nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MDQFECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHLTNDTLGAFMRDNDFDTPVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQFPAEVAYGA

Annotated regions:
phrase: QEKEAVLVDIRDPQSFAMGHAVQAFHLTNDTLGAFMRDNDFDTPVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQFPAEV
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain

phrase: ADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHLTNDTLGAFMRDNDFDTPVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQ
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain

phrase: INVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHLTNDTLGAFMRDNDFDTPVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQFP
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain
Protein sequence:
MSSETPNHRDSVYERLLRERIIFLGSQVDDEIANELCAQILLLSAEDPTRDISLYINSPGGSVTAGMAIYDTMKYAPCDIATYGMGLAASMGQFLLSAGTKGKRYALPHARIMMHQPSAGVGGTAADIAIQAEQFAYTKREMAELIAEFTGQTVEQITKDSDRDRWFTAQQAKEYGFVDHVITSAKES

Annotated regions:
phrase: RYALPHARIMMHQ
type: ACTIVE_SITE
name: ClpP_His_AS
description: ClpP, histidine active site
Protein sequence:
MSGNSGASESISIEETNRIRISLGLKPLDISEEKPQKELSDASVKSSYVDQEQQAYENWKKQEQEEINRKKEEELKSKFEKLRQKNERRRRTQGKTLAETLAEEDDQIDANDTRAWILKMRNSSLNKNGNGLNFEAKNDAPRRSTLHSQNAGPNVNSSLEGMKIAHGFQDLNKNDGLVLTLKDADILDEDNHDLLENVEMVQRKTKNERKEDNPYKPYEDENDFLQQSEADQPSEDTFTTIGPQNSLTVNSTIEKHKSDNKKTFGTLVSFVEPTITGSEQSDYRQIKIKKSKKKKSKSDRRKRLVELDAENENENDPSDFVLPNGQSNSDLSVEQDSAIFKEQKKMKIQKRMRELETQSFADDDDLQQSIAMQRRLAQKRAKILKPEDVAEQLQNAEEVTDMTDSDTASGLIFDDTRAFVNSIKETENREALGSINEQAFEDSKDLNDTNSITGSSPTEESNALVEDTSVDISATLEEANTQQENAEDEPLVSDNVGAVLSLLRNKGVIKVSDEAKEKIQKEEEYNKWFARKQQARVELEEQRRKKKEQDRLSGKFEKMTQKEREQYAKKENERWDKKIAEIELEQFHDYKPQVDIKYVDEFGVELGPKEAYKYLLSHQFHGKGSGKAKTEKRLRRIVEKEREERKPIF

Annotated regions:
phrase: ESISIEETNRIRISLGLKP
type: CONSERVED_SITE
name: HIND
description: HIND motif
Protein sequence:
MQLPSSTKILVVGGGPAGSTAATLLAREGFEVTLVEKAIFPRYHIGESLLISVQPIIDLLGAREAVEAHGFQRKKGVLWEWGGERWLFDWKKLRYDYTFHVKREEFDEILLRNAQKNGVKVFEGIDISRLEFDGERPVAAKWSKSSTGESGTIQFEFLLDASGRAGLMATQYLRSRMFMKAFQNVATWGYWKGATIPEVEVEGPITVGSIPYGWIWGIPLRDQTMSVGLVIHQELFKEKRATQSVEEIYHEGLKASPLFQDVVLKGATLEPQIRTETDYSYISRTLAGPGFFLVGDSGAFIDPLLSSGVHLAMHSALLAAASVKSIIAGEVDMASATEFYQRCYQGHFLRWALIVASFYEVNARKETYFWTAQQLAHEELGVFNMSQADMKDVFATMVSGVVDLGDAQNAGRLQKGAERVHQYLDDDGREEDVTALLQKSKQRIFEYLDRVKNRDSRAAMQRYKAGGTETFSMGLDADGAVGGLYVTTEPRLGLLRKVVEERAEAATEAPAPAAPPPAVAEV

Annotated regions:
Protein sequence:
MEFCVLFGGASFEHEISIVSAIALKGVLKDRIKYFIFLDENHHFYLIEESNMHSKYFAQIKEKKLPPLILTHNGLLKNSFLGAKIIELPLVINLVHGGDGEDGKLASLLEFYRIAFIGPRIEASVLSYNKYLTKLYAKDLGVKTLDHVLLNEKNRANALDLMNFNFPFIIKPNNAGSSLGVNVVKEEKELVYALDGAFEYSKEVLIEPFIQGVKEYNLAGCKIKKDFCFSYVEEPNKQEFLDFKQKYLDFSRNKAPKANLSNALEEQLKENFKKLYNDLFDGAIIRCDFFVIKNEVYLNEINPIPGSLANYLFDDFKTTLENLAQSLPKTPKIQIKNSYLLQIQKNK

Annotated regions:
phrase: FCVLFGGASFEHEISIVSAIALKGVLKDRIKYFIFLDENHHFYLIEESNMHSKYFAQIKEKKLPPLILTHNGLLKNSFLGAKIIELPLVINLVHGGDGEDGKLASLLEFYRIAFIG
type: DOMAIN
name: Dala_Dala_lig_N
description: D-alanine--D-alanine ligase, N-terminal domain

phrase: LFDGAIIRCDFFVIKNEVYLNEINPIP
type: CONSERVED_SITE
name: D-Ala_lig_Van_CS
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site

phrase: HGGDGEDGKLA
type: CONSERVED_SITE
name: D-Ala_lig_Van_CS
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site

phrase: GVKTLDHVLLNEKNRANALDLMNFNFPFIIKPNNAGSSLGVNVVKEEKELVYALDGAFEYSKEVLIEPFIQGVKEYNLAGCKIKKDFCFSYVEEPNKQEFLDFKQKYLDFSRNKAPKANLSNALEEQLKENFKKLYNDLFDGAIIRCDFFVIKNEVYLNEINPIP
type: DOMAIN
name: Dala_Dala_lig_C
description: D-alanine--D-alanine ligase, C-terminal

phrase: KLYAKDLGVKTLDHVLLNEKNRANALDLMNFNFPFIIKPNNAGSSLGVNVVKEEKELVYALDGAFEYSKEVLIEPFIQGVKEYNLAGCKIKKDFCFSYVEEPNKQEFLDFKQKYLDFSRNKAPKANLSNALEEQLKENFKKLYNDLFDGAIIRCDFFVIKNEVYLNEINPIPGSLANYLFDDFKTTLENLAQSLPKTP
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold
Protein sequence:
MNINISDLLNGNYILLLFVVLALGLCLGKLRLGSVQLGNSIGVLVVSLLLGQQHFSINTDALNLGFMLFIFCVGVEAGPNFFSIFFRDGKNYLMLALVMVGSALLIALGLGKLFGWDIGLTAGMLAGSMTSTPVLVGAGDTLRHSGIASPQLSSALDNLSLGYALTYLIGLVSLIVGARYLPKLQHQDLQTSAQQIARERGLDTDANRKVYLPVIRAYRVGPELVAWTDGKNLRELGIYRQTGCYIERIRRNGILANPDGDAVLQMGDEIALVGYPDAHARLDPSFRNGKEVFDRDLLDMRIVTEEIVVKNHNAVGRRLAQLKLTDHGCFLNRVIRSQIEMPIDDNVVLNKGDVLQVSGDARRVKTIADRIGFISIHSQVTDLLAFCAFFIIGLMIGMITFQFSNFSFGIGNAAGLLFAGIMLGFLRANHPTFGYIPQGALNMVKEFGLMVFMAGVGLSAGSGINNGLGAVGGQMLIAGLVVSLVPVVICFLFGAYVLRMNRALLFGAMMGARTCAPAMEIISDTARSNIPALGYAGTYAIANVLLTLAGTLIVIIWPELG

Annotated regions:
phrase: LALGLCLGKLRLGSVQLGNSIGVLVVSLLLGQQHFSINTDALNLGFMLFIFCVGVEAGPNFFSIFFRDGKNYLMLALVMVGSALLIALGLGKLFGWDIGLTAGMLAGSMTSTPVLVGAGDTLRHSGIASPQLSSALDNLSLGYALTYL
type: DOMAIN
name: YidE_YbjL
description: YidE/YbjL duplication

phrase: IIGLMIGMITFQFSNFSFGIGNAAGLLFAGIMLGFLRANHPTFGYIPQGALNMVKEFGLMVFMAGVGLSAGSGINNGLGAVGGQMLIAGLVVSLVPVVICFLFGAYVLRMNRALLFGAMMGARTCAPAMEIISDTARSNIPALGYAGTYA
type: DOMAIN
name: YidE_YbjL
description: YidE/YbjL duplication

phrase: AFCAFFIIGLMIGMITFQFSNFSFGIGNAAGLLFAGIMLGFLRANHPTFGYIPQGALNMVKEFGLMVFMAGVGLSAGSGINNGLGAVGGQMLIAGLVVSLVPVVICFLFGAYVLRMNRALLFGAMMGARTCAPAMEIISDTARSNIPALGYAGTYAIANVLLTLAGTLI
type: DOMAIN
name: YidE_YbjL
description: YidE/YbjL duplication

phrase: LFVVLALGLCLGKLRLGSVQLGNSIGVLVVSLLLGQQHFSINTDALNLGFMLFIFCVGVEAGPNFFSIFFRDGKNYLMLALVMVGSALLIALGLGKLFGWDIGLTAGMLAGSMTSTPVLVGAGDTLRHSGIASPQLSSALDNLSLGYALTYLIGLVSLIVGARYL
type: DOMAIN
name: YidE_YbjL
description: YidE/YbjL duplication

phrase: VFDRDLLDMRIVTEEIVVKNHNAVGRRLAQLKLTDHGCFLNRVIRSQIEMPIDDNVVLNKGDVLQVSGDARRVKTIADRIG
type: DOMAIN
name: RCK_C
description: Regulator of K+ conductance, C-terminal

phrase: DGKNLRELGIYRQTGCYIERIRRNGILANPDGDAVLQMGDEIALVGYPDAHAR
type: DOMAIN
name: RCK_C
description: Regulator of K+ conductance, C-terminal

phrase: TEEIVVKNHNAVGRRLAQLKLTDHGCFLNRVIRSQIEMPIDDNVVLNKGDVLQVSGDARRVKTIADR
type: DOMAIN
name: RCK_C
description: Regulator of K+ conductance, C-terminal

phrase: RGLDTDANRKVYLPVIRAYRVGPELVAWTDGKNLRELGIYRQTGCYIERIRRNGILANPDGDAVLQMGDEIALVGYPDAHARLDPSFR
type: DOMAIN
name: RCK_C
description: Regulator of K+ conductance, C-terminal
Protein sequence:
MSLFFTCLIVFLGVCSGCQHPICQCSGRVFICLESKVIQVPQDIPRNSTELRFVLTKMRVISSGAFSGFGELEKIEITQNDALEVIQANVFSDLPKLHEIRIEKANNLVYIDQEAFQTLPNLRYLFISNTGIKFLPAVNKIQSFHSVILDIQDNINIRKIESNSFAGLSLESVIIRLNKNGIREIENHAFNGTYLDELNLSDNYNLEKLPNNVFEGANGPLVLDISRTRISFLPISGLENITKLRARSAYNLKKLPALEKFVALIEANLTYPSHCLVHVACSPKPDAFNPCEDIMGYNFLRVLIWFINILAITGNIVVLFILTTSQYKLTVPRFLMCNLACADLCIGIYLLLIAIEDIKTKSQYYNHAIDWQTGSRCNTAGFLTVFASELSVYTLTVITLERWYTIAYAMQLDRKVRFRHAMVIMIFGWVFAFTMALLPIFGVSSFTKVSICLPMDIETPISQAYIIFLLVLNVLAFVIICACYIRIYFTVRNPNVISSNSDTKIAKRMAILIFTDFLCMAPISFFAISASLKVPLITVSNSKILLVLFYPINSCANPFLYAIFTKNFRRDFFILLSKFGCCEMQAQIYRTETSSSVHNSHVRNGHYAPAPKISDGTLYSLVPLNHSN

Annotated regions:
phrase: INIRKIESNSFAGLSLESVIIRLNKNGIREIENHAFNGTYLDELNLSDNYNLEKLPNNVFE
type: REPEAT
name: LRR_5
description: BspA-type LRR region

phrase: KMRVISSGAFSGFGELEKIEITQNDALEVIQANVFSDLPKLHEIRIEKANNLVYIDQEAFQTLPNLRYLFISN
type: REPEAT
name: LRR_5
description: BspA-type LRR region

phrase: GNIVVLFILTTSQYKLTVPRFLMCNLACADLCIGIYLLLIAIEDIKTKSQYYNHAIDWQTGSRCNTAGFLTVFASELSVYTLTVITLERWYTIAYAMQLDRKVRFRHAMVIMIFGWVFAFTMALLPIFGVSSFTKVSICLPMDIETPISQAYIIFLLVLNVLAFVIICACYIRIYFTVRNPNVISSNSDTKIAKRMAILIFTDFLCMAPISFFAISASLKVPLITVSNSKILLVLFYPINSCANPFL
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM
Protein sequence:
MGRFIFVSFGLLVLFLSLSGTGAGLHCPSDWYYYDQHCYRIFNEEMNWEDAEWFCTKQAKGAHLVSIKSAKEADFVAWMVTQNIEESFSHVSIGLRVQNKEKQCSTKWSDGSSVSYDNLLDLYITKCSLLKKETGFRKWFVASCIGKIPFVCKFPPQC

Annotated regions:
phrase: YDQHCYRIFNEEMNWEDAEWFCTKQAKGAHLVSIKSAKEADFVAWMVTQNIEESFSHVSIGLRVQNKEKQCSTKWSDGSSVSYDNLLDLYITKCSLLKKETGFRKWFVASCIGKIPFVC
type: DOMAIN
name: C-type_lectin-like
description: C-type lectin-like

phrase: EMNWEDAEWFCTKQAKGAHLVSIKSAKEADFVAWMVTQNIEESFSHVSIGLRVQNKEKQCSTKWSDGSSVSYDNLLDLYITKCSLLKKETGFRKWFVASCIGKIPFVCK
type: DOMAIN
name: C-type_lectin-like
description: C-type lectin-like

phrase: CPSDWYYYDQHCYRIFNEEMNWEDAEWFCTKQAKGAHLVSIKSAKEADFVAWMVTQNIEESFSHVSIGLRVQNKEKQCSTKWSDGSSVSYDNLLDLYITKCSLLKKETGFRKWFVASCIGKIPFVC
type: DOMAIN
name: C-type_lectin-like
description: C-type lectin-like
Protein sequence:
MVFPSPLQGVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGREGKTAVVVGTITDDVRVQEVPKLKVCALRVSSRARSRILKAGGKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARGRRASRGYKN

Annotated regions:
phrase: GVDIRHNKDRKVRRKEPKSQDIYLRLLVKLYRFLARRTNSTFNQVVLKRLFMSRTNRPPLSLSRMIRKMKLPGREGKTAVVVGTITDDVRVQEVPKLKVCALRVSSRARSRILKAGGKILTFDQLALDSPKGCGTVLLSGPRKGREVYRHFGKAPGTPHSHTKPYVRSKGRKFERARGRRASRGYK
type: DOMAIN
name: Ribosomal_uL15/eL18
description: Large ribosomal subunit protein uL15/eL18

phrase: KRLFMSRTNRPPLSLSR
type: CONSERVED_SITE
name: Ribosomal_eL18/eL18-A/B/_CS
description: Large ribosomal subunit protein eL18, conserved site
Protein sequence:
MNKNINILNISTSKINLLDLNRQDLKNFLISLGEIKSFCTEQIMKWIYTHYCNDFNKMFNISIKTRNKLCKKSYIFAPKFTEEKISHDGTIKWITSINNQKIETVYIPEEKRSTLCVSSQIGCCLQCHFCATGKEGFQRNLKVSEIVAQIWQANKTLKEKNITNRITNIVFMGMGEPLLNLNNVVSALKIILDKYGFSLSKRRVTLSTSGIAPALDKLRNMIDISLAISLHAPNDVIRNLIMPINRKYNISAILNSALKYLKFSNANRGGVTIEYVMLDGINDSNENAQQLATLLSKIPSKINLIPWNSFLGASFLCSNIHRINIFANILRKKGFSVMIRKNRGQDINAACGQLTSNIINHLTK

Annotated regions:
phrase: SQIGCCLQCHFCATGKEGFQRNLKVSEIVAQIWQANKTLKEKNITNRITNIVFMGMGEPLLNLNNVVSALKIILDKYGFSLSKRRVTLSTSGIAPALDKLRNMIDISLAISLHAPNDVIRNLIMPINRKYNISAILNSALKYLKFSNANRGGVTIEYVMLDGINDSN
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: EEKRSTLCVSSQIGCCLQCHFCATGKEGFQRNLKVSEIVAQIWQANKTLKEKNITNRITNIVFMGMGEPLLNLNNVVSALKIILDKYGFSLSKRRVTLSTSGIAPALDKLRNMIDISLAISLHAPNDVIRNLIMPINRKYNISAILNSALKYLKFSNANRGGVTIEYVMLDGINDSNENAQQLATLLSKIPSKINLIPWNSFLGASFLCSNIHRINIFANILRKKGFSVMIRKNRGQ
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TSKINLLDLNRQDLKNFLISLGEIKSFCTEQIMKWIYTHYCNDFNKMFNISIKTRNKLCKKSYIFAPKFTEEKISHDGTIKWITSINNQKIETVYIPEEKRSTLCVSSQIGCCLQCHFCATGKEGFQRNLKVSEIVAQIWQANKTLKEKNITNRITNIVFMGMGEPLLNLNNVVSALKIILDKYGFSLSKRRVTLSTSGIAPALDKLRNMIDISLAISLHAPNDVIRNLIMPINRKYNISAILNSALKYLKFSNANRGGVTIEYVMLDGINDSNENAQQLATLLSKIPSKINLIPWNSFLGASFLCSNIHRINIFANILRKKGFSVMIRKNRGQDINAACGQLTSN
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: INLLDLNRQDLKNFLISLGEIKSFCTEQIMKWIYTHYCNDFNKMFNISIKTRNKLCKKSY
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MNIYYDKNADLNIIKDMKVAIVGYGSQGHAHANNLRDSNVEVVVALRDGSASSKKASDAGLNVKSIKQATAWADLIMVLAPDEFQAQIYTDSIEPNLKQGATLAFAHGFNIHYNRIIPRADLDVIMIAPKAPGHTVRSEFVKGGGIPDLIAVFQDVSGNAKDTALSYASAIGGGRTGILETSFKDETETDLFGEQVVLCGGTTALVQAGFETLVEAGYEPEMAYFECLHELKLIVDLMYEGGIANMRYSISNTAEYGDITRGSRIVTADTKDEMKKILIEIQNGVFAKEFVANVGELPAHREVQRAHQIEQVGESLRSMMPWINKNKIVDQSKN

Annotated regions:
phrase: MNIYYDKNADLNIIKDMKVAIVGYGSQGHAHANNLRDSNVEVVVALRDGSASSKKASDAGLNVKSIKQATAWADLIMVLAPDEFQAQIYTDSIEPNLKQGATLAFAHGFNIHYNRIIPRADLDVIMIAPKAPGHTVRSEFVKGGGIPDLIAVFQDVSGNAKDTALSYASAIGGGRTGILE
type: DOMAIN
name: KARI_N
description: Ketol-acid reductoisomerase, N-terminal

phrase: IKDMKVAIVGYGSQGHAHANNLRDSNVEVVVALRDGSASSKKASDAGLNVKSIKQATAWADLIMVLAPDEFQAQIYTDSIEPNLKQGATLAFAHGFNIHYNRIIPRADLDVIMIAPKAPGHTVRSEFVKGGGIPDLIAVFQDVSGNAKDTALSYASAIGGGRT
type: DOMAIN
name: KARI_N
description: Ketol-acid reductoisomerase, N-terminal

phrase: SFKDETETDLFGEQVVLCGGTTALVQAGFETLVEAGYEPEMAYFECLHELKLIVDLMYEGGIANMRYSISNTAEYGDITRGSRIVTADTKDEMKKILIEIQNGVFAKEFVANVGELPAHREVQRAHQIEQVGESLRSMMPW
type: DOMAIN
name: KARI_C
description: Ketol-acid reductoisomerase, C-terminal

phrase: FKDETETDLFGEQVVLCGGTTALVQAGFETLVEAGYEPEMAYFECLHELKLIVDLMYEGGIANMRYSISNTAEYGDITRGSRIVTADTKDEMKKILIEIQNGVFAKEFVANVGELPAHREVQRAHQIEQVGESLRSMMP
type: DOMAIN
name: KARI_C
description: Ketol-acid reductoisomerase, C-terminal
Protein sequence:
MLVLGIESSCDETGLALYDTQRGLLAHALHSQIAMHREYGGVVPELASRDHIRRALPLLEEVMAQSGTHRDDIDAIAFTQGPGLAGALLVGASIANALALAWNKPTVGIHHLEGHLLSPLLVDEPPPFPFIALLVSGGHTQLMRVTDVGVYETLGETLDDAAGEAFDKTAKLIGLGYPGGPEVSKLAETGTPGAVVLPRPMLHSGDLDFSFSGLKTAVLTQMKKFEAAKLESEALERAKADLARGFVDAAVDVLVAKSLAALKQTKLKRLVVAGGVGANRQLRAALSAAAAKRGFDVHYPDLALCTDNGAMIALAGALRLGRWPEQANADYAFTVKPRWDLASLAR

Annotated regions:
phrase: MLVLGIESSCDETGLALYDTQRGLLAHALHSQIAMHREYGGVVPELASRDHIRRALPLLEEVMAQSGTHRDDIDAIAFTQGPGLAGALLVGASIANALALAWNKPTVGIHHLEGHLLSPLLVDEPPPFPFIALLVSGGHTQLMRVTDVGVYETLGETLDDAAGEAFDKTAKLIGLGYPGGPEVSKLAETGTPGAVVLPRPMLHSGDLDFSFSGLKTAVLTQMKKFEAAKLESEALERAKADLARGFVDAAVDVLVAKSLAALKQTKLKRLVVAGGVGANRQLRAALSAAAAKRGFDVHYPDLALCTDNGAMIALAGALRLGRWPEQANADYAFTVKPRWDL
type: DOMAIN
name: Gcp-like_dom
description: Gcp-like domain

phrase: LLAHALHSQIAMHREYGGVVPELASRDHIRRALPLLEEVMAQSGTHRDDIDAIAFTQGPGLAGALLVGASIANALALAWNKPTVGIHHLEGHLLSPLLVDEPPPFPFIALLVSGGHTQLMRVTDVGVYETLGETLDDAAGEAFDKTAKLIGLGYPGGPEVSKLAETGTPGAVVLPRPMLHSGDLDFSFSGLKTAVLTQMKKFEAAKLESEALERAKADLARGFVDAAVDVLVAKSLAALKQTKLKRLVVAGGVGANRQLRAALSAAAAKRGFDVHYPDLALCTDNGAMI
type: DOMAIN
name: Gcp-like_dom
description: Gcp-like domain
Protein sequence:
AAWNHWAESNTEPHVENITLYQNQEDISTVASKEDVMSQTSGKSHAASDAPEHLTLFTETADARGRNGSSSRTDFTISSVGYSLEIATALTSQSGALASESLHLPSSSSEFDERIAPLQAKSGTTSEMGTERAMGLSEEVTVHSREATTSASSPSSLPALEMGELATPPQKRNSSGPDLSWLHFSRTLASSPLSDHSSCECQIPSLTLGSHSNCGVLTFLLLQLLLITQGFQSLSSTTWSSFSDSTLQSGGSDTALGDRSYSESSSTSSSESLNSSPPREERSITGISYGQVSGTAIEQRTSSDHTDHTYLSSTFTKGERALLSITDNSSSSDIVESSTSYMKISNSSHSDDSSFSYAQTDRSNISSYDGEYAQPSTELPVLHTSNLPSYTPTINMPNTSVVLDTDAGFAGDSYSSSSSSSSSSSSSSAAASSSSSGPPLPLPSVSESHHLFSSILPSTRASMHPLKSTADAPTPLSSSPSPLPVSLTASTSAALSVSQTPLPPSSSTPVLPRARETPVTSVQTSTTTSFMTMLHSSQTIDLKNQSTLHQEKIVTESKSPSPVSLPTESTKAVTTSSPLPPSLTESPTEQTLPATGTNLAQMSPAFTTTILKTSQPPVTTPGTLSSTASLATGPTALQTTAGKQLLPTHPEILVPQTSTDGGISTERNQVNVDATTRLIPLTSVPTSAKELTTRLGITAEYSPASHSLGTSSPQTTDVSTAKALAPKSATFAVHSSTWSTTTLSSSASVNSCAINPCLHDGKCITDNT

Annotated regions:
Protein sequence:
MNEPAKHRLGCTRTPEPDIRLRKGHQLDDTRGSNNDNYQGDLEPSLETPVCSSYYENSPEEPECHDDNSQEDEGFMGMSPLLQAHHAMERMEEFVCKVWEGRWRVIPHDVLPDWLKDNDFLLHGHRPPMPSFRACFKSIFRIHTETGNIWTHLLGCVFFLCLGIFYMFRPNISFVAPLQEKVVFGLFFLGAILCLSFSWLFHTVYCHSEGVSRLFSKLDYSGIALLIMGSFVPWLYYSFYCNPQPCFIYLIVICVLGIAAIIVSQWDMFATPQYRGVRAGVFVGLGLSGIIPTLHYVISEGFLKAATIGQIGWLMLMASLYITGAALYAARIPERFFPGKCDIWFHSHQLFHIFVVAGAFVHFHGVSNLQEFRFMIGGGCTEEDAL

Annotated regions:
Protein sequence:
MAEKRNIFLVGPMGAGKSTIGRQLAQQLNMEFFDSDQEIERRTGADVGWVFDVEGEEGFRDREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVYLETTIEKQLARTQRDKKRPLLQVDEPPREVLEALAKERNPLYEEIADVTIRTDDQSAKVVANQIINMLESN

Annotated regions:
phrase: RDREEKVINELTEKQGIVLATGGGS
type: CONSERVED_SITE
name: Shikimate_kinase_CS
description: Shikimate kinase, conserved site
Protein sequence:
MQVAAIFIDAEIEDQAQELRKFFKKLGAEISEDKSSKGIEDDLHKIIGVCDVCFKDPSLHTVEEIDAVLNSVVSIIVSIPLERGENLILAFCEKMTKAPDQKLAQVCLQSLWRLFSNLELTSPLRYHVYYHLVQVAKQVDQVKEVFTGVEQLKNQFTQCPPSNEQMQKLYRLLHDVLKDTNSELASKVMIELLGTYTAENASYAREDAMKCIVTALADPNTFLLDPLLSLKPVRFLEGELIHDLLSVFVSEKLPAYLQFYQNHKEFVNSQGLNHEQNIKKMRLLSFMQLAESNPEMTFAQLQDELQIGENDVEPFIIEVLKTKLVRARMDQKARKVHISSTMHRTFGRPQWQQLRDLLHAWKANLTLVQENMKSVAEAQIELTRKQ

Annotated regions:
phrase: RTFGRPQWQQLRDLLHAWKANLTLVQ
type: DOMAIN
name: eIF3m_C_helix
description: eIF3 subunit M, C-terminal helix domain

phrase: QNHKEFVNSQGLNHEQNIKKMRLLSFMQLAESNPEMTFAQLQDELQIGENDVEPFIIEVLKTKLVRARMDQKARKVHI
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain

phrase: NSELASKVMIELLGTYTAENASYAREDAMKCIVTALADPNTFLLDPLLSLKPVRFLEGELIHDLLSVFVSEKLPAYLQFYQNHKEFVNSQGLNHEQNIKKMRLLSFMQLAESNPEMTFAQLQDELQIGENDVEPFIIEVLKTKLVRARMDQKARKVHISSTM
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain

phrase: LNHEQNIKKMRLLSFMQLAESNPEMTFAQLQDELQIGENDVEPFIIEVLKTKLVRARMDQKARKVHISSTMHRTFGRPQWQQLRDLLHA
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain
Protein sequence:
MSSKQEIMDDQRFRRVSKDPRFWEMPEKDRKVKIDKRFRAMFHDKKFKLNYAVDKRGRPISHSTTEDLKRFYDLSDSDSDLSDEESKVLDEKRVKEKKKQTKKETKSKTPIEEKKKETKKTDQKDSINKNDLNNSERIQKMKNSHKSPKIDSEVSPKDSEESLQSRKKKRDTTDLSVEASPKGKLRTKDPSTSAMVKSSTVSGSKAKREKQAVIMAKDNAGRMLHEEAPEEDSDSASELGRDEESEGEITSDDRASADDDENEDEEEEEDGEEEEEEEEEEDESDDESDSGPDLARGKGNVETSSEDEDDLADLFPEEPGFEHAWRELDKDAPRADEITRRLAVCNMDWDRLKAKDLLALFNSFKPKGGVVFSVKIYPSEFGKQRMKEEQIQGPVELLSIPEDAPEKDWASREKLRDYQFKRLKYYYAVVECDSPETASKIYEDCDGLEFESSCSFIDLRFIPDDITFDDEPKDAASEVDLTAYKPKYFTSAAMGTSTVEITWDETDHERITTLNRKFKKDELLDMDFEAYLASSSEDEEEVEEAPEGEDGVSIEDGKTKKSQKDDEEQIAKYRQLLQVIQEKEKKGKENDMEMEIKWVPGLKESAEEMVKNKLEGKDKLTPWEQFLEKKKEKKRLKKKQKALAEEASEDEIPSDVDLNDPYFAEEVKKIGIKKKSMKSAKDGATSEEETELEKQKAEMALLVMDEEEDSKKHFNYDKIVEHQNLSKKKKKQLMKKKELLEDDFEVNVSDARFQAMYTSHLFNLDPSDPNFKKTKAMEKILEEKARHREQKEERLIQAVERAQQDTGKPAQKQPMDPALSMLIKSVKNKTEQFQARKKQRIK

Annotated regions:
phrase: DARFQAMYTSHLFNLDPSDPNFKKTKAM
type: DOMAIN
name: NUC153
description: NUC153

phrase: TRRLAVCNMDWDRLKAKDLLALFNSFKPKGGVVFSVKIYPSEFGKQRMKEEQIQGPVELLSIPEDAPEKDWASREKLRDYQFKRLKYYYAVVECDSPETASKIYEDCDGLEFESSCSFIDLRFIPDDITFDDEPKDA
type: DOMAIN
name: RRM_ESF1
description: ESF1, RRM domain
Protein sequence:
MRKFLKYQLDVPSINSEDKNRTVVKIAPLEIGFGDTLGNALRRICLSSIPGASMFAVKFGGYSHEFQPYEGVKEDITHIILNLKNLAIKIDELIYSEDYFNNLLIDKWPKMKINFKGPGVITAKDIVCPVGFEIVNQDLYIAEVTKPIDVEIEIFAKTGRGRVDFNTNKDFVSTLHIIATDSNYSPVLHYAYNVEMIKDSKSSMSEILTIDIATNGTISGSEAIAIAAKIMQAHLEPIVNIDKTINEMIIMREREEEEKRQNASISIDDLDLTVRAYNALKQSGINTTAELIELTKSQLEKIKNLGRKSVTEIIQKLTERSLELKKD

Annotated regions:
phrase: VKFGGYSHEFQPYEGVKEDITHIILNLKNLAIKIDELIYSEDYFNNLLIDKWPKMKINFKGPGVITAKDIVCPVGFEIVNQDLYIAEVTKPIDVEIEIFAKTGRGRVDFNTNKDFVSTLHIIATDSNY
type: DOMAIN
name: DNA-dir_RNA_pol_insert
description: DNA-directed RNA polymerase, insert domain

phrase: RTVVKIAPLEIGFGDTLGNALRRICLSSIPGASMFAVKFGGYSHEFQPYEGVKEDITHIILNLKNLAIKIDELIYSEDYFNNLLIDKWPKMKINFKGPGVITAKDIVCPVGFEIVNQDLYIAEVTKPIDVEIEIFAKTGRGRVDFNTNKDFVSTLHIIATDSNYSPVLHYAYNVEMIKDSKSSMSEILTIDIATNGTISGSEAIAIAAKIMQAHLEPIVN
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: EEEEKRQNASISIDDLDLTVRAYNALKQSGINTTAELIELTKSQLEKIKNLGRKSVTEIIQKLT
type: DOMAIN
name: RNAP_asu_C
description: RNA polymerase, alpha subunit, C-terminal

phrase: PLEIGFGDTLGNALRRICLSSIPGASMFAVKFGGYSHEFQPYEGVKEDITHIILNLKNLAIKIDELIYSEDYFNNLLIDKWPKMKINFKGPGVITAKDIVCPVGFEIVNQDLYIAEVTKPIDVEIEIFAKTGRGRVDFNTNKDFVSTLHIIATDSNYSPVLHYAYNVEMIKDSKSSMSEILTIDIATNGTISGSEAIAIAAKIMQAH
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type
Protein sequence:
MKARLQTSLGQQLVMTPQLRQAIKLLQMSTTELEVEIAEAVETNPLLEWADEAAHAASDIAVDSSPSASTEQPQREEVAPAERDEDWSQDELQWTGSGSGGSFDDDESGDAAERVAESETLADHLLWQLHLSPLSPRDRQIGAMLIDALDEDGYLREPLSAILETLALGAAVDEADVLTVLHQIQRFDPVGVGARTLGECLALQLGVLDADTPGRELALQIVAGPLERLPRSGVAGLAHELKRSTADVEQAVQLVRSLDPRPGKQIGDLSQDTYVVPDCVIWRQRGVWRAALAGRAQPKVTIHRGYENLIRSCGESDAGYLRGQLQEARWLLKSLEARGETLLRVVRCLLEHQAGFLEFGAQALRPLTLREIAGELGLHESTISRAIARKYVRTPRGTIALRAFFASGIDTDSGGEASSTAIQAMIRRLIDAENPRKPLSDAKLADLLKTSGVPVARRTVAKYREAMNISASHERVRIA

Annotated regions:
phrase: YLRGQLQEARWLLKSLEARGETLLRVVRCLLEHQAGFLEFGAQALRPLTLREIAGELGLHESTISRAIARKYVRTPRGTIALRAFFASGIDTDSGGEASSTAIQAMIRRLIDAENPRKPLSDAKLADLLKTSGVPVARRTVAKYREAMNISASHER
type: DOMAIN
name: RNA_pol_sigma_54_DNA-bd
description: RNA polymerase sigma factor 54, DNA-binding

phrase: ERVAESETLADHLLWQLHLSPLSPRDRQIGAMLIDALDEDGYLREPLSAILETLALGAAVDEADVLTVLHQIQRFDPVGVGARTLGECLALQLGVLDADTPGRELALQIVAGPLERLPRSGVAGLAHELKRSTADVEQAVQLVRSLDPRPGKQIGDLSQDTYVVPDCVIWRQRGVWRAALAGRAQPKVTIHRG
type: DOMAIN
name: RNA_pol_sigma_54_core-bd
description: RNA polymerase sigma factor 54, core-binding domain
Protein sequence:
MASRIADSLFAFTGPQQCLPRAPKLASARLSPGVYAVRPIDLLLKGTRRTFLVPAKKRIGCIKAVFVPVAPPSADNAEDREQLAESYGFKQIGQDLPDNVTLKDIMDTLPKEVFEIDDVKAWKSVLISVTSYALGLFMIAKAPWYLLPLAWAWTGTAVTGFFVIGHDCAHKSFSKNKLVEDIVGTLAFLPLVYPYEPWRFKHDRHHAKTNMLVHDTAWQPVPPEEFDSSPVLRKAIIFGYGPIRPWLSIAHWVNWHFNLRKFRPSEVNRVKISLACVFAFMAVGWPLIIYKVGVLGWVKFWLMPWLGYHFWMSTFTMVHHTAPHIPFKPADEWNAAQAQLNGTVHCDYPSWIEILCHDINVHIPHHISPRIPSYNLRAAHQSIQENWGKYTNLATWNWRLMKTIMTVCHVYDKEENYIPFDRLAPEESQPITFLKKAMPDYAA

Annotated regions:
phrase: PWYLLPLAWAWTGTAVTGFFVIGHDCAHKSFSKNKLVEDIVGTLAFLPLVYPYEPWRFKHDRHHAKTNMLVHDTAWQPVPPEEFDSSPVLRKAIIFGYGPIRPWLSIAHWVNWHFNLRKFRPSEVNRVKISLACVFAFMAVGWPLIIYKVGVLGWVKFWLMPWLGYHFWMSTFTMVHHTAPHIPFKPADEWNAAQAQLNGTVHCDYPSWIEILCHDINVHIPHHISPRIPSYNLRAAHQSIQENWGK
type: DOMAIN
name: FA_desaturase_dom
description: Fatty acid desaturase domain
Protein sequence:
MKRIKRILAVLTIFALLATINAFTFVSLAQTNTIEIIIGNVKARPGDRIEVPVSLKNVPDKGIVSSDFVIEYDSKLFKVIELKAGDIVENPSESFSYNVVEKDEIIAVLYLEETGLGIEAIRTDGVFFTIVMEVSKDVKPGISPIKFESFGATADNDMNEMTPKLVEGKVEIIEASAPEATPTPGSTAGSGAGGGTGSSGSGQPSATPTPTATEKPSTTPKTTEQPHEDIPQSGGTGEHAPFLKGYPGGLFKPENNITRAEAAVIFAKLLGADENSAGKNSSITFKDLKDSHWAAWAIKYVTEQNLFGGYPDGTFMPDKSITRAEFATVTYKFLEKLGKIEQGTDVKTQLKDIEGHWAQKYIETLVAKGYIKGYPDETFRPQASIKRAESVALINRSLERGPLNGAVLEFTDVPVNYWAYKDIAEGVIYHSYKIDENGQEVMVEKLD

Annotated regions:
phrase: PSTTPKTTEQPHEDIPQSGGTGEHAPFLKGYPGGLFKPENNITRAEAAVIFAKLLGADENSAGK
type: DOMAIN
name: SLH_dom
description: S-layer homology domain

phrase: LKGYPGGLFKPENNITRAEA
type: DOMAIN
name: SLH_dom
description: S-layer homology domain

phrase: TFKDLKDSHWAAWAIKYVTEQNLFGGYPDGTFMPDKSITRAEF
type: DOMAIN
name: SLH_dom
description: S-layer homology domain

phrase: KDIEGHWAQKYIETLVAKGYIKGYPDETFRPQASIKRA
type: DOMAIN
name: SLH_dom
description: S-layer homology domain

phrase: DVKTQLKDIEGHWAQKYIETLVAKGYIKGYPDETFRPQASIKRAESVALINRSLERGPLNGAV
type: DOMAIN
name: SLH_dom
description: S-layer homology domain

phrase: EIIIGNVKARPGDRIEVPVSLKNVPDKGIVSSDFVIEYDSKLFKVIELKAGDIVENPSESFSYNVVEKDEIIAVLYLEETGLGIEAIRTDGVFFTIVMEVSKDVKPGISPIKFESFGATADNDMNEMTPKLVEGKVE
type: DOMAIN
name: Cohesin_dom
description: Cellulosome anchoring protein, cohesin domain

phrase: SSITFKDLKDSHWAAWAIKYVTEQNLFGGYPDGTFMPDKSITRAEFATVTYKFLEKLGKIEQG
type: DOMAIN
name: SLH_dom
description: S-layer homology domain
Protein sequence:
MLSPRKTKFRKHHRGRMKGISTRGNSIVFGKFALQALEPSWITSRQIEAGRRSMTRYARRGGKIWIRIFPDKPVTMRPAETRMGSGKGSPEYWVAVVKPGRILYEMDGVPENIARAAMKIAAYKMPNKTQFLIRDNKDLIDSKI

Annotated regions:
phrase: RRGGKIWIRIF
type: CONSERVED_SITE
name: Ribosomal_uL16_CS
description: Large ribosomal subunit protein uL16, conserved site

phrase: RGNSIVFGKFALQALEPSWITSRQIEAGRRSMTRYARRGGKIWIRIFPDKPVTMRPAETRMGSGKGSPEYWVAVVKPGRILYEMDGVPENIARAAMKIAAYKMPNKTQ
type: DOMAIN
name: Ribosomal_uL16_dom
description: Large ribosomal subunit protein uL16 domain

phrase: RMGSGKGSPEY
type: CONSERVED_SITE
name: Ribosomal_uL16_CS
description: Large ribosomal subunit protein uL16, conserved site
Protein sequence:
MEFYPVAIEKLIEEFAKLPGVGYKTAQRLTMHVLNLPKEEVEGFADALKKARGTIKYCSVCGNYTDTDPCAICSNPNRDKSLVCVVEEPKDIISMEKVREFNGVYHVLHGVISPMLGKGPDSIKLRELVSRMNGKVKEVIVATNPNVDGEATAMYISKILKPLGVKVTRIAHGIPVGGDLEYADEVTLAKALEGRREI

Annotated regions:
phrase: SLVCVVEEPKDIISMEKVREFNGVYHVLHGVISPMLGKGPDSIKLRELVSRMNGKVKEVIVATNPNVDGEATAMYISKILKPLGVKVTRIAHGIPVGGDLEYADEVTLAK
type: DOMAIN
name: TOPRIM_RecR
description: RecR, TOPRIM domain

phrase: SLVCVVEEPKDIISMEKVREFNGVYHVLHGVISPMLGKGPDSIKLRELVSRMNGKVKEVIVATNPNVDGEATAMYISKILKPLGVKVTRIAHGI
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: IKYCSVCGNYTDTDPCAICS
type: DOMAIN
name: Rcmb_RecR_Znf
description: Recombination protein RecR, zinc finger domain

phrase: LVCVVEEPKDIISMEKVREFNGVYHVLHGVISPMLGKGPDSIKLRELVSRMNGKVKEVIVATNPNVDGEATAMYISKILKPLGVKVTRI
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: CSVCGNYTDTDPCAICSNPNR
type: DOMAIN
name: Rcmb_RecR_Znf
description: Recombination protein RecR, zinc finger domain

phrase: SLVCVVEEPKDIISMEKVREFNGVYHVLHGVISPMLGKGPDSIKLRELVSRMNGKVKEVIVATNPNVDGEATAMYISKILKPLG
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain