATPPSLLIFSAYSTPQFRTIKLRSRRPNCAVCSTTASVTLESVRSGSMDYVFFCGTVDPEDILSSEERVTPLEYDKDHTTDTGRYIIDVRDKVQFDICSLENSINIPISTILASAPSTATKLADEPTPLPSWLPSEIAGDSNNPIYVVCRQGNDSQTAVKRLKELGLDRGGERRIVDIKGGFCSWREQVDPDWPDY

Annotated regions:
phrase: TPLEYDKDHTTDTGRYIIDVRDKVQFDICSLENSINIPISTILASAPSTATKLADEPTPLPSWLPSEIAGDSNNPIYVVCRQGNDSQTAVKRLKELGLDRGGERRIVDIKGGFCSWREQVD
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain

phrase: IIDVRDKVQFDICSLENSINIPISTILASAPSTATKLADEPTPLPSWLPSEIAGDSNNPIYVVCRQGNDSQTAVKRLKELGLDRGGERRIVDIKGGFCSWREQVDPDW
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain

phrase: YGRQMIVPQLGLQGQLKLRDAKVLIVGAGGLGCPAALYLAGAGVGTLGLVDGDTVESSNLHRQVLHRSKNVGKLKVDSAIEYLKEWVSDSWITGRVEYILISIHGLRLNPYSTYIAHRAHLAPQEAPDIFKDYDLILDCTDNPATRYLISDTAVLLGKPLVSASALRTEGQLMVLNNPPRPAGDKTGGPCYRCVFPKPPPANSITSCADGGILGPVVGTMGVLQALEAIKVLTALEGTAEATPPSLLIFSAYSTPQFRTIKLRSRRPNC
type: DOMAIN
name: ThiF_NAD_FAD-bd
description: THIF-type NAD/FAD binding fold

phrase: DTGRYIIDVRDKVQFDICSLENSINIPISTILASAPSTATKLADEPTPLPSWLPSEIAGDSNNPIYVVCRQGNDSQTAVKRLKELGLDRGGERRIVDIKGGFCSWR
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain
Protein sequence:
MADTTVEKLATEVGKSVERLIEQFSQAGIKKGQTDNVSEAEKQQLLDYLKKQHGGESAPTKMTLQRKTVSTLSVAGNGGQSKDVKVEVRKTRTFVKRDVSEAVLKAEEEAKAKAEAEAQAKAEAEAKARAEAEAKAKADAEAKAEAKAKADAEAKAKAKAATDAKTTKDTSPEAEAARVEAERLKAAQAEATKRKQDEEAAKAAEKARLLAEENSKRWDEEERQRKEAERYSDHHITTSKVARAAEDSSDMDEEKRGRRARNKNTAKTKRGGKDARDGREKHMRNRSTAPESMAHGFNKPVAAVTRDVRIGETVTVAELAHLMAVKATEIIKQMMKMGSMVTINQVLDQETAQLVAEEMGHKVVLIRENELEQQVLSERDEEGGVKLEPRAPVVTIMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETENGMITFLDTPGHAAFTAMRARGAKATDIVVLVVAADDGVMPQTIEAIQHAKAGNVPLIVAVNKMDKPEADIDRVKSELAQHGVMSEDWGGDNMFAFVSAKTGAGVDDLLEGILLQAEVLELKAVRDGMAAGVVIESQLDKGRGPVATILVQEGTLRQGDIVLCGLEYGKIRAMKDENGRSITEAGPSIPVEILGLSGVPSAGDEATVVRDERKAREVALYRQGKFRDVKLARQQKSKLENMFANMTEGEVKELNIVLKADVQGSLEAITDSLMGLSTDEVKVNIIARGVGALTETDATLAAASNAIMVGFNVRADAQARKTIESESVDLRYYSVIYNLIDEVKAAMTGMLSPEFKQQIIGLAEVRDVFKSPKLGAIAGCMVTEGTIKRSAPIRVLRDNVVIFEGELESLRRFKDDVNEVRNGMECGIGVKNYNDVRVGDQIEVFETVEVARTL

Annotated regions:
phrase: AAGVVIESQLDKGRGPVATILVQEGTLRQGDIVLCGLEYGKIRAMKDENGRSITEAGPSIPVEILGLSGVPSAGDEAT
type: DOMAIN
name: EF-G-like_DII
description: Elongation factor G-like, domain II

phrase: VVTIMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETENGMITFLDTPGHAAFTAMRARGAKATDIVVLVVAADDGVMPQTIEAIQHAKAGNVPLIVAVNKMDKPEADIDRVKSELAQHGVMSEDWGGDNMFAFVSAKTGAGVDDLLEGI
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: GAIAGCMVTEGTIKRSAPIRVLRDNVVIFEGELESLRRFKDDVNEVRNGMECGIGVKNYNDVRVGDQ
type: DOMAIN
name: EFTu-like_2
description: Translation elongation factor EFTu-like, domain 2

phrase: VVTIMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETENGMITFLDTPGHAAFTAMRARGAKATDIVVLVVAADDGVMPQTIEAIQHAKAGNVPLIVAVNKMDKPEADIDRVKSELAQHGVMSEDWGGDNMFAFVSAKTGAGVDDL
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: PRAPVVTIMGHVDHGKTSLLDYIRRAKVAAGEAGGITQHIGAYHVETENGMITFLDTPGHAAFTAMRARGAKATDIVVLVVAADDGVMPQTIEAIQHAKAGNVPLIVAVNKMDKPEADIDRVKSELAQHGVMSEDWGGDNMFAFVSAKTGAGVDDLLEGILLQAEVLEL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: ETVTVAELAHLMAVKATEIIKQMMKMGSMVTINQVLDQETAQLVAEEMGH
type: DOMAIN
name: IF2_N
description: Translation initiation factor IF-2, N-terminal

phrase: MADTTVEKLATEVGKSVERLIEQFSQAGIKKGQTDNVSEAEKQQLLDYL
type: DOMAIN
name: IF2_N
description: Translation initiation factor IF-2, N-terminal

phrase: PTKMTLQRKTVSTLSVAGNGGQSKDVKVEVRKTRTFVK
type: DOMAIN
name: IF2_assoc_dom_bac
description: Initiation factor 2 associated domain, bacterial

phrase: AAGVVIESQLDKGRGPVATILVQEGTLRQGDIVLCGLEYGKIRAMKDENGRSITEAGPSIPVEILGLSGVPSAGDEATVVRDERKAREVALYR
type: DOMAIN
name: IF2_II
description: Translation initiation factor IF-2, domain II

phrase: KLARQQKSKLENMFANMTEGEVKELNIVLKADVQGSLEAITDSLMGLSTDEVKVNIIARGVGALTETDATLAAASNAIMVGFNVRADAQARKTIESESVDLRYYSVIYNLIDEV
type: DOMAIN
name: TIF_IF2_dom3
description: Translation initiation factor IF- 2, domain 3
Protein sequence:
MPETIENQACIVIAIAGASASGKSLIASTIYKELKEELDSNDIDIISEDAYYKDQTHLTMDEREQTNYDHPDSMVHYLLVEHLRQLKQGKPIQIPEYDYAKHNRKTSSKHFEPKKIIILEGILLLTHETIRNEINVSIFVDAPLDICFIRRLQRDLIERGRSMDSVISQCRKTVRPMFLKFIEPSKQYADIIIPKGGKNRIAIDILKAQIKQLLSKK

Annotated regions:
phrase: VIAIAGASASGKSLIASTIYKELKEELDSNDIDIISEDAYYKDQTHLTMDEREQTNYDHPDSMVHYLLVEHLRQLKQGKPIQIPEYDYAKHNRKTSSKHFEPKKIIILEGILLLTHETIRNEINVSIFVDAPLDICFIRRLQRDLIERGRSMDSVISQCRKTVRPMFLKFIEPSKQYADIIIPKGGKNR
type: DOMAIN
name: PRK/URK
description: Phosphoribulokinase/uridine kinase