nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MPRKRVIARREVLPDPKYGSVQLAKFITILMLSGKKSLAERIIYGALGRVSEKANQDPMDVLEKALENVRPLVEVKSRRVGGATYQVPVEVRPERRSTLAMRWLVEAARKRSEKSMDLRLAGELLDAHEGKGTAVKKREDTHRMAEANKAFAHYRW

Annotated regions:
phrase: PRKRVIARREVLPDPKYGSVQLAKFITILMLSGKKSLAERIIYGALGRVSEKANQDPMDVLEKALENVRPLVEVKSRRVGGATYQVPVEVRPERRSTLAMRWLVEAARKRSEKSMDLRLAGELLDAHEGKGTAVKKREDTHRMAEAN
type: DOMAIN
name: Ribosomal_uS7_dom
description: Small ribosomal subunit protein uS7 domain
Protein sequence:
MRSDLPKVLHPLAGRPLLSHVISTARLLSPSKLCVVVGHGADRVTQNLADTNLVWAEQAQQLGTGHAVTQALPKLESGGTVLVLYGDVPLIGSGTLRALVDAASQGHLALLTQELDQPKGYGRIVRNGGGRVARIVEEKDATEAERAIREVNTGILAAPGDKLAAWLAGLGNDNAQGEYYLTDIVAAAAAEGVPIQVCHPANVHEVLGVNSKAELAALERHYQMNQAAKLLDSGVTLADPARIDVRGELTCGRDVSIDVNCIFEGRVILGDGVKIGANCILRDVTLGAGTEVRPFSLLEEATVGANARIGPYARIRPGTALEDDVHIGNFVEVKASRVGRGSKANHLAYVGDATVGSGVNIGAGTITCNYDGVNKHRTVIEDDVHIGSDVQLVAPVTVGKGATIGAGATITKDVPPGGLTLTEAKQQTRPAWKRPTKRP

Annotated regions:
phrase: GVTLADPARIDVRGELTCGRDVSIDVNCIFEGRVILGDGVKIGANCILRDVTLGAGTEVRPFSLLEEATVGANARIGPYARIRPGTALEDDVHIGNFVEVKASRVGRGSKANHLAYVGDATVGSGVNIGAGTITCNYDGVNKHRTVIEDDVHIGSDVQLVAPVTVGKGATIGAGATITKDVPPGGLTLTEAK
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain

phrase: TVIEDDVHIGSDVQLVAPVTVGKGATIGAGATIT
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: ATVGANARIGPYARIRPGTALEDDVHIGNFVEV
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: PKVLHPLAGRPLLSHVISTARLLSPSKLCVVVGHGADRVTQNLADTNLVWAEQAQQLGTGHAVTQALPKLESGGTVLVLYGDVPLIGSGTLRALVDAASQGHLALLT
type: DOMAIN
name: MobA-like_NTP_Trfase
description: MobA-like NTP transferase

phrase: IGSDVQLVAPVTVGKGATIGAGATITKD
type: CONSERVED_SITE
name: Hexapep_transf_CS
description: Hexapeptide transferase, conserved site
Protein sequence:
MRRFYRGIFIVWVALRYGLDELVLTSFQKPWLRVVARIVSIGRNLDAPRGQRLREALERLGPIFVKFGQVLSTRRDLLPPDIADELAFLQDRVPPFPSAVAIATIERAFRRPVGDVFVQFDETPIASASIAQVHFATIRTDEGEVREVAVKVLRPSMRGVIEKDLALMAMMAGWVEKLSPDGKRLKPREVVGEFDKYLHDELDLVREAANAAQLRRNMASLELVLIPEMFWDFCHPEVIVMERMNGVPIAQLDRLRAAGVDIPKLARDGVTIFFTQVFRDGFFHADMHPGNIQVSLAPETFGRYISLDFGIIGTLTESDKEYLAQNFVAFFRRDYKRVAELHLESGWVPEGTRIDELEGAIRTVCEPYFDRPLKEISLGMVLMRLFQTSRRFHVEIQPQLVLLQKTLLNIEGLGRQLDPELDLWHTAKPFLEKWMVDQIGPKKLFQQLKAEAPRYAKLLPELPRLLHDFLENRPADHRRELLELLAAQKRTNRLLQTIIYGGIGFVLGLLAMQLLVRVRLF

Annotated regions:
phrase: LQDRVPPFPSAVAIATIERAFRRPVGDVFVQFDETPIASASIAQVHFATIRTDEGEVREVAVKVLRPSMRGVIEKDLALMAMMAGWVEKLSPDGKRLKPREVVGEFDKYLHDELDLVREAANAAQLRRNMASLELVLIPEMFWDFCHPEVIVMERMNGVPIAQLDRLRAAGVDIPKLARDGVTIFFTQVFRDGFFHADMHPGNIQVSLAPETFGRYISLDFGIIGTLTESDKEYLAQNFVAFFRRDYKRVAEL
type: DOMAIN
name: UbiB_bact
description: UbiB domain, bacteria

phrase: LQDRVPPFPSAVAIATIERAFRRPVGDVFVQFDETPIASASIAQVHFATIRTDEGEVREVAVKVLRPSMRGVIEKDLALMAMMAGWVEKLSPDGKRLKPREVVGEFDKYLHDELDLVREAANAAQLRRNMASLELVLIPEMFWDFCHPEVIVMERMNGVPIAQLDRLRAAGVDIPKLARDGVTIFFTQVFRDGFFHADMHPGNIQVSLAPETFGRYISLDFGIIGTLTESDKEYLAQNFVAFFRRDYKRVAEL
type: DOMAIN
name: ABC1_dom
description: ABC1 atypical kinase-like domain
Protein sequence:
MSRQPILDIKGLRTVFRTRAREIVTVNDVDIVVNPGETVALVGESGSGKSVTSLSIMRLLARKVGFIDAGSIILRGKSGQTVDLAAIDEEAMRRIRGNDIGMVFQEPMTSLNPVYTIGDQIGEPLRVHRGTSRREALEAAVELLDRVGIPDARRRAGQYPHELSGGMRQRATIAMALICNPTLLIADEPTTALDVTIQAQILDLMQKLQSESGMGMLFVTHNLGVVAEIAQRVVVMYAGRIVESGPVKEVFRNPRHPYTMGLLRSMPRLGDATEMKRRGEKLNTIPGMVPGLANLPSGCAFAPRCSFAVEACHAAVPPLASVNEHHGSRCIRWQEIAA

Annotated regions:
phrase: PGETVALVGESGSGKSVTSLSIMRLLARKVGFIDAGSIILRGKSGQTVDLAAIDEEAMRRIRGNDIGMVFQEPMTSLNPVYTIGDQIGEPLRVHRGTSRREALEAAVELLDRVGIPDARRRAGQYPHELSGGMRQRATIAMALICNPTLLIADEPTTALDVTIQAQILDLMQKLQSESGMGMLFVTHNLGVVAEIAQRVVVMYAG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LSGGMRQRATIAMA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: VESGPVKEVFRNPRHPYTMGLLRSMPRLGDATEMKRRGEKLNTIPGMVPGLANLPSGCAFAPRCSFAVEA
type: DOMAIN
name: Oligopep_ABC_C
description: Oligopeptide/dipeptide ABC transporter, C-terminal

phrase: RIVESGPVKEVFRNPRHPYTMGLLRSMPRLGDATEMKRRGEKLNTIPGMVPGLANLPSGCAFAPRCSFAVEACHAAVPPLASVNEHHGSRC
type: DOMAIN
name: Oligopep_ABC_C
description: Oligopeptide/dipeptide ABC transporter, C-terminal

phrase: NDVDIVVNPGETVALVGESGSGKSVTSLSIMRLLARKVGFIDAGSIILRGKSGQTVDLAAIDEEAMRRIRGNDIGMVFQEPMTSLNPVYTIGDQIGEPLRVHRGTSRREALEAAVELLDRVGIPDARRRAGQYPHELSGGMRQRATIAMALICNPTLLIADEPT
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: KGLRTVFRTRAREIVTVNDVDIVVNPGETVALVGESGSGKSVTSLSIMRLLARKVGFIDAGSIILRGKSGQTVDLAAIDEEAMRRIRGNDIGMVFQEPMTSLNPVYTIGDQIGEPLRVHRGTSRREALEAAVELLDRVGIPDARRRAGQYPHELSGGMRQRATIAMALICNPTLLIADEPTTALDVTIQAQILDLMQKLQSESGMGMLFVTHNLGVVAEIAQRVVVMYAGRIVESGPVKEVFRNPRHPYTMGL
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain
Protein sequence:
MTNLEKMREKLQDQINYHNVLYHQKNKPEISDAEYDELKKKLAEIEPEIYATQDSVGAPPDERFSKVEHQEPMLSLENAYDEQGVEKFLSKIKRFLIEDKIEILCEPKIDGLSFSAIYEDGRFVKAATRGDGFVGEDVTHNVATIKGFPKFLQGVQGRLEVRGEIYISNSDFLKLNENDEFANPRNAAAGSLKQLDANITASRPLRYFAYSLIGGAEKSQSEVLNKLEALGFCVNEHQSLTSSLDGMLKFYNEVYNCRYNLDYDIDGIVYKVNDLVLQNRLGNTHKAPRSALAYKFSAVYAKTKLNKIFIQVGRTGVLTPVADLVPVNVGGVLVSRASLHNQDEIKRKDIREGDIVTIKRAGDVIPQIVEVSRDSRLPNTPEFVFPEVCPECGSKVRQVEGEAAVRCPEEFACKAQMIEKLKHFVSKDAFDIVGLGDKQIEFFYDLGLIKQIHDIFTLEERLDEFNLEEQSGWGEKSIANLLNSIQSRRVITLDRFIFSLGIRFIGQVAAELLADYYVSYNNWYNSMIELSLDNTELVGIDGIGKKGAESLESFFSKEHNIKMLNDLTACLQILPVSSNSSNSVLNNKIIVFTGKLLAMSRGEAKVRAKTLGAKVSSHLSAKTDYLIAGEKPGSKYKKAVELGVEILDEDQWHKVISLGVFK

Annotated regions:
phrase: SSNSVLNNKIIVFTGKLLAMSRGEAKVRAKTLGAKVSSHLSAKTDYLIAGEKPGSKYKKAVELGVEILDEDQ
type: DOMAIN
name: BRCT_dom
description: BRCT domain

phrase: NSVLNNKIIVFTGKLLAMSRGEAKVRAKTLGAKVSSHLSAKTDYLIAGEKPGSKYKKAVELGVEILDEDQWHKVISL
type: DOMAIN
name: BRCT_dom
description: BRCT domain

phrase: KIDGLSFSAIYEDGRFVKAATRGDGFVGE
type: ACTIVE_SITE
name: DNA_ligase_AS
description: NAD-dependent DNA ligase, active site

phrase: EKLQDQINYHNVLYHQKNKPEISDAEYDELKKKLAEIEPEIYATQDSVGAPPDERFSKVEHQEPMLSLENAYDEQGVEKFLSKIKRFLIEDKIEILCEPKIDGLSFSAIYEDGRFVKAATRGDGFVGEDVTHNVATIKGFPKFLQGVQGRLEVRGEIYISNSDFLKLNENDEFANPRNAAAGSLKQLDANITASRPLRYFAYSLIGGAEKSQSEVLNKLEALGFCVNEHQSLTSSLDGMLKFYNEVYNCRYNLDYDIDGIVYKVNDLVLQNRLGNTHKAPRSALAYKFS
type: DOMAIN
name: DNAligase_adenylation
description: NAD-dependent DNA ligase, adenylation

phrase: KTKLNKIFIQVGRTGVLTPVADLVPVNVGGVLVSRASLHNQDEIKRKDIREGDIVTIKRAGDVIPQIVEVSRDS
type: DOMAIN
name: NAD_DNA_ligase_OB
description: NAD-dependent DNA ligase, OB-fold

phrase: VGRTGVLTPVADLVP
type: CONSERVED_SITE
name: DNA_ligase_CS
description: NAD-dependent DNA ligase, conserved site

phrase: SVLNNKIIVFTGKLLAMSRGEAKVRAKTLGAKVSSHLSAKTDYLIAGEKPGSKYKKAVELGVEILDEDQW
type: DOMAIN
name: BRCT_dom
description: BRCT domain

phrase: CPECGSKVRQVEGEAAVRCPEEFACK
type: DOMAIN
name: Znf_DNAligase_C4
description: Zinc-finger, NAD-dependent DNA ligase C4-type

phrase: NLEKMREKLQDQINYHNVLYHQKNKPEISDAEYDELKKKLAEIEPEIYATQDSVGAPPDERFSKVEHQEPMLSLENAYDEQGVEKFLSKIKRFLIEDKIEILCEPKIDGLSFSAIYEDGRFVKAATRGDGFVGEDVTHNVATIKGFPKFLQGVQGRLEVRGEIYISNSDFLKLNENDEFANPRNAAAGSLKQLDANITASRPLRYFAYSLIGGAEKSQSEVLNKLEALGFCVNEHQSLTSSLDGMLKFYNEVYNCRYNLDYDIDGIVYKVNDLVLQNRLGNTHKAPRSALAYKFSAVYAKTKLNKIFIQVGRTGVLTPVADLVPVNVGGVLVSRASLHNQDEIKRKDIREGDIVTIKRAGDVIPQIVEVSRDSRLPNTPEFVFPEVCPECGSKVRQVEGEAAVRCPEEFACKAQMIEKLKHFVSKD
type: DOMAIN
name: DNAligase_N
description: NAD-dependent DNA ligase, N-terminal

phrase: RFSKVEHQEPMLSLENAYDEQGVEKFLSKIKRFLIEDKIEILCEPKIDGLSFSAIYEDGRFVKAATRGDGFVGEDVTHNVATIKGFPKFLQGVQGRLEVRGEIYISNSDFLKLNENDEFANPRNAAAGSLKQLDANITASRPLRYFAYSLIGGAEKSQSEVLNKLEALGFCVNEHQSLTSSLDGMLKFYNEVYNCRYNLDYDIDGIVYKVNDLVLQNRLGNTHKAPRSALAYKFS
type: DOMAIN
name: DNAligase_adenylation
description: NAD-dependent DNA ligase, adenylation

phrase: RFIFSLGIRFIGQVAAELLADYYVSYNNWYNSMIELSLDNTELVGIDGIGKKGAESLESFFSKEHNIK
type: DOMAIN
name: DisA/LigA_HHH
description: DisA/LigA, helix-hairpin-helix motif
Protein sequence:
MLRNDTITAIATPPGEGSIAIVRVSGPDAISISDRIFSGNIAGYASHTAHLGTVSHNAVYIDQALVLVMRAPRSFTGEDIVEFQCHGGYFACSQIVNTLLAEGARAALPGEFSQRAFLNGKIDLIQAEAIQQLIAADNIDAFRIAQNQFQGHTSQAISSISSLIIEALAYIEVLADFPEEDIETEDSLPKHRIMEALSITDELLSSFDEGQRLAQGTSIVLAGLPNAGKSSILNALTQKNRAIVTDIPGTTRDILEENWVLQGKNLRLIDSAGLRETENLVEKEGIARAREAMSQAEGILWVVDASQPLPEFPTILYQKPTILLWNKCDIVSPPQIEVPFQQISVSAKTGEGLLELKQALQKWLNTTQLGKSSKIFLVSARHHSLLHSVYTCLTAALNGFTEHLPNECIALDLRQALHSIGNLSGSEVTENVLGEIFSKFCIGK

Annotated regions:
phrase: QGTSIVLAGLPNAGKSSILNALTQKNRAIVTDIPGTTRDILEENWVLQGKNLRLIDSAGLRETENLVEKEGIARAREAMSQAEGILWVVDASQPLPEFPTILYQKPTILLWNKCDIVSPPQIEVPFQQISVSAKTGEGLLELKQALQKW
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain

phrase: TSIVLAGLPNAGKSSILNALTQKNRAIVTDIPGTTRDILEENWVLQGKNLRLIDSAGLRETENLVEKEGIARAREAMSQAEGILWVVDASQPLPEFPTILYQKPTILLWNKCDIVSPPQIEVPFQQISVSAKTGEGLLEL
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: DTITAIATPPGEGSIAIVRVSGPDAISISDRIFSGNIAGYASHTAHLGTVSHNAVYIDQALVLVMRAPRSFTGEDIVEFQCHGGYFACSQIVNTLLAEGARAALPGEFSQRAFLN
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal

phrase: IVLAGLPNAGKSSILNALTQKNRAIVTDIPGTTRDILEENWVLQGKNLRLIDSAGLRETENLVEKEGIARAREAMSQAEGILWVVDASQPLPEFPTILYQKPTILLWN
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: TITAIATPPGEGSIAIVRVSGPDAISISDRIFSGNIAGYASHTAHLGTVSHNAVYIDQALVLVMRAPRSFTGEDIVEFQCHGGYFACSQIVNTLLAEGARAALPGEFSQRAFLNG
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal

phrase: LIQAEAIQQLIAADNIDAFRIAQNQFQGHTSQAISSISSLIIEALAYIEVLADFPEEDIETEDSLPKHRIMEALSITDELLSSFDEGQRLAQGTSIVLAGLPNAGKSSILNALTQKNRAIVTDIPGTTRDILEENWVLQGKNLRLIDSAGLRETENLVEKEGIARAREAMSQAEGILWVVDASQPLPEFPTILYQKPTILLWNKCDIVSPPQIEVPFQQISVSAKTGEGLLELKQALQKWLNTTQLGKSSKIFLVSARHHSLLHSVYTCLTAALNGFTEHLPNECIALDLRQALHSIGNLSGSEVTENVLGEIFSKF
type: DOMAIN
name: MnmE_helical
description: MnmE, helical domain

phrase: GTSIVLAGLPNAGKSSILNALTQKNRAIVTDIPGTTRDILEENWVLQGKNLRLIDSAGLRETENLVEKEGIARAREAMSQAEGILWVVDASQPLPEFPTILYQKPTILLWNKCDIVSPPQIEVPFQQISVSAKTGEGLLELKQALQKWL
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain
Protein sequence:
MDVKKIQAAIQWMKQGGLVIVADDEDRESEGDIIGLGSKVTPQKINFITQTARGLLCTSIGRSIAERLNLTPMAQNNTDPYGTAFTVSVDYKTTTTGISAFDRATTIKALADSTTKADDFFKPGHTFPLVAKDGGVLERNGHTEASITLARLAGEAEVAYICEVMDADGHMARRPRLKEIAAEYNLPFLTIAELQEYVKNPTSKNNQFVDLPTVYGNFKIKAYVGENLALVKGPIDPNKPVLVRLHSECMTGDVFGSKRCDCGEQLHKAMQKIDHEGGILIYLRQEGRGIGLSNKLKAYALQDQGRDTYEANKILGFEPDERKYNIAKEILTDLGISKIRLLTNNPDKVTQLTKYGIEVTERVPLEIPANEINKFYLQTKRDKFHHLIMGK

Annotated regions:
phrase: VDLPTVYGNFKIKAYVGENLALVKGPIDPNKPVLVRLHSECMTGDVFGSKRCDCGEQLHKAMQKIDHEGGILIYLRQEGRGIGLSNKLKAYALQDQGRDTYEANKILGFEPDERKYNIAKEILTDLGISKIRLLTNNPDKVTQLTKYGIEVTERV
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MADGDSGSERGGSSGGPSGFSQHMSREQETQELASKRLDIQNKRFYLDVKQNAKGRFIKIAEVGAGGSKSRLTLSMAVAAEFRDYLGDFIEHYAQLGPSSPEQIAQASGEDGAGGPGGPRRALKSEFLVRENRKYYLDLKENQRGRFLRIRQTINRGPGFSGGTGGGPGLQSGQTIALPAQGLIEFRDALAKLIDDYGGEDDEGMGLGSGASGGGAGGGGMYGELPEGTSITVDSKRFFFDVGSNKYGVFLRVSEVKPSYRNSITVPLKAWGKFGGAFCRYSEEMKEIQERQRDKMYDRRGPGERGGSLGPGAGGGGDDSETEDVDDD

Annotated regions:
Protein sequence:
MGESARGGGSAETTGGLAAAVKTYLEYTPTGESIPAAAWRRRHRNVRVFVLAHIPLLLALGLYEGTESAVTGATIPPTPGILIAAELGIVGALVGLASIPSVSRRGRTALASTAVLASSVVLVQFSGGFIEAHFHFFVGMAVIAVYEDWLPFALGLVYVVFTHGVFGMINAERVYNHTAAINNPWVWGGIHGAFVLLLAGALMANWYSTERSREASQKRLEEARQKAQQVEDLEARQAEIEAEKAEAKRLKADAEEAREAAEAQQREVAALNERLEATANTYGAAMARAADGDLSVRLDPDVENDAMAAIAASFNEMLDETETTIREIQAVASDVAAASEDADAGVVEIEDASGQVSETVQEIAAGADEQREKLETVSGEMTDLSAAIEEVAASADSVAERSHETAAVAGDGEQTAEQAIADSRTVQSAVESTVQNVEALDDQLAEISEIVDLISDVAEQTNMLALNANIEAARADKSGDGFAVVADEVKDLAEETRASAGDIEALVADIDAQMQATVTEARTADESVQDAISAVDAVVDAFGTVAENAEETDTGVQEISTTTDDQAASTEEAVSMIAEVSDISTATAADAQQASTAAEQQTTAAATISENTAALREQADRLQGLVSTFDVHDESASTAARSE

Annotated regions:
phrase: QVSETVQEIAAGADEQREKLETVSGEMTDLSAAIEEVAASADSVAERSHETAAVAGDGEQTAEQAIADSRTVQSAVESTVQNVEALDDQLAEISEIVDLISDVAEQTNMLALNANIEAARADKSGDGFAVVADEVKDLAEETRASAGDIEALVADIDAQMQATVTEARTADESVQDAISAVDAVVDAFGTVAENAEETDTGVQEISTTTDDQAASTEEAVSMIAEVSDISTATAADAQQASTAAEQQTTAAATISENTAALREQADRLQGLVSTF
type: DOMAIN
name: MCPsignal_dom
description: Methyl-accepting chemotaxis protein (MCP) signalling domain

phrase: TAEQAIADSRTVQSAVESTVQNVEALDDQLAEISEIVDLISDVAEQTNMLALNANIEAARADKSGDGFAVVADEVKDLAEETRASAGDIEALVADIDAQMQATVTEARTADESVQDAISAVDAVVDAFGTVAENAEETDTGVQEISTTTDDQAASTEEAVSMIAEVSD
type: DOMAIN
name: MCPsignal_dom
description: Methyl-accepting chemotaxis protein (MCP) signalling domain

phrase: ERLEATANTYGAAMARAADGDLSVRLDPDVENDAMAAIAASFNEMLDETETTI
type: DOMAIN
name: HAMP_dom
description: HAMP domain

phrase: GVVEIEDASGQVSETVQEIAAGADEQREKLETVSGEMTDLSAAIEEVAASADSVAERSHETAAVAGDGEQTAEQAIADSRTVQSAVESTVQNVEALDDQLAEISEIVDLISDVAEQTNMLALNANIEAARADKSGDGFAVVADEVKDLAEETRASAGDIEALVADIDAQMQATVTEARTADESVQDAISAVDAVVDAFGTVAENAEETDTGVQEISTTTDDQAASTEEAVSMIAEV
type: DOMAIN
name: MCPsignal_dom
description: Methyl-accepting chemotaxis protein (MCP) signalling domain

phrase: ERLEATANTYGAAMARAADGDLSVRLDPDVENDAMAAIAASFNEMLDETETTI
type: DOMAIN
name: HAMP_dom
description: HAMP domain

phrase: VEIEDASGQVSETVQEIAAGADEQREKLETVSGEMTDLSAAIEEVAASADSVA
type: DOMAIN
name: HAMP_dom
description: HAMP domain
Protein sequence:
MSAAADVIVLSSSPDRIPNGSPVLPAHDPAKLFDLSPPSASSSPVRSPSELFQISTRSRFFELETPSRNKENKTPKEPPVRKVNTTSKAKSASSQDKPKRRGRKPASESQTVLGDSGLAGLAQQSAPKKTAGARKKRVDSEGKRGKATNRTIMGRVAKSGNVQAKPPQEKIMDVSTPNALPPTKPASGVVSLEIDGLQLETAMKRRIDWTPTKDTTARTVESSQQEVAEANPQSFGSLLSEYGFNDISSAQSDVRNLGDDGPTKRRRIELVDSRLFGSSKPASHDIDDKNLTEDSQQKQPEPKQKPKKQTKKFTTLTARVTASYLNNSHEGSDSSSKETTTSRENAATSRTRGSKRKGKATSKPKEPEFIVLSPEAAAKSLENQELIFGTCSQLEREDSPTSLKELQAAISESERYAVAEPSPLSSTLCATPTSRFTTARGLWSVAARDLEGSLIRQTEVVDLVDTPEPAKMTTSTNDSRNEKALEDAATVPPKEPFDLPKSEPPKLKAIPAAKKEPSPAPGMPTIKASDNLKGTTSQHSKPQPKMPNYNGFTDAELSRQVASYGFKPVKNRKAMIDLLQKCWVSKHGKGTTFETQAGSQNTSTEPTPVLTSSEPNTSQKQPRKTATSRKTAAKSKTNPDSNPPPKINSRKTPSSSDATKAPSIQSKPTQPPPIQSLSNVEEIEDSEEETLPSPFRIQNRYTPQPPETRQALPVSKTLYSPSRPKPRTTKSTTNNSATLNQKQPDLADQIFKAMHAQPAGTPSRPSWHEKILMYDPIILEDFATWLNTEGLGLVGEDREVSAAFLRKWCESRGICCCYR

Annotated regions:
Protein sequence:
MDDLTLLDLLECPVCFEKLDVTAKVLPCQHTFCKPCLQRIFKAHKELRCPECRTLVFCSIEALPANLLLVRLLDGVRSGHNSWRGGSFRRPRILTLQDNRKAKSSPRSLQASPFRLGPTVRIHMDGVPRAKALCNYRGKNPGDLKFNKGDVILLQRQLDENWYQGEINGVSGFFPASSVEVIKQLPQPPPLCRALYNFDLRDKDKSENQDCLTFLKDDVITVISRVDENWAEGKLGDKVGIFPILFVEPNLSARHLLEKSKGHQLSRTKHLSLMSSPSRGKATNTSTLRKSPGSRRKGSGQFAMTTALNTLNRMVHSPEGHQMVEISTPVLISSTSPSMLTQHGDRADFPASSAGQVSTSHPAPASPGHSTAMVSVPSSQQHLSTNMFVALHTYSAQGPEELDLKKGEGIRVLGKNQDGWLRGVSLVTGRTGIFPSDYVIPVFSSTARKTSSFPDSRHPTVCTTWALSTSSVSSQGSFSEGDPRQSGPFRSVFVPTAVNPPRSTSGPGTSGQGSLRKVRSSMRKNGSLQRPVQSGIPTFMVGSLRCSPAMVIRPQKFQFYQPQGMTPSPTPIMVEIGSKSISTGEPALTCINRGGKTRTHSAGNSIIMEGKETPIKSEPPPKPPASAPPSILVKPENSKNGIEKQVKTVRFQNYSPPPTKHSASGPTSGKHEQPATLKGSQPEAVSSEGEMTILFAHRSGCHSGQQTDLRRKSAFSKTTPPVSTASVSQTLFPSK

Annotated regions:
phrase: MFVALHTYSAQGPEELDLKKGEGIRVLGKNQDGWLRGVSLVTGRTGIFPSDYVI
type: DOMAIN
name: SH3RF2_SH3_3
description: SH3RF2, third SH3 domain

phrase: PRAKALCNYRGKNPGDLKFNKGDVILLQRQLDENWYQGEINGVSGFFPASSVE
type: DOMAIN
name: SH3RF2_SH3_1
description: E3 ubiquitin-protein ligase SH3RF2, first SH3 domain

phrase: AKALCNYRGKNPGDLKFNKGDVILLQRQLDENWYQGEINGVSGFFPASSVEV
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: DGVPRAKALCNYRGKNPGDLKFNKGDVILLQRQLDENWYQGEINGVSGFFPASSVEVIK
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: PLCRALYNFDLRDKDKSENQDCLTFLKDDVITVISRVDENWAEGKLGDKVGIFPILFVEPN
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: PRAKALCNYRGKNPGDLKFNKGDVILLQRQLDENWYQGEINGVSGFFPASSVEVI
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: NMFVALHTYSAQGPEELDLKKGEGIRVLGKNQDGWLRGVSLVTGRTGIFPSDYVIPV
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: CPVCFEKLDVTAKVLPCQHTFCKPCLQRIFKAHKELRCPEC
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: CQHTFCKPC
type: CONSERVED_SITE
name: Znf_RING_CS
description: Zinc finger, RING-type, conserved site

phrase: ECPVCFEKLDVTAKVLPCQHTFCKPCLQRIFKAHKELRCPEC
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: LCRALYNFDLRDKDKSENQDCLTFLKDDVITVISRVDENWAEGKLGDKVGIFPILF
type: DOMAIN
name: SH3RF2_SH3_2
description: E3 ubiquitin-protein ligase SH3RF2, second SH3 domain

phrase: LSTNMFVALHTYSAQGPEELDLKKGEGIRVLGKNQDGWLRGVSLVTGRTGIFPSDYVIPVF
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: CPVCFEKLDVTAKVLPCQHTFCKPCLQRIFKAHKELRCPE
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: VALHTYSAQGPEELDLKKGEGIRVLGKNQDGWLRGVSLVTGRTGIFP
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: SENQDCLTFLKDDVITVISRVDENWAEGKLGDKVGIF
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: LECPVCFEKLDVTAKVLPCQHTFCKPCLQRIFKAHKELRCPECRT
type: DOMAIN
name: SH3RF2_RING-HC_Zfn
description: E3 ubiquitin-protein ligase SH3RF2, RING finger, HC subclass

phrase: QPPPLCRALYNFDLRDKDKSENQDCLTFLKDDVITVISRVDENWAEGKLGDKVGIFPILFVEPNL
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: NMFVALHTYS
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: EELDLKKGEGIRVLG
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: RTGIFPSDYVIP
type: DOMAIN
name: SH3_domain
description: SH3 domain
Protein sequence:
MEQNSRALIDGFNRKIDYLRMSVTDRCDFRCVYCMAEDMQFLPRQQILSLEELFQVAERFVALGTRKIRLTGGEPLVRQGIVDLCGRIAALPGLRELCLTSNGSQLGRLAQPLFDAGVTRLNISLDSLDADRFKQLTRTGDLAQVIAGIDAARQAGFKRTKLNCVVLKGRNDHELVDLVRFAIERELDITFIEEMPLGVISEHERGESFCSSDEVRARLAEQFTLVESTESSMGPARYWRLAEAANTRVGFISPHSHNFCATCNRVRLTVEGRLLLCLGNEHSVDLKHVLRAHPGNPERLEKAIRDSLHLKPYRHHFEVGGDVQILRFMNMTGG

Annotated regions:
phrase: VTDRCDFRCVY
type: CONSERVED_SITE
name: MoaA_NifB_PqqE_Fe-S-bd_CS
description: MoaA/NifB/PqqE, iron-sulphur binding, conserved site

phrase: DYLRMSVTDRCDFRCVYCMAEDMQFLPRQQILSLEELFQVAERFVALGTRKIRLTGGEPLVRQGIVDLCGRIAALPGLRELCLTSNGSQLGRLAQPLFDAGVTRLNISLDSLDADRFKQLTRTGDLAQVIAGIDAARQAGFKRTKLNCVVLKGRNDHELVDLVRFAIERELDITFIEEMPLGVISEHERGESFCSSDEVRARLA
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: DITFIEEMPLGVISEHERGESFCSSDEVRARLAEQFTLVESTESSMGPARYWRLAEAANTRVGFISPHSHNFCATCNRVRLTVEGRLLLCLGNEHSVDLKHVLRAHPGNPERLEKAIRDSLHLKPYRHH
type: DOMAIN
name: MoaA_twitch
description: Molybdenum cofactor biosynthesis protein A-like, twitch domain

phrase: HSHNFCATCNRVRLTVEGRLLLCLGNEHSVDLKHVLRAHPGNPERLEKAIRDSLHLKPYRHHFEVGGDV
type: DOMAIN
name: MoaA_twitch
description: Molybdenum cofactor biosynthesis protein A-like, twitch domain

phrase: MSVTDRCDFRCVYCMAEDMQFLPRQQILSLEELFQVAERFVALGTRKIRLTGGEPLVRQGIVDLCGRIAALPGLRELCLTSNGSQLGRLAQPLFDAGVTRLNISLDSLDADRFKQLTRTGDLAQVIAGIDAARQAGFKRTKLNCVVLKGRNDHELVDLVRF
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: RALIDGFNRKIDYLRMSVTDRCDFRCVYCMAEDMQFLPRQQILSLEELFQVAERFVALGTRKIRLTGGEPLVRQGIVDLCGRIAALPGLRELCLTSNGSQLGRLAQPLFDAGVTRLNISLDSLDADRFKQLTRTGDLAQVIAGIDAARQAGFKRTKLNCVVLKGRNDHELVDLVRFAIERELDITFIEEMPLGVISEHERGESFCSSDEVRARLAEQFTLVESTESSMGPARYWRLAEAANTRVGFISPHSHNFCATCNRVRLTVEGRLLLCLGNEHSVDLKHVLRAHPGNPERLEKAIRDSLHLKPYRHHFE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: GFNRKIDYLRMSVTDRCDFRCVYCMAEDMQFLPRQQILSLEELFQVAERFVALGTRKIRLTGGEPLVRQGIVDLCGRIAALPGLRELCLTSNGSQLGRLAQPLFDAGVTRLNISLDSLDADRFKQLTRTGDLAQVIAGIDAARQAGFKRTKLNCVVLKGRNDHELVDLVRFAIERELDITFIEEMPLGVISEHERGESFCSSDEVRARLAEQFTLVESTESSMGP
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MQVTEINAQGLKREFQVLLAAQELEERLTNELSGMKDKVQLKGFRPGKVPVAHLRKVYGRSVMAEVVQNAVNEANRQIVTDNGLKLALEPQVEFPTDQAEVEKALDAKGDLAFKVALEVMPSFELADLSDVSLTKLVAKPSDAEVDEALDRMAGQSRPFTEREEGAEAQSGDRVTIDFVGRIDGEEFQGGKGEGIDLELGSGSFIPGFEDQLVGAKVGDKRLVKVTFPESYGAEHLAGKDAEFDVTVTKIQAAGEAKIDDEFAKSMGMESLEKLREAVSEAIGRDFEAASRRRLKKELLDALDGKYAFELPPSLVAQEFAAVWAQVEQDLKTRGKTFEDEDTTEEKAQAEYRKIAERRVRLGLVLAQVGESADIKVSDEEVNQALIARVRQFPGQEQQVWDFYRKNAQALAELRAPLFEEKVVDHVLGQVKLVEEPVSKEALFADEDGDDTTGGKPADKAEAKDESKTEAKAD

Annotated regions:
phrase: EAQSGDRVTIDFVGRIDGEEFQGGKGEGIDLELGSGSFIPGFEDQLVGAKVGDKRLVKVTFPESYGAEHLAGKDAEFDVT
type: DOMAIN
name: PPIase_FKBP_dom
description: FKBP-type peptidyl-prolyl cis-trans isomerase domain

phrase: GDRVTIDFVGRIDGEEFQGGKGEGIDLELGSGSFIPGFEDQLVGAKVGDKRLVKVTFPESYGA
type: DOMAIN
name: PPIase_FKBP_dom
description: FKBP-type peptidyl-prolyl cis-trans isomerase domain

phrase: SLEKLREAVSEAIGRDFEAASRRRLKKELLDALDGKYAFELPPSLVAQEFAAVWAQVEQDLKTRGKTFEDEDTTEEKAQAEYRKIAERRVRLGLVLAQVGESADIKVSDEEVNQALIARVRQFPGQEQQVWDFYRKNAQALAELRAPLFEEKVVDHV
type: DOMAIN
name: Trigger_fac_C
description: Trigger factor, C-terminal

phrase: MQVTEINAQGLKREFQVLLAAQELEERLTNELSGMKDKVQLKGFRPGKVPVAHLRKVYGRSVMAEVVQNAVNEANRQIVTDNGLKLALEPQVEFPTDQAEVEKALDAKGDLAFKVALEVMPSFELADLSDVSLTKLVAKPSDAEVDEALDR
type: DOMAIN
name: Trigger_fac_ribosome-bd_bac
description: Trigger factor, ribosome-binding, bacterial
Protein sequence:
MPSNPTRKGRVVVGMSGGVDSSVTAWLLKQQGYEVVGLFMKNWEDDDDSEYCSTRQDLLDAASVADLVGVEFEYVNFAAEYKDRVFAEFLREYSAGRTPNPDVLCNAEIKFKAFLDHAMALGAEHIATGHYARVRTVETPAGPRHQLLKALDDTKDQSYFLHRLNQAQLARTLFPLGELRKTEVRRIAHEIGLHNAAKKDSTGICFIGERPFREFLNRYLPSEPGPILTPEGQRVGTHHGLSFYTLGQRKGLGVGGVKGRQRDDGTAEAWYAARKDLARNVLYVVQGHDHPWLLSAQLQAQDASWIAGEPPAAGAYGAKTRYRQVDAACRLDQAGGERFALAFEQAQWAVTPGQSAVLYDGEVCLGGGIII

Annotated regions:
phrase: QLQAQDASWIAGEPPAAGAYGAKTRYRQVDAACRLDQAGGERFALAFEQAQWAVTPGQSAVLYDGEVCLGGGI
type: DOMAIN
name: MnmA-like_C
description: tRNA-specific 2-thiouridylase MnmA-like, C-terminal domain

phrase: EFLNRYLPSEPGPILTPEGQRVGTHHGLSFYTLGQRKGLGVGGVKGRQRDDGTAEAWYAARKDLARNVLYVV
type: DOMAIN
name: MnmA-like_central
description: tRNA-specific 2-thiouridylase MnmA-like, central domain
Protein sequence:
MEQVKNKKLYTGKVVSDKMDKTITVQVETHRVHRIYGKAVKVSKKFHAHDENNVAKMGDTVTIAEHRPLSKTKKFILVSVDKTAEIV

Annotated regions:
phrase: GDTVTIAEHRPL
type: CONSERVED_SITE
name: Ribosomal_uS17_CS
description: Small ribosomal subunit protein uS17, conserved site
Protein sequence:
MDFLEIVGQVPLKGEVEISGAKNSALPILAATLLSRQEVKIKSLPQVVDIKAMALLLQNLGASLEWLNPNTLQIGAKSLNHTEATYDLVRKMRASILVLGPLLARFKECLVSLPGGCAIGARPVDLHLKAMQQLGAKITIEQGYIHAKAPKGLKGNDILFDKISVTGTENALMAASLAKGITRIINAAKEPEIAQLCAFLQSGGVEIHGIGSSELKIRGVENDALNLKDIQIIPDRIEAGTYLCVGAITNSQLKINHIIPNHLQAITDKLIEIGFSLDIQENSIEIHPAKKRQAFEITTKEYPGFPTDMQAQFMALATQCLGTSVIEETLFENRFMHASELQRLGANISLKTNVATISGSTELTGSDVMATDLRASSALVLAALVAKGVSRVHRIYHLDRGYERLEDKINALGAKVARLKEK

Annotated regions:
phrase: QVPLKGEVEISGAKNSALPILAATLLSRQEVKIKSLPQVVDIKAMALLLQNLGASLEWLNPNTLQIGAKSLNHTEATYDLVRKMRASILVLGPLLARFKECLVSLPGGCAIGARPVDLHLKAMQQLGAKITIEQGYIHAKAPKGLKGNDILFDKISVTGTENALMAASLAKGITRIINAAKEPEIAQLCAFLQSGGVEIHGIGSSELKIRGVENDALNLKDIQIIPDRIEAGTYLCVGAITNSQLKINHIIPNHLQAITDKLIEIGFSLDIQENSIEIHPAKKRQAFEITTKEYPGFPTDMQAQFMALATQCLGTSVIEETLFENRFMHASELQRLGANISLKTNVATISGSTELTGSDVMATDLRASSALVLAALVAKGVSRVHRIYHLDRGYERLED
type: DOMAIN
name: Enolpyruvate_Tfrase_dom
description: Enolpyruvate transferase domain
Protein sequence:
MLFNKDKNNIGGRSIESTGFAWWSGNARLINLSGKLLGAHVAHAGLIVFWTGAMTLFETSHFIPEKPLYEQGMILLPHLATLGWGVAPGGEIVNTYPYFATGVIHLVSSAVLGFGGIYHSIVGPDVLEDSFSFFGYDWRDKNKMTTILGIHLILLGIGAFLLVIKALFIGGIYDTWAPGGGDIRFITNPTLNPAIIFSYLLKSPFGGEGWIVGVNNMEDVIGGHIWIGVTCVIGGIWHILTRPFSWARRAFVWSGEAYLSYSLGALALMGQTAAEYAWYNNTVYPSEFYGPTAAEASQAQAFTFLVRDQRLGANIASTQGPTGLGKYLMRSPTGEVILGGETMRFWDLRAPWLEPLRSSNGLDLNKIKNDIQPWQERRAAEYMTHAPLGSLNSVGGVATEINSVNYVSPRSWLTTSHFFLGFFIFIGHLWHAGRARAAAAGFEKGINRENEPVLSMRPLD

Annotated regions: