nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTIKAEEISALLKERIASYGSEIEVSETGTVIQVGDGIARAHGLDNVMAGELVEFSNGVMGLAQNLEEGNVGIIILGDYKGIKEGDSVKRTGRIMEVPVGEALLGRVVNPLGQPIDGLGPIVTDTYNPIERKAYGVMARKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTSVAIDTIINQKEENMICIYVAIGQKESTVRGVVETLRQNGALDYTIVVSASASQPAPLLYLAPFAGVSMGEYFMDRGQHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDELGGGSLTALPFIETQASDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVSRVGGSAQVKAMKKVAGTLRLDLASYRELEAFAQFGSDLDKATQSKLNRGQRTVEVLKQDLNAPLSVDKQVIIIYALTKGHLDDIPVTDIRRFETEMNAWLDQNRKDLCREIRQTGNLPSDEAMVDAITEFKKTFSPSV

Annotated regions:
phrase: QVKAMKKVAGTLRLDLASYRELEAFAQFGSDLDKATQSKLNRGQRTVEVLKQDLNAPLSVDKQVIIIYALTKGHLDDIPVTDIRRFETEMNAWLDQNRKDLCREIRQTGNLPSDEAMV
type: DOMAIN
name: ATP_synth_asu_C
description: ATP synthase, alpha subunit, C-terminal

phrase: GIKAIDALVPIGRGQRELIIGDRQTGKTSVAIDTIINQKEENMICIYVAIGQKESTVRGVVETLRQNGALDYTIVVSASASQPAPLLYLAPFAGVSMGEYFMDRGQHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDELGGGSLTALPFIETQASDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSV
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_nucl-bd
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain

phrase: PAINAGLSV
type: ACTIVE_SITE
name: ATPase_a/bsu_AS
description: ATPase, alpha/beta subunit, nucleotide-binding domain, active site

phrase: VSETGTVIQVGDGIARAHGLDNVMAGELVEFSNGVMGLAQNLEEGNVGIIILGDYKGIKEGDSVKRT
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_N
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain

phrase: IMEVPVGEALLGRVVNPLGQPIDGLGPIVTDTYNPIERKAYGVMARKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTSVAIDTIINQKEENMICIYVAIGQKESTVRGVVETLRQNGALDYTIVVSASASQPAPLLYLAPFAGVSMGEYFMDRGQHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDELGGGSLTALPFIETQASDISAYIPTNVISITDGQIFLQSDLFFSGVRPAINAGLSVSRV
type: DOMAIN
name: ATP_synth_F1_a_nt-bd_dom
description: ATP synthase, F1 complex, alpha subunit nucleotide-binding domain

phrase: MKKVAGTLRLDLASYRELEAFAQFGSDLDKATQSKLNRGQRTVEVLKQDLNAPLSVDKQVIIIYALTKGHLDDIPVTDIRRFETEMNAWLDQNRKDLCREIRQTGNLPSDEAMVDAITEFKKT
type: DOMAIN
name: ATP_synth_asu_C
description: ATP synthase, alpha subunit, C-terminal
Protein sequence:
MNKCAIILAAGQGTRIKSKLPKVLHKACGKEMVNHVIDAMRNAEIDDVNVIIGKGAELVKERTTSKNVSYSLQAEQLGTGHAVKCAKDFLEGKTGVVAIFTGDAPLIKAETVKNLVDTHINEKNSATLLTSVIENPTGYGRIVRNGESVEKIVEHKDCNEQEIKIQEVNAGMYCFDIESLLTSLEQLSNDNAQGEYYLTDVIEILKKDNKKVGAMITDFEETLGVNSRAELAKVESIMRNRINRTHLDNGVTIIDPLNTYIEPEVVIGKDTIIYPGNVIEGKTVIGEDCILYPNSRINNSTIGNGVEIQSSVILDSKIGDETTVGPFAYVRPESNIGEHVRIGDFVEIKKSTIGNNTKVSHLTYIGDAEVGERCNFGCGTVVVNYDGKKKHKTIIGDDSFIGCNTNLVSPVEVKDNTYIAAGSTITKEVPEGSLAIARAKQQNIEGWVERKKLK

Annotated regions:
phrase: GVTIIDPLNTYIEPEVVIGKDTIIYPGNVIEGKTVIGEDCILYPNSRINNSTIGNGVEIQSSVILDSKIGDETTVGPFAYVRPESNIGEHVRIGDFVEIKKSTIGNNTKVSHLTYIGDAEVGERCNFGCGTVVVNYDGKKKHKTIIGDDSFIGCNTNLVSPVEVKDNTYIAAGSTITKEVPEGSLAIARAK
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain

phrase: DSKIGDETTVGPFAYVRPESNIGEHVRIGDFVEIK
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: TIIGDDSFIGCNTNLVSPVEVKDNTYIAAGSTIT
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: AIILAAGQGTRIKSKLPKVLHKACGKEMVNHVIDAMRNAEIDDVNVIIGKGAELVKERTTSKNVSYSLQAEQLGTGHAVKCAKDFLEGKTGVVAIFTGDAPLIKAETVKNLVDTHINEKNSATLLTSVIENPTGYGRIVRNGESVEKIVEHKDCNEQEIKIQEVNAGMYCFDIESLLTSLEQLSNDNAQGEYYLTDVIEILKKDNKKVGAMI
type: DOMAIN
name: NTP_transferase_dom
description: Nucleotidyl transferase domain
Protein sequence:
MNKKETRHQLIRSLISETTIHTQQELQERLQKNGITITQATLSRDMKELNLVKVTSGNDTHYEALAISQTRWEHRLRFYMEDALVMLKIVQHQIILKTLPGLAQSFGSILDAMQIPEIVATVCGDDTCLIVCEDNEQAKACYETLSHYTPPFFFSNK

Annotated regions:
phrase: KKETRHQLIRSLISETTIHTQQELQERLQKNGITITQATLSRDMKELNLVKVTSGNDTHYEA
type: DOMAIN
name: Arg_repress_DNA-bd
description: Arginine repressor, DNA-binding domain

phrase: EDALVMLKIVQHQIILKTLPGLAQSFGSILDAMQIPEIVATVCGDDTCLIVCEDNEQAKACYETL
type: DOMAIN
name: Arg_repress_C
description: Arginine repressor, C-terminal
Protein sequence:
MQIILLEKVVNLGNLGDVVRVKDGYARNFLIPNKQARRATDSAIKEFEARRAELEKLAAEKLAAAQAEGEKLNGLTLQLSQKAGVDGRLFGSVTNHDIADALVAQGFKVEKAQVRMPNGPLKTVGDHPVVVSLHTDVAVDVTVLVQGDAV

Annotated regions:
phrase: GNLGDVVRVKDGYARNFLIPNKQARRA
type: DOMAIN
name: Ribosomal_bL9_N
description: Large ribosomal subunit protein bL9, N-terminal

phrase: AAAQAEGEKLNGLTLQLSQKAGVDGRLFGSVTNHDIADALVAQGFKVEKAQVRMPNGPLKTVGDHPVVVSLHTDVAVDVTVLV
type: DOMAIN
name: Ribosomal_bL9_C
description: Large ribosomal subunit protein bL9, C-terminal

phrase: MQIILLEKVVNLGNLGDVVRVKDGYARNFLIPNKQARRATDSAIKE
type: DOMAIN
name: Ribosomal_bL9_N
description: Large ribosomal subunit protein bL9, N-terminal
Protein sequence:
MTFRHCVAVDLGASSGRVMLARYDSKHRTLTLREIHRFVNCLQKTDGFDTWDIDSLEKDIRLGLKKVCNEGILIDSIGIDTWGVDYVLLDKQGQRVGLPVSYRDNRTTGIMPQALVQIGKSEIYRRSGIQFLPFNTIYQLRALTKQQPELTAQVAHALLMPDYFSYRLTGEMNWEYTNATTTQLVNINTDDWDDTLLAWTGAKKSWFGRPSHPGNVIGDWICPQGNRIPVVAVASHDTASAVIASPLANKHSAYLSSGTWSLMGFESKMPYTTDEALAANITNEGGAEGRYRVLKNIMGLWLLQRVLKERRITDLPALIAQTEALPACRFLINPNDDRFINPDDMRAEIQAACRETDQPVPVSDAELARCIFDSLALLYADILHELANLRGEKFTQLHIVGGGCQNSLLNQLCADACGIRVMAGPVEASTLGNIGIQLMTLDELNNVDDFRQVVSANYDLTTYIPNPDSEIARHVAQFQPKRQTKELCA

Annotated regions:
phrase: AYLSSGTWSLMGFESKMPYTTDEALAANITNEGGAEGRYRVLKNIMGLWLLQRVLKERRITDLPALIAQTEALPACRFLINPNDDRFINPDDMRAEIQAACRETDQPVPVSDAELARCIFDSLALLYADILHELANLRGEKFTQLHIVGGGCQNSLLNQLCADACGIRVMAGPVEASTLGNIGIQLM
type: DOMAIN
name: FGGY_C
description: Carbohydrate kinase FGGY, C-terminal

phrase: VAVDLGASSGRVMLARYDSKHRTLTLREIHRFVNCLQKTDGFDTWDIDSLEKDIRLGLKKVCNEGILIDSIGIDTWGVDYVLLDKQGQRVGLPVSYRDNRTTGIMPQALVQIGKSEIYRRSGIQFLPFNTIYQLRALTKQQPELTAQVAHALLMPDYFSYRLTGEMNWEYTNATTTQLVNINTDDWDDTLLAWTGAKKSWFGRPSHPGNVIGDWICPQGNRIPVVAVASHDTASA
type: DOMAIN
name: FGGY_N
description: Carbohydrate kinase FGGY, N-terminal
Protein sequence:
MAEAEHTASTPGGESSRRDFLIYGTTAVGAVGVALAVWPFIDFMNPAADTLALASTEVDVSAIAEGQAITVTWRGKPVFVRHRTQKEIVVARAVDPASLRDPQTDEARVQQAQWLVMVGVCTHLGCIPLGQKAGDPKGDFDGWFCPCHGSHYDSAGRIRKGPAPLNLPVPPYAFTDDTTVLIG

Annotated regions:
phrase: MAEAEHTASTPGGESSRRDFLIYGTTAVGAVGVALAVWPFIDFMNPAADTLAL
type: CONSERVED_SITE
name: TAT_signal
description: Twin-arginine translocation pathway, signal sequence

phrase: STPGGESSRRDFLIYGTTAVGAVGVALAVWPFIDFMNP
type: DOMAIN
name: Ubiq_cytC_Rdtase_Fe-S_su_TAT
description: Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal

phrase: SRRDFLIYGTTAVGAVGVALAVWPFIDFMNPAADTLALASTEVDVSAIAEGQAITVTWRGKPVFVRHRTQKEIVVARAVDPASLRDPQTDEARVQQAQWLVMVGVCTHLGCIPLGQKAGDPKGDFDGWFCPCHGSHYDSAGRIRKGPAPLNLPVPPYAFTDDTTVLI
type: DOMAIN
name: Ubiquinol_cyt_c_Rdtase_Fe-S-su
description: Ubiquinol-cytochrome c reductase, iron-sulphur subunit

phrase: SRRDFLIYGTTAVGAVGVALAVWP
type: CONSERVED_SITE
name: TAT_signal_bac_arc
description: Twin-arginine translocation pathway, signal sequence, bacterial/archaeal

phrase: IVVARAVDPASLRDPQTDEARVQQAQWLVMVGVCTHLGCIPLGQKAGDPKGDFDGWFCPCHGSHYDSAGRIRKGPAPLNLPVPPYAFTDDTTV
type: DOMAIN
name: Rieske_2Fe-2S
description: Rieske [2Fe-2S] iron-sulphur domain

phrase: VMVGVCTHLGC
type: DOMAIN
name: Rieske_Fe-S_prot_C
description: Rieske iron-sulphur protein, C-terminal

phrase: WFCPCHGSHYDS
type: DOMAIN
name: Rieske_Fe-S_prot_C
description: Rieske iron-sulphur protein, C-terminal

phrase: AGRIRKGPAPLN
type: DOMAIN
name: Rieske_Fe-S_prot_C
description: Rieske iron-sulphur protein, C-terminal

phrase: RDPQTDEARVQQAQWLVMVGVCTHLGCIPLGQKAGDPKGDFDGWFCPCHGSHYDSAGRIRKGPAPLNLP
type: DOMAIN
name: Rieske_2Fe-2S
description: Rieske [2Fe-2S] iron-sulphur domain
Protein sequence:
MSTIEEKVKTIISEQLGVKQEEVVNHASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDFISNSHQQNKSN

Annotated regions:
phrase: STIEEKVKTIISEQLGVKQEEVVNHASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDFISNS
type: DOMAIN
name: PP-bd_ACP
description: Phosphopantetheine binding ACP domain

phrase: EKVKTIISEQLGVKQEEVVNHASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDF
type: DOMAIN
name: PP-bd_ACP
description: Phosphopantetheine binding ACP domain

phrase: DLGADSLDTVELVMA
type: PTM
name: Ppantetheine_attach_site
description: Phosphopantetheine attachment site
Protein sequence:
MFITFEGMDGSGKTTTLLKVKEELERLNYQVLITREPGGEAIAEQIRQIILDNKNRDMDAWTEALLFIASRNQHLQKVIKPALEKNIIVISDRFIDSTSAYQGSARNIGVDVVNQVQQIVLKNCLPDLTLFFDVSFSEAEKRMQIRGENSKNRLDEEKSDFKQKVYQGYLELVKNNPKRIKVIDANQDIDQVYNQAIKIILEKLKENEKRTSN

Annotated regions:
phrase: FEGMDGSGKTTTLLKVKEELERLNYQVLITREPGGEAIAEQIRQIILDNKNRDMDAWTEALLFIASRNQHLQKVIKPALEKNIIVISDRFIDSTSAYQGSARNIGVDVVNQVQQIVLKNCLPDLTLFFDVSFSEAEKRMQIRGENSKNRLDEEKSDFKQKVYQGYLELVKNNPKRIKVIDANQDIDQVYN
type: DOMAIN
name: Thymidylate_kin-like_dom
description: Thymidylate kinase-like domain

phrase: ISDRFIDSTSAY
type: CONSERVED_SITE
name: Thymidylate_kin_CS
description: Thymidylate kinase, conserved site
Protein sequence:
MAPKKAKRRAAGGEGSSNVFSMFEQSQIQEYKEAFTIIDQNRDGIISKDDLRDVLASMGQLNVKNEELEAMIKEASGPINFTVFLTMFGEKLKGADPEDVIVSAFKVLDPEGTGSIKKEFLEELLTTQCDRFTAEEMKNLWAAFPPDVAGNVDYKNICYVITHGEEKEE

Annotated regions:
phrase: EYKEAFTIIDQNRDGIISKDDLRDVLASM
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: DQNRDGIISKDD
type: BINDING_SITE
name: EF_Hand_1_Ca_BS
description: EF-Hand 1, calcium-binding site

phrase: SQIQEYKEAFTIIDQNRDGIISKDDLRDVLASMGQ
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: VIVSAFKVLDPEGTGSIKKEFLEELLTT
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: EYKEAFTIIDQNRDGIISKDDLRDVLAS
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: EYKEAFTIIDQNRDGIISKDDLRDVLASMGQLNVKNEELEAMIKEASGPINFTVFLTM
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: DPEDVIVSAFKVLDPEGTGSIKKEFLEELLTTQCD
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain
Protein sequence:
MRALLAQNRLVTLCGTGGVGKTRLAIQIASASELRDGLCFVDLAPITESGIVAATAARAVGLPDQPGRSTMDSLRRFIGNRRMLMVLDNCEHLLDACAALVVELLGACPELTILATSREPIGMAGEITWRVPSMSITDEAVELFADRASRVQPGFTIANHNAAAVGEICRRLDGIPLAIEFAAARVRSMSPLEIADGLDDCFRLLAGGVRGAVQRQQTLRASIDWSHALLTETEQILFRRLAPFVGGFDLAAVRAVAAGSDLDPFSVLDQLTLLVDKSLVVADDCQGRTRYRLLETVRRYALEKLGDSGEADVHARHRDYYTALAASLNTPADNDHQRLVARAETEIDNLRAAFAWSRENGHITEALQLASSLQPIWFGRAHLREGLSWFNSILEDQRFHRLAVSTAVRARALADKAMLSTWLATSPVGATDIIAPAQQALAMAREVGDPAALVRALTACGCSSGYNAEAAAPYFAEATDLARAIDDKWTLCQILYWRGVGTCISGDPNALRAAAEECRDLADTIGDRFVSRHCSLWLSLAQMWAGNLTEALELSREITAEAEASNDVPTKVLGLYTQAQVLAYCGASAAHAIAGACIAAATELGGVYQGIGYAAMTYAALAAGDVTAALEASDAARPILRAQPDQVTMHQVLMAQLALAGGDAIAARQFANDAVDATNGWHRMVALTIRARVATARGEPELARDDAHAALACGAELHIYQGMPDAMELLAGLAGEVGSHSEGVRLLGAAAALRQQTRQVRFKIWDAGYQASVTALREAMGDEDFDRAWAEGAALSTDEAIAYAQRGRGERKRPARGWGSLTPTERDVVRLVSEGLSNKDIAKRLFVSPRTVQTHLTHVYAKLGLPSRVQLVDEAARRGSPS

Annotated regions:
phrase: PARGWGSLTPTERDVVRLVSEGLSNKDIAKRLFVSPRTVQTHLTHVYAKLGLPSRVQLVDEAARR
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: SLTPTERDVVRLVSEGLSNKDIAKRLFVSPRTVQTHLTHVYAKLGLPSRVQLVD
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: LTPTERDVVRLVSEGLSNKDIAKRLFVSPRTVQTHLTHVYAKLGLPSRVQLVDEAA
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: WGSLTPTERDVVRLVSEGLSNKDIAKRLFVSPRTVQTHLTHVYAKLGLPSRVQLVDE
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: GLSNKDIAKRLFVSPRTVQTHLTHVYA
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: LTPTERDVVRLVSE
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: GLSNKDIAKRLFVSPR
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: TVQTHLTHVYAK
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal
Protein sequence:
MKQNSLNVKQKKLSKIAFSHVGCEKNLVDTEHMQGLLHKEGYEVDSNINDANVVVVNTCSFIETAREESIRKILEYTNQGKEVIVAGCMAQHFKDELIKEIPEIKGLVGTGDYQKIAKVLDRVEKGEIVNEVSKIPEFIADEEMPRFVDKNKFVAYLRIAEGCNYNCAFCIIPKLRGPQRSRTIESILSEAKSLAKKGIQEIILISQITTNYGQDIYGKPSLAKLLNELSKVPIPWIRIHYAYPTGLTDEVIRAFKDSKNIVPYFDLPLQHSHPDVLKSMNRPWQASLNESILEKIREEIPSAVLRTSLIVGFPGEKKEHFEHLLQFLDRHKFDHVGVFIFSPEEGTAAFHLPNKVSPEVAEARKDNVISVQQNISREKNQIYVGSKMKIMVEQISDNNELIGRSYNFAPEIDGTVILSVKEKIDLKNYIGKFVEANISFADEYDLYGETIKIL

Annotated regions:
phrase: IAEGCNYNCAFCIIPKLRGPQRSRTIESILSEAKSLAKKGIQEIILISQITTNYGQDIYGKPSLAKLLNELSKVPIPWIRIHYAYPTGLTDEVIRAFKDSKNIVPYFDLPLQHSHPDVLKSMNRPWQASLNESILEKIREEIPSAVLRTSLIVGFPGEKKEHFEHLLQF
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SKIAFSHVGCEKNLVDTEHMQGLLHKEGYEVDSNINDANVVVVNTCSFIETAREESIRKILEYTNQGKEVIVAGCMAQHFKDELIKEIPEIKGLVGTGDYQKIAKVLDRVE
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: FVAYLRIAEGCNYNCAFCIIPKLRGPQRSRTIESILSEAKSLAKKGIQEIILISQITTNYGQDIYGKPSLAKLLNELSKVPIPWIRIHYAYPTGLTDEVIRAFKDSKNIVPYFDLPLQHSHPDVLKSMNRPWQASLNESILEKIREEIPSAVLRTSLIVGFPGEKKEHFEHLLQFLDRHKFDHVGVFIFSPEEGTAAFHLPNKVSPEVAEARKDNVI
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: DKNKFVAYLRIAEGCNYNCAFCIIPKLRGPQRSRTIESILSEAKSLAKKGIQEIILISQITTNYGQDIYGKPSLAKLLNELSKVPIPWIRIHYAYPTGLTDEVIRAFKDSKNIVPYFDLPLQHSHPDVLKSMNRPWQASLNESILEKIREEIPSAVLRTSLIVGFPGEKKEHFEHLLQFLDRHKFDHVGVFIFSPEEGTAAFHLPNKVSPEVAEARKDNVISVQQNISR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VGSKMKIMVEQISDNNELIGRSYNFAPEIDGTVILSVKEKIDLKNYIGKFVEANISFADEYDLYGET
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: KIAFSHVGCEKNLVDTEHMQGLLHKEGYEVDSNINDANVVVVNTCSFIETAREESIRKILEYTNQGKEVIVAGCMAQHFKDELIKEIPEIKGLV
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: LRIAEGCNYNCAFCIIPKLR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: QIYVGSKMKIMVEQISDNNELIGRSYNFAPEIDGTVILSVKEKIDLKNYIGKFVEANISFADEYDLYGETI
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: KKLSKIAFSHVGCEKNLVDTEHMQGLLHKEGYEVDSNINDANVVVVNTCSFIETAREESIRKILEYTNQGKEVIVAGCMAQHFKDELIKEIPEIKGLVGTGDYQKIAKVLDRVEKGEIVNEVSKIPEFIADEEMPRFVDKNKFVAYLRIAEGCNYNCAFCIIPKLRGPQRSRTIESILSEAKSLAKKGIQEIILISQITTNYGQDIYGKPSLAKLLNELSKVPIPWIRIHYAYPTGLTDEVIRAFKDSKNIVPYFDLPLQHSHPDVLKSMNRPWQASLNESILEKIREEIPSAVLRTSLIVGFPGEKKEHFEHLLQFLDRHKFDHVGVFIFSPEEGTAAFHLPNKVSPEVAEARKDNVISVQQNISREKNQIYVGSKMKIMVEQISDNNELIGRSYNFAPEIDGTVILSVKEKIDLKNYIGKFVEANISFADEYDLYGETI
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MSDESRPSPAETPATTFAETSAETSAAGRSPARTAAVIPAAGRGVRLGPGAPKALRALGGTPMLIHAVRAMAASRAVSLVVVVAPPDGAGEVKSLLDAHALPERTDFVVVPGGETRQESVRLGLDALPPEYGIVLVHDAARPLVPVDTVDAVIDAVREGAPAVVPAVPLADTVKQVEPAAAPGEPEPVVATPERARLRAVQTPQGFDRATLVRAHGTVTDDVTDDASMVEQLGLAVVVVPGHEEAFKVTRPLDLVLAEAVLARRRLNDGF

Annotated regions:
phrase: VLVHDAA
type: CONSERVED_SITE
name: ISPD_synthase_CS
description: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site
Protein sequence:
MEELTPRQNEVLRFLEGYLTQYGYPPTMRDIAAHLRISGTLGVSKHLTALERKGYIRRDPGNSRGISLVGHGSKSASLPIAGVVRAGMLQPAIEDIEGYLAIDQAQLKGGKFFLRVKGDSMVNAAILDGDLALIRPQPTAENNDIVVAMVDGEATLKAFYRERGQIRLQPRNPNMEPIIIREGEGEVAIVGKVVGIFRTLE

Annotated regions:
phrase: PIAGVVRAGMLQPAIEDIEGYLAIDQAQLKGGKFFLRVKGDSMVNAAILDGDLALIRPQPTAENNDIVVAMVDGEATLKAFYRERGQIRLQPRNPNMEPIIIREGEGEVAIVGKV
type: DOMAIN
name: Peptidase_S24_S26A/B/C
description: Peptidase S24/S26A/S26B/S26C

phrase: FFLRVKGDSMVNAAILDGDLALIRPQPTAENNDIVVAMVDGEATLKAFYRERGQIRLQPRNPNMEPIIIREGEGEVAIVGKV
type: DOMAIN
name: LexA-like
description: LexA-like

phrase: MEELTPRQNEVLRFLEGYLTQYGYPPTMRDIAAHLRISGTLGVSKHLTALERKGYIRRDPGNSR
type: DOMAIN
name: LexA_DNA-bd_dom
description: LexA repressor, DNA-binding domain
Protein sequence:
MSAAQVSSSRRQSCYLCDLPRMPWAMIWDFTEPVCRGCVNYEGADRIEFVIDTARQLKRSHSFQDGRSPGPQGPGSGASNKQHPAVQAALTAKDTAQLNHLDGATKASAASGLERYGLATERGRFEYSLAARLPNGLNGFPKPGEDGPPELNRQSPNSRGRSGHGLIPQLVPGQLSVPPNLLPQTLLNGPPSGNPTGAPHVLGRGPANSSGLGVPPTASSSGDPKRPGSVSSTDQERELKEKQRNSEALSELTESLRNRTEEWVGKPKAVRDALLTLTASAPFDVRFKKDHNLLGRVFAFDAASKPGLLDYELKLFVEYPSGSLNIFSSASGVAKQMYQDCMKDFGRGLSSGFKYLEYEKKHGSGDWRLLGDLLPESVRFFKEMVGADMLPQPYLDPGCPMLPSALVNLPRALAAAAASSSAGSSGQTRSGVRKRKASPEPDSADGQMWITGQSDGIKQLSMAPAGVTPSSSSSAAYGVPSAPPPPLGPGHPQRTTPPESAPPNGPSPMAALQSVTDTLGNAHSPKEGQTGGIPPVHSTTSSARRNSSSPVSPASVTGQRRLNSRNGAGSVELSLQVAPAGGAPHLGMDQVHPQNIPDSPMANSGPLCCTICHERLEDTHFVQCPSVPSHKFCFPCSRDSIKAQGATGEVYCPSGEKCPLVGSNVPWAFMQGEIATILAGDVKVKKERDP

Annotated regions:
phrase: RRQSCYLCDLPRMPWAMIWDFTEPVCRGCVNYEGADRIEFVIDTARQLKRS
type: DOMAIN
name: Interferon_reg_fac2-bd1_2_Znf
description: Interferon regulatory factor 2-binding protein 1 & 2, zinc finger
Protein sequence:
MTKSNGDVEAAAQVQSLGGKPSNGHGQLNGNGYHQNGGRRDSSQAFTPLLSQHNNGTTNGEVTTPPPSTVLYESTPSNNNEWKAPEDLGHLKNGLGNILSSNNNGTGNGHSLSEKYAHEQAPLTGGYKLPPRSSESEESDFDSDLNGGSSAESSSSCGLFGCRPRWARRFASTHVFMVVFLLAYILQGMYMTYFVSVITTIEKLFQIKSKTTGILLSASEMGQICTAMLLTYFAGRGHRPRWIACGMVLFSIAAFSCALPHFIFGEQLMHSSVILQQTQVSPPNNSFSSHWLNASSEQVNPNLCILGGNQTHSGSECNEERQLEQASHSKITVIVLCIFFGSLLSSGIGQTAVATLGIPYIDDNVGSKQSPMYMAVTIGMRILGPASGFIFGSFCTRWYVNFSNPGFDATDPRWIGAWWLGPVAIGSLMLLASIAMFSFPKQLRGKQKPPGQTATPAAPVEPEEKPKLKDFPKTVRRQLSNDILMFRTASCVFHLLPIAGLYTFLPKYLETQFRLATYDANMIAAFCGILVMGIGIVISGLFILKRKPTARGVAAWIAFTALVYSAGMIILMFIGCSMNDFAGYKPSDGNSPALIEPTCSAALNCTCDKENFAPICADGKMYISACHAGCSSSSLRPSDNRTLYSDCACIPDAPEAVNGYCDNNCKNFIYFILIFAICVFMHSTSEVGSMLLVMRCTHPKDKAMAMGVIQSAIGLFGNVPCPIIYGAVVDSACLIWKSVCGKHGACSLYDADTFRQYFLGITAGIMFL

Annotated regions:
phrase: ALIEPTCSAALNCTCDKENFAPICADGKMYISACHAGCSSSSLRPSDNRTLYSDCACI
type: DOMAIN
name: Kazal_dom
description: Kazal domain

phrase: NCTCDKENFAPICADGKMYISACHAGCSSSSLRPSDNRTLYSDCA
type: DOMAIN
name: Kazal_dom
description: Kazal domain
Protein sequence:
MTDIHAQRILILDFGSQYTQLIARRVREIGVYCEIRAFDMTAEELAEFAPKGIILSGGPESVTAAQTPRAPQAVFEAGIPVLGICYGMQTMAEQLGGKVIAGEKHEFGYARVEKAEPNALLDGIVDHEEQGKEFLDVWMSHGDRVGEMPAGFVATATTGSCPIAGMANDEKRFYGIQFHPEVTHTLQGGRLLERFIRELCECEALWTPSNIISDAIDTIREQVGTDEVILGLSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRHQEGDQVMEMFADNMGVKVIRVDAEDNFLGKLAGEADPEKKRKIIGNTFIDIFDDEASKLQNANWLAQGTIYPDVIESAASKTGKAHVIKSHHNVGGLPEDMKLKLVEPLRELFKDEVRKIGLELGLPYDMVYRHPFPGPGLGVRILGEVKKEYADTLRLADHIFIEELRAAGLYHKTSQAFAVFLPVKSVGVVGDARRYEYVVALRAVETIDFMTARWAHLPYDFLELVSSRIINEIPGISRVTYDISSKPPATIEWE

Annotated regions:
phrase: WTPSNIISDAIDTIREQVGTDEVILGLSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRHQEGDQVMEMFADNMGVKVIRVDAEDNFLGKLAGEADPEKKRKIIGNTFIDIFDDEASKLQNANWLAQGTIYPDVIESAASKTGKAHVIKSHHNVGGLPEDMKLKLVEPLRELFKDEVRKIGLELGLPYDMVY
type: DOMAIN
name: GMPS_ATP_PPase_dom
description: GMP synthetase ATP pyrophosphatase domain

phrase: IDTIREQVGTDEVILGLSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRHQEGDQVMEMFADNMGVKVIRVDAED
type: DOMAIN
name: NAD/GMP_synthase
description: NAD/GMP synthase

phrase: LILDFGSQYTQLIARRVREIGVYCEIRAFDMTAEELAEFAPKGIILSGGPESVTAAQTPRAPQAVFEAGIPVLGICYGMQTMAEQLGGKVIAGEKHEFGYARVEKAEPNALLDGIVDHEEQGKEFLDVWMSHGDRVGEMPAGFVATATTGSCPIAGMANDEKRFYGIQFHPEVTHTLQGGRLLERFI
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: IREQVGTDEVILGLSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRHQEGDQVMEMFADNMGVKVIRVDAEDNFLGKLAGEADPEKKRKIIGNTFIDIFDDEASKLQNANWLAQGTIYPDVIESAASKTGKAHVIKSHHNVGGLPEDMKLKLVEPLRELFKDEVRKIGLELGLPYDMVYRHPFPGPGLGVRILGEVKKEYADTLRLADHIFIEELRAAGLYHKTSQAFAVFLPVKSVGVVGDARRYEYVVALRAVETIDFMTARWAHLPYDFLELVSSRIINEIPGISRVTYDISSKPPATIEW
type: DOMAIN
name: GMP_synth_C
description: GMP synthase, C-terminal

phrase: NIISDAIDTIREQVGTDEVILGLSGGVDSSVVAALLHKAIGDQLTCVFVDNGLLRHQEGDQVMEMFADNMGVKVIRVDAEDNFLGKLAGEADPEKKRKIIGNTFIDIFDDEASKLQNANWLAQGTIYPDVIESAASKTGKAHVIKSHHNVGGLPEDMKLKLVEPLRELFKDEVRKIGLELGLPYDMVYRHPFPGPGLGVRILGEVKKEYADTLRLADHIFIEELRAAGLYHKTSQAFAVFLPVKSVGVVGDARRYEYVVALRAVETIDFMTARWAHLPYDFLELVSSRIINEIPGISRVTYDISSKPPATIEW
type: DOMAIN
name: GMP_synth_C
description: GMP synthase, C-terminal

phrase: EELRAAGLYHKTSQAFAVFLPVKSVGVVGDARRYEYVVALRAVETIDFMTARWAHLPYDFLELVSSRIINEIPGISRVTYDISSKPPATIE
type: DOMAIN
name: GMP_synth_C
description: GMP synthase, C-terminal

phrase: ILILDFGSQYTQLIARRVREIGVYCEIRAFDMTAEELAEFAPKGIILSGGPESVTAAQTPRAPQAVFEAGIPVLGICYGMQTMAEQLGGKVIAGEKHEFGYARVEKAEPNALLDGIVDHEEQGKEFLDVWMSHGDRVGEMPAGFVATATTGSCPIAGMANDEKRFYGIQFHPEVTHTLQGGRLLERFIRELCEC
type: DOMAIN
name: GMP_synth_GATase
description: GMP synthase, glutamine amidotransferase

phrase: ILILDFGSQYTQLIARRVREIGVYCEIRAFDMTAEELAEFAPKGIILSGGPESVTAAQTPRAPQAVFEAGIPVLGICYGMQTMAEQLGGKVIAGEKHEFGYARVEKAEPNALLDGIVDHEEQGKEFLDVWMSHGDRVGEMPAGFVATATTGSCPIAGMANDEKRFYGIQFHPEVTHTLQGGRLLERF
type: DOMAIN
name: GMP_synth_GATase
description: GMP synthase, glutamine amidotransferase
Protein sequence:
MTGREEATDEKPKVKLYPSFGIDKSRLNGSGFRSKGFAITDLLGLESELQPHQSGPGAGPNGEGQSAAVGGFSFPGGSLPLGLGFLCSLAAQQPPGAPCFLPSHIPLLQSRTESHFMQNLEQQRDVYSDDDCLSGDRNDGKNSGNSQKRKKRRHRTVFTSHQLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKCWGRSSVMAEYGLYGAMVRHSIPLPESIINSAKSGMMGSCAPWLLGEPAGMHKKSMEIVKKAPGTPESTHSDTYSEEHKGKDSDTTWSSGANGADDSEDMAIDLSSTSKQENKSTLKRSPPRTENSSDSENES

Annotated regions:
phrase: KCWGRSSVMAEYGLYGAMVRHSIPLPESIINSAKSGMMGSCAPWLLGEPAGMHKKSM
type: DOMAIN
name: CVC
description: CVC domain

phrase: LAMKTELPEDRIQVWFQNRRAKW
type: CONSERVED_SITE
name: Homeobox_CS
description: Homeobox, conserved site

phrase: RKKRRHRTVFTSHQLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRK
type: DOMAIN
name: HD
description: Homeodomain

phrase: RRHRTVFTSHQLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWR
type: DOMAIN
name: HD
description: Homeodomain

phrase: RRHRTVFTSHQLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKR
type: DOMAIN
name: HD
description: Homeodomain

phrase: KRRHRTVFTSHQLEELEKAFNEAHYPDVYAREMLAMKTELPEDRIQVWFQNRRAKWRKREKC
type: DOMAIN
name: HD
description: Homeodomain
Protein sequence:
MLELQRTIAKQVSMQGTGLHTGTECKLTFKPAPENHGIKFVRADLGGKPEIPAIADNVVDVSRGTTIGIGEAKVHTVEHVLAAIVGHQIDNIIIEVEGIEPPVGDGSALLFCEALQKAGFEQQTVPKDYLIIDQTIMHHEDDNQIDIVALPLDNYRVTVMVDYQNPALGSQHTGLFDLEKEFVKEFAPARTFCFLSEVEELADQDLIKGGDLDNAIVIIDHDLNKKEYKNLSSRLGIKEEIFTGGNGILNNKQLRFKNEPVRHKLLDLMGDLALIGAPVKAQILAARPGHKANVEFAKQVRKLYQQKKLVKKFQLVKKEGVIFDSAAIERILPHRYPFLLVDKIVDLEIGKKVVGVKSVTYNEPFFPGHFPGNPIMPGVLILEAMAQTGGVFLLNSIPDHENKIAYFMQINNAKFRKPVVPGDQLFMVVEMVNQKSKVVTIKGKSYVNDVLVAEADFMVAIVDKPNNDKEQ

Annotated regions:
Protein sequence:
MGELLSFQIFINEPVELLNLSLNAKAVLPEAAVLMAMLGTLLVDLAGEKISARWSPPICYAGLGSALILLAMQWDGEIQESFLGAFIADNLAIAFRGVIVLSTLISLLISWRYADQNGSPIGEFAAILLAATLGAMLLCGSTDLVSVFVSLETLSVASYLLSGYLKRDSRSSEAALKYLLVGSAAAAVFLYGASLLYGISGSTNLKEIGTTLLSAPTPLSALALVFVLSTVAFKIAAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAGFALAIRILVGCFSAFDTQWKLLFTVLAVLSMSLGNVVALAQKSMKRMLAYSSIGQAGFVMIGLVCGTEDGFAAMVLYMAAYLFMNLGAFACIILFSIRTGSDQISDYAGLYQKDPLITLGLSLCLLSLGGIPPMLGFFGKIYLFFAGWADGQYLLVTVGLVTSVISIYYYISVIKMMVVTEPKEASDVVKAYPSIEWSIPGMSSLKVALIFCVLVTAIGGIISNPLFNFADSAVNGTPLLREAITLASKSSIG

Annotated regions:
phrase: STDLVSVFVSLETLSVASYLLSGYLKRDSRSSEAALKYLLVGSAAAAVFLYGASLLYGISGSTNLKEIGTTLLSAPTPLSALALVFVLSTVAFKIAAVPFHQWTPDVYEGSPTPVVAFLSVGSKAAGFALAIRILVGCFSAFDTQWKLLFTVLAVLSMSLGNVVALAQKSMKRMLAYSSIGQAGFVMIGLVCGTEDGFAAMVLYMAAYLFMNLGAFACIILFSIRTGSDQISDYAGLYQKDPLITLGLSLCLLSLGGIPPMLGFFGKIYLFFAGWADGQYLLVTVGLVTSVI
type: DOMAIN
name: ND/Mrp_TM
description: NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domain
Protein sequence:
MPVRRYGGRYNNSSSGVSNALSSSSTAGLRPSPSSRENSTPLSTHHDPAFLSTNHAKNEGGLCQKHHVRFREPSVEVEVEIMDDEPSRGLQKPPSRARHAADANNNSASAQCNTTRTSDYTFYTNEDQKKVYEALRSLRPLPELQEPRRVKEYSEVSIKESLYRIVEAHDVIMVAGAFFGDEGKGKTVDAVAHHPLCTCIARVNSGENAGHTVYDKAGRKFVFNLAPSGLLLPGKRNYIGPECVMDPVSFMEKEIIQLISAGIDYHDRLFIGNVCIVTPYHKLLDLLGSAANSSTLKGMAPVHGSKVMKRGIRLDHIFNDDETLRKRLEKDMETYLGLLKVKNLSDADVVRLCREENSDGVLRVPDYVIAFAQAKEKVKFLMNLYHDRVRNNPDFPARCDVIYELRAAVLRGEKVLLEGPQSYWLSNARTKFWESTTSADTTAAGLLAASQLNFQQFKSVVLNVHKAPGSSRVGIGACPSSFVPQDFFSAQNIKTLHDLPPATCANFEAIQRTLFRDGFPYSNDKAKHNGIMAPVEYSDETGDYNIGVAMAIASAQHHGECGAVTKKPRVCGFFDCVLQHEVNSIQGPYLTISALDRGDEYDKVGVTIAYVYYNPEGKQVNVNGHVYKNGDIIRAGDPVPSESALYHCHPIVKLIDGWRDNPIAAAKRRRNTPLPRGLCELLSTIEYFTNCKVLSIGNGPNGDDIIYLRQ

Annotated regions:
phrase: FFGDEGK
type: BINDING_SITE
name: Adenylosuccin_syn_GTP-bd
description: Adenylosuccinate synthase, GTP-binding site
Protein sequence:
MGHHHDGGDGVPQHHVNSPRFSGPMTRRAQSFKRGGSAGSSSNNNNTHVGVSGGDGNNNNNTSSTLRVHHEIDLPLNSPRSEIVSGSSGSDPSGGFDSALNRKHQTYGQLRERVVKGLLRKPMGSVVSDFSLRERKKLGHWMFFAFCGVCLFLGVFKICATGWLGSAIDGAASDQDLSIPRVNLLDHSSHDYIYKDGGNDVDPTLVMVASDVVGDQNSVVEFSGVWAKPESGNFSRCIDSSRSRKKLGANTNGYLLINANGGLNQMRFGICDMVAVAKIMKATLVLPSLDHSSYWADDSGFKDLFDWQHFIEELKDDIHIVEMLPSELAGIEPFVKTPISWSKVGYYKKEVLPLLKQHIVMYLTHTDSRLANNDLPDSVQKLRCRVNYRALKYSAPIEELGNVLVSRMRQDRGPYLALHLRYEKDMLAFTGCSHSLTAEEDEELRQMRYEVSHWKEKEINGTERRLQGGCPLTPRETSLLLRALEFPSSSRIYLVAGEAYGNGSMDPLNTDFPNIFSHSILATKEELSPFNNHQNMLAGLDYIVALQSEVFLYTYDGNMAKAVQGHRRFEDFKKTINPDKMNFVKLVDALDEGRISWKKFSSKVKKLHKDRNGAPYNRESGEFPKLEESFYANPLPGCICENTEEEGLMRRT

Annotated regions: