nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSHQEGSTGGLPDLVTESLFSSPEEQSGVAAVTAASSDIEMAATEPSTGDGGDTRDGGFLNDASTENQNTDSESSSEDVELESMGEGLFGYPLVGEETEREEEEEEMEEEGEEEEQPRMCPRCGGTNHDQCLLDEDQALEEWISSETSALPRSRWQVLTALRQRQLGSSARFVYEACGARTFVQRFRLQYLLGSHAGSVSTIHFNQRGTRLASSGDDLRVIVWDWVRQKPVLNFESGHDINVIQAKFFPNCGDSTLAMCGHDGQVRVAELINASYCENTKRVAKHRGPAHELALEPDSPYKFLTSGEDAVVFTIDLRQDRPASKVVVTRENDKKVGLYTISMNPANIYQFAVGGHDQFVRIYDQRRIDKKENNGVLKKFTPHHLVYCDFPTNITCVVYSHDGTELLASYNDEDIYLFNSSLSDGAQYVKRYKGHRNNDTIKCVNFYGPRSEFVVSGSDCGHVFFWEKSSSQIIQFMEGDRGDIVNCLEPHPYLPVLATSGLDQHVRIWTPTAKTATELTGLKDVIKKNKQERDEDNLNYTDSFDNRMLRFFVRHLLQRAHQPGWRDHGAEFPDEEELDESSSTSDTSEEEGQDRVQCIPS

Annotated regions:
phrase: GAQYVKRYKGHRNNDTIKCVNFYGPRSEFVVSGSDCGHVFFW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: NTKRVAKHRGPAHELALEPDSPYKFLTSGEDAVVFTI
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: RQKPVLNFESGHDINVIQAKFFPNCGDSTLAMCGHDGQVRVA
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: NNGVLKKFTPHHLVYCDFPTNITCVVYSHDGTELLASYNDEDIYLF
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: RFRLQYLLGSHAGSVSTIHFNQRGTRLASSGDDLRVIVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: ASKVVVTRENDKKVGLYTISMNPANIYQFAVGGHDQFVRIY
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: SSQIIQFMEGDRGDIVNCLEPHPYLPVLATSGLDQHVRIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: YVKRYKGHRNNDTIKCVNFYGPRSEFVVSGSDCGHVFF
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: IQFMEGDRGDIVNCLEPHPYLPVLATSGLDQHVRI
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: YLLGSHAGSVSTIHFNQRGTRLASSGDDLRVIVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LGSHAGSVSTIHFNQRGTRLASSGDDLRVIVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat
Protein sequence:
MTRTTGAAPDRAAPAAGETPGGGGRAQVYLHAGQIAVAAEPTAIVTVLGSCVAVCLHDPVARVGGMNHFLLPLHVEREQSARFGTVAVPQLVEAVVRAGARRASLVAKVFGGASVIGAFRGARNLGDENVQLALRLLDEARIPVLDRDVGGARGRKLIFHVDDGAAWVRQL

Annotated regions:
Protein sequence:
MANAKEIRGQIKSVKNTRKITRAMEMVAASKMRRAQERMRAARPYAEKIREVLGHLAQAHPEYEHPLMQVRPVKKAGFLVVTTDRGLCGGLNVNVLRNVVQKMRELHEEGVESNLAVVGNKGLGFLRRHGAHLVAELNGLGDSPHLGDMIGPIRAMADAYAKGEVDVVYLVSSRFVNTMLQRATVEQLLPVEKPTASAEQRAELWDYIYEPEARPVLDRLMQRYVESVVYQAVIEHLACEQSARMVAMKSASDNAKRMVDDLQLAYNKARQAAITQEIAEISAGAAAV

Annotated regions:
phrase: ITQEIAEISAGAA
type: CONSERVED_SITE
name: ATP_synth_F1_gsu_CS
description: ATP synthase, F1 complex, gamma subunit conserved site
Protein sequence:
MNVPAALRYTKDHEWIQLLDDGATALVGITDFAQSELGDIVFVELKPAGTALKEHEIFGTVEAVKTVADLFAPVAGEILEVNAGLDSAETVNQDPYGSGWMVKMKLADPASVANLLDAAAYRELIGG

Annotated regions:
phrase: TALVGITDFAQSELGDIVFVELKPAGTALKEHEIFGTVEAVKTVADLFAPVAGEILEVNAGLDSAETVNQDPYGSGWMVKM
type: DOMAIN
name: Biotin_lipoyl
description: Biotin/lipoyl attachment

phrase: GTALKEHEIFGTVEAVKTVADLFAPVAGE
type: BINDING_SITE
name: 2-oxoA_DH_lipoyl-BS
description: 2-oxo acid dehydrogenase, lipoyl-binding site
Protein sequence:
MKITKLEKKKRLYLMELDNGDKCYITEDTIVRFMLSRDKVISEEELKEIQDFAQFSYGKNLALYHLSFKARTEKEVREYLKKYDIDENIVSQVIANLKEDKWINDGQYAYAIINTNQLSGDKGPYVLTQKLAQKGISKSTIEENLKEFDFSEVAQRVANKLLKKYEGKLPARALQDKIIQNLTNKGFSYSDAKIAFDDLDSQVEQETTQELIFKELDKQYTKYARKYEGYELKQRLTQVLARKGYDFSDIASALREYL

Annotated regions:
phrase: QELIFKELDKQYTKYARKYEGYELKQRLTQVLARKGYDFSDIASA
type: DOMAIN
name: RecX_HTH_3rd
description: RecX, third three-helical domain

phrase: NDGQYAYAIINTNQLSGDKGPYVLTQKLAQKGISKSTIE
type: DOMAIN
name: RecX_HTH_2nd
description: RecX, second three-helical domain

phrase: KNLALYHLSFKARTEKEVREYLKKYDIDENIVSQVI
type: DOMAIN
name: RecX_HTH_1st
description: RecX, first three-helical domain
Protein sequence:
MSTKPELKRFEQFGEMMVQLYERYLPTAFDESLTLLEKMNKIIHYLNEIGKVTNELIEEWNKVMEWILNDGLEDLVKETLERWYEEGKFADLVIQVIDELKQFGVSVKTYGAKGDGVTDDIRAFEKAIESGFPVYVPYGTFMVSRGIKLPSNTVLTGAGKRNAVIKFMDSVGRGESLMYNQNVTTGNENIFLSSFTLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDCTLHGIDITCGGLDYPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYGGIEIKAHGDAPAAYNISINGHMSVEDVRSYNFRHIGHHAATDPQSVSAKNIVASNLVSIRPNNKRGFQDNATPRVLAVSAYYGVVINGLTGYTDDPNLLTETVVSVQFRARNCSLNGVGLTGFSNSDNGIYVIGGSRGGDAVNISNVTLNNSGRYGVSIGSGIENVSITNISGIGDGINSPVALVSTINSNPEISGLSSIGYPTAARVAGTDYNDGLTLFNGAFRASTTSSGKIHSEGFIMGSTSGCEASVSKSGVLTSSSSKTSSERSLIAGSSTSEAKGTYNTILGSLGAVADEQFAALISASQSRASGNHNLILSSYGINTTGSYKVNGGFEKINWELDSLNGRIKARDTVTGGNTWSDFAEYFESLDGQVIETGYLVTLEKGKIRKAEKGEKIIGVISETAGFVLGESSFEWQGAVLKNEFGGIIYEEVTTEDGVKFKRPLPSPDFDPNKNYIPRSQRREWHVVGLLGQIAVRIDETVKQGHGIDAVGGVATDGDNFIVQEITTPYTKEKGYGVAIVLVK

Annotated regions:
phrase: SRHVVLSNNRSKGCYGGIEIK
type: REPEAT
name: PbH1
description: Parallel beta-helix repeat

phrase: ARNCSLNGVGLTGFSNSDNGIYVI
type: REPEAT
name: PbH1
description: Parallel beta-helix repeat

phrase: CHNVYIRDIEAVDCTLHGIDIT
type: REPEAT
name: PbH1
description: Parallel beta-helix repeat

phrase: GDAVNISNVTLNNSGRYGVSIG
type: REPEAT
name: PbH1
description: Parallel beta-helix repeat

phrase: SENIWIENCEATGFGDDGITTH
type: REPEAT
name: PbH1
description: Parallel beta-helix repeat

phrase: SQYINILNCYSHDPRLTANCNGFEID
type: REPEAT
name: PbH1
description: Parallel beta-helix repeat

phrase: VSVKTYGAKGDGVTDDIRAFEKAIESGFPVYVPYGTFMVSRGIKLPSNTVLTGAGKRNAVIKFMDSVGRGESLMYNQNVTTGNENIFLSSFTLDGNNKRLGQGISGIGGSRESNLSIRACHNVYIRDIEAVDCTLHGIDITCGGLDYPYLGDGTTAPNPSENIWIENCEATGFGDDGITTHHSQYINILNCYSHDPRLTANCNGFEIDDGSRHVVLSNNRSKGCYGGI
type: DOMAIN
name: RHGA/B-epi-like_pectate_lyase
description: Rhamnogalacturonase A/B/Epimerase-like, pectate lyase domain

phrase: HNLILSSYGINTTGSYKVNGGFEKINWELDSLNGRIKARDTVTGGNTWSDFAEYFESLDGQVIETGYLVTLEKGKIRKAEKGEKIIGVISETAGFVLGESSFEWQGAVLKNEFGGIIYEEVTTEDGVKFKRPLPSPDFDPNKNYIPRSQRREWHVVGLLGQIAVRIDETVKQGHGIDAVGGVATDGDNFIVQEITTPYTKEKGYGVAIVLV
type: DOMAIN
name: Peptidase_G2
description: Peptidase G2, IMC autoproteolytic cleavage domain
Protein sequence:
MNEPISNSSKKTENTTQGVRKIRTMIEGFDEITHGGLPIGRTTLVSGTSGTGKTLLAVQFLYHGIKYFDYPGLFVTFEESPTDIIQNAYSFGWDLQEIVDEGKLFILDASPDPDGQEVVGSFDLSALIERIQYAINKYKAQLVSIDSVTAVFQQYDAASVVRREIFRLVARLKLLGVTSIMTTERIEEYGPIARYGVEEFVSDNVVVLRNVLEGERRRRTAEILKLRGTTHMKGEYPFTITNDGINIFPLGAMRLTQRSSNARISSGVKTLDEMCGGGFFKDSIILATGATGTGKTLLVSKFLEEGCRQGERAILFAYEESRAQLSRNAFSWGIDFEEMERKGLLKLLCSYPESAGLEDHLQIIKSEISEFKPSRIAIDSLSALARGVTNNAFRQFVIGVTGYAKQEEITGFFTNTTDQFMGAHSITESHISTITDTIIMLQYVEIRGEMSRAINVFKMRGSWHDKGIREYSINESGPTIQDSFRNYERIISGSPTRITVDEKNELSRIVRGVKDKTLDEE

Annotated regions:
phrase: ARISSGVKTLDEMCGGGFFKDSIILATGATGTGKTLLVSKFLEEGCRQGERAILFAYEESRAQLSRNAFSWGIDFEEMERKGLLKLLCSYPESAGLEDHLQIIKSEISEFKPSRIAIDSLSALARGVTNNAFRQFVIGVTGYAKQEEITGFFTNTTDQFMGAHSITESHISTITDTIIMLQYVEIRGEMSRAINVFKMRGSWHDKGIREYSINESGPTIQDSFRNYERIISG
type: DOMAIN
name: KaiC_dom
description: KaiC domain

phrase: IRTMIEGFDEITHGGLPIGRTTLVSGTSGTGKTLLAVQFLYHGIKYFDYPGLFVTFEESPTDIIQNAYSFGWDLQEIVDEGKLFILDASPDPDGQEVVGSFDLSALIERIQYAINKYKAQLVSIDSVTAVFQQYDAASVVRREIFRLVARLKLLGVTSIMTTERIEEYGPIARYGVEEFVSDNVVVLRNVLEGERRRRTAEILKLRGTTHMKGEYPFTITNDGINI
type: DOMAIN
name: KaiC_N
description: Circadian clock protein kinase KaiC, N-terminal domain

phrase: ISSGVKTLDEMCGGGFFKDSIILATGATGTGKTLLVSKFLEEGCRQGERAILFAYEESRAQLSRNAFSWGIDFEEMERKGLLKLLCSYPESAGLEDHLQIIKSEISEFKPSRIAIDSLSALARGVTNNAFRQFVIGVTGYAKQEEITGFFTNTTDQFMGAHSITESHISTITDTIIMLQYVEIRGEMSRAINVFKMRGSWHDKGIREYSINESGPT
type: DOMAIN
name: KaiC_C
description: Circadian clock protein kinase KaiC, C-terminal domain

phrase: IRTMIEGFDEITHGGLPIGRTTLVSGTSGTGKTLLAVQFLYHGIKYFDYPGLFVTFEESPTDIIQNAYSFGWDLQEIVDEGKLFILDASPDPDGQEVVGSFDLSALIERIQYAINKYKAQLVSIDSVTAVFQQYDAASVVRREIFRLVARLKLLGVTSIMTTERIEEYGPIARYGVEEFVSDNVVVLRNVLEGERRRRTAEILKLRGTTHMKGEYPFTITNDGINIFP
type: DOMAIN
name: KaiC-like_dom
description: KaiC-like domain

phrase: SSGVKTLDEMCGGGFFKDSIILATGATGTGKTLLVSKFLEEGCRQGERAILFAYEESRAQLSRNAFSWGIDFEEMERKGLLKLLCSYPESAGLEDHLQIIKSEISEFKPSRIAIDSLSALARGVTNNAFRQFVIGVTGYAKQEEITGFFTNTTDQFMGAHSITESHISTITDTIIMLQYVEIRGEMSRAINVFKMRGSWHDKGIREYSINESGPTI
type: DOMAIN
name: KaiC-like_dom
description: KaiC-like domain

phrase: RKIRTMIEGFDEITHGGLPIGRTTLVSGTSGTGKTLLAVQFLYHGIKYFDYPGLFVTFEESPTDIIQNAYSFGWDLQEIVDEGKLFILDASPDPDGQEVVGSFDLSALIERIQYAINKYKAQLVSIDSVTAVFQQYDAASVVRREIFRLVARLKLLGVTSIMTTERIEEYGPIARYGVEEFVSDNVVVLRNVLEGERRRRTAEILKLRGTTHMKGEYPFTITNDGINIFPLGAMRLTQRSS
type: DOMAIN
name: KaiC_dom
description: KaiC domain
Protein sequence:
MRILLTNDDGIHAEGLAALERIARTLSDDVWIVAPETDQSGLAHSLSLSEPLRLRKISDKHFALRGTPTDCVIMGIRQVMDIKPDLVLSGVNSGSNVADDVTYSGTIAGAIEGTMQGVRSFALSQAYLYEDGARIVPWEVCETHAPALLEKLMDLDLPEGTFLNLNFPNCRPGEVDGAEVTMQGKLAFNLQVDARSDGRGFPYYWLKFGERAGAFIEGTDIHALKHNKISVTPLKLDLTDYSVTDRVARALGYGAQV

Annotated regions:
phrase: MRILLTNDDGIHAEGLAALERIARTLSDDVWIVAPETDQSGLAHSLSLSEPLRLRKISDKHFALRGTPTDCVIMGIRQVMDIKPDLVLSGVNSGSNVADDVTYSGTIAGAIEGTMQGVRSFALSQAYLYEDGARIVPWEVCETHAPALLEKLMDLDLPEGTFLNLNFPNCRPGEVDGAEVTMQGKLAFNLQVDARSDGRGFPYYWLKFGERAGAFIEGTDIHALKHNKISVTPLKLDL
type: DOMAIN
name: SurE-like_Pase/nucleotidase
description: Survival protein SurE-like phosphatase/nucleotidase

phrase: ILLTNDDGIHAEGLAALERIARTLSDDVWIVAPETDQSGLAHSLSLSEPLRLRKISDKHFALRGTPTDCVIMGIRQVMDIKPDLVLSGVNSGSNVADDVTYSGTIAGAIEGTMQGVRSFALSQAYLYEDGARIVPWEVCETHAPALLEKLMDLDLPEGTFLNLNFPNCRPGEVDGAEVTMQG
type: DOMAIN
name: SurE-like_Pase/nucleotidase
description: Survival protein SurE-like phosphatase/nucleotidase
Protein sequence:
MVQAKAWLLAKHFDGFPTESNFELKLEQLPEPKDGEVLLEAVFLSVDPYMRPFSRVRMNEGEVMIGTQVAKVIQSKNAEFAVGSHVVGRCGWRTHTVCDTTGLTPVMVDWPEDVSLSLALGAIGMPGLTALYGLEEVLGLQAGETLLVNAAAGAVGSVVGQIAKIKGCRVVGSAGSDAKVAFLKELGFDRTINYKTVGSLDQALREAAPEGYDCYFENVGGQFSSVAIHQMNNYGRIAVCGCISLYNDTTPQTGPYPHLTMIFKQLKMEGFMQSRWEHKHPESLKRLMAWMKEGKLQCREHITEGFDNMPAAFMGLLQGENTGKAIIKV

Annotated regions:
phrase: TESNFELKLEQLPEPKDGEVLLEAVFLSVDPYMRPFSRVRMNEGEVMIGTQVAKVIQSKNAEFAVGSHVVGRCGWRTHTVCDTTGLTPVMVDWPEDVSLSLALGAIGMPGLTALYGLEEVLGLQAGETLLVNAAAGAVGSVVGQIAKIKGCRVVGSAGSDAKVAFLKELGFDRTINYKTVGSLDQALREAAPEGYDCYFENVGGQFSSVAIHQMNNYGRIAVCGCISLYNDTTPQTGPYPHLTMIFKQLKMEGFMQSRWEHKHPESLKRLMAWMKEGKLQCREHITEGFDNMPAAFMGLLQGENTGKAI
type: DOMAIN
name: PKS_ER
description: Polyketide synthase, enoylreductase domain

phrase: KAWLLAKHFDGFPTESNFELKLEQLPEPKDGEVLLEAVFLSVDPYMRPFSRVRMNEGEVMIGTQVAKVIQSKNAEFAVGSHVVGRCGWRTHTVCDTTGLTP
type: DOMAIN
name: ADH_N_2
description: Oxidoreductase, N-terminal domain

phrase: AVGSVVGQIAKIKGCRVVGSAGSDAKVAFLKELGFDRTINYKTVGSLDQALREAAPEGYDCYFENVGGQFSSVAIHQMNNYGRIAVCGCISLYNDTTPQTGPYPHLTMIFKQLKMEGFMQSRWEHKHPESLKRLMAW
type: DOMAIN
name: ADH-like_C
description: Alcohol dehydrogenase-like, C-terminal
Protein sequence:
MSVDNESLYLYNLTIKHPSSCIASIVGQFLGNKKSQEIILANSTSIELWKADSNTGKLEKIYQQASFGIIQGIDKIRLVGTQKDYVVITSDSGKLVVLEFDIEKLQFVPLFQEPHSKNGLRRTSPGEYLCVDPHNRAILIGAIEKNKLVYKVQSNDEGKLELSSPLETFSKHTLTLQICAMDTGFENPMFAAIECDYNARQQDNGEEEDAGEASLLLNYYELDQGLNHVVKHKSNEKIPGSSSHLIPLPDFIGGLLVCSKSTIIYAHPSKDKLYLPIPIRSNTNETLIVNHVIHRLKKNNFFILVQSQLGDCFKITIDHDEVNESIENINITYFDTIPLSQSLNIFKSGFLFANVATNNKLFYQFEKLGDDNNNTTLQSCNFSDYNSIFELDISKRSFKVAGLENLALVDIMETLNPITDGALIETLRPEVPDPFKQLTALSSHSYLKTLTHGISTNTVVSSPLPIKPTAIHTTRIFAESANDEYLVISSTLSSQTLVLSIGEVVEEVNDSQFVTNEPTINVQQVGKSSVVQIYSNGIRHIKHTMRNDTIEKKYTDWYPPAGISIIQASTNNEQVIIGLSNREICYFEIDPHDDQLVEYQERLEMSGGSISALAISSSSISKLQRKSSYAIVGCSDETIQAISLKPHNCLEIVTLQALSANSSSIAMVPHGYSTSVHIGMENGLYVRVTIDEITGKLSDTRIQFLGSKPVQLSVIGLPQLQQNGLLAISSRPWIGYYSKGDFKMTPLLNTNISNGASFYSEDIGGEGI

Annotated regions:
phrase: SIVGQFLGNKKSQEIILANSTSIELWKADSNTGKLEKIYQQASFGIIQGIDKIRLVGTQKDYVVITSDSGKLVVLEFDIEKLQFVPLFQEPHSKNGLRRTSPGEYLCVDPHNRAILIGAIEKNKLVYKVQSNDEGKLELSSPLETFSKHTLTLQICAMDTGFENPMFAAIECDYNARQQDNGEEEDAGEASLLLNYYELDQGLNHVVKHKSNEKIPGSSSHLIPLPDFIGGLLVCSKSTIIYAHPSKDKLYLPIPIRSNTNETLIVNHVIHRLKKNNFFILVQSQLGDCFKITIDHDEVNESIENINITYFDTIPLSQSLNIFKSGFLFANVATNNKLFYQFEKLGDDNNNTTL
type: DOMAIN
name: Beta-prop_RSE1/DDB1/CPSF1_1st
description: RSE1/DDB1/CPSF1, first beta-propeller domain
Protein sequence:
MTTYTPMMQQYLQVKEDYKDAFLFFRLGDFYEMFFEDAINASQILEITLTSRDAGAKERIPMCGVPHHSAKNYIETLVQKGYKVAICEQTEDPKQAKGVVKREVVQLITPGTIMEGKTLEGKSNHFIGAAEQLDDTTFGYAYLDLSTGEAVASSIEGDGKALLMQMQAYGIRELIVTDSLQLLLAEHAANAAIVLSVEADEMTMDKAASYVEAVPPALQISCLRLLAYIDKTQMRSLSHIQAFTFNEMKHYLRIDSSSKRNLELIQSIRGGDQKGTLLWLLDDTVTAMGGRKLKQWLHQPLATRSAIESRLAIVTDLLEEYFVRTELQTALKQVYDLERLAGRVAFGNVGGRDLAQLRDSLRQVPAIQQQLMGAGKETLQQIGVALDTCTDVVELLAKAITDNPPITIKEGDVIRDGYHGRLDELRYAARNGKDWIAQLEQEERLKTGIKNLKIGYNRIFGYYIEITKSNIHLADLTRYERKQTLANAERYITQELKEKEALILNAEEESLALEYNLFVEIRDALKEFIPRVQALAASISELDVLLSFASISEKYRFTKPQFHNGRALEIIEGRHPVVEKMLNKQMYVPNDCVLEEQNNMMLITGPNMSGKSTYMRQVALIVVMAQMGCYVPAEKAKLPITDQIFTRIGAADDLAAGQSTFMVEMLESQHAIMHATKNSLMLFDEIGRGTSTYDGMSLAQSMMEYIHDKIGANTLFSTHYHELTALEKDLPRLQNVHVAATEKNGMVVFLHKVKKGAADKSYGIHVAQLAQLPEEILARARVLLENFEAGNEVVAEAQKIAEPPLQMSLFTEEEPMAPAEAEVLKKLEKVNILGTSPMQAMNILYELQQELLNMKK

Annotated regions:
phrase: TPMMQQYLQVKEDYKDAFLFFRLGDFYEMFFEDAINASQILEITLTSRDAGAKERIPMCGVPHHSAKNYIETLVQKGYKVAICEQTEDPKQAKGVVKREVVQLITPGTIME
type: DOMAIN
name: DNA_mismatch_repair_MutS-lik_N
description: DNA mismatch repair protein MutS-like, N-terminal

phrase: AEQLDDTTFGYAYLDLSTGEAVASSIEGDGKALLMQMQAYGIRELIVTDSLQLLLAEHAANAAIVLSVEADEMTMDKAASYVEAVPPALQISCLRLLAYIDKTQMRSLSHI
type: DOMAIN
name: DNA_mmatch_repair_MutS_con_dom
description: DNA mismatch repair protein MutS, connector domain

phrase: GYHGRLDELRYAARNGKDWIAQLEQEERLKTGIKNLKIGYNRIFGYYIEITKSNIHLADLTRYERKQTLANAERYITQELKEKEALILNAEE
type: DOMAIN
name: DNA_mismatch_repair_MutS_clamp
description: DNA mismatch repair protein MutS, clamp

phrase: NNMMLITGPNMSGKSTYMRQVALIVVMAQMGCYVPAEKAKLPITDQIFTRIGAADDLAAGQSTFMVEMLESQHAIMHATKNSLMLFDEIGRGTSTYDGMSLAQSMMEYIHDKIGANTLFSTHYHELTALEKDLPRLQNVHVAATEKNGMVVFLHKVKKGAADKSYGIHVAQLAQLPEEILARARVLL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: SKRNLELIQSIRGGDQKGTLLWLLDDTVTAMGGRKLKQWLHQPLATRSAIESRLAIVTDLLEEYFVRTELQTALKQVYDLERLAGRVAFGNVGGRDLAQLRDSLRQVPAIQQQLMGAGKETLQQIGVALDTCTDVVELLAKAITDNPPITIKEGDVIRDGYHGRLDELRYAARNGKDWIAQLEQEERLKTGIKNLKIGYNRIFGYYIEITKSNIHLADLTRYERKQTLANAERYITQELKEKEALILNAEEESLALEYNLFVEIRDALKEFIPRVQALAASISELDVLLSF
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: MLITGPNMSGKSTYMRQVALIVVMAQMGCYVPAEKAKLPITDQIFTRIGAADDLAAGQSTFMVEMLESQHAIMHATKNSLMLFDEIGRGTSTYDGMSLAQSMMEYIHDKIGANTLFSTHYHELTALEKDLPRLQNVHVAATEKNGMVVFLHKVKKGAADKSYGIHVAQLAQLPEEILARARVLLEN
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: SLMLFDEIGRGTSTYD
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: DQKGTLLWLLDDTVTAMGGRKLKQWLHQPLATRSAIESRLAIVTDLLEEYFVRTELQTALKQVYDLERLAGRVAFGNVGGRDLAQLRDSLRQVPAIQQQLMGAGKETLQQIGVALDTCTDVVELLAKAITDNPPITIKEGDVIRDGYHGRLDELRYAARNGKDWIAQLEQEERLKTGIKNLKIGYNRIFGYYIEITKSNIHLADLTRYERKQTLANAERYITQELKEKEALILNAEEESLALEYNLFVEIRDALKEFIPRVQALAASISELDVLLSFASISEKYRFTKPQFHNGRALEIIEGRHPVVEK
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core
Protein sequence:
MESFVTPQRRSAAEQEPKPTANIENIVATVSLDQTLDLNLIERSILTVEYNPEQFPGLVYRLDSPKVTALIFKSGKMVVTGAKSTRDLIEAVKKIVRNLKKHGIQIYGRPKVQIQNIVASANLNVCVDLERAALTLENSMYEPEQFPGLIHRMDEPRVVLLIFSSGKMVITGAKREEEVYEAVNKIYEKLKKLRAIRPC

Annotated regions:
phrase: YEPEQFPGLIHRMDEPRVVLLIFSSGKMVITGAKREEEVYEAVNKIYEK
type: CONSERVED_SITE
name: TBP_CS
description: TATA-box binding protein, conserved site
Protein sequence:
MENRWQVLIVWQVDRQKVKAWNSLVKYHKYRSRETKDWAYRHHYECINPRISSGVYIPVGMSYVIVTTYWGLMPGEREDQLGHGVSIEWQYKRYKTQIDPETADRMIHLYYFTCFTDSAVRKAILGERVLTKCEYSAGHSQVGTLQLLALRVIVKAKRNKPPLPSVQKLTEDRWXKPQKTRGHRGSHTMNGH

Annotated regions:
Protein sequence:
MSTKTYDAGVKDYALTYWTPDYVPLDSDLLACFKVTPQAKVSREEAAAAVAAESSTGTWTTVWSDLLTDLDYYKGRAYRIEDVPGDKESFYAFIAYPLDLFEEGSIVNVLTSLVGNVFGFKAVRALRLEDIRFPLHYVKTCGGPPNGIQVERDRMDKYGRPFLGATVKPKLGLSAKNYGRAVYEMLRGGLDFTKDDENVNSQPFMRWQNRFEFVSEAVRKAQEETGERKGHYLNVTAPTCEEMFKRAEFAKECGAPIIMHDFLTGGFTANTSLANWCRDNGMLLHIHRAMHAVIDRNPKHGIHFRVLAKCLRLSGGDHLHTGTVVGKLEGDRQSTLGFVDQLRESFIPEDRSRGLFFDQDWGGMPGVMAVASGGIHVWHIPALVTIFGDDSVLQFGGGTQGHPWGNAAGAAANRVATEACVKARNEGVEIEKHAREVLSDAARHSPELAVAMETWKEIKFEFDVVDKLDAA

Annotated regions:
phrase: GLDFTKDD
type: ACTIVE_SITE
name: RuBisCo_large_chain_AS
description: Ribulose bisphosphate carboxylase, large chain, active site

phrase: GIQVERDRMDKYGRPFLGATVKPKLGLSAKNYGRAVYEMLRGGLDFTKDDENVNSQPFMRWQNRFEFVSEAVRKAQEETGERKGHYLNVTAPTCEEMFKRAEFAKECGAPIIMHDFLTGGFTANTSLANWCRDNGMLLHIHRAMHAVIDRNPKHGIHFRVLAKCLRLSGGDHLHTGTVVGKLEGDRQSTLGFVDQLRESFIPEDRSRGLFFDQDWGGMPGVMAVASGGIHVWHIPALVTIFGDDSVLQFGGGTQGHPWGNAAGAAANRVATEACVKARNEGVEIEKHAREVLSDAARHSPELAVAMET
type: DOMAIN
name: RuBisCO_lsu_C
description: Ribulose bisphosphate carboxylase, large subunit, C-terminal

phrase: YWTPDYVPLDSDLLACFKVTPQAKVSREEAAAAVAAESSTGTWTTVWSDLLTDLDYYKGRAYRIEDVPGDKESFYAFIAYPLDLFEEGSIVNVLTSLVGNVFGFKAVRALRLEDIRFPLH
type: DOMAIN
name: RuBisCO_lsu_fd_N
description: Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal
Protein sequence:
MAEKTNRSKKIFRGPLIYIIIAPIVVLLGWSLISGGGAKEIKTQDGLEYLKQGKVESAEIIDGEQRVNLVLSKADKEDGKEVYFYYVTPRGDAVVEAVNNADPKKGFTDDVPQPNAWLSVLGFILPLLLIGLFFWWMLSSMQGGGNKVMQFGKSKAKLVSKETPQVTFADVAGADEAIEELHEIKEFLQEPARFLAVGARIPKGVLLYGPPGTGKTLLARAVAGEAGVPFYSISGSDFVEMFVGVGASRVRDLFEQAKQNSPAIIFVDEIDAVGQRRGQGMGGGHDEREQTLNQLLVEMDGFDVKTNVILIAATNRPDMLDPALLRPGRFDRQIGVDAPDMIGRRQILEVHSKGKPLAENVDLDVVARKTPGFTGADLANVLNEAALLTARSNAQLIDNRALDEAIDRVIAGPQRRTRLMKDKEKLVTAYHEGGHALVAASMNNTDPVTKVTILPRGRALGYTMVIPLEDKYSVSRNELLDQIAYAMGGRVAEEIVFHDPTTGASNDIEKATGTARKMVTEYGMTAELGPVMLGTATGGAYLGDFGQSRDYSEGLAEKVDHEIRAIIENAHNEAWQVLNENRHVLDRLARELLEKETLDHNQLAEIFKDVKRLPPRPQWLSSEGRPVSDLPPVEIPAIAKTDASVEEAVATASATEETNTTDTQGTTTPGASEPAPESDG

Annotated regions:
phrase: NVDLDVVARKTPGFTGADLANVLNEAALLTARSNAQLIDNRAL
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: LMKDKEKLVTAYHEGGHALVAASMNNTDPVTKVTILPRGRALGYTMVIPLEDKYSVSRNELLDQIAYAMGGRVAEEIVFHDPTTGASNDIEKATGTARKMVTEYGMTAELGPVMLGTATGGAYLGDFGQSRDYSEGLAEKVDHEIRAIIENAHNEAWQVLNENRHVLDRLARELLEKETLDHNQLAE
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: IPKGVLLYGPPGTGKTLLARAVAGEAGVPFYSISGSDFVEMFVGVGASRVRDLFEQAKQNSPAIIFVDEIDAVGQRRGQGMGGGHDEREQTLNQLLVEMDGFDVKTNVILIAATNRPDMLDPALLRPGRFDRQIGVDAP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VLLYGPPGTGKTLLARAVAGEAGVPFYSISGSDFVEMFVGVGASRVRDLFEQAKQNSPAIIFVDEIDAVGQRRGQGMGGGHDEREQTLNQLLVEMDGFDVKTNVILIAATNRPDMLDPALLRPGRFDRQIGV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: LIYIIIAPIVVLLGWSLISGGGAKEIKTQDGLEYLKQGKVESAEIIDGEQRVNLVLSKADKEDGKEVYFYYVTPRGDAVVEAVNNADPKKGFTDDVPQ
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular

phrase: VILIAATNRPDMLDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site
Protein sequence:
MARPIDVSQLIAGINKKKGLDENTSGKISKPRFLNKQERSKQERLKENEESLTPTQSDSAKVEIKKVNSRDDSFFNETNDKKRNPSKQNGSKFHFSWNESEDTLSGYDPIVSTRAIDLLWKGKTPKNAAESSYMGKHWTEKSLHEMNERDWRILKEDYAIVTKGGTVENPLRNWEELNIIPRDLLRVIIQELRFPSPTPIQRITIPNVCNMKQYRDFLGVASTGSGKTLAFVIPILIKMSRSPPRPPSLKIIDGPKALILAPTRELVQQIQKETQKVTKIWSKESNYDCKVISIVGGHSLEEISFSLSEGCDILVATPGRLIDSLENHLLVMKQVETLVLDEADKMIDLGFEDQVTNILTKVDINADSAVNRQTLMFTATMTPVIEKIAAGYMQKPVYATIGVETGSEPLIQQVVEYADNDEDKFKKLKPIVAKYDPPIIIFINYKQTADWLAEKFQKETNMKVTILHGSKSQEQREHSLQLFRTNKVQIMIATNVAARGLDIPNVSLVVNFQISKKMDDYIHRIGRTGRAANEGTAVSFVSAAEDESLIRELYKYVRKHDPLNSNIFSEAVKNKYNVGKQLSNEIIY

Annotated regions:
phrase: VLDEADKM
type: CONSERVED_SITE
name: RNA-helicase_DEAD-box_CS
description: ATP-dependent RNA helicase DEAD-box, conserved site

phrase: KFKKLKPIVAKYDPPIIIFINYKQTADWLAEKFQKETNMKVTILHGSKSQEQREHSLQLFRTNKVQIMIATNVAARGLDIPNVSLVVNFQISKKMDDYIHRIGRTGR
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: DWLAEKFQKETNMKVTILHGSKSQEQREHSLQLFRTNKVQIMIATNVAARGLDIPNVSLVVNFQISKKMDDYIHRIGRTGRA
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: RFPSPTPIQRITIPNVCNMKQYRDFLGVASTGSGKTLAFVIPILIKMSRSPPRPPSLKIIDGPKALILAPTRELVQQIQKETQKVTKIWSKESNYDCKVISIVGGHSLEEISFSLSEGCDILVATPGRLIDSLENHLLVMKQVETLVLDEADKMIDLGFEDQVTNILTKVDINADSAVNRQTLMFTATMTPVIEKIAAGYMQKPVYATIGVETGSEPLIQQ
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: TPIQRITIPNVCNMKQYRDFLGVASTGSGKTLAFVIPILIKMSRSPPRPPSLKIIDGPKALILAPTRELVQQIQKETQKVTKIWSKESNYDCKVISIVGGHSLEEISFSLSEGCDILVATPGRLIDSLENHLLVMKQVETLVLDEADKMIDLGFEDQVTNILTKVDINADSAVNRQTLMFTATMTPVIE
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: KLKPIVAKYDPPIIIFINYKQTADWLAEKFQKETNMKVTILHGSKSQEQREHSLQLFRTNKVQIMIATNVAARGLDIPNVSLVVNFQISKKMDDYIHRIGRTGRAANEGTAVSFVSAAEDESLIRELYKYVRKHDPLNSNIFSEAVKNKYNV
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: VCNMKQYRDFLGVASTGSGKTLAFVIPILIKMSRSPPRPPSLKIIDGPKALILAPTRELVQQIQKETQKVTKIWSKESNYDCKVISIVGGHSLEEISFSLSEGCDILVATPGRLIDSLENHLLVMKQVETLVLDEADKMIDLGFEDQVTNILTKVDINADSAVNRQTLMFTATMTPVIEKIAAGYMQKPVY
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain
Protein sequence:
MVETSIDMEEGTLEIGMEYRTVSGVAGPLVILDKVKGPKYQEIVNIRLGDGSTRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTENLIQEDHGEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSLSRLMKSAIGEGMTRKDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVMQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQFYSRDSTS

Annotated regions:
phrase: AIGEGMTRKDHSDVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVMQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDQF
type: DOMAIN
name: ATP-synt_VA_C
description: ATP synthase A/B type, C-terminal domain

phrase: VSGVAGPLVILDKVKGPKYQEIVNIRLGDGSTRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFT
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_N
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain

phrase: GISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTENLIQEDHGEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLHNRQIYPPINVLPSL
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_nucl-bd
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain

phrase: PPINVLPSL
type: ACTIVE_SITE
name: ATPase_a/bsu_AS
description: ATPase, alpha/beta subunit, nucleotide-binding domain, active site
Protein sequence:
MGHIINPISYRLYNIRYWNNNWFSGSLNYSYLINQDILIDRFFRKFLTTHLDSTNAGIIFVNLKIIRSFNNISLYVYIHDSFLDLLFFNLKKNARFLLIKRLFNKKFYKKYRKALRQNKQLKQGLFMLLKKRVILRYSRKLFFLFIKNKILKIYWESFKTLSLFYLKRFSRSSFLSKIFIIGLSKMNVNANIISEFFFIRLTQYYTIWEVLRNINFLFKSLMKKRKLVKGYKITCSGRFSRKQRTTYSWKAFGSLAFSTVKSKLDYSYKTIALKYSSCTIKVWVRLGKKKSNLVDFVV

Annotated regions:
phrase: LFKSLMKKRKLVKGYKITCSGRFSRKQRTTYSWKAFGSLAFSTVKSKLDYSYKTIALKYSSCTIKVW
type: DOMAIN
name: Ribosomal_uS3_C
description: Small ribosomal subunit protein uS3, C-terminal
Protein sequence:
MTVKPDWLRVKAPQWQRVGSVKDILRDLQLNTVCEEASCPNIGECFQAGTATFLIMGPACTRACPYCDIDFEKKPQPLDSTEPERLAIAVKRLNLKHVVITAVNRDDLPDGGASQFVSCIEAIRKISPGTTIEVLIPDLCGNWQALAALLEAAPEVLNHNMETVPRLYKRVRPQADYDQSLELFNQAKRILPKVYTKSGIMVGLGETDAEVRQVMEDLRRVDCDILTIGQYLQPSQKHLGVKEFVTPEQFDVWRIYGESIGFLQVVSSPLTRSSYHAEQVQALMTRFPR

Annotated regions:
phrase: IMGPACTRACPYCDIDFEKKPQPLDSTEPERLAIAVKRLNLKHVVITAVNRDDLPDGGASQFVSCIEAIRKISPGTTIEVLIPDLCGNWQALAALLEAAPEVLNHNMETVPRLYKRVRPQADYDQSLELFNQAKRILPKVYTKSGIMVGLGETDAEVRQVMED
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TATFLIMGPACTRACPYCDIDFEKKPQPLDSTEPERLAIAVKRLNLKHVVITAVNRDDLPDGGASQFVSCIEAIRKISPGTTIEVLIPDLCGNWQALAALLEAAPEVLNHNMETVPRLYKRVRPQADYDQSLELFNQAKRILPKVYTKSGIMVGLGETDAEVRQVMEDLRRVDCDILTIGQYLQPSQKHLGVKEFVTPEQFDVWRIYG
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: VKPDWLRVKAPQWQRVGSVKDILRDLQLNTVCEEASCPNIGECFQAGTATFLIMGPACTRACPYCDIDFEKKPQPLDSTEPERLAIAVKRLNLKHVVITAVNRDDLPDGGASQFVSCIEAIRKISPGTTIEVLIPDLCGNWQALAALLEAAPEVLNHNMETVPRLYKRVRPQADYDQSLELFNQAKRILPKVYTKSGIMVGLGETDAEVRQVMEDLRRVDCDILTIGQYLQPSQKHLGVKEFVTPEQFDVWRIYGESIGFLQVVSSPLTRSSYHAEQV
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: FQAGTATFLIMGPACTRACPYCDIDFEKKPQPLDSTEPERLAIAVKRLNLKHVVITAVNRDDLPDGGASQFVSCIEAIRKISPGTTIEVLIPDLCGNWQALAALLEAAPEVLNHNMETVPRLYKRVRPQADYDQSLELFNQAKRILPKVYTKSGIMVGLGETDAEVRQVMEDLRRVDCDILTIGQYLQPSQKHLGVKEFVTPEQFDVWRIYGESIGF
type: DOMAIN
name: rSAM
description: Radical SAM