nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MMPGLKLYGALILCVLVLPFSRPSSQVLDCREVRSSFQFLYPGMKWTPETPVSGSDLQVCQPKGLTCCSRKMEERYLLIAKQNMESSLQATSAQLKGLIIQNAALFQEAFDMVLRLGRNSTLMVLREEFPGLGAGASGAVTQLFLDMSLYILGSDANVNDMVSTFFSRLFPLTYRRLLGNGAVAGISEECLRGAWKGSSAYGSFPKMMMTRLSRSLLATRVFLQALNLGIEVVNTTQHLRAGRDCGRSLLKLWYCPHCQSLLEARPCRPLCVSTMGACLGGTTEVQPHWRAYVDELGSLAAAMKGEQDIEAVVLRLHVIIRQALKQAVASKSKVSAQVSGMCVHAPPRVSRAVPVSAEHTSASTVNHNRPPMNFDPDETLFGRRREFISGLRGFSQFYSGLGEALCSKEPTSLNSSLCWNGQEMTDKFPGPGLKRVHPHGSESKQKTPEPVISQIIDKLKHINQLLRMVTLPEKRWRARQGGGGARRNPSGPGQTDEDEEGLESGDCDDEDECTGVSGLGPPPRRKRLRIFADLADNLAIDDLTLHELLLTPRLATDAHGGSSIPGAAHVPTAAFIFTITIIIFITLGLQ

Annotated regions:
Protein sequence:
MLEKQRSTAETFGIPLAVLLEITHRCPLQCPYCSNPVELDRSGKELTTDEWKKVLSELAEIGVLQVHFSGGEPTARKDLVELVKHASDVGLYTNLITSAVLLTRERLSELADAGLCHVQISFQGVEEGLADRVAGYRNAHRKKLEVAKWTRELDLPLTVNAVMHRQNLHQLPDIIQMSIDLDADRLEVANVQYYGWALKNRAALMPTVAQLDECTRLVEEARERLKGRLSIDYVVPDYYALRPKKCMGGWGRQFFNISPAGKVLPCHAAESITGLDFESVRSNHSIAWIWQNSEAFNRYRGTGWMKEPCKSCEFREIDFGGCRCQAFALTGDAANTDPACALSPLHETIFKQAEREAEGETNRFLYRNFAGGTLEPENDA

Annotated regions:
phrase: GWGRQFFNISPAGKVLPCHAAESITGLDFESVRSNHSIAWIWQNSEAFNRYRGTGWMKEPCKSCEFREIDFGGCRCQAFALTGDAANTDPA
type: DOMAIN
name: 4Fe4S-binding_SPASM_dom
description: 4Fe4S-binding SPASM domain

phrase: LAVLLEITHRCPLQCPYCSNPVELDRSGKELTTDEWKKVLSELAEIGVLQVHFSGGEPTARKDLVELVKHASDVGLYTNLITSAVLLTRERLSELADAGLCHVQISFQGVEEGLADRVAGYRNAHRKKLEVAKWTRELDLPLTVNAVMHRQNLHQLPDIIQMSIDLDADRLEVANVQYYGWALKNRAALMPTVAQLDECTRLVE
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: EITHRCPLQCPYCSNPVELDRSGKELTTDEWKKVLSELAEIGVLQVHFSGGEPTARKDLVELVKHASDVGLYTNLITSAVLLTRERLSELADAGLCHVQISFQGVEEGLADRVAGYRNAHRKKLEVAKWTRELDLPLTVNAVMHRQNLHQLPDII
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: ITHRCPLQCPY
type: CONSERVED_SITE
name: MoaA_NifB_PqqE_Fe-S-bd_CS
description: MoaA/NifB/PqqE, iron-sulphur binding, conserved site

phrase: GWGRQFFNISPAGKVLPCHAAESITGLDFESVRSNHSIAWIWQNSEAFNRYRGTGWMKEPCKSC
type: DOMAIN
name: 4Fe4S-binding_SPASM_dom
description: 4Fe4S-binding SPASM domain

phrase: FGIPLAVLLEITHRCPLQCPYCSNPVELDRSGKELTTDEWKKVLSELAEIGVLQVHFSGGEPTARKDLVELVKHASDVGLYTNLITSAVLLTRERLSELADAGLCHVQISFQGVEEGLADRVAGYRNAHRKKLEVAKWTRELDLPLTVNAVMHRQNLHQLPDIIQMSIDLDADRLEVANVQYYGWALKNRAALMPTVAQLDECTRLVEEARERLKG
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MSAVPWIIKYRPKRVEDVIDQEKAKEVLIPWIKKWLSGTPPEKRAALLWGPPGVGKTSLVEAICNEFNLEKIEMNASDFRRKGDIERVAIAAATKKPLPPWKGRLILLDEVDGLSPRGDEGAVAAILELIKKTKNPIVMTANDPWGTHLRPIREESLLVEFKRIPKTKAREFLLKICEKEGVYCEKEAVDYIIEKNKGDLRASINDLQSIAEAYGKVTLDLASALLVERDRVLTPWEMLQSLFYSKYSWQARKAVTSTDLDYDTLFLWIAENVPKQYGDDPYDLWRGMEAVSRADVIYGRIRRTMNWSLLPYFFNALGPGVALAKTKYHKRARWSYPEKIVLLARTKEERRVRDELASHLALLTHSSKSYVRREIIPMLQFIAQVNPNYFARLALGLRLSDPMIKYLAKSKYQLVKKYVEELKSSRTVKAEEQTKAKEVVKELKKEYEKGTKKGKGEKRRKGSDEGSGLLKWLKKD

Annotated regions:
phrase: LLWGPPGVGKTSLVEAICNEFNLEKIEMNASDFRRKGDIERVAIAAATKKPLPPWKGRLILLDEVDGLSPRGDEGAVAAILELIKKTKNPIVMTANDP
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: IPKTKAREFLLKICEKEGVYCEKEAVDYIIEKNKGDLRASINDLQSIAEAYGKVTL
type: DOMAIN
name: RFC_lid
description: Replication factor C, lid domain

phrase: EKRAALLWGPPGVGKTSLVEAICNEFNLEKIEMNASDFRRKGDIERVAIAAATKKPLPPWKGRLILLDEVDGLSPRGDEGAVAAILELIKKTKNPIVMTANDPWGTHLRPIREESLLVEFK
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VSRADVIYGRIRRTMNWSLLPYFFNALGPGVALAKTKYHKRARWSYPEKIVLLARTKEERRVRDELASHLALLTHSSKSYVRREIIPMLQFIAQVNPNYFARLALGLRLSDPMIKYLAKSKYQLVKKYVEELKSSRTVKAEEQTKAKEVVKEL
type: DOMAIN
name: DNA_replication_fac_RFC1_C
description: DNA replication factor RFC1, C-terminal
Protein sequence:
MLPFSMTGLEKDHTRGVLILANAHRRSERSRTASCAGPAVLFGGLITANIVAWAWAFALFADRPVVMATALLAWVFGLRHAVDADHIAAIDNVVRSLMQTGGTPRSAGLYFALGHSSVVVVATMLLALGVVSLGGDGLLKEIGSFIGASVSALFLLVIAAINLAIFASLWRTFRKAREQGIRDAAGLDALLAHRGILVRLLGPMFRLVTKPWHMYPLGFLFGLGFDTATEIGLLSISASEAARGASLADVMVFPALFAAGMALVDTADSTLMVSAYRWAFVDPMRKLWYNLTITGASVAVALFIGGIEALGLIGNRLDLSGGVWTLIDALNESLANVGLAVIALFAIAWLLSIVLYRRLIAGSSGLADTEVLECADATEAV

Annotated regions:
Protein sequence:
MNKFKNIAVYGGGSFGTSLASLAAQNCNNVTLFLRDEAIAKEILHNKTNVKYLGDIKLPAHLQATTNLDIIKDFELIIIAVPSYAFDDSIKLLKTHSISKDNTLLIATKGFARNPTTLFSDRLKTLLPHSPTAFFVGPNLAKELAKNLPASASIASLDIDIANKIAYNLSSKIFTTNVSSDIVTLQVAGALKNIFAIKSGIDLARKQGENARATLIVAALKEIAILSKALGGMQKNSDILLEGVVGDLVLTCYSLGSRNTKFGYELGISSDKKQFLQEYKELVEGREALKLVLDLIKKYNLHMPIISEVASCVIPYVIPAKAGMTYESTQQCLRRNDI

Annotated regions:
phrase: DIVTLQVAGALKNIFAIKSGIDLARKQGENARATLIVAALKEIAILSKALGGMQKNSDILLEGVVGDLVLTCYSLGSRNTKFGYELGISSDKKQFLQEYKELVEGREALKLVLDLIKKYNLHMPIISEVAS
type: DOMAIN
name: G3P_DH_NAD-dep_C
description: Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal

phrase: NIAVYGGGSFGTSLASLAAQNCNNVTLFLRDEAIAKEILHNKTNVKYLGDIKLPAHLQATTNLDIIKDFELIIIAVPSYAFDDSIKLLKTHSISKDNTLLIATKGFARNPTTLFSDRLKTLLPHSPTAFFVGPNLAKELAKNLPASASIASLD
type: DOMAIN
name: G3P_DH_NAD-dep_N
description: Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal
Protein sequence:
MADRTKQKQGSGSSALKLAGRSHKRGTFAPVAEAVEAIRQGQMVIVVDDEDRENEGDLTIAAEKTTPELINFMAKYGRGLICLPMTGEWLDRLEIPLMVRENTSQFSTAFCVSIEAKESTSTGISAADRAATARAAADPKTTPSDLARPGHMFPLRARDGGVLVRAGQTEAAVDLARTAGLNPVGVICEIMNEDGTMARVPHLRRFAKKHNLLMITIADLIEYRMRNERLVKQVAASKLPTEFGEFDLVAFESNLDGESHVALVKGDVGDGSDVLVRVHSRCLTGEAFHSARCDCGAQLTTAMQRIATEGRGILLYLNQEGRGIGLTNKIRAYHLQDQGYDTVEANERLGFKPDQRDYGIGAQILGELGVKTMRLLTNNPRKFVGLEGYGLSVSASLPLEVPTSGPARSYLRTKKKKLGHTLKSV

Annotated regions:
phrase: VAASKLPTEFGEFDLVAFESNLDGESHVALVKGDVGDGSDVLVRVHSRCLTGEAFHSARCDCGAQLTTAMQRIATEGRGILLYLNQEGRGIGLTNKIRAYHLQDQGYDTVEANERLGFKPDQRDYGIGAQILGELGVKTMRLLTNNPRKFVGLEGYGLSVSA
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MSAAEEDLIDYSDEELATTEAPAPAAGANGGVKGDSGNLTVSGNAAAAKKGSYVGIHSTGFREFLLKPELLRAISWCGFEHPSEVQQVCIPQAILGTDVLCQAKSGLGKTAVFVLTTLQQVEVVAGETSVLVMCHTRELAYQIRNEYQRFCHFMPDVKIGVFYGGVPISKDVEVLKNPETHPHIIVGTPGRLNALVRDKYLRLNSVKVFVLDECDKMLDQIDMRRDVQEIFRATPPQKQVMMFSATLSQEVRPICKKFMQNPLEIYIDNETKLTLYGLQQYYIKLEEREKNRRLNELLDELSFNQVIIFVKSTVRATELDKLLRECNFPSVAIHSGVSQEERIKRFNDFKDFNKRICVATDVFGRGIDVNKINLAINYDLPPDADSYLHRVGRAGRFGTKGLAISFVSNEADQEVLKAVEKRFEVALPEYPEGGVDSAAYTKTD

Annotated regions:
phrase: KNRRLNELLDELSFNQVIIFVKSTVRATELDKLLRECNFPSVAIHSGVSQEERIKRFNDFKDFNKRICVATDVFGRGIDVNKINLAINYDLPPDADSYLHRVGRAGRF
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: EVQQVCIPQAILGTDVLCQAKSGLGKTAVFVLTTLQQVEVVAGETSVLVMCHTRELAYQIRNEYQRFCHFMPDVKIGVFYGGVPISKDVEVLKNPETHPHIIVGTPGRLNALVRDKYLRLNSVKVFVLDECDKMLDQIDMRRDVQEIFRATPPQKQVMMFSATLSQEV
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: TGFREFLLKPELLRAISWCGFEHPSEVQ
type: DOMAIN
name: RNA_helicase_DEAD_Q_motif
description: RNA helicase, DEAD-box type, Q motif

phrase: IPQAILGTDVLCQAKSGLGKTAVFVLTTLQQVEVVAGETSVLVMCHTRELAYQIRNEYQRFCHFMPDVKIGVFYGGVPISKDVEVLKNPETHPHIIVGTPGRLNALVRDKYLRLNSVKVFVLDECDKMLDQIDMRRDVQEIFRATPPQKQVMMFSATLSQEVRPICKKFMQNPLE
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: GFEHPSEVQQVCIPQAILGTDVLCQAKSGLGKTAVFVLTTLQQVEVVAGETSVLVMCHTRELAYQIRNEYQRFCHFMPDVKIGVFYGGVPISKDVEVLKNPETHPHIIVGTPGRLNALVRDKYLRLNSVKVFVLDECDKMLDQIDMRRDVQEIFRATPPQKQVMMFSATLSQEVRPICKKFMQNPLEIYIDNETKLTLYGLQQ
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: GLQQYYIKLEEREKNRRLNELLDELSFNQVIIFVKSTVRATELDKLLRECNFPSVAIHSGVSQEERIKRFNDFKDFNKRICVATDVFGRGIDVNKINLAINYDLPPDADSYLHRVGRAGRFGTKGLAISFVSNEADQEVLKAVEKRFEVALPEYPEGGVDS
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: TELDKLLRECNFPSVAIHSGVSQEERIKRFNDFKDFNKRICVATDVFGRGIDVNKINLAINYDLPPDADSYLHRVGRAGRF
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like
Protein sequence:
MGSSSPAQTSNWYELFTGNWLSRPIRAVLVGALALPFVIWPRNQPQNSNPRLLAFFVYLLHLASIPWLYLVTKLVPEPYLDEIFHIPQAQKYCQGRFLEWDDKITTPPGLYLVSLITPGVVQRNGYLDYACSVQNLRAFNVFALAVLAYLALQCRREIEARLYEARFSTRLSNTSQYAVHTAFNIAFFPLLFFFSGLYYTDVASTAAVLVAFLNHLKRIGRDQNSVLSDLVTISLGVFTLFFRQTNVFWVVVFMGGLEAVHAVKTLRPERVDQPVILTLSEQLKHYAWRCSLGDVHDPPLHAMWPDDMIFCVLSLGIAALCNPIRVIRQIWPYITTLLLFGSFVAWNGGVVLVGDKSNHVATIHLPQMLYIWPFFAFFSLPLLIPYALPLANALRRLLYMKTSSWSISSSSNKSLSRKSSSKVSNSKGDVAVDAPGSEYPQPSKELQYFEVVFGSKIFLWPLYLLGTIIFSFGIVHYNTIIHPFTLADNRHYMFYVFRYTIRRAAWIRFALVIPYTVARWMTWGTMAGCSQWFMTMHGPACSAYSKGDGKSPFLNHPAFTNRGASPQQTDAAPPAEVKDLDANQQQELSQALKKDPLLASVEPATTSTGLIFLLATTLSLMTAPLVEPRYFIIPWVMWRLLVPAWKFHDHDSEGVAATLERHPKTKPLLLFLQRYDLRLILETFWFIVINAVTGYIFLTKPYVWKAEDGTVLDGGRLQRFMW

Annotated regions:
Protein sequence:
MARYIFITGGVVSSLGKGLASAALGALLQARGYTVRLRKLDPYLNVDPGTMSPFEHGEVFVTDDGAETDLDLGHYERFTGVSACKTDSVSSGRIYSDVLEKERRGDYLGKTIQVIPHVTNQIKDFIKIGDEDVDFMLCEIGGTVGDIEALPFFEAIRQFNQDRRGECIFMHLTLLPYIAAAGELKTKPTQHSVKELRSIGIAPDILMCRSEHEIPQKEREKLALFCNVRPDAVISALDLKSIYDAPLAYHREGMDRAVLEAFGITDAPEPDMTKWDDVMDRVEHPEGTVKIAIVGKYTQLGDAYKSIAEALTHGGLDNRVKVKVEWINSEVFESEDKITPQLQGFNAILVPGGFGERGTEGKIKAAQYAREHGIPYLGICLGMQMAVIEAARNMAGIKDAGSEEFDHESGEKRFTPIVYHLKEWVEGNRTIQRDASDNKGGTMRLGAYNATLSEGSRVAEIYGDTAISERHRHRYEVDMTYRDAIEATGLKFSGISPDGKLPEIVEIPDHPWYIGVQFHPELKSRPFDPHPLFASFVEAAVKQSRLV

Annotated regions:
phrase: VKIAIVGKYTQLGDAYKSIAEALTHGGLDNRVKVKVEWINSEVFESEDKITPQLQGFNAILVPGGFGERGTEGKIKAAQYAREHGIPYLGICLGMQMAVIEAARNMAGIKDAGSEEFDHESGEKRFTPIVYHLKEWVEGNRTIQRDASDNKGGTMRLGAYNATLSEGSRVAEIYGDTAISERHRHRYEVDMTYRDAIEATGLKFSGISPDGKLPEIVEIPDHPWYIGVQFHPELKSRPFDPHPLFASF
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain

phrase: RYIFITGGVVSSLGKGLASAALGALLQARGYTVRLRKLDPYLNVDPGTMSPFEHGEVFVTDDGAETDLDLGHYERFTGVSACKTDSVSSGRIYSDVLEKERRGDYLGKTIQVIPHVTNQIKDFIKIGDEDVDFMLCEIGGTVGDIEALPFFEAIRQFNQDRRGECIFMHLTLLPYIAAAGELKTKPTQHSVKELRSIGIAPDILMCRSEHEIPQKEREKLALFCNVRPDAVISALDLKSIYDAPLAYHREGMDRAVLEAF
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: DAYKSIAEALTHGGLDNRVKVKVEWINSEVFESEDKITPQLQGFNAILVPGGFGERGTEGKIKAAQYAREHGIPYLGICLGMQMAVIEAARNMAGIKDAGSEEFDHESGEKRFTPIVYHLKEWVEGNRTIQRDASDNKGGTMRLGAYNATLSEGSRVAEIYGDTAISERHRHRYEVDMTYRDAIEATGLKFSGISPDGKLPEIVEIPDHPWYIGVQFHPELKSRPFDPHPLFASFV
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: RYIFITGGVVSSLGKGLASAALGALLQARGYTVRLRKLDPYLNVDPGTMSPFEHGEVFVTDDGAETDLDLGHYERFTGVSACKTDSVSSGRIYSDVLEKERRGDYLGKTIQVIPHVTNQIKDFIKIGDEDVDFMLCEIGGTVGDIEALPFFEAIRQFNQDRRGECIFMHLTLLPYIAAAGELKTKPTQHSVKELRSIGIAPDILMCRSEHEIPQKEREKLALFCNVRPDAVISALDLKSIYDAPLAYHREGMDRAVL
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal
Protein sequence:
MLDKLKESLRNSPVIKKGEYDYFVNPVTDGIPLTEPELLEEIADEIVRRFNPDPASVDKIVCIEAMGIHHATVLSLKTRIPFVVVRKRRYGLPGEVAVHQMTGYSEGELYINGVDGDDRVMVIDDVVSTGGTLLAVLEALREMEVEVVDVVTVIDKGEGSRVVKERTGFTVRSLVKADVVDGRVTVEDIPDGG

Annotated regions:
phrase: IADEIVRRFNPDPASVDKIVCIEAMGIHHATVLSLKTRIPFVVVRKRRYGLPGEVAVHQMTGYSEGELYINGVDGDDRVMVIDDVVSTGGTLLAVLEAL
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: LEEIADEIVRRFNPDPASVDKIVCIEAMGIHHATVLSLKTRIPFVVVRKRRYGLPGEVAVHQMTGYSEGELYINGVDGDDRVMVIDDVVSTGGTLLAVLEALREMEVEVVDVVTVIDKGEGSRVV
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain
Protein sequence:
MEDERSLSDICGGRLALHRRYYSPSCLEFCLSCPRISLRSITAVTCTVWLAAYGLFTLCENSMILSAAIFITLLGLLGYLHFVKIDHETLLIIDSLGIQMTSSYASGKESTTFIEMGKVKDVIINEAIYMQKVIYYLCILLKDPVEPHGISQVVPIFQSAKPRLDCLIEVYRSCQEILAHQKAASTSP

Annotated regions:
phrase: TLLIIDSLGIQMTSSYASGKESTTFIEMGKVKDVIINEAIYMQKVIYYLCILLKDPVEPHGISQVVPIF
type: DOMAIN
name: GPI-GlcNAc_Trfase_PIG-H_dom
description: GPI-GlcNAc transferase complex, PIG-H component, conserved domain
Protein sequence:
MKLILTQEVTGLGAPGDVVEVKDGYGRNYLVPRGLAMRWTRGGEKTVDSIKAARASRAVRDHDHAEQIKTKLEAQPVAVKVRAGAGGRLFGAVTVTEIAGALADASGEQVDKRTIVVTNPIKSLGAHEVSVKLHDEVSAVVALNVIPA

Annotated regions:
phrase: GAPGDVVEVKDGYGRNYLVPRGLAMRW
type: DOMAIN
name: Ribosomal_bL9_N
description: Large ribosomal subunit protein bL9, N-terminal

phrase: HAEQIKTKLEAQPVAVKVRAGAGGRLFGAVTVTEIAGALADASGEQVDKRTIVVTNPIKSLGAHEVSVKLHDEVSAVVALNV
type: DOMAIN
name: Ribosomal_bL9_C
description: Large ribosomal subunit protein bL9, C-terminal

phrase: MKLILTQEVTGLGAPGDVVEVKDGYGRNYLVPRGLAMRWTRGGE
type: DOMAIN
name: Ribosomal_bL9_N
description: Large ribosomal subunit protein bL9, N-terminal
Protein sequence:
MEVTFFGTSAGLPTKERNTQAIALNLEPYSNSIWLFDVGEGTQHQILHHAIKLGKVTHIFITHMHGDHIFGLPGLLSSRSFQGGEQKPLTLVGPKGIKAYVEMSMNLSESHLNYPITYIEIDDHLTYHHDGFTVEAHLLNHGIPSYGYRVMAPETTGTINVEALKNIGLEPGPKYQEVKSHDTFEHNGQVYQSKDFRGESKQGPVVAIFGDTKPCSNERVISRDADVMVHEATYIDGEKHLANNYHHSHIEDVFALIKEANVKRTLITHLSNRYNTEDINEIYQILIQNEDTPNFNFVKDFDSFKV

Annotated regions:
phrase: SNSIWLFDVGEGTQHQILHHAIKLGKVTHIFITHMHGDH
type: DOMAIN
name: tRNase_Z_dom
description: tRNase Z endonuclease
Protein sequence:
MKKIVFATNNSHKLQEIKYALKGFYEIVSLKDIGFTEDIPEPYETLEENADTKSETIAHKFHINCFADDTGLEVEALNGAPGVYSARYAGEDCSFSDNMDKLMHEMQTKENRKAKFRTVISLILNQKKYQFQGEVHGTIATEKTGSKGFGYDPIFIPNGYTTSFAEMSMEEKNKISHRGRALKKLVDFLKTSST

Annotated regions:
Protein sequence:
MPGESAAARVRPTTPVDWSPVTTSDGGSVPPPVGSRPRTPRPVPLSGLADLVGRPSSEASDVVVSGLTLASAEVCPGDLYAALPGARTHGVRYVGDAVERGAVAVLTDPSGRQEAAATGLPVCVVDDPRAVLGEVADRIYDRPSERMQVIGITGTNGKTTTAYLVEAGLAAAGRATGLIGTVQTQTRAADGGVTALPSVRTTPEAPAVHALLAAMAEAGVSSVVMEVSSHALVLGRVGAVRFAAAGFTNLGRDHLDFHGDLEEYFRAKSLLFDGRAAVEVVDVDDEHGRRLLDRPGRPRPVTVSTEGAHADWRATDVAPGADGGSTFTLHGPDGLRRQGSVRLPGRFNVANAVLAVALLDAVGVPVDAALEGIASTVVPGRMEPVEAGQPFVAAVDYAHTPDAVATALGALRTATAGRLITVLGCGGDRDPGKRAAMGAAAAAGSDVLVVTDDNPRSEEPAVIRAAMLAGVLDVPEDRRAEVHEVGDRREAIAAAVALARPGDTVLVAGKGHETGQEIAGTVHPFDDRAVLREVLAAGVPR

Annotated regions:
phrase: VSGLTLASAEVCPGDLYAALPGARTHGVRYVGDAVERGAVAVLTDPSGRQEAAATGLPVCVVDDPRAVLGEVADR
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: GRMEPVEAGQPFVAAVDYAHTPDAVATALGALRTATAGRLITVLGCGGDRDPGKRAAMGAAAAAGSDVLVVTDDNPRSEEPAVIRAAMLAGVLDVPEDRRAEVHEVGDRREAIAAAVALARPGDTVLVAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: ITGTNGKTTTAYLVEAGLAAAGRATGLIGTVQTQTRAADGGVTALPSVRTTPEAPAVHALLAAMAEAGVSSVVMEVSSHALVLGRVGAVRFAAAGFTNLGRDHLDFHGDLEEYFRAKSLLFDGRAAVEVVDVDDEHGRRLLDRPGRPRPVTVSTEGAHADWRATDVAPGADGGSTFTLHGPDGLRRQGSVRLPGRFNVANAVLAVA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central
Protein sequence:
MKEIEKLKEEYPLLNKLIEIEEVFWVNPNMEKYETAIKDSPLSEENVKDAEERLKRFASYIAKVFPETKDTGGIIESPLVKIPSMKQSLEKNYEQPILGELLLKCDSHLPISGSIKARGGIYEVLKHAEQLALQQGMLTEEDDYSILDSDTCREFFATYSIAVGSTGNLGLSIGIMSAKLGFNVTVHMSADAKQWKKDLLRSKGVNVIEYEADYSKAVEEGRRQADADPSCYFVDDENSHDLFLGYAVAASRLQKQLEELEIIVDEEHPLFVYLPCGVGGGPGGVAFGLKLLYKDNVHCFFAEPTHSPCMLIGLMTGLHDKIAVQDIGIDNVTDADGLAVGRPSGFVGKTMEPFLSGNYTVSDEELYRLLKELADTENIYLEPSALAGMIGPVKVCKEDAYLQEQQLMEKMKKGTHIVWGTGGSMVPEDVMNGYYKTGEALTILEK

Annotated regions:
phrase: DSHLPISGSIKARG
type: BINDING_SITE
name: Ser/Thr_deHydtase_PyrdxlP-BS
description: Serine/threonine dehydratase, pyridoxal-phosphate-binding site

phrase: GIIESPLVKIPSMKQSLEKNYEQPILGELLLKCDSHLPISGSIKARGGIYEVLKHAEQLALQQGMLTEEDDYSILDSDTCREFFATYSIAVGSTGNLGLSIGIMSAKLGFNVTVHMSADAKQWKKDLLRSKGVNVIEYEADYSKAVEEGRRQADADPSCYFVDDENSHDLFLGYAVAASRLQKQLEELEIIVDEEHPLFVYLPCGVGGGPGGVAFGLKLLYKDNVHCFFAEPTHSPCMLIGLMTGLHDKIAVQDIGIDNVTDADGLAVGRPSGFVGKTMEPFLSGNYTVSDEELYRLLKELADTENIYLEPSALAGMIG
type: DOMAIN
name: TrpB-like_PALP
description: Tryptophan synthase beta chain-like, PALP domain
Protein sequence:
MTQFDKQYNSIIKDIINNGISDEEFDVRTKWDSDGTPAHTLSVISKQMRFDNSEVPILTTKKVAWKTAIKELLWIWQLKSNDVNDLNMMGVHIWDQWKQEDGTIGHAYGFQLGKKNRSLNGEKVDQVDYLLHQLKNNPSSRRHITMLWNPDELDAMALTPCVYETQWYVKHGKLHLEVRARSNDMALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPELWINPEVKDFYDFTIDDFKLINYKHGDKLLFEVAV

Annotated regions:
phrase: KQYNSIIKDIINNGISDEEFDVRTKWDSDGTPAHTLSVISKQMRFDNSEVPILTTKKVAWKTAIKELLWIWQLKSNDVNDLNMMGVHIWDQWKQEDGTIGHAYGFQLGKKNRSLNGEKVDQVDYLLHQLKNNPSSRRHITMLWNPDELDAMALTPCVYETQWYVKHGKLHLEVRARSNDMALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNLKIQMEREQFEAPELWINPEVKDFYDFTIDDFKLINYKHGDKLLFEVA
type: DOMAIN
name: Thymidate_synth/dCMP_Mease_dom
description: Thymidylate synthase/dCMP hydroxymethylase domain

phrase: QYNSIIKDIINNGISDEEFDVRTKWDSDGTPAHTLSVISKQMRFDNSEVPILTTKKVAWKTAIKELLWIWQLKSNDVNDLNMMGVHIWDQWKQEDGTIGHAYGFQLGKKNRSLNGEKVDQVDYLLHQLKNNPSSRRHITMLWNPDELDAMALTPCVYETQWYVKHGKLHLEVRARSNDMALGNPFNVFQYNVLQRMIAQVTGYELGEYIFNIGDCHVYTRHIDNL
type: DOMAIN
name: Thymidate_synth/dCMP_Mease_dom
description: Thymidylate synthase/dCMP hydroxymethylase domain

phrase: RRHITMLWNPDELDAMALTPCVYETQWY
type: ACTIVE_SITE
name: Thymidylate_synthase_AS
description: Thymidylate synthase, active site
Protein sequence:
MALEMDSKNSNSAVTGDAAAATTKTNKAKENNNLAGSKKNQSQNLVNGNGTAADGPATKKKGKKNRNKSPPVSTDEAALSNGHVEEKKPEGDGDADADANANVVAVKDEKAEGGDGADAAELDTEDIDLDALHDAGIHVNISCPGSELLTVQLSSMELVQEIHQLLMDREESCHRTCFSLQLDNVTLDNFAELKTIEQLESGSTIKVVEEPYTMREARIHVRHVRDLLKNLDPADAYNGIECTSLTYLNTITQGDLLDKKKTRPDSVDCTPPDYVTPGVFEPPLLPLHPNFKNAKGPQALKVLTTSAWNPPPGPRKLHGDLMYLYVITMEEKRYHISACSRGFFINQSTDDTFNPKPDNPSYLSHSLIDLLSHISPSFRRAFQAIQKRRTLRHAFERVATPYQVYQWAAPNLEHTVDAIRAEDAFSSKLGYEEHIPGQTRDWNEELQTTRELPRKTLPERLLRERAIFKVHGDFVTAATRGAMAVIDGNVLAINPGEDSKMQMFIWNNIFFSLGFDVRDHYKELGGDYAAYVAPRYDLHGVRVYNAVDVEGLYTLGTVVIDYRGYRVTAQSIIPGILEREQEQSVVYGSIDFGKTVLSHPKYLELLRQAGKHLKILPHSVYNERDEPVELCSSVECKGIIGNDGRHYILDLLRTFPPDVNFLKLQEVKLSTELVEMGFPIEHRHKLCCLRQELLEAFVEDRYVNFIRIAAVHLQQLNAKKPEETQSEEKKQLPAIEEAEKENKENLNVNETPNEKEKDTPVETKNAEAMVNAIREAQSNVATSNEIQAAEVVKQACAAVGSMKEKEFDFRFNPDVFSPGIRHVDGEEGTSGSVAKQKLLVQDAAEFLVVKQIPAFVKEHLSHSSPPIDGQNLTESLHSHGINVRYLGKVIKALGQMPRMDYLYRIAVMELIVRATKHIYYTYMQSTDPMHLSVAISHFLNCLLTNGPINPVVSNDEMHKKRGGNGGKHNKHKSSKGGKGQQQPAINQNGGSTTSSSSSANAYDWTLVTPRSLWQQIRKESKAYWDWDLDCDSMDSAMSKFGIMRICLLRAFCLKVGIQVLLREYNFDSKHKPTFGDDDIVNVFPVVKHISPRASDAYNFYTTGQAKIQQGLFKEGYELISEALNLLNNVFGAMHQENGSCLRMLARLSYLLGDAQDALAIQQRAVIMSERVNGIDNPSTILEYTHLSLYSFANGHVGMSLKLLYRARYLLVLTCGEDHPEVALIDSNISLILHALGEYELSLRFIEHALKLNLKYFGNKAMHVAVSYHLMARTQSCMGDFRSALNNEKETYSIYKSQLGEKHEKTRDSAECLRLLTQQAVLLQRKMNDIYSNGKLTSDLPPIHITPPSMGSVLEMLNTINGILFVQISQRDIVKVRSEIEKRMKANTDVNEAIKSMVAAANNNGESEVLAPQDNNKEQAATAQQLTNGDKVAVSS

Annotated regions:
phrase: PIDGQNLTESLHSHGINVRYLGKVIKALGQMPRMDYLYRIAVMELIVRATKHIYYTYMQSTDPMHLSVAISHFLNCLLTNGPINPVVSNDEMHKKRGGNGGKHNKHKSSKGGKGQQQPAINQNGGSTTSSSSSANAYDWTLVTPRSLWQQIRKESKAYWDWDLDCDSMDSAMSKFGIMRICLLRAFCLKVGIQVLLREYN
type: DOMAIN
name: CLU-central
description: CLU central domain

phrase: SPPIDGQNLTESLHSHGINVRYLGKVIKALGQMPRMDYLYRIAVMELIVRATKHIYYTYMQSTDPMHLSVAISHFLNCLLTNGPINPVVSNDEMHKKRGGNGGKHNKHKSSKGGKGQQQPAINQNGGSTTSSSSSANAYDWTLVTPRSLWQQIRKESKAYWDWDLDCDSMDSAMSKFGIMRICLLRAFCLKVGIQVLLREYN
type: DOMAIN
name: CLU-central
description: CLU central domain

phrase: DWNEELQTTRELPRKTLPERLLRERAIFKVHGDFVTAATRGAMAVIDGNVLAINPGEDSKMQMFIWNNIFFSLGFDVRDHYKELGGDYAAYVAPRYDLHGVRVYNAVDVEGLYTLGTVVIDYRGYRVTAQSIIPGILEREQEQSVVYGSIDFGKTVLSHPKYLELLRQAGKHLKILPHSVYNERDEPVELCSSVECKGIIGNDGRHYILDLLRTFPPDVN
type: DOMAIN
name: CLU_dom
description: CLU domain

phrase: ELVQEIHQLLMDREESCHRTCFSLQLDNVTLDNFAELKTIEQLESGSTIKVVEEPYTMREARIHVRHVRD
type: DOMAIN
name: CLU_N
description: Clustered mitochondria protein, N-terminal

phrase: RAEDAFSSKLGYEEHIPGQTRDWNEELQTTRELPRKTLPERLLRERAIFKVHGDFVTAATRGAMAVIDGNVLAINPGEDSKMQMFIWNNIFFSLGFDVRDHYKELGGDYAAYVAPRYDLHGVRVYNAVDVEGLYTLGTVVIDYRGYRVTAQSIIPGILEREQEQSVVYGSIDFGKTVLSHPKYLELLRQAGKHLKILPHSVYNERDEPVELCSSVECKGIIGNDGRHYILDLLRTFPPDVNF
type: DOMAIN
name: CLU_dom
description: CLU domain

phrase: DLMYLYVITMEEKRYHISACSRGFFINQSTDDTFNPKPDNPSYLSHSLIDLLSHISPSFRRAFQ
type: DOMAIN
name: GSKIP_dom
description: GSKIP domain
Protein sequence:
MTKPNIYGLFLPELKEKMTELGIESYRGAQIAEWIYKRGVKDFNLMSNLPQRQRQLLQEHFYICTPEILGEQHSADSQTSKLLMAFEDSAAIETVLMRQSYGNSVCVSTQVGCAMGCAFCASTLHGFSRNLSGGEILAQVLYLNEWLQSEEEKVDSIVIMGIGEPLANYHEVLRFIKLCHEPYCLNMSYRNITLSTSGLVPAIRQLAEEKIPITLAISLHAANDALRSQLMPVNHTYPIEQLLSAADYYADQTSRRVTYEYLLIAGINDTMQHAKELAGLLHKRLAAVNLIPVNSVLERGWARPADKKIREFEAALKTFGVNVTVRREMGADISAACGQLRNKRL

Annotated regions:
phrase: STQVGCAMGCAFCASTLHGFSRNLSGGEILAQVLYLNEWLQSEEEKVDSIVIMGIGEPLANYHEVLRFIKLCHEPYCLNMSYRNITLSTSGLVPAIRQLAEEKIPITLAISLHAANDALRSQLMPVNHTYPIEQLLSAADYYADQTSRRVTYEYLLIAGINDT
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: NIYGLFLPELKEKMTELGIESYRGAQIAEWIYKRGVKDFNLMSNLPQRQRQLLQEHFY
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: QSYGNSVCVSTQVGCAMGCAFCASTLHGFSRNLSGGEILAQVLYLNEWLQSEEEKVDSIVIMGIGEPLANYHEVLRFIKLCHEPYCLNMSYRNITLSTSGLVPAIRQLAEEKIPITLAISLHAANDALRSQLMPVNHTYPIEQLLSAADYYADQTSRRVTYEYLLIAGINDTMQHAKELAGLLHKRLAAVNLIPVNSVLERGWARPADKKIREFEAALKTFGVNVTVRREMGA
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MEPGEVKDRILENISLSVKKLQSYFAACEDEIPAIRNHDKVLQRLCEHLDHALLYGLQDLSSGYWVLVVHFTRREAIKQIEVLQHVATNLGRSRAWLYLALNENSLESYLRLFQENLGLLHKYYVKNALVCSHDHLTLFLTLVSGLEFIRFELDLDAPYLDLAPYMPDYYKPQYLLDFEDRLPSSVHGSDSLSLNSFNSVTSTNLEWDDSAIAPSSEDYDFGDVFPAVPSVPSTDWEDGDLTDTVSGPRSTASDLTSSKASTRSPTQRQNPFNEEPAETVSSSDTTPVHTTSQEKEEAQALDPPDACTELEVIRVTKKKKIGKKKKSRSDEEASPLHPACSQKKCAKQGDGDSRNGSPSLGRDSPDTMLASPQEEGEGPSSTTESSERSEPGLLIPEMKDTSMERLGQPLSKVIDQLNGQLDPSTWCSRAEPPDQSFRTGSPGDAPERPPLCDFSEGLSAPMDFYRFTVESPSTVTSGGGHHDPAGLGQPLHVPSSPEAAGQEEEGGGGEGQTPRPLEDTTREAQELEAQLSLVREGPVSEPEPGTQEVLCQLKRDQPSPCLSSAEDSGVDEGQGSPSEMVHSSEFRVDNNHLLLLMIHVFRENEEQLFKMIRMSTGHMEGNLQLLYVLLTDCYVYLLRKGATEKPYLVEEAVSYNELDYVSVGLDQQTVKLVCTNRRKQFLLDTADVALAEFFLASLKSAMIKGCREPPYPSILTDATMEKLALAKFVAQESKCEASAVTVRFYGLVHWEDPTDESLGPTPCHCSPP

Annotated regions:
phrase: RILENISLSVKKLQSYFAACEDEIPAIRNHDKVLQRLCEHLDHALLYGLQDLSSGYWVLVVHFTRREAIKQIEVLQHVATNLGRSRAWLYLALNENSLESYLRLFQENLGLLHKYYVKNALVCSHDHLTLFLTLVSGLEFIRFE
type: DOMAIN
name: RUN_PLEKHM2
description: PLEKHM2, RUN domain

phrase: FTRREAIKQIEVLQHVATNLGRSRAWLYLALNENSLESYLRLFQENLGLLHKYYVKNALVCSHDHLTLFLTLVSGLEFIRFELDL
type: DOMAIN
name: Run_dom
description: RUN domain

phrase: SRAWLYLALNENSLESYLRLFQENLGLLHKYYVKNALVCSHDHLTLFLTLVSGLEFIRFELDL
type: DOMAIN
name: Run_dom
description: RUN domain

phrase: RNHDKVLQRLCEHLDHALLYGLQDLSSGYWVLVVHFTRREAIKQIEVLQHVATNLGRSRAWLYLALNENSLESYLRLFQENLGLLHKYYVKNALVCSHDHLTLFLTLVSGLEFIRFELDLDA
type: DOMAIN
name: Run_dom
description: RUN domain
Protein sequence:
MPATTRLITIYGATGNQGGGVARSLLKNPCFQVRALTRNPNSPASQELAGLGAEIRRADGFDSNSLLAAFEGSWGVFVNINSDDKAFRPAGPTEYDLGMKIVDMAAQAGVQHFVFSSGPSSTELTNGKIRMKAMEMKNKIERYARNNTQFQTVSFICAAWYLENFLVKEIAPLFGGFPFVADAEAFLTFRCPRWGGKEDVPFISISDDYGDIVQGLFLDPHRWNGHVVHGCSDILTFDELVTHFQNVTGQKARFQPLESWETFDTFGVPELEDTKLMFGLTQTTGGLYFGPEPSEKNTAAALKRATAAALGLPRDQQTLITVKGWFQKHFPVTPN

Annotated regions:
phrase: TRLITIYGATGNQGGGVARSLLKNPCFQVRALTRNPNSPASQELAGLGAEIRRADGFDSNSLLAAFEGSWGVFVNINSDDKAFRPAGPTEYDLGMKIVDMAAQAGVQHFVFSSGPSSTELTNGKIRMKAMEMKNKIERYARNNTQFQTVSFICAAWYLENFLVKEIAPLFGGFPFVADAEAFLTFRCPRWGGKEDVPFISISDDYGDIVQGLFLDPHRWNGHVVHGCSDILTFDELVTHFQNVTGQKARFQPLESWETFDTFGVPELEDTKLMFGLTQ
type: DOMAIN
name: NmrA-like
description: NmrA-like domain
Protein sequence:
MNGTEGENFYIPFSNKTGLARSPFEYPQYYLAEPWKYSVLAAYMFFLILVGFPVNFLTLFVTVQHKKLRTPLNYILLNLAVANLFMVLFGFTLTMYSSMNGYFVFGPTMCNFEGFFATLGGEMSLWSLVVLAIERYIVICKPMGNFRFGSTHAYMGVAFTWFMALSCAAPPLVGWSRYLPEGMQCSCGPDYYTLNPNFNNESFVIYMFLVHFIIPFIVIFFCYGRLLCTVKEAAAAQQESASTQKAEKEVTRMVVLMVIGFLVCWVPYASVAFYIFTHQGSDFGATFMTVPAFFAKTSALYNPIIYILMNKQFRNCMITTLCCGKNPLGDEDSGASTSKTEVSSVSTSQVSPA

Annotated regions:
phrase: VNFLTLFVTVQHKKLRTPLNYILLNLAVANLFMVLFGFTLTMYSSMNGYFVFGPTMCNFEGFFATLGGEMSLWSLVVLAIERYIVICKPMGNFRFGSTHAYMGVAFTWFMALSCAAPPLVGWSRYLPEGMQCSCGPDYYTLNPNFNNESFVIYMFLVHFIIPFIVIFFCYGRLLCTVKEAAAAQQESASTQKAEKEVTRMVVLMVIGFLVCWVPYASVAFYIFTHQGSDFGATFMTVPAFFAKTSALYNPII
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM

phrase: VPAFFAKTSALYNPII
type: BINDING_SITE
name: Retinal_BS
description: Visual pigments (opsins) retinal binding site

phrase: NGTEGENFYIPFSNKTGLARSPFEYPQYYLAEPWK
type: DOMAIN
name: Rhodopsin_N
description: Rhodopsin, N-terminal
Protein sequence:
MDQGMADELARLAPLLSGRIGRTIVLVGLMGAGKSCVGRRLAARLGLDFVDSDAEFEAASGSSISDYFARFGEAAFREGERKVIARLLDGPPVVLATGGGAFVDPTTRERIKAAGTSVWIRADLELLLKRTVGRDHRPLLKQGDPREILGRLMEARYPIYAEADIIVESTDEVPEATVIRVMEGLITYLDLEKTV

Annotated regions:
phrase: REGERKVIARLLDGPPVVLATGGGA
type: CONSERVED_SITE
name: Shikimate_kinase_CS
description: Shikimate kinase, conserved site
Protein sequence:
MTVIPASARIHPSSVIEDGAVIGENVTIGPFCHVGSKVVLGDGAEFLSHVVLTGKTVVGKNSRIFPNAVIGGEPQSIHHSGEETTLTIGDNCTMREGVTINCGTVEGGGHTVVGSNNLFLANSHVAHDCQLGNHIILSNNVMLAGHVKIGDRAILGGGSAVHQFTRIGRQAFIGGLSACSYDVIPYGMLNGNPGLLGGLNVVGMTRAGVERATIHRVRKAYKALFDEEGAIREKAAAIREEFADCAEVIEILDFIVAESDRALSSPFRGKS

Annotated regions:
phrase: DVIPYGMLNGNPGLLGGLNVVGMTRAGVERATIHRVRKAYKALFDEEGAIREKAAAIREEFADCAEVIEILDFIVAESD
type: DOMAIN
name: Acetyltransf_C
description: UDP N-acetylglucosamine O-acyltransferase, C-terminal

phrase: GAVIGENVTIGPFCHVGSKVVLGDGAEFLSHVVLT
type: REPEAT
name: Hexapep
description: Hexapeptide repeat