nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MMTMNGKQHFSMHPALHPSSEGMRRVCLPAPQLQGNIFSGFDESLLARAEALAAADIVSHGKSHPFKTDVTYHTMSSVPCTSSSSTVPISHPSSNLPSHHHHHLSHQTLEGDLLDHISSSLSVSGMGAPPDPSVMTTQAHQHHLQMGHLHQAMAMGHPHTLSVHNGMACVNDVESDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEAEAAYREKNGKPDLFNGNERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYSAVH

Annotated regions:
phrase: RKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRMKYS
type: DOMAIN
name: HD
description: Homeodomain

phrase: DVESDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEA
type: DOMAIN
name: POU_dom
description: POU-specific domain

phrase: NERKRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKR
type: DOMAIN
name: HD
description: Homeodomain

phrase: SQSTICRFESLTL
type: DOMAIN
name: POU_dom
description: POU-specific domain

phrase: KRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQKRM
type: DOMAIN
name: HD
description: Homeodomain

phrase: RIKLGVTQADVGSALAN
type: DOMAIN
name: POU
description: POU domain

phrase: SQSTICRFESLTL
type: DOMAIN
name: POU
description: POU domain

phrase: NMIALKPVLQAWLEE
type: DOMAIN
name: POU
description: POU domain

phrase: ERKRKRTSIAAPEKRSLEAY
type: DOMAIN
name: POU
description: POU domain

phrase: AEKLDLKKNVVRVWF
type: DOMAIN
name: POU
description: POU domain

phrase: DVESDPRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEA
type: DOMAIN
name: POU_dom
description: POU-specific domain

phrase: RRIKLGVTQADV
type: DOMAIN
name: POU_dom
description: POU-specific domain

phrase: IAEKLDLKKNVVRVWFCNQRQKQ
type: CONSERVED_SITE
name: Homeobox_CS
description: Homeobox, conserved site

phrase: KRKRTSIAAPEKRSLEAYFAIQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQK
type: DOMAIN
name: HD
description: Homeodomain

phrase: PRELEAFAERFKQRRIKLGVTQADVGSALANLKIPGVGSLSQSTICRFESLTLSHNNMIALKPVLQAWLEEA
type: DOMAIN
name: POU_dom
description: POU-specific domain
Protein sequence:
MLHRIPAFLRPRPFSGLPLSCGNRDVSVAVLPAAQSGAVRTENNIQRHFCTSRSICSKKVDQSVPANEISQKAAESQGRGKETLKKDLLDIIKDMKVDLSTANVKTPKPRGRKPSASLEATVDRLQKAPEDPPKKRNEFLSPELVAAASAVADSLPFDKQTTKSELLRQLQQHEEELRAQKDREKRRISFTHIISNMKIAKSPSGRASTRPQHQIQFDEDMDSSLKQEKPTDFRKRKYLFKGKRLSIFADKAFADEPPEPEASPSLWEIEFAKQLASVADQPFENGFEEMIQWTKEGKLWEFPVNNEAGLDDDGSEFHEHIFLDKYLEDFPKQGPIRLFMELVTCGLSKNPYLSVKQKVEHIEWFRNYFNEKRDILKENNIAFT

Annotated regions:
Protein sequence:
MAKRRKGNREKEKETTWQERVIQIRRVSKVVKGGKKLSFRAIVVVGNENGQVGVGVGKAGDVIGAVRKGVADGKKQLIEVSLTKASSITHLTRGASGGAQVIMRPAAPGTGVIAGGAVRTVLELAGVKNILAKQLGSDNPLNNARAAVNALETLRTFSEVAKDRGVSIEHLYT

Annotated regions:
phrase: WQERVIQIRRVSKVVKGGKKLSFRAIVVVGNENGQVGVGVGKAGDVIGAVRKGVADGKKQLIE
type: DOMAIN
name: Ribosomal_uS5_N
description: Small ribosomal subunit protein uS5, N-terminal

phrase: ASGGAQVIMRPAAPGTGVIAGGAVRTVLELAGVKNILAKQLGSDNPLNNARAAVNALETLRTFSEVAKD
type: DOMAIN
name: Ribosomal_uS5_C
description: Small ribosomal subunit protein uS5, C-terminal

phrase: GKKLSFRAIVVVGNENGQVGVGVGKAGDVIGA
type: CONSERVED_SITE
name: Ribosomal_uS5_N_CS
description: Small ribosomal subunit protein uS5, N-terminal, conserved site

phrase: WQERVIQIRRVSKVVKGGKKLSFRAIVVVGNENGQVGVGVGKAGDVIGAVRKGVADGKKQLIE
type: DOMAIN
name: Ribosomal_uS5_N
description: Small ribosomal subunit protein uS5, N-terminal
Protein sequence:
MKNQHVAVYVTGGIAAYKAAFFVREMIKKGAQVKVALTKSACAFVTPLTFQTLSQNPVYIDGENSAEIVPHIELAVWSDLAVVIPATANLIAKMATGIADDFVSSALLASACPKFVVPAMNDQMYYNPATQRNLKQLMEDGICVLEPATGFLAEGYTGKGRLPEIEQVVEWLTFNYTRISQKQDLKNKQVLITAGGTIEPLDPVRYLTNRSSGKMGYALAENALLRGATVILISAPTQLKPPFGAKVIAVQTALEMAKAVETYYSKMDIVIMAAAVSDYRAAKPAAQKIKKRDTTLALQLVENPDILLGLGAKKKQQLLVGFAAETQQLVQNAAKKMVKKRVDLLVANDVSRSDIGFGSNQNEVTFLRPHQKPLLVKKTTKEEIAAQIFDVLLSQ

Annotated regions:
phrase: HVAVYVTGGIAAYKAAFFVREMIKKGAQVKVALTKSACAFVTPLTFQTLSQNPVYIDGENSAEIVPHIELAVWSDLAVVIPATANLIAKMATGIADDFVSSALLASACPKFVVPAMNDQMYYNPATQRNLKQLMEDGICVLEPATGFLAEGYTGKGRLPEIEQVVE
type: DOMAIN
name: Flavoprotein
description: Flavoprotein

phrase: LKNKQVLITAGGTIEPLDPVRYLTNRSSGKMGYALAENALLRGATVILISAPTQLKPPFGAKVIAVQTALEMAKAVETYYSKMDIVIMAAAVSDYRAAKPAAQKIKKRDTTLALQLVENPDILLGLGAKKKQQLLVGFAAETQQLVQNAAKKMVKKRVDLLVANDVSRSDIGFGSNQNEVT
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal
Protein sequence:
MFVRKPATERPRLPSVGRLGLFDPHAPAHLDQLGWNTDDHVELLWSLSRAPDADAALLAMVRLADELKDDWDELNRLLLTDRPLRGRLFAVLGSSLALGDHLVAHPQSWRLLHGDVRLPSARELRETFDDAARSVDIERGASAAIPPLRDLYRDRLLVLAALDVASTVENEPVLPFVTVSAHLSDLADAALSAALIVATRTVCGDLDPRLAVIAMGKCGARELNYVSDVDVIFVGEDIEKDGRSDNLATATRVAGEMMRFAGDAFFEVDAALRPEGKRGQLVRTLDSHVAYYRRWAKTWEFQALLKARPAAGDPELGQAYIDALMPMVWTACEREDFVPEVQAMRRRVEELVPADVRSREIKLGTGGLRDVEFAVQLLQLVHGRTDESLHVASTVDALAALGEGGYVGRDDAANMTASYEFLRLLEHRLQLQRLKRTHMLPDDNDDEAYRWLARAAHIRPDGTHDAQGVLREELKRQSLRVSRLHAKLFYQPLLESVGHTALGIGEGMSAEAAERQLAALGYERPQSALAHLAALTGATGRKGRIQQILLPTLLDWLSDTPDPDAGLLAYRRLSDEHSDLRWFLGTLRDEGAVAKRLMRVLGTSAYIPELLMRAPEVIQMYADGPSGPKLLEDDRESRARALVASASRYADPVRAIAAARTLRRRELARIASADVLGMLDVIDVCKSLTAVWVAVLQAALDVVIRANTPDSGVPARIAVIGMGRLGGGELGYGSDADVMFVCEPNSGVEESVAVRWSVGVAEQVRALLGTPSADPPLEVDTGLRPEGRSGPLVRTLASYDAYYSQWAQPWEIQALLRAHRVAGDLELGERFLLMADKIRYPEGGVSASAVQEIRRIKARVDAERLPRGADPNTHTKLGRGGLADIEWTVQLLQLRYAHKVPALHNTSTLEALNAIGAAELVAEGDVELLREAWLTATRARNALVLVRGKPTDQLPGPGRQLNAVALAAGWGSDDGGEFLDNYLRVTRRAKAVVRKIFGG

Annotated regions:
phrase: KARVDAERLPRGADPNTHTKLGRGGLADIEWTVQLLQLRYAHKVPALHNTSTLEALNAIGAAELVAEGDVELLREAWLTATRARNALVLVRGKPTDQLPGPGRQLNAVALAAGWGSDDGGEFLDNYLRVTRRAKAVVRKI
type: DOMAIN
name: PII_UdlTrfase/GS_AdlTrfase
description: PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase

phrase: AMRRRVEELVPADVRSREIKLGTGGLRDVEFAVQLLQLVHGRTDESLHVASTVDALAALGEGGYVGRDDAANMTASYEFLRLLEHRLQLQRLKRTHMLPDDNDDEAYRWLARAAHIRPDGTHDAQGVLREELKRQSLRVSRLHAKL
type: DOMAIN
name: PII_UdlTrfase/GS_AdlTrfase
description: PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase

phrase: RLFAVLGSSLALGDHLVAHPQSWRLLHGDVRLPSARELRETFDDAARSVDIERGASAAIPPLRDLYRDRLLVLAALDVASTVENEPVLPFVTVSAHLSDLADAALSAALIVATRTVCGDLDPRLAVIAMGKCGARELNYVSDVDVIFVGEDIEKDGRSDNLATATRVAGEMMRFAGDAFFEVDAALRPEGKRGQLVRTLDSHVAYYRRWAKTWEFQALLKARPAAGDPELGQ
type: DOMAIN
name: GlnE_rpt_dom
description: Glutamate-ammonia ligase adenylyltransferase, repeated domain

phrase: KRLMRVLGTSAYIPELLMRAPEVIQMYADGPSGPKLLEDDRESRARALVASASRYADPVRAIAAARTLRRRELARIASADVLGMLDVIDVCKSLTAVWVAVLQAALDVVIRANTPDSGVPARIAVIGMGRLGGGELGYGSDADVMFVCEPNSGVEESVAVRWSVGVAEQVRALLGTPSADPPLEVDTGLRPEGRSGPLVRTLASYDAYYSQWAQPWEIQALLRAHRVAGDLELGERF
type: DOMAIN
name: GlnE_rpt_dom
description: Glutamate-ammonia ligase adenylyltransferase, repeated domain
Protein sequence:
MPFGTLYTRPFNPRSLAILAIAKANNLPLKIKTITSFKDATEEYLQLNPLGKIPTFVGADGYVLTESIAIALYDSNTTLLGTTGQEYASIIRWMAFGITEILPALGGWFNPLIGRANFNADNIYQSKDDTLARLKILDNHLCGREYLVGETLSLADLFVLGIVQGAFRFFLDKRWRDEHRNLSTWFERVHALPIVVDVAGPPVLAEYEMPIQPPK

Annotated regions:
phrase: NFNADNIYQSKDDTLARLKILDNHLCGREYLVGETLSLADLFVLGIVQGAFRFFLDKRWRDEHRNLSTWFERVHAL
type: DOMAIN
name: GST_C
description: Glutathione S-transferase, C-terminal

phrase: GTLYTRPFNPRSLAILAIAKANNLPLKIKTITSFKDATEEYLQLNPLGKIPTFVGADGYVLTESIAIAL
type: DOMAIN
name: Glutathione_S-Trfase_N
description: Glutathione S-transferase, N-terminal

phrase: TGQEYASIIRWMAFGITEILPALGGWFNPLIGRANFNADNIYQSKDDTLARLKILDNHLCGREYLVGETLSLADLFVLGIVQGAFRFFLDKRWRDEHRNLSTWFERVHALPIVVDVAGPPVLAEYEMP
type: DOMAIN
name: Glutathione-S-Trfase_C-like
description: Glutathione S-transferase, C-terminal-like

phrase: PFGTLYTRPFNPRSLAILAIAKANNLPLKIKTITSFKDATEEYLQLNPLGKIPTFVGADGYVLTESIAIALYDSNTTLLG
type: DOMAIN
name: Glutathione_S-Trfase_N
description: Glutathione S-transferase, N-terminal
Protein sequence:
MGLSPVNIFKPFGLGRAKAVIAAVSGGSDSLGLLFLLKDYLSTLESPPVLIAVTVDHKLRAESALEAENVGLLCQKHGIMHCVLSWDDPKPAHGLAAAARTARYRLLVQAARDAGAGFIVTGHTENDQIETFLMRKARSGHCEARGLAAMSPRSLLEGSVELARPLLTVSRQALRDELTRRGIAWVDDPSNANIDYERPRVRLGVAAEADGQEVLEQIAQAGAARERDNAALVEALADPATLGVDAAGMMFLNADCYAALSPGARQLFSGLLASIAGGRRFLPGDGERRRIERMLSGQDAPRRLTVFGALIERGEKGAPHRFRRERRNLPKLDLVPGQHIVWDGRFCFFNSGGRSFEIAPPGRQELIDFLKNSGRDIESRRCEALLISPALYEGGKLAFVPFLPGAEWPQGVHIERHFAIFDHVLPGHDFALAQAVEARLGRACAEIS

Annotated regions:
phrase: VIAAVSGGSDSLGLLFLLKDYLSTLESPPVLIAVTVDHKLRAESALEAENVGLLCQKHGIMHCVLSWDDPKPAHGLAAAARTARYRLLVQAARDAGAGFIVTGHTENDQIETFLMRKARSGHCEARGLAAMSPRSLLEGSVELARPLLTVSRQALRDELTRRGIAWVDDPSNANIDYERPRVR
type: DOMAIN
name: tRNA_Ile_lys_synt_N
description: tRNA(Ile)-lysidine synthase, N-terminal

phrase: VIAAVSGGSDSLGLLFLLKDYLSTLESPPVLIAVTVDHKLRAESALEAENVGLLCQKHGIMHCVLSWDDPKPAHGLAAAARTARYRLLVQAARDAGAGFIVTGHTENDQIETFLMRKARSGHCEARGLAAMSPRSLLEGSVELARPLLTVSRQALRDELTRRGIAWVDDPSNANIDYERPRV
type: DOMAIN
name: TilS/TtcA_N
description: tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal

phrase: VIAAVSGGSDSLGLLFLLKDYLSTLESPPVLIAVTVDHKLRAESALEAENVGLLCQKHGIMHCVLSWDDPKPAHGLAAAARTARYRLLVQAARDAGAGFIVTGHTENDQIETFLMRKARSGHCEARGLAAMSPRSLLEGSVELARPLLTVSRQALRDELTRRGIAWVDDPSNANIDYERPRVRLGV
type: DOMAIN
name: tRNA_Ile_lys_synt_N
description: tRNA(Ile)-lysidine synthase, N-terminal
Protein sequence:
MNEMKFLQHLKEKGFELTDEQQKQFAIYYETLVEWNEKINLTAVTEKEEVYLKHFFDSITPSFYFDFNKVKSICDVGAGAGFPSIPLKILYPHLEITIVDSLNKRINFLNHLSAELNLTNCHFVHDRAETFGKGEYRESFDVVTARAVARLSVLSELCLPLVKKGGHFIALKGAQGEIEVEEGLFAISILGGAVVENHPLTLPEEESMRYILDIEKKRQTPKKYPRKPGTPNKEPLLK

Annotated regions:
Protein sequence:
MSFKMTQNQYTSLYGPTVGDSIRLGDTNLFAQIEKDYAVYGEEATFGGGKSIRDGMAQNPRVTRDDVNVADLVISNAVIIDYDKVVKADIGIKNGYIFAIGNAGNPDIMDNVDIIIGSTTDIIAAEGKIVTAGGIDTHVHFINPEQAEVALESGITTHIGGGTGASEGSKATTVTPGPWHIHRMLEAAEGLPINVGFTGKGQATNPTALIEQINAGAIGLKVHEDWGATPSALSHALDVADEFDVQIALHADTLNEAGFMEDTMAAVKDRVLHMYHTEGAGGGHAPDLIKSAAFSNILPSSTNPTLPYTHNTVDEHLDMVMITHHLNAAIPEDIAFADSRIRKETIAAEDVLQDMGVFSMISSDSQAMGRVGEVITRTWQVAHRMKEQRGPLDGDFEHNDNNRIKRYIAKYTINPAITHGISEYVGSIEPGKLADIVLWDPIFFGVKPELVVKGGLINSAVNGDANGSIPTSEPMKYRKMYGQYGGNLTSTSMTFVSKTAYENGINRALNLKRMVRPVKNIRQLSKADMKNNSATPKLDVDPQTYEVYVDGEKITSNAATELPLTQRYFLF

Annotated regions:
phrase: IVTAGGIDTHVHFINPEQAEVALESGITTHIGGGTGASEGSKATTVTPGPWHIHRMLEAAEGLPINVGFTGKGQATNPTALIEQINAGAIGLKVHEDWGATPSALSHALDVADEFDVQIALHADTLNEAGFMEDTMAAVKDRVLHMYHTEGAGGGHAPDLIKSAAFSNILPSSTNPTLPYTHNTVDEHLDMVMITHHLNAAIPEDIAFADSRIRKETIAAEDVLQDMGVFSMISSDSQAMGRVGEVITRTWQVAHRMKEQRGPLDGDFEHNDNNRIKRYIAKYTINPAITHGISEYVGSIEPGKLADIVLWDPIFFGVKPELVVKGGLI
type: DOMAIN
name: Amidohydro-rel
description: Amidohydrolase-related

phrase: MITHHLNAAIPEDIAF
type: ACTIVE_SITE
name: Urease_AS
description: Urease active site

phrase: KMTQNQYTSLYGPTVGDSIRLGDTNLFAQIEKDYAVYGEEATFGGGKSIRDGMAQNPRVTRDDVNVADLVISNAVIIDYDKVVKADIGIKNGYIFAIGNAGNPDIMDNVDIIIGSTTDI
type: DOMAIN
name: Urease_alpha_N_dom
description: Urease alpha-subunit, N-terminal domain

phrase: TAGGIDTHVHFIN
type: BINDING_SITE
name: Urease_Ni-bd
description: Urease nickel binding site

phrase: GGIDTHVHFINPEQAEVALESGITTHIGGGTGASEGSKATTVTPGPWHIHRMLEAAEGLPINVGFTGKGQATNPTALIEQINAGAIGLKVHEDWGATPSALSHALDVADEFDVQIALHADTLNEAGFMEDTMAAVKDRVLHMYHTEGAGGGHAPDLIKSAAFSNILPSSTNPTLPYTHNTVDEHLDMVMITHHLNAAIPEDIAFADSRIRKETIAAEDVLQDMGVFSMISSDSQAMGRVGEVITRTWQVAHRMKEQRGPLDGDFEHNDNNRIKRYIAKYTINPAITHGISEYVGSIEPGKLADIVLWDPIFFGVKPELVVKGGLINSAVNGDANGSIPTSEPMKYRKMYGQYGGNLTSTSMTFVSKTAYENGINRALNLKRMVRPVKNIRQLSKADMKNNSATPKLDVDPQTYEVYVDGEKITSNAATELPLTQRYFL
type: DOMAIN
name: Urease_asu_c
description: Urease alpha subunit, C-terminal
Protein sequence:
MFNKSVNSGFTFGNQNTSTPTSTPAQPSSSLQFPQKSTGLFGNVNVNANTSTPSPSGGLFNANSNANSISQQPANNSLFGNKPAQPSGGLFGATNNTTSKSAGSLFGNNNATANSTGSTGLFSGSNNIASSTQNGGLFGNSNNNNITSTTQNGGLFGKPTTTPAGAGGLFGNSSSTNSTTGLFGSNNTQSSTGIFGQKPGASTTGGLFGNNGASFPRSGETTGTMSTNPYGINISNVPMAVADMPRSITSSLSDVNGKSDAEPKPIENRRTYSFSSSVSGNAPLPLASQSSLVSRLSTRLKATQKSTSPNEIFSPSYSKPWLNGAGSAPLVDDFFSSKMTSLAPNENSIFPQNGFNFLSSQRADLTELRKLKIDSNRSAAKKLKLLSGTPAITKKHMQDEQDSSENEPIANADSVTNIDRKENRDNNLDNTYLNGKEQSNNLNKQDGENTLQHEKSSSFGYWCSPSPEQLERLSLKQLAAVSNFVIGRRGYGCITFQHDVDLTAFTKSFREELFGKIVIFRSSKTVEVYPDEATKPMIGHGLNVPAIITLENVYPVDKKTKKPMKDTTKFAEFQVFDRKLRSMREMNYISYNPFGGTWTFKVNHFSIWGLVNEEDAEIDEDDLSKQEDGGEQPLRKVRTLAQSKPSDKEVILKTDGTFGTLSGKDDSIVEEKAYEPDLSDADFEGIEASPKLDVSKDWVEQLILAGSSLRSVFATSKEFDGPCQNEIDLLFSECNDEIDNAKLIMKERRFTASYTFAKFSTGSMLLTK

Annotated regions:
phrase: SFGYWCSPSPEQLERLSLKQLAAVSNFVIGRRGYGCITFQHDVDLTAFTKSFREELFGKIVIFRSSKTVEVYPDEATKPMIGHGLNVPAIITLENVYPVDKKTKKPMKDTTKFAEFQVFDRKLRSMREMNYISYNPFGGTWTFKVNH
type: DOMAIN
name: Nup98_auto-Pept-S59_dom
description: Nuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain

phrase: QQPANNSLFGNKPAQPSGGLFGATNNTTSKSAGSLFGNNNATANSTGSTGLFSGSNNIASSTQNGGLFGNSNNNNITSTTQNGGLF
type: REPEAT
name: Nucleoporin_FG_rpt
description: Nucleoporin FG repeat
Protein sequence:
MKQYLDLMKHILAEGVDKSDRTGTGTRSVFGYQMRFDLSKGFPLVSTKKCHMRSIIHELLWFLKGETNVAYLRENKVSIWDEWADDNGDLGPVYGAQWRSWPTQSGDAIDQISQVIAQIKSQPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTALQLSREPMPLPTMTILRKPESIFDYQFDDFELTNYAPHPHIKAPVAV

Annotated regions:
phrase: QYLDLMKHILAEGVDKSDRTGTGTRSVFGYQMRFDLSKGFPLVSTKKCHMRSIIHELLWFLKGETNVAYLRENKVSIWDEWADDNGDLGPVYGAQWRSWPTQSGDAIDQISQVIAQIKSQPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYALLTMMVAQQCDLALGDFVWTGGDTHLYSNHME
type: DOMAIN
name: Thymidate_synth/dCMP_Mease_dom
description: Thymidylate synthase/dCMP hydroxymethylase domain

phrase: KQYLDLMKHILAEGVDKSDRTGTGTRSVFGYQMRFDLSKGFPLVSTKKCHMRSIIHELLWFLKGETNVAYLRENKVSIWDEWADDNGDLGPVYGAQWRSWPTQSGDAIDQISQVIAQIKSQPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTALQLSREPMPLPTMTILRKPESIFDYQFDDFELTNYAPHPHIKAPVA
type: DOMAIN
name: Thymidate_synth/dCMP_Mease_dom
description: Thymidylate synthase/dCMP hydroxymethylase domain

phrase: RRLIVSAWNVGELDKMALAPCHAFFQFY
type: ACTIVE_SITE
name: Thymidylate_synthase_AS
description: Thymidylate synthase, active site
Protein sequence:
MPGARDQGAARARWLGIGLLGLFLLPVSLSLEVSVGKATTIYAVNGTEILLPCTFSSCFGFENLHFWWSYNSSDTYKILIDGTVKNEKSDPKVKLKDDDRITLEGSTKEKMNNISISLKNLEFSDTGKYTCHVKNPKENDFQHQATIFLQVVDKLEEVDNTVTLIILGVVGGVIGLLIFILLVKKFIAFIIKKTQEKKKECLVSSSGNDNTENGLPGSKAEEKAPTKV

Annotated regions:
phrase: PVSLSLEVSVGKATTIYAVNGTEILLPCTFSSCFGFENLHFWWSYNSSDTYKILIDGTVKNEKSDPKVKLKDDDRITLEGSTKEKMNNISISLKNLEFSDTGKYTCHVKNPKENDFQHQATI
type: DOMAIN
name: Ig-like_dom
description: Immunoglobulin-like domain

phrase: ATTIYAVNGTEILLPCTFSSCFGFENLHFWWSYNSSDTYKILIDGTVKNEKSDPKVKLKDDDRITLEGSTKEKMNNISISLKNLEFSDTGKYTCHVKNPKENDFQHQATIFLQV
type: DOMAIN
name: Ig_sub
description: Immunoglobulin domain subtype

phrase: TIYAVNGTEILLPCTFSSCFGFENLHFWWSYNSSDTYKILIDGTVKNEKSDPKVKLKDDDRITLEGSTKEKMNNISISLKNLEFSDTGKYTCHVKNPKENDFQHQA
type: DOMAIN
name: Ig_V-set
description: Immunoglobulin V-set domain
Protein sequence:
MGDIARQAPDKDTGEDIYQYLLERITNLENRNLELREQFRQMESEKRYVETQKIRYERELRKLKSEIEQLRSPPLVIGTVTDVIDNSRVIVRSSAGPRFLVRTSQLIDPDLLKPGVRCTLNQQSLAIVDVLPTSYDAQIYGMELVESPEETYENIGGLEPQIEEIREAVELPLTKPQLFEKVGISPPKGVLLYGPPGTGKTLLARAVAHQTNAHFLRVVGSELVQKYIGEGARLVRELFDLAKQRAPSIIFIDEIDAIGAHRNDSTTSGDREVQRTLMQLLAEMDGFDNRGDVKIVAATNRIDILDRALLRPGRFDRMIEIPLPDHQGRLAILKIHTQYMNIGEDVNLSEVSRLTEGKNGADLRAICMEAGMFAIRMERDAVNSEDFMKAIDKLALDFDRHHFHTTFGEMFA

Annotated regions:
phrase: VKIVAATNRIDILDRALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: PPKGVLLYGPPGTGKTLLARAVAHQTNAHFLRVVGSELVQKYIGEGARLVRELFDLAKQRAPSIIFIDEIDAIGAHRNDSTTSGDREVQRTLMQLLAEMDGFDNRGDVKIVAATNRIDILDRALLRPGRFDRMIEIPLP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: IGTVTDVIDNSRVIVRSSAGPRFLVRTSQLIDPDLLKPGVRCTLNQQSLAIVDVL
type: DOMAIN
name: Prot_ATP_ID_OB_2nd
description: Proteasomal ATPase, second OB domain

phrase: VLLYGPPGTGKTLLARAVAHQTNAHFLRVVGSELVQKYIGEGARLVRELFDLAKQRAPSIIFIDEIDAIGAHRNDSTTSGDREVQRTLMQLLAEMDGFDNRGDVKIVAATNRIDILDRALLRPGRFDRMIEIP
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: DVNLSEVSRLTEGKNGADLRAICMEAGMFAIRMERDAVNSEDFM
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain
Protein sequence:
MKVMAIVLAAGQGKRMKSKLYKVLHPVSGRPMVGHVLDTVKEASSERTVVVVGHGAEMVKSYLGDAAEYVLQEQQLGTGHAVLQAAPLLGTEEGTTIVICGDTPLVQSSTLHAMLKLHADSGAAATILSASFENPAGYGRIIRGEDGTVQRIVEHKDCSAEEAAVQEINTGTYCFDNRKLFDALGRVTNENTQGEYYLTDVIGLLKEAGEIVQGYCTDDTAEAIGVNDRVALAEAERYMRERINRKHLLNGVTIIDPANTYIEVSVQIGSDTIVYPGTVLRGATIIGEDCVIGPAAEVVDTVMHNGASIKYSTAAESVIGEESAVGPYANLRPGSQLGRACKVGDFVELKNASLDDGSKVSHLSYIGDAVVGKDVNIGCGAITVNYDGFNKAVTEIGDGAFIGSNVNLIAPVKVGNGSYVVAGTTITHDVPDGDLAIARERQVNKPGYADKIRARAKAKKERTE

Annotated regions:
phrase: AIVLAAGQGKRMKSKLYKVLHPVSGRPMVGHVLDTVKEASSERTVVVVGHGAEMVKSYLGDAAEYVLQEQQLGTGHAVLQAAPLLGTEEGTTIVICGDTPLVQSSTLHAMLKLHADSGAAATILSASFENPAGYGRIIRGEDGTVQRIVEHKDCSAEEAAVQEINTGTYCFDNRKLFDALGRVTNENTQGEYYLTDVIGLLKEAGEIVQG
type: DOMAIN
name: NTP_transferase_dom
description: Nucleotidyl transferase domain

phrase: TEIGDGAFIGSNVNLIAPVKVGNGSYVVAGTTIT
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: GVTIIDPANTYIEVSVQIGSDTIVYPGTVLRGATIIGEDCVIGPAAEVVDTVMHNGASIKYSTAAESVIGEESAVGPYANLRPGSQLGRACKVGDFVELKNASLDDGSKVSHLSYIGDAVVGKDVNIGCGAITVNYDGFNKAVTEIGDGAFIGSNVNLIAPVKVGNGSYVVAGTTITHDVPDGDLAIARER
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain
Protein sequence:
MVKQTDQGQGASPTKQPLKKLAEVRDLNFYYGGNKALKNINLPVYEKQVTALIGPSGCGKTTLLRCFNRMHDLYPGNRYEGEIWLGDENPRNLLQMDPIEVRMQIGMVFQKPNPFPKSIYENVAYGLRIRGITNRAVLDEVVERSLRNAALWDEVKDRLKDPGTSLSGGQQQRLCIARALATNPELILFDEPTSALDPIATVSIENLITELKDQVTILIVTHSMQQAIRISQFTAFMYLGELVEYNDTMSIFTKPVQQKTADYVNGRFG

Annotated regions:
phrase: LSGGQQQRLCIARA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: EKQVTALIGPSGCGKTTLLRCFNRMHDLYPGNRYEGEIWLGDENPRNLLQMDPIEVRMQIGMVFQKPNPFPKSIYENVAYGLRIRGITNRAVLDEVVERSLRNAALWDEVKDRLKDPGTSLSGGQQQRLCIARALATNPELILFDEPTSALDPIATVSIENLITELKDQVTILIVTHSMQQAIRISQFTAFMYLG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: AEVRDLNFYYGGNKALKNINLPVYEKQVTALIGPSGCGKTTLLRCFNRMHDLYPGNRYEGEIWLGDENPRNLLQMDPIEVRMQIGMVFQKPNPFPKSIYENVAYGLRIRGITNRAVLDEVVERSLRNAALWDEVKDRLKDPGTSLSGGQQQRLCIARALATNPELILFDEPTSALDPIATVSIENLITELKDQVTILIVTHSMQQAIRISQFTAFMYLGELVEYNDTMSIFTKPVQQKTADY
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: LKNINLPVYEKQVTALIGPSGCGKTTLLRCFNRMHDLYPGNRYEGEIWLGDENPRNLLQMDPIEVRMQIGMVFQKPNPFPKSIYENVAYGLRIRGITNRAVLDEVVERSLRNAALWDEVKDRLKDPGTSLSGGQQQRLCIARALATNPELILFDEPT
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain
Protein sequence:
MENSERIKKWKEERAKVAQESRASRLQQKEDERALRQTEKSADAKSHHNPDAGWSATDADSVRRASLVIKERRVQQAKQSLRRLFLYIALPLLVIMLMSWILTSHFYSADATFIVQTDASQDNFSGTSFFGAGNKMSEGFQVREFILSKEMMDRMEKELGFLSYFAQDDIALFSRFHAPLGINDDPYRYYLSKVSVAVDIQQGMLRLNVKARSAKQAEFFAQRILSFAEQHVNTVSARMQKERILWLENDVKSAQENLGAARLELLKIQHIQKDIDPKETITAIYQLIAGFETQLAEAKAEYAQLMVNGLDQNPLIPRLSAKIKVLEKQIGEQRNRLSNKLGSQGSSESLSLFEDLRLQSEIAKARWESALQTLQQGKLQALRERQYLLIISQPMAESDTTRYADGTKWLLFFVLLGITYLVTSLLITIRRMRE

Annotated regions:
Protein sequence:
MSIKTIKYFSTIIVAVVAVLAGWWLWNYYMQSPWTRDGKIRAEQVSITPQVSGRIVELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFISAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRAPVSGWVTNLTTRIGDYADTGKPLFALVDSHSFYVIGYFEETKLRHIREGAPAQITLYSDNKTLQGHVSSIGRAIYDQSVESDSSLIPDVKPNVPWVRLAQRVPVRFALDKVPGDVTLVSGTTCSIAVGQ

Annotated regions:
phrase: EQVSITPQVSGRIVELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFISAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRAPVSGWVTNLTTRIGDYADTGKPLFALVDSHSFYVIGYFEETKLRHIREGAPAQITLYSDNKTLQGHVSSIGRA
type: DOMAIN
name: CusB_D23
description: RND efflux pump, membrane fusion protein, barrel-sandwich domain

phrase: VAVLAGWWLWNYYMQSPWTRDGKIRAEQVSITPQVSGRIVELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKANNEANRRRHLSQNFISAEELDTANLNVKAMQASVDAAQATLKQAQWQLAQTEIRAPVSGWVTNLTTRIGDYADTGKPLFALVDSHSFYVIGYFEETKLRHIREGAPAQITLYSDNKTLQGHVSSIGRAIYDQSVESDSSLIPDVKPNVPWVRLAQRVPVRFALDKVPGDVTLVSGTTC
type: DOMAIN
name: CusB-like_dom_1
description: Cation efflux system protein CusB-like, domain 1
Protein sequence:
MSHSVKIYDTCIGCTQCVRACPTDVLEMIPWDGCKAKQIASAPRTEDCVGCKRCESACPTDFLSVRVYLWHETTRSMGLGY

Annotated regions:
phrase: IASAPRTEDCVGCKRCESACPTDFLSVRV
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: CIGCTQCVRAC
type: CONSERVED_SITE
name: 4Fe4S_Fe_S_CS
description: 4Fe-4S ferredoxin, iron-sulphur binding, conserved site

phrase: CVGCKRCESAC
type: CONSERVED_SITE
name: 4Fe4S_Fe_S_CS
description: 4Fe-4S ferredoxin, iron-sulphur binding, conserved site

phrase: MSHSVKIYDTCIGCTQCVRACPTDVLEMIP
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain
Protein sequence:
MRTKQVNLLITLVAVALFSFSCFSIYRITQTNNQLINCRNHILEFKENMLHLRNKTEKNTQEMMKVLNRMKYEITKREILSGNLVAQKADILNKNETVSNTFEDLKFFFPHLRKEGRIYPDVIIGKGKTGVSFALGISTVNRGNYSYLKQTLTSVVSRMTLSQEKDSVVIVLVADSNEDYLHSVVKMITKKFKRQVRSGSLEVISIPAFLYSSMLNAKHLAEASQKLASWRIKQVLDFCILLLYAQPKAKYYLQLEDDIIAKEMYFTKITDFVGNISSNNWFFIEFSMLGFIGKLFRSEDLTHFVRFFLMFYKEKPIDWLLNDIFQVKVCDAGEDLRNCMKRKKQIRIQYKPSLFQHVGIHSSFPRKEQYEKKI

Annotated regions:
Protein sequence:
MSDRQAALDMALKQIEKQFGKGSIMKLGEQAERRISTISSGSLALDVALGVGGYPRGRVIEIYGPESSGKTTVSLHAIAEVQRQGGQAAFIDAEHAMDPVYAQKLGVNIDELLLSQPDTGEQGLEIAEALVRSGAVDIIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPETTPGGRALKFYSTVRLEVRRAEQLKQGNDIVGNKTKVKVVKNKVAPPFRVAEVDIMYGEGISREGEILDMASELDIVQKSGAWYSYNEERLGQGRENSKQFLKENTDLREEIAFFVREHHGIGENSGVEDTEDSTRQD

Annotated regions:
phrase: GVMFGNPETTPGGRALKFYSTVRLEVRRAEQLKQGNDIVGNKTKVKVVKNKVAPPFRVAEVDIMYGEGISREG
type: DOMAIN
name: RecA_monomer-monomer_interface
description: DNA recombination and repair protein RecA, monomer-monomer interface

phrase: GEILDMASELDIVQKSGAWYSYNEERLGQGRENSKQFLKENTDLREEIAFFVREH
type: DOMAIN
name: RecA-like_C
description: RecA-like, C-terminal

phrase: ALDMALKQIEKQFGKGSIMKLGEQAERRISTISSGSLALDVALGVGGYPRGRVIEIYGPESSGKTTVSLHAIAEVQRQGGQAAFIDAEHAMDPVYAQKLGVNIDELLLSQPDTGEQGLEIAEALVRSGAVDIIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPETTPGGRALKFYSTVRLEVRRAEQLKQGNDIVGNKTKVKVVKNKVAPPFRVAEVDIMYGEGI
type: DOMAIN
name: RecA-like_N
description: RecA-like, N-terminal

phrase: ALKFYSTV
type: CONSERVED_SITE
name: DNA_recomb/repair_RecA_CS
description: DNA recombination/repair protein RecA, conserved site

phrase: RISTISSGSLALDVALGVGGYPRGRVIEIYGPESSGKTTVSLHAIAEVQRQGGQAAFIDAEHAMDPVYAQKLGVNIDELLLSQPDTGEQGLEIAEALVRSGAVDIIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLSGAINKSKTIAIFINQ
type: DOMAIN
name: RecA_ATP-bd
description: DNA recombination and repair protein RecA-like, ATP-binding domain

phrase: RGRVIEIYGPESSGKTTVSLHAIAEVQRQGGQAAFIDAEHAMDPVYAQKLGVNIDELLLSQPDTGEQGLEIAEALVRSGAVDIIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVGVMFGNPETTPGGRALKFYSTVRLEVRRA
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain
Protein sequence:
MPEVQLRNNWKREEIEALFALPMNDLLFQAHSIHRQEFDPNEVQVSRLLSIKTGACPEDCKYCPQSARYDTGLEKERLLAMETVLTEARSAKAAGASRFCMGAAWRNPKERDMPYLKTMVEEVKALGMETCMTLGMLSAEQANTLADAGLDYYNHNLDTSPEYYGDVITTRTYQSRLDTLTNVRASGMKVCSGGIVGMGEKATDRAGLIQQLANLEQHPDSVPINMLVKVEGTPFEKLDDLDPLEFVRTIAVARITMPKSRVRLSAGRENMSDELQAMCFFAGANSIFYGCKLLTTPNPEENDDMSLFKRLGLHPEQGIAATKEQDEAMLAKAAAHQDKKSAAFYDAGAL

Annotated regions:
phrase: PINMLVKVEGTPFEKLDDLDPLEFVRTIAVARITMPKSRVRLSAGRENMSDELQAMCFFAGANSIFYGCKLLTTPNPEENDDMSLFKRLGLH
type: DOMAIN
name: BATS_dom
description: Biotin and thiamin synthesis-associated domain

phrase: SRLLSIKTGACPEDCKYCPQSARYDTGLEKERLLAMETVLTEARSAKAAGASRFCMGAAWRNPKERDMPYLKTMVEEVKALGMETCMTLGMLSAEQANTLADAGLDYYNHNLDTSPEYYGDVITTRTYQSRLDTLTNVRASGMKVCSGGIVGMGEKATDRAGLIQQLANLEQHPDSVPINMLVKVEGTPFEKLDDLDPLEFVRTIAVARITM
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: PINMLVKVEGTPFEKLDDLDPLEFVRTIAVARITMPKSRVRLSAGRENMSDELQAMCFFAGANSIFYGCKLLTTPNPEENDDMSLFKRLG
type: DOMAIN
name: BATS_dom
description: Biotin and thiamin synthesis-associated domain

phrase: KTGACPEDCKYCPQSARYDTGLEKERLLAMETVLTEARSAKAAGASRFCMGAAWRNPKERDMPYLKTMVEEVKALGMETCMTLGMLSAEQANTLADAGLDYYNHNLDTSPEYYGDVITTRTYQSRLDTLTNVRASGMKVCSGGIVGMGE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: NEVQVSRLLSIKTGACPEDCKYCPQSARYDTGLEKERLLAMETVLTEARSAKAAGASRFCMGAAWRNPKERDMPYLKTMVEEVKALGMETCMTLGMLSAEQANTLADAGLDYYNHNLDTSPEYYGDVITTRTYQSRLDTLTNVRASGMKVCSGGIVGMGEKATDRAGLIQQLANLEQHPDSVPINMLVKVEGTPFEKLDDLDPLEFVRTIAVARITMPKSRVRLSAG
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MNELSKIEQAIEDLRNGKLIIVADDADREAEGDLVGLSEFVTPEKVNFMTKYGRGLICVPITEERALELDLHAMATNNTDTYGTQFTVSVDYYTNSTGISTADRADTIRALAEPLSKAADFKRPGHMFPLIAKNAGVLERRGHTEAAVDLARLSNSIPSAYICEILNDDGTMARYPALETLAKDWDLTLITVEDLVQYREKEIAIEN

Annotated regions: