nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MIETDRLIVPTAVGPQEEQIERALRPRTLAEYVGQAKAREQLEIFIHAARKRSEALDHVLLFGPPGLGKTTLAHIIAREMGVNLRQTSGPVLERAGDLAALLTNLEPHDVLFIDEIHRLSPVVEEVLYPALEDFQIDIMIGEGPAARSVKLDLPPFTLVGATTRAGMLTNPLRDRFGIVARLEFYSAEELGYIVHRSAGLLQMNLDEAGALEIARRSRGTPRIANRLLRRVRDYAEVKAGGEATGAVADAALVMLDVDRAGLDVMDRKLLGAVVEKFMGGPVGLDNLAAAIGEERDTIEDVLEPYLIQQGYLQRTPRGRVATPLAYRHLGIATPASDAELF

Annotated regions:
phrase: LRPRTLAEYVGQAKAREQLEIFIHAARKRSEALDHVLLFGPPGLGKTTLAHIIAREMGVNLRQTSGPVLERAGDLAALLTNLEPHDVLFIDEIHRLSPVVEEVLYPALEDFQIDIMIGEGPAARSVKLDLPPFTLVGATTRAGMLTNPLRDRFGIVAR
type: DOMAIN
name: RuvB-like_N
description: RuvB-like P-loop domain

phrase: ALDHVLLFGPPGLGKTTLAHIIAREMGVNLRQTSGPVLERAGDLAALLTNLEPHDVLFIDEIHRLSPVVEEVLYPALEDFQIDIMIGEGPAARSVKLDLPPFTLVGATTRAGMLTNPLRDRFGIVAR
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: YSAEELGYIVHRSAGLLQMNLDEAGALEIARRSRGTPRIANRLLRRVRDYAEVKAGGEATGAVADAALVMLDV
type: DOMAIN
name: AAA_lid_4
description: RuvB, AAA lid domain

phrase: AGLDVMDRKLLGAVVEKFMGGPVGLDNLAAAIGEERDTIEDVLEPYLIQQGYLQRTPRGRVATPLAYRH
type: DOMAIN
name: RuvB_C
description: RuvB C-terminal winged helix domain
Protein sequence:
MSELSYLEKLMDGVEVEWLPLSKVFNLRNGYTPSKTKKEFWANGDIPWFRMDDIRENGRILGSSLQKISSCAVKGGKLFPENSILISTSATIGEHALITVPHLANQRFTCLALKESYADCFDIKFLFYYCFSLAEWCRKNTTMSSFASVDMDGFKKFLIPRPCPDNPEKSLAIQSEIVRILDKFSALTAELTAELTAELSMRKKQYNYYRDQLLSFKEDEVEGKRKTLGEIMKMRAGQHISAHNIIERKEESYIYPCFGGNGIRGYVKEKSHDGEHLLIGRQGALCGNVQRMKGQFYATEHAVVVSVMPGINIDWAFHMLTAMNLNQYASKSAQPGLAVGKLQELKLFVPSIERQIYIAAILDKFDTLTNSITEVSRVKSSCARNSTNIIEICYLVSRSRK

Annotated regions:
phrase: KRKTLGEIMKMRAGQHISAHNIIERKEESYIYPCFGGNGIRGYVKEKSHDGEHLLIGRQGALCGNVQRMKGQFYATEHAVVVSVMPGINIDWAFHMLTAMNLNQYASKSAQPGLAVGKLQELKLFVPSIERQIYIAAILDKFDTLTNSIT
type: DOMAIN
name: Restrct_endonuc_typeI_TRD
description: Type I restriction modification DNA specificity domain

phrase: VEWLPLSKVFNLRNGYTPSKTKKEFWANGDIPWFRMDDIRENGRILGSSLQKISSCAVKGGKLFPENSILISTSATIGEHALITVPHLANQRFTCLALKESYADCFDIKFLFYYCFSLAEWCRKNTTMSSFASVDMDGFKKFLIPRPCPDNPEKSLAIQSEIVRILDKFSALTAELTAELTAE
type: DOMAIN
name: Restrct_endonuc_typeI_TRD
description: Type I restriction modification DNA specificity domain
Protein sequence:
MADSSVNPPQTPSASMARPGSGPAAKPFRNPGTTKHIFVTGGVVSSLGKGLTASSLGMLLKNRGLRVTMQKLDPYLNVDPGTMNPFQHGEVFVTEDGAETDLDIGHYERFLDENLSADSNVTTGQVYSGVIAKERRGEYLGDTVQVIPHITNAIKESMRAQASDDVDVIITEIGGTVGDIESQPFLEAARQVRQDVGRDSVFFVHVSLVPFIGPSQELKTKPTQHSVAALRSIGIQPDAIVLRADRALPTSVKSKIASMCDVDLDAVVTCPDAPSIYDIPHVLHDEGLDAFAIRRLDLLSHDVDWSTWDSLLERVHHPEYEVTVGLVGKYVDLPDAYLSVTEALRAGGFHHSTKVRIAWIESDACQSPDGAQAALKDVDAIVVPGGFGIRGVDGKVGALRYAREKGLPALGLCLGMQCMVIEYARTELGWEDAQSSEFEPETAHPVIATMAEQADIVSGEGDLGGTMRLGAYDHELVPGSLAARTYGSTRVSERHRHRYEVNNTYRSELEDAGLVISGVSADRSLVEFVELPAEVHPFYVGTQAHPELKSRPTRSHPLFAGLVGAAVELQKSTRLLEVRADHSEHSGEEPAVAAGARTPAGEGTEDEAEDRA

Annotated regions:
phrase: VTVGLVGKYVDLPDAYLSVTEALRAGGFHHSTKVRIAWIESDACQSPDGAQAALKDVDAIVVPGGFGIRGVDGKVGALRYAREKGLPALGLCLGMQCMVIEYARTELGWEDAQSSEFEPETAHPVIATMAEQADIVSGEGDLGGTMRLGAYDHELVPGSLAARTYGSTRVSERHRHRYEVNNTYRSELEDAGLVISGVSADRSLVEFVELPAEVHPFYVGTQAHPELKSRPTRSHPLFAGL
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain

phrase: KHIFVTGGVVSSLGKGLTASSLGMLLKNRGLRVTMQKLDPYLNVDPGTMNPFQHGEVFVTEDGAETDLDIGHYERFLDENLSADSNVTTGQVYSGVIAKERRGEYLGDTVQVIPHITNAIKESMRAQASDDVDVIITEIGGTVGDIESQPFLEAARQVRQDVGRDSVFFVHVSLVPFIGPSQELKTKPTQHSVAALRSIGIQPDAIVLRADRALPTSVKSKIASMCDVDLDAVVTCPDAPSIYDIPHVLHDEGLDAFAIRRLD
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: LPDAYLSVTEALRAGGFHHSTKVRIAWIESDACQSPDGAQAALKDVDAIVVPGGFGIRGVDGKVGALRYAREKGLPALGLCLGMQCMVIEYARTELGWEDAQSSEFEPETAHPVIATMAEQADIVSGEGDLGGTMRLGAYDHELVPGSLAARTYGSTRVSERHRHRYEVNNTYRSELEDAGLVISGVSADRSLVEFVELPAEVHPFYVGTQAHPELKSRPTRSHPLFAGL
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: KHIFVTGGVVSSLGKGLTASSLGMLLKNRGLRVTMQKLDPYLNVDPGTMNPFQHGEVFVTEDGAETDLDIGHYERFLDENLSADSNVTTGQVYSGVIAKERRGEYLGDTVQVIPHITNAIKESMRAQASDDVDVIITEIGGTVGDIESQPFLEAARQVRQDVGRDSVFFVHVSLVPFIGPSQELKTKPTQHSVAALRSIGIQPDAIVLRADRALPTSVKSKIASMCDVDLDAVVTCPDAPSIYDIPHVLHDEGLDAFAI
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal
Protein sequence:
MPRRRVVAKREVLPDPKFGSSTLAKFMNHVMISGKKSTAEKIVYGALDIVSEKLNKDPLETFSEALENISPLVEVKSRRVGGATYQVPVEVRPARRTALAMRWLVEYSRNRGEKSMAQRLAGELIDAAQSKGGAVKKREDVHRMAEANKAFSHFRF

Annotated regions:
phrase: SSTLAKFMNHVMISGKKSTAEKIVYG
type: CONSERVED_SITE
name: Ribosomal_uS7_CS
description: Small ribosomal subunit protein uS7, conserved site

phrase: PRRRVVAKREVLPDPKFGSSTLAKFMNHVMISGKKSTAEKIVYGALDIVSEKLNKDPLETFSEALENISPLVEVKSRRVGGATYQVPVEVRPARRTALAMRWLVEYSRNRGEKSMAQRLAGELIDAAQSKGGAVKKREDVHRMAEAN
type: DOMAIN
name: Ribosomal_uS7_dom
description: Small ribosomal subunit protein uS7 domain
Protein sequence:
MLKPIIHKFKYGKHNIILETGVIARQATASVLASMDDTTVLITIVSDNTTIPGQKFFPLVVNYQERTYAAGRIPGGFFRREGRPSENEILISRLIDRPIRPLFPKDFLYEVQIIATVISVNPQINPDIISIIGSSAALCLSGLPFLGPIGAARIGFLNNKYILNPSIEKIKKSSLDLVVSGTKNTIFMVEAEASILSEDNILNAILFGHESQQSLIDNIYLFSDKANKIPNIYKNIYKPDKQIFNLISKKIKKDINKAYYILKKKERLKKLNDIKQKVTSELLNNDSQLTSSKIEESIYFLERNIVRKRILKGKLRIDGRINNEVRKIDVRTGILPRVHGSALFTRGETQALVSATLGTSRDAQNLDDLLGDRTDNFLFHYNFPPYSVGEIGIVGSPKRREIGHGKLAKRSFLAVMPNIEDFPYTIRLVSEITESNGSSSMASVCGASLALMDAGVPIKSAIAGIAMGLIKENDSYIILSDILGDEDYLGDMDFKVSGSRLGITALQMDIKVSGITSDIIRSALYQAKSARLKILDIMENTLQIPRSDISKFAPRIYTIKINPEKIKDVIGKGGSIIRMLTEETGTVIEIKDDGIVKISAINGEKAKYAIKRIQEITEDIQIGKIYSGKVTRILDFGAFVSIGFGKEGLIHISQISNKRIDKVINHLKINQIIFVKVLEVDRQGRIRLSMKNI

Annotated regions:
phrase: FNLISKKIKKDINKAYYILKKKERLKKLNDIKQKVTSELLNNDSQLTSSKIEESIYFLERNIVRKRILKGKLRIDG
type: DOMAIN
name: PNPase_PH_RNA-bd_bac/org-type
description: Polyribonucleotide nucleotidyltransferase, RNA-binding domain

phrase: QIGKIYSGKVTRILDFGAFVSIGFGKEGLIHISQISNKRIDKVINHLKINQIIFVKVLEVDRQGRIRLSM
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: GPIGAARIGFLNNKYILNPSIEKIKKSSLDLVVSGTKNTIFMVEAEASILSEDNILNAILFGH
type: DOMAIN
name: ExoRNase_PH_dom2
description: Exoribonuclease, phosphorolytic domain 2

phrase: QIGKIYSGKVTRILDFGAFVSIGFGKEGLIHISQISNKRIDKVINHLKINQIIFVKVLEVDRQGRIRLSM
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: GKIYSGKVTRILDFGAFVSIGFGKEGLIHISQISNKRIDKVINHLKINQIIFVKVLEVDRQGRIRLSM
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: APRIYTIKINPEKIKDVIGKGGSIIRMLTEETGTVIEIKDDGIVKISAINGEKAKYAIKRIQEIT
type: DOMAIN
name: KH_dom
description: K Homology domain

phrase: YTIKINPEKIKDVIGKGGSIIRMLTEETGTVIEIKDDGIVKISAINGEKAKYAIKRIQ
type: DOMAIN
name: KH_dom_type_1
description: K Homology domain, type 1

phrase: EVRKIDVRTGILPRVHGSALFTRGETQALVSATLGTSRDAQNLDDLLGDRTDNFLFHYNFPPYSVGEIGIVGSPKRREIGHGKLAKRSFLAVMPNIEDFPYTIRLVSEITESNGSSSMASVCGASLALMDAGV
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1

phrase: NIILETGVIARQATASVLASMDDTTVLITIVSDNTTIPGQKFFPLVVNYQERTYAAGRIPGGFFRREGRPSENEILISRLIDRPIRPLFPKDFLYEVQIIATVISVNPQINPDIISIIGSSAALCLSGL
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1
Protein sequence:
MSKNFVVAIVGATGAVGQKIAEKLVERNFPYSDIKLLASKRSAGQQVTLNDTNYTIEEATPEAFEGVNFAFFSAGGDVSRQLAKEAADRGAVVIDNTSAFRMDPDTPLVVPEVNPTALQQHAGIIANPNCSTIQMVCVLEPLRQRAGLKKVIVSTYQAVSGSGAAAIDELKKESRDFLQKEPDPQVLPVKSQPKHYPIAGNLLPQIDVFEENGFTFEEMKMINETKKILSMPELPVAATCVRVPVVTGHSESLYVETEEELSLAEIRDILSSAEGVVLQDNPAQQLYPMPLYAEDTDPVFVGRIRKDLHEKTGIHLWVVSDNLLKGAALNSIQIAEKMVEMQLVSGVSQ

Annotated regions:
phrase: VAATCVRVPVVTGH
type: CONSERVED_SITE
name: Asp-semialdehyde_DH_CS
description: Aspartate-semialdehyde dehydrogenase, conserved site

phrase: VVAIVGATGAVGQKIAEKLVERNFPYSDIKLLASKRSAGQQVTLNDTNYTIEEATPEAFEGVNFAFFSAGGDVSRQLAKEAADRGAVVIDNTSAFRMDPDTPLVVPEVNPTALQQ
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: LEPLRQRAGLKKVIVSTYQAVSGSGAAAIDELKKESRDFLQKEPDPQVLPVKSQPKHYPIAGNLLPQIDVFEENGFTFEEMKMINETKKILSMPELPVAATCVRVPVVTGHSESLYVETEEELSLAEIRDILSSAEGVVLQDNPAQQLYPMPLYAEDTDPVFVGRIRKDLHEKTGIHLWVVSDNLL
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: VAIVGATGAVGQKIAEKLVERNFPYSDIKLLASKRSAGQQVTLNDTNYTIEEATPEAFEGVNFAFFSAGGDVSRQLAKEAADRGAVVIDNTSAFRMDPDTPLVVPEVNPTALQ
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MGVRKIKEKPNVCKKGDKVRVIAGKDKGTEAVVLTALPKVNKVIVEGVNIVKKHQRPTNELPQGGIVEKEAAIHVSNVQVLDKNGVAGRVGYKFVDGKKVRYNKKSGEVLD

Annotated regions:
phrase: GDKVRVIAGKDKGTEAV
type: CONSERVED_SITE
name: Ribosomal_uL24_CS
description: Large ribosomal subunit protein uL24, conserved site

phrase: GDKVRVIAGKDKGTEAVVLTALPKVNKVIVEGVNIVKKHQRPTNELPQGGIVEKEAAIHVSNVQ
type: DOMAIN
name: Ribosomal_uL24_KOW
description: Large ribosomal subunit protein uL24, KOW domain

phrase: KGDKVRVIAGKDKGTEAVVLTALPKVNKVIV
type: DOMAIN
name: KOW
description: KOW

phrase: VCKKGDKVRVIAGKDKGTEAVVLTALP
type: DOMAIN
name: KOW
description: KOW
Protein sequence:
MGQKVHPTGFRLGILKSWDSRWFATKDYAKLVHEDRKIRDYIKARLYHAGIAKVEIERAANKVKIRIFTARPGIVIGKKGAEIETLRRDLERKFKREILIDIQEVRRPELDATLVGENISLQLVRRVAFRRAMKRAVSAALKFGAKGVRVASAGRLGGAEMARREWYREGRVPLHTLRADIDYGTAIARTTYGAIGVKVWIFKGEVLP

Annotated regions:
phrase: ARREWYREGRVPLHTLRADIDYGTAIARTTYGAI
type: CONSERVED_SITE
name: Ribosomal_uS3_CS
description: Small ribosomal subunit protein uS3, conserved site

phrase: IRDYIKARLYHAGIAKVEIERAANKVKIRIFTARPGIVIGKKGAEIETLRRDLERKFKREILIDIQEV
type: DOMAIN
name: KH_dom_type_2
description: K Homology domain, type 2

phrase: AANKVKIRIFTARPGIVIGKKGAEIETLRRDLERKFKREILIDIQEVRRPELDATLVGENISLQL
type: DOMAIN
name: KH_dom
description: K Homology domain

phrase: ISLQLVRRVAFRRAMKRAVSAALKFGAKGVRVASAGRLGGAEMARREWYREGRVPLHTLRADIDYGTAIARTTYGAIGVKVW
type: DOMAIN
name: Ribosomal_uS3_C
description: Small ribosomal subunit protein uS3, C-terminal

phrase: KIRDYIKARLYHAGIAKVEIERAANKVKIRIFTARPGIVIGKKGAEIETLRRDLERKFKREILIDIQEVRRPE
type: DOMAIN
name: KH_dom_type_2
description: K Homology domain, type 2
Protein sequence:
MGANGTLVECKRGESDAVVFRFLIFDAPSPSSVTAYVKLMQKYNVRHIVRACGQTYSAEAFEKQGMVVHGWSFDDGAPPTQTVIDNWLNLLEQEKNKSPPETIAVHCVAGLGRAPILVALALVEYGGMPPLDAVGYVRGRRKGAINQVQLNWLMRYKPRHQEGNEGSLSCAGCAVM

Annotated regions:
phrase: VKLMQKYNVRHIVRACGQTYSAEAFEKQGMVVHGWSFDDGAPPTQTVIDNWLNLLEQEKNKSPPETIAVHCVAGLGRAPILVALALVEYGGMPPLD
type: DOMAIN
name: PTP-SAK
description: Swiss Army Knife protein, DSP-PTPase phosphatase domain

phrase: GESDAVVFRFLIFDAPSPSSVTAYVKLMQKYNVRHIVRACGQTYSAEAFEKQGMVVHGWSFDDGAPPTQTVIDNWLNLLEQEKNKSPPETIAVHCVAGLGRAPILVALALVEYGGMPPLDAVGYVRGRRKGAINQVQLNWLMRYKPRHQEGN
type: DOMAIN
name: TYR_PHOSPHATASE_DUAL_dom
description: Dual specificity protein phosphatase domain

phrase: DNWLNLLEQEKNKSPPETIAVHCVAGLGRAPILVALALVEYGGMPPLDAVGYVRGRRKGAINQVQLN
type: DOMAIN
name: Tyr_Pase_dom
description: Tyrosine-specific protein phosphatases domain
Protein sequence:
MSELFWFEKYRPRSFDEVVDLEEVKARLRQFVKAGNMPHLLFYGPPGTGKTTMALVLARELYGEYWRENTLELNASDERGINVIRERVKEFARTAPVGKAPFKLVILDEADNMTSDAQQALRRIMEIYAQNTRFILLANYVSGIIEPIQSRTVMIRFSPLPKEAVFARLRYIAENEGVKVSDDALEAIYEFTQGDMRRAINALQIAATVSKAVTEEVVAKALGMVSPRLLRETLYEAVKGSFGKAATQIYGFVADGGVGELEIIKQIHREMLRLDVQEYVKPEIAYIIAEAHYAILRGAHGLTQIYGALAKVRRLLKSV

Annotated regions:
phrase: LLFYGPPGTGKTTMALVLARELYGEYWRENTLELNASDERGINVIRERVKEFARTAPVGKAPFKLVILDEADNMTSDAQQALRRIMEIYAQNTRFILLANYVSGIIEPIQSRTVMIR
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: SPRLLRETLYEAVKGSFGKAATQIYGFVADGGVGELEIIKQIHREMLRLDVQEYVKPEIAYIIAEAHYAILRGAHGLTQIYGALA
type: DOMAIN
name: Rep_factorC_C
description: Replication factor C, C-terminal

phrase: NMPHLLFYGPPGTGKTTMALVLARELYGEYWRENTLELNASDERGINVIRERVKEFARTAPVGKAPFKLVILDEADNMTSDAQQALRRIMEIYAQNTRFILLANYVSGIIEPIQSRTVMIRFSPL
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LPKEAVFARLRYIAENEGVKVSDDALEAIYEFTQGDMRRAINALQIAATVSKAVTEEVVA
type: DOMAIN
name: RFC_lid
description: Replication factor C, lid domain
Protein sequence:
EASSSSDDNVCCNGCLCDRRAPPYFECVCVDTFDHCPASCNSCVCTRSNPPQCRCTDKTQGRCPVTECRS

Annotated regions:
phrase: CCNGCLCDRRAPPYFECVCVDTFDHCPASCNSCVCTRSNPPQCRCTDKTQGRC
type: DOMAIN
name: Prot_inh_BBI
description: Proteinase inhibitor I12, Bowman-Birk

phrase: CNSCVCTRSNPPQCRCTDK
type: DOMAIN
name: Prot_inh_BBI
description: Proteinase inhibitor I12, Bowman-Birk

phrase: CVDTFDHCPASCNS
type: DOMAIN
name: Prot_inh_BBI
description: Proteinase inhibitor I12, Bowman-Birk

phrase: CCNGCLCDRRAPPYFECVCVDTFDHCPASCNSCVCTRSNPPQCRCTDKTQGRCPVTE
type: DOMAIN
name: Prot_inh_BBI
description: Proteinase inhibitor I12, Bowman-Birk
Protein sequence:
MLKTKLYGLFAEEIAGALHPFGFEKYRASQVADWIYRRGIIQFEAMTNLSKQQREILAEHFAIDEPRVVEKQQSSDKRTEKFLFALADGATIETVLMRQPYGNSVCISTQVGCAMGCVFCASTLNGIIRDLDCGEMLAQIAYINKLLAIEGQKVDSVVIMGMGEPLANYEQVVRFIRLCRQPYCYEMSYRSFTLSTSGIVPGILKLAAEELPVTLAVSLHAPNDLLRSQLMPINRQYPIASVLQAADYYAQQTGRRVTYEYILIAGMNDSKENAVELAKLLHGRLAHVNLIPINPVPEKGLARPDAKTIAQFEAILRQKQISVTLRREMGTEIQAACGQLRRRVPGRL

Annotated regions:
phrase: LYGLFAEEIAGALHPFGFEKYRASQVADWIYRRGIIQFEAMTNLSKQQREILAEHFA
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: KTKLYGLFAEEIAGALHPFGFEKYRASQVADWIYRRGIIQFEAMTNLSKQQREILAEHFAIDEPRVVEKQQSSDKRTEKFLFALADGATIETVLMRQPYGNSVCISTQVGCAMGCVFCASTLNGIIRDLDCGEMLAQIAYINKLLAIEGQKVDSVVIMGMGEPLANYEQVVRFIRLCRQPYCYEMSYRSFTLSTSGIVPGILKLAAEELPVTLAVSLHAPNDLLRSQLMPINRQYPIASVLQAADYYAQQTGRRVTYEYILIAGMNDSKENAVELAKLLHGRLAHVNLIPINPVPEKGLARPDAKTIAQFEAILRQKQISVTLRREMGTEIQAACGQLRRR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: ISTQVGCAMGCVFCASTLNGIIRDLDCGEMLAQIAYINKLLAIEGQKVDSVVIMGMGEPLANYEQVVRFIRLCRQPYCYEMSYRSFTLSTSGIVPGILKLAAEELPVTLAVSLHAPNDLLRSQLMPINRQYPIASVLQAADYYAQQTGRRVTYEYILIAGMNDSKENAVE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: QPYGNSVCISTQVGCAMGCVFCASTLNGIIRDLDCGEMLAQIAYINKLLAIEGQKVDSVVIMGMGEPLANYEQVVRFIRLCRQPYCYEMSYRSFTLSTSGIVPGILKLAAEELPVTLAVSLHAPNDLLRSQLMPINRQYPIASVLQAADYYAQQTGRRVTYEYILIAGMNDSKENAVELAKLLHGRLAHVNLIPINPVPEKGLARPDAKTIAQFEAILRQKQISVTLRREMGT
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MNKFLKYFLILLALVLIVVPIVFATLLFKTSQDAFESSQDSKNANRQSNLRDNKVNPEEQPISILFLGIDDNDGRRKKGQDAEHSRSDAMILTTFNQSKHQIRMLSIPRDTISYIPKVGYYDKITHAHAYGGPIAAMDSVEATMNVPVDYYVRVNMKAFVEAVNELGGIYYDVPYDLNEPNTDDTGKIKIKKGYQKLNGDEALAVARTRHHDSDLKRGQRQMELIKILFQKAQEVDSIDKLDNVIQIVGKNAKHNLTNSEIKALAKMYLTNDVEIKTAQLKGKDDMLNGIYYYHPSVESIQKYANLLRKDLELSPINDKNDFLDQRVINHYGSLIPLTPLDNSLLRKEQNDTTDKDKTSNENSDSTNNSDSSNQQQPATDQNSNQNQGGTQQAPQASNNQNGVVN

Annotated regions:
phrase: RSDAMILTTFNQSKHQIRMLSIPRDTISYIPKVGYYDKITHAHAYGGPIAAMDSVEATMNVPVDYYVRVNMKAFVEAVNELGGIYYDVPYDLNEPNTDDTGKIKIKKGYQKLNGDEALAVARTRHHDSDLKRGQRQMELIKILFQK
type: DOMAIN
name: LytR_CpsA_psr
description: Cell envelope-related transcriptional attenuator domain

phrase: RSDAMILTTFNQSKHQIRMLSIPRDTISYIPKVGYYDKITHAHAYGGPIAAMDSVEATMNVPVDYYVRVNMKAFVEAVNELGGIYYDVPYDLNEPNTDDTGKIKIKKGYQKLNGDEALAVARTRHHDSDLKRGQRQMELIKILFQKA
type: DOMAIN
name: LytR_CpsA_psr
description: Cell envelope-related transcriptional attenuator domain
Protein sequence:
MPIICKSKCGNRAALKRPKTGDALCKECFFAAFEAEIHHTISSSNLFRRGEKVAVAASGGKDSTVLAHVLKLLNERHNYGLELVLLSIDEGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGWTMDRIVAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNVLRGDTARLRRCTSIRTGGGEDSIPRVKPLKYSYEKEIVMYAHYKKLVYFSTECVFAPNAYRGHARAFLKDLEKVRPSVIMDIIYSGEQLRFKDTVKKPERGTCTRCGFVSSQQPCKACVLLEGLNRGLPKLGIGKKTKGERMIAKQNQELALRERANLVKNDF

Annotated regions:
phrase: GTCTRCGFVSSQQPCKACVLLEGLNRGLPK
type: DOMAIN
name: CTU1_C
description: Cytoplasmic tRNA 2-thiolation protein 1, C-terminal

phrase: CKECFFAAFEAEIHHTISSSNLFRRGEKVAVAASGGK
type: CONSERVED_SITE
name: UPF0021_CS
description: Uncharacterised protein family UPF0021, conserved site

phrase: FEAEIHHTISSSNLFRRGEKVAVAASGGKDSTVLAHVLKLLNERHNYGLELVLLSIDEGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGWTMDRIVAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNVLRGDTARLRRCTSIRTGGGEDSIPRVKPLKYSYEKEIVMYAHYKKLVYFSTECVFAPN
type: DOMAIN
name: CTU1-like_ATP-bd
description: Cytoplasmic tRNA 2-thiolation protein 1-like, ATP-binding domain

phrase: SKCGNRAALKRPKTGDALCKECF
type: DOMAIN
name: TtuA-like_LIM_N
description: 2-thiouridine synthetase TtuA-like, N-terminal LIM domain

phrase: KVAVAASGGKDSTVLAHVLKLLNERHNYGLELVLLSIDEGITGYRDDSLETVKQNRDDYQMPLKILSYEELYGWTMDRIVAQIGRSNNCTFCGVFRRQALDRGAKLLGVDSIATGHNADDIAETVLMNVLRGDTARLRRCTSIRTGGGEDSIPRVKPLKYSYEKEIVMYAHYKKLVYF
type: DOMAIN
name: TilS/TtcA_N
description: tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal
Protein sequence:
LQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTPEELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATSESLRSATHDVLAGLTAREXKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLDD

Annotated regions:
phrase: VLAGLTAREXKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLR
type: DOMAIN
name: RNA_pol_sigma70_r4
description: RNA polymerase sigma-70 region 4

phrase: TLEEVGKQFDVTRERIRQIEAKALRK
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: DLIQEGNIGLMKA
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: DLIQEGNIGLMKA
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: FSTYATWW
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: LTAREXKVLRMR
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: TLEEVGKQFDVTRER
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: IRQIEAKALRK
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: ETINKLNRISRQMLQEMGREPTPEELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPL
type: DOMAIN
name: RNA_pol_sigma70_r3
description: RNA polymerase sigma-70 region 3

phrase: QFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTPEELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATSESLRSATHDVLAGLTAREXKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLR
type: DOMAIN
name: RNA_pol_sigma-70_dom
description: RNA polymerase sigma-70-like domain

phrase: LQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTPEELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATSESLRSATHDVLAGLTAREXKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEVLRSF
type: DOMAIN
name: RNA_pol_sigma_RpoD_C
description: RNA polymerase sigma factor RpoD, C-terminal

phrase: FLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQAR
type: DOMAIN
name: RNA_pol_sigma70_r2
description: RNA polymerase sigma-70 region 2
Protein sequence:
MSYKFNTIEEAIEDIKDGKIIVVVDDEDRENEGDLLMAAEKITPEAINFMAKEGRGLICTPVKKSRLEELEICQMVHKNKDNFGTAFTVSVDAVGTSTGISAFDRAFTVSKIVDLNSKPEDFLKPGHVFPLAAKDGGVLVRAGHTEAAVDMARLSGFSEVGVICEIMNEDGTMARVPQLMEFVKKHNLKIITIADLIEYRSKEEKLIKALEPVKLPSKYGDFIAIGYENLITGEEHIALVKGDVKGEDPVLVRVHSECLTGDVFGSLRCDCGEQIAKALMKIEEEGKGVLVYMRQEGRGIGLLNKLKAYALQDEGMDTIEANLALGFPEDLRDYGIGAQILKDLGIKNIKLMTNNPKKISGLSGYGIKIVDRVPIDMGCKKENRNYLRTKKDKMGHLIDIM

Annotated regions:
phrase: VKLPSKYGDFIAIGYENLITGEEHIALVKGDVKGEDPVLVRVHSECLTGDVFGSLRCDCGEQIAKALMKIEEEGKGVLVYMRQEGRGIGLLNKLKAYALQDEGMDTIEANLALGFPEDLRDYGIGAQILKDLGIKNIKLMTNNPKKISGLSGYGIKIVDRV
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MSDMAKNLILWLIIAVVLMSIFQSFGPNDSNRRKVEYSAFISELNQDQIKETRINGREIFALKKDGSRYVTYIPINDSKLLDILLSKNVKIIGEPPEEPSLLTSIFISWFPMLLLIGVWIFFMRQMQGGGGKGAMSFGKSKAKMLTEDQIKTTFSDVAGCDEAKEEVSELVDYLKEPSRFQKLGGKIPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKTAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEEIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMKAIPLSSDIDAAVIARGTPGFSGADLANLVNEAALFAARKNKKNVSMMEFEKAKDKIMMGAERKSLVMTEKQKEATAYHEAGHAIVGRLVPGHDPVHKVTIIPRGRALGITFFLPKGDVISISRQKLESQISTLYGGRLAEEIIYGLSNVSTGASNDIKVATSIARNMITQWGFSDKLGPLLYSEEEGEIFLGRSVTKSQNISDKTARIIDQEIKILIEKNYLRAKNLIIDNIDILHAMKDALMKYETINAYQIDDLMKRKPVRPPCDNQDSKRHNNKDDIINKSKNNISNNTSVTNNIQ

Annotated regions:
phrase: ILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKTAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEEIIVIAATNRPDVLDPALLRPGRFDRQVVV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: LILWLIIAVVLMSIFQSFGPNDSNRRKVEYSAFISELNQDQIKETRINGREIFALKKDGSRYVTYIPINDSKLLDILLSKNVKIIGEP
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular

phrase: VMTEKQKEATAYHEAGHAIVGRLVPGHDPVHKVTIIPRGRALGITFFLPKGDVISISRQKLESQISTLYGGRLAEEIIYGLSNVSTGASNDIKVATSIARNMITQWGFSDKLGPLLYSEEEGEIFLGRSVTKSQNISDKTARIIDQEIKILIEKNYLRAKNLIIDNIDILHAMKDALMKYETINAYQID
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: DIDAAVIARGTPGFSGADLANLVNEAALFAARKNKKNVSMMEFE
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: IIVIAATNRPDVLDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: IPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKTAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEEIIVIAATNRPDVLDPALLRPGRFDRQVVVGLP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain
Protein sequence:
MSEAGNVASGLGLPGEVSQWSLKRYGRFMLLDNVGSPGPSSEAAAAGSPTWKVFESSEESGSLVLTIVVSGHFFISQGQTLLEGFSLIGSKNWLKIVRRMDCLLFGTTIKNKSRMFRVQFSGESKEEALERCCGCVQTLAQYVTVQEPDSTTQELQQSQGPREAGESQGKDPLQQGPSLTLEQHVCMAAGAGVLQERTSVTHRAQSILAPEKLTLAYEGSSWGTEELGPFLRLCLMDQNFPAFVEEVEKELKKITGLRN

Annotated regions:
Protein sequence:
MEDGVLKEGFLVKRGHIVHNWKARWFILRQNTLLYYKLEGGRRVTPPKGRIVLDGCTITCPCLEYENRPLLIKLKTRTSTEYFLEACSREERDSWAFEITGAIHAGQPGKIQQLHILKNSFKLPPHISLHRIVDKMHDTSTGIRPSPNMEQGSTYKKTFLGSSLVDWLISSNFAASRLEAVTLASMLMEENFLRPVGVRSMGAIRSGDLAEQFLDDSTALYTFAESYKKKVSSKEEISLSTMELSGTVVKQGYLSKQGHKRKNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSLVSALEDNGVPTGVKGNVQGNLFKVITKDDTHYYIQASSKAERAEWIEAIKKLT

Annotated regions:
phrase: SLHRIVDKMHDTSTGIRPSPNMEQGSTYKKTFLGSSLVDWLISSNFAASRLEAVTLASMLMEENFLRPVGVRSMGAIRSGDLAEQFLDDSTALYTFAESYKKKVSSKE
type: DOMAIN
name: PLEK2_DEP
description: Pleckstrin-2, DEP domain

phrase: TSTGIRPSPNMEQGSTYKKTFLGSSLVDWLISSNFAASRLEAVTLASMLMEENFLRPVGVRSMGAIRSGDLAEQFLDDSTALYTFA
type: DOMAIN
name: DEP_dom
description: DEP domain

phrase: TVVKQGYLSKQGHKRKNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSLVSALEDNGVPTGVKGNVQGNLFKVITKDDTHYYIQASSKAERAEWIEAIKKL
type: DOMAIN
name: PH_domain
description: Pleckstrin homology domain

phrase: VLKEGFLVKRGHIVHNWKARWFILRQNTLLYYKLEGGRRVTPPKGRIVLDGCTITCPCLEYENRPLLIKLKTRTSTEYFLEACSREERDSWAFEITGAIHA
type: DOMAIN
name: PH_domain
description: Pleckstrin homology domain

phrase: VVKQGYLSKQGHKRKNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSLVSALEDNGVPTGVKGNVQGNLFKVITKDDTHYYIQASSKAERAEWIEAIKKL
type: DOMAIN
name: PH_domain
description: Pleckstrin homology domain

phrase: TSTGIRPSPNMEQGSTYKKTFLGSSLVDWLISSNFAASRLEAVTLASMLMEENFLRPVGVRSMGAIRSGDLAEQFLDDSTALYTFA
type: DOMAIN
name: DEP_dom
description: DEP domain

phrase: VVKQGYLSKQGHKRKNWKVRRFVLRKDPAFLHYYDPSKEENRPVGGFSLRGSLVSALEDNGVPTGVKGNVQGNLFKVITKDDTHYYIQASSKAERAEWIEAIKK
type: DOMAIN
name: PH_domain
description: Pleckstrin homology domain

phrase: VLKEGFLVKRGHIVHNWKARWFILRQNTLLYYKLEGGRRVTPPKGRIVLDGCTITCPCLEYENRPLLIKLKTRTSTEYFLEACSREERDSWAFE
type: DOMAIN
name: PH_domain
description: Pleckstrin homology domain

phrase: GVLKEGFLVKRGHIVHNWKARWFILRQNTLLYYKLEGGRRVTPPKGRIVLDGCTITCPCLEYENRPLLIKLKTRTSTEYFLEACSREERDSWAFEITGAI
type: DOMAIN
name: PH_domain
description: Pleckstrin homology domain

phrase: RPSPNMEQGSTYKKTFLGSSLVDWLISSNFAASRLEAVTLASMLMEENFLRPVGVRSMGAIRSGDLAEQFLDDSTALYT
type: DOMAIN
name: DEP_dom
description: DEP domain