nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MNLQPIFWIGLISSICCVFAQTDENRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDLEALKKKGCPPDDIENPRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGEPQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPVKLRNPCTSEQNCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDSPEGGFDAIMQVAVCGSLIGRRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNSLSSEVILENSKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQFEISITSNKCPKKDSDSFKIRPLGFTEEVEVILQYICECECQSEGIPESPKCHEGNGTFECGACRCNEGRVGRHCECSTDEVNSEDMDAYCRKENSSEICSNNGECVCGQCVCRKRDNTNEIYSGKFCECDNFNCDRSNGLICGGNGVCKCRVCECNPNYTGSACDCSLDTSTCEASNGQICNGRGICECGVCKCTDPKFQGQTCEMCQTCLGVCAGHKECVQCRAFNKGEKKDTCTQECSYFNITKVESRDKLPQPVQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVENPECPTGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGENPIYKSAVTTVVNPKYEGK

Annotated regions:
phrase: SCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDLEALKKKGCPPDDIENPRGSKDIKKNKNVTNRSKGTAEKLKPEDITQIQPQQLVLRLRSGEPQTFTLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPVKLRNPCTSEQNCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDSPEGGFDAIMQVAVCGSLIGRRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNSLSSEVILENSKLSEGVTISYKSYCKNGVNGTGENGRKCSNISIGDEVQFEISITSNKCPKKDSDSFKIRPLGFTEEVEVILQYICE
type: DOMAIN
name: Integrin_bsu_VWA
description: Integrin beta subunit, VWA domain

phrase: RCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDLEALKKKGC
type: DOMAIN
name: PSI
description: PSI domain

phrase: CAGHKECVQCRAFNKGEKKDTCTQECSYFNITKVESRDKLPQPVQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVENPECPTGP
type: DOMAIN
name: Integrin_bsu_tail
description: Integrin beta subunit, tail

phrase: KLLMIIHDRREFAKFEKEKMNAKWDTGENPIYKSAVTTVVNPK
type: DOMAIN
name: Integrin_bsu_cyt_dom
description: Integrin beta subunit, cytoplasmic domain

phrase: VCAGHKECVQCRAFNKGEKKDTCTQECSYFNITKVESRDKLPQPVQPDPVSHCKEKDVDDCWFYFTYSVNGNNEVMVHVVENPECPTG
type: DOMAIN
name: Integrin_bsu_tail
description: Integrin beta subunit, tail

phrase: AEDYPIDLYYLMDLSYSMKDDLENVKSLGTDLMNEMRRITSDFRIGFGSFVEKTVMPYISTTPVKLRNPCTSEQNCTSPFSYKNVLSLTNKGEVFNELVGKQRISGNLDSPEGGFDAIMQVAVCGSLIGRRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGQCHLENNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQPVYKELKNLIPKSAVGTLSANSSNVIQLIIDAYNSLSSE
type: DOMAIN
name: Integrin_bsu_VWA
description: Integrin beta subunit, VWA domain

phrase: NRCLKANAKSCGECIQAGPNCGWCTNSTFLQEGMPTSARCDDLEALKKKGC
type: DOMAIN
name: Integrin_beta_N
description: Integrin beta N-terminal

phrase: CEASNGQICNGRGICECGVCKCTDPKFQGQT
type: DOMAIN
name: EGF_extracell
description: EGF-like domain, extracellular

phrase: CQSEGIPESPKCHEGNGTFECGACRCNEG
type: DOMAIN
name: I-EGF_1
description: Integrin beta, epidermal growth factor-like domain 1

phrase: KLLMIIHDRREFAKFEKEKMNAKWDTGENPIYKSAVTTVVNPKYEG
type: DOMAIN
name: Integrin_bsu_cyt_dom
description: Integrin beta subunit, cytoplasmic domain
Protein sequence:
MGRFSFNRYGYNTMQMESVESEKTRFEVECEFVQALANPNYLNFLAQRGYFKEEYFVNYLKYLLYWKDPQYARCLKFPQCLHMLEALQSQQFRDSMAYGPSAKFVEDQVVLQWQFYLRKRHRLCMMPDEGQELEESEDEADIRQKDTEDEDDEETMKKPDADTAEKNSTTSTVSKKEK

Annotated regions:
Protein sequence:
MAENNGNGSTGAADTGQRQRFQIAKMYLRDVSFEAPGAPEAFRDEWKPQMDVELGTRHQPLGENTYDVVLTITVTARNNERTAYLCEVKQGGVFRLEGFPEADMERVLGAYCPAQLFPFAREAINDLVVKGGFPQLLLAPVNFESLYQQQKQRREQGTSDSAPSGSPDNGGRQ

Annotated regions:
Protein sequence:
MEDIVIATNNQGKINDFKAIFKNQHVIGISELIEDFDVEETGATFEENARLKSEAAAHALNKRVIADDSGLEVFALNGEPGVYSARYAGLGKNDEDNIEKLLTNLEDVQDRRAQFVCVISMSAPNEKTKTFKGTVSGVITTERHGKNGFGYDPIFFVPELNKTMAEITNDEKGKISHRGNAIRLLKEYLEGEQHV

Annotated regions:
Protein sequence:
MLLHIPGLFDADELARICEALERADWADGKVTAGYQSAKAKHNLQLPEGHALAKEIGSALIDRLWKTPRFMSAALPHKVFPPLINCYREGGNFGFHIDNALRQPKGSPERVRTDLSSTLFLSDPESYDGGELVIQDTYGVQQVKLAAGDMVLYPGTSLHKVNPVTRGQRYAAFFWTQSLVRDDSQRTLLFEMDNAIQQLTADVPDHPSLLQLTGTYHNLLRRWAEV

Annotated regions:
phrase: INCYREGGNFGFHIDNALRQPKGSPERVRTDLSSTLFLSDPESYDGGELVIQDTYGVQQVKLAAGDMVLYPGTSLHKVNPVTRGQRYAAFFW
type: DOMAIN
name: Pro_4_hyd_alph_FE2OG_OXY
description: Prolyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domain

phrase: DSQRTLLFEMDNAIQQLTADVPDHPSLLQLTGTYHNLLRRWA
type: DOMAIN
name: PKHD_C
description: PKHD-type hydroxylase C-terminal domain

phrase: MLLHIPGLFDADELARICEALERADWADGKVTAGYQSAKAKHNLQLPEGHALAKEIGSALIDRLWKTPRFMSAALPHKVFPPLINCYREGGNFGFHIDNALRQPKGSPERVRTDLSSTLFLSDPESYDGGELVIQDTYGVQQVKLAAGDMVLYPGTSLHKVNPVTRGQRYAAFFWT
type: DOMAIN
name: Pro_4_hyd_alph
description: Prolyl 4-hydroxylase, alpha subunit

phrase: KVFPPLINCYREGGNFGFHIDNALRQPKGSPERVRTDLSSTLFLSDPESYDGGELVIQDTYGVQQVKLAAGDMVLYPGTSLHKVNPVTRGQRYAAFFWTQ
type: DOMAIN
name: Oxoglu/Fe-dep_dioxygenase_dom
description: Oxoglutarate/iron-dependent dioxygenase domain
Protein sequence:
MARDLLFEIGTEEMPAGLIGKIRSDLKDLAINTLEDKRLDFKECKVFSTPRRLVLFVKELAEKQEEKREVVKGPARSIAFEDDGTPTRAAKGFSRAQGVEVDDLIIKDDYVYVEKIEQGQDTAGLLKDILPGLINKLPLPRSMRWADYNFKFIRPIRWLLALFGEEIISFSMAGVQSGAYTRGHRFLVKDRLEVKDPDHYFDVMEKGYIIVDHNKRRELILKQIREIEKEIGKVMVEDDLLTEVVDLVEYPTAFYGKFDRSYLELPDDVLITSMAEHQRYFPVIDEDGSLSPYFVGVRDGIEDYIEEVRYGNEMVLRARLADARFFFEEDLKVSIEERQKELEEIVFQEDLGSMMDKVKRLKQLVIQIGKSLNLKESQLQSLIRAAELSKNDLVTEMVNEFTKLQGVMGREYALINGEDEEVATAIYEQYLPRYSGDRLPQTLYGRILSIADKIDNITSHFSLGMIPSGSQDPFALRRQANGIVNIIIDAQLPLKLSSLLNWSIEVLEPGDKDFVNEEKSFLLQRLETILDERGIRYDIINSVVRVGDDDPNNILSRAEAVMSLRKENPDLFVDLIQGLVRARNLASKGEGNNDINPEYFECREEKELYDIYRKIKDEIQRQFKKKNYLSGLKKLVDVKEPVDNFLDNVVVMVEDERIKNNRLALLQEISNLVSGVMNISEIALDD

Annotated regions:
phrase: LVRARNLASKGEGNNDINPEYFECREEKELYDIYRKIKDEIQRQFKKKNYLSGLKKLVDVKEPVDNFLDNVVVMVEDERIKNNRLALLQEISNLVSGVMN
type: DOMAIN
name: DALR_anticod-bd
description: DALR anticodon binding
Protein sequence:
MSRYRGPRFKKIRRLGALPGLTSKRPRSGSDFKNQSRFGKKSQYRIRLEEKQKLRFHYGLTEQQLLRYVHIAGKAKGSTDQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRHILVNGRIVDIPSYRCKPRDIITSKDKQRSKVLIQNSIESSPHEELPKHLTIDSFQYKGLVNQIIDSKLIGLKINELLVVEYYSRQT

Annotated regions:
phrase: RYRGPRFKKIRRLGALPGLTSKRPRSGSDFKNQSRFGKKSQYRIRLEEKQKLRFHYGLTEQQLLRYVHIAGKAKGSTDQVLLQLL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: RYRGPRFKKIRRLGALPGLTSKRPRSGSDFKNQSRFGKKSQYRIRLEEKQKLRFHYGLTEQQLLRYVHIAGKAKGSTDQVLLQLL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: MRLDNILFRLGMASTIPAARQLVNHRHILVNGRIVDIPSYRCKPRDIITSKDKQRSKVLIQNS
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: LEMRLDNILFRLGMASTIPAARQL
type: CONSERVED_SITE
name: Ribosomal_uS4_CS
description: Small ribosomal subunit protein uS4, conserved site

phrase: MRLDNILFRLGMASTIPAARQLVNHRHILVNGRIVDIPSYRCKPRDI
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain
Protein sequence:
MLPAVKTVEAEEEYAEDCPELVPIETKNQEEENLDFITKIPVTIVTGYLGAGKTTLLNYILTEQHNRKIAVILNEFGEGSAVEKSLAVSQGGELYEEWLELRNGCLCCSVKDSGLRAIENLMQKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITVVDSKYGLKHLTEEKPDGLVNEATRQVALADMILINKTDLVSEEELNNLRTTIRSINGLGKVLETQRSRVHLSNILDLHAYDILSGISLQKKLQHVSTAPHLDQSIVTVTFEVPGSAKEECLNVFIQNLLWEKNVKNKDGHCMEVIRLKGLVSIKDKPQQMIVQGIHELYDLEESLVNWKDDAERACQLVFIGRNLDKDVLQQLFLTAVAEAEEQRTAPGRDGVCPSH

Annotated regions:
phrase: IVTVTFEVPGSAKEECLNVFIQNLLWEKNVKNKDGHCMEVIRLKGLVSIKDKPQQMIVQGIHELYDLEESLVNWKDDAERACQLVFIGRNLDKDVLQQLFL
type: DOMAIN
name: CobW-like_C
description: Zinc chaperone CobW-like, C-terminal

phrase: PVTIVTGYLGAGKTTLLNYILTEQHNRKIAVILNEFGEGSAVEKSLAVSQGGELYEEWLELRNGCLCCSVKDSGLRAIENLMQKKGKFDYILLETTGLADPGAVASMFWVDAELGSDIYLDGIITVVDSKYGLKHLTEEKPDGLVNEATRQVALADMILINKTDLVSEEELNNLRTTIRSINGLGK
type: DOMAIN
name: CobW/HypB/UreG_nucleotide-bd
description: CobW/HypB/UreG, nucleotide-binding domain
Protein sequence:
MSAISGRQLHKFGGSSLADPACYRRVVTILQEYSGNHDLVVVSAAGKTTNQLIDWVAQLDKDGRQAHETLQQIRAFQQQLIEQLVEGEAADALLTQLHFELGELARWGESPLSEAQVASVLGHGEVWSARLLAALLTQQQLPATSLDSRLFLRAERAAQPEVDRGQSWPLLQAQLAQIQQQRVVITGFMAADQAGDTVLLGRNGSDYSATVIGALADVSRVTIWSDVAGVYSADPRKVEDACLLPLLRLDEASELARLAAPVLHSRTLQPVAQSAIDLTLRCSHLPESGSTRVERVLASGRGAKIITSLDDVCLIALTIPRSHDISLVEAELERILSRAQLQPLAQSVEADKGRIQLAYTGEVVNSVLALLQDSGIAAELRLRDGFSLVAAVGAGVVNNAIHCYGFYQQLKGQPVEFMAESGSGLSLVAVLRKADTDSLLPRIHQSLFQAQKRIGLVLCGKGNIGSRWLSLYNTQRAALEKRHGMSFTLIGVVDSSRLWIDLAGIEPQAALDHFDDEAEAYAPGAWIETVAAHEYDEVMVLDVTASEELSARYTQIAEAGLHLISANKVAGSASGEQYHAVIDAFAKNSRFWLYNATVGAGLPVNHTVRDLTESGDEIIALSGIFSGTLSWLFQQYDGSIPFSQLVEVAWQQGLTEPDPRHDLDGSDVMRKLVILARESGLTLEPEQVKVETLVPASLAELSLDAFFEQAAELDELLLERLLKAQKEDKVLRYVARLDRHGKAAVGVEALPAEHALANLLPCDNIFAI

Annotated regions:
phrase: RQLHKFGGSSLADPACYRRVVTILQEYSGNHDLVVVSAAGKTTNQLIDWVAQLDKDGRQAHETLQQIRAFQQQLIEQLVEGEAADALLTQLHFELGELARWGESPLSEAQVASVLGHGEVWSARLLAALLTQQQLPATSLDSRLFLRAERAAQPEVDRGQSWPLLQAQLAQIQQQRVVITGFMAADQAGDTVLLGRNGSDYSATVIGALADVSRVTIWSDVAGVYSADPRKVEDACLLPLLRLDEASELARLAAPVLHSRTLQPVAQSAID
type: DOMAIN
name: Asp/Glu/Uridylate_kinase
description: Aspartate/glutamate/uridylate kinase

phrase: LHKFGGSS
type: CONSERVED_SITE
name: Aspartate_kinase_CS
description: Aspartate kinase, conserved site

phrase: AWQQGLTEPDPRHDLDGSDVMR
type: CONSERVED_SITE
name: HDH_CS
description: Homoserine dehydrogenase, conserved site

phrase: GKGNIGSRWLSLYNTQRAALEKRHGMSFTLIGVVDSSRLWIDLAGIEPQAALDHFDDEAEAYAPGAWIETVAAHEYDEVMVLDVTASEELSARYTQIAEAGLHLISANKVAGSASGEQYHAVIDAFAKNSRFWL
type: DOMAIN
name: Asp/hSer_DH_NAD-bd
description: Aspartate/homoserine dehydrogenase, NAD-binding

phrase: PVNHTVRDLTESGDEIIALSGIFSGTLSWLFQQYDGSIPFSQLVEVAWQQGLTEPDPRHDLDGSDVMRKLVILARESGLTLEPEQVKVETLVPASLAELSLDAFFEQAAELDELLLERLLKAQKEDKVLRYVARLDRHGKAAVGVEALPAEHALANLLPCDNIF
type: DOMAIN
name: HDH_cat
description: Homoserine dehydrogenase, catalytic

phrase: LHKFGGSSLADPACYRRVVTILQEYSGNHDLVVVSAAGKTTNQLIDWVAQLDKDGRQAHETLQQIRAFQQQLIEQLVEGEAADALLTQLHFELGELARWGESPLSEAQVASVLGHGEVWSARLLAALLTQQQLPATSLDSRLFLRAERAAQPEVDRGQSWPLLQAQLAQIQQQRVVITGFMAADQAGDTVLLGRNGSDYSATVIGALADVSRVTIWSDVAGVYSADPRKVEDACLLPLLRLDEASELARLAAPVLHSRTLQPVAQSAIDLTLRCSHLPESGSTRVERVLASGRGAKIITSLDDVCLIALTIPRSHDISLVEAELERILSRAQLQPLAQSVEADKGRIQLAYTGEVVNSVLALLQDSGIAAELRLRDGFSLVAAVGAGVVNNAIHCYGFYQQLKGQPVEFMAESGSGLSLVAVLRKADTDSLLPRIHQSLFQAQKRIGLVLCGKGNIGSRWLSLYNTQRAALEKRHGMSFTLIGVVDSSRLWIDLAGIEPQAALDHFDDEAEAYAPGAWIETVAAHEYDEVMVLDVTASEELSARYTQIAEAGLHLISANKVAGSASGEQYHAVIDAFAKNSRFWLYNATVGAGLPVNHTVRDLTESGDEIIALSGIFSGTLSWLFQQYDGSIPFSQLVEVAWQQGLTEPDPRHDLDGSDVMRKLVILARESGLTLEPEQVKVETLVPASLAELSLDAFFEQAAELDELLLERLLKAQKEDKVLRYVARLDRHGKAAVGVEALPAEHALANLLPCDNIFA
type: DOMAIN
name: Bifunc_Aspkin/hSer_DH
description: Bifunctional aspartokinase/homoserine dehydrogenase, homoserine dehydrogenase domain
Protein sequence:
MNVVTPNGGDSVAARSWPGLLNPLLRGEDLSAEETAWAMDRIMSGEATDAQIAGFAVALRAKGETVDEVTGLVRAMYAHANTIEVPGRTVDIVGTGGDLAKTVNISTMSAIVIAGTGAKVVKHGNRAASSASGSSDVLEKLGVNLELTPRRVVEVAEAAGITFCFAVKFHPALRYAAKARKELGAQTTFNILGPLTNPAQVRSQAVGVADARMAPIVAGVLADRGNSALVFRGDDGLDELTTTATSRVWVVRDGVVREEPFDPRDVGLPIVPVEALRGADASYNADVARRLLDGEAGAVREAVLLNSAAALVALDPGTGTLTEQLAAKILVAAEAIDSGAAKQALERWIAASNA

Annotated regions:
phrase: RTVDIVGTGGDLAKTVNISTMSAIVIAGTGAKVVKHGNRAASSASGSSDVLEKLGVNLELTPRRVVEVAEAAGITFCFAVKFHPALRYAAKARKELGAQTTFNILGPLTNPAQVRSQAVGVADARMAPIVAGVLADRGNSALVFRGDDGLDELTTTATSRVWVVRDGVVREEPFDPRDVGLPIVPVEALRGADASYNADVARRLLDGEAGAVREAVLLNSAAALVALDPGTGTLTEQLAAKILVAAEAIDSGA
type: DOMAIN
name: Glycosyl_Trfase_fam3
description: Glycosyl transferase, family 3

phrase: LLNPLLRGEDLSAEETAWAMDRIMSGEATDAQIAGFAVALRAKGETVDEVTGLVRAMYAH
type: DOMAIN
name: Glycosyl_Trfase_fam3_N_dom
description: Glycosyl transferase family 3, N-terminal domain
Protein sequence:
MAGQAFRKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGGKGKSGEIEPVSVKVGDKVLLPEYGGTKVVLDDKDYFLFRDSDILGKYVD

Annotated regions:
phrase: FLPLFDRVLVERSAAETVTKGGIM
type: CONSERVED_SITE
name: Chaprnonin_Cpn10_CS
description: Chaperonin GroES, conserved site
Protein sequence:
MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAVAIKRPQLKGLINGVLRQFQRQQDELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRVNRTHHSRDSWLALLDEAGMKGFPHADYPDAVQLETPAPVHALPGFEEGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVLAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKSGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIKK

Annotated regions:
phrase: IVEANNQRPPMWLRVNRTHHSRDSWLALLDEAGMKGFPHADYPDAVQLETPAPVHALPGFEEGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVLAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKSGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIK
type: DOMAIN
name: MeTrfase_RsmB-F_NOP2_dom
description: SAM-dependent methyltransferase RsmB-F/NOP2-type domain

phrase: HPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRVNRTHHSRDSWLALLDEAGMKGFPHADYPDAVQLETPAPV
type: DOMAIN
name: RsmB-like_ferredoxin
description: Ribosomal RNA small subunit methyltransferase B-like, ferredoxin-like domain

phrase: MTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVLAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKSGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAK
type: DOMAIN
name: MeTrfase_RsmB-F_NOP2_cat
description: SAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic core

phrase: RNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAVAIKRPQLKGLINGVLRQFQRQ
type: DOMAIN
name: RsmB-like_N
description: Ribosomal RNA small subunit methyltransferase B-like, N-terminal domain

phrase: NLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAVAIKRPQLKGLINGVLRQFQ
type: DOMAIN
name: NusB_RsmB_TIM44
description: NusB/RsmB/TIM44

phrase: FDRILLDAPCS
type: CONSERVED_SITE
name: RsmB/NOL1/NOP2-like_CS
description: RsmB/NOL1/NOP2-like, conserved site
Protein sequence:
MKVAVVGATGMVGEVMLQVLAERDFPISELLLVASERSVGKTLTYKGEEHTVIGLADAVAAQPDIAIFSAGGDTSLEWAPKFAEVGTTVIDNSSAWRMDPTKKLVVPEINANELTAEDKIIANPNCSTIQLVMVLDPLHKKYGMKRVVVSTYQSVSGTGLKAVQQMENEAAGIESDMAYPYPINRNALPHCDVFLENGYTKEEMKLAREPQKILDDRTFSVTATAVRIPTAGGHSESVNIEFLNDFELADVRQLLSETPGVVVQDNTDTNTYPMPMFAHGKDDVFVGRIRRDETQPNTLNMWIVADNLRKGAATNAVQIAEYLVENKLVSNTSEAIS

Annotated regions:
phrase: KVAVVGATGMVGEVMLQVLAERDFPISELLLVASERSVGKTLTYKGEEHTVIGLADAVAAQPDIAIFSAGGDTSLEWAPKFAEVGTTVIDNSSAWRMDPTKKLVVPEINANEL
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: KVAVVGATGMVGEVMLQVLAERDFPISELLLVASERSVGKTLTYKGEEHTVIGLADAVAAQPDIAIFSAGGDTSLEWAPKFAEVGTTVIDNSSAWRMDPTKKLVVPEINANELTA
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: LDPLHKKYGMKRVVVSTYQSVSGTGLKAVQQMENEAAGIESDMAYPYPINRNALPHCDVFLENGYTKEEMKLAREPQKILDDRTFSVTATAVRIPTAGGHSESVNIEFLNDFELADVRQLLSETPGVVVQDNTDTNTYPMPMFAHGKDDVFVGRIRRDETQPNTLNMWIVADNLR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain
Protein sequence:
MAIDEDKQKAISLAIKQIDKIFGKGALVRLGDKQVEKIDSISTGSLGLDLALGIGGVPKGRIIEIYGPESSGKTTLSLHIIAECQKNGGVCAFIDAEHALDVHYAKRLGVDTENLLVSQPDTGEQALEILETITRSGGIDLVVVDSVAALTPKAEIDGDMGDQHVGLQARLMSHALRKITGVLHKMNTTLIFINQIRMKIGMMGYGSPETTTGGNALKFYASVRIDIRRIAALKQNEQHIGNRAKAKVVKNKVAPPFREAEFDIMFGEGISKEGEIIDYGVKLDIVDKSGAWLSYQDKKLGQGRENAKALLKEDKALANEITLKIKESIGSNEEIMPLPDEPLEEME

Annotated regions:
phrase: ALKFYASV
type: CONSERVED_SITE
name: DNA_recomb/repair_RecA_CS
description: DNA recombination/repair protein RecA, conserved site

phrase: KAISLAIKQIDKIFGKGALVRLGDKQVEKIDSISTGSLGLDLALGIGGVPKGRIIEIYGPESSGKTTLSLHIIAECQKNGGVCAFIDAEHALDVHYAKRLGVDTENLLVSQPDTGEQALEILETITRSGGIDLVVVDSVAALTPKAEIDGDMGDQHVGLQARLMSHALRKITGVLHKMNTTLIFINQIRMKIGMMGYGSPETTTGGNALKFYASVRIDIRRIAALKQNEQHIGNRAKAKVVKNKVAPPFREAEFDIMFGEGI
type: DOMAIN
name: RecA-like_N
description: RecA-like, N-terminal

phrase: KIDSISTGSLGLDLALGIGGVPKGRIIEIYGPESSGKTTLSLHIIAECQKNGGVCAFIDAEHALDVHYAKRLGVDTENLLVSQPDTGEQALEILETITRSGGIDLVVVDSVAALTPKAEIDGDMGDQHVGLQARLMSHALRKITGVLHKMNTTLIFINQ
type: DOMAIN
name: RecA_ATP-bd
description: DNA recombination and repair protein RecA-like, ATP-binding domain

phrase: KGRIIEIYGPESSGKTTLSLHIIAECQKNGGVCAFIDAEHALDVHYAKRLGVDTENLLVSQPDTGEQALEILETITRSGGIDLVVVDSVAALTPKAEIDGDMGDQHVGLQARLMSHALRKITGVLHKMNTTLIFINQIRMKIGMMGYGSPETTTGGNALKFYASVRIDIRRI
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: GEIIDYGVKLDIVDKSGAWLSYQDKKLGQGRENAKALLKEDKALANEITLKIKES
type: DOMAIN
name: RecA-like_C
description: RecA-like, C-terminal

phrase: YGSPETTTGGNALKFYASVRIDIRRIAALKQNEQHIGNRAKAKVVKNKVAPPFREAEFDIMFGEGISKEG
type: DOMAIN
name: RecA_monomer-monomer_interface
description: DNA recombination and repair protein RecA, monomer-monomer interface
Protein sequence:
MSKLVLILNCGSSSLKFAILDPATGEEKLSGLAEAFFLPEARIKWKLNGEKGNADLGAGAAHTEALNFIASNILNDELKNSIAAIGHRIVHGGEKYTQSVIVTDEVVKGIEDAAQFAPLHNPAHLIGIREAFKAFPHLKDKNVVVFDTAFHQTMPEEAFLYALPYSLYKEHGVRRYGAHGTSHYFVSREVAEYVGKPADQVNAIICHLGNGGSVSVVRNGQCIDTSMGLTPLEGLVMGTRCGDIDPAIVFYLYKTLGMSMDQIEETLVKKSGLLGLTEVTSDCRYAEDNYDDESKPETKRALNVYSYRLAKYIGAYMAVLGDDHLDAIAFTGGIGENSAHVRELALNHLKLFGIKIDHERNLATRFGKDGVITTDDSAFKAIVLPTNEELVIAQDTAKLCF

Annotated regions:
phrase: VLILNCGSSSL
type: CONSERVED_SITE
name: Aliphatic_acid_kinase_CS
description: Aliphatic acid kinase, short-chain, conserved site

phrase: AIICHLGNGGSVSVVRN
type: CONSERVED_SITE
name: Aliphatic_acid_kinase_CS
description: Aliphatic acid kinase, short-chain, conserved site
Protein sequence:
MSAKLKQLEDILRPVVEGLGYEFWGIEFRSHGHHSKLRVFIDDAENGIAIDDCEKVSRQVSGVMDVEDPIQTEYTLEVSSPGMDRPLFRLEQYEAFIGHKVQIKLRMAFEGRRKFLGLIKGVEGDDVVVVVDDHEYLLPFDSIEKANIVPVFE

Annotated regions:
phrase: ILRPVVEGLGYEFWGIEFRSHGHHSKLRVFIDDAENGIAIDDCEKVSRQVSGVMDVEDPIQTEYTLEVSSPGM
type: DOMAIN
name: RimP_N
description: Ribosome maturation factor RimP, N-terminal

phrase: GMDRPLFRLEQYEAFIGHKVQIKLRMAFEGRRKFLGLIKGVEGDDVVVVVDDHEYLLPFDSIEKANIVPV
type: DOMAIN
name: RimP_C
description: Ribosome maturation factor RimP, C-terminal

phrase: LFRLEQYEAFIGHKVQIKLRMAFEGRRKFLGLIKGVEGDDVVVVVDDHEYLLPFDSIEKANIVPV
type: DOMAIN
name: RimP_C
description: Ribosome maturation factor RimP, C-terminal
Protein sequence:
WLFSVGLLLATGTSQDVTSQARDFLKQFELEAEIIYHQSALAQWEYNTNITDENAQKMSEAGAKWSEFYTKASKASEAFNKDDITDPSIKLQLIFLSEKGSAILPANKYARLNQVLNEMSTIYSTHTVCKADGAKDCLQLEPGLDLIMAESTDYEERLWAWEGWRAGAGKKMRSLYEEYVDLENEAARLNGYNDYGDYWRGNYETLAADKYAYSRDDLIQDVERTYQEILPLYKELHAYVRGNLQKVYGSQYISDTGCLPAHLLGDMWGRFWTNLYPLMIPYANKESIDVTPNMVAQGWTIERMFKEAEIFFKSVDLFALNENFWNNSMLEEPKDGRQVVCHPTAWDLGMNDFRIKMCTKVNMEDFLTVHHELGHIQYDMAYAKQPFMLRDGANEGFHEAVGEIMSLSAATPKHLKHIKLLDENFIEDQEVEINFLLRQALAIVGTLPFTYMLEQWRWKAFRGEIPKEQWMKTWWQMKRDLVGVVEPVPHDETYCDPPALFHVSNDYSFIRYYTRTIYQFQFQDALCKAAGHTGPLHSCDITNSKEAGAKLRAMLELGKAKSWTEALESITGGTKMDSQPLLKYFEPLFVWLQKNNKDNGRKSTWNTAWTPFSEAESIKVRISLKSGLGDNAYEWNANEMYLFKSSIAYALSKYYSVIMKQDIPFTYENVHVYDETPRVSFMFYVTMSNNTVVSKLEVENAVRLSKDRINSIFKLDDNALEFVGIPPTLAAPAEQPVTVWLVVFGIVAGIIVVALIVLIVLGHKDRQK

Annotated regions:
phrase: EAESIKVRISLKSGLGDNAYEWNANEMYLFKSSIAYALSKYYSVIMKQDIPFTYENVHVYDETPRVSFMFYVTMSNNTVVSKLEVENAVRLSKDRINSIFKLDDNALEFVGIPPTLAAPAEQPVTVWLVVFGIVAGIIVVALIVLIVLGHKDRQ
type: DOMAIN
name: Collectrin_dom
description: Collectrin domain

phrase: SIKVRISLKSGLGDNAYEWNANEMYLFKSSIAYALSKYYSVIMKQDIPFTYENVHVYDETPRVSFMFYVTMSNNTVVSKLEVENAVRLSKDRINSIFKLDDNALEFVGIPPTLAAPAEQPVTVWLVVFGIVAGIIVVALIVLIVLGHKDRQ
type: DOMAIN
name: Collectrin_dom
description: Collectrin domain
Protein sequence:
MLNSHNTNHNNNSASNSNYNKGHKMHLKSATAKATIMKHKLSKFYGYGWMQVFLLLTVLVIGNQSAWQENIRPKLYVELGPEDVLKFVGNESVVDHFKLVTKDGNSLLIGARNTVFNLSIHDLVEQQRLVWTSPEDDTKMCLVKGKDEEACQNYIRIMVVPSPGRLFVCGTNSFRPMCNTYIISDSNYTLEATKNGQAVCPYDPRHNSTSVLADNELYSGTVADFSGSDPIIYREPLQTEQYDSLSLNAPNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVCKWDKGGPHRFRNRWTSFLKSRLNCSIPGDYPFYFNEIQSASNLVEGQYGSMSSKLIYGVFNTPSNSIPGSAVCAFALQDIADTFEGQFKEQTGINSNWLPVNNAKVPDPRPGSCHNDSRALPDPTLNFIKTHSLMDENVPAFFSQPILVRTSTIYRFTQIAVDAQIKTPGGKTYDVIFVGTDHGKIIKSVNAESADSADKVTSVVIEEIDVLTKSEPIRNLEIVRTMQYDQPKDGSYDDGKLIIVTDSQVVAIQLHRCHNDKITSCSECVALQDPYCAWDKIAGKCRSHGAPRWLEENYFYQNVATGQHAACPSGKINSKDANAGEQKGFRNDMDLLDSRRQSKDQEIIDNIDKNFEDIINAQYTVETLVMAVLAGSIFSLLVGFFTGYFCGRRCHKDEDDNLPYPDTEYEYFEQRQNVNSFPSSCRIQQEPKLLPQVEEVTYAEPVLLPQPPPPNKMHSPKNTLRKPPMHQMHQGPNSE

Annotated regions:
phrase: ESVVDHFKLVTKDGNSLLIGARNTVFNLSIHDLVEQQRLVWTSPEDDTKMCLVKGKDEEACQNYIRIMVVPSPGRLFVCGTNSFRPMCNTYIISDSNYTLEATKNGQAVCPYDPRHNSTSVLADNELYSGTVADFSGSDPIIYREPLQTEQYDSLSLNAPNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVCKWDKGGPHRFRNRWTSFLKSRLNCSIPGDYPFYFNEIQSASNLVEGQYGSMSSKLIYGVFNTPSNSIPGSAVCAFALQDIADTFEGQFKEQTGINSNWLPVNNAKVPDPRPGSCHNDSRALPDPTLNFIKTHSLMDENVPAFFSQPILVRTSTIYRFTQIAVDAQIKTPGGKTYDVIFVGTDHGKIIKSVNAESADSADKVTSVVIEEIDVLTKSEPIRNLEIVRTMQYDQPKDGSYDDGKLIIVTDSQVVAIQLHR
type: DOMAIN
name: SEM1A_sema_dom
description: Semaphorin-1A, sema domain

phrase: HFKLVTKDGNSLLIGARNTVFNLSIHDLVEQQRLVWTSPEDDTKMCLVKGKDEEACQNYIRIMVVPSPGRLFVCGTNSFRPMCNTYIISDSNYTLEATKNGQAVCPYDPRHNSTSVLADNELYSGTVADFSGSDPIIYREPLQTEQYDSLSLNAPNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVCKWDKGGPHRFRNRWTSFLKSRLNCSIPGDYPFYFNEIQSASNLVEGQYGSMSSKLIYGVFNTPSNSIPGSAVCAFALQDIADTFEGQFKEQTGINSNWLPVNNAKVPDPRPGSCHNDSRALPDPTLNFIKTHSLMDENVPAFFSQPILVRTSTIYRFTQIAVDAQIKTPGGKTYDVIFVGTDHGKIIKSVNAESADSADKVTSVVIEEIDVLTKSEPIRNLEIVRT
type: DOMAIN
name: Semap_dom
description: Sema domain

phrase: KLYVELGPEDVLKFVGNESVVDHFKLVTKDGNSLLIGARNTVFNLSIHDLVEQQRLVWTSPEDDTKMCLVKGKDEEACQNYIRIMVVPSPGRLFVCGTNSFRPMCNTYIISDSNYTLEATKNGQAVCPYDPRHNSTSVLADNELYSGTVADFSGSDPIIYREPLQTEQYDSLSLNAPNFVSSFTQGDFVYFFFRETAVEFINCGKAIYSRVARVCKWDKGGPHRFRNRWTSFLKSRLNCSIPGDYPFYFNEIQSASNLVEGQYGSMSSKLIYGVFNTPSNSIPGSAVCAFALQDIADTFEGQFKEQTGINSNWLPVNNAKVPDPRPGSCHNDSRALPDPTLNFIKTHSLMDENVPAFFSQPILVRTSTIYRFTQIAVDAQIKTPGGKTYDVIFVGTDHGKIIKSVNAESADSADKVTSVVIEEIDVLTKSEPIRNLEIVRTMQYDQPKDGSYDDGKLIIVTDSQVVAIQ
type: DOMAIN
name: Semap_dom
description: Sema domain

phrase: RCHNDKITSCSECVALQDPYCAWDKIAGKCRSHGAPRWLEENYFYQNVATGQHAAC
type: DOMAIN
name: PSI
description: PSI domain

phrase: CHNDKITSCSECVALQDPYCAWDKIAGKCRSHGAPRWLE
type: REPEAT
name: Plexin_repeat
description: Plexin repeat

phrase: IQSASNLVEGQYGSMSSKLIYGVFNTPSNSIPGSAVCAFALQDIADTFEGQFKEQTGINSNWLPVNNAKVPDPRPGSCHNDSRALPDPTLNFIKTHSLMDENVPAFFSQPILVRTSTIYRFTQIAVDAQIKTPGGKTYDVIFVGTDHGKIIKSVNAESADSADKVTSVVIEEIDVLTKSEPIRNLEI
type: DOMAIN
name: Semap_dom
description: Sema domain
Protein sequence:
MRLTAKQITWLKVCLHLAGFLPLLWLFWAINHGGLSADPVKDIQHFTGRTALKFLLATLLVSPLARYAKQPLLIRTRRLLGLWCFVWATLHLTSYALLELGIHNLALLGSELISRPYLTLGIISWLVLLALTLTSTQFAQRKLGKRWQTLHNVVYLVAILAPIHYLWSVKILSPQPVIYAALALALLALRYRRFRQWWR

Annotated regions:
phrase: TGRTALKFLLATLLVSPLARYAKQPLLIRTRRLLGLWCFVWATLHLTSYALLELGIHNLALLGSELISRPYLTLGIISWLVLLALTLTSTQFAQRKLGKRWQTLHNVVYLVAIL
type: DOMAIN
name: Fe3_Rdtase_TM_dom
description: Ferric reductase transmembrane component-like domain
Protein sequence:
MFPLIILISFSLASLSETATGAVTNLSACLINHNVHNFSIYPTSRNYFNLLHFSLQNLRFAAPFMPKPTFIILPSSKEELVSTIFCCRKASYEIRVRCGGHSYEGTSYVSFDASPFVIVDLMKLDDVSVDLDSETAWAQGGATIGQIYYAIAKVSDVHAFSAGSGPTVGSGGHISGGGFGLLSRKFGLAADNVVDALLIDADGRLLDRKAMGEDVFWAIRGGGGGNWGIVYAWKIRLLKVPKIVTTCMIYRPGSKQYVAQILEKWQIVTPNLVDDFTLGVLLRPADLPADMKYGNTTPIEIFPQFNALYLGPKTEVLSISNETFPELGVKNDECKEMTWVESALFFSELADVNGNSTGDISRLKERYMDGKGFFKGKTDYVKKPVSMDGMLTFLVELEKNPKGYLVFDPYGGAMDKISDQAIAFPHRKGNLFAIQYLAQWNEEDDYMSDVYMEWIRGFYNTMTPFVSSSPRGAYINYLDMDLGVNMVDDYLLRNASSSSPSSSVDAVERARAWGEMYFLHNYDRLVKAKTQIDPLNVFRHEQSIPPMLGSTQEHKYSSE

Annotated regions:
phrase: AYINYLDMDLGVNMVDDYLLRNASSSSPSSSVDAVERARAWGEMYFLHNYDRLVKAKTQIDPLNVFRHEQSI
type: DOMAIN
name: BBE
description: Berberine/berberine-like

phrase: FMPKPTFIILPSSKEELVSTIFCCRKASYEIRVRCGGHSYEGTSYVSFDASPFVIVDLMKLDDVSVDLDSETAWAQGGATIGQIYYAIAKVSDVHAFSAGSGPTVGSGGHISGGGFGLLSRKFGLAADNVVDALLIDADGRLLDRKAMGEDVFWAIRGGGGGNWGIVYAWKIRLLK
type: DOMAIN
name: FAD-bd_PCMH
description: FAD-binding domain, PCMH-type

phrase: PTFIILPSSKEELVSTIFCCRKASYEIRVRCGGHSYEGTSYVSFDASPFVIVDLMKLDDVSVDLDSETAWAQGGATIGQIYYAIAKVSDVHAFSAGSGPTVGSGGHISGGGFGLLSRKFGLAADNVVDALLIDADGRL
type: DOMAIN
name: Oxid_FAD_bind_N
description: FAD linked oxidase, N-terminal