nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MKAHGLGEKDTRINLLNLEPAVAESRLRAFAEEHGEKAFRGSQVMRHLWAVPAADFNSMADLPASFRTLLDQHFVIPRLELATRQTSKDGTEKFLFRMHDGEFIETVSIPESNRLTFCISSQAGCALKCAFCATGAMGFARNLEAFEIAGQVRELRMIEDPLKPTNIVFMGMGEPLMNWKAVDPTLTILNDPKGFGIGARHITVSTVGVLPGIVALSNRPEQFRLAISIHAPNDELRHELMPINTKYPLGEVIDAARQFDRRVTFEYVMLGGVNDQPEHAAQLAELAHECKAFVNLIPLHPGGAGEFDATLMPKIITFSRLLQAENVEVAIRKSRGMDIAAACGQLRVERQGRRTPVGAN

Annotated regions:
phrase: AESRLRAFAEEHGEKAFRGSQVMRHLWAVPAADFNSMADLPASFRTLLDQHFVIPRLELATRQTSKDGTEKFLFRMHDGEFIETVSIPESNRLTFCISSQAGCALKCAFCATGAMGFARNLEAFEIAGQVRELRMIEDPLKPTNIVFMGMGEPLMNWKAVDPTLTILNDPKGFGIGARHITVSTVGVLPGIVALSNRPEQFRLAISIHAPNDELRHELMPINTKYPLGEVIDAARQFDRRVTFEYVMLGGVNDQPEHAAQLAELAHECKAFVNLIPLHPGGAGEFDATLMPKIITFSRLLQAENVEVAIRKSRGMDIAAACGQLRVERQGR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SSQAGCALKCAFCATGAMGFARNLEAFEIAGQVRELRMIEDPLKPTNIVFMGMGEPLMNWKAVDPTLTILNDPKGFGIGARHITVSTVGVLPGIVALSNRPEQFRLAISIHAPNDELRHELMPINTKYPLGEVIDAARQFDRRVTFEYVMLGGVNDQPEHAAQ
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: INLLNLEPAVAESRLRAFAEEHGEKAFRGSQVMRHLWAVPAADFNSMADLPASFRTLLDQHFV
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: ESNRLTFCISSQAGCALKCAFCATGAMGFARNLEAFEIAGQVRELRMIEDPLKPTNIVFMGMGEPLMNWKAVDPTLTILNDPKGFGIGARHITVSTVGVLPGIVALSNRPEQFRLAISIHAPNDELRHELMPINTKYPLGEVIDAARQFDRRVTFEYVMLGGVNDQPEHAAQLAELAHECKAFVNLIPLHPGGAGEFDATLMPKIITFSRLLQAENVEVAIRKSRGM
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MSLWGLISKMSPEKLQRLYVDFPQRLRHLLADWLESQPWEFLVGSDAFCYNMASALLSATVQRLQATAGEQGKGNSILPHISTLESIYQRDPLKLVATIRQILQGEKKAVIEEFRHLPGPFHRKQEELKFTTALGRLQHRVRETRLLRESLQQGAKTGQVSLQNLIDPPVNGPGPSEDLATMLQGTVGDLEATQALVLKRIQIWKRQQQLAGNGTPFEESLAGLQERCESLVEIYSQLQQEIGAASGELEPKTRASLISRLDEVLRTLVTSSFLVEKQPPQVLKTQTKFQAGVRFLLGLQFLGTSAKPPMVRADMVTEKQARELSLAQGPGTGVESTGEIMNNTVPLENSIPSNCCSALFKNLLLKKIKRCERKGTESVTEEKCAVLFSTSFTLGPNKLLIQLQALSLPLVVIVHGNQDNNAKATILWDNAFSEMDRVPFVVAERVPWEKMCETLNLKFMAEVGTSRGLLPEHFLFLAQKIFNDNSLSVEAFQHRCVSWSQFNKEILLGRGFTFWQWFDGVLDLTKRCLRSYWSDRLIIGFISKQYVTSLLLNEPDGTFLLRFSDSEIGGITIAHVIRGQDGSSQIENIQPFSAKDLSIRSLGDRIRDLAQLKNLYPKKPKDEAFRSHYKPEQMGKDGRGYVSTTIKMTVERDQPLPTPEPQMPAMVPPYDLGMAPDASMQLSSDMGYPPQSIHSFQSLEESMSVLPSFQEPHLQMPPNMSQITMPFDQPHPQGLLQCQSQEHAVSSPEPMLCSDVTMVEDSCLTQPV

Annotated regions:
phrase: WFDGVLDLTKRCLRSYWSDRLIIGFISKQYVTSLLLNEPDGTFLLRFSDSEIGGITIAHVIRGQDGSSQIENIQPFSAKDLSIRSLGDRIRDLAQLKNLYPKKPKDEAFRSHYKP
type: DOMAIN
name: SH2
description: SH2 domain

phrase: SLWGLISKMSPEKLQRLYVDFPQRLRHLLADWLESQPWEFLVGSDAFCYNMASALLSATVQRLQATAGEQGKGNSILPHISTLESIYQRDPLKLVATIRQILQGEKKAVIEEFR
type: DOMAIN
name: STAT_TF_prot_interaction
description: STAT transcription factor, protein interaction

phrase: KQPPQVLKTQTKFQAGVRFLLGLQFLGTSAKPPMVRADMVTEKQARELSLAQGPGTGVESTGEIMNNTVPLENSIPSNCCSALFKNLLLKKIKRCERKGTESVTEEKCAVLFSTSFTLGPNKLLIQLQALSLPLVV
type: DOMAIN
name: STAT_TF_DNA-bd
description: STAT transcription factor, DNA-binding

phrase: DRVPFVVAERVPWEKMCETLNLKFMAEVGTSRGLLPEHFLFLAQKIFNDNSLSVEAFQHRCVSWSQFNKEILLGRGFTFWQW
type: DOMAIN
name: STAT_linker
description: Signal transducer and activator of transcription, linker domain

phrase: WFDGVLDLTKRCLRSYWSDRLIIGFISKQYVTSLLLNEPDGTFLLRFSDSEIGGITIAHVIRGQDGSSQIENIQPFSAKDLSIRSLGDRIRDLAQLKNLYPKKPKDEAFRSHYKPEQMGKDGRGYVSTT
type: DOMAIN
name: STAT6_SH2
description: STAT6, SH2 domain

phrase: GFISKQYVTSLLLNEPDGTFLLRFSDSEIGGITIAHVIRGQDGSSQIENIQPFSAKDLSIRSLGDRIRDLAQLKNLYPKKPK
type: DOMAIN
name: SH2
description: SH2 domain

phrase: SLWGLISKMSPEKLQRLYVDFPQRLRHLLADWLESQPWEFLVGSDAFCYNMASALLSATVQRLQATAGEQGKGNSILPHISTLESIYQRDPLKLVATIRQILQGEKKAVI
type: DOMAIN
name: STAT_TF_prot_interaction
description: STAT transcription factor, protein interaction

phrase: IIGFISKQYVTSLLLNEPDGTFLLRFSDSEIGGITIAHVIRGQDGSSQIENIQPFSAKDLSIRSLGDRIRDLAQLKNL
type: DOMAIN
name: SH2
description: SH2 domain

phrase: PLPTPEPQMPAMVPPYDLGMAPDASMQLSSDMGYPPQSIHSFQSLEESMSVLPSFQEPHLQMPPNMSQITMPFDQPHPQGLLQCQSQEHAVSSPEPMLCSDVTMVEDSCLTQP
type: DOMAIN
name: STAT6_C
description: STAT6, C-terminal

phrase: EDLATMLQGTVGDLEATQALVLKRIQIWKRQQQLAGNGTPFEESLAGLQERCESLVEIYSQLQQEIGA
type: DOMAIN
name: STAT_TF_alpha
description: STAT transcription factor, all-alpha domain
Protein sequence:
MLKDMFKKTYTKIDTIYHRGSDGREAAKDGSSPAIPEGLWRKCNKCGKPIYTEDVRNNYYICPKCGGYFRVHAYRRIEMTADEGSFEEWEETMPVSNPLNFPGYEKKLAAAREKTKLNEAIVTGKAMIGGYPAVLGVCDARFLMSSMGHNVGEKIARAVERATEEKLPVILFACSGGARMQEGLVSLMQMAKTAAALKRHHEAGQLFVSVLTDPTTGGVTASFAMLGDIILAEPNALIGFAGPRVIEQTIGQKLPEGFQRSEFLLEHGFIDKIVKREEMKETLIHILRLHSSEPGPEVYAEQETEGKAASGGIGAGILGAAGRVRRKAGNTAEGPKTAWDSVLLSRKSDRLVASDYIHALFDGFMEFHGDRYFKDDGAVIGGIASFHGIPVTVIGQEKGRTTKDNILRNFGMPSPEGYRKALRLMKQAECFGRPIICFVDTPGAFCGIEAEERGQGEAIARNLFEMASLKVPVLSLVIGEGGSGGALALAVANEVWMMENAIYSVLSPEGFASILWKDSKKADEAARVMKITARDLKKLGLIERVIPEEVPASKESLPAIREILDTAVAEFLETYGAMDGEALANQRYDRFRRI

Annotated regions:
phrase: AYRRIEMTADEGSFEEWEETMPVSNPLNFPGYEKKLAAAREKTKLNEAIVTGKAMIGGYPAVLGVCDARFLMSSMGHNVGEKIARAVERATEEKLPVILFACSGGARMQEGLVSLMQMAKTAAALKRHHEAGQLFVSVLTDPTTGGVTASFAMLGDIILAEPNALIGFAGPRVIEQTIGQ
type: DOMAIN
name: AcCoA_carboxyl_beta
description: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta

phrase: RVRRKAGNTAEGPKTAWDSVLLSRKSDRLVASDYIHALFDGFMEFHGDRYFKDDGAVIGGIASFHGIPVTVIGQEKGRTTKDNILRNFGMPSPEGYRKALRLMKQAECFGRPIICFVDTPGAFCGIEAEERGQGEAIARNLFEMASLKVPVLSLVIGEGGSGGALALAVANEVWMMENAIYSVLSPEGFASILWKDSKKADEAARVMKITARDLKKLGLIERVIPEEVPASKESLPAIREILDTAVAEFLE
type: DOMAIN
name: COA_CT_C
description: Acetyl-coenzyme A carboxyltransferase, C-terminal

phrase: LWRKCNKCGKPIYTEDVRNNYYICPKCGGYFRVHAYRRIEMTADEGSFEEWEETMPVSNPLNFPGYEKKLAAAREKTKLNEAIVTGKAMIGGYPAVLGVCDARFLMSSMGHNVGEKIARAVERATEEKLPVILFACSGGARMQEGLVSLMQMAKTAAALKRHHEAGQLFVSVLTDPTTGGVTASFAMLGDIILAEPNALIGFAGPRVIEQTIGQKLPEGFQRSEFLLEHGFIDKIVKREEMKETLIHILRLHSSEPGPEVYAEQET
type: DOMAIN
name: COA_CT_N
description: Acetyl-coenzyme A carboxyltransferase, N-terminal

phrase: WRKCNKCGKPIYTEDVRNNYYICPK
type: DOMAIN
name: Znf-ACC
description: Acetyl-coA carboxylase zinc finger domain
Protein sequence:
MSLTNTKTGFSVKDILDLPDTNDEDGSVAEGPEEESEGPEPAKRAGPLGQGALDAVQSLPLKSPFYDSSDNPYTRWLASTEGLQYSLHGLAASAPPQDSSSKSPEPSADESPDNDKETQGGGGDAGKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKMKRARAEKGMEVTPLPSPRRVAVPVLVRDGKPCHALKAQDLAAATFQAGIPFSAYSAQSLQHMQYNAQYSSASTPQYPTAHPLVQAQQWTW

Annotated regions:
phrase: RKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKMK
type: DOMAIN
name: HD
description: Homeodomain

phrase: QRYLSAPEREH
type: DOMAIN
name: HD_metazoa
description: Homeodomain, metazoa

phrase: IRLTPTQVKI
type: DOMAIN
name: HD_metazoa
description: Homeodomain, metazoa

phrase: WFQNHRYKM
type: DOMAIN
name: HD_metazoa
description: Homeodomain, metazoa

phrase: RKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKMK
type: DOMAIN
name: HD
description: Homeodomain

phrase: KRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKMKRARAE
type: DOMAIN
name: HD
description: Homeodomain

phrase: GKKRKRRVLFSKAQTYELERRFRQQRYLSAPEREHLASLIRLTPTQVKIWFQNHRYKMKR
type: DOMAIN
name: HD
description: Homeodomain

phrase: LASLIRLTPTQVKIWFQNHRYKM
type: CONSERVED_SITE
name: Homeobox_CS
description: Homeobox, conserved site
Protein sequence:
MTVKQSQASRLSPIFEPCRDDDRAALIGYLPTGYPDVPTSVQAMVALVESGCDIVEVGVPYSDPGMDGPTIARATEAALHGGVRVRDTLAAVEAISAAGGRAVVMTYWNPVLRYGVDAFARDLAAAGGYGLITPDLIPDEAGQWLAASERHGLDRIFLVAPSSTPQRLALTVEASRGFVYAASTMGVTGARDAVSHAAPELVSRVREISDIPVGVGLGVRSREQAAQIGGYADGVIVGSALVSALGDGGLTALRALTEELAAGVRQRAAAS

Annotated regions:
phrase: VEVGVPYSDPGMD
type: ACTIVE_SITE
name: Trp_synthase_alpha_AS
description: Tryptophan synthase, alpha chain, active site
Protein sequence:
MSEQKAFSLDIRDNGIAVITIDVPGESMNTLKDTFADEVGTLLNRLESESDIKGVVFISGKPGSFIAGADINMINDCETAADAESLARKGQAMFDRIEQLDVPVVAAINGACLGGGLELAMACHVRVASDESKTQLGLPEVQLGLLPGSGGTQRLPELVGVQQGLTMMLTAKQLRAKQAKKAGLVDEVVPNSILLEAAMKHALKSKPKRTKAPLKGVSKLLEATSYGRGIIFKKAAEQAQKKSQGNYPAIDKIIETVRTGVEKGREAGFDQEARSFGQLAMTNESYQLRQIFFATTEMKKETGADGVKPAETHRVGVLGGGLMGGGIAYVTAAKAGLPARIKDIAADGITHALHYSYERLNKKVKRKHMRRAELEHTMLKLSGTLDYSGFERIDVVIEAVFEDLDLKQKMVADIEQHAKPETIFATNTSSLPITQIAEKAKRPENVIGLHYFSPVDKMPLAEIITHQGTSDQTIATTVALARKQGKTPIVVKDGAGFFVNRILAPYMNEAARLVLAGEPIEHVDKALVKFGFPVGPVTLLDEVGIDVGAKVAGILRKELGERFEPPAAFDKLMDDDRKGKKNQKGFYQYGKGVKGKPVDSSVYSLLDIEPKQQLDRETIAELCVLPMLNEAAYCLQEGIIRSARDGDIGSVYGIGFPPFRGGPFRYMDEIGIGTLVAKLEKQAEKRGDRFQPAPLLVEMAEQQRRFY

Annotated regions:
phrase: GFFVNRILAPYMNEAARLVLAGEPIEHVDKALVKFGFPVGPVTLLDEVGIDVGAKVAGILRKELGERFEPPAAFDKLMDDDRKGKKNQKGFYQ
type: DOMAIN
name: 3HC_DH_C
description: 3-hydroxyacyl-CoA dehydrogenase, C-terminal

phrase: CVLPMLNEAAYCLQEGIIRSARDGDIGSVYGIGFPPFRGGPFRYMDEIGIGTLVAKLEKQAEKRGDRFQPAPLLVEMAEQQ
type: DOMAIN
name: 3HC_DH_C
description: 3-hydroxyacyl-CoA dehydrogenase, C-terminal

phrase: VGVLGGGLMGGGIAYVTAAKAGLPARIKDIAADGITHALHYSYERLNKKVKRKHMRRAELEHTMLKLSGTLDYSGFERIDVVIEAVFEDLDLKQKMVADIEQHAKPETIFATNTSSLPITQIAEKAKRPENVIGLHYFSPVDKMPLAEIITHQGTSDQTIATTVALARKQGKTPIVVK
type: DOMAIN
name: 3-OHacyl-CoA_DH_NAD-bd
description: 3-hydroxyacyl-CoA dehydrogenase, NAD binding

phrase: VAAINGACLGGGLELAMACH
type: CONSERVED_SITE
name: Enoyl-CoA_hyd/isom_CS
description: Enoyl-CoA hydratase/isomerase, conserved site

phrase: DGAGFFVNRILAPYMNEAARLVLAG
type: CONSERVED_SITE
name: 3-OHacyl-CoA_DH_CS
description: 3-hydroxyacyl-CoA dehydrogenase, conserved site
Protein sequence:
MQLTSFTDYGLRALIYMASLPEGRMTSISEVTDVYGVSRNHMVKIINQLSRAGYVTAVRGKNGGIRLGKPASAIRIGDVVRELEPLSLVNCSSEFCHITPACRLKQALSKAVQSFLTELDNYTLADLVEENQPLYKLLLVE

Annotated regions:
phrase: LSRAGYVTAVRGKNGGIR
type: CONSERVED_SITE
name: TR_Rrf2-type_CS
description: Transcription regulator Rrf2-type, conserved site
Protein sequence:
MNIAAVQKTCAPLLRPLGAAYAACMAARRAAYEAGVLPRFAPPRPVVSVGNICWGGTGKTPLVHWLLRWCGAHGLSAAVLARGYGAKPPQLPLLVRPGNTAAEAGDEPLMLARQNPDAAVLVDPVRRRAGHWAEAHLAPHLYLLDDGFQHLAVRRDLDIVVLRPVDLTGEWGRTIPAGSWREGTSALGRAHAFCVKAEPDLFNALGPQLERRLVRYGMPVFSFRLAPRGLVRVGRGLDPRPTEQGAATRAHLDGAPYVLVTGVGEPAQVHATATHFFGYPPLRHRIFPDHHPYGPGDVRQLAGEGCAVVCTPKDAVKLAPLCGEGAGHEGTNQPDLWAFDLVTEFGPALWSATSFPEWWAARWAGLSAARRV

Annotated regions:
Protein sequence:
MSKPDSKLDKYAQRDRLGLWGTGDNEVVGSLSGFTRLLDKRYSKGLAFTHEERQQLGIHGMLPYVVREPSEQVEHCRALLARLDQDLDKYMYLISLSERNERLFYNVLSSDIAYMMPLVYTPTVGLACQRYSLIHQNAKGMFISIKDKGHIYDVLKNWPETDVRAIVVTDGERILGLGDLGANGMGIPVGKLSLYTALAGIKPSQCLPITLDVGTNTESILEDPLYIGLRERRATGDLYDEFIDEFMHACVRRFGQNCLIQFEDFANANAFRLLSKYRDSFCTFNDDIQGTASVAVAGLLASLKIKKTQLKDNTLLFLGAGEAALGIANLCLMAMKVEGLTEEEAKARIWMVDRCRYIIKIHPDTYRCFLCSRGVITRDRPKGGLTEHKLHFAQLHEPIDTLAEAVRKVRPNVLIGAAAQGGAFNQEILELMADINETPIIFALSNPTSKAECTAEEAYTYTKGRCIFASGSPFAPVTYNNKKFYPGQGNNSYIFPGVALGVLCAGMLNIPEQVFLVAAERLAELVSKDDLAKGSLYPPLSSIVSCSMAIAERIVEYAYKNGLATVRPEPVNKLAFIKAQMYDLDYPRSVPATYKM

Annotated regions:
phrase: ERNERLFYNVLSSDIAYMMPLVYTPTVGLACQRYSLIHQNAKGMFISIKDKGHIYDVLKNWPETDVRAIVVTDGERILGLGDLGANGMGIPVGKLSLYTALAGIKPSQCLPITLDVGTNTESILEDPLYIGLRERRATGDLYDEFIDEFMHACVRRFGQNCLIQFEDFANANAFRLLSKY
type: DOMAIN
name: Malic_N_dom
description: Malic enzyme, N-terminal domain

phrase: IQGTASVAVAGLLASLKIKKTQLKDNTLLFLGAGEAALGIANLCLMAMKVEGLTEEEAKARIWMVDRCRYIIKIHPDTYRCFLCSRGVITRDRPKGGLTEHKLHFAQLHEPIDTLAEAVRKVRPNVLIGAAAQGGAFNQEILELMADINETPIIFALSNPTSKAECTAEEAYTYTKGRCIFASGSPFAPVTYNNKKFYPGQGNNSYIFPGVALGVLCAGMLNIPEQVFLVAAERLAELVSKDDLAKGSLYPPLSSIVSCSMAIAERIVEYA
type: DOMAIN
name: Malic_NAD-bd
description: Malic enzyme, NAD-binding

phrase: IQGTASVAVAGLLASLKIKKTQLKDNTLLFLGAGEAALGIANLCLMAMKVEGLTEEEAKARIWMVDRCRYIIKIHPDTYRCFLCSRGVITRDRPKGGLTEHKLHFAQLHEPIDTLAEAVRKVRPNVLIGAAAQGGAFNQEILELMADINETPIIFALSNPTSKAECTAEEAYTYTKGRCIFASGSPFAPVTYNNKKFYPGQGNNSYIFPGVALGVLCAGMLNIPEQVFLVAAERLAELVSKDDLAKGSLYPPLSSIVSCSMAIAERIVEYA
type: DOMAIN
name: Malic_NAD-bd
description: Malic enzyme, NAD-binding

phrase: FNDDIQGTASVAVAGL
type: CONSERVED_SITE
name: Malic_enzyme_CS
description: Malic enzyme, conserved site

phrase: SERNERLFYNVLSSDIAYMMPLVYTPTVGLACQRYSLIHQNAKGMFISIKDKGHIYDVLKNWPETDVRAIVVTDGERILGLGDLGANGMGIPVGKLSLYTALAGIKPSQCLPITLDVGTNTESILEDPLYIGLRERRATGDLYDEFIDEFMHACVRRFGQNCLIQFEDFANANAFRLLSKY
type: DOMAIN
name: Malic_N_dom
description: Malic enzyme, N-terminal domain
Protein sequence:
MAGGVTSGSAEGWSKRFEEGLHPVIERFNASISFDITLLQEDLDGSIAHARMLGECGVISLEEAAQLEGGLEKIRSEAAAGEFQPGLVDEDVHFAVERRLIALLGPVGKKLHTGRSRNDQVGTDLRLWLRRRLDDLDCELERFQHALLTQAESHRQTLIPGYTHLQRAQPLCLAHHLLAYIEMIQRDRDRLKDVRGRVNISPLGAAALAGTSVPIDRQNTAAALGFECIYANSLDAVSDRDFAVEYTAAASLVMVHLSRLAEEVIFWASEEFAFVRLSDRCATGSSLMPQKKNPDVPELVRGKCGRVFGHLQGLLTMIKGLPLAYNKDFQEDKEALFDTVRTTKDCVEAMSILMEEGLEFCSERLAAAVESDFSNATDVADYLVAKGVPFREAYQLVGAVVKRCLDEGILLCDLSLEQWQEFHSAIAEDLHEALAPKRVVAVRISEGGTGFDRVEEQLRHWRSRLDSVLS

Annotated regions:
phrase: FEEGLHPVIERFNASISFDITLLQEDLDGSIAHARMLGECGVISLEEAAQLEGGLEKIRSEAAAGEFQPGLVDEDVHFAVERRLIALLGPVGKKLHTGRSRNDQVGTDLRLWLRRRLDDLDCELERFQHALLTQAESHRQTLIPGYTHLQRAQPLCLAHHLLAYIEMIQRDRDRLKDVRGRVNISPLGAAALAGTSVPIDRQNTAAALGFECIYANSLDAVSDRDFAVEYTAAASLVMVHLSRLAEEVIFWASEEFAFVRLSDRCATGSSLMPQKKNPDVPELVRGKCGRVF
type: DOMAIN
name: Fumarate_lyase_N
description: Fumarate lyase, N-terminal

phrase: GSSLMPQKK
type: CONSERVED_SITE
name: Fumarate_lyase_CS
description: Fumarate lyase, conserved site

phrase: FSNATDVADYLVAKGVPFREAYQLVGAVVKRCLDEGILLCDLSLEQWQEFHSAIAEDLHEALAPKRVV
type: DOMAIN
name: Arg_succ_lyase_C
description: Argininosuccinate lyase, C-terminal
Protein sequence:
MTLILGIDPGSRITGFGVVRETARGCEYVASGCIRTGNGPLHERLHVVFRSVREVIRTHGPTALSIEQVFMARNADSALKLGQARGAAIVAAMEEGLSVAEYTASQVKQAVVGTGGADKQQVQMMVMHLLKLTQKPQIDASDALAIALCHAHTQQSLVPHGLVGARRRGGRLRL

Annotated regions:
phrase: GTGGADKQQVQMMVMHLLKLTQKPQIDASDALAI
type: BINDING_SITE
name: X-over_junc_endoDNase_Mg_BS
description: Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site
Protein sequence:
MGAKWSKSWPTIRDRMRRTEPRRAEPAAVGVGAASQDLDRHGALTSSNTPATNAACAWLEAQQEDEEVGFPVKPQVPLRPMTYKAAFDLSFFLKEKGGLEGLIYSKQRQDILDLWVYNTQGFFPDWQSYTPGPGVRYPLTFGWCFKLVPVDPREVEEANEGENNCLLHPMSLHGMEDERGEVLQWKFDSMLARRHLAREQHPEFYKDC

Annotated regions:
Protein sequence:
MASQGTKRSYEQMETGGERQDATEIRASVGRMIGGIGRFYIQMCTELKLSDYEGRLIQNSITIERMVLSAFDERRNKYLEEHPSAGKDPKKTGGPIYRRIDGKWTRELILYDKEEIRRVWRQANNGEDATAGLTHIMIWHSNLNDATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTIAMELIRMIKRGINDRNFWRGENGRRTRIAYERMCNILKGKFQTAAQRAMMDQVRESRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGHDFEREGYSLVGIDPFKLLQNSQVFSLIRPNENPAHKSQLVWMACHSAAFEDLRVSGFIRGKKVVPRGKLSTRGVQIASNENVEAMDSNTLELRSRYWAIRTRSGGNTNQQRASAGQISVQPTFSVQRNLPFERATVMAAFIGNNEGRTSDMRTEIIRMMESAKPEDLSFQGRGVFELSDEKATNPIVPSFDMNNEGSYFFGDNAEEYDN

Annotated regions:
Protein sequence:
MKILVIGSGGREHALAKKFMESPQVEEVFVAPGNSGMEKDGIQIVDISELSNDKLVKFAQNQNIGLTFVGPETALMNGVVDAFIKAELPIFGPNKMAAELEGSKDFAKSIMKKYGVPTADYATFDSLEPALAYLDEKGVPLVIKADGLAAGKGVTVAFDIETAKSALADIFSGSQGKVVIEEFLDGEEFSLFSFIHDGKIYPMPIAQDHKRAFDGDKGPNTGGMGAYSPVLHISKEVVNEALEKVVKPTVAGMIEEGKSFTGVLYAGLILTEDGVKTIEFNARFGDPETQVVLPRLKSDLAQAIIDILAGNEPTLEWLESGVTLGVVVAAEGYPSQAKLGLILPEIPEGLNVYYAGVSKNENNQLISSGGRVYLVSETGEDVKSTQKLLYEKLDKLENDGFFYRHDIGSRAI

Annotated regions:
phrase: RFGDPET
type: CONSERVED_SITE
name: PRibGlycinamide_synth_CS
description: Phosphoribosylglycinamide synthetase, conserved site

phrase: VTLGVVVAAEGYPSQAKLGLILPEIPEGLNVYYAGVSKNENNQLISSGGRVYLVSETGEDVKSTQKLLYEKLDKLENDGFFYRHDIGSRA
type: DOMAIN
name: PRibGlycinamide_synth_C-dom
description: Phosphoribosylglycinamide synthetase, C-domain

phrase: GSKDFAKSIMKKYGVPTADYATFDSLEPALAYLDEKGVPLVIKADGLAAGKGVTVAFDIETAKSALADIFSGSQGKVVIEEFLDGEEFSLFSFIHDGKIYPMPIAQDHKRAFDGDKGPNTGGMGAYSPVLHISKEVVNEALEKVVKPTVAGMIEEGKSFTGVLYAGLILTEDGVKTIEFNARFGDPE
type: DOMAIN
name: PRibGlycinamid_synth_ATP-grasp
description: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain

phrase: KSIMKKYGVPTADYATFDSLEPALAYLDEKGVPLVIKADGLAAGKGVTVAFDIETAKSALADIFSGSQGKVVIEEFLDGEEFSLFSFIHDGKIYPMPIAQDHKRAFDGDKGPNTGGMGAYSPVLHISKEVVNEALEKVVKPTVAGMIEEGKSFTGVLYAGLILTEDGVKTIEFNARFGDPETQVVLPRLKSDLAQAIIDIL
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold

phrase: LGVVVAAEGYPSQAKLGLILPEIPEGLNVYYAGVSKNENNQLISSGGRVYLVSETGEDVKSTQKLLYEKLDKLENDGFFYRHDIGS
type: DOMAIN
name: PRibGlycinamide_synth_C-dom
description: Phosphoribosylglycinamide synthetase, C-domain

phrase: MKILVIGSGGREHALAKKFMESPQVEEVFVAPGNSGMEKDGIQIVDISELSNDKLVKFAQNQNIGLTFVGPETALMNGVVDAFIKAELPIFGPNKMAAEL
type: DOMAIN
name: PRibGlycinamide_synth_N
description: Phosphoribosylglycinamide synthetase, N-terminal
Protein sequence:
MISLIEKAPYIPYPLALYEKLEQRHTLLFESAEIESKAHTKSLLMAKACLKLVCNHNIVTITSLTPNGGAFLQTLSAFFKTPIQDNALTLTYTKDKKIQDEFLKLFEPSPFDALRGLFKSVKTRPKHPFTLFSAGVFSFEMLNFFEDLPHLKANDNTANDFIFYVAQNLIIIDHKEKSAEILGACFDERFKTEIAKELQDLKELVKNIKSDFIPKKAKQSIEVSVSCDDSEFEKKVLFLQEEIKKGEIFQAVLSRSFYMECLEGLSAYYHLKLSNPSPYMFYIKDSDFILFGASPESALKYNALTNTAEIYPIAGTRLRGKDKQGNIDYDLDSKMEFDLQHDYKERAEHIMLVDLARNDMARVSKKRYCDKLLKVDKYSNVMHLVSRVVGELKKGCDSLHAYRSFMNAGTLSGAPKISAIKLIYQLENQRRGSYGGSVGYLNSEGSMDSCITIRSCFVKNNRAVIQAGAGIVLDSVPQNEANETRAKVQALIDAIRKTIS

Annotated regions:
phrase: PLALYEKLEQRHTLLFESAEIESKAHTKSLLMAKACLKLVCNHNIVTITSLTPNGGAFLQTLSAFFKTPIQDNALTLTYTKDKKIQDEFLKLFEPSPFDALRGLFKSVKTRPKHPFTLFSAGVFSFEMLNFFEDLPHLKANDNTANDFIFYVAQNLIIIDHKEK
type: DOMAIN
name: Anth_synth_I_N
description: Anthranilate synthase component I, N-terminal

phrase: SEFEKKVLFLQEEIKKGEIFQAVLSRSFYMECLEGLSAYYHLKLSNPSPYMFYIKDSDFILFGASPESALKYNALTNTAEIYPIAGTRLRGKDKQGNIDYDLDSKMEFDLQHDYKERAEHIMLVDLARNDMARVSKKRYCDKLLKVDKYSNVMHLVSRVVGELKKGCDSLHAYRSFMNAGTLSGAPKISAIKLIYQLENQRRGSYGGSVGYLNSEGSMDSCITIRSCFVKNNRAVIQAGAGIVLDSVPQNEANETRA
type: DOMAIN
name: Chorismate_C
description: Chorismate-utilising enzyme, C-terminal
Protein sequence:
MALGALKSDSYVELSQYRDQHFRGNRSDQECLLKHSCTLYVGNLSFYTTEEQIHELFSKSGDVKKIVMGLDKIKKTACGFCFVEYYTRTDAEQAMRFINGTRLDDRIIRTDWDAGFKEGRQYGRGKSGGQVRDEYRQDYDAGRGGYGKIVQSI

Annotated regions:
phrase: CTLYVGNLSFYTTEEQIHELFSKSGDVKKIVMGLDKIKKTACGFCFVEYYTRTDAEQAMRFINGTRLDDRIIRTDWDA
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: TLYVGNLSFYTTEEQIHELFSKSGDVKKIVMGLDKIKKTACGFCFVEYYTRTDAEQAMRFINGTRLDDRIIRT
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: LYVGNLSFYTTEEQIHELFSKSGDVKKIVMGLDKIKKTACGFCFVEYYTRTDAEQAMRFINGTRLDDRIIRTDWDAG
type: DOMAIN
name: NCBP2_RRM
description: NCBP2, RNA recognition motif

phrase: LYVGNLSFYTTEEQIHELFSKSGDVKKIVMGLDKIKKTACGFCFVEYYTRTDAEQAMRFINGTRLDDRI
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain
Protein sequence:
MIEFEKPNITKIDENKDYGKFVVEPLERGYGTTLGNSLRRVLLASLPGAAVTSINIEGVLHEFDTISGVREDVMQIILNVKGIAVKSYVQDEKIIELDVEGPAEVTAGDILTDSDIEIINPDHYLFTIGEGASFKATMTVNSGRGYVPADENKKDDAPVGTLAVDSIYTPVTKVNYQVEPARVGSNDGFDKLTLEILTNGTIIPEDALGLSARILTEHLNLFTNLTEVAIAADVMKEAEKTSDDRILERTIEELDLSVRSYNCLKRAGINTVFDLTEKSEPEMMKVRNLGRKSLEEVKVKLADLGLGLKNDK

Annotated regions:
phrase: INIEGVLHEFDTISGVREDVMQIILNVKGIAVKSYVQDEKIIELDVEGPAEVTAGDILTDSDIEIINPDHYLFTIGEGASFKATMTVNSGRGYVPADENKKDDAPVGTLAVDSIY
type: DOMAIN
name: DNA-dir_RNA_pol_insert
description: DNA-directed RNA polymerase, insert domain

phrase: EPLERGYGTTLGNSLRRVLLASLPGAAVTSINIEGVLHEFDTISGVREDVMQIILNVKGIAVKSYVQDEKIIELDVEGPAEVTAGDILTDSDIEIINPDHYLFTIGEGASFKATMTVNSGRGYVPADENKKDDAPVGTLAVDSIYTPVTKVNYQVEPARVGSNDGFDKLTLEILTNGTIIPEDALGLSARILTEH
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: EKTSDDRILERTIEELDLSVRSYNCLKRAGINTVFDLTEKSEPEMMKVRNLGRKSLEEVKVKL
type: DOMAIN
name: RNAP_asu_C
description: RNA polymerase, alpha subunit, C-terminal

phrase: YGKFVVEPLERGYGTTLGNSLRRVLLASLPGAAVTSINIEGVLHEFDTISGVREDVMQIILNVKGIAVKSYVQDEKIIELDVEGPAEVTAGDILTDSDIEIINPDHYLFTIGEGASFKATMTVNSGRGYVPADENKKDDAPVGTLAVDSIYTPVTKVNYQVEPARVGSNDGFDKLTLEILTNGTIIPEDALGLSARILTEHLNLFTN
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type
Protein sequence:
MQESGLKPILWKNKELILLDQRVLPGTTSYITAKTLEDCIFAIREMVVRGAPAIAITGAFGITLYWNSLVSKPSFSELKLKLSELLESRPTAVNLRLAIEEFSSRFPESNYSSFSLEEIQKGAEELALFMLSEDLENNLTLSKYALSLFPKQPSSLNIITHCNTGALATAGHGTALGVIRSLRDAGHSLTVFADETRPYLQGARLTAWELQEEKIQSFLITDNMAGWVMSSRKIDAVIVGADRIASNGDTANKIGTYPLAIVAKHHGVPFYVAATAKSMDFRIPNGSYIPIEMRKEEEITSFGFLKDSDGKPLLKEGVIAPKGMKALNPSFDVTPASLITGIITEKGIVSPVTEENLKKIFQSI

Annotated regions:
Protein sequence:
MLYQQISQNKRRTVILLFAFFVLLVVIGAAAGYLLADSYQLGAAFALIIGAIYAFSMIFQSTSLVMGMNKAKEITVNDAPDFFHIVEDMALVAQIPMPKVFIIDDPSLNAFATGSSPQNAAVAATTGLLKVMNREELEAVIGHEVSHIRNYDIRISTIAVALASAVTLISSIGGRMMWYSGGRRRDDDRNDNGFGAIMLIFSILSLILAPLAASLVQLAISRQREYLADASSVELTRNPEGMIRALQKLSNSQPMTHPVDDASAALYINEPRKKEKLSALFSTHPPIEDRIERLKHM

Annotated regions:
phrase: HIVEDMALVAQIPMPKVFIIDDPSLNAFATGSSPQNAAVAATTGLLKVMNREELEAVIGHEVSHIRNYDIRISTIAVALASAVTLISSIGGRMMWYSGGRRRDDDRNDNGFGAIMLIFSILSLILAPLAASLVQLAISRQREYLADASSVELTRNPEGMIRALQKLSNSQPMTHPVDDASAALYINEPRKKEKLSALFSTHPPIEDRIERLK
type: DOMAIN
name: Peptidase_M48
description: Peptidase M48
Protein sequence:
MSEVRTRIAPSPTGDPHVGTAYIALFNMAFARKMGGKFILRIEDTDQTRSTPESEKMILDALRWLGLDWAEGPDVGGPYGPYRQSERGDIYGQYAQELIDKGHAFYAFETTEELDQMRNEQKEQGLPQKYDGRALNLTAEEVQAKLDAGVPYVIRMKIPEEGTCVVQDMLRGTIEIDWAQVDMQVLLKADGMPTYHLANVVDDHLMKITHVIRGEEWINSAPKHILLYQYFGWDMPTLCHMPLLRNPDKSKLSKRKNPTSILYYQRMGYMSEAVINYLGRMGWSMPDEREKFSLDEMIEHFDIQRVSLGGPVFDVEKLSWLNGMWIRENLTPETFAQKYVEWALNPEYLMKILPLVIPRVETFSDVADVAGFFLKGMLPITKEDFSSIKLEEETLRKAMQFALWRLEALSKWEKDEIFNEMKALAQVMEIKPKDFFAPLFVAISGTTASVSVFDSMAILGSDISRARMRTAVNVLGGPSKKEAKRWEKEYADL

Annotated regions:
phrase: FAQKYVEWALNPEYLMKILPLVIPRVETFSDVADVAGFFLKGMLPITKEDFSSIKLEEETLRKAMQFALWRLEALSKWEKDEIFNEMKALAQVMEIKPKDFFAPLFVAISGTTASVSVFDSMAILGSDISRARMRT
type: DOMAIN
name: aa-tRNA-synth_I_cd-bd
description: Aminoacyl-tRNA synthetase, class I, anticodon-binding

phrase: EVRTRIAPSPTGDPHVGTAYIALFNMAFARKMGGKFILRIEDTDQTRSTPESEKMILDALRWLGLDWAEGPDVGGPYGPYRQSERGDIYGQYAQELIDKGHAFYAFETTEELDQMRNEQKEQGLPQKYDGRALNLTAEEVQAKLDAGVPYVIRMKIPEEGTCVVQDMLRGTIEIDWAQVDMQVLLKADGMPTYHLANVVDDHLMKITHVIRGEEWINSAPKHILLYQYFGWDMPTLCHMPLLRNPDKSKLSKRKNPTSILYYQRMGYMSEAVINYLGRMGWSMPDEREKFSLDEMIEHFDIQRVSLGGPVFDVEKLSWLNGMWIR
type: DOMAIN
name: GluRS_core
description: Glutamyl-tRNA synthetase

phrase: PSPTGDPHVGT
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: EVRTRIAPSPTGDPHVGTAYIALFNMAFARKMGGKFILRIEDTDQTRSTPESEKMILDALRWLGLDWAEGPDVGGPYGPYRQSERGDIYGQYAQELIDKGHAFYAFETTEELDQMRNEQKEQGLPQKYDGRALNLTAEEVQAKLDAGVPYVIRMKIPEEGTCVVQDMLRGTIEIDWAQVDMQVLLKADGMPTYHLANVVDDHLMKITHVIRGEEWINSAPKHILLYQYFGWDMPTLCHMPLLRNPDKSKLSKRKNPTSILYYQRMGYMSEAVINYLGRMGWSMPDEREKFSLDEMIEHFDIQRVSLGGPVFDVEKLS
type: DOMAIN
name: Glu/Gln-tRNA-synth_Ib_cat-dom
description: Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain
Protein sequence:
MYKLVKPFLFKLDPERAHGMTIDALKTVQKFPIMYSIMDKLFNYSNPILAQTIHGIKFNNPIGLAAGFDKSCEVPKALEHVGFGAIELGGITPKPQPGNPKPRMYRLVEDNALINRMGFNNIGMNKALSHLRRHAYTIPVGINVGVNKKTSYEDRYQDYIKVIDTFKNDVTFFTVNISSPNTENLQNFHDKDEFSMLCEAITHFKSENEINVPIFLKLTSDMELEGFKNILPSITKTFDGVILANTTRQRDGLTSDNKTEEGGLSGKPLFERNLKLVKYAYQETQGKFLIIGTGGIFSSEDAIKMLRNGASLLQIYSSLVIEGPGLTKKINKEIAQYLTENNYHNVSDIIGLDA

Annotated regions:
phrase: LAQTIHGIKFNNPIGLAAGFDKSCEVPKALEHVGFGAIELGGITPKPQPGNPKPRMYRLVEDNALINRMGFNNIGMNKALSHLRRHAYTIPVGINVGVNKKTSYEDRYQDYIKVIDTFKNDVTFFTVNISSPNTENLQNFHDKDEFSMLCEAITHFKSENEINVPIFLKLTSDMELEGFKNILPSITKTFDGVILANTTRQRDGLTSDNKTEEGGLSGKPLFERNLKLVKYAYQETQGKFLIIGTGGIFSSEDAIKMLRNGASLLQIYSSLVIEGPGLTKKINKEIAQY
type: DOMAIN
name: Dihydroorotate_DH_cat
description: Dihydroorotate dehydrogenase, catalytic

phrase: IIGTGGIFSSEDAIKMLRNG
type: CONSERVED_SITE
name: Dihydroorotate_DH_CS
description: Dihydroorotate dehydrogenase, conserved site

phrase: GAIELGGITPKPQPGNPKP
type: CONSERVED_SITE
name: Dihydroorotate_DH_CS
description: Dihydroorotate dehydrogenase, conserved site