nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MEEVITIAQIVHRGTDILSLNNEEIEALVDEIYSTLKGSNDIKNIRLIDFLFSLKDFVNHVRAEQSKLPDLSMPMEAYIRQLLVNPDVVPIVSEKKKELRVRPSTRKEIFLINGTHLAVPAEVPIEIYGLKLRLKTFSPQCFMRMAEIGSFSPETLGYVASGANLTNFIRVFMKCVDQETWKKNGEGVVVTTKENIIQFTHQYIELYKFLRSGGHSWLINRLAEEMVHRKLDRENQGSHISSIIETEEVEPEEENIKRVIFFLKELSTMYSVFPVFTSGYMPLLYDLYRAGYLEVLWNPVEQKFLQHAEQREKEQMILQQVDMKLTEVTTQARQYFKIMEEKIGRVQSDTIREILTMEGKVDDPSSILQEVIKACGKQEAELITTEYLNIKKQWELQEKNACAHLKLVKQLRSGLQYAESLKVLESIRVLYKEKNNTTNWNLCKACGFKLLCPHVDMLIQLQAAEASYDTMRTKLMKFSGINKEKENNQGLIYSYFCKICGEELAHFIQEDRTADVGVIGDLNSKLRIFIWQETMKACTFIHFGKLVDVKQFANIAVNVCLPLIYSIENIKKEEDYDPLTQLYAVIYIYAYILNLIYSSQKNKEFLTITIHGMKADSSLNAYVTFLLEKMTQQYSGIINQLSEITDQWIANNFREAFKKIIHQNGLQGLSVQDDTKVLLTEILLDPLYDYAATVARIDGSIPMHKPRTPKEAEYEFKTVIGRTPAELLSQKEFYDKIYTSKYRPDFTQLARLNDVYFQEESLRVWWGGRDEEKISTLIYLRAYELFLKYLQNAPNFNSELAEFKKYENAYGEQKALLAQQGFYNIFDPNTGKADQRTRLFEYKKLPISTLYDEKGLPHKWTIYVYKAIDSSQKPAEIEVSRKDVIKKIDNHYALADLRCSVCHVLQHEVGQLNIKKVQTALKASLEFNTFYAFYESRCPKGGLHDFQDKKCIKCGLFTYIIYDHLSQPELVHDYYNNYKDQYEKEKMSIHSIQIKKDIAVPPTETQPKPQQKPWTFDYGKIIKTAKILDISPAVVEAIGAMEGRSYADIKEGQGAPPPPTSMDDPRLMAVDSAVRIFLYNYNCLRHISTFNKPPMHIERLVKHLSYEEKEDLEKVLPNVVNEYHTTFKQLRVTDPASALLYSIEFLCISFLTLYEIKEPSWVVNIVREFALTELNTIIQSEKLLSKPGAFNFMIFGEDFVCSGEDSSMDDISAYSSPGLFGEDIIDRLDDPFSIEDVDISLDVLDNLAPQ

Annotated regions:
Protein sequence:
MALKTFKPVTPSLRQLVLVDRRELYKGKPVKALTEGKSSSGGRNNLGRITVRFRGGGHKRVLRNVDFKRRDQLGVAATVERIEYDPNRTAFIALINFPDGKQSYILAPQRLQPGDKVVAGESVDIKPGNAGPVGSMPVGTIVHNVELKIGKGGAIARSAGNYAQIVGRDQGYVTLRLNSGEQRLVHGQCFASVGAVSNPDHMNISLGKAGRNRWLGKRPHNRGVAMNPVDHPHGGGEGRTSGGRNPVTPWGVPTKGKKTRSNKRTDVFILSSRHNRKK

Annotated regions:
phrase: IKPGNAGPVGSMPVGTIVHNVELKIGKGGAIARSAGNYAQIVGRDQGYVTLRLNSGEQRLVHGQCFASVGAVSNPDHMNISLGKAGRNRWLGKRPHNRGVAMNPVDHPHGGGEGRTSGGRNPVTPWGV
type: DOMAIN
name: Ribosomal_uL2_C
description: Large ribosomal subunit protein uL2, C-terminal

phrase: KPGNAGPVGSMPVGTIVHNVELKIGKGGAIARSAGNYAQIVGRDQGYVTLRLNSGEQRLVHGQCFASVGAVSNPDHMNISLGKAGRNRWLGKRPHNRGVAMNPVDHPHGGGEGRTSGGRNPVTPW
type: DOMAIN
name: Ribosomal_uL2_C
description: Large ribosomal subunit protein uL2, C-terminal

phrase: PHNRGVAMNPV
type: CONSERVED_SITE
name: Ribosomal_uL2_CS
description: Large ribosomal subunit protein uL2, conserved site

phrase: GRNNLGRITVRFRGGGHKRVLRNVDFKRRDQLGVAATVERIEYDPNRTAFIALINFPDGKQSYILAPQRLQPGDKV
type: DOMAIN
name: Ribosomal_uL2_RNA-bd_dom
description: Large ribosomal subunit protein uL2, RNA-binding domain
Protein sequence:
MTKAVLTSISQLALKALLYEVSLSPKPGLVDRFDNGAHDDMSFMTFIDSMIALSPFFQAYIETGFAYAKEEPLLLFNRLRQLGQKAEETMFCATQGINTHKGLNFSMALLLGATGAYLARTPHLMTDLGCFSKEDTLAICRLVKPMTAHLIQTDLGHLNTKKEFTYGEQLFVTYGIKGPRGEASEGFTTLTDHALPYFRQMISQNDPETSQLRLLVYLMSIVEDGNLIHRGGIEAWKGVKADMRLLLQQDLSTTDLRLALSSYNQCLINQHLSPGGAADLLALTFYFAFLEKLL

Annotated regions:
Protein sequence:
MELTLTTSLGLAVFVFILFKLLTGSKSTKNSLPEAWRLPIIGHMHHLVGTLPHRGVTDMARKYGSLMHLQLGEVSTIVVSSPRWAKEVLTTYDITFANRPETLTGEIVAYHNTDIVLSPYGEYWRQLRKLCTLELLSAKKVKSFQSLREEECWNLVKEVRSSGSGSPVDLSESIFKLIATILSRAAFGKGIKDQREFTEIVKEILRLTGGFDVADIFPSKKILHHLSGKRAKLTNIHNKLDSLINNIVSEHPGSRTSSSQESLLDVLLRLKDSAELPLTSDNVKAVILDMFGAGTDTSSATIEWAISELIRCPRAMEKVQTELRQALNGKERIQEEDIQELSYLKLVIKETLRLHPPLPLVMPRECREPCVLAGYEIPTKTKLIVNVFAINRDPEYWKDAETFMPERFENSPINIMGSEYEYLPFGAGRRMCPGAALGLANVELPLAHILYYFNWKLPNGARLDELDMSECFGATVQRKSELLLVPTAYKTANNSA

Annotated regions:
phrase: FGAGRRMCP
type: CONSERVED_SITE
name: Cyt_P450_CS
description: Cytochrome P450, conserved site
Protein sequence:
MKIHEYQGKQLFRTAGVPVLDGHMVTTPDEAAAAYDKLGGKIAVVKAQIHAGGRGKGNVIDNPDQKGVVLVKSAEEAKAAAEGLLGKKLVTIQTGPEGQTVSKVFVEAGCDIARELYLGIVVDRAGSKPVLMVSTEGGVEIETVAEETPELIFKEHFDPAVGLDGFQVRKLCKKLGIEGAAAKSAYKFMTAMCRFFVDFDCEMAEINPLVITGDGEMVALDAKIIFDENAMFRHKDLEELRDLSEEEESELRAKKAGLSYVKLDGNIACLVNGAGLAMSTMDIIKYHGGEPANFLDVGGGANAAQVTEAFRILLSDPNCKGVLVNIFGGIARCTTIAGALITASKEVGFNVPLVVRLEGTEVEEGRKMLAESDVDIINAMDLTDAAKKIVAATA

Annotated regions:
phrase: LVNGAGLAMSTMDIIKYHGGEPANFLDVGGGANAAQVTEAFRILLSDPNCKGVLVNIFGGIARCTTIAGALITASKEVGFNVPLVVRLEGTEVEEGRKMLAESDVDIINAMDLTDAAKKI
type: DOMAIN
name: SUCC_ACL_C
description: ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain

phrase: KQLFRTAGVPVLDGHMVTTPDEAAAAYDKLGGKIAVVKAQIHAGGR
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold

phrase: KIHEYQGKQLFRTAGVPVLDGHMVTTPDEAAAAYDKLGGKIAVVKAQIHAGGRGKGNVIDNPDQKGVVLVKSAEEAKAAAEGLLGKKLVTIQTGPEGQTVSKVFVEAGCDIARELYLGIVVDRAGSKPVLMVSTEGGVEIETVAEETPELIFKEHFDPAVGLDGFQVRKLCKKLGIEGAAAKSAYKFMTAMCRFFVDFDCEMAEINPLV
type: DOMAIN
name: ATP-grasp_succ-CoA_synth-type
description: ATP-grasp fold, succinyl-CoA synthetase-type

phrase: GNIACLVNGAGLAMSTMDIIKYHGG
type: CONSERVED_SITE
name: Succ-CoA_synthase_bsu_CS
description: Succinyl-CoA synthetase, beta subunit, conserved site
Protein sequence:
MTKRYAIVLAAGQGTRMRSKLYKVLHKVCGKAMVEHVIDQVEVAGVDKVVTIVGHGAETVKETVGNRSEFVLQEEQLGTGHAVLQAESVIGKEKGTTLVICGDTPLLTGETLNKLVKHHEEQQAKATVLSAHAEDPFGYGRIIRNNDQLVEKIVEQKDSTEEEAKVNEINTGTYVFDNEALFEALSQVKNDNSQGEYYLPDVIEIIKAQGEIVSAYQMADMEEALGVNDRVALAEAAKTMKKRINEKHMRNGVTIIDPDHTYIDSEVVIGSDSIIEPGVVLRGKTIIGEECFIGSQSEICDSTIGDYVKVTSSMIEHSEMASNSNVGPYSHIRPNSKIGEAVHIGNFVEIKNATVGKDTKVGHLTYVGDADLGENINVGCGTVFVNYDGKKKHRSTIGDNTFIGCNVNVVAPVTIDKNTFLAAGSTITKDVPEGAMGIARARQENKEGYWDKLPPSNNQKG

Annotated regions:
phrase: IGCNVNVVAPVTIDKNTFLAAGSTITKD
type: CONSERVED_SITE
name: Hexapep_transf_CS
description: Hexapeptide transferase, conserved site

phrase: MASNSNVGPYSHIRPNSKIGEAVHIGNFVEIK
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: STIGDNTFIGCNVNVVAPVTIDKNTFLAAGSTIT
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: VVIGSDSIIEPGVVLRGKTIIGEECFIGSQSE
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: GVTIIDPDHTYIDSEVVIGSDSIIEPGVVLRGKTIIGEECFIGSQSEICDSTIGDYVKVTSSMIEHSEMASNSNVGPYSHIRPNSKIGEAVHIGNFVEIKNATVGKDTKVGHLTYVGDADLGENINVGCGTVFVNYDGKKKHRSTIGDNTFIGCNVNVVAPVTIDKNTFLAAGSTITKDVPEGAMGIARAR
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain

phrase: AIVLAAGQGTRMRSKLYKVLHKVCGKAMVEHVIDQVEVAGVDKVVTIVGHGAETVKETVGNRSEFVLQEEQLGTGHAVLQAESVIGKEKGTTLVICGDTPLLTGETLNKLVKHHEEQQAKATVLSAHAEDPFGYGRIIRNNDQLVEKIVEQKDSTEEEAKVNEINTGTYVFDNEALFEALSQVKNDNSQGEYYLPDVIEIIKAQGEIV
type: DOMAIN
name: NTP_transferase_dom
description: Nucleotidyl transferase domain
Protein sequence:
MDAMKYHDLRDFLTLLEQQGELKRITLPVDPHLEITEIADRTLRAGGPALLFENPKGYAMPVLCNLFGTPKRVAMGMGQDDVSALREVGKLLAFLKEPEPPKGFRDLFDKLPQFKQVLNMPTKRLRGAPCQQKIASGDDVDLTRLPVMTCWPDDAAPLITWGLTVTRGPHKERQNLGIYRQQLIGKNKLIMRWLSHRGGALDFQEWLAARPGERFPVSVALGADPATILGAVTPVPDTLSEYAFAGLLRGTKTEVVKCLSNDLEVPASAEIILEGYIEPGEMAPEGPYGDHTGYYNEVDNFPVFTVTHITQREDAIYHSTYTGRPPDEPAVLGVALNEVFVPILQKQFPEIVDFYLPPEGCSYRLAVVTMKKQYAGHAKRVMMGVWSFLRQFMYTKFVIVCDDDVNARDWNDVIWAITTRMDPARDTVLVENTPIDYLDFASPVSGLGSKMGLDATNKWPGETQREWGRPIVKDPEVTARIDAIWDELAIFK

Annotated regions:
phrase: GAPCQQKIASGDDVDLTRLPVMTCWPDDAAPLITWGLTVTRGPHKERQNLGIYRQQLIGKNKLIMRWLSHRGGALDFQEWLAARPGERFPVSVALGADPATILGAVTPVPDTLSEYAFAGLLRGTKTEVVKCLSNDLEVPASAEIILEGYIEPGEMAPEGPYGDHTGYYNEVDNFPVFTVTHITQREDAIYHSTYTGR
type: DOMAIN
name: UbiD_Rift_dom
description: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase-like, Rift-related domain

phrase: LTLLEQQGELKRITLPVDPHLEITEIADRTLRAGGPALLFENPKGYAMPVLCNLFGTPKRVAMGMGQDDVSALREVGKL
type: DOMAIN
name: UbiD-like_N
description: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase-like, N-terminal domain

phrase: VLGVALNEVFVPILQKQFPEIVDFYLPPEGCSYRLAVVTMKKQYAGHAKRVMMGVWSFLRQFMYTKFVIVCDDDVNARDWNDVIWAITTRMDPARDTVLVENTPIDYLDFASPVSGLGSKMGLD
type: DOMAIN
name: UbiD-like_C
description: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase-like, C-terminal domain
Protein sequence:
MDMQTGSRFFTDRLADSDPDLFQAIRSELTRQQDQIELIASENIVSQAVLEAQGSVLTNKYAEGYAGRRYYGGCEYVDIAETLAIERAKALFGCAYANVQPHSGAQANQAVFMALLQPGDTFMGMDLAAGGHLTHGAPANQSGKWFKVVSYGVRRDDHLIDYEEVEAKAREHRPKLIIAGGSAYPRQIDFARFRRIADEIGAYLMVDMAHYAGLVAAGVYPSPLPHAHVVTTTTHKTLRGPRGGMILSNDPELGKKFNSAVFPGLQGGPLMHVIAAKAVAFGEALRPEFKAYAQAVVDNARVLADRLVAGGLDIVSGGTDSHIVLVDLRPKRLTGKAAEATLEHAGMTCNKNGVPFDPEKPLVTSGVRLGSPAATTRGFGTAEFAQVGDLIVEVLDGLARSNGDNTATETRVREQVRALCHRFPIYPAL

Annotated regions:
phrase: HVVTTTTHKTLRGPRG
type: BINDING_SITE
name: Ser_HO-MeTrfase_PLP_BS
description: Serine hydroxymethyltransferase, pyridoxal phosphate binding site

phrase: LADSDPDLFQAIRSELTRQQDQIELIASENIVSQAVLEAQGSVLTNKYAEGYAGRRYYGGCEYVDIAETLAIERAKALFGCAYANVQPHSGAQANQAVFMALLQPGDTFMGMDLAAGGHLTHGAPANQSGKWFKVVSYGVRRDDHLIDYEEVEAKAREHRPKLIIAGGSAYPRQIDFARFRRIADEIGAYLMVDMAHYAGLVAAGVYPSPLPHAHVVTTTTHKTLRGPRGGMILSNDPELGKKFNSAVFPGLQGGPLMHVIAAKAVAFGEALRPEFKAYAQAVVDNARVLADRLVAGGLDIVSGGTDSHIVLVDLRPKRLTGKAAEATLEHAGMTCNKNGVPFDPEKPLVTSGVRLGSPAATTRGFGTAEFAQVGDL
type: DOMAIN
name: SHMT-like_dom
description: Serine hydroxymethyltransferase-like domain
Protein sequence:
MNSIEFPLLDRTTQISVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIRSQPGKRCFTTNHKFNIERTTHTGNYDQELLYQSPSTSKIPPETFFKYKRSVSSNELVN

Annotated regions:
phrase: CCFIEFASLIGSRFDFDRYGLVPRSSPRQADLILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITK
type: DOMAIN
name: NADH_UbQ_OxRdtase-like_20kDa
description: NADH:ubiquinone oxidoreductase-like, 20kDa subunit
Protein sequence:
MKCLKTLLVSTTLLGAFSLNAEVTLEQQIKITDEGLHFDGRNLDFSNVGSPDTGEKYDYFFGPNISAHGDAVKTYKHYVFMTWYKGGKNERNVMLSRYNTLSGELSTIEFPHRHTGFRGDPLVGESHNTIGLAVSPINGTIHMVFDMHAYDDNNHGGKFKDDFFRYSYSVPGAAELPHSEFTLDKFVKDTSEVSQGDDDYKHLTMTGDLGDKGNFARLTYPKFFTTVDGTLLLYMRLGGNNNGAYVFNRYDAEAEKWSTFTPFNENNQKSKGNPYNWGLYGNMKYINGKLRVGFQQRSSDNTDKYKYQNGVFYAYSDHPDGFGDWKNHKGEPMTWPLINSDEIKVFEPGDYISHTEANSVYIVGSFDWTVTEKGDIHIISKVRSTDRNRPDYEEVYIHSYKPAGADEFIISTDFTGASEIYTSGDNVYIVGLEGGRPYVEKAQGGTNNFVRVYKATDGPVFDHGTLYIKDGKVYYYLMERTSGNAMPLYLQIIDLDLESDANAPLVSFPSPSLTVEQGFEKLSLNISAESPVEGRFIQSVSLYINDELVRTDDSMPYLFGHGSKPHETGAMGWLDTHEPNPSPLPAGTHIFKAVAVDSEGDSAIATMVLNVNSNAPIVSFPQESLEVDEGFEKLSLNISAESAVEGRSIESVSLYINGELVRTDTSLPYLFGHASKPHETGAMGWLDTHSTNPSPLTAGTYEFTAVAIDSEGEESTASMQLVVKGEPQPPAVTWPNSTVTVYEGYEKLAITIDAESPVEGRDIQSVTLYRNGELVRVDTRPVWNFGHSFAPYEFGAMGWLDRHEPNPSPLGVGTHTFTAVAKDSTGLEGESDMTLIVLSLPGPSITINESDVSLLTEYQNLAITADASTANDDITIVSLALYLNEQLVREIYEPPFEWGGENYSDELLDLPVGTHLAKVVATDSNNNQTEASMFVTIELLGDLNKDSVVDNKDIRLFTAALRNGEEMNIRYDFNDDGVVNNRDTRGLVHRCTYSRCGSN

Annotated regions:
Protein sequence:
MVKIVGDLTEFRAELSNAGSKLIVVDFSATWCGPCKMIKPFFHSMVEKYPDVVFIEIDVDDAQDVASHCDVKCMPTFQFYKNNEKVHEFSGANKEKLEEAIKKYM

Annotated regions:
phrase: TEFRAELSNAGSKLIVVDFSATWCGPCKMIKPFFHSMVEKYPDVVFIEIDVDDAQDVASHCDVKCMPTFQFYKNNEKVHEFSGANKEKLEEAIK
type: DOMAIN
name: Thioredoxin_domain
description: Thioredoxin domain

phrase: MVKIVGDLTEFRAELSNAGSKLIVVDFSATWCGPCKMIKPFFHSMVEKYPDVVFIEIDVDDAQDVASHCDVKCMPTFQFYKNNEKVHEFSGANKEKLEEAIKKY
type: DOMAIN
name: Thioredoxin_domain
description: Thioredoxin domain

phrase: VVDFSATWCGPCKMIKPF
type: CONSERVED_SITE
name: Thioredoxin_CS
description: Thioredoxin, conserved site
Protein sequence:
MLGDGNEGMATIPGFNQIQFEGFCRFIDQGLAEELYKFPKIEDTDQEIEFQLFVETYQLVEPLIKERDAVYELLTYSSELYVSAGLIWKTGRDMQEQTIFIGNIPLMNSLGTFIVNGVYRILINQILQSPGIYYRSELDHNGISVYTGTIISDWGGRSELEIDRKARIWARVSRKQKISILVLSSAMGSNLREILENVCYPEIFLSFLNDKERKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNMNRRLNLDIPQNNPFLLPRDILAAADHLIGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAVRGTICGAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDGTNPLTQIVHGRKLSYLGPGGLTGRTANFRIRDIHPSHYGRICPIDTSEGINVGLIGSLSIHARIGHWGFLESPFYEISERRVLFLLPGRDEYYKVAAGNSLALNQDIQEKQVVPARYRQEFLTIAWEQVHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLEQQAALDSGALSIAEREGKVLYTDTDKILLSGNGGTLSIPLVMYQRSNKNTCMHQKPRVQRGKCIKKGQILADAAATVGGELSLGKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQGPERVTNEIPHLEAHLLRNLDKSGIVMLGSWVETGDILVGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIISKILTRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIAPFDERYEQEASRKLVFSELYQASKQTANPWVFEAEYPGKSRIFDGRTGNPFEQPVLIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIVGGTIPNPEDAPESFRLLVRELRSLALELKHFLISEKNFRIHRKEA

Annotated regions:
phrase: GGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGTTIVGGTIPNPEDAPESFRLLVRELRSLALELKH
type: DOMAIN
name: RNA_pol_Rpb2_7
description: RNA polymerase Rpb2, domain 7

phrase: QSPGIYYRSELDHNGISVYTGTIISDWGGRSELEIDRKARIWARVSRKQKISILVLSSAMGSNLREILENVCYPEIFLSFLNDKERKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNMNRRLNLDIPQNNPFLLPRDILAAADHLIGLKFGMGTLDDMNHLKNKRI
type: DOMAIN
name: RNA_pol_Rpb2_2
description: RNA polymerase Rpb2, domain 2

phrase: QVLDGTNPLTQIVHGRKLSYLGPGGLTGRTANFRIRDIHPSHYGRICPIDTSEGINVGLIGSLSIHAR
type: DOMAIN
name: RNA_pol_Rpb2_3
description: RNA polymerase Rpb2, domain 3

phrase: GDKVAGRHGNKG
type: CONSERVED_SITE
name: RNA_pol_bsu_CS
description: RNA polymerase, beta subunit, conserved site

phrase: QIQFEGFCRFIDQGLAEELYKFPKIEDTDQEIEFQLFVETYQLVEPLIKERDAVYELLTYSSELYVSAGLIWKTGRDMQEQTIFIGNIPLMNSLGTFIVNGVYRILINQILQSPGIYYRSELDHNGISVYTGTIISDWGGRSELEIDRKARIWARVSRKQKISILVLSSAMGSNLREILENVCYPEIFLSFLNDKERKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNMNRRLNLDIPQNNPFLLPRDILAAADHLIGLKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAVRGTICGAIRHKLIPTPQNLVTST
type: DOMAIN
name: RNA_pol_bsu_protrusion
description: RNA polymerase, beta subunit, protrusion

phrase: AEREGKVLYTDTDKILLSGNGGTLSIPLVMYQRSNKNTCMHQKPRVQRGKCIKKGQILADAAATVGGELSLGKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQGPERVTNEIPHLEAHLLRNLDKSGIVMLGSWVETGDILVGKLTPQMVKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPEMIRVYISQKREIKVGDKVAGRHGNKGIISKILTRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIAPFDERYEQEASRKLVFSELYQASKQTANPWVFEAEYPGKSRIFDGRTGNPFEQPVLIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRA
type: DOMAIN
name: DNA-dir_RNAP_su2_dom
description: DNA-directed RNA polymerase, subunit 2, hybrid-binding domain
Protein sequence:
MAQRPNLLSHLQDLVTKFKNMTMAQDRFKFVFTANEAALEGVTDPIRLPNLIRKAMCLARAPISKYKVGAVGRASSGRVYLGVNVDFPGLPLHHSIHAEQFLVTNLALNYEKDLCKLAVAISTDGLEFGTPCGNCLQFLMEMSNALDMKILSKPKHEAGSFSSLRLLLPNVLPKGSPFLLEKRYNCLTLSGSAGEICSLDCSHLKRRALAAANNSFSPYTESPSGVALLDNDGNWYRGWYIESVASNPSLGPVQAALVDFVARSRGKMFNKIVQAVLVEKNNASVSQERTAKIILDTIAPNCDFKVFHCSVDCAKRLKYLRETLVIDTLGDYTGLHY

Annotated regions:
phrase: HAEQFLVTNLALNYEKDLCKLAVAISTDGLEFGTPCGNCLQF
type: BINDING_SITE
name: APOBEC/CMP_deaminase_Zn-bd
description: APOBEC/CMP deaminase, zinc-binding

phrase: LDCSHLKRRALAAANNSFSPYTESPSGVALLDNDGNWYRGWYIESVASNPSLGPVQAALVDFVARSRGKMFNKIVQAVLVEKNNASVSQERTAKIILDTIAPNCDFKVFHCSVDCAKRLKY
type: DOMAIN
name: CMP_dCMP_dom
description: Cytidine and deoxycytidylate deaminase domain

phrase: SPFLLEKRYNCLTLSGSAGEICSLDCSHLKRRALAAANNSFSPYTESPSGVALLDNDGNWYRGWYIESVASNPSLGPVQAALVDFVARSRGKMFNKIVQAVLVEKNNASVSQERTA
type: DOMAIN
name: Cyd/dCyd_deaminase_Zn-bd
description: Cytidine/deoxycytidylate deaminase, zinc-binding domain

phrase: RKAMCLARAPISKYKVGAVGRASSGRVYLGVNVDFPGLPLHHSIHAEQFLVTNLALNYEKDLCKLAVAISTDGLEFGTPCGNCLQFLME
type: DOMAIN
name: CMP_dCMP_dom
description: Cytidine and deoxycytidylate deaminase domain

phrase: TDPIRLPNLIRKAMCLARAPISKYKVGAVGRASSGRVYLGVNVDFPGLPLHHSIHAEQFLVTNLALNYEKDLCKLAVAISTDGLEFGTPCGNCLQFLMEMSNALDMKILSKPKHEAGSFSS
type: DOMAIN
name: CMP_dCMP_dom
description: Cytidine and deoxycytidylate deaminase domain
Protein sequence:
MAQGSRAPSGPPLPVLPVDDWLNFRVDLFGDEHRRLLLEMLTQGCSNFVGLLNFGVPSPVYALEALVDFQVRNAFMKVKPVAQEIIRICILANHYRNSRDVLRDLRTQLDVLYSDPLKTRLLRGLIRLCRAAQTGVKPEDISVHLGADDVTFGVLKRALVRLHRVRDALGLRASPEAEARYPRLTTYNLLFHPPPFTTVEAVDLCAENLSDVTQRRNRPLRCLTSIKRPGSRTLEDALNDMYLLLTLRHLQLRHALELQMMQDWVVERCNRLCDALYFCYTQAPETRQTFVTLVRGLELARQHSSPAFQPMLYNLLQLLTQLHEANVYLCPGYLHFSAYKLLKKIQSVSDARERGEFGDEDEEQENDGEPREAQLDLEADPTAREGELFFFSKNLYGNGEVFRVPEQPSRYLRRRMFVERPETLQIFYNFHEGKITTETYHLQRIYSMMIEGASRQTGLTPKRFMELLDRAPLGQESEPEITEHRDLFADVFRRPVTDAASSSSASSSSSSASPNSVSLPSARSSSTRTTTPASTYTSAGTSSTTGLLLSSSLSGSHGISSADLEQPPRQRRRMVSVTLFSPYSVAYSHHRRHRRRRSPPPAPRGPAHTRFQGPDSMPSTSYGSDVEDPRDDLAENLRHL

Annotated regions:
Protein sequence:
MINTSPLLNYVSSHHDIKAINQWRTDVEKQLQDSYENGQSIREIIKARSDLVDEALVFLWKHAELDQSKLGLFAVGGYGRREMLPYSDVDIMILSEDEISEENEKRISTFISSLWDVGNFKPGISVRTIQSCVEQAATDLTVATTLIEARLITGNTQLAKWPRRIVSQTWTDKTFYDAKMAEQAKRYHQHNNTESNLEPDIKNAPGGIRDINQIGWIAKRHFRVNRIYDLVHLGFISEFELAVLEEAESFLWEIRHHLHRLAKRDENRLLFDHQREIAAKFGYVRQEGQPVNYGVEQFMKRYYRTAQQVSTLNEMLLAYFSESVITPRLPNYERKIEVVNDHFKIVDNKIAVQHHKIFAEHPSAILELFYILANRPDIEGIRARTLRLLILAAKRINQSYRDNPEHQALFMSIIRSPYRLYDTLVAMKRYGVLGNYIPAFGQIMGLMQYDLFHIYTVDAHTLLLLRNLNRFREPEFAKEFPVVSSVFQRLARQDIVFIAALFHDIAKGRGGDHSELGAEDAIEFGRAHGFTERECKLIAWLIQNHLLMSLTAQKKDISDPDVVKDFAEKLGDMEHLDYLYTLTVADINATNPKLWNTWRASLMRQLYTHARDVIRTGLGRPVDYQMLIEDTKFAASELLVNNFALADVEKVWQELGDEYFIKESADEIAWHTQAILKHGDNPEPLVLLRAHRKAAQDAVQIFIYTRDQPNLFATTVAVLDRMNLDVQDAKIITASTAFSLDTYVVLDRFGTLLTDPEREETVKNALVKALSQPDQYPGLMQRRIPRQLRHFDIENTVDVTLNEALQQNMVEISTLDHPGLLARVGGLFMMQGLDIHSARIATLGERAEDIFFVTKKDGKPLNNEEVKLFSEKLKAALDEASNQICQH

Annotated regions:
phrase: DIVFIAALFHDIAKGRGGDHSELGAEDAIEFGRAHGFTERECKLIAWLIQNHLLMSLTAQKKDISDPDVVKDFAEKLGDMEHLDYLYTLTVADINATNPKLWNTWRASLMRQL
type: DOMAIN
name: HD/PDEase_dom
description: HD/PDEase domain

phrase: MVEISTLDHPGLLARVGGLFMMQGLDIHSARIATLGERAEDIFFVTKKDGKPLNNEEVKLFSEKLKAALDEASNQICQ
type: DOMAIN
name: ACT_dom
description: ACT domain

phrase: MVEISTLDHPGLLARVGGLFMMQGLDIHSARIATLGERAEDIFFVTKKDG
type: DOMAIN
name: ACT_dom
description: ACT domain

phrase: QIFIYTRDQPNLFATTVAVLDRMNLDVQDAKIITASTAFSLDTYVVLDRFGTLLTDPEREETVKNALVKALSQPDQYPGLMQ
type: DOMAIN
name: ACT_dom
description: ACT domain

phrase: RQDIVFIAALFHDIAKGRGGDHSELGAEDAIEFGRAHGFTERECKLIAWLIQNHLLMSLTAQKKDISDPDVVKDF
type: DOMAIN
name: HD_domain
description: HD domain

phrase: HIYTVDAHTLLLLRNLNRFREPEFAKEFPVVSSVFQRLARQDIVFIAALFHDIAKGRGGDHSELGAEDAIEFGRAHGFTERECKLIAWLIQNHLLMSLTAQKKDISDPDVVKDFAEKLGDMEHLDYLYTLTVADINATNPKLWNTWR
type: DOMAIN
name: HD/PDEase_dom
description: HD/PDEase domain

phrase: VDAHTLLLLRNLNRFREPEFAKEFPVVSSVFQRLARQDIVFIAALFHDIAKGRGGDHSELGAEDAIEFGRAHGFTERECKLIAWLIQNHLLMSLTAQKKDISDPDVVKDFAEKLGDMEHLDY
type: DOMAIN
name: HD_domain
description: HD domain

phrase: DQSKLGLFAVGGYGRREMLPYSDVDIMILSEDEISEENEKRISTFISS
type: DOMAIN
name: Polymerase_NTP_transf_dom
description: Polymerase, nucleotidyl transferase domain

phrase: FYDAKMAEQAKRYHQHNNTESNLEPDIKNAPGGIRDINQIGWIAKRHFRVNRIYDLVHLGFISEFELAVLEEAESFLWEIRHHLHRLAKRDENRLLFDHQREIAAKFGYVRQEGQPVNYGVEQFMKRYYRTAQQVSTLNEML
type: DOMAIN
name: PII_UdlTrfase/GS_AdlTrfase
description: PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase
Protein sequence:
MNPQFRNMVDGMDPHKFSYNFKNRPILSRRNTVWLCYEVKTKGPSRPPLDAKIFRGQVYFELKNHPEMRFFHWFSKWRKLHRDQECEVTWYMSWSPCTKCTRNVATFLAEDPKVTLTIFVARLYYFWDPDYQEALRSLCQERDGPRANMKIMNYDEFQHCWNKFVYSQRELFEPWNNLPKYYIVLHIILGEILRHSMDPLTFTSNFNNEPCVEGRHETYLCYKVERLHNDTWVLLNQRRGFLCNQAPAIHGFPEGRHAELCFLDVIPFWKLDGKQRYRVTCFTSWSPCFRCAQEMAKFISNNQHVSLCIFAARIYDDQGRCKEGLRTLDEAEAKISIMTYDEFQHCWDTFVDHQGRPFLPWIRLHEHSEALSGRLRAILLNQGN

Annotated regions:
phrase: GRHETYLCYKVERLHNDTWVLLNQRRGFLCNQAPAIHGFPEGRHAELCFLDVIPFWKLDGKQRYRVTCFTSWSPCFRCAQEMAKFISNNQHVSLCIFAARIYDDQGRCKEGLRT
type: DOMAIN
name: CMP_dCMP_dom
description: Cytidine and deoxycytidylate deaminase domain

phrase: RRNTVWLCYEVKTKGPSRPPLDAKIFRGQVYFELKNHPEMRFFHWFSKWRKLHRDQECEVTWYMSWSPCTKCTRNVATFLAEDPKVTLTIFVARLYYFWDPDYQEALRS
type: DOMAIN
name: CMP_dCMP_dom
description: Cytidine and deoxycytidylate deaminase domain

phrase: HAELCFLDVIPFWKLDGKQRYRVTCFTSWSPCFRCAQE
type: BINDING_SITE
name: APOBEC/CMP_deaminase_Zn-bd
description: APOBEC/CMP deaminase, zinc-binding
Protein sequence:
MSMSDDTHNSLSTGKCPFHQGSHDRSAGAGTSSHDWWPNQLRVDLLNQHSNRSNPLGEDFDYRKEFSKLDYSALKGDLKALLSDSQPWWPADWGSYAGLFIRMAWHGAGTYRSVDGRGGAGRGQQRFAPLNSWPDNVSLDKARRLLWPIKQKYGQKISWADLFILAGNVALENSGFRTFGFGAGREDVWEPDLDVNWGDEKAWLTHRHPEALAKAPLGATEMGLIYVNPEGPDHSGEPLSAAAAIRATFGNMGMNDEETVALIGGGHTLGKTHGAAAASHVGVDPEAAPIELQGLGWSSDYGSGAGGDAITSGLEVVWSQTPTQWSNYFFENLFKYEWVQTRSPAGAIQFEAVDAPEIIPDPFDPSKKRKPTMLVTDLTLRFDPEFEKISRRFLNDPQAFNEAFARAWFKLTHRDMGPKARYIGPEVPKEDLIWQDPLPQPVFNPSQEDIVNLKAAIAASGLSVSELVSVAWASASTFRGGDKRGGANGARLALAPQRDWDVNAAAARVLPVLEEIQKSSGKASLADIIVLAGVVGVEQAASAAGVSISVPFAPGRVDARQDQTDIEMFELLEPIADGFRNYRARLDVSTTESLLIDKAQQLTLTAPEMTALVGGMRVLGANFDGSQNGVFTDRPGVLSNDFFVNLLDMRNEWKAADESKELFEGRDRLSGEVKFTATRADLVFGSNSVLRALAEVYASSDAREKFVKDFVAAWVKVMNLDRFDLL

Annotated regions:
phrase: LDKARRLLWPIKQKYGQKISWADLFILAGNVALENSGFRTFGFGAGREDVWEPDLDVNWGDEKAWLTHRHPEALAKAPLGATEMGLIYVNPEGPDHSGEPLSAAAAIRATFGNMGMNDEETVALIGGGHTLGKTHGAAAASHVGVDPEAAPIELQGLGWSSDYGSGAGGDAITSGLEVVWSQTPTQWSNYFFENLFKYEWVQTRSPAGAIQFEAVDAPEIIPDPFDPSKKRKPTMLVTDLTLRFDPEFEKISRRFLNDPQAFNEAFARAWFKLTHRDMGPKARYI
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: DWGSYAGLFIRMAWHGAGTYRSVDGRGGAGRGQQRFAPLNSWPDNVSLDKARRLLWPIKQKYGQKISWADLFILAGNVALENSGFRTFGFGAGREDVWEPDLDVNWGDEKAWLTHRHPEALAKAPLGATEMGLIYVNPEGPDHSGEPLSAAAAIRATFGNMGMNDEETVALIGGGHTLGKTHGAAAASHVGVDPEAAPIELQGLGWSSDYGSGAGGDAITSGLEVVWSQTPTQWSNYFFENLFKYEWVQTRSPAGAIQFEAVDAPEIIPDPFDPSKKRKPTMLVTDLTLRFDPEFEKISRRFLN
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: AFARAWFKLTHRDMGPKARYIGPEVPKEDLIWQDPLPQPVFNPSQEDIVNLKAAIAASGLSVSELVSVAWASASTFRGGDKRGGANGARLALAPQRDWDVNAAAARVLPVLEEIQKSSGKASLADIIVLAGVVGVEQAASAAGVSISVPFAPGRVDARQDQTDIEMFELLEPIADGFRNYRARLDVSTTESLLIDKAQQLTLTAPEMTALVGGMRVLGANFDGSQNGVFTDRPGVLSNDFFVNLLDMRNEWKAADESKELFEGRDRLSGEVKFTATRADLVFGSNSVLRALAEVYA
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: AGLFIRMAWHGAGT
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: ISWADLFILAGNVALEN
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: GFRTFGFGAGRE
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: TVALIGGGHTLGKTH
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: WSQTPTQWSNYFFEN
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: TVALIGGGHT
type: BINDING_SITE
name: Peroxidases_heam-ligand_BS
description: Peroxidases heam-ligand binding site

phrase: AGLFIRMAWHG
type: ACTIVE_SITE
name: Peroxidases_AS
description: Peroxidase, active site
Protein sequence:
MHHTNKKKYGQNFLTDVNLLNKIVTKASITDKNVLEIGPGKGALTKIIVPQAKNVLAYEIDATLKPFLNFENHNNVNIIYDDFLKRDLLKDFDHYFSPNSQLSLIGNLPYYITSPILFKIIDTPQINDATIMIQKEVGMRLLAQPNNKNYNALSVIIQFLFSIEKIQEVKRHMFFPTPKVDSIVIKLTKNNNILPTFLKQFIKFVKNSFKQKRKTLLNNLSCQFLLSKETIIPFFLQHHIPLQIRAEQVTLETFQKLTVKWFIFLNMS

Annotated regions:
phrase: VLEIGPGKGALTKIIVPQAKNVLAYEI
type: CONSERVED_SITE
name: rRNA_Ade_Mease_Trfase_CS
description: Ribosomal RNA adenine methylase transferase, conserved site

phrase: LLNKIVTKASITDKNVLEIGPGKGALTKIIVPQAKNVLAYEIDATLKPFLNFENHNNVNIIYDDFLKRDLLKDFDHYFSPNSQLSLIGNLPYYITSPILFKIIDTPQINDATIMIQKEVGMRLLAQPNNKNYNALSVIIQFLFSIEKIQEVKRHMFFPTPKVDSIVIKLTKN
type: DOMAIN
name: rRNA_Ade_methylase_Trfase_N
description: Ribosomal RNA adenine methylase transferase, N-terminal