nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MNPSPLSIHSALSSDALRIDAAAEVDRIAQAMRDQVRNKMRRRGLVIGLSGGVDSSVCAALAAYALGAQNVFAIFMPENDSDPESLSLGQEVAKAFSLEGAIEDIGSALAAMGCYERRDDFIRQVEPAYGSGWSCKVVISSPLAGEGYALSTLVLQAPDGSQTRHRMPASVYLGIVAATNMKQRTRKQMEYYHADRLNYAVLGTPNRLEYDQGFFVKNGDGAADLKPIAHLYKSQVYQIAEYLGVPEEVRRRPPTTDTWSLTQTQEEFYFALPYDRMDLCLHALNEGLGVEETAKATQLTTDQVERVWLDIHSKRKATRPLHLAPLLVQPVF

Annotated regions:
phrase: VDRIAQAMRDQVRNKMRRRGLVIGLSGGVDSSVCAALAAYALGAQNVFAIFMPENDSDPESLSLGQEVAKAFSLEGAIEDIGSALAA
type: DOMAIN
name: NAD/GMP_synthase
description: NAD/GMP synthase

phrase: VAATNMKQRTRKQMEYYHADRLNYAVLGTPNRLEYDQGFFVKNGDGAADLKPIAHLYKSQVYQIAEYLGVPEEVRRRPPTTDTWSLTQTQEEFYFALPYDRMDLCLHALNEGLGVEETAKATQLTTDQVERV
type: DOMAIN
name: NAD/GMP_synthase
description: NAD/GMP synthase
Protein sequence:
MKVAAKKLATSRMRKDRAAAASPSSDIENSENPSSLASHSSSSGRMTPSKNTRSRKGVSVKDVSNHKITEFFQVRRSNRKTSKQISDEAKHALRDTVLKGTNERLLEVYKDVVKGRGIRTKVNFEKGDFVVEYRGVMMEYSEAKVIEEQYSNDEEIGSYMYFFEHNNKKWCIDATKESPWKGRLINHSVLRPNLKTKVVEIDGSHHLILVARRQIAQGEELLYDYGDRSAETIAKNPWLVNT

Annotated regions:
phrase: GRGIRTKVNFEKGDFVVEYRGVMMEYSEAKVIEEQYSNDEEIGSYMYFFEHNNKKWCIDATKESPWKGRLINHSVLRPNLKTKVVEIDGSHHLILVARRQIAQGEELLYDY
type: DOMAIN
name: SET_dom
description: SET domain

phrase: DEAKHALRDTVLKGTNERLLEVYKDVVKGRGIRTKVNFEKGDFVVEYRGVMMEYSEAKVIEEQYSNDEEIGSYMYFFEHNNKKWCIDATKESPWKGRLINHSVLRPNLKTKVVEIDGSHHLILVARRQIAQGEELLYDYGD
type: DOMAIN
name: KMT5A-like_SET
description: N-lysine methyltransferase KMT5A-like, SET domain

phrase: RLLEVYKDVVKGRGIRTKVNFEKGDFVVEYRGVMMEYSEAKVIEEQYSNDEEIGSYMYFFEHNNKKWCIDATKESPWKGRLINHSVLRPNLKTKVVEIDGSHHLILVARRQIAQGEELLYDY
type: DOMAIN
name: SET_dom
description: SET domain

phrase: RLLEVYKDVVKGRGIRTKVNFEKGDFVVEYRGVMMEYSEAKVIEEQYSNDEEIGSYMYFFEHNNKKWCIDATKESPWKGRLINHSVLRPNLKTKVVEIDGSHHLILVARRQIAQGEELLYDYGDRSAE
type: DOMAIN
name: SET_dom
description: SET domain
Protein sequence:
MVCLKTLSVFLAAFAAADARAVFKTQSSNKADIIPDSYIVVMKNGVSHDDFKAHVSSVSQIHSNNKAKRGTNTNGMQREFDIMNWRGYHGHFDPDTLDEILNDSKVDYVEHDQIVRISGLVTQRSAPSWGLGRVSHRQAGIRDYVFDDSAGRGVTIYGVDTGIDINHQDFRGRARWGTNTADRDNADRHGHGTHTASTFAGTTYGIAKNANIVAVKVLGSDGSGSTSGIIAGINFCVQDAQSRGILGKAAMNLSLGGGFSQANNDAVTRAQNAGIFVAVAAGNDNKDARNYSPASAPAVCTVASSTVNDSKSSFSNYGSIVDIYAPGSDIIAARPGGGSTTMSGTSMASPHVAGMGAYMIGMGIDPRQVCDRLKQISLPAIRSPGPSTTNRLLYNGSGQ

Annotated regions:
phrase: GRGVTIYGVDTGIDINHQDFRGRARWGTNTADRDNADRHGHGTHTASTFAGTTYGIAKNANIVAVKVLGSDGSGSTSGIIAGINFCVQDAQSRGILGKAAMNLSLGGGFSQANNDAVTRAQNAGIFVAVAAGNDNKDARNYSPASAPAVCTVASSTVNDSKSSFSNYGSIVDIYAPGSDIIAARPGGGSTTMSGTSMASPHVAGMGAYM
type: DOMAIN
name: Peptidase_S8/S53_dom
description: Peptidase S8/S53 domain

phrase: SYIVVMKNGVSHDDFKAHVSSVSQIHSNNKAKRGTNTNGMQREFDIMNWRGYHGHFDPDTLDEILNDSKVDYVEHDQIVR
type: DOMAIN
name: S8pro/Inhibitor_I9
description: Peptidase S8 propeptide/proteinase inhibitor I9

phrase: WGLGRVSHRQAGIRDYVFDDSAGRGVTIYGVDTGIDINHQDFRGRARWGTNTADRDNADRHGHGTHTASTFAGTTYGIAKNANIVAVKVLGSDGSGSTSGIIAGINFCVQDAQSRGILGKAAMNLSLGGGFSQANNDAVTRAQNAGIFVAVAAGNDNKDARNYSPASAPAVCTVASSTVNDSKSSFSNYGSIVDIYAPGSDIIAARPGGGSTTMSGTSMASPHVAGMGAYMIGMGIDPRQVCDRLKQISL
type: DOMAIN
name: PCSK9_ProteinaseK-like
description: Proteinase K-like catalytic domain

phrase: GTSMASPHVA
type: ACTIVE_SITE
name: Peptidase_S8_Ser-AS
description: Peptidase S8, subtilisin, Ser-active site
Protein sequence:
MKNYKGYLIDLDGTMYLGTDEIDGAAQFIDYLNNHQIPHLYVTNNSTKTPEEVTQKLKEMNIDAKPEEVVTSALATANYISDEKSDATVYMLGGNGLRTALTEAGLTVKDDENVDYVAIGLDENVTYEKLAVATLAVRKGARFISTNPDVSIPKERGFLPGNGAITSVVSVSTGQAPQFIGKPEPVIMDIALDILKLDKSDVAMVGDLYDTDIMSGINVGVDTIHVQTGVTTYEELKEKDQQPTYSFKDLNVAISELEKNAQK

Annotated regions:
Protein sequence:
MSIDVPERADLEQVRGRWRNAVAGVLSKSNRTDSAQLGDHPERLLDTQTADGFAIRALYTAFDELPEPPLPGQWPFVRGGDPLRDVHSGWKVAEAFPANGATADTNAAVLAALGEGVSALLIRVGESGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSIDLGADPLTASLRDRPAPPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAATELAATVAAAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGGGAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAGFARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAHDFLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPGDPTSPVRRYAAGFEALRDRSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIEAIDPGTVDAGTVGNAVADAGSPSVAVICGTDARYRDEVADIVQAARAAGVSRVYLAGPEKALGDAAHRPDEFLTAKINVVQALSNLLTRLGA

Annotated regions:
phrase: RIARNTQLLLLEESHVGRVLDPAGG
type: DOMAIN
name: MeMalonylCoA_mutase_a/b_cat
description: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic

phrase: QTADGFAIRALYTAFDELPEPPLPGQWPFVRGGDPLRDVHSGWKVAEAFPANGATADTNAAVLAALGEGVSALLIRVGESGVAPDRLTALLSGVYLNLAPVILDAGADYRPACDVMLALVAQLDPGQRDTLSIDLGADPLTASLRDRPAPPIEEVVAVASRAAGERGLRAITVDGPAFHNLGATAATELAATVAAAVAYLRVLTESGLVVSDALRQISFRLAADDDQFMTLAKMRALRQLWARVAEVVGDPGGGAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADTVLVHPFDVAIPGGFPGTAAGFARRIARNTQLLLLEESHVGRVLDPAGGSWFVEELTDRLARRAWQRFQAIEARGGFVEAHDFLAGQIAECAARRADDIAHRRLAITGVNEYPNLGEPALPPGDPTSPVRRYAAGFEALRDRSDHHLARTGARPRVLLLPLGPLAEHNIRTTFATNLLASGGIE
type: DOMAIN
name: MeMalonylCoA_mutase_a/b_cat
description: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic
Protein sequence:
MASFLHNFLLFFCSLSLIILTSSATKSQTHVPIRPNKLVLKVQKDRATNLHVVQIHKRTPLVQFPFVIDLTGRFLSVNCENQYTSSTYKAPVCHSSQCARANSHTCRTCSSSKTRPGCHTNACGLLTTNPVTQQSAQGELAEDVLKIPSTQGSSPGPMVTYPHFLFACAPSNILQKGLPKNVQGVAGLGHSPISLPYQLASHFGFPPKFAVCLTSSPGKNGAVFFGEGPYFMKPGIDVSRQLTYAPFTIGQQGEYYINVQSFKINNAMLPSIPKGGFGGAMISTTTPYTTLQTPIFRALNQLFMNQLRGVPHVKPVAPFGACFDANRIPTSKMGPTVPSIDLVLDNKKNIMWRIFGANAMIQPRPGVMCLAFVDGGMRPKAPIVIGTQQLEDNLLQFDLMNSRLGFSSSLLFRRTNCANFNFGTSSTNTDP

Annotated regions:
phrase: VVQIHKRTPLVQFPFVIDLTGRFLSVNCENQYTSSTYKAPVCHSSQCARANSHTCRTCSSSKTRPGCHTNACGLLTTNPVTQQSAQGELAEDVLKIPSTQGSSPGPMVTYPHFLFACAPSNILQKGLPKNVQGVAGLGHSPISLPYQLASHFGFPPKFAVCLTSSPGKNGAVFF
type: DOMAIN
name: TAXi_N
description: Xylanase inhibitor, N-terminal

phrase: HVVQIHKRTPLVQFPFVIDLTGRFLSVNCENQYTSSTYKAPVCHSSQCARANSHTCRTCSSSKTRPGCHTNACGLLTTNPVTQQSAQGELAEDVLKIPSTQGSSPGPMVTYPHFLFACAPSNILQKGLPKNVQGVAGLGHSPISLPYQLASHFGFPPKFAVCLTSSPGKNGAVFFGEGPYFMKPGIDVSRQLTYAPFTIGQQGEYYINVQSFKINNAMLPSIPKGGFGGAMISTTTPYTTLQTPIFRALNQLFMNQLRGVPHVKPVAPFGACFDANRIPTSKMGPTVPSIDLVLDNKKNIMWRIFGANAMIQPRPGVMCLAFVDGGMRPKAPIVIGTQQLEDNLLQFDLMNSRLGF
type: DOMAIN
name: PEPTIDASE_A1
description: Peptidase family A1 domain

phrase: HKRTPLVQFPFVIDLTGRFLSVNCENQYTSSTYKAPVCHSSQCARANSHTCRTCSSSKTRPGCHTNACGLLTTNPVTQQSAQGELAEDVLKIPSTQGSSPGPMVTYPHFLFACAPSNILQKGLPKNVQGVAGLGHSPISLPYQLASHFGFPPKFAVCLTSSPGKNGAVFFGEGPYFMKPGIDVSRQLTYAPFTIGQQGEYYINVQSFKINNAMLPSIPKGGFGGAMISTTTPYTTLQTPIFRALNQLFMNQLRGVPHVKPVAPFGACFDANRIPTSKMGPTVPSIDLVLDNKKNIMWRIFGANAMIQPRPGVMCLAFVDGGMRPKAPIVIGTQQLEDNLLQFDLMNSRLGFSSS
type: DOMAIN
name: Xylanase_inhibitor_I-like
description: Xylanase inhibitor I-like

phrase: EYYINVQSFKINNAMLPSIPKGGFGGAMISTTTPYTTLQTPIFRALNQLFMNQLRGVPHVKPVAPFGACFDANRIPTSKMGPTVPSIDLVLDNKKNIMWRIFGANAMIQPRPGVMCLAFVDGGMRPKAPIVIGTQQLEDNLLQFDLMNSRLGF
type: DOMAIN
name: TAXi_C
description: Xylanase inhibitor, C-terminal
Protein sequence:
MYYPHMVQAGVAPFPGAPAGYAAAPNPGAAVVAAAAAAQQQQQQQQQQQQQQQQAQQQQQQQVAGGPPSAADSLSMAVAAAAAKQSADPVTQMKSGSEAAGSGNSNNNNTAGAGTGAPGAAGGLTTEYSSGGCGGGGASTANSVVVATSVSDVVNASLYMQQKSTVLIANEAAESQQSSAMQNAGGGGNTGGGGGGGGGGTPSSPLSNSPSSATASQAGGCGLTLNGSATEGSMSGDTSPVASGEPLLQTPPAHQQQQQQQQPLLCSSPTSMQSSGTSVTGSSIASGTLAATSSSGVGLLPTTGLDSIANGGAPTGCAVVPASTSQVIAHLNAAAAAASGIVSPSANVATSLSSALVPAQSVAAVAAASLDAKSQPKRLHVSNIPFRFRDPDLRAMFGQFGTILDVEIIFNERGSKGFGFVTFANSNDAERARERLHGTVVEGRKIEVNNATARVQTKKVTAVPNVCVQWPEAAVAAAMRGVAIQRGHVGVVGATPYHHPHHPHHHPALLAASAAAAQQQQQRQLAAAAVATAAVAQQQQQQQQAVVQQQQQQVAAAAQQQHQQQQQQQQQAVQQQQAVQQQQQHQQQQQQQQQQQHAAVAAAAAAASHPHMHAAHAHAHAHALGPQLAQLQAVAVPTAASNAAALQQSLAAAIQNPSGNPNAAAAAAAYAARLSAATGATQSPQTAAAAAAAASMAASANAANNAAALHGFAPVYYDPFLAAAASADPNLRFQAAKPVTEVPAAQPAAILNRRTVTTLNSNPHTINR

Annotated regions:
phrase: KRLHVSNIPFRFRDPDLRAMFGQFGTILDVEIIFNERGSKGFGFVTFANSNDAERARERLHGTVVEGRKIEVNNAT
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: HVSNIPFRFRDPDLRAMFGQFGTILDVEIIFNERGSKGFGFVTFANSNDAERARERLHGTVVEGRK
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: KRLHVSNIPFRFRDPDLRAMFGQFGTILDVEIIFNERGSKGFGFVTFANSNDAERARERLHGTVVEGRKIEVNNA
type: DOMAIN
name: FOX1_RRM
description: FOX1, RNA recognition motif

phrase: RLHVSNIPFRFRDPDLRAMFGQFGTILDVEIIFNERGSKGFGFVTFANSNDAERARERLHGTVVEGRKIEV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain
Protein sequence:
MEARALEHERRLAESHGQEALKHAIAAAEIYMRAAEKAANPKDRNRLQRKCSDLIALGERLKANAKSAATSARSPVPESTRTLTIAEKTLLLKSSKLHGNIFPPWEKTPASDEFAASKAADGCFTDHSPFTLSPEQQDIFAGWKRPHEIFMDVPERGVDVFMTATESIDLGQDLATDCSVVASLCAAVRQFGPRTGSLLSSLMYPYDDDVKRPAVSQNGKYIFRMYFNGCWRKVLIDDRLPTSSSERTLYVVDRRNPYLIWPALIEKAYLKIRGGYDFPGSNSGTDLHALTGWIPEQIFLQTDDIELNETWSRIKTAYEQGNALVTLGTGKFSREEERTLGLVREHDYAVLDLRNDGNNRLFLVKNPWRDSLVWTGVGSTATSSTDRSGSPEESMSNTFWMTFEDVLQHFDSLYVNWSPSLFRFRQDHHFTWTIPPKAEELVFTQNPQYSILSHTGSPVWILLNRHWQDSELDILRERKQEHDFHQPLKSLGYMSLSLFASHPPGTRIPLSEGSHHALHQGPFVDSPNTLLRYSPTPGVAQTLVIAQSDLPLPSYSFTLSFFSNSPLTISPASDPLPYNETITGAWTRRTAGGSTVYPSYVTNPQYALTLTRPSPLSLVLSTERADNLPVHIAVLYSNGGQRVTAVVGRDLICSSAEYQRGCTFASTLPSSNTSNVTSSVASNNHGHTSSSLIDPGTYTIVLSTYEPGQTGRYSLRVSAACPFTIEPILSDAAGRLRTPAPSPATFRQGEGRVRARVDVARLTRASVLARSVKTGSTTQKTAMVRVALELGTIEGRKRVLASTASGGGGELAASLSNLSLSERLGGIGGIGGGHIHGGQGTTEGDGYSAKGEFADASLGLRTREVDLDPDVIRVYGGLWLVVEQIGGGGQGHVTEGSDDDGGGGGGGGGGVHVEISSDGVVSIGEWEVADED

Annotated regions:
phrase: IFAGWKRPHEIFMDVPERGVDVFMTATESIDLGQDLATDCSVVASLCAAVRQFGPRTGSLLSSLMYPYDDDVKRPAVSQNGKYIFRMYFNGCWRKVLIDDRLPTSSSERTLYVVDRRNPYLIWPALIEKAYLKIRGGYDFPGSNSGTDLHALTGWIPEQIFLQTDDIELNETWSRIKTAYEQGNALVTLGTGKFSREEERTLGLVREHDYAVLDLRNDGNNRLFLVKNPWRDSLVWTGVGSTATSSTDRSGSPEESMSNTFWMTFEDVLQHFDSLY
type: DOMAIN
name: Peptidase_C2_calpain_cat
description: Peptidase C2, calpain, catalytic domain

phrase: FPPWEKTPASDEFAASKAADGCFTDHSPFTLSPEQQDIFAGWKRPHEIFMDVPERGVDVFMTATESIDLGQDLATDCSVVASLCAAVRQFGPRTGSLLSSLMYPYDDDVKRPAVSQNGKYIFRMYFNGCWRKVLIDDRLPTSSSERTLYVVDRRNPYLIWPALIEKAYLKIRGGYDFPGSNSGTDLHALTGWIPEQIFLQTDDIELNETWSRIKTAYEQGNALVTLGTGKFSREEERTLGLVREHDYAVLDLRNDGNNRLFLVKNPWRDSLVWTGVGSTATSSTDRSGSPEESMSNTFWMTFEDVLQHFDSLYVNWS
type: DOMAIN
name: Peptidase_C2_calpain_cat
description: Peptidase C2, calpain, catalytic domain

phrase: TGAWTRRTAGGSTVYPSYVTNPQYALTLTRPSPLSLVLSTERADNLPVHIAVLYSNGGQRVTAVVGRDLICSSAEYQRGCTFASTLPSSNTSNVTSSVASNNHGHTSSSLIDPGTYTIVLSTYEPGQTGRYSLR
type: DOMAIN
name: Calpain_domain_III
description: Peptidase C2, calpain, large subunit, domain III

phrase: ETITGAWTRRTAGGSTVYPSYVTNPQYALTLTRPSPLSLVLSTERADNLPVHIAVLYSNGGQRVTAVVGRDLICSSAEYQRGCTFASTLPSSNTSNVTSSVASNNHGHTSSSLIDPGTYTIVLSTYEPGQTGRYSLRVSAACPFTI
type: DOMAIN
name: Calpain_III
description: Peptidase C2, calpain, domain III

phrase: EKTLLLKSSKLHGNIFPPWEKTPASDEFAASKAADGCFTDHSPFTLSPEQQDIFAGWKRPHEIFMDVPERGVDVFMTATESIDLGQDLATDCSVVASLCAAVRQFGPRTGSLLSSLMYPYDDDVKRPAVSQNGKYIFRMYFNGCWRKVLIDDRLPTSSSERTLYVVDRRNPYLIWPALIEKAYLKIRGGYDFPGSNSGTDLHALTGWIPEQIFLQTDDIELNETWSRIKTAYEQGNALVTLGTGKFSREEERTLGLVREHDYAVLDLRNDGNNRLFLVKNPWRDSLVWTGVGSTATSSTDRSGSPEESMSNTFWMTFEDVLQHFDSLYVN
type: DOMAIN
name: Peptidase_C2_calpain_cat
description: Peptidase C2, calpain, catalytic domain

phrase: NIFPPWEKTPASDEFAASKAADGCFTDHSPFTLSPEQQDIFAGWKRPHEIFMDVPERGVDVFMTATESIDLGQDLATDCSVVASLCAAVRQFGPRTGSLLSSLMYPYDDDVKRPAVSQNGKYIFRMYFNGCWRKVLIDDRLPTSSSERTLYVVDRRNPYLIWPALIEKAYLKIRGGYDFPGSNSGTDLHALTGWIPEQIFLQTDDIELNETWSRIKTAYEQGNALVTLGTGKFSREEERTLGLVREHDYAVLDLRNDGNNRLFLVKNPWRDSLVWTGVGSTATSSTDRSGSPEESMSNTFWMTFEDVLQHFDSLYVNWSPSLFRFR
type: DOMAIN
name: Peptidase_C2_calpain_cat
description: Peptidase C2, calpain, catalytic domain
Protein sequence:
MKSVLGFKKAKVTQEKISMVTCYDYTLAKIINSTDIDCILVGDSGGMVLLGKKNTTYTTLDDMQFMTQAVANGATDKFIVADLPFMSYRQSLETTMQAVMALIQSGAHAIKLEGSSGNLDIIKHIVDSGVPIMGHIGMTPQFINSFGGFKVQGRTEEAAKHLLEEAKLLEQAGCFGIVLECIPANIAKDITQNLDIPTIGIGAGSNTDGQILVLQDMLGMNTDFQPKFVKKYIDGSKLFSDAINTYVKETKANTFPTKEHCYDYC

Annotated regions:
Protein sequence:
MSLKSLLKGFKRPKKIEFNTEANTPNYGKFVAEPFERGFATTIGNSLRRTLMSSIEGAAISAIRIEGVNHEFSFIEGVAEDVTRIILNLKQVRIKYEPEEKDQSKIIHLELKGAGYFRAGDLAVDSSIEIMNPDLHIATLNEDANLVMDLEIQRGRGYVPAEEKKKDIEVLGTIPVDSIFSPVQKVVFEVSETRVAQRSDYEKLTLEVWTDGSVSPDDAVAQAAKILKEHLTVFINFEEELEEEDDELDEADEKLKASLSKHVEELELSVRSLNVLRSLEIDFIGDLVKRSEEEMSKSKHYSDQCLQELKVKLSTLGLSFGMRDF

Annotated regions:
phrase: ADEKLKASLSKHVEELELSVRSLNVLRSLEIDFIGDLVKRSEEEMSKSKHYSDQCLQELKVKL
type: DOMAIN
name: RNAP_asu_C
description: RNA polymerase, alpha subunit, C-terminal

phrase: YGKFVAEPFERGFATTIGNSLRRTLMSSIEGAAISAIRIEGVNHEFSFIEGVAEDVTRIILNLKQVRIKYEPEEKDQSKIIHLELKGAGYFRAGDLAVDSSIEIMNPDLHIATLNEDANLVMDLEIQRGRGYVPAEEKKKDIEVLGTIPVDSIFSPVQKVVFEVSETRVAQRSDYEKLTLEVWTDGSVSPDDAVAQAAKILKEHLTVFIN
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: EPFERGFATTIGNSLRRTLMSSIEGAAISAIRIEGVNHEFSFIEGVAEDVTRIILNLKQVRIKYEPEEKDQSKIIHLELKGAGYFRAGDLAVDSSIEIMNPDLHIATLNEDANLVMDLEIQRGRGYVPAEEKKKDIEVLGTIPVDSIFSPVQKVVFEVSETRVAQRSDYEKLTLEVWTDGSVSPDDAVAQAAKILKEH
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: IRIEGVNHEFSFIEGVAEDVTRIILNLKQVRIKYEPEEKDQSKIIHLELKGAGYFRAGDLAVDSSIEIMNPDLHIATLNEDANLVMDLEIQRGRGYVPAEEKKKDIEVLGTIPVDSIF
type: DOMAIN
name: DNA-dir_RNA_pol_insert
description: DNA-directed RNA polymerase, insert domain
Protein sequence:
MIAGVDEAGRGAWIGNVVAAAVILPNDYDLPDLTDSKKLSAAKRERLCAAIYEQAIAVACAWCSPEEIDQLNIHYATLCAMKKAVITLKVAPTEVLIDGKFAPELPFPTRTIIGGDALEPAISAASIVAKVTRDKQMIALDALYPDYGFAAHKGYGTQKHQQALRQFGVLPLHRRSYAPIAALLKNNKK

Annotated regions:
phrase: MIAGVDEAGRGAWIGNVVAAAVILPNDYDLPDLTDSKKLSAAKRERLCAAIYEQAIAVACAWCSPEEIDQLNIHYATLCAMKKAVITLKVAPTEVLIDGKFAPELPFPTRTIIGGDALEPAISAASIVAKVTRDKQMIALDALYPDYGFAAHKGYGTQKHQQALRQFGVLPLHRRSYAPIAALLKNNK
type: DOMAIN
name: RNase_HII/HIII_dom
description: Ribonuclease HII/HIII domain

phrase: AGVDEAGRGAWIGNVVAAAVILPNDYDLPDLTDSKKLSAAKRERLCAAIYEQAIAVACAWCSPEEIDQLNIHYATLCAMKKAVITLKVAPTEVLIDGKFAPELPFPTRTIIGGDALEPAISAASIVAKVTRDKQMIALDALYPDYGFAAHKGYGTQKHQQALRQFGVLPLHRRSY
type: DOMAIN
name: RNase_HII/HIII_dom
description: Ribonuclease HII/HIII domain
Protein sequence:
MKVILIKDTKDGKANTIIDVSPGYATNFLFKNKLAEPLNSRTEKLLVKRKQQIEIEKQEKQEQIAKLKIEIERLVLWFKLKGNKESVHGAITAKKIKKELEIKGIFVDKQAIQTSGISTFGTSFVDIKLSSQTIAKLKINITKDE

Annotated regions:
phrase: GKANTIIDVSPGYATNFLFKNKLAEPL
type: DOMAIN
name: Ribosomal_bL9_N
description: Large ribosomal subunit protein bL9, N-terminal

phrase: MKVILIKDTKDGKANTIIDVSPGYATNFLFKNKLAEPLNSRTE
type: DOMAIN
name: Ribosomal_bL9_N
description: Large ribosomal subunit protein bL9, N-terminal

phrase: AKLKIEIERLVLWFKLKGNKESVHGAITAKKIKKELEIKGIFVDKQAIQTSGISTFGTSFVDIKLSSQTIAKLKINI
type: DOMAIN
name: Ribosomal_bL9_C
description: Large ribosomal subunit protein bL9, C-terminal
Protein sequence:
MIIDTPEVQDINSFSRLEYLKEVYGIIWMLVPIFTPVLGITIGVLAIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKENLLPSRGDTRLFSIGPSIAVISILLSYLIIPFGSNLVLSDLNIGVFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSSSTVDIVEAQSKYGFWGWNLWRQPIGFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWDLSIPYIFVPEFFEINKAGEVFGTTIGIFITLAKTYLFLFIPITTRWTLPRLRMDQLLNLGWKFLLPISLGNLLLTTSSQLLSL

Annotated regions:
phrase: GILQALADGTKLLFK
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_su1_CS
description: NADH:ubiquinone oxidoreductase, subunit 1, conserved site

phrase: PFDLPEAEEELVA
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_su1_CS
description: NADH:ubiquinone oxidoreductase, subunit 1, conserved site
Protein sequence:
MWITALLLAVLLLVILHRVYVGLYAASSPNPFAEDVKRPPEPLVTDKEARKKVLKQAFSVSRVPEKLDAVVIGSGIGGLASAAVLAKAGKRVLVLEQHTKAGGCCHTFGENGLEFDTGIHYIGRMREGNIGRFILDQITEGQLDWAPMASPFDLMILEGPNGRKEFPMYSGRKEYIQGLKKKFPKEEAVIDKYMELVKVVARGVSHAVLLKFLPLPLTQLLSKFGLLTRFSPFCRASTQSLAEVLQQLGASRELQAVLSYIFPTYGVTPSHTAFSLHALLVDHYIQGAYYPRGGSSEIAFHTIPLIQRAGGAVLTRATVQSVLLDSAGRACGVSVKKGQELVNIYCPVVISNAGMFNTYQHLLPETVRHLPDVKKQLAMVRPGLSMLSIFICLKGTKEDLKLQSTNYYVYFDTDMDKAMERYVSMPKEKAPEHIPLLFIAFPSSKDPTWEERFPDRSTMTALVPMAFEWFEEWQEEPKGKRGVDYETLKNAFVEASMSVIMKLFPQLEGKVESVTGGSPLTNQYYLAAPRGATYGADHDLARLHPHAMASIRAQTPIPNLYLTGQDIFTCGLMGALQGALLCSSAILKRNLYSDLQALGSKVKAQKKKM

Annotated regions:
Protein sequence:
MSNNSTAELRQEFLNFFHQKGHKIVASSSLVSHNDPTLLFTNAGMNQFKDVFLGLDKRLYQSATTAQRCIRAGGKHNDLEKVGYTARHHTFFEMLGNFSFGAYFKCEAIQLAWELLTGGQWFNLPKDKLWVTVYATDDETYNIWAKQINIPRERIVRIGDNKGKAYASDNFWQMGDIGPCGPCSEIFFDHGNHLFGAPPGSQGEYGDRYIEIWNLVFIQFNRQMDGTLIPLQKPSVDTGMGLERIAAVLQHVNSNYDIDIFSQLIKAVADVTKATNTSSLQVIADHIRSCAFLVSDGVVPSQDGRGYVLRHIIRRAIRHGYMLGARDAFFYKLVAPLIEVMGSTADQLKQQQNMVEQVLRTEEEQFSQTLERGLFMLEQVLTKLTGDTLDGETAFSLYDTYGLPIYLTTDICRERNIKVDENGFKSAMEVQRNRAREASRFSYKYNSMLSINQYTRFLGYKHLKSQGKVTALYLNDQSVEVIYHSEKAIVILDYTPFYGESGGQIGDSGKITAANGIFEVIDTKKYGNALGHLGMLNYGELRIGDQVTAKVNQLRRDRISVNHSATHLLQSALRQLLGKHVVQRGSLVHDQYLRFDFSHHQAMQVEQIHEVEKIINQQIRRNLIIKTDMMTLEAAQNQGAISVLDHQYESSQVRVLSIGDFSTELCCGTHASRTGDIGLFWISSESGIALGIRRIEAITGEFALKNLHQQSNLVQQISQLFKNDGSNLVEKVRGLQNHIKQLESKYQQLKSKQVAQEIAVLSRKISKMHGTQVLVSKLENIEPKIMRHIVDEIKHQLGSVVIILANINLVDGKVNLIAGVTDDLTNRIQASDIIRTLIQKFGGRGGGSKKIAYAGSITTNELSTVLYYIEKIVAVKFTESQEMN

Annotated regions:
phrase: VRVLSIGDFSTELCCGTHASRTGDIGLFWISSESGIALGIRRI
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD

phrase: GTQVLVSKLENIEPKIMRHIVDEIKHQLGSVVIILANINLVDGKVNLIAGVTDDLTNRIQASDIIRTLIQKFGGRGGGSKKIAYAGSITTNELSTVLYYIEK
type: DOMAIN
name: DHHA1_dom
description: DHHA1 domain

phrase: VRVLSIGDFSTELCCGTHASRTGDIGLFWISSESGIALGIRRI
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD

phrase: ELRQEFLNFFHQKGHKIVASSSLVSHNDPTLLFTNAGMNQFKDVFLGLDKRLYQSATTAQRCIRAGGKHNDLEKVGYTARHHTFFEMLGNFSFGAYFKCEAIQLAWELLTGGQWFNLPKDKLWVTVYATDDETYNIWAKQINIPRERIVRIGDNKGKAYASDNFWQMGDIGPCGPCSEIFFDHGNHLFGAPPGSQGEYGDRYIEIWNLVFIQFNRQMDGTLIPLQKPSVDTGMGLERIAAVLQHVNSNYDIDIFSQLIKAVADVTKATNTSSLQVIADHIRSCAFLVSDGVVPSQDGRGYVLRHIIRRAIRHGYMLGARDAFFYKLVAPLIEVMGSTADQLKQQQNMVEQVLRTEEEQFSQTLERGLFMLEQVLTKLTGDTLDGETAFSLYDTYGLPIYLTTDICRERNIKVDENGFKSAMEVQRNRAREASRFSYKYNSMLSINQYTRFLGYKHLKSQGKVTALYLNDQSVEVIYHSEKAIVILDYTPFYGESGGQIGDSGKITAANGIFEVIDTKKYGNALGHLGMLNYGELRIGDQVTAKVN
type: DOMAIN
name: Ala-tRNA-synth_IIc_N
description: Alanyl-tRNA synthetase, class IIc, N-terminal

phrase: NSTAELRQEFLNFFHQKGHKIVASSSLVSHNDPTLLFTNAGMNQFKDVFLGLDKRLYQSATTAQRCIRAGGKHNDLEKVGYTARHHTFFEMLGNFSFGAYFKCEAIQLAWELLTGGQWFNLPKDKLWVTVYATDDETYNIWAKQINIPRERIVRIGDNKGKAYASDNFWQMGDIGPCGPCSEIFFDHGNHLFGAPPGSQGEYGDRYIEIWNLVFIQFNRQMDGTLIPLQKPSVDTGMGLERIAAVLQHVNSNYDIDIFSQLIKAVADVTKATNTSSLQVIADHIRSCAFLVSDGVVPSQDGRGYVLRHIIRRAIRHGYMLGARDAFFYKLVAPLIEVMGSTADQLKQQQNMVEQVLRTEEEQFSQTLERGLFMLEQVLTKLTGDTLDGETAFSLYDTYGLPIYLTTDICRERNIKVDENGFKSAMEVQRNRAREASRFSYKYNSMLSINQYTRFLGYKHLKSQGKVTALYLNDQSVEVIYHSEKAIVILDYTPFYGESGGQIGDSGKITAANGIFEVIDTKKYGNALGHLGMLNYGELRIGDQVTAKVNQLRRDRISVNHSATHLLQSALRQLLGKHVVQRGSLVHDQYLRFDFSHHQAMQVEQIHEVEKIINQQIRRNLIIKTDMMTLEAAQNQGAISVLDHQYESSQVRVLSIGDFSTELCCGTHASRTGDIGLFWISSESGIALGIRRIEAITGEFALKNLH
type: DOMAIN
name: Ala-tRNA-synth_IIc_core
description: Alanyl-tRNA synthetase, class IIc, core domain
Protein sequence:
MSRENNCTTADLAWGIPSITQAWGLWALFGVVTMLLLISLAALLSQWTRGRRRTQEEQGPPSGRSVEEVPLYGNLHYLQTGRLSEESRSEEQDPSSGGLARGAEEATCYTSLQLRPAQGRIPSSGTPIKYCEVVLDSEPKPQASGPEPELYASVCAQTRRARASFPDQAYANSQPAPS

Annotated regions:
Protein sequence:
MKETIRIIGIDPGLRRTGWGIVESLGNSLHFIGSGTVTSNAEMDLASRLCQLHEGLSKVLHEYMPHEAAVEHTFVNKDATATLKLGQARGIALLAPAQAGLPVAEYAPNAVKKAVIGVGHGEKQQIHMMVKVLMPRASFDTSDAADALAIAICHAHHRQSIASARRLQQLIA

Annotated regions:
phrase: GVGHGEKQQIHMMVKVLMPRASFDTSDAADALAI
type: BINDING_SITE
name: X-over_junc_endoDNase_Mg_BS
description: Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site
Protein sequence:
MNSIVNITPIIIILSEHSSEHTFGFNSDIFEANVINILLLLFGLIYVLKQSLGSTLNERQLKVLAAIQESEERLEQASSRLSESEKQLAQTQIIINQIKKEAQLTAEKVRSSILAQGQIDIERLAITGKSNIETAEKQIRRQIQQQIAFLALKKVTLQLENQMSSDIQLRIIDNNIAKLGDQL

Annotated regions:
Protein sequence:
MLKLFSAFRKDKIWDFDGGIHPPEMKTQSNGTPLRQVPLAPRFVIPLKQHIGAEGELCVSVGDRVLRGQALTRGRGRMLPVHAPTSGTVIAIAPHSTAHPSALAELSVIIDADGEDRWIEREGWSDYRAHSREALIERIHQYGVAGLGGAGFPTGVKLQGGGDKITTLIINAAECEPYITADDRLMQDCAAQIVEGIRILAHILQPREVLIGIEDNKPQAISMLRAVLADAHDISLRVIPTKYPSGGAKQLTQILTGKQVPHGGRSSDIGVLMQNVGTAYAVKRAVVDGEPITERVVTLTGEAVSRPGNVWARLGTPVRHLLNDAGFCPSADQMVIMGGPLMGFTLPWLDVPVVKITNCLLAPSVTEMGAPQEEKSCIRCSACADACPADLLPQQLYWFSKGQQHDKATAHHIADCIECGACAWVCPSNIPLVQYFRQEKAEINAIRLEEKRAAEAKARFEARQARLEREKAVRLARHKSAAVQPAAKDQDAIAAALARVKEKQAQATQPVVIQAGSLPDNSAVIAAREARKAQARAKQAAHPVADSALPGDDPRKAAVEAAIARAKARKQEQQAGSEPAEPVDPRKAAVEAAIARAKARKQEQQAGSEPVEAVDPRKAAVEAAIARAKARKQEQQAGGEPAEAVDPRKAAVEAAIARAKARKQEQQAGSEPAEPAAPRKAAVEAAIARAKARKQEQQAGSEPAEAVDPRKAAVAAAIARVQAKKAAQQQVVNED

Annotated regions:
phrase: CIECGACAWVC
type: CONSERVED_SITE
name: 4Fe4S_Fe_S_CS
description: 4Fe-4S ferredoxin, iron-sulphur binding, conserved site

phrase: IHQYGVAGLGGAGFPTGVKLQGGGDKITTLIINAAECEPYITADDRLMQDCAAQIVEGIRILAHILQPREVLIGIEDNKPQAISMLRAVLADAHDISLRVIPTKYPSGGAKQLTQILTGKQVPHGGRSSDIGVLMQNVGTAYAV
type: DOMAIN
name: Nuo51_FMN-bd
description: NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain

phrase: VVTLTGEAVSRPGNVWARLGTPVRHLLNDAGFCPSADQMVIMGGPLMG
type: DOMAIN
name: Soluble_ligand-bd
description: Soluble ligand binding domain

phrase: WDFDGGIHPPEMKTQSNGTPLRQVPLAPRFVIPLKQHIGAEGELCVSVGDRVLRGQALTRGRGRMLPVHAPTSGTVIAIAPHSTAHPSALAELSVIIDADG
type: DOMAIN
name: RnfC_N
description: RnfC Barrel sandwich hybrid domain

phrase: KATAHHIADCIECGACAWVCPSNIPLVQY
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: MGAPQEEKSCIRCSACADACPADLLPQQL
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: SCIRCSACADACPADLLPQQLYWFSKGQQHDKATAHHIADCIECGACAWVCPSN
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain
Protein sequence:
MRVMGILRNCQQWWIWGILGFWMICNGMEDLWVTVYYGVPVWKEAKTTLFCASDAKAYEKEVHNVWATHACVPTNPNPQEIVIGNVTENFNMWKNDMVDQMHEDIISLWDQSLKPCVKLTPLCVTLDCVNVTINVTSTSNGTSTSNGNVTNYCFMHTCTFNATTEIRDKNFKKYALFYMLDIIPLDDDNNNSSNSSTYTSINCTTSTITSACPNVSFDPLPIHYCAPAGFAILKGNNKTFNGTGPCSSVGTMQCTHAIKPVISTQLLLNGILTEDDIIIKSENLTNNAKTIIVQLSRSIHIVCTRPNNNTRRRVLIGPGQAFYATRDILGNIRQAHCSITIRRWNETLLGVRKKLLEHFLTTSIGVNSSSRRDLYITTHIFYCNTSGLFNGTYMPTYMPNGTESNSNSTITIPCRIKQIINMWQEVGRAMYAPPIAGNITCISNITGLLLVRDGGHDGENNDTETFRPGGGNMKDNWRSELYKYKVVEVKPLGIAPTKAKRRVVEREKRAVGIGAVFLGFLGAAGSTMGAASMTLTVQARQLLSGIVQQQSNLLKAIEAQQHLLQLTVWGIKQLQTRVLAIERYLRDQQLLGIWGCSGKLICTTAVPWNFSWSNKSADEIWNNMTWMQWDREISNYTNTIYKLLEESQNQQEQNEKDLLALDSWKNLWSWFDISKWLWYIKIFIMIVGGLIGLRIIFAILSIVKRVRQGYSPLSFQTLTPNPRGPDRLGETEEEGGEQDRDRSIRLVSGFLPLAWDDLRSLCLFSYHR

Annotated regions:
phrase: VQARQLLSGIVQQQSNLLKAIEAQQHLLQLTVWGIKQLQTRVLAIERYLRDQQLLGIWGCSGKLICTTAVPWNFSWSNKSADEIWNNMTWMQWDREISNYTNTIYKLLEESQNQQEQNEKDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASMTLTVQARQLLSGIVQQQSNLLKAIEAQQHLLQLTVWGIKQLQTRVLAIERYLRDQQLLGIWGCSGKLICTTAVPWNFSWSNKSADEIWNNMTWMQWDREISNYTNTIYKLLEESQNQQEQNEKDLLALDSWKNLWSWFDISKWLWYIKIFIMIVGGLIGLRIIFAILSIVKRVRQGYSPLSFQT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKEAKTTLFCASDAKAYEKEVHNVWATHACVPTNPNPQEIVIGNVTENFNMWKNDMVDQMHEDIISLWDQSLKPCVKLTPLCVTLDCVNVTINVTSTSNGTSTSNGNVTNYCFMHTCTFNATTEIRDKNFKKYALFYMLDIIPLDDDNNNSSNSSTYTSINCTTSTITSACPNVSFDPLPIHYCAPAGFAILKGNNKTFNGTGPCSSVGTMQCTHAIKPVISTQLLLNGILTEDDIIIKSENLTNNAKTIIVQLSRSIHIVCTRPNNNTRRRVLIGPGQAFYATRDILGNIRQAHCSITIRRWNETLLGVRKKLLEHFLTTSIGVNSSSRRDLYITTHIFYCNTSGLFNGTYMPTYMPNGTESNSNSTITIPCRIKQIINMWQEVGRAMYAPPIAGNITCISNITGLLLVRDGGHDGENNDTETFRPGGGNMKDNWRSELYKYKVVEVKPLGIAPTKAKRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MSQKFTTAIVGATGAVGQKIIEKLVERSFPFAELKLLASKKSAGKQIEVNGKNYTIEEATPEAFEGVDIAFFSAGGSISKALAKEASKRGAIVVDNTSAFRMDPDVPLVVPEVNKQALHEQQGIIANPNCSTIQMVVALEPIRKQYGLSKVIVSTYQAVSGAGAAAIHELTSQSERIAEKQPTSEILPVKSEEKHFPIAGNVIPQIDVFNEDGFTFEEHKMMNETKKIMSLPDLSIAATCVRVPVVTGHSESVYIEVEKENVTVADIKQLLASAEGVTLQDDPSEQLYPMPYFSEDEDAVFIGRIRKDPSSEYGFHMWIVADNLLKGAALNSIQIAEALIDEKIL

Annotated regions:
phrase: IAATCVRVPVVTGH
type: CONSERVED_SITE
name: Asp-semialdehyde_DH_CS
description: Aspartate-semialdehyde dehydrogenase, conserved site

phrase: LEPIRKQYGLSKVIVSTYQAVSGAGAAAIHELTSQSERIAEKQPTSEILPVKSEEKHFPIAGNVIPQIDVFNEDGFTFEEHKMMNETKKIMSLPDLSIAATCVRVPVVTGHSESVYIEVEKENVTVADIKQLLASAEGVTLQDDPSEQLYPMPYFSEDEDAVFIGRIRKDPSSEYGFHMWIVADNLL
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: TTAIVGATGAVGQKIIEKLVERSFPFAELKLLASKKSAGKQIEVNGKNYTIEEATPEAFEGVDIAFFSAGGSISKALAKEASKRGAIVVDNTSAFRMDPDVPLVVPEVNKQALHE
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: TAIVGATGAVGQKIIEKLVERSFPFAELKLLASKKSAGKQIEVNGKNYTIEEATPEAFEGVDIAFFSAGGSISKALAKEASKRGAIVVDNTSAFRMDPDVPLVVPEVNKQALH
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding