Protein sequence:
MGARSSVLSGKKTDELEKVRLRPGGKKRYCLKHIIWAVNELDRFGLAESLLESKEGCHKILTVLAPLVPTGSENLKSLFNTVCVIYCLHAEEKVKDTEEAKKIAQRHLAADTEKMPATSRPTAPPSGGNYPVQQIAGNYVHMPLSPRTLNAWVKLVEEKKFGAEVVPGFQALSEGCTPYDINQMLNCVGDHQAAMQIIREIINEEAADWDQQHPIPGPLPAGQLRDPRGSDIAGTTSTVEEQIQWMYRAQNPVPVGNIYRRWIQIGLQKCVRMYNPTNILDIKQGPKEPFQSYVDRFYKSLRAEQTDPAVKNWMTQTLLIQNANPDCKLVLKGLGMNPTLEEMLTACQGIGGPGQKARLMAEALKEALTPAPIPFAAAQQKAGKRGTVTCWNCGKVGHTAKQCRAPRRQGCWKCGKQGHIMSKCPERQAGFLRVRTLGKEASQLPHDPSASGSDTICTPDGPSRGHDTSGGDTICAPCRSSSGDAEKLHEDGETAEREPRETLQGGDRGFAAPQFSLWRRPVVRACIEGQPVEVLLDTGADDSIVAGIELGSNYTPKIVGGIGGFINTKEYKDVEIEVVGKRVRATIMTGDTPINIFGRNILNTLGMTLNFPVAKIEPVKVKLKPGKDGPKIRQWPLSKEKILALKEICEKMEKEGQLEEAPPTNPYNTPTFAIKKRDKNKWRMLIDFRELNKVTQDFTEVQLGIPHPAGLAEKRRITVLDVGDAYFSIPLDPNFRQYTAFTLPSINNAEPGKRYIYKVLPQGWKGSPAIFQYSMRKVLDPFRKANSDVIIIQYMDDILIASDRSDLEHDRVVSQLKELLNDMGFSTPEEKFQKDPPFKWMGYELWPKRWKLQKIQLPEKEVWTVNDIQKLVGVLNWAAQLFPGIKTRHICKLIRGKMTLTEEVQWTELAEAELQENKIILEQEQEGSYYKEGVPLEATVQKNLANQWTYKIHQGNRILKVGKYAKVKNTHTNGVRLLAHVVQKIGKEALVIWGEIPVFHLPVERETWDQWWTDYWQVTWIPEWDFVSTPPLVRLAYNLVKDPLEKVETYYTDGSCNRASKEGKAGYVTDRGKDKVKVLEQTTNQQAELEAFALALQDSGPQVNIIVDSQYVMGIVAGQPTETESPLVNQIIEEMIKKEAIYVGWVPAHRGLGGNQEVDHLVSQGIRQVLFLEKIEPAQEEHEKYHGNVKELVHKFGLPQLVAKQIVNSCDKCQQKGEAVHGQVNAELGTWQMDCTHLEGKVIIVAVHVASGFIEAEVIPQETGRQTALFLLKLASRWPITHLHTDNGANFTSQDVKMAAWWIGIEQTFGVPYNPQSQGVVEAMNHHLKNQIDRIRDQAVSIETVVLMAAHCMNFKRRGGIGDMTPAERLVNMITTEQEIQFFQAKNLKFQNFQVYYREGRDQLWKGPGELLWKGEGAVLIKVGTEIKVIPRRKAKIIRHYGGGKELDCGTDMEDTRQAREMAQSGQVPEA

Annotated regions:
phrase: FQVYYREGRDQLWKGPGELLWKGEGAVLIKVGTEIKVIPRRKAKIIR
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: VYYREGRDQLWKGPGELLWKGEGAVLIKVGTEIKVIPRRKAKI
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: IKKRDKNKWRMLIDFRELNKVTQDFTEVQLGIPHPAGLAEKRRITVLDVGDAYFSIPLDPNFRQYTAFTLPSINNAEPGKRYIYKVLPQGWKGSPAIFQYSMRKVLDPFRKANSDVIIIQYMDDILIASDRSDLEHDRVVSQLKELLNDMGFSTPEEKFQKDPPFKWMGYE
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: IEGQPVEVLLDTGADDSIVAGIELGSNYTPKIVGGIGGFINTKEYKDVEIEVVGKRVRATIMTGDTPINIFGRNI
type: DOMAIN
name: Retropepsin-like_cat_dom
description: Retropepsin-like catalytic domain

phrase: VETYYTDGSCNRASKEGKAGYVTDRGKDKVKVLEQTTNQQAELEAFALALQDSGPQVNIIVDSQYVMGIVAGQPTETESPLVNQIIEEMIKKEAIYVGWVPAHRGLGGNQEVDHLVSQG
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: AELGTWQMDCTHLEGKVIIVAVHVASGFIEAEVIPQETGRQTALFLLKLASRWPITHLHTDNGANFTSQDVKMAAWWIGIEQTFGVPYN
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: VLLDTGADDSI
type: ACTIVE_SITE
name: Aspartic_peptidase_AS
description: Aspartic peptidase, active site

phrase: RSSVLSGKKTDELEKV
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: RPGGKKRYCLKHIIWAVN
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: DRFGLAESLLESKEG
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: TGSENLKSLFNTVCVIYCL
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: HAEEKVKDTEEAK
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: MYNPTNILDIKQGPKEPFQSYVDRFYKSLRAEQTDPAVKNWMTQTLLIQNANPDCKLVLKGLGMNPTLEEMLT
type: DOMAIN
name: Gag_p24_C
description: Retroviral nucleocapsid Gag protein p24, C-terminal domain

phrase: YYKEGVPLEATVQKNLANQWTYKIHQGNRILKVGKYAKVKNTHTNGVRLLAHVVQKIGKEALVIWGEIPVFHLPVERETWDQWWTDYWQVTWIPEWDFVS
type: DOMAIN
name: RVT_connect
description: Reverse transcriptase connection

phrase: LEKVETYYTDGSCNRASKEGKAGYVTDRGKDKVKVLEQTTNQQAELEAFALALQDSGPQVNIIVDSQYVMGIVAGQPTETESPLVNQIIEEMIKKEAIYVGWVPAHRGLGGNQEVDHLVSQGI
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: GARSSVLSGKKTDELEKVRLRPGGKKRYCLKHIIWAVNELDRFGLAESLLESKEGCHKILTVLAPLVPTGSENLKSLFNTVCVIYCLHAEEKVKDTEEAKKIAQRHLAADTEKMPATSRPTAPPSGGNYPVQQIAGN
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: GCWKCGKQGHIMSKCP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: TCWNCGKVGHTAKQC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: VEVLLDTGADDSIVAGIELGSNYTPKIVGGIGGFINTKEYKDVEIEVVGKRVRATIMTGDTPINIFGRN
type: DOMAIN
name: Peptidase_A2_cat
description: Peptidase A2A, retrovirus, catalytic

phrase: EKIEPAQEEHEKYHGNVKELVHKFGLPQLVAKQIVNSCDKC
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: CWNCGKVGHTAKQC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: LQKIQLPEKEVWTVNDIQKLVGVLNWAAQLFPGIKTRHICKLIRGKMTLTEEVQWTELAEAEL
type: DOMAIN
name: RVT_thumb
description: Reverse transcriptase thumb

phrase: AQEEHEKYHGNVKELVHKFGLPQLVAKQIVNSCDKCQ
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: CWKCGKQGHIMSKCP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: EGQLEEAPPTNPYNTPTFAIKKRDKNKWRMLIDFRELNKVTQDFTEVQLGIPHPAGLAEKRRITVLDVGDAYFSIPLDPNFRQYTAFTLPSINNAEPGKRYIYKVLPQGWKGSPAIFQYSMRKVLDPFRKANSDVIIIQYMDDILIASDRSDLEHDRVVSQLKELLNDMGFSTPEEKFQKDPPFKWMGYE
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: QVNAELGTWQMDCTHLEGKVIIVAVHVASGFIEAEVIPQETGRQTALFLLKLASRWPITHLHTDNGANFTSQDVKMAAWWIGIEQTFGVPYNPQSQGVVEAMNHHLKNQIDRIRDQAVSIETVVLMAAHCMNFKRRGGIGDMTPAERLVNM
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: TCWNCGKVGHTAKQCR
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: GCWKCGKQGHIMSKCP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: WRRPVVRACIEGQPVEVLLDTGADDSIVAGIELGSNYTPKIVGGIGGFINTKEYKDVEIEVVGKRVRATIMTGDTPINIFGRNILNTLGMT
type: DOMAIN
name: Retropepsins
description: Retropepsins