nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MGKKRGKDRSSRGEDDDIELAVPSCRHIKTAADQSLLKKLPGISDWTNCQDCKHEENQENDDTTLQQDSEEEKEPAGIWMCLTCGHRGCGRNSENQHAIKHYETPRSSPHCLVISLDNWSVWCYICDNDVQYSRTGYLAQLVTNIKKQNAADPAKRPEKSKKQTTVYFILKENNSTRYKNKNSMKESAGKTQNCITTEGSTVIPVKGLSNLGNTCFFNAVIQNLSQTQLLRETLNKVTGENLNLDIKPASLDLVNLSXXXXVNLEQPGSLTWAMCHLLNEIQLSKKSVVTPRELFTQVCKKAARFKGFQQQDSQELLRYLLDGMRAEEQKRVSTGIMEALKLTNTEKDGDGLKTLAKEYEKNRLPKNFVDQVFGGEMTSTIMCQQCKTVSVVTEMFLDLSLPVVDEAYRKKNQRKGAQKSSESSQDGRNSPPSDSRNDDIPIAGTSKYQQKKAKKQAKKQAKHQKRQQKLESRITLDSLTENEQTNATVDAEEAETNNEEQEGTSANDPTPDATSVSEQDKSGEQEEEEEDDDIADCDSLATSSSVSNRFTVLSDERDSQDRILPDKMSNGDQEEEDDSQLVSEMEKVTLDEAFLEDCEAVDQNTESEEDVPDAKEYTVVNQDPELAFSTLAPRTAPEKQECSIQTCLFQFTEVETLTLTNSLLCLTCTKQQQKKARGPGPKKNVYTDALKQMLVSSPPAVLTLHLKRFQQNGFTICKVNRYVHFPLTLDLAPYCAAKCKTNIVNAGVLYSLYGVVEHSGTMRSGHYT

Annotated regions:
phrase: GLSNLGNTCFFNAVI
type: CONSERVED_SITE
name: USP_CS
description: Ubiquitin specific protease, conserved site

phrase: YSLYGVVEHSGTMRSGH
type: CONSERVED_SITE
name: USP_CS
description: Ubiquitin specific protease, conserved site

phrase: CQDCKHEENQENDDTTLQQDSEEEKEPAGIWMCLTCGHRGCGRNSENQHAIKHYETPRSSPHCLVISLDNWSVWCYICDNDVQ
type: DOMAIN
name: Znf_UBP
description: Zinc finger, UBP-type

phrase: GLSNLGNTCFFNAVIQNLSQTQLLRETLNKVTGENLNLDIKPASLDLVNLSXXXXVNLEQPGSLTWAMCHLLNEIQLSKKSVVTPRELFTQVCKKAARFKGFQQQDSQELLRYLLDGMRAEEQKRVSTGIMEALKLTNTEKDGDGLKTLAKEYEKNRLPKNFVDQVFGGEMTSTIMCQQCKTVSVVTEMFLDLSLPVVDEAYRKKNQRKGAQKSSESSQDGRNSPPSDSRNDDIPIAGTSKYQQKKAKKQAKKQAKHQKRQQKLESRITLDSLTENEQTNATVDAEEAETNNEEQEGTSANDPTPDATSVSEQDKSGEQEEEEEDDDIADCDSLATSSSVSNRFTVLSDERDSQDRILPDKMSNGDQEEEDDSQLVSEMEKVTLDEAFLEDCEAVDQNTESEEDVPDAKEYTVVNQDPELAFSTLAPRTAPEKQECSIQTCLFQFTEVETLTLTNSLLCLTCTKQQQKKARGPGPKKNVYTDALKQMLVSSPPAVLTLHLKRFQQNGFTICKVNRYVHFPLTLDLAPYCAAKCKTNIVNAGVLYSLYGVVEHSGTMRSGHY
type: DOMAIN
name: Peptidase_C19_UCH
description: Peptidase C19, ubiquitin carboxyl-terminal hydrolase

phrase: PSCRHIKTAADQSLLKKLPGISDWTNCQDCKHEENQENDDTTLQQDSEEEKEPAGIWMCLTCGHRGCGRNSENQHAIKHYETPRSSPHCLVISLDNWSVWCYICDNDVQYSRTGYLAQLVTNIKKQ
type: DOMAIN
name: Znf_UBP
description: Zinc finger, UBP-type

phrase: KGLSNLGNTCFFNAVIQNLSQTQLLRETLNKVTGENLNLDIKPASLDLVNLSXXXXVNLEQPGSLTWAMCHLLNEIQLSKKSVVTPRELFTQVCKKAARFKGFQQQDSQELLRYLLDGMRAEEQKRVSTGIMEALKLTNTEKDGDGLKTLAKEYEKNRLPKNFVDQVFGGEMTSTIMCQQCKTVSVVTEMFLDLSLPVVDEAYRKKNQRKGAQKSSESSQDGRNSPPSDSRNDDIPIAGTSKYQQKKAKKQAKKQAKHQKRQQKLESRITLDSLTENEQTNATVDAEEAETNNEEQEGTSANDPTPDATSVSEQDKSGEQEEEEEDDDIADCDSLATSSSVSNRFTVLSDERDSQDRILPDKMSNGDQEEEDDSQLVSEMEKVTLDEAFLEDCEAVDQNTESEEDVPDAKEYTVVNQDPELAFSTLAPRTAPEKQECSIQTCLFQFTEVETLTLTNSLLCLTCTKQQQKKARGPGPKKNVYTDALKQMLVSSPPAVLTLHLKRFQQNGFTICKVNRYVHFPLTLDLAPYCAAKCKTNIVNAGVLYSLYGVVEHSGTMRSGHY
type: DOMAIN
name: USP_dom
description: Ubiquitin specific protease domain

phrase: NCQDCKHEENQENDDTTLQQDSEEEKEPAGIWMCLTCGHRGCGRNSENQHAIKHYETPRSSPHCLVISLDNWS
type: DOMAIN
name: Znf_UBP
description: Zinc finger, UBP-type
Protein sequence:
MGKYFGTDGVRGEANVELTPELAFKLGRFGGYVLSQHETERPKVFVARDTRISGEMLESALIAGLLSVGIEVYKLGVLATPGVSYLVRTEKASAGVMISASHNPALDNGIKFFGNDGFKLADDQELEIEALLDAPEDTLPRPSAEGLGTLVDYPEGLRKYEKFLVTTGTDLSGMTVALDTANGAASVSARDVFLDLNAEIAVIGEKPNGLNINDGVGSTRPEQLQELVKETGADLGLAFDGDSDRLIAVDETGEIVDGDRIMFIIGKYLSEKGLLAHNTIVTTVMSNLGFHKALDKQGINKAITAVGDRYVVEEMRSSGYNLGGEQSGHVIIMDYNTTGDGQLTAIQLAKVMKETGKSLSELAAEVTIYPQKLVNIRVENSMKERAMEVPAIANIIAKMEDEMAGNGRILVRPSGTEPLLRVMAEAPTDAEVDYYVDTIADVVRTEIGCDN

Annotated regions:
phrase: LVNIRVENSMKERAMEVPAIANIIAKMEDEMAGNGRILVRPSGTEPLLRVMAEAPTDAEVDYYVDTIA
type: DOMAIN
name: A-D-PHexomutase_C
description: Alpha-D-phosphohexomutase, C-terminal

phrase: DLSGMTVALDTANGAASVSARDVFLDLNAEIAVIGEKPNGLNINDGVGSTRPEQLQELVKETGADLGLAFDGDSDRLIAVDET
type: DOMAIN
name: A-D-PHexomutase_a/b/a-II
description: Alpha-D-phosphohexomutase, alpha/beta/alpha domain II

phrase: DGDRIMFIIGKYLSEKGLLAHNTIVTTVMSNLGFHKALDKQGINKAITAVGDRYVVEEMRSSGYNLGGEQSGHVIIMDYNTTGDGQLTAIQLAKVMKETGKSLSELAA
type: DOMAIN
name: A-D-PHexomutase_a/b/a-III
description: Alpha-D-phosphohexomutase, alpha/beta/alpha domain III

phrase: GVMISASHN
type: CONSERVED_SITE
name: A-D-PHexomutase_CS
description: Alpha-D-phosphohexomutase, conserved site

phrase: KYFGTDGVRGEANVELTPELAFKLGRFGGYVLSQHETERPKVFVARDTRISGEMLESALIAGLLSVGIEVYKLGVLATPGVSYLVRTEKASAGVMISASHNPALDNGIKFFGNDGFKLADDQELEIEALLD
type: DOMAIN
name: A-D-PHexomutase_a/b/a-I
description: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I
Protein sequence:
MFNEILKKVDWHGNVLSLSTGKIARNADGAVLASMGNTSVLCTVVFDKNTKKDMDFFPLGVYYREMAYAAGKIPGGFIKKEGKFSEYEVLVSRLIDRSIRPLFDSNFRNDTQIICTVMSYDPRYSPDILAIIGSSAALAISGIPIVKPIGAARVGIVNDEFILNPVIHDNTGVNELDLVVAATFDSVTMIEAQACEIDEEKMLAAIEFGYKSLKPVINAIEEIKSSIRKDIFEVTARPHLRYNDEILKHFSSDIKSALLLQTKNERNQQLQLIQQKVIDYFSSKANSEANDGDDILNIEKALDDAKSKIFRDLVLQNKTRIGNRAVDEIRPIICEAGLFNTVHGSALFTRGDTQSLATITLGSSTDEQIVEQLNKCERQNFLLDYIFLPYSVGEISPLRAASRREIGHGWLAKKAIQLVIPSKDVFPYTIRIVSEITQSDGSSSMATVCSASLSLMEAGVPIKTHVAGIAMGLVLGEGNKFEILSDISGCEDHLGDMDFKVASTKNGITALQLDIKVQGINLSMIESTFRQAKIGINHILNVMNNTISCPKSELSTYAPMVQTLEIQKEKIRDVIGLGGKVIKELCKTFDVEIDISENGEVKVWGNVGENVKKAVQSIENIVFVPQIGDIFDGEVVKVIESGAFIKYVTGRDGFVHISEINDTHIKDINAHVKLGDKVKVKIIGIDHKNRVKLTLRTDKEHCKNKNEQYNDITTTTGGVKKKIKIAPKEAAVISNRKYFD

Annotated regions:
phrase: PQIGDIFDGEVVKVIESGAFIKYVTGRDGFVHISEINDTHIKDINAHVKLGDKVKVKIIGIDHKNRVKLT
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: APMVQTLEIQKEKIRDVIGLGGKVIKELCKTFDVEIDISENGEVKVWGNVGENVKKAVQSIENIV
type: DOMAIN
name: KH_dom
description: K Homology domain

phrase: PIGAARVGIVNDEFILNPVIHDNTGVNELDLVVAATFDSVTMIEAQACEIDEEKMLAAIEFGY
type: DOMAIN
name: ExoRNase_PH_dom2
description: Exoribonuclease, phosphorolytic domain 2

phrase: GDIFDGEVVKVIESGAFIKYVTGRDGFVHISEINDTHIKDINAHVKLGDKVKVKIIGIDHKNRVKLTL
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: QTLEIQKEKIRDVIGLGGKVIKELCKTFDVEIDISENGEVKVWGNVGENVKKAVQSI
type: DOMAIN
name: KH_dom_type_1
description: K Homology domain, type 1

phrase: QIGDIFDGEVVKVIESGAFIKYVTGRDGFVHISEINDTHIKDINAHVKLGDKVKVKIIGIDHKNRVKLTL
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: SLSTGKIARNADGAVLASMGNTSVLCTVVFDKNTKKDMDFFPLGVYYREMAYAAGKIPGGFIKKEGKFSEYEVLVSRLIDRSIRPLFDSNFRNDTQIICTVMSYDPRYSPDILAIIGSSAALAISGI
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1

phrase: EIRPIICEAGLFNTVHGSALFTRGDTQSLATITLGSSTDEQIVEQLNKCERQNFLLDYIFLPYSVGEISPLRAASRREIGHGWLAKKAIQLVIPSKDVFPYTIRIVSEITQSDGSSSMATVCSASLSLMEAGV
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1

phrase: DEILKHFSSDIKSALLLQTKNERNQQLQLIQQKVIDYFSSKANSEANDGDDILNIEKALDDAKSKIFRDLVLQNKTRI
type: DOMAIN
name: PNPase_PH_RNA-bd_bac/org-type
description: Polyribonucleotide nucleotidyltransferase, RNA-binding domain
Protein sequence:
MTPLLELKDIRRSYPAGDEQVEVLKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLTAEQNVEVPAVYAGLERKQRLLRAQELLQRLGLEDRTEYYPAQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRDGEIVRNPPAVEKVNATGGTEPVVNTASGWRQFVSGFNEALTMAWRALAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTNTIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASANGVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMPARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLTRLLSLRHGKKDFFTWNMDGVLKTVEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGITLSLLIAFTLQLFLPGWEIGFSPLALLLAFLCSTVTGILFGWLPARNAARLDPVDALARE

Annotated regions:
phrase: LELKDIRRSYPAGDEQVEVLKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLTAEQNVEVPAVYAGLERKQRLLRAQELLQRLGLEDRTEYYPAQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRDGE
type: DOMAIN
name: MacB-like_ATP-bd
description: MacB-like, ATP-binding domain

phrase: LVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGITLSLLIAFTLQLFLPGWEIGFSPLALLLAFLCSTVTGILFGWLPARNAARLD
type: DOMAIN
name: ABC3_permease_C
description: ABC3 transporter permease, C-terminal

phrase: LELKDIRRSYPAGDEQVEVLKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLTAEQNVEVPAVYAGLERKQRLLRAQELLQRLGLEDRTEYYPAQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRDGEIVRNPPAVEKVNATGGTEPVVN
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTNTIDVYPGKDFGDDDPQYQQALKYDDLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASANGVSGDYFNVYGMTFSEGNTFNQEQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMPARVIGVAEEKQSMFGSSKVLRVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLT
type: DOMAIN
name: MacB_PCD
description: MacB-like periplasmic core domain

phrase: LSGGQQQRVSIARA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: AGEMVAIVGASGSGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLTAEQNVEVPAVYAGLERKQRLLRAQELLQRLGLEDRTEYYPAQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRDG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLTAEQNVEVPAVYAGLERKQRLLRAQELLQRLGLEDRTEYYPAQLSGGQQQRVSIARALMNGGQVILADEP
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain
Protein sequence:
MDSYEKEESVASTSGIQDLQTLSELVGPENAGEGELTIAEEPEENPRRPRRYTKREVKCVSYHAYKEIEDKHPQHIKLQDWIPTPEEMSKSLCKRLILCGLYSAEKASEILRMPFTVSWEQSDTDPDCFIVSYTCIFCDAVIHDPMPIRWDPEVGIWVKYKPLRGIVGSAVFIMHKHQRNCSLVKPSTSCSEGPKPRPRHDPVLRCDMFEKHHKPRQKRPRRRSIDNESCASSSDTMANEPGSLCTNPLWNPGPLLSGLLEESSNLPNLEVHMSGGPFWEEVYGDSILGPPSGSGEHSVL

Annotated regions:
Protein sequence:
MEQEFVKALPILHHLMKAGHQAYFVGGAVRDSYMKRKIGDVDIATSASPNEVERLFKRTVDVGKEHGTVIVLWEDETYEVTTFRAESEYKDYRRPEAVRFITSLSEDLKRRDLTINAMAMSAEGELLDYFGGAHDIGQKLIRTVGNPEDRFREDALRMMRAVRFMSQLGFLLEKETREAVIKDRELLAHVSVERKTVEFEKLLQGASSQEAIQTMVQTGLIQELPGLSGYEQQMLEASGFPFSSLDAREERWAALLLFLGLCPKSAEAFLKQWKLPGKVIKKAMQIISVYPAQLEAEAMYRAGEALFSAVKIGMLKKHKTIDEQKLKEVQSLYEQLPIKSLRDLDISGADLMELRNRRAGKWVAEELRRIEEAVLAGKLPNRKHDIKEWLASWDQH

Annotated regions:
phrase: GFLLEKETREAVIKDRELLAHVSVERKTVEFEKLLQGASSQEAIQTMVQTGLIQELPG
type: DOMAIN
name: PolyA_RNA-bd
description: tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain

phrase: LDAREERWAALLLFLGLCPKSAEAFLKQWKLPGKVIKKAMQIISVYPAQLEAEAMYRAGEALFSAVKIGMLKKHKTIDEQKLKEVQSLYEQLPIKSLRDLDISGADLMELRNRRAGKWVAEELRRIEEAVLAGKLPNRKHDIKE
type: DOMAIN
name: CCA-adding_enz_C
description: CCA-adding enzyme, C-terminal

phrase: AYFVGGAVRDSYMKRKIGDVDIATSASPNEVERLFKRTVDVGKEHGTVIVLWEDETYEVTTFRAESEYKDYRRPEAVRFITSLSEDLKRRDLTINAMAMSAEGELLDYFGGAHDIGQKLI
type: DOMAIN
name: PolA_pol_head_dom
description: Poly A polymerase, head domain

phrase: KALPILHHLMKAGHQAYFVGGAVRDSYMKRKIGDVDIATSASPNEVERLFKRTVDVGKEHGTVIVLWEDETYEVTTFRAESEYKDYRRPEAVRFITSLSEDLKRRDLTINAMAMSAEGELLDYFGGAHD
type: DOMAIN
name: PolA_pol_head_dom
description: Poly A polymerase, head domain
Protein sequence:
MGSKCSKSKVAGWPEIRERIRQTSPNSPAEGVGAASQDLARHGAITSSNTAQTNPTCAWLEAQQDDDSEVGFPVRPQVPLRPMTYKGAFDLGFFLKEKGGLDGLIHSQKRQDILDLWVYNTQGYFPDWQNYTPGPGTRLPLTFGWCFKLVPIDPTEVEEANKGENNSLLHPICQHGMDDADGEVLVWRFDSSLARKHIARELYPDYYKN

Annotated regions:
Protein sequence:
MSKKRLYEIAKELGKESKEVVARAKELGLDVKSHSSSVEEAVAAKIAASFKPAAAPKVEAKPAAPKVSAEKKAEKSEPAKPAVAKEEAKPAEPVAPKTEKVAVKPQSRNFKAEREARAKEQAERRKQNKGNNRDQQQNGNRQKNDGRNGGKQGQSNRDNRRFNDQAKKQQGQQKRRNERRQQEDKRSNQAAPRIDFKARAAALKAEQNAEYARSSEERFKQYQAAKEALAQANKRKEPEEIFEEAAKLAEQAQQVQAVVEVVPEKKEPAVDTRRKKQARPDKNRDDYDHEEDGPRKQQKNRSSQNQVRNQKNSNWNNNKKNKKGNNKNNRNQTPKPVTERKFHELPTEFEYTDGMTVAEIAKRIKREPAEIVKKLFMMGVMATQNQSLDGETIELLMVDYGIEAKQKVEVDNADIERFFVEDGYLNEDELVERPPVVTIMGHVDHGKTTLLDTLRNSRVATGEAGGITQHIGAYQIVENGKKITFLDTPGHAAFTSMRARGASVTDITILVVAADDGVMPQTIEAINHSKAANVPIIVAINKIDKPGANPERVIGELAEHGVMSTAWGGDSEFVEISAKFNQNIEELLETVLLVAEIQELKADPTVRAIGTVIEARLDKGKGAVATLLVQQGTLNVQDPIVVGNTFGRVRAMTNDLGRRVKVAGPSTPVSITGLNEAPMAGDHFAVYEDEKSARAAGEERAKRALMKQRQATQRVSLENLFDTLKAGELKSVNVIIKADVQGSVEALSASLQKIDVEGVKVTIVHSAVGAINESDVTLAEASNAFIVGFNVRPTPQARQQAEADDVEIRLHSIIYKVIEEMEEAMKGMLDSEFEEKVIGEAVIRETFKVSKVGTIGGFMVINGKVARDSKVRVIRDGVVIYDGELASLKHYKDDVKEVTNGREGGLMIDGYNDIKMDDVIEAYVMEEIKR

Annotated regions:
phrase: AIGTVIEARLDKGKGAVATLLVQQGTLNVQDPIVVGNTFGRVRAMTNDLGRRVKVAGPSTPVSITGLNEAPMAGDHFA
type: DOMAIN
name: EF-G-like_DII
description: Elongation factor G-like, domain II

phrase: RAIGTVIEARLDKGKGAVATLLVQQGTLNVQDPIVVGNTFGRVRAMTNDLGRRVKVAGPSTPVSITGLNEAPMAGDHFAVYEDEKSARAAGEERA
type: DOMAIN
name: IF2_II
description: Translation initiation factor IF-2, domain II

phrase: PPVVTIMGHVDHGKTTLLDTLRNSRVATGEAGGITQHIGAYQIVENGKKITFLDTPGHAAFTSMRARGASVTDITILVVAADDGVMPQTIEAINHSKAANVPIIVAINKIDKPGANPERVIGELAEHGVMSTAWGGDSEFVEISAKFNQNIEELLET
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: VVTIMGHVDHGKTTLLDTLRNSRVATGEAGGITQHIGAYQIVENGKKITFLDTPGHAAFTSMRARGASVTDITILVVAADDGVMPQTIEAINHSKAANVPIIVAINKIDKPGANPERVIGELAEHGVMSTAWGGDSEFVEISAKFNQNIEELLETVL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: MSKKRLYEIAKELGKESKEVVARAKELGLDVKSHSSSVEEAVAAKIAASF
type: DOMAIN
name: IF2_N
description: Translation initiation factor IF-2, N-terminal

phrase: DGMTVAEIAKRIKREPAEIVKKLFMMGVMATQNQSLDGETIELLMVDYGI
type: DOMAIN
name: IF2_N
description: Translation initiation factor IF-2, N-terminal

phrase: KQRQATQRVSLENLFDTLKAGELKSVNVIIKADVQGSVEALSASLQKIDVEGVKVTIVHSAVGAINESDVTLAEASNAFIVGFNVRPTPQARQQAEADDVEIRLHSIIYKVIEEM
type: DOMAIN
name: TIF_IF2_dom3
description: Translation initiation factor IF- 2, domain 3

phrase: ERPPVVTIMGHVDHGKTTLLDTLRNSRVATGEAGGITQHIGAYQIVENGKKITFLDTPGHAAFTSMRARGASVTDITILVVAADDGVMPQTIEAINHSKAANVPIIVAINKIDKPGANPERVIGELAEHGVMSTAWGGDSEFVEISAKFNQNIEELLETVLLVAEIQ
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain
Protein sequence:
MTEPISLYDLDFPALRSLVEGWGEPAYRARQLWEWLYVHLADNFDRMTNLPKALRRRLAEETTVGAPEVVDTLVSSDGQTRKDLLRLRDGETVEVVLMRYERRRTVCVSTQVGCSIGCAFCATGQAGFRRNLTAGEIVAQVLHFARVLRAEGERVTNVVLMGMGEPLLNYEASLAAIRRLIDPQGFRLGQRHITLSTVGVVPGIDRLAREGLQITLAVSLHAATDDLRDRLVPINRKYPLDDLFAACHRYVERTGRRISFEWALIAGVNDTTVQAEALAARLGGLLAHVNLIPLNPTPGYEGHPSPPEAIAAFTAVLDRRRIPYTVRLRRGIEIQAGCGQLRHRNLARRPRCPPPG

Annotated regions:
phrase: SLYDLDFPALRSLVEGWGEPAYRARQLWEWLYVHLADNFDRMTNLPKALRRRLAEET
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: STQVGCSIGCAFCATGQAGFRRNLTAGEIVAQVLHFARVLRAEGERVTNVVLMGMGEPLLNYEASLAAIRRLIDPQGFRLGQRHITLSTVGVVPGIDRLAREGLQITLAVSLHAATDDLRDRLVPINRKYPLDDLFAACHRYVERTGRRISFEWALIAGVNDTT
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: YERRRTVCVSTQVGCSIGCAFCATGQAGFRRNLTAGEIVAQVLHFARVLRAEGERVTNVVLMGMGEPLLNYEASLAAIRRLIDPQGFRLGQRHITLSTVGVVPGIDRLAREGLQITLAVSLHAATDDLRDRLVPINRKYPLDDLFAACHRYVERTGRRISFEWALIAGVNDTTVQAEALAARLGGLLAHVNLIPLNPTPGYEGHPSPPEAIAAFTAVLDRRRIPYTVRLRRGI
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MPRSNRNDNFIDKSFTVMADLIVKLLPINARSKEAYVYYRDGLSAQNDGDYAEALENYDEALKLEDNPTDRGETLKNMAIIYMSNGEEERAIETYRRALDENSNQPSCLKNMGLIFEKWGRIAEEDGRQDDADRWFDQAAEAWTQAVRLNPGGYLDIENWLKSTGRSNVDVYF

Annotated regions:
phrase: GETLKNMAIIYMSNGEEERAIETYRRALDENSN
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: AYVYYRDGLSAQNDGDYAEALENYDEALKLEDN
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: GETLKNMAIIYMSNGEEERAIETYRRALDENSN
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: PSCLKNMGLIFEKWGRIAEEDGRQDDADRWFDQAAEAWTQAVRLNPG
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: AYVYYRDGLSAQNDGDYAEALENYDEALKLEDN
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat
Protein sequence:
MNDVFLKALPVLQKLTTAGFEAYFVGGSVRDYLLNRPISDVDIATSAFPEEVKEIFQSTYDTGIAHGTVTVRENKECYEVTTFRTEGTYEDFRRPSEVTFIRSLEEDLLRRDFTMNAIAMDENFKLHDPFSGQLAIQNKEIKAVGKASERFHEDALRMMRAVRFLSQLDFQLDKETETALTNQIALLQHTSVERITVEWIKMIKGQAVKRAIDLLLKVEMETYLPGFKGEKSALMEFASWNWEKRTTETAIWLGLVIAVKPSNITAFLKAWKLPNKTIQLVNKAYEAALNMKETWLTEELYHAQEAVFLLVNEINNIRGQSDKEDELKKAYELLPIHSKKDLAITGADLLKWTGENAGPWVKETLDKVECQVLLGKINNEKNQIKRWLGYHEE

Annotated regions:
phrase: TTETAIWLGLVIAVKPSNITAFLKAWKLPNKTIQLVNKAYEAALNMKETWLTEELYHAQEAVFLLVNEINNIRGQSDKEDELKKAYELLPIHSKKDLAITGADLLKWTGENAGPWVKETLDKVECQVLLGKINNEKNQIKR
type: DOMAIN
name: CCA-adding_enz_C
description: CCA-adding enzyme, C-terminal

phrase: DFQLDKETETALTNQIALLQHTSVERITVEWIKMIKGQAVKRAIDLLLKVEMETYLPG
type: DOMAIN
name: PolyA_RNA-bd
description: tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain

phrase: KALPVLQKLTTAGFEAYFVGGSVRDYLLNRPISDVDIATSAFPEEVKEIFQSTYDTGIAHGTVTVRENKECYEVTTFRTEGTYEDFRRPSEVTFIRSLEEDLLRRDFTMNAIAMDENFKLHDPFSGQLAIQ
type: DOMAIN
name: PolA_pol_head_dom
description: Poly A polymerase, head domain

phrase: AYFVGGSVRDYLLNRPISDVDIATSAFPEEVKEIFQSTYDTGIAHGTVTVRENKECYEVTTFRTEGTYEDFRRPSEVTFIRSLEEDLLRRDFTMNAIAMDENFKLHDPFSGQLAIQNKE
type: DOMAIN
name: PolA_pol_head_dom
description: Poly A polymerase, head domain
Protein sequence:
MKFLSLFFLALAGVAFAHDGGMGGMDMIKSYSILGAMIGLGIAAFGGAIGMGNAAAATITGTARNPGVGGKLLTTMFVAMAMIEAQVIYTLVFAIIAIYSNPFLS

Annotated regions:
phrase: ARNPGVGGKLLTTMFVAMAMI
type: BINDING_SITE
name: ATP_synth_F0_csu_DDCD_BS
description: ATP synthase, F0 complex, subunit C, DCCD-binding site

phrase: LGAMIGLGIAAFGGAIGMGNAAAATITGTARNPGVGGKLLTTMFVAMAMIEAQVIYTLVFAI
type: DOMAIN
name: ATPase_proteolipid_c-like_dom
description: V-ATPase proteolipid subunit C-like domain
Protein sequence:
MAAVSAKLVKELRDKTGAGMMDCKKALAETSGDTTKAVEWLRQKGIASAEKKSSRAAAEGAIGSYIHTGARVGVLLELNCETDFVARGDLFQGLLRDVSMQVAACPNVEYVSTDDIPQDIIDREKSIEMGRDDLDGKPDQMKVKIVEGRIGKRLKEMSLLDQPFIRDSSMSVADLVKEVAGKIGENVKVRRFTRYTLGEGIEIKQVDFATEVASMTNS

Annotated regions:
phrase: ELNCETDFVA
type: CONSERVED_SITE
name: Transl_elong_Ts_CS
description: Translation elongation factor Ts, conserved site

phrase: LRDKTGAGMMDCKKA
type: CONSERVED_SITE
name: Transl_elong_Ts_CS
description: Translation elongation factor Ts, conserved site

phrase: AAEGAIGSYIHTGARVGVLLELNCETDFVARGDLFQGLLRDVSMQVAACPNVEYVSTDDIPQDIIDREKSIEMGRDDLDGKPDQMKVKIVEGRIGKRLKEMSLLDQPFIRDSSMSVADLVKEVAGKIGENVKVRRFTRYTLG
type: DOMAIN
name: Transl_elong_EFTs/EF1B_dimer
description: Translation elongation factor EFTs/EF1B, dimerisation
Protein sequence:
MRILGIDPGLRTTGFGVLEKHGNKLAYVASGTIRSNGETSLPERLKTLYDGISEVARTYAPDCAAIEKVFVNVNPQSTLLLGQARGAAICGLVGQGLPVFEYTALQLKVAVVGYGRANKEQVQEMVMRLLSLSGRPSSDAADALGVAICHANGGDTLGTLAGLAPELARKGMRVRRGRLVG

Annotated regions:
phrase: GYGRANKEQVQEMVMRLLSLSGRPSSDAADALGV
type: BINDING_SITE
name: X-over_junc_endoDNase_Mg_BS
description: Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site
Protein sequence:
MSVSQKHPFHLVDPSPWPLLGSLGALASTIGGVMYMHSFTGGGTLLCLGLGMILYTMFVWWRDVIRESTYEGHHTFVVQLGLRYGIILFIVSEVMFFLAFFWAFFHSSLAPTVEIGAIWPPKGISVLDPWGIPFLNTLILLSSGAAVTWAHHAILAGLKQQAVYALIATVFLALVFTGFQGIEYIEAPFTISDGIYGSTFFLATGFHGFHVIIGTIFLIICGIRQYLGHFTPKHHFGFEAAAFYWHFVDVVWLFLFVSIYWWGGN

Annotated regions:
phrase: QKHPFHLVDPSPWPLLGSLGALASTIGGVMYMHSFTGGGTLLCLGLGMILYTMFVWWRDVIRESTYEGHHTFVVQLGLRYGIILFIVSEVMFFLAFFWAFFHSSLAPTVEIGAIWPPKGISVLDPWGIPFLNTLILLSSGAAVTWAHHAILAGLKQQAVYALIATVFLALVFTGFQGIEYIEAPFTISDGIYGSTFFLATGFHGFHVIIGTIFLIICGIRQYLGHFTPKHHFGFEAAAFYWHFVDVVWLFLFVSIYWWG
type: DOMAIN
name: Cyt_c_oxidase-like_su3
description: Cytochrome c oxidase subunit III-like

phrase: LLGSLGALASTIGGVMYMHSFTGGGTLLCLGLGMILYTMFVWWRDVIRESTYEGHHTFVVQLGLRYGIILFIVSEVMFFLAFFWAFFHSSLAPTVEIGAIWPPKGISVLDPWGIPFLNTLILLSSGAAVTWAHHAILAGLKQQAVYALIATVFLALVFTGFQGIEYIEAPFTISDGIYGSTFFLATGFHGFHVIIGTIFLIICGIRQYLGHFTPKHHFGFEAAAFYWHFVDVVWLFLFVSIYW
type: DOMAIN
name: Cyt_c_oxase_su3_dom
description: Cytochrome c oxidase subunit III domain

phrase: HPFHLVDPSPWPLLGSLGALASTIGGVMYMHSFTGGGTLLCLGLGMILYTMFVWWRDVIRESTYEGHHTFVVQLGLRYGIILFIVSEVMFFLAFFWAFFHSSLAPTVEIGAIWPPKGISVLDPWGIPFLNTLILLSSGAAVTWAHHAILAGLKQQAVYALIATVFLALVFTGFQGIEYIEAPFTISDGIYGSTFFLATGFHGFHVIIGTIFLIICGIRQYLGHFTPKHHFGFEAAAFYWHFVDVVWLFLFVSIYWW
type: DOMAIN
name: Cyt_c_oxidase-like_su3
description: Cytochrome c oxidase subunit III-like
Protein sequence:
MNLAELTEYTRHLGTRAKTASALMAKAPAASKSQALKALARRLRDNTPALQIDNARDLERARAAGLAAPMVERLQLSPQTLETCAQGCEQLAAMPDIIGAIQGLQQQPSGIRVGRMRVPIGVFCMVYESRPNVTIEAASLSIKSGNACILRGGSEAMASNQALTALVQQALAEAGLPQDAVQLVQTTDRAAVGQLIAMPECVDLIIPRGGKGLIERISREARVPVIKHLDGNCHIYVDAPCDIAMAVQVADNAKTHKYSPCNASESLLVARPVAAEFLPKIGAIYATKGVEMRACPEALAILGAVTGAKLLPATEQDWSEEYLAPIISVKVLDGVDAAIAHINRYSSHHTDAILTMHHAHAQRFLREVDSASVLVNASTRFADGFEYGLGAEIGISTDKLHARGPVGIEGLTSLKYVVLGEGEIRH

Annotated regions:
phrase: LGTRAKTASALMAKAPAASKSQALKALARRLRDNTPALQIDNARDLERARAAGLAAPMVERLQLSPQTLETCAQGCEQLAAMPDIIGAIQGLQQQPSGIRVGRMRVPIGVFCMVYESRPNVTIEAASLSIKSGNACILRGGSEAMASNQALTALVQQALAEAGLPQDAVQLVQTTDRAAVGQLIAMPECVDLIIPRGGKGLIERISREARVPVIKHLDGNCHIYVDAPCDIAMAVQVADNAKTHKYSPCNASESLLVARPVAAEFLPKIGAIYATKGVEMRACPEALAILGAVTGAKLLPATEQDWSEEYLAPIISVKVLDGVDAAIAHINRYSSHHTDAILTMHHAHAQRFLREVDSASVLVNASTRFADGFEYGLGAEIGISTDKLHARGPVGIEGLTSLKYVVLG
type: DOMAIN
name: GPR_dom
description: GPR domain

phrase: TRAKTASALMAKAPAASKSQALKALARRLRDNTPALQIDNARDLERARAAGLAAPMVERLQLSPQTLETCAQGCEQLAAMPDIIGAIQGLQQQPSGIRVGRMRVPIGVFCMVYESRPNVTIEAASLSIKSGNACILRGGSEAMASNQALTALVQQALAEAGLPQDAVQLVQTTDRAAVGQLIAMPECVDLIIPRGGKGLIERISREARVPVIKHLDGNCHIYVDAPCDIAMAVQVADNAKTHKYSPCNASESLLVARPVAAEFLPKIGA
type: DOMAIN
name: Aldehyde_DH_dom
description: Aldehyde dehydrogenase domain

phrase: AKTASALMAKAPAASKSQALKALARRLRDNTPALQIDNARDLERARAAGLAAPMVERLQLSPQTLETCAQGCEQLAAMPDIIGAIQGLQQQPSGIRVGRMRVPIGVFCMVYESRPNVTIEAASLSIKSGNACILRGGSEAMASNQALTALVQQALAEAGLPQDAVQLVQTTDRAAVGQLIAMPECVDLIIPRGGKGLIERISREARVPVIKHLDGNCHIYVDAPCDIAMAVQVADNAKTHKYSPCNASESLLVARPVAAEFLPKIGAIYATKGVEMRACPEALAILGAVTGAKLLPATEQDWSEEYLAPIISVKVLDGVDAAIAHINRYSSHHTDAILTMHHAHAQRFLREVDSASVLVNASTRFADGFEYGLGAEIGISTDKLHARGPVGIEGLTSL
type: DOMAIN
name: GPR_dom
description: GPR domain

phrase: YTRHLGTRAKTASALMAKAPAASKSQALKALARRLRDNTPALQIDNARDLERARAAGLAAPMVERLQLSPQTLETCAQGCEQLAAMPDIIGAIQGLQQQPSGIRVGRMRVPIGVFCMVYESRPNVTIEAASLSIKSGNACILRGGSEAMASNQALTALVQQALAEAGLPQDAVQLVQTTDRAAVGQLIAMPECVDLIIPRGGKGLIERISREARVPVIKHLDGNCHIYVDAPCDIAMAVQVADNAKTHKYSPCNASESLLVARPVAAEFLPKIGAIYATKGVEMRACPEALAILGAVTGAKLLPATEQDWSEEYLAPIISVKVLDGVDAAIAHINRYSSHHTDAILTMHHAHAQRFLREVDSASVLVNASTRFADGFEYGLGAEIGISTDKLHARGPVGIEGLTSLKYVVLGEGEI
type: DOMAIN
name: GPR_dom
description: GPR domain
Protein sequence:
MEESPYLHSPYQVAIIATDLHHEDTIIQAAQSLDCLHKTINSIFERIDARLARNGSKVEDINNRVKRAQAKIDALVGSKRAIQIFAPARFPASDVLAPLPATFPQVAANPLMEQPVDQQPQGPYSSHSPTEHKPDDADIFFHVRGDREQESPLVAERKITNRTAGLGSLPAGGVRSVPSLMRFNTNEFAYGEDLNAWKRSLPPQSARRVASQSTQLTVDKQLAPAPHSLAHGTTKLATPAGDLRYNPAALAAPAIDVPLDLPDLPGIANDLQYEPVEEQTPIAPSQQFGDLPELPDLGLEEQDITVQAIAAQTHIPGPLRRKSVGQCPSPVTAAPPPPPPPPPPPPPPPAQTNAIPSPPPFPTKGAVKPLSPSLATPLNMPQPPPATEDPRSELMAAIRNAGGVHGGRLRSPAAAPLDVVDNSRSKAGGAATGDLMADLHNKLMLRRKGISGNQNPAEATAGNPLMQQLSRIIPPPVQPRKGSQSAAKNTPRTNKDGPSRDINDLFDDIVLTEEKEARLGYEEGLKDGQEQGNEEGYKLGYAQGVSLGEELGKILGQVVAQQQLKHTDKVRRSLEQLRSLIEEFPRTNDPQADIVGAVQDIRSSHRRLRAQLGSKKTPGAAAPETNSVEHKDYSF

Annotated regions:
phrase: GYEEGLKDGQEQGNEEGYKLGYAQGVSLGEELGKILG
type: DOMAIN
name: Essential_protein_Yae1_N
description: Essential protein Yae1, N-terminal

phrase: SPYQVAIIATDLHHEDTIIQAAQSLDCLHKTINSIFERIDARLARNGSKVEDINNRVKRAQAKIDALVGSKRAIQIFAPARFPASDVLAPLPATFPQVAANPLMEQPVDQQPQGPYSSHSPTEHKPDDADIFFHVRGDREQESPLVAERKITNRTAGLGSLPAGGVRSVPSLMRFNTNEFAYGEDLNAWKRSLPPQSARRVASQSTQLTVDKQLAPAPHSLAHGTTKLATPAGDLRYNPAALAAPAIDVPLDLPDLPGIANDLQYEPVEEQTPIAPSQQFGDLPELPDLGLEEQDIT
type: DOMAIN
name: WASH1_WAHD
description: WASH1, WAHD domain
Protein sequence:
MKIGIIAYQGSFEEHFLQLKRAFDKLSLNGEIISIKIPKDLKGVDGVIIPGGESTTIGLVAKRLGLLDELKEKITSGLPVLGTCAGAIMLAKEVSDAKVGKTSQPLIGTMNISVIRNYYGRQKESFEAIVDLSKIGKDKAHVVFIRAPAIAKVWGKAQSLAELNGVTVFAEENNMLATTFHPELSDTTSIHEYFLHLVKG

Annotated regions:
phrase: GVIIPGGEST
type: CONSERVED_SITE
name: PdxT/SNO_CS
description: PdxT/SNO family, conserved site