nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MALPDFSMRQLLEAGVHFGHQTHRWNPKMKPYIFGDRNNIHIIDLAQTVPMLSRALQVVSDTVARGGRVLFVGTKRQASEIIADSAKRSAQYYVNSRWLGGMMTNWKTISNSIQRLRKLDEILGGEAQGFTKKERLNLEREREKLDKALGGIRDMGGTPDLMFIIDTNKEKIAIDEAKRLGIPVVAIIDSNCDPDLIDYPIPGNDDASRAIALYCELISRAAIDGIARQQSSSGRDLGASSEVPVEPALEEAAEG

Annotated regions:
phrase: MRQLLEAGVHF
type: CONSERVED_SITE
name: Ribosomal_uS2_CS
description: Small ribosomal subunit protein uS2, conserved site

phrase: PDLMFIIDTNKEKIAIDEAKRLGI
type: CONSERVED_SITE
name: Ribosomal_uS2_CS
description: Small ribosomal subunit protein uS2, conserved site
Protein sequence:
MSAPCHCSAPKANIPALDDKYLSDDPAHPANLICELCRLFYDNNWVTGTGGGISIRDVKGENPNLVYIAPSGIQKERLQPWEMFVVDLNGEKLLRTPNECPQELTKSYKYKPSACTPLFMSCYTMREAGACIHTHSQSAVMCTLLWGDKVEFEISHIEQIKALPQLKLNESTSKIEKVGSMQYYDKLVIPIIENTPHEEDLTDSLQEAIRNYPGTTAVLVRRHGIYVWGEDVWKAKVYNEALDYLLELAVKMKTAGMDTVRK

Annotated regions:
phrase: LICELCRLFYDNNWVTGTGGGISIRDVKGENPNLVYIAPSGIQKERLQPWEMFVVDLNGEKLLRTPNECPQELTKSYKYKPSACTPLFMSCYTMREAGACIHTHSQSAVMCTLLWGDKVEFEISHIEQIKALPQLKLNESTSKIEKVGSMQYYDKLVIPIIENTPHEEDLTDSLQEAIRNYPGTTAVLVRRHGIYVWGEDVWKAKVYNEALDYLLEL
type: DOMAIN
name: Aldolase_II/adducin_N
description: Class II aldolase/adducin N-terminal

phrase: NLICELCRLFYDNNWVTGTGGGISIRDVKGENPNLVYIAPSGIQKERLQPWEMFVVDLNGEKLLRTPNECPQELTKSYKYKPSACTPLFMSCYTMREAGACIHTHSQSAVMCTLLWGDKVEFEISHIEQIKALPQLKLNESTSKIEKVGSMQYYDKLVIPIIENTPHEEDLTDSLQEAIRNYPGTTAVLVRRHGIYVWGEDVWKAKVYNEALDYLLELA
type: DOMAIN
name: Aldolase_II/adducin_N
description: Class II aldolase/adducin N-terminal
Protein sequence:
MAFPPNSWRPTGPLPTSSLSLRWRVMMLAMSMVALVVVLMAVAVYAVVSRALYDDLDNQLHSRARLLIESGSLAADPGKAIEGTAYSDVNAMLVIPGRSIYTANQQGQTLPLGEPEKDVISGELLMSLRTANHQRVLAVHLANGSSLLISKSLAPTVQVLRRLGTVLLIVGGIGVAVAAIAGGAVARAGLRPVGRLTEAAERVARTDDLRPIPVVGSDELARLTEAFNMMLRALAESRERQARLVSDAGHELRTPLTSLRTNVELLMAAQEPGAPPLPEDEMAGLRADVIAQIEELSTLVGDLVDLTREDAGGITPEPVDMADVIDRSLERVRRRRNDIEFDVDVIGWQVFGDAQGLGRAVLNLLDNAAKWSPPGGRVGVRLHQVDHMHAEIVVSDQGPGIPPEERRLVFERFYRSDAARAMPGSGLGLAIVQQVVLKHGGALRIDETVPGGNPPGASVHMLLPGQRIPDPGATRSAEGFVDDRGGHTVATE

Annotated regions:
phrase: AEIVVSDQGPGIPP
type: DOMAIN
name: Sig_transdc_His_kin-like_C
description: Signal transduction histidine kinase-related protein, C-terminal

phrase: LVFERFYRSD
type: DOMAIN
name: Sig_transdc_His_kin-like_C
description: Signal transduction histidine kinase-related protein, C-terminal

phrase: PGSGLGLAIVQQVVLKHG
type: DOMAIN
name: Sig_transdc_His_kin-like_C
description: Signal transduction histidine kinase-related protein, C-terminal

phrase: RAGLRPVGRLTEAAERVARTDDLRPIPVVGSDELARLTEAFNMMLRALAESR
type: DOMAIN
name: HAMP_dom
description: HAMP domain

phrase: DAGHELRTPLTSLRTNVELLMAAQEPGAPPLPEDEMAGLRADVIAQIEELSTLVGDLVDLTREDAGGITPEPVDMADVIDRSLERVRRRRNDIEFDVDVIGWQVFGDAQGLGRAVLNLLDNAAKWSPPGGRVGVRLHQVDHMHAEIVVSDQGPGIPPEERRLVFERFYRSDAARAMPGSGLGLAIVQQVVLKHGGALRIDETVPGGNPPGASVHMLLPGQ
type: DOMAIN
name: His_kinase_dom
description: Histidine kinase domain

phrase: RQARLVSDAGHELRTPLTSLRTNVELLMAAQEPGAPPLPEDEMAGLRADVIAQIEELSTLVGDLVDLTREDA
type: DOMAIN
name: HisK_dim/P_dom
description: Signal transduction histidine kinase, dimerisation/phosphoacceptor domain

phrase: GDAQGLGRAVLNLLDNAAKWSPPGGRVGVRLHQVDHMHAEIVVSDQGPGIPPEERRLVFERFYRSDAARAMPGSGLGLAIVQQVVLKHGGALRIDETVPGGNPPGASVHMLL
type: DOMAIN
name: HATPase_dom
description: Histidine kinase/HSP90-like ATPase domain

phrase: VARAGLRPVGRLTEAAERVARTDDLRPIPVVGSDELARLTEAFNMMLRAL
type: DOMAIN
name: HAMP_dom
description: HAMP domain

phrase: QARLVSDAGHELRTPLTSLRTNVELLMAAQEPGAPPLPEDEMAGLRADVIAQIEELSTLVGDLVDLTREDA
type: DOMAIN
name: HisK_dim/P_dom
description: Signal transduction histidine kinase, dimerisation/phosphoacceptor domain

phrase: ERQARLVSDAGHELRTPLTSLRTNVELLMAAQEPGAPPLPEDEMAGLRADVIAQIEELSTLVGDLVDLT
type: DOMAIN
name: HisK_dim/P_dom
description: Signal transduction histidine kinase, dimerisation/phosphoacceptor domain

phrase: RAGLRPVGRLTEAAERVARTDDLRPIPVVGSDELARLTEAFNMMLRALAESR
type: DOMAIN
name: HAMP_dom
description: HAMP domain

phrase: GDAQGLGRAVLNLLDNAAKWSPPGGRVGVRLHQVDHMHAEIVVSDQGPGIPPEERRLVFERFYRSDAARAMPGSGLGLAIVQQVVLKHGGALRIDETVPGGNPPGASVHMLLPGQ
type: DOMAIN
name: HATPase_dom
description: Histidine kinase/HSP90-like ATPase domain
Protein sequence:
MPIITLPDGTKKIFEQVVSVEQVAKSMGLVKAALAGEVDGELVSTSFLIKTDANLTIITANDDQGLEIIRHSTAHLLAQATQMLYPDAQVTIGPVIDNGFYYDFAYKNGFLEGDLIKIEKNMHKLVKQNLKIEKFEMSRDETLQFFKDKGEYYKVKIIESISTDQILSLYKQGDFIDLCRGPHVPSTAKLKNFKLMKLAGAYWRGDSSNEMLQRVYGTAWGNEQDLKVYLHKLEEVARRDHRKIGKTQDLFHIQEETPGMVFWHAKGWILYQLVEQYMRGIFRDNGYQEVHTPQLIDKSLWEKSGHWDKFGDVMFTTTSGDRDYAVKPMNCPAHIQIYNQGLKSYRNLPLRLAEFGSCHRNEPSGTLHGIMRVRNFVQDDGHIFCTPEQIQDEVSTFIDLTFNVYKYFGFEKINIKLSTRPKKRVGSDEVWDKSEIALVEALNAKNIVWELQEGEGAFYGPKIEFILKDCLDRQWQCGTLQVDFSMPKRLGAQFIDENSVKKTPVILHRAIMGSLERFLGILIEHYEGAYPCWLSPIQAVIINISEKHAKFIVDIVKKLKKQGLRVISDLRNEKVSFKIREHSLQRYPYILVVGDREMEKGQVSVRQRGGKDLGAMSVGTFIKKVNQETLLKNQIK

Annotated regions:
phrase: RDHRKIGKTQDLFHIQEETPGMVFWHAKGWILYQLVEQYMRGIFRDNGYQEVHTPQLIDKSLWEKSGHWDKFGDVMFTTTSGDRDYAVKPMNCPAHIQIYNQGLKSYRNLPLRLAEFGSCHRNEPSGTLHGIMRVRNFVQDDGHIFCTPEQIQDEVSTFIDLTFNVYKYFGFEKINIKLSTRPKKRVGSDEVWDKSEIALVEALNAKNIVWELQEGEGAFYGPKIEFILKDCLDRQWQCGTLQVDFSMPKRLGAQFIDENSVKKTPVILHRAIMGSLERFLGILIEHYEGAYPCWLS
type: DOMAIN
name: ThrRS_core
description: Threonine-tRNA ligase catalytic core domain

phrase: QAVIINISEKHAKFIVDIVKKLKKQGLRVISDLRNEKVSFKIREHSLQRYPYILVVGDREMEKGQVSVRQRGGKDLGAMSVGTFIKKVN
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: GDRDYAVKPMNCPAHIQIYNQGLKSYRNLPLRLAEFGSCHRNEPSGTLHGIMRVRNFVQDDGHIFCTPEQIQDEVSTFIDLTFNVYKYFGFEKINIKLSTRPKKRVGSDEVWDKSEIALVEALNAKNIVWELQEGEGAFYGPKIEFILKDCLDRQWQCGTLQVDFSMPKRLGAQFIDENSVKKTPVILHRAIMGSLERFLGILIEH
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: PIQAVIINISEKHAKFIVDIVKKLKKQGLRVISDLRNEKVSFKIREHSLQRYPYILVVGDREMEKGQVSVRQRGGKDLGAMSVGTFIKK
type: DOMAIN
name: ThrRS_anticodon
description: Threonine-tRNA ligase, class IIa, anticodon-binding domain

phrase: LSLYKQGDFIDLCRGPHVPSTAKLKNFKLMKLAGAYWRGDSSNEMLQRV
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD

phrase: SLYKQGDFIDLCRGPHVPSTAKLKNFKLMKLAGAYWRGDSSNEMLQRV
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD

phrase: DHRKIGKTQDLFHIQEETPGMVFWHAKGWILYQLVEQYMRGIFRDNGYQEVHTPQLIDKSLWEKSGHWDKFGDVMFTTTSGDRDYAVKPMNCPAHIQIYNQGLKSYRNLPLRLAEFGSCHRNEPSGTLHGIMRVRNFVQDDGHIFCTPEQIQDEVSTFIDLTFNVYKYFGFEKINIKLSTRPKKRVGSDEVWDKSEIALVEALNAKNIVWELQEGEGAFYGPKIEFILKDCLDRQWQCGTLQVDFSMPKRLGAQFIDENSVKKTPVILHRAIMGSLERFLGILIEHYEGAY
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: MPIITLPDGTKKIFEQVVSVEQVAKSMGLVKAALAGEVDGELVSTSFLIKTDANLTII
type: DOMAIN
name: TGS
description: TGS
Protein sequence:
MSGASSGTAIGAHLFGVSPEYRVLIGDGGAGPSKSLSEVSFSVWYRSRAARLVILCLVASFLVPCLTFLIAEAVMGQTVTTPLSLTLDHWSEVRARAHNQGVEVRKKKWITLCEAEWVMMNVGWPREGTFSLDNISQVEKKIFAPGPHGHPDQVPYITTWRSLATDPPSWVRPFLPPPKPPTPLPQPLSPQPSAPLTSSLYPVVPKPDPPKPPVLPPDPSSPLIDLLTEEPPPYPGGHGPPPSGPRTPAASPIASRLRERRENPAEESQALPLREGPNNRPQYWPFSASDLYNWKSHNPPFSQDPVALTNLIESILVTHQPTWDDCQQLLQALLTGEERQRVLLEARKQVPGEDGRPTQLPNVIDETFPLTRPNWDFATPAGREHLRLYRQLLLAGLRGAARRPTNLAQVKQVVQGKEETPAAFLERLKEAYRMYTPYDPEDPGQAASVILSFIYQSSPDIRNKLQRLEGLQGFTLSDLLKEAEKIYNKRETPEEREERLWQRQEERDKKRHKEMTKVLATVVAQNRDKDREENKLGDQRKIPLGKDQCAYCKEKGHWVRDCPKRPRKKPANSTLLNLED

Annotated regions:
phrase: GQTVTTPLSLTLDHWSEVRARAHNQGVEVRKKKWITLCEAEWVMMNVGWPREGTFSLDNISQVEKKIFAPGPHGHPDQVPYITTWRSLATDPPSWVRPFLPPPKPPTPLPQ
type: DOMAIN
name: G_retro_matrix
description: Gamma-retroviral matrix protein

phrase: QCAYCKEKGHWVRDCP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: QCAYCKEKGHWVRDCP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: CAYCKEKGHWVRDCP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: SDLYNWKSHNPPFSQDPVALTNLIESILVTHQPTWDDCQQLLQALLTGEERQRVLLEARKQVPGEDGRPTQLPNVIDETFPLTRPNWDFATPAGREHLRLYRQLLLAGLRGAARRPTNLAQVKQVVQGKEETPAAFLERLKEAYRMYTPYDPEDPGQAASVILSFIYQSSPDIRNKLQRLEGLQGFTLSDLLKEAEKIYN
type: DOMAIN
name: Gag_P30
description: Core shell protein Gag P30
Protein sequence:
MSRVSQARNLGKYFLLIDNMLVVLGFFVVFPLISIRFVDQMGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMGIAHEPWLLWFSCFLSGLGGTLFDPPRSALVVKLIRPEQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCAMGAILFIVCAIFNAWLLPAWKLSTVRTPVREGMRRVISDKRFVTYVLTLAGYYMLAVQVMLMLPIMVNDVAGSPAAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMIPIGLAGNLQQLFTLICAFYIGSVIAEPARETLSASLTDARARGSYMGFSRLGLAIGGAIGYIGGGWLFDMGKTLAQPELPWMMLGIIGFITFLALGWQFSHKRTPRQYTGARRLI

Annotated regions:
phrase: VSQARNLGKYFLLIDNMLVVLGFFVVFPLISIRFVDQMGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMGIAHEPWLLWFSCFLSGLGGTLFDPPRSALVVKLIRPEQRGRFFSLLMMQDSAGAVIGALLGSWLLQYDFRLVCAMGAILFIVCAIFNAWLLPAWKLSTVRTPVREGMRRVISDKRFVTYVLTLAGYYMLAVQVMLMLPIMVNDVAGSPAAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMIPIGLAGNLQQLFTLICAFYIGSVIAEPARETLSASLTDARARGSYMGFSRLGLAIGGAIGYIGGGWLFDMGKTLAQPELPWMMLGIIGFITFLALGWQFSHK
type: DOMAIN
name: MFS_dom
description: Major facilitator superfamily domain
Protein sequence:
MSLIVVFDESGKALEVIKDYESIKERLASIGVRFERWETNRELPWSATQEEVLQAYKEEVDRIVKEFDFKSIDVVSLTPDHPKREELRNMFLSEHTHSDFEVRFFVDGSGTFYLHPDDKVYVVLCEKGDFISVPANTRHWFDMGTRPFFKAIRFFSIPEGWVAQFTGSDISKRIPSHDEIVEHYL

Annotated regions:
Protein sequence:
MTKFIFVTGGVVSGLGKGITAASLGRLLKNRGLKIVAQKLDPYINVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFIDENLNKYSNLTTGKVYWNVLMKERNGEYLGETVQVIPHITNEIKDFVYSVGEKSNADIAIVEIGGTTGDIESQPFLEAIRQIYQEVGRNNCIFIHVTLIPYISSSGEFKSKPTQHSVKELQSFGITPHIIVARSDEAIDENTKQKIALFCNVKPDCVIENNNTDVLYKVPIMLEENGLSKVVCRELGIKYDECNLAEWNNMIDRIDNREKSIKISLVGKYTKLHDAYLSVVEALNHAGYENKSNIEINWIDSEYVNDITVDELLKDSDGILVPGGFGDRGIEGMIRTARYARENNIPYLGICLGMQIAVIEFARNVLKLHEANSSEFVYYGKYPVIDLMHDQYGNLQKGGTMRLGAYPCKIKENTQLFKSYKTSEILERHRHRYEFNNKYRAIFENSGMIICGTSPDDKLVEAVEVENNDFYVGVQYNPEFKSRPNRANPIIKQFIKVSLENKERNIEVELNSLSYQNIF

Annotated regions:
phrase: LHDAYLSVVEALNHAGYENKSNIEINWIDSEYVNDITVDELLKDSDGILVPGGFGDRGIEGMIRTARYARENNIPYLGICLGMQIAVIEFARNVLKLHEANSSEFVYYGKYPVIDLMHDQYGNLQKGGTMRLGAYPCKIKENTQLFKSYKTSEILERHRHRYEFNNKYRAIFENSGMIICGTSPDDKLVEAVEVENNDFYVGVQYNPEFKSRPNRANPIIKQFI
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: KFIFVTGGVVSGLGKGITAASLGRLLKNRGLKIVAQKLDPYINVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFIDENLNKYSNLTTGKVYWNVLMKERNGEYLGETVQVIPHITNEIKDFVYSVGEKSNADIAIVEIGGTTGDIESQPFLEAIRQIYQEVGRNNCIFIHVTLIPYISSSGEFKSKPTQHSVKELQSFGITPHIIVARSDEAIDENTKQKIALFCNVKPDCVIENNNTDVLYKVPIMLEENGLSKVVC
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: IKISLVGKYTKLHDAYLSVVEALNHAGYENKSNIEINWIDSEYVNDITVDELLKDSDGILVPGGFGDRGIEGMIRTARYARENNIPYLGICLGMQIAVIEFARNVLKLHEANSSEFVYYGKYPVIDLMHDQYGNLQKGGTMRLGAYPCKIKENTQLFKSYKTSEILERHRHRYEFNNKYRAIFENSGMIICGTSPDDKLVEAVEVENNDFYVGVQYNPEFKSRPNRANPIIKQF
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain

phrase: KFIFVTGGVVSGLGKGITAASLGRLLKNRGLKIVAQKLDPYINVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFIDENLNKYSNLTTGKVYWNVLMKERNGEYLGETVQVIPHITNEIKDFVYSVGEKSNADIAIVEIGGTTGDIESQPFLEAIRQIYQEVGRNNCIFIHVTLIPYISSSGEFKSKPTQHSVKELQSFGITPHIIVARSDEAIDENTKQKIALFCNVKPDCVIENNNTDVLYKVPIMLEENGLSKVVCREL
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal
Protein sequence:
MGKPFFTLSLSSLCLLLLSSACFAITSSKFNECQLNNLNALEPDHRVESEGGLIETWNSQHPELQCAGVTVSKRTLNRNGSHLPSYLPYPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSRSQQQLQDSHQKIRHFNEGDVLVIPLGVPYWTYNTGDEPVVAISPLDTSNFNNQLDQNPRVFYLAGNPDIEHPETMQQQQQQKSHGGRKQGQHRQQEEEGGSVLSGFSKHFLAQSFNTNEDTAEKLRSPDDERKQIVTVEGGLSVISPKWQEQEDEDEDEDEEYGRTPSYPPRRPSHGKHEDDEDEDEEEDQPRPDHPPQRPSRPEQQEPRGRGCQTRNGVEENICTMKLHENIARPSRADFYNPKAGRISTLNSLTLPALRQFGLSAQYVVLYRNGIYSPDWNLNANSVTMTRGKGRVRVVNCQGNAVFDGELRRGQLLVVPQNPAVAEQGGEQGLEYVVFKTHHNAVSSYIKDVFRVIPSEVLSNSYNLGQSQVRQLKYQGNSGPLVNP

Annotated regions:
phrase: NIARPSRADFYNPKAGRISTLNSLTLPALRQFGLSAQYVVLYRNGIYSPDWNLNANSVTMTRGKGRVRVVNCQGNAVFDGELRRGQLLVVPQNPAVAEQGGEQGLEYVVFKTHHNAVSSYIKDVFRVIPSEVLSNSYNLGQSQ
type: DOMAIN
name: Cupin_1
description: Cupin 1

phrase: LNALEPDHRVESEGGLIETWNSQHPELQCAGVTVSKRTLNRNGSHLPSYLPYPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSRSQQQLQDSHQKIRHFNEGDVLVIPLGVPYWTYNTGDEPVVAISPLDTSNFNNQLDQNPRVFYLAGN
type: DOMAIN
name: Cupin_1
description: Cupin 1

phrase: NGVEENICTMKLHENIARPSRA
type: CONSERVED_SITE
name: 11S_seedstore_CS
description: 11-S seed storage protein, conserved site

phrase: LNALEPDHRVESEGGLIETWNSQHPELQCAGVTVSKRTLNRNGSHLPSYLPYPQMIIVVQGKGAIGFAFPGCPETFEKPQQQSSRRGSRSQQQLQDSHQKIRHFNEGDVLVIPLGVPYWTYNTGDEPVVAISPLDTSNFNNQLDQNPRVFYLAGNPDIEHPETMQQQQQQKSHGGRKQGQHRQQEEEGGSVLSGFSKHFLAQSFNTNEDTA
type: DOMAIN
name: Cupin_1
description: Cupin 1

phrase: ENIARPSRADFYNPKAGRISTLNSLTLPALRQFGLSAQYVVLYRNGIYSPDWNLNANSVTMTRGKGRVRVVNCQGNAVFDGELRRGQLLVVPQNPAVAEQGGEQGLEYVVFKTHHNAVSSYIKDVFRVIPSEVLSNSYNLGQSQV
type: DOMAIN
name: Cupin_1
description: Cupin 1
Protein sequence:
MHHTTKKKYGQNFLTDVNLLNKIVTKASITDKNVLEIGPGKGALTKIIVPQAKHVLAYEIDATLKPFLNFENHNNVNIIYDDFLKRDLLKDFDHYFSPNSQLSLIGNLPYYITSPILFKIIDTPQINDATIMIQKEVGMRLLAQPNNKNYNALSVIIQFLFSIEKIQEVKRHMFFPAPKVDSIVIKLTKNNNICPTFLQQFIKFVKASFKQKRKTLLNNLSCQFLLSKETIIPFFLQHHIPLQIRAEQVTLETFQKLTVKWFIFFNIS

Annotated regions:
phrase: VLEIGPGKGALTKIIVPQAKHVLAYEI
type: CONSERVED_SITE
name: rRNA_Ade_Mease_Trfase_CS
description: Ribosomal RNA adenine methylase transferase, conserved site

phrase: LLNKIVTKASITDKNVLEIGPGKGALTKIIVPQAKHVLAYEIDATLKPFLNFENHNNVNIIYDDFLKRDLLKDFDHYFSPNSQLSLIGNLPYYITSPILFKIIDTPQINDATIMIQKEVGMRLLAQPNNKNYNALSVIIQFLFSIEKIQEVKRHMFFPAPKVDSIVIKLTKN
type: DOMAIN
name: rRNA_Ade_methylase_Trfase_N
description: Ribosomal RNA adenine methylase transferase, N-terminal
Protein sequence:
MKHVLDLSRGVNASASSVKSLAGLSIPALKAEMETLGLDPKKAGMRAKQLRRWIHHFGVQDFGGMTDIAKELRADLAEKYVLTRPEITEHKVSVDGTQKWLTKFQEGVEGESVYIPDVGRSGALCVSSQVGCTLNCTFCHTGTQKLVRNLTAQEIVNQVLIARDELEEWPSSNENRKLTNIVFMGMGEPLYNLDNVAEAIDTISDGDGIALGRRRITVSTAGVAPKIPELGERTGAMLAISLHAVRDDLRNEIVPINKKYDLQTLFEAIRAYPDLGNSKRVTFEYVMLKGVNDSPAEARDLVKLLKGVPAKINLIPFNPWPGSPYECSDWETIETFAEIVNRAGYASPIRTPRGRDIFAACGQLRSESVKKSAAEKRREAMAAQD

Annotated regions:
phrase: SSQVGCTLNCTFCHTGTQKLVRNLTAQEIVNQVLIARDELEEWPSSNENRKLTNIVFMGMGEPLYNLDNVAEAIDTISDGDGIALGRRRITVSTAGVAPKIPELGERTGAMLAISLHAVRDDLRNEIVPINKKYDLQTLFEAIRAYPDLGNSKRVTFEYVMLKGVNDSPA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SVKSLAGLSIPALKAEMETLGLDPKKAGMRAKQLRRWIHHFGVQDFGGMTDIAKELRADLAEKYVLTRPEITEHKVSVDGTQKWLTKFQEGVEGESVYIPDVGRSGALCVSSQVGCTLNCTFCHTGTQKLVRNLTAQEIVNQVLIARDELEEWPSSNENRKLTNIVFMGMGEPLYNLDNVAEAIDTISDGDGIALGRRRITVSTAGVAPKIPELGERTGAMLAISLHAVRDDLRNEIVPINKKYDLQTLFEAIRAYPDLGNSKRVTFEYVMLKGVNDSPAEARDLVKLLKGVPAKINLIPFNPWPGSPYECSDWETIETFAEIVNRAGYASPIRTPRGRDIFAACGQLRSESVKKSAAE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VGRSGALCVSSQVGCTLNCTFCHTGTQKLVRNLTAQEIVNQVLIARDELEEWPSSNENRKLTNIVFMGMGEPLYNLDNVAEAIDTISDGDGIALGRRRITVSTAGVAPKIPELGERTGAMLAISLHAVRDDLRNEIVPINKKYDLQTLFEAIRAYPDLGNSKRVTFEYVMLKGVNDSPAEARDLVKLLKGVPAKINLIPFNPWPGSPYECSDWETIETFAEIVNRAGYASPI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: GMRAKQLRRWIHHFGVQDFGGMTDIAKELRADLAEK
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MATPEKAAAVAELTDKFRSSNAAVLTEYRGLTVAQLKTLRRSLGENAQYAVVKNTLTKIAANEAGITLDDQLFAGPTAVAFVTGDPVESAKGLRDFAKDNPNLVIKGGVLDGKAMSADEIKKLADLESREVLLSKLAGAFKGKQSQTAQLFQALPSKLVRTVDALRAKQDEQGGAE

Annotated regions:
phrase: KAAAVAELTDKFRSSNAAVLTEYRGLTVAQLKTL
type: CONSERVED_SITE
name: Ribosomal_uL10_CS_bac
description: Large ribosomal subunit protein uL10, conserved site, bacteria
Protein sequence:
MAYTQSKSQKVGYQAGVKDYRLTYYTPDYTPKDTDILAAFRVTPQPGVPFEEAAAAVAAESSTGTWTTVWTDLLTDLDRYKGRCYDIEPLPGEDNQFIAYIAYPLDLFEEGSVTNMLTSIVGNVFGFKALKALRLEDLRIPVAYLKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENINSQPFQRWRDRFLFVADAIHKAQAETGEIKGHYLNVTAPTCEEMLKRAEFAKDWNAIIMHDFLTAGFTANTTLSKGCRDNGMLLHIHRAMHAVMDRQKNHGIHFRVLAKCLRMSGGDHIHTGTVVGKLEGDKAVTLGFVDLLRENYIEQDRSRGIYFTQDWASMPGVMAVASGGIHVWHMPALVDIFGDDAVLQFGGGTLGHPWGNAPGATANRVALEACIQARNEGRDLMREGGDIIREAARWSPELAAACELWKEIKFEFEAQDTI

Annotated regions:
phrase: YYTPDYTPKDTDILAAFRVTPQPGVPFEEAAAAVAAESSTGTWTTVWTDLLTDLDRYKGRCYDIEPLPGEDNQFIAYIAYPLDLFEEGSVTNMLTSIVGNVFGFKALKALRLEDLRIPVA
type: DOMAIN
name: RuBisCO_lsu_fd_N
description: Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal

phrase: GLDFTKDD
type: ACTIVE_SITE
name: RuBisCo_large_chain_AS
description: Ribulose bisphosphate carboxylase, large chain, active site

phrase: GIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENINSQPFQRWRDRFLFVADAIHKAQAETGEIKGHYLNVTAPTCEEMLKRAEFAKDWNAIIMHDFLTAGFTANTTLSKGCRDNGMLLHIHRAMHAVMDRQKNHGIHFRVLAKCLRMSGGDHIHTGTVVGKLEGDKAVTLGFVDLLRENYIEQDRSRGIYFTQDWASMPGVMAVASGGIHVWHMPALVDIFGDDAVLQFGGGTLGHPWGNAPGATANRVALEACIQARNEGRDLMREGGDIIREAARWSPELAAACEL
type: DOMAIN
name: RuBisCO_lsu_C
description: Ribulose bisphosphate carboxylase, large subunit, C-terminal
Protein sequence:
MSLDFTVVIPARLRSTRLPGKPLLLIAGKPMVQHVWEQARKSGAGRVVIATDDASIVEACQAFGAEVLMTRADHESGTDRLAEVAAQLGLPADAIVVNVQGDEPLIPPVIIDQVAANLAAHPEAGIATLAEPIHDPETVFNPNAVKVVSDKNGLALSFSRAPLPWARDAFAKDRNQLPQGVPYRRHIGMYAYRVGFLQDFVSWGPCWLEQTEALEQLRALWHGVRIHVADAIEAPAVGVDTAQDLERVRRLLEA

Annotated regions:
Protein sequence:
MSNKIIKLGSIEIANDKPFVLFGGMNVLESRDLAMSIAETYAEVTQKLGIPYVFKASFDKANRSSVNSYRGPGMEEGLKIFEEIKKTFNLPLITDVHETYQCAPVAEVVDIIQLPAFLARQTDLVVAMAKTGAIINVKKPQFLAPHEMRHIITKFNEAGNDEIILCERGSCFGYNNLVVDMLGMDEMKQSGYPVIFDATHALQRPGGRADSAGGRRAQATELARSGMALGLAGLFIEAHPDPDNAKCDGPCALPLHQLENYLKQMKAIDDLVKSFEPIDTSK

Annotated regions:
phrase: SIEIANDKPFVLFGGMNVLESRDLAMSIAETYAEVTQKLGIPYVFKASFDKANRSSVNSYRGPGMEEGLKIFEEIKKTFNLPLITDVHETYQCAPVAEVVDIIQLPAFLARQTDLVVAMAKTGAIINVKKPQFLAPHEMRHIITKFNEAGNDEIILCERGSCFGYNNLVVDMLGMDEMKQSGYPVIFDATHALQRPGGRADSAGGRRAQATELARSGMALGLAGLFIEAHPDPDNAKCDGPCALPLHQLENYLKQMKAIDDLV
type: DOMAIN
name: DAHP1/KDSA
description: DAHP synthetase I/KDSA
Protein sequence:
MVKMIVGLGNPGSKYQQTKHNVGFMAVDRLVKDLDISFTEDKAFKALVGSAFINQEKIYFVKPTTFMNNSGLAVRALLTYYNISTKDLMVIYDDLDMAVGKIRLRQKGSAGGHNGIKSIIAHIGTQEFDRVKIGIGRPSHGMSVINHVLGKFDTDDMITINIALDKVDKAINYYLQEKSIEKTMQQFNG

Annotated regions:
phrase: SAGGHNGIKS
type: CONSERVED_SITE
name: Pept_tRNA_hydro_CS
description: Peptidyl-tRNA hydrolase, conserved site

phrase: YQQTKHNVGFMAV
type: CONSERVED_SITE
name: Pept_tRNA_hydro_CS
description: Peptidyl-tRNA hydrolase, conserved site
Protein sequence:
MSAWAAASLSRAAARCLLARGPGVRAAPPRDPRPSHPEPRGCGAAPGRTLHFTAAVPAGHNKWSKVRHIKGPKDVERSRIFSKLCLNIRLAVKEGGPNPEHNSNLANILEVCRSKHMPKSTIETALKMEKSKDTYLLYEGRGPGGSSLLIEALSNSSHKCQADIRHILNKNGGVMAVGARHSFDKKGVIVVEVEDREKKAVNLERALEMAIEAGAEDVKETEDEEERNVFKFICDASSLHQVRKKLDSLGLCSVSCALEFIPNSKVQLAEPDLEQAAHLIQALSNHEDVIHVYDNIE

Annotated regions:
phrase: NKWSKVRHIKGPKDVERSRIFSKLCLNIRLAVKEGGPNPEHNSNLANILEVCRSKHMPKSTIETALKM
type: DOMAIN
name: TACO1_YebC_N
description: TACO1/YebC-like, N-terminal domain

phrase: LLYEGRGPGGSSLLIEALSNSSHKCQADIRHILNKNGGVMAVGARHSFDKKGVIVVEVEDREKKAVNLERALEMAIEAGAEDVKETEDEEERNVFKFICDASSLHQVRKKLDSLGLCSVSCALEFIPNSKVQLAEPDLEQAAHLIQALSNHEDVIHVYDN
type: DOMAIN
name: TACO1_YebC-like_2nd/3rd_dom
description: TACO1/YebC-like, second and third domains
Protein sequence:
MAGVNNRVKITNDIELKDRLVAINRVTKVTKGGRTFSFSAIVVVGNEEGIIGWGLGKAGEVTAAIAKGVESAKKNLTRVPVLKGTVPHEQSAKFGGAEVFIKPASHGTGVVAGGAMRAVLESVGVTDVLAKSKGSSNPHNLVKATIMALGEMRDARMIAQNRGISVEKVFRG

Annotated regions:
phrase: GRTFSFSAIVVVGNEEGIIGWGLGKAGEVTAA
type: CONSERVED_SITE
name: Ribosomal_uS5_N_CS
description: Small ribosomal subunit protein uS5, N-terminal, conserved site

phrase: AKFGGAEVFIKPASHGTGVVAGGAMRAVLESVGVTDVLAKSKGSSNPHNLVKATIMALGEMRDARMIAQN
type: DOMAIN
name: Ribosomal_uS5_C
description: Small ribosomal subunit protein uS5, C-terminal

phrase: LKDRLVAINRVTKVTKGGRTFSFSAIVVVGNEEGIIGWGLGKAGEVTAAIAKGVESAKKNLTRV
type: DOMAIN
name: Ribosomal_uS5_N
description: Small ribosomal subunit protein uS5, N-terminal

phrase: LKDRLVAINRVTKVTKGGRTFSFSAIVVVGNEEGIIGWGLGKAGEVTAAIAKGVESAKKNLTR
type: DOMAIN
name: Ribosomal_uS5_N
description: Small ribosomal subunit protein uS5, N-terminal
Protein sequence:
MKILVLNAGSSSQKSCLYDLEFLPGHPPQPIWQAGIDWTVNPDYAVLTVKAQGIKQEINLSSQDRPAGIARMLDTLVTGETKVVANLADISIVGHRVVHGGTEYSQATMITPQVKETIKKLIPLAPSHNPAHLEGIEAIEQVLGDVPQVAVFDTAFHRSIPPESSLYPIPYQWSELGIRRYGFHGTSHQYCSQRAAELLGKPLESLKMVICHLGNGASLSAVKGGKSIDTTMGFTPLEGLMMGTRSGSIDPGILIYLEREYQYNPDSLNSLLNKESGLKGISGISGDMRAITTAMAEGNERAKLAFEMYIHRLKSLIGSMIASLEGLDVLVFTAGIGENSALVREKASQGWSFFGLELDLAKNAARPRDEDIASETSKVRVMVIATAEDWAIARECWHLSP

Annotated regions:
phrase: MVICHLGNGASLSAVKG
type: CONSERVED_SITE
name: Aliphatic_acid_kinase_CS
description: Aliphatic acid kinase, short-chain, conserved site

phrase: ILVLNAGSSSQ
type: CONSERVED_SITE
name: Aliphatic_acid_kinase_CS
description: Aliphatic acid kinase, short-chain, conserved site
Protein sequence:
MTDHYIDNFLNDVLPHLRIAVIGDIMVDRYVFGKVERISPEAPVPVNRVDHIKSVLGGAANVASNLANLDCNVYLAGLIGDDDNARLLRSLLDESGIDGSGLVARSHHATTTKMRILGARQQMVRLDFEEITPLDDLETAELATWLDVCIHSGLDGVILSDYHKGVLTDKVARQIIRTVKAAGIPILVDPKGKDWSKYDGADFVTPNMKELSECAGYEVANEGSEVVKAAMELHKKYDFANLMVTRSEKGITVVSHDGRVWNNPATAQEVFDVSGAGDTVAAAFLAAIAGHLSIRTSLQLANAAAGIVVRKVGTYPVHRSELIQLWTQWQPPRWSPYTALDWDQTARKIRSWQERGETVVFTNGCFDILHRGHVLYLQQAAMLGQHLIVGLNSDDSVRRLKGPARPLVRQEDRAVLLNALGCVDDVVIFNEDTPHDLLSVLRPDILVKGGDYRAEDVVGREFVKRVEIISFEEGYSTTGLVNKIVDLVKKGIL

Annotated regions:
phrase: VVFTNGCFDILHRGHVLYLQQAAMLGQHLIVGLNSDDSVRRLKGPARPLVRQEDRAVLLNALGCVD
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: DVSGAGDTVAAAF
type: CONSERVED_SITE
name: Carboh/pur_kinase_PfkB_CS
description: Carbohydrate/purine kinase, PfkB, conserved site

phrase: RIAVIGDIMVDRYVFGKVERISPEAPVPVNRVDHIKSVLGGAANVASNLANLDCNVYLAGLIGDDDNARLLRSLLDESGIDGSGLVARSHHATTTKMRILGARQQMVRLDFEEITPLDDLETAELATWLDVCIHSGLDGVILSDYHKGVLTDKVARQIIRTVKAAGIPILVDPKGKDWSKYDGADFVTPNMKELSECAGYEVANEGSEVVKAAMELHKKYDFANLMVTRSEKGITVVSHDGRVWNNPATAQEVFDVSGAGDTVAAAFLAAIAGHLSIRTSLQLANAAAGIVVRKVGT
type: DOMAIN
name: PfkB_dom
description: Carbohydrate kinase PfkB

phrase: RSWQERGETVVFTNGCFDILHRGHVLYLQQAAMLGQHLIVGLNSDDSVRRLKGPARPLVRQEDRAVLLNALGCVDDVVIFNEDTPHDLLSVLRPDILVKGGDYRAEDVVGREFVKRVEIISFEEGYSTTGLVNK
type: DOMAIN
name: RfaE_dom_II
description: RfaE bifunctional protein, domain II

phrase: RIAVIGDIMVDRYVFGKVERISPEAPVPVNRVDHIKSVLGGAANVASNLANLDCNVYLAGLIGDDDNARLLRSLLDESGIDGSGLVARSHHATTTKMRILGARQQMVRLDFEEITPLDDLETAELATWLDVCIHSGLDGVILSDYHKGVLTDKVARQIIRTVKAAGIPILVDPKGKDWSKYDGADFVTPNMKELSECAGYEVANEGSEVVKAAMELHKKYDFANLMVTRSEKGITVVSHDGRVWNNPATAQEVFDVSGAGDTVAAAFLAAIAGHLSIRTSLQLANAAAGIVVRKVGTYPVHRSELI
type: DOMAIN
name: RfaE_dom_I
description: RfaE bifunctional protein, domain I

phrase: FTNGCFDILHRGHVLYLQQAAMLGQHLIVGLNSDDSVRRLKGPARPLVRQEDRAVLLNALGCVDDVVIFNEDTPHDLLSVLRPDILVKGGDYR
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: LRIAVIGDIMVDRYVFGKVERISPEAPVPVNRVDHIKSVLGGAANVASNLANLDCNVYLAGLIGDDDNARLLRSLLDESGIDGSGLVARSHHATTTKMRILGARQQMVRLDFEEITPLDDLETAELATWLDVCIHSGLDGVILSDYHKGVLTDKVARQIIRTVKAAGIPILVDPKGKDWSKYDGADFVTPNMKELSECAGYEVANEGSEVVKAAMELHKKYDFANLMVTRSEKGITVVSHDGRVWNNPATAQEVFDVSGAGDTVAAAFLAAIAGHLSIRTSLQLANAAAGIVVRKVGTYPVHRSELI
type: DOMAIN
name: RfaE_dom_I
description: RfaE bifunctional protein, domain I