nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MRMDTLDSQAADAAQEEEIQRKLEELVTLAKDQGFITYEEINEILPPSFDSPEQIDQVLIFLAGMDVQVLNQADVERQKERKKEAKELEGLAKRSEGTPDDPVRMYLKEMGTVPLLTREEEVEISKRIEKAQVQIERIILRFRYSTKEAVSIAQYLINGKERFDKIVSEKEVEDKTHFLNLLPKLISLLKEEDSYLEERLLALKDPALSKQDQAKLNDELEKCRIRTQAYLRCFHCRHNVTEDFGEVVFKAYDSFLQLEQQINDLKVRAERNKFAAAKLAAARRKLYKREVAAGRTLEEFKKDVRMLQRWMDKSQEAKKEMVESNLRLVISIAKKYTNRGLSFLDLIQEGNMGLMKAVEKFEYRRGYKFSTYATWWIRQAVTRAIADQARTIRIPVHMIETINKVLRGAKKLMMETGKEPTPEELGEELGFTPDRVREIYKIAQHPISLQAEVGDSGESSFGDFLEDTAVESPAEATGYSMLKDKMKEVLKTLTDRERFVLIHRFGLLDGRPKTLEEVGSAFNVTRERIRQIEAKALRKMRHPIRSKQLRAFLDLLEEEKTGSGKIKSYKN

Annotated regions:
phrase: AKKEMVESNLRLVISIAKKYTNRGLSFLDLIQEGNMGLMKAVEKFEYRRGYKFSTYATWWIRQAVTRAIADQARTIRIPVHMIETINKVLRGAKKLMMETGKEPTPEELGEELGFTPDRVREIYKIAQHPISLQAEVGDSGESSFGDFLEDTAVESPAEATGYSMLKDKMKEVLKTLTDRERFVLIHRFGLLDGRPKTLEEVGSAFNVTRERIRQIEAKALRKMR
type: DOMAIN
name: RNA_pol_sigma-70_dom
description: RNA polymerase sigma-70-like domain

phrase: DLIQEGNMGLMKA
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: IQRKLEELVTLAKDQGFITYEEINEILPPSFDSPEQIDQVLIFLAGMDVQVLNQADVERQKERKKEA
type: DOMAIN
name: RNA_pol_sigma_70_r1_1
description: RNA polymerase sigma factor 70, region 1.1

phrase: TLEEVGSAFNVTRERIRQIEAKALRK
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: MVESNLRLVISIAKKYTNRGLSFLDLIQEGNMGLMKAVEKFEYRRGYKFSTYATWWIRQAVTRAIADQAR
type: DOMAIN
name: RNA_pol_sigma70_r2
description: RNA polymerase sigma-70 region 2

phrase: DLIQEGNMGLMKA
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: FSTYATWW
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: LTDRERFVLIHR
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: TLEEVGSAFNVTRER
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: IRQIEAKALRK
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: ETINKVLRGAKKLMMETGKEPTPEELGEELGFTPDRVREIYKIAQHPISLQAEVGDSGESSFGDFLEDTAVESPAE
type: DOMAIN
name: RNA_pol_sigma70_r3
description: RNA polymerase sigma-70 region 3

phrase: AKKEMVESNLRLVISIAKKYTNRGLSFLDLIQEGNMGLMKAVEKFEYRRGYKFSTYATWWIRQAVTRAIADQARTIRIPVHMIETINKVLRGAKKLMMETGKEPTPEELGEELGFTPDRVREIYKIAQHPISLQAEVGDSGESSFGDFLEDTAVESPAEATGYSMLKDKMKEVLKTLTDRERFVLIHRFGLLDGRPKTLEEVGSAFNVTRERIRQIEAKALRKMRHPIRSKQLRAF
type: DOMAIN
name: RNA_pol_sigma_RpoD_C
description: RNA polymerase sigma factor RpoD, C-terminal

phrase: DPVRMYLKEMGTVPLLTREEEVEISKRIE
type: DOMAIN
name: RNA_pol_sigma70_r1_2
description: RNA polymerase sigma-70 region 1.2

phrase: VLKTLTDRERFVLIHRFGLLDGRPKTLEEVGSAFNVTRERIRQIEAKALRKMR
type: DOMAIN
name: RNA_pol_sigma70_r4
description: RNA polymerase sigma-70 region 4
Protein sequence:
MSNEREMQNKKDQQLESFRVEDEGKKLTTNQGLKVSEDEFSLKAGERGPTLMEDFHFREKMTHFDHERIPERIVHARGFAAHGEFQVYDSMKEFTKAKFLQDPSVKTPVFVRFSTVAGSKGSAETVRDARGFATKFYTEEGNYDLVGNNIPVFFIQDAIKFPDLVHALKPEPHNEIPQAQSAHDTFWDFIANNQESAHMVMWAMSDRSIPRSFRMMEGFGVHTFRFVNEEGKAHFVKFHWKPVLGIHSLVWDEAQKIAGKDPDFHRRDLWESIENGDYPEYELGVQLISEEDEFNFDFDVLDPTKIWPEEEVPVKIIGKMTLNRNVDNVFAETEQVAFHPGHVVPGIDFTNDPLLQGRLFSYTDTQLIRLGGPNFHELPINRPVCPFHNNQRDGYGRQTINKGQVSYHKNSLAANTPQPASEEEGGYAHYQEKVEGRKVRKRSESFKDHFSQAKLFWNSMSEVEKNHIIEAFSFELGKVQSKSVQQQVVEMFAHVTSDLAKPVAEAIGANLPQSEGSSVTKSSLALSQENTIKKPDTRKVGVIIDNGFNGDEVKQVLNELQSKGIQAEFISDKLGIKKCAGGSEIEIDHTFLTGESVLFDALYVVGGKEVDPSFKDDAVYFIKEAYAHFKPIGATHVGIKWLEEQEIVEKEGVVTGTDMNIFSQNLTGAVMEHRHWNR

Annotated regions:
phrase: TRKVGVIIDNGFNGDEVKQVLNELQSKGIQAEFISDKLGIKKCAGGSEIEIDHTFLTGESVLFDALYVVGGKEVDPSFKDDAVYFIKEAYAHFKPIGATHVGIKWLEEQEIVEKEGVVTGTDMNIFSQNLTGAVMEH
type: DOMAIN
name: Catalase_large_C
description: Large catalase, C-terminal domain

phrase: DTRKVGVIIDNGFNGDEVKQVLNELQSKGIQAEFISDKLGIKKCAGGSEIEIDHTFLTGESVLFDALYVVGGKEVDPSFKDDAVYFIKEAYAHFKPIGATHVGIKWLEEQEIVEKEGVVTGTDMNIFSQNLTGAVMEHRHWN
type: DOMAIN
name: Catalase_large_C
description: Large catalase, C-terminal domain

phrase: TTNQGLKVSEDEFSLKAGERGPTLMEDFHFREKMTHFDHERIPERIVHARGFAAHGEFQVYDSMKEFTKAKFLQDPSVKTPVFVRFSTVAGSKGSAETVRDARGFATKFYTEEGNYDLVGNNIPVFFIQDAIKFPDLVHALKPEPHNEIPQAQSAHDTFWDFIANNQESAHMVMWAMSDRSIPRSFRMMEGFGVHTFRFVNEEGKAHFVKFHWKPVLGIHSLVWDEAQKIAGKDPDFHRRDLWESIENGDYPEYELGVQLISEEDEFNFDFDVLDPTKIWPEEEVPVKIIGKMTLNRNVDNVFAETEQVAFHPGHVVPGIDFTNDPLLQGRLFSYTDTQLIRLGGPNFHELPINRPVCPFHNNQRDGYGRQTINKGQVSYHKNS
type: DOMAIN
name: Catalase_core
description: Catalase core domain

phrase: FDHERIPERIVHARGF
type: ACTIVE_SITE
name: Catalase_AS
description: Catalase active site

phrase: SESFKDHFSQAKLFWNSMSEVEKNHIIEAFSFELGKVQSKSVQQQVVEMFAHVTSDLAKPVAEA
type: DOMAIN
name: Catalase_immune_responsive
description: Catalase immune-responsive domain

phrase: TTNQGLKVSEDEFSLKAGERGPTLMEDFHFREKMTHFDHERIPERIVHARGFAAHGEFQVYDSMKEFTKAKFLQDPSVKTPVFVRFSTVAGSKGSAETVRDARGFATKFYTEEGNYDLVGNNIPVFFIQDAIKFPDLVHALKPEPHNEIPQAQSAHDTFWDFIANNQESAHMVMWAMSDRSIPRSFRMMEGFGVHTFRFVNEEGKAHFVKFHWKPVLGIHSLVWDEAQKIAGKDPDFHRRDLWESIENGDYPEYELGVQLISEEDEFNFDFDVLDPTKIWPEEEVPVKIIGKMTLNRNVDNVFAETEQVAFHPGHVVPGIDFTNDPLLQGRLFSYTDTQLIRLGGPNFHELPINRPVCPFHNNQRDGYGRQTINKGQVSYHKNSLAAN
type: DOMAIN
name: Catalase_core
description: Catalase core domain

phrase: RLFSYTDT
type: BINDING_SITE
name: Catalase_haem_BS
description: Catalase haem-binding site
Protein sequence:
MMRNVLLLCGGGSSEHEISLLSSEYLQQQLGLIENVNVLKVEIKNEGWFDQKERLVYLDIHTKSVKSDEFNESIDIDFIVPCIHGFPGETGDIQSLFELAGIPYLGCGPEASSNSFNKITSKLWYDAIGIPNTPYLFLTENNEESHQLSREAFDKWGKLFVKAARQGSSVGCYSVTNIEQLSDAIDKAFGFSHQVLVEKAVKPRELEVSAYEMNGQLHISKPGEIIAPDGAFYSYDEKYSAGSHSITEVEAKNLTEQQLATIQLCSEKVFRQMNLRHLSRIDFFLTSEGEIYLNEVNTFPGMTKISMFPKMLQHNGHKFHEFLADCIERSL

Annotated regions:
phrase: MNLRHLSRIDFFLTSEGEIYLNEVNTFP
type: CONSERVED_SITE
name: D-Ala_lig_Van_CS
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site

phrase: HGFPGETGDIQ
type: CONSERVED_SITE
name: D-Ala_lig_Van_CS
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site

phrase: KLWYDAIGIPNTPYLFLTENNEESHQLSREAFDKWGKLFVKAARQGSSVGCYSVTNIEQLSDAIDKAFGFSHQVLVEKAVKPRELEVSAYEMNGQLHISKPGEIIAPDGAFYSYDEKYSAGSHSITEVEAKNLTEQQLATIQLCSEKVFRQMNLRHLSRIDFFLTSEGEIYLNEVNTFPGMTKISMFPKMLQHNGHKFHEFLADCI
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold

phrase: AIGIPNTPYLFLTENNEESHQLSREAFDKWGKLFVKAARQGSSVGCYSVTNIEQLSDAIDKAFGFSHQVLVEKAVKPRELEVSAYEMNGQLHISKPGEIIAPDGAFYSYDEKYSAGSHSITEVEAKNLTEQQLATIQLCSEKVFRQMNLRHLSRIDFFLTSEGEIYLNEVNTFPGMTKISMFPKMLQHNGHKFHEFLADC
type: DOMAIN
name: Dala_Dala_lig_C
description: D-alanine--D-alanine ligase, C-terminal

phrase: NVLLLCGGGSSEHEISLLSSEYLQQQLGLIENVNVLKVEIKNEGWFDQKERLVYLDIHTKSVKSDEFNESIDIDFIVPCIHGFPGETGDIQSLFELAGIPYLG
type: DOMAIN
name: Dala_Dala_lig_N
description: D-alanine--D-alanine ligase, N-terminal domain
Protein sequence:
MMEQYYEIKKQYPDAFLFYRVGDFYELFEDDAVKGAQILELTLTHRSNKTKNPIPMAGVPHMAVDTYVNTLVEKGYKVALCEQLEDPKKAKGMVKRGIIQLVTPGTMMNEGPNDAKDSNYLTSVVTTKSGFGLAYSDLSTGEIYSTHLKSFAAVSNELLSLRTREVVYNGPLTEQSKDFMHKANITVSAPTPIEGEHAEISYVEQNLTNGAEKSATRQLVGYLLSTQKRSLAHLQIAKSYEVNQYLQMSHTVQNNLELVASAKTGKKMGSLFWVLDKTHTAMGGRLLKQWLARPLLNVDIINHREKMVQALLDGYFTRENTIDALKGVYDLERLTGRIAFGNVNARELLQLSRSLQAVPVILDALNQSDSDVLTDFAKKIDPLKGVAELISTTLVKDPPLLTTEGGLIRDGVDKQLDRYRDAMNNGKKWLVQMETDERQKTGIENLKVGFNKVFGYYIQVSNGNKSKVPLDRYTRKQTLTNAERYITPELKEHENLILEAQTRSTDLEYDLFVQLRDEVKKYIPALQKLGNQLAALDVYCGFATVAEQNNYCRPSFHTDSQDIDVVNGRHPVVEKVMTAGSYIPNDVKMDSATNIFLITGPNMSGKSTYMRQMALIAIMAQVGSFVPADSAALPIFDQIFTRIGAADDLISGQSTFMVEMSEANAALQYATKRSLVLFDEIGRGTATYDGMALAGAIVKYLHDKVGAKALFATHYHELTSLDETLDYLKNIHVGATEENGKLIFLHKILPGPADQSYGIHVAQLAGLPRAVLREATKLLKRLEAQGSELAPVSQQLDLFAQPEAASDEVDDNNSENSPMTDAEQEVLDDISNLYLADKTPLQIMQMVANWQKDLKDDK

Annotated regions:
phrase: GVDKQLDRYRDAMNNGKKWLVQMETDERQKTGIENLKVGFNKVFGYYIQVSNGNKSKVPLDRYTRKQTLTNAERYITPELKEHENLILEAQT
type: DOMAIN
name: DNA_mismatch_repair_MutS_clamp
description: DNA mismatch repair protein MutS, clamp

phrase: TNIFLITGPNMSGKSTYMRQMALIAIMAQVGSFVPADSAALPIFDQIFTRIGAADDLISGQSTFMVEMSEANAALQYATKRSLVLFDEIGRGTATYDGMALAGAIVKYLHDKVGAKALFATHYHELTSLDETLDYLKNIHVGATEENGKLIFLHKILPGPADQSYGIHVAQLAGLPRAVLREATKLL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: NNLELVASAKTGKKMGSLFWVLDKTHTAMGGRLLKQWLARPLLNVDIINHREKMVQALLDGYFTRENTIDALKGVYDLERLTGRIAFGNVNARELLQLSRSLQAVPVILDALNQSDSDVLTDFAKKIDPLKGVAELISTTLVKDPPLLTTEGGLIRDGVDKQLDRYRDAMNNGKKWLVQMETDERQKTGIENLKVGFNKVFGYYIQVSNGNKSKVPLDRYTRKQTLTNAERYITPELKEHENLILEAQTRSTDLEYDLFVQLRDEVKKYIPALQKLGNQLAALDVYCGF
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: SLVLFDEIGRGTATYD
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: KKMGSLFWVLDKTHTAMGGRLLKQWLARPLLNVDIINHREKMVQALLDGYFTRENTIDALKGVYDLERLTGRIAFGNVNARELLQLSRSLQAVPVILDALNQSDSDVLTDFAKKIDPLKGVAELISTTLVKDPPLLTTEGGLIRDGVDKQLDRYRDAMNNGKKWLVQMETDERQKTGIENLKVGFNKVFGYYIQVSNGNKSKVPLDRYTRKQTLTNAERYITPELKEHENLILEAQTRSTDLEYDLFVQLRDEVKKYIPALQKLGNQLAALDVYCGFATVAEQNNYCRPSFHTDSQDIDVVNGRHPVVEK
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: LITGPNMSGKSTYMRQMALIAIMAQVGSFVPADSAALPIFDQIFTRIGAADDLISGQSTFMVEMSEANAALQYATKRSLVLFDEIGRGTATYDGMALAGAIVKYLHDKVGAKALFATHYHELTSLDETLDYLKNIHVGATEENGKLIFLHKILPGPADQSYGIHVAQLAGLPRAVLREATKLLKRL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: NYLTSVVTTKSGFGLAYSDLSTGEIYSTHLKSFAAVSNELLSLRTREVVYNGPLTEQSKDFMHKANITVSAPTPIEGEHAEISYVEQNLTNGAEKSATRQLVGYLLSTQKRSLAHL
type: DOMAIN
name: DNA_mmatch_repair_MutS_con_dom
description: DNA mismatch repair protein MutS, connector domain

phrase: MMEQYYEIKKQYPDAFLFYRVGDFYELFEDDAVKGAQILELTLTHRSNKTKNPIPMAGVPHMAVDTYVNTLVEKGYKVALCEQLEDPKKAKGMVKRGIIQLVTPGTMMN
type: DOMAIN
name: DNA_mismatch_repair_MutS-lik_N
description: DNA mismatch repair protein MutS-like, N-terminal
Protein sequence:
MDYANRHVTVVGLGGSGLAAARYLAAHGARVRVADANPSAERLAELERCLPGVEVMVGAFDDATFAGAELLVVSPGVPLANPAIAAFRRAGGEVVGDIEILARAIQGDGSKVIAITGSNGKSTVTSLVGHLCEAAGLDTVVAGNIGLAVLEALLAREQSGKRPDVWVLELSSFQLESTFSLAADAATVLNISEDHLDRYADLLDYAHAKTRVFNGKGVQVLNKDDALVRAMVRPGHPVKWFSLNGAADYALARNGGYWLKVDGEKVFDCADMQLQGLHNAANALAALGLCQGIGLPLEKLLDGLKTFRGLAHRVELVDEFDGIAFIDDSKGTNVGATEAALNGMTRQVVLIAGGDGKGQDFAPLKPACQRIARAVLLIGRDAGRIEAALEDSGLALERCDTLEEATRRAAALARPGDVVLLSPACASLDMFKNYAHRAQVFIDTVAAVKAARA

Annotated regions:
phrase: HRVELVDEFDGIAFIDDSKGTNVGATEAALNGMTRQVVLIAGGDGKGQDFAPLKPACQRIARAVLLIGRDAGRIEAALEDSGLALERCDTLEEATRRAAALARPGDVVLLSPA
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: ITGSNGKSTVTSLVGHLCEAAGLDTVVAGNIGLAVLEALLAREQSGKRPDVWVLELSSFQLESTFSLAADAATVLNISEDHLDRYADLLDYAHAKTRVFNGKGVQVLNKDDALVRAMVRPGHPVKWFSLNGAADYALARNGGYWLKVDGEKVFDCADMQLQGLHNAANALAALG
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central
Protein sequence:
MTKGILGRKIGMTQVFAENGELIPVTVIAANPNVVLQKKTTETDGYNAIQLGFEDKREKLTNKPEQGHTAKASTTPKRFIREIRDADVDGLEVGQEVKVDVFATGEIVDVTGISKGKGFQGVIKRHGQSRGPMSHGSRYHRRPGSMGPVAPNRVFKGKKLAGRMGGDQVTIQNLEIVQVDTERNLLLVKGNVPGAKKSLVVVQGAVKVTQ

Annotated regions:
phrase: FATGEIVDVTGISKGKGFQGVIK
type: CONSERVED_SITE
name: Ribosomal_uL3_CS
description: Large ribosomal subunit protein uL3, conserved site
Protein sequence:
MTDPLIHTRKVMGFVRDPLPTTGALSLKSTNARADLEWLGWRNVESIPLMWALSGAGDPDVALNQLVRMYQTLESQSPQAREELDQRIRADEAFRVRLLALLGGSSAMGDHLVANTHLWELLTEEAPTRAEMFTAMLESVGATPAEVVPVDDEGEERQVANTATEDLTTPGTYRATLTGVDAERALRFTYRTLMMRLAALDLAGTYPNDARRRSQPRVEFTTVTRRLSNLADAALTAALAVAVTGVYGQKPVDARLSVMAMGKCGAQELNYISDVDVIFIAEPAHSRSTRLAAEFIRTGCSSFFEVDAALRPEGKSGALVRTLESHIAYYKRWAETWEFQALLKARPMTGDMDLGQAYLDAIGPMVWTASQRDSFVDDIQAMRRRVLENVPEELRDRELKLGRGGLRDVEFAVQLLQMVHGRYDETLRVRSTVEALQVLVDQGYIGREDGHNLIESYEFLRLLEHRLQLERVKRTHTMPKVEDRMNMRWLARASGFTGSGGQSSARAMEHHLRRVRLQIQSLHSQLFYRPLLNSVVNLSVDAMKLSQEAAKLQLGALGYQHPVRAYEHLTALASGTSRKAKIQAMLLPTLMEWLSQTADPDAGLLNYRKLSDAAYDRSWFLRMLRDEGVVGQRLMRILGTSPYTSELIIATPDFVSELGDGTTGPKLLETAPDRVCKALKATVARHDDPDRAIQAARSLRRQELARVASADLLNLLTVQEVCHSLSLVWDAVLDAALEAEIRAATADPAKPDEPLAAISVIGMGRLGG

Annotated regions:
phrase: RVEFTTVTRRLSNLADAALTAALAVAVTGVYGQKPVDARLSVMAMGKCGAQELNYISDVDVIFIAEPAHSRSTRLAAEFIRTGCSSFFEVDAALRPEGKSGALVRTLESHIAYYKRWAETWEFQALLKARPMTGDMDLGQAY
type: DOMAIN
name: GlnE_rpt_dom
description: Glutamate-ammonia ligase adenylyltransferase, repeated domain

phrase: QRLMRILGTSPYTSELIIATPDFVSELGDGTTGPKLLETAPDRVCKALKATVARHDDPDRAIQAARSLRRQELARVASADLLNLLTVQEVCHSLSLVWDAVLDAALEAEIRAATADPAKPDEPLAAISVIGMGRLG
type: DOMAIN
name: GlnE_rpt_dom
description: Glutamate-ammonia ligase adenylyltransferase, repeated domain

phrase: AMRRRVLENVPEELRDRELKLGRGGLRDVEFAVQLLQMVHGRYDETLRVRSTVEALQVLVDQGYIGREDGHNLIESYEFLRLLEHRLQLERVKRTHTMPKVEDRMNMRWLARASGFTGSGGQSSARAMEHHLRRVRLQIQSLHSQL
type: DOMAIN
name: PII_UdlTrfase/GS_AdlTrfase
description: PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase
Protein sequence:
MRVRGILRNWQPWWIWVILGFWMVYNVVGNLWVTIYYGVPVWRDANTTLFCASDAKTYEKEVHNVWATHACVPTDPSPHEVVLENVTENFNMWKNDMVEQMHKDIISLWDQSLKPCVKLTPLCVTLTCEDAGKRTASVNSTINGTTTSTPVSSTTMTTTMEEVPMKNCSFNATTEIQDKKKKERALFYRSDIVQLGGNSSQGNSSQYILINCNTSTVTQACPKISFDPIPIHYCAPAGYAILKCNNKTFNGTGPCQNVSTVQCTHGIKPVVSTQLLLNGSLAEGDVMIRSENLTNNAKTIIVQLNKSVDIVCVRPNNNTRKSIRIGPGQTFYATGDIIGDIRQAYCNISGAEWNRTLQNVKEALKKHFPKNITFEHSSGGDPEITTHSFNCGGEFFYCNTTQLFNTTRLFNTTRPFNATAKENITLPCRIKQIINMWQEVGKAIYAPPIAGNITCISNITGLLLTRDGGNNNNTTEIFRPGGGDMRDNWRSELYKYKVVEIKPLGIAPTGAKRRVVEKQKRAVGMGAVLLGFLGAAGSTMGAASVALTVQARQLLSGIVQQQSNLLMAIEAQQHMLQLTVWGIKQLQARVLAIERYLKDQQLLGLWGCSGKTICTTNVPWNSSWSNKSQSDIWDNMTWMQWDREINNYTNTIYKLLEESQSQQEINEKKLLELGDWDSLWNWFSISRWLWYIKIFIMIVGGLIGLRIVFAVLSIVNRVRQGYSPLSFQTLTPNPRGPDRPERIEEGGGEQDKDRSIRLVSGFLALAWD

Annotated regions:
phrase: MGAASVALTVQARQLLSGIVQQQSNLLMAIEAQQHMLQLTVWGIKQLQARVLAIERYLKDQQLLGLWGCSGKTICTTNVPWNSSWSNKSQSDIWDNMTWMQWDREINNYTNTIYKLLEESQSQQEINEKKLLELGDWDSLWNWFSISRWLWYIKIFIMIVGGLIGLRIVFAVLSIVNRVRQGYSPLSFQT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: VQARQLLSGIVQQQSNLLMAIEAQQHMLQLTVWGIKQLQARVLAIERYLKDQQLLGLWGCSGKTICTTNVPWNSSWSNKSQSDIWDNMTWMQWDREINNYTNTIYKLLEESQSQQEINEKKLLE
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTIYYGVPVWRDANTTLFCASDAKTYEKEVHNVWATHACVPTDPSPHEVVLENVTENFNMWKNDMVEQMHKDIISLWDQSLKPCVKLTPLCVTLTCEDAGKRTASVNSTINGTTTSTPVSSTTMTTTMEEVPMKNCSFNATTEIQDKKKKERALFYRSDIVQLGGNSSQGNSSQYILINCNTSTVTQACPKISFDPIPIHYCAPAGYAILKCNNKTFNGTGPCQNVSTVQCTHGIKPVVSTQLLLNGSLAEGDVMIRSENLTNNAKTIIVQLNKSVDIVCVRPNNNTRKSIRIGPGQTFYATGDIIGDIRQAYCNISGAEWNRTLQNVKEALKKHFPKNITFEHSSGGDPEITTHSFNCGGEFFYCNTTQLFNTTRLFNTTRPFNATAKENITLPCRIKQIINMWQEVGKAIYAPPIAGNITCISNITGLLLTRDGGNNNNTTEIFRPGGGDMRDNWRSELYKYKVVEIKPLGIAPTGAKRRVVEKQK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MVRCLWAAECCWLPPKRKQPFEDTMYTTYVARQPILNAKRHTLGYELLFRDGEKNAFPEYMDADRATYRLIVENFLSLGTNPRIARSRCFINFPHKSLIRRLPLTLPREQIVVEILETCQPTDDLFEAVQELSQRGYLLALDDFVYSPAWERFLPYVQIVKIDIMAMGLDKACEFVRGRLAQGSRRRFLAERVETEDEFHQARHAGFTFFQGYFFSKPEIIKQRYVSPEHVIAMQLFREVCQPEVDYVRVERLVAQDIALSYKLLRFVNTMSDRISVSISSFRQALVYLGQDKLRIFVSLAVASYISSKKPKELYNLSLQRAQFCQLMATHTHFKAHREQAFLIGMFSVLDALLDTSIEQLVEQLPLADDVKLALREREGPLGTLLDLEECFEKADWQGVEQHCLELGFDLEDVRQELIEAQRWSQDINRLI

Annotated regions:
phrase: HKSLIRRLPLTLPREQIVVEILETCQPTDDLFEAVQELSQRGYLLALDDFVYSPAWERFLPYVQIVKIDIMAMGLDKACEFVRGRLAQGSRRRFLAERVETEDEFHQARHAGFTFFQGYFFSK
type: DOMAIN
name: EAL_dom
description: EAL domain

phrase: VSPEHVIAMQLFREVCQPEVDYVRVERLVAQDIALSYKLLRFVNTMSDRISVSISSFRQALVYLGQDKLRIFVSLAVASYISSKKPKELYNLSLQRAQFCQLMATHTHFKAHREQAFLIGMFSVLDALLDTSIEQLVEQLPLADDVKLALREREGPLGTLLDLEECFEKADWQGVEQHCLELGFDLE
type: DOMAIN
name: HDOD
description: Metal-dependent hydrolase HDOD

phrase: MVRCLWAAECCWLPPKRKQPFEDTMYTTYVARQPILNAKRHTLGYELLFRDGEKNAFPEYMDADRATYRLIVENFLSLGTNPRIARSRCFINFPHKSLIRRLPLTLPREQIVVEILETCQPTDDLFEAVQELSQRGYLLALDDFVYSPAWERFLPYVQIVKIDIMAMGLDKACEFVRGRLAQGSRRRFLAERVETEDEFHQARHAGFTFFQGYFFSKPEIIKQRYVSPEHV
type: DOMAIN
name: EAL_dom
description: EAL domain

phrase: IAMQLFREVCQPEVDYVRVERLVAQDIALSYKLLRFVNTMSDRISVSISSFRQALVYLGQDKLRIFVSLAVASYISSKKPKELYNLSLQRAQFCQLMATHTHFKAHREQAFLIGMF
type: DOMAIN
name: HDOD
description: Metal-dependent hydrolase HDOD

phrase: RKQPFEDTMYTTYVARQPILNAKRHTLGYELLFRDGEKNAFPEYMDADRATYRLIVENFLSLGTNPRIARSRCFINFPHKSLIRRLPLTLPREQIVVEILETCQPTDDLFEAVQELSQRGYLLALDDFVYSPAWERFLPYVQIVKIDIMAMGLDKACEFVRGRLAQGSRRRFLAERVETEDEFHQARHAGFTFFQGYFFSKPEIIK
type: DOMAIN
name: EAL_dom
description: EAL domain
Protein sequence:
MESKLSFESFFYNESKKAYFQKLMEKLDEEYEKYQVFPNKKDLFRAIELTNFATLKIVIIGQDPYHRKGQADGLAFSTRTKILPPSLRNLFLEIKNAYPNFSKENGNLENWAKQGVLLLNHVLTVRKSSPNSHKNIGWEVFSSNLINFIVKNKVDIVFLLLGKKAKLAVKNINLEKQKVFAYSHPSPFSFAKSLKNSMVFRKINDFLKEKKRLEINWNL

Annotated regions:
phrase: ELTNFATLKIVIIGQDPYHRKGQADGLAFSTRTKILPPSLRNLFLEIKNAYPNFSKENGNLENWAKQGVLLLNHVLTVRKSSPNSHKNIGWEVFSSNLINFIVKNKVDIVFLLLGKKAKLAVKNINLEKQKVFAYSHPSPFSFAKSLKNSMVFRKINDF
type: DOMAIN
name: Uracil-DNA_glycosylase-like
description: Uracil-DNA glycosylase-like

phrase: KIVIIGQDP
type: ACTIVE_SITE
name: Ura-DNA_Glyclase_AS
description: Uracil-DNA glycosylase, active site

phrase: TLKIVIIGQDPYHRKGQADGLAFSTRTKILPPSLRNLFLEIKNAYPNFSKENGNLENWAKQGVLLLNHVLTVRKSSPNSHKNIGWEVFSSNLINFIVKNKVDIVFLLLGKKAKLAVKNINLEKQKVFAYSHPSPFSFAKSLKNSMVFRKINDFL
type: DOMAIN
name: Uracil-DNA_glycosylase-like
description: Uracil-DNA glycosylase-like
Protein sequence:
MTNTRKTHPLXKIINHSFIDLPAPSNISAWWNFGSLLGLCLIIQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGLYYGSYTYFETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVMIHLLFLHETGSNNPSGLISDSDKIPFHPYYTIKDILGILLLILTLMMLVLFSPDLLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIFSILILMLFPLLHLSKQRSMMFRPMSQCVFWILVADLLTLTWIGGQPVEHPFVIIGQLASILYFAIILLILPTVSMIENKLLKW

Annotated regions:
phrase: MTNTRKTHPLXKIINHSFIDLPAPSNISAWWNFGSLLGLCLIIQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGLYYGSYTYFETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVMIHLLFLHETGSNNP
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: PLXKIINHSFIDLPAPSNISAWWNFGSLLGLCLIIQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGLYYGSYTYFETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVMIHLLFLHETGS
type: DOMAIN
name: Cytochrome_b_N_euk/bac
description: Cytochrome b/b6, N-terminal domain, eukaryotic/bacterial

phrase: NPSGLISDSDKIPFHPYYTIKDILGILLLILTLMMLVLFSPDLLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIFSILILMLFPLLHLSKQRSMMFRPMSQCVFWILVADLLTLTWIGGQPVEHPFVIIGQL
type: DOMAIN
name: Cytochrome_b_C_euk/bac
description: Cytochrome b/b6, C-terminal domain, eukaryotic/bacterial

phrase: PANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIFSILILMLFPLLHLSKQRSMMFRPMSQCVFWILVADLLTLTWIGGQPVEHPFVIIGQLASILY
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: IDLPAPSNISAWWNFGSLLGLCLIIQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFLHVGRGLYYGSYTYFETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVMIHLLFLHET
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: GLISDSDKIPFHPYYTIKDILGILLLILTLMMLVLFSPDLLGDPDNYMPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALIFSILILMLFPLLHLSKQRSMMFRPMSQCVFWILVADLLTLTWIGGQPVEHPFVIIGQLASILYFAIILLILPTVSMIENKLLK
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal
Protein sequence:
MAPWGKRLAGVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQKSRAELVGQLQRLGFDISEQEVTAPAPAACQILKEQGLRPYLLIHDGVRSEFDQIDTSNPNCVVIADAGESFSYQNMNNAFQVLMELEKPVLISLGKGRYYKETSGLMLDVGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRCGMRALQVRTGKFRPSDEHHPEVKADGYVDNLAEAVDLLLQHADK

Annotated regions:
Protein sequence:
MFPSGLIERPANWVALAGFMGTGKSRIGWELSRALALHFVDTDKLITRVVGKSIPEVFAQEGEGYFRACEREVVQRVTRLDHAVISLGGGTFIHEENRRLLLSRGPVVVLWATPETVYQRTKHSDRPLLKVEDPLSRIRTLMNEREGVYRQGTIHVHSDGRPSEEIVEEVVERLWAWRDAQAAWAALPPDYDRATS

Annotated regions:
phrase: RACEREVVQRVTRLDHAVISLGGGT
type: CONSERVED_SITE
name: Shikimate_kinase_CS
description: Shikimate kinase, conserved site
Protein sequence:
MEAPEYLDLDEIDFSDDISYSVTSLKTIPELCRRCDTQNEDRSVSSSSWNCGISTLITNTQKPTGIADVYSKFRPVKRVSPLKHQPETLENNESDDQKNQKVVEYQKGGESDLGPQPQELGPGDGVGGPPGKSSEPSTSLGELEHYDLDMDEILDVPYIKSSQQLASFTKVTSEKRILGLCTTINGLSGKACSTGSSESSSSNMAPFCVLSPVKSPHLRKASAVIHDQHKLSTEETEISPPLVKCGSAYEPENQSKDFLNKTFSDPHGRKVEKTTPDCQLRAFHLQSSAAESKPEEQVSGLNRTSSQGPEERSEYLKKVKSILNIVKEGQISLLPHLAADNLDKIHDENGNNLLHIAASQGHAECLQHLTSLMGEDCLNERNTEKLTPAGLAIKNGQLECVRWMVSETEAIAELSCSKDFPSLIHYAGCYGQEKILLWLLQFMQEQGISLDEVDQDGNSAVHVASQHGYLGCIQTLVEYGANVTMQNHAGEKPSQSAERQGHTLCSRYLVVVETCMSLASQVVKLTKQLKEQTVERVTLQNQLQQFLEAQKSEGKSLPSSPSSPSSPASRKSQWKSPDADDDSVAKSKPGVQEGIQVLGSLSASSRARPKAKDEDSDKILRQLLGKEISENVCTQEKLSLEFQDAQASSRNSKKIPLEKRELKLARLRQLMQRSLSESDTDSNNSEDPKTTPVRKADRPRPQPIVESVESMDSAESLHLMIKKHTLASGGRRFPFSIKASKSLDGHSPSPTSESSEPDLESQYPGSGSIPPNQPSGDPQQPSPDSTAAQKVATSPKSALKSPSSKRRTSQNLKLRVTFEEPVVQMEQPSLELNGEKDKDKGRTLQRTSTSNESGDQLKRPFGAFRSIMETLSGNQNNNNNYQAANQLKTSTLPLTSLGRKTDAKGNPASSASKGKNKAA

Annotated regions:
phrase: DGNSAVHVASQHGYLGCIQTLVEYGANVTMQN
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: VETCMSLASQVVKLTKQLKEQTVERVTLQNQLQQFLEAQKSEG
type: DOMAIN
name: SNCAIP_SNCA-bd
description: Synphilin-1, alpha-Synuclein-binding domain

phrase: DGNSAVHVASQHGYLGCIQTLVEYGANVT
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: NGNNLLHIAASQGHAECLQHLTSLMGEDCL
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: DFPSLIHYAGCYGQEKILLWLLQFMQEQG
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: EKLTPAGLAIKNGQLECVRWMVSETEAIA
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: PSLIHYAGCYGQEKILLWLLQFMQEQGISLDEVDQDGNSAVHVASQHGYLGCIQTLVEYGANVTMQ
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: VKEGQISLLPHLAADNLDKIHDENGNNLLHIAASQGHAECLQHLTSLMGEDCLNERNTEKLTPAGLAIKNGQLECVRWMV
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat
Protein sequence:
MSAADAGQTVARVREALARHGITPRAVRADSRRVQPGDLFFALPGQRTDGRRFIDAAIAAGACAVLCEAGGAPAGTTVPVIEIDDLRAHAGALADALLDHPSAALHVIGITGTNGKTSVSQWVAQAMQALGTRCGVIGTLGCGLPGQLAESANTTPDVVSVHQTLADLRAAGATACAMEVSSIGLDQRRIDGVRIHTAAFTNLTRDHLDYHPDMQHYGAAKAALFSHPGLQAAVINTDDAFGRLLATATAARLPVTGCALDADLPSGVTGLRARNVDPAHGLHFDIEQGDARAVVDAALVGRFNVQNLLAVTGCLLHAGVSLSDAARVAGGLVPPPGRMQRLGGRGEPLVVVDYAHTPDALEQALRALQPVAAARGGRLLCVFGCGGDRDPGKRPLMGAVAYEHAARTWITSDNPRGEDPDAILDDIAAGLPTCADVQRERDRAVAIRAAVTGADPRDVVLIAGKGHEPYQEVAGARTPWSDADQAAAALAARGGVQ

Annotated regions:
phrase: ITGTNGKTSVSQWVAQAMQALGTRCGVIGTLGCGLPGQLAESANTTPDVVSVHQTLADLRAAGATACAMEVSSIGLDQRRIDGVRIHTAAFTNLTRDHLDYHPDMQHYGAAKAALFSHPGLQAAVINTDDAFGRLLATATAARLPVTGCALDADLPSGVTGLRARNVDPAHGLHFDIEQGDARAVVDAALVGRFNVQNLLAVTG
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRMQRLGGRGEPLVVVDYAHTPDALEQALRALQPVAAARGGRLLCVFGCGGDRDPGKRPLMGAVAYEHAARTWITSDNPRGEDPDAILDDIAAGLPTCADVQRERDRAVAIRAAVTGADPRDVVLIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: VRADSRRVQPGDLFFALPGQRTDGRRFIDAAIAAGACAVLCEAGGAPAGTTVPVIEIDDLRAHAGALA
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain
Protein sequence:
MNTFGNIYRLTSFGESHGPGIGGVIDGCPAGIELDTAFIQQELNRRKPGQSRITTPRKEDDEVQFLSGIYEGKTTGTPIGFIIWNKNQHSSDYDNMKTVYRPSHADYTYQTKYGIRDPRGGGRSSARETIARCVAGAIAKLALKQYGIQIQAYTSQVGPIKLAGSYQDYDLSLTEKSDVRCPDPKTASEMETLIAEVKSKGDTIGGVITCVAKGVPVGLGEPVFGKLHAALGHAMLTINAVKGFEYGDGFNAAFFRGSERNDRFFNDNGHINTRTNNSGGIQGGISNGQDIYFRVAFKSVATILMEQETVNMEGEDTILKARGRHDPCVLPRAVPIVESMTAMTLLDYLLIQKTRENF

Annotated regions:
phrase: RHDPCVLPRAVPIVES
type: CONSERVED_SITE
name: Chorismate_synthase_CS
description: Chorismate synthase, conserved site

phrase: GESHGPGIGGVIDGC
type: CONSERVED_SITE
name: Chorismate_synthase_CS
description: Chorismate synthase, conserved site