nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MNKAQGTIVSAISGYYDVEIENEVVRTRARGVFRDRKQKPLVGDRVVVQLDNQGMNYLIEILPRTNEIGRPAVANVSKVLLVISAVEPDFSLELLDRYLTFFAWKNVGVVIYLSKADITPTEKLKAIKCKLDYYQKIGYSVFEDAEELERQLPTMIQKDQIWTLAGQSGAGKSTLLNKLENEANQETGAISTALNRGKHTTRQVKLFKYSSGFIADTPGFSAIDLFKIKVDELENYFYDLKDASVKCKFRRCQHIKEPGCEVKKLIEEGKIAKSRYDSYLKIRQEISENRMPEYLKK

Annotated regions:
phrase: TNEIGRPAVANVSKVLLVISAVEPDFSLELLDRYLTFFAWKNVGVVIYLSKADITPTEKLKAIKCKLDYYQKIGYSVFEDAEELERQLPTMIQKDQIWTLAGQSGAGKSTLLNKLENEANQETGAISTALNRGKHTTRQVKLFKYSSGFIADTPGFSA
type: DOMAIN
name: G_CP_dom
description: Circularly permuted (CP)-type guanine nucleotide-binding (G) domain

phrase: QGTIVSAISGYYDVEIENEVVRTRARGVFRDRKQKPLVGDRVVVQLDNQGMN
type: DOMAIN
name: RsgA_N
description: Ribosome biogenesis GTPase RsgA, N-terminal

phrase: ILPRTNEIGRPAVANVSKVLLVISAVEPDFSLELLDRYLTFFAWKNVGVVIYLSKADITPTEKLKAIKCKLDYYQKIGYSVFEDAEELERQLPTMIQKDQIWTLAGQSGAGKSTLLNKLENEANQETGAISTALNRGKHTTRQVKLFKYSSGFIADTPGFSAID
type: DOMAIN
name: RsgA_GTPase_dom
description: RsgA GTPase domain

phrase: AQGTIVSAISGYYDVEIENEVVRTRARGVFRDRKQKPLVGDRVVVQLDNQGMNYLIEILPRTNEIG
type: DOMAIN
name: RsgA_N
description: Ribosome biogenesis GTPase RsgA, N-terminal

phrase: ANVSKVLLVISAVEPDFSLELLDRYLTFFAWKNVGVVIYLSKADITPTEKLKAIKCKLDYYQKIGYSVFEDAEELERQLPTMIQKDQIWTLAGQSGAGKSTLLNKLENEANQETGAISTALNRGKHTTRQVKLFKYSSGFIADTPGF
type: DOMAIN
name: RsgA_GTPase_dom
description: RsgA GTPase domain
Protein sequence:
MANESNNLGLEITELRLGLPGDIVVSGESISGKKRASPEVEIDLKCEPAKKSQVVGWPPVCSYRRKNSLERTKSSYVKVSVDGAAFLRKIDLEMYKCYQDLASALQILFGCYINFDDTLKESECVPIYEDKDGDWMLAGDVPWEMFLGSCKRLRIMKRSCNRG

Annotated regions:
phrase: EVEIDLKCEPAKKSQVVGWPPVCSYRRKNSLERTKSSYVKVSVDGAAFLRKIDLEMYKCYQDLASALQILFGCYINFDDTLKESECVPIYEDKDGDWMLAGDVPWEMFLGSCKRLRIMKR
type: DOMAIN
name: AUX/IAA_dom
description: AUX/IAA domain

phrase: SSYVKVSVDGAAFLRKIDLEMYKCYQDLASALQILFGCYINFDDTLKESECVPIYEDKDGDWMLAGDVPWEMFLGSCKRLRIMKRS
type: DOMAIN
name: PB1-like
description: PB1-like domain
Protein sequence:
MKYQQLENLESGWKWKYLVKKHREGELITRYIEASAAQEAVDELLSLENEPVLVNGWIDKHMNPELVNRMKQTIRARRKRHFNAEHQHTRKKSIDLEFIVWQRLAGLAQRRGKTLSETIVQLIEDAENKEKYANKMSSLKQDLQALLGKE

Annotated regions:
phrase: HTRKKSIDLEFIVWQRLAGLAQRRGKTLSETIVQLIEDAENKEKYANKMSSLKQDLQAL
type: DOMAIN
name: MatP_C
description: MatP, C-terminal ribbon-helix-helix domain

phrase: KYQQLENLESGWKWKYLVKKHREGELITRYIEASAAQEAVDELLSLENEPVLVNGWIDKHMNPELVNRMKQTIRARRKRHFNA
type: DOMAIN
name: MatP_N
description: MatP, N-terminal
Protein sequence:
MQLKPMEINPEMLNKVLTRLGVGGDWKFVDVLGLEEDVLGTVPAPACALLLLFPLTAQHENFRKKQIEELKGQEVSPKVYFMKQTVGNSCGTIGLIHAVANNQDKLNFDDGSVLKQFISETAKLSPEDRAKCFEKNEAIQAAHDAVAQEGQCRVDDEVNFHFILFNNVDGHLYELDGRMPFPINHGSNSDESVLKGAAEICRQFTEREEGEVRFSAVALCKCA

Annotated regions:
phrase: PMEINPEMLNKVLTRLG
type: DOMAIN
name: Peptidase_C12_UCH
description: Peptidase C12, ubiquitin carboxyl-terminal hydrolase

phrase: VPAPACALLLLF
type: DOMAIN
name: Peptidase_C12_UCH
description: Peptidase C12, ubiquitin carboxyl-terminal hydrolase

phrase: QTVGNSCGTIGLIHAVA
type: DOMAIN
name: Peptidase_C12_UCH
description: Peptidase C12, ubiquitin carboxyl-terminal hydrolase

phrase: DEVNFHFILFN
type: DOMAIN
name: Peptidase_C12_UCH
description: Peptidase C12, ubiquitin carboxyl-terminal hydrolase

phrase: LYELDGRMPF
type: DOMAIN
name: Peptidase_C12_UCH
description: Peptidase C12, ubiquitin carboxyl-terminal hydrolase

phrase: PMEINPEMLNKVLTRLGVGGDWKFVDVLGLEEDVLGTVPAPACALLLLFPLTAQHENFRKKQIEELKGQEVSPKVYFMKQTVGNSCGTIGLIHAVANNQDKLNFDDGSVLKQFISETAKLSPEDRAKCFEKNEAIQAAHDAVAQEGQCRVDDEVNFHFILFNNVDGHLYELDGRMPFPINHGSNSDESVLKGAAEICRQF
type: DOMAIN
name: Peptidase_C12_UCH
description: Peptidase C12, ubiquitin carboxyl-terminal hydrolase

phrase: LKPMEINPEMLNKVLTRLGVGGDWKFVDVLGLEEDVLGTVPAPACALLLLFPLTAQHENFRKKQIEELKGQEVSPKVYFMKQTVGNSCGTIGLIHAVANNQDKLNFDDGSVLKQFISETAKLSPEDRAKCFEKNEAIQAAHDAVAQEGQCRVDDEVNFHFILFNNVDGHLYELDGRMPFPINHGSNSDESVLKGAAEICRQFTEREEGEVRFSAVALC
type: DOMAIN
name: Peptidase_C12_UCH
description: Peptidase C12, ubiquitin carboxyl-terminal hydrolase

phrase: QTVGNSCGTIGLIHAV
type: DOMAIN
name: Peptidase_C12_UCH
description: Peptidase C12, ubiquitin carboxyl-terminal hydrolase
Protein sequence:
MIFNRSVTYSNARLPYSKRSLYTKTRVLFFLKQKILSRVTTKMAIADLDKQPDSVSSVLKVFGILQALGEEREIGITELSQRVMMSKSTVYRFLQTMKSLGYVAQEGESEKYSLTLKLFELGAKALQNVDLIRSADIQMRELSALTRETIHLGALDEDSIVYIHKIDSMYNLRMYSRIGRRNPLHSTAIGKVLLAWRDREEVKEILSQVEFKRTTVHTIGSTEELLPQLDLVRQQGYGEDNEEQEEGLRCIAVPVFDRFGVVIAGLSISFPTIRFSEDNKHEYVAMLHTAARNISDQMGYHDYPF

Annotated regions:
phrase: KLFELGAKALQNVDLIRSADIQMRELSALTRETIHLGALDEDSIVYIHKIDSMYNLRMYSRIGRRNPLHSTAIGKVLLAWRDREEVKEILSQVEFKRTTVHTIGSTEELLPQLDLVRQQGYGEDNEEQEEGLRCIAVPVFDRFGVVIAGLSISFPTIRFSEDNKHEYVAMLHTAARNISDQMG
type: DOMAIN
name: Tscrpt_reg_IclR_C
description: Transcription regulator IclR, C-terminal

phrase: SVLKVFGILQALGEEREIGITELSQRVMMSKSTVYRFLQTMKSLGYVAQ
type: DOMAIN
name: Tscrpt_reg_IclR_N
description: Transcription regulator IclR, N-terminal

phrase: ILQALGEEREIGITELSQRVMMSKSTVYRFLQTMKSLGYVAQEGESEKYSLTLKLFELGAKALQNV
type: DOMAIN
name: ArsR-like_HTH
description: ArsR-like helix-turn-helix domain

phrase: KALQNVDLIRSADIQMRELSALTRETIHLGALDEDSIVYIHKIDSMYNLRMYSRIGRRNPLHSTAIGKVLLAWRDREEVKEILSQVEFKRTTVHTIGSTEELLPQLDLVRQQGYGEDNEEQEEGLRCIAVPVFDRFGVVIAGLSISFPTIRFSEDNKHEYVAMLHTAARNI
type: DOMAIN
name: Tscrpt_reg_IclR_C
description: Transcription regulator IclR, C-terminal

phrase: VSSVLKVFGILQALGEEREIGITELSQRVMMSKSTVYRFLQTMKSLGYVAQEGESEKYSLT
type: DOMAIN
name: Tscrpt_reg_IclR_N
description: Transcription regulator IclR, N-terminal

phrase: VSSVLKVFGILQALGEEREIGITELSQRVMMSKSTVYRFLQTMKSLGYVAQEGESEKYSLTLKLFELGAKALQNVDLIRSADIQMRELS
type: DOMAIN
name: Tscrpt_reg_IclR_N
description: Transcription regulator IclR, N-terminal
Protein sequence:
MQPTLAPAPHPSMQTSAQDHADQVLHDQLLAAHQHLSHPQQARPPPPPPQPPHMQPTTPVARDQNNIDPAISGGAMLAGPQTPQPDLSGQESPKTYGKRPLSTSKRAAQNRAAQRAFRQRKEAHIRDLEGKVKAYETMGEAIKALQAENYQLREYIINLQSRLLDTQGEVPELPGNIDLSQPRGDIPVPAPPTSGTSTSAVPVPPPTAPQQPQPAQNQASAPNDDMNSLNRIAVAGLGMRKPPTEEANYLGNSFQQQARRVRPDDGQPDASELTLPKQEPTHGLPLIS

Annotated regions:
phrase: KRPLSTSKRAAQNRAAQRAFRQRKEAHIRDLEGKVKAYETMGEAIKALQAENYQLREYIINLQSRLL
type: DOMAIN
name: bZIP
description: Basic-leucine zipper domain

phrase: KRAAQNRAAQRAFRQ
type: DOMAIN
name: bZIP
description: Basic-leucine zipper domain

phrase: PLSTSKRAAQNRAAQRAFRQRKEAHIRDLEGKVKAYETMGEAIKALQAENYQLREYIIN
type: DOMAIN
name: bZIP
description: Basic-leucine zipper domain
Protein sequence:
MIKVASITKVEDGSIVTPKGFSAIGTAIGLKKGKKDLGAIVCDVPASCAAVYTTNQIQAAPLQVTKDSITTEGKLQAIIVNSGNANACTGMKGLQDAYEMRALGAEHFGLKEKYVAVASTGVIGVPLPMDIIRKGIVTLIPAKEENGAHSFSEAILTTDLITKETCYEMIIDGKKVMIAGVAKGSGMIHPNMATMLSFITTDARIEHDVLQTALSQITNHTFNQITVDGDTSTNDMVIAMASGLSETKPIDMEHADWETFVFALQKVCEDLAKKIAQDGEGATKLIEVNVLGVQTNEEAKKIAKQIVGSSLVKTAIHGEDPNWGRIISSIGQSEVAINPNTIDITLQSISVLKNSEPQTFSEEEMKERLQEDEIVINVYLHLGKETGSAWGCDLSYEYVKINACYRT

Annotated regions:
Protein sequence:
MPSPVDAPILTADAMRAAEAACAASGTSLATLMERAGAAVADFAWRMAAGNPVLVLCGPGNNGGDGYVAARWLARRGVHVRVAALAEPASELARAARRAWGGPVEVLGDDLAPAPLVIDALFGVGLSRPLRKDLAARLRGLAKRRVLAVDVPSGVEADGVQPWAPALSADVTVALGALKPAHVLLPAAATCGKVVLAPIGIEAQSSLRTLPRYECDSPGAAAHKFSRGMALVRAGPMRGAAGLAASAVLRAGAGYAILSGASGAPLSAIIAEDGDHFAERLADERLGAVVIGPGYPASDALDRDVAAALKSGRALVLDAAAIVSALPRLGGAPAILTPHAGEFARAFPGLEGSKIDRARAAASKSGAVVIYKGADTIVAAPDGRIAAAWPGCPWLATAGTGDVLAGACAAMLARGDEAFDAAVAAVSWHISRARAIGPGLVADDLVRA

Annotated regions:
phrase: LTADAMRAAEAACAASGTSLATLMERAGAAVADFAWRMAAGNPVLVLCGPGNNGGDGYVAARWLARRGVHVRVAALAEPASELARAARRAWGGPVEVLGDDLAPAPLVIDALFGVGLSRPLRKDLAARLRGLAKRRVLAVDVPSGVEADGVQPWAPALSADVTVALGALKPAHVLLPAAATCGKVVLAPIGI
type: DOMAIN
name: YjeF_N_dom
description: YjeF N-terminal domain

phrase: LRTLPRYECDSPGAAAHKFSRGMALVRAGPMRGAAGLAASAVLRAGAGYAILSGASGAPLSAIIAEDGDHFAERLADERLGAVVIGPGYPASDALDRDVAAALKSGRALVLDAAAIVSALPRLGGAPAILTPHAGEFARAFPGLEGSKIDRARAAASKSGAVVIYKGADTIVAAPDGRIAAAWPGCPWLATAGTGDVLAGACAAMLARGDEAFDAAVAAVSWHISRARAIGPGLVADDLVR
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: AAAHKFSRGMALVRAGPMRGAAGLAASAVLRAGAGYAILSGASGAPLSAIIAEDGDHFAERLADERLGAVVIGPGYPASDALDRDVAAALKSGRALVLDAAAIVSALPRLGGAPAILTPHAGEFARAFPGLEGSKIDRARAAASKSGAVVIYKGADTIVAAPDGRIAAAWPGCPWLATAGTGDVLAGACAAMLARGDEAFDAAVAAVSW
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: LTADAMRAAEAACAASGTSLATLMERAGAAVADFAWRMAAGNPVLVLCGPGNNGGDGYVAARWLARRGVHVRVAALAEPASELARAARRAWGGPVEVLGDDLAPAPLVIDALFGVGLSRPLRKDLAARLRGLAKRRVLAVDVPSGVEADGVQPWAPALSADVTVALGALKPAHVLLPAAATCGKVVLAPIGI
type: DOMAIN
name: YjeF_N_dom
description: YjeF N-terminal domain

phrase: TLMERAGAAVADFAWRMAAGNPVLVLCGPGNNGGDGYVAARWLARRGVHVRVAALAEPASELARAARRAWGGPVEVLGDDLAPAPLVIDALFGVGLSRPLRKDLAARLRGLAKRRVLAVDVPSGVEADGVQPWAPALSADVTVALGALK
type: DOMAIN
name: YjeF_N_dom
description: YjeF N-terminal domain

phrase: MRAAEAACAASGTSLATLMERAGAAVADFAWRMAAGNPVLVLCGPGNNGGDGYVAARWLARRGVHVRVAALAEPASELARAARRAWGGPVEVLGDDLAPAPLVIDALFGVGLSRPLRKDLAARLRGLAKRRVLAVDVPSGVEADGVQPWAPALSADVTVALGALKPAHVLLPAAATCGKVVLAPIGIEAQSS
type: DOMAIN
name: YjeF_N_dom
description: YjeF N-terminal domain

phrase: GPMRGAAGLAASAVLRAGAGYAILSGASGAPLSAIIAEDGDHFAERLADERLGAVVIGPGYPASDALDRDVAAALKSGRALVLDAAAIVSALPRLGGAPAILTPHAGEFARAFPGLEGSKIDRARAAASKSGAVVIYKGADTIVAAPDGRIAAAWPGCPWLATAGTGDVLAGACAAMLARGDEAFDAAVAAVSWHISRA
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase
Protein sequence:
MTKKRIAVIGAGASGLTSIKCCLEEGLEPICFERTDDIGGLWRFQVEPEEGRASIYKSVIINTSKEMMCFSDYPIPDHYPNFMHNSKVLEYFKMYAKEFDLLKYIRFKTTVCSVKKQPDFSTSGQWEVVTEFEGEKEVNIFDGVMVCTGHHTNAHLPLESFPGIEKFKGQYFHSRDYKTPESFTGKRVIIIGIGNSGGDLAVEISHTAKQVFLSTRRGAWILNRVGDYGYPIDVLLSSRFYHFMKNICGQSISNISLERQLNKRFDHEMFGLKPKHRALSQHPTVNDDLPNRIISGLVKVKANVKEFTETAAIFEDGSREDDIDAVIFATGYSFDFPFLEDCVKVVKNKISLYKMVFPPNLEKPTLAIIGLIQPLGAIMPISELQGRWATQVFKGLKTLPSKSEMIREIAKFQENMAKRYVDSQRHTIQGDYIDTMEVPRPVTESDPWSSSNNARSLNPLCQAGDQTCASTVTPDAAVRLFFVVVFYSCFLFESK

Annotated regions:
Protein sequence:
MRLIPLSTAEQVGKWAARHIVNRINAFKPTADRPFVLGLPTGGTPLTAYKALVEMHKAGEVSFKHVVTFNMDEYVGLPKEHPESYHSFMHRNFFDHVDIPAENINLLNGNAPDIDAECRQYEEKIRSYGKIHLFMGGVGNDGHIAFNEPASSLASRTRIKTLTHDTRVANSRFFDGDVNQVPKYALTVGVGTLLDAEEVMILVLGHQKAQALQAAVEGNVNHMWTISCLQLHPKAVVVCDEPSTMELKVKTLKYFNELEAENIKGL

Annotated regions:
phrase: TAEQVGKWAARHIVNRINAFKPTADRPFVLGLPTGGTPLTAYKALVEMHKAGEVSFKHVVTFNMDEYVGLPKEHPESYHSFMHRNFFDHVDIPAENINLLNGNAPDIDAECRQYEEKIRSYGKIHLFMGGVGNDGHIAFNEPASSLASRTRIKTLTHDTRVANSRFFDGDVNQVPKYALTVGVGTLLDAEEVMILVLGHQKAQALQAAVEGNVNHMWTISC
type: DOMAIN
name: Glc/Gal-6P_isomerase
description: Glucosamine/galactosamine-6-phosphate isomerase

phrase: IRSYGKIHLFMGGVGNDG
type: CONSERVED_SITE
name: Glucosamine6P_isomerase_CS
description: Glucosamine-6-phosphate isomerase, conserved site
Protein sequence:
MRIVLGVGGGIAAYKVASLLRLFTEAGHDVTVIPTEAATRFVGVATWEALSGHPVSNSVFDEVHTVNHVRLGHEAELIVVAPATADLLARAATGQANDLLSNTLLMAGSCPVLMAPAMHTEMWQHPATQANVETLRSRGVTVVEPASGRLTGSDSGPGRLPEPDAIFDAALALAGAPAVPATVPLPPSDATLAAPRGPLAGLTVTISAGGTREPLDPVRFLGNRSSGKQGVALAAAAREAGARVRLLAAHMDVMPPAGVDVVKVGTALELRKAALHAAADSDVIIMAAAVADFRPADVAGTKIKKRDDVADPVITLVRNPDILRELVEIRDAASRRQLIVGFAAETGDADGDVLDYAADKLRRKACDLLVVNHVGEDKVFGEDTNSVVILSRSGSERQEASGSKSDVAAAVIDRISAELSRVVPPA

Annotated regions:
phrase: MRIVLGVGGGIAAYKVASLLRLFTEAGHDVTVIPTEAATRFVGVATWEALSGHPVSNSVFDEVHTVNHVRLGHEAELIVVAPATADLLARAATGQANDLLSNTLLMAGSCPVLMAPAMHTEMWQHPATQANVETLRSRGVTVVEPASGRLTGSDSGPGRLPEPDAIFDAA
type: DOMAIN
name: Flavoprotein
description: Flavoprotein

phrase: LAGLTVTISAGGTREPLDPVRFLGNRSSGKQGVALAAAAREAGARVRLLAAHMDVMPPAGVDVVKVGTALELRKAALHAAADSDVIIMAAAVADFRPADVAGTKIKKRDDVADPVITLVRNPDILRELVEIRDAASRRQLIVGFAAETGDADGDVLDYAADKLRRKACDLLVVNHVGEDKVFGEDTNSVVI
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal
Protein sequence:
MRVKGIQRNWPQWWIWGSLGFWMLMFYSVMGNLWVTVYYGVPVWKEAKTTLFCASDAKAYEKEVHNIWATHACVPTDPNPQEIVLENVTENFNMWKNDVVDQMHEDIISLWDQSLKPCVKLTPLCVTLQCSNVSRDATSSSSETSGNGTHDEGMREGMREIKNCSFNVTTELRDKRKNVYALFYKLDIVPLEENDTISNSTYRLINCNTSSISQACPKVSFGPIPIHYCAPAGYAILKCNNKTFNGTGPCQNVSTVQCTHGIKPVVSTQLLLNGSLAEGEIIIRSENMTDNVKPIIVHLNESVEINCTRPNNNTRKSIRIGPGQTFYATGAIIGDIRQAYCTVNASKWNETLQKVKKKLGEHFPDKNITFESPSGGDLEITTHTFNCRGEFFYCNTSNLSNETYLANLTRMSNVTKNATITLPCRIKQIINMWQEVGRAIYAPPIAGKITCISNITGTLLTRDGGVSNTTEGNETFRPGGGDMRNNWRSELYKYKVVEIRPLGVAPTEARRRVVEREKRAVGAIGAVLLGFLGAAGSTMGAASMTLTVQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQTRVLAMERYLKDQQLLGLWGCSGKIICTTNVPWNASWSNKSQEDIWNNMTWMPWDREINNYTRTIYELLEESQSQQEQNEKDLLALDSWKNLWNWFNISNWLWYIKIFIIIVGGLIGLRIIFAVLSIVNRVRQGYSPLSLQTLTPNPRGPDRPRGIEEEGGEQDKDRSIRLVNGFLALAWDD

Annotated regions:
phrase: VQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQTRVLAMERYLKDQQLLGLWGCSGKIICTTNVPWNASWSNKSQEDIWNNMTWMPWDREINNYTRTIYELLEESQSQQEQNEKDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKEAKTTLFCASDAKAYEKEVHNIWATHACVPTDPNPQEIVLENVTENFNMWKNDVVDQMHEDIISLWDQSLKPCVKLTPLCVTLQCSNVSRDATSSSSETSGNGTHDEGMREGMREIKNCSFNVTTELRDKRKNVYALFYKLDIVPLEENDTISNSTYRLINCNTSSISQACPKVSFGPIPIHYCAPAGYAILKCNNKTFNGTGPCQNVSTVQCTHGIKPVVSTQLLLNGSLAEGEIIIRSENMTDNVKPIIVHLNESVEINCTRPNNNTRKSIRIGPGQTFYATGAIIGDIRQAYCTVNASKWNETLQKVKKKLGEHFPDKNITFESPSGGDLEITTHTFNCRGEFFYCNTSNLSNETYLANLTRMSNVTKNATITLPCRIKQIINMWQEVGRAIYAPPIAGKITCISNITGTLLTRDGGVSNTTEGNETFRPGGGDMRNNWRSELYKYKVVEIRPLGVAPTEARRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: MGAASMTLTVQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQTRVLAMERYLKDQQLLGLWGCSGKIICTTNVPWNASWSNKSQEDIWNNMTWMPWDREINNYTRTIYELLEESQSQQEQNEKDLLALDSWKNLWNWFNISNWLWYIKIFIIIVGGLIGLRIIFAVLSIVNRVRQGYSPLSLQT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MSAEPRINDRIRVPEVRLVGPSGEQVGIVPLAKALELAQEYDLDLVEVAANARPPVCKLMDYGKFKYESAMKAREARKNQAHTVIKEMKLRPKIDPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGYRLLQRLAEDVADLGFVESNPKQDGRNMIMVLGPHKKKTEAMAEARQAQEARKADAKANPGKSQNAAETDDAEAEAPAEAPAEA

Annotated regions:
phrase: VIKEMKLRPKIDPHDYDTKKGHVVRFLKQGDKVKITIMFRGREQSRPELGYRLLQRLAEDVADLGFVESNPKQDGRNMIMVLG
type: DOMAIN
name: Translation_initiation_fac_3_C
description: Translation initiation factor 3, C-terminal

phrase: INDRIRVPEVRLVGPSGEQVGIVPLAKALELAQEYDLDLVEVAANARPPVCKLMDYGKFKYESAMKARE
type: DOMAIN
name: Translation_initiation_fac_3_N
description: Translation initiation factor 3, N-terminal
Protein sequence:
MSTESMIRDVELAEEALSKTAGDSQGSRRCLCLSLFSFFLVAGATMLFCLLHFGVIGPQREEFPTGYSIISPLAQTLRSSSKTSSNKPVAHVVANLSAQGQLRWLNTYANTLLANSVKLEDNQLVVPTDGLYLIYSQVLFRGQGCPPTHLFLTHTISRIAVSYQTKVNLLSAIKSPCQRETPEGAEAKPWYEPIYQGGVFQLEKGDRLSAEINLPDYLDFAESGQVYFGIIAL

Annotated regions:
phrase: VAHVVANLSAQGQLRWLNTYANTLLANSVKLEDNQLVVPTDGLYLIYSQVLFRGQGCPPTHLFLTHTISRIAVSYQTKVNLLSAIKSPCQRETPEGAEAKPWYEPIYQGGVFQLEKGDRLSAEINLPDYLDFAESGQVYFGIIA
type: DOMAIN
name: TNF_dom
description: Tumour necrosis factor domain

phrase: LVVPTDGLYLIYSQVL
type: CONSERVED_SITE
name: TNF_CS
description: Tumour necrosis factor, conserved site

phrase: LRWLNTYANTLLANSVKLEDNQLVVPTDGLYLIYSQVLFRGQGCPPTHLFLTHTISRIAVSYQTKVNLLSAIKSPCQRETPEGAEAKPWYEPIYQGGVFQLEKGDRLSAEINLPDYLDFAESGQVYFGIIA
type: DOMAIN
name: TNF_dom
description: Tumour necrosis factor domain

phrase: PVAHVVANLSAQGQLRWLNTYANTLLANSVKLEDNQLVVPTDGLYLIYSQVLFRGQGCPPTHLFLTHTISRIAVSYQTKVNLLSAIKSPCQRETPEGAEAKPWYEPIYQGGVFQLEKGDRLSAEINLPDYLDFAESGQVYFGIIA
type: DOMAIN
name: TNF_dom
description: Tumour necrosis factor domain

phrase: PVAHVVANLSAQGQLRWLNTYANTLLANSVKLEDNQLVVPTDGLYLIYSQVLFRGQGCPPTHLFLTHTISRIAVSYQTKVNLLSAIKSPCQRETPEGAEAKPWYEPIYQGGVFQLEKGDRLSAEINLPDYLDFAESGQVYFGI
type: DOMAIN
name: TNF_dom
description: Tumour necrosis factor domain
Protein sequence:
MPTLLQHAQIDWDDQGRPHSRHYDDVYFAVNEGIEETKHVFLGQTRLAERFANLAPHACTVIGETGFGTGMNFFCAWQLFDQHAHSDARLHFVSVEKYPLDHADMARAVRLWPELAAYTEPLLEQYVAVHPGFQQFTFTGGRVTLTLLIGDVLEQLPQLDAQIDVWFLDGFAPAKNPDMWTPELFAQLARLSHPGTVLGTFTTTGWVRRSLVEAGFAMKKVPGIGKKWEVMSGAYVGPLPGPCAPWYARPAVTQGPREALVIGAGLAGSSSAASLARRGWQVTVLERHEAPAQEASGNPQGVLYLKLSAHGTALSQMILSGFGYTRRQLQRLQRGRDWDACGVLQLAFDSKEAERQGKLAAAFDPGLLHCLARAEAEAIAGVALPGGGLFYPEGGWVHPPALCQQQLQHPGIHLVTHQEVLELRKVDEQWQAWAGDQLLARAPVVVLAGAADVLRFEPCAQLPLKRIRGQITRLPATVSSQALRTVVCAEGYVAPPREGEHTLGASFDFHSEDLAPTVAEHQGNLALLDEISVDLAQRLAVAELDPEQLQGRAAFRCTSPDYLPIVGPIADAQAFAEAYAVLGRDARQVPDVPCPWLGGLYVNSGHGSRGLITAPLSGELVAAWVCGEPLPLPRAVAQACHPNRFGLRRLIRGK

Annotated regions:
phrase: PHSRHYDDVYFAVNEGIEETKHVFLGQTRLAERFANLAPHACTVIGETGFGTGMNFFCAWQLFDQHAHSDARLHFVSVEKYPLDHADMARAVRLWPELAAYTEPLLEQYVAVHPGFQQFTFTGGRVTLTLLIGDVLEQLPQLDAQIDVWFLDGFAPAKNPDMWTPELFAQLARLSHPGTVLGTFTTTGWVRRSLVEAGFAMKKVPGIGKKWEVMSG
type: DOMAIN
name: tRNA_MNMC2
description: tRNA mnm(5)s(2)U biosynthesis bifunctional protein MnmC, N-terminal

phrase: ALVIGAGLAGSSSAASLARRGWQVTVLERHEAPAQEASGNPQGVLYLKLSAHGTALSQMILSGFGYTRRQLQRLQRGRDWDACGVLQLAFDSKEAERQGKLAAAFDPGLLHCLARAEAEAIAGVALPGGGLFYPEGGWVHPPALCQQQLQHPGIHLVTHQEVLELRKVDEQWQAWAGDQLLARAPVVVLAGAADVLRFEPCAQLPLKRIRGQITRLPATVSSQALRTVVCAEGYVAPPREGEHTLGASFDFHSEDLAPTVAEHQGNLALLDEISVDLAQRLAVAELDPEQLQGRAAFRCTSPDYLPIVGPIADAQAFAEAYAVLGRDARQVPDVPCPWLGGLYVNSGHGSRGLITAPLSGELVAA
type: DOMAIN
name: FAD-dep_OxRdtase
description: FAD dependent oxidoreductase

phrase: PELAAYTEPLLEQYVAVHPGFQQFTFTGGRVTLTLLIGDVLEQLPQLDAQIDVWFLDGFAPAKNPDMWTPELFAQLARLSHPGTVLGTFTTTGWVRRSLVEAGFAMKKVPGIGKKWEVMSG
type: DOMAIN
name: MnmC-like_methylTransf
description: MnmC-like methyltransferase

phrase: ALVIGAGLAGSSSAASLARRGWQVTVLERHEAPAQEASGNPQGVLYLKLSAHGTALSQMILSGFGYTRRQLQRLQRGRDWDACGVLQLAFDSKEAERQGKLAAAFDPGLLHCLARAEAEAIAGVALPGGGLFYPEGGWVHPPALCQQQLQHPGIHLVTHQEVLELRKVDEQWQAWAGDQLLARAPVVVLAGAADVLRFEPCAQLPLKRIRGQITRLPATVSSQALRTVVCAEGYVAPPREGEHTLGASFDFHSEDLAPTVAEHQGNLALLDEISVDLAQRLAVAELDPEQLQGRAAFRCTSPDYLPIVGPIADAQAFAEAYAVLGRDARQVPDVPCPWLGGLYVNSGHGSRGLITAPLSGELVAAWVCGEPLPLPRAVAQACHPNRFGLRRLIR
type: DOMAIN
name: tRNA_S-uridine_synth_MnmC_C
description: tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC, C-terminal
Protein sequence:
MNQTLLSEFGNPTERVERALDALRHGRGVLVLDDEDRENEGDMIFSAESMTVEQMALTIRHGSGIVCLCLTEERRQQLELPMMVEKNSSHYQTAFTVTIEAAEGVTTGVSAADRLTTIRAAIADNARPSDLNRPGHVFPLRAQPGGVLTRGGHTEATVDLMTLAGLKPSGVLCELTNDDGSMAHAPEVIAFAKQHDMLVLTIEDLVAYRIAAERKAS

Annotated regions:
Protein sequence:
MSDVFNTPHARRTITQALGLTNVSDRTQDWLLPEPWNPPMDPIKNSQEAAEYLQRNQYRMLKPRAIPENTPLDTSELFPHLAEFVGSGAFGTSTLVPAGSTEYIPRYYPTHKPEHNKPTPFGHYDVALLKQMTYQLTNGKDNPEEEGTTFRQFRDTIVEQQYGSGTSQGQLARLVAMKEVATGRNPNKSPKELGLSMEEIATMLEQTLPIGQPGGDEGWPSLTTTLSELLNPAEGMDYLPHITMKSSSGLPFIGKTKGETVTSALAICDTFLREVSECVKEGAMASDNQKLQKLLQDYWYLSCGLLFPKAERYEKKAWLTKTRNIWSAPFPTHLLLSTISWPIMNSSKNNILNVPECVSLYGFNPFSGGMDAVVTNILAQPDETLFLIYADNIYIYMDRTWFSIDLEKGEANATPEHAQAVSYYLLTRGWTQDDGSPAFNATWATIAMMIAPSLVVDSSCLFMNLQLKTYGQGSGNAWTFLINHTLSTILVGKWIEAGQPNPRSKEFMDLEAATGINFKIEREIEGLPTRLQEAMDKAVHTGFLGDGTTNPPEKEGPTVDLDLLGWSATYSRHMDMWVPVLDKERLLSSAAYPKGLENKDLKGKPGAEIAYKIVRNEALLMVGGWNYPLIARSLMANTSAARNNLRQKGVPLDTLTRDWEKMTEFSDIFEDLPIDTKLEVTSEFLQRLNLRGERKQPNVNKHHLRTKGLKKCVSALKQGACRNPTTVAGLKLTAYSKSRINKAKAVFDEINNLPKTESDDWSDRMDDA

Annotated regions:
phrase: MSDVFNTPHARRTITQALGLTNVSDRTQDWLLPEPWNPPMDPIKNSQEAAEYLQRNQYRMLKPRAIPENTPLDTSELFPHLAEFVGSGAFGTSTLVPAGSTEYIPRYYPTHKPEHNKPTPFGHYDVALLKQMTYQLTNGKDNPEEEGTTFRQFRDTIVEQQYGSGTSQGQLARLVAMKEVATGRNPNKSPKELGLSMEEIATMLEQTLPIGQPGGDEGWPSLTTTLSELLNPAEGMDYLPHITMKSSSGLPFIGKTKGETVTSALAICDTFLREVSECVKEGAMASDNQKLQKLLQDYWYLSCGLLFPKAERYEKKAWLTKTRNIWSAPFPTHLLLSTISWPIMNSSKNNILNVPECVSLYGFNPFSGGMDAVVTNILAQPDETLFLIYADNIYIYMDRTWFSIDLEKGEANATPEHAQAVSYYLLTRGWTQDDGSPAFNATWATIAMMIAPSLVVDSSCLFMNLQLKTYGQGSGNAWTFLINHTLSTILVGKWIEAGQPNPRSKEFMDLEAATGINFKIEREI
type: DOMAIN
name: Birnavirus_RdRp_palm
description: Birnavirus RNA-directed RNA polymerase, palm domain

phrase: RKQPNVNKHHLRTKGLKKCVSALKQGACRNPTTVAGLKLTAYSKSRINKAKAVFDEINNLPKTESDDWSDRMD
type: DOMAIN
name: Birnavirus_RdRp_C
description: RNA-directed RNA polymerase, C-terminal, birnavirus

phrase: LPTRLQEAMDKAVHTGFLGDGTTNPPEKEGPTVDLDLLGWSATYSRHMDMWVPVLDKERLLSSAAYPKGLENKDLKGKPGAEIAYKIVRNEALLMVGGWNYPLIARSLMANTSAARNNLRQKGVPLDTLTRDWEKMTEFSDIFEDLPIDTKLEVTSEFLQRLNL
type: DOMAIN
name: Birnavirus_RdRp_thumb
description: RNA-directed RNA polymerase, thumb domain, birnavirus
Protein sequence:
MNAAHLSLAEHAARLRRRELTAVALIDTCAQHHARMEPRLNAYKTWDGARARSAAAAVDTLLDQGQDLGPLMGLPVSVKDLYGVPGLPVFAGSDEALPEAWQAAGPLVARLQRQLGIVVGKTHTVEFAFGGLGVNAHWGTPRNPWSPHEHRVPGGSSAGAGVSLVQGSALLALGTDTAGSVRVPASMTGQVGLKTTVGRWPVEGIVPLSSSLDTAGVLTRTVEDLAYAFAALDTESQGLPAPAPVRVQGLRVGVPTNHFWDDIDPSIAAAVEAAVQRLAQAGAQVVRFPLPHCEEAFDIFRRGGLAASELAAYLDQHFPHKVERLDPVVRDRVRWAEQVSSVEYLRRKAVLQRCGAGAARLFDDVDVLLTPTVPASPPRLADIGTVETYAPANMKAMRNTAISNLFGWCALTMPVGLDANRMPVGLQLMGPPRAEARLIGIALGIEALIGQGHALLGAPDLP

Annotated regions:
phrase: LIDTCAQHHARMEPRLNAYKTWDGARARSAAAAVDTLLDQGQDLGPLMGLPVSVKDLYGVPGLPVFAGSDEALPEAWQAAGPLVARLQRQLGIVVGKTHTVEFAFGGLGVNAHWGTPRNPWSPHEHRVPGGSSAGAGVSLVQGSALLALGTDTAGSVRVPASMTGQVGLKTTVGRWPVEGIVPLSSSLDTAGVLTRTVEDLAYAFAALDTESQGLPAPAPVRVQGLRVGVPTNHFWDDIDPSIAAAVEAAVQRLAQAGAQVVRFPLPHCEEAFDIFRRGGLAASELAAYLDQHFPHKVERLDPVVRDRVRWAEQVSSVEYLRRKAVLQRCGAGAARLFDDVDVLLTPTVPASPPRLADIGTVETYAPANMKAMRNTAISNLFGWCALTMPVGLDANRMPVGLQLMGPPRAEAR
type: DOMAIN
name: Amidase_dom
description: Amidase signature domain
Protein sequence:
MXTQHXQYXXXXXXXXXXXXXXXLVTXACGLYSSYSLNPQLRXCKLPKHIYRLKYDVTVTKFLSDVPVATLPIDFIVPILLKALSGNGFCPVEPRCQQFLDEIIKYTMQDALFLKYYLKNVGAQEDCVDDHFQEKILSSIQGNEFLHQMFFWYDLAILTRRGRLNRGNSRSTWFVHDDLIDILGYGDYVFWKIPISLLPLNTQGIPHAAMDWYQTSVFKEAVQGHTHIVSVSTADVLIMCKDLITCRFNTTLISKIAEVEDPVCSDYPNFKIVSMLYQSGDYLLXILGSDXYKXIXFLEXLXLAKXXXXXXXTERKXXXXTQMXLXVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRNXSXSLKXXXXXXXXXXXXXXXXXXNVQTLCEALLADGLAKAFPSNMMVVTEREQKESLLHQASWHHTSDDFGEHATVRGSSFVTDLEKYNLAFRYEFTAPFIEYCNRCYGVKNVFNWMHYTIPQCYMHVSDYYNPPHNLTLENRNNPPEGPSSYRGHMGGIEGLQQKLWTSISCAQISLVEIKTGFKLRSAVMGDNQCITVLSVFPLETDAGEQEQSAEDN

Annotated regions:
phrase: NVQTLCEALLADGLAKAFPSNMMVVTEREQKESLLHQASWHHTSDDFGEHATVRGSSFVTDLEKYNLAFRYEFTAPFIEYCNRCYGVKNVFNWMHYTIPQCYMHVSDYYNPPHNLTLENRNNPPEGPSSYRGHMGGIEGLQQKLWTSISCAQISLVEIKTGFKLRSAVMGDNQCITVLSVFPLETDAGEQEQSAE
type: DOMAIN
name: Mononeg_RNA_pol_cat
description: Mononegavirales RNA-directed RNA polymerase catalytic domain

phrase: VTXACGLYSSYSLNPQLRXCKLPKHIYRLKYDVTVTKFLSDVPVATLPIDFIVPILLKALSGNGFCPVEPRCQQFLDEIIKYTMQDALFLKYYLKNVGAQEDCVDDHFQEKILSSIQGNEFLHQMFFWYDLAILTRRGRLNRGNSRSTWFVHDDLIDILGYGDYVFWKIPISLLPLNTQGIPHAAMDWYQTSVFKEAVQGHTHIVSVSTADVLIMCKDLITCRFNTTLISKIAEVEDPVCSDYPNFKIVSMLYQSGDYLLXILGSDXYKXIXFLEXLXLAKXXXXXXXTERKX
type: DOMAIN
name: Mononeg_RNA_pol_cat
description: Mononegavirales RNA-directed RNA polymerase catalytic domain

phrase: RGSSFVTDLEKYNLAFRYEFTAPFIEYCNRCYGVKNVFNWMHYTIPQCYMHVSDYYNPPHNLTLENRNNPPEGPSSYRGHMGGIEGLQQKLWTSISCAQISLVEIKTGFKLRSAVMGDNQCITVLSVFPLETDAGEQEQSAED
type: DOMAIN
name: Mononeg_RNA_pol_cat
description: Mononegavirales RNA-directed RNA polymerase catalytic domain
Protein sequence:
MTSLARLKFYATQPHACSYLPDEQATTLFLDPSQPMDVQVYAELSEMGFRRSGDHLYRPHCQRCSACIPARIPVNAPELSRQQKRILKRNADLQVRGVRPAFSEELYALYANYIEKRHADGDMYPPSREQFNTFLVRDLPFSRFYEFRLDGRLLAVAVTDVLPNGLSAVYTFYDPDEERRSLGRYAILWQMGEAARLGLKAVYLGYWIKNCRKMNYKTEYRPIELLVNQRWVTLS

Annotated regions:
phrase: LYALYANYIEKRHADGDMYPPSREQFNTFLVRDLPFSRFYEFRLDGRLLAVAVTDVLPNGLSAVYTFYDPDEERRSLGRYAILWQMGEAARLGLKAVYLGYWIKNCRKMNYKTEYRPIEL
type: DOMAIN
name: N-end_Aminoacyl_Trfase_C
description: N-end rule aminoacyl transferase, C-terminal

phrase: HACSYLPDEQATTLFLDPSQPMDVQVYAELSEMGFRRSGDHLYRPHCQRCSACIPARIPVNAPELSRQQK
type: DOMAIN
name: N-end_Aminoacyl_Trfase_N
description: N-end aminoacyl transferase, N-terminal
Protein sequence:
MKVVHTVGKRRTAIARATAKEGSGKIRINKKPLELMEPKYIKMKLMEPVILAGEALSNIDVDIDVKGGGIVSQMDATRTALGKAIVEFTGKMDLKEKFLSYDRTLLVSDARRTEPHKPSKSSKGPRAKRQKSYR

Annotated regions:
phrase: GGGIVSQMDATRTALGKA
type: CONSERVED_SITE
name: Ribosomal_uS9_CS
description: Small ribosomal subunit protein uS9, conserved site
Protein sequence:
MHEMSLCEGVIEIIEREAQQQNFAKVRTVWLEIGALSHVEPEAMRFCFSAVSHDTIAADARFEIVSVPGAAWCMACAKTVPLKQRYEPCPDCGGHQLQVTAGDELRVKELEVD

Annotated regions:
phrase: GALSHVEPEAMRFCFSAVSHDTIAADARFEIVSVPGAAWCMA
type: CONSERVED_SITE
name: Hydgase_Ni_incorp_HypA/HybF_CS
description: Hydrogenase nickel incorporation protein HypA/HybF, conserved site