nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSLFNKITKTFQWGQHTVTLETGEIARQSGGAVIVDMDGTVVLATVVAAKNPKPGQDFFPLTVDYIEKTYAAGKIPGSFFKREGRPSELETLTSRLIDRPLRPLFPEGFYNEVQVVVHVLSLNPEASADIAALIGSSAALAISGIPFNGPIGAARVGYINGEYVLNPGPTQLADSKLDLIVAGTEAAVLMVESEADQLPEDIMLGGVVFGHEQGNIAVRVINELVREAGKPEWQWTPPAKDEDFIAKVNGLGEAKLRAAYQIRSKQDRTQATRAAYAEVLAALAAEGAAVDKVKVENLLFDIEAKIVRSQILAGEPRIDGRDTRTVRPIEIRSSVLPRTHGSALFTRGETQALVITTLGTERDTQRIDALAGEFEDRFMFHYNMPPFATGETGRVGSPKRREIGHGRLAKRALIPVLPKKDEFAYAIRVVSEITESNGSSSMASVCGGCLSMMDAGVPLKAHVAGIAMGLIKDGNRFAVLTDILGDEDHLGDMDFKVAGTTTGVTALQMDIKIQGITKEIMQVALAQAKEARLHILGKMVEALGGAKEELSVFAPRLYVMKINPEKIRDVIGKGGATIRALTEETGTQINIEEDGTITIASTDGDKAQAAMKRIEEITAEAEIGKVYEGPVTKILDFGALVNILPGKDGLLHISQIAHQRVEKVTDFLTEGQIVKVKVLETDEKGRIKLSLKALLERPEGYVEEERPRREYGDRGDRGDRGRDRGDRPPRRERGDAPQAAPESDVPSPQAE

Annotated regions:
phrase: VAGIAMGLIKDGNRFAVLTDILGDEDHLGDMDFKVAGTTTGVTALQMDIKIQGITKEIMQVALAQAKE
type: DOMAIN
name: ExoRNase_PH_dom2
description: Exoribonuclease, phosphorolytic domain 2

phrase: GPIGAARVGYINGEYVLNPGPTQLADSKLDLIVAGTEAAVLMVESEADQLPEDIMLGGVVFGH
type: DOMAIN
name: ExoRNase_PH_dom2
description: Exoribonuclease, phosphorolytic domain 2

phrase: VMKINPEKIRDVIGKGGATIRALTEETGTQINIEEDGTITIASTDGDKAQAAMKRIE
type: DOMAIN
name: KH_dom_type_1
description: K Homology domain, type 1

phrase: GKVYEGPVTKILDFGALVNILPGKDGLLHISQIAHQRVEKVTDFLTEGQIVKVKVLETDEKGRIKLSL
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: AKVNGLGEAKLRAAYQIRSKQDRTQATRAAYAEVLAALAAEGAAVDKVKVENLLFDIEAKIVRSQILAGEPRIDGR
type: DOMAIN
name: PNPase_PH_RNA-bd_bac/org-type
description: Polyribonucleotide nucleotidyltransferase, RNA-binding domain

phrase: VRPIEIRSSVLPRTHGSALFTRGETQALVITTLGTERDTQRIDALAGEFEDRFMFHYNMPPFATGETGRVGSPKRREIGHGRLAKRALIPVLPKKDEFAYAIRVVSEITESNGSSSMASVCGGCLSMMDAGV
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1

phrase: TVTLETGEIARQSGGAVIVDMDGTVVLATVVAAKNPKPGQDFFPLTVDYIEKTYAAGKIPGSFFKREGRPSELETLTSRLIDRPLRPLFPEGFYNEVQVVVHVLSLNPEASADIAALIGSSAALAISGI
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1

phrase: EIGKVYEGPVTKILDFGALVNILPGKDGLLHISQIAHQRVEKVTDFLTEGQIVKVKVLETDEKGRIKLSL
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: AEIGKVYEGPVTKILDFGALVNILPGKDGLLHISQIAHQRVEKVTDFLTEGQIVKVKVLETDEKGRIKLSL
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: APRLYVMKINPEKIRDVIGKGGATIRALTEETGTQINIEEDGTITIASTDGDKAQAAMKRIEEIT
type: DOMAIN
name: KH_dom
description: K Homology domain
Protein sequence:
MTTLTARPEAITFDPQQSALIVVDMQNAYATPGGYLDLAGFDVSTTRPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQGKLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTSIATNVCVESTLRDGFFLEYFGVVLEDATHQAGPEFVQKAALFNIETFFGWVSDVETFCDALSPTSFARIA

Annotated regions:
phrase: SALIVVDMQNAYATPGGYLDLAGFDVSTTRPVIANIQTAVTAARAAGMLIIWFQNGWDEQYVEAGGPGSPNFHKSNALKTMRKQPQLQGKLLAKGSWDYQLVDELVPQPGDIVLPKPRYSGFFNTPLDSILRSRGIRHLVFTSIATNVCVESTLRDGFFLEYFGVVLEDATHQAGPEFVQKAALFNIETFFGWVSDV
type: DOMAIN
name: Isochorismatase-like_dom
description: Isochorismatase-like domain
Protein sequence:
MSDHNPLTLKLNLREKIAYGMGDVGSNLMLCIGTLYLLKFYTDELGMPAYYGGIIFLVAKFFTAFTDMLTGFLLDSRKNIGPKGKFRPFILYAAVPAALIATLQFIATTFCLPVKTTIATALFMMFGLSYSLMNCSYGAMIPAITKNPNERAQLAAYRQGGATIGLLICTVAFIPLQSLFSDSTVGYACAALMFSIGGFIFMMLCYRGVKEHYVDTTPTGHKASILKSFCAIFRNPPLLVLCIANLCTLAAFNIKLAIQVYYTQYVLNDINLLSWMGFFSMGCILIGVLLVPLTVKCFGKKQVYLAGMVLWAVGDILNYFWGSNSFTFVMFSCVAFFGTAFVNSLNWALVPDTVDYGEWKTGIRAEGSVYTGYTFFRKISAALAGFLPGIMLTQIGYVPNIAQSDATLQGLRQLIFIWPCALAIIAALTMGFFYTLNEKRFALIIEEINQRKNKEMATEEKTASVTL

Annotated regions:
phrase: DMLTGFLLDSRKNIGPKGKFRPFILYA
type: CONSERVED_SITE
name: Na/Gal_symport_CS
description: Sodium:galactoside symporter, conserved site

phrase: KIAYGMGDVGSNLMLCIGTLYLLKFYTDELGMPAYYGGIIFLVAKFFTAFTDMLTGFLLDSRKNIGPKGKFRPFILYAAVPAALIATLQFIATTFCLPVKTTIATALFMMFGLSYSLMNCSYGAMIPAITKNPNERAQLAAYRQGGATIGLLICTVAFIPLQSLFSDSTVGYACAALMFSIGGFIFMMLCYRGVKEHYVDTTPTGHKASILKSFCAIFRNPPLLVLCIANLCTLAAFNIKLAIQVYYTQYVLNDINLLSWMGFFSMGCILIGVLLVPLTVKCFGKKQVYLAGMVLWAVGDILNYFWGSNSFTFVMFSCVAFFGTAFVNSLNWALVPDTVDYGEWKTGIRAEGSVYTGYTFFRKISAALAGFLPGIMLTQIGYVPNIAQSDATLQGLRQLIFIWPCALAIIAALTMGFFYTLNEKRFALIIEEINQ
type: DOMAIN
name: Na/Gal_symport
description: Sodium:galactoside symporter
Protein sequence:
MRVAVGMSGGVDSSVTALLLKEQGHDVIRVTLRFHTVEACEVNETHNVCCSPKDVQDASRVAKRLGIPHLVFSWEEIFKSKVIDYFVEEYKRGRTPNPCALCNREVKTGFFARYLKQVADIDKLATGHYAKIEEDKKYGLVIKRPKDRKRDQTYFLSLVRREDLELLTFPLGAYTKEEVREIAKRYGLEVAQKRDSQEVCFLMGKSPGEYLEGILGKQRGLIKHVSGKVLGEHEGVYRYTIGQRRGLGISYGKPVYVIDIDAKTNTLIVGEEEYLYNDKLLVKEINFHVPLEKWENVSAQIRYRHKPVPVERIEKTEEGFLVKFKEDVRGITPGQVVAFYDGDVLLGGGIIEESVK

Annotated regions:
phrase: EYLEGILGKQRGLIKHVSGKVLGEHEGVYRYTIGQRRGLGISYGKPVYVIDIDAKTNTLIVG
type: DOMAIN
name: MnmA-like_central
description: tRNA-specific 2-thiouridylase MnmA-like, central domain

phrase: DKLLVKEINFHVPLEKWENVSAQIRYRHKPVPVERIEKTEEGFLVKFKEDVRGITPGQVVAFYDGDVLLGGGI
type: DOMAIN
name: MnmA-like_C
description: tRNA-specific 2-thiouridylase MnmA-like, C-terminal domain
Protein sequence:
MRFRFCGDLDCPDWVLAEISTLAKISSVKLRLLCSQVLKELLGQGIDYEKILKLTADAKFESGDVKATVAVLSFILSSAAKHSVDSDSLSSELQQLGLPKEHATSLCRCYEEKQSPLQEHLRACSLRVNRLASVGWRVDYTLSSSLLHSVEEPMVHLQLQVVPAPGTQAQPVSMSLSADKFQVLLAELKQAQTMMTALG

Annotated regions:
phrase: RLASVGWRVDYTLSSSLLHSVEEPMVHLQLQVVPAPGTQAQPVSMSLSADKFQVLLAELKQAQTMMTAL
type: DOMAIN
name: COMM
description: COMM domain

phrase: RVNRLASVGWRVDYTLSSSLLHSVEEPMVHLQLQVVPAPGTQAQPVSMSLSADKFQVLLAELKQ
type: DOMAIN
name: COMM
description: COMM domain
Protein sequence:
MYGNYSHFMKFPTGFGGSPGHTGSTSMSPSAALSTGKPMDSHPSYTDTPVSAPRTLSAVGTPLNALGSPYRVITSAMGPPSGALAAPPGINLVAPPSSQLNVVNSVSISEDIKPLPGLPGIGNMNYPSTSPGSLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDKRQRNRCQYCRYQKCLVMGMKREAVQEERQRSRERAESEAECANSGHEDMPVERILEAELAVEPKTESYGDMNTENSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLETPLQTT

Annotated regions:
phrase: CAICGDRSSGKHYGVYSCEGCKGFFK
type: DOMAIN
name: Znf_hrmn_rcpt
description: Zinc finger, nuclear hormone receptor-type

phrase: TSMSPSAALSTGKPMDSHPSYTDTPVSAPRTLSAVGTPLNALGSPYRVITSAMGPPSGALAAPPGINLVAPPSSQLNVVNSVSISEDIKPLPGLPGIGNMNYPSTSPGS
type: DOMAIN
name: Nuc_recep-AF1
description: Nuclear/hormone receptor activator site AF-1

phrase: KHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDKRQRNRCQYCRYQKCLVMGMKR
type: DOMAIN
name: Znf_hrmn_rcpt
description: Zinc finger, nuclear hormone receptor-type

phrase: HEDMPVERILEAELAVEPKTESYGDMNTENSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLET
type: DOMAIN
name: Nucl_hrmn_rcpt_lig-bd
description: Nuclear hormone receptor, ligand-binding domain

phrase: PVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFK
type: DOMAIN
name: Nucl_hrmn_rcpt_lig-bd
description: Nuclear hormone receptor, ligand-binding domain

phrase: CAICGDRSSGKHYGVY
type: DOMAIN
name: Znf_hrmn_rcpt
description: Zinc finger, nuclear hormone receptor-type

phrase: SCEGCKGFFKRTIRK
type: DOMAIN
name: Znf_hrmn_rcpt
description: Zinc finger, nuclear hormone receptor-type

phrase: RNRCQYCR
type: DOMAIN
name: Znf_hrmn_rcpt
description: Zinc finger, nuclear hormone receptor-type

phrase: YQKCLVMG
type: DOMAIN
name: Znf_hrmn_rcpt
description: Zinc finger, nuclear hormone receptor-type

phrase: HAADKQLFTLVEWAKRIPHFSDLTLEDQVILLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLLLRLPALRSI
type: DOMAIN
name: Nucl_hrmn_rcpt_lig-bd
description: Nuclear hormone receptor, ligand-binding domain

phrase: ICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDKRQRNRCQYCRYQKCLVMGMK
type: DOMAIN
name: Znf_hrmn_rcpt
description: Zinc finger, nuclear hormone receptor-type

phrase: KHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDKRQRNRCQYCRYQKCLVMGMKREAVQ
type: DOMAIN
name: Znf_hrmn_rcpt
description: Zinc finger, nuclear hormone receptor-type
Protein sequence:
MNERYELNKNLAQMLKGGVIMDVTTPEQAVIAEKAGAVAVMALERVPADIRARGGVARMSDPKIIKEIKAAVSIPVMAKVRIGHFVEAQILEALGIDFIDESEVLTPADEMYHIDKWAFKIPFVCGARNLGEALRRIGEGASMIRTKGEAGTGNVVEAVRHMRIINAEIKRLTTLREDELMAAAKELQAPYELVKYVAQHGRLPVVNFAAGGIATPADAALMMQLGADGVFVGSGIFKSQNPEKMAEAIVKAVTYYDKPEILAEVSEGLGEAMQSIDIRKLDEKDLYASRGW

Annotated regions:
phrase: ELNKNLAQMLKGGVIMDVTTPEQAVIAEKAGAVAVMALERVPADIRARGGVARMSDPKIIKEIKAAVSIPVMAKVRIGHFVEAQILEALGIDFIDESEVLTPADEMYHIDKWAFKIPFVCGARNLGEALRRIGEGASMIRTKGEAGTGNVVEAVRHMRIINAEIKRLTTLREDELMAAAKELQAPYELVKYVAQHGRLPVVNFA
type: DOMAIN
name: PdxS/SNZ_N
description: PdxS/SNZ N-terminal domain
Protein sequence:
MGSNKHILLAVSGGIAAYKSAELVRVMRKSGAEVRVVMTQAATQFVSPLTFQALSGHPVHTDILNAEAEHAMDHISLARWADAMIIAPATANTIAKCSLGMADDLLSTLYLAAKCAVYMAPSMNQAMWHHPATQENIARLLSHGVTLIGPEAGEQACGETGLGRMSDPIIICEQVLAESSMLLNGLKVLISAGPTREPLDPVRYITNRSSGKMGYALAKAALQAGAQVTLVTGPVSLAVPNGVEAVKVETAAQMYQAVLARASDHDIYIGAAAVADYSPGDVQPEKIKKNQLQTTVILNKTQDILADVALLKVRPFTVGFAAETENLEGYALGKLNAKNLDMIAANWVGQSSQGGFDSDQNALQLFWKGGQKTLPMVDKHYLAKQLIEVIAERWDEKNTA

Annotated regions:
phrase: LNGLKVLISAGPTREPLDPVRYITNRSSGKMGYALAKAALQAGAQVTLVTGPVSLAVPNGVEAVKVETAAQMYQAVLARASDHDIYIGAAAVADYSPGDVQPEKIKKNQLQTTVILNKTQDILADVALLKVRPFTVGFAAETENLEGYALGKLNAKNLDMIAANWVGQSSQGGFDSDQNALQ
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal

phrase: KHILLAVSGGIAAYKSAELVRVMRKSGAEVRVVMTQAATQFVSPLTFQALSGHPVHTDILNAEAEHAMDHISLARWADAMIIAPATANTIAKCSLGMADDLLSTLYLAAKCAVYMAPSMNQAMWHHPATQENIARLLSHGVTLIGPEAGEQACGETGLGRMS
type: DOMAIN
name: Flavoprotein
description: Flavoprotein
Protein sequence:
MNQILIQGVIIIISLLSIIIINQKDIILINIKNKYIKQISLLLIIYFIYIGIYINYLFNNNILGFQLINNYININWGIDGISLWLINLTLILLPISLISNWNISKNEDKSKVLTYVLLILIIGIIIILNFICLDLITFYILFEATLLPLFILIGKLGSLPYNGNNKIIIKGINNNNITPREKAAYYIFIYTLFSSLFMLLSIGIYIYMINNIDYNNIYNIILSIDLQSIIFIGLIIGILVKTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRLILINLSDVIIIYNPLIYTIGILTIFYIGLITLKQIDIKVIIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLVGGILYDRYHSRLIYYYQSLATYMPIFSIYLLIAGLFNMGIPLSLNFIGEFLSLNGIFIYNSLFAILSTFSLFITTIYQMKLTTKLLYGYKSIYINIWSIWGNDVNKRELLLLNILFFFIILFGIYPNLIIKSLNLSISSLLYIPF

Annotated regions:
phrase: DLITFYILFEATLLPLFILIGKLGSLPYNGNNKIIIKGINNNNITPREKAAYYIFIYTLFSSLFMLLSIGIYIYMINNIDYNNIYNIILSIDLQSIIFIGLIIGILVKTPVFPVHTWLPLVHAESPISGSIILAGIIIKLAIYAIIRLILINLSDVIIIYNPLIYTIGILTIFYIGLITLKQIDIKVIIAYSSIIHMAIAIMSIFSNNILGIEGSLLISIAHGFASPALFLLVGGILYDRYHSRLIYYYQSLATYMPIFSIYLLIAGLFNMGIPLSLNFIGEFLSLNGIFIYNSLFAILSTFSLFI
type: DOMAIN
name: ND/Mrp_TM
description: NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domain
Protein sequence:
MALAHNLGFPRIGRDRELKKAQEAFWKGELDEAGLRKVGRDLRAAHWQAQKDAGIELLPVGDFAWYDQVLTHSLTFGVIPERFRGHDGAKPTLQTLFAMARGVATGRSANCCGGAHAQEMTKWFDTNYHYLVPEFTVDQQFALSWEQLFEEVDEAKALGHAAKPVVIGPLTYLWLGKAKGGDFDKLELLDRLLPVYDEILNRLAGQGVEWVQIDEPILVLDLPQEWKNAYERVYNILQRAPLKKLVATYFGGLEENLGLAANLPVDGLHIDLVRAPEQYPTILDRLPAYKILSLGLVNGRNVWACDLEKAVDVLRHAAERLGDRLWVAPSCSLLHSPVDLGREDQLDTELKSWLAFAVQKCQEVAVLAKAVNQPDAAEVAAALARSRAIQAGRASSPRIHKPAVQARVHAIKPGDSQRQSAFGQRIAKQRAGLNLPAYPTTTIGSFPQTPAIRLARQAFKQGKLTEADYVEAMHSEIRHAVQIQENLGLDVLVHGEAERNDMVEYFAEQLDGYVFTRFGWVQSYGSRCVKPAVIYGDLSRPEAMTVAWIRYAQGLTRKVMKGMLTGPVTMLMWSFPREDVSRETQARQLALAIRDEVLDLEAADIKIVQIDEAAFREGLPLRRSAWPAYLEWATEAFRLCASGVRDETQIHTHMCYSEFNDVIESIAAMDADVITIETSRSDMELLEAFEKFDYPNEIGPGVYDIHSPRVPSREEMVKLLRKAALRIPAERLWVNPDCGLKTRAWPETEAALVNMVAAARELRATA

Annotated regions:
phrase: PTTTIGSFPQTPAIRLARQAFKQGKLTEADYVEAMHSEIRHAVQIQENLGLDVLVHGEAERNDMVEYFAEQLDGYVFTRFGWVQSYGSRCVKPAVIYGDLSRPEAMTVAWIRYAQGLTRKVMKGMLTGPVTMLMWSFPREDVSRETQARQLALAIRDEVLDLEAADIKIVQIDEAAFREGLPLRRSAWPAYLEWATEAFRLCASGVRDETQIHTHMCYSEFNDVIESIAAMDADVITIETSRSDMELLEAFEKFDYPNEIGPGVYDIHSPRVPSREEMVKLLRKAALRIPAERLWVNPDCGLKTRAWPETEAALVNMVAAAR
type: DOMAIN
name: Met_Synth_C/arc
description: Cobalamin-independent methionine synthase MetE, C-terminal/archaeal

phrase: PTTTIGSFPQTPAIRLARQAFKQGKLTEADYVEAMHSEIRHAVQIQENLGLDVLVHGEAERNDMVEYFAEQLDGYVFTRFGWVQSYGSRCVKPAVIYGDLSRPEAMTVAWIRYAQGLTRKVMKGMLTGPVTMLMWSFPREDVSRETQARQLALAIRDEVLDLEAADIKIVQIDEAAFREGLPLRRSAWPAYLEWATEAFRLCASGVRDETQIHTHMCYSEFNDVIESIAAMDADVITIETSRSDMELLEAFEKFDYPNEIGPGVYDIHSPRVPSREEMVKLLRKAALRIPAERLWVNPDCGLKTRAWPETEAALVNMVAAA
type: DOMAIN
name: Met_Synth_C/arc
description: Cobalamin-independent methionine synthase MetE, C-terminal/archaeal

phrase: AHNLGFPRIGRDRELKKAQEAFWKGELDEAGLRKVGRDLRAAHWQAQKDAGIELLPVGDFAWYDQVLTHSLTFGVIPERFRGHDGAKPTLQTLFAMARGVATGRSANCCGGAHAQEMTKWFDTNYHYLVPEFTVDQQFALSWEQLFEEVDEAKALGHAAKPVVIGPLTYLWLGKAKGGDFDKLELLDRLLPVYDEILNRLAGQGVEWVQIDEPILVLDLPQEWKNAYERVYNILQRAPLKKLVATYFGGLEENLGLAANLPVDGLHIDLVRAPEQYPTILDRLPAYKILSLGLVNGRNVWACDLEKAVDVLRHAAE
type: DOMAIN
name: Cbl-indep_Met_Synth_N
description: Cobalamin-independent methionine synthase MetE, N-terminal
Protein sequence:
MALLNRDDWYDIARDVDWTLSYVDRAVAFPEEWKGEKDICGTAWDDWDEPFRVSFREYVMVQRDKEASVGAIREAMVRAKAYEKLDDGHKATSHLHMGTITMVEHMAVTMQSRFVRFAPSARWRSLGAFGMLDETRHTQLDLRFSHDLLNDSPSFDWSQRAFHTDEWAVLATRNLFDDIMLNADCVEAALATSLTLEHGFTNIQFVALASDAMEAGDVNFSNLLSSIQTDEARHAQLGFPTLDVMMKHDPKRAQQILDVAFWRSYRIFQAVTGVSMDYYTPVAKRQMSFKEFMLEWIVKHHERILRDYGLQKPWYWDTFEKTLDHGHHALHIGTWFWRPTLFWDPNGGVSREERRWLNQKYPNWEESWGVLWDEIISNINAGNIEKTLPETLPMLCNVTNLPIGSHWDRFHLKPEQLVYKGRLYTFDSDVSKWIFELDPERYAGHTNVVDRFIGGQIQPMTIEGVLNWMGLTPEVMGKDVFNYRWAGDYAENRIAAE

Annotated regions:
phrase: GSHWDRFHLKPEQLVYKGRLYTFDSDVSKWIFELDPERYAG
type: DOMAIN
name: YHS_dom
description: YHS domain
Protein sequence:
MMWWAVWCAAMVAGSVFTAAAPPTDSIDLMQMDPSLADDESLGFAMQSLSGRYAAAPWLYLLADVSHDPQRMAEFSQSSGRARPKRKMPSLSINNPMEVLRQRLLLEVARKQMREANQRQAVANRLFLQNVGKRGAWGEPASYLYNN

Annotated regions:
phrase: PSLSINNPMEVLRQR
type: CONSERVED_SITE
name: Corticotropin-releasing_fac_CS
description: Corticotropin-releasing factor conserved site

phrase: PSLSINNPMEVLRQRLLLEVARKQMREANQRQAVANRLFLQN
type: DOMAIN
name: CRF
description: Corticotropin-releasing factor

phrase: KMPSLSINNPMEVLRQRLLLEVARKQMREANQRQAVANRLFLQN
type: DOMAIN
name: CRF
description: Corticotropin-releasing factor
Protein sequence:
MTYFEAFFLALLQGFTEFLPISSSAHLILPSAILGWSDQGLAFDVAVHVGTLAAVVIYFRKEVVTLLTAWVGSIVKKEHNKESNLAWLIVLATIPAALFGLLFKDFIEIYLRSAWVIAATTIVFGLLLWWVDKNATLAKDEYQMTWKKALFLGIAQAMAMIPGTSRSGITITAALYLGFTREAAARFSFLMSIPIITLAGSYLGLKLAMSDISIHLGLLSTGVIVSFISAYICIHFFLKLISSMGMMPFVIYRILLGSSLLVWLALH

Annotated regions:
Protein sequence:
MPSLAEEICIGNLGSLQTLPESFTWKLTAADSLLRPSSAVSFDAVEESIPVIDLSNPDVTTLIGDASKTWGAFQIANHGISQKLLDDIESLSKTLFDMPSERKLEAASSDKGVSGYGEPRISPFFEKKMWSEGFTIADDSYRNHFNTLWPHDHTKYCGIIQEYVDEMEKLASRLLYCILGSLGVTVEDIEWAHKLEKSGSKVGRGAIRLNHYPVCPEPERAMGLAAHTDSTILTILHQSNTGGLQVFREESGWVTVEPAPGVLVVNIGDLFHILSNGKIPSVVHRAKVNHTRSRISIAYLWGGPAGDVQIAPISKLTGPAEPSLYRSITWKEYLQIKYEVFDKAMDAIRVVNPTN

Annotated regions:
phrase: AIRLNHYPVCPEPERAMGLAAHTDSTILTILHQSNTGGLQVFREESGWVTVEPAPGVLVVNIGDLFHILSNGKIPSVVHRAKVNHTRSRISIAY
type: DOMAIN
name: IPNS-like_FE2OG_OXY
description: Isopenicillin N synthase-like, Fe(2+) 2OG dioxygenase domain

phrase: GRGAIRLNHYPVCPEPERAMGLAAHTDSTILTILHQSNTGGLQVFREESGWVTVEPAPGVLVVNIGDLFHILSNGKIPSVVHRAKVNHTRSRISIAYLWG
type: DOMAIN
name: Oxoglu/Fe-dep_dioxygenase_dom
description: Oxoglutarate/iron-dependent dioxygenase domain

phrase: IPVIDLSNPDVTTLIGDASKTWGAFQIANHGISQKLLDDIESLSKTLFDMPSERKLEAASSDKGVSGYGEPRISPFFEKKMWSEGFTIADDSYRNHFNTLW
type: DOMAIN
name: DIOX_N
description: Non-haem dioxygenase N-terminal domain
Protein sequence:
MSTFMAKPHEVERKWYVIDAAGKTLGRVATEAARLLRGKHKPIFTPHVDTGDYVIIINAAKVRLTGNKLQKKQYIRHTGYPGGLRVMNYATLLRTFPERAVEKAVKGMIPHNSLGRKMVKKLKVYRGDSHPHAAQQPQVWEIKD

Annotated regions:
phrase: VKGMIPHNSLGRKMVKKLKVYR
type: CONSERVED_SITE
name: Ribosomal_uL13_CS
description: Large ribosomal subunit protein uL13, conserved site
Protein sequence:
MQEAQYLTSDLSVKAKASNLNLWYGQKQALHDINIDIYERKITALIGPSGCGKSTFLRCLNRMNDLVGGCRVEGLVEVDGFNIYDPAIDVVAVRKRVGMVFQQPNPFPKSIYENIAYAPLMHDLVKKGSDCDQLVEESLKGAGLWEEVKDKLKSPGTALSGGQQQRLCIARAIAVKPEIILMDEPTSALDPISTQTIENLMVTLKEQFTIVVVTHNMQQAARVANYTAFFHLGELIEYDETEKIFVSPQKSKTEQYITGKFG

Annotated regions:
phrase: AKASNLNLWYGQKQALHDINIDIYERKITALIGPSGCGKSTFLRCLNRMNDLVGGCRVEGLVEVDGFNIYDPAIDVVAVRKRVGMVFQQPNPFPKSIYENIAYAPLMHDLVKKGSDCDQLVEESLKGAGLWEEVKDKLKSPGTALSGGQQQRLCIARAIAVKPEIILMDEPTSALDPISTQTIENLMVTLKEQFTIVVVTHNMQQAARVANYTAFFHLGELIEYDETEKIFVSPQKSKTEQY
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: LHDINIDIYERKITALIGPSGCGKSTFLRCLNRMNDLVGGCRVEGLVEVDGFNIYDPAIDVVAVRKRVGMVFQQPNPFPKSIYENIAYAPLMHDLVKKGSDCDQLVEESLKGAGLWEEVKDKLKSPGTALSGGQQQRLCIARAIAVKPEIILMDEPT
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: LSGGQQQRLCIARA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: ERKITALIGPSGCGKSTFLRCLNRMNDLVGGCRVEGLVEVDGFNIYDPAIDVVAVRKRVGMVFQQPNPFPKSIYENIAYAPLMHDLVKKGSDCDQLVEESLKGAGLWEEVKDKLKSPGTALSGGQQQRLCIARAIAVKPEIILMDEPTSALDPISTQTIENLMVTLKEQFTIVVVTHNMQQAARVANYTAFFHLGELI
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain
Protein sequence:
MTLYDKEINKNSLLIPMVIEKTSYGERSYDIYSRLLKERIIFLTGTIDDNTANLIVAQMLFLEAENAKQDIYIYINSPGGVITAGMSIYDTMKFIKPNVNTICIGQACSMAALILTAGKKGYRYCLPNSRIMIHQPIGGYNGQASDIEIHAKEIIKVKRKLNELMAFHTSQSINTIEKDTERDCFLSANQAIKYGLIDTILSYRT

Annotated regions:
phrase: RYCLPNSRIMIHQ
type: ACTIVE_SITE
name: ClpP_His_AS
description: ClpP, histidine active site

phrase: TICIGQACSMA
type: ACTIVE_SITE
name: ClpP_Ser_AS
description: ClpP, Ser active site
Protein sequence:
MWARNLMARALYDNVPECAEELAFRKGDILTVIEQNTGGLEGWWLCSLHGRQGIVPGNRVKLLIGPVQETPGHEQPTPGPMHQTFGQQKLYQVPNSQAASRDTIYQVPPSYQNQGIYQVPTGHGTPEQDVYQVPPSVQRNIGGTNGPLLSKKVITPVRTGHGYVYEYPSRYQKDVYDVPPSHSTQGVYDIPPSSVKGPVFSVPVGEIKPQGVYDIPPTQGVYAIPPSACRDEAGLREKEYDFPPPMKQDGKPDTRPEGVYDIPPTSTKTAGKDLHIKFPCDAPGGVEPMARRHQSFSLHHAPSQLGQSGDTQSDAYDVPRGVQFLEVPTETSEKANPEERDGVYDVPLHNPADAKGSRDVVDGINRLSFSSTGSTRSNMSTSSTSSKESSLSASPSQDKRLRLDPDTAIEKLYRLQQTLEMGVCSLMSLVTTDWRCYGYMERHINEIRTAVDKVELFLREYLHFAKGALANASCLPELVLHNKMKRELQRVEDSHQILSQTSHDLNECSWSLNILAINKPQNKCDDLDRFVMVAKTVPDDAKQLTTTISTYAETLFRADPANSHLKNGPNSIMNSSEYTHPGSQMQPLHPGDYKAQVHSKPLPPSLSKDQPPDCGSSDGSERSWMDDYDYVHLQGKEEFERQQKELLEKENIMKQSKAQLEHHQLSQFQLLEQEITKPVENDISKWKPSQSLPTTNNSVGAQDRQLLCFYYDQCETHFISLLNAIDALFSCVSSAQPPRIFVAHSKFVILSAHKLVFIGDTLTRQVAA

Annotated regions:
phrase: ARNLMARALYDNVPECAEELAFRKGDILTVIEQNTGGLEGWWLCSLHGRQGIVPGNRVKLLI
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: LDPDTAIEKLYRLQQTLEMGVCSLMSLVTTDWRCYGYMERHINEIRTAVDKVELFLREYLHFAKGALANASCLPELVLHNKMKRELQRVEDSHQILSQTSHDLNECSWSLNILAINKPQNKCDDLDRFVMVAKTVPDDAKQLTTTISTYAETLFR
type: DOMAIN
name: Serine_rich_dom
description: Serine rich protein interaction domain

phrase: MARALYDNVPECAEELAFRKGDILTVIEQNTGGLEGWWLCSLHGRQGIVPGNRVKL
type: DOMAIN
name: NEDD9_SH3
description: Enhancer of filamentation 1, SH3 domain

phrase: SERSWMDDYDYVHLQGKEEFERQQKELLEKENIMKQSKAQLEHHQLSQFQLLEQEITKPVENDISKWKPSQSLPTTNNSVGAQDRQLLCFYYDQCETHFISLLNAIDALFSCVSSAQPPRIFVAHSKFVILSAHKLVFIGDTLTRQV
type: DOMAIN
name: CAS_C
description: CAS family, C-terminal

phrase: ALYDNVPECAEELAFRKGDILTVIEQNTGGLEGWWLCSLHGRQGIVPGNRV
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: LMARALYDNVPECAEELAFRKGDILTVIEQNTGGLEGWWLCSLHGRQGIVPGNRVKLL
type: DOMAIN
name: SH3_domain
description: SH3 domain
Protein sequence:
MLSSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFTQPASGHWYFTLKDDTAQVRCAMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQVIAESMQPAGEGLLQQKYEQLKAKLQAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDAPGQIVRAIELANARGECDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSAVGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRRFTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQANQRQQRVSQRLSQQNPQPRIHRAQSRIQQLEYRLTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTDGKVLKKIKQVNAGDIMTTRLEDGWLESEVKSVTPGT

Annotated regions:
phrase: LFDQQHKQPLPSPAHCVGVITSKTGAALHDILHVLKRRDPSLPVIIYPTAVQGDDAPGQIVRAIELANARGECDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSAVGHETDVTIADFVADLRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRRFTQIFHRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQANQRQQRVSQRLSQQNPQPRIHRAQSRIQQLEYRLTENIRSRLSEQRERFGNAVTHLEAVSPLATLARGYTVSTTTDGKVLKKIKQVNAGDIMTTRLEDGWLE
type: DOMAIN
name: Exonuc_VII_lsu_C
description: Exonuclease VII, large subunit, C-terminal

phrase: QVWISGEISNFTQPASGHWYFTLKDDTAQVRCAMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQVIAESMQPA
type: DOMAIN
name: OB-fold_nuc-bd_dom
description: OB-fold nucleic acid binding domain

phrase: FTVSRLNQTVRLLLEQEMGQVWISGEISNFTQPASGHWYFTLKDDTAQVRCAMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQVIAESM
type: DOMAIN
name: OB-fold_nuc-bd_dom
description: OB-fold nucleic acid binding domain
Protein sequence:
MAAAGGGWAAACEKFRSARTLSAVESRKDPETEPYRSKYSARALLQEVKQQLSAAEDCGEARLLAVRRAVLEYELGVNHTDTEELSAGEEHLQRCTQLLEPHRLSRDCVSLYIQAQNNLGILWSERDEIKTAQTYLESAEALYNQYMKEDGNPPLDPSEHFMAEEEKLTDQERSKRFEKAYTHTLYYLAQVYQHLEMIEKAAQYCHTTLKRQLEYCGYYPVEWALNAATLSQYYLSKQCFMESRHCLAAASVIFSQAGQVPSTEDNETEQDQQDLRQRKAEIARCWIKYCLNLLQSARKLLEDNIGELDPDRQLELKAQRKKEEDEKENGRKKAVLFGTSDICDSVLAMEEKVSSVYPLDFQEAREIFLVGQNYVQEAKEFFQVDGYVTDHIEIVQDHSALFKVLAFFEEDYERRCKMHKRRIDMLEPIYADLNPQYYLLISRQLQFELADTYYEMMDLKVAIGNRLEELDSHTIKKINSLAQLAIKYYELFLDSLRNPDKVFPEELEEDVLRPAMVAKFHIARLYGKLITSDSKKQLENMQTSLEYYTFLVDYCEKHPDAVRAVETELELSKEMVGLLPTRMERLRAKLCPFI

Annotated regions:
Protein sequence:
MSKKLYIKTYGCQMNVYDSVKMQDLLYPYGYEPTENIEEADVIILNTCHIREKAAEKTYSELGRIKKLQDARKKQGLNSAIIVVAGCVAQAEGEEIFTRTPYVDIVVGPQSYYNLPELISKVVRHEKHLIDLDFVEEAKFDQLPEQLYPQGASSFISVQEGCDKFCTFCVVPYTRGAEFSRNVEQVYREALKVVSSGAKEIMLLGQNVNAYHGKTSDDKVFTLADLIRHLVKIPNLERLRYTTSHPIDMTDDLISLHGLEPKLMPFLHLPVQSGSNKTLKAMNRKHDRDYYFDIIDRLRKARADIVLSSDFIVGFPGETDEDFADTLDLVRKVKYGQCYSFKYSPRPGTPGATRTDQVPEHIKSERLTILQKELAAQQLAFNESCIGSTMKVLFDRDGKFDDQIIGKTPYMQSVYIKNPNKDLLGKIIEVKITKAALNSLSGEIYR

Annotated regions:
phrase: YPQGASSFISVQEGCDKFCTFCVVPYTRGAEFSRNVEQVYREALKVVSSGAKEIMLLGQNVNAYHGKTSDDKVFTLADLIRHLVKIPNLERLRYTTSHPIDMTDDLISLHGLEPKLMPFLHLPVQSGSNKTLKAMNRKHDRDYYFDIIDRLRKARADIVLSSDFIVGFPGETDEDFADTLDLVRKVKYGQCYSFKYSPRPGTPGATRTDQVPEHIKSERLTILQKELAAQQL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: ISVQEGCDKFCTFCVVPYTR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: ESCIGSTMKVLFDRDGKFDDQIIGKTPYMQSVYIKNPNKDLLGKIIEVKITKAALNSLSGEIY
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: ASSFISVQEGCDKFCTFCVVPYTRGAEFSRNVEQVYREALKVVSSGAKEIMLLGQNVNAYHGKTSDDKVFTLADLIRHLVKIPNLERLRYTTSHPIDMTDDLISLHGLEPKLMPFLHLPVQSGSNKTLKAMNRKHDRDYYFDIIDRLRKARADIVLSSDFIVGFPGETDEDFADTLDLVRKVKYGQCYSFKYSPRPGTPGATRTDQVPEHIKSERLTILQ
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: SCIGSTMKVLFDRDGKFDDQIIGKTPYMQSVYIKNPNKDLLGKIIEVKITKAALNSLSGE
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: ISVQEGCDKFCTFCVVPYTRGAEFSRNVEQVYREALKVVSSGAKEIMLLGQNVNAYHGKTSDDKVFTLADLIRHLVKIPNLERLRYTTSHPIDMTDDLISLHGLEPKLMPFLHLPVQSGSNKTLKAMNRKHDRDYYFDIIDRLRKARADIVLSSDFIVGFPGETDEDFADTLDL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: KLYIKTYGCQMNVYDSVKMQDLLYPYGYEPTENIEEADVIILNTCHIREKAAEKTYSELGRIKKLQDARKKQGLNSAIIVVAGCVAQAEGEEIFTRTPYVDIVV
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: SKKLYIKTYGCQMNVYDSVKMQDLLYPYGYEPTENIEEADVIILNTCHIREKAAEKTYSELGRIKKLQDARKKQGLNSAIIVVAGCVAQAEGEEIFTRTPYVDIVVGPQSYYNLPELISKVVRHEKHLIDLDFVEEAKFDQLPEQLYPQGASSFISVQEGCDKFCTFCVVPYTRGAEFSRNVEQVYREALKVVSSGAKEIMLLGQNVNAYHGKTSDDKVFTLADLIRHLVKIPNLERLRYTTSHPIDMTDDLISLHGLEPKLMPFLHLPVQSGSNKTLKAMNRKHDRDYYFDIIDRLRKARADIVLSSDFIVGFPGETDEDFADTLDLVRKVKYGQCYSFKYSPRPGTPGATRTDQVPEHIKSERLTILQKELAAQQLAFNESCIGSTMKVLFDRDGKFDDQIIGKTPYMQSVYIKNPNKDLLGKIIEVKITKAALNSLSGEI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: KKLYIKTYGCQMNVYDSVKMQDLLYPYGYEPTENIEEADVIILNTCHIREKAAEKTYSELGRIKKLQDARKKQGLNSAIIVVAGCVAQAEGEEIFTRTPYVDIVVGPQSYYNLPELISKVV
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal
Protein sequence:
MARKAQTSHFDSIEQAIKDIKKGRFIILVDDEDRENEGDLVMAAEKVTPQAINFMAKHARGLICLALTPERVEELQLPPQAHENTATFGTAFTVSIDARHDITTGISAADRATTIHVAIDPKTKPADLARPGHIFPLKGQKGGVLRRAGQTEGSVDLARLAGLSPAGVICEIMNEDGTMARVPELGKFAKVHGLKMVTIKSLIEYRVRRETFVRRIASARLPTIFGEFEAVAFENEMDGGTHVALVKGQVDNPSPTLVRVHSGCLTADVFGSLRCDCRDQLHSAMELIQKEGRGVLLYLNQEGRGIGLLNKIRAYKLQDEGSDTVEANLQLGFKADLRDYGTGAQILVNLGLHQIRLITNNPRKIVGIEGYGLKVVERVPIEIPPRAANERYLRTKKHKLGHILKKV

Annotated regions:
phrase: RIASARLPTIFGEFEAVAFENEMDGGTHVALVKGQVDNPSPTLVRVHSGCLTADVFGSLRCDCRDQLHSAMELIQKEGRGVLLYLNQEGRGIGLLNKIRAYKLQDEGSDTVEANLQLGFKADLRDYGTGAQILVNLGLHQIRLITNNPRKIVGIEGYGLKVVERV
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II