Protein sequence:
MGARASILRGGKLDAWERIKLKPGGKKHYMMKHLVWASRELERFALDPGLLETSEGCKQIMKQLQPALQTGTKELISLHNTVATLYCVHEKIDVRDTKEALDKIKEEQNKSQQKTQQAEAADKGKVSQNYPIVQNLQGQMVHQPISARTLNAWVKVVEEKAFSPEVIPMFTALSEGATPQDLNTMLNTVGGHQAAMQMLKDTINEEAAEWDRLHPVHAGPVAPGQMREPRGSDIAGTTSTLQEQITWMTNNPPVPVGDIYKRWIILGLNKIVRMYSPVSILDIKQGPKEPFRDYVDRFFKTLRAEQATQDVKNWMTDTLLVQNANPDCKTILRALGPGASLEEMMTACQGVGGPGHKARVLAEAMSKVNNTNIMMQRSNCKGPKRTIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQVKDCTERQANFFRENLAFPQGEARKSSSEQNRANSPTRRELQVWGRDNNSLSEAGDDRQGTALNFPQITLWQRPLVNIKVGGQLKEALLDTGADDTVLEEIKLPGNWKPKMIGGIGGFIKVRQYDQILIEICGKKAIGTVLVGPTPVNIIGRNMLTQLGCTLNFPISPIETVPVKLKPGMDGPKVKQWLLTEEKIKALTAICDEMEREGKITKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTWDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEGFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPSIFQSSTTKILEPFRAQNPEIIIYQYMDDLYVGSDLEIGQHRAKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGAKALTDIVPLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQNQWTYQIYQEPFKNLKTGKYAKMRTAHTNDVRQLTEAVQKIALESIIIWGKTPKFRLPIQKETWEAWWTDYWQATWIPEWEFVNTPPLVKLWYQLEKEPIAGAETFYVDGAANREIKMGKAGYVTDRGRQKIVSITETTNQKTELQAIQLALQDSGSEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKERVYLSWVPAHKGIGGNEQVDKLVSSGIRKVLFLDGINKAQEEHEKYHSNWRAMASEFNLPPIVAKEIVASCDKCQLKGEATHGQVDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVKVIHTDNGSNFISNTVKAACWWAGIQQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDIIATDIQTKELQKQIMKIQNFRVYYRDSRDPIWKGPAKLLWKGEGAVVLQDNSDIKVVPRRKVKIIKDYGKQMAGADCMASRQDED

Annotated regions:
phrase: EGKITKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTWDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEGFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPSIFQSSTTKILEPFRAQNPEIIIYQYMDDLYVGSDLEIGQHRAKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYE
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: RASILRGGKLDAWERI
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: KPGGKKHYMMKHLVWASR
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: ERFALDPGLLETSEG
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: TGTKELISLHNTVATLYCV
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: HEKIDVRDTKEAL
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: VQPIQLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGAKALTDIVPLTEEAELE
type: DOMAIN
name: RVT_thumb
description: Reverse transcriptase thumb

phrase: YYDPSKDLIAEIQKQGQNQWTYQIYQEPFKNLKTGKYAKMRTAHTNDVRQLTEAVQKIALESIIIWGKTPKFRLPIQKETWEAWWTDYWQATWIPEWEFVN
type: DOMAIN
name: RVT_connect
description: Reverse transcriptase connection

phrase: AQEEHEKYHSNWRAMASEFNLPPIVAKEIVASCDKC
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: SPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVKVIHTDNGSNFISNTVKAACWWAGIQQEFGIPYN
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: YSPVSILDIKQGPKEPFRDYVDRFFKTLRAEQATQDVKNWMTDTLLVQNANPDCKTILRALGPGASLEEMMT
type: DOMAIN
name: Gag_p24_C
description: Retroviral nucleocapsid Gag protein p24, C-terminal domain

phrase: IKVGGQLKEALLDTGADDTVLEEIKLPGNWKPKMIGGIGGFIKVRQYDQILIEICGKKAIGTVLVGPTPVNIIGRNML
type: DOMAIN
name: Retropepsin-like_cat_dom
description: Retropepsin-like catalytic domain

phrase: IKKKDSTKWRKLVDFRELNKRTWDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEGFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPSIFQSSTTKILEPFRAQNPEIIIYQYMDDLYVGSDLEIGQHRAKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYE
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: FRVYYRDSRDPIWKGPAKLLWKGEGAVVLQDNSDIKVVPRRKVKIIK
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: CWKCGKEGHQVKDCT
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: IKCFNCGKEGHLARNC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: GCWKCGKEGHQVKDCT
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: DGINKAQEEHEKYHSNWRAMASEFNLPPIVAKEIVASCDKC
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: VDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVKVIHTDNGSNFISNTVKAACWWAGIQQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDI
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: AETFYVDGAANREIKMGKAGYVTDRGRQKIVSITETTNQKTELQAIQLALQDSGSEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKERVYLSWVPAHKGIGGNEQVDKLVSSG
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: KEALLDTGADDTVLEEIKLPGNWKPKMIGGIGGFIKVRQYDQILIEICGKKAIGTVLVGPTPVNIIGRN
type: DOMAIN
name: Peptidase_A2_cat
description: Peptidase A2A, retrovirus, catalytic

phrase: KCFNCGKEGHLARNC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: WQRPLVNIKVGGQLKEALLDTGADDTVLEEIKLPGNWKPKMIGGIGGFIKVRQYDQILIEICGKKAIGTVLVGPTPVNIIGRNMLTQLGCT
type: DOMAIN
name: Retropepsins
description: Retropepsins

phrase: ALLDTGADDTV
type: ACTIVE_SITE
name: Aspartic_peptidase_AS
description: Aspartic peptidase, active site

phrase: VYYRDSRDPIWKGPAKLLWKGEGAVVLQDNSDIKVVPRRKVKI
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: KCFNCGKEGHLARNCR
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: GCWKCGKEGHQVKDCT
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: IAGAETFYVDGAANREIKMGKAGYVTDRGRQKIVSITETTNQKTELQAIQLALQDSGSEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKERVYLSWVPAHKGIGGNEQVDKLVSSGI
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: GARASILRGGKLDAWERIKLKPGGKKHYMMKHLVWASRELERFALDPGLLETSEGCKQIMKQLQPALQTGTKELISLHNTVATLYCVHEKIDVRDTKEALDKIKEEQNKSQQKTQQAEAADKGKVS
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal