nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MHTWRFRRPFREPAINRTDRMRDHFSIDHKRTPRRRLSVKAILALDQGTTSSRAILFAHDGSIIGVSQKEFTQHYPKPGWVEHDATEIWTTQLAVARDVLKQHDMDVSDIEAIGITNQRETTLVWDRATGEPIHNAIVWQDRRTASDCDALRNAGHSDCVQKKTGLIIDAYFCATKLRWILDNVAGARERAENGELAFGTIDSWLFWNLTGGKLHATDVTNASRTMLWNIHTGQWDDELLALFKVPKEVLPSVHPSSHIYGETESSLFGKSIPLGGAAGDQQSALFGQNCTQPGMAKNTYGTGCFMLMNIGEEAAASPSRLLTTVACWDGGKREYAYEGSIFIAGAIVQWLRDGLGIIQSSSEVESLAASVDDTDGVYLVPAFAGLGAPHWDAYARGILVGLTRGTTKAHIARAALEGIAFQVADVLDAMRKDSGVAIEELRVDGGAAANDLLMQFQADIIGARVVRPKVIETTAAGAAYVAGLATGFWKDSADIERIWETDRVFEPQMPAEEVARRRRRWAAALERSKQWVEQEASAD

Annotated regions:
phrase: ILALDQGTTSSRAILFAHDGSIIGVSQKEFTQHYPKPGWVEHDATEIWTTQLAVARDVLKQHDMDVSDIEAIGITNQRETTLVWDRATGEPIHNAIVWQDRRTASDCDALRNAGHSDCVQKKTGLIIDAYFCATKLRWILDNVAGARERAENGELAFGTIDSWLFWNLTGGKLHATDVTNASRTMLWNIHTGQWDDELLALFKVPKEVLPSVHPSSHIYGETESSLFGKSIPLGGAAGDQQSALF
type: DOMAIN
name: FGGY_N
description: Carbohydrate kinase FGGY, N-terminal

phrase: KNTYGTGCFMLMNIGEEAAASPSRLLTTVACWDGGKREYAYEGSIFIAGAIVQWLRDGLGIIQSSSEVESLAASVDDTDGVYLVPAFAGLGAPHWDAYARGILVGLTRGTTKAHIARAALEGIAFQVADVLDAMRKDSGVAIEELRVDGGAAANDLLMQFQADIIGARVVRPKVIETTAAGAAYVAGL
type: DOMAIN
name: FGGY_C
description: Carbohydrate kinase FGGY, C-terminal

phrase: GILVGLTRGTTKAHIARAAL
type: CONSERVED_SITE
name: Carb_kinase_FGGY_CS
description: Carbohydrate kinase, FGGY, conserved site
Protein sequence:
MSSVKPLVYAVIRFLREQSQMDAYTSDEQESLEVAIQCLETVFKISPEDTHLAVSQPLTEMFTNSVCKNDIRPLSNSVPEDVGKADQLKDEGNNHMKEENYAAAVDCYTQAIELDPNNAVYYCNRAAAQSKLSHYTDAIKDCEKAIAIDSKYSKAYGRMGLALTAMNKFEEAVTSYQKALDLDPENDSYKSNLKIAEQKLREVSSPTGTGLSFDMASLINNPAFITMAASLMQNPQVQQLMSGMMTNAIGGPAAGVGGLTDLSSLIQAGQQFAQQIQQQNPELIEQLRNHIRSRSFSSSADEHS

Annotated regions:
phrase: ADQLKDEGNNHMKEENYAAAVDCYTQAIELDPN
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: AVYYCNRAAAQSKLSHYTDAIKDCEKAIAIDSK
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: SKAYGRMGLALTAMNKFEEAVTSYQKALDLDPE
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: SKAYGRMGLALTAMNKFEEAVTSYQKALDLDPE
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: KPLVYAVIRFLREQSQMDAYTSDEQESLEVAIQCLETVFKISPEDTHLAVSQPLTEMF
type: DOMAIN
name: SGTA_dimer
description: SGTA, homodimerisation domain

phrase: ADQLKDEGNNHMKEENYAAAVDCYTQAIELDPN
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: KAYGRMGLALTAMNKFEEAVTSYQKALDLDPE
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat
Protein sequence:
MMLHAQHMPGQPGAPSLVFLHGFSGDCREWQPVGEQFHGCSRLYIDLPGHGGSAAIPVGGFADVIRLLRATLISYNILKFWLVGYSLGGRVAMMAACQGIPGLCGLVVEGGHPGLQNEQARVERRLSDGRWAERFRREPLTEVFHDWYQQPVFASLTAQQRQALTALRSQNNGETLAAMLEATSLAVQPDLREALNALAFPFYYLCGERDSKFRALAQEVAATCHVIRNAGHNAHRENPAGVVDSLAQILRL

Annotated regions:
phrase: LVFLHGFSGDCREWQPVGEQFHGCSRLYIDLPGHGGSAAIPVGGFADVIRLLRATLISYNILKFWLVGYSLGGRVAMMAACQGIPGLCGLVVEGGHPGLQNEQARVERRLSDGRWAERFRREPLTEVFHDWYQQPVFASLTAQQRQALTALRSQNNGETLAAMLEATSLAVQPDLREALNALAFPFYYLCGERDSKFRALAQEVAATCHVIRNAGHNAHRENPAGVV
type: DOMAIN
name: AB_hydrolase_1
description: Alpha/beta hydrolase fold-1
Protein sequence:
MALVKAKPTSPGRRFVVTVRNKELHAGAPYEPLVEKKTRKGGRNNTGRITTRHRGGGHKQRYRVIDFRRDKDGVPGQVERLEYDPNRSANIALVLYRDGERRYIIAPRGVSAGTEIVSGVDAPIKPGNALPLRNIPVGTQVHCVELRPGKGAQLARSAGANAQLVAREGRYATVRLRSGEMRQVLAECKATVGEVGNSEHALRSLGKAGAKRHKGIRPTVRGVAMNPVDHPHGGGEGRTSGGRHPVSPWGVPTKGHKTRSNKRTDKFIVRRRKR

Annotated regions:
phrase: KPGNALPLRNIPVGTQVHCVELRPGKGAQLARSAGANAQLVAREGRYATVRLRSGEMRQVLAECKATVGEVGNSEHALRSLGKAGAKRHKGIRPTVRGVAMNPVDHPHGGGEGRTSGGRHPVSPW
type: DOMAIN
name: Ribosomal_uL2_C
description: Large ribosomal subunit protein uL2, C-terminal

phrase: PTVRGVAMNPV
type: CONSERVED_SITE
name: Ribosomal_uL2_CS
description: Large ribosomal subunit protein uL2, conserved site

phrase: IKPGNALPLRNIPVGTQVHCVELRPGKGAQLARSAGANAQLVAREGRYATVRLRSGEMRQVLAECKATVGEVGNSEHALRSLGKAGAKRHKGIRPTVRGVAMNPVDHPHGGGEGRTSGGRHPVSPWGV
type: DOMAIN
name: Ribosomal_uL2_C
description: Large ribosomal subunit protein uL2, C-terminal

phrase: GRNNTGRITTRHRGGGHKQRYRVIDFRRDKDGVPGQVERLEYDPNRSANIALVLYRDGERRYIIAPRGVSAGTEIV
type: DOMAIN
name: Ribosomal_uL2_RNA-bd_dom
description: Large ribosomal subunit protein uL2, RNA-binding domain
Protein sequence:
MRINPTTSGPGVSTLDEKTLGRIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPVDNLGPVDTRTKSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGELDSLPEQAFYLVGNIDEATAKAINLEVESKSKK

Annotated regions:
phrase: RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: PAVDPLDST
type: ACTIVE_SITE
name: ATPase_a/bsu_AS
description: ATPase, alpha/beta subunit, nucleotide-binding domain, active site

phrase: RIVGEEHYETAQRVKQTSQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFKLILSGEL
type: DOMAIN
name: ATP-synt_VA_C
description: ATP synthase A/B type, C-terminal domain

phrase: IAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTVGQQINVTCEVQQLLGNNRVRAVAMSATDGLTRGMEVIDT
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_N
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain

phrase: GIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDST
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_nucl-bd
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain
Protein sequence:
MERPAILPSGQILSNIEVHSHRALFDIFKRFRSDDNNLYGAEFDALLGTYCSTLSLVRFLELGLSVACVCTKFPELSYVAEGTIQFEVQQPMIARDGPHPADQPVHNYMIKRLDRRSLNAAFSIAVEALGLISGENLDGTHISSAMRLRAIQQLARNVQAVLDSFERGTADQMLRVLMEKAPPLSLLAPFTLYEGRLADRVACAALVSELKRRVRDDTFFLTKHERNKDAVLDRLSDLVNCTAPSVAVARMTHADTQGRPVDGVLVTTAGVRQRLLHHVLTLADTHADVPVTYGEMVIANTNLVTALVMGKAVSNMDDVARYLLGGEPAPDDGKPVGSARVRADLVVVGDRLVFLEALEKRVYQATQVPYPLVGNLDVTFVMPLGVFKPAADRYARHAGSFAPTPGLPDPRTHPPRAVHFFNKDGVPCHVTFEHAMGTLCHPSFLDVDATLAALRQEPAEVQCAFGAYVADARPDALVGLMQRFLEEWPGMMPVRPRWAAPAAADQLLAPGNADLRLELHPAFDFFVAPEVDVPGPFAVPQVMGQVRAMPRIINGNIPLALCPVDFRDARGFELSVDRHRLAPATVAAVRGAFRDANYPMVFYIIEAVIHGSERTFCALARLVAQCIQSYWRNTHNAAFVNNFYMVMYINTYLGNGELPEDCAAVYKDLLEHVHALRRLIGEFTLPGDPLGNQPQEELNHALADATLLPPLIWDCDPILYRDGLAERLPELRVNGAHFQHILWVEMAQVNFRNVGGGLVHNRPVRNEN

Annotated regions:
Protein sequence:
MRYSDFTQRIAGDGAAAWDIHYRALARVEQGEEILLLSVGDPDFDTPAPIVQAAIDSLLAGNTHYADVRGKRALRQRIAERHRRRSGQAVDAEQVVVLAGAQCALYAVVQCLLNPGDEVIVAEPMYVTYEAVFGACGARVVPVPVRSENGFRVQAEEVAALITPRTRAMALNSPHNPSGASLPRATWEALAELCMAHDLWMISDEVYSELLFDGEHVSPASLPGMADRTATLNSLSKSHAMTGWRVGWVVGPAALCAHLENLALCMLYGSPEFIQDAACTALEAPLPELEAMREAYRRRRDLVIECLADSPGLRPLRPDGGMFVMVDIRPTGLSAQAFADRLLDRHGVSVLAGEAFGPSAAGHIRLGLVLGAEPLREACRRIALCAAELLGQA

Annotated regions:
phrase: EILLLSVGDPDFDTPAPIVQAAIDSLLAGNTHYADVRGKRALRQRIAERHRRRSGQAVDAEQVVVLAGAQCALYAVVQCLLNPGDEVIVAEPMYVTYEAVFGACGARVVPVPVRSENGFRVQAEEVAALITPRTRAMALNSPHNPSGASLPRATWEALAELCMAHDLWMISDEVYSELLFDGEHVSPASLPGMADRTATLNSLSKSHAMTGWRVGWVVGPAALCAHLENLALCMLYGSPEFIQDAACTALEAPLPELEAMREAYRRRRDLVIECLADSPGLRPLRPDGGMFVMVDIRPTGLSAQAFADRLLDRHGVSVLAGEAFGPSAAGHIRLGLVLGAEPLREACRR
type: DOMAIN
name: Aminotransferase_I/II_large
description: Aminotransferase, class I/classII, large domain

phrase: SLSKSHAMTGWRV
type: BINDING_SITE
name: NHTrfase_class1_PyrdxlP-BS
description: Aminotransferases, class-I, pyridoxal-phosphate-binding site
Protein sequence:
MNVFFMFSLLFLAALGSCADDRRRPLEECFREADYEEFLEIAKNGLQRTSNPKRVVVVGAGMAGLSAAYVLAGAGHQVTLLEASERVGGRVNTYRNEKDGWYVNLGPMRLPERHRIIREYIRKFGLELNEFIQENDNAWYFIKNIRKRVSEVKKDPGVFKYPVKPSEEGKSASQLYRESLQKVIEELKRTNCSYILNKYDTYSTKEYLIKEGNLSPGAVDMIGDLLNEDSSYYLSFIESLKSDDIFSYEKRFDEIVGGFDQLPRSMYQAIAEKVHLNAQVIKIQQNAEDVRVTYQTPAKTLSYVIADYVIVCSTSRAARRIHFEPPLPPKKAHALRSIHYRSSTKIFLTCSQKFWEADGIHGGKSTTDLPSRFIYYPNHSFTSGIGVIVAYTLADDTDFFQALDIETSADIVINDLSLIHQLPKEQIQALCYPSKIQKWSLDEYAMGAITSFTPYQFQDFFEIVAAPVGRIYFAGEYTASVHGWLDSTIKSGLTAARDVNLASQKPSRIQLSNDNEL

Annotated regions:
phrase: MAGLSAAYVLAGAGHQVTLLEASERVGGRVNTYRNEKDGWYVNLGPMRLPERHRIIREYIRKFGLELNEFIQENDNAWYFIKNIRKRVSEVKKDPGVFKYPVKPSEEGKSASQLYRESLQKVIEELKRTNCSYILNKYDTYSTKEYLIKEGNLSPGAVDMIGDLLNEDSSYYLSFIESLKSDDIFSYEKRFDEIVGGFDQLPRSMYQAIAEKVHLNAQVIKIQQNAEDVRVTYQTPAKTLSYVIADYVIVCSTSRAARRIHFEPPLPPKKAHALRSIHYRSSTKIFLTCSQKFWEADGIHGGKSTTDLPSRFIYYPNHSFTSGIGVIVAYTLADDTDFFQALDIETSADIVINDLSLIHQLPKEQIQALCYPSKIQKWSLDEYAMGAITSFTPYQFQDFFEIVAAPVGRIYFAGEYTASVHGWLDSTIKSGLTAARD
type: DOMAIN
name: Amino_oxidase
description: Amine oxidase
Protein sequence:
MTKYALVGDVGGTNARLALCDIASGEISQAKTYSGLDYPSLEAVIRVYLEEHKVEVKDGCIAIACPITGDWVAMTNHTWAFSIAEMKKNLGFSYLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTGLGVAHLVHVDKRWVSLPGEGGHVDFAPNSEEEGIILEILRAEIGHVSAERVLSGPGLVNLYRAIVKADNRLPENLKPKDITERALADSCTDCRRALSLFCVIMGRFGGNLALNLGTFGGVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYLIVHDNPGLLGSGAHLRQTLGHIL

Annotated regions:
Protein sequence:
MFYHLLYPHHDLWSVLNLFQYVTFRTIMAILTALLISFVLGPWLIRKLQSLQSSGQPIRKDGPERHIIEKAGTPTMGGTLILVAVLVATLLWAKLTNPFIWLTLAATFGFGAIGFWDDAEKLIHKNPKGVPGRTRFLLQTLIVLAIALALKFYVNPEVFGKLAFPVFKDLVIDLGIWFFPFAVIVIVGCGNAVNLTDGLDGLAIGPAMFTAAAFALISHAAGHYNFANYLGIPFIPGASELAIFCGAIVGAALGFLWFNTYPAQVFMGDVGALALGAALGSVALMTQHELVLAIIGGVFVIETLSVIIQVASFKLIGKRVFRMAPLHHHFELKGWAEPKIIVRFWIISIILALVGLATLKVR

Annotated regions:
phrase: KAGTPTMGGTLI
type: CONSERVED_SITE
name: PNAcMuramoyl-5peptid_Trfase_CS
description: Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site

phrase: NAVNLTDGLDG
type: CONSERVED_SITE
name: PNAcMuramoyl-5peptid_Trfase_CS
description: Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site
Protein sequence:
MQDIIGKIEDYSSKNGILLPDPVVEYVARIADEEKLKEPELQEMVRLFSRIAERNQGLDDDELLDAVEDDYQRILKVQELVKRKRARFPPKLIEDIAEVMKKHELSDDELDELIRRVRRAYDRARVEAGEAVGTVAAQSVGEPGTQMTMRTFHYAGVAELNVTLGLPRLIEIVDARKKISTPTMSIYFEGDLRYDEEFVRRKANKIGKSTLNDVLKNFSIQYADMSVVAELDEEKIQEKHLEYDEILAKVEKTFKKVEIDNNILRFEPPKPTIRELRLLADKVRKLQISGVKNIGKVVIRKEDDEWVIHTEGSNLGAVLKEEGVDKVRTTTNDIHEIETVLGIEAARNAIIHEAKRTMEEQGLTVDIRHIMLVADMMTADGSVKSIGRHGISGEKASVLARASFEETGKHLLRASIRGEVDHLTGIIENIIIGQPIPLGTGSVSVVMKERK

Annotated regions:
phrase: LSDDELDELIRRVRRAYDRARVEAGEAVGTVAAQSVGEPGTQMTMRTFHYAGVAELNVTLGLPRLIEIVDARKKISTPTMSIYFEGDLRYDEEFVRRKANKIGKSTLNDVLKNFSIQYADMSVVAELDEEKIQEKHLEYDEILAKVEKTFKKVEIDNNILRFEPPKPTIRELRLLADKVRKLQISGVKNIGKVVIRKEDDEWVIHTEGSNLGAVLKEEGVDKVRTTTNDIHEIETVLGIEAARNAIIHEAKRTMEEQGLTVDIRHIMLVADMMTADGSVKSIGRHGISGEKA
type: DOMAIN
name: RNA_pol_Rpb1_5
description: RNA polymerase Rpb1, domain 5
Protein sequence:
MGLTEGLFLILSGTQFALGILVNCFIGLVNGSSWFKTKRMSLSDFIITTLAFLRIILLCIILTDSFLIEFSPNAHDSGVIMQIIDVSWTFTNHLSIWLATCLGVLYCLKIASFSHPTFLWLKWRVSRVMVWMLLGVLLLSCGSTASLINEFKLYSVFRGIEATXNVTEHFRKKRSEYYLIHVLGTLWYLPPLIVSLAAYFLLIFSLGRHTRQMLQNGTSSRDPSTEAHKRAIRIILSSFFLFLLYFLAFLIASFGNFLPKTKMAKMIGEVMTMFYPAGHSFILILGNSKLKQTFVEMLRCESGHLKPGSKGPIFS

Annotated regions:
Protein sequence:
MTNINRLSMSTMFNALHEILNEEPLAIPPPPSRGGYSYFHIRTTEMDLQRMFNFMTGSEDLKDDISVLDTGMLMWMASFLTSDSDYFMVITRNKNGSKSLQKLMRMSDDMDVFFFVAIMRLFIHVMIDKYASYVAIQGMRIFKQDKRELMYDHILRYALFLARDQYGCIALNEIIKELDDPYYRDELMDIVSNNALLLSNDAYGNFVVQHVLKLHDSRCTGNIADKLCGYCVELSFKKYGSYIVERLLEVRDIPMATIVLDLLACKTEMLIRLARSENGNFVVCKLLELTNDILTADLFYSLVNKLRPYRFLLHRFPESKIVAILGSMRVPN

Annotated regions:
phrase: HILRYALFLARDQYGCIALNEIIKELDDPYYRDELM
type: REPEAT
name: Pumilio_RNA-bd_rpt
description: Pumilio RNA-binding repeat

phrase: KLCGYCVELSFKKYGSYIVERLLEVRDIPMATIVL
type: REPEAT
name: Pumilio_RNA-bd_rpt
description: Pumilio RNA-binding repeat

phrase: SDSDYFMVITRNKNGSKSLQKLMRMSDDMDVFFFV
type: REPEAT
name: Pumilio_RNA-bd_rpt
description: Pumilio RNA-binding repeat

phrase: CKTEMLIRLARSENGNFVVCKLLELTNDILTADLF
type: REPEAT
name: Pumilio_RNA-bd_rpt
description: Pumilio RNA-binding repeat

phrase: IVSNNALLLSNDAYGNFVVQHVLKLHDSRCTGNIA
type: REPEAT
name: Pumilio_RNA-bd_rpt
description: Pumilio RNA-binding repeat

phrase: MTNINRLSMSTMFNALHEILNEEPLAIPPPPSRGGYSYFHIRTTEMDLQRMFNFMTGSEDLKDDISVLDTGMLMWMASFLTSDSDYFMVITRNKNGSKSLQKLMRMSDDMDVFFFVAIMRLFIHVMIDKYASYVAIQGMRIFKQDKRELMYDHILRYALFLARDQYGCIALNEIIKELDDPYYRDELMDIVSNNALLLSNDAYGNFVVQHVLKLHDSRCTGNIADKLCGYCVELSFKKYGSYIVERLLEVRDIPMATIVLDLLACKTEMLIRLARSENGNFVVCKLLELTNDILTADLFYSLVNKLRPYRFLLHRFPESKIVAILGSMR
type: DOMAIN
name: PUM-HD
description: Pumilio homology domain

phrase: KLCGYCVELSFKKYGSYIVERLLEVRDIPMATIVL
type: REPEAT
name: Pumilio_RNA-bd_rpt
description: Pumilio RNA-binding repeat

phrase: LLLSNDAYGNFVVQHV
type: REPEAT
name: Pumilio_RNA-bd_rpt
description: Pumilio RNA-binding repeat

phrase: LARDQYGCIALNEIIKELDDPYYRDELM
type: REPEAT
name: Pumilio_RNA-bd_rpt
description: Pumilio RNA-binding repeat

phrase: YCVELSFKKYGSYIVERLLE
type: REPEAT
name: Pumilio_RNA-bd_rpt
description: Pumilio RNA-binding repeat

phrase: DIVSNNALLLSNDAYGNFVVQHVLKLHDSRCTGNIA
type: REPEAT
name: Pumilio_RNA-bd_rpt
description: Pumilio RNA-binding repeat
Protein sequence:
MRVRFGQYPNCGKRMVLEPGRLRPYSILRSFLDSEASAGLTLMFVAALALLLANSPFAPVYFDVLHRQVLGLTVLHWINDALMAVFFLLVGLEIKREFLDGQLATWSRRALPGIAALGGMVVPAVIFIAVNGGEPANLRGWAIPSATDIAFALGVLSLLGPRVPVSLKIFLTALAILDDLGAVLIIALFYTAELTPLMLILAAATLLGLAALNRFGVKPLAPYLVLGVVLWFFVLQSGIHATLAGVALALAIPLQASTGGGPTSPLHRLEHALNPWVAFLIVPVFGFANAGVSFAGLGLSALLDPVPLGVALGLFFGKQVGVFGFAWLAIWLKIADMPRYASWAHLYGVAVLCGIGFTMSLFIGLLAYPESAVLQDETKIGVLLGSTLAGLIGWLILRVTKAGFPERT

Annotated regions:
Protein sequence:
MFQAAERPQEWAMEGPRDGLKKERLLDDRHDSGLDSMKDEEYEQMVKELQEIRLEPQEVPRGSEPWKQQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESEFTEFTEDELPYDDCVFGGQRLTL

Annotated regions:
phrase: RGNTPLHLACEQGCLASVGVLTQSCTTPH
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: NGRTALHLAVDLQNPDLVSLLLKCGADVN
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: LQQTPLHLAVITNQPEIAEALLGAGCDPE
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: NGHTCLHLASIHGYLGIVELLVSLGADVN
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: DGDSFLHLAIIHEEKALTMEVIRQVKGDLA
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: LQQTPLHLAVITNQPEIAEALLGAGCDPELRD
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: NGHTCLHLASIHGYLGIVELLVSLGADVNAQE
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: NGRTALHLAVDLQNPDLVSLLLKCGADVNRVT
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: NYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVN
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: QNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHL
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: GNTPLHLACEQGCLA
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: IVELLVSLGADVNA
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat
Protein sequence:
MPAGLTEPAGAAPPAAVSASGTVTMAPAGALPVRVESTPVALGAVTKAPVSVCVEPTASQPLRSPVGTLVTKVAPVSAPPKVSSGPRLPAPQIVAVKAPNTTTIQFPANLQLPPGTVLIKSNSGPLMLVSPQQTVTRAETTSNITSRPAVPANPQTVKICTVPNSSSQLIKKVAVTPVKKLAQIGTTVVTTVPKPSSVQSVAVPTSVVTVTPGKPLNTVTTLKPSSLGASSTPSNEPNLKAENSAAVQINLSPTMLENVKKCKNFLAMLIKLACSGSQSPEMGQNVKKLVEQLLDAKIEAEEFTRKLYVELKSSPQPHLVPFLKKSVVALRQLLPNSQSFIQQCVQQTSSDMVIATCTTTVTTSPVVTTTVSSSQSEKSIIVSGATAPRTVSVQTLNPLAGPVGAKAGVVTLHSVGPTAATGGTTAGTGLLQTSKPLVTSVANTVTTVSLQPEKPVVSGTAVTLSLPAVTFGETSGAAICLPSVKPVVSSAGTTSDKPVIGTPVQIKLAQPGPVLSQPAGIPQAVQVKQLVVQQPSGGNEKQVTTISHSSTLTIQKCGQKTMPVNTIIPTSQFPPASILKQITLPGNKILSLQASPTQKNRIKENVTSCFRDEDDINDVTSMAGVNLNEENACILATNSELVGTLIQSCKDEPFLFIGALQKRILDIGKKHDITELNSDAVNLISQATQERLRGLLEKLTAIAQHRMTTYKASENYILCSDTRSQLKFLEKLDQLEKQRKDLEEREMLLKAAKSRSNKEDPEQLRLKQKAKELQQLELAQIQHRDANLTALAAIGPRKKRPLESGIEGLKDNLLASGTSSLTATKQLHRPRITRICLRDLIFCMEQEREMKYSRALYLALLK

Annotated regions:
phrase: NVKKCKNFLAMLIKLACSGSQSPEMGQNVKKLVEQLLDAKIEAEEFTRKLYVELKSSPQPHLVPFLKKSVVALRQLLPNSQSFIQQCVQQTS
type: DOMAIN
name: TAFH_NHR1
description: TAFH/NHR1

phrase: LENVKKCKNFLAMLIKLACSGSQSPEMGQNVKKLVEQLLDAKIEAEEFTRKLYVELKSSPQPHLVPFLKKSVVALRQLLPNSQSFIQQCVQQTSSDM
type: DOMAIN
name: TAFH_NHR1
description: TAFH/NHR1

phrase: INDVTSMAGVNLNEENACILATNSELVGTLIQSCKDEPFLFIGALQKRILDIGKKHDITELNSDAVNLISQATQERLRGLLEKLTAIAQHRMTTYKASENYILCSDTRSQLKFLEKLDQLEKQRKDLEEREMLLKAAKSRSNKEDPEQLRLKQKAKELQQLELAQIQHRDANLTALAAIGPRKKRPLESGIEGLKDNLLASGTSSLTATKQLHRPRITRICLRDLIFCMEQEREMKYSRAL
type: DOMAIN
name: TAF4_C
description: Transcription initiation factor TFIID component TAF4, C-terminal

phrase: NVKKCKNFLAMLIKLACSGSQSPEMGQNVKKLVEQLLDAKIEAEEFTRKLYVELKSSPQPHLVPFLKKSVVALRQLLPNSQSFIQQCVQQ
type: DOMAIN
name: TAFH_NHR1
description: TAFH/NHR1

phrase: DEPFLFIGALQKRILDIGKKHDITELNSDAVNLISQATQERLRGLLEKLTAIAQHRMTTYKASENYILCSDTRSQLKFLEKLDQLEKQRKDLEEREMLL
type: DOMAIN
name: TAF4_C
description: Transcription initiation factor TFIID component TAF4, C-terminal
Protein sequence:
MAVISMKELLEAGVHFGHQTRRWDPKMDEYIFTERNGIHIIDLQKTVKLVDEAYNFMRNASTDGANFLFVGTKKQASDAIAEEAARAGQYFINHRWLGGTLTNWNTIKTRIQRLKDLEAMAEDGTFEQLPKKEVVLLNKQREKLNKFLGGIKDMPGLPDVLFVVDPKKEEIAVKEANMLNIPVVAMIDTNANPEVVDVKIPANDDAIRAVRLITAKMADAIIEGRQGQDSAPEDAFVAGDENTESIEEIANIVEEGNN

Annotated regions:
phrase: PDVLFVVDPKKEEIAVKEANMLNI
type: CONSERVED_SITE
name: Ribosomal_uS2_CS
description: Small ribosomal subunit protein uS2, conserved site

phrase: MKELLEAGVHF
type: CONSERVED_SITE
name: Ribosomal_uS2_CS
description: Small ribosomal subunit protein uS2, conserved site
Protein sequence:
MSGGKGGKVGSAAKASQTRSAKAGLTFPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAIRNDDELNKLLGNVTIAQGGVLPNIHQNLLPKKSAKPSASQEL

Annotated regions:
phrase: AGLTFP
type: CONSERVED_SITE
name: Histone_H2A_CS
description: Histone H2A conserved site

phrase: AKASQTRSAKAGLTFPVGRVHRLLRRGNYAQRIGSGAPVYLTAVLEYLAAEILELAGNAARDNKKSRIIPRHLQLAI
type: DOMAIN
name: Histone_H2A/H2B/H3
description: Histone H2A/H2B/H3

phrase: DELNKLLGNVTIAQGGVLPNIHQNLLPKKSAKP
type: DOMAIN
name: Histone_H2A_C
description: Histone H2A, C-terminal domain
Protein sequence:
MKKIAVLTSGGDVPGMNAAIRAVVRKAAFHGINVVGIKHGYEGLVKGYLEELDLGSVGGIIQRGGTHLNSARCPEFKEDAVQQQGIENLRAAGIEGLVVIGGDGSYRGAMDLVKKGFPAVGVPGTIDNDVPGTEYTIGFDTALNTVVESIDKIRDTATSHENSFIVEVMGRDAGDIALWAGLAAGAETVLIPEEDYDLDDIVARLDRGAARGKKHSIIIVAEGVMSGNELAKLIKEKTGKETRVSVLGHIQRGGSPTARDRVLASQFGAHAVELLMEGKYGRAVGIRNHQVIDYDMPEAFEKNHEADVSLYTLMKELSI

Annotated regions:
phrase: RVSVLGHIQRGGSPTARD
type: CONSERVED_SITE
name: Phosphofructokinase_CS
description: Phosphofructokinase, conserved site

phrase: KIAVLTSGGDVPGMNAAIRAVVRKAAFHGINVVGIKHGYEGLVKGYLEELDLGSVGGIIQRGGTHLNSARCPEFKEDAVQQQGIENLRAAGIEGLVVIGGDGSYRGAMDLVKKGFPAVGVPGTIDNDVPGTEYTIGFDTALNTVVESIDKIRDTATSHENSFIVEVMGRDAGDIALWAGLAAGAETVLIPEEDYDLDDIVARLDRGAARGKKHSIIIVAEGVMSGNELAKLIKEKTGKETRVSVLGHIQRGGSPTARDRVLASQFGAHAVEL
type: DOMAIN
name: Phosphofructokinase_dom
description: Phosphofructokinase domain
Protein sequence:
MDSSLLSAATADTFNGNAADQIPPPLQPPGTDMTGISFRDQLWINSYPLDRNYIFDYFALSPFYDTTCNNEILRRRSIHPLDLSHLSKMTGLEYMLTDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRTIYNISKAFTDAASKLETIRQDLQVCLVAIVLSLSVNLGSYFLLIFKLMANGEQVYGFNKFLFDTENQNEPAESKPASETVDLKEMKRVDVILTSLYRKLAPPPPPPPFPEGYVSQEALGEKEELGTQGGESQPPQVDPIIDQGPAKRMKF

Annotated regions:
Protein sequence:
MKKKIKYNRILLKISGEFLSSKKTFNINTIFITKLIKQIKLLTNLGVQIGLVIGGGNLFRGSDLEKIGMRRSISDKIGMLSTVMNGLLLHEFMQTANIKSKIFSSTLLEGICERYHIDKAIKCLEKKSVAIFCFGLGIPFFTTDSAACIYGTEIKANILLKATKVDGVYSSDPILNKSAILYKNLSYKDILRKELKVMDYTSLILAYENKLPILVFNMYDPEILYKIIIEKSNIGTLIK

Annotated regions:
phrase: NRILLKISGEFLSSKKTFNINTIFITKLIKQIKLLTNLGVQIGLVIGGGNLFRGSDLEKIGMRRSISDKIGMLSTVMNGLLLHEFMQTANIKSKIFSSTLLEGICERYHIDKAIKCLEKKSVAIFCFGLGIPFFTTDSAACIYGTEIKANILLKATKVDGVYSSDPILNKSAILYKNLSYKDILRKELKVMDYTSLILAYENKLPILVF
type: DOMAIN
name: Asp/Glu/Uridylate_kinase
description: Aspartate/glutamate/uridylate kinase
Protein sequence:
MAAQLNELWQKTINIIKGELTEVSFNTWIKSITPISIDKDSIRLSVPNQFTKEILENRYKDLIINSMKIITTKKYDIAFLISSEEALETDEDQETDTNNVNTDTSSSMLNPKYKFDSFVIGNSNRFAHAACLAVAEAPAKAYNPLFIYGGVGLGKTHLMQAIGHYILDNNPKAKVVYVSSEKFTNELINSIKDDKNVEFRNKYRNVDVLLIDDVQFIAGKERTQEEFFHTFNALHENNKQIILSSDRPPKEIPTLEDRLRSRFEWGLIADIQAPDFETRIAILKKKADVEHLNIPNDVMVYIATQIKSNIRELEGALIRIVAFSSLTNKEISVDLASEALKDIISSKQNKQITIDLIQDVVSSYFNLRIEDFKSARRTKNIAFPRQIAMYLSRKLTDMSLPKIGEAFGGRDHTTVIHAYEKISSALKEDDDLKYTINEITKRFSPK

Annotated regions:
phrase: AYNPLFIYGGVGLGKTHLMQAIGHYILDNNPKAKVVYVSSEKFTNELINSIKDDKNVEFRNKYRNVDVLLIDDVQFIAGKERTQEEFFHTFNALHENNKQIILSSDRPPKEIPTLEDRLRSRFEWGLI
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: IDLIQDVVSSYFNLRIEDFKSARRTKNIAFPRQIAMYLSRKLTDMSLPKIGEAFGGRDHTTVIHAYEK
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: IDLIQDVVSSYFNLRIEDFKSARRTKNIAFPRQIAMYLSRKLTDMSLPKIGEAFGGRDHTTVIHAYEKISSALKEDDDLKYTINEITKR
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: IGEAFGGRDHTTVIHAYEK
type: CONSERVED_SITE
name: Chromosome_initiator_DnaA_CS
description: Chromosomal replication control, initiator DnaA, conserved site

phrase: LNPKYKFDSFVIGNSNRFAHAACLAVAEAPAKAYNPLFIYGGVGLGKTHLMQAIGHYILDNNPKAKVVYVSSEKFTNELINSIKDDKNVEFRNKYRNVDVLLIDDVQFIAGKERTQEEFFHTFNALHENNKQIILSSDRPPKEIPTLEDRLRSRFEWGLI
type: DOMAIN
name: DnaA_dom
description: Chromosomal replication initiator protein DnaA, ATPAse domain

phrase: NELWQKTINIIKGELTEVSFNTWIKSITPISIDKDSIRLSVPNQFTKEILENRYKDLII
type: DOMAIN
name: DnaA_N_dom
description: DnaA N-terminal domain

phrase: TIDLIQDVVSSYFNLRIEDFKSARRTKNIAFPRQIAMYLSRKLTDMSLPKIGEAFGGRDHTTVIHAYEK
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal
Protein sequence:
MKRPSGRVADQLRSIRITRNYTKHAEGSVLVEFGDTKVICTVSVENGVPRFLKGQGQGWLTAEYGMLPRSTGERNQREASRGKQGGRTLEIQRLIGRSLRAALDMSKLGDITLYVDCDVIQADGGTRTASITGAMVALCDALAVIKKRGGLKGGNPLKHMIAAVSVGMYQGEAVLDLDYLEDSAAETDLNVVMTSAGGFIEVQGTAEGAPFQPEDFNAMLALAQKGMNEIFELQQAALAD

Annotated regions:
phrase: CDVIQADGGTRT
type: CONSERVED_SITE
name: RNase_PH_CS
description: Ribonuclease PH, conserved site

phrase: QLRSIRITRNYTKHAEGSVLVEFGDTKVICTVSVENGVPRFLKGQGQGWLTAEYGMLPRSTGERNQREASRGKQGGRTLEIQRLIGRSLRAALDMSKLGDITLYVDCDVIQADGGTRTASITGAMVALCD
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1

phrase: HMIAAVSVGMYQGEAVLDLDYLEDSAAETDLNVVMTSAGGFIEVQGTAEGAPFQPEDFNAMLALAQK
type: DOMAIN
name: ExoRNase_PH_dom2
description: Exoribonuclease, phosphorolytic domain 2