nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSTNPKPQRKTKRNTNRRPQDVKFPGGGQIVGGVYLLPRRGPRLGVRATRKTSERSQPRGRRQPIPKARRPEGRVWAQPGYPWPLYGNXGCGWAGWLLSPRGSRPSWGPTDPRRRSRNLGKVIDTLTCGFADLMGYIPLVGAPLGGAARALAHGVRVLEDGVNYATGNLPGCSFSIFLLALLSCLTVPASAYQVRNSSGLYHVTNDCPNSSIVYEAADAILHAPGCVPCVREGNASKCWVAVTPTVATRDGKLPTTQLRRHIDLLVGSATLCSALYVGDLCGSVFLVGQLFTLSPRRHWTTQDCNCSMYPGHITGHRMAWDMMMNWSPTTALVVAQLLRIPQAILDMIAGAHWGVLAGIAYFSMVGNWAKVLVVLLLFAGVDAETHVTGGATARATSGFVGLFRTGPKQNIQLINSNGSWHINSTALNCNASLDTGWLAGLLYYNRFNSSGCPERMASCRPLTDFAQGWALSV

Annotated regions:
phrase: STNPKPQRKTKRNTNRRPQDVKFPGGGQIVGGVYLLPRRGPRLGVRATRKTSERSQPRGRRQPIPKARRPEGRVWAQPGYPWPLYGNXGCGWAGWLLSPRGSRPSWGPTDPRR
type: DOMAIN
name: HCV_core_N
description: Hepatitis C virus, Core protein, N-terminal

phrase: QVRNSSGLYHVTNDCPNSSIVYEAADAILHAPGCVPCVREGNASKCWVAVTPTVATRDGKLPTTQLRRHIDLLVGSATLCSALYVGDLCGSVFLVGQLFTLSPRRHWTTQDCNCSMYPGHITGHRMAWDMMMNWSPTTALVVAQLLRIPQAILDMIAGAHWGVLAGIAYFSMVGNWAKVLVVLLLFAGV
type: DOMAIN
name: HCV_Env
description: Hepatitis C virus, Envelope glycoprotein E1

phrase: SRNLGKVIDTLTCGFADLMGYIPLVGAPLGGAARALAHGVRVLEDGVNYATGNLPGCSFSIFLLALLSCLTVPA
type: DOMAIN
name: HCV_Core_C
description: Hepatitis C virus, Core protein, C-terminal

phrase: HVTGGATARATSGFVGLFRTGPKQNIQLINSNGSWHINSTALNCNASLDTGWLAGLLYYNRFNSSGCPERMASCRPLTDFAQGW
type: DOMAIN
name: HCV_NS1
description: Hepatitis C virus, Non-structural protein E2/NS1
Protein sequence:
MSNFKLFSGSANPEFAKKVGEYLGMPVSDATLNKFSDGEISVQITESVRGQDVFIIQPTCAPTNDNLMELLIMVDALKRSSAKSISAVVPYYGYARQDRKAAPRVPISAKLVADLLEAAGITRVVTIDLHAAQIQGFFNIPADNLFGSILFVNYIRSKNLKNPIIASPDIGGVARARLYADKLGYDLVIVDKKREKANVAEVMNIIGEVKGKDVILVDDMVDTAGTLVKAAEVLKKRGATSVMACCTHGVLSGPAYDRIEKGELDELVISDTIPAKKEIKKITVLTASAIIGEAIRRIHNNESVNSIFNN

Annotated regions:
phrase: LFVNYIRSKNLKNPIIASPDIGGVARARLYADKLGYDLVIVDKKREKANVAEVMNIIGEVKGKDVILVDDMVDTAGTLVKAAEVLKKRGATSVMACCTHGVLSGPAYDRIEKGELDELVISD
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: KLFSGSANPEFAKKVGEYLGMPVSDATLNKFSDGEISVQITESVRGQDVFIIQPTCAPTNDNLMELLIMVDALKRSSAKSISAVVPYYGYARQDRKAAPRVPISAKLVADLLEAA
type: DOMAIN
name: Pribosyltran_N
description: Ribose-phosphate pyrophosphokinase, N-terminal domain
Protein sequence:
MKIKTLAMIVVSALALSSTAALADTTTVNGGTVHFKGEVVNAACAVDAGSIDQTVQLGQVRSAKLATAGSTSSAVGFNIQLDDCDTTVATKASVAFAGTAIDSSNTTVLALQNSAAGSATNVGVQILDNTGTPLALNGATFSAATTLNDDPNIIPFQARYYATGAATAGIANADATFKVQYE

Annotated regions:
phrase: VHFKGEVVNAACAVDAGSIDQTVQLGQVRSAKLATAGSTSSAVGFNIQLDDCDTTVATKASVAFAGTAIDSSNTTVLALQNSAAGSATNVGVQILDNTGTPLALNGATFSAATTLNDDPNIIPFQARYYATGAATAGIANADATFKVQY
type: DOMAIN
name: Adhesion_dom_fimbrial
description: Fimbrial-type adhesion domain
Protein sequence:
MSEITKITAQKRRGRYNIFIDGTYAFPVSETTLVDYRLAKGMVLTAETIAQIKSSEVTAMGLEIGLTYISHQSRTSKEVSDRLAKEDLPADVIQKVLTRLTDLGFLDDADYAHRYIEEHLKMGELGPRTLQHKLQQKGLKPDLLANELAAIPTTAWLDAAVRAGQKNLRHHQHRAYKDQLQRLRVALMQKGFDDTTIQTAIATIDPQPDPEAESDLLKLEAAKQWRLKAKYGDRERKQKV

Annotated regions:
phrase: DDADYAHRYIEEHLKMGELGPRTLQHKLQQKGLKPD
type: DOMAIN
name: RecX_HTH_2nd
description: RecX, second three-helical domain

phrase: EIGLTYISHQSRTSKEVSDRLAKEDLPADVIQKVLTR
type: DOMAIN
name: RecX_HTH_1st
description: RecX, first three-helical domain
Protein sequence:
MTQVMTLEQLAEQIRTGLVSLHTDSRKVMPGDAFVAVPGASMDGGDFICDALEKGAAYVVCRERSMPADAGDARFVLHEDPQTALGILAGVKFSTTELSFPVVGVTGTNGKTTVTYMLEHLFNAAGRRAGVIGTVSYRWPGTELEAKMTTPDCLKVHALLARMAVAGVDGVFMEVSSHALDQNRTAGVEYSGAILTNLTQDHLDYHGDMETYFQAKRRLFTSVPKAGKACVVNVDDPYGRRLLPELPNGIGFTLHDVKIEGCRILSGEVLSCTVEGLHLRMTLDGESWELVSPMVGYHNASNLLAVQGMGRALGLSAEDMRGLEGFNGVPGRLERIPNAKGVHAFVDYAHTPDALENVLTALRRVGFERIITVFGCGGDRDRRKRPLMGEAVCHHTDVAVLTSDNPRTEDPVAILEDVKPGLGGCTRVLIDPDRRKGIALAVAEARPGDCILVAGKGHEDYQIIGTQKFPFSDQAVLKELLG

Annotated regions:
phrase: LHTDSRKVMPGDAFVAVPGASMDGGDFICDALEKGAAYVVCRER
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: GRLERIPNAKGVHAFVDYAHTPDALENVLTALRRVGFERIITVFGCGGDRDRRKRPLMGEAVCHHTDVAVLTSDNPRTEDPVAILEDVKPGLGGCTRVLIDPDRRKGIALAVAEARPGDCILVAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: VTGTNGKTTVTYMLEHLFNAAGRRAGVIGTVSYRWPGTELEAKMTTPDCLKVHALLARMAVAGVDGVFMEVSSHALDQNRTAGVEYSGAILTNLTQDHLDYHGDMETYFQAKRRLFTSVPKAGKACVVNVDDPYGRRLLPELPNGIGFTLHDVKIEGCRILSGEVLSCTVEGLHLRMTLDGESWELVSPMVGYHNASNLLAV
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central
Protein sequence:
ECHKPLHRGGRRGIATSLAGLLLLQAVSGISGARPCSPKSFGYSSVVCVCNATYCDSLDPLTLPGLGTFSRYESTRSGRRMELSMGDFQANRTGTGDHSTPPPSAGLDSFWSEACQSSPVLPLCADTLYSLWMSSGLLLTLQPDQKFQKVKGFGGAMTDAAALNILGLSPPVRDALLRSYFSEEGIEYNIVRVPMASCDFSIRTYTYADTPNDFQLQNFSLPDEDVKLKIPLIHQALQLARRPISLFASPWTSPTWLKTNGAVNGKGTLKGQPGDRYHQTWARYFVKFLDAYAEHKLKFWAVTAENEPSAGLFSGYPFQCLGFTPEHQRDFIARDLGPTLANSTHHDVLLLMLDDQRLLLPHWAQVVLADPEAAKYVHGIAVHWYLDFLAPAKATLGETHRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGVQYSHSIITNLLYHVVGWTDWNLALNPKGGPNWVRNFVDSPVIVDISKDTFYKQPMFYHLGHFSKFIPEGSQRVGLVASEKTDLETVALTHPDGSAVVVMLNRSSKDVPLTIKDPALGFLETISPGYSIHTYLWRRQCQ

Annotated regions:
phrase: VKGFGGAMTDAAALNILGLSPPVRDALLRSYFSEEGIEYNIVRVPMASCDFSIRTYTYADTPNDFQLQNFSLPDEDVKLKIPLIHQALQLARRPISLFASPWTSPTWLKTNGAVNGKGTLKGQPGDRYHQTWARYFVKFLDAYAEHKLKFWAVTAENEPSAGLFSGYPFQCLGFTPEHQRDFIARDLGPTLANSTHHDVLLLMLDDQRLLLPHWAQVVLADPEAAKYVHGIAVHWYLDFLAPAKATLGETHRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGVQYSHSIITNLLYHVVGWTDWNLALNPKGGPNWVRNFVDSPVIVDISKDTFYKQPMFYHLGHFSKF
type: DOMAIN
name: Glyco_hydro_30_TIM-barrel
description: Glycosyl hydrolase family 30, TIM-barrel domain

phrase: GSQRVGLVASEKTDLETVALTHPDGSAVVVMLNRSSKDVPLTIKDPALGFLETISPGYSIHT
type: DOMAIN
name: GH30_C
description: Glycosyl hydrolase family 30, beta sandwich domain
Protein sequence:
MEWVRGETIGFGTFSTVSTATKSRNSGDFPALIAVKSTDAYGAASLSNEKSVLDSLGDCPEIIRCYGEDSTVENGEEMHNLLLEYASRGSLASYMKKLGGEGLPESTVRRHTGSVLRGLRHIHAKGFAHCDIKLANILLFNDGSVKIADFGLAMRVDGDLTALRKSVEIRGTPLYMAPECVNDNEYGSAADVWALGCAVVEMFSGKTAWSVKEGSHFMSLLIRIGVGDELPKIPEMLSEEGKDFLSKCFVKDPAKRWTAEMLLNHSFVTIDLEDDHRENFVVKVKDEDKVLMSPKCPFEFDDWDSFTLDSNPSFDSPVERLGSLVSGSIPDWSVGGSWLTVR

Annotated regions:
phrase: IGFGTFSTVSTATKSRNSGDFPALIAV
type: BINDING_SITE
name: Protein_kinase_ATP_BS
description: Protein kinase, ATP binding site

phrase: RGETIGFGTFSTVSTATKSRNSGDFPALIAVKSTDAYGAASLSNEKSVLDSLGDCPEIIRCYGEDSTVENGEEMHNLLLEYASRGSLASYMKKLGGEGLPESTVRRHTGSVLRGLRHIHAKGFAHCDIKLANILLFNDGSVKIADFGLAMRVDGDLTALRKSVEIRGTPLYMAPECVNDNEYGSAADVWALGCAVVEMFSGKTAWSVKEGSHFMSLLIRIGVGDELPKIPEMLSEEGKDFLSKCFVKDPAKRWTAEMLLNHSF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: FAHCDIKLANIL
type: ACTIVE_SITE
name: Ser/Thr_kinase_AS
description: Serine/threonine-protein kinase, active site

phrase: WVRGETIGFGTFSTVSTATKSRNSGDFPALIAVKSTDAYGAASLSNEKSVLDSLGDCPEIIRCYGEDSTVENGEEMHNLLLEYASRGSLASYMKKLGGEGLPESTVRRHTGSVLRGLRHIHAKGFAHCDIKLANILLFNDGSVKIADFGLAMRVDGDLTALRKSVEIRGTPLYMAPECVNDNEYGSAADVWALGCAVVEMFSGKTAWSVKEGSHFMSLLIRIGVGDELPKIPEMLSEEGKDFLSKCFVKDPAKRWTAEMLLNHSF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: WVRGETIGFGTFSTVSTATKSRNSGDFPALIAVKSTDAYGAASLSNEKSVLDSLGDCPEIIRCYGEDSTVENGEEMHNLLLEYASRGSLASYMKKLGGEGLPESTVRRHTGSVLRGLRHIHAKGFAHCDIKLANILLFNDGSVKIADFGLAMRVDGDLTALRKSVEIRGTPLYMAPECVNDNEYGSAADVWALGCAVVEMFSGKTAWSVKEGSHFMSLLIRIGVGDELPKIPEMLSEEGKDFLSKCFVKDPAKRWTAEMLLNHSF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain
Protein sequence:
MGERKGQNFYYPPDFNYKTHKSLNGYHGTHALRERAKKIDQGILVIRFEMPFNIWCLGCHNHVGMGVRYNAEKKKIGMYYTTPLHEFRMKCHLCDNYYVIRTDPKNFDYELVEGCSRQELRFDPTDIAQIGAVDRGFTQKLAADAMFKKEHEAEDKDKAATEEGRVDKLEWIQERMRDDFTANSFLRAQFRNEKKSLNETRARDANLRDKLSIGTTQLLPETEEDRRIASMMTRYRDTKTHDDHLESSRDRIESRRIFRRPEETDTPSTSSGSSGGAVPSASERLKATMKAERDKRINASFSTAGTSSATQKLLGIKRKSASSLGVQIKKAAPENSSLQDEEPAVEKPNISNPISLIAQEYGNSSDDSD

Annotated regions:
Protein sequence:
MKQIDGGVTAAKGFKAASTAAGIKYKDRKDMAMIYSEVPCKAAGTFTTNLVKAAPVKWDKVVVENSTCAQAVIVNAGIANACTGEEGLRYCMETAEAAAESLSIPVSSVLVASTGVIGKQLPMDRIVAGVKAMVPELDSSQESGTAAAIAIMTTDTVKKEVAVQFEVGGKTITMGGMCKGSGMIHPDMCTMLSFVTTDAAISKELLQEALREDIKDTYNMISVDGDTSTNDTVLLLANGMAGNEEIQSKNEDYEAFCKALNFINETLAKKMAGDGEGCTALFEVKIIGAETKEQAVILSKSVITSSLTKAAIFGHDANWGRILCAMGYSGAVFDPEKVDLYFESAAGKLKIIENGVALSYSEEEATRILSEPEVTATADIKLGEATATAWGCDLTFDYVKINADYRS

Annotated regions:
Protein sequence:
MALSLDLTQDDTRAALAAQAITRADEKPSLIGMDRADMAAALIEAGIPQKQARMRASQLWQWIYWYGHTDFAAMTNIAKDLRAKLADNFTLERPELVEELISTDGTRKWLFRFPARGAGAPVEVETVYIPESDRGTLCISSQVGCTLTCTFCHTGTQKLVRNLTAEEILMQLMVARDRLGDFPDKPPVKAAAKNEEEAFIPDGDRKVSNIVMMGMGEPLYNFEHVKKALLIASDNEGLSLSKRRITLSTSGVVPGIERTGDEIGCGLAISLHATNDELRDVLVPINKKYPIAKLLDACRNYPGASNSKRITFEYVMLDGVNDSLADAKELVRLLKGIPAKINLIPFNPWPGSQYECSSWEKIEAFAEFVNANGYASPVRTPRGRDIFAACGQLKSESERMRKKDRETAEFAARAEALVQPAAE

Annotated regions:
phrase: ESDRGTLCISSQVGCTLTCTFCHTGTQKLVRNLTAEEILMQLMVARDRLGDFPDKPPVKAAAKNEEEAFIPDGDRKVSNIVMMGMGEPLYNFEHVKKALLIASDNEGLSLSKRRITLSTSGVVPGIERTGDEIGCGLAISLHATNDELRDVLVPINKKYPIAKLLDACRNYPGASNSKRITFEYVMLDGVNDSLADAKELVRLLKGIPAKINLIPFNPWPGSQYECSSWEKIEAFAEFVNANGYASPV
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SNIVMMGMGEPLYNFEHVKKALLIASDNEGLSLSKRRITLSTSGVVPGIERTGDEIGCGLAISLHATNDELRDVLVPINKKYPIAKLLDACRNYPGASNSKRITFEYVMLDGVNDSLA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LIGMDRADMAAALIEAGIPQKQARMRASQLWQWIYWYGHTDFAAMTNIAKDLRAKLADN
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MTERIQQDGLQVAAVLHRFIQDEALPAGGIDAPRFWAGFAALVRDLAPRNRALLAERDRLQRELDTWHRAHPGPVRDLRAYRAFLEQIGYLQPVPGTVRVETANVDAEIAEQAGPQLVVPMSNARYALNAANARWGSLYDALYGTDAIPPTPGDTGRGYHPQRGQAVIARARAFLDEAVPLAQGSHADATGYSVDNGQLRVALAQGSTGLAQPEQFAGYQGDAQAPQAILLKHHGLHIEIQIDRAHSIGATDAAGIKDVVVEAALTTIMDCEDSVAAVDAEDKVQVYRNWLGLMKGDLAEQVTKGGQTFTRRLNADRVYHAPGGGTLTLHGRSLMFVRNVGHLMTNPAVLDADGNEIPEGILDAVVTTLAALPDRASRRNSRAGSIYIVKPKMHGPAEAAFANELFDRVEDLLGLPRHTVKMGIMDEERRTSVNLKACIQAAAGRVAFINTGFLDRTGDEMHSSMEAGPMMRKGDMKSSAWIAAYERSNVLVGLDCGLRGRAQIGKGMWAMPDLMAAMLEQKIGHPKAGANTAWVPSPTAATLHALHYHQVDVPAVQQQLESTRLASVQDELLDGLLTVPVGNPADWSPDDIRHELENNAQGILGYVVRWIDQGVGCSKVPDINNVGLMEDRATLRISSQHIANWMRHGIATREQVRDTFERMAAVVDRQNAGDPLYQPMAGHFDTSIAFQAACALVFEGLAQPNGYTEPLLHQYRLAFKARHNKG

Annotated regions:
phrase: HRFIQDEALPAGGIDAPRFWAGFAALVRDLAPRNRALLAERDRLQRELDTWHRAHPGPV
type: DOMAIN
name: MS_N
description: Malate synthase, N-terminal domain

phrase: IRHELENNAQGILGYVVRWIDQGVGCSKVPDINNVGLMEDRATLRISSQHIANWMRHGIATREQVRDTFERMAAVVDRQNAGDPLYQPMAGHFD
type: DOMAIN
name: MS_C
description: Malate synthase, C-terminal domain

phrase: YHPQRGQAVIARARAFLDEAVPLAQGSHADATGYSVDNGQLRVALAQGSTGLAQPEQFAGYQGDAQAPQAILLK
type: DOMAIN
name: MSG_insertion
description: Malate synthase G, alpha-beta insertion domain

phrase: MFVRNVGHLMTNPAVLDADGNEIPEGILDAVVTTLAALPDRASRRNSRAGSIYIVKPKMHGPAEAAFANELFDRVEDLLGLPRHTVKMGIMDEERRTSVNLKACIQAAAGRVAFINTGFLDRTGDEMHSSMEAGPMMRKGDMKSSAWIAAYERSNVLVGLDCGLRGRAQIGKGMWAMPDLMAAMLEQKIGHPKAGANTAWVPSPTAATLHALHYHQVDVPAVQQQLESTRLA
type: DOMAIN
name: Malate_synthase_TIM
description: Malate synthase, TIM barrel domain
Protein sequence:
MFCSVDEAIDEIKNGKVIIVVDDEDRENEGDFICAAEYVTPDIVNFMVTHGRGMLCVALNGKRLDELNLPLMVETNSALHGTQFTVTIDAIEGTTTGISAADRAHTIKKLIDPKSTSKDFAKPGHIFPLRAFEEGVLRRAGHTEAAVDLCKLANLNPAGVLCEILKDNGEMARVPELVEIAKKFNLKIVTVQELIKHRIKNENLIEKITDIDFPTDHGRFRLHLYKNLLDKKKQIALVKGEPDPEKPFLVRMHSECLTGDVFHSLRCDCHDQLNHALDLIEQNGSGALVYMRQEGRGIGLENKIKAYRLQDEGRDTVEANEELGFKADLRDYGIGAQILLNLGIKKINLLTNNPKKVIGLNGYGLEIVNRIPIEIPPNKSNEKYLQTKRDKLGHIILQ

Annotated regions:
phrase: ITDIDFPTDHGRFRLHLYKNLLDKKKQIALVKGEPDPEKPFLVRMHSECLTGDVFHSLRCDCHDQLNHALDLIEQNGSGALVYMRQEGRGIGLENKIKAYRLQDEGRDTVEANEELGFKADLRDYGIGAQILLNLGIKKINLLTNNPKKVIGLNGYGLEIVNRI
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MKLVFATNNPNKLSEIKVLVPEGIEILSLHDIDCNEELPETTLTLEGNACQKAMYVFDNYGYNCFADDTGLEIDVLKGEPGVYSARYAGKECKAEDNINLVLKKLDGEANRIAKFRTVIALIIDGSETLFEGECKGEITLGKAGKEGFGYDPIFLPNGFDKTFAEMKQNEKGAISHRGKAVEKLVEFLHR

Annotated regions:
Protein sequence:
MLLWYTTASIMRYLMVFMLFGIQCAAAIIYRGNYISLYVNSSATSIFLKGNNNDASIRGRFLFIGDQFPVTNTYNVTVELLHVNQTTLCLQPLYRVMYGECPRIRTGAIIACRVKRSWHYENATQLTDPNVEIIFKMNNTKVEDAGIYLLVVQLDYTSLFDIFFVSLNVYPKQDTSNEDVNYFPPVYSPSHILNTFKICHKFPVHNGMEQSILQHIVTSDVDTETENLSWQKDDLGSTQKPRKNFNPDVKVNVTHETRKTLMESSADVFMIAVPITASLLVILAIIIVVTVGIYRRRSSEKRKIYRPKRTKEQASTEKRERSESDVLLEAAVARLETIQEENPPHSVINPFTK

Annotated regions:
Protein sequence:
MPVNALTNSFVLGAAGGGVEWGTVIVTVITFAILLALLKKFAWGPLKEVMDKRERDINRDIDEAEEAKLNAQKLEEENKKTLKQTQDEVQRILEDARVQARKQHEEIIHEANIRANGMIETAQSEINSEKERALADINNQVSELSVLIASKVLKKEISEQDQKELVDKYLKEAGDK

Annotated regions:
Protein sequence:
MMVLGRIVAPFGVQGWLKIHPFGDDPAAWRKMTHWWLAEDPDGPESAWVQYKLASCRPHGKGLVALLEGVPDRNAAEAIEGRYVGAPRDAMPAPEKDEYYWGDLVGLDVVNETDETLGRVSGLISTGAHDVLQVEDGETERLIPFVAAYVLDVDLAARRIRVAWQKDW

Annotated regions:
phrase: LGRIVAPFGVQGWLKIHPFGDDPAAWRKMTHWWLAEDPDGPESAWVQYKLASCRPHGKGLVALLEGVPDRNAAEAIEGRYVGAPR
type: DOMAIN
name: RimM_N
description: RimM, N-terminal

phrase: WGDLVGLDVVNETDETLGRVSGLISTGAHDVLQVEDGETERLIPFVAAYVLDVDLAARRIRVAWQKD
type: DOMAIN
name: PRC_RimM
description: Ribosome maturation factor RimM, PRC barrel domain
Protein sequence:
MRGVDVIKENLKHLPSRPGVYRMFGEAGEVLYVGKARDLKARVSNYTRMGGHTQRIARMISLTRAMEFVVTETETEALLLEASLVKSLKPRFNVLLRDDKSFPYILIRRNHEAPQIKKYRGSKQDEGDYFGPFANAGAVMRTLDTLQKAFLLRTCEDSVYSARTRPCMLHQIKRCAAPCVGLVSKEDYTALADEAADFLRGKAGELQKRLASEMEAASEAMEFETAARLRDRIRAIAHVRSTQDVNPDGIEEADVFAIAMDGGVSCVQVFFIRAGQNWGASAHFPRHEKDQTAPEILAAFLVQFYDKRPPPKLILVSEPPDQADLIEEALALKAGRRIELRRPERGTKRDLLTQAERNASEALSRKLAESASQERLLTEVQKVFDLAEAPQRIEVYDNSHIQGTNAVGGMIVAGPEGFRKQAYRKFNIKDTEITPGDDYGMMREVMRRRFARAMKEKVAGNVSDWPDLVLIDGGLGQLNATLETLAELGLTPDDVTLVSIAKGVDRNAGREQFFRPGKAPFKLPENAPVLYYLQRLRDEAHRWAIGAHRQKRAAEAARSPLDEIEGIGPTRKKALLHHFGSARGVSRAKVADLMEVDGVNEALAIRIYGHFNSG

Annotated regions:
phrase: RPGVYRMFGEAGEVLYVGKARDLKARVSNYTRMGGHTQRIARMISLTRAMEFVVTETETEALLLEASLVKSLKPRFNVLLR
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: GELQKRLASEMEAASEAMEFETAARLRDRIRAIAH
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: PGVYRMFGEAGEVLYVGKARDLKARVSNYTRMGGHTQRIARMISLTRAMEFVVTETETEALLLEASLVKSLK
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: LPSRPGVYRMFGEAGEVLYVGKARDLKARVSNYTRMGGHTQRIARMISLTRAMEFVVTETETEALLLEASLVKSLKPRFN
type: DOMAIN
name: GIY-YIG_UvrC_Cho
description: UvrC/Cho-like, GIY-YIG domain

phrase: SRPGVYRMFGEAGEVLYVGKARDLKARVSNYTRMGGHTQRIARMISLTRAMEFVVTETETEALLLEASLVKSLKPRFN
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: VFAIAMDGGVSCVQVFFIRAGQNWGASAHFPRHEKDQTAPEILAAFLVQFYDKRPPPKLILVSEPPDQADLIEEALALKAGRRIELRRPERGTKRDLLTQAERNASEALSRKLAESASQERLLTEVQKVFDLAEAPQRIEVYDNSHIQGTNAVGGMIVAGPEGFRKQAYRKFNIKDTEITPGDDYGMMREVMRRRFARAMKEKVAGNVSDWPDLVLIDGGLGQLNATLET
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: ADLMEVDGVNEALAIRIYG
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: SPLDEIEGIGPTRKKALLH
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: QKVFDLAEAPQRIEVYDNSHIQGTNAVGGMIVAGPEGFRKQAYRKFNIKDTEITPGDDYGMMREVMRRRFARAMKEKVAGNVSDWPDLVLIDGGLGQLNATLETLAELGLTPDDVTLVSIAKGVDRNAGREQFFRPGKAPFKLPENAPVLYYLQRLRDEAHRWA
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: ELQKRLASEMEAASEAMEFETAARLRDRIRA
type: DOMAIN
name: UVR_dom
description: UVR domain
Protein sequence:
MGNRKPELFSSIEEALEEVRQGRMIVIVDDEDRENEGDLMIAAEKVTPQAVNFMAMHGRGLICLALTEKRTHELGLAMMVKDNESHFATPFTISVDARSGVTTGISAADRAQTIQVAIDSASSKYDLVSPGHIFPLRARDGGVLVRMGQTEASVDMARLAGLDPSGVICEIMNDDGTMSRVPQLSRFIQKHQLKMITTKDLAEYRLQRETLIEEAATTLLPTEFGQFRAVVFKNILLDQIHMALVKGEIHPDVPTLVRVHSQCLTGDVFGSFRCDCGEQLQRSLEMIEAEGNGVLLYLFQEGRGIGIINKLRAYALQDEGHDTVQANEALGFKPDLREYGIGAQILRKLNLGKIRLLTNNPRKIVGLEGYGLQMVERVPIEVSPRKDNIKYLKTKQQKLGHLFKNIS

Annotated regions:
phrase: ATTLLPTEFGQFRAVVFKNILLDQIHMALVKGEIHPDVPTLVRVHSQCLTGDVFGSFRCDCGEQLQRSLEMIEAEGNGVLLYLFQEGRGIGIINKLRAYALQDEGHDTVQANEALGFKPDLREYGIGAQILRKLNLGKIRLLTNNPRKIVGLEGYGLQMVERV
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MATKYIFVTGGVTSSLGKGITSSSLGRLLKSRGLKVSIQKFDPYINVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFIDENLSKNSNVTTGKIYWSVIQKERKGEYLGGTVQVIPHITNEIKQRVYRVAKERDVDVVITEIGGTVGDIESLPFLEAIRQIKYEVGRENVCFIHVTLVPYLSKAGELKTKPTQHSVKDLRGIGIQPDIIVCRSEKPLSAELKDKIGLFCNIDGESVIQNLDAETLYEVPLLLKEEGLDDLVVKKLHLNCGEAQLDEWKDMVNRLKNLKENVKIALVGKYVELHDAYLSVVEALKHAGISNDAEVEIEWINSCEVDENNYKDILKGCDGILVPGGFGDRGIEGKILAIRYARENNVPFLGICLGMQCAVIEFARNVLGLSGANSSEIDPETKYPVIDLMPEQKDIDEKGGTMRLGLYPCKLKEGTFSYEAYNDKVIYERHRHRYEFNNEFRSQFAAEGMIFAGTSPDDRLVEIVEIQNHKWFVGVQFHPEFKSRPNRSHPLFRDFIAAALKNRKCK

Annotated regions:
phrase: LHDAYLSVVEALKHAGISNDAEVEIEWINSCEVDENNYKDILKGCDGILVPGGFGDRGIEGKILAIRYARENNVPFLGICLGMQCAVIEFARNVLGLSGANSSEIDPETKYPVIDLMPEQKDIDEKGGTMRLGLYPCKLKEGTFSYEAYNDKVIYERHRHRYEFNNEFRSQFAAEGMIFAGTSPDDRLVEIVEIQNHKWFVGVQFHPEFKSRPNRSHPLFRDFI
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: KYIFVTGGVTSSLGKGITSSSLGRLLKSRGLKVSIQKFDPYINVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFIDENLSKNSNVTTGKIYWSVIQKERKGEYLGGTVQVIPHITNEIKQRVYRVAKERDVDVVITEIGGTVGDIESLPFLEAIRQIKYEVGRENVCFIHVTLVPYLSKAGELKTKPTQHSVKDLRGIGIQPDIIVCRSEKPLSAELKDKIGLFCNIDGESVIQNLDAETLYEVPLLLKEEGLDDLVV
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: VKIALVGKYVELHDAYLSVVEALKHAGISNDAEVEIEWINSCEVDENNYKDILKGCDGILVPGGFGDRGIEGKILAIRYARENNVPFLGICLGMQCAVIEFARNVLGLSGANSSEIDPETKYPVIDLMPEQKDIDEKGGTMRLGLYPCKLKEGTFSYEAYNDKVIYERHRHRYEFNNEFRSQFAAEGMIFAGTSPDDRLVEIVEIQNHKWFVGVQFHPEFKSRPNRSHPLFRDF
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain

phrase: KYIFVTGGVTSSLGKGITSSSLGRLLKSRGLKVSIQKFDPYINVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFIDENLSKNSNVTTGKIYWSVIQKERKGEYLGGTVQVIPHITNEIKQRVYRVAKERDVDVVITEIGGTVGDIESLPFLEAIRQIKYEVGRENVCFIHVTLVPYLSKAGELKTKPTQHSVKDLRGIGIQPDIIVCRSEKPLSAELKDKIGLFCNIDGESVIQNLDAETLYEVPLLLKEEGLDDLVVKKLH
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal
Protein sequence:
MELAKGFLFSGLNCGIKRYRKDLGIAYSTFDCVAAGLFTTNTVKAAPILYNMKLLGENCTKIRAVVVNSKIANSCTGQQGLNNAYRMAQKAAQALQIDRRSVLLASTGIIGLQLPMDKIEAGIEEASNLLSEDPTPFAEAITTTDTFIKMSSRSFEIDGTRVSILGIAKGSGMIHPNIATMLAFIFTDANISPEALKKALKDSVEKSYNMIDVDGDTSTNDMVLALANGCAGNERIEEGSAGFLKFFENLHEINVELAKMIVKDGEGATKLIEVRVVHAPDELSARRIARSIVSSNLVKTAIHAQDPNWGRIVAAAGYSGVDFDPDKLDLHITDGKNVITVLKRGYPCEFSEEEANRIFLASEIVLTVDLNDGVHSATAWGCDLSEEYIKKNGRYKVWVRTL

Annotated regions:
Protein sequence:
MRVAIVGASGAVGQEFLRILAQREFPMDDLVLFGSERSAGKKYSFKGKEYTVKLLQHNDDFRDIDVAFVSAGGGTSKDFAETITKHGAVMIDNSSAFRMDEDVPLVVPEVNAADALNRPRGIIANPNCTTIMMVVALKPIEDLSHIKKIHISSYQSASGAGAVAMQELEQQYREILSTGEVKTIKKFPHQLAYNVIPQIDVMTPNDYTKEEMKMYHETRKIMHSDVRTSATCVRVSSLRSHSESVWFETERPLSVEEIREALQAAPGVTLKDDPQNYVYPMPLESAGQDDVYVGRVRKDLADDNSCTLWLTGDQIRKGAALNAVQIAEYLVSVGDLK

Annotated regions:
phrase: RVAIVGASGAVGQEFLRILAQREFPMDDLVLFGSERSAGKKYSFKGKEYTVKLLQHNDDFRDIDVAFVSAGGGTSKDFAETITKHGAVMIDNSSAFRMDEDVPLVVPEVNAA
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: LKPIEDLSHIKKIHISSYQSASGAGAVAMQELEQQYREILSTGEVKTIKKFPHQLAYNVIPQIDVMTPNDYTKEEMKMYHETRKIMHSDVRTSATCVRVSSLRSHSESVWFETERPLSVEEIREALQAAPGVTLKDDPQNYVYPMPLESAGQDDVYVGRVRKDLADDNSCTLWLTGDQIR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: RVAIVGASGAVGQEFLRILAQREFPMDDLVLFGSERSAGKKYSFKGKEYTVKLLQHNDDFRDIDVAFVSAGGGTSKDFAETITKHGAVMIDNSSAFRMDEDVPLVVPEVNAADALN
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MVSTDLPPLIELRGIRKRYGGGDKPEVEVLHGIDLDIRAGEFIAIVGSSGSGKSTLMHLLGCLDRPSSGSYRFAGEDVSTFGSDELAWLRRKAFGFVFQGYHLIPTESARENVEIPAIYAGLPPGERMQRAADLLGRLGLSDKLNNRPNQLSGGQQQRVSIARALMNGGHIILADEPTGALDSRSGAEVMELLRELAGAGHTVILITHDRDVAAQAQRVVEIRDGRIVADSVTDRQPSEQPLLHHAGLSSLEMTQAHEDTGTPFWQGLHETIRAAWRVMWIHRVRTSLTLLGIVIGVASVIVMLAIGEGTKQRVIDQMGSMGTTIMYMSSDVPSTGGPVGVITEEDLDEVARLPEISRVMPVIGDPILVRHQNVDKQIYVFSSPYIMPMVHHWRVAQGRFFTETEDRELAPVVVLGHKIYRSFFPHLSNPVGQYLLIGTSPFEVIGVMAERGAESGSQNYDDMVFIPYRAGRARVYQAQEQPDYIVMEAASMDQVQEAEEAIRALLLERHGREDFRIGNAAARLKTQLETRDTMTRMLGLVAAVSLLVGGIGVMNVMLMTVRERTREIGIRMATGAREYDILSQFLIEAMLVTITGGTVGVILGLTVGALLVFWEVPVVFSFGVMIGAFACAVITGLIFGYMPARTAARLDPVVALSSE

Annotated regions:
phrase: LVAAVSLLVGGIGVMNVMLMTVRERTREIGIRMATGAREYDILSQFLIEAMLVTITGGTVGVILGLTVGALLVFWEVPVVFSFGVMIGAFACAVITGLIFGYMPARTAARLD
type: DOMAIN
name: ABC3_permease_C
description: ABC3 transporter permease, C-terminal

phrase: TSLTLLGIVIGVASVIVMLAIGEGTKQRVIDQMGSMGTTIMYMSSDVPSTGGPVGVITEEDLDEVARLPEISRVMPVIGDPILVRHQNVDKQIYVFSSPYIMPMVHHWRVAQGRFFTETEDRELAPVVVLGHKIYRSFFPHLSNPVGQYLLIGTSPFEVIGVMAERGAESGSQNYDDMVFIPYRAGRARVYQAQEQPDYIVMEAASMDQVQEAEEAIRA
type: DOMAIN
name: MacB_PCD
description: MacB-like periplasmic core domain

phrase: AGEFIAIVGSSGSGKSTLMHLLGCLDRPSSGSYRFAGEDVSTFGSDELAWLRRKAFGFVFQGYHLIPTESARENVEIPAIYAGLPPGERMQRAADLLGRLGLSDKLNNRPNQLSGGQQQRVSIARALMNGGHIILADEPTGALDSRSGAEVMELLRELAGAGHTVILITHDRDVAAQAQRVVEIRDG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LSGGQQQRVSIARA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: IELRGIRKRYGGGDKPEVEVLHGIDLDIRAGEFIAIVGSSGSGKSTLMHLLGCLDRPSSGSYRFAGEDVSTFGSDELAWLRRKAFGFVFQGYHLIPTESARENVEIPAIYAGLPPGERMQRAADLLGRLGLSDKLNNRPNQLSGGQQQRVSIARALMNGGHIILADEPTGALDSRSGAEVMELLRELAGAGHTVILITHDRDVAAQAQRVVEIRDGRIVADSVTDRQPSEQPLLHHAGL
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: LHGIDLDIRAGEFIAIVGSSGSGKSTLMHLLGCLDRPSSGSYRFAGEDVSTFGSDELAWLRRKAFGFVFQGYHLIPTESARENVEIPAIYAGLPPGERMQRAADLLGRLGLSDKLNNRPNQLSGGQQQRVSIARALMNGGHIILADEP
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: IELRGIRKRYGGGDKPEVEVLHGIDLDIRAGEFIAIVGSSGSGKSTLMHLLGCLDRPSSGSYRFAGEDVSTFGSDELAWLRRKAFGFVFQGYHLIPTESARENVEIPAIYAGLPPGERMQRAADLLGRLGLSDKLNNRPNQLSGGQQQRVSIARALMNGGHIILADEPTGALDSRSGAEVMELLRELAGAGHTVILITHDRDVAAQAQRVVEIRDGR
type: DOMAIN
name: MacB-like_ATP-bd
description: MacB-like, ATP-binding domain
Protein sequence:
MDFVSRPTTETAKALLGVKVIYEDEFQTYSGYIVETEAYLGFTDRAAHGFGGKQTPKVTSLYKRGGTIYGHVMHTHLLVNFVTQNEGVPEGVLIRAIEPLDGIEMMKHNRNKSGYELTNGPGKWTKAFNIPRAIDGATLNDCRLSIDTKHRKYPRDIVESARIGIPNKGDWTNKPLRYTVKGNPFVSHIRKSDCLNPDETWK

Annotated regions:
Protein sequence:
WFNDLKQQCRAEMISIIDVTCQAIKHANTTRVGLLATTATVKARIYQDNLITDNIDCYTPDDADQHQVMESIYAYKSGDIAGAYSLLSPVKDRLLQAGVEKIILGCTELPLILEQEVRTSPQHYVDATEELIKKTVEWYFTHNTRNNIAA

Annotated regions:
phrase: IILGCTELPL
type: ACTIVE_SITE
name: Asp/Glu_racemase_AS_2
description: Asp/Glu racemase, active site 2
Protein sequence:
MVNLRNAVHSFLVHLIGLLVWQCDISVSPVAAIVTDIFNTSDGGRFKFPDGVQNWPALSIVVIIIMTIGGNILVIMAVSMEKKLHNATNYFLMSLAIADMLVGLLVMPLSLLAILYDYVWPLPRYLCPVWISLDVLFSTASIMHLCAISLDRYVAIRNPIEHSRFNSRTKAIMKIAIVWAISIGVSVPIPVIGLRDERKVFVNNTTCVLNDPNFVLIGSFVAFFIPLTIMVITYCLTIYVLRRQALMLLHGHTEEPPGLSLDFLKCCKRNTAEEENSANPNQDQNARRRKKKERRPRGTMQAINNERKASKVLGIVFFVFLIMWCPFFITNILSVLCEKSCNQKLMEKLLNVFVWIGYVCSGINPLVYTLFNKIYRRAFSNYLRCNYKVEKKPPVRQIPRVAATALSGRELNVNIYRHTNEPVIEKASDNEPGIEMQVENLELPVNPSSVVSERISSV

Annotated regions:
phrase: GNILVIMAVSMEKKLHNATNYFLMSLAIADMLVGLLVMPLSLLAILYDYVWPLPRYLCPVWISLDVLFSTASIMHLCAISLDRYVAIRNPIEHSRFNSRTKAIMKIAIVWAISIGVSVPIPVIGLRDERKVFVNNTTCVLNDPNFVLIGSFVAFFIPLTIMVITYCLTIYVLRRQALMLLHGHTEEPPGLSLDFLKCCKRNTAEEENSANPNQDQNARRRKKKERRPRGTMQAINNERKASKVLGIVFFVFLIMWCPFFITNILSVLCEKSCNQKLMEKLLNVFVWIGYVCSGINPLV
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM
Protein sequence:
MIYENSKSFAEQLDQNDPLRSYREKFHYPKNENGKDVIYLCGNSLGLQPKSVRSFVEKELFVWGKEGVMGQHGRWEKFHERLTQSSAKLVGAKPSEVVVMNALTVNIHLLLISFYQPTEKRKKIMIEKGAFPSDQYAVESQIKLHGFDPNECLIELGPRVGETTLRTEDILQSITKTGDELATIIIGGVNYYTGQAFDMQAIAKAGQSVGAYVGFDLAHAAGNLLLELHEWNVDFAAWCTYKYLCAGPGAPSGVFIHVRHHDWSGSRLAGWWGQNKQTRFDMGPEFDPIQTAEGWQISNAPVMGMAPLLASMEIFEDVGMVEIREKGDKLTGFLEFLLKENFPQVSIITPEDRGCQLSLVIPGGRSIFETISEKGVVCDWREPDVIRVAPHPLFNTFSEVFRFVKILQKSL

Annotated regions: