nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MRVLGIETSCDETGVAIYDTETGLLANQLYSQVKLHADYGGVVPELASRDHVRKTVPLIQAALREAGLQAGDIDGVAYTAGPGLVGALLVGATVGRSLAFAWDVPAIPVHHMEGHLLAPMLEDNPPAFPFVALLVSGGHTQLISVTGIGEYRLLGESIDDAAGEAFDKTAKLLGLDYPGGPMLSKMAQAGDSQRFTFPRPMTDRPGLDFSFSGLKTFAANTIRSNGDDDQTRADIARAFEDAVVDTLAIKCRRALDETGFKRLVMAGGVSANRTLRQCLGDVMAKRGGEVFYARPEFCTDNGAMIAYAGSVRLAHGASQTLGVSVRPRWPLAELPAV

Annotated regions:
phrase: RSLAFAWDVPAIPVHHMEGH
type: CONSERVED_SITE
name: Peptidase_M22_CS
description: Peptidase M22, conserved site

phrase: MRVLGIETSCDETGVAIYDTETGLLANQLYSQVKLHADYGGVVPELASRDHVRKTVPLIQAALREAGLQAGDIDGVAYTAGPGLVGALLVGATVGRSLAFAWDVPAIPVHHMEGHLLAPMLEDNPPAFPFVALLVSGGHTQLISVTGIGEYRLLGESIDDAAGEAFDKTAKLLGLDYPGGPMLSKMAQAGDSQRFTFPRPMTDRPGLDFSFSGLKTFAANTIRSNGDDDQTRADIARAFEDAVVDTLAIKCRRALDETGFKRLVMAGGVSANRTLRQCLGDVMAKRGGEVFYARPEFCTDNGAMIAYAGSVRLAHGASQTLGVSVRPRWPLA
type: DOMAIN
name: Gcp-like_dom
description: Gcp-like domain

phrase: LLANQLYSQVKLHADYGGVVPELASRDHVRKTVPLIQAALREAGLQAGDIDGVAYTAGPGLVGALLVGATVGRSLAFAWDVPAIPVHHMEGHLLAPMLEDNPPAFPFVALLVSGGHTQLISVTGIGEYRLLGESIDDAAGEAFDKTAKLLGLDYPGGPMLSKMAQAGDSQRFTFPRPMTDRPGLDFSFSGLKTFAANTIRSNGDDDQTRADIARAFEDAVVDTLAIKCRRALDETGFKRLVMAGGVSANRTLRQCLGDVMAKRGGEVFYARPEFCTDNGAMIA
type: DOMAIN
name: Gcp-like_dom
description: Gcp-like domain
Protein sequence:
MKVKEIRKNLQRLWKWGIMLLGMLMIFSAAAGQLWVTVYYGVPVWKEATTTLFCASDAKAYDTEAHNVWATHACVPTDPNPQEIVMGNVTENFNMWKNNMVEQMNEDIISLWDQSLKPCVKLTPLCVVLNCTDAKANNSSNNSSDWLKMEKGEIQNCSFNTTRIGNKIQKEYALFYKLDVVPIDQDNTSQQNNTSYTNQTKYTRYTLINCNTSVITQACPKISFEPIPIHYCAPAGFAILKCNNKKFNGSGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSENFTDNAKIIIVQLNETVRINCTRPNNNTRKSIHMGPGRAFYATGDIIGDIRQAHCNISKTEWNNTLRQIATKLAKQFNNRTIIFKQSSGGDPEIVMHSFNCGGEFFYCNTTQLFNSTWNSTQLLNSIESNNTGNITLPCRIRQIVNRWQEVGKAMYAPPISGQISCSSNITGLLLTRDGGNSSYNETETFRPGGGNMRDNWRSELYKYKVVRIEPLGVAPTRAKRRVVQREKRAVTLGAMSLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICTTTVPWNASWSNKSLDQIWNNMTWMEWEREIDNYTNTIYNLIEKSQIQQEKNEQELLELDKWASLWNWFDITSWLWYIKIFIMIIGGLVGLRIVFAVLSIVNRVRQGYSPLSFQARLPATEGPDRPEGIEEEGGERDRARSVRLVNGFLALIW

Annotated regions:
phrase: LWVTVYYGVPVWKEATTTLFCASDAKAYDTEAHNVWATHACVPTDPNPQEIVMGNVTENFNMWKNNMVEQMNEDIISLWDQSLKPCVKLTPLCVVLNCTDAKANNSSNNSSDWLKMEKGEIQNCSFNTTRIGNKIQKEYALFYKLDVVPIDQDNTSQQNNTSYTNQTKYTRYTLINCNTSVITQACPKISFEPIPIHYCAPAGFAILKCNNKKFNGSGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSENFTDNAKIIIVQLNETVRINCTRPNNNTRKSIHMGPGRAFYATGDIIGDIRQAHCNISKTEWNNTLRQIATKLAKQFNNRTIIFKQSSGGDPEIVMHSFNCGGEFFYCNTTQLFNSTWNSTQLLNSIESNNTGNITLPCRIRQIVNRWQEVGKAMYAPPISGQISCSSNITGLLLTRDGGNSSYNETETFRPGGGNMRDNWRSELYKYKVVRIEPLGVAPTRAKRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: MGAASITLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICTTTVPWNASWSNKSLDQIWNNMTWMEWEREIDNYTNTIYNLIEKSQIQQEKNEQELLELDKWASLWNWFDITSWLWYIKIFIMIIGGLVGLRIVFAVLSIVNRVRQGYSPLSFQ
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: VQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICTTTVPWNASWSNKSLDQIWNNMTWMEWEREIDNYTNTIYNLIEKSQIQQEKNEQELLELD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MQLPRNVIAGPGAIRSVGDLCRSMRLKGRGLIVTGKTTKQIAGDIVADSLREAGYGADFLLVENATMENVEKAEALARELKAEFLLGVGGGKSIDIAKIASTRLNMYYLSIPTAASHDGIASSRASIRHDGETVSMQAEAPLCVLADTSIIVRSPYKLLAAGCGDVISNYTAVLDWKLASRLRNIYFSEYAAALSQMTAEIVVNSAHMIRPGLEESAQEVVKALVSSSVAMSIAGSSAPASGSEHKFSHVLDRIAPKPALHGEQCGVGTILMMYLHGGDWEKIRDALNTIGAPVTAREMGIEDKYILQAMTEAHKIRPERYTILGDTGITLEAAEKVARATGVIE

Annotated regions:
Protein sequence:
MLFGFFRNLFRVLYRVRVTGDVRALQGNRVLITPNHVSFIDGMLLALFLPVRPVFAVYTSISQQWYMRWLTPLIDFVPLDPTKPMSIKHLMRLVEQGRPVVIFPEGRISVTGSLMKIYDGAGFVAAKSGATVIPLRIDGAELTPFSRLKGLVKRRLFPRIQLHILPPTQIPMPEAPRARDRRKIAGEMLHQIMMEARMAVRPRETLYESLLAAQYRYGAGKNCIEDINFTPDTYRKLLTKTLFVGRILEKYSVEGEKIGLMLPNAAISAAVIFGAVSRRRIPAMMNYTAGVKGLTSAIAAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDLKADVTLADKLWIFAHLLAPRLAQVKQQPEDAAIILFTSGSEGHPKGVVHSHKSILANVEQIKTIADFTANDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFANPYDFYRLRYVVAGAEKLQESTKQLWQDKFGLRILEGYGVTECAPVVSINVPMAAKPGTVGRILPGMDARLLAVPGIENGGRLQLKGPNIMNGYLRVEKPGVLEVPSAENARGETERGWYDTGDIVRFDENGFVQIQGRAKRFAKIAGEMVSLEMVEQLALGVSADKMHATAIKSDASKGEALVLFTTDSELTREKLQHYAREHGIPELAVPRDIRYLKQLPLLGSGKPDFVTLKSWVDAPEQHHE

Annotated regions:
phrase: ILFTSGSEGHP
type: CONSERVED_SITE
name: AMP-binding_CS
description: AMP-binding, conserved site

phrase: VLITPNHVSFIDGMLLALFLPVRPVFAVYTSISQQWYMRWLTPLIDFVPLDPTKPMSIKHLMRLVEQGRPVVIFPEGRISVTGSLMKIYDGAGFVAAKSGATVIPLRIDG
type: DOMAIN
name: Plipid/glycerol_acylTrfase
description: Phospholipid/glycerol acyltransferase

phrase: RVRVTGDVRALQGNRVLITPNHVSFIDGMLLALFLPVRPVFAVYTSISQQWYMRWLTPLIDFVPLDPTKPMSIKHLMRLVEQGRPVVIFPEGRISVTGSLMKIYDGAGFVAAKSGATVIPLR
type: DOMAIN
name: Plipid/glycerol_acylTrfase
description: Phospholipid/glycerol acyltransferase

phrase: TYRKLLTKTLFVGRILEKYSVEGEKIGLMLPNAAISAAVIFGAVSRRRIPAMMNYTAGVKGLTSAIAAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDLKADVTLADKLWIFAHLLAPRLAQVKQQPEDAAIILFTSGSEGHPKGVVHSHKSILANVEQIKTIADFTANDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARFANPYDFYRLRYVVAGAEKLQESTKQLWQDKFGLRILEGYGVTECAPVVSINVPMAAKPGTVGRILPGMDARLLAVPGIENGGRLQLKGPNIMNGY
type: DOMAIN
name: AMP-dep_synth/lig_dom
description: AMP-dependent synthetase/ligase domain
Protein sequence:
MMARPRNHRPSARKSSHSTLVFAVLIMSTFVILILLAFGILSVPSNNAGSSKANDLTSIVRKTLQRSGEDDSKNERWVEIISWEPRASVYHNFLTKEECKYLIELAKPHMEKSTVVDEKTGKSTDSRVRTSSGTFLARGRDKTIREIEKRISDFTFIPVEHGEGLQVLHYEIGQKYEPHYDYFMDEYNTRNGGQRIATVLMYLSDVEEGGETVFPAAKGNYSAVPWWNELSECGKGGLSVKPKMGDALLFWSMTPDATLDPSSLHGGCAVIKGNKWSSTKWLRVHEYKV

Annotated regions:
phrase: PRASVYHNFLTKEECKYLIELAKPHMEKSTVVDEKTGKSTDSRVRTSSGTFLARGRDKTIREIEKRISDFTFIPVEHGEGLQVLHYEIGQKYEPHYDYFMDEYNTRNGGQRIATVLMYLSDVEEGGETVFPAAKGNYSAVPWWNELSECGKGGLSVKPKMGDALLFWSMTPDATLDPSSLHGGCAVIKGNKWSSTKWL
type: DOMAIN
name: Pro_4_hyd_alph
description: Prolyl 4-hydroxylase, alpha subunit

phrase: HGEGLQVLHYEIGQKYEPHYDYFMDEYNTRNGGQRIATVLMYLSDVEEGGETVFPAAKGNYSAVPWWNELSECGKGGLSVKPKMGDALLFWSMTPDATLDPSSLHGGCAVIKGNKWSSTKWLR
type: DOMAIN
name: Oxoglu/Fe-dep_dioxygenase_dom
description: Oxoglutarate/iron-dependent dioxygenase domain

phrase: LQVLHYEIGQKYEPHYDYFMDEYNTRNGGQRIATVLMYLSDVEEGGETVFPAAKGNYSAVPWWNELSECGKGGLSVKPKMGDALLFWSMTPDATLDPSSLHGGCAVIKGNKWSSTKWL
type: DOMAIN
name: Pro_4_hyd_alph_FE2OG_OXY
description: Prolyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domain
Protein sequence:
MENSDDIRLIVKIAQLYYEQDMTQAQIARELGIYRTTISRLLKRGREQGIVTIAINYDYNENLWLEQQLKQKFGLKEAVVASSDGLLEEEQLSAMGQHGALLVDRLLEPGDIIGFSWGRAVRSLVENLPQRSQSRQVICVPIIGGPSGKLESRYHVNTLTYGAAARLKAESHLADFPALLDNPLIRNGIMQSQHFKTISSYWDSLDVALVGIGSPAIRDGANWHAFYGSEESDDLNARHVAGDICSRFYDINGGLVDTNMSEKTLSIEMAKLRQARYSIGIAMGEEKYSGILGALHGRYINCLVTNRETAELLLK

Annotated regions:
phrase: QLYYEQDMTQAQIARELGIYRTTISRLLKRGR
type: DOMAIN
name: RNA_pol_sigma70_r4
description: RNA polymerase sigma-70 region 4

phrase: SDDIRLIVKIAQLYYEQDMTQAQIARELGIYRTTISRLLKRGREQGIV
type: DOMAIN
name: ArsR-like_HTH
description: ArsR-like helix-turn-helix domain

phrase: DYNENLWLEQQLKQKFGLKEAVVASSDGLLEEEQLSAMGQHGALLVDRLLEPGDIIGFSWGRAVRSLVENLPQRSQSRQVICVPIIGGPSGKLESRYHVNTLTYGAAARLKAESHLADFPALLDNPLIRNGIMQSQHFKTISSYWDSLDVALVGIGSPAIRDGANWHAFYGSEESDDLNARHVAGDICSRFYDINGGLVDTNMSEKTLSIEMAKLRQARYSIGIAMGEEKYSGILGALHGRYINCLVTNRETAELLL
type: DOMAIN
name: Sugar-bd_dom_put
description: Sugar-binding domain, putative
Protein sequence:
MNKHTTLPNLMQKLVSDEEIQLIAEAVGYRDSSRTFTLRELIHFFLLAAMHQWKSFRHGADVGPLYGLPRFHYSTVSKKAKEVPYDIMKRLLALIISKCNRQTRRSLRFPKPLRVVDSTTVTVGKNRLPWAPYHGERAGVKLHVAYSPEFSLPADVVETTGLRHDGPVGEQLTNAQQVLVEDRAYFKIERLDRFVEQHQLFVIRMKDNIELHQKKSLNRLSSTSSSVQTDFTCQLGTKQCRSTKRHRVVIFRDANGRDIRVVTNLFHASAETIADMYQQRWAVEVFFRWVKQYLNVPTLFGTTENAVYNQLFAAFIAYVLLRWLYDQTKKQTNVSLSFISFVRRFFSGQLPLDWKSGMAAALFEYAQIYGRRMYNFG

Annotated regions:
phrase: PKPLRVVDSTTVTVGKNRLPWAPYHGERAGVKLHVAYSPEFSLPADVVETTGLRHDGPVGEQLTNAQQVLVEDRAYFKIERLDRFVEQHQLFVIRMKDNIELHQKKSLNRLSSTSSSVQTDFTCQLGTKQCRSTKRHRVVIFRDANGRDIRVVTNLFHASAETIADMYQQRWAVEVFFRWVKQYLNVPTLFGTTENAVYNQLFAAFIAYV
type: DOMAIN
name: Transposase_11
description: Transposase IS4-like domain
Protein sequence:
MSNIDFLPISKEDLKKRNIDVLDFIIVTGDAYVDHPSFGTAIIGRVLEREGFTVGIIAQPNWNNIEDFKKLGKPKYGFLVNSGNIDSMVNHYTASKKKRHDDFYSPGGKSGYRPDRAVIVYCNKIKEAFKDSPIIIGGIEASLRRFAHYDYWDNSVRRSILEDSSADLLIYGMGEKPIVQVSNLLRYGMKIDSIKNVRGTTYIEKDISSLKDYIEIPSFEEVSTNKKSYAEAYKIQYYEQDSIRGKTLVQKHKERYVVQNPPQPPLSQEEMDEVYALPYARTYHPMYEAEGGIPAIKEVKFSITSHRGCYGSCSFCALTFHQGRVIQNRSQDSILKEANMMTNMKDFKGYIHDVGGPTANFRHRACKVQEKHGTCKNKQCVFPKACKNLIVDHKEYLSLLRKIRKIPNVKKVFIRSGIRFDYLMYDKNDEFFKELCEHHISGQLKVAPEHISDKVLNLMGKPTRNVYDSFVKKYYDINKKIHKNQFLVPYLMSSHPGSDLKAAIELAQYIKKMGYTPEQVQDFYPTPGSLSTTMYYTGINPLTEEKVYIPKDQKEKRMQRALLQFSIHDNYDLVKEALIKAHREDLIGNGPDCLIPYNKPYKKSHKKNNAKNNNNHYNKNNNYNKNKDISKKNKKNSLSKHKKRK

Annotated regions:
phrase: NIDFLPISKEDLKKRNIDVLDFIIVTGDAYVDHPSFGTAIIGRVLEREGFTVGIIAQPNWNNIEDFKKLGKPKYGFLVNSGNIDSMVNHYTASKKKRHDDFYSPGGKSGYRPDRAVIVYCNKIKEAFKDSPIIIGGIEASLRRFAHYDYWDNSVRRSILEDSSADLLIYGMGEKPIVQVSNLLRYGMKIDSIKNVRGTTYIEKDISSLKDYIEIPSFEEVSTNKKSYAEAYKIQYYEQDSIRGKTLVQKHKERYVVQNPPQPPLSQEEMDEVYALPYARTYHPMYEAEGGIPAIKEVKFSITSHRGCYGSCSFCALTFHQGRVIQNRSQDSILKEANMMTNMKDFKGYIHDVGGPTANFRHRACKVQEKHGTCKNKQCVFPKACKNLIVDHKEYLSLLRKIRKIPNVKKVFIRSGIRFDYLMYDKNDEFFKELCEHHISGQLKVAPEHISDKVLNLMGKPTRNVYDSFVKKYYDINKKIHKNQFLVPYLMSSHPGSDLKAAIELAQYIKKMGYTPEQVQDFYPTPGSLSTTMYYTGINPLTEEKVYIPKDQKEKRMQRALLQFSIHDNYDLVKEALIKAHREDLIGNGPDCLIPYNKPYKKSHKKNNAKNNNNHYNKN
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: FLPISKEDLKKRNIDVLDFIIVTGDAYVDHPSFGTAIIGRVLEREGFTVGIIAQPNWNNIEDFKKLGKPKYGFLVNSGNIDSMVNHYTASKKKRHDDFYSPGGKSGYRPDRAVIVYCNKIKEAFKDSPIIIGGIEASLRRFAHYDYWDNSVRRSILEDSSADLLIYGMGEKPIVQVSNLLRYGMKIDSIKNVRGTTYIEKDISSLKDYIEIPSFEEVSTNKKSYAEAYKIQYYEQDSIRGKTLVQKHKERYVVQNPPQPPLSQEEMDEVYALPYARTYHPMYEAEGGIPAIKEVKF
type: DOMAIN
name: UPF0313_N
description: UPF0313, N-terminal

phrase: AIKEVKFSITSHRGCYGSCSFCALTFHQGRVIQNRSQDSILKEANMMTNMKDFKGYIHDVGGPTANFRHRACKVQEKHGTCKNKQCVFPKACKNLIVDHKEYLSLLRKIRKIPNVKKVFIRSGIRFDYLMYDKNDEFFKELCEHHISGQLKVAPEHISDKVLNLMGKPTRNVYDSFVKKYYDINKKIHKNQFLVPYLMSSHPGSDLKAAIELAQYIKKMGYTPEQVQDFYPTPGSLSTTMYYTGINPLTEEKVYIPKDQKEKRMQRALLQF
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VKFSITSHRGCYGSCSFCALTFHQGRVIQNRSQDSILKEANMMTNMKDFKGYIHDVGGPTANFRHRACKVQEKHGTCKNKQCVFPKACKNLIVDHKEYLSLLRKIRKIPNVKKVFIRSGIRFDYLMYDKNDEFFKELCEHHISGQLKVAPEHISDKVLNLMGKPTRNVYDSFVKKYYDINKKIHKNQFLVPYLMSSHPGSDLKAAIELAQYIKKMGYTPEQVQDFYPTPGSLSTTMYYTGINPLTEEKVYI
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: EQVQDFYPTPGSLSTTMYYTGINPLTEEKVYIPKDQKEKRMQRALLQFSIHDNYDLVKEALIKAHREDLIGNGPDCLIPYNKPYKKSHKKNNAKNNNNHYNKNNNYNKNKDISKKNKKNSLSKH
type: DOMAIN
name: UPF0313_C
description: UPF0313, C-terminal

phrase: SHRGCYGSCSFCALTFHQGRVIQNRSQDSILKEANMMTNMKDFKGYIHDVGGPTANFRHRACKVQEKHGTCKNKQCVFPKACKNLIVDHKEYLSLLRKIRKIPNVKKVFIRSGIRFDYLMYDKNDEFFKELCEHHISGQLKVAPEHISDKVLNLMGKPTRNVYDSFVKKYYDINK
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MTAPPPVLTRIDLRGAELTAAELRAALPRGGADVEAVLPTVRPIVAAVAERGAEAALDFGASFDGVRPHAIRVPDAALDAALAGLDCDVCEALQVMVERTRAVHSGQRRTDVTTTLGPGATVTERWVPVERVGLYVPGGNAVYPSSVVMNVVPAQAAGVDSLVVASPPQAQWDGMPHPTILAAARLLGVDEVWAVGGAQAVALLAYGGTDTDGAALTPVDMITGPGNIYVTAAKRLCRSRVGIDAEAGPTEIAILADHTADPVHVAADLISQAEHDELAASVLVTPSEDLADATDAELAGQLQTTVHRERVTAALTGRQSAIVLVDDVDAAVLVVNAYAAEHLEIQTADAPQVASRIRSAGAIFVGPWSPVSLGDYCAGSNHVLPTAGCARHSSGLSVQTFLRGIHVVEYTEAALKDVSGHVITLATAEDLPAHGEAVRRRFER

Annotated regions:
phrase: IDAEAGPTEIAILADHTADPVHVAADLISQAE
type: CONSERVED_SITE
name: Histidinol_DH_CS
description: Histidinol dehydrogenase, conserved site
Protein sequence:
MSRKQLALFEPTLVVQALKEAVKKLNPQAQWRNPVMFIVWIGSLLTTCISIAMASGAMPGNALFSAAISGWLWITVLFANFAEALAEGRSKAQANSLKGVKKTAFARKLREPKYGAVADKVPADQLRKGDIVLVEAGDIIPCDGEVIEGGASVDESAITGESAPVIRESGGDFASVTGGTRILSDWLVIECSVNPGETFLDRMIAMVEGAQRRKTPNEIALTILLIALTIVFLLATATLWPFSAWGGNAVSVTVLVALLVCLIPTTIGGLLSAIGVAGMSRMLGANVIATSGRAVEAAGDVDVLLLDKTGTITLGNRQASEFIPAQGVDEKTLADAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGINIDNRMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGSRVLGVIALKDIVKGGIKERFAQLRKMGIKTVMITGDNRLTAAAIAAEAGVDDFLAEATPEAKLALIRQYQAEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEAGNMVDLDSNPTKLIEVVHIGKQMLMTRGSLTTFSIANDVAKYFAIIPAAFAATYPQLNALNIMCLHSPDSAILSAVIFNALIIVFLIPLALKGVSYKPLTASAMLRRNLWIYGLGGLLVPFIGIKVIDLLLTVCSLV

Annotated regions:
phrase: DKTGTI
type: PTM
name: ATPase_P-typ_P_site
description: P-type ATPase, phosphorylation site

phrase: NVIATSGRAVEAAGDVDVLLLDKTGTITLGNRQASEFIPAQGVDEKTLADAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGINIDNRMIRKGSVDAIRRHVEANGGHFPTDVDQKVDQVARQGATPLVVVEGSRVLGVIALKDIVKGGIKERFAQLRKMGIKTVMITGDNRLTAAAIAAEAGVDDFLAEATPEAKLALIRQYQAEGRLVAMTGDGTNDAPALAQADVAVAMNSGTQAAKEAGNMVDLDSNPTKLIEVVHIGK
type: DOMAIN
name: P_typ_ATPase_HD_dom
description: P-type ATPase, haloacid dehalogenase domain
Protein sequence:
MQLNEFASLLKTSQIVGDETVEVSGVQIDSRKIKPGDLFICISGLVSDGHDFARKAVDNGAVALVVERRLDVNVPQILVKETRHAMALFAAHFYGYPAHDMKIIGVTGTNGKTTTTYLIEQILRDQGFITGLMGTIQVKIGSEYYGVERTTQEALDIQKNLAAMREKDTDYCVMEVSSHALDFGRVKGIPFRSGVFTNLTQDHLDYHKTMDNYRLAKAQLFSRMGNDFVQDEKQRSYAILNVDDEASETFQRLTSAEVITYGIEKECDVRASNIRITAEGTEFTLTTFEGTENIRMKLVGKFNVYNALGAIAATLAEGISLEAIKKSLAEVDSVPGRMEVVSEGQDYLVLVDYAHTPDGLENALSTVKEFAEGHVYCVFGCGGDRDRTKRPLMGKVTGKYSDHLFVTSDNPRTEDPAAILEDIVPGIVEAGLSEDRFELIVDRRLAIQKAIEVASPKDVVLIAGKGHETYQDIMNVKHDFDDRLVAKEAIRSKQK

Annotated regions:
phrase: VTGTNGKTTTTYLIEQILRDQGFITGLMGTIQVKIGSEYYGVERTTQEALDIQKNLAAMREKDTDYCVMEVSSHALDFGRVKGIPFRSGVFTNLTQDHLDYHKTMDNYRLAKAQLFSRMGNDFVQDEKQRSYAILNVDDEASETFQRLTSAEVITYGIEKECDVRASNIRITAEGTEFTLTTFEGTENIRMKLVGKFNVYNALGAIA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: IGVTGTNGKTTTTYLIEQILRDQ
type: CONSERVED_SITE
name: Folylpolyglutamate_synth_CS
description: Folylpolyglutamate synthetase, conserved site

phrase: EVSGVQIDSRKIKPGDLFICISGLVSDGHDFARKAVDNGAVALVVERRLDVNVPQILVKETRHAMALFAAHF
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: GRMEVVSEGQDYLVLVDYAHTPDGLENALSTVKEFAEGHVYCVFGCGGDRDRTKRPLMGKVTGKYSDHLFVTSDNPRTEDPAAILEDIVPGIVEAGLSEDRFELIVDRRLAIQKAIEVASPKDVVLIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MSVIETATVPLAQQQADALLNVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEHELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKNMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLVVVAGICDKVLVMYAGRTMEYGNARDVFYQPVHPYSIGLLNAVPRLDAEGETMLTIPGNPPNLLRLPKGCPFQPRCPHAMEICSSAPPLEEFTPGRLRACFKPVEELL

Annotated regions:
phrase: FSGGMRQRVMIAMA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: AGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEHELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKNMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLVVVAGICDKVLVMYAGRTMEYGNA
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEHELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKNMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPT
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: MEYGNARDVFYQPVHPYSIGLLNAVPRLDAEGETMLTIPGNPPNLLRLPKGCPFQPRCPHAMEI
type: DOMAIN
name: Oligopep_ABC_C
description: Oligopeptide/dipeptide ABC transporter, C-terminal

phrase: MEYGNARDVFYQPVHPYSIGLLNAVPRLDAEGETMLTIPGNPPNLLRLPKGCPFQPRCPHAMEICSSAPPLEEFTPGRLRAC
type: DOMAIN
name: Oligopep_ABC_C
description: Oligopeptide/dipeptide ABC transporter, C-terminal

phrase: LNVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEHELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKNMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLVVVAGICDKVLVMYAGRTMEYGNARDVFYQPVHPYSIGL
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain
Protein sequence:
MEKKNLKSMDLNELTEYVRTLGEKDFRARQIYRWIYKGVSDFESMSDLPKNLIVQLKKYAYISEIKILKKVDSKKDKTSKYIFLLEDGNIIESVKMEYSYGVSVCVSSQVGCAMGCAFCASTLGGIVRNLEAWEMVDQILQIEKQINKRVSHVVVMGSGEPLLNYTELIKFLRLLNNPLGLNISLRKVTVSTCGIVPYIYKLAEENMPITLSISLHAPFDDLRNKLMPINRKYNISQLLEACNFYIMKTKRRISFEYILISGVNDGEECAKKLADLLRGMLCHVNLIPLNPVKEKLFKGSDPRAIRRFEKVLEENRIPITIRAKMGSDIEAACGQLRWSLLKEVEG

Annotated regions:
phrase: YSYGVSVCVSSQVGCAMGCAFCASTLGGIVRNLEAWEMVDQILQIEKQINKRVSHVVVMGSGEPLLNYTELIKFLRLLNNPLGLNISLRKVTVSTCGIVPYIYKLAEENMPITLSISLHAPFDDLRNKLMPINRKYNISQLLEACNFYIMKTKRRISFEYILISGVNDGEECAKKLADLLRGMLCHVNLIPLNPVKEKLFKGSDPRAIRRFEKVLEENRIPITIRAKMGS
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VSVCVSSQVGCAMGCAFCASTLGGIVRNLEAWEMVDQILQIEKQINKRVSHVVVMGSGEPLLNYTELIKFLRLLNNPLGLNISLRKVTVSTCGIVPYIYKLAEENMPITLSISLHAPFDDLRNKLMPINRKYNISQLLEACNFYIMKTKRRISFEYILISGVNDGEECAKKLADLLRGMLCHVNLIPLNPVKEKLFKGSDPRAIRRFEKVL
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: SSQVGCAMGCAFCASTLGGIVRNLEAWEMVDQILQIEKQINKRVSHVVVMGSGEPLLNYTELIKFLRLLNNPLGLNISLRKVTVSTCGIVPYIYKLAEENMPITLSISLHAPFDDLRNKLMPINRKYNISQLLEACNFYIMKTKRRISFEYILISGVNDG
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: NLKSMDLNELTEYVRTLGEKDFRARQIYRWIYKGVSDFESMSDLPKNLIVQLKKYAY
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: EKKNLKSMDLNELTEYVRTLGEKDFRARQIYRWIYKGVSDFESMSDLPKNLIVQLKKYAYISEIKILKKVDSKKDKTSKYIFLLEDGNIIESVKMEYSYGVSVCVSSQVGCAMGCAFCASTLGGIVRNLEAWEMVDQILQIEKQINKRVSHVVVMGSGEPLLNYTELIKFLRLLNNPLGLNISLRKVTVSTCGIVPYIYKLAEENMPITLSISLHAPFDDLRNKLMPINRKYNISQLLEACNFYIMKTKRRISFEYILISGVNDGEECAKKLADLLRGMLCHVNLIPLNPVKEKLFKGSDPRAIRRFEKVLEENRIPITIRAKMGSDIEAACGQLRW
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MSVTDLVLVVFIALLLIYAIYDEFIMNMMKGKTRLQVHLKRKNKLDCMIFVGLIGILIYNNVMAHGAPLTTYLLVGLALVAVYISYIRWPKLLFKNTGFFYANTFIEYSRIKSMNLSEDGILVIDLEQRRLLIQVKKLDDLEKIYNFFIENQS

Annotated regions:
Protein sequence:
MKAPIEVSPLAWLDAVEQQRRAAGLRRSLRPRPPVATELDLASNDYLGLSQHPDVIDGGVAALRLWGAGATGSRLVTGDTELHQQFESELADYVGAASGLLFSSGYAANLGAVVGLSGRGALVVSDAYSHASLVDACRLSRARVVVTPHRDVDAVLAALADRDEERAVVITESVFSTDGALAPLRELHEVCRRHRALLIVDEAHGLGVRGGGRGLVFEAGLAGAPDVVMTTTLSKALGSQGGAVLGPAAVRAHLIDAARTFIFDTGLAPAAVGAARAALGVLRAEPWRVGAVLRHAGVLAEVCRVREVPQSAVVSVILGDPDVAVAAATACLDAGVRVGCFRPPTVPAGTSRLRLTARASLDDAELEVARRVLTDVLAGLG

Annotated regions:
phrase: TLSKALGSQ
type: BINDING_SITE
name: Aminotrans_II_pyridoxalP_BS
description: Aminotransferase, class-II, pyridoxal-phosphate binding site

phrase: LDLASNDYLGLSQHPDVIDGGVAALRLWGAGATGSRLVTGDTELHQQFESELADYVGAASGLLFSSGYAANLGAVVGLSGRGALVVSDAYSHASLVDACRLSRARVVVTPHRDVDAVLAALADRDEERAVVITESVFSTDGALAPLRELHEVCRRHRALLIVDEAHGLGVRGGGRGLVFEAGLAGAPDVVMTTTLSKALGSQGGAVLGPAAVRAHLIDAARTFIFDTGLAPAAVGAARAALGVLRAEPWRVGAVLRHAGVLAEVCRVREVPQSAVVSVILGDPDVAVAAATACLDAGVRVGCFRPPTVPAGTSRLRLTARASLDDAELEVAR
type: DOMAIN
name: Aminotransferase_I/II_large
description: Aminotransferase, class I/classII, large domain
Protein sequence:
MYIRDLDVRDFRSWPELTLRLKPGITLFVGRNGFGKTNIVEAIGYTAHLSSHRVAHDAPLVRQGAHNARISATAVNQGRELTAHLLIKPHAANQAQINRTRLKSPRELLGVVKTVLFSPEDLSLVRGEPAARRQYLDDIIASRTPRLAGVKADYDKVLKQRNALLKSASPSLRRGYSDSDGASALATLDVWDTQLSSLGAQVIQARLALVDELRELIPAAYAGLAPESRPAAIDYKSTVDISDREVIEAMMLTELATKRQREIERGISLVGPHRDDLVLNLGTSPAKGFASHGETWSYAISLRLAEFNLLRQDGTDPILILDDVFAELDAKRREKLVRLAAGAEQVLITAAVDEDLPGNLQPIERFTVTVRDTDEGRISEIAPYTAGGDEDD

Annotated regions:
phrase: ILILDDVFAELDAKRREK
type: CONSERVED_SITE
name: DNA-binding_RecF_CS
description: DNA-binding, RecF, conserved site

phrase: FSPEDLSLVRGEPAARRQYL
type: CONSERVED_SITE
name: DNA-binding_RecF_CS
description: DNA-binding, RecF, conserved site

phrase: YIRDLDVRDFRSWPELTLRLKPGITLFVGRNGFGKTNIVEAIGYTAHLSSHRVAHDAPLVRQGAHNARISATAVNQGRELTAHLLIKPHAANQAQINRTRLKSPRELLGVVKTVLFSPEDLSLVRGEPAARRQYLDDIIASRTPRLAGVKADYDKVLKQRNALLKSASPSLRRGYSDSDGASALATLDVWDTQLSSLGAQVIQARLALVDELRELIPAAYAGLAPESRPAAIDYKSTVDISDREVIEAMMLTELATKRQREIERGISLVGPHRDDLVLNLGTSPAKGFASHGETWSYAISLRLAEFNLLRQDGTDPILILDDVFAELDAKRREKLVRLAAGAEQVLITA
type: DOMAIN
name: RecF/RecN/SMC_N
description: RecF/RecN/SMC, N-terminal
Protein sequence:
MKKSFIHQQEEISFVKNTFTQYLIAKLDVVEVQGPILSRVGDGMQDNLSGTENPVSVNVLKIPNATFEVVHSLAKWKRHTLARFGFNEGEGLVVNMKALRPDEDSLDQTHSVYVDQWDWEKVIPDGKRNLAYLKETVETIYKVIRLTELAVEARYDIEAVLPKKITFIHTEELVAEYPDLTPKERENAITKEFGAVFLIGIGGVLPDGKPHDGRAPDYDDWTTETENGYHGLNGDILVWNDQLGSAFELSSMGIRVDEEALKRQVEMTGDQDRLAFDWHKSLLNGLFPLTIGGGIGQSRMVMFLLRKKHIGEVQTSVWPQEVRDSYDNIL

Annotated regions:
phrase: SFVKNTFTQYLIAKLDVVEVQGPILSRVGDGMQDNLSGTENPVSVNVLKIPNATFEVVHSLAKWKRHTLARFGFNEGEGLVVNMKALRPDEDSLDQTHSVYVDQWDWEKVIPDGKRNLAYLKETVETIYKVIRLTELAVEARYDIEAVLPKKITFIHTEELVAEYPDLTPKERENAITKEFGAVFLIGIGGVLPDGKPHDGRAPDYDDWTTETENGYHGLNGDILVWNDQLGSAFELSSMGIRVDEEALKRQVEMTGDQDRLAFDWHKSLLNGLFPLTIGGGIGQSRMVMFLLRKKHIGEVQTSVW
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II
Protein sequence:
MDGTVLVADDDRTIRTVLTQALTRAGCKVHATASLMTLMRWVEEGKGDLVISDVVMPDGNGLEALPRIARERPGLPVIVISAQNTIMTAIQAAEADAYDYLPKPFDLPDLMKRAARALELKRRAQVVPKVIETSRPEGTDLPLVGRTAAMQALYRLVARVMNADLPVMIMGESGTGKSLIAKAIHDFSDRRTLPFVVAQAADLLGADGPSSLLARVKGGSLVFDEVGDYDDETQGRIVRMLDALPDPAPRIMATTQVDLGALMEAGRFRQDLYYRLGGVTLAVPALRERVEDIPLLAEHFLGRAERDGLGMRRFSAEAMGLVRAYAWPGNVRQLENTVRRLVVTASEEEITRTEVEFVLGNQPAVDALRGAGGEGEKLSASIARHLRRYFDLHGGNLPPPGLYDRILAEMEAPLIEIALDATGGNQAKCADLLGINRNTLRKKITDLDIQVTRRRKLM

Annotated regions:
phrase: VMIMGESGTGKSL
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_1
description: Sigma-54 interaction domain, ATP-binding site 1

phrase: LAEMEAPLIEIALDATGGNQAKCADLLGINRNTLRKKI
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: PLIEIALDATGGNQAKC
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: ADLLGINRNTLRKKITDLDI
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: VLVADDDRTIRTVLTQALTRAGCKVHATASLMTLMRWVEEGKGDLVISDVVMPDGNGLEALPRIARERPGLPVIVISAQNTIMTAIQAAEADAYDYLPKPFDLPDLMKR
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: GTVLVADDDRTIRTVLTQALTRAGCKVHATASLMTLMRWVEEGKGDLVISDVVMPDGNGLEALPRIARERPGLPVIVISAQNTIMTAIQAAEADAYDYLPKPFDLPDLMKR
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: WPGNVRQLE
type: CONSERVED_SITE
name: Sigma_54_int_dom_CS
description: Sigma-54 interaction domain, conserved site

phrase: TVLVADDDRTIRTVLTQALTRAGCKVHATASLMTLMRWVEEGKGDLVISDVVMPDGNGLEALPRIARERPGLPVIVISAQNTIMTAIQAAEADAYDYLPKPFDLPDLMKRAARA
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: VGRTAAMQALYRLVARVMNADLPVMIMGESGTGKSLIAKAIHDFSDRRTLPFVVAQAADLLGADGPSSLLARVKGGSLVFDEVGDYDDETQGRIVRMLDALPDPAPRIMATTQVDLGALMEAGRFRQDLYYRLGGVTLAVPA
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: LVGRTAAMQALYRLVARVMNADLPVMIMGESGTGKSLIAKAIHDFSDRRTLPFVVAQAADLLGADGPSSLLARVKGGSLVFDEVGDYDDETQGRIVRMLDALPDPAPRIMATTQVDLGALMEAGRFRQDLYYRLGGVTLAVPALRERVEDIPLLAEHFLGRAERDGLGMRRFSAEAMGLVRAYAWPGNVRQLENTVRRLV
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: ADLPVMIMGESGTGKSLIAKAIHDFSDRRTLPFVVAQAADLLGADGPSSLLARVKGGSLVFDEVGDYDDETQGRIVRMLDALPDPAPRIMATTQVDLGALMEAGRFRQDLYYRLG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain