nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MVAIVTLTRQVLLTIALALFAQGAAIPEEAAKRDDNPGFVALDFDVLRKPLNLTEALLREKRDSISLSLINEGPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKSSGTFTPSSSSSYKNLGAAFTIRYGDGSTSQGTWGKDTVTINGVSITGQQIADVTQTSVDQGILGIGYTSNEAVYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTSSQPLTISLASVNLKGSSFSFGDGALLDSGTTLTYFPSDFAAQLADKAGARLVQVARDQYLYFIDCNTDTSGTTVFNFGNGAKITVPNTEYVYQNGDGTCLWGIQPSDDTILGDNFLRHAYYLLYNLDANTISIAQVKYTTDSSISAV

Annotated regions:
phrase: SYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKSSGTFTPSSSSSYKNLGAAFTIRYGDGSTSQGTWGKDTVTINGVSITGQQIADVTQTSVDQGILGIGYTSNEAVYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTSSQPLTISLASVNLKGSSFSFGDGALLDSGTTLTYFPSDFAAQLADKAGARLVQVARDQYLYFIDCNTDTSGTTVFNFGNGAKITVPNTEYVYQNGDGTCLWGIQPSDDTILGDNFLRHAYYLLYNLDANTISIAQ
type: DOMAIN
name: SAP-like
description: Secreted aspartic endopeptidase

phrase: SYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKSSGTFTPSSSSSYKNLGAAFTIRYGDGSTSQGTWGKDTVTINGVSITGQQIADVTQTSVDQGILGIGYTSNEAVYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTSSQPLTISLASVNLKGSSFSFGDGALLDSGTTLTYFPSDFAAQLADKAGARLVQVARDQYLYFIDCNTDTSGTTVFNFGNGAKITVPNTEYVYQNGDGTCLWGIQPSDDTILGDNFLRHAYYLLYNLDANTISIAQ
type: DOMAIN
name: PEPTIDASE_A1
description: Peptidase family A1 domain

phrase: YASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKSSGTFTPSSSSSYKNLGAAFTIRYGDGSTSQGTWGKDTVTINGVSITGQQIADVTQTSVDQGILGIGYTSNEAVYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTSSQPLTISLASVNLKGSSFSFGDGALLDSGTTLTYFPSDFAAQLADKAGARLVQVARDQYLYFIDCNTDTSGTTVFNFGNGAKITVPNTEYVYQNGDGTCLWGIQPSDDTILGDNFLRHAYYLLYNLDANTISI
type: DOMAIN
name: PEPTIDASE_A1
description: Peptidase family A1 domain

phrase: ALLDSGTTLTY
type: ACTIVE_SITE
name: Aspartic_peptidase_AS
description: Aspartic peptidase, active site

phrase: VIIDTGSSDFW
type: ACTIVE_SITE
name: Aspartic_peptidase_AS
description: Aspartic peptidase, active site
Protein sequence:
MQNIRSILFGELLDFLKINDEKPYRAGQIYDWLWKYCVSSFEQMNNLSQNLRELLANNFFIDSAKIISQQISNDKTIKVVFELIDKKIVEGVIIPSENRVTACISSQVGCALGCKFCATGKMGFSRNLTIGEIYDQSFLLSKLSVEKYNIPLTNIVFMGMGEPLLNYKNVIGVISFLTSQKGMGLSSKRITISTSGIPAQIKQIADDNIKVNLALSLHTANPDVRKKLLPVANKYSLDEITKSLKYYTSKLKLKVTFEYLLLSGINDTVDDAKALVAFCSNIASKVNIIEYNEVENLPFQKSSENKTALFLKTVYEKKINVKLRRSRGIDIDAACGQLANKQKKR

Annotated regions:
phrase: SENRVTACISSQVGCALGCKFCATGKMGFSRNLTIGEIYDQSFLLSKLSVEKYNIPLTNIVFMGMGEPLLNYKNVIGVISFLTSQKGMGLSSKRITISTSGIPAQIKQIADDNIKVNLALSLHTANPDVRKKLLPVANKYSLDEITKSLKYYTSKLKLKVTFEYLLLSGINDTVDDAKALVAFCSNIASKVNIIEYNEVENLPFQKSSENKTALFLKTVYEKKINVKLRRSRGI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: GELLDFLKINDEKPYRAGQIYDWLWKYCVSSFEQMNNLSQNLRELLANNFF
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: SSQVGCALGCKFCATGKMGFSRNLTIGEIYDQSFLLSKLSVEKYNIPLTNIVFMGMGEPLLNYKNVIGVISFLTSQKGMGLSSKRITISTSGIPAQIKQIADDNIKVNLALSLHTANPDVRKKLLPVANKYSLDEITKSLKYYTSKLKLKVTFEYLLLSGIN
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MNFHQVLFLLLLIFLVDLSDYGVLADKTNDGYKNATKCNIYQGRWIYDNSSNPLYGTSTCPFIGLDCQKFGRPDKNYLHYRWQPTGCDIPRFNGRDFLTRFKGKKILFVGDSLSNNMWVSLSCMLHAAVPNAKYTFQLNKGLSTFTIPEYGISVNFLKNGFLVDLVSDKTRGLILKLDSISRGNQWLGSDVAIFNTFHWWSHTGRAKTWDYFQTGDKIVKEMNRMEAFKIALTTWSKWIDHNIDPSKTRVFYQGVSPVHLNGGEWGKPGKTCLGETVPVQGPSYPGRPNEGEAIVKSVIGRMAKPVELLDVTAMTEMRKDGHPSIYAGGGDRLNDCSHWCLPGVPDAWNQLLYTALLSH

Annotated regions:
phrase: KCNIYQGRWIYDNSSNPLYGTSTCPFIGLDCQKFGRPDKNYLHYRWQPTGC
type: DOMAIN
name: TBL_N
description: Trichome birefringence-like, N-terminal domain

phrase: IPRFNGRDFLTRFKGKKILFVGDSLSNNMWVSLSCMLHAAVPNAKYTFQLNKGLSTFTIPEYGISVNFLKNGFLVDLVSDKTRGLILKLDSISRGNQWLGSDVAIFNTFHWWSHTGRAKTWDYFQTGDKIVKEMNRMEAFKIALTTWSKWIDHNIDPSKTRVFYQGVSPVHLNGGEWGKPGKTCLGETVPVQGPSYPGRPNEGEAIVKSVIGRMAKPVELLDVTAMTEMRKDGHPSIYAGGGDRLNDCSHWCLPGVPDAWNQLLY
type: DOMAIN
name: TBL_C
description: Trichome birefringence-like, C-terminal domain
Protein sequence:
MQVLVRDNNVDQALKALKKKMQREGIFREMKLRGHYEKPSEKRAREKAEAIRRARKLARKKMQREGLLPMKPKPVVGVR

Annotated regions:
phrase: DQALKALKKKMQ
type: CONSERVED_SITE
name: Ribosomal_bS21_CS
description: Small ribosomal subunit protein bS21, conserved site
Protein sequence:
MRLREPLLGGSAAMPGASLQRACRLLVAVCALHLGVTLVYYLAGRDLSRLPQLVGVPTPLQGGSNGAAAIGQPSRELRSGGARPPPPLGASSEPRPGRDSSRGADSGPRPASNLTALPLPRTTVLPACPEESPLLVGPMLIEFNMPVDLGLVGKLNPKVKVGGRYTPKECVSPHKVAIIIPFRNRQEHLKYWLYYLHPILQRQQLDYGIYVINQAGESMFNRAKLLNVGFREALKDYDYNCFVFSDVDLIPMDDHNSYRCFSQPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLSINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGRCRMIRHSRDKKNEPNPQRFDRIAHTKETMLSDGLNSLTYEVLEIQKYPLYTQITVEIGTPS

Annotated regions:
phrase: CPEESPLLVGPMLIEFNMPVDLGLVGKLNPKVKVGGRYTPKECVSPHKVAIIIPFRNRQEHLKYWLYYLHPILQRQQLDYGIYVINQAGESMFNRAKLLNVGFREALKDYDYNCFVFSDVDLIPMDDHNSYR
type: DOMAIN
name: Galactosyl_T_N
description: Galactosyltransferase, N-terminal

phrase: RHISVAMDKFGFSLPYVQYFGGVSALSKQQFLSINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGRCRMIR
type: DOMAIN
name: Galactosyl_T_C
description: Galactosyltransferase, C-terminal
Protein sequence:
MSVEIDWDNIRGDLSVNQGVKDFLNSRLQEFELPSYVNNLKVTNFDLGTMPPNVILKQMDDPLDEFYSYLLQEGDISKEAAKDKNTDVQLLVELDYKGDMSIELSADLVLNYPSPQFMILPVKLRISDIGMHCLCLLAYLKKQLFISFLCDVSDPLLENDKLQVDPSGPNFMGKRALERISLIRNIKIHTELGQLDQGEGSVLRSVGKLEEFLVDLFRNLIRKEAAWPSWIDLDFTPEDPEDPEEEGRENDLVADSSNDGKDIEMKSGTEETLGAGIQESVQHVSPAVTSIDQESRVNSNTSLEE

Annotated regions:
phrase: MSVEIDWDNIRGDLSVNQGVKDFLNSRLQEFELPSYVNNLKVTNFDLGTMPPNVILKQMDDPLDEFYSYLLQEGDISKEAAKDKNTDVQLLVELDYKGDMSIELSADLVLNYPSPQFMILPVKLRISDIGMHCLCLLAYLKKQLFISFLCDVSDPLLENDKLQVDPSGPNFMGKRALERISLIRNIKIHTELGQLDQGEGSVLRSVGKLEEFLVDLFRNLIRKEAAWPSWIDLDF
type: DOMAIN
name: SMP_LBD
description: Synaptotagmin-like mitochondrial-lipid-binding domain

phrase: IRGDLSVNQGVKDFLNSRLQEFELPSYVNNLKVTNFDLGTMPPNVILKQMDDPLDEFYSYLLQEGDISKEAAKDKNTDVQLLVELDYKGDMSIELSADLVLNYPSPQFMILPVKLRISDIGMH
type: DOMAIN
name: MMM1_dom
description: MMM1 domain
Protein sequence:
MQYQLSPSGDFKTSAPVRSSHGHRRSTESKKSGGHGNPYLSTDKTNLDISVSFLTSQAQKKMRGMSANHGIFDPTEMLTADDPSNYGYQFLNHATFYNNMDIMQAASGDVPPLMSVNPYKQSFDINDASAAMNMAQFAHTLNAIQNSSYSMSHYNQAPMQHFISPNSFHVSYNQRFPHIKKNATHANRMVEIKKINGHRYMEVTDPQAVSAPPEYKRLDGSLMGVSKSCLEASKKRPISAEPLYSRKVFIGGLPIDVSEEQVWATFGAFGKVLIDWPRRPEHNAERAEQELKKGSGSRAVTGYVFLVFTHERSVQELVNACEFYEDKYYLQLSSPTMTDKAVQVRPWRLSDIDYFCNDNSSVDHRRTVFIGGVPRPTRAQDLARCLEGHYGKVSYVGIDIDPELKYPKGAARVTFSTSQAFVRAISGRFVQVNHAENNKRVEIKPYVMEEQYCDECEGRLCKHNYAPYFCGHASCLQYYCEGCWDRMHIGKNEDNKLEDQHYPMVRTGDQTRLLKHLPHRSSGFKPAPVFHPSSQSTTAKILAYGDQSQRQFSATPSYSF

Annotated regions:
phrase: KRVEIKPYVMEEQYCDECEGRLCKHNYAPYFCGHASCLQYYCEGCWDRMHIGKNEDNKLEDQHYPMVR
type: DOMAIN
name: CEBP_ZZ
description: Cytoplasmic polyadenylation element-binding protein, ZZ domain

phrase: TVFIGGVPRPTRAQDLARCLEGHYGKVSYVGIDIDPELKYPKGAARVTFSTSQAFVRAISGRFVQVNHAENNKRVEI
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: KVFIGGLPIDVSEEQVWATFGAFGKVLIDWPRRPEHNAERAEQELKKGSGSRAVTGYVFLVFTHERSVQELVNACEFYEDKYYLQL
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: RTVFIGGVPRPTRAQDLARCLEGHYGKVSYVGIDIDPELKYPKGAARVTFSTSQAFVRAISGRFVQVNHAE
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: RKVFIGGLPIDVSEEQVWATFGAFGKVLIDWPRRPEHNAERAEQELKKGSGSRAVTGYVFLVFTHERSVQELVNACEFYEDKYYLQLSSPTMTDKAVQVRPWR
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: SRKVFIGGLPIDVSEEQVWATFGAFGKVLIDWPRRPEHNAERAEQELKKGSGSRAVTGYVFLVFTHERSVQELVNACEFYEDKYYLQLSSPTMTDKAVQVR
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain
Protein sequence:
MNGPSSRSSHLSQPVVKSVLVYRNGDPFFAGRRVVIHEKKVSSFDVFLKEVTGGVQAPFGAVRNIYTPRTGHRIRKLDQIESGGNYVAGGPEAFKKLNYLDIGEIKKRPMEAVNTEVKPVIHSRINVSARFRKSLHEPCTIFLIANGDLISPASRLLIPKKALNQWDHVLQMVTEKITLRSGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKRLPYSELLFDKSAMRRPYGQKASSLPPMVGSRKSKGSGNYRQSKSTIGSSDNSSPQPLKRKGKKDSNSEKPTKVKQSVKSKTSHQAIPDNGEGIFKAGAERSETRGAAEVQEDEDTQVEVPVDQRPAEIVDEEEDGEKTSKDANQKEDFSAMNGETEDRGGSKAAGTSEQEEGIPDHGEKKSSPSRVNGGTDEENGEELDQVAEELQPTEDEKGKAEGDNSGQDEAGLDAQRPPRPEVTVTSPQENEENEANKASSAVA

Annotated regions:
phrase: CTIFLIANGDLISPASRLLIPKKALNQWDHVLQMVTEKITLRSGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKRLPY
type: DOMAIN
name: Doublecortin_dom
description: Doublecortin domain

phrase: KSVLVYRNGDPFFAGRRVVIHEKKVSSFDVFLKEVTGGVQAPFGAVRNIYTPRTGHRIRKLDQIESGGNYVAGGPEAFKKLNY
type: DOMAIN
name: Doublecortin_dom
description: Doublecortin domain

phrase: SLHEPCTIFLIANGDLISPASRLLIPKKALNQWDHVLQMVTEKITLRSGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFKRLPY
type: DOMAIN
name: Doublecortin_dom
description: Doublecortin domain

phrase: SQPVVKSVLVYRNGDPFFAGRRVVIHEKKVSSFDVFLKEVTGGVQAPFGAVRNIYTPRTGHRIRKLDQIESGGNYVAGGPEAFKKLNY
type: DOMAIN
name: Doublecortin_dom
description: Doublecortin domain

phrase: PCTIFLIANGDLISPASRLLIPKKALNQWDHVLQMVTEKITLRSGAVHRLYTLEGKLVESGAELENGQFYVAVGRDKFK
type: DOMAIN
name: DCDC2_DCX_dom2
description: Doublecortin domain-containing protein 2, doublecortin-like domain 2

phrase: LIPKKALNQWDHVLQMVTEKITLRSGAVHRLYTLEGKLVESGAELENGQFYVAVGRDK
type: DOMAIN
name: Doublecortin_dom
description: Doublecortin domain

phrase: VIHEKKVSSFDVFLKEVTGGVQAPFGAVRNIYTPRTGHRIRKLDQIESGGNYVAGGPEA
type: DOMAIN
name: Doublecortin_dom
description: Doublecortin domain
Protein sequence:
MNSPIDKLERKLGYQFKDAGLINLALTHRSANSKHNERLEFLGDSILSFVIADDLYHRFPKVNEGDMSRMRATLVRGHTLAELGREFDLGDYLKLGPGELKSGGFRRDSILADAVEAIIGAIYLDSDIEKVRSIVLSWYNSRLEAIKPGVSQKDPKTRLQEFLQGRRKPLPVYTVTNIKGEAHNQEFTVECEVAGVDKPVIGKGTSRRKAEQAAAETALEQLTNG

Annotated regions:
phrase: ERLEFLGD
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: LINLALTHRSANSKHNERLEFLGDSILSFVIADDLYHRFPKVNEGDMSRMRATLVRGHTLAELGREFDLGDYLKLGPGELKSGGFRRDSILADAVEAIIGAIYLDSDIEKVRSIVLSWYNSRLEA
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: DPKTRLQEFLQGRRKPLPVYTVTNIKGEAHNQEFTVECEVAGVDKPVIGKGTSRRKAEQAAAETALEQLT
type: DOMAIN
name: dsRBD_dom
description: Double-stranded RNA-binding domain

phrase: IDKLERKLGYQFKDAGLINLALTHRSANSKHNERLEFLGDSILSFVIADDLYHRFPKVNEGDMSRMRATLVRGHTLAELGREFDLGDYLKLGPGELKSGGFRRDSILADAVEAIIGAIYLDS
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: PKTRLQEFLQGRRKPLPVYTVTNIKGEAHNQEFTVECEVAGVDKPVIGKGTSRRKAEQAAAETALEQ
type: DOMAIN
name: dsRBD_dom
description: Double-stranded RNA-binding domain

phrase: AGLINLALTHRSANSKHNERLEFLGDSILSFVIADDLYHRFPKVNEGDMSRMRATLVRGHTLAELGREFDLGDYLKLGPGELKSGGFRRDSILADAVEAIIGAIYLDSDIEKVRSIVLSW
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: PKTRLQEFLQGRRKPLPVYTVTNIKGEAHNQEFTVECEVAGVDKPVIGKGTSRRKAEQAAAETALEQL
type: DOMAIN
name: dsRBD_dom
description: Double-stranded RNA-binding domain

phrase: GLINLALTHRSANSKHNERLEFLGDSILSFVIADDLYHRFPKVNEGDMSRMRATLVRGHTLAELGREFDLGDYLKLGPGELKSGGFRRDSILADAVEAIIGAIYLDSDIEKVRSIVLSWYNSRLEAIK
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain
Protein sequence:
MCNTNMSVSTDGAVSTSQIPASEQETLVRPKPLLLKLLKSVGAQKDTYTMKEVIFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLVVVSQQEPSDSGTSVSENRCHLEGGSNQKDLVQELQEEKPSSSDMVSRPSTSSRRRAVSETEENSDELPGERQRKRHKSDNISLSFDESLALCVIREICCERSSSSESTGTPSNPDLDAGVSEHSGDWLDQDSVSDQFSVEFEVESLDSEDYSLSEEGQELSDEDDEVYRVTVYQAGESDTDSFEEDPEISLADYWKCTSCNEMNPPLPPHCNRCWALRENWLPEDKGKDKGNMSEKAKLGDSMQEDEGFDVPDCKKSTVSDSRESCVEENDDKITQASLSQESEDYSQPSTSNSIIYSSQEDVKEFEREETQDKEESMESSFPLNAIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIVLTYFP

Annotated regions:
phrase: LLKLLKSVGAQKDTYTMKEVIFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVK
type: DOMAIN
name: SWIB_MDM2_domain
description: SWIB/MDM2 domain

phrase: ADYWKCTSCNEMNPPLPPHCNRCWALR
type: DOMAIN
name: Znf_RanBP2
description: Zinc finger, RanBP2-type

phrase: TLVRPKPLLLKLLKSVGAQKDTYTMKEVIFYLGQYIMTKRLYDEKQQHIVYCSNDLLGDLFGVPSFSVKEHRKIYTMIYRNLV
type: DOMAIN
name: SWIB_MDM2_domain
description: SWIB/MDM2 domain

phrase: IEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIVLTYF
type: DOMAIN
name: MDM2_mRING-HC-C2H2C4
description: MDM2, modified RING finger, HC subclass

phrase: WKCTSCNEMNPPLPPHCNR
type: DOMAIN
name: Znf_RanBP2
description: Zinc finger, RanBP2-type

phrase: CVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVC
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: LADYWKCTSCNEMNPPLPPHCNRCWALRE
type: DOMAIN
name: Znf_RanBP2
description: Zinc finger, RanBP2-type
Protein sequence:
MQLTHLNKQNNPTMVDVSDKHITTREAYASGVISMSEQAFESAINHTGKKGPITQTAIIAAIMGSKKTSEIIPMCHPLMINKINVDITPNPAEHSITLGVLVKCEGKTGVEMEALTGVSIGLLTIYDMLKAIDKSMVISDIALQSKSGGKSGDFVREDS

Annotated regions:
phrase: MVDVSDKHITTREAYASGVISMSEQAFESAINHTGKKGPITQTAIIAAIMGSKKTSEIIPMCHPLMINKINVDITPNPAEHSITLGVLVKCEGKTGVEMEALTGVSIGLLTIYDMLKAIDKSMVISDIALQSKSG
type: DOMAIN
name: Mopterin_CF_biosynth-C_dom
description: Molybdopterin cofactor biosynthesis C (MoaC) domain
Protein sequence:
MSKETLILLYGGRSAEREVSVLSAESVMRAINYDKFFVKTYFITQVGQFIKTQEFDEMPSSDEKLMTNQTVDLDKMVRPSDIYDDNAIVFPVLHGPMGEDGSIQGFLEVLRMPYVGTNILSSSVAMDKITTKQVLATVGVPQVAYQTYFEGDDLEHAIKLSLETLSFPIFVKPANMGSSVGISKATDESSLRSAIDLALKYDSRILIEQGVTAREIEVGILGNNDVKTTFPGEVVKDVDFYDYDAKYIDNKITMDIPAKVDEATMEAMRQYASKAFKAIGACGLSRCDFFLTKDGQIFLNELNTMPGFTQWSMYPLLWENMGLTYSDLIEKLVMLAKEMFEKRESHLI

Annotated regions:
phrase: IGACGLSRCDFFLTKDGQIFLNELNTMP
type: CONSERVED_SITE
name: D-Ala_lig_Van_CS
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site

phrase: LILLYGGRSAEREVSVLSAESVMRAINYDKFFVKTYFITQVGQFIKTQEFDEMPSSDEKLMTNQTVDLDKMVRPSDIYDDNAIVFPVLHGPMGEDGSIQGFLEVLRMPYV
type: DOMAIN
name: Dala_Dala_lig_N
description: D-alanine--D-alanine ligase, N-terminal domain

phrase: HGPMGEDGSIQ
type: CONSERVED_SITE
name: D-Ala_lig_Van_CS
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site

phrase: LATVGVPQVAYQTYFEGDDLEHAIKLSLETLSFPIFVKPANMGSSVGISKATDESSLRSAIDLALKYDSRILIEQGVTAREIEVGILGNNDVKTTFPGEVVKDVDFYDYDAKYIDNKITMDIPAKVDEATMEAMRQYASKAFKAIGACGLSRCDFFLTKDGQIFLNELNTMPGFTQWSMYPLLWENMGLTYSDLIEKL
type: DOMAIN
name: Dala_Dala_lig_C
description: D-alanine--D-alanine ligase, C-terminal

phrase: KQVLATVGVPQVAYQTYFEGDDLEHAIKLSLETLSFPIFVKPANMGSSVGISKATDESSLRSAIDLALKYDSRILIEQGVTAREIEVGILGNNDVKTTFPGEVVKDVDFYDYDAKYIDNKITMDIPAKVDEATMEAMRQYASKAFKAIGACGLSRCDFFLTKDGQIFLNELNTMPGFTQWSMYPLLWENMGLTYSDLIEKLV
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold
Protein sequence:
MRVAVVGATGMVGNVMLQVLAERNFPVTELIPVASERSVGNQIEFQGTNYTVVGLQTAVAMQPDIALFSAGGDTSLEWAPKFAAVGTTVIDNSSAWRMDPTKKLVVPEINGDVLTSEDKIIANPNCSTIQLVMALAPLHKEYKMKRVVISTYQSVSGTGVKAVRQLDNEEAGVEGEMAYPHPIGRNALPHCDVFLENGYTKEEMKLVKEPKKILRDDSFAVTATAVRIPTAGGHSESVNVQFEGDFELDKVRELLGKTNGVVVQDDVQNNVYPMPILANNKDEVFVGRIRRDESQPNTLNMWIVADNLRKGAATNTVQIAEYLVAKGLVKPSVIA

Annotated regions:
phrase: RVAVVGATGMVGNVMLQVLAERNFPVTELIPVASERSVGNQIEFQGTNYTVVGLQTAVAMQPDIALFSAGGDTSLEWAPKFAAVGTTVIDNSSAWRMDPTKKLVVPEINGDV
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: LAPLHKEYKMKRVVISTYQSVSGTGVKAVRQLDNEEAGVEGEMAYPHPIGRNALPHCDVFLENGYTKEEMKLVKEPKKILRDDSFAVTATAVRIPTAGGHSESVNVQFEGDFELDKVRELLGKTNGVVVQDDVQNNVYPMPILANNKDEVFVGRIRRDESQPNTLNMWIVADNLR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: RVAVVGATGMVGNVMLQVLAERNFPVTELIPVASERSVGNQIEFQGTNYTVVGLQTAVAMQPDIALFSAGGDTSLEWAPKFAAVGTTVIDNSSAWRMDPTKKLVVPEINGDVLTS
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MARYIGPTCKLARREGADLSLKSPARALDSKCKLEQKPGQHGASRKGKLSDYATQLREKQKVKRIYGLLERQFRNYYKKASTKKGNTGENLLQLLETRLDNVCYRMGFAVTRPAARQLVSHRCVLVNGKSVNLASYQIKAGDAITLSEKAQKQLRVQEALTVAEQHDMTPSWVEVDSKKFSGVFKAVPDRADLPSDINEALIVELYSK

Annotated regions:
phrase: RYIGPTCKLARREGADLSLKSPARALDSKCKLEQKPGQHGASRKGKLSDYATQLREKQKVKRIYGLLERQFRNYYKKASTKKGNTGENLLQLL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: LETRLDNVCYRMGFAVTRPAARQL
type: CONSERVED_SITE
name: Ribosomal_uS4_CS
description: Small ribosomal subunit protein uS4, conserved site

phrase: TRLDNVCYRMGFAVTRPAARQLVSHRCVLVNGKSVNLASYQIKAGDAITLSEKAQKQLRVQEAL
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: RLDNVCYRMGFAVTRPAARQLVSHRCVLVNGKSVNLASYQIKAGDA
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: RYIGPTCKLARREGADLSLKSPARALDSKCKLEQKPGQHGASRKGKLSDYATQLREKQKVKRIYGLLERQFRNYYKKASTKKGNTGENLLQLL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal
Protein sequence:
MARVKRGVTAHAKHKKVLKAAKGFYGRRKNTIRIAKQAVEKSLQYAYRDRKNRKRNFRALWIQRINAATREHGLTYGRFIDGLNKAGIEIDRKVLADMAVHEPQAFAALVAKSKASLEYLKNTTPNAFESAVA

Annotated regions:
phrase: KRNFRALWIQRINAAT
type: CONSERVED_SITE
name: RIBOSOMAL_L20_CS
description: Large ribosomal subunit protein bL20, conserved site
Protein sequence:
MRFVVALTGASGQILGIRLIEKLTELGAEVYAVASRAAKITLKAETDYDEGYVREIATKYYDEDEIAAPFASGSFRHDGMAVVPCSIKTASSIAYGIADNLIARAADVTLKEKRRLVLAIREAPLHSGHLKTLARLAEMGAVIFPPVLSFYTRPKSVDDLIEHTVSRIAEQLGVEVDYRRWG

Annotated regions:
phrase: MRFVVALTGASGQILGIRLIEKLTELGAEVYAVASRAAKITLKAETDYDEGYVREIATKYYDEDEIAAPFASGSFRHDGMAVVPCSIKTASSIAYGIADNLIARAADVTLKEKRRLVLAIREAPLHSGHLKTLARLAEMGAVIFPPVLSFYTRPKSVDDLIEHTVSRI
type: DOMAIN
name: Flavoprotein
description: Flavoprotein
Protein sequence:
MTNHEQVLTDYLAAFIEELVQAGVKEAIISPGSRSTPLALMMAEHPILKIYVDVDERSAGFFALGLAKASKRPVVLLCTSGTAAANYFPAVAEANLSQIPLIVLTADRPHELRNVGAPQAMDQLHLYGSHVKDFTDMALPENSEEMLRYAKWHGSRAVDIAMKTPRGPVHLNFPLREPLVPILEPSPFTATGKKHHHVHIYYTHEVLDDSSIQKMVTECTGKKGVFVVGPIDKKELEQPMVDLAKKLGWPILADPLSGLRSYGALDEVVIDQYDAFLKEAEIMDKLTPEVVIRFGSMPVSKPLKNWLEQLSDIRFYVVDPGAAWKDPIKAVTDMIHCDERFLLDIMQQNMPDDAKDAAWLSRWTSYNKVAREIVLAEMANTTILEEGKIVAELRRLLPEKAGLFIGNSMPIRDVDTYFSQIDKKIKMLANRGANGIDGVVSSALGASVVFQPMFLLIGDLSFYHDMNGLLMAKKYKMNLTIVIVNNDGGGIFSFLPQANEPKYFESLFGTSTELDFRFAAAFYDADYHETQSVDELEEAIDKASYHKGLDIIEVKTNRHENKANHQALWAKIADALKALN

Annotated regions:
phrase: VVSSALGASVVFQPMFLLIGDLSFYHDMNGLLMAKKYKMNLTIVIVNNDGGGIFSFLPQANEPKYFESLFGTSTELDFRFAAAFYDADYHETQSVDELEEAIDKASYHKGLDIIE
type: DOMAIN
name: TPP_enzyme_TPP-bd
description: Thiamine pyrophosphate enzyme, TPP-binding

phrase: AAFIEELVQAGVKEAIISPGSRSTPLALMMAEHPILKIYVDVDERSAGFFALGLAKASKRPVVLLCTSGTAAANYFPAVAEANLSQIPLIVLTADRPHELRNVGAPQAMDQL
type: DOMAIN
name: Thiamin_PyroP_enz_TPP-bd_dom
description: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain

phrase: VLDDSSIQKMVTECTGKKGVFVVGPIDKKELEQPMVDLAKKLGWPILADPLSGLRSYGALDEVVIDQYDAFLKEAEIMDKLTPEVVIRFGSMPVSKPLKNWLEQLSDIRFYVVDPGAAWKDPIKAVTDMIHCDERFLLDIMQQNMPDDAKDAAWLSRWTSYNKVAREIVLAEMANTTILEEGKIVAELRRLLPEKAGLF
type: DOMAIN
name: MenD_middle
description: Menaquinone biosynthesis protein MenD, middle domain
Protein sequence:
MSLKLDGKKLSLEIEERLRNYILTNKTIAKRNPGLAVIRIGEDPASGVYVGNKEKACSRVGIKSYIFHLKDTVEQKEVEQLLNKLNLDNNIDGMLLQLPISKKFDEQRLISFINPEKDVDGLNEQNIGKLVKNEQAMRSCTPAGIVNLLKSQNIKIEGKKIVVIGRSLLVGKPLSLMMLNLNATVTITHSKTINLNKICKEADILIAAAGKPNLINSSFVKEGAVIIDVGIHRLTSSDKSKTRLCGDVLLEDVIPKVFAYTPVPGGVGPMTVTMLLVNTIFSWQKQFGLSSTLNDLLP

Annotated regions:
phrase: LDGKKLSLEIEERLRNYILTNKTIAKRNPGLAVIRIGEDPASGVYVGNKEKACSRVGIKSYIFHLKDTVEQKEVEQLLNKLNLDNNIDGMLLQLPISKKFDEQRLISFINPEKDV
type: DOMAIN
name: THF_DH/CycHdrlase_cat_dom
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain

phrase: EQNIGKLVKNEQAMRSCTPAGIVNLLKSQNIKIEGKKIVVIGRSLLVGKPLSLMMLNLNATVTITHSKTINLNKICKEADILIAAAGKPNLINSSFVKEGAVIIDVGIHRLTSSDKSKTRLCGDVLLEDVIPKVFAYTPVPGGVGPMTVTMLLVNTIFSWQK
type: DOMAIN
name: THF_DH/CycHdrlase_NAD-bd_dom
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain

phrase: PEKDVDGLNEQNIGKLVKNEQAMRSCTPAGIVNLLKSQNIKIEGKKIVVIGRSLLVGKPLSLMMLNLNATVTITHSKTINLNKICKEADILIAAAGKPNLINSSFVKEGAVIIDVGIHRLTSSDKSKTRLCGDVLLEDVIPKVFAYTPVPGGVGPMTVTMLLVNTIFSW
type: DOMAIN
name: THF_DH/CycHdrlase_NAD-bd_dom
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain

phrase: PGGVGPMT
type: CONSERVED_SITE
name: THF_DH/CycHdrlase_CS
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site
Protein sequence:
MNPLHVVILAAGQGSRMKSALPKVLHCVAGHPMLHHVIGTAKQLGAETIHTVIGHGGGKVRETTTEPLVNWVVQEQQLGTGHAVAQALPHLPDDARVLVLYGDVPLTRADTLNAMVEALDDNTLGLLTVTLDNPQGYGRIVRDRAGKVTSIVEQKDASADQLAIREVNTGILAVAARHLKAWLPVLSNANAQGEYYLTDIIAMAVEHNLKVAVSQPEDPFEVQGVNNRLQLAELERWFQKREAERLMTDGATLADPARIDVRGELTIGNDILIDVNVVFEGKVSLGNNVSIGPGCVIRDAIIAEGAQISAHSVIEGATIGANAQVGPFARIRPGTELAANTKVGNFVETKKTLVGEGSKINHLSYVGDATLGRNVNVGAGTITCNYDGVNKFQTVIGDGVFVGSNTSLVAPVSIGAGVTVGAGSTITRDVDENELAVARARQRNIEGWERPKKPN

Annotated regions:
phrase: TVIGDGVFVGSNTSLVAPVSIGAGVTVGAGSTIT
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: VVILAAGQGSRMKSALPKVLHCVAGHPMLHHVIGTAKQLGAETIHTVIGHGGGKVRETTTEPLVNWVVQEQQLGTGHAVAQALPHLPDDARVLVLYGDVPLTRADTLNAMVEALDDN
type: DOMAIN
name: MobA-like_NTP_Trfase
description: MobA-like NTP transferase

phrase: GATLADPARIDVRGELTIGNDILIDVNVVFEGKVSLGNNVSIGPGCVIRDAIIAEGAQISAHSVIEGATIGANAQVGPFARIRPGTELAANTKVGNFVETKKTLVGEGSKINHLSYVGDATLGRNVNVGAGTITCNYDGVNKFQTVIGDGVFVGSNTSLVAPVSIGAGVTVGAGSTITRDVDENELAVARAR
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain

phrase: VGSNTSLVAPVSIGAGVTVGAGSTITRD
type: CONSERVED_SITE
name: Hexapep_transf_CS
description: Hexapeptide transferase, conserved site
Protein sequence:
MQGSRILLIVGGGIAAFKIPELIRMIRREGGSVVPVLTAAGAEFVTPLTLSSLAEAPCHTALFDLTRESEMGHIQLSRAADLVVVAPATADLLARMAAGLAGDLASTLLLATDKPVLAAPAMNVRMWQHPATQRNMDLLESDGVRFVGPDEGDMACGEYGPGRMAEPETILAAIRAAVARDRPLRLPPEAVVSLPQRVLTGRHVIVTSGPTHEPIDSVRYIANRSSGAQGSAIAAALRDLGARVSFVTGPAEVPPPEGVEVIPVETAREMREAVEDALPADAAVMAAAVADWHVVNARQGKIKKDGSGALPDLQFAENPDILAWISRLPQGRPGLVVGFAAETDHVLENATAKRARKGCDWILANDVSPATGIMGGTENAVTLISAEGAESWPRLSKAEVARRLAARLADALNARNNPAEDRT

Annotated regions:
phrase: RILLIVGGGIAAFKIPELIRMIRREGGSVVPVLTAAGAEFVTPLTLSSLAEAPCHTALFDLTRESEMGHIQLSRAADLVVVAPATADLLARMAAGLAGDLASTLLLATDKPVLAAPAMNVRMWQHPATQRNMDLLESDGVRFVGPDEGDMACGEYGPGRMAEPETILAAI
type: DOMAIN
name: Flavoprotein
description: Flavoprotein

phrase: LTGRHVIVTSGPTHEPIDSVRYIANRSSGAQGSAIAAALRDLGARVSFVTGPAEVPPPEGVEVIPVETAREMREAVEDALPADAAVMAAAVADWHVVNARQGKIKKDGSGALPDLQFAENPDILAWISRLPQGRPGLVVGFAAETDHVLENATAKRARKGCDWILANDVSPATGIMGGTENAVTL
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal
Protein sequence:
MNMKKKEKHAIRKKSIGVASVLVGTLIGFGLLSSKEADASENSVTQSDSASNESKSNDSSSVSAAPKTDDTNVSDTKTSSNTNNGETSVAQNPAQQETTQSSSTNATTEETPVTGEATTTTTNQANTPATTQSSNTNAEELVNQTSNETTSNDTNTVSSVNSPQNSTNAENVSTTQDTSTEATPSNNESAPQNTDASNKDVVSQAVNPSTPRMRAFSLAAVAADAPAAGTDITNQLTDVKVTIDSGTTVYPHQAGYVKLNYGFSVPNSAVKGDTFKITVPKELNLNGVTSTAKVPPIMAGDQVLANGVIDSDGNVIYTFTDYVDNKENVTANITMPAYIDPENVTKTGNVTLTTGIGTNTASKTVLIDYEKYGQFHNLSIKGTIDQIDKTNNTYRQTIYVNPSGDNVVLPALTGNLIPNTKSNALIDAKNTDIKVYRVDNANDLSESYYVNPSDFEDVTNQVRISFPNANQYKVEFPTDDDQITTPYIVVVNGHIDPASTGDLALRSTFYGYDSNFIWRSMSWDNEVAFNNGSGSGDGIDKPVVPEQPDEPGEIEPIPEDSDSDPGSDSGSDSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSASDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSESDSDSDSDSDSDSASDSDSGSDSDSSSDSDSDSTSDTGSDNDSDSDSNSDSESGSNNNVVPPNSPKNGTNASNKNEAKDSKEPLPDTGSEDEANTSLIWGLLASLGSLLLFRRKKENKDKK

Annotated regions:
phrase: SKEPLPDTGSEDEANTSLIWGLLASLGSLLLFRRKKEN
type: DOMAIN
name: LPXTG_anchor
description: LPXTG cell wall anchor domain

phrase: LPDTGSEDEANTSLIWGLLASLGSLLLFRRKKENKDK
type: DOMAIN
name: LPXTG_anchor
description: LPXTG cell wall anchor domain

phrase: YPHQAGYVKLNYGFSVPNSAVKGDTFKITVPKELNLNGVTSTAKVPPIMAGDQVLANGVIDSDGNVIYTFTDYVDNKENVTANITMPAYIDPENVTKTG
type: DOMAIN
name: SDR_Ig
description: SDR-like Ig domain

phrase: FHNLSIKGTIDQIDKTNNTYRQTIYVNPSGDNVVLPALTGNLIPNTKSNALIDAKNTDIKVYRVDNANDLSESYYVNPSDFEDVTNQVRISFPNANQYKVEFPTDDDQITTPYIVVVNGHIDPASTGDLALRSTFYGYDSNFIWRSMSWD
type: DOMAIN
name: Adhesin_Fg-bd_dom_2
description: Fibrinogen-binding domain 2

phrase: KKKEKHAIRKKSIGVASVLVGTL
type: DOMAIN
name: YSIRK_signal_dom
description: YSIRK Gram-positive signal peptide

phrase: MKKKEKHAIRKKSIGVASVLVGTLIGF
type: DOMAIN
name: YSIRK_signal_dom
description: YSIRK Gram-positive signal peptide
Protein sequence:
MQINFSKMHGLGNDFMVVDCVTQNVFFSPAAIRRLADRHRGIGFDQLLVVEPPYDPETDFHYRIFNADGSEVEQCGNGARCFARFVWMKGLTNKYQVAVSTKAGKMLLKLENDNQVTVNMGVPEFEPSKIPFRAKQTEKTYIMRVGERTIFCGTVSMGNPHCVTVVDDLELTDVDTLGPLIESHERFPERVNAGFMQVVSRNEVKLRVYERGAGETQACGSGACAAVAVGYLQGLLDENVKVSLPGGDLHISWAGEGKSLYMTGPVAHVFDGQIVL

Annotated regions:
phrase: NADGSEVEQCGNGA
type: ACTIVE_SITE
name: DAP_epimerase_AS
description: Diaminopimelate epimerase, active site