Protein sequence:
MGARASVLSGGKLDAWEKIRLRPGGKKKYRLKHIVWASRELKRFALNPGLLETTEGCKKIIGQLQPSLQTGSEELKSLFNTIVVLYYVHQKIEVRDTKEALDKLQEEQDKHQQKTQQATADKGVSKGVSQNYPILQNLQGQMVHQSLSPRTLNAWVKVIEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKDTINEEAAEWDRLHPVHAGPIPPGQMREPRGSDIAGTTSTLQEQIAWMTSNPPVPVGEIYKRWIILGLNKIVRMYSPVSILDIKQGPKEPFRDYVDRFFKTLRAEQATQEVKGWMTETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPSHKARILAEAMSKATGAAIMMQKSNFKGQRRIVKCFNCGKEGHIARNCRAPRKRGCWKCGQEGHQMKDCTERQANFFRENVAFQQGEARKFSSEQTRANSPASRELRVRGGDSSLPEAGAERQGTGSSLDFPQITLWQRPVVTIKVGGQLREALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYDQVSIEICGQKAIGTVLVGPTPVNIIGRNMLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKRSVTVLDVGDAYFSVPLDKEFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMIKILEPFRKENPEIVIYQYMDDLYVGSDLEIGQHRAKIEELREHLLRWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQAIQLPDKSSWTVNDIQKLVGKLNWASQIYPGIRVKHLCKLLRGTKALTDVVPLTAEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGHDQWTYQIYQEPHKNLKTGKYARRKSAHTNDVKQLTEVVQKVATEGIVIWGKVPKFRLPIQKETWEIWWTEYWQATWIPEWEFVNTPPLVKLWYQLETEPIIGAETFYVDGAANRETKLGKAGYITDRGRQKVVSLTETTNQKTELQAIQLALQDSGSEVNIVTDSQYALGIIQAHPDKSESEIVNQIIEQLIQKERVYLSWVPAHKGIGGNEQVDKLVSTGIRKVLFLDGIDKAQEEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQEAAYFILKLAGRWPVKIIHTDNGSNFTSAVVKAACWWAGIQQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQISKIQNFRVYFRDSRDPVWKGPAKLLWKGEGAVVIQDNNEIKVIPRRKAKIIRDYGKQMAGDDCVAGRQDED

Annotated regions:
phrase: YYDPSKDLIAEIQKQGHDQWTYQIYQEPHKNLKTGKYARRKSAHTNDVKQLTEVVQKVATEGIVIWGKVPKFRLPIQKETWEIWWTEYWQATWIPEWEFVN
type: DOMAIN
name: RVT_connect
description: Reverse transcriptase connection

phrase: SPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQEAAYFILKLAGRWPVKIIHTDNGSNFTSAVVKAACWWAGIQQEFGIPYN
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: KCFNCGKEGHIARNC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: KCFNCGKEGHIARNCR
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: GCWKCGQEGHQMKDCT
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: REALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYDQVSIEICGQKAIGTVLVGPTPVNIIGRN
type: DOMAIN
name: Peptidase_A2_cat
description: Peptidase A2A, retrovirus, catalytic

phrase: IKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKRSVTVLDVGDAYFSVPLDKEFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMIKILEPFRKENPEIVIYQYMDDLYVGSDLEIGQHRAKIEELREHLLRWGFTTPDKKHQKEPPFLWMGYE
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: VTIKVGGQLREALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYDQVSIEICGQKAIGTVLVGPTPVNIIGRNML
type: DOMAIN
name: Retropepsin-like_cat_dom
description: Retropepsin-like catalytic domain

phrase: IIGAETFYVDGAANRETKLGKAGYITDRGRQKVVSLTETTNQKTELQAIQLALQDSGSEVNIVTDSQYALGIIQAHPDKSESEIVNQIIEQLIQKERVYLSWVPAHKGIGGNEQVDKLVSTGI
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: YSPVSILDIKQGPKEPFRDYVDRFFKTLRAEQATQEVKGWMTETLLVQNANPDCKTILKALGPGATLEEMMT
type: DOMAIN
name: Gag_p24_C
description: Retroviral nucleocapsid Gag protein p24, C-terminal domain

phrase: KCFNCGKEGHIARNC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: RGCWKCGQEGHQMKDCT
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: QAIQLPDKSSWTVNDIQKLVGKLNWASQIYPGIRVKHLCKLLRGTKALTDVVPLTAEAELE
type: DOMAIN
name: RVT_thumb
description: Reverse transcriptase thumb

phrase: ALLDTGADDTV
type: ACTIVE_SITE
name: Aspartic_peptidase_AS
description: Aspartic peptidase, active site

phrase: FRVYFRDSRDPVWKGPAKLLWKGEGAVVIQDNNEIKVIPRRKAKIIR
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: WQRPVVTIKVGGQLREALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYDQVSIEICGQKAIGTVLVGPTPVNIIGRNMLTQIGCT
type: DOMAIN
name: Retropepsins
description: Retropepsins

phrase: DGIDKAQEEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKC
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: VDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQEAAYFILKLAGRWPVKIIHTDNGSNFTSAVVKAACWWAGIQQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDI
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: VYFRDSRDPVWKGPAKLLWKGEGAVVIQDNNEIKVIPRRKAKI
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: ETFYVDGAANRETKLGKAGYITDRGRQKVVSLTETTNQKTELQAIQLALQDSGSEVNIVTDSQYALGIIQAHPDKSESEIVNQIIEQLIQKERVYLSWVPAHKGIGGNEQVDKLVSTG
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: AQEEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKC
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: RASVLSGGKLDAWEKI
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: RPGGKKKYRLKHIVWASR
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: KRFALNPGLLETTEG
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: TGSEELKSLFNTIVVLYYV
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: HQKIEVRDTKEAL
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: EGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKRSVTVLDVGDAYFSVPLDKEFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMIKILEPFRKENPEIVIYQYMDDLYVGSDLEIGQHRAKIEELREHLLRWGFTTPDKKHQKEPPFLWMGYE
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: GARASVLSGGKLDAWEKIRLRPGGKKKYRLKHIVWASRELKRFALNPGLLETTEGCKKIIGQLQPSLQTGSEELKSLFNTIVVLYYVHQKIEVRDTKEALDKLQEEQDKHQQKTQQATADKGVSKGVSQN
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: CWKCGQEGHQMKDCT
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type