nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTTNTVVREAQSQAEYNPLAKQKAAAKLSRIPIKVEHGEALKKPDWIRVKAGSPTTRFYEIKDILRANKLHTVCEEASCPNIGECFGKGTATFMIMGDKCTRRCPFCDVGHGRPDPLDTNEPLNLAKTIAELRLKYVVITSVDRDDLRDGGSGHFVECIKNIRELSPLTQIEILVPDFRGRDDRALEILKAAPPDVMNHNLETAPRLYKEARPGSDYQFSLNLLKKFKALHPKVPTKSGIMVGLGETDEEILQVMRDMRAHDIDMLTIGQYLAPSNSHLPVRRYVHPDTFKMFEEEAYKMGFTHAAVGAMVRSSYHADQQAHAAGV

Annotated regions:
phrase: PIKVEHGEALKKPDWIRVKAGSPTTRFYEIKDILRANKLHTVCEEAS
type: DOMAIN
name: LIAS_N
description: Lipoyl synthase, N-terminal

phrase: HGEALKKPDWIRVKAGSPTTRFYEIKDILRANKLHTVCEEASCPNIGECFGKGTATFMIMGDKCTRRCPFCDVGHGRPDPLDTNEPLNLAKTIAELRLKYVVITSVDRDDLRDGGSGHFVECIKNIRELSPLTQIEILVPDFRGRDDRALEILKAAPPDVMNHNLETAPRLYKEARPGSDYQFSLNLLKKFKALHPKVPTKSGIMVGLGETDEEILQVMRDMRAHDIDMLTIGQYLAPSNSHLPVRRYVHPDTFKMFEEEAYKMGFTHAAVGAMVRSSYHADQQAH
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: MIMGDKCTRRCPFCDVGHGRPDPLDTNEPLNLAKTIAELRLKYVVITSVDRDDLRDGGSGHFVECIKNIRELSPLTQIEILVPDFRGRDDRALEILKAAPPDVMNHNLETAPRLYKEARPGSDYQFSLNLLKKFKALHPKVPTKSGIMVGLGETDEEILQVMR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TATFMIMGDKCTRRCPFCDVGHGRPDPLDTNEPLNLAKTIAELRLKYVVITSVDRDDLRDGGSGHFVECIKNIRELSPLTQIEILVPDFRGRDDRALEILKAAPPDVMNHNLETAPRLYKEARPGSDYQFSLNLLKKFKALHPKVPTKSGIMVGLGETDEEILQVMRDMRAHDIDMLTIGQYLAPSNSHLPVRRYVHPDTFKMFEEEA
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: CFGKGTATFMIMGDKCTRRCPFCDVGHGRPDPLDTNEPLNLAKTIAELRLKYVVITSVDRDDLRDGGSGHFVECIKNIRELSPLTQIEILVPDFRGRDDRALEILKAAPPDVMNHNLETAPRLYKEARPGSDYQFSLNLLKKFKALHPKVPTKSGIMVGLGETDEEILQVMRDMRAHDIDMLTIGQYLAPSNSHLPVRRYVHPDTFKMFEEEAYKMGF
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MVAYSPIIATYGNRAEQFLETDSDFAKYHAKLNKKLQHLRSRCHLVTKDTKKYSSKNKYGEINSEDYDNKTKLIGVLILLHAERDLALAETLKLRARQRGKLKKSEEKVLSTRLKKACKTADKLVNVTQNEQQWITRAQYLAFAKLVHSEYLINGKRFKRKDNAKISNNLALVFAALEHLKNLSLLAEEVVDNIVNKYQYSLKQYAGNLITTPEINNFIVERVQSDENKDDELVKLLLDNGFNMKKITTSTEDQKVTTNINWRSFNAKIIDAEVAQFLEQGLSIHPTQITQYTQRLSKLEKALDRHEFFIANHDDQDDIDEMVENSSENNQIILAYIKYNILLTSISRERDLFTHLWNQWLKLNTSLPSKLTKYKEMERIVKNLTKYLSDIMELPGVYSDDELLSQLDLCKLYFQLFLNTGCLSVLYQSKGRYMEALALYVDAYRRLENKLSEIESLDEILLPANLLSLNSVRSLQKRIENGGNSVITLAEYEKRNHGGSLGKYDLTVIEKLDSKKILPTDIQLKNLFPLKPKMLPIPSKPTLFDLAFNYITYDKQEPSASQVKDSVTETESISQTPISNEQTEGEPKKKRGFLGLFGR

Annotated regions:
phrase: SPIIATYGNRAEQFLETDSDFAKYHAKLNKKLQHLRSRCHLVTKDTKKYSSKNKYGEINSEDYDNKTKLIGVLILLHAERDLALAETLKLRARQRGKLKKSEEKVLSTRLKKACKTADKLVNVTQNEQQWITRAQYLAFAKLVHSEYLINGKRFKRKDNAKISNNLALVFAALEHLKNLSLLAEEVVDNIVNKYQYSLKQY
type: DOMAIN
name: SRP68-RBD
description: Signal recognition particle subunit SRP68, RNA-binding domain
Protein sequence:
MDVNPTLLFLKVPAQNAISTTFPYTGDPPYSHGTGTGYTMDTVNRTHQYSEKGKWTTNTETGAPQLNPIDGPLPEDNEPSGYAQTDCVLEAMAFLEESHPGIFENSCLETMEVVQQTRVDKLTQGRQTYDWTLNRNQPAATALANTIEVFRSNGLTANESGRLIDFLKDVMESMDKEGMEITTHFQRKRRVRDNMTKKMVTQRTIGKKKQRLNKRSYLIRALTLNTMTKDAERGKLKRRAIATPGMQIRGFVYFVETLARSICEKLEQSGLPVGGNEKKAKLANVVRKMMTNSQDTELSFTITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNVLSIAPIMFSNKMARLGKGYMFESKSMKLRTQIPAEMLANIDLKYFNESTRKRIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLGVSILNLGQKRYTRTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKKKSYINRTGTFEFTSFFYRYGFVANFSMELPSFGVSGINESADMSIGVTVIKNNMINNDLGPATAQMALQLFIKDYRYTYRCHRGDTQIQTRRSFELKKLWEQTRSKAGLLVSDGGPNLYNIRNLHIPEVCLKWELMDEDYQGRLCNPLNPFVSHKEIESVNNAVVMPAHGPAKSMEYDAVATTHSWIPKRNRSILNTSQRGILEDEQMYQKCCNLFEKFFPSSSYRRPVGISSMVEAMVSRARIDARIDFESGRIKKEEFAEIMKICSTIEEFRRQK

Annotated regions:
phrase: VRKMMTNSQDTELSFTITGDNTKWNENQNPRMFLAMITYITRNQPEWFRNVLSIAPIMFSNKMARLGKGYMFESKSMKLRTQIPAEMLANIDLKYFNESTRKRIEKIRPLLIDGTASLSPGMMMGMFNMLSTVLGVSILNLGQKRYTRTTYWWDGLQSSDDFALIVNAPNHEGIQAGVDRFYRTCKLVGINMSKKKS
type: DOMAIN
name: RNA-dir_pol_NSvirus
description: RNA-directed RNA polymerase, negative-strand RNA virus
Protein sequence:
MGIHDLSKVIADKAPDAIKETEIKNLFDRKVAIDASMSIYQFLIAIRSEGSNLVNEAGEATSHLSGLFYRTIRMVNHGIKPLYVFDGKPPTMKSGELLKRGARRKEAQANLEEATEQGDTEQMEKFSRRLVHVTREHNEQCRQLLTLMGIPFIIAPTEAEAQCAELVKGGKVFATATEDMDALTFGTTVLLRHMTFSEARKMPIQEFRLQKGGLEMSMEEFIDMCILLGCDYCDSIKGIGRQKAYQLIKEHKNIETVLKHLDPKKYVIPEDWHFAEARELFLRPDVTPAAECEFKWTTPDIDGLVKFMCQENGFAEDRIRKSAEKLVKARKGGQQGRLDSFFTAIPSGSAKRNTVGLLPKPGPPPFLF

Annotated regions:
phrase: IKPLYVFDGKPPTM
type: CONSERVED_SITE
name: XPG_CS
description: XPG conserved site

phrase: MGIHDLSKVIADKAPDAIKETEIKNLFDRKVAIDASMSIYQFLIAIRSEGSNLVNEAGEATSHLSGLFYRTIRMVNHGIKPLYVFDGKPPTMKSGELLKRGARRKE
type: DOMAIN
name: XPG_DNA_repair_N
description: XPG, N-terminal

phrase: MGIHDLSKVIADKAPDAIKETEIKNLFDRKVAIDASMSIYQFLIAIRSEGSNLVNEAGEATSHLSGLFYRTIRMVNHGIKPLYVFDGKPPTMKSGELLKRGARRKE
type: DOMAIN
name: XPG_DNA_repair_N
description: XPG, N-terminal

phrase: GIPFIIAPTEAEAQCAELVKGGKVFATATEDMDALTFGTTVLLRHMTFSEARKMPIQEFRLQKGGLEMSMEEFIDMCILLGC
type: DOMAIN
name: XPG-I_dom
description: XPG-I domain

phrase: MEEFIDMCILLGCDYCDSIKGIGRQKAYQLIKE
type: CONSERVED_SITE
name: HhH2
description: Helix-hairpin-helix motif, class 2

phrase: GIPFIIAPTEAEAQ
type: CONSERVED_SITE
name: XPG_CS
description: XPG conserved site

phrase: TLMGIPFIIAPTEAEAQCAELVKGGKVFATATEDMDALTFGTTVLLRHMTFSEARKMPIQEFRLQKGGLEMS
type: DOMAIN
name: XPG-I_dom
description: XPG-I domain
Protein sequence:
MLARAPPPYFNFPARNNTICNRNEIVRLFRNGGGVVARGAGFTRRPLETSSSYDDSTDDGFVIISAADKENEFAPPPSSDLLSSIPSESARRNGSRSRGLTASFGRLKAQKVKALVGKVTQKKQHMSHNEEEDEDDASDENYSADEGFGSSSILDLMRKKLAMKAIPRSGKSAERNEVKRASKVRESRESRRDLDRLEGDDEDVDEVSNPDRFTDNQRAGSRSSYSKGGYAANSRGKGDRLSVARDLDSFEGHGRAIDEVSNPRKFNDNERAESRSSYSRDSSANSRGREDRRFVAKELDTFQGRDKAYDEVYNPRRFTDNERGLRGGSHSKGSDTNSRGWGDRRSVVYTRDMDDWRERNKTKDTRETGFFSRKTFAEIGCSEDMMKALKEQNFDRPAHIQAMAFSPVIDGKSCIIADQSGSGKTLAYLVPVIQRLREEELQGHSKSSPGCPRVIVLVPTAELASQVLANCRSISKSGVPFRSMVVTGGFRQRTQLENLEQGVDVLIATPGRFTYLMNEGILGLSNLRCAILDEVDILFGDDEFEAALQNLINSSPVTAQYLFVTATLPLEIYNKLVEVFPDCEVVMGPRVHRVSNALEEFLVDCSGDDNAEKTPETAFQNKKTALLQIMEENPVSKTIIFCNKIETCRKVENIFKRVDRKERQLHVLPFHAALSQESRLTNMQEFTSSQPEENSLFLVCTDRASRGIDFSGVDHVVLFDFPRDPSEYVRRVGRTARGARGKGKAFIFVVGKQVGLARRIIERNEKGHPVHDVPNAYEFTT

Annotated regions:
phrase: KTFAEIGCSEDMMKALKEQNFDRPAHIQ
type: DOMAIN
name: RNA_helicase_DEAD_Q_motif
description: RNA helicase, DEAD-box type, Q motif

phrase: FSPVIDGKSCIIADQSGSGKTLAYLVPVIQRLREEELQGHSKSSPGCPRVIVLVPTAELASQVLANCRSISKSGVPFRSMVVTGGFRQRTQLENLEQGVDVLIATPGRFTYLMNEGILGLSNLRCAILDEVDILFGDDEFEAALQNLINSSPVTAQYLFVTATLPLEIYNKLVEVFPDCEV
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: NFDRPAHIQAMAFSPVIDGKSCIIADQSGSGKTLAYLVPVIQRLREEELQGHSKSSPGCPRVIVLVPTAELASQVLANCRSISKSGVPFRSMVVTGGFRQRTQLENLEQGVDVLIATPGRFTYLMNEGILGLSNLRCAILDEVDILFGDDEFEAALQNLINSSPVTAQYLFVTATLPLEIYNKLVEVFPDCEVVMGPRVHRVSNALEE
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: RKVENIFKRVDRKERQLHVLPFHAALSQESRLTNMQEFTSSQPEENSLFLVCTDRASRGIDFSGVDHVVLFDFPRDPSEYVRRVGRTARG
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: KKTALLQIMEENPVSKTIIFCNKIETCRKVENIFKRVDRKERQLHVLPFHAALSQESRLTNMQEFTSSQPEENSLFLVCTDRASRGIDFSGVDHVVLFDFPRDPSEYVRRVGRTA
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: HIQAMAFSPVIDGKSCIIADQSGSGKTLAYLVPVIQRLREEELQGHSKSSPGCPRVIVLVPTAELASQVLANCRSISKSGVPFRSMVVTGGFRQRTQLENLEQGVDVLIATPGRFTYLMNEGILGLSNLRCAILDEVDILFGDDEFEAALQNLINSSPVTAQYLFVTATLPL
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: NKKTALLQIMEENPVSKTIIFCNKIETCRKVENIFKRVDRKERQLHVLPFHAALSQESRLTNMQEFTSSQPEENSLFLVCTDRASRGIDFSGVDHVVLFDFPRDPSEYVRRVGRTARGARGKGKAFIFVVGKQVGLARRIIERNEKGHPVHDVPNAYEFT
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like
Protein sequence:
MKTLLRPAVSLFVLLTAVTGVVYPLAVTGIAKVTFPEAADGSLIVKDGKTVGSSLIGQNFSDPKYFWGRPSATSPMPYNASSSSGSNQGPLNPALVDAVKVRIEALKAADPDNKLPIPADLVNASASGLDPHISPEAAAYQVTRVAGQRHLLPADVKALVSQHTEGRQWGVFGEPRVNVLQLNIALDSVSK

Annotated regions:
Protein sequence:
MSKKCVVVAGGTGGHIFPGIAVADYLKQQGWQVSWIGTPDRMEATVVPKHNIDINFINVKGVRGNGIKRLIKAPFMVLNAILQARKVLKSEKPDVVLAMGGYVTGPTGIAAKSLGIPLVIHEQNAIAGMSNKWLAKFANRVLAAFPSAFATGQAELVGNPVRESVANIAVREVSSPINILVVGGSLGAQVLNTTLPAAFAELGNTNAISVWHQTGKGHLGSVEAAYKSHKFSTENTKVAEFIDDIDTAYGWADIVICRSGALTVSEIATAGKMAVFVPFPHAVDDHQTANAQYLVVANGALLMPQGQFNQQSIVALLSPYLAKPSLIKEMAANAKQQAILDATASVAMHCEQVTNKRA

Annotated regions:
phrase: VVVAGGTGGHIFPGIAVADYLKQQGWQVSWIGTPDRMEATVVPKHNIDINFINVKGVRGNGIKRLIKAPFMVLNAILQARKVLKSEKPDVVLAMGGYVTGPTGIAAKSLGIPLVIHEQNAIAGMSNKWLAKFANRV
type: DOMAIN
name: GlycoTrans_28_N
description: Glycosyltransferase family 28, N-terminal domain

phrase: ILVVGGSLGAQVLNTTLPAAFAELGNTNAISVWHQTGKGHLGSVEAAYKSHKFSTENTKVAEFIDDIDTAYGWADIVICRSGALTVSEIATAGKMAVFVPFPHAVDDHQTANAQYLVVANGALLMPQGQFNQQSIVALLSPYLAKPSLIKEMAANAKQQAIL
type: DOMAIN
name: Glyco_trans_28_C
description: Glycosyl transferase, family 28, C-terminal
Protein sequence:
MSSDDQHIREIRVHPIENGTVIDHINAGQALNVLKILNIPTSSSRVVSVLINAPSVHGRKDVVKIEGRELNVEEVDKIALIAPNATINIIRDFEVSDKDIVHIHSQIEGVVRCINPNCISNSNEPVTSKFAVSSNGQRTILRCSYCERIISDDIGEHLL

Annotated regions:
phrase: RVHPIENGTVIDHINAGQALNVLKILNIPTSSSRVVSVLINAPSVHGRKDVVKIEGRELNVEEVDKIALIAPNATINIIRDFEVSDKDI
type: DOMAIN
name: Asp_carbamoyltransf_reg_N
description: Aspartate carbamoyltransferase regulatory subunit, N-terminal

phrase: QIEGVVRCINPNCISNSNEPVTSKFAVSSNGQRTILRCSYCERIISD
type: DOMAIN
name: Asp_carbamoyltrfase_reg_C
description: Aspartate carbamoyltransferase regulatory subunit, C-terminal
Protein sequence:
MDGAKAEVFSVSVDTKMGAFKNSLLLLTLLLAIHLEASKIVYKKPLYGNSNIIKDKRIKTKPVKLETSTMSSTGVASSSTTAEEDWPTAVEFVIMTTPASELEASTETIGNNGTTETTVGEAPIIGSSEGSTRSMEPTTASPLMSTNPSSSSSLVSTIPLPPTAGLPVQDNQPVPCTCGVFLSSQIPNGLPTKPLIHQELDHMFPCNAIGRKQCQTKCLETIVQHLPNSANIVCSALGHDCHKERAYLFIKNCHNQWVNTNLQAGREYCCRSGVPYRCPLMG

Annotated regions:
Protein sequence:
MPVSRIAVGAPGELSHPDTAKAAVAEFISMLIFVFAGSGSGMAFSKLTDGGGTTPSGLIAASLAHALALFVAVAVGANISGGHVNPAVTFGAFVGGNISLVKAVVYWVAQLLGSVVACLLLKIATGGAAVGAFSLSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKKGDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTGVWDNHWVYWLGPFVGAAIAALIYDIIFIGQRPHDQLPTADY

Annotated regions:
phrase: HVNPAVTF
type: CONSERVED_SITE
name: MIP_CS
description: Major intrinsic protein, conserved site
Protein sequence:
MDAIKKKMLAMKMEKENAIDRAEQMEQKLRDVEETKNKLEEEFNNLQNKFSNLQNDFDTANEGLTEAQTKLEASEKHVAELESDTAGLNRRIQLLEEDLERSEERLQSATEKLEEASKAADESERGRKVLESRSLADDERLDGLEAQLKEAKYIAEDAERKYDEAARKLAITEVDLERAEARLEAAEAKVWELDEELHIVGNNIKTLSIQNDQASQREDSYQETIRDLTQRLKDAENRATEAERTVSKLQKEVDRLEDELLAEKERYKSISDELDSTFAELAGY

Annotated regions:
Protein sequence:
MEYHEAVNFLFDLRRFQVKPGTESIRRLLSHLGDPHEGVSFVQVAGSNGKGSTARMVDAMLRESGAHVGLYTSPHFDDVRERVRVDGRKIPKSALSAFVAEAKPYLVERAADGEPLTFFETVTALALWYFDRAGVDVAVLEVGMGGELDATSAVDPVASAVTNVSLEHTAVLGDTVAEIAKTKAAVAPADAPLVTGTTGEALSVIREEAGDVLTVGDADADSDADVRVSYGGRVNHQEAAVTVETDAETLDVRIPLLGAYQARNAGIAVSLARQVRPDIDAEAIHRGLRNAHWPGRFEVMGTEPTVVLDGAHNPDACAQVATVLDEFDYDDLHLVYGAMHDKDHGEMVGALPEVASVVTCKADISRGEDPEILSSVFERLNGPAVETGGAVAAALDRARARADPDDCVLVVGSLYVVAEARTTWTRAVVPKTHRTLDDARRTLDRANVADAAERSERARRAVNRTVHTRVQRRQARVLREELLSVGGDCAVSGHEFGGELVDVVLTGTLDQFERLTAALEDPPYALAGVAAEIRETLDIEAADAGEDDERGAGDASDAGHDDYPWNDGTAVMGILNVTPNSFHDGGEFYDIDDAVEQARAMVDAGVDIIDVGGESTRPGADEVPVDEEIRRVAPVIEAIADLDVLVSVDTRKAAVGAAALDAGADILNDVTGLEDPEMRFLAAERGAPVIVMHSIDAPVDPSREVDYDDVVEDVIDELTELVLLAEKAGIPRRNLIVDPGLGFGKSKAENFELLGRTDEFAALGCPILVGHSHKSMFSLVGEEPGDNLAATVAGTAIAADRGADIVRVHDVPENVAAVNVALASRDPNRFEADAERED

Annotated regions:
phrase: TAVMGILNVTPNSFHDGGEFYDIDDAVEQARAMVDAGVDIIDVGGESTRPGADEVPVDEEIRRVAPVIEAIADLDVLVSVDTRKAAVGAAALDAGADILNDVTGLEDPEMRFLAAERGAPVIVMHSIDAPVDPSREVDYDDVVEDVIDELTELVLLAEKAGIPRRNLIVDPGLGFGKSKAENFELLGRTDEFAALGCPILVGHSHKSMFSLVGEEPGDNLAATVAGTAIAADRGADIVRVHDVPENVAAV
type: DOMAIN
name: Pterin-binding_dom
description: Pterin-binding domain

phrase: VAGSNGKGSTARMVDAMLRESGAHVGLYTSPHFDDVRERVRVDGRKIPKSALSAFVAEAKPYLVERAADGEPLTFFETVTALALWYFDRAGVDVAVLEVGMGGELDATSAVDPVASAVTNVSLEHTAVLGDTVAEIAKTKAAVAPADAPLVTGTTGEALSVIREEAGDVLTVGDADADSDADVRVSYGGRVNHQEAAVTVETDAETLDVRIPLLGAYQARNAGIAVS
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GVDIIDVGGESTR
type: DOMAIN
name: Pterin-binding_dom
description: Pterin-binding domain

phrase: VMGILNVTPNSFHDGGEFYDIDDAVEQARAMVDAGVDIIDVGGESTRPGADEVPVDEEIRRVAPVIEAIADLDVLVSVDTRKAAVGAAALDAGADILNDVTGLEDPEMRFLAAERGAPVIVMHSIDAPVDPSREVDYDDVVEDVIDELTELVLLAEKAGIPRRNLIVDPGLGFGKSKAENFELLGRTDEFAALGCPILVGHSHKSMFSLVGEEPGDNLAATVAGTAIAADRGADIVRVHDVPENVAAVNV
type: DOMAIN
name: DHP_synth_dom
description: Dihydropteroate synthase domain

phrase: TAVMGILNVTPNSFHDGGEFYDIDDAVEQARAMVDAGVDIIDVGGESTRPGADEVPVDEEIRRVAPVIEAIADLDVLVSVDTRKAAVGAAALDAGADILNDVTGLEDPEMRFLAAERGAPVIVMHSIDAPVDPSREVDYDDVVEDVIDELTELVLLAEKAGIPRRNLIVDPGLGFGKSKAENFELLGRTDEFAALGCPILVGHSHKSMFSLVGEEPGDNLAATVAGTAIAADRGADIVRVHDVPENVAAVNV
type: DOMAIN
name: DHP_synth_dom
description: Dihydropteroate synthase domain

phrase: VMGILNVTPNSFHDG
type: DOMAIN
name: Pterin-binding_dom
description: Pterin-binding domain

phrase: MGILNVTPNSFHDGGEFYDIDDAVEQARAMVDAGVDIIDVGGESTRPGADEVPVDEEIRRVAPVIEAIADLDVLVSVDTRKAAVGAAALDAGADILNDVTGLEDPEMRFLAAERGAPVIVMHSIDAPVDPSREVDYDDVVEDVIDELTELVLLAEKAGIPRRNLIVDPGLGFGKSKAENFELLGRTDEFAALGCPILVGHSHKSMFSLVGEEPGDNLAATVAGTAIAADRGADIVRV
type: DOMAIN
name: Pterin-binding_dom
description: Pterin-binding domain

phrase: GRFEVMGTEPTVVLDGAHNPDACAQVATVLDEFDYDDLHLVYGAMHDKDHGEMVGALPEVASVVTCKADISRGEDPEILSSVFERLNGPAVETGGAVAAALDRARARADPDDCVLVVG
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MTNMRKSHPLIKMVNHSFIDLPTPSNISAWWNFGSLLGVCLMLQIITGLFLAMHYTADTLTAFSSXTHICRDVNYGWLIRYAHANGASVFFIFLYLHIGRGIYYGSYQFKETWNIGVILLLMVMGTAFMGYVLPWGQMSFWGATVITNLLSAIPYMGPTLVEWIWGGFSVDKATLTRFFAFHFILPFIITAMVMIHLLFLHETGSNNPSGLNSDSDKIPFHPYYSIKDILGLMFMLLLLLTLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALALSILILMLFPIMHVSKQRSMSFRPFSQCLLWTLVANLIILTWIGGQPVEHPFIIIGQLASISYFCIILILMPTSSFMENKMLKW

Annotated regions:
phrase: GLNSDSDKIPFHPYYSIKDILGLMFMLLLLLTLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALALSILILMLFPIMHVSKQRSMSFRPFSQCLLWTLVANLIILTWIGGQPVEHPFIIIGQLASISYFCIILILMPTSSFMENKMLK
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: MTNMRKSHPLIKMVNHSFIDLPTPSNISAWWNFGSLLGVCLMLQIITGLFLAMHYTADTLTAFSSXTHICRDVNYGWLIRYAHANGASVFFIFLYLHIGRGIYYGSYQFKETWNIGVILLLMVMGTAFMGYVLPWGQMSFWGATVITNLLSAIPYMGPTLVEWIWGGFSVDKATLTRFFAFHFILPFIITAMVMIHLLFLHETGSNNP
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: PLIKMVNHSFIDLPTPSNISAWWNFGSLLGVCLMLQIITGLFLAMHYTADTLTAFSSXTHICRDVNYGWLIRYAHANGASVFFIFLYLHIGRGIYYGSYQFKETWNIGVILLLMVMGTAFMGYVLPWGQMSFWGATVITNLLSAIPYMGPTLVEWIWGGFSVDKATLTRFFAFHFILPFIITAMVMIHLLFLHETGS
type: DOMAIN
name: Cytochrome_b_N_euk/bac
description: Cytochrome b/b6, N-terminal domain, eukaryotic/bacterial

phrase: NPSGLNSDSDKIPFHPYYSIKDILGLMFMLLLLLTLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALALSILILMLFPIMHVSKQRSMSFRPFSQCLLWTLVANLIILTWIGGQPVEHPFIIIGQL
type: DOMAIN
name: Cytochrome_b_C_euk/bac
description: Cytochrome b/b6, C-terminal domain, eukaryotic/bacterial

phrase: PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALALSILILMLFPIMHVSKQRSMSFRPFSQCLLWTLVANLIILTWIGGQPVEHPFIIIGQLASISY
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: IDLPTPSNISAWWNFGSLLGVCLMLQIITGLFLAMHYTADTLTAFSSXTHICRDVNYGWLIRYAHANGASVFFIFLYLHIGRGIYYGSYQFKETWNIGVILLLMVMGTAFMGYVLPWGQMSFWGATVITNLLSAIPYMGPTLVEWIWGGFSVDKATLTRFFAFHFILPFIITAMVMIHLLFLHET
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain
Protein sequence:
MEVQVGLNSVHSRPGGRTFRGAFQTLFQSVREAFQSPGAGLLGEEPGTNPQPSSSVQCPPGAHLPEDESPAVPPSSTLSLMGSTFHGCSGDFKDILSEAGTLQLLPPETQTRGSRGDEASATKEDFLGDNAKELCKAVSASMGLGVEALETPSELLPREDCMFAQPSGHSRGAAGTQLGDKQGTSPASFKGRSATGSSHGPGENALAVEVPPTLSLYKSSPGLEEPVALQGRDYYNFQLALAPHARIKLENPLDYGPGSSWAAQCRAPAWHSFFTDEGQLYSRCGRNQGPPGQEGSDFPSDMWYPGGMVSRMPYAAASGCIKSELTPWMEGYAGAFGEIRLEAGRDHVLPIDYYFPPQKTCLICGDEASGCHYGALTCGSCKVFFKRAAEGKQKYLCASRNDCTIDKFRRKNCPSCRLRKCYEAGMTLGARKLKKLGNLKMQEDGEGANSSSPTEEQTPKMVMTCIDGFECQPIFLNVLEAIEPIVVCAGHDNNQPDSFAALLTSLNELGERQLVHVVKWAKALPGFRNLHVDDQMALIQYSWMGLMIFAMGWRSFTNVNSRMLYFAPDLVFNEYRMHKSRMYSQCVRMRHLSQEFGWLQITPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELDRIISCKRKNPTSCSRRFYQLTKLLDTVQPIARELHQFTFDLLIKSHMVSVDFPEMMAEIISVQVPKILSGKVKPIYFHMQ

Annotated regions:
phrase: ECQPIFLNVLEAIEPIVVCAGHDNNQPDSFAALLTSLNELGERQLVHVVKWAKALPGFRNLHVDDQMALIQYSWMGLMIFAMGWRSFTNVNSRMLYFAPDLVFNEYRMHKSRMYSQCVRMRHLSQEFGWLQITPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELDRIISCKRKNPTSCSRRFYQLTKLLDTVQPIARELHQFTFDLLIKSHMVSVDFPEMMAEI
type: DOMAIN
name: Nucl_hrmn_rcpt_lig-bd
description: Nuclear hormone receptor, ligand-binding domain

phrase: QKTCLICGDEASGCHYGALTCGSCKVFFKRAAEGKQKYLCASRNDCTIDKFRRKNCPSCRLRKCYEAGMTL
type: DOMAIN
name: Znf_hrmn_rcpt
description: Zinc finger, nuclear hormone receptor-type

phrase: KTCLICGDEASGCHYGALTCGSCKVFFKRAAEGKQKYLCASRNDCTIDKFRRKNCPSCRLRKCYEAGM
type: DOMAIN
name: Znf_hrmn_rcpt
description: Zinc finger, nuclear hormone receptor-type

phrase: AALLTSLNELGERQLVHVVKWAKALPGFRNLHVDDQMALIQYSWMGLMIFAMGWRSFTNVNSRMLYFAPDLVFNEYRMHKSRMYSQCVRMRHLSQEFGWLQITPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELDRIISCKRKNPTSCSRRFYQLTKLLDTVQPIARELHQF
type: DOMAIN
name: Nucl_hrmn_rcpt_lig-bd
description: Nuclear hormone receptor, ligand-binding domain

phrase: CLICGDEASGCHYGAL
type: DOMAIN
name: Znf_hrmn_rcpt
description: Zinc finger, nuclear hormone receptor-type

phrase: TCGSCKVFFKRAAEG
type: DOMAIN
name: Znf_hrmn_rcpt
description: Zinc finger, nuclear hormone receptor-type

phrase: RKNCPSCR
type: DOMAIN
name: Znf_hrmn_rcpt
description: Zinc finger, nuclear hormone receptor-type

phrase: LRKCYEAG
type: DOMAIN
name: Znf_hrmn_rcpt
description: Zinc finger, nuclear hormone receptor-type

phrase: QKTCLICGDEASGCHYGALTCGSCKVFFKRAAEGKQKYLCASRNDCTIDKFRRKNCPSCRLRKCYEAGMTLGARK
type: DOMAIN
name: Znf_hrmn_rcpt
description: Zinc finger, nuclear hormone receptor-type

phrase: CLICGDEASGCHYGALTCGSCKVFFK
type: DOMAIN
name: Znf_hrmn_rcpt
description: Zinc finger, nuclear hormone receptor-type

phrase: ELGERQLVHVVKWAKALPGFRNLHVDDQMALIQYSWMGLMIFAMGWRSFTNVNSRMLYFAPDLVFNEYRMHKSRMYSQCVRMRHLSQEFGWLQITPQEFLCMKALLLFSIIPVDGLKNQKFFDELRMNYIKELDRIISCKRKNPTSCSRRFYQLTKLLDTVQPI
type: DOMAIN
name: Nucl_hrmn_rcpt_lig-bd
description: Nuclear hormone receptor, ligand-binding domain
Protein sequence:
MGGKWSKSSIVGWPAVRERIKRTPPAAEGVGAVSQDLARHGAVTSSNTAATNADRAWVEAQEEESEVGFPVRPQVPLRPMTYKSALDLSFFLKEKGGLDGLIHSKQRQDILDLWVYNTQGYFPDWQNYTPGPGTRFPLTFGWCFKLVPVDPEEVEKANEGENNCLLHPICQHGMEDEDREVLKWTFDSSLARRHIARELHPEYYKDC

Annotated regions:
Protein sequence:
MNMSKQGIFQTVGSGLDHILSLADIEEEQMIQSVVRTAVTGASYFTSVDQSSVHTAEVGLHQIEPLKTSVDKPSSKKTQGEKFFLIHSADWLTTHALFHEVAKLDVVKLLYNEQFAVQGLLRYHTYARFGIEIQVQINPTPFQQGGLICAMVPSDQSYGSIASLTVYPHGLLNCNINNVVRIKVPFIYTRGAYHFKDPQYPVWELTIRVWSELNIGTGTSAYTSLNVLARFTDLELHGLTPLSTQMMRNEFRVSTTENVVNLSNYEDARAKMSFALDQEDWKSDPSQGGGIKITHFTTWTSIPTLAAQFPFNASDSVGQQIKVIPVDPYFFQMTNTNPDQKCITALASICQMFCFWRGDLVFDFQVFPTKYHSGRLLFCFVPGNELIDVTGITLKQATTAPCAVMDITGVQSTLRFRVPWISDTPYRVNRYTKSAHQKGEYTAIGKLIVYCYNRLTSPSNVASHVRVNVYLSAINLECFAPLYHAMDVTTQVGDDSGGFSTTVSTEQNVPDPQVGITTMKDLKGKANRGKMDVSGVQAPVGAITTIEDPALAKKVPETFPELKPGESRHTSDHMSIYKFMGRSHFLCTFTFNSNNKEYTFPITLSSTSNPPHGLPSTLRWFFNLFQLYRGPLDLTIIITGATDVDGMAWFTPVGLAVDTPWVEKESALSIDYKTALGAVRFNTRRTGNIQIRLPWYSYLYAVSGALDGLGDKTDSTFGLVSIQIANYNHSDEYLSFSCYLSVTQQSEFYFPRAPLNSNAMLSTESMMSRIAAGDLESSVDDPRSEEDRRFESHIECRKPYKELRLEVGKQRLKYAQEELSNEVLPPPRKMKGLFSQAKISLFYTEEHEIMKF

Annotated regions:
phrase: TSIPTLAAQFPFNASDSVGQQIKVIPVDPYFFQMTNTNPDQKCITALASICQMFCFWRGDLVFDFQVFPTKYHSGRLLFCFVPGNELIDVTGITLKQATTAPCAVMDITGVQSTLRFRVPWISDTPYRVNRYTKSAHQKGEYTAIGKLIVYCYNRLTSPSNVASHVRVNVYLSAINLECFA
type: DOMAIN
name: Rhv-like
description: Picornavirus/Calicivirus coat protein

phrase: FFLIHSADWLTTHALFHEVAKLDVVKLLYNEQFAVQGLLRYHTYARFGIEIQVQINPTPFQQGGLICAMVPSDQSYGSIASLTVYPHGLLNCNINNVVRIKVPFIYTRGAYHFKDPQYPVWELTIRVWSELNIGTGTSAYTSLNVLARFTDLELHGLTPL
type: DOMAIN
name: Rhv-like
description: Picornavirus/Calicivirus coat protein

phrase: EPLKTSVDKPSSKKTQGEKFFLIHSADWLTTHALFHEVAKLDVVKLLYNEQFAVQGLLRYHTYARFGIEIQVQINPTPFQQGGLICAMVPSDQSYGSIASLTVYPHGLLNCNINNVVRIKVPFIYTRGAYHFKDPQYPVWELTIRVWSEL
type: DOMAIN
name: Picornavirus_capsid
description: Picornavirus capsid

phrase: TNTNPDQKCITALASICQMFCFWRGDLVFDFQVFPTKYHSGRLLFCFVPGNELIDVTGITLKQATTAPCAVMDITGVQSTLRFRVPWISDTPYRVNRYTK
type: DOMAIN
name: Picornavirus_capsid
description: Picornavirus capsid
Protein sequence:
MLTISTGGGGGGGNVNGYSGGGGGGYGGGGGYGGGGAGGDRMNNLGANLQKQNWDLSTMPKFEKSFYKEDPVVAARSEEDVAKFRAQHNIAVQGPNIPKPVETFDEAGFPAYVMTEVKAQGFPAPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQQEITKFGKSSRIRNTCVYGGVPKGGQIRDLAKGVEVCIATPGRLIDMIESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKILGQIRPDRQTCMWSATWPKEVRALASDYLNEFIQVNIGSLELSANHRITQIVEVVSEFEKRDKMTKHLEKIMEDKDNKILIFTGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVLNEFKTGKSPIMVATDVASRGIDVRNITHVFNYDYPNNSEDYIHRIGRTGRAGQKGTAITLFTTDNQKQARDLVNVLTEAKQVIDPRLAEMTRYGGGGGGRGYGGRGYGGGRGRGGGGGGRRW

Annotated regions:
phrase: ETFDEAGFPAYVMTEVKAQGFPAPTPIQ
type: DOMAIN
name: RNA_helicase_DEAD_Q_motif
description: RNA helicase, DEAD-box type, Q motif

phrase: WPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQQEITKFGKSSRIRNTCVYGGVPKGGQIRDLAKGVEVCIATPGRLIDMIESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKILGQIRPDRQTCMWSATWPKEVRALASDYLNEFIQ
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: GFPAPTPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQQEITKFGKSSRIRNTCVYGGVPKGGQIRDLAKGVEVCIATPGRLIDMIESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKILGQIRPDRQTCMWSATWPKEVRALASDYLNEFIQVNIGSLELSANHRITQ
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: KMTKHLEKIMEDKDNKILIFTGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVLNEFKTGKSPIMVATDVASRGIDVRNITHVFNYDYPNNSEDYIHRIGRTGRAGQKGTAITLFTTDNQKQARDLVNVLTEAKQVIDPRLAEM
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: TPIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQQEITKFGKSSRIRNTCVYGGVPKGGQIRDLAKGVEVCIATPGRLIDMIESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKILGQIRPDRQTCMWSATWPKEVR
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: KHLEKIMEDKDNKILIFTGTKRVADDITRFLRQDGWPALSIHGDKQQNERDWVLNEFKTGKSPIMVATDVASRGIDVRNITHVFNYDYPNNSEDYIHRIGRTGRA
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: DDITRFLRQDGWPALSIHGDKQQNERDWVLNEFKTGKSPIMVATDVASRGIDVRNITHVFNYDYPNNSEDYIHRIGRTGRA
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: VLDEADRM
type: CONSERVED_SITE
name: RNA-helicase_DEAD-box_CS
description: ATP-dependent RNA helicase DEAD-box, conserved site
Protein sequence:
MRVVIQRVSKASVTIEENVVGKVGPGFMLLVAFNDEDTDADLDFAVRKIVNMRIFEDEQAKMNLSINDVKGAILSVSQFTLFASTKKGNRPSFTKSGNPELASKLYDQFNAKLRATGIEVQTGQFGADMQVELVNDGPVTIVLDTQNKE

Annotated regions:
Protein sequence:
MGGLWRPGWRRVAFCGWRWIHPGSPTRAAERVEPFLRPECSGTGGAGRGLRWLGTWKRCSLGARHPALQPPRRHKNSNPFTRAQKEEWRRRNKTTLTYVAAVAVGMLGASYAAVPLYRLYCQTTGLGGSAVAGHASDKIENMVPVKDRIIKISFNADVHASLQWNFRPQQTEIYVVPGETALAFYRAKNPTDKPVIGISTYNIVPFEAGQYFNKIQQCFCFEEQRLNPQEEVDMPVFFYIDPEFAEDPRMIKVDLITLSYTFFEAKEGHKLPVPGYN

Annotated regions:
Protein sequence:
MTYLMNNYARLPVKFVRGKGVYLYDEEGKEYLDFVSGIGVNSLGHAYPKLTEALKEQVEKLLHVSNLYENPWQEELAHKLVKHFWTEGKVFFANSGTESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKLNDIDSVYKLLDEETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQHFNLKPDVIALAKGLGGGVPIGAILAREEVAQSFTPGSHGSTFGGNPLACRAGTVVVDEVEKLLPHVREVGNYFKEKLKELGKGKVKGRGLMLGLELERECKDYVLKALEKGLLINCTAGKVLRFLPPLIIQKEHIDRAISVLREIL

Annotated regions:
phrase: LIIDEVQTGIGRTGEFYAYQHFNLKPDVIALAKGLGG
type: CONSERVED_SITE
name: Aminotrans_3_PPA_site
description: Aminotransferases class-III pyridoxal-phosphate attachment site
Protein sequence:
MFQGQRGWFCGSVSHDLRQFWVAEGGTISDPRAADFLFSCDASHPDTLRIYQSLDYIEDNATVFHAYYLSAVANAEIKNSVALGHFILPPASLQKEIRRKIGSFIWEQDQHFLIEKHDEVTSNELKVFRESSVLATDHKKDLSKSTEKHFIRTPVVEKQMYFPLQHYPVNNMVTGYISIDAMKKFLGELHDFIPGSSGYLAYHVQNEINMSAIKNKLKNKY

Annotated regions:
Protein sequence:
MEAPPVTMMPVTGGTINMMEYLLQGSVLDHSLESLIHRLRGLCDNMEPETFLDHEMVFLLKGQQASPFVLRARRSMDRAGAPWHLRYLGQPEMGDKNRHALVRNCVDIATSENLTDFLMEMGFRMDHEFVAKGHLFRKGIMKIMVYKIFRILVPGNTDSTEALSLSYLVELSVVAPAGQDMVSDDMKNFAEQLKPLVHLEKIDPKRLM

Annotated regions: