nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MDSKSGRSESAINIPESNSTKHKSTVVHTATKVAAVAPRGGGWRRGVSIFDFILRICALAAALAATATMGTTDQTLPFFTQFFQFQASYDDLPAFTFFVVANGIASGYLVLSLPFSIATIVRPHAAAIKLLLIIFDTVMVAFTAAAAAAAAAIVYLAHNGNSKTNWFAICQQFNDFCQRVSGAVVASFVAAVILIFLVVLSAVAIRKH

Annotated regions:
phrase: RGVSIFDFILRICALAAALAATATMGTTDQTLPFFTQFFQFQASYDDLPAFTFFVVANGIASGYLVLSLPFSIATIVRPHAAAIKLLLIIFDTVMVAFTAAAAAAAAAIVYLAHNGNSKTNWFAICQQFNDFCQRVSGAVVASFVAA
type: DOMAIN
name: CASP_dom
description: Casparian strip membrane protein domain
Protein sequence:
MLKPLGDRIVIEVVETEEKTASGIVLPDTAKEKPQEGRVVAVGAGRVLDNGQRIGRKSKVGDRVIFSKYAGTEVKYDGKEYLILRESDILAVIR

Annotated regions:
phrase: LKPLGDRIVIEVVETEEKTASGIV
type: CONSERVED_SITE
name: Chaprnonin_Cpn10_CS
description: Chaperonin GroES, conserved site
Protein sequence:
MLLEVGSNIMKFYEYLLRRTDGRVKDYPLMQSPVQMTLILLGYLFFVLYAGPRLMANRKPFQLTSAMIIYNFSMVVLNAFIVYEFMMSGWATTYTWRCDICDYSDSPEALRMVRVAWLFYFSKFIELMDTVFFVLRKKHSQITFLHIFHHSFMPWTWWWGVTLAPGGMGSFHAMVNAAVHVIMYFYYGLSAAGPRFQKFLWWKKYMTAIQLIQFVLVSVHVSQYYFMKKCDYQVPLFIHLIWIYGTFFFVLFSNFWIQAYVRGKRLPKPVSHQNGVKAECPVAANSKHLENGTLAHGNGSTQNGKVKEV

Annotated regions:
Protein sequence:
MKQKLKTKSGAKKRFRFSKTGKVKFAHAFGSHKFLSKRPDTKRKYRKARIADDTNMLEMPRLMPYGR

Annotated regions:
phrase: KTKSGAKKRFRFSKTGKVKFAHAFGS
type: CONSERVED_SITE
name: Ribosomal_bL35_CS
description: Large ribosomal subunit protein bL35, conserved site
Protein sequence:
MDPKAEGNGENITETAAGNVETSDFVNLKRQKREGVNSTGMSEIDMTGSQETPEHNMHGSPTHTDDLGPRLDADMLDSQSSHVSSSAQGNRSEVENELSNLFAKMALPGHDRRTDEYILVRQTGQDKFAGTTKCNLDHLPTKAEFNASCRLYRDGVGNYYPPPLAFERIDIPEQLAAQLHNLEPREQSKQCFQYKLEVWNRAHAEMGITGTDIFYQTDKNIKLDRNYKLRPEDRYIQTEKYGRREIQKRYEHQFQAGSLLPDILIKTPQNDIHFSYRFAGDAYANKRFEEFERAIKTKYGSDTEIKLKSKSGIMHDSKYLESWERGSADIRFAEFAGENRAHNKQFPAATVNMGRQPDGQGGMTRDRHVSVDYLLQNLPNSPWTQALKEGKLWDRVQVLARDGNRYMSPSRLEYSDPEHFTQLMDQVGLPVSMGRQSHANSVKFEQFDRQAAVIVADGPNLREVPDLSPEKLQQLSQKDVLIADRNEKGQRTGTYTNVVEYERLMMKLPSDAAQLLAEPSDRYSRAFVRPEPALPPISDSRRTYESRPRGPTVNSL

Annotated regions:
Protein sequence:
MTSTEEKTTSGRVVRITGPVVDVEFPRGSVPELFNALHADITYKELSKTLTLEVAQHLGDNLVRTISMQPTDGLVRGVEVTDTGNSISVPVGDGVKGHVFNALGDCLDEPGYGKDFEHWSIHRKPPPFSELEPRTEMLETGLKVVDLLTPYVRGGKIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELEDANVLKDTALVFGQMDEPPGTRMRVALSALTMAEFFRDEQQQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSTRGRSITSMQAVYVPADDYTDPAPATTFAHLDATTELSRTVFSKGIFPAVDPLASSSTILDPAVVGDEHYRVAQEVIRILQRYKDLQDIIAILGIDELAEEDKQLVQRARRLERFLSQNMMAAEQFTGQPGSTVPLKETIEAFDKLTKGEFDHLPEQAFFLIGGLDDLAKKAESLGAKL

Annotated regions:
phrase: AVVGDEHYRVAQEVIRILQRYKDLQDIIAILGIDELAEEDKQLVQRARRLERFLSQNMMAAEQFTGQPGSTVPLKETIEAFDKLT
type: DOMAIN
name: ATP-synt_VA_C
description: ATP synthase A/B type, C-terminal domain

phrase: PAVDPLASS
type: ACTIVE_SITE
name: ATPase_a/bsu_AS
description: ATPase, alpha/beta subunit, nucleotide-binding domain, active site

phrase: GLKVVDLLTPYVRGGKIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELEDANVLKDTALVFGQMDEPPGTRMRVALSALTMAEFFRDEQQQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSTRGRSITSMQAVYVPADDYTDPAPATTFAHLDATTELSRTVFSKGIFPAVDPLASS
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_nucl-bd
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain

phrase: RGGKIALFGGAGVGKTVLIQEMINRIARNFGGTSVFAGVGERTREGNDLWVELEDANVLKDTALVFGQMDEPPGTRMRVALSALTMAEFFRDEQQQDVLLFIDNIFRFTQAGSEVSTLLGRMPSAVGYQPTLADEMGELQERITSTRGRSITSMQAVYVPADDYTDPAPATTFAHLDATTELSRTV
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VVRITGPVVDVEFPRGSVPELFNALHADITYKELSKTLTLEVAQHLGDNLVRTISMQPTDGLVRGVEVTDT
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_N
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain
Protein sequence:
MSINRNLLNIIIILCICLNLGCNDGAQERETDSHTIQVSSLLPSSSSSCVLSPRASTTKSSLHVTHRHGTCSRLNNGKATSPDHVEILRLDQARVNSIHSKLSKKLATDHVSESKSTDLPAKDGSTLGSGNYIVTVGLGTPKNDLSLIFDTGSDLTWTQCQPCVRTCYDQKEPIFNPSKSTSYYNVSCSSAACGSLSSATGNAGSCSASNCIYGIQYGDQSFSVGFLAKEKFTLTNSDVFDGVYFGCGENNQGLFTGVAGLLGLGRDKLSFPSQTATAYNKIFSYCLPSSASYTGHLTFGSAGISRSVKFTPISTITDGTSFYGLNIVAITVGGQKLPIPSTVFSTPGALIDSGTVITRLPPKAYAALRSSFKAKMSKYPTTSGVSILDTCFDLSGFKTVTIPKVAFSFSGGAVVELGSKGIFYVFKISQVCLAFAGNSDDSNAAIFGNVQQQTLEVVYDGAGGRVGFAPNGCS

Annotated regions:
phrase: NYIVTVGLGTPKNDLSLIFDTGSDLTWTQCQPCVRTCYDQKEPIFNPSKSTSYYNVSCSSAACGSLSSATGNAGSCSASNCIYGIQYGDQSFSVGFLAKEKFTLTNSDVFDGVYFGCGENNQGLFTGVAGLLGLGRDKLSFPSQTATAYNKIFSYCLPSSASYTGHLTFGSAGISRSVKFTPISTITDGTSFYGLNIVAITVGGQKLPIPSTVFSTPGALIDSGTVITRLPPKAYAALRSSFKAKMSKYPTTSGVSILDTCFDLSGFKTVTIPKVAFSFSGGAVVELGSKGIFYVFKISQVCLAFAGNSDDSNAAIFGNVQQQTLEVVYDGAGGRVGFAPNG
type: DOMAIN
name: CND41-like
description: CND41-like

phrase: YGLNIVAITVGGQKLPIPSTVFSTPGALIDSGTVITRLPPKAYAALRSSFKAKMSKYPTTSGVSILDTCFDLSGFKTVTIPKVAFSFSGGAVVELGSKGIFYVFKISQVCLAFAGNSDDSNAAIFGNVQQQTLEVVYDGAGGRVGF
type: DOMAIN
name: TAXi_C
description: Xylanase inhibitor, C-terminal

phrase: YIVTVGLGTPKNDLSLIFDTGSDLTWTQCQPCVRTCYDQKEPIFNPSKSTSYYNVSCSSAACGSLSSATGNAGSCSASNCIYGIQYGDQSFSVGFLAKEKFTLTNSDVFDGVYFGCGENNQGLFTGVAGLLGLGRDKLSFPSQTATAYNKIFSYCLPSSASYTGHLTFG
type: DOMAIN
name: TAXi_N
description: Xylanase inhibitor, N-terminal

phrase: YIVTVGLGTPKNDLSLIFDTGSDLTWTQCQPCVRTCYDQKEPIFNPSKSTSYYNVSCSSAACGSLSSATGNAGSCSASNCIYGIQYGDQSFSVGFLAKEKFTLTNSDVFDGVYFGCGENNQGLFTGVAGLLGLGRDKLSFPSQTATAYNKIFSYCLPSSASYTGHLTFGSAGISRSVKFTPISTITDGTSFYGLNIVAITVGGQKLPIPSTVFSTPGALIDSGTVITRLPPKAYAALRSSFKAKMSKYPTTSGVSILDTCFDLSGFKTVTIPKVAFSFSGGAVVELGSKGIFYVFKISQVCLAFAGNSDDSNAAIFGNVQQQTLEVVYDGAGGRVGF
type: DOMAIN
name: PEPTIDASE_A1
description: Peptidase family A1 domain
Protein sequence:
MINISFPDGSVKQFEKNITAFEIAVVISTSLAKAAMIAEINGDLKDLSTQIDNDCRLRILTAKDPECLEVIRHDAAHLTAEAVKELFPETQVTIGPAIENGYYYDFARDKPFTTDDLAVIEAKMHELAKKNEKVTRELWDREKAVEFFKSIGEHYKAEIIASIPSNEPISLYRQGNFIDLCRGPHAPSTGFVKHFKLMKVAGAYWRGDSRNEVLQRIYGTAWATKEQLESYLFMLEEAEKRDHRKLGKELDLFHFQEEAQGMVFWHDKGWSVYNTIEQYIRRKIRKNGYIEVKTPVLVDKSLWELSGHWEKFRDDMFALETDDKTLALKPMNCPCHVQIFKQGIKSYRDLPLRMSEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAEEQITDETVSFCKLLTEVYKDFGFTDIKVKFSDRPEVRAGSSETWDKAENALKEAVEKAGYSYTLNPGEGAFYGPKLEFVLTDAIGRQWQCGTLQMDFVLPERLDASYVAASGEKKRPVMLHRAILGSLERFIGILIEEYAGRFPLWLAPVQVAIATITSDLNDYALEVQKALIESGVRVDINISPDKINYKIREFSNQKVPMIAVIGKQEKENKQVTIRRLGTTEQEVLSIEQLIEYIREENSKYI

Annotated regions:
phrase: LETDDKTLALKPMNCPCHVQIFKQGIKSYRDLPLRMSEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAEEQITDETVSFCKLLTEVYKDFGFTDIKVKFSDRPEVRAGSSETWDKAENALKEAVEKAGYSYTLNPGEGAFYGPKLEFVLTDAIGRQWQCGTLQMDFVLPERLDASYVAASGEKKRPVMLHRAILGSLERFIGILIEE
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: ISLYRQGNFIDLCRGPHAPSTGFVKHFKLMKVAGAYWRGDSRNEVLQRI
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD

phrase: DHRKLGKELDLFHFQEEAQGMVFWHDKGWSVYNTIEQYIRRKIRKNGYIEVKTPVLVDKSLWELSGHWEKFRDDMFALETDDKTLALKPMNCPCHVQIFKQGIKSYRDLPLRMSEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAEEQITDETVSFCKLLTEVYKDFGFTDIKVKFSDRPEVRAGSSETWDKAENALKEAVEKAGYSYTLNPGEGAFYGPKLEFVLTDAIGRQWQCGTLQMDFVLPERLDASYVAASGEKKRPVMLHRAILGSLERFIGILIEEYAGRF
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: PVQVAIATITSDLNDYALEVQKALIESGVRVDINISPDKINYKIREFSNQKVPMIAVIGKQEKENKQVTIRRLGTTEQEVLSIEQLIEYI
type: DOMAIN
name: ThrRS_anticodon
description: Threonine-tRNA ligase, class IIa, anticodon-binding domain

phrase: INISFPDGSVKQFEKNITAFEIAVVISTSLAKAAMIAEINGDLKDLSTQIDNDCRLRIL
type: DOMAIN
name: TGS
description: TGS

phrase: QVAIATITSDLNDYALEVQKALIESGVRVDINISPDKINYKIREFSNQKVPMIAVIGKQEKENKQVTIRRLGTTEQEVLSIEQLIEYIR
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: MINISFPDGSVKQFEKNITAFEIAVVISTSLAKAAMIAEINGDLKDLSTQIDNDCRLRIL
type: DOMAIN
name: TGS
description: TGS

phrase: RDHRKLGKELDLFHFQEEAQGMVFWHDKGWSVYNTIEQYIRRKIRKNGYIEVKTPVLVDKSLWELSGHWEKFRDDMFALETDDKTLALKPMNCPCHVQIFKQGIKSYRDLPLRMSEFGLCHRNEASGALHGLMRVRSLVQDDAHIFCAEEQITDETVSFCKLLTEVYKDFGFTDIKVKFSDRPEVRAGSSETWDKAENALKEAVEKAGYSYTLNPGEGAFYGPKLEFVLTDAIGRQWQCGTLQMDFVLPERLDASYVAASGEKKRPVMLHRAILGSLERFIGILIEEYAGRFPLWLA
type: DOMAIN
name: ThrRS_core
description: Threonine-tRNA ligase catalytic core domain

phrase: ISLYRQGNFIDLCRGPHAPSTGFVKHFKLMKVAGAYWRGDSRNEVLQRI
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD
Protein sequence:
MSFKDLRSFIDHLEANGELKRISYPVDPHLEMTEIADRVLRAKGPALLFENPTNHSMPVLANLFGTPKRVAMALGKEDPLALRDVGELLAFLKEPEPPRGFKDAISKIPMFKQALNMPPKTVRNPACQQVVKTGDEVDLTQLPIQHCWPGDVAPLVTWGLTITKGPRKSRQNLGIYRQQLLGKNKLIMRWLSHRGGALDFADFKEQFPGERYPVVVALGSDPVTILGAVTPVPDAMSEYAFAGLLRGERTEVCKALSCDLEVPASSEIILEGYIDPDEMAEEGPYGDHTGYYNETDKFPVFTVTHITHRKDPIYHSTYTGRPPDEPAMLGVALNEVFVPILRKQYPEIIDFYLPPEGCSYRMAVISIRKQYPGHAKRVMMGAWSFLRQFMYTKFIVVVDDDVNCRDWNDVIWAITTRMDPKRDTVMIDNTPIDYLDFASPVAGLGSKMGLDATNKWEGETNREWGTPIVMDPKVKQKIDSIWDELGIDDSPTL

Annotated regions:
phrase: IDHLEANGELKRISYPVDPHLEMTEIADRVLRAKGPALLFENPTNHSMPVLANLFGTPKRVAMALGKEDPLALRDVGEL
type: DOMAIN
name: UbiD-like_N
description: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase-like, N-terminal domain

phrase: MLGVALNEVFVPILRKQYPEIIDFYLPPEGCSYRMAVISIRKQYPGHAKRVMMGAWSFLRQFMYTKFIVVVDDDVNCRDWNDVIWAITTRMDPKRDTVMIDNTPIDYLDFASPVAGLGSKMGLD
type: DOMAIN
name: UbiD-like_C
description: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase-like, C-terminal domain

phrase: VRNPACQQVVKTGDEVDLTQLPIQHCWPGDVAPLVTWGLTITKGPRKSRQNLGIYRQQLLGKNKLIMRWLSHRGGALDFADFKEQFPGERYPVVVALGSDPVTILGAVTPVPDAMSEYAFAGLLRGERTEVCKALSCDLEVPASSEIILEGYIDPDEMAEEGPYGDHTGYYNETDKFPVFTVTHITHRKDPIYHSTYTGR
type: DOMAIN
name: UbiD_Rift_dom
description: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase-like, Rift-related domain
Protein sequence:
MKYKDLRDFIAQLEQNGQLKRITREIDPYLEMTEISDRTLRAGGPALLFENPKGYSMPVLTNLFGTPDRVAMGMGQPNVGALRQVGTWLSYLKEPEPPRGLKELMEKLPIFKQVLNMPTKRLSSAPCQQLVLEGEAVDLDQIPIQHCWPGDVAPLVTWGLTITRGPYKKRQNLGIYRQQKIGKNKLIMRWLDHRGGAIDFREWQEAHPGERFPVVVALGADPATILGAVTPVPDSLSEYAFAGLLRGSRTEVVKALSCDLEVPASAEIVLEGYLEPGELAPEGPYGDHTGYYNEVDEFPVFTITHMTMRRDAIYHSTYTGRPPDEPAVLGVALNEVFVPLLQKQFPEIVDFYLPPEGCSYRMAVVTIKKRYPGHAKRVMLGVWSFLRQFMYTKFVIVCDDDINARDWKDVIWAITTRMDPARDTTLIEHTPIDYLDFASPVSGLGSKMGLDATNKWPGETNREWGQPIVQDEAVKQKVDSIWAELNILG

Annotated regions:
phrase: IAQLEQNGQLKRITREIDPYLEMTEISDRTLRAGGPALLFENPKGYSMPVLTNLFGTPDRVAMGMGQPNVGALRQV
type: DOMAIN
name: UbiD-like_N
description: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase-like, N-terminal domain

phrase: VLGVALNEVFVPLLQKQFPEIVDFYLPPEGCSYRMAVVTIKKRYPGHAKRVMLGVWSFLRQFMYTKFVIVCDDDINARDWKDVIWAITTRMDPARDTTLIEHTPIDYLDFASPVSGLGSKMGLD
type: DOMAIN
name: UbiD-like_C
description: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase-like, C-terminal domain

phrase: SSAPCQQLVLEGEAVDLDQIPIQHCWPGDVAPLVTWGLTITRGPYKKRQNLGIYRQQKIGKNKLIMRWLDHRGGAIDFREWQEAHPGERFPVVVALGADPATILGAVTPVPDSLSEYAFAGLLRGSRTEVVKALSCDLEVPASAEIVLEGYLEPGELAPEGPYGDHTGYYNEVDEFPVFTITHMTMRRDAIYHSTYTGR
type: DOMAIN
name: UbiD_Rift_dom
description: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase-like, Rift-related domain
Protein sequence:
MNYFRYKQFNKDVITVAVGYYLRYTLSYRDISEILRERGVNVHHSTVYRWVQEYAPILYQIWKKKHKKAYYKWRIDETYIKIKGKWSYLYRAIDAEGHTLDIWLRKQRDNHSAYAFIKRLIKQFGKPQKVITDQAPSTKVAMAKVIKAFKLKPDCHCTSKYLNNLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYALYKKNRRSLQIYGFSPCHEISIMLAS

Annotated regions:
phrase: QEYAPILYQIWKKKHKKAYYKWRIDETYIKIKGKWSYLYRAIDAEGHTLDIWLRKQRDNHSAYAFIKRLIKQFGKPQKVITDQAPSTKVAMAKVIKAFKLKPDCHCTSKYLNNLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYALYKKNRRSLQIYGFSPCHEISIM
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: KWRIDETYIKIKGKWSYLYRAIDAEGHTLDIWLRKQRDNHSAYAFIKRLIKQFGKPQKVITDQAPSTKVAMAKVIKAFKLKPDCHCTSKYLNNLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYALYK
type: DOMAIN
name: DDE_dom
description: DDE domain
Protein sequence:
MGRIAKYYREYGIRIVKGFMQYVWDDKGQRYIDCNTNHGVVFLGHANPKIVEAVKKQVEEIWAVPLNFATPARERFIEEFSKLLPPKFGVVFLQNTGTEAVEVAIKIAKKVTRKPTIVAFTNSFHGRTMGSLSITWNEKYKKAFEPLYPHVRFGKFNVPHEVDKLIGEDTCCVVVEPIQGEGGVNPATPEFLKALREEAQRKGALLIFDEVQTGFGRTGAVWAFQKYGVEPDIFTAGKPVAGGLPIGLAVAREDFGDVFEPGEHGSTFAGNAVVMAAAAAASRLLREEDVPGRAERIGAELAKALGDTGSRLAVRVKGMGLMLGLELRVKADQFIQPLLERGVMALTAGVNTLRFLPPYMISKEDVEVVHAAVTEVLKKAEQQ

Annotated regions:
phrase: LIFDEVQTGFGRTGAVWAFQKYGVEPDIFTAGKPVAG
type: CONSERVED_SITE
name: Aminotrans_3_PPA_site
description: Aminotransferases class-III pyridoxal-phosphate attachment site
Protein sequence:
MIRRYWNINFEEMMKAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLVFDAASRRKQFLIVGTKNKAADSVARAAIRARCHYVNKKWLGGILTNWSTTETRLQKFRDLRMEQKAGRLNRLPKGDAARLKRQLAHLQTYLGGIKYMTGLPDIVIIVDQQEEYTALRECMTLGIPTICLIDTNCDPDLADISIPTNDDAIASIRLILNKLVFAICEGRSSYIRNP

Annotated regions:
phrase: FEEMMKAGVHF
type: CONSERVED_SITE
name: Ribosomal_uS2_CS
description: Small ribosomal subunit protein uS2, conserved site

phrase: PDIVIIVDQQEEYTALRECMTLGI
type: CONSERVED_SITE
name: Ribosomal_uS2_CS
description: Small ribosomal subunit protein uS2, conserved site
Protein sequence:
MSKLAEKLKAVAAAVASIEKQFGRGSVMTLGGEAREQKVAVIPSGSVGVDRALGVGGYPRGRVVEVFGNESSGKTTLTLHAIAQVQAAGGVAAFIDAEHALDVSYARKLGVRVEELLVSQPDTGEQALEITEHLVRSGAVDLIVVDSVAALVPRAEIEGEMGDAHMGVQARLMSQALRKLTGAVSRSGTCIIFINQIRMKIGVMFGNPETTTGGNALKFYASVRMEIRRTGNIKDGDAVVGSKARVKVVKNKVAPPFQEAEFDLMYGSGIHRVGEVLDLGVATGLIEKSGSYFSLRGERIGQGRERAAEWLREHPDVLEALGKEITGTSALPSSPAPVEVAA

Annotated regions:
phrase: KVAVIPSGSVGVDRALGVGGYPRGRVVEVFGNESSGKTTLTLHAIAQVQAAGGVAAFIDAEHALDVSYARKLGVRVEELLVSQPDTGEQALEITEHLVRSGAVDLIVVDSVAALVPRAEIEGEMGDAHMGVQARLMSQALRKLTGAVSRSGTCIIFINQ
type: DOMAIN
name: RecA_ATP-bd
description: DNA recombination and repair protein RecA-like, ATP-binding domain

phrase: GVMFGNPETTTGGNALKFYASVRMEIRRTGNIKDGDAVVGSKARVKVVKNKVAPPFQEAEFDLMYGSGIHRVG
type: DOMAIN
name: RecA_monomer-monomer_interface
description: DNA recombination and repair protein RecA, monomer-monomer interface

phrase: ALKFYASV
type: CONSERVED_SITE
name: DNA_recomb/repair_RecA_CS
description: DNA recombination/repair protein RecA, conserved site

phrase: RGRVVEVFGNESSGKTTLTLHAIAQVQAAGGVAAFIDAEHALDVSYARKLGVRVEELLVSQPDTGEQALEITEHLVRSGAVDLIVVDSVAALVPRAEIEGEMGDAHMGVQARLMSQALRKLTGAVSRSGTCIIFINQIRMKIGVMFGNPETTTGGNALKFYASVRMEIRRT
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: KAVAAAVASIEKQFGRGSVMTLGGEAREQKVAVIPSGSVGVDRALGVGGYPRGRVVEVFGNESSGKTTLTLHAIAQVQAAGGVAAFIDAEHALDVSYARKLGVRVEELLVSQPDTGEQALEITEHLVRSGAVDLIVVDSVAALVPRAEIEGEMGDAHMGVQARLMSQALRKLTGAVSRSGTCIIFINQIRMKIGVMFGNPETTTGGNALKFYASVRMEIRRTGNIKDGDAVVGSKARVKVVKNKVAPPFQEAEFDLMYGSG
type: DOMAIN
name: RecA-like_N
description: RecA-like, N-terminal

phrase: GEVLDLGVATGLIEKSGSYFSLRGERIGQGRERAAEWLREHPDVLEALGKEI
type: DOMAIN
name: RecA-like_C
description: RecA-like, C-terminal
Protein sequence:
MQATAVVETASNKGYNNNGRNIQKDEPSHHKKENLLSPNGCKEAKLTFLNDYYDSLALEKRANDKEISNIDKIDLLEPSFTMSPDTNIESAHSQSSEFEDNIDYAFLNETYTIHYSESKLKSESLIHLNSELDSEMQKREEVFFDILEHQGDKITDLERIYKISYDDYKKTAEDVQKPDIDEDSQQEYHSAEEQECINNHLSFDQAKTLDIPNLEVLGLRNSGCEVKCVSNLEDSHVKLESNSSISLDSVDVYGQEDSPSVSKLQNSVTLRAFHEPKYEKCKEQGTSLMLHTVLDEIILRSSHLEHKESESKGFLNPQKALKTKIYTHKVNPQLTESKDSIGNVIVEDKMLQHLDNPGTLPQDKHLETLLQPCKDCQTSSVFDDSVISASGYSHYESLQSTPNPALDVSITLPRSAIRGNQAVEESGSLKVANGNTISKAHFHNMEGPCPKSETDAAGCTVTVDQTVDVSTDFRACFTASRATSARSSVVSTSSNTEITMMNKKRPSEWQSEKQRSVACNTDWSYIQDTEDPQMAMTKGPTGKSLSVDNLKPNGNVLNKDSLELKTFEFTDLKKHSESMLQIQVEKNLPSKCCQQIMQRAIQAESHLLNVHYQLCHRHCSDIYRLVMEDREGLNRNLSSNSTRKELGSALLSVLGDLKVRYMNLKEKINKGIPLEELPPLSIESRLLSAFSTFASRLMKEESHIFSGADSELDNQSTRDVGSSSLKKTLSQTSLLLDNGHPKQDKSPEEGGLKNGDINVDLSQLKLDDKDCKNYREVSEDWFDAKENLTGADFSGIQENQIEQDKGDPKFTLAEIKNVEPLRKDKGYLMHVGGLCPSVSEADLRSYFQKYEISDISIYDSSPNYRYASLAFKKNSDAKMAVKEMNGIEIKGKSVNVRLVKTPGEYTPLSSKNGNKVSFSNLEKSTSKEMSSPSSVSRLPRTRPRQPGSEQDSEFFPFDQKGVKKNCKQIESTKLLPDTPIQFIPPKTLNLRSFTKIIKRLAELHPEVSRHRDHIIDALQEVRVNHKGFLNGLSINTIVEMTSSVLENSASS

Annotated regions:
phrase: LMHVGGLCPSVSEADLRSYFQKYEISDISIYDSSPNYRYASLAFKKNSDAKMAVKEMNGIEIKGKSVNV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: YLMHVGGLCPSVSEADLRSYFQKYEISDISIYDSSPNYRYASLAFKKNSDAKMAVKEMNGIEIKGKSVNVRLVK
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: VGGLCPSVSEADLRSYFQKYEISDISIYDSSPNYRYASLAFKKNSDAKMAVKEMNGIEIKGKS
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain
Protein sequence:
MSKEDVIEVEGKVLEPLPNAMFLVELSNGHKVLAHVSGKIRMNFIRILPGDRVTVELSPYDLSRGRIVYRFK

Annotated regions:
phrase: MSKEDVIEVEGKVLEPLPNAMFLVELSNGHKVLAHVSGKIRMNFIRILPGDRVTVELSPYDLSRGRIVYRF
type: DOMAIN
name: RNA-binding_domain_S1_IF1
description: RNA-binding domain, S1, IF1 type

phrase: EDVIEVEGKVLEPLPNAMFLVELSNGHKVLAHVSGKIRMNFIRILPGDRVTVELSPYDLSRGRIVYRF
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: IEVEGKVLEPLPNAMFLVELSNGHKVLAHVSGKIRMNFIRILPGDRVTVELSPYDLSRGRIVY
type: DOMAIN
name: RNA-binding_domain_S1_IF1
description: RNA-binding domain, S1, IF1 type
Protein sequence:
MRVRGILRNWQHWGIWGILGFWMLMICSGGEDLWVTVYYGVPVWKEAKTTLFCASDAKAYEKEVHNIWATHACVPTDPNPQEIVLGNVTENFNMWKNDMVDQMHEDIISLWDESLKPCVKLTPLCVTLNCTDYKTKNNTTNHNSSMNNITNEIKECSFNITTEIRDKEKKEHALFYKLDIVSPNNNSEYILINCNTSAIAQACPKVSFDPIPIHYCAPAGYAILKCNNKTFNGTGPCTNVSTVQCTHGIKPVVSTQLLLNGSLAEEGIIISSENLTDNAKTIIVHLNETVNITCARPGNNTRKSIRIGPGQSFFATGDIIGDIRQAHCNISAGKWNKILDQVVEKLREHFPNKTIKFQPSSGGDLEITTHSFNCRGEFFYCNTSDLFNRTYNLNSTDNSTGSDNNSTITLQCRIKQIINMWQKVGKAIYAPPIAGNITCESNITGLLLTRDGGNSDPEIFRPGGGDMRDNWRSELYKYKVVEIKPLGIAPTKAKRRVVEREKRAVGIGAVFVGFLSAAGSTMGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHMLKLTVWGIKQLQARVLAVERYLQDQQLLGIWGCSGKLICTTSVPWNSSWSNKSQDYIWGNMTWMQWDREISNYTDIIYNLLGDSQIQQEKNEKDLLALDSWKNLWSWFDISNWLWYIRIFIMIVGGLIGLRIVFAVLSIINRVRQGYSPLSLQTLIPNPRGPDKLERIEEEGGEQDRDRSIRLVSGLLPLFWDDLRSLCLFSYHQLRDFIL

Annotated regions:
phrase: MGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHMLKLTVWGIKQLQARVLAVERYLQDQQLLGIWGCSGKLICTTSVPWNSSWSNKSQDYIWGNMTWMQWDREISNYTDIIYNLLGDSQIQQEKNEKDLLALDSWKNLWSWFDISNWLWYIRIFIMIVGGLIGLRIVFAVLSIINRVRQGYSPLSLQT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKEAKTTLFCASDAKAYEKEVHNIWATHACVPTDPNPQEIVLGNVTENFNMWKNDMVDQMHEDIISLWDESLKPCVKLTPLCVTLNCTDYKTKNNTTNHNSS
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: TNEIKECSFNITTEIRDKEKKEHALFYKLDIVSPNNNSEYILINCNTSAIAQACPKVSFDPIPIHYCAPAGYAILKCNNKTFNGTGPCTNVSTVQCTHGIKPVVSTQLLLNGSLAEEGIIISSENLTDNAKTIIVHLNETVNITCARPGNNTRKSIRIGPGQSFFATGDIIGDIRQAHCNISAGKWNKILDQVVEKLREHFPNKTIKFQPSSGGDLEITTHSFNCRGEFFYCNTSDLFNRTYNLNSTDNSTGSDNNSTITLQCRIKQIINMWQKVGKAIYAPPIAGNITCESNITGLLLTRDGGNSDPEIFRPGGGDMRDNWRSELYKYKVVEIKPLGIAPTKAKRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: VQARQLLSGIVQQQSNLLRAIEAQQHMLKLTVWGIKQLQARVLAVERYLQDQQLLGIWGCSGKLICTTSVPWNSSWSNKSQDYIWGNMTWMQWDREISNYTDIIYNLLGDSQIQQEKNEKDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MLFRYITFHREKVLYLTAACIFGVYISLHDACIPVVGKIGTNVTLNAVDVLPPRDQVRWSYGPGGQGYMLCIFTGTSTTTFNNTRFNFSCLSNYSLLLINVTTQYSTTYRTMTSLDHWLHQRHNHGSRWTLDTCYNLTVNENGTFPTTTTKKPTTTTRTTTTTTQRTTTTRTTTTAKKTTISTTHHKHPSPKKSTTPNSHVEHHVGFEATAAETPLQPSPQHQHLATHALWVLAVVIVIIIIIIFYFRIPQKLWLLWQHDKHGIVLIPQTDL

Annotated regions:
Protein sequence:
MILVIDVGNTNTVLGVYQDETLVHHWRLATSRQKTEDEYAMTVRSLFDHAGLQFQDIDGIVISSVVPPMMFSLEQMCKKYFHVTPMIIGPGIKTGLNIKYDNPKEVGADRIVNAVAAIELYGYPAIVVDFGTATTYCLINEKKQYAGGVIAPGIMISTEALYHRASKLPRIEIAKPKQVVGTNTIDSMQSGIFYGYVSQVDGVVKRMKAQAESEPKVIATGGLAKLIGTESETIDVIDSFLTLKGLQLIYKKNV

Annotated regions:
Protein sequence:
MRVKGIRKNYQHLWKWGTMWRWGTMLLGMLMICSAAEQLWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEIELVNVTENFNMWKNNMVEQMQEDIISLWDQSLKPCVKLTPLCVTLNCTDISNNSNTTNTSNPIIGEKMDRGEIKNCSFNITTNIRNKMQSTYALFYKLDVEPIDKNKNTTRYRLISCNNSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKTFNGTGPCNKVSTVQCTHGIRPVVSTQLLLNGSLAEEGVVIRSENFTDNAKTILVQLKEPVEINCTRPNNKARRRIRIGPGRTFYTGKIVGDIRQAYCNISRAKWNNTLNQIVTKLREIEQFKNKTIVFNQSSGGDPEIVMHSFNCRGEFFYCNSTQLFNSTWNSTWNVDETSNDTATLKLPCRIKQFVNMWQEVGKAMYAPPIDGQISCSSNITGLLLTRDGGNNTNETETFRPGGGDMRDNWRSELYKYKVVKVKPLGVAPTRAKRRVVQREKRAVGIGAVLLGFLGAAGSTMGAASLTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNTSWSNRSHDSIWNNMTWMQWEREIDNYTGLIYTLIEESQNQQEKNEQELLELDKWASLWDWFSITKWLWYIKIFIMIVGGLIGLRIVFAVLSIVNRVRQGYSPLSFQTLLPTPRGPDRPGGIEEEGGERDRDRSVRLVDGFLALIWDDLRN

Annotated regions:
phrase: VQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNTSWSNRSHDSIWNNMTWMQWEREIDNYTGLIYTLIEESQNQQEKNEQELLELD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASLTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNTSWSNRSHDSIWNNMTWMQWEREIDNYTGLIYTLIEESQNQQEKNEQELLELDKWASLWDWFSITKWLWYIKIFIMIVGGLIGLRIVFAVLSIVNRVRQGYSPLSFQT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEIELVNVTENFNMWKNNMVEQMQEDIISLWDQSLKPCVKLTPLCVTLNCTDISNNSNTTNTSNPIIGEKMDRGEIKNCSFNITTNIRNKMQSTYALFYKLDVEPIDKNKNTTRYRLISCNNSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKTFNGTGPCNKVSTVQCTHGIRPVVSTQLLLNGSLAEEGVVIRSENFTDNAKTILVQLKEPVEINCTRPNNKARRRIRIGPGRTFYTGKIVGDIRQAYCNISRAKWNNTLNQIVTKLREIEQFKNKTIVFNQSSGGDPEIVMHSFNCRGEFFYCNSTQLFNSTWNSTWNVDETSNDTATLKLPCRIKQFVNMWQEVGKAMYAPPIDGQISCSSNITGLLLTRDGGNNTNETETFRPGGGDMRDNWRSELYKYKVVKVKPLGVAPTRAKRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MNSMNTYSPLYSSYENINIYKKNRKFEEDNYETSTANISCDSKGRILVKESENDRNESIQKKQMLSSMDNRKTNKSEKHNISSYYKMRKKASNHLKDKEKLNNNIIYAKNPHANRYDKYYSLNMNIMNNMNNMNNMNNVNNMNNVNNMNNVNNMNNMNNVNNMNNMNNVNNMNNVKSMYNNNNNSNVYYRISRQNINGKERLLNRYNIMRPQRSADMLIRNYLYNDLPYEINQQNLNKNINDNNAGSFDNLNKTVFENYNKNILDEYNRNIMQYYNSNLKNYRNSSFDNIYTRYNNNNNNNNVYSNNNVYSNNNIYNNNNNNDNINNSFQFSKQEGLMKIYSNNNRNMNDYVVKTSNITRAADNTCAQEQINIPTYNKTVLLKSSPNTENTFNKTLSNILKEQPKRSSMFSFNSSDFFKDFGKLRKNFVGKKKNKINKDIVINGNIFNNKIIDNNTSNAKSEGNSTLHKIYNFIFPSSVKKLQKKKQKLQVIEDKEKNSNRAVVMPLKNKIIYINDANITNDKFKHSFENYNYHQTNIPFVSVTNYMNKDSTKNVRSFSSFDVKERISPRVIRNGNINNNKNNNINNNNNNINNNNNNINNNNNNINNNNNINNNNNINNNNNINNNNNINNNNINNINNINNDFVNDSNINKTVNIHNNNNNLNNYSNTMKSVAKNTQKLSAQKNSLVNDKHHTYHEKLITNIYQFTGGQSQKSCNIKNQNVKEEKINNTQISYINNTAYNDYTNLPNVETYVLSEKSNNLENKEDNNINEKFKNDNNVDKKNNDENNIIKHNVNQNNNEVIVMNNQTEEQINDNKFIKPLNNITGIDPKKKNIYNTVMHINDKMDLNKHDYNYNYNNIIPHNYINSSDKMTNNSLHINKKADDIFQNMISNNDTNVPCVYVNKYINNIFQNNNPSNVTNYINTINMNKAPITIDENSNKLDNNINYENVTKNMIYNNYTNNNVLYITKEKSDNKLNNSTNHLNDLKNNYYVINPSLLYIHNNNNNIEWNKQYTNNFSKPNFLDKFFYEKKVESIQPHHLNQYYYNNQNVKYNPSHINILENKYVNQFTNQNENSLYNFTTHHNNIKNNNIDNILLLDKAIRNQSIYYNNNKGDDETKSAEHTTNPSINLLKNNYEDKNKSNYVHSIVSITDKDNSIYAKNKYAEVVTKNNEKREDAIHKKDEQYIFNNNDNNNDNIHNNNIHNNIHNNIHNNIHNNIHNNIHNNIHNNIHNNIHNNIHNNIHNNIDVSSRENFFQHDIQNTNQINNKTILDITQNEKPNATNEKCLDINNKEKKKKKIKSVHYDMDEILSLKCKVYDELDTCLKCINNLTKNKKLYEQLKKYKHKLDKDTKTKKLYDECTSEKTGSYYTMKDSYISSLLCNEYKLNHILNKSNNKVSDDKHILSYNHHHNKNNNINDINNIKHISKFVNKDNEKTLNNINILNHNNKDPNSGVFLPSDNTESVIYNMNRNRKLCDNNFNVSKHVLYKDSKGTDSTRTNFYDDYSMSYVKSNVDNVEKKEKIKNNINISDKYFLSETDSPYIGKKKALMITLNYNGLLEGCVNDTVDMCDHLMQRFGFNDFILLNDCNLCYRNFVTQKANKKNILSNLHNFIVNSNNGDILFFYFCGYSIKLIDSKFTENYNFALLPQDHSKNNYIYSNEIFNIIKKLQGGKQLCIIFDTTYTSYFVPVPTSITYNKNMNTTEIYKYNNFSSNQKYLKSLKTFGKIRDRNVDSIFVENIKKPLLYEIYKKENDTNTNDKIILVPSIFFFSPDCNDRNDFEFSIKNKVRGLLTYCLGKAIELLKNDFSYHDLFVAASQILIDIKKEYNLKYVKFKLSFLNEYSPDDIKFLSHESLFLKKKLQLDEPLWKPSLKLNNLNQYIQDICNMDERKMLKSSKKKCLLIFIKDIKFYTYKNIDTKNEYFVSCFIKNKNVNILCVRRNNTKEQRIVQDKIFFLEYITLNVTHMENANIYVELFKKKKKNYFVARSIFNIRNVNGKFSLSDEKKNIIGIIDLNIKCVS

Annotated regions:
Protein sequence:
MTMRSKFSIDRVLHDTAFAKWCQKEESRNADSITLYTSILDFESKLKTGSPSLSLLKLARHIHRKYVSLNTGTCHVIGDSIRTKISTRVHEVLDGKPPYIDLFDPLKQPLFQHLRSMHTEFSTTTADVNTTWEDASSTSSSNKGATIWFNEDAIDKSSRHEIGQSTVTHESEDDRFSFFNAVCTRLNSLQETKNSSETEEHAESPRKEKSSTPYGTDGFAPPPRSTQTNTLKVSNLPKRFESLYKKKRQQVATSDSSGFGSNASDFWSFERYGKSNQGTLERPNRLFTGTNNGFSTLQPKRRGSEAPKMTVELRYENDVPMVAKISANHAQSVTLRYFRHLFGLHYTDNCRFFFKSTCEDGSAQYQWTLLFHDDDILPVFQNRITAICRMCPPPEDHDLI

Annotated regions:
phrase: NDVPMVAKISANHAQSVTLRYFRHLFGLHYTDNCRFFFKSTCEDGSAQYQWTLLFHDDDILPVFQNRIT
type: DOMAIN
name: DIX
description: DIX domain

phrase: FAKWCQKEESRNADSITLYTSILDFESKLKTGSPSLSLLKLARHIHRKYVSLNTGTCHVIGDSIRTKISTRVHEVLDGKPPYIDLFDPLKQPLFQHLR
type: DOMAIN
name: RGS
description: RGS domain

phrase: EAPKMTVELRYENDVPMVAKISANHAQSVTLRYFRHLFGLHYTDNCRFFFKSTCEDGSAQYQWTLLFHDDDILPVFQNRITAICRMC
type: DOMAIN
name: DIX
description: DIX domain