nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MPVKRLREVVSQNHGDHLVLLKDELPCVPPALSANKRLPVGTGTSLNGTSRGSSDLTSARNCYQPLLENPMVSESDFSKDVAVQVLPLDKIEENNKQKANDIFISQYTMGQKDALRTVLKQKAQSMPVFKEVKVHLLEDAGIEKDAVTQETRISPSGIDSATTVAAATAAAIATAAPLIKVQSDLEAKVNSVTELLSKLQETDKHLQRVTEQQTSIQRKQEKLHCHDHEKQMNVFMEQHIRHLEKLQQQQIDIQTHFISAALKTSSFQPVSMPSSRAVEKYSVKPEHPNLGSCNPSLYNTFASKQAPLKEVEDTSFDKQKSPLETPAPRRFAPVPVSRDDELSKRENLLEEKENMEVSCHRGNVRLLEQILNNNDSLTRKSESSNTTSLTRSKIGWTPEKTNRFPSCEELETTKVTMQKSDDVLHDLGQKEKETNSMVQPKESLSMLKLPDLPQNSVKLQTTNTTRSVLKDAEKILRGVQNNKKVLEENLEAIIRAKDGAAMYSLINALSTNREMSEKIRIRKTVDEWIKTISAEIQDELSRTDYEQKRFDQKNQRTKKGQNMTKDIRTNTQDKTVNKSVIPRKHSQKQIEEHFRNLPMRGMPASSLQKERKEGLLKATTVIQDEDYMLQVYGKPVYQGHRSTLKKGPYLRFNSPSPKSRPQRPKVIERVKGTKVKSIRTQTDFYATKPKKMDSKMKHSVPVLPHGDQQYLFSPSREMPTFSGTLEGHLIPMAILLGQTQSNSDTMPPAGVIVSKPHPVTVTTSIPPSSRKVETGVKKPNIAIVEMKSEKKDPPQLTVQVLPSVDIDSISNSSADVLSPLSSPKEASLPPVQTWIKTPEIMKVDEEEVKFPGTNFDEIIDVIQEEEKCDEIPDSEPILEFNRSVKADSTKYNGPPFPPVASTFQPTADILDKVIERKETLENSLIQWVEQEIMSRIISGLFPVQQQIAPSISVSVSETSEPLTSDIVEGTSSGALQLFVDAGVPVNSNVIKHFVNEALAETIAVMLGDREAKKQGPVATGVSGDASTNETYLPARVCTPLPTPQPTPPCSPSSPAKECVLVKTPDSSPCDSDHDMAFPVKEICAEKGDDMPAIMLVNTPTVTPTTTPPPAAAVFTPTLSDISIDKLKVSSPELPKPWGDGDLPLEEENPNSPQEELHPRAIVMSVAKDEEPESMDFPAQPPPPEPVPFMPFPAGTKAPSPSQMPGSDSSTLESTLSVTVTETETLDKPISEGEILFSCGQKLAPKILEDIGLYLTNLNDSLSSTLHDAVEMEDDPPSEGQVIRMSHKKFHADAILSFAKQNQESAVSQQAVYHSEDLENSVGELSEGQRPQLTAAAENILMGHSLYMQPPVTNTQSLDQQCDPKPLSRQFDTVSGSIYEDSCASHGPMSLGELELEPNSKLVLPTTLLTAQENDVNLPVAAEDFSQYQLKQNQDVKQVEHKPSQSYLRVRNKSDIAPSQQQVSPGDMDRTQIELNPYLTCVFSGGKAVPLSASQMPPAKMSVMLPSVNLEDCSQSLSLSTMQEDMESSGADTF

Annotated regions:
Protein sequence:
MSKHWTERIAEELSQQKKDEYIIGSGTSISGSVHIGNSCDIFIANAVSKELRKIGENAKTVWIADDYDPLRKVPYPLPENYSKYLGQPYYEIPCPEGCCENFVEHFQKPFVNSLKPFDIENLEIKSGAQMYKNGVYTEATKVALENTERIREIFNEYREHPLSEDWLPYNAICSECGRVNTTHAYDFEGTNIKYKCDCGHEGEVDYTTGMGKLTWRVEWAARWKILNITCEPFGKDHAASGGSYDVSKIISDEIFNYPAPYPVPYEWITLDGDAMSKSKGVFFSPEAWLKIGKPETLNYYIFRNKPLKPKDFTPKMGFLDLMDQYDRVERIAYGQEEASNEKEKEKLTKIYEVSQINDMPDEMPFQPSYRFLTVAYQIANGNANKIYTILKNNNQLPERLENVTFEDLSEFDRDTFLQRIEYVHNWLETYGPKFVKFQVMNKMPRIEITDEQKEFLKQIANILESETFENDVQFHDRMYEVLESLGMKPQKAFQAIYKTIIGKKQGPRAASFVLSLDKDFVIKRFRLEE

Annotated regions:
phrase: EITDEQKEFLKQIANILESETFENDVQFHDRMYEVLESLGMKPQKAFQAIYKTIIGKKQGPRAASFVLSLDKDFVIKRF
type: DOMAIN
name: aa-tRNA-synth_I_cd-bd
description: Aminoacyl-tRNA synthetase, class I, anticodon-binding
Protein sequence:
MALLYSAASLATPSGTMKLIIKLHPEITIKSDDVRRRFTRLLESNVRNVFKPYEFKVAVHNRWDKLELVAAADTPEQQQQVRAQLKCIPGIEQCLLVKESDYQDLDDIYQQVKQVWGDKLAGKTFAVRAKRRGKHEFSSMEVARYVGGGLNQNCNTAGVKLKNPDVTIELEVNKDKLLIIHERFKCLGGMPLPTQEDVVSLISGGFDSSVASFQMIRRGARTHFCFFNLGGREHEIGVKQVCKYLWQRYSASHRVKFIGVDFEPVVAEILEKVDNGLMGVVLKRMMMRAAALVADKLATSTIVTGECMGQVSSQTLANLDVINKATDKLVLRPLIAMDKSEIIRQAREIGVEDLAAGIPEYCGVISKKPTVKAILERVEEEEAKLSADLIERVVYAADMQDIRRIVKEAEHQVSSAETSSTLPEAAVVVDIRSQDEVDDKPLSLDGIAIEHIPFFKLATQFAELPQDREYYLYCDRGVMSQMQALLLKEQGYSNVRVYRPK

Annotated regions:
phrase: YQDLDDIYQQVKQVWGDKLAGKTFAVRAKRRGKHEFSSMEVARYVGGGLNQNCNTAGVKLKNPDVTIELEVNKDKLLI
type: DOMAIN
name: THUMP_dom
description: THUMP domain

phrase: IIKLHPEITIKSDDVRRRFTRLLESNVRNVFKPYEFKVAVHNRWDKLELVAAADTPEQQQQVRAQLKCIPGIE
type: DOMAIN
name: ThiI_fer
description: ThiI, ferredoxin-like domain

phrase: VVVDIRSQDEVDDKPLSLDGIAIEHIPFFKLATQFAELPQDREYYLYCDRGVMSQMQALLLKEQGYSNVRV
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain

phrase: KLIIKLHPEITIKSDDVRRRFTRLLESNVRNVFKPYEFKVAVHNRWDKLELVAAADTPEQQQQVRAQLKCIPGIEQCLLVKESDYQDLDDIYQQVKQVWGDKLAGKTFAVRAKRRGKHEFSSMEVARYVGGGLNQNCNTAGVKLKNPDVTIELEVNKDKLLIIHERFKCL
type: DOMAIN
name: THUMP_ThiI
description: ThiI, THUMP domain

phrase: QQVRAQLKCIPGIEQCLLVKESDYQDLDDIYQQVKQVWGDKLAGKTFAVRAKRRGKHEFSSMEVARYVGGGLNQNCNTAGVKLKNPDVTIELEVNKDKLLIIHE
type: DOMAIN
name: THUMP_dom
description: THUMP domain

phrase: IIKLHPEITIKSDDVRRRFTRLLESNVRNVFKPYEFKVAVHNRWDKLELVAAADTPEQQQQVRAQLKCIPGIEQCLLVKESDYQDLDDIYQQVKQVWGDKLAGKTFAVRAKRRGKHEFSSMEVARYVGGGLNQNCNTAGVKLKNPDVTIELEVNKDKLLIIHERFKCLGGMPLPTQEDVVSLISGGFDSSVASFQMIRRGARTHFCFFNLGGREHEIGVKQVCKYLWQRYSASHRVKFIGVDFEPVVAEILEKVDNGLMGVVLKRMMMRAAALVADKLATSTIVTGECMGQVSSQTLANLDVINKATDKLVLRPLIAMDKSEIIRQAREIGVEDLAAGIPEYCGVISKKPTVKAILERVEEEEAKLSADL
type: DOMAIN
name: ThiI_N
description: ThiI, N-terminal

phrase: EQCLLVKESDYQDLDDIYQQVKQVWGDKLAGKTFAVRAKRRGKHEFSSMEVARYVGGGLNQNCNTAGVKLKNPDVTIELEVNKDKLLIIHE
type: DOMAIN
name: THUMP_dom
description: THUMP domain

phrase: TQEDVVSLISGGFDSSVASFQMIRRGARTHFCFFNLGGREHEIGVKQVCKYLWQRYSASHRVKFIGVDFEPVVAEILEKVDNGLMGVVLKRMMMRAAALVADKLATSTIVTGECMGQVSSQTLANLDVINKATDKLVLRPLIAMDKSEIIRQAREIGVEDLAAGIPEYCGVISKKPTVKAILERVEEEEAK
type: DOMAIN
name: ThiI_AANH
description: Thil, AANH domain

phrase: TQEDVVSLISGGFDSSVASFQMIRRGARTHFCFFNLGGREHEIGVKQVCKYLWQRYSASHRVKFIGVDFEPVVAEILEKVDNGLMGVVLKRMMMRAAALVADKLATSTIVTGECMGQVSSQTLANLDVINKATDKLVLRPLIAMDKSEIIRQAREIGVEDLAAGIPEYCGVISKKPTVK
type: DOMAIN
name: ThiI_AANH
description: Thil, AANH domain

phrase: DIRRIVKEAEHQVSSAETSSTLPEAAVVVDIRSQDEVDDKPLSLDGIAIEHIPFFKLATQFAELPQDREYYLYCDRGVMSQMQALLLKEQGYSNVRVYR
type: DOMAIN
name: THII_Thiazole_biosynth_dom
description: ThiI, thiazole biosynthesis domain

phrase: LPEAAVVVDIRSQDEVDDKPLSLDGIAIEHIPFFKLATQFAELPQDREYYLYCDRGVMSQMQALLLKEQGYSNVRV
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain
Protein sequence:
MKKQDISVKTVVAIGIGAAVFVILGRFVVIPTGFPNTNIETSYAFLALISAIFGPFAGLMTGLVGHAIKDFTTYGSAWWSWVICSGIIGCLYGWIGLKLNLSSGLFSRKSMIYFNIGQIIANIICWALIAPTLDILIYNEPANKVYTQGVISAVLNIISVGIIGTILLKAYASSQIKKGSLRKE

Annotated regions:
Protein sequence:
MSLEPQNNLLANINTNSENLPENDVPMSITEHLEELRQRTVFVFIFFLLAATISFTQIKIIVEIFQAPAIGIKFLQLAPGEYFFSSIKIAIYCGIVATTPFGVYQVILYILPGLTNKERKVILPILIGSIVLFIVGGIFAYFVLAPAALNFLISYGADIVEPLWSFEQYFDFILLLLFSTGLAFEIPIIQLLLGISGTVSASQMLLAWRYIIIISTIIGAVLTPSTDPVTQIIMSSAVLALYFSGVIILFLLRK

Annotated regions:
phrase: YFDFILLLLFSTGLAFEIP
type: CONSERVED_SITE
name: Sec-indep_translocase_CS
description: Sec-independent periplasmic protein translocase, conserved site
Protein sequence:
MTPPTASFINPATAGPQPGSFKLSKGSLHACSTTAAPKYEQYVPIKTGEEPIEDFNGHYRFAEIKESHTSRAMTARYMADMMDAAVSDVVIIGAGSAGLTCAYTLAKQRPDLRITMLEASVAPGGGAWLGGQLMSGMVIRKPAHNLLVEIGVPFDDEGSYVVVKHAALFTSTLMSKLLAMDNVKLFNATCCEDLIIKKDQTGAQRVNGVVTNWTLVTMAHGLQSCMDPQTITAPVVIGACGHDGPFGAFSVKRLSSAGLIKLGDMRPMDMNKSEGLIVNNTREVFPGLIVSGMELSEHDGHPRMGASFGGMIGSGQKAAYEAIKLYDSLEIDDGEVVGLKH

Annotated regions:
Protein sequence:
MATSAIQQSSFAGQTALKPSNELLRKVGVSGGGRVTMRRTVKSTPQSIWYGPDRPKYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANNAWSYATNFVPGN

Annotated regions:
Protein sequence:
MDKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWRVISSIEQKTDTSDKKMQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAAEGAEN

Annotated regions:
phrase: YKDSTLIMQLLRDNLTLWT
type: CONSERVED_SITE
name: 14-3-3_CS
description: 14-3-3 protein, conserved site

phrase: RNLLSVAYKN
type: CONSERVED_SITE
name: 14-3-3_CS
description: 14-3-3 protein, conserved site

phrase: KAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWRVISSIEQKTDTSDKKMQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLW
type: DOMAIN
name: 14-3-3_domain
description: 14-3-3 domain

phrase: KTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWRVISSIEQKTDTSDKKMQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIENSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEECDAAE
type: DOMAIN
name: 14-3-3_domain
description: 14-3-3 domain
Protein sequence:
MAGKLDRLQRSLGHRFDNPALLEQALTHRSFGQPNNERLEFLGDSILNCVVAIALFERFASLREGEMSRLRASLVCQDGLHRVALELDLGEYLRLGEGEMKSGGFRRPSILADALEAVFAATFLDQGFAAAKAVIDRLYDPMIAAIDPGVAAKDPKTALQELLQGRKLPLPTYVMAKVHGEAHAQEFEVVCEVNALNLRTTGRGTNRRAAEQQAAELALAQLRKP

Annotated regions:
phrase: PKTALQELLQGRKLPLPTYVMAKVHGEAHAQEFEVVCEVNALNLRTTGRGTNRRAAEQQAAELALAQL
type: DOMAIN
name: dsRBD_dom
description: Double-stranded RNA-binding domain

phrase: NPALLEQALTHRSFGQPNNERLEFLGDSILNCVVAIALFERFASLREGEMSRLRASLVCQDGLHRVALELDLGEYLRLGEGEMKSGGFRRPSILADALEAVFAATFLDQGFAAAKAVID
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: ALLEQALTHRSFGQPNNERLEFLGDSILNCVVAIALFERFASLREGEMSRLRASLVCQDGLHRVALELDLGEYLRLGEGEMKSGGFRRPSILADALEAVFAATFLDQGFAAAKAVIDRLYDPMIAAID
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: ERLEFLGD
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: LDRLQRSLGHRFDNPALLEQALTHRSFGQPNNERLEFLGDSILNCVVAIALFERFASLREGEMSRLRASLVCQDGLHRVALELDLGEYLRLGEGEMKSGGFRRPSILADALEAVFAATFLDQ
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: DPKTALQELLQGRKLPLPTYVMAKVHGEAHAQEFEVVCEVNALNLRTTGRGTNRRAAEQQAAELALAQLR
type: DOMAIN
name: dsRBD_dom
description: Double-stranded RNA-binding domain

phrase: LLEQALTHRSFGQPNNERLEFLGDSILNCVVAIALFERFASLREGEMSRLRASLVCQDGLHRVALELDLGEYLRLGEGEMKSGGFRRPSILADALEAVFAATFLDQGFAAAKAVIDRLYDPMIAAID
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: PKTALQELLQGRKLPLPTYVMAKVHGEAHAQEFEVVCEVNALNLRTTGRGTNRRAAEQQAAELALAQ
type: DOMAIN
name: dsRBD_dom
description: Double-stranded RNA-binding domain
Protein sequence:
MTPRSRGPRRRPLDPARRAAFETLRAVSARDAYANLVLPALLAQRGIGGRDAAFATELTYGTCRARGLLDAVIGAAAERSPQAIDPVLLDLLRLGTYQLLRTRVDAHAAVSTTVEQAGIEFDSARAGFVNGVLRTIAGRDERSWVGELAPDAQNDPIGHAAFVHAHPRWIAQAFADALGAAVGELEAVLASDDERPAVHLAARPGVLTAGELARAVRGTVGRYSPFAVYLPRGDPGRLAPVRDGQALVQDEGSQLVARALTLAPVDGDTGRWLDLCAGPGGKTALLAGLGLQCAARVTAVEPSPHRADLVAQNTRGLPVELLRVDGRHTDLDPGFDRVLVDAPCTGLGALRRRPEARWRRQPADVAALAKLQRELLSAAIALTRPGGVVLYATCSPHLAETVGAVADALRRHPVHALDTRPLFEPVIAGLGEGPHVQLWPHRHGTDAMFAAALRRLT

Annotated regions:
phrase: FADALGAAVGELEAVLASDDERPAVHLAARPGVLTAGELARAVRGTVGRYSPFAVYLPRGDPGRLAPVRDGQALVQDEGSQLVARALTLAPVDGDTGRWLDLCAGPGGKTALLAGLGLQCAARVTAVEPSPHRADLVAQNTRGLPVELLRVDGRHTDLDPGFDRVLVDAPCTGLGALRRRPEARWRRQPADVAALAKLQRELLSAAIALTRPGGVVLYATCSPHLAETVGAVADALRRHPVHALDTRPLFEPVIAGLGEGPHVQLWPHRHGTDAMFAAALRR
type: DOMAIN
name: MeTrfase_RsmB-F_NOP2_dom
description: SAM-dependent methyltransferase RsmB-F/NOP2-type domain

phrase: LTLAPVDGDTGRWLDLCAGPGGKTALLAGLGLQCAARVTAVEPSPHRADLVAQNTRGLPVELLRVDGRHTDLDPGFDRVLVDAPCTGLGALRRRPEARWRRQPADVAALAKLQRELLSAAIALTRPGGVVLYATCSPHLAETVGAVADALRRHPVHALDTRPLFEPVIAGLGEGPHVQLWPHRHGTDAMFAAAL
type: DOMAIN
name: MeTrfase_RsmB-F_NOP2_cat
description: SAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic core

phrase: DPARRAAFETLRAVSARDAYANLVLPALLAQRGIGGRDAAFATELTYGTCRARGLLDAVIGAAAERSPQAIDPVLLDLLRLGTYQLLRTRVDAHAAVSTTVEQAGIEFDSARAGFVNGVLRTIAGR
type: DOMAIN
name: RsmB-like_N
description: Ribosomal RNA small subunit methyltransferase B-like, N-terminal domain

phrase: FDRVLVDAPCT
type: CONSERVED_SITE
name: RsmB/NOL1/NOP2-like_CS
description: RsmB/NOL1/NOP2-like, conserved site

phrase: PARRAAFETLRAVSARDAYANLVLPALLAQRGIGGRDAAFATELTYGTCRARGLLDAVIGAAAERSPQAIDPVLLDLLRLGTYQLLRTRVDAHAAVSTTVEQAGIEFDSARAGFVNGVLRTI
type: DOMAIN
name: NusB_RsmB_TIM44
description: NusB/RsmB/TIM44
Protein sequence:
MTEQIQPSETSPKSPEKPNKKHWVRKAVCIGSAVILVPVLGVAGALSFDAGQKSLIQLVDKMLDSFSVEQVEGGLQNGLVLKNVRYQTAGIETHIAQARLQLDFGCLFSREVCLRDFTLNKPTIAINTALLPPSAPDNSKSGSMKRISLPISINAENLVMQDLSVNIDQTSITLGNFKSAVSLNNEKGLTIAPTEINDISVIAKKLSEVKSEPKAEQPNKPVDWAAIEQSLTPAFLGNVSEIILPFDLHIPEISGKNWQYQAVNEKGETLQSVEMSSLIAQADTVDNQLQLQKLAVESSLGNLSSQGKLQLDGDMPLDLTLKSHLEPLKSDGKEILPASDVDLTLSGSLKKSTALSLKTKGVLDAELNGNVQLAQDKMPLNLTLNVAKGQYTFVNTMTPLKINDVTLKLTGDLLNYHAELKGDVAGMNYIPASQVELNADGKLYEVTVNKLGIDSLDGKSEFVGNANWKNGANWDIQADLEKMNIAFFVPVMPATLSGKLHSRGFAGSQGWQVEVPVADLNGMLSAKPISLKGSATLNQNVLLTVPDLQIKYGENYLKASGVLDDHSDFALDINAPNLRGLWSDLKGRVKGRVAISGQITTPNLDLDLTSSNLHLQGFQLAKASIKGHINNASLSSGKLNIKAEQLHYGGNIKLHLLDLDLSGDEQNHKLILKSQGEPVAANLQINGHFDRTLEQWKGTISQVKFETPIGDVKSNQAIAVSYDNKQTQANIASHCWQNTDVELCFPQAFNAGKQGNIPFQFKRVNLDLVNKLIEQNSLKGNLQVQGNVAWFTDKPFQFTANVDGNHLAFSQKLDYRTFKLYIPKLTLNADIQNNNLVLKTDINVHNQGRIVGDIHLNDLAKNRQLGGTLAIERLNLSIANQLLTSGESVNGEVVSKLSFGGNLEKPLLNGDFNIRNIRTKLKSMPVNITDGDIALRFNDNRSTLQGKIKTVDSHLNLTGRANWANIEHWTTELNAQANNFNVDIPSMAKLRFSPNITIKANPKELNLSGTVDIPWARIKIDSLPDTAEPVSEDEVILNGPHKSKEELIKREFAAKTKSGMEIRSDLRINIGKDVSLDAYGLKTNLDGLLSVKQDKGNLGLFGQINLTKGRYASFGQDLLIRKGLISFSGQATQPTLNIEAIRNPETMEDSKITAGVRVIGIADSPEVTIFSEPSKPQDQALSYLLTGRSLESSGEVGSTGSVGAALIGLGISKSGKLVGSIGEVFGIQDLNLGTSGVGDKSKVTVSGNITNRLQIKYGVGLFDGLAEVTLRYRLMPQLYFQSVSSTNQVFDLLYKFEF

Annotated regions:
Protein sequence:
MKALDKIREIVNKFSFNIREAQEIICHVLKIDKIQLYTENPEITSEQAHTIKSLIERRLKKEPLQYIIGECYFYNIKIKVGRGVLIPRPETEILVEQVLERQKLISNTGNRILDLCTGSGCIALAIGKNAPEFQIFGIDKSEKAVKYATENKALNNIKNVIFLVGDMFNPFKEKIFACITANPPYVKTDEISKLQPEIKNYEPLEALNGGEDGLNFYRKIIENAEKYLLNSGLIFLEIGQGQAKAVQNIALMSGFNVIEVVKDIAGIDRVMILQKSKSL

Annotated regions:
phrase: REAQEIICHVLKIDKIQLYTENPEITSEQAHTIKSLIERRLKKEPLQYII
type: DOMAIN
name: PrmC_N
description: Release factor glutamine methyltransferase, N-terminal domain

phrase: RQKLISNTGNRILDLCTGSGCIALAIGKNAPEFQIFGIDKSEKAVKYATENKALNNIKNVIFLVGDMFNPFKEKIFACITANPPYVKTD
type: DOMAIN
name: Small_mtfrase_dom
description: Methyltransferase small domain
Protein sequence:
MSDIEQRVKKIVAEQLGVAEADIKIESSFVDDLGADSLDTVELVMALEDEFEMEIPDEQAEKITTVQQAIDYAKAHVKA

Annotated regions:
phrase: DLGADSLDTVELVMA
type: PTM
name: Ppantetheine_attach_site
description: Phosphopantetheine attachment site

phrase: QRVKKIVAEQLGVAEADIKIESSFVDDLGADSLDTVELVMALEDEFEMEIPDEQAEKITTVQQAID
type: DOMAIN
name: PP-bd_ACP
description: Phosphopantetheine binding ACP domain

phrase: SDIEQRVKKIVAEQLGVAEADIKIESSFVDDLGADSLDTVELVMALEDEFEMEIPDEQAEKITTVQQAIDYAKAH
type: DOMAIN
name: PP-bd_ACP
description: Phosphopantetheine binding ACP domain
Protein sequence:
MQQIQVQLGDRSYPIYIGQDLMNDSELFARYLTNKKALIVSNDTIAPLYLQQIQQAMSACARIETVILPDGEKFKDLQHLDYIFTELLEHNFARDSVLVALGGGVVGDMTGFAAACYQRGIEFIQVPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQPKSVIIDTFCLQTLPANEFAAGMAEVIKYGIIWDADFFQWLEANVDALKSLQTDALNYAIAKCCQIKADVVAQDETEQGVRALLNLGHTFGHAIEAEMGYGVWLHGEAVSAGTVLAAQTAYKLNLLDEQSVERICRLMQAFDLPITAPESMGFEQFIKHMRRDKKVLGGKIRLVLPTEIGKADVFSDVSEDLLKQVISCV

Annotated regions:
phrase: VILPDGEKFKDLQHLDYIFTELLEHNFARDSVLVALGGGVVGDMTGFAAACYQRGIEFIQVPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQPKSVIIDTFCLQTLPANEF
type: DOMAIN
name: DHQS/DOIS_N
description: 3-dehydroquinate synthase, N-terminal domain

phrase: GMAEVIKYGIIWDADFFQWLEANVDALKSLQTDALNYAIAKCCQIKADVVAQDETEQGVRALLNLGHTFGHAIEAEMGYGVWLHGEAVSAGTVLAAQTAYKLNLLDEQSVERICRLMQAFDLPITAPESMGFEQFIKHMRRDKK
type: DOMAIN
name: DHQS_C
description: 3-dehydroquinate synthase, C-terminal domain
Protein sequence:
MDNHEEKRQRRVRYNGTHPKVFKEKYKELQPDKYADAVAKVIQKGSTPAGMHRSICVNEILEFLKITPGQTGLDATLGYGGHTLEMLKRLNSKGHLYAIDVDSIELPRTQERLEGLGYGSEILTIKQMNFSNIDQIALESGPLNFVLADLGVSSMQIDNPERGFSFKSEGPLDLRLNPNRGISAAARLKTISQDELQGMLLENADEPNSAAISRAIISEIKKGIDISTTTQLQQIIKDALKFIPQNTRKDEIKKSCQRCFQALRIDVNDEFEMLYEFLEKLPATLAEGGRVAILSFHSGEDRLVKKSFQRFFREGVYREIAPNFIRPSTEECNTNGRARSAKLRWAIKA

Annotated regions:
Protein sequence:
MSNSISSSTAPTPSFYGLDRDELSARMREQGLPAYRATQLFSWIYRKHLRSSEDMTNLPRGLRGSLGAICDLALPHAASVHSTPDGSTHKFVLELRDGRRVECVSMRAPRRLTFCLSSQVGCALKCSFCATGLMGLQRNLEAHEIVAQVLAMGDFHGWEDARFNLVFMGMGEPLANYRSVMHAVRILHEPDGLNLGIRRITVSTSGLVPQIRRLAEEGLALGLAVSLHATTDELRDQLVPVNRRWPIRELLEAAREYGERTGRRVTLEYTLIAGVNDRPEDADRLSGIARDLPSKINLIPYNPVPGLEWRRPSPEEVEGFAQRLYPRAPAVTVRHTMGGEIWAACGQLGGLTR

Annotated regions:
phrase: YGLDRDELSARMREQGLPAYRATQLFSWIYRKHLRSSEDMTNLPRGLRGSLGAI
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: APRRLTFCLSSQVGCALKCSFCATGLMGLQRNLEAHEIVAQVLAMGDFHGWEDARFNLVFMGMGEPLANYRSVMHAVRILHEPDGLNLGIRRITVSTSGLVPQIRRLAEEGLALGLAVSLHATTDELRDQLVPVNRRWPIRELLEAAREYGERTGRRVTLEYTLIAGVNDRPEDADRLSGIARDLPSKINLIPYNPVPGLEWRRPSPEEVEGFAQRLYPRAPAVTVRHTMGG
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SQVGCALKCSFCATGLMGLQRNLEAHEIVAQVLAMGDFHGWEDARFNLVFMGMGEPLANYRSVMHAVRILHEPDGLNLGIRRITVSTSGLVPQIRRLAEEGLALGLAVSLHATTDELRDQLVPVNRRWPIRELLEAAREYGERTGRRVTLEYTLIAGVNDRPE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LTFCLSSQVGCALKCSFCATGLMGLQRNLEAHEIVAQVLAMGDFHGWEDARFNLVFMGMGEPLANYRSVMHAVRILHEPDGLNLGIRRITVSTSGLVPQIRRLAEEGLALGLAVSLHATTDELRDQLVPVNRRWPIRELLEAAREYGERTGRRVTLEYTLIAGVNDRPEDADRLSGIARDLPSKINLIPYNPVPGLEWRRPSPEEVEGFAQRLY
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: PTPSFYGLDRDELSARMREQGLPAYRATQLFSWIYRKHLRSSEDMTNLPRGLRGSLGAICDLALPHAASVHSTPDGSTHKFVLELRDGRRVECVSMRAPRRLTFCLSSQVGCALKCSFCATGLMGLQRNLEAHEIVAQVLAMGDFHGWEDARFNLVFMGMGEPLANYRSVMHAVRILHEPDGLNLGIRRITVSTSGLVPQIRRLAEEGLALGLAVSLHATTDELRDQLVPVNRRWPIRELLEAAREYGERTGRRVTLEYTLIAGVNDRPEDADRLSGIARDLPSKINLIPYNPVPGLEWRRPSPEEVEGFAQRLYPRAPAVTVRHTMGGEIWAACGQL
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MSTVQVPKLNTKDLLTLEELTKEEIISLIEFAIYLKKNKQEPLLQGKILGLIFDKHSTRTRVSFEAGMVQLGGHGMFLSGKEMQMGRGETVSDTAKVLSQYIDGIMIRTFSHADVEELAKESSIPVINGLTDDHHPCQALADLMTIYEETNTFKGIKLAYVGDGNNVCHSLLLASAKVGMHMTVATPVGYEPNEEIVKKALAIAKETGAEIEVLHDPELAVNEADFIYTDVWMSMGQEGEEEKYSLFQPYQINNELVKHAKQTYRFLHCLPAHREEEVTGKIIDGPQSIVFEQAGNRLHAQKALLVSLFKNVEEPS

Annotated regions:
phrase: KGIKLAYVGDGNNVCHSLLLASAKVGMHMTVATPVGYEPNEEIVKKALAIAKETGAEIEVLHDPELAVNEADFIYTDVWMSMGQEGEEEKYSLFQPYQINNELVKHAKQTYRFLHCLPAHREEEVTGKIIDGPQSIVFEQAGNRLHAQKALLV
type: DOMAIN
name: Asp_carbamoyltransf_Asp/Orn-bd
description: Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain

phrase: KDLLTLEELTKEEIISLIEFAIYLKKNKQEPLLQGKILGLIFDKHSTRTRVSFEAGMVQLGGHGMFLSGKEMQMGRGETVSDTAKVLSQYIDGIMIRTFSHADVEELAKESSIPVINGLTDDHHPCQALADLMTIY
type: DOMAIN
name: Asp/Orn_carbamoyltranf_P-bd
description: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding
Protein sequence:
MRLWLCWLGCYTLLLWALRRRMWAGPARYLRSPLSRSLYANMMGSHGPPAPGAGENHQWYVCNTEQLSESLQPIFVQSYLDQGTQIFLNNSIEKSGWLFIQLYHSFVSSIFSLFMSRTSINGLLGRGSMFVFSPEQFQRLLKINPEWKSHRLLDLGAGDGEVTKVMSPHFEEIYATELSETMIWQLQKKKYRVLGINEWQNTGFQYDVISCLNLLDRCDQPLTVLKDTRSVLEPTRGRVILALVLPFHPYVENVGGKWEKPSEVLEIKGHTWEEQVNSLPEVFGKAGFAIEAFTRLPYLCEGDMYNDYYVLDDAVFVLKPV

Annotated regions:
Protein sequence:
MTIFDNYEVWFVIGSQHLYGPKTLRQVTQHAEHVVKALNTEAKLPCKLVLKPLGTSPDEITAICRDANYDDRCAGLVVWLHTFSPAKMWINGLSILNKPLLQFHTQFNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHAVVTGHWQDKEAHTRISAWMRQAVSKQDIRQLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDINALIDEYESSYTLTPATRIHGDKRQNVREAARIELGIKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFEKGNDLVLGSHMLEVCPSIAVEEKPLLDVQHLGIGGKEDPARLIFNTQTGSAIVASLIDLGDRYRLLVNCIDTVKTPHDLPKLPVANALWKAQPDLPTASEAWILAGGAHHTVFSHALDLNDMRQFAEMHDIEIAVIDNDTHLPGFKDALRWNDMYYSLKH

Annotated regions:
phrase: KVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNSISDGDINALIDEYESSYTLTPATRIHGDKRQNVREAARIELGIKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMST
type: DOMAIN
name: AraA_central
description: L-arabinose isomerase, central domain

phrase: GTSFMEDYTYHFEKGNDLVLGSHMLEVCPSIAVEEKPLLDVQHLGIGGKEDPARLIFNTQTGSAIVASLIDLGDRYRLLVNCIDTVKTPHDLPKLPVANALWKAQPDLPTASEAWILAGGAHHTVFSHALDLNDMRQFAEMHDI
type: DOMAIN
name: Ara_Isoase_C
description: L-arabinose isomerase, C-terminal

phrase: YEVWFVIGSQHLYGPKTLRQVTQHAEHVVKALNTEAKLPCKLVLKPLGTSPDEITAICRDANYDDRCAGLVVWLHTFSPAKMWINGLSILNKPLLQFHTQFNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHAVVTGHWQDKEAHTRISAWMRQAVSKQ
type: DOMAIN
name: AraA_N
description: L-arabinose isomerase, N-terminal domain
Protein sequence:
MEPHDSSHMDSEFRYTLFPIVYSIIFVLGVIANGYVLWVFARLYPCKKFNEIKIFMVNLTMADMLFLITLPLWIVYYQNQGNWILPKFLCNVAGCLFFINTYCSVAFLGVITYNRFQAVTRPIKTAQANTRKRGISLSLVIWVAIVGAASYFLILDSTNTVPDSAGSGNVTRCFEHYEKGSVPVLIIHIFIVFSFFLVFLIILFCNLVIIRTLLMQPVQQQRNAEVKRRALWMVCTVLAVFIICFVPHHVVQLPWTLAELGFQDSKFHQAINDAHQVTLCLLSTNCVLDPVIYCFLTKKFRKHLTEKFYSMRSSRKCSRATTDTVTEVVVPFNQIPGNSLKN

Annotated regions:
phrase: ANGYVLWVFARLYPCKKFNEIKIFMVNLTMADMLFLITLPLWIVYYQNQGNWILPKFLCNVAGCLFFINTYCSVAFLGVITYNRFQAVTRPIKTAQANTRKRGISLSLVIWVAIVGAASYFLILDSTNTVPDSAGSGNVTRCFEHYEKGSVPVLIIHIFIVFSFFLVFLIILFCNLVIIRTLLMQPVQQQRNAEVKRRALWMVCTVLAVFIICFVPHHVVQLPWTLAELGFQDSKFHQAINDAHQVTLCLLSTNCVLDPVI
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM
Protein sequence:
MSASQNIVVSETTMSSIIPNNNNNNNNSSSQKLPPCLISISKKKLLKNIDIINGGGQRINAWVDSMRASSPTHLKSLPSSISTQQQLNSWIMQHPSALEKFEQIMEASRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLAKCFPTAIVTGRCIDKVYNFVKLAELYYAGSHGMDIKGPAKGFSRHKRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKKWSELVLQVRSVLKKFPTLQLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVSKFPKDTDASYSLQDPSEVMDFLRRLVEWKQMQPRM

Annotated regions:
Protein sequence:
MALSVPPIAGAIIGYFTNDLAITMLFRPYKPIKIGQRTLPFTPGLIPANQERLARRISDAIMGSLLTPEELQKLTRRLLQTERVQAAIQWLLKMALDQVQSETEQKSAQVLAHILHDLLGSAIPRLIRVWARREDFLEAQLNQIFDQVLLELKLSEEQAGRIADWLLQVVLPPDRLRQTLIDFLTDRNIQVIDEDLREKTSGTYWVVANLFGVRNTLIRLRDFCIEEREACNVRLAELMDALGVRQRLIEGLQDLSLQNLPVATVRQLRKVFRQNVRIYIQSQGLELVKGLSDSLNWEHVSLSILNRLRSSTAVTASLEVVSQELALVLERYLERDLEIIVEKAIPILNLDEVIVERVKATTPQELEAAIQGIVKSELQAIVTLGGVLGLLIGIAQSVLLLVQGGL

Annotated regions:
Protein sequence:
MKKLNELISSLYEYKKTDSSNPLIKSIEMDSRLVKDGSLFICIEGYTVDGHDYAKQAVEKGAVAIISEKPLNVEVPVVIVKDTKRVMAIVANSFYDHPTKKLSLIGVTGTNGKTTTTHLIEKILNDANKKTGLIGTMYMKIANETFETKNTTPESLSLQQIFAEMVASKVDSAIMEVSSHALHLGRVRGCDFDIAVFTNLTQDHLDYHETMEAYRNAKGLLFAQLGNTYSNENRKIAVLNGDDKASKEYEKMTAAQIVTYGIDQECDVRATNIQIAAQGTTFDVDALGQKASVQLKMIGKFSVYNALAAMTACLVDGISLESIIHSLEAVEGVSGRFEPVDCGQSFTVIVDYAHTPDSLENVLNTVNEFAKGKSYVVVGCGGDRDKTKRPLMAKIASQLGDYVILTSDNPRSEKPEQIIKDMEVGLTEESNHISLIDRKEAITFAIQQAKENDVVVIAGKGHETYQIIGKETSFFDDRIVAADAIKEMLKSER

Annotated regions:
phrase: IKSIEMDSRLVKDGSLFICIEGYTVDGHDYAKQAVEKGAVAIISEKPLNVEVPVV
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: IGVTGTNGKTTTTHLIEKILNDAN
type: CONSERVED_SITE
name: Folylpolyglutamate_synth_CS
description: Folylpolyglutamate synthetase, conserved site

phrase: VTGTNGKTTTTHLIEKILNDANKKTGLIGTMYMKIANETFETKNTTPESLSLQQIFAEMVASKVDSAIMEVSSHALHLGRVRGCDFDIAVFTNLTQDHLDYHETMEAYRNAKGLLFAQLGNTYSNENRKIAVLNGDDKASKEYEKMTAAQIVTYGIDQECDVRATNIQIAAQGTTFDVDALGQKASVQLKMIGKFSVYNALAAMT
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRFEPVDCGQSFTVIVDYAHTPDSLENVLNTVNEFAKGKSYVVVGCGGDRDKTKRPLMAKIASQLGDYVILTSDNPRSEKPEQIIKDMEVGLTEESNHISLIDRKEAITFAIQQAKENDVVVIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MQRATAARLLDQFAGRRALCVGDILYDSFVYGEVRRVSREAPVPILSEIRRSAMLGGAGNLARNVESLGGQAILVGVVGNDAEGDAVRALLTSSAPDSAAGVLTDVSRCTPSKIRYVANGQQMFCVDRDPEAPIGSDTQERVLDAVRSRIDGADVVILSDYGRGLVSGDFARSLIDLARKSGVPVCVDPRGLDYTRYDGAYVIKPNADELSAETGLPVTDDQSAENALKTLKSRLPETDALLVTRGGQGMSLLAGNAAVAHHRARPRSVFDVSGAGDTALAALSLGVAAGLTLPDCMALADLAAGTAVGKAGTASVTPEEVLQDAAGGEKAPDWRVITRDTAATLADQWRREGLKIGFTNGCFDILHPGHLAVLRHAKSTCDRLIVGLNSDGSVQRLKGEDRPVNDQASRALMLASLEMVDRVVVFEEDTPQALIEALTPHVLIKGADYTADELPGARHIKAHGGEVVLAPLVEGLSTTNLVNKLAGRR

Annotated regions:
phrase: FTNGCFDILHPGHLAVLRHAKSTCDRLIVGLNSDGSVQRLKGEDRPVNDQASRALMLASLEMVDRVVVFEEDTPQALIEALTPHVLIKGADYTADELPG
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: RALCVGDILYDSFVYGEVRRVSREAPVPILSEIRRSAMLGGAGNLARNVESLGGQAILVGVVGNDAEGDAVRALLTSSAPDSAAGVLTDVSRCTPSKIRYVANGQQMFCVDRDPEAPIGSDTQERVLDAVRSRIDGADVVILSDYGRGLVSGDFARSLIDLARKSGVPVCVDPRGLDYTRYDGAYVIKPNADELSAETGLPVTDDQSAENALKTLKSRLPETDALLVTRGGQGMSLLAGNAAVAHHRARPRSVFDVSGAGDTALAALSLGVAAGLTLPDCMALADLAAGTAVGKAGTASVTPEEVL
type: DOMAIN
name: RfaE_dom_I
description: RfaE bifunctional protein, domain I

phrase: LADQWRREGLKIGFTNGCFDILHPGHLAVLRHAKSTCDRLIVGLNSDGSVQRLKGEDRPVNDQASRALMLASLEMVDRVVVFEEDTPQALIEALTPHVLIKGADYTADELPGARHIKAHGGEVVLAPLVEGLSTTNLVNK
type: DOMAIN
name: RfaE_dom_II
description: RfaE bifunctional protein, domain II

phrase: DVSGAGDTALAAL
type: CONSERVED_SITE
name: Carboh/pur_kinase_PfkB_CS
description: Carbohydrate/purine kinase, PfkB, conserved site

phrase: APVPILSEIRRSAMLGGAGNLARNVESLGGQAILVGVVGNDAEGDAVRALLTSSAPDSAAGVLTDVSRCTPSKIRYVANGQQMFCVDRDPEAPIGSDTQERVLDAVRSRIDGADVVILSDYGRGLVSGDFARSLIDLARKSGVPVCVDPRGLDYTRYDGAYVIKPNADELSAETGLPVTDDQSAENALKTLKSRLPETDALLVTRGGQGMSLLAGNAAVAHHRARPRSVFDVSGAGDTALAALSLGVAAGLTLPDCMALADLAAGTAVGKAGTASVT
type: DOMAIN
name: PfkB_dom
description: Carbohydrate kinase PfkB

phrase: IGFTNGCFDILHPGHLAVLRHAKSTCDRLIVGLNSDGSVQRLKGEDRPVNDQASRALMLASLEMV
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain