nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MGGKDIDRLIEERRKQQNIEEILPELQLEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKNVIRVPIVDGTVPHDVIGTFGATKIIVLPARRGTGVVAGGAAKPVFELAGYTDVLTKIIGSTNPDNVVRAVFDALLQLKTPEQIAEERGLPVEEILRRYRRYALPKMNIKHYYPWRGIYEQT

Annotated regions:
phrase: LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKNVIRV
type: DOMAIN
name: Ribosomal_uS5_N
description: Small ribosomal subunit protein uS5, N-terminal

phrase: LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKNVIR
type: DOMAIN
name: Ribosomal_uS5_N
description: Small ribosomal subunit protein uS5, N-terminal

phrase: GTFGATKIIVLPARRGTGVVAGGAAKPVFELAGYTDVLTKIIGSTNPDNVVRAVFDALLQLKTPEQIAEE
type: DOMAIN
name: Ribosomal_uS5_C
description: Small ribosomal subunit protein uS5, C-terminal

phrase: GRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLA
type: CONSERVED_SITE
name: Ribosomal_uS5_N_CS
description: Small ribosomal subunit protein uS5, N-terminal, conserved site
Protein sequence:
MKISSFISTSLPLPASVSGSSSVGEMSGRSVSQQKSDQYANNLAGRTESPQGSSLASRIIERLSSMAHSVIGFIQRMFSEGSHKPVVTPALTPAQMPSPTSFSDSIKQLAAETLPKYMQQLSSLDAETLQKNHDQFATGSGPLRGSITQCQGLMQFCGGELQAEASAILNTPVCGIPFSQWGTVGGAASAYVASGVDLTQAANEIKGLGQQMQQLLSLM

Annotated regions:
phrase: ETLQKNHDQFATGSGPLRGSITQCQGLMQFCGGELQAEASAILNTPVCGIPFSQWGTVGGAASAYVAS
type: DOMAIN
name: YopE_GAP_dom
description: Virulence factor YopE, GAP domain

phrase: FSDSIKQLAAETLPKYMQQLSSLDAETLQKNHDQFATGSGPLRGSITQCQGLMQFCGGELQAEASAILNTPVCGIPFSQWGTVGGAASAYVASGVDLTQAANEIKGLGQQMQQLLS
type: DOMAIN
name: YopE_GAP_dom
description: Virulence factor YopE, GAP domain

phrase: MKISSFISTSLPLPASVSGSSSVGEMSGRSVSQQKSDQYANNLAGRTESPQGSSLASRIIERLSSMAHSVIGFIQRMFSEGSHKPVVTPALTPAQMPSPTSFSDSIKQLAAETLPKYMQQLSSLD
type: DOMAIN
name: YopE_N_dom
description: YopE, N-terminal domain
Protein sequence:
MVNIGVVGATGQVGGVMRALLADRKFPASSVRFFASARSAGKTLPWGDGEIVVEDASTADPSGLDIALFSAGATMSREQAPRFAAAGVTVIDNSSAWRKDPDVPLVVSEVNGELAKTPPKGIIANPNCTTMAAMPVLKPLHDEAGLTRLIVSSYQAVSGSGLAGVEELASQARAVIDDVEKLVYDGSSVTFPAPDKYVAPIAFDVIALAGALVDDGSGETDEDQKLRNESRKILGLPELLVSGTCVRVPVFTGHSLSINAEFDRPISPERAREILSGAAGVDVVDVPTPLAAAGQDNSLVGRIRQDPGVPEGRGLALFVSGDNLRKGAALNTIQIAELLV

Annotated regions:
phrase: VSGTCVRVPVFTGH
type: CONSERVED_SITE
name: Asp-semialdehyde_DH_CS
description: Aspartate-semialdehyde dehydrogenase, conserved site

phrase: NIGVVGATGQVGGVMRALLADRKFPASSVRFFASARSAGKTLPWGDGEIVVEDASTADPSGLDIALFSAGATMSREQAPRFAAAGVTVIDNSSAWRKDPDVPLVVSEVNGE
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: NIGVVGATGQVGGVMRALLADRKFPASSVRFFASARSAGKTLPWGDGEIVVEDASTADPSGLDIALFSAGATMSREQAPRFAAAGVTVIDNSSAWRKDPDVPLVVSEVNGELAKT
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: LKPLHDEAGLTRLIVSSYQAVSGSGLAGVEELASQARAVIDDVEKLVYDGSSVTFPAPDKYVAPIAFDVIALAGALVDDGSGETDEDQKLRNESRKILGLPELLVSGTCVRVPVFTGHSLSINAEFDRPISPERAREILSGAAGVDVVDVPTPLAAAGQDNSLVGRIRQDPGVPEGRGLALFVSGDNLR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain
Protein sequence:
MAKANTAVRVRKKVRKSVSEGIVHVHASFNNTIITITDRQGNALSWATSGGAGFKGSRKSTPFAAQVAAEHAGKVAQEYGVKNLEVRIKGPGPGRESAVRALNSLGFKITSISDVTPVPHNGCRPPKKRRI

Annotated regions:
phrase: VRALNSLGFKITSISDVTPVPH
type: CONSERVED_SITE
name: Ribosomal_uS11_CS
description: Small ribosomal subunit protein uS11, conserved site
Protein sequence:
MCMVIFAPLFAIFAFATCGGYSGGLRLSVDCVNKTESNLSIDIAFAYPFRLHQVTFEVPTCEGKERQKLALIGDSSSSAEFFVTVAVFAFLYSLAATVVYIFFQNKYRENNRGPLIDFIVTVVFSFLWLVGSSAWAKGLSDVKVATDPKEVLLLMSACKQPSNKCMAIHSPVMSSLNTSVVFGFLNFILWAGNIWFVFKETGWHSSGQRYLSDPMEKHSSSYNQGGYNQDSYGSSSGYSQQASLGPTSDEFGQQPTGPTSFTNQI

Annotated regions:
phrase: MCMVIFAPLFAIFAFATCGGYSGGLRLSVDCVNKTESNLSIDIAFAYPFRLHQVTFEVPTCEGKERQKLALIGDSSSSAEFFVTVAVFAFLYSLAATVVYIFFQNKYRENNRGPLIDFIVTVVFSFLWLVGSSAWAKGLSDVKVATDPKEVLLLMSACKQPSNKCMAIHSPVMSSLNTSVVFGFLNFILWAGNIWFVFKET
type: DOMAIN
name: Marvel
description: Marvel domain

phrase: APLFAIFAFATCGGYSGGLRLSVDCVNKTESNLSIDIAFAYPFRLHQVTFEVPTCEGKERQKLALIGDSSSSAEFFVTVAVFAFLYSLAATVVYIFFQNKYRENNRGPLIDFIVTVVFSFLWLVGSSAWAKGLSDVKVATDPKEVLLLMSACKQPSNKCMAIHSPVMSSLNTSVVFGFLNFILWAGNIW
type: DOMAIN
name: Marvel
description: Marvel domain
Protein sequence:
MFVDSVDIFIASGKGGAGAVSFRREKFVIHGGPDGGDGGDGGDVYVEVDNNTDTLSKFRGARHYKAKNGQPGGSRRCSGKRGNDVVIKVPLGTQILDFDTKELIVDMDTCPMRVCLLKGGKGGLGNTHFKNAANQAPTYAQSGLSGEEKHILLELKLIADVGLVGFPNVGKSTLISTLSNAKPEVANYEFTTLIPHLGVVDADEFSSFVMADIPGIIEGASGGKGLGIAFLKHIERTGFLLFVLDIMREQSLKEQWEILSLELEKFSPILSQRAFGIVLSKSDMQHLGEEFADKFDKQTQELEQFLAQKGNPQSFILPISSIQKSGLKELVFEILNSLRINPQSILQ

Annotated regions:
phrase: DVGLVGFPNVGKSTLISTLSNAKPEVANYEFTTLIPHLGVVDADEFSSFVMADIPGIIEGASGGKGLGIAFLKHIERTGFLLFVLDIMREQSLKEQWEILSLELEKF
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: ADVGLVGFPNVGKSTLISTLSNAKPEVANYEFTTLIPHLGVVDADEFSSFVMADIPGIIEGASGGKGLGIAFLKHIERTGFLLFVLDIMREQSLKEQWEILSLELEKFSPILSQRAFGIVLSKSDMQHLGEEFADKFDKQTQELEQFLAQKGNPQSFILPISSIQKSGLKELVFEILNS
type: DOMAIN
name: G_OBG
description: OBG-type guanine nucleotide-binding (G) domain

phrase: VGLVGFPNVGKSTLISTLSN
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: KPEVANYEFTTLIPHLGV
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: MADIPGIIEGASGGK
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: GIAFLKHIERTGFLLFVL
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: DIPGIIEGASGGK
type: CONSERVED_SITE
name: GTP1-OBG_CS
description: GTP1/OBG, conserved site

phrase: ADVGLVGFPNVGKSTLISTLSNAKPEVANYEFTTLIPHLGVVDADEFSSFVMADIPGIIEGASGGKGLGIAFLKHIERTGFLLFVLDIMREQSLKEQWEILSLELEKFSPILSQRAFGIVLSKSDMQHLGEEFADKFDKQTQELEQFLAQKGNPQSFILPISSIQKSGLKELVFEILNSL
type: DOMAIN
name: G_OBG
description: OBG-type guanine nucleotide-binding (G) domain

phrase: MFVDSVDIFIASGKGGAGAVSFRREKFVIHGGPDGGDGGDGGDVYVEVDNNTDTLSKFRGARHYKAKNGQPGGSRRCSGKRGNDVVIKVPLGTQILDFDTKELIVDMDTCPMRVCLLKGGKGGLGNTHFKNAANQAPTYAQSGLSGEEKHILLELKL
type: DOMAIN
name: GTP1_OBG_dom
description: GTP1/OBG domain

phrase: VDSVDIFIASGKGGAGAVSFRREKFVIHGGPDGGDGGDGGDVYVEVDNNTDTLSKFRGARHYKAKNGQPGGSRRCSGKRGNDVVIKVPLGTQILDFDTKELIVDMDTCPMRVCLLKGGKGGLGNTHFKNAANQAPTYAQSGLSGEEKHILLELK
type: DOMAIN
name: GTP1_OBG_dom
description: GTP1/OBG domain
Protein sequence:
MSSPITPLSPGCVMLPARPEPVPVDPKTTAVIVIDMQNAYASPGGYLDLAGFDISGAAKVIHEIKGVLEVARSAGMQVIYFQNGWDDQYVEAGGPGSPNWWKSNALKTMRAKPELQGKLLARGQWDYELVDELKPQPGDIQLHKTRYSGFFNSQLDSVLRARGIRHLVFVGIATNVCVESTLRDGFFLEYFGTVLEDATHQAGPEFVQKAALFNIESFFGWVSTTADFKGTFGQLAPRT

Annotated regions:
phrase: TAVIVIDMQNAYASPGGYLDLAGFDISGAAKVIHEIKGVLEVARSAGMQVIYFQNGWDDQYVEAGGPGSPNWWKSNALKTMRAKPELQGKLLARGQWDYELVDELKPQPGDIQLHKTRYSGFFNSQLDSVLRARGIRHLVFVGIATNVCVESTLRDGFFLEYFGTVLEDATHQAGPEFVQKAALFNIESFFGWVSTTA
type: DOMAIN
name: Isochorismatase-like_dom
description: Isochorismatase-like domain
Protein sequence:
MATPSSIPAEPKRDVINRIHRVTRENRSLWYQMTVLQQPERARACGSGSKANSDRRPVDPPPVVELRIIEGPSVEEGKDITFDYNANFFLYASLEHARPLARGRVNTPAAGNPPILTGVPASGMAYLDRPTEAGYFIFPDLSVRHEGLYILTFSLFETTKEERDYDLEPADGDLPPGVDYRMEIKTEPFSVYSAKKFPGLMESTQLSKTVADQGCRVRIRRDVRMRKRESKPGAGNSNSGGNGFERREEDFSRRRTITPASEDPHSIRNRSHSNSSEHRTPYTDASRRPSMVDSYPPPPPPPPPSYEPAPSASRHLDFGDSSAAQYPTPRQYAHQPGLQITPGPPNGSYAPTAQSPYSKTDVPYGYVNRNIPPSCPSPAPSLKHELYDRRQSTSTYVPPSPSVYSTEGHHRRDSRPSYPPTPVAAPHPRPMHSQTSLPALKIDQLVSPVSPLPPIEPQTGPAPELPPINVGGKRKHESVFAQSTRPLHNGQRQVDPHYGRSHRGYSPDHDQGWYSRADGQISSVQFNRYYDE

Annotated regions:
phrase: YQMTVLQQPERARACGSGSKANSDRRPVDPPPVVELRIIEGPSVEEGKDITFDYNANFFLYASLEHA
type: DOMAIN
name: Velvet_dom
description: Velvet domain

phrase: NTPAAGNPPILTGVPASGMAYLDRPTEAGYFIFPDLSVRHEGLYILTFSLFETTKEERDYDLEPADGDLPPGVDYRMEIKTEPFSVYSAKKFPGLMESTQLSKTVADQGCRVRIRR
type: DOMAIN
name: Velvet_dom
description: Velvet domain

phrase: NRSLWYQMTVLQQPERARACGSGSKANSDRRPVDPPPVVELRIIEGPSVEEGKDITFDYNANFFLYASLEHARPLARGRVNTPAAGNPPILTGVPASGMAYLDRPTEAGYFIFPDLSVRHEGLYILTFSLFETTKEERDYDLEPADGDLPPGVDYRMEIKTEPFSVYSAKKFPGLMESTQLSKTVADQGCRVRI
type: DOMAIN
name: Velvet_dom
description: Velvet domain
Protein sequence:
MYSQTKIAIPIFQAKKEDVIKVAEDCIEKGADVLEFRIDALDNPNFDDIKEIIEEINFPIIATNRISSEGGSFKGSEEERIDILLKCAPLVDYVDIELQSDDRYIKQIHDTGVTTIVSYHDFHKTPEINEIMYIVEKEQKLGDIAKVAFMPNDLDDTLKILAILSHCENTIAISMSDLGSYTRVMASKFDSPITFAAGRDVTAPGQIDIETMKSLLNMDLNLME

Annotated regions:
Protein sequence:
MAAATMALSSPALAGKAAAKVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK

Annotated regions:
Protein sequence:
MTFLRVVKNKAYFRRFQVKFRRRREGKTDYYARRRLVAQDKNKYDSPKYRLVVRLTNKRVICQIVSSTLVGDKVHASADSSELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLKLDSQFVGKVEADGELYHVEEEDNERRPFKALLDVGIKNVTTGNRVFGALKGACDGGLHVPHSEKRFPGYSVDDENNGSYDAQAHRDRIFGTHVANYMEYLKEEDPEKYKRQFSAYLKLGLDSESLEDMYAKAHENIRKNPVLPTKPKRKLKHVREGSKVLTSKGSYVRNVKISKAQRRERVKQKISLLVNES

Annotated regions:
phrase: LEDMYAKAHENIRKNPVLPTKPKRKLKHVREGSKVLTSKGSYVRNVKISKAQRRERVKQKISL
type: DOMAIN
name: Ribosomal_uL18_C_euk
description: Large ribosomal subunit protein uL18, C-terminal, eukaryotes
Protein sequence:
MXVKGTQMNWQCLWTWGTLIIGLGIMCSASKPLWVTVYYGVPVWEDADTTLFCASDAKAYSTEKHNVWATHACVPTDPNPQELPLKNVTENFNMWKNNMVEQMQEDIISLWDESLKPCVKLTPLCVTLNCXXPNNSCTKNSENSTLINCEDIRNCSFNITTELQDKKKQEYALFHRLDVVPMGNENGSDYRLINCNVSTIKQACPKVSFDPIPIHYCAPAGFAILICKDEEFNGTGPCKNVSTVQCTHGIKPVVSTQLLLNGSLAGKEXMIRSENLTDNAKVIIVQFNKSIEIKCTRPNNNTRRSITIGPGRSXYTNNIIGDIRQAYCEINGTXWNETLEMVRAKLAKSYNKNITDIXFGPPTGGDLEITTHSFNCRGEFFYCNTSKLFNNTKPNTGNMTILPCRIKQIVRMWQRVGQAMYAPPIEGNITCVSNITGLIITRDGGTNGTNVTEIFRPAGGNMKDNWRSELYKYKVVKIKPLGVAPTEARRLVVQREKRAVGMATVLFGFLGAAGSTMGAASITLTVQVRQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERFLKDQQLLGLWGCSGKLICTTNVQWNTSWSNKSLXEIWNSTTWIEWEREINNYTQQIYTLIEEAQTQQEKNEQELLSLDKWASLWTWFDISNWLWYIKIFIMIVGGLIGLRIVFTVISIINRVRQGYSPLSFQTHTHHQGGPGRPEEIEGEGGEKDNDRSTRLVRGFLPLVWDDLRSLCLFSYHRLIDLLLIAART

Annotated regions:
phrase: VQVRQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERFLKDQQLLGLWGCSGKLICTTNVQWNTSWSNKSLXEIWNSTTWIEWEREINNYTQQIYTLIEEAQTQQEKNEQELLSLD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWEDADTTLFCASDAKAYSTEKHNVWATHACVPTDPNPQELPLKNVTENFNMWKNNMVEQMQEDIISLWDESLKPCVKLTPLCVTLNCXXPNNSCTKNSENSTLINCEDIRNCSFNITTELQDKKKQEYALFHRLDVVPMGNENGSDYRLINCNVSTIKQACPKVSFDPIPIHYCAPAGFAILICKDEEFNGTGPCKNVSTVQCTHGIKPVVSTQLLLNGSLAGKEXMIRSENLTDNAKVIIVQFNKSIEIKCTRPNNNTRRSITIGPGRSXYTNNIIGDIRQAYCEINGTXWNETLEMVRAKLAKSYNKNITDIXFGPPTGGDLEITTHSFNCRGEFFYCNTSKLFNNTKPNTGNMTILPCRIKQIVRMWQRVGQAMYAPPIEGNITCVSNITGLIITRDGGTNGTNVTEIFRPAGGNMKDNWRSELYKYKVVKIKPLGVAPTEARRLVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: MGAASITLTVQVRQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERFLKDQQLLGLWGCSGKLICTTNVQWNTSWSNKSLXEIWNSTTWIEWEREINNYTQQIYTLIEEAQTQQEKNEQELLSLDKWASLWTWFDISNWLWYIKIFIMIVGGLIGLRIVFTVISIINRVRQGYSPLSFQT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MNATIPQRSAKQNPVELYDLQLQALASIARTLSREQQIDELLEQVLAVLHNDLGLLHGLVTISDPEHGALQIGAIHTDSEAVAQACEGVRYRSGEGVIGNVLKHGNSVVLGRISADPRFLDRLALYDLEMPFIAVPIKNPEGNTIGVLAAQPDCRADEHMPARTRFLEIVANLLAQTVRLVVNIEDGREAADERDELRREVRGKYGFENMVVGHTPTMRRVFDQIRRVAKWNSTVLVLGESGTGKELIASAIHYKSPRAHRPFVRLNCAALPETLLESELFGHEKGAFTGAVKQRKGRFEQADGGTLFLDEIGEISPMFQAKLLRVLQEGEFERVGGNQTVRVNVRIVAATNRDLESEVEKGKFREDLYYRLNVMAIRIPPLRERTADIPELAEFLLGKIGRQQGRPLTVTDSAIRLLMSHRWPGNVRELENCLERSAIMSEDGTITRDVVSLTGVDNESPPLAAPLPEVNLADETLDDRERVIAALEQAGWVQAKAARLLGMTPRQIAYRIQTLNIHMRKI

Annotated regions:
phrase: WNSTVLVLGESGTGKELIASAIHYKSPRAHRPFVRLNCAALPETLLESELFGHEKGAFTGAVKQRKGRFEQADGGTLFLDEIGEISPMFQAKLLRVLQEGEFERVGGNQTVRVNVRIVAATNRDLESEVEKGKFREDLYYRLN
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VLVLGESGTGKEL
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_1
description: Sigma-54 interaction domain, ATP-binding site 1

phrase: VGHTPTMRRVFDQIRRVAKWNSTVLVLGESGTGKELIASAIHYKSPRAHRPFVRLNCAALPETLLESELFGHEKGAFTGAVKQRKGRFEQADGGTLFLDEIGEISPMFQAKLLRVLQEGEFERVGGNQTVRVNVRIVAATNRDLESEVEKGKFREDLYYRLNVMA
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: QIDELLEQVLAVLHNDLGLLHGLVTISDPEHGALQIGAIHTDSEAVAQACEGVRYRSGEGVIGNVLKHGNSVVLGRISADPRFLDRLALYDLEMPFIAVPIKNPEGNTIGVLAAQPDCRADEHMPARTRFLEIVANLLAQTVRLVVNIEDG
type: DOMAIN
name: GAF
description: GAF domain

phrase: QQIDELLEQVLAVLHNDLGLLHGLVTISDPEHGALQIGAIHTDSEAVAQACEGVRYRSGEGVIGNVLKHGNSVVLGRISADPRFLDRLALYDLEMPFIAVPIKNPEGNTIGVLAAQPDCRADEHMPARTRFLEIVANLLAQT
type: DOMAIN
name: GAF
description: GAF domain

phrase: GRFEQADGGTLFLDE
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_2
description: Sigma-54 interaction domain, ATP-binding site 2

phrase: RERVIAALEQAGWVQAKAARLLGMTPRQIAYRI
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: WPGNVRELE
type: CONSERVED_SITE
name: Sigma_54_int_dom_CS
description: Sigma-54 interaction domain, conserved site

phrase: VVGHTPTMRRVFDQIRRVAKWNSTVLVLGESGTGKELIASAIHYKSPRAHRPFVRLNCAALPETLLESELFGHEKGAFTGAVKQRKGRFEQADGGTLFLDEIGEISPMFQAKLLRVLQEGEFERVGGNQTVRVNVRIVAATNRDLESEVEKGKFREDLYYRLNVMAIRIPPLRERTADIPELAEFLLGKIGRQQGRPLTVTDSAIRLLMSHRWPGNVRELENCLERSA
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: ERVIAALEQAGWVQAKA
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: ARLLGMTPRQIAYRIQTLNI
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type
Protein sequence:
MKQVNFCGTGRRKTAVARVILTNGTGKITINTKNFETYLPQPTTRLDMLQPLIISEKKDVYDVRVNVNGGGLCAQAGAIRLGIARALLESIPELRPVLKKAGLLTRDARCVERKKYGLKKARRAPQFSKR

Annotated regions:
phrase: GGGLCAQAGAIRLGIARA
type: CONSERVED_SITE
name: Ribosomal_uS9_CS
description: Small ribosomal subunit protein uS9, conserved site
Protein sequence:
MLRLACLAPLAILIPAAGTAEQARPADDALAALGAQLFVDPALSRNATQSCATCHDPARAFTDPREGKAGLAVSVGDDGQSHGDRNTPTLGYAALVPAFHRDANGKYKGGQFWDGRADDLKQQAGQPMLNPVEMAMPDRAAVAARLRDDPAYRTGFEALFGKGVLDDPERAFDAAAEALAAYQATGEFSPFDSKYDRVMRGEEKFTPLEEFGYTVFITWNCRLCHMQRKQGVAERETFTNFEYHNIGLPVNETAREASGLGADHVDHGLLARPGIEDPAQSGRFKVPSLRNVAVTGPYMHNGVFTDLRTAILFYNKYTSRRPEAKINPETGAPWGEPEVARNLSLAELQSGLMLDDGRVDALVAFLETLTDRRYEPLLEESRAAQKD

Annotated regions:
phrase: LAALGAQLFVDPALSRNATQSCATCHDPARAFTDPREGKAGLAVSVGDDGQSHGDRNTPTLGYAALVPAFHRDANGKYKGGQFWDGRADDLKQQAGQPMLNPVEMAMPDRAAVAARLRDDPAYRTGFEALFGKGVLDDPERAFDAAAEALAAYQATGEFSPFDSKYDRVMRGEE
type: DOMAIN
name: Di-haem_cyt_c_peroxidsae
description: Di-haem cytochrome c peroxidase

phrase: ALAALGAQLFVDPALSRNATQSCATCHDPARAFTDPREGKAGLAVSVGDDGQSHGDRNTPTLGYAALVPAFHRDANGKYKGGQFWDGRADDLKQQAGQPMLNPVEMAMPDRAAVAARLRDD
type: DOMAIN
name: Cyt_c-like_dom
description: Cytochrome c-like domain
Protein sequence:
MTLLALGINHKTAPVSLRERVSFSPDKLDQALDSLLAQPMVQAGVVLSTCNRTELYLSVEERDDLQEALIRWLCDYHNLNEDDLRNSLYWHQDNDAVSHLMRVASGLDSLVLGEPQILGQVKKAFADSQKGHMKASELERMFQKSFSVAKRVRTETDIGASAVSVAFAACTLARQIFESLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQILADEVGAEVIALSDIDERLREADIIISSTASPLPIIGKGMVERALKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRKAAAVEAETIVAQEASEFMAWLRAQSASETIRDYRSQAEQVRDELTAKALAALEQGGDAQTIMQDLAWKLTNRLIHAPTKSLQQAARDGDNERLNILRDSLGLE

Annotated regions:
phrase: LARQIFESLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRERAQILADEVGAEVIALSDIDERLREADIIISSTASPLPIIGKGMVERALKSRRNQPMLLVDIAVPRDVEPEVGKLANAYLYSVDDLQS
type: DOMAIN
name: Shikm_DH/Glu-tRNA_Rdtase
description: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase

phrase: HLMRVASGLDSLVLGEPQILGQV
type: CONSERVED_SITE
name: GluRdtase_CS
description: Glutamyl-tRNA reductase, conserved site

phrase: EAETIVAQEASEFMAWLRAQSASETIRDYRSQAEQVRDELTAKALAALEQGGDAQTIMQDLAWKLTNRLIHAPTKSLQQAARDGDNERLNILRDSL
type: DOMAIN
name: 4pyrrol_synth_GluRdtase_dimer
description: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain

phrase: LGINHKTAPVSLRERVSFSPDKLDQALDSLLAQPMVQAGVVLSTCNRTELYLSVEERDDLQEALIRWLCDYHNLNEDDLRNSLYWHQDNDAVSHLMRVASGLDSLVLGEPQILGQVKKAFADSQKGHMKASELERMFQKSFSVAKRVRTE
type: DOMAIN
name: 4pyrrol_synth_GluRdtase_N
description: Glutamyl-tRNA reductase, N-terminal
Protein sequence:
MADSGSNEEAMKRQAPSVKFDSPSKPDPQQVSQQSNQLSSQKSIQQSTQSKIDPSRIDTKNTTVTTTRPTLDTPPEEEEEKRDGFGNSFEFVLTSLGLAVGLGNIWRFPTRAYNNGGSAFLIPYLTCAFLFGLPAVYFEFLTGQYQGKSPPVIFRRVRPILEGVGWMGVFVAALVAIYYIVIVSWISIYMINICRGHFALWSHCNNDWNNGTSCITMADQYLCKNHTKVMANSTLWNSSLPIPDKMVYFNGACQDANGTDVSTATEQYFMTYIVQPSSGMLDFGGFNWPVFAAMSVCWLLTGLGILKGAKIMGKISYVSVLVPYVLVVVLFINGVFQDGSGVGLEMYFGTPNYTKLYEQDTWTEALKQLCFSLSVGHGGLISLSSYSPKRNNIFRDALIVIIGDTTMSLVGGGAVFATLGYLAKATGQDVKDVVKSGLSLAFVVYPEAMTRMPVPWLWCFIFFLMLFLLGASTEIALVDVFCSCIYDQYPRFRNRKWIVVIAWCSVLYCIGLVFSTRAGYYWFEMFDEYAAGFSSVCTVVCELLVMMYIYGFRNVRDDITEVVGHARNKFTGAIGAHSWYFTANWMVISPSIALILVGLSFVREYPYMGRHDIYPAVFDIFGWFLSFLPVIIVPIFMLLNFIRCRNRGHSYRTLFMLQKQHASYRRIAANYSKDQLALQDQLPDKEPWDEENVDLTDSESESRNAASGDVPIDDVATIDTSSTYHQVY

Annotated regions:
Protein sequence:
MLPPAIHFYLLPLACILMKSCLAFKNDATEILYSHVVKPVPAHPSSNSTLNQARNGGRHFSNTGLDRNTRVQVGCRELRSTKYISDGQCTSISPLKELVCAGECLPLPVLPNWIGGGYGTKYWSRRSSQEWRCVNDKTRTQRIQLQCQDGSTRTYKITVVTACKCKRYTRQHNESSHNFESMSPAKPVQHHRERKRASKSSKHSMS

Annotated regions:
phrase: CRELRSTKYISDGQCTSISPLKELVCAGECLPLPVLPNWIGGGYGTKYWSRRSSQEWRCVNDKTRTQRIQLQCQDGSTRTYKITVVTACKCKRYT
type: DOMAIN
name: Cys_knot_C
description: Cystine knot, C-terminal
Protein sequence:
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPIRPLFPEGFVNEVQVIATVVSVNPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDELKESKLDLVVAGTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQVVIQNINELVKEAGKPRWDWQPEPVNEALNARVAALAEARLSDAYRITDKQERYAQVDVIKSETIATLLAEDENLDENELGEILHAIEKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTARDAQVLDELMGERTDTFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDKFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSDILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQAINAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAATDGEKAKHAIRRIEEITAEIEVGRVYTGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEATEQSQPAAAPEAPAAEQGE

Annotated regions:
phrase: EVGRVYTGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQGRIRLSI
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: GPIGAARVGYINDQYVLNPTQDELKESKLDLVVAGTEAAVLMVESEAELLSEDQMLGAVVFGH
type: DOMAIN
name: ExoRNase_PH_dom2
description: Exoribonuclease, phosphorolytic domain 2

phrase: AVAGIAMGLVKEGDNYVVLSDILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQA
type: DOMAIN
name: ExoRNase_PH_dom2
description: Exoribonuclease, phosphorolytic domain 2

phrase: IRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTARDAQVLDELMGERTDTFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDKFPYTVRVVSEITESNGSSSMASVCGASLALMDAGV
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1

phrase: TVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPIRPLFPEGFVNEVQVIATVVSVNPQVNPDIVAMIGASAALSLSGI
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1

phrase: HTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAATDGEKAKHAIRRIE
type: DOMAIN
name: KH_dom_type_1
description: K Homology domain, type 1

phrase: APRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAATDGEKAKHAIRRIEEIT
type: DOMAIN
name: KH_dom
description: K Homology domain

phrase: GRVYTGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQGRIRLSI
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: IEVGRVYTGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQGRIRLSI
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: LNARVAALAEARLSDAYRITDKQERYAQVDVIKSETIATLLAEDENLDENELGEILHAIEKNVVRSRVLAGEPRIDGR
type: DOMAIN
name: PNPase_PH_RNA-bd_bac/org-type
description: Polyribonucleotide nucleotidyltransferase, RNA-binding domain
Protein sequence:
MASVWQRLGFYASLLKRQLNGGPDVIKWERRVIPGCTRSIYSATGKWTKEYTLQTRKDVEKWWHQRIKEQASKISEADKSKPKFYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRGMQVINPMGWDAFGLPAENAAVERNLHPQSWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLAYQKEALVNWDPVDQTVLANEQVDEHGCSWRSGAKVEQKYLRQWFIKTTAYAKAMQDALADLPEWYGIKGMQAHWIGDCVGCHLDFTLKVHGQATGEKLTAYTATPEAIYGTSHVAISPSHRLLHGHSSLKEALRMALVPGKDCLTPVMAVNMLTQQEVPVVILAKADLEGSLDSKIGIPSTSSEDTILAQTLGLAYSEVIETLPDGTERLSSSAEFTGMTRQDAFLALTQKARGKRVGGDVTSDKLKDWLISRQRYWGTPIPIVHCPVCGPTPVPLEDLPVTLPNIASFTGKGGPPLAMASEWVNCSCPRCKGAAKRETDTMDTFVDSAWYYFRYTDPHNPHSPFNTAVADYWMPVDLYIGGKEHAVMHLFYARFFSHFCHDQKMVKHREPFHKLLAQGLIKGQTFRLPSGQYLQREEVDLTGSVPVHAKTKEKLEVTWEKMSKSKHNGVDPEEVVEQYGIDTIRLYILFAAPPEKDILWDVKTDALPGVLRWQQRLWTLTTRFIEARASGKSPQPQLLSNKEKAEARKLWEYKNSVISQVTTHFTEDFSLNSAISQLMGLSNALSQASQSVILHSPEFEDALCALMVMAAPLAPHVTSEIWAGLALVPRKLCAHYTWDASVLLQAWPAVDPEFLQQPEVVQMAVLINNKACGKIPVPQQVARDQDKVHEFVLQSELGVRLLQGRSIKKSFLSPRTALINFLVQD

Annotated regions:
phrase: PYPSGKLHMGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: LKDWLISRQRYWGTPIPIVHCPVCGPTPVPLEDLPVTLPNIASFTGKGGPPLAMASEWVNCSCPRCKGAAKRETDTMDTFVDSAWYYFRYTDPHNPHSPFNTAVADYWMPVDLYIGGKEHAVMHLFYARFFSHFCHDQKMVKHREPFHKLLAQGLI
type: DOMAIN
name: aa-tRNA-synth_Ia
description: Aminoacyl-tRNA synthetase, class Ia

phrase: EKMSKSKHNGVDPEEVVEQYGIDTIRLYILFAAPPEKDIL
type: DOMAIN
name: aa-tRNA-synth_Ia
description: Aminoacyl-tRNA synthetase, class Ia

phrase: KWWHQRIKEQASKISEADKSKPKFYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRGMQVINPMGWDAFGLPAENAAVERNLHPQSWTQSNIKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLAYQKEALVNWDPVDQTVLANEQVDEHGCSWRSGAKVEQKYLRQWFIKTTAYAKAMQDAL
type: DOMAIN
name: aa-tRNA-synth_Ia
description: Aminoacyl-tRNA synthetase, class Ia

phrase: HWIGDCVGCHLDFTLKVHGQATGEKLTAYTATPEAIYGTSHVAISPSHRLLHGHSSLKEA
type: DOMAIN
name: Leu_tRNA-synth_edit
description: Leucyl-tRNA synthetase, editing domain

phrase: KLWEYKNSVISQVTTHFTEDFSLNSAISQLMGLSNALSQASQSVILHSPEFEDALCALMVMAAPLAPHVTSEIWAGLALVPRKLCAHYTWDASVLLQAWPAVDPEFLQQPEVVQMAVLINNKACG
type: DOMAIN
name: M/V/L/I-tRNA-synth_anticd-bd
description: Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
Protein sequence:
MEITLFDPIDAHLHVRENALLKAVLRYSSEPFSAAVIMPNLSKPLINTPTTLEYEEEILNHSSNFKPLMSLYFNDGLTLEELQRAQEKGVRFLKLYPKGMTTNAQNGTSDLLGEKTLEILENAQKLGFILCIHAEQAGFCLDKEFLCHSVLETFALSFPKLKIIIEHLSDWRSIALIEKHDNLYATLTLHHISMTLDDLLGGSLNPHCFCKPLIKTKKDQERLLSLALKAHPKISFGSDSAPHFISKKHSANIPAGIFSAPILLPALCELFEKHNALENLQAFISDNAKKIYALDNLPAKKVRLSKTPFIVPTHTLCLNEKIAILRGGETLSWNIQEIA

Annotated regions:
phrase: GSDSAPHFISK
type: CONSERVED_SITE
name: Dihydroorotase_CS
description: Dihydroorotase, conserved site

phrase: DAHLHVRE
type: CONSERVED_SITE
name: Dihydroorotase_CS
description: Dihydroorotase, conserved site
Protein sequence:
MKYIFITGGVLSSLGKGVTASSVGMLLKSSGYKVGVLKIDPYINIDPGTMSPFEHGEVFVTDDGAETDLDIGNYERFLNESYSKKSNFTTGQVYSAVIEKERKGEYLGKTIQVIPHIVDEIKERIVSAGENYDILIIELGGTVGDIEGLPFLEAIREMKFSLPPEDTLFIHVTLIPYIKVAGELKTKPTQHSVQELRRIGISPKILIARSERHLTKAIRSKLALSCDVAETSVIEALDSNTIYDVPLRLYNNNILKPIAKHLEIPELKPQLDHWDSLVKRIVAPTASVKIGFVGKYMKLKESYKSLIESFIHAGANLNTEVQIEWIDSEELEKNETPIDEVFSEVDGILVAGGFGNRGIEGKISAIKFARENEIPFLGICLGMQMAMVEFARNVLKLEDANSLEFNPETENPVVYLIDSFLNQNGETEIRTHSTPLGGTMRLGAYECKTKEGSNLREAYSSEIISERHRHRYEANPEYREALEKAGMSITGESNGLIEAVEIPNHPWFLGVQFHPEFKSRLEKPNPSILAFVKNSLEKKRL

Annotated regions:
phrase: KYIFITGGVLSSLGKGVTASSVGMLLKSSGYKVGVLKIDPYINIDPGTMSPFEHGEVFVTDDGAETDLDIGNYERFLNESYSKKSNFTTGQVYSAVIEKERKGEYLGKTIQVIPHIVDEIKERIVSAGENYDILIIELGGTVGDIEGLPFLEAIREMKFSLPPEDTLFIHVTLIPYIKVAGELKTKPTQHSVQELRRIGISPKILIARSERHLTKAIRSKLALSCDVAETSVIEALDSNTIYDVPLRLYNNNILKPIA
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: KYIFITGGVLSSLGKGVTASSVGMLLKSSGYKVGVLKIDPYINIDPGTMSPFEHGEVFVTDDGAETDLDIGNYERFLNESYSKKSNFTTGQVYSAVIEKERKGEYLGKTIQVIPHIVDEIKERIVSAGENYDILIIELGGTVGDIEGLPFLEAIREMKFSLPPEDTLFIHVTLIPYIKVAGELKTKPTQHSVQELRRIGISPKILIARSERHLTKAIRSKLALSCDVAETSVIEALDSNTIYDVPLRLYNNNILKPIAKHLE
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: KESYKSLIESFIHAGANLNTEVQIEWIDSEELEKNETPIDEVFSEVDGILVAGGFGNRGIEGKISAIKFARENEIPFLGICLGMQMAMVEFARNVLKLEDANSLEFNPETENPVVYLIDSFLNQNGETEIRTHSTPLGGTMRLGAYECKTKEGSNLREAYSSEIISERHRHRYEANPEYREALEKAGMSITGESNGLIEAVEIPNHPWFLGVQFHPEFKSRLEKPNPS
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: VKIGFVGKYMKLKESYKSLIESFIHAGANLNTEVQIEWIDSEELEKNETPIDEVFSEVDGILVAGGFGNRGIEGKISAIKFARENEIPFLGICLGMQMAMVEFARNVLKLEDANSLEFNPETENPVVYLIDSFLNQNGETEIRTHSTPLGGTMRLGAYECKTKEGSNLREAYSSEIISERHRHRYEANPEYREALEKAGMSITGESNGLIEAVEIPNHPWFLGVQFHPEFKSRLEKPNPSILAF
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain