nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSLTRLHIETFRNISLAQLDPGDGLNLIYGQNGSGKTSILEAIYFLGMGRSFRSHLSQRVIQHNDDKLTLFANLSVCEQESKIGLRRFRNGETEVKINGDNIKRLSTLAETLPIQVITPESFSLLFEGPKSRRQFIDWGAFHSDKSFHLAWANVRRILKQRNQLLKNQVSYSQIQYWDKELVRYSEQVTEIRKQYVDSLNEQLKGIIGEFLPLVEVKVSFTRGWDSKTDFGQLLETQYLRDVAAGNTGSGPHKADLRLRVGVLPVQDALSRGQLKLLVCALRIAQGKLLKQQTDKNSIYLVDDLPSELDAQHRKLLLQQLMDTGAQVFVTAIEPAAIVDSLATPPSKMFHVEQGCVTVIDKPTRE

Annotated regions:
phrase: ITPESFSLLFEGPKSRRQFI
type: CONSERVED_SITE
name: DNA-binding_RecF_CS
description: DNA-binding, RecF, conserved site

phrase: LTRLHIETFRNISLAQLDPGDGLNLIYGQNGSGKTSILEAIYFLGMGRSFRSHLSQRVIQHNDDKLTLFANLSVCEQESKIGLRRFRNGETEVKINGDNIKRLSTLAETLPIQVITPESFSLLFEGPKSRRQFIDWGAFHSDKSFHLAWANVRRILKQRNQLLKNQVSYSQIQYWDKELVRYSEQVTEIRKQYVDSLNEQLKGIIGEFLPLVEVKVSFTRGWDSKTDFGQLLETQYLRDVAAGNTGSGPHKADLRLRVGVLPVQDALSRGQLKLLVCALRIAQGKLLKQQTDKNSIYLVDDLPSELDAQHRKLLLQQLMDTGAQVFVTAIEPAAIVDSLATPPSKMFHVEQG
type: DOMAIN
name: RecF/RecN/SMC_N
description: RecF/RecN/SMC, N-terminal

phrase: IYLVDDLPSELDAQHRKL
type: CONSERVED_SITE
name: DNA-binding_RecF_CS
description: DNA-binding, RecF, conserved site
Protein sequence:
MRILLIHSDYLKYETKNKTGIAEEIPEDKMQGDFRESLVVFTAVEAEDEDNPESVIENAVNEIIKVFNDVKAENVVIYPYAHLSSSLSSPKTAVEVLEGMESALRSEGVDVSRVPFGWYKAFKISCKGHPLSELSRSIRPQPPKVEEESEESEWFILHRGETVKPGDFEFKNRDLENLVKYELGELESSGEEPPHVRLMREKGLADYEPSADVGHLRWYPRGRLIRDLLADYVYMLVTSEGAMPVETPIMYDLEDEAIRVHAEKFGERQYRMKNRKELMLRYACCFGAFRILSDSFLTWKNLPASIYELSTYSFRLEKKGEVVGLKRLRGFTMPDLHTVCADLDQSLEEFARQVEMCMRTGQDLQVNYEVIFRATADFYEEYREWVHEVADKIGKPVLLEILPSRKHYWIAKMDFAAIDYLGRPIENPTVQIDVESGERFGITYVNSDEEEVNPIILHCSPTGSIERVICSLLEKTAIEMDEKPPMLPLWLSPTQVRVLPIAERHMEYASDLVSELIAADVRADLDDRSETLGKKIRNAAQDWVPYVVVIGDSEMEGKLTVNVRETGEKLQMGLDELIERIRAETEGMPFRRLPLPVKLSERINF

Annotated regions:
phrase: PTQVRVLPIAERHMEYASDLVSELIAADVRADLDDRSETLGKKIRNAAQDWVPYVVVIGDSEMEGKLTVNVRETGEKLQMGLDELIERI
type: DOMAIN
name: ThrRS_anticodon
description: Threonine-tRNA ligase, class IIa, anticodon-binding domain

phrase: MKNRKELMLRYACCFGAFRILSDSFLTWKNLPASIYELSTYSFRLEKKGEVVGLKRLRGFTMPDLHTVCADLDQSLEEFARQVEMCMRTGQDLQVNYEVIFRATADFYEEYREWVHEVADKIGKPVLLEILPSRKHYWIAKMDFAAIDYLGRPIENPTVQIDVESGERFGITYVNSDEEEVNPIILHCSPTGSIERVICSLLE
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: QVRVLPIAERHMEYASDLVSELIAADVRADLDDRSETLGKKIRNAAQDWVPYVVVIGDSEMEGKLTVNVRETGEKLQMGLDELIERIR
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: MRILLIHSDYLKYETKNKTGIAEEIPEDKMQGDFRESLVVFTAVEAEDEDNPESVIENAVNEIIKVFNDVKAENVVIYPYAHLSSSLSSPKTAVEVLEGMESALRSEGVDVSRVPFGWYKAFKISCKGHPLSELSRS
type: DOMAIN
name: Threonyl-tRNA_syn_edit_dom_arc
description: Threonyl-tRNA synthetase, editing domain, archaea

phrase: PHVRLMREKGLADYEPSADVGHLRWYPRGRLIRDLLADYVYMLVTSEGAMPVETPIMYDLEDEAIRVHAEKFGERQYRMKNRKELMLRYACCFGAFRILSDSFLTWKNLPASIYELSTYSFRLEKKGEVVGLKRLRGFTMPDLHTVCADLDQSLEEFARQVEMCMRTGQDLQVNYEVIFRATADFYEEYREWVHEVADKIGKPVLLEILPSRKHYWIAKMDFAAIDYLGRPIENPTVQIDVESGERFGITYVNSDEEEVNPIILHCSPTGSIERVICSLLEKTAIEMDEKPPML
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II
Protein sequence:
MPTVVLGVTGCIGAYKACEVLRDLQRRDVDVHVVMTKHATEFVSAMTFEALSRHPVFLDQFALGAEGDIRHISLADAAQVLLVAPATANLLGKFARGIADDALTTLYLATKAKVVVAPAMNVNMFDHPAVRENLDILRARGVRIVEPGSGYLACGWLGRGRLAEPADIVSAAMDALGLTASGDLAGETVLVTAGPTVEDLDPVRFLSNRSTGRMGFALAETARDRGARVVLVAGPTSIEPPAGVDVVQVRSAEEMARAVGDRVGPATIVAMAAAVSDYRPAERAPSKLKKTPGEGTLVLTRTPDILATLGKSKGRRFVIGFAAETDRVLENARAKRAAKNADLLVANDVSRADSGFASEHNAAVLIDAEAETELPLMSKRALADRIWDRVLALRARPAPKALAKRAARPARRK

Annotated regions:
phrase: LAGETVLVTAGPTVEDLDPVRFLSNRSTGRMGFALAETARDRGARVVLVAGPTSIEPPAGVDVVQVRSAEEMARAVGDRVGPATIVAMAAAVSDYRPAERAPSKLKKTPGEGTLVLTRTPDILATLGKSKGRRFVIGFAAETDRVLENARAKRAAKNADLLVANDVSRADSGFASEHNAAVL
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal

phrase: TVVLGVTGCIGAYKACEVLRDLQRRDVDVHVVMTKHATEFVSAMTFEALSRHPVFLDQFALGAEGDIRHISLADAAQVLLVAPATANLLGKFARGIADDALTTLYLATKAKVVVAPAMNVNMFDHPAVRENLDILRARGVRIVEPGSGYLACGWLGRGRLAEPADIVSAAMD
type: DOMAIN
name: Flavoprotein
description: Flavoprotein
Protein sequence:
MIARLTGMLAHKSPDAIIIDVNGVGYRVQIPFSTYYELPDEGKTVSLSIYTHVKEDAISLFGFRTVAEKEFFQVLISVSGIGPKMARDILSNIQPDELAGAILQGNLVRLSSIPGIGKKTAERLVLELKEKVRKMDVAPSTKEAAPSEAPPEVADDVASALVNLGYKEAVVRKVLAEMAIESGASTEAVLRQALKILMK

Annotated regions:
phrase: VADDVASALVNLGYKEAVVRKVLAEMAIESGASTEAVLRQALKIL
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal

phrase: VADDVASALVNLGYKEAVVRKVLAEMAIESGASTEAVLRQAL
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal

phrase: MIARLTGMLAHKSPDAIIIDVNGVGYRVQIPFSTYYELPDEGKTVSLSIYTHVKEDAISLF
type: DOMAIN
name: DNA_helicase_Holl-junc_RuvA_I
description: DNA helicase, Holliday junction RuvA type, domain I, bacterial

phrase: QVLISVSGIGPKMARDILS
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: VRLSSIPGIGKKTAERLVL
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1
Protein sequence:
MAGPTAPTTAPTAIRAGGPLLSPVRRNIIFTALVFGVLVAATGQTIVVPALPTIVAELGSTVDQSWAVTSYLLGGTVVVVVAGKLGDLLGRNRVLLGSVVVFVVGSVLCGLSQTMTMLAISRALQGVGAGAISVTAYALAAEVVPLRDRGRYQGVLGAVFGVNTVTGPLLGGWLTDYLSWRWAFWINVPVSIAVLTVAATAVPALARPPKPVIDYLGILVIAVATTALIMATSWGGTTYAWGSATIVGLLIGAAVALGFFVWLEGRAAAAILPPRLFGSPVFAVCCVLSFVVGFAMLGALTFVPIYLGYVDGASATASGLRTLPMVIGLLIASTGTGVLVGRTGRYKIFPVAGMALMAVAFLLMSQMDEWTPPLLQSLYLVVLGAGIGLSMQVLVLIVQNTSSFEDLGVATSGVTFFRVVGASFGTATFGALFVNFLDRRLGSALTSGAVPVPAVPSPAVLHQLPQSMAAPIVRAYAESLTQVFLCAVSVTVVGFILALLLREVPLTDIHDDADDLGDGFGVPRAESPEDVLEIAVRRMLPNGVRLRDIATQPGCGLGVAELWALLRIYQYQRLFEAVRLTDIGRHLHVPYQVFEPVFDRLVQTGYAARDGDILTLTPSGHRQVDSLAVLIRQWLLDHLAVAPGLKRQPDHQFEAALQHVTDAVLVQRDWYEDLGDLSESRQLAATT

Annotated regions:
phrase: LQGVGAGAISVTAYALAAEVVPLRD
type: CONSERVED_SITE
name: Sugar_transporter_CS
description: Sugar transporter, conserved site

phrase: IFTALVFGVLVAATGQTIVVPALPTIVAELGSTVDQSWAVTSYLLGGTVVVVVAGKLGDLLGRNRVLLGSVVVFVVGSVLCGLSQTMTMLAISRALQGVGAGAISVTAYALAAEVVPLRDRGRYQGVLGAVFGVNTVTGPLLGGWLTDYLSWRWAFWINVPVSIAVLTVAATAVPALARPPKPVIDYLGILVIAVATTALIMATSWGGTTYAWGSATIVGLLIGAAVALGFFVWLEGRAAAAILPPRLFGSPVFAVCCVLSFVVGFAMLGALTFVPIYLGYVDGASATASGLRTLPMVIGLLIASTGTGVLVGRTGRYKIFPVAGMALMAVAFLLMSQMDEWTPPLLQSLYLVVLGAGIGLSMQVLVLIVQNTSSFEDLGVATSGVTFFRVVGASFGTATFGALFVNFLDRRLGSALTSGAVPVPAVPSPAVLHQLPQSMAAPIVRAYAESLTQVFLCAVSVTVVGFILALLLREVP
type: DOMAIN
name: MFS_dom
description: Major facilitator superfamily domain
Protein sequence:
MPHHYILTLFGLLPVATNISTWWNFGSMLLACLALQVLTGFFLAVHYTANINLAFSSIIHITRDVPYGWMMQNLHAIGASMFFICIYIHIARGLYYGSYLNKETWMSGITLLITLMATAFFGYVLPWGQMSFWAATVITNLLTAVPYLGTTLTTWLWGGFAINDPTLTRFFALHFILPFAIISMSSLHIILLHEEGSSNPLGTNPDIDKIPFHPYHSYKDLLFLTLMILFMLIIVSFFPDIFNDPDNFSKANPLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALVMSIMILFIIPFTHTAHFRPMTFRPLSQLMFWTLVSTFITITWAATKPVEPPYIIISQVTATLYFIFFISMPLLGWIENKMTNTP

Annotated regions:
phrase: GTNPDIDKIPFHPYHSYKDLLFLTLMILFMLIIVSFFPDIFNDPDNFSKANPLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALVMSIMILFIIPFTHTAHFRPMTFRPLSQLMFWTLVSTFITITWAATKPVEPPYIIISQVTATLYFIFFISMPLLGWIENKMTNT
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: MPHHYILTLFGLLPVATNISTWWNFGSMLLACLALQVLTGFFLAVHYTANINLAFSSIIHITRDVPYGWMMQNLHAIGASMFFICIYIHIARGLYYGSYLNKETWMSGITLLITLMATAFFGYVLPWGQMSFWAATVITNLLTAVPYLGTTLTTWLWGGFAINDPTLTRFFALHFILPFAIISMSSLHIILLHEEGSSNP
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: LPVATNISTWWNFGSMLLACLALQVLTGFFLAVHYTANINLAFSSIIHITRDVPYGWMMQNLHAIGASMFFICIYIHIARGLYYGSYLNKETWMSGITLLITLMATAFFGYVLPWGQMSFWAATVITNLLTAVPYLGTTLTTWLWGGFAINDPTLTRFFALHFILPFAIISMSSLHIILLHEEGS
type: DOMAIN
name: Cytochrome_b_N_euk/bac
description: Cytochrome b/b6, N-terminal domain, eukaryotic/bacterial

phrase: KANPLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALVMSIMILFIIPFTHTAHFRPMTFRPLSQLMFWTLVSTFITITWAATKPVEPPYIIISQVTATLY
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: LPVATNISTWWNFGSMLLACLALQVLTGFFLAVHYTANINLAFSSIIHITRDVPYGWMMQNLHAIGASMFFICIYIHIARGLYYGSYLNKETWMSGITLLITLMATAFFGYVLPWGQMSFWAATVITNLLTAVPYLGTTLTTWLWGGFAINDPTLTRFFALHFILPFAIISMSSLHIILLHEE
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: NPLGTNPDIDKIPFHPYHSYKDLLFLTLMILFMLIIVSFFPDIFNDPDNFSKANPLVTPQHIKPEWYFLFAYGILRSIPNKLGGALALVMSIMILFIIPFTHTAHFRPMTFRPLSQLMFWTLVSTFITITWAATKPVEPPYIIISQ
type: DOMAIN
name: Cytochrome_b_C_euk/bac
description: Cytochrome b/b6, C-terminal domain, eukaryotic/bacterial
Protein sequence:
MENGKMNSLIAQYPLVKDLVALKETTWFNPGTTSLAEGLPYVGLTEQDVQDAHARLSRFAPYLAKAFPETAATGGIIESELVAIPAMQKRLEKEYQQPISGQLLLKKDSHLPISGSIKARGGIYEVLAHAEKLALEAGLLTLDADYSKLLSPEFKQFFSQYSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQDYGVAVEEGRKAAQSDPNCFFIDDENSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHSPCMLLGVHTGLHDQISVQDIGIDNLTAADGLAVGRASGFVGRAMERLLDGFYTLSDQTMYDMLGWLAQEEGIRLEPSALAGMAGPQRVCASVSYQQMHGFNAEQLHNATHLVWATGGGMVPEEEMNQYLAKGR

Annotated regions:
phrase: RLEKEYQQPISGQLLLKKDSHLPISGSIKARGGIYEVLAHAEKLALEAGLLTLDADYSKLLSPEFKQFFSQYSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADARAWKKAKLRSHGVTVVEYEQDYGVAVEEGRKAAQSDPNCFFIDDENSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHSPCMLLGVHTGLHDQISVQDIGIDNLTAADGLAVGRASGFVGRAMERLLDGFYTLSDQTMYDMLGWLAQEEGIRLEPSALAGMAGPQRV
type: DOMAIN
name: TrpB-like_PALP
description: Tryptophan synthase beta chain-like, PALP domain

phrase: DSHLPISGSIKARG
type: BINDING_SITE
name: Ser/Thr_deHydtase_PyrdxlP-BS
description: Serine/threonine dehydratase, pyridoxal-phosphate-binding site
Protein sequence:
MATLTNLEPLATGTVILKTTRGDIQIELWCKEVPKACRNFIQLCLEGYYDGTIVHRVVPEFLIQGGDPTGTGMGGESIYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVVGDTIYNVVRISELELDANQRPVFPPKIISTEVIDNYFTDIKPRSTKEEREKIANELAHQEKQKERNKLLKSGRRNKAVLSFGDEVDMPIVKKPLRQKTPVSRSSDTTTELSKDLISSSSSIHSTYSSAQTGLTSAKVSSDEYARQVDTLDTKLNSSSKSKVQEEISRLKSELRDLEKSGGSSNSKPVVVRPKKRNILTEELEKYKKSKKVVLGKRKNLENDEESTLRALSSFQSKIRNAEDEDVMDSQYGSKIEDTPCSLHNVPGCFSCFDRLGEKNITETNSNWFAHRLVAENDPTRRTEELRIQRAEELKDVPSARPKKLLMKRDII

Annotated regions:
phrase: VILKTTRGDIQIELWCKEVPKACRNFIQLCLEGYYDGTIVHRVVPEFLIQGGDPTGTGMGGESIYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVVGDTIYNVVRISELELDANQRPVFPPKIISTE
type: DOMAIN
name: Cyclophilin-type_PPIase_dom
description: Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain

phrase: YDGTIVHRVVPEFLIQG
type: CONSERVED_SITE
name: Cyclophilin-type_PPIase_CS
description: Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site

phrase: LWCKEVPKACRNFIQ
type: DOMAIN
name: Cyclophilin-type_PPIase_dom
description: Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain

phrase: VHRVVPEFLIQG
type: DOMAIN
name: Cyclophilin-type_PPIase_dom
description: Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain

phrase: GLVGMACTENEGNNS
type: DOMAIN
name: Cyclophilin-type_PPIase_dom
description: Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain

phrase: QFFITLGPTPEW
type: DOMAIN
name: Cyclophilin-type_PPIase_dom
description: Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain

phrase: GKQTLFGRVVGDTIY
type: DOMAIN
name: Cyclophilin-type_PPIase_dom
description: Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain

phrase: GDIQIELWCKEVPKACRNFIQLCLEGYYDGTIVHRVVPEFLIQGGDPTGTGMGGESIYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITLGPTPEWNGKQTLFGRVVGDTIYNVVRISELELDANQRPVFPPKIISTE
type: DOMAIN
name: Cyclophilin-type_PPIase_dom
description: Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain
Protein sequence:
MSALLNITEPNNNTNTKNDHFLASLTTDATQSTASKYSREQIAQLFDLPLMDLLLQAQTIHRQNFTANEVQISTLLSIKTGNCPEDCGYCSQSGHHRDKTELVAEKRIEVSKVIAAAKRAKATGSSRFCMGAAWKHPSAKDMPYVVELVKEVKALGLETCMTLGMLDTDQAAQLANAGLDYYNHNLDTSRSYYEQVVSTRSYDERLDTIANVRNSGINVCSGNIVGMGESRDDRIDWVHELLKMPKAPESIPVNLLVPIQGTPIGDKVLAEGQLSVLEWIRTIAVTRICCPSSYVRLSAGRESLSDAEQALAFMAGANSFFYGDKLLTTGNASQSGDDRLMRELGLTKQFSAPRLPKQVPVLDAMSGHQSQVILASLS

Annotated regions:
phrase: NEVQISTLLSIKTGNCPEDCGYCSQSGHHRDKTELVAEKRIEVSKVIAAAKRAKATGSSRFCMGAAWKHPSAKDMPYVVELVKEVKALGLETCMTLGMLDTDQAAQLANAGLDYYNHNLDTSRSYYEQVVSTRSYDERLDTIANVRNSGINVCSGNIVGMGESRDDRIDWVHELLKMPKAPESIPVNLLVPIQGTPIGDKVLAEGQLSVLEWIRTIAVTRICCP
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: KTGNCPEDCGYCSQSGHHRDKTELVAEKRIEVSKVIAAAKRAKATGSSRFCMGAAWKHPSAKDMPYVVELVKEVKALGLETCMTLGMLDTDQAAQLANAGLDYYNHNLDTSRSYYEQVVSTRSYDERLDTIANVRNSGINVCSGNIVGMGESRDDRIDWV
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: PVNLLVPIQGTPIGDKVLAEGQLSVLEWIRTIAVTRICCPSSYVRLSAGRESLSDAEQALAFMAGANSFFYGDKLLTTGNASQSGDDRLMRELGLT
type: DOMAIN
name: BATS_dom
description: Biotin and thiamin synthesis-associated domain

phrase: PVNLLVPIQGTPIGDKVLAEGQLSVLEWIRTIAVTRICCPSSYVRLSAGRESLSDAEQALAFMAGANSFFYGDKLLTTGNASQSGDDRLMRELG
type: DOMAIN
name: BATS_dom
description: Biotin and thiamin synthesis-associated domain

phrase: STLLSIKTGNCPEDCGYCSQSGHHRDKTELVAEKRIEVSKVIAAAKRAKATGSSRFCMGAAWKHPSAKDMPYVVELVKEVKALGLETCMTLGMLDTDQAAQLANAGLDYYNHNLDTSRSYYEQVVSTRSYDERLDTIANVRNSGINVCSGNIVGMGESRDDRIDWVHELLKMPKAPESIPVNLLVPIQGTPIGDKVLAEGQLSVLEWIRTIAVTR
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain
Protein sequence:
MHTVQKDTTFTKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNPIIDGRKANVNLAYLGAKPRSIQTGFTIGVQQLHPAFIQRPFGLTPHYVYPQAIIQPSVVIPTPVQSIASPYIDYTAASQAYSQYTTAAYDQYPYAASPAAGFVGYGYTGAVQPPITASTPAAPATAFVQYQPQQLQPDRMQ

Annotated regions:
phrase: KIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNPIIDGRKANV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: IFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERAC
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: TKIFVGGLPYHTTDSSLRKYFEVFGDIEEAVVITDRQTGKSRGYGFVTMADRAAAERACKDPNPIIDGRKANVNLAY
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain
Protein sequence:
MTADLLPVRRALLSVSDKTGLVELATALAARGVELLSTGGTAKAIRDAGLAVKDVADVTGFPEMMDGRVKTLHPMVHGGLLGRSGLDDAVMAEHGIGAIDLLVLNLYPFESVTAKADCSLADAVENIDIGGPAMLRSAAKNFARVAVATDPSQYAELLASLEANNGQLTAATRFAFSVAAFNRVAQYDAAISNYLSAVTATDTAVPVRAEYPAQMNSTFVKVMDLRYGENPHQSGAFYRDLYPVPGTLATFQQLQGKELSYNNLADADAAWECVRQFDAPACVIVKHANPCGVAVGAGNGDAYELAYATDPTSAFGGIIAFNKPLDAATAKVILDRQFVEVLIAPDYEPAALEYAQKKANVRVLRIPHGDGLNNFDNKRVGSGLLLQSSDNRGMTRDELKVVSKLAPTDKQFTDLLFAWKVAKFVKSNAIVYAKDNRTIGVGAGQMSRVYSARIAGIKAADANLVVEGSVMASDAFFPFRDGIDAAAAAGIKAVIQPGGSMRDAEVIAAADEHGLAMVFTGVRHFRH

Annotated regions:
phrase: MTADLLPVRRALLSVSDKTGLVELATALAARGVELLSTGGTAKAIRDAGLAVKDVADVTGFPEMMDGRVKTLHPMVHGGLLGRSGLDDAVMAEHGIGAIDLLVLNLYPFESVTAKADCSLADAVENIDIGGPAMLRSAAKNFARVAVA
type: DOMAIN
name: MGS-like_dom
description: Methylglyoxal synthase-like domain

phrase: GLVELATALAARGVELLSTGGTAKAIRDAGLAVKDVADVTGFPEMMDGRVKTLHPMVHGGLLGRSGLDDAVMAEHGIGAIDLLVLNLYPFESVTAKADCSLADAVENIDIGG
type: DOMAIN
name: MGS-like_dom
description: Methylglyoxal synthase-like domain

phrase: GLVELATALAARGVELLSTGGTAKAIRDAGLAVKDVADVTGFPEMMDGRVKTLHPMVHGGLLGRSGLDDAVMAEHGIGAIDLLVLNLYPFESVTAKADCSLADAVENIDIGGP
type: DOMAIN
name: MGS-like_dom
description: Methylglyoxal synthase-like domain
Protein sequence:
MGFLCRRRSSAAPAESFSLLCEEDSESVFGSDDDGVEETATMAPELGKMMSLGFSASHHLGDGGGGGEELVGSFMEKEVEQMVETARGEYLTKLSNGGIELSCRIAAIDWICKVQAYYSFGPLCAYLAVNYLDRFLSSVEFSVTNDMPWMQQLLIVACLSLAAKMEETAAPGTLDLQVCNPEYVFDAETIHRMEIIVLTTLKWRMQAVTPFTYIGHFLDKINEGNRITSELISRCTEIILSTMKATVFLRFRPSEIATAVALSVVADGGRVLDFGGVLESSKLPVDKDNVGRCHQAMQEMALVMQNSTASPSDSLCYDMTNPVLDCHILRRRECVSLQSGPRDELEMGWAPFAITVSEKEESERRCDDGWRRGGEAAQYCEQADEQRRSTDGRAGVRLEEQAGGE

Annotated regions:
phrase: RGEYLTKLSNGGIELSCRIAAIDWICKVQAYYSFGPLCAYLAVNYLDRFLSSVEFSVTNDMPWMQQLLIVACLSLAAKMEETAAPGTLDLQVCNPEYVFDAETIHRMEIIVLTTLKWR
type: DOMAIN
name: Cyclin_N
description: Cyclin, N-terminal

phrase: VTPFTYIGHFLDKINEGNRITSELISRCTEIILSTMKATVFLRFRPSEIATAVALSVVADGGRVLDFGGVLESSKLPVDKDNVGRCHQAMQEM
type: DOMAIN
name: Cyclin_C-dom
description: Cyclin, C-terminal domain

phrase: RIAAIDWICKVQAYYSFGPLCAYLAVNYLDR
type: CONSERVED_SITE
name: Cyclins_cyclin-box
description: Cyclins, cyclin-box

phrase: VTPFTYIGHFLDKINEGNRITSELISRCTEIILSTMKATVFLRFRPSEIATAVALSVVADGGRVLDFGGVLESSKLPVDKDNVGRCHQAMQEMALVMQNSTASPSDSLCYDMTNPVLDCHILRRRECVSLQSG
type: DOMAIN
name: Cyclin_C-dom
description: Cyclin, C-terminal domain

phrase: DWICKVQAYYSFGPLCAYLAVNYLDRFLSSVEFSVTNDMPWMQQLLIVACLSLAAKMEETAAPGTLDLQVCNPEYVFDAETIHRMEIIVL
type: DOMAIN
name: Cyclin-like_dom
description: Cyclin-like domain
Protein sequence:
MAKENAEFKEYEKLLDQAYEQLPDKIFEAKRFKVPKGYSVIQGNRTIIKNFGDVSRTLNRDPQHVLKYLLRELGTSGNVEGNRAILQGKFTHYVINDRVKEYVDNFVMCHECNRPDTVIIREDRIDMLKCSACGARAPLKSL

Annotated regions:
phrase: EAKRFKVPKGYSVIQGNRTIIKNFGDVSRTLNRDPQHVLKYLLRELGTSGNVEGNRAILQGKFTHYVINDRVKEYVDNFVMCHECNRPDTVIIREDRIDMLKCSACGA
type: DOMAIN
name: Transl_init_fac_IF2/IF5_dom
description: Translation initiation factor IF2/IF5 domain

phrase: AKRFKVPKGYSVIQGNRTIIKNFGDVSRTLNRDPQHVLKYLLRELGTSGNVEGNRAILQGKFTHYVINDRVKEYVDNFVMCHECNRPDTVIIREDRIDMLKCSACGA
type: DOMAIN
name: Transl_init_fac_IF2/IF5_dom
description: Translation initiation factor IF2/IF5 domain
Protein sequence:
MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTMMRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVFDNGSIYSPEVLDITEQALHTRFLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPSAFAAAAPVAAATTAAPAAAAAPAKVEAKEESEESDEDMGFGLFD

Annotated regions:
phrase: ARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLN
type: DOMAIN
name: Ribosomal_uL10-like_insert
description: Large ribosomal subunit protein uL10-like, insertion domain
Protein sequence:
MRKFFRGASFYILIFIILLILVQQFARQPQQVVDLEFSRVYKELVNGNVTEISIVDRSIEGALINNNQTVYFRSFIPTVFSNERFTEIIEEQMENQLKVEGAQPPATPWFIELLPSIFMILIFVVFWFVFMQQSQGGGNRVMSFGKSRAKLHKEDDKHKTTFDDVAGLDEEKEELEELVDFLKNPKKYIELGARIPKGILMIGPPGTGKTYLTKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNSPCIIFIDEIDAVGRRRGAGLGGGHDEREQTLNQLLVEMDGFGINEGIIIVAATNRPDILDPALLRPGRFDRQVMVGAPDIKGREAILKVHSRSKPLDKDVDIKVLARRTPGFTPADIENLMNEAALLTARRNEKKIRMATIEEAITKVIAGVEKKSRVISEKERKLTAYHEAGHAVVATLLPNTDPVHQVTIIPRGRAGGFTMILPSEDKYYATKSEMESHIVHLLGGRIAEKLVLHDISTGAQNDLQRVSDIARAMVTKYGMSDKIGPMALGGGDEEVFLGRDITSKRNYSEEVASEVDHEIKRIVDEGYEKAENLLRENMDKLHIIAKALLKMETLDADIYKKIFHGELIIEDEDTVEDVENKFKALKAQEVEKPQDDKEDQEETSIDNQEENQEKDNSDNHKPKDE

Annotated regions:
phrase: IIIVAATNRPDILDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: FYILIFIILLILVQQFARQPQQVVDLEFSRVYKELVNGNVTEISIVDRSIEGALINNNQTVYFRSFIPTVFSNERFTEIIEEQMENQLKVEGA
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular

phrase: IPKGILMIGPPGTGKTYLTKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNSPCIIFIDEIDAVGRRRGAGLGGGHDEREQTLNQLLVEMDGFGINEGIIIVAATNRPDILDPALLRPGRFDRQVMVGAP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: ILMIGPPGTGKTYLTKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNSPCIIFIDEIDAVGRRRGAGLGGGHDEREQTLNQLLVEMDGFGINEGIIIVAATNRPDILDPALLRPGRFDRQVMV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: RVISEKERKLTAYHEAGHAVVATLLPNTDPVHQVTIIPRGRAGGFTMILPSEDKYYATKSEMESHIVHLLGGRIAEKLVLHDISTGAQNDLQRVSDIARAMVTKYGMSDKIGPMALGGGDEEVFLGRDITSKRNYSEEVASEVDHEIKRIVDEGYEKAENLLRENMDKLHIIAKALLKMETLDADIY
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: DVDIKVLARRTPGFTPADIENLMNEAALLTARRNEKKIRMATIE
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain
Protein sequence:
DGYILNSKGCKVSCVVSIVYCNSMCKSSGGSYGYCWTWGLACWCEGLPNSKRWTSSKNKCN

Annotated regions:
phrase: DGYILNSKGCKVSCVVSIVYCNSMCKSSGGSYGYCWTWGLACWCEGL
type: DOMAIN
name: Scorpion_toxin-like
description: Knottin, scorpion toxin-like

phrase: DGYILNSKGCKVSCVVSIVYCNSMCKSSGGSYGYCWTWGLACWCEGLPNSKRWTSSKNKC
type: DOMAIN
name: LCN-type_CS_alpha_beta_dom
description: LCN-type cysteine-stabilized alpha/beta (CS-alpha/beta) domain
Protein sequence:
MTIAVDLQGRPFHFIGIGGIGMSALAQVVTERQLPVSGSDIRRSHITDRLAQLGAQIFDRQAATNLEFFQEAVSAGQSPQVICSTAIHAHNEEYQAAIDLGCPVFHRSDLLAALLRVYESIAVAGTHGKTTTSGLIAYLLYQAGLDPTVVIGGEVNALGGNARLGQGRHLVAEADESDGSLVKLQAAIGIITNIELDHPDHYCDLEAVISTFKTFSDNCSQLIANWDCPTVRDRLPGTISYSLDPARGADYTVDQVSFRGSGTQARIWERGELLGRIHLPLLEAHNLSNALAAIAACRHLGMDFASIREGLAGFEGARRRFEFRGSAQGIQFVDDYAHHPSELAATLAAARLQIDSGCSRLPEVPKRLVAIFQPHRYSRTQAFLAEFAQSFGPADLVLISDIYAAGERNPGQLSGQTLADAIAQYQANVHYAPDLEAVEQRLHQLLQPGDLALFLGAGNLNQVIPRLLDHYACDRSAA

Annotated regions:
phrase: RRFEFRGSAQGIQFVDDYAHHPSELAATLAAARLQIDSGCSRLPEVPKRLVAIFQPHRYSRTQAFLAEFAQSFGPADLVLISDIYAAGERNPGQLSGQTLADAIAQYQANVHYAPDLEAVEQRLHQLLQPGDLALFLGA
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: VAGTHGKTTTSGLIAYLLYQAGLDPTVVIGGEVNALGGNARLGQGRHLVAEADESDGSLVKLQAAIGIITNIELDHPDHYCDLEAVISTFKTFSDNCSQLIANWDCPTVRDRLPGTISYSLDPARGADYTVDQVSFRGSGTQARIWERGELLGRIHLPLLEAHNLSNALAAIAA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: FHFIGIGGIGMSALAQVVTERQLPVSGSDIRRSHITDRLAQLGAQIFDRQAATNLEFFQEAVSAGQSPQVICSTAIHAHNEEYQAAIDLGCPVFHRSDLLAALLR
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain
Protein sequence:
MKTPRIPIAIQQAVMRSLREHLANANRKLERRYAEPTLVYQQRGTSAGTAWLEKNEIRLNPVLLLENQREFIDEVVPHELAHLLVWQHFGRVAPHGKEWKWMMESVLGVPARRTHRFELASVRQNTFPYRCRCQQHQLTVRRHNRVVRGEATYRCVRCGDLLVAEK

Annotated regions:
phrase: REHLANANRKLERRYAEPTLVYQQRGTSAGTAWLEKNEIRLNPVLLLENQREFIDEVVPHELAHLLVWQHFGRVAPHGKEWKWMMESVLGVPARRT
type: DOMAIN
name: SprT-like_domain
description: SprT-like

phrase: TFPYRCRCQQHQLTVRRHNRVVRGEATYRCVRCGDL
type: DOMAIN
name: SprT_Zn_ribbon
description: SprT-like, zinc ribbon domain

phrase: RSLREHLANANRKLERRYAEPTLVYQQRGTSAGTAWLEKNEIRLNPVLLLENQREFIDEVVPHELAHLLVWQHFGRVAPHGKEWKWMMESVLGVPARRTHRFELASVRQNTFPYRCRCQQHQLTVRRHNRVVRGEATYRCVRCGDLLVA
type: DOMAIN
name: SprT-like_domain
description: SprT-like
Protein sequence:
MDVLSPGQGNNTTSPPAPFETGGNTTGISDVTFSYQVITSLLLGTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLVLPMAALYQVLNKWTLGQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVNKRTPRRAAALISLTWLIGFLISIPPMLGWRTPEDRSDPDACTISKDHGYTIYSTFGAFYIPLLLMLVLYGRIFRAARFRIRKTVKKVEKTGADTHHGASPAPQPKKSVNGESGSRNWRLGVESKAGGGLCANGAVRQGDDGAALEVIEVHRVGNSKEHLPLPSEAGPTPCAPASFERKNERNAEAKRKMALARERKTVKTLGIIMGTFILCWLPFFIVALVLPFCESSCHMPTLLGAIINWLGYSNSLLNPVIYAYFNKDFQNAFKKIIKCKFCRQ

Annotated regions:
phrase: GNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLVLPMAALYQVLNKWTLGQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVNKRTPRRAAALISLTWLIGFLISIPPMLGWRTPEDRSDPDACTISKDHGYTIYSTFGAFYIPLLLMLVLYGRIFRAARFRIRKTVKKVEKTGADTHHGASPAPQPKKSVNGESGSRNWRLGVESKAGGGLCANGAVRQGDDGAALEVIEVHRVGNSKEHLPLPSEAGPTPCAPASFERKNERNAEAKRKMALARERKTVKTLGIIMGTFILCWLPFFIVALVLPFCESSCHMPTLLGAIINWLGYSNSLLNPVI
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM
Protein sequence:
MSTNIKIIKKVLNGYVGFANLPKQWHRKSIRRGFSLNIMAIGESGLGKATLINTLFNRDIITSQHDSDEFDEGEEEDVSVKIKSTQAEIEEDGVKLKVSVITAPGFGESINNVEAWKPIVDEINSRFDSYLEAESRINRTAVVDNRVHAFLYFIEPTGHSLRALDIALMKQVHEKVNLIPVIAKSDTLTDEEILEFKHRILADISHQGIKIFKPTDFEYDEEESANTRSIIDSFPFAVVGSTNEVQTPDGRLVRGRKYPWGVIEVDNENHNDFVKLRQLLVRNFLEELKEHTANVLYENYRTEKLKRMGIEQDNTVFREFDPAAKQEEERALHEAKLAKMEAEMKSVFQQKVSEKEKKLQRSEADLFARHKEMKDKLTKQIKLLEEKKAQLEKQKLLPQDPPAQPAPQKSRKGFLR

Annotated regions:
phrase: RGFSLNIMAIGESGLGKATLINTLFNRDIITSQHDSDEFDEGEEEDVSVKIKSTQAEIEEDGVKLKVSVITAPGFGESINNVEAWKPIVDEINSRFDSYLEAESRINRTAVVDNRVHAFLYFIEPTGHSLRALDIALMKQVHEKVNLIPVIAKSDTLTDEEILEFKHRILADISHQGIKIFKPTDFEYDEEESANTRSIIDSFPFAVVGSTNEVQTPDGRLVRGRKYPWGVIEVDNENHNDFVKLRQLLVRNFLEELKEHTANVLYENYRTEKLK
type: DOMAIN
name: G_SEPTIN_dom
description: Septin-type guanine nucleotide-binding (G) domain

phrase: RGFSLNIMAIGESGLGKATLINTLFNRDIITSQHDSDEFDEGEEEDVSVKIKSTQAEIEEDGVKLKVSVITAPGFGESINNVEAWKPIVDEINSRFDSYLEAESRINRTAVVDNRVHAFLYFIEPTGHSLRALDIALMKQVHEKVNLIPVIAKSDTLTDEEILEFKHRILADISHQGIKIFKPTDFEYDEEESANTRSIIDSFPFAVVGSTNEVQTPDGRLVRGRKYPWGVIEVDNENHNDFVKLRQLLVRNFLEELKEHTANVLYENYRTEKLKRMGIEQ
type: DOMAIN
name: G_SEPTIN_dom
description: Septin-type guanine nucleotide-binding (G) domain