nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTRTPTTRMGLLEVRGRADVASKGARLLRAKREVLAGELWKLTREVLAGRARLDEVLRGAVKALGLARALEGEEALASVALTAAREVPLQVSVRRVWGVPTPSVAAPALIRAADERGSSPTSWGLAGTEAARRHEEALEVLLRIASRELHLARLGEEIQATSRRINALEQLVLPALTAESGRIEAALEERDREDVVRLKRFRARRPRREASARRP

Annotated regions:
Protein sequence:
MQLEKELSRRKIKELLLEILSIYTPSGEEERAKDFFEKVSKEFNLNLEISKSKSYFLGKGDILLASHIDTVPGFIQPKIEGEVIYGRGAVDAKGPLIAMLLATYILNEKGYKVQFAALADEEGKSKGARELANSGIRYNYIIIGEPSNTLDVIVEYRGVLHLDILCRGNSQHSSSSKENLIVDLSKKILEIYREPSNYENFSIVPTIIKSGDYINMTPSEGYLHLDIRYSIKNSKDEILALIHNEFKTCDIKIVEDIEPVKVDVNSNIVKAVMRGIIKQGYKPKLARKAGTSDMNILKNIAKEIVTYGPGNSTLEHTNNEKISIDEIFIALTTYINAIEELCLKKK

Annotated regions:
phrase: AVDAKGPLIAMLLATYILNEKGYKVQFAALADEE
type: CONSERVED_SITE
name: ArgE/DapE_CS
description: ArgE/DapE/ACY1/CPG2/YscS, conserved site

phrase: RGVLHLDILCRGNSQHSSSSKENLIVDLSKKILEIYREPSNYENFSIVPTIIKSGDYINMTPSEGYLHLDIRYSIKNSKDEILALIHNEF
type: DOMAIN
name: Peptidase_M20_dimer
description: Peptidase M20, dimerisation domain

phrase: ILLASHIDT
type: CONSERVED_SITE
name: ArgE/DapE_CS
description: ArgE/DapE/ACY1/CPG2/YscS, conserved site
Protein sequence:
MRFYKIISFMLLGLDDTDSPDGMCTTYLGALIANELKRRGFTVTNHRLVRLNPNVIWKTRGNAGISLEISGGDSTVVFEIACEFVERFARFECEKTNPGVVVVESPPDPAFYYQALQRFCTIEETVKRLERIGALYKGYKNGRGLIGALAAVSSVLPDKTYECLAYRKNEVLGTPRIYAEEGFFTSEEQTAPHTWDTVDFIRREIVCVPHGKDPVLYGIRGDTPKWAIKATGFLETEEPAFSQIWETNQGTDAHLLPLPDGGPIEGESYRFSGVVESLPITNRGGHVQFTILSNGMEIPVFAFEPTKYFRNAVRELVVGDEITICGSFQKGVLHLEKFRPNLLATQKSRSSPRCPICGGRMTSAGKDKGYKCRECSGKVRDVPDQERTLQTKWYEVPPGSRRHLAKPAVRMKDDI

Annotated regions:
phrase: LGLDDTDSPDGMCTTYLGALIANELKRRGFTVTNHRLVRLNPNVIWKTRGNAGISLEISGGDSTVVFEIACEFVERFARFECEKTNPGVVVVESPPDPAFYYQALQRFCTIEETVKRLERIGAL
type: DOMAIN
name: TiaS-like_TCKD
description: TiaS-like, TCKD domain

phrase: GRGLIGALAAVSSVLPDKTYECLAYRKNEVLGTPRIYAEEGFFTSEEQTAPHTWDTVDFIRREIVCVPHGKDPVLYGIRGDTPKWAIKATGFLETEEPAFSQIWETNQGTDA
type: DOMAIN
name: TiaS_FLD
description: TiaS, FLD domain

phrase: PRCPICGGRMTSAGKDKGYKCRECSG
type: DOMAIN
name: Zn_ribbon_TiaS
description: TiaS, C-terminal zinc ribbon domain
Protein sequence:
MHKVLAIETSCDETSVSIVSNIGDTFRIHSNIIASQIEDHSKWGGVVPELAARKHLELLPFVLEKALEQAKIKIEEVDYIASTVAPGLVGCLRVGSITARSLCMLHSKPFLGIHHLEGHLSSILFSENYPKKSFLTLLVSGGHTELIKVDDNRGMQRLGKSFDDAAGEAFDKVGRLLGLGYPGGPAIEKIAKNGDPMKFNLPKCRISDKKGGFLKYDFSFSGLKTAVLRLVERINLAGKTVPIPDIAASFERVVAEVLVERTIKCAEDHRLDNVVVVGGVAANNTLRKMMISEASKKSIKVHLAPLDLCTDNAAMIGAAALFRIKFKDHLSNLKLGVAGRLSIEQANTLYEENPPF

Annotated regions:
phrase: IHSNIIASQIEDHSKWGGVVPELAARKHLELLPFVLEKALEQAKIKIEEVDYIASTVAPGLVGCLRVGSITARSLCMLHSKPFLGIHHLEGHLSSILFSENYPKKSFLTLLVSGGHTELIKVDDNRGMQRLGKSFDDAAGEAFDKVGRLLGLGYPGGPAIEKIAKNGDPMKFNLPKCRISDKKGGFLKYDFSFSGLKTAVLRLVERINLAGKTVPIPDIAASFERVVAEVLVERTIKCAEDHRLDNVVVVGGVAANNTLRKMMISEASKKSIKVHLAPLDLCTDNAAMI
type: DOMAIN
name: Gcp-like_dom
description: Gcp-like domain

phrase: KVLAIETSCDETSVSIVSNIGDTFRIHSNIIASQIEDHSKWGGVVPELAARKHLELLPFVLEKALEQAKIKIEEVDYIASTVAPGLVGCLRVGSITARSLCMLHSKPFLGIHHLEGHLSSILFSENYPKKSFLTLLVSGGHTELIKVDDNRGMQRLGKSFDDAAGEAFDKVGRLLGLGYPGGPAIEKIAKNGDPMKFNLPKCRISDKKGGFLKYDFSFSGLKTAVLRLVERINLAGKTVPIPDIAASFERVVAEVLVERTIKCAEDHRLDNVVVVGGVAANNTLRKMMISEASKKSIKVHLAPLDLCTDNAAMIGAAALFRI
type: DOMAIN
name: Gcp-like_dom
description: Gcp-like domain
Protein sequence:
MTTLHFSGFPRVGAFRELKFAQEKYWRKEISEQELLAVAKDLREKNWKHQAAANADYVAVGDFTFYDHILDLQVATGAIPARFGFDSQNLSLEQFFQLARGNKDQFAIEMTKWFDTNYHYLVPEFHADTEFKANAKHYVQQLQEAQALGLKAKPTVVGPLTFLWVGKEKGAVEFDRLSLLPKLLPVYVEILTALVEAGAEWIQIDEPALTVDLPKEWVEAYKDVYATLSKVSAKILLSTYFGSVAEHAALLKSLPVDGLHIDLVRAPEQLDAFADYDKVLSAGVIDGRNIWRANLNKVLETVELLQAKLGDRLWISSSCSLLHTPFDLSVEEKLKANKPDLYSWLAFTLQKTQELRVLKAALNEGRDSVAEELAASQAAADSRANSSEIHRADVAKRLADLPANADQRKSPFADRIKAQQAWLNLPLLPTTNIGSFPQTTEIRQARAAFKKGELSAADYEAAMKKEIALVVEEQEKLDLDVLVHGEAERNDMVEYFGELLSGFAFTQYGWVQSYGSRCVKPPIIFGDVSRPEAMTVAWSTYAQSLTKRPMKGMLTGPVTILQWSFVRNDIPRSTVCKQIALALNDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLNWAGESFRLSSTGCEDSTQIHTHMCYSEFNDILPAIAAMDADVITIETSRSDMELLTAFGEFKYPNDIGPGVYDIHSPRVPTEAEVEHLLRKAIEVVPVERLWVNPDCGLKTRGWKETLEQLQVMMNVTHKLRAELAK

Annotated regions:
phrase: PTTNIGSFPQTTEIRQARAAFKKGELSAADYEAAMKKEIALVVEEQEKLDLDVLVHGEAERNDMVEYFGELLSGFAFTQYGWVQSYGSRCVKPPIIFGDVSRPEAMTVAWSTYAQSLTKRPMKGMLTGPVTILQWSFVRNDIPRSTVCKQIALALNDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLNWAGESFRLSSTGCEDSTQIHTHMCYSEFNDILPAIAAMDADVITIETSRSDMELLTAFGEFKYPNDIGPGVYDIHSPRVPTEAEVEHLLRKAIEVVPVERLWVNPDCGLKTRGWKETLEQLQV
type: DOMAIN
name: Met_Synth_C/arc
description: Cobalamin-independent methionine synthase MetE, C-terminal/archaeal

phrase: LPTTNIGSFPQTTEIRQARAAFKKGELSAADYEAAMKKEIALVVEEQEKLDLDVLVHGEAERNDMVEYFGELLSGFAFTQYGWVQSYGSRCVKPPIIFGDVSRPEAMTVAWSTYAQSLTKRPMKGMLTGPVTILQWSFVRNDIPRSTVCKQIALALNDEVLDLEKAGIKVIQIDEPAIREGLPLKRADWDAYLNWAGESFRLSSTGCEDSTQIHTHMCYSEFNDILPAIAAMDADVITIETSRSDMELLTAFGEFKYPNDIGPGVYDIHSPRVPTEAEVEHLLRKAIEVVPVERLWVNPDCGLKTRGWKETLEQLQVMMNVT
type: DOMAIN
name: Met_Synth_C/arc
description: Cobalamin-independent methionine synthase MetE, C-terminal/archaeal

phrase: HFSGFPRVGAFRELKFAQEKYWRKEISEQELLAVAKDLREKNWKHQAAANADYVAVGDFTFYDHILDLQVATGAIPARFGFDSQNLSLEQFFQLARGNKDQFAIEMTKWFDTNYHYLVPEFHADTEFKANAKHYVQQLQEAQALGLKAKPTVVGPLTFLWVGKEKGAVEFDRLSLLPKLLPVYVEILTALVEAGAEWIQIDEPALTVDLPKEWVEAYKDVYATLSKVSAKILLSTYFGSVAEHAALLKSLPVDGLHIDLVRAPEQLDAFADYDKVLSAGVIDGRNIWRANLNKVLETVELLQA
type: DOMAIN
name: Cbl-indep_Met_Synth_N
description: Cobalamin-independent methionine synthase MetE, N-terminal
Protein sequence:
MKLTIISGRSGSGKTTALQALEDQGFYCVDNLPVGMLPTLAKQLSEGDPPIERVAVGIDARNLPAQLLAFDNILHALNEQQVRSEIIYLDADDHTLLTRFSATRRRHPLGTDQRSLADAIGHERELLANIRQRADLVIDSSNHDVHTLRNLMRERVARREATLSLQLESFGFKNGLPTDADLVFDVRVLPNPHWHADLRPFTGKDDCIIEFLSQHQASHDMLKDIGDFVVRWLPAFANSDRSYVTVAIGCTGGRHRSVFITEQLAKNLRAEGIVLQVRHREL

Annotated regions:
phrase: SLQLESFGFKNGLPTDADLVFDVRVLPNPHWHADLRPFTGKDDCIIEFLSQHQASHDMLKDIGDFVVRWLPAFANSDRSYVTVAIGCTGGRHRSVFITEQLAKNLRAEGIVLQVRHRE
type: DOMAIN
name: RapZ_C
description: RapZ, C-terminal domain

phrase: MKLTIISGRSGSGKTTALQALEDQGFYCVDNLPVGMLPTLAKQLSEGDPPIERVAVGIDARNLPAQLLAFDNILHALNEQQVRSEIIYLDADDHTLLTRFSATRRRHPLGTDQRSLADAIGHERELLANIRQRADLVIDSSNHDVHTLRNLMRERV
type: DOMAIN
name: RapZ-like_N
description: RapZ-like, N-terminal domain
Protein sequence:
MANVIVVGAQWGDEGKGKITDLLSVSADVVVRYQGGINAGHTVCVGEQTFKLHLIPSGILYPETCCVIASGTVVDPKVLLEEIRHLEELGISTKNLFIAETAHVTMPYHRLIDIAEEERRGKNRIGTTGRGIGPTYADKSGRTGFRVLDLMQPEGFREKLEWIVPLKNVLLERLYNLPPLAVDQVAEQYLAYAEQLRPYVIDASLLIDQAVRTHRNILFEGAQGTLLDLDHGTYPYVTSSNPVAGGACVGAGVGPTIIDRVIGVAKAYTTRVGEGPFPTELRDEVGRHLGERGAEFGTTTGRPRRCGWFDAVIGRYAVRINGLDCLAITKLDVLDELESIKVCVAYHCPSKTVEEFPSDANLFGRCEPVYETLPGWKEPTGHCRTLEELPPKARDYLEFLAHQMKTPIALVSVGANREQTIIVEDPIHGPKRGLLGHNGD

Annotated regions:
phrase: QWGDEGK
type: BINDING_SITE
name: Adenylosuccin_syn_GTP-bd
description: Adenylosuccinate synthase, GTP-binding site

phrase: GIGPTYADKSG
type: ACTIVE_SITE
name: Adenylosuccin_syn_Lys_AS
description: Adenylosuccinate synthase, active site
Protein sequence:
MIKPEARLHILYDISKELISSFPLDNLLKAAMNALVEHLRLRDGGIVIHGSGGEPWINVRAPIGDDVRSRSLTIEQADAINRVIASGEKHFGKNSVVLPVKVNRKAIGALWIDFAQKSGAQDESLLAMIAVLIGLTCQRDRELCSDGGSVAEEQQAGQIPKIKPKPHPTQLDKIDWIVGESPALKRVLATTKIVAATNSAVLLRGESGTGKECFARAIHALSIRKSKAFIKLNCAALSETVLESELFGHEKGAFTGALLQRAGRFELANGGTLLLDEIGDVSPQFQAKLLRVLQEGEFERLGGTKTLKVDVRVICATNKNLEVAVLRGEFRADLYYRINVVPIILPPLRQRDGDISLLAQVFLEQFNNANDRNCDFGPSAIDILSKCAFPGNVRELDNCVQRTATLASSNTITSSDFACQQDQCSSALLRKADGDGIGNDAMNGLNSRDTMSGGLCAHAGTPSGAAATIEAAGLTERDRLIKAMERAGWVQAKAARILGKTPRQVGYALRRHRIDVKKE

Annotated regions:
phrase: TERDRLIKAMERAGWVQAKAARILGKTPRQVGYALR
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: TNSAVLLRGESGTGKECFARAIHALSIRKSKAFIKLNCAALSETVLESELFGHEKGAFTGALLQRAGRFELANGGTLLLDEIGDVSPQFQAKLLRVLQEGEFERLGGTKTLKVDVRVICATNKNLEVAVLRGEFRADLYYRIN
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: DRLIKAMERAGWVQAKA
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: ARILGKTPRQVGYALRRHRI
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: IVGESPALKRVLATTKIVAATNSAVLLRGESGTGKECFARAIHALSIRKSKAFIKLNCAALSETVLESELFGHEKGAFTGALLQRAGRFELANGGTLLLDEIGDVSPQFQAKLLRVLQEGEFERLGGTKTLKVDVRVICATNKNLEVAVLRGEFRADLYYRINVVP
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: FPGNVRELD
type: CONSERVED_SITE
name: Sigma_54_int_dom_CS
description: Sigma-54 interaction domain, conserved site

phrase: GRFELANGGTLLLDE
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_2
description: Sigma-54 interaction domain, ATP-binding site 2

phrase: IVGESPALKRVLATTKIVAATNSAVLLRGESGTGKECFARAIHALSIRKSKAFIKLNCAALSETVLESELFGHEKGAFTGALLQRAGRFELANGGTLLLDEIGDVSPQFQAKLLRVLQEGEFERLGGTKTLKVDVRVICATNKNLEVAVLRGEFRADLYYRINVVPIILPPLRQRDGDISLLAQVFLEQFNNANDRNCDFGPSAIDILSKCAFPGNVRELDNCVQRTA
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: VLLRGESGTGKEC
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_1
description: Sigma-54 interaction domain, ATP-binding site 1
Protein sequence:
MMGRRNDTNVADFILTGLSDSEEVQMALFMLFLLIYLITMLGNVGMLLIIRLDLQLHTPMYFFLTHLSFIDLSYSTVVTPKTLANLLTSNYISFTGCFAQMFCFVFLGTAECYLLSSMAYDRYAAICSPLHYTVIMPKRLCLALITGPYVIGFMDSFVNVVSMSRLHFCDSNIIHHFFCDTSPILALSCTDTDNTEMLIFIIAGSTLMVSLITISASYVSILSTILKINSTSGKQKAFSTCVSHLLGVTIFYGTMIFTYLKPRKSYSLGRDQVAPVFYTIVIPMLNPLIYSLRNREVKNALIRVMQRRQDSR

Annotated regions:
phrase: GNVGMLLIIRLDLQLHTPMYFFLTHLSFIDLSYSTVVTPKTLANLLTSNYISFTGCFAQMFCFVFLGTAECYLLSSMAYDRYAAICSPLHYTVIMPKRLCLALITGPYVIGFMDSFVNVVSMSRLHFCDSNIIHHFFCDTSPILALSCTDTDNTEMLIFIIAGSTLMVSLITISASYVSILSTILKINSTSGKQKAFSTCVSHLLGVTIFYGTMIFTYLKPRKSYSLGRDQVAPVFYTIVIPMLNPLI
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM
Protein sequence:
MPPAAMAPPPPPQGSSTGDPLYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLYDLPSKLLCRVLNVELKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPVQARPPVRSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSVGMRFRMRFEGEEAPEQRFTGTIIGSENLDPVWPESSWRSLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNPLPLSRVKRPRPNAPPASPESPILTKEAATKVDTDPAQAQRSQNSTVLQGQEQMTLRSNLTESNDSDVTAHKPMMWSPSPNAAKAHPLTFQQRPPMDNWMQLGRRETDFKDVRSGSQSFGDSPGFFMQNFDEAPNRLTSFKNQFQDQGSARHFSDPYYYVSPQPSLTVESSTQMHTDSKELHFWNGQSTVYGNSRDRPQNFRFEQNSSSWLNQSFARPEQPRVIRPHASIAPVELEKTEGSGFKIFGFKVDTTNAPNNHLSSPMAATHEPMLQTPSSLNQLQPVQTDCIPEVSVSTAGTATENEKSGQQAQQSSKDVQSKTQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMFEFDGELVSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKSNAPRKDDSSENEKGHLPMPNKSDN

Annotated regions:
phrase: FCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRA
type: DOMAIN
name: B3_DNA-bd
description: B3 DNA binding domain

phrase: RSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMFEFDGELVSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKMNSKS
type: DOMAIN
name: PB1-like
description: PB1-like domain

phrase: AWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSVGMRFRMRFEGEEAPEQRFTGTIIGSENLDPVWPESSWRSL
type: DOMAIN
name: ARF_dom
description: Auxin response factor domain

phrase: FCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRA
type: DOMAIN
name: B3_DNA-bd
description: B3 DNA binding domain

phrase: GQQAQQSSKDVQSKTQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELKAELDKMFEFDGELVSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEE
type: DOMAIN
name: AUX/IAA_dom
description: AUX/IAA domain

phrase: FCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRR
type: DOMAIN
name: B3_DNA-bd
description: B3 DNA binding domain

phrase: RSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVR
type: DOMAIN
name: B3_DNA-bd
description: B3 DNA binding domain
Protein sequence:
MNRPERLQPGVKLRDADKVSRIPVKIVPSERETMLRKPDWLRVKLPASNQRILEIKQALRSNGLHSVCEEASCPNLAECFNHGTATFMILGAICTRRCPFCDVAHGRPLKPDAEEPVKLAQTIRDMKLKYVVITSVDRDDLRDGGAQHFADCIREIRKLNPEIKIEILVPDFRGRIDAALDILSTEPPDVFNHNLETAPMHYRKARPGANYQWSLDLLKRFKERHPNVPTKSGLMMGLGETNEEIAQVLRDLREHKVEMLTLGQYLQPSKFHLPVERYVSPAEFDELKVLADELGFTHAACGPLVRSSYHADLQAQGKEVK

Annotated regions:
phrase: FNHGTATFMILGAICTRRCPFCDVAHGRPLKPDAEEPVKLAQTIRDMKLKYVVITSVDRDDLRDGGAQHFADCIREIRKLNPEIKIEILVPDFRGRIDAALDILSTEPPDVFNHNLETAPMHYRKARPGANYQWSLDLLKRFKERHPNVPTKSGLMMGLGETNEEIAQVLRDLREHKVEMLTLGQYLQPSKFHLPVERYVSPAEFDELKVLADELGF
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: ERETMLRKPDWLRVKLPASNQRILEIKQALRSNGLHSVCEEASCPNLAECFNHGTATFMILGAICTRRCPFCDVAHGRPLKPDAEEPVKLAQTIRDMKLKYVVITSVDRDDLRDGGAQHFADCIREIRKLNPEIKIEILVPDFRGRIDAALDILSTEPPDVFNHNLETAPMHYRKARPGANYQWSLDLLKRFKERHPNVPTKSGLMMGLGETNEEIAQVLRDLREHKVEMLTLGQYLQPSKFHLPVERYVSPAEFDELKVLADELGFTHAACGPLVRSSYHADLQA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TATFMILGAICTRRCPFCDVAHGRPLKPDAEEPVKLAQTIRDMKLKYVVITSVDRDDLRDGGAQHFADCIREIRKLNPEIKIEILVPDFRGRIDAALDILSTEPPDVFNHNLETAPMHYRKARPGANYQWSLDLLKRFKERHPNVPTKSGLMMGLGETNEEIAQVLRDLREHKVEMLTLGQYLQPSKFHLPVERYVSPAEFDELKVLAD
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: ILGAICTRRCPFCDVAHGRPLKPDAEEPVKLAQTIRDMKLKYVVITSVDRDDLRDGGAQHFADCIREIRKLNPEIKIEILVPDFRGRIDAALDILSTEPPDVFNHNLETAPMHYRKARPGANYQWSLDLLKRFKERHPNVPTKSGLMMGLGETNEEIAQVLRD
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MSYASEVKKELTSLEVHEKNAKAELMALIRMNGAIGINNRQLTLNTQTENPAIARRIYSLLKEFYHLEAELSVRRKMKLKKNNLYIVRLRTGVKELLNDLSILKDDFQINEKVPEGLLTEESELRSYLRGAFLASGSVNNPETSRYHLEIYSLYESHNQMIADWINKYNLNARTTERRSGYIVYLKEAEHIADFLQLIGATNSMLKFEDVRIMRDMRNSVNRLVNCETANLNKVANASMKQINNIQFIDETVGLGELPPKLREVAEARLIHREVSLKELGELVPGGPISKSGINHRLRKINQYAEKLRA

Annotated regions:
phrase: RSYLRGAFLASGSVNNPETSRYHLEIYSLYESHNQMIADWINKYNLNARTTERRSGYIVYLKEAEHIADFLQLIGATNSMLKFEDVRIMRDM
type: DOMAIN
name: WhiA_LAGLIDADG_dom
description: WhiA, LAGLIDADG-like domain

phrase: VNRLVNCETANLNKVANASMKQINNIQFIDETVGLGELPPKLREVAEARLIHREVSLKELGELVPGGPISKSGINHRLRKINQY
type: DOMAIN
name: Sporulation_regulator_WhiA_C
description: Sporulation regulator WhiA, C-terminal

phrase: KNAKAELMALIRMNGAIGINNRQLTLNTQTENPAIARRIYSLLKEFYHLEAELSVRRKMKLKKNNLYIVRLRTGVKELLNDLSI
type: DOMAIN
name: Sporu_reg_WhiA_N_dom
description: Sporulation transcription regulator WhiA, N-terminal domain
Protein sequence:
MSEEQVNIKKKEKWGIAHIYSSFNNTIIHITDITGAETISRWSGGMVVKADRDEPSPYAAMLAARRAAEEALEKGIVGVHIRVRAPGGSKSKTPGPGAQAAIRALARAGLKIGRVEDVTPIPHDGTRPKGGRRGRRV

Annotated regions:
phrase: IRALARAGLKIGRVEDVTPIPH
type: CONSERVED_SITE
name: Ribosomal_uS11_CS
description: Small ribosomal subunit protein uS11, conserved site
Protein sequence:
MKIGIIGAMEEEVTLLRDKIDNRQTITLGGCEIYTGQLNGTEVALLKSGIGKVAAALGATLLLEHSKPDVIINTGSAGGLASTLKVGDIVVSDEARYHDADVTAFGYEYGQLPGCPAGFKADDKLIAAAESCIRELNLNAVRGLIVSGDAFINGSVGLAKIRHNFPDAVAVEMEATAIAHVCYNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQSTLMVETLVQKLAHG

Annotated regions:
phrase: KIGIIGAMEEEVTLLRDKIDNRQTITLGGCEIYTGQLNGTEVALLKSGIGKVAAALGATLLLEHSKPDVIINTGSAGGLASTLKVGDIVVSDEARYHDADVTAFGYEYGQLPGCPAGFKADDKLIAAAESCIRELNLNAVRGLIVSGDAFINGSVGLAKIRHNFPDAVAVEMEATAIAHVCYNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQSTLMVETL
type: DOMAIN
name: Nucleoside_phosphorylase_d
description: Nucleoside phosphorylase domain
Protein sequence:
MSLESIKYTRGSLEILDQLLLPLQTRYIKVRGVEDGWKVINKMQVRGAPAIAIVGCLSLAVELSPDNESSKKNMRQEIEGKLNYLVSARPTAVNIKLAADELINLANTLCADDSISAEIFKERFIGSIEDMLTKDIHDNKAIGSLGCEAILKNIDGDSPVRVLTHCNTGSLATAGYGTALGVIRSLHATKRLEHVFCTETRPYNQGARLTAYELVHEKIPSTLMVDSMVSALMHTRKIHAVIVGADRVAANGDTANKMGTYQIAIVAKYHDVPFYVAAPLTSIDMSLPYGEKIKIEERPDREMTHIGEHRIAAPGINCWNPSFDVTPASLIAGIITEKGVFAPDHLKSVKXHVTGKKYYNIIHI

Annotated regions:
Protein sequence:
MIPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILLLSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQLAGHTRNVA

Annotated regions:
phrase: MTRGDIGNYLGLTVETISRLLGR
type: CONSERVED_SITE
name: Tscrpt_reg_HTH_Crp-type_CS
description: Transcription regulator HTH, Crp-type, conserved site

phrase: IPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSF
type: DOMAIN
name: cNMP-bd_dom
description: Cyclic nucleotide-binding domain

phrase: KNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENN
type: DOMAIN
name: HTH_CRP
description: Crp-type HTH domain

phrase: LTMTRGDIGNYLGLTV
type: DOMAIN
name: HTH_CRP
description: Crp-type HTH domain

phrase: ETISRLLGRFQKSGM
type: DOMAIN
name: HTH_CRP
description: Crp-type HTH domain

phrase: LNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQM
type: DOMAIN
name: cNMP-bd_dom
description: Cyclic nucleotide-binding domain

phrase: IPFTLNEHELDQLDNIIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGE
type: DOMAIN
name: cNMP-bd_dom
description: Cyclic nucleotide-binding domain

phrase: PIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFDAIGSGHHPSFAQALETSMVCEIPFETLDD
type: DOMAIN
name: cNMP-bd_dom
description: Cyclic nucleotide-binding domain

phrase: SPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIE
type: DOMAIN
name: HTH_CRP
description: Crp-type HTH domain

phrase: ERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGMLAVKGKYITIENNDALAQ
type: DOMAIN
name: HTH_CRP
description: Crp-type HTH domain
Protein sequence:
MSTKAVVFAYHDIGCVGLQALLDAGYEIAAVFTHADDPREKTFFGSVAQLCARHGIAVHAPEDPNHPLWVERIGKLAPDFIFSFYYRQLLGDSLLACAKKAALNLHGSLLPRYRGRAPANWVLVNGESETGVTLHQMVKRADAGPIVAQQRVSISATDTALTLHGKLRDAAADLLCETLPLLAAQGQLPATPQDESRATYFGRRTPADGLIDWSLPATQLYNLIRAVTQPYPGAFCPVGDNKLIVWAASVDTSSNGEAPGTVISHEPLRIACGEGSLVITAGQRGDNGLYLSGEQLAREFGLVAGSQMLDKAKRRSVRRTRVLILGVNGFIGNHLSERLLQDDRYEIYGMDIGSDAIERLRAKPNFHFIEGDISIHTEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYNKRVIFPSTSEVYGMCQDANFNEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGQKGLQFTLFRPFNWMGPRLDRLDSARIGSSRAITQLILHLVEGTPIRLVDGGAQKRCFTDVVDGIEALARIIENRDGRCNGQIINIGNPDNEASIRQLGEELLRQFEAHPLRGHFPPFAGFREVESQSFYGKGYQDVSHRTPSIDNAKKLIGWTPGIELSETIGKTLDFFLREAMAEKADQC

Annotated regions:
phrase: RVLILGVNGFIGNHLSERLLQDDRYEIYGMDIGSDAIERLRAKPNFHFIEGDISIHTEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYNKRVIFPSTSEVYGMCQDANFNEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGQKGLQFTLFRPFNWMGPRLDRLDSARIGSSRAITQLILHLVEGTPIRLVDGGAQKRCFTDVVDGIEALARIIENRDGRCNGQIINIGNPDNEASIRQLGEELLRQFEAHPLRGHFPPFAGFREVESQSFYGKGYQDVSHRTPSIDNAKKLIGWTPGIELSETIGKTLDFFL
type: DOMAIN
name: Arna-like_SDR_e
description: Bifunctional polymyxin resistance protein ArnA-like, extended (e) SDRs

phrase: VLILGVNGFIGNHLSERLLQDDRYEIYGMDIGSDAIERLRAKPNFHFIEGDISIHTEWIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIVRYCVKYNKRVIFPSTSEVYGMCQDANFNEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGQKGLQFTLFRPFNWMGPRLDRLDSARIGSSRAITQLILHLVEGTPIRLVDGGAQKRCFTDVVDGIEALARIIENRDGRCNGQIINI
type: DOMAIN
name: Epimerase_deHydtase
description: NAD-dependent epimerase/dehydratase

phrase: EIAAVFTHADDPREKTFFGSVAQLCARHGIAVHAPEDPNHPLWVERIGKLAPDFIFSFYYRQLLGDSLLACAKKAALNLHGSLLPRYRGRAPANWVLVNGESETGVTLHQMVKRADAGPIVAQQRVSISATDTALTLHGKLRDAAADLLCE
type: DOMAIN
name: Formyl_transf_N
description: Formyl transferase, N-terminal

phrase: TPADGLIDWSLPATQLYNLIRAVTQPYPGAFCPVGDNKLIVWAASVDTSSNGEAPGTVISHEPLRIACGEGSLVITAGQR
type: DOMAIN
name: Formyl_trans_C
description: Formyl transferase, C-terminal
Protein sequence:
MNSQDLKKRQEKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRHEVEDVIGLDASEAVLASAKAGIGIEEILEQIVEKVPAPTGDVDAPLQALIFDSVYDAYRGVILQVRIVNGIVKSGDKIQMMSNGKTFDVTEVGIFTPKAVGRDFLATGDVGYVAASIKTVADTRVGDTVTLANNPAKEALHGYKQMNPMVFAGIYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLIMTAPSVVYHVHTTDEDMIEVSNPSEFPDPTRVAFIEEPYVKAQIMVPQEFVGAVMELSQRKRGDFVTMDYIDDNRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDYDMSEYRRSQLVKMDILLNGDKVDALSFIVHKEFAYERGKIIVEKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKAIGSVEVPQEAFLSVLSMDDDAKK

Annotated regions:
phrase: NPMVFAGIYPIESNKYNDLREALEKLQLNDASLQFEPETSQALGFGFRCGFLGLLHMDVIQERLEREFNIDLI
type: DOMAIN
name: EFG_II
description: Elongation Factor G, domain II

phrase: FIEEPYVKAQIMVPQEFVGAVMELSQRKRGDFVTMDYIDDNRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDYDMSEYRRSQLVKMD
type: DOMAIN
name: EFG_V-like
description: Elongation factor EFG, domain V-like

phrase: GVILQVRIVNGIVKSGDKIQMMSNGKTFDVTEVGIFTPKAVGRDFLATGDVGYVAASIKTVADTRVGDTV
type: DOMAIN
name: EFTu-like_2
description: Translation elongation factor EFTu-like, domain 2

phrase: KIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRHEVEDVIGLDASEAVLASAKAGIGIEEIL
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: LNGDKVDALSFIVHKEFAYERGKIIVEKLKKIIPRQQFEVPIQAAIGQKIVARSDIKALRKNVLAKCYGGDVSRKRKLLEKQKAGKKRMKAIGSVEVPQEAFLSV
type: DOMAIN
name: LepA_CTD
description: GTP-binding protein LepA, C-terminal

phrase: DSMDLERERGITIKL
type: CONSERVED_SITE
name: G_TR_CS
description: Tr-type G domain, conserved site

phrase: EKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRHEVEDVIGLDASEAVLASAKAGIGIEEILEQIVEKV
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: EKIRNFSIIAHIDHGKSTLADRILEKTETVSSREMQAQLLDSMDLERERGITIKLNAIELNYTAKDGETYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVRHEVEDVIGLDASEAVLASAKAGIGIEEILEQIVEKVPAP
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: NFSIIAHIDHGKS
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: ERGITIKL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: HLIDTPGHVD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: RSLAACEGAIL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: ILPVINKID
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: EPYVKAQIMVPQEFVGAVMELSQRKRGDFVTMDYIDDNRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDYDMSEYRRS
type: DOMAIN
name: LepA_IV
description: Elongation factor 4, domain IV

phrase: IEEPYVKAQIMVPQEFVGAVMELSQRKRGDFVTMDYIDDNRVNVIYQIPLAEIVFDFFDKLKSSTRGYASFDYDMSEYRRSQLVKM
type: DOMAIN
name: EFG_V-like
description: Elongation factor EFG, domain V-like
Protein sequence:
MAYSFQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILIMIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENWSASMI

Annotated regions:
phrase: PVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFEN
type: DOMAIN
name: CcO_II_C
description: Cytochrome c oxidase subunit 2, C-terminal

phrase: NPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENWSA
type: DOMAIN
name: CcO_II-like_C
description: Cytochrome c oxidase subunit II-like C-terminal

phrase: VLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSF
type: BINDING_SITE
name: Copper_CuA
description: Copper centre Cu(A)

phrase: YSFQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILIMIALPSLR
type: DOMAIN
name: Cyt_c_oxidase_su2_TM_dom
description: Cytochrome C oxidase subunit II, transmembrane domain

phrase: TSPIMEELMNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILIMIALPSLRILYMMDEINNPVLTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENW
type: DOMAIN
name: Cyt_c_oxidase_su2
description: Cytochrome c oxidase, subunit II

phrase: MAYSFQLGLQDATSPIMEELMNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILIMIALPSLRILYMMDEI
type: DOMAIN
name: Cyt_c_oxidase_su2_TM_dom
description: Cytochrome C oxidase subunit II, transmembrane domain

phrase: LTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNDLKPGELRLLEVDNRVVLPMELPIRMLVSSEDVLHSWAVPSLGLKTDAIPGRLNQATVTSNRPGLFYGQCSEICGSNHSFMPIVLEM
type: DOMAIN
name: CcO_II-like_C
description: Cytochrome c oxidase subunit II-like C-terminal
Protein sequence:
MSSDSVVAGNISRADVERVVRAVLTRQLAGATTSSGSVSSAGGPPNPLVVNISARHVHLTEEHVEVLFGKGVKLEPMKWLYQDGYYAAKQTVTIFGPRRRMIPDVRVLGPCRNASQVELAFTDGISLGIDLPVRISGDHHDTVGCVLVGPAGVVELKSGVIRAMRHVHMSPADCAYYGVKNGDEMDLKIHSGPCTTTLEHVTVREDKDVKLEVHIDTDEGNAVDLSHATKVELVKPVGCGCHSK

Annotated regions: