nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSRIVLGVSGGVAAYKAALLLRAFTEAGHDVRVVPTPGALHFVGAATFEALSGNPVTTDVWSDVPEVAHVRIGQNADLVVVAPATADLLARAAAGRADDLLTATLLTAHCPVVFVPAMHTEMWLHPATQDNVATLRRRGAIVLPPAVGRLTGPDSGPGRLPEPADVAALAAVVLEGGAAALPRDLAGRKVVISAGGTREPLDPVRYLGNRSSGKQGWALARVAAARGADVVLVAANVEAPVPFGVRVVAVETAEQLRTAMLAEAGAAGGATADVVVMSAAVADFRPAGVAATKLKKGSAGEPTAVELVRNPDVLTELVGERAPGQLVVGFAAETGDADADVLTHARAKLARKGCDLLVVNDVSAGQVFGRPDNAVVVLAADGPATEVPRGSKDAVAAGIWTAVAARLTPPGRA

Annotated regions:
phrase: LAGRKVVISAGGTREPLDPVRYLGNRSSGKQGWALARVAAARGADVVLVAANVEAPVPFGVRVVAVETAEQLRTAMLAEAGAAGGATADVVVMSAAVADFRPAGVAATKLKKGSAGEPTAVELVRNPDVLTELVGERAPGQLVVGFAAETGDADADVLTHARAKLARKGCDLLVVNDVSAGQVFGRPDNAVV
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal

phrase: RIVLGVSGGVAAYKAALLLRAFTEAGHDVRVVPTPGALHFVGAATFEALSGNPVTTDVWSDVPEVAHVRIGQNADLVVVAPATADLLARAAAGRADDLLTATLLTAHCPVVFVPAMHTEMWLHPATQDNVATLRRRGAIVLPPAVGRLTGPDSGPGRLPEPAD
type: DOMAIN
name: Flavoprotein
description: Flavoprotein
Protein sequence:
MQRGKISFGKIKLNVNVPPAEPRSNETEAEDAKESTEASGNGGGFKKMDKEQMIRQIEDVAEDLESQHLKEVMGISGFGRKAAKVFDINEQIEKARVTRPGMDKKREESKPKEDDQKDEEEEDVIGPLPPAVTTDKEKATKESSKDEDSDDDDYSSDEDSDDEQSLAKRIPYTHEVQMQHGSRAVLALAGDPSGARLVSGSIDYDMCFWDFAGMDSSMRSFRQLQPCENHPIRSLQYSVTGDMILVISGNAQAKVLDRDGFEKLECCKGDQYISDMSRTKGHVAQLTSGCWHPFNREQFLTAALDGTLRIWQGLKSKEQLQVIKTRAQGGLRTNAASCNFNRDATLIAAGCVDGSIQTWDTRKMFVNTTHCVRDAHQKGSEITSIVFSYMGQQLATRSNDETMKLWDLRQFKQPLHTWTNLFSRYDTTDCCFSPDDRLLVTGESLPKGQAEANLYFYSTKSYEEVQRIPVSNAHVVKTLWHPKLNQLFVSCGNGTIKCYYDEHRSIRGAKLCVVKTHRKRQPMEMVGVSQIITPHALPLFRQEKSRTSRKRMEKARMDPVKSQRPDLPITSGQGGRVASSGGTLSSYVIRNLGLSKRVDDDQDPREAILKYAKDAAENPYWIAPAYKQTQPKAIFSEKLPADEPATKKPKTEADK

Annotated regions:
phrase: GDQYISDMSRTKGHVAQLTSGCWHPFNREQFLTAALDGTLRIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: SMRSFRQLQPCENHPIRSLQYSVTGDMILVISGNAQAKVL
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: SYEEVQRIPVSNAHVVKTLWHPKLNQLFVSCGNGTIKCY
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: TTHCVRDAHQKGSEITSIVFSYMGQQLATRSNDETMKLW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: PYTHEVQMQHGSRAVLALAGDPSGARLVSGSIDYDMCFW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: SKEQLQVIKTRAQGGLRTNAASCNFNRDATLIAAGCVDGSIQTW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: IAAGCVDGSIQTWD
type: CONSERVED_SITE
name: WD40_repeat_CS
description: WD40 repeat, conserved site

phrase: AHQKGSEITSIVFSYMGQQLATRSNDETMKLWDL
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: TKGHVAQLTSGCWHPFNREQFLTAALDGTLRIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: KGHVAQLTSGCWHPFNREQFLTAALDGTLRI
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: DAHQKGSEITSIVFSYMGQQLATRSNDETMKLW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: QHGSRAVLALAGDPSGARLVSGSIDYDMCFW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: SCNFNRDATLIAAGCVDGSIQTW
type: REPEAT
name: WD40_rpt
description: WD40 repeat
Protein sequence:
MNSDASATTNSWAINFDHVSVTYPNGTKALDDVSLTINPGEMVAIVGLSGSGKSTLIRTINGLVRATEGTVTVGPHQINTLKGKALRDARGQIGMIFQGFNLSERSSVFQNVLVGRFAHTAWWRNLLGFPTEHDKQIAFHALESVGILDKVWTRAGALSGGQKQRVAIARALSQDPSVMLADEPVASLDPPTAHSVMRDLENINNVEGLTVLVNLHLIDLARQYTTRLVGLRAGKLVYDGPISEATDKDFEAIYGRPIQAKDLLGDRA

Annotated regions:
phrase: INFDHVSVTYPNGTKALDDVSLTINPGEMVAIVGLSGSGKSTLIRTINGLVRATEGTVTVGPHQINTLKGKALRDARGQIGMIFQGFNLSERSSVFQNVLVGRFAHTAWWRNLLGFPTEHDKQIAFHALESVGILDKVWTRAGALSGGQKQRVAIARALSQDPSVMLADEPVASLDPPTAHSVMRDLENINNVEGLTVLVNLHLIDLARQYTTRLVGLRAGKLVYDGPISEATDKDFEAIYGRP
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: LSGGQKQRVAIARA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: PGEMVAIVGLSGSGKSTLIRTINGLVRATEGTVTVGPHQINTLKGKALRDARGQIGMIFQGFNLSERSSVFQNVLVGRFAHTAWWRNLLGFPTEHDKQIAFHALESVGILDKVWTRAGALSGGQKQRVAIARALSQDPSVMLADEPVASLDPPTAHSVMRDLENINNVEGLTVLVNLHLIDLARQYTTRLVGLRAGKLVYDGPI
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LDDVSLTINPGEMVAIVGLSGSGKSTLIRTINGLVRATEGTVTVGPHQINTLKGKALRDARGQIGMIFQGFNLSERSSVFQNVLVGRFAHTAWWRNLLGFPTEHDKQIAFHALESVGILDKVWTRAGALSGGQKQRVAIARALSQDPSVMLADEPV
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain
Protein sequence:
MSYFFGSTVPFAEPLWYSRPENFRYNESHRRLRESVRGYIEAEIMPFCTQWEADGEVPSHVLKRHAALGYAAALINPSAVKEHMHDVRLPGDVPPREWDEFHGLIVADEVARCGSLGVLWALGCGTAIACPILVNYGTEEQKAKFLPPVIHGESRFCLGITEPEVGSDIANLVTRAEQEGNYFIVNGTKKWVTNGTFADYCIAAVRTGQAGRTGISLLNIPLDVAGVSREKIESSGVASGGTASITFDNVQVPVENLLGEKNKGFYMLMSSFDHHRSWIAANCLRLARVCLEDAYQYALTRQTFGKPLINHQTIRLKLANIGIQITSSYALLESLTEMRQNLSVKMGQVHRGIGGLCAITKVAAARTFELAVRESQQIMGASAYTRTGPGLRVERLSRDMRVLVIGGGSEEILSEMSVVQEQKDLNRCKSCP

Annotated regions:
phrase: CLGITEPEVGSDIANLVTRAEQEGNYFIVNGTKKWVTNGTFADYCIAAVRTGQAGRTGISLLNIPLDVAGVSREKIESSGVASGGTASITFDN
type: DOMAIN
name: Acyl-CoA_Oxase/DH_mid-dom
description: Acyl-CoA oxidase/dehydrogenase, middle domain

phrase: NKGFYMLMSSFDHHRSWIAANCLRLARVCLEDAYQYALTRQTFGKPLINHQTIRLKLANIGIQITSSYALLESLTEMRQNLSVKMGQVHRGIGGLCAITKVAAARTFELAVRESQQIMGASAYTRTGPGLRVERLSRDMRVLVIGGGSEEILS
type: DOMAIN
name: AcylCo_DH/oxidase_C
description: Acyl-CoA dehydrogenase/oxidase, C-terminal

phrase: ESHRRLRESVRGYIEAEIMPFCTQWEADGEVPSHVLKRHAALGYAAALINPSAVKEHMHDVRLPGDVPPREWDEFHGLIVADEVARCGSLGVLWALGCGTAIACPILVNYGTEEQKAKFLPPVIHG
type: DOMAIN
name: AcylCoA_DH/ox_N
description: Acyl-CoA dehydrogenase/oxidase, N-terminal
Protein sequence:
MEVKNIGIPHVLPPASVCDDPLCPWHGHLKVRLKLLEVTVEKVRMHKAAVVIHEWLHYIRKYNRYERRRKRMRVRVPECIEVKPGDKVIIAETRPLSKTIAWVVIGKKEDVVEWKAKHETLQA

Annotated regions:
phrase: GDKVIIAETRPL
type: CONSERVED_SITE
name: Ribosomal_uS17_CS
description: Small ribosomal subunit protein uS17, conserved site
Protein sequence:
MFEARLGQATILKKILDAIKDLLNEATFDCSDSGIQLQAMDNSHVSLVSLTLRSDGFDKFRCDRNLSMGMNLGSMAKILKCANNEDNVTMKAQDNADTVTIMFESANQEKVSDYEMKLMNLDQEHLGIPETDFSCVVRMPAMEFARICRDLAQFSESVVICCTKEGVKFSASGDVGTANIKLAQTGSVDKEEEAVIIEMQEPVTLTFACRYLNAFTKATPLSTQVQLSMCADVPLVVEYAIKDLGHIRYYLAPKIEDNET

Annotated regions:
phrase: MFEARLGQATILKKILDAIKDLLNEATFDCSDSGIQLQAMDNSHVSLVSLTLRSDGFDKFRCDRNLSMGMNLGSMAKILKCANNEDNVTMKAQDNADTVTIMFESANQEKVSDYEMKLMNLDQE
type: DOMAIN
name: Pr_cel_nuc_antig_N
description: Proliferating cell nuclear antigen, PCNA, N-terminal

phrase: GIPETDFSCVVRMPAMEFARICRDLAQFSESVVICCTKEGVKFSASGDVGTANIKLAQTGSVDKEEEAVIIEMQEPVTLTFACRYLNAFTKATPLSTQVQLSMCADVPLVVEYAIKDLGHIRYYLAP
type: DOMAIN
name: Pr_cel_nuc_antig_C
description: Proliferating cell nuclear antigen, PCNA, C-terminal

phrase: RCDRNLSMGMNLGSMAKI
type: CONSERVED_SITE
name: Pr_cel_nuc_antig_CS
description: Proliferating cell nuclear antigen, PCNA, conserved site

phrase: GIQLQAMDNSHVSLVSLTLRSDG
type: CONSERVED_SITE
name: Pr_cel_nuc_antig_CS
description: Proliferating cell nuclear antigen, PCNA, conserved site
Protein sequence:
MDSQKKLTFPLAVGLFIFMLCIIISCLFLLHVEPHIPLFLSVVMLSAAALWFGFPWKSIEKGIVDGIKNGVQPIIVLALIGILIGAWMYSGAIPTMTVYALSFIEPSHLLLTALFSCMIISTLVGSSLTTVSTIGVALIGVASAAGVPLEWTAGAVICGACFGDKMSPMSDTTNFAAGIGEIPIFEHIRHMMGTTIPALLITVVLFYFLGSSVSADAASTDNIQQVITGIKDAANVTPWALLSPLLVVLLAMKRVSVIPVLTAGIISSGILTAIFVPYSSLQAFMTALQNGTTFETDNEAAAKIINRGGLQSMMGSVSLIMIAFALGGLMEKIGLISALLEGVMKGIRSKGRLVAATVCSSIGVNLATGEQYLSILIPGQSFKSLYDKRNIQRKFLTRSLEDGGTLINPLIPWGVSGAFMASALGVPVIDYIPFTFFLYISPMISILIGFVKK

Annotated regions:
phrase: GACFGDKMSPMSDTTNFAAGIGEIPIFEHIRHMMGTTIPALLITVVLFYFLGSSVSADAASTDNIQQVITGIKDAANVTPWALLSPLLVVLLAMKRVSVIPVLTAGIISSGILTAIFVPYSSLQAFMTALQNGTTFETDNEAAAKIINRGGLQSMMGSVSLIMIAFALGGLMEKIGLISALLEGVMKGIRSKGRLVAATVCSSIGVNLATGEQYLSILIPGQSFKSLYDKRNIQRKFLTRSLEDGGTLINPLIPWGVSGAFMASALGVPVIDYIPFTFFLYISPMISILIGF
type: DOMAIN
name: Na/H_Antiport_NhaC-like_C
description: Na+/H+ antiporter, NhaC-like, C-terminal
Protein sequence:
MATVDVDTTTESGKAAAAAAPSPPAAACRRSSFSGADLALRALLFAVTLAGLIVLATAKQTVSIPVPEIPGLLVSRPAKFNHSPALIYLLVAQCVTCFYSLLTALTSLKLISGSSPTKTLFLLVLLDVLYAAIMASATGSAGGVAWIGLKGNTHTNWTKICNIYGNFCRHIGSSVFLGLVASVILVLLTILNAYCLYRRSR

Annotated regions:
phrase: SSFSGADLALRALLFAVTLAGLIVLATAKQTVSIPVPEIPGLLVSRPAKFNHSPALIYLLVAQCVTCFYSLLTALTSLKLISGSSPTKTLFLLVLLDVLYAAIMASATGSAGGVAWIGLKGNTHTNWTKICNIYGNFCRHIGSSVFLGLVAS
type: DOMAIN
name: CASP_dom
description: Casparian strip membrane protein domain
Protein sequence:
MYRPLVARLLRDSVATRKGSSHFARRFSHSLPFATVDAEELSGAKPAEVLNLVQGNWGGSSSWHTVVDPLNGEPFIKVAEVDETEIKPFVESLSKCPKHGLHNPFKSPERYLLYGDISTKAGHMLSIPKVSEFFARLIQRVAPKSYHQALGEVQVTQKFFENFTGDQVRFLARSFGVPGNHLGQQSNGFRWPFGPVAIITPFNFPLEIPVLQLMGALYMGNKPLLKVDSKVSIVMEQMMRLLHYCGLPVGDADFVNSDGKAMNKILLEANPRMTLFTGSSRVAEKLALDLKGRIKLEDAGFDWKILGPDVNEADYVAWVCDQDAYACSGQKCSAQSILFMHENWAATPLISRLKELAERRKLEDLTVGPVLTVTTEAMLDHLNKLLQIPGAKLLFGGKPLENHTIPSIYGAVKPTAVYVPLEEILKVSNYELVTKEIFGPFQVVTEYKNSQLPMVLEALERMHAHLTAAVVSNDQLFLQEVIGNTVNGTTYAGLRARTTGAPQNHWFGPAGDPRGAGIGTPEAIKLVWSCHREIIYDIGPVSHHWEIPPST

Annotated regions:
phrase: HTVVDPLNGEPFIKVAEVDETEIKPFVESLSKCPKHGLHNPFKSPERYLLYGDISTKAGHMLSIPKVSEFFARLIQRVAPKSYHQALGEVQVTQKFFENFTGDQVRFLARSFGVPGNHLGQQSNGFRWPFGPVAIITPFNFPLEIPVLQLMGALYMGNKPLLKVDSKVSIVMEQMMRLLHYCGLPVGDADFVNSDGKAMNKILLEANPRMTLFTGSSRVAEKLALDLKGRIKLEDAGFDWKILGPDVNEADYVAWVCDQDAYACSGQKCSAQSILFMHENWAATPLISRLKELAERRKLEDLTVGPVLTVTTEAMLDHLNKLLQIPGAKLLFGGKPLENHTIPSIYGAVKPTAVYVPLEEILKVSNYELVTKEIFGPFQVVTEYKNSQLPMVLEALERMHAHLTAAVVSNDQLFLQEVIGNTVNGTTY
type: DOMAIN
name: Aldehyde_DH_dom
description: Aldehyde dehydrogenase domain

phrase: YACSGQKCSAQ
type: CONSERVED_SITE
name: Ald_DH_CS_CYS
description: Aldehyde dehydrogenase, cysteine active site
Protein sequence:
MLKKCILLVFLCVGLIGLIGCSKTDSPEDRMEAFVKQWNDQQFDDMYQSLTKDVKKEISKKDFVNRYKAIYEQAGVKNLKVTAGEVDKDDQDNKTMKHIPYKVSMNTNAGKVSFKNTAVLKLEKTDDEESWNIDWDPSFIFKQLADDKTVQIMSIEPKRGQIYDKNGKGLAVNTDVPEIGIVPGELGDKKEKVIKELAKKLDLTEDDIKKKLDQGWVKDDSFVPLKKVKPDQEKLVSEATSLQGVTRTNVSSRYYPYGEKTAHLTGYVRAITAEELKKKKEGTYSDTSNIGIAGLENVYEDKLRGTTGWKIYVPQTGEVIAEKKAKDGEDLHLTIDIKTQMKLYDELKDDSGAAVALQPKTGETLALVSAPSYDPNGFIFGWSDKEWKKLNKDKNNPFSAKFNKTYAPGSTIKPIAAAIGIKNGTLKADEKKTIKGKEWQKDSSWGGYSVTRVSERLQQVDLENALITSDNIYFAQNALDMGADTFTKGLKTFGFSEDVPYEFPIQKSSIANDKLDSDILLADTGYGQGQMQMSPLHLATAYTPFVDNGDLVKPTLIKKDSQTADVWHKQVVTKEGAADITKGLKGVVEDERGSAYQPVVKGITVAGKTGTAELKTSKDDKDGTENGWFVGYDYENKDLLVAMMIQNVQDRGGSHYVVEKAKKQFQSN

Annotated regions:
phrase: GAAVALQPKTGETLALVSAPSYDPNGFIFGWSDKEWKKLNKDKNNPFSAKFNKTYAPGSTIKPIAAAIGIKNGTLKADEKKTIKGKEWQKDSSWGGYSVTRVSERLQQVDLENALITSDNIYFAQNALDMGADTFTKGLKTFGFSEDVPYEFPIQKSSIANDKLDSDILLADTGYGQGQMQMSPLHLATAYTPFVDNGDLVKPTLIKKDSQTADVWHKQVVTKEGAADITKGLKGVVEDERGSAYQPVVKGITVAGKTGTAELKTSKDDKDGTENGWFVGYDYENKDLLVAMMIQNVQDRGGSHYVVEKAK
type: DOMAIN
name: PCN-bd_Tpept
description: Penicillin-binding protein, transpeptidase

phrase: IEPKRGQIYDKNGKGLAVNTDVPEIGIVPGELGDKKEKVIKELAKKLDLTEDDIKKKLDQGWVKDDSFVPLKKVKPDQEKLVSEATSLQGVTRTNVSSRYYPYGEKTAHLTGYVRAITAEELKKKKEGTYSDTSNIGIAGLENVYEDKLRGTTGWKIYVPQTGEVIAE
type: DOMAIN
name: PBP_dimer
description: Penicillin-binding protein, dimerisation domain

phrase: SPEDRMEAFVKQWNDQQFDDMYQSLTKDVKKEISKKDFVNRYKAIYEQAGVKNLKVTAGEVDKDDQDNKTMKHIPYKVSMNTNAGKVSFKNTAVLKLEKTDDEESWNIDWDPSFIFKQLAD
type: DOMAIN
name: MecA_N
description: NTF2-like N-terminal transpeptidase
Protein sequence:
MPLLDSFTVDHTRMNAPAVRVAKHMSTPKGDAITVFDLRFCTPNKEILSERGIHTLEHLFAGFMRDHLNSSNVEIIDISPMGCRTGFYMSLIGEPTEHQVAVAWLAAMEDVLKVVEQSEIPELNEYQCGTYEMHSLEQAQEIARNIIAAGVSVNRNDDLKLSDEILGKL

Annotated regions:
Protein sequence:
MTYTLLNKIDDPADLRKLDRRQLDTLAEELRAYVLESVSQTGGHLSSNLGTVELTIALHYVFDTPNDRVVWDVGHQSYPHKILTGRRDRMSTLRQYGGISGFPRRAESEYDTFGTAHSSTSISAALGMALGARTRGEKRVGIAVIGDGAMTAGMAFEAMNNAGVYKDLPMLVVLNDNDMSISPPVGMLNKHLARLMSGQFYAATKKGIEKVLSVAPPVLEFAKRLEEHAKGMVVPATLFEEFGFDYVGPIDGHDLESLVPTLQNIRQRALEGHGPQFLHVVTKKGQGYKLAEADPILYHGPGKFNPAEGIRPSAKPSRKTYTQVFGEWLCDMAAADKRLIGVTPAMREGSGMVEFEKRFPDRYYDVGIAEQHAVTFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGVYDIPFLRCIPNMMVMVPADENECRQLLTTAFQQDCPTAVRYPRGAGVGVATQPELTALPVGKGEIRREGHARAGQRVAIMAFGSMVHPALTAAEQLDATVANMRFVKPLDVELVKQLAANHDFLVTVEEGATMGGAGSAVLEALAEAGIELPTLVLGLPDKFIDHGDPAHLLSLCGLDAAGIERSVRERFSLTAQPVKVASVA

Annotated regions:
phrase: RAYVLESVSQTGGHLSSNL
type: CONSERVED_SITE
name: Transketolase_CS
description: Transketolase conserved site

phrase: GADGATHAGVYDIPFL
type: BINDING_SITE
name: Transketolase_BS
description: Transketolase binding site

phrase: RAGQRVAIMAFGSMVHPALTAAEQLDATVANMRFVKPLDVELVKQLAANHDFLVTVEEGATMGGAGSAVLEALAEAGIELPTLVLGLPDKFIDHGDPAHLLSLCGLDAAG
type: DOMAIN
name: Transketolase_C
description: Transketolase, C-terminal domain

phrase: TYTQVFGEWLCDMAAADKRLIGVTPAMREGSGMVEFEKRFPDRYYDVGIAEQHAVTFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGVYDIPFLRCIPNMMVMVPADENECRQLLTTAFQQDCPTAVRYPRG
type: DOMAIN
name: Transketolase-like_Pyr-bd
description: Transketolase-like, pyrimidine-binding domain

phrase: KTYTQVFGEWLCDMAAADKRLIGVTPAMREGSGMVEFEKRFPDRYYDVGIAEQHAVTFAGGLACEGLKPVVAIYSTFLQRGYDQLIHDVALQNLPVVFALDRAGLVGADGATHAGVYDIPFLRCIPNMMVMVPADENECRQLLTTAFQQDCPTAVRYPRGAGVG
type: DOMAIN
name: Transketolase-like_Pyr-bd
description: Transketolase-like, pyrimidine-binding domain
Protein sequence:
XSQLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGGTKKMGEKAYKLEEILPIYEEMSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMAGPFPDKSD

Annotated regions:
phrase: EFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLM
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: TAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGE
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: EFMEAFKTFDREGQGLISSAEIRNVLKM
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: EFMEAFKTFDREGQGLISSAEIRNVLKML
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain
Protein sequence:
MMQESATETISNSSMNQNGMSTLSSQLDAGSRDGRSSSDTSSEVSTVELLHLQQQQALQAARQLLLQQQTSGLKSPKNNEKQRPLQVPVSMAMMTPQVITPQQMQQILQQQVLSPQQLQALLQQQQAVMLQQQQLQEFYKKQQEQLHLQLLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQPQPHPGKQAKEQQQLAAQQLVFQQQLLQMQQLQQQQHLLNLQRQGLISIPPSQSALPVQSLPQAGLSPAEIQQLWKEVTGVHSMEDNGIKHGGLDLTTNISSSTTSTTTSKASPPITHHSLLNGQASVLSARRDSSSHEETGASHTLYGHGVCKWPGCENICEDFGQFLKHLNNEHALDDRSTAQCRVQMQVVQQLEIQLSKERERLQAMMTHLHMRPSEPKPSPKPLNLVSTVTMSKNMLETSPQSLPQTPTTPTAPVTPLAQGPSVITPASVPNVGAIRRRHSDKYNIPMSSEIAPNYEFYKNADVRPPFTYATLIRQAIMESSDRQLTLNEIYSWFTRTFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEAEYQKRRSQKITASPTLVKNIPTSLGYGAALNASLQAALAESSLPLLSNTGLLNNASTGLLQAVHEDLNGSLDHIDSNGNSSAGCSPQPHIHSIHVKEEPLIADDEDCPMSLVTTANHSPELEEDRELEEEPLSEDLE

Annotated regions:
phrase: RPPFTYATLIRQAIMESSDRQLTLNEIYSWFTRTFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEAEY
type: DOMAIN
name: Fork_head_dom
description: Fork head domain

phrase: LYGHGVCKWPGCENICEDFGQFLKHLNNEHALDDRSTAQCRVQMQVVQQLEIQLSKERERLQAMMTHL
type: DOMAIN
name: FOXP-CC
description: FOXP, coiled-coil domain

phrase: RPPFTYATLIRQAIMESSDRQLTLNEIYSWFTRTFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDE
type: DOMAIN
name: Fork_head_dom
description: Fork head domain

phrase: WKNAVR
type: CONSERVED_SITE
name: TF_fork_head_CS_2
description: Fork head domain conserved site 2

phrase: DVRPPFTYATLIRQAIMESSDRQLTLNEIYSWFTRTFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEAEYQKRRSQ
type: DOMAIN
name: Fork_head_dom
description: Fork head domain

phrase: RPPFTYATLIRQA
type: DOMAIN
name: Fork_head_dom
description: Fork head domain

phrase: LTLNEIYSWFTRTFAYF
type: DOMAIN
name: Fork_head_dom
description: Fork head domain

phrase: WKNAVRHNLSLHKCFVR
type: DOMAIN
name: Fork_head_dom
description: Fork head domain

phrase: VRPPFTYATLIRQAIMESSDRQLTLNEIYSWFTRTFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEAEYQKR
type: DOMAIN
name: FH_FOXP1_P2
description: Forkhead box protein P1/P2, forkhead domain
Protein sequence:
MNIVGEYEYSSKDMLGHGAFAVVYKGRHRKKHMPVAIKCITKKGQLKTQNLLGKEIKILKELTELHHENVVALLDCKESQDCVSLVMEYCNGGDLADYLSVKGTLSEDTVRLFLVQLAGAMKALYTKGIVHRDLKPQNILLSHNYGKTLPAPSKITLKIADFGFARFLNEGAMAATLCGSPMYMAPEVIMSLQYDSKADLWSLGTIVYQCLTGKAPFYAQTPNELKSYYEQNANLAPKIPSGVSPDLRDLLLCLLRRNSKDRISYESFFVHRFLQGKKAAVSPGEPSQAANLRRRVSKSGVLPVDMPPLGGTPPAKAKSPLQQQLEQELKLVKLAEQQQKEREEQEAQEDENTVSVVANPAICATITNVGVLCDSENNSGSCSSHEDSDDFVLVPKNLPEDQRQGLAQVQAQPASGGQRPQQQQNQSSPPRPSSLPISEPKPVPAPARRQVARPGPLTVATLGGQQIPRSQPISVKQPRPDQRKSSVSSDINSISPPAVQFAIGTPPTRMRSASGGSLSETPPPHAPSTWQVSPGHSQSPLRRSGNSSPVLPSAALTKLPTLGSPTMLVAPGSLGSIGSAGSGSENNNQHHMLGPRAFTLPELGATGGLHSLLDTGAGGGGEPHAFQAPELSEETLMDREHNETLSKLNFVLALTDCIQEVADSRCAPLSTFMVAGSQSAAQAASADAQQIPPHAPEHCKRAERLVLLVRGLQLLSSGMNLASQQLSNGQLKPSSNVKNALLTMNAKYRSMLFESKRLNGSGLLQKAN

Annotated regions:
phrase: YSSKDMLGHGAFAVVYKGRHRKKHMPVAIKCITKKGQLKTQNLLGKEIKILKELTELHHENVVALLDCKESQDCVSLVMEYCNGGDLADYLSVKGTLSEDTVRLFLVQLAGAMKALYTKGIVHRDLKPQNILLSHNYGKTLPAPSKITLKIADFGFARFLNEGAMAATLCGSPMYMAPEVIMSLQYDSKADLWSLGTIVYQCLTGKAPFYAQTPNELKSYYEQNANLAPKIPSGVSPDLRDLLLCLLRRNSKDRISYESFFVHRF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: YSSKDMLGHGAFAVVYKGRHRKKHMPVAIKCITKKGQLKTQNLLGKEIKILKELTELHHENVVALLDCKESQDCVSLVMEYCNGGDLADYLSVKGTLSEDTVRLFLVQLAGAMKALYTKGIVHRDLKPQNILLSHNYGKTLPAPSKITLKIADFGFARFLNEGAMAATLCGSPMYMAPEVIMSLQYDSKADLWSLGTIVYQCLTGKAPFYAQTPNELKSYYEQNANLAPKIPSGVSPDLRDLLLCLLRRNSKDRISYESFFVHRF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: YSSKDMLGHGAFAVVYKGRHRKKHMPVAIKCITKKGQLKTQNLLGKEIKILKELTELHHENVVALLDCKESQDCVSLVMEYCNGGDLADYLSVKGTLSEDTVRLFLVQLAGAMKALYTKGIVHRDLKPQNILLSHNYGKTLPAPSKITLKIADFGFARFLNEGAMAATLCGSPMYMAPEVIMSLQYDSKADLWSLGTIVYQCLTGKAPFYAQTPNELKSYYEQNANLAPKIPSGVSPDLRDLLLCLLRRNSKDRISYESFFVHR
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: IVHRDLKPQNIL
type: ACTIVE_SITE
name: Ser/Thr_kinase_AS
description: Serine/threonine-protein kinase, active site

phrase: LGHGAFAVVYKGRHRKKHMPVAI
type: BINDING_SITE
name: Protein_kinase_ATP_BS
description: Protein kinase, ATP binding site
Protein sequence:
MSKSDYIELEGFVKEKLPNTTFMVELENGHCILAHISGKIRKHYIRILPGDKVTVEMTPYDLTKGRITFRHK

Annotated regions:
phrase: SDYIELEGFVKEKLPNTTFMVELENGHCILAHISGKIRKHYIRILPGDKVTVEMTPYDLTKGRITFRH
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: IELEGFVKEKLPNTTFMVELENGHCILAHISGKIRKHYIRILPGDKVTVEMTPYDLTKGRITF
type: DOMAIN
name: RNA-binding_domain_S1_IF1
description: RNA-binding domain, S1, IF1 type

phrase: MSKSDYIELEGFVKEKLPNTTFMVELENGHCILAHISGKIRKHYIRILPGDKVTVEMTPYDLTKGRITFRH
type: DOMAIN
name: RNA-binding_domain_S1_IF1
description: RNA-binding domain, S1, IF1 type
Protein sequence:
MSTLPSGSVSWYKIFQRGQNYMKAWPAEKSLAPMFPEHRVVRATRFGVRFMPAVAVFTLTWQIALGGQLGPAVATAIFACSLPMQGLWWLGKRSITPLPPSLLTCFHEVRQKLNEAGQSLAPVEGVPTYQMLVEVLKRAFKLLDKAFLDDL

Annotated regions:
Protein sequence:
MKNKLHRVGRCTASSSRWLYRHVNDPFVKKAKAEQYRSRAAYKLLEIDEKFNLIRKGFVVLELGSAPGGWSQVIADILNGTGRLIAVDLADMDPISGVEVVKLDIELQRKELYEYISGVELDVIVSDLAPSASGSRVTDSISSIRLAELVLHYAKNSLKKFGTVVTKILRGSEDEYRFVNSLRKQFKKIEYFKPDASRKASREIYLILLGKLS

Annotated regions:
phrase: YRSRAAYKLLEIDEKFNLIRKGFVVLELGSAPGGWSQVIADILNGTGRLIAVDLADMDPISGVEVVKLDIELQRKELYEYISGVELDVIVSDLAPSASGSRVTDSISSIRLAELVLHYAKNSLKKFGTVVTKILRGSEDEYRFVNSLRKQFKKIEYFKPDASRKASREIYLILLG
type: DOMAIN
name: RNA_MeTrfase_FtsJ_dom
description: Ribosomal RNA methyltransferase, FtsJ domain
Protein sequence:
MIPDFAAGRLLVAGDVMLDRYWSGPTSRISPEAPVPVVRITGEDARAGGAANVALNIAALGARVRLLGVVGRDESAERLRAAVAAAHVEPDFEVTPDRPTVTKLRVLSRNQQLIRLDFEEPATHVGAFDFNVWRARFRSALANAQTVVLSDYGKGTLADPAALIADARAAACPLLVDPKGTDWRAYTGATLITPNLAELEAVVGPCQDDAAVVAKGTRLMRDLSLEALLVTRSERGMTLLVPGQPPLHLPTQAREVYDVTGAGDTVIGVLAAGLATGLDFAQAAHYANLAAGVVVGKLGTATASPAELSRAVRRQHEDDTGVLGEEELLERVAEARRNGQVIVMTNGCFDLLHVGHVRYLEAARKRGDVLIVAVNTDASVKRLKGDARPINIERDRMRVLAALKSVDWVVPFAEDTPARLIERVLPDVLVKGGDYTPEQVVGHDIVQAHGGRVEVLDFYPGYSTTGTIEKTRGG

Annotated regions:
phrase: MTNGCFDLLHVGHVRYLEAARKRGDVLIVAVNTDASVKRLKGDARPINIERDRMRVLAALKSVDWVVPFAEDTPARLIERVLPDVLVKGGDYT
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: LVAGDVMLDRYWSGPTSRISPEAPVPVVRITGEDARAGGAANVALNIAALGARVRLLGVVGRDESAERLRAAVAAAHVEPDFEVTPDRPTVTKLRVLSRNQQLIRLDFEEPATHVGAFDFNVWRARFRSALANAQTVVLSDYGKGTLADPAALIADARAAACPLLVDPKGTDWRAYTGATLITPNLAELEAVVGPCQDDAAVVAKGTRLMRDLSLEALLVTRSERGMTLLVPGQPPLHLPTQAREVYDVTGAGDTVIGVLAAGLATGLDFAQAAHYANLAAGVVVGKLGTATAS
type: DOMAIN
name: PfkB_dom
description: Carbohydrate kinase PfkB

phrase: IVMTNGCFDLLHVGHVRYLEAARKRGDVLIVAVNTDASVKRLKGDARPINIERDRMRVLAALKSVD
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: PDFAAGRLLVAGDVMLDRYWSGPTSRISPEAPVPVVRITGEDARAGGAANVALNIAALGARVRLLGVVGRDESAERLRAAVAAAHVEPDFEVTPDRPTVTKLRVLSRNQQLIRLDFEEPATHVGAFDFNVWRARFRSALANAQTVVLSDYGKGTLADPAALIADARAAACPLLVDPKGTDWRAYTGATLITPNLAELEAVVGPCQDDAAVVAKGTRLMRDLSLEALLVTRSERGMTLLVPGQPPLHLPTQAREVYDVTGAGDTVIGVLAAGLATGLDFAQAAHYANLAAGVVVGKLGTATASPAELSRA
type: DOMAIN
name: RfaE_dom_I
description: RfaE bifunctional protein, domain I

phrase: RLLVAGDVMLDRYWSGPTSRISPEAPVPVVRITGEDARAGGAANVALNIAALGARVRLLGVVGRDESAERLRAAVAAAHVEPDFEVTPDRPTVTKLRVLSRNQQLIRLDFEEPATHVGAFDFNVWRARFRSALANAQTVVLSDYGKGTLADPAALIADARAAACPLLVDPKGTDWRAYTGATLITPNLAELEAVVGPCQDDAAVVAKGTRLMRDLSLEALLVTRSERGMTLLVPGQPPLHLPTQAREVYDVTGAGDTVIGVLAAGLATGLDFAQAAHYANLAAGVVVGKLGTATASPAE
type: DOMAIN
name: RfaE_dom_I
description: RfaE bifunctional protein, domain I

phrase: AGGAANVALNIAALGARVRLLGVV
type: CONSERVED_SITE
name: Carboh/pur_kinase_PfkB_CS
description: Carbohydrate/purine kinase, PfkB, conserved site

phrase: VAEARRNGQVIVMTNGCFDLLHVGHVRYLEAARKRGDVLIVAVNTDASVKRLKGDARPINIERDRMRVLAALKSVDWVVPFAEDTPARLIERVLPDVLVKGGDYTPEQVVGHDIVQAHGGRVEVLDFYPGYSTTGTIEK
type: DOMAIN
name: RfaE_dom_II
description: RfaE bifunctional protein, domain II
Protein sequence:
MTNIRKTHPLLKMVNHSLIDLPAPSNISAWWNFGSLLGLCLIIQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGASMFFVCLYMHVGRGIYYGSYTYLETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALVMIHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGFLLLTLLLLLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILILAIFPLLHISKQRSMMFRPISQVLFWILVADLLTLTWIGGQPVEHPFITIGQVASILYFSIILILLPLASLVENKILKW

Annotated regions:
phrase: PLLKMVNHSLIDLPAPSNISAWWNFGSLLGLCLIIQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGASMFFVCLYMHVGRGIYYGSYTYLETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALVMIHLLFLHETGS
type: DOMAIN
name: Cytochrome_b_N_euk/bac
description: Cytochrome b/b6, N-terminal domain, eukaryotic/bacterial

phrase: NPSGIPSDSDKIPFHPYYTIKDILGFLLLTLLLLLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILILAIFPLLHISKQRSMMFRPISQVLFWILVADLLTLTWIGGQPVEHPFITIGQV
type: DOMAIN
name: Cytochrome_b_C_euk/bac
description: Cytochrome b/b6, C-terminal domain, eukaryotic/bacterial

phrase: MTNIRKTHPLLKMVNHSLIDLPAPSNISAWWNFGSLLGLCLIIQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGASMFFVCLYMHVGRGIYYGSYTYLETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALVMIHLLFLHETGSNNP
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILILAIFPLLHISKQRSMMFRPISQVLFWILVADLLTLTWIGGQPVEHPFITIGQVASILY
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: IDLPAPSNISAWWNFGSLLGLCLIIQILTGLFLAMHYTSDTLTAFSSVTHICRDVNYGWLIRYLHANGASMFFVCLYMHVGRGIYYGSYTYLETWNIGIILLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALVMIHLLFLHET
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: GIPSDSDKIPFHPYYTIKDILGFLLLTLLLLLLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILILAIFPLLHISKQRSMMFRPISQVLFWILVADLLTLTWIGGQPVEHPFITIGQVASILYFSIILILLPLASLVENKILK
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal
Protein sequence:
MQQNTNVDPQEIAKFERMAETWWDLNGEFKPLHLLNPLRLNYIDQTAGGIFGKKVLDVGCGGGILSESMARIGAIVDGLDMGEEPLEVARLHALETGVSINYVKNTAEAHREDHREYYDVVTCMEMLEHVPDPQSVIQACCDMVKPGGFVFFSTINRNVRSFVETIIGAEYLLKMLPIGTHDHNKFIKPSELIDLVDNTELICKDALGITYNPLTGIFKYTSKVDVNYMIATQKVD

Annotated regions:
Protein sequence:
MEWLDILESHGQALLGPTAWLVLWTIVKIVVIAVPIILCVAYLTYWERKMIGWMHVRLGPTRVGFRGLLQPFADVFKLLTKEVVVPTQANKILFVVAPVVTLMPALAAWAVVPFGPEVVLANVNAGLLYVMAITSIGVYGVIVAGWASNSKYAFLGALRASAQMVSYELAIGFVLVTVLLVSGSLNMSEIVLGQTRGWFAEHGLTFLSWNWLPLLPLFVIYVISAVAETNRHPFDVVEGESEIVAGHMVEYSGMAFALFFLGEYANMILLSCMASIMFLGGWTSPIDIAPLTWIPGWIWLGIKTFCVVSLFVWFRASFPRYRYDQIMRLGWKIFIPLTGVWLVVVAIWMQTPWNIWR

Annotated regions:
phrase: PFDVVEGESEIVA
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_su1_CS
description: NADH:ubiquinone oxidoreductase, subunit 1, conserved site