nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MNSLGKPPALKPRQLRLPRVCVVVTGSSPAEMLDRAEQLTPQNTFLEFRLDYLAQPLSILPRLQEFLALHRDVVAIATCRRAAAGGKFKGPVAAQAVILEKAVAAGCHLFDIELQSASRIAPAQLAGARERAAMMLSYHDFDATKDLETIFAGMQKIPADYYKLVTTATSLRDNVAMMRFLEQHSDRYAVVGLCMGEQGLISRMLGLRAGSVFTFAAPAPGLGTAPGQIAAHELRSTFRIEQLDAATRVYGVAGNPVAHSLSPVVMNAAMRRESVNAIYLPLHARTLKDLLACMRDIPLQGVSITMPYKESIIEHLENTDPQTSTIGACNTVVRAQDGKFYGFNTDMAGVLRPLEQRIPLPGAKILVLGAGGAARAAVFGLKTRGAEVFILNRTADRAQKLARQAKARTLKRPELLKQRFDAILNATPVGMGRSGHSPLTQEEIRARFVFDFVYDAVETPLLRLARAAGADTIPGIEMFAFQAAAQFEIWTGKPAPVEDMLQTAITARQRAENNKDRSEAGDPVRLRKTRH

Annotated regions:
phrase: DIELQSASRIAPAQLAGARERAAMMLSYH
type: ACTIVE_SITE
name: 3-dehydroquinate_DH_AS
description: 3-dehydroquinate dehydratase, active site

phrase: VAGNPVAHSLSPVVMNAAMRRESVNAIYLPLHARTLKDLLACMRDIPLQGVSITMPYKESIIEHLENTDPQTSTIGACNT
type: DOMAIN
name: Shikimate_DH-bd_N
description: Shikimate dehydrogenase substrate binding, N-terminal

phrase: LPGAKILVLGAGGAARAAVFGLKTRGAEVFILNRTADRAQKLARQAKARTLKRPELLKQRFDAILNA
type: DOMAIN
name: Shikm_DH/Glu-tRNA_Rdtase
description: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase

phrase: GIEMFAFQAAAQFEIWTGKPAPVEDMLQT
type: DOMAIN
name: SDH_C
description: SDH, C-terminal
Protein sequence:
MESPVTDISPAQAPLLNLIGHDRQALEAYFASMGEKAFRATQVLKWVHQQGVYDFSAMTNLSKSLRTSLTSQAAFVVPEIINDQISEDGTRKWLLRLEDGNSIETVFIPESGRGTLCVSSQVGCALNCSFCATARQGFNRNLTAAEIIGQLRLANQLLVSTDNKRPVTNVVMMGMGEPLLNYNNVIQAMTLMQEDFAYGLSKRRVTLSTSGLLPEMQSLSKDCPVSLAVSLHAPDDELRNKLVPINRRYPVLKLMQACRDYTKGLPHQKVTFEYVMLADVNDTDLHARKLAKLVANVPCKINLIPFNPFANSGYKSSPLSRINRFRDILMQNEIMTVTRKTRGEEIAAACGQLSGEFRDRTRRSERFHQIQLAGDLH

Annotated regions:
phrase: NLIGHDRQALEAYFASMGEKAFRATQVLKWVHQQGVYDFSAMTNLSKSLRTSLTSQ
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: SSQVGCALNCSFCATARQGFNRNLTAAEIIGQLRLANQLLVSTDNKRPVTNVVMMGMGEPLLNYNNVIQAMTLMQEDFAYGLSKRRVTLSTSGLLPEMQSLSKDCPVSLAVSLHAPDDELRNKLVPINRRYPVLKLMQACRDYTKGLPHQKVTFEYVMLADVNDTD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: ESGRGTLCVSSQVGCALNCSFCATARQGFNRNLTAAEIIGQLRLANQLLVSTDNKRPVTNVVMMGMGEPLLNYNNVIQAMTLMQEDFAYGLSKRRVTLSTSGLLPEMQSLSKDCPVSLAVSLHAPDDELRNKLVPINRRYPVLKLMQACRDYTKGLPHQKVTFEYVMLADVNDTDLHARKLAKLVANVPCKINLIPFNPFANSGYKSSPLSRINRFRDILMQNEIMTVTRKTRG
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MSTDSIEVAIIGAGITGITLALGLLSRGIPVRVYERARDFHEIGAGIGFTPNAEWAMKVVDPRIQAAFKRVATPNASDWFQWVDGFNESGTDPRETEEQLLFKIYLGERGFEGCHRADFLGELARLLPEGVVTFQKALDTVEPAADNSLGQLLRFQDGTTATAHAVIGCDGIRSRVRQILLGEDHPTASAHYSHKYAARGLIPMDRAREALGEDKVATRFMHLGPDAHALTFPVSHGSLLNVVAFVTDPNPWPYADRWTAQGPKKDVTAAFSRFGPTMRTIIDLLPDPIDQWAVFDTYDHPPNTYSRGAVCIAGDAAHAAAPHHGAGAGCGVEDAAVLCAVLHMAAKKVNTAKTGSEGKAALITAAFETYDSVCRERAQWLVESSRVIGNLCHDEVYWRSHRIWDYDIDAMMRETAEVFEAQVAGVARN

Annotated regions:
phrase: VTFQKALDTVEPAADNSLGQLLRFQDGTTATAHAVIGCDGIRSRVRQILLGEDHPTASAHYSHKYAARGLIPMDRAREALGEDKVATRFMHLGPDAHALTFPVSHGSLLNVVAFVTDPNPWPYADRWTAQGPKKDVTAAFSRFGPTMRTIIDLLPDPIDQWAVFDTYDHPPNTYSRGAVCIAGDAAHAAAPHHGAGAGCGVEDAAVLCAVLHMAA
type: DOMAIN
name: FAD-bd
description: FAD-binding domain
Protein sequence:
MNNHFKCIGIVGHPRHPTALTTHEMLYRWLCDQGYEVIVEQQIAHELQLKNVPTGTLAEIGQQADLAVVVGGDGNMLGAARTLARYDINVIGINRGNLGFLTDLDPDNALQQLSDVLEGRYISEKRFLLEAQVCQQDRQKRISTAINEVVLHPGKVAHMIEFEVYIDETFGFSQRSDGLIISTPTGSTAYSLSAGGPILTPSLDAITLVPMFPHTLSARPLVINSSSTIRLRFSHRRSDLEISCDSQIALPIQEGEDVLIRRCDYHLNLIHPKDYSYFNTLSTKLGWSKKLF

Annotated regions:
Protein sequence:
MDRSSLLQLIQEQQLDPENTGFIGADTFAGLVHSHELPLDPTKLDMLVALAQSNERGQVCYQELVDLISSKRSSSFKRAIANGQRALPRDGLLDEPGLSVYKRFVRYVAYEILPCEVDRRWYFYRHRTCPPPVFMASVTLAQIIVFLCYGARLNKWVLQTYHPEYMKSPLVYHPGHRARAWRFLTYMFMHVGLEQLGFNALLQLMIGVPLEMVHGVLRISLLYLAGVLAGSLTVSITDMRAPVVGGSGGVYALCSAHLANVVMNWAGMRCPYKLLRMVLALVCMSSEVGRAVWLRFSPPLPASGPQPSFMAHLAGAVVGVSMGLTILRSYEERLRDQCGWWVVLLAYGTFLLFAIFWNVFAYDLLGADIPPPP

Annotated regions:
phrase: RAWRFLTYMFMHVGLEQLGFNALLQLMIGVPLEMVHGVLRISLLYLAGVLAGSLTVSITDMRAPVVGGSGGVYALCSAHLANVVMNWAGMRCPYKLLRMVLALVCMSSEVGRAVWLRFSPPLPASGPQPSFMAHLAGAVVGVSMGLTIL
type: DOMAIN
name: Peptidase_S54_rhomboid_dom
description: Peptidase S54, rhomboid domain
Protein sequence:
MAKQSMKAREAKRAKLVTKFAEKRAALKVLISDVNASEEDRWNAVLKLQSLPRDSSASRQRNRCNQTGRPHGYLRKFGLSRIKVREACMKGEIPGLRKASW

Annotated regions:
phrase: RCNQTGRPHGYLRKFGLSRIKV
type: CONSERVED_SITE
name: Ribosomal_uS14_CS
description: Small ribosomal subunit protein uS14, conserved site
Protein sequence:
MLSRPKPGESEVDLLHFQSQFLAAGAAPAVQLVKKGNRGGGDANSDRPPLQDHRDVVMLDNLPDLPPALVPSPPKRARPSPGHCLPEDEDPEERLRRHDQHITAVLTKIIERDTSSVAVNLPVPSGVAFPAVFLRSRDTQGKSATSGKRSIFAQEIAARRIAEAKGPSVGEVVPNVGPPEGAVTCETPTPRNQGCQLPGSSHSFQGPNLVTGKGLRDQEAEQEAQTIHEENIARLQAMAPEEILQEQQRLLAQLDPSLVAFLRSHSHTQEQTGETASEEQRPGGPSANVTKEEPLMSAFASEPRKRDKLEPEAPALALPVTPQKEWLHMDTVELEKLHWTQDLPPVRRQQTQERMQARFSLQGELLAPDVDLPTHLGLHHHGEEAERAGYSLQELFHLTRSQVSQQRALALHVLAQVISRAQAGEFGDRLAGSVLSLLLDAGFLFLLRFSLDDRVDGVIATAIRALRALLVAPGDEELLDSTFSWYHGALTFPLMPSQEDKEDEDEDEECPAGKAKRKSPEEESRPPPDLARHDVIKGLLATSLLPRLRYVLEVTYPGPAVVLDILAVLIRLARHSLESATRVLECPRLIETIVREFLPTSWSPVGAGPTPSLYKVPCATAMKLLRVLASAGRNIAARLLSSFDLRSRLCRIIAEAPQELALPPEEAEMLSTEALRLWAVAASYGQGGYLYRELYPVLMRALQVVPRELSTHPPQPLSMQRIASLLTLLTQLTLAAGSTPAETISDSAEASLSATPSLVTWTQVSGLQPLVEPCLRQTLKLLSRPEMWRAVGPVPVACLLFLGAYYQAWSQQPSSCPEDWLQDMQRLSEELLLPLLSQPTLGSLWDSLRHCSLLCNPLSCVPALEAPPSLVSLGCSGGCPRLSLAGSASPFPFLTALLSLLNTLAQIHKGLCGQLAAILAAPGLQNYFLQCVAPGAAPHLTPFSAWALRHEYHLQYLALALAQKAAALQPLPATHAALYHGMALALLSRLLPGSEYLTHELLLSCVFRLEFLPERTSGGPEAADFSDQLSLGSSRVPRCGQGTLLAQACQDLPSIRNCYLTHCSPARASLLASQALHRGELQRVPTLLLPMPTEPLLPTDWPFLPLIRLYHRASDTPSGLSPTDTMGTAMRVLQWVLVLESWRPQALWAVPPAARLARLMCVFLVDSELFRESPVQHLVAALLAQLCQPQVLPNLNLDCRLPGLTSFPDLYANFLDHFEAVSFGDHLFGALVLLPLQRRFSVTLRLALFGEHVGALRALSLPLTQLPVSLECYTVPPEDNLALLQLYFRTLVTGALRPRWCPVLYAVAVAHVNSFIFSQDPQSSDEVKAARRSMLQKTWLLADEGLRQHLLHYKLPNSTLPEGFELYSQLPPLRQHYLQRLTSTVLQNGVSET

Annotated regions:
phrase: QTIHEENIARLQAMAPEEILQEQQRLLAQLDPSLVAFLRSHS
type: DOMAIN
name: RNA_pol_II_AP1_N
description: RNA polymerase II-associated protein 1, N-terminal

phrase: QARFSLQGELLAPDVDLPTHLGLHHHGEEAERAGYSLQELFHLTRSQVSQQRALALHVLAQVISR
type: DOMAIN
name: RNA_pol_II_AP1_C
description: RNA polymerase II-associated protein 1, C-terminal
Protein sequence:
MNVKIDGRRKINSNVIVPPDKSISHRSIMIGSLANGVTEIENFLFSDDCLATINCFKNLSTDIEIRNDKIIVKGNGFALSAPKQILDCQNSGTTTRLLLGILSTQEFESILTGDSSLKKRPMKRVTVPLSQMGAEFEFLEKEDFLPIKVKGSKKLKPIEYTLPIPSAQVKSALIFASLKAEGKSVIKESPKSRDHTELMLKHAGANIKSWEKDGVYTVEILPSQISSIKIKIPSDISSAAFFIVLALICEGSSVVIENCILNPTRTGIIDVLKQMGAEIKIEDVENRNGELVGKIVARSSNLRGVKVEKNDIPRIIDEIPILAVAAAFAEGKTIIDHASELRVKESDRIKTTVEMLKSFGAECYELENGLEIIGSREKLKSAVVNSYKDHRIAMAASIMACAVEGESTILDADCVSISFPNFYDILFSSTKKI

Annotated regions:
phrase: DGRRKINSNVIVPPDKSISHRSIMIGSLANGVTEIENFLFSDDCLATINCFKNLSTDIEIRNDKIIVKGNGFALSAPKQILDCQNSGTTTRLLLGILSTQEFESILTGDSSLKKRPMKRVTVPLSQMGAEFEFLEKEDFLPIKVKGSKKLKPIEYTLPIPSAQVKSALIFASLKAEGKSVIKESPKSRDHTELMLKHAGANIKSWEKDGVYTVEILPSQISSIKIKIPSDISSAAFFIVLALICEGSSVVIENCILNPTRTGIIDVLKQMGAEIKIEDVENRNGELVGKIVARSSNLRGVKVEKNDIPRIIDEIPILAVAAAFAEGKTIIDHASELRVKESDRIKTTVEMLKSFGAECYELENGLEIIGSREKLKSAVVNSYKDHRIAMAASIMACAVEGESTILDADCVSISFPNFYDI
type: DOMAIN
name: Enolpyruvate_Tfrase_dom
description: Enolpyruvate transferase domain

phrase: LDCQNSGTTTRLLL
type: CONSERVED_SITE
name: EPSP_synthase_CS
description: 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site

phrase: RVKESDRIKTTVEMLKSF
type: CONSERVED_SITE
name: EPSP_synthase_CS
description: 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site
Protein sequence:
MEGLVPVQRLPIKVASPSLYRCNNSVSIRRSISGFAMDRKINFRAPSQFSIRAQQSDLKESLAVSSSSVEDKGNVLRIKEWEVEMYQEELAISQGIRIRRKPPSKAPLGYSGPFELRLHNNDADSPRNILEEITWYKDVEVSRMKELNPLDVLKKAVEDAPPTRDFVGALRMAHKRTGFPGLIAEVKKASPSRGILKENFDPVEIAQAYEKGGAACLSVLTDQKYFQGGFENLEAIRSAGVKCPLLCKEFVVDPWQIYYARTKGADAVLLIAAVLADLEITFLLKICKKLSLAALVEVHDEREMGRVLGIEGIELVGINNRSLETFEVDISNTKKLLEGEHGRQIRERDMIVVGESGLFTPDDIAYVQAAGVKAVLVGESIVKQNDPEKGIAGLFGRNISHT

Annotated regions:
phrase: NILEEITWYKDVEVSRMKELNPLDVLKKAVEDAPPTRDFVGALRMAHKRTGFPGLIAEVKKASPSRGILKENFDPVEIAQAYEKGGAACLSVLTDQKYFQGGFENLEAIRSAGVKCPLLCKEFVVDPWQIYYARTKGADAVLLIAAVLADLEITFLLKICKKLSLAALVEVHDEREMGRVLGIEGIELVGINNRSLETFEVDISNTKKLLEGEHGRQIRERDMIVVGESGLFTPDDIAYVQAAGVKAVLVGESIVKQNDPEKGIAGLF
type: DOMAIN
name: Indole-3-glycerol_P_synth_dom
description: Indole-3-glycerol phosphate synthase domain

phrase: LEEITWYKDVEVSRMKELNPLDVLKKAVEDAPPTRDFVGALRMAHKRTGFPGLIAEVKKASPSRGILKENFDPVEIAQAYEKGGAACLSVLTDQKYFQGGFENLEAIRSAGVKCPLLCKEFVVDPWQIYYARTKGADAVLLIAAVLADLEITFLLKICKKLSLAALVEVHDEREMGRVLGIEGIELVGINNRSLETFEVDISNTKKLLEGEHGRQIRERDMIVVGESGLFTPDDIAYVQAAGVKAVLVGESIVKQNDPEKGI
type: DOMAIN
name: Indole-3-glycerol_P_synth_dom
description: Indole-3-glycerol phosphate synthase domain

phrase: LIAEVKKASPSRGILKEN
type: CONSERVED_SITE
name: Indole-3-GlycerolPSynthase_CS
description: Indole-3-glycerol phosphate synthase, conserved site

phrase: FVGALRMAHKRTGFPGLIAEVKKASPSRGILKENFDPVEIAQAYEKGGAACLSVLTDQKYFQGGFENLEAIRSAGVKCPLLCKEFVVDPWQIYYARTKGADAVLLIAAVLADLEITFLLKICKKLSLAALVEVHDEREMGRVLGIEGIELVGINNRSLETFEVDISNTKKLLEGEHGRQIRERDMIVVGESGLFTPDDIAYVQAAGVKAVLVGESIVKQNDPEKGIAG
type: DOMAIN
name: Indole-3-glycerol_P_synth_dom
description: Indole-3-glycerol phosphate synthase domain
Protein sequence:
MKSVGLVGWRGMVGSVLMQRMSEERDFDAVRPVFFSTSQHGQAAPAFGGQSAGTLQDAFDIEALKALDIIITCQGGDYTSDVYPKLRAAGWQGYWIDAASTLRMEEDAIIILDPVNHQVIQDGLNNGIKTFVGGNCTVSLMLMSLGGLFANNLVEWASVATYQAASGGGARHMRELLAQMGQLHGHVAAELNNPASAILDIERKVTELSRAGALPVDNFGVPLAGSLIPWIDKQLENGQSREEWKGQAETNKILRPAGLIPVDGLCVRVGALRCHSQAFTLKLKKDVPLAEIEQLLASHNDWVKVIPNDREITMRELTPAAVTGTLSTPVGRLRKLNMGPEYLSAFTVGDQLLWGAAEPLRRMLRLLVD

Annotated regions:
phrase: VGLVGWRGMVGSVLMQRMSEERDFDAVRPVFFSTSQHGQAAPAFGGQSAGTLQDAFDIEALKALDIIITCQGGDYTSDVYPKLRAAGWQGYWIDAASTLRMEEDAIIILDPVNHQVI
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: LGGLFANNLVEWASVATYQAASGGGARHMRELLAQMGQLHGHVAAELNNPASAILDIERKVTELSRAGALPVDNFGVPLAGSLIPWIDKQLENGQSREEWKGQAETNKILRPAGLIPVDGLCVRVGALRCHSQAFTLKLKKDVPLAEIEQLLASHNDWVKVIPNDREITMRELTPAAVTGTLSTPVGRLRKLNMGPEYLSAFTVGDQLL
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: SVGLVGWRGMVGSVLMQRMSEERDFDAVRPVFFSTSQHGQAAPAFGGQSAGTLQDAFDIEALKALDIIITCQGGDYTSDVYPKLRAAGWQGYWIDAASTLRMEEDAIIILDPVNHQVIQD
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: VDGLCVRVGALRCH
type: CONSERVED_SITE
name: Asp-semialdehyde_DH_CS
description: Aspartate-semialdehyde dehydrogenase, conserved site
Protein sequence:
MTRKRPALAEPVSSSRSRVTRRSTTGAPSSKKKRSPEPESDADSEDDYDGPSTSQTKKLKRGNSSTNRGKAANKTKRGSFQVKQEIMDDDENEEKIDGEVENGITSREHSPDPSTFKKTAKLQTKKKKKKESPPETPPTSPSPSPSRSVSPSTTKSDISSKKGRKAVVNSVSKVKIEKESTPVKTNGRNLPPKRKKKPVEEETAEEIKLRERAERKARRIEEAKNRPKLTIEQKLAKLRKKKERRERRKEQEKEESMRQKYGQRKIKAEASKWNFGPISSINQRRRDEMMAYFPKANFLAEDGVPKVMNNFRRATVKYNMEVLNPFITCGICDGYIVDATTIIDCMHTFCKSCLLTYFESDNNTCPTCGTFIHGSHPTHYVTYDRAVNELVNQFVPKMENNELDVRKTFLRDCREALGIDTAAEDRERKERLERERITGTNRCYPLERPRFSHHRDDCQVTVNLLPGTANLPLITRPYVRCSEMTTMNTLKKFLSLQIWDDQSRYSDLDMFCDGQLMGKDFSVRFVWMMKRRGQPKSEPLIIRYHMTRT

Annotated regions:
phrase: CGICDGYIVDATTIIDCMHTFCKSCLLTYFESDNNTCPT
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: CGICDGYIVDATTIIDCMHTFCKSCLLTYFESDNNTCPT
type: DOMAIN
name: Znf_C3HC4_RING-type
description: Zinc finger, C3HC4 RING-type

phrase: CGICDGYIVDATTIIDCMHTFCKSCLLTYFESDNNTCPT
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: CMHTFCKSC
type: CONSERVED_SITE
name: Znf_RING_CS
description: Zinc finger, RING-type, conserved site
Protein sequence:
EASEYYPARYQTHMLLASGISEPGDCGGILRCHHGVIGIVTAGGQGVVGFADVRDLFWIEHEAMEQGITDYIQQLGNSFGKGFTDEIAGFASQLREMMVGADGLVEQCLKTFIKVVSAIVIATRSEGDVPTILATLALIGCDGSPWRWLKRQFCSIFKIPYVEKQNDNWLKKFTTYINAFKGLDWVAEKIMKFIDWLKNHLVPQAKERVEFVTNLKSLPLLEAQIATLEHSCPTTEQQETLFGNVQYLAHYCRKLAPLYAAEARRVFALEKRVLGYIQFKNKQRIEPVCLLIHGTAGTGKSLATSIIGRKLAEYENSEVYAIPPDSDHFDGYQQQAVVVLDDLNQNPDGKDMVAFCQMVSTVPYHVPMAALEEKGMLFTSAYVLASTNSGSIHPPTVSNSKALSRRFAYDVDIEVSENYKTPNGTLDVVAATQSCEDCCPVNFKKCMPLVCGEAYQLKDRRTGVRYSIDTMITEMRREWQRRNRVGSVIEALFQGPPTFKPAISKQVSSDTEEQHVFRGIPNFGNTCWFNAIFQLLKSLGIAGHLVQGIVYRFGDFYKRPTPQRVKWLCKLLNIKFGEQHDAVEMLYKIFDVFKCDVIIGYDSSSRLQYVPLGTCKEVPAEAVLMFNGRNGSGHWTAARKLNGEWYVFDDETVMKKDPNWSRVVLVMRSQGYLTADDHTHSKETGVSVAPTNLEQTCTYCQSDSDVKAVFQGPPAFKPLKISVDPETPTPPAIADLLASVDSEEVREYCKKKGWIVEVPVDERKLERN

Annotated regions:
phrase: EASEYYPARYQTHMLLASGISEPGDCGGILRCHHGVIGIVTAGGQGVVGFADVRDLFWIE
type: DOMAIN
name: Peptidase_C3
description: Peptidase C3, picornavirus core protein 2A

phrase: KPLKISVDPETPTPPAIADLLASVDSEEVREYCKKKGWIVEVPVDERKLER
type: DOMAIN
name: P3A
description: Poliovirus 3A protein-like

phrase: QGITDYIQQLGNSFGKGFTDEIAGFASQLREMMVGADGLVEQCLKTFIKVVSAIVIATRSEGDVPTILATLALIGCDGSPWRWLKRQFCSIFKIPYVEK
type: DOMAIN
name: Pico_P2B
description: Picornavirus 2B protein

phrase: EKRVLGYIQFKNKQRIEPVCLLIHGTAGTGKSLATSIIGRKLAEYENSEVYAIPPDSDHFDGYQQQAVVVLDDLNQNPDGKDMVAFCQMVSTVPYHVPMAALEEKGMLFTSAYVLASTNSGSIHPPTVSNSKALSRRFAYDVDIEVSENYKTPNGTLD
type: DOMAIN
name: Helicase_SF3_ssRNA_vir
description: Helicase, superfamily 3, single-stranded RNA virus

phrase: LIHGTAGTGKSLATSIIGRKLAEYENSEVYAIPPDSDHFDGYQQQAVVVLDDLNQNPDGKDMVAFCQMVSTVPYHVPMAALEEKGMLFTSAYVLAST
type: DOMAIN
name: Helicase_SF3_ssDNA/RNA_vir
description: Helicase, superfamily 3, single-stranded DNA/RNA virus

phrase: GIPNFGNTCWFNAIF
type: CONSERVED_SITE
name: USP_CS
description: Ubiquitin specific protease, conserved site

phrase: EPVCLLIHGTAGTGKSLATSIIGRKLAEYENSEVYAIPPDSDHFDGYQQQAVVVLDDLNQNPDGKDMVAFCQMVSTVPYHVPMAALEEKGMLFTSAYVLASTNSGSIHPPTVSNSKALSRRFAYDVDIEVS
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain
Protein sequence:
MRQKTLDVLEFDKIKSFVASETISDLGREKVSKMSPATDFETVEFQMNETDEISQIYNKHRLPSLSGLAKISPLIHRANIGGVLNVTELNLVKRLIQVQNQFKTFYNQLLEEDEQVVKYPILNDKMNQLPILSDLFQEINEKCDTHDLYDSASYELQGIRSKISSTNQRIRQNLDRIVKSQANQKKLSDAIITVRNDRNVIPVKAEYRQDFKGIVHDQSASGQTLYIEPSSIVEMNNQISRLRNDEAVERERILTELTGMVAAEADGCLIAESVMGQIDFLTAKARYARSIKGTKPTFYKDRTVYLPNAYHPLLNKDTVVANTIEFVDDIETVIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGSQLSVFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQETDKNSLVLFDELGAGTDPSEGAALAMSILDHVREIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFDISRKLGLSLGIINKAKTMIGTDEQEINSMIESLEKNSKRVDEQRIELDRLLKEARKTHDDLEHQYEQYKSYEKKLMDEAKEKANQRVKSATKEADSILKELRTLRDQKGADVKEHELIDKKKQLDDQYEAKSLKQNVQKQKYDEIHAGDEVKVLSYGQKGEVLELVSEEEAVVQMGIIKMKLPIEDLEKTKKKKEKPSKMVTRQNRQTIKTELHLRGYRYEEAVSELDQYIDQAVLSNYEQVYIIHGKGTGALQKAVQNHLNKHKSVKSYRGGMPSEGGFGVTVAELK

Annotated regions:
phrase: LEFDKIKSFVASETISDLGREKVSKMSPATDFETVEFQMNETDEISQIYNKHRLPSLSGLAKISPLIHRANIGGVLNVTELNLVKRLIQVQNQFKTFYNQLLEEDEQVVKYPILNDKMNQLPILSDLFQEINEKCDTHDLYDSASYELQGIRSKISSTNQRIRQNLDRIVKSQANQKKLSDAIITVRNDRNVIPVKAEYRQDFKGIVHDQSASGQTLYIEPSSIVEMNNQISRLRNDEAVERERILTELTGMVAAEADGCLIAESVMGQIDFLTAKARYARSIKGTKPTFYKDRTVYLPNAYHPLLNK
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: LHLRGYRYEEAVSELDQYIDQAVLSNYEQVYIIHGKGTGALQKAVQNHLNKHKSVKSYRGGMPSEGGFGVTVAEL
type: DOMAIN
name: Smr_dom
description: Smr domain

phrase: SLVLFDELGAGTDPSE
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: LHLRGYRYEEAVSELDQYIDQAVLSNYEQVYIIHGKGTGALQKAVQNHLNKHKSVKSYRGGMPSEGGFGVTVAEL
type: DOMAIN
name: Smr_dom
description: Smr domain

phrase: AGDEVKVLSYGQKGEVLELVSEEEAVVQMGIIKMKLPIED
type: DOMAIN
name: MSSS
description: MutS2 and Smr-associated SH3 domain

phrase: IETVIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGSQLSVFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQETDKNSLVLFDELGAGTDPSEGAALAMSILDHVREIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFDISRKLGLSLGIINKAKTMI
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: KTELHLRGYRYEEAVSELDQYIDQAVLSNYEQVYIIHGKGTGALQKAVQNHLNKHKSVKSYRGGMPSEGGFGVTVAEL
type: DOMAIN
name: Smr_dom
description: Smr domain

phrase: VIITGPNTGGKTVTLKTLGLIIIMAQSGLLIPTLDGSQLSVFENVYCDIGDEQSIEQSLSTFSSHMKNIVEILQETDKNSLVLFDELGAGTDPSEGAALAMSILDHVREIGSLVMATTHYPELKAYSYNREGVMNASVEFDVNTLSPTYKLLMGVPGRSNAFDISRKLGLSLGIINKAKT
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal
Protein sequence:
MSPSLFLGWGDDYFVVLWIHGRAVRLGRRQGVGRVIRVSLAMLILLALTFSPIVHATCVQTEPSTSANNGSWACSDQGEAFAKASSMGVPADLSVCRMKSIRAVSSGPGVFSQRMTYPGDTCGIGYDLDIGTGNATYPDTATCAKRPSQSGWTNPTAPTPSDVCNDGCYYTYAVDAGGPKGYTYVPSGATCTTDDAAPPIDDGGDGDDDGGGDGGGDGGGDGGGDGGGDGGGDGGGDGGGDGGGDGGGDGDGGGDGDGDGDGDGDGEEGGEGAPMSELYKKSGKTVESVLSKFNTQVRGTPMVAGIGDFMKVPSGGSCPVFSLGASKWWDAMTINFHCGGDFLAFLRAAGWVILAIAAYAAIRIAVT

Annotated regions:
Protein sequence:
MPIIIDKDLPARKVLQEENIFVMTKERAETQDIRALKIAILNLMPTKQETEAQLLRLIGNTPLQLDVHLLHMESHLSRNVAQEHLTSFYKTFRDIENEKFDGLIITGAPVETLSFEEVDYWEELKRIMEYSKTNVTSTLHICWGAQAGLYHHYGVPKYPLKEKMFGVFEHEVREQHVKLLQGFDELFFAPHSRHTEVRENDIRGVKELTLLANSEEAGVHLVIGPEGRQVFALGHSEYSCDTLKQEYERDRQKGLNIDVPKNYFKHNNPNEKPLVRWRSHGNLLFSNWLNYYVYQETPYVL

Annotated regions:
Protein sequence:
MFTINAEVRNEQGKGASRRLRTANKFPAIIYGGNEAPLAVALDHDKVMNMQVKAEFYSEVLTIVVDGKEIKVKAQDVQRHPYKPKLLHIDFVRA

Annotated regions:
phrase: INAEVRNEQGKGASRRLRTANKFPAIIYGGNEAPLAVALDHDKVMNMQVKAEFYSEVLTIVVDGKEIKVKAQDVQRHPYKPKLLHID
type: DOMAIN
name: Ribosomal_L25_dom
description: Large ribosomal subunit protein bL25, L25 domain

phrase: TINAEVRNEQGKGASRRLRTANKFPAIIYGGNEAPLAVALDHDKVMNMQVKAEFYSEVLTIVVDGKEIKVKAQDVQRHPYKPKLLHIDFV
type: DOMAIN
name: Ribosomal_L25_dom
description: Large ribosomal subunit protein bL25, L25 domain
Protein sequence:
MPKMKTKSSAKKRFKITASGKVKVAAAGKRHGMIKRSNKFIRDARGTMVLSEQDAKKVIQHYLPNGL

Annotated regions:
phrase: KTKSSAKKRFKITASGKVKVAAAGKR
type: CONSERVED_SITE
name: Ribosomal_bL35_CS
description: Large ribosomal subunit protein bL35, conserved site
Protein sequence:
MSNLLNKFADKLHGNDHDERYEDDNDDQTRQQRHEKHQQREFRNQGSKADPYGEENQGNFPQRQQPQSNLGGNTQFGGNDFQQQTTDYTAGTGGGTYTQTYRETNTQGQLDDDEDDDFLTSGQQQKQGRTRGAQSNRYQSSNIGSGRRDLSGSGNDEYDDDSGNQGVW

Annotated regions:
Protein sequence:
MELFDLTIHELHDRLKRKELSSVEATRAMLARIEAVDPKVNAYITVTPEEALAAAEAADRRIAAGDMAPLTGIPVALKDIFVTKGIRTTCASKILDNFVPPYDGTAVAKLKEAGAVIVGKLNQDEFAMGSSGESSAFGPTRNPWNLECIPGGSSSGSAAAIAARTATATLGTDTGGSIRQPASHCGCVGLRPTYGRVSRYGVIAYASSLDQVGPVTRDVTDCALMLQAVAGHDPMDSTSVEVPVPDYAKGLTGDVKGLKLGLPKEYYIEGLDPDVKKALDEAIETYRGLGAEFVDISLPHTDYAVATYYLIATAEASSNLARYEGVRFGHRTEGAANLIDMFRKTRSEGFGDEVKRRIMIGTYALSSGYYDAYYLKAQKVRTLIMQDFLKAFEAVDAILTPVAPTPAFKIGEKTSDPLRMYLSDIFTIPVNLAGTCAVSVPAGMSGAGLPIGLQLIGRPFGEETILRAAHAFEQATAWHTQKAGI

Annotated regions:
phrase: EATRAMLARIEAVDPKVNAYITVTPEEALAAAEAADRRIAAGDMAPLTGIPVALKDIFVTKGIRTTCASKILDNFVPPYDGTAVAKLKEAGAVIVGKLNQDEFAMGSSGESSAFGPTRNPWNLECIPGGSSSGSAAAIAARTATATLGTDTGGSIRQPASHCGCVGLRPTYGRVSRYGVIAYASSLDQVGPVTRDVTDCALMLQAVAGHDPMDSTSVEVPVPDYAKGLTGDVKGLKLGLPKEYYIEGLDPDVKKALDEAIETYRGLGAEFVDISLPHTDYAVATYYLIATAEASSNLARYEGVRFGHRTEGAANLIDMFRKTRSEGFGDEVKRRIMIGTYALSSGYYDAYYLKAQKVRTLIMQDFLKAFEAVDAILTPVAPTPAFKIGEKTSDPLRMYLSDIFTIPVNLAGTCAVSVPAGMSGAGLPIGLQLIGRPFGEETI
type: DOMAIN
name: Amidase_dom
description: Amidase signature domain

phrase: GGSSSGSAAAIAARTATATLGTDTGGSIRQP
type: CONSERVED_SITE
name: Amidase_CS
description: Amidase, conserved site
Protein sequence:
MNKAPHETRVVVGMSGGVDSSVAALLLKEQGYDVIGIFMKNWDDTDENGVCTATEDYEDVVRVCNQIGIPYYAVNFEKQYWDKVFTYFLNEYKAGRTPNPDVMCNKEIKFKAFLEHAMSIGADYIATGHYARVEFRDGEYKMLRGADPNKDQTYFLNQLGQAQLSKVMFPIGHLQKADVRRIAKEAGLATAGKKDSTGICFIGERDFKEFLSHYLPAQPGVMKTLDGEVKGRHDGVMYYTIGQRHGLGIGGSGEPWFVVGKDVRENVLYVAQGFENEYLYSTSLKAVDVNWVSDRKPEAPFRCTAKFRYRQPDVGVTVHPLADGGAEVVFDAPARAVTPGQAVVFYNGEECLGGGTIDEVFRNGEKLWYVG

Annotated regions:
phrase: KEFLSHYLPAQPGVMKTLDGEVKGRHDGVMYYTIGQRHGLGIGGSGEPWFVVGKDVRENVLYVA
type: DOMAIN
name: MnmA-like_central
description: tRNA-specific 2-thiouridylase MnmA-like, central domain

phrase: TSLKAVDVNWVSDRKPEAPFRCTAKFRYRQPDVGVTVHPLADGGAEVVFDAPARAVTPGQAVVFYNGEECLGGGT
type: DOMAIN
name: MnmA-like_C
description: tRNA-specific 2-thiouridylase MnmA-like, C-terminal domain
Protein sequence:
MTRVVLAAAYRTPIGVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEIDEVIIGNVLQAGQGQNPARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMSQSPMLVNNSRFGFKMGHQSMVDSMVYDGLTDVFNQYHMGITAENLAEQYGISREEQDTFAVNSQQKAVRAQQNGEFDSEIVPVSIPQRKGEPIVVTKDEGVRENVSVEKLSRLRPAFKKDGTVTAGNASGINDGAAMMLVMSEDKAKELNIEPLAVLDGFGSHGVDPSIMGIAPVGAVEKALKRSKKELSDIDVFELNEAFAAQSLAVDRELKLPPEKVNVKGGAIALGHPIGASGARVLVTLLHQLNDEVETGLTSLCIGGGQAIAAVVSKYK

Annotated regions:
phrase: VNKVCGSGLKSIQLAYQS
type: ACTIVE_SITE
name: Thiolase_acyl_enz_int_AS
description: Thiolase, acyl-enzyme intermediate active site

phrase: EPLAVLDGFGSHGVDPSIMGIAPVGAVEKALKRSKKELSDIDVFELNEAFAAQSLAVDRELKLPPEKVNVKGGAIALGHPIGASGARVLVTLLHQLNDEVETGLTSLCIGGGQAIAAVV
type: DOMAIN
name: Thiolase_C
description: Thiolase, C-terminal

phrase: NVKGGAIALGHPIGAS
type: CONSERVED_SITE
name: Thiolase_CS
description: Thiolase, conserved site

phrase: GLTSLCIGGGQAI
type: ACTIVE_SITE
name: Thiolase_AS
description: Thiolase, active site

phrase: VVLAAAYRTPIGVFGGAFKDVPAYDLGATLIEHIIKETGLNPSEIDEVIIGNVLQAGQGQNPARIAAMKGGLPETVPAFTVNKVCGSGLKSIQLAYQSIVTGENDIVLAGGMENMSQSPMLVNNSRFGFKMGHQSMVDSMVYDGLTDVFNQYHMGITAENLAEQYGISREEQDTFAVNSQQKAVRAQQNGEFDSEIVPVSIPQRKGEPIVVTKDEGVRENVSVEKLSRLRPAFKKDGTVTAGNASGINDGAAMMLVMSE
type: DOMAIN
name: Thiolase_N
description: Thiolase, N-terminal
Protein sequence:
MAEKETPAIILQFAPLNSSVDEGFWHSFSSLKLDKLGIDDSPISITGFYGPCGHPQVSNHLTLLSESLPLDEQSLIASTSHGNRNKCPVPGILYNTNTVESFNKLDKQSLLKAEANKIWEDIQSGKALEDPSVLPRFLVISFADLKKWSFRYWFAFPAFVLDPPVSLIELKPASEYFSSEEAESVSAACNDWRDSDLTTDVPFFLVSVSSDSKASIRHLKDLEACQGDHQKLLFGFYDPCHLPSNPGWPLRNYLALIRSRWNLETVWFFCYRESRGFADLNLSLVGQASITLSSGESAETVPNSVGWELNKGKRVPRSISLANSMDPTRLAVSAVDLNLKLMRWRALPSLNLNVLSSVKCLLLGAGTLGCQVARTLMGWGIRNITFVDYGKVAMSNPVRQSLYNFEDCLGRGEFKAVAAVKSLKQIFPAMETSGVVMAIPMPGHPISSQEEDSVLGDCKRLSELIESHDAVFLLTDTRESRWLPSLLCANANKIAINAALGFDSYMVMRHGAGPTSLSDDMQNLDINKTNTQRLGCYFCNDVVAPQDSMTDRTLDQQCTVTRPGLAPIAGALAVELLVGVLQHPLGINAKGDNSSLSNTGNNDDSPLGILPHQIRGSVSQFSQITLLGQASNSCTACSETVISEYRERGNSFILEAINHPTYLEDLTGLTELKKAANSFNLDWEDDDTDDDDVAVDL

Annotated regions:
phrase: RWRALPSLNLNVLSSVKCLLLGAGTLGCQVARTLMGWGIRNITFVDYGKVAMSNPVRQSLYNFEDCLGRGEFKAVAAVKSLKQIFPAMETSGVVMAIPMPGHPISSQEEDSVLGDCKRLSELIESHDAVFLLTDTRESRWLPSLLCANANKIAINAALGFDSYMVMRHGAGPTSLSDDMQNLDINKTNTQRLGCYFCNDVVAPQDSMTDRTLDQQCTVTRPGLAPIAGALAVELLVGVLQ
type: DOMAIN
name: ThiF_NAD_FAD-bd
description: THIF-type NAD/FAD binding fold

phrase: LQFAPLNSSVDEGFWHSFSSLKLDKLGIDDSPISITGFYGPCGHPQVSNHLTLLSESLPLDEQSLIASTSHGNRNKCPVPGILYNTNTVESFNKLDKQSLLKAEANKIWEDIQSGKALEDPSVLPRFLVISFADLKKWSFRYWFAFPAFVLDPPVSLIELKPASEYFSSEEAESVSAACNDWRDSDLTTDVPFFLVSVSSDSKASIRHLKDLEACQGDHQKLLFGFYDPCHLPSNPGWPLRNYLALIRSRWNLETVWFFCYRESRGFADLNLSLVGQASITLSSGESAETVPNSVGWELNKGKRVPRSISLANS
type: DOMAIN
name: Atg7_N
description: Ubiquitin-like modifier-activating enzyme Atg7, N-terminal
Protein sequence:
MTSDDAAAGLVRVLDAAQGAFLALDSYGGNDRSRAVLAMAEALERSFAQILEANTLDLVVSREMSVADCLCEWLKLTPERLQNTVTILKRLASLPDPLQRVMASPYQFNLAQTYCQLMPLGVVALVYESFPELAAIAAGFCLKTGNSLVLRSCGASSHSTAAICEILREGLLDADLPVDSVSHIPSETSPNVQDLVGNASQLNLVIPYGRPSFVEQISQQCTPPVLKAAMGNCYLYWSSKGDLEMVRQMIIDSHVGHPDPVNAIEKVLVSPGQNPAPLVRLLNNLQAKGFKLRGDAELCEQFPDHLTLAKENEWGKAYLDRTVAFRTTQNLKTAIAWINSHSSGHGDCIATDSYQESRQFSMGVDSALVYVNIPPYFCRNPRHGESLFLGVSSQKGQRRGLIGLEAFMTPKQIVQGESRS

Annotated regions:
phrase: VRVLDAAQGAFLALDSYGGNDRSRAVLAMAEALERSFAQILEANTLDLVVSREMSVADCLCEWLKLTPERLQNTVTILKRLASLPDPLQRVMASPYQFNLAQTYCQLMPLGVVALVYESFPELAAIAAGFCLKTGNSLVLRSCGASSHSTAAICEILREGLLDADLPVDSVSHIPSETSPNVQDLVGNASQLNLVIPYGRPSFVEQISQQCTPP
type: DOMAIN
name: Aldehyde_DH_dom
description: Aldehyde dehydrogenase domain

phrase: GLVRVLDAAQGAFLALDSYGGNDRSRAVLAMAEALERSFAQILEANTLDLVVSREMSVADCLCEWLKLTPERLQNTVTILKRLASLPDPLQRVMASPYQFNLAQTYCQLMPLGVVALVYESFPELAAIAAGFCLKTGNSLVLRSCGASSHSTAAICEILREGLLDADLPVDSVSHIPSETSPNVQDLVGNASQLNLVIPYGRPSFVEQISQQCTPPVLKAAMGNCYLYWSSKGDLEMVRQMIIDSHVGHPDPVNAIEKVLVSPGQNPAPLVRLLNNLQAKGFKLRGDAELCEQFPDHLTLAKENEWGKAYLDRTVAFRTTQNLKTAIAWINSHSSGHGDCIATDSYQESRQFSMGVDSALVYVNIPPYFCRNPRHGESLFLGVSSQKGQRRGLIGLEAFMTPKQIVQGES
type: DOMAIN
name: GPR_dom
description: GPR domain

phrase: VRVLDAAQGAFLALDSYGGNDRSRAVLAMAEALERSFAQILEANTLDLVVSREMSVADCLCEWLKLTPERLQNTVTILKRLASLPDPLQRVMASPYQFNLAQTYCQLMPLGVVALVYESFPELAAIAAGFCLKTGNSLVLRSCGASSHSTAAICEILREGLLDADLPVDSVSHIPSETSPNVQDLVGNASQLNLVIPYGRPSFVEQISQQCTPPVLKAAMGNCYLYWSSKGDLEMVRQMIIDSHVGHPDPVNAIEKVLVSPGQNPAPLVRLLNNLQAKGFKLRGDAELCEQFPDHLTLAKENEWGKAYLDRTVAFRTTQNLKTAIAWINSHSSGHGDCIATDSYQESRQFSMGVDSALVYVNIPPYFCRNPRHGESLFLGVSSQKGQRRGLIGLEAFMTPKQIVQG
type: DOMAIN
name: GPR_dom
description: GPR domain