nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MQQLNPSEISEIIKGRIDNLDVSSQARNEGTVVSVSDGIVRIHGLADVMYGEMIEFPGGVYGMALNLEQDSVGAVILGAYDTLAEGMSAKCTGRILEVPVGKELLGRVVDALGNPIDGKGPLGNTQTDAVEKVAPGVIWRKSVDQPVQTGYKSVDAMIPVGRGQRELIIGDRQIGKTAMAIDAIINQKNSGIFCVYVAVGQKRSTVANIVRKLEETGALANTIVVVASASESAALQFLAPYAGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESAMFNSGIRPAVNAGVSVSRVGGAAQTKIIKKLSGGIRTALAQYRELAAFAQFASDLDEATRKQLEHGQRVTELMKQKQYAPMSIADMALSLYAAERGFLIDVEVSKIGSFEQALIAFFNRDHAELMAKINVKGDFNDEIDAGLKAGIEKFKATQTW

Annotated regions:
phrase: PAVNAGVSV
type: ACTIVE_SITE
name: ATPase_a/bsu_AS
description: ATPase, alpha/beta subunit, nucleotide-binding domain, active site

phrase: GYKSVDAMIPVGRGQRELIIGDRQIGKTAMAIDAIINQKNSGIFCVYVAVGQKRSTVANIVRKLEETGALANTIVVVASASESAALQFLAPYAGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESAMFNSGIRPAVNAGVSV
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_nucl-bd
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain

phrase: IKKLSGGIRTALAQYRELAAFAQFASDLDEATRKQLEHGQRVTELMKQKQYAPMSIADMALSLYAAERGFLIDVEVSKIGSFEQALIAFFNRDHAELMAKINVKGDFNDEIDAGLKAGIEKFKA
type: DOMAIN
name: ATP_synth_asu_C
description: ATP synthase, alpha subunit, C-terminal

phrase: EGTVVSVSDGIVRIHGLADVMYGEMIEFPGGVYGMALNLEQDSVGAVILGAYDTLAEGMSAKCT
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_N
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain

phrase: QTKIIKKLSGGIRTALAQYRELAAFAQFASDLDEATRKQLEHGQRVTELMKQKQYAPMSIADMALSLYAAERGFLIDVEVSKIGSFEQALIAFFNRDHAELMAKINVKGDFNDEIDAGLKAGIEK
type: DOMAIN
name: ATP_synth_asu_C
description: ATP synthase, alpha subunit, C-terminal

phrase: ILEVPVGKELLGRVVDALGNPIDGKGPLGNTQTDAVEKVAPGVIWRKSVDQPVQTGYKSVDAMIPVGRGQRELIIGDRQIGKTAMAIDAIINQKNSGIFCVYVAVGQKRSTVANIVRKLEETGALANTIVVVASASESAALQFLAPYAGCTMGEFFRDRGEDALIVYDDLSKQAVAYRQISLLLRRPPGREAYPGDVFYLHSRLLERASRVSEEYVEKFTNGAVTGKTGSLTALPIIETQAGDVSAFVPTNVISITDGQIFLESAMFNSGIRPAVNAGVSVSRV
type: DOMAIN
name: ATP_synth_F1_a_nt-bd_dom
description: ATP synthase, F1 complex, alpha subunit nucleotide-binding domain
Protein sequence:
MSRILDNEQMMDEEMVERTLRPQYLQEYIGQDKVKNQLKIFIEAAKLRDEALDHALLFGPPGLGKTTMAFVIANELGVNIKQTSGPVIEKAGDLVAILNDLEPGDVLFIDEIHRLPMAVEEVLYSAMEDFYIDIMIGSGDANRSVHLDLPPFTLIGATTRAGMLSNPLRARFGITGHMEYYEEADLTEIVERTAEIFEMDITHEAAKELALRSRGTPRIANRLLKRVRDYAQIMGNGLIDETITDQALSMLDVDHEGLDYVDQKILRTMIEMYGGGPVGLGTLSVNIAEERETVEDMYEPYLIQKGFIMRTRTGRVATRKAYEHLGYEYMEK

Annotated regions:
phrase: YEEADLTEIVERTAEIFEMDITHEAAKELALRSRGTPRIANRLLKRVRDYAQIMGNGLIDETITDQALSMLDV
type: DOMAIN
name: AAA_lid_4
description: RuvB, AAA lid domain

phrase: LRPQYLQEYIGQDKVKNQLKIFIEAAKLRDEALDHALLFGPPGLGKTTMAFVIANELGVNIKQTSGPVIEKAGDLVAILNDLEPGDVLFIDEIHRLPMAVEEVLYSAMEDFYIDIMIGSGDANRSVHLDLPPFTLIGATTRAGMLSNPLRARFGITGH
type: DOMAIN
name: RuvB-like_N
description: RuvB-like P-loop domain

phrase: ALDHALLFGPPGLGKTTMAFVIANELGVNIKQTSGPVIEKAGDLVAILNDLEPGDVLFIDEIHRLPMAVEEVLYSAMEDFYIDIMIGSGDANRSVHLDLPPFTLIGATTRAGMLSNPLRARFGITGHM
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: EGLDYVDQKILRTMIEMYGGGPVGLGTLSVNIAEERETVEDMYEPYLIQKGFIMRTRTGRVATRKAYEH
type: DOMAIN
name: RuvB_C
description: RuvB C-terminal winged helix domain
Protein sequence:
MSLKHFIQDALSSWMKQKGPESDIVLSSRIRLARNFEHIRFPTRYSNEEASSIIQQFEDQFSEQEIPGIGKFVLIRMNDAQPLEKRVLVEKHLISPNLTESPFGGCLLSENEEVSVMLNEEDHIRIQCLFPGFQLLEAMKAANQVDDWIEEKVDYAFNEQRGYLTSCPTNVGTGLRASVMMHLPALVLTRQINRIIPAINQLGLVVRGIYGEGSEAVGNIFQISNQITLGKSEQDIVEDLNSVAAQLIEQERSAREAIYQTSKIELEDRVYRSYGVLSNCRMIESKETAKCLSDVRLGIDLGIIKGLSSNILNELMILTQPGFLQQYSGGALRPNERDIRRAALIRERLHLEMNGKRQEDESI

Annotated regions:
phrase: IVLSSRIRLARNFEHIRFPTRYSNEEASSIIQQFEDQFSEQEIPGIGKFVLIRMNDAQPLEKRVLVEKHLISPNLTESPFGGCLLSENEEVSVMLNEEDHIRIQCLFPGFQLLEAMKAANQVDDWIEEKVDYAFNEQRGYLTSCPTNVGTGLRASVMMHLPALVLTRQINRIIPAINQLGLVVRGIYGEGSEAVGNIFQISNQITLGKSEQDIVEDLNSVAAQLIEQERS
type: DOMAIN
name: ATP-guanido_PTrfase_cat
description: ATP:guanido phosphotransferase, catalytic domain

phrase: IIQQFEDQFSEQEIPGIGKFVLIRMNDAQPLEKRVLVEKHLISPNLTESPFGGCLLSENEEVSVMLNEEDHIRIQCLFPGFQLLEAMKAANQVDDWIEEKVDYAFNEQRGYLTSCPTNVGTGLRASVMMHLPALVLTRQINRIIPAINQLGLVVRGIYGEGSEAVGNIFQISNQITLGKSEQDIVEDLNSVAAQLIEQER
type: DOMAIN
name: ATP-guanido_PTrfase_cat
description: ATP:guanido phosphotransferase, catalytic domain

phrase: CPTNVG
type: ACTIVE_SITE
name: ATP-guanido_PTrfase_AS
description: ATP:guanido phosphotransferase active site
Protein sequence:
MSLCGARANAKMMAAYNGGTSAAAAGHHHHHHHHLPHLPPPHLHHHHHPQHHLHPGSAAAVHPVQQHTSSAAAAAAAAAAAAAMLNPGQQQPYFPSPAPGQAPGPAAAAPAQVQAAAAATVKAHHHQHSHHPQQQLDIEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDYFEEIYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGPHKQPSLPVLYTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPYLDEGRLRYHTCMCKCCFSTSTGRVYTSDFEPITNPKFDDTFEKNLSSVRQVKEIIHQFILEQQKGNRVPLCINPQSAAFKSFISSTVAQPSEMPPSPLVWE

Annotated regions:
phrase: DRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDYFEEIYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGPHKQPSLPVLYTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPY
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: ILHRDIKPGNLL
type: ACTIVE_SITE
name: Ser/Thr_kinase_AS
description: Serine/threonine-protein kinase, active site

phrase: FQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDYFEEIYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSN
type: CONSERVED_SITE
name: MAP_kinase_CS
description: Mitogen-activated protein (MAP) kinase, conserved site

phrase: IEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDYFEEIYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGPHKQPSLPVLYTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPY
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: IGYGAFGVVWSVTDPRDGKRVAL
type: BINDING_SITE
name: Protein_kinase_ATP_BS
description: Protein kinase, ATP binding site

phrase: IEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDYFEEIYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEELDESRHMTQEVVTQYYRAPEILMGSRHYSNAIDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRTACEGAKAHILRGPHKQPSLPVLYTLSSQATHEAVHLLCRMLVFDPSKRISAKDALAHPY
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain
Protein sequence:
MANRKKQSKGKDKDSGWEERVVQVKRVTKVVKGGKKLSFRVILVIGNEQGQVGVGVGKASDVIGAVKKGVTDAKKHLVTVPLTKSNSIPHPINGISGAAKVILRPSAPGSGVIAGGSVRTVLELSGVQNILAKQLGSNNTLNNARAVLNGLTQLRTFSEAAKDRGVPIESLYST

Annotated regions:
phrase: WEERVVQVKRVTKVVKGGKKLSFRVILVIGNEQGQVGVGVGKASDVIGAVKKGVTDAKKHLVT
type: DOMAIN
name: Ribosomal_uS5_N
description: Small ribosomal subunit protein uS5, N-terminal

phrase: SGAAKVILRPSAPGSGVIAGGSVRTVLELSGVQNILAKQLGSNNTLNNARAVLNGLTQLRTFSEAAKD
type: DOMAIN
name: Ribosomal_uS5_C
description: Small ribosomal subunit protein uS5, C-terminal

phrase: GKKLSFRVILVIGNEQGQVGVGVGKASDVIGA
type: CONSERVED_SITE
name: Ribosomal_uS5_N_CS
description: Small ribosomal subunit protein uS5, N-terminal, conserved site

phrase: WEERVVQVKRVTKVVKGGKKLSFRVILVIGNEQGQVGVGVGKASDVIGAVKKGVTDAKKHLVTV
type: DOMAIN
name: Ribosomal_uS5_N
description: Small ribosomal subunit protein uS5, N-terminal
Protein sequence:
MFWQRKDLLGLRYLTPEEINLILDTAVPMKEIIGRKIKKTPTLRGRSMVTLFYENSTRTRSSFDLAGKFLSADTVGLTASSSSVAKGESLRDTGLTLTAMGVDVVVMRHPASGAAEYLAKCIPAAVINAGDGTHEHPTQALLDMFTIREKKGSMAGLKVVIVGDILHSRVARSNIWGLTKMGAEVRVVGPITLMPKDIEKMGVKVYHRLEDALEGADVVNVLRIQLERQQQGLFPSLREYSRLYGINQKRLELTASDAIILHPGPMNRGVEIEHQVAYGNRSFINEQVTNGVAVRMALLYLLTGGEYHALSN

Annotated regions:
phrase: GLKVVIVGDILHSRVARSNIWGLTKMGAEVRVVGPITLMPKDIEKMGVKVYHRLEDALEGADVVNVLRIQLERQQQGLFPSLREYSRLYGINQKRLELTASDAIILHPGPMNRGVEIEHQVAYGNRSFINEQVTNGVAVRMALLYL
type: DOMAIN
name: Asp_carbamoyltransf_Asp/Orn-bd
description: Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain

phrase: KDLLGLRYLTPEEINLILDTAVPMKEIIGRKIKKTPTLRGRSMVTLFYENSTRTRSSFDLAGKFLSADTVGLTASSSSVAKGESLRDTGLTLTAMGVDVVVMRHPASGAAEYLAKCIPAAVINAGDGTHEHPTQALLDMFTIR
type: DOMAIN
name: Asp/Orn_carbamoyltranf_P-bd
description: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding
Protein sequence:
MSSEEKIEETQQQQQESVPVKELLLKVQLPSFFNVGDDYLTIPSSYEENIADLKQALNIIVLCRNLTNYSILIKGIDIIENFGELITFEQIISHFELDKQEEQEEQGQEREISELKIVIKEKSYNLASIYEQISRFREVIGLHYIDRLSNDIGSCGGVSKFNGIQLDDIKPKEAKKEESTEKEQQEKEELSISKEEVSKISDFAKQFISDSFDGNDFTKLTKFDDINGKVKIPIKSLTISQWSPVPPFQQAKGDLLYLSLQTLEHETFNITCHFSGFFVNKSSTINFNPTIKINEKGKFNKSYLLYDLVCQLSPLFSKTIAENEINLSDSTKYPETYLLPGNSFPAYPWLVNEKDLQNVPDLSRSQLSSLINGVDGADYIKDWNNDIQSIKELPTTTVQERIIREKLIQKSLFEFNKTATETAINIIKGNIPPLNPDESSDKFIYLRNGIFYSSGTSTVNGFENTGGEEASRYVASKDLTGIKLINRHDIRGISSLVTCIVDYMGKRVVCQAPVPGILDTPVITSPTTDAEGKNEAEEPESEPVEKVVYGLSSDGSRILEDKSFEEPLKQIGDFFHLKPHKVQLSSSSSGDDVKTESNLVVSKDTKGLKGTDGRKYVIDLYRTTPRDIEFIEQHFKLDDDHQETSYPHGEALIRHEAVNEWWRRKVAVLFKKETEQLEKEGKLLDKNQDQDQENKPQIAIPTDQVVFNPDAFSSDNENEIEQDREEVREISKFIKEKLIEEFLDEIKDQVIPFDGQQLTDVLHRSGINMRYLGYVAERLVVKKEKHLVDLEELIKENEAKAEKKREEEKEKEEKEATESEDKKEKKEDKEDAEKEEAEAEEEVPTKATYQLTLANYSTLHRIIIQEMISRSVKHILRNLTKSLPSYLISTAIAHFHNCLFGGAINPTPKVDFIDEIYKNFCSKSDLESFIKLTHDDVIKLVSKEVFSRFRYKLSSNWINTIQLPQLFREIAFKYGIQWKSQNYPFTKEEFELQNNQNKETPTQIQIIETKSSKKSKKKTQTQVITEKSIQRSSIFIADDIIGFIPIIKDSSYKSTIVEEIYSNARSHLVQGNKEMGMALFNELLAINESIYGKVNPETAKFYNLVAQVYQELGYDIEAALIGRKAVILCERSCGFDSYDTITAYMNSAYYESSNEQYLNSLKLYKEAMNTWSLVYGKDHPTLINTLTNLSESLLKIKAYDSALELLQEALEITKKLNGEISEITGFIYYRIANIVVTLNKFKESKELFDKAYDIFMKLLGPDDSMTKQVAKYVSSVGLYVEYLKRQQQQQQQETQKKSKTKTKAAPVNNIATTSTSTTKNGKKSKKNNTPPQSNPEIANQSIDEILRFIEGKPSGSKKSNKKK

Annotated regions:
phrase: PFDGQQLTDVLHRSGINMRYLGYVAERLVVKKEKHLVDLEELIKENEAKAEKKREEEKEKEEKEATESEDKKEKKEDKEDAEKEEAEAEEEVPTKATYQLTLANYSTLHRIIIQEMISRSVKHILRNLTKSLPSYLISTAIAHFHNCLFGGAINPTPKVDFIDEIYKNFCSKSDLESFIKLTHDDVIKLVSKEVFSRFRYKLSSNWINTIQLPQLFREIAFKYGIQWKSQNYP
type: DOMAIN
name: CLU-central
description: CLU central domain

phrase: GFIYYRIANIVVTLNKFKESKELFDKAYDIFMK
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: INTLTNLSESLLKIKAYDSALELLQEALEITKK
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: VEEIYSNARSHLVQGNKEMGMALFNELLAINES
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: DWNNDIQSIKELPTTTVQERIIREKLIQKSLFEFNKTATETAINIIKGNIPPLNPDESSDKFIYLRNGIFYSSGTSTVNGFENTGGEEASRYVASKDLTGIKLINRHDIRGISSLVTCIVDYMGKRVVCQAPVPGILDTPVITSPTTDAEGKNEAEEPESEPVEKVVYGLSSDGSRILEDKSFEEPLKQIGDFFHLKPHKVQLSSSSSGDDVKTESNLVVSKDTKGLKGTDGRKYVIDLYRTTPRDIE
type: DOMAIN
name: CLU_dom
description: CLU domain

phrase: YEENIADLKQALNIIVLCRNLTNYSILIKGIDIIENFGELITFEQIISHFELDKQEEQEEQGQEREISELKIVIKEKSYNLASIYEQISRFREV
type: DOMAIN
name: CLU_N
description: Clustered mitochondria protein, N-terminal

phrase: DLSRSQLSSLINGVDGADYIKDWNNDIQSIKELPTTTVQERIIREKLIQKSLFEFNKTATETAINIIKGNIPPLNPDESSDKFIYLRNGIFYSSGTSTVNGFENTGGEEASRYVASKDLTGIKLINRHDIRGISSLVTCIVDYMGKRVVCQAPVPGILDTPVITSPTTDAEGKNEAEEPESEPVEKVVYGLSSDGSRILEDKSFEEPLKQIGDFFHLKPHKVQLSSSSSGDDVKTESNLVVSKDTKGLKGTDGRKYVIDLYRTTPRDIEF
type: DOMAIN
name: CLU_dom
description: CLU domain

phrase: VIPFDGQQLTDVLHRSGINMRYLGYVAERLVVKKEKHLVDLEELIKENEAKAEKKREEEKEKEEKEATESEDKKEKKEDKEDAEKEEAEAEEEVPTKATYQLTLANYSTLHRIIIQEMISRSVKHILRNLTKSLPSYLISTAIAHFHNCLFGGAINPTPKVDFIDEIYKNFCSKSDLESFIKLTHDDVIKLVSKEVFSRFRYKLSSNWINTIQLPQLFREIAFKYGIQWKSQNYP
type: DOMAIN
name: CLU-central
description: CLU central domain
Protein sequence:
MSLATIAENYMMHNGNQRAIVPYVPPPYAYANAPTLGGQAGEMESMSLGILNQAMSSTTGASRALKDEKAAFGAMAEALRDPEPIRQIKKHVGLRTLKHLKIELASMRRRYAILRVVIFMSGCVTMATSMAGGLTIIDNEIYEDLSGDGWLSKTIHGLNLLCTTMLLAAGKISDKIQEEISRTKRDIAKRESYVSAASMSWSGDTSVLLKEVKYGDS

Annotated regions:
Protein sequence:
MEKKDLRSIVGQEMLDFLAKHKQKPFRAKQVNQWLWERGATNIRQMKNLPGTLLDVLEEAFEIPAASVQNAQTATDGTSKVAFEFHDGQLAEGVYIPSRKRVTACVSSQTGCNLNCAFCATGQLTHGRNLTAGEIFDQVVAIKNMAEEQGNRLTNIVYMGMGEPLLNYDNVLQSVDYITGKPGLEMSPSRITVSTAGIVPGIMKLADDKVRFHLAISLHSAIDETRNRLMPINKKYPLDALSEAIQYFHEKTGERITFEYLMLRGVNDSLDEAAALARFCKSFPVKINLIEYNPVEAFDLKPSTQETVNDFVQFLEKRNMIVNVRRSKGQQIDAACGQLANRNVNS

Annotated regions:
phrase: RSIVGQEMLDFLAKHKQKPFRAKQVNQWLWERGATNIRQMKNLPGTLLDVLEEAFE
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: SSQTGCNLNCAFCATGQLTHGRNLTAGEIFDQVVAIKNMAEEQGNRLTNIVYMGMGEPLLNYDNVLQSVDYITGKPGLEMSPSRITVSTAGIVPGIMKLADDKVRFHLAISLHSAIDETRNRLMPINKKYPLDALSEAIQYFHEKTGERITFEYLMLRGVNDSLDEA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SRKRVTACVSSQTGCNLNCAFCATGQLTHGRNLTAGEIFDQVVAIKNMAEEQGNRLTNIVYMGMGEPLLNYDNVLQSVDYITGKPGLEMSPSRITVSTAGIVPGIMKLADDKVRFHLAISLHSAIDETRNRLMPINKKYPLDALSEAIQYFHEKTGERITFEYLMLRGVNDSLDEAAALARFCKSFPVKINLIEYNPVEAFDLKPSTQETVNDFVQFLEKRNMIVNVRRSKGQ
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VTACVSSQTGCNLNCAFCATGQLTHGRNLTAGEIFDQVVAIKNMAEEQGNRLTNIVYMGMGEPLLNYDNVLQSVDYITGKPGLEMSPSRITVSTAGIVPGIMKLADDKVRFHLAISLHSAIDETRNRLMPINKKYPLDALSEAIQYFHEKTGERITFEYLMLRGVNDSLDEAAALARFCKSFPVKINLIEYNPVEAFDLKPSTQETVNDFV
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain
Protein sequence:
MTFAASVVRTAEGDGFTPPGPHDFDLPAIGGGHDTFEMFGQSFVLGVTKPMLQLVLAAIVLFVFFFAAARKRAMVPSRLQFVGEGFYGFVRNSLGRDIIGHDFAKFVPYLFTLFFFILLNNAFGSIPFIEFPTFSRSGMVYGLAVLSWVIYNAAGISKHGFVGYLKLQTVPGGIRGPILALLIPLEFMSNILVRPVTLALRLFANMFAGHLLLILFALGGEYILTEMSVQYAPVGILAWLMFVAVAFLEMLIQFLQAYVFVLLNAMYISGAVADEH

Annotated regions:
phrase: TLALRLFAN
type: ACTIVE_SITE
name: ATP_synth_F0_asu_AS
description: ATP synthase, F0 complex, subunit A, active site
Protein sequence:
MSEVEGGIINRKLQGEFVNTFIRQLKFHREDFKNIGYIGGFTSIIDMGNFGITFNNDGVGTKAMIAEAVNKYDTLGIDCVAMNVNDAITVGSEPIAMVDYLAVNKMDEEMAKQLGTGFNVGAQMANISIVGGETAVLPDVVKHIDISGAVIGIVQKNQIITGSNIKEGDVIIGLGSSGLHSNGFTTVRKIIADNNLDLQDTFPGDSKKTYEVLLEPTRIYVREILDIMGIITIKGMANITGGGFKNITRMKDMKYVIDDPFEPQNVFIRLMEMGNLNYAQMFEIFNMGTGFVLVIDEDEKVDIMNALKGKVPVKVMGHVENGSGVEIPKYEVSLKGYY

Annotated regions:
phrase: GNFGITFNNDGVGTKAMIAEAVNKYDTLGIDCVAMNVNDAITVGSEPIAMVDYLAVNKMDEEMAKQLGTGFNVGAQMANISIVGGETAVLPDVVKHIDISGAVIGI
type: DOMAIN
name: PurM-like_N
description: PurM-like, N-terminal domain

phrase: KEGDVIIGLGSSGLHSNGFTTVRKIIADNNLDLQDTFPGDSKKTYEVLLEPTRIYVREILDIMGIITIKGMANITGGGFKNITRMKDMKYVIDDPFEPQNVFIRLMEMGNLNYAQMFEIFNMGTGFVLVIDEDEKVDIMNALKGKVPVKVMGHVENGSGV
type: DOMAIN
name: PurM-like_C_dom
description: PurM-like, C-terminal domain
Protein sequence:
MNAVTIVIASMCILAIAYRLYGTFMMVKVLKVNDDKPTPAHALEDGKDYVPTNKWVSFGHHFAAIAAAGPLVGPILAAQFGYLPGLLWLLIGAVIGGAVHDIVVLFASMRKNGKSLSEVAKDELGPVAGFCTGLSMLFIITITMAGLSMVVLHALERNPWGTFAVGITIPIAMGVGLFYKKTGNLKLASTVGFLFLMAGVFIGPWVQTTALGDFLTLDTKTLAIALPVYAFFAAALPVWLLLAPRDYLSSFMKIGVFIALIVGVFVVNPSIPFPAFTEFVKGGGPVLAGPVWPFISITIACGAISGFHAFVGSGTTPKMLNKWSDMKPVAFGAMLVECLVGIMALIAATALQPADYFAINSTPEVFRTLGMNVVHLPELSGEIGLDLEGRTGGAVTLAVGMTYIFTGMPFFSHLASYFFQFVIMFEAVFILTAIDAGTRVARYLIQDFFGEVYKPLKKTDWIPGSVFASALACLMWGYLLYSGDIGSIWALFGVSNQLMASVGLIIGATIVLKIADKRRYILTCLIPLAYLYVTVNYAGYWMVRNVYLNPEAAGYSVLNGVLSIIMLVLGFIIIVAAVKKWAQMWKDPSLRMEASIPG

Annotated regions:
phrase: NAVTIVIASMCILAIAYRLYGTFMMVKVLKVNDDKPTPAHALEDGKDYVPTNKWVSFGHHFAAIAAAGPLVGPILAAQFGYLPGLLWLLIGAVIGGAVHDIVVLFASMRKNGKSLSEVAKDELGPVAGFCTGLSMLFIITITMAGLSMVVLHALERNPWGTFAVGITIPIAMGVGLFYKKTGNLKLASTVGFLFLMAGVFIGPWVQTTALGDFLTLDTKTLAIALPVYAFFAAALPVWLLLAPRDYLSSFMKIGVFIALIVGVFVVNPSIPFPAFTEFVKGGGPVLAGPVWPFISITIACGAISGFHAFVGSGTTPKMLNKWSDMKPVAFGAMLVECLVGIMALIAATALQPADYFAINSTPEVFRTLGMNVVHLPELSGEIGLDLEGRTGGAVTLAVGMTYIFTGMPFFSHLASYFFQFVIMFEAVFILTAIDAGTRVARYLIQDFFGEVYKPLKKTDWIPGSVFASALACLMWGYLLYSGDIGSIWALFGVSNQLMASVGLIIGATIVLKIADKRRYILTCLIPLAYLYVT
type: DOMAIN
name: CstA_N
description: CstA, N-terminal domain
Protein sequence:
MKKYQQLAEQLREQIASGIWQPGDRLPSLRDQVALSGMSFMTVSHAYQLLESQGYIIARPQSGYYVAPQAIKMPKAPVIPVTRDEAVDINTYIFDMLQASRDPSVVPFASAFPDPRLFPLQQLNRSLAQVSKTATAMSVIENLPPGNAELRQAIARRYALQGITISPDEIVITAGALEALNLSLQAVTEPGDWVIVENPCFYGALQALERLRLKALSVATDVKEGIDLQALELALQEYPVKACWLMTNSQNPLGFTLTPQKKAQLVALLNQYNVTLIEDDVYSELYFGREKPLPAKAWDRHDGVLHCSSFSKCLVPGFRIGWVAAGKHARKIQRLQLMSTLSTSSPMQLALVDYLSTRRYDAHLRRLRRQLAERKQRAWQALLRYLPAEVKIHHNDSGYFLWLELPEPLDAGELSLAALTHHISIAPGKMFSTGENWSRFFRFNTAWQWGEREEQAVKQLGKLIQERL

Annotated regions:
phrase: KYQQLAEQLREQIASGIWQPGDRLPSLRDQVALSGMSFMTVSHAYQLLESQGYIIARPQSGYY
type: DOMAIN
name: Tscrpt_reg_HTH_GntR
description: Transcription regulator HTH, GntR

phrase: LAEQLREQIASGIWQPGDRLPSLRDQVALSGMSFMTVSHAYQLLESQGYIIARPQSGYY
type: DOMAIN
name: Tscrpt_reg_HTH_GntR
description: Transcription regulator HTH, GntR

phrase: KKYQQLAEQLREQIASGIWQPGDRLPSLRDQVALSGMSFMTVSHAYQLLESQGYIIARPQSGYYV
type: DOMAIN
name: Tscrpt_reg_HTH_GntR
description: Transcription regulator HTH, GntR

phrase: MKKYQQLAEQLREQIASGIWQPGDRLPSLRDQVALSGMSFMTVSHAYQLLESQGYIIARPQSGYYVAP
type: DOMAIN
name: Tscrpt_reg_HTH_GntR
description: Transcription regulator HTH, GntR

phrase: ENLPPGNAELRQAIARRYALQGITISPDEIVITAGALEALNLSLQAVTEPGDWVIVENPCFYGALQALERLRLKALSVATDVKEGIDLQALELALQEYPVKACWLMTNSQNPLGFTLTPQKKAQLVALLNQYNVTLIEDDVYSELYFGREKPLPAKAWDRHDGVLHCSSFSKCLVPGFRIGWVAAGKHARKIQRLQLMSTLSTSSPMQLALVDYLSTRRYDAHLRRLRRQLAERKQRAWQALLRYLPAEVKIHHNDSGYFLWLELPEPLDAGELSLAALTHHISIAPGKMFSTGENWSRFFRFN
type: DOMAIN
name: Aminotransferase_I/II_large
description: Aminotransferase, class I/classII, large domain
Protein sequence:
MSRVAKNPVKLPSGVEVKLVGQLLSVKGAKGTLELNIHSSVEVVVEAGELRFVARNGDQQTRAMAGTTRALVNNMVQGVSQGFERKLQLVGVGYKAQAKGTVLNLALGFSHPVDYELPNGITAETPSQTDILIRGIDKQLVGQVAAEIRDFRRPEPYKGKGVRYADEVVRRKEAKKK

Annotated regions:
phrase: PEPYKGKG
type: CONSERVED_SITE
name: Ribosomal_uL6_CS
description: Large ribosomal subunit protein uL6, conserved site

phrase: PSGVEVKLVGQLLSVKGAKGTLELNIHSSVEVVVEAGELRFVARNGDQQTRAMAGTTRALVNNMVQGVSQ
type: DOMAIN
name: Ribosomal_uL6_a/b-dom
description: Large ribosomal subunit protein uL6, alpha-beta domain

phrase: VGVGYKAQAKGTVLNLALGFSHPVDYELPNGITAETPSQTDILIRGIDKQLVGQVAAEIRDFRRPEPYKGKGVR
type: DOMAIN
name: Ribosomal_uL6_a/b-dom
description: Large ribosomal subunit protein uL6, alpha-beta domain
Protein sequence:
MTKFIFITGGVVSSLGKGICTASIGCLLEARGFKVTMLKFDPYINVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERYSTATMSRNNNATTGQIYSTVIAKERHGDYLGRTVQVVPHITDEIKSRVYKLATKHDVDVVLTEIGGTVGDIESLPFLEAIRQIPFEVGRSNCLYIHLTLIPMIHAAGEMKTKPTQHSVKDLREIGIQPDLLVCRTEKKFTESARDKIALFCNVDPAAVIQAIDLAEIYEIPLMLHEQKLDEIIVKRLNLPERVADLSAWTNMVNRSKARARRVSVGIVGKYIELQDSYKSIYEALRHAGFANDVVVDVVRIDSESQNGDFLIDALDKVTGVLIPGGFGLRGIKGKIRAAQYARENKKPFLGICLGMQCALIEFARNICGLENANSLEFDPETPHPVVSLMEEQKKNANFGGTMRLGAYPCRLIKDTFAAAAYGGADTVSERHRHRFELNNKYLPLIQEKGLRIAGINEQSQLVEIIEMPNHPWFVGVQFHPEFKSSPLNPHPLFREFIRAVVANTVNK

Annotated regions:
phrase: VSVGIVGKYIELQDSYKSIYEALRHAGFANDVVVDVVRIDSESQNGDFLIDALDKVTGVLIPGGFGLRGIKGKIRAAQYARENKKPFLGICLGMQCALIEFARNICGLENANSLEFDPETPHPVVSLMEEQKKNANFGGTMRLGAYPCRLIKDTFAAAAYGGADTVSERHRHRFELNNKYLPLIQEKGLRIAGINEQSQLVEIIEMPNHPWFVGVQFHPEFKSSPLNPHPLFREF
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain

phrase: KFIFITGGVVSSLGKGICTASIGCLLEARGFKVTMLKFDPYINVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERYSTATMSRNNNATTGQIYSTVIAKERHGDYLGRTVQVVPHITDEIKSRVYKLATKHDVDVVLTEIGGTVGDIESLPFLEAIRQIPFEVGRSNCLYIHLTLIPMIHAAGEMKTKPTQHSVKDLREIGIQPDLLVCRTEKKFTESARDKIALFCNVDPAAVIQAIDLAEIYEIPLMLHEQKLDEIIV
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: LQDSYKSIYEALRHAGFANDVVVDVVRIDSESQNGDFLIDALDKVTGVLIPGGFGLRGIKGKIRAAQYARENKKPFLGICLGMQCALIEFARNICGLENANSLEFDPETPHPVVSLMEEQKKNANFGGTMRLGAYPCRLIKDTFAAAAYGGADTVSERHRHRFELNNKYLPLIQEKGLRIAGINEQSQLVEIIEMPNHPWFVGVQFHPEFKSSPLNPHPLFREFI
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: KFIFITGGVVSSLGKGICTASIGCLLEARGFKVTMLKFDPYINVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERYSTATMSRNNNATTGQIYSTVIAKERHGDYLGRTVQVVPHITDEIKSRVYKLATKHDVDVVLTEIGGTVGDIESLPFLEAIRQIPFEVGRSNCLYIHLTLIPMIHAAGEMKTKPTQHSVKDLREIGIQPDLLVCRTEKKFTESARDKIALFCNVDPAAVIQAIDLAEIYEIPLMLHEQKLDEIIVKRLN
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal
Protein sequence:
MKGSTLREGTAMASPLPQDMEEELAPVGSEPGDPRAKPPVKPKPRGLPSKPALPAKPSLLVPVGPRPPRGPLAELPSARKMNMLAGPQPYGVSKRPLPFAPRPSAEATAGGDVTQESGKEDAGKEDLPPLTPPARCAALGGVRKAPAPFRPSSERFAACTVEEILAKMEQPRKEILASPDRLWGSRLTFNHDGSSRYGPRTYGAPCPREEDSKSPAKGRSQEGTAEIPAECQEEHSKTPEERNLTSSPAMNGDLAKLACSEAPTDVSKTWVTSSADPVSEHGGSTSAVRLANISVPASESPRLSSRPSSPCHSQLSETQSPAASEASSICLPVTPASPSAVLPAEPPGHSPSSELPAEAAPETLSPNSSPVETVSGHHSPEQPPVLLPQLLTEGAELPDITRTFPCGEEAAARGHTESRPSSLAQRRFSEGVLQPPSQDQEKLGGSLATLPQGQGSQSALDRPFGSGTESNWSLSQSFEWTFPTRPSGLGVWRLDSPPPSPITEASEAAEAAEADSWAVSGRGEGVSQVGPGTPPAPESPRKPISGVQGNDPGISLPQRDDGESQPRSPALLPSTVEGPPGAPLLQAKENYEDQEPLVGHESPITLAAREAALPVLEPALGQQQPTPSDQPCILFVDVPDPEQALSTEEDVVTLGWAETTLPMTEAQEPCSVSPEPTGPESSSRWLDDLLASPPPNSGSARRAAGAELKDRQSPSTCSEGLLGWAQKDLQSEFGVATDSHHSSFGSSSWSQDTSQNYSLGGRSPVGDT

Annotated regions:
Protein sequence:
MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYADEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLDDAAQILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWFDAASGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLSKVRAVCRVPLIASGGAGTMEHFLEAFRDASVDGALAASVFHKQIINIGELKTYLAAQGVEIRVC

Annotated regions:
Protein sequence:
MMQRVVLHIDMDYFFAAIEERENPELREKAVVVCMLSGRSELSGSVSTCNYVAREFGIRSGMPCSRAKKLNPEAVFLPVRKDFYTSVSDRIMEILRSYADPGNGDSFEQISVDEAFLESSERTGGDFRLAFEVGMQIKKEIKEKENLTCSIGIGPNKLISKMASSAKKPDGITVVSPQDLEAFLWPLNVSKLWGIGSVTAGKLQEMGIVTVKDLAERDVIELISIFGKSRGTWLKQAASGIDDSPLKERDGSEQIGRIATLPEDSLDKKLISSLIERLAGDVIEKLDSRELSFRIVTVTVINSNFRMYTKSRTLSHPVSSKEVLLQVSGEILDEFLSENRTEFRRVGVRVGGLQKKKGQKSLFDY

Annotated regions:
phrase: IDMDYFFAAIEERENPELREKAVVVCMLSGRSELSGSVSTCNYVAREFGIRSGMPCSRAKKLNPEAVFLPVRKDFYTSVSDRIMEILRSYADPGNGDSFEQISVDEAFLESSERTGGDFRLAFEVGMQIKKEIKEKENLTCSIGIGPNKLISKMA
type: DOMAIN
name: UmuC
description: UmuC domain

phrase: EQIGRIATLPEDSLDKKLISSLIERLAGDVIEKLDSRELSFRIVTVTVINSNFRMYTKSRTLSHPVSSKEVLLQVSGEILDEFLSENRTEFRRVGVRVGGLQKKKGQK
type: DOMAIN
name: DNA_pol_Y-fam_little_finger
description: DNA polymerase, Y-family, little finger domain

phrase: PQDLEAFLWPLNVSKLWGIGSVTAGKLQEMG
type: CONSERVED_SITE
name: PolY_HhH_motif
description: DNA polymerase type-Y, HhH motif

phrase: VLHIDMDYFFAAIEERENPELREKAVVVCMLSGRSELSGSVSTCNYVAREFGIRSGMPCSRAKKLNPEAVFLPVRKDFYTSVSDRIMEILRSYADPGNGDSFEQISVDEAFLESSERTGGDFRLAFEVGMQIKKEIKEKENLTCSIGIGPNKLISKMASSAKKPDGITVVSPQDLEAFLWPLNVSKLWGI
type: DOMAIN
name: UmuC
description: UmuC domain
Protein sequence:
MSHQPKPLSEVEHIKTQSRLLRGSLAESLEDPVTGGLATPDTNLIKFHGSYQQDDRDVREERRQQKLEPDYSFMLRTRLPGGVCTPAQWLVMDALAREHANHTLRITTRQAFQLHGVIKDDLRPTIARINEAMMDTLAACGDVNRNVLCNPNPVDSRVHETVYQWAVRISEHLLPKTRAYYEVWLGKEKVAGGEDEPIYGATYLPRKFKAAVAVPPLNDVDVFAQDLGFIAIIEGDALVGFNVSVGGGMGATHGDAATYPRLADVVGFIPPEQTLAVAEEVVKIHRDFGDRTNRKHARLKYVLEERGVPWFTAELEKRLGFPLQPARPFAFEHNGDRFGWTEGHDGRWHLTLHLDSGRVADRPGAPHLTGLREIARIHTGDFRLTANQNLVIAGVTPEARDAIGALVTAHALDSFRSASPVRRNALACVALPTCGLAMAEAERYLPTFVGRLEDRLRAHGLQDANLLLRITGCPNGCARPYLAEVGLVGKAPGRYNLHLGGDARGQRLSHLYRENIDEDAILAALEPLFEGYARERQPGEGFGDFVVRAGHVPSPAVQPRPS

Annotated regions:
phrase: ISEHLLPKTRAYYEVWLGKEKVAGGEDEPIYGATYLPRKFKAAVAVPPLNDVDVFAQDLGFIAIIEGDALVGFNVSVGGGMGATHGDAATYPRLADVVGFIPPEQTLAVAEEVVKIHRDFGDRTNRKHARLKYVLEERGVPWFTAELEKRLGF
type: DOMAIN
name: NO2/SO3_Rdtase_4Fe4S_dom
description: Nitrite/sulphite reductase 4Fe-4S domain

phrase: TGCPNGCARPYLAEVG
type: BINDING_SITE
name: NO2/SO3_Rdtase_FeS/sirohaem_BS
description: Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site

phrase: RNALACVALPTCGLAMAE
type: BINDING_SITE
name: NO2/SO3_Rdtase_FeS/sirohaem_BS
description: Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site

phrase: TGCPNGCARPYLAEVGLV
type: BINDING_SITE
name: NO2/SO3_Rdtase_FeS/sirohaem_BS
description: Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site

phrase: HDGRWHLTLHLDSGRVADRPGAPHLTGLREIARIHTGDFRLTANQNLVIAGVTPEARDA
type: DOMAIN
name: NiRdtase/SiRdtase_haem-b_fer
description: Nitrite/Sulfite reductase ferredoxin-like domain

phrase: PDYSFMLRTRLPGGVCTPAQWLVMDALAREHANHTLRITTRQAFQLHGVIKDDLRPTIARINE
type: DOMAIN
name: NiRdtase/SiRdtase_haem-b_fer
description: Nitrite/Sulfite reductase ferredoxin-like domain