nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MADSMETHKFKVIIVGGSIAGLTLAHSLSKANIDHIVIEKRAEIAPQEGAFIGVWPNGAQILDQLGLYQSLEELTAPISRMHLSFPDDYSFSSFLPKTIHERFKYPIVSLDRQKVLEILFQNYPDKSNIITNQRVSEVRLLGDSASVVTEDGSVFRGDLIVGADGVHSPLTVEYACVFGISRPIPGLRSGEHINHYGDKFCVITFHGKDGRVFWFIIQKLDRVYTYPNAPRYSPNDAADLCGKMQNVVIWQDITVGDLWKTKVVASMTALEEGIFETWSLNRIVILGDSVHKMTPNIGQGANTAIEDVAVLASLINRMIHADDLNKPSESCIETMLQEYKSLRYEPAKSTYQRSRFGARFHTRDSWLKAVVGRYVFQYVGGLIENRTIKTLAGGDTIDFLPRPDRLETGRVAQFQKSEESPQRQWTLLWVSSLALFLFFPWLGSYLHSTIS

Annotated regions:
phrase: LEEGIFETWSLNRIVILGDSVHKMTPNIGQGANTAIEDVAVLASLINR
type: DOMAIN
name: FAD-bd
description: FAD-binding domain

phrase: FKVIIVGGSIAGLTLAHSLSKANIDHIVIEKRAEIAPQEGAFIGVWPNGAQILDQLGLYQSLEELTAPISRMHLSFPDDYSFSSFLPKTIHERFKYPIVSLDRQKVLEILFQNYPDKSNIITNQRVSEVRLLGDSASVVTEDGSVFRGDLIVGADGVHSP
type: DOMAIN
name: FAD-bd
description: FAD-binding domain
Protein sequence:
MGGKWSKSSIVGWPKVRERIRQTPPAARGVGAASQDLDRRGAITINNTTESNADCAWLEAQEEGEVGFPVRPQVPLRPMTYKGALDLSHFLKEKGGLEGLIYSKKRQEILDLWVYHTQGFFPDWQNYTPGPGTRYPLTLGWCFKLEPMDPAEVEKANEGENNNLLHPICQHGMEDEDREVLVWRFDSSLAFRHRARELYPEFYKDC

Annotated regions:
Protein sequence:
MTQETKYNVAVVGATGAVGQKIIELLQGKSFPINNLKLLSSKRSAGSAVTVNGKEIIVEEATPESFEGVDIALFSAGGSVSKQLAPEAVKRGAVVVDNTSAYRMDPDVPLVVPEVNPEDLKNHQGIIANPNCSTIQMVAALQPIKEKYGLNKVIVSTYQAVSGAGNEAIDELKTQSQQQLNGEALEANLLPVKGDEKHYPIAFNALPQIDVFQENGYTFEEMKMINETKKILHDDALHVAATCVRLPFVTSHAESVYVELEEAGVQVKDIWNLLESADGIILEDDPTNQTYPTPLSAEGKEEVFVGRVRKDLDEDKGFHLWVVSDNLLKGAAWNTVQIAQTLIEKDWLKK

Annotated regions:
phrase: LQPIKEKYGLNKVIVSTYQAVSGAGNEAIDELKTQSQQQLNGEALEANLLPVKGDEKHYPIAFNALPQIDVFQENGYTFEEMKMINETKKILHDDALHVAATCVRLPFVTSHAESVYVELEEAGVQVKDIWNLLESADGIILEDDPTNQTYPTPLSAEGKEEVFVGRVRKDLDEDKGFHLWVVSDNLL
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: VAATCVRLPFVTSH
type: CONSERVED_SITE
name: Asp-semialdehyde_DH_CS
description: Aspartate-semialdehyde dehydrogenase, conserved site

phrase: NVAVVGATGAVGQKIIELLQGKSFPINNLKLLSSKRSAGSAVTVNGKEIIVEEATPESFEGVDIALFSAGGSVSKQLAPEAVKRGAVVVDNTSAYRMDPDVPLVVPEVNPEDLKN
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: NVAVVGATGAVGQKIIELLQGKSFPINNLKLLSSKRSAGSAVTVNGKEIIVEEATPESFEGVDIALFSAGGSVSKQLAPEAVKRGAVVVDNTSAYRMDPDVPLVVPEVNPEDLKN
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MKHRPVHERQCSTETKNWKENTQLIMQSSSGHTHHQPGSNDSPSVCMSLPVPQLSAEGSCTAGDVTIDLSSPESHHGARSSSRRVRPGNGRSLSRHGHTHSHDANGPEDANDADSREQSNSISEVFHFYKWLEKSFPYILIFSAKLVVQHITGISVGIGLLTTFLYANKCIVNQVFLRDKCSKLQCLWILVFLLFSSLLLYYTFSSQALYYSLVFMNPSLGPLHFFDALWVVGITDFIGKFFFMGLKCIILLVPSFVMSHKSKGYWYMALEEVAQCYCMLVSTPVWFRYLIDYGNQNSGAEWHFGILLALLYLILKLLIIFGQRKTSSNSLRLFLTQPNYGAAATKSQCSEVDGMCAICQAEFIKPIVLVCQHVFCEECISLWFNKEKTCPLCRTVISNQSHKWKDGATSLQLRIF

Annotated regions:
phrase: CAICQAEFIKPIVLVCQHVFCEECISLWFNKEKTCPL
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: CQHVFCEEC
type: CONSERVED_SITE
name: Znf_RING_CS
description: Zinc finger, RING-type, conserved site

phrase: MCAICQAEFIKPIVLVCQHVFCEECISLWFNKEKTCPLC
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: CAICQAEFIKPIVLVCQHVFCEECISLWFNKEKTCPLC
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type
Protein sequence:
MGGKWSKRSIVGWPAVRERMRQTPVAADGVGAVSQDLARHGAVTSRNTATNNPDCAWLEAQQEESEVGFPVRPQVPLRPMTYKAAVDLSHFLKEKGGLDGLTYSKQRQDILDLWVYNTQGYFPDWQNYTPGPGVRYPLTFGWCYKLVPVDPQEVEEANKGENSSLLHPICQHGMEDGDGEVLKWVFDSRLALKHLARETHPEFYKDC

Annotated regions:
Protein sequence:
MSNLILEKKWTKWYPENISFKNTKKIKKILCSSNNFKKEDFFIDKKNQKDLTFSKETSEINLTQKKAYETGFQTGLLKGKEENTLLKNKLNDLFLNFENSLAKFENELCSQLLKTVLKISSYVIGKKIDIDKQILLNYIKKIINKEGVFLKKPQFIIHPKNKTLIEDIFKKFLNSHKWTIVCDDGIDLNGCKIKSESVDIDATVDARWQQLCRLIYLEEY

Annotated regions:
phrase: KNKLNDLFLNFENSLAKFENELCSQLLKTVLKISSYVIGKKIDIDKQILLNYIKKIINKEGVFLKKPQFIIHPKNKTLIEDIFKKFLNSHKWTIVCDDGIDLNGCKIKSESVDIDATVDARWQQ
type: DOMAIN
name: Flagellar_FliH/T3SS_HrpE
description: Flagellar assembly protein FliH/Type III secretion system HrpE
Protein sequence:
MAEKKEKVKPTEQQKARLENTYKDKVVPALMERFKYKNIMMVPRLTKISVNIGVGEAAAEPKLLETAIQELSQITGQKPQIRKARKAISNFKLREGQAIGCRVTMRKKYMYEFLERFVTLAVPRIRDFRGLSTTSFDGRGNYSVGVREQIIFPEIDIDKVPRIQGMDISFVTTAKTDEEAFALLSELGMPFRKKNN

Annotated regions:
phrase: NIMMVPRLTKISVNIGVGEAAAEPKLLETAIQELSQITGQKPQIRKARKAISNFKL
type: DOMAIN
name: Ribosomal_uL5_N
description: Large ribosomal subunit protein uL5, N-terminal

phrase: IGCRVTMRKKYMYEFLERFVTLAVPRIRDFRGLSTTSFDGRGNYSVGVREQIIFPEIDIDKVPRIQGMDISFVTTAKTDEEAFALLSELGMP
type: DOMAIN
name: Ribosomal_uL5_C
description: Large ribosomal subunit protein uL5, C-terminal
Protein sequence:
MGAYETEKPTKDAAALETQSPEDFDQPSPLRKIISVASIAAGVQFGWALQLSLLTPYVQLLGIPHKWSSLIWLCGPVSGMIVQPIVGFHSDRCRSKFGRRRPFIATGAALVAVAVFLIGYAADFGYKMGDKLEEKVKVRAIGIFALGFWILDVANNTLQGPCRAFLADLAAGDAKRTRVANAFFSFFMAVGNVLGYAAGSYTNLHKMFPFTMTKACDIYCANLKTCFFLSITLLLIVTVTSLWYVNDKQWSPPPRNADDDEKTSSVPLFGEIFGAFKVMKRPMWMLLIVTALNWIAWFPFLLFDTDWMGREVFGGDSDGNERSKKLYSLGVQSGAMGLMFNSIVLGFMSLGVEWIGRKLGGAKRLWGIVNFILAAGLAMTVLVTKFAEDHRKTAGDLAGPSASVKAGALSLFAVLGIPLAITFSTPFALASIFSSCSGAGQGLSLGVLNLAIVIPQMIVSLGGGPFDALFGGGNLPAFIVAAIAAAISGVLALTVLPSPPPDAPKATTMGGFH

Annotated regions:
Protein sequence:
MLMIRQRTTARPEWDAELELSLEARSKSRLRCFTTAGEDVGLFLERGQPPLADGDFLLADDGRLVRVRARPERLLHVACANAFELTRAAYHLGNRHVALQIGDGWLRLLDDYVLEDMLRQLGARVETVEAPFQPEHGAYGGGHHHSHGGEAEFSYAPKLHQFGVRK

Annotated regions:
phrase: ERLLHVACANAFELTRAAYHLGNRHVALQIGDGWLRLLDDYVLEDMLRQLGARVETVEAPFQPEHGAYGGGHHHSH
type: DOMAIN
name: UreE_C_dom
description: Urease accessory protein UreE, C-terminal domain

phrase: MLMIRQRTTARPEWDAELELSLEARSKSRLRCFTTAGEDVGLFLERGQPPLADGDFLLADDGRL
type: DOMAIN
name: UreE_N
description: UreE urease accessory, N-terminal

phrase: RQRTTARPEWDAELELSLEARSKSRLRCFTTAGEDVGLFLERGQPPLADGDFLLADDGRL
type: DOMAIN
name: UreE_N
description: UreE urease accessory, N-terminal
Protein sequence:
MAGYLSPAAYLYVEEQEYLQAYEDVLERYKDERDKVQKKTFTKWINQHLMKVRKHVNDLYEDLRDGHNLISLLEVLSGDTLPREKGRMRFHRLQNVQIALDYLKRRQVKLVNIRNDDITDGNPKLTLGLIWTIILHFQISDIHVTGESEDMSAKERLLLWTQQATEGYAGIRCENFTTCWRDGKLFNAIIHKYRPDLIDMNTVAVQSNLANLEHAFYVAEKIGVIRLLDPEDVDVSSPDEKSVITYVSSLYDAFPKVPEGGEGIGANDVEVKWIEYQNMVNYLIQWIRHHVTTMSERTFPNNPVELKALYNQYLQFKETEIPPKETEKSKIKRLYKLLEIWIEFGRIKLLQGYHPNDIEKEWGKLIIAMLEREKALRPEVERLEMLQQIANRVQRDSVICEDKLILAGNALQSDSKRLESGVQFQNEAEIAGYILECENLLRQHVIDVQILIDGKYYQADQLVQRVAKLRDEIMALRNECSSVYSKGRILTTEQTKLMISGITQSLNSGFAQTLHPSLTSGLTQSLTPSLTSSSMTSGLSSGMTSRLTPSVTPAYTPGFPSGLVPNFSSGVEPNSLQTLKLMQIRKPLLKSSLLDQNLTEEEINMKFVQDLLNWVDEMQVQLDRTEWGSDLPSVESHLENHKNVHRAIEEFESSLKEAKISEIQMTAPLKLTYAEKLHRLESQYAKLLNTSRNQERHLDTLHNFVSRATNELIWLNEKEEEEVAYDWSERNTNIARKKDYHAELMRELDQKEENIKSVQEIAEQLLLE

Annotated regions:
phrase: AKERLLLWTQQATEGYAGIRCENFTTCWRDGKLFNAIIHKYRPDLIDMNTVAVQSNLANLEHAFYVAEKIGVIRLLDPEDVDVSSPDEKSVITYVSS
type: DOMAIN
name: CH_dom
description: Calponin homology domain

phrase: QKKTFTKWINQHLMKVRKHVNDLYEDLRDGHNLISLLEVLSGDTLPREKGRMRFHRLQNVQIALDYLKRRQVKLVNIRNDDITDGNPKLTLGLIWTIIL
type: DOMAIN
name: CH_dom
description: Calponin homology domain

phrase: EINMKFVQDLLNWVDEMQVQLDRTEWGSDLPSVESHLENHKNVHRAIEEFESSLKEAKISEIQMTAPLKLTYAEKLHRLESQYAKLLNTSRNQERHL
type: REPEAT
name: Spectrin/alpha-actinin
description: Spectrin/alpha-actinin

phrase: RLEMLQQIANRVQRDSVICEDKLILAGNALQSDSKRLESGVQFQNEAEIAGYILECENLLRQHVIDVQILIDGKYYQADQLVQRVAKLRDEIMALRN
type: REPEAT
name: PCN-like_spectrin-like_rpt
description: Plectin-like, spectrin-like repeat

phrase: VQKKTFTKWINQHLMKVRKHVNDLYEDLRDGHNLISLLEVLSGDTLPREKGRMRFHRLQNVQIALDYLKRRQVKLVNIRNDDITDGNPKLTLGLIWTIILHF
type: DOMAIN
name: CH_dom
description: Calponin homology domain

phrase: SAKERLLLWTQQATEGYAGIRCENFTTCWRDGKLFNAIIHKYRPDLIDMNTVAVQSNLANLEHAFYVAEKIGVIRLLDPEDVDVSSPDEKSVITYVSSLYDAF
type: DOMAIN
name: CH_dom
description: Calponin homology domain

phrase: VQDLLNWVDEMQVQLDRTEWGSDLPSVESHLENHKNVHRAIEEFESSLKEAKISEIQMTAPLKLTYAEKLHRLESQYAKLLNTSRNQERHLDTLHNFVSRATNELIWLNEKEEEEVAYDWSERNTNIARKKDYHAELMRELDQKEENIKSVQEIAEQL
type: REPEAT
name: Spectrin/alpha-actinin
description: Spectrin/alpha-actinin

phrase: KVQKKTFTKWINQHLMKVRKHVNDLYEDLRDGHNLISLLEVLSGDTLPREKGRMRFHRLQNVQIALDYLKRRQVKLVNIRNDDITDGNPKLTLGLIWTIILHF
type: DOMAIN
name: CH_dom
description: Calponin homology domain

phrase: MSAKERLLLWTQQATEGYAGIRCENFTTCWRDGKLFNAIIHKYRPDLIDMNTVAVQSNLANLEHAFYVAEKIGVIRLLDPEDVDVSSPDEKSVITYVSSLYDAF
type: DOMAIN
name: CH_dom
description: Calponin homology domain

phrase: LVNIRNDDITDGNPKLTLGLIWTI
type: CONSERVED_SITE
name: Actinin_actin-bd_CS
description: Actinin-type actin-binding domain, conserved site

phrase: QKKTFTKWI
type: CONSERVED_SITE
name: Actinin_actin-bd_CS
description: Actinin-type actin-binding domain, conserved site
Protein sequence:
MEQSAPLRDIRSLTHEELRSLVAELGQPAFRAKQLIEWLGEKQATSFDEMTNLPKALRASLAERFSFNIPVEVAKQVSRDGSRKYLLQFTDGVAVETVGMPSRGKLAVCVSSQAGCGMRCSFCATGLAGLTRSLTAQEIVDQVIHVGRDFGERVTSVVFMGQGEPFANYNEVVKALRMLNSPEGLNIGARHLTVSTCGIIPAIRDFAKLPEQFTLAISLHSAVQATRNQLMPGVKKFTLLRLHEALQDYVEKTGRRPTYEYAMIDGINDTNPEMLTLCDFCEGTLCHVNLIQLNYIPDSPFRPSPVEKVEKLQNMLASRGIEATIRNSRGSDIDAACGQLKQRIINAR

Annotated regions:
phrase: IRSLTHEELRSLVAELGQPAFRAKQLIEWLGEKQATSFDEMTNLPKALRASLAER
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: SSQAGCGMRCSFCATGLAGLTRSLTAQEIVDQVIHVGRDFGERVTSVVFMGQGEPFANYNEVVKALRMLNSPEGLNIGARHLTVSTCGIIPAIRDFAKLPEQFTLAISLHSAVQATRNQLMPGVKKFTLLRLHEALQDYVEKTGRRPTYEYAMIDGINDT
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SRGKLAVCVSSQAGCGMRCSFCATGLAGLTRSLTAQEIVDQVIHVGRDFGERVTSVVFMGQGEPFANYNEVVKALRMLNSPEGLNIGARHLTVSTCGIIPAIRDFAKLPEQFTLAISLHSAVQATRNQLMPGVKKFTLLRLHEALQDYVEKTGRRPTYEYAMIDGINDTNPEMLTLCDFCEGTLCHVNLIQLNYIPDSPFRPSPVEKVEKLQNMLASRGIEATIRNSRGS
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: PLRDIRSLTHEELRSLVAELGQPAFRAKQLIEWLGEKQATSFDEMTNLPKALRASLAERFSFNIPVEVAKQVSRDGSRKYLLQFTDGVAVETVGMPSRGKLAVCVSSQAGCGMRCSFCATGLAGLTRSLTAQEIVDQVIHVGRDFGERVTSVVFMGQGEPFANYNEVVKALRMLNSPEGLNIGARHLTVSTCGIIPAIRDFAKLPEQFTLAISLHSAVQATRNQLMPGVKKFTLLRLHEALQDYVEKTGRRPTYEYAMIDGINDTNPEMLTLCDFCEGTLCHVNLIQLNYIPDSPFRPSPVEKVEKLQNMLASRGIEATIRNSRGSDIDAACGQLKQR
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MHKPLFQKTFITNRRFMAEPLNKPKRPPQIRTGLTDTGVKKAADKSARTRAREFALQALYQHLVGRNDADSIDAFTRDLVGFHKADSAHYDALLHGCIEGASALDAVITPLLDRPMAEISPVEHAVLWMGAYEFRQCLDVPYRVVINECIELAKAFGGTDGHKYVNGVLHKMAPSLRAAEVAADQTK

Annotated regions:
phrase: RAREFALQALYQHLVGRNDADSIDAFTRDLVGFHKADSAHYDALLHGCIEGASALDAVITPLLDRPMAEISPVEHAVLWMGAYEFRQCLDVPYRVVINECIELAKAFGGTDGHKYVNGVLHKM
type: DOMAIN
name: NusB_RsmB_TIM44
description: NusB/RsmB/TIM44
Protein sequence:
MRGRSYTPSPPRGYGRRGRSPSPRGRFGGSRDSDLPTSLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVVFAEENRKKPTEMRTRDRGGRSNRFQDRRRSPPRYSRSPPPRRGRRSRSRSRGYNSPPAKRHQSRSVSPQDRRYEKERSYSRSPPHNGSRVRSGSPGRVKSHSRSPRRSVSPRKNRSYTPEQARSQSPVPRQSRSPTPVPRGAQNGDRSPSQ

Annotated regions:
phrase: SLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: TSLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVVFAE
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: LLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRE
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain
Protein sequence:
MATKFPKFSQDLAQDPTTRRIWYGIATAHDFEMHDGMTEENLYQKIFASHFGHLAIIFLWTSGNLFHVAWQGNFAQWVADPLNTRPIAHAIWDPHFGEAAIEAFTQSDASCAVNIAYSGVYHWWYTIGMRTAADLYQGSIFLMVLAALMLFAGWLHLQPKFRPSLAWFKNAESRLNHHLAGLFGVSSLAWAGHLIHVAIPASRGETVNWGNFMSTPPHPAGLAPFFSGNWSVYAANPDTTGHVFNTSEGAGTAILTFLGGFHPQTQAMWLTDIAHHHLAIAVIFIIAGHMYKTNFGIGHSMKEILKTHRSPEGTPFGGMLGAGHDGLYDTINNSLHFQLGLALAALGVVTSLVAQHMYSMPSYAFIAQDFTTQAALYVHHQYIAIFLMCGAFAHGAIFFVRDYDHEANKNNVLGRVLEHKEAIISHLSWVSLFLGFHTLALVHNDVVVAFATPEKQILLEPVFAQFVQAASGKALYGFNVLLVNPDSAASIASDYIAGPHFWLDAINSGVNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDSFYLAVFWALNTAGWLTFYWHWKHLSIWQDNVAQFNESSTYLMGWFRDYLWLNSAQLINGYNPFGSQQLAVWAWMFLFGHLV

Annotated regions:
phrase: CDGPGRGGT
type: CONSERVED_SITE
name: PSI_PsaA/B_CS
description: Photosystem I PsaA/PsaB, conserved site
Protein sequence:
MSSLAVRDPAMDRSLRSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGPAAPIIDSPYGDPIDPEDAPESITRAVASLPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEIALKILHRKIHVTPLIPGKSQSVSVSGPGPGPGPGLCPGPNVLLNQQNPPAPQPQHLARRPVKDIPPLMQTPIQGGIPAPGPIPAAVPGAGPGSLTPGGAMQPQLGMPGVGPVPLERGQVQMSDPRAPIPRGPVTPGGLPPRGLLGDAPNDPRGGTLLSVTGEVEPRGYLGPPHQGPPMHHASGHDTRGPSSHEMRGGPLGDPRLLIGEPRGPMIDQRGLPMDGRGGRDSRAMETRAMETEVLETRVMERRGMETCAMETRGMEARGMDARGLEMRGPVPSSRGPMTGGIQGPGPINIGAGGPPQGPRQVPGISGVGNPGAGMQGTGIQGTGMQGAGIQGGGMQGAGIQGVSIQGGGIQGGGIQGASKQGGSQPSSFSPGQSQVTPQDQEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAS

Annotated regions:
phrase: VFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRAL
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: QDQEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQK
type: DOMAIN
name: CSTF_C
description: Transcription termination and cleavage factor, C-terminal domain

phrase: SVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: RSVFVGNIPYEATEEQLKDIFSEVGSVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRNLNGREFSGRALRVDNAA
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: SPYGDPIDPEDAPESITRAVASLPPEQMFELMKQMKLCVQNSHQEARNMLLQNPQLAYALLQAQVVMRIMDPEIALKI
type: DOMAIN
name: CSTF2_hinge
description: Cleavage stimulation factor subunit 2, hinge domain
Protein sequence:
MAQVQMPVLETVRDNIGIAPFPEAKEHILEVKNLNIYYGEKRAVNDISMRIDKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARTSGEIRYEGLNILDSNINVVNLRREIGMVFQKPNPFPKSIYSNITHALKYAGERRKSVLDEIVEESLTKAALWDEVKDRLHESALSLSGGQQQRLCIARTLAMKPEVLLLDEPASALDPISNAKIEELIVGLKEEYSIIIVTHNMQQASRISDQTAFFLNGDLIEYDRTEKIFMNPSEKKTEDYINGRFG

Annotated regions:
phrase: KHAVTALIGPSGCGKSTFLRSINRMNDLIPSARTSGEIRYEGLNILDSNINVVNLRREIGMVFQKPNPFPKSIYSNITHALKYAGERRKSVLDEIVEESLTKAALWDEVKDRLHESALSLSGGQQQRLCIARTLAMKPEVLLLDEPASALDPISNAKIEELIVGLKEEYSIIIVTHNMQQASRISDQTAFFLNGDLIEYDRTEKIFMNPS
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LSGGQQQRLCIART
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: VNDISMRIDKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARTSGEIRYEGLNILDSNINVVNLRREIGMVFQKPNPFPKSIYSNITHALKYAGERRKSVLDEIVEESLTKAALWDEVKDRLHESALSLSGGQQQRLCIARTLAMKPEVLLLDEP
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: LEVKNLNIYYGEKRAVNDISMRIDKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARTSGEIRYEGLNILDSNINVVNLRREIGMVFQKPNPFPKSIYSNITHALKYAGERRKSVLDEIVEESLTKAALWDEVKDRLHESALSLSGGQQQRLCIARTLAMKPEVLLLDEPASALDPISNAKIEELIVGLKEEYSIIIVTHNMQQASRISDQTAFFLNGDLIEYDRTEKIFMNPSEKKTEDY
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain
Protein sequence:
MAQEGGAVEQFGQWLWSNPIEQDPDDEMVDAREEEGQILYLDQQAGLRYSYSQLTTLKPTPPGQSNSAPVYRNAQRFQTEYSSPTIVTRSQVSELSLSHTRPPIRQALSLLSSTPRASNQPWVATLIPSPSARPPPRPSGQRQLMGRNSRNQR

Annotated regions:
Protein sequence:
MAQNSTQLEKISGSFTRLAEAFQLALTACREIEESLPSILGEKSEVSKPFKPAVTDPSNAKKEINMAIESPSKKATSPKKATPAAVAPVEATSAVDTSEAVASMTPNKRKARDPAQPKRPPSAYNLFQKNQRSEIKESLGEKSNDVKEVNKAMHEKWGSLSEDDRKTYEEEASKLREAYEEEMAAYNASKENASVADSRVTAEETSTKPSEDLSSPTKKDLIDFSETRPLAQASRATPDIKEQHAKKPKRKHTRSTVPTSNVEPVSQPQPSPDKIVSSPNPPSAKREKKKRRKSSMSSSITTPPTAKVAN

Annotated regions:
phrase: QPKRPPSAYNLFQKNQRSEIKESLGEKSNDVKEVNKAMHEKWGSLSEDDRKTYEEEASKLREAYEEEMAAYN
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain

phrase: PKRPPSAYNLFQKNQRSEIKESLGEKSNDVKEVNKAMHEKWGSLSEDDRKTYEEEASKLREAYEEEMAAY
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain

phrase: PAQPKRPPSAYNLFQKNQRSEIKESLGEKSNDVKEVNKAMHEKWGSLSEDDRKTYEEEASKLREAYEEEMAAY
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain
Protein sequence:
MRCFSCLNTQTNDMRINIDTLSDLTDYASVATKIDPRGTGSKSGILVNGKVNSPKPGGGARSFTFKELAAATKNFREGNIIGKGGFGSVYKGRLDSGQVVAIKQLNPDGHQGNQEFIVEVCMLSVFHHPNLVTLIGYCTSGAQRLLVYEYMPMGSLEDHLFDLEPDQTPLSWYTRMKIAVGAARGIEYLHCKISPSVIYRDLKSANILLDKEFSVKLSDFGLAKVGPVGNRTHVSTRVMGTYGYCAPEYAMSGRLTIKSDIYSFGVVLLELISGRKAIDLSKPNGEQYLVAWARPYLKDPKKFGLLVDPLLRGKFSKRCLNYAISITEMCLNDEANHRPKIGDVVVAFEYIASQSKSYEDRRTARKSTDSNRLRRETKQSY

Annotated regions:
phrase: FREGNIIGKGGFGSVYKGRLDSGQVVAIKQLNPDGHQGNQEFIVEVCMLSVFHHPNLVTLIGYCTSGAQRLLVYEYMPMGSLEDHLFDLEPDQTPLSWYTRMKIAVGAARGIEYLHCKISPSVIYRDLKSANILLDKEFSVKLSDFGLAKVGPVGNRTHVSTRVMGTYGYCAPEYAMSGRLTIKSDIYSFGVVLLELISGRKAIDLSKPNGEQYLVAWARPYLKDPKKFGLLVDPLLRGKFSKRCLNYAISITEMCLNDEANHRPKIGDVVVAFEY
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: VIYRDLKSANIL
type: ACTIVE_SITE
name: Ser/Thr_kinase_AS
description: Serine/threonine-protein kinase, active site

phrase: REGNIIGKGGFGSVYKGRLDSGQVVAIKQLNPDGHQGNQEFIVEVCMLSVFHHPNLVTLIGYCTSGAQRLLVYEYMPMGSLEDHLFDLEPDQTPLSWYTRMKIAVGAARGIEYLHCKISPSVIYRDLKSANILLDKEFSVKLSDFGLAKVGPVGNRTHVSTRVMGTYGYCAPEYAMSGRLTIKSDIYSFGVVLLELISGRKAIDLSKPNGEQYLVAWARPYLKDPKKFGLLVDPLLRGKFSKRCLNYAISITEMCLNDEANHRPKI
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: FREGNIIGKGGFGSVYKGRLDSGQVVAIKQLNPDGHQGNQEFIVEVCMLSVFHHPNLVTLIGYCTSGAQRLLVYEYMPMGSLEDHLFDLEPDQTPLSWYTRMKIAVGAARGIEYLHCKISPSVIYRDLKSANILLDKEFSVKLSDFGLAKVGPVGNRTHVSTRVMGTYGYCAPEYAMSGRLTIKSDIYSFGVVLLELISGRKAIDLSKPNGEQYLVAWARPYLKDPKKFGLLVDPLLRGKFSKRCLNYAISITEMCLNDEANHRPKIGDVVVAFEY
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: IGKGGFGSVYKGRLDSGQVVAI
type: BINDING_SITE
name: Protein_kinase_ATP_BS
description: Protein kinase, ATP binding site
Protein sequence:
MTTAAERKYINIRKRLDQLGYRQTLSVDSLPLVEKLFSDLVHTTESLRQCRLSSGKAEKESANLDFVLEPYKLENTRLNKENNELYLELMKLRECSDKHIKDLKTTLKKCSRETADLKFLNNQYVHKVKVLEKESKAKDEKIQQLQEKNLRAVVQTPGGRKRNIAFRRQRMQIDEPAPPSEVSAYPVPQPEDPYIADLLQVADNRIQELQEEVQQLQEKLAQMEKGVLDYSKQIELREREIQRLSLALDGGCSPDVLSLETRNKTNEKLIAHLNVQVDFLQQANKELEKHIQELMETKETVTTEVVNLSNRNEKLCQELTEIDQLAQRLERHKEQVLETADKELGEAKKEIKRNLCEMRNLEEKMSKLQWELDLSHKEKERLNSELLLKSDLETVVHQLEQEKQRLSKKLQSFAVTERELTLEVERMRLEHGIKRRDKSPSRLDTFLKGIEEERDYYKKELEKLQHLIQRRSCAINYSAREKPPVVKCSEKGDCSTDVHLITRERDELQRMLERFEKYMEDIQSNVKLLTAERDKLNVLYKEAKEELSTLRKESTNSTSPNHLVSCVEKEKERALSELRRITAEKEALREKLKNIQERNAVGKSDLEKTIEHLTYINHQLENEKYELQSKMLMMKETVESLENKSKLQAQKLSHVTGDSSHQKTEMTSLRIVSEQLQRSLDDCQHRLSIKRGELESAQEQIKMLEQKLENLSHRMTVQSEETHAMKKTIGVMDKEKDFLQETVDEKTEKIANLQESLLSKEKVIAQLK

Annotated regions:
Protein sequence:
MNKFYLKDLIKFLKTNNINFEVFDPLELLDKFIVYNIFTDTRDVLNQVEEDKPKEYCTKENRDSIFIAIKGEKFDSHLKLKEIVQNCKIIFIEKTDFLTEDEDLISFCISNKIIAIKSNNNRIIMAFLYKFKYDSIDEKLNIFAITGTDGKTSMVAVLHLIFSSLFGLSASIGTLGVNLNGVKYDFKQTTPTTPEIKDIYFIFENLYKKGVKFIFIEATSIASVQKRLEGISFDNLSFTTMTSDHLDFHKTLENYYNAKIAFIKQLANSKKDIKTIIYNLDDLNVNLIKQELKKFDNIISFNYGYHKDSDFRVIETKYFNRLLNVKIEISEKILSYYNIPANKKIIEIDTNLIGKVNSYNIVHSVAQIFNYLIVHQKKDINEFFIYIEKTKKIYKSLCIPGRMERIDYNNNDIFIDYAHTSDSLKNAILTLKDAGYKKIFTIMGCGGDRDKTKRPAMGRIATELSDFVIITSDNPRNEEPDQIIKDILDGITKENYLVEIDRYDAIKKGLDLLNKTRDHGALLIAGKGHEDYQEIKGIKHHFSDKEVVQSLIKK

Annotated regions:
phrase: ITGTDGKTSMVAVLHLIFSSLFGLSASIGTLGVNLNGVKYDFKQTTPTTPEIKDIYFIFENLYKKGVKFIFIEATSIASVQKRLEGISFDNLSFTTMTSDHLDFHKTLENYYNAKIAFIKQLANSKKDIKTIIYNLDDLNVNLIKQELKKFDNIISFNYGYHKDSDFRVIETKYFNRLLNVKIEISEKILSYYNIPANKKIIEIDTNLIGKVNSYNIVHSV
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRMERIDYNNNDIFIDYAHTSDSLKNAILTLKDAGYKKIFTIMGCGGDRDKTKRPAMGRIATELSDFVIITSDNPRNEEPDQIIKDILDGITKENYLVEIDRYDAIKKGLDLLNKTRDHGALLIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MYVNGRILRILKFKKDGFRQQNFLYPLLLQEYIYSLAHDHNFNSFFFYKPVEIFGYDNKSSLVLVKRLITRMYQQNSLISSVNYSNQKGFWGHKNFFFSNFYSQMVSEGFGVILEIPFSSQLVSSLEEKKIPKSQNLRSIHSIFPFLEDKFLHLNYVSDLLIPHPIHLEILVQILQCWIKDVPSLHLLRLLFHEYHYFNSLITSKKSIYAFSRIKKRFLWFLYNSYVYECEYLFHFLRKQSSYLRSTSSGVFLERTHFYVKIEHLIVVCCNSFHRILCFLKDPFMHYVRYQGKAILASKGTLILMKKWKFHLVNFWQSYLHFWSQPYRIHIKQLYNYSFSFLGYFSSVLENHLVVRNQMLENSFLINIMTKKLDTIAPVISLIGSLSKAQFCTVLGHPISKPIWTDLSDSDILDRFCRICRNLCRYHSGSSKKKVLYRIKYILRFSCARTLARKHKSTVRTFMRRLGSGLLEEFFMEEEVLSLIFLQKIPFPLHGSHRDRIWYLDIIHINDLVDHS

Annotated regions:
phrase: TKKLDTIAPVISLIGSLSKAQFCTVLGHPISKPIWTDLSDSDILDRFCRICRNLCRYHSGSSKKKVLYRIKYILRFSCARTLARKHKSTVRTFMRRLGSGLLEEFFMEE
type: DOMAIN
name: Domain_X
description: Domain X

phrase: FKKDGFRQQNFLYPLLLQEYIYSLAHDHNFNSFFFYKPVEIFGYDNKSSLVLVKRLITRMYQQNSLISSVNYSNQKGFWGHKNFFFSNFYSQMVSEGFGVILEIPFSSQLVSSLEEKKIPKSQNLRSIHSIFPFLEDKFLHLNYVSDLLIPHPIHLEILVQILQCWIKDVPSLHLLRLLFHEYHYFNSLITSKKSIYAFSRIKKRFLWFLYNSYVYECEYLFHFLRKQSSYLRSTSSGVFLERTHFYVKIEHLIVVCCNSFHRILCFLKDPFMHYVRYQGKAILASKGTLILMKKWKFHLVNFWQSYLHFWSQPYRIHIKQLYNYSFSFL
type: DOMAIN
name: Maturase_MatK_N
description: Maturase MatK, N-terminal domain
Protein sequence:
MALKTLRIGTRASQLALWQANWVKSELEKRYPGLEVSLLKIKTIGDKILDVPLAQVGGKGLFVKEIEEAMLRGDIDIAVHSMKDVPTEFPEGLGLHCITEREDPRDAVISRGIKFADLPKGAKIGTSALRRQAQLLKIRPDMEMVIIRGNVETRINKLEAENLDAVILAAAGLKRLGFTDKVAEYLPTDLSIPAIGQGALGIECRLDNEEVKSAIDFFNHPATAYAVRAERALLWRCEGGCQVPIAAFGEVEGDQLKLTGFIASVDGKTSVKGSVSGPAEECEKLGITLAEQLLKDGGHEILAEVYQREVSREKEIPV

Annotated regions:
phrase: LRIGTRASQLALWQANWVKSELEKRYPGLEVSLLKIKTIGDKILDVPLAQVGGKGLFVKEIEEAMLRGDIDIAVHSMKDVPTEFPEGLGLHCITEREDPRDAVISRGIKFADLPKGAKIGTSALRRQAQLLKIRPDMEMVIIRGNVETRINKLEAENLDAVILAAAGLKRLGFTDKVAEYLPTDLSIPAIGQGALGIECRLDNEEV
type: DOMAIN
name: Porphobilin_deaminase_N
description: Porphobilinogen deaminase, N-terminal

phrase: YAVRAERALLWRCEGGCQVPIAAFGEVEGDQLKLTGFIASVDGKTSVKGSVSGPAEECEKLGITLAEQLL
type: DOMAIN
name: Porphobilinogen_deaminase_C
description: Porphobilinogen deaminase, C-terminal

phrase: ERALLWRCEGGCQVPI
type: BINDING_SITE
name: Porphobilin_deaminase_cofac_BS
description: Porphobilinogen deaminase, dipyrromethane cofactor binding site
Protein sequence:
MSLDIKKPNITKTKKKKTGFVVKMQLNNNRGGNKRNIFIFFFFRNYYTWILWFCLSLYFFTSYFSVEDQSSPSSIRLLSNHKTSSSLPSRALIESSAIKTTSIGLFTGMKIYVYDLPASYNDDWVTASDRCASHLFAAEVAIHRALLSSDVRTLDPDEADYFFVPVYVSCNFSTSNGFPSLSHARSLLSSAVDFLSDHYPFWNRSQGSDHVFVASHDFGACFHAMEDMAIEEGIPKFMKRSIILQTFGVKYKHPCQEVEHVVIPPYIPPESVQKAIEKAPVNGRRDIWAFFRGKMEVNPKNISGRFYSKGVRTAILKKFGGRRRFYLNRHRFAGYRSEIVRSVFCLCPLGWAPWSPRLVESAVLGCVPVVIADGIQLPFSETVQWPEISLTVAEKDVRNLRKVLEHVAATNLSAIQRNLHEPVFKRALLYNVPMKEGDATWHILESLWRKLDDRSYRRSRVLSQREVDM

Annotated regions:
phrase: GMKIYVYDLPASYNDDWVTASDRCASHLFAAEVAIHRALLSSDVRTLDPDEADYFFVPVYVSCNFSTSNGFPSLSHARSLLSSAVDFLSDHYPFWNRSQGSDHVFVASHDFGACFHAMEDMAIEEGIPKFMKRSIILQTFGVKYKHPCQEVEHVVIPPYIPPESVQKAIEKAPVNGRRDIWAFFRGKMEVNPKNISGRFYSKGVRTAILKKFGGRRRFYLNRHRFAGYRSEIVRSVFCLCPLGWAPWSPRLVESAVLGCVPVVIADGIQLPFSETVQWPEISLTVAEKDVRNLRKVLE
type: DOMAIN
name: Exostosin_GT47
description: Exostosin, GT47 domain
Protein sequence:
MSTPHHILVGISGGVDSAVATCLLVQQGYRVTAVNLRLLDTLDAPYAEPTLQPSSLVVSDHPDYHIPLFSLNLSRTFRDEVMRYFNAEYLAGRTPNPCMVCNRQVKWAGLRHAAELIGANAIATGHYANRAFSDGRYRLYKGADSQKDQSYFLWMLSQKDLAHTLLPLGGLTKPEVRELAKNFGVRAAEKKESQEICFVPNDDYSTYLMSAMPELAERVADGDIVDAAGTVIGKHRGYPFYTIGQRRGLGVSAKEPLYVTALDAEQNRIHVGHKAALMSHRLLASRCNWIGMEPPSSSVELLGRIRYRDRQTACRVTPLENGQIEVVFQEPKSAITPGQAVVFYCGDEVLGGGFIEEGT

Annotated regions:
phrase: HRLLASRCNWIGMEPPSSSVELLGRIRYRDRQTACRVTPLENGQIEVVFQEPKSAITPGQAVVFYCGDEVLGGGF
type: DOMAIN
name: MnmA-like_C
description: tRNA-specific 2-thiouridylase MnmA-like, C-terminal domain

phrase: VADGDIVDAAGTVIGKHRGYPFYTIGQRRGLGVSAKEPLYVTALDAEQNRIHVG
type: DOMAIN
name: MnmA-like_central
description: tRNA-specific 2-thiouridylase MnmA-like, central domain
Protein sequence:
MATTSYRLVVAPAGSQRSSTGNVVVTTTSSGSHSSNGANGGTGGTSAGSSTLGSGLNVTTITATSGGQLQSAGNTSQSNGTTYKIEMLEEDIQSLGSDDDDEDLISSDGSLYEGDLGSMPVNDDVAHQLAAAGPVGVAAAAAIASSKKRKRPHCFETNPSVRKRQQNRLLRKLRAIIYEFTGRVGKQAVVLVATPGKPNTSYKVFGAKPLEDVLRNLKNIVMDELDNALAQQAPPPPQDDPSLFELPGLVIDGIPTPVEKMTQAQLRAFIPLMLKYSTGRGKPGWGRESTRPPWWPKELPWANVRMDARSEDDKQKISWTHALRKIVINCYKYHGREDLLPTFADDEDKVNALISQSGDEDEDMELSNPPTIHTVTTMTPPTGNSNQPQQVNVVKINSAGTVITTHTAQSNTPAPTIIQSTNNQHVTTTATLPASTKIEICQAPAQNQQHHQHHQTHLPNAVHIQPVAGGQPQTIQLTTASGTATATAVQTTAAAVSAAQAHAHSQSQAHSQSSANQTVTAQQIANAQVCIEPITLSDVDYTTQTVLSQNADGTVSLIQVDPNNPIITLPDGTTAQVQGVATLHQGEGGATIQTVQSLTDVNGHENMTVDLTETQDGQIYITTEDGQGYPVSVSNVISVPVSMYQSVMANVQQIQTNSDGTVCLAPMQVENGDQLETITMSPGMHQMMIQGGPGQEPQLVQVVSLKDATLLSKAMEAINSGNVKSEDTIIMEQ

Annotated regions:
phrase: GPVGVAAAAAIASSKKRKRPHCFETNPSVRKRQQNRLLRKLRAIIYEFTGRVGKQAVVLVATPGKPNTSYKVFGAKPLEDVLRNLKNIVMDELDNALAQQAPPPPQDDPSLFELPGLVIDGIPTPVEKMTQAQLRAFIPLMLKYSTGRGKPGWGRESTRPPWWPKELPWANVRMDARSEDDKQKISWTHALRKIVINCYKYHGREDLLPT
type: DOMAIN
name: Nrf1_NLS/DNA-bd_dimer
description: Nuclear respiratory factor 1, NLS/DNA-binding, dimerisation domain