nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MVEYNRIFCVLVIFSTTIKCEYSELMNQKIGVRVEVLNMIYENETTITSTGHPRCRLTLHKSGWDRDTCSSPQFKLNDTLSWSTRVCYKWVCDTTKYAMRVESCWIGSPNMSVYILRDDGCTIEKAILTSPVYTSFNRAAAIGWMAVRQKNMKYMHVGCTIRLCHLCDPKCQTITPPRTCNDNRADDYEAMWNSSSRVKNLCFPEPSTTENLNLNFGNSPFQNVGNIIILLLVFLLR

Annotated regions:
phrase: MVEYNRIFCVLVIFSTTIKCEYSELMNQKIGVRVEVLNMIYENETTITSTGHPRCRLTLHKSGWDRDTCSSPQFKLNDTLSWSTRVCYKWVCDTTKYAMRVESCWIGSPNMSVYILRDDGCTIEKAILTSPVYTSFNRAAAIGWMAVRQKNMKYMHVGCTIRLCHLCDPKCQTITPP
type: DOMAIN
name: ZP_dom
description: Zona pellucida domain
Protein sequence:
MSEAVRVPSPATPLVVAAPAPEERKGKESEREKLPPIVSAGAGATAGLDRGAKGQISTFSSFISAVSPKKEAAENRSSPAHLVFPNIKNVREPPPICLDVRQKQRTSMDASSSEMKAPVLPEPILPIQPKTVKDFQEDVEKVKSSGDWKAVHDFYLTTFDSFPELNAAFKKDATASFNTIEDSGINAKFVNAVYDTLLNTPQDVQKTVLKGIINSLLREWKGPRTKDDLRAYFILLQNPQFNNTSTYVIYAHLLRQIATLVEADHHFLVHWFKKLSQKRFKQLVERLLQFISLRLFPAKPEEFPPITKCSWWIPSAAKVLALLNTANNLVHPPLIPYTDFYNSTLDHIDLMEEYHTWQNFGNSHRFSFCQYPFVISVAAKKIIIQRDSEQQMINIARQSLVDKVSRRQRPDMNILFLNMKVRRTHLVSDSLDELTRKRADLKKKLKVTFVGEAGLDMGGLTKEWFLLLIRQIFHPDYGMFTYHKDSHCHWFSSFKCDNYSEFRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPIIPSDQNIPVGICNVTVDDLCQIMPELAHGLSELLSHEGNVEEDFYSTFQVFQEEFGIIKSYNLKPGGDKISVTNQNRKEYVQLYTDFLLNKSIYKQFAAFYYGFHSVCASNALMLLRPEEVEILVCGSPDLDMHALQRSTQYDGYAKTDLTIKYFWDVVLGFPLDLQKKLLHFTTGSDRVPVGGMADLNFKISKNETSTNCLPVAHTCFNQLCLPPYKSKKDLKQKLIIGISNSEGFGLE

Annotated regions:
phrase: KRADLKKKLKVTFVGEAGLDMGGLTKEWFLLLIRQIFHPDYGMFTYHKDSHCHWFSSFKCDNYSEFRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPIIPSDQNIPVGICNVTVDDLCQIMPELAHGLSELLSHEGNVEEDFYSTFQVFQEEFGIIKSYNLKPGGDKISVTNQNRKEYVQLYTDFLLNKSIYKQFAAFYYGFHSVCASNALMLLRPEEVEILVCGSPDLDMHALQRSTQYDGYAKTDLTIKYFWDVVLGFPLDLQKKLLHFTTGSDRVPVGGMADLNFKISKNETSTNCLPVAHTCFNQLCLPPYKSKKDLKQKLIIGISNSEGFGL
type: DOMAIN
name: HECT_dom
description: HECT domain

phrase: LLIRQIFHPDYGMFTYHKDSHCHWFSSFKCDNYSEFRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPIIPSDQNIPVGICNVTVDDLCQIMPELAHGLSELLSHEGNVEEDFYSTFQVFQEEFGIIKSYNLKPGGDKISVTNQNRKEYVQLYTDFLLNKSIYKQFAAFYYGFHSVCASNALMLLRPEEVEILVCGSPDLDMHALQRSTQYDGYAKTDLTIKYFWDVVLGFPLDLQKKLLHFTTGSDRVPVGGMADLNFKISKNETSTNCLPVAHTCFNQLCLPPYKSKKDLKQKLIIGISNSEGFG
type: DOMAIN
name: HECT_dom
description: HECT domain

phrase: TRKRADLKKKLKVTFVGEAGLDMGGLTKEWFLLLIRQIFHPDYGMFTYHKDSHCHWFSSFKCDNYSEFRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPIIPSDQNIPVGICNVTVDDLCQIMPELAHGLSELLSHEGNVEEDFYSTFQVFQEEFGIIKSYNLKPGGDKISVTNQNRKEYVQLYTDFLLNKSIYKQFAAFYYGFHSVCASNALMLLRPEEVEILVCGSPDLDMHALQRSTQYDGYAKTDLTIKYFWDVVLGFPLDLQKKLLHFTTGSDRVPVGGMADLNFKISKNETSTNCLPVAHTCFNQLCLPPYKSKKDLKQKLIIGISNSEGFGL
type: DOMAIN
name: HECT_dom
description: HECT domain

phrase: LNMKVRRTHLVSDSLDELTRKRADLKKKLKVTFVGEAGLDMGGLTKEWFLLLIRQIFHPDYGMFTYHKDSHCHWFSSFKCDNYSEFRLVGILMGLAVYNSITLDIRFPPCCYKKLLSPPIIPSDQNIPVGICNVTVDDLCQIMPELAHGLSELLSHEGNVEEDFYSTFQVFQEEFGIIKSYNLKPGGDKISVTNQNRKEYVQLYTDFLLNKSIYKQFAAFYYGFHSVCASNALMLLRPEEVEILVCGSPDLDMHALQRSTQYDGYAKTDLTIKYFWDVVLGFPLDLQKKLLHFTTGSDRVPVGGMADLNFKISKNETSTNCLPVAHTCFNQLCLPPYKSKKDLKQKLIIGISNSEGF
type: DOMAIN
name: HECT_dom
description: HECT domain
Protein sequence:
MFKQWEGFQDGEWTNDVNVRDFIQKNYKEYTGDKSFLKGPTEKTKKVWDKAVSLILEELKKGILDVDTETISGINSFKPGYLDKDNEVIVGFQTDAPLKRITNPFGGIRMAEQSLKEYGFKISDEMHNIFTNYRKTHNQGVFDAYSEETRIARSAGVLTGLPDAYGRGRIIGDYRRVALYGIDFLIQEKKKDLSNLKGDMLDELIRLREEVSEQIRALDEIKKMALSYGVDISRPAVNAKEAAQFLYFGYLAGVKENNGAAMSLGRTSTFLDIYIERDLEQGLITEDEAQEVIDQFIIKLRLVRHLRTPEYNELFAGDPTWVTESIAGVGIDGRSLVTKNSFRYLHTLINLGSAPEPNMTVLWSENLPESFKKFCAEMSILTDSIQYENDDIMRPIYGDDYAIACCVSAMRVGKDMQFFGARCNLAKCLLLAINGGVDEKKGIKVVPDIEPITDEVLDYEKVKENYFKVLEYMAGLYVNTMNIIHFMHDKYAYEASQMALHDTKVGRLMAFGIAGFSVAADSLSAIRYAKVKPIRENGITVDFVKEGDFPKYGNDDDRVDSIAVEIVEKFSDELKKHPTYRNAKHTLSVLTITSNVMYGKKTGTTPDGRKVGEPLAPGANPMHGRDMEGALASLNSVAKVPYVCCEDGVSNTFSIVPDALGNDHDVRINNLVSIMGGYFGQGAHHLNVNVLNRETLIDAMNNPDKYPTLTIRVSGYAVNFNRLSKDHQKEVISRTFHEKL

Annotated regions:
phrase: MFKQWEGFQDGEWTNDVNVRDFIQKNYKEYTGDKSFLKGPTEKTKKVWDKAVSLILEELKKGILDVDTETISGINSFKPGYLDKDNEVIVGFQTDAPLKRITNPFGGIRMAEQSLKEYGFKISDEMHNIFTNYRKTHNQGVFDAYSEETRIARSAGVLTGLPDAYGRGRIIGDYRRVALYGIDFLIQEKKKDLSNLKGDMLDELIRLREEVSEQIRALDEIKKMALSYGVDISRPAVNAKEAAQFLYFGYLAGVKENNGAAMSLGRTSTFLDIYIERDLEQGLITEDEAQEVIDQFIIKLRLVRHLRTPEYNELFAGDPTWVTESIAGVGIDGRSLVTKNSFRYLHTLINLGSAPEPNMTVLWSENLPESFKKFCAEMSILTDSIQYENDDIMRPIYGDDYAIACCVSAMRVGKDMQFFGARCNLAKCLLLAINGGVDEKKGIKVVPDIEPITDEVLDYEKVKENYFKVLEYMAGLYVNTMNIIHFMHDKYAYEASQMALHDTKVGRLMAFGIAGFSVAADSLSAIRYAKVKPIRENGITVDFVKEGDFPKYGNDDDRVDSIAVEIVEKFSDELKKHPTYRNAKHTLSVLTITSNVMYGKKTGTTPDGR
type: DOMAIN
name: PFL_dom
description: Pyruvate formate lyase domain

phrase: VNVRDFIQKNYKEYTGDKSFLKGPTEKTKKVWDKAVSLILEELKKGILDVDTETISGINSFKPGYLDKDNEVIVGFQTDAPLKRITNPFGGIRMAEQSLKEYGFKISDEMHNIFTNYRKTHNQGVFDAYSEETRIARSAGVLTGLPDAYGRGRIIGDYRRVALYGIDFLIQEKKKDLSNLKGDMLDELIRLREEVSEQIRALDEIKKMALSYGVDISRPAVNAKEAAQFLYFGYLAGVKENNGAAMSLGRTSTFLDIYIERDLEQGLITEDEAQEVIDQFIIKLRLVRHLRTPEYNELFAGDPTWVTESIAGVGIDGRSLVTKNSFRYLHTLINLGSAPEPNMTVLWSENLPESFKKFCAEMSILTDSIQYENDDIMRPIYGDDYAIACCVSAMRVGKDMQFFGARCNLAKCLLLAINGGVDEKKGIKVVPDIEPITDEVLDYEKVKENYFKVLEYMAGLYVNTMNIIHFMHDKYAYEASQMALHDTKVGRLMAFGIAGFSVAADSLSAIRYAKVKPIRENGITVDFVKEGDFPKYGNDDDRVDSIAVEIVEKFSDELKKHPTYRNAKHTLSVLTITSNVMY
type: DOMAIN
name: PFL_dom
description: Pyruvate formate lyase domain

phrase: TIRVSGYA
type: CONSERVED_SITE
name: Form_AcTrfase_GR_CS
description: Formate C-acetyltransferase glycine radical, conserved site

phrase: APGANPMHGRDMEGALASLNSVAKVPYVCCEDGVSNTFSIVPDALGNDHDVRINNLVSIMGGYFGQGAHHLNVNVLNRETLIDAMNNPDKYPTLTIRVSGYAVNF
type: DOMAIN
name: Gly_radical
description: Glycine radical domain

phrase: PGANPMHGRDMEGALASLNSVAKVPYVCCEDGVSNTFSIVPDALGNDHDVRINNLVSIMGGYFGQGAHHLNVNVLNRETLIDAMNNPDKYPTLTIRVSGYAVNFNRLSKDHQKEVISRTFHEK
type: DOMAIN
name: Gly_radical
description: Glycine radical domain
Protein sequence:
MTVDPIHQFEIKRYVDLLNFGGVQFSFTNAALFMFGIVAIIFFFLTFATRGRTLVPGRAQSAAEMSYEFIAKMVRDSAGSEGMVFFPLVFSLFTFVLVSNVVGLIPYTFTVTAHLIVTAAMALLVIGTVIVYGFVRHGTHFLHLFVPSGVPAFLLPFLVVIEVVSFLSRPISLSLRLFANMLAGHIALKVFAFFVVGLASAGVVGWFGATLPFFMIVALYALELLVAMLQAYVFAVLTSIYLNDAIHPGH

Annotated regions:
phrase: SLSLRLFAN
type: ACTIVE_SITE
name: ATP_synth_F0_asu_AS
description: ATP synthase, F0 complex, subunit A, active site
Protein sequence:
MPLYEGLGSGGEKTAVVIDLGEAFTKCGFAGETGPRCIIPSVIKKAGMPKPIRVVQYNINTEELYSYLKEFIHILYFRHLLVNPRDRRVVVIESVLCPSHFRETLTRVLFKYFEVPSVLLAPSHLMALLTLGINSAMVLDCGYRESLVLPIYEGIPVLNCWGALPLGGKALHKELETQLLEQCTVDTGAAKEQSLPSVMGSIPEGILEDIKVRTCFVSDLKRGLNIQAAKFNIDGNTERPSPPPNVDYPLDGEKILHVLGSIRDSVVEILFEQDNEEKSVATLILDSLMQCPIDTRKQLAENLVVIGGTSMLPGFLHRLLAEIRYLVEKPKYKKTLATKTFRIHTPPAKANCVAWLGGAIFGALQDILGSRSVSKDYYNQTGRIPDWCSLNNPPLEMMFDVGKNQPPLMKRAFSTEK

Annotated regions:
Protein sequence:
MEDLEEDVRFIVDETLDFGGLSPSDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQGVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFVLKDSPVRDLLPTVNSLTRSTPSPSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNLFPASKSPASSPLTRSTPPVRGRAGPSGRAAASEETRAAKLRVSGSGEFVGLTLKFLHPSPPGPPTPIRSVLAPQPSTSNSQRLPRPQGAAAKSSSQLPIPSAIPRPASRMPLTSRSVPPGRGALPPDSLSTRKGLPRPSTAGHRVRESGHKVPVSQRLNLPVMGATRSNLQPPRKVAVPGPTR

Annotated regions:
phrase: RFIVDETLDFGGLSPSDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQGVRLSLGPLSPEKLEEILDEANRLAAQLEQCALQ
type: DOMAIN
name: GTSE1_N
description: G2 and S phase-expressed protein 1, N-terminal
Protein sequence:
MVKRHIGSWILVLFVVMWSDVGLCKKRPKPGGGWNTGGSRYPGQGSPGGNRYPSQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGGWGQGGTHSQWNKPSKPKTNMKHMAGAAAAGAVVGGLGGYMLGSAMSRPLIHFGNDYEDRYYRENMHRYPNQVYYRPVDQYSNQNNFVHDCVNITVKEHTVTTTTKGENFTETDIKMMERVVEQMCITQYQRESQAYYQRGASVILFSSPPVILLISLLIFLIVG

Annotated regions:
phrase: AGAAAAGAVVGGLGG
type: DOMAIN
name: Prion/Doppel_prot_b-ribbon_dom
description: Prion/Doppel protein, beta-ribbon domain

phrase: MSRPLIHFGNDYEDRYYRENMHRYPNQVYYRPVDQYSNQNNFVHDCVNITVKEHTVTTTTKGENFTETDIKMMERVVEQMCITQYQRESQAYYQRGASVILFSSPPVILLISLLIFL
type: DOMAIN
name: Prion/Doppel_prot_b-ribbon_dom
description: Prion/Doppel protein, beta-ribbon domain

phrase: MVKRHIGSWILVLFVVMWSDVGLCKKRPK
type: DOMAIN
name: Prion_N
description: Major prion protein N-terminal

phrase: ETDIKMMERVVEQMCITQ
type: DOMAIN
name: Prion/Doppel_prot_b-ribbon_dom
description: Prion/Doppel protein, beta-ribbon domain

phrase: WGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGGWGQGG
type: REPEAT
name: Prion_copper_b_octapeptide
description: Prion, copper binding octapeptide repeat region
Protein sequence:
MTDSTAPRLHVQALSADCAEAARRWAERLGLPLAADDEAEFAVQVGEEGLQVLQLGPDSPGPVRVDFVEGASAHRRKFGGGSGQMIAKAVGVQPGIRPRVLDATAGLGRDGFVLASLGCEVTLVERQPLIAALLEDGLERAGRDPDVAPIAARMRLLGGNSADLMRAWDGEAPQVVYLDPMFPHRDKSALVKKEMRLFRPLVGDDLDAPALLQAALALASHRVVVKRPRKAPIIEGPKPGYSLEGKSSRYDIYPKKALGKG

Annotated regions:
Protein sequence:
MDLPGPIHDFLLVFLGSGLLVGGLGVVLLPNPIFSAFSLGFVLVCISLLYILSNSHFVAAAQLLIYVGAINVLIIFAVMFMNDSEYSTDFNLWTVGNGITSLVCTTILFLLMSTILDTSWYGVIWTTRLNQILEQDLISNSQQIGIHLSTDFFLPFELISIILLVALIGAISVARQ

Annotated regions:
Protein sequence:
VGFKAGVKDYKLTYYTPEYEVKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYNIEPVAGEESQFIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPNAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYLNATAGTCEEMMKRAVFARELGVPIVMHDYLTGGFTANTTLAHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVKARNEGRDLAVEGNEIIREASKWSPELAAACEVWKEIKFEFEAMDTL

Annotated regions:
phrase: GIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYLNATAGTCEEMMKRAVFARELGVPIVMHDYLTGGFTANTTLAHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVKARNEGRDLAVEGNEIIREASKWSPELAAACEV
type: DOMAIN
name: RuBisCO_lsu_C
description: Ribulose bisphosphate carboxylase, large subunit, C-terminal

phrase: YYTPEYEVKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYNIEPVAGEESQFIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPNA
type: DOMAIN
name: RuBisCO_lsu_fd_N
description: Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal

phrase: GLDFTKDD
type: ACTIVE_SITE
name: RuBisCo_large_chain_AS
description: Ribulose bisphosphate carboxylase, large chain, active site
Protein sequence:
MVKTPMFHKKIDYISQVDERDCGVAALAMILAHYKTRLSLAKLRDLAKTDMEGTTALGIVKAANALDFETMPIQADLSLFDKKDLPYPFIAHVIKEGKYPHYYVVYGMKGDQLLIADPDNTVGKTKMTKAHFNEEWTGVSIFIAPNPTYKPTKEKKRSLTSFIPVITRQKLLVINIVIAALLVTLVSILGSYYLQGIIDTYIPNNMKNTLGIVSLGLIFAYVIQQLLSYARDYLLIVMGQRLSIDIILSYIKHIFELPMSFFATRRTGEIVSRFTDANAIIEALASTMLSVFLDLGILVIVGTVLVVQNSTLFLISLIAIPAYALVVWLFMRPFSKMNNDQMQAGSMLSSSIIEDINGVETIKALNSEATAYHKIDHEFVTYLEKSFVYAKTEAVQNAIKSLLQLSLNVVILWVGAQLVMTNKISVGQLITYNALLGFFTDPLQNIINLQTKLQQASVANNRLNEVYLVDSEFKDSHQMTEKITPNSSLVADHITYKYGFGAPAIDDVSLTITAGEKIALVGISGSGKSTLVKLLVNFFQPESGTISLGPTPLANLDKHELRGHINYLPQEPFIFSGSIMENLLLGAKPGTTQEDIIRAVEIAEIKDDIEKMSQGFGTELAESGNISGGQKQRIALARAILVDSPVLILDESTSNLDVLTEKKIIDNLMKLTEKTIIFVAHRLTISQRVDRILTMQSGKIIEDGTHDTLLKAGGFYASLFNH

Annotated regions:
phrase: IVIAALLVTLVSILGSYYLQGIIDTYIPNNMKNTLGIVSLGLIFAYVIQQLLSYARDYLLIVMGQRLSIDIILSYIKHIFELPMSFFATRRTGEIVSRFTDANAIIEALASTMLSVFLDLGILVIVGTVLVVQNSTLFLISLIAIPAYALVVWLFMRPFSKMNNDQMQAGSMLSSSIIEDINGVETIKALNSEATAYHKIDHEFVTYLEKSFVYAKTEAVQNAIKSLLQLSLNVVILWVGAQLVMTNKISVGQLITYNALLGFFTDPLQNIINLQTKLQ
type: DOMAIN
name: ABC1_TM_dom
description: ABC transporter type 1, transmembrane domain

phrase: AGEKIALVGISGSGKSTLVKLLVNFFQPESGTISLGPTPLANLDKHELRGHINYLPQEPFIFSGSIMENLLLGAKPGTTQEDIIRAVEIAEIKDDIEKMSQGFGTELAESGNISGGQKQRIALARAILVDSPVLILDESTSNLDVLTEKKIIDNLMKLTEKTIIFVAHRLTISQRVDRILTMQSG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: IDYISQVDERDCGVAALAMILAHYKTRLSLAKLRDLAKTDMEGTTALGIVKAANALDFETMPIQADLSLFDKKDLPYPFIAHVIKEGKYPHYYVVYGMKGDQLLIADPDNTVGKTKMTKAHFNEEWTGVSIFIAPN
type: DOMAIN
name: Peptidase_C39
description: Peptidase C39, bacteriocin processing

phrase: VINIVIAALLVTLVSILGSYYLQGIIDTYIPNNMKNTLGIVSLGLIFAYVIQQLLSYARDYLLIVMGQRLSIDIILSYIKHIFELPMSFFATRRTGEIVSRFTDANAIIEALASTMLSVFLDLGILVIVGTVLVVQNSTLFLISLIAIPAYALVVWLFMRPFSKMNNDQMQAGSMLSSSIIEDINGVETIKALNSEATAYHKIDHEFVTYLEKSFVYAKTEAVQNAIKSLLQLSLNVVILWVGAQLVMTNKISVGQLITYNALLGFFTDP
type: DOMAIN
name: ABC1_TM_dom
description: ABC transporter type 1, transmembrane domain

phrase: DDVSLTITAGEKIALVGISGSGKSTLVKLLVNFFQPESGTISLGPTPLANLDKHELRGHINYLPQEPFIFSGSIMENLLLGAKPGTTQEDIIRAVEIAEIKDDIEKMSQGFGTELAESGNISGGQKQRIALARAILVDSPVLILDEST
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: ISGGQKQRIALARA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: QVDERDCGVAALAMILAHYKTRLSLAKLRDLAKTDMEGTTALGIVKAANALDFETMPIQADLSLFDKKDLPYPFIAHVIKEGKYPHYYVVYGMKGDQLLIADPDNTVGKTKMTKAHFNEEWTGVSIF
type: DOMAIN
name: Peptidase_C39
description: Peptidase C39, bacteriocin processing

phrase: LVADHITYKYGFGAPAIDDVSLTITAGEKIALVGISGSGKSTLVKLLVNFFQPESGTISLGPTPLANLDKHELRGHINYLPQEPFIFSGSIMENLLLGAKPGTTQEDIIRAVEIAEIKDDIEKMSQGFGTELAESGNISGGQKQRIALARAILVDSPVLILDESTSNLDVLTEKKIIDNLMKLTEKTIIFVAHRLTISQRVDRILTMQSGKIIEDGTHDTLLKAGGFYASLFN
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain
Protein sequence:
MSDQILGVIPARFASTRFPGKPLALIGTKPMIQWTYHHASLSKSFHRLVVATDDKRIHDVVLGFGGESVLTSPDHPTGTDRIIEVAETYPNYGIIVNIQGDEPGMEASLIDGVVGLKTKHRNWEMTTAAVPFTSAEDPKDPNKVKVVFDNKGRANYFSRSPIPASFKGEAKYHRHLGIYAYERDFLMNYNQLPPSDWETVESLEQLRALQNGSTIGVYLSDKANLGVDSPADLEVVITEFKKKGLL

Annotated regions:
Protein sequence:
MGVSIVLGSQWGDEGKGKITDMLAQQATLCCRAAGGHNAGHTIVHGNKTYDFHILPSGLISPSCINLIGAGTVVHVPSFFKELASLEEKGLEGASKRIFISDRAHVCLQLHSVVDGLEEAKLGGRKVGTTGKGIGPCYSDKASRRGIRVGEILDEAVFERKLRSLDAGYRARFGDLEYNVEEELAQFKEYRKLLGPYIVDQLAFLQKYKDSPNTLVEGANALMLDLDHGTYPYVTSSSTGLGGAMQALSLNPTSIKSVIGVVKAYTTRVGSGPFPSEQFNADGDKLQSVGREFGVTTGRRRRCGWLDLVVCRYSQAINHYTALNLTKLDVLDDFDEIKVGVAYILPDGTRTENTIPADAEVLEKVKVEYVTLPGWKSNTMGVKKYEDLPDNARAYIEYIERELGGVPVKWIGTGPARDDMIARE

Annotated regions:
phrase: QWGDEGK
type: BINDING_SITE
name: Adenylosuccin_syn_GTP-bd
description: Adenylosuccinate synthase, GTP-binding site

phrase: GIGPCYSDKAS
type: ACTIVE_SITE
name: Adenylosuccin_syn_Lys_AS
description: Adenylosuccinate synthase, active site
Protein sequence:
MVDAMPENPAEEPTAASAAPNPEAVPDAVGQPEAPVKDRKVPGEYGASAITVLEGLEAVRKRPGMYIGSTGPRGLHHLVYEVVDNSVDEALAGYATGIDVTLQADGGVRVADDGRGIPVDLHPTEGRPTVEVVMTILHAGGKFGGGGYAVSGGLHGVGISVVNALSRRVDTEVRRQGHVWRMSFADGGVPQGELVKGEATDATGTVQTFYPDAEIFDSIEFDYETLRARFQQMAFLNKGLRITLTDERVQESNEVVDDEIAGEGAAGEDVAENGLAEDAEQEPQRRSVTYLYENGLLDYVQHLNSAKKVEYVHDDVIAFEAEDFSDGRSMAVEVAMQWTSAYSESVHTYANTINTHEGGTHEEGFRAALTSLVNRYAREKEILKPKEDNLSGEDIREGLTAVISVKLSEPQFEGQTKTKLGNSEARGFVSKAVTDHLGDWFERNPGPAKEIIRKAIMASHARLAARKARDNARRKSPLESFGMPGKLADCSSKDPERCEVYIVEGDSAGGSAKQGRNPETQAILPLRGKILNVERARLDKALGNAEIQSMITAFGTNIGEEFDISKLRYHKIVLMADADVDGQHITTLLLTVLFRYMRPLIEAGHVFLAQPPLYRIKWSNAPHDYVFSDEERDAAVEAGLAKGWRYPKDNGVQRYKGLGEMNYQELWDTTMDPEHRTLLQVTMEDAAAADAVFSMLMGEDVESRRTFIQQNAKDIRFLDV

Annotated regions:
phrase: CEVYIVEGDSAGGSAKQGRNPETQAILPLRGKILNVERARLDKALGNAEIQSMITAFGTNIGEEFDISKLRYHKIVLMADADVDGQHITTLLLTVLFRYMRPLIEAGHVFLAQP
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: EVYIVEGDSAGGSAKQGRNPETQAILPLRGKILNVERARLDKALGNAEIQSMITAFGTNIGEEFDISKLRYHKIVLMADADVDGQHITTLLLTVLFRYMRPLIEAGHVFLA
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: CEVYIVEGDSAGGSAKQGRNPETQAILPLRGKILNVERARLDKALGNAEIQSMITAFGTNIGEEFDISKLRYHKIVLMADADVDGQHITTLLLTVLFRYMRPLIEAGHVFLAQ
type: DOMAIN
name: TOPRIM_GyrB
description: DNA gyrase subunit B, TOPRIM domain

phrase: GLLDYVQHLNSAKKVEYVHDDVIAFEAEDFSDGRSMAVEVAMQWTSAYSESVHTYANTINTHEGGTHEEGFRAALTSLVNRYAREKEILKPKEDNLSGEDIREGLTAVISVKLSEPQFEGQTKTKLGNSEARGFVSKAVTDHLGDWFERNPGPAKEIIRKAIMASHARLAARKAR
type: DOMAIN
name: Topo_IIA_bsu_dom2
description: DNA topoisomerase, type IIA, subunit B, domain 2

phrase: TGPRGLHHLVYEVVDNSVDEALAGYATGIDVTLQADGGVRVADDGRGIPVDLHPTEGRPTVEVVMTILHAGGKFGGGGYAVSGGLHGVGISVVNALSRRVDTEVRRQGHVWRMSFADGGVPQGELVKGEATDATGTVQTFYPDAE
type: DOMAIN
name: HATPase_dom
description: Histidine kinase/HSP90-like ATPase domain

phrase: IVEGDSAG
type: CONSERVED_SITE
name: TopoIIA_CS
description: DNA topoisomerase, type IIA, conserved site

phrase: PRGLHHLVYEVVDNSVDEALAGYATGIDVTLQADGGVRVADDGRGIPVDLHPTEGRPTVEVVMTILHAGGKFGGGGYAVSGGLHGVGISVVNALSRRVDTEVRRQGHVWRMSFADGGVP
type: DOMAIN
name: HATPase_dom
description: Histidine kinase/HSP90-like ATPase domain

phrase: GVQRYKGLGEMNYQELWDTTMDPEHRTLLQVTMEDAAAADAVFSMLMGEDVESRRTFI
type: DOMAIN
name: DNA_gyrase_B_C
description: DNA gyrase B subunit, C-terminal
Protein sequence:
MKVEIDSFSGAKIYPGRGTLFVRGDSKVFRFHSSKSASLFHQRKNPRRIAWTVLYRRHHKKGITEEVAKKRSRKTVKAQRAVVGASLELIKERRSLKPEIRKAKRDEKAKADKEKKKADKAARKADKAKSAATQASKISKQQAKGAFQKVAATSR

Annotated regions:
phrase: FSGAKIYPGRGTLFVRG
type: CONSERVED_SITE
name: Ribosomal_eL24_CS
description: Large ribosomal subunit protein eL24, conserved site

phrase: MKVEIDSFSGAKIYPGRGTLFVRGDSKVFRFHSSKSASLFHQRKNPRRIAWTVLYRRHHKKGITE
type: DOMAIN
name: Ribosomal_eL24-rel_N
description: Large ribosomal subunit protein eL24-related, N-terminal

phrase: MKVEIDSFSGAKIYPGRGTLFVRGDSKVFRFHSSKSASLFHQRKNPRRIAWTV
type: DOMAIN
name: Ribosomal_eL24-rel_N
description: Large ribosomal subunit protein eL24-related, N-terminal
Protein sequence:
MSKTHFGFQTVAENEKARKVANVFDSVAAKYDLMNDLMSVGLHRAWKVFAVAQAGVRPGFKVLDLASGTGDLAKTFAKQVGDLNQGGEVWLTDINASMLRVGRDRLLDQGLIMPTLLCDAERIPFPTHYFDVVTVAFGLRNMTHKEAALAEMRRVLKPGGKLLVLEFSKIWAPLAKLYDFYSFKVLPWLGQKVAHDAQSYRYLAESIRMHPDQNALQAMMEQAGFDRVNYHNLAAGAVALHIGIKY

Annotated regions:
phrase: YDLMNDLMSVGLHRA
type: CONSERVED_SITE
name: UbiE/COQ5_MeTrFase_CS
description: UbiE/COQ5 methyltransferase, conserved site

phrase: RVLKPGGKLLVLEF
type: CONSERVED_SITE
name: UbiE/COQ5_MeTrFase_CS
description: UbiE/COQ5 methyltransferase, conserved site
Protein sequence:
MDVRGTAIRSDAGLFGYERALVRRGLGPVAGVDEAGRGACAGPMVVAAVVLDQRRLGLLRRLADSKLLTERVREEVHADVLAAAAAVSTIVIPAAEIDRNGVHVANIMGMRRAVAVLDVRPRYVLTDGFAVAGLGAESLAVIKGDLMVGCIAAASVVAKVTRDRIMRSLHKRYPEYDFAQHKGYVTAAHTAAMTRYGPCEQHRLSYVNVAALAAPAGETRSLRLEDRVAMTSLRGVTETA

Annotated regions:
phrase: GPVAGVDEAGRGACAGPMVVAAVVLDQRRLGLLRRLADSKLLTERVREEVHADVLAAAAAVSTIVIPAAEIDRNGVHVANIMGMRRAVAVLDVRPRYVLTDGFAVAGLGAESLAVIKGDLMVGCIAAASVVAKVTRDRIMRSLHKRYPEYDFAQHKGYVTAAHTAAMTRYGPCEQHRLSYVNVAALAAPAGETRSLRLE
type: DOMAIN
name: RNase_HII/HIII_dom
description: Ribonuclease HII/HIII domain

phrase: AGVDEAGRGACAGPMVVAAVVLDQRRLGLLRRLADSKLLTERVREEVHADVLAAAAAVSTIVIPAAEIDRNGVHVANIMGMRRAVAVLDVRPRYVLTDGFAVAGLGAESLAVIKGDLMVGCIAAASVVAKVTRDRIMRSLHKRYPEYDFAQHKGYVTAAHTAAMTRYGPCEQHRLSYVN
type: DOMAIN
name: RNase_HII/HIII_dom
description: Ribonuclease HII/HIII domain
Protein sequence:
MAVSDHHCGGGGRSWRFAVACGVLSRCVKAEAAAAANGRHRHHPTMLLMPGADVEPDVREEAAAAAQLKIMYGGRMLVFDDFFPAGGAVVELVRAAARAGQDVRRAGAARRRVGDSRGLDAGLPVVRKVSLQRFVEKRRRMRVYHILYTDKSSHHVPGPGRYRSWQCRIIIAAVAGAGGFVVACGVLSRCVKAEAAAAAANGRRHHHHHHTTMLLMPGADVEPDVREEAAAAAQLKIMYGGRMLVFDDFFPAGGAVVELVRAAARAGRDDDGARARRRPAGGEEGVAAAVRGEEKSQAARGDGAVHTRHSPPMLPARTPGSGRTDDAAFY

Annotated regions:
phrase: EAAAAAQLKIMYGGRMLVFDDFFPAGGAVVELVRAA
type: DOMAIN
name: Tify_dom
description: Tify domain

phrase: EAAAAAQLKIMYGGRMLVFDDFFPAGGAVVELVRAA
type: DOMAIN
name: Tify_dom
description: Tify domain

phrase: PVVRKVSLQRFVEKRRRM
type: CONSERVED_SITE
name: CCT_CS
description: CO/COL/TOC1, conserved site
Protein sequence:
MKIGAPREIFEGEARVAMTPDSALQLQKLGHHCVIETGAGMKAGFSDEAYAAAGVEVLPSAAALFEAADIVVKVRGPERAEAERLRRGQTLISFFWPAQNAELLELCKEKGATVVAMDMVPRISRAQKMDALSSMANIAGYRAVIEAGNNFGRFFTGQVTAAGKVPPAKVLVVGAGVAGLAAIGTATSLGAITYAFDVRPEVAEQIESMGAEFVYLEFEEAQDGAATGGYAAPSSPEFREKQLAKFRELAPEMDIVITTALIPGRPAPKLWTEDMVSAMKRGSVIVDLASERGGNCDLTVPDQKIVTPNGVTIVGYTDFPSRMAAQASTLYSTNIRHMLTDLTPKKDGVIHHNMEDDVIRGATVTHDGAITFPPPPPKVAAIAAAKPREKVKELTPEEKRAAEIATFRKQTVSQVAMLAVGTALLLFVGMYAPPSFMAHFIVFALACFVGFQVIWNVSHSLHTPLMAVTNAISGIVILGALLQIGSGNVLVVLLAAISVLIATINIVGGFLVTRRMLAMFQKS

Annotated regions:
phrase: AVIEAGNNFGRFFTGQVTAAGKVPPAKVLVVGAGVAGLAAIGTATSLGAITYAFDVRPEVAEQIESMGAEFVYLEFEEAQDGAATGGYAAPSSPEFREKQLAKFRELAPEMDIVITTALIPGRPAPKLWTEDMVSAMKRGSVIVDLASERGGNCDLTVPDQKIVTPNGVTIVGYTDFPSRMAAQASTLYSTNIRHMLTDLTPKKDGVIHHNMEDDVIRGATVTHDGAIT
type: DOMAIN
name: AlaDH/PNT_NAD(H)-bd
description: Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain

phrase: GAPREIFEGEARVAMTPDSALQLQKLGHHCVIETGAGMKAGFSDEAYAAAGVEVLPSAAALFEAADIVVKVRGPERAEAERLRRGQTLISFFWPAQNAELLELCKEKGATVVAMDMVPRISRAQKMDALSSMANI
type: DOMAIN
name: AlaDH/PNT_N
description: Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal

phrase: HFIVFALACFVGFQVIWNVSHSLHTPLMAVTNAISGIVILGALLQIGSGNVLVVLLAAISVLIATINIVGGFLVTRRMLAMFQ
type: DOMAIN
name: NADP_transhyd_a_C
description: NAD(P) transhydrogenase, alpha subunit, C-terminal

phrase: GAPREIFEGEARVAMTPDSALQLQKLGHHCVIETGAGMKAGFSDEAYAAAGVEVLPSAAALFEAADIVVKVRGPERAEAERLRRGQTLISFFWPAQNAELLELCKEKGATVVAMDMVPRISRAQKMDALSSMANI
type: DOMAIN
name: AlaDH/PNT_N
description: Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal

phrase: GNNFGRFFTGQVTAAGKVPPAKVLVVGAGVAGLAAIGTATSLGAITYAFDVRPEVAEQIESMGAEFVYLEFEEAQDGAATGGYAAPSSPEFREKQLAKFRELAPEMDIVITTALIPGRPAPKLWTEDMVSAMKRGSVIVDLASERGGNCDLTVPDQKIVTPNGVTIV
type: DOMAIN
name: AlaDH/PNT_NAD(H)-bd
description: Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain
Protein sequence:
MIRITERYIETEQTPVIAGVISLTYDERKRGRLRAKTQSGEDVGLFLERGKTLLDGDLLMAENGDIYTISAAPETVATAQANDPRQFAQICYHLGNRHTPLQIGELWVRFQPDHVLEDLCRLYGLDVVRESAPFNPENGAYGGHSGHSGHSGHSGHHHGHDHSHEQSRQDAKELSARYHFHAPDHEHPHGHVHLHAHPHEH

Annotated regions:
phrase: ITERYIETEQTPVIAGVISLTYDERKRGRLRAKTQSGEDVGLFLERGKTLLDGDLLMAENGDI
type: DOMAIN
name: UreE_N
description: UreE urease accessory, N-terminal

phrase: ETVATAQANDPRQFAQICYHLGNRHTPLQIGELWVRFQPDHVLEDLCRLYGLDVVRESAPFNPENGAYGGHSGHSGHSGHSGHHHGHDHS
type: DOMAIN
name: UreE_C_dom
description: Urease accessory protein UreE, C-terminal domain

phrase: GVISLTYDERKRGRLRAKTQSGEDVGLFLERGKTLLDGDLLMAENG
type: DOMAIN
name: UreE_N
description: UreE urease accessory, N-terminal
Protein sequence:
MKWLKKQAELYPQKQFLNDSTFAQINQEVNKMAEHLAPLIDNQSRVALLSENSVEMAVVLFALLGLSKEVLLLNRHLTEYELADQIKELKIDKVFTSDLLTEKVTDSISFSEIWTSNPCPVSLSADFPDEKIAVIMNTSATTGKFKSVPITWGMISNHVKASKETLGAYDNDNWLVILPMFHVSGLSIIMRTLYNATSATVVDKFDENQLLEMINSGKINMVSLVPTLLTRIADKLHSNNLRLILLGGEFIPQPLIKKCQELGLPIYKTYGMTESFSQSVTFNILDFPDKTSSVGRPLPGVEIEIRQADLAGVGEIWLKSPMLMKAYLGQKPYGTAFETGDIGYLDTDGFLYLLNRRKDIIISGGENIYPKEIEDLVYSLPEIKECALVAKPDAKWGQVPILFVSGNISQEKLENFLTEKLAKYKRPQSITFMDELPKNASGKILRKELKG

Annotated regions:
phrase: KKQAELYPQKQFLNDSTFAQINQEVNKMAEHLAPLIDNQSRVALLSENSVEMAVVLFALLGLSKEVLLLNRHLTEYELADQIKELKIDKVFTSDLLTEKVTDSISFSEIWTSNPCPVSLSADFPDEKIAVIMNTSATTGKFKSVPITWGMISNHVKASKETLGAYDNDNWLVILPMFHVSGLSIIMRTLYNATSATVVDKFDENQLLEMINSGKINMVSLVPTLLTRIADKLHSNNLRLILLGGEFIPQPLIKKCQELGLPIYKTYGMTESFSQSVTFNILDFPDKTSSVGRPLPGVEIEIRQADLAGVGEIWLKSPMLMKAY
type: DOMAIN
name: AMP-dep_synth/lig_dom
description: AMP-dependent synthetase/ligase domain

phrase: EIEDLVYSLPEIKECALVAKPDAKWGQVPILFVSGNISQEKLENFLTEKLAKYKRPQSITFMDELPKNASG
type: DOMAIN
name: AMP-bd_C
description: AMP-binding enzyme, C-terminal domain
Protein sequence:
MLPKVALLIPAAGSGERFGAPIPKALVQLSGRTLIEHAVLNLGPVASQIIVAAPAGFEDKFREILGDSVTVVTGGSTRTKSVKIALESVASDIEFILVHDAARPLASAQLGESILAALAGGEVAVIPALSVADTIKEVDASNYVVATPNRERLRAVQTPQGFARETLIKAHMQNIEATDDGALVEAMRGKVKLIAGEERALKITNPQDLASALKYLTATTASEIRSGVGVDAHAFSSDPKRPLWLAGLLWDNEVGVDGHSDGDVAAHAICDALFAAANIGDLGSNFGTSKPEYAGASGAKLLDETLKLVTAAGFVIQNVAVQIVGNRPKIGPRRLDAIAKISQALGGAQVSVSATTTDGLGLTGEGKGIGAIATALIVRSGS

Annotated regions:
phrase: SDGDVAAHAICDALF
type: CONSERVED_SITE
name: MECDP_synthase_CS
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site

phrase: RSGVGVDAHAFSSDPKRPLWLAGLLWDNEVGVDGHSDGDVAAHAICDALFAAANIGDLGSNFGTSKPEYAGASGAKLLDETLKLVTAAGFVIQNVAVQIVGNRPKIGPRRLDAIAKISQALGGAQVSVSATTTDGLGLTGEGKGIGAIATALI
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: IRSGVGVDAHAFSSDPKRPLWLAGLLWDNEVGVDGHSDGDVAAHAICDALFAAANIGDLGSNFGTSKPEYAGASGAKLLDETLKLVTAAGFVIQNVAVQIVGNRPKIGPRRLDAIAKISQALGGAQVSVSATTTDGLGLTGEGKGIGAIATAL
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: ILVHDAA
type: CONSERVED_SITE
name: ISPD_synthase_CS
description: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site

phrase: IRSGVGVDAHAFSSDPKRPLWLAGLLWDNEVGVDGHSDGDVAAHAICDALFAAANIGDLGSNFGTSKPEYAGASGAKLLDETLKLVTAAGFVIQNVAVQIVGNRPKIGPRRLDAIAKISQALGGAQVSVSATTTDGLGLTGEGKGIGAIATALIV
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RSGVGVDAHAFSSDPKRPLWLAGLLWDNEVGVDGHSDGDVAAHAICDALFAAANIGDLGSNFGTSKPEYAGASGAKLLDETLKLVTAAGFVIQNVAVQIVGNRPKIGPRRLDAIAKISQALGGAQVSVSATTTDGLGLTGEGKGIGAIATAL
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase