nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MREVIIYTDGACSGNPGPGGWGAVLLYGSHRKELSGFHPHTTNNRMEIQAAIEALRALKYPCKVKLYSDSAYLVNAFRQNWLRTWQRNGWVNSRKQPVENQDLWQELLEAARPHQVEWLKVQGHADVAENNRCDELARAAIAAGTQG

Annotated regions:
phrase: REVIIYTDGACSGNPGPGGWGAVLLYGSHRKELSGFHPHTTNNRMEIQAAIEALRALKYPCKVKLYSDSAYLVNAFRQNWLRTWQRNGWVNSRKQPVENQDLWQELLEAARPHQVEWLKVQGHADVAENNRCDELARAA
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: MREVIIYTDGACSGNPGPGGWGAVLLYGSHRKELSGFHPHTTNNRMEIQAAIEALRALKYPCKVKLYSDSAYLVNAFRQNWLRTWQRNGWVNSRKQPVENQDLWQELLEAARPHQVEWLKVQGHADVAENNRCDELARAAI
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain
Protein sequence:
MANAKELKEVLSGPIVSNNPIALQVLGVCSALAVTSKLETALVMTIALTAVCAFSNLFISMLRNHIPSSVRIIVQMTVIASLVIVVDQVLQAYAYDVAKQLSVFVGLIITNCIVMGRAEAYAMKTPPMMSFMDGIGNGIGYGAILLSVGFVRELFGNGSLFGVEILSKISDGGWYQPNGLLLLPPSAFFLIGTLIWIIRTIKPEQVEAKG

Annotated regions:
Protein sequence:
MALTSFLPAPTQLSQDQLEAEEKARSQRSRQTSLVSSRREPPPYGYRKGWIPRLLEDFGDGGAFPEIHVAQYPLDMGRKKKMSNALAIQVDAEGKIKYDAIARQGQSKDKVIYSKYTDLVPKEVMNADDPDLQRPDEEAIKEITEKTRVALEKSVSQKVAAAMPVRAADKLAPAQYIRYTPSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVKEQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKAREAVEMRAQVERKMAQKEKEKHEEKLREMAQKARERRAGIKTHVEKEDGEARERDEIRHDRRKERQHDRNLSRAAPDKRSKLQRNENRDISEVIALGVPNPRTSNEVQYDQRLFNQSKGMDSGFAGGEDEIYNVYDQAWRGGKDMAQNIYRPSKNLDKDMYGDDLEARIKTNRFVPDKEFSGSDRRQRGREGPVQFEEDPFGLDKFLEEAKQHGGSKRPSDSSRPKEHEHEGKKRRKE

Annotated regions:
phrase: QYIRYTPSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVKEQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKAREAVEMRAQVERKMAQKEKEKHEEKLREMAQKARER
type: DOMAIN
name: SKI-int_prot_SKIP_SNW-dom
description: SKI-interacting protein SKIP, SNW domain
Protein sequence:
MSTATLVVFPPPPPVPIPTYITSLGLGYSIAIALGFLVLISTIILSSYICCRASRLRFSASAANANANASFSDRGVIVPRIIFVAEDDDLESGNVVVGGLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICLCEYMEEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCRNSPLPTPQSTPQSTPLSEVVPLSQYAADRRRSRR

Annotated regions:
phrase: TCSICLCEYMEEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVC
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: CSICLCEYMEEEMLRMMPECKHYFHVYCLDAWLKLNGSCPV
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: CSICLCEYMEEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVC
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type
Protein sequence:
MQAANDHFFTGLSKKGPVRKENQDFYGFSFNQNNLLIVVCDGLGGYKGGKIASNLVGKLFLSLFEGFEFNQWDETTVKKWFENTLIQARFQLENCFQTVYEAQIQFARMASTLVLGILTKSDIYIFWIGDSRAYLLFENQAKLVTKDHNLYNQLVAMNADEKLLLSYSNQLLALTNTISKETKRPLVYGFYNTKIEQQEFLLLCSDGLYNFVEKELFFEIITNSKNLKQAVFNLYRKSIENASNDNITAALVNLQKWKQS

Annotated regions:
phrase: FFTGLSKKGPVRKENQDFYGFSFNQNNLLIVVCDGLGGYKGGKIASNLVGKLFLSLFEGFEFNQWDETTVKKWFENTLIQARFQLENCFQTVYEAQIQFARMASTLVLGILTKSDIYIFWIGDSRAYLLFENQAKLVTKDHNLYNQLVAMNADEKLLLSYSNQLLALTNTISKETKRPLVYGFYNTKIEQQEFLLLCSDGLYNFVEKELFFEIITNSKNLKQAVFNLYRKSIENASNDNITAALVN
type: DOMAIN
name: PPM-type_phosphatase-like_dom
description: PPM-type phosphatase-like domain

phrase: FTGLSKKGPVRKENQDFYGFSFNQNNLLIVVCDGLGGYKGGKIASNLVGKLFLSLFEGFEFNQWDETTVKKWFENTLIQARFQLENCFQTVYEAQIQFARMASTLVLGILTKSDIYIFWIGDSRAYLLFENQAKLVTKDHNLYNQLVAMNADEKLLLSYSNQLLALTNTISKETKRPLVYGFYNTKIEQQEFLLLCSDGLYNFVEKELFFEIITNSKNLKQAVFNLYRKSIENASNDNITAALVN
type: DOMAIN
name: PPM-type_phosphatase-like_dom
description: PPM-type phosphatase-like domain

phrase: FTGLSKKGPVRKENQDFYGFSFNQNNLLIVVCDGLGGYKGGKIASNLVGKLFLSLFEGFEFNQWDETTVKKWFENTLIQARFQLENCFQTVYEAQIQFARMASTLVLGILTKSDIYIFWIGDSRAYLLFENQAKLVTKDHNLYNQLVAMNADEKLLLSYSNQLLALTNTISKETKRPLVYGFYNTKIEQQEFLLLCSDGLYNFVEKELFFEIITNSKNLKQAVFNLYRKSIENASNDNITAALVN
type: DOMAIN
name: PPM-type_phosphatase-like_dom
description: PPM-type phosphatase-like domain

phrase: MQAANDHFFTGLSKKGPVRKENQDFYGFSFNQNNLLIVVCDGLGGYKGGKIASNLVGKLFLSLFEGFEFNQWDETTVKKWFENTLIQARFQLENCFQTVYEAQIQFARMASTLVLGILTKSDIYIFWIGDSRAYLLFENQAKLVTKDHNLYNQLVAMNADEKLLLSYSNQLLALTNTISKETKRPLVYGFYNTKIEQQEFLLLCSDGLYNFVEKELFFEIITNSKNLKQAVFNLYRKSIENASNDNITAAL
type: DOMAIN
name: PPM-type_phosphatase-like_dom
description: PPM-type phosphatase-like domain
Protein sequence:
MRPWTGSWRWIMLILFAWGTLLFYIGGHLVRDNENPDHSSRELSKILAKLERLKQQNEDLRRMAESLRIPEGPIEQGAAAGRIRALEEQLLKAKEQIEMYKQQSSNAVSGLGKDHEILRRAIENGAKEFWYFVQSEVKKLKHLDRNELQRHVDEIIIDMGHQQRSVMTDLYYLSQTDGAGDWREREAKDLTDLVQRRITYLQNPKDCSKAKKLVCNINKGCGYGCQLHHVVYCFMIAYGTQRTLILESQSWRYATGGWETVFKPVSETCTDRSGSSTGHWSGEANDKNVQVVELPIVDSLHPRPPYLPLGVPEDLADRLIRLHGDPAVWWVSQFVKYLIRPQPWLEKEIEESTKKLGFKHPVIGVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMQIDKKRVYLATDDPTLLQEAKAKYPQYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIMQTLHPDASAHFHSLDDIYYFGGQNAHNQLAIYPHQPRNAEEIPLEPGDIIGVAGNHWDGYSKGINRKLGRTGLYPSYKVKEKIETVKYPTYQEAEK

Annotated regions:
phrase: NQLAIYPHQPRNAEEIPLEPGDIIGVAGNHWDGYSKGINRKLGRTGLYPSYKVK
type: DOMAIN
name: Fut8_SH3
description: Alpha-(1,6)-fucosyltransferase, SH3 domain

phrase: HNQLAIYPHQPRNAEEIPLEPGDIIGVAGNHWDGYSKGINRKLGRTGLYPSYKVKEK
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: AIYPHQPRNAEEIPLEPGDIIGVAGNHWDGYSKGINRKLGRTGLYPSYKV
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: KAKKLVCNINKGCGYGCQLHHVVYCFMIAYGTQRTLILESQSWRYATGGWETVFKPVSETCTDRSGSSTGHWSGEANDKNVQVVELPIVDSLHPRPPYLPLGVPEDLADRLIRLHGDPAVWWVSQFVKYLIRPQPWLEKEIEESTKKLGFKHPVIGVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMQIDKKRVYLATDDPTLLQEAKAKYPQYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIMQTLHPDASAHFHS
type: DOMAIN
name: GT23_dom
description: Glycosyltransferase family 23 (GT23) domain

phrase: QNAHNQLAIYPHQPRNAEEIPLEPGDIIGVAGNHWDGYSKGINRKLGRTGLYPSYKVKEKI
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: RPWTGSWRWIMLILFAWGTLLFYIGGHLVRDNENPDHSSRELSKILAKLERLKQQNEDLRRMAESLRIPEGPIEQGAAAGRIRALEEQLLKAKEQIEMYKQQSSNAVSGLGKDHEILRRAIENGAKEFWYFVQSEVKKLKHLDRNELQRHVDEIIIDMGHQQRSVMTDLYYLSQTDGAGDWREREAKDLTDLVQRRITYLQNPKDCSKAKKLVCNINKGCGYGCQLHHVVYCFMIAYGTQRTLILESQSWRYATGGWETVFKPVSETCTDRSGSSTGHWSGEANDKNVQVVELPIVDSLHPRPPYLPLGVPEDLADRLIRLHGDPAVWWVSQFVKYLIRPQPWLEKEIEESTKKLGFKHPVIGVHVRRTDKVGTEAAFHPIEEYMVHVEEHFQLLARRMQIDKKRVYLATDDPTLLQEAKAKYPQYEFISDNSISWSAGLHNRYTENSLRGVILDIHFLSQADFLVCTFSSQVCRVAYEIMQTLHPDASAHFHSLDDIY
type: DOMAIN
name: Fut8_N_cat
description: Alpha-(1,6)-fucosyltransferase, N- and catalytic domain
Protein sequence:
MLDNTRLRIAIQKSGRLSDDSRELLARCGIKINLHTQRLIAMAENMPIDILRVRDDDIPGLVMDGVVDLGIIGENVLEEELLNRRAQGEDPRYLTLRRLDFGGCRLSLATPVDEAWDGPAALDGKRIATSYPHLLKRYLDQKGVSFKSCLLNGSVEVAPRAGLADAICDLVSTGATLEANGLREVEVIYRSKACLIQRDGEMAQSKQQLIDKLLTRIQGVIQARESKYIMMHAPSERLEEVIALLPGAERPTILPLAGEQQRVAMHMVSSETLFWETMEKLKALGASSILVLPIEKMME

Annotated regions:
phrase: ARESKYIMMHAPSERLEEVIALLPGAERPTILPLAGEQQRVAMHMVSSETLFWETMEKLKALGASSILVLPIE
type: DOMAIN
name: HisG_C
description: Histidine biosynthesis HisG, C-terminal

phrase: EMAQSKQQLIDKLLTRIQGVIQARESKYIMMHAPSERLEEVIALLPGAERPTILPLAGEQQRVAMHMVSSETLFWETMEKLKALGASSILVLPIEKM
type: DOMAIN
name: HisG_C
description: Histidine biosynthesis HisG, C-terminal

phrase: LRIAIQKSGRLSDDSRELLARCGIKINLHTQRLIAMAENMPIDILRVRDDDIPGLVMDGVVDLGIIGENVLEEELLNRRAQGEDPRYLTLRRLDFGGCRLSLATPVDEAWDGPAALDGKRIATSYPHLLKRYLDQKGVSFKSCLLNGSVEVAPRAGLADAICDLVSTGATLEANGLREVEVIYRSKACLI
type: DOMAIN
name: ATP_PRibTrfase_cat
description: ATP phosphoribosyltransferase, catalytic domain

phrase: EVAPRAGLADAICDLVSTGAT
type: CONSERVED_SITE
name: ATP_PRibTrfase_CS
description: ATP phosphoribosyltransferase, conserved site

phrase: RDDDIPGLVMDGVVDLGIIGENVLEEELLNRRAQGEDPRYLTLRRLDFGGCRLSLATPVDEAWDGPAALDGKRIATSYPHLLKRYLDQKGVSFKSCLLNGSVEVAPRAGLADAICDLVSTGATLEANGLREVEVIYRSKACLIQRDGEMAQSKQQLIDKLLTRIQ
type: DOMAIN
name: ATP_PRibTrfase_cat
description: ATP phosphoribosyltransferase, catalytic domain
Protein sequence:
MESERAAYAFLPQTPIKSTDAHLVEFSEAMRAVAKTLRQVAEGKAAAQAEAAEWKRKYELEKAVKAHRHNTVTKGCSNCDKEKLEQLASQLTLETTSVDPTSCCGNHEICSRQILQDECPGTNKISHDKIAARKAPFKLSWGCNGDNNGQHKHDFVSFEKGDITTAERSNKQILLKWESPPQTVLFVTKPNSNSVHALCAEMVRWLKEHNNINIFVEPRVSKELVTEDSYFNFIQTWDNDEEMKTLHTKVDLIVTLGGDGTVLWAASLFKGPVPPVVAFSLGSLGFMTPFSSELYRECLDHVLKRPFGITLRSRLQCHVIYDSAKNEVDTEEPILVLNEVTIDRGMSSYLTYLECYCDSSFVTRVQGDGLIISTTSGSTAYSLAAGGSMVHPQVPGILFTPICPHSLSFRPLILPEYVTLRVQVPINSRGQAWASFDGKGRKQLGPGDALICSISPWPVPTACLVDSTTDFLRSIHEGLHWNLRKSQSFDGPVA

Annotated regions:
Protein sequence:
METKPKTATTIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAVAPLVVGLTVESGFEANVAVVVGSRTTGLGGTAVSLKLTPSHYSSSVYVFHGGRHLDPSTQAPNLTRLCERARRHFGFSDYTPRPGDLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVSINNTFLHLGGSDKVTIGGAEVHRIPVYPLQLFMPDFSRVIAEPFNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGPAAVALRCRNVDAVARAAAHLAFDENHEGAALPADITFTAFEASQGKTPRGERDGGGKGAAGGFEQRLASVMAGDAALALESIVSMAVFDEPPTDISAWPLFEGQDTAAARANAVGAYLARAAGLVGAMVFSTNSALHLTEVDDAGPADPKDHSKPSFYRFFLVPGTHVAANPQVDREGHVVPGFEGRPTAPLVGGTQEFAGEHLAMLCGFSPALLAKMLFYLERCDGAVIVGRQEMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRARHPKFASAARGAIGVFGTMNSMYSDCDVLGNYAAFSALKRADGSETARTIMQETYRAATERVMAELETLQYVDQAVPTAMGRLETIITNREALHTVVNNVRQVVDREVEQLMRNLVEGRNFKFRDGLGEANHAMSLTLDPYACGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRNFRNQFQPVLRRRVMDMFNNGFLSAKTLTVALSEGAAICAPSLTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLFAGASANASEAAKARVASLQSAYQKPDKRVDILLGPLGFLLKQFHAAIFPNGKPPGSNQPNPQWFWTALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLAPNNVSELAMYYMANQILRYCDHSTYFINTLTAIIAGSRRPPSVQAAAAWSAQGGAGLEAGARALVDAVDAHPGAWTSMFASCNLLRPVMAARPMVVLGLSISKYYGMAGNDRVFQAGNWASLMGGKNACPLLIFDRTRKFVLACPRAGFVCAASSLGGGAHESSLCEQLRGIISEGGAAVASSVFVATVKSLGPRTQQLQIEDWLALLEDEYLSEEMMELTARALERGNGEWSTDAALEVAHEAEALVSQLGNAGEVFNFGDFGCEDDNATPFGGPGAPGPAFAGRKRAFHGDDPFGEGPPDKKGDLTLDML

Annotated regions:
Protein sequence:
MVRHADTPTDAQRAREQFLSTGALQPDAVASSVLNSWQRSRELHVHPDRVELPYVRDPDTDTPLMHAAAPVLRRMAEDLSDQSVSVVLTSADGLVLDRVAADTEFERVLDDVRLARGYSYAEEFAGTNGIGTALETGRPAFIRGSEHYVGTLGGLACAGSPIREPVTRRILGVIDLTCRARQADPLLFVLAKSAGSQIEDRLRTMNNETETALLDAYLKQSRRYPGGVLAIGGDVVLMNRYLRQALDAADQTVLLDHAAELTRSSFTSTTVAHLPSGASVKISAAERIIVGVRSDSVVFHVSVHVAESIPVRSSQHIPRLAGQSSSFRRSAQQVERCYRDREWVVIEGERGSGRTYLGYSVVHFVTPERSIPVLHIDNFDTPESFVAAFESETDSADFAVIVSDVDELPDEVLNPMAAIMQTRAGRGWIAATTSTERDSQLVDLLMLPFFTHTVTVPALRHRIEDLQELVPMILNELSRGEARMDGEAMRQLAKLPWPGNIAQLRHVLTETVRRQRSGVIGVDKLPAECRSVTRRKLTPLEAMERDAIVRSLLENDGNKADAAAALGMSRATIYRKIKDFGIA

Annotated regions:
phrase: LEAMERDAIVRSLLENDGNKADAAAALGMSRATIYRKIKD
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: LAGQSSSFRRSAQQVERCYRDREWVVIEGERGSGRTYLGYSVVHFVTPERSIPVLHIDNFDTPESFVAAFESETDSADFAVIVSDVDELPDEVLNPMAAIMQTRAGRGWIAATTSTERDSQLVDLLMLPFFTHTVTVPALRHRIEDLQELVPMILNELSRGEARMDGEAMRQLAKLPWPGNIAQLRHVLTETV
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: DAIVRSLLENDGNKADA
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: AAALGMSRATIYRKIKDFGI
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type
Protein sequence:
MKLPIYLDYAATCPVDERVVKKMMEFLSIDGNFGNPASRSHKFGWQAEEAVDVARNHIADLIGADSREIVFTSGATEADNLALKGVMRFYQTKGKHLITCKTEHKAILDTCRQLEREGFEVTYLDPKSDGLIDLEELKSVIRDDTVLVSIMHANNEIGVVQDIAKIGEICRERKVLFHTDATQSVGKLPINLSELKVDLLSMSSHKLYGPKGIGALYVCRKPRVRLEAIIHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMPRLTALRDRLYNGLKDIEETYVNGSMEQRLGNNLNISFNYVEGESLMMALRDIAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFTVGRYTTAEEIDYAIGLVKSAVEKLRDLSPLWDMFKEGIDLNSIEWTHH

Annotated regions:
phrase: IYLDYAATCPVDERVVKKMMEFLSIDGNFGNPASRSHKFGWQAEEAVDVARNHIADLIGADSREIVFTSGATEADNLALKGVMRFYQTKGKHLITCKTEHKAILDTCRQLEREGFEVTYLDPKSDGLIDLEELKSVIRDDTVLVSIMHANNEIGVVQDIAKIGEICRERKVLFHTDATQSVGKLPINLSELKVDLLSMSSHKLYGPKGIGALYVCRKPRVRLEAIIHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMPRLTALRDRLYNGLKDIEETYVNGSMEQRLGNNLNISFNYVEGESLMMALRDIAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFTVGRYTTAEEID
type: DOMAIN
name: Aminotrans_V_dom
description: Aminotransferase class V domain

phrase: VDLLSMSSHKLYGPKGIGA
type: BINDING_SITE
name: Aminotrans_V_PyrdxlP_BS
description: Aminotransferase class-V, pyridoxal-phosphate binding site
Protein sequence:
MTVSLARLERQLGYTFKDQELMVLALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFPQAREGQLSRLRARLVKGETLAVLARGFGLGEYLRLGSGELKSGGFRRESILADALEALIGAIYLDAGMEAAKERVTAWLTSEIESLTLVDTNKDPKTRLQEFLQSRGCELPRYEVVDIQGEPHCRVFFVECEITLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGHD

Annotated regions:
phrase: DQELMVLALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFPQAREGQLSRLRARLVKGETLAVLARGFGLGEYLRLGSGELKSGGFRRESILADALEALIGAIYLDAGMEAAKERVTAWLT
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: ELMVLALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFPQAREGQLSRLRARLVKGETLAVLARGFGLGEYLRLGSGELKSGGFRRESILADALEALIGAIYLDAGMEAAKERVTAWLTSEIESLT
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: PKTRLQEFLQSRGCELPRYEVVDIQGEPHCRVFFVECEITLLNEKSRGQGVSRRIAEQVAAAAALIAL
type: DOMAIN
name: dsRBD_dom
description: Double-stranded RNA-binding domain

phrase: PKTRLQEFLQSRGCELPRYEVVDIQGEPHCRVFFVECEITLLNEKSRGQGVSRRIAEQVAAAAAL
type: DOMAIN
name: dsRBD_dom
description: Double-stranded RNA-binding domain

phrase: LARLERQLGYTFKDQELMVLALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFPQAREGQLSRLRARLVKGETLAVLARGFGLGEYLRLGSGELKSGGFRRESILADALEALIGAIYLDA
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: DPKTRLQEFLQSRGCELPRYEVVDIQGEPHCRVFFVECEITLLNEKSRGQGVSRRIAEQVAAAAALIALG
type: DOMAIN
name: dsRBD_dom
description: Double-stranded RNA-binding domain

phrase: ELMVLALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFPQAREGQLSRLRARLVKGETLAVLARGFGLGEYLRLGSGELKSGGFRRESILADALEALIGAIYLDAGMEAAKERVTAWLTSEIESLT
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: ERLEFLGD
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain
Protein sequence:
MVKEISVGNVKIGGDRPLVLIAGPCVIENEVATMRCAERLMTICNGVSIPLIFKASYDKANRTSVNSFRGPGMKDGLKILKKVKEALGVPVLSDIHSIEQVEPAAEVLDVVQIPAFLCRQTDLVVAAARSGKVVNIKKGQFLAPWDMENVAGKAVSTGNDNIILTERGVSFGYNNLVSDMRSFPILRKIGYPVVFDATHSVQLPGGLGGSSGGQREFVEYLGRAAVATGIDGIFMEVHDDPEKALCDGPNSVKLEDLPALLKKLKAIDAIVK

Annotated regions:
phrase: NVKIGGDRPLVLIAGPCVIENEVATMRCAERLMTICNGVSIPLIFKASYDKANRTSVNSFRGPGMKDGLKILKKVKEALGVPVLSDIHSIEQVEPAAEVLDVVQIPAFLCRQTDLVVAAARSGKVVNIKKGQFLAPWDMENVAGKAVSTGNDNIILTERGVSFGYNNLVSDMRSFPILRKIGYPVVFDATHSVQLPGGLGGSSGGQREFVEYLGRAAVATGIDGIFMEVHDDPEKALCDGPNSVKLEDLPALLKKLKAID
type: DOMAIN
name: DAHP1/KDSA
description: DAHP synthetase I/KDSA
Protein sequence:
MSGTHKKLGARHKARKRAVDFLFEAEARDLDPVALASERSDLSVKDDAVAPVAAYTVTLVSGVAENLDRIDQVISSHLQDWTLERLPAVDRAILRIAVWELFHATDVPPVVAVDEAVELAKQLSTDDSPGFVNGILGQVVLVAPQVRSAAAATSQRAQESDSGTE

Annotated regions:
phrase: HKARKRAVDFLFEAEARDLDPVALASERSDLSVKDDAVAPVAAYTVTLVSGVAENLDRIDQVISSHLQDWTLERLPAVDRAILRIAVWELFHATDVPPVVAVDEAVELAKQLSTDDSPGFVNGILGQ
type: DOMAIN
name: NusB_RsmB_TIM44
description: NusB/RsmB/TIM44
Protein sequence:
MKFQIRPASEVAIKSKPVRQQQMRQLRQNIRKILIRLDPDISVEGAWDRVTVDVPDGRGLTGQVVDELVRIPGISTIQEVAVYPLVSMDDVAEKAVAAFAASLAGKTFVVRAKRLGDHSFTSIELERFVGGALLQASEAKGVSLKTPDITVRIEVRQGDFLVALRRHRGAGGYPMGSIESVMTLISGGYDSSVAAYLMMRRGLRTHFLFFNLGGTAHEVGVKQVVHYIWQRYGSSHHAKFISVPFDAVVAEIMTSVNHRHWGVVLKREMLRAASAIADENNTMGLVMGDAVAQVSSQTLANLNVVDRACDQVVLRPLISMDKENIIKIARDIGTEPFARTMPEYCGVISQKPATRAKLDRVLHDEEQMNPAVLQQAIDSRTETPVASLMDTMTTPEEVELVPTPGVGDVIIDVRHPSESEQSPLTLTNNEVLHIPFYELNQKIAELPADRQYLLYCDRGSMSRMHAGHLKAEGYGNVKVYTPGR

Annotated regions:
phrase: ASLMDTMTTPEEVELVPTPGVGDVIIDVRHPSESEQSPLTLTNNEVLHIPFYELNQKIAELPADRQYLLYCDRGSMSRMHAGHLKAEGYGNVKVYT
type: DOMAIN
name: THII_Thiazole_biosynth_dom
description: ThiI, thiazole biosynthesis domain

phrase: NIRKILIRLDPDISVEGAWDRVTVDVPDGRGLTGQVVDELVRIPGISTIQEVAVYPLVSMDDVAEKAVAAFAASLAGKTFVVRAKRLGDHSFTSIELERFVGGALLQASEAKGVSLKTPDITVRIEVRQGDFLVALRRHRGA
type: DOMAIN
name: THUMP_ThiI
description: ThiI, THUMP domain

phrase: SEVAIKSKPVRQQQMRQLRQNIRKILIRLDPDISVEGAWDRVTVDVPDGRGLTGQVVDELVRIPGIS
type: DOMAIN
name: ThiI_fer
description: ThiI, ferredoxin-like domain

phrase: MGSIESVMTLISGGYDSSVAAYLMMRRGLRTHFLFFNLGGTAHEVGVKQVVHYIWQRYGSSHHAKFISVPFDAVVAEIMTSVNHRHWGVVLKREMLRAASAIADENNTMGLVMGDAVAQVSSQTLANLNVVDRACDQVVLRPLISMDKENIIKIARDIGTEPFARTMPEYCGVISQKPATR
type: DOMAIN
name: ThiI_AANH
description: Thil, AANH domain

phrase: EVAIKSKPVRQQQMRQLRQNIRKILIRLDPDISVEGAWDRVTVDVPDGRGLTGQVVDELVRIPGISTIQEVAVYPLVSMDDVAEKAVAAFAASLAGKTFVVRAKRLGDHSFTSIELERFVGGALLQASEAKGVSLKTPDITVRIEVRQGDFLVALRRHRGAGGYPMGSIESVMTLISGGYDSSVAAYLMMRRGLRTHFLFFNLGGTAHEVGVKQVVHYIWQRYGSSHHAKFISVPFDAVVAEIMTSVNHRHWGVVLKREMLRAASAIADENNTMGLVMGDAVAQVSSQTLANLNVVDRACDQVVLRPLISMDKENIIKIARDIGTEPFARTMPEYCGVISQKPATRAKLDRVLHDEEQM
type: DOMAIN
name: ThiI_N
description: ThiI, N-terminal

phrase: STIQEVAVYPLVSMDDVAEKAVAAFAASLAGKTFVVRAKRLGDHSFTSIELERFVGGALLQASEAKGVSLKTPDITVRIEVRQGDFLVALR
type: DOMAIN
name: THUMP_dom
description: THUMP domain

phrase: VIIDVRHPSESEQSPLTLTNNEVLHIPFYELNQKIAELPADRQYLLYCDRGSMSRMHAGHLKAEGYGNVKV
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain

phrase: SIESVMTLISGGYDSSVAAYLMMRRGLRTHFLFFNLGGTAHEVGVKQVVHYIWQRYGSSHHAKFISVPFDAVVAEIMTSVNHRHWGVVLKREMLRAASAIADENNTMGLVMGDAVAQVSSQTLANLNVVDRACDQVVLRPLISMDKENIIKIARDIGTEPFARTMPEYCGVISQKPATRAKLDRVLHDEEQ
type: DOMAIN
name: ThiI_AANH
description: Thil, AANH domain

phrase: VIIDVRHPSESEQSPLTLTNNEVLHIPFYELNQKIAELPADRQYLLYCDRGSMSRMHAGHLKAEGYGNVKVY
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain

phrase: GQVVDELVRIPGISTIQEVAVYPLVSMDDVAEKAVAAFAASLAGKTFVVRAKRLGDHSFTSIELERFVGGALLQASEAKGVSLKTPDITVRIEVRQGDFLVALR
type: DOMAIN
name: THUMP_dom
description: THUMP domain

phrase: SMDDVAEKAVAAFAASLAGKTFVVRAKRLGDHSFTSIELERFVGGALLQASEAKGVSLKTPDITVRIEVRQGDFLV
type: DOMAIN
name: THUMP_dom
description: THUMP domain
Protein sequence:
MTTITPDSGNREEPSESTGPSLGRGPVKTGTLTAVSHADQYRTTPEDAPVNQPGAPRPDQVRPTSLADLAARLGAGAPGPGEATGITHDSRAVRRGDVYAALPGARLHGADFAGQAADLGAAAILTDPSGAERAAATGLPVLVVPDPRGSMGELAAGIYGHPGRDLLQIGITGTSGKTTTAYLVEGGLRGAGHRTGLIGTVEMRIDDERIKSERTTPEATDLQALLAVMRERGVQSVAMEVSSHALVLGRVDGCVFDVAVFNNLSPEHMEFHSGMEDYFQAKAQLFTPHRSRVGVVNYDDMYGRRLVTEATVPITTFSAEGHPDADWRAEEVQVGTHGSTFTAVGPKGERIPARAPLPGPFNVANTLAAVVTLAVAGVDPETAADGIAAVPGVPGRLERVDAGQPYLAVVDYAHKTDAVESVLRSLRKVTEGRIHLVLGCGGDRDQSKRGPMGAAAARLADTAVFTSDNPRSEDPLAILAAMLAGAAEVPIHERGDVLVNADRASAIGAVVSRAEPDDTVLIAGKGHEQGQDIAGVVRPFDDRHVLRAAIERSLSHERSPRHERPNENNSQG

Annotated regions:
phrase: ITGTSGKTTTAYLVEGGLRGAGHRTGLIGTVEMRIDDERIKSERTTPEATDLQALLAVMRERGVQSVAMEVSSHALVLGRVDGCVFDVAVFNNLSPEHMEFHSGMEDYFQAKAQLFTPHRSRVGVVNYDDMYGRRLVTEATVPITTFSAEGHPDADWRAEEVQVGTHGSTFTAVGPKGERIPARAPLPGPFNVANTLAAVV
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRLERVDAGQPYLAVVDYAHKTDAVESVLRSLRKVTEGRIHLVLGCGGDRDQSKRGPMGAAAARLADTAVFTSDNPRSEDPLAILAAMLAGAAEVPIHERGDVLVNADRASAIGAVVSRAEPDDTVLIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: TGITHDSRAVRRGDVYAALPGARLHGADFAGQAADLGAAAILTDPSGAERAAATGLPVLVVPDPRGSMGELAA
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain
Protein sequence:
MGNWVVNHWFSVLFLVVWLGLNVFLFVDAFLKYEKADKYYYTRKILGSTLACARASALCLNFNSTLILLPVCRNLLSFLRGTCSFCSRTLRKQLDHNLTFHKLVAYMICLHTAIHIIAHLFNFDCYSRSRQATDGSLASILSSLSHDEKKGGSWLNPIQSRNTTVEYVTFTSIAGLTGVIMTIALILMVTSATEFIRRSYFEVFWYTHHLFIFYILGLGIHGIGGIVRGQTEESMNESHPRKCAESFEMWDDRDSHCRRPKFEGHPPESWKWILAPVILYICERILRFYRSQQKVVITKVVMHPSKVLELQMNKRGFSMEVGQYIFVNCPSISLLEWHPFTLTSAPEEDFFSIHIRAAGDWTENLIRAFEQQYSPIPRIEVDGPFGTASEDVFQYEVAVLVGAGIGVTPFASILKSIWYKFQCADHNLKTKKIYFYWICRETGAFSWFNNLLTSLEQEMEELGKVGFLNYRLFLTGWDSNIVGHAALNFDKATDIVTGLKQKTSFGRPMWDNEFSTIATSHPKSVVGVFLCGPRTLAKSLRKCCHRYSSLDPRKVQFYFNKENF

Annotated regions:
phrase: RILRFYRSQQKVVITKVVMHPSKVLELQMNKRGFSMEVGQYIFVNCPSISLLEWHPFTLTSAPEEDFFSIHIRAAGDWTENLIRAFEQQYSPIPRIEVDGPFGTASE
type: DOMAIN
name: FAD-bd_FR_type
description: FAD-binding domain, ferredoxin reductase-type

phrase: YEVAVLVGAGIGVTPFASILKSIWYKFQCADHNLKTKKIYFYWICRETGAFSWFNNLLTSLEQEMEELGKVGFLNYRLFLTGWDSNIVGHAALNFDKATDIVTGLKQKTSFGRPMWDNEFSTIATSHPKSVVGVFLCGPRTLAKSLRKC
type: DOMAIN
name: Fe_red_NAD-bd_6
description: Ferric reductase, NAD binding domain

phrase: LLSFLRGTCSFCSRTLRKQLDHNLTFHKLVAYMICLHTAIHIIAHLFNFDCYSRSRQATDGSLASILSSLSHDEKKGGSWLNPIQSRNTTVEYVTFTSIAGLTGVIMTIALILMVTSATEFIRRSYFEVFWYTHHLFIFYIL
type: DOMAIN
name: Fe3_Rdtase_TM_dom
description: Ferric reductase transmembrane component-like domain

phrase: VVITKVVMHPSKVLELQMNKRGFSMEVGQYIFVNCPSISLLEWHPFTLTSAPEEDFFSIHIRAAGDWTENLIRAFEQQYSPIPRIEVDGPFGT
type: DOMAIN
name: FAD-bd_8
description: FAD-binding 8
Protein sequence:
MYRKFRDDPSSVDPSWHDFLVDYNPESTGDSHTEPKPPAQARPAAPAPAPGPAPESVKTAASGNGSVSAPPPVAKQSGPPPAEGDENQVLRGAAAAVVKNMSQSLDLPTATSVRAIPAKLMIDNRVVVNNQLKRTRGGKISFTHLLGYALVQALKVFPNMNRHYAEIDGKPNAVTPAHVNLGLAIDLQGKDGKRSLVVAGIKRCETMSFGEFVAAYEDIVRRARDGKLTAEDFSGVTISLTNPGTIGTVHSVPRLMAGQGAIIGVGAMEYPAEFQGASPERIAELGIGKLITLTSTYDHRIIQGAESGDFLRTIHEMLLADDFWDEIFREMGVPYLPIRWSTDNPDSIVDKNARVMELIGAYRNRGHLMADIDPLRLDNTRFRSHPDLEVITHGLTLWDLDRVFKVNGFAGSEYKKLRDILGLLRDAYCRHIGVEYTHILDPEQLAWLEHRVETKHVKPTVAQQKYILSKLNAAEAFETFLQTKYVGQKRFSLEGAESVIPMMDAAIDQCAEYGLDEVVIGMPHRGRLNVLANIVGKPYSQIFSEFEGNLNPAQAHGSGDVKYHLGATGVYLQMFGDNDIQVSLTANPSHLEAVDPVLEGLVRAKQDLLDKGDGVDGDSVVPMMLHGDAAFAGQGVVAETLNLANLPGYRVGGTIHIICNNQIGFTTAPEYSRSSEYCTDVAKMIGAPIFHVNGDDPEACVWVAKLAVDFRQKFKKDVVIDMLCYRRRGHNEGDDPSMTNPAMYDVVDVKRGVRKTYTEALIGRGDIS

Annotated regions:
phrase: NAAEAFETFLQTKYVGQKRFSLEGAESVIPMMDAAIDQCAEYGLDEVVIGMPHRGRLNVLANIVGKPYSQIFSEFEGNLNPAQAHGSGDVKYHLGATGVYLQMFGDNDIQVSLTANPSHLEAVDPVLEGLVRAKQDLLDKGDGVDGDSVVPMMLHGDAAFAGQGVVAETLNLANLPGYRVGGTIHIICNNQIGFTTAPEYSRSSEYCTDVAKMIGAPIFHVNGDDPEACVWVAKLAVDFRQKFKKDVVIDMLCYRRRGHNEGDDPSMTNPAMYDVVDVKRGVRKTYTEALIGR
type: DOMAIN
name: DH_E1
description: Dehydrogenase, E1 component

phrase: DENQVLRGAAAAVVKNMSQSLDLPTATSVRAIPAKLMIDNRVVVNNQLKRTRGGKISFTHLLGYALVQALKVFPNMNRHYAEIDGKPNAVTPAHVNLGLAIDLQGKDGKRSLVVAGIKRCETMSFGEFVAAYEDIVRRARDGKLTAEDFSGVTISLTNPGTIGTVHSVPRLMAGQGAIIGVGAMEYPAEFQGASPERIAELGIGKLITLTSTYDHRIIQGAESGDFLRTIHEM
type: DOMAIN
name: 2-oxoacid_DH_actylTfrase
description: 2-oxoacid dehydrogenase acyltransferase, catalytic domain
Protein sequence:
MNQGKIWTVVNPAIGIPALLGSVTVIAILVHLAILSHTTWFPAYWQGGVKKAA

Annotated regions:
phrase: VIAILVHLAILSHTTW
type: CONSERVED_SITE
name: Antenna_alpha_CS
description: Antenna complex, alpha subunit conserved site

phrase: GKIWTVVNPAIGIPALLGSVTVIAILVHLAILSHTTW
type: DOMAIN
name: Antenna_a/b
description: Antenna complex, alpha/beta subunit
Protein sequence:
MRVDDFDFELPPELIARRPLAERSSSRLLCLDAETGEINHRGFKDLLGMVNPGDLLVFNDTRVIPARLFGQKRSGGKVEVMVERVVSMTEMLAHVRASKAPKPGVEILIEENYVLTMVEREGDLFRLRVSQGGSVSELLERCGHMPLPPYIDREDDLSDRERYQTVYSRQPGAVAAPTAGLHFDEALLLAMSQKGVETAFVTLHVGAGTFQPVRVDVVQDHQMHSEYLEVSADVCERVRQVKAAGGRVVAVGTTAVRALETASRSGSIEPYAGDTSIFIYPGYEFVTVDALVTNFHLPKSTLLMLVSAFAGREHILAAYQEAIEQRYRFFSYGDAMFLHRRQSGLEDAGAN

Annotated regions:
Protein sequence:
MIKKTIPLVAAAVLTSLTPLNLSASELATPSNQFWWPKQLDLDPLRNHNNRSNPYGDSFDYAAAFSSIDLEALKADIETTLTTSQDWWPADWGHYGGLMIRMAWHSAGTYRVHDGRGGADGGQQRFNPLNSWPDNANLDKARRLLWPVKQKYGRNISWADLMILAGNVALESMGFETLGFAGGRVDDWEADEVYWGAETKMLGNDKRYRDGKLEKPLAAVQMGLIYVNPEGPNGNHDPLAAAADMRESFGRMAMNDEEIVALVAGGHTLGKAHGARKGDCVGPEPGAAPIEDQGLGWQNKCGKGNAEDTLTSGLEGAWTSTPTAWSILYLDNLFRFQWQQSKSPAGATQWAPIDEAAQQLVPDAHIDGKRHPPVMFTTDMALKKDPGFRAIAERFWKNPKAFDQAFARAWFKLTHRDLGPRSRYLGSEVPEQQFIWQDPIPALDHTLIDDSQVEALKGKILDSGLSVSELVRTAWASASSYRGSDMRGGANGARIALAPQKGWPANSPDELARVLQTLTEVQQGFNQSLPEGTKVSLADTIVLGGTAAIEQAAKSGGMDVKVPFKPGRTDASQEMTDVESFAVLEPNADAFRNYYSPAAYGSPTEMLIEKADLLGLSIPEMTALIGGMRVLDANSAGSRHGILTDQPGTLSNDFFVNLLDMSTRWEKAEDGVYQGVDRASDKPKWTATSVDLIFGSNTELRAVAETYASSDGQVEFIEDFIAAWSKVMLADRFELN

Annotated regions:
phrase: ADWGHYGGLMIRMAWHSAGTYRVHDGRGGADGGQQRFNPLNSWPDNANLDKARRLLWPVKQKYGRNISWADLMILAGNVALESMGFETLGFAGGRVDDWEADEVYWGAETKMLGNDKRYRDGKLEKPLAAVQMGLIYVNPEGPNGNHDPLAAAADMRESFGRMAMNDEEIVALVAGGHTLGKAHGARKGDCVGPEPGAAPIEDQGLGWQNKCGKGNAEDTLTSGLEGAWTSTPTAWSILYLDNLFRFQWQQSKSPAGATQWAPIDEAAQQLVPDAHIDGKRHPPVMFTTDMALKKDPGFRAIAERFW
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: SELVRTAWASASSYRGSDMRGGANGARIALAPQKGWPANSPDELARVLQTLTEVQQGFNQSLPEGTKVSLADTIVLGGTAAIEQAAKSGGMDVKVPFKPGRTDASQEMTDVESFAVLEPNADAFRNYYSPAAYGSPTEMLIEKADLLGLSIPEMTALIGGMRVLDANSAGSRHGILTDQPGTLSNDFFVNLLDMSTRWEKAEDGVYQGVDRASDKPKWTATSVDLIFGSNTELRAVAETYA
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: LDKARRLLWPVKQKYGRNISWADLMILAGNVALESMGFETLGFAGGRVDDWEADEVYWGAETKMLGNDKRYRDGKLEKPLAAVQMGLIYVNPEGPNGNHDPLAAAADMRESFGRMAMNDEEIVALVAGGHTLGKAHGARKGDCVGPEPGAAPIEDQGLGWQNKCGKGNAEDTLTSGLEGAWTSTPTAWSILYLDNLFRFQWQQSKSPAGATQWAPIDEAAQQLVPDAHIDGKRHPPVMFTTDMALKKDPGFRAIAERFWKNPKAFDQAFARAWFKLTHRDLGPRSRYLGSE
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: GGLMIRMAWHS
type: ACTIVE_SITE
name: Peroxidases_AS
description: Peroxidase, active site

phrase: GGLMIRMAWHSAGT
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: ISWADLMILAGNVALES
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: GFETLGFAGGRV
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: IVALVAGGHTLGKAH
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: WTSTPTAWSILYLDN
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase