nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
METSRSRGGGGAVSERGGAGASVGVCRRKAEAGAGTGTLAADMDLHCDCAAETPAAEPPSGKINKAAFKLFKKRKSGGTMPSIFGVKNKGDGKSSGPTGLVRSRTHDGLAEVLVLESGRKEEPRGGGDSGGGGGGRPNPGPPRAAGPGGGSLASSSVAKSHSFFSLLKKNGRSENGKGEPVDASKAGGKQKRGLRGLFSGMRWHRKDKRAKAEAAEGRAPGGGLILPGSLTASLECVKEETPRAAREPEEPSQDAPRDPAGEPAGGEEVPAPADRAPARSCREAEGLAHPGDTGARGEDAAGHRRAEPGPGEVRTAEDASRTGAVPVKTVPLVDSEGGSGRAPAAPDPASVDPPSDPSADRICLMFSDVTSLKSFDSLTGCGDIIADQEEEAGPSCDKHVPGPGKPALSKKNPGVVAYQGGGEEMASPDEVDDTYLQEFWDMLSQTEEQGPEPQEGAAKVAAALETKVVPETPKDTRCVEAAKDASSVKRRRLNRIPIEPHPKEEPKHPEKEQQEGVPNSDEGYWDSTTPGPEEDSSSSGKKAGIPRDSYSGDALYDLYADPDGSPATLPGGKDNEETSSLSRLKPVSPGTITCPLRTPGSLLKDSKIPISIKHLTNLPSSHPVVHQQPSRSEMPRTKIPVSKVLVRRVSNRGLAGTTIRATACHDSAKKL

Annotated regions:
Protein sequence:
MTVTIATLGFPRIGPKRELKFALEAYWAGKTDADALLDTARDLRAKTWTRQAALGVAHVPSNDFSLYDHVLDTAVMVGAIPAAYGWSGGTVDLATYFAMARGDQGRPAAEACGPGCGHAPGADGVPALEMTKWFDTNYHYLAPELSPGQAFALTSSKPVDEFLEAKALGVHTRPVLLGPVTFLKLAKTKAEGFSPLSLLSALLPVYGQVLRGLAAAGADWVQIDEPCLALDLTDFERAELRRAYGALTHAAPGVRLMLTSYFGGYGENLATAVNLPVEGLHLDLVRAPDELEAALAASRESLVLSLGVIDGRNVWRADLPALLDRLEPVVARRGSDRVVLAPSCSLLHTPIDLDLETALDPEIRQWLAFAVQKVEALAVLAQALNGGRASVAAALEASAQAARARATSPRIHDPKVAERLAAVTPDMTRRRSPYDQRREAQRARLNLPPLPTTTIGSFPQTTEVRQARAAFAKGQISDATYEAFLRQETARAVAWQETVGLDVLVHGEFERNDMVQYFGEQLAGFAFTQSGWVQSYGSRCVRPPILFGDVSRPAPMTVDWWRYAQGLTRRPMKGMLTGPVTILNWSFVRDDLPRETACRQIALAIRDEVVDLEATGAAIIQIDEAALREGLPLRRGDWDAYLDWAVESFRLAASGVADATQIHTHMCYSEFNDIIAAIGAMDADVISIETARSKMELLDAFVGYAYPAQIGPGVYDIHSPRVPAVEEMTTLLAAARQRLAGEQLWVNPDCGLKTRKWPETQAAIVNMV

Annotated regions:
phrase: ATLGFPRIGPKRELKFALEAYWAGKTDADALLDTARDLRAKTWTRQAALGVAHVPSNDFSLYDHVLDTAVMVGAIPAAYGWSGGTVDLATYFAMARGDQGRPAAEACGPGCGHAPGADGVPALEMTKWFDTNYHYLAPELSPGQAFALTSSKPVDEFLEAKALGVHTRPVLLGPVTFLKLAKTKAEGFSPLSLLSALLPVYGQVLRGLAAAGADWVQIDEPCLALDLTDFERAELRRAYGALTHAAPGVRLMLTSYFGGYGENLATAVNLPVEGLHLDLVRAPDELEAALAASRESLVLSLGVIDGRNVWRADLPALLDRLEPVV
type: DOMAIN
name: Cbl-indep_Met_Synth_N
description: Cobalamin-independent methionine synthase MetE, N-terminal

phrase: PTTTIGSFPQTTEVRQARAAFAKGQISDATYEAFLRQETARAVAWQETVGLDVLVHGEFERNDMVQYFGEQLAGFAFTQSGWVQSYGSRCVRPPILFGDVSRPAPMTVDWWRYAQGLTRRPMKGMLTGPVTILNWSFVRDDLPRETACRQIALAIRDEVVDLEATGAAIIQIDEAALREGLPLRRGDWDAYLDWAVESFRLAASGVADATQIHTHMCYSEFNDIIAAIGAMDADVISIETARSKMELLDAFVGYAYPAQIGPGVYDIHSPRVPAVEEMTTLLAAARQRLAGEQLWVNPDCGLKTRKWPETQAAIVNM
type: DOMAIN
name: Met_Synth_C/arc
description: Cobalamin-independent methionine synthase MetE, C-terminal/archaeal

phrase: LPTTTIGSFPQTTEVRQARAAFAKGQISDATYEAFLRQETARAVAWQETVGLDVLVHGEFERNDMVQYFGEQLAGFAFTQSGWVQSYGSRCVRPPILFGDVSRPAPMTVDWWRYAQGLTRRPMKGMLTGPVTILNWSFVRDDLPRETACRQIALAIRDEVVDLEATGAAIIQIDEAALREGLPLRRGDWDAYLDWAVESFRLAASGVADATQIHTHMCYSEFNDIIAAIGAMDADVISIETARSKMELLDAFVGYAYPAQIGPGVYDIHSPRVPAVEEMTTLLAAARQRLAGEQLWVNPDCGLKTRKWPETQAAIVNM
type: DOMAIN
name: Met_Synth_C/arc
description: Cobalamin-independent methionine synthase MetE, C-terminal/archaeal
Protein sequence:
MKKQTAKRAALTGALAASLLVLPSLSGGASALAQKAERDSQALSYGDLIQKVQSGEIARVELDETEQVARVYLKDQKPDTQPQQVRLLEQNPELINKLKERKVEFEEVSSANSRAAVSLLINLMWILPLVALMLLFLRRSTNASSQAMNFGKSRARFQMEAKTGVKFDDVAGIEEAKEELQEVVTFLKQPEKFTAVGARIPKGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDAALLRPGRFDRQVIVDAPDRKGRLSILQVHARNKKVDPSVSLEVVARRTPGFTGADLANLLNEAAILTARRRKEAITQLEIDDAIDRLTIGLTLNPLLDSKKKRLIAYHEVGHALLATLLENADPLNKVTIIPRSGGVGGFSQQILNEEMIDSGLYSRAWMMDNITMTLGGKAAETEVFGESEVTGGASSDLKVVANLARKMVTMYGMSELGLVALENQNSDVFLGRDWMTRNDYSEEMATKIDRQVREMASICYQEARRIIRENRPLVDRLVDLLVEQETIEGEQFRKIVSEYTELPEKQKIVVFG

Annotated regions:
phrase: IIIIAATNRPDVLDAALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: IPKGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDAALLRPGRFDRQVIVDAP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: SVSLEVVARRTPGFTGADLANLLNEAAILTARRRKEAITQLEI
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: LDSKKKRLIAYHEVGHALLATLLENADPLNKVTIIPRSGGVGGFSQQILNEEMIDSGLYSRAWMMDNITMTLGGKAAETEVFGESEVTGGASSDLKVVANLARKMVTMYGMSELGLVALENQNSDVFLGRDWMTRNDYSEEMATKIDRQVREMASICYQEARRIIRENRPLVDRLVDLLVEQETIEGEQFRK
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: VLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDAALLRPGRFDRQVI
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core
Protein sequence:
MRLVKPKKALGQHFLKDLQIAQRIADTLDTFKSLPVLEIGPGMGVLTQFLLEAGHDLTVVELDMESVDYLNQNFPDLKGRIIAEDFLKLDLSKLFPGQFCVIGNYPYNISSQIFFKVLDYKDQIPCCSGMLQKEVAERLAAGPGSKTYGILSVLLQAWYDVEYLFTVSEKVFDPPPKVKSAVLKMTRNDRKELGCDEKLFKTVVKTSFNQRRKTLRNSMKPLLGKDCPDYALPIFDKRPEQLSMEQFVELTLISQKHLEKQAGDVL

Annotated regions:
phrase: IAQRIADTLDTFKSLPVLEIGPGMGVLTQFLLEAGHDLTVVELDMESVDYLNQNFPDLKGRIIAEDFLKLDLSKLFPGQFCVIGNYPYNISSQIFFKVLDYKDQIPCCSGMLQKEVAERLAAGPGSKTYGILSVLLQAWYDVEYLFTVSEKVFDPPPKVKSAVLKMTRN
type: DOMAIN
name: rRNA_Ade_methylase_Trfase_N
description: Ribosomal RNA adenine methylase transferase, N-terminal

phrase: VLEIGPGMGVLTQFLLEAGHDLTVVEL
type: CONSERVED_SITE
name: rRNA_Ade_Mease_Trfase_CS
description: Ribosomal RNA adenine methylase transferase, conserved site
Protein sequence:
MMSNIHTNISEWMKMSEETPVIISSRIRLARNLENHVHPLMFPSEQEGYRVINEVQDALSNLTLNRLDTMDQQSKMKLVAKHLVSPELVKQPASAVMLNDDESVSVMINEEDHIRIQALGTDLSLKDLYQRASKIDDELDKALDISYDEHLGYLTTCPTNIGTGMRASVMLHLPGLSIMKRMNRIAQTINRFGFTIRGIYGEGSQVYGHIYQVSNQLTLGKTEEDIIDNLTEVVNQIINEEKQIRERLDKHNSVETLDRVYRSLGVLQNSRIISMEEASYRLSEVKLGIDLNYILLENFKFNELMVAIQSPFLIDDDDNRTVNEKRADLLREHIK

Annotated regions:
phrase: VIISSRIRLARNLENHVHPLMFPSEQEGYRVINEVQDALSNLTLNRLDTMDQQSKMKLVAKHLVSPELVKQPASAVMLNDDESVSVMINEEDHIRIQALGTDLSLKDLYQRASKIDDELDKALDISYDEHLGYLTTCPTNIGTGMRASVMLHLPGLSIMKRMNRIAQTINRFGFTIRGIYGEGSQVYGHIYQVSNQLTLGKTEEDIIDNLTEVVNQIINEEKQ
type: DOMAIN
name: ATP-guanido_PTrfase_cat
description: ATP:guanido phosphotransferase, catalytic domain

phrase: CPTNIG
type: ACTIVE_SITE
name: ATP-guanido_PTrfase_AS
description: ATP:guanido phosphotransferase active site

phrase: VINEVQDALSNLTLNRLDTMDQQSKMKLVAKHLVSPELVKQPASAVMLNDDESVSVMINEEDHIRIQALGTDLSLKDLYQRASKIDDELDKALDISYDEHLGYLTTCPTNIGTGMRASVMLHLPGLSIMKRMNRIAQTINRFGFTIRGIYGEGSQVYGHIYQVSNQLTLGKTEEDIIDNLTEVVNQIINEEK
type: DOMAIN
name: ATP-guanido_PTrfase_cat
description: ATP:guanido phosphotransferase, catalytic domain
Protein sequence:
IEASLHFGFPASESARPAYEEKRPWQASDVVATVGHAFQLPIPLDGDPGRCTNVTEEGKKSLPDWLSWNAELNTLFGLPLEANTGLYFITVSHPSPNGGVHRKEMFPLHVVSEQSNSRVTDKLPSFPGSADGGCGPEEAVTVLTIIIDADLTKMNPGQRLQLLKKMEAFADVDVDKIKLMPVINNRLFDMSAFMAGPGNAKKVIENGALLSWKLGCSLNQSTIPNIANVEIPAKEGTMAEKIGYPVLGWHIANQKAVVNMRSRRQLYLTPTPVLVFVPPTTRAEPVEPPVRIVPSHVSPTFGPTDVTEDPVRYTGPGHIVTQVVTVTPSKVRPSVYATPILFPIQPTAIDTITATVGQSIQPTAARPEYIEPTVAVASLTTPAPTPPMKATTTTAPVAKITTKATTTTSRTTTKIIPDPNRPPTLKNPIDRLDVNIGTYFELKIPYDTFFDHEDGTTDRLKLVLCTSKHELVNASSWVQFNSTSQVLFGLPPDNEKLIGKHEYIMSAMDKGGKIARDAFEIIVHKKPNDGRSSAKFQAKFNNDYKKVANDVLMKIKLVKKLAYTLGDKNVSALTIDDMRSGSFTIVWNNNSLPLEPCPDEQIRQLGKKIGTDDGKPTENFDANMGPEFKPVSVNIVGSEDCEGISFVPVRKGPPMDRPQPTTPPPLEGPERTSQDDVYLHTVIPAVVVAAILLIAGVIAMICYRKKRKGKLSEEDQATFIKKGVPIIFADELDDTKPVPSSSMPLILTEEKPPLPPPEYPCQMAGPGM

Annotated regions:
phrase: CGPEEAVTVLTIIIDADLTKMNPGQRLQLLKKMEAFADVDVDKIKLMPVINNRLFDMSAFMAGPGNAKKVIENGALLSWKLGCSLNQSTIPNIANVEIPAKEGTMAEKIGYPVLGWHIANQ
type: DOMAIN
name: Alpha_DG1_N2
description: Alpha-dystroglycan N-terminal domain 2

phrase: TLKNPIDRLDVNIGTYFELKIPYDTFFDHEDGTTDRLKLVLCTSKHELVNASSWVQFNSTSQVLFGLPPDNEKLIGKHEYIMSAMDKGGKIARDAFEIIVHKKPNDG
type: DOMAIN
name: Cadg
description: Dystroglycan-type cadherin-like

phrase: RSSAKFQAKFNNDYKKVANDVLMKIKLVKKLAYTLGDKNVSALTIDDMRSGSFTIVWNNNSLPLEPCPDEQIRQLGKKIGTDDGKPTENFDANMGPEFKPVSVNIVGSE
type: DOMAIN
name: SEA_DG_dom
description: DG-type SEA domain

phrase: KFQAKFNNDYKKVANDVLMKIKLVKKLAYTLGDKNVSALTIDDMRSGSFTIVWNNNSLPLEPCPDEQIRQLGKKIGTDDGKPTENFDANMGPEFKPVSVNIVGSEDCEGISFVPVRKGPPMDRPQPTTPPPLEGPERTSQDDVYLHTVIPAVVVAAILLIAGVIAMICYRKKRKGKLSEEDQATFIKKGVPIIFADELDDTKPVPSSSMPLILTEEKPPLPPPEYPC
type: DOMAIN
name: DAG1_C
description: Dystroglycan, C-terminal

phrase: CGPEEAVTVLTIIIDADLTKMNPGQRLQLLKKMEAFADVDVDKIKLMPVINNRLFDMSAFMAGPGNAKKVIENGALLSWKLGCSLNQSTIPNIANVEIPAKEGTMAEKIGYPVLGWHIANQ
type: DOMAIN
name: Alpha_DG1_N2
description: Alpha-dystroglycan N-terminal domain 2
Protein sequence:
MSEEQKQQNDSPNKGGNNSNAKFPKFNGYWIYGIVLLLFISFFLMNQNEGVQSLSYSEFKEKILPSGDIDMATVITNQNVVEITIKQDQLEKYKEEFGDSFSSLLEKGPHFRIKVPSVDSFVEDLRKVEEAKNIIIPNNYEERSNYLNELLGFIWPLLLLLIVWVFIFRRMGAQGGSGGAGNIFNVGKSKAKMFDKESNIKVNFLDVAGLVEAKQELEEIVEFLKRPEKYTNLGGKIPKGALLIGPPGTGKTLLAKAVAGEANVPFFSMSGSDFVEMFVGVGASRVRDLFKKAKEKAPCIVFIDEIDAIGRARGKSPSMGANDERENTLNQLLTEMDGFGTNSGVIILAATNRADILDRALMRAGRFDRQIHVELPDITERQQIFDVHLRPLKLSEEVKSEFLAKQTPGFSGADIANVCNEAALIAARGDKKIVEKEDFMNAVDRIVGGLEKKNKIISKEEKRAIAYHEAGHAATSWLLEYAHPLVKVTIVPRGKALGAAWYLPEERQLTTTEQILDEMCSTLAGRAAEELEFGKISTGALNDLEKVTKQAYAMVTYYGMSKTIGNLSYFDSSGQNEYGFTKPYSEETAQAIDQEVAKIIEKQYARAKEILIQHKDKHAELANLLLEREVIFSEDLENIFGKRNVNKHIVQLDDNGSEAADAKVEESKDEEEAGAGPSSKETQE

Annotated regions:
phrase: LLIGPPGTGKTLLAKAVAGEANVPFFSMSGSDFVEMFVGVGASRVRDLFKKAKEKAPCIVFIDEIDAIGRARGKSPSMGANDERENTLNQLLTEMDGFGTNSGVIILAATNRADILDRALMRAGRFDRQIHV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: LAKQTPGFSGADIANVCNEAALIAARGDKKIVEKEDF
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: IISKEEKRAIAYHEAGHAATSWLLEYAHPLVKVTIVPRGKALGAAWYLPEERQLTTTEQILDEMCSTLAGRAAEELEFGKISTGALNDLEKVTKQAYAMVTYYGMSKTIGNLSYFDSSGQNEYGFTKPYSEETAQAIDQEVAKIIEKQYARAKEILIQHKDKHAELANLLLEREVIFSEDLEN
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: IPKGALLIGPPGTGKTLLAKAVAGEANVPFFSMSGSDFVEMFVGVGASRVRDLFKKAKEKAPCIVFIDEIDAIGRARGKSPSMGANDERENTLNQLLTEMDGFGTNSGVIILAATNRADILDRALMRAGRFDRQIHVELP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VIILAATNRADILDRALM
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: WIYGIVLLLFISFFLMNQNEGVQSLSYSEFKEKILPSGDIDMATVITNQNVVEITIKQDQLEKYKEEFGDSFSSLLEKGPHFRIKVPSVDSFVEDLRKVEEAKNIIIP
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular
Protein sequence:
MAAYQLDDTSLPAALPELPFAFARNFGVVLTERQGTPLLLCRPGVAPQTLLEVRRVAGCAFEVEQLGSDEFEELLMAHYQRDSSEARQLMEDLGNEMDFFALAEELPQSEDLLDADDDAPIIRLINAMLSEAIKEEASDIHIETFERVLVIRFRIDGVLREILRPHRKLASLLVSRIKVMSRMDIAEKRVPQDGRISLRIGGRAVDVRVSTMPSSYGERVVLRLLDKNNVRLELKQLGMTLANRNIISELIRKPHGIILVTGPTGSGKSTTLYAALSEINSRDRNILTVEDPIEYDLEGVGQTQVNTKVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAIGAITRMRDMGIEPFLLSSSLLAVLAQRLVRTLCPDCRAPRPITEQERLAMGMELAPDQQVWRPVGCEQCNHTGYRGRTGIHELVVIDEAVREAIHSASGELAIERLIRDHTPSIRRDGIDKVLKGQTSLEEVLRVTRED

Annotated regions:
phrase: ADDDAPIIRLINAMLSEAIKEEASDIHIETFERVLVIRFRIDGVLREILRPHRKLASLLVSRIKVMSRMDIAEKRVPQDGRISLRIGGRAVDVRVSTMPSSYGERVVLRLLDKNNVRLELKQLGMTLANRNIISELIRKPHGIILVTGPTGSGKSTTLYAALSEINSRDRNILTVEDPIEYDLEGVGQTQVNTKVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAIGAITRMRDMGIEPFLLSSSLLAVLAQRLVRTLCPDCRAPRPITEQERLAMGMELAPDQQVWRPVGCEQCNHTGYRGRTGIHELVVIDEAVREAIHSASGELAIERLIRDHTPSIRRDGIDKVLKGQTSLEEVL
type: DOMAIN
name: T2SS/T4SS_dom
description: Type II/IV secretion system domain

phrase: PHGIILVTGPTGSGKSTTLYAALSEINSRDRNILTVEDPIEYDLEGVGQTQVNTKVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIAVQASLTGHLVMSTLHTNTAIGAITRMRDMGIEPFLLS
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LRQDPDVVMVGEIR
type: DOMAIN
name: T2SS/T4SS_dom
description: Type II/IV secretion system domain

phrase: LPFAFARNFGVVLTERQGTPLLLCRPGVAPQTLLEVRRVAGCAFEVEQLGSDEFEELLMAH
type: DOMAIN
name: GSPE_N1E
description: Type II secretion system protein E, N1E domain
Protein sequence:
MEKELISIHDEEKVKVLLEQNGIKKFRYSQIENALYKNFVIDFHDMVTLSKDLRNILADNCCLYTLKVHTEKVSSNGQTTKILFKTKSGEFIETVIMRHLTGRVTLCVSCQVGCPMACTFCATGKLGLKENLSYTEIAEQIFYAAHLLYKQGDKLRNIVFMGMGEPMLNYENVKKSINFACNQKKLDISNRRITVSTCGIIPGIKKFTNDFPQTSLAISLHAPNDKIRKSIMPVEQTYPLNDLMESLDYYVEKTNKKVFYEYIMLSGVNDSIFLADELGKLLKGKLAHVNFIPYNAGEGTGGTYKTTPKVIIEKFQNILEKYGVVSTIRATMGDDIDAACGQLANKK

Annotated regions:
phrase: DEEKVKVLLEQNGIKKFRYSQIENALYKNFVIDFHDMVTLSKDLRNILADNC
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: LTGRVTLCVSCQVGCPMACTFCATGKLGLKENLSYTEIAEQIFYAAHLLYKQGDKLRNIVFMGMGEPMLNYENVKKSINFACNQKKLDISNRRITVSTCGIIPGIKKFTNDFPQTSLAISLHAPNDKIRKSIMPVEQTYPLNDLMESLDYYVEKTNKKVFYEYIMLSGVNDSIFLADELGKLLKGKLAHVNFIPYNAGEGTGGTYKTTPKVIIEKFQNILEKYGVVSTIRATMGD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SCQVGCPMACTFCATGKLGLKENLSYTEIAEQIFYAAHLLYKQGDKLRNIVFMGMGEPMLNYENVKKSINFACNQKKLDISNRRITVSTCGIIPGIKKFTNDFPQTSLAISLHAPNDKIRKSIMPVEQTYPLNDLMESLDYYVEKTNKKVFYEYIMLSGVND
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MTVKAIRKNYQPLWIWGIMLLGMLMICNATEQLWVTVYYGVPVWRDANTTLFCASDAKAYDTEAHNVWATHACVPTDPNPQEIKLTNVTEYFNVWKNNMVEQMNEDVINLWDQSLKPCVRLTPLCVTLNCTNVTVNITDTSANNVTNSTIGIEIMKNCSFHINTDRGKKVRKEYALFYSLDVIKDDDDKNNTKYRLVSCNTSAVTQACPKITFEPIPIHYCAPAGFALLKCNDKKFNGSGTCANVSTVQCTHGIRPVVSTQLLLNGSLAEGEVVIRSENFSDNAKTIIVQLNESVVINCIRPNNNTRKSINMGPGRAFYATGDIIGDIRQAHCNLSRAQWNNTLRQIVGKLREQFGNNKTMIFHQSAGGDPEIVMHSFNCGGEFFYCDTASLFNSTWQAKETERNDTGGNDTITLPCRIKQIINMWQAVGKAIYAPPIAGLIRCSSNITGLLLTRDGGNETMTKDNETFRPGEGNMRDNWRSELYKYKVVKVEPLGIAPTKARRRVVQREKRAVTIGAVFLGFLGAAGSTMGAASVTLTVQARQLLSGIVQQQNNLLKAIEAQQHLLQLTVWGIKQLQARVLALEAYLRDQQLLGIWGCSGKLICTTSVPWNTSWSNKSLDAIWHNMTWRQWDKEVHNYTNLIFNLLEDAQNQQEINEQELLKLDEWASLWNWFSISKWLWYIKIFIMIVGGLIGLRIVFTVLSLVNRVRQGYSPLSLQTLLPAPRGPERPDGIEEEGGERDRDRSERLVSGFLPLIWDDLRSLFLFS

Annotated regions:
phrase: VQARQLLSGIVQQQNNLLKAIEAQQHLLQLTVWGIKQLQARVLALEAYLRDQQLLGIWGCSGKLICTTSVPWNTSWSNKSLDAIWHNMTWRQWDKEVHNYTNLIFNLLEDAQNQQEINEQELLKL
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWRDANTTLFCASDAKAYDTEAHNVWATHACVPTDPNPQEIKLTNVTEYFNVWKNNMVEQMNEDVINLWDQSLKPCVRLTPLCVTLNCTNVTVNITDTSANNVTNSTIGIEIMKNCSFHINTDRGKKVRKEYALFYSLDVIKDDDDKNNTKYRLVSCNTSAVTQACPKITFEPIPIHYCAPAGFALLKCNDKKFNGSGTCANVSTVQCTHGIRPVVSTQLLLNGSLAEGEVVIRSENFSDNAKTIIVQLNESVVINCIRPNNNTRKSINMGPGRAFYATGDIIGDIRQAHCNLSRAQWNNTLRQIVGKLREQFGNNKTMIFHQSAGGDPEIVMHSFNCGGEFFYCDTASLFNSTWQAKETERNDTGGNDTITLPCRIKQIINMWQAVGKAIYAPPIAGLIRCSSNITGLLLTRDGGNETMTKDNETFRPGEGNMRDNWRSELYKYKVVKVEPLGIAPTKARRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: MGAASVTLTVQARQLLSGIVQQQNNLLKAIEAQQHLLQLTVWGIKQLQARVLALEAYLRDQQLLGIWGCSGKLICTTSVPWNTSWSNKSLDAIWHNMTWRQWDKEVHNYTNLIFNLLEDAQNQQEINEQELLKLDEWASLWNWFSISKWLWYIKIFIMIVGGLIGLRIVFTVLSLVNRVRQGYSPLSLQ
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MKSVKKFLNERMNSVDSADGVGGVGGKKSSLERLKCGEDTPTKGYVSLPNTPLPTSAPIAVGDPSPSPSIADSAQNTPLCTLQEDDSTSPPPAGAGTPGKNGHSQQEQSPFTFPAVSATSSSNPAPNPAPVQRKSRRKISLPWFRQSSVTGHGVLARQHTIDTPSSFRFFRQPSSSGLKLGNQEATWVVADYIATSGSNELSVSKGQQVEIVEPPTAGEPDFCLVRLNPQHDDAAVQEGLVPVSVLKPPPGSHKHGSGTAANAASSAGSQKSDMQDQSNRSKADALSSSTKRRGFSGRNWLPLMNRKGTDKPPSSKPLVKKPSEKNLRTPQKHAEELAEQQNQQPGASPATVLPSSQFPSSTQHPGGAGAGDYEPDEEVGLELPPPMKPIQEPHLIANGPPAFAKDAKESSGNMASPGKMDGNPLSEIEEIVKTTTEQHESNSRVDGGGGVENASTNGHGRSHDNNDESHTAVSDKAAALKKRQCVFAELMSTEEAYVQDLHEIVNGYMTEINNTNSDIPMPEDLKGGKMKLVFNNIKDIYEWHRDFFLRALRNCQKSPADLGPLIKRSATKFALYYTYCSNKPLSEYIVSAHYQYFDSIRQKLGHRLDLSNLIIKPVQRITKYELLIKEIIKATEGAGLYKEVPMLQEAYQQMKVVVKTVNDMMVVLRSLQDFDGEITAQGSLLMQGPMNCVVDAAQKHRELQVFLFQQIIIFADIEKTKNQYASPIFKYRSHIQLNHMQMKELGDCRFQIRSTDPKIPEMTIICQA

Annotated regions:
phrase: KRQCVFAELMSTEEAYVQDLHEIVNGYMTEINNTNSDIPMPEDLKGGKMKLVFNNIKDIYEWHRDFFLRALRNCQKSPADLGPLIKRSATKFALYYTYCSNKPLSEYIVSAHYQYFDSIRQKLGHRLDLSNLIIKPVQRITKYELLIKEIIKATEGAGLYKEVPMLQEAYQQMKVVVKTVND
type: DOMAIN
name: DH_dom
description: Dbl homology domain

phrase: GNQEATWVVADYIATSGSNELSVSKGQQVEIVEPPTAGEPDFCLVRLNPQHDDAAVQEGLVPVSVLKPPP
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: VFAELMSTEEAYVQDLHEIVNGYMTEINNTNSDIPMPEDLKGGKMKLVFNNIKDIYEWHRDFFLRALRNCQKSPADLGPLIKRSATKFALYYTYCSNKPLSEYIVSAHYQYFDSIRQKLGHRLDLSNLIIKPVQRITKYELLIKEIIKATEGAGLYKEVPMLQEAYQQMKVVVKTVN
type: DOMAIN
name: DH_dom
description: Dbl homology domain

phrase: VFAELMSTEEAYVQDLHEIVNGYMTEINNTNSDIPMPEDLKGGKMKLVFNNIKDIYEWHRDFFLRALRNCQKSPADLGPLIKRSATKFALYYTYCSNKPLSEYIVSAHYQYFDSIRQKLGHRLDLSNLIIKPVQRITKYELLIKEIIKATEGAGLYKEVPMLQEAYQQMKVVVKTV
type: DOMAIN
name: DH_dom
description: Dbl homology domain

phrase: ITAQGSLLMQGPMNCVVDAAQKHRELQVFLFQQIIIFADIEKTKNQYASPIFKYRSHIQLNHMQMKELGDCRFQIRSTDPKIPEMTIICQ
type: DOMAIN
name: SOS1_NGEF_PH
description: SOS1/NGEF-like, PH domain

phrase: RQCVFAELMSTEEAYVQDLHEIVNGYMTEINNTNSDIPMPEDLKGGKMKLVFNNIKDIYEWHRDFFLRALRNCQKSPADLGPLIKRSATKFALYYTYCSNKPLSEYIVSAHYQYFDSIRQKLGHRLDLSNLIIKPVQRITKYELLIKEIIKATEGAGLYKEVPMLQEAYQQMKVVVKTV
type: DOMAIN
name: DH_dom
description: Dbl homology domain

phrase: LSNLIIKPVQRITKYELLIKEIIKA
type: CONSERVED_SITE
name: GDS_CDC24_CS
description: Guanine-nucleotide dissociation stimulator, CDC24, conserved site
Protein sequence:
MAFAKISQVAHYAPAQVVTNDDLSKIMDTSDEWIRSRTGIQERRISLNENTSDLATNVAYQLLEKSGLSPEELDFVLVATISPDNSMPSVAARVQGTIGAVNAFAFDITAACSGFVFALATAEKLIKSGAYKKGLVIGAEVLSKTLDWSDRATAVLFGDGAGGVLLEESEEEHFFGESLNTDGSKGGLESGASAVISPYSDGTEQPNPYMQMDGKAIFDFAVKTVSKSIKALVEEKGEPDYFLLHQANIRILDTMAKKIDVSRDKFLANMMSYGNTSAASIPILLSENVANETLKLGSDQTILLSGFGGGLTWGSLIVKI

Annotated regions:
phrase: FDITAACSGFVFALATAEKLIKSGAYKKGLVIGAEVLSKTLDWSDRATAVLFGDGAGGVLLEESEEEHFFGESLNTD
type: DOMAIN
name: ACP_syn_III_N
description: Beta-ketoacyl-[acyl-carrier-protein] synthase III, N-terminal

phrase: EPDYFLLHQANIRILDTMAKKIDVSRDKFLANMMSYGNTSAASIPILLSENVANETLKLGSDQTILLSGFGGGLTWGSLIVK
type: DOMAIN
name: ACP_syn_III_C
description: Beta-ketoacyl-[acyl-carrier-protein] synthase III, C-terminal
Protein sequence:
MSNKTHFGFEEVDINQKAKKVGDVFHSVAEEYDLMNDVMSFGMHRLWKRMLLELSGLSENAIALDIASGTGDIPKLISQKFPSSHIHVTDINESMLTLGKERSINENFYQNCSFALASGEKLPYQDQMFDLVTIGFGLRNFTDKQAGLREMKRVLRPGGILLILEFSKPTNSLFSKIYDWYSFNVIPRLGSLFVDDADSYKYLAESIRMHPAQEELKLMVIEAGFEKCKFYNLVNGVVAIHQAN

Annotated regions:
phrase: YDLMNDVMSFGMHRL
type: CONSERVED_SITE
name: UbiE/COQ5_MeTrFase_CS
description: UbiE/COQ5 methyltransferase, conserved site

phrase: RVLRPGGILLILEF
type: CONSERVED_SITE
name: UbiE/COQ5_MeTrFase_CS
description: UbiE/COQ5 methyltransferase, conserved site
Protein sequence:
MSEVLATYLLTDTTDSEKRAEQIAAGLTVGSWTDLPLVKQEQLRKHKGRVVKVEEKEGTSENETQSVITIAYPEVNFSRDIPAVLTTVFGKLSLDGKIKLTDLEFSEGFKRSLPGPKFGIYGIRKLLGEFERPLLMSIFKGVIGRDLADIKEQLRQQALGGVDLIKDDEIFFENELAPFETRIIEGKQVLKETREETGHKTLYAVNLTGRTAELRDKARRAAELGADALLLNVFAYGLDVMQSLAEDKEIPLPIMAHPAVSGAFTSSPVYGLSHALLLGKLNRYCGADFSLFPSPYGSVALPKESALAIHDECVKDDVFHPSFAVPSAGIHPGMVPLLMRDFGIDHIINAGGGIHGHPKGGEGGGKAFRAIIDAVLEAQPIEEKAASCKDLQLALDKWGRVEAV

Annotated regions:
phrase: GIYGIRKLLGEFERPLLMSIFKGVIGRDLADIKEQLRQQALGGVDLIKDDEIFFENELAPFETRIIEGKQVLKETREETGHKTLYAVNLTGRTAELRDKARRAAELGADALLLNVFAYGLDVMQSLAEDKEIPLPIMAHPAVSGAFTSSPVYGLSHALLLGKLNRYCGA
type: DOMAIN
name: RuBisCO_lsu_C
description: Ribulose bisphosphate carboxylase, large subunit, C-terminal

phrase: HPSFAVPSAGIHPGMVPLLMRDFGIDHIINAGGGIHGHPKGGEGGGKAFRAIIDAVLEAQPIEEKAASCKDLQLALDK
type: DOMAIN
name: RuBisCO_lsu_C
description: Ribulose bisphosphate carboxylase, large subunit, C-terminal

phrase: EVLATYLLTDTTDSEKRAEQIAAGLTVGSWTDLPLVKQEQLRKHKGRVVKVEEKEGTSENETQSVITIAYPEVNFSRDIPAVLTTVFGK
type: DOMAIN
name: RuBisCO_lsu_fd_N
description: Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal
Protein sequence:
MKYDHLLVRYGELTLKGSNRKKFVNQLRNNVNKSLKGLDGFVVKGKRDRMYIELEDHADINEITYRLSKIFGIKSISPVLKVEKTIEAISAAAIKFAQQFEENSTFKIDVKRADKNFPMDTYELQRELGGAVLKHFDNISVNVKRPDHEIRVEVRLDAIYMYEEVVPGSGGLPVGTGGKTLLMLSGGIDSPVAGMEVMRRGVTIEAIHFHSPPFTSDQAKEKVIELTRILAERVGPIKLHIVPFTELQKQVNKVVHPRYTMTSTRRMMMRVADKLVHQIGALAIVNGENLGQVASQTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEIGTFETSIQPFEDCCTIFTPKNPVTEPNFDKVVQYESVFDFEEMINRAVENIETLEITSDYKTIKEQQTNQLINDFL

Annotated regions:
phrase: GTGGKTLLMLSGGIDSPVAGMEVMRRGVTIEAIHFHSPPFTSDQAKEKVIELTRILAERVGPIKLHIVPFTELQKQVNKVVHPRYTMTSTRRMMMRVADKLVHQIGALAIVNGENLGQVASQTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEIGTFETSIQPFEDCCTIFTPKNPVTEPNFDKVVQYESVF
type: DOMAIN
name: ThiI_AANH
description: Thil, AANH domain

phrase: NEITYRLSKIFGIKSISPVLKVEKTIEAISAAAIKFAQQFEENSTFKIDVKRADKNFPMDTYELQRELGGAVLKHFDNISVNVKRPDHEIRVEVRLDAIYMYEE
type: DOMAIN
name: THUMP_dom
description: THUMP domain

phrase: EKTIEAISAAAIKFAQQFEENSTFKIDVKRADKNFPMDTYELQRELGGAVLKHFDNISVNVKRPDHEIRVEVRLDAIYM
type: DOMAIN
name: THUMP_dom
description: THUMP domain

phrase: LLVRYGELTLKGSNRKKFVNQLRNNVNKSLKGLDGFVVKGKRDRMYIELEDHADINEITYRLSKIFGIKSISPVLKVEKTIEAISAAAIKFAQQFEENSTFKIDVKRADKNFPMDTYELQRELGGAVLKHFDNISVNVKRPDHEIRVEVRLDAIYMYEEVVPGSGGLPVGTGGKTLLMLSGGIDSPVAGMEVMRRGVTIEAIHFHSPPFTSDQAKEKVIELTRILAERVGPIKLHIVPFTELQKQVNKVVHPRYTMTSTRRMMMRVADKLVHQIGALAIVNGENLGQVASQTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEIGTFETSIQPFEDCCTIFTPKNPVTEPNFDKVVQYESVFDFE
type: DOMAIN
name: ThiI_N
description: ThiI, N-terminal

phrase: HLLVRYGELTLKGSNRKKFVNQLRNNVNKSLKGLDGFVVKGKRDRMYIELEDHADINEITYRLSKIFGIKSI
type: DOMAIN
name: ThiI_fer
description: ThiI, ferredoxin-like domain

phrase: VGTGGKTLLMLSGGIDSPVAGMEVMRRGVTIEAIHFHSPPFTSDQAKEKVIELTRILAERVGPIKLHIVPFTELQKQVNKVVHPRYTMTSTRRMMMRVADKLVHQIGALAIVNGENLGQVASQTLHSMYAINNVTSTPVLRPLLTYDKEEIIIKSKEIGTFETSIQPFEDCCTIFTPKNPVTE
type: DOMAIN
name: ThiI_AANH
description: Thil, AANH domain

phrase: HLLVRYGELTLKGSNRKKFVNQLRNNVNKSLKGLDGFVVKGKRDRMYIELEDHADINEITYRLSKIFGIKSISPVLKVEKTIEAISAAAIKFAQQFEENSTFKIDVKRADKNFPMDTYELQRELGGAVLKHFDNISVNVKRPDHEIRVEVRLDAIYMYEEVVPGS
type: DOMAIN
name: THUMP_ThiI
description: ThiI, THUMP domain

phrase: SISPVLKVEKTIEAISAAAIKFAQQFEENSTFKIDVKRADKNFPMDTYELQRELGGAVLKHFDNISVNVKRPDHEIRVEVRLDAIYMYEE
type: DOMAIN
name: THUMP_dom
description: THUMP domain
Protein sequence:
MKVLKDILYKVSINAVVGNTNVAINAIHFDSRKVEENDLFVAISGTVVDGHDYIKNAIEQKATAIICEELPQVLVEGVTYVEVDNSNRALAFLASNFYGAPSENLKLIGVTGTNGKTTVTSLLYQLFKNAGYKVGLLSTVKILVDDKAYKATHTTPDSLTINKYLKEMNDEGVEFCFMEASSHGIHQYRTEGLHFEGGVFTNLSHDHLDYHNTFAEYRDVKKSFFDNLPKKAFALVNIDDKNGLVMLQNTQARKFTYALKSYADYKVQILENQLGGLLLKVDDNEVWTKLIGNFNAYNVLAIYATAELLGLEKFEILRLISGLESVSGRFQYLISDEKITAIVDYAHTPDALKNVLETINSIRTKNEELITVVGCGGDRDKTKRPKMGHIATQLSTKVIFTSDNPRSEEPEAILKDIEAGVEPQNYKKSLTIVDRAQAIKTACQLAQPNDIILIAGKGHETYQEIKGERFDFDDYKTVQKFLKQLQK

Annotated regions:
phrase: VTGTNGKTTVTSLLYQLFKNAGYKVGLLSTVKILVDDKAYKATHTTPDSLTINKYLKEMNDEGVEFCFMEASSHGIHQYRTEGLHFEGGVFTNLSHDHLDYHNTFAEYRDVKKSFFDNLPKKAFALVNIDDKNGLVMLQNTQARKFTYALKSYADYKVQILENQLGGLLLKVDDNEVWTKLIGNFNAYNVLAIYA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: INAIHFDSRKVEENDLFVAISGTVVDGHDYIKNAIEQKATAIICEELPQVLVEGVTYVEVDNSNRALAFLASNF
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: GRFQYLISDEKITAIVDYAHTPDALKNVLETINSIRTKNEELITVVGCGGDRDKTKRPKMGHIATQLSTKVIFTSDNPRSEEPEAILKDIEAGVEPQNYKKSLTIVDRAQAIKTACQLAQPNDIILIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MTDTNISKESNEITAENEHEESIVKDLDDASVNEAIPAAQPETDEKQHHEGDHTSIEEDGDEDEEEEEEEEPPTLKYTRLNKLPANFFVKDPVSTSTFHETVFIFATHSGIIHICKPNFETIRTFKAHRASVLSVFTDGTYFATASMDGTVVIGSILDEKDIVAYDFQRPVHAVILDSNYYKTRSFISGGMAGQVIYSSKGWLGKRSDFVLEQGHGPIVSIQLIDDLVIWMNDKGISVFHLATRQIISVLEKPEDSPRSDLYWPRIAFPDPDRLIIGWSNYIWSLRVSLKTAQDEKEGTPISSGMSKILPSTASISFRAVQEKKVEVEHIFKLDSLISGIASFKDDLWMVLAYTPPEADAETGKKTFFNPDLKLINSTTGEVELEEELGLKEIANLGLNDFMLGTHIETIPKYYIISAKDGVIAEEFQISDRLEWYLDRKNYLQAWEISQHLVTPTKRLSYGILYVDSLIEEDNWEEAATFLQRLLVIKRDPNEIKSITQISTESNEEDLDKEILDYWETWSTIFINSNHVQELTNIIPNVTGLLPTSIYDTILRFWLKKDASRFKTLIELWDPSLYNISDIASELELEAKENETLERSLVTLYDKSHNPSKAVPHLIHLRDPNIIGYLSTNHILVPFVSELPVMIDLMFDKGDLKTLPVSKIEKRLQGVISILVDHRLEIPAKQIVNLFYESGLSFVSFFYLEKLADIDNFLVQGFGNERVKLYADYKREKLLPYLTKNDDYDIDTAITICETNDYTKELVYLLGKI

Annotated regions:
phrase: LVDHRLEIPAKQIVNLFYESGLSFVSFFYLEKLADIDNFLVQGFGNERVKLYADYKREKLLPYLTKNDDYDIDTAITICETNDYTKELVYLLGK
type: REPEAT
name: Clathrin_H-chain/VPS_repeat
description: Clathrin, heavy chain/VPS, 7-fold repeat
Protein sequence:
MKITRSLSTVEVHTGGEAFRIVTSGLPRAPGDTIVQRRAWLKENADEIRRALMFEPRGHADMYGGYLTEPVSPNADFGVIFVHNEGYSDHCGHGVIALSTAAVELGWVQRTVPETRVGIDAPCGFIEAFVKWDGEHAGPVRFVNVPSFIWQRDVSVETPSFGTVTGDIAYGGAFYFYVDGAPFDLPVREAAVEKLIRFGAEVKAAANAKYPVVHPEIPEINHIYGTIIANAPRHPGSTQANCCVFADREVDRSPTGSGTGGRVAQLYQRGLLAAGDTLVNESIVGTVFKGRVLRETTVGDIPAVIPEVEGSAHICGFANWIVDERDPLTYGFLVR

Annotated regions: