nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MRTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYEVANTLRNEFCIKLTGEVRVRPESQVNKDMATGEVEILAKGLEIINRSDVLPLDFNQKNSEEQRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTADQVRATTEKMVREMWQELLNVDLGEFPVMPFSEAIRRFGSDKPDLRNPLELVDVADLVKDVEFKVFSGPANDEKGRVAVIRVPGGAELTRKQIDGYAEFVGIYGAKGLAWMKVNDRAAGMEGIQSPVAKFLNEDVINGILDRTQAESGDIILFGADKANIVAEALGALRLKLGKDLDITKEGTWAPLWVVDFPMFEEDDEGNLHAMHHPFTSPLGVTAEELKANPAAANSNAYDMVLNGYEVGGGSVRIHNAEMQAAVFDILGINAEEQQLKFGFLLDALKFGTPPHAGLAFGLDRLVMLLCGTENIRDVIAFPKTTAAACLLTDAPSLANPAALEELAIAVTVAKEKDAE

Annotated regions:
phrase: RTHYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYEVANTLRNEFCIKLTGEVRVRPESQVNKDMATGEVEILAKGLEIINRSDVLPLDFNQKNSEEQRLKYRYLDLRRPE
type: DOMAIN
name: Asp-tRNA-ligase_1_N
description: Aspartate-tRNA ligase, type 1, anticodon recognition domain

phrase: IKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTADQVRATTEKMVREMWQELLNVDLGEFPVMPFSEAIRRFGSDKPDLRNPLELVDVADLVKDVEFKVFSGPANDEKGRVAVIRVPGGAELTRKQIDGYAEFVGIYGAKGLAWMKVNDRAAGMEGIQSPVAKFLNEDVINGILDRTQAESGDIILFGADKANIVAEALGALRLKLGKDLDITKEGTWAPLWVVDFPMFEEDDEGNLHAMHHPFTSPLGVTAEELKANPAAANSNAYDMVLNGYEVGGGSVRIHNAEMQAAVFDILGINAEEQQLKFGFLLDALKFGTPPHAGLAFGLDRLVMLLCGTENIRDVIAFPKT
type: DOMAIN
name: AspRS_core
description: Aspartate-tRNA ligase, type 1, core domain

phrase: SFVRRFLDDNGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTADQVRATTEKMVREMWQELLNVDLGEFPVMPFSEAIRRFGSDKPDLRNPLELVDVADLVKDVEFKVFSGPANDEKGRVAVIRVPGGAELTRKQIDGYAEFVGIYGAKGLAWMKVNDRAAGMEGIQSPVAKFLNEDVINGILDRTQAESGDIILFGADKANIVAEALGALRLKLGKDLDITKEGTWAPLWVVDFPMFEEDDEGNLHAMHHPFTSPLGVTAEELKANPAAANSNAYDMVLNGYEVGGGSVRIHNAEMQAAVFDILGINAEEQQLKFGFLLDALKFGTPPHAGLAFGLDRLVMLLCGTENIRDVIAF
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: SEEQRLKYRYLDLRRPEMSDRIKLRAKASSFVRRFLDDNGFLDIETPVLTKATPEGARDYLVPSRVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTADQVRATTEKMVREMWQELLNVDLGEFPVMPFSEAIRRFGSDKPDLRNPLELVDVADLVKDVEFKVFSGPANDEKGRVAVIRVPGGAELTRKQIDGYAEFVGIYGAKGLAWMKVNDRAAGMEGIQSPVAKFLNEDVINGILDRTQAESGDIILFGADKANIVAEALGALRLKLGKDLDITKEGTWAPLWVVDFPMFEEDDEGNLHAMHHPFTSPLGVTAEELKANPAAANSNAYDMVLNGYEVGGGSVRIHNAEMQAAVFDILGINAEEQQLKFGFLLDALKFGTPPHAGLAFGLDRLVMLLCGTENIRDVIAFPK
type: DOMAIN
name: Aa-tRNA-synt_II
description: Aminoacyl-tRNA synthetase, class II (D/K/N)

phrase: VELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMADAYEVANTLRNEFCIKLTGEVRVRPESQVNKDMATGEVEILAKGLEI
type: DOMAIN
name: NA-bd_OB_tRNA
description: OB-fold nucleic acid binding domain, AA-tRNA synthetase-type

phrase: FSGPANDEKGRVAVIRVPGGAELTRKQIDGYAEFVGIYGAKGLAWMKVNDRAAGMEGIQSPVAKFLNEDVINGILDRTQAESGDIILFGADKANIVAEA
type: DOMAIN
name: GAD_dom
description: GAD domain
Protein sequence:
MILTFARSLYTQGQYNGKIREYFYYVSHNGFLFLDDSRMKNFTAAYKDIQFLNFFYRKIKENKTGRYEDTFPWVSLCGIERNFLRCDDTPLVYTELDSTEKELRIGQSTIYHSFQPSSLSMNSSGRVYHKCPIGGKALVADKLTDKLYRRFRFDDDGVPVGFQCGEQIIELKK

Annotated regions:
Protein sequence:
MIDIYVLSREALTELVKSWGEPGYRADQLWDWLYNRRVVSFSEMTSLPKGLRDKLAAEVRLGSLELEAEQISRDGTVKRLYRLPDGQLIEAVLMEYDDDRRTACISTQAGCAMGCVFCATGQMGFARHLSADEIFEQAVFFARELEARGERLSNVVLMGMGEPFHNYDASVAAVRRLMNDLGIGARHITISTVGLVPMIRRFAEEGLQVKLAVSLHAATDKERSALLPVNRRYPLNELIDACRDYTERSGRRMSFEWTLIQGQNDTPEQARTLGALLKGVHCHVNVIPLNPTRGYDGDPSSGDRITSFIGILKECGVPATVRIRRGIDIDAGCGQLKSEALRHRRKPSEDMSPD

Annotated regions:
phrase: DDDRRTACISTQAGCAMGCVFCATGQMGFARHLSADEIFEQAVFFARELEARGERLSNVVLMGMGEPFHNYDASVAAVRRLMNDLGIGARHITISTVGLVPMIRRFAEEGLQVKLAVSLHAATDKERSALLPVNRRYPLNELIDACRDYTERSGRRMSFEWTLIQGQNDTPEQARTLGALLKGVHCHVNVIPLNPTRGYDGDPSSGDRITSFIGILKECGVPATVRIRRGI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: DIYVLSREALTELVKSWGEPGYRADQLWDWLYNRRVVSFSEMTSLPKGLRDKLAAEVRLGSLELEAEQISRDGTVKRLYRLPDGQLIEAVLMEYDDDRRTACISTQAGCAMGCVFCATGQMGFARHLSADEIFEQAVFFARELEARGERLSNVVLMGMGEPFHNYDASVAAVRRLMNDLGIGARHITISTVGLVPMIRRFAEEGLQVKLAVSLHAATDKERSALLPVNRRYPLNELIDACRDYTERSGRRMSFEWTLIQGQNDTPEQARTLGALLKGVHCHVNVIPLNPTRGYDGDPSSGDRITSFIGILKECGVPATVRIRRGIDIDAGCGQLKSEALRHRR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: ISTQAGCAMGCVFCATGQMGFARHLSADEIFEQAVFFARELEARGERLSNVVLMGMGEPFHNYDASVAAVRRLMNDLGIGARHITISTVGLVPMIRRFAEEGLQVKLAVSLHAATDKERSALLPVNRRYPLNELIDACRDYTERSGRRMSFEWTLIQGQND
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: DIYVLSREALTELVKSWGEPGYRADQLWDWLYNRRVVSFSEMTSLPKGLRDKLAA
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MSNGYQDSKLKIFSLSSNRPLAEEIAANMGVDLGKSTVTTFSDGEVRISIEESVRGYDVFVIQSTSEPVNQHILELLIMIDTLKRASAKTINIVIPYYGYARQDRKARAREPITAKLVADLLQESGASRIISLDLHAPQIQGFFNIPVDQLAGIPILSRYLEEKNLQDVVVVSPDHGSVSRARQLADHLKAPIAIIDKRGPRETEVGESNIVGNIDGKTAILIDDIVDTGTRMTSGTKALIEKGAKEVYACCTHPVLSGIAMEKIENSQLKELIVTNSIPIADEKKLDRITQLSVAPLLSDAITRVYEERSVSPLFD

Annotated regions:
phrase: DLHAPQIQGFFNIPV
type: CONSERVED_SITE
name: PRib_PP_synth_CS
description: Phosphoribosyl pyrophosphate synthetase, conserved site

phrase: IPILSRYLEEKNLQDVVVVSPDHGSVSRARQLADHLKAPIAIIDKRGPRETEVGESNIVGNIDGKTAILIDDIVDTGTRMTSGTKALIEKGAKEVYACCTHPVLSGIAMEKIENSQLKELIVTN
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: LKIFSLSSNRPLAEEIAANMGVDLGKSTVTTFSDGEVRISIEESVRGYDVFVIQSTSEPVNQHILELLIMIDTLKRASAKTINIVIPYYGYARQDRKARAREPITAKLVADLLQES
type: DOMAIN
name: Pribosyltran_N
description: Ribose-phosphate pyrophosphokinase, N-terminal domain
Protein sequence:
MKKSNFSNVNLSMGTGRRKSSVARVYIREGSGNIRVNNRDFDSYIQLENLRTMALSPLVLTNTLGKYDLYINVYGGGISGQSGAIRHGISRALFELDESNKMILRSNGFLTRDSRRVERKKFGQKKARKSFQFSKR

Annotated regions:
phrase: GGGISGQSGAIRHGISRA
type: CONSERVED_SITE
name: Ribosomal_uS9_CS
description: Small ribosomal subunit protein uS9, conserved site
Protein sequence:
MNNNFQNNIFWQKHSITRLKREKKNGHKSIVLWFTGLSGSGKSTIANFLEEILFKNGINSYLLDGDNIRSGLCSDLSFSLADRNENIRRIGEVVKMMLHAGLIILVSVISPYRNQREMVRQMLGKKNFLEVFIDTPIEICESRDPKKLYKQARTGQISDFTGIQCTYETPNTPDVLLKGTDSLKNNSKKLIKILYNHNIISFINID

Annotated regions:
Protein sequence:
MNIIQSGITAENSSIAIIIARFNEFINKNLLLGALDTLKRIGQVHEENILKIYVPGTYEIPTIASYIAKSGKYDAIIAIGTIIKGQTDHFKYIANDTSSSLSRISTQYFLPITLGILTTKNIEQSIERSGTKMGNKGSDAALAALEMINVMKKLKKVIYY

Annotated regions:
Protein sequence:
MATGRAKNTKWARWLSTAGLIIVVTLPATTMAAERTGLKATAWKPLCKLTTELSKVSGEMLNKGQEVISNIQKIKAAEYKVSIYLAKNPETQALQQSTLLRGYFARKTNGGLESYKTMGLATQIRSARAAAYLKGSIDEFLNLLESLKGGSENKCLVTTNADTAATRRETKLDDQECALSMPETKPEAATRTELTQTGYPNLQHGGGGTANTFQPTTSTGTCKLLSGHSTNGYPTTSALDTTAKVLAGYMTIPNTQVEATLANMQAMGNGHKATAPAWHEAWEARNREAKAKDLAYTNETGNLDTQPTLKALVKTLLLPKDNTEHNAEATKLEALFGGLAADKTKTYLDMVDAEIIPAGIAGRTTEAPLGKIHDTVELGDILSNYEMIAAQNVVTLKKNLDAVSKKQQTESAENKEKICNAAKDNQKACENLKEKGCVFNTESNKCELKKDVKEKLEKESKETEGKDEKANTTGSNSFLIHKAPLLLAFLLF

Annotated regions:
phrase: LIIVVTLPATTMAAERTGLKATAWKPLCKLTTELSKVSGEMLNKGQEVISNIQKIKAAEYKVSIYLAKNPETQALQQSTLLRGYFARKTNGGLESYKTMGLATQIRSARAAAYLKGSIDEFLNLLESLKGGSENKCLVTTNADTAATRRETKLDDQECALSMPETKPEAATRTELTQTGYPNLQHGGGGTANTFQPTTSTGTCKLLSGHSTNGYPTTSALDTTAKVLAGYMTIPNTQVEATLANMQAMGNGHKATAPAWHEAWEARNREAKAKDLAYTNETGNLDTQPTLKALVKTLLLPKDNTEHNAEATKLEALFGGLAADKTKTYLDMVDAEIIPAGIAGRTTEAPLGKIHDTVELGDILSNY
type: DOMAIN
name: Trypano_VSG_A_N_dom
description: Trypanosome variant surface glycoprotein, A-type, N-terminal domain
Protein sequence:
MTTILRIDSSIKGEAAVSRRLTQRILDRLLEAHPDATVVSRDLAQGIRQIDGSWLGSVFTAPEQRTADQQEIARTADAVMAEVKEADILVIALPVYNFGAPAQLKSWVDHIARRGESFVYTETGPVGLLTGKRAIVAFTSDGTPLGSELDHASGWLRQVLGFVGITDVDFVAADRMVFGADEAMARAEAAVAALAA

Annotated regions:
phrase: TILRIDSSIKGEAAVSRRLTQRILDRLLEAHPDATVVSRDLAQGIRQIDGSWLGSVFTAPEQRTADQQEIARTADAVMAEVKEADILVIALPVYNFGAPAQLKSWVDHIARRGESFVYTETGPVGLLTGKRAIVAFTSDGTPLGSELDHASGWLRQVLGFVGITDVDFVAADRMVFGADEAMARAEAAV
type: DOMAIN
name: Flavodoxin_fold
description: Flavodoxin-like fold
Protein sequence:
MTPKKLNFITGNKNKLIEVRAILGNAIEIDNQNIDVPEIQGSIEEIAREKCKHAAEVTGGPVLTEDTALEFRGLNGLPGPYIKSFLHALGHEGLNKILDSFEDKSGEAICTFAFSDGPGSEPVLFQGRTKGTIVRPRGPSNFGWDPIFEYKGKTYAEMDKEEKNQISHRYKALEKLQRWLSEG

Annotated regions:
Protein sequence:
MAWVLSMDEVIESGLVHDFDSSLSGIGQELGAGAYSMSDVLALPIFKQEDSSLSLEDEAKHPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPELSGKLVKSIIRVVFHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPAKRTSAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKPKGADRKQKNDREKMEKRTAHEKEKYQPSYDTTILTEMRLEPIIEDAVEHEQKKSSKRTLPADYGDSLAKRGSCSPWPDTPTAYVNNSPSPAPTFTSSQPSTCSVPDSNSSSPNHQGDGAAQASGEQIQPSATTQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICGAADGIRLYNSLKSRSVRPRLTIYVCQEQPSSTALQGQPQAAGSGGESGGGTPSVYHAIYLEEMVASEVARKLASVFNIPFHQINQVYRQGPTGIHILVSDQMVQNFQDETCFLFSTVKAENNDGIHIILK

Annotated regions:
phrase: TTQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICGAADGIRLYNSLKSRSVRPRLTIYV
type: DOMAIN
name: Ubp1_SAM
description: Upstream-binding protein 1, SAM domain

phrase: QIQPSATTQETQQWLLKNRFSSYTRLFSNFSGADLLKLTKEDLVQICGAADGIRLYNSL
type: DOMAIN
name: SAM_3
description: SAM domain

phrase: EAKHPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPELSGKLVKSIIRVVFHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPAKRTSAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKPKGADRKQKNDREKMEKR
type: DOMAIN
name: CP2
description: CP2 transcription factor

phrase: KHPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMPELSGKLVKSIIRVVFHDRRLQYTEHQQLEGWKWNRPGDRLLDLDIPMSVGIIDTRTNPSQLNAVEFLWDPAKRTSAFIQVHCISTEFTPRKHGGEKGVPFRIQVDTFKQNENGEYTDHLHSASCQIKVFKPKGADRKQKNDREKMEKRTAHEKEKYQPSYDTTILTEMRLEPIIEDAVEHEQKKSSKRT
type: DOMAIN
name: CP2
description: CP2 transcription factor
Protein sequence:
MKFAIESISKNSGRLGQLRIKDGGPDFKTPLLLQTTKGGSIPWLSADVFESHVSQKPQVLQFTLSTMDHMTEALTHWNSGGGRGLSDYVGLPGHLNILMLRDPCETTPSGGNDRDILPLFTRRGKESLSSERYMEMVASFKPDFYEGLCDADTNLESAKKRIQKSVDRTEKFMHYIYEHRGKVNSTLLAPIVGGYNTFARTQSIKHAREQPAGSYGGYIFEGFHTNGLSATTLDTSKLLPIVEHCVKQLEEDKPRLMPGAYTPLTILELIRQGIDMFDSSYAYCASLNFKALTFSFVQDAVEHAPFLDITDEAIKEDFTPPLSNCSCLTCQKHTRAYLHHLYKTNELLGPILLIVHNLHHYMAFFEKIRESVARDELPRLTEFVRNQNGKTQVDYSIAANTKVISKAAMGKGFAAAAV

Annotated regions:
phrase: GRLGQLRIKDGGPDFKTPLLLQTTKGGSIPWLSADVFESHVSQKPQVLQFTLSTMDHMTEALTHWNSGGGRGLSDYVGLPGHLNILMLRDPCETTPSGGNDRDILPLFTRRGKESLSSERYMEMVASFKPDFYEGLCDADTNLESAKKRIQKSVDRTEKFMHYIYEHRGKVNSTLLAPIVGGYNTFARTQSIKHAREQPAGSYGGYIFEGFHTNGLSATTLDTSKLLPIVEHCVKQLEEDKPRLMPGAYTPLTILELIRQGIDMFDSSYAYCASLNFKALTFSFVQDAVEHAPFLDITDEAIKEDFTPPLSNCSCLTCQKHTRAYLHHLYKTNELLGPILLIVHNLHHYMAFFEKIRESVARDELPRLTEF
type: DOMAIN
name: tRNA_ribo_trans-like
description: tRNA-guanine(15) transglycosylase-like

phrase: SLSSERYMEMVASFKPDFYEGLCDADTNLESAKKRIQKSVDRTEKFMHYIYEHRGKVNSTLLAPIVGGYNTFARTQSIKHAREQPAGSYGGYIFEGFHTNGLSATTLDTSKLLPIVEHCVKQLEEDKPRLMPGAYTPLTILELIRQGIDMFDSSYAYCASLNFKALTFSFVQDAVEHAPFLDITDEAIKEDFTPPLSNCSCLTCQKHTRAYLHHLYKTNELLGPILLIVHNLHHYMAFFEKIRESVARDELPRLTEFVRNQ
type: DOMAIN
name: tRNA_ribo_trans-like
description: tRNA-guanine(15) transglycosylase-like
Protein sequence:
MAEAEGESLESWLNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEWEAVQALTVLEACMKNCGRRLHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKAKVIELLFSWTLALPEEAKIKDAYHMLKRQGIVQSDPPIPMDRTLIPSPPPRPKNPVFDDEEKSKLLAKLLRSKNPDDLQEANQLIKSMVKEDEARIQKVTKRLHTLEEVNNNVKLLHEMLLHYSQEFSSEADKELMKELFDRCENKRRTLFKLASETEDNDNSLGDILQASDNLSRVINSYKTIIEGQIINGEVTTSTVPDSEGNSHCGNQGALIDLAELDTPSSSSPVLAPAPAPPTSGIPILPPPPQTSGPPRSRSSSQAEAPSGPDSTNNALSLLDEELLCLGLSDPAPTAPKESAGNSPWHLFQNEPSSDLDFFSPRLVSAASCPSEGSLLPPPVSTSSLSQAPLPAAFPAPVVPASAVTHSTGSFTFSSGPAPALVPKAEPEGPEYPSSSISHRLDALDQLLEEAKVTSGLVKPVSCFSPGPTASPLLPASTPARPLLPFSTGPGSPLFQSPAFQSQGSPQKGPELSLASVHVPLESIKPSSALPVTAYDKNGFRILFHFAKECPPGRPDVLVVVVSMLNTAPLPVKSIVLQAAVPKSMKVKLQPPSGTELSPFSPIQPPAAITQVMLLANPMKEKVRLRYKLTFALGEQLSTELGEVDQFPPVEQWGNL

Annotated regions:
phrase: GESLESWLNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEWEAVQALTVLEACMKNCGRRLHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKAKVIELLFSWTLALPEEAKIKDAYHMLKRQGIVQ
type: DOMAIN
name: VHS_GGA3
description: GGA3, VHS domain

phrase: ATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEWEAVQALTVLEACMKNCGRRLHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKAKVIELLFSWTLALPEEAKIKDAYHMLKRQGIVQ
type: DOMAIN
name: VHS_dom
description: VHS domain

phrase: PVTAYDKNGFRILFHFAKECPPGRPDVLVVVVSMLNTAPLPVKSIVLQAAVPKSMKVKLQPPSGTELSPFSPIQPPAAITQVMLLANPMKEKVRLRYKLTFALGEQLSTELGEVDQF
type: DOMAIN
name: Clathrin_a/b/g-adaptin_app_Ig
description: Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain

phrase: LESWLNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEWEAVQALTVLEACMKNCGRRLHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKAKVIELLFSWTLALPEEAKIKDAYHMLKRQ
type: DOMAIN
name: VHS_dom
description: VHS domain

phrase: FDDEEKSKLLAKLLRSKNPDDLQEANQLIKSMVKEDEA
type: DOMAIN
name: GGA_N-GAT
description: N-terminal extension of GAT domain

phrase: IKPSSALPVTAYDKNGFRILFHFAKECPPGRPDVLVVVVSMLNTAPLPVKSIVLQAAVPKSMKVKLQPPSGTELSPFSPIQPPAAITQVMLLANPMKEKVRLRYKLTFALGEQLSTELGEVDQF
type: DOMAIN
name: Clathrin_a/b/g-adaptin_app_Ig
description: Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain

phrase: KRLHTLEEVNNNVKLLHEMLLHYSQEFSSEADKELMKELFDRCENKRRTLFKLASETEDNDNSLGDILQASDNLSRVINSYKTIIE
type: DOMAIN
name: GAT_GGA3
description: GGA3, GAT domain

phrase: EGESLESWLNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEWEAVQALTVLEACMKNCGRRLHNEVGKFRFLNELIKVVSPKYLGDRVSEKVKAKVIELLFSWTLALPEEAKIKDAYHMLKRQ
type: DOMAIN
name: VHS_dom
description: VHS domain

phrase: DEEKSKLLAKLLRSKNPDDLQEANQLIKSMVKEDEARIQKVTKRLHTLEEVNNNVKLLHEMLLHYSQEFSSEADKELMKELFDRCENKRRTLFKLASETEDNDNSLGDILQASDNLSRVINSYKTII
type: DOMAIN
name: GAT_dom
description: GAT domain

phrase: NNNVKLLHEMLLHYSQEFSSEADKELMKELFDRCENKRRTLFKLASETEDNDNSLGDILQASDNLSRVINSYKTIIE
type: DOMAIN
name: GAT_dom
description: GAT domain

phrase: SSALPVTAYDKNGFRILFHFAKECPPGRPDVLVVVVSMLNTAPLPVKSIVLQAAVPKSMKVKLQPPSGTELSPFSPIQPPAAITQVMLLANPMKEKVRLRYKLTFALGEQLSTELGEVDQF
type: DOMAIN
name: GAE_dom
description: Gamma-adaptin ear (GAE) domain
Protein sequence:
MNNLLLRSSADIIALVPAAGIGSRMNSDCPKQYLSIAGKTIIEHTLSALLDHPRIRHVVIVLNPTDTQFQSLEVVSDSRITTVTGGEQRADSVLAGLNHLAHVTGNDNCWVLVHDAARPCLHHDDLDRLLQLAEADEQGNMACGGILASPVRDTMKRGRVGQIIDHTVERQDLWHALTPQFFPLMLLRDCLSKALSQHANITDEASALEYCGYQPVLVNGRSDNIKVTCPEDLALAEFYLSRK

Annotated regions:
phrase: VLVHDAA
type: CONSERVED_SITE
name: ISPD_synthase_CS
description: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site
Protein sequence:
MEILPVGEESLGVRSMCLYVETRDVRILFDAGVSLAPRRFGLPPHPRELERARAVRSEILRLAAAADVITVSHYHRDHFTPWYPSVYMATDGETYRQIYGGKRVLLKSPDDLNWSQRRRHYGLSKALGDAGAELIYADGGEWRVGGTVIKASQSLWHGPAGSKTGRVVAFAVLDGEERLAFVPDVEGPVEPEPVAFLKEVRPTIAVVGGPPTYLPWDIEAAIRHLREVVDLAPRVLVVAHHALRSGDWREKLAPLFEYAEKRGVEIATYASLRGVGEELLEASRKELYKREPAEALVFEEEEE

Annotated regions:
Protein sequence:
MSGGLDILSLKEDDVTKMLGAQTHIGSENSDYQMEQYVYKRRNDGVHILNLRRTWEKLLLAARAIVAIEHPADVFVISSRPIGQRAVLKFASYTGATPIAGRFTPGAFTNQIQAAFREPRLLVVTDPHTDHQPITEAAYVNIPVIAFCNTESPLRFVDIAIPCNNKSPHSIGLMWWLLAREVLRFRGTIPREPKWDVVVDLFFYRDPEEAEKEEQAGKESAAAIADKPADEFAAHAPTESWNDTVVPSADLAPQSWAEESASIPQYAPAPQAAAAPVADDWTTPVGADDWGQDWSNSTSQW

Annotated regions:
phrase: FFYRDPEEAEKEEQAGKESAAAIADKPADEFAAHAPTESWNDTVVPSADLAPQSWAEESASIPQYAPAPQAAAAPVADDWTTPVGADDWGQ
type: DOMAIN
name: Ribosomal_uS2_C
description: Small ribosomal subunit protein uS2, C-terminal domain

phrase: VTKMLGAQTHI
type: CONSERVED_SITE
name: Ribosomal_uS2_CS
description: Small ribosomal subunit protein uS2, conserved site

phrase: PRLLVVTDPHTDHQPITEAAYVNI
type: CONSERVED_SITE
name: Ribosomal_uS2_CS
description: Small ribosomal subunit protein uS2, conserved site
Protein sequence:
MSEQKQDVAATEEQQPVLQIQRIYVKDVSFEAPNLPHIFQQEWKPKLGFDLSTETTQVGDDLYEVVLNISVETTLEDSGDVAFICEVKQAGVFTISGLEDVQMAHCLTSQCPNMLFPYARELVSNLVNRGTFPALNLSPVNFDALFVEYMNRQQAENAEEKSEEEQTKH

Annotated regions:
Protein sequence:
MGETVTIQKNWQELIRPNKLQVTPGSDPARFATIVAEPLERGFGQTLGNALRRILLSSLQGAAVQSVHIDGVLHEFSSIAGVREDVTDIVLNIKDISIKMQGEGPKRMVVKKQGPGVVTAGDIQTVGDVVVLNPDLQICTLDEGAEIRMEFTVATGKGYVPAERNRPEDAPIGLIPVDSLYSPVRKVSYKVENTREGQILDYDKLTMTIETNGAISPDDSVAYAARILQDQLNVFVNFEEPRKEVAQEIIPDLAFNPAFLKKVDELELSVRSANCLKNDNIVYIGDLVQKSEAEMLRTPNFGRKSLNEIKEVLAQMGLHLGMEVPGWPPENIDELAKRFEDHY

Annotated regions:
phrase: FLKKVDELELSVRSANCLKNDNIVYIGDLVQKSEAEMLRTPNFGRKSLNEIKEVL
type: DOMAIN
name: RNAP_asu_C
description: RNA polymerase, alpha subunit, C-terminal

phrase: FATIVAEPLERGFGQTLGNALRRILLSSLQGAAVQSVHIDGVLHEFSSIAGVREDVTDIVLNIKDISIKMQGEGPKRMVVKKQGPGVVTAGDIQTVGDVVVLNPDLQICTLDEGAEIRMEFTVATGKGYVPAERNRPEDAPIGLIPVDSLYSPVRKVSYKVENTREGQILDYDKLTMTIETNGAISPDDSVAYAARILQDQLNVFVN
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: EPLERGFGQTLGNALRRILLSSLQGAAVQSVHIDGVLHEFSSIAGVREDVTDIVLNIKDISIKMQGEGPKRMVVKKQGPGVVTAGDIQTVGDVVVLNPDLQICTLDEGAEIRMEFTVATGKGYVPAERNRPEDAPIGLIPVDSLYSPVRKVSYKVENTREGQILDYDKLTMTIETNGAISPDDSVAYAARILQDQ
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: VHIDGVLHEFSSIAGVREDVTDIVLNIKDISIKMQGEGPKRMVVKKQGPGVVTAGDIQTVGDVVVLNPDLQICTLDEGAEIRMEFTVATGKGYVPAERNRPEDAPIGLIPVDSLY
type: DOMAIN
name: DNA-dir_RNA_pol_insert
description: DNA-directed RNA polymerase, insert domain
Protein sequence:
MKEQHNALQLMMLGLQHMLAMYAGAILVPLIVGAAIGLNAGQLTYLIAIDLFMCGAATLLQLWRNRYFGIGLPVVLGCTFTAVGPMISIGSTYGVPAIYGAIIAAGLIVVLAAGFFGKLVRFFPPVVTGSVVMIIGISLIPTAMNNLAGGEGSKEFGSLDNVLLGFGVTAFILLLFYFFKGFIRSIAILLGLIAGTAAAYFMGKVDFSEVLEASWLHVPSLFYFGPPTFELPAVVTMLLVAIVSLVESTGVYFALADITNRRLSEKDLEKGYRAEGLAILLGGLFNAFPYTAFSQNVGIVQLSKMKSVNVIAITGIILVAIGLVPKAAALTTVIPTPVLGGAMIVMFGMVISYGIKMLSSVDLDSQGNLLIIASSVSLGLGATTVPALFSSLSGAASVLAGSGIVIGSLTAIALHAFFQTKQPNSADIKT

Annotated regions:
Protein sequence:
MTHYILAIDQGTTSSRAILFDEKGSRVGQSQQEFPQIFPDDGWVEHDPEDIWSSTLAVCRSVLKDTGIDAQAIATIGITNQRETTILWDIDTGKPVYNAIVWQDRRTSGFCQSLSDQGLSEKVQEKTGLLIDPYFSATKIRWILDNVDGARETAQSGRLAFGTVDSFLLWRLTNGKSHKTDATNAARTMAFNIHTQEWDDELIELLGIGDVLFPEVMDCSADFGVIDASWLGAEIPVNGIAGDQQAALVGQACFTPGMVKSTYGTGCFMILNTGDKAIRSEHKLLTTVGYRLNGKVTYALEGSIFVAGAAIQWLRDGLKLFADAKETQSLAKQALNDDSVYLVPAFTGLGAPYWDPDARGAMIGLTRDTSVADIVSAGLRSVCYQTKDLVGAMAQDGATFSSLRVDGGMVINDVMVQFLSDLLEITVERPCVTETTALGAAFLAGLQVGLYQSLDEIEVLWKADKCFEPTMEKGTGDKLYQGWQKAVDRVRTRD

Annotated regions:
phrase: YFSATKIRWILD
type: CONSERVED_SITE
name: Carb_kinase_FGGY_CS
description: Carbohydrate kinase, FGGY, conserved site

phrase: YILAIDQGTTSSRAILFDEKGSRVGQSQQEFPQIFPDDGWVEHDPEDIWSSTLAVCRSVLKDTGIDAQAIATIGITNQRETTILWDIDTGKPVYNAIVWQDRRTSGFCQSLSDQGLSEKVQEKTGLLIDPYFSATKIRWILDNVDGARETAQSGRLAFGTVDSFLLWRLTNGKSHKTDATNAARTMAFNIHTQEWDDELIELLGIGDVLFPEVMDCSADFGVIDASWLGAEIPVNGIAGDQQAALV
type: DOMAIN
name: FGGY_N
description: Carbohydrate kinase FGGY, N-terminal

phrase: STYGTGCFMILNTGDKAIRSEHKLLTTVGYRLNGKVTYALEGSIFVAGAAIQWLRDGLKLFADAKETQSLAKQALNDDSVYLVPAFTGLGAPYWDPDARGAMIGLTRDTSVADIVSAGLRSVCYQTKDLVGAMAQDGATFSSLRVDGGMVINDVMVQFLSDLLEITVERPCVTETTALGAAFLAG
type: DOMAIN
name: FGGY_C
description: Carbohydrate kinase FGGY, C-terminal
Protein sequence:
MTNIRKNHPLMKIINHSFIDLPSPSNISSWWNFGSLLGLCLMIQIITGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFLCLFIHVGRGLYYGSFTLLDTWNIGVMLLLAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMNLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVMIHLIFLHETGSNNPSGISSDSDKIPFHPYYSFKDLLGAVFLLTTLSVLVLFSPDLLGDPDNYTPANPLITPPHIKPEWYFLFAYAILRSIPNKLGGVMALAMSILILALIPHLHTAKQRSVMFRPLSQCLFWVLVANLLTLTWIGGQPVENPFIIIGQTASILYFLTILVLMPLTSLFENKLLKW

Annotated regions:
phrase: IDLPSPSNISSWWNFGSLLGLCLMIQIITGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFLCLFIHVGRGLYYGSFTLLDTWNIGVMLLLAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMNLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVMIHLIFLHET
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: PLMKIINHSFIDLPSPSNISSWWNFGSLLGLCLMIQIITGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFLCLFIHVGRGLYYGSFTLLDTWNIGVMLLLAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMNLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVMIHLIFLHETGS
type: DOMAIN
name: Cytochrome_b_N_euk/bac
description: Cytochrome b/b6, N-terminal domain, eukaryotic/bacterial

phrase: NPSGISSDSDKIPFHPYYSFKDLLGAVFLLTTLSVLVLFSPDLLGDPDNYTPANPLITPPHIKPEWYFLFAYAILRSIPNKLGGVMALAMSILILALIPHLHTAKQRSVMFRPLSQCLFWVLVANLLTLTWIGGQPVENPFIIIGQT
type: DOMAIN
name: Cytochrome_b_C_euk/bac
description: Cytochrome b/b6, C-terminal domain, eukaryotic/bacterial

phrase: GISSDSDKIPFHPYYSFKDLLGAVFLLTTLSVLVLFSPDLLGDPDNYTPANPLITPPHIKPEWYFLFAYAILRSIPNKLGGVMALAMSILILALIPHLHTAKQRSVMFRPLSQCLFWVLVANLLTLTWIGGQPVENPFIIIGQTASILYFLTILVLMPLTSLFENKLLK
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: PANPLITPPHIKPEWYFLFAYAILRSIPNKLGGVMALAMSILILALIPHLHTAKQRSVMFRPLSQCLFWVLVANLLTLTWIGGQPVENPFIIIGQTASILY
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: MTNIRKNHPLMKIINHSFIDLPSPSNISSWWNFGSLLGLCLMIQIITGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYLHANGASMFFLCLFIHVGRGLYYGSFTLLDTWNIGVMLLLAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGMNLVEWIWGGFSVDKATLTRFFAFHFILPFIITALVMIHLIFLHETGSNNP
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain
Protein sequence:
MINYLKFNRFCFSKKKFFHKCNLPYLLHNQIGSYNSFLSSKYNSLFSIKKVLKQYFPLICNNKNIFIKLKKIELLEPCNTEKYTKIRNLHLFSTLYMYISIYVINKNLNVYKKIFLGNIPSMTKKGNFIINGIDRILISQFTKSYGIYFYTEKKKKKCIIIPLKGSWLEFIITNNFLIVFDKKINFEINVFLICLGYNKKYFFNFFFFKIKIKIIRGKKRIFFLLNKKKYFYKIYNKYICISIKKILGKLFGKNYFLKKNTFLKFNIIDINKVNLILNYPIYFFFIIFLKKIINLNYLIYIYKNFKLKINKELLQYKKGYIINFFRNLFYKKKYFYSLIGAKRIFKRLFLKKNNKLTIYLEIIKKILKFIKFNIQNDNFDNLENKLILNCGKLLSIKFDFLFKKVIKFINYKMNNFKKYKDLDFIVNSDIITIGLKDYFCNNELSQFLDQNNPLAEISHNRKISLISGIGIEKENCGFDIRDIHYSHYCKVCPIDTPEGHNIGLINSLAYLSKVNKYNFISTIYKISILGKILGITFLDNKFDKHKFIVNFNSTIETIYGEIFRSPYFEARKTNYYYYKKFLNIDLIEICGDQIISVGASLIPFLSHNDANRCLMGSNMQRQAVPLIDSENPIVGTGNELEIGLNSNYNILSDLNGYVLYSDNYKIIIKNNNFIKTYFLEKYTRTNQNTILNQYTKVLKGDFVKVGNIIADSNSTKNGEISLGKNLRVAFMSWYGYNFEDSILLSSSILNKNNFNSIHIYEFITVLKYNENGFEIVSNECFGSNEKIKNKVKNGIIKIGEFVFSKDVIVGKMIPKKKRKFSPEEKLFKIVFSESNFNYYEQPLTVPKNIKGTIIAVNDFKIFYFKNKIFKLLKFEQLNYTCKNINNFFYETFNYYLTKIKKLLFNNKITIKKKRINSYNININNIFKIKCFNKKINFKLNIFKNIISNELLKKKNIFVYKKINFIKHDDFENSIIRIIKIKIAVKKQIAIGDKMSGRHGNKGVVSNIIDYENMPYDKFGNKIDLILNPLGVPSRMNVGQLLEVFLAGSLNLIKSFFLKIKNLNKISYFKMKLFIKIIFKCIYDKNINLNIFNNSLVLKIFKNIKNQLNVCVHNFYNFNVNKVNNIIKTIGINKNCELLLFDGITGKRYLQLVNVGYIYFMKLNHLVIDKIYSRSIGPYSIVTQQPLGGKSNLGGQRLGEMEVWALEAYGAAFLLKEMLTIKSDDILGRIELYKNIIKGINDANSGIPESFQVLMKEIQSLCFDIKIL

Annotated regions:
phrase: GDKMSGRHGNKG
type: CONSERVED_SITE
name: RNA_pol_bsu_CS
description: RNA polymerase, beta subunit, conserved site

phrase: LLHNQIGSYNSFLSSKYNSLFSIKKVLKQYFPLICNNKNIFIKLKKIELLEPCNTEKYTKIRNLHLFSTLYMYISIYVINKNLNVYKKIFLGNIPSMTKKGNFIINGIDRILISQFTKSYGIYFYTEKKKKKCIIIPLKGSWLEFIITNNFLIVFDKKINFEINVFLICLGYNKKYFFNFFFFKIKIKIIRGKKRIFFLLNKKKYFYKIYNKYICISIKKILGKLFGKNYFLKKNTFLKFNIIDINKVNLILNYPIYFFFIIFLKKIINLNYLIYIYKNFKLKINKELLQYKKGYIINFFRNLFYKKKYFYSLIGAKRIFKRLFLKKNNKLTIYLEIIKKILKFIKFNIQNDNFDNLENKLILNCGKLLSIKFDFLFKKVIKFINYKMNNFKKYKDLDFIVNSDII
type: DOMAIN
name: RNA_pol_bsu_protrusion
description: RNA polymerase, beta subunit, protrusion

phrase: SDLNGYVLYSDNYKIIIKNNNFIKTYFLEKYTRTNQNTILNQYTKVLKGDFVKVGNIIADSNSTKNGEISLGKNLRVAFMSWYGYNFEDSILLSSSILNKNNFNSIHIYEFITVLKYNENGFEIVSNECFGSNEKIKNKVKNGIIKIGEFVFSKDVIVGKMIPKKKRKFSPEEKLFKIVFSESNFNYYEQPLTVPKNIKGTIIAVNDFKIFYFKNKIFKLLKFEQLNYTCKNINNFFYETFNYYLTKIKKLLFNNKITIKKKRINSYNININNIFKIKCFNKKINFKLNIFKNIISNELLKKKNIFVYKKINFIKHDDFENSIIRIIKIKIAVKKQIAIGDKMSGRHGNKGVVSNIIDYENMPYDKFGNKIDLILNPLGVPSRMNVGQLLEVFLAGSLNLIKSFFLKIKNLNKISYFKMKLFIKIIFKCIYDKNINLNIFNNSLVLKIFKNIKNQLNVCVHNFYNFNVNKVNNIIKTIGINKNCELLLFDGITGKRYLQLVNVGYIYFMKLNHLVIDKIYSRSIGPYSIVTQQPLGGK
type: DOMAIN
name: DNA-dir_RNAP_su2_dom
description: DNA-directed RNA polymerase, subunit 2, hybrid-binding domain

phrase: QFLDQNNPLAEISHNRKISLISGIGIEKENCGFDIRDIHYSHYCKVCPIDTPEGHNIGLINSLAYLSK
type: DOMAIN
name: RNA_pol_Rpb2_3
description: RNA polymerase Rpb2, domain 3

phrase: GGQRLGEMEVWALEAYGAAFLLKEMLTIKSDDILGRIELYKNIIKGINDANSGIPESFQVLMKEIQSLCFDIK
type: DOMAIN
name: RNA_pol_Rpb2_7
description: RNA polymerase Rpb2, domain 7
Protein sequence:
MGKLQDGIAIKRINDAITTFKNYKLGELEQGGSMAINTLSNVRAHVGLAWPAILRNCLIHTSSHLGFMKFMIDIATTWKVGAFTLLGSVGDEDPFTDVDLIYTKTCLHLGLKDNDFLQFPEEFAYEANSFLEAQSMNARVDMLTGVHNIEDKYVFRMQSISKFLKAYYTASEDVAYLTGFIKPDDSKDSILSAELLKAQVTSEVLRVRNLITTKIQKYINLYEDSQLPHFRQAALSYTQDWDVDGGVPAALPQPDTTDDENPVANPGPSAPTVSKGADQPEDEEMIRKKVETSKDGPPKAVPSGNVSARGFPAFLEDDMSEMDAPDGFHDYLTREHENNFDLTQLGLAPSV

Annotated regions: