nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MEKAHRFRLPFCSFFPVPLLVSVLIFHHSAPFLIQLFFPSPLFNPLLRPSKISRGSENGACTSHSTLQRTRKIIQWELPKRGGDQDIGDPRPFRIHLSPPSFKVPLFSTDMQNTAPVPTTTTASKMQPFNNSLFGSFDDPILNARAAQVALADIDVKNVPQLTNPLMRPHDMFSYSNYFSGIHDTSAATNIYQGLPSSSEPFDASVVVPTSSDDQMTPLQQVMAMQQSYGAPPPFQYNMTHPFSTTSIASSNNLARYPIAPPTSDMDTDPRQLETFAEHFKQRRIKLGVTQADVGKALAHLKMPGVGSLSQSTICRFESLTLSHNNMVALKPILHSWLEKAEEAMKQKDTIGDINGILPNTDKKRKRTSIAAPEKRELEQFFKQQPRPSGERIASIADRLDLKKNVVRVWFCNQRQKQKRDFRSQFRARSAAAVMGPRVMPVLNGNNSNNNLKQGQTTYNGLPGFFD

Annotated regions:
phrase: DMDTDPRQLETFAEHFKQRRIKLGVTQADVGKALAHLKMPGVGSLSQSTICRFESLTLSHNNMVALKPILHSWLEKA
type: DOMAIN
name: POU_dom
description: POU-specific domain

phrase: PRQLETFAEHFKQRRIKLGVTQADVGKALAHLKMPGVGSLSQSTICRFESLTLSHNNMVALKPILHSWLEKA
type: DOMAIN
name: POU_dom
description: POU-specific domain

phrase: SQSTICRFESLTL
type: DOMAIN
name: POU_dom
description: POU-specific domain

phrase: KRKRTSIAAPEKRELEQFFKQQPRPSGERIASIADRLDLKKNVVRVWFCNQRQKQK
type: DOMAIN
name: HD
description: Homeodomain

phrase: RRIKLGVTQADV
type: DOMAIN
name: POU_dom
description: POU-specific domain

phrase: TDKKRKRTSIAAPEKRELEQFFKQQPRPSGERIASIADRLDLKKNVVRVWFCNQRQKQKR
type: DOMAIN
name: HD
description: Homeodomain

phrase: IADRLDLKKNVVRVWFCNQRQKQ
type: CONSERVED_SITE
name: Homeobox_CS
description: Homeobox, conserved site

phrase: RIKLGVTQADVGKALAH
type: DOMAIN
name: POU
description: POU domain

phrase: SQSTICRFESLTL
type: DOMAIN
name: POU
description: POU domain

phrase: NMVALKPILHSWLEK
type: DOMAIN
name: POU
description: POU domain

phrase: DKKRKRTSIAAPEKRELEQF
type: DOMAIN
name: POU
description: POU domain

phrase: ADRLDLKKNVVRVWF
type: DOMAIN
name: POU
description: POU domain

phrase: DMDTDPRQLETFAEHFKQRRIKLGVTQADVGKALAHLKMPGVGSLSQSTICRFESLTLSHNNMVALKPILHSWLEKA
type: DOMAIN
name: POU_dom
description: POU-specific domain

phrase: KRKRTSIAAPEKRELEQFFKQQPRPSGERIASIADRLDLKKNVVRVWFCNQRQKQK
type: DOMAIN
name: HD
description: Homeodomain

phrase: KKRKRTSIAAPEKRELEQFFKQQPRPSGERIASIADRLDLKKNVVRVWFCNQRQKQKRDFRS
type: DOMAIN
name: HD
description: Homeodomain
Protein sequence:
MRYLTAGESHGPGLTTIIEGLPAGMPLLAEDVNKELKRRQGGHGRGARMRIEKDQVQITAGIRHGKTLGAPVAMFVENKDWKHWETVMSIEPVPEKNEKSRRVSRPRPGHADLVGGMKYGHNDMRNVLERSSARETTVRVAAGAIAKKLLHELGIEVAGHVLEIGGTRANLTRDFSVSEIKETSEASPVRCLDEVAEKEMMQKIDDAKKNGDTIGGIVEVVVGGVPAGLGSYVQWDKKLDAKIARAIVSINAFKGAEFGVGFEAARKPGSEVMDEILWSKEDGYTRRTNNLGGFEGGMTNGMPIVVRGVMKPIPTLYKPLQSVDIDSKETFNASVERSDSCAVPAASVVAEAVVAWEVAVAVLEKFDGDRFDTLKKHVEEHRNLTKEF

Annotated regions:
phrase: RSDSCAVPAASVVAEA
type: CONSERVED_SITE
name: Chorismate_synthase_CS
description: Chorismate synthase, conserved site

phrase: GESHGPGLTTIIEGL
type: CONSERVED_SITE
name: Chorismate_synthase_CS
description: Chorismate synthase, conserved site

phrase: ERSSARETTVRVAAGA
type: CONSERVED_SITE
name: Chorismate_synthase_CS
description: Chorismate synthase, conserved site
Protein sequence:
MASSTGEKGLIVSFGEMLIDFVPTVSGVSLSESPGFLKAPGGAPANVAIAVSRLGGRAAFVGKLGDDDFGHMLAGILRKNGVDDQGINFDEGARTALAFVTLRSDGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLITEPCRSAHMKAMEVAKEAGALLSYDPNLREPLWPSPEEARTQIMSIWDKADIIKVSDVELEFLTENKTMDDKTAMSLWHPNLKLLLVTLGEKGCTYFTKKFHGSVETFHVDAVDTTGAGDSFVGALLQQIVDDQSVLEDEARLRKVLRFANACGAITTTKKGAIPALPTDIEALSFLKDQKKRQTNLKFSKWCCTASPC

Annotated regions:
phrase: LIVSFGEMLIDFVPTVSGVSLSESPGFLKAPGGAPANVAIAVSRLGGRAAFVGKLGDDDFGHMLAGILRKNGVDDQGINFDEGARTALAFVTLRSDGEREFMFYRNPSADMLLRPDELNLELIRSAKVFHYGSISLITEPCRSAHMKAMEVAKEAGALLSYDPNLREPLWPSPEEARTQIMSIWDKADIIKVSDVELEFLTENKTMDDKTAMSLWHPNLKLLLVTLGEKGCTYFTKKFHGSVETFHVDAVDTTGAGDSFVGALLQQIVDDQSVLEDEARLRKVLRFANACGAITTTKKGAIPALP
type: DOMAIN
name: PfkB_dom
description: Carbohydrate kinase PfkB

phrase: DTTGAGDSFVGAL
type: CONSERVED_SITE
name: Carboh/pur_kinase_PfkB_CS
description: Carbohydrate/purine kinase, PfkB, conserved site

phrase: GGAPANVAIAVSRLGGRAAFVGKL
type: CONSERVED_SITE
name: Carboh/pur_kinase_PfkB_CS
description: Carbohydrate/purine kinase, PfkB, conserved site
Protein sequence:
MTNEEPKRTLVISTIENGTVIDHIKAGEALTVLRILGITGSTRECVSVATNVSSKAQEKKDVVKIEKRELKAQEVDRIALVAPNATINIIRNFRVIEKKGVIIPPVLIGVLRCPNPCCITNTNEPVMSRFEMHGKKAVCSYCDAVISSDISSHII

Annotated regions:
phrase: IGVLRCPNPCCITNTNEPVMSRFEMHGKKAVCSYCDAVISS
type: DOMAIN
name: Asp_carbamoyltrfase_reg_C
description: Aspartate carbamoyltransferase regulatory subunit, C-terminal

phrase: VISTIENGTVIDHIKAGEALTVLRILGITGSTRECVSVATNVSSKAQEKKDVVKIEKRELKAQEVDRIALVAPNATINIIRNFRVIEKKG
type: DOMAIN
name: Asp_carbamoyltransf_reg_N
description: Aspartate carbamoyltransferase regulatory subunit, N-terminal
Protein sequence:
MKATERRNIRHLSQPELDEYFLAIGEKKFRSKQVYEWLWQKHAHGFDDMSNISKELRAKLAEEFSFPALKIDATQFSEDGTVKSRFKTFDNHLVEGVLIPTEQRKTACVSSQIGCSLSCKFCATGYMERKRNLTYDEIYDEVVLINQQSEKAYDKKLTNLVFMGMGEPLLNYANVLKAIERITAEDGLFMSPKRITVSTAGVAKQIIKLGDDKVKFKLALSLHAANDHKRNEIMPINEANNIKSLVDALNYFYKQTKTEITFEYILFQNFNDTEKDAAELVKLYRQVPVDLINIIEYNPIDAFAFSKPTEEVTAQFMGYLEKNRVNARLRRSRGKDIDAACGQLANKN

Annotated regions:
phrase: TEQRKTACVSSQIGCSLSCKFCATGYMERKRNLTYDEIYDEVVLINQQSEKAYDKKLTNLVFMGMGEPLLNYANVLKAIERITAEDGLFMSPKRITVSTAGVAKQIIKLGDDKVKFKLALSLHAANDHKRNEIMPINEANNIKSLVDALNYFYKQTKTEITFEYILFQNFNDTEKDAAELVKLYRQVPVDLINIIEYNPIDAFAFSKPTEEVTAQFMGYLEKNRVNARLRRSRGK
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: NIRHLSQPELDEYFLAIGEKKFRSKQVYEWLWQKHAHGFDDMSNISKELRAKLAEE
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: SQIGCSLSCKFCATGYMERKRNLTYDEIYDEVVLINQQSEKAYDKKLTNLVFMGMGEPLLNYANVLKAIERITAEDGLFMSPKRITVSTAGVAKQIIKLGDDKVKFKLALSLHAANDHKRNEIMPINEANNIKSLVDALNYFYKQTKTEITFEYILFQNFNDTEKDAAE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: KTACVSSQIGCSLSCKFCATGYMERKRNLTYDEIYDEVVLINQQSEKAYDKKLTNLVFMGMGEPLLNYANVLKAIERITAEDGLFMSPKRITVSTAGVAKQIIKLGDDKVKFKLALSLHAANDHKRNEIMPINEANNIKSLVDALNYFYKQTKTEITFEYILFQNFNDTEKDAAELVKLYRQVPVDLINIIEYNPIDAFAFSKPTEEVTAQFMG
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain
Protein sequence:
MAKAPNTAAQRVRKKVRKNVSDGVAHVHASFNNTIITITDRQGNALAWASSGGQGFKGSRKSTPFAAQVAAEVAGRAAQDQGIKNLEVEIKGPGPGRESSVRALAALGIRIVSISDVTPVPHNGCRPQKRRRI

Annotated regions:
phrase: VRALAALGIRIVSISDVTPVPH
type: CONSERVED_SITE
name: Ribosomal_uS11_CS
description: Small ribosomal subunit protein uS11, conserved site
Protein sequence:
MIVLGRIVAPFGVKGWVKVHPFGDDPLSWGEMPQWWLADDADAPESAWQPVTLAGFKEHGAGLVAAFVGHDDRNAAEALQGRFIGAPREALPKPDVDEYYWGDLIGLAVVNQADEALGTVEALMSTGAHDVLQVRDGDDERLIPFVAAYVLDVDLAARTIRVDWQKDW

Annotated regions:
phrase: WGDLIGLAVVNQADEALGTVEALMSTGAHDVLQVRDGDDERLIPFVAAYVLDVDLAARTIRVDWQKD
type: DOMAIN
name: PRC_RimM
description: Ribosome maturation factor RimM, PRC barrel domain

phrase: LGRIVAPFGVKGWVKVHPFGDDPLSWGEMPQWWLADDADAPESAWQPVTLAGFKEHGAGLVAAFVGHDDRNAAEALQGRFIGAPR
type: DOMAIN
name: RimM_N
description: RimM, N-terminal
Protein sequence:
MSTDPTSKPAFPITDEIRHALAVTKRGVDELLIEEEFAQKLARSAATGKPLRIKLGLDPTAPDIHLGHTVVLNKMRQLQDLGHTVIFLIGDFTSLIGDPSGRNATRPPLTREQIESNAKTYFEQAALVLDREKTEIRYNSEWSMPLGADGMIKLASRYTVARMLEREDFTKRFQGGIPISIHEFLYPLMQGYDSVALNADLELGGTDQKFNLLVGRELQKQYGQEQQCILTMPLLEGLDGVEKMSKSKGNYVGIGEKPNDMFGKLMSISDVLMWRYFELLSFRSLDEIARLRGEAEGGRNPRDFKVMLAQEIVARFHSQADAERALEDFNHRAKGGVPDDIPTVTLAGAPLAIGQLLKQAGLVPSTSEALRNIEQGGVKIDGATVSDKALKVDAGEFVVQVGKRRFARVTLTA

Annotated regions:
phrase: LLKQAGLVPSTSEALRNIEQGGVKIDGATVSDKALKVDAGEF
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: PTAPDIHLGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: LAIGQLLKQAGLVPSTSEALRNIEQGGVKIDGATVSDKALKVDAGEFVVQVGKRRFARVTL
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain
Protein sequence:
MSNESSKKQSSKKALFDPVSFSKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASSKQISPEARYKGMLDCLVRIPREQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKELFMSGVNKEKQFWRWFLANLASGGAAGATSLCVVYPLDFARTRLGVDIGKGPEQRQFTGLGDCIMKIAKSDGLIGLYQGFGVSVQGIIVYRASYFGAYDTVKGLLPKPKETPFLVSFIIAQIVTTCSGILSYPFDTVRRRMMMQSGESDRQYKGTIDCFLKIYRHEGVPAFFRGAFSNILRGTGGALVLVLYDKIKEFLNIDVGGSSSGD

Annotated regions:
phrase: ETPFLVSFIIAQIVTTCSGILSYPFDTVRRRMMMQSGESDRQYKGTIDCFLKIYRHEGVPAFFRGAFSNILRGTGGALVLVLYDKIKEFL
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier

phrase: VSFSKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASSKQISPEARYKGMLDCLVRIPREQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKELFM
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier

phrase: RWFLANLASGGAAGATSLCVVYPLDFARTRLGVDIGKGPEQRQFTGLGDCIMKIAKSDGLIGLYQGFGVSVQGIIVYRASYFGAYDTVKGLLP
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier

phrase: TPFLVSFIIAQIVTTCSGILSYPFDTVRRRMMMQSGESDRQYKGTIDCFLKIYRHEGVPAFFRGAFSNILRGTGGALVLVLYDKIKE
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier

phrase: VSFSKDLLAGGVAAAVSKTAVAPIERVKLLLQVQASSKQISPEARYKGMLDCLVRIPREQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKE
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier

phrase: RWFLANLASGGAAGATSLCVVYPLDFARTRLGVDIGKGPEQRQFTGLGDCIMKIAKSDGLIGLYQGFGVSVQGIIVYRASYFGAYDTVKG
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier
Protein sequence:
MSVHIEAKQGEIAETILLPGDPLRAKYIAETFLEDVVLFNQVRGMLGFTGTYKGEKVSVMGTGMGIPSISIYVNELIQSYDVKNLIRVGTMGGIQADVKVRDVVIAQAASTDSQINRNTFAGVDFAPVADFSLLKKAYDAGVEKGLSLKVGNVFSADRFYNDQLDKQQLADYGVLGIEMEAAALYTLAQKYGRRALAILTVSDHIFTGEETSAEERQTTFNDMIVVALEAAIK

Annotated regions:
phrase: ILLPGDPLRAKYIAETFLEDVVLFNQVRGMLGFTGTYKGEKVSVMGTGMGIPSISIYVNELIQSYDVKNLIRVGTMGGIQADVKVRDVVIAQAASTDSQINRNTFAGVDFAPVADFSLLKKAYDAGVEKGLSLKVGNVFSADRFYNDQLDKQQLADYGVLGIEMEAAALYTLAQKYGRRALAILTVSDHIFTGEETSAEERQTTF
type: DOMAIN
name: Nucleoside_phosphorylase_d
description: Nucleoside phosphorylase domain

phrase: GTGMGIPSISIYVNE
type: CONSERVED_SITE
name: Nucleoside_phosphorylase_CS
description: Nucleoside phosphorylase, conserved site
Protein sequence:
MTTYQTLFLIPLAISTLVTAWLPETDKTITSRNGTNLFASSKGKIRGVNMGSQFVFEPWIAEKAWSSMGCKGQKSEFDCVVSLGQDAANKAFAQHWGSWITQDDITEIQSYTLNTIRVPIGYWMKEDLVNKTSEHFPQGGFAYLEKLCGWASDAGLYIILDLHGAPGAQTPHNPFTGQYASTAGFYNDYQFGRALEFLEWITTKVHQSDSFRNVGMLEIVNEPLQNAQKVGSMRSTYYPDAFKRIRAAEQKLNVSKSGYLHIQMMDKLWGSGDPEEYLTDKYYVAYDDHRYLKWDPKVNVSKENYISTSCSDELDSNTPTIVGEWSLSVPDDVASTPDWDMDTNKDFYKKWFAAQITAYEKQRGWVFWTWKTQLGGYRWSYKDAVAAGVVPEDIDSALNMGVCN

Annotated regions:
phrase: DAANKAFAQHWGSWITQDDITEIQSYTLNTIRVPIGYWMKEDLVNKTSEHFPQGGFAYLEKLCGWASDAGLYIILDLHGAPGAQTPHNPFTGQYASTAGFYNDYQFGRALEFLEWITTKVHQSDSFRNVGMLEIVNEPLQNAQKVGSMRSTYYPDAFKRIRAAEQKLNVSKSGYLHIQMMDKLWGSGDPEEYLTDKYYVAYDDHRYLKWDPKVNVSKENYISTSCSDELDSNTPTIVGEWSLSVPDDVASTPDWDMDTNKDFYKKWFAAQITAYEKQRGWVFWTW
type: DOMAIN
name: Glyco_hydro_5
description: Glycoside hydrolase, family 5
Protein sequence:
MSRIGKQPIPVPSGVEVKLGADVVEVKGPKGSLTTPVSPLLKYEIQDGSVVITRVEETKKASAQHGLRRTLLANCIEGVSKGFSKVLEVNGVGYKVAVKGNNIELALGFSHPVVIELPKGIEAAAAGNKLTISGFDKQLVGEVAANIRRVRPPEPYKGKGVKYEHEQIRRKAGKSGGKK

Annotated regions:
phrase: PEPYKGKG
type: CONSERVED_SITE
name: Ribosomal_uL6_CS
description: Large ribosomal subunit protein uL6, conserved site

phrase: GVGYKVAVKGNNIELALGFSHPVVIELPKGIEAAAAGNKLTISGFDKQLVGEVAANIRRVRPPEPYKGKGVK
type: DOMAIN
name: Ribosomal_uL6_a/b-dom
description: Large ribosomal subunit protein uL6, alpha-beta domain

phrase: VPSGVEVKLGADVVEVKGPKGSLTTPVSPLLKYEIQDGSVVITRVEETKKASAQHGLRRTLLANCIEGVSK
type: DOMAIN
name: Ribosomal_uL6_a/b-dom
description: Large ribosomal subunit protein uL6, alpha-beta domain
Protein sequence:
MTRIGTPLSPTATRVLLCGCGELGKEVVIELQRLGVEVIAVDRYANAPAMQVAHRSHVVNMLDGVALRAVIEAEKPHYIVPEIEAIATATLVELENEGFNVVPTARATQLTMNREGIRRLAAEELDLPTSPYHFADTFEDYAKAVADVGYPCVVKPVMSSSGKGQSLLRSDADLQKSWDYAQEGGRAGKGRVIVEGFIDFEYEITLLTVRHVGGTTFLEPVGHRQEKGDYQESWQPQAMSPKALAESQRVAKAVTDALGGRGLFGVELFVKGDQVWFSEVSPRPHDTGLVTLISQDLSQFALHARAILGLPIPVVRQFGPSASAVILPEGQSQQTSFANLGAALSEPDTAIRLFGKPEINGTRRMGVCLARDESVELARAKATRASQAVKVEF

Annotated regions:
phrase: RLAAEELDLPTSPYHFADTFEDYAKAVADVGYPCVVKPVMSSSGKGQSLLRSDADLQKSWDYAQEGGRAGKGRVIVEGFIDFEYEITLLTVRHVGGTTFLEPVGHRQEKGDYQESWQPQAMSPKALAESQRVAKAVTDALGGRGLFGVELFVKGDQVWFSEVSPRPHDTGLVTLISQDLSQFALHARAI
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold

phrase: LCGCGELGKEVVIELQRLGVEVIAVDRYANAPAMQVAHRSHVVNMLDGVALRAVIEAEKPHYIVPEIEAIATATLVELENEGFNVVPTARAT
type: DOMAIN
name: PurT/PurK_preATP-grasp
description: PurT/PurK-like, preATP-grasp domain

phrase: SASAVILPEGQSQQTSFANLGAALSEPDTAIRLFGKPEINGTRRMGVCLARDESVELARAKATRASQA
type: DOMAIN
name: PurT_C
description: PurT, C-terminal

phrase: AAEELDLPTSPYHFADTFEDYAKAVADVGYPCVVKPVMSSSGKGQSLLRSDADLQKSWDYAQEGGRAGKGRVIVEGFIDFEYEITLLTVRHVGGTTFLEPVGHRQEKGDYQESWQPQAMSPKALAESQRVAKAVTDALGGRGLFGVELFVKGDQVWFSEVSPRPHDTGLVTLISQDLSQ
type: DOMAIN
name: ATP-grasp_carboxylate-amine
description: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type
Protein sequence:
MAAPRAFLHLGAREWHGRARGTHSMSGLATPDSNREKKRTLLQFLSDHFHDVQTLREYLLQKQISKVSMENRSYRKIQERYGPYITGAQFILKQGGAVKFQGRDWIRPNDRGHSIAELQKVPVEAVDASGCAINYQGLSNLLPLKELQFLSLQRCPNLDDWCLSRLYLLAGSLQELSLAGCPRISERGLACLHHLQNLRRLDISDLPAVSHPGLTQILVEEMLPHCEVLGVDWAKSLKLGPDDQPPDTSSPLSS

Annotated regions:
Protein sequence:
MSFSVEVLAGIAIELQRGIGHQDRFQRLITTLRQVLACDASALLRYESRQFIPLAIDGLAQDVLGRRFTLEGHPRLEAIARAGDVVRFPADSDLPDPYDGLIPGQESLKVHACVGLPLFAGQNLIGALTLDAMTPEQFEVFSDEELRLVAALAAGALSNALLIEQLESQNMLPGSSGVFEPIKETHMIGLSPAMTQLKKEIEIVAGSDLNVLIGGETGTGKELVAKAIHQGSPRAVNPLVYLNCAALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRSLRVDVRVLAATNRDLREEVLTGRFRADLFHRLSVFPLFVPPLRERGDDVVLLAGYFCEQCRLRLGLSRVVLSPDARRHLLNYGWPGNVRELEHAIHRAVVLARATRAGDEVILEAQHFALPEDVLPAPPAESFLALPTCRNLRESTENFQREMIRQALAQNNHNWAASARALETDVANLHRLAKRLGLKD

Annotated regions:
phrase: WPGNVRELE
type: CONSERVED_SITE
name: Sigma_54_int_dom_CS
description: Sigma-54 interaction domain, conserved site

phrase: GKFEMADNGTLFLDE
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_2
description: Sigma-54 interaction domain, ATP-binding site 2

phrase: VLIGGETGTGKEL
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_1
description: Sigma-54 interaction domain, ATP-binding site 1

phrase: SDLNVLIGGETGTGKELVAKAIHQGSPRAVNPLVYLNCAALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRSLRVDVRVLAATNRDLREEVLTGRFRADLFHRLS
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: GHQDRFQRLITTLRQVLACDASALLRYESRQFIPLAIDGLAQDVLGRRFTLEGHPRLEAIARAGDVVRFPADSDLPDPYDGLIPGQESLKVHACVGLPLFAGQNLIGALTLDAMTPEQFEVFSDEELRLVAALAAGALSNALLIEQL
type: DOMAIN
name: GAF
description: GAF domain

phrase: QDRFQRLITTLRQVLACDASALLRYESRQFIPLAIDGLAQDVLGRRFTLEGHPRLEAIARAGDVVRFPADSDLPDPYDGLIPGQESLKVHACVGLPLFAGQNLIGALTLDAMTPEQFEVFSDEELRLVAALA
type: DOMAIN
name: GAF
description: GAF domain

phrase: MIGLSPAMTQLKKEIEIVAGSDLNVLIGGETGTGKELVAKAIHQGSPRAVNPLVYLNCAALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRSLRVDVRVLAATNRDLREEVLTGRFRADLFHRLSVFPLFVPPLRERGDDVVLLAGYFCEQCRLRLGLSRVVLSPDARRHLLNYGWPGNVRELEHAIHRAV
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: MIGLSPAMTQLKKEIEIVAGSDLNVLIGGETGTGKELVAKAIHQGSPRAVNPLVYLNCAALPESVAESELFGHVKGAFTGAISNRSGKFEMADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRSLRVDVRVLAATNRDLREEVLTGRFRADLFHRLSVFP
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain
Protein sequence:
MADNRIAGSLPTSSKWSFLPKSVSSHFKPSSNPRSSNPDIENAPPQNPNIHNPRNQSVSSKSTAYKNQMDSPNCRSQVSASRPRAISALKTRNEVEEEGASNPHVKVVVRIKPTKEYCWKVKKVSKVSYSVRDRHFTFDSVLDSNLNQDDVFQQIGVPLVRDALSGYNTSVLSYGQNGSGKTYTMWGPAGSMLEDPSPKGEQGLAPRIFQMLFSEIQREKIKSGGKEVNYQCRCSFLEIYNGQISDLIDQTQRNLKIKDDAKNGIYVENLTEEYVDSYEDVAQILMKGLSSRKVGATSTSFQSSRSHVILSFIVESWNKGASSRCFNTTRTSRINLVDLAGAGTNERDATKHCVEEEKFLKKSLSELGHVVNSLAENVHPGISDRSLHKTSCLTHLLQESLGGNSKLTILCNIFPSDKDTKRTMSTLRFGERAKAMGNKPMINEISEEDVNDLSDQIRLLKEELSKVKADACHSVGSKNDYFGAKNARESLNQLRVSLNRSLMLPKIDNDEEEITVDEDDFKELHLQIKSLRGSFNQKLKKFPVNRDSVNSSFVTAFGESELMDDDEICSEEVEVEENDFGESLEEHDSAATVCKSSEKSRIEEFVSENSISISPCRQSLILQEPIQSESPKFRDSLRKSIALSSSCLRNQNSLAKSIKSTCFAESQHIRSSLRGSKIFTGSTESLAASLRRGLDIIDNPMNPASNRCSVSLSSDNLTMQPPTDDRLPLSPLCPTCRICSSKLPSVVEGDGYHMEGVLEKQQELEKLCSEQAAKIEQLTRLVGQHKLQTEDETEKLMGASNGERLPSANENQLLSCITETYDVKQISDDDSKKTDFDIGEKEALLKEIEDLKKKLQTPVTMSTNELRSSLLARSFQLRSKNAEKDIEEERLRCTEMESEWISLTDEFRVEIETQRTRAEKAEAQLKQEKLSSEELEDALRRAVLGHARFVEHYTELQEKYNDLCSKHKATVEWITELKKAVAKAGKKGCGSRFAKSLASELSALRVERERERDLLKKENISLKIQLRNTAEAVHTAGEVLVRLREAEQSASAAEEKFNEVEEENEKLKKKMEKLKRRHKLEVVTIKKSLKQNTLPESALQPLHQRNSAIEEEGM

Annotated regions:
phrase: NPHVKVVVRIKPTKEYCWKVKKVSKVSYSVRDRHFTFDSVLDSNLNQDDVFQQIGVPLVRDALSGYNTSVLSYGQNGSGKTYTMWGPAGSMLEDPSPKGEQGLAPRIFQMLFSEIQREKIKSGGKEVNYQCRCSFLEIYNGQISDLIDQTQRNLKIKDDAKNGIYVENLTEEYVDSYEDVAQILMKGLSSRKVGATSTSFQSSRSHVILSFIVESWNKGASSRCFNTTRTSRINLVDLAGAGTNERDATKHCVEEEKFLKKSLSELGHVVNSLAENVHPGISDRSLHKTSCLTHLLQESLGGNSKLTILCNIFPSDKDTKRTMSTLRFGERAKAMGNKPMIN
type: DOMAIN
name: Kinesin_motor_dom
description: Kinesin motor domain

phrase: GYNTSVLSYGQNGSGKTYTMW
type: DOMAIN
name: Kinesin_motor_dom
description: Kinesin motor domain

phrase: TSTSFQSSRSHVILSFI
type: DOMAIN
name: Kinesin_motor_dom
description: Kinesin motor domain

phrase: RINLVDLAGAGTNERDAT
type: DOMAIN
name: Kinesin_motor_dom
description: Kinesin motor domain

phrase: SLHKTSCLTHLLQESLGGNSK
type: DOMAIN
name: Kinesin_motor_dom
description: Kinesin motor domain

phrase: KVKKVSKVSYSVRDRHFTFDSVLDSNLNQDDVFQQIGVPLVRDALSGYNTSVLSYGQNGSGKTYTMWGPAGSMLEDPSPKGEQGLAPRIFQMLFSEIQREKIKSGGKEVNYQCRCSFLEIYNGQISDLIDQTQRNLKIKDDAKNGIYVENLTEEYVDSYEDVAQILMKGLSSRKVGATSTSFQSSRSHVILSFIVESWNKGASSRCFNTTRTSRINLVDLAGAGTNERDATKHCVEEEKFLKKSLSELGHVVNSLAENVHPGISDRSLHKTSCLTHLLQESLGGNSKLTILCNIFPSDKDTKRTMSTLRFGERAK
type: DOMAIN
name: Kinesin_motor_dom
description: Kinesin motor domain

phrase: HVKVVVRIKPTKEYCWKVKKVSKVSYSVRDRHFTFDSVLDSNLNQDDVFQQIGVPLVRDALSGYNTSVLSYGQNGSGKTYTMWGPAGSMLEDPSPKGEQGLAPRIFQMLFSEIQREKIKSGGKEVNYQCRCSFLEIYNGQISDLIDQTQRNLKIKDDAKNGIYVENLTEEYVDSYEDVAQILMKGLSSRKVGATSTSFQSSRSHVILSFIVESWNKGASSRCFNTTRTSRINLVDLAGAGTNERDATKHCVEEEKFLKKSLSELGHVVNSLAENVHPGISDRSLHKTSCLTHLLQESLGGNSKLTILCNIFPSDKDTKRTMSTLRFGERAKA
type: DOMAIN
name: Kinesin_motor_dom
description: Kinesin motor domain
Protein sequence:
MEESDTTKYVIHAHISAEGVVERPDVVGAVFGQTEGLLGADLDLRELQKTGRIGRIEVNITSKYGKSNGNILIPSSLDKVETSILAAALETIDRVGPCISKITVTKIEDVRSSKRKQIIDRAKHILTDMFDNSVPESQEITDAVKAAVRVEEVTFIDNLPAGPNVLDSDAILVVEGRADVLNLLKYGIKNAIAVEGTNVPQLVAELSKKKTVTVFTDGDRGGELILKELLQVADVDYVARAPDGKGVEELTQKEVVKSLRSKVPVEQVIEVPQGRRRNKLAAQAAEKQAQAEAAQKAEAPAAAAPVQPQREYQQKEYPQRESRERSEQPRGEVPRRKSLRRTEEQQERPERPERSERAERREYRERREYREPREPREQREQAPARKEREPSEFDEMMKELSGTLSARLLDANKNVINTVAVRDLANTLKESNGDVKSVVFDGVITQRMLDIAAEKNLETLVGVKMGSVVKQPAGVKVITTE

Annotated regions:
phrase: AILVVEGRADVLNLLKYGIKNAIAVEGTNVPQLVAELSKKKTVTVFTDGDRGGELILKELL
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: DAILVVEGRADVLNLLKYGIKNAIAVEGTNVPQLVAELSKKKTVTVFTDGDRGGELILKELLQVADVDYVARAP
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: DAILVVEGRADVLNLLKYGIKNAIAVEGTNVPQLVAELSKKKTVTVFTDGDRGGELILKELLQVADVDYVARA
type: DOMAIN
name: TOPRIM_DnaG/twinkle
description: Archaeal primase DnaG/twinkle-like, TOPRIM domain

phrase: DAILVVEGRADVLNLLKYGIKNAIAVEGTNVPQLVAELSKKKTVTVFTDGDRGGELILKELLQVADVDY
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain
Protein sequence:
MEQGMKVTLPDFQNAAVLVVGDVMLDRYWHGPTSRISPEAPVPVVKVTEIGERPGGAANVAMNIASLGANSRLVGLTGIDDAARALTERLNDVKVRCDFVGLPTHPTITKLRVLSRSQQLIRLDFEEGFSDVDPQPMLERIAQALPHIGALVLSDYAKGALAHVEEMIALARKSGVPILIDPKGTDFARYRGATLLTPNMSEFEAVAGKCTDNADIEEKGLKVIRDFDLQALLVTRSEQGMSLLRPGQPALHLPTQAQEVFDVTGAGDTVIGVLATSLAAGKTLDESCALANAAAGVVVGKLGTSTVSPVELENAVRGRSDNGFGVMTEAELHQAVADARQRGEKVVMTNGCFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGESRPVNPLDQRMIVLGALGAVDWVVPFEEDTPQRLIASVLPDVLVKGGDYRPEEIAGSEEVWAAGGEVKVLNFEDGISTTNIINTINKSK

Annotated regions:
phrase: VLVVGDVMLDRYWHGPTSRISPEAPVPVVKVTEIGERPGGAANVAMNIASLGANSRLVGLTGIDDAARALTERLNDVKVRCDFVGLPTHPTITKLRVLSRSQQLIRLDFEEGFSDVDPQPMLERIAQALPHIGALVLSDYAKGALAHVEEMIALARKSGVPILIDPKGTDFARYRGATLLTPNMSEFEAVAGKCTDNADIEEKGLKVIRDFDLQALLVTRSEQGMSLLRPGQPALHLPTQAQEVFDVTGAGDTVIGVLATSLAAGKTLDESCALANAAAGVVVGKLGTSTVSPVEL
type: DOMAIN
name: RfaE_dom_I
description: RfaE bifunctional protein, domain I

phrase: VVMTNGCFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGESRPVNPLDQRMIVLGALGAVD
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: MTNGCFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGESRPVNPLDQRMIVLGALGAVDWVVPFEEDTPQRLIASVLPDVLVKGGDYRPEEIAGSEEVWAAGGEVKVLNFEDGISTTNII
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: VLVVGDVMLDRYWHGPTSRISPEAPVPVVKVTEIGERPGGAANVAMNIASLGANSRLVGLTGIDDAARALTERLNDVKVRCDFVGLPTHPTITKLRVLSRSQQLIRLDFEEGFSDVDPQPMLERIAQALPHIGALVLSDYAKGALAHVEEMIALARKSGVPILIDPKGTDFARYRGATLLTPNMSEFEAVAGKCTDNADIEEKGLKVIRDFDLQALLVTRSEQGMSLLRPGQPALHLPTQAQEVFDVTGAGDTVIGVLATSLAAGKTLDESCALANAAAGVVVGKLGTSTVS
type: DOMAIN
name: PfkB_dom
description: Carbohydrate kinase PfkB

phrase: LPDFQNAAVLVVGDVMLDRYWHGPTSRISPEAPVPVVKVTEIGERPGGAANVAMNIASLGANSRLVGLTGIDDAARALTERLNDVKVRCDFVGLPTHPTITKLRVLSRSQQLIRLDFEEGFSDVDPQPMLERIAQALPHIGALVLSDYAKGALAHVEEMIALARKSGVPILIDPKGTDFARYRGATLLTPNMSEFEAVAGKCTDNADIEEKGLKVIRDFDLQALLVTRSEQGMSLLRPGQPALHLPTQAQEVFDVTGAGDTVIGVLATSLAAGKTLDESCALANAAAGVVVGKLGTSTVSPVELENA
type: DOMAIN
name: RfaE_dom_I
description: RfaE bifunctional protein, domain I

phrase: GGAANVAMNIASLGANSRLVGLT
type: CONSERVED_SITE
name: Carboh/pur_kinase_PfkB_CS
description: Carbohydrate/purine kinase, PfkB, conserved site

phrase: VADARQRGEKVVMTNGCFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGESRPVNPLDQRMIVLGALGAVDWVVPFEEDTPQRLIASVLPDVLVKGGDYRPEEIAGSEEVWAAGGEVKVLNFEDGISTTNIINTIN
type: DOMAIN
name: RfaE_dom_II
description: RfaE bifunctional protein, domain II
Protein sequence:
MKKNQFANKLIVIDLLSVQRESFYSFLTEGLAKELNNFSPIIDYTGKLELHLVTNQLVIKKPKFSFEEAKRRDCSYTISINIVTQLFNKNSGDVKEQEILLGEIPLMTQKGTFVINGAERVIVNQIVRSPGIYFNSEMDKNNLKTFNFLIIPNRGAWLKCEIDKNDLIWIRIDKNKKINLSIFFKALGIDHDDLRIKNAFRQPEFIYKNLNKDENYTQQEALEELHKKLFPGEPATSEASTKILYFKFFNPKKYDLGIVGRKKINKKLDLNSPENIRILTIQDILSGINYLINLKFGFGNIDDIDHLANRRLKSVGELLQSQISIGLIRLERLIKERMTICEQSSLVPSALINPKPIFAAIKEFFNSSQLSQFMDQVNPLAELTHKRRVSSLGPGGLSKERAGFAVRDIHPSHYGRICPIETPEGPNAGLIGSLAIYARINPDGFIEAPFYKVNQGQVLKNKGIIYLDAEQEDEFKIAPGDIRINETNFIKEINVPVRYRQEFTQCPAEEIDFIAVSPIQVISAATSLIPFLEHNDANRALMGSNMQRQAVPLIFPERPLVGTGLEAQIAKDSGIMAISRSNGIVKFTSAEKIIVTDSSNNQITYNLQKYQKSNQETCINHRPIVWPGERIKKGQILADGSATDTGELALGRDVLVAYMPWEGYNYEDAFLISDRLVYEDLYTSIHIEKYEIEARQTKLGPEEITRNIPNVGENSLKQLDENGIVVVSSFVESGSILVGKVTPKGESDQPPESKLLQAIFGEKNKDVKDTSLRLPNGTRGRVVDVRIFSREKGDELAVGINYIVRIYVAQKRKIQIGDKMAGRHGNKGIISKILPRQDMPYLPNGTPVDIILNPLGVPSRMNVGQIFECILGISAFNLKKRFRILPFDEMYESDSSRILINQKLKEAQTLTNLDYLFNENHLGKVALFDGRSGEKFDNPVLVGKIYMMKLVHLVDDKIHSRSTGPYSLVTQQPLGGKAQQGGQRLGEMEVWAFEAFGAAYALQELLTIKSDDIQGRNEALTAIVRGKTIPKPGTPESLKVLMREIQSLGLDIAAYRLPNLHHGEIKSIEIDLTHNKIVQKR

Annotated regions:
phrase: RSPGIYFNSEMDKNNLKTFNFLIIPNRGAWLKCEIDKNDLIWIRIDKNKKINLSIFFKALGIDHDDLRIKNAFRQPEFIYKNLNKDENYTQQEALEELHKKLFPGEPATSEASTKILYFKFFNPKKYDLGIVGRKKINKKLDLNSPENIRILTIQDILSGINYLINLKFGFGNIDDIDHLANRRL
type: DOMAIN
name: RNA_pol_Rpb2_2
description: RNA polymerase Rpb2, domain 2

phrase: GGQRLGEMEVWAFEAFGAAYALQELLTIKSDDIQGRNEALTAIVRGKTIPKPGTPESLKVLMREIQSLGLDIA
type: DOMAIN
name: RNA_pol_Rpb2_7
description: RNA polymerase Rpb2, domain 7

phrase: GDKMAGRHGNKG
type: CONSERVED_SITE
name: RNA_pol_bsu_CS
description: RNA polymerase, beta subunit, conserved site

phrase: YKVNQGQVLKNKGIIYLDAEQEDEFKIAPGDIRINETNFIKEINVPVRYRQEFTQCPAEEIDFIAV
type: DOMAIN
name: DNA-dir_RNA_pol_bsu_external_1
description: DNA-directed RNA polymerase, beta subunit, external 1 domain

phrase: SRSNGIVKFTSAEKIIVTDSSNNQITYNLQKYQKSNQETCINHRPIVWPGERIKKGQILADGSATDTGELALGRDVLVAYMPWEGYNYEDAFLISDRLVYEDLYTSIHIEKYEIEARQTKLGPEEITRNIPNVGENSLKQLDENGIVVVSSFVESGSILVGKVTPKGESDQPPESKLLQAIFGEKNKDVKDTSLRLPNGTRGRVVDVRIFSREKGDELAVGINYIVRIYVAQKRKIQIGDKMAGRHGNKGIISKILPRQDMPYLPNGTPVDIILNPLGVPSRMNVGQIFECILGISAFNLKKRFRILPFDEMYESDSSRILINQKLKEAQTLTNLDYLFNENHLGKVALFDGRSGEKFDNPVLVGKIYMMKLVHLVDDKIHSRSTGPYSLVTQQPLGGKA
type: DOMAIN
name: DNA-dir_RNAP_su2_dom
description: DNA-directed RNA polymerase, subunit 2, hybrid-binding domain

phrase: QFMDQVNPLAELTHKRRVSSLGPGGLSKERAGFAVRDIHPSHYGRICPIETPEGPNAGLIGSLAIYAR
type: DOMAIN
name: RNA_pol_Rpb2_3
description: RNA polymerase Rpb2, domain 3

phrase: LSVQRESFYSFLTEGLAKELNNFSPIIDYTGKLELHLVTNQLVIKKPKFSFEEAKRRDCSYTISINIVTQLFNKNSGDVKEQEILLGEIPLMTQKGTFVINGAERVIVNQIVRSPGIYFNSEMDKNNLKTFNFLIIPNRGAWLKCEIDKNDLIWIRIDKNKKINLSIFFKALGIDHDDLRIKNAFRQPEFIYKNLNKDENYTQQEALEELHKKLFPGEPATSEASTKILYFKFFNPKKYDLGIVGRKKINKKLDLNSPENIRILTIQDILSGINYLINLKFGFGNIDDIDHLANRRLKSVGELLQSQISIGLIRLERLIKERMTICEQSSLVPSALINPKP
type: DOMAIN
name: RNA_pol_bsu_protrusion
description: RNA polymerase, beta subunit, protrusion