nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MPQKTKETPMMAQYQKVKDQYPDAFLFYRLGDFYELFNDDAVKASQLLELTLTARNKNAADPIPMCGVPHHAAQNYIDILVDQGYKVAICEQMEDPKTAKGMVKREVVQLVTPGTVMDEKAGHAKQNNYLTAVVAQGDQFGFAYTDLSTGEMKVSQISSLDVLLNEMLSLQTKEVVVNHDVPSEVVQAFVQQQILVSYQDEGADTAEVSFVSQNISQPLALAVIKQLVVYLATTQKRHLGHLQRAQAYEPSQYLKLDHSAKMNLELTASLRTGHKSGTLLWLLDETKTAMGGRLLKQWLERPLLDLNQIKNRQNQVASFLQHYFERTNLQEALTKVYDLERLAGRVAFGSVNGRDLIQLKTSLEQIPKIKDVLTGINETQAFDQALTRLDPVDDVRTLIETAINPDSPISVTDGGIIQDGYDEQLDQYRNAMSNGKQWLAQLEAQEREATGIHNLKIGFNRVFGYYIEVTRANLSSLPEGRYERKQTLTNAERFITPELKEKEQLILEAEERSTALEYELFTQVREQVKLQIERLQTLAKGVAALDVLQSFAVVSESYHYVQPTLRTDSREIDLVDGRHPVVEKVLGRQKYIPNAVQMGKETDMLLITGPNMSGKSTYMRQLALTVIMAQMGCFVPAKSANLPVFDQIFTRIGAADDLISGQSTFMVEMMEANRAIMSATANSLILFDEIGRGTATYDGMALAQAIIEYIHDHVHAKTLFSTHYHELTALADTLTALRNVHVGAVEENGELVFLHKMLAGPADKSYGI

Annotated regions:
phrase: TPMMAQYQKVKDQYPDAFLFYRLGDFYELFNDDAVKASQLLELTLTARNKNAADPIPMCGVPHHAAQNYIDILVDQGYKVAICEQMEDPKTAKGMVKREVVQLVTPGTVMD
type: DOMAIN
name: DNA_mismatch_repair_MutS-lik_N
description: DNA mismatch repair protein MutS-like, N-terminal

phrase: GYDEQLDQYRNAMSNGKQWLAQLEAQEREATGIHNLKIGFNRVFGYYIEVTRANLSSLPEGRYERKQTLTNAERFITPELKEKEQLILEAEE
type: DOMAIN
name: DNA_mismatch_repair_MutS_clamp
description: DNA mismatch repair protein MutS, clamp

phrase: MNLELTASLRTGHKSGTLLWLLDETKTAMGGRLLKQWLERPLLDLNQIKNRQNQVASFLQHYFERTNLQEALTKVYDLERLAGRVAFGSVNGRDLIQLKTSLEQIPKIKDVLTGINETQAFDQALTRLDPVDDVRTLIETAINPDSPISVTDGGIIQDGYDEQLDQYRNAMSNGKQWLAQLEAQEREATGIHNLKIGFNRVFGYYIEVTRANLSSLPEGRYERKQTLTNAERFITPELKEKEQLILEAEERSTALEYELFTQVREQVKLQIERLQTLAKGVAALDVLQSF
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: NYLTAVVAQGDQFGFAYTDLSTGEMKVSQISSLDVLLNEMLSLQTKEVVVNHDVPSEVVQAFVQQQILVSYQDEGADTAEVSFVSQNISQPLALAVIKQLVVYLATTQKRHLGHL
type: DOMAIN
name: DNA_mmatch_repair_MutS_con_dom
description: DNA mismatch repair protein MutS, connector domain

phrase: HKSGTLLWLLDETKTAMGGRLLKQWLERPLLDLNQIKNRQNQVASFLQHYFERTNLQEALTKVYDLERLAGRVAFGSVNGRDLIQLKTSLEQIPKIKDVLTGINETQAFDQALTRLDPVDDVRTLIETAINPDSPISVTDGGIIQDGYDEQLDQYRNAMSNGKQWLAQLEAQEREATGIHNLKIGFNRVFGYYIEVTRANLSSLPEGRYERKQTLTNAERFITPELKEKEQLILEAEERSTALEYELFTQVREQVKLQIERLQTLAKGVAALDVLQSFAVVSESYHYVQPTLRTDSREIDLVDGRHPVVEK
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: SLILFDEIGRGTATYD
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: TDMLLITGPNMSGKSTYMRQLALTVIMAQMGCFVPAKSANLPVFDQIFTRIGAADDLISGQSTFMVEMMEANRAIMSATANSLILFDEIGRGTATYDGMALAQAIIEYIHDHVHAKTLFSTHYHELTALADTLTALRNVHVGAVEENGELVFLHKMLAGPADKSYG
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: LITGPNMSGKSTYMRQLALTVIMAQMGCFVPAKSANLPVFDQIFTRIGAADDLISGQSTFMVEMMEANRAIMSATANSLILFDEIGRGTATYDGMALAQAIIEYIHDHVHAKTLFSTHYHELTALADTLTALRNVHVGAVEENGELVFLHKMLAGPADKSYG
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal
Protein sequence:
MSNERTAQQSDIKQLISKGLEQGYLTYAEVNDHLPEDLVDPDQIEDIIGMINGMGIEVHEVAPDAETLLLNEGNTGNREVDDTAAEEAAAALSALDTEAGRTTDPVRMYMREMGTVELLTREGEIAIAKRIEEGLSEVQAALGVFPLSTELLLSEYELHKEGKRRLTEVVVGFNDLIEEDNSVTSSVDVTDESIVEVDEEDDDSVGNDEDAPTIGPDPAEVASRIESLSTEYAKFKKLYAKHGPEHKAVIKVREDVAAIFVTFKLSLPLTDLLVQQLQNMVNSVKDHERKVLHLATNVAKMPRKDFIRSWENNQTNLEWVEDAIKRKQKWSSALRDIKDQITAEQQASIDLEKANSLTLADIKEINRMMVYGEAKASKAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVCKFEHRRGFKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQQFGREATPEELAKEMDMPEDKIRKVMKIAKEPISMETPIGDDEDSHLGDFIEDPNVESPVDTTTNVNLSETVREVLAGLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEQLRSFLDID

Annotated regions:
phrase: FPLSTELLLSEYELHKEGKRRLTEVVVGFNDLIEEDNSVTSSVDVTDESIVEVDEEDDDSVGNDEDAPTIGPDPAEVASRIESLSTEYAKFKKLYAKHGPEHKAVIKVREDVAAIFVTFKLSLPLTDLLVQQLQNMVNSVKDHERKVLHLATNVAKMPRKDFIRSWENNQTNLEWVEDAIKRKQKWSSALRDIKDQITAEQQASIDL
type: DOMAIN
name: RNA_pol_sigma_70_non-ess
description: RNA polymerase sigma factor 70, non-essential domain

phrase: ETINKLNRISRQMLQQFGREATPEELAKEMDMPEDKIRKVMKIAKEPISMETPIGDDEDSHLGDFIEDPNVESPV
type: DOMAIN
name: RNA_pol_sigma70_r3
description: RNA polymerase sigma-70 region 3

phrase: VLAGLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLR
type: DOMAIN
name: RNA_pol_sigma70_r4
description: RNA polymerase sigma-70 region 4

phrase: AKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVCKFEHRRGFKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQQFGREATPEELAKEMDMPEDKIRKVMKIAKEPISMETPIGDDEDSHLGDFIEDPNVESPVDTTTNVNLSETVREVLAGLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEQLRSF
type: DOMAIN
name: RNA_pol_sigma_RpoD_C
description: RNA polymerase sigma factor RpoD, C-terminal

phrase: AQQSDIKQLISKGLEQGYLTYAEVNDHLPEDLVDPDQIEDIIGMINGMGIEVHEVAPDAETLLLNEGNTGNREVDDTAAE
type: DOMAIN
name: RNA_pol_sigma_70_r1_1
description: RNA polymerase sigma factor 70, region 1.1

phrase: DLIQEGNIGLMKA
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: TLEEVGKQFDVTRERIRQIEAKALRK
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: DPVRMYMREMGTVELLTREGEIAIAKRIEEG
type: DOMAIN
name: RNA_pol_sigma70_r1_2
description: RNA polymerase sigma-70 region 1.2

phrase: MVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVCKFEHRRGFKFSTYATWWIRQAITRSIADQAR
type: DOMAIN
name: RNA_pol_sigma70_r2
description: RNA polymerase sigma-70 region 2

phrase: DLIQEGNIGLMKA
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: FSTYATWW
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: LTPREAKVLRMR
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: TLEEVGKQFDVTRER
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: IRQIEAKALRK
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: AKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVCKFEHRRGFKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQQFGREATPEELAKEMDMPEDKIRKVMKIAKEPISMETPIGDDEDSHLGDFIEDPNVESPVDTTTNVNLSETVREVLAGLTPREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLR
type: DOMAIN
name: RNA_pol_sigma-70_dom
description: RNA polymerase sigma-70-like domain
Protein sequence:
MALAVLRVLEPFPTETPPLAVLLPPGGPWPAAELGLVLALRPAGESPAGPALLVAALEGPDAGTEEQGPGPPQLLVSRALLRLLALGSGAWVRARAVRRPPALGWALLGTSLGPGLGPRVGPLLVRRGETLPVPGPRVLETRPALQGLLGPGTRLAVTELRGRARLCPESGDSSRPPPPPVVSSFAVSGTVRRLQGVLGGTGDSLGVSRSCLRGLGLFQGEWVWVAQARESSNTSQPHLARVQVLEPRWDLSDRLGPGSGPLGEPLADGLALVPATLAFNLGCDPLEMGELRIQRYLEGSIAPEDKGSCSLLPGPPFARELHIEIVSSPHYSTNGNYDGVLYRHFQIPRVVQEGDVLCVPTIGQVEILEGSPEKLPRWREMFFKVKKTVGEAPDGPASAYLADTTHTSLYMVGSTLSPVPWLPSEESTLWSSLSPPGLEALVSELCAVLKPRLQPGGALLTGTSSVLLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQAIFSRARRCRPAVLLLTAVDLLGRDRDGLGEDARVMAVLRHLLLNEDPLNSCPPLMVVATTSRAQDLPADVQTAFPHELEVPALSEGQRLSILRALTAHLPLGQEVNLAQLARRCAGFVVGDLYALLTHSSRAACTRIKNSGLAGGLTEEDEGELCAAGFPLLAEDFGQALEQLQTAHSQAVGAPKIPSVSWHDVGGLQEVKKEILETIQLPLEHPELLSLGLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANEDRASQLRVLSAITRKFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVHDLEEGLEPGSSALMLTMEDLLQAAARLQPSVSEQELLRYKRIQRKFAAC

Annotated regions:
phrase: GTSSVLLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQAIFSRARRCRPAVLLLTAVDLLGRDRDGLGEDARVMAVLRHLLLNEDPLNSCPPLMVVATTSRAQDLPADVQTAFPHELEVPAL
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: RRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGAN
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VFVIGATNRPDLLDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: VKKEILETIQLPLEHPELLSLGLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVF
type: DOMAIN
name: RecA-like_PEX6_r2
description: Peroxisomal biogenesis factor 6, second ATPase domain

phrase: VLLRGPPGCGKTTVVAAACSHLGLHLLKVPCSSLCAESSGAVETKLQAIFSRARRCRPAVLLLTAVDLLGRDRDGLGEDARVMAVLRHLLLNEDPLNSCPPLMVVATTSRAQDLPADVQTAFPHELEV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: LLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core
Protein sequence:
MGSKRKKAEKQKDFVKAKLRVGKTAAKPDNHTDTSFIAKSISIPNQTINKKTSNTEKKYEVDLAHHLSLTKHHSDVTRKEVLNYIEQHLPSNPSLYKDILTSIVPLIIDQSQNVRNALTSLLSACATQQVGLLDLHIRSIILFIHSAMSHIKPDIRNSSTKFLSVLIDHATESLVRSYFIKTLKSYFTLLSWTLTNDKKAVSLAITTSSSIGGPSKKARIHHLSILRAFLSAALFPISSNERKLDYSKIKMIHPESYKYLLASSTQPFASLKLFVQEVPKQKNTDIQQNTKKDDNAFSLNDLDTVSTEDIDTRRKVMLDVFMAPMLRNLKNLIKEGGEVGREAHSCMKVLEQLQSETK

Annotated regions:
phrase: LDLHIRSIILFIHSAMSHIKPDIRNSSTKFLSVLIDHATESLVRSYFIKTLKSYFTLLSWTLTNDKKAVSLAITTSSSIGGPSKKARIHHLSILRAF
type: DOMAIN
name: Ipi1_N
description: Pre-rRNA-processing protein Ipi1, N-terminal
Protein sequence:
MTQFTKLEASSRAKAGKGAARATRRDGQVPAVIYGAKQEPTLVALDPRLVVREMQRGGWRSRVYDVTVDGASSPALMREIQLHPVSDKPIHVDFQRLAAGERVHVEVRIVFTGEDKSPGIKRGGVLNIVRHTVEVSADPANIPESFTVDLSQLDIHDNVRWDDLQGTGSVTPTLQIPNFVIATVAAPSADETPEPAAAPAAAPAKK

Annotated regions:
phrase: RRDGQVPAVIYGAKQEPTLVALDPRLVVREMQRGGWRSRVYDVTVDGASSPALMREIQLHPVSDKPIHVDFQ
type: DOMAIN
name: Ribosomal_L25_dom
description: Large ribosomal subunit protein bL25, L25 domain

phrase: VHVEVRIVFTGEDKSPGIKRGGVLNIVRHTVEVSADPANIPESFTVDLSQLDIHDNVRWDDLQGTGSVTPTLQIPNFVIATVAA
type: DOMAIN
name: Ribosomal_bL25_b-dom
description: Large ribosomal subunit protein bL25, beta domain

phrase: LEASSRAKAGKGAARATRRDGQVPAVIYGAKQEPTLVALDPRLVVREMQRGGWRSRVYDVTVDGASSPALMREIQLHPVSDKPIHVD
type: DOMAIN
name: Ribosomal_L25_dom
description: Large ribosomal subunit protein bL25, L25 domain
Protein sequence:
GFGDLKSPAGLQVLNDYLADKSYIEGYVPSQADVAVFEAVSXPPPAXLXXXXXWYNHIKXYEKEKASLPGVKKALGKYGPANVEDTTESGATDSKDDDDIDLFXXXXXXXXXXAKXLREERLAQYESKKAKKPALVAKSXXXXXVKPWDDEXXMAKLEEXVXSIQADGLVXXXXXLVPVGYGIKXXXXXXXXXDDKVGTDMLEEQITAFEDYVQSMDVAAFNKI

Annotated regions:
phrase: KSXXXXXVKPWDDEXXMAKLEEXVXSIQADGLVXXXXXLVPVGYGIKXXXXXXXXXDDKVGTDMLEEQITAFEDYVQSMDVAAFNK
type: DOMAIN
name: EF1B_bsu/dsu_GNE
description: Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain

phrase: VAKSXXXXXVKPWDDEXXMAKLEEXVXSIQADGLVXXXXXLVPVGYGIKXXXXXXXXXDDKVGTDMLEEQITAFEDYVQSMDVAAFNK
type: DOMAIN
name: EF1B_bsu/dsu_GNE
description: Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain

phrase: XVKPWDDEXXMAKLEEXVXSIQADGLVXXXXXLVPVGYGIKXXXXXXXXXDDKVGTDMLEEQITAFEDYVQSMDVAAFNK
type: DOMAIN
name: EF1B_bsu/dsu_GNE
description: Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain

phrase: VQSMDVAAFNK
type: CONSERVED_SITE
name: Transl_elong_EF1B_B/D_CS
description: Translation elongation factor EF1B, beta/delta chains, conserved site
Protein sequence:
DIFVDKDPLKVESLTKAAMQFGSAVLVKPPRRMPLSMCYEWGVFPQGYAMGLFRRRCQCLTGRCLTNYHVAYQLFNITPDGVCLGNGVFIGWFVPTDAIPLYAHKWLQPWFIYLRKSGEKGSITPGHNKVPIGKTLGYCYDFDVEDACEEVHLNPKGKYSQKAYALLRGYRGVKPILFVDQYGCDYTGNLAECLQDYAEFSLQEMKELQSIWIVSQDFDIVIAWHVVRDPRVAMRLQTIATIRSIEYVAQPIEDLLDGDVVIREPAHLLAANAIVLKLPNLLDVMSHTDDSVVEFVYKAKLRDCGFVMQYGYVDCHGANCDYRGWVPGNMIDGFPCPQCHINYGPCEVKAQSSGVLPENAVLYTNGTDITTQESFKLYGHSVVPFGSCIYWSPCPGMWIPIVKSSVKSYDNMVYSGVVGCKTIVKETDIVCHALYLDYVKYSCGNLEQRHTLGLGEVWHKQLLVNRGDYTMLLDNIDLFVKRRAEFSCKFFTCGDGFVPFLLDGLVPRSYYLIKSGFAFTSLMSKFGQEVADMCMDMLVFFMDDVSVATVYVKKYVGKLVSQFKLLGAGLVKKLIEWFDAFVETTACAAGWLLYQLLNGLFVVSQGVITFKNNVPDYAKKIIGKFQEFYKLLLDCAAVALLKGLSVVKTVNGFVCIAGNKVYKVSTGIISGFVLPSDAQVEPLHFLEGVAEPVVIEDDVVEEMKTPLAFHECCQPPRSFEKICIVDKVYMAKCGDQFFPVVMNDQTIGVLDQAWRFPCAGKKVAFDEQ

Annotated regions:
phrase: FVDQYGCDYTGNLAECLQDYAEFSLQEMKELQSIWIVSQDFDIVIAWHVVRDPRVAMRLQTIATIRSIEYVAQPIEDLLDGDVVIREPAHLLAANAIVLKLPNLLDVMSHTDDSVVEFVYKAKLRDCGFVMQYGYVDCHGANCDYRGWVPGNMIDGFPCPQCHINYGPCEVKAQSSGVLPENAVLYTNGTDITTQESFKLY
type: DOMAIN
name: NSP2_N_CoV
description: Nonstructural protein 2, N-terminal domain, coronavirus

phrase: ILFVDQYGCDYTGNLAECLQDYAEFSLQEMKELQSIWIVSQDFDIVIAWHVVRDPRVAMRLQTIATIRSIEYVAQPIEDLLDGDVVIREPAHLLAANAIVLKLPNLLDVMSHTDDSVVEFVYKAKLRDCGFVMQYGYVDCHGANCDYRGWVPGNMIDGFPCPQCHINYGPCEVKAQSSGVLPENAVLYTNGTDITTQESFKLYGHSVVPFGSCIYWSPCPGMWIPIVKSSVKSYDNMVYSGVVGCKTIVKETDIVCHALYLD
type: DOMAIN
name: NSP2_N_CoV
description: Nonstructural protein 2, N-terminal domain, coronavirus

phrase: PILFVDQYGCDYTGNLAECLQDYAEFSLQEMKELQSIWIVSQDFDIVIAWHVVRDPRVAMRLQTIATIRSIEYVAQPIEDLLDGDVVIREPAHLLAANAIVLKLPNLLDVMSHTDDSVVEFVYKAKLRDCGFVMQYGYVDCHGANCDYRGWVPGNMIDGFPCPQCHINYGPCEVKAQSSGVLPENAVLYTNGTDITTQESFKLYGHSVVPFGSCIYWSPCPGMWIPIVKSSVKSYDNMVYSGVVGCKTIVKETDIVCHALYLDYVKYSCGNLEQRHTLGLGEVWHKQLLVNRGDYTMLLDNIDLFVKRRAEFSCKFFTCGDGFVPFLLDGLVPRSYYLIKSGFAFTSLMSKFGQEVADMCMDMLVFFMDDVSVATVYVKKYVGKLVSQFKLLGAGLVKKLIEWFDAFVETTACAAGWLLYQLLNGLFVVSQGVITFKNNVPDYAKKIIGKFQEFYKLLLDCAAVALLKGLSVVKTVNGFVCIAGNKVYKVSTGIISGFVLPSDAQVEPLHFLEGVAEPVVIEDDVVEEMKTPLAFHECCQPPRSFEKICIVDKVYMAKCGDQFFPVVMNDQTIGVLDQAWRFPC
type: DOMAIN
name: NSP2_MHV-like
description: Non-structural protein 2, MHV-like

phrase: DIFVDKDPLKVESLTKAAMQFGSAVLVKPPRRMPLSMCYEWGVFPQGYAMGLFRRRCQCLTGRCLTNYHVAYQLFNITPDGVCLGNGVFIGWFVPTDAIPLYAHKWLQPWFIYLRKS
type: DOMAIN
name: a/bCoV_NSP1_glob
description: NSP1, globular domain, alpha/betacoronavirus

phrase: VKTVNGFVCIAGNKVYKVSTGIISGFVLPSDAQVEPLHFLEGVAEPVVIEDDVVEEMKTPLAFHECCQPPRSFEKICIVDKVYMAKCGDQFFPVVMNDQTIGVLDQAWRFPC
type: DOMAIN
name: CoV_NSP2_C
description: Non-structural protein 2, C-terminal domain, coronavirus

phrase: FDVEDACEEVHLNPKGKYSQKAYALLRGYR
type: DOMAIN
name: bCoV_NSP1_C
description: NSP1, C-terminal domain, betacoronavirus

phrase: CGNLEQRHTLGLGEVWHKQLLVNRGDYTMLLDNIDLFVKRRAEFSCKFFTCGDGFVPFLLDGLVPRSYYLIKSGFAFTSLMSKFGQEVADMCMDMLVFFMDDVSVATVYVKKYVGKLVSQFKLLGAGLVKKLIEWFDAFVETTACAAGWLLYQLLNGLFVVSQGVITFKNNVPDYAKKIIGKFQEFYK
type: DOMAIN
name: CoV_NSP2_M
description: Non-structural protein 2, middle domain, coronavirus
Protein sequence:
MIPSAYPDAKEMARLTARMLLEIHAVHFNAKDPFTLSSGLPSPTYIDCRKLISFPRIRATLMDFLTVTVMRDVGFEAFDNIAGGETAGIPFAALVAERMALPMTYVRKKPKGYGRNARIEGAMGEGERVLLVEDLTTDGGSKLSFVDAIRETGATCGHTAVIFYYDIFPETTKTLGDHGVALHSLCTWWDVLAEAKQQGVFDEATLSEVEKFLHNPRKWQEANKK

Annotated regions:
phrase: FDNIAGGETAGIPFAALVAERMALPMTYVRKKPKGYGRNARIEGAMGEGERVLLVEDLTTDGGSKLSFVDAIRETGATCGHTAVIF
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: IAGGETAGIPFAALVAERMALPMTYVRKKPKGYGRNARIEGAMGEGERVLLVEDLTTDGGSKLSFVDAIRETGATCGHTAVIFYYDIFPETTKTLGDHGVALHSLC
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: MLLEIHAVHFNAKDPFTLSSGLPSPTYIDCRKLISFPRIRATLMDFLTVTVMRDVGFEAFDNIAGGETAGIPFAALVAERMALPMTYVRKKPKGYGRNARIEGAMGEGERVLLVEDLTTDGGSKLSFVDAIRETGATCGHTAVIFYYDIFPETTKTLGDHGVALHSL
type: DOMAIN
name: Or_phspho_trans_dom
description: Orotate phosphoribosyl transferase domain
Protein sequence:
MKSISCGKEYTEDVRNINIRPEQLDDFVGQKDLIQNLKVFINAAQTRTEALDHVLLYGPPGLGKTTLAQIVSKELRVSFRATSGPLLSKAGDLAAVLTTLNAKDVLFIDEIHRLNRSIEEVLYTAMEDFCLDILVGEGPSTRTLRIDLPPFTLIGATTRLGLLSAPLRDRFGIPLHLEFYSFEELVNIIKRGARVLSAEIEEDAAREIACRARGTPRIALRLLRRIRDFVEVKDDKKITYEVADSVLLKLGVDKMGLNKLDMNYLRFLFNTSGPVGIDTISIALSEDVGNIEETVEPYLIKISFVKRTPRGRVLTDQAKEYLSL

Annotated regions:
phrase: YSFEELVNIIKRGARVLSAEIEEDAAREIACRARGTPRIALRLLRRIRDFVEVKDDKKITYEVADSVLLKLGV
type: DOMAIN
name: AAA_lid_4
description: RuvB, AAA lid domain

phrase: IRPEQLDDFVGQKDLIQNLKVFINAAQTRTEALDHVLLYGPPGLGKTTLAQIVSKELRVSFRATSGPLLSKAGDLAAVLTTLNAKDVLFIDEIHRLNRSIEEVLYTAMEDFCLDILVGEGPSTRTLRIDLPPFTLIGATTRLGLLSAPLRDRFGIPLH
type: DOMAIN
name: RuvB-like_N
description: RuvB-like P-loop domain

phrase: KMGLNKLDMNYLRFLFNTSGPVGIDTISIALSEDVGNIEETVEPYLIKISFVKRTPRGRVLTDQAKEY
type: DOMAIN
name: RuvB_C
description: RuvB C-terminal winged helix domain

phrase: ALDHVLLYGPPGLGKTTLAQIVSKELRVSFRATSGPLLSKAGDLAAVLTTLNAKDVLFIDEIHRLNRSIEEVLYTAMEDFCLDILVGEGPSTRTLRIDLPPFTLIGATTRLGLLSAPLRDRFGIPLHLEFY
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain
Protein sequence:
MVQGTTSDAGKTTLVAALCRLLAQEGVRVVPFKPQNMALNSAVTADGGEIGRAQALQAVAAGLQPHTDMNPILLKPSSDTGAQVIIHGKARSDMNARDYHAYKPIAMQAVLESYQRLQTQYESVLVEGAGSPAEVNLRERDIANMGFAEAVDCPVILVADIDRGGVFAHIIGTLACLSESERRRTVGFVINRFRGDISLLEPGLKWLEEQTGKPVLAVLPYLHGLFLDAEDAVEHTQAVRGAFRVVVPVPPRISNHTDFDALRAHPEIDLQLVGPGQPIPAADLIILPGSKNTRGDLEWLIANGWREALLRHLRYGGKIIGICGGYQMLGMTVADPHGVEGTPGESAGLGLLDVATELTRDKRLEQVSGVCAFADVGVSGYEIHMGTSDGAARAQPAFLIDGRPEGARSADDQVLGTYLHGLFDTPDACAALLHWAGLNSDVRVDTAQLREASLQRLAAAARPLLAALRALPDYSR

Annotated regions:
phrase: MVQGTTSDAGKTTLVAALCRLLAQEGVRVVPFKPQNMALNSAVTADGGEIGRAQALQAVAAGLQPHTDMNPILLKPSSDTGAQVIIHGKARSDMNARDYHAYKPIAMQAVLESYQRLQTQYESVLVEGAGSPAEVNLRERDIANMGFAEAVDCPVILVADIDRGGVFAHIIGTLACLSESERRRTVGFVINRFRGDISLLEPGLKWLEEQTGKPVLAVL
type: DOMAIN
name: CobQ_N
description: Cobyric acid synthase, N-terminal domain

phrase: RVVVPVPPRISNHTDFDALRAHPEIDLQLVGPGQPIPAADLIILPGSKNTRGDLEWLIANGWREALLRHLRYGGKIIGICGGYQMLGMTVADPHGVEGTPGESAGLGLLDVATELTRDKRLEQVSGVCAFADVGVSGYEIHMGTSDGAARAQPAFLIDGRPEGARSADDQVLGTYLHGLFDT
type: DOMAIN
name: GATase_3
description: CobB/CobQ-like glutamine amidotransferase

phrase: VVVPVPPRISNHTDFDALRAHPEIDLQLVGPGQPIPAADLIILPGSKNTRGDLEWLIANGWREALLRHLRYGGKIIGICGGYQMLGMTVADPHGVEGTPGESAGLGLLDVATELTRDKRLEQVSGVCAFADVGVSGYEIHMGTSDGAARAQPAFLIDGRPEGARSADDQVLGTYLHGLFDTPDACAAL
type: DOMAIN
name: CobQ_GATase1
description: Cobyric acid synthase, glutamine amidotransferase type 1

phrase: MVQGTTSDAGKTTLVAALCRLLAQEGVRVVPFKPQNMALNSAVTADGGEIGRAQALQAVAAGLQPHTDMNPILLKPSSDTGAQVIIHGKARSDMNARDYHAYKPIAMQAVLESYQRLQTQYESVLVEGAGSPAEVNLRERDIANMGFAEAVDCPVILVADIDRGGVFAHIIGTLACLSESERRRTVGFVINRFRGDISLLEPGLKWLEEQTGKPVLAVLPYLH
type: DOMAIN
name: CobQ/CobB/MinD/ParA_Nub-bd_dom
description: CobQ/CobB/MinD/ParA nucleotide binding domain
Protein sequence:
MFSLSSTVQPQVTVPLSHLINAFHTPKNTSVSLSGVSVSQNQHRDVVPEHEAPSSECMFSDFLTKLNIVSIGKGKIFEGYRSMFMEPAKRMKKSLDTTDNWHIRPEPFSLSIPPSLNLRDLGLSELKIGQIDQLVENLLPGFCKGKNISSHWHTSHVSAQSFFENKYGNLDIFSTLRSSCLYRHHSRALQSICSDLQYWPVFIQSRGFKTLKSRTRRLQSTSERLAETQNIAPSFVKGFLLRDRGSDVESLDKLMKTKNIPEAHQDAFKTGFAEGFLKAQALTQKTNDSLRRTRLILFVLLLFGIYGLLKNPFLSVRFRTTTGLDSAVDPVQMKNVTFEHVKGVEEAKQELQEVVEFLKNPQKFTILGGKLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRPDVKGRTEILKWYLNKIKFDQSVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKELEFSKDKILMGPERRSVEIDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTYSDTGKLSPETQSAIEQEIRILLRDSYERAKHILKTHAKEHKNLAEALLTYETLDAKEIQIVLEGK

Annotated regions:
phrase: ILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: SVDPEIIARGTVGFSGAELENLVNQAALKAAVDGKEMVTMKEL
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: VIIIGATNFPEALDNALI
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: LPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPNEGVIIIGATNFPEALDNALIRPGRFDMQVTVPRP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: IDNKNKTITAYHESGHAIIAYYTKDAMPINKATIMPRGPTLGHVSLLPENDRWNETRAQLLAQMDVSMGGRVAEELIFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTYSDTGKLSPETQSAIEQEIRILLRDSYERAKHILKTHAKEHKNLAEALLTYETLDAKEI
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41
Protein sequence:
MVLLKSINKSDFFKLDDGQSPQLFLNRKALQFQSELNTKQFAVSMDDQDPLGYVRQKFYYPKLQTLPNVDKKRVHLSHECIYLCGQSLGLMPVQTFKNMDAFMHDWATLGVYGHFTGSNPWAKCDIPCIPTMSLLVGGQIKEVAVMNQLSSNLHFMMTTFYQPKGERYKILYEDHAFPSDQYAIHSQIKLRGYDPKDAKIVLKARENERCLRTEDILEVLRREGHSIALVMIGGIHYYTGQLFDIETITRVAHEQGCRVGWDLAHAVGNVPLKLHDWQVDFAVWCTYKYLNGGAGCIGGVFVHSNNLKDNQLATLDGWWSNNESTRFAMLDNIDRDTTALGFRVSNPSIHQCAALAASLDIFEEVGIEQIRAKSMIATQYLQHLLQTELADTGLCQFTLLTPLNPQERGAQLSFRPIGITAQQIHDELEKVGVVIDIRDDIIRIAPAPLYNSFTDIFQFVTLLKEAIITLKSICE

Annotated regions:
Protein sequence:
MIESTTSHQDFQQRSMTGYALEHPSYRIRGALFRHQDDGRLLSGCGGDIEVIHALELERSQHTCLPVRVTNVVVFGSNDVVRLIQPIEGTEDVIVNGDYHVSIVQSVELFESSTVSKSRILKLPGKIIAVNAEKHSNTELLLVFLLETGIFHYSFCAHTSTHFQCIQAFRCNRPITSGLLWRDSGLLHVAYYDGFVRVGVVHEQYDDMLLVKRVAVNRNNLSVLLDVVFEEIGRIQKFEDTEKQRREDMLTTSKSLSDKLVAEEEVVEGDTTNDDFAKLKIEFKNQSIRCERVSQRLTSLRKLITIIKSALDMNDQIEQMISLLVDELSELEKLEQLCKEVERTGNQNLIGKSWIAVEEKQMVVEELIAKVNSDQIKKHSDVWEQKIDQIIDQLNGCSEAAKDMRLIISQNIFEHRGDKKDVFTHFVLDAQSRDITLYCLSGLTTMAIYPRKGKRVASISLDASFATCLTAACAMKSAEGVYVADQNNVFPTYFYRNRPKAGKGEKRYLDAGNQLQLPTFDSISSILVEPHQMILGSVTGGLLHLSFDFASNYEHFVVASSILAHPISSGSVNCIKLLATGESLLALHCTDTEIVVSEKDQERWHRVTHHTGGAHAIAVTPFSVDERGAFAVVASDTFVRLKVLQYAEESLIGLHDLGESRAEDENGHPIEVLNVSLDPSMQYRQLPCKLRYAVGFADKAIRTYVALLTGQHDFNVQEKFIAQIEPLFNVQNMICFHGRPMGCYVSCAKTLQIWNDLDRHQQKKLKSERMQLLKLSSSVTSMERAEGYLLLGFADDRLSIYEEKGNGAVDLVGTVDDWHKGLNDRIVMSLRTRASKTSCGTRLFIHSLTAHHIVIHTVLVTASKIEQHDFIVAHEHSMSQPIGFEFVSYKYFEFLVYGRGISNEKLSIEDRKRMDNFRDFEFN

Annotated regions:
Protein sequence:
MLYTLLLVPSLFLLVMPVPSQGWSRPLWYQVGLDLQPWGCQPNSPDIWGCQPNSLDSCKNSLGCPGYWLGLGGNRIYPVAGVTITTTMLLVVSRVIVHRWRAKVAKGQLPAVTSSSGKHWKEQPTVSDRTLVLRVLHMLDAILLHIEGHLQGLASQQQIQIKGSPPQSG

Annotated regions:
Protein sequence:
MKEKIAYLGMGIWGFCLASLLANKGYRVVGWARNPDLIAQLQIEKRHPQAPDIPLHPNLSFTTDMEEAVNEASMIVEGVSSAGIRPVSEQLKAITDLKVPFVITSKGIEQHTGLLLSEIVVEIFGNNASQYLGYLSGPSIAREVLKGCPCSVVISAYNPDTLKKIHNAFLTPTFRVYPNSDLKGVALGGALKNIIAIACGISDGFHFGDNAKSGLVTRGLHEIRKFATIMDCRPDTLNGLAGLGDLCTTCFSSLSRNTKFGKLIAQGLTLEQAKAEIGMVVEGAYTALSAYQIAKHHKIDMPITTGIYRVLYENLDIKEGIAALLQRNTKEEYL

Annotated regions:
phrase: DLKGVALGGALKNIIAIACGISDGFHFGDNAKSGLVTRGLHEIRKFATIMDCRPDTLNGLAGLGDLCTTCFSSLSRNTKFGKLIAQGLTLEQAKAEIGMVVEGAYTALSAYQIAKHHKIDMPITTGIYRVLYENLDIKE
type: DOMAIN
name: G3P_DH_NAD-dep_C
description: Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal

phrase: KIAYLGMGIWGFCLASLLANKGYRVVGWARNPDLIAQLQIEKRHPQAPDIPLHPNLSFTTDMEEAVNEASMIVEGVSSAGIRPVSEQLKAITDLKVPFVITSKGIEQHTGLLLSEIVVEIFGNNASQYLGYLSGPSIAREVLKGCPCSVVISAYNP
type: DOMAIN
name: G3P_DH_NAD-dep_N
description: Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal
Protein sequence:
MKKQQKTLALWILLILGMIFLAKECQRDVSSAKKINFSEFVSAVENGRVAEVTMNQSKSKIMGRYVDGFENGVHFELTGNTGDVTYNLLKENGIVPNYQREEEQSTFSMLLINWFPMILLFVIFFFFLRQLQAGGGKAMSFGKSKAKMLNESDKKVTFTDVSGVEEAKEELVEIVDFLKEPKKYTKLGGKIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQGKKNAPCIIFIDEIDAVGRHRGHGMGGGHDEREQTLNQMLVEMDGFESNEGVIIMAATNRVDVLDPALLRPGRFDRRVTVGRPDVRGRLGILKVHTKKTPLEDDVNLETIAKGTPGFTGADLANLVNEAALIAARENKSKLGNIDFESAKDKVLMGVERKSMMISDEEKRNTAFHESGHVIVGLSLPGNDPVHKVSVIPRGGALGVTVTLPDEDKLSMSKEKANNMIAMLLGGRIAEELIFRDYTSGASNDIERATDIARKMVCNWGMSSSLGPVNFTANPNQPFGYGAGADNSTYSEETAKKIDDEVGSIIRRNYDVAKKILMDRKDILTRMSEALILWETLDSDQIKMLMEGKEVGVPVLKKEGLKGEVARESSNDNSEDDHPGKKTEVITDDGNPTLA

Annotated regions:
phrase: VLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQGKKNAPCIIFIDEIDAVGRHRGHGMGGGHDEREQTLNQMLVEMDGFESNEGVIIMAATNRVDVLDPALLRPGRFDRRVTV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: LWILLILGMIFLAKECQRDVSSAKKINFSEFVSAVENGRVAEVTMNQSKSKIMGRYVDGFENGVHFELTGNTGDVT
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular

phrase: MMISDEEKRNTAFHESGHVIVGLSLPGNDPVHKVSVIPRGGALGVTVTLPDEDKLSMSKEKANNMIAMLLGGRIAEELIFRDYTSGASNDIERATDIARKMVCNWGMSSSLGPVNFTANPNQPFGYGAGADNSTYSEETAKKIDDEVGSIIRRNYDVAKKILMDRKDILTRMSEALILWETLDSDQIK
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: IPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQGKKNAPCIIFIDEIDAVGRHRGHGMGGGHDEREQTLNQMLVEMDGFESNEGVIIMAATNRVDVLDPALLRPGRFDRRVTVGRP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VIIMAATNRVDVLDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: DVNLETIAKGTPGFTGADLANLVNEAALIAARENKSKLGNIDF
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain