nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MVLVVDYGSQYSRLITRRIRENEVYSEVVFPDDKVDLSKVDTVILSGGPRSVYEEDAPKLPEWFQEYKGPVLAICYGMQLIVKELGGEVRRGRGEYGRTLVELSRDPIFEGIPEKVHVWMSHGDEVVRLPEGFHPIAVSETGVIAAATDGKRFWLLQFHPEVHHTEYGDRMISNFLFNVCKLEKNWKIGDLVEEKIRHIKETIGNKKAILALSGGVDSSVAAVLVHRAIGKNLVCVFVDHGLLRKNEREEVERVFKEHFDMNLVVVDARKRFLEKLRGVTDPEKKRKIIGEEFIRVFEEEAKKHDVEFLVQGTIYSDVIESAASGKTTAKIKSHHNVGGLPEKMNLKLVEPLRDLFKDEVRKVGKYLGIPDRIINRHPFPGPGLAVRVLGEVTEEKLEILREADYIFIETLRKHDYYDKVWQAFAVLLPIKSVGVKGDARAYEYVVALRAVNSVEGMTADWSRIPHDILDEAARRITREVKGVGRVVYDITSKPPATIEWE

Annotated regions:
phrase: LVVDYGSQYSRLITRRIRENEVYSEVVFPDDKVDLSKVDTVILSGGPRSVYEEDAPKLPEWFQEYKGPVLAICYGMQLIVKELGGEVRRGRGEYGRTLVELSRDPIFEGIPEKVHVWMSHGDEVVRLPEGFHPIAVSETGVIAAATDGKRFWLLQFHPEVHHTEYGDRMISNFLF
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: WKIGDLVEEKIRHIKETIGNKKAILALSGGVDSSVAAVLVHRAIGKNLVCVFVDHGLLRKNEREEVERVFKEHFDMNLVVVDARKRFLEKLRGVTDPEKKRKIIGEEFIRVFEEEAKKHDVEFLVQGTIYSDVIESAASGKTTAKIKSHHNVGGLPEKMNLKLVEPLRDLFKDEVRKVGKYLGIPDRIIN
type: DOMAIN
name: GMPS_ATP_PPase_dom
description: GMP synthetase ATP pyrophosphatase domain

phrase: VLVVDYGSQYSRLITRRIRENEVYSEVVFPDDKVDLSKVDTVILSGGPRSVYEEDAPKLPEWFQEYKGPVLAICYGMQLIVKELGGEVRRGRGEYGRTLVELSRDPIFEGIPEKVHVWMSHGDEVVRLPEGFHPIAVSETGVIAAATDGKRFWLLQFHPEVHHTEYGDRMISNF
type: DOMAIN
name: GMP_synth_GATase
description: GMP synthase, glutamine amidotransferase

phrase: KAILALSGGVDSSVAAVLVHRAIGKNLVCVFVDHGLLRKNEREEVERVFKEHFDMNLVVVDARKRFLE
type: DOMAIN
name: Arginosuc_syn_N
description: Arginosuccinate synthase-like, N-terminal domain

phrase: VLVVDYGSQYSRLITRRIRENEVYSEVVFPDDKVDLSKVDTVILSGGPRSVYEEDAPKLPEWFQEYKGPVLAICYGMQLIVKELGGEVRRGRGEYGRTLVELSRDPIFEGIPEKVHVWMSHGDEVVRLPEGFHPIAVSETGVIAAATDGKRFWLLQFHPEVHHTEYGDRMISNFLFNVCK
type: DOMAIN
name: GMP_synth_GATase
description: GMP synthase, glutamine amidotransferase

phrase: IKETIGNKKAILALSGGVDSSVAAVLVHRAIGKNLVCVFVDHGLLRKNEREEVERVFKEHFDMNLVVVDARKRFLEKLRGVTDPEKKRKIIGEEFIRVFEEEAKKHDVEFLVQGTIYSDVIESAASGKTTAKIKSHHNVGGLPEKMNLKLVEPLRDLFKDEVRKVGKYLGIPDRIINRHPFPGPGLAVRVLGEVTEEKLEILREADYIFIETLRKHDYYDKVWQAFAVLLPIKSVGVKGDARAYEYVVALRAVNSVEGMTADWSRIPHDILDEAARRITREVKGVGRVVYDITSKPPATIEW
type: DOMAIN
name: GMP_synth_C
description: GMP synthase, C-terminal

phrase: ETLRKHDYYDKVWQAFAVLLPIKSVGVKGDARAYEYVVALRAVNSVEGMTADWSRIPHDILDEAARRITREVKGVGRVVYDITSKPPATIE
type: DOMAIN
name: GMP_synth_C
description: GMP synthase, C-terminal

phrase: LVEEKIRHIKETIGNKKAILALSGGVDSSVAAVLVHRAIGKNLVCVFVDHGLLRKNEREEVERVFKEHFDMNLVVVDARKRFLEKLRGVTDPEKKRKIIGEEFIRVFEEEAKKHDVEFLVQGTIYSDVIESAASGKTTAKIKSHHNVGGLPEKMNLKLVEPLRDLFKDEVRKVGKYLGIPDRIINRHPFPGPGLAVRVLGEVTEEKLEILREADYIFIETLRKHDYYDKVWQAFAVLLPIKSVGVKGDARAYEYVVALRAVNSVEGMTADWSRIPHDILDEAARRITREVKGVGRVVYDITSKPPATIEW
type: DOMAIN
name: GMP_synth_C
description: GMP synthase, C-terminal
Protein sequence:
MKINGQSVSRETQERLEHFVELFKKWNKTTNLVAPSTLTELWSRHVADSAQIFQLSPQPKKWIDLGSGGGFPGVITAIFLAELGDGWVDLVESNNKKAAFLRIALKETGARGAVHPVRIETASEIITTCNAVSARALADLDLLFGYIHPWAQNNPNLKAYFNKGRDYDSEVQKAHGRWQFDLIKHRSAIEADSVVLEISNLVLRR

Annotated regions:
Protein sequence:
MQISAALLCVLLTAAAFTVHVWAQPDGTNSSTCCYVKKQKIPKRNLKSYRKITSSRCPWEAVIFKTKKGMEVCAEAHQKWVEEAIAYLDMKTSTPKP

Annotated regions:
phrase: STCCYVKKQKIPKRNLKSYRKITSSRCPWEAVIFKTKKGMEVCAEAHQKWVEEAIAY
type: DOMAIN
name: Chemokine_IL8-like_dom
description: Chemokine interleukin-8-like domain

phrase: SSTCCYVKKQKIPKRNLKSYRKITSSRCPWEAVIFKTKKGMEVCAEAHQKWVEEAIAY
type: DOMAIN
name: Chemokine_IL8-like_dom
description: Chemokine interleukin-8-like domain

phrase: CCYVKKQKIPKRNLKSYRKITSSRCPWEAVIFKTKKGMEVC
type: CONSERVED_SITE
name: Chemokine_CC_CS
description: CC chemokine, conserved site
Protein sequence:
MERTFAIIKPDAVERNVTGKVLAMIEEGGFKIVGMKKIRLSKCQAEGFYYVHKERPFFGDLCAFMSRGPVIALVLEKENAIADWRALMGATNPANAEAGTIRKALGVSIEENTVHGSDSPESASYEIPYFFNQLELV

Annotated regions:
phrase: MERTFAIIKPDAVERNVTGKVLAMIEEGGFKIVGMKKIRLSKCQAEGFYYVHKERPFFGDLCAFMSRGPVIALVLEKENAIADWRALMGATNPANAEAGTIRKALGVSIEENTVHGSDSPESASYEIPYFFNQLEL
type: DOMAIN
name: NDK-like_dom
description: Nucleoside diphosphate kinase-like domain

phrase: NTVHGSDS
type: ACTIVE_SITE
name: Nucleoside_diP_kinase_AS
description: Nucleoside diphosphate kinase, active site

phrase: ERTFAIIKPDAVERNVTGKVLAMIEEGGFKIVGMKKIRLSKCQAEGFYYVHKERPFFGDLCAFMSRGPVIALVLEKENAIADWRALMGATNPANAEAGTIRKALGVSIEENTVHGSDSPESASYEIPYFFNQL
type: DOMAIN
name: NDK-like_dom
description: Nucleoside diphosphate kinase-like domain
Protein sequence:
MTKITVFGMGSFGTALANVLAENGHDVLMWGKNQDAVDELNTCHTNKKYLKYAKLDVNIIATSDMTKAIQFADIYLMALPTKAMREVATQINDKLTSKKTFIHVAKGIENGTFKRVSEMIEDSISPEYNAGIGVLSGPSHAEEVVVKQPTTVAASSKDKSVSKLTQDLFMNDYLRVYTNDDLIGVELGGALKNIIAVASGIVAGIGYGDNAKAALMTRGLAEISRLGEKLGADPMTFLGLGGIGDLIVTCISTHSRNFTLGYKLGQGESMDQALSEMNMVVEGIYTTKSVYHLAKEKNVDMPITNALYRVLFENISVKECVKDLMERDKKSE

Annotated regions:
phrase: KITVFGMGSFGTALANVLAENGHDVLMWGKNQDAVDELNTCHTNKKYLKYAKLDVNIIATSDMTKAIQFADIYLMALPTKAMREVATQINDKLTSKKTFIHVAKGIENGTFKRVSEMIEDSISPEYNAGIGVLSGPSHAEEVVVKQPTTVAASSKDK
type: DOMAIN
name: G3P_DH_NAD-dep_N
description: Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal

phrase: DLIGVELGGALKNIIAVASGIVAGIGYGDNAKAALMTRGLAEISRLGEKLGADPMTFLGLGGIGDLIVTCISTHSRNFTLGYKLGQGESMDQALSEMNMVVEGIYTTKSVYHLAKEKNVDMPITNALYRVLFENISVKEC
type: DOMAIN
name: G3P_DH_NAD-dep_C
description: Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal
Protein sequence:
MKEITQRQKELLKYIVEDYVATANPVGSKVVIEKYMPNISAATVRNDMAFLEKLGLLEKNHTSSGRVPSTAGYKFYEKNFSKPYINDENLKLKLRNVFADRTMSIDVVIEESCKIISESTKLPMIKIENNTEVLLKRIDMVEINKQSAMVIVITSDGNLTKNIIHFKDDSILKDISICIRIFNDRLIDCPIKEIATKIDSMKSIIKEKVKEYEFVLQELIERIFQIKSKMIKTVHGQSSLLAVPEFQDTEKLKEILQILESTSIWEQIAFKQNQTGSNTLITFGDEVSHEDIVFAQTDLNINEQNKTKLVMVAPTRVDYSKIKGLLEFIKNEFEKGWK

Annotated regions:
phrase: VVIEESCKIISESTKLPMIKIENNTEVLLKRIDMVEINKQSAMVIVITSDGNLTKNIIHFKDDSILKDISICIRIFNDRLIDCPIKEIATKIDSMKSIIKEKVKEYEFVLQELIERIFQIKSKMIKTVHGQSSLLAVPEFQDTEKLKEILQILESTSIWEQIAFKQNQTGSNTLITFGDEVSHEDIVFAQTDLNINEQNKTKLVMVAPTRVDYSK
type: DOMAIN
name: HrcA_C
description: Heat-inducible transcription repressor HrcA, C-terminal
Protein sequence:
MLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIIPYGIDESGKIDYDDMAKQAQEHKPKMIIGGFSAYSGIVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILAKGGSEELYKKLNSAVFPSAQGGPLMHVIAAKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNRGYKVVSGGTENHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDNINDDAVIERVKGKVLDICARFPVYA

Annotated regions:
phrase: HVVTTTTHKTLAGPRG
type: BINDING_SITE
name: Ser_HO-MeTrfase_PLP_BS
description: Serine hydroxymethyltransferase, pyridoxal phosphate binding site

phrase: ADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIIPYGIDESGKIDYDDMAKQAQEHKPKMIIGGFSAYSGIVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLILAKGGSEELYKKLNSAVFPSAQGGPLMHVIAAKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNRGYKVVSGGTENHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTSGIRIGSPAVTRRGFKEAEVKELAGW
type: DOMAIN
name: SHMT-like_dom
description: Serine hydroxymethyltransferase-like domain
Protein sequence:
MAGPQRRGSGAGGGERRDRKGRDGGASAAEKTAYVERVVAINRVAKVVKGGRRFSFTALVVVGDGDGTVGVGYGKAKEVPAAIAKGVEEAKKNFFKVPRIQGTIPHPITGEKAAGVVLLKPASPGTGVIAGGPVRAVLECAGVHDILSKSLGSSNAINIVHATVAALQGLQRPEEIAARRGLPLEDVAPAALLRARAGAGA

Annotated regions:
phrase: ERVVAINRVAKVVKGGRRFSFTALVVVGDGDGTVGVGYGKAKEVPAAIAKGVEEAKKNFFKV
type: DOMAIN
name: Ribosomal_uS5_N
description: Small ribosomal subunit protein uS5, N-terminal

phrase: GRRFSFTALVVVGDGDGTVGVGYGKAKEVPAA
type: CONSERVED_SITE
name: Ribosomal_uS5_N_CS
description: Small ribosomal subunit protein uS5, N-terminal, conserved site

phrase: YVERVVAINRVAKVVKGGRRFSFTALVVVGDGDGTVGVGYGKAKEVPAAIAKGVEEAKKNFFK
type: DOMAIN
name: Ribosomal_uS5_N
description: Small ribosomal subunit protein uS5, N-terminal

phrase: AAGVVLLKPASPGTGVIAGGPVRAVLECAGVHDILSKSLGSSNAINIVHATVAALQGLQRPEEIAAR
type: DOMAIN
name: Ribosomal_uS5_C
description: Small ribosomal subunit protein uS5, C-terminal
Protein sequence:
MTLHNNNTTSPLFPNISSSWIHGPSDTGLPPGTVTHFGSYNISRAAGNLSSPNGTTSDPLGGHTIWQVVFIAFLTGVLALVTIIGNILVIVAFKVNKQLKTVNNYFLLSLACADLIIGVISMNLFTTYIIMNRWALGNLACDLWLSIDYVASNASVMNLLVISFDRYFSITRPLTYRAKRTTKRAGVMIGLAWVISFILWAPAILFWQYFVGKRTVPPGECFIQFLSEPTITFGTAIAAFYMPVTIMTILYWRIYKETEKRTKELAGLQASGTEAEAENFVHPTGSSRSCSSYELQQQSMKRSARRKYGRCHFWFTTKSWKPSAEQMDQDHSSSDSWNNNDAAASLENSASSDEEDIGSETRAIYSIVLKLPGHSTILNSTKLPSSDNLQVPEEELGSVGLERKPSKLQTQQSMDDGGSFQKSFSKLPIQLESAVDTAKASDVNSSVGKTTATLPLSFKEATLAKRFALKTRSQITKRKRMSLIKEKKAAQTLSAILLAFIITWTPYNIMVLVNTFCDSCIPKTYWNLGYWLCYINSTVNPVCYALCNKTFRNTFKMLLLCQCDKRKRRKQQYQQRQSVIFHKRVPEQAL

Annotated regions:
phrase: GNILVIVAFKVNKQLKTVNNYFLLSLACADLIIGVISMNLFTTYIIMNRWALGNLACDLWLSIDYVASNASVMNLLVISFDRYFSITRPLTYRAKRTTKRAGVMIGLAWVISFILWAPAILFWQYFVGKRTVPPGECFIQFLSEPTITFGTAIAAFYMPVTIMTILYWRIYKETEKRTKELAGLQASGTEAEAENFVHPTGSSRSCSSYELQQQSMKRSARRKYGRCHFWFTTKSWKPSAEQMDQDHSSSDSWNNNDAAASLENSASSDEEDIGSETRAIYSIVLKLPGHSTILNSTKLPSSDNLQVPEEELGSVGLERKPSKLQTQQSMDDGGSFQKSFSKLPIQLESAVDTAKASDVNSSVGKTTATLPLSFKEATLAKRFALKTRSQITKRKRMSLIKEKKAAQTLSAILLAFIITWTPYNIMVLVNTFCDSCIPKTYWNLGYWLCYINSTVNPVC
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM
Protein sequence:
KLQLKTLLLQRAKRELEREEQERAGEKQRHLGGLCPPPELEGLGVAQLQELCRELHARIAVDEERYDMGTRVSKNMAEMEELRRRVAGGRFVRPALRRVRLSADAMMAALLGSKHRVGTDLRAGLRQVRKDDAEKESREVGDWRKNVDALSGMEGRKKKFEAPGGGQG

Annotated regions:
Protein sequence:
MSRVKRGVTARARHKKVLNQAKGYYGARSRVYRVAKQAVIKAGQYAYRDRKVKKRTFRSLWIVRINAAARQHDISYSQLINGLNKAGIELDRKALAELAVYNKDAFAAVVEKAKAALA

Annotated regions:
phrase: KRTFRSLWIVRINAAA
type: CONSERVED_SITE
name: RIBOSOMAL_L20_CS
description: Large ribosomal subunit protein bL20, conserved site
Protein sequence:
MSKAKDKAIVSAAQASTAYSQIDSFSHLYDRGGNLTINGKPSYTVDQAATQLLRDGAAYRDFDGNGKIDLTYTFLTSASSSTMNKHGISGFSQFNAQQKAQAALAMQSWSDVANVTFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTSWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGEGAPTYNDATYGQDTRGYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLYGANYNTRAGDTTYGFNSNTGRDFLSATSNADKLVFSVWDGGGNDTLDFSGFTQNQKINLNEASFSDVGGLVGNVSIAKGVTIENAFGGAGNDLIIGNNAANVIKGGAGNDLIYGAGGADQLWGGAGNDTFVFGASSDSKPGAADKIFDFTSGSDKIDLSGITKGAGLTFVNAFTGHAGDAVLTYAAGTNLGTLAVDFSGHGVADFLVTTVGQAAVSDIVA

Annotated regions:
phrase: SWSDVANVTFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTSWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGEGAPTYNDATYGQDTRGYSLMSYWSESNTNQNFSKGGVEAYASGPLIDDIAAIQKLY
type: DOMAIN
name: Serralysin-like
description: Serralysin-like metallopeptidase domain

phrase: GNGKIDLTYTFLTSASSSTMNKHGISGFSQFNAQQKAQAALAMQSWSDVANVTFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTSWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGDYNAGEGAPTYNDATYGQDTRGYSLMSYWSESNTNQNFS
type: DOMAIN
name: Peptidase_Metallo
description: Peptidase, metallopeptidase

phrase: DLIYGAGGADQLWGGAGN
type: CONSERVED_SITE
name: Hemolysin-typ_Ca-bd_CS
description: Hemolysin-type calcium-binding conserved site

phrase: ANYNTRAGDTTYGFNSNTGRDFLSATSNADKLVFSVWDGGGNDTLDFSGFTQNQKINLNEASFSDVGGLVGNVSIAKGVTIENAFGGAGNDLIIGNNAANVIKGGAGNDLIYGAGGADQLWGGAGNDTFVFGASSDSKPGAADKIFDFTSGSDKIDLSGITKGAGLTFVNAFTGHAGDAVLTYAAGTNLGTLAVDFSGHGVADFLVTTVGQAAVSDI
type: DOMAIN
name: Peptidase_M10B_C
description: Peptidase M10 serralysin, C-terminal

phrase: IGNNAANVIKGGAGNDLIYGAGGADQLWGGAGND
type: REPEAT
name: Hemolysn_Ca-bd
description: RTX calcium-binding nonapeptide repeat

phrase: AQQKAQAALAMQSWSDVANVTFTEKASGGDGHMTFGNYSSGQDGAAAFAYLPGTGAGYDGTSWYLTNNSYTPNKTPDLNNYGRQTLTHEIGHTLGLAHPGD
type: DOMAIN
name: Pept_M10_metallopeptidase
description: Peptidase M10, metallopeptidase
Protein sequence:
MSWQQRVDDALTARRATDTLRRRYVVSQGAGRWLVANGRQYLNFSSNDYLGLSQHPQIIRAWQQAATRFGVGSGGSGHISGYSVAHQALEEELAQWLGYPRALLFISGFAANQAVITALMKKNDRIVADRLSHASLLEAANLSPAQLRRFIHNDTQHLSRLLQSPSVGQQLVVTEGVYSMDGDSAPLAEIQHIARRHHAWLLVDDAHGIGVTGDEGRGTCWLRGVKPELLVVTFGKGFGVSGAAVLCSESVADYLLQFARHLVYSTSMPPAQAQALSASLAVIRSDEGGERREKLAALVQRFRAGVNASRFTLLNAHSAIQPLIVGDNSRALRLAEALRQQGCWATAIRPPTVPVGTARLRLTLTQAHEACDIDRLLEVLHGAGE

Annotated regions:
phrase: TFGKGFGVS
type: BINDING_SITE
name: Aminotrans_II_pyridoxalP_BS
description: Aminotransferase, class-II, pyridoxal-phosphate binding site

phrase: QYLNFSSNDYLGLSQHPQIIRAWQQAATRFGVGSGGSGHISGYSVAHQALEEELAQWLGYPRALLFISGFAANQAVITALMKKNDRIVADRLSHASLLEAANLSPAQLRRFIHNDTQHLSRLLQSPSVGQQLVVTEGVYSMDGDSAPLAEIQHIARRHHAWLLVDDAHGIGVTGDEGRGTCWLRGVKPELLVVTFGKGFGVSGAAVLCSESVADYLLQFARHLVYSTSMPPAQAQALSASLAVIRSDEGGERREKLAALVQRFRAGVNASRFTLLNAHSAIQPLIVGDNSRALRLAEALRQQGCWATAIRPPTVPVGTARLRLTLTQAHEACDIDRLLEV
type: DOMAIN
name: Aminotransferase_I/II_large
description: Aminotransferase, class I/classII, large domain
Protein sequence:
MYEYFKGIISKITAKYIVLEVNSIGYILHVANPYAYSGHLHQEAKVYVHQVVREDAELLYGFATEEEKQLFLSLISVSGIGPVSALAIIAADDNAGLVQAIEQKNITYLTKFPKIGKKTAQQMVLDLEGKVVAADGLAESKAPVQTVDNQELEEAMEAMLALGYKATELKKIKKFFEGTTDTAENYIKSALKMLVK

Annotated regions:
phrase: TYLTKFPKIGKKTAQQMVL
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: LSLISVSGIGPVSALAIIA
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: QELEEAMEAMLALGYKATELKKIKKFFEGTTDTAENYIKSAL
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal

phrase: LEEAMEAMLALGYKATELKKIKKFFEGTTDTAENYIKSALKM
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal

phrase: MYEYFKGIISKITAKYIVLEVNSIGYILHVANPYAYSGHLHQEAKVYVHQVVREDAELLY
type: DOMAIN
name: DNA_helicase_Holl-junc_RuvA_I
description: DNA helicase, Holliday junction RuvA type, domain I, bacterial
Protein sequence:
MKITIYFFLLLLSFTINSVSATVQKFNFFDLNKQLNIFLKKEYPLNEDSIKIIIHTPLKKNIYCRKPDFSILSNTHNLGLINILLTCSKQHYYLTVEVQSEGEYIVANRKIPRGTRIKESDLKILIGRLDVLPNNTYRKKKDVVNRISLREFFPLQPITSFMTRPFWLVKVNQQVTVIINGNNFKMSSKAKSLSNGAQNQNIRVKTNSGKIINGIINENGEVIVSP

Annotated regions:
phrase: GEYIVANRKIPRGTRIKESDLKILIGRLDVLPNNTYRKKKDVVNRISLREFFPLQPITSFMT
type: DOMAIN
name: SAF
description: SAF domain

phrase: HYYLTVEVQSEGEYIVANRKIPRGTRIKESDLKILIGRLDVLPNNTYRKKKDVVNRISLREFFPLQPITSFMTRPFWLVKVNQQVTVIINGNNFKMSSKAKSLSNGAQNQNIRVKTNSGKIINGIINENGEVI
type: DOMAIN
name: Flag_basal_body_FlgA_C
description: Flagella basal body P-ring formation protein FlgA, C-terminal

phrase: EYIVANRKIPRGTRIKESDLKILIGRLDVLPNNTYRKKKDVVNRISLREFFPLQPITSFMTRPFWLVKVNQQVTVIINGNNFKMSSKAKSLSNGAQNQNIRVKTNSGKIINGIINENGEVI
type: DOMAIN
name: Flag_basal_body_FlgA_C
description: Flagella basal body P-ring formation protein FlgA, C-terminal
Protein sequence:
MENLPNHEENDDVGYHQSPGPIDPNDHSASETPVYSTMSTDSFAYHRTCSETSGGGFSDQIDETSSFCTEASPSDWPVLTESNNSASSNFPTVFDLKHNQIETDEHLAVQEISEPELETMKERFSKLLLGEDMSGSGKGVCTAVTISNAITNLYATVFGQNLRLEPLEIEQKTTWKREMNCLLSVCDYIFEFIPKSQNLSNGATVEVMESRPRADIYINLPALRKLDSMLMEALDSFQKTEFWYAEEGSLSMKSTRSATGSFRKVIVQRKEEKWWLPIPLVPLQGLSEKARKQLKSKRESTNQIHKAAMAINSSILGEMDIPDSYMATLPKSGKASTGDAIYRHMTSSGRFSPEKLLDRLKIVSEHEALQLADRVEASMYTWRRKACLNNSKSSWNMVKDLMSITERSDKNYVLAERAESLLFCLKQRYPELSQTSLDICKIHCNKDVGKAVLESYSRVLEGLAFNIVAWIDDVLYVDKTMRGEE

Annotated regions:
phrase: LAVQEISEPELETMKERFSKLLLGEDMSGSGKGVCTAVTISNAITNLYATVFGQNLRLEPLEIEQKTTWKREMNCLLSVCDYIFEFIPKSQNLSNGATVEVMESRPRADIYINLPALRKLDSMLMEALDSFQKTEFWYAEEGSLSMKSTRSATGSFRKVIVQRKEEKWWLPIPLVPLQGLSEKARKQLKSKRESTNQIHKAAMAINSSILGEMDIPDSYMATLPKSGKASTGDAIYRHMTSSGRFSPEKLLDRLKIVSEHEALQLADRVEASMYTWRRKACLNNSKSSWNMVKDLMSITERSDKNYVLAERAESLLFCLKQRYPELSQTSLDICKIHCNKDVGKAVLESYSRVLEGLAFNIVAWIDDVLYVDKTMRGE
type: DOMAIN
name: PRONE_dom
description: PRONE domain

phrase: ELETMKERFSKLLLGEDMSGSGKGVCTAVTISNAITNLYATVFGQNLRLEPLEIEQKTTWKREMNCLLSVCDYIFEFIPKSQNLSNGATVEVMESRPRADIYINLPALRKLDSMLMEALDSFQKTEFWYAEEGSLSMKSTRSATGSFRKVIVQRKEEKWWLPIPLVPLQGLSEKARKQLKSKRESTNQIHKAAMAINSSILGEMDIPDSYMATLPKSGKASTGDAIYRHMTSSGRFSPEKLLDRLKIVSEHEALQLADRVEASMYTWRRKACLNNSKSSWNMVKDLMSITERSDKNYVLAERAESLLFCLKQRYPELSQTSLDICKIHCNKDVGKAVLESYSRVLEGLAFNIVAWIDDVLYVDKTM
type: DOMAIN
name: PRONE_dom
description: PRONE domain
Protein sequence:
MGEQQQQVERQPDLPPGFRFHPTDEEIITFYLAPKVVDSRGFCVAAIGEVDLNKCEPWDLPGKAKMNGEKEWYFYCQKDRKYPTGMRTNRATEAGYWKATGKDKEIFRNHHMLIGMKKTLVFYKGRAPKGDKTNWVMHEYRLADASPPPPPSSAEPPRQDDWAVCRIFHKSSGIKKPVPVAPHQVPAAANYQQQQQMAMASAGIIQVPMQMQMPSMSDQLQMLDDFSTTASLSLMAPPSYSTLPAGFPLQINSGAHPQQFVGNPSMYYHQQQQMDMAGGGFVVSEPSSLVVSPQDAADQNNNAADISSMACTMDAAIWKY

Annotated regions:
phrase: PPGFRFHPTDEEIITFYLAPKVVDSRGFCVAAIGEVDLNKCEPWDLPGKAKMNGEKEWYFYCQKDRKYPTGMRTNRATEAGYWKATGKDKEIFRNHHMLIGMKKTLVFYKGRAPKGDKTNWVMHEYR
type: DOMAIN
name: NAC-dom
description: NAC domain

phrase: LPPGFRFHPTDEEIITFYLAPKVVDSRGFCVAAIGEVDLNKCEPWDLPGKAKMNGEKEWYFYCQKDRKYPTGMRTNRATEAGYWKATGKDKEIFRNHHMLIGMKKTLVFYKGRAPKGDKTNWVMHEYRLADASPPPPPSSAEPPRQDDWAVCRIFH
type: DOMAIN
name: NAC-dom
description: NAC domain
Protein sequence:
MPDRVRIFDTTLRDGEQTPGVSLTVEEKVEIARKLDEFGVDTIEAGFPVASEGEFEAVRAIAGEELDAEICGLARCVKGDIDAAIDADVDCVHVFIATSDIHLRYKLEMSREEALERAIEGVEYASDHGVTVEFSAEDATRTDRDYLLEVYKATVEAGADRVNVPDTVGVMTPPEMYRLTAEVVDAVDVPVSVHCHNDFGMAVANSLAAVEAGAEQVHVTVNGIGERAGNASLEQVVMALKALYDIELDVRTEMLVELSRLVERLTGVVVPPNTPIVGENAFAHESGIHSHGVIKKAETYEPIRPEDVGHRRRIVLGKHAGRHAIKKKLEEMGIEVTEEQLDEIVRRVKELGDKGKRVTEDDLEAIARDVVGEVPESEAAVKLEEIAVMTGNKFTPTASVRVYLDGEEHEAASTGVGSVDAAIRALREAIEELGMDVELKEYRLEAITGGTDALAEVTVRLEDEDGNVTTARGAAEDIVMASVKAFVRGVNRLARRRRD

Annotated regions:
phrase: VRIFDTTLRDGEQTPGVSLTVEEKVEIARKLDEFGVDTIEAGFPVASEGEFEAVRAIAGEELDAEICGLARCVKGDIDAAIDADVDCVHVFIATSDIHLRYKLEMSREEALERAIEGVEYASDHGVTVEFSAEDATRTDRDYLLEVYKATVEAGADRVNVPDTVGVMTPPEMYRLTAEVVDAVDVPVSVHCHNDFGMAVANSLAAVEAGAEQVHVTVNGIGERAGNASLEQVVMALKALYDIELDVRTEMLVELSRLVERLTGVVVPPNTPIVGENAFAHESGIHSHGVIKKAETYEPIRPEDVGHRRRIVLGKHAGRHAIKKKLEEMGIEVTEEQLDEIVRRVKELGDKGKRVTEDDLEA
type: DOMAIN
name: LEU1_arch
description: Isopropylmalate/citramalate/homocitrate synthase

phrase: RVTEDDLEAIARDVVGEVPESEAAVKLEEIAVMTGNKFTPTASVRVYLDGEEHEAASTGVGSVDAAIRALREAIEELGMDVELKEYRLEAITGGTDALAEVTVRLEDEDGNVTTARGAAEDIVMASVKAFVRGVNR
type: DOMAIN
name: 2-isopropylmalate_synth_dimer
description: 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain

phrase: IVGENAFAHESGIHSHGVIKKAETYEPIRPEDVGHRRRIVLGKHAGRHAIKKKLEEMGIEVTEEQLDEIVRRVKELGDKG
type: DOMAIN
name: LeuA/HCS_post-cat
description: 2-isopropylmalate synthase/homocitrate synthase, post-catalytic domain

phrase: VRIFDTTLRDGEQTPGVSLTVEEKVEIARKLDEFGVDTIEAGFPVASEGEFEAVRAIAGEELDAEICGLARCVKGDIDAAIDADVDCVHVFIATSDIHLRYKLEMSREEALERAIEGVEYASDHGVTVEFSAEDATRTDRDYLLEVYKATVEAGADRVNVPDTVGVMTPPEMYRLTAEVVDAVDVPVSVHCHNDFGMAVANSLAAVEAGAEQVHVTVNGIGERAGNASLEQVVMALKALYDIELDVRTEML
type: DOMAIN
name: PYR_CT
description: Pyruvate carboxyltransferase

phrase: RVTEDDLEAIARDVVGEVPESEAAVKLEEIAVMTGNKFTPTASVRVYLDGEEHEAASTGVGSVDAAIRALREAIEELGMDVELKEYRLEAITGGTDALAEVTVRLEDEDGNVTTARGAAEDIVMASVKAFVRGVNRL
type: DOMAIN
name: 2-isopropylmalate_synth_dimer
description: 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain

phrase: RVRIFDTTLRDGEQTPGVSLTVEEKVEIARKLDEFGVDTIEAGFPVASEGEFEAVRAIAGEELDAEICGLARCVKGDIDAAIDADVDCVHVFIATSDIHLRYKLEMSREEALERAIEGVEYASDHGVTVEFSAEDATRTDRDYLLEVYKATVEAGADRVNVPDTVGVMTPPEMYRLTAEVVDAVDVPVSVHCHNDFGMAVANSLAAVEAGAEQVHVTVNGIGERAGNASLEQVVMALKALYDIELDVRTEMLVELSRL
type: DOMAIN
name: PYR_CT
description: Pyruvate carboxyltransferase

phrase: LRDGEQTPGVSLTVEE
type: CONSERVED_SITE
name: AIPM/Hcit_synth_CS
description: Alpha-isopropylmalate/homocitrate synthase, conserved site

phrase: VSVHCHNDFGMAV
type: CONSERVED_SITE
name: AIPM/Hcit_synth_CS
description: Alpha-isopropylmalate/homocitrate synthase, conserved site
Protein sequence:
MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGVLPQLEQPYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLGVLVPHVGEIPVAYRKVLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGGAYTRYVDNNFCGPDGYPLECIKDLLARAGKASCTLSEQLDFIDTKRGVYCCREHEHEIAWYTERSEKSYELQTPFEIKLAKKFDIFNGECPNFVFPLNSIIKTIQPRVEKKKLDGFMGRIRSVYPVASPNECNQMCLSTLMKCDHCGETSWQTGDFVKATCEFCGTENLTKEGATTCGYLPQNAVVKIYCPACHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCHNKCAYWVPRASANIGCNHTGVVGEGSEGLNDNLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARVVRSIFSRTLETAQNSVRVLQKAAITILDGISQYSLRLIDAMMFTXXXXXXNLXXXXXXXXXXXXXXXXXXXXXXXTVYEKLKPVLDWLEEKFKEGVEFLRDGWEIVKFISTCACEIVGGQIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX

Annotated regions:
phrase: TRYVDNNFCGPDGYPLECIKDLLARAGKASCTLSEQLDFIDTKRGVYCCREHEHEIAWYTERSEKSYELQTPFEIKLAKKFDIFNGECPNFVFPLNSIIKTIQPRVEKKKLDGFMGRIRSVYPVASPNECNQMCLSTLMKCDHCGETSWQTGDFVKATCEFCGTENLTKEGATTCGYLPQNAVVKIYCPACHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCHNKCAYWVPRASANIGCNHTGVVGEGSEGLNDNLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAA
type: DOMAIN
name: NSP2_N_CoV
description: Nonstructural protein 2, N-terminal domain, coronavirus

phrase: CGYLPQNAVVKIYCPACHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCHNKCAYWVPRASANIGCNHTGVVGEGSEGLNDNLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAARVVRSIFSRTLETAQNSVRVLQKAAITILDGISQYSLRLIDAMMFTXXXXXXNLXXXXXXXXXXXXXXXXXXXXXXXTVYEKLKPVLDWLEEKFKEGVEFLRDGWEIVKFISTCACEIVGGQIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
type: DOMAIN
name: CoV_NSP2_M
description: Non-structural protein 2, middle domain, coronavirus

phrase: TRYVDNNFCGPDGYPLECIKDLLARAGKASCTLSEQLDFIDTKRGVYCCREHEHEIAWYTERSEKSYELQTPFEIKLAKKFDIFNGECPNFVFPLNSIIKTIQPRVEKKKLDGFMGRIRSVYPVASPNECNQMCLSTLMKCDHCGETSWQTGDFVKATCEFCGTENLTKEGATTCGYLPQNAVV
type: DOMAIN
name: NSP2_N_CoV
description: Nonstructural protein 2, N-terminal domain, coronavirus

phrase: THVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGVLPQLEQPYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLGVLVPHVGEIPVAYRKVLLRKN
type: DOMAIN
name: a/bCoV_NSP1_glob
description: NSP1, globular domain, alpha/betacoronavirus

phrase: ELGTDPYEDFQENWNTKHSSGVTRELMRELN
type: DOMAIN
name: bCoV_NSP1_C
description: NSP1, C-terminal domain, betacoronavirus
Protein sequence:
METLSQRITSMESVQLQGIAVAFVTASALYYVLPAAISHIQLSALPMLGKTEVVVIPPKLLSELSKSPRTLSAEIAGNEFIAGKYTKVKALTPILLHSITKYLIPSLGRNAVVMSEEVSNAVRLGIPTCNDWTGVNIYPKIMRMVTVSTGRFLVGSELNRSEDYIDTVHNYALDVSSAQSAVHKMHPWIRPLLAEWLPEIRRLRKRTEEAFALFESLIKERMKMQRELSESELPDDLLQWMIANRHNYNNEDAHDLVYSQLGLTFTANHSTASTITNALYTLATMGDLIDVIRDDITQALAESGGQFTSKALDSMWKFDSFIKETVRMNPLVMSVAVRKVVEPIKLPSGQVIPTGVTLETPLVAVNLDDQIFPNADVFDPMRFYNLREKDRKQGDAREAEFNQLISSSTSHMSWGFGKHTCPGRAFAAQQIKMILAHIILRYDIKLVGDSTDRYENIPKGHLSLPDPTKDILMKRREI

Annotated regions:
phrase: WGFGKHTCP
type: CONSERVED_SITE
name: Cyt_P450_CS
description: Cytochrome P450, conserved site