nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTSPGTDSPGKSLQYRVDHLLSAVESELQAGSEKGDPTERELRVGLEESELWLRFKELTNEMIVTKNGRRMFPVLKVNVSGLDPNAMYSFLLDFVAADNHRWKYVNGEWVPGGKPEPQAPSCVYIHPDSPNFGAHWMKAPVSFSKVKLTNKLNGGGQIMLNSLHKYEPRIHIVRVGGPQRMITSHCFPETQFIAVTAYQNEEITALKIKYNPFAKAFLDAKERSDHKDMLEEAGDGQQSGYNQWGWLIPGTSTLCPPATPHPQFGGPLSLPSTHGCERYPALRSHRPAPYPTPYAHRNSSPTYSDSSSACLSMLQPHDNWSSLGMSAHTSMLPMGPNAGPPAGSSQYPSLWSVSSAAVAPGAQAAGVPSGLGAQFFRGSSAHSAPLAHPVSASSSSGSPLYEGAATATDVADSQYDASAQARLLASWTAVSPPSM

Annotated regions:
phrase: LWLRFKELTNEMIVTKNGR
type: CONSERVED_SITE
name: TF_T-box_CS
description: Transcription factor, T-box, conserved site

phrase: VGLEESELWLRFKELTNEMIVTKNGRRMFPVLKVNVSGLDPNAMYSFLLDFVAADNHRWKYVNGEWVPGGKPEPQAPSCVYIHPDSPNFGAHWMKAPVSFSKVKLTNKLNGGGQIMLNSLHKYEPRIHIVRVGGPQRMITSHCFPETQFIAVTAYQNEEITALKIKYNPFAKAF
type: DOMAIN
name: T-box_DNA-bd
description: T-box transcription factor, DNA-binding domain

phrase: TNEMIVTKNGRRMFPVLKVNVSGL
type: DOMAIN
name: T-box_DNA-bd
description: T-box transcription factor, DNA-binding domain

phrase: YIHPDSPNFGAHW
type: DOMAIN
name: T-box_DNA-bd
description: T-box transcription factor, DNA-binding domain

phrase: VSFSKVKLT
type: DOMAIN
name: T-box_DNA-bd
description: T-box transcription factor, DNA-binding domain

phrase: MLNSLHKYEPRIHI
type: DOMAIN
name: T-box_DNA-bd
description: T-box transcription factor, DNA-binding domain

phrase: TQFIAVTAYQNEE
type: DOMAIN
name: T-box_DNA-bd
description: T-box transcription factor, DNA-binding domain

phrase: NPFAKAFL
type: DOMAIN
name: T-box_DNA-bd
description: T-box transcription factor, DNA-binding domain

phrase: LEESELWLRFKELTNEMIVTKNGRRMFPVLKVNVSGLDPNAMYSFLLDFVAADNHRWKYVNGEWVPGGKPEPQAPSCVYIHPDSPNFGAHWMKAPVSFSKVKLTNKLNGGGQIMLNSLHKYEPRIHIVRVGGPQRMITSHCFPETQFIAVTAYQNEEITALKIKYNPFAKAFL
type: DOMAIN
name: T-box_DNA-bd
description: T-box transcription factor, DNA-binding domain

phrase: ELRVGLEESELWLRFKELTNEMIVTKNGRRMFPVLKVNVSGLDPNAMYSFLLDFVAADNHRWKYVNGEWVPGGKPEPQAPSCVYIHPDSPNFGAHWMKAPVSFSKVKLTNKLNGGGQIMLNSLHKYEPRIHIVRVGGPQRMITSHCFPETQFIAVTAYQNEEITALKIKYNPFAKAFLDAKER
type: DOMAIN
name: T-box_DNA-bd
description: T-box transcription factor, DNA-binding domain

phrase: IHPDSPNFGAHWMKAPVS
type: CONSERVED_SITE
name: TF_T-box_CS
description: Transcription factor, T-box, conserved site
Protein sequence:
MKDTVYLDPIEDAIAAIKNGEIIIVVDDDDRENEGDFICAAEKVTPEIINFMATHGRGLICAPLVEDRCEELGLDLMVGTNTAAFETPFTVSVDLVGHGCTTGISASDRSKTIKALLDPTISPEELGKPGHIFPLKAKRGGVLRRSGHTEAAIDLARLAGLQPAGVLVEIMNEDGTMARLSDLVHVAKKFDLKLISIKDLIAYRLKNDSLIKREIGVEMPTEYGDFKLVAYRQTNTDEVHMALIKGEWKEGETVMVRVHSSCITGDIFGSCRCDCGAQLHEAMKMVEKHGKGIVLYMNQEGRGIGLVNKLKAYKLQEEGMDTVQANLALGFPMDKRDYGVGAQILRDLGVCKISLITNNPTKRVGLSGYGLEIVETVPLEIGSNPHNEKYLMTKRDKMGHQIMKS

Annotated regions:
phrase: GVEMPTEYGDFKLVAYRQTNTDEVHMALIKGEWKEGETVMVRVHSSCITGDIFGSCRCDCGAQLHEAMKMVEKHGKGIVLYMNQEGRGIGLVNKLKAYKLQEEGMDTVQANLALGFPMDKRDYGVGAQILRDLGVCKISLITNNPTKRVGLSGYGLEIVETV
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MNKTYLPSQGAIERNWYVVDAADQRLGRLATEIARVLRGKHKPTYTPHMDTGDFVIVINADKVTVTGRKASQKLYRRHSGRPGGMKVETFAHLQQRLPERIIEQAVKGMLPKNALGRQLFTKLKVYRGAEHPHQAQQPEVLSIQTFAGDDN

Annotated regions:
phrase: VKGMLPKNALGRQLFTKLKVYR
type: CONSERVED_SITE
name: Ribosomal_uL13_CS
description: Large ribosomal subunit protein uL13, conserved site
Protein sequence:
MSSSNLAGNTNTTTTSSAASAAAAHSAANASTITSEYSTTQTTTGTFNTDTLSSIGSTSTLHGSQPSQPPPPPPPQVSSPIAAAAAASAALVAQLNPADRWPTEPSAYKLDESIGVGATATVFTAYCLPRNEKVAIKCINLEKCQTSVDELSHEIQAMSQCNHPNVVSYYTSFIAQEELWVVMRLLNCGSMLDILKRKVKAIGKEQAQFGVLDEVSIATVLREVLKGLEYFHLNGQIHRDIKAGNILLADDGTIQIADFGVSGWLASSGGDLSRQKVRHTFVGTPCWMAPEVMEQVQGYDFKADIWSLGILAIELATGTAPYHKYPPMKVLMLTLQNDPPTLETNAERKDQYKAYGKSFKTLIRDCLQKDPAKRPTASELLKYSFFKKGKDKKYLVHTLIENLASVPVVAHHSSKKVASGKLRKDAHGNWEFEYDSPQESDDDSDLEDEEREKKKKKASASASGAGAAGAAGGATGGAASGAPSAQEGGGATTPCPETLNMVLRVRNQQRELNDIKFDYTKSADTVEGIAHELVTAELIDCHDLVIVAANLQKLIDFAESKSDRRSITFALNSGVHANEIPDERTLTGFAQISLLD

Annotated regions:
phrase: YKLDESIGVGATATVFTAYCLPRNEKVAIKCINLEKCQTSVDELSHEIQAMSQCNHPNVVSYYTSFIAQEELWVVMRLLNCGSMLDILKRKVKAIGKEQAQFGVLDEVSIATVLREVLKGLEYFHLNGQIHRDIKAGNILLADDGTIQIADFGVSGWLASSGGDLSRQKVRHTFVGTPCWMAPEVMEQVQGYDFKADIWSLGILAIELATGTAPYHKYPPMKVLMLTLQNDPPTLETNAERKDQYKAYGKSFKTLIRDCLQKDPAKRPTASELLKYSF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: IGVGATATVFTAYCLPRNEKVAI
type: BINDING_SITE
name: Protein_kinase_ATP_BS
description: Protein kinase, ATP binding site

phrase: YKLDESIGVGATATVFTAYCLPRNEKVAIKCINLEKCQTSVDELSHEIQAMSQCNHPNVVSYYTSFIAQEELWVVMRLLNCGSMLDILKRKVKAIGKEQAQFGVLDEVSIATVLREVLKGLEYFHLNGQIHRDIKAGNILLADDGTIQIADFGVSGWLASSGGDLSRQKVRHTFVGTPCWMAPEVMEQVQGYDFKADIWSLGILAIELATGTAPYHKYPPMKVLMLTLQNDPPTLETNAERKDQYKAYGKSFKTLIRDCLQKDPAKRPTASELLKYSF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: YKLDESIGVGATATVFTAYCLPRNEKVAIKCINLEKCQTSVDELSHEIQAMSQCNHPNVVSYYTSFIAQEELWVVMRLLNCGSMLDILKRKVKAIGKEQAQFGVLDEVSIATVLREVLKGLEYFHLNGQIHRDIKAGNILLADDGTIQIADFGVSGWLASSGGDLSRQKVRHTFVGTPCWMAPEVMEQVQGYDFKADIWSLGILAIELATGTAPYHKYPPMKVLMLTLQNDPPTLETNAERKDQYKAYGKSFKTLIRDCLQKDPAKRPTASELLKYSF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: LNMVLRVRNQQRELNDIKFDYTKSADTVEGIAHELVTAELIDCHDLVIVAANLQKLI
type: DOMAIN
name: Kinase_OSR1/WNK_CCT
description: Serine/threonine-protein kinase OSR1/WNK, CCT domain
Protein sequence:
MDYLPVFADLTGRPVLVVGGGDVAARKIHLLRRSGAVIQLVARQLCTELQELHHQQEIHWQATEFTEQQLDTVFLVIAATDDSALNQRVYEAAELRQKLVNVVDDQARCTFIFPSIVDRSPLVVAISSGGTAPVLARIWREKLEALLPTSLGDMARIAGQWREKVKQQFPSMKQRRYYWERLLGGRFGALVAAGRLKEAEQLADHELHHQDSPKGEIYLVGAGPGDPGLLTLRGLQVLQLADVVLYDHLVSEEVLDLCRRDAERICVGKRAGAHLVIQEETNRLLVSHALEGKRVVRLKGGDPFIFGRGGEELQVAAEAGIPFQVVPGITAASGATAYAGIPLTHREHSQSVLFITGHCRAGNDLDWPSLARARQTLAIYMGAVNAATISSQLIAHGREGTTPVAIISRGTRADQQIIKGTLAGLESLAQQAPSPALLVIGEVVLLQDQLAWFQTSSSQLHEDPLLNPSV

Annotated regions:
phrase: IYLVGAGPGDPGLLTLRGLQVLQLADVVLYDHLVSEEVLDLCRRDAERICVGKRAGAHLVIQEETNRLLVSHALEGKRVVRLKGGDPFIFGRGGEELQVAAEAGIPFQVVPGITAASGATAYAGIPLTHREHSQSVLFITGHCRAGNDLDWPSLARARQTLAIYMGAVNAATISSQLIAHGREGTTPVAIISRGTRADQQIIKGTLAG
type: DOMAIN
name: 4pyrrol_Mease
description: Tetrapyrrole methylase

phrase: VVRLKGGDPFIFGRGGEELQVAAEAGIPFQVVP
type: CONSERVED_SITE
name: Uropor_MeTrfase_CS
description: Uroporphiryn-III C-methyltransferase, conserved site

phrase: VGAGPGDPGLLTLR
type: CONSERVED_SITE
name: Uropor_MeTrfase_CS
description: Uroporphiryn-III C-methyltransferase, conserved site

phrase: VGAGPGDPGLLTLRGLQVLQLADVVLYDHLVSEEVLDLCRRDAERICVGKRAGAHLVIQEETNRLLVSHALEGKRVVRLKGGDPFIFGRGGEELQVAAEAGIPFQVVPGITAASGATAYAGIPLTHREHSQSVLFITGHCRAGNDLDWPSLARARQTLAIYMGAVNAATISSQLIAHGREGTTPVAIISRGTRADQQIIKGTLAGLESLAQQAPSPALLVIGEV
type: DOMAIN
name: CobA/CysG_C
description: Uroporphyrin-III C-methyltransferase

phrase: GEIYLVGAGPGDPGLLTLRGLQVLQLADVVLYDHLVSEEVLDLCRRDAERICVGKRAGAHLVIQEETNRLLVSHALEGKRVVRLKGGDPFIFGRGGEELQVAAEAGIPFQVVPGITAASGATAYAGIPLTHREHSQSVLFITGHCRAGNDLDWPSLARARQTLAIYMGAVNAATISSQLIAHGREGTTPVAIISRGTRADQQIIKGTLAGLESLAQQAPSPALLVIGEVVL
type: DOMAIN
name: CobA/CysG_C
description: Uroporphyrin-III C-methyltransferase

phrase: LPVFADLTGRPVLVVGGGDVAARKIHLLRRSGAVIQLVARQLCTELQELHHQQEIHWQATEFTEQQLDTVFLVIAATDDSALNQRVYEAAELRQKLVNVVDDQARCTFIFPSIVDRSPLVVAISSGGTAPVLARIWREKLEALLPTSLGDMARIAGQWREKVKQQFPSMKQRRYYWERLLGGRFGALVAAGRLKEAEQLADHE
type: DOMAIN
name: Sirohaem_synthase_N
description: Sirohaem synthase, N-terminal

phrase: SLGDMARIAGQWREKVKQQFPSMKQRRYYWERLLGGRFGALVAAGRLKEAEQLADHE
type: DOMAIN
name: Sirohaem_synthase_dimer_dom
description: Sirohaem synthase, dimerisation domain
Protein sequence:
MKKVFIRTFGCQMNEYDSEKMLSVLAEEHGGIEQVTQADEADIILFNTCSVREKAQEKVFSDLGRVRPLKEKNPGLIIGVAGCVASQEGENIIKRAPYVDVVFGPQTLHRLPKMIVDKETSGLSQVDISFPEIEKFDHLPPARVEGGAAFVSIMEGCSKYCSFCVVPYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRGEMDDGEICDFATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHLHLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFDLSFVFIYSPRPGTPAANLPDDTPHEEKVRRLEALNEVIEAETARINQTMIGTVQRCLVEGISKKDPDQLQARTVNNRVVNFTGTPDMINQMIDLEITEAYTFSLRGKIVEA

Annotated regions:
phrase: QTMIGTVQRCLVEGISKKDPDQLQARTVNNRVVNFTGTPDMINQMIDLEITEAYTFSLRGKIV
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: VSIMEGCSKYCSFCVVPYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRGEMDDGEICDFATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHLHLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: RVEGGAAFVSIMEGCSKYCSFCVVPYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRGEMDDGEICDFATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHLHLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFDLSFVFIYSPRPGTPAANLPDDTPHEEKVRRLEALNEVIEAETA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: GAAFVSIMEGCSKYCSFCVVPYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRGEMDDGEICDFATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHLHLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFDLSFVFIYSPRPGTPAANLPDDTPHEEKVRRLE
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: MKKVFIRTFGCQMNEYDSEKMLSVLAEEHGGIEQVTQADEADIILFNTCSVREKAQEKVFSDLGRVRPLKEKNPGLIIGVAGCVASQEGENIIKRAPYVDVVFGPQTLHRLPKMIVDKETSGLSQVDISFPEIEKFDHLPPARVEGGAAFVSIMEGCSKYCSFCVVPYTRGEEFSRPLNDVLTEIANLAQQGVKEINLLGQNVNAYRGEMDDGEICDFATLLRIVHEIPGIERMRFTTSHPREFTDSIIECYRDLPKLVSHLHLPIQSGSDRVLSAMKRGYTALEYKSIIRKLRAIRPDLCLSSDFIVGFPGETEREFEQTLKLVKDIAFDLSFVFIYSPRPGTPAANLPDDTPHEEKVRRLEALNEVIEAETARINQTMIGTVQRCLVEGISKKDPDQLQARTVNNRVVNFTGTPDMINQMIDLEITEAYTFSLRGKIV
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: KKVFIRTFGCQMNEYDSEKMLSVLAEEHGGIEQVTQADEADIILFNTCSVREKAQEKVFSDLGRVRPLKEKNPGLIIGVAGCVASQEGENIIKRAPYVDVVFGPQTLHRLPKMIVDKE
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: VSIMEGCSKYCSFCVVPYTR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: KVFIRTFGCQMNEYDSEKMLSVLAEEHGGIEQVTQADEADIILFNTCSVREKAQEKVFSDLGRVRPLKEKNPGLIIGVAGCVASQEGENIIKRAPYVDVVF
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: QTMIGTVQRCLVEGISKKDPDQLQARTVNNRVVNFTGTPDMINQMIDLEITEAYTFSLRGKI
type: DOMAIN
name: TRAM_dom
description: TRAM domain
Protein sequence:
MQIDVDPQEDPQNAPDVNYVVENPTLDLEQYAASYSGLMRIERLQFIADRCPPLRVEALKMALSFVQRTFNVDMYEEIHRKLSEATRELQNAPDAIPESGVEPPPLDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAELAARKYKQAAKCFLLASFDHCDFPELLSPSNVAVYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHKMAAAFNTTVAALEDELTQVILEGLINARIDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMILRAAVLRNQIHVKSPPREGSQGELTPANSQSRMSTNM

Annotated regions:
phrase: CFLLASFDHCDFPELLSPSNVAVYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHKMAAAFNTTVAALEDELTQVILEGLINARIDSHSKILYARDVD
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain

phrase: PHVRTLYTQIRNRALIQYFSPYVSADMHKMAAAFNTTVAALEDELTQVILEGLINARIDSHSKILYARDVDQRSTTFEKSLLM
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain

phrase: DTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAILTKLKCAAGLAELAARKYKQAAKCFLLASFDHCDFPELLSPSNVAVYGGLCALATFDRQELQ
type: DOMAIN
name: Rpn7_N
description: 26S proteasome regulatory subunit Rpn7, N-terminal

phrase: QRSTTFEKSLLMGKEFQRRAKAMILRA
type: DOMAIN
name: CSN1_C
description: COP9 signalosome complex subunit 1, C-terminal helix

phrase: DEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHKMAAAFNTTVAALEDELTQVILEGLINARIDSHSKILYA
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain
Protein sequence:
MGFWCRMLENQEQEEVITVRVQDPRVQNEGSWNSYVDYKIFLHTNSKAFTAKTSCVRRRYREFVWLRKQLQRNAGLVPVPELPGKSTFFGSSDEFIEKRRQGLQHFLEKVLQSVVLLSDSQLHLFLQSQLSVPEIEACVQGRSPVSVSDAILRYAMSNCGWAQEERRGSSHLAEGDQPKSCCFLPRPGRRSSPSPPPGEEKDPFEVWAPVVDSEAPPLESPTLPPTSSPSCCGFARPDEGLSASQPVRRVLGGGHAVPLDPGQLETVLEK

Annotated regions:
phrase: EEVITVRVQDPRVQNEGSWNSYVDYKIFLHTNSKAFTAKTSCVRRRYREFVWLRKQLQRNAGLVPVPELPGKSTFFGSSDEFIEKRRQGLQHFLEKVLQSVVLLSDSQLHLFLQS
type: DOMAIN
name: PX_dom
description: Phox homology

phrase: FTAKTSCVRRRYREFVWLRKQLQRNAGLVPVPELPGKSTFFGSSDEFIEKRRQGLQHFLEKVLQSVVLLSDSQLHLFLQS
type: DOMAIN
name: PX_dom
description: Phox homology

phrase: VITVRVQDPRVQNEGSWNSYVDYKIFLHTNSKAFTAKTSCVRRRYREFVWLRKQLQRNAGLVPVPELPGKSTFFGSSDEFIEKRRQGLQHFLEKVLQSVVLLSDSQLHLFLQSQLS
type: DOMAIN
name: PX_dom
description: Phox homology
Protein sequence:
MSETIISAEVVEKNNAARKPDLERDYASLGERLDRRGIAIDAIRAKVEKFAVAIPSWGVGTGGTRFARFPGAGEPRDIFDKIEDCAVISQLTQATPTVSLHIPWDKADPNRLKQAASRFGLGFDAMNSNTFSDARDQKLSYKFGSLSHADAGTRRQAVEHNLECIEIGKTLGSKALTVWIGDGSNFPGQVNFARAFERYLDAMKAVYAGLPADWKLFTEHKMYEPAFYSTVVQDWGTNYLIAKELGDRAFCLVDLGHHAPNVNIEMIVSRLIQFKKLGGFHFNDSKYGDDDLDAGSIDPYRLFLVFNELVDAELSGAEGFDPAHMLDQSHNVTDPIESLMLSAVEVQRAYAQALLVDRKALEGFQDGNDALMATQTLKAAYRTDVEPILAMARLKTGGAIDPVATYRAAGYRAKVAAERPAVTGGSGGIV

Annotated regions:
phrase: LHIPWDKADPNRLKQAASRFGLGFDAMNSNTFSDARDQKLSYKFGSLSHADAGTRRQAVEHNLECIEIGKTLGSKALTVWIGDGSNFPGQVNFARAFERYLDAMKAVYAGLPADWKLFTEHKMYEPAFYSTVVQDWGTNYLIAKELGDRAFCLVDLGHHAPNVNIEMIVSRLIQFKKLGGFHFNDSKYGD
type: DOMAIN
name: Xyl_isomerase-like_TIM-brl
description: Xylose isomerase-like, TIM barrel domain
Protein sequence:
MTNEAGYVVAILGATGAVGTRILAQLEQSTITVKSLKLLASVRSAGQTRQFRGQDIVVEEATPDSFDGVDLVLASAGGSLAGKLLPEAVKRGAVAVDNSSRWRMDPNVPLVVPEVNPEALASHQGIIANPNCSTIQMVVALEPLRKAYGLNQVIVSTYQAASGAGQRAWDELLHQAQQHLDGETETADILPTKGDKKHFPLAFNLLPQIDVFQDDGYSFEEQKMMQETKKILFGDPKSSEVKVTATAVRVPVPIGHGESVYVSVADESATREDVQHILASAPGVILEDDPANQVYPQPINAVGKRETFVGRVRADNENPGSFNLWVVSDNLLKGAAWNTVQIAEELVKRDLIHSQAK

Annotated regions:
phrase: VVAILGATGAVGTRILAQLEQSTITVKSLKLLASVRSAGQTRQFRGQDIVVEEATPDSFDGVDLVLASAGGSLAGKLLPEAVKRGAVAVDNSSRWRMDPNVPLVVPEVNPEALAS
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: LEPLRKAYGLNQVIVSTYQAASGAGQRAWDELLHQAQQHLDGETETADILPTKGDKKHFPLAFNLLPQIDVFQDDGYSFEEQKMMQETKKILFGDPKSSEVKVTATAVRVPVPIGHGESVYVSVADESATREDVQHILASAPGVILEDDPANQVYPQPINAVGKRETFVGRVRADNENPGSFNLWVVSDNLL
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: VAILGATGAVGTRILAQLEQSTITVKSLKLLASVRSAGQTRQFRGQDIVVEEATPDSFDGVDLVLASAGGSLAGKLLPEAVKRGAVAVDNSSRWRMDPNVPLVVPEVNPEALA
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MARYTGPATRKSRRLRVDLVGGDMAFERRPYPPGQAGRARIKESEYLLQLQEKQKARFIYGVMEKQFRRYYAEANRRAGKTGENLVVLLESRLDNVVYRAGLANTRRQARQLVSHGHFTVNGKAIDVPSFRVSQYDIINVREKSQKMNWFEEAQDNLADAVVPAWLQVVPENLRILVHQLPERAQIDIPLQEQLIVEFYSK

Annotated regions:
phrase: LESRLDNVVYRAGLANTRRQARQL
type: CONSERVED_SITE
name: Ribosomal_uS4_CS
description: Small ribosomal subunit protein uS4, conserved site

phrase: RYTGPATRKSRRLRVDLVGGDMAFERRPYPPGQAGRARIKESEYLLQLQEKQKARFIYGVMEKQFRRYYAEANRRAGKTGENLVVLL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: SRLDNVVYRAGLANTRRQARQLVSHGHFTVNGKAIDVPSFRVSQYDIINVREKSQKMNWFEEAQ
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: RLDNVVYRAGLANTRRQARQLVSHGHFTVNGKAIDVPSFRVSQYD
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: RYTGPATRKSRRLRVDLVGGDMAFERRPYPPGQAGRARIKESEYLLQLQEKQKARFIYGVMEKQFRRYYAEANRRAGKTGENLVVLL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal
Protein sequence:
MRGLRPALSTFIFLLLITGGVYPLLTTVLGQWWFPWQANGSLIREGDTVRGSALIGQNFTGNGYFQGRPSATAEMPYNPQASGGSNLAVSNPELDKQIAARVAALRAANPDASTNVPVELVTASASGLDNNITPQAAAWQIPRVAKARNLSVEQLTQLIAKYSQQPLVKYIGQPVINIVELNLALDKLDE

Annotated regions:
Protein sequence:
MSHRKFEAPRHGSLGFRPRRRTRHHRGRCRSFPKDDPSKKPHLTAFTGFKAGMTHILREVDRSGSRHNKKEVVEAVTVIECPPMTIVGVVGYIDTPRGLRALTTVWAKTIDNNTKKRFYKNWANSNKKAFTHHEKNFDQKAQDLLLKRIEKYCSVVRVIAHTNMSKLNLRQKKNHILEIQVNGGKVAEKVAFAKSLLEKEVKVDSIFAENEMLDVLGVTKGKGFAGVIKRFGVKHLQKKTHRGYRKVGCIGAWHPSRIRFTVPRAGQLGYHHRTETNKKVYRVGKGDDASNASTAGDVTDKAITPLGGFPHYGVVKNDFIMIKGCCVGPKKRVLTLRKSIIPQTHGAAKEIINLKFIDTSSKIGHGRFQTVEEKDKFFGRDRTKKVEAKSE

Annotated regions:
phrase: FAENEMLDVLGVTKGKGFAGVIK
type: CONSERVED_SITE
name: Ribosomal_uL3_CS
description: Large ribosomal subunit protein uL3, conserved site
Protein sequence:
MKKHKMLSLLAVSGLMGIGILAGCSNDSSSSSKGTINIVSREEGSGTRGAFIELFGIESKNKKGEKVDHTSDAATVTNSTSVMLTTVSKDPSAIGYSSLGSLNSSVKVLKIDGKNATVKDIKSGSYKISRPFNIVTKEGKEKEATKDFIDYILSKDGQAVVEKNGYIPLDNAKAYQAKVSSGKVVIAGSSSVTPVMEKIKEAYHKVNAKVDVEIQQSDSSTGITSAIDGSADIGMASRELDKTESSKGVKATVIATDGIAVVVNKKNKVNDLSTKQVKDIFTGKTTSWSDLSK

Annotated regions:
phrase: SSSKGTINIVSREEGSGTRGAFIELFGIESKNKKGEKVDHTSDAATVTNSTSVMLTTVSKDPSAIGYSSLGSLNSSVKVLKIDGKNATVKDIKSGSYKISRPFNIVTKEGKEKEATKDFIDYILS
type: DOMAIN
name: PBP_domain
description: PBP domain

phrase: SSGKVVIAGSSSVTPVMEKIKEAYHKVNAKVDVEIQQSDSSTGITSAIDGSADIGMASRELDKTESSKGVKATVIATDGIAVVVNKKNKVNDLSTKQVKDIFTGKTTSWS
type: DOMAIN
name: PBP_domain
description: PBP domain
Protein sequence:
MLKRYLVLSVATAAFSLPSLVNAAQQNILSVHILNQQTGKPAADVTVTLEKKADNGWLQLNTAKTDKDGRIKALWPEQTATTGDYRVVFKTGDYFKKQNLESFFPEIPVEFHINKVNEHYHVPLLLSQYGYSTYRGS

Annotated regions:
phrase: YHVPLLLSQYGY
type: CONSERVED_SITE
name: Transthyretin_CS
description: Transthyretin, conserved site

phrase: AAQQNILSVHILNQQTGKPAADVTVTLEKKADNGWLQLNTAKTDKDGRIKALWPEQTATTGDYRVVFKTGDYFKKQNLESFFPEIPVEFHINKVNEHYHVPLLLSQYGYSTYRG
type: DOMAIN
name: Transthyretin/HIU_hydrolase_d
description: Transthyretin/hydroxyisourate hydrolase domain

phrase: HILNQQTGKPAADVT
type: BINDING_SITE
name: Thyroxine_BS
description: Transthyretin, thyroxine binding site

phrase: LSVHILNQQTGKPAADVTVTLEKKADNGWLQLNTAKTDKDGRIKALWPEQTATTGDYRVVFKTGDYFKKQNLESFFPEIPVEFHINKVNEHYHVPLLLSQYGYSTYR
type: DOMAIN
name: Transthyretin/HIU_hydrolase_d
description: Transthyretin/hydroxyisourate hydrolase domain

phrase: AQQNILSVHILNQQTGKPAADVTVTLEKKADNGWLQLNTAKTDKDGRIKALWPEQTATTGDYRVVFKTGDYFKKQNLESFFPEIPVEFHINKVNEHYHVPLLLSQYGYSTYR
type: DOMAIN
name: Transthyretin/HIU_hydrolase_d
description: Transthyretin/hydroxyisourate hydrolase domain
Protein sequence:
METGSPGKRPVLPKRARLLVTAGMGMLALLLFGPRLVDIYVDWLWFGEVGFRSVWITVLLTRLAIVAAVALVVAGIVLAALLLAYRSRPFFVPDEPQRDPVAPLRSAVMRRPRLFGWGIAVTLGVVCGLIASFDWVKVQLFVHGGTFGIVDPEFGYDIGFFVFDLPFYRSVLNWLFVAVVLAFLASLLTHYLFGGLRLTTGRGMLTQAARVQLAVFAGAVVLLKAVAYWLDRYELLSSGRKEPTFTGAGYTDIHAELPAKLVLVAIAVLCAVSFFTAIFLRDLRIPAMAAALLVLSAILVGGLWPLLMEQFSVRPNAADVERPYIQRNIEATREAYRIGGDWVQYRSYPGIGTKQPRDVPVDVTTIAKVRLLDPHILSRTFTQQQQLKNFFSFAEILDIDRYRIDGELQDYIVGVRELSPKSLTGNQTDWINKHTVYTHGNGFVAAPANRVNAAARDAENISDSNSGYPIYAVSDIASLGSGRQVIPVEQPRVYYGEVIAQADPDYAIVGGAPGSAPREYDTDTSKYTYTGAGGVSIGNWFNRTVFATKFAQHKFLFSREIGSESKVLIHRDPKERVQRVAPWLTTDDNPYPVVVNGRIVWIVDAYTTLDTYPYAQRSSLEGPVTSPTGIVRQGKQVSYVRNSVKATVDAYDGTVTLFQFDRDDPVLRTWMRAFPGTVKSEDQIPDELRAHFRYPEDLFEVQRSLLAKYHVDEPREFFTTNAFWSVPSDPTNDANATQPPFYVLVGDQQSAQPSFRLASAMVGYNREFLSAYISAHSDPANYGKLTVLELPTDTLTQGPQQIQNSMISDTRVASERTLLERSNRIHYGNLLSLPIADGGVLYVEPLYTERISTSPSSSTFPQLSRVLVSVREPRTEGGVRVGYAPTLAESLDQVFGPGTGRVATAPGGDAASAPPPGAGGPAPPQAVPPPRTTQPPAAPPRGPDVPPATVAELRETLADLRAVLDRLEKAIDAAETPGG

Annotated regions:
Protein sequence:
MNPNQILENLKKELSENEYENYIAILKFNEKQSKADFLVFNAPNELLAKFIQTKYGKKISHFYEVQSGNKASVLIQAQSAKQSSKSTKIDIAHIKAQSTILNPSFTFESFVVGDSNKYAYGACKAISQKDKLGKLYNPIFIYGPTGLGKTHLLQAVGNASLEMGKKVIYATSENFINDFTSNLKNGSLDKFHEKYRNCDVLLIDDVQFLGKTDKIQEEFFFIFNEIKNNDGQIIMTSDNPPNMLKGITERLKSRFAHGIIADITPPQLDTKIAIIRKKCEFNDINLSNDIINYIATSLGDNIREIEGIIISLNAYATILGQEITLELAKSVMKDHIKEKKENITIDDILSLVCKEFNIKPSDVKSNKKTQNIVTARRIVIYLARALTALTMPQLANYFEMKDHTAISHNVKKITEMIENDGSLKAKIEELKNKILVKSQS

Annotated regions:
phrase: LNPSFTFESFVVGDSNKYAYGACKAISQKDKLGKLYNPIFIYGPTGLGKTHLLQAVGNASLEMGKKVIYATSENFINDFTSNLKNGSLDKFHEKYRNCDVLLIDDVQFLGKTDKIQEEFFFIFNEIKNNDGQIIMTSDNPPNMLKGITERLKSRFAHGII
type: DOMAIN
name: DnaA_dom
description: Chromosomal replication initiator protein DnaA, ATPAse domain

phrase: NQILENLKKELSENEYENYIAILKFNEKQSKADFLVFNAPNELLAKFIQTKYGKKIS
type: DOMAIN
name: DnaA_N_dom
description: DnaA N-terminal domain

phrase: LYNPIFIYGPTGLGKTHLLQAVGNASLEMGKKVIYATSENFINDFTSNLKNGSLDKFHEKYRNCDVLLIDDVQFLGKTDKIQEEFFFIFNEIKNNDGQIIMTSDNPPNMLKGITERLKSRFAHGII
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: IDDILSLVCKEFNIKPSDVKSNKKTQNIVTARRIVIYLARALTALTMPQLANYFEMKDHTAISHNVKK
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: IDDILSLVCKEFNIKPSDVKSNKKTQNIVTARRIVIYLARALTALTMPQLANYFEMKDHTAISHNVKKITEMIENDGSLKAKIEELKNK
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: LANYFEMKDHTAISHNVKK
type: CONSERVED_SITE
name: Chromosome_initiator_DnaA_CS
description: Chromosomal replication control, initiator DnaA, conserved site

phrase: TIDDILSLVCKEFNIKPSDVKSNKKTQNIVTARRIVIYLARALTALTMPQLANYFEMKDHTAISHNVKK
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal
Protein sequence:
MTKRALISVSDKSGIVDFAKELKNLGWDIISTGGTKVALDNAGVETIAIDDVTGFPEMMDGRVKTLHPNIHGGLLARRDADSHLQAAKDNNIELIDLVVVNLYPFKETILRPDITYDLAVENIDIGGPSMLRSAAKNHASVTVVVDPADYATVLGELADAGQTTFETRQRLAAKVFRHTAAYDALIAEYFTTQVGEAKPEKLTITYDLKQAMRYGENPQQDADFYQKALPTDYSIASAKQLNGKELSFNNIRDADAAIRIIRDFKDRPTVVVLKHMNPCGIGQADDIETAWDYAYEADPVSIFGGIVVLNREVDAATAKKMHPIFLEIIIAPSYSEEALAILTNKKKNLRILELPFDAQAASEVEAEYTGVVGGLLVQNQDVVAENPSDWQVVTDRQPTEQEATALEFAWKAIKYVKSNGIIITNDHMTLGLGAGQTNRVGSVKIAIEQAKDHLDGAVLASDAFFPFADNIEEIAAAGIKAIIQPGGSVRDQDSIDAANKHGLTMIFTGVRHFRH

Annotated regions:
phrase: GIVDFAKELKNLGWDIISTGGTKVALDNAGVETIAIDDVTGFPEMMDGRVKTLHPNIHGGLLARRDADSHLQAAKDNNIELIDLVVVNLYPFKETILRPDITYDLAVENIDIGGP
type: DOMAIN
name: MGS-like_dom
description: Methylglyoxal synthase-like domain

phrase: MTKRALISVSDKSGIVDFAKELKNLGWDIISTGGTKVALDNAGVETIAIDDVTGFPEMMDGRVKTLHPNIHGGLLARRDADSHLQAAKDNNIELIDLVVVNLYPFKETILRPDITYDLAVENIDIGGPSMLRSAAKNHASVTVV
type: DOMAIN
name: MGS-like_dom
description: Methylglyoxal synthase-like domain

phrase: GIVDFAKELKNLGWDIISTGGTKVALDNAGVETIAIDDVTGFPEMMDGRVKTLHPNIHGGLLARRDADSHLQAAKDNNIELIDLVVVNLYPFKETILRPDITYDLAVENIDIGG
type: DOMAIN
name: MGS-like_dom
description: Methylglyoxal synthase-like domain
Protein sequence:
MQNRTGLILCALALLMGFLMVCLGAFFISWGSIFDCQGSLIAAYLLLPLGFVILLSGIFWSNYRQVTESKGVLRHMLRQHLAHGALSVATVDRPDFYPPAYEESLEVEKQSCPAEREASGIPPPLYTETGLEFQDGNDSHPEAPPSYRESIASLVVTAISEDAQRRGQEC

Annotated regions:
Protein sequence:
MRYSKNFDVIVVGGGHAGTEAALASARMGCDTLLITHSIENLGAMSCNPSIGGIGKGHLVKEIDAMGGAMAAATDEAGIQFRILNSSKGPAVRATRAQGDRVLYKAAIRRRLENQPNLSLFQAAVDDLPVKGDEVQGVVTQMGLEFMAKKVVLTAGTFLDGKIHVGLNNYAGGRAGDPAAVSLSARLKELKLPQGRLKTGTPPRIDGLTIDFSVMLEQPGDLDPVPVFSYLGRPEQHPKQVPCWISHTNEKTHDIIRGGLDRSPMYTGVIKGVGPRYCPSIEDKIHRFASRNSHQIFLEPEGLTTNEFYPNGISTSLPFDVQWDLVRSIRGMESAVIVRPGYAIEYDFFDPRQLRHSLETKVIGGLYFAGQINGTTGYEEAAAQGMLAGINAGLAAKGKEPWLPKRSESYIGVLVDDLIARGVQEPYRMFTSRAEYRLSLREDNADMRLTAIGRDLGLVDDYRWGVFCRKQEAVSRETSRLQNIWVGPKSEAAPFVSQLLDQDLSHESSLAELLRRPGVTYESIIALGDGMWAPETLDEDLGLAAQISDQVEISVKYQGYIERQATEIARQEHNETLLLPESLDYSQVIGLSKEVQQKLNLHKPETLGQAGRISGVTPAALSLLLVHLKKDLGHTQEAHE

Annotated regions:
phrase: VKYQGYIERQATEIARQEHNETLLLPESLDYSQVIGLSKEVQQKLNLHKPETLGQAGRISGVTPAALSLLL
type: DOMAIN
name: MnmG_C_subdom
description: tRNA uridine 5-carboxymethylaminomethyl modification enzyme, C-terminal subdomain

phrase: DYRWGVFCRKQEAVSRETSRLQNIWVGPKSEAAPFVSQLLDQDLSHESSLAELLRRPGVTYESIIALGDGMWAPETLDEDLGLAAQISDQVEISVKYQGYIER
type: DOMAIN
name: GIDA_C_N
description: tRNA uridine 5-carboxymethylaminomethyl modification enzyme, C-terminal, N-terninal subdomain

phrase: GPRYCPSIEDKIHR
type: CONSERVED_SITE
name: MnmG-rel_CS
description: MnmG-related, conserved site

phrase: AGQINGTTGYEEAAAQGMLAGIN
type: CONSERVED_SITE
name: MnmG-rel_CS
description: MnmG-related, conserved site

phrase: DVIVVGGGHAGTEAALASARMGCDTLLITHSIENLGAMSCNPSIGGIGKGHLVKEIDAMGGAMAAATDEAGIQFRILNSSKGPAVRATRAQGDRVLYKAAIRRRLENQPNLSLFQAAVDDLPVKGDEVQGVVTQMGLEFMAKKVVLTAGTFLDGKIHVGLNNYAGGRAGDPAAVSLSARLKELKLPQGRLKTGTPPRIDGLTIDFSVMLEQPGDLDPVPVFSYLGRPEQHPKQVPCWISHTNEKTHDIIRGGLDRSPMYTGVIKGVGPRYCPSIEDKIHRFASRNSHQIFLEPEGLTTNEFYPNGISTSLPFDVQWDLVRSIRGMESAVIVRPGYAIEYDFFDPRQLRHSLETKVIGGLYFAGQINGTTGYEEAAAQGMLAGINAGLAAKGK
type: DOMAIN
name: MnmG_N
description: MnmG, N-terminal domain

phrase: RQEHNETLLLPESLDYSQVIGLSKEVQQKLNLHKPETLGQAGRISGVTPAALSLL
type: DOMAIN
name: MnmG_C
description: tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG, C-terminal
Protein sequence:
MGLGFLRLALPLLMVAASAPAVAIPRLDLSGYPAPKQGLKRWVIQPSGLLPKSDDALISPHPLDWRVQLIVGKEVEMDCNVKRLSGPSLSMQRLPQASGKALFEVSGPVLVLSTRMACNSEQAKGKSFLSLGKQPYLIPYNASWPVVVDLPDGVELRWRVWKAETRQQEAVRL

Annotated regions: