nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTVTMKVMDKKSKRSWTLCIVMALIIPCLNCNKLYATVYSGVPVWEDATPVLFCASDVNLTSTEQHNIWASQACVPTDPTPIEYRIVNVTDDFSIWDNYMVEQMHEDIISLWDQSLKPCVKLSFLCVQMNCTDVNSTKNANLTSITTEEIKTPLKKCEFNVTTVIKEKKEKKQALFYVADLMEVDKNZSMYTLINCNSSTIKQACPKVSFEPIPIHYCAPAGFALFKCIEKDFNGTGPCKNISVATCTHGIKPTVSTQLILNGTLSEGKIRIMGKNISDTGKNIIVTLNSTVNITCIREGSNDIEQMSIGPLSWIRMSEKDINYTRIAYCKYNDTDWVNALKQTAERYLELVGNTKTVSIIFNNSTGGDAEISNLHFNCNGEFFYCNTTKLFNHTFNCTKSSCSIDSTNRTQKNDNIIPCRLKQIVRSWIKGESGLYAPPIKGNLTCRSNITGMILQMDQPWNDTCKNATFRPVGGDMRDIWRTELYKYKVVRVKPFSVAPTKIARPVIGTHTHRKKRAVGLGMLFLGVLSAAGSTMGAASVTLTVRTQTLLKGIVQQQDNLLRAIQAQQHLLRLSVWGIRQLRARLLAIETFMQNQQLLNLWGCKGRLVCYTSVEWNSSWIGNDTIWDTLTWQQWDREVSNISSIIYAQIQEAQDQQEKNQRELLELDEWASIWQWLDITKWLWYIKIAIIIVGALIGVRVVMIILHLVQNIRQGYRPLSLQIPIQNQQEAEAPGRTGEEGGDGDRRKLTALPPGFLQLLYTDLRTI

Annotated regions:
phrase: VRTQTLLKGIVQQQDNLLRAIQAQQHLLRLSVWGIRQLRARLLAIETFMQNQQLLNLWGCKGRLVCYTSVEWNSSWIGNDTIWDTLTWQQWDREVSNISSIIYAQIQEAQDQQEKNQRELLEL
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LKKCEFNVTTVIKEKKEKKQALFYVADLMEVDKNZSMYTLINCNSSTIKQACPKVSFEPIPIHYCAPAGFALFKCIEKDFNGTGPCKNISVATCTHGIKPTVSTQLILNGTLSEGKIRIMGKNISDTGKNIIVTLNSTVNITCIREGSNDIEQMSIGPLSWIRMSEKDINYTRIAYCKYNDTDWVNALKQTAERYLELVGNTKTVSIIFNNSTGGDAEISNLHFNCNGEFFYCNTTKLFNHTFNCTKSSCSIDSTNRTQKNDNIIPCRLKQIVRSWIKGESGLYAPPIKGNLTCRSNITGMILQMDQPWNDTCKNATFRPVGGDMRDIWRTELYKYKVVRVKPFSVAPTKIA
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: LYATVYSGVPVWEDATPVLFCASDVNLTSTEQHNIWASQACVPTDPTPIEYRIVNVTDDFSIWDNYMVEQMHEDIISLWDQSLKPCVKLSFLCVQMNCTDVNSTKNANLT
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: MGAASVTLTVRTQTLLKGIVQQQDNLLRAIQAQQHLLRLSVWGIRQLRARLLAIETFMQNQQLLNLWGCKGRLVCYTSVEWNSSWIGNDTIWDTLTWQQWDREVSNISSIIYAQIQEAQDQQEKNQRELLELDEWASIWQWLDITKWLWYIKIAIIIVGALIGVRVVMIILHLVQNIRQGYRPLSLQIPI
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MGSKYAAGHYSCSSYFQSLDIPENRQFVQGMKKRYGQDTVISSVMANTYSGIQMILEAIVHLRSTDRKKILNYLYNKTFPSPSGNITIESNHHLSREVRIGQANLDGQFDIVWSSEQPIPAKPLMTNTIIDSANEEQIWKYVVESMGEETADGVLVLDQDQTILYANSAAYSFLRVKQGDILKEEQLREISHQLIKKETSKYGVQLFIFKRAKRGPLLVTKPDKEPYRFGRVVTYNPSFEKELRTASIASQSDANVLILGETGSGKEVLARTIHEQSPRRNGPFVALNAGAIPRELIASELFGYVEGAFTGARKGGRPGKFEVADGGTLFLDEIGDMPLELQVNLLRVLEERKVIRIGDHKERPINVRVIAATNRNLKEEIAYRGSFRSDLYYRLNVFTIHIPPLRDRKEDIETLSLQFLKNFHQHYCGKGTCHLSNSALQLLQSYNWPGNIRELRNVIERAFLLAIDEPEILPIHLPEEIQNANCAIPPSSVNNLKDVEKKMIEQALKESKSLTEAAKKLGITRSTLYRKIKQWKIHKTTFS

Annotated regions:
phrase: VVTYNPSFEKELRTASIASQSDANVLILGETGSGKEVLARTIHEQSPRRNGPFVALNAGAIPRELIASELFGYVEGAFTGARKGGRPGKFEVADGGTLFLDEIGDMPLELQVNLLRVLEERKVIRIGDHKERPINVRVIAATNRNLKEEIAYRGSFRSDLYYRLNVFTIHIPPLRDRKEDIETLSLQFLKNFHQHYCGKGTCHLSNSALQLLQSYNWPGNIRELRNVIERAF
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: GKFEVADGGTLFLDE
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_2
description: Sigma-54 interaction domain, ATP-binding site 2

phrase: WPGNIRELR
type: CONSERVED_SITE
name: Sigma_54_int_dom_CS
description: Sigma-54 interaction domain, conserved site

phrase: SDANVLILGETGSGKEVLARTIHEQSPRRNGPFVALNAGAIPRELIASELFGYVEGAFTGARKGGRPGKFEVADGGTLFLDEIGDMPLELQVNLLRVLEERKVIRIGDHKERPINVRVIAATNRNLKEEIAYRGSFRSDLYYRLNV
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: TYNPSFEKELRTASIASQSDANVLILGETGSGKEVLARTIHEQSPRRNGPFVALNAGAIPRELIASELFGYVEGAFTGARKGGRPGKFEVADGGTLFLDEIGDMPLELQVNLLRVLEERKVIRIGDHKERPINVRVIAATNRNLKEEIAYRGSFRSDLYYRLNVFTI
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: TADGVLVLDQDQTILYANSAAYSFLRVKQGDILKEEQL
type: DOMAIN
name: PAS
description: PAS domain

phrase: VLILGETGSGKEV
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_1
description: Sigma-54 interaction domain, ATP-binding site 1

phrase: LKDVEKKMIEQALKESKSLTEAAKKLGITRSTLYRKIKQ
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type
Protein sequence:
MTRLDSIERAVADIAAGKAVVVVDDEDRENEGDLIFAAEKATPELVAFMVRYTSGYLCVPLAGEDCDRLGLLPQYAVNQDKHGTAYTVTVDAKNGIGTGISASDRAATMRLLADAASTADDFTKPGHVVPLRAKDGGVLRRPGHTEASVDLAKLAGLRPAAVICEIVSQKDEGAMAQTEELRVFADEHNLALVSIADLIEWRRKHEKHVQRIAEARIPTQHGEFRAVGYTSIYDDVEHVALVLGDISGPDGDGNDVLVRVHSECLTGDVFGSRRCDCGPQLDAAMEMVAKEGRGIVLYMRGHEGRGIGLMHKLQAYQLQDAGEDTVDANLKLGLPADARDYGLGAQILVDLGVKSMRLLTNNPAKRVGLDGYGLHIIERVPLPVRANSENIRYLRTKRDRMGHDLADLDDHPEADGA

Annotated regions:
phrase: RIAEARIPTQHGEFRAVGYTSIYDDVEHVALVLGDISGPDGDGNDVLVRVHSECLTGDVFGSRRCDCGPQLDAAMEMVAKEGRGIVLYMRGHEGRGIGLMHKLQAYQLQDAGEDTVDANLKLGLPADARDYGLGAQILVDLGVKSMRLLTNNPAKRVGLDGYGLHIIERV
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MGVTELGKLIGREARREIKLENLAGRCIALDAYNALYQFLASIRQPDGTPLMDRQGRVTSHLSGLFYRTINLMEAGIKPVYVFDGKPPEFKLAEIEARRRVKEKAMEEVVKAIREGKRDDVAKYMKRVIFLTNEMVEDAKRLLTYMGVPWVQAPSEGEAQAAHMAKRGHCWAVGSQDYDSLLFGSPRLVRNLAVSPKRRSGEEVVEVSPEVVELDSVLKALKLKGREQLIDVAILLGTDYNPDGVPGVGPQKALKLVLEFGSLEKMLDTVLRGVSFPVDPLEIKRFFLNPPVTEEYALELKNVDERGLVNFLVGEHDFSEERVAKAVERLKKARARQKTSSLDSFFHGA

Annotated regions:
phrase: TYMGVPWVQAPSEGEAQAAHMAKRGHCWAVGSQDYDSLLFGSPRLVRNLAVSPKRRSGEEVVEVSPEVVELDSVLKALK
type: DOMAIN
name: XPG-I_dom
description: XPG-I domain

phrase: GVPWVQAPSEGEAQAAHMAKRGHCWAVGSQDYDSLLFGSPRLVRNLAVSPKRRSGEEVVEVSPEVVELDSVLKALKLKGREQLIDVAILLGT
type: DOMAIN
name: XPG-I_dom
description: XPG-I domain

phrase: IKPVYVFDGKPPEF
type: CONSERVED_SITE
name: XPG_CS
description: XPG conserved site

phrase: REQLIDVAILLGTDYNPDGVPGVGPQKALKLVLE
type: CONSERVED_SITE
name: HhH2
description: Helix-hairpin-helix motif, class 2

phrase: MGVTELGKLIGREARREIKLENLAGRCIALDAYNALYQFLASIRQPDGTPLMDRQGRVTSHLSGLFYRTINLMEAGIKPVYVFDGKPPEFKLAEIEARRRVKE
type: DOMAIN
name: XPG_DNA_repair_N
description: XPG, N-terminal

phrase: MGVTELGKLIGREARREIKLENLAGRCIALDAYNALYQFLASIRQPDGTPLMDRQGRVTSHLSGLFYRTINLMEAGIKPVYVFDGKPPEFKLAEIEARRRVKEK
type: DOMAIN
name: XPG_DNA_repair_N
description: XPG, N-terminal
Protein sequence:
MRKMGVVIINFKAYKEGFGKRALELAKIAENVASRCDEYVGIAVSFLDLPVIAREVSIDVYAQHVDAVGFGSHTGRINADMIAEYGAKGSLVNHSERRLKLADIEFNVSRLRELGLTSVVCTNNVPTTAAAAALNPDFVAVEPPELIGSGIPVSKAEPEVVENSVKAAKEVNKSVRVLCGAGITTHEDYVKALELGAEGVLLASGVVKAEDQKRALEELVGLL

Annotated regions:
phrase: AVEPPELIGS
type: ACTIVE_SITE
name: Triosephosphate_isomerase_AS
description: Triosephosphate isomerase, active site
Protein sequence:
MLTGKRILLIITGGIAAFKCHDLVRRLRQRGAFVRCVMTEAATRFVTPLSLQALSEDKVYADMFSLTDESEMGHIELSREADLLVVAPATADILAKMAAGLADDLASTVLLATDKAVLAAPAMNVRMWLHAATQANVVTLRSRGVLFVGPNEGPMACNEFGPGRMSEPLEIVAAIEAFFTGLLPAPDVHAALPLPPEAISLPHQPLLGRRALVTSGPTREAIDPVRYISNHSSGRQGHAIAAALARLGADVTLVSGPVSQLDPAGVRVVKVESADQMLSACQAALPVDVAICAAAVADWKLARLAGSKLKKSPGAPPPSLELVPNPDILATLSAAGNSRPRLVVGFAAETEEVVANAVAKRARKGCDWILANDVSPASGTFGGENNTIHLVTADGVEDWPTQSKDAVAARLAARIAQHLTAI

Annotated regions:
phrase: GRRALVTSGPTREAIDPVRYISNHSSGRQGHAIAAALARLGADVTLVSGPVSQLDPAGVRVVKVESADQMLSACQAALPVDVAICAAAVADWKLARLAGSKLKKSPGAPPPSLELVPNPDILATLSAAGNSRPRLVVGFAAETEEVVANAVAKRARKGCDWILANDVSPASGTFGGENNTIH
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal

phrase: KRILLIITGGIAAFKCHDLVRRLRQRGAFVRCVMTEAATRFVTPLSLQALSEDKVYADMFSLTDESEMGHIELSREADLLVVAPATADILAKMAAGLADDLASTVLLATDKAVLAAPAMNVRMWLHAATQANVVTLRSRGVLFVGPNEGPMACNEFGPGRMSEPLEIVAAI
type: DOMAIN
name: Flavoprotein
description: Flavoprotein
Protein sequence:
MENRWQVMIVWQVDRMRIKTWKSLVKHHMHXSKKAKGWFYRHHYESTHPKISSEVHIPLGDAKLVVXTYWGLHTGERDWHLGQGVSIEWRKGRYSTQVDPSQADQLIHLYYFDCFSDSAIXXXXLGHIVSPRCEYQAGHNKVGSLQYLALTALIKPKKRKPXLPSVEKLTEDRWNEPQKTKGHRGSHTMTGX

Annotated regions:
Protein sequence:
MPELPEVETVRRGLEPVLSGARLARVRANRPDLRFPLPDGFVQRLTGAKILRLDRRAKYLLVPLDRGDTLVMHLGMTGRFEIAAPSGTIRPGDFAREVTPDDKHAHVVFETEDGAVVTYYDPRRFGFMDLIATDKVDRHPWFAAMGPEPLGEGFDAKTLVAAFNGRKQGPKTLLLDQKTVAGLGNIYVCEALHRAHISPFKPAGMIAGKRLGPLTTAIKDVLAEAVEVGGSSLKDFAATDGALGYFQHRFRVYDREGQPCPTPGCKGMIGREVQAGRSTFFCPVCQV

Annotated regions:
phrase: RVYDREGQPCPTPGCKGMIGREVQAGRSTFFCPVCQ
type: DOMAIN
name: Znf_DNA_glyclase/AP_lyase
description: Zinc finger, DNA glycosylase/AP lyase-type

phrase: PELPEVETVRRGLEPVLSGARLARVRANRPDLRFPLPDGFVQRLTGAKILRLDRRAKYLLVPLDRGDTLVMHLGMTGRFEIAAPSGTIRPGDFAREVTPDDKHAHVVFETEDGAVVTYYDPRRF
type: DOMAIN
name: FPG_cat
description: Formamidopyrimidine-DNA glycosylase, catalytic domain

phrase: GQPCPTPGCKGMIGREVQAGRSTFFCPVC
type: DOMAIN
name: Znf_FPG/IleRS
description: Zinc finger, FPG/IleRS-type

phrase: MGPEPLGEGFDAKTLVAAFNGRKQGPKTLLLDQKTVAGLGNIYVCEALHRAHISPFKPAGMIAGKRLGPLTTAIKDVLAEAVEVGGSSLKDF
type: DOMAIN
name: DNA_glyclase/AP_lyase_DNA-bd
description: DNA glycosylase/AP lyase, H2TH DNA-binding

phrase: CPTPGCKGMIGREVQAGRSTFFCPVC
type: BINDING_SITE
name: DNA_glyclase_Znf_dom_DNA_BS
description: DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site

phrase: MGPEPLGEGFDAKTLVAAFNGRKQGPKTLLLDQKTVAGLGNIYVCEALHRAHISPFKPAGMIAGKRLGPLTTAIKDVLAEAVEVGGSSLK
type: DOMAIN
name: DNA_glyclase/AP_lyase_DNA-bd
description: DNA glycosylase/AP lyase, H2TH DNA-binding

phrase: MPELPEVETVRRGLEPVLSGARLARVRANRPDLRFPLPDGFVQRLTGAKILRLDRRAKYLLVPLDRGDTLVMHLGMTGRFEIAAPSGTIRPGDFAREVTPDDKHAHVVFETEDGAVVTYYDPRRFGF
type: DOMAIN
name: FPG_cat
description: Formamidopyrimidine-DNA glycosylase, catalytic domain

phrase: PELPEVETVRRGLEPVLSGARLARVRANRPDLRFPLPDGFVQRLTGAKILRLDRRAKYLLVPLDRGDTLVMHLGMTGRFEIAAPSGTIRPGDFAREVTPDDKHAHVVFETEDGAVVTYYDPRRFGFM
type: DOMAIN
name: FPG_cat
description: Formamidopyrimidine-DNA glycosylase, catalytic domain
Protein sequence:
MNSTFVQIPKLNINKQVKKKTDSITANTLLPKLMNDTSIQQPNQQQQQQQPQQPQQVTNGITILQNYQPQQPQPATTTTQQLNSANNTPTLVSTKKSVIGINEIPEHLLIRDIIYVFQGIDGTYIKYNKQSDSFKIDENTSNTLVNGEPAYISKPKRDLVYRLCEFGWLFKKVRLFITNNDFKKTGLTNQSFCSAINDELIELYRIIAILETQVYKKFDMVNYGGGGGGSGGSGSGSGLESPSSVSSGGTTTSTEIPFIDGDSLTLIRLFVWIQSPLKRLKVLGTCVDSITVDMKGGEILSKIDTLSKHGDQDIRILIHNIMFKICQPLFSMIRLWMFKGEINDPYQEFFIRQYESVQLEKTWKEKFAIVARLLPSFISLPLSKRILIIGKSINYMKQFCNNFKEDKNDRYYYYNQEDDDDDDEDHDDNDDDDENENQGEDDEIIERKLLIKESKIIKEKTKELNYINKEVLQEIIELVSRQSSERLLKIVLNRFKFMNHVKALKKYLLLGQGDFIQYLMDLIGEDLLKPTSQIQRHKLVGWMDTAIRNSNAQFEEQDIVNRLDIALLPERPGNIGWDIFSLDYHVDTPLNTILSPNDILRYKKIFHFMWGIKRVEYSLASIWRKIRSSTSLSILSPIGGDIHKSHLIMNEMVHFISNFQYYLMFEVLECSWKNLEKFIDQEATDLDQLIEAHHQYLQDICNKMFLSNSDSCYECFKKLLSIIIKFTLLQTKLINLSIAIQNEKNFNETHQAQVNKEFNSFRNHLNNLYQEYTTSFYKFQSEILKVKVNQDLNPISLQYMLDFNEYYEEKKDN

Annotated regions:
phrase: MNHVKALKKYLLLGQGDFIQYLMDLIGEDLLKPTSQIQRHKLVGWMDTAIRNSNAQFEEQDIVNRLDIALLPERPGNIGWDIFSLDYHVDTPLNTILSPNDILRYKKIFHFMWGIKRVEYSLASIWRKIRSSTSLSILSPIGGDIHKSHLIMNEMVHFISNFQYYLMFEVLECSWKNLEKFIDQEATDLDQLIEAHHQYLQDICNKMFLSNSDSCYECFKKLLSIIIKFTLLQTKLINLSIAIQNEKNFNETHQAQVNKEFNSFRNHLNNLYQEYTTSFYKFQSEILKVKVNQDLNPISLQYMLDFNEY
type: DOMAIN
name: GCP_C
description: Gamma tubulin complex component, C-terminal

phrase: IRDIIYVFQGIDGTYIKYNKQSDSFKIDENTSNTLVNGEPAYISKPKRDLVYRLCEFGWLFKKVRLFITNNDFKKTGLTNQSFCSAINDELIELYRIIAILETQVYKKFDMVNYGGGGGGSGGSGSGSGLESPSSVSSGGTTTSTEIPFIDGDSLTLIRLFVWIQSPLKRLKVLGTCVDSITVDMKGGEILSKIDTLSKHGDQDIRILIHNIMFKICQPLFSMIRLWMFKGEINDPYQEFFIRQYESVQLEKTWKEKFAIVARLLPSFISLPLSKRILIIGKSINYMKQFCNNFKEDKNDRYYYYNQEDDDDDDEDHDDNDDDDENENQGEDDEIIERKLLIKESKIIKEKTKELNYINKEVLQEIIELVSRQSSERLLKIVL
type: DOMAIN
name: GCP_N
description: Gamma tubulin complex component protein, N-terminal
Protein sequence:
MASSMAPAAAMAILLLALLMPATLCSRSGPPSSKHGHGGHAKRAPPPASPVVPVAPQAAALVRATCNSTAYYDVCVSALAADPSSTTADVRGLSAIAVSVAAANASGAAQAAAALANGTAPLAAAAAGDGTVQALLRACAGKYGDARDALAAAKESMGQQDYDLATVHVSAGAEYPQVCKALFRRQRPGAYPAELAAREEALNKLCSVALDIIALLTSSPASNNNNS

Annotated regions:
phrase: LVRATCNSTAYYDVCVSALAADPSSTTADVRGLSAIAVSVAAANASGAAQAAAALANGTAPLAAAAAGDGTVQALLRACAGKYGDARDALAAAKESMGQQDYDLATVHVSAGAEYPQVCKALFRRQRPGAYPAELAAREEALNKLCSVALD
type: DOMAIN
name: Pectinesterase_inhib_dom
description: Pectinesterase inhibitor domain

phrase: QAAALVRATCNSTAYYDVCVSALAADPSSTTADVRGLSAIAVSVAAANASGAAQAAAALANGTAPLAAAAAGDGTVQALLRACAGKYGDARDALAAAKESMGQQDYDLATVHVSAGAEYPQVCKALFRRQRPGAYPAELAAREEALNKLCSVALD
type: DOMAIN
name: Pectinesterase_inhib_dom
description: Pectinesterase inhibitor domain

phrase: APQAAALVRATCNSTAYYDVCVSALAADPSSTTADVRGLSAIAVSVAAANASGAAQAAAALANGTAPLAAAAAGDGTVQALLRACAGKYGDARDALAAAKESMGQQDYDLATVHVSAGAEYPQVCKALFRRQRPGAYPAELAAREEALNKLCSVALDIIAL
type: DOMAIN
name: Pectinesterase_inhib_dom
description: Pectinesterase inhibitor domain
Protein sequence:
MSDEQIDKLVSRLDGALNRLGNVKKDHPLESSSNSKPTHQPKSPAPYRQKIEKLSAEVVDSNPYSRLMALQRMGIVNEYERIREKTVAVVGVGGVGSVVAEMLTRCGIGKLILFDYDKVEIANMNRLFYQPNQAGLSKVEAARDTLIHVNPDVQIEVHNFNITTMDNFDTFVNRIRKGSLTDGKIDLVLSCVDNFEARMAVNMACNEENQIWMESGVSENAVSGHIQYIEPGKTACFACVPPLVVASGIDERTLKRDGVCAASLPTTMAVVAGFLVMNTLKYLLNFGEVSQYVGYNALSDFFPRDSIKPNPYCDDSHCLQRQKEYEEKVANQPVDLEVEVPEEETVVHEDNEWGIELVNESEPSAEQSSSLNAGTGLKFAYEPIKRDAQTELSPAQAATHDFMKSIKDKLVEEAQNKGK

Annotated regions:
phrase: VAVVGVGGVGSVVAEMLTRCGIGKLILF
type: CONSERVED_SITE
name: D-isomer_DH_CS1
description: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1

phrase: YSRLMALQRMGIVNEYERIREKTVAVVGVGGVGSVVAEMLTRCGIGKLILFDYDKVEIANMNRLFYQPNQAGLSKVEAARDTLIHVNPDVQIEVHNFNITTMDNFDTFVNRIRKGSLTDGKIDLVLSCVDNFEARMAVNMACNEENQIWMESGVSENAVSGHIQYIEPGKTACFACVPPLVVASGIDERTLKRDGVCAASLPTTMAVVAGFLVMNTLKYLLNFGEVSQYVGYNALSDFFPRDSIKPNPY
type: DOMAIN
name: ThiF_NAD_FAD-bd
description: THIF-type NAD/FAD binding fold
Protein sequence:
MGKIALQLKATLENVTNLRPVGEDFRWYLKMKCGNCGEISEKWQYIRLMDSVALKGGRGSASMVQKCKLCARENSIDILSSTIKAYNAEDNEKFKTIVEFECRGLEPVDFQPQAGFAADGVESGTVFSDINLQEKDWTDYDEKAQESVGIFEVTHQFVKC

Annotated regions:
Protein sequence:
MENRWQVMIVWQVDRIRINTWKSLVKYHMHISKKAKRWLYRHHFESRHPRISSEVHIPLEAARLVITTYWGLHTGERDWHLGQGVSIEWRQERYRTQVDPDLADQLIHIYYFNCFSESAIRNAILGHIVSPRCDYQAGHNKVESLQYLALAALIKPKRKKPPLPSVKKLTENKWNKPQETKGHKGSRTMNGH

Annotated regions:
Protein sequence:
MSRTARIERVTKETKVLVEIDLDGTGKADIETGVGFYDHMLHQIARHGGFDLTVHTVGDLHIDAHHTMEDAALALGAAVDRALGDRAGIRRYGAATVPMDEVLVRAAVDLSGRPYVVHDEPPLAPYIGPVYPTSMTRHIWESFGQSARITLHVDVLRAARPGGHPDAHHVVEAQFKAVSRALREATSLDPRFTGVVPSTKGTL

Annotated regions:
phrase: IDAHHTMEDAALA
type: CONSERVED_SITE
name: ImidazoleglycerP_deHydtase_CS
description: Imidazoleglycerol-phosphate dehydratase, conserved site
Protein sequence:
MNIVLMGLPGAGKGTQADKIVEKYAIPHISTGDMFRAAIKEGTELGLQAKSFMDQGALVPDEVTIGIVRERLAKPDCEKGFLLDGFPRTVPQAEALDSILADLGKAIEHTLNIQVEKDELIARLSGRRICKTCGASYHLIFNPPAEEGKCDKDGGELYTRADDNPDTVANRLEVNMKQAQPLLDFYQAKGVLTNIDGQQDINKVFADLDALLQSSRS

Annotated regions:
phrase: FLLDGFPRTVP
type: CONSERVED_SITE
name: Adenylat_kinase_CS
description: Adenylate kinase, conserved site

phrase: RRICKTCGASYHLIFNPPAEEGKCDKDGGELYTRA
type: DOMAIN
name: Adenylate_kinase_lid-dom
description: Adenylate kinase, active site lid domain
Protein sequence:
MIIRPVVRSLQGRAPLATLRSAQSVFQPLPQLRRNASVTTGPDAASKASTTPIARITTTTEAPKDQKKAKAAAAAAAEPEEQEVIMSRMPRSLEALYLQPLRREAEYGVPSCDLQLRSYSIRNLEFFCDFALRAAYYLGLPAFGPVPLPRMIERWTVPKSHFIFKKSQENFERVTLRRLIQIKDGHPETVQLWLAFLQKHAYYGIGMKANVWEFSKLGVSKAMDESKSEVEKLLETRWEHLSHVSDMKGVGNFEDFLAKERLRISGGR

Annotated regions:
phrase: LQLRSYSIRNLEFFCDFALRAAYYLGLPAFGPVPLPRMIERWTVPKSHFIFKKSQENFERVTLRRLIQIKDGHPETVQLWLAFLQKHAYYGIGMK
type: DOMAIN
name: Ribosomal_uS10_dom
description: Small ribosomal subunit protein uS10 domain

phrase: DLQLRSYSIRNLEFFCDFALRAAYYLGLPAFGPVPLPRMIERWTVPKSHFIFKKSQENFERVTLRRLIQIKDGHPETVQLWLAFLQKHAYYGIGMKA
type: DOMAIN
name: Ribosomal_uS10_dom
description: Small ribosomal subunit protein uS10 domain
Protein sequence:
MQKVTIQEAEHLLQEIISEEDDRFQILIKDERKGVQKLISKWYKQKELAQKEKEKFLEMSKYENALREKGLTYIAGIDEVGRGPLAGPVVTAAVILPEDFYIPGLNDSKKLSEAKRERFYGEIKAKAIAIGVXIVSPQVIDEINIYQATKQAMLDAIANLSCTPEYLLIDAMKLPTPIPQTSIIKGDAKSISISAASIIAKVTRDRMMKELGEKYPAYGFEQHMGYGTKQHLEAIEAHGVLEEHRKSFAPIKDMIQK

Annotated regions:
phrase: AGIDEVGRGPLAGPVVTAAVILPEDFYIPGLNDSKKLSEAKRERFYGEIKAKAIAIGVXIVSPQVIDEINIYQATKQAMLDAIANLSCTPEYLLIDAMKLPTPIPQTSIIKGDAKSISISAASIIAKVTRDRMMKELGEKYPAYGFEQHMGYGTKQHLEAIEAHGVLEEHRKSF
type: DOMAIN
name: RNase_HII/HIII_dom
description: Ribonuclease HII/HIII domain

phrase: TYIAGIDEVGRGPLAGPVVTAAVILPEDFYIPGLNDSKKLSEAKRERFYGEIKAKAIAIGVXIVSPQVIDEINIYQATKQAMLDAIANLSCTPEYLLIDAMKLPTPIPQTSIIKGDAKSISISAASIIAKVTRDRMMKELGEKYPAYGFEQHMGYGTKQHLEAIEAHGVLEEHRKSFAPIKDMIQ
type: DOMAIN
name: RNase_HII/HIII_dom
description: Ribonuclease HII/HIII domain
Protein sequence:
MARGVNKVILVGNVGGDPETRYMPNGNAVTNITLATSESWKDKQTGQQQERTEWHRVVFFGRLAEIAGEYLRKGSQVYVEGSLRTRKWQGQDGQDRYTTEIVVDINGNMQLLGGRPSGDDSQRAPREPMQRPQQAPQQQSRPAPQQQPAPQPAQDYDSFDDDIPF

Annotated regions:
Protein sequence:
MPAGSPENHVSAELLGILRDDLNVDVSRVTPDARLVDDVGLDSVAFAVGMVAIEERLGVTLTEEELLSCETVGDLQAAIAAEPRETRDE

Annotated regions:
phrase: NHVSAELLGILRDDLNVDVSRVTPDARLVDDVGLDSVAFAVGMVAIEERLGVTLTEEELLSCETVGDLQAAIAAE
type: DOMAIN
name: PP-bd_ACP
description: Phosphopantetheine binding ACP domain

phrase: ELLGILRDDLNVDVSRVTPDARLVDDVGLDSVAFAVGMVAIEERLGVTLTEEELLSCETVGDLQ
type: DOMAIN
name: PP-bd_ACP
description: Phosphopantetheine binding ACP domain
Protein sequence:
MPDRPDGDAPTTSLARPSAAVVLAAGEGTRMRSATPKVLHEIGGRSLLGHAVHAVAALEPEHLVVVVGHARERVAEAVAAMADELARPVSAAVQEQQNGTGDAVRSGLAGLPAGLVGTVLVTYGDVPLLDTATLTALHTEHAQSGAAVTVLTTVLADPSGYGRIVRDAAGAVTGIVEQRDATAEQQAITEVNSGVYAFDAAFLLAAIDRLTTDNAQGELYLTDLPAIAAADGAGVAALVSDDVWQARGVNDRAQLAEARAELNRRVVHRWMLDGVTVVDPATTWIDVQVRLEADVTVHPGTQLHGTTSVAGGAQVGPDTTLTDVEIGAGASVVRTHGSGARIGAGASVGPFAFLRPGANLGERGKIGTFVEVKNADIGAGSKVPHLTYVGDATIGEMSNIGASSVFVNYDGVTKRRTVVGSHVRTGSDTMFIAPVQVGDGAYTGAGTVLRDDVPPGALAVSAGSQRTIDGWVRRKRPGTPAAEAAERAEAAATQLDGAATAAPAKDDAGHPGRGGNRR

Annotated regions:
phrase: GVTVVDPATTWIDVQVRLEADVTVHPGTQLHGTTSVAGGAQVGPDTTLTDVEIGAGASVVRTHGSGARIGAGASVGPFAFLRPGANLGERGKIGTFVEVKNADIGAGSKVPHLTYVGDATIGEMSNIGASSVFVNYDGVTKRRTVVGSHVRTGSDTMFIAPVQVGDGAYTGAGTVLRDDVPPGALAVSAGS
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain

phrase: AVVLAAGEGTRMRSATPKVLHEIGGRSLLGHAVHAVAALEPEHLVVVVGHARERVAEAVAAMADELARPVSAAVQEQQNGTGDAVRSGLAGLPAGLVGTVLVTYGDVPLLDTATLTALHTEHAQSGAAVTVLTTVLADPSGYGRIVRDAAGAVTGIVEQRDATAEQQAITEVNSGVYAFDAAFLLAAIDRLTTDNAQGELYLTDLPAIAAADGAGVAALVSDDVW
type: DOMAIN
name: NTP_transferase_dom
description: Nucleotidyl transferase domain
Protein sequence:
MRLLDLIKGMPVSHIGGDANVEITGLTKDSRAVKNGTVFFATRKSETFIAEALKKGATVIVTGKDVKEAVPCLIVSDDVPSLLGKMASRFYGLPSTRLHVAGVTGTNGKTTTTYLIESILKADDRKAGVIGTISYRYGGLELKADNTTPGATEAHGLLKDMHESGVRFVAMEVSSHALDQKRVEGIEFDIGIFTNLTHDHLDYHGDLDNYKSAKALLFRRYLEESAKENRCAILNADDPVVRDMIPSQPVKSLFYSLKTPADGHLISSQEDIRGLKLELSVMGKAVSIHSPLVGLFNASNILASALYGHAVGVPLASIKRGVEGLGGVPGRLERVMNEDGPSIFVDYAHTPDALKKVLEMLNRLKEGRLILIFGCGGDRDRTKRSVMGGIASRMADMTIITSDNPRSEDPKSIIHEVAQGFQGNSFKIIENRRDAICEGVKLARENDVLLVAGKGHEDYQIIGDKVFHFSDREVIEECLNVVRG

Annotated regions:
phrase: VTGTNGKTTTTYLIESILKADDRKAGVIGTISYRYGGLELKADNTTPGATEAHGLLKDMHESGVRFVAMEVSSHALDQKRVEGIEFDIGIFTNLTHDHLDYHGDLDNYKSAKALLFRRYLEESAKENRCAILNADDPVVRDMIPSQPVKSLFYSLKTPADGHLISSQEDIRGLKLELSVMGKAVSIHSPLVGLFNASNILASA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRLERVMNEDGPSIFVDYAHTPDALKKVLEMLNRLKEGRLILIFGCGGDRDRTKRSVMGGIASRMADMTIITSDNPRSEDPKSIIHEVAQGFQGNSFKIIENRRDAICEGVKLARENDVLLVAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MNLYNTQCPVPKEQQPVHEYTSLKNSWFFCWPTLSRRSYNKKITIALLLNCLLVSPILLSIFPITKLPLKFFFSEFITSSLMTGFILIRLYLGWSYVVKRLMSATVFYEESGWYDGQIWVKPSEILLKDRFIGLYEVFPLLNKIKNTLSFLSLMISGPVLLFFYF

Annotated regions:
Protein sequence:
MINDDTIVAPATAPGEGGIGIVRLSGSGAEKLLLKFFSPRRFCERLDSHFLYYGKFTDETGKIVDEVMAVIMRKPRSYTREDVVEIHCHGGGLLVRSIIDVFLAAGARLARPGEFTLRAFLNGRIDLTQAEAVIDLIRSRSNLASDVALSQLEGRLAQQIGVFGQVIADLLAQVEAAIDFPEEDIELDDQQMLGASAGALIADMDRIIDTFESGRVLREGLRVLIFGKPNVGKSSLMNGLLGEARAIVTDIPGTTRDTIEEDLVLGGLPLRIVDTAGIRNTLDPVEEEGVRRARSKVESADLVLLVIDGSQEMGEDDLLALEFCRNREVLVVINKCDLATLPISSALDGLPYVRTSVLEKNGLDGLVSAIQERFVHNAHVAENRETVVLTQRRHRQALVKARQSLGRFRETLVQGMSPEFGAVELRDALDAVGEITGETTPDDILERIFTRFCIGK

Annotated regions:
phrase: DTIVAPATAPGEGGIGIVRLSGSGAEKLLLKFFSPRRFCERLDSHFLYYGKFTDETGKIVDEVMAVIMRKPRSYTREDVVEIHCHGGGLLVRSIIDVFLAAGARLARPGEFTLRAFLN
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal

phrase: RVLIFGKPNVGKSSLMNGLLGEARAIVTDIPGTTRDTIEEDLVLGGLPLRIVDTAGIRNTLDPVEEEGVRRARSKVESADLVLLVIDGSQEMGEDDLLALEFCRNREVLVVINKCDLATLPISSALDGLPYVRTSVLEKNGLD
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: GLRVLIFGKPNVGKSSLMNGLLGEARAIVTDIPGTTRDTIEEDLVLGGLPLRIVDTAGIRNTLDPVEEEGVRRARSKVESADLVLLVIDGSQEMGEDDLLALEFCRNREVLVVINKCDLATLPISSALDGLPYVRTSVLEKNGLDGLVSAIQERF
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain

phrase: RVLIFGKPNVGKSSLMNGLLGEARAIVTDIPGTTRDTIEEDLVLGGLPLRIVDTAGIRNTLDPVEEEGVRRARSKVESADLVLLVIDGSQEMGEDDLLALEFCRNREVLVVIN
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: TIVAPATAPGEGGIGIVRLSGSGAEKLLLKFFSPRRFCERLDSHFLYYGKFTDETGKIVDEVMAVIMRKPRSYTREDVVEIHCHGGGLLVRSIIDVFLAAGARLARPGEFTLRAFLNG
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal

phrase: LTQAEAVIDLIRSRSNLASDVALSQLEGRLAQQIGVFGQVIADLLAQVEAAIDFPEEDIELDDQQMLGASAGALIADMDRIIDTFESGRVLREGLRVLIFGKPNVGKSSLMNGLLGEARAIVTDIPGTTRDTIEEDLVLGGLPLRIVDTAGIRNTLDPVEEEGVRRARSKVESADLVLLVIDGSQEMGEDDLLALEFCRNREVLVVINKCDLATLPISSALDGLPYVRTSVLEKNGLDGLVSAIQERFVHNAHVAENRETVVLTQRRHRQALVKARQSLGRFRETLVQGMSPEFGAVELRDALDAVGEITGETTPDDILERIFTRF
type: DOMAIN
name: MnmE_helical
description: MnmE, helical domain

phrase: REGLRVLIFGKPNVGKSSLMNGLLGEARAIVTDIPGTTRDTIEEDLVLGGLPLRIVDTAGIRNTLDPVEEEGVRRARSKVESADLVLLVIDGSQEMGEDDLLALEFCRNREVLVVINKCDLATLPISSALDGLPYVRTSVLEKNGLDGLVSAIQER
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain
Protein sequence:
MEANHQRNDLGLVALTMLAQYHNISLNPEEIKHKFDLDGKGLSLTSWLLAAKSLALKAKHIKKEISRLHLVNLPALVWQDNGKHFLLVKVDTDNNRYLTYNLEQDAPQILSQDEFEACYQGQLILVTSRASVVGQLAKFDFTWFIPAVIKYRKIFLETLIVSIFLQIFALITPLFFQVVMDKVLVHRGFSTLNIITVALAIVIIFEIVLSGLRTYVFSHSTSRIDVELGAKLFRHLLSLPISYFENRRVGDTVARVRELDQIRNFLTGQALTSVLDLLFSFIFFAVMWYYSPKLTLVILGSLPCYILWSIFISPILRRRLDDKFARSADNQAFLVESVTAINMIKAMAVAPQMTDTWDKQLASYVSSSFRVTVLATIGQQGVQLIQKTVMVINLWLGAHLVISGDLSIGQLIAFNMLSGQVIAPVIRLAQLWQDFQQVGISVTRLGDVLNSPTEQYQGKLSLPEIKGDISFKNIRFRYKPDAPTILNNVNLEIRQGEVIGIVGRSGSGKSTLTKLLQRFYIPENGQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRENIALSDPGMPMERVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYQSEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEIVEQGKHHELLQNSNGLYSYLHQLQLN

Annotated regions:
phrase: ANHQRNDLGLVALTMLAQYHNISLNPEEIKHKFDLDGKGLSLTSWLLAAKSLALKAKHIKKEISRLHLVNLPALVWQDNGKHFLLVKVDTDNNRYLTYNLEQDAPQILSQDEFEACYQGQLILVTSR
type: DOMAIN
name: Peptidase_C39
description: Peptidase C39, bacteriocin processing

phrase: LIVSIFLQIFALITPLFFQVVMDKVLVHRGFSTLNIITVALAIVIIFEIVLSGLRTYVFSHSTSRIDVELGAKLFRHLLSLPISYFENRRVGDTVARVRELDQIRNFLTGQALTSVLDLLFSFIFFAVMWYYSPKLTLVILGSLPCYILWSIFISPILRRRLDDKFARSADNQAFLVESVTAINMIKAMAVAPQMTDTWDKQLASYVSSSFRVTVLATIGQQGVQLIQKTVMVINLWLGAHLVISGDLSIGQLIAFNMLSGQVIAPVIRLAQLWQDFQ
type: DOMAIN
name: ABC1_TM_dom
description: ABC transporter type 1, transmembrane domain

phrase: QGEVIGIVGRSGSGKSTLTKLLQRFYIPENGQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRENIALSDPGMPMERVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYQSEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: DLGLVALTMLAQYHNISLNPEEIKHKFDLDGKGLSLTSWLLAAKSLALKAKHIKKEISRLHLVNLPALVWQDNGKHFLLVKVDTDNNRYLTYNLEQDAPQILSQDEFEACYQGQLIL
type: DOMAIN
name: Peptidase_C39-like_A
description: Peptidase C39-like A

phrase: ISFKNIRFRYKPDAPTILNNVNLEIRQGEVIGIVGRSGSGKSTLTKLLQRFYIPENGQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRENIALSDPGMPMERVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYQSEHIIMQNMQKICQGRTVILIAHRLSTVKNADRIIVMEKGEIVEQGKHHELLQNSNGLYSYLH
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: EANHQRNDLGLVALTMLAQYHNISLNPEEIKHKFDLDGKGLSLTSWLLAAKSLALKAKHIKKEISRLHLVNLPALVWQDNGKHFLLVKVDTDNNRYLTYNLEQDAPQILSQDEFEACYQGQLIL
type: DOMAIN
name: Peptidase_C39
description: Peptidase C39, bacteriocin processing

phrase: TLIVSIFLQIFALITPLFFQVVMDKVLVHRGFSTLNIITVALAIVIIFEIVLSGLRTYVFSHSTSRIDVELGAKLFRHLLSLPISYFENRRVGDTVARVRELDQIRNFLTGQALTSVLDLLFSFIFFAVMWYYSPKLTLVILGSLPCYILWSIFISPILRRRLDDKFARSADNQAFLVESVTAINMIKAMAVAPQMTDTWDKQLASYVSSSFRVTVLATIGQQGVQLIQKTVMVINLWLGAHLVISGDLSIGQLIAFNMLSGQVIAP
type: DOMAIN
name: ABC1_TM_dom
description: ABC transporter type 1, transmembrane domain

phrase: LNNVNLEIRQGEVIGIVGRSGSGKSTLTKLLQRFYIPENGQVLIDGHDLALADPNWLRRQIGVVLQDNVLLNRSIRENIALSDPGMPMERVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEAT
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: LSGGQRQRIAIARA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site