nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MLPAALLRHPGLRRLVLQARTYAQAAASPAPAAGPGQMSFTFASPTQVFFDGANVRQVDVPTLTGAFGILASHVPTLQVLRPGLVMVHAEDGTTTKYFVSSGSVTVNADSSVQLLAEEVVTLDMLDLGAARANLEKAQSELSGAADEAARAEIQIRIEANEALVKALE

Annotated regions:
phrase: MSFTFASPTQVFFDGANVRQVDVPTLTGAFGILASHVPTLQVLRPGLVMVHAEDGTTTKYFVSSGSVTVNADSSVQLLAE
type: DOMAIN
name: ATP_synth_F1_dsu/esu_N
description: ATP synthase, F1 complex, delta/epsilon subunit, N-terminal

phrase: LDLGAARANLEKAQSELSGAADEAARAEIQIRIEANEALVK
type: DOMAIN
name: ATPD_C_metazoa
description: F1F0-ATP synthase delta subunit, C-terminal domain, metazoan
Protein sequence:
MRFDVVTLFPDMFGLVRDQGVTGRAHAQGLWALHAWNPRDFTQDVHRTVDDRPYGGGPGMVMMAAPLEAAVAAAQAARAAQGLQAAPVILLSPAGRRYDQAEATTLAAGTGAIFICGRYEGVDQRFIERCVTHELSLGDFVLSGGELAALAMMDAAVRLLPGVLNDGDSALQDSFNAALDGLLDSPHYTRPEVYEGVPVPQPLLSGHHANIARWRREQSLRLTASRRPELIERARGEGRLSKADERFLAGLAGERKS

Annotated regions:
phrase: GRAHAQGLWALHAWNPRDFTQDVHRTVDDRPYGGGPGMVMMAAPLEAAVAAAQAARAAQGLQAAPVILLSPAGRRYDQAEATTLAAGTGAIFICGRYEGVDQRFIERCVTHELSLGDFVLSGGELAALAMMDAAVRLLPGVLNDGDSALQDSFNAALDGLLDSPHYTRPEVYEGVPVPQPLLSGHHANIARWRREQSLRLTASRR
type: DOMAIN
name: tRNA_MeTrfase_TRMD/TRM10
description: tRNA methyltransferase TRMD/TRM10-type domain
Protein sequence:
MEDFVRQCFNPMIVELAEKAMKEYGEDPKIETNKFAAICTHLEVCFMYSDFHFIDERGESIIVESGDPNALLKHRFEIIEGRDRTMAWTVVNSICNTTGVEKPKFLPDLYDYKENRFIEIGVTRREVHIYYLEKANKIKSEKTHIHIFSFTGEEMATKADYTLDEESRARIKTRLFTIRQEMASRGLWDSFRQSERGEETIEERFEITGTMRRLADQSLPPNFSSLENFRAYVDGFEPNGCIEGKLSQMSKEVNARIEPFLKTTPRPLRLPDGPPCSQRSKFLLMDALKLSIEDPSHEGEGIPLYDAIKCMKTFFGWKEPNIIKPHEKGINPNYLLAWKQVLAELQDIENEEKIPKTKNMKKTSQLKWALGENMAPEKVDFEDCKDISDLKQYDSDEPEPRSLASWIQSEFNKACELTDSSWIELDEIGEDIAPIEHIASMRRNYFTAEVSHCRATEYIMKGVYINTALLNASCAAMDDFQVIPMISKCRTKEGRRKTNLYGFIIKGRSHLRNDTDVVNFVSMEFSLTDPRLEPHKWEKYCVLEIGDMLLRTAIGQVSRPMFLYVRTNGTSKIKMKWGMEMRRCLLQSLQQIESMIEAESSVKEKDMTKEFFENKSETWPIGESPKGVEEGSIGKVCRTLLAKSVFNSLYASPQLEGFSAESRKLLLIVQALRDNLEPGTFDLGGLYEAIEECLINDPWVLLNASWFNSFLTHALK

Annotated regions:
Protein sequence:
MKTRKGIILAGGSGTRLYPVTMAVSKQLLPIYDKPMIYYPLSTLMLAGIRDILIISTPQDTPRFQQLLGDGSQWGLNLQYKVQPSPDGLAQAFIIGEEFIGGDDCALVLGDNIFYGHDLPKLMDTAVNRESGATVFAYHVNDPERYGVVEFDDNGTAISLEEKPQEPKSNYAVTGLYFYDNDVVEMAKNLKPSARGELEITDINRIYMDQGRLSVAMMGRGYAWLDTGTHQSLIEASNFIATIEERQGLKVSCPEEIAHRKGFIDAEQVKVLAEPLKKNAYGQYLLKMIKGY

Annotated regions:
phrase: KGIILAGGSGTRLYPVTMAVSKQLLPIYDKPMIYYPLSTLMLAGIRDILIISTPQDTPRFQQLLGDGSQWGLNLQYKVQPSPDGLAQAFIIGEEFIGGDDCALVLGDNIFYGHDLPKLMDTAVNRESGATVFAYHVNDPERYGVVEFDDNGTAISLEEKPQEPKSNYAVTGLYFYDNDVVEMAKNLKPSARGELEITDINRIYMDQGRLSVAMMGRGYAWLDTGTHQSLIEASNFI
type: DOMAIN
name: NTP_transferase_dom
description: Nucleotidyl transferase domain
Protein sequence:
MQRSKQETRKSQYKKSIDSDESRRKREEASLSIRKNKREESLLKKRTQAVPGSTPVKVDSLINQRLEQLPSLVAEINSENPDLILKSTTAFRKLLSIEKSPPIEEVIKTGIVPRLVKFLYMQDFPQLQFEAAWALTNIASGTPEQTRVVIENGAIQVFVLLLSSPHDDVREQAVWALGNIAGDSHYCRDLVLSHNALPPLLSLLQNPAAIKVSMVRNATWTLSNFCRGKPQPPFEIVRASLPVLAKLIYYQDEEVLIDACWALSYLSDGSNERIQEVIDAKVCRKMVELLGHPTIAVQTPALRTIGNIVTGDDNQTQIVLSVQALSHLLNLLQSPKRAIRKEACWTISNITAGDKNQIQQVIDANIIPSLVYLLANAEFEIQKEAAWAISNATSCGTPQQIHFLVSQGCVKPLCDLLKVSDPRIINVALEGIENILVAGKKEAQVTGVNPYKKIIEDADGLGKIYDLQHHMNKDTFEKVSRIISTYLEDEQEDEGDLMPEGSSFSFSNQTNSNFNL

Annotated regions:
phrase: MQRSKQETRKSQYKKSIDSDESRRKREEASLSIRKNKREESLLKKRTQAVPGST
type: DOMAIN
name: Importin-a_IBB
description: Importin-alpha, importin-beta-binding domain

phrase: RKSQYKKSIDSDESRRKREEASLSIRKNKREESLLKKRTQAVPGSTPVKVDSLINQRLEQLPSLVAEINSENPDLILKST
type: DOMAIN
name: Importin-a_IBB
description: Importin-alpha, importin-beta-binding domain

phrase: GAIQVFVLLLSSPHDDVREQAVWALGNI
type: REPEAT
name: Armadillo
description: Armadillo

phrase: QALSHLLNLLQSPKRAIRKEACWTISNITAGDKN
type: REPEAT
name: Armadillo
description: Armadillo

phrase: NALPPLLSLLQNPAAIKVSMVRNATWTLSN
type: REPEAT
name: Armadillo
description: Armadillo

phrase: NPYKKIIEDADGLGKIYDLQHHMNKDTFEKVSRIISTYLEDEQEDEGDLMP
type: REPEAT
name: Arm_3
description: Atypical Arm repeat

phrase: GIVPRLVKFLYMQDFPQLQFEAAWALTNIASGTPEQTRVVIEN
type: REPEAT
name: Armadillo
description: Armadillo

phrase: KNQIQQVIDANIIPSLVYLLANAEFEIQKEAAWAISNA
type: REPEAT
name: Armadillo
description: Armadillo

phrase: TPEQTRVVIENGAIQVFVLLLSSPHDDVREQAVWALGNI
type: REPEAT
name: Armadillo
description: Armadillo

phrase: QPPFEIVRASLPVLAKLIYYQDEEVLIDACWALSYLS
type: REPEAT
name: Armadillo
description: Armadillo

phrase: TPQQIHFLVSQGCVKPLCDLLKVSDPRIINVALEGIENI
type: REPEAT
name: Armadillo
description: Armadillo

phrase: SNERIQEVIDAKVCRKMVELLGHPTIAVQTPALRTIGNI
type: REPEAT
name: Armadillo
description: Armadillo

phrase: SPPIEEVIKTGIVPRLVKFLYMQDFPQLQFEAAWALTNIA
type: REPEAT
name: Armadillo
description: Armadillo

phrase: DNQTQIVLSVQALSHLLNLLQSPKRAIRKEACWTISNIT
type: REPEAT
name: Armadillo
description: Armadillo

phrase: CRDLVLSHNALPPLLSLLQNPAAIKVSMVRNATWTLSNFC
type: REPEAT
name: Armadillo
description: Armadillo

phrase: SNERIQEVIDAKVCRKMVELLGHPTIAVQTPALRTIGNIV
type: REPEAT
name: Armadillo
description: Armadillo

phrase: KSPPIEEVIKTGIVPRLVKFLYMQDFPQLQFEAAWALTNIA
type: REPEAT
name: Armadillo
description: Armadillo

phrase: TPEQTRVVIENGAIQVFVLLLSSPHDDVREQAVWALGNIA
type: REPEAT
name: Armadillo
description: Armadillo

phrase: DDNQTQIVLSVQALSHLLNLLQSPKRAIRKEACWTISNIT
type: REPEAT
name: Armadillo
description: Armadillo

phrase: SHYCRDLVLSHNALPPLLSLLQNPAAIKVSMVRNATWTLSNFC
type: REPEAT
name: Armadillo
description: Armadillo

phrase: KPQPPFEIVRASLPVLAKLIYYQDEEVLIDACWALSYLS
type: REPEAT
name: Armadillo
description: Armadillo

phrase: TPQQIHFLVSQGCVKPLCDLLKVSDPRIINVALEGIENIL
type: REPEAT
name: Armadillo
description: Armadillo

phrase: DKNQIQQVIDANIIPSLVYLLANAEFEIQKEAAWAISNAT
type: REPEAT
name: Armadillo
description: Armadillo
Protein sequence:
MLSPCLAVPATECRDPADAPAAPARHTGPARPRKRRPRNWKPHLPRERLLERGPAALTDAELIALLLGTGGGGRDVFASARALLARFGDSLRDMLDAEPDVFATHPGIGTARSAVLIAVTEIARRALVEKARERLQIDSPGAVEDYLRLRIGTRPHEVFVTLYLDARHGLIDVEESARGSLTRMAVYPREIVRRALVLNAAALIIAHNHPSGAVQPSAEDRRLTRVLHEALALIDAKLLDHVVVGTADTFSFARAGWL

Annotated regions:
phrase: HNHPS
type: CONSERVED_SITE
name: UPF0758_CS
description: Uncharacterised protein family UPF0758, conserved site

phrase: IDSPGAVEDYLRLRIGTRPHEVFVTLYLDARHGLIDVEESARGSLTRMAVYPREIVRRALVLNAAALIIAHNHPSGAVQPSAEDRRLTRVLHEALALIDAKLLDHVVVGTADTFSFARA
type: DOMAIN
name: RadC_JAB
description: RadC-like JAB domain

phrase: AVEDYLRLRIGTRPHEVFVTLYLDARHGLIDVEESARGSLTRMAVYPREIVRRALVLNAAALIIAHNHPSGAVQPSAEDRRLTRVLHEALALIDAKLLDHVVVGTADTFSF
type: DOMAIN
name: RadC_JAB
description: RadC-like JAB domain

phrase: PRERLLERGPAALTDAELIALLLGTGGGGRDVFASARALLARFGDSLRDMLDAEPDVFATHPGIGTAR
type: DOMAIN
name: UPF0758_N
description: UPF0758, N-terminal

phrase: QIDSPGAVEDYLRLRIGTRPHEVFVTLYLDARHGLIDVEESARGSLTRMAVYPREIVRRALVLNAAALIIAHNHPSGAVQPSAEDRRLTRVLHEALALIDAKLLDHVVVGTADTFSFARAGW
type: DOMAIN
name: MPN
description: MPN domain
Protein sequence:
MYKIQLLSCIALTLALVANGAPTSSSTGNTMKEVKSLLLDLQLLLEKVKNPENLKLSKMHTFNFFMPKVNATELKHLNCLLEELKLLEDVLSLSPSKNLNPKEIKDSMDEIKDLMDNIKRIVLELQGSETSFKCEYDAATVKAVEFLNKWITFCQRIYSTMT

Annotated regions:
phrase: TELKHLNCLLEE
type: CONSERVED_SITE
name: IL-2_CS
description: Interleukin-2, conserved site
Protein sequence:
MAKKDKKPKVNTIVTKDGESLKVFEDLNDFEMFIKNETEDEEFDHIHCKLTYYPPFVLHESHDDPEKIKDTNNSHNKKFVRHLHQHVEKHLLKDIKEALHKPELKFHDKSKDETFEHIVWHYGEETEYHDRKFRIQVTVTCNHDDAMVDVDYKTIPL

Annotated regions:
Protein sequence:
MTDASKDIVSVRSLTKSYGATVVLKGVDFSVARGEIHALLGGNGAGKSTLIRVITGTAAKDGGELVFRDMAGNILTEADGRRKVAVVHQELALLPHLTVAESIALPHFRKGSRVYDGRTAGSQAYAALSMIDRDFAGTALNRLVGDLSLHEGQMVEIARALSSGAELILLDEPTANLTAAETERLFGVLRKLTRGNGLSVVFVSHRMKEIRQIAHVCSIIRDGRTVVGNVPTAELSDLAIIEHMGQAQATAVAHSARPAPVASLSDEPLTIAETGFSVTLQPGTILGVAGAPAGPETLIAALIGAAHERRWTVTRAGWPDRFRSPREAARLGAGFVTGDRSHRGILHSLPIIDNVLASRRATRGSLFATKREEVECLDLMQALKVKAGSLWHLPNTLSGGTQQKLLLARWLNVPSRLLVLEEPTRGVDIGTKREIYQLIRDMATTGTAIVWWSTENAELLEICDQVLAFDTEGRSSGVIERDELSEDKLATLTGMAA

Annotated regions:
phrase: RGEIHALLGGNGAGKSTLIRVITGTAAKDGGELVFRDMAGNILTEADGRRKVAVVHQELALLPHLTVAESIALPHFRKGSRVYDGRTAGSQAYAALSMIDRDFAGTALNRLVGDLSLHEGQMVEIARALSSGAELILLDEPTANLTAAETERLFGVLRKLTRGNGLSVVFVSHRMKEIRQIAHVCSIIRDGRTVVGNV
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: ARPAPVASLSDEPLTIAETGFSVTLQPGTILGVAGAPAGPETLIAALIGAAHERRWTVTRAGWPDRFRSPREAARLGAGFVTGDRSHRGILHSLPIIDNVLASRRATRGSLFATKREEVECLDLMQALKVKAGSLWHLPNTLSGGTQQKLLLARWLNVPSRLLVLEEPTRGVDIGTKREIYQLIRDMATTGTAIVWWSTENAELLEICDQVLAFDTEGRSSGVIERDELSEDKLATLTGM
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: LKGVDFSVARGEIHALLGGNGAGKSTLIRVITGTAAKDGGELVFRDMAGNILTEADGRRKVAVVHQELALLPHLTVAESIALPHFRKGSRVYDGRTAGSQAYAALSMIDRDFAGTALNRLVGDLSLHEGQMVEIARALSSGAELILLDEPT
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: FSVTLQPGTILGVAGAPAGPETLIAALIGAAHERRWTVTRAGWPDRFRSPREAARLGAGFVTGDRSHRGILHSLPIIDNVLASRRATRGSLFATKREEVECLDLMQALKVKAGSLWHLPNTLSGGTQQKLLLARWLNVPSRLLVLEEP
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: VSVRSLTKSYGATVVLKGVDFSVARGEIHALLGGNGAGKSTLIRVITGTAAKDGGELVFRDMAGNILTEADGRRKVAVVHQELALLPHLTVAESIALPHFRKGSRVYDGRTAGSQAYAALSMIDRDFAGTALNRLVGDLSLHEGQMVEIARALSSGAELILLDEPTANLTAAETERLFGVLRKLTRGNGLSVVFVSHRMKEIRQIAHVCSIIRDGRTVVGNVPTAELSDLAIIEHMGQ
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain
Protein sequence:
MFTKYKFLYFLFDSTFFKYWYVIPMAMKIYIEGFDEKGYGVGNNIHVPFAYPGDIVEVKVRRKGKKKIGEIVKIIEESPYRTSNKYCAHLGKCGGCLWGLMDYQYQLEFKKKVIENLFGYDKDIIPSPKTIYYRNRMDYPIYNKVSLKEPGKWYGYIPIKECKMLSKEAEIIINEFNKFIEKYKIPSWDTVKHTGFLRYLVIREGKFTKERMIHIITYKRKKFEELWDFIENIKDLVTSVYWGIREDLGDVSISEKLYHYYGSKFLRERILDIEYYISPNSFFQTNSYQAVNLVKIVKEFLEPSENDVVLDLYSGVGLFSLQIANEVKKVIGIEIVEEAVEMAKLNASINNIDAEFIASPVEKAPIIKANKIIVDPPRAGLTNKAIEYIEKINPDTIVYVSCNPYTQKRDINKLKGYKIIDMQPLDMFPNTPHIENVILMKKSRTTD

Annotated regions:
phrase: DPPRAGLTNKAIEYIEKINPDTIVYVSCNPY
type: ACTIVE_SITE
name: MeTrfase_TrmA_AS
description: RNA methyltransferase TrmA, active site
Protein sequence:
MTEVFLASRNPKKLGEMQRILAELLPEIRVLGLDDVDPYDEPVEDAPDFDGNALLKARAGFERTGLPSLADDSGLAVDALNGMPGVLSARWSGRPKDDDRNNRLLLEQLGDVPDERRGAHFHASVAFVHAGGELVVGGDMAGRVIREPRGTGGFGYDVLFVPDDQDGALTSAEMSPEVKDAISHRGRALREIAALVVEVLQGS

Annotated regions:
Protein sequence:
MPVKLATALSNNLFPALDSQLRAGRHIGIEELENHVFLMDFQEVLEEFYSRYNVELIRAPEGFFYLRPRSTTLIPRSVLSELDMMVGKILCYLYLSPERLAHEGIFSQQELYEELLSLADESKLLKLVNQRSTGSDLDRQKLQEKVRTSLNRLRRLGMIYFMGNDSSKFRITESVFRFGADVRSGDDAREAQLRMIRDGEAMPVEGSLSLKDDSDDNDRTDDTAPETGEDE

Annotated regions:
Protein sequence:
MAGINQTKCDLGFQITFNTVYRFSQFYTFSVSSFAVPGLIYFMFKRLFQLYFHGNLKTLLIAYFISILLYAVMLCFAFGYQFFVPFFIKSNCDLIINKTLFKYIHTSVIFLLTTPMMFPLGFSIERFTAMAMASRYENIRTLIGPVLVIFLIIPNCIIFYFLFQHETYDDTFISFLMLPNTTAVNFNTYLWFLLYLNIGNLALNVLLLLVHRKFKRRLLLHKTSLSTRYAIEEISQSSKFTLIITFTHLLFFGCNTICSILVRVLGEPFFGSFINHSVARGVNCAVPTYNLVIVVVGFVSLSKLNSRRQQEVQTTVQLKTTGKEGARNYDNITANQWATITQIGF

Annotated regions:
Protein sequence:
MSVSLSRLERQLGYTFKDQELMVLALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFPQAREGQLSRLRARLVKGETLALLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIGAIYLDAGMEAARERVLAWLTTEFDSLTLVDTNKDPKTRLQEFLQSRACELPRYEVVDIQGEPHCRTFFVECEINLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGHE

Annotated regions:
phrase: LSRLERQLGYTFKDQELMVLALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFPQAREGQLSRLRARLVKGETLALLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIGAIYLDA
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: DPKTRLQEFLQSRACELPRYEVVDIQGEPHCRTFFVECEINLLNEKSRGQGVSRRIAEQVAAAAALIALG
type: DOMAIN
name: dsRBD_dom
description: Double-stranded RNA-binding domain

phrase: PKTRLQEFLQSRACELPRYEVVDIQGEPHCRTFFVECEINLLNEKSRGQGVSRRIAEQVAAAAAL
type: DOMAIN
name: dsRBD_dom
description: Double-stranded RNA-binding domain

phrase: PKTRLQEFLQSRACELPRYEVVDIQGEPHCRTFFVECEINLLNEKSRGQGVSRRIAEQVAAAAALIAL
type: DOMAIN
name: dsRBD_dom
description: Double-stranded RNA-binding domain

phrase: ELMVLALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFPQAREGQLSRLRARLVKGETLALLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIGAIYLDAGMEAARERVLAWLTTEFDSLT
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: ELMVLALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFPQAREGQLSRLRARLVKGETLALLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIGAIYLDAGMEAARERVLAWLTTEFDSLT
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: DQELMVLALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFPQAREGQLSRLRARLVKGETLALLARGFDLGEYLRLGSGELKSGGFRRESILADALEALIGAIYLDAGMEAARERVLAWL
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: ERLEFLGD
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain
Protein sequence:
MEFKVIAEYFDKLEKISSRLQLTALLADLLSKSDKTIIDKVVYIIQGKLWPDFLGYPELGIGEKFLIKAISIATNTDENSVENLYKTIGDLGEVARRLKSKQQSTGILGFLGTTSKESLTVDEVYSTLSKVALTTGEGSRDLKIRLLAGLLKKADPLEAKFLVRFVEGRLRVGIGDATVLDAMAIAFGGGQSASEIIERAYNLRADLGNIAKIIVEKGIEALKTLKPQVGIPIRPMLAERLSNPEEILKKMGGNAIVDYKYDGERAQIHKKEDKIFIFSRRLENITSQYPDVVDYVSKYIEGKEFIIEGEIVAIDPESGEMRPFQELMHRKRKSDIYEAIKEYPVNVFLFDLMYYEDVDYTTKPLEARRKLLESIVKPNDYVKIAHHIQANNVEDLKSFFYRAISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLVVVGGFYGKGKRGGKISSLLMAAYNPKTDSFESVCKVASGFSDEQLDELQKKLMEIKRDVKHPRVNSKMEPDIWVEPVYVAEIIGSEITISPLHTCCQDVVEKDAGLSIRFPRFIRWRDDKSPEDATTTDEILEMYNKQPKKKIESPAVDESV

Annotated regions:
phrase: RGGKISSLLMAAYNPKTDSFESVCKVASGFSDEQLDELQKKLMEIKRDVKHPRVNSKMEPDIWVEPVYVAEIIGSEITISPLHTCCQDVVEKDAGLSIRFPRFIRWRDD
type: DOMAIN
name: DNA_ligase_ATP-dep_C
description: DNA ligase, ATP-dependent, C-terminal

phrase: EGVMVKAIGKDAIYQAGARGWLWIKL
type: CONSERVED_SITE
name: DNA_ligase_ATP-dep_CS
description: DNA ligase, ATP-dependent, conserved site

phrase: EFKVIAEYFDKLEKISSRLQLTALLADLLSKSDKTIIDKVVYIIQGKLWPDFLGYPELGIGEKFLIKAISIATNTDENSVENLYKTIGDLGEVARRLKSKQQSTGILGFLGTTSKESLTVDEVYSTLSKVALTTGEGSRDLKIRLLAGLLKKADPLEAKFLVRFVEGRLRVGIGDATVLDAM
type: DOMAIN
name: DNA_ligase_ATP-dep_N
description: DNA ligase, ATP-dependent, N-terminal

phrase: PMLAERLSNPEEILKKMGGNAIVDYKYDGERAQIHKKEDKIFIFSRRLENITSQYPDVVDYVSKYIEGKEFIIEGEIVAIDPESGEMRPFQELMHRKRKSDIYEAIKEYPVNVFLFDLMYYEDVDYTTKPLEARRKLLESIVKPNDYVKIAHHIQANNVEDLKSFFYRAISEGGEGVMVKAIGKDAIYQAGARGWLWIKL
type: DOMAIN
name: DNA_ligase_ATP-dep_cent
description: DNA ligase, ATP-dependent, central

phrase: DYKYDGER
type: CONSERVED_SITE
name: DNA_ligase_ATP-dep_CS
description: DNA ligase, ATP-dependent, conserved site

phrase: EAIKEYPVNVFLFDLMYYEDVDYTTKPLEARRKLLESIVKPNDYVKIAHHIQANNVEDLKSFFYRAISEGGEGVMVKAIGKDAIYQAGARGWLWIKLKRDYQSEMADTVDLVVVGGFYGKGKRGGKISSLLMAAY
type: DOMAIN
name: DNA_ligase_ATP-dep_cent
description: DNA ligase, ATP-dependent, central
Protein sequence:
MLAVRSLQHLTTVIFITAYGLVLAWYIVFGASPLHRCIYAVRPAGAHNDTALVWMKINQTLLFLGPPTAPPGGAWTPHARVCYANIIEGRAVSLPAIPGAMSRRVMNVHEAVNCLEALWDTQMRLVVVGWFLYLAFVALHQRRCMFGVVSPAHSMVAPATYLLNYAGRIVSSVFLQYPYTKITRLLCELSVQRQTLVQLFEADPVTFLYHRPAIGVIVGCELLLRFVALGLIVGTALISRGACAITHPLFLTITTWCFVSIIALTELYFILRRGSAPKNAEPAAPRGRSKGWSGVCGRCCSIILSGIAVRLCYIAVVAGVVLVALRYEQEIQRRLFDL

Annotated regions:
Protein sequence:
MSRVLSEVLAAVRPVDQSLFPVAKAHLDNLTKPRGSLGRLEELAARLFVIGGGAKPVVDPARIYVCAGDHGVAAEGVSLFPQEVTRQMVANFLAGGAGINVLAATAGIDLRVVDAGCLGDPFAPHPRFAGARVASGTANLAEAPAMTREQCESALLLGVSLAEAAAAEGVRALGTGDMGIANTTPSTALFCAYLGLSPAEITGPGTGLDAGGVGRKAAIVAKGLALHADVVAGGDPVAVLACLGGLEIACLAGLVIGAAACRLPIAVDGFISTAAYVAARAICPTVADYAVVSHASAEPGYAPIMAALGQKPLLDLGLRLGEGTGAALALFLMRSACNIYNDMATFASAGVSEG

Annotated regions:
Protein sequence:
MALNPLEQFKIHTIVELPKLFGHDINFTNSSLFMMISVVSVILFLLLGVRKGAVIPGYLQAAVEYVYDFITSIIESNTGSKGLKHIPLVFTVFTFTLSCNLVGMLPYSFTVTSHVIVTFALSMIVFTYTTIVGFKEKGINFLRILLPEGIPSWLAPMMVFIKLFAYLARPISLSIRLAANMIAGHTIIKVVAGFIMNMHLILTPIPFLFIIALIGFEVFVAILQAYIFTILTCIYLSDAVK

Annotated regions:
phrase: SLSIRLAAN
type: ACTIVE_SITE
name: ATP_synth_F0_asu_AS
description: ATP synthase, F0 complex, subunit A, active site
Protein sequence:
MKVALVYNDKVETLAVVKALEKLLNARKIEIDPENPDVVITIGGDGTLISGFHKYQNLVDKIRFIGVHTGHLGFYTDWRNFEINKMVDNLTKKQPSSASYPLLELIITTGAGEKKKLLALNEATIKRVSKTLKADVYIRDQFFESFKGDGLCVSTPTGSTAYSKSLGGAVIHPRLKALQMTEIASINNRVFRTLSSPIVIAPDEWITIKPETGSDDHYVVTFDGYEFNHKHIKKIEYRISQHVIRFDKYQHTHFWNRVEDAFIGQPKDKQ

Annotated regions:
Protein sequence:
MSSNPSSVEKKLLHYTGKAIADFNMIQRGDKVMVCLSGGKDSFTLLTILNQLRIKSGNKFEIFAFTLDQAQPGWNDACLRQWLAEKSIPHEILTRDTYSIVKEKIPEGKTYCSLCSRLRRGIIYRYAEENGFNKIALGHHRDDLVRTLMMSILYNGDIRSMPPKLLSDNKKHIVIRPLCYVQEKDIITFASEQAFPIIPCNLCGSQENLMRKKVASLIDQLAIENPKVPSNMLHALQSLKPSQLMDQNFWNFKNLEDGLETTQSIQCEEVFNAQEFELEDEKI

Annotated regions:
phrase: KVMVCLSGGKDSFTLLTILNQLRIKSGNKFEIFAFTLDQAQPGWNDACLRQWLAEKSIPHEILTRDTYSIVKEKIPEGKTYCSLCSRLRRGIIYRYAEENGFNKIALGHHRDDLVRTLMMSILYNGDIRSMPPKLLSDNKKHIVIRPLCYVQEKDIITFASEQ
type: DOMAIN
name: TilS/TtcA_N
description: tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal
Protein sequence:
MSSTATVTESTHFFPNEPQGPSIKTETIPGPKGKAAAEEMSKYHDISAVKFPVDYEKSIGNYLVDLDGNVLLDVYSQIATIPIGYNNPTLLKAAKSDEVATILMNRPALGNYPPKEWARVAYEGAIKYAPKGQKYVYFQMSGSDANEIAYKLAMLHHFNNKPRPTGDYTAEENESCLNNAAPGSPEVAVLSFRHSFHGRLFGSLSTTRSKPVHKLGMPAFPWPQADFPALKYPLEEHVEENAKEEQRCIDQVEQILTNHHCPVVACIIEPIQSEGGDNHASPDFFHKLQATLKKHDVKFIVDEVQTGVGSTGTLWAHEQWNLPYPPDMVTFSKKFQAAGIFYHDLALRPHAYQHFNTWMGDPFRAVQSRYILQEIQDKDLLNNVKSVGDFLYAGLEELARKHPGKINNLRGKGKGTFIAWDCESPAARDKFCADMRINGVNIGGCGVAAIRLRPMLVFQKHHAQILLKKIDELI

Annotated regions:
phrase: FIVDEVQTGVGSTGTLWAHEQWNLPYPPDMVTFSKKFQA
type: CONSERVED_SITE
name: Aminotrans_3_PPA_site
description: Aminotransferases class-III pyridoxal-phosphate attachment site
Protein sequence:
MWFKNLQIYRLPAPWAITAEQLETDLAPHAFLPCSSLDMQSQGWVSPRENGALVYTLNKQIMLLLGTEKKLLPTTVINQVTKIKAAEIEEQQGFKPGRKQMKELKEDVTDELLPRAFSIWRQTWVWIDPVNGWLVVDAGSPAKADEVIKLLIKSVDKLPLDTLHVVQSPVAAMTQWLLTDEAPSGFTVDQDTELRSTGEGKATVRYVRHTLEAEDVQRHIAAGKQCTRLAMSWADKISFVLTESLAIKRVAPLDVIKENTDTTAQNDDERFDSDVMLMTGELSRMLADLVQALGGEQAKK

Annotated regions:
Protein sequence:
MAEQISLVDVSSSVSLRGEDSSNVALLRDVFLPDVAASDPAESSVDVQDEHSSDDSDNENEVFPKQNDFSQRRRIQNAQFEALLSKCTDADSNEAFDRAPIALSDGELSIAHLVKKQDLGNGMLDPREYQIELFERAKTQNTIAVLDTGSGKTLIAVLLLRHTILNELDDRANGKTHRVSFFLVDSVTLAYQQAAVLRNNIDQNVAHFFGAMGTDLWDKRTWDKHLQRNMVIVCTAEILNQCLLNSYVRMDQINLLIFDEAHHAKKDHPYARIIRDSYFKAQPSQRPRVFGMTASPIDTKGDITEAATRLETFLDSRIATTSKITLLREVVSRPIEKVWAYNRLEPPFATELYKLMDTRYGNIKVLEGVYRFAWNASSELGKWCSDRAWWHALADDVLPKLEGNINKLIESNTMKAEHGAVFKDIIRIREASETVKNYFFTDPELPGELSPKVQRLRMELSKHFNDTTGTKCIVFTQKRYTAKILNELFTVLNIPNLRPGVLIGVRPGDIGGMNITFRQQFLALVKFRTGEINCLFATSVAEEGLDIPDCNLVIRFDLYRTLIQYVQSRGRARHCTSTYAIMVEKDNAEHEGRLKEIREAENIMRRFCEILPEDRILHGNDHDLDSFLQEEEGRRTFTVKSTGAKLTYHSAIAILARYASSLQYEKETVPQVTYVVTIASNAYVCEVILPEKSPIRGLTGSPAMRKAVAKRSAAFDTCLLLRKNRLLDGYFNSIYHRRLPAMRNAKLAITCKRTNAYDMLLKPSIWAK

Annotated regions:
phrase: LSKHFNDTTGTKCIVFTQKRYTAKILNELFTVLNIPNLRPGVLIGVRPGDIGGMNITFRQQFLALVKFRTGEINCLFATSVAEEGLDIPDCNLVIRFDLYRTLIQYVQSRGR
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: ELSKHFNDTTGTKCIVFTQKRYTAKILNELFTVLNIPNLRPGVLIGVRPGDIGGMNITFRQQFLALVKFRTGEINCLFATSVAEEGLDIPDCNLVIRFDLYRTLIQYVQSRGRARHCTSTYAIMVEKDNAEHEGRLKEIREAENIMRRFCEILPEDRIL
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: RYTAKILNELFTVLNIPNLRPGVLIGVRPGDIGGMNITFRQQFLALVKFRTGEINCLFATSVAEEGLDIPDCNLVIRFDLYRTLIQYVQSRGRARH
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: GMLDPREYQIELFERAKTQNTIAVLDTGSGKTLIAVLLLRHTILNELDDRANGKTHRVSFFLVDSVTLAYQQAAVLRNNIDQNVAHFFGAMGTDLWDKRTWDKHLQRNMVIVCTAEILNQCLLNSYVRMDQINLLIFDEAHHAKKDHPYARIIRDSYFKAQPSQRPRVFGMTASPIDTKGDITEAATRLETFLDSRIATTSKITL
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: DPREYQIELFERAKTQNTIAVLDTGSGKTLIAVLLLRHTILNELDDRANGKTHRVSFFLVDSVTLAYQQAAVLRNNIDQNVAHFFGAMGTDLWDKRTWDKHLQRNMVIVCTAEILNQCLLNSYVRMDQINLLIFDEAHHAKKDHPYARIIRDSYFKAQPSQRPRVFGMTASP
type: DOMAIN
name: Helicase/UvrB_N
description: Helicase/UvrB, N-terminal

phrase: AIAILARYASSLQYEKETVPQVTYVVTIASNAYVCEVILPEKSPIRGLTGSPAMRKAVAKRSAAFDTCLLLRKNRLLDGYFNSIYHRRLP
type: DOMAIN
name: Dicer_dimerisation_dom
description: Dicer dimerisation domain

phrase: AIAILARYASSLQYEKETVPQVTYVVTIASNAYVCEVILPEKSPIRGLTGSPAMRKAVAKRSAAFDTCLLLRKNRLLDGYFNSIYH
type: DOMAIN
name: Dicer_dimerisation_dom
description: Dicer dimerisation domain

phrase: LFERAKTQNTIAVLDTGSGKTLIAVLLLRHTILNELDDRANGKTHRVSFFLVDSVTLAYQQAAVLRNNIDQNVAHFFGAMGTDLWDKRTWDKHLQRNMVIVCTAEILNQCLLNSYVRMDQINLLIFDEAHHAKKDHPYARIIRDSYFKAQPSQRPRVFGMTASPIDTKGDITEAATRLETF
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain
Protein sequence:
MIIEERKSHELNLESIDNDLRLESVRQNAEKLGWDHFARSVRRNLQEKHHTLEASIRLDVLGSLAFMKAHLPIDKDESLNRKIQSLADGLGENCVVAAHIGGISIKSHDVSVDIGIAEEAIVSCKIGYFGQPLFDAPEALALLKSDEFSKLRDSIAEVLSLIPKEISLSDKNACKDALRALEHVLIRDAADSSFSAINNNKYGFYSPRNELRPGRLYYIAEPMLIRVAEKEGKMHADNSHLDSLPYIEIFFVKSNKKSKLPVFNQSGEWTTFNDAKVCICIRFKHAFLFSQHTIRKLAKTVPKSPVVRSYVNFYRYATGRPTVKKNLELLTQFPNETDIQQHYNVDSSKLASDSDSLVVEMFLGDLRELPKLIETLRSEWMHASLWESIVAMCEPNQDAVKKEVRAANLELLLRRNEFNLKFDTEFGNMSMQISEKEPRRYFIRTVSQLTGDTPSSDLDNLLTEKLNSTWSIPISLTFALSTLNCRLNSLLSPLNYVKPSNPFDSDKRQQWWLGANKTHTNITVEKVKKRIVLEIGPVIEPKELVYTRQEDEELCGSLLSSFGEVDQYYVQTSTIGKTGPQPRPKREPSQLASMGMMSAELDMARNRQSMEHAMHPRPQDLRELSNLESARIQMRQSIGAAHAVGLASHQSFTSPGPMRHHPYMGGSYDSPGFYGPNIPASVPFPDAAAFGKGKQRKPRAKKQPGEEVAAPSGRGKGRKGRGAAAVGAGSGRKSSGVVGENQYGMDQMRPQLQRSYSDFQNPMNPQHM

Annotated regions:
Protein sequence:
MRVSDFNFDLPDELIARYPKTDRVSCRLLQLNGENGEIFHRTFSDVLDLIDQGDLLIFNNTHVIPARMFGRKASGGKIEVLVERMLDEHRFLAHIRSSKSPKEGAELFLGEDKLGENNGIKAVMKARHSSLFEVELSDKSTALLDVLQTIGHMPLPPYIDRPDEEADKECYQTVYSKVPGAVAAPTAGLHFDKNLLEKLKAKGVNFEFVTLHVGAGTFQPVRVENIEDHVMHAEYVEVSQEVCNAIIATKKAGKRVIAVGTTSVRSIESAALSAEEFGNPDLIEPYFSDTSIFIYPGKKFRVVDCLITNFHLPESTLIMLVSAFAGYKNTMNAYKHAVQEKYRFFSYGDAMFINKNSNVRELE

Annotated regions:
Protein sequence:
MSKSENLYSAARELIPGGVNSPVRAFTGVGGTPLFIEKADGAYLYDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTELVPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPADFAKHTLTCTYNDLASVRAAFEQYPQEIACIIVEPVAGNMNCVPPLPDFLPGLRALCDEFGALLIIDEVMTGFRVALAGAQDYYGVEPDLTCLGKIIGGGMPVGAFGGRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGVHETLDELTTRLAEGLLEAAEEAGIPLVVNHVGGMFGIFFTDAESVTCYQDVMACDVERFKRFFHMMLDEGVYLAPSAFEAGFMSVAHSMEDINNTIDAARRVFAKL

Annotated regions:
phrase: LIIDEVMTGFRVALAGAQDYYGVEPDLTCLGKIIGG
type: CONSERVED_SITE
name: Aminotrans_3_PPA_site
description: Aminotransferases class-III pyridoxal-phosphate attachment site
Protein sequence:
MGGALSTVFGSGEDATAAGTESEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEKKVSKLRA

Annotated regions:
phrase: FNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEKKV
type: DOMAIN
name: Thioredoxin_domain
description: Thioredoxin domain

phrase: STVFGSGEDATAAGTESEPSRVLKFSSSARWQLHFNEIKESNKLLVVDFSASWCGPCRMIEPAIHAMADKFNDVDFVKLDVDELPDVAKEFNVTAMPTFVLVKRGKEIERIIGAKKDELEKKVSKLR
type: DOMAIN
name: Thioredoxin_domain
description: Thioredoxin domain

phrase: VVDFSASWCGPCRMIEPA
type: CONSERVED_SITE
name: Thioredoxin_CS
description: Thioredoxin, conserved site
Protein sequence:
MDDNKKRALAAALGQIERQFGKGAVMRMGDHERTGIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIAEAQKSGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSETRVKIVKNKVSPPFRQAEFQILYGKGIYRNGEIIDLGVSQGLVEKSGAWYAYQGNKIGQGKANAAKYLQENPAIGAEIEKQIREKLLKAGVVAEAGKAAAADAKADDVADADAGY

Annotated regions:
phrase: GEIIDLGVSQGLVEKSGAWYAYQGNKIGQGKANAAKYLQENPAIGAEIEKQIREK
type: DOMAIN
name: RecA-like_C
description: RecA-like, C-terminal

phrase: RALAAALGQIERQFGKGAVMRMGDHERTGIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIAEAQKSGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSETRVKIVKNKVSPPFRQAEFQILYGKG
type: DOMAIN
name: RecA-like_N
description: RecA-like, N-terminal

phrase: GVMFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSETRVKIVKNKVSPPFRQAEFQILYGKGIYRNG
type: DOMAIN
name: RecA_monomer-monomer_interface
description: DNA recombination and repair protein RecA, monomer-monomer interface

phrase: KGRIVEIYGPESSGKTTLTLSVIAEAQKSGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRT
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: ALKFYASV
type: CONSERVED_SITE
name: DNA_recomb/repair_RecA_CS
description: DNA recombination/repair protein RecA, conserved site

phrase: GIPAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLSVIAEAQKSGATCAFVDAEHALDPEYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALVPKAEIEGEMGDMHVGLQARLMSQALRKITGNIKNANCLVIFINQ
type: DOMAIN
name: RecA_ATP-bd
description: DNA recombination and repair protein RecA-like, ATP-binding domain