nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSKKSIINLSLAQLQKEFDCLGLPKYTAKQLMDWVYNKRITSLEQVTNISKQNLKIIEEHFDIGRYTYKLIDTSEDGTKKYLFDTQKGNIETVMIPEDDRFTLCISCQIGCKMNCSFCMTGKCGFSANLSAGDIVNQVLSVDESVILTNIVFMGMGEPFDNLSEVLKAIEILTSLWGLAWSPKRITVSTSGLIKGTKEFLDKTRCHLAVSLHNPFPEERKDIMPIENSNSIKDLIALLKQYDFTHQRRLSFEYIVFEGLNDSIRHAQGMVKMLKGIFCRVNLIRFHEVEGLDFKSPNMEKMQNFRDYLNKNNIISTVRRSRGEDIAAACGQLKNSHKTE

Annotated regions:
phrase: IINLSLAQLQKEFDCLGLPKYTAKQLMDWVYNKRITSLEQVTNISKQ
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: SCQIGCKMNCSFCMTGKCGFSANLSAGDIVNQVLSVDESVILTNIVFMGMGEPFDNLSEVLKAIEILTSLWGLAWSPKRITVSTSGLIKGTKEFLDKTRCHLAVSLHNPFPEERKDIMPIENSNSIKDLIALLKQYDFTHQRRLSFEYIVFEGLND
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SKKSIINLSLAQLQKEFDCLGLPKYTAKQLMDWVYNKRITSLEQVTNISKQNLKIIEEHFDIGRYTYKLIDTSEDGTKKYLFDTQKGNIETVMIPEDDRFTLCISCQIGCKMNCSFCMTGKCGFSANLSAGDIVNQVLSVDESVILTNIVFMGMGEPFDNLSEVLKAIEILTSLWGLAWSPKRITVSTSGLIKGTKEFLDKTRCHLAVSLHNPFPEERKDIMPIENSNSIKDLIALLKQYDFTHQRRLSFEYIVFEGLNDSIRHAQGMVKMLKGIFCRVNLIRFHEVEGLDFKSPNMEKMQNFRDYLNKNNIISTVRRSRGEDIAAACGQLKNSH
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: EDDRFTLCISCQIGCKMNCSFCMTGKCGFSANLSAGDIVNQVLSVDESVILTNIVFMGMGEPFDNLSEVLKAIEILTSLWGLAWSPKRITVSTSGLIKGTKEFLDKTRCHLAVSLHNPFPEERKDIMPIENSNSIKDLIALLKQYDFTHQRRLSFEYIVFEGLNDSIRHAQGMVKMLKGIFCRVNLIRFHEVEGLDFKSPNMEKMQNFRDYLNKNNIISTVRRSRGE
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
ITCGQVSSSLAPCINYLRAGGVVPANCCNGVRSLNNAAKTTADRQAACNCLKSAFNSIKGLNLNLAAGLPGKCGVSVPYKISPSTDCKSVK

Annotated regions:
phrase: CGQVSSSLAPCINYLRAGGVVPANCCNGVRSLNNAAKTTADRQAACNCLKSAFNSIKGLNLNLAAGLPGKCGVSVPYKISPSTD
type: DOMAIN
name: Bifunc_inhib/LTP/seed_store
description: Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain

phrase: CGQVSSSLAPCINYLRAGGVVPANCCNGVRSLNNAAKTTADRQAACNCLKSAFNSIKGLNLNLAAGLPGKCGVSVPYKISPSTD
type: DOMAIN
name: Bifunc_inhib/LTP/seed_store
description: Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
Protein sequence:
MASKEELLQELSDAIVSCKKDRVIAAVEKAKEVMEPAEIIEKGLAAGMNQVGTLFERGKLFLPHVMMAADSMTAGVNILEAEMPAGTETKKLGVIVNGTVEGDVHDIGKSIVSTMLQSAGFEVHDIGRDVPIKNFVEKAKEVNADMIGLSALMTTTMQGQRDVIELLKEEGMRERVKVMVGGAPATQAWADKIGADCYAENASEAVAKAKELLLGK

Annotated regions:
phrase: MASKEELLQELSDAIVSCKKDRVIAAVEKAKEVMEPAEIIEKGLAAGMNQVGTLFERGKLFLPHVMMAADSMTAGVNILEAEMPAGTETK
type: DOMAIN
name: Cbl-bd_cap
description: Cobalamin (vitamin B12)-binding module, cap domain

phrase: ELSDAIVSCKKDRVIAAVEKAKEVMEPAEIIEKGLAAGMNQVGTLFERGKLFLPHVMMAADSMTAGVNILEAEMPAGTETKKLGVIVNGTVEGDVHDIGKSIVSTMLQSAGFEVHDIGRDVPIKNFVEKAKEVNADMIGLSALMTTTMQGQRDVIELLKEEGMRERVKVMVGGAPATQAWADKIGADCYAENASE
type: DOMAIN
name: Corrinoid_p
description: Methyltransferase cognate corrinoid protein

phrase: LLQELSDAIVSCKKDRVIAAVEKAKEVMEPAEIIEKGLAAGMNQVGTLFERGKLFLPHVMMAADSMTAGVNIL
type: DOMAIN
name: Cbl-bd_cap
description: Cobalamin (vitamin B12)-binding module, cap domain

phrase: LGVIVNGTVEGDVHDIGKSIVSTMLQSAGFEVHDIGRDVPIKNFVEKAKEVNADMIGLSALMTTTMQGQRDVIELLKEEGMRERVKVMVGGAPATQAWADKIGADCYAENASEAVAKAKELLLG
type: DOMAIN
name: Cobalamin-bd
description: Cobalamin (vitamin B12)-binding domain

phrase: VIVNGTVEGDVHDIGKSIVSTMLQSAGFEVHDIGRDVPIKNFVEKAKEVNADMIGLSALMTTTMQGQRDVIELLKEEGMRERVKVMVGGAPATQAWADKIGADCYAENASEA
type: DOMAIN
name: Cobalamin-bd
description: Cobalamin (vitamin B12)-binding domain

phrase: EELLQELSDAIVSCKKDRVIAAVEKAKEVMEPAEIIEKGLAAGMNQVGTLFERGKLFLPHVMMAADSMTAGVNILEAEMPAG
type: DOMAIN
name: Cbl-bd_cap
description: Cobalamin (vitamin B12)-binding module, cap domain
Protein sequence:
MSRVFDVAVVGVTGAVGQVMVSILEERQFPVGRLYALASERSAGKRVQFRGQSIVVENLDTFDFSKVQIGLFSPGASVSKIYAPKAGEAGCVVIDNTSQFRQDADIPLVVPEVNPQAIAQYKNRHIIANPNCSTIQMLVALKPIYDAVGITRINVATYQSVSGTGKEAIEELAGQTAALLNAKPIEPTVYPKQIAFNVLPHIDVFMDNGYTKEEMKMIWETQKIMGDDRILVNPTAVRVPVFYGHSEAVHIETREKITAEQARALLSKAPGVVVMDERAPGGYPTAVTEAAGTDPVFVGRIREDLSHPNGLNLWVVSDNIRKGAALNSVQIAEILVKDYI

Annotated regions:
phrase: DVAVVGVTGAVGQVMVSILEERQFPVGRLYALASERSAGKRVQFRGQSIVVENLDTFDFSKVQIGLFSPGASVSKIYAPKAGEAGCVVIDNTSQFRQDADIPLVVPEVNPQAIAQ
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: VAVVGVTGAVGQVMVSILEERQFPVGRLYALASERSAGKRVQFRGQSIVVENLDTFDFSKVQIGLFSPGASVSKIYAPKAGEAGCVVIDNTSQFRQDADIPLVVPEVNPQAIA
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: LKPIYDAVGITRINVATYQSVSGTGKEAIEELAGQTAALLNAKPIEPTVYPKQIAFNVLPHIDVFMDNGYTKEEMKMIWETQKIMGDDRILVNPTAVRVPVFYGHSEAVHIETREKITAEQARALLSKAPGVVVMDERAPGGYPTAVTEAAGTDPVFVGRIREDLSHPNGLNLWVVSDNIR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain
Protein sequence:
MLKVTTAHIHFNRDNTPVSEQFDDIYFSTADGLEESRYVFQEGNNLWRRWLQFGENHFVIAETGFGTGLNFLAVTALFREFRTQYPDSPLKRLFFISFEKYPMSCADLRSAHQAYPQFNSLAEQLRQNWLQPIVGCYRFHFEETVLDLWFGDIADNLPQLGDYMVNKIDAWFLDGFAPSKNPEMWNENLYKQMFRYTKPAGTFATFTAASAVKKGLESAGFSLQKRKGFGKKRECLQGFKPLNAEQNPAVHTPWLLSRSATLSENTDIAIIGGGISSLFSAISLLQRGANVTLYCEDEQPALNASGNKQGAFYPQLSDDDIHNIRFYIHAFAYGQQQLRWAIQQGIEFEHEFCGVALCAYDEKSAVKLAKISDYDWDTSLYQPLNQQELSEKAGLPLPCGGGFIPQGAWLAPRQFVQNGFAFAQKCGLKLKTFEKITALSQSEKGWILHNDKNEQFHHETVIIANGHKLKQFTQTARIPVYSVRGQVSQIPTSSQLLKLKSVLCYDGYLTPADQAKQFHCIGASHVRDCEDRDFSLQEQQENQAKIQLNIAEDWTKEVNTADNLARTGIRCAVRDRIPLVGNVPDFERQADEYRNIFNLRRRKQFIPQAAVFENLYLVGALGSRGLTSAPLLGEILASMIYGEPIPLSEDILHCLNPNRSWMRKLLKGTPVK

Annotated regions:
phrase: DIAIIGGGISSLFSAISLLQRGANVTLYCEDEQPALNASGNKQGAFYPQLSDDDIHNIRFYIHAFAYGQQQLRWAIQQGIEFEHEFCGVALCAYDEKSAVKLAKISDYDWDTSLYQPLNQQELSEKAGLPLPCGGGFIPQGAWLAPRQFVQNGFAFAQKCGLKLKTFEKITALSQSEKGWILHNDKNEQFHHETVIIANGHKLKQFTQTARIPVYSVRGQVSQIPTSSQLLKLKSVLCYDGYLTPADQAKQFHCIGASHVRDCEDRDFSLQEQQENQAKIQLNIAEDWTKEVNTADNLARTGIRCAVRDRIPLVGNVPDFERQADEYRNIFNLRRRKQFIPQAAVFENLYLVGALGSRGLTSAPLLGEILA
type: DOMAIN
name: FAD-dep_OxRdtase
description: FAD dependent oxidoreductase

phrase: PVSEQFDDIYFSTADGLEESRYVFQEGNNLWRRWLQFGENHFVIAETGFGTGLNFLAVTALFREFRTQYPDSPLKRLFFISFEKYPMSCADLRSAHQAYPQFNSLAEQLRQNWLQPIVGCYRFHFEETVLDLWFGDIADNLPQLGDYMVNKIDAWFLDGFAPSKNPEMWNENLYKQMFRYTKPAGTFATFTAASAVKKGLESAGFSLQKRKGFGKKRECLQGF
type: DOMAIN
name: tRNA_MNMC2
description: tRNA mnm(5)s(2)U biosynthesis bifunctional protein MnmC, N-terminal

phrase: PQFNSLAEQLRQNWLQPIVGCYRFHFEETVLDLWFGDIADNLPQLGDYMVNKIDAWFLDGFAPSKNPEMWNENLYKQMFRYTKPAGTFATFTAASAVKKGLESAGFSLQKRKGFGKKRECLQGF
type: DOMAIN
name: MnmC-like_methylTransf
description: MnmC-like methyltransferase

phrase: DIAIIGGGISSLFSAISLLQRGANVTLYCEDEQPALNASGNKQGAFYPQLSDDDIHNIRFYIHAFAYGQQQLRWAIQQGIEFEHEFCGVALCAYDEKSAVKLAKISDYDWDTSLYQPLNQQELSEKAGLPLPCGGGFIPQGAWLAPRQFVQNGFAFAQKCGLKLKTFEKITALSQSEKGWILHNDKNEQFHHETVIIANGHKLKQFTQTARIPVYSVRGQVSQIPTSSQLLKLKSVLCYDGYLTPADQAKQFHCIGASHVRDCEDRDFSLQEQQENQAKIQLNIAEDWTKEVNTADNLARTGIRCAVRDRIPLVGNVPDFERQADEYRNIFNLRRRKQFIPQAAVFENLYLVGALGSRGLTSAPLLGEILASMIYGEPIPLSEDILHCLNPNRSWMRKLLK
type: DOMAIN
name: tRNA_S-uridine_synth_MnmC_C
description: tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC, C-terminal
Protein sequence:
MAFTDLLDALGSMGRFQLNHTALLLLPCGLLACHNFLQNFTAAVPPHHCRGPANHTEASTNDSGAWLRATIPLDQLGAPEPCRRFTKPQWALLSPNSSIPGAATEGCKDGWVYNRSVFPSTIVMEWDLVCEARTLRDLAQSVYMAGVLVGAAVFGSLADRLGCKGPLVWSYLQLAASGAATAYFSSFSAYCVFRFLMGMTFSGIILNSVSLVVEWMPTRGRTVAGILLGYSFTLGQLILAGVAYLIRPWRCLQFAISAPFLIFFLYSWWLPESSRWLLLHGKSQLAVQNLQKVAAMNGRKEEGERLTKEVMSSYIQSEFASVCTSNSILDLFRTPAIRKVTCCLMVIWFSNSVAYYGLAMDLQKFGLSLYLVQALFGIINTPAMLVATATMIYVGRRATVASFLILAGLMVIANMFVPEGTQILCTAQAALGKGCLASSFICVYLFTGELYPTEIRQMGMGFASVHARLGGLTAPLVTTLGEYSTILPPVSFGATAILAGLAVCVLTETRNMPLVETIAAMERRVKEGSSKKHVEEKSEEISLQQLRASPLKETI

Annotated regions:
phrase: SPNSSIPGAATEGCKDGWVYNRSVFPSTIVMEWDLVCEARTLRDLAQSVYMAGVLVGAAVFGSLADRLGCKGPLVWSYLQLAASGAATAYFSSFSAYCVFRFLMGMTFSGIILNSVSLVVEWMPTRGRTVAGILLGYSFTLGQLILAGVAYLIRPWRCLQFAISAPFLIFFLYSWWLPESSRWLLLHGKSQLAVQNLQKVAAMNGRKEEGERLTKEVMSSYIQSEFASVCTSNSILDLFRTPAIRKVTCCLMVIWFSNSVAYYGLAMDLQKFGLSLYLVQALFGIINTPAMLVATATMIYVGRRATVASFLILAGLMVIANMFVPEGTQILCTAQAALGKGCLASSFICVYLFTGELYPTEIRQMGMGFASVHARLGGLTAPLVTTLGEYSTILPPVSFGATAILAGLAVCVLTETR
type: DOMAIN
name: MFS_dom
description: Major facilitator superfamily domain
Protein sequence:
MAKNLILWLVIAVVLMSVFQSFGPSESNGRKVDYSTFLQEVNQDQVREARINGREINVTKKDSNRYTTYIPINDPKLLDNLLTKNVKVVGEPPEEPSLLASIFISWFPMLLLIGVWIFFMRQMQGGGGKGAMSFGKSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRRVPLATDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFEKAKDKIMMGAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEEIIYGVEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEVKALIERNYNRARQILTDNMDILHAMKDALMKYETIDAPQIDDLMARREVRPPAGWEDPNGTNNSDSNGTPQAPRPVDEPRTPNPGNTMSEQLGDK

Annotated regions:
phrase: MVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLPEGDAISASRQKLESQISTLYGGRLAEEIIYGVEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEVKALIERNYNRARQILTDNMDILHAMKDALMKYETIDAPQID
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: IPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: DIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFE
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: VLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: IIVIAATNRPDVLDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: LILWLVIAVVLMSVFQSFGPSESNGRKVDYSTFLQEVNQDQVREARINGREINVTKKDSNRYTTYIPINDPKLLDNLLTKNVKVVGEP
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular
Protein sequence:
MKNINPSQTAAWQALQHHFDAMKEVQISELFAQDSDRFAHFSATFDDLMLVDYSKNRITTETMEKLHALARETDLSAAIQSMFAGEKINRTEDRAVLHVALRNRSNTPILVDGKDVMPEVNAVLAKMKDFSERVIGGEWKGYTGKTITDVVNIGIGGSDLGPFMVTEALKPYKNHLNMHFVSNVDGTHIAETLKPLNPETTLFLVASKTFTTQETMTNAHSARDWFLNTAKDEKHVAKHFAALSTNAKAVGEFGIDTNNMFEFWDWVGGRYSLWSAIGLSIILSLGFENFEKLLSGAHAMDKHFASTPAEKNLPVLLALIGIWYNNFFGAETEAILPYDQYMHRFAAYFQQGNMESNGKSADRNGNPVDYQTGPIIWGEPGTNGQHAFYQLIHQGTKLIPCDFIAPAVSHNPLSDHHSKLLSNFFAQTEALAFGKSRDVVEAEFAAAGKSAKDVEHVAPFKVFEGNRPTNSILLREITPYSLGALIALYEHKIFTQGAILNIFTFDQWGVELGKQLANRILPELENDSTIDSHDSSTNGLINRFKAWRN

Annotated regions:
phrase: NAVLAKMKDFSERVIGGEWKGYTGKTITDVVNIGIGGSDLGPFMVTEALKPYKNHLNMHFVSNVDGTHIAETLKPLNPETTLFLVASKTFTTQETMTNAHSARDWFLNTAKDEKHVAKHFAALSTNAKAVGEFGIDTNNMFEFWDWVGGRYSLWSAIGLSII
type: DOMAIN
name: SIS_PGI_1
description: Phosphoglucose isomerase, SIS domain 1

phrase: ETEAILPYDQYMHRFAAYFQQGNMESNGKSADRNGNPVDYQTGPIIWGEPGTNGQHAFYQLIHQGTKLIPCDFIAPAVSHNPLSDHHSKLLSNFFAQTEALAFGKSRDVVEAEFAAAGKSAKDVEHVAPFKVFEGNRPTNSILLREITPYSLGALIALYEHKIFTQGAILNIFTFDQWGVELGKQLANR
type: DOMAIN
name: SIS_PGI_2
description: Phosphoglucose isomerase, SIS domain 2

phrase: GAILNIFTFDQWGVELG
type: CONSERVED_SITE
name: Phosphoglucose_isomerase_CS
description: Phosphoglucose isomerase, conserved site

phrase: DWVGGRYSLWSAI
type: CONSERVED_SITE
name: Phosphoglucose_isomerase_CS
description: Phosphoglucose isomerase, conserved site
Protein sequence:
MAYKHILIAVDLSPESKVLVEKAVSMARPYNAKISLIHVDVNYSDLYTGLIDVNLGDMQKRISKETHHALTELSTNAGYPITETLSGSGDLGQVLVDAIKKYDMDLVVCGHHQDFWSKLMSSARQLINTVHVDMLIVPLRDEEE

Annotated regions:
phrase: YKHILIAVDLSPESKVLVEKAVSMARPYNAKISLIHVDVNYSDLYTGLIDVNLGDMQKRISKETHHALTELSTNAGYPITETLSGSGDLGQVLVDAIKKYDMDLVVCGHHQDFWSKLMSSARQLINTVHVDMLIV
type: DOMAIN
name: UspA
description: UspA
Protein sequence:
MSTNPKPQRKTKRNTNRRPQDVKFPGGGQIVGGVYLLPRRGPRLGVRATRKTSERSQPRGRRQPIPKARRPEGRTWAQPGYPWPLYGNEGMGWAGWLLSPRGSRPSWGPTDPRRRSRNLGKVIDTLTCGFADLMGYIPLVGAPLGGAARALAHGVRVLEDGVNYATGNLPGCSFSIFLLALLSCLTIPASAIEVRSVSGVYHVTNDCSNASIVYEAADMIMHTPGCVPCVRESNSSRCWVALTPTLAARNSSIPTTTIRRHVDLLVGTAAFCSAMYVGDLCGSVFLVSQLFTFSPRRHETVQDCNCSIYPGHVSGHRMAWDMMMNWSPTTALVVSQLLRIPQAVVDMVAGAHWGVLAGLAYYSMVGNWAKVLVVMLLFAGVDGTTYTTGGAQGRTASGLVNLFAPGPSQNIQLINTNGSWHINRTALNCNDSLKTGFLAALFYTQRFNASGCPERMASCRPIDKFDQGWGPITYARPPGLDQKPYCWHYAPQPCGIVPASQVCGPVYCFTPSPVVVGTTDRFGVPTYSWGENETDVLLLNNTRPPRGNWFGCTWMNSTGFTKTCGGPPCNIGGVGNNTLTCPTDCFRKHPEATYTKCGSGPWLTPRCMVDYPYRLWHYPCTLNFSIFKIRMYVGGVEHRLNAACNWTRGERCDLEDRDRSELSPLLLSTTEWQILPCSFTTLPALSTGLIHLHRNTVDVQYLYGVGSAVVSYAIKWEYVLLLFLFLADARVCACLWMMLLIAQAEAALENLVVLNAASVAGTHGILSF

Annotated regions:
phrase: STNPKPQRKTKRNTNRRPQDVKFPGGGQIVGGVYLLPRRGPRLGVRATRKTSERSQPRGRRQPIPKARRPEGRTWAQPGYPWPLYGNEGMGWAGWLLSPRGSRPSWGPTDPRR
type: DOMAIN
name: HCV_core_N
description: Hepatitis C virus, Core protein, N-terminal

phrase: EVRSVSGVYHVTNDCSNASIVYEAADMIMHTPGCVPCVRESNSSRCWVALTPTLAARNSSIPTTTIRRHVDLLVGTAAFCSAMYVGDLCGSVFLVSQLFTFSPRRHETVQDCNCSIYPGHVSGHRMAWDMMMNWSPTTALVVSQLLRIPQAVVDMVAGAHWGVLAGLAYYSMVGNWAKVLVVMLLFAGV
type: DOMAIN
name: HCV_Env
description: Hepatitis C virus, Envelope glycoprotein E1

phrase: TTGGAQGRTASGLVNLFAPGPSQNIQLINTNGSWHINRTALNCNDSLKTGFLAALFYTQRFNASGCPERMASCRPIDKFDQGWGPITYARPPGLDQKPYCWHYAPQPCGIVPASQVCGPVYCFTPSPVVVGTTDRFGVPTYSWGENETDVLLLNNTRPPRGNWFGCTWMNSTGFTKTCGGPPCNIGGVGNNTLTCPTDCFRKHPEATYTKCGSGPWLTPRCMVDYPYRLWHYPCTLNFSIFKIRMYVGGVEHRLNAACNWTRGERCDLEDRDRSELSPLLLSTTEWQILPCSFTTLPALSTGLIHLHRNTVDVQYLYGVGSAVVSYAIKWEYVLLLFLFLAD
type: DOMAIN
name: HCV_NS1
description: Hepatitis C virus, Non-structural protein E2/NS1

phrase: SRNLGKVIDTLTCGFADLMGYIPLVGAPLGGAARALAHGVRVLEDGVNYATGNLPGCSFSIFLLALLSCLTIPA
type: DOMAIN
name: HCV_Core_C
description: Hepatitis C virus, Core protein, C-terminal
Protein sequence:
MAQKDNQKEMNDQLKVRREKMQFLKDEGIDPFGSRFERTHLAAALHEEFEAIEKDDLDVKNQEVTIAGRMMSKRGKGKVGFADIRDRSGKIQIYVRKDEVGEDNYKIFKKADLGDHLGITGQIMKTDMGELTVKATHLTFLSKALRPLPDKYHGLTNVEQIYRQRYLDLIANPESMDRFTKRSKIISAVREYLDTHDFTEVETPVLHGQAGGASARPFITHHNALDINLYLRIALELHLKRLIVGGMERVYEIGRVFRNEGIDTKHNPEFTMLETYAAYFDYKDVMDETEGIIRFAAHKVLGTGQISYQGQAIDLDSDFARVHMVDAIKAETGVDFWQPMTVESARELADQHHVKYEEYWQVGHIINAFFEEFVEDTLVQPTFIYGHPVEISPLAKKNAEDDRFTDRWELFMHGNEYANAFTELNDPIDQRERFEAQAKERENGNDEAEGIDEDYVEALEYGMPPTGGLGIGIDRLVMLLTDAASIRDVLLFPTMRPDKQENEEI

Annotated regions:
phrase: EVTIAGRMMSKRGKGKVGFADIRDRSGKIQIYVRKDEVGEDNYKIFKKADLGDHLGITGQIMKTDMGELTVKATHLTFLSKALRPLPDKYHGLTNVEQIYRQRYLD
type: DOMAIN
name: Lys-tRNA-ligase_II_N
description: Lysine-tRNA ligase, class II, N-terminal

phrase: DTHDFTEVET
type: DOMAIN
name: Lys-tRNA-synth_II_C
description: Lysyl-tRNA synthetase, class II, C-terminal

phrase: AGGASARPFITHHNAL
type: DOMAIN
name: Lys-tRNA-synth_II_C
description: Lysyl-tRNA synthetase, class II, C-terminal

phrase: LKRLIVGGMERVY
type: DOMAIN
name: Lys-tRNA-synth_II_C
description: Lysyl-tRNA synthetase, class II, C-terminal

phrase: FRNEGIDTKHNPEFTML
type: DOMAIN
name: Lys-tRNA-synth_II_C
description: Lysyl-tRNA synthetase, class II, C-terminal

phrase: QPTFIYGHPVEISPLA
type: DOMAIN
name: Lys-tRNA-synth_II_C
description: Lysyl-tRNA synthetase, class II, C-terminal

phrase: VTIAGRMMSKRGKGKVGFADIRDRSGKIQIYVRKDEVGEDNYKIFKKADLGDHLGITGQIMKTDMGELTVKATHL
type: DOMAIN
name: NA-bd_OB_tRNA
description: OB-fold nucleic acid binding domain, AA-tRNA synthetase-type

phrase: EQIYRQRYLDLIANPESMDRFTKRSKIISAVREYLDTHDFTEVETPVLHGQAGGASARPFITHHNALDINLYLRIALELHLKRLIVGGMERVYEIGRVFRNEGIDTKHNPEFTMLETYAAYFDYKDVMDETEGIIRFAAHKVLGTGQISYQGQAIDLDSDFARVHMVDAIKAETGVDFWQPMTVESARELADQHHVKYEEYWQVGHIINAFFEEFVEDTLVQPTFIYGHPVEISPLAKKNAEDDRFTDRWELFMHGNEYANAFTELNDPIDQRERFEAQAKERENGNDEAEGIDEDYVEALEYGMPPTGGLGIGIDRLVMLLTDAASIRDVLLFPT
type: DOMAIN
name: Aa-tRNA-synt_II
description: Aminoacyl-tRNA synthetase, class II (D/K/N)

phrase: NPESMDRFTKRSKIISAVREYLDTHDFTEVETPVLHGQAGGASARPFITHHNALDINLYLRIALELHLKRLIVGGMERVYEIGRVFRNEGIDTKHNPEFTMLETYAAYFDYKDVMDETEGIIRFAAHKVLGTGQISYQGQAIDLDSDFARVHMVDAIKAETGVDFWQPMTVESARELADQHHVKYEEYWQVGHIINAFFEEFVEDTLVQPTFIYGHPVEISPLAKKNAEDDRFTDRWELFMHGNEYANAFTELNDPIDQRERFEAQAKERENGNDEAEGIDEDYVEALEYGMPPTGGLGIGIDRLVMLLTDAASIRDVLLFPTMR
type: DOMAIN
name: Lys-tRNA-synth_II_C
description: Lysyl-tRNA synthetase, class II, C-terminal

phrase: RSKIISAVREYLDTHDFTEVETPVLHGQAGGASARPFITHHNALDINLYLRIALELHLKRLIVGGMERVYEIGRVFRNEGIDTKHNPEFTMLETYAAYFDYKDVMDETEGIIRFAAHKVLGTGQISYQGQAIDLDSDFARVHMVDAIKAETGVDFWQPMTVESARELADQHHVKYEEYWQVGHIINAFFEEFVEDTLVQPTFIYGHPVEISPLAKKNAEDDRFTDRWELFMHGNEYANAFTELNDPIDQRERFEAQAKERENGNDEAEGIDEDYVEALEYGMPPTGGLGIGIDRLVMLLTDAASIRDVLLFPTMR
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II
Protein sequence:
MMTRVECFNPHRWIILHVAIIIQSKANAQSFSPSPPDLQTGHTPSKTTVFAVLVTLFFLTGLLSVYIRHCARSNPDSSTRYFRNRANDGSSRRGGLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVCRSNLTAKSNKPGDEDDGVPLAAMRDHVVVDIETVEVAKSHHRRLSSEISGKFPRSNSTGHSMDRFSDGTERFTLRLPDDVKMRLMAVKGRRLKRTRSFDVDLTAEHYCRSGEESSNTIGSGAKSGRVNWPDRWGLTLFVSKSNSGSVRSQKSNGEPLK

Annotated regions:
phrase: ECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVC
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: CAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPV
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: CAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPVC
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type
Protein sequence:
MHAYRSHTCAELNAGHVGQEVRLSGWVHRVRDHGGVLFIDLRDHYGITQVIADADSPAFAELETVRAEWVIRIEGRVKGRDAALVNPKLATGEIEVYATGLTVLGAADELPMPVFGEVDYPEETRLTYRFLDLRREKLHANMMLRSNVVRSLRNRMWDAGFNEFQTPIITASSPEGARDFLVPSRLHPGKFYALPQAPQQFKQLIMVAGFDRYFQIAPCFRDEDPRADRSPTDFYQLDVEMSFVEQEDVFRAVQPVIRGIFEEFGGGRRVDADWPRIAYRDAMLWYGSDKPDLRNPIKMQVVSEHFRGSGFAIFAKLLENEGTEIRAIPAPTGGSRKFCDRMNAFAQSQGLPGMGYIFWRKGDDGAMEAAGPLAKNIGPERTEAIRQQLGLGEGDAAFFLGGKPETFEAVAGRARNEIGRELGLTEENCFRFAWIVDFPMYEKDDEGKVDFSHNPFSMPQGGMAALEGDPLKVLAYQYDLACNGYELISGGIRNHKPEIMFKAFELAGYPASEVEKRFGGMVKAFRYGAPPHGGCAAGIDRIVMLLADEANIREVIMFPMNQRAEDLLMGAPSEPTNEQLRELRLRVVPKD

Annotated regions:
phrase: AKLLENEGTEIRAIPAPTGGSRKFCDRMNAFAQSQGLPGMGYIFWRKGDDGAMEAAGPLAKNIGPERTEAIRQQLGLGEGDAAFFLGGKPET
type: DOMAIN
name: GAD_dom
description: GAD domain

phrase: VRLSGWVHRVRDHGGVLFIDLRDHYGITQVIADADSPAFAELETVRAEWVIRIEGRVKGRDAALVNPKLATGEIEVYATGLTV
type: DOMAIN
name: NA-bd_OB_tRNA
description: OB-fold nucleic acid binding domain, AA-tRNA synthetase-type

phrase: LRSNVVRSLRNRMWDAGFNEFQTPIITASSPEGARDFLVPSRLHPGKFYALPQAPQQFKQLIMVAGFDRYFQIAPCFRDEDPRADRSPTDFYQLDVEMSFVEQEDVFRAVQPVIRGIFEEFGGGRRVDADWPRIAYRDAMLWYGSDKPDLRNPIKMQVVSEHFRGSGFAIFAKLLENEGTEIRAIPAPTGGSRKFCDRMNAFAQSQGLPGMGYIFWRKGDDGAMEAAGPLAKNIGPERTEAIRQQLGLGEGDAAFFLGGKPETFEAVAGRARNEIGRELGLTEENCFRFAWIVDFPMYEKDDEGKVDFSHNPFSMPQGGMAALEGDPLKVLAYQYDLACNGYELISGGIRNHKPEIMFKAFELAGYPASEVEKRFGGMVKAFRYGAPPHGGCAAGIDRIVMLLADEANIREVIMF
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: RSHTCAELNAGHVGQEVRLSGWVHRVRDHGGVLFIDLRDHYGITQVIADADSPAFAELETVRAEWVIRIEGRVKGRDAALVNPKLATGEIEVYATGLTVLGAADELPMPVFGEVDYPEETRLTYRFLDLRREK
type: DOMAIN
name: Asp-tRNA-ligase_1_N
description: Aspartate-tRNA ligase, type 1, anticodon recognition domain

phrase: EETRLTYRFLDLRREKLHANMMLRSNVVRSLRNRMWDAGFNEFQTPIITASSPEGARDFLVPSRLHPGKFYALPQAPQQFKQLIMVAGFDRYFQIAPCFRDEDPRADRSPTDFYQLDVEMSFVEQEDVFRAVQPVIRGIFEEFGGGRRVDADWPRIAYRDAMLWYGSDKPDLRNPIKMQVVSEHFRGSGFAIFAKLLENEGTEIRAIPAPTGGSRKFCDRMNAFAQSQGLPGMGYIFWRKGDDGAMEAAGPLAKNIGPERTEAIRQQLGLGEGDAAFFLGGKPETFEAVAGRARNEIGRELGLTEENCFRFAWIVDFPMYEKDDEGKVDFSHNPFSMPQGGMAALEGDPLKVLAYQYDLACNGYELISGGIRNHKPEIMFKAFELAGYPASEVEKRFGGMVKAFRYGAPPHGGCAAGIDRIVMLLADEANIREVIMFPMN
type: DOMAIN
name: Aa-tRNA-synt_II
description: Aminoacyl-tRNA synthetase, class II (D/K/N)
Protein sequence:
MHSKDIHIAIVGATGAAGGTALEILFERNHPADKITLMASERSAGKIIQYGVSELTVIHATEDAFEGIDVALFAAGGYVSRRLAHKAVEKGVFVIDKGSIFRMEPTIPLVVPEVNANDIDWHPGIVSTPNCTSTPLVMVLDALRSISKITAVTVATYQSVTGTGVAANDELLEQSRTVLDGGEANPNVYPHEIAFNVLPHVDDFLEDGYTKEEQKMLNESRKILHDDKLSISATCVRVPVQVSHSECVQIEFKSEVSLEDAKRVLADYDGMKVVDDPAKNEYPMPLRAAGRNEVLVGRIRKDTAHKHGIVLWLSCDNLRKGAALNALQIMDEAVNRGALEPLSKR

Annotated regions:
phrase: IAIVGATGAAGGTALEILFERNHPADKITLMASERSAGKIIQYGVSELTVIHATEDAFEGIDVALFAAGGYVSRRLAHKAVEKGVFVIDKGSIFRMEPTIPLVVPEVNANDI
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: LRSISKITAVTVATYQSVTGTGVAANDELLEQSRTVLDGGEANPNVYPHEIAFNVLPHVDDFLEDGYTKEEQKMLNESRKILHDDKLSISATCVRVPVQVSHSECVQIEFKSEVSLEDAKRVLADYDGMKVVDDPAKNEYPMPLRAAGRNEVLVGRIRKDTAHKHGIVLWLSCDNLR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: ISATCVRVPVQVSH
type: CONSERVED_SITE
name: Asp-semialdehyde_DH_CS
description: Aspartate-semialdehyde dehydrogenase, conserved site

phrase: HIAIVGATGAAGGTALEILFERNHPADKITLMASERSAGKIIQYGVSELTVIHATEDAFEGIDVALFAAGGYVSRRLAHKAVEKGVFVIDKGSIFRMEPTIPLVVPEVNANDIDW
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MSGLIQAAKSLLLLEFVDAFFLAMRQFFSPKPTINYPYEKGFVSHRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVEAIVEGPNFEFATEMREELYYDKEKLLLNGDRWEREIARNILMDAPYR

Annotated regions:
phrase: VRYDIDMVKCIYCGFCQEACPVEAIVEGP
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: RCIACKLCEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVE
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: CIYCGFCQEAC
type: CONSERVED_SITE
name: 4Fe4S_Fe_S_CS
description: 4Fe-4S ferredoxin, iron-sulphur binding, conserved site

phrase: LRRYPNGEERCIACKLCEAICPAQAITIEA
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain
Protein sequence:
MEEGMNVLHDFGIQSTHYLQVNYQDSQDWFILVSVIADLRNAFYVLFPIWFHLQEAVGIKLLWVAVIGDWLNLVFKWILFGQRPYWWVLDTDYYSNTSVPLIKQFPVTCETGPGSPSGHAMGTAGVYYVMVTSTLSIFQGKIKPTYRFRCLNVILWLGFWAVQLNVCLSRIYLAAHFPHQVVAGVLSGIAVAETFSHIHSIYNASLKKYFLITFFLFSFAIGFYLLLKGLGVDLLWTLEKAQRWCEQPEWVHIDTTPFASLLKNLGTLFGLGLALNSSMYRESCKGKLSKWLPFRLSSIVASLVLLHVFDSLKPPSQVELVFYVLSFCKSAVVPLASVSVIPYCLAQVLGQPHKKSL

Annotated regions:
phrase: IKLLWVAVIGDWLNLVFKWILFGQRPYWWVLDTDYYSNTSVPLIKQFPVTCETGPGSPSGHAMGTAGVYYVMVTSTLSIFQGKIKPTYRFRCLNVILWLGFWAVQLNVCLSRIYLAAHFPHQVVAGVLSGIAVAETFSH
type: DOMAIN
name: P_Acid_Pase_2/haloperoxidase
description: Phosphatidic acid phosphatase type 2/haloperoxidase

phrase: VGIKLLWVAVIGDWLNLVFKWILFGQRPYWWVLDTDYYSNTSVPLIKQFPVTCETGPGSPSGHAMGTAGVYYVMVTSTLSIFQGKIKPTYRFRCLNVILWLGFWAVQLNVCLSRIYLAAHFPHQVVAGVLSGIAVAETF
type: DOMAIN
name: P_Acid_Pase_2/haloperoxidase
description: Phosphatidic acid phosphatase type 2/haloperoxidase
Protein sequence:
MAQVINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDTLNVQQKYKVSDTAATVTGYTDSATAIDKSTFAASATTLGGTPAITGDLKFDDTTGKYYADVSGTTAKDGVYEVTVAADGKVTLTGTPTGPITAGFPSTATKDVKQTQQENADLTEAKAALTAAGVAAAGHRSVVKMSYTDNNGKTIDGGLAVKVGDDYYSATQNKDGSISINTTKYTADNGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGHNFKAQPDLAEAAATTTENPLQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSLLR

Annotated regions:
phrase: INTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAQTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDN
type: DOMAIN
name: Flagellin_N
description: Flagellin, N-terminal domain

phrase: RINSAKDDAAGQAIANR
type: DOMAIN
name: Flagellin_N
description: Flagellin, N-terminal domain

phrase: QTTEGALNEINNNLQRVRE
type: DOMAIN
name: Flagellin_N
description: Flagellin, N-terminal domain

phrase: SIQAEITQRLNEIDRVSGQTQFN
type: DOMAIN
name: Flagellin_N
description: Flagellin, N-terminal domain

phrase: TTKYTADNGTSKTALNKLGGADGKTEVVSIGGKTYAASKAEGH
type: DOMAIN
name: FLIC_barrel
description: Flagellin, barrel domain

phrase: TDSATAIDKSTFAASATTLGGTPAITGDLKFDDTTGKYYADVSGTTAKDGVYEVTVAADGKVTLTGTPTGPITAGFPSTATKDVK
type: DOMAIN
name: Flagellin_D3
description: Flagellin D3

phrase: LQKIDAALAQVDTLRSDLGAVQNRFNSAITNLGNTVNNLTSARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSL
type: DOMAIN
name: Flagellin_C
description: Flagellin, C-terminal domain