Protein sequence:
MSKKPGGPAGRRVVNMLKRPASVSPIKGIKRLIGNLTDGRGPLRVVLAFIAFFRFAAIMPTQGLLRRWRVMNKSEALKHLTSFKKEISNMLNIINRRKAKRGNGSVLLWIALVTGSMALRLGTYQGKVLMSINKTDVAEIIPIPTTKGDNLCTVRAMDVGYMCQNDITYECPRLEPGMDPEDIDCWCDREAIYVHYGLCTKNHRERRGRRSVNIPSHGESQLENRGTPWLDTAKTTKYLTKVENWMIRNPGYAIVAVAAAWMLGSNTSQKVIFTIMLLLIAPAYSINCLGVTNRDFVEGMSGGTWVDIVLEGDGCVTIMAKDKPTLDIRLLKMEAKDLATVRSYCYHATVTSVSSEARCPTMGEAHNPKALDSNYLCKSTYVDRGWGNGCGLFGKGSLQTCVKFGCTQKAMGMTIQRENLDYELAIYVHGPTSVAAHGNYTTQLGAKHAAKFSITPSSPSFTANLGEYGEATVDCEPRAALDIDNYYVMSMNNKHWLVNRDWFHDLDLPWTGPATDVWKYRESLVEFEEAHVTRQTVVALAAQEGELHIVLAGAIPVTVAGTTLTLTSGHLKCRMKLDKLKIKGSTYLMCKDKFAFAKNPVDTGHGTIVTEVQYAGSDGPCRIPITMTENLHDLTPIGRLVTVNPFVPSSETAQKILIELEPPFGTSFILVGTGPNQVKYQWHKSGSVIGSAFKTTIKGAQRMAVLGETAWDFGSVGGVFNSIGKGIHGLFGGAFRTLFGGMSWVTQALMGALLLWLGVSSRERTVSITLLATGGILLFLAMNVHADTGCAIDITRRELKCGSGIFIHNDVETWRDNYKYHPSTPKNFAKIIHKAYKEGICGVRSASRLEHEMWKHIAPELNAILEDNEVDLSVVVEEHKGIYKKAPLRLENTSDEMHFGWKNWGKSFLFKTQMANSTFVVDGPETKECPTERRAWNSLEIEDFGVGIMSTKVFLKVNGDKTEVCDSMVMGTAIKGNRAVHSDLGYWIESGKNTSWRLERAVLGEVRSCTWPESHTLWNEGVEDSDLIIPPTLGGPRTHHNKREGYKTQLKGPWNEEGPIIIEFGECPGTKVTQEESCRNRAASARTTTASGKVIRDWCCKNCTMPPLRFTTKNGCWYGMEIRPKHESEETLIKSKVTAGTGNDICRFQLGLLMAFVFTQEVLRKRWTARLALPTAALLLACFVLGAFTYSDMIRYFVLVGCAFAESNSGGDVIHLALIAVFNIQPAALVSTFFRNRWTNRENLLLVIAAAMAQMAWSDVGIEIMPIMNAMALAWMILKAVSIGTVSTIAMPILSGLAPPMEWFGLDVLRCLLLIVGVAALIKERKENLAKKKGALLISAGLALTGAFSPLVLQGALMLSECATKRGWPASEVLTAIGMTIALAGSVARLDSGTMAIPLATTSILFVSYVLSGKSTDMWIERCADVTWEEEAEITGTSPRLDVELDDNGDFKMINDPGVPMWMWASRMGLMCMAAYNPVLIPVSVAGYWMTRKIHKRGGVLWDLPAPKQMGRSDMKPGVYRVMTSGVLGSYQSGVGVMYDGVFHTMWHVTQGAALRNGEGRLNPTWGSVRDDLITYGGKWKLSATWDGTEEVQLIAAEPGKPVKNFQTRPGVFKTPAGEVGAITLDFPKGTSGSPIVNKAGAVIGLYGNGLVLSHGAYVSAISQGERQEEEAPEAFTPEMLRKRQLTILDLHPGAGKTRRVIPQIVREAVKQRLRTVILAPSRVVAAEIAEALRGLPVRFQTSAVKAEHSGTEIVDVMCHATLTQRLMTPMRVPNYNVFVMDEAHFTDPASIAARGYISTKVESGEAAAIFMTATPPGTIDPFPDSNSPIIDQEAEIPDRAWNSGFEWITDYTGKTVWFVPSVRSGNEIAMCLTKAGKKVIQLNRKSYETEYQKCKGNDWDYVVTTDISEMGANFGAHRVIDSRKCVKPVIINDGEGRVQLNGPLPITASSAAQRRGRVGRDPTQSGDEYYYGGPITNDDTGHAHWIEAKMLLDNIQLQNGLVAQLYKPERDKVFATDGEYRLRGEQKKHFVELMRTGELPVWLSYKVAEAGINYTDRRWCFDGPHNNTILEDNTEVEIWTRQGERKVLRPRWSDARVYSDNQALRAFKEFAAGKRSAGSMMDVMARMPDYFWTKTMNAADNLYVLATTEKGGRAHRAALEELPDTLETVLLIAMMSLASCGMLALMMQRKGIGKTGMGTAVLTAVTILLWMADVPAPKIAGVLLISFLLMIVLIPEPEKQRSQTDNHLAVFLICALLLVSAVSANEMGWLDTTKRDLGKLFSGPSAVTTSRWEPLKLALALKPATAWAGYAGMTMLLTPLFRHLITTQYISFSLTAITSQASALFGLNSGYPFVGVDLSVVFLLVGCYGQYNLPTTMATIGLLVGHYAFMIPGWQAEAMRAAQRRTAAGVMKNAVVDGIVATDIPEMDTATPIVEKKMGQVMLLIISALAILLNPDTMTVVEGGVLITAALATLLEGNANTVWNSTVAVGVCHLMRGGWAAGPSIGWTIIRNLEAPKVKRGGIAAPTLGEIWKSRLNQLTREQFMEYRKDGIIEVDRTAARRARREGNRTGGHPVSRGTAKLRWLVERGFAKPLGKVVDLGCGRGGWSYYCATLRHVQEVRGYTKGGPGHEEPMLMQSYGWNIVSMKSGIDVFYRPTEACDTVLCDIGESSPSPGVEEARTLRVLEMIEPWLRTANQYCVKVLCPYTPKVIERLEKLQRKYGGGLVRVPLSRNSNHEMYWVSEASSNLINAVNATSQVLLQRLEKDHRKGPRYEEDVDLGSGTRSVARRSPFMDTRKIHHRIERLKSEFSTTWHYDCEHPYRTWNYHGSYEVKPTGSASSMVNGVVKLMSKPWDSIQSVLTMAMTDTTPFGQQRVFKEKVDTKAPEPAPGVKAVLDLTTDWLWAVLCRRKKPRMCTKEEFIAKVNSHAALGAIFEEQNQWASAREAVEDPGFWNFVDKERQAHLEGRCETCIYNMMGKREKKLGEFGKAKGSRAIWYMWLGARFLEFEALGFLNEDHWMSRENSYGGVEGKGLQKLGYILQEISRKEGGHMFADDTAGWDTRVTLTDLENEAKITRWMEPEHRKLAEAMIELTYKNKVVKVTRPGKEGKTVMDIISRNDQRGSGQVVTYALNTYTNLAVQLIRCMEGEGLLEEEETMRISDAKRRAVQAWLDTNGTERLTPMAVSGDDCVVKPIDNRFATALHFLNGMSKVRKDIQEWKPSTGWTNWQEVPFCSHHFNELVMRDGRKIVVPCRAQDELIGRARVSPGSGWSLRETACLGKAYAQMWLLMYFHRRDLRLMANAICSAVPIDWVPTGRTTWSIHGKGEWMTTEDMLAVWNRVWIFENEHMEDKTPVYSWTDVPYIGKREDQWCGSLIGHRSRATWAENIYTPIMQVRNLIGAERYVDYMPAQTRFAHEAELQGGVL

Annotated regions:
phrase: SVIGSAFKTTIKGAQRMAVLGETAWDFGSVGGVFNSIGKGIHGLFGGAFRTLFGGMSWVTQALMGALLLWLGVSSRERTVSITLLATGGILLFL
type: DOMAIN
name: Flavi_E_Stem/Anchor_dom
description: Flavivirus envelope glycoprotein E, Stem/Anchor domain

phrase: GLLMAFVFTQEVLRKRWTARLALPTAALLLACFVLGAFTYSDMIRYFVLVGCAFAESNSGGDVIHLALIAVFNIQPAALVSTFFRNRWTNRENLLLVIAAAMAQMAWSDVGIEIMPIMNAMALAWMIL
type: DOMAIN
name: Flavi_NS2A
description: Flavivirus non-structural protein NS2A

phrase: MKPGVYRVMTSGVLGSYQSGVGVMYDGVFHTMWHVTQGAALRNGEGRLNPTWGSVRDDLITYGGKWKLSATWDGTEEVQLIAAEPGKPVKNFQTRPGVFKTPAGEVGAITLDFPKGTSGSPIVNKAGAVIGLYGNGLVLSHGAYVSAIS
type: DOMAIN
name: Flavi_NS3_S7
description: Non-structural protein NS3, peptidase S7, flavivirus

phrase: GPAGRRVVNMLKRPASVSPIKGIKRLIGNLTDGRGPLRVVLAFIAFFRFAAIMPTQGLLRRWRVMNKSEALKHLTSFKKEISNMLNIINRRKAKRGNGSVLLWIALVTGSM
type: DOMAIN
name: Flavi_capsidC
description: Capsid protein C, flavivirus

phrase: GCAIDITRRELKCGSGIFIHNDVETWRDNYKYHPSTPKNFAKIIHKAYKEGICGVRSASRLEHEMWKHIAPELNAILEDNEVDLSVVVEEHKGIYKKAPLRLENTSDEMHFGWKNWGKSFLFKTQMANSTFVVDGPETKECPTERRAWNSLEIEDFGVGIMSTKVFLKVNGDKTEVCDSMVMGTAIKGNRAVHSDLGYWIESGKNTSWRLERAVLGEVRSCTWPESHTLWNEGVEDSDLIIPPTLGGPRTHHNKREGYKTQLKGPWNEEGPIIIEFGECPGTKVTQEESCRNRAASARTTTASGKVIRDWCCKNCTMPPLRFTTKNGCWYGMEIRPKHESEETLIKSKVTAG
type: DOMAIN
name: Flavi_NS1
description: Non-structural protein NS1, flavivirus

phrase: KFAFAKNPVDTGHGTIVTEVQYAGSDGPCRIPITMTENLHDLTPIGRLVTVNPFVPSSETAQKILIELEPPFGTSFILVGTGPNQVKYQWHK
type: DOMAIN
name: Flavi_E_Ig-like
description: Glycoprotein E, immunoglobulin-like domain, flavivirus

phrase: CLGVTNRDFVEGMSGGTWVDIVLEGDGCVTIMAKDKPTLDIRLLKMEAKDLATVRSYCYHATVTSVSSEARCPTMGEAHNPKALDSNYLCKSTYVDRGWGNGCGLFGKGSLQTCVKFGCTQKAMGMTIQRENLDYELAIYVHGPTSVAAHGNYTTQLGAKHAAKFSITPSSPSFTANLGEYGEATVDCEPRAALDIDNYYVMSMNNKHWLVNRDWFHDLDLPWTGPATDVWKYRESLVEFEEAHVTRQTVVALAAQEGELHIVLAGAIPVTVAGTTLTLTSGHLKCRMKLDKLKIK
type: DOMAIN
name: Flavi_Glycoprot_E_cen/dimer
description: Envelope glycoprotein E, central and dimerisation domain, flavivirus

phrase: VMARMPDYFWTKTMNAADNLYVLATTEKGGRAHRAALEELPDTLETVLLIAMMSLASCGMLALMMQRKGIGKTGMGTAVLTAVTILLWMADVPAPKIAGVLLISFLLMIVLIPEPEKQRSQTDNHLAVFLICALLLVSA
type: DOMAIN
name: Flavi_NS4A
description: Flavivirus non-structural protein NS4A

phrase: GGIAAPTLGEIWKSRLNQLTREQFMEYRKDGIIEVDRTAARRARREGNRTGGHPVSRGTAKLRWLVERGFAKPLGKVVDLGCGRGGWSYYCATLRHVQEVRGYTKGGPGHEEPMLMQSYGWNIVSMKSGIDVFYRPTEACDTVLCDIGESSPSPGVEEARTLRVLEMIEPWLRTANQYCVKVLCPYTPKVIERLEKLQRKYGGGLVRVPLSRNSNHEMYWVSEASSNLINAVNATSQVLLQRLEKDHRKGPRYEEDVDLGSGTR
type: DOMAIN
name: mRNA_cap_0/1_MeTrfase
description: mRNA cap 0/1 methyltransferase

phrase: GERQEEEAPEAFTPEMLRKRQLTILDLHPGAGKTRRVIPQIVREAVKQRLRTVILAPSRVVAAEIAEALRGLPVRFQTSAVKAEHSGTEIVDVMCHATLTQRLMTPMRVPNYNVFVMDEAHFTDPASIAARGYISTKVESGEAAAIFMTATPPGTIDPFPDSNSPIIDQEAEIPDRAWNSGFEWITD
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: YYGGPITNDDTGHAHWIEAKMLLDNIQLQNGLVAQLYKPERDKVFATDGEYRLRGEQKKHFVELMRTGELPVWLSYKVAEAGINYTDRRWCFDGPHNNTILEDNTEVEIWTRQGERKVLRPRWSDARVYSDNQALRAFKEFAA
type: DOMAIN
name: NS3-hel_C_flaviviridae
description: Flavivridae NS3 helicase, C-terminal helical domain

phrase: YLMCKDKFAFAKNPVDTGHGTIVTEVQYAGSDGPCRIPITMTENLHDLTPIGRLVTVNPFVPSSETAQKILIELEPPFGTSFILVGTGPNQVKYQWH
type: DOMAIN
name: Flavi_E_Ig-like
description: Glycoprotein E, immunoglobulin-like domain, flavivirus

phrase: LMSINKTDVAEIIPIPTTKGDNLCTVRAMDVGYMCQNDITYECPRLEPGMDPEDIDCWCDREAIYVHYGLCTKNHRERRG
type: DOMAIN
name: Flavi_propep
description: Flavivirus polyprotein propeptide

phrase: VSRGTAKLRWLVERGFAKPLGKVVDLGCGRGGWSYYCATLRHVQEVRGYTKGGPGHEEPMLMQSYGWNIVSMKSGIDVFYRPTEACDTVLCDIGESSPSPGVEEARTLRVLEMIEPWLRTANQYCVKVLCPYTPKVIERLEKLQRKYGGGLVRVPLSRNSNHEMYWV
type: DOMAIN
name: RNA_MeTrfase_FtsJ_dom
description: Ribosomal RNA methyltransferase, FtsJ domain

phrase: NEMGWLDTTKRDLGKLFSGPSAVTTSRWEPLKLALALKPATAWAGYAGMTMLLTPLFRHLITTQYISFSLTAITSQASALFGLNSGYPFVGVDLSVVFLLVGCYGQYNLPTTMATIGLLVGHYAFMIPGWQAEAMRAAQRRTAAGVMKNAVVDGIVATDIPEMDTATPIVEKKMGQVMLLIISALAILLNPDTMTVVEGGVLITAALATLLEGNANTVWNSTVAVGVCHLMRGGWAAGPSIGW
type: DOMAIN
name: Flavi_NS4B
description: Flavivirus non-structural protein NS4B

phrase: GWPASEVLTAIGMTIALAGSVARLDSGTMAIPLATTSILFVSYVLSGKSTDMWIERCADVTWEEEAEITGTSPRLDVELDDNGDFKMINDPGVPMWMWASRMGLMCMAAYNPVLIPVSVAGYWMTRKIHK
type: DOMAIN
name: Flavi_NS2B
description: Non-structural protein NS2B, flavivirus

phrase: YEEDVDLGSGTRSVARRSPFMDTRKIHHRIERLKSEFSTTWHYDCEHPYRTWNYHGSYEVKPTGSASSMVNGVVKLMSKPWDSIQSVLTMAMTDTTPFGQQRVFKEKVDTKAPEPAPGVKAVLDLTTDWLWAVLCRRKKPRMCTKEEFIAKVNSHAALGAIFEEQNQWASAREAVEDPGFWNFVDKERQAHLEGRCETCIYNMMGKREKKLGEFGKAKGSRAIWYMWLGARFLEFEALGFLNEDHWMSRENSYGGVEGKGLQKLGYILQEISRKEGGHMFADDTAGWDTRVTLTDLENEAKITRWMEPEHRKLAEAMIELTYKNKVVKVTRPGKEGKTVMDIISRNDQRGSGQVVTYALNTYTNLAVQLIRCMEGEGLLEEEETMRISDAKRRAVQAWLDTNGTERLTPMAVSGDDCVVKPIDNRFATALHFLNGMSKVRKDIQEWKPSTG
type: DOMAIN
name: Flavi_RdRp_fingers/palm
description: RNA-directed RNA polymerase, fingers/palm subdomains, flavivirus

phrase: GFEWITDYTGKTVWFVPSVRSGNEIAMCLTKAGKKVIQLNRKSYETEYQKCKGNDWDYVVTTDISEMGANFGAHRVIDSRKCVKPVIINDGEGRVQLNGPLPITASSAAQRRGRVGRDPTQSGDEYYYGGPITNDDTGHAHWIEAKMLLDNIQLQNGLVAQLYKP
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: GHMFADDTAGWDTRVTLTDLENEAKITRWMEPEHRKLAEAMIELTYKNKVVKVTRPGKEGKTVMDIISRNDQRGSGQVVTYALNTYTNLAVQLIRCMEGEGLLEEEETMRISDAKRRAVQAWLDTNGTERLTPMAVSGDDCVVKPIDNRFAT
type: DOMAIN
name: RNA-dir_pol_PSvirus
description: RNA-directed RNA polymerase, catalytic domain

phrase: PEMLRKRQLTILDLHPGAGKTRRVIPQIVREAVKQRLRTVILAPSRVVAAEIAEALRGLPVRFQTSAVKAEHSGTEIVDVMCHATLTQRLMTPMRVPNYNVFVMDEAHFTDPASIAARGYISTKVESGEAAAIFMTATPPGTIDPFPDSNSPIIDQ
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: VNIPSHGESQLENRGTPWLDTAKTTKYLTKVENWMIRNPGYAIVAVAAAWMLGSNTSQKVIFTIMLLLIAPAY
type: DOMAIN
name: Env_glycoprot_M_flavivir
description: Envelope glycoprotein M, flavivirus

phrase: QEVPFCSHHFNELVMRDGRKIVVPCRAQDELIGRARVSPGSGWSLRETACLGKAYAQMWLLMYFHRRDLRLMANAICSAVPIDWVPTGRTTWSIHGKGEWMTTEDMLAVWNRVWIFENEHMEDKTPVYSWTDVPYIGKREDQWCGSLIGHRSRATWAENI
type: DOMAIN
name: Flavi_NS5_thumb
description: RNA-directed RNA polymerase, thumb subdomain, flavivirus

phrase: MVNGVVKLMSKPWDSIQSVLTMAMTDTTPFGQQRVFKEKVDTKAPEPAPGVKAVLDLTTDWLWAVLCRRKKPRMCTKEEFIAKVNSHAALGAIFEEQNQWASAREAVEDPGFWNFVDKERQAHLEGRCETCIYNMMGKREKKLGEFGKAKGSRAIWYMWLGARFLEFEALGFLNEDHWMSRENSYGGVEGKGLQKLGYILQEISRKEGGHMFADDTAGWDTRVTLTDLENEAKITRWMEPEHRKLAEAMIELTYKNKVVKVTRPGKEGKTVMDIISRNDQRGSGQVVTYALNTYTNLAVQLIRCMEGEGLLEEEETMRISDAKRRAVQAWLDTNGTERLTPMAVSGDDCVVKPIDNRFATALHFLNGMSKVRKDIQEWKPSTGWTNWQEVPFCSHHFNELVMRDGRKIVVPCRAQDELIGRARVSPGSGWSLRETACLGKAYAQMWLLMYFHRRDLRLMANAICSAVPIDWVPTGRTTWSIHGKGEWMTTEDMLAVWNRVWIFENEHMEDKTPVYSWTDVPYIGKREDQWCGSLIGHRSRATWAENIYTPIMQVRNLIGAERYVDY
type: DOMAIN
name: Flavi_RdRp
description: RNA-dependent RNA polymerase, flavivirus

phrase: RKRQLTILDLHPGAGKTRRVIPQIVREAVKQRLRTVILAPSRVVAAEIAEALRGLPVRFQTSAVKAEHSGTEIVDVMCHATLTQRLMTPMRVPNYNVFVMDEAHFTDPASIAARGYISTKVESGEAAAIFMTATPPGTIDPFPDSN
type: DOMAIN
name: Flavi_DEAD
description: Non-structural protein NS3-like, DEAD box helicase, flavivirus

phrase: GSAFKTTIKGAQRMAVLGETAWDFGSVGGVFNSIGKGIHGLFGGAFRTLFGGMSWVTQALMGALLLWLGVSSRERTVSITLLATGGILLFLAMNVH
type: DOMAIN
name: Flavi_E_Stem/Anchor_dom
description: Flavivirus envelope glycoprotein E, Stem/Anchor domain

phrase: TLGEIWKSRLNQLTREQFMEYRKDGIIEVDRTAARRARREGNRTGGHPVSRGTAKLRWLVERGFAKPLGKVVDLGCGRGGWSYYCATLRHVQEVRGYTKGGPGHEEPMLMQSYGWNIVSMKSGIDVFYRPTEACDTVLCDIGESSPSPGVEEARTLRVLEMIEPWLRTANQYCVKVLCPYTPKVIERLEKLQRKYGGGLVRVPLSRNSNHEMYWVSEASSNLINAVNATSQVLLQ
type: DOMAIN
name: mRNA_cap_0/1_MeTrfase
description: mRNA cap 0/1 methyltransferase

phrase: NEIAMCLTKAGKKVIQLNRKSYETEYQKCKGNDWDYVVTTDISEMGANFGAHRVIDSRKCVKPVIINDGEGRVQLNGPLPITASSAAQRRGRVGRD
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: GGVLWDLPAPKQMGRSDMKPGVYRVMTSGVLGSYQSGVGVMYDGVFHTMWHVTQGAALRNGEGRLNPTWGSVRDDLITYGGKWKLSATWDGTEEVQLIAAEPGKPVKNFQTRPGVFKTPAGEVGAITLDFPKGTSGSPIVNKAGAVIGLYGNGLVLSHGAYVSAISQGERQEEEAPE
type: DOMAIN
name: Flavi_NS3_S7
description: Non-structural protein NS3, peptidase S7, flavivirus

phrase: EVLTAIGMTIALAGSVARLDSGTMAIPLATTSILFVSYVLSGKSTDMWIERCADVTWEEEAEITGTSPRLDVELDDNGDFKMINDPGVPMWMWASRMGLMCMAAYNPVLIPVSVAGYWMTRKIHK
type: DOMAIN
name: Flavi_NS2B
description: Non-structural protein NS2B, flavivirus