nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MYVEDTIAAISTAAGEGGVGIVRVSGPDAPSIARRVFRRGSNGDFESHRFYYGSVVDAVTGEAVDEAMAVLMVRPRSYTREDVLEIQCHGGYLVTRRVLELVLAAGARLAEPGEFTRRAFLNGRIDLVQAEAVIDVIRAKTDAALALAQHQRQGRLSQRLDTVMAELRQALALVEAFIDFPEDDIDPAAQDALTVHVRKAAETVGELIAGFDEGRVLREGVAVLIAGKPNVGKSSLLNTLLQEKRAIVTSVPGTTRDIIEEVVNIRGLPLRMIDTAGIRDTEDIVEKEGVRLTLEKIPEADLVLLVIDGSRPLDEDDRMILSALAGKRLILVENKCDLPRAVQIPDELVLMPRVTVSTSRGDGIDELKESIFQTFIHGAAIDSREYVAVSRVRHRDLLSRSTMHLTAFEQGLASGFTLELLAVELRDALAAVGEVTGETTPDDILDVIFDRFCIGK

Annotated regions:
phrase: LVQAEAVIDVIRAKTDAALALAQHQRQGRLSQRLDTVMAELRQALALVEAFIDFPEDDIDPAAQDALTVHVRKAAETVGELIAGFDEGRVLREGVAVLIAGKPNVGKSSLLNTLLQEKRAIVTSVPGTTRDIIEEVVNIRGLPLRMIDTAGIRDTEDIVEKEGVRLTLEKIPEADLVLLVIDGSRPLDEDDRMILSALAGKRLILVENKCDLPRAVQIPDELVLMPRVTVSTSRGDGIDELKESIFQTFIHGAAIDSREYVAVSRVRHRDLLSRSTMHLTAFEQGLASGFTLELLAVELRDALAAVGEVTGETTPDDILDVIFDRF
type: DOMAIN
name: MnmE_helical
description: MnmE, helical domain

phrase: DTIAAISTAAGEGGVGIVRVSGPDAPSIARRVFRRGSNGDFESHRFYYGSVVDAVTGEAVDEAMAVLMVRPRSYTREDVLEIQCHGGYLVTRRVLELVLAAGARLAEPGEFTRRAFLN
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal

phrase: GVAVLIAGKPNVGKSSLLNTLLQEKRAIVTSVPGTTRDIIEEVVNIRGLPLRMIDTAGIRDTEDIVEKEGVRLTLEKIPEADLVLLVIDGSRPLDEDDRMILSALAGKRLILVENKCDLPRAVQIPDELVLMPRVTVSTSRGDGIDELKESIFQTF
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain

phrase: TIAAISTAAGEGGVGIVRVSGPDAPSIARRVFRRGSNGDFESHRFYYGSVVDAVTGEAVDEAMAVLMVRPRSYTREDVLEIQCHGGYLVTRRVLELVLAAGARLAEPGEFTRRAFLNG
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal

phrase: VAVLIAGKPNVGKSSLLNTLLQEKRAIVTSVPGTTRDIIEEVVNIRGLPLRMIDTAGIRDTEDIVEKEGVRLTLEKIPEADLVLLVIDGSRPLDEDDRMILSALAGKRLILVENKCDLPRAV
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: VLIAGKPNVGKSSLLNTLLQEKRAIVTSVPGTTRDIIEEVVNIRGLPLRMIDTAGIRDTEDIVEKEGVRLTLEKIPEADLVLLVIDGSRPLDEDDRMILSALAGKRLILVEN
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: REGVAVLIAGKPNVGKSSLLNTLLQEKRAIVTSVPGTTRDIIEEVVNIRGLPLRMIDTAGIRDTEDIVEKEGVRLTLEKIPEADLVLLVIDGSRPLDEDDRMILSALAGKRLILVENKCDLPRAVQIPDELVLMPRVTVSTSRGDGIDELKESIFQT
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain
Protein sequence:
MKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQCRVNEIETYMDGVHLICTTARVDRSFGDIPLVHGMPFVSGVGIEALQNKILTILQG

Annotated regions:
phrase: KIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQCRVNEIETYMDGVHLICTTARVDRSFGDIPLVHGMPFVSGVGIEA
type: DOMAIN
name: PTS_EIIB_2/3
description: Phosphotransferase system, EIIB component, type 2/3

phrase: RKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQCRVNEIETYMDGVHLICTTARVDRSFGDIPLVHGMPFVSGVGIEALQNKILTILQ
type: DOMAIN
name: PTS_EIIB_2
description: Phosphotransferase system, EIIB component, type 2
Protein sequence:
MEDLDQSPLVSSSDSPPRPQPAFKYQFVREPEDEEEEEEEEEEDEDEDLEELEVLERKPAAGLSAAPVPTAPAAGAPLMDFGNDFVPPAPRGPLPAAPPVAPERQPSWDPSPVSSTVPAPSPLSAAAVSPSKLPEDDEPPARPPPPPPASVSPQAEPVWTPPAPAPAAPPSTPAAPKRRGSSGSVDETLFALPAASEPVIRSSAENMDLKEQPGNTISAGQEDFPSVLLETAASLPSLSPLSAASFKEHEYLGNLSTVLPTEGTLQENVSEASKEVSEKAKTLLIDRDLTEFSELEYSEMGSSFSVSPKAESAVIVANPREEIIVKNKDEEEKLVSNNILHNQQELPTALTKLVKEDEVVSSEKAKDSFNEKRVAVEAPMREEYADFKPFERVWEVKDSKEDSDMLAAGGKIESNLESKVDKKCFADSLEQTNHEKDSESSNDDTSFPSTPEGIKDRSGAYITCAPFNPAATESIATNIFPLLGDPTSENKTDEKKIEEKKAQIVTEKNTSTKTSNPFLVAAQDSETDYVTTDNLTKVTEEVVANMPEGLTPDLVQEACESELNEVTGTKIAYETKMDLVQTSEVMQESLYPAAQLCPSFEESEATPSPVLPDIVMEAPLNSAVPSAGASVIQPSSSPLEASSVNYESIKHEPENPPPYEEAMSVSLKKVSGIKEEIKEPENINAALQETEAPYISIACDLIKETKLSAEPAPDFSDYSEMAKVEQPVPDHSELVEDSSPDSEPVDLFSDDSIPDVPQKQDETVMLVKESLTETSFESMIEYENKEKLSALPPEGGKPYLESFKLSLDNTKDTLLPDEVSTLSKKEKIPLQMEELSTAVYSNDDLFISKEAQIRETETFSDSSPIEIIDEFPTLISSKTDSFSKLAREYTDLEVSHKSEIANAPDGAGSLPCTELPHDLSLKNIQPKVEEKISFSDDFSKNGSATSKVLLLPPDVSALATQAEIESIVKPKVLVKEAEKKLPSDTEKEDRSPSAIFSAELSKTSVVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQAKIPGLKRKAE

Annotated regions:
phrase: VVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYL
type: DOMAIN
name: Reticulon
description: Reticulon

phrase: VVDLLYWRDIKKTGVVFGASLFLLLSLTVFSIVSVTAYIALALLSVTISFRIYKGVIQAIQKSDEGHPFRAYLESEVAISEELVQKYSNSALGHVNCTIKELRRLFLVDDLVDSLKFAVLMWVFTYVGALFNGLTLLILALISLFSVPVIYERHQAQIDHYLGLANKNVKDAMAKIQAKIPGLKRKA
type: DOMAIN
name: Reticulon
description: Reticulon
Protein sequence:
MRKQVEIFTDGSCLGNPGPGGYGALLRYKQHEKPLSAGYRLTTNNRMELMAAIAALETLTTECDVVLCTDSQYVRQGITSWIHNWKKRGWKTADKKPVKNVDLWQRLDTAIQRHSVRWEWVKGHAGHPENERCDELARAAAGAPTLDDTGYQAE

Annotated regions:
phrase: MRKQVEIFTDGSCLGNPGPGGYGALLRYKQHEKPLSAGYRLTTNNRMELMAAIAALETLTTECDVVLCTDSQYVRQGITSWIHNWKKRGWKTADKKPVKNVDLWQRLDTAIQRHSVRWEWVKGHAGHPENERCDELARAAA
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: KQVEIFTDGSCLGNPGPGGYGALLRYKQHEKPLSAGYRLTTNNRMELMAAIAALETLTTECDVVLCTDSQYVRQGITSWIHNWKKRGWKTADKKPVKNVDLWQRLDTAIQRHSVRWEWVKGHAGHPENERCDELARAA
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain
Protein sequence:
MAAEVTETAQPVETAASTDNNREQREPRRGGRERNPNRDRGNRDADKSQFLERVVTINRVSKVVKGGRRFSFTALVVVGDGNGLVGVGYGKAREVPLAISKGVEEAKKNFFRVPRVANTIPHPVQGEAAAGVVLLRPAAAGTGVIAGGPVRAVLECAGIHDVLSKSLGSSNTINIVHATVEALQQLEEPRAVAARRGLDYDRVAPEKLLQIEARAAEAAAAAKKAGAEKVGA

Annotated regions:
phrase: GRRFSFTALVVVGDGNGLVGVGYGKAREVPLA
type: CONSERVED_SITE
name: Ribosomal_uS5_N_CS
description: Small ribosomal subunit protein uS5, N-terminal, conserved site

phrase: EAAAGVVLLRPAAAGTGVIAGGPVRAVLECAGIHDVLSKSLGSSNTINIVHATVEALQQLEEPRAVAAR
type: DOMAIN
name: Ribosomal_uS5_C
description: Small ribosomal subunit protein uS5, C-terminal

phrase: LERVVTINRVSKVVKGGRRFSFTALVVVGDGNGLVGVGYGKAREVPLAISKGVEEAKKNFFRV
type: DOMAIN
name: Ribosomal_uS5_N
description: Small ribosomal subunit protein uS5, N-terminal

phrase: FLERVVTINRVSKVVKGGRRFSFTALVVVGDGNGLVGVGYGKAREVPLAISKGVEEAKKNFFR
type: DOMAIN
name: Ribosomal_uS5_N
description: Small ribosomal subunit protein uS5, N-terminal
Protein sequence:
MKKNHLVKYLLISPSLPVGGFCYSEGLESYLKIKNLEEPDHIRNLITNELKIGQIRIEAKCLIEFFDIFVELKIANNINKNRRRLLSLDKWLLSFRDTVEIRDQQTQMAKSLFELTKEFGFEYLYEKNKNISWSLAWSWACFSFQINKLEMIENFIYAWTANQLSAAIRLIPMGSIKAQTIQLELLDLISEVSQEIVDSNINDLYVGNISLSMAQQNHNDLYTKLFRN

Annotated regions:
Protein sequence:
MNNGFFNSDFDSIFRRMMQDMQGSNQVGNKKYYINGKEVSPEELAQLTQQGSNQSAEQSAQAFQQAAQRQQGQQGGNGNYLEQIGRNLTQEARDGLLDPVIGRDKEIQETAEVLSRRTKNNPILVGEAGVGKTAIVEGLAQAIVEGNVPAAIKDKEIISVDISSLEAGTQYRGAFEENIQKLIEGVKSSQNAVLFFDEIHQIIGSGATGSDSGSKGLSDILKPALSRGEISIIGATTQDEYRNNILKDAALTRRFNEVLVNEPSAKDTVEILKGIREKFEEHHQVKLPDDVLKACVDLSIQYIPQRLLPDKAIDVLDITAAHLSAQSPAVDKVETEKRISELENDKRKAVSAEEYKKADDIQNEIKSLQDKLENSNGEHTAVATVHDISDTIQRLTGIPVSQMDDNDIERLKNISNRLRSKIIGQDQAVEMVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLAIDLFGNKDALIRLDMSEYSDTTAVSKMIGTTAGYVGYDDNSNTLTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFKNTIIICTSNAGFGNGNDAEEKDIMHEMKKFFRPEFLNRFNGIVEFLHLDKDALQDIVNLLLDDVQVTLDKKGITMDVSQDAKDWLIEEGYDEELGARPLRRIVEQQVRDKITDYYLDHTDVKHVDIDVEDNELVVKGK

Annotated regions:
phrase: RPIGSFLFVGPTGVGKTELAKQLAIDLFGNKDALIRLDMSEYSDTTAVSKMIGTTAGYVGYDDNSNTLTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFKNTIIICTSNAGFGNGNDAEEKDIMHEMKKFFRPEFLNRF
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: LDKDALQDIVNLLLDDVQVTLDKKGITMDVSQDAKDWLIEEGYDEELGARPLRRIVEQQVRDKITDYYLDH
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal

phrase: SAKDTVEILKGIREKFEEHHQVKLPDDVLKACVDLSIQYIPQRLLPDKAIDVLDITAAHLSAQSPAVDKVETEKRISELENDKRKAVSAEEYKKADDIQ
type: DOMAIN
name: ClpA/ClpB_AAA_lid
description: ClpA/ClpB, AAA lid domain

phrase: ILVGEAGVGKTAIVEGLAQAIVEGNVPAAIKDKEIISVDISSLEAGTQYRGAFEENIQKLIEGVKSSQNAVLFFDEIHQIIGSGATGSDSGSKGLSDILKPALSRGEISIIGATTQDEYRNNILKDAALTRRF
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: LDKDALQDIVNLLLDDVQVTLDKKGITMDVSQDAKDWLIEEGYDEELGARPLRRIVEQQVRDKITDYYLDHTDVKHVDIDVEDNELV
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal

phrase: TKNNPILVGEAGVGKTAIVEGLAQAIVEGNVPAAIKDKEIISVDISSLEAGTQYRGAFEENIQKLIEGVKSSQNAVLFFDEIHQIIGSGATGSDSGSKGLSDILKPALSRGEISIIGATTQDEYRNNILKDAALTRRFNEVLVNEPS
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: PIGSFLFVGPTGVGKTELAKQLAIDLFGNKDALIRLDMSEYSDTTAVSKMIGTTAGYVGYDDNSNTLTEKVRRNPYSVILFDEIEKANPQILTLLLQVMDDGNLTDGQGNVINFKNTIIICTSNAGFGNGNDAEEKDIMHEMKKFFRPEFLNRFNGIVEFLHL
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain
Protein sequence:
MDKKKNSFPDNLPEGTISELMQKQNNVQPSVIVIGSGISGLAAARNLSEASFKVTVLESRDRIGGRIHTDYSFGCPVDMGASWLHGVSDENPLAPIIRRLGLTLYRTSGDDSILYDHDLESYGLFDMHGNKIPPQLVTKVGDAFKRILEETEKIRDETANDMSVLQGISIVLDRNPELRQEGMAYEVLQWYLCRMEAWFAVDANLISLKCWDQDECLSGGHGLMVQGYEPVIRTIAKDLDIRLNHRVTKVVRTSNNKVIVAVEGGTNFVADAVIITVPIGVLKANLIQFEPELPQWKTSAISGLGVGNENKIALRFDRAFWPNVEFLGMVAPTSYACGYFLNLHKATGHPVLVYMAAGNLAQDLEKLSDEATANFVMLQLKKMFPDAPDPAQYLVTRWGTDPNTLGCYAYDVVGMPEDLYPRLGEPVDNIFFGGEAVNVEHQGSAHGAFLAGVSASQNCQRYIFERLGAWEKLKLVSLMGNSDILETATVPLQISRM

Annotated regions:
phrase: ISGLAAARNLSEASFKVTVLESRDRIGGRIHTDYSFGCPVDMGASWLHGVSDENPLAPIIRRLGLTLYRTSGDDSILYDHDLESYGLFDMHGNKIPPQLVTKVGDAFKRILEETEKIRDETANDMSVLQGISIVLDRNPELRQEGMAYEVLQWYLCRMEAWFAVDANLISLKCWDQDECLSGGHGLMVQGYEPVIRTIAKDLDIRLNHRVTKVVRTSNNKVIVAVEGGTNFVADAVIITVPIGVLKANLIQFEPELPQWKTSAISGLGVGNENKIALRFDRAFWPNVEFLGMVAPTSYACGYFLNLHKATGHPVLVYMAAGNLAQDLEKLSDEATANFVMLQLKKMFPDAPDPAQYLVTRWGTDPNTLGCYAYDVVGMPEDLYPRLGEPVDNIFFGGEAVNVEHQGSAHGAFLAGVSASQ
type: DOMAIN
name: Amino_oxidase
description: Amine oxidase
Protein sequence:
MDNGESSSTNNSSRPWESYNTVFTNAKAGMEGVDKEKVQRVVYEMSKGSKYFQNEERKEALMKQKIEHMRDRCAKLSSLDLSNYQKVVDKRILELEATRDLSRIWLHVDMDAFYAAVETLSDPSIKGKPMAVGGLSMISTANYEARKFGVRAAMPGFIARKLCPDLIFVPVDFTKYTHYSDLTRKVFRNYDPHFIAGSLDEAYLDITEVCRERGLSGGEIAEELRSSVYSETGLTCSAGVAANRLLAKVCSDINKPNGQFVLQNDRSTVMTFVSFLPVRKIGGIGKVTEHILKDALGIKTCEEMVQKGSLLYALFSQSSADFFLSVGLGLGGTNTPQVRSRKSISSERTFAATGDERLLYSKLDELAEMLSHDMKKEGLTARTLTLKLKTASFEIRSRAVSLQRYTCSSDDILKHATKLLKAELPVSVRLIGLRMSQFVEEIRNSDPSQGTITKFIVQKDSSRQAQDLDDNDSFDLDANKNCLSNDESGNVSFGSHETSSAHLKDVVEYEERSQIDSGKVIPNQECMKKEERLQILEGDSLLKKYKECKPDTSHSMNDNSNATEAVSVFPQTEPLYWIDGYKCVLCGIELPPSFVEERQEHSDFHLAQRLQNEETGSSSSTTPSKRRILGKEKVNSKPKKQKPDQKDSSKHIPIHAFFTKSNQNSNETQRK

Annotated regions:
phrase: YWIDGYKCVLCGIELPPSFVEERQEHSDFHLAQRLQN
type: DOMAIN
name: UBZ3
description: DNA polymerase eta, ubiquitin-binding zinc finger

phrase: RKSISSERTFAATGDERLLYSKLDELAEMLSHDMKKEGLTARTLTLKLKTASFEIRSRAVSLQRYTCSSDDILKHATKLLKAELPVSVRLIGLRMSQFVEEI
type: DOMAIN
name: DNA_pol_Y-fam_little_finger
description: DNA polymerase, Y-family, little finger domain

phrase: WLHVDMDAFYAAVETLSDPSIKGKPMAVGGLSMISTANYEARKFGVRAAMPGFIARKLCPDLIFVPVDFTKYTHYSDLTRKVFRNYDPHFIAGSLDEAYLDITEVCRERGLSGGEIAEELRSSVYSETGLTCSAGVAANRLLAKVCSDINKPNGQFVLQNDRSTVMTFVSFLPVRKIGGI
type: DOMAIN
name: UmuC
description: UmuC domain

phrase: VDMDAFYAAVETLSDPSIKGKPMAVGGLSMISTANYEARKFGVRAAMPGFIARKLCPDLIFVPVDFTKYTHYSDLTRKVFRNYDPHFIAGSLDEAYLDITEVCRERGLSGGEIAEELRSSVYSETGLTCSAGVAANRLLAKVCS
type: DOMAIN
name: UmuC
description: UmuC domain

phrase: DGYKCVLCGIELPPSFVEERQEHSDFHLAQRLQN
type: DOMAIN
name: UBZ3
description: DNA polymerase eta, ubiquitin-binding zinc finger
Protein sequence:
MTKQGNDTQKRFFNDNLQTVDVAIFDAIRGEFERQQHEIELIASENIVSRAVLEAQGSVLTNKYAEGYPGKRYYGGCQFVDVIENLAIERAKKLFGADFANVQANSGSQMNQAVFLALLKPGDTFMGLDLNSGGHLTHGSSVNMSGKWFKSISYGVRKEDQLLDMEAVERLAKEHKPKLIIAGGSAYSRLWDWKKFREIADEIGAYLLVDMSHIAGLVAGGVHPSPVPHAHIVTTTTHKSLRGPRGGLILTNDEILAKKINSAIFPGLQGGPLMHVIAAKAVAFEEALQPVFKDYSANVVANAKTLAKTLQSNGFDIVSGGTDNHLLLVDLRSKKVTGKCAELALGRAHITCNKNSIPFDLETPFITSGIRLGSPAATTRGFAENEFIEIAHMISEILDNLGMAKSDEDNSAVEMVVRKKVEDMTNKFPLYSYLHTC

Annotated regions:
phrase: HIVTTTTHKSLRGPRG
type: BINDING_SITE
name: Ser_HO-MeTrfase_PLP_BS
description: Serine hydroxymethyltransferase, pyridoxal phosphate binding site

phrase: LQTVDVAIFDAIRGEFERQQHEIELIASENIVSRAVLEAQGSVLTNKYAEGYPGKRYYGGCQFVDVIENLAIERAKKLFGADFANVQANSGSQMNQAVFLALLKPGDTFMGLDLNSGGHLTHGSSVNMSGKWFKSISYGVRKEDQLLDMEAVERLAKEHKPKLIIAGGSAYSRLWDWKKFREIADEIGAYLLVDMSHIAGLVAGGVHPSPVPHAHIVTTTTHKSLRGPRGGLILTNDEILAKKINSAIFPGLQGGPLMHVIAAKAVAFEEALQPVFKDYSANVVANAKTLAKTLQSNGFDIVSGGTDNHLLLVDLRSKKVTGKCAELALGRAHITCNKNSIPFDLETPFITSGIRLGSPAATTRGFAENEFIEIAHM
type: DOMAIN
name: SHMT-like_dom
description: Serine hydroxymethyltransferase-like domain
Protein sequence:
MSRVAKAPVVVPAGVTITLSGQDITVKGPIGELSRTIHSDVVVSQEENNIITNIVADVKGAWAQAGTTRALINNMVEGVSKGFEKKLVLQGVGYRAKAAGKSLDLSLGFSHPIKHAIPEGITCETPSQTEVTLKGCDKHLVGQTAANIRAYRKPEPYKGKGVRYVDEYVRRKEAKKK

Annotated regions:
phrase: PEPYKGKG
type: CONSERVED_SITE
name: Ribosomal_uL6_CS
description: Large ribosomal subunit protein uL6, conserved site

phrase: VPAGVTITLSGQDITVKGPIGELSRTIHSDVVVSQEENNIITNIVADVKGAWAQAGTTRALINNMVEGVSK
type: DOMAIN
name: Ribosomal_uL6_a/b-dom
description: Large ribosomal subunit protein uL6, alpha-beta domain

phrase: GVGYRAKAAGKSLDLSLGFSHPIKHAIPEGITCETPSQTEVTLKGCDKHLVGQTAANIRAYRKPEPYKGKGVR
type: DOMAIN
name: Ribosomal_uL6_a/b-dom
description: Large ribosomal subunit protein uL6, alpha-beta domain
Protein sequence:
MAVAHNLGFPRIGADRELKKALEAYWKGELDEQGLRQVGRQLRARHWQAQLDAGIELLPVGDFAWYDQVLSHSLMFGVIPQRFRPAEGQATLDTLFAMARGVARSCCGGAQAQEMTKWFDTNYHYLVPEFSVDQQFQLSWTQLFEEVEEAKALGHAIKPVLIGPLSYLWLGKLKGEADQTQTFDKLELLDRLLPVYGEVLDRLAAQGVEWVQIDEPILALDLPQDWKNAFERAYNLLQRAPLKKLVATYFGGLEDNLGLAATLPVDGLHIDLVRAPEQYPVILDRLPAYKVLSLGLVNGRNVWRCDLDKALEVARHAAERLGERLWLAPSCSLLHSPVDLEREDRLDEEVKSWLAFAVQKCSEVATLARAIDDPQDAEVQAALARSRAVQAARAQSPRIHKPAVQARLAAIEAKDSRRTSVFATRIELQRARLQLPAFPTTTIGSFPQTPAIRLARQAYKQGRLSLGDYTEAMQAEIRHAVAVQEQIGLDVLVHGEAERNDMVEYFAEQLEGYVFTRFGWVQSYGSRCVKPAIIYGDLSRPRPMTVDWIRYAQQQTDRIMKGMLTGPVTMLMWSFAREDVPREVQARQLALAIRDEVCDLEAAGIRIIQIDEAAFREGLPLRREQWRHYLDWAVEAFRLCASGVRDETQIHTHMCYSEFNDVIESIAAMDADVITIETSRSQMELLEAFRAFDYPNDIGPGVYDIHSPRVPDTAEMVQLLEKAAECIPAERLWVNPDCGLKTRGWPETEAALVNMVAAARQLRAARSAKVA

Annotated regions:
phrase: AHNLGFPRIGADRELKKALEAYWKGELDEQGLRQVGRQLRARHWQAQLDAGIELLPVGDFAWYDQVLSHSLMFGVIPQRFRPAEGQATLDTLFAMARGVARSCCGGAQAQEMTKWFDTNYHYLVPEFSVDQQFQLSWTQLFEEVEEAKALGHAIKPVLIGPLSYLWLGKLKGEADQTQTFDKLELLDRLLPVYGEVLDRLAAQGVEWVQIDEPILALDLPQDWKNAFERAYNLLQRAPLKKLVATYFGGLEDNLGLAATLPVDGLHIDLVRAPEQYPVILDRLPAYKVLSLGLVNGRNVWRCDLDKALEVARHAA
type: DOMAIN
name: Cbl-indep_Met_Synth_N
description: Cobalamin-independent methionine synthase MetE, N-terminal

phrase: PTTTIGSFPQTPAIRLARQAYKQGRLSLGDYTEAMQAEIRHAVAVQEQIGLDVLVHGEAERNDMVEYFAEQLEGYVFTRFGWVQSYGSRCVKPAIIYGDLSRPRPMTVDWIRYAQQQTDRIMKGMLTGPVTMLMWSFAREDVPREVQARQLALAIRDEVCDLEAAGIRIIQIDEAAFREGLPLRREQWRHYLDWAVEAFRLCASGVRDETQIHTHMCYSEFNDVIESIAAMDADVITIETSRSQMELLEAFRAFDYPNDIGPGVYDIHSPRVPDTAEMVQLLEKAAECIPAERLWVNPDCGLKTRGWPETEAALVNM
type: DOMAIN
name: Met_Synth_C/arc
description: Cobalamin-independent methionine synthase MetE, C-terminal/archaeal

phrase: FPTTTIGSFPQTPAIRLARQAYKQGRLSLGDYTEAMQAEIRHAVAVQEQIGLDVLVHGEAERNDMVEYFAEQLEGYVFTRFGWVQSYGSRCVKPAIIYGDLSRPRPMTVDWIRYAQQQTDRIMKGMLTGPVTMLMWSFAREDVPREVQARQLALAIRDEVCDLEAAGIRIIQIDEAAFREGLPLRREQWRHYLDWAVEAFRLCASGVRDETQIHTHMCYSEFNDVIESIAAMDADVITIETSRSQMELLEAFRAFDYPNDIGPGVYDIHSPRVPDTAEMVQLLEKAAECIPAERLWVNPDCGLKTRGWPETEAALVNMVAAA
type: DOMAIN
name: Met_Synth_C/arc
description: Cobalamin-independent methionine synthase MetE, C-terminal/archaeal
Protein sequence:
MPSRNILVINCGSSSIKFALVNEAHSLFPLHGLAERLGSRDAVLRWKRGGDSDSLMIPNADHRAALAQLLPMVQNAAGGKLHGIGHRVVHGGELFTHATRIDDRVVEAIRATAPLAPLHNPANLQGIEAAMTLFPKLPHVAVFDTAFHQSLPEHAYRYALPEALYREHGVRRYGFHGTSHRYVSHRAAEMAGLAVGDSSWLSAHLGNGSSTCAIVNGQSLDTSMGLTPLEGLVMGTRSGDVDPNLHSHLARTLGWSLERIDSMLNNESGLLGLSDLSNDMRTLEQEREQGHPGAALAIEVFCYRLAKSLAAMSCALPQLDGVIFTGGIGENSPLVRAKTAAHLRLFDLRLDQEANARCVRGVAGPIQAAGHPRVLVIPTNEERQIALDTLALLD

Annotated regions:
phrase: ILVINCGSSSI
type: CONSERVED_SITE
name: Aliphatic_acid_kinase_CS
description: Aliphatic acid kinase, short-chain, conserved site
Protein sequence:
MYAVIKTGGKQYRVSAGDKLKIEKLEAEVGSEITFDQVLMVGDGADIKMGAPLLRGATVSATVLNQARGDKIKIFKMRRRKHYRKSQGHRQYFTEVQIGGITA

Annotated regions:
phrase: IKIFKMRRRKHYRKSQGHRQYF
type: CONSERVED_SITE
name: Ribosomal_bL21_CS
description: Large ribosomal subunit protein bL21, conserved site
Protein sequence:
MMQICDSYNQKNSLFNAMNRFIGAVNNMDQTVMVPSLLRDVPLDQEEEKEVTSFQDGDMYGSYVLLKSIRNDIEWGVLQAEERRKEKHGVTTTSLEVSRIEPNDKDLEKLFHYHLSGLHTVLAKLTRKANTLTNRYKQEIGIGGCGN

Annotated regions:
Protein sequence:
MSKVKGDLEKSDKRPPSSMSTGSADSGVFSSGVHASSPSHSQGSSSQSGPPSPTTQLNSLLFETANLIAVNEQLRKEIAENKQIQTNQMRALRYSSNPVDQPFVANSISPHHGFPQRPPRGERRMQKPESYKTVICQAWLESKTCTFAENCRFAHGEEELRPAKLESRQNNKYKTKLCDKYTTTGLCPYGKRCLFIHPDNQPNAYIRADKLYEVSQRHALADLRDHVESQIMTGNTRNSYNQQPPPMGGLEMQSSPMKSSSDSSHMRSPMAQMNCETTRPHPSWPLESSSFFLPPEMSSINNNNLMSPFETPFPNGSTGIQPHFVTAKRRAAFPPVPSNFQQDDDNMSSIPGFDHLAEDMAKHLELW

Annotated regions:
phrase: SYKTVICQAWLESKTCTFAENCRFAHGE
type: DOMAIN
name: Znf_CCCH
description: Zinc finger, CCCH-type

phrase: SYKTVICQAWLESKTCTFAENCRFAHG
type: DOMAIN
name: Znf_CCCH
description: Zinc finger, CCCH-type

phrase: KYKTKLCDKYTTTGLCPYGKRCLFIHP
type: DOMAIN
name: Znf_CCCH
description: Zinc finger, CCCH-type

phrase: KYKTKLCDKYTTTGLCPYGKRCLFIHPD
type: DOMAIN
name: Znf_CCCH
description: Zinc finger, CCCH-type

phrase: YKTKLCDKYTTTGLCPYGKRCLFIH
type: DOMAIN
name: Znf_CCCH
description: Zinc finger, CCCH-type

phrase: YKTVICQAWLESKTCTFAENCRFAHG
type: DOMAIN
name: Znf_CCCH
description: Zinc finger, CCCH-type
Protein sequence:
MERDSHGNASPARTPSAGASPAQASPAGTPPGRASPAQASPAQASPAGTPPGRASPAQASPAGTPPGRASPGRASPAQASPAQASPARASPALASLSRSSSGRSSSARSASVTTSPTRVYLVRATPVGAVPIRSSPARSAPATRATRESPGTSLPKFTWREGQKQLPLIGCVLLLIALVVSLIILFQFWQGHTGIRYKEQRESCPKHAVRCDGVVDCKLKSDELGCVRFDWDKSLLKIYSGSSHQWLPICSSNWNDSYSEKTCQQLGFESAHRTTEVAHRDFANSFSILRYNSTIQESLHRSECPSQRYISLQCSHCGLRAMTGRIVGGALASDSKWPWQVSLHFGTTHICGGTLIDAQWVLTAAHCFFVTREKVLEGWKVYAGTSNLHQLPEAASIAEIIINSNYTDEEDDYDIALMRLSKPLTLSAHIHPACLPMHGQTFSLNETCWITGFGKTRETDDKTSPFLREVQVNLIDFKKCNDYLVYDSYLTPRMMCAGDLRGGRDSCQGDSGGPLVCEQNNRWYLAGVTSWGTGCGQRNKPGVYTKVTEVLPWIYSKMEVRSLQQDTAPSRLGTSSGGDPGGAPRL

Annotated regions:
phrase: DSCQGDSGGPL
type: ACTIVE_SITE
name: TRYPSIN_SER
description: Serine proteases, trypsin family, serine active site

phrase: IRYKEQRESCPKHAVRCDGVVDCKLKSDELGCVRFDWDKSLLKIYSGSSHQWLPICSSNWNDSYSEKTCQQLGFESAHRTTEVAHRDFANSFSILRYNSTIQESLHRSECPSQRYISLQCS
type: DOMAIN
name: SRCR
description: SRCR domain

phrase: RIVGGALASDSKWPWQVSLHFGTTHICGGTLIDAQWVLTAAHCFFVTREKVLEGWKVYAGTSNLHQLPEAASIAEIIINSNYTDEEDDYDIALMRLSKPLTLSAHIHPACLPMHGQTFSLNETCWITGFGKTRETDDKTSPFLREVQVNLIDFKKCNDYLVYDSYLTPRMMCAGDLRGGRDSCQGDSGGPLVCEQNNRWYLAGVTSWGTGCGQRNKPGVYTKVTEVLPW
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain

phrase: RCDGVVDCKLKSDELG
type: REPEAT
name: LDrepeatLR_classA_rpt
description: Low-density lipoprotein (LDL) receptor class A repeat

phrase: LTAAH
type: ACTIVE_SITE
name: TRYPSIN_HIS
description: Serine proteases, trypsin family, histidine active site

phrase: VRFDWDKSLLKIYSGSSHQWLPICSSNWNDSYSEKTCQQLGFESAHRTTEVAHRDFANSFSILRYNSTIQESLHRSECPSQRYISLQCSHC
type: DOMAIN
name: SRCR
description: SRCR domain

phrase: IVGGALASDSKWPWQVSLHFGTTHICGGTLIDAQWVLTAAHCFFVTREKVLEGWKVYAGTSNLHQLPEAASIAEIIINSNYTDEEDDYDIALMRLSKPLTLSAHIHPACLPMHGQTFSLNETCWITGFGKTRETDDKTSPFLREVQVNLIDFKKCNDYLVYDSYLTPRMMCAGDLRGGRDSCQGDSGGPLVCEQNNRWYLAGVTSWGTGCGQRNKPGVYTKVTEVLPWIYSKM
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain

phrase: IVGGALASDSKWPWQVSLHFGTTHICGGTLIDAQWVLTAAHCFFVTREKVLEGWKVYAGTSNLHQLPEAASIAEIIINSNYTDEEDDYDIALMRLSKPLTLSAHIHPACLPMHGQTFSLNETCWITGFGKTRETDDKTSPFLREVQVNLIDFKKCNDYLVYDSYLTPRMMCAGDLRGGRDSCQGDSGGPLVCEQNNRWYLAGVTSWGTGCGQRNKPGVYTKVTEVLPWIYS
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain

phrase: WDKSLLKIYSGSSHQWLPICSSNWNDSYSEKTCQQLGFESAHRTTEVAHRDFANSFSILRYNSTIQESLHRSECPSQRYISLQCSHCGL
type: DOMAIN
name: SRCR
description: SRCR domain

phrase: IVGGALASDSKWPWQVSLHFGTTHICGGTLIDAQWVLTAAHCFFVTREKVLEGWKVYAGTSNLHQLPEAASIAEIIINSNYTDEEDDYDIALMRLSKPLTLSAHIHPACLPMHGQTFSLNETCWITGFGKTRETDDKTSPFLREVQVNLIDFKKCNDYLVYDSYLTPRMMCAGDLRGGRDSCQGDSGGPLVCEQNNRWYLAGVTSWGTGCGQRNKPGVYTKVTEVLPW
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain
Protein sequence:
MAAPAPSLISVFSSPQELGASLAQLVAQRAASCLEGDRGRFALGLSGGSLVSMLARDLPAAAAPAGPASFARWTLGFCDERLVPFDHAESTYGLYRTHLLSKLPIPDSQVLTINPALPVEDAAEDYARKLRQALQGDAVPVFDLLILGVGPDGHTCSLFPDHPLLQEREKIVAPISDSPKPPPQRVTLTLPVLNAAQSIIFVATGEGKAAVLKRILEDKEGTLPAALVQPRTGALCWFLDEAAARLLSVPFEKHSTL

Annotated regions:
phrase: VFSSPQELGASLAQLVAQRAASCLEGDRGRFALGLSGGSLVSMLARDLPAAAAPAGPASFARWTLGFCDERLVPFDHAESTYGLYRTHLLSKLPIPDSQVLTINPALPVEDAAEDYARKLRQALQGDAVPVFDLLILGVGPDGHTCSLFPDHPLLQEREKIVAPISDSPKPPPQRVTLTLPVLNAAQSIIFVATGEGKAAVLKRILEDKEGTLPAALVQPRTGALCWFLDEAAAR
type: DOMAIN
name: 6-phosphogluconolactonase_DevB
description: 6-phosphogluconolactonase, DevB-type

phrase: QELGASLAQLVAQRAASCLEGDRGRFALGLSGGSLVSMLARDLPAAAAPAGPASFARWTLGFCDERLVPFDHAESTYGLYRTHLLSKLPIPDSQVLTINPALPVEDAAEDYARKLRQALQGDAVPVFDLLILGVGPDGHTCSLFPDHPLLQEREKIVAPISDSPKPPPQRVTLTLPVLNAAQSIIFVATGEGKAAVLKRILEDKEGTLPAALVQPRTGALCWF
type: DOMAIN
name: 6-phosphogluconolactonase_DevB
description: 6-phosphogluconolactonase, DevB-type

phrase: SPQELGASLAQLVAQRAASCLEGDRGRFALGLSGGSLVSMLARDLPAAAAPAGPASFARWTLGFCDERLVPFDHAESTYGLYRTHLLSKLPIPDSQVLTINPALPVEDAAEDYARKLRQALQGDAVPVFDLLILGVGPDGHTCSLFPDHPLLQEREKIVAPISDSPKPPPQRVTLTLPVLNAAQSIIFVATGEGKAAVLKRILEDKEGTLPAALVQPRTGALC
type: DOMAIN
name: Glc/Gal-6P_isomerase
description: Glucosamine/galactosamine-6-phosphate isomerase
Protein sequence:
MSGHSKWSTIKRKKGTLDAKRNKIFTKLIREISIAARMGGGDIDSNPRLRLAVNKARVANMPKDNIEKAIKKGIGDNMGSEYFELTYEAYALYGVALIIKCLTDNKNRTASEVRSVLSKSGGSLGAPGSVSYMFHKKGLISYNLDKYHEDEIIELALEAGAEDIYSEGSQVEVITSADNFESVSSILRTKFEEDIAEVALVPESKVALDKEQMDKVLAIIEKLEDCDDVQEVYHNLEIVDDIC

Annotated regions:
phrase: SKWSTIKRKKGTLDAKRNKIFTKLIREISIAARMGGGDIDSNPRLRLAVNKARVANMPKDNIEKAIKKGI
type: DOMAIN
name: TACO1_YebC_N
description: TACO1/YebC-like, N-terminal domain

phrase: YFELTYEAYALYGVALIIKCLTDNKNRTASEVRSVLSKSGGSLGAPGSVSYMFHKKGLISYNLDKYHEDEIIELALEAGAEDIYSEGSQVEVITSADNFESVSSILRTKFEEDIAEVALVPESKVALDKEQMDKVLAIIEKLEDCDDVQEVYHN
type: DOMAIN
name: TACO1_YebC-like_2nd/3rd_dom
description: TACO1/YebC-like, second and third domains
Protein sequence:
MTEETRKSQLSRRQLLGTSAFVAAAGASGLGGALLAGSSETALAAGAAKGGMSPEVKPGELDEYYVFFSSGQCGEVRIVGLPSMRELMRIPVFNRDSATGWGLTNESRKVLTEGLLPQDREFLKDRGDIFLNGDLHHPHPSFTDGTYDGRYLYANDKANTRVCRIRLDVMKCDKIIQLPNQHTVHGLRVQKYPKTGYVFCNGEDRVPIPNDGSHLNDVKQYHAIFTAVDGETMKVAWQVMVDGNLDNVDCDYQGKYAFSTCYNSEEGTTLAEMMSSEQDWIVVFNLKRIEEAVANGDFKEMNGVPVIDGRHGSKYTRYIPVPNSPHGINTAPDGIHVVANGKLSPTVTVFDVRKFDDLFDDKIKPRDAVVAEPELGLGPLHTAYDDKGNAYTTLFIDSQICKWNIEDAKRAFKGEKVDPIRQKLDVHYQPGHNHSSMGQTKEVDGKWLISLNKFSKDRYLNVGPLKPENDQLIDISGDKMVIVHDGPSFAEPHDATIVHRSKINPVSFWSREDPFFADAVAQAKADGLDLMEANEVVRDGNKVRVYMTSSAPAFGLTEFTVQQDDEVTVYVTNIDEIEDLTHGFAIVNYGVNMEVAPQATASVTFKASKPGVWWYYCSWFCHAMHMEMQGRMLVEPKKA

Annotated regions:
phrase: LPNQHTVHGLRVQKYPKTGYVFCNGEDRVPIPNDGSHLNDVKQYHAIFTAVDGETMKVAWQVMVDGNLD
type: REPEAT
name: NOS_propeller_2
description: Nitrous oxide reductase, propeller repeat 2

phrase: KVRVYMTSSAPAFGLTEFTVQQDDEVTVYVTNIDEIEDLTHGFAIVNYGVNMEVAPQATASVTFKASKPGVWWYYCSWFCHAMHMEMQGRMLVE
type: DOMAIN
name: N2OR_C
description: Nitrous-oxide reductase, C-terminal

phrase: MTEETRKSQLSRRQLLGTSAFVAAAGASGLGGALLAGSSETAL
type: CONSERVED_SITE
name: TAT_signal
description: Twin-arginine translocation pathway, signal sequence

phrase: IEDLTHGFAIVNYGVNMEVAPQATASVTFKASKPGVWWYYCSWFCHAMHME
type: DOMAIN
name: CcO_II-like_C
description: Cytochrome c oxidase subunit II-like C-terminal

phrase: KLDVHYQPGHNHSSMGQTKEVDGKWLISLNKFSKDRYLNVGPLKPENDQLIDISGDKMVIVHDGPSFAEP
type: REPEAT
name: Nos_propeller
description: Nitrous oxide reductase, propeller repeat 1

phrase: RDGNKVRVYMTSSAPAFGLTEFTVQQDDEVTVYVTNIDEIEDLTHGFAIVNYGVNMEVAPQATASVTFKASKPGVWWYYCSWFCHAMHMEMQGRMLVEPKK
type: DOMAIN
name: CcO_II-like_C
description: Cytochrome c oxidase subunit II-like C-terminal
Protein sequence:
MSFQVVTGWLDNSPRRIFAFVSLASIGMLAFGQYLQHVVGLEPCPMCIVQRYALVLVAIIAGLTGASGRKGLHLGGAVLMLGSSGFGAYVAARQSWLQWYPPEVVSCGRDFYGMIETFPLQRAIPMIFKGSGDCSKVDWTFLGGSIANWTFVVFGLIVLLSLALIWRRVSRRVS

Annotated regions: