nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSYHFDHSKPVFPEDAASKDYATSLDAADPLAVFREKFILPSKANIACKKLAKPNLSSEPCIYFCGNSLGVQPKATAKYLEAQLDTWSSIGVNGHFTNLEDSPLKSWQLLAEQAAGSMCKIVGALPDEVAAMGTLTANLHLLLASFYKPTSPKHKILMDWKAFPSDHYAIESHLAWHGLDPQTSMVLIGPNENEYEIPTEKILSSIDEHADEAALILLPGIQYYTGQLFDIQKITAYAQSKGLVVGWDLAHAYGNAELKLHDWNVDFAVWCTYKYGNAGPGAMGGLFVHQRHGAVDYSEGEDAPKFRHRLTGWYGGDMSVRFKMDNKFKPIPGAGGFQLSNPSAIDLAALCASLSIFDETSMTELRKKSILLTAYLEYLLLKDTTDESRPFRIITPTNPDARGAQLSLLLRPGLLQNVASRLQDAAIICDKREPGVVRVAPAPLYNTFAEVWTFVQQFKAALDS

Annotated regions:
Protein sequence:
MERREEQPGAAGAGAAPALDFTVENVEKALHQLYYDPNIENKNLAQKWLMQAQASPQAWHFSWQLLQPDKVPEIQYFGASALHIKISRYWSDIPTDQYESLKAQLFTQITRFASGSKIVLTRLCVALASLALSMMPDAWPCAVADMVRLFQAEDSPVDSQGRCLALLELLTVLPEEFQTSRLPQYRKSLVRTSLAVECGAVFPLLEQLLQQPSSPSCVRQKVLKCFSSWVQLEVPLQDCEALIQAAFAALQDSELFDSSVEAIVNAISQPDAQRYVNTLLKLIPLVLGLQDQLRQAVQNGDMETSHGICRIAVALGENHSRALLDQVEHWQSFLALVNMIMFCTGIPGHFPVNETTSSLTLTFWYTLQDDILSFEAEKQAVYQQVYRPVYFQLVDVLLHKAQFPSDEEYGFWSSDEKEQFRIYRVDISDTLMYVYEMLGAELLSNLYDKLGRLLTSSEEPYSWQHTEALLYGFQSIAETIDVNYSDVVPGLIGLIPRISISNVQLADTVMFTIGALSEWLADHPVMINSVLPLVLHALGNPELSISSVSTLKKICRECKYDLPPYAANIVAVSQDVLMKQIHKTSQCMWLMQALGFLLSALQVEEILKNLHSLISPYIQQLEKLAEEIPNPSNKLAIVHILGLLSNLFTTLDVSHHEDDHEGSELRKLPVPQGPNPVVVVLQQVFQLIQKVLSKWLNDAQVVEAVCAIFEKSVKTLLDDFAPMVPQLCEMLGRMYSTIPQASALDLTRQLVHIFAHEPAHFPPIEALFLLVTSVTLTLFQQGPRDHPDIVDSFMQLLAQALKRKPDLFLCERLDVKAVFQCAVLALKFPEAPTVKASCGFFTELLPRCGEVEPVGKVVQEDGRMLLIAVLEAIGGQASRSLMDCFADILFALNKHCFSLLSVWIKEALQAPGFPSARLSPEQKDTFSQQILRERVNKRRVKEMVKEFTLLCRGLHGTDYTADY

Annotated regions:
phrase: AQKWLMQAQASPQAWHFSWQLLQPDKVPEIQYFGASALHIKISRYWSDIPTDQYESLKAQLF
type: DOMAIN
name: Importin-beta_N
description: Importin-beta, N-terminal domain

phrase: LKFPEAPTVKASCGFFTELLPRCGEVEPVGKVVQEDGRMLLIAVLEAIGGQASRSLMDCFADILFALNKHCFS
type: REPEAT
name: Importin_rep_3
description: Importin 13 repeat

phrase: AQKWLMQAQASPQAWHFSWQLLQPDKVPEIQYFGASALHIKISRYWSDIPTDQYESLKAQLFTQIT
type: DOMAIN
name: Importin-beta_N
description: Importin-beta, N-terminal domain

phrase: QFPSDEEYGFWSSDEKEQFRIYRVDISDTLMYVYEMLGA
type: REPEAT
name: Importin_rep_1
description: Importin 13, repeat 1

phrase: KIVLTRLCVALASLALSMMPDAWPCAVADMVRLFQAEDSPVDSQGRCLALLELLTVLPEEFQTSRLPQYRKSLVRTSLAVECGAVFPLLEQLLQQPSSPSCVRQKVLKCFSSWVQLEVPLQDCEALIQAAFAALQDSELFDSSVE
type: DOMAIN
name: Exportin-1/Importin-b-like
description: Exportin-1/Importin-beta-like

phrase: PSNKLAIVHILGLLSNLFTTLDVSHHEDDHEGSELRKLPVP
type: REPEAT
name: Importin_rep_2
description: Importin 13 repeat 2

phrase: TSQCMWLMQALGFLLSALQVEEILKNLHSLISPYIQQLEKLAE
type: REPEAT
name: Importin_rep_2
description: Importin 13 repeat 2

phrase: AQKWLMQAQASPQAWHFSWQLLQPDKVPEIQYFGASALHIKISRYWSDIPTDQYESLKAQLFTQIT
type: DOMAIN
name: Importin-beta_N
description: Importin-beta, N-terminal domain
Protein sequence:
MAAAQAVEEMRTRVVLGEFGVRNVHTTDFPGNYAGYDDAWDQNRFEKNFRVDVVQMDEDTLEFDMVGIDAAIANAFRRILLAEVPTMAVEKVLVYNNTSIVQDEILAHRLGLIPILADPRLFEYRNQGEEEGTEIDTLQFRLQVRCTRNPNAAKDSSDPNELYVNHKVYTRHMTWVPLGNQADVFPEGTIRPVHDDILIAQLRPGQEIDLMMHCVKGIGKDHAKFSPVATASYRLLPAITLLEPVEGEAAEELSQCFSPGVIEVEEVQGKKVARVANARLDTFSREIFRHEKLKKAVRLARVRDHYIFSVESTGVLPPDVLVSEAIKILMGKCRRFLDELDAVEMD

Annotated regions:
phrase: NAFRRILLAEVPTMAVEKVLVYNNTSIVQDEILAHRLGLI
type: CONSERVED_SITE
name: DNA-dir_RNA_pol_30-40kDasu_CS
description: DNA-directed RNA polymerase, 30-40kDa subunit, conserved site

phrase: TLEFDMVGIDAAIANAFRRILLAEVPTMAVEKVLVYNNTSIVQDEILAHRLGLIPILADPRLFEYRNQGEEEGTEIDTLQFRLQVRCTRNPNAAKDSSDPNELYVNHKVYTRHMTWVPLGNQADVFPEGTIRPVHDDILIAQLRPGQEIDLMMHCVKGIGKDHAKFSPVATASYRLLPAITLLEPVEGEAAEELSQCFSPGVIEVEEVQGKKVARVANARLDTFSREIFRHEKLKKAVRLARVRDHYIFSVESTGVLPPDVLVSEAIKILMGKCRRFLD
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: DEILAHRLGLIPILADPRLFEYRNQGEEEGTEIDTLQFRLQVRCTRNPNAAKDSSDPNELYVNHKVYTRHMTWVPLGNQADVFPEGTIRPVHDDILIAQLRPGQEIDLMMHCVKGIGKDHA
type: DOMAIN
name: DNA-dir_RNA_pol_insert
description: DNA-directed RNA polymerase, insert domain

phrase: EFDMVGIDAAIANAFRRILLAEVPTMAVEKVLVYNNTSIVQDEILAHRLGLIPILADPRLFEYRNQGEEEGTEIDTLQFRLQVRCTRNPNAAKDSSDPNELYVNHKVYTRHMTWVPLGNQADVFPEGTIRPVHDDILIAQLRPGQEIDLMMHCVKGIGKDHAKFSPVATASYRLLPAITLLEPVEGEAAEELSQCFSPGVIEVEEVQGKKVARVANARLDTFSREIFRHEKLKKAVRLARVRDHYIFSVESTGVLPPDVLVSEAIKILMGK
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type
Protein sequence:
MNDKLLKVVDRFAGLRVGVIGEAMLDVYTEGDVSRICREAPVPVVTVSEERAVPGGAANTAANLVSLGARPRFLSVVGDDYEARMLMRALQAAGVPTRDLLVHPRRRTLVKRRIIGAGQMLLRVDVGDVEAVNGSLERALLERMHSLFEESDLIVVSDYGYGIMTPTLIAALAACQRSMPRVLVVDSKDLALYQDVGVTVAKPNYAEALRLLGREVAEPNEDRLALMHLNGQKLLEVTGAEIVALTLDRDGAIIFEVGGEPHQTYAEPRPNSHASGAGDTFVSAFGLALAAGAHTHAAAELASAATALVVERNGTTTCSAVELRDFLSSIDKHVQDLDLLRARMDLYRRQGKRLVFTNGCFDILHRGHIAYLNRAKEQGDILVVGVNSDASVARLKGPERPINTLEDRIQVLAALSCIDHLVPFEEDTPENLLRVVRPDVFVKGGDYTRETLPEAPLVEALGGRVEILPYIQDRSTSLIIERIRQTCCEQAEGQLQVA

Annotated regions:
phrase: YRRQGKRLVFTNGCFDILHRGHIAYLNRAKEQGDILVVGVNSDASVARLKGPERPINTLEDRIQVLAALSCIDHLVPFEEDTPENLLRVVRPDVFVKGGDYTRETLPEAPLVEALGGRVEILPYIQDRSTSLIIERIR
type: DOMAIN
name: RfaE_dom_II
description: RfaE bifunctional protein, domain II

phrase: VFTNGCFDILHRGHIAYLNRAKEQGDILVVGVNSDASVARLKGPERPINTLEDRIQVLAAL
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: GGAANTAANLVSLGARPRFLSVV
type: CONSERVED_SITE
name: Carboh/pur_kinase_PfkB_CS
description: Carbohydrate/purine kinase, PfkB, conserved site

phrase: GVIGEAMLDVYTEGDVSRICREAPVPVVTVSEERAVPGGAANTAANLVSLGARPRFLSVVGDDYEARMLMRALQAAGVPTRDLLVHPRRRTLVKRRIIGAGQMLLRVDVGDVEAVNGSLERALLERMHSLFEESDLIVVSDYGYGIMTPTLIAALAACQRSMPRVLVVDSKDLALYQDVGVTVAKPNYAEALRLLGREVAEPNEDRLALMHLNGQKLLEVTGAEIVALTLDRDGAIIFEVGGEPHQTYAEPRPNSHASGAGDTFVSAFGLALAAGAHTHAAAELASAATALVVERNGTTTC
type: DOMAIN
name: PfkB_dom
description: Carbohydrate kinase PfkB

phrase: FTNGCFDILHRGHIAYLNRAKEQGDILVVGVNSDASVARLKGPERPINTLEDRIQVLAALSCIDHLVPFEEDTPENLLRVVRPDVFVKGGDYTRETLPEAPLVEALG
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain
Protein sequence:
MDDNKKKALAAALGQIERQFGKGAVMRMGDHDRQAIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSETRVKVVKNKVAPPFRQAEFQILYGKGIYLNGEIVDLAVLHGFVEKSGAWYSYQGSKIGQGKANSAKFLADNPEICKALEKQIRDKLLTPGVDTKAVGSREAVAADDMSEADVDI

Annotated regions:
phrase: GEIVDLAVLHGFVEKSGAWYSYQGSKIGQGKANSAKFLADNPEICKALEKQIRDK
type: DOMAIN
name: RecA-like_C
description: RecA-like, C-terminal

phrase: KALAAALGQIERQFGKGAVMRMGDHDRQAIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSETRVKVVKNKVAPPFRQAEFQILYGKG
type: DOMAIN
name: RecA-like_N
description: RecA-like, N-terminal

phrase: AIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIKNANCLVIFINQ
type: DOMAIN
name: RecA_ATP-bd
description: DNA recombination and repair protein RecA-like, ATP-binding domain

phrase: KGRIVEIYGPESSGKTTLTLSVIAQAQKMGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAIDVIVVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRT
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: GVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSETRVKVVKNKVAPPFRQAEFQILYGKGIYLNG
type: DOMAIN
name: RecA_monomer-monomer_interface
description: DNA recombination and repair protein RecA, monomer-monomer interface

phrase: ALKFYASV
type: CONSERVED_SITE
name: DNA_recomb/repair_RecA_CS
description: DNA recombination/repair protein RecA, conserved site
Protein sequence:
MIEVLLVTICLAVFPYQGSSIILESGNVNDYEVVYPRKVTAVPKGAVQQKYEDAMQYEFKVNGEPVVLHLEKNKELFSEDYSETHYSPDGREITTYPSVEDHCYYHGRIQNEADSTASISACNGLKGHFKLQGETYLIEPLKLPDSEAHAVFKYENVEKEEEAPKMCGVTETNWKSDEPIKKASQLVVTAEQQRFPRRYVKLAIVADHRMYTKHKKNLKPWVFQMVNSVHQIYRSMNVLIALVYLNIWKKNDKITAQSASNVTLDLFGNWRETVLLKRKRHDCAQLLTAIDFDGPTIGRAHVSSVCDPKRSTGIVQNYTEINLVNAVIMAHELGHNLGMDHDGNQCNCHACIMSAVINNPPSERFSGCSMGYYQTFLTAYNPQCILNALSKRDIITPPVCGNELLEEGEECDCGSPENCQYQCCNATTCKLHSWVECESGECCEQCRFKKAGAVCRAARTECDIPENCTDQSADCPTDSFHRNGQPCLYNHGYCYNGNCPVMHYQCYGLFGPNATVGQDGCFDANDRGDEYFYCRKENEKYIPCAQEDVKCGRLFCTYIYDINLCRYDYSANGMVAQGTKCADGKVCNSNRQCADVNTAY

Annotated regions:
phrase: NGQPCLYNHGYCYNGNCPVMHYQCYGLFGPNATVGQDGCFDANDRGDEYFYCRKENEKYIPCAQEDVKCGRLFCTYIYDINLCRYDYSANGMVAQGTKCADGKV
type: DOMAIN
name: ADAM_Cys-rich
description: ADAM, cysteine-rich domain

phrase: EVVYPRKVTAVPKGAVQQKYEDAMQYEFKVNGEPVVLHLEKNKELFSEDYSETHYSPDGREITTYPSVEDHCYYHGRI
type: DOMAIN
name: Peptidase_M12B_N
description: Peptidase M12B, propeptide

phrase: RYVKLAIVADHRMYTKHKKNLKPWVFQMVNSVHQIYRSMNVLIALVYLNIWKKNDKITAQSASNVTLDLFGNWRETVLLKRKRHDCAQLLTAIDFDGPTIGRAHVSSVCDPKRSTGIVQNYTEINLVNAVIMAHELGHNLGMDHDGNQCNCHACIMSAVINNPPSERFSGCSMGYYQTFLTAYNPQCIL
type: DOMAIN
name: Reprolysin_adamalysin
description: Reprolysin domain, adamalysin-type

phrase: RYVKLAIVADHRMYTKHKKNLKPWVFQMVNSVHQIYRSMNVLIALVYLNIWKKNDKITAQSASNVTLDLFGNWRETVLLKRKRHDCAQLLTAIDFDGPTIGRAHVSSVCDPKRSTGIVQNYTEINLVNAVIMAHELGHNLGMDHDGNQCNCHACIMSAVINNPPSERFSGCSMGYYQTFLTAYNPQCILNA
type: DOMAIN
name: Peptidase_M12B
description: Peptidase M12B, ADAM/reprolysin

phrase: CESGECCEQCRFKKAGAVC
type: CONSERVED_SITE
name: Disintegrin_CS
description: Disintegrin, conserved site

phrase: EEGEECDCGSPENCQYQCCNATTCKLHSWVECESGECCEQCRFKKAGAVCRAARTECDIPENCTDQSADCPTDSF
type: DOMAIN
name: Disintegrin_dom
description: Disintegrin domain

phrase: RNGQPCLYNHGYCYNGNCPVMHYQCYGLFGPNATVGQDGCFDANDRGDEYFYCRKENEKYIPCAQEDVKCGRLFCTYIYDINLCRYDYSANGMVAQGTKCADGKVCNSNRQCAD
type: DOMAIN
name: ADAM_Cys-rich
description: ADAM, cysteine-rich domain

phrase: CESGECCEQCRFKKAGAVC
type: DOMAIN
name: Disintegrin_dom
description: Disintegrin domain

phrase: ENCTDQSADCPT
type: DOMAIN
name: Disintegrin_dom
description: Disintegrin domain

phrase: EEGEECDCGSPENCQYQCCNATTCKLHSWVECESGECCEQCRFKKAGAVCRAARTECDIPENCTDQSADCPT
type: DOMAIN
name: Disintegrin_dom
description: Disintegrin domain

phrase: PPVCGNELLEEGEECDCGSPENCQYQCCNATTCKLHSWVECESGECCEQCRFKKAGAVCRAARTECDIPENCTDQSADCPTDSFHR
type: DOMAIN
name: Disintegrin_dom
description: Disintegrin domain

phrase: RYVKLAIVADHRMYTKHKKNLKPWVFQMVNSVHQIYRSMNVLIALVYLNIWKKNDKITAQSASNVTLDLFGNWRETVLLKRKRHDCAQLLTAIDFDGPTIGRAHVSSVCDPKRSTGIVQNYTEINLVNAVIMAHELGHNLGMDHDGNQCNCHACIMSAVINNPPSERFSGCSMGYYQTFLTAYNPQCIL
type: DOMAIN
name: Peptidase_M12B
description: Peptidase M12B, ADAM/reprolysin
Protein sequence:
MIMFLPLGRISLGILILFLTGGNLVSVSEEIQDRMHAVAVLSPKESTDLSLPTRKRQLLDATETGRRWPLRRRRSILFPNGVRICPSDTVAEAVANHVKYFKARVCQEAIWEAFRTFWDRLPGREEYQYWMNLCEDGVTSVFEMGTQFSQSVEHRHLIMEKLTYTKEAESSSCKDQACGPELSSPVPIGETSTLAGAVSSASYPGAASERSAASPQESISNEIENVTEQPTPPAAEQIAEFSIQLLGKQYSEELRDPSSALYRLLVEEFISEVEKAFTGLPGYKGIHVLDFRSPKENGSGIDVHYAVTFNGEAISNTTWDLISLHSNKVENHGLVELDDKPTAVYTISNFRDYIAETLHQNFLMGNSSLNPDPKSLQLINVRGVLLPQTEEIVWNTQSSSLQVTTSSILDNTLQAEWLSADESITTTTTTTISPFGFSSGPPSATGRELHSESTLGDIVSTPKLASPSKVVLSSSPEVLGGSSLTLHSVTPAVLQIDLPVAPEGRTSGSSILEDDNTEESEDVSIDVLPSSSLIQPVPKETVPPMEDSDMILLTSSPHLTSSVIEDLAKDITTPSGLDSLASRVSDKLDVSPWFPDTSVEKEFIFESGLGSGSGKNVDVIDWPWSETSLEKTTEPLSKSWSEEQDTLLPTESIEKLHMYFTEQMIEPSAHRYGDGPIYFTEEESHVRSTIPIFAESATQPTSLISSKHTSDVPDIDSYSVTKAPFLLATIANTASTKETDEVNTLLKKGMVQTEPSSPKGLDSKISVA

Annotated regions:
phrase: AEQIAEFSIQLLGKQYSEELRDPSSALYRLLVEEFISEVEKAFTGLPGYKGIHVLDFRSPKENGSGIDVHYAVTFNGEAISNTTWDLISLHSNKVENHGLVELDDKPTAV
type: DOMAIN
name: SEA_dom
description: SEA domain

phrase: EFSIQLLGKQYSEELRDPSSALYRLLVEEFISEVEKAFTGLPGYKGIHVLDFRSPKENGSGIDVHYAVTFNG
type: DOMAIN
name: SEA_dom
description: SEA domain

phrase: AEQIAEFSIQLLGKQYSEELRDPSSALYRLLVEEFISEVEKAFTGLPGYKGIHVLDFRSPKENGSGIDVHYAVTFNGEAISNTTWDLISLHSNKVENHGLVELDDKPTAVYTIS
type: DOMAIN
name: SEA_dom
description: SEA domain
Protein sequence:
MSNVPADLKYTEEHEWIRTEADGTLTVGITDHAQSTLGDIVFLELPEVGKQVTAGDAVGVVESVKAASDIYSPVSGEIVEINSAIVDTPDSVNSDAYASWLFKIKLADGASTDKLIDAAAYGKLID

Annotated regions:
phrase: GKQVTAGDAVGVVESVKAASDIYSPVSGE
type: BINDING_SITE
name: 2-oxoA_DH_lipoyl-BS
description: 2-oxo acid dehydrogenase, lipoyl-binding site

phrase: TLTVGITDHAQSTLGDIVFLELPEVGKQVTAGDAVGVVESVKAASDIYSPVSGEIVEINSAIVDTPDSVNSDAYASWLFKI
type: DOMAIN
name: Biotin_lipoyl
description: Biotin/lipoyl attachment
Protein sequence:
MAAVVEVEVGGGALAERELDEVDMSDLSPEEQWRVEHARMHAKHRGHEAMHAEMVLILIATLVVAQLLLVQWKQRHPRSYNMVTLFQMWVVPLYFTVKLHWWRFLVIWIFFSAVTAFVTFRATRKPLVQTTPRLVYKWFLLIYKISYATGIVGYMAVMFTLFGLNLLFKIKPEDAMDFGISLLFYGLYYGVLERDFAEMCADYMASTIGFYSESGMPTKHLSDSVCAVCGQQIFVDVNEEGIIENTYRLSCNHVFHEFCIRGWCIVGKKQTCPYCKEKVDLKRMFSNPWERPHVMYGQLLDWLRYLVAWQPVIIGLVQGISYILGLE

Annotated regions:
phrase: CAVCGQQIFVDVNEEGIIENTYRLSCNHVFHEFCIRGWCIVGKKQTCPYC
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: CAVCGQQIFVDVNEEGIIENTYRLSCNHVFHEFCIRGWCIVGKKQTCPY
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type
Protein sequence:
MIILDNRFVTPLSIEEDIDIEYNLRPTQLEEYIGQSKVREKLRIFIKAAKNRGESLDHVLLYGPPGLGKTTLANIIAKEMKGNLKITSGPAIERAGDLAAILTTLNEHDVLFIDEIHRLNRAVEEILYPAMEDYALDIVIGKGAAAKSIRLDLPHFTLIGATTRVGLLTAPLRDRFGVLCPMEFYNEEELKDIIVRSSKILNVKTEEEAAYELARRSRGTPRIANRILKRVRDYSEVMGDGIIDLNMTNKALNLLEIDKEGFDSIDTKILKAILDNFNGGPVGLETLAYFIGEELDTIEDVYEPYLLQKGFIMRTPRGRVATEKTYKHFKREIKKENINQYKFKI

Annotated regions:
phrase: KEGFDSIDTKILKAILDNFNGGPVGLETLAYFIGEELDTIEDVYEPYLLQKGFIMRTPRGRVATEKTYKHF
type: DOMAIN
name: RuvB_C
description: RuvB C-terminal winged helix domain

phrase: SLDHVLLYGPPGLGKTTLANIIAKEMKGNLKITSGPAIERAGDLAAILTTLNEHDVLFIDEIHRLNRAVEEILYPAMEDYALDIVIGKGAAAKSIRLDLPHFTLIGATTRVGLLTAPLRDRFGVLCPMEFY
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: YNEEELKDIIVRSSKILNVKTEEEAAYELARRSRGTPRIANRILKRVRDYSEVMGDGIIDLNMTNKALNLLEI
type: DOMAIN
name: AAA_lid_4
description: RuvB, AAA lid domain

phrase: LRPTQLEEYIGQSKVREKLRIFIKAAKNRGESLDHVLLYGPPGLGKTTLANIIAKEMKGNLKITSGPAIERAGDLAAILTTLNEHDVLFIDEIHRLNRAVEEILYPAMEDYALDIVIGKGAAAKSIRLDLPHFTLIGATTRVGLLTAPLRDRFGVL
type: DOMAIN
name: RuvB-like_N
description: RuvB-like P-loop domain
Protein sequence:
MSVSANAAQAHAQPSAVLRPVMILAGGTGGHIFPGLAVAKVLRARGVPVTWLGADGAMETRLVPQHDIPIDTLAISGLRGKGVVKLLGAPVRVMRAVRAAGFVLRKRQPRAVISFGGFAAGPGGLAARLLGAPLLVHEQNRAPGMTNKVLSRFARRVLTGFPGSFVGEEAVGNPVRAEIAALPAPADRLFGRTGPVRVLVLGGSQGARVLNQALPAALVALGHSEVEVRHQCGEKLRAEAEAAYAQAGVNASVEPFIADMAAAYAWADLVVCRAGASTLAELCAAGVGSVLVPFAAAVDDHQTRNAEYLVGANAAVLLKQDDSLPVRLQQVLQTLLADPARRLSMANAARTLAKPDAAERIADIILQEAGNGPSGMGNGHSSEQPQERTLMHADKRTDQVSVAAGAQLHTIPDSRFPIRTSTGGAR

Annotated regions:
phrase: VLVLGGSQGARVLNQALPAALVALGHSEVEVRHQCGEKLRAEAEAAYAQAGVNASVEPFIADMAAAYAWADLVVCRAGASTLAELCAAGVGSVLVPFAAAVDDHQTRNAEYLVGANAAVLLKQDDSLPVRLQQVLQTLLADPARRLSMANAARTLAKPDAAER
type: DOMAIN
name: Glyco_trans_28_C
description: Glycosyl transferase, family 28, C-terminal

phrase: VMILAGGTGGHIFPGLAVAKVLRARGVPVTWLGADGAMETRLVPQHDIPIDTLAISGLRGKGVVKLLGAPVRVMRAVRAAGFVLRKRQPRAVISFGGFAAGPGGLAARLLGAPLLVHEQNRAPGMTNKVLSRFARRV
type: DOMAIN
name: GlycoTrans_28_N
description: Glycosyltransferase family 28, N-terminal domain
Protein sequence:
MSRIGIFYGSSSGVTGKVAEKLAELLGEERCDLYNMEEDFVDFDDMLKYDHLLFGCSTWGSGEVQNDWRDPLLELDNEKPDFSGKTIALFGAGDYVSHGEQFVSALGVLYDKFKARGAALVGSFPTDGYTYEYSFAVRDGKFVGLPFDKINEVDKTDERLERWIAVLQEEFLPA

Annotated regions:
phrase: IFYGSSSGVTGKVAEKLAELLGEERCDLYNMEEDFVDFDDMLKYDHLLFGCSTWGSGEVQNDWRDPLLELDNEKPDFSGKTIALFGAGDYVSHGEQFVSALGVLYDKFKARGAALVGSFPTDGYTYE
type: DOMAIN
name: Flavodoxin/NO_synth
description: Flavodoxin/nitric oxide synthase

phrase: IGIFYGSSSGVTGKVAEKLAELLGEERCDLYNMEEDFVDFDDMLKYDHLLFGCSTWGSGEVQNDWRDPLLELDNEKPDFSGKTIALFGAGDYVSHGEQFVSALGVLYDKFKARGAALVGSFPTDGYTYEYSFAVRDGKFVGLPFDKINEVDKTDERLERWIAVL
type: DOMAIN
name: Flavodoxin/NO_synth
description: Flavodoxin/nitric oxide synthase

phrase: IFYGSSSGVTGKVAEK
type: CONSERVED_SITE
name: Flavodoxin_CS
description: Flavodoxin, conserved site
Protein sequence:
MQIYKVGGAVRDRLLGRPVSEVDWVVVGASAEQMLELGYRPVGADFPVFLHPQTGEEYALARTERKSGRGYGGFTFHASPEVTLEEDLIRRDLSVNAMAEDEQGKLIDPYGGQQDLAARILRHVSPAFAEDPLRVLRVARFAARYAPLGFHVADETLGLMRQLAESGELAHLTAERSWKEISRALMEPRPDVFIQVLRDCGALAALLPEVDDLFGVPQPEAHHPEIDTGVHVLSVLRQCAEHDQPLSVRWACLLHDVGKGLTPEAEWPRHIAHEHKGLRLIQAINERCKAPRDCAELAMLVGEFHTHGHRALELRPSTLLELLQRFDVFRRPQRFAEFVAACEMDARGRHGLEQRQYPQAAYLLGAAEAARQVPVKPLLEKGLKGAELGEALNRERLRALKAYKAQHAPS

Annotated regions:
phrase: YKVGGAVRDRLLGRPVSEVDWVVVGASAEQMLELGYRPVGADFPVFLHPQTGEEYALARTERKSGRGYGGFTFHASPEVTLEEDLIRRDLSVNAMAEDEQGKLIDPYGGQQDLAARIL
type: DOMAIN
name: PolA_pol_head_dom
description: Poly A polymerase, head domain

phrase: MQIYKVGGAVRDRLLGRPVSEVDWVVVGASAEQMLELGYRPVGADFPVFLHPQTGEEYALARTERKSGRGYGGFTFHASPEVTLEEDLIRRDLSVNAMAEDEQGKLIDPYGGQQDLA
type: DOMAIN
name: PolA_pol_head_dom
description: Poly A polymerase, head domain

phrase: GFHVADETLGLMRQLAESGELAHLTAERSWKEISRALMEPRPDVFIQVLRDCGALAALLPEVD
type: DOMAIN
name: PolyA_RNA-bd
description: tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain

phrase: HVLSVLRQCAEHDQPLSVRWACLLHDVGKGLTPEAEWPRHIAHEHKGLRLIQAINERCKAPRDCAELAMLVGEFHTHGHRALELRPSTLLELLQRFD
type: DOMAIN
name: HD_domain
description: HD domain

phrase: DTGVHVLSVLRQCAEHDQPLSVRWACLLHDVGKGLTPEAEWPRHIAHEHKGLRLIQA
type: DOMAIN
name: HD/PDEase_dom
description: HD/PDEase domain

phrase: TGVHVLSVLRQCAEHDQPLSVRWACLLHDVGKGLTPEAEWPRHIAHEHKGLRLIQAINERCKAPRDCAELAMLVGEFHTHGHRALELRPSTLLELLQRFDV
type: DOMAIN
name: HD_domain
description: HD domain
Protein sequence:
MSTGAQSKAVVAGQHADGPRLLADVGGTNARFALETGPGEITQIRVYPGADYPTITDAIRKYLKDVKISRVNHAAIAIANPVDGDQVTMTNHDWSFSIEATRRALGFDTLLVVNDFTALAMALPGLTDAQRVQVGGGARRQNSVIGLLGPGTGLGVSGLIPADDRWIALGSEGGHASFAPQDEREDLVLQYARKKFPHVSFERVCAGPGMEIIYRALAARDKKRVAATVDTVEIVERAHAGDALALETVECFCGILGAFAGSVALTLGALGGVYIGGGVALKLGELFTRSSFRARFEAKGRFTHYLENIPTYLITAEYPAFLGVSAILAEQLSNRSGGASSAVFERIRQMRDALTPAERRVADLALNHPRSIINDPIVDIARKADVSQPTVIRFCRSLGCQGLSDFKLKLATGLTGTIPMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFEHVENAIEILNGARRIEFYGLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRVLDVAMQAGAKVIAITSSNTPLAKRATVALETDHIEMRESQLSMISRILHLLMIDILAVGVAIRRASTNGELPEAVAQAKARASDDETADVLDWLSHGASPAAKDVARD

Annotated regions:
phrase: FERIRQMRDALTPAERRVADLALNHPRSIINDPIVDIARKADVSQPTVIRFCRSLGCQGLSDFKLKLA
type: DOMAIN
name: HTH_RpiR
description: Helix-turn-helix protein RpiR

phrase: EHVENAIEILNGARRIEFYGLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRVLDVAMQAGAKVIAITSSNTPLAKRATVALETDHIEMRESQLSMISRILHLLMIDILAV
type: DOMAIN
name: RpiR-like_SIS
description: RpiR-like, SIS domain

phrase: LNGARRIEFYGLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRVLDVAMQAGAKVIAITSSNTPLAKRATVALETDHIEMRESQLSMISRILHLLMIDILA
type: DOMAIN
name: SIS_dom
description: SIS domain

phrase: SAVFERIRQMRDALTPAERRVADLALNHPRSIINDPIVDIARKADVSQPTVIRFCRSLGCQGLSDFKLKLATGLTG
type: DOMAIN
name: HTH_RpiR
description: Helix-turn-helix protein RpiR

phrase: AIEILNGARRIEFYGLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRVLDVAMQAGAKVIAITSSNTPLAKRATVALETDHIEMRESQLSMISRILHLLMIDILAVGVAIRRA
type: DOMAIN
name: SIS_dom
description: SIS domain
Protein sequence:
MAERVSLVFHNKMIDGTAIKRLISRLIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKRWLVQDAEQQSFILEKHYHYGNVHAIEKLRQSIEIWYATSEYLRQEMNPNFRMTEPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTVRGISVSPQNQNRMMSERVFSQTLIGRVLADDIYMGQRSIAIRNQDIGIGLVNRLITLRTQAISIRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLDVIIEGEDIMHNVTIPPKSFLLVQNDQYVESEQVIAEIRAGAYTLNFKERVRKHIYSDSEGEMHWSTDVYHAPEFTYSNVHLLPKTSHLWILSGGSRRSSVVSFSLHKDQDQMNIHSLSVERREISSLSLSVNNDQTGHKFFSSDFSAKKKGRILEMSDYSGFNRIISTGHCNLIHPAILHANSDLLAKRQRNGFLIPFHSIQEQEKELMPHSGISIEIPVRGIFRRNSILAYFDDPRYRRKSSGITKWGTLGAHSIVKKEDLIEYRGLKKIKPKYQMKIDRLFFIPEEVHIFPESSYLMVRNNSIIGVDTQITLNIRSRVGGLVRMERKRGGVELKIFSGDIHFPGEIDKISRHSGILIPPESEKTKLKEATKESKKLKKWIYVQRITPTKKKSFVLVRPVVTYEIANGINLATLFPQDPLREKDNMQFRVVNYVLYGKGKAAGGISDTSLQLVRTCLVLNWDQDNKSSSVEEVCASFVEVRTNGLIRNFLRINLVKSNISYLRKRDHPSGSGLISDNGSARTNSNPFYSVFGKAGVEQSLRQNQGTIRTLLNKNKECQVLIILSSSNYFRMGPLNDVKYHNVIKQSIPIQKDSLTPIKTSLGPLGTFLQIANFYSFYYLITHNHISVTKYLKLDNLKQPFQVLKYYLMDETGEIYNPDTDSKILLNPFNLNWYFLQPNYCEEMSPIISLGQFLCENVRITKRGPYLKSGQVLIVQVNSVVIRSAKPYLATPGATVHGHYGAILYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLDSISMNLEKRVEGWNASITRILGIPWGFLIGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSEDGMSNIFLPGELIGLLRAERMGRALEEVICYRAILLGITRASLNTQSFISEASFQETTRVLAKAALRGRIDWLKGLKENVVLGGIIPVGTGFKGLVHCSRQHNNILLERQKGNLFGGEMRDIFLHHRELFDSCISTTFHDTSEHNCLEGLMSPRSEFF

Annotated regions:
phrase: TIVQSRISLVNKIQKVYRSQGVQIHNRHIEIIVRQITSKVLVSEDGMSNIFLPGELIGLLRAERMGRALEEVICYRAILLGITR
type: DOMAIN
name: RNA_pol_Rpb1_5
description: RNA polymerase Rpb1, domain 5

phrase: GLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIIVRRTDCGTVRGISVSPQNQNRMMSERVFSQTLIGRVLADDIYMGQRSIAIRNQDIGIGLVNRLITLRTQAISIRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAPSNGKIK
type: DOMAIN
name: RNA_pol_Rpb1_5
description: RNA polymerase Rpb1, domain 5

phrase: IEKLRQSIEIWYATSEYLRQEMNPNFRMTEPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDP
type: DOMAIN
name: RNA_pol_Rpb1_4
description: RNA polymerase Rpb1, domain 4
Protein sequence:
MQGAGSRGAWIHSPSHCPGNGHGSPPAVAPQRRRLTRRPGYMRSTASPGIGFLSPAVGMPRPISAGLTGQEFYPSQSKARQCSLDLRSHCQDSLVGNPFLKGSLGPAVTSVGHLHPAQGSMRERMVHSGVHSGNDRRQSERLTGDSGCRQEFLSSDSSKSLASSLDVAWSKGSRGLKTVRPLVSPASNGPVDIPSLPGFQDTFTSNFSFIRLSLGAAGERGEAEGCLPSREAEPLHQSPQEMAAEGSGSDRPHGEPRHLWTFSLHAAPGLVDLAQGTRSNRQPECGMVSSSDAGFSSQDASPAGGRSDQDGGWADAHGWHALLREWEPMLQDYLLSNRRQLEVTSLILKLQKLQEKAVEDGDYDMAETLRQRLEDLEQEKGRLPWALPSQQPALRSFLGYLATQTHAALHGAPQRAGSDDPEAPLEGQRRTTAQDSLPGLAVTRRDWLMREKEQLQKEIEALRARVSVLEAKEQRLSQELEDQEMLLRWQGCDQMALVAQLSPGQLQEVSKALGETLTSARWAPFRVEPPETLRSLRERTKSLDLAVRELTEQVCSGEKLCSSLRKRLADLDTRLPALLEAKMLALSGSCFSTAKELAEEIWAVSSEREGLEMFLGRLLALSSRNTRRLGSVKEDYLRCRQDLALQEAAHKTRVKANTVKCTEVLEGQLSCCRCPLLERVWKADLEACQLLMQSLEIQEAGSSSHVEDEKQVHSTGEAAQTAALAVPRTPHPEEEKSPLQVLCEWNTYSASLPHCAAGLWKEESHVVFAEVGDKCEAIGMRLLHLEDQLLGAMHGHDEALFQSLQGELQMVKETLQTMFLQLQPAKEAGGEASASYSTAGAQEAED

Annotated regions:
Protein sequence:
MTKENLENELKTLPNSAGVYQYFNQEGKLLYVGKAKNLKNRVKSYFAFTPNLHANPRNSLRIQKMIEETVHLEFITTNSEADALILENSFIKQLHPKYNILLRDDKTYPYIYVNFEEEFPRFEITRKLVKKSKIKYFGPFFKGARELLDALYLYYPLKQKASCKSPCIFYQISRCLAPCDKRISKEKYLEILDEAMHALLNPSILIKNLEKQMLVLAQNENYEEAAKVRDQIVTIKDLEVKVEMDVAKLEDFEVFALAFEDSMLSTLRFVVQNGKIISANSKITPIKNDIQWDQNEIYKQLILENFSMDIPLLANVIYVYEEFEDRVLLEEILSQRFDKKISIKIPKIGEKRRICDLAFQNALLNIEKEQKNHDFTIQKELKFYFELENLPNDIEIFDNSHLQGVANVGAMVTYRINSWDKSKYRKFHLKHKNDYDQMREVLTRRALDFDKIPPPDLWLIDGGKVLLDLAKKIIVSSGANVDILAISKEKIDAKAHRAKGGAKDKIHSLKGEFSLSINDKKLQFLQKLRDEAHRFAISFHQNTKKKQDLKSSKLANLGLSSGVIQKLLAYYGNFESIYKADFKDLTMLVGRKAAQKIKEN

Annotated regions:
phrase: VFALAFEDSMLSTLRFVVQNGKIISANSKITPIKNDIQWDQNEIYKQLILENFSMDIPLLANVIYVYEEFEDRVLLEEILSQRFDKKISIKIPKIGEKRRICDLAFQNALLNIEKEQKNHDFTIQKELKFYFELENLPNDIEIFDNSHLQGVANVGAMVTYRINSWDKSKYRKFHLKHKNDYDQMREVLTRRALDFDKIPPPDLWLIDGGKVLLDLAKKI
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: FELENLPNDIEIFDNSHLQGVANVGAMVTYRINSWDKSKYRKFHLKHKNDYDQMREVLTRRALDFDKIPPPDLWLIDGGKVLLDLAKKIIVSSGANVDILAISKEKIDAKAHRAKGGAKDKIHSLKGEFSLSINDKKLQFLQKLRDEAHRFA
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: LPNSAGVYQYFNQEGKLLYVGKAKNLKNRVKSYFAFTPNLHANPRNSLRIQKMIEETVHLEFITTNSEADALILENSFIKQLHPKYN
type: DOMAIN
name: GIY-YIG_UvrC_Cho
description: UvrC/Cho-like, GIY-YIG domain

phrase: LIKNLEKQMLVLAQNENYEEAAKVRDQIVTI
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: AGVYQYFNQEGKLLYVGKAKNLKNRVKSYFAFTPNLHANPRNSLRIQKMIEETVHLEFITTNSEADALILENSFIKQLHPKY
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: SILIKNLEKQMLVLAQNENYEEAAKVRDQIVTIKD
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: SAGVYQYFNQEGKLLYVGKAKNLKNRVKSYFAFTPNLHANPRNSLRIQKMIEETVHLEFITTNSEADALILENSFIKQLHPKYNILLR
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: NSAGVYQYFNQEGKLLYVGKAKNLKNRVKSYFAFTPNLHANPRNSLRIQKMIEETVHLEFITTNSEADALILENSFIKQLHPKYN
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease