nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MLSAIILAAGKGTRMRSVLPKVLQPLGGRPLLHHVIDTAQSLQARQTVVVAGFGLEAVQAACQHHSLVWAVQAQQLGTGHAVAQAIDHIQNDETALILYGDVPLIQTGTLARLVDLVDDVHPLALLTVHLDDPTGYGRIVRDASGNMQRIVEQKDATPAERAIAEVNTGIMAVKGVQLRGWLAKLQNNNSQGEYYLTDIIAMAVADGFMVRSTQASSEMEVLGVNDKAQLAGLERLYQAEQVMALMKAGVTVIDPARVDIRGEVSVGMDCAIDVNVVLSGKVVLGNNVSIGAGCVLHNVTLGDGVKLNPYSVLEDCTIGADSRVGPFARVRPGTVTQDHAHIGNFVELKNAQLGSGAKVNHLSYVGDASVGAKANIGAGTITCNYDGVNKHRTVIGEGAFVGSNSALVAPVTVGAGATIGAGSVITKDTPDDQLTLARAKQVTIATWQRPVKK

Annotated regions:
phrase: GVTVIDPARVDIRGEVSVGMDCAIDVNVVLSGKVVLGNNVSIGAGCVLHNVTLGDGVKLNPYSVLEDCTIGADSRVGPFARVRPGTVTQDHAHIGNFVELKNAQLGSGAKVNHLSYVGDASVGAKANIGAGTITCNYDGVNKHRTVIGEGAFVGSNSALVAPVTVGAGATIGAGSVITKDTPDDQLTLARAK
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain

phrase: TVIGEGAFVGSNSALVAPVTVGAGATIGAGSVIT
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: NVTLGDGVKLNPYSVLEDCTIGADSRVGPFARV
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: AIILAAGKGTRMRSVLPKVLQPLGGRPLLHHVIDTAQSLQARQTVVVAGFGLEAVQAACQHHSLVWAVQAQQLGTGHAVAQAIDHIQNDETALILYGDVPLIQTGTLARLVDLVDDVHPLAL
type: DOMAIN
name: MobA-like_NTP_Trfase
description: MobA-like NTP transferase
Protein sequence:
MGETIAKDVTELIGNTPLVYLNRVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKGLITPGKSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSMERRIILKAFGAELILTDPLLGMKGAVQKAEELAAKTNNSFILQQFENPANPKIHYETTGPEIWKGTGGKVDGLVSGIGTGGTITGAGRYLREQNPDIKIYGVEPVESAVLSGGKPGPHKIQGIGAGFVPGVLDVDLINETVQVSSDEAIEMAKALALKEGLLVGISSGAAAAAAVRLAQRPENEGKLFVVVFPSFGERYLSSVLFQSIKKEAENMVVE

Annotated regions:
phrase: VTELIGNTPLVYLNRVTDGCVGRVAAKLESMEPCSSVKDRIGYSMITDAEEKGLITPGKSVLIEPTSGNTGIGLAFMAAAKGYRLVLTMPASMSMERRIILKAFGAELILTDPLLGMKGAVQKAEELAAKTNNSFILQQFENPANPKIHYETTGPEIWKGTGGKVDGLVSGIGTGGTITGAGRYLREQNPDIKIYGVEPVESAVLSGGKPGPHKIQGIGAGFVPGVLDVDLINETVQVSSDEAIEMAKALALKEGLLVGISSGAAAAAAVRLAQRPENEGKLFVVV
type: DOMAIN
name: TrpB-like_PALP
description: Tryptophan synthase beta chain-like, PALP domain

phrase: KLESMEPCSSVKDRIGYS
type: BINDING_SITE
name: P-phosphate_BS
description: Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site
Protein sequence:
MEKLIEETLVPGGPFNLSVGGWVRDKVRTIVENVWEVRDVVTTTQKRAISLVIPRPAFTQTQVSDHPALHAISRYTTSKWIEWGRAEDLHVLLDPSPRLLRIADKGGHRWVALCLDRSAHKLLTARVESAGDKWHADYVSALSGRASGKFYTHASDVPQGGRLVADRTLLGLTPRQCEKMMLAAGINLGVAVTLWPTALSHHEVEMWDDLELTWRYERDSQCPLTCGGYGVGRAPGAVRPCTTRIICVNATSSHPGKLYTCAPKHWVRECCNGRLYWEVATEVGHQARIRMLLGGAPVQQVRRLGASARVRLPDLIHLAETGKWRWFSLPRAVFQRMLSYCKTLSPDAYYSERVFKFKNALSHSITLAGQLLQEGWKGSCAEEDALCAYVAFRAWQSNARLADIMRAAKGSAGSKLTVAGWLTWLWDAIKRFFGRVPLPEKMEKWESEERYVIRERPGEVEPPPPTLSDGKLPSLAMPTAGWLAPVVDQQPHCACSRYDIDPAPEQHVESDEGPLVPAWLFSKAPRKLRVRTWDWEALRVRAEEPALPAPHLPRMRARDPPTVARLPPGGSAWVTLAEPTTCARWICLCWESGEPVRPLETAVAGRGPMNRACGVQGCSFVRLYVPSERRWDEGGYQNWNNLARRCASVARQLGGATVVHLPPSDGRAEDLLSLMLRVAAYENAPLAVSLCDRLASDLTESDRERAAALVSQYAPSSQIDTKPVTAARDASLTKAQESASALAADPPLAPPLPSKYSAFAHPLTEGEI

Annotated regions:
phrase: AFTQTQVSDHPALHAISRYTTSKWIEWGRAEDLHVLLDPSPRLLRIADKGGHRWVALCLDRSAHKLLTARVESAGDKWHADYVSALSGRASGKFYTHASDVPQGGRLVADRTLLGLTPRQCEKMMLAAGINLGVAVTLWPTALSHHEVEMWDDLELTWRYERDSQCPLTCGGYGVGRAPGAVRPCTTRIICVNATSSHPGKLYTCAPKHW
type: DOMAIN
name: Alphavirus-like_MT_dom
description: Alphavirus-like methyltransferase domain
Protein sequence:
MTTIWEHCVDVDGEVAASTGCFTTLPIRIHRRNDIADDATKQSIHDWGAYVGDGWEQRSGSSWSPVGNWGAFIFPESLPDRLGVITYLANMGNIHDDLCDELPFEEALKEHSNLSQAMEVSNSDTRQCSKASDRSMKMKKYISKCLLEAMEIDRARALRMINSYRSKWLDVMESQNVNDMQTLEEYLAFRNLNGGMEAFWSMVEFGMAIDISESEKTHTRPLFQAAESALVLTNDYWSWDREWRLAQRTQDPRIVNAVHLFMRTEGLSVDQAREKVRERIVDYEREYLRLKEEFYTQNPNLPLYLRRYVEVCGVITAGNHYWCANCPRHHAWRDEESSPSERSFSPSNEGIEDPRLSPGASTTSSMSQKSSPATEITLSDVLGFMAINDNHKPQRSSDMALMAPVQYIRSMPSKGLRSLMVEALDQWLLVDDPELEQIKNIIDLLHNSSLILDDIEDDSPLRRGLPATHTVFGQAQSINSANFMFVQAVQMTQKLNNPASLDTLLDELECLFIGQSWDLYWKFHLQVPTEKEYLEMVDCKTGAMFRLLARLMFHESSVVSGTQVLQLLDEMCRLFGRFFQIRDDFMNLYSTEYSDQKGFCEDLDEGKMSYPLIMLLWQNPGQRDQIMGIFRQQASNTSRGPTSDRSRLPLETKRYVMSLLKGSDIMASTLRKLRDLEAAVDYSISGLEKALGDANPVMRIVLSRLSVRDVSL

Annotated regions:
phrase: LILDDIEDDSPLRR
type: CONSERVED_SITE
name: Polyprenyl_synt_CS
description: Polyprenyl synthetase, conserved site

phrase: FGRFFQIRDDFM
type: CONSERVED_SITE
name: Polyprenyl_synt_CS
description: Polyprenyl synthetase, conserved site
Protein sequence:
MALIPYALARPFLFSLDPETAHELTVRALALTQGTALQLAYGTSRVNDPITLAGLTFPNRVGLAAGLDKNARCIDGLGAMGFGFVEVGTVTPLAQPGNPRPRLFRLPQAQALINRFGFNNEGLASFMANVKNSTFYRQRQNPNLARKPLPLLLGLNIGKNAATPIERATEDYLTCLDGVYPYADYVAVNISSPNTRNLRSLQSDEALDSLLGAIAHRRQALVAQHGKQTPIFVKIAPDLDASQVDVIAASLRRHGMDGVIATNTTLSRDAVKGLAHADETGGLSGAPVLAMSNRVIGQLRAALGPGFPIIGVGGVMSADDAVSKIRAGADLVQIYTGLIYHGPKLVKQAAALIKTSC

Annotated regions:
phrase: TLAGLTFPNRVGLAAGLDKNARCIDGLGAMGFGFVEVGTVTPLAQPGNPRPRLFRLPQAQALINRFGFNNEGLASFMANVKNSTFYRQRQNPNLARKPLPLLLGLNIGKNAATPIERATEDYLTCLDGVYPYADYVAVNISSPNTRNLRSLQSDEALDSLLGAIAHRRQALVAQHGKQTPIFVKIAPDLDASQVDVIAASLRRHGMDGVIATNTTLSRDAVKGLAHADETGGLSGAPVLAMSNRVIGQLRAALGPGFPIIGVGGVMSADDAVSKIRAGADLVQIYTGLIYHGPKLVKQ
type: DOMAIN
name: Dihydroorotate_DH_cat
description: Dihydroorotate dehydrogenase, catalytic

phrase: GFVEVGTVTPLAQPGNPRP
type: CONSERVED_SITE
name: Dihydroorotate_DH_CS
description: Dihydroorotate dehydrogenase, conserved site

phrase: IIGVGGVMSADDAVSKIRAG
type: CONSERVED_SITE
name: Dihydroorotate_DH_CS
description: Dihydroorotate dehydrogenase, conserved site
Protein sequence:
MDILLLVKAAIMGIVEGLTEFLPISSTGHLILTASLLNFTGEIVKVFDIAIQTGAMFAVIWEYRVRLRATVAGITHEAVAQRFVRNLLIAFVPAVISGLALGGLIKEHLFHPVPVATAFVVGGLIILWVERRHRALFGDRDLEGGRVARVETIDDMSALDALKVGLVQCAALIPGTSRSGATIIGAMLFGFSRKAATEFSFFLGIPTLMGAGAYSLIKQRDLLSWGDLPVFAVGVVFAFLSALVCIRWLIRYVSTHDFTVFAWYRIAFGGLVLLSAWGGWVDWKD

Annotated regions:
Protein sequence:
MSTVFPEDSVGLVVPQTARFDEPLALACGRSLASYELVYETYGTLNASASNAVLICHALSGHHHAAGYHAATDRKPGWWDSCIGPGKPIDTNRFFVVSLNNLGGCNGSTGPSSVNPATGKPYGAEFPVLTVEDWVHSQARLADRLGIQQWAAIVGGSLGGMQALQWTMTYPERVRHCVDIASAPKLSAQNIAFNEVARQAILTDPEFHGGSFQDQGVIPKRGLMLARMVGHITYLSDDSMGEKFGRELKSDKLNYDFHSVEFQVESYLRYQGEEFSGRFDANTYLLMTKALDYFDPAATHGGDLAATLAHVKADYCIMSFTTDWRFSPARSREIVDALMAARKNVCYLEIDSPYGHDAFLIPTPRYMQGFSNYMNRIAI

Annotated regions:
phrase: NAVLICHALSGHHHAAGYHAATDRKPGWWDSCIGPGKPIDTNRFFVVSLNNLGGCNGSTGPSSVNPATGKPYGAEFPVLTVEDWVHSQARLADRLGIQQWAAIVGGSLGGMQALQWTMTYPERVRHCVDIASAPKLSAQNIAFNEVARQAILTDPEFHGGSFQDQGVIPKRGLMLARMVGHITYLSDDSMGEKFGRELKSDKLNYDFHSVEFQVESYLRYQGEEFSGRFDANTYLLMTKALDYFDPAATHGGDLAATLAHVKADYCIMSFTTDWRFSPARSREIVDALMAARKNVCYLEIDSPYGHDA
type: DOMAIN
name: AB_hydrolase_1
description: Alpha/beta hydrolase fold-1
Protein sequence:
MENHKSNNTKENITIVDISRKINQLPEAERNLLEHGSVYVGLNAALCGLIANSLFRRILNVTKARIAAGLPMAWIPFLTTDITYRCFVSFPLNTGDLDCETCTITRSGLIGLVIGGLYPVFLAIPVNGGLAARYQSALLPHKGNILSYWIRTSKPVFRKMLFPIMLQTMFSAYLGSEQYKLLIKALQLSEPGKEIH

Annotated regions:
Protein sequence:
MSKHKVSPATIAKNKKALHDYTILEKFEAGIVLQGWEVKSIRAGKVQMVDSHVHIKHGEAWLFNCLITPLLSASTHVVADAAATRKLLLNRREINKIMGRIEQKGFTCVPLAMYWKGPRVKVEIALAQGKKVHDKRQAQKDKDWAREKDRLFKKAYK

Annotated regions:
phrase: AGIVLQGWEVKS
type: CONSERVED_SITE
name: SsrA-bd_prot_CS
description: SsrA-binding protein, conserved site
Protein sequence:
MNIQDMILTLQKHWSSQGCVLMQAYDVEKGAGTMSPYTFLRSIGPEPWKVAYVEPSRRPADGRYGENPNRLYQHHQFQVIIKPSPDNIQELYLDSLRALGIDPLEHDIRFVEDNWENPSLGCAGLGWEVWLDGMEITQFTYFQQVGGLECKPVSVEITYGIERLASYIQDKENVFDLEWTSGFTVKDLFMMAEYEHSVYTFETSDVDMLFQLFSTYEKEAIKQMDNGLVHPAYDYVLKCSHTFNLLDAKGAISVTERTGYIARVRNLARKVAKTYYEEREKLGFPMLKGEGSSHE

Annotated regions:
Protein sequence:
MAEERQQRGRDRDRNREEKVDDGMIEKLVAVNRVSKTVKGGRQFTFTALTVVGDGEGKVGFGYGKAREVPVAIQKSMEQARKNLVSVDLNNGTLWHTIKDGHGAARVFMQPASEGTGVIAGGAMRAVLEAVGVKNVLAKATGSRNPINLVRATVKGLSAAQSPARIAAKRGKKVEELNHG

Annotated regions:
phrase: HGAARVFMQPASEGTGVIAGGAMRAVLEAVGVKNVLAKATGSRNPINLVRATVKGLSAAQSPARIAAK
type: DOMAIN
name: Ribosomal_uS5_C
description: Small ribosomal subunit protein uS5, C-terminal

phrase: GRQFTFTALTVVGDGEGKVGFGYGKAREVPVA
type: CONSERVED_SITE
name: Ribosomal_uS5_N_CS
description: Small ribosomal subunit protein uS5, N-terminal, conserved site

phrase: IEKLVAVNRVSKTVKGGRQFTFTALTVVGDGEGKVGFGYGKAREVPVAIQKSMEQARKNLVS
type: DOMAIN
name: Ribosomal_uS5_N
description: Small ribosomal subunit protein uS5, N-terminal

phrase: MIEKLVAVNRVSKTVKGGRQFTFTALTVVGDGEGKVGFGYGKAREVPVAIQKSMEQARKNLVS
type: DOMAIN
name: Ribosomal_uS5_N
description: Small ribosomal subunit protein uS5, N-terminal
Protein sequence:
MLEGPILAVSRQTKSVVDIPGAPQRYSFAKVSAPIEVPGLLDLQLDSYSWLIGTPEWRARQKEEFGEGARVTSGLENILEELSPIQDYSGNMSLSLSEPRFEDVKNTIDEAKEKDINYAAPLYVTAEFVNNTTGEIKSQTVFIGDFPMMTDKGTFIINGTERVVVSQLVRSPGVYFDQTIDKSTERPLHAVKVIPSRGAWLEFDVDKRDSVGVRIDRKRRQPVTVLLKALGWTTEQITERFGFSEIMMSTLESDGVANTDEALLEIYRKQRPGEQPTRDLAQSLLDNSFFRAKRYDLARVGRYKINRKLGLGGDHDGLMTLTEEDIATTIEYLVRLHAGERVMTSPNGEEIPVETDDIDHFGNRRLRTVGELIQNQVRVGLSRMERVVRERMTTQDAESITPTSLINVRPVSAAIREFFGTSQLSQFMDQNNSLSGLTHKRRLSALGPGGLSRERAGIEVRDVHPSHYGRMCPIETPEGPNIGLIGSLASYARVNPFGFIETPYRRIIDGKLTDQIDYLTADEEDRFVVAQANTHYDEEGNITDETVTVRLKDGDIAMVGRNAVDYMDVSPRQMVSVGTAMIPFLEHDDANRALMGANMQKQAVPLIRAEAPFVGTGMEQRAAYDAGDLVITPVAGVVENVSADFITIMADDGKRETYLLRKFQRTNQGTSYNQKPLVNLGERVEAGQVIADGPGTFNGEMSLGRNLLVAFMPWEGHNYEDAIILNQNIVEQDILTSIHIEEHEIDARDTKLGAEEITRDIPNVSEEVLKDLDDRGIVRIGADVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSMKVPHGETGKVIGVRHFSREDDDDLAPGVNEMIRIYVAQKRKIQDGDKLAGRHGNKGVVGKILPQEDMPFLPDGTPVDIILNTHGVPRRMNIGQVLETHLGWLASAGWSVDPEDPENAELVKTLPADLLEVPAGSLTATPVFDGASNEELAGLLANSRPNRDGDVMVNADGKATLIDGRSGEPYPYPVSIGYMYMLKLHHLVDEKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWAMQAYGAAYTLQELLTIKSDDVVGRVKVYEAIVKGENIPDPGIPESFKVLLKELQSLCLNVEVLSADGTPMELAGDDDDFDQAGASLGINLSRDERSDADTA

Annotated regions:
phrase: GGQRFGEMEVWAMQAYGAAYTLQELLTIKSDDVVGRVKVYEAIVKGENIPDPGIPESFKVLLKELQSLCLNVEV
type: DOMAIN
name: RNA_pol_Rpb2_7
description: RNA polymerase Rpb2, domain 7

phrase: YRRIIDGKLTDQIDYLTADEEDRFVVAQANTHYDEEGNITDETVTVRLKDGDIAMVGRNAVDYMDV
type: DOMAIN
name: DNA-dir_RNA_pol_bsu_external_1
description: DNA-directed RNA polymerase, beta subunit, external 1 domain

phrase: QFMDQNNSLSGLTHKRRLSALGPGGLSRERAGIEVRDVHPSHYGRMCPIETPEGPNIGLIGSLASYAR
type: DOMAIN
name: RNA_pol_Rpb2_3
description: RNA polymerase Rpb2, domain 3

phrase: VAGVVENVSADFITIMADDGKRETYLLRKFQRTNQGTSYNQKPLVNLGERVEAGQVIADGPGTFNGEMSLGRNLLVAFMPWEGHNYEDAIILNQNIVEQDILTSIHIEEHEIDARDTKLGAEEITRDIPNVSEEVLKDLDDRGIVRIGADVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSMKVPHGETGKVIGVRHFSREDDDDLAPGVNEMIRIYVAQKRKIQDGDKLAGRHGNKGVVGKILPQEDMPFLPDGTPVDIILNTHGVPRRMNIGQVLETHLGWLASAGWSVDPEDPENAELVKTLPADLLEVPAGSLTATPVFDGASNEELAGLLANSRPNRDGDVMVNADGKATLIDGRSGEPYPYPVSIGYMYMLKLHHLVDEKIHARSTGPYSMITQQPLGGKA
type: DOMAIN
name: DNA-dir_RNAP_su2_dom
description: DNA-directed RNA polymerase, subunit 2, hybrid-binding domain

phrase: LLDLQLDSYSWLIGTPEWRARQKEEFGEGARVTSGLENILEELSPIQDYSGNMSLSLSEPRFEDVKNTIDEAKEKDINYAAPLYVTAEFVNNTTGEIKSQTVFIGDFPMMTDKGTFIINGTERVVVSQLVRSPGVYFDQTIDKSTERPLHAVKVIPSRGAWLEFDVDKRDSVGVRIDRKRRQPVTVLLKALGWTTEQITERFGFSEIMMSTLESDGVANTDEALLEIYRKQRPGEQPTRDLAQSLLDNSFFRAKRYDLARVGRYKINRKLGLGGDHDGLMTLTEEDIATTIEYLVRLHAGERVMTSPNGEEIPVETDDIDHFGNRRLRTVGELIQNQVRVGLSRMERVVRERMTTQDAESITPTSLINVRPV
type: DOMAIN
name: RNA_pol_bsu_protrusion
description: RNA polymerase, beta subunit, protrusion

phrase: GDKLAGRHGNKG
type: CONSERVED_SITE
name: RNA_pol_bsu_CS
description: RNA polymerase, beta subunit, conserved site

phrase: RSPGVYFDQTIDKSTERPLHAVKVIPSRGAWLEFDVDKRDSVGVRIDRKRRQPVTVLLKALGWTTEQITERFGFSEIMMSTLESDGVANTDEALLEIYRKQRPGEQPTRDLAQSLLDNSFFRAKRYDLARVGRYKINRKLGLGGDHDGLMTLTEEDIATTIEYLVRLHAGERVMTSPNGEEIPVETDDIDHFGNRRL
type: DOMAIN
name: RNA_pol_Rpb2_2
description: RNA polymerase Rpb2, domain 2
Protein sequence:
MFDIEKFWQHFNDEMRARFNEVAYNAWFKNTKPIFYNKNTHELKILVQNPVAKGYWEKNLSSQLIQSAYGYAGIEILPVFQINENNDSPERIVTPEPRYAIQLQQEKRAHKQFTKNLKLNEKYTFDNFVQGEGNKLAAGAALAVADSPGSFYNPLFIFGGVGLGKTHLMQAIGHQMLAERPNAKVVYIQSETFVNDFINSIKNKTQDQFREKYRTCDLLLVDDIQFFAKKEGIQEEFFHTFETLYNDQKQIVMTSDRLPTEIPDLSERLVSRFTWGLQVEITPPDLETRIAILRRKAEAEGLVIDDNTLDYIASQVDTNIRELEGALVKVQAYATIERADINVNLAREALVDLKLVQKNRGLQISKIQEVVANYFQTSTAELKGKKRVRQIVVPRQIAMYLSRELTDASLPKIGQEFGGKDHTTVMHAYDKIDKQIKTDTEIKSAVFDLKQMIEH

Annotated regions:
phrase: QISKIQEVVANYFQTSTAELKGKKRVRQIVVPRQIAMYLSRELTDASLPKIGQEFGGKDHTTVMHAYDK
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: FYNPLFIFGGVGLGKTHLMQAIGHQMLAERPNAKVVYIQSETFVNDFINSIKNKTQDQFREKYRTCDLLLVDDIQFFAKKEGIQEEFFHTFETLYNDQKQIVMTSDRLPTEIPDLSERLVSRFTWGLQV
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: ISKIQEVVANYFQTSTAELKGKKRVRQIVVPRQIAMYLSRELTDASLPKIGQEFGGKDHTTVMHAYDK
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: ISKIQEVVANYFQTSTAELKGKKRVRQIVVPRQIAMYLSRELTDASLPKIGQEFGGKDHTTVMHAYDKIDKQIKTDTEIKSAVFDLKQM
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: IGQEFGGKDHTTVMHAYDK
type: CONSERVED_SITE
name: Chromosome_initiator_DnaA_CS
description: Chromosomal replication control, initiator DnaA, conserved site

phrase: LNEKYTFDNFVQGEGNKLAAGAALAVADSPGSFYNPLFIFGGVGLGKTHLMQAIGHQMLAERPNAKVVYIQSETFVNDFINSIKNKTQDQFREKYRTCDLLLVDDIQFFAKKEGIQEEFFHTFETLYNDQKQIVMTSDRLPTEIPDLSERLVSRFTWGLQ
type: DOMAIN
name: DnaA_dom
description: Chromosomal replication initiator protein DnaA, ATPAse domain
Protein sequence:
MAVFTPVTNAEIALWLEQYDVGTVRALRGIPSGIENTNFFLTTEKDGATHEYVVTLFERLTSEQLPFYLYLMQHLAQHGICVPAPIPGRDGAILRPLKGKPATIVTRLPGRSNLAPTTSECAIVGDMLARMHLAGRDYPRHQPNLRSLPWWNEVVPDIQPFVQGATRELLVAELAHQQRFFGSADYAALPEGPCHCDLFRDNVLFEPATDSQPERLGGFFDFYFAGVDKWLFDVAVTVNDWCVDLATGALDAERMRAMLRAYHAVRPFTDAEARHWRDMLRAAAYRFWVSRLWDFHLPRDAELLQPHDPTHFERVLRERVRAEGLTLDIPEPCN

Annotated regions:
phrase: LRGIPSGIENTNFFLTTEKDGATHEYVVTLFERLTSEQLPFYLYLMQHLAQHGICVPAPIPGRDGAILRPLKGKPATIVTRLPGRSNLAPTTSECAIVGDMLARMHLAGRDYPRHQPNLRSLPWWNEVVPDIQPFVQGATRELLVAELAHQQRFFGSADYAALPEGPCHCDLFRDNVLFEPATDSQPERLGGFFDFYFAGVDKWLFDVAVTVNDWCVDLATGALDAERMRAMLRAYHAVRP
type: DOMAIN
name: Aminoglycoside_PTrfase
description: Aminoglycoside phosphotransferase
Protein sequence:
MPEVSPMAFLISSAYLLGSIPFGLLLAKLFGGMDVRKVGSGNIGATNVARVVGPLAGTLTLVFDTAKGAAAVWLAGRFTNESATWMMMAAIAVLLGHCFPIWIRFRGGKGVATALGVFLALCPLAAVVALLLFLLCVAYWRFVSLGSIAAAAAMPLLIYFLWAPRHAPPIIVNVGTLAIALLVIYKHDGNLQRLVEGTMTRIAILGGGGWGTALAIVLSRSRMPHEISLWVHNAGLAESIGRDRENKTYLPGSKLPESVRVHPKLETALSGAQVIVGATPSADARAVYVSALPFLVSGASFVSASKGLEPSTHLRMSEVIAQVVSPKFAPRIAVISGPSFAAEAARGEPTAVVLASRDAALAAELQEEFAGPAFRLYTNDDVLGVELAGAMKNVMAIAAGACQGLGLGSNALAALITRGLAEMARLAVALGARPETLSGLAGLGDLVLTCTGSLSRNRFVGIELGKGRLLLEILANMRMVAEGVNTAAPLLALAREHRIEMPITAQVDAILHAGKSPQDAIRDIMERPLKRE

Annotated regions:
phrase: DVLGVELAGAMKNVMAIAAGACQGLGLGSNALAALITRGLAEMARLAVALGARPETLSGLAGLGDLVLTCTGSLSRNRFVGIELGKGRLLLEILANMRMVAEGVNTAAPLLALAREHRIEMPITAQVDAILHAGKSPQDA
type: DOMAIN
name: G3P_DH_NAD-dep_C
description: Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal

phrase: IAILGGGGWGTALAIVLSRSRMPHEISLWVHNAGLAESIGRDRENKTYLPGSKLPESVRVHPKLETALSGAQVIVGATPSADARAVYVSALPFLVSGASFVSASKGLEPSTHLRMSEVIAQVVSPKFAPRIAVISGPSFAAEAARGEPTAVVLASRDAA
type: DOMAIN
name: G3P_DH_NAD-dep_N
description: Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal
Protein sequence:
MGVIKKPDLTDPVLRAKLAKGMGHHYYGEPAWPNDLLYMFPVCILGTIACNVGLAVLEPSLIGEPANPFATPLEILPEWYFFPVFQILRVVPNKLLGVLLMASVPVGLITVPFIENVNKFQNPFRRPVATTIFLIGTVVAVWLGIGATLPIDTSLTLGLF

Annotated regions:
phrase: PANPFATPLEILPEWYFFPVFQILRVVPNKLLGVLLMASVPVGLITVPFIENVNKFQNPFRRPVATTIFLIGTVVAVWLGIGATLPID
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: LRAKLAKGMGHHYYGEPAWPNDLLYMFPVCILGTIACNVGLAVLEPSLIGEPANPFATPLEILPEWYFFPVFQILRVVPNKLLGVLLMASVPVGLITVPFIENVNKFQNPFRRPVATTIFLIGTVVAVWLGIGATLPIDTSLTLGL
type: DOMAIN
name: Cytochrome_b_C_euk/bac
description: Cytochrome b/b6, C-terminal domain, eukaryotic/bacterial

phrase: PANPFATPLEILPEWYFFPVFQILRVVPNKLLGVLLMASVPVGLITVPFIENVNKFQNPFRRPVATTIFLIGTVVAVWLGIGATLPIDTSLTLGL
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal
Protein sequence:
MYSCLSGGLGNQMFQYAAAYILQRKLKQRSLVLDDSYFLDCSNRDTRRRFELNQFNICYDRLTTSKEKKEISIIRHVNRYRLPLFVTNSIFGVLLKKNYLPEAKFYEFLNNCKLQVKNGYCLFSYFQDATLIDSHRDMILPLFQINEDLLNLCNDLHIYKKVICENANTTSLHIRRGDYITNPHASKFHGVLPMDYYEKAIRYIEDVQGEQVIIVFSDDVKWAENTFANQPNYYVVNNSECEYSAIDMFLMSKCKNNIIANSTYSWWGAWLNTFEDKIVVSPRKWFAGNNKSKLTMDSWINL

Annotated regions:
Protein sequence:
MSTGGTIHNYYVDSLIGQETEDLYAARYAQGSHSTASRPSGVADSSDFSSCSFTSKSTAFSNPWSPVHPQSSAAVAGIYHPYMHQSHLAAGDTRYVRSWLEPLSSSVSFPGFHPNGRHYGIKPETLSSKRTECSSYELQTLSLPEFTCGSYPECREKLPKELGCTSSETTSNSEHKEEKQQQLDPNHPAINWIHARSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKKMNKVKNNEEP

Annotated regions:
phrase: NMYLTRDRRYE
type: DOMAIN
name: HD_metazoa
description: Homeodomain, metazoa

phrase: LNLTERQVKI
type: DOMAIN
name: HD_metazoa
description: Homeodomain, metazoa

phrase: WFQNRRMKM
type: DOMAIN
name: HD_metazoa
description: Homeodomain, metazoa

phrase: VARILNLTERQVKIWFQNRRMKM
type: CONSERVED_SITE
name: Homeobox_CS
description: Homeobox, conserved site

phrase: TRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKKMNKV
type: DOMAIN
name: HD
description: Homeodomain

phrase: RKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIWFQNR
type: DOMAIN
name: HD
description: Homeodomain

phrase: RSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKK
type: DOMAIN
name: HD
description: Homeodomain

phrase: RKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMK
type: DOMAIN
name: HD
description: Homeodomain

phrase: MSTGGTIHNYYVDSLIGQETEDLYAARYAQGSHSTASRPSGVADSSDFSSCSFTSKSTAFSNPWSPVHPQSSAAVAGIYHPYMHQSHLAAGDTRYVRSWLEPLSSSVSFPGFHPNGRHYGIKPETLSSKRTECSSYELQTLSLPEFTCGSYPECREKLPKELGCTSSETTSNSEHKEEKQQQLD
type: DOMAIN
name: Hox9_activation_N
description: Hox9, N-terminal activation domain
Protein sequence:
MRCPFCGHEDTQVKDSRPHEDGAAIRRRRICAACSQRFTTIERVQLRDLYVVKADDRRVPFERDKLARSVRIALRKRPVDEERIERIVNGLVRQLEASGETDIPSRDIGKLVMGTLREVDIVAYIRFASVHWDFRETKDFAAILQSIPGTADGDVPVVPGDAAAAIAAESGPGGVKRR

Annotated regions:
phrase: MRCPFCGHEDTQVKDSRPHEDGAAIRRRRICAACSQRFTTI
type: DOMAIN
name: NrdR-like_N
description: Transcriptional repressor NrdR-like, N-terminal domain

phrase: LYVVKADDRRVPFERDKLARSVRIALRKRPVDEERIERIVNGLVRQLEASGETDIPSRDIGKLVMGTLREVDIVAYIRFASVHWDFRETK
type: DOMAIN
name: ATP-cone_dom
description: ATP-cone domain

phrase: YVVKADDRRVPFERDKLARSVRIALRKRPVDEERIERIVNGLVRQLEASGETDIPSRDIGKLVMGTLREVDIVAYIRFASVHWDFR
type: DOMAIN
name: ATP-cone_dom
description: ATP-cone domain
Protein sequence:
MTQTQFQVVILATDKASGNSKLEPIDATIPHSLLPIANRPLISYQLEFLEKAGFETKSEPVIIVVNETSQEKIKQYVSEIYKGKIEVEFFVLKDQLATCEILYRIRDKIRLEYFMVLNANLVLEDTFIRQMADLHRKEESSLTVLLKPPTPKVEQKGKGATETSTKQDKLFTDYIALEEKSQKIVMMEPATEVEEDLNFNKSLLKYFPNVTIYTNLQDTQLYIFSRWVLDLIIEDQKEKYPLFFDIKKHLIPYLLSCQIPNIKRKRALPASAFNQNQTLSQTMSSTTSPFDQFSELNAQKNKTIKCFAHLLKKEGYCMNVNTIKNYQQINRDIAKGDLQYLPNEPKSEKNFFIDPTANVTITQVGPQCVIGTSTTLGAKCSVKFSIIGKHCKIGDGVRIENSIIMDHVIIEDRCVINSSIICNDVYIKSGSSTVGQYLTK

Annotated regions:
phrase: SKLEPIDATIPHSLLPIANRPLISYQLEFLEKAGFETKSEPVIIVVNETSQEKIKQYVSEIYKGKIEVEFFVLKDQLATCEILYRIRDKIRLEYFMVLNANLVLEDTFIRQMADLHRKEESSLTVLLKPPTPKVEQKGKGATETSTKQDKLFTDYIALEEKSQKIVMMEPATEVEEDLNFNKSLLKYFPNVTIYTNLQDTQLYIFSRWVLDLIIEDQKEK
type: DOMAIN
name: NTP_transferase_dom
description: Nucleotidyl transferase domain
Protein sequence:
MQYAKISGTGSYLPANRVSNDDLAQKVDTSDEWITARTGIKFRHIAAENEKTSDLAAEAARRALDAAGLNGNEIDLIIVATATPDMQFPSTATIVQQKLGITNGCPAFDVQAVCAGFMYALTTANAYIKSGMAKNALVIGAETFSRIVDWNDRTTCVLFGDGAGAVVLSASDTPGIIHSKLKADGNYLKLLNVPGQIACGKVSGSPYISMDGPGVFKFAVKMLSKIADDVIEEAGYTAAQIDWIVPHQANRRIIESTAKHLGLSMDKVVLTVQDHGNTSAASIPLALDTGIRSGQIKRGQNLLLEGIGGGFAWGAVLLQY

Annotated regions:
phrase: FDVQAVCAGFMYALTTANAYIKSGMAKNALVIGAETFSRIVDWNDRTTCVLFGDGAGAVVLSASDTPGIIHSKLKAD
type: DOMAIN
name: ACP_syn_III_N
description: Beta-ketoacyl-[acyl-carrier-protein] synthase III, N-terminal

phrase: EEAGYTAAQIDWIVPHQANRRIIESTAKHLGLSMDKVVLTVQDHGNTSAASIPLALDTGIRSGQIKRGQNLLLEGIGGGFAWGAVLLQ
type: DOMAIN
name: ACP_syn_III_C
description: Beta-ketoacyl-[acyl-carrier-protein] synthase III, C-terminal
Protein sequence:
MLKIYTQEQIFNLEQSATSAKGNCSSLDLCEQMSNAFCAQFQRDFKGTHRIVIFAGPGANGALALAIGRILSNFNHTIEAVVLNPSGLLSDDCLINQRRLSQNQANVNVREVTTSFNPPMIQPEDIVIDGMCGIEMNMPFEGDLANVARYVNKMAKTILSIDIPSGLMSEDNSNNNMENVIKATYTYTFHGPKLAFMLSDNAPYVGEWKVINIGLGDSQPDKRTKYYVFSSSDMEELPRREKHTCKYDYGRVALIAGSQGMMGAAILAGRACMRSGAGHLTVHIPNGTEHIIHTSLPEAVISRDKHSEYFTMFDNAHIYDAIAIGPGLGRNFDSAAALEGLLCYYKKPIIIDADAIHLLASNKSLLNKLPEDSILTPHVGEFDALVGTSSNDYERLMKASQIAVDHRVNIILKGAYTAVCSKSGRIIFNTSGNPGMATAGTGDVLTGTLLALLGRGHSPLVASLFGTFINGYAGNLYANDFSEESLIASDIIDYLPKVFKYFKSSDSFYGM

Annotated regions:
phrase: DLCEQMSNAFCAQFQRDFKGTHRIVIFAGPGANGALALAIGRILSNFNHTIEAVVLNPSGLLSDDCLINQRRLSQNQANVNVREVTTSFNPPMIQPEDIVIDGMCGIEMNMPFEGDLANVARYVNKMAKTILSIDIPSGLMSEDNSNNNMENVIKATYTYTFHGPK
type: DOMAIN
name: YjeF_N_dom
description: YjeF N-terminal domain

phrase: AGTGDVLTGT
type: CONSERVED_SITE
name: Carbohydrate_kinase_pred_CS
description: Carbohydrate kinase, predicted, conserved site

phrase: IFNLEQSATSAKGNCSSLDLCEQMSNAFCAQFQRDFKGTHRIVIFAGPGANGALALAIGRILSNFNHTIEAVVLNPSGLLSDDCLINQRRLSQNQANVNVREVTTSFNPPMIQPEDIVIDGMCGIEMNMPFEGDLANVARYVNKMAKTILSIDIPSGLMSEDNSNNNMENVIKATYTYTFHGPKLAFMLSDNAPYVGEWKVINIGLGDSQP
type: DOMAIN
name: YjeF_N_dom
description: YjeF N-terminal domain

phrase: FSSSDMEELPRREKHTCKYDYGRVALIAGSQGMMGAAILAGRACMRSGAGHLTVHIPNGTEHIIHTSLPEAVISRDKHSEYFTMFDNAHIYDAIAIGPGLGRNFDSAAALEGLLCYYKKPIIIDADAIHLLASNKSLLNKLPEDSILTPHVGEFDALVGTSSNDYERLMKASQIAVDHRVNIILKGAYTAVCSKSGRIIFNTSGNPGMATAGTGDVLTGTLLALLGRGHSPLVASLFGTFINGYAGNLYANDFSEESLIASDIIDYLPKVFKY
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: SDMEELPRREKHTCKYDYGRVALIAGSQGMMGAAILAGRACMRSGAGHLTVHIPNGTEHIIHTSLPEAVISRDKHSEYFTMFDNAHIYDAIAIGPGLGRNFDSAAALEGLLCYYKKPIIIDADAIHLLASNKSLLNKLPEDSILTPHVGEFDALVGTSSNDYERLMKASQIAVDHRVNIILKGAYTAVCSKSGRIIFNTSGNPGMATAGTGDVLTGTLLALLGRGHSPLVASLFGTFINGYAGNLYANDFSEESLIASDIIDYLPKVF
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: KYDYGRVALIAGSQGMMGAAILAGRACMRSGAGHLTVHIPNGTEHIIHTSLPEAVISRDKHSEYFTMFDNAHIYDAIAIGPGLGRNFDSAAALEGLLCYYKKPIIIDADAIHLLASNKSLLNKLPEDSILTPHVGEFDALVGTSSNDYERLMKASQIAVDHRVNIILKGAYTAVCSKSGRIIFNTSGNPGMATAGTGDVLTGTLLALLGRGHSPLVASLFGTFINGYAGNLYANDFSEESLIASDIIDYL
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: FSSSDMEELPRREKHTCKYDYGRVALIAGSQGMMGAAILAGRACMRSGAGHLTVHIPNGTEHIIHTSLPEAVISRDKHSEYFTMFDNAHIYDAIAIGPGLGRNFDSAAALEGLLCYYKKPIIIDADAIHLLASNKSLLNKLPEDSILTPHVGEFDALVGTSSNDYERLMKASQIAVDHRVNIILKGAYTAVCSKSGRIIFNTSGNPGMATAGTGDVLTGTLLALLGRGHSPLVASLFGTFINGYAGNLYANDFSEESLIASDIIDYLPKVFKYFK
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: AIAIGPGLGR
type: CONSERVED_SITE
name: Carbohydrate_kinase_pred_CS
description: Carbohydrate kinase, predicted, conserved site

phrase: VALIAGSQGMMGAAILAGRACMRSGAGHLTVHIPNGTEHIIHTSLPEAVISRDKHSEYFTMFDNAHIYDAIAIGPGLGRNFDSAAALEGLLCYYKKPIIIDADAIHLLASNKSLLNKLPEDSILTPHVGEFDALVGTSSNDYERLMKASQIAVDHRVNIILKGAYTAVCSKSGRIIFNTSGNPGMATAGTGDVLTGTLLALLGRGHSPLVASLFGTFINGYAGNLYANDFSEESLIASDIIDYL
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase