nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MPEGKIIKALSGFYYVLDESQDKIIQCRGRGIFRKNKITPLVGDYAVYQAENDKEGYLLEIKERTNELIRPPISNVDQAVLVFSAVQPAFSTSLLDRFLVLVEANGIHPIICITKMDLAADGESKEAILSYVKDYQAIGYDVYVTSSKENSGLTGIVKHFENKTTVFAGQSGVGKSSLLNAISPELELKTNEISTHLGRGKHTTRHVELIHTSGGLVADTPGFSSLEFTGIEEEELGSTFPEIREISASCKFRGCLHLKEPKCAVKQAVEEGEIQPYRYEHYKEFMQEIKERKPRY

Annotated regions:
phrase: PEGKIIKALSGFYYVLDESQDKIIQCRGRGIFRKNKITPLVGDYAVYQAENDKEGYLLEIKERTNELI
type: DOMAIN
name: RsgA_N
description: Ribosome biogenesis GTPase RsgA, N-terminal

phrase: SNVDQAVLVFSAVQPAFSTSLLDRFLVLVEANGIHPIICITKMDLAADGESKEAILSYVKDYQAIGYDVYVTSSKENSGLTGIVKHFENKTTVFAGQSGVGKSSLLNAISPELELKTNEISTHLGRGKHTTRHVELIHTSGGLVADTPGF
type: DOMAIN
name: RsgA_GTPase_dom
description: RsgA GTPase domain

phrase: TNELIRPPISNVDQAVLVFSAVQPAFSTSLLDRFLVLVEANGIHPIICITKMDLAADGESKEAILSYVKDYQAIGYDVYVTSSKENSGLTGIVKHFENKTTVFAGQSGVGKSSLLNAISPELELKTNEISTHLGRGKHTTRHVELIHTSGGLVADTPGFSS
type: DOMAIN
name: G_CP_dom
description: Circularly permuted (CP)-type guanine nucleotide-binding (G) domain

phrase: EGKIIKALSGFYYVLDESQDKIIQCRGRGIFRKNKITPLVGDYAVYQAENDKEGY
type: DOMAIN
name: RsgA_N
description: Ribosome biogenesis GTPase RsgA, N-terminal

phrase: IKERTNELIRPPISNVDQAVLVFSAVQPAFSTSLLDRFLVLVEANGIHPIICITKMDLAADGESKEAILSYVKDYQAIGYDVYVTSSKENSGLTGIVKHFENKTTVFAGQSGVGKSSLLNAISPELELKTNEISTHLGRGKHTTRHVELIHTSGGLVADTPGFSSLE
type: DOMAIN
name: RsgA_GTPase_dom
description: RsgA GTPase domain
Protein sequence:
MTGVAVPHRAELARQLIDARNRTLRLVDFDDAELRRQYDPLMSPLVWDLAHIGQQEELWLLRGGDPRRPGLLEPAVEQLYDAFVHPRASRVHLPLLSPAQARRFCATVRSAVLDALDRLPEDADTFAFGMVVSHEHQHDETMLQALNLRSGEPLLGSGTALPPGRPGVAGTSVLVPGGPFVLGVDLADEPYALDNERPAHVVDVPAFRIGRVPVTNAEWRAFIDDGGYRQRRWWSDAGWAYRCEAGLTAPQFWNPDGTRTRFGHVEDIPPDEPVQHVTYFEAEAYAAWAGARLPTEIEWEKACAWDPATGRRRRYPWGDAAPTAALANLGGDALRPAPVGAYPAGASACGAEQMLGDVWEWTSSPLRPWPGFTPMIYQRYSQPFFEGAGSGDYRVLRGGSWAVAADILRPSFRNWDHPIRRQIFAGVRLAWDVDRQTARPGPVGGC

Annotated regions:
phrase: QLIDARNRTLRLVDFDDAELRRQYDPLMSPLVWDLAHIGQQEELWLLRGGDPRRPGLLEPAVEQLYDAFVHPRASRVHLPLLSPAQARRFCATVRSAVLDALDRLPEDADTFAFGMVVSHEHQHDET
type: DOMAIN
name: DinB-like
description: DinB-like domain

phrase: TSVLVPGGPFVLGVDLADEPYALDNERPAHVVDVPAFRIGRVPVTNAEWRAFIDDGGYRQRRWWSDAGWAYRCEAGLTAPQFWNPDGTRTRFGHVEDIPPDEPVQHVTYFEAEAYAAWAGARLPTEIEWEKACAWDPATGRRRRYPWGDAAPTAALANLGGDALRPAPVGAYPAGASACGAEQMLGDVWEWTSSPLRPWPGFTPMIYQRYSQPFFEGAGSGDYRVLRGGSWAVAADILRPSFRNWDHPIRRQIFAGVRLA
type: DOMAIN
name: SUMF_dom
description: Sulfatase-modifying factor enzyme-like domain
Protein sequence:
MKLKGEVALVTGGGAGLGRAIVDRYVAEGARVAVLDKSAAGLEEIRKRHGDAVVGIEGDVRSLDSHREAVARCVETFGKLDCLIGNAGVWDYQTQLADIPDNGISEAFDEMFAIIVKGYILAAKAALPALYKSKGSAIFTVSNAGFYPGGGGVLYTAGKHAVIGLVKQLAHEWGPRIRVNGIAPGGILGSDIRGLKTLGLQDQTIATMPLADMLGPVLPTGRVATAEEYAGAYVFFATRADTVPLTGSVLNIDGGMGVRGLFEASLGAQLDKHFA

Annotated regions:
phrase: SNAGFYPGGGGVLYTAGKHAVIGLVKQL
type: CONSERVED_SITE
name: Sc_DH/Rdtase_CS
description: Short-chain dehydrogenase/reductase, conserved site
Protein sequence:
MKLEMICTGEEVLAGQIVDTNAAWFASTMMEHGVEIQRRVTVGDRLEDLIAVFQERSLHADVILVNGGLGPTSDDMSALAMAKAKGEALVENAEWRERLEDWFTRNNREMPLSNLKQAMLPESAVMVDNPVGTACGFRVKLNRAWLFFTPGVPFELKHMVTEQFVPFIRDEFNLDSKVALKKLLTIGQGESALADKLEPLELPEGITIGYRSSMPHIEIKIFARGEKAIAVLPRVAGHIKMVLGTAVVAEDKATLAEEIHYKLLNSGLTLSVAESCTGGMITSQLVDFPGSSSYLQHGLVTYSNESKVRVLGVNPSTLDDHGAVSIATVEEMAKGARQILDSDYALATSGIAGPDGGTDEKPVGTVAIALATRGGVYSQMIKLPRRSRDLVRSLSAAVAYDMLRRELLAEAVIVDYQSIGRFSK

Annotated regions:
phrase: MICTGEEVLAGQIVDTNAAWFASTMMEHGVEIQRRVTVGDRLEDLIAVFQERSLHADVILVNGGLGPTSDDMSALAMAKAKGEALVENAEWRERLEDWFTRNNREMPLSNLKQAMLPESAVMVDNPVGTACGFRVKLNRAWLFFTPGVPFELKHMVTEQFVPFI
type: DOMAIN
name: MoaB/Mog_dom
description: MoaB/Mog domain

phrase: ATLAEEIHYKLLNSGLTLSVAESCTGGMITSQLVDFPGSSSYLQHGLVTYSNESKVRVLGVNPSTLDDHGAVSIATVEEMAKGARQILDSDYALATSGIAGPDGGTDEKPVGTVAIALATRGGVYSQMIKLPRRSRDLVRSLSAAVAYDMLRR
type: DOMAIN
name: CinA_C
description: CinA, C-terminal

phrase: EMICTGEEVLAGQIVDTNAAWFASTMMEHGVEIQRRVTVGDRLEDLIAVFQERSLHADVILVNGGLGPTSDDMSALAMAKAKGEALVENAEWRERLEDWFTRNNREMPLSNLKQAMLPESAVMVDNPVGTACGFRVKLNRAWLFFTPGVPFELKHMVTEQFVPFIRD
type: DOMAIN
name: MoaB/Mog_dom
description: MoaB/Mog domain

phrase: MKLEMICTGEEVLAGQIVDTNAAWFASTMMEHGVEIQRRVTVGDRLEDLIAVFQERSLHADVILVNGGLGPTSDDMSALAMAKAKGEALVENAEWRERLEDWFTRNNREMPLSNLKQAMLPESAVMVDNPVGTACGFRVKLNRAWLFFTPGVPFELKHMV
type: DOMAIN
name: MoaB/Mog_dom
description: MoaB/Mog domain

phrase: KLLNSGLTLSVAESCTGGMITSQLVDFPGSSSYLQHGLVTYSNESKVRVLGVNPSTLDDHGAVSIATVEEMAKGARQILDSDYALATSGIAGPDGGTDEKPVGTVAIALATRGGVYSQMIKLPRRSRDLVRSLSAAVAYDMLRRE
type: DOMAIN
name: CinA_C
description: CinA, C-terminal

phrase: EMICTGEEVLAGQIVDTNAAWFASTMMEHGVEIQRRVTVGDRLEDLIAVFQERSLHADVILVNGGLGPTSDDMSALAMAKAKGEALVENAEWRERLEDWFTRNNREMPLSNLKQAMLPESAVMVDNPVGTACGFRVKLNRAWLFFTPGVPFELKHMVTEQFVPFIR
type: DOMAIN
name: MoaB/Mog_dom
description: MoaB/Mog domain
Protein sequence:
MFNISPANHEFDDEIQSKIDNKTKPLGALGELENLAKQLALVLGKDKPEIINPKLLVFAADHGIASSGVSIAPSEVTTQMVMNFVAGGAAINVFCRQVGLDMEVIDCGILQPLEGVEGVIDQRLGAGTGAIHKQAAMTLGAVKQGLEMARTRIELHHQQGCNLIALGEMGIGNTSSAAAIMATVMGMKGVDCVGRGTGIDAATLKRKQMLVEQALHIHEAELTDPYNILACLGGFEIVQMTGAMLAAAERNMLVIVDGFIATAAAMVAVQINANVRDYMIFGHQSDERGHCLMMEHLQARPLLRLGMRLGEGSGAVLALPLIRAAAGFYNEMASFSDAGIEI

Annotated regions:
Protein sequence:
MNTQQLAKLRSIVPEMRRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNPVTQQLMNLGATIYFNHRPENVRDASVVVVSSAISADNPEIVAAHEARIPVIRRAEMLAELMRFRHGIAIAGTHGKTTTTAMVSSIYAEAGLDPTFVNGGLVKAAGVHARLGHGRYLIAEADESDASFLHLQPMVAIVTNIEADHMDTYQGDFENLKQTFINFLHNLPFYGRAVMCVDDPVIRELLPRVGRQTTTYGFSEDADVRVEDYQQIGPQGHFTLLRQDKEPMRVTLNAPGRHNALNAAAAVAVATEEGIDDEAILRALESFQGTGRRFDFLGEFPLEPVNGKSGTAMLVDDYGHHPTEVDATIKAARAGWPDKNLVMLFQPHRFTRTRDLYDDFANVLTQVDTLLMLEVYPAGEAPIPGADSRSLCRTIRGRGKIDPILVPDPAQVAEMLAPVLIGNDLILVQGAGNIGKIARSLAEIKLKPQTPEEEQHD

Annotated regions:
phrase: HIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNPVTQQLMNLGATIYFNHRPENVRDASVVVVSSAISADNPEIVAAHEARIPVIRRAEMLAELMRF
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: IAGTHGKTTTTAMVSSIYAEAGLDPTFVNGGLVKAAGVHARLGHGRYLIAEADESDASFLHLQPMVAIVTNIEADHMDTYQGDFENLKQTFINFLHNLPFYGRAVMCVDDPVIRELLPRVGRQTTTYGFSEDADVRVEDYQQIGPQGHFTLLRQDKEPMRVTLNAPGRHNALNAAAAVAV
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: EPVNGKSGTAMLVDDYGHHPTEVDATIKAARAGWPDKNLVMLFQPHRFTRTRDLYDDFANVLTQVDTLLMLEVYPAGEAPIPGADSRSLCRTIRGRGKIDPILVPDPAQVAEMLAPVLIGNDLILVQGA
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MSTIDNLDAHTPMMQQYLKLKAQHPDILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGIPHHAVENYLAKLVNQGESVAICEQIGDPATTKGPVERKVVRIVTPGTISDEALLQERQDNLLAAIWQDSKGFGYATLDISSGRFRLSEPADRETMAAELQRTNPAELLYAEDFAESSLIEGRRGLRRRPLWEFEIDTARQQLNLQFGTRDLVGFGVENAPRGLCAAGCLLQYVKDTQRTSLPHIRSITMERQQDSIIMDAATRRNLEITQNLAGGTDNTLASVLDCTVTPMGSRMLKRWLHMPVRDTAVLVERQQTIGALQERYTELQPVLRQVGDLERILARLALRTARPRDLARMRHALQQLPLLRELLADVDRQPVQKLREKMGEFTELRELLERSVIDAPPVLVRDGGVIAPGYSEELDEWRALADGATDYLDKLEIRERERLGLDTLKVGYNAVHGYYIQISRGQSHLAPIHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYDELFDLLLPHLADLQTSASALAELDVLVNLAERAETLNYCCPTFSDKPGIRISEGRHPVVEQVLKEPFIANPLQLAPQRRMLIITGPNMGGKSTYMRQTALIALLAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLVLMDEIGRGTSTYDGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRARQKLRELESISPNAAATQVDGTQMSLLAAPEETSPAVEALENLDPDSLTPRQALEWIYRLKSLV

Annotated regions:
phrase: GYSEELDEWRALADGATDYLDKLEIRERERLGLDTLKVGYNAVHGYYIQISRGQSHLAPIHYVRRQTLKNAERYIIPELKEYEDKVLTS
type: DOMAIN
name: DNA_mismatch_repair_MutS_clamp
description: DNA mismatch repair protein MutS, clamp

phrase: LIITGPNMGGKSTYMRQTALIALLAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLVLMDEIGRGTSTYDGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRARQKLREL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: TPMMQQYLKLKAQHPDILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGEPIPMAGIPHHAVENYLAKLVNQGESVAICEQIGDPATTKGPVERKVVRIVTPGTISD
type: DOMAIN
name: DNA_mismatch_repair_MutS-lik_N
description: DNA mismatch repair protein MutS-like, N-terminal

phrase: SLVLMDEIGRGTSTYD
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: RRMLIITGPNMGGKSTYMRQTALIALLAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLVLMDEIGRGTSTYDGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRARQKL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: GTDNTLASVLDCTVTPMGSRMLKRWLHMPVRDTAVLVERQQTIGALQERYTELQPVLRQVGDLERILARLALRTARPRDLARMRHALQQLPLLRELLADVDRQPVQKLREKMGEFTELRELLERSVIDAPPVLVRDGGVIAPGYSEELDEWRALADGATDYLDKLEIRERERLGLDTLKVGYNAVHGYYIQISRGQSHLAPIHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYDELFDLLLPHLADLQTSASALAELDVLVNLAERAETLNYCCPTFSDKPGIRISEGRHPVVEQ
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: ATRRNLEITQNLAGGTDNTLASVLDCTVTPMGSRMLKRWLHMPVRDTAVLVERQQTIGALQERYTELQPVLRQVGDLERILARLALRTARPRDLARMRHALQQLPLLRELLADVDRQPVQKLREKMGEFTELRELLERSVIDAPPVLVRDGGVIAPGYSEELDEWRALADGATDYLDKLEIRERERLGLDTLKVGYNAVHGYYIQISRGQSHLAPIHYVRRQTLKNAERYIIPELKEYEDKVLTSKGKALALEKQLYDELFDLLLPHLADLQTSASALAELDVLVNL
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: NLLAAIWQDSKGFGYATLDISSGRFRLSEPADRETMAAELQRTNPAELLYAEDFAESSLIEGRRGLRRRPLWEFEIDTARQQLNLQFGTRDLVGFGVENAPRGLCAAGCLLQYVKDTQRTSLPHI
type: DOMAIN
name: DNA_mmatch_repair_MutS_con_dom
description: DNA mismatch repair protein MutS, connector domain
Protein sequence:
MNTRFLDACWGKPVDTVPVWLMRQAGRYLPDYMRVRSKCTFLELCKTPELATEVTVQPVDILGVDAAILFSDILTPIEPMGMELDFTPGPVFAKPIRTMADVEALKIPKMETDVPYVLDAVKLLRKELAAKVPLIGFGGAPFTLACYMVEGKGSKDFAALKKMMYADPEVYAALMEKITTMDMEYLNAQIKAGAQAIQIFDTWGGMLSPADYERYVLPYTQRLINGLDRTNIPVIHFVKGAGTMLEIVKQAGGDVMGLDWHVNLGKARDILGDMAVQGNLDPTVLFAPNEIIEREVKRVLDENAGRPGLIFNLGHGILPTVPPEKAIFMVDCVHRLSRK

Annotated regions:
phrase: PVWLMRQAG
type: DOMAIN
name: Uroporphyrinogen_deCOase
description: Uroporphyrinogen decarboxylase (URO-D)

phrase: IGFGGAPFTLACYMVE
type: DOMAIN
name: Uroporphyrinogen_deCOase
description: Uroporphyrinogen decarboxylase (URO-D)

phrase: NTRFLDACWGKPVDTVPVWLMRQAGRYLPDYMRVRSKCTFLELCKTPELATEVTVQPVDILGVDAAILFSDILTPIEPMGMELDFTPGPVFAKPIRTMADVEALKIPKMETDVPYVLDAVKLLRKELAAKVPLIGFGGAPFTLACYMVEGKGSKDFAALKKMMYADPEVYAALMEKITTMDMEYLNAQIKAGAQAIQIFDTWGGMLSPADYERYVLPYTQRLINGLDRTNIPVIHFVKGAGTMLEIVKQAGGDVMGLDWHVNLGKARDILGDMAVQGNLDPTVLFAPNEIIEREVKRVLDENAGRPGLIFNLGHGILPTVPPEKAIFMVDCVH
type: DOMAIN
name: Uroporphyrinogen_deCOase
description: Uroporphyrinogen decarboxylase (URO-D)
Protein sequence:
MEPKYINTQSFVDSSFFVKLSQLKLDVLKLDQSSRPIHGYYNYKRLAPGQAPAINLNDISFASGQELESQLPARSAFIVSGEITNVNTLEEFKSQSKLEFLTRAGGKIIDSIKNKAALQDPSLLAHFAVFSFADLKKYKFYYWFAFPTLHSEWHITSEGPLGGDAPDSQFSLIRDGKPVPLAQLNAVPTHSPLHVAFVDTSAVPDAYSYVLRNFLTMLAIYGYRDVVVDVHRDNQSSSRQIALKLQSAVDSPKISGWERTSQGKLGPKLADLGALIDPSQLADQAIDLNLKLMKWRIVPTLDLDRIKATKCLLLGSGTLGSYVGRALLAWGVRKITFVDNGKVSFSNPVRQPLFNFIDCLDGGSPKAETAAENMKRIFPLVDAQGFTLEVPMAGHPITDETKQKLDFDRLGELVQNHDVIFLLMDSRETRWLPTVMGNVNNKLVINAALGFESYLVMRHGCINPEKLPEEQQESRLGCYFCNDVYAPSDSTTDRTLDQMCTVTRPGVALMAASLAVELMVSVLQHPDRQYAPHSAQDSCTVLGSLPHQLRGFLHNFEMLKLSAKNFRYCSACSVSVVQEFKSRGWEFVKQALENPKYLEQLTGLTQVHQQAEEAELNFDISDSEGEFD

Annotated regions:
phrase: MKWRIVPTLDLDRIKATKCLLLGSGTLGSYVGRALLAWGVRKITFVDNGKVSFSNPVRQPLFNFIDCLDGGSPKAETAAENMKRIFPLVDAQGFTLEVPMAGHPITDETKQKLDFDRLGELVQNHDVIFLLMDSRETRWLPTVMGNVNNKLVINAALGFESYLVMRHGCINPEKLPEEQQESRLGCYFCNDVYAPSDSTTDRTLDQMCTVTRPGVALMAASLAVELMVSVLQHPDRQYA
type: DOMAIN
name: ThiF_NAD_FAD-bd
description: THIF-type NAD/FAD binding fold

phrase: KYINTQSFVDSSFFVKLSQLKLDVLKLDQSSRPIHGYYNYKRLAPGQAPAINLNDISFASGQELESQLPARSAFIVSGEITNVNTLEEFKSQSKLEFLTRAGGKIIDSIKNKAALQDPSLLAHFAVFSFADLKKYKFYYWFAFPTLHSEWHITSEGPLGGDAPDSQFSLIRDGKPVPLAQLNAVPTHSPLHVAFVDTSAVPDAYSYVLRNFLTMLAIYGYRDVVVDVHRDNQSSSRQIALKLQSAVDSPKISGWERTSQGKLGPKLADLGA
type: DOMAIN
name: Atg7_N
description: Ubiquitin-like modifier-activating enzyme Atg7, N-terminal
Protein sequence:
MIQRQTYLNVADNSGAKKVQVIGIPYAPRKYATLRDVVTVTVKEALPQGNAKKGKIYRAIIVRTAKEVRRPDGSYIKFDDNACVLLNQYGEPLGTRVLGPIAREVRNKGFTKIASLAPEVV

Annotated regions:
phrase: AIIVRTAKEVRRPDGSYIKFDDNACV
type: CONSERVED_SITE
name: Ribosomal_uL14_CS
description: Large ribosomal subunit protein uL14, conserved site
Protein sequence:
MKEAYLYIVEKSVAWEFDSPEYGRLARKVVELLYERKEDLSDDRVAIFLNISTAETRRILQYLMKQNMVGVKKRTTEDYRIEYTWYVDDEIIRQAIKNRAKVAKEKISSLIRSLTEGAYYICPTCHMRYTLDEAINYGGVCPVCGTQLEYVENTEEINKLTKVYEEVDKI

Annotated regions:
phrase: RKVVELLYERKEDLSDDRVAIFLNISTAETRRILQYLMKQNMVGVKKRTTEDYRIEYTWYVDDEIIRQAIKNRAKVAKEKISSLIRSLTEGAYYICPTCHMRYTLDEAINYGGVCPVCGTQLEYVENTEEINKLT
type: DOMAIN
name: TFIIE_asu
description: Transcription initiation factor IIE subunit alpha, N-terminal

phrase: YGRLARKVVELLYERKEDLSDDRVAIFLNISTAETRRILQYLMKQNMVGVKKRTTEDYRIEYTWYVDDEIIRQAIKNRAKVAKEK
type: DOMAIN
name: TFIIEa/SarR/Rpc3_HTH_dom
description: TFIIEalpha/SarR/Rpc3 HTH domain

phrase: MKEAYLYIVEKSVAWEFDSPEYGRLARKVVELLYERKEDLSDDRVAIFLNISTAETRRILQYLMKQNMVGVKKRTTEDYRIEYTWYVDDEII
type: DOMAIN
name: TFIIE/TFIIEa_HTH
description: Transcription factor TFE/TFIIEalpha HTH domain
Protein sequence:
MATSAAFLKGDFKRTGKMELSDEQKSQMWINSVNSENKEALLAWVKETGIELVQINGQRKYGGPPPGWIGNAPVSGSEVFIGKIPQDIYEDKLIPLFQSVGKLYEFRLMMTFSGLNRGFAYARYISRRQAISAIMSLNGFEITKGCCIVVCRSTEKSELALDGLPGNFDENMLKNVLDEVTSGVSSISLHPSPTKESQVLAVVKYDSHRAAAMAKKTLCEGSPILPGLPLTVNWLKTDMRQKLRSTDKLQQTKDLSPLPLLYTDRPDLPKETLLSAVGCLNMLCQEMKLGRPVFLIKLFSVTSFGWIRFWYQVVIPTYPTPFCGYAWMIGENLELNEKYEHARQVVAMKILSALGYIPDFSLGDVTARNAL

Annotated regions:
phrase: ELALDGLPGNFDENMLKNVLDEVTSGVSSISLHPSPTKESQVLAVVKYDSHRAAAMAKKTLCEGSPILPGLPLTV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: EVFIGKIPQDIYEDKLIPLFQSVGKLYEFRLMMTFSGLNRGFAYARYISRRQAISAIMSLNGFEITKGCCIVV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: SEVFIGKIPQDIYEDKLIPLFQSVGKLYEFRLMMTFSGLNRGFAYARYISRRQAISAIMSLNGFEITKGCCIVVCRST
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: GSEVFIGKIPQDIYEDKLIPLFQSVGKLYEFRLMMTFSGLNRGFAYARYISRRQAISAIMSLNGFEITKGCCIVVCR
type: DOMAIN
name: DND1_RRM1
description: Dead end protein 1, RNA recognition motif 1

phrase: VFIGKIPQDIYEDKLIPLFQSVGKLYEFRLMMTFSGLNRGFAYARYISRRQAISAIMSLNGFEI
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: SAVGCLNMLCQEMKLGRPVFLIKLFSVTSFGWIRFWYQVVIPTYPTPFCGYAWMIGENLELNEKYEHARQVVAMKILSAL
type: DOMAIN
name: DND1_DSRM
description: DND1, double-stranded RNA binding domain
Protein sequence:
MSLFITFEGGEGCGKSTQSKALYRYLKKKGLGCVLTHEPGGSKSGDKITRLLKWSKEEHISPLTELLLFNASRSILIDNVIKPALQDGKIVICDRYTDSTLAYQGYGRGLDLDTVKCVNSLASGGLVPDLTIWLDMDDKAALLRKGELPPDRFESENNGFHQRVRNGFGAIYATEPDRFLKLDASLPQSEIFSRIKQRVTILLGCRNE

Annotated regions:
phrase: FEGGEGCGKSTQSKALYRYLKKKGLGCVLTHEPGGSKSGDKITRLLKWSKEEHISPLTELLLFNASRSILIDNVIKPALQDGKIVICDRYTDSTLAYQGYGRGLDLDTVKCVNSLASGGLVPDLTIWLDMDDKAALLRKGELPPDRFESENNGFHQRVRNGFGAIYATEPDRFLKLDASLPQSEIFSR
type: DOMAIN
name: Thymidylate_kin-like_dom
description: Thymidylate kinase-like domain

phrase: ICDRYTDSTLAY
type: CONSERVED_SITE
name: Thymidylate_kin_CS
description: Thymidylate kinase, conserved site
Protein sequence:
MSGFWESCLQRFEQELPAQQFNTWIKPLRLEGESTALEDGLRLIAPNGFILKWVRDRYLTRIEDYSRTFFEGPVTIALVIGSGKATAARIQATTTDSGQNAPANPATTSEKRTAASEKARGKGSNYEKSRLFPSFTFDNLVVGKANDLARAAAVQVANNPGGAYNPLFIYGGAGLGKTHLIHAIGNTIATENPEKIVRYVHAEDYYSDVVRAYQQKSFDSFKRTYRSLDVLLLDDVQFFNGKNRSQEEFFFLFNALIEARKQIIITCDTYPKDINGLDDRLVTRFDWGLTVQIEPPELEMRVAILKKKAEAEGIQLDDEVAFFIAKHLRSNVRELEGALKKVLAYSSFHGRVIALDLAKEALKDVIGSVRNVGMDNIQKTVADYYKIKVAELFSKKRTRAIARPRQVAMWLCREVTSHSFPEIGDAFGGRDHTTVIHAVKTIDSLRIKENELNHDLHVLLQVLKG

Annotated regions:
phrase: PSFTFDNLVVGKANDLARAAAVQVANNPGGAYNPLFIYGGAGLGKTHLIHAIGNTIATENPEKIVRYVHAEDYYSDVVRAYQQKSFDSFKRTYRSLDVLLLDDVQFFNGKNRSQEEFFFLFNALIEARKQIIITCDTYPKDINGLDDRLVTRFDWGLT
type: DOMAIN
name: DnaA_dom
description: Chromosomal replication initiator protein DnaA, ATPAse domain

phrase: AYNPLFIYGGAGLGKTHLIHAIGNTIATENPEKIVRYVHAEDYYSDVVRAYQQKSFDSFKRTYRSLDVLLLDDVQFFNGKNRSQEEFFFLFNALIEARKQIIITCDTYPKDINGLDDRLVTRFDWGLTVQI
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: MDNIQKTVADYYKIKVAELFSKKRTRAIARPRQVAMWLCREVTSHSFPEIGDAFGGRDHTTVIHAVKTIDSLRIKENELNHDLHVLLQV
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: IGDAFGGRDHTTVIHAVKT
type: CONSERVED_SITE
name: Chromosome_initiator_DnaA_CS
description: Chromosomal replication control, initiator DnaA, conserved site

phrase: GMDNIQKTVADYYKIKVAELFSKKRTRAIARPRQVAMWLCREVTSHSFPEIGDAFGGRDHTTVIHAVKT
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: FWESCLQRFEQELPAQQFNTWIKPLRLEGESTALEDGLRLIAPNGFILKWVRDRYLTRIED
type: DOMAIN
name: DnaA_N_dom
description: DnaA N-terminal domain

phrase: DNIQKTVADYYKIKVAELFSKKRTRAIARPRQVAMWLCREVTSHSFPEIGDAFGGRDHTTVIHAVKT
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal
Protein sequence:
MSSTSLPSSGKPLKLRINRDSEGYLSLVTESGEIYRCPICGNDRFVYNYERGEVVCIVCGAVVQEQLLDLGPEWRAFTSEEKGQRARTGAPLTRLISEALTTVIDWRDKDVSGRELDIKRKLEVIRLRKWQTRARVQTSYERNFIQAAQELERLKSSMGVPRPCVEQALEIYRQALEKELVRGRSVEAMAAAALYMACRMMRMPRPLDELVRYTKASRREVARCYRLLLRELNVKVPISDPVLYISRIAEQLKLSGEVVKAAIDILQRAKKAGITAGKDPAGLAAAAVYIASLMHGDNRTQKDFAVAAGVTEVTVRNRYKELAKALNIKVPVK

Annotated regions:
phrase: EIYRCPICGNDRFVYNYERGEVVCIVCGAVV
type: DOMAIN
name: Znf_TFIIB
description: Zinc finger, TFIIB-type

phrase: VPISDPVLYISRIAEQLKLSGEVVKAAIDILQRAKKAGITAGKDPAGLAAAAVYIASLMHGDNRTQKDFAVAAGVTEVTVRNRYKELA
type: DOMAIN
name: TFIIB_cyclin
description: Transcription factor TFIIB, cyclin-like domain

phrase: RNFIQAAQELERLKSSMGVPRPCVEQALEIYRQALEKELVRGRSVEAMAAAALYMACRMMRMPRPLDELVRYTKASRREVARCYRLL
type: DOMAIN
name: TFIIB_cyclin
description: Transcription factor TFIIB, cyclin-like domain

phrase: NFIQAAQELERLKSSMGVPRPCVEQALEIYRQALEKELVRGRSVEAMAAAALYMACRMMRMPRPLDELVRYTKASRREVARCYRLLL
type: DOMAIN
name: Cyclin-like_dom
description: Cyclin-like domain

phrase: LYISRIAEQLKLSGEVVKAAIDILQRAKKAGITAGKDPAGLAAAAVYIASLMHGDNRTQKDFAVAAGVTEVTVRNRYKELA
type: DOMAIN
name: Cyclin-like_dom
description: Cyclin-like domain

phrase: YRCPICGNDRFVYNYERGEVVCIVCGAVVQEQLLDLGPEWRA
type: DOMAIN
name: Znf_TFIIB
description: Zinc finger, TFIIB-type

phrase: GKDPAGLAAAAVYIA
type: CONSERVED_SITE
name: TFIIB_CS
description: Transcription factor TFIIB, conserved site

phrase: GRSVEAMAAAALYMA
type: CONSERVED_SITE
name: TFIIB_CS
description: Transcription factor TFIIB, conserved site
Protein sequence:
MAVVYYLLLAGLIACSHALAAGTPALGDDRGRPWPASLAALALDGKLRTDSNATAAASTDFGNITSALPAAVLYPSSTGDLVALLSAANSTPGWPYTIAFRGRGHSLMGQAFAPGGVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARGVAPRSWNDYLYLTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGLGQFGVITRARIAVEPAPARARWVRFVYTDFAAFSADQERLTAPRPGGGGASFGPMSYVEGSVFVNQSLATDLANTGFFTDADVARIVALAGERNATTVYSIEATLNYDNATAAAAAVDQELASVLGTLSYVEGFAFQRDVAYAAFLDRVHGEEVALNKLGLWRVPHPWLNMFVPRSRIADFDRGVFKGILQGTDIVGPLIVYPLNKSMWDDGMSAATPSEDVFYAVSLLFSSVAPNDLARLQEQNRRILRFCDLAGIQYKTYLARHTDRSDWVRHFGAAKWNRFVEMKNKYDPKRLLSPGQDIFN

Annotated regions:
phrase: TSALPAAVLYPSSTGDLVALLSAANSTPGWPYTIAFRGRGHSLMGQAFAPGGVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARGVAPRSWNDYLYLTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTCSKQLNADLFDAVLGGLGQFGVITRARIAVEP
type: DOMAIN
name: FAD-bd_PCMH
description: FAD-binding domain, PCMH-type

phrase: PAAVLYPSSTGDLVALLSAANSTPGWPYTIAFRGRGHSLMGQAFAPGGVVVNMASLGDAAAPPRINVSADGRYVDAGGEQVWIDVLRASLARGVAPRSWNDYLYLTVGGTLSNAGISGQAFRHGPQISNVLEMDVITGHGEMVTC
type: DOMAIN
name: Oxid_FAD_bind_N
description: FAD linked oxidase, N-terminal

phrase: PARARWVRFVYTDFAAFSADQERLTAPRPGGGGASFGPMSYVEGSVFVNQSLATDLANTGFFTDADVARIVALAGERNATTVYSIEATLNYDNATAAAAAVDQELASVLGTLSYVEGFAFQRDVAYAAFLDRVHGEEVALNKLGLWRVPHPWLNMFVPRSRIADFDRGVFKGILQGTDIVGPLIVYPLNKSMWDDGMSAATPSEDVFYAVSLLFSSVAPNDLARLQEQNRRILRFCDLAGIQYKTYLARHTDRSDWVRHFGAAKWNRFVEMKNKYDPKRLLSPGQDI
type: DOMAIN
name: Cytokinin_DH_FAD/cytokin-bd
description: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain

phrase: PAAVLYPSSTGDLVALLSAANSTPGWPYTIAFRGRG
type: BINDING_SITE
name: Oxy_OxRdtase_FAD_BS
description: Oxygen oxidoreductase covalent FAD-binding site
Protein sequence:
MPELPEVETVRRGLQPAMEGFRIDRAVAHRENLRFPLQKDFAARLTGQTVTGLGRRAKYLLADLSSGDVLLMHLGMSGSFRVIGADGETTPGEFHYPRSEDRTHDHVVFEMASGARVVFNDPRRFGFMKVFPRSEIETEPHLKGLGPEPLGNAFDASLLAKACAGKQTSLKAALLDQRVVAGLGNIYVCEALFRAHLSPKRKASTLANRKEEPTDHAVRLTEAIREVLGEAIKAGGSSLRDHRQTSGELGYFQHAFKVYDREGKPCPTCGGTVQRFVQNGRSTFWCPKCQK

Annotated regions:
phrase: PELPEVETVRRGLQPAMEGFRIDRAVAHRENLRFPLQKDFAARLTGQTVTGLGRRAKYLLADLSSGDVLLMHLGMSGSFRVIGADGETTPGEFHYPRSEDRTHDHVVFEMASGARVVFNDPRRFGFM
type: DOMAIN
name: FPG_cat
description: Formamidopyrimidine-DNA glycosylase, catalytic domain

phrase: GKPCPTCGGTVQRFVQNGRSTFWCPKCQ
type: DOMAIN
name: Znf_FPG/IleRS
description: Zinc finger, FPG/IleRS-type

phrase: KVYDREGKPCPTCGGTVQRFVQNGRSTFWCPKCQ
type: DOMAIN
name: Znf_DNA_glyclase/AP_lyase
description: Zinc finger, DNA glycosylase/AP lyase-type

phrase: LGPEPLGNAFDASLLAKACAGKQTSLKAALLDQRVVAGLGNIYVCEALFRAHLSPKRKASTLANRKEEPTDHAVRLTEAIREVLGEAIKAGGSSLR
type: DOMAIN
name: DNA_glyclase/AP_lyase_DNA-bd
description: DNA glycosylase/AP lyase, H2TH DNA-binding

phrase: MPELPEVETVRRGLQPAMEGFRIDRAVAHRENLRFPLQKDFAARLTGQTVTGLGRRAKYLLADLSSGDVLLMHLGMSGSFRVIGADGETTPGEFHYPRSEDRTHDHVVFEMASGARVVFNDPRRFGF
type: DOMAIN
name: FPG_cat
description: Formamidopyrimidine-DNA glycosylase, catalytic domain

phrase: CPTCGGTVQRFVQNGRSTFWCPKC
type: BINDING_SITE
name: DNA_glyclase_Znf_dom_DNA_BS
description: DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site

phrase: LGPEPLGNAFDASLLAKACAGKQTSLKAALLDQRVVAGLGNIYVCEALFRAHLSPKRKASTLANRKEEPTDHAVRLTEAIREVLGEAIKAGGSSLRDH
type: DOMAIN
name: DNA_glyclase/AP_lyase_DNA-bd
description: DNA glycosylase/AP lyase, H2TH DNA-binding

phrase: PELPEVETVRRGLQPAMEGFRIDRAVAHRENLRFPLQKDFAARLTGQTVTGLGRRAKYLLADLSSGDVLLMHLGMSGSFRVIGADGETTPGEFHYPRSEDRTHDHVVFEMASGARVVFNDPRRF
type: DOMAIN
name: FPG_cat
description: Formamidopyrimidine-DNA glycosylase, catalytic domain
Protein sequence:
MPEPRGSSQLRVNAAFAARYNRYREREELQRLKDRYGDRDSSSDSSSESDSSDERVEFDPQQERDFYKTLSLLKKKDPRIYQKDATFYNRTASSSDSEEDPEALEKQKKVRPMYLKDYERKVILEKAGKYVDEENSDGETSNHRLQETSSQSYVEEQKQLKESFRAFVEDSEDEDGAGEGGSSLLQKRAKTRQEKAQEEADYIEWLKGQKEIRNPDSLKELTHLKEYWNDPELDEGERFLRDYILNKRYEEEEEEEEDEEEMEEEEGVHGPPVQLAVDDSSDEGELFLKKQEDFEQKYNFRFEEPDSASVKTYPRSIASSVRRKDERRKEKREETRERKKREKAKKQEELKQLKNLKRKEILAKLEKLRKVTGNEMLGLEEGDLEDDFDPAQHDQLMQKCFGDEYYGAVEEEKPQFEEEEGLEDDWNWDTWDGPEQEGDWSQQELHCEDPNFNMDADYDPSQPRKKKREAPLTGKKKRKSPFAAAVGQEKPVFEPGDKTFEEYLDEYYRLDYEDIIDDLPCRFKYRTVVPCDFGLSTEEILAADDKELNRWCSLKKTCMYRSEQEELRDKRAYSQKAQNSWKKRQVFKSLCREEAETPAEATGKPQRDEAGPQRQLPALDGSLMGPESPPAQEEEAPVSPHKKPAPQKRRRAKKARLLGPTVMLGGCEFSRQRLQAFGLNPKRLHFRQLGRQRRKQQGPKNSS

Annotated regions:
phrase: KTFEEYLDEYYRLDYEDIIDDLPCRFKYRTVVPCDFGLSTEEILAADDKELNRWCSLKKTCMYRSEQEELRDKRAYSQKAQNSWKKR
type: DOMAIN
name: Kri1-like_C
description: Kri1-like, C-terminal