nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDYAAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNPLDAMVWALQKFSGLPAHKVVGMAGVLDSARFRYFLSEEFNVSVEDVTAFVLGGHGDSMVPLARYSTVAGIPLSDLVKMGWTSQDKLDKIIQRTRDGGAEIVGLLKTGSAFYAPAASAIQMAESYLKDKKRVLPVAAQLSGQYGVKDMYVGVPTVIGANGVERIIEIDLDKDEKAQFDKSVASVAGLCEACIGIAPSLK

Annotated regions:
phrase: KIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDYAAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNPLDAMVWALQKFSGLPAHKVV
type: DOMAIN
name: Lactate/malate_DH_N
description: Lactate/malate dehydrogenase, N-terminal

phrase: LDSARFRYFLSEEFNVSVEDVTAFVLGGHGDSMVPLARYSTVAGIPLSDLVKMGWTSQDKLDKIIQRTRDGGAEIVGLLKTGSAFYAPAASAIQMAESYLKDKKRVLPVAAQLSGQYGVKDMYVGVPTVIGANGVERIIEIDLDKDEKAQFDKSV
type: DOMAIN
name: Lactate/malate_DH_C
description: Lactate/malate dehydrogenase, C-terminal
Protein sequence:
MMDSMIIGKYVPGTSLVHRLDPRTKLITIFLFVCIVFLANNVQTYALLGLFTIGVVSLTRVPFSFLMKGLKPIIWIVLFTFLLHILMTHEGPIIFQIGFFKVYEGGLVQGIFISLRFVYLILITTLLTLTTTPIEITDGMEQLLNPLKKLKLPVHELALMMSISLRFIPTLMEETDKIMKAQMARGVDFTSGPVKERVKAIVPLLVPLFVSAFKRAEELAVAMEARGYQGGEGRTKYRKLVWTGKDTSVIVSLIVLAALLFFLRA

Annotated regions:
Protein sequence:
MKLLEERILKDGDVLGENILKVDSFLTHQVDFELMQEIGKVFADKYKEAGITKVVTIEASGIAPAVYAAQALGVPMIFAKKAKNITMTEGILTAEVYSFTKQVTSQVSIVSRFLSNDDTVLIIDDFLANGQAAKGLLEIIGQAGAKVAGIGIVIEKSFQDGRDLLEKTGVPVTSLARIKAFENGRVVFAEADA

Annotated regions:
phrase: IGKVFADKYKEAGITKVVTIEASGIAPAVYAAQALGVPMIFAKKAKNITMTEGILTAEVYSFTKQVTSQVSIVSRFLSNDDTVLIIDDFLANGQAAKGLLEIIGQAGAKVAGIGIVIEKSFQDGRDLLEKTGVPVTSL
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: MQEIGKVFADKYKEAGITKVVTIEASGIAPAVYAAQALGVPMIFAKKAKNITMTEGILTAEVYSFTKQVTSQVSIVSRFLSNDDTVLIIDDFLANGQAAKGLLEIIGQAGAKVAGIGIVIEK
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain
Protein sequence:
MSGGLSRRRVAAASSDEERPEMRSVSHSKSHLEGYDDDHKIAFDPKDLEQGAEREKQPRLTLMEEVLLLGLKDKQGYLSFWNDSISYSLRGCILMELAFRGKLRMQKDVNRKRFPLADRVVELVDEKLTGEVLLDEAIKMIHTSELMSVTSWIDLMSGETWNVMKIGYQLRQVRERLAKGLVDKGILRNEKKNFLLFDMPTHPIADTSIKDSIKKRVVSVLTSRVIEIDNSPSFPEYLSFRCLRTVALACSSYAANVLENALDNLNYEDREKAFSRVDELLCDFSQWPFDLHASSSVGANLPELISEELSSVKEEQLLFIEVVAAVLQVFTHLDSLL

Annotated regions:
Protein sequence:
MKKVFILLALKYYILNSIIRNGENLYKKIVIPTDGSDVSLEAAKHAINIAKEFDAEVYAIYVVDVSPFVGLPAEGSWELISELLKEEGQEALKKVKKMAEEWGVKIHTEMLEGVPANEIVEFAEKKKADLIVMGTTGKTGLERILLGSVAERVIKNAHCPVLVVKKPKKE

Annotated regions:
phrase: YKKIVIPTDGSDVSLEAAKHAINIAKEFDAEVYAIYVVDVSPFVGLPAEGSWELISELLKEEGQEALKKVKKMAEEWGVKIHTEMLEGVPANEIVEFAEKKKADLIVMGTTGKTGLERILLGSVAERVIKNAHCPVLVV
type: DOMAIN
name: UspA
description: UspA
Protein sequence:
MAPITLSQIDEDLKDVIQTFFEIQSAVHGYLGPETQQELVKKLKSLTVSLQTLSAHAAPDPSYVQSPPSRTGLSPADPPVQSIQLPPEIIDYVDAARNPDIYTREFVELVQKSNQELKGKMEAFASFRDVLAKEMASAMPECKKEVERVVKATGGSVDGGGCG

Annotated regions:
Protein sequence:
MKVGINGFGRIGRQVFRILHSRGVEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAKGEDITIVMGVNHEAYDPSRHHIISNASCTTNSLAPVMKVLEEAFGVEKALMTTVHSYTNDQRLLDLPHKDLRRARAAAINIIPTTTGAAKATALVLPSLKGRFDGMALRVPTATGSISDITALLKREVTAEEVNAALKAAAEGPLKGILAYTEDEIVLQDIVMDPHSSIVDAKLTKALGNMVKVFAWYDNEWGYANRVADLVELVLRKGV

Annotated regions:
phrase: MKVGINGFGRIGRQVFRILHSRGVEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKEIPWAEAGVGVVIESTGVFT
type: DOMAIN
name: GlycerAld_3-P_DH_NAD(P)-bd
description: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain

phrase: LAPVMKVLEEAFGVEKALMTTVHSYTNDQRLLDLPHKDLRRARAAAINIIPTTTGAAKATALVLPSLKGRFDGMALRVPTATGSISDITALLKREVTAEEVNAALKAAAEGPLKGILAYTEDEIVLQDIVMDPHSSIVDAKLTKALGNMVKVFAW
type: DOMAIN
name: GlycerAld_3-P_DH_cat
description: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain

phrase: MKVGINGFGRIGRQVFRILHSRGVEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKEIPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPAKGEDITIVMGVNHEAYDPSRHHIISNAS
type: DOMAIN
name: GlycerAld_3-P_DH_NAD(P)-bd
description: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain

phrase: ASCTTNS
type: ACTIVE_SITE
name: GlycerAld_3-P_DH_AS
description: Glyceraldehyde 3-phosphate dehydrogenase, active site
Protein sequence:
MLKGIHKYLLMCFGTVLFTVQANAARIMSNNPIKEDWQCKVVDGEWSCKRAKKPKSVFDKKLTKTEKEKALADDLAWVKKPSYFVGGYYSNDSQFTKALCESKKTDLSYEKSEFDNDGTLIASGNVQVLQCDQELYGNNAIINLNSNNSAIRSLVMAGDVIVKQPSTGIVIRTTELDADMNDGTYSTGEAYFRLAREMPKTRIYDKEHFSGYLRGYAKTFKKESSGDIVLSDGYITSGDPYDNAWKITGNNIDIDTNTHMAYVKNGYFEIQDIPVMYIPYFSHPIDDRRRSGFLYPGFVQNANSGIGISVPYYFNLAPNYDLMLQSVIWSQRGIMENGTFRYMTKYFQGQFEGSLVPYDFKEGKMRGSFTLSTTGQYENINTNFKYEYVSDQNYYNDFSAGNVNLVTKTLLDREFDLTYTNDYVDSGLTVLDYGVVNPLLTVDNTPYAKLPEVKLNLTSDGYTPDYLTLSAQTLNTFFYKTAGPANTNPGAPQGTNVNAFRAYESPKIAFNFNKTWGYLNPSLEVPIRYYQLKNSPTDTIQFANSSVTSVLPIFNIDAGAYFDKDYTNENGTYTSTLHPRLFYTYIPYQDQTNIPLFDTSLQNEQYMQMFQVNRFTGYDRINNANQLTYALEASTTNQEDGTTLASAKIGQMAYFADRKVNLCQGNSACPNPGLMDPFSTDTFSPIMTSFEFQVMKNIYLSAQVNYRVKQQNVDYQVYQLSYKDENENIFNVSYNNIANNWSSLTQQQIAEGAKPQPQETITLSTILNITDHWGIAALWNYNFQQKQIANIFAGLQYNAKSWAVRALWQKTAYTNQDPNNPTLLGPLVNTYMFEFELKGLGGIGNTSDISSRLQQINGYQVGEWGDGI

Annotated regions:
phrase: KMRGSFTLSTTGQYENINTNFKYEYVSDQNYYNDFSAGNVNLVTKTLLDREFDLTYTNDYVDSGLTVLDYGVVNPLLTVDNTPYAKLPEVKLNLTSDGYTPDYLTLSAQTLNTFFYKTAGPANTNPGAPQGTNVNAFRAYESPKIAFNFNKTWGYLNPSLEVPIRYYQLKNSPTDTIQFANSSVTSVLPIFNIDAGAYFDKDYTNENGTYTSTLHPRLFYTYIPYQDQTNIPLFDTSLQNEQYMQMFQVNRFTGYDRINNANQLTYALEASTTNQEDGTTLASAKIGQMAYFADRKVNLCQGNSACPNPGLMDPFSTDTFSPIMTSFEFQVMKNIYLSAQVNYRVKQQNVDYQVYQLSYKDENENIFNVSYNNIANNWSSLTQQQIAEGAKPQPQETITLSTILNITDH
type: DOMAIN
name: LptD_C
description: LptD, C-terminal

phrase: DNDGTLIASGNVQVLQCDQELYGNNAIINLNSNNSAIRSLVMAGDVIVKQPSTGIVIRTTELDADMNDGTYSTGEAYFRLAREMPKTRIYDKEHFSGYLRGYAKTFKKESSGDIVLSDGYITSGDPYDNAWKITGNNIDIDTN
type: DOMAIN
name: OstA-like_N
description: Organic solvent tolerance-like, N-terminal
Protein sequence:
MDKLQRDGKEDTPRQRRFLYPLLFQEDLYAIAYDHYFNRSSSFEPMENSSSNDRFSFLTVKRLISRIRQQNGSIVPFVNCDQTQLVGHNRSFYSELVLGGLTAVPEVPFSIRSKHSLERMNEWTSFRSIHSIFPLMEDKIPHSNFILDIRIPHLTHPEILVRTFRRWIQDAPSLHSLRSVLHEHRNLIISSNLDQLILIASKENTRLSLFLWNYYAYECESLLVPLWKRFSYSRSLPYESFIERTPFYRKIEHIVIFYHKYLKKSLWFLKDPSIHYVKHRERSIIALRGTYLLAKKWRYHITNFWQCHFHLWPQPYRIYIDELSNNWFSFLGYLLSVKMKTSVVRIKMLDDSFITDLITKKFDPIAPTTLLIGSLAKEKFCDISGHPISRLAWTGLTDDDILDRFDQIWRNIFHYHSGSSKKDGLYRIKYILRLPCAKTLACKHKSAIRVVRERFGSELFTKSSPKERESIFLSFSKTRSQRERIWHSDIIQRNPLINSCRKKHN

Annotated regions:
phrase: MDKLQRDGKEDTPRQRRFLYPLLFQEDLYAIAYDHYFNRSSSFEPMENSSSNDRFSFLTVKRLISRIRQQNGSIVPFVNCDQTQLVGHNRSFYSELVLGGLTAVPEVPFSIRSKHSLERMNEWTSFRSIHSIFPLMEDKIPHSNFILDIRIPHLTHPEILVRTFRRWIQDAPSLHSLRSVLHEHRNLIISSNLDQLILIASKENTRLSLFLWNYYAYECESLLVPLWKRFSYSRSLPYESFIERTPFYRKIEHIVIFYHKYLKKSLWFLKDPSIHYVKHRERSIIALRGTYLLAKKWRYHITNFWQCHFHLWPQPYRIYIDELSNNWFSFL
type: DOMAIN
name: Maturase_MatK_N
description: Maturase MatK, N-terminal domain

phrase: KKFDPIAPTTLLIGSLAKEKFCDISGHPISRLAWTGLTDDDILDRFDQIWRNIFHYHSGSSKKDGLYRIKYILRLPCAKTLACKHKSAIRVVRERFGSELFTKSSPKERESIFLSFS
type: DOMAIN
name: Domain_X
description: Domain X
Protein sequence:
MAVCAGIKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLRLECGPKYPEAPPTVRFVTKMNMNGINNSNGTVDYRSIPVLAKWQNSFSIKVLLQELRRLMMSKENMKLPQPPEGQTYNN

Annotated regions:
phrase: PRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLRLECGPKYPEAPPTVRFVTKMNMNGINNSNGTVDYRSIPVLAKWQNSFSIKVLLQELRRLMMSKENMKLPQPPEGQTYN
type: DOMAIN
name: UBQ-conjugat_E2_core
description: Ubiquitin-conjugating enzyme E2, catalytic core domain

phrase: EDDEDMTLTRWTGMIIGPPRTNYENRIYSLRLECGPKYPEAPPTVRFVTKMNMNGINNSNGTVDYRSIPVLAKWQNSFSIKVLLQELRRLMMSKENM
type: DOMAIN
name: UBQ-conjugat_E2_core
description: Ubiquitin-conjugating enzyme E2, catalytic core domain
Protein sequence:
MTRIIVVTSGKGGVGKTTSSAAIGTGLAQKGKKTIVIDFDIGLRNLDLIMGCERRVVYDFINVIQGDATLNQAIIKDKKTNNLFILPASQTRDKDALTRIGVEKVLTELIKMNFDFIICDSPAGIETGAILAIYFADEAIITTNPEVSSVRDSDRILGIISSKSKRAEKNITPIKEYLLLTRYNPRRVKKGEMLSMTDVLDILQIPIIGVIPEDQSVLRASNQGESIILDINSNAGCAYSDTVNRLLGEERHFRFIEEEKKSFLRRLFGR

Annotated regions:
phrase: TRIIVVTSGKGGVGKTTSSAAIGTGLAQKGKKTIVIDFDIGLRNLDLIMGCERRVVYDFINVIQGDATLNQAIIKDKKTNNLFILPASQTRDKDALTRIGVEKVLTELIKMNFDFIICDSPAGIETGAILAIYFADEAIITTNPEVSSVRDSDRILGIISSKSKRAEKN
type: DOMAIN
name: AAA_dom
description: AAA domain
Protein sequence:
MSRYRGPRFKKIRRLGALPGLTNKRPRAESDLRNQSRSGKKSQYCIRLEEKQKLRFHYGLTERQLIQYVRIARKAKGSTGQVLLQLLEMRLDNILFRLGMASTIPAARQLVNHRHILVNGRIVDIPSYRCKPRDIITSKDNQKSRALIQNSLESSPHEELPNHLALDPSPYYKGLVNQIIDTKWVGLKINEFLVIEYYSRQTN

Annotated regions:
phrase: RYRGPRFKKIRRLGALPGLTNKRPRAESDLRNQSRSGKKSQYCIRLEEKQKLRFHYGLTERQLIQYVRIARKAKGSTGQVLLQLL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: MRLDNILFRLGMASTIPAARQLVNHRHILVNGRIVDIPSYRCKPRDIITSKDNQKSRALIQNSL
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: RYRGPRFKKIRRLGALPGLTNKRPRAESDLRNQSRSGKKSQYCIRLEEKQKLRFHYGLTERQLIQYVRIARKAKGSTGQVLLQLL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: LEMRLDNILFRLGMASTIPAARQL
type: CONSERVED_SITE
name: Ribosomal_uS4_CS
description: Small ribosomal subunit protein uS4, conserved site

phrase: MRLDNILFRLGMASTIPAARQLVNHRHILVNGRIVDIPSYRCKPRDI
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain
Protein sequence:
MLARRIIPCLDVKDGVVVKGIQFRNHEVMGDIVPLAKRYADEGADELVFYDITASSDARVVDKSWVSRVAEVIDIPFCVAGGIKSVEDAKRILEFGADKVSINSPALENPALITELADRFGVQCIVVGIDSYFDAATGQYQVKQYTGDENRTRITKWTTPDWVVEVQKRGAGEIVLNMMNQDGVRQGYDLTQLKLIRDLCKVPLIASGGAGEMVHFRDAFQIADVDGALAASVFHKGIIPIPELKAYLRNEGVQIRD

Annotated regions:
Protein sequence:
MQSSVNEFLTPRHIDVQVVSPTRAKITLEPLERGFGHTLGNALRRILLSSMPGCAVVEAEIDGVLHEYSAIEGVQEDVIEILLNLKGIAIKLHGRDEVTLSLVKKGAGAVTAADIQLDHDVEIVNGDHLIANLAANGSLNMKLKVARGRGYEPADARQSDEDESRSIGRLQLDATFSPVRRVAYVVENARVEQRTNLDKLVIDLETNGTLDPEEAIRRAATILQQQLAAFVDLKGDSEPVVVEQEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLDNWPPASLKKDDKATA

Annotated regions:
phrase: EIDGVLHEYSAIEGVQEDVIEILLNLKGIAIKLHGRDEVTLSLVKKGAGAVTAADIQLDHDVEIVNGDHLIANLAANGSLNMKLKVARGRGYEPADARQSDEDESRSIGRLQLDATF
type: DOMAIN
name: DNA-dir_RNA_pol_insert
description: DNA-directed RNA polymerase, insert domain

phrase: RAKITLEPLERGFGHTLGNALRRILLSSMPGCAVVEAEIDGVLHEYSAIEGVQEDVIEILLNLKGIAIKLHGRDEVTLSLVKKGAGAVTAADIQLDHDVEIVNGDHLIANLAANGSLNMKLKVARGRGYEPADARQSDEDESRSIGRLQLDATFSPVRRVAYVVENARVEQRTNLDKLVIDLETNGTLDPEEAIRRAATILQQQLAAFVD
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: EPLERGFGHTLGNALRRILLSSMPGCAVVEAEIDGVLHEYSAIEGVQEDVIEILLNLKGIAIKLHGRDEVTLSLVKKGAGAVTAADIQLDHDVEIVNGDHLIANLAANGSLNMKLKVARGRGYEPADARQSDEDESRSIGRLQLDATFSPVRRVAYVVENARVEQRTNLDKLVIDLETNGTLDPEEAIRRAATILQQQ
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: QEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLTEIKDVL
type: DOMAIN
name: RNAP_asu_C
description: RNA polymerase, alpha subunit, C-terminal
Protein sequence:
MANVVVVGTQWGDEGKGKIVDWLSERADIVVRYQGGHNAGHTLVVNGVNYKLSLLPSGLVRGKLSIIGNGVVVDPHHFVAELKKLRDQGVKITPEILRIAENAPLILSLHRDLDATRESGLSGLKIGTTKRGIGPAYEDKVGRRAIRVMDLAETNTLMAKIERLLAHHNALRRGMGVAEINSQALYDELMQVADEILPFMDCTWRLLDESYQVGKHVLFEGAQGALLDNDFGTYPYVTSSNTVAGQACTGSGIGPGVIHYVLGIAKAYTTRVGEGPFPTEQINDIGEFLGMRGKEFGVVTGRKRRCGWFDAVLVRQMVTICGVQGIALTKLDVLDGLDEIKICIGYELDGKRINYLPSSMGAQARVMPVYETLEGWKEATAHALSWEDLPPQAVKYIRYIEKLINARVALLSTSPEREDTILVTDPFAD

Annotated regions:
phrase: QWGDEGK
type: BINDING_SITE
name: Adenylosuccin_syn_GTP-bd
description: Adenylosuccinate synthase, GTP-binding site

phrase: GIGPAYEDKVG
type: ACTIVE_SITE
name: Adenylosuccin_syn_Lys_AS
description: Adenylosuccinate synthase, active site
Protein sequence:
MKLLVLCIFAMMATLAMSRRWNFVTPREVNKAFEVALKVQIIAGFDRTLVKWLRAHGRSLSHVQKKALYFVNRRYMQTHWANYMLWVNKKIDALGRTAVVADYTRLGAEIGRRIDMDYFYNFLKGRNMIPKYLPYMEEINRMRSADIPIRYRGK

Annotated regions:
Protein sequence:
MAKRRGQPLDGVLLLDKPVGLSSNHALQRAKRTLDAAKAGHTGTLDPFATGLLLCCMGRATKISGAMLNADKTYRATLQFGEETDSGDLTGNIVARAPEDFPGVEEANLREVLSRFQGSIEQIPPMYSALKRDGKPLYEYARAGIELERPPRRVMIYRIELLSFTGHQAEIDVACSKGTYIRTLAQDIGRALGCYAHLFALRRTQVGPFSLDRAVTLDALQAMTDPKAALLALNELPAGLLPAT

Annotated regions:
phrase: RTLAQDIGRALGCYAHLFALRRTQVGPFSLDRAVTLDALQA
type: DOMAIN
name: TruB_C
description: tRNA pseudouridylate synthase B, C-terminal

phrase: KRTLDAAKAGHTGTLDPFATGLLLCCMGRATKISGAMLNADKTYRATLQFGEETDSGDLTGNIVARAPEDFPGVEEANLREVLSRFQGSIEQIPPMYSALKRDGKPLYEYARAGIELERPPRRVMIYRIELLSFTGHQAEIDVACSKGTY
type: DOMAIN
name: PsdUridine_synth_N
description: Pseudouridine synthase II, N-terminal
Protein sequence:
MTKTGKIDIKSLLLNELQGDVRDLAEPSYRAGQITDWLYKKRVDSIGKMTDLPQSLRERFAEKFSFSKIDVVRVLGSRDTTRKFLFRLSDANLIESVLIPASAALYGEKSDRRTICISTQVGCAYGCKFCASGLEGFSRNLRANEIIDQIIAIERVSGEKIDNIVFMGMGEPLANFENVMRAIRIVNAPWGLGIGARHITLSTSGLAPQIKKLADEPLQIRLAVSLHGATDEVRNQIMPINRKYNIETLLSACDYYAERKKQRLTFEYILIAGVNDSDEQAHLLAQHARRLFAKVNLIPYNAVEDLEWSRPSRSRQEKFLSILRAHKIPATLRREKGHDIDAACGQLRLQTSRNERRQVTTS

Annotated regions:
phrase: LLLNELQGDVRDLAEPSYRAGQITDWLYKKRVDSIGKMTDLPQSLRERFAEK
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: RTICISTQVGCAYGCKFCASGLEGFSRNLRANEIIDQIIAIERVSGEKIDNIVFMGMGEPLANFENVMRAIRIVNAPWGLGIGARHITLSTSGLAPQIKKLADEPLQIRLAVSLHGATDEVRNQIMPINRKYNIETLLSACDYYAERKKQRLTFEYILIAGVNDSDEQAHLLAQHARRLFAKVNLIPYNAVEDLEWSRPSRSRQEKFLSILR
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: KTGKIDIKSLLLNELQGDVRDLAEPSYRAGQITDWLYKKRVDSIGKMTDLPQSLRERFAEKFSFSKIDVVRVLGSRDTTRKFLFRLSDANLIESVLIPASAALYGEKSDRRTICISTQVGCAYGCKFCASGLEGFSRNLRANEIIDQIIAIERVSGEKIDNIVFMGMGEPLANFENVMRAIRIVNAPWGLGIGARHITLSTSGLAPQIKKLADEPLQIRLAVSLHGATDEVRNQIMPINRKYNIETLLSACDYYAERKKQRLTFEYILIAGVNDSDEQAHLLAQHARRLFAKVNLIPYNAVEDLEWSRPSRSRQEKFLSILRAHKIPATLRREKGHDIDAACGQLRLQTSRNERR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: ISTQVGCAYGCKFCASGLEGFSRNLRANEIIDQIIAIERVSGEKIDNIVFMGMGEPLANFENVMRAIRIVNAPWGLGIGARHITLSTSGLAPQIKKLADEPLQIRLAVSLHGATDEVRNQIMPINRKYNIETLLSACDYYAERKKQRLTFEYILIAGVNDSDE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: KSDRRTICISTQVGCAYGCKFCASGLEGFSRNLRANEIIDQIIAIERVSGEKIDNIVFMGMGEPLANFENVMRAIRIVNAPWGLGIGARHITLSTSGLAPQIKKLADEPLQIRLAVSLHGATDEVRNQIMPINRKYNIETLLSACDYYAERKKQRLTFEYILIAGVNDSDEQAHLLAQHARRLFAKVNLIPYNAVEDLEWSRPSRSRQEKFLSILRAHKIPATLRREKGH
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MRRSWITFHWNRCPRSGRRSDVAARRHASAETFDPALLDRLGVAFQRLETDSRQIRPGDVFVAMPGGRVDARALIPQAIAAGAVAVIWERDGFAWDPSWLLPNVSVQNLRTHLGTLASRAYGQPSRHLWVAGVTGTNGKTSCSHWIAQSLGRLGRRTGVIGTLGNGFPGRLATATHTTPDAVAVHAQLAQLLAEGAMGVAMEVSSHGLDQGRVNGVSFAAALFTNLSRDHLDYHGDMGRYGAAKARLFHWPELRHAVINLDDRFGAELAASLDRSRVDVLGYGFGRGEISGHHLDLSKRGLSLEIETPWGPAAIRSQLLGGFNAANLMGVLGILLAAGIELHAAAGVLEKVEPVVGRLQLVRRAGRPVVVVDYAHTPDALEKVLETLRGVLGPRGRLLCVFGCGGDRDPGKRPLMGEVATRLADHTIVTSDNPRSEQPLAIIDQVLVQAHPTYEVEADRAAAILKAIRGARPDDIVLIAGKGHETYQEIAGRRLPFSDADVASAALDEADRP

Annotated regions:
phrase: VTGTNGKTSCSHWIAQSLGRLGRRTGVIGTLGNGFPGRLATATHTTPDAVAVHAQLAQLLAEGAMGVAMEVSSHGLDQGRVNGVSFAAALFTNLSRDHLDYHGDMGRYGAAKARLFHWPELRHAVINLDDRFGAELAASLDRSRVDVLGYGFGRGEISGHHLDLSKRGLSLEIETPWGPAAIRSQLLGGFNAANLMGVLG
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRLQLVRRAGRPVVVVDYAHTPDALEKVLETLRGVLGPRGRLLCVFGCGGDRDPGKRPLMGEVATRLADHTIVTSDNPRSEQPLAIIDQVLVQAHPTYEVEADRAAAILKAIRGARPDDIVLIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: LETDSRQIRPGDVFVAMPGGRVDARALIPQAIAAGAVAVIWERDGFAWDPSWLLPNVSVQNLRTHLGTLASRA
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain
Protein sequence:
MGLIASAIAIGLAALGAGIGNGLIVSKTIEGTARQPEARGTLTSMMFVGVALVEALPIIAVVIAFMVQGK

Annotated regions:
phrase: ARQPEARGTLTSMMFVGVALV
type: BINDING_SITE
name: ATP_synth_F0_csu_DDCD_BS
description: ATP synthase, F0 complex, subunit C, DCCD-binding site

phrase: IASAIAIGLAALGAGIGNGLIVSKTIEGTARQPEARGTLTSMMFVGVALVEALPIIAVVIAF
type: DOMAIN
name: ATPase_proteolipid_c-like_dom
description: V-ATPase proteolipid subunit C-like domain
Protein sequence:
MPQVTMRQMLEAGVHFGHQTRYWNPKMAPYIFGARGKIHIINLEKTVPLFNDAMNFISSVAQKRGTVLFLGTKRSARETIKEEAERCGMPFMNQRWLGGTLTNFRTVKQSVARLKELEAGETDGTFEKLVKHEVLGLRRERDKLEASLGGIKDMNRLPDAIFVIDIGHEDIAIKEAKKLGIPVIAVVDTNYNPELVDYAIPGNDDAIRAVQLYSRAAADAVLEGKAAAPHAATVREEEFADAPAEDAKPARRAPAKKAAADKGEAQA

Annotated regions:
phrase: MRQMLEAGVHF
type: CONSERVED_SITE
name: Ribosomal_uS2_CS
description: Small ribosomal subunit protein uS2, conserved site

phrase: PDAIFVIDIGHEDIAIKEAKKLGI
type: CONSERVED_SITE
name: Ribosomal_uS2_CS
description: Small ribosomal subunit protein uS2, conserved site
Protein sequence:
MKFVNIYEIQRFDGQPTRHGIAPKKIFRSKYIPTGLVPRLKYWRDVPSRAEMSKRIGKYFEDEFKFYPNEEKLNEAVNIVQEKWISHYGTSLNVTSVSESFRTLPKSTSAGLPFKSGCTKYEARNKMMRFARSQWDRVSKELQLQVLPCRLGARCQLRKRGENKPRLIWAYPGYLSIIENQYLTAIKKVPPPNFIGWSTNWLDGGKSLNRLLFGDKWTWQSIAQIDFSSFDATVRTELIFHAFKILRSLFDLTRTENIMLDQLRHYFINTPILFYDKIIVKNRGIPSGSAFTQIIGTIVNMIACQYASLRSRDYNLRIPFSCWLGDDSFLNFETALCRQEFEYDYLEKFKELGLNVSIDKTHYTTRFIDDFEVRFKGVRPYVKFLGKQIDILLDLTFHNDLDKLDAQMALPEKEDLSAYETGVRLIGLVWAYGAHYDIYLRILKVYLSLKLKPEFHVQQLLSYSEKPERTKRYQENFFSSMKYQLNLDLDIYDLLAFPKFWDVSNRYFGSKYERLDFRSHKIYG

Annotated regions:
phrase: QSIAQIDFSSFDATVRTELIFHAFKILRSLFDLTRTENIMLDQLRHYFINTPILFYDKIIVKNRGIPSGSAFTQIIGTIVNMIACQYASLRSRDYNLRIPFSCWLGDDSFLNFETALCRQ
type: DOMAIN
name: RNA-dir_pol_PSvirus
description: RNA-directed RNA polymerase, catalytic domain

phrase: EKWISHYGTSLNVTSVSESFRTLPKSTSAGLPFKSGCTKYEARNKMMRFARSQWDRVSKELQLQVLPCRLGARCQLRKRGENKPRLIWAYPGYLSIIENQYLTAIKKVPPPNFIGWSTNWLDGGKSLNRLLFGDKWTWQSIAQIDFSSFDATVRTELIFHAFKILRSLFDLTRTENIMLDQLRHYFINTPILFYDKIIVKNRGIPSGSAFTQIIGTIVNMIACQYASLRSRDYNLRIPFSCWLGDDSFLNFETALCRQEFEYDYLEKFKELGLNVSIDKTHYTTRF
type: DOMAIN
name: RNA-dir_pol_C
description: RNA-directed RNA polymerase, C-terminal domain
Protein sequence:
MFPFVPLSLYVAKKLFRARGFRFCQKPGVLALAPEVDPCSIQHEVTGAETPHEELQYLRQLREILCRGSDRLDRTGIGTLSLFGMQARYSLRDHFPLLTTKRVFWRGVVQELLWFLKGSTDSRELSRTGVKIWDKNGSREFLAGRGLAHRREGDLGPVYGFQWRHFGAAYVDADADYTGQGFDQLSYIVDLIKNNPHDRRIIMCAWNPADLSLMALPPCHLLCQFYVADGELSCQLYQRSGDMGLGVPFNIASYSLLTYMLAHVTGLRPGEFIHTLGDAHIYKTHIEPLRLQLTRTPRPFPRLEILRSVSSMEEFTPDDFRLVDYCPHPTIRMEMAV

Annotated regions:
phrase: QYLRQLREILCRGSDRLDRTGIGTLSLFGMQARYSLRDHFPLLTTKRVFWRGVVQELLWFLKGSTDSRELSRTGVKIWDKNGSREFLAGRGLAHRREGDLGPVYGFQWRHFGAAYVDADADYTGQGFDQLSYIVDLIKNNPHDRRIIMCAWNPADLSLMALPPCHLLCQFYVADGELSCQLYQRSGDMGLGVPFNIASYSLLTYMLAHVTGLRPGEFIHTLGDAHIYKTHIEPLRLQLTRTPRPFPRLEILRSVSSMEEFTPDDFRLVDYCPHPTIRMEMA
type: DOMAIN
name: Thymidate_synth/dCMP_Mease_dom
description: Thymidylate synthase/dCMP hydroxymethylase domain

phrase: RRIIMCAWNPADLSLMALPPCHLLCQFY
type: ACTIVE_SITE
name: Thymidylate_synthase_AS
description: Thymidylate synthase, active site

phrase: QYLRQLREILCRGSDRLDRTGIGTLSLFGMQARYSLRDHFPLLTTKRVFWRGVVQELLWFLKGSTDSRELSRTGVKIWDKNGSREFLAGRGLAHRREGDLGPVYGFQWRHFGAAYVDADADYTGQGFDQLSYIVDLIKNNPHDRRIIMCAWNPADLSLMALPPCHLLCQFYVADGELSCQLYQRSGDMGLGVPFNIASYSLLTYMLAHVTGLRPGEFIHTLGDAHIYKTHIEPL
type: DOMAIN
name: Thymidate_synth/dCMP_Mease_dom
description: Thymidylate synthase/dCMP hydroxymethylase domain
Protein sequence:
MEAKTQFELITIKSEDGFDENELSVLLKSDSDFHMNGFIWGHLAAKHVYSKLNSKLKSFEPKSRSEINEMIKAITAVTEFIEVHYYHEEEIAWKFLIEQQQCLSEPLLTIVKPQHTQWTEINNEMKDLVKSLTENQEIKDKSSNGWTESISKVKEILQKLTAMVYKSFYDEERIIIPVVLSSIPKSKQNKLGEKMNETMKNAPTSKFVLGAILDVCKTNKDLDENVKKAIPWAVRKVIFPLALEKNYNWFSEFVEIK

Annotated regions:
Protein sequence:
MSQYFTLFRIEPAFDIGTENLEQTYRALAARFHPDKFASASAFEQKQAVMMSSTINDAYRTLKNPIDRAAYLLKTSGIDADAPEHTSFAPDFLMQQMEWRETLMEARAGNNLESLKNLDNEIRAEQEKLFCGLKQSFARQDCDTAAQQVRQGRFLDKLRHEISSAL

Annotated regions:
phrase: QYFTLFRIEPAFDIGTENLEQTYRALAARFHPDKFASASAFEQKQAVMMSSTINDAYRTLKNPIDRAAYLLK
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: PDFLMQQMEWRETLMEARAGNNLESLKNLDNEIRAEQEKLFCGLKQSFARQDCDTAAQQVRQGRFLDKLRHE
type: DOMAIN
name: HscB_oligo_C
description: Co-chaperone HscB, C-terminal oligomerisation domain

phrase: YFTLFRIEPAFDIGTENLEQTYRALAARFHPDKFASASAFEQKQAVMMSSTINDAYRTLK
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: SQYFTLFRIEPAFDIGTENLEQTYRALAARFHPDKFASASAFEQKQAVMMSSTINDAYRTLKNPI
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: GTENLEQTYRALAARFHPDKFASASAFEQKQAVMMSSTINDAYRTLKNPIDRAA
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain
Protein sequence:
MAQFFKAKPNSSKQLSAKQSFSVHQLDHLGAGIAQHQGKVVFIPGALPNETVQAQLTEQKKNYARAKLIKVETPSAERVTPLCPHYQSCGGCDLQHMSLAGQREHKSAALVDIMAKFAGAEGNSVPALTGEGWHYRRRARLATLFDKNTKQLSLGFRASSSNQVVPIDSCLVLAKPLADLIAPFAKLLNQLAAKSSLGHVELIDADNGHFAVIRITKPLNDKDMAKLAQFAEQHQIHICLQDNNGEFHGVNGTLLLPVYQLLDDNADATPVSLTFTPGNFVQVNAQINKTMVAQALEWLAPQPGERILDLFCGMGNFSLPLAKLGAEVIGVEGVPEMVSQARENAAANGLSNLTFYHGDLSADLSCEPWMGKIDKLLLDPARAGAFESLQWLKKMKPRQVVYVSCNPASLARDSAVLLERGYKLQKLGLIDMFPQTHHIEAMALFELAK

Annotated regions:
phrase: VHQLDHLGAGIAQHQGKVVFIPGALPNETVQAQLTEQKKNYARAKL
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: IDMFPQTHHI
type: CONSERVED_SITE
name: MeTrfase_TrmA_CS
description: RNA methyltransferase TrmA, conserved site

phrase: SKQLSAKQSFSVHQLDHLGAGIAQHQGKVVFIPGALPNETVQAQLTEQKKNYARAKLI
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: DPARAGAFESLQWLKKMKPRQVVYVSCNPA
type: ACTIVE_SITE
name: MeTrfase_TrmA_AS
description: RNA methyltransferase TrmA, active site
Protein sequence:
MEKKDMLYEGKAKKIFGTDDKDTVVVYYKDDATAFNGEKKGTIEDKGVMNNSITSMLFELLEKKGVKTHFIEKINEREQLCKKVEIVPLEVIVRNIAAGSMAKRLGLSEGRKLDTTVFEISYKNDDLNDPLINDYHAVAIGLTTFEELKEMYSIAEKVNNTLKEFFDKQGIILVDFKIEIGRSRGGLLLADEISPDTCRLWDKKTGEKLDKDRFRRDMGNVKEAYMEILKRVNK

Annotated regions:
phrase: IVPLEVIVRNIAAG
type: CONSERVED_SITE
name: SAICAR_synthetase_CS
description: SAICAR synthetase, conserved site

phrase: LVDFKIEI
type: CONSERVED_SITE
name: SAICAR_synthetase_CS
description: SAICAR synthetase, conserved site

phrase: LYEGKAKKIFGTDDKDTVVVYYKDDATAFNGEKKGTIEDKGVMNNSITSMLFELLEKKGVKTHFIEKINEREQLCKKVEIVPLEVIVRNIAAGSMAKRLGLSEGRKLDTTVFEISYKNDDLNDPLINDYHAVAIGLTTFEELKEMYSIAEKVNNTLKEFFDKQGIILVDFKIEIGRSRGGLLLADEISPDTCRLWDKKTGEKLDKDRFRRDMGNVKEAYMEILK
type: DOMAIN
name: SAICAR_synt/ADE2_N
description: SAICAR synthetase/ADE2, N-terminal

phrase: KDMLYEGKAKKIFGTDDKDTVVVYYKDDATAFNGEKKGTIEDKGVMNNSITSMLFELLEKKGVKTHFIEKINEREQLCKKVEIVPLEVIVRNIAAGSMAKRLGLSEGRKLDTTVFEISYKNDDLNDPLINDYHAVAIGLTTFEELKEMYSIAEKVNNTLKEFFDKQGIILVDFKIEIGRSRGGLLLADEISPDTCRLWDKKTGEKLDKDRFRRDMGNVKEAYMEILKRVN
type: DOMAIN
name: SAICAR_synt/ADE2_N
description: SAICAR synthetase/ADE2, N-terminal
Protein sequence:
MVATCLQVVGFVTSFVGWIGVIVTTSTNDWVVTCGYTIPTCRKLDELGSKGLWADCVMATGLYHCKPLVDILILPGYVQACRALMIAASVLGLPAILLLLTVLPCIRMGHEPGVAKYRRAQLAGVLLILLALCAIVATIWFPVCAHRETTIVSFGYSLYAGWIGAVLCLVGGCVILCCAGDAQAFGENRFYYSSGSSSPTHAKSAHV

Annotated regions:
phrase: GLWADCVMATGLYH
type: CONSERVED_SITE
name: Claudin_CS
description: Claudin, conserved site
Protein sequence:
MKVISSIQELRDQLRGQNRVAFVPTMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGPNEDFDKYPRTLQDDIEKLQKEGVYVLFAPTERDMYPEPQEYRVEPPHDLGDTLEGEFRPGFFKGVCTVVMKLFCCVQPRVAVFGKKDYQQLMIVRRMAHQFALPVDIVPAETVRADDGLALSSRNVYLTNEERAEAPELYRTLHQVRQDVLETVLQGQASHEEVTTKAMDYLRGRGWQPDYVAVRRRSDLQKPTPENIAAGEPLVVLTAAKLGKTRLIDNLEI

Annotated regions:
phrase: RVAFVPTMGNLHEGHLSLMRLARQHGDPVVASIFVNRLQFGPNEDFDKYPRTLQDDI
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain
Protein sequence:
MMEAQQQPSAGSLSWRLSSHPITLLTFLAFRVSSLLVYLFGLIFIDNMVMIFIITILLLAADFYYLKNIAGRRLVGLRWWNEVDPQSGDSHWVFESSEPGTKTVNPTDSRFFWLAIYAQPLLWIGLAVLALVRLKFIWLPLVAIALVLTITNSLAFSRCDKFSQASNLAGSAFSTGNLAGSIATGLVGRLFSRS

Annotated regions:
Protein sequence:
MSEEAYEETQESSQSPRPVPKLNERILSTLSRRSVAAHPWHDLEIGPEAPLVFNVVVEITKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPLDVLVLMQEPVLPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYKHFTDIKQLAPHRLQEIRRFFEDYKKNENKKVAVNDFLPSESAHEAIQYSMDLYAEYILHTLRR

Annotated regions:
Protein sequence:
MIFLSQAQIDALLLEDIQGGDLTTRALNIGHQHGYIEFFLRQGGCVSGISVACKMLTTLGLTIDDAVSDGSQANAGQRLIRAQGNAAALHQGWKAVQNVLEWSCGVSDYLAQMLALLRERYPDGNIACTRKAIPGTRLLASQAILAAGGLIHRAGCAETILLFANHRHFLHDNQDWSGAINQLRRHAPEKKIVVEADTPKEAIAALRAQPDVLQLDKFSPQQATEIAQIAPSLAPHCTLALTGGINLTTLKNYLDCGIRLFITSAPYYAAPADIKVSLQPAASI

Annotated regions:
phrase: DLTTRALNIGHQHGYIEFFLRQGGCVSGISVACKMLTTLGLTIDDAVSDGSQANAGQRLIRAQGNAAALHQGWKAVQNVLEWS
type: DOMAIN
name: Quinolinate_PRibosylTrfase_N
description: Quinolinate phosphoribosyl transferase, N-terminal

phrase: AQMLALLRERYPDGNIACTRKAIPGTRLLASQAILAAGGLIHRAGCAETILLFANHRHFLHDNQDWSGAINQLRRHAPEKKIVVEADTPKEAIAALRAQPDVLQLDKFSPQQATEIAQIAPSLAPHCTLALTGGINLTTLKNYLDCGIRLFITSAPYYAAPADIK
type: DOMAIN
name: Quinolinate_PRibosylTrfase_C
description: Quinolinate phosphoribosyl transferase, C-terminal