nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MPAIRLFDTAAGHEVLLESGDRPSMYVCGITPYDATHMGHAASYVAFDLLNRAWRDAGKDVDYVQNVTDVDDPLLERATATNVDWRDLAQSQIDLFQTDMEALNVLSPDHYVGAVESISLIVPQVERLVSQGLAYTVPGTNGEPDGDVYYDVEAAGKQSVAPDAWSLGSISGLSESEMLELFAERGGDPGRSGKRQALDPLLWRVARDGEPSWPGASLGDGRPGWHIECTVIAQKYLPAPFTVQGGGSDLIFPHHEMGAGHAYSLAGVPLARHYAHAGMVGLDGEKMSKSKGNLVLVSKLRAAGENPAAIRLAILAHHYRSDWSWTDEGFAAAKADLAAWRRALDHAPQGSAAALVEEMRAALAADLDAPAAVAAVSRWARQANDGGAPASAPDQALVRDAVDALLGVRL

Annotated regions:
phrase: SMYVCGITPYDATHMGHAASYVAFDLLNRAWRDAGKDVDYVQNVTDVDDPLLERATATNVDWRDLAQSQIDLFQTDMEALNVLSPDHYVGAVESISLIVPQVERLVSQGLAYTVPGTNGEPDGDVYYDVEAAGKQSVAPDAWSLGSISGLSESEMLELFAERGGDPGRSGKRQALDPLLWRVARDGEPSWPGASLGDGRPGWHIECTVIAQKYLPAPFTVQGGGSDLIFPHHEMGAGHAYSLAGVPLARHYAHAGMVGLDGEKMSKSKGNLVLVSKLRAAGENPAAIRLAILAHHYRSDWSWTDEGFAAA
type: DOMAIN
name: tRNA-synt_1_cat_dom
description: tRNA synthetases class I, catalytic domain
Protein sequence:
MEWSSESAAVRRHRGTAERREGQAAASHPQREASAQEDARGGGRMRGRTESGGESRGAKTALSEARTALALALYLLALRALVQLSLQRLVLSRTSGLQGEFDARQARVYLEHITAIGPRTTGSAENEILTVQYLLEQITLIEEQSNSLHRISVDVQRPTGSFSIDFLGGFTSYYDNITNVVVKLEPQDGAKYAVLANCHFDSVANSPGASDDAVSCAVMLEVLRVMAASPEPLQHAVVFLFNGAEENVLQASHGFITQHPWASLIRAFINLEAAGVGGKELVFQTGPENPWLVQAYVSAAKHPFASVVAQEVFQSGIIPSDTDFRIYRDFGNIPGIDLAFIENGYIYHTKYDTADRILIDSIQRAGDNILAVLKYLATSDMLASSSEYRHGSMVFFDVLGLLVIAYPSRVGSIINYMVVMAVVLYLGRKLLRPNHSNSNYVRDFLCGLGITFISWFTSLVTVLIIAVFVSLIGQSLSWYNYFYIAVCLYGTATVAKIILIHTLAKRFYYVNASDLYLGELFFDTSLFVHCGFLVALTAQGFCSAFMSAVWVAFPLLTKLCVYKDFKKHGAKGRFIALYLLGMFIPYLYGLYLIWAVFEMFTPILGRSGSEIPPDVVLASILAVCVMILSSYFITFIYLVNSTKKTILTLILVCAVTFLLVCSGAFFPYSSNPDSPKPKRVFLQHVSRTFHNLEGSVVKRDSGIWINGFDYTGMSHVTPHIPEINDTIRAHCEENAPLCGFPWYLPVHFLIRKNWYLPAPEISPRNPAHFRLVSKEKMPWDSIKLTFEATGPSHMSFYVRTHKGSTLSQWSLGNGIPVTSRGGDYFVFYSHGLQASAWQFWIEVQVSEEQPEGMVTVAIAAHYLSGENKRSSQLDALKEKFPDWSFPSAWVSTYSLFVF

Annotated regions:
phrase: YVRDFLCGLGITFISWFTSLVTVLIIAVFVSLIGQSLSWYNYFYIAVCLYGTATVAKIILIHTLAKRFYYVNASDLYLGELFFDTSLFVHCGFLVALTAQGFCSAFMSAVWVAFPLLTKLCVYKDFKKHGAKGRFIALYLLGMFIPYLYGLYLIWAVFEMFTPILGRSGSEIPPDVVLASILAVCVMILSSYFITFIYLVNSTKKTILTLILVCAVTFLLV
type: DOMAIN
name: ERMP1_1-A_TM
description: Endoplasmic reticulum metallopeptidase 1/1-A, TM domain

phrase: NVVVKLEPQDGAKYAVLANCHFDSVANSPGASDDAVSCAVMLEVLRVMAASPEPLQHAVVFLFNGAEENVLQASHGFITQHPWASLIRAFINLEAAGVGGKELVFQTGPENPWLVQAYVSAAKHPFASVVAQEVFQSGIIPSDTDFRIYRDFGNIPGIDLAFIENGYIYHTKYDTADRILIDSIQRAGDNILA
type: DOMAIN
name: Peptidase_M28
description: Peptidase M28

phrase: PKPKRVFLQHVSRTFHNLEGSVVKRDSGIWINGFDYTGMSHVTPHIPEINDTIRAHCEENAPLCGFPWYLPVHFLIRKNWYLPAPEISPRNPAHFRLVSKEKMPWDSIKLTFEATGPSHMSFYVRTHKGSTLSQWSLGNGIPVTSRGGDYFVFYSHGLQASAWQFWIEVQVSEEQPEGMVTVAIAAHYLSGENKRSSQLDALKEKFPDWSFPSAWVSTYSL
type: DOMAIN
name: ERMP1-like_C
description: Endoplasmic reticulum metallopeptidase 1-like, C-terminal domain

phrase: GEFDARQARVYLEHITAIGPRTTGSAENEILTVQYLLEQITLIEEQSNSLHRISVDVQRPTGSFSIDFLGGFTSYYDNITNVVVKLEPQDGAKYAVLANCHFDSVANSPGASDDAVSCAVMLEVLRVMAASPEPLQHAVVFLFNGAEENVLQASHGFITQHPWASLIRAFINLEAAGVGGKELVFQTGPENPWLVQAYVSAAKHPFASVVAQEVFQSGIIPSDTDFRIYRDFGNIPGIDLAFIENGYIYHTKYDTADRILIDSIQRAGDNILAVLKYLATSDMLASSSEYRHGSMVFFDVLGLLVIA
type: DOMAIN
name: Fxna-like_M28_dom
description: Endoplasmic reticulum metallopeptidase 1-like, M28 peptidase domain
Protein sequence:
MKNFFKKLRLKRRVVTALAALHFYGNPSTKLKVIGVTGTNGKTTTTTLLYKVATTLGYKAGLIGTVENIIAGEVRDATHTTPDPIYLNKLLSEMAYRGCEYVFMEISSHALDQRRVAGITFAGGVFTNLTHDHLDYHKSLENYFLAKKKFFKMLPTDAFALANADDEHGRLMLEGTRARQFFYGFKDAPDFKGEISSINFYGLELLFNQIYIKSHLLGKFNAYNLLAVWSVCQLLGFNMERVGKILETIEPPRGRFEHFTAPNGVLVVVDYAHSPDALEKIFEAVLEIKQRTGKLISVFGCGGDRDPLKRRVMGKIGAVNSDIAIFTSDNPRSENPEQIIFEMKTDLSMKDTAKVKVISDRHEAIKEAVRIAKGGDIILCAGKGHEDYQEIKGVKRHFSDMEEFKKAYGKL

Annotated regions:
phrase: VTGTNGKTTTTTLLYKVATTLGYKAGLIGTVENIIAGEVRDATHTTPDPIYLNKLLSEMAYRGCEYVFMEISSHALDQRRVAGITFAGGVFTNLTHDHLDYHKSLENYFLAKKKFFKMLPTDAFALANADDEHGRLMLEGTRARQFFYGFKDAPDFKGEISSINFYGLELLFNQIYIKSHLLGKFNAYNLLAVW
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRFEHFTAPNGVLVVVDYAHSPDALEKIFEAVLEIKQRTGKLISVFGCGGDRDPLKRRVMGKIGAVNSDIAIFTSDNPRSENPEQIIFEMKTDLSMKDTAKVKVISDRHEAIKEAVRIAKGGDIILCAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MTMLISLPTAPSVPNYQSLERPLNFTMAAAAKVRELIQEENSADLALRVYIQGGGCSGFQYGFEFDENRADDDLVLETDGVVLLVDPLSLQYLLGAEVDYTESLTGAKFVIRNPNAKTTCGCGSSFSI

Annotated regions:
phrase: LNFTMAAAAKVRELIQEENSADLALRVYIQGGGCSGFQYGFEFDENRADDDLVLETDGVVLLVDPLSLQYLLGAEVDYTESLTGAKFVIRNPNAKTTCGC
type: DOMAIN
name: FeS_biogenesis
description: FeS cluster biogenesis

phrase: FVIRNPNAKTTCGCGSS
type: CONSERVED_SITE
name: FeS_cluster_insertion_CS
description: FeS cluster insertion, C-terminal, conserved site
Protein sequence:
MTSETVIAPSLSTAQNDGTFTYDKVKSTAKERKHLNLKNPSDANEIKSKIWNYYSLSELIQYLGQKENDDFKYKRITLQFPDNLICDSATIVHELQRELNIVPQANQDTGESNTAQRVWILADTSYSACCVDEVAAEHVRSDLVVHFGDACLNEIDKLQAVFVLGKPTLDVDAIVKQIKTAYSTEQKVVLMSDAPHTYLLPEIAKQLPDYDILIADLPKTSRAKIIGYTPPPTGHKKFNRVFNTDTVEFGKYELFHITSPESPRLLQLTTNFASVTTYDPISGTVSTGPFPNLMRRYKYVHQARMAGTVGILVNTLSLANTKVLLNTIKEKIKEAGKKHYIFVVGKPNVAKLANFESVDIWCILGCDHQGIIIDQINEYYKPIVTPYELLLGLSDELSWTGKWVVDYKSVLEEYGNEVIQQNEDPDTDEDLPPVFDPVTGRYVSTSKPLRQINHLMVTSSEQGGVDDHDNQLVKRFSNAVAIKGTVSTSAIHLQNRHWTGLGSDYTEDENAAGALVEDGRKGIARGYDI

Annotated regions:
Protein sequence:
MDLDKPSVWGSLKQRTRPLLINLSKKKAKKSPSKPLDLRVQHHLDRRLSLSVPDLLEAEALAPEGRPYSGPQSSYISVPNSLSTAGIVPKSSSSSLKQSEEELDWSQEEASHVHGVDTDSEEIYASPAEEWQAFSQSALDLHKPSLGRDAPEEHDKTHGNDDLNASMTSQHFEEESTLGEASDCVSHLPSPFAYLLTIHLKEGRNLVVRDRCGTSDPYVKFKLNGKTLYKSKVIYKNLNPIWDEIVVLPIQSLDQKLRVKVYDRDLTKSDFMGSAFVVLRDLELNRTTEHILKLEDPNSLEDDMGVIVLNLNLVVKQGDFKRHRWSNRKRLSASKSSLIRNLRLSESLRKNQLWNGIISITLLEGKNVSGGNMTEMFVQLKLGEQRYKSKTLCKSANPQWQEQFDFHYFSDRMGILDIEVWGKDSKKHEERLGTCKVDISALPLKQDNCLELPLESCQGALLMLITLTPCTGVSISDLCVCPFEDPSERQQISQRYAFQNSLKDVKDVGILQVKVLKASDLLAADFSGKSDPFCLLELGNDRLQTHTIYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDGDKAPDFLGKVAIPLLSIRDGQPNCYVLKNKDLEQAFKGLIYLELDLIYNPVKASIRTFTPREKRFVEDSRKLSKKILSRDVDRVKRLTLAIWNTVQFFKSCFQWESTLRSTIAFVVFLVTVWNFELYMIPLALLLLFLYNFLRPMKGKASSTQDSQESTDVEEEGKEEEKESEKKGIIERIYMVQDIVSTVQNILEEVASFGERIKNVFNWTVPFLSLLACLILAITTVILYFIPLRYIILLWGINKFTKKLRNPYSIDNNELLDFLSRVPSDIQKVQYAELKLCGSHSPLRKKRSTV

Annotated regions:
phrase: PSERQQISQRYAFQNSLKDVKDVGILQVKVLKASDLLAADFSGKSDPFCLLELGNDRLQTHTIYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDGDKAPDFLGKVAIPLLSIRDGQPNCYV
type: DOMAIN
name: C2_dom
description: C2 domain

phrase: LTIHLKEGRNLVVRDRCGTSDPYVKFKLNGKTLYKSKVIYKNLNPIWDEIVVLPIQSLDQKLRVKVYDRDLTKSDFMGSAFVVLRDLELNRTTEHIL
type: DOMAIN
name: C2_dom
description: C2 domain

phrase: GILQVKVLKASDLLAADFSGKSDPFCLLELGNDRLQTHTIYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDGDKAPDFLGKVAIPLLSIRDGQ
type: DOMAIN
name: C2_dom
description: C2 domain

phrase: ISITLLEGKNVSGGNMTEMFVQLKLGEQRYKSKTLCKSANPQWQEQFDFHYFSDRMGILDIEVWGKDSKKHEERLGTCKVDISALPLKQD
type: DOMAIN
name: C2_dom
description: C2 domain

phrase: QDSQESTDVEEEGKEEEKESEKKGIIERIYMVQDIVSTVQNILEEVASFGERIKNVFNWTVPFLSLLACLILAITTVILYFIPLRYIILLWGINKFTKKLRNPYSIDNNELLDFLSRVPS
type: DOMAIN
name: MCTP_C
description: Multiple C2 domain and Transmembrane region Proteins, C-terminal

phrase: ILQVKVLKASDLLAADFSGKSDPFCLLELGNDRLQTHTIYKNLNPEWNKVFTFPIKDIHDVLEVTVFDEDGDKAPDFLGKVAIPLLSIRDGQPNCY
type: DOMAIN
name: C2_dom
description: C2 domain

phrase: IISITLLEGKNVSGGNMTEMFVQLKLGEQRYKSKTLCKSANPQWQEQFDFHYFSDRMGILDIEVWGKDSKKHEERLGTCKVDISALPLKQDNCL
type: DOMAIN
name: C2_dom
description: C2 domain

phrase: LLTIHLKEGRNLVVRDRCGTSDPYVKFKLNGKTLYKSKVIYKNLNPIWDEIVVLPIQSLDQKLRVKVYDRDLTKSDFMGSAFVVLRDLELNRTTEH
type: DOMAIN
name: C2_dom
description: C2 domain

phrase: TLGEASDCVSHLPSPFAYLLTIHLKEGRNLVVRDRCGTSDPYVKFKLNGKTLYKSKVIYKNLNPIWDEIVVLPIQSLDQKLRVKVYDRDLTKSDFMGSAFVVLRDLELNRTTEHI
type: DOMAIN
name: C2_dom
description: C2 domain

phrase: SKSSLIRNLRLSESLRKNQLWNGIISITLLEGKNVSGGNMTEMFVQLKLGEQRYKSKTLCKSANPQWQEQFDFHYFSDRMGILDIEVWGKDSKKHEERLGTCKVDISALPLKQDNCLE
type: DOMAIN
name: C2_dom
description: C2 domain
Protein sequence:
MIWNRKTRYTPYEQWPATKLPQLVAQARQSKWRMQHHIQPTSGLLNDPNGFSYFDGQWHLFYQVFPFGPVHGLKSWQHVTSKNLVDWHDEGLAIRPDTPYDSHGAYTGTALPIDDQLFIMYTGNVRTADWQRESYQLGAWMDTDNHIKKLSRPLIAHAPAGYTSSFRDPDLIRNDHGYYALIGAQTTTEIGAILVYFSKDLTTWTCQGELNVPANARGYMIECPNLVWIDQQPVLLFCPQGLSQATIPYQNIYPNMYLVADQLNLAQAQFTEPHALTQLDDGFDVYATQAINAPDGRALAVSWIGLPEISYPTDRENWAHCLSLVKELTLKDGHLYQNPVAAVDDLRTTAHDLVFEQQRATVAALNGSFELLLTVPADKTVTVNIADQQESGQLQVTVDANHGQVMIDRRHTGNSFAEDYGQTRQVELTAHKTIKIRLIIDVSVFECYIDNGYSVMTGRFFLNATPSRLNVQGDTTAVTGKVWEWRQSEHTGVDNNETKIK

Annotated regions:
phrase: HIQPTSGLLNDPN
type: ACTIVE_SITE
name: Glyco_hydro_32_AS
description: Glycoside hydrolase, family 32, active site

phrase: HIQPTSGLLNDPNGFSYFDGQWHLFYQVFPFGPVHGLKSWQHVTSKNLVDWHDEGLAIRPDTPYDSHGAYTGTALPIDDQLFIMYTGNVRTADWQRESYQLGAWMDTDNHIKKLSRPLIAHAPAGYTSSFRDPDLIRNDHGYYALIGAQTTTEIGAILVYFSKDLTTWTCQGELNVPANARGYMIECPNLVWIDQQPVLLFCPQGLSQATIPYQNIYPNMYLVADQLNLAQAQFTEPHALTQLDDGFDVYATQAINAPDGRALAVSWIGLPEISYPTDRENWAHCLSLVKELTLKDGHLYQN
type: DOMAIN
name: Glyco_hydro_32_N
description: Glycosyl hydrolase family 32, N-terminal

phrase: ALNGSFELLLTVPADKTVTVNIADQQESGQLQVTVDANHGQVMIDRRHTGNSFAEDYGQTRQVELTAHKTIKIRLIIDVSVFECYIDNGYSVMTGRFFLNATPSRLNVQGDTTAVTGKV
type: DOMAIN
name: Glyco_hydro_32_C
description: Glycosyl hydrolase family 32, C-terminal
Protein sequence:
MSVTYATLGELKVGSYIVIDGEPCRIVEMSKAKTGKHGSAKAHVVAVCLFSGNKKTLTAPVDARVEVPIIDKRIGQVIADMGDMVQIMDMETYETFEVEKPKDEDLKSKLQPGVEVEYWVVMGRYMITRVRGAPKS

Annotated regions:
phrase: IIDKRIGQVIADMGDMVQIMDMETYETFEVEKPKDEDLKSKLQPGVEVEYWVVMGRYMITRV
type: DOMAIN
name: Transl_elong_IF5A_C
description: Translation elongation factor, IF5A C-terminal

phrase: TGKHGSA
type: PTM
name: Trans_elong_IF5A_hypusine_site
description: Translation elongation factor, IF5A, hypusine site

phrase: TLGELKVGSYIVIDGEPCRIVEMSKAKTGKHGSAKAHVVAVCLFSGNKKTLTA
type: DOMAIN
name: IF5A-like_N
description: Translation initiation factor 5A-like, N-terminal

phrase: IIDKRIGQVIADMGDMVQIMDMETYETFEVEKPKDEDLKSKLQPGVEVEYWVVMGRYMITRV
type: DOMAIN
name: Transl_elong_IF5A_C
description: Translation elongation factor, IF5A C-terminal
Protein sequence:
MENAMSKTLYDKHIDSHTIKELDNEGNVLLYIDRTILNEYTSPQAFSGLREENRDVWNKKSILLNVDHVNPTRPVRDANMTDPGGTLQVNYFRENSKLFDIELFDVTDPRQGIEHVVAHEQGLALPGMVIAAGDSHTTTYGAFGAFGFGIGTSEIEHLLATQTLVYKKLKNMRVTLTGKLPFGTTAKDVIMALVAKIGADGATNYAIEFCGEVIDELSVEGRMTICNMAVECGARGAFMAPDEKVYEYIKGTPRAPKGEMWDLAIAEWRKLKSDNDAVFDKEIHMDCSDLEPFVTWGISPDQADVISGEVPDPNLLPEGQKRKDYQAALEYMGLEPGMKFEEIKISHAFIGSCTNGRIEDLREVAKVLKGRKIAQGVRGMIIPGSTQVRARAEAEGLAKIFIDAGFEWRQSGCSMCLAMNEDVLSPGDRCASGTNRNFAGRQGAGSRTHLMSPAMVAAAAVAGHLVDVRKFVEGD

Annotated regions:
phrase: RTILNEYTSPQAFSGLREENRDVWNKKSILLNVDHVNPTRPVRDANMTDPGGTLQVNYFRENSKLFDIELFDVTDPRQGIEHVVAHEQGLALPGMVIAAGDSHTTTYGAFGAFGFGIGTSEIEHLLATQTLVYKKLKNMRVTLTGKLPFGTTAKDVIMALVAKIGADGATNYAIEFCGEVIDELSVEGRMTICNMAVECGARGAFMAPDEKVYEYIKGTPRAPKGEMWDLAIAEWRKLKSDNDAVFDKEIHMDCSDLEPFVTWGISPDQADVISGEVPDPNLLPEGQKRKDYQAALEYMGLEPGMKFEEIKISHAFIGSCTNGRIEDLREVAKVLKGRKIAQGVRGMIIPGSTQVRARAEAEGLAKIFIDAGFEWRQSGCSMCLAMNEDVLSPGDRCASGTNRNFAGRQGAGSRTHLMS
type: DOMAIN
name: IPMI_cat
description: 3-Isopropylmalate dehydratase, catalytic domain

phrase: GFEWRQSGCSMCL
type: BINDING_SITE
name: Aconitase_4Fe-4S_BS
description: Aconitase family, 4Fe-4S cluster binding site

phrase: IDSHTIKELDNEGNVLLYIDRTILNEYTSPQAFSGLREENRDVWNKKSILLNVDHVNPTRPVRDANMTDPGGTLQVNYFRENSKLFDIELFDVTDPRQGIEHVVAHEQGLALPGMVIAAGDSHTTTYGAFGAFGFGIGTSEIEHLLATQTLVYKKLKNMRVTLTGKLPFGTTAKDVIMALVAKIGADGATNYAIEFCGEVIDELSVEGRMTICNMAVECGARGAFMAPDEKVYEYIKGTPRAPKGEMWDLAIAEWRKLKSDNDAVFDKEIHMDCSDLEPFVTWGISPDQADVISGEVPDPNLLPEGQKRKDYQAALEYMGLEPGMKFEEIKISHAFIGSCTNGRIEDLREVAKVLKGRKIAQGVRGMIIPGSTQVRARAEAEGLAKIFIDAGFEWRQSGCSMCLAMNEDVLSPGDRCASGTNRNFAGRQGAGSRTHLMSPAMVAAAAVA
type: DOMAIN
name: Acoase/IPM_deHydtase_lsu_aba
description: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain

phrase: QVNYFRENSKLFD
type: DOMAIN
name: Acoase/IPM_deHydtase_lsu_aba
description: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain

phrase: LPGMVIAAGDSHT
type: DOMAIN
name: Acoase/IPM_deHydtase_lsu_aba
description: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain

phrase: TYGAFGAFGFGIGTS
type: DOMAIN
name: Acoase/IPM_deHydtase_lsu_aba
description: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain

phrase: GATNYAIEFCGEV
type: DOMAIN
name: Acoase/IPM_deHydtase_lsu_aba
description: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain

phrase: DELSVEGRMTICN
type: DOMAIN
name: Acoase/IPM_deHydtase_lsu_aba
description: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain

phrase: PFVTWGISPDQADV
type: DOMAIN
name: Acoase/IPM_deHydtase_lsu_aba
description: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain

phrase: FIGSCTNGRIE
type: DOMAIN
name: Acoase/IPM_deHydtase_lsu_aba
description: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain

phrase: GFEWRQSGCSMCL
type: DOMAIN
name: Acoase/IPM_deHydtase_lsu_aba
description: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain

phrase: ISHAFIGSCTNGRIED
type: BINDING_SITE
name: Aconitase_4Fe-4S_BS
description: Aconitase family, 4Fe-4S cluster binding site
Protein sequence:
MAGGTPGGEATVGSGEPRLKGHATPETIATGCIAWVDKEGQPRRAEILSIKTTKSGKQFYCNFDNFNKRLDEWVPVARIDFTREVEWPNPDKDKPKDPKTKKASAAQSKKQSKKAQKRLSKREQSVASEANTPHPWTDFVDSQGRQKSSSLGPDGDSQTRPSVEGGATPAVDDMDMDEKETEVKREPAEFSREVEIEKLRTSGSMTQNPTEVSRIRNISKVQFGKHDLYPWYFSPYPEVFNQEDVIFICEFCLSYYGDEKAFTRHRRKCTLQHPPGNEIYRDEAISFFEIDGRRQRTWCRNLCLLSKMFLDHKTLYYDVDPFLFYVMTTRTEKGCHLVGYFSKEKESADGYNVACILTLPQYQRKGYGRLLIQFSYELSKIEGKLGSPEKPLSDLGLLSYRQYWSENILELLMGFNEREEKVTIETISTSLAMTTQDVEHTLQAMRMQVYHKSDHKIVIPEKLIQQREKSKLKRKRIVDPTKIQWKPPVFTASSRTWGW

Annotated regions:
phrase: ATGCIAWVDKEGQPRRAEILSIKTTKSGKQFYCNFDNFNKRLDEWVPVARID
type: DOMAIN
name: Tudor-knot
description: RNA binding activity-knot of a chromodomain

phrase: PPGNEIYRDEAISFFEIDGRRQRTWCRNLCLLSKMFLDHKTLYYDVDPFLFYVMTTRTEKGCHLVGYFSKEKESADGYNVACILTLPQYQRKGYGRLLIQFSYELSKIEGKLGSPEKPLSDLGLLSYRQYWSENILELLMGFNEREEKVTIETISTSLAMTTQDVEHTLQAMRMQVYHK
type: DOMAIN
name: HAT_MYST-type
description: Histone acetyltransferase domain, MYST-type

phrase: SRIRNISKVQFGKHDLYPWYFSPYPEVFNQEDVIFICEFCLSYYGDEKAFTRHRRKCTLQHPPGNEIYRDEAISFFEIDGRRQRTWCRNLCLLSKMFLDHKTLYYDVDPFLFYVMTTRTEKGCHLVGYFSKEKESADGYNVACILTLPQYQRKGYGRLLIQFSYELSKIEGKLGSPEKPLSDLGLLSYRQYWSENILELLMGFNEREEKVTIETISTSLAMTTQDVEHTLQAMRMQVYHKSDHKIVIPEKLIQQREKSKLKRKRIVDPTKIQWK
type: DOMAIN
name: HAT_MYST-type
description: Histone acetyltransferase domain, MYST-type

phrase: IRNISKVQFGKHDLYPWYFSPYPEVFNQEDVIFICEFCLSYYGDEKAFTRHRRK
type: DOMAIN
name: Zf-MYST
description: MYST, zinc finger domain
Protein sequence:
MRFSWKNICLPISCINNTNQKKTTTTNPPKEKLLLLSRQTSVPSRVYMSDFSNSTISLNDFSNSFFINIHIFTYEELKTITQGFSKYNFLGEGGFGEVYKGFVDDSLKTGLKDQPVAVKALKREGGQGHREWLAEVIILGQLKHPHLVNLVGYCCEDDERLLVYEYMERGNLEDHLFQKYGGALPWLTRVKILLGAAKGLEFLHKQEKPVIYRDFKPSNILLSSDFSSKLSDFGLATDGSEEEDSNFTKSVMGTEGYAAPEYISAGNLTTMSDVFSFGVVLLEMLTARKAVEKYRAQRGRNLVEWARPMLKDPNKLERIIDPSLEGKYSVEGIRKAAALAYQCLSHNPKSRPTMTTVVKTLEPILDLKDIQNGPFVYIVPVAGVSEVHEIKCKDDVKVVKEETEKDAKVFPRHRAGRRNRRKHKAMRSRAVYSDTALYKSLGTSLYNPAN

Annotated regions:
phrase: KYNFLGEGGFGEVYKGFVDDSLKTGLKDQPVAVKALKREGGQGHREWLAEVIILGQLKHPHLVNLVGYCCEDDERLLVYEYMERGNLEDHLFQKYGGALPWLTRVKILLGAAKGLEFLHKQEKPVIYRDFKPSNILLSSDFSSKLSDFGLATDGSEEEDSNFTKSVMGTEGYAAPEYISAGNLTTMSDVFSFGVVLLEMLTARKAVEKYRAQRGRNLVEWARPMLKDPNKLERIIDPSLEGKYSVEGIRKAAALAYQCLSHNPKSRPTMTTVV
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: VIYRDFKPSNIL
type: ACTIVE_SITE
name: Ser/Thr_kinase_AS
description: Serine/threonine-protein kinase, active site

phrase: FSKYNFLGEGGFGEVYKGFVDDSLKTGLKDQPVAVKALKREGGQGHREWLAEVIILGQLKHPHLVNLVGYCCEDDERLLVYEYMERGNLEDHLFQKYGGALPWLTRVKILLGAAKGLEFLHKQEKPVIYRDFKPSNILLSSDFSSKLSDFGLATDGSEEEDSNFTKSVMGTEGYAAPEYISAGNLTTMSDVFSFGVVLLEMLTARKAVEKYRAQRGRNLVEWARPMLKDPNKLERIIDPSLEGKYSVEGIRKAAALAYQCLSHNPKSRPTMTTVVKTLEPI
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: LGEGGFGEVYKGFVDDSLKTGLKDQPVAV
type: BINDING_SITE
name: Protein_kinase_ATP_BS
description: Protein kinase, ATP binding site
Protein sequence:
MGKKRTKGKNIQTDETQQILEPVCKHIRKGLEQGHLKKLLPNVEWNVCQDCKTDNKTRDNSEEEVEESPSIWLCLKCGHRGCGRNSQEQHALKHYSAPRSEPHCLVLSLDNWSVWCYLCDNEVPYNSSTRLGQLVDYVRKQACIDLQSAVSKDQENKEFENRKVEKDNRNEQEKERKECMTKEDNSSNTNAEMTVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKETKMPGTTVNIEPSEFSTEPLVIKLEQPGPLTLAMCQFLSEMQETKKGTVTPKELFAQVCKKSIRFKGYQQQDSQELLRYLLDGMRAEEIHRVSAGIFKALNDSDQKNEEELKKKIKEFEKKKAIPSFVDRIFGGELTSTIMCEECRTVSLVHESFLDLSLPVLDDQKNSNEKNVKKLKAKEFEDAAADEDKDNDSYMKERGDNPGASKHLQKKAKKQAKKQAKNQRRQQKIQGKVLQISNVCSTTECEENVKEDKETKGEMNSEVTDLKQEEPSSNQCEELCLNQKDSNDQENRMDVYSAHESIGFPEQECEDNETSVDVTVEDLVSTTEHIVGLDNLSIKDYHGEQQELATNLEKLHLDVTDSDTDILDELHVAQPKTYEVVNEDPEIAFCSLANREDLNVEDGSILHCLYQFTCNEKLSETNKLLCDVCTQRRYGPKTSGKSEKHVYTNAKKQMLISLAPPILTLHLKRFQQAGFNLRKVNKHIKFPEVIDLAPFCAIKCKNVGEGNTKILYSLYGVVEHSGTMRSGHYTAYAKMRTVRN

Annotated regions:
phrase: YSLYGVVEHSGTMRSGH
type: CONSERVED_SITE
name: USP_CS
description: Ubiquitin specific protease, conserved site

phrase: GLSNLGNTCFFNAVMQNLSQTPVLRELLKETKMPGTTVNIEPSEFSTEPLVIKLEQPGPLTLAMCQFLSEMQETKKGTVTPKELFAQVCKKSIRFKGYQQQDSQELLRYLLDGMRAEEIHRVSAGIFKALNDSDQKNEEELKKKIKEFEKKKAIPSFVDRIFGGELTSTIMCEECRTVSLVHESFLDLSLPVLDDQKNSNEKNVKKLKAKEFEDAAADEDKDNDSYMKERGDNPGASKHLQKKAKKQAKKQAKNQRRQQKIQGKVLQISNVCSTTECEENVKEDKETKGEMNSEVTDLKQEEPSSNQCEELCLNQKDSNDQENRMDVYSAHESIGFPEQECEDNETSVDVTVEDLVSTTEHIVGLDNLSIKDYHGEQQELATNLEKLHLDVTDSDTDILDELHVAQPKTYEVVNEDPEIAFCSLANREDLNVEDGSILHCLYQFTCNEKLSETNKLLCDVCTQRRYGPKTSGKSEKHVYTNAKKQMLISLAPPILTLHLKRFQQAGFNLRKVNKHIKFPEVIDLAPFCAIKCKNVGEGNTKILYSLYGVVEHSGTMRSGHYTAYA
type: DOMAIN
name: Peptidase_C19_UCH
description: Peptidase C19, ubiquitin carboxyl-terminal hydrolase

phrase: CQDCKTDNKTRDNSEEEVEESPSIWLCLKCGHRGCGRNSQEQHALKHYSAPRSEPHCLVLSLDNWSVWCYLCDNEV
type: DOMAIN
name: Znf_UBP
description: Zinc finger, UBP-type

phrase: GLSNLGNTCFFNAVM
type: CONSERVED_SITE
name: USP_CS
description: Ubiquitin specific protease, conserved site

phrase: PVCKHIRKGLEQGHLKKLLPNVEWNVCQDCKTDNKTRDNSEEEVEESPSIWLCLKCGHRGCGRNSQEQHALKHYSAPRSEPHCLVLSLDNWSVWCYLCDNEVPYNSSTRLGQLVDYVRKQ
type: DOMAIN
name: Znf_UBP
description: Zinc finger, UBP-type

phrase: KGLSNLGNTCFFNAVMQNLSQTPVLRELLKETKMPGTTVNIEPSEFSTEPLVIKLEQPGPLTLAMCQFLSEMQETKKGTVTPKELFAQVCKKSIRFKGYQQQDSQELLRYLLDGMRAEEIHRVSAGIFKALNDSDQKNEEELKKKIKEFEKKKAIPSFVDRIFGGELTSTIMCEECRTVSLVHESFLDLSLPVLDDQKNSNEKNVKKLKAKEFEDAAADEDKDNDSYMKERGDNPGASKHLQKKAKKQAKKQAKNQRRQQKIQGKVLQISNVCSTTECEENVKEDKETKGEMNSEVTDLKQEEPSSNQCEELCLNQKDSNDQENRMDVYSAHESIGFPEQECEDNETSVDVTVEDLVSTTEHIVGLDNLSIKDYHGEQQELATNLEKLHLDVTDSDTDILDELHVAQPKTYEVVNEDPEIAFCSLANREDLNVEDGSILHCLYQFTCNEKLSETNKLLCDVCTQRRYGPKTSGKSEKHVYTNAKKQMLISLAPPILTLHLKRFQQAGFNLRKVNKHIKFPEVIDLAPFCAIKCKNVGEGNTKILYSLYGVVEHSGTMRSGHYTAYAKMRTVR
type: DOMAIN
name: USP_dom
description: Ubiquitin specific protease domain

phrase: VCQDCKTDNKTRDNSEEEVEESPSIWLCLKCGHRGCGRNSQEQHALKHYSAPRSEPHCLVLSLDNWS
type: DOMAIN
name: Znf_UBP
description: Zinc finger, UBP-type
Protein sequence:
MGPLRVFTDNKVKVMLLNPIGGAGFNDFVVETVLNHKDPSTHVTITSLANRIGGNQTLAYPSIRPLLYGEMIRVCLQARKENYDVLIINCFGDPMVDELQQIAGDDMVILGARQVAVQTASKISSKYAVLLPYDMKSSPDPLHQRVVADTRTAVAHPVVDMAFNDDLTPMDGESLGERLATQGKLAIKENGAEVLVLGCTAMVGCWQGLMRAVGVPVIDPTVAALRAAGKAGRLKRELVGGASTKRSGTFPTEKELKMIAESEPSYPFSGRIEI

Annotated regions:
Protein sequence:
ATYKVKFITPEGEQEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGFVDQSDESFLDDDQIAEGFVLTCAAYPTSDVTIETHKEEELV

Annotated regions:
phrase: YKVKFITPEGEQEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGFVDQSDESFLDDDQIAEGFVLTCAAYPTSDVTIETHKE
type: DOMAIN
name: 2Fe-2S_ferredoxin-type
description: 2Fe-2S ferredoxin-type iron-sulfur binding domain

phrase: CRAGSCSS
type: BINDING_SITE
name: 2Fe2S_fd_BS
description: 2Fe-2S ferredoxin, iron-sulphur binding site

phrase: VKFITPEGEQEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGFVDQSDESFLDDDQIAEGFVLTCAAYPTSDVTI
type: DOMAIN
name: 2Fe-2S_ferredoxin-type
description: 2Fe-2S ferredoxin-type iron-sulfur binding domain

phrase: TPEGEQEVECDDDVYVLDAAEEAGIDLPYSCRAGSCSSCAGKVVSGFVDQSDESFLDDDQIAEGFVLTCAAYP
type: DOMAIN
name: 2Fe-2S_ferredoxin-type
description: 2Fe-2S ferredoxin-type iron-sulfur binding domain
Protein sequence:
MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIAARKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFDKLTKKEALMRTRELDKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVSLYLGAVAATVREGRSQDLASQAEESFVEAE

Annotated regions:
phrase: PDALFVIDADHEHIAIKEANNLGI
type: CONSERVED_SITE
name: Ribosomal_uS2_CS
description: Small ribosomal subunit protein uS2, conserved site

phrase: MRDMLKAGVHF
type: CONSERVED_SITE
name: Ribosomal_uS2_CS
description: Small ribosomal subunit protein uS2, conserved site
Protein sequence:
MTQTHSTELFKPNRAFAKTARIKNLCEYEDLRLDAEEDFEGFWGKLAKEKIDWMEPFSKVLDESEAPFYKWFVGGKLNVCAQCLDRHLDTRKNKAAIIFEGELGDSRIITYRELFYEVKRTANLLKNKFNVKKGDRVVIYMPMIPEAAFMMLACARIGAIHSVVFGGFSAEALRDRIIDAEAKLVITADGAYRRGKPYMLKPVVDDALAEGACPSIEKVLIVIRNKEEINYVPGRDYIYNEMIGLESAHCPPEPMDAEDPLFLLYTSGSTGKPKGVQHNQAGYILWAQTTMEWVFDVKENDTYWCTADVGWITGHTYIVYGPLAMGATTVMYEGVPIYPDTGRWWKMIEHYRVNQFYTAPTAIRLLHKEGKEEPKKYNLSNLKVLGTVGEPINPDAWNWYYNEIGGGQCPIVDTWWQTETGGHMISPLPGATPIKPGCATLPLPGIFAEVIDEEGNPKPAGEQGYLCITKPWPSMIRNIWGDPKRYESSYFSTCKKNGKPVYFAGDGAIRDERGYITITGRMDDVINVSGHRLGTAEIESAIAKHPGVAETAVVSRLDEIKGESVYAFIVLKPGYEDNVAEELQLLKEINAVITREIGPLAKADTMLFVPGLPKTRSGKIMRRILRSIARGEEITQDTSTLEDPAIVQKIQQLA

Annotated regions:
phrase: LLYTSGSTGKP
type: CONSERVED_SITE
name: AMP-binding_CS
description: AMP-binding, conserved site

phrase: EIESAIAKHPGVAETAVVSRLDEIKGESVYAFIVLKPGYEDNVAEELQLLKEINAVITREIGPLAKADTMLFVPGLPKTRSG
type: DOMAIN
name: AMP-bd_C
description: AMP-binding enzyme, C-terminal domain

phrase: YEDLRLDAEEDFEGFWGKLAKEKIDWMEPFSKVLDESEAPFYKWFVGGKLNVCAQ
type: DOMAIN
name: ACAS_N
description: Acetyl-coenzyme A synthetase, N-terminal domain

phrase: DRHLDTRKNKAAIIFEGELGDSRIITYRELFYEVKRTANLLKNKFNVKKGDRVVIYMPMIPEAAFMMLACARIGAIHSVVFGGFSAEALRDRIIDAEAKLVITADGAYRRGKPYMLKPVVDDALAEGACPSIEKVLIVIRNKEEINYVPGRDYIYNEMIGLESAHCPPEPMDAEDPLFLLYTSGSTGKPKGVQHNQAGYILWAQTTMEWVFDVKENDTYWCTADVGWITGHTYIVYGPLAMGATTVMYEGVPIYPDTGRWWKMIEHYRVNQFYTAPTAIRLLHKEGKEEPKKYNLSNLKVLGTVGEPINPDAWNWYYNEIGGGQCPIVDTWWQTETGGHMISPLPGATPIKPGCATLPLPGIFAEVIDEEGNPKPAGEQGYLCITKP
type: DOMAIN
name: AMP-dep_synth/lig_dom
description: AMP-dependent synthetase/ligase domain
Protein sequence:
MENMFRLMGSEDSSDRRRCIWVNGPVIVGAGPSGLATAACLREEGVPFVVLERADCIASLWQKRTYDRIKLHLPKKVCQLPKMPFPEDYPEYPTKRQFIEYLESYANKFEITPQFNECVQSARYDETSGLWRIKTTSSSSSGSEMEYICRWLVVATGENAEKVVPEIDGLTTEFEGEVIHSCEYKSGEKYRGKSVLVVGCGNSGMEVSLDLANHNANASMVVRSSVHVLPREILGKSSFEISMMLMKWFPLWLVDKILLILAWLILGNLTKYGLKRPTMGPMELKIVSGKTPVLDIGAMEKIKSGEVEIVPGIKRFSRSHVELVDGQRLDLDAVVLATGYRSNVPSWLQENDLFSKNGFPKSPFPNAWKGKSGLYAAGFTRKGLAGASADAVNIAQDIGNVWREETKRQKMRTRVGHRRCISVA

Annotated regions:
Protein sequence:
MNLRELLAVVNGLECPQSADVEVQGIKTNSHACGVGDLFIGMPGTRVDGGEFWESALAAGAVAAIISPDAIAKYPPKQSEMVISASNMNKVCAEISAAFYGYPGRRLKMVGVTGTNGKTTTTHLIEYFLTKAHLATALLGTLYTRWPGFSQTAVNTTPFAVDLQQRLAQAVDAGCEFGVMEVSSHGLSQDRVLGCPFEVAVFTNLTQDHLDYHKDMEDYFGAKALLFSPDYLQGRAIINADDEYGKRLIAGLGKDRVWTYSVNDHTADLWMSGLNYQPTGVSGILHTPKGDVAFSSPLVGQYNLENVLAAVGAVLHLGLDLQVVAKSIPDFPGVPGRMERVQISDHQDISVIVDYAHTPDSLENLLKAARPFIPGRMICVFGCGGDRDRTKRPKMGKIAAELADIAVVTSDNPRTENPDKILEDILAGIPDVVQAVVIGDRATAIRTAILEAQPGDGVLLAGKGHEDYQILGTEKIHFDDREQAREALQERGDR

Annotated regions:
phrase: EVQGIKTNSHACGVGDLFIGMPGTRVDGGEFWESALAAGAVAAIISPDAIAKYPPKQSEMVISASNMNKVCAEISAAF
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: GRMERVQISDHQDISVIVDYAHTPDSLENLLKAARPFIPGRMICVFGCGGDRDRTKRPKMGKIAAELADIAVVTSDNPRTENPDKILEDILAGIPDVVQAVVIGDRATAIRTAILEAQPGDGVLLAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: VTGTNGKTTTTHLIEYFLTKAHLATALLGTLYTRWPGFSQTAVNTTPFAVDLQQRLAQAVDAGCEFGVMEVSSHGLSQDRVLGCPFEVAVFTNLTQDHLDYHKDMEDYFGAKALLFSPDYLQGRAIINADDEYGKRLIAGLGKDRVWTYSVNDHTADLWMSGLNYQPTGVSGILHTPKGDVAFSSPLVGQYNLENVLAAVG
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central