nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSKFKSLLLLFGTLILLSGCSNIEIFNAKGPVASSQKFLILYSIVFMLVICFVVLGMFAIFIYKYSYNKNAESGKMHHNAIIETIWFVIPIIIVAALAIPTVKTLYDYEKPPKSEKDPMVVYAVSAGYKWFFAYPDEHIETVNTLTIPKDRPVVFKLQAMDTMTSFWIPQLGGQKYAMTGMTMNWTLEASQTGTFRGRNSNFNGEGFSRQTFKVNAVSQKDYDKWVKEVKGKKTLDQDTFDKQLLPSTPNKALEFNGTHMAFVDPAADPEYIFYAYKRFNFELKDPNFTSEENMFKDVSEKPLIPARKAQITNANYKRHGMKLMILGNDEPYNNEFKKDESKNAKEMKKISKDAQDQDNDDHGGGH

Annotated regions:
phrase: IFNAKGPVASSQKFLILYSIVFMLVICFVVLGMFAIFIYKYSYNKNAESGKMHHNAIIETIWFVIPIIIVAALAIPT
type: DOMAIN
name: Cyt_c_oxidase_su2_TM_dom
description: Cytochrome C oxidase subunit II, transmembrane domain

phrase: KDPMVVYAVSAGYKWFFAYPDEHIETVNTLTIPKDRPVVFKLQAMDTMTSFWIPQLGGQKYAMTGMTMNWTLEASQTGTFRGRNSNFNGEGFSRQTFKVNAVSQKDYDKWVK
type: DOMAIN
name: CcO_II-like_C
description: Cytochrome c oxidase subunit II-like C-terminal

phrase: MVVYAVSAGYKWFFAYPDEHIETVNTLTIPKDRPVVFKLQAMDTMTSFWIPQLGGQKYAMTGMTMNWTLEASQTGTFRGRNSNFNGEGFSRQTFKVNA
type: DOMAIN
name: CuRO_UO_II
description: Ubiquinol oxidase subunit 2, cupredoxin domain

phrase: LSGCSNIEIFNAKGPVASSQKFLILYSIVFMLVICFVVLGMFAIFIYKYSYNKNAESGKMHHNAIIETIWFVIPIIIVAALAIPTVKTLYDYEKP
type: DOMAIN
name: Cyt_c_oxidase_su2_TM_dom
description: Cytochrome C oxidase subunit II, transmembrane domain
Protein sequence:
MSEAEARPTNFIRQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPVKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIREYRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIPVHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYQGEGEMVTMPNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIKAERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPVEIRLYDRLFSVPNPGAADDFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRTVGLRDTWAKVGE

Annotated regions:
phrase: VHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPVKEDIEYVESIKNDVEWLGFHWSGNVRYSSDYFDQLHAYAIELINKGLAYVDELTPEQIREYRGTLTQPGKNSPYRDRSVEENLALFEKMRAGGFEEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIPVHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASLESCIREDL
type: DOMAIN
name: Glu/Gln-tRNA-synth_Ib_cat-dom
description: Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain

phrase: PEPNGYLHIGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: VIHWVSAAHALPVEIRLYDRLFSVPNPGAADDFLSVINPESLVIKQGFAEPSLKDAVAGKAFQFEREGYFCL
type: DOMAIN
name: tRNA-synt_1c_C2
description: tRNA synthetases class I (E and Q), anti-codon binding domain

phrase: APRAMAVIDPVKLVIENYQGEGEMVTMPNHPNKPEMGSRQVPFSGEIWIDRADFREEANKQYKRLVLGKEVRLRNAYVIKAERVEKDAEGNITTIFCTY
type: DOMAIN
name: Glu/Gln-tRNA-synth_Ib_codon-bd
description: Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain
Protein sequence:
MQIGQRLGTPLSPSATRVMLLGAGELGKEVIIALQRLGVEVVAVDRYPDAPGHQVAHRAHVIDMTDAAALRAIVEAERPHLIVPEIEAIATDALAAIEAAGLAEVIPTARATQLTMNREGIRRLAAEELGLPTSPYAFADSFEAFSAAIAKIGMPCVVKPVMSSSGKGQSVVKTEADVKPAWDYAMAGGRVNHGRVIVEGFIDFDYEITQLTVRAIDPATDATRTYFCEPVGHVQVAGDYVESWQPQPMSAVALEKSREIAHKVTEALGGRGMFGVELFVNGDDVWFSEVSPRPHDTGLVTLASQRQSEFELHARAILGLPVDPALGTPAASAVIYGGLDERGIAFEGVREALAVPGADLRLFGKPESFAKRRMGVALATGATVDEARERAKRAAAAVRPVSAR

Annotated regions:
phrase: AASAVIYGGLDERGIAFEGVREALAVPGADLRLFGKPESFAKRRMGVALATGATVDEARERAKRAAAA
type: DOMAIN
name: PurT_C
description: PurT, C-terminal

phrase: VMLLGAGELGKEVIIALQRLGVEVVAVDRYPDAPGHQVAHRAHVIDMTDAAALRAIVEAERPHLIVPEIEAIATDALAAIEAAGLAEVIPTARAT
type: DOMAIN
name: PurT/PurK_preATP-grasp
description: PurT/PurK-like, preATP-grasp domain

phrase: RLAAEELGLPTSPYAFADSFEAFSAAIAKIGMPCVVKPVMSSSGKGQSVVKTEADVKPAWDYAMAGGRVNHGRVIVEGFIDFDYEITQLTVRAIDPATDATRTYFCEPVGHVQVAGDYVESWQPQPMSAVALEKSREIAHKVTEALGGRGMFGVELFVNGDDVWFSEVSPRPHDTGLVTLASQRQSEFELHARAI
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold

phrase: AAEELGLPTSPYAFADSFEAFSAAIAKIGMPCVVKPVMSSSGKGQSVVKTEADVKPAWDYAMAGGRVNHGRVIVEGFIDFDYEITQLTVRAIDPATDATRTYFCEPVGHVQVAGDYVESWQPQPMSAVALEKSREIAHKVTEALGGRGMFGVELFVNGDDVWFSEVSPRPHDTGLVTLASQRQSE
type: DOMAIN
name: ATP-grasp_carboxylate-amine
description: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type
Protein sequence:
MSNAQLETAIEAAWEARDTITPATMGETREAIEDTLAALDGGTLRVAEKQDSGDWHVNQWAKKAVLLGFRLKDMEMQGGSAQGGSWWDKVDSKWATWGDNEWGAAGFRAVPNCVVRKSAYIAPGVVLMPSFVNLGAYVDSGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPMQAGPTIIEDNCFIGARSEVVEGCIVREGSVLGMGVFIGQSTKIVDRETGDVMYGEVPSGSVVVAGSLPSKNGVNLYCAVIVKRVDERTRSKTSINELLRD

Annotated regions:
phrase: QLETAIEAAWEARDTITPATMGETREAIEDTLAALDGGTLRVAEKQDSGDWHVNQWAKKAVLLGFR
type: DOMAIN
name: THP_succinylTrfase_dom1
description: Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1

phrase: VDSGTMVDTWATVGSCAQIGKNVHLSGG
type: CONSERVED_SITE
name: Hexapep_transf_CS
description: Hexapeptide transferase, conserved site

phrase: PTIIEDNCFIGARSEVVEGCIVREGSVLGMGVFI
type: REPEAT
name: Hexapep
description: Hexapeptide repeat
Protein sequence:
NIVLTQPESAVKKPGESHKLSCTVSGFDVNGHHMNWVKQVPGEGLEWLLSYRKTYNTYYASGIQGRITFSTESSTTFIEIPNLRVEDTAMYYCARGTGFPQWGYWGSGTFLTVTSVTQ

Annotated regions:
phrase: SHKLSCTVSGFDVNGHHMNWVKQVPGEGLEWLLSYRKTYNTYYASGIQGRITFSTESSTTFIEIPNLRVEDTAMYYCA
type: DOMAIN
name: Ig_V-set
description: Immunoglobulin V-set domain

phrase: NIVLTQPESAVKKPGESHKLSCTVSGFDVNGHHMNWVKQVPGEGLEWLLSYRKTYNTYYASGIQGRITFSTESSTTFIEIPNLRVEDTAMYY
type: DOMAIN
name: Ig-like_dom
description: Immunoglobulin-like domain

phrase: PESAVKKPGESHKLSCTVSGFDVNGHHMNWVKQVPGEGLEWLLSYRKTYNTYYASGIQGRITFSTESSTTFIEIPNLRVEDTAMYYCARGTGFPQWGYWGSGTFLTV
type: DOMAIN
name: Ig_sub
description: Immunoglobulin domain subtype

phrase: QPESAVKKPGESHKLSCTVSGFDVNGHHMNWVKQVPGEGLEWLLSYRKTYNTYYASGIQGRITFSTESSTTFIEIPNLRVEDTAMYYCARGTGFPQWGYWGSGTFLTV
type: DOMAIN
name: Ig_V-set
description: Immunoglobulin V-set domain
Protein sequence:
MPKAKTHSGASKRFRRTGTGKIVRQKANRRHLFEHKPSTRTRRLDGHTRVSANDTQRVNSLLNG

Annotated regions:
phrase: KTHSGASKRFRRTGTGKIVRQKANRR
type: CONSERVED_SITE
name: Ribosomal_bL35_CS
description: Large ribosomal subunit protein bL35, conserved site
Protein sequence:
MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWNITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLAGVVCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQSINPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGCELFVRRMPTFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTRRQISTDLNQYKIGFMATQTVEGNSKSSPRRTIVGDLLKPLNSEYGKVAPGWGTTPLMGVAMALFAIFLSIILEIYNSSILQFTYLNKVYDWFEERLEIQAIVDDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSSLVELLRGSSSVGQSTL

Annotated regions:
phrase: IQAIVDDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSSLVELLRGSSSVGQST
type: DOMAIN
name: Cytochrome_b_N_euk/bac
description: Cytochrome b/b6, N-terminal domain, eukaryotic/bacterial

phrase: VYDWFEERLEIQAIVDDITSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSSLVELLRGSSSVGQST
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: TSKYVPPHVNIFYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRWSASMMVLMMILHVFRVYLTGGFKKPRELTWVTGVVLAVLTASFGVTGYSLPWDQIGYWAVKIVTGVPEAIPVIGSSLVELLRGSSSVGQST
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain
Protein sequence:
MSYSAPSQITQRQLAYFEGKHVLIAGELIDDFPFELAKHCESTSIFTTNYSYYKQFAGHNSIQCYFGSELTEPTNVDMILLYWPKAKAEAEYLLTMLLAKLGKNTEIVVVGENRSGVKSIEKMFADFGPINKFDSARRCSFYWGQCTEEAPTFNQQDWFKEYQVEFENHTIEVRSLPGVFSHGEFDKGSELLLQTLPALRGHVLDFGCGAGVIGSVMKTINPKIHLDMVDISALAIASSIETLKANNLEGNVFASDVYSDTKENYQFIVSNPPFHAGLKTHYSSTEELLEKAPQNLTHEGQLILVANSFLQYPPIIEKAFGECLTLAKNNKFKIYSAQK

Annotated regions:
phrase: IEVRSLPGVFSHGEFDKGSELLLQTLPALRGHVLDFGCGAGVIGSVMKTINPKIHLDMVDISALAIASSIETLKANNLEGNVFASDVYSDTKENYQFIVSNPPFHAGLKTHYSSTEELLEKAPQNLTHEGQLILVANSFLQYPPIIEKAFGECLTLAKNNKFKI
type: DOMAIN
name: Small_mtfrase_dom
description: Methyltransferase small domain

phrase: SQITQRQLAYFEGKHVLIAGELIDDFPFELAKHCESTSIFTTNYSYYKQFAGHNSIQCYFGSELTEPTNVDMILLYWPKAKAEAEYLLTMLLAKLGKNTEIVVVGENRSGVKSIEKMFADFGPINKFDSARRCSFYWGQCTEEAPTFNQQDWFKE
type: DOMAIN
name: Mtase_sm_N
description: Methyltransferase small, N-terminal

phrase: IVSNPP
type: CONSERVED_SITE
name: DNA_methylase_N6_adenine_CS
description: DNA methylase, N-6 adenine-specific, conserved site
Protein sequence:
MTKHVFVTGGVVSSLGKGLTASSLGNLLKARGLRVTMQKLDPYLNVDPGTMNPFEHGEVFVTDDGGETDLDLGHYERFVDENLTQASNTTTGSVYSSVIAKERRGEYLGKTVQVIPHITNEIKERIANLASSDVDVVITEVGGTVGDIEILPFLEAIRQYRLDVGRQNVCYIHVTLVPFIGPAGEQKTKPTQHSVTELRSRGIQPDVIVCRSDREIPDGLREKISNLCDVPIEGIIAAPDAASLYEIPLRMHSGGLDTYVCNLLQLGADEIDLEPWRALVRRVESVWKPLRIGIVGKYVSLPDAYLSVAEALRHAAFAHSVDLEIDWIMSDHVEGLLVEEQLEHLDGVVLPGGFGERGVEGKIAAAGYTREKNVPCLGLCLGMQVMTIEFARHVMNLHGAHSSEFDSQDAVTPHPVIDLMESQRKVEDKGGTMRLGAYVAVLAEGSRVAELYGRPVVQERHRHRYEFNPRYRSQFEEWGLVCSGVSPDGKLVEFVELPDHPFWIGTQAHPELKSRPNRPAPLFDGFIAAALERAEAADPERFAKAAPPVADQVSITLD

Annotated regions:
phrase: KHVFVTGGVVSSLGKGLTASSLGNLLKARGLRVTMQKLDPYLNVDPGTMNPFEHGEVFVTDDGGETDLDLGHYERFVDENLTQASNTTTGSVYSSVIAKERRGEYLGKTVQVIPHITNEIKERIANLASSDVDVVITEVGGTVGDIEILPFLEAIRQYRLDVGRQNVCYIHVTLVPFIGPAGEQKTKPTQHSVTELRSRGIQPDVIVCRSDREIPDGLREKISNLCDVPIEGIIAAPDAASLYEIPLRMHSGGLDTYV
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: LRIGIVGKYVSLPDAYLSVAEALRHAAFAHSVDLEIDWIMSDHVEGLLVEEQLEHLDGVVLPGGFGERGVEGKIAAAGYTREKNVPCLGLCLGMQVMTIEFARHVMNLHGAHSSEFDSQDAVTPHPVIDLMESQRKVEDKGGTMRLGAYVAVLAEGSRVAELYGRPVVQERHRHRYEFNPRYRSQFEEWGLVCSGVSPDGKLVEFVELPDHPFWIGTQAHPELKSRPNRPAPLFDGF
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain

phrase: LPDAYLSVAEALRHAAFAHSVDLEIDWIMSDHVEGLLVEEQLEHLDGVVLPGGFGERGVEGKIAAAGYTREKNVPCLGLCLGMQVMTIEFARHVMNLHGAHSSEFDSQDAVTPHPVIDLMESQRKVEDKGGTMRLGAYVAVLAEGSRVAELYGRPVVQERHRHRYEFNPRYRSQFEEWGLVCSGVSPDGKLVEFVELPDHPFWIGTQAHPELKSRPNRPAPLFDGFI
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: KHVFVTGGVVSSLGKGLTASSLGNLLKARGLRVTMQKLDPYLNVDPGTMNPFEHGEVFVTDDGGETDLDLGHYERFVDENLTQASNTTTGSVYSSVIAKERRGEYLGKTVQVIPHITNEIKERIANLASSDVDVVITEVGGTVGDIEILPFLEAIRQYRLDVGRQNVCYIHVTLVPFIGPAGEQKTKPTQHSVTELRSRGIQPDVIVCRSDREIPDGLREKISNLCDVPIEGIIAAPDAASLYEIPLRMHSGGLDTYVCNLLQ
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal
Protein sequence:
MGLDQEDLDLTNDDHFIDKEKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYFINVGIHKIVKANSRITSTVDPSIYLRFKKVRVGEPSIINVNTVENINPHMCRLADMTYAAPIFVNIEYVHGSHGNKAKSAKDNVIIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFIIKGTEKVLLIQEQLSKNRIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKEKIYLFLHRFVKKIPIIIVLKAMGMESDQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQALDYLEAKVKKISYGTPPEKDGRALSILRDLFLAHVPVPDNNFRQKCFYVGVMLRRMIEAMLNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMLSEAIKNVDHILNKPIRASRFDFSQCLNKDSRYSISLGLERTLSTGNFDIKRFRMHRKGMTQVLTRLSFIGSMGFITKISPQFEKSRKVSGPRSLQPSQWGMLCPCDTPEGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEVLSAEELHTPDSFLVILNGLILGKHSRPQYFANSLRRLRRAGKIGEFVSVFTNEKQHCVYVASDVGRVCRPLVIADKGISRVKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNALIALYESDGTTELDEGAEAAKADTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSFSGYDIEDAIVMNKSSLDRGFGRCIVMKKIVAMSQKYDNCTADRILIPQRTGPDAEKMQILDDDGLATPGEIIRPNDIYINKQVPVDTVTKFTSALSDSQYRPAREYFKGPEGETQVVDRVALCSDKKGQLCIKYIIRHTRRPELGDKFSSRHGQKGVCGIIIQQEDFPFSELGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAFGERSGHADKVETISATLVEKGFSYSGKDLLYSGISGEPVEAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQELQSMNVVPRLKLTEA

Annotated regions:
phrase: QVLTRLSFIGSMGFITKISPQFEKSRKVSGPRSLQPSQWGMLCPCDTPEGESCGLVKNLALMTH
type: DOMAIN
name: RNA_pol_Rpb2_3
description: RNA polymerase Rpb2, domain 3

phrase: GLVKQHLDSFNYFINVGIHKIVKANSRITSTVDPSIYLRFKKVRVGEPSIINVNTVENINPHMCRLADMTYAAPIFVNIEYVHGSHGNKAKSAKDNVIIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFIIKGTEKVLLIQEQLSKNRIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKEKIYLFLHRFVKKIPIIIVLKAMGMESDQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQALDYLEAKVKKISYGTPPEKDGRALSILRDLFLAHVPVPDNNFRQKCFYVGVMLRRMIEAMLNKDAMDDKDYVGNKRLELSGQLISLLFEDLFKTMLSEAIKNVDHILNKP
type: DOMAIN
name: RNA_pol_bsu_protrusion
description: RNA polymerase, beta subunit, protrusion

phrase: KNRIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKEKIYLFLHRFVKKIPIIIVLKAMGMESDQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQALDYLEAKVKKISYGTPPEKDGRALSILRDLFLAHVPVPDNNFRQKCFYVGVMLRRMIEAMLNKDAMDDKDYVGNKRL
type: DOMAIN
name: RNA_pol_Rpb2_2
description: RNA polymerase Rpb2, domain 2

phrase: GDKFSSRHGQKG
type: CONSERVED_SITE
name: RNA_pol_bsu_CS
description: RNA polymerase, beta subunit, conserved site

phrase: VAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDTLLYLLVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSFSGYDIEDAIVMNKSSLDRGFGRCIVMKKIVAMSQKYDNCTADRILIPQRTGPDAEKMQILDDDGLATPGEIIRPNDIYINKQVPVDTVTKFTSALSDSQYRPAREYFKGPEGETQVVDRVALCSDKKGQLCIKYIIRHTRRPELGDKFSSRHGQKGVCGIIIQQEDFPFSELGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSCGRFHYGSAFGERSGHADKVETISATLVEKGFSYSGKDLLYSGISGEPVEAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKS
type: DOMAIN
name: DNA-dir_RNAP_su2_dom
description: DNA-directed RNA polymerase, subunit 2, hybrid-binding domain

phrase: GGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCTTCKNGDNIATMKLPYACKLLFQELQSMNVVPRL
type: DOMAIN
name: RNA_pol_Rpb2_7
description: RNA polymerase Rpb2, domain 7

phrase: VILNGLILGKHSRPQYFANSLRRLRRAGKIGEFVSVFTNEKQHCVYVASDVGRVCRPLVI
type: DOMAIN
name: RNA_pol_Rpb2_4
description: RNA polymerase Rpb2, domain 4

phrase: FDDFIRDGLIEYLDVNEENNALIALYESDGTTELDEGAEAAKADTTHIEIE
type: DOMAIN
name: RNA_pol_Rpb2_5
description: RNA polymerase Rpb2, domain 5
Protein sequence:
MHDRISSLGEKKLISRIISRARSVFGSSEVMGLGDDAALIDAGEEFLVLTSDLLLETRHFPDPERPRDMGWKTVTVNMSDLAAMGSRPEGFILSVALPDLELEFFDSLMDGVIEACCHYQAPLIGGDTNEADEIILSGTAIGRAEKDMVLMKSGARPGDLVAVTGPLGVGAAGTELILSGRDTGGFENAVERSLRPVARIEEGLILAESGLVSSATDITDGLVSELGELMDASGTGMRIYEDRLPLGREVPEIASILGRDPLELALYYGEDFELVFTAPPTGMEELSDMMELHVIGEVTVGGGIEMVDKDGVTYKLHVRGYEHLSPG

Annotated regions:
phrase: RPGDLVAVTGPLGVGAAGTELILSGRDTGGFENAVERSLRPVARIEEGLILAESGLVSSATDITDGLVSELGELMDASGTGMRIYEDRLPLGREVPEIASILGRDPLELALYYGEDFELVFTAPPTGMEELSDMMELHVIGEVTVGGGIEMV
type: DOMAIN
name: PurM-like_C_dom
description: PurM-like, C-terminal domain

phrase: GDDAALIDAGEEFLVLTSDLLLETRHFPDPERPRDMGWKTVTVNMSDLAAMGSRPEGFILSVALPDLELEFFDSLMDGVIEACCHYQAPLIGGDTNEADEIILSGTAIG
type: DOMAIN
name: PurM-like_N
description: PurM-like, N-terminal domain
Protein sequence:
MSIISTKYLLQDAQAKGYAVPAFNIHNAETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSISYDMPLALHLDHHESLDDIRRKVNAGVRSAMIDGSHFPFEQNVTLVKSVVDFCHLNDCSVEAELGRLGGMEDDMSVDAESAFLTDPQEAKRFVELTGVDSLAVAIGTAHGLYTKRPKIDFQRLAEIRDVVDIPLVLHGASDVPDEFVRRTIELGVCKVNVATELKIAFSAAVKEWFNENPQGNDPRFYMRVGMDAMKEVVKNKINVCGSANKLVLDSAVVL

Annotated regions:
Protein sequence:
MIEIDGRSLRVEDVYAVAVEYDRVSISDDTLKAVEEKHEAFLKLINSGKTVYGVNTGFGSLLNVHIERDQEIELQKNLIRSHSSGVGDYLENRYVRAIMAVRLNSLAAGYSAVSADLLNMMVEMLNRDVIPAVPKYGSVGASGDLAPLAHIGLAMMGEGKAFFEGRLMDSARALEKAGLKPYQFKEKEGVALINGTSFMSGILSIAVMDAHDILENAIRSALLSFEALGGTSKAFTPWILGARPHLGQVAIGNRFREYLTGSDIVKRADSVKVQDAYTLRCIPQVYGSVADVIDYVENVLSVEINSATDNPLFNGEEVVSGGNFHGEPVALAADFLAIALTDLGNMVERRIARLVDTNLSGLPPFLTPDSGLNSGYMIPQYTAAALCNRNKVLAYPSSADTIPTSANQEDHVSMGATGSLKLLEIIDNVRYIIAIEYLLGSQALEFTDKGMSPSTRKIYEKIREKVEKLDHDRPPSFDIETIRKMMDKKEFISALP

Annotated regions:
phrase: GSVGASGDLAPLAHIG
type: ACTIVE_SITE
name: Phe/His_NH3-lyase_AS
description: Phenylalanine/histidine ammonia-lyases, active site
Protein sequence:
MSPAGKLPSEAERILVRKSGAWTNPSYGSYPEKRPILEYIEKGVVNIDKPKGPTSHEVAAWVKAILGVSTAGHAGSLDPKVTGLLPTLLGKATKAVPALRLSGKEYVCLLKLHKEMPQKLVRKVCEEFTGPIYQMPPIKSAVKRVIRIRTIYYLEVLEIEGSFVLFRVGCEAGTYIRKLCHDIGLALGCGGHMQELRRTKAGPFTEETLVTLQDLKDAYVLWKEDGDESEIRRVIMPMETAVSHLPKIILRDSAVDAICSGAALAVPGITSLDANLKKGELIALFTLKGELVALAKAEMSTEELLKASTGLAATSVRIMMEIGTYPKGWTKKEYGVES

Annotated regions:
phrase: RILVRKSGAWTNPSYGSYPEKRPILEYIEKGVVNIDKPKGPTSHE
type: DOMAIN
name: Dyskerin-like
description: Dyskerin-like

phrase: KAILGVSTAGHAGSLDPKVTGLLPTLLGKATKAVPALRLSGKEYVCLLKLHKE
type: DOMAIN
name: PsdUridine_synth_N
description: Pseudouridine synthase II, N-terminal

phrase: PKIILRDSAVDAICSGAALAVPGITSLDANLKKGELIALFTLKGELVALAKAEMSTEELLKASTGLAATSV
type: DOMAIN
name: PUA
description: PUA domain

phrase: MSPAGKLPSEAERILVRKSGAWTNPSYGSYPEKRPILEYIEKGVVNIDKPKGPTSHEV
type: DOMAIN
name: Dyskerin-like
description: Dyskerin-like

phrase: PKIILRDSAVDAICSGAALAVPGITSLDANLKKGELIALFTLKGELVALAKAEMSTEELLKASTGLAATSVRIM
type: DOMAIN
name: PUA
description: PUA domain

phrase: RKLCHDIGLALGCGGHMQELRRTKAGPFTEETLVTLQDLKDAYVLWKEDGDESEIRRVIMPMETA
type: DOMAIN
name: TruB_C
description: tRNA pseudouridylate synthase B, C-terminal
Protein sequence:
MTCYRGFLLGSCCRVAGGRAAALRGPGAGGPAARPRLGGDGGGRRHLGQGQPRELAGCGSRADGGFRPSRVVVVAKTTRYEFEQQRYRYAELSEEDLKQLLALKGSSYSGLLERHHIHTKNVEHIIDSLRNEGIEVRLVKRREYDEETVRWADAVIAAGGDGTMLLAASKVLDRLKPVIGVNTDPERSEGHLCLPVRYTHSFPEALQKFYRGEFRWLWRQRIRLYLEGTGINPVPVDLHEQQLSLNQHNRALNIERAHDERSEASGPQLLPVRALNEVFIGESLSSRASYYEISVDDGPWEKQKSSGLNLCTGTGSKAWSFNINRVATQAVEDVLNIAKRQGNLSLPLNRELVEKVTNEYNESLLYSPEEPKILFSIREPIANRVFSSSRQRCFSSKVCVRSRCWDACMVVDGGTSFEFNDGAIASMMINKEDELRTVLLEQ

Annotated regions:
Protein sequence:
MSMFCFQCQETAKGTGCTIKGVCGKTADVANLQDLLLYVMKGIAINSLQARELGIVRQDVDKFVMEGLFATITNANFDNARFVALVREGLALRDSLKADIVKAGGVLPANLHDSAIWTADSAEEFEQKAAQVGILATENEDVRSLRELLIYGLKGMAAYAEHAFALGYEDNSIFAFMMKGLAATTDDSLSADQLVALVLEAGKYGVDVMALLDKANTTSYGNPEITKVNIGVRNNPAILISGHDLRDLEDLLKQTEGTGVDVYTHGEMLPAHYYPAFKKYAHFVGNYGNAWWKQDKEFDSFNGAILLTTNCLVPPKDSYKDRLFTTSVVGYEGVKHIPAREAGKVKDFSAVIELAKTLPAPTEIETGEIVGGFAHNQVFAVADKVVEAVKSGAVKRFFVMAGCDGRMKSRDYYTEFAKALPQDTIILTAGCAKYKYNKLALGDIGGIPRVLDAGQCNDSYSLAVIALKLKEVFGLDDVNQLPISYNIAWYEQKAVIVLLALLYLGVKNIHLGPTLPGFLSPNVAKVLVENFGIAGITTVEDDVNLFMGA

Annotated regions:
Protein sequence:
MDRIVEIEKVSFESEFEVSLRPSSFDDYIGQEKIKQNLDVFIKAAKKRGECLDHVLFYGPPGLGKTTLAHIIANEMAVSIKMTAAPMIEKSGDLAAILTNLQEGDVLFIDEIHRLSPAIEEVLYPAMEDFRLDIIIGSGPAAQTIKIDLPKFTLIGATTRAGMISAPLRDRFGMDFRLQFYSTAELSRIIQIASVKLGKECDKAAALEIAKRARATPRIALRLLKRIRDFAEVNDEAMISHERAKEGLNALGVNSLGFDEMDIKYLEILLDAKRRPLGLSTIAAALSEDEGTVEDVIEPYLLANGFIERTAKGRIASEKCFETFKIKLNRTKGLFDGE

Annotated regions:
phrase: LGFDEMDIKYLEILLDAKRRPLGLSTIAAALSEDEGTVEDVIEPYLLANGFIERTAKGRIASEKCFET
type: DOMAIN
name: RuvB_C
description: RuvB C-terminal winged helix domain

phrase: CLDHVLFYGPPGLGKTTLAHIIANEMAVSIKMTAAPMIEKSGDLAAILTNLQEGDVLFIDEIHRLSPAIEEVLYPAMEDFRLDIIIGSGPAAQTIKIDLPKFTLIGATTRAGMISAPLRDRFGMDFRLQFYSTA
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LRPSSFDDYIGQEKIKQNLDVFIKAAKKRGECLDHVLFYGPPGLGKTTLAHIIANEMAVSIKMTAAPMIEKSGDLAAILTNLQEGDVLFIDEIHRLSPAIEEVLYPAMEDFRLDIIIGSGPAAQTIKIDLPKFTLIGATTRAGMISAPLRDRFGMDFR
type: DOMAIN
name: RuvB-like_N
description: RuvB-like P-loop domain

phrase: YSTAELSRIIQIASVKLGKECDKAAALEIAKRARATPRIALRLLKRIRDFAEVNDEAMISHERAKEGLNALGV
type: DOMAIN
name: AAA_lid_4
description: RuvB, AAA lid domain
Protein sequence:
MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPHARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPIWVVSEDMERDVFMSATEAQAHGIVDLVAVQ

Annotated regions:
phrase: RIAFPHARVMIHQ
type: ACTIVE_SITE
name: ClpP_His_AS
description: ClpP, histidine active site
Protein sequence:
MSLTNEQIIEAIASKTVTEIVELISAMEEKFGVSAAAAAVAVAAGPAEVAEEKTEFDVVLAEAGANKVAVIKAVRGATGLGLKEAKDLVESAPANLKEGISKAEAEALKKELEEAGAKVEIK

Annotated regions:
phrase: TNEQIIEAIASKTVTEIVELISAMEEKFGVSAAAAAVAVAAGPAEV
type: DOMAIN
name: Ribosomal_bL12_oligo
description: Large ribosomal subunit protein bL12, oligomerization

phrase: FDVVLAEAGANKVAVIKAVRGATGLGLKEAKDLVESAPANLKEGISKAEAEALKKELEEAGAKVEI
type: DOMAIN
name: Ribosomal_bL12_C
description: Large ribosomal subunit protein bL12, C-terminal
Protein sequence:
MQENIKLNTIPEALEDIRNGKVIIVVDDEDRENEGDFICAAECITPEIVNFMATHGRGLICVPLIEDRCEELGLDLMVGRNTASFETPFTVSVDLIGDGCTTGISAQDRFKTIKALVNPETEPEKLGKPGHIFPLKAKAGGVLRRAGHTEAGIDFARMAGFRPAAVLVEIMNEDGSMARLPDLVKVAERFDLKLVSIQDLIAYRLEEESLIEKRVEDVHMPTEFGEFKLTAYEQKNTGDNHLALVKGSWDEDEPVLVRVHSSCVTGDIFGSCRCDCGGQLHNAMEMVEREGKGVVLYMNQEGRGIGLVNKLKSYKLQEEGLDTVEANLKLGFEMDQRDYGVGAQILRDLGIKKIKLISNNPKKRVGLIGYGLEIVDNLPIEIAPNKYNEKYLKTKRDKMGHHILKDAD

Annotated regions:
phrase: RVEDVHMPTEFGEFKLTAYEQKNTGDNHLALVKGSWDEDEPVLVRVHSSCVTGDIFGSCRCDCGGQLHNAMEMVEREGKGVVLYMNQEGRGIGLVNKLKSYKLQEEGLDTVEANLKLGFEMDQRDYGVGAQILRDLGIKKIKLISNNPKKRVGLIGYGLEIVDNL
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MMKSKMKLMPLLVSVTLISGCTVLPGSNMSTMGKDVIKQQDADFDLDKMVNVYPLTPRLIDQLRPRPNVARPNMTLESEIANYQYRVGPGDVLNVTVWDHPELTTPAGQYRSSSDTGNWVQPDGTMFYPYIGKVHVVGKTLAEIRSDITGRLATYIADPQVDVNIAAFRSQKAYISGQVNKSGQQAITNVPLTILDAINAAGGLTDTADWRNVVLTHNGREERISLQALMQNGDLNQNRLLYPGDILYVPRNDDLKVFVMGEVKKQSTLKMDFSGMTLTEALGNAEGIDMTTSNASGIFVIRPLKGEGGRNGKIANIYQLDMSDATSLVMATEFRLQPYDVVYVTTAPVSRWNRLINQLLPTISGVRYMTDTASDIHNW

Annotated regions:
phrase: QKAYISGQVNKSGQQAITNVPLTILDAINAAGGLTDTADWRNVVLTHNGREERISLQALMQNGDLNQNRLLYPGDILY
type: DOMAIN
name: SLBB_dom
description: SLBB domain

phrase: KVFVMGEVKKQSTLKMDFSGMTLTEALGNAEGIDMTTSNASGIFVIRPLKGEGGRNGKIANIYQLDMSDATSLVMATEFRLQPYDVVY
type: DOMAIN
name: SLBB_dom
description: SLBB domain

phrase: ANYQYRVGPGDVLNVTVWDHPELTTPAGQYRSSSDTGNWVQPDGTMFYPYIGKVHVVGKTLAEIRSDITGRLATYIADPQVDVN
type: DOMAIN
name: Poly_export_N
description: Polysaccharide export protein, N-terminal domain

phrase: APVSRWNRLINQLLPTISGVRYMTDTASD
type: DOMAIN
name: Wza_C
description: Outer-membrane lipoprotein Wza, C-terminal domain
Protein sequence:
MKKKVIFGNWKMNGTNESLTDFLNQVDNKIDSSKIIAGLAVPYVMLQTGLKLAKNVKIAAQNVHYKDKGAYTGEISTTMLKEVGVEYVIIGHSERREMFNETDLDVNKKAKVLLENNITPIICCGETLQTKESGKTIEFVNNQINIMFEGIKKEDAIKAIIAYEPIWAIGTGKTATSSDAEEVCKQIRNNLSKIYDKNTAEQIIIQYGGSVKPSNIQEYLKMPNIDGALVGGASLLASDYLGLVNYNE

Annotated regions:
phrase: AYEPIWAIGT
type: ACTIVE_SITE
name: Triosephosphate_isomerase_AS
description: Triosephosphate isomerase, active site
Protein sequence:
MEKHSDSNKCPFMGGTQKHTAGNGTKNRDWWPNELKLNILRQNGAASNPMDKDFEYATAFNSINFAELKQDVIDLMTTSQDWWPADYGNYGPFMVRMAWHSAGTYRVGDGRGGAASGSQRFAPINSWPDNGNLDKARLLLWPVKKKYGAKLSWADLMILAGTYAMESMGLKTFGFAGGREDVWEPEQDIYWGSETEWLGNDARYEDGNLESDLGAAHMGLIYVNPEGPNGNPDPMGSAKDIRETFGRMAMNDEETVALTAGGHTFGKAHGAANPDKFVGVEPAGAPIEQMSMGWKNAYKSGVLDDAITSGIEGAWTPNPTTWDADYFDVLLNYDWELTKSPAGAHQWKPTAASNAKKAPKAGDANGTQDLMMTTADMALKVDPEYLKISKRFHKDHKAFEDAFARAWYKLTHRDMGPISRYLGPEVAKEELLWQDPIPAGTALSDKEVSILKEAISNSNLSISQLVTTAWASASTFRGSDMRGGANGGRIRLEPQKKWAVNNPYELNKVITIFEGIQKDFNGTVSMADLIVLGGSVGVEKAVKNAGYSISVPFTSGRGDASQEQTDLVSFGYLEPRADGFRNFIKKDLKLAAEELLIDKAQLLTLSIPEMTVLVGGLRMLGANYDASKYGVFTENVGTLSNDFFTNILDLGITWKATSTDDALFEGTDRKTGEIKFRGTRADLIFGSNTELRAIAEVYAADDAKERFVYDFVSAWTKVMNLDRFDLKK

Annotated regions:
phrase: LDKARLLLWPVKKKYGAKLSWADLMILAGTYAMESMGLKTFGFAGGREDVWEPEQDIYWGSETEWLGNDARYEDGNLESDLGAAHMGLIYVNPEGPNGNPDPMGSAKDIRETFGRMAMNDEETVALTAGGHTFGKAHGAANPDKFVGVEPAGAPIEQMSMGWKNAYKSGVLDDAITSGIEGAWTPNPTTWDADYFDVLLNYDWELTKSPAGAHQWKPTAASNAKKAPKAGDANGTQDLMMTTADMALKVDPEYLKISKRFHKDHKAFEDAFARAWYKLTHRDMGPISRYLGPEVAKEE
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: GPFMVRMAWHSAGT
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: LSWADLMILAGTYAMES
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: GLKTFGFAGGRE
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: TVALTAGGHTFGKAH
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: WTPNPTTWDADYFDV
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: FARAWYKLTHRDMGPISRYLGPEVAKEELLWQDPIPAGTALSDKEVSILKEAISNSNLSISQLVTTAWASASTFRGSDMRGGANGGRIRLEPQKKWAVNNPYELNKVITIFEGIQKDFNGTVSMADLIVLGGSVGVEKAVKNAGYSISVPFTSGRGDASQEQTDLVSFGYLEPRADGFRNFIKKDLKLAAEELLIDKAQLLTLSIPEMTVLVGGLRMLGANYDASKYGVFTENVGTLSNDFFTNILDLGITWKATSTDDALFEGTDRKTGEIKFRGTRADLIFGSNTELRAIAEVYAA
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: ADYGNYGPFMVRMAWHSAGTYRVGDGRGGAASGSQRFAPINSWPDNGNLDKARLLLWPVKKKYGAKLSWADLMILAGTYAMESMGLKTFGFAGGREDVWEPEQDIYWGSETEWLGNDARYEDGNLESDLGAAHMGLIYVNPEGPNGNPDPMGSAKDIRETFGRMAMNDEETVALTAGGHTFGKAHGAANPDKFVGVEPAGAPIEQMSMGWKNAYKSGVLDDAITSGIEGAWTPNPTTWDADYFDVLLNYDWELTKSPAGAHQWKPTAASNAKKAPKAGDANGTQDLMMTTADMALKVDPEYLKISKRFHK
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: GPFMVRMAWHS
type: ACTIVE_SITE
name: Peroxidases_AS
description: Peroxidase, active site