nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
METREGSLTWSVLKCDLHPWIKEAIKSLGYPTMTPVQASTIPLFSGNKDVVVEAVTGSGKTLAFVIPVLQKLSNRLYNIDEEGENPEPVKKGHMLSIILSPTRELAKQIQTVFDKVLEYIPEDKATIKTQLLVGSLSSVREDIDYFLTNKTHILIATPGRLLDFLSSNYVKTNSVEIAVLDEADKLLDISFERDVIKILKQLPKQRRTGLFSATISSAGDTIFRTGMANPVKIVVKSKNSKNAAPTSLNVSYMHVEPETKISALIALIKDYRFQKCIVYFPTCTSVKHFYSVFQTLVNVEEEDRYKFFSLHGQLSTKPRLKTLQNFSEGDSMLHKHVLLTTDVAARGIDIPDVDLVIQLDPPTDPDVFFHRSGRTGRANKVGQAIVMLNNNSREEDYVNFMEVKGMTMSNMECPNISKIHDKFQKKFRKYMLEDRARHELAIKSYVGFVRYYSKHMASSIFRLQTLDYVGLGKMYGLLRLPKMPESRYIPNEEMPEDGWLGDVIDMDKYEYADKQKEESRKKNLEEDKARKVHDAKKRKELKVKNEAWSSKTDKIETKQERREKMKRKREAIEKQLMDDSSSDEETKVDWKEMVKTNKKKKTPSDSMQGSFDDL

Annotated regions:
phrase: TPVQASTIPLFSGNKDVVVEAVTGSGKTLAFVIPVLQKLSNRLYNIDEEGENPEPVKKGHMLSIILSPTRELAKQIQTVFDKVLEYIPEDKATIKTQLLVGSLSSVREDIDYFLTNKTHILIATPGRLLDFLSSNYVKTNSVEIAVLDEADKLLDISFERDVIKILKQLPKQRRTGLFSATIS
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: DRARHELAIKSYVGFVRYYSKHMASSIFRLQTLDYVGLGKMYGLLRLPK
type: DOMAIN
name: SPB4-like_CTE
description: ATP-dependent rRNA helicase SPB4-like, C-terminal extension

phrase: IPLFSGNKDVVVEAVTGSGKTLAFVIPVLQKLSNRLYNIDEEGENPEPVKKGHMLSIILSPTRELAKQIQTVFDKVLEYIPEDKATIKTQLLVGSLSSVREDIDYFLTNKTHILIATPGRLLDFLSSNYVKTNSVEIAVLDEADKLLDISFERDVIKILKQLPKQRRTGLFSATISSAGDTIFRTGMANPVK
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: VLDEADKL
type: CONSERVED_SITE
name: RNA-helicase_DEAD-box_CS
description: ATP-dependent RNA helicase DEAD-box, conserved site

phrase: KISALIALIKDYRFQKCIVYFPTCTSVKHFYSVFQTLVNVEEEDRYKFFSLHGQLSTKPRLKTLQNFSEGDSMLHKHVLLTTDVAARGIDIPDVDLVIQLDPPTDPDVFFHRSGRTGRA
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: QTLVNVEEEDRYKFFSLHGQLSTKPRLKTLQNFSEGDSMLHKHVLLTTDVAARGIDIPDVDLVIQLDPPTDPDVFFHRSGRTGRA
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: KISALIALIKDYRFQKCIVYFPTCTSVKHFYSVFQTLVNVEEEDRYKFFSLHGQLSTKPRLKTLQNFSEGDSMLHKHVLLTTDVAARGIDIPDVDLVIQLDPPTDPDVFFHRSGRTGRANKVGQAIVMLNNNSREEDYVNFMEVKGMTMSNMECPNISKIHDKFQKKFRKY
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: KFQKKFRKYMLEDRARHELAIKSYVGFVRYYSKHMASSIFRLQTLDYVGLGKMYGLLRLPKMP
type: DOMAIN
name: SPB4-like_CTE
description: ATP-dependent rRNA helicase SPB4-like, C-terminal extension

phrase: YADKQKEESRKKNLEEDKARKVHDAKKRKELKVKNEAWSSKTDKIETKQERREKMKRKREAIEKQLMDDSSSDEETKVDWKEMVKTNKKKKTPSDSMQGSFD
type: DOMAIN
name: CTT_SPB4
description: ATP-dependent rRNA helicase SPB4-like, C-terminal tail

phrase: WSVLKCDLHPWIKEAIKSLGYPTMTPVQ
type: DOMAIN
name: RNA_helicase_DEAD_Q_motif
description: RNA helicase, DEAD-box type, Q motif

phrase: GYPTMTPVQASTIPLFSGNKDVVVEAVTGSGKTLAFVIPVLQKLSNRLYNIDEEGENPEPVKKGHMLSIILSPTRELAKQIQTVFDKVLEYIPEDKATIKTQLLVGSLSSVREDIDYFLTNKTHILIATPGRLLDFLSSNYVKTNSVEIAVLDEADKLLDISFERDVIKILKQLPKQRRTGLFSATISSAGDTIFRTGMANPVKIVVKSKNSKNAAPTSLNV
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain
Protein sequence:
MAQFYSPNRRVTTRKAVPAKNLTVTVASLDPFGQGVARHEGKTVFVTGVLPGEQAEVQLTEEKRQFSHAKLKRLLTPSPQRVEPPCPHFTRCGGCQQQHAEITLQQSSKTAALMRMMTRETGIELSAASLIAGTPYAYRRRARLALYFQAKEQRLLMGYRQSNSHDLVDIKACPVLRPELEALLQPLRDCLSQLSAVKRLGHVELVQAENGPLLVLRHLDPLHPADEQALRDFAQRQGVSVYLAPDAESLTCLHGEEPVYHVAGLTLAFSPRDFIQVNDAVNQQMVAQALAWLDVQSQDRILDLFCGMGNFTLPLAQRAASVVGVEGVTALVEKGRENARRNALSNVTFFHQNLEDDVTQQPWAAQGFDKILLDPARAGAAGVMEQITRLAPKRVVYVSCNATTLARDSKVLLAAGYRLANVAMLDMFPHTGHLESMALFLHDTGMRKAQ

Annotated regions:
phrase: LDMFPHTGHL
type: CONSERVED_SITE
name: MeTrfase_TrmA_CS
description: RNA methyltransferase TrmA, conserved site

phrase: LTVTVASLDPFGQGVARHEGKTVFVTGVLPGEQAEVQLTEEKRQFSHAK
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: DPARAGAAGVMEQITRLAPKRVVYVSCNAT
type: ACTIVE_SITE
name: MeTrfase_TrmA_AS
description: RNA methyltransferase TrmA, active site

phrase: KAVPAKNLTVTVASLDPFGQGVARHEGKTVFVTGVLPGEQAEVQLTEEKRQFSHAKLK
type: DOMAIN
name: TRAM_dom
description: TRAM domain
Protein sequence:
MCVCSLVPSVRLLYSEASPVRVAPTCGQPPHSRAMYNPSLTPGACMDPYMRPPQGPLPHGMLGHRGMPPPEGGSGPSYCSQTNMMSAHHSFPHNQSGTEHMGSGDGSRFSTPRSVLKLSKKRALSISPLSDASVDLQTVIRTSPNSLVAFVNSRCGQNPASSYGHLSVGAMSPSMGYSSSMNYQSRPPGTMYGTPLGHPPAPYHGPPTRLPPHTPRLHAPPKQGLLKTESVLGAVMDGINVKSLEEHSEGDVASPSSTGTQDPLHGLLEGRDDLDKEEKPEPEAIYETNCHWESCSKEFDTQEQLVHHINNEHIHGEKKEFVCHWKECSREQRPFKAQYMLVVHMRRHTGEKPHKCTFEGCNKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHITKKHRGDTGPRQPGSALTPAGQGTDLLVEKEERTREDCKLLAPENTPKSQPSPGGQSSCSSERSPLGSANNNDSGVEMNLNAAGSLEDLTALEDGGGTGAAESNGGAGCGGMGMSAQALNRLENLKIDKLKQIRRQTPPGRGVGNKLPALSASGEMIAICGPSPLLSNRRVLELSTPELGGGGGVGGMAVPCPPNDRRGSGTSSLSSAYTVSRRSSMASPYLSSRRSSEVSQVGTGGHCQSHVGNDVVDPLSPENSRRTGLCQSASGLPGLPTLTPAQQYSLKAKYAAATGGPPPTPLPNMEQSGTPGRRGFLNEYEGQPLP

Annotated regions:
phrase: TNCHWESCSKEFDTQEQLVHHINNE
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: YVCKIPGCTKRYTDPSSLRKHVKTV
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: HKCTFEGCNKAYSRLENLKTHLRS
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: FVCHWKECSREQRPFKAQYMLVVHMRR
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: YVCEHEGCNKAFSNASDRAKHQNRT
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: CEHEGCNKAFSNASDRAKHQNRT
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: TNCHWESCSKEFDTQEQLVHHINNEHIHGEKK
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: KECSREQRPFKAQYMLVVHMRRHTGEK
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: YVCEHEGCNKAFSNASDRAKHQNRTHSNEK
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: YVCKIPGCTKRYTDPSSLRKHVKTVHGPEA
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: HKCTFEGCNKAYSRLENLKTHLRSHTGEK
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: YVCEHEGCNKAFSNASDRAKHQNRT
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: HKCTFEGCNKAYSRLENLKTHLRS
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: YVCKIPGCTKRYTDPSSLRKHVKTV
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: CHWESCSKEFDTQEQLVHHINNE
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: CHWKECSREQRPFKAQYMLVVHMRRHTGE
type: DOMAIN
name: Znf-C2H2_ZIC1-5/GLI1-3-like
description: ZIC1-5/GLI1-3like, C2H2 zinc finger

phrase: CTFEGCNKAYSRLENLKTHLRS
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: CKIPGCTKRYTDPSSLRKHVKTV
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type
Protein sequence:
MSILHSFNKDTICAVATAPGVGGIAVIRVSGADAFRLVSPLFLYRGKAIDLSGAKPRTALYGEIMEADELIDEVILTCFHGPHSFTAEHTVEIACHGSIYIRRRILEALINQGCRLAQPGEFTRRAYLNGRMDLSSAEAVADIIASESKAQHQMAMKQLRGGYSEELNALREELLRLTGLMELELDFPEEDVEFADRTELLALCDQIELKLKKLIDSYRLGNAVKRGIPVAIVGTTNVGKSTLLNTLLGEERAIVSDIHGTTRDTIEDTMHIGGYLFRFVDTAGLRETEDTIESLGIERSRSKIKEADIILAVVDGTRISEANQLDYIKSIWDEREERTLILLVNKSESLAEADRIGLSETLQTKLSTPTKPIFISAREGRGIDELKGELTQIMETSGANEADLIVSNARHHQLLREAFDALRRMRLGFDMGLSTDLLTLDLRHAITSIGEITGREITSDDTLHYIFAHFCIGK

Annotated regions:
phrase: VAIVGTTNVGKSTLLNTLLG
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: IERSRSKIKEADIILAVV
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: KRGIPVAIVGTTNVGKSTLLNTLLGEERAIVSDIHGTTRDTIEDTMHIGGYLFRFVDTAGLRETEDTIESLGIERSRSKIKEADIILAVVDGTRISEANQLDYIKSIWDEREERTLILLVNKSESLAEADRIGLSETLQTKLSTPTKPIFISAREGRGIDELKGELTQIM
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain

phrase: VAIVGTTNVGKSTLLNTLLGEERAIVSDIHGTTRDTIEDTMHIGGYLFRFVDTAGLRETEDTIESLGIERSRSKIKEADIILAVVDGTRISEANQLDYIKSIWDEREERTLILLVN
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: LSSAEAVADIIASESKAQHQMAMKQLRGGYSEELNALREELLRLTGLMELELDFPEEDVEFADRTELLALCDQIELKLKKLIDSYRLGNAVKRGIPVAIVGTTNVGKSTLLNTLLGEERAIVSDIHGTTRDTIEDTMHIGGYLFRFVDTAGLRETEDTIESLGIERSRSKIKEADIILAVVDGTRISEANQLDYIKSIWDEREERTLILLVNKSESLAEADRIGLSETLQTKLSTPTKPIFISAREGRGIDELKGELTQIMETSGANEADLIVSNARHHQLLREAFDALRRMRLGFDMGLSTDLLTLDLRHAITSIGEITGREITSDDTLHYIFAHF
type: DOMAIN
name: MnmE_helical
description: MnmE, helical domain

phrase: DTICAVATAPGVGGIAVIRVSGADAFRLVSPLFLYRGKAIDLSGAKPRTALYGEIMEADELIDEVILTCFHGPHSFTAEHTVEIACHGSIYIRRRILEALINQGCRLAQPGEFTRRAYLN
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal

phrase: GIPVAIVGTTNVGKSTLLNTLLGEERAIVSDIHGTTRDTIEDTMHIGGYLFRFVDTAGLRETEDTIESLGIERSRSKIKEADIILAVVDGTRISEANQLDYIKSIWDEREERTLILLVNKSESLAEADRIGLSETLQTKLSTPTKPIFISAREGRGIDELKGELTQIM
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain

phrase: IPVAIVGTTNVGKSTLLNTLLGEERAIVSDIHGTTRDTIEDTMHIGGYLFRFVDTAGLRETEDTIESLGIERSRSKIKEADIILAVVDGTRISEANQLDYIKSIWDEREERTLILLVNKSESLAEADRIGLSETLQTKLSTPTKPIFISAREGRGIDE
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: TICAVATAPGVGGIAVIRVSGADAFRLVSPLFLYRGKAIDLSGAKPRTALYGEIMEADELIDEVILTCFHGPHSFTAEHTVEIACHGSIYIRRRILEALINQGCRLAQPGEFTRRAYLNG
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal
Protein sequence:
MSVISIVPLASKPCLYKSFISSTHEPKALRRPISTVGLCRRAKSVTASMSMSSSTALSDDGVQRRIGNHHSNLWDDNFIQSLSSPYGASSYAERAERLIGEVKEIFNRISMANGELVSHVDDLLQHLSMVDNVERLGIDRHFQTEIKVSLDYVYSYWSEKGIGPGRDIVCADLNTTALGFRLLRLHGYTMFPDVFEQFKDQMGRIACSTNQTERQISSILNLFRASLIAFPWEKVMEEAEIFSTAYLKEALQTIPVSSLSREIQYVLDYRWHSDLPRLETRTYIDILRENATNETLDMKTEKLLELAKVEFNIFNSLQQNELKCVSRWWKESGSPDLTFIRHRQVEFYTLVSGIDMEPKRSTFRINFVKICHFVTILDDMYDTFGTIDELRLFTAAVKRWDKSATECLPEYMKGVYIDLYETVNELAREAYKSQGRDTLNYARQALEDYLGSYLKEAEWISTGYIPTFEEYLVNGKVSSAHRIATLQPILMLDVPFPPHVLQEIDFPSKFNDLAGSILRLRGDTRCYQNDRARGEEASCISCYMKDNPGSTEEDALNHINGMIEKQIKELNWELLKPDKNVPISSKKHAFNISRGLHHFYKYRDGYTVANSETRNLVIKTVLEPVPM

Annotated regions:
phrase: LWDDNFIQSLSSPYGASSYAERAERLIGEVKEIFNRISMANGELVSHVDDLLQHLSMVDNVERLGIDRHFQTEIKVSLDYVYSYWSEKGIGPGRDIVCADLNTTALGFRLLRLHGYTMFPDVFEQFKDQMGRIACSTNQTERQISSILNLFRASLIAFPWEKVMEEAEIFSTAYLKEALQTIPVSSLSREIQYV
type: DOMAIN
name: Terpene_synth_N
description: Terpene synthase, N-terminal domain

phrase: EKLLELAKVEFNIFNSLQQNELKCVSRWWKESGSPDLTFIRHRQVEFYTLVSGIDMEPKRSTFRINFVKICHFVTILDDMYDTFGTIDELRLFTAAVKRWDKSATECLPEYMKGVYIDLYETVNELAREAYKSQGRDTLNYARQALEDYLGSYLKEAEWISTGYIPTFEEYLVNGKVSSAHRIATLQPILMLDVPFPPHVLQEIDFPSKFNDLAGSILRLRGDTRCYQNDRARGEEASCISCYMKDNPGSTEEDALNHINGMIEKQIKELNWELLKPDKNVPISSKKHAFNISRGLHHFYKYRDGYTVANSETRNLVIKTVLEP
type: DOMAIN
name: Terpene_cyclase-like_1_C
description: Terpene cyclase-like 1, C-terminal domain

phrase: PDLTFIRHRQVEFYTLVSGIDMEPKRSTFRINFVKICHFVTILDDMYDTFGTIDELRLFTAAVKRWDKSATECLPEYMKGVYIDLYETVNELAREAYKSQGRDTLNYARQALEDYLGSYLKEAEWISTGYIPTFEEYLVNGKVSSAHRIATLQPILMLDVPFPPHVLQEIDFPSKFNDLAGSILRLRGDTRCYQNDRARGEEASCISCYMKDNPGSTEEDALNHINGMIEKQI
type: DOMAIN
name: Terpene_synthase_metal-bd
description: Terpene synthase, metal-binding domain
Protein sequence:
MKHLKNNTKKFTALLFALLFSMSIAGCNMIEKTPEAIEKSPVAKVGKKTITRGELDTYPILAEQLTKLKEQFGGDLSKNAEIKDQLIQFKSQVLEQMIQEEIVFEKSEELKVDNAKVEKEVEKNLKNFMDQGFQGNKDKYKEDLKKMGTTEESIKRFFKAQVITEEVSKQVVKDVKVDDNTAKKHYEESKYTFTVNKPTFHAQHVLVKTEEEAKKVKARLDKGEDIKKIAKELSIDPSAKENSGDLGKAPYSSMVKPFADAIVKLNKGEISQPVKSQFGYHVIKLIDKDEVTFKDFNSVKEQIKKDLLETEKRKVFNEKIEQWKKELKVETKKYEKNII

Annotated regions:
phrase: KPTFHAQHVLVKTEEEAKKVKARLDKGEDIKKIAKELSIDPSAKENSGDLGKAPYSSMVKPFADAIVKLNKGEISQPVKSQFGYHVIKLI
type: DOMAIN
name: PPIase_PpiC
description: Peptidyl-prolyl cis-trans isomerase, PpiC-type
Protein sequence:
MSNVQTGAERMPHDLSHLGFLAGQIGRLITISTTPVIAGDSFEMDAVGALRLSPLRRGLAIDSTVDIFTFYVPHRHVYGERWIKFMKDGVNATPLPTVNTTSYIDHAAFLGTINPDTNKIPKHLFQGYLNIYNNYFKAPWMPDRTEANPNELNEDDARYGFRCCHLKNIWTAPLPPETELSRRMTTSTTSIDIMGLQAAYANLHTDQERDYFMQRYRDVISSFGGKTSYDADNRPLLVMRSNFWASGYDVDGTDQTSLGQFSGRVQQTYKHSVPRFFVPEHGTMFTLALVRFPPTATKEIQYLNAKGALTYTDIAGDPALYGNLPPREISMKDVFRSGDSSKKFKIAEGQWYRYAPSYVSPVYHLLEGFPFIQEPPSGDLQERVLIRHHDYDHCFQSVQLLQWNSQVKFNVTVYRNLPTTRDSIMTS

Annotated regions:
Protein sequence:
MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGLEPVPGEDNQFIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPTAYVKTFDGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRACYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKAQAETGEIKGHYLNATAGNCEDMMKRAVFARELGVPIVMHDYLTGGFTANTSLSQYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHSGTVVGKLEGEREITLGFVDLLRDDFIEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLATEGNEIIREATKWSPELAAACEVWKEIKFEFQAMDTLDTDKDKDKKR

Annotated regions:
phrase: GIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRACYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKAQAETGEIKGHYLNATAGNCEDMMKRAVFARELGVPIVMHDYLTGGFTANTSLSQYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHSGTVVGKLEGEREITLGFVDLLRDDFIEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLATEGNEIIREATKWSPELAAACEV
type: DOMAIN
name: RuBisCO_lsu_C
description: Ribulose bisphosphate carboxylase, large subunit, C-terminal

phrase: YYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGLEPVPGEDNQFIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPTA
type: DOMAIN
name: RuBisCO_lsu_fd_N
description: Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal

phrase: GLDFTKDD
type: ACTIVE_SITE
name: RuBisCo_large_chain_AS
description: Ribulose bisphosphate carboxylase, large chain, active site
Protein sequence:
MADMSVKQLADLVRTTPERLLEQLKEAGVAITHVDQTISDEEKRKLLLHLKTSHSTETDKKRSKIVLKRKKLSVVKSGKKSVNVEIRSKRTYTKPVVEQKRETEPAPTQEVPLTSDTTNLNEKAEVNVATLEKAVEAEVKEEAKKTPSEKKETPKKGPRKETRRSRKPDKEDKWEREELHMTKLVEERRRRHKPAHMPDSDSASAKLEQGFARPTAPVVREVALPESITVADLAQKMSVKAAEVIKAMMKLGAMVTINQRIDQETAAIVVEEMGHKPKLIKEDVLEENLVATLGEQTGEAVPRAPVVTIMGHVDHGKTSLLDYIRRTKVTSTEAGGITQHIGAYHVETELGMITFLDTPGHEAFTAMRARGAKCTDIVVLVVAADDGVMPQTVEAIQHARAAKVPVVVAVNKIDKPEADPERIKTELSTHDVLPEEWGGDTMFQPISAKTGEGIDALLERILLQAEVLELKAVDNGPARGMVVESRLDRGRGPVATVLVTSGELHLGDILLVGREYGRVRAMIGDDGRPCESAGPSMPVEVLGLSGTSVAGEEAIVVPDERKAREIARFRQGKYREVRLAKKQTAHLERIFDRMGEGKQNTLNIVLKADVQGSLEALTEALNKLSTDEVKVNIIASGVGGITESDVNLAIASDAVVIGFNVRADAPTRVLVEREGVDLRYYSIIYDLIDEVKKALSGLLAPEFEEKIVGLAEVRDVFRSSKIGAIAGCMVVEGVVRRHLPIRVLRDNVVIYEGQLESLRRYKEDVAEVRQGTECGIGVKNYNDVKVGDQIEVYEKTQVHRTIA

Annotated regions:
phrase: PARGMVVESRLDRGRGPVATVLVTSGELHLGDILLVGREYGRVRAMIGDDGRPCESAGPSMPVEVLGLSGTSVAGEEAIVVPDERKAREIARFR
type: DOMAIN
name: IF2_II
description: Translation initiation factor IF-2, domain II

phrase: VVTIMGHVDHGKTSLLDYIRRTKVTSTEAGGITQHIGAYHVETELGMITFLDTPGHEAFTAMRARGAKCTDIVVLVVAADDGVMPQTVEAIQHARAAKVPVVVAVNKIDKPEADPERIKTELSTHDVLPEEWGGDTMFQPISAKTGEGIDALL
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: PARGMVVESRLDRGRGPVATVLVTSGELHLGDILLVGREYGRVRAMIGDDGRPCESAGPSMPVEVLGLSGTSVAGEEAI
type: DOMAIN
name: EF-G-like_DII
description: Elongation factor G-like, domain II

phrase: PRAPVVTIMGHVDHGKTSLLDYIRRTKVTSTEAGGITQHIGAYHVETELGMITFLDTPGHEAFTAMRARGAKCTDIVVLVVAADDGVMPQTVEAIQHARAAKVPVVVAVNKIDKPEADPERIKTELSTHDVLPEEWGGDTMFQPISAKTGEGIDALLERILLQAEVLEL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: VVTIMGHVDHGKTSLLDYIRRTKVTSTEAGGITQHIGAYHVETELGMITFLDTPGHEAFTAMRARGAKCTDIVVLVVAADDGVMPQTVEAIQHARAAKVPVVVAVNKIDKPEADPERIKTELSTHDVLPEEWGGDTMFQPISAKTGEGIDALLERI
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: MADMSVKQLADLVRTTPERLLEQLKEAGVAITHVDQTISDEEKRKLLLHLK
type: DOMAIN
name: IF2_N
description: Translation initiation factor IF-2, N-terminal

phrase: PESITVADLAQKMSVKAAEVIKAMMKLGAMVTINQRIDQETAAIVVEEMGH
type: DOMAIN
name: IF2_N
description: Translation initiation factor IF-2, N-terminal

phrase: RLAKKQTAHLERIFDRMGEGKQNTLNIVLKADVQGSLEALTEALNKLSTDEVKVNIIASGVGGITESDVNLAIASDAVVIGFNVRADAPTRVLVEREGVDLRYYSIIYDLIDEV
type: DOMAIN
name: TIF_IF2_dom3
description: Translation initiation factor IF- 2, domain 3
Protein sequence:
MKLLVKAPAKINLSLDVLGKRQDGYHEVKMIMTTIDLADRLELTELTEDRIEIVSHNRYVPDDQRNLAYQAAKLLKEKYQVKQGVSIAIEKTIPVAAGLAGGSSDAAATLRGLNKIWNLGLTMDELAELGAEIGSDVSFCVYGGTAIATGRGEKIEHIKTPPSCWVILAKPHIGVSTADVYGNLKLNRVTHPDVDQMAEAINRGDYQGICNAVGNVLEDVTFAMHPEVARIKTRMKRFGADAVLMSGSGPTVFGLVHHDSRMHRIYNGLKGFCEQVYAVRLLGERETLE

Annotated regions:
phrase: NLAYQAAKLLKEKYQVKQGVSIAIEKTIPVAAGLAGGSSDAAATLRGLNKIWNLGLTMDELAELGAEIGSDVSFCVYG
type: DOMAIN
name: GHMP_kinase_N_dom
description: GHMP kinase N-terminal domain

phrase: MAEAINRGDYQGICNAVGNVLEDVTFAMHPEVARIKTRMKRFGADAVLMSGSGPTVFGLVHHDSRMHRIYNGLKGF
type: DOMAIN
name: GHMP_kinase_C_dom
description: GHMP kinase, C-terminal domain
Protein sequence:
MKNIMILSGAGLSAPSGLKTFRDNDGLWEEYDVMEVCSATGFRKNPKKVLDFYDARRAQLQNVKPNHAHEKIAQLKEKWGKNLFVITQNVDDLLERAGCKDVVHLHGFLPELRCLKCEGIFNIGYEKFTDKQCPKCKSKDLRHNIVMFEEQAPAYATLYSLLHQTSLFISIGTSGAVLPVGQYASMCEKSILNIYEKDVNLERYFDKIYIEDIISAIDKIALDIENFMKDGNV

Annotated regions:
phrase: MKNIMILSGAGLSAPSGLKTFRDNDGLWEEYDVMEVCSATGFRKNPKKVLDFYDARRAQLQNVKPNHAHEKIAQLKEKWGKNLFVITQNVDDLLERAGCKDVVHLHGFLPELRCLKCEGIFNIGYEKFTDKQCPKCKSKDLRHNIVMFEEQAPAYATLYSLLHQTSLFISIGTSGAVLPVGQYASMCEKSILNIYEKDVNLERYFDKIYIEDIISAIDKIALDIENFMK
type: DOMAIN
name: Ssirtuin_cat_dom
description: Sirtuin family, catalytic core domain
Protein sequence:
MHPAAEHSPLGKSSEYISTYTPSLLFPIPRAAKWAELGLSAETLPYKGVDFWNCFELSWLLPSGKPVVAIGEFSIPADSPNIIESKSFKLYLNSLNQTAFADTASLEATLRTDLSAAAGKPVTVRIRTLAESEAEGVMALPGVCIDDLDISVSNYEHPRPELLRCDDARVVEESVHSHLLKSNCPVTSQPDWGSVVVEYRGHALDHASLLEYIVSFRQHSDFHEQCVERIFLDLQRLLKPEKLTVYARYVRRGGLDINPYRSTEDVAFQNVRLARQ

Annotated regions:
phrase: YISTYTPSLLFPIPRAAKWAELGLSAETLPYKGVDFWNCFELSWLLPSGKPVVAIGEFSIPADSPNIIESKSFKLYLNSLNQTAFADTASLEATLRTDLSAAAGKPVTVR
type: DOMAIN
name: QueF_N
description: NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal
Protein sequence:
MSYNRRSKNITQGVARSPNRSMYYALGYQKEDFDKPMIGIANGHSTITPCNAGLQRLSDAAVAAVKDAGANPQIFGTPTISDGMSMGTEGMKYSLVSREVIADCIETCVQGQWMDGVVVVGGCDKNMPGGMIALARINVPGIYVYGGTIRPGHWKGHDLTIVSSFEAVGEFTAGRMSQEDFEGVEKNACPTTGSCGGMYTANTMSSSFEALGMSLLYSSTMANPDQEKVDSAAESARVLVEAVKKDLKPRDIITKQSIENAVSVIMATGGSTNAVLHYLAIAHAAEIDWSIEDFERIRKRVPVICDLKPSGQYVATDLHAAGGIPQVMKLLLDAGLLHGDCMTITGRTLAEELKDVPSVPRADQKVIHPIDQALYKEGHLAILKGNLAEDGAVAKITGLKNPVITGPARVFDDEQSALAAILDDRIRAGDVVVLRYLGPQGGPGMPEMLAPTSAIIGKGLGESVGLITDGRFSGGTWGMVVGHVAPEAFVGGTIALVQEGDSITIDAHKLLLQLNVDDAELARRRVAWKQPAPRYTRGVLAKYAALARPANQGAVTG

Annotated regions:
phrase: KVIHPIDQALYKEGHLAILKGNLAEDGAVAKITGLKNPVITGPARVFDDEQSALAAILDDRIRAGDVVVLRYLGPQGGPGMPEMLAPTSAIIGKGLGESVGLITDGRFSGGTWGMVVGHVAPEAFVGGTIALVQEGDSITIDAHKLLLQLNVDDAELARRRVAWKQPAPRYTRGVLAKYAALARPANQG
type: DOMAIN
name: ILV_EDD_C
description: Dihydroxy-acid/6-phosphogluconate dehydratase, C-terminal

phrase: CDKNMPGGMI
type: CONSERVED_SITE
name: DiOHA_6PGluconate_deHydtase_CS
description: Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site

phrase: GLITDGRFSGG
type: CONSERVED_SITE
name: DiOHA_6PGluconate_deHydtase_CS
description: Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site

phrase: KPMIGIANGHSTITPCNAGLQRLSDAAVAAVKDAGANPQIFGTPTISDGMSMGTEGMKYSLVSREVIADCIETCVQGQWMDGVVVVGGCDKNMPGGMIALARINVPGIYVYGGTIRPGHWKGHDLTIVSSFEAVGEFTAGRMSQEDFEGVEKNACPTTGSCGGMYTANTMSSSFEALGMSLLYSSTMANPDQEKVDSAAESARVLVEAVKKDLKPRDIITKQSIENAVSVIMATGGSTNAVLHYLAIAHAAEIDWSIEDFERIRKRVPVICDLKPSGQYVATDLHAAGGIPQVMKLLLDAGLLHGDCMTITGRTLA
type: DOMAIN
name: ILV_EDD_N
description: Dihydroxy-acid/6-phosphogluconate dehydratase, N-terminal
Protein sequence:
MVSSFTSAPRSGFYYFAQGWKLVSQPGIRRFVILPLLVNILLMGGAFWWLFTQLDVWIPTLMSYVPDWLQWLSYLLWPLAVISVLLVFGYFFSTIANWIAAPFNGLLAEQLEARLTGATPPDTGIFGIMKDVPRIMKREWQKFAWYLPRAIVLLILYLIPGIGQTVTPVLWFLFSAWMLAIQYCDYPFDNHKVPFKEMRTALRTRKITNMQFGALTSLFTMIPLLNLFIMPVAVCGATAMWVDCYRDKHAMWR

Annotated regions:
Protein sequence:
MNAQEANFDGLVGPTHNYAGLSFGNVASLNNEKSAANPKAAAKQGLRKMKQLADLGFAQGVLPPQERPSLRLLRELGFSGKDADVIAKAAKQAPELLAAASSASAMWTANAATVSPSADTSDGRVHFTPANLCSKLHRAIEHEATRRTLSTLFADPTHFAVHEALTGTPALGDEGAANHTRFCAEYGKPGIEFFVYGRAEYRRGPEPKRFPARQTFEASRAVAHRHGLAEEATVYAQQDPDVIDAGVFHNDVISVGNRDTLFTHERAFVNKQAIYDTLTAALDARGARLNVIEVPDAAVSVNDAVTSYLFNSQLLSRADGSQVLVVPQECRENARVAAYLDQLAAGNGPIHDVLVFDLRESMKNGGGPACLRLRVVLNDAERAAVTSNVWINDTLFASLDAWIDKHYRDRLAPEDLADPALLDESRTALDELTQILRVGSLYDFQR

Annotated regions:
Protein sequence:
MPLASLEVGQHLYWQIGGLKVHGQVLITSWIVIGILVIVSVLATRKVERIPSGLQNFMEYALEFVRDLTKNQIGEKEYRPWVPFIGTLFLFIFVSNWSGALFPWKLISLPEGELAAPTNDINTTVALALCTSFVYFYAGFRKKGLGYFRKYIEPTPVLLPIAILEDFTKPLSLSFRLFGNILADELVVAVLVLLVPLIVPLPVMLLGLFTSGIQALVFATLAGAYIHESLEGHGEEEEAH

Annotated regions:
phrase: SLSFRLFGN
type: ACTIVE_SITE
name: ATP_synth_F0_asu_AS
description: ATP synthase, F0 complex, subunit A, active site
Protein sequence:
MERYESLFAQLKERKEGAFVPFVTLGDPGIEQSLKIIDTLIEAGADALELGIPFSDPLADGPTIQNATLRAFAAGVTPAQCFEMLALIRQKHPTIPIGLLMYANLVFNKGIDEFYAQCEKVGVDSVLVADVPVEESAPFRQAALRHNVAPIFICPPNADDDLLRQIASYGRGYTYLLSRAGVTGAENRAALPLNHLVAKLKEYNAAPPLQGFGISAPDQVKAAIDAGAAGAISGSAIVKIIEQHINEPEKMLAALKVFVQPMKAATRS

Annotated regions:
phrase: LELGIPFSDPLAD
type: ACTIVE_SITE
name: Trp_synthase_alpha_AS
description: Tryptophan synthase, alpha chain, active site
Protein sequence:
MASITTTTNFFESIPRPTKTYRSASYDRISTRHGFNGTGKTVLITGGSSGIGLSIAKAFAGAGVARIAILSRSRATQLTAKAEIEAAYPSTSILLFEASVTDADRFASVLEELAGVHVLVLCAAAVHARVPLAELSGKDVQHVFDTNSVSTVNLARLYTATPGKDKTILHVSSAVAQMYAPLRSVYGASKAAAVQAMQHLAREHQGTGDRVRVFSFHPGAITTPASGAIYTPGAVQWDDADLPAHFSLWLAGPESDFLNGRYVWANWDVDELVALKERLACDGRFLTIGLVL

Annotated regions:
Protein sequence:
MATTNDLKNGMTLDLDGELWNVVEFQHVKPGKGPAFVRTKLKHVLTGKVVDKTFNAGVKVDVATVDKRTMQYLYREGDSFVFMDTETYDQYHIPAQTVGDAANFLLENAEAVVALHEGTPLYVELPAAVELTITYTEPGVQGDRSTGGTKPATLETGAQIQVPLFITTGEKVKVDTRTGEYLGRANS

Annotated regions:
phrase: VELTITYTEPGVQGDRSTGGTKPATLETGAQIQVPLFITTGEKVKVDTRTGEYLG
type: DOMAIN
name: Elong-fact-P_C
description: Elongation factor P, C-terminal

phrase: KRTMQYLYREGDSFVFMDTETYDQYHIPAQTVGDAANFLLENAEAVVALHEGTP
type: DOMAIN
name: Transl_elong_P/YeiP_cen
description: Translation elongation factor P/YeiP, central

phrase: VELTITYTEPGVQGDRSTGGTKPATLETGAQIQVPLFITTGEKVKVDTRTGEYLG
type: DOMAIN
name: Elong-fact-P_C
description: Elongation factor P, C-terminal

phrase: VELTITYTEPGVQGDRSTGGTKPATLETGAQIQVPLFITTGEKVKVDTRTGEYLG
type: DOMAIN
name: Elong-fact-P_C
description: Elongation factor P, C-terminal

phrase: TTNDLKNGMTLDLDGELWNVVEFQHVKPGKGPAFVRTKLKHVLTGKVVDKTFNAGVK
type: DOMAIN
name: Transl_elong_KOW-like
description: Translation elongation factor, KOW-like

phrase: DKRTMQYLYREGDSFVFMDTETYDQYHIPAQTVGDAANFLLENAEAVVALHEGTPLYVEL
type: DOMAIN
name: Transl_elong_P/YeiP_cen
description: Translation elongation factor P/YeiP, central

phrase: KPATLETGAQIQVPLFITT
type: CONSERVED_SITE
name: Transl_elong_P/YeiP_CS
description: Translation elongation factor P/YeiP, conserved site

phrase: RTMQYLYREGDSFVFMDTETYDQYHIPAQTVGDAANFLLENAEAVVALHEGTP
type: DOMAIN
name: Transl_elong_P/YeiP_cen
description: Translation elongation factor P/YeiP, central
Protein sequence:
MTNVQRSRRQVRLSRALGIALTPKAQRIFEKRPYAPGEHGRTRRRTESDYAVRLREKQRLRAQYGISEKQLRAAYEKGTHTAGQTGNAMLTDLETRLDALVLRAGFARTTAQARQFVVHRHILVDGNIVDRPSYRVKPGQTIQVKAKSQTMVPFQAAAEGVHRDVLPAVPGYLDVNLPSLKATLTRKPEAEEIPVQVNIQYVVEFYAR

Annotated regions:
phrase: LETRLDALVLRAGFARTTAQARQF
type: CONSERVED_SITE
name: Ribosomal_uS4_CS
description: Small ribosomal subunit protein uS4, conserved site

phrase: RQVRLSRALGIALTPKAQRIFEKRPYAPGEHGRTRRRTESDYAVRLREKQRLRAQYGISEKQLRAAYEKGTHTAGQTGNAMLTD
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: TRLDALVLRAGFARTTAQARQFVVHRHILVDGNIVDRPSYRVKPGQTIQVKAKSQTMVPFQAAA
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: RLDALVLRAGFARTTAQARQFVVHRHILVDGNIVDRPSYRVKPGQT
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: QRSRRQVRLSRALGIALTPKAQRIFEKRPYAPGEHGRTRRRTESDYAVRLREKQRLRAQYGISEKQLRAAYEKGTHTAGQTGNAMLTDL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal
Protein sequence:
MNKSESLYAAAQQLIPGGVNSPVRAFNGVGGTPLFIERADGAYLYDVDEQAYIDYVGSWGPMVLGHNHPSIRDAVIAAAERGLSFGAPTEMEVQMARLVTSLVPSMDMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPADFARHTLTCVYNDLSSVRTTFEQYPDEIAAIIVEPVAGNMNCVPPLPDFLPGLRALCDEFGALFIIDEVMTGFRVALAGAQSHYGVVPDLTCLGKIIGGGMPVGAFGGKREVMQALAPTGPVYQAGTLSGNPIAMAAGFACLTEVAKPGVHEKLTALTNQLADGLLAAAKAENIPLVVNQAGGMFGLFFTDAESVTCYQDVMKCDVERFKRFFHMMLEEGIYLAPSAFEAGFMSLAHTPQDIERTIEAAQICFSRL

Annotated regions:
phrase: FIIDEVMTGFRVALAGAQSHYGVVPDLTCLGKIIGG
type: CONSERVED_SITE
name: Aminotrans_3_PPA_site
description: Aminotransferases class-III pyridoxal-phosphate attachment site