nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSRKPSLAVVGATGAVGTVMLDILSKRPNVWGEIRLIASARSAGKKLTCRGEELTVVALSPEAFDGIDVAMFDVPDEVSKEWAPIAASRGAVAVDNSGAFRMDPEVPLVVPEVNPEQVKNRPKGIISNPNCTTLSMIVVMGELNKKYKLEELVVASYQAASGAGQSGLDVLREEISAVANKTVGDVAGDIRSLVKKNNTFPAPLALNVIPWAGSLKEDGHSSEELKVRNESRKILGLSSLRVSATCVRVPVLTTHSLAVHAVFANEVSRKEAQDLLENTAGVKLVDDPETHQFPTPADVVGTDPTWVGRIRRSIDNPKALDLFVCGDNLRKGAALNAAQIAELVAAEFN

Annotated regions:
phrase: LNKKYKLEELVVASYQAASGAGQSGLDVLREEISAVANKTVGDVAGDIRSLVKKNNTFPAPLALNVIPWAGSLKEDGHSSEELKVRNESRKILGLSSLRVSATCVRVPVLTTHSLAVHAVFANEVSRKEAQDLLENTAGVKLVDDPETHQFPTPADVVGTDPTWVGRIRRSIDNPKALDLFVCGDNLR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: SLAVVGATGAVGTVMLDILSKRPNVWGEIRLIASARSAGKKLTCRGEELTVVALSPEAFDGIDVAMFDVPDEVSKEWAPIAASRGAVAVDNSGAFRMDPEVPLVVPEVNPEQVKN
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: LAVVGATGAVGTVMLDILSKRPNVWGEIRLIASARSAGKKLTCRGEELTVVALSPEAFDGIDVAMFDVPDEVSKEWAPIAASRGAVAVDNSGAFRMDPEVPLVVPEVNPEQVK
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MALKYPGGKEYRGNRLNAARQPMAADYANRGMTLEEDLNATNEYYRERGIAVVYKKPTPVQIVRVDYPKRSAAVIKEAYFRQASTTDYNGVYRGKYIDFEAKETKNKTAFPLKNFHAHQIRHMEQVMAHGGICFAILRFSVLNETYLLDAFHLIARWNEQEAGGRKSIPKREIEQYGHYIPLGYQPRIDYISVVEKVYFTV

Annotated regions:
Protein sequence:
MLMKLSDLLAGYEHRVLQGDPGAADIRACIAYDSRRMTAGSMYIAMRGSRTDGHRFVGDAVVRGAVAVMVDHEIEDSMPSQVCVVQVADTRAAAPVVASRYFGEPSREMDVVAVTGTNGKTSVSYMMESALRTAVRARVGVIGTDGCRVAHESIRIDTTTPTTPEAVELHHILRCMRDRGADTVVMEASSMALMLRRVDHTDIKVGVFTNLTPDHLDNHGSMEQYKQAKLLLFRMCHQAVANADDPVSADIAALMPRAVTTFGLDDAEADFRAGDLVVEPTGTRFVLHHDGRRYQAEVPIPGRFAVYNALATVATCHLLGHDLDAVIGALAALPPIPGRFEHFRTPKGVSVVVDYAHSPDSLEKVLSTIRGFARRRVITVFGCGGDRDRTKRAPMGEIAQKHSDFVVVTSDNPRNEDPEAIIDQIMLGMHATSAQVQRITDRRAAIERGLAVADPGDIVLVAGKGAEKYQIIGDQTVHFDDMETVRQLAAKPAN

Annotated regions:
phrase: GRFEHFRTPKGVSVVVDYAHSPDSLEKVLSTIRGFARRRVITVFGCGGDRDRTKRAPMGEIAQKHSDFVVVTSDNPRNEDPEAIIDQIMLGMHATSAQVQRITDRRAAIERGLAVADPGDIVLVAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: IAYDSRRMTAGSMYIAMRGSRTDGHRFVGDAVVRGAVAVMVDHE
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: VTGTNGKTSVSYMMESALRTAVRARVGVIGTDGCRVAHESIRIDTTTPTTPEAVELHHILRCMRDRGADTVVMEASSMALMLRRVDHTDIKVGVFTNLTPDHLDNHGSMEQYKQAKLLLFRMCHQAVANADDPVSADIAALMPRAVTTFGLDDAEADFRAGDLVVEPTGTRFVLHHDGRRYQAEVPIPGRFAVYNALATVA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central
Protein sequence:
MDLQYFILAFSSIFSILNPFGAVPVFITLTESYPKKERDLVAKKTVIYALAILLAFALFGEWILKFFGISLDAFKIAGGILLLLISLDMVRGQQEAKIHRKEIEAAYEIDEIALMPLATPLLAGPGSITACMVAMAEASDIGDKFLVILAILLSLGITYLTLLSAESVLDRIGRLGIRILTRMMGLILTAIAVQMIVNGIRGALL

Annotated regions:
Protein sequence:
MATELSDAEKRKLLRERRQQKFSNGGASSRLNKITGQQQNSFLSSTSVLDEPKVTPSGNKKSSNVSDEEVEKSTKEIQDLLSSIPGNKDNSETDAAETNPEVALFQQLLKMQQQGGGFQNGSPDASTPDLFSSLLNNDTNTTASATQMLPNFVDEKVLKYYKFKVSKLKSYIILIKWALLAPYVYFIMHPNPTVLQASNLLSQIVERSNFFSIFTGLEIVFISIYYQMLKKLQRDNNVTATQNAGGILKYLTMIPEGILPIRNIQGKIGLALEYFDVASMYVTDICFVLVLFGVMKYYHSSFPISVPIEPPIAGIQ

Annotated regions:
Protein sequence:
MKNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRMVLAILAFLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRXXXXXXXXXXXGADTSVGIVGLLLTTAMAAEVTRRGSAYYMYLDRNDAGEAISFPTTLGMNKCYIQIMDLGHMCDATMSYECPMLDEGVEPDDVDCWCNTTSTWVVYGTCHHKKGEARRSRRAVTLPSHSXXXXXXXXXXXXXSREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQKVIYLVMILLIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQDKPTVDIELVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEAYLDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHETDENRAKVEITPNSPRAEATLGGFGSLGLDCEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVGEKKITXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAWDFGSVGGALNSLGKGIHQIFGAAFKSLFGGMSWFSXXXXXXXXXXXXXX

Annotated regions:
phrase: XTAWDFGSVGGALNSLGKGIHQIFGAAFKSLFGGMSWF
type: DOMAIN
name: Flavi_E_Stem/Anchor_dom
description: Flavivirus envelope glycoprotein E, Stem/Anchor domain

phrase: VTLPSHSXXXXXXXXXXXXXSREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQKVIYLVMILLI
type: DOMAIN
name: Env_glycoprot_M_flavivir
description: Envelope glycoprotein M, flavivirus

phrase: XAQDKPTVDIELVTTTVSNMAEVRSYCYEASISDMASDSRCPTQGEAYL
type: DOMAIN
name: Flavi_Glycoprot_E_cen/dimer
description: Envelope glycoprotein E, central and dimerisation domain, flavivirus

phrase: LTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVGEKKI
type: DOMAIN
name: Flavi_E_Ig-like
description: Glycoprotein E, immunoglobulin-like domain, flavivirus

phrase: XTAWDFGSVGGALNSLGKGIHQIFGAAFKSLFGGMSWF
type: DOMAIN
name: Flavi_E_Stem/Anchor_dom
description: Flavivirus envelope glycoprotein E, Stem/Anchor domain

phrase: SAYYMYLDRNDAGEAISFPTTLGMNKCYIQIMDLGHMCDATMSYECPMLDEGVEPDDVDCWCNTTSTWVVYGTCHHKKGEARRS
type: DOMAIN
name: Flavi_propep
description: Flavivirus polyprotein propeptide

phrase: IRMVLAILAFLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRXXXXXXXXXXXGADTSVGIVGLLL
type: DOMAIN
name: Flavi_capsidC
description: Capsid protein C, flavivirus
Protein sequence:
MASNLQSQPKWTSKLVRDTFLQYFQGKGHTFVASSPVAPLSDPTLLFTNAGMNQFKSIFLGTVNPNSDFAQLKSAVNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIQYSWELLTQVYGLDPGRLYVTYFEGNKEGGLQPDLEAKALWKAVGVPEDHILPGNMKDNFWEMGDQGPCGPCSEIHYDRIGGRNAASLVNQDDPNVLEIWNNVFIQYNRENDGSLRSLPNKHVDTGMGFERLVSVLQDKSSNYDTDVFGPIFQTIQVITGAREYQGRFGTDDSDGIDTAYRVVADHVRTLMFAISDGVVPNNEGRGYVIRRVLRRGARYARKYFNVEIGSFFSKIVPTVVEQLGDMFPELKQKQQDVIEILNEEEISFAKTLDRGERQFEQYAQQAKTAGDHKLHGADVWRLYDTFGFPVDLTRIMAEERGLEIDDRQFEEARHKAKEASKGQKKTTTGSVKLDVHDLGKLEKMNGVPKTDDSAKFEIGNVTAQIKAIYHGKTFHSSTQNLDDSEQIGIILDRTNFYAEQGGQENDTGRIVIDGQAELEVVDVQQYAGYVLHTGYMKYGSFKVDDTVICEYDELRRWPIRNNHTGTHILNFALRGVLGDGIEQKGSLVSAEKLRFDFSHKSPVTDVELVKIEDLSTQYIRRNCLVYSKEVPLSIARNIAGVRAVFGETYPDPVRVVSVGAELDEILKNVEDPRWADFSIEFCGGTHVQKTGDIKDLVILEESGIAKGIRRIIAVTGEDAHEVQRLAEEFEKRLNHLEAMPSGSAKEQNAKQIQVELNQLSISAVQKSRFRERFTQINKKIIDEQKAQQKLESKKAVESITSYFAAPENANKSWLIAKLPISANAKAVSECLTYVKTKLADKMVYVLASSLEDGRVAHGCYVPKAISDQGASASEWSSAVSRAVGGKAGGKGPTSIGNGINPEKVDDAVDLASEYLSKFKL

Annotated regions:
phrase: VRVVSVGAELDEILKNVEDPRWADFSIEFCGGTHVQKTGDIKDLVILEESGIAKGIRRI
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD

phrase: VRDTFLQYFQGKGHTFVASSPVAPLSDPTLLFTNAGMNQFKSIFLGTVNPNSDFAQLKSAVNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIQYSWELLTQVYGLDPGRLYVTYFEGNKEGGLQPDLEAKALWKAVGVPEDHILPGNMKDNFWEMGDQGPCGPCSEIHYDRIGGRNAASLVNQDDPNVLEIWNNVFIQYNRENDGSLRSLPNKHVDTGMGFERLVSVLQDKSSNYDTDVFGPIFQTIQVITGAREYQGRFGTDDSDGIDTAYRVVADHVRTLMFAISDGVVPNNEGRGYVIRRVLRRGARYARKYFNVEIGSFFSKIVPTVVEQLGDMFPELKQKQQDVIEILNEEEISFAKTLDRGERQFEQYAQQAKTAGDHKLHGADVWRLYDTFGFPVDLTRIMAEERGLEIDDRQFEEARHKAKEASKGQKKTTTGSVKLDVHDLGKLEKMNGVPKTDDSAKFEIGNVTAQIKAIYHGKTFHSSTQNLDDSEQIGIILDRTNFYAEQGGQENDTGRIVIDGQAELEVVDVQQYAGYVLHTGYMKYGSFKVDDTVICEYD
type: DOMAIN
name: Ala-tRNA-synth_IIc_N
description: Alanyl-tRNA synthetase, class IIc, N-terminal

phrase: WTSKLVRDTFLQYFQGKGHTFVASSPVAPLSDPTLLFTNAGMNQFKSIFLGTVNPNSDFAQLKSAVNSQKCIRAGGKHNDLDDVGKDSYHHTFFEMLGNWSFGDYFKKEAIQYSWELLTQVYGLDPGRLYVTYFEGNKEGGLQPDLEAKALWKAVGVPEDHILPGNMKDNFWEMGDQGPCGPCSEIHYDRIGGRNAASLVNQDDPNVLEIWNNVFIQYNRENDGSLRSLPNKHVDTGMGFERLVSVLQDKSSNYDTDVFGPIFQTIQVITGAREYQGRFGTDDSDGIDTAYRVVADHVRTLMFAISDGVVPNNEGRGYVIRRVLRRGARYARKYFNVEIGSFFSKIVPTVVEQLGDMFPELKQKQQDVIEILNEEEISFAKTLDRGERQFEQYAQQAKTAGDHKLHGADVWRLYDTFGFPVDLTRIMAEERGLEIDDRQFEEARHKAKEASKGQKKTTTGSVKLDVHDLGKLEKMNGVPKTDDSAKFEIGNVTAQIKAIYHGKTFHSSTQNLDDSEQIGIILDRTNFYAEQGGQENDTGRIVIDGQAELEVVDVQQYAGYVLHTGYMKYGSFKVDDTVICEYDELRRWPIRNNHTGTHILNFALRGVLGDGIEQKGSLVSAEKLRFDFSHKSPVTDVELVKIEDLSTQYIRRNCLVYSKEVPLSIARNIAGVRAVFGETYPDPVRVVSVGAELDEILKNVEDPRWADFSIEFCGGTHVQKTGDIKDLVILEESGIAKGIRRIIAVTGEDAHEVQR
type: DOMAIN
name: Ala-tRNA-synth_IIc_core
description: Alanyl-tRNA synthetase, class IIc, core domain

phrase: VRVVSVGAELDEILKNVEDPRWADFSIEFCGGTHVQKTGDIKDLVILEESGIAKGIRR
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD

phrase: NKSWLIAKLPISANAKAVSECLTYVKTKLADKMVYVLASSLEDGRVAHGCYVPKAISDQGASASEWSSAVSRAVGGKAGGKGPTSIGNGINPEKVDDAVDLASEYL
type: DOMAIN
name: DHHA1_dom
description: DHHA1 domain
Protein sequence:
MSSSANSSPATTKFKFTDNLWDGFDLLVKRTDNDLIQSKNILNFFKKKAELEEQHSKKLEKLSLKTMMTIDESTSINAISYNSSWKKIINSSMMESEQHTLLNTSILNKVIQPLQAMIKDMETKRKKILQEGIKLKQDMKEMVDELKKSQFKYDKAGKDLESSRMELREYREQLDHQQQQQPSDSDLNNISKIERRIQRCEQDFSNCDEEYREQIKATNDFQHLYNTEKLPKILNDFEHFVISHSHFSKSYFTNLVSVLIELPSAYQQNYEFVKKSVEMIDITNDVQEFIRKNLMKKQLAQPFQYEPYIEGKLTKKTISLTWNNKILSQFSRSSNNNTATANNTSSGNLNPYLNGGIGGTKKDEPILPTASFKVSLDELMNRQKDNHPTLEVPYVLQVLSTRIAQMKGHVTEGIFRVPGIISTIKETRLRIDKADFNLSNIDDVRTPAALLKQWLRDIPTALIPDSLYQQCIDTPTNAIAIVKTIPIINQRVLCYLINFLQIFTKFEFVAHSKMGTSNLAMVFAPCILRCTSTDANVMLNNVPNERLFVETLIKQIPPPLNTNEFLNLPISMSDAINDSEDIEELNDLDQLSNDDNNNSNTNTSNISIGSGSNSNIVVNYSNNSPNIESSTLPSQSVVTTIETLPPLNDDHNSGSGNESNSSSSNSTTTPTGSPTTASKPRGPRTQTLGWVRIKPAPKPSAEPTITLSSSIAAGTTTTTTTATGITTTTTTTAGPEKTIISPVIIKPAAATPTTTTPTTTPTTTTSPTTATIPAVSTSTIKTSSPDRTTPLTSSPPLASTKSTDELMKKLDQFTQETTPSIRIATTTTPTTITTPTTTATTTTITTDKTTPVTSSPPTASNISSEDLMKKLDQFINF

Annotated regions:
phrase: GFDLLVKRTDNDLIQSKNILNFFKKKAELEEQHSKKLEKLSLKTMMTIDESTSINAISYNSSWKKIINSSMMESEQH
type: DOMAIN
name: FCH_dom
description: FCH domain

phrase: TKFKFTDNLWDGFDLLVKRTDNDLIQSKNILNFFKKKAELEEQHSKKLEKLSLKTMMTIDESTSINAISYNSSWKKIINSSMMESEQHTLLNTS
type: DOMAIN
name: FCH_dom
description: FCH domain

phrase: LEVPYVLQVLSTRIAQMKGHVTEGIFRVPGIISTIKETRLRIDKADFNLSNIDDVRTPAALLKQWLRDIPTALIPDSLYQQCIDTPTNAIAIVKTIPIINQRVLCYLINFLQIFTKFEFVAHSKMGTSNLAMVFAPCILRCTSTDANVMLNNVPNERLFVETLIKQI
type: DOMAIN
name: RhoGAP_dom
description: Rho GTPase-activating protein domain

phrase: PYVLQVLSTRIAQMKGHVTEGIFRVPGIISTIKETRLRIDKADFNLSNIDDVRTPAALLKQWLRDIPTALIPDSLYQQCIDTPTNAIAIVKTIPIINQRVLCYLINFLQIFTKFEFVAHSKMGTSNLAMVFAPCILRC
type: DOMAIN
name: RhoGAP_dom
description: Rho GTPase-activating protein domain

phrase: FKFTDNLWDGFDLLVKRTDNDLIQSKNILNFFKKKAELEEQHSKKLEKLSLKTMMTIDESTSINAISYNSSWKKIINSSMMESEQHTLLNTSILNKVIQPLQAMIKDMETKRKKILQEGIKLKQDMKEMVDELKKSQFKYDKAGKDLESSRMELREYREQLDHQQQQQPSDSDLNNISKIERRIQRCEQDFSNCDEEYREQIKATNDFQHLYNTEKLPKILNDFEHFVISHSHFSKSYFTNLVSVLIELPSAYQQNYEFVKKSVEMIDITN
type: DOMAIN
name: F_BAR
description: F-BAR domain

phrase: VSLDELMNRQKDNHPTLEVPYVLQVLSTRIAQMKGHVTEGIFRVPGIISTIKETRLRIDKADFNLSNIDDVRTPAALLKQWLRDIPTALIPDSLYQQCIDTPTNAIAIVKTIPIINQRVLCYLINFLQIFTKFEFVAHSKMGTSNLAMVFAPCILRCTSTDANVMLNNVPNERLFVETLIKQIPPP
type: DOMAIN
name: RhoGAP_dom
description: Rho GTPase-activating protein domain
Protein sequence:
MLYKRNPQLNKNGELIHLLSIEGLPKDIVTHILDTATNFVSVQEREVKKVPLLRGKSVFNLFFENSTRTRTTFEIAAKRLSADVFNLDIARSSTAKGETLLDTIDNLSAMAADIFVVRHSESGAPYLIAQHVAPHVHVVNAGDGRHSHPTQGLLDMYTIRHYKKDFSNLTVAIVGDVLHSRVARSDIHALTTLGAAEVRVVGPRTLVPSDMAQMGVRVFHNLEEGIKGCDVVITLRLQNERMSGALLPSSQEYFKSFGLTPEKLRLAKPDAIVMHPGPINRGVEIDSAVVDGPQAVILPQVTFGIAVRMAVMSIVAGNEA

Annotated regions:
phrase: HLLSIEGLPKDIVTHILDTATNFVSVQEREVKKVPLLRGKSVFNLFFENSTRTRTTFEIAAKRLSADVFNLDIARSSTAKGETLLDTIDNLSAMAADIFVVRHSESGAPYLIAQHVAPHVHVVNAGDGRHSHPTQGLLDMYTI
type: DOMAIN
name: Asp/Orn_carbamoyltranf_P-bd
description: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding

phrase: NLTVAIVGDVLHSRVARSDIHALTTLGAAEVRVVGPRTLVPSDMAQMGVRVFHNLEEGIKGCDVVITLRLQNERMSGALLPSSQEYFKSFGLTPEKLRLAKPDAIVMHPGPINRGVEIDSAVVDGPQAVILPQVTFGIAVRMAVMS
type: DOMAIN
name: Asp_carbamoyltransf_Asp/Orn-bd
description: Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain
Protein sequence:
MKLSNLAALLSASTVAPVAAGYVSQDIIRADTMNVAVAAAANAQDEDLLEKIISSSPLLSLHRTICQVESVSNHESAVGEALIKYLGENGFATEKQMVPVDEDDDSTDKRFNIWAYPEGSPKPKIILTSHIDTVPPHIDYNLQAPEGDFDRANITIKGRGTVDAKASVAAMIIAALGHLKEHPDVPLGLLFVVSEEKGGTGMVHFSDSDLNTTPPFFHTLIFGEPTELKLVDGHKGNLRFDVEARGVSAHSGYPWLGHSAISEILPVLERIDKLGDIPVKDGGLPASEKYGRTTLNIGMLKGGAAGNVVPESASASVAVRLAAGTIEDAQNIIRKAVADACGGSKNITITFPDSKAYPPVDLDTDVDGFELLTVNYGTDIPKLDIHDEDSDVKVKRYLYGPGTILVAHGADEALTVGDLEKAVKGYAKLIDAAVRRG

Annotated regions:
phrase: GHKGNLRFDVEARGVSAHSGYPWLGHSAISEILPVLERIDKLGDIPVKDGGLPASEKYGRTTLNIGMLKGGAAGNVVPESASASVAVRLAAGTIEDAQNIIRKAVA
type: DOMAIN
name: Peptidase_M20_dimer
description: Peptidase M20, dimerisation domain
Protein sequence:
MLKARVIPCLDVKDGRVVKGVNFVDLVDAGDPVEQARLYDAAGADELTFLDITASSDNRETIYDVVRRTAEQVFMPLTVGGGVRTVEDIRRLLLAGADKVSINTAAVHRPDFVREGAEKFGSQCIVVAIDAKAVAPGPDGAPRWEVFTHGGRTPTGLDAVDWARRMAELGAGEILLTSMDRDGTKAGFDIGLTRAVADAVPVPVIASGGVGTLDHLVAGIRDGHATAVLAASIFHFGTFSVGQAKRHMAAAGIPMRLA

Annotated regions:
Protein sequence:
MIGDAQTVTGYLERVQVAKTMADEGRWSESGDLLRQLINDIRSCKVSGNSKDEIDSKNAFLKSLEANLKLVQQNARDEDDLHDAMTRQSGSPEPPADPDVWSKPSAPSSSKFGAKKGTAATRQTKEPTKATAVMNNQVSNPADSKPANTSQGILPPNNAGETFDATSYDTYIVQAVRGTMATQTENTMSLDDIIGMQDVKQVLHEAVTLPLLVPEFFQGLRSPWKAMVLAGPPGTGKTLIARAIASESSSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFIDEIDTLGGQRGNSGEHEASRRVKSEFLVQMDGAQHKFDERRVFVLAATNIPWELDEALRRRFEKRIFIPLPDLDARKKLLQTSMKGTPHSNEINYDDLAAKTEGFSGADVVSLCRTAAINVLRRYDTKSLRGGELTAAMESLKTELVRNCDFEAALQAVSSSVDPDTMLKCKEWCDSFGAM

Annotated regions:
phrase: MVLAGPPGTGKTLIARAIASESSSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFIDEIDTLGGQRGNSGEHEASRRVKSEFLVQMDGAQHKFDERRVFVLAATNIPWELDEALRRRFEKRIFIP
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: INYDDLAAKTEGFSGADVVSLCRTAAINVLRRY
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: PWKAMVLAGPPGTGKTLIARAIASESSSTFFTVSSTDLSSKWRGDSEKIVRLLFELARFYAPSIIFIDEIDTLGGQRGNSGEHEASRRVKSEFLVQMDGAQHKFDERRVFVLAATNIPWELDEALRRRFEKRIFIPLP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VFVLAATNIPWELDEALRR
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site
Protein sequence:
MSSRTIMAFDFGTKSIGSAIGQEITGTASPLKAFKAQDGTPNWDDIEKQIKEWQPDLIVVGLPTDLHGKELDVITPKAKKFANRLHGRFGNQVELHDERLSTVEARADLFEFGGYKALSKGNVDCQSAVVILESWFESQWG

Annotated regions:
phrase: RTIMAFDFGTKSIGSAIGQEITGTASPLKAFKAQDGTPNWDDIEKQIKEWQPDLIVVGLPTDLHGKELDVITPKAKKFANRLHGRFGNQVELHDERLSTVE
type: DOMAIN
name: YqgF/RNaseH-like_dom
description: YqgF/RNase H-like domain
Protein sequence:
MQFHSSSALITPFKKDLSVDEAAYETLIKRQIFQGMDACVPVGTTGESATLTHKEHMRCIEIAIETCKSTKTPSNSRMKVLAGVGSNATSESLSLAKFAQKIGADAILCVSPYYNRPTQQGLFEHYKTIAQSVEIPVMLYDVPSRTGVSIEVPTALKLFREVPNIKAIKEASGSLKRVTELHYYEKDFKIFSGEDSLNHSIMFSGGCGVISVTGNLMPNLISQMVNCALKFEYQQALEIQNKLFDLHQALFVETNPIPIKMAMHLAGLIENPSYRLPLVAPSKETIKLLEKTLQQYEVIA

Annotated regions:
phrase: YDVPSRTGVSIEVPTALKLFREVPNIKAIKE
type: ACTIVE_SITE
name: Schiff_base-form_aldolases_AS
description: Schiff base-forming aldolase, active site
Protein sequence:
MNSWEALILGIIQGLTEFLPISSSGHLEIGSYILHTNTSENLLFSIVVHIATALSILIVFKKDIKKIFSSLFKFSNNDDTQFFLKIILSSVPVGLIGIFFEDKVENLFNGNIFLVGIMLIITSIILAITHLQKKDSKKQVSFLSAFIIGIAQSIAILPGISRSGITISTALLLKINKKEATKFSFLMVLIPIFGIMIIKLFESFNSIETLTTEIELTSLTIGFFSALVSGIIACKWMIKIIQKSNLIYFSIYCFIIGSFSIFTSFNNLESKENKIFTIQPIYPVEELKKIALKSSVPLEDSLEDKSDELVDIYNLDSSVKLDIRYATKNNFMQTEFYTEPRAFLISDAAKMLIKAHQELGNYGYGIVIYDAYRPWFVTKMFWEATPDSLKNFVADPSSGSVHNRGCAVDIGLYNIKNGKIIQMISGYDEFTERAYPSYVGGTKKERENRNLLITIMKKYGFQVYKYEWWHFDFKLCNNKIMNLEFNEIDSIINLN

Annotated regions:
Protein sequence:
MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQPASSFYEAQTGEFLLEAEELLKLRETLTKVYGQRTGKPLWVVSEDMERDVFMSATEAQAHGIIDLVAVE

Annotated regions:
phrase: TICMGLAASMG
type: ACTIVE_SITE
name: ClpP_Ser_AS
description: ClpP, Ser active site

phrase: RLAFPHARVMIHQ
type: ACTIVE_SITE
name: ClpP_His_AS
description: ClpP, histidine active site
Protein sequence:
MSDASTPLMRQYNSIKEQVPNALLMFRLGDFYELFFEDAVTAARELEITLTARNKEKGNAIPMCGVPYHAAEGYISRLIQKGFRVAICDQVEDAKLAKKLVRREITRVVTPGTAMDSNLVRSRENNFLAAVGRSGSRSAVAHVDVSTGEFRVTEMEPEEVAGALEHLGAREVLFPGDLPLLTGEDRSGLRFVRTELEDWVFTHDYSDRTLRDHFKLLSLDGCGLANRAAAIGAAGAILHYLRDTQRAALDHLDRPTYYDRADSMVLDSVTVRNLELIEPLFAADAGGIHAQPTVLGVLDQTLTGMGGRLLRQRLLRPSMNRAEIEQRLDAVGELQQQTILRAELRKQLSGILDLERLLAKVTLGSAGPRDVLALGRSLEKIPALKRCFDTQQAARLRNLHDRLDELADVASLILDCISDEPPLNLVDGGTIRAGFHPELDELRDLSQNGKQYIAQIEARERQRTGIGSLKVRFNNVFGYYIEITRANQHLAPADYERKQTLANAERFTTPELKDYERKVLDAEDKILTLEKELFSDVRKRAAAHAQRIRAAAAAVAELDVTASLAQVAAENRYQRPCFSDSGEMRIMAGRHPVIERLTEQEAGRFIPNDLYLNDSTDLLAIITGPNMGGKSTYLRQAALIAILAQIGSFVPAESASLPVIDRIFTRIGASDNLARGRSTFMVEMTETAVILNTATPRSFIVLDEVGRGTATYDGLALAWAVVEYIHQRTRAKTLFATHYHELTELAEQLSGVRNLMVSVKEAGDHIIFLRKVEPGKADRSYGIEVARLAGLPISVIERARDVLKLHERTEHAVSGELVKSEDHGPVQIQMFEPVGYGIAERIRAINVDELRPIEALQLLSELQKELKRS

Annotated regions:
phrase: SFIVLDEVGRGTATYD
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: HAQPTVLGVLDQTLTGMGGRLLRQRLLRPSMNRAEIEQRLDAVGELQQQTILRAELRKQLSGILDLERLLAKVTLGSAGPRDVLALGRSLEKIPALKRCFDTQQAARLRNLHDRLDELADVASLILDCISDEPPLNLVDGGTIRAGFHPELDELRDLSQNGKQYIAQIEARERQRTGIGSLKVRFNNVFGYYIEITRANQHLAPADYERKQTLANAERFTTPELKDYERKVLDAEDKILTLEKELFSDVRKRAAAHAQRIRAAAAAVAELDVTASLAQVAAENRYQRPCFSDSGEMRIMAGRHPVIER
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: GFHPELDELRDLSQNGKQYIAQIEARERQRTGIGSLKVRFNNVFGYYIEITRANQHLAPADYERKQTLANAERFTTPELKDYERKVLDAE
type: DOMAIN
name: DNA_mismatch_repair_MutS_clamp
description: DNA mismatch repair protein MutS, clamp

phrase: TPLMRQYNSIKEQVPNALLMFRLGDFYELFFEDAVTAARELEITLTARNKEKGNAIPMCGVPYHAAEGYISRLIQKGFRVAICDQVEDAKLAKKLVRREITRVVTPGTAMD
type: DOMAIN
name: DNA_mismatch_repair_MutS-lik_N
description: DNA mismatch repair protein MutS-like, N-terminal

phrase: TVRNLELIEPLFAADAGGIHAQPTVLGVLDQTLTGMGGRLLRQRLLRPSMNRAEIEQRLDAVGELQQQTILRAELRKQLSGILDLERLLAKVTLGSAGPRDVLALGRSLEKIPALKRCFDTQQAARLRNLHDRLDELADVASLILDCISDEPPLNLVDGGTIRAGFHPELDELRDLSQNGKQYIAQIEARERQRTGIGSLKVRFNNVFGYYIEITRANQHLAPADYERKQTLANAERFTTPELKDYERKVLDAEDKILTLEKELFSDVRKRAAAHAQRIRAAAAAVAELDVTASL
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: DLLAIITGPNMGGKSTYLRQAALIAILAQIGSFVPAESASLPVIDRIFTRIGASDNLARGRSTFMVEMTETAVILNTATPRSFIVLDEVGRGTATYDGLALAWAVVEYIHQRTRAKTLFATHYHELTELAEQLSGVRNLMVSVKEAGDHIIFLRKVEPGKADRSYGIEVARLAGLPISVIERARDVL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: IITGPNMGGKSTYLRQAALIAILAQIGSFVPAESASLPVIDRIFTRIGASDNLARGRSTFMVEMTETAVILNTATPRSFIVLDEVGRGTATYDGLALAWAVVEYIHQRTRAKTLFATHYHELTELAEQLSGVRNLMVSVKEAGDHIIFLRKVEPGKADRSYGIEVARLAGLPISVIERARDVL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: NFLAAVGRSGSRSAVAHVDVSTGEFRVTEMEPEEVAGALEHLGAREVLFPGDLPLLTGEDRSGLRFVRTELEDWVFTHDYSDRTLRDHFKLLSLDGCGLANRAAAIGAAGAILHYLRDTQRAALDHL
type: DOMAIN
name: DNA_mmatch_repair_MutS_con_dom
description: DNA mismatch repair protein MutS, connector domain
Protein sequence:
MVGRLKESPSQEMIDLLFKPSIRSDLKHHYSYLLKINSVHLFMLKSEGIISDEAASKIHSVLTHLQVTGKEALSINPALEDLYFNVEAYIIEQTGPEIGGQMHTGRSRNDILATVTRMRIREEMLEIYELVCTLRRTLIDLATEHTSTLMTGYTHLQPAEPITFAHYLSALLHGFERDFTRLYNCYAHINKSPLGSCALASTTFSINRKFTMELLGFADLLENSLDGIASRDYALEALSALSIFSNSLSRFAQDLYTWCSYEFGYLEVGHSVAVISSIMPQKKNPVTLEHIKAKAGHIQGALVSSLSVLKNTLYSHSRDTSMESMKYTWEAINETKAAIRLMIKTLQTLTVHKDNMAATTRQNFSTVTELANALVRHYHFSFRTAHHIVAEIVNETLNQGLGSDKIEASTVERAIKQVTAKTVSVTKEFVEQALDPERNISLRTVRGGSAPVEVARQLQQLEQTLASDHQKISDLKQALQSADQLYKHYAAELERGAQ

Annotated regions:
phrase: EGIISDEAASKIHSVLTHLQVTGKEALSINPALEDLYFNVEAYIIEQTGPEIGGQMHTGRSRNDILATVTRMRIREEMLEIYELVCTLRRTLIDLATEHTSTLMTGYTHLQPAEPITFAHYLSALLHGFERDFTRLYNCYAHINKSPLGSCALASTTFSINRKFTMELLGFADLLENSLDGIASRDYALEALSALSIFSNSLSRFAQDLYTWCSYEFGYLEVGHSVAVISSIMPQKKNPVTLEHIKAKAGHIQ
type: DOMAIN
name: Fumarate_lyase_N
description: Fumarate lyase, N-terminal

phrase: FSTVTELANALVRHYHFSFRTAHHIVAEIVNETLNQGLGSDKIEASTVERAIKQVTAKTVSVTKEFVEQALDPERN
type: DOMAIN
name: Arg_succ_lyase_C
description: Argininosuccinate lyase, C-terminal
Protein sequence:
MGTILDKIVDQKKKEVAALYETYTPVKEKRKTRSLVKALEQFTVIAEVKRASPSKGDINLHVDVRKQVKTYEECGAGAVSVLTDGQFFKGSFYDLQTAREESSIPLLCKDFIIDKIQIDRAYEAGADIILLIVAALTKEKLKELYSYVLEKGLEAIVEVHDEQELEIAIQLNPHVIGINNRNLKTFEVDLSQTEKLGKRLNEEKLLWISESGIHSKEDIIRVKRAGAKGVLVGEALMTSSSIHTFFEDCKVNI

Annotated regions:
phrase: LDKIVDQKKKEVAALYETYTPVKEKRKTRSLVKALEQFTVIAEVKRASPSKGDINLHVDVRKQVKTYEECGAGAVSVLTDGQFFKGSFYDLQTAREESSIPLLCKDFIIDKIQIDRAYEAGADIILLIVAALTKEKLKELYSYVLEKGLEAIVEVHDEQELEIAIQLNPHVIGINNRNLKTFEVDLSQTEKLGKRLNEEKLLWISESGIHSKEDIIRVKRAGAKGVLVGEALMTSSSIHTF
type: DOMAIN
name: Indole-3-glycerol_P_synth_dom
description: Indole-3-glycerol phosphate synthase domain

phrase: VKALEQFTVIAEVKRASPSKGDINLHVDVRKQVKTYEECGAGAVSVLTDGQFFKGSFYDLQTAREESSIPLLCKDFIIDKIQIDRAYEAGADIILLIVAALTKEKLKELYSYVLEKGLEAIVEVHDEQELEIAIQLNPHVIGINNRNLKTFEVDLSQTEKLGKRLNEEKLLWISESGIHSKEDIIRVKRAGAKGVLVGEALMTSSSIHTFFE
type: DOMAIN
name: Indole-3-glycerol_P_synth_dom
description: Indole-3-glycerol phosphate synthase domain

phrase: VIAEVKRASPSKGDINLH
type: CONSERVED_SITE
name: Indole-3-GlycerolPSynthase_CS
description: Indole-3-glycerol phosphate synthase, conserved site

phrase: TILDKIVDQKKKEVAALYETYTPVKEKRKTRSLVKALEQFTVIAEVKRASPSKGDINLHVDVRKQVKTYEECGAGAVSVLTDGQFFKGSFYDLQTAREESSIPLLCKDFIIDKIQIDRAYEAGADIILLIVAALTKEKLKELYSYVLEKGLEAIVEVHDEQELEIAIQLNPHVIGINNRNLKTFEVDLSQTEKLGKRLNEEKLLWISESGIHSKEDIIRVKRAGAKGVLVGEALMTSSSIHTFFEDCK
type: DOMAIN
name: Indole-3-glycerol_P_synth_dom
description: Indole-3-glycerol phosphate synthase domain
Protein sequence:
MAKINVLLLCGGGGAEHDISLMSARFFETSLAKSDQFSVLTLTLDKQGRYHTQDGNLCSLTNRREIRFEDPSIAPWAVDYVIPCIHGFPGETGDIQSYFNLIQLPYFGCESEASSNCFNKITAKMWFSALGVPNTPYIFLHQFDQEAIAQTQAAFDTWGSVFIKAASQGSSVGCYKVDVRDNIAKVLEEAFGYAPYVVVEKTIKARELEVAVYEYQGDIIATLPGEIICDTNKFYSFDEKYAKDSKARTDVVASNLSPKLCLQIQDYAIKAFKGMKLRHLSRIDFFLTQDDEILLNEINTFPGLTPISMFPKMLQNHGHDFTEYLSDVISQQLGR

Annotated regions:
phrase: NVLLLCGGGGAEHDISLMSARFFETSLAKSDQFSVLTLTLDKQGRYHTQDGNLCSLTNRREIRFEDPSIAPWAVDYVIPCIHGFPGETGDIQSYFNLIQLPYFG
type: DOMAIN
name: Dala_Dala_lig_N
description: D-alanine--D-alanine ligase, N-terminal domain

phrase: KMWFSALGVPNTPYIFLHQFDQEAIAQTQAAFDTWGSVFIKAASQGSSVGCYKVDVRDNIAKVLEEAFGYAPYVVVEKTIKARELEVAVYEYQGDIIATLPGEIICDTNKFYSFDEKYAKDSKARTDVVASNLSPKLCLQIQDYAIKAFKGMKLRHLSRIDFFLTQDDEILLNEINTFPGLTPISMFPKMLQNHGHDFTEYLSDVI
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold

phrase: SALGVPNTPYIFLHQFDQEAIAQTQAAFDTWGSVFIKAASQGSSVGCYKVDVRDNIAKVLEEAFGYAPYVVVEKTIKARELEVAVYEYQGDIIATLPGEIICDTNKFYSFDEKYAKDSKARTDVVASNLSPKLCLQIQDYAIKAFKGMKLRHLSRIDFFLTQDDEILLNEINTFPGLTPISMFPKMLQNHGHDFTEYLSDV
type: DOMAIN
name: Dala_Dala_lig_C
description: D-alanine--D-alanine ligase, C-terminal

phrase: HGFPGETGDIQ
type: CONSERVED_SITE
name: D-Ala_lig_Van_CS
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site

phrase: MKLRHLSRIDFFLTQDDEILLNEINTFP
type: CONSERVED_SITE
name: D-Ala_lig_Van_CS
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site
Protein sequence:
MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWTVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSASML

Annotated regions:
phrase: PSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWTVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEK
type: DOMAIN
name: CcO_II_C
description: Cytochrome c oxidase subunit 2, C-terminal

phrase: VLHSWTVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSF
type: BINDING_SITE
name: Copper_CuA
description: Copper centre Cu(A)

phrase: SPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWTVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKW
type: DOMAIN
name: Cyt_c_oxidase_su2
description: Cytochrome c oxidase, subunit II

phrase: LTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWTVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLEL
type: DOMAIN
name: CcO_II-like_C
description: Cytochrome c oxidase subunit II-like C-terminal

phrase: AYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLR
type: DOMAIN
name: Cyt_c_oxidase_su2_TM_dom
description: Cytochrome C oxidase subunit II, transmembrane domain

phrase: NPSLTVKTMGHQWYWSYEYTDYEDLSFDSYMIPTSELKPGELRLLEVDNRVVLPMEMTIRMLISSEDVLHSWTVPSLGLKTDAIPGRLNQTTLMSTRPGLYYGQCSEICGSNHSFMPIVLELVPLKYFEKWSA
type: DOMAIN
name: CcO_II-like_C
description: Cytochrome c oxidase subunit II-like C-terminal

phrase: MAYPMQLGFQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAIILILIALPSLRILYMMDEI
type: DOMAIN
name: Cyt_c_oxidase_su2_TM_dom
description: Cytochrome C oxidase subunit II, transmembrane domain