nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MDEVNIIDINDTTEQSLVGNEGTANGVVVLISSEGEREGPPASDPIHYSLARSLSDSVGQRNVEDDDVVLLENSVSVSFSLEVEGRFQNDTAIESDNEPASQPQTQTFKRSQSRLLDEIENSGLSISALSDDEEASPLVSNQRSVIHKNIESEVKSGKYIIPLPQSSPLEKMSQVFNYQLASSPTPNKSPSSRSTLPVKSPLQLSTTVANKRSYREVQPPKFDPYLTRKLKKPQNKATADVSSVALDLTKYMEDCHDLYGTLVSDTHIRQQRSLDTKTNSYHSESNYEHDSIVIESDEDDDITNTRQEKPLFVQHSSQSTPVSSNKLALRQPRHVEDEKIDKVKPMVNARPFTDQEYSEMVKKCLGTSEMRKLYNECNKVSRTEETIYNEMILTVNNKVMELIHSKHISFEEELKPLTIIQNYEEFPIIRFKRKCRSIYDQTHGVFYPCDEVIANESICVLVYEALPFFHRYRTDKRGLWDEIRQFSKNGMKVIVVMYGLNALRKKLCNMENRQHEDRVLEQLSGSASSQSQSKTRRRSTQETKMRELNIKSKNLDRIINEVTIYANVDVFPIENLNEFSHWMKNLVWVVGKMRYDVSVKYKEWSHLNVKSGKSPTDVLYSFLQQVAHVNEPKAKRVVTHYKSFQSMMNDMKAGYVAQSHDNKPLMPKSLERALHTLYTSDDPNELIFTD

Annotated regions:
phrase: ELIHSKHISFEEELKPLTIIQNYEEFPIIRFKRKCRSIYDQTHGVFYPCDEVIANESICVLVYEALPFFHRYRTDKRGLWDEIRQFSKNGMKVIVVMYGLNALRKKLCNMENRQHEDRVLEQLSGSASSQSQSKTRRRSTQETKMRELNIKSKNLDRIINEVTIYANVDVFPIENLNEFSHWMKNLVWVVGKMRYDVSVKYKEWSHLNVKSGKSPTDVLYSFLQQVAHVNEPKAKRVVTHYKSFQSMMNDM
type: DOMAIN
name: ERCC4_domain
description: ERCC4 domain

phrase: RSIYDQTHGVFYPCDEVIANESICVLVYEALPFFHRYRTDKRGLWDEIRQFSKNGMKVIVVMYGLNALRKKLCNMENRQHEDRVLEQLSGSASSQSQSKTRRRSTQETKMRELNIKSKNLDRIINEVTIYANVDVFPIENLNEFSHWMKN
type: DOMAIN
name: ERCC4_domain
description: ERCC4 domain

phrase: NECNKVSRTEETIYNEMILTVNNKVMELIHSKHISFEEELKPLTIIQNYEEFPIIRFKRKCRSIYDQTHGVFYPCDEVIANESICVLVYEALPFFHRYRTDKRGLWDEIRQFSKNGMKVIVVMYGLNALRKKLCNMENRQHEDRVLEQLSGSASSQSQSKTRRRSTQETKMRELNIKSKNLDRIINEVTIYANVDVFPIENLNEFSHWMKNLVWVVGKMRY
type: DOMAIN
name: XPF_nuclease_EME1_ascomycetes
description: Crossover junction endonuclease EME1, XPF-like nuclease domain, ascomycetes
Protein sequence:
VFLSMRNKTQLAKRRATNYETHRNSSRTSSPIVCSTGMPIIFVATEVHPWCKTGGLGDVVGGLPPALAAMGHRVMTIAPRYDQYKDTWDTNVLVEVIVGDRTETVRFFHCYKRGVDRVFVDHPMFLEKVWGKTGSKLYGPTTGTDFRDNQLRFCLLCLAALEAPRVLNLNNSEYFSGPYGENVVFVANDWHTAVLPCYLKSMYKQNGIYENAKVAFCIHNIAYQGRFPRADFELLNLPESFMPSFDFVDGHVKPVVGRKINWMKAGITECDVVLTVSPHYVKELTSGPEKGVELDGVLRTKPLETGIVNGMDVIDWNPATDKYISVKYNATTVAQARALNKEILQAEVGLSVDSSIPVIVFIGRLEEQKGSDILIAASPEFVEENVQIIVLGTGKKKMEEELMLLEVKYPQNARGIAKFNVPLAHMMFAGADFIIIPSRFEPCGLIQLQGMSYGVVPICSSTGGLVDTVREGVTGFHMGSFNVEFETVDPTDVAAVGSNVTRALKQYRTPVFHAMVQNCMAQDLSWKGPAKKWEEALLSLGVEGSQPGIEGEEIAPLAKQNVATP

Annotated regions:
phrase: IIFVATEVHPWCKTGGLGDVVGGLPPALAAMGHRVMTIAPRYDQYKDTWDTNVLVEVIVGDRTETVRFFHCYKRGVDRVFVDHPMFLEKVWGKTGSKLYGPTTGTDFRDNQLRFCLLCLAALEAPRVLNLNNSEYFSGPYGENVVFVANDWHTAVLPCYLKSMYKQNGIYENAKVAFCIHNIAYQGRFPRADFELLNLPESFMPSFDFVDGHVKPVVGRKINWMKAGITECDVVLTVSPHYVKELTSGPEKGVELDGVL
type: DOMAIN
name: Starch_synth_cat_dom
description: Starch synthase, catalytic domain

phrase: PVIVFIGRLEEQKGSDILIAASPEFVEENVQIIVLGTGKKKMEEELMLLEVKYPQNARGIAKFNVPLAHMMFAGADFIIIPSRFEPCGLIQLQGMSYGVVPICSSTGGLVDTVREGVTGFHMGSFN
type: DOMAIN
name: Glyco_trans_1
description: Glycosyl transferase, family 1
Protein sequence:
MNNIKITIQYDGTDFYGWQIQPNLRTVQGEIYKAVQKVYGEKITIYGCGRTDAGVHALGQVANFRVPKMLVPINKVHIALNSYLDRDLRIIKAEEMPDSFNARASATFREYLYIVHNSSTSFPFYERYAWFYRKNVIDEKLINEYARYLIGEHNFTSFCSTEDENDSKFRYLERVKAIRKGDTIYFIIRGNAFLHNMVRIIVGTLVEGQKKKKPINFIEDILKSEDRAKAFVTAPAHGLYFRRAFFKDE

Annotated regions:
phrase: IQYDGTDFYGWQIQPNLRTVQGEIYKAVQKVYGEKITIYGCGRTDAGVHALGQVANFRVPKMLVPINKVHIALNSYLDRDLRIIKAEEMPDSF
type: DOMAIN
name: PsdUridine_synth_TruA_a/b_dom
description: Pseudouridine synthase I, TruA, alpha/beta domain

phrase: ARYLIGEHNFTSFCSTEDENDSKFRYLERVKAIRKGDTIYFIIRGNAFLHNMVRIIVGTLVEGQKKKKPINFIEDILKSEDRAKAFVTAPAHGLYFRRAF
type: DOMAIN
name: PsdUridine_synth_TruA_a/b_dom
description: Pseudouridine synthase I, TruA, alpha/beta domain
Protein sequence:
MNNDVFPNKFKAALAAKQVQIGCWSALSNPISTEVLGLAGFDWLVLDGEHAPNDISTFIPQLMALKGSASAPVVRVPTNEPVIIKRLLDIGFYNFLIPFVETKEEAEQAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVDNVDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQKTIQHIFNRASAHGKPSGILAPVEADARRYLEWGATFVAVGSDLGVFRSATQKLADTFKK

Annotated regions:
phrase: QIGCWSALSNPISTEVLGLAGFDWLVLDGEHAPNDISTFIPQLMALKGSASAPVVRVPTNEPVIIKRLLDIGFYNFLIPFVETKEEAEQAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVDNVDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQKTIQHIFNRASAHGKPSGILAPVEADARRYLEWGATFVAVGSDLGVFR
type: DOMAIN
name: Aldolase/citrate-lyase_domain
description: HpcH/HpaI aldolase/citrate lyase domain
Protein sequence:
MRYLVTLLLSLAVLVTAGCGWHLRSTTQVPASMKTMILDSGDPNGPLSRAVRNQLRLNNVNLLDKDTTRKDVPSLRLGTVTILQDTASVFQDGQTAEYQMVMTVNASVLIPGHDIYPISTKVYRSFFDNPQMALAKDNEQAMIVQEMYDKAAEQLIRKLTSVRAADIQATKEEATADNETAAPASTPARVSTTLSN

Annotated regions:
Protein sequence:
MRSVGNVDLTIGLVTVPVKMVGVSESHDRKASMYHPHEDGNFGKIKMPKLCEDCGEVVPTADIAKGFEEGGDIVILTADELASIAAATGAALEVPQFVKAEQINPMLFANENIYRLVPDPKRGRQAATTYLMVRHILVSQELVGVVQYTRWGRNRLGVLDVEPSDDGGVLVIRNMMWADELRSTEGIVPTNVTEDDIDPRLLPVMASVVESMTGDWDPTAYTDRYTEQLSEAITAKAQGDEIATVASESGKAIDDVSDLLAKLEASIQKKAPAKKATARRKKTA

Annotated regions:
phrase: IGLVTVPVKMVGVSESHDRKASMYHPHEDGNFGKIKMPKLCEDCGEVVPTADIAKGFEEGGDIVILTADELASIAAATGAALEVPQFVKAEQINPMLFANENIYRLVPDPKRGRQAATTYLMVRHILVSQELVGVVQYTRWGRNRLGVLDVEPSDDGGVLVIRNMMWADELRSTEGIVPTNVTEDD
type: DOMAIN
name: Ku70/Ku80_beta-barrel_dom
description: Ku70/Ku80 beta-barrel domain

phrase: GEVVPTADIAKGFEEGGDIVILTADELASIAAATGAALEVPQFVKAEQINPMLFANENIYRLVPDPKRGRQAATTYLMVRHILVSQELVGVVQYTRWGRNRLGVLDVEPSDDGGVLVIRNMMWADELRSTEGIVPTN
type: DOMAIN
name: Ku70/Ku80_beta-barrel_dom
description: Ku70/Ku80 beta-barrel domain
Protein sequence:
MEFKISGYTRLVGLLGYPVRHSLSPLMHNMAFQHLGLDYVYLVFEVKEDNLKEAVDAMKTLDVAGFNVTMPNKQKIIPLLDEISEEARLIGSVNTVVNKNGHLKGYNTDGKGYVMGLADEGISPEGKTIVIAGAGGASKSVAIQLALEGAKEITILNRTVEAAEEICNIINKNIPTCKTSATGYEDNELKQQLKEADLFINCTNLGMGSHEEKSIISSTDILHPDLIVSDVVYAPPKTKLLHMAEEVGCKTINGLGMIIGQGALAFKLWTGEDMPIEYIKRIILSK

Annotated regions:
phrase: LLGYPVRHSLSPLMHNMAFQHLGLDYVYLVFEVKEDNLKEAVDAMKTLDVAGFNVTMPNKQKIIPLLDEISEEARLIGSVNT
type: DOMAIN
name: Shikimate_DH-bd_N
description: Shikimate dehydrogenase substrate binding, N-terminal

phrase: GLGMIIGQGALAFKLWTGEDMPIEYIKRI
type: DOMAIN
name: SDH_C
description: SDH, C-terminal

phrase: EGKTIVIAGAGGASKSVAIQLALEGAKEITILNRTVEAAEEICNIINKNIPTCKTSATGYEDNELKQQLKEADLFINCT
type: DOMAIN
name: Shikm_DH/Glu-tRNA_Rdtase
description: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase
Protein sequence:
MTITELWALIPLLILACGSVFVLMLGAIVPGRCGTVIGVAVCAGTALWAMLAPPQPLAPPTLGVTVTPFTRFFLVFFAVTAGLSLLLARDHAARQGLKGEEYPATILFGTFGMGVVASAANFLTLFLGLEALTFAFYILVAYDHNRPASGEAGLKYLLMGAVSAAFVAFGIALLYGATGTLEISRAVAASAAGGGIALAGWGLLLAGLAFKISLAPAHLWTPDIYQGGPTPVVAFLASGSKGAAIALFLLILSPLGTLGTLRAPLWGLAFLSMTVGNLAALLQPNVKRMLAYSSVAQMGYVALALLSGGRGYEAAAFYAVAYGAMVLAAFGALASLEGETPLEQVDDLRGLGYHRPFQGVVLAVAMLALAGIPPTVGFVGKFAIFFAALKGGEAPLAVIGILTAAASAYYYLRVVVNLYMKPADETGSGQRPTVAEALSLGIAALAIFILGIWPGPLFDLAAAILR

Annotated regions:
phrase: AANFLTLFLGLEALTFAFYILVAYDHNRPASGEAGLKYLLMGAVSAAFVAFGIALLYGATGTLEISRAVAASAAGGGIALAGWGLLLAGLAFKISLAPAHLWTPDIYQGGPTPVVAFLASGSKGAAIALFLLILSPLGTLGTLRAPLWGLAFLSMTVGNLAALLQPNVKRMLAYSSVAQMGYVALALLSGGRGYEAAAFYAVAYGAMVLAAFGALASLEGETPLEQVDDLRGLGYHRPFQGVVLAVAMLALAGIPPTVGFVGKFAIFFAALKGGEAPLAVIGILT
type: DOMAIN
name: ND/Mrp_TM
description: NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domain
Protein sequence:
MIERLILFNFQSDKNTKHTRVRNMLLRRAAAALPARKTPLHCYRRLGGSYRALSGSLLLRDEEKRLPHRVQDERDEAKADTDLAADGDSAATKPWYLNIVERPAQNMPLHQQEIVFPANSPKSLETIATFLRDKLGLSDVLIFDLRDSQDEQVTAASKISDFMVMATAKSGRHGHKSFIELNTLLKQEFKTVGQVEGNISANELRRRQKRLARHTNLSKSMGSRTATTRSGSNLESWYMIDCRLDNIFVNILTENKRQDLNLEELYAPPDQKHLYRREAPAEDVAPKEGDDNVLAGLKRLAARNQRRYFTTVPARVQIIDALSRQDFDLVLNVVSASKMDSLDILKAANQTLRSMPYGVKIEGESWITFLDEVWPLAPYSQDFWSTRLELFKLLNCAAPGQVNVDRVFTGYLKFKLASGESLTKSDLVEFLQLVETNLSENSHVDYEDLVAKNKCVLEALKLYKGLDPRLILDSEVMCLLLSTLSITQSGSTSTLRAFYEMVEFASREFSQEPPVPVTATVLRILADKQDYARILRFWEKSIASSPEKDHRPWPLFLDTVASTGDQEFAKKVIRDGHLLWIKRNGVKASPELREAIERLFAVADPAEVAFKDVKEFLTVE

Annotated regions:
phrase: IIDALSRQDFDLVLNVVSASKMDSLDILKAANQTLRSMPYGVKIEGESWITFLDEVWPLAPYSQDFWSTRLELFKLLNCAAPGQVNVDRVFTGYLKFKLASGESLTKSDLVEFLQLVETNLSENSHVDYEDLVAKNKCVLEALKLYKGLDPRLILDSEVMCLLLSTLSITQSGSTSTLRAFYEMVEFASREFSQEPPVPVTATVLRILADKQDYARILRFWEKSIASSPEKDHRPWPLFLDTVASTGDQEFAKKVIRDGHLLWIKRNGVKASPELREAIERLFA
type: DOMAIN
name: ATP25_mRNA_stabil_dom
description: ATP25 mRNA stabilisation domain
Protein sequence:
MKLLPSVVLKLFLAAVFSALVTGESLERLRRGLADGTSNLVSPTESTDQLLPPGGGRGREVLDLEEADLDLLRADFSSKPQALATPSKEERGKRKKKGKGLGKKRDPCLRKYKDFCIHGECKYVKELRAPSCICHPGYHGERCHGLSLPVKNRLYTYDHTTILAVVAVVLSSVCLLVIVGLLMFRYHRRGGYDVENEEKVKLGVTASH

Annotated regions:
phrase: CICHPGYHGER
type: DOMAIN
name: EGF-like_dom
description: EGF-like domain

phrase: CICHPGYHGER
type: DOMAIN
name: EGF-like_dom
description: EGF-like domain

phrase: KRDPCLRKYKDFCIHGECKYVKELRAPSCICHPGYHGERC
type: DOMAIN
name: EGF-like_dom
description: EGF-like domain
Protein sequence:
MTGNAPSTCVWILLLFLHIRLLNGQSPPGKPQISKCRSTEKETFSCWWNPGPDGGLPTNYTLTYNKEGNPFTYECPDYNTSGPNSCYFDKKHTSIWTMYIITVNATNQMGSNASDPYYVDVTYIVEPDPPINLILEVKYPEDQKPYLWIKWFPPTQVDVKSGWLTLQYEIRLKPEKANEWEVHFAGQKTQFKILSLYPGKKYLVQVRCKPDHGFWSEWGPEGSIQIPDDSTSTDTTVWIFVAVLSVVVCLIMVWAVAMKGYSMLTCVFPPVPGPKIKGLDIHLLERGKSEELLSSLGCQDFPSDCEDLLVELLEVVDSENQQPVQVHLKKHPDQGLKPTPLDPDSDSGQGSCDSPSLLSNNHEGSQESPSTFHTPGGIEEPENPEGNGAHTWDSQSTSVEGRVPYFCADGPKSSTWPSPQPRNQHNPRSSYHNIADVCKLDPGTAGSSATVLDKTDKCSLTSLETTEPGGEEKAAQQRWVESFHSKTDPDTPWLLPQEDTSVISAKPLDYVEIHKVSKDGALSLFPKQEENGNQTEKAGGLKTRMEYSKVARVMESSILVLVQDPPAPDLALFEEPAEEAPPSLPHNQEEKDLAAFAMTPSNCRLAGLDYLDPACLKHSFQ

Annotated regions:
phrase: PDPPINLILEVKYPEDQKPYLWIKWFPPTQVDVKSGWLTLQYEIRLKPEKANEWEVHFAGQKTQFKILSLYPGKKYLVQVRCKPDHGFWSEWGPEGSI
type: DOMAIN
name: FN3_dom
description: Fibronectin type III

phrase: LWIKWFPPTQVDVKSGWLTLQYEIRLKPEKANEWEVHFAGQKTQFKILSLYPGKKYLVQVRCKPDHGFWSEWGPEGS
type: CONSERVED_SITE
name: Long_hematopoietin_rcpt_CS
description: Long hematopoietin receptor, single chain, conserved site

phrase: PPGKPQISKCRSTEKETFSCWWNPGPDGGLPTNYTLTYNKEGNPFTYECPDYNTSGPNSCYFDKKHTSIWTMYIITVNATNQMGSNASDPYYVDVTYIVEP
type: DOMAIN
name: FN3_dom
description: Fibronectin type III

phrase: PPINLILEVKYPEDQKPYLWIKWFPPTQVDVKSGWLTLQYEIRLKPEKANEWEVHFAGQKTQFKILSLYPGKKYLVQVRCKPDHGFWSEWGPEGSIQIPD
type: DOMAIN
name: FN3_dom
description: Fibronectin type III

phrase: PGKPQISKCRSTEKETFSCWWNPGPDGGLPTNYTLTYNKEGNPFTYECPDYNTSGPNSCYFDKKHTSIWTMYIITVNATNQMGSNASDPYY
type: DOMAIN
name: FN3_dom
description: Fibronectin type III

phrase: PGKPQISKCRSTEKETFSCWWNPGPDGGLPTNYTLTYNKEGNPFTYECPDYNTSGPNSCYFDKKHTSIWTMYIITVNATNQMGS
type: DOMAIN
name: FN3_dom
description: Fibronectin type III

phrase: PDPPINLILEVKYPEDQKPYLWIKWFPPTQVDVKSGWLTLQYEIRLKPEKANEWEVHFAGQKTQFKILSLYPGKKYLVQVRCKPDHGF
type: DOMAIN
name: FN3_dom
description: Fibronectin type III

phrase: QSPPGKPQISKCRSTEKETFSCWWNPGPDGGLPTNYTLTYNKEGNPFTYECPDYNTSGPNSCYFDKKHTSIWTMYIITVNATNQMGSNASDPYYV
type: DOMAIN
name: Growth/epo_recpt_lig-bind
description: Growth hormone/erythropoietin receptor, ligand binding
Protein sequence:
MKQLLDFLPLIIFFAVYKFFDIYIASGALIAATALQLVVTYALYKKLEKMHLITFAMVTVFGTLTLVFHDDAFIKWKVTIIYALFALALGVSQLLNKSILKSMLGKEMKVADNIWAHVTWYWVSFFAICGLVNIYVAFRLPLETWVNFKVFGLTALTLINTVITVFYLYKHLPEDQRKELK

Annotated regions:
Protein sequence:
MSKASKTAAADASITTGSARVKRGFADKLKGGVIMDVVTPEQAKIAEDAGASAVMALERVPADIRAQGGVSRMSDPDMIAGIIDAVEIPVMAKARIGHFVEAEVLEALGVDFIDESEVLSPADYKNHIDKFDFETPFVCGATNLGEALRRINEGAAMIRSKGEAGTGDVSNAVTHMRTIRAEINRLSNMAEDELYVAAKELAAPYELVVEVARNGKLPVTLFTAGGIATPADAAMMMHLGAEGVFVGSGIFKSGNPAQRAAAIVKATQNYQDPKVIADVSRGLGEAMVGINVDELPVSHRLAERGW

Annotated regions:
phrase: ARVKRGFADKLKGGVIMDVVTPEQAKIAEDAGASAVMALERVPADIRAQGGVSRMSDPDMIAGIIDAVEIPVMAKARIGHFVEAEVLEALGVDFIDESEVLSPADYKNHIDKFDFETPFVCGATNLGEALRRINEGAAMIRSKGEAGTGDVSNAVTHMRTIRAEINRLSNMAEDELYVAAKELAAPYELVVEVARNGKLPVTLFT
type: DOMAIN
name: PdxS/SNZ_N
description: PdxS/SNZ N-terminal domain
Protein sequence:
MASPAKDIRALSDDDLKAFLVTHGEKPFRAKQISEWLWSHGAGRFEDMSNLSKSLRNTLEDAFSLERVSLTESQTSTDGTVKCAFAIDGNEARVVEGVLIPTTKRLTACISSQVGCSLACKFCATGKLKLLKNLTAGEMYDQVEMLNALAMENHGKPLSNIVYMGMGEPLLNYSNVLDSVERITGTPGLGMSPKRITVSTAGIAKAIRRLGDDEVKFNLALSLHAANDAKRDHIMAINESNNLEVLAAALRHFHEKTGTRVTFEYIVFKDFNDSLQDARELATFCKHIPCKINLIEYNPIDGGEFQQTTPQRLDDFVAFLEDCNLIVNVRRSRGKDIDAACGQLANKNKLGETAPRKEAVSRA

Annotated regions:
phrase: SSQVGCSLACKFCATGKLKLLKNLTAGEMYDQVEMLNALAMENHGKPLSNIVYMGMGEPLLNYSNVLDSVERITGTPGLGMSPKRITVSTAGIAKAIRRLGDDEVKFNLALSLHAANDAKRDHIMAINESNNLEVLAAALRHFHEKTGTRVTFEYIVFKDFNDSLQDAR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: RALSDDDLKAFLVTHGEKPFRAKQISEWLWSHGAGRFEDMSNLSKSLRNTLED
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: LTACISSQVGCSLACKFCATGKLKLLKNLTAGEMYDQVEMLNALAMENHGKPLSNIVYMGMGEPLLNYSNVLDSVERITGTPGLGMSPKRITVSTAGIAKAIRRLGDDEVKFNLALSLHAANDAKRDHIMAINESNNLEVLAAALRHFHEKTGTRVTFEYIVFKDFNDSLQDARELATFCKHIPCKINLIEYNPIDGGEFQQTTPQRLDDFVAFLE
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: TTKRLTACISSQVGCSLACKFCATGKLKLLKNLTAGEMYDQVEMLNALAMENHGKPLSNIVYMGMGEPLLNYSNVLDSVERITGTPGLGMSPKRITVSTAGIAKAIRRLGDDEVKFNLALSLHAANDAKRDHIMAINESNNLEVLAAALRHFHEKTGTRVTFEYIVFKDFNDSLQDARELATFCKHIPCKINLIEYNPIDGGEFQQTTPQRLDDFVAFLEDCNLIVNVRRSRGK
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MPSNMKQFCKISVWLQQHDPDLLEIINNLCMLGNLSAAKYKHGVTFIYPKQAKIRDEIKKHAYSNDPSQAIKTLESLILPFYIPTPMEFTGEIGSYTGVKLEVEKKEANKVILKNGEAVLIPAADFKPFPDRRLAVWIMESGSMPLEGPPYKRKKEGGGNDPPVSKHISPYTPRTRIAIEVEKAFDECMRQNWCSVNNPYLAKSVSLLSFLSLNHPTEFIKVLPLIDFDPLVTFYLLLEPYKTHGDDFLIPETILFGPTGWNGTDLYQSAMLEFKKFFTQITRQTFMDIADTATKEVDVPICYSDPETVHSYANHVRTEILHHNMVNKVTTPNLVVQAYNELEQTNTIRHYGPIFPESTINALRFWKKLWQDEQRFVIHGLHRTLMDQPTYETSEFAEIVRNLRFSRPGNNYINELNITSPAMYGDKHTTGDIAPNDRFAMLVAFINSTDFLYTAIPEEKVGGNDTQTGSQTSSLTDLVPTRLHSFLNHNLSKLKILNRAQQTVKNILSNDCLNQLKHYVKHTGKNEILKLLQE

Annotated regions:
Protein sequence:
MDRSAEFRKWKAQCLSKADLSRKGSVDEDVVELVQFLNMRDQFFTTSSCAGRILLLDRGINGFEVQKQNCCWLLVTHKLCVKDDVIVALKKANGDATLKFEPFVLHVQCRQLQDAQILHSMAIDSGFRNSGITVGKRGKTMLAVRSTHGLEVPLSHKGKLMVTEEYIDFLLNVANQKMEENKKRIERFYNCLQHALERETMTNLHPKIKEKNNSSYIHKKKRNPEKTRAQCITKESDEELENDDDDDLGINVTIFPEDY

Annotated regions:
phrase: WKAQCLSKADLSRKGSVDEDVVELVQFLNMRDQFFTTSSCAGRILLLDRGINGFEVQKQNCCWLLVTHKLCVKDDVIVALKKANGDATLKFEPFVLHVQCRQLQDAQILHSMAIDSGFRNSGITVGKRGKTMLAVRSTHGLEVPLSHKGKLMVTEEYIDFLLNVANQKMEENKKRIERFYNCL
type: DOMAIN
name: tRNA_yW-synthesising
description: tRNA wybutosine-synthesizing protein
Protein sequence:
MNLTDKTVLITGGASGIGYAAVQAFLNQQANVVVADIDEAQGEAMIRKENNDRLHFVQTDITNEPACQNAILSAVDKFGGLDVLINNAGIEIVAPIHEMELSDWNKVLNVNLTGMFLMSKHALKYMLKSGKGNIINTCSVGGVVAWPDIPAYNASKGGVLQTDAFYRPSIIAKHNIRVNCVCPGIIDTPLNEKSFLENNEGTLEEIKKEKAKVNPLLRLGKPEEIANVMLFLASDLSSYMTGSAITADGGYTAQ

Annotated regions:
Protein sequence:
MESSLKIKDIPQNERPKEKLLTYGAESLSNSELLAIIIRTGTQGENVLQLCSRLLSELEGLNGILDASFDDIISIKGIKQGKASQILALAELFKRFRTLKAINNDIKITSPKDLASLLMGEMNELNQEVLKVVLLNTKNIVVGIKDVFKGSLNTSVVHPREIFKQAISKNSASIIICHNHPSGDPTPSREDINITLRIKECGNIIGIQLVDHIIIGNNKFVSLKERGLI

Annotated regions:
phrase: KITSPKDLASLLMGEMNELNQEVLKVVLLNTKNIVVGIKDVFKGSLNTSVVHPREIFKQAISKNSASIIICHNHPSGDPTPSREDINITLRIKECGNIIGIQLVDHIIIGNNKFVSLKERGL
type: DOMAIN
name: MPN
description: MPN domain

phrase: HNHPS
type: CONSERVED_SITE
name: UPF0758_CS
description: Uncharacterised protein family UPF0758, conserved site

phrase: ITSPKDLASLLMGEMNELNQEVLKVVLLNTKNIVVGIKDVFKGSLNTSVVHPREIFKQAISKNSASIIICHNHPSGDPTPSREDINITLRIKECGNIIGIQLVDHIIIGNNKFVSLKERG
type: DOMAIN
name: RadC_JAB
description: RadC-like JAB domain

phrase: KDLASLLMGEMNELNQEVLKVVLLNTKNIVVGIKDVFKGSLNTSVVHPREIFKQAISKNSASIIICHNHPSGDPTPSREDINITLRIKECGNIIGIQLVDHIIIGNNKFVSL
type: DOMAIN
name: RadC_JAB
description: RadC-like JAB domain

phrase: IKDIPQNERPKEKLLTYGAESLSNSELLAIIIRTGTQGENVLQLCSRLLSELEGLNGILDASFDDIISIKGIKQGK
type: DOMAIN
name: UPF0758_N
description: UPF0758, N-terminal
Protein sequence:
MLAVAVLAAGKGTRMKSALPKVLQPLAGATLVERVLASARNLAPERRLLIVGHQAERVEAQLSSNGGLEFVLQQPQNGTGHAVQQLLAPLQGFQGELLVLNGDVPLLRAETIEALVSTHRSSQADVTLLTARLDDPTGYGRVFADANGRVSAIIEHRDCSDEQRSNNLTNAGIYCFNWGKLAEVLPQLSTDNDQGELYLTDTVQLLDVAMQMEVSDPDEVNGINNRRQLAQCEGVLQQRLRDHWMDEGVTFVDPASCTLSEDCSFGCDVVIEPQTHLRGACRIGDNCRLGPGSLLDNAELGCDVTVVQSVVRDARVGNDVAIGPFAHIRPATDVGDSCKIGNFVEIKKSVIAAGSKVNHLSYIGDAELGANVNVGAGTITANFDGTNKHLTVIGEGSKTGANSVLVAPVVIGKNVTIGAGSTITKAVPDGSLAIGRAKQLTKEGWDRNTQAAQS

Annotated regions:
phrase: GVTFVDPASCTLSEDCSFGCDVVIEPQTHLRGACRIGDNCRLGPGSLLDNAELGCDVTVVQSVVRDARVGNDVAIGPFAHIRPATDVGDSCKIGNFVEIKKSVIAAGSKVNHLSYIGDAELGANVNVGAGTITANFDGTNKHLTVIGEGSKTGANSVLVAPVVIGKNVTIGAGSTITKAVPDGSLAIGRAK
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain

phrase: AVLAAGKGTRMKSALPKVLQPLAGATLVERVLASARNLAPERRLLIVGHQAERVEAQLSSNGGLEFVLQQPQNGTGHAVQQLLAPLQGFQGELLVLNGDVPLLRAETIEALVSTHRSSQADVTLLTA
type: DOMAIN
name: MobA-like_NTP_Trfase
description: MobA-like NTP transferase

phrase: CSFGCDVVIEPQTHLRGACRIGDNCRLGPGSL
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: DARVGNDVAIGPFAHIRPATDVGDSCKIGNFVEIK
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: TVIGEGSKTGANSVLVAPVVIGKNVTIGAGSTIT
type: REPEAT
name: Hexapep
description: Hexapeptide repeat
Protein sequence:
MPVIEKKRTRDLPQINERIRFPKIRVIDTDGSQLGILTPQEALQLAEEKELDLVLLSDKADPPVCRIMDYGKYKFEQEKKAREARKKQHTADVKEVKMRYKIEEHDYNVRVKQAERFLKDGDKVKATVMFRGREIQHSDLAEDLLKRMATDLEPFGEVQQAPKKEGRNMMMLISPKK

Annotated regions:
phrase: DVKEVKMRYKIEEHDYNVRVKQAERFLKDGDKVKATVMFRGREIQHSDLAEDLLKRMATDLEPFGEVQQAPKKEGRNMMMLISP
type: DOMAIN
name: Translation_initiation_fac_3_C
description: Translation initiation factor 3, C-terminal

phrase: INERIRFPKIRVIDTDGSQLGILTPQEALQLAEEKELDLVLLSDKADPPVCRIMDYGKYKFEQEKKARE
type: DOMAIN
name: Translation_initiation_fac_3_N
description: Translation initiation factor 3, N-terminal

phrase: RIMDYGKYKFEQE
type: CONSERVED_SITE
name: Translation_initiation_fac3_CS
description: Translation initiation factor 3, conserved site
Protein sequence:
MNLLLNYELFLAKAITFLFIIFITPFIFNIIKRKRTDQKKFKIILLEEKYKNIKKDILLSKMNKLEKKKWIKEEKKKDKEFEKKNKNNIVTLKKKTLFVLDFKGGIHAHEVIGLREEISAILLAANKDDEVLLRLESSGGVIHGYGLAAAQLERLRQNKIRLIISIDKIAASGGYMMACVADYIISAPFAIIGSIGVVGQLPNFNKLLKKCNIDVELHTAGDYKRTLTMFGQNTELTRKKFCQELNLTHEIFKKFIKKMRPCLDIENISNGEHWFGTIAFKKNLVDEINTSDNILMSKMKEKYTLLNIQYIYKNKKLENFTSFIIENIKIIIIKIFSYKKIL

Annotated regions:
phrase: LLLNYELFLAKAITFLFIIFITPFIFNIIKRKRTDQKKFKIILLEEKYKNIKKDILLSKMNKLEKKKWIKEEKKKDKEFEKKNKNNIVTLKKKTLFVLDFKGGIHAHEVIGLREEISAILLAANKDDEVLLRLESSGGVIHGYGLAAAQ
type: DOMAIN
name: Peptidase_S49_N_proteobac
description: Peptidase S49, N-terminal proteobacteria

phrase: LRQNKIRLIISIDKIAASGGYMMACVADYIISAPFAIIGSIGVVGQLPNFNKLLKKCNIDVELHTAGDYKRTLTMFGQNTELTRKKFCQELNLTHEIFKKFIKKMRPCLDIENISNGEHWFGTIAFKKNLVDEINTSDNILMSKMKE
type: DOMAIN
name: Peptidase_S49
description: Peptidase S49

phrase: TLFVLDFKGGIHAHEVIGLREEISAILLAANKDDEVLLRLESSGGVIHGYGLAAAQLERLRQNKIRLIISIDKIAASGGYMMACVADYIISAPFAIIGSIGVVGQLPNFNKLLKKCNIDVELHTAGDYKRTLTMFGQNTELTRKKFCQELNLTHEIFKKFIKKMRPCLDIENISNGEHWFGTIAFKKNLVDEINTSDNIL
type: DOMAIN
name: S49_SppA_C
description: Signal peptide peptidase A-like, C-terminal
Protein sequence:
MATGPDLWNGTVNGTSDGDDWGYRCRFHEDFKYVLLPLSYGVVCVLGLSLNAGALYIFLCRLKTWNASTTYMFHLAVSDALYAASLPLLVYYYARGDHWPFSTALCKLVRFLFYTNLYCSILFLTCISVHRCLGVLRPLRSLRWGHARYARRVAAAVWGLVLACQAPALYFITTTAQGGRITCHDTSAPELFSHFVAYSLVMLSVLFAAPFAVILVCYALMARRLLRPAYGTAGGLPRAKRKSVRTIAVVLAVFALCFLPFHVTRTLYYSFRTLDLSCHTLDAINMAYKITRPLASANSCLDPVLYFLAGQRLVRFARDAKPPTDATPTAQACRRLGLRRSHGTDTKRTEDSASSEDSRRTEITPARGEDIRL

Annotated regions:
phrase: LNAGALYIFLCRLKTWNASTTYMFHLAVSDALYAASLPLLVYYYARGDHWPFSTALCKLVRFLFYTNLYCSILFLTCISVHRCLGVLRPLRSLRWGHARYARRVAAAVWGLVLACQAPALYFITTTAQGGRITCHDTSAPELFSHFVAYSLVMLSVLFAAPFAVILVCYALMARRLLRPAYGTAGGLPRAKRKSVRTIAVVLAVFALCFLPFHVTRTLYYSFRTLDLSCHTLDAINMAYKITRPLASANSCLDPVL
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM
Protein sequence:
MASNATDYIKHHLTFWNSDPSAGFWSLHVDTFSISLVLGFLFAAVFAMVARRASIEAPGRLQLFVEMIVELVQTQVREVFHGKSKMIAPLALTIFCWVFLMNFMDLFPVDLFPMAAQWIGYTFFGLEPHHVYFRVVPSADVNATFAMSLSVLILIVGFSIKAKGLGGWGKELLTAPFHSSNPVGAIILAPLNFAFQLVELAAKPISLSLRLFGNLYAGELIFILIALLPWGLQWVLGAPWAIFHILIITLQAFVFMMLTIVYLSLAVEAH

Annotated regions:
phrase: SLSLRLFGN
type: ACTIVE_SITE
name: ATP_synth_F0_asu_AS
description: ATP synthase, F0 complex, subunit A, active site
Protein sequence:
MAVSERRGLGRGSPAEWGPWLLLLLLLGGSSGRIHRLTLTGEKRADIQLNSFGFYTNGSLEVNLSLLRLGRQDTEEKAPLVGFSLTRVRSGSIRSYSNRDSHECPLRKNSSSLLVLFLINTKDLEVQVRKYGEQKKLFISAGLLPESPSKPGLPKSEHMVTPKVDHAGTTAAPDKAKSKPTGLQGDRQGVSGKDQELVLGLGHLNNSYNFSFHVVIGSRAEEGQYNLNFHNCDNSVPGREQPFDITVMIREKNPEGYLSAAEIPLFKLYMVMSACFLGAGIFWVSILCKNTYNVFKIHWLMAALTFTKSVSLLFHSINYYFINSQGHPIEGLAVMHYITHLLKGALLFITIALIGSGWAFVKYVLSDKEKKIFGIVIPLQVLANVAYIVMESREEGASDYGIWKEILFLVDLICCGTILFPVVWSIRHLQDASGTDGKVAVNLAKLKLFRHYYVMVICYIYFTRIIAILLRAVVPFQWQWLYQLLVEGSTLAFFVLTGYKFQPARDNPYLQLPQEDEEGMQIEQVMTDSGFREGLSKVNKTASGRELL

Annotated regions:
phrase: PLFKLYMVMSACFLGAGIFWVSILCKNTYNVFKIHWLMAALTFTKSVSLLFHSINYYFINSQGHPIEGLAVMHYITHLLKGALLFITIALIGSGWAFVKYVLSDKEKKIFGIVIPLQVLANVAYIVMESREEGASDYGIWKEILFLVDLICCGTILFPVVWSIRHLQDASGTDGKVAVNLAKLKLFRHYYVMVICYIYFTRIIAILLRAVVPFQWQWLYQLLVEGSTLAFFVLTGYKFQPARDN
type: DOMAIN
name: GOST_TM
description: GOST, seven transmembrane domain
Protein sequence:
MADQLNGDMGNLSLGSPQPGQHPGQQPTARSYIPPHMRGKMSAPGSPGSPIASPPMNSPPQPGPGSSPMGGLNNSAWAGNNNFDARAGGGGNWSGGYENGPGPQPWGGPRGGGGFNRNAYRGPNAGGGGGGNMGGGVGRGEGRWIEGKHVIGNSDPRLERDLFGTADDPSKQHTGINFEKYDDIPVNPSGRDVPEPVLTFSNPPLDAHLLSNIELARYQIPTPVQKYSIPIVINGRDLMACAQTGSGKTGGFLFPIMHQSFTQGPSPIPAQSGGGYRQRKAYPTALILAPTRELVSQIYEEARKFAYRSWVRPCVVYGGADIGSQLRQMERGCDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMGFEPQIRRIVQGEDMPTTGQRQTLMFSATFPRDIQMLAQDFLNDYVFLSVGRVGSTSENITQKVEYVEDVDKRSVLLDILHTHAGGLTLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRERERALELFRNGKCPILVATAVAARGLDIPNVTHVINYDLPTDVDDYVHRIGRTGRAGNTGIATAFFNRGNRGIVRELLDLLKEANQEVPAFLETIARESSFGGGGGRGRGGGGRGRGGRGGNTDFRKYGGGGGGFGGGGGGFGGGQHGSGGGGGFGGGGGYGGAPQSGGYGGGYSGGYGGGYGNPGGAGGQSWW

Annotated regions:
phrase: TPVQKYSIPIVINGRDLMACAQTGSGKTGGFLFPIMHQSFTQGPSPIPAQSGGGYRQRKAYPTALILAPTRELVSQIYEEARKFAYRSWVRPCVVYGGADIGSQLRQMERGCDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMGFEPQIRRIVQGEDMPTTGQRQTLMFSATFPRDIQ
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: VLDEADRM
type: CONSERVED_SITE
name: RNA-helicase_DEAD-box_CS
description: ATP-dependent RNA helicase DEAD-box, conserved site

phrase: NITQKVEYVEDVDKRSVLLDILHTHAGGLTLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRERERALELFRNGKCPILVATAVAARGLDIPNVTHVINYDLPTDVDDYVHRIGRTGRAGNTGIATAFFNRGNRGIVRELLDLLKEANQEVPAFLETI
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: RYQIPTPVQKYSIPIVINGRDLMACAQTGSGKTGGFLFPIMHQSFTQGPSPIPAQSGGGYRQRKAYPTALILAPTRELVSQIYEEARKFAYRSWVRPCVVYGGADIGSQLRQMERGCDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMGFEPQIRRIVQGEDMPTTGQRQTLMFSATFPRDIQMLAQDFLNDYVFLSVGRVGSTSENITQ
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: DSLSDFLINQNFPATSIHGDRTQRERERALELFRNGKCPILVATAVAARGLDIPNVTHVINYDLPTDVDDYVHRIGRTGRA
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: IPIVINGRDLMACAQTGSGKTGGFLFPIMHQSFTQGPSPIPAQSGGGYRQRKAYPTALILAPTRELVSQIYEEARKFAYRSWVRPCVVYGGADIGSQLRQMERGCDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMGFEPQIRRIVQGEDMPTTGQRQTLMFSATFPRDIQMLAQDFLNDYVF
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: TFSNPPLDAHLLSNIELARYQIPTPVQKYSIPIVINGRDLMACAQTGSGKTGGFLFPIMHQSFTQGPSPIPAQSGGGYRQRKAYPTALILAPTRELVSQIYEEARKFAYRSWVRPCVVYGGADIGSQLRQMERGCDLLVATPGRLVDLIERGRISLCNIKYLVLDEADRMLDMGFEPQIRRIVQGEDMPTTGQRQTLMFSATFPRDIQMLAQDFLNDYVFLSVGRV
type: DOMAIN
name: Ded1/Dbp1_DEADc
description: Ded1/Dbp1, DEAD-box helicase domain

phrase: KRSVLLDILHTHAGGLTLIFVETKRMADSLSDFLINQNFPATSIHGDRTQRERERALELFRNGKCPILVATAVAARGLDIPNVTHVINYDLPTDVDDYVHRIGRTGRA
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: LTFSNPPLDAHLLSNIELARYQIPTPVQ
type: DOMAIN
name: RNA_helicase_DEAD_Q_motif
description: RNA helicase, DEAD-box type, Q motif
Protein sequence:
MNEKGFTLIEMLVVMLVISILLLITIPNVTKHNQSIQKKGCEGLINMVQAQITAYQMDHDGKTPNRAELESEGYIKKNLKCPNGKAIKISNGKAQAD

Annotated regions:
phrase: KGFTLIEMLVVMLVISILLLIT
type: PTM
name: N_methyl_site
description: Prokaryotic N-terminal methylation site

phrase: KGFTLIEMLVVMLVISILLL
type: PTM
name: N_methyl_site
description: Prokaryotic N-terminal methylation site

phrase: NEKGFTLIEMLVVMLVISILLLI
type: PTM
name: N_methyl_site
description: Prokaryotic N-terminal methylation site