Protein sequence:
MGARASVLSGGKLDAWEKIRLRPGGKKKYRLKHLVWASRELERFALNPGLLETGEGCQQIMEQLQSTLKTGSEEIKSLYNTVATLYCVHQRIDVKDTKEALDKIEEIQNKSRQKTQQAAAAQQAAAATKNSSSVSQNYPIVQNAQGQMIHQAISPRTLNAWVKVIEEKAFSPEVIPMFSALSEGATPQDLNMMLNIVGGHQAAMQMLKDTINEEAADWDRVHPVHAGPIPPGQMREPRGSDIAGTTSTLQEQIGWMTSNPPIPVGDIYKRWIILGLNKIVRMYSPVSILDIRQGPKEPFRDYVDRFFKTLRAEQATQEVKNWMTETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPSHKARVLAEAMSQATNSTAAIMMQRGNFKGQKRIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQANFLRENLAFPQGKAREFPSEQTRANSPTSRELRVWGGDKTLSETGAERQGIVSFSFPQITLWQRPVVTVRVGGQLKEALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVRQYDQILIEICGKKAIGTILVGPTPVNIIGRNMLTQIGCTLNFPISPIETVPVKLKPGMDGPRVKQWPLTEEKIKALTEICKDMEKEGKILKIGPENPYNTPVFAIKKKDSTKWRKLVNFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRTKNPEIVIYQYMDDLYVGSDLEIGQHRTKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKESWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGAKALTDIVPLTAEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEQYKNLKTGKYARIKSAHTNDVKQLTEAVQKIAQESIVIWGKTPKFRLPIQKETWEAWWTEYWQATWIPEWEFVNTPPLVKLWYQLETEPIVGAETFYVDGAANRETKKGKAGYVTDRGRQKVVSLTETTNQKTELQAIHLALQDSGSEVNIVTDSQYALGIIQAQPDKSESEIVNQIIEQLIQKDKVYLSWVPAHKGIGGNEQVDKLVSSGIRKVLFLDGIDKAQEEHEKYHSNWRAMASDFNLPPIVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKIIIVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVKVVHTDNGSNFTSAAVKAACWWANIKQEFGIPYNPQSQGVVESMNKELKKIIGQVREQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDMIATDIQTKELQKQITKIQNFRVYYRDNRDPIWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVAGGQDED

Annotated regions:
phrase: AQEEHEKYHSNWRAMASDFNLPPIVAKEIVASCDKC
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: VYYRDNRDPIWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKI
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: SPGIWQLDCTHLEGKIIIVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVKVVHTDNGSNFTSAAVKAACWWANIKQEFGIPYN
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: FRVYYRDNRDPIWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIR
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: CWKCGKEGHQMKDCT
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: IVGAETFYVDGAANRETKKGKAGYVTDRGRQKVVSLTETTNQKTELQAIHLALQDSGSEVNIVTDSQYALGIIQAQPDKSESEIVNQIIEQLIQKDKVYLSWVPAHKGIGGNEQVDKLVSSGI
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: EGKILKIGPENPYNTPVFAIKKKDSTKWRKLVNFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRTKNPEIVIYQYMDDLYVGSDLEIGQHRTKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYE
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: VTVRVGGQLKEALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVRQYDQILIEICGKKAIGTILVGPTPVNIIGRNML
type: DOMAIN
name: Retropepsin-like_cat_dom
description: Retropepsin-like catalytic domain

phrase: GARASVLSGGKLDAWEKIRLRPGGKKKYRLKHLVWASRELERFALNPGLLETGEGCQQIMEQLQSTLKTGSEEIKSLYNTVATLYCVHQRIDVKDTKEALDKIEEIQNKSRQKTQQAAAAQQAAAATKNSSSVSQN
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: VDCSPGIWQLDCTHLEGKIIIVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVKVVHTDNGSNFTSAAVKAACWWANIKQEFGIPYNPQSQGVVESMNKELKKIIGQVREQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDM
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: RASVLSGGKLDAWEKI
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: RPGGKKKYRLKHLVWASR
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: ERFALNPGLLETGEG
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: TGSEEIKSLYNTVATLYCV
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: HQRIDVKDTKEAL
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: VQPIQLPDKESWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGAKALTDIVPLTAEAELE
type: DOMAIN
name: RVT_thumb
description: Reverse transcriptase thumb

phrase: ETFYVDGAANRETKKGKAGYVTDRGRQKVVSLTETTNQKTELQAIHLALQDSGSEVNIVTDSQYALGIIQAQPDKSESEIVNQIIEQLIQKDKVYLSWVPAHKGIGGNEQVDKLVSSG
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: KCFNCGKEGHLARNC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: DGIDKAQEEHEKYHSNWRAMASDFNLPPIVAKEIVASCDKC
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: IKKKDSTKWRKLVNFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRTKNPEIVIYQYMDDLYVGSDLEIGQHRTKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYE
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: KCFNCGKEGHLARNCR
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: GCWKCGKEGHQMKDCT
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: YSPVSILDIRQGPKEPFRDYVDRFFKTLRAEQATQEVKNWMTETLLVQNANPDCKTILKALGPGATLEEMMT
type: DOMAIN
name: Gag_p24_C
description: Retroviral nucleocapsid Gag protein p24, C-terminal domain

phrase: KEALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVRQYDQILIEICGKKAIGTILVGPTPVNIIGRN
type: DOMAIN
name: Peptidase_A2_cat
description: Peptidase A2A, retrovirus, catalytic

phrase: ALLDTGADDTV
type: ACTIVE_SITE
name: Aspartic_peptidase_AS
description: Aspartic peptidase, active site

phrase: YYDPSKDLIAEIQKQGQGQWTYQIYQEQYKNLKTGKYARIKSAHTNDVKQLTEAVQKIAQESIVIWGKTPKFRLPIQKETWEAWWTEYWQATWIPEWEFVN
type: DOMAIN
name: RVT_connect
description: Reverse transcriptase connection

phrase: IKCFNCGKEGHLARNC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: GCWKCGKEGHQMKDCT
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: WQRPVVTVRVGGQLKEALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVRQYDQILIEICGKKAIGTILVGPTPVNIIGRNMLTQIGCT
type: DOMAIN
name: Retropepsins
description: Retropepsins