nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MLDIKYADISALIKKKISDFHYKNEIIESGIIINIGDGVANVYGLFNAIYGEIVEFENGLKGIVLNLEEENVGIILIGSSKGIKEGDKVIRTGMISSINVGECMLGRVINSLGVPIDGKGPIYGNLFLMPLERKAPGVIYREPVIEPLQTGIKCIDSMIPIGRGQRELIIGDRQTGKTTLAIDTIINQKKFYDMGNPVYCIYVSIGKKASTIASIVKLLEENDALSYTVILTANASDSAAMQVFAPFSGTAIGEFFRDTGRSALIIYDDLSKQAVAYREISLLLRRPPGREAYPGDIFYLHSRLLERSSKIISDNKIASKMNDVPKSIEKKILGGGSLTSLPIIETQFGDVSSYIPTNVISITDGQIFLETNLFNSGIRPAINEGISVSRVGASAQIKSMKKISGTFKLDQAQFRELESFSQFGSDLDSTTKNIIEKGKRNIEILKQSINSPYRLGYQIAIIYAGTNNLLKEIPLNKVKFFEKKYLNYLNDKYSSIIDLLEEGEINENIFSILNNVALKIINKFFN

Annotated regions:
phrase: GIKCIDSMIPIGRGQRELIIGDRQTGKTTLAIDTIINQKKFYDMGNPVYCIYVSIGKKASTIASIVKLLEENDALSYTVILTANASDSAAMQVFAPFSGTAIGEFFRDTGRSALIIYDDLSKQAVAYREISLLLRRPPGREAYPGDIFYLHSRLLERSSKIISDNKIASKMNDVPKSIEKKILGGGSLTSLPIIETQFGDVSSYIPTNVISITDGQIFLETNLFNSGIRPAINEGISV
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_nucl-bd
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain

phrase: QIKSMKKISGTFKLDQAQFRELESFSQFGSDLDSTTKNIIEKGKRNIEILKQSINSPYRLGYQIAIIYAGTNNLLKEIPLNKVKFFEKKYLNYLNDKYSSIIDLLEEGEINENIFSILNN
type: DOMAIN
name: ATP_synth_asu_C
description: ATP synthase, alpha subunit, C-terminal

phrase: ISSINVGECMLGRVINSLGVPIDGKGPIYGNLFLMPLERKAPGVIYREPVIEPLQTGIKCIDSMIPIGRGQRELIIGDRQTGKTTLAIDTIINQKKFYDMGNPVYCIYVSIGKKASTIASIVKLLEENDALSYTVILTANASDSAAMQVFAPFSGTAIGEFFRDTGRSALIIYDDLSKQAVAYREISLLLRRPPGREAYPGDIFYLHSRLLERSSKIISDNKIASKMNDVPKSIEKKILGGGSLTSLPIIETQFGDVSSYIPTNVISITDGQIFLETNLFNSGIRPAINEGISVSRV
type: DOMAIN
name: ATP_synth_F1_a_nt-bd_dom
description: ATP synthase, F1 complex, alpha subunit nucleotide-binding domain

phrase: PAINEGISV
type: ACTIVE_SITE
name: ATPase_a/bsu_AS
description: ATPase, alpha/beta subunit, nucleotide-binding domain, active site

phrase: ESGIIINIGDGVANVYGLFNAIYGEIVEFENGLKGIVLNLEEENVGIILIGSSKGIKEGDKVIRT
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_N
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain

phrase: MKKISGTFKLDQAQFRELESFSQFGSDLDSTTKNIIEKGKRNIEILKQSINSPYRLGYQIAIIYAGTNNLLKEIPLNKVKFFEKKYLNYLNDKYSSIIDLLEEGEINENIFSILNNVALKIINK
type: DOMAIN
name: ATP_synth_asu_C
description: ATP synthase, alpha subunit, C-terminal
Protein sequence:
MQYHEQFDVIVVGGGHAGTEAATAAARMGLNTLLLTHNIDTLGHMSCNPAIGGIGKGHLVKEVDALGGIMARATDLAGIQFRTLNSSKGPAVRATRAQADRLLYKAVVRQMLENYPNLKIFQQACDDLIMDGDRVAGVVTQSGIRISGKTVVLTVGTFLNGLIHIGMENYKGGRAGDPPSIALAQRLREMPLRIDRLKTGTPPRIDARSVDLSVMQAQYGDDPRPVFSFIGDASQHPRQVPCYVTHTNERTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKITRFADKTAHQIFVEPEGLTTHELYPNGISTSLPFDVQVQIVRSIRGFENAHITRPGYAIEYDFFDPRDLKANMESKYIGNLFFAGQINGTTGYEEAAAQGLMAGLNAGLRAQDKDPWHPRRDQAYMGVMIDDLSTLGTREPYRMFTSRAEYRLLLREDNADLRLTAIGRELGLVDDERWGKFNIKMEQVELERQRMRSTWIHPQHPSLEAVNALVNTPLTREQNLEELLRRPEVTYDALMAIEGVGPALSDHAAADQVEIQIKYAGYIERQYDEVEKQLRNENTLLPLDMNYRDVNGLSNEVIAKLNDAKPETIGQASRISGITPAAISILLVHLKKHGLLRKTA

Annotated regions:
phrase: IKYAGYIERQYDEVEKQLRNENTLLPLDMNYRDVNGLSNEVIAKLNDAKPETIGQASRISGITPAAISILL
type: DOMAIN
name: MnmG_C_subdom
description: tRNA uridine 5-carboxymethylaminomethyl modification enzyme, C-terminal subdomain

phrase: DVIVVGGGHAGTEAATAAARMGLNTLLLTHNIDTLGHMSCNPAIGGIGKGHLVKEVDALGGIMARATDLAGIQFRTLNSSKGPAVRATRAQADRLLYKAVVRQMLENYPNLKIFQQACDDLIMDGDRVAGVVTQSGIRISGKTVVLTVGTFLNGLIHIGMENYKGGRAGDPPSIALAQRLREMPLRIDRLKTGTPPRIDARSVDLSVMQAQYGDDPRPVFSFIGDASQHPRQVPCYVTHTNERTHDVIRNNLDRSPMYAGVIEGIGPRYCPSIEDKITRFADKTAHQIFVEPEGLTTHELYPNGISTSLPFDVQVQIVRSIRGFENAHITRPGYAIEYDFFDPRDLKANMESKYIGNLFFAGQINGTTGYEEAAAQGLMAGLNAGLRAQD
type: DOMAIN
name: MnmG_N
description: MnmG, N-terminal domain

phrase: EKQLRNENTLLPLDMNYRDVNGLSNEVIAKLNDAKPETIGQASRISGITPAAISIL
type: DOMAIN
name: MnmG_C
description: tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG, C-terminal

phrase: AGQINGTTGYEEAAAQGLMAGLN
type: CONSERVED_SITE
name: MnmG-rel_CS
description: MnmG-related, conserved site

phrase: GPRYCPSIEDKITR
type: CONSERVED_SITE
name: MnmG-rel_CS
description: MnmG-related, conserved site

phrase: DERWGKFNIKMEQVELERQRMRSTWIHPQHPSLEAVNALVNTPLTREQNLEELLRRPEVTYDALMAIEGVGPALSDHAAADQVEIQIKYAGYIER
type: DOMAIN
name: GIDA_C_N
description: tRNA uridine 5-carboxymethylaminomethyl modification enzyme, C-terminal, N-terninal subdomain
Protein sequence:
MARHGDTRSPSPVGSTYSSSRRNRRDDDRYERSRRDDGRSYRRSRSPERRYRERERDRDRDAFRRRDRSLDRRDEDSYRPGRRERSRDRRRSRERDDYRRRSRDRDYRSRREDSRDRARRRTDDSADLKYKSRRDDSRDRAKDAPRSRETSKPSTPAATAAPTEDEKRAERLAKLEAWKQKQAAEKERKQREAAAAGGARSILEEIDRKSGLSPAVSSPQSPATPGVDATPGTYTGKFDPKAIAKSASSTPAPPAVLGNDVAVPPSVKPVTTIPSQVKPKSTTSASATLKAKGNVGGFGLGTKQAADTEKSTATKTLGFGEEESTRRKLERLPTPPLEDAKDVNGTADGAADEDEDDVDMQDGGTEEEAAAAARAAAERREERLQSEAIKAQSNGAESNDTVMGDAPSQEAADNMEVDAQEEEEIDPLDAFMSELAESAPPKKKVGAKFSRTKEQQPEALFGDEHDIDMTAVGDGDADDFLAIANKAKKKKDIPAVDHKKVEYETFRKKFYTEPSDLAQMSDEEAASLRLELDGIKVRGVDVPKPVQKWSQCGLGVQTLDVIDKLGYEKTTSIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLIPMFRHIKDQRPLDNMEGPVGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIADLKRGAEIIVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMANIRPDRQTVLFSATFPRNMEALARKTLTKPIEIVVGGKSVVAPEITQIVEVRNDDQKFVRLLELLGNLYSSDENEDARALIFVDRQEAADALLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYSVDIAKALKQSGQKVPEPVQKLVDAFLEKVKAGKEKASASGFGGKGLERLDQERDAARMRERRTYKTGEEGEDEEEKEEKNEQAEERFNKAISSVQSTAAPSLPGVPKGIDLDGKITVHKTEKDPNSTSKNPLDKVGSAVADIHARLSRAGVMRSGVPIDNRGPDAGAFHATLEINDFPQKARWAVTNRTNVAKILEATGTSITTKGSFYPTGKVPGPGENPKLYILVEGETELAVTNAMRELMRLLKEGTIAAADSDARAPVGGRYNVV

Annotated regions:
phrase: VLDEADRM
type: CONSERVED_SITE
name: RNA-helicase_DEAD-box_CS
description: ATP-dependent RNA helicase DEAD-box, conserved site

phrase: TSIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLIPMFRHIKDQRPLDNMEGPVGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIADLKRGAEIIVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMANIRPDRQTVLFSATFPRNME
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: DALLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRA
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: GYEKTTSIQAQAIPAIMSGRDVIGVAKTGSGKTIAFLIPMFRHIKDQRPLDNMEGPVGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIADLKRGAEIIVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMANIRPDRQTVLFSATFPRNMEALARKTLTKPIEIVVGGKSVVAPEITQ
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: RLLELLGNLYSSDENEDARALIFVDRQEAADALLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRAGNTGTAVTFLTEDQERYSVDIAKALKQSGQKVPEPVQKL
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: QKWSQCGLGVQTLDVIDKLGYEKTTSIQ
type: DOMAIN
name: RNA_helicase_DEAD_Q_motif
description: RNA helicase, DEAD-box type, Q motif

phrase: TLEINDFPQKARWAVTNRTNVAKILEATGTSITTKGSFYPTGKVPGPGENPKLYILVEGETELAVTNAMRELMRLLKE
type: DOMAIN
name: PRP5/DDX46/KHDC4_KH
description: ATP-dependent RNA helicase PRP5/DDX46/KHDC4, KH domain

phrase: IPAIMSGRDVIGVAKTGSGKTIAFLIPMFRHIKDQRPLDNMEGPVGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAPIKDQIADLKRGAEIIVCTPGRMIDLLAANAGRVTNLRRVTYVVLDEADRMFDMGFEPQVMKIMANIRPDRQTVLFSATFPRNMEALARKTLTKPIE
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: RLLELLGNLYSSDENEDARALIFVDRQEAADALLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFPVLIATSVAARGLDVKQLKLVVNYDAPNHLEDYVHRAGRTGRA
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like
Protein sequence:
MALQPAAGARDLNPRQVESNRALSERLASVFRLWGYDEVSPPRVERLDTLMAGGAIASEDVVRLVADEPLGLRPEMTASIARAACTRLASRPRPLRLWASGTVFQSRAADEGGQCIEENLQCGVELFGVAPIEAEMELLSLLMAAVERLDFQAQHQPRLLMGHTGLMDLLLSPVPPVLRDAVRAALIQYDRLGLETIELEEGLRATLLSLLDCRGTPNEVLERLSSCFGAQALFDDLHRLCRQLQGPAAAQGVRLQLDPTFQPRFELYTGLVFQLVCDTHSAPVVVARGGRYDDLVRRCGAQPGQDFGAGFSLAIDPIRELLSDSSSNPTVAPQLMVAFSERSTLEAALERQRWWHQQGRSAVIELHPFSTRSLAEQQATDQGGFQLDWIDP

Annotated regions:
phrase: GARDLNPRQVESNRALSERLASVFRLWGYDEVSPPRVERLDTLMAGGAIASEDVVRLVADEPLGLRPEMTASIARAACTRLASRPRPLRLWASGTVFQSRAADEGGQCIEENLQCGVELFGVAPIEAEMELLSLLMAAVERLDFQAQHQPRLLMGHTGLMDLLLSPVPPVLRDAVRAALIQYDRLGLETIELEEGLRATLLSLLDCRGTPNEVLERLSSCFGAQALFDDLHRLCRQLQGPAAAQGVRLQLDPTFQPRFELYTGLVFQLVCDTHSAPVVVARGGRYDDLVRRCGAQPGQDFGAGFSLAIDP
type: DOMAIN
name: HisRS-like_core
description: Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain
Protein sequence:
MTTTETTAQPWWGKGSVSATLLILFVFAASLAADKWVSNSQLTLPLLLAAVVSMAVAGLGIPRLKALKMGQVIREEGPSGHQSKSGTPTMGGLLVVPVGVILGSWITREPEASQQLLAVSGVTLAYMLIGGFDDWRSLTRRTNTGLTPRGKLLLQTTAAFVFLAIAAWQGWINSSVALPFGQSLPLGLLIWPLGLFVFLAESNATNLTDGLDGLASGCGALVFTGLALQLMLRGNHGDPALAGYCMTMAGTWLGFLVFNRHPARVFMGDTGSLAMGAALTAIALLSNSLWPLLVMGGVFLAESLSVIIQVWVFKATKGADGQGRRVFRMAPLHHHFELGGTSERTLVPCFWTATAALVVLGLLLRPFG

Annotated regions:
phrase: KSGTPTMGGL
type: CONSERVED_SITE
name: PNAcMuramoyl-5peptid_Trfase_CS
description: Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site

phrase: KSGTPTMGGLLV
type: CONSERVED_SITE
name: PNAcMuramoyl-5peptid_Trfase_CS
description: Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site

phrase: NATNLTDGLDG
type: CONSERVED_SITE
name: PNAcMuramoyl-5peptid_Trfase_CS
description: Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site
Protein sequence:
MAAGKFASYHRNVQMNHPLVSSMDLLGSKSALGERRSDAFKNVCIHGTLPRKKKERVPIRSSDMFCHMGTLPHTKSHRLPNPLMQDIKEDYPFQERRTGIFNMREHYLDPAMEYVKFSKDRYIMDGGTPDKLKKELEEELKLNSEDLRSHAWYHGRIPRQVSESLVKRDGDFLIRDSLSSPGNLVLTCQWKNLSQHFKINKVVIRLNEAYCRIQYQLEHESFDSIPALVRFYVGNRKAVSQQSGAIIFQPINRTVPLRCIEEKYGTSPVRRLELGIMEVKSEPTKRLSLNFGQGISQEQSLVRGNLLRNKEKSGSQPACLDNMREKRRPLKAHQSESYLPLGSRQPCLSQGMDMKTSPKPHVFRTGSEPTLSPTEIRRFNHEVHPVEALRGSDSQLCPRPPPKPTKAPSIKQSQSPLVWQSSEANYCEFHPTPPEDCAWSDSHSSHNSYIEDQRTDEIETLSFSNSELSFPALDDSISQCSATDFCGNVEDDEFIRPVYETVSSFCPNDFQSVLLTAENKPLETSLLRRAKELFTNNDPRTIAKHILRMDCKVARILDVTPEVERMMGVSSGLELIILPYGHQLRLDLMERHSTMAIGIAVDILGCTGNLEERVATLHKIIQLAVEVKTLGDYFAFSAIMKALDMPQITRLEQTWTMLRHQYTQTAITYEKQLKPFSKYLHEGEALDAQEDVTVPLVMPLVTLLERQSVLFEGMDFWENNDRGCEILFNHLQTARQVAHNATVYKKNAQRILEGFKPDELMSEIFKTEFQMRLLWGSKGALLKQSERYHKFGQILTALSRKLEPPS

Annotated regions:
phrase: HAWYHGRIPRQVSESLVKRDGDFLIRDSLSSPGNLVLTCQWKNLSQHFKINKVVIRLNEAYCRIQYQLEHESFDSIPALVRFYVGNRK
type: DOMAIN
name: SH2
description: SH2 domain

phrase: DPRTIAKHILRMDCKVARILDVTPEVERMMGVSSGLELIILPYGHQLRLDLMERHSTMAIGIAVDILGCTGNLEERVATLHKIIQLAVEVKTLGDYFAFSAIMKALDMPQITRLEQTWTMLRHQYTQTAITYEKQLKPFSKYLHEGEALDAQEDVTVPLVMPLVTLLERQSVLFEGMDFWENNDRGCEILFNHLQTARQVAHNATVYKKNAQRILEGFKPDELMSEIFKTEFQMRLLWGSKGALLKQSERYHKFGQILTALSRKLEP
type: DOMAIN
name: RASGEF_cat_dom
description: Ras guanine-nucleotide exchange factors catalytic domain

phrase: HSTMAIGIAVDILGCTGNLEERVATLHKIIQLAVEVKTLGDYFAFSAIMKALDMPQITRLEQTWTMLRHQYTQTAITYEKQLKPFSKYLHEGEALDAQEDVTVPLVM
type: DOMAIN
name: RASGEF_cat_dom
description: Ras guanine-nucleotide exchange factors catalytic domain

phrase: FTNNDPRTIAKHILRMDCKVARILDVTPEVERMMGVSSGLELIILPYGHQLRLDLMERHSTMAIGIAVDILGCTGNLEERVATLHKIIQLAVEVKTLGDYFAFSAIMKALDMPQITRLEQTWTMLRHQYTQTAITYEKQLKPFSKYLHEGEALDAQEDVTVPLVMPLVTLLERQSVLFEGMDFWENNDRGCEILFNHLQTARQVAHNATVYKKNAQRILEGFKPDELMSEIFKTEFQMRLLWGSKGALLKQSERYHKFGQILTALSRKLEPP
type: DOMAIN
name: RASGEF_cat_dom
description: Ras guanine-nucleotide exchange factors catalytic domain

phrase: WYHGRIPRQVSESLVKRDGDFLIRDSLSSPGNLVLTCQWKNLSQHFKINKVVIRLNEAYCRIQYQLEHESFDSIPALVRF
type: DOMAIN
name: SH2
description: SH2 domain

phrase: EDLRSHAWYHGRIPRQVSESLVKRDGDFLIRDSLSSPGNLVLTCQWKNLSQHFKINKVVIRLNEAYCRIQYQLEHESFDSIPALVRFYVGNRKAVSQQSGAIIFQPINRTVPLRCIEEKYGTSPVRRLELGIMEV
type: DOMAIN
name: SH2_SHEP1/BCAR3/NSP1
description: SHEP1/BCAR3/NSP1, SH2 domain

phrase: WYHGRIPRQVSESLVKRDGDFLIRDSLSSPGNLVLTCQWKNLSQHFKINKVVIRLNEAYCRIQYQLEHESFDSIPALVRFYVGNRKAVSQQSGAIIFQP
type: DOMAIN
name: SH2
description: SH2 domain
Protein sequence:
MRHKININNHIEIFDTDKVAKQAAGAVLMQEKNAVVLATVAREEKMVEEDFLPLTVQYIEKAYAAGKIPGGYVKRETKPGDSETLSARIIDRSLRPLFPKGYAYPTQIVVMVLSADPEVDLQVMSLNAASVALYLSDIPIKAPVCGVRIGRINNEFVLNPSNSELKNSTLDLYVAGVKDELLMIEMRALSNKKDNQHCMNELSEDDTLKALDFASSAILRGSNEYEKAFAAYRKNSKLEFKIESDNIQIIDYIKNTYITKLKIAINQMAKSERASEILQIAKEIESESMAIENEWKFEDIEKALHVCKRELVRNQIINENKRADGRGLKDVRKIDIETNILPSAHGSCLFTRGQTQALVVATLGNDNDAQMSDMLTEKNPICEKFMVNYNFPGFSVGEASPIKAPGRRELGHGNLAKRALYPSVDADYIHTIRLVSEILESNGSSSMATVCGGALALRAAGVKSEKLVAGVAMGLVFEEEKYAILTDIMGLEDHDGDMDFKVAGSHDGITALQMDIKLGGIEQKVLQEALYQAKEARGYILNLMQEACEKIIVNEAILPKVEIFNVDPNKIPDIIGQGGKTIKDIIEKFEVNIDLDRDKGEVKIAGIDHNLISQSKEYILNLLHSKGSNKRRDKKEMPKFDIGEEFLGRVQKVVEFGVFVELKEGVDGLLHNSKIKEKLEVGHEIKVKVAEIKNGKVSLDLA

Annotated regions:
phrase: IFNVDPNKIPDIIGQGGKTIKDIIEKFEVNIDLDRDKGEVKIAGIDHNLISQSKEY
type: DOMAIN
name: KH_dom_type_1
description: K Homology domain, type 1

phrase: IDYIKNTYITKLKIAINQMAKSERASEILQIAKEIESESMAIENEWKFEDIEKALHVCKRELVRNQIINENKRADG
type: DOMAIN
name: PNPase_PH_RNA-bd_bac/org-type
description: Polyribonucleotide nucleotidyltransferase, RNA-binding domain

phrase: GEEFLGRVQKVVEFGVFVELKEGVDGLLHNSKIKEKLEVGHEIKVKVAEIKNGKVSLDL
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: VRKIDIETNILPSAHGSCLFTRGQTQALVVATLGNDNDAQMSDMLTEKNPICEKFMVNYNFPGFSVGEASPIKAPGRRELGHGNLAKRALYPSVDADYIHTIRLVSEILESNGSSSMATVCGGALALRAAG
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1

phrase: TDKVAKQAAGAVLMQEKNAVVLATVAREEKMVEEDFLPLTVQYIEKAYAAGKIPGGYVKRETKPGDSETLSARIIDRSLRPLFPKGYAYPTQIVVMVLSADPEVDLQVMSLNAASVALYLSDI
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1

phrase: LPKVEIFNVDPNKIPDIIGQGGKTIKDIIEKFEVNIDLDRDKGEVKIAGIDHNLISQSKEYILNLL
type: DOMAIN
name: KH_dom
description: K Homology domain

phrase: LVAGVAMGLVFEEEKYAILTDIMGLEDHDGDMDFKVAGSHDGITALQMDIKLGGIEQKVLQEALYQAKE
type: DOMAIN
name: ExoRNase_PH_dom2
description: Exoribonuclease, phosphorolytic domain 2

phrase: PVCGVRIGRINNEFVLNPSNSELKNSTLDLYVAGVKDELLMIEMRALSNKKDNQHCMNELSEDDTLKALDFAS
type: DOMAIN
name: ExoRNase_PH_dom2
description: Exoribonuclease, phosphorolytic domain 2

phrase: DIGEEFLGRVQKVVEFGVFVELKEGVDGLLHNSKIKEKLEVGHEIKVKVAEIKNGKVSLDL
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: FDIGEEFLGRVQKVVEFGVFVELKEGVDGLLHNSKIKEKLEVGHEIKVKVAEIKNGKVSL
type: DOMAIN
name: S1_domain
description: S1 domain
Protein sequence:
MKIGVFDSGVGGFSVLKSLLKAQIFDEIIYYGDSARVPYGTKDPTTIKQFGLEALDFFKPHQIKLLIVACNTASALALEEMQKHSKIPIVGVIEPSILAIKQQVKDKNAPILVLGTKATIQSNAYDNALKQQGYLNVSHLATSLFVPLIEESILEGELLETCMRYYFTPLEILPEVVILGCTHFPLIAQKIEGYFMEHFALSTPPLLIHSGDAIVGYLQQKYALKKNACAFPKVEFHASGDVVWLEKQAKEWLKL

Annotated regions:
phrase: VILGCTHFPL
type: ACTIVE_SITE
name: Asp/Glu_racemase_AS_2
description: Asp/Glu racemase, active site 2

phrase: IVACNTAS
type: ACTIVE_SITE
name: Asp/Glu_racemase_AS_1
description: Asp/Glu racemase, active site 1
Protein sequence:
MEDEIKSFEKDRNLIIEDSKNSKNNIVDVQKLIEALKDEKNAKNIVVDFTEYNPLHNGHKYCMDFGKSEGLFISVIPGPLERSGRGIPYLVNRHIRAEMALLAGADLVVEGPPMGIMGSGQYMQCLIKIFSALNGDIIPRGYIEEETMERVINSINNGNHIKIKPYNISCIETREKLGEKLEIDNYVIASMSYTIYKLKENFPKWNPKFKFIERIEGISGTKIREGVFNNNFESIKHMLPITTIDVFKNFGDNLSEIILKRNEEMVLDTVNNFDLNKYLPENISEKLNEKEYYESIEEIKEYIPRGFSKNNIERTISKLEARIEKETISKYIENYPANLRILNGINNHE

Annotated regions:
phrase: EEETMERVINSINNGNHIKIKPYNISCIETREKLGEKLEIDNYVIASMSYTIYKLKENFPKWNPKFKFIERIEGISGTKIREGVFNNNFESIKHMLPITTIDVFKNFGDNLSEIILKRNEEMVLDTVNNFDLNKYLPENISEKLNEKEYYESIEEIKEYIPRGFSKNNIERTISKLEARIEKETISKYIENYPANLRIL
type: DOMAIN
name: HIGH_NTase1_ass
description: Putative cytidyltransferase-related, C-terminal region
Protein sequence:
MGATALPPIWQMYLKDHRIYTFKNWPFLEDCSCTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDNPIEEHRKHSPGCAFLTVKKQVEELTVSEFLKLDKQRAKNKIAKETNNKQKEFEETRRTVRQSIEQLAALR

Annotated regions:
phrase: YLKDHRIYTFKNWPFLEDCSCTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDNPIEEHRKHSPGCAFLT
type: REPEAT
name: BIR_rpt
description: BIR repeat

phrase: DHRIYTFKNWPFLEDCSCTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDNPIEEHRKHSPGCAF
type: REPEAT
name: BIR_rpt
description: BIR repeat

phrase: RIYTFKNWPFLEDCSCTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDNPIEEHRKHSPGCAF
type: REPEAT
name: BIR_rpt
description: BIR repeat

phrase: RIYTFKNWPFLEDCSCTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDNPIEEHRKHSPGCAFL
type: REPEAT
name: BIR_rpt
description: BIR repeat
Protein sequence:
MHRSSYCREETTLCQGVNSTWVPPADTVPEASLTPHSPPAPDSPAPSPKPGYGYSACEEKPGDPRIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGQSWKNLTSAEKRPFVEEAERLRVQHLQDHPNYKYRPRRKKQAKKLKRMDPSHHLRNEGYTGGQPMVNLSHFRELHPLGGSGELESYGLPTPEMSPLDVLEPSEPAFFPPHMREDPDPGLFRTYQHEMDFSQEKTLREISLPYSTSPSHMGSFLRTPTPSAFYYKPHGGSSARTPLGQLSPPPEAPALDAMDHLNHAELWGDFDLNEFDQYLNMSRTQGPGYSFPMSKLGGPRTIPCEENSLISALSDASTAMYYTPCITG

Annotated regions:
phrase: RIRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGQSWKNLTSAEKRPFVEEAERLRVQHLQDHPNYK
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain

phrase: FRELHPLGGSGELESYGLPTPEMSPLDVLEPSEPAFFPPHMREDPDPGLF
type: DOMAIN
name: Sox7/17/18_central
description: Sox 7/17/18, central domain

phrase: KTLREISLPYSTSPSHMGSFLRTPTPSAFYYKPHGGSSARTPLGQLSPPPEAPALDAMDHLNHAELWGDFDLNEFDQYLNMSRTQGPGYSFPMSKLGGPRTIPCEENSLISALSDASTAMYYTPCI
type: DOMAIN
name: Sox_C
description: Sox, C-terminal

phrase: RRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGQSWKNLTSAEKRPFVEEAERLRVQHLQDHPNY
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain

phrase: IRRPMNAFMVWAKDERKRLAQQNPDLHNAVLSKMLGQSWKNLTSAEKRPFVEEAERLRVQHLQDHPNY
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain
Protein sequence:
MENRWQVMIVWQVDRMRIRTWKSLVKHHIHISKKAKGWSYRHHYENPHPRISSEVHIPLGSARLVVTTYWGLHTGERDWHLGQGVSIEWRENRYNTQVDPDLADQLIHLYYFDCFSESAIRKAIVGRVVSPRCDYQAGHNKVGSLQYLALTALIKPKQIKPPLPSVRKLTEDRWNKPQKTKGHRGSHTMNGH

Annotated regions:
Protein sequence:
MLQGKRIVLGISGGIAAYKGVELLRLLVKAGAEVHVIMTRNAQEFVTPLTFQTLSGNPVHTDLFNLYQEQEIGHISLADRADLLVIAPATANLVGKIAGGIADDLLTTTIMATKAPVLFAPAMNVNMWENPIYQRNQQTLTDLGYHFLAPVRGELACGWEGEGKLPDPQRILDECRRCLTPQRLAGRKVVVTAGPTREEIDPVRYLSNHSSGKMGYAIAAAAWRHGADVTLVSGPCALAAPAGVRLVAVDSAVAMRKAVLDETGSADIVVKAAAVADYRPKQRASQKMKKGNDGPTPPVELVRNPDILAELGEGKRDYLLVGFAAETNDLEENARAKLQAKNCDLLVANDVSAEGCGFEVDTNQVTVFSKDGRNEKWPCLGKDEVAERLIDLFAGQLGAAG

Annotated regions:
phrase: KRIVLGISGGIAAYKGVELLRLLVKAGAEVHVIMTRNAQEFVTPLTFQTLSGNPVHTDLFNLYQEQEIGHISLADRADLLVIAPATANLVGKIAGGIADDLLTTTIMATKAPVLFAPAMNVNMWENPIYQRNQQTLTDLGYHFLAPVRGELACGWEGEGKLPDPQRILDEC
type: DOMAIN
name: Flavoprotein
description: Flavoprotein

phrase: LAGRKVVVTAGPTREEIDPVRYLSNHSSGKMGYAIAAAAWRHGADVTLVSGPCALAAPAGVRLVAVDSAVAMRKAVLDETGSADIVVKAAAVADYRPKQRASQKMKKGNDGPTPPVELVRNPDILAELGEGKRDYLLVGFAAETNDLEENARAKLQAKNCDLLVANDVSAEGCGFEVDTNQVT
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal
Protein sequence:
MTNIGGPVVENASIEHPVISEEEGAAAFARVMAQLKAQVGIEAYTSWFGRLKLAEYSRNLVKLSVPTAFLRSWINNHYGSLLTNLWKQENSAILRVEVIVRGMKRVSKGVVCRTSAAPVVLEGQTASSFVESYTEPSVKDIEAGVFGSPLDSRYTFESFVEGSSNRVALAAARSIAEGHKSALRFNPLFIHASVGLGKTHLLQAVAAAALKRLMPARVIYLTAEYFMWRFATAIRDNAALSFKEQLRDIDLLIIDDMQFLQGKSIQNEFCHLLNMLLDSAKQVVVAADRPPAELESLDLRVRSRLQGGVALEIEVPDYEMRLKMLRQRLKVVQQDDNMVVISDEVLQYIAKTVLGSGRDIEGAFNQLLFRQSFESDLSLERIDELLGHLTRSGESKRIRIEEIQRAVARHYNVSKQDLLSNRRTRTVVKPRQVAMYLAKMLTPRSLPEIGRRFGGRDHTTVLHAVRKIEDLVCDDQTLAKELELLKRLIGEQAA

Annotated regions:
phrase: AFARVMAQLKAQVGIEAYTSWFGRLKLAEYSRNLVKLSVPTAFLRSWINNHYGSLLTNLW
type: DOMAIN
name: DnaA_N_dom
description: DnaA N-terminal domain

phrase: LDSRYTFESFVEGSSNRVALAAARSIAEGHKSALRFNPLFIHASVGLGKTHLLQAVAAAALKRLMPARVIYLTAEYFMWRFATAIRDNAALSFKEQLRDIDLLIIDDMQFLQGKSIQNEFCHLLNMLLDSAKQVVVAADRPPAELESLDLRVRSRLQGGVA
type: DOMAIN
name: DnaA_dom
description: Chromosomal replication initiator protein DnaA, ATPAse domain

phrase: IEEIQRAVARHYNVSKQDLLSNRRTRTVVKPRQVAMYLAKMLTPRSLPEIGRRFGGRDHTTVLHAVRK
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: RFNPLFIHASVGLGKTHLLQAVAAAALKRLMPARVIYLTAEYFMWRFATAIRDNAALSFKEQLRDIDLLIIDDMQFLQGKSIQNEFCHLLNMLLDSAKQVVVAADRPPAELESLDLRVRSRLQGGVA
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: RIEEIQRAVARHYNVSKQDLLSNRRTRTVVKPRQVAMYLAKMLTPRSLPEIGRRFGGRDHTTVLHAVRK
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: IEEIQRAVARHYNVSKQDLLSNRRTRTVVKPRQVAMYLAKMLTPRSLPEIGRRFGGRDHTTVLHAVRKIEDLVCDDQTLAKELELLKRL
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: IGRRFGGRDHTTVLHAVRK
type: CONSERVED_SITE
name: Chromosome_initiator_DnaA_CS
description: Chromosomal replication control, initiator DnaA, conserved site
Protein sequence:
MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYHHAS

Annotated regions:
phrase: ILHRDLKPQNLL
type: ACTIVE_SITE
name: Ser/Thr_kinase_AS
description: Serine/threonine-protein kinase, active site

phrase: FKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPW
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: FKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPW
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: FKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPW
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: LGNGTYATVYKGLNKTTGVYVAL
type: BINDING_SITE
name: Protein_kinase_ATP_BS
description: Protein kinase, ATP binding site
Protein sequence:
MAKGVVFNGLGRVRKFFGKNPEIIDIPDLIEVQKASYDHFLMMNIAPDERPNEGLQAAFKSVFPITAFSGAAMLEFVSYEFDPPKFDVDDCLWRDLTYAVPLKITLRLIVFDVDEFTGAKSIKDIKEQSIYMGDLPLMTKDGTFVIKGTQRIVVSQLHRSPGIHFDHDKGRASLSGKL

Annotated regions:
phrase: LIEVQKASYDHFLMMNIAPDERPNEGLQAAFKSVFPITAFSGAAMLEFVSYEFDPPKFDVDDCLWRDLTYAVPLKITLRLIVFDVDEFTGAKSIKDIKEQSIYMGDLPLMTKDGTFVIKGTQRIVVSQL
type: DOMAIN
name: RNA_pol_bsu_protrusion
description: RNA polymerase, beta subunit, protrusion
Protein sequence:
MAHTVEEAIADLKEGRMVIVVDAHDRENEGDIVCLADKVTPEIINFMVTHGRGLVCMSISKERAEELELAPMVLKNTERHATAFTVSVDYDEVTTGISAAERAATIQALCDPTKKSFHFRRPGHIFPLIANTEGVLGRAGHTEAALDLARLAGGTPAGVICEVLKEDGSMARLPELKEFSQKHQMKMISIQDLIQYRRTVEPLVERVVSIQLPTDFGDFKMVGYSNTMDQKEHVAIVKGDINPDEPILVRIHSECLTGDVFGSRRCDCGPQLHAALEQIEEAGSGIILYMRQEGRGIGLLNKLLAYKLQEEGYDTVEANLRLGFADDLRTYDLCAQMLKDLQATKIKLITNNPRKIKGLDEHGIEIVETVPIQLPTGEHNKHYMETKKEKLGHLLHL

Annotated regions:
phrase: ERVVSIQLPTDFGDFKMVGYSNTMDQKEHVAIVKGDINPDEPILVRIHSECLTGDVFGSRRCDCGPQLHAALEQIEEAGSGIILYMRQEGRGIGLLNKLLAYKLQEEGYDTVEANLRLGFADDLRTYDLCAQMLKDLQATKIKLITNNPRKIKGLDEHGIEIVETV
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MTTLLNPYFGEFGGMYVPQILMPALRQLEEAFVSAQKDPEFQAQFNDLLKNYAGRPTALTKCQNITAGTNTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGKTEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHSGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQILEREGRLPDAVIACVGGGSNAIGMFADFINETNVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFGMKAPMMQTEDGQIEESYSISAGLDFPSVGPQHAYLNSTGRADYVSITDDEALEAFKTLCLHEGIIPALESSHALAHALKMMRENPEKEQLLVVNLSGRGDKDIFTVHDILKARGEI

Annotated regions:
phrase: LLHGGAHKTNQVLG
type: CONSERVED_SITE
name: Trp_synth_b_CS
description: Tryptophan synthase, beta chain, conserved site

phrase: AGRPTALTKCQNITAGTNTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGKTEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHSGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQILEREGRLPDAVIACVGGGSNAIGMFADFINETNVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFGMKAPMMQTEDGQIEESYSISAGLDFPSVGPQHAYLNSTGRADYVSITDDEALEAFKTLCLHEGIIPALESSHALAHALKMMRENPEKEQLLV
type: DOMAIN
name: TrpB-like_PALP
description: Tryptophan synthase beta chain-like, PALP domain
Protein sequence:
MNTNNLLLENKKAKFNYFIEEKISCGIVLKGTEVKSIKAKKLSFNNSFASIKKEELWLENLHVSKYKEGNIFNHDELRPRKLLIKKRELQRLKKFKEKEGYTLIPISFYLKKSIIKVEVGICKGKKLYDKREILKQKSIKKDLSREIKYK

Annotated regions:
phrase: CGIVLKGTEVKS
type: CONSERVED_SITE
name: SsrA-bd_prot_CS
description: SsrA-binding protein, conserved site