nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MCAKKEEEEEEEEDSSEAMNNIQNYQNDLFFHQLISHHHHHHHDPSQSETLGASGNVGSGFTIFSQDSVSPIWSLPPPTSIQPPFDQFPPPSSSPASFYGSFFNRSRAHHQGLQFGYEGFGGATSAAHHHHEQLRILSEALGPVVQAGSGPFGLQAELGKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRETSVISETNLVPTESDELTVAFTEEEETGDGRFVIKASLCCEDRSDLLPDMIKTLKAMRLKTLKAEITTVGGRVKNVLFVTGEESSGEEVEEEYCIGTIEEALKAVMEKSNVEESSSSGNAKRQRMSSHNTITIVEQQQQYNQR

Annotated regions:
phrase: KSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKEL
type: DOMAIN
name: bHLH_dom
description: Myc-type, basic helix-loop-helix (bHLH) domain

phrase: SEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKELKRETS
type: DOMAIN
name: bHLH_dom
description: Myc-type, basic helix-loop-helix (bHLH) domain

phrase: AASKSHSEAERRRRERINNHLAKLRSILPNTTKTDKASLLAEVIQHVKE
type: DOMAIN
name: bHLH_dom
description: Myc-type, basic helix-loop-helix (bHLH) domain
Protein sequence:
METVQLRNPPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFMDFVRQCLVKSPDQRATATQLLQHPFVKSAKGVSILRDLINEAMDVKLKRQEAQQREVDQDDEENSEEDELDSGTMVRAVGDDMGTVRVASTMSDEANTMIEHDDTLPSQLGTMVINAEDEEEEGTMKRRDETMQPAKPSFLEYFEQKEKENQISSFGKSVPGPLKNSADWKVPQDGDYEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQSKRQPILDAIEAKKRRQQNF

Annotated regions:
phrase: YEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQSKRQPILDAIEA
type: DOMAIN
name: SARAH_dom
description: SARAH domain

phrase: DVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFMDFVRQCLVKSPDQRATATQLLQHPF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: LGEGSYGSVYKAIHKETGQIVAI
type: BINDING_SITE
name: Protein_kinase_ATP_BS
description: Protein kinase, ATP binding site

phrase: FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFMDFVRQCLVKSPDQRATATQLLQHPF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFMDFVRQCLVKSPDQRATATQLLQHPF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: YEFLKSWTVEDLQKRLLALDPMMEQEIEEIRQKYQSKRQPILDAIEA
type: DOMAIN
name: Mst1_2_SARAH_domain
description: Mst1/2 SARAH domain
Protein sequence:
MGLNLRKNHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLIMQIITGLLLAMHYTADTSLAFASVAHMCRDVQFGWLIRNLHANGASFFFICIYLHIGRGFYYGSYLNKETWNIGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWLWGGFSVDNPTLTRFFAFHFLLPFVIAGLTLVHLTFLHETGSNNPLGIPSDCDKIPFHPYYSIKDLLGFALMLIPLITLALFSPNLLGDPENFTPANPLATPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLVLFLIPLLHVSKQRSMTFRPLSQILFWTLVADLLILTWVGSQPVEHPFIIIGQLASFAYFAIILILFPVVSALENKILKL

Annotated regions:
phrase: PLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLIMQIITGLLLAMHYTADTSLAFASVAHMCRDVQFGWLIRNLHANGASFFFICIYLHIGRGFYYGSYLNKETWNIGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWLWGGFSVDNPTLTRFFAFHFLLPFVIAGLTLVHLTFLHETGS
type: DOMAIN
name: Cytochrome_b_N_euk/bac
description: Cytochrome b/b6, N-terminal domain, eukaryotic/bacterial

phrase: MGLNLRKNHPLLKIINNSLIDLPTPSNISAWWNFGSLLGLCLIMQIITGLLLAMHYTADTSLAFASVAHMCRDVQFGWLIRNLHANGASFFFICIYLHIGRGFYYGSYLNKETWNIGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWLWGGFSVDNPTLTRFFAFHFLLPFVIAGLTLVHLTFLHETGSNNP
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: GIPSDCDKIPFHPYYSIKDLLGFALMLIPLITLALFSPNLLGDPENFTPANPLATPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLVLFLIPLLHVSKQRSMTFRPLSQILFWTLVADLLILTWVGSQPVEHPFIIIGQLASFAYFAIILILFPVVSALENKILK
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: IDLPTPSNISAWWNFGSLLGLCLIMQIITGLLLAMHYTADTSLAFASVAHMCRDVQFGWLIRNLHANGASFFFICIYLHIGRGFYYGSYLNKETWNIGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWLWGGFSVDNPTLTRFFAFHFLLPFVIAGLTLVHLTFLHET
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: NPLGIPSDCDKIPFHPYYSIKDLLGFALMLIPLITLALFSPNLLGDPENFTPANPLATPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLVLFLIPLLHVSKQRSMTFRPLSQILFWTLVADLLILTWVGSQPVEHPFIIIGQL
type: DOMAIN
name: Cytochrome_b_C_euk/bac
description: Cytochrome b/b6, C-terminal domain, eukaryotic/bacterial

phrase: PANPLATPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLVLFLIPLLHVSKQRSMTFRPLSQILFWTLVADLLILTWVGSQPVEHPFIIIGQLASFAY
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal
Protein sequence:
MSQDFVIEAFPRDDQGKGASRRLRREERKIPAIIYGGGKDATPVAIWHNELKKAIENEAFFSHILTVDIQGKKESVILKDLQRHPYKPILTHADFLRVDKDHEIHVNVPLHFINEDTAPAVKLQGGIVSHTMTEVEVICLPQNLPEFIEVDLNEVEMDQVVHLSDLKLPKGVKVAALQQGEDHDLPVASIHKPKGAKADDAEGEEGEEGGEE

Annotated regions:
phrase: VIEAFPRDDQGKGASRRLRREERKIPAIIYGGGKDATPVAIWHNELKKAIENEAFFSHILTVDIQGKKESVILKDLQRHPYKPILTHADFL
type: DOMAIN
name: Ribosomal_L25_dom
description: Large ribosomal subunit protein bL25, L25 domain

phrase: EIHVNVPLHFINEDTAPAVKLQGGIVSHTMTEVEVICLPQNLPEFIEVDLNEVEMDQVVHLSDLKLPKGVKVAALQQGEDHDLPVASIHKP
type: DOMAIN
name: Ribosomal_bL25_b-dom
description: Large ribosomal subunit protein bL25, beta domain

phrase: IEAFPRDDQGKGASRRLRREERKIPAIIYGGGKDATPVAIWHNELKKAIENEAFFSHILTVDIQGKKESVILKDLQRHPYKPILTHAD
type: DOMAIN
name: Ribosomal_L25_dom
description: Large ribosomal subunit protein bL25, L25 domain
Protein sequence:
MTKSAELYQKAQQTIPGGVNSPVRAFNGVGGSPIFVERADGAFIFDADGKAYIDYVGSWGPMILGHNHAVIREAVIEAAQRGLSFGAPTEMEIKMAELVSELVPSMEQLRMVSSGTEATMSAIRLARGFTGRDKILKFEGCYHGHADSLLVKAGSGALTLGQPSSPGVPADFAKHTLTATFNDLDSVRELFAANKGEIACIIVEPVAGNMNCIPPVEGFHEGLREICDQEGALLIFDEVMTGFRVALGGAQAHYNIKPDLTTLGKVIGGGMPVGAFGGRKEVMQYIAPTGPVYQAGTLSGNPVAMAAGYACLTLLREEGNEKRLASKTKHLADGFKSLAAQHGIPLVVNQVGGMFGFFFTEQEQITCYEDVTKCDIERFKRFFHLMIDHGVYLAPSAFEASFTSLAHGSKEIEATLEAADRCFAILAAESK

Annotated regions:
phrase: LIFDEVMTGFRVALGGAQAHYNIKPDLTTLGKVIGG
type: CONSERVED_SITE
name: Aminotrans_3_PPA_site
description: Aminotransferases class-III pyridoxal-phosphate attachment site
Protein sequence:
MASNNVGRVTQILGAVVDVQFDGELPFIQNALQTRIGDRTLILEVAQELGERTVRAIAMDSTDGLVRGAEVEDLGRPITVPVGPGTLGRILNVIGEPIDERGPVDAKKTYSIHREAPSFEEQAASAEILVTGIKVVDLLAPYLKGGKIGLFGGAGVGKTVLIQELINNIAKAHGGVSVFAGVGERTREGNDLYHEMIDAGVIKLGENTTEGSKVALVYGQMNEPPGARARVALSGLSIAEYFRDEEGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERITSTKKGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLNRAISEKGIYPAVDPLDSTSRSLDPRIVGEEHYKVARDVQRILQTYKSLQDIIAILGMDELSEEDKLTVARARKIERFMSQPFHVAEVFTGSPGVFVSIEDTVRSFKEIVEGKHDDLPEAAFLMVGTIEDARKKAEALKAKA

Annotated regions:
phrase: GIKVVDLLAPYLKGGKIGLFGGAGVGKTVLIQELINNIAKAHGGVSVFAGVGERTREGNDLYHEMIDAGVIKLGENTTEGSKVALVYGQMNEPPGARARVALSGLSIAEYFRDEEGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERITSTKKGSITSVQAIYVPADDLTDPAPATSFAHLDATTVLNRAISEKGIYPAVDPLDST
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_nucl-bd
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain

phrase: PRIVGEEHYKVARDVQRILQTYKSLQDIIAILGMDELSEEDKLTVARARKIERFMSQPFHVAEVFTGSPGVFVSIEDTVRSFKEIVE
type: DOMAIN
name: ATP-synt_VA_C
description: ATP synthase A/B type, C-terminal domain

phrase: PAVDPLDST
type: ACTIVE_SITE
name: ATPase_a/bsu_AS
description: ATPase, alpha/beta subunit, nucleotide-binding domain, active site

phrase: VTQILGAVVDVQFDGELPFIQNALQTRIGDRTLILEVAQELGERTVRAIAMDSTDGLVRGAEVEDL
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_N
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain

phrase: KGGKIGLFGGAGVGKTVLIQELINNIAKAHGGVSVFAGVGERTREGNDLYHEMIDAGVIKLGENTTEGSKVALVYGQMNEPPGARARVALSGLSIAEYFRDEEGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGALQERITSTKKGSITSVQAIYVPADDLTDPAPATSFAHLDA
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain
Protein sequence:
MARLQKFYKEEVIKKLQSELGLKNVMEVPRLEKITINMGVGEAVNDKKIMDNAVRDLALISGQKPVVTKSKKSIAGFKIRDGWAIGCKVTLRRQQMYEFLDRLINVSLPRTRDFRGLNPKSFDGRGNYTFGVKEHIIFPEIDFEKTDAIRGMDITFTTSAKDNAQAKALLEAFGFPFRG

Annotated regions:
phrase: LALISGQKPVVTKSKK
type: CONSERVED_SITE
name: Ribosomal_uL5_CS
description: Large ribosomal subunit protein uL5, conserved site

phrase: NVMEVPRLEKITINMGVGEAVNDKKIMDNAVRDLALISGQKPVVTKSKKSIAGFKI
type: DOMAIN
name: Ribosomal_uL5_N
description: Large ribosomal subunit protein uL5, N-terminal

phrase: IGCKVTLRRQQMYEFLDRLINVSLPRTRDFRGLNPKSFDGRGNYTFGVKEHIIFPEIDFEKTDAIRGMDITFTTSAKDNAQAKALLEAFGFP
type: DOMAIN
name: Ribosomal_uL5_C
description: Large ribosomal subunit protein uL5, C-terminal
Protein sequence:
MAKWTINDSSKIYNIDNWGAELFSINKKGNVCVHPSPNSKYSIDLKVLVDDLIKRKIKPPILLRFMNILEGRIASISRVFKNAISDNNYPAKYQTFYPIKVNQQRQVVEAIANFGKKYNIGLEVGSKPELVAAISMSTGNNLPILCNGYKDTEFIETVLFATRVGYDITIVVEKLFELEKIVEVSKRTGIVPKLGIRVKLSSKGIGKWSTSGGDDAKFGLRISELIAAIEMLKQNDMLDSVKLLHFHVGSQITKIDKIKNALIEGTRIYAEMRKLGVNLEFLDIGGGLGVDYDGSKSSYFSSVNYSLEEYANDVIYQVKNICDDAGVPCPNIISESGRATVAHYSVLVTDVLNNNTQTLMPDFESILTESEKLSPTVKKLVDIYKSIDKHSLREDYHDTIQLIQESVSLFNLGYLNMAERANAEWICSKIIRKINSIVEKMKPIPDELQNFQLSLRQTYFANFSLFQSIPDSWAIDQLFPIVPIQRLDEKPDVLTSIADITCDSDGEITSFVGENGRTKALPLHKIKVDEQYYIGFFLIGAYQEILGDMHNLFGDTNAVHITFNKKTNYKIDTVITGDATWESLKYVQYDSQEILKRVRNNLEKDVSLQKVSIEESSHFLELLDKTLQSYTYLGE

Annotated regions:
phrase: DNNYPAKYQTFYPIKVNQQRQVVEAIANFGKKYNIGLEVGSKPELVAAISMSTGNNLPILCNGYKDTEFIETVLFATRVGYDITIVVEKLFELEKIVEVSKRTGIVPKLGIRVKLSSKGIGKWSTSGGDDAKFGLRISELIAAIEMLKQNDMLDSVKLLHFHVGSQITKIDKIKNALIEGTRIYAEMRKLGVNLEFLDIGGGLGVDYDGSKSSYFSSVNYSLEEYANDVIYQVKNICDDAGVPCPNIISESGRATV
type: DOMAIN
name: De-COase2_N
description: Orn/DAP/Arg decarboxylase 2, N-terminal

phrase: LKYVQYDSQEILKRVRNNLEKDVSLQKVSIEESSHFLELLDKTLQSYTY
type: DOMAIN
name: Arg_decarbox_C
description: Arginine decarboxylase, C-terminal helical

phrase: YPIKVNQQRQVVEAIANF
type: BINDING_SITE
name: De-COase2_pyr-phos_BS
description: Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site

phrase: EKLSPTVKKLVDIYKSIDKHSLREDYHDTIQLIQESVSLFNLGYLNMAERANAEWICSKIIRKINSIVEKMKPIPDEL
type: DOMAIN
name: Arg_decarb_HB
description: Arginine decarboxylase, helical bundle domain

phrase: GVNLEFLDIGGGL
type: CONSERVED_SITE
name: De-COase2_CS
description: Orn/DAP/Arg decarboxylase 2, conserved site
Protein sequence:
MNEQQRLASQQANSSTKKEEKDYSKYFESVYQPPSLKDAKKRGKEEVKIERDFGLPEEFRNFGTGRKFYIRTYGCQMNEHDTEVMAGIFTALGYEPTFSTEDADVVLLNTCAIRENAENKVFGELGHLKSLKRRNPDFLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNIHRLPYILKDAMFSKETVVEVWSKEGDVIENLPKVRRGDIKAWVNIMYGCDKFCTYCIVPYTRGKERSRRPEDIIQEIRHLAANGYKEITLLGQNVNAYGKDFEDIEYGLGDLMDELRKVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGSTDMLKIMARKYSREHYLELVRKIKEAIPDAVLTTDIIVGFPNETDEQFEETMSLYREVGFDTAFTFIYSPREGTPAAKMKDNVPMEVKKERLQRLNTLVNTLAIEKNSRYKGQIVEVLVDGESKNNPEVLAGYTRTNKLVNFVASKSLIGQLVKVKITEAKTWSLNGELVEEPIEVK

Annotated regions:
phrase: VNIMYGCDKFCTYCIVPYTRGKERSRRPEDIIQEIRHLAANGYKEITLLGQNVNAYGKDFEDIEYGLGDLMDELRKVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGSTDMLKIMARKYSREHYLELVRKIKEAIPDAVLTTDIIVGFPNETDEQFEETMS
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: RYKGQIVEVLVDGESKNNPEVLAGYTRTNKLVNFVASKSLIGQLVKVKITEAKTWSLNGEL
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: SRYKGQIVEVLVDGESKNNPEVLAGYTRTNKLVNFVASKSLIGQLVKVKITEAKTWSLNGELV
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: KFYIRTYGCQMNEHDTEVMAGIFTALGYEPTFSTEDADVVLLNTCAIRENAENKVFGELGHLKSLKRRNPDFLIGVCGCMSQEESVVNKIMQKNQHVDMVF
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: RRGDIKAWVNIMYGCDKFCTYCIVPYTRGKERSRRPEDIIQEIRHLAANGYKEITLLGQNVNAYGKDFEDIEYGLGDLMDELRKVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGSTDMLKIMARKYSREHYLELVRKIKEAIPDAVLTTDIIVGFPNETDEQFEETMSLYREVGFDTAFTFIYSPREGTPAAKMKDNVPMEVKKERLQRLNTLVNTLAI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: IKAWVNIMYGCDKFCTYCIVPYTRGKERSRRPEDIIQEIRHLAANGYKEITLLGQNVNAYGKDFEDIEYGLGDLMDELRKVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGSTDMLKIMARKYSREHYLELVRKIKEAIPDAVLTTDIIVGFPNETDEQFEETMSLYREVGFDTAFTFIYSPREGTPAAKMKDNVPMEVKKERLQRLN
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: VNIMYGCDKFCTYCIVPYTR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: RKFYIRTYGCQMNEHDTEVMAGIFTALGYEPTFSTEDADVVLLNTCAIRENAENKVFGELGHLKSLKRRNPDFLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNIHRLPYILKDAM
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal
Protein sequence:
MAVHLLIVDALNLIRRIHAVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKADRPPMPEELHDEMPALRAAFEQRGVPCWSASGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRLVR

Annotated regions:
phrase: VQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLR
type: DOMAIN
name: DNA_polI_H3TH
description: DNA polymerase I-like, H3TH domain

phrase: LLIVDALNLIRRIHAVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKADRPPMPEELHDEMPALRAAFEQRGVPCWSASGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIR
type: DOMAIN
name: 5-3_exonucl_a-hlix_arch_N
description: 5'-3' exonuclease, alpha-helical arch, N-terminal

phrase: VHLLIVDALNLIRRIHAVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKADRPPMPEELHDEMPALRAAFEQRGVPCWSASGNEADDLAATLAVKVTQAGHQATIVSTDKGYCQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQLRL
type: DOMAIN
name: 5-3_exonuclease
description: 5'-3' exonuclease

phrase: PQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIAR
type: DOMAIN
name: DNA_polI_H3TH
description: DNA polymerase I-like, H3TH domain

phrase: PQQLPDYWGLAGISSSKVPGVAGIGPKSATQLLVE
type: CONSERVED_SITE
name: HhH2
description: Helix-hairpin-helix motif, class 2
Protein sequence:
MSGAPPSYSFVALPPRAKDGLVVFGKNSARPRDEVQEVVYFPAVDHEAESKVECTYISIDQVPRTHAIVISRPAWLWGAEMGANEHGVCIANEAINAREPAAETEALLGMDLVRLGLERGTTAKEALDIIVSLLDEHGQGGNYYEDAHSCHSFQSAYLLVDRDEAWVLETVGKYWAAERITEGVRCICNHLSLTTKMDEEHPELRTYAQSQGWWTGEDEFNFAQVFSPADDHLDCCAGKDSLEKQEESITVQTMINILRDKASGVCIDSESFLTTASIVSVLPQNRSSPCIHYFTGTPDPSRSIFKPFIFVDDVKLVPKAQSPCFGDDDPAKKEPRFQEKPDRRHELYKAHEWARAVIESDQEQGRTLRKTMLELEKQGLEAMEEILSSPEPPDPAEVGDLFYDCVDTEMKFFK

Annotated regions:
Protein sequence:
MADLAKLVDDLSSLTVLEAAELAKMLEEKWGVSAAAAVAVAAGPAAGGAAAPAVEEKTEFTVVLAGAGDKKIEVIKEVRAITGLGLKEAKDLVEGAPKPVKESVAKDEAEKIKAQLEKAGAKVELK

Annotated regions:
phrase: AKLVDDLSSLTVLEAAELAKMLEEKWGVSAAAAVAVAAGPAAGGA
type: DOMAIN
name: Ribosomal_bL12_oligo
description: Large ribosomal subunit protein bL12, oligomerization

phrase: FTVVLAGAGDKKIEVIKEVRAITGLGLKEAKDLVEGAPKPVKESVAKDEAEKIKAQLEKAGAKVEL
type: DOMAIN
name: Ribosomal_bL12_C
description: Large ribosomal subunit protein bL12, C-terminal
Protein sequence:
MSSVADSSLITPSSYVGFDTITAQIEHRLLKRGFQFNIMVVGHSGLGKSTLINSLFASHLIDSSTGKDITKEPITKTTEIKVSYHSLVEDKVRLNVNCIDTPGFGDQINNDKVWEPIVKYIKEQHSQYLRKELTAQREKHIVDTRVHAVLYFIQPNGKGLTQLDIAALKRLTDITNVIPVIAKADTLTMDERAKFREIIQHEFKKHNFRIYPYDSDDLTPEELELNDSIRSIIPFAVVGSEKEITVNGEVVRGRKTRWGAINLEDINQCEFVYLREFLIRTHLQDLIETTALIHYESFRSKQLIALKENASSRATGHGAQSSSTNMLR

Annotated regions:
phrase: RGFQFNIMVVGHSGLGKSTLINSLFASHLIDSSTGKDITKEPITKTTEIKVSYHSLVEDKVRLNVNCIDTPGFGDQINNDKVWEPIVKYIKEQHSQYLRKELTAQREKHIVDTRVHAVLYFIQPNGKGLTQLDIAALKRLTDITNVIPVIAKADTLTMDERAKFREIIQHEFKKHNFRIYPYDSDDLTPEELELNDSIRSIIPFAVVGSEKEITVNGEVVRGRKTRWGAINLEDINQCEFVYLREFLIRTHLQDLIETTALIHYESFRSKQLI
type: DOMAIN
name: G_SEPTIN_dom
description: Septin-type guanine nucleotide-binding (G) domain

phrase: RGFQFNIMVVGHSGLGKSTLINSLFASHLIDSSTGKDITKEPITKTTEIKVSYHSLVEDKVRLNVNCIDTPGFGDQINNDKVWEPIVKYIKEQHSQYLRKELTAQREKHIVDTRVHAVLYFIQPNGKGLTQLDIAALKRLTDITNVIPVIAKADTLTMDERAKFREIIQHEFKKHNFRIYPYDSDDLTPEELELNDSIRSIIPFAVVGSEKEITVNGEVVRGRKTRWGAINLEDINQCEFVYLREFLIRTHLQDLIETTALIHYESFRSKQLIALKEN
type: DOMAIN
name: G_SEPTIN_dom
description: Septin-type guanine nucleotide-binding (G) domain
Protein sequence:
MKAVVLTVAVFFLTGSQARHFWQQDEPQSSWDRMKDFATVYLDAVKDSGRDYVTQFETSALGKQLNLKLLDNWDSLSSTVSKLREQIGPVTQEFWDKLEKDTVSLRQEMNKDLEEVKLKVQPYLDEFQKRWQEDVERYRQQVEPLGTELREGARQKLQELHEKLSPLGQELRDRARAHVDALRTHLAPYSDELRQRLAARLEALKESSSLADYQAKATEHLSALGEKAKPALEDLRQGLLPVLENLKMSFWSAVDEATKKLTTQ

Annotated regions:
Protein sequence:
MSVSGYKSDDEYSVIADKGEIGFIDYQNDGSSGCYNPFDEGPVVVSVPFPFKKEKPQSVTVGETSFDSFTVKNTMDEPVDLWTKIYASNPEDSFTLSILKPPSKDSDLKERQCFYETFTLEDRMLEPGDTLTIWVSCKPKDIGLHTTVVTVDWGSDRVERVVFLLAEDKISSSLTSNRPYSRSRRAPKKDFAVDDYVKGSRPSKVVERSFRNRLPLYEIPKEIREMIENKEFPDDLNEGLTARNYANYYKTLLIMEELQLEEDMRAYDMENVSMKRRGIYLSLEVPGLAERRPSLVHGDFIFVRHAYDDGTDHAYQGFVHRVEADEVHMKFASEFHQRHTAGSVYNVRFTYNRINTRRLYQAVDAAEMLDPNFLFPSLHSGKRMIKTKPFVPISPALNAEQICSIEMVLGCKGAPPYVIHGPPGTGKTMTLVEAIVQLYTTQRNARVLVCAPSNSAADHILEKLLCLEGVRIKDNEIFRLNAATRSYEEIKPEIIRFCFFDELIFKCPPLKALTRYKLVVSTYMSASLLNAEGVNRGHFTHILLDEAGQASEPENMIAVSNLCLTETVVVLAGDPRQLGPVIYSRDAESLGLGKSYLERLFECDYYCEGDENYVTKLVKNYRCHPEILDLPSKLFYDGELVASKEDTDSVLASLNFLPNKEFPMVFYGIQGCDEREGNNPSWFNRIEISKVIETIKRLTANDCVQEEDIGVITPYRQQVMKIKEVLDRLDMTEVKVGSVEQFQGQEKQVIIISTVRSTIKHNEFDRAYCLGFLSNPRRFNVAITRAISLLVIIGNPHIICKDMNWNKLLWRCVDNNAYQGCGLPEQEEFVEEPFKQEGSSNGPQYPPEAEWNNSGELNNGGANENGEWSDGWNNNGGTKEKNEWSDGWNSNGGGTKKKDEWSDGWDNNGGTNGINQEGSSNAPQDPQEAEWNDSGEVKNGGTKEKDVRSDGWNNNGGKNEKEECCDGWKDGGSGEEIKNGGKFETRGDFVAKEEDEWSDGWK

Annotated regions:
phrase: YDMENVSMKRRGIYLSLEVPGLAERRPSLVHGDFIFVRHAYDDGTDHAYQGFVHRVEADEVHMKFASEFHQRHTAGSVYNVR
type: DOMAIN
name: MOV-10-like_beta-barrel
description: Helicase MOV-10-like, beta-barrel domain

phrase: ALTRYKLVVSTYMSASLLNAEGVNRGHFTHILLDEAGQASEPENMIAVSNLCLTETVVVLAGDPRQLGPVIY
type: DOMAIN
name: DNA2/NAM7_AAA_11
description: DNA2/NAM7 helicase, helicase domain

phrase: LNAEQICSIEMVLGCKGAPPYVIHGPPGTGKTMTLVEAIVQLYTTQRNARVLVCAPSNSAADHILEKLLCLEGVRIKDNEIFRLNAA
type: DOMAIN
name: DNA2/NAM7_AAA_11
description: DNA2/NAM7 helicase, helicase domain

phrase: GKSYLERLFECDYYCEGDENYVTKLVKNYRCHPEILDLPSKLFYDGELVASKEDTDSVLASLNFLPNKEFPMVFYGIQGCDEREGNNPSWFNRIEISKVIETIKRLTANDCVQEEDIGVITPYRQQVMKIKEVLDRLDMTEVKVGSVEQFQGQEKQVIIISTVRSTIKHNEFDRAYCLGFLSNPRRFNVAITRAISLLVIIGN
type: DOMAIN
name: DNA2/NAM7-like_C
description: DNA2/NAM7 helicase-like, C-terminal

phrase: CHPEILDLPSKLFYDGELVASKEDTDSVLASLNFLPNKEFPMVFYGIQGCDEREGNNPSWFNRIEISKVIETIKRLTANDCVQEEDIGVITPYRQQVMKIKEVLDRLDMTEVKVGSVEQFQGQEKQVIIISTVRSTIKHNEFDRAYCLGFLSNPRRFNVAITRAISLLVIIGNPHIICKDMNWNKLLWR
type: DOMAIN
name: SF1_C_Upf1
description: Upf1-like, C-terminal helicase domain

phrase: ALNAEQICSIEMVLGCKGAPPYVIHGPPGTGKTMTLVEAIVQLYTTQRNARVLVCAPSNSAADHILEKLLCLEGVRIKDNEIFRLNAATRSYEEIKPEIIRFCFFDELIFKCPPLKALTRYKLVVSTYMSASLLNAEGVNRGHFTHILLDEAGQASEPENMIAVSNLCLTETVVVLAGDPRQLGPVIYSRDAESLGLGKSYLERLFECDYYCEGDENYVTKLVKNY
type: DOMAIN
name: MOV-10/SDE3_DEXXQ/H-box
description: Helicase MOV-10/SDE3, DEXXQ/H-box helicase domain
Protein sequence:
MTEYTPMIKQYLEIKDKYQDAFLFFRLGDFYEMFFEDALNASQILEITLTGREGGTKEKIPMCGVPYHSASGYIDTLIEKGYKVAICEQVEDPKTTKGMVKREVVQLISPGTVMDERGLKAKENNYIASLYCYEAKEYGFAYSDLSTGELKSTVIEASEDRLINELTTLSTRELIVSSSEKEVLSDVMKEQLGLTFSVHEEDTIPVENEKLVTRHMSLSEKRAIGKLLHYLKETQKRDLGHLQQAVHYETSNYMKMDYYSKRNLELAESIRGKGRQGTLLWLLDNTQTAMGGRMLKQWIDRPLIDRKKIIDRQNDVSELMAHFFERLELVENLKNVYDLERLAGRVAYGNVNARDLIQLRNSLYQIPRIRATLLSMSSESLTELANQLDPCEELTEKLEEAIMDSAPISIREGGIIKDGYNSQLDTYRDASRNGKTWIAELERKERELTGIKTMKVGFNRVFGYYIEVTRANTHLLPEGRYERKQTLTNAERYITPELKEKEKLILDAEEKSMELEYQLFSEVREMVKDYIERLQKLAKSVSEIDCLQSFADISEKNHFIRPTLSEDGSLHVKQGRHPVVEKVMGAQSYVANDCDLDENREILLITGPNMSGKSTYMRQVALTAICAQVGCFVPAEEAILPIFDQIFTRIGAADDLIAGQSTFMVEMLEARNAIVHATKDSLILFDEIGRGTATYDGMALAQAIIEYIHENVHAKTLFSTHYHELTDLEKELSGLQNIHVSAVEENGKVVFLHKIKEGPADKSYGIHVAELAELPKSLIERASRILEQLENDDKKIIIASVKQPEEVHEEVQLSMFPVEPEKKASSKETKLLKEIASMNIMQMTPMDAMNKLYELQSKIH

Annotated regions:
phrase: GYNSQLDTYRDASRNGKTWIAELERKERELTGIKTMKVGFNRVFGYYIEVTRANTHLLPEGRYERKQTLTNAERYITPELKEKEKLILDAEE
type: DOMAIN
name: DNA_mismatch_repair_MutS_clamp
description: DNA mismatch repair protein MutS, clamp

phrase: RNLELAESIRGKGRQGTLLWLLDNTQTAMGGRMLKQWIDRPLIDRKKIIDRQNDVSELMAHFFERLELVENLKNVYDLERLAGRVAYGNVNARDLIQLRNSLYQIPRIRATLLSMSSESLTELANQLDPCEELTEKLEEAIMDSAPISIREGGIIKDGYNSQLDTYRDASRNGKTWIAELERKERELTGIKTMKVGFNRVFGYYIEVTRANTHLLPEGRYERKQTLTNAERYITPELKEKEKLILDAEEKSMELEYQLFSEVREMVKDYIERLQKLAKSVSEIDCLQSF
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: REILLITGPNMSGKSTYMRQVALTAICAQVGCFVPAEEAILPIFDQIFTRIGAADDLIAGQSTFMVEMLEARNAIVHATKDSLILFDEIGRGTATYDGMALAQAIIEYIHENVHAKTLFSTHYHELTDLEKELSGLQNIHVSAVEENGKVVFLHKIKEGPADKSYGIHVAELAELPKSLIERASRIL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: GRQGTLLWLLDNTQTAMGGRMLKQWIDRPLIDRKKIIDRQNDVSELMAHFFERLELVENLKNVYDLERLAGRVAYGNVNARDLIQLRNSLYQIPRIRATLLSMSSESLTELANQLDPCEELTEKLEEAIMDSAPISIREGGIIKDGYNSQLDTYRDASRNGKTWIAELERKERELTGIKTMKVGFNRVFGYYIEVTRANTHLLPEGRYERKQTLTNAERYITPELKEKEKLILDAEEKSMELEYQLFSEVREMVKDYIERLQKLAKSVSEIDCLQSFADISEKNHFIRPTLSEDGSLHVKQGRHPVVEK
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: SLILFDEIGRGTATYD
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: TPMIKQYLEIKDKYQDAFLFFRLGDFYEMFFEDALNASQILEITLTGREGGTKEKIPMCGVPYHSASGYIDTLIEKGYKVAICEQVEDPKTTKGMVKREVVQLISPGTVMD
type: DOMAIN
name: DNA_mismatch_repair_MutS-lik_N
description: DNA mismatch repair protein MutS-like, N-terminal

phrase: LITGPNMSGKSTYMRQVALTAICAQVGCFVPAEEAILPIFDQIFTRIGAADDLIAGQSTFMVEMLEARNAIVHATKDSLILFDEIGRGTATYDGMALAQAIIEYIHENVHAKTLFSTHYHELTDLEKELSGLQNIHVSAVEENGKVVFLHKIKEGPADKSYGIHVAELAELPKSLIERASRILEQL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: NYIASLYCYEAKEYGFAYSDLSTGELKSTVIEASEDRLINELTTLSTRELIVSSSEKEVLSDVMKEQLGLTFSVHEEDTIPVENEKLVTRHMSLSEKRAIGKLLHYLKETQKRDLGHL
type: DOMAIN
name: DNA_mmatch_repair_MutS_con_dom
description: DNA mismatch repair protein MutS, connector domain
Protein sequence:
MPIGVPKVPYRMPGGQFTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPGKDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRMALPHSRIMIHQPSGGTRGQATDIEIEAREILRIRHQLNQIYANNTSQPLAKIEKDMDRDFFMSAQEAMEYGLIDRVIEERV

Annotated regions:
phrase: RMALPHSRIMIHQ
type: ACTIVE_SITE
name: ClpP_His_AS
description: ClpP, histidine active site

phrase: TICVGLAASMG
type: ACTIVE_SITE
name: ClpP_Ser_AS
description: ClpP, Ser active site
Protein sequence:
MGERLGIFGGTFNPVHRGHLAMARAARDRCGLDQILWVPAAQPPHKPLAGGASIGDRVEMVRLAIAGEAGMALSLVDARRPGPSYAIDTLRLLEEQYPQAQWHWLLGQDGLADLPGWYRAAELIPRCRWIVVPRPGSGADPKQAMADLTERFGAVFVPLSDFECDISSTRVREQLAAGRAGWEALLPEQVVSYIHKRGLYDVPAGA

Annotated regions:
phrase: GIFGGTFNPVHRGHLAMARAARDRCGLDQILWVPAAQPPHKPLAGGASIGDRVEMVRLAI
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: IFGGTFNPVHRGHLAMARAARDRCGLDQILWVPAAQPPHKPLAGGASIGDRVEMVRLAIAGEAGMALSLVDARRPGPSYAIDTLRLLEEQYPQAQWHWLLGQDGLADLPGWYRAAELIPRCRWIVVPRPGSGADPKQAMADLTERFGAVFVPLSDFECDISSTRVR
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain
Protein sequence:
MSDTPLRIAVTGVTGRMGKEIVTCIVKEEKQFSQEIVLGAAITRLNTNICGMDAGILINTDALGIEITDNLESIKDNFDVLVDFTAPDISIEYLKFCVNNNKNIVIGTTGFNQIHKNIILNASHKIGIVFSSNFSIGVALISKLLHKITQVIGNTSDISIIETHHNRKRDIPSGTSLTMQNIIVNALRSIHSNRIIDSNLDSTTYSPASSYKDILIHSIRAGDVVGEHTVLFAGPGERLEITHKASDRLIFAHGALRAAFWVGRDKIGLFDISDILEMDTLL

Annotated regions:
phrase: RIAVTGVTGRMGKEIVTCIVKEEKQFSQEIVLGAAITRLNTNICGMDAGILINTDALGIEITDNLESIKDNFDVLVDFTAPDISIEYLKFCVNNNKNIVIGTTGFNQIHKNIILNASHKIGIVFSSN
type: DOMAIN
name: DapB_N
description: Dihydrodipicolinate reductase, N-terminal

phrase: GVALISKLLHKITQVIGNTSDISIIETHHNRKRDIPSGTSLTMQNIIVNALRSIHSNRIIDSNLDSTTYSPASSYKDILIHSIRAGDVVGEHTVLFAGPGERLEITHKASDRLIFAHGALRAAFWVGRDKIGLFDISDI
type: DOMAIN
name: DapB_C
description: Dihydrodipicolinate reductase, C-terminal
Protein sequence:
MNILTPVADRLPSREEAEEALAVLRRWAKHTPVSDVAGLAPDVPALVYPEFSRSYPRNFTVDEAYKASLPDLQNGPASLIVGAKAVIQHVGISNFRLPIRYHTRDNGDLTLETSVTGTVSLEAEKKGINMSRIMRSFYAHAEQGFSFEVIERALEDYKRDLESFDARIQMRFSFPVKVPSLRSGLVGWQYYDIALELVDRGGVRKKIMHLDFVYSSTCPCSLELSEHARRERGQLATPHSQRSVARISVEVRPGKCLWFEDLIELARAAVPTETQVMVKREDEQAFAELNAANPIFVEDAARSFCQALQADPRIGDFRVVASHQESLHSHDAVSVLTEGPTFAAESLDPRLFASLYHTG

Annotated regions:
Protein sequence:
MSSAFDFEPQPRRASVAVDVGGVIVGGGAPVVVQSMTNTDTADIDATVAQVAALHKAGSELVRITVDRDESAAAVPKIRERLLRLGIDVPLVGDFHYIGHKLLADHPACAEALAKYRINPGNVGFKDKKDKQFAEIIEMAIRYDKPVRIGVNWGSLDQELLTRLMDANQANGSPLTAQQVMRETIVQSALLSAELAEELGLPRSRIILSAKVSGVQDLIAVYAMLAARSVHALHLGLTEAGMGTKGIVASSASLGILMQQGIGDTIRISLTPEPGGDRTREVQVAQELLQVMGFRQFIPVVAACPGCGRTTSTVFQELAQKIQEDIRASMPVWREKYPGVEALKVAVMGCIVNGPGESKHADIGISLPGTGEMPAAPVFIDGQKALTLRGPKIAEDFQLLVADYIEKRFGHGQAAAE

Annotated regions: