nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTLENNMDKKLFCISTYGCQMNEEDSEKLSGMLKSQGYERTENKEEASIIIFNTCCVRENAENKVFGNLGQLKQLKKKNPNLVIAICGCMMQQVGMADKVLKTFPYVDIIFGTHNAHKFPEYLHRVLQEGVQVKEILNKEEGIVEGLPIDRKSDVKAFVTIMYGCNNFCTYCIVPYVRGRERSRKSEDIIKEIEELVSKGYKEITLLGQNVNSYGKGLEEDIDFAGLLRKVNEVKGLERVRFMTSHPKDLSDDVIMAIKECDKLCEQVHLPVQSGSSRILKEMNRHYDREYYLDLVKKIKSEIPDVTLTTDIIIGFPGETEEDFLDTLSLCEEVGYDSAFTFIYSRRNHTPADKMENQIPDDIKHDRFNRLVEAINKKVVIKNKEYEGKVVEVLVEGPSKNDETKLTGRTRNGKLVNFAGDEKLVGELVNLKIVRAQPFSLIGEIVE

Annotated regions:
phrase: KEYEGKVVEVLVEGPSKNDETKLTGRTRNGKLVNFAGDEKLVGELVNLKIVRAQPFSLIGEI
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: MDKKLFCISTYGCQMNEEDSEKLSGMLKSQGYERTENKEEASIIIFNTCCVRENAENKVFGNLGQLKQLKKKNPNLVIAICGCMMQQVGMADKVLKTFPYVDIIFGTHNAHKFPEYLHRVLQEGVQVKEILNKEEGIVEGLPIDRKSDVKAFVTIMYGCNNFCTYCIVPYVRGRERSRKSEDIIKEIEELVSKGYKEITLLGQNVNSYGKGLEEDIDFAGLLRKVNEVKGLERVRFMTSHPKDLSDDVIMAIKECDKLCEQVHLPVQSGSSRILKEMNRHYDREYYLDLVKKIKSEIPDVTLTTDIIIGFPGETEEDFLDTLSLCEEVGYDSAFTFIYSRRNHTPADKMENQIPDDIKHDRFNRLVEAINKKVVIKNKEYEGKVVEVLVEGPSKNDETKLTGRTRNGKLVNFAGDEKLVGELVNLKIVRAQPFSLIGEI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VTIMYGCNNFCTYCIVPYVR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: VKAFVTIMYGCNNFCTYCIVPYVRGRERSRKSEDIIKEIEELVSKGYKEITLLGQNVNSYGKGLEEDIDFAGLLRKVNEVKGLERVRFMTSHPKDLSDDVIMAIKECDKLCEQVHLPVQSGSSRILKEMNRHYDREYYLDLVKKIKSEIPDVTLTTDIIIGFPGETEEDFLDTLSLCEEVGYDSAFTFIYSRRNHTPADKMENQIPDDIKHDRFNRLV
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: KLFCISTYGCQMNEEDSEKLSGMLKSQGYERTENKEEASIIIFNTCCVRENAENKVFGNLGQLKQLKKKNPNLVIAICGCMMQQVGMADKVLKTFPYVDIIFGTHNAHKFPEYLHRVL
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: KEYEGKVVEVLVEGPSKNDETKLTGRTRNGKLVNFAGDEKLVGELVNLKIVRAQPFSLIGEIV
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: CISTYGCQMNEEDSEKLSGMLKSQGYERTENKEEASIIIFNTCCVRENAENKVFGNLGQLKQLKKKNPNLVIAICGCMMQQVGMADKVLKTFPYVDIIF
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: TIMYGCNNFCTYCIVPYVRGRERSRKSEDIIKEIEELVSKGYKEITLLGQNVNSYGKGLEEDIDFAGLLRKVNEVKGLERVRFMTSHPKDLSDDVIMAIKECDKLCEQVHLPVQSGSSRILKEMNRHYDREYYLDLVKKIKSEIPDVTLTTDIIIGFPGETEEDFLDTLS
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: RKSDVKAFVTIMYGCNNFCTYCIVPYVRGRERSRKSEDIIKEIEELVSKGYKEITLLGQNVNSYGKGLEEDIDFAGLLRKVNEVKGLERVRFMTSHPKDLSDDVIMAIKECDKLCEQVHLPVQSGSSRILKEMNRHYDREYYLDLVKKIKSEIPDVTLTTDIIIGFPGETEEDFLDTLSLCEEVGYDSAFTFIYSRRNHTPADKMENQIPDDIKHDRFNRLVEAINKKVVI
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MLKMESTQQMAVSIINSSFEAAVVAATSALENMGIEYDYQDIYSRVKNKFDFVMDDSGVKNNLIGKAITIDQALNNKFGSAIRNRNWLADTSRPAKLDEDVNKLRMMLSSKGIDQKMRVLNACFSVKRIPGKSSSIIKCTKLMRDKLERGEVEVDDSFVDEKMEVDTIDWKSRYEQLEQRFESLKSRVNEKYNNWVLKARKMNENMHSLQNVISQQQAHIAELQVYNNKLERDLQNKIGSLTSSIEWYLRSMELDPEIKADIEQQINSIDAINPLHAFDDLESVIRNLISDYDKLFLMFKGLIQRCNYQYSFGCE

Annotated regions:
Protein sequence:
MNSSALPHVTIFTDGACSGNPGPGGWGAILRFGEIEKELKGGEPHTTNNRMELLAAISALEALKKAASVDLTTDSQYVRQGITSWIHNWKRNGWRTADKKPVKNADLWQRLDTALQPHQVRWHWIKGHAGHDENERADQLAREGVALARLK

Annotated regions:
phrase: ALPHVTIFTDGACSGNPGPGGWGAILRFGEIEKELKGGEPHTTNNRMELLAAISALEALKKAASVDLTTDSQYVRQGITSWIHNWKRNGWRTADKKPVKNADLWQRLDTALQPHQVRWHWIKGHAGHDENERADQLAREGV
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: HVTIFTDGACSGNPGPGGWGAILRFGEIEKELKGGEPHTTNNRMELLAAISALEALKKAASVDLTTDSQYVRQGITSWIHNWKRNGWRTADKKPVKNADLWQRLDTALQPHQVRWHWIKGHAGHDENERADQLAREG
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain
Protein sequence:
MSKERPKRNIIQKKYDDSDGIPWSEERVVRKVLYLSLKEFKNAQKRQHGEGLAGSLKAVNGLLGNAQAKALGPASEQSENEKDDASQVSSTSNDVSSSDFEEGPSRKRPRLQAQRKFAQSQPNSPSTTPVKIVEPLLPPPATQISDLSKRKPKTEDFLTFLCLRGSPALPNSMVYFGSSQDEEDVEEEDDETEDVKATTNNASSSCQSTPRKGKTHKHVHNGHVFNGSSRSAREKEPAHKHRSKEATPGKEKHSEPRADSRREQASGAQPTAASAAASSAKGLAANHQPPPSHRSAQDLRKQVSKVNGVTRMSSLGAGTNSAKKIREVRPSPSKTVKYTATVTKGTVTYTKAKRELVKETKPNHHKPSSAVNHTISGKTESSNAKTRKQVLSLGGASKSTGPAASGLKASSRLNPKSCTKEVGGRQLREGLRNSKRRLEEAQQVDKPQSPPKKMKGVAGNAEAPGKKASAASGEKSLLNGHVKKEVPERSLERNRPKRAAAGKNMLGKQAHGKTEGTPCENRSTSQPESSHKPHDPQGKPEKGSGKSGWAAMDEIPVLRPSAKEFHDPLIYIESVRAQVEKYGMCRVIPPPDWRPECKLNDEMRFVTQIQHIHKLGRRWGPNVQRLACIKKHLRSQGITMDELPLIGGCELDLACFFRLINEMGGMQQVTDLKKWNKLADMLRIPKTAQDRLAKLQEAYCQYLLSYDSLSPEEHRRLEKEVLMEKEILEKRKGPLEGHTESDHHKFHSLPRFEPKNGLVHGVTPRNGFRSKLKEVGRAPLKTGRRRLFAQEKEVVKEEEEDKGVLNDFHKCIYKGRSVSLTTFYRTARNIMNMCFSKEPAPAEIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTGSILRHLGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAEEENKLEDVVHTLLQGNGTPGLQMLESNVMISPEVLCKKGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYNVSETVHFATTQWTSMGFETAKEMKRRHIAKPFSMEKLLYQIAQAEAKKENGPTLSTISALLDELRDTELRQRRLLFEAGLHSSARYGSHDGNSTVADGKKKPRKWLQLETSERRCQICQHLCYLSMVVQENENVVFCLECALRHVEKQKSCRGLKLMYRYDEEQIISLVNQICGKVSGKHGGIENCLNKPTPKRGPRKRATVDVPPSRLPSS

Annotated regions:
phrase: WGPNVQRLACIKKHLRSQGITMDELPLIGGCELDLACFFRLINEMGGMQQVTDLKKWNKLADMLRIPKTAQDRLAKLQEAYCQYLLSYDSLS
type: DOMAIN
name: ARID_dom
description: ARID DNA-binding domain

phrase: GPNVQRLACIKKHLRSQGITMDELPLIGGCELDLACFFRLINEMGGMQQVTDLKKWNKLADMLRIPKTAQDRLAKLQEAYCQYLLSYDSLSP
type: DOMAIN
name: ARID_dom
description: ARID DNA-binding domain

phrase: CQICQHLCYLSMVVQENENVVFCLECALRHVEKQKSCRGLKLMYRYDEEQ
type: DOMAIN
name: Znf_C5HC2
description: Zinc finger, C5HC2-type

phrase: EIPVLRPSAKEFHDPLIYIESVRAQVEKYGMCRVIPPPDWR
type: DOMAIN
name: JmjN
description: JmjN domain

phrase: WLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAEEENKLEDVVHTLLQGNGTPGLQMLESNVMISPEVLCKKGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYNVSETVH
type: DOMAIN
name: JmjC_dom
description: JmjC domain

phrase: IPVLRPSAKEFHDPLIYIESVRAQVEKYGMCRVIPPPDWRP
type: DOMAIN
name: JmjN
description: JmjN domain

phrase: LACIKKHLRSQGITMDELPLIGGCELDLACFFRLINEMGGMQQVTDLKKWNKLADMLRIPKTAQDRLAKLQEAYCQYLLSY
type: DOMAIN
name: ARID_dom
description: ARID DNA-binding domain

phrase: PVLRPSAKEFHDPLIYIESVRAQVEKYGMCRVI
type: DOMAIN
name: JmjN
description: JmjN domain

phrase: PFSRHGWNLTVLPNNTGSILRHLGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAEEENKLEDVVHTLLQGNGTPGLQMLESNVMISPEVLCKKGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYNVSETVHFATTQWTSMGFETAKEM
type: DOMAIN
name: JmjC_dom
description: JmjC domain

phrase: PFSRHGWNLTVLPNNTGSILRHLGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAEEENKLEDVVHTLLQGNGTPGLQMLESNVMISPEVLCKKGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYNVSETVHFATTQWTSMGFETAKEM
type: DOMAIN
name: JmjC_dom
description: JmjC domain
Protein sequence:
MGQCLRYQMHWEDLEEYQALTFLTRNEILCIHDSFLKLCPPGKYYKEATLTVDQVSSLPALRVNPFRDRICRVFSHNNVFSFEDVLGMASVFSEQACPSLKIEYAFRIYDFNENGFIDEEDLQRIILRLLNSDDMSEDLLTDLTSHVLNESDLDNDNMLSFSEFEHAMAKSPDFMNSFRIHFWGC

Annotated regions:
phrase: KIEYAFRIYDFNENGFIDEEDLQRIILRLLNSDDMSEDLLTDLTSHVLNESDLDNDNMLSFSEFEHAM
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: CPSLKIEYAFRIYDFNENGFIDEEDLQRIILRLLN
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: DLDNDNMLSFSE
type: BINDING_SITE
name: EF_Hand_1_Ca_BS
description: EF-Hand 1, calcium-binding site

phrase: KIEYAFRIYDFNENGFIDEEDLQRIILRLLNSDDMSEDLLTDLTSHVLNESDLDNDNMLSFSEFEHA
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: DFNENGFIDEED
type: BINDING_SITE
name: EF_Hand_1_Ca_BS
description: EF-Hand 1, calcium-binding site

phrase: KIEYAFRIYDFNENGFIDEEDLQRIILR
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: LTSHVLNESDLDNDNMLSFSEFEHAMAK
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain
Protein sequence:
MIKLLYPEFWQKRNIIAYLLLPISLIYQFLGYLRASLARPIMLPAKVICVGNCSVGGTGKTQIVMYLAKLLKARNVSFVIVTKAYGSNLKSATTIHQGHTALEAGDEGVILAKYGAVIATKSIKEIVPLINELKPDTIIVDDFLQNPYFHKDFTIVSVDSQRLFGNGFLIPAGPLRQYPNKVLDAADLIFLVSSHQDKIPNILTPYVNKLINAQIVPANNIDKTKNYFAFSGIGNPERFFATLKNYGLNITGYKIFPDHYNYLQADLENLYSLAKEHNATLVTTRKDHVKFNDLNNNIVCLDVELSINNPDLLNEKIFKKAQIFN

Annotated regions:
Protein sequence:
MTQSVVVQVGQCGNQIGCCFWDLALREHAAVNQKGIYDDAISSFFRNVDTRAVGDGGSISKGRISSLKARAVLIDMEEGVVNEILQGPLRDVFDSKQLITDISGSGNNWAVGHKVFGCLYREQILEKLRKSAEQCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVTAVYPSSEDDVITSPYNSMLAMKELNEHADCVLPIDNQSLFDIISKIDLVVNSGKLGSAVKPKSLITSNMGAVKKHHKKPFDAMNNIVANLLLSLTSSARFEGSLNMDLNEISMNLVPFPKLHYLVSSLTPLYTLADVNIPPRRLDQMFSDAFSKDHQLIQADPRHSLYLACALIVRGNVQISDLRRNIERLKPALQFVSWNQEGWKTSLCSVPPVGHSHSLLALANNTCVKPTFMELRERFTRLYKKKAHLHHYLQVDGMEESTFTEAVSSLSALIQEYSDLDATKSLPVPDVPRLSVAL

Annotated regions:
phrase: DGGSISKGRISSLKARAVLIDMEEGVVNEILQGPLRDVFDSKQLITDISGSGNNWAVGHKVFGCLYREQILEKLRKSAEQCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVTAVYPSSEDDVITSPYNSMLAMKELNEHADCVLPIDNQSLFDIISKIDLVVNSGKLGSAVKPKSLITSNMGAVKKHHKKPFDAMNNIVANLLLSLTSSARFE
type: DOMAIN
name: Tubulin_FtsZ_GTPase
description: Tubulin/FtsZ, GTPase domain

phrase: LNMDLNEISMNLVPFPKLHYLVSSLTPLYTLADVNIPPRRLDQMFSDAFSKDHQLIQADPRHSLYLACALIVRGNVQISDLRRNIERLKPALQFVSWNQEGWKTSLCSVPPVGHSHSLLALANNTCVKPTFMELR
type: DOMAIN
name: Tubulin/FtsZ_2-layer-sand-dom
description: Tubulin/FtsZ, 2-layer sandwich domain

phrase: VVVQVGQCGNQIGCCFWDLALREHAAVNQKGIYDDAISSFFRNVDTRAVGDGGSISKGRISSLKARAVLIDMEEGVVNEILQGPLRDVFDSKQLITDISGSGNNWAVGHKVFGCLYREQILEKLRKSAEQCDCLQCFFIIHSMGGGTGSGLGTFLLKVLEDEFPEVYRFVTAVYPSSEDDVITSPYNSMLAMKELNEHADCVLPIDNQSLFDI
type: DOMAIN
name: Tubulin_FtsZ_GTPase
description: Tubulin/FtsZ, GTPase domain

phrase: PKLHYLVSSLTPLYTLADVNIPPRRLDQMFSDAFSKDHQLIQADPRHSLYLACALIVRGNVQISDLRRNIERLKPALQFVSWNQEGWKTSLCSVPPVGHSHSLLALANNTCVKPTFMEL
type: DOMAIN
name: Tubulin/FtsZ_2-layer-sand-dom
description: Tubulin/FtsZ, 2-layer sandwich domain

phrase: GGGTGS
type: CONSERVED_SITE
name: Tubulin_CS
description: Tubulin, conserved site
Protein sequence:
MSLTYKPKMQHEDMQDLSSQIRFVAAEGKIWLGEQRMLVMQLSTLASFRREIISLIGVERAKGFFLRLGYQSGLMDAELARKLRPAMREEEVFLAGPQLYALKGMVKVRLLTMDIAIRDGRFNVEAEWIDSFEVDICRTELGLMNEPVCWTVLGYASGYGSAFMGRRIIFQETSCRGCGDDKCLIVGKTAEEWGDVSSFEAYFKSDPIVDERYELQTQVANLRNRLKQYDGQYYGIGHSPAYKRICETIDKAARGRVSVLLLGETGVGKEVIARSVHLRSERAEQPFVAVNCAAIPPDLIESELFGVDKGAYTGAVNARAGRFERANGGTIFLDEVIELTPRAQATLLRVLQEGELERVGGDRTRKVDVRLITATNENLEEAVKMGRFRADLFFRLNVFPVHIPPLRERVEDIPLLVEHFLRRHHKEYGKKTLGLSDRAMEACLHYQWPGNIRELENALERGVILTESNESINVESLFPGLATATEGDRLSSEGRLEEESGDSWFRQIIDQGVSLEDLEAGLMRTAMDRCGQNISQAARLLGLTRPAMAYRLKKLDPSLSVKAMGR

Annotated regions:
phrase: SLEDLEAGLMRTAMDRCGQNISQAARLLGLTRPAMAYRLKK
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: WPGNIRELE
type: CONSERVED_SITE
name: Sigma_54_int_dom_CS
description: Sigma-54 interaction domain, conserved site

phrase: GRFERANGGTIFLDE
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_2
description: Sigma-54 interaction domain, ATP-binding site 2

phrase: GRVSVLLLGETGVGKEVIARSVHLRSERAEQPFVAVNCAAIPPDLIESELFGVDKGAYTGAVNARAGRFERANGGTIFLDEVIELTPRAQATLLRVLQEGELERVGGDRTRKVDVRLITATNENLEEAVKMGRFRADLFFRLNV
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: DLSSQIRFVAAEGKIWLGEQRMLVMQLSTLASFRREIISLIGVERAKGFFLRLGYQSGLMDAELARKLRPAMREEEVFLAGPQLYALKGMVKVRLLTM
type: DOMAIN
name: XylR_N
description: Activator of aromatic catabolism

phrase: IGHSPAYKRICETIDKAARGRVSVLLLGETGVGKEVIARSVHLRSERAEQPFVAVNCAAIPPDLIESELFGVDKGAYTGAVNARAGRFERANGGTIFLDEVIELTPRAQATLLRVLQEGELERVGGDRTRKVDVRLITATNENLEEAVKMGRFRADLFFRLNVFP
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: GLMRTAMDRCGQNISQA
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: ARLLGLTRPAMAYRLKKLDP
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: EWIDSFEVDICRTELGLMNEPVCWTVLGYASGYGSAFMGRRIIFQETSCRGCGDDKCLIVGK
type: DOMAIN
name: V4R
description: 4-vinyl reductase, 4VR

phrase: GIGHSPAYKRICETIDKAARGRVSVLLLGETGVGKEVIARSVHLRSERAEQPFVAVNCAAIPPDLIESELFGVDKGAYTGAVNARAGRFERANGGTIFLDEVIELTPRAQATLLRVLQEGELERVGGDRTRKVDVRLITATNENLEEAVKMGRFRADLFFRLNVFPVHIPPLRERVEDIPLLVEHFLRRHHKEYGKKTLGLSDRAMEACLHYQWPGNIRELENALERGV
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: LGLMNEPVCWTVLGYASGYGSAFMGRRIIFQETSCRGCGDDKCLIVG
type: DOMAIN
name: V4R
description: 4-vinyl reductase, 4VR

phrase: VLLLGETGVGKEV
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_1
description: Sigma-54 interaction domain, ATP-binding site 1
Protein sequence:
MSRAKFERKKPHVNIGTIGHVDHGKTTLTAAITMTLAAAGGSVGKKYDEIDSAPEEKARGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNVVVFLNKEDQVDDKELLELVELEVRETLDKYEFPGDEIPVVPGSALLALEALIENPKTQRGENKWVDKIYQLMDNVDSYIPTPQRETDKPFLLAVEDVLSITGRGTVATGRVERGALRISDNVEIVGLRPTQTAVVTGLEMFKKTLDETLAGDNVGVLLRGVQKKDIERGMVIAKPGTITPHTKFEAQVYVLTKEEGGRHSAFMIGYQPQFYVRTTDVTGKVVGFNHIQMRNPSSVAEEHSNKMAMPGDRISMTVELINPIAIEKGMRFAIREGGRTVGAGVVTNIVQ

Annotated regions:
phrase: NIGTIGHVDHGKT
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: ARGITINT
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: AHVDCPGHAD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: TGAAQMDGAIL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: VVVFLNKED
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: TITPHTKFEAQVYVLTKEEGGRHSAFMIGYQPQFYVRTTDVTGKVVGFNHIQMRNPSSVAEEHSNKMAMPGDRISMTVELINPIAIEKGMRFAIREGGRTVGAGVVTN
type: DOMAIN
name: Transl_elong_EFTu/EF1A_C
description: Translation elongation factor EFTu/EF1A, C-terminal

phrase: VNIGTIGHVDHGKTTLTAAITMTLAAAGGSVGKKYDEIDSAPEEKARGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNVVVFLNKEDQVDDKELL
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: KPHVNIGTIGHVDHGKTTLTAAITMTLAAAGGSVGKKYDEIDSAPEEKARGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNVVVFLNKEDQVDDKELLELVELEVRETLDKYEFPGDEIPVVPGSALLALEALIENPKTQRGENKWVDKIYQLMDNVDSYIPTP
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: FLLAVEDVLSITGRGTVATGRVERGALRISDNVEIVGLRPTQTAVVTGLEMFKKTLDETLAGDNVGVLLRGVQKKDIERGMVIAKP
type: DOMAIN
name: EFTU_2
description: Elongation factor Tu, domain 2

phrase: DSAPEEKARGITINT
type: CONSERVED_SITE
name: G_TR_CS
description: Tr-type G domain, conserved site

phrase: PHVNIGTIGHVDHGKTTLTAAITMTLAAAGGSVGKKYDEIDSAPEEKARGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNVVVFLNKEDQVDDKELLELVELEVRETLDKYEFPGDEIPVVPGSALLALEALIENPKTQRGENKWVDKIYQLMDNVDSYIPT
type: DOMAIN
name: EF-Tu_GTP-bd
description: Elongation factor Tu (EF-Tu), GTP-binding domain

phrase: KPHVNIGTIGHVDHGKTTLTAAITMTLAAAGGSVGKKYDEIDSAPEEKARGITINTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNVVVFLNKEDQVDDKELLELVELEVRETLDKYEFPGDEIPVVPGSALLALEALIENPKTQRGENKWVDKIYQLMDNVDSYI
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: GTVATGRVERGALRISDNVEIVGLRPTQTAVVTGLEMFKKTLDETLAGDNVGVLLRGVQKKDIERGMVI
type: DOMAIN
name: EFTu-like_2
description: Translation elongation factor EFTu-like, domain 2
Protein sequence:
MKHKVGILGGTFDPPHLAHLQMAEVAKQQLNLEKVLFLPNKIPPHKHISGMASNDARVEMLRLMIEGIDYFEVDLRELKRAGKSYTYDTMRDMISEQPNTDFYFIIGGDMVEYLPKWYHIEDLVKMVTFVGVHRPHYQAEVPYDVVNIDMPETTISSTEIRNNIEHAEAFLPEKVWLYIKEHQLYGKK

Annotated regions:
phrase: VGILGGTFDPPHLAHLQMAEVAKQQLNLEKVLFLPNKIPPHKHISGMASNDARVEMLRLMIEG
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: ILGGTFDPPHLAHLQMAEVAKQQLNLEKVLFLPNKIPPHKHISGMASNDARVEMLRLMIEGIDYFEVDLRELKRAGKSYTYDTMRDMISEQPNTDFYFIIGGDMVEYLPKWYHIEDLVKMVTFVGVHRPHYQAEVPYDVVNIDMPETTISSTEIR
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain
Protein sequence:
MTSVAKVYYSQTTQTESRPLVAPGIRRRRVLTKDGRSNVRMEHIADKRFLYLKDLWTTFIDMQWRYKLLLFSATFAGTWFLFGVVWYLVAVAHGDLLELGPPANHTPCVVQVHTLTGAFLFSLESQTTIGYGFRYISEECPLAIVLLIAQLVLTTILEIFITGTFLAKIARPKKRAETIRFSQHAVVAYHNGKLCLMIRVANMRKSLLIGCQVTGKLLQTHQTKEGENIRLNQVNVTFQVDTASDSPFLILPLTFYHVVDETSPLKDLPLRSGEGDFELVLILSGTVESTSATCQVRTSYLPEEILWGYEFTPAISLSASGKYVADFSLFDQVVKVASPGGLRDSTVRYGDPEKLKLEESLREQAEKEGSALSVRISNV

Annotated regions:
phrase: IRFSQHAVVAYHNGKLCLMIRVANMRKSLLIGCQVTGKLLQTHQTKEGENIRLNQVNVTFQVDTASDSPFLILPLTFYHVVDETSPLKDLPLRSGEGDFELVLILSGTVESTSATCQVRTSYLPEEILWGYEFTPAISLSASGKYVADFSLFDQVVKVAS
type: DOMAIN
name: IRK_C
description: Inward rectifier potassium channel, C-terminal

phrase: TKDGRSNVRMEHIADKRFLYLKDLWTTFIDMQWRYKLLLFSATFAGTWFLFGVVWYLVAVAHGDLLELGPPANHTPCVVQVHTLTGAFLFSLESQTTIGYGFRYISEECPLAIVLLIAQLVLTTILEIFITGTFLAKIAR
type: DOMAIN
name: Kir_TM
description: Potassium channel, inwardly rectifying, transmembrane domain
Protein sequence:
MYHIISIRDFERSDLDYLLDRAQEFDTGKYRPGMLDDKLVALLFFEPSTRTRMSFATAMARLGGRSISVDSVEASSIVKGETLADTIRVVSGYADAIVLRHPKEGAARLASEFATVPVINAGDGAGQHPSQTLLDLYTIRQSMPVDGIDVGLLGDLRYGRTAHSLALALSLYGVTLHTIAPVGLEMPANIALELRERGMEVVEHPNVEEAIRELDVLYVTRIQRERFPDSASYYNVASSYRITTDLLDGVKERLMILHPLPRAGEIDPAVDRTPYARYFEQARNGVPIRMALLHEVMK

Annotated regions:
phrase: HIISIRDFERSDLDYLLDRAQEFDTGKYRPGMLDDKLVALLFFEPSTRTRMSFATAMARLGGRSISVDSVEASSIVKGETLADTIRVVSGYADAIVLRHPKEGAARLASEFATVPVINAGDGAGQHPSQTLLDLYTIR
type: DOMAIN
name: Asp/Orn_carbamoyltranf_P-bd
description: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding

phrase: DGIDVGLLGDLRYGRTAHSLALALSLYGVTLHTIAPVGLEMPANIALELRERGMEVVEHPNVEEAIRELDVLYVTRIQRERFPDSASYYNVASSYRITTDLLDGVKERLMILHPLPRAGEIDPAVDRTPYARYFEQARNGVPIRMALL
type: DOMAIN
name: Asp_carbamoyltransf_Asp/Orn-bd
description: Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain
Protein sequence:
MAGLKRRVPLHSLRYFISMVGLFSKPGLLPWYARNPPGWSQLFLGTVCKGDFTRVIATKCQKGQKSQKKPSHLGPLDGSWQERLADVVTPLWRLSYEEQLKVKFAAQKKILQRLESYIQMLNGVSVTTAVPKSERLSCLLHPIIPSPVINGYRNKSTFSVNRGPDGNPKTVGFYLGTWRDGNVVCVQSNHLKNIPEKHSQVAQYYEVFLRQSPLEPCLVFHEGGYWRELTVRTNSQGHTMAIITFHPQKLSQEELHVQKEIVKEFFIRGPGAACGLTSLYFQESTMTRCSHQQSPYQLLFGEPYIFEELLSLKIRISPDAFFQINTAGAEMLYRTVGELTGVNSDTILLDICCGTGVIGLSLAQHTSRVLGIELLEQAVEDARWTAAFNGITNSEFHTGQAEKILPGLLKSKEDGQSIVAVVNPARAGLHYKVIQAIRNFRAIHTLVFVSCKLHGESTRNVIELCCPPDPAKKLLGEPFVLQQAVPVDLFPHTPHCELVLLFTR

Annotated regions:
Protein sequence:
MSNLTVITHPLVQHKLTLMRRKDASSNSFRRLLGELSQLMAYEVTRDMPLSPVQIETPLETMTGQMIDGKKLVLVSILRAGNGFLDGMLNVVPGARVGHIGLYRDPATLQAVEYYFKMPAGIDERDTIVVDPMLATGNSAVACMARLKQLKPRSIKFVCLLAVPEGIARLQQAHPDVSIFTAAIDRELNEHGYILPGLGDAGDRIFGTK

Annotated regions:
phrase: GKKLVLVSILRAGNGFLDGMLNVVPGARVGHIGLYRDPATLQAVEYYFKMPAGIDERDTIVVDPMLATGNSAVACMARLKQLKPRSIKFVCLLAVPEGIARLQQAHPDVSIFTAA
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: VITHPLVQHKLTLMRRKDASSNSFRRLLGELSQLMAYEVTRDMPLSPVQIETPLETMTGQMIDGKKLVLVSILRAGNGFLDGMLNVVPGARVGHIGLYRDPATLQAVEYYFKMPAGIDERDTIVVDPMLATGNSAVACMARLKQLKPRSIKFVCLLAVPEGIARLQQAHPDVSIFTAAIDRELNEHGYILPGLGDAGDRIFG
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain
Protein sequence:
MLDKSRLRIAMQKSGRLSKESQKLLEQCGIKINLQQQQLLAFAENMTIDIMRVRDDDIPGLIMDGVVDLGIIGENVLEEALLTRQSQGDNPCYVTLRRLDFGDCRLSMALPMDKPWNGPKCLQGKRIATSYPHLLKQYLDKLGINFKSCLLNGSVEVAPRAGLADAICDLVSTGATLEANGLREVEVIYRSKACLIQRSGNLSKTKQSLIDKLMIRIQGVIQARESKYIMLHAPAERLEEIINLLPGAESPTVLPLAGNQHRVAIYMVSNEALFWETMENLKNLGASSILVLPIEKMME

Annotated regions:
phrase: EVAPRAGLADAICDLVSTGAT
type: CONSERVED_SITE
name: ATP_PRibTrfase_CS
description: ATP phosphoribosyltransferase, conserved site

phrase: LSKTKQSLIDKLMIRIQGVIQARESKYIMLHAPAERLEEIINLLPGAESPTVLPLAGNQHRVAIYMVSNEALFWETMENLKNLGASSILVLPIEKM
type: DOMAIN
name: HisG_C
description: Histidine biosynthesis HisG, C-terminal

phrase: RDDDIPGLIMDGVVDLGIIGENVLEEALLTRQSQGDNPCYVTLRRLDFGDCRLSMALPMDKPWNGPKCLQGKRIATSYPHLLKQYLDKLGINFKSCLLNGSVEVAPRAGLADAICDLVSTGATLEANGLREVEVIYRSKACLIQRSGNLSKTKQSLIDKLMIRIQ
type: DOMAIN
name: ATP_PRibTrfase_cat
description: ATP phosphoribosyltransferase, catalytic domain

phrase: ARESKYIMLHAPAERLEEIINLLPGAESPTVLPLAGNQHRVAIYMVSNEALFWETMENLKNLGASSILVLPIE
type: DOMAIN
name: HisG_C
description: Histidine biosynthesis HisG, C-terminal

phrase: LRIAMQKSGRLSKESQKLLEQCGIKINLQQQQLLAFAENMTIDIMRVRDDDIPGLIMDGVVDLGIIGENVLEEALLTRQSQGDNPCYVTLRRLDFGDCRLSMALPMDKPWNGPKCLQGKRIATSYPHLLKQYLDKLGINFKSCLLNGSVEVAPRAGLADAICDLVSTGATLEANGLREVEVIYRSKACLI
type: DOMAIN
name: ATP_PRibTrfase_cat
description: ATP phosphoribosyltransferase, catalytic domain
Protein sequence:
MPGVDISFLKKSGRRTMAAAAVIALLGGCGADAGSEPATTAASTTAPSAATDAATAEFAALEQRFGARLGVYAVDTTSGAVVAYRADERFGMASTFKGLACGALLREHPLSSGYFDQVVRYSREEVVSYSPVTETRVDTGMTVAELCHATITVSDNTAGNQILKLLGGPAGFTAFLRSLGDEVSRLDRWETELNEVPPGEERDTTTPAAVAANYRALVLGDVLAEPERAQLRDWLVANTTGDQRIRAGVPAGWTVGDKTGGGSHGGNNDVAVAWTETGDPIVIALLSHRTDPAAKADNALLAEATRAVVTALR

Annotated regions:
phrase: FGMASTFKGLACGAL
type: ACTIVE_SITE
name: Beta-lactam_class-A_AS
description: Beta-lactamase, class-A active site

phrase: GVYAVDTTSGAVVAYRADERFGMASTFKGLACGALLREHPLSSGYFDQVVRYSREEVVSYSPVTETRVDTGMTVAELCHATITVSDNTAGNQILKLLGGPAGFTAFLRSLGDEVSRLDRWETELNEVPPGEERDTTTPAAVAANYRALVLGDVLAEPERAQLRDWLVANTTGDQRIRAGVPAGWTVGDKTGGGSHGGNNDVAVAWTETGDPIVIAL
type: DOMAIN
name: Beta-lactam_cat
description: Beta-lactamase class A, catalytic domain
Protein sequence:
MPFIPNTDADRATMLQAVGASTFDDLISNIPEKVRFKGALNLPEALSEMEVLEELNALANANQDTQKVTSFLGGGAYDHFVPSAIGAIISRSEFYTAYTPYQAEVSQGTLQAMYEFQTMVARLTGMDVANASMYDGATALAEAMLLSVAHKNRKEVVLAGKINPNAVAIMQTYGHGQEIHIRQSALENGGADLASVRELVSDKTAAMIVQHPNFFGCLEDVHELQKIAAENNALFIVSADPISLGILEAPGNYGADIVVGEGQGLGNTQSFGGPYLGLFAAKSQLLRKIPGRLSGMTVDKDGNQGFILTLQTREQHIRREKATSNICTNQALNALCACIYMSMMGKEGLTQVASLSIQKAHYLANEIQKLDGFKLKFSRPFFKEFAIELPIPASQAIAKLLEKKIHAGVDLKMAEENGLLIAVTEKRSKAEMNSFVEALKELC

Annotated regions:
phrase: FIPNTDADRATMLQAVGASTFDDLISNIPEKVRFKGALNLPEALSEMEVLEELNALANANQDTQKVTSFLGGGAYDHFVPSAIGAIISRSEFYTAYTPYQAEVSQGTLQAMYEFQTMVARLTGMDVANASMYDGATALAEAMLLSVAHKNRKEVVLAGKINPNAVAIMQTYGHGQEIHIRQSALENGGADLASVRELVSDKTAAMIVQHPNFFGCLEDVHELQKIAAENNALFIVSADPISLGILEAPGNYGADIVVGEGQGLGNTQSFGGPYLGLFAAKSQLLRKIPGRLSGMTVDKDGNQGFILTLQTREQHIRREKATSNICTNQALNALCACIYMSMMGKEGLTQVASLSIQKAHYLANEIQKLDGFKLKFSRPFFKEFAIELPIPASQAIAKLLEKKIHAGVDLKMAEENGLLIAVTEKRSKAEMNSFVE
type: DOMAIN
name: GDC-P_N
description: Glycine cleavage system P-protein, N-terminal domain
Protein sequence:
MSYTITAQTRTEIGKGSSRRLRHAGKVPAVIYGAGKEAVSIEFEHRSIINIQTNDDFYNSDITIVLDGKEVKVRVQAMQRHAFKPMIEHVDFKFA

Annotated regions:
phrase: TITAQTRTEIGKGSSRRLRHAGKVPAVIYGAGKEAVSIEFEHRSIINIQTNDDFYNSDITIVLDGKEVKVRVQAMQRHAFKPMIEHVD
type: DOMAIN
name: Ribosomal_L25_dom
description: Large ribosomal subunit protein bL25, L25 domain

phrase: ITAQTRTEIGKGSSRRLRHAGKVPAVIYGAGKEAVSIEFEHRSIINIQTNDDFYNSDITIVLDGKEVKVRVQAMQRHAFKPMIEHVD
type: DOMAIN
name: Ribosomal_L25_dom
description: Large ribosomal subunit protein bL25, L25 domain
Protein sequence:
MVKETKRMIQAKKGIELECKGWEQEAVLRMLYNNLDPEVAEKPDELIVYGGIGKAARNWAAFEAIVEQLRTLEKDETLLIQSGKPVGRFKTHEQAPRVLLSNSVLVPKWAHWEHFNELEKQGLMMYGQMTAGSWIYIGSQGILQGTYETFAELARQHFGGSLKGTLTLTAGLGGMGGAQPLAVTMNGGVVIGVDVDRSRIEKRIATKYTDRITESLDQALAWASEAKAKGEPLSIGLVGNAAHLHHEILQRGVEVDVVTDQTSAHDPLNGYIPEGHSLEGAELLRKENPQRYMALAKQSMKKHVEAMLAFQRRGAIVFDYGNNIRQVAKDEGLEEAFAFPGFVPAYIRPLFCEGKGPFRWAALSGDPEDIYRTDRLIKELFPENEALIRWIDIAQEKVTFQGLPARICWLGYGERMKMGLEINRLVRNGELKAPIVIGRDHLDCGSVASPNRETEAMKDGSDAVGDWAILNALINTAAGGSWISVHHGGGVGMGYSLHAGMVVVADGTENAEKRLRRVLTTDPGMGIIRHADAGYELAKQVAREKGVMIPMEDKNEEGV

Annotated regions:
phrase: GSQGILQGTYETFAELARQHFGGSLKGTLTLTAGLGGMGGAQPLAVTMNGGVVIGVDVDRSRIEKRIATKYTDRITESLDQALAWASEAKAKGEPLSIGLVGNAAHLHHEILQRGVEVDVVTDQTSAHDPLNGYIPEGHSLEGAELLRKENPQRYMALAKQSMKKHVEAMLAFQRRGAIVFDYGNNIRQVAKDEGLEEAFAFPGFVPA
type: DOMAIN
name: Urocanase_Rossmann-like
description: Urocanase, Rossmann-like domain

phrase: RDHLDCGSVASPNRE
type: CONSERVED_SITE
name: Urocanase_CS
description: Urocanase conserved site

phrase: PLFCEGKGPFRWAALSGDPEDIYRTDRLIKELFPENEALIRWIDIAQEKVTFQGLPARICWLGYGERMKMGLEINRLVRNGELKAPIVIGRDHLDCGSVASPNRETEAMKDGSDAVGDWAILNALINTAAGGSWISVHHGGGVGMGYSLHAGMVVVADGTENAEKRLRRVLTTDPGMGIIRHADAGYELAKQVA
type: DOMAIN
name: Urocanase_C
description: Urocanase, C-terminal domain

phrase: IQAKKGIELECKGWEQEAVLRMLYNNLDPEVAEKPDELIVYGGIGKAARNWAAFEAIVEQLRTLEKDETLLIQSGKPVGRFKTHEQAPRVLLSNSVLVPKWAHWEHFNELEKQGLMMYGQMTAGSW
type: DOMAIN
name: Urocanase_N
description: Urocanase, N-terminal domain
Protein sequence:
MSTSDSIVSSQTKQSSWRKSDTTWTLGLFGTAIGAGVLFFPIRAGFGGLIPILLMLVLAYPIAFYCHRALARLCLSGSNPSGNITETVEEHFGKTGGVVITFLYFFAICPLLWIYGVTITNTFMTFWENQLGFAPLNRGFVALFLLLLMAFVIWFGKDLMVKVMSYLVWPFIASLVLISLSLIPYWNSAVIDQVDLGSLSLTGHDGILITVWLGISIMVFSFNFSPIVSSFVVSKREEYEKDFGRDFTERKCSQIISRASMLMVAVVMFFAFSCLFTLSPANMAEAKAQNIPVLSYLANHFASMTGTKTTFAITLEYAASIIALVAIFKSFFGHYLGTLEGLNGLILKFGYKGDKTKVSLGKLNTLSMIFIMGSTWVVAYANPNILDLIEAMGAPIIASLLCLLPMYAIRKAPSLAKYRGRLDNVFVTVIGLLTILNIVYKLF

Annotated regions: