nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MADSSEGPRAGPGEVAELPGDESGTPGGEAFPLSSLANLFEGEDGSLSPSPADASRPAGPGDGRPNLRMKFQGAFRKGVPNPIDLLESTLYESSVVPGPKKAPMDSLFDYGTYRHHSSDNKRWRKKIIEKQPQSPKAPAPQPPPILKVFNRPILFDIVSRGSTADLDGLLPFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSNGRNDTIPVLLDIAERTGNMREFINSPFRDIYYRGQTALHIAIERRCKHYVELLVAQGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVNYLTENPHKKADMRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLLKCARLFPDSNLEAVLNNDGLSPLMMAAKTGKIGIFQHIIRREVTDEDTRHLSRKFKDWAYGPVYSSLYDLSSLDTCGEEASVLEILVYNSKIENRHEMLAVEPINELLRDKWRKFGAVSFYINVVSYLCAMVIFTLTAYYQPLEGTPPYPYRTTVDYLRLAGEVITLFTGVLFFFTNIKDLFMKKCPGVNSLFIDGSFQLLYFIYSVLVIVSAALYLAGIEAYLAVMVFALVLGWMNALYFTRGLKLTGTYSIMIQKILFKDLFRFLLVYLLFMIGYASALVSLLNPCANMKVCNEDQTNCTVPTYPSCRDSETFSTFLLDLFKLTIGMGDLEMLSSTKYPVVFIILLVTYIILTFVLLLNMLIALMGETVGQVSKESKHIWKLQWATTILDIERSFPVFLRKAFRSGEMVTVGKSSDGTPDRRWCFRVDEVNWSHWNQNLGIINEDPGKNETYQYYGFSHTVGRLRRDRWSSVVPRVVELNKNSNPDEVVVPLDSMGNPRCDGHQQGYPRKWRTDDAPL

Annotated regions:
phrase: VVSYLCAMVIFTLTAYYQPLEGTPPYPYRTTVDYLRLAGEVITLFTGVLFFFTNIKDLFMKKCPGVNSLFIDGSFQLLYFIYSVLVIVSAALYLAGIEAYLAVMVFALVLGWMNALYFTRGLKLTGTYSIMIQKILFKDLFRFLLVYLLFMIGYASALVSLLNPCANMKVCNEDQTNCTVPTYPSCRDSETFSTFLLDLFKLTIGMGDLEMLSSTKYPVVFIILLVTYIILTFVLLLNMLIALMGETVGQVSKE
type: DOMAIN
name: Ion_trans_dom
description: Ion transport domain

phrase: RGQTALHIAIERRCKHYVELLVAQGADVHAQA
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: FGELPLSLAACTNQPHIVNYLTENPHKKA
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: DGLSPLMMAAKTGKIGIFQHIIRREVTDE
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: RGQTALHIAIERRCKHYVELLVAQGADVH
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: GQTALHIAIERRCKHYVELLVAQGADVHA
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat
Protein sequence:
MSPKTETKAGVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPAEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVAGEESQFIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYTKTFLGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIFKSQAETGEIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRSRGIYFTQDWVSMPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRNLAREGNEIIREASKWSPELAAACEVWKEIKFEFEAMDTL

Annotated regions:
phrase: GIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIFKSQAETGEIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRSRGIYFTQDWVSMPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRNLAREGNEIIREASKWSPELAAACEV
type: DOMAIN
name: RuBisCO_lsu_C
description: Ribulose bisphosphate carboxylase, large subunit, C-terminal

phrase: YYTPDYETKDTDILAAFRVTPQPGVPAEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVAGEESQFIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPA
type: DOMAIN
name: RuBisCO_lsu_fd_N
description: Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal

phrase: GLDFTKDD
type: ACTIVE_SITE
name: RuBisCo_large_chain_AS
description: Ribulose bisphosphate carboxylase, large chain, active site
Protein sequence:
MSIEVANESGIDVSEAELVSVARFVIAKMDVNPCAELSMLLLDTAAMADLHMRWMDLPGPTDVMSFPMDELEPGGRPDAPEPGPSMLGDIVLCPEFAAEQAAAAGHSLGHELALLTIHGVLHLLGYDHAEPDEEKEMFALQDRLLEEWVADQVEAYQHDRQDEKDRRLLDKSRYFDL

Annotated regions:
phrase: HGVLHLLGYD
type: CONSERVED_SITE
name: YbeY_CS
description: Endoribonuclease YbeY, conserved site
Protein sequence:
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGADSAEGDDEGEEY

Annotated regions:
phrase: GGGTGS
type: CONSERVED_SITE
name: Tubulin_CS
description: Tubulin, conserved site

phrase: FNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFD
type: DOMAIN
name: Tubulin_FtsZ_GTPase
description: Tubulin/FtsZ, GTPase domain

phrase: ECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDI
type: DOMAIN
name: Tubulin_FtsZ_GTPase
description: Tubulin/FtsZ, GTPase domain

phrase: LNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD
type: DOMAIN
name: Tubulin/FtsZ_2-layer-sand-dom
description: Tubulin/FtsZ, 2-layer sandwich domain

phrase: PRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARL
type: DOMAIN
name: Tubulin/FtsZ_2-layer-sand-dom
description: Tubulin/FtsZ, 2-layer sandwich domain
Protein sequence:
MQCALYDAGRCRSCQWITQPIPEQLSAKTADLKNLLADFPVEEWCAPVSGPEQGFRNKAKMVVSGSVEKPLLGMLHRDGTPEDLCDCPLYPASFAPVFAALKPFIARAGLTPYNVARKRGELKYILLTESQSDGGMMLRFVLRSDTKLAQLRKALPWLQEQLPQLKVITVNIQPVHMAIMEGETEIYLTEQQALAERFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVNHMWDLFCGVGGFGLHCATPDIQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEVPELVLVNPPRRGIGIPLCDYLSTMAPRFIIYSSCNAQTMAKDIRELPGYRIERVQLFDMFPHTAHYEVLTLLVKQ

Annotated regions:
phrase: NPPRRGIGIPLCDYLSTMAPRFIIYSSCNAQ
type: ACTIVE_SITE
name: MeTrfase_TrmA_AS
description: RNA methyltransferase TrmA, active site

phrase: FDMFPHTAHY
type: CONSERVED_SITE
name: MeTrfase_TrmA_CS
description: RNA methyltransferase TrmA, conserved site
Protein sequence:
MEKIIVLATRNAGKIAELEKTLSEYGLSVRGLDAYPEIGEIVEDGDTFEENSLIKARTVAKLTGLVAVADDSGLEVDVLDKAPGVYSARYSDDTPNLKGETRDKRNNEKLLMELVGVPHEKRTARFRCVMSACSPSGKCITASGSWEGLIGAEEVGDNGFGYDPLFVDANDGAVSALLSREEKNKRSHRGNALAALLEQWDEFWSSCE

Annotated regions:
Protein sequence:
MSYQYPSGFPGYPGYPGGDPSYPPAAQQAFPGGQFPPAAGGGAFPPASGGGNAPPPGGGYPHAGGYPAPGGYPGGMPSYPGAPGFGAPAGGQGYGAPPGAPAYGVPGYGGPGFNAPAGGYGAPNAGGFGVPPAGGYGSPGGAPGYGGFSQPSSQSYGAGGPGQMPGQMPGQMPGQAPSGYPSGPAPAQPTPYAAAMTATQGTIKAAPNFDALSDAEKLRKAMKGFGTDEKPIDVVANRSNDQRQKIQAAFKTAYGKDLIKDLKSELSGNVEELIIALFMPSTYYDAWSLYNAMKGAGTQERVLIEILCTRTNSEIRNIVACYKQEFGREIEKDIRSDTSGHFERLLISIMARGIVDESQNVNMQQAEQDAQRLYQAGEGKLGTDESSFNLVLASRSFPQLKAVAEAYARISKRDLLSVIGREFSGYIEDGLKAVLQCAINRPLFFRDRLCRSMKGAGTDDSTLIRIIVTRSEIDLVQIKQAYVQMYQKSLSAAISSDTSGAYKRMLLAISGH

Annotated regions:
phrase: GTDDSTLIRIIVTRSEIDLVQIKQAYVQMYQKSLSAAISSDTSGAYKRMLLA
type: CONSERVED_SITE
name: Annexin_repeat_CS
description: Annexin repeat, conserved site

phrase: PSTYYDAWSLYNAMKGAGTQERVLIEILCTRTNSEIRNIVACYKQEFGREIEKDIRSDTSGHFERLLISIM
type: REPEAT
name: Annexin_repeat
description: Annexin repeat

phrase: FDALSDAEKLRKAMKGFGTDEKPIDVVANRSNDQRQKIQAAFKTAYGKDLIKDLKSELSGNVEELIIALF
type: REPEAT
name: Annexin_repeat
description: Annexin repeat

phrase: GTQERVLIEILCTRTNSEIRNIVACYKQEFGREIEKDIRSDTSGHFERLLIS
type: CONSERVED_SITE
name: Annexin_repeat_CS
description: Annexin repeat, conserved site

phrase: DAEKLRKAMKGFGTDEKPIDVVANRSNDQRQKIQAAFKTAYGKDLIKDLKSELSGNVEELIIA
type: REPEAT
name: Annexin_repeat
description: Annexin repeat

phrase: YDAWSLYNAMKGAGTQERVLIEILCTRTNSEIRNIVACYKQEFGREIEKDIRSDTSGHFERLLIS
type: REPEAT
name: Annexin_repeat
description: Annexin repeat

phrase: QDAQRLYQAGEGKLGTDESSFNLVLASRSFPQLKAVAEAYARISKRDLLSVIGREFSGYIEDGLK
type: REPEAT
name: Annexin_repeat
description: Annexin repeat

phrase: RLCRSMKGAGTDDSTLIRIIVTRSEIDLVQIKQAYVQMYQKSLSAAISSDTSGAYKRMLLA
type: REPEAT
name: Annexin_repeat
description: Annexin repeat

phrase: GTQERVLIEILCTRTNSEIRNIVACYKQEFGREIEKDIRSDTSGHFERLLIS
type: REPEAT
name: Annexin_repeat
description: Annexin repeat

phrase: GTDEKPIDVVANRSNDQRQKIQAAFKTAYGKDLIKDLKSELSGNVEELIIA
type: REPEAT
name: Annexin_repeat
description: Annexin repeat

phrase: GTDDSTLIRIIVTRSEIDLVQIKQAYVQMYQKSLSAAISSDTSGAYKRMLLA
type: REPEAT
name: Annexin_repeat
description: Annexin repeat

phrase: GTDESSFNLVLASRSFPQLKAVAEAYARISKRDLLSVIGREFSGYIEDGLKA
type: REPEAT
name: Annexin_repeat
description: Annexin repeat

phrase: QQAEQDAQRLYQAGEGKLGTDESSFNLVLASRSFPQLKAVAEAYARISKRDLLSVIGREFSGYIEDGLKAVL
type: REPEAT
name: Annexin_repeat
description: Annexin repeat

phrase: NRPLFFRDRLCRSMKGAGTDDSTLIRIIVTRSEIDLVQIKQAYVQMYQKSLSAAISSDTSGAYKRMLLAIS
type: REPEAT
name: Annexin_repeat
description: Annexin repeat
Protein sequence:
MLEDEKITDAQSGEADPAITPSSVASASAKKHKKKKKKKAGEGKDDQQRETKTTEGETAKQETSELTPDEQLSRELDWCIEQLELGLRTQKTSSKQREEASRALKTLRSSKAPLVKKRQVMRAISGDYRKKIEEEKNRQFKLIQSAMTSARVTTVSECKPVFHRRAERNTQPKNKTDGSQETQSSQETNEHTKTEDTKPFVFTKTHDEFCFDFDL

Annotated regions:
Protein sequence:
GFLTAEEKSLVNDLWSKVNVDEVGGEALGRLLVVYPWTQRFFQSFGDLSSADAIMGNSKVKAHGKKVLNSFSDGLKHIDDLKGTFAKLSELHCDKLHVDPENFKLLGNVLVCVLAHHFGNEFTPPVQAAYQKVVAGVANALAHKYH

Annotated regions:
phrase: LTAEEKSLVNDLWSKVNVDEVGGEALGRLLVVYPWTQRFFQSFGDLSSADAIMGNSKVKAHGKKVLNSFSDGLKHIDDLKGTFAKLSELHCDKLHVDPENFKLLGNVLVCVLAHHFGNEFTPPVQAAYQKVVAGVANALAHKY
type: DOMAIN
name: Globin
description: Globin

phrase: EALGRLLVVYPWTQRFFQSFGDLSSADAIMGNSKVKAHGKKVLNSFSDGLKHIDDLKGTFAKLSELHCDKLHVDPENFKLLGNVLVCVLAHHFGNEFTPPVQAAYQKVVAGVANA
type: DOMAIN
name: Globin
description: Globin
Protein sequence:
MPEGEMMHKLQDVIDRKLLDSRRIFFSEPVTEKSATEAIKKLWYLELTNPGQPIVFVINSPGGSVDAGFAVWDQIKMISSPLTTVVTGLAASMGSVLSLCAVPGRRFATPHARIMIHQPSIGGTITGQATDLDIHAREILKTKARIIDVYVEATGQSREVIEKAIDRDMWMSANEAMEFGLLDGILFSFNDL

Annotated regions:
phrase: RFATPHARIMIHQ
type: ACTIVE_SITE
name: ClpP_His_AS
description: ClpP, histidine active site
Protein sequence:
MTQPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMTVAEIVEREEWTGFRARETAALEAVTAPSTVIATGGGIILTEFNRHFMQNNGIVVYLCAPVSVLVNRLQAAPEEDLRPTLTGKPLSEEVQEVLEERDALYREVAHIIIDATNEPSQVISEIRSALAQTINC

Annotated regions:
phrase: RARETAALEAVTAPSTVIATGGGI
type: CONSERVED_SITE
name: Shikimate_kinase_CS
description: Shikimate kinase, conserved site
Protein sequence:
MLKTVHQKLLHHTRPLLAWLKLLWRRIDEDHMTTLAGNLAYVSLLSLVPLIAVVFALFAAFPMFSEVSVQIRHFIFANFIPATGDVIQGYIEQFVANSSRMTAVGAFGLIVTSLLLMYSIDSALNTIWRSTRSRPKVYSFAVYWMILTLGPLLAGASLAISSYLLSLRWASDLDGVIDNLLRLFPLILSWAAFWLLYSIVPTTQVRNRDAVIGALVAALLFEAGKKAFALYITTFPSYQLIYGVISVVPILFVWVYWTWCIVLLGAEITVTLGEYRKLKTEETEQP

Annotated regions:
Protein sequence:
MTASGGGSTAATGRMPTWKERENNKKRERRRRAIAAKIFTGLRSQGNYKLPKHCDNNEVLKALCLEAGWIVHEDGTTYRKGSRPTETTVPCSSIQLSPQSSAFQSPIPSYQASPSSSSYPSPTRFDPNQSSTYLIPYLQNLASSGNLAPLRISNSAPVTPPISSPRRSNPRLPRWQSSNFPVSAPSSPTRRLHHYTSIPECDESDVSTVDSCRWGNFQSVNVSQTCPPSPTFNLVGKSVSSVGVDVSVKPWEGEKIHDVGIDDLELTLGHNTKGRG

Annotated regions:
phrase: TGRMPTWKERENNKKRERRRRAIAAKIFTGLRSQGNYKLPKHCDNNEVLKALCLEAGWIVHEDGTTYRKGSRPTETTVPCSSIQLSPQSSAFQSPIPSYQASPSSSSYPSPTRFDPNQSSTYLIPYLQN
type: DOMAIN
name: BES1_N
description: BES1/BZR1 plant transcription factor, N-terminal
Protein sequence:
MTRIKLSYFTIGLVALLLALALWPNIPWRNGQEGQLDQIKARGELRVSTISSPLIYSTEKDTPSGFDYELAKRFADYLGVKLVIIPHHNIDDLFDALDNDDTDLLAAGLIYNRERLNRARTGPAYYSVSQQLVYRLGSPRPKSFSDLKGQVVVASGSAHMTTLKRLKQTKYPELNWSSSVDKSGKELLEQVAEGKLDYTLGDSATIALLQRIHPQLAVAFDVTDEEPVTWYFKQSDDDSLYAAMLDFYSEMVEDGSLARLEEKYLGHVGSFDYVDTKTFLSAIDNVLPSYQHLFEKHAGDIDWKLLAVIAYQESHWNPQATSPTGVRGLMMLTRVTADGLGVKDRVDPEESIRGGAIYLQRLMKKLPETIPEDERIWFALAAYNLGYGHMLDARRLTKNQNGNPDSWVDVKMRLPMLSQKRYYPSTTYGYARGHEAYNYVENIRRYQVSLVGYLQEKEKKAAQHAAIEAELGKSNPVVGPGWSIGD

Annotated regions:
phrase: IAYQESHWNPQATSPTGVRGLMMLTRVT
type: ACTIVE_SITE
name: Transglyc_AS
description: Prokaryotic transglycosylase, active site

phrase: SSPLIYSTEKDTPSGFDYELAKRFADYLGVKLVIIPHHNIDDLFDALDNDDTDLLAAGLIYNRERLNRARTGPAYYSVSQQLVYRLGSPRPKSFSDLKGQVVVASGSAHMTTLKRLKQTKYPELNWSSSVDKSGKELLEQVAEGKLDYTLGDSATIALLQRIHPQLAVAFDVTDEEPVTWYFKQSDDDSLYAAMLDFYSEMVEDGSLARLEEKYLG
type: DOMAIN
name: Solute-binding_3/MltF_N
description: Solute-binding protein family 3/N-terminal domain of MltF

phrase: ELRVSTISSPLIYSTEKDTPSGFDYELAKRFADYLGVKLVIIPHHNIDDLFDALDNDDTDLLAAGLIYNRERLNRARTGPAYYSVSQQLVYRLGSPRPKSFSDLKGQVVVASGSAHMTTLKRLKQTKYPELNWSSSVDKSGKELLEQVAEGKLDYTLGDSATIALLQRIHPQLAVAFDVTDEEPVTWYFKQSDDDSLYAAMLDFYSEMVEDGSLARLEEKYLGH
type: DOMAIN
name: Solute-binding_3/MltF_N
description: Solute-binding protein family 3/N-terminal domain of MltF

phrase: AGDIDWKLLAVIAYQESHWNPQATSPTGVRGLMMLTRVTADGLGVKDRVDPEESIRGGAIYLQRLMKKLPETIPEDERIWFALAAYNLGYGHMLDARRLTKNQNG
type: DOMAIN
name: Transglycosylase_SLT_dom_1
description: Transglycosylase SLT domain 1
Protein sequence:
MSSLREIILDTETTGLDPQQGHRIVEIGAIEMVNKVLTGKHFHFYINPERDMPFEAYKIHGISGEFLKDKPLFKTIANDFLKFIADSTLIIHNAPFDIKFLNHELSLLKRTEIKFLELTNTIDTLVMARNMFPGARYSLDALCKRFKVDNSGRQLHGALKDAALLAEVYVALTGGRQSTFKMINKPDEINNLAVKCVDVQQIKRGIVVKPTKEELQKHKEFIDKILIQA

Annotated regions:
phrase: IILDTETTGLDPQQGHRIVEIGAIEMVNKVLTGKHFHFYINPERDMPFEAYKIHGISGEFLKDKPLFKTIANDFLKFIADSTLIIHNAPFDIKFLNHELSLLKRTEIKFLELTNTIDTLVMARNMFPGARYSLDALCKRFKVDNSGRQLHGALKDAALLAEV
type: DOMAIN
name: Exonuclease_RNaseT/DNA_pol3
description: Exonuclease, RNase T/DNA polymerase III

phrase: REIILDTETTGLDPQQGHRIVEIGAIEMVNKVLTGKHFHFYINPERDMPFEAYKIHGISGEFLKDKPLFKTIANDFLKFIADSTLIIHNAPFDIKFLNHELSLLKRTEIKFLELTNTIDTLVMARNMFPGARYSLDALCKRFKVDNSGRQLHGALKDAALLAEVYVALTGGRQ
type: DOMAIN
name: Exonuclease_RNaseT/DNA_pol3
description: Exonuclease, RNase T/DNA polymerase III

phrase: EIILDTETTGLDPQQGHRIVEIGAIEMVNKVLTGKHFHFYINPERDMPFEAYKIHGISGEFLKDKPLFKTIANDFLKFIADSTLIIHNAPFDIKFLNHELSLLKRTEIKFLELTNTIDTLVMARNMFPGARYSLDALCKRFKVDNSGRQLHGALKDAALLAEVYVALTGGRQSTFKMINKPDEINNLAVKCVDVQQIKRGIVVKPTKEELQK
type: DOMAIN
name: DnaQ
description: DNA polymerase III epsilon subunit, exonuclease domain
Protein sequence:
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVEIDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGDVEIVKPQHVICHLTDENASISMRIKVRRGRGYVPASTRIHSEEDERPIGRLLVDACYSPVERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQPEVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPASIADE

Annotated regions:
phrase: EPLERGFGHTLGNALRRILLSSMPGCAVTEVEIDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGDVEIVKPQHVICHLTDENASISMRIKVRRGRGYVPASTRIHSEEDERPIGRLLVDACYSPVERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQ
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: HAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVEIDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGDVEIVKPQHVICHLTDENASISMRIKVRRGRGYVPASTRIHSEEDERPIGRLLVDACYSPVERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVD
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: EEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSLTEIKDVL
type: DOMAIN
name: RNAP_asu_C
description: RNA polymerase, alpha subunit, C-terminal

phrase: VEIDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGDVEIVKPQHVICHLTDENASISMRIKVRRGRGYVPASTRIHSEEDERPIGRLLVDACY
type: DOMAIN
name: DNA-dir_RNA_pol_insert
description: DNA-directed RNA polymerase, insert domain
Protein sequence:
MSQEILDQVRRRRTFAIISHPDAGKTTLTEKLLLFSGAIQSAGTVKGKKTGKFATSDWMDIEKQRGISVASSVMQFDYKDHTVNLLDTPGHQDFSEDTYRVLTAVDSALMVIDAAKGVEAQTIKLLNVCRLRDTPIVTFMNKYDREVRDSLELLDEVENILQIRCAPVTWPIGMGKNFKGVYHILNDEIYLFEAGGERLPHEFDIIKGIDNPELEQRFPLEIQQLRDEIELVQAASNEFNLDEFLAGELTPVFFGSAINNFGIQEILNSLIDWAPAPKPRDATVRMVEPDEAKFSGFIFKIQANMDPKHRDRIAFLRVCSGKFERGMKMKHLRINREIAASSVVTFMSHDRELVEEAYAGDIIGIPNHGNIQIGDSFSEGEQLAFTGIPFFAPELFRSVRIKNPLKIKQLQKGLQQLGEEGAVQVFKPMSGADLILGAVGVLQFEVVTSRLANEYGVEAVFDSASIWSARWVSCDDKKKLAEFEKANAGNLAIDAGGNLAYLAPNRVNLGLTQERWPDIVFHETREHSVKL

Annotated regions:
phrase: RRRTFAIISHPDAGKTTLTEKLLLFSGAIQSAGTVKGKKTGKFATSDWMDIEKQRGISVASSVMQFDYKDHTVNLLDTPGHQDFSEDTYRVLTAVDSALMVIDAAKGVEAQTIKLLNVCRLRDTPIVTFMNKYDREVRDSLELLDEVENILQIRCAPVTWPIGMGKNFKGVYHILNDEIYLFEAGGERLPHEFDIIKGIDNPELEQRFPLEIQQLRDEIELVQAASNEFNLDEFLAGELTPVFFGSAINNFGIQEILNSLIDWA
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: RRRRTFAIISHPDAGKTTLTEKLLLFSGAIQSAGTVKGKKTGKFATSDWMDIEKQRGISVASSVMQFDYKDHTVNLLDTPGHQDFSEDTYRVLTAVDSALMVIDAAKGVEAQTIKLLNVCRLRDTPIVTFMNKYDREVRDSLELLDEVENILQIRCAPVTWPIGMGKNFKGVYHILNDEIYLFEAGGERLPHEFDIIKGIDNPELEQRFPLEIQQLRDEIELVQAASNEFNLDEFLAGELTPVFFGSAINNFGIQEILNSLIDWAPAP
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: FTGIPFFAPELFRSVRIKNPLKIKQLQKGLQQLGEEGAVQVFKPMSGADLILGAVGVLQFEVVTSRLANEYGVEAVFDSASIWSARWVSCDDKKKLAEFEKANAGNLAIDAGGNLAYLAPNRVNLGL
type: DOMAIN
name: RF3_C
description: Peptide chain release factor 3, C-terminal

phrase: DWMDIEKQRGISVAS
type: CONSERVED_SITE
name: G_TR_CS
description: Tr-type G domain, conserved site

phrase: TFAIISHPDAGKT
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: QRGISVAS
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: NLLDTPGHQD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: RVLTAVDSALM
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: IVTFMNKYD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: AIISHPDAGKTTLTEKLLLFSGAIQSAGTVKGKKTGKFATSDWMDIEKQRGISVASSVMQFDYKDHTVNLLDTPGHQDFSEDTYRVLTAVDSALMVIDAAKGVEAQTIKLLNVCRLRDTPIVTFMNKYDREVRDSLELLD
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: KFSGFIFKIQANMDPKHRDRIAFLRVCSGKFERGMKMKHLRINREIAASSVVTFMSHDRELVEEAYAGDIIGIPNHGNIQIGDSFS
type: DOMAIN
name: EF-G-like_DII
description: Elongation factor G-like, domain II

phrase: RRRTFAIISHPDAGKTTLTEKLLLFSGAIQSAGTVKGKKTGKFATSDWMDIEKQRGISVASSVMQFDYKDHTVNLLDTPGHQDFSEDTYRVLTAVDSALMVIDAAKGVEAQTIKLLNVCRLRDTPIVTFMNKYDREVRDSLELLDEVENILQIRCAPVTWPIGMGKNFKGVYHILNDEIYLFEAGGERLPHEFDIIKGIDNPELEQRFPLEIQQLRDEIELVQAASNEFNLDEFLAGELTPVFFGSAINNFGIQEILNSLIDWAPA
type: DOMAIN
name: RF3_GTP-bd
description: Peptide chain release factor 3, GTP-binding domain
Protein sequence:
MTQMLEAMRGNITEAMKTVAADEKLDPEYIRKMVAKGYIAIPDNNQRETVAVGIGENLRTKVNATIGTSTDINDLDMELEKAKIAEEAGADTLMELSIGGDLDNIRRTVLKNTKKPVGSVPIYQTAVEAIEKDGSAINMDPDDMLKNIEKQAKDGIDFMAIHCSVNRETLKRLKRQGRNGGLVSRGGSFISSWMVHNDCENPLYENYDQVLDIVEEYDVCLSMANAMRAGALTDSTDRAQIQELIVLGELVDRARERGVQTIVEGPGHIPINEIETNINIQKKMCKNAPFYMLGPIVTDIAPAYDHIVSAIGAAQCARYGANFICYVTPAEHLALPGPEDVREGVIATRIGAHAGDLAIDLERFGEDDIAMAHARKSLNWTEQYEHAMWPADAKAIRDKRPPEADDTCTMCGNYCAIKIVNQWLDKADKDAFDN

Annotated regions:
Protein sequence:
MKIHQIHDFDLNDESDFIRTQQSLIHKINLSPVIHPDSVNTCAGVDLAYWEQDGEPYGVCSIIVIDADTKEVIEKVHSMGKISVPYVSGFLAFRELPLIIEAAEKLEAEPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIAKTYLKIKGCDFEMPENEVGAYTDILIDGEVYGRALRTRRDVKPIFLSCGHNIDLESSYQITMKMINRDSRLPIPVRLADLETHVLRTFYRKNHV

Annotated regions:
Protein sequence:
MATAGMNDVKNGMKILVNNEPAVISETEFIKPGKGQAFTRVRYRFIKSGRTVEMTMKATDDVEVADVVDTNMDYMYSDGEYWHFMDPETFEQVQADKAGMGGAEKWLKGEESCIVTLFNGSPIFVQPPNFVELKITETDPGVRGDTSGGGGKPATLETGAVVRVPLFVNQDEIIKVDTRSGEYSSRVK

Annotated regions:
phrase: KPATLETGAVVRVPLFVNQ
type: CONSERVED_SITE
name: Transl_elong_P/YeiP_CS
description: Translation elongation factor P/YeiP, conserved site

phrase: DTNMDYMYSDGEYWHFMDPETFEQVQADKAGMGGAEKWLKGEESCIVTLFNGSP
type: DOMAIN
name: Transl_elong_P/YeiP_cen
description: Translation elongation factor P/YeiP, central

phrase: VELKITETDPGVRGDTSGGGGKPATLETGAVVRVPLFVNQDEIIKVDTRSGEYSS
type: DOMAIN
name: Elong-fact-P_C
description: Elongation factor P, C-terminal

phrase: MNDVKNGMKILVNNEPAVISETEFIKPGKGQAFTRVRYRFIKSGRTVEMTMKATDD
type: DOMAIN
name: Transl_elong_KOW-like
description: Translation elongation factor, KOW-like

phrase: NMDYMYSDGEYWHFMDPETFEQVQADKAGMGGAEKWLKGEESCIVTLFNGSP
type: DOMAIN
name: Transl_elong_P/YeiP_cen
description: Translation elongation factor P/YeiP, central

phrase: VELKITETDPGVRGDTSGGGGKPATLETGAVVRVPLFVNQDEIIKVDTRSGEYSS
type: DOMAIN
name: Elong-fact-P_C
description: Elongation factor P, C-terminal

phrase: TNMDYMYSDGEYWHFMDPETFEQVQADKAGMGGAEKWLKGEESCIVTLFNGSPIFVQP
type: DOMAIN
name: Transl_elong_P/YeiP_cen
description: Translation elongation factor P/YeiP, central

phrase: VELKITETDPGVRGDTSGGGGKPATLETGAVVRVPLFVNQDEIIKVDTRSGEYSS
type: DOMAIN
name: Elong-fact-P_C
description: Elongation factor P, C-terminal
Protein sequence:
MSEQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRCYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRMQGEAIDIKAV

Annotated regions:
phrase: KDGKINLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQRVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRCYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRCYLEKSNANQGRVTIEYVMLDHVNDGTEH
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: INLLDLNRQQMREFFKDLGEKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLKEVAE
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: EDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRCYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGD
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MPAPGELTFVAPRGASKPPRHLADLDPAERREAVAALGEKPFRAQQLSRHYFARLSDDPAGWTDIPAAAREKLAGALLPPLMRVVRHISCDEGATRKTLWRLHDGTLVESVLMRYPDRVTMCVSSQAGCGMNCPFCATGQAGLDRNLSTAEIVHQIVDGARALRDGEVPGGEARLSNIVFMGMGEPLANYRRVVGAIRRLTDEAPDGVGLSQRGITVSTVGLVPAMLRFADEGFSCRLAVSLHAPDDELRDTLVPVNTRWKVREVLDAASTYAERSGRRISIEYALIRDINDQEWRADLLGRLLKGRGAHVNLIPLNPTPGSKWTASRPEDERAFVAALEARGVPVTVRDTRGQEIEGACGQLAAAER

Annotated regions:
phrase: VTMCVSSQAGCGMNCPFCATGQAGLDRNLSTAEIVHQIVDGARALRDGEVPGGEARLSNIVFMGMGEPLANYRRVVGAIRRLTDEAPDGVGLSQRGITVSTVGLVPAMLRFADEGFSCRLAVSLHAPDDELRDTLVPVNTRWKVREVLDAASTYAERSGRRISIEYALIRDINDQEWRADLLGRLLKGRGAHVNLIPLNPTPGSKWTASRPEDERAFVAA
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: YPDRVTMCVSSQAGCGMNCPFCATGQAGLDRNLSTAEIVHQIVDGARALRDGEVPGGEARLSNIVFMGMGEPLANYRRVVGAIRRLTDEAPDGVGLSQRGITVSTVGLVPAMLRFADEGFSCRLAVSLHAPDDELRDTLVPVNTRWKVREVLDAASTYAERSGRRISIEYALIRDINDQEWRADLLGRLLKGRGAHVNLIPLNPTPGSKWTASRPEDERAFVAALEARGVPVTVRDTRGQ
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: KPPRHLADLDPAERREAVAALGEKPFRAQQLSRHYFARLSDDPAGWTDIPAAAREKLAGALLPPLMRVVRHISCDEGATRKTLWRLHDGTLVESVLMRYPDRVTMCVSSQAGCGMNCPFCATGQAGLDRNLSTAEIVHQIVDGARALRDGEVPGGEARLSNIVFMGMGEPLANYRRVVGAIRRLTDEAPDGVGLSQRGITVSTVGLVPAMLRFADEGFSCRLAVSLHAPDDELRDTLVPVNTRWKVREVLDAASTYAERSGRRISIEYALIRDINDQEWRADLLGRLLKGRGAHVNLIPLNPTPGSKWTASRPEDERAFVAALEARGVPVTVRDTRGQEIEGACGQLAAA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SSQAGCGMNCPFCATGQAGLDRNLSTAEIVHQIVDGARALRDGEVPGGEARLSNIVFMGMGEPLANYRRVVGAIRRLTDEAPDGVGLSQRGITVSTVGLVPAMLRFADEGFSCRLAVSLHAPDDELRDTLVPVNTRWKVREVLDAASTYAERSGRRISIEYALIRDINDQEW
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LADLDPAERREAVAALGEKPFRAQQLSRHYFARLSDDPAGWTDIPAAAREKL
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MVKLASNENPYGPSPKAIEAFRSYSDLHIYPNPEYRELREKISDYTGWDADRVVVGAGIDGILETLFRILIDEGDEVVIPIPTFPYYHILTKLSCGKEVLVRRGENYRIDESIFDAITQKTKIILICNPNNPTGNAEDAKLIEELVNSTNALIFLDEAYVEFSDVSFSVDAENVVIARTFSKAFGLANLRIGYALLPEWLVSPFRAAMTPFPLSTPAAKAAEAALDDVEWMRSCVGRIKAERERLYKELKKLVEVNLSQANFLFFESPVENLAEELLKRGVIVRDCSSFVGCGNHIRVTVGRPEENDMFLEALKEVLGC

Annotated regions:
phrase: MVKLASNENPYGPSPKAIEAFRSYSDLHIYPNPEYRELREKISDYTGWDADRVVVGAGIDGILETLFRILIDEGDEVVIPIPTFPYYHILTKLSCGKEVLVRRGENYRIDESIFDAITQKTKIILICNPNNPTGNAEDAKLIEELVNSTNALIFLDEAYVEFSDVSFSVDAENVVIARTFSKAFGLANLRIGYALLPEWLVSPFRAAMTPFPLSTPAAKAAEAALDDVEWMRSCVGRIKAERERLYKELKKLVEVNLSQANFLFFESPVENLAEELLKRGVIVRDCSSFVGCGNHIRVTVGRPEENDMFLEA
type: DOMAIN
name: Aminotransferase_I/II_large
description: Aminotransferase, class I/classII, large domain