nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSTNQETRGFQSEVKQLLQLMIHSLYSNKEIFLRELISNASDAADKLRFKALSAPELYEGDGDLKVRISFDAEKGTLTISDNGIGMTREQVIDHLGTIAKSGTKEFLAALGQEQAKDSQLIGQFGVGFYSAFIVADKVTVKTRAAGEPIDRAVLWESAGEGEYSVADIEKRERGTEITLHLREEEKEFANEWRVREIIGKYSDHIGLPVEILAKEYDEEGKETGIKWEKINKAQALWTRSKGEISDEEYKEFYKHLSHDFADPLLWTHNKVEGNQEYTSLLYVPSKAPWDLFNREHKHGLKLYVQRVFIMDDAEQFMPNYLRFMRGLIDSNDLPLNVSREILQDNKVTAALRKALTKRSLQMLEKLAKDDEEKYLQFWKEFGLVLKEGPSEDFANKENIAKLLRFASSKNDSSEQTVSLEDYVARMKEGQKAIYYITADSYIAAKNSPHLELFNKKDIEVLLLSDRIDEWMLSYLTEFDGKQLQPITKADLDLGDLADKEQEEQKEQDKTFSSFIERVKTLLGERVKDVRLTHRLTDTPAVVSTDNDQMTTQMAKLFAAAGQPVPEVKYTFELNPEHHLVKKVADFADEDEFANWIELLLEQAMLAERGSLENPTAFIKRVNNLLG

Annotated regions:
phrase: NKEIFLRELISNASDAADKLRFKALSAPELYEGDGDLKVRISFDAEKGTLTISDNGIGMTREQVIDHLGTIAKSGTKEFLAALGQEQAKDSQLIGQFGVGFYSAFIVADKVTVKTRAAGEPIDRAVLWESAGEGEYSVADIEKRERGTEITLHLREE
type: DOMAIN
name: HATPase_dom
description: Histidine kinase/HSP90-like ATPase domain

phrase: ETRGFQSEVKQLLQLMIHSL
type: DOMAIN
name: Hsp90_N
description: Heat shock protein Hsp90, N-terminal

phrase: SNKEIFLRELISNASDAADKLR
type: DOMAIN
name: Hsp90_N
description: Heat shock protein Hsp90, N-terminal

phrase: TLTISDNGIGMTREQVI
type: DOMAIN
name: Hsp90_N
description: Heat shock protein Hsp90, N-terminal

phrase: HLGTIAKSGTKEFLAAL
type: DOMAIN
name: Hsp90_N
description: Heat shock protein Hsp90, N-terminal

phrase: IGQFGVGFYSAFIVADKVTVKT
type: DOMAIN
name: Hsp90_N
description: Heat shock protein Hsp90, N-terminal

phrase: RGTEITLHLREEEKEFA
type: DOMAIN
name: Hsp90_N
description: Heat shock protein Hsp90, N-terminal

phrase: EWRVREIIGKYSDHIGLP
type: DOMAIN
name: Hsp90_N
description: Heat shock protein Hsp90, N-terminal

phrase: KQLLQLMIHSLYSNKEIFLRELISNASDAADKLRFKALSAPELYEGDGDLKVRISFDAEKGTLTISDNGIGMTREQVIDHLGTIAKSGTKEFLAALGQEQAKDSQLIGQFGVGFYSAFIVADKVTVKTRAAGEPIDRAVLWESAGEGEYSVADIEKRERGTEITLHLREEEKEFANEWRVREIIGKYSDH
type: DOMAIN
name: Hsp90_N
description: Heat shock protein Hsp90, N-terminal

phrase: YSNKEIFLR
type: CONSERVED_SITE
name: Heat_shock_protein_90_CS
description: Heat shock protein Hsp90, conserved site
Protein sequence:
MLPSLIQPCSSGTLLMLLMSNLFLWEKVSSAPINASEAVLSDLKDLFDNATVLSGEMSKLGVIMRKEFFMNSFSSETFNKIILDLHKSTENITKAFNSCHTVPINVPETVEDVRKTSFEEFLKMVLHMLLAWKEPLKHLVTELSALPECPYRILSKAEAIEAKNKDLLEYIIRIISKVNPAIKENEDYPTWSDLDSLKSADKETQFFALYMFSFCLRIDLETVDFLVNFLKCLLLYDDVCYSEF

Annotated regions:
phrase: CHTVPINVPETVEDVRKTSFEEFLKMVLHMLLA
type: CONSERVED_SITE
name: Somatotropin_CS
description: Somatotropin hormone, conserved site

phrase: CLRIDLETVDFLVNFLK
type: CONSERVED_SITE
name: Somatotropin_CS
description: Somatotropin hormone, conserved site
Protein sequence:
MEQFDGFEYSKRDLLGHGAFAIVYRGRYVDRTDVPVAIKAIAKKNISKSKNLLTKEIKILKELSSLKHENLVGLLKCTETPTHVYLVMEFCNGGDLADYLQQKTTLNEDTIQHFVVQIAHALEAINKKGIVHRDLKPQNILLCNNSRTQNPHFTDIVIKLADFGFARFLNDGVMAATLCGSPMYMAPEVIMSMQYDAKADLWSIGTILFQCLTGKAPFVAQTPPQLKAYYEKTRELRPNIPEWCSPNLRDLLLRLLKRNAKDRISFEDFFNHPFLTSPLLPSPSKRILESARSPLLANRRIITPQSSLPVPKRAGSTKLDSPTPVRRIGESPRVQRRVITPGMPSPVPGAPMQESTDFTFLPPRQESSPVKQVQVHTNVSPSLTTCKPVPVPSQRLTYQKMEERLAAARKTAVPSSSSPTGSAVSAQHQHQHQQQQEPASSPVVQRIERPDQLPRRTTLQDPNAHDIERMTMPNPTFVVCGSSTKPSPNNANRVRRSTITSPADTQDMVAADQMLSNLDPTTTTTTIPKSATTANIQGIPRGARDRSVTSPPQPTIHENEPLDNAKYQQTDVNNSPTAPTEPFIIKNQTTCSTSSTSSSVVEEEEAMSLPFASGSHLAAGFKKTPAEVPMDHGALPPALDQEIVLGEEHKQILAKLRFVAELVDTLIHVAEQKDNPLASAMASRRQLLTTGTSTTNTSSPYRRAEQLVVYVRALHMLSSALLLAQTNVANRVLHPSVAVQQVLNQLNDKYHQCLVRSQELASLGLPGQDPAMAVISAERIMYRHAIELCQAAALDELFGNPQLCSQRYQTAYMMLHTLAEQVNCDQDKTVLTRYKVAVEKRLRILERQGFVAAVNT

Annotated regions:
phrase: IVHRDLKPQNIL
type: ACTIVE_SITE
name: Ser/Thr_kinase_AS
description: Serine/threonine-protein kinase, active site

phrase: ILAKLRFVAELVDTLIHVAEQKDNPLASAMASRRQLLTTGTSTTNTSSPYRRAEQLVVYVRALHMLSSALLLAQTNVANRVLHPSVAVQQVLNQLNDKYHQCLVRS
type: DOMAIN
name: Atg1-like_tMIT
description: Serine/threonine-protein kinase Atg1-like, tMIT domain

phrase: LGHGAFAIVYRGRYVDRTDVPVAIKAIAK
type: BINDING_SITE
name: Protein_kinase_ATP_BS
description: Protein kinase, ATP binding site

phrase: YSKRDLLGHGAFAIVYRGRYVDRTDVPVAIKAIAKKNISKSKNLLTKEIKILKELSSLKHENLVGLLKCTETPTHVYLVMEFCNGGDLADYLQQKTTLNEDTIQHFVVQIAHALEAINKKGIVHRDLKPQNILLCNNSRTQNPHFTDIVIKLADFGFARFLNDGVMAATLCGSPMYMAPEVIMSMQYDAKADLWSIGTILFQCLTGKAPFVAQTPPQLKAYYEKTRELRPNIPEWCSPNLRDLLLRLLKRNAKDRISFEDFFNHPF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: YSKRDLLGHGAFAIVYRGRYVDRTDVPVAIKAIAKKNISKSKNLLTKEIKILKELSSLKHENLVGLLKCTETPTHVYLVMEFCNGGDLADYLQQKTTLNEDTIQHFVVQIAHALEAINKKGIVHRDLKPQNILLCNNSRTQNPHFTDIVIKLADFGFARFLNDGVMAATLCGSPMYMAPEVIMSMQYDAKADLWSIGTILFQCLTGKAPFVAQTPPQLKAYYEKTRELRPNIPEWCSPNLRDLLLRLLKRNAKDRISFEDFFNHPF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: VISAERIMYRHAIELCQAAALDELFGNPQLCSQRYQTAYMMLHTLAEQVNCDQDKT
type: DOMAIN
name: ATG1-like_MIT2
description: ATG1-like, MIT domain 2

phrase: YSKRDLLGHGAFAIVYRGRYVDRTDVPVAIKAIAKKNISKSKNLLTKEIKILKELSSLKHENLVGLLKCTETPTHVYLVMEFCNGGDLADYLQQKTTLNEDTIQHFVVQIAHALEAINKKGIVHRDLKPQNILLCNNSRTQNPHFTDIVIKLADFGFARFLNDGVMAATLCGSPMYMAPEVIMSMQYDAKADLWSIGTILFQCLTGKAPFVAQTPPQLKAYYEKTRELRPNIPEWCSPNLRDLLLRLLKRNAKDRISFEDFFNHPF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain
Protein sequence:
MAVITKIEVQKRSKERFNIYIDKGQGEEYGFSVDQVILIKHGLQKGLEIDEIELGNILYNEEVQKAYLQAISYLSYQMRTKQEIEDFLRKKEVGQAIISEVVSKLLHDRYINDKEYAVLYTRTQSNVNRKGPTVIKRELLNKGVQDLIITHSLQEYPKEKQIENALFLIEKKKKSYQKHSFLQMKLKLDEMLVRKGYSREVIQICLEELKDEKDDEKQQEALHYHGNKYYEKYKKHDGWTFENKMKQALYRKGFSIDEIEIFLQMKREEE

Annotated regions:
phrase: AYLQAISYLSYQMRTKQEIEDFLRKKEVGQAIISEVVSK
type: DOMAIN
name: RecX_HTH_1st
description: RecX, first three-helical domain

phrase: KQIENALFLIEKKKKSYQKHSFLQMKLKLDEMLVRKGYSREVIQIC
type: DOMAIN
name: RecX_HTH_3rd
description: RecX, third three-helical domain

phrase: KQQEALHYHGNKYYEKYKKHDGWTFENKMKQALYRKGFSIDEIEI
type: DOMAIN
name: RecX_HTH_3rd
description: RecX, third three-helical domain

phrase: NDKEYAVLYTRTQSNVNRKGPTVIKRELLNKGVQDLII
type: DOMAIN
name: RecX_HTH_2nd
description: RecX, second three-helical domain
Protein sequence:
MAELGEADEAELQRLVAAEQQKAQFTAQVHHFMELCWDKCVEKPGSRLDSRTENCLSSCVDRFIDTTLAITGRFAQIVQKGGQ

Annotated regions:
phrase: VAAEQQKAQFTAQVHHFMELCWDKCVEKPGSRLDSRTENCLSSCVDRFIDTTLAITGRFA
type: DOMAIN
name: Tim10-like
description: Tim10-like
Protein sequence:
MSKMTVEVVTPERVVYSGQAEMVIARGLQGEIGIMPNHMPLVTPLKTAPVRIKTEGDKEVKMAVSGGFMEVRGDKVTILAETAELPGDIDVERAKAARERAEKRLTEKYAELDVKRAERALQRAMARLDVSK

Annotated regions:
phrase: DIDVERAKAARERAEKRLTEKYAELDVKRAERALQRAMARLDVS
type: DOMAIN
name: ATP_synth_F1_esu_C
description: ATP synthase epsilon subunit, C-terminal domain

phrase: MTVEVVTPERVVYSGQAEMVIARGLQGEIGIMPNHMPLVTPLKTAPVRIKTEGDKEVKMAVSGGFMEVRGDKVTILAET
type: DOMAIN
name: ATP_synth_F1_dsu/esu_N
description: ATP synthase, F1 complex, delta/epsilon subunit, N-terminal
Protein sequence:
MNSFAVFGNPIRHSKSAEIYALFAHEIGISKEYNLKLAVQDNFNYLLHNFFKLGGLGANITSPFKENAYFLCNQLTERAEKARSVNTIKKLKNGTLLGDNTDGIGFISDLKRLNWLDNNNQIISNDAPIPMVTNILLIGAGGAAKGIVPILLTTITTCHINIVNRTFSRAQELTSYYQEIGYKNISCLPLYKLRYDTNKYSLIINATTSNIHNTIPKIPYFLITPDTKCYDLFYTKQDTLFITWCKKNGANYCADGLGMLVGQAAHSFLLWHNTFPTINPVIDHLRSAFYM

Annotated regions:
phrase: TNILLIGAGGAAKGIVPILLTTITTCHINIVNRTFSRAQELTSYYQEIGYKNISCLPLYKLRYDTNKYSLIINATTS
type: DOMAIN
name: Shikm_DH/Glu-tRNA_Rdtase
description: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase

phrase: VFGNPIRHSKSAEIYALFAHEIGISKEYNLKLAVQDNFNYLLHNFFKLGGLGANITSPFKENAYFLCNQLTERAEKARSVNT
type: DOMAIN
name: Shikimate_DH-bd_N
description: Shikimate dehydrogenase substrate binding, N-terminal
Protein sequence:
MFLFLFFLVAILPVNTEGGEIIWGTESKPHSRPYMASLMFYYGNSYRHYCGGFLVAKDIVMTAAHCNGSNIKVTLGAHNIKKQEKTQVIAVVKAKPHENYDRHSRFNDIMLLKLERKAQLNGAVKTIALPRSQDWVKPGQVCTVAGWGCLANCSLSNTLQEVNLEVQEGQKCEDMSRNYNDSIQLCVGNPSEGKATGKGDSGGPFVCDGVAQGIVSYRLCTGTLPRVFTRISSFIPWIQKTMKLLQQS

Annotated regions:
phrase: EIIWGTESKPHSRPYMASLMFYYGNSYRHYCGGFLVAKDIVMTAAHCNGSNIKVTLGAHNIKKQEKTQVIAVVKAKPHENYDRHSRFNDIMLLKLERKAQLNGAVKTIALPRSQDWVKPGQVCTVAGWGCLANCSLSNTLQEVNLEVQEGQKCEDMSRNYNDSIQLCVGNPSEGKATGKGDSGGPFVCDGVAQGIVSYRLCTGTLPRVFTRISSFIPW
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain

phrase: IIWGTESKPHSRPYMASLMFYYGNSYRHYCGGFLVAKDIVMTAAHCNGSNIKVTLGAHNIKKQEKTQVIAVVKAKPHENYDRHSRFNDIMLLKLERKAQLNGAVKTIALPRSQDWVKPGQVCTVAGWGCLANCSLSNTLQEVNLEVQEGQKCEDMSRNYNDSIQLCVGNPSEGKATGKGDSGGPFVCDGVAQGIVSYRLCTGTLPRVFTRISSFIPW
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain

phrase: ATGKGDSGGPF
type: ACTIVE_SITE
name: TRYPSIN_SER
description: Serine proteases, trypsin family, serine active site

phrase: IIWGTESKPHSRPYMASLMFYYGNSYRHYCGGFLVAKDIVMTAAHCNGSNIKVTLGAHNIKKQEKTQVIAVVKAKPHENYDRHSRFNDIMLLKLERKAQLNGAVKTIALPRSQDWVKPGQVCTVAGWGCLANCSLSNTLQEVNLEVQEGQKCEDMSRNYNDSIQLCVGNPSEGKATGKGDSGGPFVCDGVAQGIVSYRLCTGTLPRVFTRISSFIPWIQK
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain

phrase: MTAAH
type: ACTIVE_SITE
name: TRYPSIN_HIS
description: Serine proteases, trypsin family, histidine active site

phrase: IIWGTESKPHSRPYMASLMFYYGNSYRHYCGGFLVAKDIVMTAAHCNGSNIKVTLGAHNIKKQEKTQVIAVVKAKPHENYDRHSRFNDIMLLKLERKAQLNGAVKTIALPRSQDWVKPGQVCTVAGWGCLANCSLSNTLQEVNLEVQEGQKCEDMSRNYNDSIQLCVGNPSEGKATGKGDSGGPFVCDGVAQGIVSYRLCTGTLPRVFTRISSFIPWIQKTM
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain
Protein sequence:
MDEIINKYQAVEKLFKEIQEGLAAYDQYKTLISELLHYNNHIKQEYFNFLMIISPYLIRAHSGETLRNKVNNEIKRLILVENINTKISKTLVSVNFLLQKKLSVDGVKTKNMWCTNNPMLQVKTAHNLFKQLCDTQSKTQWVQTLKYKECKYCHTDMVFNTTQFGLQCPNCGCIQELMGTIFDETHFYNHDGQKAKSGIFNPNRHYRFWIEHILGRNSEQELGTKQDPCGTKVLQQLKKIIKRDNKCIALLTVENIRKMLKEINRTDLNNCVSLILRKLTGVGPPQISESILLRGEYIFTEAIKIREKVCKKGRINRNYYPYYIYKIFDAILPPNDTTNRRILQYIHLQGNDTLANNDSEWESICMELPEIKWKPTDRTHCVHFF

Annotated regions:
phrase: KYKECKYCHTDMVFNTTQFGLQCPNCGCIQ
type: DOMAIN
name: VLTF-3_Zn_ribbon
description: Viral late gene transcription factor 3 , zinc ribbon
Protein sequence:
MSESTYPSVKDLTLEEKASLTSGGDAWHLQGVESKGIPSYMITDGPHGLRKSLASSAGETDLDDSVPATCFPPAAGLSSSWNPELIHKVGEAMAEECIQEKVAVILGPGVNIKRNPLGGRCFEYWSEDPYLAGHEAIGIVEGVQSKGVGTSLKHFAANNQETDRLRVDARISPRALREIYFPAFEHIVKKAQPWTIMCSYNRINGVHSAQNHWLLTDVLRDEWGFDGIVMSDWGADHDRGASLNAGLNLEMPPSYTDDQIVYAVRDGLITPAQLDRMAQGMIDLVNKTRAAMSIDNYRFDVDAHDEVAHQAAIESIVMLKNDDAILPLNAGPVANPSATPQKIAVIGEFARTPRYQGGGSSHITPTKMTSFLDTLAERGIKADFAPGFTLDLEPADPALESEAVETAKNADVVLMFLGLPEAVESEGFDRDTLDMPAKQIALLEQVAAANQNVVVVLSNGSVITVAPWAKNAKGILESWLLGQSGGPALADVIFGQVSPSGKLAQSIPLDINDDPSMLNWPGEEGHVDYGEGVFAGYRYYDTYGKAVDYPFGYGLSYATFEITGVAVAKTGANTATVTATVTNTSDVDAAETVQVYVVPGKADVARPKHELKGFTKAFLKAGESKTVAIDLDERAFAYWSEKYNDWHVEAGEYAIEVGVSSRDIADTVAVALDGDGKTQPLTEWSTYGEWEADPFGAKIVAAVAAAGEAGELTKLPDNAMMRMFLNPMPINSLPTLLGEGGKKIAQFMLDEYAKLSK

Annotated regions:
phrase: ETVQVYVVPGKADVARPKHELKGFTKAFLKAGESKTVAIDLDERAFAYWSEKYNDWHVEAGEYAIEVGVS
type: DOMAIN
name: Fn3-like
description: Fibronectin type III-like domain

phrase: SKGIPSYMITDGPHGL
type: DOMAIN
name: Glyco_hydro_3_N
description: Glycoside hydrolase, family 3, N-terminal

phrase: FPPAAGLSSSWNPELIHKV
type: DOMAIN
name: Glyco_hydro_3_N
description: Glycoside hydrolase, family 3, N-terminal

phrase: LGGRCFEYWSEDPYLA
type: DOMAIN
name: Glyco_hydro_3_N
description: Glycoside hydrolase, family 3, N-terminal

phrase: VGTSLKHFAANNQETD
type: DOMAIN
name: Glyco_hydro_3_N
description: Glycoside hydrolase, family 3, N-terminal

phrase: VLRDEWGFDGIVMSDWGA
type: DOMAIN
name: Glyco_hydro_3_N
description: Glycoside hydrolase, family 3, N-terminal

phrase: ETVQVYVVPGKADVARPKHELKGFTKAFLKAGESKTVAIDLDERAFAYWSEKYNDWHVEAGEYAIEVGVS
type: DOMAIN
name: Fn3-like
description: Fibronectin type III-like domain

phrase: IVMLKNDDAILPLNAGPVANPSATPQKIAVIGEFARTPRYQGGGSSHITPTKMTSFLDTLAERGIKADFAPGFTLDLEPADPALESEAVETAKNADVVLMFLGLPEAVESEGFDRDTLDMPAKQIALLEQVAAANQNVVVVLSNGSVITVAPWAKNAKGILESWLLGQSGGPALADVIFGQVSPSGKLAQSIPLDINDDPSMLNWPGEEGHVDYGEGVFAGYRYYDTYGKAVDYPFGYGLS
type: DOMAIN
name: Glyco_hydro_3_C
description: Glycoside hydrolase family 3 C-terminal domain

phrase: ATCFPPAAGLSSSWNPELIHKVGEAMAEECIQEKVAVILGPGVNIKRNPLGGRCFEYWSEDPYLAGHEAIGIVEGVQSKGVGTSLKHFAANNQETDRLRVDARISPRALREIYFPAFEHIVKKAQPWTIMCSYNRINGVHSAQNHWLLTDVLRDEWGFDGIVMSDWGADHDRGASLNAGLNLEMPPSYTDDQIVYAVRDGLITPAQLDRMA
type: DOMAIN
name: Glyco_hydro_3_N
description: Glycoside hydrolase, family 3, N-terminal

phrase: VLRDEWGFDGIVMSDWG
type: ACTIVE_SITE
name: Glyco_hydro_3_AS
description: Glycoside hydrolase, family 3, active site
Protein sequence:
MSVEADGRKLLRVEVKNSQTPIENKPHWIKTRATMGPEYRDMRRRMIDGDLHTVCQEAGCPNIFECWEDREATFLIGGDHCTRRCDFCQIESAKPEGYDKDEPRRVAESVKQMGLRYATVTSVCRDDLEDEGAWLCAETIRQIHQVTPGVGVEMLAQDFSGKQDLLDIVFEARPEVFGHNLETVPRIFKRIRPGFRYDRSLAVLDSAHEAGLITKSNLILGMGETREEISQAMRALHDANTDLLTITQYLRPNSYLHPIDRWVTPQEFDELAEEAREIGFVGVMSGPLVRSSYRAGRLYRQAMEARGERPVMIVTGYRDGAKPAPFAAKE

Annotated regions:
phrase: WEDREATFLIGGDHCTRRCDFCQIESAKPEGYDKDEPRRVAESVKQMGLRYATVTSVCRDDLEDEGAWLCAETIRQIHQVTPGVGVEMLAQDFSGKQDLLDIVFEARPEVFGHNLETVPRIFKRIRPGFRYDRSLAVLDSAHEAGLITKSNLILGMGETREEISQAMRALHDANTDLLTITQYLRPNSYLHPIDRWVTPQEFDELAEEAREIGF
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VKNSQTPIENKPHWIKTRATMGPEYRDMRRRMIDGDLHTVCQEAGCPNIFECWEDREATFLIGGDHCTRRCDFCQIESAKPEGYDKDEPRRVAESVKQMGLRYATVTSVCRDDLEDEGAWLCAETIRQIHQVTPGVGVEMLAQDFSGKQDLLDIVFEARPEVFGHNLETVPRIFKRIRPGFRYDRSLAVLDSAHEAGLITKSNLILGMGETREEISQAMRALHDANTDLLTITQYLRPNSYLHPIDRWVTPQEFDELAEEAREIGFVGVMSGPLVRSSYRAGRLYRQA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: EATFLIGGDHCTRRCDFCQIESAKPEGYDKDEPRRVAESVKQMGLRYATVTSVCRDDLEDEGAWLCAETIRQIHQVTPGVGVEMLAQDFSGKQDLLDIVFEARPEVFGHNLETVPRIFKRIRPGFRYDRSLAVLDSAHEAGLITKSNLILGMGETREEISQAMRALHDANTDLLTITQYLRPNSYLHPIDRWVTPQEFDELA
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: GDHCTRRCDFCQIESAKPEGYDKDEPRRVAESVKQMGLRYATVTSVCRDDLEDEGAWLCAETIRQIHQVTPGVGVEMLAQDFSGKQDLLDIVFEARPEVFGHNLETVPRIFKRIRPGFRYDRSLAVLDSAHEAGLITKSNLILGMGETREEISQAMR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SQTPIENKPHWIKTRATMGPEYRDMRRRMIDGDLHTVCQEAG
type: DOMAIN
name: LIAS_N
description: Lipoyl synthase, N-terminal
Protein sequence:
MEHVIGGKFKLGRKIGSGSFGELYLGVNIQSSEEVAIKLESVKSRHPQLHYESKLYMLLQGGTGIPHLKWFGVEGEYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQMINRVEYMHTRGFLHRDIKPDNFLMGLGRKASQVYVIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMLTPVEVLCKSYPTEFISYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQLDYIFDWTKQGSESNRLRSSGRTSGLVGPSAERTERAAARQDVPDRFSGTVDPFARRTGSGSGHYGEHTKHRNILDSLLAPKTAVDLDKRRPTSSSRNGSTSRKALLSSSRPSSGDPIDPNRSNLIPTSSGSSRPSTMQRLHQSTGLETRSSLTKTARNVHDDPTLRTFERLSISADRRK

Annotated regions:
phrase: KLGRKIGSGSFGELYLGVNIQSSEEVAIKLESVKSRHPQLHYESKLYMLLQGGTGIPHLKWFGVEGEYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQMINRVEYMHTRGFLHRDIKPDNFLMGLGRKASQVYVIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDK
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: FKLGRKIGSGSFGELYLGVNIQSSEEVAIKLESVKSRHPQLHYESKLYMLLQGGTGIPHLKWFGVEGEYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQMINRVEYMHTRGFLHRDIKPDNFLMGLGRKASQVYVIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMLTPVEVLCKSYPTEFISYFHYCRSLRFEDKPDYSYLKRLFRDLF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: IGSGSFGELYLGVNIQSSEEVAI
type: BINDING_SITE
name: Protein_kinase_ATP_BS
description: Protein kinase, ATP binding site

phrase: FLHRDIKPDNFL
type: ACTIVE_SITE
name: Ser/Thr_kinase_AS
description: Serine/threonine-protein kinase, active site

phrase: FKLGRKIGSGSFGELYLGVNIQSSEEVAIKLESVKSRHPQLHYESKLYMLLQGGTGIPHLKWFGVEGEYNVMVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQMINRVEYMHTRGFLHRDIKPDNFLMGLGRKASQVYVIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMLTPVEVLCKSYPTEFISYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQLDY
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain
Protein sequence:
MTTETDTTEKVNLKDLTKAELQEFCDDLGLQSFRSDQIFQWLYQKGVHSFDEMTNLSKDLRARLKEVAKVPTIEHVRQQESEDGTIKFLFRLQGEEGHRVESVLIPDFYDDGVANRLTVCVSSQVGCVFGCSFCATGKMGFFRSLTHGEIVDQVQYIDALCEEKFGKGITNIVYMGMGEPLHNYKSVVNSANIITDELSIGLSPKRITVSTVGLTKQIKQLADERQPFNLAISLHAANDEKRDEIMPINSSMNLEQLKEAVQYYYTKLHRPITYEYLLFDEFNDSPEDARQLAEIVQWVPSKVNIIMYNNVAGVALKRARENRLDKFMQELVKRDITATVRRSRGDDIDAGCGQLAIKDGQPMGKSIRKN

Annotated regions:
phrase: TTEKVNLKDLTKAELQEFCDDLGLQSFRSDQIFQWLYQKGVHSFDEMTNLSKDLRARLKEVAKVPTIEHVRQQESEDGTIKFLFRLQGEEGHRVESVLIPDFYDDGVANRLTVCVSSQVGCVFGCSFCATGKMGFFRSLTHGEIVDQVQYIDALCEEKFGKGITNIVYMGMGEPLHNYKSVVNSANIITDELSIGLSPKRITVSTVGLTKQIKQLADERQPFNLAISLHAANDEKRDEIMPINSSMNLEQLKEAVQYYYTKLHRPITYEYLLFDEFNDSPEDARQLAEIVQWVPSKVNIIMYNNVAGVALKRARENRLDKFMQELVKRDITATVRRSRGDDIDAGCGQLAIK
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SSQVGCVFGCSFCATGKMGFFRSLTHGEIVDQVQYIDALCEEKFGKGITNIVYMGMGEPLHNYKSVVNSANIITDELSIGLSPKRITVSTVGLTKQIKQLADERQPFNLAISLHAANDEKRDEIMPINSSMNLEQLKEAVQYYYTKLHRPITYEYLLFDEFNDSPEDAR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VANRLTVCVSSQVGCVFGCSFCATGKMGFFRSLTHGEIVDQVQYIDALCEEKFGKGITNIVYMGMGEPLHNYKSVVNSANIITDELSIGLSPKRITVSTVGLTKQIKQLADERQPFNLAISLHAANDEKRDEIMPINSSMNLEQLKEAVQYYYTKLHRPITYEYLLFDEFNDSPEDARQLAEIVQWVPSKVNIIMYNNVAGVALKRARENRLDKFMQELVKRDITATVRRSRGD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VNLKDLTKAELQEFCDDLGLQSFRSDQIFQWLYQKGVHSFDEMTNLSKDLRARLKEVAK
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MSVKGITPQELAAYGIHNVSEIVYNPSYDLLFEEETKPTLEGYERGTLTTTGAIAVDTGIFTGRSPKDKYIVRDAITQDTVWWADQGKGKNDNKPLSQEIWNHLKGLVTEQLSGKRLFVVDTFCGANADTRLQVRFITEVAWQAHFVKNMFIRPSDEELARFEPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSMMNYLLPLKGIASMHCSANVGEKSDVAIFFGLSGTGKTTLSTDPKRKLIGDDEHGWDDDGVFNFEGGCYAKTIKLSEEAEPDIYHAIKRDALLENVVVLADGTVDFNDGSKTENTRVSYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTANQTQYHFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQAVGAQAYLVNTGWNGTGKRISIKDTRAIIDAILNGEIDKAETFTLPIFDLAVPMALPGVNPDILDPRDTYADKAQWQEKAEDLAKRFATNFDKYTDTPAGAALVSAGPKI

Annotated regions:
phrase: LIGDDEHGWDDDGVF
type: CONSERVED_SITE
name: PEPCK_ATP_CS
description: Phosphoenolpyruvate carboxykinase (ATP), conserved site
Protein sequence:
MVPSRRTWNLGATPSLRGLWRVGRAPEPEPGMARPAPAPASPAARPFPHTGPGRLRTGRGKDTPVCGDEDSSARSAARPALAQCRALSVDWAGPGSPHGLYLTLQVEHLKEKLISQAQEVSRLRSELGGTDLEKHRDLLMVENERLRQEMRRCEAELQELRTKPAGPCPGCEHSQESAQLRDKLSQLQLEMAESKGMLSELNLEVQQKTDRLAEVELRLKDCLAEKAQEEERLSRRLRDSHETIASLRAQSPPVKYVIKTVEVESSKTKQALSESQARNQHLQEQVAMQRQVLKEMEQQLQSSHQLTARLRAQIAMYESELERAHGQMLEEMQSLEEDKNRAIEEAFARAQVEMKAVHENLAGVRTNLLTLQPALRTLTNDYNGLKRQVRGFPLLLQEALRSVKAEIGQAIEEVNSNNQELLRKYRRELQLRKKCHNELVRLKGNIRVIARVRPVTKEDGEGPEATNAVTFDADDDSIIHLLHKGKPVSFELDKVFSPQASQQDVFQEVQALVTSCIDGFNVCIFAYGQTGAGKTYTMEGTAENPGINQRALQLLFSEVQEKASDWEYTITVSAAEIYNEVLRDLLGKEPQEKLEIRLCPDGSGQLYVPGLTEFQVQSVDDINKVFEFGHTNRTTEFTNLNEHSSRSHALLIVTVRGVDCSTGLRTTGKLNLVDLAGSERVGKSGAEGSRLREAQHINKSLSALGDVIAALRSRQGHVPFRNSKLTYLLQDSLSGDSKTLMVVQVSPVEKNTSETLYSLKFAERVRSVELGPGLRRAELGSWSSQEHLEWEPACQTPQPSARAHSAPSSGTSSRPGSIRRKLQPSGKSRPLPV

Annotated regions:
phrase: NIRVIARVRPVTKEDGEGPEATNAVTFDADDDSIIHLLHKGKPVSFELDKVFSPQASQQDVFQEVQALVTSCIDGFNVCIFAYGQTGAGKTYTMEGTAENPGINQRALQLLFSEVQEKASDWEYTITVSAAEIYNEVLRDLLGKEPQEKLEIRLCPDGSGQLYVPGLTEFQVQSVDDINKVFEFGHTNRTTEFTNLNEHSSRSHALLIVTVRGVDCSTGLRTTGKLNLVDLAGSERVGKSGAEGSRLREAQHINKSLSALGDVIAALRSRQGHVPFRNSKLTYLLQDSLSGDSKTLMVVQVSPVEKNTSETLYSLKFAERVRS
type: DOMAIN
name: Kinesin_motor_dom
description: Kinesin motor domain

phrase: GKLNLVDLAGS
type: CONSERVED_SITE
name: Kinesin_motor_CS
description: Kinesin motor domain, conserved site

phrase: KGNIRVIARVRPVTKEDGEGPEATNAVTFDADDDSIIHLLHKGKPVSFELDKVFSPQASQQDVFQEVQALVTSCIDGFNVCIFAYGQTGAGKTYTMEGTAENPGINQRALQLLFSEVQEKASDWEYTITVSAAEIYNEVLRDLLGKEPQEKLEIRLCPDGSGQLYVPGLTEFQVQSVDDINKVFEFGHTNRTTEFTNLNEHSSRSHALLIVTVRGVDCSTGLRTTGKLNLVDLAGSERVGKSGAEGSRLREAQHINKSLSALGDVIAALRSRQGHVPFRNSKLTYLLQDSLSGDSKTLMVVQVSPVEKNTSETLYSLKFAERVRSVELGPGLR
type: DOMAIN
name: Kinesin_motor_dom
description: Kinesin motor domain

phrase: GFNVCIFAYGQTGAGKTYTME
type: DOMAIN
name: Kinesin_motor_dom
description: Kinesin motor domain

phrase: TNLNEHSSRSHALLIVT
type: DOMAIN
name: Kinesin_motor_dom
description: Kinesin motor domain

phrase: KLNLVDLAGSERVGKSGA
type: DOMAIN
name: Kinesin_motor_dom
description: Kinesin motor domain

phrase: VPFRNSKLTYLLQDSLSGDSK
type: DOMAIN
name: Kinesin_motor_dom
description: Kinesin motor domain

phrase: RVRPVTKEDGEGPEATNAVTFDADDDSIIHLLHKGKPVSFELDKVFSPQASQQDVFQEVQALVTSCIDGFNVCIFAYGQTGAGKTYTMEGTAENPGINQRALQLLFSEVQEKASDWEYTITVSAAEIYNEVLRDLLGKEPQEKLEIRLCPDGSGQLYVPGLTEFQVQSVDDINKVFEFGHTNRTTEFTNLNEHSSRSHALLIVTVRGVDCSTGLRTTGKLNLVDLAGSERVGKSGAEGSRLREAQHINKSLSALGDVIAALRSRQGHVPFRNSKLTYLLQDSLSGDSKTLMVVQVSPVEKNTSETLYSLKFAERVRS
type: DOMAIN
name: Kinesin_motor_dom
description: Kinesin motor domain
Protein sequence:
MKNVNSKQNNHSTIGEQDIHFFHEGKHIYAYEFMGAHKASEDGIDGIRFTTWAPNAKSICVIGDFNHWQVEDKNHMKRITDAGLWSVFIADVKDGDKYKFVVTNKDTNHYVYKSDPYAFFSELRPNTASVISTQTTYKWHDEKWLKKRATADYYNSPMNTYELHLASWKTKDDRFMTYEEIAEVLPKYVKDMGYTHVEFMPLHEHPLDASWGYQPTGFYSINSRHGDLVGLKHLVDKLHTHDIGVILDWVPGHFCKDQHGLINFDGSACYEYQEPTKAINKGWGTHNFDLGRNEVKCFLISNAMYWINEFHIDGLRVDAVSNILYLNYDREDGQWVPNIHGGHENLEGIAFLRELNGVLKHTCKGVITIAEESSSWPNISTPVEQGGLGFDFKWNMGWMNDTLRYISLDPVYRKYHHNLITFSMVYHYSEKFILSISHDEVVHGKKSLINKMWGDLWNKYAGLRLYMSFMIGHPGKKLIFMGSEFGQFIEWREYEQLQWQVVDEYHTHRETLNFFKKLNEFYKAETALWECDYDHKGFQWIDANNSEQSILSFVRSNKDGKEKLIFVCNFTPVTYYDYHIGVPDAGSYIEAFNSDDLEFGGSGQLIADEIFSTPESSHGFDQRITIKVPPMATLVLKLKK

Annotated regions:
phrase: ELHLASWKTKDDRFMTYEEIAEVLPKYVKDMGYTHVEFMPLHEHPLDASWGYQPTGFYSINSRHGDLVGLKHLVDKLHTHDIGVILDWVPGHFCKDQHGLINFDGSACYEYQEPTKAINKGWGTHNFDLGRNEVKCFLISNAMYWINEFHIDGLRVDAVSNILYLNYDREDGQWVPNIHGGHENLEGIAFLRELNGVLKHTCKGVITIAEESSSWPNISTPVEQGGLGFDFKWNMGWMNDTLRYISLDPVYRKYHHNLITFSMVYHYSEKFILSISHDEVVHGKKSLINKMWGDLWNKYAGLRLYMSFMIGHPGKKLIFMGSEFGQFIEWREYEQLQWQVVDEYHTHRETLNFF
type: DOMAIN
name: Glyco_hydro_13_cat_dom
description: Glycosyl hydrolase, family 13, catalytic domain

phrase: KYVKDMGYTHVEFMPLHEHPLDASWGYQPTGFYSINSRHGDLVGLKHLVDKLHTHDIGVILDWVPGHFCK
type: DOMAIN
name: Glyco_hydro_13_cat_dom
description: Glycosyl hydrolase, family 13, catalytic domain

phrase: GRNEVKCFLISNAMYWINEFHIDGLRVDAVSNILYLNYDREDGQWVPNIHGGHENLEGIAFLRELNGVLKHTCKGVITIAEESSSWPNISTPVEQGGLGFDFKWNMGWMNDTLRYISLDPVYRKYHHNLITFSMVYHYSEKFILSISHDEVVHGKKSLINKMWGDLWNKYAGLRLYMSFMIGHPGKKLIFMGSEFGQFIEWREYEQLQWQVVDEYHTHRETLNFFKKLNEFYKAETALWECDYDHKGFQWIDANNSEQ
type: DOMAIN
name: Glyco_hydro_13_cat_dom
description: Glycosyl hydrolase, family 13, catalytic domain

phrase: HIYAYEFMGAHKASEDGIDGIRFTTWAPNAKSICVIGDFNHWQVEDKNHMKRITDAGLWSVFIADVKDGDKYKFVVTNKDTNHYVYKSDPYAFFSELRPNTASV
type: DOMAIN
name: GlgB_N_E_set_prok
description: Glycogen branching enzyme GlgB, N-terminal Early set domain

phrase: WIDANNSEQSILSFVRSNKDGKEKLIFVCNFTPVTYYDYHIGVPDAGSYIEAFNSDDLEFGGSGQLIADEIFSTPESSHGFDQRITIKVPPMATLVLK
type: DOMAIN
name: A-amylase/branching_C
description: Alpha-amylase/branching enzyme, C-terminal all beta

phrase: MGAHKASEDGIDGIRFTTWAPNAKSICVIGDFNHWQVEDKNHMKRITDAGLWSVFIADVKDGDKYKFVVTNKDTNHYVYKSDPY
type: DOMAIN
name: Glyco_hydro_13_N
description: Glycoside hydrolase, family 13, N-terminal
Protein sequence:
MVDFILNAQVRSDLGKGASRRLRRNAGLVPAVVYGGDKEPQSVTLELREIAKLLENEAAFSHVIALNVGGAKETVLIKALQRHPAKGFVMHADFLRVVADHKLTAHVPLHFINEEVAVGVKQAGGEISHTISEVEVSCLPKDLPEFIEVDMAKVELGQIVHLSDLKAPKGVELVQLAHGNDLAVANIHASRVVKEEGSEEGAAE

Annotated regions:
phrase: KLTAHVPLHFINEEVAVGVKQAGGEISHTISEVEVSCLPKDLPEFIEVDMAKVELGQIVHLSDLKAPKGVELVQLAHGNDLAVANIHAS
type: DOMAIN
name: Ribosomal_bL25_b-dom
description: Large ribosomal subunit protein bL25, beta domain

phrase: LNAQVRSDLGKGASRRLRRNAGLVPAVVYGGDKEPQSVTLELREIAKLLENEAAFSHVIALNVGGAKETVLIKALQRHPAKGFVMHAD
type: DOMAIN
name: Ribosomal_L25_dom
description: Large ribosomal subunit protein bL25, L25 domain

phrase: ILNAQVRSDLGKGASRRLRRNAGLVPAVVYGGDKEPQSVTLELREIAKLLENEAAFSHVIALNVGGAKETVLIKALQRHPAKGFVMHADFL
type: DOMAIN
name: Ribosomal_L25_dom
description: Large ribosomal subunit protein bL25, L25 domain
Protein sequence:
MSKNSVIIVAAGKGKRMNSSISKQFLQIKNKPILYYTLSKFSTHESIDEIVLVTLEDKIEVCSDIIDKYNINKVSKIVPGGKERQDSVYNGLKGVSKDCEVVLIHDAARPFVTSDIIENGIRYTNQYGAAACGVIPKDTIKIKNEKGFAIDTPNREDLFIVQTPQCFNYNIILSCHEKLKKHNKKVTDDTMVLENYGKSVYLYEGSYSNIKITTPEDLILGEQILEKLT

Annotated regions:
phrase: VLIHDAA
type: CONSERVED_SITE
name: ISPD_synthase_CS
description: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site