Protein sequence:
MGARSSVLRGKKVDELEKIRLRPGGKKKYRLKHIVWAANELGKFGLAESLLESKEGCQKIITVLDPLVPTGSENLKSLFNTVCVIWCLHAEEKVKDTEGAKQIVQRHLVAETGTADKMPSTSRPAAPPSGRGGNYPVQQIAGNYSHVPLSPRTLNAWVKLVEEKKFGAEVVPGFQALSEGCTPYDINQMLNCVGDHQAAMQIIREIINEEAADWDVQHPIPGPLPAGQLREPRGSDIAGTTSTVEEQIQWMFRAQNPIPVGNIYRRWIQIGLQKCVRMYNPTNILDVKQGPKEPFQSYVDRFYKSLRAEQTDPAVKNWMTQTLLVQNANPDCKLVLKGLGMNPTLEEMLTACQGIGGPGQKARLMAEALKEALAPAPIPFAAAQQRRTIKCWNCGKDGHSARQCRAPRRQGCWKCGKSGHVMANCPERQAGFLRDWPMGKEASQLPRDPSPAGADTNSTPSRPSSRPAREVLAAREEAERAENETIQGGDRGLTAPRTRRDTTQRGDRGFAAPQFSLWKRPVVTAYVEGQPVEVLLDTGADDSIVAGIELGSNYSPKIVGGIGGFINTKEYKNVEIKVLNKKVKATIMTGDTPINIFGRNILTALGMSLNLPVAKVDPIKVILKPGKDGPKVRQWPLTKEKIEALKEICEKMEREGQLEEAPPTNPYNTPTFAIKKKDKNKWRMLIDFRELNKVTQEFTEIQLGIPHPAGLAKKRRITVLDIGDAYFSIPLHEDFRQYTAFTLPTVNNAEPGKRYIYKVLPQGWKGSPAIFQHTMRQVLEPFRKANPDVILVQYMDDILIASDRTDLEHDRTVLQLKELLNGLGFSTPDEKFQKDPPYKWMGYELWPTKWKLQKIQLPQKEVWTVNDIQKLVGVLNWAAQIYPGIKTKHLCRLIRGKMTLTEEVQWTELAEAELEENKIILSQEQEGCYYQEEKELEATVQKDQDNQWTYKIHQGEKILKVGKYAKIKNTHTNGVRLLAHVVQKIGKEALVIWGRIPKFHLPVERETWEQWWDNYWQVTWIPDWDFVSTPPLVRLAFNLVKDPIPGEETFYTDGSCNRQSKEGKAGYITDRGRDKVRILEQTTNQQAELEAFAMALTDSGPKANIIVDSQYVMGIVAGQPTESESKLVNQIIEEMIKKETLYVAWVPAHKGIGGNQEVDHLVSQGIRQVLFLEKIEPAQEEHEKYHSNVKELSHKFGLPKLVARQIVNTCAQCQQKGEAIHGQVDAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQETGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWTGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTMETIVLMAVHCMNFKRRGGIGDMTPAERLINMITTEQEIQFLHAKNSKLKNFRVYFREGRDQLWKGPGELLWKGDGAVIVKVGTDIKIVPRRKAKIIRDYGGRREVDSSSHLEGTREDGEVA

Annotated regions:
phrase: YYQEEKELEATVQKDQDNQWTYKIHQGEKILKVGKYAKIKNTHTNGVRLLAHVVQKIGKEALVIWGRIPKFHLPVERETWEQWWDNYWQVTWIPDWDFVS
type: DOMAIN
name: RVT_connect
description: Reverse transcriptase connection

phrase: LQKIQLPQKEVWTVNDIQKLVGVLNWAAQIYPGIKTKHLCRLIRGKMTLTEEVQWTELAEAEL
type: DOMAIN
name: RVT_thumb
description: Reverse transcriptase thumb

phrase: EKIEPAQEEHEKYHSNVKELSHKFGLPKLVARQIVNTCAQC
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: VLLDTGADDSI
type: ACTIVE_SITE
name: Aspartic_peptidase_AS
description: Aspartic peptidase, active site

phrase: VEVLLDTGADDSIVAGIELGSNYSPKIVGGIGGFINTKEYKNVEIKVLNKKVKATIMTGDTPINIFGRN
type: DOMAIN
name: Peptidase_A2_cat
description: Peptidase A2A, retrovirus, catalytic

phrase: GCWKCGKSGHVMANCP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: IKCWNCGKDGHSARQC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: IKKKDKNKWRMLIDFRELNKVTQEFTEIQLGIPHPAGLAKKRRITVLDIGDAYFSIPLHEDFRQYTAFTLPTVNNAEPGKRYIYKVLPQGWKGSPAIFQHTMRQVLEPFRKANPDVILVQYMDDILIASDRTDLEHDRTVLQLKELLNGLGFSTPDEKFQKDPPYKWMGYE
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: FRVYFREGRDQLWKGPGELLWKGDGAVIVKVGTDIKIVPRRKAKIIR
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: VYFREGRDQLWKGPGELLWKGDGAVIVKVGTDIKIVPRRKAKI
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: AQEEHEKYHSNVKELSHKFGLPKLVARQIVNTCAQCQ
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: VTAYVEGQPVEVLLDTGADDSIVAGIELGSNYSPKIVGGIGGFINTKEYKNVEIKVLNKKVKATIMTGDTPINIFGRNIL
type: DOMAIN
name: Retropepsin-like_cat_dom
description: Retropepsin-like catalytic domain

phrase: KCWNCGKDGHSARQC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: GCWKCGKSGHVMANCP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: KCWNCGKDGHSARQCR
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: MYNPTNILDVKQGPKEPFQSYVDRFYKSLRAEQTDPAVKNWMTQTLLVQNANPDCKLVLKGLGMNPTLEEMLT
type: DOMAIN
name: Gag_p24_C
description: Retroviral nucleocapsid Gag protein p24, C-terminal domain

phrase: IPGEETFYTDGSCNRQSKEGKAGYITDRGRDKVRILEQTTNQQAELEAFAMALTDSGPKANIIVDSQYVMGIVAGQPTESESKLVNQIIEEMIKKETLYVAWVPAHKGIGGNQEVDHLVSQGI
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: RSSVLRGKKVDELEKI
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: RPGGKKKYRLKHIVWAAN
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: GKFGLAESLLESKEG
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: TGSENLKSLFNTVCVIWCL
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: HAEEKVKDTEGAK
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: GARSSVLRGKKVDELEKIRLRPGGKKKYRLKHIVWAANELGKFGLAESLLESKEGCQKIITVLDPLVPTGSENLKSLFNTVCVIWCLHAEEKVKDTEGAKQIVQRHLVAETGTADKMPSTSRPAAPPSGRGGNYPVQQIAGN
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: CWKCGKSGHVMANCP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: QVDAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQETGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWTGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTMETIVLMAVHCMNFKRRGGIGDMTPAERLINM
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: EGQLEEAPPTNPYNTPTFAIKKKDKNKWRMLIDFRELNKVTQEFTEIQLGIPHPAGLAKKRRITVLDIGDAYFSIPLHEDFRQYTAFTLPTVNNAEPGKRYIYKVLPQGWKGSPAIFQHTMRQVLEPFRKANPDVILVQYMDDILIASDRTDLEHDRTVLQLKELLNGLGFSTPDEKFQKDPPYKWMGYE
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: WKRPVVTAYVEGQPVEVLLDTGADDSIVAGIELGSNYSPKIVGGIGGFINTKEYKNVEIKVLNKKVKATIMTGDTPINIFGRNILTALGMS
type: DOMAIN
name: Retropepsins
description: Retropepsins

phrase: LGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQETGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWTGIEQSFGVPYN
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: ETFYTDGSCNRQSKEGKAGYITDRGRDKVRILEQTTNQQAELEAFAMALTDSGPKANIIVDSQYVMGIVAGQPTESESKLVNQIIEEMIKKETLYVAWVPAHKGIGGNQEVDHLVSQG
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain