Protein sequence:
MGQGESTPLSLTLDHWKDVKTRAHNLSVEIRKGKWQTFCSSEWPTFEVGWPPEGTFNPSIISAVKRIVFQETGGHPDQVPYIIVWQDLSNSPPPWVPPLAKIAVASGQDNGRKSAGGRPSAPSRLPIYPETDSLFLLSEPPPYPTSPPPPPAPHAARPAPGLMAEGLGSEGPAAGTRSRRPRSPTGDTGPDSTVALPLRAVGPPAEPNGLVPLQYWPFSSADLYNWKSNHPSFSENPTGLTGLLESLMFSHQPTWDDCQQLLQVLFTTEERERILLEARKNVLGVNGAPTQLENLINEAFPLNRPQWDHNTAEGRERLLVYRRTLVAGLKGAARRPTNLAKVREVLQGPTEPPSVFLERLMEAYRRYTPFDPSSEGQKAAVAMSFIGQSAPDIKKKLQRLEGLQDHSLQDLIKEAEKVYHKRETEEEKQEREKKETEERERRRDRRQEKNLTKILAAVVSEKGFRGRQAGNLSNRAMRAPREGRPPLDKDQCAYCKERGHWARECPRKKNARETNVLTLGDQGSRGSDPLPEPRVTLTVEGIPTEFLVDTGAEHSVLTKPMGKMGSKRTVVAGATGSKVYPWTTKRLLKIGQKQVTHSFLVIPECPAPLLGRDLLTKLKAQIQFSTEGPQVTWEDRPAMCLVLNLEEEYRLHEKPVPPSIDPSWLQLFPMVWAEKAGMGLANQVPPVVVELKSDASPVAVRQYPMSKEAREGIRPHIQRFLDLGILVPCQSPWNTPLLPVKKPGTNDYRPVQDLREVNKRVQDIHPTVPNPYNLLSSLPPSHTWYSVLDLKDAFFCLKLHPNSQPLFAFEWRDPEKGNTGQLTWTRLPQGFKNSPTLFDEALHRDLASFRALNPQVVMLQYVDDLLVAAPTYRDCKEGTRRLLQELSKLGYRVSAKKAQLCREEVTYLGYLLKGGKRWLTPARKATVMKIPTPTTPRQVREFLGTAGFCRLWIPGFASLAAPLYPLTREKVPFTWTEAHQEAFGRIKEALLSAPALALPDLTKPFALYVDEKEGVARGVLTQTLGPWRRPVAYLSKKLDPVASGWPTCLKAIAAVALLLKDADKLTLGQNVLVIAPHNLESIVRQPPDRWMTNARMTHYQSLLLNERVSFAPPAILNPATLLPVESDDTPIHICSEILAEETGTRPDLRDQPLPGVPAWYTDGSSFIMDGRRQAGAAIVDNKRTVWASNLPEGTSAQKAELIALTQALRLAEGKSINIYTDSRYAFATAHVHGAIYKQRGLLTSAGKDIKNKEEILALLEAIHLPKRVAIIHCPGHQRGTDPVATGNRKADEAAKQAAQSTRILTETTKNQEHFEPTRGKIKPRELTPDQGREFIQRLHQLTHLGPDKLLQLVGRTSFHIPNLQSVVREITSKCQVCAVTNAVTTYREPGRRQRGDRPGVYWEVDFTEVKPGRYGNRYLLVFIDTFSGWVEAFPTKTETALTVCKKILEEILPRFGIPKVLGSDNGPAFVAQVSQGLATQLGIDWKLHCAYRPQSSGQVERMNRTIKETLTKLALETGGKDWVTLLPLALLRARNTPGQFGLTPYEILHGGPPPVLASGEVVGSNGDFFPVLFTHLKALEVVRTQIWDQIKEAYRPGTVAIPHPFQVGDRVLVRRHRSGSLEPRWKGPYLVLLTTPTAVKVDGIAAWVHASHLKPAPPGAPDESWELEKTDHPLKLRVRRRRNESTA

Annotated regions:
phrase: LDLGILVPCQSPWNTPLLPVKKPGTNDYRPVQDLREVNKRVQDIHPTVPNPYNLLSSLPPSHTWYSVLDLKDAFFCLKLHPNSQPLFAFEWRDPEKGNTGQLTWTRLPQGFKNSPTLFDEALHRDLASFRALNPQVVMLQYVDDLLVAAPTYRDCKEGTRRLLQELSKLGYRVSAKKAQLCREEVTYLGYL
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: HQLTHLGPDKLLQLVGRTSFHIPNLQSVVREITSKCQVC
type: DOMAIN
name: Znf_H2C2_histone_UAS-bd
description: Zinc finger, H2C2-type, histone UAS binding

phrase: ADLYNWKSNHPSFSENPTGLTGLLESLMFSHQPTWDDCQQLLQVLFTTEERERILLEARKNVLGVNGAPTQLENLINEAFPLNRPQWDHNTAEGRERLLVYRRTLVAGLKGAARRPTNLAKVREVLQGPTEPPSVFLERLMEAYRRYTPFDPSSEGQKAAVAMSFIGQSAPDIKKKLQRLEGLQDHSLQDLIKEAEKVYH
type: DOMAIN
name: Gag_P30
description: Core shell protein Gag P30

phrase: FLVDTGAEHSV
type: ACTIVE_SITE
name: Aspartic_peptidase_AS
description: Aspartic peptidase, active site

phrase: CAYCKERGHWARECP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: TEFLVDTGAEHSVLTKPMGKMGSKRTVVAGATGSKVYPWTTKRLLKIGQKQVTHSFLVIPECPAPLLGRD
type: DOMAIN
name: Peptidase_A2_cat
description: Peptidase A2A, retrovirus, catalytic

phrase: QCAYCKERGHWAREC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: VKKPGTNDYRPVQDLREVNKRVQDIHPTVPNPYNLLSSLPPSHTWYSVLDLKDAFFCLKLHPNSQPLFAFEWRDPEKGNTGQLTWTRLPQGFKNSPTLFDEALHRDLASFRALNPQVVMLQYVDDLLVAAPTYRDCKEGTRRLLQELSKLGYRVSAKKAQLCREEVTYLG
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: QCAYCKERGHWARECP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: DRPGVYWEVDFTEVKPGRYGNRYLLVFIDTFSGWVEAFPTKTETALTVCKKILEEILPRFGIPKVLGSDNGPAFVAQVSQGLATQLGIDWKLHCAYR
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: RGDRPGVYWEVDFTEVKPGRYGNRYLLVFIDTFSGWVEAFPTKTETALTVCKKILEEILPRFGIPKVLGSDNGPAFVAQVSQGLATQLGIDWKLHCAYRPQSSGQVERMNRTIKETLTKLALETGGKDWVTLLPLALLRARNTPGQFGLTPYEILHGG
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: HPFQVGDRVLVRRHRSGSLEPRWKGPYLVLLTTPTAVKVDGIAAWVHASHLKPA
type: DOMAIN
name: MLVIN_C
description: Murine leukemia virus integrase, C-terminal

phrase: WTEAHQEAFGRIKEALLSAPALALPDLTKPFALYVDEKEGVARGVLTQTLGPWRRPVAYLSKKLDPVASGWPTCLKAIAAVALLLKDADKLTLGQNV
type: DOMAIN
name: RT_RNaseH_2
description: Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain

phrase: LPGVPAWYTDGSSFIMDGRRQAGAAIVDNKRTVWASNLPEGTSAQKAELIALTQALRLAEGKSINIYTDSRYAFATAHVHGAIYKQRGLLTSAGKDIKNKEEILALLEAIHLPKRVAIIHCPGHQRGTDPVATGNRKADEAAKQAA
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: EPRVTLTVEGIPTEFLVDTGAEHSVLTKPMGKMGSKRTVVAGATGSKVYPWTTKRLLKIGQKQVTHSFLVIPECPAPLLGRDLLTKLKAQ
type: DOMAIN
name: Retropepsins
description: Retropepsins

phrase: WYTDGSSFIMDGRRQAGAAIVDNKRTVWASNLPEGTSAQKAELIALTQALRLAEGKSINIYTDSRYAFATAHVHGAIYKQRGLLTSAGKDIKNKEEILALLEAIHLPKRVAIIHCPGHQRGTDPVATGNRKADEAAKQA
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: GQGESTPLSLTLDHWKDVKTRAHNLSVEIRKGKWQTFCSSEWPTFEVGWPPEGTFNPSIISAVKRIVFQETGGHPDQVPYIIVWQDLSNSPPPWVPPLA
type: DOMAIN
name: G_retro_matrix
description: Gamma-retroviral matrix protein