nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MRVKGMKKTCQHLWKWGILLLGMLMISSAEEKLWVTVYYGVPVWKEATTTLFCASDARAYSTEKHNVWATHACVPTDPSPREVVLENVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTDGWGNNTKATNSSPTSATTSNPTNATNSSLEMKIEEIKNCSFNTTTIADKRHKEYALFYKLDVIKIDGDNANNSYTNYRLINCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNGSGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSENFTNNAKTILVHLNETVNITCTRPHNNTRKSIHIAPGRAFYATEDIIGDIRQAHCNISKANWTNTLRLVSTKLQEQFENKTIVFKPPSGGDPEIVMHNFNCGGEFFYCNTTQLFNSDWPWNSTNSTGGSNSTEGDDTIILQCRIKQIINMWQEVGKAMYAPPIRGQIKCVSNITGLLLTRDGGNVNNTNNNTEIFRPGGGDMRENWRSELYKYKVVKIEPLGVAPTKAKRRVVQREKRAVGTLGAMFLGFLGAAGSTMGAASMTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLQDQQLLGLWGCSGKLICTTTVPWNTSWSKNWSNNLSKIWDNMTWMQWEKEIDNYTQIIYSLIEDSQNQQEKNEQELLELDKWASLWNWFNITQWLWYIKIFIMIVGGLIGLRIVCTIISIVSRVRQGYSPLSFQTRLPTQREPDRPEGIEGEGGERDRDR

Annotated regions:
phrase: MGAASMTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLQDQQLLGLWGCSGKLICTTTVPWNTSWSKNWSNNLSKIWDNMTWMQWEKEIDNYTQIIYSLIEDSQNQQEKNEQELLELDKWASLWNWFNITQWLWYIKIFIMIVGGLIGLRIVCTIISIVSRVRQGYSPLSFQ
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKEATTTLFCASDARAYSTEKHNVWATHACVPTDPSPREVVLENVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTDGWGNNTKATNSSPTSATTSNPTNATNSSLEMKIEEIKNCSFNTTTIADKRHKEYALFYKLDVIKIDGDNANNSYTNYRLINCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKKFNGSGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSENFTNNAKTILVHLNETVNITCTRPHNNTRKSIHIAPGRAFYATEDIIGDIRQAHCNISKANWTNTLRLVSTKLQEQFENKTIVFKPPSGGDPEIVMHNFNCGGEFFYCNTTQLFNSDWPWNSTNSTGGSNSTEGDDTIILQCRIKQIINMWQEVGKAMYAPPIRGQIKCVSNITGLLLTRDGGNVNNTNNNTEIFRPGGGDMRENWRSELYKYKVVKIEPLGVAPTKAKRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: VQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLQDQQLLGLWGCSGKLICTTTVPWNTSWSKNWSNNLSKIWDNMTWMQWEKEIDNYTQIIYSLIEDSQNQQEKNEQELLELD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MSYFPWLTIIVVFPISAGLSIFFLPHRGNKVVRWYTICICLLELLLMTYVFCYHFQLNDPLIQLDEDYEWINIFDFHWRPGIDGLSIGPILLTGFITTLATLAAWPVTRDSRLFHFLMLAMYSGQIGLFSSRDLLLFFLMWELELIPVYLLLSMWGGKKRLYSATKFILYTAGGSVFLLMGVPGMGLYGSNEPTLNFETSANQSYPVSLEILFYFGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLVLAGTLQIIYAASTSLGQVNLKKRIAYSSVSHMGFTIIGIGSITDTGLNGAILQLLSHGFLGAALFFLAGTSCDRIRLIYLDEMGGISIPMPKIFTMFSSFSMASLALPGMSGFVAEAVVFFGIITSQKFLFLPKILITFVMAIGMILTPIYLLSMLRQIFYGYKLFNMTNSYFMDSGPRELFVSICIFLPVIGIGIYPDFVLSLSVDKVEAILSNYFYR

Annotated regions:
phrase: SRDLLLFFLMWELELIPVYLLLSMWGGKKRLYSATKFILYTAGGSVFLLMGVPGMGLYGSNEPTLNFETSANQSYPVSLEILFYFGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLVLAGTLQIIYAASTSLGQVNLKKRIAYSSVSHMGFTIIGIGSITDTGLNGAILQLLSHGFLGAALFFLAGTSCDRIRLIYLDEMGGISIPMPKIFTMFSSFSMASLALPGMSGFVAEAVVFFGIITSQKFLF
type: DOMAIN
name: ND/Mrp_TM
description: NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domain
Protein sequence:
MDTKAFKRSLQQSENYHRKGFGQEDEAMGVMNSEYQSSLIQEIRNNNYRLTQGDVTIRLAEAFGFCWGVERAVAMSYETRQHFPNQRIWLTNEVIHNPSVNQRLRDMKVEFIPVIEDQKDFSVVERDDVVILPAFGASVTEMQLLNDKGCTIVDTTCPWVAKVWNSVEKHKKRNYTSIIHGKYKHEETVATSSFAGTYLVVLNMEQAKYVCNYILNGGDKQEFLAKFKKAYSEGFDPDTDLERVGIANQTTMLKSETEEIGKLFEHTMLKKYGPLDLNNHFMSFNTICDATQERQDAMLDLVKEKLDLMVVIGGFNSSNTTHLQEISIHHGIVSYHIDSAARIDLNNHIEHKPLGKDLEVKENWLPDGKIVVGVTSGASTPDIVVEQVLQKIFAIKSAVAMV

Annotated regions:
Protein sequence:
MAAPLALVLVVAVTVRAALFRSSLAEFISERVEVVSPLSSWKRVVEGLSLLDLGVSPYSGAVFHETPLIIYLFHFLIDYAELVFMITDALTAIALYFAIQDFNKVVFKKQKLLLELDQYAPDVAELIRTPMEMRYIPLKVALFYLLNPYTILSCVAKSTCAINNTLIAFFILTTIKGSVFLSAIFLALATYQTLYPVTLFAPGLLYLLQRQYIPVKVKSKAFWIFSWEYAMMYIGSLVVIVCLSFFLLSSWDFIPAVYGFILSVPDLTPNIGLFWYFFAEMFEHFSLFFVCVFQINVFFYTVPLAIKLKEHPIFFMFIQIAIISIFKSYPTVGDVALYMAFFPVWNHLYRFLRNVFVLTCIIVVCSLLFPVLWHLWIYAGSANSNFFYAITLTFNVGQILLISDYFYAFLRREYYLTHGLYLTAKDGTEAMLVLK

Annotated regions:
Protein sequence:
MTTNPDIVKQTKNEIHQVTSRVQEKLDSKSTNAVEQNNNSSQASVTKDNKKKAAKRAKKKAAKKKKQSAAASASSTPVEEAQHAQEEQQEQTILQEPGFTQTIVEKDADQVDEPLEPIASSALGTVEPPTDNKPSASTSTAVPTTEARNTSITEPANSPSSSSSSASTKSTATTQSADYVVAEHFAPQRNDEQLGNSPASITSKPATTSAAQPSSKVEENMAKATSQPITTAEKEIPELKPIEPEAIMISKEINTTHDQAAATTTAAVASASTTATAESHAVADGIMNDNVLESIGENVQQETVFEDASDIPHADVIPHTTTVTVEEESPIALGQGGVTHEATTSARASASGIPGAFEEVQQTVQEDLPHPTAETVEIARFAEQPVRAQQPEQYESSVVQEATETVTDVGKGVSSTVKNEVNVPSTIPTESENPVAVGGTTAEHPVQEAVTAPTETAHDFSKETTTASKRVSKHDKASAEKHKVARKPSSTGQEPTTPSTPAKSAQSSKHARRPSKQASAPSSPGTTSAAVPGGKKSAIEAAAPIPTSADTVESKHAAGSGSATTIPSPGSATTKPTPGSATTKPTPVSATEEHAAGTTKPAPAAGATATAENETADGKAQTATDGEAAPKKSWFKRMKKSFGKLFH

Annotated regions:
Protein sequence:
MKPSERICAALDFPTFAAAEPFARAVAPEVGLLKVGLELFAAEGPAAVRAAARLGRPVFLDLKLHDIPNTVEGAARSAAASGAALLTVHAAGGAEMVKAAVRGAGPGVRVLAVTVLTSLDAAALDAVGLAGPPEAAVVRLARLAVGAGAGGIVCSPHEVAAVRAAVGPGPLLVVPGVRPAGAAKGDQARVATPAEAVRAGADVIVVGRPLRDAPDPAAAARAIAAGL

Annotated regions:
phrase: RICAALDFPTFAAAEPFARAVAPEVGLLKVGLELFAAEGPAAVRAAARLGRPVFLDLKLHDIPNTVEGAARSAAASGAALLTVHAAGGAEMVKAAVRGAGPGVRVLAVTVLTSLDAAALDAVGLAGPPEAAVVRLARLAVGAGAGGIVCSPHEVAAVRAAVGPGPLLVVPGVRPAGAAKGDQARVATPAEAVRAGADVIVVGRPLRDAPDPAAAARA
type: DOMAIN
name: OMPdeCOase_dom
description: Orotidine 5'-phosphate decarboxylase domain

phrase: VFLDLKLHDIPNT
type: ACTIVE_SITE
name: OMPdecase_AS
description: Orotidine 5'-phosphate decarboxylase, active site

phrase: RICAALDFPTFAAAEPFARAVAPEVGLLKVGLELFAAEGPAAVRAAARLGRPVFLDLKLHDIPNTVEGAARSAAASGAALLTVHAAGGAEMVKAAVRGAGPGVRVLAVTVLTSLDAAALDAVGLAGPPEAAVVRLARLAVGAGAGGIVCSPHEVAAVRAAVGPGPLLVVPGVRPAGAAKGDQARVATPAEAVRAGADVIVVGRPLRDAPDPAAAARA
type: DOMAIN
name: OMPdeCOase_dom
description: Orotidine 5'-phosphate decarboxylase domain
Protein sequence:
MIRDGNEGMYTIPGFNQIQFEGFCRFINQGLMEELHKFPKIEDTDQEIEFQLFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLIWKTSRAMQEQTIFIGNIPLMNSLGTSIINGIYRIVINQILQNPGVYYRSELDHNGISVYTSTIISDWGGRLELEIDRKARIWARVSRKQKISILVLLSAMGSNLREILDNVCYPEIFLSFPNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNTNQRLNLDIPQKNTFLLPRDVLAAADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENGVRGTICGAIRHKLIPNPKNLVTSTSFTTTYESFFGLHPLSQVLDRTNPLTQIAHGRRLSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHVRIGHWGSIESPFYEISERSKKAQMIYLSPSRDEYYMVAAGNSLALNRGIQEEQVVPARYRQEFLTIAWEQIHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQTALDSGVSAIAEREGKIIYTDTHKIIFSSNGDTMSIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILADGATTVGGELALGKNVLVAHMPWEGYNSEDAVLISERLVYEDIYTSFYIRKYEIQTHVTSQGPERITKEIPHLEDHLLRNLDRNGIVMLGSWIETGDILVGKLTPQTATESSYAPEDRLLRAILGIQVSTAKETSLKLSIGGRGRVIDVRWIQKRGGSIYNPEMIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLKRHYRIAPFDERYEQEASRKLVFSELYSASKQTKNPWVFEPEYPGKSRIFDGRTGDPFEQPVLIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGATIVGGTVPNPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA

Annotated regions:
phrase: QVLDRTNPLTQIAHGRRLSYLGPGGLTGRTASFRIRDIHPSHYGRICPIDTSEGINVGLIGSLAIHVR
type: DOMAIN
name: RNA_pol_Rpb2_3
description: RNA polymerase Rpb2, domain 3

phrase: IAEREGKIIYTDTHKIIFSSNGDTMSIPLVMYQRSNKNTCMHQKPQVPRGKCIKKGQILADGATTVGGELALGKNVLVAHMPWEGYNSEDAVLISERLVYEDIYTSFYIRKYEIQTHVTSQGPERITKEIPHLEDHLLRNLDRNGIVMLGSWIETGDILVGKLTPQTATESSYAPEDRLLRAILGIQVSTAKETSLKLSIGGRGRVIDVRWIQKRGGSIYNPEMIRVYISQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDLLKRHYRIAPFDERYEQEASRKLVFSELYSASKQTKNPWVFEPEYPGKSRIFDGRTGDPFEQPVLIGKPYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRA
type: DOMAIN
name: DNA-dir_RNAP_su2_dom
description: DNA-directed RNA polymerase, subunit 2, hybrid-binding domain

phrase: GDKVAGRHGNKG
type: CONSERVED_SITE
name: RNA_pol_bsu_CS
description: RNA polymerase, beta subunit, conserved site

phrase: NPGVYYRSELDHNGISVYTSTIISDWGGRLELEIDRKARIWARVSRKQKISILVLLSAMGSNLREILDNVCYPEIFLSFPNDKEKKKIGSKENAILEFYQQFACVGGDPVFSESLCKELQKKFFQQRCELGRIGRRNTNQRLNLDIPQKNTFLLPRDVLAAADHLIRMKFGMGTLDDMNHLKNKRI
type: DOMAIN
name: RNA_pol_Rpb2_2
description: RNA polymerase Rpb2, domain 2

phrase: GGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRARQEVLGATIVGGTVPNPEDAPESFRLLVRELRSLALELNH
type: DOMAIN
name: RNA_pol_Rpb2_7
description: RNA polymerase Rpb2, domain 7
Protein sequence:
MRARGTRRNCQHLWKWGTMLLGLLMICSATEQLWVTVYYGVPVWKEATTTLFCASDAKAYETEAHNVWATHACVPTDPNPQELLLENVTENFNMWKNGMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTDVNNTNTTTNSTSGNNTATNSSNWSHMEPGEIKNCSFNVTTGMRDKMQQAYALLYKLDIESIDNNKTSYRLISCNNSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKMFNGTGPCKNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSANFSDNAKVIIVHLNESVIINCTRPNNNTEKRVTLGPGKVWYTTGKIVGDIKRAHCNISKAAWKKTLEKVVAKLGEQFGDKTINFTESSGGDPEIVAHSFNCGGEFFYCNTLKLFNSNWTFDNQTWNTSHIESNDNEENITLPCRIRQIVNMWQEVGKAMYAPPISGQIRCVSTITGLLLTRDGGNGTNNTETFRPGGGDMRDNWRSELYKYKVVRIEPLGVAPTKAQRRVVQREKRAVGMLGAMFLGFLGAAGSTMGAASITLTVQARQLMSGIVQQQNNLLKAIEAQQHMLQLTVWGIKQLQARVLALERYLQDQQLLGIWGCSGKLICTTTVPWNTSWSNRSLEKIWHNMTWMEWEREIDNYTGLIYTLLEESQIQQEKNEQDLLALDKWASLWNWFNITHWLWYIKIFIMIVGGLIGLRIVFAVLSIVNRVRQGYSPLSLQTLLPTTRGPDRPEGIEEEGGGRDNGRSIRLVDGFLAIFWD

Annotated regions:
phrase: VQARQLMSGIVQQQNNLLKAIEAQQHMLQLTVWGIKQLQARVLALERYLQDQQLLGIWGCSGKLICTTTVPWNTSWSNRSLEKIWHNMTWMEWEREIDNYTGLIYTLLEESQIQQEKNEQDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKEATTTLFCASDAKAYETEAHNVWATHACVPTDPNPQELLLENVTENFNMWKNGMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTDVNNTNTTTNSTSGNNTATNSSNWSHMEPGEIKNCSFNVTTGMRDKMQQAYALLYKLDIESIDNNKTSYRLISCNNSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKMFNGTGPCKNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSANFSDNAKVIIVHLNESVIINCTRPNNNTEKRVTLGPGKVWYTTGKIVGDIKRAHCNISKAAWKKTLEKVVAKLGEQFGDKTINFTESSGGDPEIVAHSFNCGGEFFYCNTLKLFNSNWTFDNQTWNTSHIESNDNEENITLPCRIRQIVNMWQEVGKAMYAPPISGQIRCVSTITGLLLTRDGGNGTNNTETFRPGGGDMRDNWRSELYKYKVVRIEPLGVAPTKAQRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: MGAASITLTVQARQLMSGIVQQQNNLLKAIEAQQHMLQLTVWGIKQLQARVLALERYLQDQQLLGIWGCSGKLICTTTVPWNTSWSNRSLEKIWHNMTWMEWEREIDNYTGLIYTLLEESQIQQEKNEQDLLALDKWASLWNWFNITHWLWYIKIFIMIVGGLIGLRIVFAVLSIVNRVRQGYSPLSLQ
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MSLSETATQAPQPANVLLEVNDLRVTFATPDGDVTAVNDLNFTLRAGETLGIVGESGSGKSQTAFALMGLLATNGRIGGSATFNGREILNLPERELNTLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGKARDVFYQPVHPYSIGLLNAVPRLDSEGAEMLTIPGNPPNLLRLPKGCPFQPRCPHAMEICNNAPPLEAFSPGRLRACFKPVEELL

Annotated regions:
phrase: AGETLGIVGESGSGKSQTAFALMGLLATNGRIGGSATFNGREILNLPERELNTLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGKA
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LEVNDLRVTFATPDGDVTAVNDLNFTLRAGETLGIVGESGSGKSQTAFALMGLLATNGRIGGSATFNGREILNLPERELNTLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGKARDVFYQPVHPYSIGL
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: MEYGKARDVFYQPVHPYSIGLLNAVPRLDSEGAEMLTIPGNPPNLLRLPKGCPFQPRCPHAMEI
type: DOMAIN
name: Oligopep_ABC_C
description: Oligopeptide/dipeptide ABC transporter, C-terminal

phrase: VNDLNFTLRAGETLGIVGESGSGKSQTAFALMGLLATNGRIGGSATFNGREILNLPERELNTLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPT
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: MEYGKARDVFYQPVHPYSIGLLNAVPRLDSEGAEMLTIPGNPPNLLRLPKGCPFQPRCPHAMEICNNAPPLEAFSPGRLRAC
type: DOMAIN
name: Oligopep_ABC_C
description: Oligopeptide/dipeptide ABC transporter, C-terminal

phrase: FSGGMRQRVMIAMA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site
Protein sequence:
MQIFDSVKKQKVAFEPIKSGKASIYLCGPTVYDDAHLGHAKSAVSFDLLRRVLLELGYEVKFVRNYTDIDDKILKKMSDTGKSLEEITQRYIASYEADMSALNVMQPDIKPKATQCLEAIINYIQKLVDKGVAYELKDGIYFDTGKDARYFSLSGKDNNTDLIARVQSNDEKRDEKDFVLWKFDDKWYESPFGRGRPGWHSECVAMIKQYLSNDGEYEIDIHAGGIDLLFPHHENEAAQCRCAEHKKLAKYWMHNGFIKVNNEKMSKSLGNSFFVKDALKSVPGEALRFYLIASHYRAHFNYSQEDLFAAKKRLDKIYRLKKRVLGVSAGTCEPNFKASVLEALSDDLNTSKALASVDEFVKSANDGLDLDPKNKALKAQIAANLEFITRVFGVGAMDGFEYFQFGVSDDEKAKIKALLDERTQAKKERNFSKADEIRKKLNAMDIAIMDTAQGTMWEKI

Annotated regions:
phrase: FEPIKSGKASIYLCGPTVYDDAHLGHAKSAVSFDLLRRVLLELGYEVKFVRNYTDIDDKILKKMSDTGKSLEEITQRYIASYEADMSALNVMQPDIKPKATQCLEAIINYIQKLVDKGVAYELKDGIYFDTGKDARYFSLSGKDNNTDLIARVQSNDEKRDEKDFVLWKFDDKWYESPFGRGRPGWHSECVAMIKQYLSNDGEYEIDIHAGGIDLLFPHHENEAAQCRCAEHKKLAKYWMHNGFIKVNNEKMSKSLGNSFFVKDALKSVPGEALRFYLIASHYRAHFNYSQEDLFAA
type: DOMAIN
name: tRNA-synt_1_cat_dom
description: tRNA synthetases class I, catalytic domain

phrase: SVLEALSDDLNTSKALASVDEFVKSANDGLDLDPKNKALKAQIAANLEFITRVFGVGAMDGFEY
type: DOMAIN
name: Cys-tRNA-synt_Ia_DALR
description: Cysteinyl-tRNA synthetase, class Ia, DALR

phrase: VLEALSDDLNTSKALASVDEFVKSANDGLDLDPKNKALKAQIAANLEFITRVFG
type: DOMAIN
name: Cys-tRNA-synt_Ia_DALR
description: Cysteinyl-tRNA synthetase, class Ia, DALR

phrase: DEKAKIKALLDERTQAKKERNFSKADEIRKKLNAMDIAIMDTAQGTM
type: DOMAIN
name: CysS_C
description: Cysteinyl-tRNA ligase, anticodon binding domain

phrase: QIFDSVKKQKVAFEPIKSGKASIYLCGPTVYDDAHLGHAKSAVSFDLLRRVLLELGYEVKFVRNYTDIDDKILKKMSDTGKSLEEITQRYIASYEADMSALNVMQPDIKPKATQCLEAIINYIQKLVDKGVAYELKDGIYFDTGKDARYFSLSGKDNNTDLIARVQSNDEKRDEKDFVLWKFDDKWYESPFGRGRPGWHSECVAMIKQYLSNDGEYEIDIHAGGIDLLFPHHENEAAQCRCAEHKKLAKYWMHNGFIKVNNEKMSKSLGNSFFVKDALKSVPGEALRFYLIASHYRAHFNY
type: DOMAIN
name: tRNA-synt_1_cat_dom
description: tRNA synthetases class I, catalytic domain
Protein sequence:
MSEFLPFSRPAMGSEELAAVEEVLRSGWITTGPKNQQLEQAFCRLTGNRHAIAVCSATAGMHVALMALGIGPGDEVITPSLTWVSTLNMIALLGATPVMIDVDRDTLMVTPELIEAAITERTRAIVPVHYAGAPADIDAVHALGKRHGIAVIDDAAHAAGTYYRGRHVGESGTAIFSFHAIKNMSCAEGGMIVTDDDALADRMRSLKFHGLGVDAFDRQTHGRAPQAEVLTPGYKYNLADINAAIALVQLDKLAAHNARREQIAQRYLSELADTPFLPLARPAWPHQHAWHLFILRVDRESCGLSRDELMQQLKEQGIGTGLHFRAAHTQKYYRDRFPQLSLPETEWNSERICSIPLFPGMSDGDCDRVIAALRTLAER

Annotated regions:
Protein sequence:
MRTDELDYELPQELIAQRPAEPRDASRLMVVDVPSRGISHHVFRELPRFLGPGDVLVLNETKVIPARLFASRPGGGEVELLFLGERGGAWEALARPSRRLRPGMPLSAGEGERLEVVEELGEGRWLVRGRDVPGLLERAGRMPLPPYIEPTPEAEASYQTVYARTPGSAAAPTAGFHFTGRVLRGVEEAGARIARVVLHVGLGTFAPVREERLEDHRMHREYYAVPEETARAVEEAERVVAVGTTVVRTLESWARSGVREGESELFIYPGYEWRAVDALITNFHLPRSTLLALVMSFAGRELVREAYEVAVRERYRFYSFGDAMLLLGGGRSLR

Annotated regions:
Protein sequence:
MVDLAGLELKELEDFVESLGHRRFHAKQLYRWIWKRGVTDFAQMTNLGRDLRAALGTAATVSTPEVVRRDVSEDGTQKFVLRMADGRQIESVFIPDTPAQTFCVSTQVGCAMGCAFCLTGRMGLVRNLSAAEITAQVRLLARTLDLLDKSFNIVLMGMGEPLHNYDATMKALRMLNEPVGLALHPKRITLSTVGLVPMMDKLAQEPLMPNLAVSLHAATEETRGAIVPLNRKYSMQDVIDACKRFPLAKRRRIMFEYVMLAGVNDSNEDARKLVKVLAGVKAKVNLLPLNAAAGIPFERPDDARVNEFAKILVDRGLMVSVRKSRGRDIRAACGQLIVEGQGRQSAAQRLAAEL

Annotated regions:
phrase: DTPAQTFCVSTQVGCAMGCAFCLTGRMGLVRNLSAAEITAQVRLLARTLDLLDKSFNIVLMGMGEPLHNYDATMKALRMLNEPVGLALHPKRITLSTVGLVPMMDKLAQEPLMPNLAVSLHAATEETRGAIVPLNRKYSMQDVIDACKRFPLAKRRRIMFEYVMLAGVNDSNEDARKLVKVLAGVKAKVNLLPLNAAAGIPFERPDDARVNEFAKILVDRGLMVSVRKSRGR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VDLAGLELKELEDFVESLGHRRFHAKQLYRWIWKRGVTDFAQMTNLGRDLRAALGTAA
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: STQVGCAMGCAFCLTGRMGLVRNLSAAEITAQVRLLARTLDLLDKSFNIVLMGMGEPLHNYDATMKALRMLNEPVGLALHPKRITLSTVGLVPMMDKLAQEPLMPNLAVSLHAATEETRGAIVPLNRKYSMQDVIDACKRFPLAKRRRIMFEYVMLAGVNDSNEDAR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VDLAGLELKELEDFVESLGHRRFHAKQLYRWIWKRGVTDFAQMTNLGRDLRAALGTAATVSTPEVVRRDVSEDGTQKFVLRMADGRQIESVFIPDTPAQTFCVSTQVGCAMGCAFCLTGRMGLVRNLSAAEITAQVRLLARTLDLLDKSFNIVLMGMGEPLHNYDATMKALRMLNEPVGLALHPKRITLSTVGLVPMMDKLAQEPLMPNLAVSLHAATEETRGAIVPLNRKYSMQDVIDACKRFPLAKRRRIMFEYVMLAGVNDSNEDARKLVKVLAGVKAKVNLLPLNAAAGIPFERPDDARVNEFAKILVDRGLMVSVRKSRGRDIRAACGQLIVEGQGRQSA
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MAEVKPVTAVFPGTFDPFTRGHFSLVMRGIKTFHKVIVAVAGSTSKNTKFSLEERVDMAKRIFEHHPQVEVDSFDGLLVHYVEQSPANVIMRGLRAVSDFEYEFQMALMNRRLDNDIQTVFLMTDYKWMYLSSSIIKDVAVNGGDIKGLVPRQIYDEVIERLVPGK

Annotated regions:
phrase: VFPGTFDPFTRGHFSLVMRGIKTFHKVIVAVAGSTSKNTKFSLEERVDMAKRIFEHHPQVEVDSFDGLLVHYVEQSPANVIMRGLRAVSDFEYEFQMALMNRRLDNDIQTVFLMTDYKWMYLSSSIIK
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: AVFPGTFDPFTRGHFSLVMRGIKTFHKVIVAVAGSTSKNTKFSLEERVDMAKR
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain
Protein sequence:
MTGSIWAIVPAAGRGTRFGGPLPKQYLPAGGQPLMAYTLAALAAHPALAGIMVAIAPGDADWPGWTAVQSTPVLTCLGGASRAASVLAGLLALPESVRADDFVLVHDAARPNLALADLDRLLEIGRGDPVGAILAAPVRDTLKRAGDDGGIDGTEPRERLWRALTPQLFRRHQLIRGLTEAAAAGVEVTDEAMAMERMGLRPLLVEGAEDNFKVTTPADLARFEFELVNRGLGARDPESAHPQSSVLASAFSGPGSRVSGPEEI

Annotated regions:
phrase: VLVHDAA
type: CONSERVED_SITE
name: ISPD_synthase_CS
description: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site
Protein sequence:
MRILFLGTPSFASEHLEFLIKNNFDVVAVISQPDKPKGRGKKVQPTPVKEVAQKYNIPVFQPTKLTSEGLSIIERYKPDLGIVVAYGKLLKPPFLNAIPFYNIHASLLPKYRGAAPIQRALENGESVTGITIFKIGEGMDDGPIALKKEISVGEFETFGSLYEKLLSLGKEALLEFLNNYPPNLYPQEGVPTYAPKISKEDLELDFSADYVTVKNKIRAYDPIPGVRSVLKGKIVKLFQVFYVEADENIKEYGKVLKINNEGGFISAKGGIVGIKYIQFPGKKPITFLDAKNGGLVKEGDKFES

Annotated regions:
phrase: KISKEDLELDFSADYVTVKNKIRAYDPIPGVRSVLKGKIVKLFQVFYVEADENIKEYGKVLKINNEGGFISAKGGIVGIKYIQFPGKKPITFLDAK
type: DOMAIN
name: Formyl_trans_C
description: Formyl transferase, C-terminal

phrase: MRILFLGTPSFASEHLEFLIKNNFDVVAVISQPDKPKGRGKKVQPTPVKEVAQKYNIPVFQPTKLTSEGLSIIERYKPDLGIVVAYGKLLKPPFLNAIPFYNIHASLLPKYRGAAPIQRALENGESVTGITIFKIGEGMDDGPIALKKEISVGEFETFGSLYEKLLSLGKEALLEFLNNYPPNLYPQEGVPTYAPK
type: DOMAIN
name: Met-tRNA-FMT_N
description: Methionyl-tRNA formyltransferase, N-terminal domain

phrase: EDLELDFSADYVTVKNKIRAYDPIPGVRSVLKGKIVKLFQVFYVEADENIKEYGKVLKINNEGGFISAKGGIVGIKYIQFPGKKPI
type: DOMAIN
name: Met-tRNA-FMT_C
description: Methionyl-tRNA formyltransferase, C-terminal domain

phrase: MRILFLGTPSFASEHLEFLIKNNFDVVAVISQPDKPKGRGKKVQPTPVKEVAQKYNIPVFQPTKLTSEGLSIIERYKPDLGIVVAYGKLLKPPFLNAIPFYNIHASLLPKYRGAAPIQRALENGESVTGITIFKIGEGMDDGPIALKKEISVGEFETFGSLYEKLLSLGKEALL
type: DOMAIN
name: Formyl_transf_N
description: Formyl transferase, N-terminal
Protein sequence:
MTPAPARDPDHLTLALPKGRILEDAVTLLARAGLPLTLPEKSRALRHEFPGVTVLELRNQDVPVYVDLGVADAGIVGKDVLIESGRAVYEPVDLRFAACHLSLIREVGASGPIGRVATKYPRSARAYLASRGIPAEVVKLSGNIELAALTGLADAVVDLVQTGSTLRANHLEEIDVLYHSSARLIVNRAALKLRRARLRPLIERLRELVERDAQEGTGNL

Annotated regions:
phrase: ELAALTGLADAVVDLVQTGST
type: CONSERVED_SITE
name: ATP_PRibTrfase_CS
description: ATP phosphoribosyltransferase, conserved site

phrase: RNQDVPVYVDLGVADAGIVGKDVLIESGRAVYEPVDLRFAACHLSLIREVGASGPIGRVATKYPRSARAYLASRGIPAEVVKLSGNIELAALTGLADAVVDLVQTGSTLRANHLEEIDVLYHSSARLIVNRAALKLRRARLRPLIERL
type: DOMAIN
name: ATP_PRibTrfase_cat
description: ATP phosphoribosyltransferase, catalytic domain

phrase: LTLALPKGRILEDAVTLLARAGLPLTLPEKSRALRHEFPGVTVLELRNQDVPVYVDLGVADAGIVGKDVLIESGRAVYEPVDLRFAACHLSLIREVGASGPIGRVATKYPRSARAYLASRGIPAEVVKLSGNIELAALTGLADAVVDLVQTGSTLRANHLEEIDVLYHSSARLI
type: DOMAIN
name: ATP_PRibTrfase_cat
description: ATP phosphoribosyltransferase, catalytic domain
Protein sequence:
MPDYLGADQRKTKEEEKDDKPIRALDEGDIALLKTYGQSTYSRQIKQVEDDIQQLLKKINELTGIKESDTGLAPPALWDLAADKQTLQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPLPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIKSYAKFSATPRYMTYN

Annotated regions:
phrase: DIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDF
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: PPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LQSEQPLQVARCTKIINADSEDPKYIINVKQFAKFVVDLSDQVAPTDIEEGMRVGVDRNKYQIHIPL
type: DOMAIN
name: PRS7-like_OB
description: 26S proteasome regulatory subunit 7-like, OB domain

phrase: VLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEF
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: IKVLMATNRPDTLDPALM
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site
Protein sequence:
MPLKRSLKESIERLSSFQSKYNIFTSINPSPYSITNKKGTKETLTGCVASIKDNIVTKDFPTTCASHILENFKSPFDATVVKLLKQAGVHILGKTNLDEFGMGSGGVHSIRGPVINPLYPHEDKKIMGGSSSGAAASVACDLVDFALGTDTGGSVRLPACYGSVLGFKPSYGRLSRFGVIAYSQSLDTVGILSKKINVLRKVFHTLDKYDMKDPTSLSVELRELIEGNKKVRRPLKVGIVKEFSHESMPIGFHRLYLSLLEKLINLGLEIYPVSIPSVKNCLPIYYTLSPAEAASNLSRYDGIRYGYRDSELDIKDGILFAPTRSKFGTEVKNRIILGNYNLCSDAFKNNFIKAEKLRVNLIDEFDGIFRFPNVLTNSKGNPDGLDLLIVPTSSKLPGSIRDFEEEEAKSPANSYINDVFTVPMSLAGLPSLSMPLKEKTPIGLQVVGQYGDDSTVLDFVESIS

Annotated regions:
phrase: LKESIERLSSFQSKYNIFTSINPSPYSITNKKGTKETLTGCVASIKDNIVTKDFPTTCASHILENFKSPFDATVVKLLKQAGVHILGKTNLDEFGMGSGGVHSIRGPVINPLYPHEDKKIMGGSSSGAAASVACDLVDFALGTDTGGSVRLPACYGSVLGFKPSYGRLSRFGVIAYSQSLDTVGILSKKINVLRKVFHTLDKYDMKDPTSLSVELRELIEGNKKVRRPLKVGIVKEFSHESMPIGFHRLYLSLLEKLINLGLEIYPVSIPSVKNCLPIYYTLSPAEAASNLSRYDGIRYGYRDSELDIKDGILFAPTRSKFGTEVKNRIILGNYNLCSDAFKNNFIKAEKLRVNLIDEFDGIFRFPNVLTNSKGNPDGLDLLIVPTSSKLPGSIRDFEEEEAKSPANSYINDVFTVPMSLAGLPSLSMPLKEKTPIGLQVVGQYGDDSTV
type: DOMAIN
name: Amidase_dom
description: Amidase signature domain

phrase: GGSSSGAAASVACDLVDFALGTDTGGSVRLP
type: CONSERVED_SITE
name: Amidase_CS
description: Amidase, conserved site
Protein sequence:
MGYLSSVIPTDGSPVSGGGLSQNGKFSYGYASSPGKRASMEDFYETRIDSVDGQIIGLFGVFDGHGGAKVAEYVKQNLFSHLLRHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQCGSTASTAVLVGDRLFVANVGDSRAIICRGGNAIAVSKDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVVDPEIREEVIDHSLEFLILASDGLWDVVTNEEAVDMTRSIHDPEEAAKKLLQEAYKRESSDNITCVVVRFLHGQGSSGYA

Annotated regions:
phrase: FSYGYASSPGKRASMEDFYETRIDSVDGQIIGLFGVFDGHGGAKVAEYVKQNLFSHLLRHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQCGSTASTAVLVGDRLFVANVGDSRAIICRGGNAIAVSKDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVVDPEIREEVIDHSLEFLILASDGLWDVVTNEEAVDMTRSIHDPEEAAKKLLQEAYKRESSDNITCVVVR
type: DOMAIN
name: PPM-type_phosphatase-like_dom
description: PPM-type phosphatase-like domain

phrase: SYGYASSPGKRASMEDFYETRIDSVDGQIIGLFGVFDGHGGAKVAEYVKQNLFSHLLRHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQCGSTASTAVLVGDRLFVANVGDSRAIICRGGNAIAVSKDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVVDPEIREEVIDHSLEFLILASDGLWDVVTNEEAVDMTRSIHDPEEAAKKLLQEAYKRESSDNITCVVVR
type: DOMAIN
name: PPM-type_phosphatase-like_dom
description: PPM-type phosphatase-like domain

phrase: QIIGLFGVFDGHGGAKVAEYVKQNLFSHLLRHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQCGSTASTAVLVGDRLFVANVGDSRAIICRGGNAIAVSKDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVVDPEIREEVIDHSLEFLILASDGLWDVVTNEEAVDMTRSIHDPEEAAKKLLQEAYKRESSDN
type: DOMAIN
name: PPM-type_phosphatase-like_dom
description: PPM-type phosphatase-like domain

phrase: GGGLSQNGKFSYGYASSPGKRASMEDFYETRIDSVDGQIIGLFGVFDGHGGAKVAEYVKQNLFSHLLRHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQCGSTASTAVLVGDRLFVANVGDSRAIICRGGNAIAVSKDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVVDPEIREEVIDHSLEFLILASDGLWDVVTNEEAVDMTRSIHDPEEAAKKLLQEAYKRESSDNITCVV
type: DOMAIN
name: PPM-type_phosphatase-like_dom
description: PPM-type phosphatase-like domain

phrase: LFGVFDGH
type: BINDING_SITE
name: PP2C_BS
description: PPM-type phosphatase, divalent cation binding
Protein sequence:
MSRAATTRMGLLEVRARRAVAGKGARLLRAKREVLASELWKLVHDVLEGRARLDEALHRAVKALELAKALEGEERLASLALPAARAVPLAVTVRRVWGVPTPSVAAPPLVRAADQRGSSPVSWGPSGAAAARHHEESLEVLLTIASKELHLARLGEEIQETSRRINALEQLVLPALRSEASRIAAALDERDREDAVRLRRFRARHPRPA

Annotated regions:
Protein sequence:
MKKVEAIIRPFKLDEVKIALVNAGIVGMTVSEVRGFGRQKGQTERYRGSEYTVEFLQKLKIEIVVDEGQVDMVVDKLVSAARTGEIGDGKIFISPVDSVVRIRTGEKDTEAI

Annotated regions:
phrase: YRGSE
type: PTM
name: N-reg_PII_urydylation_site
description: Nitrogen regulatory protein P-II, urydylation site

phrase: TGEIGDGKIFISP
type: CONSERVED_SITE
name: N-reg_PII_CS
description: Nitrogen regulatory protein PII, conserved site
Protein sequence:
MVLDSGAQAYDQAPPSPPTSPPSLRHRLKPSDRDGPPLYPWSQSLALPLALAVPPALQPQPEQQPFSQMLLGHRGHMRRSESTYSVNSTGRRGRGTLGRPPPGRGRNPGGGTLRPAASLPHIAKTQRDAGHIASKSPCMLVALRPTNMDRERDKFFQSHYTYNPQFEYQEPMPTAVLEKYCEASGQFIHQAVGIIEAVLEKFGTYEHFEAATGGQLLTKCQIWSIVRKYMQKEGCAGEVVVQLSEDLLSQAVMMVENSRPTLAINLTGARQYWLEGMLRHEIGTHYLRGVNNARQPWHNAEGRLRYGLRPANPTEEGLASLHSVLFRKQPFLWRAALLYYTIHRAARMSFRQLFQDLERYVQDADVRWEYCVRAKRGQTDTSLPGCFSKDQVYLDGIVRILRHRQTIDFPLLTSLGKVSYEDVDHLRPHGVLDNTRVPHFMQDLARYRQQLEHIMATNRLDEAELGRLLPD

Annotated regions: