nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
QGYSTVAFDGPPSYGHAPSHHAAQFSNHSFKHEDPIAQQTSLGDQQYSVPPPVYGCHTPTDSCTGSQALLLRTPYNSDNLYQMTSQLECMTWNQMNLGSTLKGHATGYENENHTAPMLYSCGAQYRIHTHGVFRGIQDVRRVPGVAPTIVRSASETNEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGKTSEKPFSCRWPSCQKKFARSDELVRHHNMHQRNMTKLQLAL

Annotated regions:
phrase: FQCKTCQRKFSRSDHLKTHTRTHTGKT
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: FMCAYPGCNKRYFKLSHLQMHSRKHTGEK
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: CRWPSCQKKFARSDELVRHHNM
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: YQCDFKDCERRFSRSDQLKRHQRRHTGVK
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: FQCKTCQRKFSRSDHLKTHTRT
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: YQCDFKDCERRFSRSDQLKRHQRR
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: FSCRWPSCQKKFARSDELVRHHNM
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: FMCAYPGCNKRYFKLSHLQMHSRK
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: FSCRWPSCQKKFARSDELVRHHNMHQRNM
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: CAYPGCNKRYFKLSHLQMHSRK
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: QGYSTVAFDGPPSYGHAPSHHAAQFSNHSFKHEDPIAQQTSLGDQQYSVPPPVYGCHTPTDSCTGSQALLLRTPYNSDNLYQMTSQLECMTWNQMNLGSTLKGHATGYENENHTAPMLYSCGAQYRIHTHGVFRGIQDVRRVPGVAPTIVRSASETNEK
type: DOMAIN
name: Wilms_tumour_N
description: Wilm's tumour protein, N-terminal

phrase: CDFKDCERRFSRSDQLKRHQRR
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: YQCDFKDCERRFSRSDQLKRHQRR
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: FQCKTCQRKFSRSDHLKTHTRT
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: FSCRWPSCQKKFARSDELVRHHNM
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: CKTCQRKFSRSDHLKTHTRT
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type
Protein sequence:
MSDSASISSGIADRYATAIFELAKEENNIGALEAGADLLDAALKESAEFRDLISSPVYSRDEQAGAIGAIAKKLELAPMLSNALALMASKRRLFVLPQLVASLRALIAEEKGEMTADVISAQPLSKANLDELTKVLSASADKTVKVNATVDNSLIGGLVVKMGSKMIDTSIRAKLNALQNTMKEVG

Annotated regions:
phrase: VKVNATVDNSLIGGLVVKM
type: CONSERVED_SITE
name: ATPase_OSCP/d_CS
description: ATPase, OSCP/delta subunit, conserved site
Protein sequence:
MNEEQQVLQEQHQEQTQEQTQEQKETLPPQIERRIKKLISLGKKKGYITYEDIDKAFPPDFEGFDTNLIERIHEELEKHGINIVENEPEEEEISASSDEQELEELLEKESPEIHDSSNVRDSIKMYLKEIGKIPLLTPAQERELARRAQMGDKKAKEKLITSNLRLVVSIAKRYMGRGLSFQDLIQEGNIGLLKAVEKFDWRKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLNRLRREYYQKHGEEPSIEELAKMMGKPPEKIKEILEAAKETISLESPIGEDEDSSIEDFVADDSIASPKKEAMRMLMREELEKVLKTLSPREAMVLRMRYGLLDGKPKTLEEVGQYFNVTRERIRQIEVKALRKLRHPSRSKYLKSLLSLMDENEG

Annotated regions:
phrase: LITSNLRLVVSIAKRYMGRGLSFQDLIQEGNIGLLKAVEKFDWRKGYKFSTYATWWIRQAITRAIADQAR
type: DOMAIN
name: RNA_pol_sigma70_r2
description: RNA polymerase sigma-70 region 2

phrase: AKEKLITSNLRLVVSIAKRYMGRGLSFQDLIQEGNIGLLKAVEKFDWRKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLNRLRREYYQKHGEEPSIEELAKMMGKPPEKIKEILEAAKETISLESPIGEDEDSSIEDFVADDSIASPKKEAMRMLMREELEKVLKTLSPREAMVLRMRYGLLDGKPKTLEEVGQYFNVTRERIRQIEVKALRKLR
type: DOMAIN
name: RNA_pol_sigma-70_dom
description: RNA polymerase sigma-70-like domain

phrase: DSIKMYLKEIGKIPLLTPAQERELARRAQMGD
type: DOMAIN
name: RNA_pol_sigma70_r1_2
description: RNA polymerase sigma-70 region 1.2

phrase: VLKTLSPREAMVLRMRYGLLDGKPKTLEEVGQYFNVTRERIRQIEVKALRKLR
type: DOMAIN
name: RNA_pol_sigma70_r4
description: RNA polymerase sigma-70 region 4

phrase: ETINKLNRLRREYYQKHGEEPSIEELAKMMGKPPEKIKEILEAAKETISLESPIGEDEDSSIEDFVADDSIASPK
type: DOMAIN
name: RNA_pol_sigma70_r3
description: RNA polymerase sigma-70 region 3

phrase: DLIQEGNIGLLKA
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: TLEEVGQYFNVTRERIRQIEVKALRK
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: DLIQEGNIGLLKA
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: FSTYATWW
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: LSPREAMVLRMR
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: TLEEVGQYFNVTRER
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: IRQIEVKALRK
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: ERRIKKLISLGKKKGYITYEDIDKAFPPDFEGFDTNLIERIHEELEKHGINIVENEPEEEEISASSDEQELEE
type: DOMAIN
name: RNA_pol_sigma_70_r1_1
description: RNA polymerase sigma factor 70, region 1.1

phrase: AKEKLITSNLRLVVSIAKRYMGRGLSFQDLIQEGNIGLLKAVEKFDWRKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLNRLRREYYQKHGEEPSIEELAKMMGKPPEKIKEILEAAKETISLESPIGEDEDSSIEDFVADDSIASPKKEAMRMLMREELEKVLKTLSPREAMVLRMRYGLLDGKPKTLEEVGQYFNVTRERIRQIEVKALRKLRHPSRSKYLKSL
type: DOMAIN
name: RNA_pol_sigma_RpoD_C
description: RNA polymerase sigma factor RpoD, C-terminal
Protein sequence:
MTPKLILASSSPFRRMLMENAGLFFEAHPAEIDERAVEAPLEKAGAKPDTVACVLAKAKAEDVSARFPESLVIGSDQTMSLGDRVFHKPKDIADAANHLRALSGTTHRLNSAIVLVRDGAVLWEHVGHAELTMRPLTEDFIARHLSRVGERALSSVGAYQLEGEGVQLFEKIEGDYFTILGLPMLPLLGKLRELGTIDG

Annotated regions:
Protein sequence:
MATLQLLRAPLLCVLLWVFCAPGARAHDHGADVHHGSVGLDKSTVHDQEHIMEHLEGVIDQPEAEMSPQELQLHYFKMHDYDGNSLLDGLELSIAITHVHKEEGSEQAPVMSEDELVSIIDGVLRDDDKNNDGYIDYAEFAKSLQ

Annotated regions:
phrase: DKNNDGYIDYAE
type: BINDING_SITE
name: EF_Hand_1_Ca_BS
description: EF-Hand 1, calcium-binding site

phrase: FKMHDYDGNSLLDGLELSIAITHVHKEEGSEQAPVMSEDELVSIIDGVLRDDDKNNDGYIDYAEFA
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: ELVSIIDGVLRDDDKNNDGYIDYAEFAKSL
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain
Protein sequence:
MSKMYNVAILGATGAVGQQMIDTLDRLEFPISELKLLSSSRSAGKKIMFKGQELTVEEAKPESFEGVDLALFSAGGSISKELAPEAVERGATVVDNTSAFRMDKDIPLVVPEVNADALKEHNGIIANPNCSTIQMVAAMEPVRKAFGLKRVIVSTYQAVSGAGNAAVDEMYEQSQQIMNDEPINPQILPVGGDKKHYQIAFNAVPQIDKFQDNGYTFEEMKMINETKKIMSDDSIQVAATCVRLPVETGHSESVYVEVEKDGLDVAGFKKLMEEAPGVTLQDDPSNQIYPLATDAKGKDDVFVGRIRQDLDHPKGFHFWVVADNLLKGAALNSVQIAQSLVEQNLLKK

Annotated regions:
phrase: NVAILGATGAVGQQMIDTLDRLEFPISELKLLSSSRSAGKKIMFKGQELTVEEAKPESFEGVDLALFSAGGSISKELAPEAVERGATVVDNTSAFRMDKDIPLVVPEVNADALKE
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: NVAILGATGAVGQQMIDTLDRLEFPISELKLLSSSRSAGKKIMFKGQELTVEEAKPESFEGVDLALFSAGGSISKELAPEAVERGATVVDNTSAFRMDKDIPLVVPEVNADALK
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: VAATCVRLPVETGH
type: CONSERVED_SITE
name: Asp-semialdehyde_DH_CS
description: Aspartate-semialdehyde dehydrogenase, conserved site

phrase: EPVRKAFGLKRVIVSTYQAVSGAGNAAVDEMYEQSQQIMNDEPINPQILPVGGDKKHYQIAFNAVPQIDKFQDNGYTFEEMKMINETKKIMSDDSIQVAATCVRLPVETGHSESVYVEVEKDGLDVAGFKKLMEEAPGVTLQDDPSNQIYPLATDAKGKDDVFVGRIRQDLDHPKGFHFWVVADNLL
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain
Protein sequence:
MDDKQYKGTTTVGIICNNGLVLATERRATMGNLIASRDAQKIYQLTDNIAMTIAGSVGDGQRLARMLQAESKLFELRRHGPMSINALSMLLSNLLWEYRIFYIQVLVGGVDKSGPKLFSLDPAGGRITEVKFSSTGSGSPLAYGVLEDRYKQDMSVEQGVELAAKALESAMKRDSASGNGMQFCVITPGKVEIFEREVGKQVCNS

Annotated regions:
phrase: VGIICNNGLVLATERRATMGNLIASRDAQKIYQLTDNIAMTIAGSVG
type: CONSERVED_SITE
name: Proteasome_bsu_CS
description: Proteasome beta-type subunit, conserved site
Protein sequence:
MAIQTDSFAAAPAPSSGSTRRLISAAPTSPNEEAMERALRPKLLQEYVGQAKAREQLEIFIGAARKRSEALDHVLLFGPPGLGKTTLSHIIAAELGVNLRQTSGPVLEKPKDLAAILTNLEANDVLFIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSIKLDLQPFTLVGATTRAGMLTNPLRDRFGIVARLEFYTPEELVRIVTRSAGLLNVPIDAEGALELACRSRGTPRIANRLLRRVRDYAEVKSDGRIVKRIAELALTMLDVDPRGFDVMDRKLLEAVIHRFDGGPVGLDNVAAAIGEDAGTIEDVIEPYLIQQGFLQRTPRGRIATLAAYRHLGVTPPRGGAGPVGSDLFEG

Annotated regions:
phrase: YTPEELVRIVTRSAGLLNVPIDAEGALELACRSRGTPRIANRLLRRVRDYAEVKSDGRIVKRIAELALTMLDV
type: DOMAIN
name: AAA_lid_4
description: RuvB, AAA lid domain

phrase: ALDHVLLFGPPGLGKTTLSHIIAAELGVNLRQTSGPVLEKPKDLAAILTNLEANDVLFIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSIKLDLQPFTLVGATTRAGMLTNPLRDRFGIVAR
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LRPKLLQEYVGQAKAREQLEIFIGAARKRSEALDHVLLFGPPGLGKTTLSHIIAAELGVNLRQTSGPVLEKPKDLAAILTNLEANDVLFIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSIKLDLQPFTLVGATTRAGMLTNPLRDRFGIVAR
type: DOMAIN
name: RuvB-like_N
description: RuvB-like P-loop domain

phrase: GFDVMDRKLLEAVIHRFDGGPVGLDNVAAAIGEDAGTIEDVIEPYLIQQGFLQRTPRGRIATLAAYRH
type: DOMAIN
name: RuvB_C
description: RuvB C-terminal winged helix domain
Protein sequence:
MDSSTTIPITPTRTPCFFNISSSFNEHSPLNFYDEPIYNFSSGHEENQSHKSSKLTFFKPSNTKRSPHTPMQNNAKAIRLSTTVRHGIFKNSDLDGCSKPFAFSSGLKLSKKIVDASTPIDLKRKRAVTSLSTGLLSKREKWSLWEGNLTNPRSEQPHTPCKKGTKIKLKPPQSPLSPTTSLLARKCKHIDLDTFSRLDHPNSDSSDETFEMEELPSLSYGSEDLLEFCETPCKSQPIFLSSSHVNNWDEKDVPSSLSWTPTSPIFLNINSADDYEEEEDWTSDLRIRFQQVKPIHESDFSFVYHVSSINPPTETVYVVKMLKKNAAKFTGKERHLQEVSILQRLQACPFVVNLVNVWSYNDNIFLQLDYCENGDLSLFLSELGLLQVMDPFRVWKMLFQLTQALNFIHLLEFVHLDVKPSNVLITRDGNLKLGDFGLATSLPVSSMVDLEGDRVYIAPEILASHNYGKPADVYSLGLSMIEAATNVVLPENGVEWQRLRSGDYSNLPNLKDLLLSKEKVQINKVRCAESLQCLLQRMTHPYVDCRPTTQDLLAMPEMIFISEHSQKAAIIYEDHNSWLET

Annotated regions:
phrase: FVHLDVKPSNVL
type: ACTIVE_SITE
name: Ser/Thr_kinase_AS
description: Serine/threonine-protein kinase, active site

phrase: FSFVYHVSSINPPTETVYVVKMLKKNAAKFTGKERHLQEVSILQRLQACPFVVNLVNVWSYNDNIFLQLDYCENGDLSLFLSELGLLQVMDPFRVWKMLFQLTQALNFIHLLEFVHLDVKPSNVLITRDGNLKLGDFGLATSLPVSSMVDLEGDRVYIAPEILASHNYGKPADVYSLGLSMIEAATNVVLPENGVEWQRLRSGDYSNLPNLKDLLLSKEKVQINKVRCAESLQCLLQRMTHPYVDCRPTTQDLLAM
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: FQQVKPIHESDFSFVYHVSSINPPTETVYVVKMLKKNAAKFTGKERHLQEVSILQRLQACPFVVNLVNVWSYNDNIFLQLDYCENGDLSLFLSELGLLQVMDPFRVWKMLFQLTQALNFIHLLEFVHLDVKPSNVLITRDGNLKLGDFGLATSLPVSSMVDLEGDRVYIAPEILASHNYGKPADVYSLGLSMIEAATNVVLPENGVEWQRLRSGDYSNLPNLKDLLLSKEKVQINKVRCAESLQCLLQRMTHPYVDCRPTTQDLLAMPEMIF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: FQQVKPIHESDFSFVYHVSSINPPTETVYVVKMLKKNAAKFTGKERHLQEVSILQRLQACPFVVNLVNVWSYNDNIFLQLDYCENGDLSLFLSELGLLQVMDPFRVWKMLFQLTQALNFIHLLEFVHLDVKPSNVLITRDGNLKLGDFGLATSLPVSSMVDLEGDRVYIAPEILASHNYGKPADVYSLGLSMIEAATNVVLPENGVEWQRLRSGDYSNLPNLKDLLLSKEKVQINKVRCAESLQCLLQRMTHPYVDCRPTTQDLLAMPE
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain
Protein sequence:
MVTIVLNKYKLLDKIHIGQQKLEDLLFNLKSEVKPIDENNIEIEINADRLDLLSSDGIARAIKGLLEKELGEAKYNVTDTEYTLIVDNVRTRPYALAAVVYNAKIDLEELIQFQEKLHGTIGRKRKKVAIGIHDLRKVDSKTIEYKEVPLSYKFVPLYENKELTISEILEKTEQGKLYGNISIANGVSPAIVQDDGEVLSIPPIINSNKTRLDENTKDFFIDVTGTSFEAVAQTLDIIVSNLAEAGGTIGRVKVLKSANFSQLSSPLFLHKIQNVREEYVKKILGIKTSKEEICKHVMRMRMNCDIENGVIRVTVPQYRVDILNEIDVVEDIAMSIGYNNLEPSKYISTNYGSYDYMTLLERKIRELGIGAGYVEISNFVLIKDEKLFSNKYVKILNPVTDEYNAVRNSLIPGLLDFLSKNQHAKFPIRVFETGDVVVYDSSTDTGFRNDKRAAYAIMDNKVSYEDIQAPIHYILKSLGLEVNYKEENNNIFIEGRSASIFYENEKMGVIGEVNPDVLIRFGIEYPAVIAELYISEIAKRLTNQR

Annotated regions:
phrase: YMTLLERKIRELGIGAGYVEISNFVLIKDEKLFSNKYVKILNPVTDEYNAVRNSLIPGLLDFLSKNQHAKFPIRVFETGDVVVYDSSTDTGFRNDKRAAYAIMDNKVSYEDIQAPIHYILKSLGLEVNYKEENNNIFIEGRSASIFYENEKMGVIGEVNPDVLIRFGIEYPAVIAELYISE
type: DOMAIN
name: PheRS_beta_core
description: Phenylalanyl tRNA synthetase beta chain, core domain

phrase: HKIQNVREEYVKKILGIKTSKEEICKHVMRMRMNCDIENGVIRVTVPQYRVDILNEIDVVEDIAMSIG
type: DOMAIN
name: tRNA_synthase_B5-dom
description: tRNA synthetase, B5-domain

phrase: TRPYALAAVVYNAKIDLEELIQFQEKLHGTIGRKRKKVAIGIHDLRKVDSKTIEYKEVPLSYKFVPLYENKELTISEILEKTEQGKLYGNISIANGVSPAIVQDDGEVLSIPPIINSNKTRLDENTKDFFIDVTGTSFEAVAQTLDIIVSNLAEAG
type: DOMAIN
name: B3/B4_tRNA-bd
description: B3/B4 tRNA-binding domain

phrase: VREEYVKKILGIKTSKEEICKHVMRMRMNCDIENGVIRVTVPQYRVDILNEIDVVEDIAMSIG
type: DOMAIN
name: tRNA_synthase_B5-dom
description: tRNA synthetase, B5-domain

phrase: NYGSYDYMTLLERKIRELGIGAGYVEISNFVLIKDEKLFSNKYVKILNPVTDEYNAVRNSLIPGLLDFLSKNQHAKFPIRVFETGDVVVYDSSTDTGFRNDKRAAYAIMDNKVSYEDIQAPIHYILKSLGLEVNYKEENNNIFIEGRSASIFYENEKMGVIGEVNPDVLIRFGIEYPAVIAEL
type: DOMAIN
name: PheRS_beta_core
description: Phenylalanyl tRNA synthetase beta chain, core domain

phrase: FLHKIQNVREEYVKKILGIKTSKEEICKHVMRMRMNCDIENGVIRVTVPQYRVDILNEIDVVEDIAMSIGYNNLE
type: DOMAIN
name: tRNA_synthase_B5-dom
description: tRNA synthetase, B5-domain
Protein sequence:
MSDSSEATVKRPLDAHVGPSENAAKKLKIEQRTQADGIHEADVGITLFLSPELPGFRGQIKQRYTDFLVNEIDQEGKVIHLTDKGFKMPKKPQRSKEEVNAEKESEAARRQEFNVDPELRNQLVEIFGEEDVLKIESVYRTANKMETAKNFEDKSVRTKIHQLLREAFKNELESVTTDTNTFKIARSNRNSRTNKQEKINQTRDANGVENWGYGPSKDFIHFTLHKENKDTMEAVNVITKLLRVPSRVIRYAGTKDRRAVTCQRVSISKIGLDRLNALNRTLKGMIIGNYNFSDASLNLGDLKGNEFVVVIRDVTTGNSEVSLEEIVSNGCKSLSENGFINYFGMQRFGTFSISTHTIGRELLLSNWKKAAELILSDQDNVLPKSKEARKIWAETKDAALALKQMPRQCLAENALLYSLSNQRKEEDGTYSENAYYTAIMKIPRNLRTMYVHAYQSYVWNSIASKRIELHGLKLVVGDLVIDTSEKSPLISGIDDEDFDEDVREAQFIRAKAVTQEDIDSVKYTMEDVVLPSPGFDVLYPSNEELKQLYVDILKADNMDPFNMRRKVRDFSLAGSYRTVIQKPKSLEYRIIHYDDPSQQLVNTDLDILNNTRAKESGQKYMKAKLDRYMPDKGGEKTAVVLKFQLGTSAYATMALRELMKLETSRRGDMCDVKENI

Annotated regions:
phrase: GTKDRRAVTCQRV
type: CONSERVED_SITE
name: PsdUridine_synth_TruD_CS
description: Pseudouridine synthase TruD, conserved site

phrase: GFINYFGMQRFGTFSISTHTIGRELLLSNWKKAAELILSDQDNVLPKSKEARKIWAETKDAALALKQMPRQCLAENALLYSLSNQRKEEDGTYSENAYYTAIMKIPRNLRTMYVHAYQSYVWNSIASKRIELHGLKLVVGDLVIDTSEKSPLISGIDDEDFDEDVREAQFIRAKAVTQEDIDSVKYTMEDVVLPSPGFDVLYPSNEELKQLYVDILKADNMDPFNMRRKVRDFSLAGSYRTVIQ
type: DOMAIN
name: PsdUridine_synth_TruD_insert
description: Pseudouridine synthase, TruD, insertion domain
Protein sequence:
MARAMDNAILETILQRVRPLIGQGKVADYIPALASVEGSKLGIAICTVDGQHYQAGDAHERFSIQSISKVLSLVVAMRHYPEEEIWQRVGKDPSGSPFNSLVQLEMEQGIPRNPFINAGALVVCDMLQGRLSAPRQRMLEVVRALCGVSDITYDATVARSEFEHSARNAAIAWLMKSFGNFHHDVPTVLQNYFHYCALKMSCMELARTFVFLANQGEAFHLDEPVVTPMQARQINALMATSGMYQNAGEFAWRVGLPAKSGVGGGIVAIVPHEMAIAVWSPELDPAGNSLAGIAALEQLTQTLGRSVY

Annotated regions:
Protein sequence:
ALVLLAFQVQADPIQNTDEETKTEEQPGEDDQAVSVSFGDPEGSSLQEESLRDLVCYCRTRGCKRRERMNGTCRKGHLMHTLCCR

Annotated regions:
phrase: CYCRTRGCKRRERMNGTCRKGHLMHTLC
type: DOMAIN
name: Alpha-defensin_C
description: Alpha-defensin, C-terminal

phrase: ALVLLAFQVQADPIQNTDEETKTEEQPGEDDQAVSVSFGDPE
type: DOMAIN
name: Alpha-defensin_N
description: Alpha-defensin, N-terminal

phrase: ALVLLAFQVQADPIQNTDEETKTEEQPGEDDQAVSVSFGDP
type: DOMAIN
name: Alpha-defensin_N
description: Alpha-defensin, N-terminal

phrase: CYCRTRGCKRRERMNGTCRKGHLMHTLC
type: DOMAIN
name: Beta/alpha-defensin_C
description: Beta/alpha-defensin, C-terminal

phrase: CYCRTRGCKRRERMNGTCRKGHLMHTLC
type: DOMAIN
name: Alpha-defensin_C
description: Alpha-defensin, C-terminal
Protein sequence:
MSLIRLNIDSFRNIQLAQLSPSSGINLIYGQNGSGKTSILEAIYFLGMGRSFRSHLSQRVINNEQDKLTLFATLNLPRGDSKIGLRRFRSGETEVKIDGEKVKRLSTLAETLPIQVITPESFSLLFEGPKSRRQFIDWGAFHSDPQFYAAWVNVRRVLKQRNQLLRNNSSYDQIQYWDREFVRYTEQVTEIRNRYVDSLNELLKGIIGEFLPQVDVKVSFTRGWDSKTDFAQLLESQYPRDLATGHTVSGPHKADLRLRVGSLPAQDAMSRGQLKLLVCALRIAQGKLLKQQIDKHSIYLVDDLPSELDAQHRQLLLKQLVDTGAQVFVTAIEPAAIVDSLHMPPSRMFHVEQGRVTVIE

Annotated regions:
phrase: LIRLNIDSFRNIQLAQLSPSSGINLIYGQNGSGKTSILEAIYFLGMGRSFRSHLSQRVINNEQDKLTLFATLNLPRGDSKIGLRRFRSGETEVKIDGEKVKRLSTLAETLPIQVITPESFSLLFEGPKSRRQFIDWGAFHSDPQFYAAWVNVRRVLKQRNQLLRNNSSYDQIQYWDREFVRYTEQVTEIRNRYVDSLNELLKGIIGEFLPQVDVKVSFTRGWDSKTDFAQLLESQYPRDLATGHTVSGPHKADLRLRVGSLPAQDAMSRGQLKLLVCALRIAQGKLLKQQIDKHSIYLVDDLPSELDAQHRQLLLKQLVDTGAQVFVTAIEPAAIVD
type: DOMAIN
name: RecF/RecN/SMC_N
description: RecF/RecN/SMC, N-terminal

phrase: ITPESFSLLFEGPKSRRQFI
type: CONSERVED_SITE
name: DNA-binding_RecF_CS
description: DNA-binding, RecF, conserved site

phrase: IYLVDDLPSELDAQHRQL
type: CONSERVED_SITE
name: DNA-binding_RecF_CS
description: DNA-binding, RecF, conserved site
Protein sequence:
MSQLDVLIVDDEESIRNLIAANLKDEGFNPKVAANSTQALKILSEKPVSAVVLDIWLQGSEIDGLGILEIIKKRYPLMPVIIISGHGTIETAVNAIKMGAYDYIEKPFNNDKLVILLTRACEVTKLKRENIDLKSKVIDKTELVGECSVTLKYKMAIAKAATSSCRIMIHGKVGSGKELAARLIHKQSKRVNNPFIIFSPTCMTTEKINQELFGELEKQANNKRPTILEFANNGTLYIDEVSNIPIPIQVKLLKFLKDQTITKPCGKNIKIDIKIITGTSKNIQDEVNNGKFLEDLYYRLNVSSLKVPSLYERKEDIPLLVKYFVKQLSKFSGLKERSFADETIAALQSYEWPGNIRQLRNVVEWTLIMNPLTTGNNEIIKPYMIPSEILANSANLTKLEDSFDMLSMPLREAREVFERQYLSAQMSRFNNNISKTSSFVGMERSALHRKLKLLSLHIPPTNRINDEEYEEANA

Annotated regions:
phrase: WPGNIRQLR
type: CONSERVED_SITE
name: Sigma_54_int_dom_CS
description: Sigma-54 interaction domain, conserved site

phrase: GECSVTLKYKMAIAKAATSSCRIMIHGKVGSGKELAARLIHKQSKRVNNPFIIFSPTCMTTEKINQELFGELEKQANNKRPTILEFANNGTLYIDEVSNIPIPIQVKLLKFLKDQTITKPCGKNIKIDIKIITGTSKNIQDEVNNGKFLEDLYYRLNVSS
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: DVLIVDDEESIRNLIAANLKDEGFNPKVAANSTQALKILSEKPVSAVVLDIWLQGSEIDGLGILEIIKKRYPLMPVIIISGHGTIETAVNAIKMGAYDYIEKPFNNDKLVILLTRA
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: REVFERQYLSAQMSRFNNNISKTSSFVGMERSALHRKL
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: SSCRIMIHGKVGSGKELAARLIHKQSKRVNNPFIIFSPTCMTTEKINQELFGELEKQANNKRPTILEFANNGTLYIDEVSNIPIPIQVKLLKFLKDQTITKPCGKNIKIDIKIITGTSKNIQDEVNNGKFLEDLYYRLN
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VLIVDDEESIRNLIAANLKDEGFNPKVAANSTQALKILSEKPVSAVVLDIWLQGSEIDGLGILEIIKKRYPLMPVIIISGHGTIETAVNAIKMGAYDYIEKPFNNDKLV
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: LDVLIVDDEESIRNLIAANLKDEGFNPKVAANSTQALKILSEKPVSAVVLDIWLQGSEIDGLGILEIIKKRYPLMPVIIISGHGTIETAVNAIKMGAYDYIEKPFNNDKLVIL
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: LVGECSVTLKYKMAIAKAATSSCRIMIHGKVGSGKELAARLIHKQSKRVNNPFIIFSPTCMTTEKINQELFGELEKQANNKRPTILEFANNGTLYIDEVSNIPIPIQVKLLKFLKDQTITKPCGKNIKIDIKIITGTSKNIQDEVNNGKFLEDLYYRLNVSSLKVPSLYERKEDIPLLVKYFVKQLSKFSGLKERSFADETIAALQSYEWPGNIRQLRNVVEWTL
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain
Protein sequence:
MASSQQAVRETGRGRASSSSAGGRKVTFGYHLVEGKTPHGMEDLHVAEFRRLDDGNEDGGDGGSTAVTAILINGETLAVANVGDSRAVAFDVRAGRAQQLSVDHEPLRERDAIEHCGGFVTEIHGDVPRVDAQLATSRAFGDRQIKEHISSDPNVTIEDVGGRRRRWWHGARRPRQRRGVEECFLQRLAEYAICIHGASMEHRNFHVHSSHVHYFEIPPFKEV

Annotated regions:
phrase: MASSQQAVRETGRGRASSSSAGGRKVTFGYHLVEGKTPHGMEDLHVAEFRRLDDGNEDGGDGGSTAVTAILINGETLAVANVGDSRAVAFDVRAGRAQQLSVDHEPLRERDAIEHCGGFVTEIHGDVPRVDAQLATSRAFGDRQIKEHISSDPNVTIEDVGGRRRRWWHGARRPRQRRGVEECFLQRLAEYAICIHGASMEHRNFHVHSSH
type: DOMAIN
name: PPM-type_phosphatase-like_dom
description: PPM-type phosphatase-like domain

phrase: STAVTAILINGETLAVANVGDSRAVAFDVRAGRAQQLSVDHEPLRERDAIEHCGGFVTEIHGDVPRVDAQLATSRAFGDRQIKEHISSDPNVTIED
type: DOMAIN
name: PPM-type_phosphatase-like_dom
description: PPM-type phosphatase-like domain

phrase: DGGDGGSTAVTAILINGETLAVANVGDSRAVAFDVRAGRAQQLSVDHEPLRERDAIEHCGGFVTEIHGDVPRVDAQLATSRAFGDRQIKEHISSDPNVT
type: DOMAIN
name: PPM-type_phosphatase-like_dom
description: PPM-type phosphatase-like domain
Protein sequence:
MPVKVIEGLPAIDDLRADNIFVMNDERAKNQNIRPLNLLVVNLMPRKLITERQILRLLSNTPLQINVEFLYMTSHDFKNTKQGHLDSFYKSFSEIKSQYYDGLIVTGAPVEQLNFEEVDYWSELLKIIDWSKSHVYSSLHICWGAQAALYARYGVTKENLPQKLCGIYKSSVEQPKNPLFRGFDDFFNYPQSRYTQSNPSEIKKVPDLEVLSSSKETGFSILAKKNLREIYLFGHLEYDRETLAWEYERDKEEGLKPNLPQNYFPENDDKNKPKSTWASAASLFFSNWLNYAVYQGTPYLGERLSQHLNEENYDFNQKEQK

Annotated regions:
Protein sequence:
MPPLEDTIAALATPAGISALAILRASGPDTRRIAEAILGRTPLPRRIQRVDYRDRAGHILDEVLCVFFPQPRSYTGEDLLEISTHGNPFIAQRVLQDLFARGCRPAGPGEFTQRAFLNGRLDLSQAEAVMDLIHAQSDRALAAANHQLRGSLGRHVQRIIDRVVRVLAQVEAYIDFPDEDLPSSNRDTLAAELEMARHEAEQLIATQRYGNLIRDGIKTVIVGAPNVGKSSLLNRLVGRERALVSAEPGTTRDFIEERIAVGEHCIRLVDTAGLNVSPAPLEALGIHKSLEQLADADLVLAIVDLSDPEPSLPPELAKRLDPKNTLLVANKIDLCAGKCVLDTVDQWFGMVFCSAKIGVGLDDLFGAIGRWADQWQITVGQDVIAVNARHSHALALALEALDAALDKLRSGDAAELLASDLRSALLALGDIAGRVDNERVLDELFATFCIGK

Annotated regions:
phrase: TVIVGAPNVGKSSLLNRLVGRERALVSAEPGTTRDFIEERIAVGEHCIRLVDTAGLNVSPAPLEALGIHKSLEQLADADLVLAIVDLSDPEPSLPPELAKRLDPKNTLLVAN
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: LSQAEAVMDLIHAQSDRALAAANHQLRGSLGRHVQRIIDRVVRVLAQVEAYIDFPDEDLPSSNRDTLAAELEMARHEAEQLIATQRYGNLIRDGIKTVIVGAPNVGKSSLLNRLVGRERALVSAEPGTTRDFIEERIAVGEHCIRLVDTAGLNVSPAPLEALGIHKSLEQLADADLVLAIVDLSDPEPSLPPELAKRLDPKNTLLVANKIDLCAGKCVLDTVDQWFGMVFCSAKIGVGLDDLFGAIGRWADQWQITVGQDVIAVNARHSHALALALEALDAALDKLRSGDAAELLASDLRSALLALGDIAGRVDNERVLDELFATF
type: DOMAIN
name: MnmE_helical
description: MnmE, helical domain

phrase: TIAALATPAGISALAILRASGPDTRRIAEAILGRTPLPRRIQRVDYRDRAGHILDEVLCVFFPQPRSYTGEDLLEISTHGNPFIAQRVLQDLFARGCRPAGPGEFTQRAFLNG
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal

phrase: RDGIKTVIVGAPNVGKSSLLNRLVGRERALVSAEPGTTRDFIEERIAVGEHCIRLVDTAGLNVSPAPLEALGIHKSLEQLADADLVLAIVDLSDPEPSLPPELAKRLDPKNTLLVANKIDLCAGKCVLDTVDQWFGMVFCSAKIGVGLDD
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain

phrase: DTIAALATPAGISALAILRASGPDTRRIAEAILGRTPLPRRIQRVDYRDRAGHILDEVLCVFFPQPRSYTGEDLLEISTHGNPFIAQRVLQDLFARGCRPAGPGEFTQRAFLN
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal

phrase: IKTVIVGAPNVGKSSLLNRLVGRERALVSAEPGTTRDFIEERIAVGEHCIRLVDTAGLNVSPAPLEALGIHKSLEQLADADLVLAIVDLSDPEPSLPPELAKRLDPKNTLLVANKIDLCAGKCVLDTVDQWFGMVFCSAKIGVGLDD
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: GIKTVIVGAPNVGKSSLLNRLVGRERALVSAEPGTTRDFIEERIAVGEHCIRLVDTAGLNVSPAPLEALGIHKSLEQLADADLVLAIVDLSDPEPSLPPELAKRLDPKNTLLVANKIDLCAGKCVLDTVDQWFGMVFCSAKIGVGLDDLFGAIGRWA
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain
Protein sequence:
MSTTAYPDTILIIDFGSQVTQLIARRVREANVYCEIVPFQSADEAFKRLQPKGVILSGSPHSTTDIGSPRAPQAIFDAGIPVLGICYGEQTMCAQLGGNVESGHDREFGRAFLDVQEDSPLFAGIWAKGTRHQVWMSHGDRVTSLPDGFTIIGTSPNAPYAVIADEKRKYYGVQFHPEVVHTPDGAKLLQNFVHRIVGVKPGWTMGAYREQAVEAIRKQVGSGKVICALSGGVDSSVAALLAHEAVGDQLTCILVDHGLMRKDEAQQVVEMFREHYNLPLILVDASDRFIGALESESDPEKKRKTIGRLFIEVFEEEARKLGGADFLVQGTLYPDVIESVSFTGGPSVTIKSHHNVGGLPERMKMQLVEPLRELFKDEVRLLGKELGLPDSFIGRHPFPGPGLAIRCPGGVTREKLEILREADAIYLDEIRKAGLYDAIWQAFAVLLPVQTVGVMGDGRTYEFVCALRAVTSVDGMTADFYHYDMNFLGNAATRIINEVRGINRVVYDVTSKPPGTIEWE

Annotated regions:
phrase: IRKQVGSGKVICALSGGVDSSVAALLAHEAVGDQLTCILVDHGLMRKDEAQQVVEMFREHYNLPLILVDASDRFIGALESESDPEKKRKTIGRLFIEVFEEEARKLGGADFLVQGTLYPDVIESVSFTGGPSVTIKSHHNVGGLPERMKMQLVEPLRELFKDEVRLLGKELGLPDSFIGRHPFPGPGLAIRCPGGVTREKLEILREADAIYLDEIRKAGLYDAIWQAFAVLLPVQTVGVMGDGRTYEFVCALRAVTSVDGMTADFYHYDMNFLGNAATRIINEVRGINRVVYDVTSKPPGTIEW
type: DOMAIN
name: GMP_synth_C
description: GMP synthase, C-terminal

phrase: WTMGAYREQAVEAIRKQVGSGKVICALSGGVDSSVAALLAHEAVGDQLTCILVDHGLMRKDEAQQVVEMFREHYNLPLILVDASDRFIGALESESDPEKKRKTIGRLFIEVFEEEARKLGGADFLVQGTLYPDVIESVSFTGGPSVTIKSHHNVGGLPERMKMQLVEPLRELFKDEVRLLGKELGLPDSFIG
type: DOMAIN
name: GMPS_ATP_PPase_dom
description: GMP synthetase ATP pyrophosphatase domain

phrase: ILIIDFGSQVTQLIARRVREANVYCEIVPFQSADEAFKRLQPKGVILSGSPHSTTDIGSPRAPQAIFDAGIPVLGICYGEQTMCAQLGGNVESGHDREFGRAFLDVQEDSPLFAGIWAKGTRHQVWMSHGDRVTSLPDGFTIIGTSPNAPYAVIADEKRKYYGVQFHPEVVHTPDGAKLLQNFVHRIVG
type: DOMAIN
name: GMP_synth_GATase
description: GMP synthase, glutamine amidotransferase

phrase: EAIRKQVGSGKVICALSGGVDSSVAALLAHEAVGDQLTCILVDHGLMRKDEAQQVVE
type: DOMAIN
name: NAD/GMP_synthase
description: NAD/GMP synthase

phrase: EQAVEAIRKQVGSGKVICALSGGVDSSVAALLAHEAVGDQLTCILVDHGLMRKDEAQQVVEMFREHYNLPLILVDASDRFIGALESESDPEKKRKTIGRLFIEVFEEEARKLGGADFLVQGTLYPDVIESVSFTGGPSVTIKSHHNVGGLPERMKMQLVEPLRELFKDEVRLLGKELGLPDSFIGRHPFPGPGLAIRCPGGVTREKLEILREADAIYLDEIRKAGLYDAIWQAFAVLLPVQTVGVMGDGRTYEFVCALRAVTSVDGMTADFYHYDMNFLGNAATRIINEVRGINRVVYDVTSKPPGTIEW
type: DOMAIN
name: GMP_synth_C
description: GMP synthase, C-terminal

phrase: LIIDFGSQVTQLIARRVREANVYCEIVPFQSADEAFKRLQPKGVILSGSPHSTTDIGSPRAPQAIFDAGIPVLGICYGEQTMCAQLGGNVESGHDREFGRAFLDVQEDSPLFAGIWAKGTRHQVWMSHGDRVTSLPDGFTIIGTSPNAPYAVIADEKRKYYGVQFHPEVVHTPDGAKLLQNFV
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: ILIIDFGSQVTQLIARRVREANVYCEIVPFQSADEAFKRLQPKGVILSGSPHSTTDIGSPRAPQAIFDAGIPVLGICYGEQTMCAQLGGNVESGHDREFGRAFLDVQEDSPLFAGIWAKGTRHQVWMSHGDRVTSLPDGFTIIGTSPNAPYAVIADEKRKYYGVQFHPEVVHTPDGAKLLQNF
type: DOMAIN
name: GMP_synth_GATase
description: GMP synthase, glutamine amidotransferase

phrase: DEIRKAGLYDAIWQAFAVLLPVQTVGVMGDGRTYEFVCALRAVTSVDGMTADFYHYDMNFLGNAATRIINEVRGINRVVYDVTSKPPGTIE
type: DOMAIN
name: GMP_synth_C
description: GMP synthase, C-terminal