Protein sequence:
MSKKSVEIEDVNNTYDQEAHFALLDLFFEKDKQVLVKHHIDSFNQFIEEIIPNILQGGDNVISEKATENKIIRYRLTFNDLGIKPPTLENEENLLYPLDAIRKQISYSAKYTATVTQWQDIVDIDTKKTETRIIGSPEKDVPIAKIPIMVLSKYCNLTLRPDIAGKHCKYDAGGYFIVNGSEKVVLSVESMIPRKPVVFTQRDQNSLLYYVRVQSIPASQFVGNPQLFTVKMKRDNSIILSIPHFKEVSIFTFIRALGIETDEDIVDSILDVKKEKDLLNLLSICMNSSNTPSVTKEEALEIMANQIKSTKTFTDTNPEVKAEQRRRYLDKIMTQFVLPHITSGTGDPEIDKIYKAHYICYMIHKLLKCYLRGAREVEEYRGCDDRDSMVNKRIDLTGRLLGGLFKQFYDKMLNDCNKIFRTKNIDDKKPPNIIPHIKPNSIEQGLRQALSTGNFGSQSRKGLSQMLNRMNHLHSLSYMRRVITPTVDASTMKMTSPRHLHNTQYGSMCPLESPEGKPKTGLVKNMAMMEGITINMNSQIPIIESYLIGKITTLESANKKRLHQYVKVFLNGNWLGVTRNIIKIHNDLRAMRFRGELSRMVGLVLNYKTAEFHIYTDGGRLIRPYLTVTDNKLNFKPEMLDEVNSWEEFLAKFPEVIEYVDKEEEQNIMLAVFPQYIQDANRIMSKKPINSRDQLNKINRTNRYDDNVYVRYTHCEIHPCMILGLISSNIPFPDHNQSPRGIFQYNQARQAMGLYISDYRERTDISYILYHPQIPLVTSRASKYTGTHIFPAGENSIVAIASYTGLMNQEDSLVINDSAIQKGYMRAQALKKYMEIIKKNPASSQTSIFMKPDRNKVDNLRDANYDKLSEEGYAKVETVIRDGDVVIGVVNPKPTAREDEKQYKDASSIYKSLIPGAVDKVITEVNNDGYPIIKMRIRSERIPNVGDKFSSRAGQKGTIGYKAHRADMLFSKSGLIPDIIINPNCMPKRMTIGQLIECLLGKLCAVKGVYGDATPFTSVDLNAINDELVAAGYEEWGNETMYNGMNGKKLPVKIFIGPTYYQRLKQMVGDKAHSRARGPTQLLTRQAPEGRSRDGGLRIGFEMERDALCAHGVAQFLKEKTVDNSDIYTCHVCDSCGQFAHKVPEKKYYTCTGCRNTTSISKIVIPYAFKLLLQELASINILGKIRTSKTIATPRG

Annotated regions:
phrase: QLFTVKMKRDNSIILSIPHFKEVSIFTFIRALGIETDEDIVDSILDVKKEKDLLNLLSICMNSSNTPSVTKEEALEIMANQIKSTKTFTDTNPEVKAEQRRRYLDKIMTQFVLPHITSGTGDPEIDKIYKAHYICYMIHKLLKCYLRGAREVEEYRGCDDRDSMVNKRI
type: DOMAIN
name: RNA_pol_Rpb2_2
description: RNA polymerase Rpb2, domain 2

phrase: GGLRIGFEMERDALCAHGVAQFLKEKTVDNSDIYTCHVCDSCGQFAHKVPEKKYYTCTGCRNTTSISKIVIPYAFKLLLQELASINILG
type: DOMAIN
name: RNA_pol_Rpb2_7
description: RNA polymerase Rpb2, domain 7

phrase: SSNIPFPDHNQSPRGIFQYNQARQAMGLYISDYRERTDISYILYHPQIPLVTSRASKYTGTHIFPAGENSIVAIASYTGLMNQEDSLVINDSAIQKGYMRAQALKKYMEIIKKNPASSQTSIFMKPDRNKVDNLRDANYDKLSEEGYAKVETVIRDGDVVIGVVNPKPTAREDEKQYKDASSIYKSLIPGAVDKVITEVNNDGYPIIKMRIRSERIPNVGDKFSSRAGQKGTIGYKAHRADMLFSKSGLIPDIIINPNCMPKRMTIGQLIECLLGKLCAVKGVYGDATPFTSVDLNAINDELVAAGYEEWGNETMYNGMNGKKLPVKIFIGPTYYQRLKQMVGDKAHSRARGPTQLLTRQAPEGRS
type: DOMAIN
name: DNA-dir_RNAP_su2_dom
description: DNA-directed RNA polymerase, subunit 2, hybrid-binding domain

phrase: VFLNGNWLGVTRNIIKIHNDLRAMRFRGELSRMVGLVLNYKTAEFHIYTDGGRLIRPYLT
type: DOMAIN
name: RNA_pol_Rpb2_4
description: RNA polymerase Rpb2, domain 4

phrase: QMLNRMNHLHSLSYMRRVITPTVDASTMKMTSPRHLHNTQYGSMCPLESPEGKPKTGLVKNMAM
type: DOMAIN
name: RNA_pol_Rpb2_3
description: RNA polymerase Rpb2, domain 3

phrase: GDKFSSRAGQKG
type: CONSERVED_SITE
name: RNA_pol_bsu_CS
description: RNA polymerase, beta subunit, conserved site

phrase: WEEFLAKFPEVIEYVDKEEEQNIMLAVFPQYIQDANRIMSKKPINSRDQLNKINRTNRYDDNVYVRYTHCEIH
type: DOMAIN
name: RNA_pol_Rpb2_5
description: RNA polymerase Rpb2, domain 5

phrase: LVKHHIDSFNQFIEEIIPNILQGGDNVISEKATENKIIRYRLTFNDLGIKPPTLENEENLLYPLDAIRKQISYSAKYTATVTQWQDIVDIDTKKTETRIIGSPEKDVPIAKIPIMVLSKYCNLTLRPDIAGKHCKYDAGGYFIVNGSEKVVLSVESMIPRKPVVFTQRDQNSLLYYVRVQSIPASQFVGNPQLFTVKMKRDNSIILSIPHFKEVSIFTFIRALGIETDEDIVDSILDVKKEKDLLNLLSICMNSSNTPSVTKEEALEIMANQIKSTKTFTDTNPEVKAEQRRRYLDKIMTQFVLPHITSGTGDPEIDKIYKAHYICYMIHKLLKCYLRGAREVEEYRGCDDRDSMVNKRIDLTGRLLGGLFKQFYDKMLNDCNKIFRTKNID
type: DOMAIN
name: RNA_pol_bsu_protrusion
description: RNA polymerase, beta subunit, protrusion