nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTDLSTPQRAGSHKLPAGRRLRFVTAAALFDGHDASINIMRRILQASGVEVIHLGHNRSVDEVATAALHEDADGVAVSSYQGGHNEYFRYLVDLLRARGGERIKVFGGGGGVIVPEEIAGLERYGVEKIYSPQDGQRLGLQGMIDDMIARCAEGARAAAATGESQVGAWAAEFSEHGLPRFDSRDDVGVDRQGAVARNPSSEASRVAAAGRGDHLDRGVRAASTADTADTANTANTANTANTGSVADAADAADAADAADAADAASTASTASTASTASTASTAGIPDPASLVFRRLAQLISAFETAAIDVNTRDKLSALAEVTAIPLLGITGTGGAGKSSLTDELIRRFRLDYGDALTIAVLAIDPSRRKSGGALLGDRIRMNAIGDWGGGARVYMRSMATREASSEISDSLPDALMLCKAAGFDLIVVETSGIGQGNAAIVPFVDESLYVMTPEFGAASQLEKIDMLDFASFVAINKFDRKGARDALRDVAKQVQRNRADFAKSPEAMPVFGTIASRFNDDGVTALYRHVAEALRKHGLRSGGGRLAAPEDLRFSSGRNAIVPPARVRYLADIAQTIHAYRERADAQARLARERWQLIEARRMLVETGEAARSTVATSASPGASASSKANACTSTSSKANASPGANTTANSNASATSGTATPTDALNPTLSQLDTLITQRTASLGERERILLDTWPEIVAAYSGTEHIVRVRDREIRTALTVATLSGSEVRKVSLPKFVDHGEILRWLMLDNLPGYFPFTAGVFPFRRENEDPTRMFAGEGDPQRTNRRFKLLSEGMPAKRLSTAFDSVTLYGEEPHERPDIYGKVGNSGVSVATLDDMKTLYDGFDLCAPETSVSMTINGPAPTILAMFFNVAIDQQIARTTQRQGRPLTEDELAATRRTALENVRGTVQADILKEDQGQNTCIFSTEFSLKVMGDIQAYFVEHGVRNFYSVSISGYHIAEAGANPISQLAYTLANGFTYVEAYLARGMSIDDFAPNLSFFFSNGMDPEYTVLGRVARRIWAVAMRERYGANERSQKLKYHVQTSGRSLHAQEIDFNDIRTTLQALIAIYDNCNSLHTNAFDEAITTPTEESVRRAVAIQLIINREWGLAKNQNPNQGSFVIEELTDLVEEAVLAEFDRLTERGGVLGAMETGYQRGRIQDESMLYEHRKHDGSYPIVGVNTFLSAHPHEAPQPIALARSTDDEKQSQLQRLRAFQAQHRDAAPAALERLKRAVIDDENVFAVLMDVVRVCSLGQITHALFEVGGQYRRNM

Annotated regions:
phrase: RLRFVTAAALFDGHDASINIMRRILQASGVEVIHLGHNRSVDEVATAALHEDADGVAVSSYQGGHNEYFRYLVDLLRARGGERIKVFGGGGGVIVPEEIAGLERYGVEKIYSPQDGQRLGLQGMIDDMIARCAEGARA
type: DOMAIN
name: Cobalamin-bd
description: Cobalamin (vitamin B12)-binding domain

phrase: RWLMLDNLPGYFPFTAGVFPFRRENEDPTRMFAGEGDPQRTNRRFKLLSEGMPAKRLSTAFDSVTLYGEEPHERPDIYGKVGNSGVSVATLDDMKTLYDGFDLCAPETSVSMTINGPAPTILAMFFNVAIDQQIARTTQRQGRPLTEDELAATRRTALENVRGTVQADILKEDQGQNTCIFSTEFSLKVMGDIQAYFVEHGVRNFYSVSISGYHIAEAGANPISQLAYTLANGFTYVEAYLARGMSIDDFAPNLSFFFSNGMDPEYTVLGRVARRIWAVAMRERYGANERSQKLKYHVQTSGRSLHAQEIDFNDIRTTLQALIAIYDNCNSLHTNAFDEAITTPTEESVRRAVAIQLIINREWGLAKNQNPNQGSFVIEELTDLVEEAVLAEFDRLTERGGVLGAMETGYQRGRIQDESMLYEHRKHDGSYPIVGVNTFLSAHPHEAPQPIALARSTDDEKQSQLQRLRAFQAQHRDAAPAALERLKRAVIDDENVFAVLMDVVRVCSLGQITHALFEVGGQYRR
type: DOMAIN
name: MMCoA_mutase_a_cat
description: Methylmalonyl-CoA mutase, alpha chain, catalytic

phrase: RFVTAAALFDGHDASINIMRRILQASGVEVIHLGHNRSVDEVATAALHEDADGVAVSSYQGGHNEYFRYLVDLLRARGGERIKVFGGGGGVIVPEEI
type: DOMAIN
name: Cobalamin-bd
description: Cobalamin (vitamin B12)-binding domain

phrase: LMLDNLPGYFPFTAGVFPFRRENEDPTRMFAGEGDPQRTNRRFKLLSEGMPAKRLSTAFDSVTLYGEEPHERPDIYGKVGNSGVSVATLDDMKTLYDGFDLCAPETSVSMTINGPAPTILAMFFNVAIDQQIARTTQRQGRPLTEDELAATRRTALENVRGTVQADILKEDQGQNTCIFSTEFSLKVMGDIQAYFVEHGVRNFYSVSISGYHIAEAGANPISQLAYTLANGFTYVEAYLARGMSIDDFAPNLSFFFSNGMDPEYTVLGRVARRIWAVAMRERYGANERSQKLKYHVQTSGRSLHAQEIDFNDIRTTLQALIAIYDNCNSLHTNAFDEAITTPTEESVRRAVAIQLIINREWGLAKNQNPNQGSFVIEELTDLVEEAVLAEFDRLTERGGVLGAMETGYQRGRIQDESMLYEHRKHDGSYPIVGVNTFLSAHPHEAPQPIALARSTDDEKQSQLQRLRAFQAQHRDAAPAALERLKRAVIDDENVFAVLMDVVRVCSLGQITHALFEV
type: DOMAIN
name: MeMalonylCoA_mutase_a/b_cat
description: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic
Protein sequence:
MANPNLKQVNIQNNATFPHQQNVTRSTESPGDPKETMEAVAPSPQDPSSANSEPQEMTVDIKNFRRPGEKTFTQRCRLFVGNLPSDMADEDFKKLFFKYGDAKEVFINRDRGFGFIRLETRTLAEIAKAELDGTVLGNRPIRIRFATHGAALTVRNLSPVVSNELLEQAFSQFGPVERAIVIVDDRGRPTGKGIVEFANKPAARKALDHCADGALLLTTSPRPVILEPTEQYDDEDGLPEKLLQKSAQYHKEREHKPHFAQPGTFEFEYSSRWKALDEMDKQQREQVERNIQEAKEKLETEMEAAKQEHQLMMMRQDLMRRQEELRRLEELRNQELQKRKQIELRHEEERRRREEDMIRHREQLDIRRQPDGFKSGFMESREQDMRMNEMGTRGAINIGDSFNPVTAISGNQGPTQMMGMGGRVGAMGPDGSSKMIPDNGVMPNERFSEGGPLQMGSPVGGQTGVDSPQPQQHSPMLVGAGSVPGVLGQSGFGRGSPVGGSFDGPNNKRRRY

Annotated regions:
phrase: RLFVGNLPSDMADEDFKKLFFKYGDAKEVFINRDRGFGFIRLETRTLAEIAKAELDGTVLGNRPIRI
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: ALTVRNLSPVVSNELLEQAFSQFGPVERAIVIVDDRGRPTGKGIVEFANKPAARKALDHCADGALLLTTSPRPVIL
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: PVILEPTEQYDDEDGLPEKLLQKSAQYHKEREHKPHFAQPGTFEFEYSSRW
type: DOMAIN
name: NOPS
description: NOPS

phrase: LTVRNLSPVVSNELLEQAFSQFGPVERAIVIVDDRGRPTGKGIVEFANKPAARKALDH
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: LFVGNLPSDMADEDFKKLFFKYGDAKEVFINRDRGFGFIRLETRTLAEIAKAELDGTVLGNRPI
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: ALTVRNLSPVVSNELLEQAFSQFGPVERAIVIVDDRGRPTGKGIVEFANKPAARKALDHCADGALLLTTSPRPVILEPT
type: DOMAIN
name: PSP1_RRM2
description: PSP1, RNA recognition motif 2

phrase: CRLFVGNLPSDMADEDFKKLFFKYGDAKEVFINRDRGFGFIRLETRTLAEIAKAELDGTVLGNRPIRIRFAT
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: AALTVRNLSPVVSNELLEQAFSQFGPVERAIVIVDDRGRPTGKGIVEFANKPAARKALDHCADGALLLTTSPRPVILEPTE
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: RCRLFVGNLPSDMADEDFKKLFFKYGDAKEVFINRDRGFGFIRLETRTLAEIAKAELDGTVLGNRPIRIR
type: DOMAIN
name: PSP1_RRM1
description: PSP1, RNA recognition motif 1
Protein sequence:
MKKWLETLPPEWKKFRYRGYTLEELLAMPMDQFIKLLPARQRRSLLRGLTDAQRRLLWKIRKARQKMLQGKKVVVKTHVRDMIILPEMVGLTIAVYNGKEFIPVKITPEMIGHYLGEFSPTCKQVQHGEPGLKATRSTLHVALK

Annotated regions:
phrase: NGKEFIPVKITPEMIGHYLGEFSP
type: CONSERVED_SITE
name: Ribosomal_uS19_CS
description: Small ribosomal subunit protein uS19, conserved site
Protein sequence:
MDESKRKALENALKAIEKEFGKGAVMRLGEMPKQQVDVIPTGSLALDLALGIGGIPRGRIVEIYGPESGGKTTLALTIIAQAQRRGGVAAFVDAEHALDPLYAQRLGVQVEDLLVSQPDTGEQALEIVELLARSGAVDVIVVDSVAALVPGAEIEGEMGDQHVGLQARLMSQALRKLTAVLAKSNTAAIFINQVREKVGVTYGNPETTPGGRALKFYASVRLDVRKSGQPIKVGNEAVGVKVRVKVVKNKLAPPFREAELEIYFGRGLDPVADLVNVAVAAGVIEKAGSWFSYGELRLGQGKEKAAEALRERPELLEEIRAKVLERSDQVVLAAGEDEGE

Annotated regions:
phrase: DLVNVAVAAGVIEKAGSWFSYGELRLGQGKEKAAEALRERPELLEEIRAKVLE
type: DOMAIN
name: RecA-like_C
description: RecA-like, C-terminal

phrase: ALKFYASV
type: CONSERVED_SITE
name: DNA_recomb/repair_RecA_CS
description: DNA recombination/repair protein RecA, conserved site

phrase: GVTYGNPETTPGGRALKFYASVRLDVRKSGQPIKVGNEAVGVKVRVKVVKNKLAPPFREAELEIYFGRGLDPVA
type: DOMAIN
name: RecA_monomer-monomer_interface
description: DNA recombination and repair protein RecA, monomer-monomer interface

phrase: QVDVIPTGSLALDLALGIGGIPRGRIVEIYGPESGGKTTLALTIIAQAQRRGGVAAFVDAEHALDPLYAQRLGVQVEDLLVSQPDTGEQALEIVELLARSGAVDVIVVDSVAALVPGAEIEGEMGDQHVGLQARLMSQALRKLTAVLAKSNTAAIFINQ
type: DOMAIN
name: RecA_ATP-bd
description: DNA recombination and repair protein RecA-like, ATP-binding domain

phrase: KALENALKAIEKEFGKGAVMRLGEMPKQQVDVIPTGSLALDLALGIGGIPRGRIVEIYGPESGGKTTLALTIIAQAQRRGGVAAFVDAEHALDPLYAQRLGVQVEDLLVSQPDTGEQALEIVELLARSGAVDVIVVDSVAALVPGAEIEGEMGDQHVGLQARLMSQALRKLTAVLAKSNTAAIFINQVREKVGVTYGNPETTPGGRALKFYASVRLDVRKSGQPIKVGNEAVGVKVRVKVVKNKLAPPFREAELEIYFGRG
type: DOMAIN
name: RecA-like_N
description: RecA-like, N-terminal

phrase: RGRIVEIYGPESGGKTTLALTIIAQAQRRGGVAAFVDAEHALDPLYAQRLGVQVEDLLVSQPDTGEQALEIVELLARSGAVDVIVVDSVAALVPGAEIEGEMGDQHVGLQARLMSQALRKLTAVLAKSNTAAIFINQVREKVGVTYGNPETTPGGRALKFYASVRLDVRKS
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain
Protein sequence:
MLTAEEKAAVTGFWGKVKVDEVGAEALGRLLVVYPWTQRFFEHFGDLSSADAVMNNAKVKAHGKKVLDSFSNGMKHLDDLKGTFAQLSELHCDKLHVDPENFKLLGNVLVVVLARHHGSEFTPLLQAEFQKVVAGVANALAHRYH

Annotated regions:
phrase: LTAEEKAAVTGFWGKVKVDEVGAEALGRLLVVYPWTQRFFEHFGDLSSADAVMNNAKVKAHGKKVLDSFSNGMKHLDDLKGTFAQLSELHCDKLHVDPENFKLLGNVLVVVLARHHGSEFTPLLQAEFQKVVAGVANALAHRY
type: DOMAIN
name: Globin
description: Globin

phrase: AEALGRLLVVYPWTQRFFEHFGDLSSADAVMNNAKVKAHGKKVLDSFSNGMKHLDDLKGTFAQLSELHCDKLHVDPENFKLLGNVLVVVLARHHGSEFTPLLQAEFQKVVAGVANA
type: DOMAIN
name: Globin
description: Globin
Protein sequence:
MATNYSANQYEKAYLPTYLQNWSPARPTKEKIAAHEGYTQIIANDRGHLLPSVPRSKASPWGSFMGTWQMPLKIPPAKVTLTARTTTAADNLTKWIHKNPDLLNACNGLRPEISGKPFDPDSQTKQKKSVTKTVQQAPNPTIIPSSPVIQGDNPDEPQSSHPSAGHTPGPQTPVNSPNNPPPSPCKSTK

Annotated regions:
Protein sequence:
MDLKNKSAVILLSGGLDSSTVTGLAKASKAKIFGLSFDYGQRHKKELDSAFTIANHFEIEEFKIVKLDLSLWGGSSLTDIKKDLPIDGIQQNTIPNTYVPGRNTIFISVALSYAEAINADLIGLGVNALDYSGYPDCRPDYIKKFQELANLANKRGREENPIKLWTPLLDLNKEDIIQLAFDNNVPLEKTWSCYSGNLEPCGKCDSCRIRQTAYKKWQIKKNEN

Annotated regions:
Protein sequence:
MADFLPSRTAIVCIPNCLLSSGEIDQIRKSKEIDKSLSREKTYVKKLVKILLLGAGESGKSTFLKQMRIIHGQDFDQRAKEEFRATIYSNVIKGVRVLVDAREKLHIPWGNPENQAHGETVMAFDTRSSLMAKGMMETKVFLNFLPAIRALWQDSGIQNAYDRRREFQLGESVKYFLDNVDKLGQLDYLPSQKDILLARKPTKGIHEYEFEIKNVPFKMVDVGGQRSERKRWFECFDSVTSILFLVSSSEYDQVLMEDRQTNRLTESLNIFETIVNNRVFANVSIILFLNKTDLLEDKVKTVNIKDYFSEFTGEPHNLQDVQKFLVECFRNKRREQQQKPLYHHFTTAINTENIRLVFRDVKDTILHDNLKQLMLQ

Annotated regions:
Protein sequence:
MSDPKDSILPPLKWLSDQDPPVPTHIKDWLMELGSMTRRFENHCTYIHIKPQRECFITRDKLKEEAAHLPKSTRYWLREVILMGDNQPWLLGRTVIPQETLFEHNEALINLGDVPLGRYLFSIDKLTRDYIHIGRKDTLWARRSRLRLTGKPLLLTELFLAASPLYTTNPI

Annotated regions:
Protein sequence:
MELPVPQKLPDPPRSFDEFLKSQNWDYWPRDVHFRDSDIWEDTLKKLEEAISYTSIYSYLWTNVPRLYDIVDSLESKLKESSHLLQHHASRLFESDKMISKKRSYTNLERYKAFVKEHYRPKKIALSDRMETEKNIEGCTFLFNQNEVTQLPRHLDAKQIYLYVLKTHNFEEKVFKVWKTHVLSDCSIALLHDSFWWWFLHKFKPDKRDEDFLFDRIAESYVTLFIKIPLRRKDAFFKMYPDCLTQAVYTTFQESFPESCSLFNDKFKEDLGNTIFLWLSGLKPETGFWTHWKLQDLCTTTIHGSRRVPVKLRRSVIPSQEHIPGIRDLKIEDILKNPRAYAMPKLMKESVASKAATKPSHYRSLGPEFHKVLFDFGGQSPLILYYLKMHELGGISVTHNPKGTKFTKILREPSPAPTYCDIIRDAKRKFADNKKDFKRVKQRIKDDIKFLREQQELIDKELDRIQAKASKNLQEVKNEFENFLHKQRVEAKLKEEYGGSTSASESPQSMQSPQSSSSFPTISEDFNNVEEG

Annotated regions:
Protein sequence:
MAGHSKWANIKHRKAAQDAKRGKIFSKLIRELTVASRQGGGEVADNPRLRAAIDKALANNMTKDTIQRAIERGAGNTDGDEMEETVYEGYGPEGVAVLVECMTDNRNRTVSDVRHAFSKNGGNLGTSGSVAFMFHKQGRLTLPEGVSEETAMEATLAAEPEDIVTQADGTLEVVTSPERFGAVKDALLEADIEPVASDVGLYPDNYTSIDDVETARKVLKLFDMLEDLDDVQNVYSNADFSDAVMAELE

Annotated regions:
phrase: MEETVYEGYGPEGVAVLVECMTDNRNRTVSDVRHAFSKNGGNLGTSGSVAFMFHKQGRLTLPEGVSEETAMEATLAAEPEDIVTQADGTLEVVTSPERFGAVKDALLEADIEPVASDVGLYPDNYTSIDDVETARKVLKLFDMLEDLDDVQNVYSN
type: DOMAIN
name: TACO1_YebC-like_2nd/3rd_dom
description: TACO1/YebC-like, second and third domains

phrase: SKWANIKHRKAAQDAKRGKIFSKLIRELTVASRQGGGEVADNPRLRAAIDKALANNMTKDTIQRAIERGAG
type: DOMAIN
name: TACO1_YebC_N
description: TACO1/YebC-like, N-terminal domain
Protein sequence:
MSNSSPLRGKRIVLGVGGGIAAYKSVELMRRLMDCGAFVSPVLTKASLRFVGETTFSALGSESARTSLWDAGDPIPHTRLGQQADLVLVAPATADLIARYAAGIADELLTTTLVATNAPVVMVAAMHTEMWQHPSVVENIATLRRRGVVVIEPEIGRLAGGDIGVGRLASTGSVVEIIEEIFDGSTRALSGRKVLVTAGGTREAIDPVRYIGNRSSGKQGIAFAKAAARYGAEVTLVCTVPFESEPGINVIEVESAQEMFEAVSDAAGGFDLVVMAAAVADFRSKEISPTKIKKSHGAPQLVLEPTPDILAYLGSVKPKNQVLVGFAAETGGVEAEARRKLKDKNTDFVVANNVLEQDAGFGVDTNRVTLVFEDSALVLDLDDKRRIANRVLSFVAEWAGKNGVWSD

Annotated regions:
phrase: LSGRKVLVTAGGTREAIDPVRYIGNRSSGKQGIAFAKAAARYGAEVTLVCTVPFESEPGINVIEVESAQEMFEAVSDAAGGFDLVVMAAAVADFRSKEISPTKIKKSHGAPQLVLEPTPDILAYLGSVKPKNQVLVGFAAETGGVEAEARRKLKDKNTDFVVANNVLEQDAGFGVDTNRVTL
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal

phrase: KRIVLGVGGGIAAYKSVELMRRLMDCGAFVSPVLTKASLRFVGETTFSALGSESARTSLWDAGDPIPHTRLGQQADLVLVAPATADLIARYAAGIADELLTTTLVATNAPVVMVAAMHTEMWQHPSVVENIATLRRRGVVVIEPEIGRLAGGDIGVGRLA
type: DOMAIN
name: Flavoprotein
description: Flavoprotein
Protein sequence:
MEKIFKVTSDSGIHARPATLLVNTASKFGSDINLEYNGKNVNLKSIMGVMSLGIQQNAEIKITANGDDAAQALAAIEETMKNEGLGE

Annotated regions:
phrase: GIHARPATLLVNTASK
type: DOMAIN
name: HPr-like
description: Phosphocarrier protein HPr-like

phrase: NGKNVNLKSIMGVMS
type: DOMAIN
name: HPr-like
description: Phosphocarrier protein HPr-like

phrase: LGIQQNAEIKITANGDD
type: DOMAIN
name: HPr-like
description: Phosphocarrier protein HPr-like

phrase: FKVTSDSGIHARPATLLVNTASKFGSDINLEYNGKNVNLKSIMGVMSLGIQQNAEIKITANGDDAAQALAAIEET
type: DOMAIN
name: HPr-like
description: Phosphocarrier protein HPr-like

phrase: EKIFKVTSDSGIHARPATLLVNTASKFGSDINLEYNGKNVNLKSIMGVMSLGIQQNAEIKITANGDDAAQALAAIEETM
type: DOMAIN
name: HPr-like
description: Phosphocarrier protein HPr-like

phrase: MEKIFKVTSDSGIHARPATLLVNTASKFGSDINLEYNGKNVNLKSIMGVMSLGIQQNAEIKITANGDDAAQALAAIEETMKNEGLG
type: DOMAIN
name: HPr-like
description: Phosphocarrier protein HPr-like

phrase: GKNVNLKSIMGVMSL
type: PTM
name: PTS_HPr_Ser_P_site
description: Phosphotransferase system, HPr serine phosphorylation site

phrase: EKIFKVTSDSGIHARPATLLVNTASKFGSDINLEYNGKNVNLKSIMGVMSLGIQQNAEIKITANGDDAAQALAAIEET
type: DOMAIN
name: HPr-like
description: Phosphocarrier protein HPr-like

phrase: GIHARPA
type: PTM
name: PTS_HPr_His_P_site
description: Phosphotransferase system, HPr histidine phosphorylation site
Protein sequence:
MSGLPRVGTGVDVHQLVAGRPCWVAGLLWEGEAAGPEGHSDGDVAAHACCDALFAAAGLGDLGAHFGTARPEFAGASGARLLAEAARLVREAGFEIGNVSVQVVGNRPKVGRRRAEAQAALSRACGAPVSVAGTTTDALGLTGRGEGIAAIATALVVPR

Annotated regions:
phrase: RVGTGVDVHQLVAGRPCWVAGLLWEGEAAGPEGHSDGDVAAHACCDALFAAAGLGDLGAHFGTARPEFAGASGARLLAEAARLVREAGFEIGNVSVQVVGNRPKVGRRRAEAQAALSRACGAPVSVAGTTTDALGLTGRGEGIAAIATALV
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RVGTGVDVHQLVAGRPCWVAGLLWEGEAAGPEGHSDGDVAAHACCDALFAAAGLGDLGAHFGTARPEFAGASGARLLAEAARLVREAGFEIGNVSVQVVGNRPKVGRRRAEAQAALSRACGAPVSVAGTTTDALGLTGRGEGIAAIATAL
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: SDGDVAAHACCDALF
type: CONSERVED_SITE
name: MECDP_synthase_CS
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site

phrase: RVGTGVDVHQLVAGRPCWVAGLLWEGEAAGPEGHSDGDVAAHACCDALFAAAGLGDLGAHFGTARPEFAGASGARLLAEAARLVREAGFEIGNVSVQVVGNRPKVGRRRAEAQAALSRACGAPVSVAGTTTDALGLTGRGEGIAAIATALV
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: PRVGTGVDVHQLVAGRPCWVAGLLWEGEAAGPEGHSDGDVAAHACCDALFAAAGLGDLGAHFGTARPEFAGASGARLLAEAARLVREAGFEIGNVSVQVVGNRPKVGRRRAEAQAALSRACGAPVSVAGTTTDALGLTGRGEGIAAIATALVV
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RVGTGVDVHQLVAGRPCWVAGLLWEGEAAGPEGHSDGDVAAHACCDALFAAAGLGDLGAHFGTARPEFAGASGARLLAEAARLVREAGFEIGNVSVQVVGNRPKVGRRRAEAQAALSRACGAPVSVAGTTTDALGLTGRGEGIAAIATAL
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Protein sequence:
MTFKNKLKFYVITDRKYSCEVYSVEQALKGGATAVQLRMKSSNTREMVEVGQKIRKLTLEYDALFFVNDRLDIAQAVKSDGIHVGIDDISISKIKEIAPELIIGASAYNINEMKIAESEGADYLGVGSVYPTNTKLDARYLGLNGLKELSNCSNLPVVAIGGINHENVKEVLMCGVSGVAVVSAIVGANDIIFSAKKMNEIIKKYI

Annotated regions:
phrase: FYVITDRKYSCEVYSVEQALKGGATAVQLRMKSSNTREMVEVGQKIRKLTLEYDALFFVNDRLDIAQAVKSDGIHVGIDDISISKIKEIAPELIIGASAYNINEMKIAESEGADYLGVGSVYPTNTKLDARYLGLNGLKELSNCSNLPVVAIGGINHENVKEVLMCGVSGVAVVSAIVGANDIIFSAKKMN
type: DOMAIN
name: ThiamineP_synth_TenI
description: Thiamine phosphate synthase/TenI

phrase: YVITDRKYSCEVYSVEQALKGGATAVQLRMKSSNTREMVEVGQKIRKLTLEYDALFFVNDRLDIAQAVKSDGIHVGIDDISISKIKEIAPELIIGASAYNINEMKIAESEGADYLGVGSVYPTNTKLDARYLGLNGLKELSNCSNLPVVAIGGINHENVKEVLMCGVSGVAVVSA
type: DOMAIN
name: ThiamineP_synth_TenI
description: Thiamine phosphate synthase/TenI
Protein sequence:
MDQTLSEFGNVFVFFLLGVVFVAGGYLTARMLRPSRPNPVKTSTYECGEEAVGSAWVKFNIRFYVVALIFIIFDVEVVFLFPWATVFRQLGSFALVEALVFAGILILGLVYAWVKGDLDWVRPTPSVPKMPEMPASKSSSQRD

Annotated regions:
Protein sequence:
MLRSHAAGLLREGDAGQQVTLAGWVARRRDHGGVIFIDLRDASGIAQVVFRDPQDTEVLAQAHRLRAEFCVSVAGVVEIRPEGNANPEIATGEIEVNATSLTVLGECAPLPFQLDEPAGEELRLKYRYLDLRRDDPAAAIRLRSRVNAAARAVLARHDFVEIETPTITRSTPEGARDFLVPARLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLDMEMSFVDAEDIIAISEEVLTELWALIGYRIPTPIPRIGYAEAMRRFGTDKPDLRFGLELVECTDFFSDTTFRVFQAPYVGAVVMPGGASQPRRTLDGWQDWAKQRGHRGLAYVLVAEDGTLGGPVAKNLTEAERTGLADHVGAKPGDCIFFSAGPVKSSRALLGAARVEIANRLGLIDPDAWAFVWVVDPPLFEPADEATAAGEVAVGSGAWTAVHHAFTAPKPEWEDRIESDTGSVLADAYDIVCNGHEIGGGSVRIHRRDIQERVFAVMGLDKAEAEEKFGFLLEAFMFGAPPHGGIAFGWDRTTALLAGMDSIREVIAFPKTGGGVDPLTDAPAPITAQQRKESGIDAQPKRVQQA

Annotated regions:
phrase: EELRLKYRYLDLRRDDPAAAIRLRSRVNAAARAVLARHDFVEIETPTITRSTPEGARDFLVPARLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLDMEMSFVDAEDIIAISEEVLTELWALIGYRIPTPIPRIGYAEAMRRFGTDKPDLRFGLELVECTDFFSDTTFRVFQAPYVGAVVMPGGASQPRRTLDGWQDWAKQRGHRGLAYVLVAEDGTLGGPVAKNLTEAERTGLADHVGAKPGDCIFFSAGPVKSSRALLGAARVEIANRLGLIDPDAWAFVWVVDPPLFEPADEATAAGEVAVGSGAWTAVHHAFTAPKPEWEDRIESDTGSVLADAYDIVCNGHEIGGGSVRIHRRDIQERVFAVMGLDKAEAEEKFGFLLEAFMFGAPPHGGIAFGWDRTTALLAGMDSIREVIAFPK
type: DOMAIN
name: Aa-tRNA-synt_II
description: Aminoacyl-tRNA synthetase, class II (D/K/N)

phrase: YVGAVVMPGGASQPRRTLDGWQDWAKQRGHRGLAYVLVAEDGTLGGPVAKNLTEAERTGLADHVGAKPGDCIFFSAGPVK
type: DOMAIN
name: GAD_dom
description: GAD domain

phrase: IRLRSRVNAAARAVLARHDFVEIETPTITRSTPEGARDFLVPARLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLDMEMSFVDAEDIIAISEEVLTELWALIGYRIPTPIPRIGYAEAMRRFGTDKPDLRFGLELVECTDFFSDTTFRVFQAPYVGAVVMPGGASQPRRTLDGWQDWAKQRGHRGLAYVLVAEDGTLGGPVAKNLTEAERTGLADHVGAKPGDCIFFSAGPVKSSRALLGAARVEIANRLGLIDPDAWAFVWVVDPPLFEPADEATAAGEVAVGSGAWTAVHHAFTAPKPEWEDRIESDTGSVLADAYDIVCNGHEIGGGSVRIHRRDIQERVFAVMGLDKAEAEEKFGFLLEAFMFGAPPHGGIAFGWDRTTALLAGMDSIREVIAFPKT
type: DOMAIN
name: AspRS_core
description: Aspartate-tRNA ligase, type 1, core domain

phrase: RSHAAGLLREGDAGQQVTLAGWVARRRDHGGVIFIDLRDASGIAQVVFRDPQDTEVLAQAHRLRAEFCVSVAGVVEIRPEGNANPEIATGEIEVNATSLTVLGECAPLPFQLDEPAGEELRLKYRYLDLRRD
type: DOMAIN
name: Asp-tRNA-ligase_1_N
description: Aspartate-tRNA ligase, type 1, anticodon recognition domain

phrase: IRLRSRVNAAARAVLARHDFVEIETPTITRSTPEGARDFLVPARLHPGSFYALPQSPQLFKQLLMVAGMERYYQIARCYRDEDFRADRQPEFTQLDMEMSFVDAEDIIAISEEVLTELWALIGYRIPTPIPRIGYAEAMRRFGTDKPDLRFGLELVECTDFFSDTTFRVFQAPYVGAVVMPGGASQPRRTLDGWQDWAKQRGHRGLAYVLVAEDGTLGGPVAKNLTEAERTGLADHVGAKPGDCIFFSAGPVKSSRALLGAARVEIANRLGLIDPDAWAFVWVVDPPLFEPADEATAAGEVAVGSGAWTAVHHAFTAPKPEWEDRIESDTGSVLADAYDIVCNGHEIGGGSVRIHRRDIQERVFAVMGLDKAEAEEKFGFLLEAFMFGAPPHGGIAFGWDRTTALLAGMDSIREVIAF
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: VTLAGWVARRRDHGGVIFIDLRDASGIAQVVFRDPQDTEVLAQAHRLRAEFCVSVAGVVEIRPEGNANPEIATGEIEVNATSLTV
type: DOMAIN
name: NA-bd_OB_tRNA
description: OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
Protein sequence:
MKKQLYQLSNTDIAFPPIECALDSPDGLLAIGGDLSLARLSNAYNNGIFPWFSEDEPIMWWSPSERGIVELDNFHISKSLRKHLKKHPVTVTINNAFIEVIEACCEQRIDTDGTWITSDMLTAYINAHNAGIAHSVEVWREGELAGGLYGIMQNGVFCGESMFHHQTNCSKLAMWALVNWLKRHNAHFIDCQLENPYLMSLGATVIPRPAFLAKLHAAQNYKVDPAMWIPQELNAIYE

Annotated regions:
Protein sequence:
MQRLVEVESVSFEEDNNEISLRPSNWDDYIGQEKIKKNLRVFIDASKKRKEALDHILFYGPPGLGKTTLSYLISNEMNTNIKVTAGPMIEKSGDLAAILTNLEEGDILFIDEIHRLSPAVEEILYPAMEDYRLDIIIGSGPAAQTVKIDLPRFTLIGATTRAGMLSNPLRERFGMHFRMQFYTEIELAKIIQKASLKLGKNCEDDASLEISKRSRGTPRVALRLLRRVRDFSEVENEKSIHLQRCKYALDELGVNESGFDEMDINLLELLISNRGKPMGLSTIAAALSEDEGTIEDAIEPYLLANGYIERTARGRVASVKTYEMFRLSYPTSLKLEDDLTQGKLF

Annotated regions:
phrase: ESGFDEMDINLLELLISNRGKPMGLSTIAAALSEDEGTIEDAIEPYLLANGYIERTARGRVASVKTYEM
type: DOMAIN
name: RuvB_C
description: RuvB C-terminal winged helix domain

phrase: LRPSNWDDYIGQEKIKKNLRVFIDASKKRKEALDHILFYGPPGLGKTTLSYLISNEMNTNIKVTAGPMIEKSGDLAAILTNLEEGDILFIDEIHRLSPAVEEILYPAMEDYRLDIIIGSGPAAQTVKIDLPRFTLIGATTRAGMLSNPLRERFGMHFR
type: DOMAIN
name: RuvB-like_N
description: RuvB-like P-loop domain

phrase: ALDHILFYGPPGLGKTTLSYLISNEMNTNIKVTAGPMIEKSGDLAAILTNLEEGDILFIDEIHRLSPAVEEILYPAMEDYRLDIIIGSGPAAQTVKIDLPRFTLIGATTRAGMLSNPLRERFGMHFRMQFYTEIE
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: YTEIELAKIIQKASLKLGKNCEDDASLEISKRSRGTPRVALRLLRRVRDFSEVENEKSIHLQRCKYALDELGV
type: DOMAIN
name: AAA_lid_4
description: RuvB, AAA lid domain
Protein sequence:
MIEASKLKAGMTFETTDGKLIRVLEASHHKPGKGNTVMRMKLRDVRTGSTFDTTYRPEEKFEQAIIETRPAQYLYQMDDTAYFMDTENYEQYEIPIVNIENELKFILENSEVKIQFYGSEVIGVTIPTTVELVVTDTQPSIKGATVTGSGKPATLETGLVVNVPDFIEVGQKLVINTAEGTYVSRA

Annotated regions:
phrase: VELVVTDTQPSIKGATVTGSGKPATLETGLVVNVPDFIEVGQKLVINTAEGTYVS
type: DOMAIN
name: Elong-fact-P_C
description: Elongation factor P, C-terminal

phrase: ETRPAQYLYQMDDTAYFMDTENYEQYEIPIVNIENELKFILENSEVKIQFYGSEVIGVTI
type: DOMAIN
name: Transl_elong_P/YeiP_cen
description: Translation elongation factor P/YeiP, central

phrase: TRPAQYLYQMDDTAYFMDTENYEQYEIPIVNIENELKFILENSEVKIQFYGSEV
type: DOMAIN
name: Transl_elong_P/YeiP_cen
description: Translation elongation factor P/YeiP, central

phrase: VELVVTDTQPSIKGATVTGSGKPATLETGLVVNVPDFIEVGQKLVINTAEGTYVS
type: DOMAIN
name: Elong-fact-P_C
description: Elongation factor P, C-terminal

phrase: VELVVTDTQPSIKGATVTGSGKPATLETGLVVNVPDFIEVGQKLVINTAEGTYVS
type: DOMAIN
name: Elong-fact-P_C
description: Elongation factor P, C-terminal

phrase: RPAQYLYQMDDTAYFMDTENYEQYEIPIVNIENELKFILENSEVKIQFYGSEV
type: DOMAIN
name: Transl_elong_P/YeiP_cen
description: Translation elongation factor P/YeiP, central

phrase: EASKLKAGMTFETTDGKLIRVLEASHHKPGKGNTVMRMKLRDVRTGSTFDTTYRPEEK
type: DOMAIN
name: Transl_elong_KOW-like
description: Translation elongation factor, KOW-like

phrase: KPATLETGLVVNVPDFIEV
type: CONSERVED_SITE
name: Transl_elong_P/YeiP_CS
description: Translation elongation factor P/YeiP, conserved site
Protein sequence:
MKKSVNLLSGGTDSATVLAIASEMCYEIYAMSFNYGQRNNAELRKVKELIKKYNVKQHKIVDIDLRAFGGSALTDDNIDVPYYHGINALPEIVPVTYVPARNTIFLSYAVGFAEVIGSQDIFIGVHTSDSANYPDCCPEYIQSFEKMVNLATNMGVQGKKITIHAPLIDMTKEQIIRTGLKLGVDYKNTISCYSPTEDDLSCGNCLACIIRLDAFKKNNIQDPIKYV

Annotated regions:
Protein sequence:
MAQLETRTEPMVVNFGPHHPSMHGVLRLVVTLDGENVIDCEPVIGYLHRGMEKIAENRTNVMYVPYVSRMDYAAGMFYEAIVVNAPERLANISVPKRASYIRVLMLELNRIANHLLWLGPFLADVGAQTPFFYIFREREMIYDLWEAATGQRLINNNFFRIGGVACDLPYGWLEKCIDFCDWFAPKIDEYEKLITNNPIFKKRIEGLGTIERDQAINWSLSGPMLRASGVSWDLRKVDNYECYDDFDWKIASEKEGDCYARYRVRVEEMRQSLKIIRQACEMIPGGPTENLEAKRMATDDKKSDIFGIDYQYVAKKVAPTFKIPNGELYTRLESGKGEIGVFIQGNNEVTPWRFKIRAADLNNLQILPHILKGAKIADIMAILGSIDVIMGSVDR

Annotated regions:
phrase: LHRGMEKIAEN
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_49kDa_CS
description: NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site

phrase: DVGAQTPFFYIFREREMIYDLWEAATGQRLINNNFFRIGGVACDLPYGWLEKCIDFCDWFAPKIDEYEKLITNNPIFKKRIEGLGTIERDQAINWSLSGPMLRASGVSWDLRKVDNYECYDDFDWKIASEKEGDCYARYRVRVEEMRQSLKIIRQACEMIPGGPTENLEAKRMATDDKKSDIFGIDYQYVAKKVAPTFKIPNGELYTRLESGKGEIGVFIQGNNEVTPWRFKIRAADLNNLQILPHILKGAKIADIMAILGSIDVIMGSVD
type: DOMAIN
name: NADH_Q_OxRdtase_suD
description: NADH-quinone oxidoreductase, subunit D
Protein sequence:
MTELCPVYAPFFGAIGCASAIIFTSLGAAYGTAKSGVGICATCVLRPDLLFKNIVPVIMAGIIAIYGLVVSVLVCYSLGQKQALYTGFIQLGAGLSVGLSGLAAGFAIGIVGDAGVRGSSQQPRLFVGMILILIFAEVLGLYGLIVALLLNSRATQDVVC

Annotated regions:
phrase: LGAGLSVGLSGLAAGFAIGIVGDAGVRGSSQQPRLFVGMILILIFAEVLGLYGLIVALL
type: DOMAIN
name: ATPase_proteolipid_c-like_dom
description: V-ATPase proteolipid subunit C-like domain

phrase: IGCASAIIFTSLGAAYGTAKSGVGICATCVLRPDLLFKNIVPVIMAGIIAIYGLVVSV
type: DOMAIN
name: ATPase_proteolipid_c-like_dom
description: V-ATPase proteolipid subunit C-like domain
Protein sequence:
MQSKTLQNWLHLQRIVRFGDTDAAGVIHFHQLLRWSHEAWEESLDRYGLKAVDVFPSSLGISTSTSVALPIVHCEADFFLPIGIGDKLNVQLVPVRLNIGSFEVQFTFQRREQNVAVALVRHRSIDSDSRRLCDLPEGIDRWLEASSLHRGVSAI

Annotated regions:
Protein sequence:
MTMRTSSLLLAAVAVVAIVAGATAATVGSWEPVDINDPHVQELGRWAVAEEDRGVAAGGLTFERVTDGEKQVVAGVNYRLTLEASSSGAKDGRYEAVVYEQDPRSNARKLVSFEPIH

Annotated regions:
phrase: DINDPHVQELGRWAVAEEDRGVAAGGLTFERVTDGEKQVVAGVNYRLTLEASSSGAKDGRYEAVVYEQDPRSNARKLVSFE
type: DOMAIN
name: Cystatin_dom
description: Cystatin domain

phrase: GSWEPVDINDPHVQELGRWAVAEEDRGVAAGGLTFERVTDGEKQVVAGVNYRLTLEASSSGAKDGRYEAVVYEQDPRSNARKLVSFE
type: DOMAIN
name: Cystatin_dom
description: Cystatin domain

phrase: KQVVAGVNYRLTL
type: CONSERVED_SITE
name: Prot_inh_cystat_CS
description: Proteinase inhibitor I25, cystatin, conserved site

phrase: ATVGSWEPVDINDPHVQELGRWAVAEEDRGVAAGGLTFERVTDGEKQVVAGVNYRLTLEASSSGAKDGRYEAVVYEQDPRSNARKLVSFEP
type: DOMAIN
name: Cystatin_dom
description: Cystatin domain
Protein sequence:
MNYLNKIRIENPLTICYTNDVVKNFTANGLLSIGASPAMSEAPEEAEEFYKVAQALLINIGTLTAQNEQDIIAIAQTANEAGLPIVFDPVAVGASTYRKQFCKLLLKSAKVSVIKGNASEILALIDDTATMKGTDSDANLDAVAIAKKAYAIYKTAIVITGKEDVIVQDNKAIVLANGSPLLARVTGAGCLLGGVIAGFLFRETEPDIEALIEAVSVFNIAAEVAAENENCGGPGTFSPLLLDTLYHLNETTYQQRIRIQEVE

Annotated regions:
Protein sequence:
MFDIGWTELLVIAVVLIVVVGPKDLPPMLRAFGKMTQRARKVAGDFRAQFDEALREAELDDVRQTISDAQKLNPVNSLREAMNPLRQMGNEIKADLQKATTVTENKTEVPPDAVAAPTPSMSLPETPPLVATPAPSEPVAAAVVQADTVAAKPKAVRKPRGKIADKVDAAAAVAVPVEKPKRTTAVRKPATLKKPAQTKKDEA

Annotated regions:
Protein sequence:
MLVMLQFSKYQGLGNDFLLIDGREDQLTQQVINPDPAWVRKICDRHFGIGADGLILALPPRADGDLRMQIFNADGSLAEMCGNGIRCLTRFLADIEGDLCVQRWNIETLAGIICPVLQEDGQICVDMGTPFLDPESIPTTLTIGSAGLPQGECHLGSTSLHVAAVGMGNPHLIVPVEDLENIPFENWGQRLEKHHAFPAKTNVHFLKIHSPNQLEIRVWERGSGPTLACGTGACASLVATCLLGLSDDHAEVLLPGGVLQISWPGRRGSVFMTGPAEPIFDGVLTPLLSPSHAEVLPQDDQII

Annotated regions:
phrase: NADGSLAEMCGNGI
type: ACTIVE_SITE
name: DAP_epimerase_AS
description: Diaminopimelate epimerase, active site