nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MRSSIHASRLRKMGQSIPASTGPMARSANRFLQNRAAIFGLVLLTPLLFAVLTYPLWLPYKPNDIDLMAMNSAPSWKHWFGTDGVGRDVFARTMEGGRISLLVAVSSVVLSTAIGFLIGAISALGGRWADAIAMRSVDLAMTLPPVIFLLVLASIIGSGIWSTVVVIALLSWPVLSRMIRARLLELREREFVMASRGMGAGLGHLLFRHGLPNSIDILVVYATLQVANAILLEAGLSFLGLGVPPPAASWSNMLNAARSTAVLEQFPWQWLFPGGALVLAVLAINFIGDGLRDAFDPRAELN

Annotated regions:
phrase: MARSANRFLQNRAAIFGLVLLTPLLFAVLTYPLWLPYKPNDIDLMAMNSA
type: DOMAIN
name: OppC_N
description: Oligopeptide transport permease C-like, N-terminal domain

phrase: GRISLLVAVSSVVLSTAIGFLIGAISALGGRWADAIAMRSVDLAMTLPPVIFLLVLASIIGSGIWSTVVVIALLSWPVLSRMIRARLLELREREFVMASRGMGAGLGHLLFRHGLPNSIDILVVYATLQVANAILLEAGLSFLGLGVPPPAASWSNMLNAARSTAVLEQFPWQWLFPGGALVLAVLAINFI
type: DOMAIN
name: MetI-like
description: ABC transporter type 1, transmembrane domain MetI-like

phrase: GFLIGAISALGGRWADAIAMRSVDLAMTLPPVIFLLVLASIIGSGIWSTVVVIALLSWPVLSRMIRARLLELREREFVMASRGMGAGLGHLLFRHGLPNSIDILVVYATLQVANAILLEAGLSFLGLGVPPPAASWSNMLNAARSTAVLEQFPWQWLFPGGALVLAVLAINFIGDGLRDAFDPR
type: DOMAIN
name: MetI-like
description: ABC transporter type 1, transmembrane domain MetI-like

phrase: RISLLVAVSSVVLSTAIGFLIGAISALGGRWADAIAMRSVDLAMTLPPVIFLLVLASIIGSGIWSTVVVIALLSWPVLSRMIRARLLELREREFVMASRGMGAGLGHLLFRHGLPNSIDILVVYATLQVANAILLEAGLSFLGLGVPPPAASWSNMLNAARSTAV
type: DOMAIN
name: MetI-like
description: ABC transporter type 1, transmembrane domain MetI-like
Protein sequence:
MDNIEQRVKKIVAEQLGVAEADIKNESSFVNDLGADSLDTVELVMALEDEFGMEIPDEEAEKITTVQQAIDYARANVKA

Annotated regions:
phrase: QRVKKIVAEQLGVAEADIKNESSFVNDLGADSLDTVELVMALEDEFGMEIPDEEAEKITTVQQAID
type: DOMAIN
name: PP-bd_ACP
description: Phosphopantetheine binding ACP domain

phrase: DLGADSLDTVELVMA
type: PTM
name: Ppantetheine_attach_site
description: Phosphopantetheine attachment site

phrase: DNIEQRVKKIVAEQLGVAEADIKNESSFVNDLGADSLDTVELVMALEDEFGMEIPDEEAEKITTVQQAIDYARAN
type: DOMAIN
name: PP-bd_ACP
description: Phosphopantetheine binding ACP domain
Protein sequence:
MNNIRNFAIIAHIDHGKSTLADRLIEECNGLEAREMINQILDSMDIERERGITIKAQTVKLNYTANDGNQYCLNLMDTPGHVDFSYEVSRSLAACEGSLLVVDSSQGVEAQTLANVYKAIDNNHEIIVVLNKVDLPAADPEKVKLQVEEVIGIDASESVLISAKTGLGIKDVLEAIVAKLPAPQGDVNAPLQAILVDSWYDTYLGVVILVRVKNGVLKKGMKIVMMSNNATYQIDNIGIFTPKKVMTGELSAGEVGFITASMKEVADCKVGDTITEEKRPCSEALPGFKEVHPVVFCSIFPHKTDDFKYLREALEKLHLNDASFTFEAETSNALGYGFRCGFLGMLHLEVIQERLEREFDLDLTATAPSVIYRVTTRSGEILNIHNPSDMPDPTKIEIVEEPWITATIMVPDQYLGEILSLCEERRGEQEDLSYIGNTTTALLRYKLPLSEVVFDFYDRLKSISKGYASLDWEISSYLVSQIDKLSFLINGEPVDALACIVHKSRAEKRGREICARLKDLIPRQQYKIAIQAAVGGKIIARETINPYRKDVTAKLYGGDVTRRMKLLEKQKKGKKRLHSIGNVNIPQNAFIQALKISD

Annotated regions:
phrase: NIRNFAIIAHIDHGKSTLADRLIEECNGLEAREMINQILDSMDIERERGITIKAQTVKLNYTANDGNQYCLNLMDTPGHVDFSYEVSRSLAACEGSLLVVDSSQGVEAQTLANVYKAIDNNHEIIVVLNKVDLPAADPEKVKLQVEEVIGIDASESVLISAKTGLGIKDVLEAIVAKL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: GVVILVRVKNGVLKKGMKIVMMSNNATYQIDNIGIFTPKKVMTGELSAGEVGFITASMKEVADCKVGDTI
type: DOMAIN
name: EFTu-like_2
description: Translation elongation factor EFTu-like, domain 2

phrase: NNIRNFAIIAHIDHGKSTLADRLIEECNGLEAREMINQILDSMDIERERGITIKAQTVKLNYTANDGNQYCLNLMDTPGHVDFSYEVSRSLAACEGSLLVVDSSQGVEAQTLANVYKAIDNNHEIIVVLNKVDLPAADPEKVKLQVEEVIGIDASESVLISAKTGLGIKDVLEAIVAKLPAP
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: HPVVFCSIFPHKTDDFKYLREALEKLHLNDASFTFEAETSNALGYGFRCGFLGMLHLEVIQERLEREFDLDL
type: DOMAIN
name: EFG_II
description: Elongation Factor G, domain II

phrase: NFAIIAHIDHGKS
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: ERGITIKA
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: NLMDTPGHVD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: RSLAACEGSLL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: IIVVLNKVD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: EPWITATIMVPDQYLGEILSLCEERRGEQEDLSYIGNTTTALLRYKLPLSEVVFDFYDRLKSISKGYASLDWEISSYLVS
type: DOMAIN
name: LepA_IV
description: Elongation factor 4, domain IV

phrase: VEEPWITATIMVPDQYLGEILSLCEERRGEQEDLSYIGNTTTALLRYKLPLSEVVFDFYDRLKSISKGYASLDWEISSYLVSQID
type: DOMAIN
name: EFG_V-like
description: Elongation factor EFG, domain V-like

phrase: RNFAIIAHIDHGKSTLADRLIEECNGLEAREMINQILDSMDIERERGITIKAQTVKLNYTANDGNQYCLNLMDTPGHVDFSYEVSRSLAACEGSLLVVDSSQGVEAQTLANVYKAIDNNHEIIVVLNKVDLPAADPEKVKLQVEEVIGIDASESVLISAKTGLGIKDVL
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: INGEPVDALACIVHKSRAEKRGREICARLKDLIPRQQYKIAIQAAVGGKIIARETINPYRKDVTAKLYGGDVTRRMKLLEKQKKGKKRLHSIGNVNIPQNAFIQAL
type: DOMAIN
name: LepA_CTD
description: GTP-binding protein LepA, C-terminal

phrase: DSMDIERERGITIKA
type: CONSERVED_SITE
name: G_TR_CS
description: Tr-type G domain, conserved site
Protein sequence:
MERYESLFAQLKERKEGAFVPFVTLGDPGIEQSLKIIDTLIEAGADALELGIPFSDPLADGPTIQNATLRAFAAGVTPAQCFEMLALIRQKHPTIPIGLLMYANLVFSKGIDEFYAQCEKVGVDSVLVADVPVEESAPFRQAALRHNVAPIFICPPNADDDLLRQIASYGRGYTYLLSRAGVTGAENRAALPLNHLVTKLKEYNAAPPLQGFGISAPDQVKAAIDAGAAGAISGSAIVKIIEQHINEPEKMLVALKAFVQPMKAATRS

Annotated regions:
phrase: LELGIPFSDPLAD
type: ACTIVE_SITE
name: Trp_synthase_alpha_AS
description: Tryptophan synthase, alpha chain, active site
Protein sequence:
MAKKVAVIGAGVSGLISLKCCVDEGLEPTCFERTEDIGGVWRFKEKVEDGRASIYQSVVTNTSKEMSCFSDFPMPEDFPNFLHNSKLLEYFRIFAKKFDLLKYIQFQTTVLSVRKCPDFSSSGQWKVVTQSNGKEQSAVFDAVMVCTGHHFLPHIPLKSFPGIERFKGQYFHSRQYKHPDGFEGKRILVIGMGNSGSDIAVELSKSAAQVFISTRHGTWVMSRVSEDGYPWDSVFHTRFRSMLRNVLPRTVVKWMIEQQMNQWFNHENYGLEPQNKYIMKEPVLNDDVPSRLLCGAIKVKSTVKELTETSAIFEDGTVEENIDVIIFATGYSFSFPFLEDSLVKVENNMVSLYKYIFPAHLEKSTFACIGLIQPLGSIFPTAELQARWVTRVFKGLCHLPSERTMMMDIIKRNEKRIDLFGESQSQTLQTNYVDYLDELALEIGAKPDFCSLLFKDPKLAVRLFFGPCNSYQYRLAGPGQWEGARSAIFTQKQRILKPLKTRVLKDSSNFPVSFLLKILGLVAVVVAFFCQLQWS

Annotated regions:
Protein sequence:
MSPFAPLASGILLLLWLTAPSRACTCVPPHPQTAFCSSDLVIRAKFVGAPEFNQTASYKRYEIKMTKMFKGFNALGDAPDIRFIYTPAMESVCGYFHRSQNRSQEFLIAGQLWNGHLHITTCSFVAPWNSLSSAQRQGFTEIYAAGCEECTVFPCTSIPCKLQSDTHCLWTDQLLTGSDKGFQSRHLACMPREPGMCTWQSLRPRVA

Annotated regions:
phrase: CTCVPPHPQTAFCSSDLVIRAKFVGAPEFNQTASYKRYEIKMTKMFKGFNALGDAPDIRFIYTPAMESVCGYFHRSQNRSQEFLIAGQLWNGHLHITTCSFVAPWNSLSSAQRQGFTEIYAAG
type: DOMAIN
name: Netrin_domain
description: Netrin domain

phrase: CTCVPPHPQTAF
type: CONSERVED_SITE
name: TIMP_CS
description: Tissue inhibitor of metalloproteinase, conserved site
Protein sequence:
MILELKNISKTYPSGRRALQSISFKIEEGEILAIIGLSGAGKSTMLRCINRLVEPDEGEVIFLGEKINKLKGKKLRQYRSKIGMIFQNYNLVERLNAVENVLHGCLGSIPSYRGALGLYTEEEKEKAFALLQTVGMEEFAFQRCSELSGGQKQRIGIARALMQSPKLLLCDEPIASLDPQSSETVLNYIKEFAVNKNIACLISLHQMEAAKKYADRIIALNNGKIVFDGIPDSLNDEVLHKEIFTNVSIDSGEKSL

Annotated regions:
phrase: LELKNISKTYPSGRRALQSISFKIEEGEILAIIGLSGAGKSTMLRCINRLVEPDEGEVIFLGEKINKLKGKKLRQYRSKIGMIFQNYNLVERLNAVENVLHGCLGSIPSYRGALGLYTEEEKEKAFALLQTVGMEEFAFQRCSELSGGQKQRIGIARALMQSPKLLLCDEPIASLDPQSSETVLNYIKEFAVNKNIACLISLHQMEAAKKYADRIIALNNGKIVFDGIPDSLNDEVLHKEIFTN
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: EGEILAIIGLSGAGKSTMLRCINRLVEPDEGEVIFLGEKINKLKGKKLRQYRSKIGMIFQNYNLVERLNAVENVLHGCLGSIPSYRGALGLYTEEEKEKAFALLQTVGMEEFAFQRCSELSGGQKQRIGIARALMQSPKLLLCDEPIASLDPQSSETVLNYIKEFAVNKNIACLISLHQMEAAKKYADRIIALNNGKIVFDGIPDSLNDEVLHKEIFTNV
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LQSISFKIEEGEILAIIGLSGAGKSTMLRCINRLVEPDEGEVIFLGEKINKLKGKKLRQYRSKIGMIFQNYNLVERLNAVENVLHGCLGSIPSYRGALGLYTEEEKEKAFALLQTVGMEEFAFQRCSELSGGQKQRIGIARALMQSPKLLLCDEPI
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: LSGGQKQRIGIARA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site
Protein sequence:
MSNFTAKVPLSERMADVLISKDRWKDDEEGYLKVKYGLEIILINVMKFALVYGIALVTGLLLQTVTVHLSYLWLRRYSFGLHATKTLNCTLISLLMFVLAPFVFQNIPSNNWIVLGTFGFILLNMFLFAPADTESLPLIGEEHRKTLKRKAMIGTLILTGIALLIPFAEMKTLIMVGSLFQVISINPLTYKLLKRRYRNYEKYE

Annotated regions:
Protein sequence:
MGEEESSMAQLGSVALNGSTPKKVAYFYDSDIGNYAYVTGHPMKPHRIRLAHSLIMQYNLYQKMEIYRAKPATRGEMTQFHTDDYIDFLQKVTPDNMDSYMREQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRQKCDIAVNWAGGLHHAKKCEASGFCYVNDIVLGILELLRFMKRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGELRDIGIGQGKHYSVNYPLRDGITDESYRSIFEPVIENVMKYYQPEAVVLQCGGDSLSGDRLGCFNLSMDGHANCVNYVKSFGLPTLVLGGGGYTMRNVARTWAFETGVLVGQEMERTLPYNEYYEYYAPDFELNVRSSNMENSNSREYLEKITAAVIDNLRNTGPVPSVQMQDVPRKPFGGMTDEEEAELDDLDEDENKDVRMTEHRWDKRIENGAEFEPIDDDELARANGATRQSSNKRTFTDFSKGGEEEATGNSDGAINGKSAEANAEDNHDTNDDTIEEIVATEQDKERVEETTEETADKQTIDGDGDVGMADSAPIEEEAKIKEEEPETQNAPAPAAATAATGDVEKSADDSASQDNEGRPPKDQEKPTGEESKSEKVEIKDKEEQPADAMDIDGDKEKEADLATSSS

Annotated regions:
phrase: HPMKPHRIRLAHSLIMQYNLYQKMEIYRAKPATRGEMTQFHTDDYIDFLQKVTPDNMDSYMREQGKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLNRQKCDIAVNWAGGLHHAKKCEASGFCYVNDIVLGILELLRFMKRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKYGEYFPGTGELRDIGIGQGKHYSVNYPLRDGITDESYRSIFEPVIENVMKYYQPEAVVLQCGGDSLSGDRLGCFNLSMDGHANCVNYVKSFGLPTLVLGGGGYTMRNVARTWAFE
type: DOMAIN
name: His_deacetylse_dom
description: Histone deacetylase domain
Protein sequence:
MEVITSIKEAKQTVKNWKSHNLSIGYVPTMGFLHDGHLSLVKNAKTQDKVIVSIFVNPMQFGPNEDFSSYPRDLERDIKMCQDNGVDMVFIPDAAQMYLKNFSTYVDMNTITDKLCGAKRLGHFRGVCTVLAKFFNILNPDIVYMGQKDAQQCVVVRHMVDDLNFDLKIQICPIIREEDGLAKSSRNVYLSEEERKASLAISQSIFLAEKLVQEGEKDTSKIIQAMKDILEKEKLIKIDYIELVDFNTMENIKNIADNVLGAVAAFVGKTRLIDNFLVQGLK

Annotated regions:
phrase: YVPTMGFLHDGHLSLVKNAKTQDKVIVSIFVNPMQFGPNEDFSSYPRDLERDIKMC
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain
Protein sequence:
MHFVDEAFNEVFAGNGGHGIVAFRREKYVAFGGPAGGNGGNGGSVIFVGDKGENTLLKLKYQKHLKAPHGINGKNKGQNGANAPHLYVKVPLGTVFYTADNKFLGEILYDQQTLVIAKGGKGGKGNKALATFKNQAPSYSEKGDLGESFKIKTELKVLADIGLLGFPSVGKSSLISAISKAQPKVASYPFTTIKPHLGVVEVDGFSFVVADLPGLIENAHLGCGMGIQFLKHIERCRVLVHILSMESSNPYQDFQTLNQELKQYNPQLLLKKQIIVTNKMDLPDSLKKLTLLKQKIKGQPIIPLSLVSFDNLEILKYKMSSFLQNTPLEVNPNNNNDFKLYTLTDNLKTISVIKESDSVFVVSGNQVEIFFHRTDFNNEESVKRFNRILKKIGMEEQLQKKGAKPGDQVKICDRLFDFL

Annotated regions:
phrase: TLTDNLKTISVIKESDSVFVVSGNQVEIFFHRTDFNNEESVKRFNRILKKIGMEEQLQKKGAKPGDQVKICDRLFDF
type: DOMAIN
name: OCT_dom
description: GTP-binding protein OBG, C-terminal

phrase: ADIGLLGFPSVGKSSLISAISKAQPKVASYPFTTIKPHLGVVEVDGFSFVVADLPGLIENAHLGCGMGIQFLKHIERCRVLVHILSMESSNPYQDFQTLNQELKQYNPQLLLKKQIIVTNKMDLPDSLKKLTLLKQKIKGQPIIPLSLVSFDNLEILKYKMSSFL
type: DOMAIN
name: G_OBG
description: OBG-type guanine nucleotide-binding (G) domain

phrase: DLPGLIENAHLGC
type: CONSERVED_SITE
name: GTP1-OBG_CS
description: GTP1/OBG, conserved site

phrase: MHFVDEAFNEVFAGNGGHGIVAFRREKYVAFGGPAGGNGGNGGSVIFVGDKGENTLLKLKYQKHLKAPHGINGKNKGQNGANAPHLYVKVPLGTVFYTADNKFLGEILYDQQTLVIAKGGKGGKGNKALATFKNQAPSYSEKGDLGESFKIKTELKV
type: DOMAIN
name: GTP1_OBG_dom
description: GTP1/OBG domain

phrase: VDEAFNEVFAGNGGHGIVAFRREKYVAFGGPAGGNGGNGGSVIFVGDKGENTLLKLKYQKHLKAPHGINGKNKGQNGANAPHLYVKVPLGTVFYTADNKFLGEILYDQQTLVIAKGGKGGKGNKALATFKNQAPSYSEKGDLGESFKIKTELK
type: DOMAIN
name: GTP1_OBG_dom
description: GTP1/OBG domain

phrase: ADIGLLGFPSVGKSSLISAISKAQPKVASYPFTTIKPHLGVVEVDGFSFVVADLPGLIENAHLGCGMGIQFLKHIERCRVLVHILSMESSNPYQDFQTLNQELKQYNPQLLLKKQIIVTNKMDLPDSLKKLTLLKQKIKGQPIIPLSLVSFDNLEILKYKMSSF
type: DOMAIN
name: G_OBG
description: OBG-type guanine nucleotide-binding (G) domain

phrase: IGLLGFPSVGKSSLISAISK
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: QPKVASYPFTTIKPHLGV
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: VADLPGLIENAHLGC
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: GIQFLKHIERCRVLVHIL
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: DIGLLGFPSVGKSSLISAISKAQPKVASYPFTTIKPHLGVVEVDGFSFVVADLPGLIENAHLGCGMGIQFLKHIERCRVLVHILSMESSNPYQDFQTLNQELKQYNPQLLLKKQIIVTNKMDLPDSLKKLTLLKQKIKGQPIIPLSLVSFDNLEIL
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: IGLLGFPSVGKSSLISAISKAQPKVASYPFTTIKPHLGVVEVDGFSFVVADLPGLIENAHLGCGMGIQFLKHIERCRVLVHILSMESSNPYQDFQTLNQELKQYNPQLLLKKQIIVTN
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: IKESDSVFVVSGNQVEIFFHRTDFNNEESVKRFNRILKKIGMEEQLQKKGAKPGDQVKICDRLFD
type: DOMAIN
name: OCT_dom
description: GTP-binding protein OBG, C-terminal

phrase: SVIKESDSVFVVSGNQVEIFFHRTDFNNEESVKRFNRILKKIGMEEQLQKKGAKPGDQVKICDRLFD
type: DOMAIN
name: OCT_dom
description: GTP-binding protein OBG, C-terminal
Protein sequence:
MLCPPDVAFEKRHFKRRDGNKVVPPSIALVAGLESGFLFKLSAVEDVARRGQFPGLLTEDGFLLMCEESEHIRDAYAMAKHLVALAPDGIFTRATLQEAAGKVGSTQDTLSVEEVDALFNALDSDNRGYVSVDEFMDALYGEEGREAMREIRREYMRRKIEVEGEPSWRMRPTPKPTRKLRQKRKREQGQKRKQGQRQKQEQGQRQKREQGQRQKQEQGQKRKRERGGAQRPPPPKQKAGCGC

Annotated regions:
phrase: PDGIFTRATLQEAAGKVGSTQDTLSVEEVDALFNALDSDNRGYVSVDEFMDAL
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: LSVEEVDALFNALDSDNRGYVSVDEFMDALYGEEG
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain
Protein sequence:
MAYTVSSANQLVYLGSVWADPLELQNLCTSALGNQFQTQQARTTVQQQFSDVWKTIPTATVRFPATGFKVFRYNAVLDSLVSALLGAFDTRNRIIEVENPQNPTTAETLDATKRVDDATVAIRASISNLMNELIRGTGMYNQALFEMASGFTWATIPYT

Annotated regions:
Protein sequence:
MKTDDKDREGGDSHGAIGAKLMEYALKVRKVFVTGGVDEKMAKDVVQQLHILASISDDPIYMFVNSPGGHVESGDMIFDAIRFITPKVIMIGSGSVASAGALIYAAADKENRYSLPNTRFLLHQPSGGIQGPASNIEIYRREIVRMKERLDRIFAEATGQTPEKISADTERDFWLNAEEAVQYGLVNKIIVSEREITLPGQ

Annotated regions:
phrase: RYSLPNTRFLLHQ
type: ACTIVE_SITE
name: ClpP_His_AS
description: ClpP, histidine active site
Protein sequence:
MEKQKKSINIYILSDSVGDTGDQVAHAAAAQFLDVEFNFARHPFIHTISLLDSILNKAVREDAMVFSTFVNPELNQYAADFCNQNTLKYLDVLTPAVNLFAEKTNLAPENKPGRTHSLNAKYFDKISAMEFAVTYDDGKDPAGFLKADIVLLGVSRTSKTPLSLYLANKGYKVANLPLVPQTQIPDEIWQVDSNKIFGLTTTKEVLNNIRRQRMIAYGLNPESSYSNMDSINKELQSADELFKKIGCLVINTANKSIEETATIIMESLV

Annotated regions:
Protein sequence:
MSRRLARETALQVLFQLEMTGESQDLKSAIHKWADEFAVPEGSIPFAEELAEGTLTHKEVIDENLEKLSEGWSLARMANVDRNLLRLASYEILFRKDIPGRVTINEAIEIAKRYGSEESGKFINGILDKVVESVNKKDEKGNDTLSRD

Annotated regions:
phrase: ARETALQVLFQLEMTGESQDLKSAIHKWADEFAVPEGSIPFAEELAEGTLTHKEVIDENLEKLSEGWSLARMANVDRNLLRLASYEILFRKDIPGRVTINEAIEIAKRYGSEESGKFINGILDKV
type: DOMAIN
name: NusB_RsmB_TIM44
description: NusB/RsmB/TIM44
Protein sequence:
MSSGQSVLKQLHPLIRPYAETVLRKGNVGVCMGNLRISDVKSGRPTLTQTKEPCGDRFKIYIPFAGDSLKWEVIFDSCQPSNPPDFIFLGENGNFDPDIEKLENLTHWDPKNPESLVLAIEDLMREYRCYQKQLIEGYSRLQFEYSSLQGMEACDDVEVHMGNRLPGTLDSPVNFLIRLPIDLSPIPQYLVKDDPGEDLAVLLAKFHNSEGSRVTPQLFLSPKVEHALGDNTALRIPRFPTGGCLMDYVPQVQDFLQKQIDHIVEGYQRRREYVAAFISRFGGSVLEYDAESFTKLSLVLEWNEFFFVLHIELPSRFPQDMPVFTFQSCYHLSKTNGEPYVSVQKSYPYSPRWTGEEMAHRAKLFILDFIPQFKKVSVSSNKL

Annotated regions:
Protein sequence:
MSNKDICVKISGSKKIREAREKVKSDTLYNLTNAVAQLKSASYVKFDPTLEIVMKLGIDPRHSDQIVRGVVNLPAGTGKTIRVAVICKEEREEEAKSAGADLVGSINIIDEIKAGQINFDVCIATPDMMSMISSVARILGPKGLMPNPKLGTVTLDIKNAIKNAKSGQVEYRAEKAGIIHAGLGKLSFSDQDLLKNLNAFIGAVIKAKPVGLKGNYLKAIYLSSTMGASVQIDLTSIS

Annotated regions:
phrase: MSMISSVARILGPKGLMP
type: CONSERVED_SITE
name: Ribosomal_uL1_CS
description: Large ribosomal subunit protein uL1, conserved site
Protein sequence:
MRQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRNDDEPAEMLSIADVDIDVPAHKVTRNGEHISLTPLEFDLLVALARKPRQVFTRDVLLEQVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGPP

Annotated regions:
phrase: RILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRAR
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: AEMLSIADVDIDVPAHKVTRNGEHISLTPLEFDLLVALARKPRQVFTRDVLLEQVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAG
type: DOMAIN
name: OmpR/PhoB-type_DNA-bd
description: OmpR/PhoB-type DNA-binding domain

phrase: ILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARV
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: IDVPAHKVTRNGEHISLTPLEFDLLVALARKPRQVFTRDVLLEQVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGY
type: DOMAIN
name: OmpR/PhoB-type_DNA-bd
description: OmpR/PhoB-type DNA-binding domain

phrase: QRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPK
type: DOMAIN
name: MtrA_REC
description: MtrA, receiver domain

phrase: GEHISLTPLEFDLLVALARKPRQVFTRDVLLEQVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGY
type: DOMAIN
name: OmpR/PhoB-type_DNA-bd
description: OmpR/PhoB-type DNA-binding domain

phrase: GEHISLTPLEFDLLVALARKPRQVFTRDVLLEQVWGYRHPADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYK
type: DOMAIN
name: OmpR/PhoB-type_DNA-bd
description: OmpR/PhoB-type DNA-binding domain

phrase: QRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRADSGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVAR
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain
Protein sequence:
MLTKDLSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFFIANEVSPRFDHLTKEDTGFIGFKNMEQIAEHPLEENLAAIRRLKQDYPDKVLIASIMGENEQQWQELARLVEEAGADMIECNFSCPQMTSHAMGSDVGQSPELVEKYCRAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVVNGKSSISGYSGKAVKPIALRFIQQLRMHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGLSHYLADQGFASLQEMIGLANGNIIPAEDLDRSYIVYPRINQEKCVGCGRCYISCYDGGHQAMEWDEHSRTPHCNTEKCVGCLLCGHVCPVACIDLGEVKFKKGEKEHALTL

Annotated regions:
phrase: CVGCLLCGHVC
type: CONSERVED_SITE
name: 4Fe4S_Fe_S_CS
description: 4Fe-4S ferredoxin, iron-sulphur binding, conserved site

phrase: RTPHCNTEKCVGCLLCGHVCPVACIDLGE
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: VYPRINQEKCVGCGRCYISCYDGGHQAMEWDE
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: LSVTFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGIVFKTIGFFIANEVSPRFDHLTKEDTGFIGFKNMEQIAEHPLEENLAAIRRLKQDYPDKVLIASIMGENEQQWQELARLVEEAGADMIECNFSCPQMTSHAMGSDVGQSPELVEKYCRAVKRGSSLPMLAKMTPNIGDMCEVALAAKRGGADGIATINTVKSITNIDLNRKIGMPVVNGKSSISGYSGKAVKPIALRFIQQLRMHPELRDFPISGIGGIETWEDAAEFLLLGAATLQVTTGIMQYGYRIVEDMASGLSHY
type: DOMAIN
name: Dihydroorotate_DH_cat
description: Dihydroorotate dehydrogenase, catalytic
Protein sequence:
MSIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEGVTAKEIANKYHEEFQRCFRDLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKTVEQAYCKTCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKTCKLCGSTPSVEETEHFYFALHTFQQQIKKVVEIAKEKGTWRDNAIQLTERYVKEGLQDRVVSRDLPIGVPIPVKGYEDKKIYVWIEAVAGYYSASKYWAEETGKDDHEFWNSDAQTYYVHGKDNIPFHSIIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFLTVNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRTLKFIEKYYDGIVPQGTINVELKDKVEGLYKNVGEAIEQTTFKVALETIFDAVRFANKYFDERQPWKEREDNPVSCEETIYNCIYLIANFANLLEPFLPFSSERVRSTLSIVNRNWEPQNTLPNRIDSVQPLFERIDVKQIEHEIEKLYGAAK

Annotated regions:
phrase: PYANGSLHLGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: IFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEGVTAKEIANKYHEEFQRCFRDLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKTVEQAYCKTCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKTCKLCGSTPSVEETEHFYFALHTFQQQIKKVVEIAKEKGTWRDNAIQLTERYVKEGLQDRVVSRDLPIGVPIPVKGYEDKKIYVWIEAVAGYYSASKYWAEETGKDDHEFWNSDAQTYYVHGKDNIPFHSIIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFLTVNAPENRDTD
type: DOMAIN
name: MetRS_core
description: Methioninyl-tRNA synthetase core domain

phrase: HNSELLGAYGNFVNRTLKFIEKYYDGIVPQGTINVELKDKVEGLYKNVGEAIEQTTFKVALETIFDAVRFANKYFDERQPWKEREDNPVSCEETIYNCIYLIANFANLLEPFLPFSSERVRST
type: DOMAIN
name: Anticodon_Met
description: Methionyl-tRNA synthetase, anticodon-binding domain

phrase: IGGAWPYANGSLH
type: DOMAIN
name: MetRS_core
description: Methioninyl-tRNA synthetase core domain

phrase: KGENVLYVSGSDCN
type: DOMAIN
name: MetRS_core
description: Methioninyl-tRNA synthetase core domain

phrase: FTYDCYTRTDS
type: DOMAIN
name: MetRS_core
description: Methioninyl-tRNA synthetase core domain

phrase: IYVWIEAVAGY
type: DOMAIN
name: MetRS_core
description: Methioninyl-tRNA synthetase core domain

phrase: YVHGKDNIPFHSIIW
type: DOMAIN
name: MetRS_core
description: Methioninyl-tRNA synthetase core domain

phrase: ELLGAYGNFVN
type: DOMAIN
name: MetRS_core
description: Methioninyl-tRNA synthetase core domain

phrase: FIGGAWPYANGSLHLGHIASLLPGDILARYYRAKGENVLYVSGSDCNGTPIAIRAKQEGVTAKEIANKYHEEFQRCFRDLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKTVEQAYCKTCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKTCKLCGSTPSVEETEHFYFALHTFQQQIKKVVEIAKEKGTWRDNAIQLTERYVKEGLQDRVVSRDLPIGVPIPVKGYEDKKIYVWIEAVAGYYSASKYWAEETGKDDHEFWNSDAQTYYVHGKDNIPFHSIIWPAVLLGIGEEAIPRHIVSNEYLTVEKRKLSTSKNWAVWVPDILERYNPDSIRYFLTVNAPENRDTDFSWREFIYSHNSELLGAYGNFVNRT
type: DOMAIN
name: Methionyl/Leucyl_tRNA_Synth
description: Methionyl/Leucyl tRNA synthetase

phrase: KVEGLYKNVGEAIEQTTFKVALETIFDAVRFANKYFDERQPWKEREDNPVSCEETIYNCIYLIANFANLLEPFLPFSSERVRSTLSIVNRNWEPQNT
type: DOMAIN
name: M/V/L/I-tRNA-synth_anticd-bd
description: Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
Protein sequence:
MSQIQTRTEPMVINMGPHHPSMHGVLRLIVTLDGEDVIDCEPVIGYLHRGMEKIAENRTNTMFVPYVSRWDYAAGMFNEAVTVNAPEQLADIAVPKRASYIRVIMLELNRIANHLLWLGPFLADVGAQTPFFYIFREREMIYDLWEAATGYRMVNNNYFRIGGVAADLPYGWVDKCEDFCDYFLPKVDEYERLITNNPIFRRRIMGLGVISREEAINWGLSGPMLRASGVKWDLRKVDHYECYDDFDWEVHWEKDGDCLARYLVRIREMRESVNIIRQAIKGLPGGPYENLEAKRMAEGPKSEWNDFDYQFLGKKIPPTFKIPKGEHYVRIESGKGEIGIYIIGDNNIFPWRFKIRAADFVNLQIFPHILQGAKVADLVAILGSIDIIMGSVDR

Annotated regions:
phrase: DVGAQTPFFYIFREREMIYDLWEAATGYRMVNNNYFRIGGVAADLPYGWVDKCEDFCDYFLPKVDEYERLITNNPIFRRRIMGLGVISREEAINWGLSGPMLRASGVKWDLRKVDHYECYDDFDWEVHWEKDGDCLARYLVRIREMRESVNIIRQAIKGLPGGPYENLEAKRMAEGPKSEWNDFDYQFLGKKIPPTFKIPKGEHYVRIESGKGEIGIYIIGDNNIFPWRFKIRAADFVNLQIFPHILQGAKVADLVAILGSIDIIMGSVD
type: DOMAIN
name: NADH_Q_OxRdtase_suD
description: NADH-quinone oxidoreductase, subunit D

phrase: LHRGMEKIAEN
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_49kDa_CS
description: NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site
Protein sequence:
MSKPSVLKGCLESLVALEKTKRIPKKPSCDASPLISNFENWSGKPRKLYLRDARSMKRQGLPYELNSNMFAQLLASPMRLDKITRVRAPKELLVQIKLRKADTDISAARGKPFELRPSFGMERGHPTSYVSNSVALVHKYASSAMKWLPSSANSTIRHINQADVATQPEWYSQAYTEQMLGSLREALSSTLMHLGKAPESDPRDVIIVCNPQLPAISLRKSENPFIALATTVLNLYPIKDPELEKVVNNRDIELCSSKHRSLCFLIYRLLAFQADRII

Annotated regions:
Protein sequence:
MGVKGLNQLIKEHAPEAFREFQLKNLFGRKVAIDASMCLYQYLIAVRQSDGQQLTSEDGETTSHLSGMFYRTIRLVENGIKPMYVFDGKPPVLKGGELEKRMIRKKEALKQQEDIKDTATVEEMVRYEKRSVRVTKEQNNEAKKLLELMGIPYVDAPCEAEAQCAELAVAGKVFAAASEDMDTLCYSPPYLLRHLTFAEARKMPIDQIDYKKAMEGLEMDKQTFIDLCILLGCDYCETIKGVGPVTAFKLIKEHGSLDNIVKWIEENPDSTKFKVPENWPYAEARELFLNPDVSPGKEINLKWQEPKVDELVEFMVKQKGFSEDRVRSGAEKLKKGLKGGVQGRLDGFFSVVKTEKRKPEQDKKTKGSKKAKKK

Annotated regions:
phrase: MGVKGLNQLIKEHAPEAFREFQLKNLFGRKVAIDASMCLYQYLIAVRQSDGQQLTSEDGETTSHLSGMFYRTIRLVENGIKPMYVFDGKPPVLKGGELEKRMIRKKE
type: DOMAIN
name: XPG_DNA_repair_N
description: XPG, N-terminal

phrase: KQTFIDLCILLGCDYCETIKGVGPVTAFKLIKE
type: CONSERVED_SITE
name: HhH2
description: Helix-hairpin-helix motif, class 2

phrase: ELMGIPYVDAPCEAEAQCAELAVAGKVFAAASEDMDTLCYSPPYLLRHLTFAEARKMPIDQIDYKKAMEGLE
type: DOMAIN
name: XPG-I_dom
description: XPG-I domain

phrase: GIPYVDAPCEAEAQCAELAVAGKVFAAASEDMDTLCYSPPYLLRHLTFAEARKMPIDQIDYKKAMEGLEMDKQTFIDLCILLGC
type: DOMAIN
name: XPG-I_dom
description: XPG-I domain

phrase: GIPYVDAPCEAEAQ
type: CONSERVED_SITE
name: XPG_CS
description: XPG conserved site

phrase: MGVKGLNQLIKEHAPEAFREFQLKNLFGRKVAIDASMCLYQYLIAVRQSDGQQLTSEDGETTSHLSGMFYRTIRLVENGIKPMYVFDGKPPVLKGGELEKRMIRKKE
type: DOMAIN
name: XPG_DNA_repair_N
description: XPG, N-terminal

phrase: IKPMYVFDGKPPVL
type: CONSERVED_SITE
name: XPG_CS
description: XPG conserved site
Protein sequence:
MKIIAKKDLFINDEIRVREVRLVGLEGEQLGIKPLSEAQAIADDANVDLVLIQPQATPPVAKIMDYGKFKFEYQKKQKEQRKKQSVVTVKEVRLSPVIDKGDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIAIIEQRAKMDGRQMFMQLAPIPDKK

Annotated regions:
phrase: INDEIRVREVRLVGLEGEQLGIKPLSEAQAIADDANVDLVLIQPQATPPVAKIMDYGKFKFEYQKKQKE
type: DOMAIN
name: Translation_initiation_fac_3_N
description: Translation initiation factor 3, N-terminal

phrase: KIMDYGKFKFEYQ
type: CONSERVED_SITE
name: Translation_initiation_fac3_CS
description: Translation initiation factor 3, conserved site

phrase: VTVKEVRLSPVIDKGDFETKLRNGRKFLEKGNKVKVSIRFKGRMITHKEIGAKVLAEFAEATQDIAIIEQRAKMDGRQMFMQLA
type: DOMAIN
name: Translation_initiation_fac_3_C
description: Translation initiation factor 3, C-terminal