nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSMVETAPSKIQVRNLNFYYGKFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNKMFELYPEQRAEGEILLDGDNILTNSQDIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRADMDERVQWALTKAALWNETKDKLHQSGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDHTAFMYLGELIEFSNTDDLFTKPAKKQTEDYITGRYG

Annotated regions:
phrase: LSGGQQQRLCIARG
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: KNQVTAFIGPSGCGKSTLLRTFNKMFELYPEQRAEGEILLDGDNILTNSQDIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRADMDERVQWALTKAALWNETKDKLHQSGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDHTAFMYLGELIEFSNT
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: IQVRNLNFYYGKFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNKMFELYPEQRAEGEILLDGDNILTNSQDIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRADMDERVQWALTKAALWNETKDKLHQSGYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDHTAFMYLGELIEFSNTDDLFTKPAKKQTEDY
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: LKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNKMFELYPEQRAEGEILLDGDNILTNSQDIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRADMDERVQWALTKAALWNETKDKLHQSGYSLSGGQQQRLCIARGIAIRPEVLLLDEP
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain
Protein sequence:
MLYLVGLGLSDETDITVKGLEVVKKAERVYLEAYTSILLVDQATLESYYGRPIVVADREMVESNSDEILRDADKVDVAFCVVGDPFGATTHTDLVLRARELGIQVRTVPNASIMSGIGAAGLQLYNFGQTVSMVFFLDNWRPASFYDRIKENRSIGLHTLVLLDIKVKEQSLENMARGRKIYEPPRYMTVGTCAQQMLEIEEEKQEGVYGPESLAIGCARVGGKTEKFVSGTLKELCDADDLLGPPLHSLILLGRRTHELEHDFVREFAVNKENWDRIWKAEYCGKQ

Annotated regions:
phrase: MLYLVGLGLSDETDITVKGLEVVKKAERVYLEAYTSILLVDQATLESYYGRPIVVADREMVESNSDEILRDADKVDVAFCVVGDPFGATTHTDLVLRARELGIQVRTVPNASIMSGIGAAGLQLYNFGQTVSMVFFLDNWRPASFYDRIKENRSIGLHTLVLLDIKVKEQSLENMARGRKIYEPPRYMTVGTCAQQMLEIEEEKQEGVYGPESLAIGCARVGGKTEKFVSGTLKE
type: DOMAIN
name: 4pyrrol_Mease
description: Tetrapyrrole methylase
Protein sequence:
MNNEDISDKKLTLQGLSKLKLDLNLNSSASPSTGATVVKKRRKKSHDAEEHNLFDESKLCSLTEKEQIFRINAVQNAALLKERNQREEKEKTAKEDSNKEIDEKNEADALSKEINKQVLSNTHLVEPKEDSIDHEDNDKKSFKVNKDIYSKHSKLVIAQAIDEKTEQPPVFKQRFGIRGRKSKFTKGKNISREVIIPDKITIRELSIRMAEDSKSVLKMFKEEVGESYRVDDLVDPDIACEIVEKFNHTAKRVSDTNREKDLFFIEGRESLPKKPKPPIVTFMGHVDHGKTSLLDAFRESNVAERESGGITQHIGAYQITTKDKQKITFIDTPGHEAFTAMRARGANITNIVVIVVAADDGIMKQTVEAINHAKAANVSIIVAINKIDKSEPGDVEKIINSLPQYDLIPEGLGGDVMIMPVSAKKKTNLDKLEEAILLIAELMKLEAIEDCRALGWVIESKIDKAKGISATLIVEEGTLKVGDILVVGTTYSKVRSMVNHLGQREKAALPSAPIEITGLNGVPNAGDKFVVVNSEKQAREIVEYRLELIKKKKEDLGDNNLDIFSRNNSETEELSVVLKCDVTGSIEAISSSIDKLGKDQVKLNILHKAVGGITDSDVLLAEASSAVILAFNVKVDSKIRDLAKQKGIEIHTYNIIYELIDDMRMYLTKMLKPVTREVRVGFASVRQIFNVSKAGNIIGCYVSDGVIRKDSLIKVMRGGKLVHEGKLKALRRFKDDIKEVGVNFECGVSLEGNVDIKVGDILEAYQLVQEERVL

Annotated regions:
phrase: PKPPIVTFMGHVDHGKTSLLDAFRESNVAERESGGITQHIGAYQITTKDKQKITFIDTPGHEAFTAMRARGANITNIVVIVVAADDGIMKQTVEAINHAKAANVSIIVAINKIDKSEPGDVEKIINSLPQYDLIPEGLGGDVMIMPVSAKKKTNLDKLEEAILLIAELMKL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: RALGWVIESKIDKAKGISATLIVEEGTLKVGDILVVGTTYSKVRSMVNHLGQREKAALPSAPIEITGLNGVPNAGDKFVVVNSEKQAREIVEYRL
type: DOMAIN
name: IF2_II
description: Translation initiation factor IF-2, domain II

phrase: IVTFMGHVDHGKTSLLDAFRESNVAERESGGITQHIGAYQITTKDKQKITFIDTPGHEAFTAMRARGANITNIVVIVVAADDGIMKQTVEAINHAKAANVSIIVAINKIDKSEPGDVEKIINSLPQYDLIPEGLGGDVMIMPVSAKKKTNLDKLEEAI
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: ALGWVIESKIDKAKGISATLIVEEGTLKVGDILVVGTTYSKVRSMVNHLGQREKAALPSAPIEITGLNGVPNAGDKFVV
type: DOMAIN
name: EF-G-like_DII
description: Elongation factor G-like, domain II

phrase: NLDIFSRNNSETEELSVVLKCDVTGSIEAISSSIDKLGKDQVKLNILHKAVGGITDSDVLLAEASSAVILAFNVKVDSKIRDLAKQKGIEIHTYNIIYELIDD
type: DOMAIN
name: TIF_IF2_dom3
description: Translation initiation factor IF- 2, domain 3

phrase: IVTFMGHVDHGKTSLLDAFRESNVAERESGGITQHIGAYQITTKDKQKITFIDTPGHEAFTAMRARGANITNIVVIVVAADDGIMKQTVEAINHAKAANVSIIVAINKIDKSEPGDVEKIINSLPQYDLIPEGLGGDVMIMPVSAKKKTNLDKL
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain
Protein sequence:
MIFVLDVGNTNTVLGVYDGDELKHHWRIETSRGKTEDEYAMTIKALLNHVGLQFSDIDGIIISSVVPPIMFALERMCLKYFHIKPIIVGPGIKTGLNIKYDNPREVGADRIVNAVAGIHLYGSPLIIVDFGTATTYCYINEHKQYMGGAIAPGIMISTEALFARAAKLPRIEIARPDDIIGKNTVSAMQAGILYGYVGQVEGIVSRMKAKSSVPPKVIATGGLASLIASESSVIDIVDPFLTLTGLKILYEKNVDKKQ

Annotated regions:
Protein sequence:
MKQYLITGGTGMVGSQLVNEIKKSDSHITILTRHDQISNNKKISYVNWAKSGWEHKVPQNIDVVINLAGATLNKRWTPEYKQTLMLSRIQSTQALYELFKSRNKAPKVLFNASATGYYPPDLFMSYTEVYKTLPFDFLSDIVYQWERFAQQFEQLGTRVVIGRFGIILSNEGGALQTMKLPYEYYIGGKLGSGQQWYSWIHINDLIQAILFLINNESASGPFNLTAPIPERQNLFGYTLARAMHKPHETWVPSLAMRLILGQMSTVVLDTQKVLPNKIQALGFQFKYSNLKMALEDLISK

Annotated regions:
phrase: LITGGTGMVGSQLVNEIKKSDSHITILTRHDQISNNKKISYVNWAKSGWEHKVPQNIDVVINLAGATLNKRWTPEYKQTLMLSRIQSTQALYELFKSRNKAPKVLFNASATGYYPPDLFMSYTEVYKTLPFDFLSDIVYQWERFAQQFEQLGTRVVIGRFGIILSNEGGALQTMKLPYEYYIGGKLGSGQQWYSWIHINDLIQAILFLINNESASGP
type: DOMAIN
name: Epimerase_deHydtase
description: NAD-dependent epimerase/dehydratase

phrase: VPSLAMRLILGQMSTVVLDTQKVLPNKIQALGFQFKYSNLKMALED
type: DOMAIN
name: DUF1731
description: Domain of unknown function DUF1731
Protein sequence:
MTARGETPEVETREDEEQSVKLAEILELLVAAGYFRARIKGLSPFDKVVGGMTWCITTCNFDIDVDLLFQENSTIGQKIALTEKIVSVLPKMKCPHRLEPHQIQGLDFIHIFPVIQWLVKRAIETRQEMGDYIRSYSVSQFQKEHSLPEDQEFEHRREKAVRTLSETLDVYRPRRKYKRQGGSAELMDEESRVHSTLLEYGRRYGLSKQMKPEKPEDRKVPVPQGLVGKGEVKEEEELRAEEELRIKALMTEMAAMGMEEGRLTASTVGQIVGLQSDEIKQMVSEYAEKQSELSAEDRPEYLGAAQQHRRKVASLNKQIGQRKKLLDQLQEKASELQSGSCEAKKQLTEVTSHMENLEQELLVLEKVESKADPSVLQKLRDLVAQNESLKLQEQQFRSKCREEMSRLQQNIDSLKAAATEHGEEKEQSQAFEQQYKAEKEKLQKIRLLLARRNREIAILHRKIDEVPSRAELTQYQKRFIELYGQVSATHKETKQFFTLYNTLDDKKVYLEKEVNLLNSVHDNFQQAMASPSVRDQFLRQMEQIVDGIRQSRNKMEKKKQENKMKRDQLNDEYLELLEKQRLYFKTVKEFREECRRNETLLTKMKGQTP

Annotated regions:
phrase: DVYRPRRKYKRQGGSAELMDEESRVHSTLLEYGRRYGLSKQMKPEKPEDRKVPVPQGLVGKGEVKEEEELRAEEELRIKALMTEMAAMGMEEGRLTASTVGQIVGLQSDEIKQMVSEYAEKQSELSAEDRPEYLGAAQQHRRKVASLNKQIGQRKKLLDQLQEKASELQSGSCEAKKQLTEVTSHMENLEQELLVLEKVESKADPSVLQKLRDLVAQNESLKLQEQQFRSKCREEMSRLQQNIDSLKAAATEHGEEKEQSQAFEQQYKAEKEKLQKIRLLLARRNREIAILHRKIDEVPSRAELTQYQKRFIELYGQVSATHKETKQFFTLYNTLDDKKVYLEKEVNLLNSVHDNFQQAMASPSVRDQFLRQMEQIVDGIRQSRNKMEKKKQENKMKRDQLNDEYLELLEKQRLYFKTVKEFREECRRNETLL
type: DOMAIN
name: CCDC93_CC
description: CCDC93, coiled-coil domain

phrase: EQSVKLAEILELLVAAGYFRARIKGLSPFDKVVGGMTWCITTCNFDIDVDLLFQENSTIGQKIALTEKIVSVLPKMKCPHRLEPHQIQGLDFIHIFPVIQWLVKRA
type: DOMAIN
name: CCDC93_N
description: CCDC93, N-terminal domain
Protein sequence:
MLKAIVTGGGGKMGARIISLLEEEGGMQLTGVVEKKDHPAAGKDIGEFLGSGKRGIVIQSDLGFCIAGGDVIIDFTSHEASMRHMEMAAEHKRPIVIGSTGFSADEMDRIRKFAQNVPCVLAPNMSVGVNVMFKLLKIVAETLGDDYDVEILEVHHRLKKDAPSGTALKMAQVVAEALGRELDEVGIYERKGLIGERSKKEIGIQALRAGDIVGEHTVIFGAVGERLELIHRAHSRDNFARGAIRAAKWVVRQEPGLYDMQDVLGFRS

Annotated regions:
phrase: EILEVHHRLKKDAPSGT
type: CONSERVED_SITE
name: DapB_N_CS
description: Dihydrodipicolinate reductase, conserved site

phrase: GVNVMFKLLKIVAETLGDDYDVEILEVHHRLKKDAPSGTALKMAQVVAEALGRELDEVGIYERKGLIGERSKKEIGIQALRAGDIVGEHTVIFGAVGERLELIHRAHSRDNFARGAIRAAKWVVRQEPGLYDMQDV
type: DOMAIN
name: DapB_C
description: Dihydrodipicolinate reductase, C-terminal

phrase: KAIVTGGGGKMGARIISLLEEEGGMQLTGVVEKKDHPAAGKDIGEFLGSGKRGIVIQSDLGFCIAGGDVIIDFTSHEASMRHMEMAAEHKRPIVIGSTGFSADEMDRIRKFAQNVPCVLAPN
type: DOMAIN
name: DapB_N
description: Dihydrodipicolinate reductase, N-terminal
Protein sequence:
MKLNRFGAVLSVLSAGALVLSGCGSDNNGAGAGAAGSSSSKVSCGGKKALKASGSTAQANAMTRFVNAFEQACPGQTLNYTANGSGAGISEFNGKQTDFGGSDSPLAPSEYAAAQQRCGSPAWNLPVVFGPIAITYNVAGLNSLNLDGATAAKIFNGAITTWNDPGIQALNPGVALPAEPIHVVFRNDESGTTDNFQKYLDAAADGAWGKGAGKTFKGGVGEGAKGNDGTSAAIKATEGSITYNEWSFAQAQKLNMAKIITSAGPDAVAISADSVGKTIAGAKISGQGNDLVLDTLSFYKPTQAGSYPIVLATYEIVCSKYPDPQVGTAVKAFLQSTVGAGQNGLADNGYIPIPDAFKSRLSAAINAIT

Annotated regions:
phrase: ALKASGSTAQANAMTRFVNAFEQACPGQTLNYTANGSGAGISEFNGKQTDFGGSDSPLAPSEYAAAQQRCGSPAWNLPVVFGPIAITYNVAGLNSLNLDGATAAKIFNGAITTWNDPGIQALNPGVALPAEPIHVVFRNDESGTTDNFQKYLDAAADGAWGKGAGKTFKGGVGEGAKGNDGTSAAIKATEGSITYNEWSFAQAQKLNMAKIITSAGPDAVAISADSVGKTIAGAKISGQGNDLVLDTLSFYKPTQAGSYPIVLATYEIVCSKYPDPQVGTAVKAFL
type: DOMAIN
name: PBP_domain
description: PBP domain
Protein sequence:
MQVSVETTQGLGRRVTITVAADIIESAVKSELVNAAKKVRIDGFRKGKVPMNVVAQRYGASVRQDVLGDLMQRNFVDAIIKEKINPVGAPNYTPGEYAVGGDFTYTVEFDVYPEVELKGLEAIEVEKPVVEVTDADVDTMLDTLRKQQATWKETDRAATAEDRATIDFTGSIDGEVFEGGKASDFVLAMGQSRMIPGFEDGIVGHKAGEEFTINVNFPEDYHAENLKGKAAQFVIVLKKVEERELPELTEEFIKRFGVADGSQEGLRAEVRKNMERELKGAVRNRVKTQVLDGLINANDIEVPVALIDGEIDVLRRQAAQRFGGNEKQALELPRELFEEQAKRRVVIGLLLGEVISSNELKADEARVNVLIEEMASAYEDPQEVIEFYSKNKELLNNMRNVALEEQAVETVLAKAKVVEKSVSFNELMNQTTTA

Annotated regions:
phrase: EDRATIDFTGSIDGEVFEGGKASDFVLAMGQSRMIPGFEDGIVGHKAGEEFTINVNFPEDYHAENLKGKAAQFVIVLKKVEEREL
type: DOMAIN
name: PPIase_FKBP_dom
description: FKBP-type peptidyl-prolyl cis-trans isomerase domain

phrase: EGLRAEVRKNMERELKGAVRNRVKTQVLDGLINANDIEVPVALIDGEIDVLRRQAAQRFGGNEKQALELPRELFEEQAKRRVVIGLLLGEVISSNELKADEARVNVLIEEMASAYEDPQEVIEFYSKNKELLNNMRNVALEEQAVETV
type: DOMAIN
name: Trigger_fac_C
description: Trigger factor, C-terminal

phrase: MQVSVETTQGLGRRVTITVAADIIESAVKSELVNAAKKVRIDGFRKGKVPMNVVAQRYGASVRQDVLGDLMQRNFVDAIIKEKINPVGAPNYTPGEYAVGGDFTYTVEFDVYPEVELKGLEAIEVEKPVVEVTDADVDTMLDT
type: DOMAIN
name: Trigger_fac_ribosome-bd_bac
description: Trigger factor, ribosome-binding, bacterial

phrase: RAATAEDRATIDFTGSIDGEVFEGGKASDFVLAMGQSRMIPGFEDGIVGHKAGEEFTINVNFPEDYHAENLKGKAAQFVI
type: DOMAIN
name: PPIase_FKBP_dom
description: FKBP-type peptidyl-prolyl cis-trans isomerase domain
Protein sequence:
MNENLFTSFITPTMMGLPIVILVIVFPAMLYPSPNRLINNRLISIQQWLVQLILKQMLLIHNSKGRTWALMLISLILFIGSTNLLGLVPYTFTPTTQLSMNLGMAIPLWAGAVITGFRHKAKASLAHFLPQGTPITLIPMLVVIETISLFIQPMALAIRLTANITAGHLLMHLIGGAVLALTSISPAAATITFIILLLLTILEFAVALIQAYVFTLLVSLYLHDNT

Annotated regions:
phrase: ALAIRLTAN
type: ACTIVE_SITE
name: ATP_synth_F0_asu_AS
description: ATP synthase, F0 complex, subunit A, active site
Protein sequence:
MDIKEAGPFPVKKEQFRMTVNGQAWEVAAVPTTHLSDLLRKEFQLTGTKVSCGIGRCGACSILIDGKLANACMTMAYQADGHSITTIEGLQKEELDMCQTAFLEEGGFQCGYCTPGMIIALKALFRETPQPSDKDIEEGLAGNLCRCTGYGGIMRSACRIRRELNGGRRESGF

Annotated regions:
phrase: TVNGQAWEVAAVPTTHLSDLLRKEFQLTGTKVSCGIGRCGACSILIDGK
type: DOMAIN
name: 2Fe-2S_ferredoxin-type
description: 2Fe-2S ferredoxin-type iron-sulfur binding domain

phrase: EQFRMTVNGQAWEVAAVPTTHLSDLLRKEFQLTGTKVSCGIGRCGACSILIDGKLANACMTMAYQADGHSITTIEG
type: DOMAIN
name: 2Fe-2S_ferredoxin-type
description: 2Fe-2S ferredoxin-type iron-sulfur binding domain

phrase: CGIGRCGA
type: BINDING_SITE
name: 2Fe2S_fd_BS
description: 2Fe-2S ferredoxin, iron-sulphur binding site

phrase: TIEGLQKEELDMCQTAFLEEGGFQCGYCTPGMIIALKALFRETPQPSDKDIEEGLAGNLCRCTGYGGIMR
type: DOMAIN
name: 2Fe-2S-bd
description: [2Fe-2S]-binding
Protein sequence:
MSIRHATLHQLKIFAAVARHMSFARAAEELHLTPPALSIQVRQLAEAVGQPLFDQIGKKIYLTAAGEALTSACHDILDRLEYFTQEIAALQGLEKGSLKVATLSTTKYFIPRMLGGFCTEHPGVATVLFIGNREVLLERLARNQDDLYILGQPPEHMNVVAEAFADNPLVVVARLDHPLTQEKDIEPSRLRDVPFILREPGSGTRLAAEKFFEQHGVILKTRMEFGSNEAVKQSVAGGLGITVLSASTIRAELASGKLAILDVRGFPLERKWYAVYPAGKRISPRTKAFMEYLFAASADGENGPSLPKP

Annotated regions:
phrase: LHQLKIFAAVARHMSFARAAEELHLTPPALSIQVRQLAEAVGQPLFDQIGKKIYLTAAG
type: DOMAIN
name: Tscrpt_reg_HTH_LysR
description: Transcription regulator HTH, LysR

phrase: GLEKGSLKVATLSTTKYFIPRMLGGFCTEHPGVATVLFIGNREVLLERLARNQDDLYILGQPPEHMNVVAEAFADNPLVVVARLDHPLTQEKDIEPSRLRDVPFILREPGSGTRLAAEKFFEQHGVILKTRMEFGSNEAVKQSVAGGLGITVLSASTIRAELASGKLAILDVRGFPLERKWYAVYPAGKRISPRTKAFMEYL
type: DOMAIN
name: LysR_subst-bd
description: LysR, substrate-binding

phrase: FARAAEELHLT
type: DOMAIN
name: Tscrpt_reg_HTH_LysR
description: Transcription regulator HTH, LysR

phrase: PPALSIQVRQ
type: DOMAIN
name: Tscrpt_reg_HTH_LysR
description: Transcription regulator HTH, LysR

phrase: LAEAVGQPLFD
type: DOMAIN
name: Tscrpt_reg_HTH_LysR
description: Transcription regulator HTH, LysR

phrase: TLHQLKIFAAVARHMSFARAAEELHLTPPALSIQVRQLAEAVGQPLFDQIGKKIYL
type: DOMAIN
name: Tscrpt_reg_HTH_LysR
description: Transcription regulator HTH, LysR
Protein sequence:
MSKQFGKVGVLYGGRSAEREVSLMSGKGVHEALLSAGVDAHLFDTGERSLADLAAAGFERVFIALHGRYGEDGTLQGALELLGIPYTGSGPLASSLSMDKIMTKRVWLQHGLPTPAFEVLGGSTELRLVPDRLGLPLILKPPHEGSTVGITKVAGYSDMKAAYELAARFDAEVLAEQFITGRELTVAVLGSGAAARALPVIEIVAPGGNYDYEHKYFSDDTQYFCPADLPADVAADVAAVAERAYAALGCEGWGRVDFILDRENRPWLLEMNTSPGMTGHSLVPMAARAVGMSYADLCVAILAEAACKVRSPARQD

Annotated regions:
phrase: AGFERVFIALHGRYGEDGTLQGALELLGIPYTG
type: DOMAIN
name: Dala_Dala_lig_N
description: D-alanine--D-alanine ligase, N-terminal domain

phrase: QHGLPTPAFEVLGGSTELRLVPDRLGLPLILKPPHEGSTVGITKVAGYSDMKAAYELAARFDAEVLAEQFITGRELTVAVLGSGAAARALPVIEIVAPGGNYDYEHKYFSDDTQYFCPADLPADVAADVAAVAERAYAALGCEGWGRVDFILDRENRPWLLEMNTSPGMTGHSLVPMAARAVGMSYADLCVAI
type: DOMAIN
name: Dala_Dala_lig_C
description: D-alanine--D-alanine ligase, C-terminal

phrase: HGRYGEDGTLQ
type: CONSERVED_SITE
name: D-Ala_lig_Van_CS
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site

phrase: LGCEGWGRVDFILDRENRPWLLEMNTSP
type: CONSERVED_SITE
name: D-Ala_lig_Van_CS
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site

phrase: KRVWLQHGLPTPAFEVLGGSTELRLVPDRLGLPLILKPPHEGSTVGITKVAGYSDMKAAYELAARFDAEVLAEQFITGRELTVAVLGSGAAARALPVIEIVAPGGNYDYEHKYFSDDTQYFCPADLPADVAADVAAVAERAYAALGCEGWGRVDFILDRENRPWLLEMNTSPGMTGHSLVPMAARAVGMSYADLCVAIL
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold
Protein sequence:
MIRLQAIRRSRVEKSDGKNAYWCVVSGSDLWLVDGQIPYGSAEQWDLPQEKAILVDRYQNSPVYWLNAADIEQDRPLTSLRELLGVDEALFLAASKAVQYGHMSQTIRFCPQCGGRNYLNHQQLAMQCHDCRTLHYPRIFPCIIVAVRKQQQILLAQHPRHRNGMYTVIAGFVEVGETLEQCVAREVLEETGIVVTNIRYFGSQPWAFPSSMMMAFLADYDTGELKPDYSELSDANWFGIENLPPVAPRGTIARALIEQTLADIAQDQA

Annotated regions:
phrase: GFVEVGETLEQCVAREVLEET
type: CONSERVED_SITE
name: NUDIX_hydrolase_CS
description: NUDIX hydrolase, conserved site

phrase: PCIIVAVRKQQQILLAQHPRHRNGMYTVIAGFVEVGETLEQCVAREVLEETGIVVTNIRYFGSQPWAFPSSMMMAFLADYDTGELKPDYSELSDANWFGIENLPPVAPRGTIARALI
type: DOMAIN
name: NudC-like_C
description: NADH pyrophosphatase-like, C-terminal domain

phrase: IVAVRKQQQILLAQHPRHRNGMYTVIAGFVEVGETLEQCVAREVLEETGIVVTNIRYFGSQPWAFPSSMMMAFLADYDTGELKPDYSELSDANWFGIENLP
type: DOMAIN
name: NUDIX_hydrolase_dom
description: NUDIX hydrolase domain

phrase: RFCPQCGGRNYLNHQQLAMQCHDCRTLH
type: DOMAIN
name: Znr_NADH_PPase
description: Zinc ribbon, NADH pyrophosphatase

phrase: PRIFPCIIVAVRKQQQILLAQHPRHRNGMYTVIAGFVEVGETLEQCVAREVLEETGIVVTNIRYFGSQPWAFPSSMMMAFLADYDTGELKPDYSELSDANWFGIENLPPVAPRGTIARALIEQ
type: DOMAIN
name: NUDIX_hydrolase_dom
description: NUDIX hydrolase domain
Protein sequence:
MAAAKAEMQLLPSLQMSDPFASFPHSPPTMDSNYPKLEEMMLLSGGGPQFLSPTGAPENSGFNPSGEPGEQHFEHLAADTFPEISLSSEKPLVETSFPSQTTRLPPITYTGRFSLEPASNSSNTLWPEPLFSLVSGLVGMANPPVASTPSSSPSSSVTSSSSSSPALSCSVQASENSPIYSAAPTFPNSSSEIFQDTQHQPFPGAPGLSLQFPPPAYPSAKSNFQVPMIPDYLFPQQQQQPGELGLSPAEHKPFSSLEAARPQQPSLTPLSTIKAFATQTGSQELKPLSSGGGGVSYQAQLVKPSRMRKYPNRPSKTPPHERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQKDKKAEKVPPASCSSAASPLPAYPSPAAASYPSPVPTSYSPPVSSPYPSPAHTTFPSPTVATTYPSITATFHSQAAANPFSSAGGISSFSSQVTSVLSDMAATFSPRTIEIC

Annotated regions:
phrase: YACPVESCDRRFSRSDELTRHIRIHTGQK
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: GRFSLEPASNSSNTLWPEPLFSLVSGLVGMANPPVASTPSSSPSSSVTSSSSSSPALSCSVQASENSPIYSAAPTFPNSSSEIFQDTQHQPFPGAPGLSLQFP
type: DOMAIN
name: EGR_N
description: Early growth response, N-terminal

phrase: CDICGRKFARSDERKRHTKI
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: FACDICGRKFARSDERKRHTKIHLRQK
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: CRICMRNFSRSDHLTTHIRT
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: FQCRICMRNFSRSDHLTTHIRTHTGEK
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: CSSAASPLPAYPSPAAASYPSPVPTSYSPPVSSPYPSPAHTTFPSPTVATTYPSITATFHSQAAANPFSSAGGISSFSSQVTSVLS
type: REPEAT
name: EGR1_C
description: Early growth response protein 1, C-terminal

phrase: YACPVESCDRRFSRSDELTRHIRI
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: FACDICGRKFARSDERKRHTKI
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: FQCRICMRNFSRSDHLTTHIRT
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: YACPVESCDRRFSRSDELTRHIRI
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: FQCRICMRNFSRSDHLTTHIRT
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: FACDICGRKFARSDERKRHTKI
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: CPVESCDRRFSRSDELTRHIRI
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type
Protein sequence:
MSPQTETKANVGFKAGVKEYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVPGEETQFIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALAALRLEDLRIPPAYTKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRLSGGDHVHAGTVVGKLEGDRESTLGFVDLLRDDYVEKDRSRGIFFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAIEGNTIIREACKWSPELAAACEVWKEIRFNFPTVDTLDTQE

Annotated regions:
phrase: GLDFTKDD
type: ACTIVE_SITE
name: RuBisCo_large_chain_AS
description: Ribulose bisphosphate carboxylase, large chain, active site

phrase: GIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRLSGGDHVHAGTVVGKLEGDRESTLGFVDLLRDDYVEKDRSRGIFFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAIEGNTIIREACKWSPELAAACEV
type: DOMAIN
name: RuBisCO_lsu_C
description: Ribulose bisphosphate carboxylase, large subunit, C-terminal

phrase: YYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVPGEETQFIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALAALRLEDLRIPPA
type: DOMAIN
name: RuBisCO_lsu_fd_N
description: Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal
Protein sequence:
METVSVLLFFFLFLLAAEARSTKRTGCKDFTCGEHDFKFPFFRTDMPSRCGLFKLNCSANIPEIQLEKDGKWYTVKSVSQANTITIIDPRLNQSLTTGGCSDLSSFSLPDSPWLKLNTLYKCNNSSRKNGFSYANCRGEGSSLYYNLGDDHDVSGCSPIKTPESWVTPKNGNLSDVNATFSLHIELPGNCFRCHNNGGECTKVKNNYRCVGANTEPNNYHAEMRLGLGIGGSVILIIILVALFAVIHRNYRRKDGSELSRDNSKSDVEFSQVFFKIPIFSYKELQAATDNFSKDRLLGDGGFGTVYYGKVRDGREVAVKRLYEHNYRRLEQFMNEIEILTRLHHKNLVSLYGCTSRRSRELLLVYEFIPNGTVADHLYGENTPHQGFLTWSMRLSIAIETASALAYLHASDIIHRDVKTTNILLDRNFGVKVADFGLSRLLPSDVTHVSTAPQGTPGYVDPEYHRCYHLTDKSDVYSFGVVLVELISSKPAVDISRCKSEINLSSLAINKIQNHATHELIDQNLGYATNEGVRKMTTMVAELAFQCLQQDNTMRPTMEQVVHELKGIQNEEQKCPTYDYREETIIPHPSPPDWGEAALLKNMKFPRSPVSVTDQWTSKSTTPNTSAYEF

Annotated regions:
phrase: FSKDRLLGDGGFGTVYYGKVRDGREVAVKRLYEHNYRRLEQFMNEIEILTRLHHKNLVSLYGCTSRRSRELLLVYEFIPNGTVADHLYGENTPHQGFLTWSMRLSIAIETASALAYLHASDIIHRDVKTTNILLDRNFGVKVADFGLSRLLPSDVTHVSTAPQGTPGYVDPEYHRCYHLTDKSDVYSFGVVLVELISSKPAVDISRCKSEINLSSLAINKIQNHATHELIDQNLGYATNEGVRKMTTMVAELAFQCLQQDNTMRPTMEQVVHEL
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: IIHRDVKTTNIL
type: ACTIVE_SITE
name: Ser/Thr_kinase_AS
description: Serine/threonine-protein kinase, active site

phrase: FSKDRLLGDGGFGTVYYGKVRDGREVAVKRLYEHNYRRLEQFMNEIEILTRLHHKNLVSLYGCTSRRSRELLLVYEFIPNGTVADHLYGENTPHQGFLTWSMRLSIAIETASALAYLHASDIIHRDVKTTNILLDRNFGVKVADFGLSRLLPSDVTHVSTAPQGTPGYVDPEYHRCYHLTDKSDVYSFGVVLVELISSKPAVDISRCKSEINLSSLAINKIQNHATHELIDQNLGYATNEGVRKMTTMVAELAFQCLQQDNTMRPTMEQVVHEL
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: LGDGGFGTVYYGKVRDGREVAV
type: BINDING_SITE
name: Protein_kinase_ATP_BS
description: Protein kinase, ATP binding site

phrase: CKDFTCGEHDFKFPFFRTDMPSRCGLFKLNCSANIPEIQLEKDGKWYTVKSVSQANTITII
type: DOMAIN
name: WAK_GUB
description: Wall-associated receptor kinase, galacturonan-binding domain

phrase: DRLLGDGGFGTVYYGKVRDGREVAVKRLYEHNYRRLEQFMNEIEILTRLHHKNLVSLYGCTSRRSRELLLVYEFIPNGTVADHLYGENTPHQGFLTWSMRLSIAIETASALAYLHASDIIHRDVKTTNILLDRNFGVKVADFGLSRLLPSDVTHVSTAPQGTPGYVDPEYHRCYHLTDKSDVYSFGVVLVELISSKPAVDISRCKSEINLSSLAINKIQNHATHELIDQNLGYATNEGVRKMTTMVAELAFQCLQQDNTMRPTMEQVVHE
type: DOMAIN
name: Ser-Thr/Tyr_kinase_cat_dom
description: Serine-threonine/tyrosine-protein kinase, catalytic domain
Protein sequence:
MFRWSWCRLIISKVSAESYVDYLQNSDRELPALSEIFPRHGTGTGELVKFHSLLCEAMKDHNFNYVGIKVVPPTSPPLQCLRATEPVCVPIFSNSFQGSVFSAKQHRIQFVEPLFVIRLGRDPPTQLTANTVPAVCDAFFPGVEFVGSRYPFYPPHTTGFAADLGGCVAVHLGEAVSLGSASLESLGDTNFVVTRREEPIQVGAGKNCLGGPGAAVALAVSYAASMGWPLREKHYIFCSGVGSRSPALAGEYKVNYGAYGSVSASLT

Annotated regions:
Protein sequence:
MKEEVLGLPIEKIQEKIKEYDFSPRISNIGYVKSVGDGVAQVSLLNAAFVGEIVIFESGIQGMVLSLKEDSVGVILFGRDEYVKEGEVVYSTGKILQVPTGSGFLGRVIDPLGNPIDGGGLIFPEAYVPVDNEAPSIFDREPVKEPLYTGIRAIDALIPIGHGQRELILGDRQTGKTTIAIDTIISQRNYGTICIYVAIAQKRTNIARIVQTLREYGALSNTIVIATFPDDPPALRYIAPMAGCAMGEYFMRQGERVLIVYDDLTKHANTYREVALLLRRVPGREAYPGDIFYLHSHLLERAAKLSRKLGGGALTALPIAETLAGEISTYIPTNLISITDGQIYLDTALFNAGVRPAINVGLSVSRVGGSAQPKGMRQVAGRLRLDLAQYREYAMFLEFGTELDMATKKKIERGRRIEELLKQGAHEVQSVEEQIITFYLANGGFLDNYPVEKVKDVVIKYIAYLKLKYSSVLTLLREQLELSDQIIYQIHNIFQEFEREVYANPSNPQA

Annotated regions:
phrase: PAINVGLSV
type: ACTIVE_SITE
name: ATPase_a/bsu_AS
description: ATPase, alpha/beta subunit, nucleotide-binding domain, active site

phrase: SNIGYVKSVGDGVAQVSLLNAAFVGEIVIFESGIQGMVLSLKEDSVGVILFGRDEYVKEGEVVYST
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_N
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain

phrase: ILQVPTGSGFLGRVIDPLGNPIDGGGLIFPEAYVPVDNEAPSIFDREPVKEPLYTGIRAIDALIPIGHGQRELILGDRQTGKTTIAIDTIISQRNYGTICIYVAIAQKRTNIARIVQTLREYGALSNTIVIATFPDDPPALRYIAPMAGCAMGEYFMRQGERVLIVYDDLTKHANTYREVALLLRRVPGREAYPGDIFYLHSHLLERAAKLSRKLGGGALTALPIAETLAGEISTYIPTNLISITDGQIYLDTALFNAGVRPAINVGLSVSRV
type: DOMAIN
name: ATP_synth_F1_a_nt-bd_dom
description: ATP synthase, F1 complex, alpha subunit nucleotide-binding domain

phrase: GIRAIDALIPIGHGQRELILGDRQTGKTTIAIDTIISQRNYGTICIYVAIAQKRTNIARIVQTLREYGALSNTIVIATFPDDPPALRYIAPMAGCAMGEYFMRQGERVLIVYDDLTKHANTYREVALLLRRVPGREAYPGDIFYLHSHLLERAAKLSRKLGGGALTALPIAETLAGEISTYIPTNLISITDGQIYLDTALFNAGVRPAINVGLSV
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_nucl-bd
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain

phrase: QPKGMRQVAGRLRLDLAQYREYAMFLEFGTELDMATKKKIERGRRIEELLKQGAHEVQSVEEQIITFYLANGGFLDNYPVEKVKDVVIKYIAYLKLKYSSVLTLLREQLELSDQIIYQIHNIFQE
type: DOMAIN
name: ATP_synth_asu_C
description: ATP synthase, alpha subunit, C-terminal

phrase: MRQVAGRLRLDLAQYREYAMFLEFGTELDMATKKKIERGRRIEELLKQGAHEVQSVEEQIITFYLANGGFLDNYPVEKVKDVVIKYIAYLKLKYSSVLTLLREQLELSDQIIYQIHNIFQE
type: DOMAIN
name: ATP_synth_asu_C
description: ATP synthase, alpha subunit, C-terminal
Protein sequence:
MKNFILLAVSSILLVDLFPTHCGHNVDLSKAINLNGVNFNNVDASSLGAAHVGQSASRGRGLGENPDDEEGDAKKKKDGKKAEPKNPRENKLKQPGDRADGQPAGDRADGQPAGDRADGQPAGDRAAGQPAGDRADGQPAGDRADGQPAGDRADGQPAGDRADGQPAGDRAAGQPAGDRAAGQPAGDRADGQPAGDRAAGQPAGDRADGQPAGDRAAGQPAGDRADGQPAGDRAAGQPAGDRAAGQPAGDRAAGQPAGDRAAGQPAGNGAGGQAAGGNAGGGQGQNNEGANAPNEKSVKEYLDKVRATVGTEWTPCSVTCGVGVRVRRRVNAANKKPEDLTLNDLETDVCTMDKCAGIFNVVSNSLGLVILLVLALFN

Annotated regions:
phrase: TEWTPCSVTCGVGVRVRRRVNAANKKPEDLTLNDLETDVCTMDKC
type: REPEAT
name: TSP1_rpt
description: Thrombospondin type-1 (TSP1) repeat

phrase: GTEWTPCSVTCGVGVRVRRRVNAANKKPEDLTLNDLETDVCTMDK
type: REPEAT
name: TSP1_rpt
description: Thrombospondin type-1 (TSP1) repeat

phrase: ATVGTEWTPCSVTCGVGVRVRRRVNAANKKPEDLTLNDLETDVCTMDKC
type: REPEAT
name: TSP1_rpt
description: Thrombospondin type-1 (TSP1) repeat
Protein sequence:
MTHLSDLDIANQATIKPISEIAEKIGIPEDALEQYGHYKAKIDINKLDDKGDRGKVVLVTAMSPTPAGEGKSTVTVGLADAFHELGENVMMALREPALGPVFGIKGGATGGGYAQVLPMEDINLHFNGDFHAITTANNALAAFIDNHIHQGNELGIDQRRIEWKRVLDMNDRELRKVVVGLGGPTQGVPREDGFNITVASEIMTILCLSTGLKDLKASIANITIGYTRDRKPVTVADLKVEGALAMILKDAIKPNLVQSIEGTPALIHGGPFANIAHGCNSIIATETARKLADIVVTEAGFGSDLGAEKFMNIKARKAGFEPSAAVVVATIRALKMHGGVAKDDLKEENVQAVRDGLANLERHIENIRSFGVEPVVALNAFVSDTEAEEQVVEDWAKEHGVRIALTEVWEKGGKGGVELAKQVQEVLNEKHDFKHTYDLDLPIEEKIEKVVTNIYGGNKVTFTSGALKQLKQIKENGWDNYPVCMAKTQYSFTDDKDRLGAPDDFEITIRELQPKTGAGFIVALTGAIMTMPGLPKKPAALNMDVTEDGHAKGLF

Annotated regions:
phrase: VATIRALKMHG
type: CONSERVED_SITE
name: Formate_THF_ligase_CS
description: Formate-tetrahydrofolate ligase, FTHFS, conserved site

phrase: GIKGGATGGG
type: CONSERVED_SITE
name: Formate_THF_ligase_CS
description: Formate-tetrahydrofolate ligase, FTHFS, conserved site