nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MDKILEAVVTSSYPVSVKQGLVRRVLEAARQPLEREQCLALLALGARLYVGGAEELPRRVGCQLLHVAGRHHPDVFAEFFSARRVLRLLQGGAGPPGPRALACVQLGLQLLPEGPAADEVFALLRREVLRTVCERPGPAACAQVARLLARHPRCVPDGPHRLLFCQQLVRCLGRFRCPAEGEEGAVEFLEQAQQVSGLLAQLWRAQPAAILPCLKELFAVISCAEEEPPSSALASVVQHLPLELMDGVVRNLSNDDSVTDSQMLTAISRMIDWVSWPLGKNIDKWIIALLKGLAAVKKFSILIEVSLTKIEKVFSKLLYPIVRGAALSVLKYMLLTFQHSHEAFHLLLPHIPPMVASLVKEDSNSGTSCLEQLAELVHCMVFRFPGFPDLYEPVMEAIKDLHVPNEDRIKQLLGQDAWTSQKSELAGFYPRLMAKSDTGKIGLINLGNTCYVNSILQALFMASDFRHCVLRLTENNSQPLMTKLQWLFGFLEHSQRPAISPENFLSASWTPWFSPGTQQDCSEYLKYLLDRLHEEEKTGTRICQKLKQSSSPSPPEEPPAPSSTSVEKMFGGKIVTRICCLCCLNVSSREEAFTDLSLAFPPPERCRRRRLGSVMRPTEDITARELPPPTSAQGPGRVGPRRQRKHCITEDTPPTSLYIEGLDSKEAGGQSSQEERIEREEEGKEERTEKEEVGEEEESTRGEGEREKEEEVEEEEEKVEKETEKEAEQEKEEDSLGAGTHPDAAIPSGERTCGSEGSRSVLDLVNYFLSPEKLTAENRYYCESCASLQDAEKVVELSQGPCYLILTLLRFSFDLRTMRRRKILDDVSIPLLLRLPLAGGRGQAYDLCSVVVHSGVSSESGHYYCYAREGAARPAASLGTADRPEPENQWYLFNDTRVSFSSFESVSNVTSFFPKDTAYVLFYRQRPREGPEAELGSSRVRTEPTLHKDLMEAISKDNILYLQEQEKEARSRAAYISALPTSPHWGRGFDEDKDEDEGSPGGCNPAGGNGGDFHRLVF

Annotated regions:
phrase: VGGAEELPRRVGCQLLHVAGRHHPDVFAEFFSARRVLRLLQGGAGPPGPRALACVQLGLQLLPEGPAADEVFALLRREVLRTVCERPGPAACAQVARLLARHPRCVPDGPHRLLFCQQLVRCLGRFRCPAEGEEGAVEFLEQAQQVSGLLAQLWRAQPAAILPCLKELFAVISCAEEEPPSSALASVVQHLPLELMDGVVRNLSNDDSVTDSQMLTAISRMIDWVSWPLGKNIDKWIIALLKGLAAVKKFSILIEVSLTKIEKVFSKLLYPIVRGAALSVLKYMLLTFQHSHEAFHLLLPHIPPMVASLVKEDSNSGTSCLEQLAELVHC
type: DOMAIN
name: Usp38-like_N
description: Ubiquitin carboxyl-terminal hydrolase 38-like, N-terminal domain

phrase: IGLINLGNTCYVNSILQALFMASDFRHCVLRLTENNSQPLMTKLQWLFGFLEHSQRPAISPENFLSASWTPWFSPGTQQDCSEYLKYLLDRLHEEEKTGTRICQKLKQSSSPSPPEEPPAPSSTSVEKMFGGKIVTRICCLCCLNVSSREEAFTDLSLAFPPPERCRRRRLGSVMRPTEDITARELPPPTSAQGPGRVGPRRQRKHCITEDTPPTSLYIEGLDSKEAGGQSSQEERIEREEEGKEERTEKEEVGEEEESTRGEGEREKEEEVEEEEEKVEKETEKEAEQEKEEDSLGAGTHPDAAIPSGERTCGSEGSRSVLDLVNYFLSPEKLTAENRYYCESCASLQDAEKVVELSQGPCYLILTLLRFSFDLRTMRRRKILDDVSIPLLLRLPLAGGRGQAYDLCSVVVHSGVSSESGHYYCYAREGAARPAASLGTADRPEPENQWYLFNDTRVSFSSFESVSNVTSFFPKDTAYVLF
type: DOMAIN
name: Peptidase_C19_UCH
description: Peptidase C19, ubiquitin carboxyl-terminal hydrolase

phrase: YDLCSVVVHSGVSSESGH
type: CONSERVED_SITE
name: USP_CS
description: Ubiquitin specific protease, conserved site

phrase: GLINLGNTCYVNSIL
type: CONSERVED_SITE
name: USP_CS
description: Ubiquitin specific protease, conserved site

phrase: IGLINLGNTCYVNSILQALFMASDFRHCVLRLTENNSQPLMTKLQWLFGFLEHSQRPAISPENFLSASWTPWFSPGTQQDCSEYLKYLLDRLHEEEKTGTRICQKLKQSSSPSPPEEPPAPSSTSVEKMFGGKIVTRICCLCCLNVSSREEAFTDLSLAFPPPERCRRRRLGSVMRPTEDITARELPPPTSAQGPGRVGPRRQRKHCITEDTPPTSLYIEGLDSKEAGGQSSQEERIEREEEGKEERTEKEEVGEEEESTRGEGEREKEEEVEEEEEKVEKETEKEAEQEKEEDSLGAGTHPDAAIPSGERTCGSEGSRSVLDLVNYFLSPEKLTAENRYYCESCASLQDAEKVVELSQGPCYLILTLLRFSFDLRTMRRRKILDDVSIPLLLRLPLAGGRGQAYDLCSVVVHSGVSSESGHYYCYAREGAARPAASLGTADRPEPENQWYLFNDTRVSFSSFESVSNVTSFFPKDTAYVLFYRQ
type: DOMAIN
name: USP_dom
description: Ubiquitin specific protease domain
Protein sequence:
MSWADLNLMPALPEIVLLIAVSAILIIDLFVKGERRGVTYLLSMLALVATGAATLAAWLPYPVLTFSGMYVADPIASVAKLGLVVATGVAMIYARQYAFDRGFLKGELFTLMLFALLGMCVMVSASHMLTLYIGLELLSLALYALIALSRESVPATEAAMKYFVLGALASGLLLYGVSMVYGGTQSLHIVAVAQSIASGNANVTLVSLGLVFIVAGLAFKLGAVPFHMWVPDVYQGAPTAVTLFVGSAPKLAAFVFVIRFLAQALEPAAVAWQPMLILLAIASLVVGNLAAIMQTNIKRMLAYSTISHMGFMLIGILAATPAGYSAAMFYAITYMLMALAGFGVLLALSRAGFDCETLDDLKGLNRKNAWYALLVLLVMFSMAGIPPLVGFYAKFAVLEAAVNVGLTWLAVVGVVMSLIGAFYYLRVVKAVYFDEATGSAGDALTVGGDMKLVLGVNGLVLLGLGILPNGLYTLCLEAVRQSLGTL

Annotated regions:
phrase: ASHMLTLYIGLELLSLALYALIALSRESVPATEAAMKYFVLGALASGLLLYGVSMVYGGTQSLHIVAVAQSIASGNANVTLVSLGLVFIVAGLAFKLGAVPFHMWVPDVYQGAPTAVTLFVGSAPKLAAFVFVIRFLAQALEPAAVAWQPMLILLAIASLVVGNLAAIMQTNIKRMLAYSTISHMGFMLIGILAATPAGYSAAMFYAITYMLMALAGFGVLLALSRAGFDCETLDDLKGLNRKNAWYALLVLLVMFSMAGIPPLVGFYAKFAVLEAAVNVGLTWLAVVGVVMSL
type: DOMAIN
name: ND/Mrp_TM
description: NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domain
Protein sequence:
MALNIENIIAEIKEATILELNDLVKAIEEEFGVTAAAPVAAAAAGGEAAAAKDSFDVELTAAGDKKVGVIKVVREITGEGLKEAKAIVDNAPSVIKEGASEAEANEIKEKLEAAGASVTLK

Annotated regions:
phrase: FDVELTAAGDKKVGVIKVVREITGEGLKEAKAIVDNAPSVIKEGASEAEANEIKEKLEAAGASVTL
type: DOMAIN
name: Ribosomal_bL12_C
description: Large ribosomal subunit protein bL12, C-terminal

phrase: IENIIAEIKEATILELNDLVKAIEEEFGVTAAAPVAAAAAGGEAAA
type: DOMAIN
name: Ribosomal_bL12_oligo
description: Large ribosomal subunit protein bL12, oligomerization
Protein sequence:
MAETAYVPRLRAEYDNSIRTQLTEKFGYGNVMQVPRLDKVVLNMGVGEAVNDRKKAEQAAADMALIAGQKAVVTYSRVAISTFKLRENQPIGCKVTLRKAKMYEFIDRLITVALPRVRDFRGLNPKSFDGRGNYSLGIKEHIIFPEIDFDKTGESWGMDITVCTTAGTDDEARALLTAFNFPFRQ

Annotated regions:
phrase: MALIAGQKAVVTYSRV
type: CONSERVED_SITE
name: Ribosomal_uL5_CS
description: Large ribosomal subunit protein uL5, conserved site

phrase: PIGCKVTLRKAKMYEFIDRLITVALPRVRDFRGLNPKSFDGRGNYSLGIKEHIIFPEIDFDKTGESWGMDITVCTTAGTDDEARALLTAFNFP
type: DOMAIN
name: Ribosomal_uL5_C
description: Large ribosomal subunit protein uL5, C-terminal

phrase: NVMQVPRLDKVVLNMGVGEAVNDRKKAEQAAADMALIAGQKAVVTYSRVAISTFKL
type: DOMAIN
name: Ribosomal_uL5_N
description: Large ribosomal subunit protein uL5, N-terminal
Protein sequence:
MQRITITIDDDLLETIDKISEQRGYASRSETLRDLVRDAVTREQAAVDSETKCYATLTYVYEHETRDLSRRLTTTQHHHHDLSVSTLHVHVDGHDCLEVSVLKGTVGEIKSFADSVVTQRGVRFGNLHLIPSEHGPHDHGPHSHD

Annotated regions:
phrase: RITITIDDDLLETIDKISEQRGYASRSETLRDLVRDAVT
type: DOMAIN
name: CopG
description: Ribbon-helix-helix protein, CopG

phrase: ATLTYVYEHETRDLSRRLTTTQHHHHDLSVSTLHVHVDGHDCLEVSVLKGTVGEIKSFADSVVTQRGVRFGNLHL
type: DOMAIN
name: TF_NikR_Ni-bd_C
description: Transcription factor, NikR, nickel binding C-terminal
Protein sequence:
MPAVLSSVLSNITDFVVHEGNGVKGLADMGLQSLPKQYIQPAEERITTSTVIVDDTIPVIDLSEWGSDPKVGDLICEAAEKWGFFQIVNHGVPLEVLEEVKAATYRFFRLPAEEKNKHSKDNSPSNNVRYGTSFTPHAEKALEWKDFLSLFYVSDEEAAALWPSACRDEALTFMRNCDAVIKRLLKSLMKGLNVTEIDGTKESLLMGSKRINMNYYPKCPNPELTVGVGRHSDVSTLTILLQDQIGGLYVRKLDSDTWVHVPPINGAIVINVGDALQILSNGRYKSIEHRVIANGSNNRISVPIFVNPRPNDIIGPLPELLESGEKAVYKNVLYSDYVKHFFRKAHDGKETVDFAKIN

Annotated regions:
phrase: TKESLLMGSKRINMNYYPKCPNPELTVGVGRHSDVSTLTILLQDQIGGLYVRKLDSDTWVHVPPINGAIVINVGDALQILSNGRYKSIEHRVIANGSNNRISVPIFVN
type: DOMAIN
name: Oxoglu/Fe-dep_dioxygenase_dom
description: Oxoglutarate/iron-dependent dioxygenase domain

phrase: NMNYYPKCPNPELTVGVGRHSDVSTLTILLQDQIGGLYVRKLDSDTWVHVPPINGAIVINVGDALQILSNGRYKSIEHRVIANGSNNRISVPIFVN
type: DOMAIN
name: IPNS-like_FE2OG_OXY
description: Isopenicillin N synthase-like, Fe(2+) 2OG dioxygenase domain

phrase: IPVIDLSEWGSDPKVGDLICEAAEKWGFFQIVNHGVPLEVLEEVKAATYRFFRLPAEEKNKHSKDNSPSNNVRYGTSFTPHAEKALEWKDFLSLFYVSDEEAAALW
type: DOMAIN
name: DIOX_N
description: Non-haem dioxygenase N-terminal domain
Protein sequence:
MQIDSDLQNNLDTLKKTLGQNDDMMFYTFAFGDSRQKACLLYIDGLTENKMLAQYVISPLQKEALAHKECSIEDLSAFFFGFHHSVVSTMKEIEQLVFSGQAILLADGYRGGLAFDTKSVATRSLDEPSSEVVERGPKIGFIEKLRTNTALLRERTSDPNLVIKEMTLGKRTKKKIAVAYIQDIAPDYVVKEVFKRLKSVNIDNLPESGTLEQLIEDEPFSIFPTILSTERPDRVESSLLEGRVSILVDGTPFALIVPATVDEFIHSPDDYSQRWIPMSLVRLLRYSSILITIYLPGLYISLVSFHTGLLPTRMAISIAGSRLNVPFPPFVEAFIMIFTIELIREAGLRLPKPIGQTIGLIGGVVIGQAAVQAQIVSALMVIVVSVTALASFTVPSYAYNFPLRIIRIGVMISATALGMYGVIMVYLFVIGHLMRLKSFGQDYIIPIMAQPGQDLKDTVIRIPTMFLKRRPTRNDPEDNIRQR

Annotated regions:
Protein sequence:
MLKGKKIILGITGSIAAYKAAFLVRLLVQNRAEVKVIMTATAEEFISPLTLSTLSANPVLSGLFERKTGEWTNHVSLGLWADLMIVAPATANTIAKMAYGQADNLLLTVFLSARCPVIIAPAMDMDMFLHPATQRNVKTLKDMGVSIIEAATGELASGLSGKGRLEEPAVILEKLIDFFTTQEGDLPLHGKKIMLTAGPTFEAIDPVRFIGNHSSGKMGIALADALSEKGAEVHLVAGPMNLVPSDEKVHIYNVVSADEMFEKSLDLFSQMDGAIMAAAVSDFTPVSPAEQKTKRGEDDWIIRLKPTRDIAAELGRMKGPEQWLVGFALETQNETVNAKKKLKKKNLDMIVLNSLNDQGAGFGHDTNKITIIDRTGELIVFDLKSKVQVANDIVSHIIKLIQTDF

Annotated regions:
phrase: LHGKKIMLTAGPTFEAIDPVRFIGNHSSGKMGIALADALSEKGAEVHLVAGPMNLVPSDEKVHIYNVVSADEMFEKSLDLFSQMDGAIMAAAVSDFTPVSPAEQKTKRGEDDWIIRLKPTRDIAAELGRMKGPEQWLVGFALETQNETVNAKKKLKKKNLDMIVLNSLNDQGAGFGHDTNKITI
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal

phrase: KKIILGITGSIAAYKAAFLVRLLVQNRAEVKVIMTATAEEFISPLTLSTLSANPVLSGLFERKTGEWTNHVSLGLWADLMIVAPATANTIAKMAYGQADNLLLTVFLSARCPVIIAPAMDMDMFLHPATQRNVKTLKDMGVSIIEAATGELASGLSGKGRLEEPAVILEKLID
type: DOMAIN
name: Flavoprotein
description: Flavoprotein
Protein sequence:
MAFEDRCSPSQANSPGPVTGRVPAPHAETLAYSPQSQYTCTTIESKYERGSPNMTIVKVQPDSPPPSPGRGQNEMEYQDYYRPETPDVKPHFSREEQRFELDRSRGQRLQPTTPVAFSINNILHPEFGLNAIRKTSKIEGPKPIGPNHSILYKPYDLSKPDLSKYGFDYLKSKETSDCNALPPLGGLRETVSQIGERLSRDREPPKSLEQQKRPDSASSIVSSTSSGAVSTCGSSDASSIQSQSNPGQLWPAWVYCTRYSDRPSSGPRSRRVKKKAAPEEKRPRTAFSGAQLARLKHEFAENRYLTERRRQSLAAELGLAEAQIKIWFQNKRAKIKKASGQRNPLALQLMAQGLYNHSTVTESDDEEEINVT

Annotated regions:
phrase: NRYLTERRRQS
type: DOMAIN
name: HD_metazoa
description: Homeodomain, metazoa

phrase: LGLAEAQIKI
type: DOMAIN
name: HD_metazoa
description: Homeodomain, metazoa

phrase: WFQNKRAKI
type: DOMAIN
name: HD_metazoa
description: Homeodomain, metazoa

phrase: LAAELGLAEAQIKIWFQNKRAKI
type: CONSERVED_SITE
name: Homeobox_CS
description: Homeobox, conserved site

phrase: LMAQGLY
type: CONSERVED_SITE
name: Homeobox-engrailed_CS
description: Homeobox engrailed-type, conserved site

phrase: PEEKRPRTAFSGAQLARLKHEFAENRYLTERRRQSLAAELGLAEAQIKIWFQNKRAKIKK
type: DOMAIN
name: HD
description: Homeodomain

phrase: KRPRTAFSGAQLARLKHEFAENRYLTERRRQSLAAELGLAEAQIKIWFQNKRAKIK
type: DOMAIN
name: HD
description: Homeodomain

phrase: EEKRPRTAFSGAQLARL
type: DOMAIN
name: HD_engrailed
description: Homeodomain engrailed

phrase: RNPLALQLMAQGLYNHS
type: DOMAIN
name: HD_engrailed
description: Homeodomain engrailed

phrase: EKRPRTAFSGAQLARLKHEFAENRYLTERRRQSLAAELGLAEAQIKIWFQNKRAKIKKASGQ
type: DOMAIN
name: HD
description: Homeodomain

phrase: RRQSLAAEL
type: CONSERVED_SITE
name: HTH_motif
description: Helix-turn-helix motif

phrase: GLAEAQIKIWFQNKRA
type: CONSERVED_SITE
name: HTH_motif
description: Helix-turn-helix motif

phrase: KRPRTAFSGAQLARLKHEFAENRYLTERRRQSLAAELGLAEAQIKIWFQNKRAKIK
type: DOMAIN
name: HD
description: Homeodomain

phrase: ASGQRNPLALQLMAQGLYNHSTVTESDDEE
type: DOMAIN
name: Homeobox-engrailed_C-terminal
description: Homeobox engrailed, C-terminal
Protein sequence:
MQTGSTPHDDRAGVSANGILGAQARGASGRLLPEIWMQDGAKRVEEALARLLCAEDDGETELMAAMRYATLHGGKRTRALLCLAAGALADTPAHMLDDVGAAIEMMHACTLVHDDLPAMDDDVLRRGLPTVHVKFGEATAILVGDALQAHAFLTLASLNAPGDSPIALVRELAQAVSAEGAAGGQAIDLSLVGKHVELDRIVAMHRMKSGALVRASVRMGALCAVGVNAAHAALYCALDHYSACFGLALQVIDDILDVTADTAALGKTPGKDAAAQKPTCASIMGLQEARQFALDLLRDAGEAIAPLGPRAERLAQLIQRANAYLFKHAPRA

Annotated regions:
phrase: LVHDDLPAMDDDVLRR
type: CONSERVED_SITE
name: Polyprenyl_synt_CS
description: Polyprenyl synthetase, conserved site

phrase: FGLALQVIDDIL
type: CONSERVED_SITE
name: Polyprenyl_synt_CS
description: Polyprenyl synthetase, conserved site
Protein sequence:
MAPNNGSWLVLSISMMLLSHGMIIIAKDQAIHHHDDDHDDMLINDHQMINDDDPYRTAYHFQSPKNWMNDPNGPMIYKGIYHLFYQYYPYDPVWHTEIVWGHSTSTDLINWTQQPIALSPSEPYDINGCWSGSITILPQNKPVILYTGINNKNYQVQNLALPKNLSDPYLKEWIKLPQNPLMAGTPTNNNNINASSFRDPSTAWQLSDGKWRVIVGTQQGKRGLAVLFTSDDFVKWNNTGNPLHSTEGNGIWECPDFFPVYVGKSLGADTSIIGDDVKHVLKLSLFDTQYEYYTIGRYDIEKDIYVPDEGSIESDLGLRYDYGKFYASKSFFDDETNRRILWGWVNESSIQADDIKKGWSGVQAIPRTVVLDKSGKQLVQWPLAEVDMLRENDVELPSQVIKGGSLVEISQITASQADVEISFKIPESNYVEELDSTCTNPQILCSQKGASIKGRFGPFGLLTLASMGLEEYTAVFFRIFKGPNKYVVLMCSDQTRSSLNPTTDKLSFGIFVDVDPINEDLSLRILIDHSIVESFSAKGKSCITARVYPTMAINDKAKLYVFNNGTEDVKITKLSAWSMKKAQINLSTDNTSNMSYNSNKVEKEEF

Annotated regions:
phrase: LRENDVELPSQVIKGGSLVEISQITASQADVEISFKIPESNYVEELDSTCTNPQILCSQKGASIKGRFGPFGLLTLASMGLEEYTAVFFRIFKGPNKYVVLMCSDQTRSSLNPTTDKLSFGIFVDVDPINEDLSLRILIDHSIVESFSAKGKSCITARVYPTMAINDKAKLYVFNNGTEDVKITKLSAW
type: DOMAIN
name: Glyco_hydro_32_C
description: Glycosyl hydrolase family 32, C-terminal

phrase: HFQSPKNWMNDPNGPMIYKGIYHLFYQYYPYDPVWHTEIVWGHSTSTDLINWTQQPIALSPSEPYDINGCWSGSITILPQNKPVILYTGINNKNYQVQNLALPKNLSDPYLKEWIKLPQNPLMAGTPTNNNNINASSFRDPSTAWQLSDGKWRVIVGTQQGKRGLAVLFTSDDFVKWNNTGNPLHSTEGNGIWECPDFFPVYVGKSLGADTSIIGDDVKHVLKLSLFDTQYEYYTIGRYDIEKDIYVPDEGSIESDLGLRYDYGKFYASKSFFDDETNRRILWGWVNESSIQADDIKKGWSGVQAIPRTVVLDKSGKQLVQW
type: DOMAIN
name: Glyco_hydro_32_N
description: Glycosyl hydrolase family 32, N-terminal
Protein sequence:
MNISELLHNIPILQQQGSFTGGVGEIQMDSRKVSKGDVFVAISGPQEDGHDFITSALDKGAQVIFHEKEIKDFRENVLYIQVKNSAKSLGLICKNYFGDPSSQLNLIGITGTNGKTTTASLLYQTAESLGYPSVLISTINIRIHQKTLSTKNTTPDIISINKILKEAVDSGFEYAFMEVSSHGIEQERISGLEFKVAGFTNISHEHLDYHKTFKSYIIAKKKFFDELSKDAIAITNMDDKNGVVMLQNSKALKKSYALKSVADYQGKILENRFNGMLLLLNQKELWTQLVGKFNAYNLLLAYSIGLELGWDEEELLVSLSKLQKVKGRFESYISPSGQIIIVDYAHTPDALENVMSTVNETRTKNETFWVLVGCGGNRDAQKRPKMAKVACRLADRVVLTSDNPRNEDPNKIIEDMESGIEPQFFSKYSKIPDRQEAIKNVLANSHSGDIILIAGKGHENYQEIKGERFYFDDMEITKSLTQKIFK

Annotated regions:
phrase: ITGTNGKTTTASLLYQTAESLGYPSVLISTINIRIHQKTLSTKNTTPDIISINKILKEAVDSGFEYAFMEVSSHGIEQERISGLEFKVAGFTNISHEHLDYHKTFKSYIIAKKKFFDELSKDAIAITNMDDKNGVVMLQNSKALKKSYALKSVADYQGKILENRFNGMLLLLNQKELWTQLVGKFNAYNLLLA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRFESYISPSGQIIIVDYAHTPDALENVMSTVNETRTKNETFWVLVGCGGNRDAQKRPKMAKVACRLADRVVLTSDNPRNEDPNKIIEDMESGIEPQFFSKYSKIPDRQEAIKNVLANSHSGDIILIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: IQMDSRKVSKGDVFVAISGPQEDGHDFITSALDKGAQVIFHEKEIKDFRENVLYIQVKNSAKSLGLIC
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain
Protein sequence:
MSNLAKQKVSMVSLGCPKNLVDAEVMLGVLAQQGYEITMDEKEADVIIVNTCSFIKEAREESVDAILDLADRKSDGNCKTLVVAGCLPQRYQEELAKELPEVDILIGTGDYPRVAEILAEHHAGDAQIKYVGDPNYIYDEDLPRLNSSPGWYAYLKIGEGCSNCCTYCVIPSLRGPYRSRPVEALVAEAERLVKGGVRELILVSQDITRYGSDMDDTSSLAGLIRRLAAIEDLKWIRLLYAYPDGISDELIELFKTEPKLCNYLDIPIQHISDNVLQRMKRRSSEEQIRTLIARLRNEIPGITLRTSLIVGFPGETVDDFLNLTQFVEKAQFDRLGVFCYSREEGTPAAEMPDQVSERVKRERHRKLMKTQARVSFRRNRAMVGQTEQVIVEGYSEETELLLKGRTSRQAPDIDGQVYITSGHAEIGDIVACKITDSSDYDLVAEMIEE

Annotated regions:
phrase: AKQKVSMVSLGCPKNLVDAEVMLGVLAQQGYEITMDEKEADVIIVNTCSFIKEAREESVDAILDLADRKSDGNCKTLVVAGCLPQRYQEELAKELPEVDILIGTGDYPRVAEILAEHHAGDAQIKYVGDPNYIYDEDLPRLNSSPGWYAYLKIGEGCSNCCTYCVIPSLRGPYRSRPVEALVAEAERLVKGGVRELILVSQDITRYGSDMDDTSSLAGLIRRLAAIEDLKWIRLLYAYPDGISDELIELFKTEPKLCNYLDIPIQHISDNVLQRMKRRSSEEQIRTLIARLRNEIPGITLRTSLIVGFPGETVDDFLNLTQFVEKAQFDRLGVFCYSREEGTPAAEMPDQVSERVKRERHRKLMKTQARVSFRRNRAMVGQTEQVIVEGYSEETELLLKGRTSRQAPDIDGQVYITSGHAEIGDIVACKITDSSDYDLVAEMI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VGQTEQVIVEGYSEETELLLKGRTSRQAPDIDGQVYITSGHAEIGDIVACKITDSSDYDLVAEM
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: LKIGEGCSNCCTYCVIPSLR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: SSPGWYAYLKIGEGCSNCCTYCVIPSLRGPYRSRPVEALVAEAERLVKGGVRELILVSQDITRYGSDMDDTSSLAGLIRRLAAIEDLKWIRLLYAYPDGISDELIELFKTEPKLCNYLDIPIQHISDNVLQRMKRRSSEEQIRTLIARLRNEIPGITLRTSLIVGFPGETVDDFLNLTQFVEKAQFDRLGVFCYSREEGTPAAEMPDQVSERVKRERHRKLMKTQARVSF
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: WYAYLKIGEGCSNCCTYCVIPSLRGPYRSRPVEALVAEAERLVKGGVRELILVSQDITRYGSDMDDTSSLAGLIRRLAAIEDLKWIRLLYAYPDGISDELIELFKTEPKLCNYLDIPIQHISDNVLQRMKRRSSEEQIRTLIARLRNEIPGITLRTSLIVGFPGETVDDFLNLTQFVEKAQFDRLGVFCYSREEGTPAAEMPDQVSERVKRERHRKLM
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: KVSMVSLGCPKNLVDAEVMLGVLAQQGYEITMDEKEADVIIVNTCSFIKEAREESVDAILDLADRKSDGNCKTLVVAGCLPQRYQEELAKELPEVDILI
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: QKVSMVSLGCPKNLVDAEVMLGVLAQQGYEITMDEKEADVIIVNTCSFIKEAREESVDAILDLADRKSDGNCKTLVVAGCLPQRYQEELAKELPEVDILIGTGDYPRVAEILAEHH
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: KIGEGCSNCCTYCVIPSLRGPYRSRPVEALVAEAERLVKGGVRELILVSQDITRYGSDMDDTSSLAGLIRRLAAIEDLKWIRLLYAYPDGISDELIELFKTEPKLCNYLDIPIQHISDNVLQRMKRRSSEEQIRTLIARLRNEIPGITLRTSLIVGFPGETVDDFLNLTQ
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: RAMVGQTEQVIVEGYSEETELLLKGRTSRQAPDIDGQVYITSGHAEIGDIVACKITDSSDYDLVAEMI
type: DOMAIN
name: TRAM_dom
description: TRAM domain
Protein sequence:
MAMLVDPPNGIRQEGKHYYTMWQTLFEIDTKYVPIKPIGRGAYGVVCSSINSETNERVAIKKIHNVFENRIDALRTLRELKLLRHVRHENVISLKDVMLPTHRYSFRDVYLVYELMDSDLNQIIKSSQSLSDDHCKYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTYEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIINVVGSQQDWDLQFIDNQKARRFIKSLPFSKGTHFSHIYPHANPLAIDLLQRMLVFDPTKRISVSDALLHPYMEGLLEPECNPSENVPVSSLEIDENMEGDMIREMMWEEMLHYLPRA

Annotated regions:
phrase: FENRIDALRTLRELKLLRHVRHENVISLKDVMLPTHRYSFRDVYLVYELMDSDLNQIIKSSQSLSDDHCKYFLFQLLRGLKYLHSANILHRDLKPGNLLVNAN
type: CONSERVED_SITE
name: MAP_kinase_CS
description: Mitogen-activated protein (MAP) kinase, conserved site

phrase: YVPIKPIGRGAYGVVCSSINSETNERVAIKKIHNVFENRIDALRTLRELKLLRHVRHENVISLKDVMLPTHRYSFRDVYLVYELMDSDLNQIIKSSQSLSDDHCKYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTYEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIINVVGSQQDWDLQFIDNQKARRFIKSLPFSKGTHFSHIYPHANPLAIDLLQRMLVFDPTKRISVSDALLHPY
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: PIKPIGRGAYGVVCSSINSETNERVAIKKIHNVFENRIDALRTLRELKLLRHVRHENVISLKDVMLPTHRYSFRDVYLVYELMDSDLNQIIKSSQSLSDDHCKYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTYEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIINVVGSQQDWDLQFIDNQKARRFIKSLPFSKGTHFSHIYPHANPLAIDLLQRMLVFDPTKRISVSDALLHPY
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: IGRGAYGVVCSSINSETNERVAIK
type: BINDING_SITE
name: Protein_kinase_ATP_BS
description: Protein kinase, ATP binding site

phrase: ILHRDLKPGNLL
type: ACTIVE_SITE
name: Ser/Thr_kinase_AS
description: Serine/threonine-protein kinase, active site

phrase: YVPIKPIGRGAYGVVCSSINSETNERVAIKKIHNVFENRIDALRTLRELKLLRHVRHENVISLKDVMLPTHRYSFRDVYLVYELMDSDLNQIIKSSQSLSDDHCKYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTYEQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAEILGRKPIFPGTECLNQLKLIINVVGSQQDWDLQFIDNQKARRFIKSLPFSKGTHFSHIYPHANPLAIDLLQRMLVFDPTKRISVSDALLHPY
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain
Protein sequence:
MADDDTTARRPVLSSFGTLGRGWLGVLALLLVIGLGAWAYQLQHGLIETGMRNVFSWGLYIMLFVLFVGLSAGGLILSSAPKFFHSQRYEGFARLGVLVSLGCIIVAGLLILPDIGRPDRIYQFVTSPDFRSPMVWDFGIVMLYGALNVWYLWLLTRRDLAARGSRLSLWVSDSAAGRDRDRTLMFWTAVCALPAAVALHSVTGWIFATQVGRGDWFSPLVAPVFIAKALVSGLGLLLVVSILADRFTAFTADRGELTSLGKLLGIFLAFHVVYLLAAERLPHAWAHHFGFWAITSNFLIGDTVYFWLWTGLGGAVPLLLLATPSLRRRTAVIFTASVLAVFGTLFEGIRLVFTGYQRVNINAAPGIATGGEYAGLTTDAWATAGTYTPTAVEIAVTVGVISIGALIVMAGLRYLPLQRAAPDAAYATDGGDRTQ

Annotated regions:
Protein sequence:
MGSVRTAVVGATGAVGRAMVSILEERGFPLSELRLMASSRSAGRVVETAWGDVEIEDLDKADPAGIDIALFSAGGSRSRTFAPSFAQAGAVVVDNSSAFRMDPNVPLVVVGVNDAAVQKHRGIIANPNCTTMGLMMAVAPLHRAADVQSMVVSSYQAVSGSGQQGINELTRQLAELGEDLNALSAGGWKDPGGDVYVRPIGFNAVPFAGSEADAGYTDEEWKLVNESRKILDLPELRVEPTCVRVPVMVGHGITATLMFSRPLGVEEAVRLLGEAPGVEVWSDRVPTPLDSAGRDETLVGRIRETLGTPGGLNLWCVSDNLRKGAALNTVQIAELLL

Annotated regions:
phrase: RTAVVGATGAVGRAMVSILEERGFPLSELRLMASSRSAGRVVETAWGDVEIEDLDKADPAGIDIALFSAGGSRSRTFAPSFAQAGAVVVDNSSAFRMDPNVPLVVVGVNDAAVQK
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: APLHRAADVQSMVVSSYQAVSGSGQQGINELTRQLAELGEDLNALSAGGWKDPGGDVYVRPIGFNAVPFAGSEADAGYTDEEWKLVNESRKILDLPELRVEPTCVRVPVMVGHGITATLMFSRPLGVEEAVRLLGEAPGVEVWSDRVPTPLDSAGRDETLVGRIRETLGTPGGLNLWCVSDNLR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: TAVVGATGAVGRAMVSILEERGFPLSELRLMASSRSAGRVVETAWGDVEIEDLDKADPAGIDIALFSAGGSRSRTFAPSFAQAGAVVVDNSSAFRMDPNVPLVVVGVNDAAVQ
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MTSWQRLCWHYRLWTLGCYMLLAILALKLSLRLKCDFDAMDLDSEEFQSQYCRDLLYKTLKLPAKSSINCSGVIRGEQKAVTQALLNNLEIKKKQQLFTEADYLRMTADCEHFKTKRKFIQVPLSKEEASFPIAYSMVVHEKIENFERLLRAVYTPQNVYCVHMDQKSSEPFKQAVRAIVSCFPNVFIASKLVSVVYASWSRVQADLNCMEDLLQSPVPWKYLLNTCGTDFPIKTNAEMVKALKLLKGQNSMESEVPPPHKKSRWKYHYEVTDTLHMTSKRKTPPPNNLTMFTGNAYMVASRDFIEHVFSNSKARQLIEWVKDTYSPDEHLWATLQRASWMPGSDPLHRKFDLSDMRAIARLTKWYDHEGDIENGAPYTSCSGIHQRAVCVYGSGDLHWILQNHHLLANKFDPKVDDNVLQCLEEYLRHKAIYGTEL

Annotated regions:
Protein sequence:
MSDTIAAIATAHGVGSISIVRLSGERALEFALKLSHKTKLTPRHATFTKLFNQNNEIIDEAIMIYFKAPYSFTGEDIVEFQIHGGFSVSEVLLEELVSLGARLALAGEFSKRACLNGKMTPLKALNIQDLILSKSALAAKIIARNMQGNLGELLEKIRTDLVKTLAFVETSIDYADDDLPSDLLEQISTMCEENSKILKEIYTLSQSKKGLIEGFKIAIVGKPNVGKSSLLNALLSYERAIVSDIAGTTRDTIEESFKLGTHLLRIIDTAGIRESKDVIEQIGVALSKKSLEDADIILAVFDASRVQDKEDEKIFDLLANTDKKIFWILNKSDLENVFKNTQNKNFIKLSAQKDITLLKEELQNYLNSFDSEGIMVSSLDLINACKISSEAIFRAKGLLEESSLELFAFELNLAINELARFTKDFQRDEILDEMFGNFCLGK

Annotated regions:
phrase: GFKIAIVGKPNVGKSSLLNALLSYERAIVSDIAGTTRDTIEESFKLGTHLLRIIDTAGIRESKDVIEQIGVALSKKSLEDADIILAVFDASRVQDKEDEKIFDLLANTDKKIFWILNKSDLENVFKNTQNKNFIKLSAQKDITLLKEELQNY
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: TIAAIATAHGVGSISIVRLSGERALEFALKLSHKTKLTPRHATFTKLFNQNNEIIDEAIMIYFKAPYSFTGEDIVEFQIHGGFSVSEVLLEELVSLGARLALAGEFSKRACLNG
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal

phrase: DTIAAIATAHGVGSISIVRLSGERALEFALKLSHKTKLTPRHATFTKLFNQNNEIIDEAIMIYFKAPYSFTGEDIVEFQIHGGFSVSEVLLEELVSLGARLALAGEFSKRACLN
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal

phrase: KIAIVGKPNVGKSSLLNALLSYERAIVSDIAGTTRDTIEESFKLGTHLLRIIDTAGIRESKDVIEQIGVALSKKSLEDADIILAVFDASRVQDKEDEKIFDLLANTDKKIFWILN
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: EGFKIAIVGKPNVGKSSLLNALLSYERAIVSDIAGTTRDTIEESFKLGTHLLRIIDTAGIRESKDVIEQIGVALSKKSLEDADIILAVFDASRVQDKEDEKIFDLLANTDKKIFWILNKSDLENVFKNTQNKNFIKLSAQKDITLLKEELQNY
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain

phrase: GFKIAIVGKPNVGKSSLLNALLSYERAIVSDIAGTTRDTIEESFKLGTHLLRIIDTAGIRESKDVIEQIGVALSKKSLEDADIILAVFDASRVQDKEDEKIFDLLANTDKKIFWILNKSDLENVFKNTQNKNFIKLSAQKDITLLKEELQNYL
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain

phrase: NIQDLILSKSALAAKIIARNMQGNLGELLEKIRTDLVKTLAFVETSIDYADDDLPSDLLEQISTMCEENSKILKEIYTLSQSKKGLIEGFKIAIVGKPNVGKSSLLNALLSYERAIVSDIAGTTRDTIEESFKLGTHLLRIIDTAGIRESKDVIEQIGVALSKKSLEDADIILAVFDASRVQDKEDEKIFDLLANTDKKIFWILNKSDLENVFKNTQNKNFIKLSAQKDITLLKEELQNYLNSFDSEGIMVSSLDLINACKISSEAIFRAKGLLEESSLELFAFELNLAINELARFTKDFQRDEILDEMFGNF
type: DOMAIN
name: MnmE_helical
description: MnmE, helical domain
Protein sequence:
MGTRVPASEPTSCATGDPQTYYPEDIGGTETAQVTDCQNPEDNQPQNEPSHSNPEDSGQLMVSYEGKAEGYQVPPFGWRICLAHEFAEKRKPFNANDISLSNLIKHFGMGLRYLQWWYRKTRVEKKTPFIDLINCVPLRQIYGCPLGGIGGGTITRGWRGQFCRWQLNPGMYRHQTVIADQFTVCLRRKGQTVYQQVLSVEHPSVLRSWNWGLCGSFAFYHALYPRAWTVYQLPGQNVTLTCRQITPILPHDYQDSSLPVGVFVWDAENEGDETLDVSIMFSMRNGLGGDEDAPGGLWNEPFCLERDGETVQGLLLHHPTLPNPYTMAMAARLTADTTVTHITAFDPDGTGQQVWQDLLQDGQLDSPAGQSPPSQKGVGIAGAVCVTTRLPPGGRRRLEFSLAWDMPRIMFGAKGQVYHRRYTRFFGPDGDAAPALSHHALSRYADWEERISAWQSPVLDDRSLPAWYKSALFNELYFLADGGTVWLEVPEDSLPEDLVGSMCQLRPILQEYGRFGYLEGQEYRMYNTYDVHFYASFALIMLWPKLELSLQYDMALATLREDLTERRYLMSGITAPVKRRNVIPHDIGDPDDEPWLRVNAYVVHDTADWKDLNLKFVLQVYRDYYLTGDQVFLRDMWPVCLAVMESEMKFDKDQDGLIENGGYADQTYDGWVTTGPSAYCGGLWLAAVAVMVQMAALCGTREVQDQFSSILSRGREAYERLLWNGRYYNYDCSSQPQAYSIMSDQCAGQWFLRASGLGEGDTEVFPTP

Annotated regions:
phrase: GCPLGGIGGGTITRGWRGQFCRWQLNPGMYRHQTVIADQFTVCLRRKGQTVYQQVLSVEHPSVLRSWNWGLCGSFAFYHALYPRAWTVYQLPGQNVTLTCRQITPILPHDYQDSSLPVGVFVWDAENEGDETLDVSIMFSMRNGLGGDEDAPGGLWNEPFCLERDGETVQGLLLHHPTLPNPYTMAMAARLTADTTVTHITAFDPDGTGQQVWQDLLQDGQLDSPAGQSPPSQKGVGIAGAVCVTTRLPPGGRRRLEFSLAWDMPRIMFGAKGQVYHRRYTRFFGPDGDAAPALSHHALSRYAD
type: DOMAIN
name: GH116_N
description: Glycosyl-hydrolase family 116, N-terminal

phrase: GRFGYLEGQEYRMYNTYDVHFYASFALIMLWPKLELSLQYDMALATLREDLTERRYLMSGITAPVKRRNVIPHDIGDPDDEPWLRVNAYVVHDTADWKDLNLKFVLQVYRDYYLTGDQVFLRDMWPVCLAVMESEMKFDKDQDGLIENGGYADQTYDGWVTTGPSAYCGGLWLAAVAVMVQMAALCGTREVQDQFSSILSRGREAYERLLWNGRYYNYDCSSQPQAYSIMSDQCAGQWFLRASGLG
type: DOMAIN
name: GH116_catalytic
description: Glycosyl-hydrolase family 116, catalytic region
Protein sequence:
MPLSRTLSVSSLPGLEDWEDEFDLENSVLFEVAWEVANKVGGIYTVLQTKAKVTGDEWGDNYFLVGPYTEQGVRTQVELLEPPTPALKRTLDSMNSKGCKVYFGRWLIEGGPLVVLLDVGASAWALERWKGELWDTCNIGVPWYDREANDAVLFGFLTTWFLGEFLAQNEEKPHVVAHFHEWLAGIGLCLCRARRLPVATIFTTHATLLGRYLCAGAVDFYNNLENFNVDKEAGERQIYHRYCMERAAAHCAHVFTTVSQITAIEAQHLLKRKPDIVTPNGLNVKKFSAMHEFQNLHAQSKARIQEFVRGHFYGHLDFNLDKTLYFFIAGRYEFSNKGADVFLEALARLNYLLRVNGSEQTVVAFFIMPARTNNFNVETLKGQAVRKQLWDTANTVKEKFGRKLYESLLVGSLPDMNKMLDKEDFTMMKRAIFATQRQSFPPVCTHNMLDDSSDPILTTIRRIGLFNSSADRVKVIFHPEFLSSTSPLLPVDYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSISTNLSGFGCFMEEHIADPSAYGIYILDRRFRSLDDSCSQLTSFLYSFCQQSRRQRIIQRNRTERLSDLLDWKYLGRYYMSARHMALAKAFPDHFTYEPHEADATQGYRYPRPASVPPSPSLSRHSSPHQSEDEEEPRDGLPEEDGERYDEDEEAAKDRRNIRAPEWPRRASCTSSSGGSKRSNSVDTSSLSTPSEPLSPASSLGEERN

Annotated regions: