nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MFHGSMVALVTPMQVDGAIDDVALRELVEWHIAEGTHALVAVGTTGESATLEMREHVAVIQTVVEQARGRVPVIAGTGANATHEAIELTRAAMEVKADAALLVSPYYNKPTQEGLFQHYSAIAEHCHFPIILYNVPGRTAGDILPETVARLAPRADIIGIKEASGKVERVAEILALCGDQVQVYSGDDGAALAAMALGARGVISVTANAAPRLMARMCDLALAGDFVGARAVNAQLTGLHRDLFLESNPIPVKWALHEMGRMESVLRLPLTTLSSVHHERLRESLRRAQCI

Annotated regions:
phrase: ALVAVGTTGESATLEMR
type: CONSERVED_SITE
name: Schiff_base-form_aldolases_CS
description: Schiff base-forming aldolase, conserved site

phrase: YNVPGRTAGDILPETVARLAPRADIIGIKE
type: ACTIVE_SITE
name: Schiff_base-form_aldolases_AS
description: Schiff base-forming aldolase, active site
Protein sequence:
MQSAASGSPRRQESVPHILERLGIPLAELVSDSRKSAPGVVFAAYPGETRDGRDYIVQAVAQRVDGVLWEADHYQWDPALGIPNAGVVDLKSRIGEIAAHVYGEPSRAMHMIGITGTNGKTSVAHWVAQAFARLGQKIAVIGTAGNGFPGALTPALNTTPDAIELQRRLAKYRKQGAVACAMEVSSHGLEQGRVNGTAFNVAVLTNLSRDHLDYHGNMDNYANAKARLFSWPGLDWVVLNVDDPFGQRLEHAVSTARVAGYGFQRGAVVGDTLRMSQSGLHLRVRTDWGNAELEVPLLGRFNAANVLAALATLLVSDVKLEDACQALAHITPPPGRMQTLGGDAHPLVVVDYAHTPDALEKVLATLREIVSGGRLICVFGCGGNRDKGKRPLMGQVAAAGADEAWITSDNPRNEDPQRIISDILAGASGARPDHPLRIEPDRARAIFEAIGGAHRGDVVLIAGKGHEDYQEIADERFPFSDVTVANKALEAWT

Annotated regions:
phrase: GRMQTLGGDAHPLVVVDYAHTPDALEKVLATLREIVSGGRLICVFGCGGNRDKGKRPLMGQVAAAGADEAWITSDNPRNEDPQRIISDILAGASGARPDHPLRIEPDRARAIFEAIGGAHRGDVVLIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: ITGTNGKTSVAHWVAQAFARLGQKIAVIGTAGNGFPGALTPALNTTPDAIELQRRLAKYRKQGAVACAMEVSSHGLEQGRVNGTAFNVAVLTNLSRDHLDYHGNMDNYANAKARLFSWPGLDWVVLNVDDPFGQRLEHAVSTARVAGYGFQRGAVVGDTLRMSQSGLHLRVRTDWGNAELEVPLLGRFNAANVLAALA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central
Protein sequence:
MAVKHAVSPLAPKTTPTLPRIAGVKLAAAQSGVRYKDRDDVMLAVVPAGATIAGVLTRSKCSSAPVDWCRKNLARGKVRAIVVNAGNANAFTGKLGDKAVEESTRAIAQALGCPRNEVFMASTGVIGQPLDWEKIAAVVPAMIKSAREDSWSAAAGAIMTTDTFPKLATRQAKIGERTVTINGFLKGSGMIAPDMATMLAFVFTDAKVPGAVLQKLVADAADKSLNCVTVDGDTSTSDTLLMVATGAARHAPIEEADDPVLVDFKRALDEVLIDLAQLLARDGEGATKFVTINVGGASSNGAARKIGLSVANSPLVKTAIAGEDANWGRIVMAVGKSGERADRDKLKISIGGVKITDGGQVVPNYDETPVAKHIKGTDIVIDIDLGIGRGRATVWTCDLTHGYIDINGSYRS

Annotated regions:
Protein sequence:
MSLKLKTIKSTKWSALSSLTIIVLGFLQMVILSRILEPFEFGVLSIMTVVFLFTDMLADCGLSNAIIQKKNITLDELSALYWVNIFLGVFLFVVTIILSYEISSWMRLDRLSFLIQLTALVFIIMPHGQQYRALMQKELEFDILSKIESFSYLTGFCLTVIIGIITKNASCAVFGYLLTVSMRTVILSFVGRKYYHPTWKRSKLREIKKQLLFSFYLTLDSILNYINSSITTPIVARVLGAIYVGGYNLSFNVAVNPPSKISPIITRVLFPALSKIQDDKERLRINFFKLLHVISYINFPALLGLCIIAKDFVYLVFGEKWLFIVPTLQLLCIAGAMRMVANPIGSLLMAKAKMELSVRFNFVKIIIFIPVLYFSTIWNGMVGAAIGFLICQAINALLSYFFLLKPVLGNCIVDYINSFFIPFVHTLPMILLLLVCDIYIDKISLTFFILKIVIGGGVYILTIFISPNKLLAEMKGLFRQLLLKS

Annotated regions:
Protein sequence:
MQMAGRGANRRGQHRSPVLVRPPDAEWSMRTFGVEEELLIVDPVTGEPLALADALLAGQDEPTSGLSHELKLEQIETQTRPCHSYGELLQQIRRGRAMANQAARQHGARVAAIATSPLASNTHTTPDPRYAAMLDRFGIIATEQLTCGFHVHTSVESPEEGVVVLDHIRDKLAVLTALTANSPYWRGLPTGFDSYRTQAWNRWPTSGPSSVFGSLTAYRRIVKRLLETGVIMDEGMIYFDARISRNHPTVEVRVADVCLRAEDAALMAVLVRALVETASLEMLDGVEPTAVPTALLRMASWQASNSGLRGDLLDFGDFLPQPAADVVWALVDYLSPVLDDQGELELVKAGISDVLDRGNGAHEQRETAVRYNKRQHDGQTQPGSPPTNEALAAVVGHAAKVTVRGAAADAHKDPAPMLTRVRRP

Annotated regions:
Protein sequence:
MDTERHATLLLDLVWPEVDEKAQGFIYAKDFPLVVSRMEEILNRGKLERDRAQLVSETGREILRKFGSDQEFFKVYKEDFRELFDGLVGTSFKSAVKSCAGDGVLDRLQDSQAVDGIQDEKTSSHALQEEVMRLREQVRVLSSKNDEKDREITARDEIIADLQGKDASPAGSPRSLQRMRTLQARVTSLEDELSFRDEVIREKDRELLNLTKRVGEFKDKYQFLEREFQFYKGHREQKSPDSIKEATRHEFIISELRRKITEQSEIIGQMRMQVEAKPGALHPQGIGSTAGLPLNLPLRLVLRLIIGAILAYLAFDIGIRSLKAVGGLFGSSSPATLTPKSELSWWEQNTLLSKLLWFFKDLFDTYNLDAGRDEVVSANYDKLFGV

Annotated regions:
Protein sequence:
MRLARPLENLIDQLLKLPGIGPKTAQRLALYILKLPEMEARQLAQAIVDCRQKVFPCSRCGYLTDFDPCLICSDESRDKSLICIGEESSDVIAIERTGFRGQYFVLNKDFNLMEDKGLEDLNLKPLEDRLATGEIKEVVLALNPDMDGEVMSRFLATVAGSFGVKVTRLAHGLPVGGDIEFADEITLRRALEGRKEL

Annotated regions:
phrase: VFPCSRCGYLTDFDPCLICS
type: DOMAIN
name: Rcmb_RecR_Znf
description: Recombination protein RecR, zinc finger domain

phrase: DQLLKLPGIGPKTAQRLAL
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: SLICIGEESSDVIAIERTGFRGQYFVLNKDFNLMEDKGLEDLNLKPLEDRLATGEIKEVVLALNPDMDGEVMSRFLATVAGSFGVKVTRLAHGL
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: SLICIGEESSDVIAIERTGFRGQYFVLNKDFNLMEDKGLEDLNLKPLEDRLATGEIKEVVLALNPDMDGEVMSRFLATVAGSFGVKVTRLAHGLPVGGDIEFADEITLRR
type: DOMAIN
name: TOPRIM_RecR
description: RecR, TOPRIM domain

phrase: CSRCGYLTDFDPCLICSDESR
type: DOMAIN
name: Rcmb_RecR_Znf
description: Recombination protein RecR, zinc finger domain

phrase: LICIGEESSDVIAIERTGFRGQYFVLNKDFNLMEDKGLEDLNLKPLEDRLATGEIKEVVLALNPDMDGEVMSRFLATVAGSFGVKVTRL
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain
Protein sequence:
MSKTFAEIAETFLEPEAVRIAKEAVEEYGDHERKIIQIGIHFQVCCMFCDEYLSTNGSDRFVLIEGRKRGTAVSLQNELCKSYDLEPLPFLCDIFDREEKQFVEIGITRKADDSYFQSKFGKLGNSCKIFVFSYDGRLDKNCEGPMEEQKLRIFSFLATAADFLRKENMFNEIFLPDNEETIIEMKKGKTFLKLRDESVPLPFQTYEQMKDYCEKFKGNPRELASKVSQMQSNIKLPIKHYEQNKFRQIRLPKGPMAPYTHKFLMEEAWMFTKISDPERSRAGEILIDFFKKGNLSAIRPKDKPLQGKYPIHYKNLWNQIKAAIADRTMVISENDHSEFLGGIGRASKKIPEVSLTQDVITTEGLKQSENKLPEPRSFPKWFNAEWMWAIKDSDLTGWVPMAEYPPADNELEDYAEHLNKTMEGVLQGTNCAREMGKCILTVGALMTECRLFPGKIKVVPIYARSKERKSMQEGLPVPSEMDCLFGICVKSKSHLNKDDGMYTIITFEFSIREPNLEKHQKYTVFEAGHTTVRMKKGESVIGREVPLYLYCRTTALSKIKNDWLSKARRCFITTMDTVETICLRESAKAEENLVEKTLNEKQMWIGKKNGELIAQPLREALRVQLVQQFYFCIYNDSQLEGFCNEQKKILMALEGDKKNKSSFGFNPEGLLEKIEECLINNPMCLFMAQRLNELVIEASKRGAKFFKID

Annotated regions:
Protein sequence:
MKETLARTDFRLPGQKAVYHGKVRDVYTLENDLLVMIATDRISAFDVVLPAGIPYKGQVLNQIAAHYLDATRDIVPNWKIATPDPMVTIGHRCEPFKVEMVIRGYITGSAWRAYAAGERVLCGLPLPEGMRENQRFEHPIITPTTKADEGHDENISRQEIIAQGLVSKEDYEQIERYTYALFERGTQMAAEKGLILVDTKYEFGKKDGKIYLIDEIHTPDSSRYFYAEGYQERFERGEAQKQLSKEFVRQWLIENGFQGKPGQQIPKMTEAYCDSVSERYIELYERVVGKPFEKADLSNLAERIEKNITEYLR

Annotated regions:
phrase: PFKVEMVIRGYITG
type: CONSERVED_SITE
name: SAICAR_synthetase_CS
description: SAICAR synthetase, conserved site

phrase: LVDTKYEF
type: CONSERVED_SITE
name: SAICAR_synthetase_CS
description: SAICAR synthetase, conserved site

phrase: QKAVYHGKVRDVYTLENDLLVMIATDRISAFDVVLPAGIPYKGQVLNQIAAHYLDATRDIVPNWKIATPDPMVTIGHRCEPFKVEMVIRGYITGSAWRAYAAGERVLCGLPLPEGMRENQRFEHPIITPTTKADEGHDENISRQEIIAQGLVSKEDYEQIERYTYALFERGTQMAAEKGLILVDTKYEFGKKDGKIYLIDEIHTPDSSRYFYAEGYQERFERGEAQKQLSKEFVRQWLIENGFQGKPGQQIPKMTEAYCDSVSERYIELYERVV
type: DOMAIN
name: SAICAR_synt/ADE2_N
description: SAICAR synthetase/ADE2, N-terminal

phrase: VYHGKVRDVYTLENDLLVMIATDRISAFDVVLPAGIPYKGQVLNQIAAHYLDATRDIVPNWKIATPDPMVTIGHRCEPFKVEMVIRGYITGSAWRAYAAGERVLCGLPLPEGMRENQRFEHPIITPTTKADEGHDENISRQEIIAQGLVSKEDYEQIERYTYALFERGTQMAAEKGLILVDTKYEFGKKDGKIYLIDEIHTPDSSRYFYAEGYQERFERGEAQKQLSKEFVRQWLIENG
type: DOMAIN
name: SAICAR_synt/ADE2_N
description: SAICAR synthetase/ADE2, N-terminal
Protein sequence:
MRYRLAWLLHPALPSTFRSVLGARLPPPERLCGFQKKTYSKMNNPAIKRIGNHITKSPEDKREYRGLELANGIKVLLISDPTTDKSSAALDVHIGSLSDPPNIAGLSHFCEHMLFLGTKKYPKENEYSQFLSEHAGSSNAFTSGEHTNYYFDVSHEHLEGALDRFAQFFLCPLFDESCKDREVNAVDSEHEKNVMNDAWRLFQLEKATGNPKHPFSKFGTGNKYTLETRPNQEGIDVRQELLKFHSAYYSSNLMAVCVLGRESLDDLTNLVVKLFSEVENKNVPLPEFPEHPFQEEHLKQLYKIVPIKDIRNLYVTFPIPDLQKYYKSNPGHYLGHLIGHEGPGSLLSELKSKGWVNTLVGGQKEGARGFMFFIINVDLTEEGLLHVEDIILHMFQYIQKLRAEGPQEWVFQECKDLNAVAFRFKDKERPRGYTSKIAGILHYYPLEEVLTAEYLLEEFRPDLIEMVLDKLRPENVRVAIVSKSFEGKTDRTEEWYGTQYKQEAIPDEVIKKWQNADLNGKFKLPTKNEFIPTNFEILPLEKEATPYPALIKDTAMSKLWFKQDDKFFLPKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSLNEYAYAAELAGLSYDLQNTIYGMYLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKEAYMRSLNNFRAEQPHQHAMYYLRLLMTEVAWTKDELKEALDDVTLPRLKAFIPQLLSRLHIEALLHGNITKQAALGIMQMVEDTLIEHAHTKPLLPSQLVRYREVQLPDRGWFVYQQRNEVHNNCGIEIYYQTDMQSTSENMFLELFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSEKPPHYLESRVEAFLITMEKSIEDMTEEAFQKHIQALAIRRLDKPKKLSAECAKYWGEIISQQYNFDRDNTEVAYLKTLTKEDIIKFYKEMLAVDAPRRHKVSVHVLAREMDSCPVVGEFPCQNDINLSQAPALPQPEVIQNMTEFKRGLPLFPLVKPHINFMAAKL

Annotated regions:
phrase: LFCQIISEPCFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSEKPPHYLESRVEAFLITMEKSIEDMTEEAFQKHIQALAIRRLDKPKKLSAECAKY
type: DOMAIN
name: PqqF-like_C_4
description: Coenzyme PQQ synthesis protein F-like, C-terminal lobe, domain 4

phrase: FRFKDKERPRGYTSKIAGILHYYPLEEVLTAEYLLEEFRPDLIEMVLDKLRPENVRVAIVSKSFEGKTDRTEEWYGTQYKQEAIPDEVIKKWQNADLNGKFKLPTKNEFIPTNFEILPLEKEATPYPALIKDTAMSKLWFKQDDKFFLPKACLNFEFFSPFAYVDPLHCNMAYLYLELLKDSLNEYAYAAELAGLSYDLQNTIYGMYLSVKGYNDKQPILLKKIIEKMATFEIDEKRFEIIKEAYMRSLNNFRAEQPHQHAMYYLRLLMTEVAWTKDELK
type: DOMAIN
name: Peptidase_M16_M
description: Peptidase M16, middle/third domain

phrase: GSLSDPPNIAGLSHFCEHMLFLG
type: BINDING_SITE
name: Pept_M16_Zn_BS
description: Peptidase M16, zinc-binding site

phrase: RQELLKFHSAYYSSNLMAVCVLGRESLDDLTNLVVKLFSEVENKNVPLPEFPEHPFQEEHLKQLYKIVPIKDIRNLYVTFPIPDLQKYYKSNPGHYLGHLIGHEGPGSLLSELKSKGWVNTLVGGQKEGARGFMFFIINVDLTEEGLLHVEDIILHMFQYIQKLRAEGPQEWVFQECK
type: DOMAIN
name: Peptidase_M16_C
description: Peptidase M16, C-terminal

phrase: KVLLISDPTTDKSSAALDVHIGSLSDPPNIAGLSHFCEHMLFLGTKKYPKENEYSQFLSEHAGSSNAFTSGEHTNYYFDVSHEHLEGALDRFAQFFLCPLFDESCKDREVNAVDSEHEKNVMNDAWRLFQLEKATGNP
type: DOMAIN
name: Pept_M16_N
description: Peptidase M16, N-terminal
Protein sequence:
MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSDMFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGKYCFGVEDTLKALEMGAVEILIVYENLDIMRYVLRCNGSEEEKTLYLTPEQEKDKSHFIDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGMEYQGGDDEFFDLDDY

Annotated regions:
phrase: KKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALT
type: DOMAIN
name: eRF1_1_Pelota
description: eRF1 domain 1/Pelota-like

phrase: KFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSDMFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLS
type: DOMAIN
name: eRF1_2
description: eRF1 domain 2

phrase: FIQEKKLIGRYFDEISQDTGKYCFGVEDTLKALEMGAVEILIVYENLDIMRYVLRCNGSEEEKTLYLTPEQEKDKSHFIDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYR
type: DOMAIN
name: eRF1_3
description: eRF1 domain 3

phrase: PSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSLYLCDNKFHTEALTALL
type: DOMAIN
name: eRF1_1_Pelota
description: eRF1 domain 1/Pelota-like
Protein sequence:
MTTKRRNHGRNKKGRGHVRPIRCTNCGRCAPKDKAIKKFVVRNIVVAAAVRDISDASAYDSYALPKLYHKLHYCVSCAIHSKV

Annotated regions:
phrase: YCVSCAI
type: CONSERVED_SITE
name: Ribosomal_eS26_CS
description: Ribosomal protein eS26, conserved site
Protein sequence:
MLVSQRVTGARARAPQLAGLLEAWYRHGRTTSSYSALSEPSRVRALVYGNHGDPAKVVQLKNLELTAVEGSDVHVRMLAAPINPSDINMIQGNYGLLPKLPAVGGNEGVGQVIAVGSSVSALKPGDWVIPANAGLGTWRTEAVFSEEALIGIPKDIPLQSAATLGVNPCTAYRMLVDFEQLQPGDSVIQNASNSGVGQAVIQIASALRLKTINVVRDRPDIKKLTDRLKDLGADYVLTEEELRMPETKTIFKDLPLPRLALNCVGGKSSTELLRHLAPGGTMVTYGGMAKQPVTASVSLLIFKDLKLRGFWLSQWKKNHSPDEFKELILTLCNLIRQGRLTAPSCSEVPLQGYQQALEASMKPFVSSKQILTM

Annotated regions:
phrase: GVGQAVIQIASALRLKTINVVRDRPDIKKLTDRLKDLGADYVLTEEELRMPETKTIFKDLPLPRLALNCVGGKSSTELLRHLAPGGTMVTYGGMAKQPVTASVSLLIFKDLKLRGFWLSQWKKNHSPDEFKE
type: DOMAIN
name: ADH-like_C
description: Alcohol dehydrogenase-like, C-terminal

phrase: VQLKNLELTAVEGSDVHVRMLAAPINPSDINMIQGNYGLLPKLPAVGGNEGVGQVIAVGSSVSALKPGDWVIPANAGLGTWRTEAVFSEEALIGIPKDIPLQSAATLGVNPCTAYRMLVDFEQLQPGDSVIQNASNSGVGQAVIQIASALRLKTINVVRDRPDIKKLTDRLKDLGADYVLTEEELRMPETKTIFKDLPLPRLALNCVGGKSSTELLRHLAPGGTMVTYGGMAKQPVTASVSLLIFKDLKLRGFWLSQWKKNHSPDEFKELILTLCNLIRQGRLTAPSCSEVPLQGYQQALEASMKPFVSSKQI
type: DOMAIN
name: PKS_ER
description: Polyketide synthase, enoylreductase domain

phrase: DVHVRMLAAPINPSDINMIQGNYGLLPKLPAVGGNEGVGQVIAVGSSVSALKPGDWVIPANAGLGTWRTEAVFSEEALI
type: DOMAIN
name: ADH-like_N
description: Alcohol dehydrogenase-like, N-terminal
Protein sequence:
MPEKTIVVLPGDHVGTEITAEAIKVLKAIEEVKPEIKFNFQHHLIGGAAIDATGVPLPDDALEASKKADAVLLGAVGGPKWGTGAVRPEQGLLKIRKELNLYANLRPCNFASESLLDLSPIKAEVVKGTDFVVVRELVGGIYFGERKEDDGSGVASDTETYSVPEVQRITRMAAFMALQHNPPLPIWSLDKANVLASSRLWRKVVTETIEKEFPQLTVQHQLIDSAAMILIKYPTQLNGIVITSNMFGDIISDEASVIPGSLGLLPSASLASLPDSNKAFGLYEPCHGSAPDLPANKVNPIATILSAAMMLKLSLDLYEEGVAVETAVKQVLDAGIRTGDLKGTNSTTEVGDAVAEAVKKILA

Annotated regions:
phrase: TIVVLPGDHVGTEITAEAIKVLKAIEEVKPEIKFNFQHHLIGGAAIDATGVPLPDDALEASKKADAVLLGAVGGPKWGTGAVRPEQGLLKIRKELNLYANLRPCNFASESLLDLSPIKAEVVKGTDFVVVRELVGGIYFGERKEDDGSGVASDTETYSVPEVQRITRMAAFMALQHNPPLPIWSLDKANVLASSRLWRKVVTETIEKEFPQLTVQHQLIDSAAMILIKYPTQLNGIVITSNMFGDIISDEASVIPGSLGLLPSASLASLPDSNKAFGLYEPCHGSAPDLPANKVNPIATILSAAMMLKLSLDLYEEGVAVETAVKQVLDAGIRTGDLKGTNSTTEVGDA
type: DOMAIN
name: IsoPropMal-DH-like_dom
description: Isopropylmalate dehydrogenase-like domain

phrase: TIVVLPGDHVGTEITAEAIKVLKAIEEVKPEIKFNFQHHLIGGAAIDATGVPLPDDALEASKKADAVLLGAVGGPKWGTGAVRPEQGLLKIRKELNLYANLRPCNFASESLLDLSPIKAEVVKGTDFVVVRELVGGIYFGERKEDDGSGVASDTETYSVPEVQRITRMAAFMALQHNPPLPIWSLDKANVLASSRLWRKVVTETIEKEFPQLTVQHQLIDSAAMILIKYPTQLNGIVITSNMFGDIISDEASVIPGSLGLLPSASLASLPDSNKAFGLYEPCHGSAPDLPANKVNPIATILSAAMMLKLSLDLYEEGVAVETAVKQVLDAGIRTGDLKGTNSTTEVGDA
type: DOMAIN
name: IsoPropMal-DH-like_dom
description: Isopropylmalate dehydrogenase-like domain

phrase: NMFGDIISDEASVIPGSLG
type: CONSERVED_SITE
name: IsoCit/isopropylmalate_DH_CS
description: Isocitrate/isopropylmalate dehydrogenase, conserved site
Protein sequence:
MHQIYSATSTDKKLPEVVDLFSGCGGLALGFQLAGFNIRKGIELDRDASDVASFNLHWRQGKHDRHLNNDITLLSANEFYNDLDRKNDLIVIGGPPCQAYSKIGRAKLKSLGEERRQENDARGKLYENFLDYALHVDANVIVMENVPEAVNYGGVNIPDTVCDILINKGYDAIWTVLNAADFGVPQTRVRLFVMAIKKDIGKIKFIPEPTHKPHINVKRQSVNVRWMQSEIRNSKYYKQPNIPDETLSDWVTVGDAIGDLPNLFPVYNQKYKNYKPMMMKEYKSPPQNTFQKLMRINNKVDKVTGNMFRNTKRDFSIFDKMEEGDNYLDAHNIAMSLLRKEMRKSGITKENEFEYRLLKDRIVPPYSTEKFVEKWRKLSSDKPSHTLVAHLSTDTYSHLHPREPRGISVREAARLQSFPDDFLFDCSMGAAFKQIGNAVPPLLAKAIAEAMKKNIQGGCI

Annotated regions:
phrase: KQIGNAVPPLLAKAIAEA
type: CONSERVED_SITE
name: C5_meth_CS
description: DNA methylase, C-5 cytosine-specific, conserved site
Protein sequence:
MSTNNSDIRVVVGMSGGVDSSVTAHILKEQGYDVIGIFMKNWDDTDEFGVCTATEDYDDVIRVANQIGIPYYAVNFEKEYWDKVFTYFLDEYKLGRTPNPDVMCNKEIKFKAFLEHAESLGADFVATGHYAQVKKVGDEIELLRGVDNNKDQTYFLNQLSQDQLKKVMFPLGAMEKTEVREIAKKAGLATANKKDSTGICFIGERNFKQFLSEYLPAQPGEMRTLNGEVLGKHDGLMYYTIGQRHGLGIGGDGEPWFVVGKDLKENVLFVEQGFHHETLYSDSLIATDISFTTNAAKPKTIECTAKFRYRQTDTKVTVHLREDGTAEVVFADPVRAITPGQAVVFYDGDICLGGGTIDTVWKNGAKLNYVG

Annotated regions:
phrase: KQFLSEYLPAQPGEMRTLNGEVLGKHDGLMYYTIGQRHGLGIGGDGEPWFVVGKDLKENVLF
type: DOMAIN
name: MnmA-like_central
description: tRNA-specific 2-thiouridylase MnmA-like, central domain

phrase: SDSLIATDISFTTNAAKPKTIECTAKFRYRQTDTKVTVHLREDGTAEVVFADPVRAITPGQAVVFYDGDICLGGGT
type: DOMAIN
name: MnmA-like_C
description: tRNA-specific 2-thiouridylase MnmA-like, C-terminal domain
Protein sequence:
MTKAVHTKHAPAAIGPYSQGIIVNNMFYSSGQIPLTPSGEMVNGDIKEQTHQVFSNLKAVLEEAGASFETVVKATVFIADMEQFAEVNEVYGQYFDTHKPARSCVEVARLPKDALVEIEVIALVK

Annotated regions:
phrase: PARSCVEVARLPKDALVE
type: CONSERVED_SITE
name: RidA_CS
description: RidA, conserved site
Protein sequence:
MQLVFASNNKNKIKEIQQLLPDSISILSLEDIGCNVDIPETADTIEGNAILKANYVTEHYGYPCFADDSGLEIEALNGAPGVYSARFAGQQRNDNDNINKVLDLLKNETNRKANFKTVIALNLKGEQHLFTGIIDGKITNEPLGTNGFGYDPIFIAEGFSDTFAQISLEEKSTISHRGRATAQLVAFLKQ

Annotated regions:
Protein sequence:
MAILAFQKPDKVLMLEADSRFGKFEFRPLEPGFGITVGNALRRILLSSLEGFAINTIKIEGVEHEFASVPGVKEDVTNIILNLKQVRFKQVVEEFENEKVSITVENSSEFKAGDISKYLTGFEVLNPELVICHLDSKATMQMDITINKGRGYVPADENREYCTDVNVIPIDSIYTPIRNVKYQVENFRVEQKTDYEKLVLEITTDGSIHPKEALKEAAKILIYHFMLFSDEKITLETSDVDGNEEFDEEVLHMRQLLKTKLVDMDLSVRALNCLKAADVETLGDLVQFNKTDLLKFRNFGKKSLTELDDLLEGLNLSFGTDISKYKLDKE

Annotated regions:
phrase: VLHMRQLLKTKLVDMDLSVRALNCLKAADVETLGDLVQFNKTDLLKFRNFGKKSLTELDDLL
type: DOMAIN
name: RNAP_asu_C
description: RNA polymerase, alpha subunit, C-terminal

phrase: IKIEGVEHEFASVPGVKEDVTNIILNLKQVRFKQVVEEFENEKVSITVENSSEFKAGDISKYLTGFEVLNPELVICHLDSKATMQMDITINKGRGYVPADENREYCTDVNVIPIDSIY
type: DOMAIN
name: DNA-dir_RNA_pol_insert
description: DNA-directed RNA polymerase, insert domain

phrase: FGKFEFRPLEPGFGITVGNALRRILLSSLEGFAINTIKIEGVEHEFASVPGVKEDVTNIILNLKQVRFKQVVEEFENEKVSITVENSSEFKAGDISKYLTGFEVLNPELVICHLDSKATMQMDITINKGRGYVPADENREYCTDVNVIPIDSIYTPIRNVKYQVENFRVEQKTDYEKLVLEITTDGSIHPKEALKEAAKILIYHFMLFSD
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: RPLEPGFGITVGNALRRILLSSLEGFAINTIKIEGVEHEFASVPGVKEDVTNIILNLKQVRFKQVVEEFENEKVSITVENSSEFKAGDISKYLTGFEVLNPELVICHLDSKATMQMDITINKGRGYVPADENREYCTDVNVIPIDSIYTPIRNVKYQVENFRVEQKTDYEKLVLEITTDGSIHPKEALKEAAKILIYH
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type
Protein sequence:
MSLKLGVIGTGAIGRDHIRRCSQTLLNSQVVAVTDINLEQAAKVVADLKLDAEVYPDGHALINSPQVEAVLVTSWGPSHEEFVLAAIAAGKPVFCEKPLAVTAEGCRRIVDAEVAYGKRLVQVGFMRPYDEGYRALKAVIDSGQIGEPLMLHCAHRNPTVGENYKTDMAITDTLIHELDVLRWLLNDDYVSVQVVFPRKSSKALAHLRDPQIVLLETAKGTRIDVEVFVNCQYGYDIQCEVVGETGIAKLPEPSQVQLRSGAKLSNAILMDWKDRFIGAYDVELQAFIDSVRAGQVGGPSAWDGFAAAVAADACIEAQGSEQIVKMSLPDRPRFYG

Annotated regions:
phrase: KAVIDSGQIGEPLMLHCAHRNPTVGENYKTDMAITDTLIHELDVLRWLLNDDYVSVQVVFPRKSSKALAHLRDPQIVLLETAKGTRIDVEVFVNCQYGYDIQCEVVGETGIAKLPEPSQVQLRSGAKLSNAILMDWKDRFIGAYDVELQAFIDSVRAGQVGGPSAWDGFAAAVAADACIEAQGSEQIV
type: DOMAIN
name: Gfo/Idh/MocA-like_OxRdtase_C
description: Gfo/Idh/MocA-like oxidoreductase, C-terminal

phrase: KLGVIGTGAIGRDHIRRCSQTLLNSQVVAVTDINLEQAAKVVADLKLDAEVYPDGHALINSPQVEAVLVTSWGPSHEEFVLAAIAAGKPVFCEKPLAVTAEGCRRIVDAEVAYGKRLVQVG
type: DOMAIN
name: Gfo/Idh/MocA-like_OxRdtase_N
description: Gfo/Idh/MocA-like oxidoreductase, N-terminal
Protein sequence:
MSAVKVQLVPWTEKYRPARIADVVGNEEAKKKYVAWINSWVKGKPSKKAALLYGPPGSGKTSIVHATAKEFSWELIELNASDVRTREALQQRLLGALNTRSVLGYSGKIILLDEVDGISTKEDAGGLQAIVELIEKSNWPIVLTANDPWDPKLRPLRDLCELIEFKKIGKRDIMKVLENICSKEGVECSREVLSAIADNAKGDLRAAINDLQSLAMGKKTISLADLQILGDRAEQETIFDIVRSVLTAKYPEQALAVTRLPSLDYEMLMQWLSENIVYQYEPSLQAIADAYDALSWADIMLTRMKREQQWALLSYALELMTAGVASARERPPFKFVKYSFPEKLRILARSKEKREKFVRAVRGAAAKIHVSTSKFRTDVLPYLRVIYEHDKKRALEILRNLGVPEDALELATQ

Annotated regions:
phrase: SKKAALLYGPPGSGKTSIVHATAKEFSWELIELNASDVRTREALQQRLLGALNTRSVLGYSGKIILLDEVDGISTKEDAGGLQAIVELIEKSNWPIVLTANDPWDPKLRPLRDLCELIEFKKI
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: IGKRDIMKVLENICSKEGVECSREVLSAIADNAKGDLRAAINDLQSLAMGKKTISLADLQI
type: DOMAIN
name: RFC_lid
description: Replication factor C, lid domain

phrase: LLYGPPGSGKTSIVHATAKEFSWELIELNASDVRTREALQQRLLGALNTRSVLGYSGKIILLDEVDGISTKEDAGGLQAIVELIEKSNWPIVLTANDPWDP
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core
Protein sequence:
MVEQRRLASTEWVDIVNEDNEVIAQSSREQMRAQRLRHRATYIVVHDGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAEHGLFYFEDQHCRVWGALFSCVSHGPFALQEDEVSEVCWLTPEEITARCDEFTPDSLKALALWMTRNAKNEAALQEKPEETE

Annotated regions:
phrase: LRHRATYIVVHDGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAEHGLFYFEDQHCRVWGALFSCVSHGPFALQEDEVSEVCWLTPEEITARCDEFTPDSLKALA
type: DOMAIN
name: NUDIX_hydrolase_dom
description: NUDIX hydrolase domain

phrase: RHRATYIVVHDGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAEHGLFYFEDQHCRVWGALFSCVSHGPFALQEDEVSEVCWLTPEEITARCDEFTP
type: DOMAIN
name: NUDIX_hydrolase_dom
description: NUDIX hydrolase domain
Protein sequence:
MVRISLDVMGGDYGPEVVIPGAARALERHPDIKFVLFGQEARCAELLAKYPKLQASSTFHDCEIAVGMDEKPSQALRRGRGKSTMWKAIDAINADEADVVVSAGNTGALMAMSVFCLRTMQGIQRPAIAAIWPTLKGESIVLDVGATIGADAQQLMDFALMGGAMARALFEVERPSVGLLNVGVEEIKGQEEVKEAGRLIREANIEGIEYYGFVEGDDIGRGTVDVVVTEGFSGNIALKAAEGTARQIAEYLRSAMSRTLLAKIGYIFAKGAFDRLREKMDPRKVNGGVFLGLNGVVIKSHGGTDAEGFAAAIDVGYDMVKNGLKAKIEADLARYHGAEPTEALPPA

Annotated regions:
Protein sequence:
MHMPPHLPASPPLSWPQRLEALLKDLTNFPWKSTARTLRERYSEDRLGLTASSLTFTTTMALVPLVTVALAIFTAFPMFAKLQSVLQKWLVTSLIPDNIARQVLGYLTQFAGQASKLGGAGIALLLVTAVALILTIDHTLNGIWRVRTRRSLGQRVLVYWAALTLGPLVLGVSLSITSYAISASKGVVGVMPGGVQFLLDVLQFFMVAWGMAAMYHFVPNTWVKWSHAWAGGMFVSAGLELAKKLLALYLGKVPTYSVLYGAFATVPILLIWIYVAWIIVLLGAVIAAYLPSLTSGIQHRGRSHGLQFQLALETLQQLERVRSDAVKGLTMQQLAQLLRVDALQLEPVLETLSELDWIGLLNEEFKGEAARYVMLANPDATALAPLLDTLLLRREESTQNLWEKGRWPLLNVRDVL

Annotated regions:
Protein sequence:
MNNNTNGEIIIPQEYLEKSECLFKELKELNINFKEVKHGLAATIKDLLEMNLENSTNILKNLFLKDKKKNYFLICTLNNKTVDLKNLSNILKTNNLRFVDENNLNNILNIQPGCLSPLAIKNDKENIVKLYFDEEIKNMQEVIIHPLHNYSSLYIKTQDVIKFCESFNHAPEYVQIKEDTTSKARVDKKEDVQEEMAKNEELQNNNNNNKNNSNSNNNNNNNNNHIKDTILKGKLLSNNEVEDNKSKDSNILGITSKKIENFSDWYTQVIVKSELIEYYDISGCYILRPAAYYIWECVQAFFNKEIKKLNVENSYFPLFVTKNKLEKEKNHIEGFSPEVAWVTKYGDSNLPEEIAIRPTSETIMYSVFPKWIRSYRDLPLKLNQWNTVVRWEFKQPTPFIRTREFLWQEGHTAHKNEEEAVKLVFDILDLYRRWYEEYLAVPIIKGIKSEGEKFGGANFTSTAEAFISENGRAIQAATSHYLGTNFAKMFKIEFEDENEVKQYVHQTSWGCTTRSIGIMIMTHGDDKGLVLPPNVSKYKVVIVPIFYKTTDENAIHSYCKDIEKILKNAQINCVYDDRASYSPGYKFNHWELRGIPIRIEVGPKDLQNNSCVIVRRDNNEKCNVKKESVLLETQQMLVDIHKNLFLKAKKKLDDSIVQVTSFSEVMNALNKKKMVLAPWCEDIATEEEIKKETQRLSLNQTNSETTLSGAMKPLCIPLDQPPMPPNMKCFWSGKPAKRWCLFGRSY

Annotated regions:
phrase: PEEIAIRPTSETIMYSVFPKWIRSYRDLPLKLNQWNTVVRWEFKQPTPFIRTREFLWQEGHTAHKNEEEAVKLVFDILDLYRRWYEEYLAVPIIKGIKSEGEKFGGANFTSTAEAFISENGRAIQAATSHYLGTNFAKMFKIEFEDENEVKQYVHQTSWGCTTRSIGIM
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: FSEVMNALNKKKMVLAPWCEDIATEEEIKKETQRLSLNQTNSETTLSGAMKPLCIPLDQPPMPPNMKCFWSGKPAKRWCLFGRS
type: DOMAIN
name: Pro-tRNA_ligase_II_C
description: Proline-tRNA ligase, class II, C-terminal

phrase: SEVMNALNKKKMVLAPWCEDIATEEEIKKETQRLSLNQTNSETTLSGAMKPLCIPLDQPPMPPNMKCFWSGKPAKRWCLFGRS
type: DOMAIN
name: Pro-tRNA_ligase_II_C
description: Proline-tRNA ligase, class II, C-terminal

phrase: KVVIVPIFYKTTDENAIHSYCKDIEKILKNAQINCVYDDRASYSPGYKFNHWELRGIPIRIEVGPKDLQNNSCVIVRRDNNEKCNVKKESV
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: GCYILRPAAYYIWECVQAFFNKEIKKLNVENSYFPLFVTKNKLEKEKNHIEGFSPEVAWVTKYGDSNLPEEIAIRPTSETIMYSVFPKWIRSYRDLPLKLNQWNTVVRWEFKQPTPFIRTREFLWQEGHTAHKNEEEAVKLVFDILDLYRRWYEEYLAVPIIKGIKSEGEKFGGANFTSTAEAFISENGRAIQAATSHYLGTNFAKMFKIEFEDENEVKQYVHQTSWGCTTRSIGIMIMTHGDDKGLVL
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: NFSDWYTQVIVKSELIEYYDISGCYILRPAAYYIWECVQAFFNKEIKKLNVENSYFPLFVTKNKLEKEKNHIEGFSPEVAWVTKYGDSNLPEEIAIRPTSETIMYSVFPKWIRSYRDLPLKLNQWNTVVRWEFKQPTPFIRTREFLWQEGHTAHKNEEEAVKLVFDILDLYRRWYEEYLAVPIIKGIKSEGEKFGGANFTSTAEAFISENGRAIQAATSHYLGTNFAKMFKIEFEDENEVKQYVHQTSWGCTTRSIGIMIM
type: DOMAIN
name: ProRS_core_arch_euk
description: Prolyl-tRNA synthetase, catalytic domain

phrase: LAATIKDLLEMNLENSTNILKNLFLKDKKKNYFLICTLNNKTVDLKNLSNILKTNNLRFVDENNLNNILNIQPGCLSPLAIKNDKENIVKLYFDEEIKNMQEVIIHPLHNYSSLYIKTQDVIK
type: DOMAIN
name: YbaK/aa-tRNA-synth-assoc-dom
description: YbaK/aminoacyl-tRNA synthetase-associated domain
Protein sequence:
MVIKAQSPAGFAEEYIIESIWNNRFPPGSILPAERELSELIGVTRTTLREVLQRLARDGWLTIQHGKPTKVNNFWETSGLNILETLARLDHDSVPQLIDNLLSVRTNISTIFIRTAFRQHPDKALAVLDSAREVEDHADAFADLDYNIFRGLAFASGNPIYGLILNGMKGLYTRIGRHYFSSPEARSLALGFYHQLAKVCEGGLHDQVYELVRRYGHDSGEIWHRMQKSLPGDLAMNMR

Annotated regions:
phrase: EYIIESIWNNRFPPGSILPAERELSELIGVTRTTLREVLQRLARDGWLTIQHGKPTKV
type: DOMAIN
name: Tscrpt_reg_HTH_GntR
description: Transcription regulator HTH, GntR

phrase: QSPAGFAEEYIIESIWNNRFPPGSILPAERELSELIGVTRTTLREVLQRLARDGWLTIQHGKPTKVNN
type: DOMAIN
name: Tscrpt_reg_HTH_GntR
description: Transcription regulator HTH, GntR

phrase: NNFWETSGLNILETLARLDHDSVPQLIDNLLSVRTNISTIFIRTAFRQHPDKALAVLDSAREVEDHADAFADLDYNIFRGLAFASGNPIYGLILNGMKGLYTRIGRHYFSSPEARSLALGFYHQLAKVCEGGLHDQVYELVRRYGHDSGEIWHRMQKSLPGD
type: DOMAIN
name: FadR_C
description: FadR, C-terminal domain

phrase: AEEYIIESIWNNRFPPGSILPAERELSELIGVTRTTLREVLQRLARDGWLTIQHGKPTK
type: DOMAIN
name: Tscrpt_reg_HTH_GntR
description: Transcription regulator HTH, GntR

phrase: LPAERELSELIGVT
type: DOMAIN
name: Tscrpt_reg_HTH_GntR
description: Transcription regulator HTH, GntR

phrase: RTTLREVLQRLARDGW
type: DOMAIN
name: Tscrpt_reg_HTH_GntR
description: Transcription regulator HTH, GntR

phrase: FAEEYIIESIWNNRFPPGSILPAERELSELIGVTRTTLREVLQRLARDGWLTIQHGKPTK
type: DOMAIN
name: Tscrpt_reg_HTH_GntR
description: Transcription regulator HTH, GntR