nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MAERSAPVGVMDSGVGGLSVLAEIQRLLPNETLLYVADCGHIPYGEKSPDYIRERCRHIAEFFHEQGAKAMVLACNTATVAAVADLRELYPTWPLVGMEPAVKPAAAATRSGVVGVLATTGTLQSAKFAALLDRFANDVQVITQPCPGLVELIETGDLASPALRQMLQGYVQPLLAAGCDTLILGCTHYPFLRPLLAGMVPNDVAIIDTGAAVARQLRRLLGANDLLAKGPAGAARFWTSADPEALRKILPVLWHKSDDVQSFAL

Annotated regions:
phrase: VLACNTAT
type: ACTIVE_SITE
name: Asp/Glu_racemase_AS_1
description: Asp/Glu racemase, active site 1

phrase: LILGCTHYPF
type: ACTIVE_SITE
name: Asp/Glu_racemase_AS_2
description: Asp/Glu racemase, active site 2
Protein sequence:
MQSKEDFIEMRVPASAEYVSLIRLTLSGVFSRAGATYDDIEDAKIAVSEAVTNAVKHAYKENNNVGIINIYFEILEDKIKIVISDKGDSFDYETTKSKIGPYDKDENIDFLREGGLGLFLIESLMDEVTVYKEPGVTISMTKYIKKEQVRNNGERVEIS

Annotated regions:
phrase: VPASAEYVSLIRLTLSGVFSRAGATYDDIEDAKIAVSEAVTNAVKHAYKENNNVGIINIYFEILEDKIKIVISDKGDSFDYETTKSKIGPYDKDENIDFLREGGLGLFLIESLMDEVTVYKEPGVTISMT
type: DOMAIN
name: HATPase_dom
description: Histidine kinase/HSP90-like ATPase domain
Protein sequence:
MVPNPPISLAQGDDLIIGGRRFHSRLFTGTGKYPSMEVMQQSIKRSACEMVTVAVRRVQAVAAGHAGLMEAIDWTRIWMLPNTAGCTNAEEAVRVARLGRELAKLAGQEDNTFVKLEVIPDGRHLLPDPIGTLQAAEQLVNEGFTVLPYINADPLLAKHLEDAGCATVMPLGSPIGSGQGLNNAANIALIIENASVPVVVDAGIGVPSEAAQALEMGADAVLVNSAIALARNPAAMAEAMGQAVIAGRTAFCAGRLPRREEASASSPTTGLVSS

Annotated regions:
phrase: IGGRRFHSRLFTGTGKYPSMEVMQQSIKRSACEMVTVAVRRVQAVAAGHAGLMEAIDWTRIWMLPNTAGCTNAEEAVRVARLGRELAKLAGQEDNTFVKLEVIPDGRHLLPDPIGTLQAAEQLVNEGFTVLPYINADPLLAKHLEDAGCATVMPLGSPIGSGQGLNNAANIALIIENASVPVVVDAGIGVPSEAAQALEMGADAVLVNSAIALARNPAAMAEAMGQAVIAGRTAFCAGRLPRREEASASS
type: DOMAIN
name: Thiazole_synthase_ThiG
description: Thiazole synthase ThiG
Protein sequence:
MADDWESAADSEVVIRPTAAASVNKWEGEDEDEDIKDSWEDEEEKKDEEKPTKTEAPAKPKPNKALKAKLEQQALLEEEAEAKRLANLSPAEKLAEKLRLQKIQEASDLKHAQEAFGVTSTCGGLDAFNPETKEEFKEFGATLSWKVGQFRESEHFPQFVEDLVRSLCVNLSAADIKKVKMNVEILHSEKLKLEKANAKKPAGKGKGKVTLRTENDDIDGYQKYGNDFTEDYDDFM

Annotated regions:
Protein sequence:
MKYVLIQATDNGILRRAECGGAVTALFKYLLDKKLVDGVLALKRGEDVYDGIPTFITNSNELVETAGSLHCAPTNFGKLIAKYLADKKIAVPAKPCDAMAIRELAKLNQINLDNVYMIGLNCGGTISPITAMKMIELFYEVNPLDVVKEEIDKGKFIIELKNGEHKAVKIEELEEKGFGRRKNCQRCEIMIPRMADLACGNWGAEKGWTFVEICSERGRKLVEDAEKDGYIKIKQPSEKAIQVREKIESIMIKLAKKFQKKHLEEEYPSLEKWKKYWNRCIKCYGCRDNCPLCFCVECSLEKDYIEEKGKIPPNPLIFQGIRLSHISQSCINCGQCEDACPMDIPLAYIFHRMQLKIRDTLGYIPGVDNSLPPLFNIER

Annotated regions:
phrase: SCINCGQCEDACPM
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: QATDNGILRRAECGGAVTALFKYLLDKKLVDGVLALKRGEDVYDGIPTFITNSNELVETAGSLHCAPTNFGK
type: DOMAIN
name: Co_F420_Hydgase/DH_bsu_N
description: Coenzyme F420 hydrogenase/dehydrogenase beta subunit, N-terminal

phrase: CINCGQCEDAC
type: CONSERVED_SITE
name: 4Fe4S_Fe_S_CS
description: 4Fe-4S ferredoxin, iron-sulphur binding, conserved site

phrase: IRLSHISQSCINCGQCEDACPMDIPLAYIF
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: KKIAVPAKPCDAMAIRELAKLNQINLDNVYMIGLNCGGTISPITAMKMIELFYEVNPLDVVKEEIDKGKFIIELKNGEHKAVKIEELEEKGFGRRKNCQRCEIMIPRMADLACGNWGAEKGWTFVEICSERGRKLVEDAEKDGYIKIKQPS
type: DOMAIN
name: FrhB_FdhB_C
description: Coenzyme F420 hydrogenase/dehydrogenase beta subunit, C-terminal
Protein sequence:
MTAITDIIAREILDSRGNPTVEVDVLLEDGSFGRAAVPSGASTGAHEAVEMRDGGERYGGKGVLKACDLVEGEIFEAIAGMDAEDQRRIDEAMIELDGTANKSRLGANAMLGVSLAAAHAAADVQGLPLYRYIGGMNARVLPTPMMNIINGGAHADNPIDFQEFMIMPVGLPSFSEALRCGAEVFHALKSRLKADGLNTNVGDEGGFAPHLRSAEQALDVIMDAIEAAGYKPGEDVALALDVASTEFYKDGQYVLEGADESHDAEGFSQYLEKLVNKYPIVSIEDGMAEDDWDGWRALTQRLDGRCQLVGDDLFVTNPERLAKGIETGAANAILVKVNQIGTLSETLDAVDMALRSGYGAVMSHRSGETEDATIADLAVATNCGQIKTGSLARSDRTAKYNQLLRIESLLGETGMFAGPSGLAS

Annotated regions:
phrase: ITDIIAREILDSRGNPTVEVDVLLEDGSFGRAAVPSGASTGAHEAVEMRDGGERYGGKGVLKACDLVEGEIFEAIAGMDAEDQRRIDEAMIELDGTANKSRLGANAMLGVSLAAAHAAADVQGLPLYRY
type: DOMAIN
name: Enolase_N
description: Enolase, N-terminal

phrase: ITDIIAREILDSRGNPTVEVDVLLEDGSFGRAAVPSGASTGAHEAVEMRDGGERYGGKGVLKACDLVEGEIFEAIAGMDAEDQRRIDEAMIELDGTANKSRLGANAMLGVSLAAAHAAADVQGLPLYRY
type: DOMAIN
name: Enolase_N
description: Enolase, N-terminal

phrase: ARVLPTPMMNIINGGAHADNPIDFQEFMIMPVGLPSFSEALRCGAEVFHALKSRLKADGLNTNVGDEGGFAPHLRSAEQALDVIMDAIEAAGYKPGEDVALALDVASTEFYKDGQYVLEGADESHDAEGFSQYLEKLVNKYPIVSIEDGMAEDDWDGWRALTQRLDGRCQLVGDDLFVTNPERLAKGIETGAANAILVKVNQIGTLSETLDAVDMALRSGYGAVMSHRSGETEDATIADLAVATNCGQIKTGSLARSDRTAKYNQLLRIESLLGETGMFAGPSGLA
type: DOMAIN
name: Enolase_C
description: Enolase, C-terminal TIM barrel domain

phrase: RVLPTPMMNIINGGAHADNPIDFQEFMIMPVGLPSFSEALRCGAEVFHALKSRLKADGLNTNVGDEGGFAPHLRSAEQALDVIMDAIEAAGYKPGEDVALALDVASTEFYKDGQYVLEGADESHDAEGFSQYLEKLVNKYPIVSIEDGMAEDDWDGWRALTQRLDGRCQLVGDDLFVTNPERLAKGIETGAANAILVKVNQIGTLSETLDAVDMALRSGYGAVMSHRSGETEDATIADLAVATNCGQIKTGSLARSDRTAKYNQLLRIESLLGETGMFAG
type: DOMAIN
name: Enolase_C
description: Enolase, C-terminal TIM barrel domain

phrase: ILVKVNQIGTLSE
type: CONSERVED_SITE
name: Enolase_CS
description: Enolase, conserved site
Protein sequence:
MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDYYQQIGHEKAQSVIDSITSSYAAEGQAHANPMLPQNQPGGVPPGLGFPPPGAGVPPFPPFPGGMPPPFPGMPGGAPVPPPGAFGAPGVPGGIPPPGAPGARGMPPMPPFPGMPGAPAGIPGVPPPMPGPGGLPFPPPGGLPFPPPGAGNFPFPPPGAPGAFPGMPPFGAPGQGPPGADKR

Annotated regions:
phrase: MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVDY
type: DOMAIN
name: U1-CZ_Znf_C2H2
description: U1-C, C2H2-type zinc finger

phrase: FFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVV
type: DOMAIN
name: Matrin/U1-C_Znf_C2H2
description: Matrin/U1-C, C2H2-type zinc finger

phrase: MPKFFCDYCDVYLTHDSMSVRKAHNSGRNHLRNVVD
type: DOMAIN
name: Matrin/U1-like-C_Znf_C2H2
description: Matrin/U1-C-like, C2H2-type zinc finger
Protein sequence:
MSEALGMNGKDAPVLACRDLHKRFKEGPLDVNVLSGIDLAVAPGEQMAIVGRSGSGKSTLLHLLGGLDRPTRGEVWLAGEALSSLSERRRGWLRNRNLGFVYQFHHLLPEFTALENVAMPGLIGGLAPAQAREQAEMILEQVGLADRTRHKPGELSGGERQRVAIARALVTRPRCILADEPTGNLDSHTAERIFELLSELHQAQGTSLIMVTHDAALARRMDRTLELMDGRFVDER

Annotated regions:
phrase: LACRDLHKRFKEGPLDVNVLSGIDLAVAPGEQMAIVGRSGSGKSTLLHLLGGLDRPTRGEVWLAGEALSSLSERRRGWLRNRNLGFVYQFHHLLPEFTALENVAMPGLIGGLAPAQAREQAEMILEQVGLADRTRHKPGELSGGERQRVAIARALVTRPRCILADEPTGNLDSHTAERIFELLSELHQAQGTSLIMVTHDAALARRMDRTLELMDG
type: DOMAIN
name: MacB-like_ATP-bd
description: MacB-like, ATP-binding domain

phrase: LSGGERQRVAIARA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: PGEQMAIVGRSGSGKSTLLHLLGGLDRPTRGEVWLAGEALSSLSERRRGWLRNRNLGFVYQFHHLLPEFTALENVAMPGLIGGLAPAQAREQAEMILEQVGLADRTRHKPGELSGGERQRVAIARALVTRPRCILADEPTGNLDSHTAERIFELLSELHQAQGTSLIMVTHDAALARRMDRTLELMDG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LSGIDLAVAPGEQMAIVGRSGSGKSTLLHLLGGLDRPTRGEVWLAGEALSSLSERRRGWLRNRNLGFVYQFHHLLPEFTALENVAMPGLIGGLAPAQAREQAEMILEQVGLADRTRHKPGELSGGERQRVAIARALVTRPRCILADEP
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: LACRDLHKRFKEGPLDVNVLSGIDLAVAPGEQMAIVGRSGSGKSTLLHLLGGLDRPTRGEVWLAGEALSSLSERRRGWLRNRNLGFVYQFHHLLPEFTALENVAMPGLIGGLAPAQAREQAEMILEQVGLADRTRHKPGELSGGERQRVAIARALVTRPRCILADEPTGNLDSHTAERIFELLSELHQAQGTSLIMVTHDAALARRMDRTLELMDGRFVDE
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain
Protein sequence:
MSSKTLAKFLEENLEDLKSKGLYNVIDPLESSNGPIITIGGKEYINLSSNNYLGLATDSRLQEAAIGAIHKYGVGAGAVRTINGTLDLHIKLEETIAKFKHTEAAIAYQSGFNCNMAAISAVMDKNDAILSDELNHASIIDGSRLSKAKIIVYKHSDMEDLRQKAIAAKESGLYNKLMVITDGVFSMDGDVAKLPEIVEIAEELDLMTYVDDAHGSGVLGKGAGTVKHFGLSDKVDFQIGTLSKAIGVIGGYVAGKQNLIDWLKVRSRPFLFSTALTPADAAACMRSIEILMESTELHDRLWENGRYLKQGLKELGFNIGESETPITPCIIGDEVLTQEFSKRLNEEGVYAKSIVFPTVAKGTGRVRNMPTAAHTKEMLDEAILKYEKVGKEMGII

Annotated regions:
phrase: TLSKAIGVI
type: BINDING_SITE
name: Aminotrans_II_pyridoxalP_BS
description: Aminotransferase, class-II, pyridoxal-phosphate binding site

phrase: EYINLSSNNYLGLATDSRLQEAAIGAIHKYGVGAGAVRTINGTLDLHIKLEETIAKFKHTEAAIAYQSGFNCNMAAISAVMDKNDAILSDELNHASIIDGSRLSKAKIIVYKHSDMEDLRQKAIAAKESGLYNKLMVITDGVFSMDGDVAKLPEIVEIAEELDLMTYVDDAHGSGVLGKGAGTVKHFGLSDKVDFQIGTLSKAIGVIGGYVAGKQNLIDWLKVRSRPFLFSTALTPADAAACMRSIEILMESTELHDRLWENGRYLKQGLKELGFNIGESETPITPCIIGDEVLTQEFSKRLNEEGVYAKSIVFPTVAKGTGRVRNMPTAAHTKEMLDEA
type: DOMAIN
name: Aminotransferase_I/II_large
description: Aminotransferase, class I/classII, large domain
Protein sequence:
MTILHSTDFFKAGISTVAIEPRLPQSAFPEHHHDFHEIVIVEQGTGIHVFNGQPYTIGGGSVCFIRDHDRHLYEHTDNLCLTNVLYRAPDAFRFLAGVSQLLPQEQEGNYPSHWRVNQTVLQQVRHIVAQMEAMGSETDTHAVASREILFMQLLVLLRKSSLAEEATNNDARLNQLLAWLEDHFAQEICWEEVAAQFSLSLRTLHRQLKQQTGLTPQRYLNRVRLMKARHLLRHSDESVTDIAFRCGFGDSNHFSTLFRREFDWSPRDIRQGRDAILQ

Annotated regions:
phrase: NQLLAWLEDHFAQEICWEEVAAQFSLSLRTLHRQLKQQTGLTPQRYLNRVRLMKARHLLRHSDESVTDIAFRCGFGDSNHFSTLFRREFDWSPRDIRQ
type: DOMAIN
name: HTH_AraC
description: DNA binding HTH domain, AraC-type

phrase: EICWEEVAAQFSLSLRTLHRQLKQQTGLTPQRYLNRVRLMKARHLLRHSDESVTDIAFRCGFGDSNHFSTLFRREFDWSPRDI
type: DOMAIN
name: HTH_AraC
description: DNA binding HTH domain, AraC-type

phrase: TVAIEPRLPQSAFPEHHHDFHEIVIVEQGTGIHVFNGQPYTIGGGSVCFIRDHDRHLYEHTDNLCLTNVLYRAPDAFRFLAGVSQLLPQEQEGNYPSHWRVNQTVLQQVRHIVAQMEAMGSETDTHAVASREILFMQLLVLLRK
type: DOMAIN
name: RhaR_RhaS-like_N
description: HTH-type transcriptional activator RhaR/RhaS, N-terminal domain

phrase: VTDIAFRCGFGDSNH
type: DOMAIN
name: Tscrpt_reg_AraC-type_HTH
description: Transcription regulator HTH, AraC- type, HTH domain

phrase: FSTLFRREFDWSPRDI
type: DOMAIN
name: Tscrpt_reg_AraC-type_HTH
description: Transcription regulator HTH, AraC- type, HTH domain

phrase: TVAIEPRLPQSAFPEHHHDFHEIVIVEQGTGIHVFNGQPYTIGGGSVCFIRDHDRHLYEHTDNLCLTNVLYRAPDAFRFLAGVSQLLPQEQEGNYPSHWRVNQTVLQQVRHIVAQMEAMGSETDTHAVASREILFMQL
type: DOMAIN
name: AraC-bd
description: AraC-type arabinose-binding/dimerisation domain

phrase: AAQFSLSLRTLHRQLKQQTGLTPQRYLNRVRLMKARHLLRHSDESVTDIAFRCGFGDSNHFSTLFRREFDWSPRDIR
type: DOMAIN
name: HTH_AraC
description: DNA binding HTH domain, AraC-type

phrase: RLMKARHLLRHSDESVTDIAFRCGFGDSNHFSTLFRREFDWS
type: CONSERVED_SITE
name: HTH_AraC-typ_CS
description: HTH domain AraC-type, conserved site
Protein sequence:
MKKSIFSKKLLFSFGSLVALAAIPLITISCGQTNTDQSQQPGSGSGSGSGTSNGSGSTPTPEQGNNQGGSTPTPEQGNNQGGSTPTPEQGNNQGGSTPTPEQGNNQGGSTPTPEQGNNQGGSTPTPEQGNNQGGSTPTPEQGNNQGGSTPTPEQGNNQGGSTPTPEQGNSQVSK

Annotated regions:
phrase: SKKLLFSFGSLVALAAIPLITISCGQT
type: DOMAIN
name: VlpA-F-like_signal
description: Variant surface antigen A-F-like, signal domain
Protein sequence:
MSTLDVQTFRDAMACVGAAVNIITTDGPAGQAGFTASAVCSVTDSPPTLLVCLNRGASVWPTFNENRTLCVNTLSAGQEPLSNLFGGKTPMADRFAAARWQTGETGCPRLEDALASFDCRISQVVSVGTHDILFCTIESITRHPAPQGLVWFDRGYHALLRPAC

Annotated regions:
phrase: MACVGAAVNIITTDGPAGQAGFTASAVCSVTDSPPTLLVCLNRGASVWPTFNENRTLCVNTLSAGQEPLSNLFGGKTPMADRFAAARWQTGETGCPRLEDALASFDCRISQVVSVGTHDILFCTIESITRHPAPQGLVWFDRGYH
type: DOMAIN
name: Flavin_Rdtase-like_dom
description: Flavin reductase like domain

phrase: MACVGAAVNIITTDGPAGQAGFTASAVCSVTDSPPTLLVCLNRGASVWPTFNENRTLCVNTLSAGQEPLSNLFGGKTPMADRFAAARWQTGETGCPRLEDALASFDCRISQVVSVGTHDILFCTIESITRHPAPQGLVWFDRGYHA
type: DOMAIN
name: Flavin_Rdtase-like_dom
description: Flavin reductase like domain
Protein sequence:
MESQQLSNYPQISHGSACASVTSKEVHTNQDPLDVSASKTEECEKASTKANSQQTTTPASSAVPENPHHASPQPASVPPPQNGPYPQQCMMTQNQANPSGWSFYGHPSMIPYTPYQMSPMYFPPGPQSQFPQYPSSVGTPLSTPSPESGNTFTDSSSADSDMTSTKKYVRPPPMLTSPNDFPNWVKTYIKFLQNSNLGGIIPTVNGKPVRQITDDELTFLYNTFQIFAPSQFLPTWVKDILSVDYTDIMKILSKSIEKMQSDTQEANDIVTLANLQYNGSTPADAFETKVTNIINRLNNNGIHINNKVACQLIMRGLSGEYKFLRYTRHRHLNMTVAELFLDIHAIYEEQQGSRNSKPNYRRNLSDEKNDSRSYTNTTKPKVIARNPQKTNNSKSKTARAHNVSTSNNSPSTDNDSISKSTTEPIQLNNKHDLHLGQELTESTVNHTNHSDDELPGHLLLDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVLHTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNISVPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQCPDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSARQHAGLAGLDISTLLPFGQPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRLDQFNYDALTFDEDLNRLTASYQSFIASNEIQQSDDLNIESDHDFQSDIELHPEQPRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIRAPREVDPNISESNILPSKKRSSTPQISNIESTGSGGMHKLNVPLLAPMSQSNTHESSHASKSKDFRHSDSYSENETNHTNVPISSTGGTNNKTVPQISDQETEKRIIHRSPSIDASPPENNSSHNIVPIKTPTTVSEQNTEESIIADLPLPDLPPESPTEFPDPFKELPPINSHQTNSSLGGIGDSNAYTTINSKKRSLEDNETEIKVSRDTWNTKNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIKEKEKYIEAYHKEVNQLLKMKTWDTDEYYDRKEIDPKRVINSMFIFNKKRDGTHKARFVARGDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMNDKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFKNSQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQDELEIDEDEYKEKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKPTEPDNKLVAISDASYGNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNNLSYLIQELNKKPIIKGLLTDSRSTISIIKSTNEEKFRNRFFGTKAMRLRDEVSGNNLYVYYIETKKNIADVMTKPLPIKTFKLLTNKWIH

Annotated regions:
phrase: LLLDSGASRTL
type: ACTIVE_SITE
name: Aspartic_peptidase_AS
description: Aspartic peptidase, active site

phrase: NSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSARQHAGLAGLDISTLL
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: EPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTT
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: KRVINSMFIFNKKRDGTHKARFVARGDIQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMNDKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFKNSQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRGKYMKLGME
type: DOMAIN
name: RVT_2
description: Reverse transcriptase, RNA-dependent DNA polymerase
Protein sequence:
MLEQILATKREELDTLTLPEPLPEPKRRPFAAALRRPRRALGLIAEVKKASPSKGIIRPDFDPVAIAKAYERAGADAISVLTDERYFQGHRRYLQEVKEAVNIPVLRKDFIIDRRQVEESARLGADAILLIGEALSPEMLEALYQEAYSIGLECLVEVHAKETLERILARFTPEVVGINNRDLHTFVTTLEATKALASLIPPSSVIVSESGISSYRDVRTIRSYGVQAMLVGESLMRQADVERAVYRLFGEDDGNGSS

Annotated regions:
phrase: GLIAEVKKASPSKGIIRPDFDPVAIAKAYERAGADAISVLTDERYFQGHRRYLQEVKEAVNIPVLRKDFIIDRRQVEESARLGADAILLIGEALSPEMLEALYQEAYSIGLECLVEVHAKETLERILARFTPEVVGINNRDLHTFVTTLEATKALASLIPPSSVIVSESGISSYRDVRTIRSYGVQAMLVGESLMRQADVERAVYR
type: DOMAIN
name: Indole-3-glycerol_P_synth_dom
description: Indole-3-glycerol phosphate synthase domain

phrase: MLEQILATKREELDTLTLPEPLPEPKRRPFAAALRRPRRALGLIAEVKKASPSKGIIRPDFDPVAIAKAYERAGADAISVLTDERYFQGHRRYLQEVKEAVNIPVLRKDFIIDRRQVEESARLGADAILLIGEALSPEMLEALYQEAYSIGLECLVEVHAKETLERILARFTPEVVGINNRDLHTFVTTLEATKALASLIPPSSVIVSESGISSYRDVRTIRSYGVQAMLVGESLMRQADVERAVYRLF
type: DOMAIN
name: Indole-3-glycerol_P_synth_dom
description: Indole-3-glycerol phosphate synthase domain

phrase: EQILATKREELDTLTLPEPLPEPKRRPFAAALRRPRRALGLIAEVKKASPSKGIIRPDFDPVAIAKAYERAGADAISVLTDERYFQGHRRYLQEVKEAVNIPVLRKDFIIDRRQVEESARLGADAILLIGEALSPEMLEALYQEAYSIGLECLVEVHAKETLERILARFTPEVVGINNRDLHTFVTTLEATKALASLIPPSSVIVSESGISSYRDVRTIRSYGVQAMLVGESLMRQADVERAVY
type: DOMAIN
name: Indole-3-glycerol_P_synth_dom
description: Indole-3-glycerol phosphate synthase domain

phrase: LIAEVKKASPSKGIIRPD
type: CONSERVED_SITE
name: Indole-3-GlycerolPSynthase_CS
description: Indole-3-glycerol phosphate synthase, conserved site
Protein sequence:
MAKPLTDQEKRRQISIRGIVGVENVAELKKGFNRHLHFTLVKDRNVATPRDYFFALAHTVRDHLVGRWIRTQQYYYEKCPKRVYYLSLEFYMGRTLQNTMINLGLQNACDEAIYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEYGIFNQKIRDGWQIEEADDWLRHGNPWEKARPEFMLPVHFYGRVEHTEAGTKWIDTQVVLALPYDTPVPGYLNNTVNTMRLWSARAPNDFNLRDFNVGDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDVIRRFKASKFDSSNSAETAFDAFPDQVAIQLNDTHPALAIPELMRIFVDIEKLPWSKAWEITQKTFAYTNHTVLPEALERWPVELVENLLPRHLQIIYEINQKHLDKIAALFPKDVDRLRRMSLIEEEGVKRINMAHLCIVGSHAVNGVAKIHSDIVKTQVFKDFSELEPDKFQNKTNGITPRRWLLLCNPGLAELIAEKIGEDYVKDLSQLTKLNSFLGDDIFLREISNVKQENKLKFSQFLEKEYKVKINPSSMFDVQVKRIHEYKRQLLNCLHVVTMYNRIKKDPKKLFVPRTVIIGGKAAPGYYMAKLIIKLITSVAEVVNNDPMVGSKLKLIFLENYRVSLAEKVIPATDLSEQISTAGTEASGTGNMKFMQNGALTIGTMDGANVEMAEEAGEENLFIFGMRVEDVAALDKKGYEAKEYYEALPELKLAIDQIDKGFFSPKQPDLFKDLVNMLFYHDRFKVFADYEAYVKCQEKVSQLYMNPKAWNIMVLKNIAASGKFSSDRTIKEYARDIWNMEPSDIKISLSGEPSGGANKANGK

Annotated regions:
Protein sequence:
MIPGNRMLMVVLLCQVLLGGASHASLIPETGKKKVAEIQGHAGGRRSGQSHELLRDFEATLLQMFGLRRHPQPSKSAVIPDYMRDLYRLQSGEEEEEEQMPSGGLEYPERPASRANTVRSFHHEEHLENIPGTSENSAFRFLFNLSSIPENEAISSAELRLFREQVDQGPDWERGFHRINIYEVMKPPAEAVPGHLITRLLDTRLVHHNVTRWETFDVSPAVLRWTREKQPNHGLAVEVTHFHHTRTHQGQHVRLSRSLLQGSGDWAQFRPLLVTFGHDGRGHALTRRRRAKRSLKHHPQRARKKNKNCRRHALYVDFSDVGWNDWIVAPPGYQAFYCHGDCPFPLADHFNSTNHAIVQTLVNSVNSSIPKACCVPTELSAISMLYLDEYDKVVLKNYQEMVVEGCGCR

Annotated regions:
phrase: NCRRHALYVDFSDVGWNDWIVAPPGYQAFYCHGDCPFPLADHFNSTNHAIVQTLVNSVNSSIPKACCVPTELSAISMLYLDEYDKVVLKNYQEMVVEGCG
type: DOMAIN
name: TGF-b_C
description: Transforming growth factor-beta, C-terminal

phrase: CRRHALYVDFSDVGWNDWIVAPPGYQAFYCHGDCPFPLADHFNSTNHAIVQTLVNSVNSSIPKACCVPTELSAISMLYLDEYDKVVLKNYQEMVVEGCGC
type: DOMAIN
name: TGF-b_C
description: Transforming growth factor-beta, C-terminal

phrase: ELLRDFEATLLQMFGLRRHPQPSKSAVIPDYMRDLYRLQSGEEEEEEQMPSGGLEYPERPASRANTVRSFHHEEHLENIPGTSENSAFRFLFNLSSIPENEAISSAELRLFREQVDQGPDWERGFHRINIYEVMKPPAEAVPGHLITRLLDTRLVHHNVTRWETFDVSPAVLRWTREKQPNHGLAVEVTHFHHTRTHQGQHVRLSRSLLQGSGDWAQFRPLLVT
type: DOMAIN
name: TGF-b_propeptide
description: TGF-beta, propeptide

phrase: RRRRAKRSLKHHPQRARKKNKNCRRHALYVDFSDVGWNDWIVAPPGYQAFYCHGDCPFPLADHFNSTNHAIVQTLVNSVNSSIPKACCVPTELSAISMLYLDEYDKVVLKNYQEMVVEGCGC
type: DOMAIN
name: TGF-b_C
description: Transforming growth factor-beta, C-terminal

phrase: RKKNKNCRRHALYVDFSDVGWNDWIVAPPGYQAFYCHGDCPFPLADHFNSTNHAIVQTLVNSVNSSIPKACCVPTELSAISMLYLDEYDKVVLKNYQEMVVEGCGC
type: DOMAIN
name: BMP4_TGF_beta-like
description: Bone morphogenetic protein 4, TGF-beta-like domain

phrase: IVAPPGYQAFYCHGD
type: CONSERVED_SITE
name: TGFb_CS
description: Transforming growth factor beta, conserved site
Protein sequence:
MAKKVFVKTFGCQMNEYDSDKMVDVLNAAQGYEPTQDVEEADLILFNTCSVREKAQEKVFSDLGRIKHLKARGVKIGVGGCVASQEGDEIIKRAPYVDVVFGPQTLHRLPELLAQREALARPQVDISFPEIEKFDHLPPARVEGASAFVSIMEGCSKYCSYCVVPYTRGEEVSRPFDDVLVEVAGLADQGVKEVTLLGQNVNAYLGKMGGTAEVADFALLLEYVADITGIERIRFTTSHPNEFTQRLIDAYARIPKLVSHLHLPVQHGSDRILMAMKRGYTAMEYKSTIRKLRAIRPDLAMSSDFIVGFPGETEDDFGKMMKLIDDIHFDNSFSFIFSPRPGTPAASLHDDTPHEVKLRRLQELQAVINANIKSISESRVGTVQRILVEGASKRDGSELMGRTECNRVVNFAGHPRLVGQMVDVTITEAKAYTLRGEVVTADHGALAAH

Annotated regions:
phrase: VSIMEGCSKYCSYCVVPYTRGEEVSRPFDDVLVEVAGLADQGVKEVTLLGQNVNAYLGKMGGTAEVADFALLLEYVADITGIERIRFTTSHPNEFTQRLIDAYARIPKLVSHLHLPVQHGSDRILMAMKRGYTAMEYKSTIRKLRAIRPDLAMSSDFIVGFPGETEDDFGKMMKL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: RVEGASAFVSIMEGCSKYCSYCVVPYTRGEEVSRPFDDVLVEVAGLADQGVKEVTLLGQNVNAYLGKMGGTAEVADFALLLEYVADITGIERIRFTTSHPNEFTQRLIDAYARIPKLVSHLHLPVQHGSDRILMAMKRGYTAMEYKSTIRKLRAIRPDLAMSSDFIVGFPGETEDDFGKMMKLIDDIHFDNSFSFIFSPRPGTPAASLHDDTPHEVKLRRLQELQAVINANIKSI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: ASAFVSIMEGCSKYCSYCVVPYTRGEEVSRPFDDVLVEVAGLADQGVKEVTLLGQNVNAYLGKMGGTAEVADFALLLEYVADITGIERIRFTTSHPNEFTQRLIDAYARIPKLVSHLHLPVQHGSDRILMAMKRGYTAMEYKSTIRKLRAIRPDLAMSSDFIVGFPGETEDDFGKMMKLIDDIHFDNSFSFIFSPRPGTPAASLHDDTPHEVKLRRLQELQ
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: ESRVGTVQRILVEGASKRDGSELMGRTECNRVVNFAGHPRLVGQMVDVTITEAKAYTLRGEVV
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: KVFVKTFGCQMNEYDSDKMVDVLNAAQGYEPTQDVEEADLILFNTCSVREKAQEKVFSDLGRIKHLKARGVKIGVGGCVASQEGDEIIKRAPYVDVVF
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: VSIMEGCSKYCSYCVVPYTR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: KKVFVKTFGCQMNEYDSDKMVDVLNAAQGYEPTQDVEEADLILFNTCSVREKAQEKVFSDLGRIKHLKARGVKIGVGGCVASQEGDEIIKRAPYVDVVFGPQTLHRLPELLAQRE
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: SRVGTVQRILVEGASKRDGSELMGRTECNRVVNFAGHPRLVGQMVDVTITEAKAYTLRGEV
type: DOMAIN
name: TRAM_dom
description: TRAM domain
Protein sequence:
MITLKKTLSILKEDGNFREIIDAEHYLNNYPDFTFSHVSYDSRDVSDSTLFFAKGLNFKKEFLTTAVQKGLPFYIAQRDYQVGIPAIIVNDIKNAMSLVAKEFYGNPQDKLKTLAFTGTKGKTTAAYFAYYILQQSHRPAMLSTMNTTLDGKTFFKSKLTTPESLDLFKMMAQAADNGMTHLIMEVSSQAYLVKRVYGLTFDVGVFLNISPDHIGPIEHPTFEDYFYHKRLLLKNSRYAVVNSQMDYFTLVQDQVASQPHDFYGKYSDNQITNSEAFSFDLTGKLAGHYDIQLIGSFNQENALAAGLACLQLGASPSDIQKGIAQTRVPGRMEVLTQKNGAKVFVDYAHNGDSLEKLLSVVEEHQRGKLILILGAPGNKGESRRKDFGRIINQHPDLTVILTADDPNNEDPFDICQEIASYIKRPVAIIVDRKQAIQKAMSLTQTKNDAVIAAGKGADAFQIVKGRRADYAGDIEIAKTYL

Annotated regions:
phrase: GRMEVLTQKNGAKVFVDYAHNGDSLEKLLSVVEEHQRGKLILILGAPGNKGESRRKDFGRIINQHPDLTVILTADDPNNEDPFDICQEIASYIKRPVAIIVDRKQAIQKAMSLTQTKNDAVIAAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: TGTKGKTTAAYFAYYILQQSHRPAMLSTMNTTLDGKTFFKSKLTTPESLDLFKMMAQAADNGMTHLIMEVSSQAYLVKRVYGLTFDVGVFLNISPDHIGPIEHPTFEDYFYHKRLLLKNSRYAVVNSQMDYFTLVQDQVASQPHDFYGKYSDNQITNSEAFSFDLTGKLAGHYDIQLIGSFNQENALAAGL
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central
Protein sequence:
MAKEISSELLNTILTRVGGPGNIASCGNCMTRLRLGVHDSSLVDPDIKTLEGVKGVILTSDQVQVVFGPGKAHRAAKAMSELLGEAPVQDAAEIAAQNKRQLKAKQTSGVQQFLAKFATIFTPLIPGFIAAGLLLGIATLIATVMHVPADAQGTLPDALNFMKVFSKGLFTFLVILVGYNAAQAFGGTGVNGAIIAALFLLGYNPAATTGYYAGFHDFFGLPIDPRGNIIGVLIAAWACARIEGMVRRFMPDDLDMLLTSLITLLITATLAYLIIMPLGGWLFEGMSWLFMHLNSNPLGCAVLAGLFLIAVVFGVHQGFIPVYLALMDSQGFNSLFPILSMAGAGQVGAALALYWRAQPHSALRSQVRGAIIPGLLGVGEPLIYGVTLPRMKPFITACLGGAAGGLFIGLIAWWGLPMGLNSAFGPSGLVALPLMTSAQGILPAMAVYAGGILVAWVCGFIFTTLFGCRNVNLD

Annotated regions:
phrase: ILTRVGGPGNIASCGNCMTRLRLGVHDSSLV
type: CONSERVED_SITE
name: PTrfase_EIIB_Cys
description: Phosphotransferase system EIIB, cysteine phosphorylation site

phrase: IFTPLIPGFIAAGLLLGIATLIATVMHVPADAQGTLPDALNFMKVFSKGLFTFLVILVGYNAAQAFGGTGVNGAIIAALFLLGYNPAATTGYYAGFHDFFGLPIDPRGNIIGVLIAAWACARIEGMVRRFMPDDLDMLLTSLITLLITATLAYLIIMPLGGWLFEGMSWLFMHLNSNPLGCAVLAGLFLIAVVFGVHQGFIPVYLALMDSQGFNSLFPILSMAGAGQVGAALALYWRAQPHSALRSQVRGAIIPGLLGVGEPLIYGVTLPRMKPFITACLG
type: DOMAIN
name: PTS_EIIC
description: Phosphotransferase system, EIIC

phrase: SELLNTILTRVGGPGNIASCGNCMTRLRLGVHDSSLVDPDIKTLEGVKGVILTSDQVQVVFGPGKAHRAAKAMSELLGEAPV
type: DOMAIN
name: PTS_IIB_1
description: Phosphotransferase system, IIB component, type 1

phrase: NIASCGNCMTRLRLGVH
type: CONSERVED_SITE
name: PTrfase_EIIB_Cys
description: Phosphotransferase system EIIB, cysteine phosphorylation site

phrase: SELLNTILTRVGGPGNIASCGNCMTRLRLGVHDSSLVDPDIKTLEGVKGVILTSDQVQVVFGPGKAHRAAKAMSEL
type: CONSERVED_SITE
name: PTrfase_EIIB_Cys
description: Phosphotransferase system EIIB, cysteine phosphorylation site

phrase: AKFATIFTPLIPGFIAAGLLLGIATLIATVMHVPADAQGTLPDALNFMKVFSKGLFTFLVILVGYNAAQAFGGTGVNGAIIAALFLLGYNPAATTGYYAGFHDFFGLPIDPRGNIIGVLIAAWACARIEGMVRRFMPDDLDMLLTSLITLLITATLAYLIIMPLGGWLFEGMSWLFMHLNSNPLGCAVLAGLFLIAVVFGVHQGFIPVYLALMDSQGFNSLFPILSMAGAGQVGAALALYWRAQPHSALRSQVRGAIIPGLLGVGEPLIYGVTLPRMKPFITACLGGAAGGLFIGLIAWWGLPMGLNSAFGPSGLVALPLMTSAQGILPAMAVYAGGILVAWVCGFIFTTLFGCRNVNL
type: DOMAIN
name: PTS_EIIC_1
description: Phosphotransferase system, EIIC component, type 1
Protein sequence:
MEKFKEIMDANQMRRALVRISHEILEKNKGVENLCLVGIQRRGVNLAKRIQENIEKIEGVKLPLGILDITFYRDDLSLLSEHPTVNSTRIDFDINNKKIVLVDDVLFTGRTVRAAIEALMDMGRPKMIQLAVLIDRGHRELPIRADYVGKNVPTSRKEIVHVLVDEFDNDNRVIIEQLDREI

Annotated regions:
phrase: KNKGVENLCLVGIQRRGVNLAKRIQENIEKIEGVKLPLGILDITFYRDDLSLLSEHPTVNSTRIDFDINNKKIVLVDDVLFTGRTVRAAIEALMDMGRPKMIQLAVLIDRGHRELPIRADYV
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: KEIMDANQMRRALVRISHEILEKNKGVENLCLVGIQRRGVNLAKRIQENIEKIEGVKLPLGILDITFYRDDLSLLSEHPTVNSTRIDFDINNKKIVLVDDVLFTGRTVRAAIEALMDMGRPKMIQLAVLIDRGHRELPIRADYVGKNV
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain
Protein sequence:
MIQKETNLKPIDKCGVWSVRAFHLYGGSFRNQSTISNFLKVSVKKTRANNWVPKKTKLKAIIVTLKKELKKIDGSYIKFRTNNVVLLKKRLTPKGKILMGPVSSNLRRKRFLTSFCGSI

Annotated regions:
phrase: AIIVTLKKELKKIDGSYIKFRTNNVV
type: CONSERVED_SITE
name: Ribosomal_uL14_CS
description: Large ribosomal subunit protein uL14, conserved site