nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MNLNEILKNVRNSDFERLGEINDVEVHGLSYDSRLINSGDLFFCFKGEKKDSHDFVYDAIKGGASALVVERKIDIDFPQVISSSSRKMMSEIAEIFYEFPSREITTVGVTGTNGKTTTVNILSAIAKVAGEKTETIGTLTGQLTTPEAPDLQRQIRDSIGNGVSFLAMEVSSHALLQNRISRMTYDAAIFTNLSLDHLDYHGDMESYYKAKSSLFSPTHSKLAVINADNQFGKRLMNEVEIPQVSFSLNDVDIVERTLIKTTFRWKGKIIELKLPGVFNLENALAAAVTAEALGFNREVIAKGLESAKGTPGRFELLTHSDEEPYVIVDYCHTPDGLEKILLSINELLPGARTHIVFGCGGDRDTSKRAQMGMISETHATNVYLTSDNPRSEDQMAIINDILAGIHDTEPVYVNPDRREAIFHAVTTANQDDVVLIAGKGCEPYQEISGTLHPFLDSDVGREALEARR

Annotated regions:
phrase: VTGTNGKTTTVNILSAIAKVAGEKTETIGTLTGQLTTPEAPDLQRQIRDSIGNGVSFLAMEVSSHALLQNRISRMTYDAAIFTNLSLDHLDYHGDMESYYKAKSSLFSPTHSKLAVINADNQFGKRLMNEVEIPQVSFSLNDVDIVERTLIKTTFRWKGKIIELKLPGVFNLENALAAAV
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRFELLTHSDEEPYVIVDYCHTPDGLEKILLSINELLPGARTHIVFGCGGDRDTSKRAQMGMISETHATNVYLTSDNPRSEDQMAIINDILAGIHDTEPVYVNPDRREAIFHAVTTANQDDVVLIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: EVHGLSYDSRLINSGDLFFCFKGEKKDSHDFVYDAIKGGASALVVERKIDIDFPQVISSSSRKMMSEI
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain
Protein sequence:
MPQITLVFISLSGNTLSFVKRLSLYLADNYDYHVKQINIKDLKHETFPVKEEFVAILPTYLEGGNGVDSGDVEILTTPLGEFIAAHGNAQRCLGIIGSGNKNFNHQYCLTAKQYAKRFGFPLLGDFELRGTPDDISRLAQVIMEASSRHSSNDTQTLPNS

Annotated regions:
Protein sequence:
MKKNINLRSLAAQAIEQVVEKGQSLSNVLPPLQQKVSDKDKALLQELCFGVLRTLSQLEWLISKLMARPMTGKQRTVHFLIMVGLYQLLYTRIPPHAALAETVEGAVAIKRPQLKGLINGVLRQFQRQQEALLAEFAEHENRYLHPKWLLKRLQQAWPEQWQEIVEANNQRPPMWLRVNRNHHSRDEWLALLNEAGLEGFTHPDYPDAVRLATPAPVHALPGFAEGWVTVQDASAQGCMRYLQPENGERILDLCAAPGGKTTHILEVAPQAQVMAVDIDEQRLSRVYDNLKRLGVKAEVKQGDGRFPEQWCGNEQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIAELAQLQAEILNAIWGHLKPGGTLVYATCSILPEENSQQIAAFLARTPDAELHATGTPASPGQQNLPGVEEGDGFFYAKLIKRRN

Annotated regions:
phrase: IVEANNQRPPMWLRVNRNHHSRDEWLALLNEAGLEGFTHPDYPDAVRLATPAPVHALPGFAEGWVTVQDASAQGCMRYLQPENGERILDLCAAPGGKTTHILEVAPQAQVMAVDIDEQRLSRVYDNLKRLGVKAEVKQGDGRFPEQWCGNEQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIAELAQLQAEILNAIWGHLKPGGTLVYATCSILPEENSQQIAAFLARTPDAELHATGTPASPGQQNLPGVEEGDGFFYAKLIK
type: DOMAIN
name: MeTrfase_RsmB-F_NOP2_dom
description: SAM-dependent methyltransferase RsmB-F/NOP2-type domain

phrase: YLQPENGERILDLCAAPGGKTTHILEVAPQAQVMAVDIDEQRLSRVYDNLKRLGVKAEVKQGDGRFPEQWCGNEQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIAELAQLQAEILNAIWGHLKPGGTLVYATCSILPEENSQQIAAFLARTPDAELHATGTPASPGQQNLPGVEEGDGFFYAK
type: DOMAIN
name: MeTrfase_RsmB-F_NOP2_cat
description: SAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic core

phrase: FDRILLDAPCS
type: CONSERVED_SITE
name: RsmB/NOL1/NOP2-like_CS
description: RsmB/NOL1/NOP2-like, conserved site

phrase: LRSLAAQAIEQVVEKGQSLSNVLPPLQQKVSDKDKALLQELCFGVLRTLSQLEWLISKLMARPMTGKQRTVHFLIMVGLYQLLYTRIPPHAALAETVEGAVAIKRPQLKGLINGVLRQFQ
type: DOMAIN
name: NusB_RsmB_TIM44
description: NusB/RsmB/TIM44

phrase: INLRSLAAQAIEQVVEKGQSLSNVLPPLQQKVSDKDKALLQELCFGVLRTLSQLEWLISKLMARPMTGKQRTVHFLIMVGLYQLLYTRIPPHAALAETVEGAVAIKRPQLKGLINGVLRQFQRQ
type: DOMAIN
name: RsmB-like_N
description: Ribosomal RNA small subunit methyltransferase B-like, N-terminal domain

phrase: HPKWLLKRLQQAWPEQWQEIVEANNQRPPMWLRVNRNHHSRDEWLALLNEAGLEGFTHPDYPDAVRLATPAPV
type: DOMAIN
name: RsmB-like_ferredoxin
description: Ribosomal RNA small subunit methyltransferase B-like, ferredoxin-like domain
Protein sequence:
MYKLQLLSCIALTLALVANSAPTLSSTKDTKKQLEPLLLDLQFLLKEVNNYENLKLSRMLTFKFYMPKKATELKHLQCLMEELKPLEEVLNLAQSKNSHLTNIKDSMNNINLTVSELKGSETGFTCEYDDETVTVVEFLNKWITFCQSIYSTMT

Annotated regions:
phrase: TELKHLQCLMEE
type: CONSERVED_SITE
name: IL-2_CS
description: Interleukin-2, conserved site
Protein sequence:
MELSQTALFIGSIINLNALVLILRAWLQFARVDYYNPVSTFAVKMTDPVLKPLRKIAPTVKNIDTSALLLIFIIGMLKGIIYFGLSVNVLLVLGVLTVLKSIGLAIFYVLFIGAVLSWFNRGNNSISYAFYQLSEPLLKPIRRLLPTLGMIDFSPMVVMFILLFLNNFMLDLLGGLWIIAG

Annotated regions:
Protein sequence:
MTRTLLKIYTLFILLLCRQRDANRKLLVFLIDGFRHDYMDDLHNLPGFREIVENGVKVDYLTPDFPSLSYPNYYSLMTGRHCEVHQMTGNYMWDTDTQKEFLIGTNPDSRLPMWWDGSEPLWVTMQKLGKKVYMYYWPGCEVTILGVRPTFCEEYVYNPSEKNLTDSMENALNALKSSKADMAGIYYEKIDVEGHHFGPRSPEIQRAIRSLDQAFQILNQKIREKNMRDTINVVLFSDHGMTQLKWMEKIIELDNYINMSHIIKMMDRGPVVSLWPKQDKFEEIYQNLSTADNMNVYKKHEIPDRFHYKNGQFVSTLTLVAEPGWFITENKAKLPFWNNGTEAAGGWQHGWHGYDNEFVDMRGSFLAQGPDFKSNYRAGPIRTVDVYNVLCKTLGMNPLPNNGSWSRVECMMRSSAATAGASLISCCFLLLLTLTGVC

Annotated regions:
Protein sequence:
MSGELNGNDTSVQAAVSAGSVLEGAAFADEGEQHNESMKTLVLGALGVVYGDIGTSPIYAFREALHAAATNGILARSDILGVVSFIFWALTLVVTVKYVLFVLRADNNGEGGILSLMALVRGALKGRPDLILGVGICGAALFFGDAVITPAISVLSAMEGLEIVAPNLTPFVVPATVVILVTLFSVQKLGTGRVAIVFGPIMALWFVALGASGLWHIFDDPTVMAALNPYYAVRFLTVSPAVAFVTVGAVFLAMTGAEALYADLGHFGRKPIVRAWLWIVFPCLLLNYFGQAAFILSHGEAAALPFFQMIPSFALWPMVLLATAATVIASQAVITGAYSVARQAVQLNILPRLEIQHTSEKLHGQIYIPRVNLLLGLAVVILVLGFEKSSNLAAAYGIAVTGNMLVTTVLLYIVMTRIWNWRVSRALPIILGFLVIDMLFFSANIIKVHEGGWASIGIATVLVLIMWTWVRGTRHLFQKTRKAEVPLDLIVEQMAKRPPTIVPGTAVFLTGDPKSAPTALMHSLKHYKVLHENNVILTVVTASKPWVALADRARVSQYNERFMLVTLTFGYMQQPNIPRALGLCRRLGWKFDIMTTSFFLSRRSLKASVHSGMPLWQDKLFILLARTASDATEYFQIPTGRVVEIGTQVNI

Annotated regions:
phrase: VLGALGVVYGDIGTSPIYAFREALHAAATNGILARSDILGVVSFIFWALTLVVTVKYVLFVLRADNNGEGGILSLMALVRGALKGRPDLILGVGICGAALFFGDAVITPAISVLSAMEGLEIVAPNLTPFVVPATVVILVTLFSVQKLGTGRVAIVFGPIMALWFVALGASGLWHIFDDPTVMAALNPYYAVRFLTVSPAVAFVTVGAVFLAMTGAEALYADLGHFGRKPIVRAWLWIVFPCLLLNYFGQAAFILSHGEAAALPFFQMIPSFALWPMVLLATAATVIASQAVITGAYSVARQAVQLNILPRLEIQHTSEKLHGQIYIPRVNLLLGLAVVILVLGFEKSSNLAAAYGIAVTGNMLVTTVLLYIVMTRIWNWRVSRALPIILGFLVIDMLFFSANIIKVHEGGWASIGIATVLVLIMWTWVRGTRHLFQKTRKAEVPLDLIV
type: DOMAIN
name: K_trans_N
description: K+ potassium transporter, integral membrane domain

phrase: PGTAVFLTGDPKSAPTALMHSLKHYKVLHENNVILTVVTASKPWVALADRARVSQYNERFMLVTLTFGYMQQPNIPRALGLCRRLGWKFDIMTTSFFLSRRSLKASVHSGMPLWQDKLFILLARTASDATEYFQIPTGRVVEIGTQVN
type: DOMAIN
name: K_trans_C
description: K+ potassium transporter, C-terminal domain
Protein sequence:
MQIVDFLIALLPALFWGSVVIINVFVGGGPYNQIRGTTLGTLFIGFSLLATGHAAFDNLTVIIVGLVSGALWAFGQGNQLKSVHLIGVSKTMPISTGMQLVGTTLFSAIFLGEWSTIVQVVMGLIAMILLVVGISLTSLKAKSEGKSDNPEFKKAMGILLLSTIGYVGYVVLGDIFGVSGTDALFFQSIGMAIGGLILSMNHNTSIKSTALNLIPGVIWGIGNLFMFYSQPKVGVATSFSLSQLLVIVSTLGGIFILGEKKDRRQMIGIWSGIIVIVIASIILGNLK

Annotated regions:
Protein sequence:
MAQTLTILGLESSCDDTAAAVVRQTEGQAAEILSSVVHGQADLHSAYGGVVPEIAARAHAEKLDICVRQALTEAGVSLTDLDAVAVTAGPGLIGGVMSGVMCAKGIAAATGLPLIGVNHLAGHALTPRLTDQIAYPYLMLLVSGGHCQYLIAHGPEQFSRLGGTIDDAPGEAFDKTARLLGLPQPGGPSVEGEARQGDPKRFRFPRPLLDRPDCDLSFSGLKTALMRMRDQLVGEKGGLTRQDRADLCAGFQAAVVDTLAEKTRRALTLYLDEAPAEPVVAVAGGVAANAAIRAALETVCAEAGARFTAPPLRLCTDNAAMIAYAGLERFRSGARDGLDLTARPRWPLDQSSPAMLGSGKKGAKA

Annotated regions:
phrase: AQTLTILGLESSCDDTAAAVVRQTEGQAAEILSSVVHGQADLHSAYGGVVPEIAARAHAEKLDICVRQALTEAGVSLTDLDAVAVTAGPGLIGGVMSGVMCAKGIAAATGLPLIGVNHLAGHALTPRLTDQIAYPYLMLLVSGGHCQYLIAHGPEQFSRLGGTIDDAPGEAFDKTARLLGLPQPGGPSVEGEARQGDPKRFRFPRPLLDRPDCDLSFSGLKTALMRMRDQLVGEKGGLTRQDRADLCAGFQAAVVDTLAEKTRRALTLYLDEAPAEPVVAVAGGVAANAAIRAALETVCAEAGARFTAPPLRLCTDNAAMIAYAGLERFRSGARDGLDLTARPRWPLDQ
type: DOMAIN
name: Gcp-like_dom
description: Gcp-like domain

phrase: EILSSVVHGQADLHSAYGGVVPEIAARAHAEKLDICVRQALTEAGVSLTDLDAVAVTAGPGLIGGVMSGVMCAKGIAAATGLPLIGVNHLAGHALTPRLTDQIAYPYLMLLVSGGHCQYLIAHGPEQFSRLGGTIDDAPGEAFDKTARLLGLPQPGGPSVEGEARQGDPKRFRFPRPLLDRPDCDLSFSGLKTALMRMRDQLVGEKGGLTRQDRADLCAGFQAAVVDTLAEKTRRALTLYLDEAPAEPVVAVAGGVAANAAIRAALETVCAEAGARFTAPPLRLCTDNAAMIA
type: DOMAIN
name: Gcp-like_dom
description: Gcp-like domain
Protein sequence:
MTVPNVLAKALYDNVAESPDELSFRKGDIMTVLERDTQGLDGWWLCSLHGRQGIVPGNRLKILVGMYDKKPVGPGPGPPATPPQPQPSLPQGVHAPVPPASQYSPMLPTAYQPQSDNVYLVPTPSKTQQGLYQAPGPNPQFQSPPAKQTSTFSKQTPHHSFPSPATDLYQVPPGPGSPAQDIYQVPPSAGIGHDIYQVPPSLDTRGWEGTKPPAKVVVPTRVGQGYVYEAAQTEQDEYDTPRHLLAPGPQDIYDVPPVRGLLPNQYGQEVYDTPPMAVKGPNGRDPLLDVYDVPPSVEKGLLSSSHHSVYDVPPSVSKDVPDGPLLREETYDVPPAFAKPKPFDPTRHPLILAAPPPDSPAAEDVYDVPPPAPDLYDVPPGLRRPGPGTLYDVPRERVLPPEVADGSVVDDGVYAVPPPAEREAPTDGKRLSASSTGSTRSSQSASSLEVVVPGREPLELEVAVESLARLQQGVSTTVAHLLDLVGSASGPGGWRGTSEPQEPPAQDLKAAVAAVHGAVHELLEFARGAVSNATHTSDRTLHAKLSRQLQKMEDVYQTLVVHGQVLDSGRGSPGFTPEDLDRLVACSRAVPEDAKQLASFLHGNASLLFRRTKAPGPGPEGSSSLHPNPTDKASSIQSRPLPSPPKFTSQDSPDGQYENSEGGWMEDYDYVHLQGKEEFEKTQKELLERGNIMRQGKGQLELQQLKQFERLEQEVSRPIDHDLANWTPAQPLVPGRTGGLGPSDRQLLLFYLEQCEANLTTLTDAVDAFFTAVATNQPPKIFVAHSKFVILSAHKLVFIGDTLSRQAKAADVRSQVTHYSNLLCDLLRGIVATTKAAALQYPSPSAAQDMVDRVKELGHSTQQFRRVLGQLAAA

Annotated regions:
phrase: VLAKALYDNVAESPDELSFRKGDIMTVLERDTQGLDGWWLCSLHGRQGIVPGNRLKIL
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: NSEGGWMEDYDYVHLQGKEEFEKTQKELLERGNIMRQGKGQLELQQLKQFERLEQEVSRPIDHDLANWTPAQPLVPGRTGGLGPSDRQLLLFYLEQCEANLTTLTDAVDAFFTAVATNQPPKIFVAHSKFVILSAHKLVFIGDTLSRQAKAADVRSQVTHYSNLLCDLLRGIVATTKAAALQYPSPSAAQDMVDRVKELGHSTQQFRRV
type: DOMAIN
name: CAS_C
description: CAS family, C-terminal

phrase: VPNVLAKALYDNVAESPDELSFRKGDIMTVLERDTQGLDGWWLCSLHGRQGIVPGNRLKILV
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: LELEVAVESLARLQQGVSTTVAHLLDLVGSASGPGGWRGTSEPQEPPAQDLKAAVAAVHGAVHELLEFARGAVSNATHTSDRTLHAKLSRQLQKMEDVYQTLVVHGQVLDSGRGSPGFTPEDLDRLVACSRAVPEDAKQLASFLHGNASLLFRR
type: DOMAIN
name: Serine_rich_dom
description: Serine rich protein interaction domain

phrase: VLAKALYDNV
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: DELSFRKGDIMTVLE
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: RQGIVPGNRLKI
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: KALYDNVAESPDELSFRKGDIMTVLERDTQGLDGWWLCSLHGRQGIV
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: GLGPSDRQLLLFYLEQCEANLTTLTDAVDAFFTAVATNQPPKIFVAHSKFVILSAHKLVFIGDTLSRQAKAADVRSQVTHYSNLLCDLLRGIVATTKAAALQYPSPSAAQDMVDRVKELGHSTQQFRRVLGQ
type: DOMAIN
name: BCAR1_C
description: BCAR1, C-terminal

phrase: NVLAKALYDNVAESPDELSFRKGDIMTVLERDTQGLDGWWLCSLHGRQGIVPGNRLKILVGMYDKK
type: DOMAIN
name: BCAR1_SH3
description: BCAR1, SH3 domain
Protein sequence:
MSFKDLRDFLNHLEKKGQLKRITHPVDPAYEMTEISDRTLRAGGPALLFENPIGYDIPVLTNLFGTAERVAMGMGREQVKELREVGQWLAYLKEPEPPKGFKDALDKLPVFKQVLNMPVKRLRKAACQEVVWQGEEVDLDKIPVMSCWQDDVAPLLTWGLTITRGPNKKRQNLGIYRQQKIAKNKIIMRWLAHRGGALDLRDWMEKYPGKPFPVSVAFGADPATILGAVTPVPDTLSEYAFAGLLRGSKTEVVKSASNDLEIPVSAEIVLEGYIDPNEYADEGPYGDHTGYYNEKEKHHVFTITHITMRKEPIYHSTYTGRPPDEPAVLGVALNEVFVPILQKQFPEIEDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKYVVVCDESVNARDWDDVVKAMTENMNPILDSLFIESTPIDSLDFASPVAGLGSKMGLDATIKWEAELALQGATTSTEFASQIGFDVNALKAVHPLISDIYVPGVASGQFMVVKINKTHAGQCKEVVESLWQVESVKQRNKFIVVCDDDVKADDWHDIIWAITTRMDPARDTLKIDGSKSCSAKLVFDATNKYSEEITREWGKPIKKDPKLVAKVDALWQEFGIL

Annotated regions:
phrase: LNHLEKKGQLKRITHPVDPAYEMTEISDRTLRAGGPALLFENPIGYDIPVLTNLFGTAERVAMGMGREQVKELREVG
type: DOMAIN
name: UbiD-like_N
description: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase-like, N-terminal domain

phrase: VLGVALNEVFVPILQKQFPEIEDFYLPPEGCSYRMAVVTMKKQYPGHAKRVMMGVWSFLRQFMYTKYVVVCDESVNARDWDDVVKAMTENMNPILDSLFIESTPIDSLDFASPVAGLGSKMGLD
type: DOMAIN
name: UbiD-like_C
description: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase-like, C-terminal domain

phrase: NALKAVHPLISDIYVPGVASGQFMVVKINKTHAGQCKEVVESLWQVESVKQRNKFIVVCDDDVKADDWHDIIWAITTRMDPARDTLKIDG
type: DOMAIN
name: UbiD-like_C
description: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase-like, C-terminal domain

phrase: RKAACQEVVWQGEEVDLDKIPVMSCWQDDVAPLLTWGLTITRGPNKKRQNLGIYRQQKIAKNKIIMRWLAHRGGALDLRDWMEKYPGKPFPVSVAFGADPATILGAVTPVPDTLSEYAFAGLLRGSKTEVVKSASNDLEIPVSAEIVLEGYIDPNEYADEGPYGDHTGYYNEKEKHHVFTITHITMRKEPIYHSTYTGR
type: DOMAIN
name: UbiD_Rift_dom
description: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase-like, Rift-related domain
Protein sequence:
METFEISDFKEHAKKKSMWAGALNKVTISGLMGVFTEDEDLMALPIHRDHCPALLKIFDELIVNATDHERACHNKTKKVTYIKISFDKGVFSCENDGPGIPIVKHEQASLIAKRDVYVPEVASCYFLAGTNINKAKDCIKGGTNGVGLKLAMVHSQWAILTTADGAQKYVQHINQRLDNIEPPTITPSREMFTRIELMPVYQELGYAQPLSETEQADLSAWIYLRACQCAAYVGKGTTIYYNDKPCSTSSVMALAKMYTLVTAPNSTIYTTTIKADAKPYSLHPLQVAAVVSPKFKKFEHVSIINGVNCVKGEHVTFLKKAINEMVVKKFQQTVKDKNRKTTLRDSCSNIFVVIVGSIPGIEWTGQRKDELSIAENVFKTHYSIPSSFLTSMTRSIVDILLQSISKKDNHKQIDVDKYTRARNAGGKKAQDCMLLAAEGDSALSLLRAGLTLGKSNPSGPSFDFCGMISLGGVIMNACKKVTNITTDSGETIMVRNEQLTNNKVLQGIVQVLGLDFNCHYKTQEERAKLRYGCIVACVDQDLDGCGKILGLLLAYFHLFWPQLIVHGFVKRLLTPLIRVYEKGNTVPVEFYYEQEFDAWAKKQTSLANHTVKYYKGLAAHDTHEVKSMFKHFDKMVYTFTLDDSAKELFHIYFGGESELRKRELCTGVVPLTETQTQSIHSVRRIPCSLHLQVDTKAYKLDAIERQIPNFLDGMTRARRKILAGGLKCFASNNRERKVFQFGGYVADHMFYHHGDMSLNTSIIKAAQYYPGSSHLYPVFIGIGSFGSRHLGGKDAGSPRYISVQLASEFIKTMFPAEDSWLLPYVFEDGQRAEPEYYVPVLPLAIMEYGANPSEGWKYTTWARQLEDILALVRAYIDKNNPKHELLHYAIDHKITVLPLRPSNYNFKGHLKRFGQYYYSYGTYVVSEQRNMITITELPLRVPTVAYIESIKKSSNRMAFIEEIVDYSSSETIEILVKLKPNSLSRIIEEFKETEEQNSIENFLRLRNCLHSHLNFVKPKGGIIEFNSYYEILYAWLPYRRDLYQKRLMRERAVLKLRIIMETAIVRYINESADLNLSHYEDEKEAGRILSEHGFPPLNQSLITSPEFATIEELNQKALQGCYTYILSLQARELLIAAKTRRVEKIKKMQARLDKVEQLLQESPFPGASVWLEEIDAVEKAIIKGRNTQWKFH

Annotated regions:
phrase: LTPLIRVYEKGNTVPVEFYYEQEFDAWAKKQTSLANHTVKYYKGLAAHDTHEVKSMFKHFDKMVYTFTLDDSAKELFHIYFGGESELRKRELCTGVVPLTE
type: DOMAIN
name: TOPRIM_C
description: C-terminal associated domain of TOPRIM

phrase: RQIPNFLDGMTRARRKILAGGLKCFASNNRERKVFQFGGYVADHMFYHHGDMSLNTSIIKAAQYYPGSSHLYPVFIGIGSFGSRHLGGKDAGSPRYISVQLASEFIKTMFPAEDSWLLPYVFEDGQRAEPEYYVPVLPLAIMEYGANPSEGWKYTTWARQLEDILALVRAYIDKNNPKHELLHYAIDHKITVLPLRPSNYNFKGHLKRFGQYYYSYGTYVVSEQRNMITITELPLRVPTVAYIESIKKSSNRMAFIEEIVDYSSSETIEILVKLKPNSLSRIIEEFKETEEQNSIENFLRLRNCLHSHLNFVKPKGGIIEFNSYYEILYAWLPYRRDLYQKRLMRERAVLKLRIIMETAIVRYINESADLNLSHYEDEKEAGRILSEHGFPPLNQSLITSPEFATIEELNQKALQGCYTYILSLQARELLIAAKTRRVEKIKKMQARLDKVEQLLQ
type: DOMAIN
name: Topo_IIA_dom_A
description: DNA topoisomerase, type IIA, domain A

phrase: RQIPNFLDGMTRARRKILAGGLKCFASNNRERKVFQFGGYVADHMFYHHGDMSLNTSIIKAAQYYPGSSHLYPVFIGIGSFGSRHLGGKDAGSPRYISVQLASEFIKTMFPAEDSWLLPYVFEDGQRAEPEYYVPVLPLAIMEYGANPSEGWKYTTWARQLEDILALVRAYIDKNNPKHELLHYAIDHKITVLPLRPSNYNFKGHLKRFGQYYYSYGTYVVSEQRNMITITELPLRVPTVAYIESIKKSSNRMAFIEEIVDYSSSETIEILVKLKPNSLSRIIEEFKETEEQNSIENFLRLRNCLHSHLNFVKPKGGIIEFNSYYEILYAWLPYRRDLYQKRLMRERAVLKLRIIMETAIVRYINESADLNLSHYEDEKEAGRILSEHGFPPLNQSLITSPEFATIEELNQKALQGCYTYILSLQARELLIAAKTRRVEKIKKMQARLDKVEQLLQESPFPGASVWL
type: DOMAIN
name: Topo_IIA_dom_A
description: DNA topoisomerase, type IIA, domain A

phrase: AAEGDSAL
type: CONSERVED_SITE
name: TopoIIA_CS
description: DNA topoisomerase, type IIA, conserved site
Protein sequence:
MVQKSLLFSLLASTALGALTKRYSFPLPESQGSETFSEPYEVAAGETFDGGMKTYGRGVECTGQVEGGEDDTVFIVQEGGTLKNAIIGTDQIEGVYCLGSCTIENVWWEKVCEDALSLKEGDGIYTISGGGAQGAEDKVIQHNTGGEVIIDGFEVYDFGKLYRSCGTCGDIQRKVSVSNVVAVSGSQLVGINENFGDTATIDSSVCATDVNDICATYNGTDGDEEPEEVSTGPSDYCIYTEPIAECA

Annotated regions:
Protein sequence:
MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKLAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDVSDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVDEGKIAETRFENYHRILESMAQVKTRKNFSDTDD

Annotated regions:
phrase: TSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDVSDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE
type: DOMAIN
name: G_CP_dom
description: Circularly permuted (CP)-type guanine nucleotide-binding (G) domain

phrase: VHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDVSDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL
type: DOMAIN
name: RsgA_GTPase_dom
description: RsgA GTPase domain

phrase: ANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDVSDNSGLGQHTTTAARLYHFPHGGDVIDSPGV
type: DOMAIN
name: RsgA_GTPase_dom
description: RsgA GTPase domain
Protein sequence:
MRYAVLVTGPAGAGKSTFCASLITHAQTIGRSVHLVNLDPAADKFEYEPTIDIRDLINLEDVMEELEFGPNGGLIYCFEYLLNNLDWLEDELGAYEDDYLIIDCPGQIELYTHVPLLPRLATFLSTSLNFRTSAVYLIDSQFMQDKSKFFAGVMSAMSCMLSLGISMLCLMSKMDLVKDKKGRTKREVGRYLDPDPNLLLEDINQGTNSKFNQLNRAVVSLIEDQNIVSFLPLDVTSEDSVNTVLSHIDNMMQYGEDEEPKVPKDMDDGEFVAPPRSYNIKLIVRDR

Annotated regions:
Protein sequence:
MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIARCPYGPRPGDEVKQFTTQLANKLMQFDIKMLVIACNTATAVALEHLQQMLPIPVIGVIEPGSRTAIMTTKNQNVLILGTEGTIKSEAYRHHIKHINPNVHVLWCGLPGFVPLVEQMRYDDPTITSIVIHQTLKQWRNTDADTIILGCTHYPLLYKPINDYFGGEKKVISSGLETAREVSALLTFSNEHASYTQHPEHRFFATGDTVHIKNIILQWLKLDVEVERISVDE

Annotated regions:
phrase: IILGCTHYPL
type: ACTIVE_SITE
name: Asp/Glu_racemase_AS_2
description: Asp/Glu racemase, active site 2

phrase: VIACNTAT
type: ACTIVE_SITE
name: Asp/Glu_racemase_AS_1
description: Asp/Glu racemase, active site 1
Protein sequence:
MIQFHIEAPDKGLEAALQDKIDNLTKPKGSLGTLEALALQVGLIQQTLSPVLRHPVNVIYASDHGIADEGVSKSPKEVTRQVIHNFLNGGAGVCYLARQHGFELKIVDGGVDFDFPVIPQLIDRKVRKGGTRNFLHEAAMTVEEMEKALQYGADIVTDCYNEGCNVISFGEMGIGNTAASSMWMTCLTQIPLIDCVGAGSGLDSEGVRHKYNVLKRSLENYKGDGSALDVMRYFGGYEMVMAVGGMLRAAELKMIILVDGFIMTNCVLVASRLYPEMQSYCVFGHCGDEAGHKRVLDFLGAKALLDLGLRLGEGSGSVCAYPILDSAVRMINEMHSFKQAAITKYF

Annotated regions:
Protein sequence:
MPHAHIIGLGQSGIAAARLLRREGWQVTISDRNSTPTLVEQQQRLDQEGIDVLLAHNFELDRDSHPPDLVVVSPGVPWQGAGLVQARAAGIETIGEIELAWRHLQQFPWVGITGTNGKTTTTALVAAMFQTAGLKAIACGNIGYSVCDLVLSEQAIDWVIAEISSYQLESLPRLAPKIAVWTTFTPDHLERHGTLECYRETKAVLLQQAEYKVLNGDDPYLRQELSDRWPEVWWTSCNGRAALPHGIERGIYLEEGWVKVQEQPIVPVSSWKMPGHHNLQNLLLAVAVAHLGGIPVAAIAEAVNNFGGVPHRLEPICTWSGIQFINDSKATNYDAAETGLVAVPAPVILIAGGQAKQGDDRRWLEMIQTKAAAVLLIGAAANLFAQRLQEVGYDRYEIVETMANAVPRAAELAKKYSANIVLLSPACASFDQYKSFEQRGDDFRQLCLSRFAK

Annotated regions:
phrase: ITGTNGKTTTTALVAAMFQTAGLKAIACGNIGYSVCDLVLSEQAIDWVIAEISSYQLESLPRLAPKIAVWTTFTPDHLERHGTLECYRETKAVLLQQAEYKVLNGDDPYLRQELSDRWPEVWWTSCNGRAALPHGIERGIYLEEGWVKVQEQPIVPVSSWKMPGHHNLQNLLLAVAV
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: HRLEPICTWSGIQFINDSKATNYDAAETGLVAVPAPVILIAGGQAKQGDDRRWLEMIQTKAAAVLLIGAAANLFAQRLQEVGYDRYEIVETMANAVPRAAELAKKYSANIVLLSPA
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MLYAKPPPTINGIKGLQRKERLKPAHIHLQQLTCFSITCSSTMSYSCCLPSLGCRTSCSSRPCVPPSCHGYTLPGACNIPANVSNCNWFCEGSFNGSEKETMQFLNDRLASYLEKVRQLERDNAELEKLIQERSQQQEPLLCPSYQSYFKTIEELQQKILCAKAENARLVVNIDNAKLASDDFRSKYQTEQSLRLLVESDINSIRRILDELTLCKSDLESQVESLREELICLKKNHEEEVNTLRSQLGDRLNVEVDTAPTVDLNQVLNETRSQYEALVEINRREVEQWFATQTEELNKQVVSSSEQLQSCQAEIIELRRTVNALEIELQAQHNLRDSLENTLTESEAHYSSQLSQVQSLITNVESQLAEIRCDLERQNQEYQVLLDVRARLECEINTYRSLLESEDCKLPCNPCATTNASGNSCGPCGTSQKGCCN

Annotated regions:
phrase: INTYRSLL
type: CONSERVED_SITE
name: IF_conserved
description: Intermediate filament protein, conserved site

phrase: EKETMQFLNDRLASYLEKVRQLERDNAELEKLIQERSQQQEPLLCPSYQSYFKTIEELQQKILCAKAENARLVVNIDNAKLASDDFRSKYQTEQSLRLLVESDINSIRRILDELTLCKSDLESQVESLREELICLKKNHEEEVNTLRSQLGDRLNVEVDTAPTVDLNQVLNETRSQYEALVEINRREVEQWFATQTEELNKQVVSSSEQLQSCQAEIIELRRTVNALEIELQAQHNLRDSLENTLTESEAHYSSQLSQVQSLITNVESQLAEIRCDLERQNQEYQVLLDVRARLECEINTYRSLLESEDCK
type: DOMAIN
name: IF_rod_dom
description: Intermediate filament, rod domain

phrase: SEKETMQFLNDRLASYLEKVRQLERDNAELEKLIQERSQQQEPLLCPSYQSYFKTIEELQQKILCAKAENARLVVNIDNAKLASDDFRSKYQTEQSLRLLVESDINSIRRILDELTLCKSDLESQVESLREELICLKKNHEEEVNTLRSQLGDRLNVEVDTAPTVDLNQVLNETRSQYEALVEINRREVEQWFATQTEELNKQVVSSSEQLQSCQAEIIELRRTVNALEIELQAQHNLRDSLENTLTESEAHYSSQLSQVQSLITNVESQLAEIRCDLERQNQEYQVLLDVRARLECEINTYRSLLESEDC
type: DOMAIN
name: IF_rod_dom
description: Intermediate filament, rod domain

phrase: SEKETMQFLNDRLASYLEKVRQLERDNAELEKLIQERSQQQEPLLCPSYQSYFKTIEELQQKILCAKAENARLVVNIDNAKLASDDFRSKYQTEQSLRLLVESDINSIRRILDELTLCKSDLESQVESLREELICLKKNHEEEVNTLRSQLGDRLNVEVDTAPTVDLNQVLNETRSQYEALVEINRREVEQWFATQTEELNKQVVSSSEQLQSCQAEIIELRRTVNALEIELQAQHNLRDSLENTLTESEAHYSSQLSQVQSLITNVESQLAEIRCDLERQNQEYQVLLDVRARLECEINTYRSLLESEDC
type: DOMAIN
name: IF_rod_dom
description: Intermediate filament, rod domain
Protein sequence:
MGTTMLAEPRTLTKAELAELLFERVGLNKREAKDIVDTFFEEIRDALARGDSVKLSGFGNFQVRDKPPRPGRNPKTGETIPIAARRVVTFHASQKLKSVVEQPSSPPDPASAE

Annotated regions:
phrase: GFGNFQVRDKPPRPGRNPK
type: CONSERVED_SITE
name: Histone-like_DNA-bd_CS
description: Histone-like DNA-binding protein, conserved site
Protein sequence:
MAEKYVIAIDEGTTSARAIVFDKELNILGIGQNEFTQYYPQPGYVEHSPEEIWQAQLLAINKALEKAKIDRNNILSIGITNQRETTVMWDTRTGKPIYNAIVWQDRRTAPITDYLKANYLRLIKDRTGLVPDPYFSASKIKWILDNIPNAREKAEKGEIKFGTIDTYLIWKLTNGKAHVTDYSNASRTMLFNIRKLEWDREILEILNIPEAILPDVKPSSEIYGYAEILNSSIPISGDAGDQQAALFGQIAFNQGDVKCTYGTGSFILLNTGSNLVSSNDLLTTIAWGVGKGITYALEGSIFITGAAVQWFRDGLRAIDVSDEIEPLAGSVPDNGGVYFVPAFTGLGAPYWDPYARGLIIGITRGTTKAHIARAILESMAYQTMDVLGIMQRDSGIKIDALKVDGGASKNDLLMQFQADILKMKVVRPKIMETTSMGVAMLAGLSVGYWNSMDELKQKWKIDQVFEPKMDDEYREKLYSGWKEAVRRALGWAKTIGG

Annotated regions:
phrase: GLIIGITRGTTKAHIARAIL
type: CONSERVED_SITE
name: Carb_kinase_FGGY_CS
description: Carbohydrate kinase, FGGY, conserved site

phrase: KCTYGTGSFILLNTGSNLVSSNDLLTTIAWGVGKGITYALEGSIFITGAAVQWFRDGLRAIDVSDEIEPLAGSVPDNGGVYFVPAFTGLGAPYWDPYARGLIIGITRGTTKAHIARAILESMAYQTMDVLGIMQRDSGIKIDALKVDGGASKNDLLMQFQADILKMKVVRPKIMETTSMGVAMLAG
type: DOMAIN
name: FGGY_C
description: Carbohydrate kinase FGGY, C-terminal

phrase: YVIAIDEGTTSARAIVFDKELNILGIGQNEFTQYYPQPGYVEHSPEEIWQAQLLAINKALEKAKIDRNNILSIGITNQRETTVMWDTRTGKPIYNAIVWQDRRTAPITDYLKANYLRLIKDRTGLVPDPYFSASKIKWILDNIPNAREKAEKGEIKFGTIDTYLIWKLTNGKAHVTDYSNASRTMLFNIRKLEWDREILEILNIPEAILPDVKPSSEIYGYAEILNSSIPISGDAGDQQAALF
type: DOMAIN
name: FGGY_N
description: Carbohydrate kinase FGGY, N-terminal

phrase: YFSASKIKWILD
type: CONSERVED_SITE
name: Carb_kinase_FGGY_CS
description: Carbohydrate kinase, FGGY, conserved site
Protein sequence:
MTLVDKFVTHVISESSFEEMDRIYLTNRVLARVGEGVLEVETNLDKLIDLKDQLVEEAVRLETIEDSQTAREILGTELMDLVTPCPSQVNRDFWEAYAYSPEQAIEDFYQLSRKNDYIKLKAIAKNIAYRVPSDYGELEITINLSKPEKDPKEIAVAKLVQASNYPQCQLCLENEGYHGRVNHPARSNHRIIRFEMVGQEWGFQYSPYAYFNEHCIFLDGQHRPMAISRQSFERLLAIVEQFPGYFAGSNADLPIVGGSILTHDHYQGGRHVFPMELAPLQKTFRFAGFEQVKAGIIKWPMSVLRLTSDSKEDLINLADKIFQEWRQYSDSSVQILAETDGTPHHTITPIARKRDGQFELDLVLRDNQTSAEHPDGIYHPHKDVQHIKKENIGLIEVMGLAILPPRLKEEVEQVASYLVGEAVTVADYHQEWADQLKSQHPDLTDKEKALAIVKDSVGAIFVRVLEDAGVYKQTEQGQTAFMRFVEQVGILLD

Annotated regions:
phrase: DLPIVGGSILTHDHYQG
type: CONSERVED_SITE
name: GalP_uridyl_Trfase_II_CS
description: Galactose-1-phosphate uridyl transferase, class II, conserved site

phrase: EQFPGYFAGSNADLPIVGGSILTHDHYQGGRHVFPMELAPLQKTFRFAGFEQVKAGIIKWPMSVLRLTSDSKEDLINLADKIFQEWRQYSDSSVQILAETDGTPHHTITPIARKRDGQFELDLVLRDNQTSAEHPDGIYHPHKDVQHIKKENIGLIEVMGLAILPPRLKEEVEQVASYLVGEAVTVADYHQEW
type: DOMAIN
name: GalP_Utransf_C
description: Galactose-1-phosphate uridyl transferase, C-terminal

phrase: SFEEMDRIYLTNRVLARVGEGVLEVETNLDKLIDLKDQLVEEAVRLETIEDSQTAREILGTELMDLVTPCPSQVNRDFWEAYAYSPEQAIEDFYQLSRKNDYIKLKAIAKNIAYRVPSDYGELEITINLSKPEKDPKEIAVAKLVQASNYPQCQLCLENEGYHGRVNHPARSNHRIIRFEMVGQEWGFQYSPYAYFNEHCIFLDGQHR
type: DOMAIN
name: GalP_Utransf_N
description: Galactose-1-phosphate uridyl transferase, N-terminal
Protein sequence:
MTQVPDNLKYNRTHEWTRLEDDGTLTIGITDHAQSELGDLVFVETPTVGRHYDAEEACAVVESVKAASDIYAPVGGEVIEANSELQDSPELVNTDPYGEGWIMRIRPDDSDDLEQLLDPEDYQDLVADEE

Annotated regions:
phrase: TLTIGITDHAQSELGDLVFVETPTVGRHYDAEEACAVVESVKAASDIYAPVGGEVIEANSELQDSPELVNTDPYGEGWIMRI
type: DOMAIN
name: Biotin_lipoyl
description: Biotin/lipoyl attachment
Protein sequence:
MGDILGAVYDLGHRPYLARRTVYEDRLILSTHGNVCRAINLLTHDNRTTLVYHNNTKRIRFRGLLCAYRVPYCGFRALCRVMLCSLPRLCDIPINGSRDFVADPTRLDSSVNELLVSNGLVTHYDRVHNVPIHTDGFEVVDFTTVFRGPGNFLLPNATNFPRSTTTDQVYMVCLVNTVNCVLRFESELVVWVHSGLYAGDVLDVDNNVIQAPDGVDDND

Annotated regions:
Protein sequence:
MEQQRIEVVGKLGSTYGIRGWLRLYSSTEQAESIFDYQPWFLKIKGQWQPIELESWKFHNHELIVKLKGINEREVAQTLANVEIGVNLSIFPLLDEGDFYWHDLIGCQVVNLQGYAMGVVSEMMETGANDVLVVRASTKDAFGKKERLIPFLYEQVVKRVDLSSKTIEVDWDAGF

Annotated regions:
phrase: VVGKLGSTYGIRGWLRLYSSTEQAESIFDYQPWFLKIKGQWQPIELESWKFHNHELIVKLKGINEREVAQTLANVEIGV
type: DOMAIN
name: RimM_N
description: RimM, N-terminal

phrase: WHDLIGCQVVNLQGYAMGVVSEMMETGANDVLVVRASTKDAFGKKERLIPFLYEQVVKRVDLSSKTIEVDWDA
type: DOMAIN
name: PRC_RimM
description: Ribosome maturation factor RimM, PRC barrel domain
Protein sequence:
MITRPVAAALSCRQCRSAILRAVVSRPTASSLRTLPQRQARQLPILTRRFFSEEKTIEPKGERVAEVLVTPDNAPETKDTAESDDVPWFLEVEPPRHPESQHKVELPKIPEDAPEVIGPMIKYIFEDMGLDDISLLDLRDLDPPAALGPNLIMLFGTARSERHLHISSGRFVRWLRKNHSIAARADGLIGPGELRTKLRRLRKKAKLLGTNTAIIPGGDNGISTGWVCVHFSSSGDNINEAASFDDSGRFSGFGAPQTGTTVVVQCMTEARRGELDLETLWQAILKKNLQENKKARGEKFADAEELNKVLASKIQLPSSASALQWQAMQKASQQHRSYSTSARRLSPSLEREQPASNLLNEEPEFAEEPVVLDLALVQKHIQDIQLIGTPMTQEMLYNLIKGAMMTPSPNNAAKDRLSLVDQILLTAEERGMEIWNDEMFVTLIEAGLLSPCYGLEIQRAQKNLEYLMKQKGCQFNGDQVLRLMNAYAYQKDWDRFWDAFRMPPRFKMARESQHYELAYRAMALTSSQKMCIAALRWVYPEMMSQDPPILLVSPLYDSLKACLTVADPGALTWMHNASETKLINLRPVQRRRLENREFLKVMREVESIRAELMRAGLVQSESGALHQ

Annotated regions: