nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MAVVSAVRWLGLRSRLGQPLTGRRAGLCEQARSCRFYSGSATLSKVEGTDVTGIEEVVIPKKKTWDKVAVLQALASTVNRDTTAVPYVFQDDPYLMPASSLESRSFLLAKKSGENVAKFIINSYPKYFQKDIAEPHIPCLMPEYFEPQIKDISEAALKERIELRKVKASVDMFDQLLQAGTTVSLETTNSLLDLLCYYGDQEPSTDYHFQQTGQSEALEEENDETSRRKAGHQFGVTWRAKNNAERIFSLMPEKNEHSYCTMIRGMVKHRAYEQALNLYTELLNNRLHADVYTFNALIEATVCAINEKFEEKWSKILELLRHMVAQKVKPNLQTFNTILKCLRRFHVFARSPALQVLREMKAIGIEPSLATYHHIIRLFDQPGDPLKRSSFIIYDIMNELMGKRFSPKDPDDDKFFQSAMSICSSLRDLELAYQVHGLLKTGDNWKFIGPDQHRNFYYSKFFDLICLMEQIDVTLKWYEDLIPSAYFPHSQTMIHLLQALDVANRLEVIPKIWKDSKEYGHTFRSDLREEILMLMARDKHPPELQVAFADCAADIKSAYESQPIRQTAQDWPATSLNCIAILFLRAGRTQEAWKMLGLFRKHNKIPRSELLNELMDSAKVSNSPSQAIEVVELASAFSLPICEGLTQRVMSDFAINQEQKEALSNLTALTSDSDTDSSSDSDSDTSEGK

Annotated regions:
phrase: NEHSYCTMIRGMVKHRAYEQALNLYTELLNNRLH
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: AVLQALASTVNRDTTAVPYVFQDDPYLMPASSLESRSFLLAKKSGENVAKFIINSYPKYFQKDIAEPHIPCLMPEYFEPQIKDISEAALKERIELRKVKASVDMFDQLLQAGTTVSLETTNSLLDLLCYYGDQEPSTDYHFQQTGQSEALEEENDETSRRKAGHQFGVTWRAKNNAERIFSLMPEKNEHSYCTMIRGMVKH
type: REPEAT
name: Rib_mS39_PPR
description: Small ribosomal subunit protein mS39, PPR

phrase: LLNNRLHADVYTFNALIEATVCAINEKFEEKWSKILELLRHMVAQKVKPNLQTFNTILK
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: ALQVLREMKAIGIEPSLATYHHIIRL
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: NLQTFNTILKCLRRFHVFARSPALQVLREMKAIGIE
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat
Protein sequence:
MESTRTEAIVLAAMDYRESDRIVTLFTLQYGKVRGVAKGAKRSARRFGPALEPFARIGVELVVREGLSSLRGADIVTLYPGIRRDLRAIGLAGYAVELVDRYLPDGAPSPRLFRLLSSYLERLDQGEPLPSDRRFFEANFLNILGYRISLDHCASCGVELPATAERRTGASGMILCANCGRYGASVGPEAAALLGRCIATGRFGAVLFSPQSLREAGTLLDGAIAAHLTRPLNSLAFLKQIEPD

Annotated regions:
phrase: MESTRTEAIVLAAMDYRESDRIVTLFTLQYGKVRGVAKGAKRSARRFGPALEPFARIGVELVVREGLSSLRGADIVT
type: DOMAIN
name: DNA_rep/recomb_RecO_N
description: DNA replication/recombination mediator RecO, N-terminal
Protein sequence:
MYAIVRSGGRQHKVAVGDIVEVDKISTGKVGDTVELSTLLVVDGDAVTSDPWVLAGIKVQAEIVDHHKGQKIDILRYKNKTGYRRRQGHRQQYTAIKVTEIPAAAK

Annotated regions:
phrase: IDILRYKNKTGYRRRQGHRQQY
type: CONSERVED_SITE
name: Ribosomal_bL21_CS
description: Large ribosomal subunit protein bL21, conserved site
Protein sequence:
MITVNVDLGDRAYPIHIGAGLIGRTELFAPHIKGSSVTIVTNTTVDPLYGDALRAALAPLGKRVSTVVLPDGEAYKNWETLNLIFDGLLTDHADRKTTLVALGGGVVGDMTGFAAACYMRGVPFIQVPTTLLSQVDSSVGGKTGINHPLGKNMIGAFYQPQAVIADIGALTTLPDRELAAGVAEVIKTGAIADAGFFDWIEANVEALNRREPAALAHAVKRSCEIKASVVAADEREGGLRAILNFGHTFGHAIEAGLGYGEWLHGEAVGCGMVMAGDLSVRLGLLDEASRQRLDAVIAAAHLPTRGPALGDARYMDLMRVDKKAEAGAIKFILLKRFGDTLITQAPDEAVFATLAQTTR

Annotated regions:
phrase: VVLPDGEAYKNWETLNLIFDGLLTDHADRKTTLVALGGGVVGDMTGFAAACYMRGVPFIQVPTTLLSQVDSSVGGKTGINHPLGKNMIGAFYQPQAVIADIGALTTLPDREL
type: DOMAIN
name: DHQS/DOIS_N
description: 3-dehydroquinate synthase, N-terminal domain

phrase: GVAEVIKTGAIADAGFFDWIEANVEALNRREPAALAHAVKRSCEIKASVVAADEREGGLRAILNFGHTFGHAIEAGLGYGEWLHGEAVGCGMVMAGDLSVRLGLLDEASRQRLDAVIAAAHLPTRGPALGDARYMDLMRVDKK
type: DOMAIN
name: DHQS_C
description: 3-dehydroquinate synthase, C-terminal domain
Protein sequence:
MSRVFAYCRVSTLEQTTENQRREIEAAGFAIRPQRLIEEHISGSVAASERPGFIRLLDRMENGDVLIVTKLDRLGRNAMDIRKTVEQLASSDIRVHCLALGGVDLTSAAGRMTMQVISAVAEFERDLLLERTHSGIARAKATGKRFGRPSALNEEQQLTVIARINAGISISAIAREFNTTRQTILRVKAGQQSS

Annotated regions:
phrase: YCRVSTLE
type: CONSERVED_SITE
name: Recombinase_CS
description: Recombinase, conserved site

phrase: GDVLIVTKLDRL
type: CONSERVED_SITE
name: Recombinase_CS
description: Recombinase, conserved site

phrase: VFAYCRVSTLEQTTENQRREIEAAGFAIRPQRLIEEHISGSVAASERPGFIRLLDRMENGDVLIVTKLDRLGRNAMDIRKTVEQLASSDIRVHCLALGGVDLTSAAGRMTMQVISAVAEFERDLLLERTHSGIARAKATG
type: DOMAIN
name: Resolv_N
description: Resolvase, N-terminal catalytic domain

phrase: GRPSALNEEQQLTVIARINAGISISAIAREFNTTRQTILRVKA
type: DOMAIN
name: Resolvase_HTH_dom
description: Resolvase, HTH domain

phrase: RVFAYCRVSTLEQTTENQRREIEAAGFAIRPQRLIEEHISGSVAASERPGFIRLLDRMENGDVLIVTKLDRLGRNAMDIRKTVEQLASSDIRVHCLALGGVDLTSAAGRMTMQVISAVAEFERDLLLERTHSGIARAKAT
type: DOMAIN
name: Resolv_N
description: Resolvase, N-terminal catalytic domain

phrase: VFAYCRVSTLEQTTENQRREIEAAGFAIRPQRLIEEHISGSVAASERPGFIRLLDRMENGDVLIVTKLDRLGRNAMDIRKTVEQLASSDIRVHCLALGGVDLTSAAGRMTMQVISAVAEFERDLLLERTHSGIARAKATGK
type: DOMAIN
name: Resolv_N
description: Resolvase, N-terminal catalytic domain
Protein sequence:
MSNANQKENVPSLGLPRTHGTLNVNALKATDILKHKGKLNEVNSDQSTTNENDEVQEEAVFLDDPVHFTRVSSSSELSAALSVNTTEQEQDEEKGTEHAELEPAEEDTVEVDTIRNNGDKTYSTIRESASDFETTNNTLIEISKNSSTYSSTEFLNNNNNGISNSNRATIDSESKLRMNKLREGSSTSLSNDSNGFNGMISSNQASTVLSTPSQKPSSTTNTITKANNGGSTRAQKEKHTSPKLPSTVTAPSSHRKSADLSKTNKLPSTTAKRTPKQAVTSSSPKEPAKRKSSTSKMKGMFSSLVQNMKRNSSDNRKSASSLSSVSSSSSSTLKISTPYNPKHIYHVGVDARTGEYTGLPEEWERLLASSGISRKEQQQNMQAVIDIVNFYQDVADHTGEEKVIKTFDPKKQNPLVRDSLSKYEQVDDNRTSYASGGTPTLEQNGFHTSSTPRSRTSLTSPTAGYSMISTPPMATQEKYIPTRPAPKPPGQQTPSSNASLTPKMQNATMSPIKENISSPVTKSEVDDELLLSKKNASLPKLPSDDSSSHKKSATDSAPTSVETDTETVKVPPIPKTTPTVPAKASRRSNEKKKEERERNKKLLYAKLTEICSPGDPKSKYRDLIKIGQGASGGVYIAHDTESEDSVAIKQMNLEKQPKKELILNEILVMRESKHSNIVNFIDSYLAKGDLWIVMEYMEGGSLTDVVTHCLLSEGQIGAVCRETLKGLQFLHSKGVLHRDIKSDNILLSLKGNIKLTDFGFCAQINENNLKRTTMVGTPYWMAPEVVSRKEYGPKVDIWSLGIMIIEMIEGEPPYLNETPLRALYLIATNGTPKLKEPEALSDTLTKFLDWCLKVDPSERATATELLDDPFITEIAEDNSSLSPLVKLARIKKLEEQEEDAGTDETEPETTPDTTI

Annotated regions:
phrase: ISTPYNPKHIYHV
type: DOMAIN
name: CRIB_dom
description: CRIB domain

phrase: YRDLIKIGQGASGGVYIAHDTESEDSVAIKQMNLEKQPKKELILNEILVMRESKHSNIVNFIDSYLAKGDLWIVMEYMEGGSLTDVVTHCLLSEGQIGAVCRETLKGLQFLHSKGVLHRDIKSDNILLSLKGNIKLTDFGFCAQINENNLKRTTMVGTPYWMAPEVVSRKEYGPKVDIWSLGIMIIEMIEGEPPYLNETPLRALYLIATNGTPKLKEPEALSDTLTKFLDWCLKVDPSERATATELLDDPF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: KISTPYNPKHIYHVGVDARTGEYTGLPEEWERLLASSGISRKEQQQNMQAVIDIVNFY
type: DOMAIN
name: CRIB_dom
description: CRIB domain

phrase: LKISTPYNPKHIYHVGVDARTGEYTGLPEEWERLLASSGISRKEQ
type: DOMAIN
name: PAK_BD
description: p21 activated kinase binding domain

phrase: ISTPYNPKHIYHVGVDARTGEYTGLPEEWERLLAS
type: DOMAIN
name: CRIB_dom
description: CRIB domain

phrase: VLHRDIKSDNIL
type: ACTIVE_SITE
name: Ser/Thr_kinase_AS
description: Serine/threonine-protein kinase, active site

phrase: YRDLIKIGQGASGGVYIAHDTESEDSVAIKQMNLEKQPKKELILNEILVMRESKHSNIVNFIDSYLAKGDLWIVMEYMEGGSLTDVVTHCLLSEGQIGAVCRETLKGLQFLHSKGVLHRDIKSDNILLSLKGNIKLTDFGFCAQINENNLKRTTMVGTPYWMAPEVVSRKEYGPKVDIWSLGIMIIEMIEGEPPYLNETPLRALYLIATNGTPKLKEPEALSDTLTKFLDWCLKVDPSERATATELLDDPF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: RDLIKIGQGASGGVYIAHDTESEDSVAIKQMNLEKQPKKELILNEILVMRESKHSNIVNFIDSYLAKGDLWIVMEYMEGGSLTDVVTHCLLSEGQIGAVCRETLKGLQFLHSKGVLHRDIKSDNILLSLKGNIKLTDFGFCAQINENNLKRTTMVGTPYWMAPEVVSRKEYGPKVDIWSLGIMIIEMIEGEPPYLNETPLRALYLIATNGTPKLKEPEALSDTLTKFLDWCLKVDPSERATATELLDDPF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: IGQGASGGVYIAHDTESEDSVAI
type: BINDING_SITE
name: Protein_kinase_ATP_BS
description: Protein kinase, ATP binding site
Protein sequence:
MDVRFYPAAAGDPAGLDFAQCLGYYGYSKLGNNNYMNMAEANNAFFAASEQTFHTPSLGDEEFEIPPITPPPESDPTLGMPDALLPFQTLSDPLPSQGTEFTPQFPPQSLDLPSITISRNLVEQDGVLHSNGLHMDQSHTQVSQYRQDPSLVMRSIVHMTDGARSGIMPPAQLTTINQSQLSAQLGLNLGGANVSHTSPSPPASKSATPSPSSSINEEDADDANRAIGEKRTAPDSGKKPKTPKKKKKKDPNEPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYRASLVSKAAAESAEAQTIRSVQQTLASTNLTSSLLLNTSLSQHGTVPASPQTLPQSLPRSIAPKPLTMRLPMSQIVTSVTIAANMPSNIGAPLISSMGTTMVGSATSTQVSPSVQTQQHQMQLQQQQQQQQQMQQMQQQQLQQHQMHQQIQQQMQQQHFQHHMQQHLQQQQQQHLQQQLSQQQLQQQLQQHLQLQQLQHMQHQSQPSPRQHSPVTSQITSPIPAIGSPQPASQQHQPQIQSQTQTQVLPQVSIF

Annotated regions:
phrase: PQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAY
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain

phrase: EPQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAYR
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain

phrase: PQKPVSAYALFFRDTQAAIKGQNPNATFGEVSKIVASMWDSLGEEQKQVYKRKTEAAKKEYLKALAAY
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain
Protein sequence:
MPGKPKHLGVPNGRMVLAVSDGELTSTSGSQAQGEGRGSSLSIHSLPSGPSSPFSTDEQPVASWAQSFERLLQDPRGLAYFTEFLKKEFSAENVTFWQACERFQQIPASDTKQLAQEAHNIYHEFLSSQALSPVNIDRQAWLSEEVLAQPRPDMFRAQQLQIFNLMKFDSYARFVKSPLYQECLLAEAEGRPLREPGSSHLGSPDTARKKPKLKPGKSLPLGVEELGQLPLAEGRPLRKSFRREMPGGAVNSALRRESQGSLNSSASLDLGFLAFVSSKSESHRKSLGSGEGESESRPGKYCCVYLPDGTASLALARPGLTIRDMLAGICEKRGLSLPDIKVYLVGKEQKALVLDQDCTVLADQEVRLENRITFQLELVGLERVVRISAKPTKRLQEALQPILAKHGLSLDQVVLHRPGEKQLVDLENLVSSVASQTLVLDTLPDAKTREASSIPPCRSQGCLPRTQTKDSHLPPLSSSLSVEDASGSTGKRQTCDIEGLVELLNRVQSSGAHDQRGLLRKEDLVLPEFLQLPSQRPGSQEAPP

Annotated regions:
phrase: YCCVYLPDGTASLALARPGLTIRDMLAGICEKRGLSLPDIKVYLVGKEQKALVLDQDCTVLADQEVRL
type: DOMAIN
name: RBD_dom
description: Raf-like Ras-binding

phrase: SFERLLQDPRGLAYFTEFLKKEFSAENVTFWQACERFQQIPASDTKQLAQEAHNIYHEFLSSQALSPVNIDRQAWLSEEVLAQPRPDMFRAQQLQIFNLMKFDSYARFVKSPLYQEC
type: DOMAIN
name: RGS
description: RGS domain

phrase: SFERLLQDPRGLAYFTEFLKKEFSAENVTFWQACERFQQIPASDTKQLAQEAHNIYHEFLSSQALSPVNIDRQAWLSEEVLAQPRPDMFRAQQLQIFNLMKFDSYARFVKSPLYQ
type: DOMAIN
name: RGS
description: RGS domain

phrase: TFQLELVGLERVVRISAKPTKRLQEALQPILAKHGLSLDQVVLHRPGEKQLVDLENLVSSVASQTLVLDT
type: DOMAIN
name: RBD_dom
description: Raf-like Ras-binding

phrase: KYCCVYLPDGTASLALARPGLTIRDMLAGICEKRGLSLPDIKVYLVGKEQKALVLDQDCTVLADQEVRLEN
type: DOMAIN
name: RBD_dom
description: Raf-like Ras-binding

phrase: SFERLLQDPRGLAYFTEFLKKEFSAENVTFWQACERFQQIPASDTKQLAQEAHNIYHEFLSSQALSPVNIDRQAWLSEEVLAQPRPDMFRAQQLQIFNLMKFDSYARFVKSPLYQEC
type: DOMAIN
name: RGS
description: RGS domain

phrase: IEGLVELLNRVQSSGAHDQRGL
type: CONSERVED_SITE
name: GoLoco_motif
description: GoLoco motif

phrase: KYCCVYLPDGTASLALARPGLTIRDMLAGICEKRGLSLPDIKVYLVGKEQKALVLDQDCTVLADQEVRLE
type: DOMAIN
name: RBD1_RGS14
description: Regulator of G-protein signaling 14, Ras-binding domain 1

phrase: IEGLVELLNRVQSSGAHDQRGL
type: CONSERVED_SITE
name: GoLoco_motif
description: GoLoco motif

phrase: EGLVELLNRVQSSGAHDQRGL
type: CONSERVED_SITE
name: GoLoco_motif
description: GoLoco motif

phrase: RITFQLELVGLERVVRISAKPTKRLQEALQPILAKHGLSLDQVVLHRPGEKQLVDLENLVSSVASQTLVLD
type: DOMAIN
name: RBD2_RGS14
description: Regulator of G protein signaling 14, Ras-binding domain 2

phrase: KYCCVYLPDGTASLALARPGLTIRDMLAGICEKRGLSLPDIKVYLVGKEQKALVLDQDCTVLADQEVRLEN
type: DOMAIN
name: RBD_dom
description: Raf-like Ras-binding

phrase: TFQLELVGLERVVRISAKPTKRLQEALQPILAKHGLSLDQVVLHRPGEKQLVDLENLVSSVASQTLVLDT
type: DOMAIN
name: RBD_dom
description: Raf-like Ras-binding

phrase: WAQSFERLLQDPRGLAYFTEF
type: DOMAIN
name: RGS
description: RGS domain

phrase: KKEFSAENVTFWQACERF
type: DOMAIN
name: RGS
description: RGS domain

phrase: EAHNIYHEFLSSQALSPVNIDRQ
type: DOMAIN
name: RGS
description: RGS domain

phrase: QQLQIFNLMKFDSYARFVK
type: DOMAIN
name: RGS
description: RGS domain

phrase: EQPVASWAQSFERLLQDPRGLAYFTEFLKKEFSAENVTFWQACERFQQIPASDTKQLAQEAHNIYHEFLSSQALSPVNIDRQAWLSEEVLAQPRPDMFRAQQLQIFNLMKFDSYARFVKSPLYQECLL
type: DOMAIN
name: RGS14_RGS
description: RGS14, RGS domain
Protein sequence:
MEDERSFSDICGGRLALQRRYYSPSCREFCLSCPRLSLRSLTAVTCTVWLAAYGLFTLCENSMILSAAIFITLLGLLGYLHFVKIDQETLLIIDSLGIQMTSSYASGKESTTFIEMGKVKDIVINEAIYMQKVIYYLCILLKDPVEPHGISQVVPVFQSAKPRLDCLIEVYRSCQEILAHQKATSTSP

Annotated regions:
phrase: TLLIIDSLGIQMTSSYASGKESTTFIEMGKVKDIVINEAIYMQKVIYYLCILLKDPVEPHGISQVVPVF
type: DOMAIN
name: GPI-GlcNAc_Trfase_PIG-H_dom
description: GPI-GlcNAc transferase complex, PIG-H component, conserved domain
Protein sequence:
MRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQHDTSLPHCRFYEEFDAHGREVPLPAGIYNLDDLKALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQGNLETLQKTVLRWGRGQLEDPGACPGLCLTCPQGCQPHPNPSYLPAGSKRQTSSACGMSTGVWWRGCGRPAPPGRRTPTWPTRCCPTRVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAERLRSLLHTLEITDLADFSPLTLLANFATLVSTYAKGFTIIIEPFDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYFLRQMAQPFHREDQLGLSLLSLEQLESEETLQRIEQIA

Annotated regions:
phrase: YQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFA
type: DOMAIN
name: ATP-dep_Helicase_C
description: ATP-dependent helicase, C-terminal

phrase: MRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQHDTSLPHCRFYEEFDAHGREVPLPAGIYNLDDLKALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQGNLETLQKTVLRWGRGQLEDPG
type: DOMAIN
name: Helic_SF1/SF2_ATP-bd_DinG/Rad3
description: Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type

phrase: YCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQHDTSLPHCRFYEEFDAHGREVPLPAGIYNLDDLKALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRT
type: DOMAIN
name: RAD3-like_helicase_DEAD
description: RAD3-like helicase, DEAD

phrase: AVVVFDEAH
type: CONSERVED_SITE
name: DNA/RNA_helicase_DEAH_CS
description: DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site

phrase: CPTRVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAERLRSLLHTLEITDLADFSPLTLLANFATLVSTYAK
type: DOMAIN
name: HBB
description: Helical and beta-bridge domain

phrase: LEMSAVVPDGIVAFFTSYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVARGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMVFADKRFARGDKRGKLPRWIQ
type: DOMAIN
name: ATP-dep_Helicase_C
description: ATP-dependent helicase, C-terminal

phrase: MRELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQHDTSLPHCRFYEEFDAHGREVPLPAGIYNLDDLKALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNLTRRTLDRCQGNLETLQKTVLRWG
type: DOMAIN
name: Helicase-like_DEXD_c2
description: Helicase-like, DEXD box c2 type
Protein sequence:
MTSATPRILLIVGGGIAAYKSLELIRLIKKGGMEVRVVLTQAAQQFVTPLSAGALSGDKVYTDLFDLKDEAEMGHITLSRQADLVVVAPATANLMSKLAAGQTDDLATTLLLATDKPVLMAPAMNVRMWHHPATQRNLSTLQSDGVLFVGPDEGDMACGEFGLGRMSEPEAIFTAIQGALKPKTQPLKGRHILITAGPTFEPLDPVRGITNRSSGKQGYAIAAAAAQAGAKVTLISGPVSLATPDGVTRIDVETAQQMFEAVHAHLPADVFIGVAAVGDWRAKDIARDKQKKGVNDELSVTLVKNPDILASVGKHETQRPKLVIGFAAETRNVEVYGQTKLRTKGADAIMANDVSKDVFDADTTNMILIDASGPTSGRNMTKAEAAADLIHYIAAKLT

Annotated regions:
phrase: LKGRHILITAGPTFEPLDPVRGITNRSSGKQGYAIAAAAAQAGAKVTLISGPVSLATPDGVTRIDVETAQQMFEAVHAHLPADVFIGVAAVGDWRAKDIARDKQKKGVNDELSVTLVKNPDILASVGKHETQRPKLVIGFAAETRNVEVYGQTKLRTKGADAIMANDVSKDVFDADTTNMIL
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal

phrase: RILLIVGGGIAAYKSLELIRLIKKGGMEVRVVLTQAAQQFVTPLSAGALSGDKVYTDLFDLKDEAEMGHITLSRQADLVVVAPATANLMSKLAAGQTDDLATTLLLATDKPVLMAPAMNVRMWHHPATQRNLSTLQSDGVLFVGPDEGDMACGEFGLGRMSEPEAIFTAI
type: DOMAIN
name: Flavoprotein
description: Flavoprotein
Protein sequence:
MKKYRDHYFLKAKQENYPARSVYKLKEIDNRFKIFRQGMKVLDLGAAPGSWSLGAAEKVGPRGRVLACDLQETDTVFPDNVTFMQENVFERSEAFENLLDEIAPFDVVISDMAPRTTGTRFTDQARSLELCLEALAVADRCLIKGGSFVVKIFMGPDVQELVQAMRQRFSAVKSFKPKSSRAESKETFYVCLGYRGVETSDTDK

Annotated regions:
phrase: YPARSVYKLKEIDNRFKIFRQGMKVLDLGAAPGSWSLGAAEKVGPRGRVLACDLQETDTVFPDNVTFMQENVFERSEAFENLLDEIAPFDVVISDMAPRTTGTRFTDQARSLELCLEALAVADRCLIKGGSFVVKIFMGPDVQELVQAMRQRFSAVKSFKPKSSRAESKETFYVCLG
type: DOMAIN
name: RNA_MeTrfase_FtsJ_dom
description: Ribosomal RNA methyltransferase, FtsJ domain
Protein sequence:
MQIYQFGKIVSKNKNYLILENHGSGYLIYVPRIDRFSRDENRKIYIYEHENDYTKITYGFASFRERILFEDLISIQGVGPKTAISALNSGMQNLINLIAANDWKTLAKIPYLSEKNAKQIVFEFQKKYERFNENHKNQTEETNQDSQEKELEKKDDLADITIQKSNLEDKTAANLEDTLKMLGFKPRQIDYALTKVEPNENFENLIENAIKIISNAREFRN

Annotated regions:
phrase: EDTLKMLGFKPRQIDYALTKVEPNENFENLIENAIKII
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal

phrase: YQFGKIVSKNKNYLILENHGSGYLIYVPRIDRFSRDENRKIYIYEHENDYTKITY
type: DOMAIN
name: DNA_helicase_Holl-junc_RuvA_I
description: DNA helicase, Holliday junction RuvA type, domain I, bacterial
Protein sequence:
MDGESQTSKLSCEHMYSWYFTREELEKFSPSRKDGITEIMESEIRQLYCSFIRDVGIRLKLPQMTIATAIMFCHRFYLYQSLAKNGWQTIATVCIFLASKVEDTPCPLDQVIRVAYGTMYRRDPATARRIHQKDVFEKQKALILTGERLVLTTVRFDFNIQHPYRPLLDAMEKLGISQKEVKQVAWNFVNDWLKTTLCLQYKPQYIAAGSLYLAAKFQNVKLPVHGGHVWWHQFDVAPKPLEAVLQQMREMVHMKAKLFAHPSPAKQKEVLFEGMLLISNSPDSVLTQSSLSVSSSSPEIGDPNDHLQVDSSQDIVHIEDRSKSYPERNLSNLTADMNNPGKTHNKESLDQALKIKHGGLISCNQQIPLDAIAKIDSSTAKCVEQNIGICCSSSNTFNGKILNPFSISQRSGDKTKLCSEGGSSLTDVDSKSTQSVEPPTTICNHTSDSLNVDSLCSDQRLANSTAGTTEKASFVLPVQIKVDHLCVERKKVDVARIKDLLMKRKRRRERQGRCIPSVDLSEEAWIERELESGIVFKKVDHVVASYDLSDEGWIERELESGIVIGQKNDQPVSLDGLTEDDWIERELESGIIVEPGPAGKKLKSKLLSEGHEIMNSRWEINGKSMQNQVT

Annotated regions:
phrase: SFIRDVGIRLKLPQMTIATAIMFCHRFYLYQSLAKNGWQTIATVCIFLASKVEDTPCPLDQVIRVAYGTMYRRDPATARRIHQKDVFEKQKALILTGERLVL
type: DOMAIN
name: Cyclin-like_dom
description: Cyclin-like domain

phrase: RPLLDAMEKLGISQKEVKQVAWNFVNDWLKTTLCLQYKPQYIAAGSLYLAAKFQNVKLPVHGGHVWWHQFDVAPKPLEAVLQQMREMV
type: DOMAIN
name: Cyclin-like_dom
description: Cyclin-like domain

phrase: YFTREELEKFSPSRKDGITEIMESEIRQLYCSFIRDVGIRLKLPQMTIATAIMFCHRFYLYQSLAKNGWQTIATVCIFLASKVEDTPCPLDQVIRVAYGTMYRRDPATARRIHQKDVFEKQKALILTGERLVLTTVRFD
type: DOMAIN
name: Cyclin_N
description: Cyclin, N-terminal
Protein sequence:
MKHIVSIDQCSAEDILRILDRAELFEKNPNRHLLEGKVVATLFFEPSTRTRLSFETAVNRLGGRIIGFSDASTSSSTKGESLKDTISMVGNYADLIIMRHYLEGAARYASEVSRVPVVNAGDGANQHPSQTLLDLYSIRKTQGTLYDRTIAMVGDLKYGRTIHSLIEGMSHFRPRFIFVAPEELSLPEEYKQFCREHDLPYTETKHFDEEVINNCDILYMTRVQRERFTDLEEYERVKDVYVLTNAMLSDSRPNLRVLHPLPRVGEIAYDVDDNPKAYFIRQALNGLYTRQSIICEVLGIDVAN

Annotated regions:
phrase: RTIAMVGDLKYGRTIHSLIEGMSHFRPRFIFVAPEELSLPEEYKQFCREHDLPYTETKHFDEEVINNCDILYMTRVQRERFTDLEEYERVKDVYVLTNAMLSDSRPNLRVLHPLPRVGEIAYDVDDNPKAYFIRQALNGLYTRQSII
type: DOMAIN
name: Asp_carbamoyltransf_Asp/Orn-bd
description: Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain

phrase: KHIVSIDQCSAEDILRILDRAELFEKNPNRHLLEGKVVATLFFEPSTRTRLSFETAVNRLGGRIIGFSDASTSSSTKGESLKDTISMVGNYADLIIMRHYLEGAARYASEVSRVPVVNAGDGANQHPSQTLLDLYSI
type: DOMAIN
name: Asp/Orn_carbamoyltranf_P-bd
description: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding
Protein sequence:
MTKYIFVTGGVVSGLGKGITAASLGRLLKARGYKVTAQKLDPYINIDPGTMSPYQHGEVFVTEDGAETDLDLGHYERFIDENLNRYSNLTTGKVYWNVLNKERNGEYLGQTVQVIPHITNEIKSFIYNVGAHSGADVAITEIGGTTGDIESQPFIEAIRQISMEIGRENCCFIHVTLVPYIAGSCEFKSKPTQHSVRELQGMGIRPDVIVARVDEPLPEEIREKIAMFCNVGRDCVVENRTLPLLYEAPVMLEKEKLASTVCRILGLADREPDLSDWHRMLGQAASRARSVKIALCGKYVRLHDAYLSVAEALTHAGFENGARVEILWTDTEKLTEENAEKVLREADGILVPGGFGNRGVEGKLVAAKYAREKDIPFLGICLGMQIAVIEFARNVVGWADAASSEFAKNSSHPVIDLMPDQHGVKMGGTMRLGAYPCAVQNGTLLENLYGASLISERHRHRYEFNNEYREELQEKGLCISGVSPDGKLVEAVELPEKRFYVGVQFHPEFKSRPNAPHPLFAGFIRAALKNS

Annotated regions:
phrase: HDAYLSVAEALTHAGFENGARVEILWTDTEKLTEENAEKVLREADGILVPGGFGNRGVEGKLVAAKYAREKDIPFLGICLGMQIAVIEFARNVVGWADAASSEFAKNSSHPVIDLMPDQHGVKMGGTMRLGAYPCAVQNGTLLENLYGASLISERHRHRYEFNNEYREELQEKGLCISGVSPDGKLVEAVELPEKRFYVGVQFHPEFKSRPNAPHPLFAGFI
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: KYIFVTGGVVSGLGKGITAASLGRLLKARGYKVTAQKLDPYINIDPGTMSPYQHGEVFVTEDGAETDLDLGHYERFIDENLNRYSNLTTGKVYWNVLNKERNGEYLGQTVQVIPHITNEIKSFIYNVGAHSGADVAITEIGGTTGDIESQPFIEAIRQISMEIGRENCCFIHVTLVPYIAGSCEFKSKPTQHSVRELQGMGIRPDVIVARVDEPLPEEIREKIAMFCNVGRDCVVENRTLPLLYEAPVMLEKEKLASTVCRILG
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: VKIALCGKYVRLHDAYLSVAEALTHAGFENGARVEILWTDTEKLTEENAEKVLREADGILVPGGFGNRGVEGKLVAAKYAREKDIPFLGICLGMQIAVIEFARNVVGWADAASSEFAKNSSHPVIDLMPDQHGVKMGGTMRLGAYPCAVQNGTLLENLYGASLISERHRHRYEFNNEYREELQEKGLCISGVSPDGKLVEAVELPEKRFYVGVQFHPEFKSRPNAPHPLFAGF
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain

phrase: KYIFVTGGVVSGLGKGITAASLGRLLKARGYKVTAQKLDPYINIDPGTMSPYQHGEVFVTEDGAETDLDLGHYERFIDENLNRYSNLTTGKVYWNVLNKERNGEYLGQTVQVIPHITNEIKSFIYNVGAHSGADVAITEIGGTTGDIESQPFIEAIRQISMEIGRENCCFIHVTLVPYIAGSCEFKSKPTQHSVRELQGMGIRPDVIVARVDEPLPEEIREKIAMFCNVGRDCVVENRTLPLLYEAPVMLEKEKLASTVC
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal
Protein sequence:
MFLYVAVGSLVVARLLLYPLRPADLTPPYWVAMGATAITVLAGAHIVEMADAPMAIVTSGLVAGASVVFWAFGPWLIPPLVAASIWKHVVHRVPLRYEATLWSVVFPLGMYGVGAYRLGLAAHLPIVESIGEFEGWVALAVWTITFVAMLHHLAATIGRSGRSSHAIGAADDTHAIICRPPRSFDHQVRAFRRNQPM

Annotated regions:
Protein sequence:
MANIDNKEQTELDQQDMEDVEDVEEEETGEEANSKARQLTAQMMQNPQVLAALQERLDDLVGTPTGYIESLPKVVKRRVNALKNLQVKCAQIEAKFYEEVHELERKYAALYQPFFEKRSDIINASYEPTEEECEWKVDEEEDIAEDLKEKAKLEEEKKDEEKEDPKGIPEFWLTVFKNVDLLSDMVQEHDEPILKHLKDIKVKFSEAGQPMNFMLEFHFEPNEFFTNELLTKTYKMRSEPDESDPFSFDGPEIMGCTGCLIDWKKGKNVTLKTIKKKQKHKGRGTVRTVTKTVPNDSFFNFFSPPEVPENGELDDDAEAILTADFEIGHFLRERIIPRSVLYFTGEAIEDDDDDYDEEGEEADDEEGEEEADEDHDPDFDPKKAQNPAECKQQ

Annotated regions:
Protein sequence:
MAAMAPGGSGSGGGVNPFLSDSDEDDDEVAATEERRAVLRLGAGSGLDPGSAGSLSPQDPVALGSSARPGLPGEASAAAVALGGTGETPARLSIDAIAAQLLRDQYLLTALELHTELLESGRELPRLRDYFSNPGNFERQSGTPPGMGAPGVPGAAGVGGAGGREPSTASGGGQLNRAGSISTLDSLDFARYSDDGNRETDEKVAVLEFELRKAKETIQALRANLTKAAEHEVPLQERKNYKSSPEIQEPIKPLEKRALNFLVNEFLLKNNYKLTSITFSDENDDQDFELWDDVGLNIPKPPDLLQLYRDFGNHQVTGKDLVDVASGVEEDELEALTPIISNLPPTLETPQPAENSMLVQKLEDKISLLNSEKWSLMEQIRRLKSEMDFLKNEHFAIPAVCDSVQPPLDQLPHKDSEDSGQHPDVNSSDKGKNTDIHLSISDEADSTIPKENSPNSFPRREREGMPPSSLSSKKTVHFDKPNRKLSPAFHQALLSFCRMSADSRLGYEVSRIADSEKSVMLMLGRCLPHIVPNVLLAKREELIPLILCTACLHPEPKERDQLLHILFNLIKRPDDEQRQMILTGCVAFARHVGPTRVEAELLPQCWEQINHKYPERRLLVAESCGALAPYLPKEIRSSLVLSMLQQMLMEDKADLVREAVIKSLGIIMGYIDDPDKYHQGFELLLSALGDPSERVVSATHQVFLPAYAAWTTELGNLQSHLILTLLNKIEKLLREGEHGLDEHKLHMYLSALQSLIPSLFALVLQNAPFSSKAKLHGEVPQIEVTRFPRPMSPLQDVSTIIGSREQLAVLLQLYDYQLEQEGTTGWESLLWVVNQLLPQLIEIVGKINVTSTACVHEFSRFFWRLCRTFGKIFTNTKVKPQFQEILRLSEENIDSSAGNGVLTKATVPIYATGVLTCYIQEEDRKLLVGFLEDVMTLLSLSHAPLDSLKASFVELGANPAYHELLLTVLWYGVVHTSALVRCTAARMFELTLRGMSEALVDKRVAPALVTLSSDPEFSVRIATIPAFGTIMETVIQRELLERVKMQLASFLEDPQYQDQHSLHTEIIKTFGRVGPNAEPRFRDEFVIPHLHKLALVNNLQIVDSKRLDIATHLFEAYSALSCCFISEDLMVNHFLPGLRCLRTDMEHLSPEHEVILSSMIKECEQKVENKTVQEPQGSMSIAASLVSEDTKTKFLNKMGQLTTSGAMLANVFQRKK

Annotated regions:
phrase: EKRALNFLVNEFLLKNNYKLTSITFSDENDDQ
type: CONSERVED_SITE
name: LisH
description: LIS1 homology motif

phrase: EKRALNFLVNEFLLKNNYKLTSITFSDENDDQ
type: CONSERVED_SITE
name: LisH
description: LIS1 homology motif

phrase: VAPALVTLSSDPEFSVRIATIPAFGTIMETVIQRELLE
type: REPEAT
name: HEAT_type_2
description: HEAT, type 2
Protein sequence:
MIIHPKVRGFICTTTHPLGCERNVLDQIAATRARGVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGSDKKAGTAGWYNSAAFDTHAKAAGLYSKSINGDAFSDEARAKVIELIKTDMGGQVDLVVYSLASPVRKLPSTGEVKRSALKPIGNTYTATAIDTNKDTIIQASIEPATEQEIEDTITVMGGQDWELWIDALDSAGVLAKGARSVAFSYIGTEITWPIYWHGALGKAKVDLDHTAQRLDARLQASGGGANVAVLKSVVTQASAAIPVMPLYISMVYKIMKEKGLHEGTIEQLDRLFRERLYREDGQPAEVDEQNRLRLDDWELRDDVQDACKALWPQVTTENLFALTDYAGYKHEFLKLFGFERKDVDYDADVDPDVKFDCIELG

Annotated regions:
phrase: KAGTAGWYNSAAFDTHAKAAGLYSKSINGDAFSDEARAKVIELIKTDMGGQVDLVVYSLASPVRKLPSTGEVKRSALKPIGNTYTATAIDTNKDTIIQASIEPATEQEIEDTITVMGGQDWELWIDALDSAGVLAKGARSVAFSYIGTEITWPIYWHGALGKAKVDLDHTAQRLDARLQASGGGANVAVLKSVVTQASAAIPVMPLYISMVYKIMKEKGLHEGTIEQLDRLFRERL
type: DOMAIN
name: Enoyl-CoA_Rdtase_cat_dom
description: Trans-2-enoyl-CoA reductase catalytic domain, putative

phrase: IIHPKVRGFICTTTHPLGCERNVLDQIAATRARGVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPG
type: DOMAIN
name: FabV-like_NADH_b
description: Trans-2-enoyl-CoA reductase-like, NAD(P)H binding domain

phrase: VDEQNRLRLDDWELRDDVQDACKALWPQVTTENLFALTDYAGYKHEFLKLFGFERKDVDYDAD
type: DOMAIN
name: Eno_Rdtase_FAD-bd_dom
description: Enoyl reductase FAD binding domain