nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSVELWQQCVELLRDELPAQQFNTWIRPLQVEAEGDELRVYAPNRFVLDWVNEKYLGRVLELLDEHGNGMAPVLSLLIGSKRSSAPRAAPNAPLAAAASQALQAAAANAAPAAAPAPAPAPTSAPAKKAAAQKAAEVSEEPSRDSFDPMAGASSQQAPVRAEQRTVQVEGALKHTSYLNRTFTFENFVEGKSNQLARAAAWQVADNPKHGYNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYLHSERFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFARKERSQEEFFHTFNALLEGGQQVILTSDRYPKEIEGLEERLKSRFGWGLTVAVEPPELETRVAILMKKADQAKVELPHDAAFFIAQRIRSNVRELEGALKRVIAHSHFMGRDITIELIRESLKDLLALQDKLVSVDNIQRTVAEYYKIKISDLLSKRRSRSVARPRQVAMALSKELTNHSLPEIGDVFGGRDHTTVLHACRKINELKESDADIREDYKNLLRTLTT

Annotated regions:
phrase: SVDNIQRTVAEYYKIKISDLLSKRRSRSVARPRQVAMALSKELTNHSLPEIGDVFGGRDHTTVLHACRK
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: GYNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYLHSERFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFARKERSQEEFFHTFNALLEGGQQVILTSDRYPKEIEGLEERLKSRFGWGLTVAVEPPELETRVAILMKKADQAKVELPHDAAFFIAQRIRSNVRELEGALKRVIAHSHFMGRDITIELIRESLKDLLA
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: ELWQQCVELLRDELPAQQFNTWIRPLQVEAEGDELRVYAPNRFVLDWVNEKYLGRVLELL
type: DOMAIN
name: DnaA_N_dom
description: DnaA N-terminal domain

phrase: IGDVFGGRDHTTVLHACRK
type: CONSERVED_SITE
name: Chromosome_initiator_DnaA_CS
description: Chromosomal replication control, initiator DnaA, conserved site

phrase: LNRTFTFENFVEGKSNQLARAAAWQVADNPKHGYNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYLHSERFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFARKERSQEEFFHTFNALLEGGQQVILTSDRYPKEIEGLEERLKSRFGWGLT
type: DOMAIN
name: DnaA_dom
description: Chromosomal replication initiator protein DnaA, ATPAse domain

phrase: VDNIQRTVAEYYKIKISDLLSKRRSRSVARPRQVAMALSKELTNHSLPEIGDVFGGRDHTTVLHACRK
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: VDNIQRTVAEYYKIKISDLLSKRRSRSVARPRQVAMALSKELTNHSLPEIGDVFGGRDHTTVLHACRKINELKESDADIREDYKNLLRT
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal
Protein sequence:
MAKILYGNEVALKIKEDLNLRIGKLKEKNIIPKLAILRMGNKPDDIAYERSIIKSCEKLNIETKVEELNEDILEEDFLKLMESLNNEKETHGILVFRPYPKHLNENIINSSIALNKDVDCMHPLNLERIFEGDLNGFMPCTPEAVIEILKYYDIDLKGKNIVIINRSMVVGKPLSMMVLSHNATVTICHSKTIDLPSITKRADIVVTAIGKAKLIKEEYFNEDSIVIDVSINVDENGKLCGDVDFENVKEKVGAITPVPKGVGSVTTTLLLKHIVDAAERNS

Annotated regions:
phrase: HPLNLERIFEGDLNGFMPCTPEAVIEILKYYDIDLKGKNIVIINRSMVVGKPLSMMVLSHNATVTICHSKTIDLPSITKRADIVVTAIGKAKLIKEEYFNEDSIVIDVSINVDENGKLCGDVDFENVKEKVGAITPVPKGVGSVTTTLLLKHIVDAAER
type: DOMAIN
name: THF_DH/CycHdrlase_NAD-bd_dom
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain

phrase: KDVDCMHPLNLERIFEGDLNGFMPCTPEAVIEILKYYDIDLKGKNIVIINRSMVVGKPLSMMVLSHNATVTICHSKTIDLPSITKRADIVVTAIGKAKLIKEEYFNEDSIVIDVSINVDENGKLCGDVDFENVKEKVGAITPVPKGVGSVTTTLLLKHIVDAA
type: DOMAIN
name: THF_DH/CycHdrlase_NAD-bd_dom
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain

phrase: LYGNEVALKIKEDLNLRIGKLKEKNIIPKLAILRMGNKPDDIAYERSIIKSCEKLNIETKVEELNEDILEEDFLKLMESLNNEKETHGILVFRPYPKHLNENIINSSIALNKDV
type: DOMAIN
name: THF_DH/CycHdrlase_cat_dom
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
Protein sequence:
MTTVNLDLQNSLVAEKNRGKITQIIGPVMDISFLPGQMPNIYNCLTVKGKNASGDFIDVTCEVQQLLGDNKVRAVAMSATDGLMRGMEVIDTGSPLSVPVGETTLGRIFNVLGEPVDNLGPVDTSITFPIHRAAPAFTQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLDSTSTMLQPWIVGEEHYETAQGVKETLQRYKELQDIIAILGLDELSEEDRLIVARARKIERFLSQPFFVAEVFTGSPGKYVSLIDTIKGFQMILSGELDHLPEQAFYLVGDIEEATAKAATIQVQSE

Annotated regions:
phrase: GIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRNLAAKGIYPAVDPLDST
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_nucl-bd
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain

phrase: ITQIIGPVMDISFLPGQMPNIYNCLTVKGKNASGDFIDVTCEVQQLLGDNKVRAVAMSATDGLMRGMEVIDT
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_N
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain

phrase: VGEEHYETAQGVKETLQRYKELQDIIAILGLDELSEEDRLIVARARKIERFLSQPFFVAEVFTGSPGKYVSLIDTIKGFQMI
type: DOMAIN
name: ATP-synt_VA_C
description: ATP synthase A/B type, C-terminal domain

phrase: PAVDPLDST
type: ACTIVE_SITE
name: ATPase_a/bsu_AS
description: ATPase, alpha/beta subunit, nucleotide-binding domain, active site

phrase: RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESKVINEENISESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRN
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain
Protein sequence:
MQEINRDAQTIAAVATAVAPGQGGIAVIRLSGPQAQAAVQSVTRIPGQQSWESHRVLYGHVLAGESGERIDEVLVLLMLAPRSFTGEDVVEIHCHGGVIAVQRVLARVLDQPGVRRALPGEFSQRAVLNGRLDLTRAEAISDLVAARSQRAAELAMAGVDGGIQKRITALRDRLLDQLSELEARVDFEEDLPALDGAALLEELQRVRGALQQLVKDGQVGAALRQGLRVALVGRPNVGKSSLLNRLSRRERAIVTDLPGTTRDLLESEIVLEGVPITLLDTAGIRATSDAVERLGIARSHDALASADLVLLLFDLSVGWTPDDEALRQRIPAAVPHLLVGNKVDVAVSDARAGTSGSAADIRLSASTGAGEAELVQAVLERCGALADGSLLLSLNQRQGDLAQQAADALARSAQVAADGLPWDFWTIDLRQAIHSLGEITGEELTESVLDRIFSRFCIGK

Annotated regions:
phrase: LTRAEAISDLVAARSQRAAELAMAGVDGGIQKRITALRDRLLDQLSELEARVDFEEDLPALDGAALLEELQRVRGALQQLVKDGQVGAALRQGLRVALVGRPNVGKSSLLNRLSRRERAIVTDLPGTTRDLLESEIVLEGVPITLLDTAGIRATSDAVERLGIARSHDALASADLVLLLFDLSVGWTPDDEALRQRIPAAVPHLLVGNKVDVAVSDARAGTSGSAADIRLSASTGAGEAELVQAVLERCGALADGSLLLSLNQRQGDLAQQAADALARSAQVAADGLPWDFWTIDLRQAIHSLGEITGEELTESVLDRIFSRF
type: DOMAIN
name: MnmE_helical
description: MnmE, helical domain

phrase: RQGLRVALVGRPNVGKSSLLNRLSRRERAIVTDLPGTTRDLLESEIVLEGVPITLLDTAGIRATSDAVERLGIARSHDALASADLVLLLFDLSVGWTPDDEALRQRIPAAVPHLLVGNKVDVAVSDARAGTSGSAADIRLSASTGAGEAELVQAVLERC
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain

phrase: PGQGGIAVIRLSGPQAQAAVQSVTRIPGQQSWESHRVLYGHVLAGESGERIDEVLVLLMLAPRSFTGEDVVEIHCHGGVIAVQRVLARVLDQPGVRRALPGEFSQRAVLN
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal

phrase: TIAAVATAVAPGQGGIAVIRLSGPQAQAAVQSVTRIPGQQSWESHRVLYGHVLAGESGERIDEVLVLLMLAPRSFTGEDVVEIHCHGGVIAVQRVLARVLDQPGVRRALPGEFSQRAVLNG
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal

phrase: GLRVALVGRPNVGKSSLLNRLSRRERAIVTDLPGTTRDLLESEIVLEGVPITLLDTAGIRATSDAVERLGIARSHDALASADLVLLLFDLSVGWTPDDEALRQRIPAAVPHLLVGNKVDVAVSDARAGTSGSAADIRLSASTGAGEAELVQAVLERC
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain

phrase: RVALVGRPNVGKSSLLNRLSRRERAIVTDLPGTTRDLLESEIVLEGVPITLLDTAGIRATSDAVERLGIARSHDALASADLVLLLFDLSVGWTPDDEALRQRIPAAVPHLLVGN
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: LRVALVGRPNVGKSSLLNRLSRRERAIVTDLPGTTRDLLESEIVLEGVPITLLDTAGIRATSDAVERLGIARSHDALASADLVLLLFDLSVGWTPDDEALRQRIPAAVPHLLVGNKVDVA
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain
Protein sequence:
MKVNLQTEFKQTQIQQVLDDLDRELIGLQAVKTRIREIAALLLVDRLRQKLGLSSSNPGLHMSFTGSPGTGKTTVATKMADILYRLGYIKKGHLITVTRDDLVGQYIGHTAPKTKQVLKNAMGGVLFIDEAYYLYRPDNERDYGAEAIEILLQVMENQRDDLVIIFAGYKEKMDRFYASNPGLSSRVANHVNFPDYTPEELLMIGKIMLQEQQYQFTPEAEEVFLQYIQRRMQQPHFANARSVRNALDRARLRQANRIFATPGQNLTKYDLVTIQAEDILKCRLFQ

Annotated regions:
phrase: SFTGSPGTGKTTVATKMADILYRLGYIKKGHLITVTRDDLVGQYIGHTAPKTKQVLKNAMGGVLFIDEAYYLYRPDNERDYGAEAIEILLQVMENQRDDLVIIFAGYKEKMDRFYASNPGLSSRVANHVNF
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: PGLHMSFTGSPGTGKTTVATKMADILYRLGYIKKGHLITVTRDDLVGQYIGHTAPKTKQVLKNAMGGVLFIDEAYYLYRPDNERDYGAEAIEILLQVMENQRDDLVIIFAGYKEKMDRFYASNPGLSSRVANHVNFPDY
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: PEAEEVFLQYIQRRMQQPHFANARSVRNALDRARLRQANRIFATPGQNLTKYDLVTIQAED
type: DOMAIN
name: AAA_lid_6
description: CbbX, AAA lid domain
Protein sequence:
MENILDYNEAELKQWMDKNGEKTFRAKQFFDWIYNGTFDFKDMKNLPQSTRERLEKNFYIGMPSVVKRLNSKKGDTVKFLFRYNDGNIIECVVMKYDYGNSICISTQVGCRMGCSFCASTIGGRVRDLTSGEILAQILKAQKEIGERISNIVLMGSGEPLDNYDNVIKFIRIVNSEKGLNIGQRHITLSTCGIVPRIYDLMKENLQITLAISLHASDDETRKKIMPIANRYSISEIIDCCKKYSDFTGRRITFEYSLVKDVNDDKESAKKLGELLSGMLCHVNLIPVNTVNETSYEKPESSKIKKFCDTLLKYKIESTIRKEMGADINAACGQLRRNYIEESEGK

Annotated regions:
phrase: ENILDYNEAELKQWMDKNGEKTFRAKQFFDWIYNGTFDFKDMKNLPQSTRERLEKNFYIGMPSVVKRLNSKKGDTVKFLFRYNDGNIIECVVMKYDYGNSICISTQVGCRMGCSFCASTIGGRVRDLTSGEILAQILKAQKEIGERISNIVLMGSGEPLDNYDNVIKFIRIVNSEKGLNIGQRHITLSTCGIVPRIYDLMKENLQITLAISLHASDDETRKKIMPIANRYSISEIIDCCKKYSDFTGRRITFEYSLVKDVNDDKESAKKLGELLSGMLCHVNLIPVNTVNETSYEKPESSKIKKFCDTLLKYKIESTIRKEMGADINAACGQLRRNYIEE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: YDYGNSICISTQVGCRMGCSFCASTIGGRVRDLTSGEILAQILKAQKEIGERISNIVLMGSGEPLDNYDNVIKFIRIVNSEKGLNIGQRHITLSTCGIVPRIYDLMKENLQITLAISLHASDDETRKKIMPIANRYSISEIIDCCKKYSDFTGRRITFEYSLVKDVNDDKESAKKLGELLSGMLCHVNLIPVNTVNETSYEKPESSKIKKFCDTLLKYKIESTIRKEMGA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: ISTQVGCRMGCSFCASTIGGRVRDLTSGEILAQILKAQKEIGERISNIVLMGSGEPLDNYDNVIKFIRIVNSEKGLNIGQRHITLSTCGIVPRIYDLMKENLQITLAISLHASDDETRKKIMPIANRYSISEIIDCCKKYSDFTGRRITFEYSLVKDVNDD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: NILDYNEAELKQWMDKNGEKTFRAKQFFDWIYNGTFDFKDMKNLPQSTRERLEKNFY
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: NSICISTQVGCRMGCSFCASTIGGRVRDLTSGEILAQILKAQKEIGERISNIVLMGSGEPLDNYDNVIKFIRIVNSEKGLNIGQRHITLSTCGIVPRIYDLMKENLQITLAISLHASDDETRKKIMPIANRYSISEIIDCCKKYSDFTGRRITFEYSLVKDVNDDKESAKKLGELLSGMLCHVNLIPVNTVNETSYEKPESSKIKKFC
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain
Protein sequence:
MKILLFICGEGLGHTGRCLALGKEFLAAGHEVNFGAYGYSKGLVQKTGYSAYEIPSEIKLAGEAGTFDIRKSIKETLNNLSPSGFRKILRLIEKLDPDVVLSDGYYTGILAAQKRKVPVYFIGHQFNMEEFFWKKGLFAGIAGIFVKRFYNYVFSSVDGIIVPDYPLPYSVNRKNFTISRAVNDNIFFSGPLIRCRYQEAGEKAFKRPNVLSTIGAFGYRAAVFRNVLEAAKLDPSIYYTFISGPEIDPEQFSKVPENVEFTGFTENPFPYYKGSDLVITAGGHGTIMESLAFGLPILSFPDEKHAEQENNASVLEEAGYGKRMSYLTPPEVILACIREIFEDENYSKKTRRLMELAEVLDGPAAVRKFLEEKHRG

Annotated regions:
phrase: LALGKEFLAAGHEVNFGAYGYSKGLVQKTGYSAYEIPSEIKLAGEAGTFDIRKSIKETLNNLSPSGFRKILRLIEKLDPDVVLSDGYYTGILAAQKRKVPVYFIGHQFNMEEFFWKKGLFAGIAGIFVKRFYNYVFSSVDGIIV
type: DOMAIN
name: Glyco_trans_4-like_N
description: Glycosyltransferase subfamily 4-like, N-terminal domain

phrase: PEQFSKVPENVEFTGFTENPFPYYKGSDLVITAGGHGTIMESLAFGLPILSFPDEKHAEQENNASVLEEAGYGKRMSYLTPPEVILACIREIFEDENYS
type: DOMAIN
name: Glyco_trans_28_C
description: Glycosyl transferase, family 28, C-terminal
Protein sequence:
MQTPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSEYDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLSRTMNLGTVSEERRSVESYKFNGWELDINSRSLIGPDGEQYKLPRSEFRAMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRFCGDLED

Annotated regions:
phrase: VESYKFNGWELDINSRSLIGPDGEQYKLPRSEFRAMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYRFC
type: DOMAIN
name: OmpR/PhoB-type_DNA-bd
description: OmpR/PhoB-type DNA-binding domain

phrase: GEQYKLPRSEFRAMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYR
type: DOMAIN
name: OmpR/PhoB-type_DNA-bd
description: OmpR/PhoB-type DNA-binding domain

phrase: WELDINSRSLIGPDGEQYKLPRSEFRAMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYR
type: DOMAIN
name: OmpR/PhoB-type_DNA-bd
description: OmpR/PhoB-type DNA-binding domain

phrase: PHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSEYDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIR
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: ILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSEYDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTI
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: HILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSEYDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNL
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: GEQYKLPRSEFRAMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDTPEIIATIHGEGYR
type: DOMAIN
name: OmpR/PhoB-type_DNA-bd
description: OmpR/PhoB-type DNA-binding domain
Protein sequence:
MSTNPKPQRKTKRNTNRRPQDVKFPGGGQIVGGVYLLPRRGPRLGVRATRKTSERSQPRGRRQPIPKARRPEGRTWAQPGYPWPLYGNEGCGWAGWLLSPRGSRPSWGPTDPRRRSRNLGKVIDTLTCGFADLMGYIPLVGAPLGGAARALAHGVRVLEDGVNYATGNLPGCSFSIFLLALLSCLTVPASAYQVRNSSGLYHVTNDCPNLSIVYETADTILHSPGCVPCVREGNASKCWVAVAPTVATRDGKLPTTQLRRHIDLLVGSATLCSALYVGDLCGSVFLVGQLFTFSPRRHWTTQDCNCSIYPGHITGHRMAWDMMMNWSPTTALVVAQLLRVPQAILDMIAGAHWGVLAGIAYFSMVGNWAKVLIVLLLFAGVDAETRVTGGSAAHTMSGLTGLLAPGPKQNIQLINTNGSWHINRTALNCNASLDTGWVAGLFYYHKFNSSGCPERMASCRPLADFAQGWGPISYANGSGPEHRPYCWHYPPKPCGIVPARNVCGPVYCFTPSPVVVGTTNRLGLPTYNWGENDTDVFVLNNTRPPLGNWFGCTWMNSSGFTKVCGAPPCNIGGGPNNTLHCPTDCFRKHPEATYSRCGSGPWLTPRCMVHYPYRLWHYPCTINYTLFKVRMYVGGVEHRLEVACNWTRGERCDLDDRDRSELSPLLLSTTQWQVLPCSFTTLPALTTGLIHLHQNIVDVQYLYGVGSSIVSWAIKWEYVILLFLLLADARVCSCLWMMLLISQAEAALENLVLLNAASLAGTHGLVSF

Annotated regions:
phrase: SRNLGKVIDTLTCGFADLMGYIPLVGAPLGGAARALAHGVRVLEDGVNYATGNLPGCSFSIFLLALLSCLTVPA
type: DOMAIN
name: HCV_Core_C
description: Hepatitis C virus, Core protein, C-terminal

phrase: QVRNSSGLYHVTNDCPNLSIVYETADTILHSPGCVPCVREGNASKCWVAVAPTVATRDGKLPTTQLRRHIDLLVGSATLCSALYVGDLCGSVFLVGQLFTFSPRRHWTTQDCNCSIYPGHITGHRMAWDMMMNWSPTTALVVAQLLRVPQAILDMIAGAHWGVLAGIAYFSMVGNWAKVLIVLLLFAGV
type: DOMAIN
name: HCV_Env
description: Hepatitis C virus, Envelope glycoprotein E1

phrase: STNPKPQRKTKRNTNRRPQDVKFPGGGQIVGGVYLLPRRGPRLGVRATRKTSERSQPRGRRQPIPKARRPEGRTWAQPGYPWPLYGNEGCGWAGWLLSPRGSRPSWGPTDPRR
type: DOMAIN
name: HCV_core_N
description: Hepatitis C virus, Core protein, N-terminal

phrase: VTGGSAAHTMSGLTGLLAPGPKQNIQLINTNGSWHINRTALNCNASLDTGWVAGLFYYHKFNSSGCPERMASCRPLADFAQGWGPISYANGSGPEHRPYCWHYPPKPCGIVPARNVCGPVYCFTPSPVVVGTTNRLGLPTYNWGENDTDVFVLNNTRPPLGNWFGCTWMNSSGFTKVCGAPPCNIGGGPNNTLHCPTDCFRKHPEATYSRCGSGPWLTPRCMVHYPYRLWHYPCTINYTLFKVRMYVGGVEHRLEVACNWTRGERCDLDDRDRSELSPLLLSTTQWQVLPCSFTTLPALTTGLIHLHQNIVDVQYLYGVGSSIVSWAIKWEYVILLFLLLAD
type: DOMAIN
name: HCV_NS1
description: Hepatitis C virus, Non-structural protein E2/NS1
Protein sequence:
MSIIIGIDPGSYVTGYGIIKSEKNTLKHIKSGSIFLKKHDFKKRLKIIYICIKNIINKFKPKYFVIEQIFFSKNPSSVLKLGQASCAATLAAINLDILIFEYASKKIKKILVGDGKAKKLQVKNKVCSILNLSKSIGIDTSDALAVAITHHYLINNKDKIF

Annotated regions:
phrase: GDGKAKKLQVKNKVCSILNLSKSIGIDTSDALAV
type: BINDING_SITE
name: X-over_junc_endoDNase_Mg_BS
description: Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site
Protein sequence:
MPASTSIPETPSKLPDALLVNSDPASKVDNVSVKIEQESPLALEGSPLPTVSDVLPETNNAHEEVSSSSWSLSSSDSIMSYDSLSDDVSVLSFLDCPLTTFETAPSIASFSNSAADVSSHSRSSSSWSAKLSRFTKHASKPSLSSNSSDSSFSKSGSESNALSSRGSFELEPHGIHRHVSRAKRLLSKFYSKFHHKKEDSSFDPLAPLVFAPNTSRVLRVTNEANASAISLEKATSLSSQEQPGSEIKKELSLYDHEFDQILDLAIKAKKDGNLENAIEFLEYIMPEVASQQNFVPYELAELYKQRGTSQDLKSILPLYMLAASLGHDRSSFLVGEAFFYGTYGARENKLRALQYYHLANDKGNADAMLALCKLYLRGLPGHIFPSSRRAFEYAHRAAMLGHAPACYVLGKFYETGVGCVKDLAKSEAGFRAGLINDSPITDADALQIASTLVLLQ

Annotated regions:
phrase: FLVGEAFFYGTYGARENKLRALQYYHLANDKG
type: REPEAT
name: Sel1-like
description: Sel1-like repeat

phrase: APACYVLGKFYETGVGCVKDLA
type: REPEAT
name: Sel1-like
description: Sel1-like repeat

phrase: ADAMLALCKLYLRGLPGHIFPSSRRAFEYAHRAAMLG
type: REPEAT
name: Sel1-like
description: Sel1-like repeat

phrase: DRSSFLVGEAFFYGTYGARENKLRALQYYHLANDKG
type: REPEAT
name: Sel1-like
description: Sel1-like repeat

phrase: APACYVLGKFYETGVGCVKDLAKSEAGFRAGLIND
type: REPEAT
name: Sel1-like
description: Sel1-like repeat

phrase: ADAMLALCKLYLRGLPGHIFPSSRRAFEYAHRAAMLG
type: REPEAT
name: Sel1-like
description: Sel1-like repeat

phrase: NFVPYELAELYKQRGTSQDLKSILPLYMLAASLG
type: REPEAT
name: Sel1-like
description: Sel1-like repeat
Protein sequence:
MLLKDLTGEQVLAAPEFETEIAGLSADSRTVSRGFVFAALKGAKADGTRFITAARDAGAGALLVGSDTPLAALGPDEGCCPVIVSDDPRRTLALMAARFYERQPETLVAVTGTSGKTSVAVFVRQIFAHAGFEAASLGTIGTVTSRGAQYGSLTTPDPVSLHQTLARLADDGITHAALEASSHGLDQRRLDGLRLTAAAFTNLGRDHLDYHADVEDYLAAKMRLFDTLLEGDQPVVLEPSAPYAGRVLALAHELGRSVFTVGEGGDDLKLLDIRHDGFAQVLSIETIEGFFEVRLPLAGRFQVSNALVAAGLAICCGVPTSVALSALEDLQGAPGRLELIGETDDGALVFVDYAHKPDALDTALAALRPFTKGRLIVVFGAGGDRDPGKRPLMGQAAARQADIVIVTDDNPRSEDPAAIRAEVMDGAPEALEIGDRRDAIEAAIGMLQPGDVLCIAGKGHEPGQIVGDEVLPFSDHEVAREAIAALAESALFDAAEDGGINLGLDGARDLDDALEQALAESFDLSEEIAGETAEQTGEEDGLHLELSEDDLLDELFEEEDDRDADEAQDFALSEEAAEDELLAEDLAEEDLVDEDEVLEEGPSEEEPAEDELMAEMPQAEDAPADEDDLLAEDGSESRGFPEIRLTEEDLLADELLPADAEEGEGEQENGAEPFDAESETDEPASETEFVLELDADELLEGADEAEEDLSADEAPVDEIAQDEPGAEPLDEPATEDEIFAAADEPELEADIAPEPEVAPRPVAASVHP

Annotated regions:
phrase: GRLELIGETDDGALVFVDYAHKPDALDTALAALRPFTKGRLIVVFGAGGDRDPGKRPLMGQAAARQADIVIVTDDNPRSEDPAAIRAEVMDGAPEALEIGDRRDAIEAAIGMLQPGDVLCIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: VTGTSGKTSVAVFVRQIFAHAGFEAASLGTIGTVTSRGAQYGSLTTPDPVSLHQTLARLADDGITHAALEASSHGLDQRRLDGLRLTAAAFTNLGRDHLDYHADVEDYLAAKMRLFDTLLEGDQPVVLEPSAPYAGRVLALAHELGRSVFTVGEGGDDLKLLDIRHDGFAQVLSIETIEGFFEVRLPLAGRFQVSNALVAAGL
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: EIAGLSADSRTVSRGFVFAALKGAKADGTRFITAARDAGAGALLVGSD
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain
Protein sequence:
MGGVSTARPVIGVLALQGGVAEHLTALERSGAEARPVRRPEELAQVHGLVLPGGESTAMTRLLDGFELFEPLRERLAAGMPAFGSCAGMVLLAGTVLDDRVEQDTPPVRPFGAIDMAVRRNAFGRQVDSFEADLDFAGVTDGPVHAVFIRAPWVDKVGADVRVLASVAPSGHGSEVTAPAGRIVAVQQGPVLATAFHPELVSGDERVHRYFVQTVRAS

Annotated regions:
phrase: GLVLPGGEST
type: CONSERVED_SITE
name: PdxT/SNO_CS
description: PdxT/SNO family, conserved site
Protein sequence:
MASVGVAPTSGFREVLGDGEIGVDDILPEEMSDMKIRDDREMEATVVDGNGTETGHIIVTTIGGRNGQPKQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHYSKLNQRMPMIYVKLYTYQIFRALSYIHRCIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDVWSVGCVLAELLLGQPLFPGERGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPAEAVDLVSRLLQYSPNLRCQALDCLTHPFFDELRDPNARLPTGRFLPPLFNFKPHELKGVPVETLMKLVPEHARKQCPFLGL

Annotated regions:
phrase: YMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHYSKLNQRMPMIYVKLYTYQIFRALSYIHRCIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDVWSVGCVLAELLLGQPLFPGERGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPAEAVDLVSRLLQYSPNLRCQALDCLTHPF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: YMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHYSKLNQRMPMIYVKLYTYQIFRALSYIHRCIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDVWSVGCVLAELLLGQPLFPGERGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPAEAVDLVSRLLQYSPNLRCQALDCLTHPF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: VCHRDIKPQNLL
type: ACTIVE_SITE
name: Ser/Thr_kinase_AS
description: Serine/threonine-protein kinase, active site

phrase: VGHGSFGVVFQAKCLETGETVAIK
type: BINDING_SITE
name: Protein_kinase_ATP_BS
description: Protein kinase, ATP binding site

phrase: KQTISYMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHYSKLNQRMPMIYVKLYTYQIFRALSYIHRCIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDVWSVGCVLAELLLGQPLFPGERGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPAEAVDLVSRLLQYSPNLRCQALDCLTHPFFDE
type: DOMAIN
name: STKc_GSK3
description: Glycogen synthase kinase 3, catalytic domain

phrase: YMAERVVGHGSFGVVFQAKCLETGETVAIKKVLQDKRYKNRELQTMRLLDHPNVVSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHYSKLNQRMPMIYVKLYTYQIFRALSYIHRCIGVCHRDIKPQNLLVNPHTHQVKLCDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTAIDVWSVGCVLAELLLGQPLFPGERGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKAHPWHKIFHKRMPAEAVDLVSRLLQYSPNLRCQALDCLTHPF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain
Protein sequence:
MDATATDLRVSIAHQTRFAFRLAAALSSPRAHPAAGGAAGAGGSNVAFSPLSLHVALSLVAAGAGGATRDQLVSLLGVPGRGTAEGLHAFAEQVVQLVLADSSPAGGPRVAFADGVFIDSSLSLMKSFKDVAVGKYKAETHSVDFQTKAAEVASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFRLLDGKSVLAPFMSTSKKQYLSSYDSLKVLKLPYQKGRDLRQFSMYILLPEAQDGLWSLAAKLNSEPEFLEKRIPTRQVTVGKFKLPKFKISFGFEASDLLKILGLQLPFSSKADLTGMVGSPERHNLFVSSLFHKSFVQVDEEGTEAAAASAAVVSFRSAPVTVDFVADHPFLFLIREDMTGVVLFIGHVVNPLL

Annotated regions:
phrase: FVADHPFLFL
type: CONSERVED_SITE
name: Serpin_CS
description: Serpin, conserved site

phrase: AAGAGGSNVAFSPLSLHVALSLVAAGAGGATRDQLVSLLGVPGRGTAEGLHAFAEQVVQLVLADSSPAGGPRVAFADGVFIDSSLSLMKSFKDVAVGKYKAETHSVDFQTKAAEVASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFRLLDGKSVLAPFMSTSKKQYLSSYDSLKVLKLPYQKGRDLRQFSMYILLPEAQDGLWSLAAKLNSEPEFLEKRIPTRQVTVGKFKLPKFKISFGFEASDLLKILGLQLPFSSKADLTGMVGSPERHNLFVSSLFHKSFVQVDEEGTEAAAASAAVVSFRSAPVTVDFVADHPFLFLIREDMTGVVLFIGHVVN
type: DOMAIN
name: Serpin_dom
description: Serpin domain

phrase: QTRFAFRLAAALSSPRAHPAAGGAAGAGGSNVAFSPLSLHVALSLVAAGAGGATRDQLVSLLGVPGRGTAEGLHAFAEQVVQLVLADSSPAGGPRVAFADGVFIDSSLSLMKSFKDVAVGKYKAETHSVDFQTKAAEVASQVNSWVDRVTSGLIKEILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFRLLDGKSVLAPFMSTSKKQYLSSYDSLKVLKLPYQKGRDLRQFSMYILLPEAQDGLWSLAAKLNSEPEFLEKRIPTRQVTVGKFKLPKFKISFGFEASDLLKILGLQLPFSSKADLTGMVGSPERHNLFVSSLFHKSFVQVDEEGTEAAAASAAVVSFRSAPVTVDFVADHPFLFLIREDMTGVVLFIGHVVN
type: DOMAIN
name: Serpin_dom
description: Serpin domain
Protein sequence:
MQEASAAITAERKHSHVDICLNRPVCFDGQDTGLDSWRFEHNAAPEVDFAQIDLSTEFLGHAIGLPLMISSMTGGYGNALALNRALGEAAERFRIPLGVGSMRQALEGSSHRESFSVVRSSAPSVPIFANIGAPEVAAGLSRDQLSTLIDLIEANGLIVHLNPAQELFQPEGGTDFSGFLDRLHDITATIGVPVIAKEVGCGISATVARKLADAGVRAIDVAGAGGISWQKVEECRYLDRFGHEERFSPSALDEFLNWGIPTAECLTSIQTLKRQNPEYDALSVISSGGIRNGLDIAKSIALGANIAASAQHLLKALHSGTLEETIRTWANDLRAAMFLTGSATIEQLKHARIYRKP

Annotated regions:
phrase: DRLHDITATIGVPVIAKEVGCGISATVARKLADAGVRAIDVAGAGGISWQKVEECRYLDRFGHEERFSPSALDEFLNWGIPTAECLTSIQTLKRQNPEYDALSVISSGGIRNGLDIAKSIALGANIAASAQHLLKALHSGTLEETIRTWANDLRAAMFLTGSATIEQLKHAR
type: DOMAIN
name: FMN-dep_DH
description: FMN-dependent dehydrogenase