nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MILMPMASVVAVAEPKWVSVWGRFLWMTLLSMALGSLLALLLPLGAVEEQCLAVLRGFHLLRSKLDRAQHVVTKCTSPSTELSVTSRDAGLLTVKTKASPAGKLEAKAALNQALEMKRQGKRGKAHKLFLHALKMDPGFVDALNELGIFSEEDKDIIQADYLYTRALTISPFHEKALINRDRTLPLVEEIDQRYFSVLDSKVRKVMSIPKGSSALRRVMEETYYHHIYHTVAIEGNTLTLAEIRHILETRYAVPGKSLEEQNEVIGMHAAMKYINSTLVSRIGSVTIDHMLEIHRRVLGYVDPVEAGRFRRTQVLVGHHIPPHPRDVEKQMQEFTQWLNSEDAMNLHPVEFAALAHYKLVYIHPFIDGNGRTSRLLMNLILMQAGYPPITIRKEQRSEYYHVLEVANEGDVRPFIRFIAKCTEVTLDTLLLATTEYSAALPEAQPNHSGFKETLPVRP

Annotated regions:
phrase: VTIDHMLEIHRRVLGYVDPVEAGRFRRTQVLVGHHIPPHPRDVEKQMQEFTQWLNSEDAMNLHPVEFAALAHYKLVYIHPFIDGNGRTSRLLMNLILMQAGYPPITIRKEQRSEYYHVLEVANEGDVRPFIRFIA
type: DOMAIN
name: Fido
description: Fido domain

phrase: VTIDHMLEIHRRVLGYVDPVEAGRFRRTQVLVGHHIPPHPRDVEKQMQEFTQWLNSEDAMNLHPVEFAALAHYKLVYIHPFIDGNGRTSRLLMNLI
type: DOMAIN
name: Fido
description: Fido domain
Protein sequence:
MADLQATLDSIYTDILPRIGEGKVADYIPELAKIDPRQFGMAIVTVDGQVFRVGDADIAFSIQSISKVFMLTLALGKVGEGLWKRVGREPSGSAFNSIVQLEHESGIPRNPFINAGAIAVTDVVMAGHAPREAIGELLRFVRYLADDESITIDDKVARSETQTGYRNVALANFMRAYRNLDHPVDHVLGVYFHQCALAMSCEQLARAGLFLAARGSNPMTGHSVVSPKRARRINALMLTCGHYDGSGDFAYHVGLPGKSGVGGGIFAVAPGIASIAVWSPGLNKVGNSQLGAVALEMLAARTGWSVFGD

Annotated regions:
Protein sequence:
MGGKWSKSSIVGWPEIRERIRKTPAAAPGVGAVSQDLDKHGAITSSNVNHPSCAWLEAQEDEEVGFPVRPQVPLRPMTYKGALDLSHFLKEKGGLDGIIYSRRRQDILDLWVYNTQGYFPDWQNYTPGPGIGFPLTFGWCFKLVPVDPAEVEKDTEGENNSLLHPICQHGMDDADRETLMWKFDPTLALKHRAREKHPEFYKDC

Annotated regions:
Protein sequence:
MSQRDTLVHLFAGGCGGTVGAILTCPLEVVKTRLQSSSVTLYISEVHLNTVNGASVNRVTRVSPGPLHCLKMILQKEGPRSLFRGLGPNLVGVAPSRAIYFAAYSNCKEKLNNIFNPDSTQVHMISAGVAGFTAITMTNPIWLVKTRLQLDARNRGEKRMSAFECVRKVYRSDGIKGFYRGMSASYAGISETVIHFVIYESIKRKLLEHKTASAMDSEDESAKEASDFVGMMMAAATSKTCATSIAYPHEVVRTRLREEGTKYRSFFQTLSLLVREEGYGSLYRGLTTHLVRQIPNTAIMMSTYEVVVYLLDG

Annotated regions:
phrase: STQVHMISAGVAGFTAITMTNPIWLVKTRLQLDARNRGEKRMSAFECVRKVYRSDGIKGFYRGMSASYAGISETVIHFVIYESIKRKLLE
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier

phrase: DFVGMMMAAATSKTCATSIAYPHEVVRTRLREEGTKYRSFFQTLSLLVREEGYGSLYRGLTTHLVRQIPNTAIMMSTYEVVV
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier

phrase: DTLVHLFAGGCGGTVGAILTCPLEVVKTRLQSSSVTLYISEVHLNTVNGASVNRVTRVSPGPLHCLKMILQKEGPRSLFRGLGPNLVGVAPSRAIYFAAYSNCKEKLN
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier

phrase: SDFVGMMMAAATSKTCATSIAYPHEVVRTRLREEGTKYRSFFQTLSLLVREEGYGSLYRGLTTHLVRQIPNTAIMMSTYEVVVY
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier

phrase: RDTLVHLFAGGCGGTVGAILTCPLEVVKTRLQSSSVTLYISEVHLNTVNGASVNRVTRVSPGPLHCLKMILQKEGPRSLFRGLGPNLVGVAPSRAIYFAAYSNCKE
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier

phrase: DSTQVHMISAGVAGFTAITMTNPIWLVKTRLQLDARNRGEKRMSAFECVRKVYRSDGIKGFYRGMSASYAGISETVIHFVIYESIKR
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier
Protein sequence:
MPKNKGKGGKNRRRGKNENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMLFDGVKRLFHIRGKLRKKVWINTSDIILVGLREYQDNKADVILKYNADEARSLKAYGELPEHAKINETDTFGPGDDDEIQFDDIGDDDEDIDDI

Annotated regions:
phrase: GQEYAQVIKMLGNGRLEAMLFDGVKRLFHIRGKLRKKVWINTSDIILVGLREYQDNKADVI
type: DOMAIN
name: RNA-binding_domain_S1_IF1
description: RNA-binding domain, S1, IF1 type

phrase: EKRELVFKEDGQEYAQVIKMLGNGRLEAMLFDGVKRLFHIRGKLRKKVWINTSDIILVGLREYQDNKADVILKY
type: DOMAIN
name: RNA-binding_domain_S1_IF1
description: RNA-binding domain, S1, IF1 type

phrase: MLGNGRLEAMLFDGVKRLFHIR
type: CONSERVED_SITE
name: TIF_eIF-1A_CS
description: Translation initiation factor 1A (eIF-1A), conserved site
Protein sequence:
MAGGREIKTKIKSVQNTRKVTRALEMVSASKIRKAQERMKTSRPYAQAMKQVIGHLAQASTDFQHPFLIEREQVKRVGYIVISSDRGLAGGLNNNLFRKMLGEVRPWQDKGAEIDVVTIGQKASAFFRRVKVNMVGSVTHLGDSPQVEQLIGVIKVMIDAFIEGKVDRVYLVYNRFVNTMTQKASFDQLLPLPAAEHKVAHHDWDYLYEPDAASVLEHVMTRYIESLVYQAVLENVASEHAARMVAMKAASDNANKMIGTLQLVYNKARQAAITQEISEIVSGAAAV

Annotated regions:
phrase: ITQEISEIVSGAA
type: CONSERVED_SITE
name: ATP_synth_F1_gsu_CS
description: ATP synthase, F1 complex, gamma subunit conserved site
Protein sequence:
MAKLLIMSIVSFCFIFLLLLFFRYILKRYFNYMLNYKVWYLTLLAGLIPFIPIKFSLFKFNNVNNQAPTVESKSHDLNHNINTTKPIQEFATDIHKFNWDSIDNISTVIWIVLVIILSFKFLKALLYLKYLKKQSLYLNENEKNKIDTILFNHQYKKNIVIRKAETIQSPITFWYGKYIILIPSSYFKSVIDKRLKYIILHEYAHAKNRDTLHLIIFNIFSIIMSYNPLVHIVKRKIIHDNEVEADRFVLNNINKNEFKTYAESIMDSVLNVPFFNKNILSHSFNGKKSLLKRRLINIKEANLKKQSKLILIFICIFTFLLMVIQSQFLMGQSITDYNYKKPLHNDYQILDKSKIFGSNSGSFVMYSMKKDKYYIYNEKESRKRYSPNSTYKIYLAMFGLDRHIINDENSRMSWNHKHYPFDAWNKEQDLNTAMQNSVNWYFERISDQIPKNYTATQLKQLNYGNKNLGSYKSYWMEDSLKISNLEQVIVFKNMMEQNNHFSKKAKNQLSSSLLIKKNEKYELYGKTGTGIVNGKYNNGWFVGYVITNHDKYYFATHLSDGKPSGKNAELISEKILKEMGVLNGQ

Annotated regions:
phrase: LLIMSIVSFCFIFLLLLFFRYILKRYFNYMLNYKVWYLTLLAGLIPFIPIKFSLFKFNNVNNQAPTVESKSHDLNHNINTTKPIQEFATDIHKFNWDSIDNISTVIWIVLVIILSFKFLKALLYLKYLKKQSLYLNENEKNKIDTILFNHQYKKNIVIRKAETIQSPITFWYGKYIILIPSSYFKSVIDKRLKYIILHEYAHAKNRDTLHLIIFNIFSIIMSYNPLVHIVKRKIIHDNEVEADRFVLNNINKNEFKTYAESIMDSVLNVPFFNKNILSHSFNGKKSLLKRRLIN
type: DOMAIN
name: Peptidase_M56
description: Peptidase M56

phrase: SMKKDKYYIYNEKESRKRYSPNSTYKIYLAMFGLDRHIINDENSRMSWNHKHYPFDAWNKEQDLNTAMQNSVNWYFERISDQIPKNYTATQLKQLNYGNKNLGSYKSYWMEDSLKISNLEQVIVFKNMMEQNNHFSKKAKNQLSSSLLIKKNEKYELYGKTGTGIVNGKYNNGWFVGYVITNHDKYYFATHLSDGKPSGKNAELISEKI
type: DOMAIN
name: PCN-bd_Tpept
description: Penicillin-binding protein, transpeptidase
Protein sequence:
MKTGIVTTLIALCLPVSVFATTLRLSTDVDLLVLDGKKVSSSLLRGADSIELDNGPHQLVFRVEKTIHLSNSEERLYISPPLVVSFNTQLINQVNFRLPRLENEREANHFDAAPRLELLDGDATPIPVKLDILAITSTAKTIDYEVEVERYNKSAKRASLPQFATMMADDSTLLSGVSELDAIPPQSQVLTEQRLKYWFKLADPQTRNTFLQWAEKQPSS

Annotated regions:
Protein sequence:
MGGCFSNRIKTDIASSTWLSSKFLSRDGSKGSSTASFSYMPRTEGEILQNANLKNFSLSELKSATRNFRPDSVVGEGGFGCVFKGWIDESSLAPSKPGTGIVIAVKRLNQEGFQGHREWLAEINYLGQLDHPNLVKLIGYCLEEEHRLLVYEFMTRGSLENHLFRRGTFYQPLSWNTRVRMALGAARGLAFLHNAQPQVIYRDFKASNILLDSNYNAKLSDFGLARDGPMGDNSHVSTRVMGTQGYAAPEYLATGHLSVKSDVYSFGVVLLELLSGRRAIDKNQPVGEHNLVDWARPYLTNKRRLLRVMDPRLQGQYSLTRALKIAVLALDCISIDAKSRPTMNEIVKTMEELHIQKEASKEQQNPQISIDNIINKSPQAVNYPRPSIM

Annotated regions:
phrase: SVVGEGGFGCVFKGWIDESSLAPSKPGTGIVIAVKRLNQEGFQGHREWLAEINYLGQLDHPNLVKLIGYCLEEEHRLLVYEFMTRGSLENHLFRRGTFYQPLSWNTRVRMALGAARGLAFLHNAQPQVIYRDFKASNILLDSNYNAKLSDFGLARDGPMGDNSHVSTRVMGTQGYAAPEYLATGHLSVKSDVYSFGVVLLELLSGRRAIDKNQPVGEHNLVDWARPYLTNKRRLLRVMDPRLQGQYSLTRALKIAVLALDCISIDAKSRPTMNEIVK
type: DOMAIN
name: Ser-Thr/Tyr_kinase_cat_dom
description: Serine-threonine/tyrosine-protein kinase, catalytic domain

phrase: VIYRDFKASNIL
type: ACTIVE_SITE
name: Ser/Thr_kinase_AS
description: Serine/threonine-protein kinase, active site

phrase: FRPDSVVGEGGFGCVFKGWIDESSLAPSKPGTGIVIAVKRLNQEGFQGHREWLAEINYLGQLDHPNLVKLIGYCLEEEHRLLVYEFMTRGSLENHLFRRGTFYQPLSWNTRVRMALGAARGLAFLHNAQPQVIYRDFKASNILLDSNYNAKLSDFGLARDGPMGDNSHVSTRVMGTQGYAAPEYLATGHLSVKSDVYSFGVVLLELLSGRRAIDKNQPVGEHNLVDWARPYLTNKRRLLRVMDPRLQGQYSLTRALKIAVLALDCISIDAKSRPTMNEIVKTMEE
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: VGEGGFGCVFKGWIDESSLAPSKPGTGIVIAV
type: BINDING_SITE
name: Protein_kinase_ATP_BS
description: Protein kinase, ATP binding site
Protein sequence:
MFKFNDDKGQLKCSFCGKSQEQVRKLVAGPGVYICDECIELCNEIVQEELGTEEEIDMKEIPKPVEIRKILDDYVIGQDMAKKSLSVAVYNHYKRINSGAKIEDVELQKSNIMLIGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGGRKHPHQEFIQIDTSNILFICGGAFDGVEQIIKRRLGKKVIGFGADFGDGVKGDLKAGEYLKYILPEDLLKFGLIPEFVGRLPVLATLEPLDEETLVRILTEPKNSLVKQYQKLLSLDGVELEFDNGALLQIAKEAIKRNTGARGLRAIIEQIMLDMMYELPSREDVNKCVITEETVRDKVKPQLLTKEGQELHEETA

Annotated regions:
phrase: MFKFNDDKGQLKCSFCGKSQEQVRKLVAGPGVYICDECIELCNEIVQEELGTE
type: DOMAIN
name: Znf_CppX_C4
description: Zinc finger, ClpX C4-type

phrase: LDEETLVRILTEPKNSLVKQYQKLLSLDGVELEFDNGALLQIAKEAIKRNTGARGLRAIIEQIMLDMMYELPSREDVNKCVITEETVRDKVKPQ
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal

phrase: LDEETLVRILTEPKNSLVKQYQKLLSLDGVELEFDNGALLQIAKEAIKRNTGARGLRAIIEQIMLDMMYELPSREDV
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal

phrase: QKSNIMLIGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGGRKHPHQEFIQIDTSNILFICGGAFDGVEQIIKRRLGKKVIGFGADFGDGVKGDLKAGEYLKYILPEDLLKFGLIPEFVGRLP
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: QLKCSFCGKSQEQVRKLVAGPGVYICDECIELCNEIVQE
type: DOMAIN
name: Znf_CppX_C4
description: Zinc finger, ClpX C4-type

phrase: KCSFCGKSQEQVRKLVAGPGVYICDECIELCNEIVQ
type: DOMAIN
name: Znf_CppX_C4
description: Zinc finger, ClpX C4-type

phrase: QKSNIMLIGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGGRKHPHQEFIQIDTSNILFICGGAFDGVEQIIKRR
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain
Protein sequence:
MVLIRVLANLLVLQLSYAQMSSELVVGGGECNRNRHRSLALLYNSSGTLCGGTLIHEEWVLSAAHCDMENMKIYLGLHNLSLPNKDQQKREPRETHFCLPSRNYTLWDKDIMLIKLNRPVNNSPHIAPISLPSNPPRLRSVCHIMGWGAITSPNETYPDVPHCANINILRYSVCRAAFGRLPAQSRTLCAGILRGGIDTCLGDSGGPLICNGQIQGIVSWGAEVCAKPHAPGLYTKVSDYTDWIQSIIAGNTTATCPP

Annotated regions:
phrase: LVVGGGECNRNRHRSLALLYNSSGTLCGGTLIHEEWVLSAAHCDMENMKIYLGLHNLSLPNKDQQKREPRETHFCLPSRNYTLWDKDIMLIKLNRPVNNSPHIAPISLPSNPPRLRSVCHIMGWGAITSPNETYPDVPHCANINILRYSVCRAAFGRLPAQSRTLCAGILRGGIDTCLGDSGGPLICNGQIQGIVSWGAEVCAKPHAPGLYTKVSDYTDW
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain

phrase: VVGGGECNRNRHRSLALLYNSSGTLCGGTLIHEEWVLSAAHCDMENMKIYLGLHNLSLPNKDQQKREPRETHFCLPSRNYTLWDKDIMLIKLNRPVNNSPHIAPISLPSNPPRLRSVCHIMGWGAITSPNETYPDVPHCANINILRYSVCRAAFGRLPAQSRTLCAGILRGGIDTCLGDSGGPLICNGQIQGIVSWGAEVCAKPHAPGLYTKVSDYTDW
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain

phrase: DTCLGDSGGPL
type: ACTIVE_SITE
name: TRYPSIN_SER
description: Serine proteases, trypsin family, serine active site

phrase: LSAAH
type: ACTIVE_SITE
name: TRYPSIN_HIS
description: Serine proteases, trypsin family, histidine active site

phrase: VVGGGECNRNRHRSLALLYNSSGTLCGGTLIHEEWVLSAAHCDMENMKIYLGLHNLSLPNKDQQKREPRETHFCLPSRNYTLWDKDIMLIKLNRPVNNSPHIAPISLPSNPPRLRSVCHIMGWGAITSPNETYPDVPHCANINILRYSVCRAAFGRLPAQSRTLCAGILRGGIDTCLGDSGGPLICNGQIQGIVSWGAEVCAKPHAPGLYTKVSDYTDWIQSII
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain

phrase: VVGGGECNRNRHRSLALLYNSSGTLCGGTLIHEEWVLSAAHCDMENMKIYLGLHNLSLPNKDQQKREPRETHFCLPSRNYTLWDKDIMLIKLNRPVNNSPHIAPISLPSNPPRLRSVCHIMGWGAITSPNETYPDVPHCANINILRYSVCRAAFGRLPAQSRTLCAGILRGGIDTCLGDSGGPLICNGQIQGIVSWGAEVCAKPHAPGLYTKVSDYTDWIQS
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain
Protein sequence:
MLKILIPTIMLFPTTWFMNKKWLWSSITTHSLLISLLSLSWFKWNMDIGWDFSNQYLAIDPLSAPLLILTCWLLPLMILASQNHITPEPLTRQRIYISLLISLQVFLIMAFSATEMILFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLIGSLPLLIALLFMQNDLNTLSMFIIQYSHLPNPSSWANKFWWTACLIAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRIIIMLNPITKEMAYPFIILAIWGIVMTSSICLRQTDLKSMIAYSSVSHMGLVAGAILIQTPWSFAGAITLMIAHGLVSSALFCLANTNYERIHSRTLLLARGVQVILPLMATWWLLANLANLALPPSPNLVGELLIISSLFNWSNWTILLTGIGVLITASYSLYMFLMTQRGLTSKHLMNLNPSHTREHLLLTLHVLPVLLLILKPELIWGWTF

Annotated regions:
phrase: MLKILIPTIMLFPTTWFMNKKWLWSSITTHSLLISLLSLSWFKWNMDIGWDFSNQYLAIDPLSAPLLILTCWLLPLMILASQNHITPEPLTRQRIYISLLISLQVFLIM
type: DOMAIN
name: NADH4_N
description: NADH:ubiquinone oxidoreductase chain 4, N-terminal

phrase: ATEMILFYIMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLIGSLPLLIALLFMQNDLNTLSMFIIQYSHLPNPSSWANKFWWTACLIAFLVKMPLYGVHLWLPKAHVEAPIAGSMILAAVLLKLGGYGMMRIIIMLNPITKEMAYPFIILAIWGIVMTSSICLRQTDLKSMIAYSSVSHMGLVAGAILIQTPWSFAGAITLMIAHGLVSSALFCLANTNYERIHSRTLLLARGVQVILPLMATWWLLANLANLALPPSPNLVGELLIISSLFNWSNWTILLTGIGVLI
type: DOMAIN
name: ND/Mrp_TM
description: NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domain
Protein sequence:
MSDTAPDPSLPRAAALIVAAGRGTRMGGEVPKQYQVLGGEAVLTRTIRAFSEHPGIEAVVIVRHADDSDLCRAALPRTGTPLIEVIGGASRGASVKAGLAAVPEGVAHVLIHDGARPLVSAATISDVLAALRASPGAAPGLEVTDALWRGDAHVTGFAPRDGLYRAQTPQGFDLAAIRAAYEVHDGPAADDVEVARADGLDVAIIRGDEDNLKLTRAGDFARAEAILKARTMLDIRTGNGFDVHRFGPGTHVMLAGIRVPHTRGLQGHSDADVGLHTVTDAIYGALAKGDIGQHXPPSDPQWKGAASHIFLTHAVDLAAGDGFALTHADLTLICETPKIGPHAPAMRKELARLLRVDTSRVSVKATTSERLGFTGRGEGIAALATVTLVKS

Annotated regions:
phrase: SDADVGLHTVTDAIY
type: CONSERVED_SITE
name: MECDP_synthase_CS
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site

phrase: IRTGNGFDVHRFGPGTHVMLAGIRVPHTRGLQGHSDADVGLHTVTDAIYGALAKGDIGQHXPPSDPQWKGAASHIFLTHAVDLAAGDGFALTHADLTLICETPKIGPHAPAMRKELARLLRVDTSRVSVKATTSERLGFTGRGEGIAALATVT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RTGNGFDVHRFGPGTHVMLAGIRVPHTRGLQGHSDADVGLHTVTDAIYGALAKGDIGQHXPPSDPQWKGAASHIFLTHAVDLAAGDGFALTHADLTLICETPKIGPHAPAMRKELARLLRVDTSRVSVKATTSERLGFTGRGEGIAALATVT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RTGNGFDVHRFGPGTHVMLAGIRVPHTRGLQGHSDADVGLHTVTDAIYGALAKGDIGQHXPPSDPQWKGAASHIFLTHAVDLAAGDGFALTHADLTLICETPKIGPHAPAMRKELARLLRVDTSRVSVKATTSERLGFTGRGEGIAALATVTLV
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: IRTGNGFDVHRFGPGTHVMLAGIRVPHTRGLQGHSDADVGLHTVTDAIYGALAKGDIGQHXPPSDPQWKGAASHIFLTHAVDLAAGDGFALTHADLTLICETPKIGPHAPAMRKELARLLRVDTSRVSVKATTSERLGFTGRGEGIAALATVTLV
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: EAILKARTMLDIRTGNGFDVHRFGPGTHVMLAGIRVPHTRGLQGHSDADVGLHTVTDAIYGALAKGDIGQHXPPSDPQWKGAASHIFLTHAVDLAAGDGFALTHADLTLICETPKIGPHAPAMRKELARLLRVDTSRVSVKATTSERLGFTGRGEGIAALATVTLV
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: VLIHDGA
type: CONSERVED_SITE
name: ISPD_synthase_CS
description: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site
Protein sequence:
MQITREKWSKNFSEWFDWVLREGEFYDYGRYPVKGMGVWMPYGFKLRQNIISIIRNLLDSTGHEEVLFPLLIPEDLLSRESTHIKGFEEEVFWVTKGGSEDLDVKLALRPTSEVAITTMENLWLKSYKQLPKKYYQIVSVFRYETKATRPMIRLREITTFKEAHTVHETYDDAQRQVEEAIEIYKKIFNNLAIPYVLSERPEWDRFAGALHTYAFDTIMPDGKVMQIGTVHHLGQNFSRALDFKIQKKDGSLDYPHQTSYGISDRAIASVIAIHGDDHGPILPPSVAPIKVVVVPIPAKNEEGTQQVMKYSVEICEMLNKNNITCVTDQDTEKTPGEKFYIWEIKGVPIRLEIGPRELASSTVFIKRRDNLKSYTVKKEEVVNKVKEVLNEIQEDLRKRAWESLKSRIEYANDIEKAKNLLENNSGIVEVPWCGSKECGLKIEELTNARVLGYPIEDRKVNDKCVICKMNAKTVLRVAKTY

Annotated regions:
phrase: IEKAKNLLENNSGIVEVPWCGSKECGLKIEELTNARVLGYPIEDRKVNDKCVICKMNAKTVLRVAKT
type: DOMAIN
name: Pro-tRNA_ligase_II_C
description: Proline-tRNA ligase, class II, C-terminal

phrase: KVVVVPIPAKNEEGTQQVMKYSVEICEMLNKNNITCVTDQDTEKTPGEKFYIWEIKGVPIRLEIGPRELASSTVFIKRRDNLKSYTVKKEEVVNKVK
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: EDLDVKLALRPTSEVAITTMENLWLKSYKQLPKKYYQIVSVFRYETKATRPMIRLREITTFKEAHTVHETYDDAQRQVEEAIEIYKKIFNNLAIPYVLSERPEWDRFAGALHTYAFDTIMPDGKVMQIGTVHHLGQNFSRALDFKIQKKDGSLDYPHQTSYGISDRAIASVIA
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: EKAKNLLENNSGIVEVPWCGSKECGLKIEELTNARVLGYPIEDRKVNDKCVICKMNAKTVLRVAKT
type: DOMAIN
name: Pro-tRNA_ligase_II_C
description: Proline-tRNA ligase, class II, C-terminal

phrase: NFSEWFDWVLREGEFYDYGRYPVKGMGVWMPYGFKLRQNIISIIRNLLDSTGHEEVLFPLLIPEDLLSRESTHIKGFEEEVFWVTKGGSEDLDVKLALRPTSEVAITTMENLWLKSYKQLPKKYYQIVSVFRYETKATRPMIRLREITTFKEAHTVHETYDDAQRQVEEAIEIYKKIFNNLAIPYVLSERPEWDRFAGALHTYAFDTIMPDGKVMQIGTVHHLGQNFSRALDFKIQKKDGSLDYPHQTSYGISDRAIASVIA
type: DOMAIN
name: ProRS_core_arch_euk
description: Prolyl-tRNA synthetase, catalytic domain

phrase: PYGFKLRQNIISIIRNLLDSTGHEEVLFPLLIPEDLLSRESTHIKGFEEEVFWVTKGGSEDLDVKLALRPTSEVAITTMENLWLKSYKQLPKKYYQIVSVFRYETKATRPMIRLREITTFKEAHTVHETYDDAQRQVEEAIEIYKKIFNNLAIPYVLSERPEWDRFAGALHTYAFDTIMPDGKVMQIGTVHHLGQNFSRALDFKIQKKDGSLDYPHQTSYGISDRAIASVIAIHGDDHGPIL
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II
Protein sequence:
MSSYPPHVIVLIGATASGKTELAIEIAEYFKTRIHNIDSRQIYKSMDIGTAKPSENQQKKIKHFLIDIEEPINPINVKQFQEIAQKSIQKEIKQNNLPLLVGGSGLYMNAITKGFFVPDVPPQNNLREQLEELGQKECWELLKNCDPISAKKINLADQIRTIRALEVFYVTGKPLSSQKVQKPPQWKILELGLNRDNLKERISRRTKNMFLSGIIEETKNLISRYGSDLPILETIGYREAKDVLNNNLPIDKAIELTNIKTNQFAKRQKTWFRNKNNPIWLNNKNLLKDAIIKIESFLD

Annotated regions:
Protein sequence:
MAKTLPIMFQGTHSDAGKSVIATAFCRMFAQDGWKTAPFKSQNMSLNSYVTPDGNEIGRAQGIQAEAAGVAARAEMNPILIKPSREHESQIVVLGKPYGNMQAFAYRNEFFHQGLAVIRQSLETLMNEYDRIVIEGAGSPAEVNLNDRELVNMRVARLANAPVVLIGDIERGGVFASLVGTLALLEPEDRKRVVGVIINKFRGDAALLKPGLDWFEQYTGVPVLGVVPHLPDLAIDAEDSLALERFAASSDDKGAIDIAVIRCPKIANFTDIDPLLTEPDCRVRLVTHAGELGEPDVIVLPGSKNTIEDLMYMKKRGLASRIVSLVNEGKTTVVGLCGGYQMLGDVIRDPHGVETPFPEVKGLGLLPVATTLERTKTTVRSEGMLTWAGERFSVRGYEIHMGRSTPLPGYVPLIEIGGRGEGAKREDGRVLGTYMHDLFHNDAFRTAFFNVIRREKGLASSAVRPFHSLKEAAFDRLAAHVRQHVAVERIEQMMRQFQQR

Annotated regions:
phrase: PIMFQGTHSDAGKSVIATAFCRMFAQDGWKTAPFKSQNMSLNSYVTPDGNEIGRAQGIQAEAAGVAARAEMNPILIKPSREHESQIVVLGKPYGNMQAFAYRNEFFHQGLAVIRQSLETLMNEYDRIVIEGAGSPAEVNLNDRELVNMRVARLANAPVVLIGDIERGGVFASLVGTLALLEPEDRKRVVGVIINKFRGDAALLKPGLDWFEQYTGVPVLGVV
type: DOMAIN
name: CobQ_N
description: Cobyric acid synthase, N-terminal domain

phrase: IMFQGTHSDAGKSVIATAFCRMFAQDGWKTAPFKSQNMSLNSYVTPDGNEIGRAQGIQAEAAGVAARAEMNPILIKPSREHESQIVVLGKPYGNMQAFAYRNEFFHQGLAVIRQSLETLMNEYDRIVIEGAGSPAEVNLNDRELVNMRVARLANAPVVLIGDIERGGVFASLVGTLALLEPEDRKRVVGVIINKFRGDAALLKPGLDWFEQYTGVPVLGVVPHLPDL
type: DOMAIN
name: CobQ/CobB/MinD/ParA_Nub-bd_dom
description: CobQ/CobB/MinD/ParA nucleotide binding domain

phrase: IAVIRCPKIANFTDIDPLLTEPDCRVRLVTHAGELGEPDVIVLPGSKNTIEDLMYMKKRGLASRIVSLVNEGKTTVVGLCGGYQMLGDVIRDPHGVETPFPEVKGLGLLPVATTLERTKTTVRSEGMLTWAGERFSVRGYEIHMGRSTPLPGYVPLIEIGGRGEGAKREDGRVLGTYMHDLFHNDAFRTAF
type: DOMAIN
name: CobQ_GATase1
description: Cobyric acid synthase, glutamine amidotransferase type 1

phrase: DIAVIRCPKIANFTDIDPLLTEPDCRVRLVTHAGELGEPDVIVLPGSKNTIEDLMYMKKRGLASRIVSLVNEGKTTVVGLCGGYQMLGDVIRDPHGVETPFPEVKGLGLLPVATTLERTKTTVRSEGMLTWAGERFSVRGYEIHMGRSTPLPGYVPLIEIGGRGEGAKREDGRVLGTYMHDLFHND
type: DOMAIN
name: GATase_3
description: CobB/CobQ-like glutamine amidotransferase
Protein sequence:
MPIVAHNDLPTFARLREEGQQILDPDFALHQDIRELHIGLLNMMPDAALAATERQFFRLIGESNQIAQFYVHPFTLKELERGPEARAHVERYYQSFDQIRADGLDALIITGANVTGPDLALEPFWEPLIEVVDWAYDNVCSTLCSCLATHAVMQFRYGERRRRLPAKRWGVFPHRVLARTHPLVADVNTCFDVPHSRFNDISHAQFVGAGLHVLVESEEAGVHLAVSPDGFRQVFFQGHPEYDTISLLKEYKREVGRFAAGARSDYPPFPDNYFGLQTRAILNEHRECVIRALDQGRKPPELPERLIAAALHNTWHDTAEGVIGNWMGLIYQITHHDRRQTFMAGIDPNDPLGLCCG

Annotated regions:
Protein sequence:
MKSNTKNSVKRKSPPPVNPNKKFPSFEGKQTSIKDFFFNDTTTPPKTPTQPIRFTQNNNKENDKSNNNNNNNNTITPIKKTTTTTTVVVESFDDSRNTNLIQQFQKASTPSSPQIPNKLPQQENQQQIPNTQQQQIKQLQQQQQQQQQESPNNLFKTIKTTTTTETFEEFLLSQPTTPPPSNTTTTTTTTSSSSPSSSNNITTIDDKNNLIKNNRYYLNDFLIVTETVYKRDKHLFINDEKDYIEGMIETLDRDSQHLFVRLYNRKGPWFQINELKSSNYQNEIKNIGAAIESLVEYGFLEYYSSDKHDYNEIANLLKIDQLKSIASSFSIPNSSGKETFLKVISGEPFKGQSTLFSPKPIYKKKVENLVGESIKIVTEVVELWRMIHHLYFYSWSTHDSKSMIVNNIMGIKYPEYTVWKSKVKKEVQQKEEEVEKEKEEILQNQLIQVKQESDVIDLTQNSSGSSNNNNNNNNNNNNNNNNNNNIKEYDIDLTENESIFPNRESLLKYENARKLEEKSINLYESGGDLVALESILQVCLDELGRSVSKKVKYSFALKFTVGWVYTRILSWSIDIFEKLRKYQQCIDFLMLLIESPYCRGKRGYWWQRMIINHKHLHRSDDALLIAERSLKEDPFLRSGDRLAIEKHLIQLSSPPRRWRIPAGLIQFSYKLKEPISTTIYREKVSNNQQGYKSKYLFLTPQIKINKIKKIIIKSSQSQNNQQKVQSSLSSQIQTQIQTQIQTQIQSSQIQIQSPIQSQSQSQNQTPIQSQINNNNNNILAISSQKSFDSILTTTSINNTQSSSQNIYIDEETSLEITSDDELFPPGQSYKIEKENQLQITNSVKKEEEQEEEEEEEEEGQGQEEEEEEEEIIEITHGTVEEVSLEHYSQNGGWEGIHCETSIFITLYVLYFWDIIFDSNVPHVFQSPFQNSPLDFGSDEFYFTRKEAIDNRIKRLEHSNYDDLLILLNQSWLHNGCEARGVNWKSTSLEQLSIISKCLGGKLIAFISRLLTEDFKSFSHGMPDLLLWKLNNNNDDDIDDKNNNNSSIKFVEVKGTGDRLRDQQRIWIDMLISFGCDVEVCLVKNKKN

Annotated regions:
phrase: LEHSNYDDLLILLNQSWLHNGCEARGVNWKSTSLEQLSIISKCLGGKLIAFISRLLTEDFKSFSHGMPDLLLWKLNNNNDDDIDDKNNNNSSIKFVEVKGTGDRLRDQQRIWIDMLISFGCDVEVCLVK
type: DOMAIN
name: VRR_NUC
description: VRR-NUC domain

phrase: DLLILLNQSWLHNGCEARGVNWKSTSLEQLSIISKCLGGKLIAFISRLLTEDFKSFSHGMPDLLLWKLNNNNDDDIDDKNNNNSSIKFVEVKGTGDRLRDQQRIWIDMLISFGCDVEVCLV
type: DOMAIN
name: VRR_NUC
description: VRR-NUC domain

phrase: SFALKFTVGWVYTRILSWSIDIFEKLRKYQQCIDFLMLLIESPYCRGKRGYWWQRMIINHKHLHRSDDALLIAERSLKEDPFLRSGDRLAIEKHL
type: DOMAIN
name: FAN1-like_TPR
description: Fanconi-associated nuclease 1-like, TPR domain

phrase: YYLNDFLIVTETVYKRDKHLFINDEKDYIEGMIETLDRDSQHLFVRLYNRKGPWFQINELKSSNYQNEIKNIGAAIESLVEYGFL
type: DOMAIN
name: FAN1-like_WH
description: Fanconi-associated nuclease 1-like, winged-helix domain
Protein sequence:
MNECIVIKCGGSMLERLDSTFFHCIEKLKRKYRIVIVHGGGPDIDKILKKLQIPIEKKHGLRVTSQEVMEVVQMVLCGSTNKNLVQNFQRYGLPAIGISGCDGKLLQAKPLNKKIGYVGEVSKVESSLLEGVLNLNYIPIIAPIGIGEEQVYNINADIAAAGIAAALRVKELIFITDVDGLLYEGKLVKKTDEIEILDMIEKEIITGGMIPKVQAALVALRMGIQSVSIVNGTKNFIGLTGEWIGTTVTRGRLQYE

Annotated regions:
phrase: CIVIKCGGSMLERLDSTFFHCIEKLKRKYRIVIVHGGGPDIDKILKKLQIPIEKKHGLRVTSQEVMEVVQMVLCGSTNKNLVQNFQRYGLPAIGISGCDGKLLQAKPLNKKIGYVGEVSKVESSLLEGVLNLNYIPIIAPIGIGEEQVYNINADIAAAGIAAALRVKELIFITDVDGLLYEGKLVKKTDEIEILDMIEKEIITGGMIPKVQAALVALRMGIQSVSIV
type: DOMAIN
name: Asp/Glu/Uridylate_kinase
description: Aspartate/glutamate/uridylate kinase
Protein sequence:
MGIHQLMQFLKEKAPNCFRTLMLDYFAGRTIGCDASMAMYQFLIQTQSAGLTQIIELTDKEGNRTGHLVGLFNRTLQFLENGIKPVWVFDGKPPLLKSGELARRKKLKEEAKVKTELALEQGDMQQALLQNQRTTTISSIMKEDAIKMLQLMGCPVIIAPCEAEAQCAELCRAGKIYATATEDMDALTFRTPVLLRGFNTKKEPIYEIIYDDMIKELELTYEQFVDLCILCGCDYTEKIEGIGPGTAYKLIKEYKSIEGILEHVQKVNAEREKNNQNPKYTVPSKFLYQDSRELFITPLVQKGDELQLTWNKPDVDNLKKFLIEEKGFAESRIDNGLKRIAKKDPAGFQSRLENFFGKTTKIIHPNNSKAKAKSNKKTEQPQKSGGKKKI

Annotated regions:
phrase: QLMGCPVIIAPCEAEAQCAELCRAGKIYATATEDMDALTFRTPVLLRGFNTKKEPIYEIIYDDMIKELE
type: DOMAIN
name: XPG-I_dom
description: XPG-I domain

phrase: MGIHQLMQFLKEKAPNCFRTLMLDYFAGRTIGCDASMAMYQFLIQTQSAGLTQIIELTDKEGNRTGHLVGLFNRTLQFLENGIKPVWVFDGKPPLLKSGELARRKKLKEE
type: DOMAIN
name: XPG_DNA_repair_N
description: XPG, N-terminal

phrase: YEQFVDLCILCGCDYTEKIEGIGPGTAYKLIKE
type: CONSERVED_SITE
name: HhH2
description: Helix-hairpin-helix motif, class 2

phrase: GCPVIIAPCEAEAQCAELCRAGKIYATATEDMDALTFRTPVLLRGFNTKKEPIYEIIYDDMIKELELTYEQFVDLCILCGC
type: DOMAIN
name: XPG-I_dom
description: XPG-I domain

phrase: MGIHQLMQFLKEKAPNCFRTLMLDYFAGRTIGCDASMAMYQFLIQTQSAGLTQIIELTDKEGNRTGHLVGLFNRTLQFLENGIKPVWVFDGKPPLLKSGELARRKKLKE
type: DOMAIN
name: XPG_DNA_repair_N
description: XPG, N-terminal
Protein sequence:
MFLDDTIAAIATAHGEAGIGIVRISGEKALHIIDQVFQSKQGKKLKDISPRRITYGHIIDTERNERIDEVLVSYMKGPHTYTTEDVVEINCHGGMIPVKRILELILRKGARAADAGEFTKRAFLNGRIDLAQAEAVMDLVSAKTDMGFDVALNQLEGSLSKRVKKVKDELLDMLAHIEVSIDFSDEDVDEVTLDLLLKQSMEIEKKIKVLLETADTGKILREGLNTVIVGKPNVGKSSLLNALLKESRAIVTEVPGTTRDAIEEHFNIRGIPLNLIDTAGIRETEDIVEKIGVERSKAFFNKADLIILMLDASRELTPEDLQIMELVKSKKALILVNKTDLTSQIDYDRIIEIVGEKKVIKISLIEESGLEEVEEALVEIVYKGETRAKDSLLVTNVRHKNALERALESLTDGVQAIKQKMPLDFVEVDVKNAWDALGEITGDTVGEDLLDHIFQNFCIGK

Annotated regions:
phrase: GLNTVIVGKPNVGKSSLLNALLKESRAIVTEVPGTTRDAIEEHFNIRGIPLNLIDTAGIRETEDIVEKIGVERSKAFFNKADLIILMLDASRELTPEDLQIMELVKSKKALILVNKTDLTSQIDYDRIIEIVGEKKVIKISLIEESGLEEVEEALVEIV
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain

phrase: REGLNTVIVGKPNVGKSSLLNALLKESRAIVTEVPGTTRDAIEEHFNIRGIPLNLIDTAGIRETEDIVEKIGVERSKAFFNKADLIILMLDASRELTPEDLQIMELVKSKKALILVNKTDLTSQIDYDRIIEIVGEKKVIKI
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain

phrase: DTIAAIATAHGEAGIGIVRISGEKALHIIDQVFQSKQGKKLKDISPRRITYGHIIDTERNERIDEVLVSYMKGPHTYTTEDVVEINCHGGMIPVKRILELILRKGARAADAGEFTKRAFLN
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal

phrase: TVIVGKPNVGKSSLLNALLKESRAIVTEVPGTTRDAIEEHFNIRGIPLNLIDTAGIRETEDIVEKIGVERSKAFFNKADLIILMLDASRELTPEDLQIMELVKSKKALILVN
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: LAQAEAVMDLVSAKTDMGFDVALNQLEGSLSKRVKKVKDELLDMLAHIEVSIDFSDEDVDEVTLDLLLKQSMEIEKKIKVLLETADTGKILREGLNTVIVGKPNVGKSSLLNALLKESRAIVTEVPGTTRDAIEEHFNIRGIPLNLIDTAGIRETEDIVEKIGVERSKAFFNKADLIILMLDASRELTPEDLQIMELVKSKKALILVNKTDLTSQIDYDRIIEIVGEKKVIKISLIEESGLEEVEEALVEIVYKGETRAKDSLLVTNVRHKNALERALESLTDGVQAIKQKMPLDFVEVDVKNAWDALGEITGDTVGEDLLDHIFQNF
type: DOMAIN
name: MnmE_helical
description: MnmE, helical domain

phrase: NTVIVGKPNVGKSSLLNALLKESRAIVTEVPGTTRDAIEEHFNIRGIPLNLIDTAGIRETEDIVEKIGVERSKAFFNKADLIILMLDASRELTPEDLQIMELVKSKKALILVNKTDLTSQIDYDRIIEIVGEKKVIKISLIEESGLEE
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: TIAAIATAHGEAGIGIVRISGEKALHIIDQVFQSKQGKKLKDISPRRITYGHIIDTERNERIDEVLVSYMKGPHTYTTEDVVEINCHGGMIPVKRILELILRKGARAADAGEFTKRAFLNG
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal