nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MKDLLKIFKSQIKTDEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQSKVRRERMGHIELATPIAHIWFLKSLPSRIGLLLDMPLRDIERVLYFESYVIVNEGLTNLEKNQILSEEQYLNALEKFGDEFDAKMGAEAIKLLLNSINLKQECNKLRDELNNSNSETKRKKLTKRIKLLESFIHSNNKPEWMILTVLPILPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELSAPDIIVRNEKRMLQEAIDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIYGKLEKKGLATTIKAAKKMVEREESIVWDILDEVIHEHPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTKEAQYEARSLMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRKKINAKGEGMIFKNSKEAEKSYQMGFSELHAEVQVRITEYKKIDKQNFLKNTKIENTTIGRAILWMIVPKGLPFFMVNKILGKKSISKLLNTCYRILGLKSTVNFADQIMYTGFNYAARSGSSVGIDDMEIPKKKSDIISEAEIEVSEIQEQFQSGLVTAGERYNKVIDIWAAANERVSKAMMKNLSTESTTNKQGNEEKQISFNSIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLN

Annotated regions:
phrase: EFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQSKVRRERMGHIELATPIAHIWFLKSLPSRIGLLLDMPLRDIERVLYFESYVIVNEGLTNLEKNQILSEEQYLNALEKFGDEFDAKMGAEAIKLLLNSINLKQECNKLRDELNNSNSETKRKKLTKRIKLLESFIHSNNKPEWMILTVLPILPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELSAPDIIVRNEKRMLQEAIDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQN
type: DOMAIN
name: RNA_pol_Rpb1_1
description: RNA polymerase Rpb1, domain 1

phrase: EWMILTVLPILPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELSAPDIIVRNEKRMLQEAIDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIYGKLEKKGLATTIKAAKKMVEREESIVWDILDEVIHEHPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTKEAQYEARSLMMSTNNILSPANGEPIIVPSQDVVLGLYYM
type: DOMAIN
name: RNA_pol_N
description: RNA polymerase, N-terminal

phrase: GKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIYGKLEKKGLATTIK
type: DOMAIN
name: RNA_pol_asu
description: RNA polymerase, alpha subunit

phrase: KKGLATTIKAAKKMVEREESIVWDILDEVIHEHPVLLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTKEAQYEARSLM
type: DOMAIN
name: RNA_pol_asu
description: RNA polymerase, alpha subunit

phrase: NILSPANGEPIIVPSQDVVLGLYYMTRKKINAKGEGMIFKNSKEAEKSYQMGFSELHAEVQVRITEYKKIDKQNFLKNTKIENTTIGRAILWMIVPKGLPFFMVNKILGKKSISKLLNTCYRILGLKSTVNFADQIMYTGFNYAARSGSSVGIDD
type: DOMAIN
name: RNA_pol_Rpb1_3
description: RNA polymerase Rpb1, domain 3

phrase: TAGERYNKVIDIWAAANERVSKAMMKNLSTESTTNKQGNEEKQISFNSIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANF
type: DOMAIN
name: RNA_pol_Rpb1_4
description: RNA polymerase Rpb1, domain 4
Protein sequence:
MTHPRLFTGDTLVIATHNKGKVPEIAALLKDHVANFPSAGELGLGEPEETETTYIGNAVLKARAAAIASGLPALADDSGLSVDGLNGDPGVYSARWAGPTKDFTLAMDKVRVALDASTDRKGDRAAFICALALAWPDGHVEAVEGRFEGRLTFPARGARGFGYDPIFIPDGYDITCGEMDPDLKHAISHRADAFAKLKARCFHTG

Annotated regions:
Protein sequence:
MMQDLRLILIIVGAIAIIALLVHGFWTSRKERSSMFRDRPLKRMKSKRDDDSYDDDVEEEEGVGEVRVHRVNHAPGNAQEHDAPRQSPQHQYQPPYASAQPRQPAQQPPEAPAQPQQRPQYGQPSQPQPAQQPAQPVQQPVQQQPVAPQVQSAPQQPVQPAPQQPAPQPAPQTFQPAEPVAEPAPAPEPVVEEAPVAEKPQRKEAVIIMNVAAHHGSELSGEVLLNSIQQAGFKFGDMNIFHRHLSPDGSGPALFSLANMVNPGTFDPEMTGDFSTPGVTIFMQVPSYGDELQNFKLMLQSAQHIADEVGGVVLDDQRRMMTPQKLREYQDRIREVKESNA

Annotated regions:
phrase: EAVIIMNVAAHHGSELSGEVLLNSIQQAGFKFGDMNIFHRHLSPDGSGPALFSLANMVNPGTFDPEMTGDFSTPGVTIFMQVPSYGDELQNFKLMLQSAQHIADEVGGVVLDDQRRMMTPQKLREYQDR
type: DOMAIN
name: ZipA_FtsZ-bd_C
description: ZipA, C-terminal FtsZ-binding domain

phrase: KEAVIIMNVAAHHGSELSGEVLLNSIQQAGFKFGDMNIFHRHLSPDGSGPALFSLANMVNPGTFDPEMTGDFSTPGVTIFMQVPSYGDELQNFKLMLQSAQHIADEVGGVVLDDQRRMMTPQKLREYQDR
type: DOMAIN
name: ZipA_FtsZ-bd_C
description: ZipA, C-terminal FtsZ-binding domain

phrase: VIIMNVAAHHGSELSGEVLLNSIQQAGFKFGDMNIFHRHLSPDGSGPALFSLANMVNPGTFDPEMTGDFSTPGVTIFMQVPSYGDELQNFKLMLQSAQHIADEVGGVVLDDQRRMMTPQKLREYQ
type: DOMAIN
name: ZipA_FtsZ-bd_C
description: ZipA, C-terminal FtsZ-binding domain
Protein sequence:
MLVIKADYKKYPLPVLESMRINEDEFYGKYDACIIVQTCNRIEAYFDEEINDIEKIIPDFKGFDVIKGKKATLHFLNVACGMDSMILGENQILGQIKSSYHKSKELKKTSKYLENLFLKAIHVGQRVRAETKINEGGVSIGSAAVELAEMKLGLKNRNVLLIGAGEIGTLVAKALIEKHIKAVIVANRTYERAETLAKELKGMAVHFDKLKEAINFSDVIICATSSPHYILEKSDLLDVGNKIIIDIANPRDVDDSVRELENISLYTIDDLRNISDKNLQKRLKEVPIVENIIEEEYGILLKQIEKTNVEEVIKDFNTYIEDVRKKELEKAVRLCKNKSPDEIMENFSKAFVKRITHDFVSYSLSVSKEDLLNSIWWKK

Annotated regions:
phrase: ELAEMKLGLKNRNVLLIGAGEIGTLVAKALIEKHIKAVIVANRTYERAETLAKELKGMAVHFDKLKEAINFSDVIICATSSPHYILEKSDLLDVGNKIIIDIANPRDVDDSVRELENISLYTIDDLRN
type: DOMAIN
name: Shikm_DH/Glu-tRNA_Rdtase
description: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase

phrase: VENIIEEEYGILLKQIEKTNVEEVIKDFNTYIEDVRKKELEKAVRLCKNKSPDEIMENFSKAFVKRITHDFV
type: DOMAIN
name: 4pyrrol_synth_GluRdtase_dimer
description: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain

phrase: DYKKYPLPVLESMRINEDEFYGKYDACIIVQTCNRIEAYFDEEINDIEKIIPDFKGFDVIKGKKATLHFLNVACGMDSMILGENQILGQIKSSYHKSKELKKTSKYLENLFLKAIHVGQRVRAE
type: DOMAIN
name: 4pyrrol_synth_GluRdtase_N
description: Glutamyl-tRNA reductase, N-terminal

phrase: HFLNVACGMDSMILGENQILGQI
type: CONSERVED_SITE
name: GluRdtase_CS
description: Glutamyl-tRNA reductase, conserved site
Protein sequence:
MGGKGSKSMSGWHTVRERMRRTQPEPAADGVGAASRDLEKYGAITSSNTANNNADCAWLEAQQEEEEVGFPVRPQVPLRPMTYKAAVDLSHFLKEKGGLEGLVHSQKRQDILDLWIYNTQGYFPDWQNYTPGPGTRFPLTFGWCFKLVPVEPGEVEKANEGENNSLLHPMSQHGMDDPEKEVLKWKFDSRLAFHHMARELHPEYFKDC

Annotated regions:
Protein sequence:
MEKFIRVTGAAAPLLRSNIDTEVVIRINRLIGHRRGELGPFAFEAWRYHPDGSENPDFALNQSKYRAAKILVTGENFGCGSSREAAAWALIDFGFRCVIAPSFGDIFAMNCFQNGVLCIPLCKETVEQIAAELESVADPQVTVDLETQTITTPAGTLVGFDIDHELRQALLEGLDEISLTLKLVDKIDAFRRKDRLDHPWIYRSEETEHMYRVLILAGDGIGAEVLAEVRRVAEWFRDQRGIRIDLREELFGLSAWQRHGTLMRDETWQEILASDAILFGAIGSPDYDKIPAEARKVDQLLRMRRELDLFTNLRPVRTFEALADTSTLRPEVIEGCDMMIVRELCGGIYFGTPRGIESLPDGSERAVNTTVYTTAEIQRIARSAFELARVRQGRLCSVDKANVLVETGGLWRKVVQELHDREYPDIELSHMYVDNCAMQIVRNPKQFDVLVTENLFGDIISDCAAMVAGSLGMLPSASIGPVRSDGRQQALYEPIHGSAPDIAGRGIANPLGAILSFALCLRYSLKQPQEAERLERAVEGAIVKGARTLDIAAVDKTPISTREMGDAVCAELALGF

Annotated regions:
phrase: NLFGDIISDCAAMVAGSLG
type: CONSERVED_SITE
name: IsoCit/isopropylmalate_DH_CS
description: Isocitrate/isopropylmalate dehydrogenase, conserved site

phrase: VLILAGDGIGAEVLAEVRRVAEWFRDQRGIRIDLREELFGLSAWQRHGTLMRDETWQEILASDAILFGAIGSPDYDKIPAEARKVDQLLRMRRELDLFTNLRPVRTFEALADTSTLRPEVIEGCDMMIVRELCGGIYFGTPRGIESLPDGSERAVNTTVYTTAEIQRIARSAFELARVRQGRLCSVDKANVLVETGGLWRKVVQELHDREYPDIELSHMYVDNCAMQIVRNPKQFDVLVTENLFGDIISDCAAMVAGSLGMLPSASIGPVRSDGRQQALYEPIHGSAPDIAGRGIANPLGAILSFALCLRYSLKQPQEAERLERAVEGAIVKGARTLDIAAVDKTPISTREMGDA
type: DOMAIN
name: IsoPropMal-DH-like_dom
description: Isopropylmalate dehydrogenase-like domain

phrase: MEKFIRVTGAAAPLLRSNIDTEVVIRINRLIGHRRGELGPFAFEAWRYHPDGSENPDFALNQSKYRAAKILVTGENFGCGSSREAAAWALIDFGFRCVIAPSFGDIFAMNCFQNGVLCIP
type: DOMAIN
name: AconitaseA/IPMdHydase_ssu_swvl
description: Aconitase A/isopropylmalate dehydratase small subunit, swivel domain

phrase: RVLILAGDGIGAEVLAEVRRVAEWFRDQRGIRIDLREELFGLSAWQRHGTLMRDETWQEILASDAILFGAIGSPDYDKIPAEARKVDQLLRMRRELDLFTNLRPVRTFEALADTSTLRPEVIEGCDMMIVRELCGGIYFGTPRGIESLPDGSERAVNTTVYTTAEIQRIARSAFELARVRQGRLCSVDKANVLVETGGLWRKVVQELHDREYPDIELSHMYVDNCAMQIVRNPKQFDVLVTENLFGDIISDCAAMVAGSLGMLPSASIGPVRSDGRQQALYEPIHGSAPDIAGRGIANPLGAILSFALCLRYSLKQPQEAERLERAVEGAIVKGARTLDIAAVDKTPISTREMGDA
type: DOMAIN
name: IsoPropMal-DH-like_dom
description: Isopropylmalate dehydrogenase-like domain

phrase: AKILVTGENFGCGSSREAAAWALIDFGFRCVIAPSFGDIFAMNCFQNGVLCIPLCKETVEQIAAELESVADPQVTVD
type: DOMAIN
name: IPMI_Swivel
description: 3-isopropylmalate dehydratase, swivel domain
Protein sequence:
MIGDYERFKQLKKKVAEALNISEEELDRMIDKKIEENGGIILKDAALMMIAKEHGVYGEEKNDEEFLISDIEEGQIGVEITGVITDISEIKTFKRRDGSLGKYKRITIADKSGTIRMTLWDDLAELDVKVGDVIKIERARARKWRNNLELSSTSETKIKKLENYEGELPEIKDTYNIGELSPGMTATFEGEVISALPIKEFKRADGSIGKLKSFIVRDETGSIRVTLWDNLTDIDVGRGDYVRVRGYIREGYYGGLECTANYVEILKKGEKIESEEVNIEDLTKYEDGELVSVKGRVIAISNKKSVDLDGEIAKVQDIILDNGTGRVRVSFWRGKTALLENIKEGDLVRITNCRVKTFYDREGNKRTDLVATLETEVIKDENIEAPEYELKYCKIEDIYNRDVDWNDINLIAQVVEDYGVNEIEFEDKVRKVRNLLLEDGTGRIRLSLWDDLAEIEIKEGDIVEILHAYAKERGDYIDLVIGKYGRIIINPEGVEIKTNRKFIADIEDGETVEVRGAVVKILSDTLFLYLCPNCRKRVVEIDGIYNCPICGDVEPEEILRLNFVVDDGTGTLLCRAYDRRVEKMLKMNREELKNLTIEMVEDEILGEEFVLYGNVRVENDELIMVVRRVNDVDVEKEIRILEEME

Annotated regions:
phrase: EVRGAVVKILSDTLFLYLCPNCRKRVVEIDGIYNCPICGDVEPEEILRLNFVVDDGTGTLLCRAYDRRVEKMLKMNREELKNLT
type: DOMAIN
name: Rep_factor-A_C
description: Replication factor A, C-terminal

phrase: KRADGSIGKLKSFIVRDETGSIRVTLWDNLTDIDVGRGDYVRVRGYIREGYYGGLECTANYVEI
type: DOMAIN
name: NA-bd_OB_tRNA
description: OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
Protein sequence:
MKNLRQLSLADIELLMKEWGEPKFRAGQVYDWVWKKFAGSVDEMTNLSKGLREKLSQNFHIPKVSIHHSQFSSDGTIKNRLMLHDGNYVESVLIPTEKRITVCVSSQVGCSLSCKFCATGFLPRKRNLDFDEIVDEVTLANDQALKHYGKGITNIVFMGMGEPLLNYKNVLKAIDTISSPDSLGMSPRRITVSTAGIAKMIRQLGDDEVRFKLALSLHAPNDRKRDTIMPINESNTLEELIDSLNYFYKKTRNEITFEYILFKDVNDSIKDADELVKIYRQVPADLVNIIEYNTIEKADFTKPDDDVVENFMNYLESKKVNARLRRSRGKDIDAACGQLANVDHPTA

Annotated regions:
phrase: TEKRITVCVSSQVGCSLSCKFCATGFLPRKRNLDFDEIVDEVTLANDQALKHYGKGITNIVFMGMGEPLLNYKNVLKAIDTISSPDSLGMSPRRITVSTAGIAKMIRQLGDDEVRFKLALSLHAPNDRKRDTIMPINESNTLEELIDSLNYFYKKTRNEITFEYILFKDVNDSIKDADELVKIYRQVPADLVNIIEYNTIEKADFTKPDDDVVENFMNYLESKKVNARLRRSRGK
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: KNLRQLSLADIELLMKEWGEPKFRAGQVYDWVWKKFAGSVDEMTNLSKGLREKLSQNFHIPKVSIHHSQFSSDGTIKNRLMLHDGNYVESVLIPTEKRITVCVSSQVGCSLSCKFCATGFLPRKRNLDFDEIVDEVTLANDQALKHYGKGITNIVFMGMGEPLLNYKNVLKAIDTISSPDSLGMSPRRITVSTAGIAKMIRQLGDDEVRFKLALSLHAPNDRKRDTIMPINESNTLEELIDSLNYFYKKTRNEITFEYILFKDVNDSIKDADELVKIYRQVPADLVNIIEYNTIEKADFTKPDDDVVENFMNYLESKKVNARLRRSRGKDIDAACGQLA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: NLRQLSLADIELLMKEWGEPKFRAGQVYDWVWKKFAGSVDEMTNLSKGLREKLSQNFH
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: ITVCVSSQVGCSLSCKFCATGFLPRKRNLDFDEIVDEVTLANDQALKHYGKGITNIVFMGMGEPLLNYKNVLKAIDTISSPDSLGMSPRRITVSTAGIAKMIRQLGDDEVRFKLALSLHAPNDRKRDTIMPINESNTLEELIDSLNYFYKKTRNEITFEYILFKDVNDSIKDADELVKIYRQVPADLVNIIEYNTIEKADFTKPDDDVVENFMN
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: SSQVGCSLSCKFCATGFLPRKRNLDFDEIVDEVTLANDQALKHYGKGITNIVFMGMGEPLLNYKNVLKAIDTISSPDSLGMSPRRITVSTAGIAKMIRQLGDDEVRFKLALSLHAPNDRKRDTIMPINESNTLEELIDSLNYFYKKTRNEITFEYILFKDVNDSIKDA
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MIKIIGAGLAGSEAAYYLANKGYKVKLYEMRPKKNTPAHVTKNFAELVCSNSFRSNDPLNAVGLLKVEMTHFNSLILEAANIHKVPAGSSLAVDRNLFSEYVTEKIKSHENIEVIHEEVTSLDPNEYTIIAAGPLASDLLSKQIQDHLHLESLNFFDAVAPIIDAKSINMDIAYLKSRYDKDEAAYINCPMNKQEYLEFYKALMTAESVAPKDFENNVFEGCMPVEDMGKRGIDTLRFGPLKPVGLTKPNGEKPYAVVQLRQDDVNKTMYNMVGFQTHMKWGDQKRVIQMIPGLENAEILRYGVIHKNTYLESPKHLNNAFQVRDIPKWFFAGQISGVEGYIESAASGLNVAINLHNLLTKGEIRPLPVDTMMGAMARYISNYHQYFVPMNANFGLFDQIEAHKTVRKQMYYDRSMHALKEYIEGGI

Annotated regions:
phrase: IKIIGAGLAGSEAAYYLANKGYKVKLYEMRPKKNTPAHVTKNFAELVCSNSFRSNDPLNAVGLLKVEMTHFNSLILEAANIHKVPAGSSLAVDRNLFSEYVTEKIKSHENIEVIHEEVTSLDPNEYTIIAAGPLASDLLSKQIQDHLHLESLNFFDAVAPIIDAKSINMDIAYLKSRYDKDEAAYINCPMNKQEYLEFYKALMTAESVAPKDFENNVFEGCMPVEDMGKRGIDTLRFGPLKPVGLTKPNGEKPYAVVQLRQDDVNKTMYNMVGFQTHMKWGDQKRVIQMIPGLENAEILRYGVIHKNTYLESPKHLNNAFQVRDIPKWFFAGQISGVEGYIESAASGLNVAINLHNL
type: DOMAIN
name: MnmG_N
description: MnmG, N-terminal domain
Protein sequence:
MIWEGAVLLSVVLGIGAVPMDDPEDGGKHWVVIVAGSNGWYNYRHQADACHAYQIVHRNGIPDEQIIVMMYDDIANSEDNPTPGIVINRPNGSDVYAGVLKDYTGEDVTPENFLAVLRGDEEAVKGKGSGKVLKSGPRDHVFVYFTDHGATGILVFPNDDLHVKDLNKTIQYMYKHKMYQKMVFYIEACESGSMMRHLPSDINVYATTAANPTESSYACYYDEKRSTYLGDWYSVNWMEDSDVEDLTKETLHKQYQLVKSHTNTSHVMQYGNKSISSMKVMQFQGMKHKASSPISLPPVKDLDLTPSPEVPLTIMKRKLMSTNDLQESRNLVEKIHRHLDARHVIEKSVQKIVSLIARSGAEAEGLLSERAELTAHDCYQAAVSHFRTHCFNWHSPTYEYALRHLYVLVNLCEKPYPIDRIKLSMDKVCLHYY

Annotated regions:
phrase: KIHRHLDARHVIEKSVQKIVSLIARSGAEAEGLLSERAELTAHDCYQAAVSHFRTHCFNWHSPTYEYALRHLYVLVNLCEKPYPIDRIKLSMDKV
type: DOMAIN
name: Legum_prodom
description: Legumain, prodomain

phrase: EVPLTIMKRKLMSTNDLQESRNLVEKIHRHLDARHVIEKSVQKIVSLIARSGAEAEGLLSERAELTAHDCYQAAVSHFRTHCFNWHSPTYEYALRHLYVLVNLCEKPYPIDRIKLSMDKV
type: DOMAIN
name: Legum_prodom
description: Legumain, prodomain
Protein sequence:
MAGQGSVRLTRKSDNVVIIEKDLATEEMVLSMGPQHPSTHGVLRLECRTDGEVVTEAEPYLGYLHRCFEKYCENVDYPAIVPYTDRMDYLAGMNSEMAYAIAVEKLLDIEIPRRVEFIRVIVSELNRIASHLVAIGTYAIDLGAFTPFLFCFRDREHILNMLEWASGARMLYNYIWIGGLAYDVPADFQKRVGEFVDYFRPKALELSRLLTENEIFVKRTKGIGIMPADVAINYGWSGPMLRGSGVQWDLRRNDPYSIYPELDFAVPVPDGKFSDVGDCLSRHLVRALEIEESLKIIEQCIEKMPSAEGFDPRAAVPKRIRPKAGEVYARAENPRGELGFYILSDGKSTSPVRCKARSSCFVNLSAMKDLSKGQLIPDLVAIIGSIDIVLGEVDR

Annotated regions:
phrase: DLGAFTPFLFCFRDREHILNMLEWASGARMLYNYIWIGGLAYDVPADFQKRVGEFVDYFRPKALELSRLLTENEIFVKRTKGIGIMPADVAINYGWSGPMLRGSGVQWDLRRNDPYSIYPELDFAVPVPDGKFSDVGDCLSRHLVRALEIEESLKIIEQCIEKMPSAEGFDPRAAVPKRIRPKAGEVYARAENPRGELGFYILSDGKSTSPVRCKARSSCFVNLSAMKDLSKGQLIPDLVAIIGSIDIVLGEVD
type: DOMAIN
name: NADH_Q_OxRdtase_suD
description: NADH-quinone oxidoreductase, subunit D
Protein sequence:
MKIKEKVSFSTEDAVRGNGKVNLMGMSASSLADLMEMMGEKRFRATQILKWIHQMGVRDFDQMTNLSKVLRGKLSEGMEIVVPEVVSCENSSDGTRKWLVQVENDSCIEMVFIPEGSRGTLCVSSQIGCALDCSFCATGKQGFNRDLTASEIIGQLWIAADSFNQFSSTTTRRITNVVMMGMGEPLMNFDNVVEAMSIMLDDHAYSLSKRRVTLSTAGVLPALDRLGDVLDVSLAISLHAPNDELRNKLVPLNKKYSINEFIDSARRYLSKMPDSRRKVTVEYTLMDQVNDRASHALELSSVLRELPCKINLIPFNPFPGTEFRRVSDVAMNRFRDILHREGYTVTVRTTRGDDIAAACGQLAGLVNDKTRRQARYKAKLSAQQAVRILS

Annotated regions:
phrase: VNLMGMSASSLADLMEMMGEKRFRATQILKWIHQMGVRDFDQMTNLSKVLRGKLSEGME
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: EGSRGTLCVSSQIGCALDCSFCATGKQGFNRDLTASEIIGQLWIAADSFNQFSSTTTRRITNVVMMGMGEPLMNFDNVVEAMSIMLDDHAYSLSKRRVTLSTAGVLPALDRLGDVLDVSLAISLHAPNDELRNKLVPLNKKYSINEFIDSARRYLSKMPDSRRKVTVEYTLMDQVNDRASHALELSSVLRELPCKINLIPFNPFPGTEFRRVSDVAMNRFRDILHREGYTVTVRTTRGDDI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: NGKVNLMGMSASSLADLMEMMGEKRFRATQILKWIHQMGVRDFDQMTNLSKVLRGKLSEGMEIVVPEVVSCENSSDGTRKWLVQVENDSCIEMVFIPEGSRGTLCVSSQIGCALDCSFCATGKQGFNRDLTASEIIGQLWIAADSFNQFSSTTTRRITNVVMMGMGEPLMNFDNVVEAMSIMLDDHAYSLSKRRVTLSTAGVLPALDRLGDVLDVSLAISLHAPNDELRNKLVPLNKKYSINEFIDSARRYLSKMPDSRRKVTVEYTLMDQVNDRASHALELSSVLRELPCKINLIPFNPFPGTEFRRVSDVAMNRFRDILHREGYTVTVRTTRGDDIAAACGQLAGLVNDKTRRQ
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SQIGCALDCSFCATGKQGFNRDLTASEIIGQLWIAADSFNQFSSTTTRRITNVVMMGMGEPLMNFDNVVEAMSIMLDDHAYSLSKRRVTLSTAGVLPALDRLGDVLDVSLAISLHAPNDELRNKLVPLNKKYSINEFIDSARRYLSKMPDSRRKVTVEYTLMDQVND
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MKQRTILREVSIKGKSLHTGEEVHLTIKPAPDNHGIVFKRTDLYGKPELKPIIELVEDLVRSTTIADGHAKVHTVEHVLSALNGCGVDNVLIEMDASEPPILDGSAKHFVNLIQQAEPVEQEAEREYYVLDEPISVTRGGSSIIALPHNGFRITCTSTDDRGIHTQHLSLDVDPETYVAQIAPARTFTIYEDIEELLKLGKIKGGSLDSAIVIKGDKIVSKEPLRFKDEFVRHKILDIIGDIVLAGMPIKAHIVGVRPGHALNAELSKVLRKKILEKAKGAKAAAKSKKSAVVEAHETTMDIRRVLDTLPHRYPFVMIDKVIEIVSEDELVALKNVTINEPYFQGHYPGRPVMPGVLQVEAMAQAAGVLLLRKLPVEENKIAFFMSVDKVKFRQAVEPGDSIEIRVKLIKIRGNKIATATGECKVGGKTVSSAELMFMLADATD

Annotated regions:
Protein sequence:
MTKRIAITPGEPASIGPDLVIKLAQQAWPVELVVCADPNLLMTRAKMLGLPLQLRPYQPSQPPKPQTAGTLTIAPFTLAEEVECGVLNEANSAYVVETLRYAGEKNMSNEFDAVVTGPVHKGIINQAGIPFSGHTEFFALQANCADVVMMLAAPGLQVALMTTHIPLAYVAKAITRDRLHHIITILHRELVSKFGLGSPKIYVCGLNPHAGEDGHLGREEIDTIIPALNELREQGMDIVGPLPADTLFQPKYLEQADVVLAMYHDQGLPVLKSLGFGKSVNITLGLPYIRTSVDHGTALELAGSGKADCGSFTCALNKAIELASKSK

Annotated regions:
Protein sequence:
MKNYSSLIIGGKKFSSRLMVGTGKYKSSQDMVESLSNSETEIITVAVRRIKNEQSGENLLEKINWEKYWMLPNTAGCVNSDEAVRIAILGRELAKLSGQEENNFVKLEVIPDKKYLLPDPIETLKAAEILIKKGFAVLPYINADPILAKRLEEIGCATVMPLGSPIGSGQGLLNLSNIRIIIENAKVPVIIDAGIGVPSEASQAMEIGADGVLINSAIAQAANPPLMAQAINYSVKAGRQAFLAGRIKKQDFAVASSPEKNISI

Annotated regions:
phrase: IGGKKFSSRLMVGTGKYKSSQDMVESLSNSETEIITVAVRRIKNEQSGENLLEKINWEKYWMLPNTAGCVNSDEAVRIAILGRELAKLSGQEENNFVKLEVIPDKKYLLPDPIETLKAAEILIKKGFAVLPYINADPILAKRLEEIGCATVMPLGSPIGSGQGLLNLSNIRIIIENAKVPVIIDAGIGVPSEASQAMEIGADGVLINSAIAQAANPPLMAQAINYSVKAGRQAFLAGRIKKQDFAVASS
type: DOMAIN
name: Thiazole_synthase_ThiG
description: Thiazole synthase ThiG
Protein sequence:
MSLIDWFAARRKDQFVGKVSQDADEGDGLWVKCSECSQVAYRKDLISNFNVCSNCGHHNRINSDERINIIADKNSFEEFDSLLSPTDPLGFKDRRSYADRIKESQAGTGLRDGVVTGICSVNSMPLALAVMDFRFMGGSMGSVVGEKITRIIERATLENFPILIVCASGGARMQEGMLSLMQMAKISGALKKHKEKNLLYMPLLTHPTTGGVTASFAMLGDLILAEPKALIGFAGRRVIEQTLREKLPDNFQTAEYLLEHGFVDVIVKRKDLKTTLAKILKIHGVKELAEANT

Annotated regions:
phrase: LWVKCSECSQVAYRKDLISNFNVCSNCGHHNRINSDERINIIADKNSFEEFDSLLSPTDPLGFKDRRSYADRIKESQAGTGLRDGVVTGICSVNSMPLALAVMDFRFMGGSMGSVVGEKITRIIERATLENFPILIVCASGGARMQEGMLSLMQMAKISGALKKHKEKNLLYMPLLTHPTTGGVTASFAMLGDLILAEPKALIGFAGRRVIEQTLREKLPDNFQTAEYLLEHGFVDVIVKRKDLKTTLAKILKIHGVKELAEAN
type: DOMAIN
name: COA_CT_N
description: Acetyl-coenzyme A carboxyltransferase, N-terminal

phrase: WVKCSECSQVAYRKDLISNFNVCSN
type: DOMAIN
name: Znf-ACC
description: Acetyl-coA carboxylase zinc finger domain

phrase: DRIKESQAGTGLRDGVVTGICSVNSMPLALAVMDFRFMGGSMGSVVGEKITRIIERATLENFPILIVCASGGARMQEGMLSLMQMAKISGALKKHKEKNLLYMPLLTHPTTGGVTASFAMLGDLILAEPKALIGFAGRRVIEQTLREKLPDNF
type: DOMAIN
name: AcCoA_carboxyl_beta
description: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta
Protein sequence:
MSSLPLRSGEKMESPSISDAVPLHAPEDATADFSQPQSPLHEVDSFPVTESSDDVVVNVSEIPNLSPSDDDFDHERNSGEDRDQDHGENPVETDGVVVPIDELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIVSALKESSFLVVSADEKKVKRLSPLPEIRDPKIFTVLVENLPEDHSNENIREIFGKAGSIKSVSICDPNAVEESEKGGKKENFIRTRLHAFVEYETVEAAEKAAATLNNEQDWRNGLRVKLLEQAAGKFAQRRPARREVDKEKDTTGRVHDQTGGEKNKKTREHQNHRLHHSDNPADDDGGNHQKDKNGNKGRVVGQGRRQNHQGGNGIGHGTASSSSHPNYHPVEVSKRPPGPRMPDGTRGFTMGRGKAIPPPTSTQTSHEV

Annotated regions:
phrase: VLVENLPEDHSNENIREIFGKAGSIKSVSICDPNAVEESEKGGKKENFIRTRLHAFVEYETVEAAEKAAATLNN
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: FTVLVENLPEDHSNENIREIFGKAGSIKSVSICDPNAVEESEKGGKKENFIRTRLHAFVEYETVEAAEKAAATLNNEQDWRNGLRVKLLE
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: VVPIDELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIVSALKESSFLVVSADEKKVKRLSPLPEI
type: DOMAIN
name: La_HTH
description: La-type HTH domain

phrase: FTVLVENLPEDHSNENIREIFGKAGSIKSVSICDPNAVEESEKGGKKENFIRTRLHAFVEYETVEAAEKAAATLNNEQDWRNGLRVKLL
type: DOMAIN
name: La-rel_plant_RRM
description: Plant La-related protein, RNA recognition motif

phrase: IIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIVSALK
type: DOMAIN
name: La_HTH
description: La-type HTH domain

phrase: TVLVENLPEDHSNENIREIFGKAGSIKSVSICDPNAVEESEKGGKKENFIRTRLHAFVEYETVEAAEKAAATLNNEQDWRNGLRV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: DELNQKIIRQVEYYFSDENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIVSALKESSFLVVSADEKKVKR
type: DOMAIN
name: La_HTH
description: La-type HTH domain
Protein sequence:
MTTPLSRIRNFSIIAHIDHGKSTLADRLIQFTGGLTEREMSAQVLDNMDIEKERGITIKAQTVRLSYTAKDGETYQLNLMDTPGHVDFAYEVSRSLAACEGALLVVDAAQGVEAQTLANVYQSIEHDHEIVPVINKIDLPAADVDKVKAEIEDIIGLPADDAVLASAKAGIGIEETLEAIVARIPPPRGDAAAPLVAMLVDSWYDPYLGVVILVRVVDGVLKKGQQIKFMQAGTTHLIDRVGCFTPKRTDLVEIGPGEIGFITAQIKDVAQARVGDTVTDAKKPAAAPLPGFKEVQPVVFCGLFPTDANDFEKLRESIQKLRLNDASFSFEMESSAALGFGFRCGFLGLLHLEIIQERLTREYDLDLITTAPSVVYKLKLSHTKNEAAKEVELHNPADMPDPNRIDEIEEPWIEAVIYVPDEYLGPILKLCQDRRGVQKNLTYVGGRAQITYELPLNEVVFDFYDRLKSISRGYASFDYHQIGHRPGDLVKMSILVNNEPVDALSMIVHRGSAESRGRGMCERLKDLIPRHMFKIPIQAAIGGKVIARETIAALRKDVTAKCYGGDATRKKKLLEKQKEGKKRMREYGNVNIPQEAFIAALRMGDDG

Annotated regions:
phrase: RIRNFSIIAHIDHGKSTLADRLIQFTGGLTEREMSAQVLDNMDIEKERGITIKAQTVRLSYTAKDGETYQLNLMDTPGHVDFAYEVSRSLAACEGALLVVDAAQGVEAQTLANVYQSIEHDHEIVPVINKIDLPAADVDKVKAEIEDIIGLPADDAVLASAKAGIGIEETLEAIVARI
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: QPVVFCGLFPTDANDFEKLRESIQKLRLNDASFSFEMESSAALGFGFRCGFLGLLHLEIIQERLTREYDLDLI
type: DOMAIN
name: EFG_II
description: Elongation Factor G, domain II

phrase: NFSIIAHIDHGKS
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: ERGITIKA
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: NLMDTPGHVD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: RSLAACEGALL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: IVPVINKID
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: EPWIEAVIYVPDEYLGPILKLCQDRRGVQKNLTYVGGRAQITYELPLNEVVFDFYDRLKSISRGYASFDYHQIGHRPG
type: DOMAIN
name: LepA_IV
description: Elongation factor 4, domain IV

phrase: DNMDIEKERGITIKA
type: CONSERVED_SITE
name: G_TR_CS
description: Tr-type G domain, conserved site

phrase: VNNEPVDALSMIVHRGSAESRGRGMCERLKDLIPRHMFKIPIQAAIGGKVIARETIAALRKDVTAKCYGGDATRKKKLLEKQKEGKKRMREYGNVNIPQEAFIAA
type: DOMAIN
name: LepA_CTD
description: GTP-binding protein LepA, C-terminal

phrase: IEEPWIEAVIYVPDEYLGPILKLCQDRRGVQKNLTYVGGRAQITYELPLNEVVFDFYDRLKSISRGYASFDYHQIGHRPGDLVK
type: DOMAIN
name: EFG_V-like
description: Elongation factor EFG, domain V-like

phrase: SRIRNFSIIAHIDHGKSTLADRLIQFTGGLTEREMSAQVLDNMDIEKERGITIKAQTVRLSYTAKDGETYQLNLMDTPGHVDFAYEVSRSLAACEGALLVVDAAQGVEAQTLANVYQSIEHDHEIVPVINKIDLPAADVDKVKAEIEDIIGLPADDAVLASAKAGIGIEETLEAIVARIPPP
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: GVVILVRVVDGVLKKGQQIKFMQAGTTHLIDRVGCFTPKRTDLVEIGPGEIGFITAQIKDVAQARVGDTV
type: DOMAIN
name: EFTu-like_2
description: Translation elongation factor EFTu-like, domain 2

phrase: RNFSIIAHIDHGKSTLADRLIQFTGGLTEREMSAQVLDNMDIEKERGITIKAQTVRLSYTAKDGETYQLNLMDTPGHVDFAYEVSRSLAACEGALLVVDAAQGVEAQTLANVYQSIEHDHEIVPVINKIDLPAADVDKVKAEIEDIIGLPADDAVLASAKAGIGIEETL
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain
Protein sequence:
MSFLIVANWKMNGTRSSFVDFIGKLNNKSNEITSKLVICPPFTSFQSNIELNNNIKIGGQNCHHKEFGSYTGEISAGMLKELGCSYVILGHSERAHETDSEIKLKSETAIESGLHPIICVGENSEDYKNKKTKEVIEYQCKNRLPTQGKYTIAYEPIWAIGTGNVPNNDAIAEVIKSCTGKKHIIYGGSVSSENIENLLSIPNLSGVLIGSASLDFDHFYKIIQQVEKKFSLN

Annotated regions:
phrase: AYEPIWAIGT
type: ACTIVE_SITE
name: Triosephosphate_isomerase_AS
description: Triosephosphate isomerase, active site
Protein sequence:
MTVDFGGAVGTVTDDSREAGEGRLFLLTAQNARFEREALERGSKTICVEELYRSLKLDELDVVGVTGTNGKTTTAAAIYSILLDLDYKAALQGTRGLFINDERVEPKTLTTPPALATFAHMYEAKKRGCEFFVMEVSSHAIEQERIGGIEFSLKIHTNITSDHLDYHGSLEAYRAVKSSFFQDEGKKLINRDEEILKFNPKNAFGYGIENPATYKIMAYTLEGGVSGVLKHFETVLPLETSLHGFFNLYNITAAVAAVHILTDEDLADICDAAENFGGVAGRMEIVSEDPLVIVDFAHTEDGIRQVLDSLKEKEIRVVFGAGGERDATKRPAMGRAAASMAKKVYITSDNPRSEDPAKIIDEISEGVEDSRKMEKIVDRRAAIERALAELEPNEVLLILGKGDESWQEIGGKRVPFDDREVVREILSRR

Annotated regions:
phrase: VTGTNGKTTTAAAIYSILLDLDYKAALQGTRGLFINDERVEPKTLTTPPALATFAHMYEAKKRGCEFFVMEVSSHAIEQERIGGIEFSLKIHTNITSDHLDYHGSLEAYRAVKSSFFQDEGKKLINRDEEILKFNPKNAFGYGIENPATYKIMAYTLEGGVSGVLKHFETVLPLETSLHGFFNLYNITAAVAA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRMEIVSEDPLVIVDFAHTEDGIRQVLDSLKEKEIRVVFGAGGERDATKRPAMGRAAASMAKKVYITSDNPRSEDPAKIIDEISEGVEDSRKMEKIVDRRAAIERALAELEPNEVLLILGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MSVSRLAASGLLLVSLLALALDGKPVEKWSPWLWPPRPRPPIPPLQQQKWLDPPIPQQQKWLDPPIPQQQKWLDPPIPQQQKWLNPPIPQQQKWLDPPIPQQQKWLNPPIPQQQKWLNPPIPQQQKWLNPPIPQQQKWLNPPIPQQQKWLDPPIPQQQKWLDPPIPQQQKWLDPPIPQQQKWLNPPIPQQQKWLDPPIPQQQKWLDPPIPQQQKWLNPPIPQQQKWQRPLQPEVPSLMELHQERQKQGRMMHHDEDPGDAAEGPRRQKKEPGKPEGNGCFGKKIDRINAGFGCPKLPPSGGH

Annotated regions:
Protein sequence:
MTQPIARSIPLQVVSGDTAAPAPLQTGVKQIGGDKINRSPVQFVDAPVLRKPSWIRVRIPSGNAVQNLKAKLRENRLVTVCEEASCPNIHECFSHGTATFMILGEVCTRRCSFCDVAHGRPKPPDASEPASLAATVADMGLKYVVVTSVDRDDLRDGGAQHFVDCISAIRTSSPNTRIEILTPDFRGKGRMDRALEILALSPPDVFNHNIETVPDLYPNVRPGADYQWSLTLLQRFKAQHPSIATKSGIMLGLGETMEQVQATLRDLRAHDVDMITIGQYLQPTPHHHPVMRYWTPEEYKALEDYGNALGFSHVASGPMVRSSYHADRQAAGAGVAA

Annotated regions:
phrase: MILGEVCTRRCSFCDVAHGRPKPPDASEPASLAATVADMGLKYVVVTSVDRDDLRDGGAQHFVDCISAIRTSSPNTRIEILTPDFRGKGRMDRALEILALSPPDVFNHNIETVPDLYPNVRPGADYQWSLTLLQRFKAQHPSIATKSGIMLGLGETMEQVQATLRD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: FSHGTATFMILGEVCTRRCSFCDVAHGRPKPPDASEPASLAATVADMGLKYVVVTSVDRDDLRDGGAQHFVDCISAIRTSSPNTRIEILTPDFRGKGRMDRALEILALSPPDVFNHNIETVPDLYPNVRPGADYQWSLTLLQRFKAQHPSIATKSGIMLGLGETMEQVQATLRDLRAHDVDMITIGQYLQPTPHHHPVMRYWTPEEYKALEDYGNALGF
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VLRKPSWIRVRIPSGNAVQNLKAKLRENRLVTVCEEAS
type: DOMAIN
name: LIAS_N
description: Lipoyl synthase, N-terminal

phrase: TATFMILGEVCTRRCSFCDVAHGRPKPPDASEPASLAATVADMGLKYVVVTSVDRDDLRDGGAQHFVDCISAIRTSSPNTRIEILTPDFRGKGRMDRALEILALSPPDVFNHNIETVPDLYPNVRPGADYQWSLTLLQRFKAQHPSIATKSGIMLGLGETMEQVQATLRDLRAHDVDMITIGQYLQPTPHHHPVMRYWTPEEYKALED
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain
Protein sequence:
MSQKIRSTTVIAVRKDGKIVMAGDGQVTMGETVMKGNARKVRKIYDGKIITGFAGATADAFTLLEKFEIRVKEFSGDLTRAAVELAKDWRTDKMLKNLQALLLVADSKTTLLISGNGDVIEPEEDVLAIGSGGNYAYASALALMQNTNLSAREIAEKSLQIAGKICIYTNGKIITEEI

Annotated regions: