nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MNNKKTATNRKGMIPNRLNKFSIRKYSVGTASILVGTTLIFGLSGHEAKAAEHTNGELNQSKNEATAPSENKTTEKVDSRQQNNVEQSTTSNQPKVNESDNTSVKETTEEPQNTTSTQPTKKNNDATANKDNLAAQNISTQANDVSATPKTTTIKPRTLNRMAVNTVAAPQQGTNVNDKVHFSNIDIAIDKGHVNSTTGKTEFWATSSDVLKLKANYTIDDSVKEGDTFTFKYGQYFRPGSVRLPSQTQNLYNAQGNIIAKGIYDSTTNTTTYTFTNYVDQYTNVSGSFEQVAFAKRENATTDKTAYKMEVTLGNDAYSEEIIVDYGNKKAQPLISSTNYINNEDLSRNMTVYVNQPKNTYTKETFVSTLTGYKFNPDAKNFKIYEVTDQNQFVDSFTPDTSKLIDVTDKFKITYSNDNKTATVDLMNGQTNSNKQYIIQQVAYPDNTSTDNGKIDYTLDTDKTKYSWSNSYSSVNGSSTANGDQKKYNLGDYVWEDTNKDGKQDANEKGIKGVYVILKDSNGKELDRTTTDENGKYQFTGLGNGTYSVEFSTLAGYTPTTVNAGTDDAVDSDGLTTTGVIKDADNMTLDSGFYKTPKYSLGDYVWYDSNKDGKQDSTEKGIKGVKVTLQNEKGEVIGTTETDENGKYRFDNLDSGKYKVIFEKPAGLKQTGTNTTEDDKDADGGEVDVTITDHDDFTLDNGYFEEETSDSDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSDSDSESDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDAGKHTPVKPMSATKDHHNKAKALPETGSENNGSNNATLFGGLFAALGSLLLFGRRKKQNK

Annotated regions:
phrase: HNKAKALPETGSENNGSNNATLFGGLFAALGSLLLFGRRKKQN
type: DOMAIN
name: LPXTG_anchor
description: LPXTG cell wall anchor domain

phrase: KGMIPNRLNKFSIRKYSVGTASILVGTTLIFGLSGHEAKAA
type: DOMAIN
name: YSIRK_signal_dom
description: YSIRK Gram-positive signal peptide

phrase: SLGDYVWYDSNKDGKQDSTEKGIKGVKVTLQNEKGEVIGTTETDENGKYRFDNLDSGKYKVIFEKPAGLKQTGTNTTEDDKDADGGEVDVTITDHDDFTLDNG
type: DOMAIN
name: Sdr_B
description: SD-repeat containing protein, B domain

phrase: NLGDYVWEDTNKDGKQDANEKGIKGVYVILKDSNGKELDRTTTDENGKYQFTGLGNGTYSVEFSTLAGYTPTTVNAGTDDAVDSDGLTTTGVIKDADNMTLDS
type: DOMAIN
name: Sdr_B
description: SD-repeat containing protein, B domain

phrase: NKKAQPLISSTNYINNEDLSRNMTVYVNQPKNTYTKETFVSTLTGYKFNPDAKNFKIYEVTDQNQFVDSFTPDTSKLIDVTDKFKITYSNDNKTATVDLMNGQTNSNKQYIIQQVAYPDNTSTDNGKIDYTLDTDKTKYSWSNSYSSV
type: DOMAIN
name: Adhesin_Fg-bd_dom_2
description: Fibrinogen-binding domain 2

phrase: NRLNKFSIRKYSVGTASILVGTTLI
type: DOMAIN
name: YSIRK_signal_dom
description: YSIRK Gram-positive signal peptide

phrase: SSDVLKLKANYTIDDSVKEGDTFTFKYGQYFRPGSVRLPSQTQNLYNAQGNIIAKGIYDSTTNTTTYTFTNYVDQYTNVSGSFEQVAFAKRENATTD
type: DOMAIN
name: SDR_Ig
description: SDR-like Ig domain

phrase: LPETGSENNGSNNATLFGGLFAALGSLLLFGRRKKQN
type: DOMAIN
name: LPXTG_anchor
description: LPXTG cell wall anchor domain
Protein sequence:
MIELTKPRIVTMILVTTVASALIAGSATLTLIDWFWLMIGTALIAGSAGAANQVWECRIDRNMPRTANRPVPGGRMSYAVAVALTASSGIAGSIILWLGNGLVPACVGIATWLIYVLVYTPMKTRTAWNTTVGAIAGALPVFIGYTAAGGTLTELPGWMLFGVLACWQYPHFMAIAWLYRTQYAEAGFCMTTTVEPTGRHAAWQSILGSVALATCGVVLAWFPDGQWVASAASVLATVLILAASWPLLRASLNFRANPNDKTARKMLRWSLVVLPAVLLVMTLRASL

Annotated regions:
phrase: NQVWECRIDRNMPRTANRPVPG
type: CONSERVED_SITE
name: UbiA_prenylTrfase_CS
description: UbiA prenyltransferase conserved site
Protein sequence:
MVMFKKIKSFEVVFNDPEKVYGSGEKVAGRVTVEVCEVTRVKAVRILACGVAKVLWMQGSQQCKQTLDYLRYEDTLLLEDQPTGENEMVIMRPGNKYEYKFGFELPQGPLGTSFKGKYGCVDYWVKAFLDRPSQPTQEAKKNFEVMDLVDVNTPDLMAPVSAKKEKKVSCMFIPDGRVSVSARIDRKGFCEGDDISIHADFENTCSRIVVPKAAIVARHTYLANGQTKVLTQKLSSVRGNHIISGTCASWRGKSLRVQKIRPSILGCNILRVEYSLLIYVSVPGSKKVILDLPLVIGSRSGLSSRTSSMASRTSSEMSWIDLNIPDTPEAPPCYMDVIPEDHRLESPTTPLLDDVDDSQDSPIFMYAPEFQFMPPPTYTEVDPCVLNNNNNNVQ

Annotated regions:
phrase: PDGRVSVSARIDRKGFCEGDDISIHADFENTCSRIVVPKAAIVARHTYLANGQTKVLTQKLSSVRGNHIISGTCASWRGKSLRVQKIRPSILGCNILRVEYSLLIYVSVPGSKKVILDLPLVIGSRS
type: DOMAIN
name: Arrestin_C-like
description: Arrestin C-terminal-like domain

phrase: FEVVFNDPEKVYGSGEKVAGRVTVEVCEVTRVKAVRILACGVAKVLWMQGSQQCKQTLDYLRYEDTLLLEDQPTGENEMVIMRPGNKYEYKFGFELPQGPLGTSFKGKYGCVDYWVKAFLDRPSQPTQEAKKNFEVMDLVDV
type: DOMAIN
name: Arrestin-like_N
description: Arrestin-like, N-terminal

phrase: DGRVSVSARIDRKGFCEGDDISIHADFENTCSRIVVPKAAIVARHTYLANGQTKVLTQKLSSVRGNHIISGTCASWRGKSLRVQKIRPSILGCNILRVEYSLLIYVSVPGSKKVILDLPLVIG
type: DOMAIN
name: Arrestin_C-like
description: Arrestin C-terminal-like domain
Protein sequence:
MKTSRRGRALLAVALNLLALLFATTAFLTTHWCQGTQRVPKPGCGQGGRANCPNSGANATANGTAAPAAAAAAATASGNGPPGGALYSWETGDDRFLFRNFHTGIWYSCEEELSGLGEKCRSFIDLAPASEKGVLWLSVVSEVLYILLLVVGFSLMCLELFHSSNVIDGLKLNAFAAVFTVLSGLLGMVAHMMYTQVFQVTVSLGPEDWRPHSWDYGWSFCLAWGSFTCCMAASVTTLNSYTKTVIEFRHKRKVFEQGYREEPTFIDPEAIKYFRERMEKRDGSEEDFHLDCRHERYPARHQPHMADSWPRSSAQEAPELNRQCWVLGHWV

Annotated regions:
Protein sequence:
MELFELTIHELHDKLKKKEVSSVEATRALLARIDAVEPRVNAFITVTPEEALKNAEAADRRIAAGDMQLLTGIPIALKDIFLTKGVRTTCASRILDNFIPPYDATSVARLKAQGMVLVGKLNQDEFAMGSSTESSYYGKTHNPWNLECIPGGSSGGSAAAIAARQAIATLGTDTGGSIRQPASHCGCVGLKPTYGRVSRYGVIAYASSLDQVGPVTRDVTDCAIMLGAVAGFDPKDSTSVDLPVPDYSKALSNDVKGLKIGLPKEYFIAGLDPDVQKTMDAAIETYKGLGAQFVEISLPHTDYAVATYYLIATAEASSNLARYDGVRFGHRSSEAQGLIDMYRKSRSEGFGEEVKRRIMLGTYALSSGYYDAYYLKAQKVRTLIMQDFSRAFEEVDVILTPVAPTPAFRIGEKSADPLQMYLSDIFTIPVNLAGTCGMSIPAGFSKDGLPVGLQLVGRPFGEECILRAAYAFEQNTDWHERKASL

Annotated regions:
phrase: EATRALLARIDAVEPRVNAFITVTPEEALKNAEAADRRIAAGDMQLLTGIPIALKDIFLTKGVRTTCASRILDNFIPPYDATSVARLKAQGMVLVGKLNQDEFAMGSSTESSYYGKTHNPWNLECIPGGSSGGSAAAIAARQAIATLGTDTGGSIRQPASHCGCVGLKPTYGRVSRYGVIAYASSLDQVGPVTRDVTDCAIMLGAVAGFDPKDSTSVDLPVPDYSKALSNDVKGLKIGLPKEYFIAGLDPDVQKTMDAAIETYKGLGAQFVEISLPHTDYAVATYYLIATAEASSNLARYDGVRFGHRSSEAQGLIDMYRKSRSEGFGEEVKRRIMLGTYALSSGYYDAYYLKAQKVRTLIMQDFSRAFEEVDVILTPVAPTPAFRIGEKSADPLQMYLSDIFTIPVNLAGTCGMSIPAGFSKDGLPVGLQLVGRPFGEECI
type: DOMAIN
name: Amidase_dom
description: Amidase signature domain

phrase: GGSSGGSAAAIAARQAIATLGTDTGGSIRQP
type: CONSERVED_SITE
name: Amidase_CS
description: Amidase, conserved site
Protein sequence:
MAKEHNHLQDVFLNTLRKERIPVSVFLVNGIKLMGRIESFDQFVVLLKGQDQAAQMIFKHAISTISPSREVVLPQRDAEA

Annotated regions:
phrase: DVFLNTLRKERIPVSVFLVNGIKLMGRIESFDQFVVLLKGQDQAAQMIFKHAISTISPSRE
type: DOMAIN
name: Sm
description: Sm domain
Protein sequence:
MKALQKEATKAMKPSLLSLTYEGCKEWMKENGEPAFRAKQVFEWLYQKRVESMEEMTNLPKALRAKLQETFTMTRLREKLRQTSTDGTIKFLFELEDNYSIETVLMRHDYGNSLCVTTQVGCRLGCTFCASGLGGLQRNLEAGEIVAQVLDVQRALDQSEERIDSIVVMGIGEPFDNYDNLMAFLRTVNDDEGLNIGARHITVSTSGMVPKIYRFADEGLQINFAVSLHAPNSEIRGRLMPINRAFPVHKLMDAIDYYQQKTNRRITYEYGLFGGVNDQVEHAEELADLIGHTKGHVNLIPVNDVPEKDYVRSTRADIFAFERTLKARGINVTIRREQGHDIDAACGQLRAKETG

Annotated regions:
phrase: TTQVGCRLGCTFCASGLGGLQRNLEAGEIVAQVLDVQRALDQSEERIDSIVVMGIGEPFDNYDNLMAFLRTVNDDEGLNIGARHITVSTSGMVPKIYRFADEGLQINFAVSLHAPNSEIRGRLMPINRAFPVHKLMDAIDYYQQKTNRRITYEYGLFGGVNDQVEHA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: HDYGNSLCVTTQVGCRLGCTFCASGLGGLQRNLEAGEIVAQVLDVQRALDQSEERIDSIVVMGIGEPFDNYDNLMAFLRTVNDDEGLNIGARHITVSTSGMVPKIYRFADEGLQINFAVSLHAPNSEIRGRLMPINRAFPVHKLMDAIDYYQQKTNRRITYEYGLFGGVNDQVEHAEELADLIGHTKGHVNLIPVNDVPEKDYVRSTRADIFAFERTLKARGINVTIRREQGH
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LLSLTYEGCKEWMKENGEPAFRAKQVFEWLYQKRVESMEEMTNLPKALRAKLQET
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MFSDIEIARQAKLRKISEIAAELGLNEDSITLYGQYKAKIDLNANPQLQAQPDGKLILVTAISPSPAGEGKTTTTVGLGDALQRMGKRAVICLREPSMGPVFGMKGGAAGGGYAQVVPMEDINLHFTGDFASIALAHNLLAAMIDNHIHHGNALQIDPRQVTWKRVIDMNDRALRQVVIGLGGKVNGQPREDGFDIVVASEVMAVFCLADSLKDLRTRLGRIVVGYTYSGQPVTAQDLKAHGAMTVLLKDAIKPNLVQTLEHTPALLHGGPFANIAHGCNSVIATRTALKLGDYVVTEAGFGADLGAEKFIDIKCRKAGLHPDACVIVATIRALKYHGGADVSALSREDMLALDRGIANLEKHVENVTTHYGMPAVIALNRFDHDTEAELALVMKRMGEMGIKVVVAEHWAKGGAGAESLAAHVLQLIEGRSEGVRYVYESSETLWEKVNQVARKIYGAMDVHAPRPVRAMIDRLQDAGYGHYPICIAKTQYSFSTDASRRGVPHEHILTVRAVRLCAGAEFVVIICDDIMTMPGLPEEPCAIRMDIDDDGQVVGLY

Annotated regions:
phrase: VATIRALKYHG
type: CONSERVED_SITE
name: Formate_THF_ligase_CS
description: Formate-tetrahydrofolate ligase, FTHFS, conserved site

phrase: GMKGGAAGGG
type: CONSERVED_SITE
name: Formate_THF_ligase_CS
description: Formate-tetrahydrofolate ligase, FTHFS, conserved site
Protein sequence:
MAAPQDVHVRICNQEIVKFDLEVKALIQDIRDCSGPLSALTELNTKVKEKFQQLRHRIQDLEQLAKEQDKESEKQLLLQEVENHKKQMLSNQASWRKANLTCKIAIDNLEKAELLQGGDLLRQRKTTKESLAQTSSTITESLMGISRMMAQQVQQSEEAMQSLVTSSRTILDANEEFKSMSGTIQLGRKLITKYNRRELTDKLLIFLALALFLATVLYIVKKRLFPFL

Annotated regions:
phrase: TSSTITESLMGISRMMAQQVQQSEEAMQSLVTSSRTILDANEEFKSMSGTIQLGRKLITKYNRRELTDKLLIFLALALFLATVLYIVKKR
type: DOMAIN
name: Sec20_C
description: Sec20, C-terminal
Protein sequence:
MSFTTLYSAIQGDASARALVAPSLNAELSFSELRIAIMDLQRQIASLGIKVGDPVNIAIPNGLEFVVAFYAVSWQRAICGPLNSNYKQSEFEFYIDDLKSKLVIVPEGSVAANTPAVRAAKKLSVAVAELAWCPKSRLVRIVHFEGAKINAPQPLGLPQPDDVMLVLHTSGTTGRPKVVPLTHKNLCRSIHNITTSYRLDPRDTSYVVMPLFHVHGLLCGLLSTLASGGCAVVPPKFSAHSFWKEFIQYGATWYTAVPTIHQILLRTPPPKPLPRIRFIRSCSSPLAPPVLSKLEATFRAPVLEAYAMTEASHQMTTNPLPPLVHKPHSVGKPFGVELKILDQKGNEMPQGKEGEICVRGINVTKGYLNNPAANKSSFTKDRFFRTGDEGKLDKDGYVFITGRIKELVNRGGEKISPAEIDAVLMQHPDVSEAVCFAVPDEKYGQDIQAAINPVAGKTVTPKQLHDYLEQKVAAFKIPKKFYFTDRIPKTATGKVQRRLVCDAFFNHSKAKL

Annotated regions:
phrase: VLHTSGTTGRP
type: CONSERVED_SITE
name: AMP-binding_CS
description: AMP-binding, conserved site

phrase: SARALVAPSLNAELSFSELRIAIMDLQRQIASLGIKVGDPVNIAIPNGLEFVVAFYAVSWQRAICGPLNSNYKQSEFEFYIDDLKSKLVIVPEGSVAANTPAVRAAKKLSVAVAELAWCPKSRLVRIVHFEGAKINAPQPLGLPQPDDVMLVLHTSGTTGRPKVVPLTHKNLCRSIHNITTSYRLDPRDTSYVVMPLFHVHGLLCGLLSTLASGGCAVVPPKFSAHSFWKEFIQYGATWYTAVPTIHQILLRTPPPKPLPRIRFIRSCSSPLAPPVLSKLEATFRAPVLEAYAMTEASHQMTTNPLPPLVHKPHSVGKPFGVELKILDQKGNEMPQGKEGEICVRGINVTKGY
type: DOMAIN
name: AMP-dep_synth/lig_dom
description: AMP-dependent synthetase/ligase domain

phrase: EIDAVLMQHPDVSEAVCFAVPDEKYGQDIQAAINPVAGKTVTPKQLHDYLEQKVAAFKIPKKFYFTDRIPKTATG
type: DOMAIN
name: AMP-bd_C
description: AMP-binding enzyme, C-terminal domain
Protein sequence:
MKVTGTQTNWPNWWKWVTLILGLVIICKASDNLWVTVYYGVPVWRDADTTLFCASDAKAHETEAHNVWATHACVPTDPNPQEINMPNVTENFNMWKNNMVEQMQEDVISLWDQSLKPCVKLTPFCVTLNCTDAKLTNNTTNDNNTIDIGDIKEEVRNCSFNTTTALKDKKQSTHALFYRLDLVQIDNSNSNGSRHYSDYRLINCNTSVIKQACPKTSFDPIPIHYCTPAGYAIFKCNDKKFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEDEIIIRSENLTNNAKIIIVHLNKSVEINCTRPSNNTRTSMTVGPGQVLYKTGDITGDIRKAFCVINGTKWNETLKKVAEKLKEHFNNKIIRFQPPSGGDLETTMHHFNCRGEFFYCNTSGIFNSTWGNGTTGGNSSDIILPCRIKQIVRMWQGVGQAMYNPPIRGAINCVSNITGILLTRDGGSETNGTEIFRPGGGNIKDNWRSELYKYKVVQIEPLGIAPSRAKRRVVEREKRAVGIGAMIFGFLGAAGSTMGAASLTLTVQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQKFLGLWGCSGKIICTTAVPWNSTWSNKSHDEIWENMTWVEWEREIANYTNQIYDLLTESQNQQDNNEKELLELDKWASLWNWFNITQWLWYIKIFIMIVGGLIGLRIIFAVLSIVRRVRQGYSPLSFQTPTHHQREPDRPERTEEGGGEQDRDRSVRLVSGFLALAWDDLRSLCLFSYH

Annotated regions:
phrase: LWVTVYYGVPVWRDADTTLFCASDAKAHETEAHNVWATHACVPTDPNPQEINMPNVTENFNMWKNNMVEQMQEDVISLWDQSLKPCVKLTPFCVTLNCTDAKLTNNTTNDNNTIDIGDIKEEVRNCSFNTTTALKDKKQSTHALFYRLDLVQIDNSNSNGSRHYSDYRLINCNTSVIKQACPKTSFDPIPIHYCTPAGYAIFKCNDKKFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEDEIIIRSENLTNNAKIIIVHLNKSVEINCTRPSNNTRTSMTVGPGQVLYKTGDITGDIRKAFCVINGTKWNETLKKVAEKLKEHFNNKIIRFQPPSGGDLETTMHHFNCRGEFFYCNTSGIFNSTWGNGTTGGNSSDIILPCRIKQIVRMWQGVGQAMYNPPIRGAINCVSNITGILLTRDGGSETNGTEIFRPGGGNIKDNWRSELYKYKVVQIEPLGIAPSRAKRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: VQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQKFLGLWGCSGKIICTTAVPWNSTWSNKSHDEIWENMTWVEWEREIANYTNQIYDLLTESQNQQDNNEKELLELD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASLTLTVQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQKFLGLWGCSGKIICTTAVPWNSTWSNKSHDEIWENMTWVEWEREIANYTNQIYDLLTESQNQQDNNEKELLELDKWASLWNWFNITQWLWYIKIFIMIVGGLIGLRIIFAVLSIVRRVRQGYSPLSFQTP
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MAEYTHYFIQYNLTDIFYEDVNIEKYSCSICYESVYKKEIYQCKEIHWFCKTCWAESLFKKKECMICRCIVKSISELSRNRFIEQDFLNIKVNCPNSFKYIDENKNNNNKIKDLENGCKDIITIGEIEKHLKQCKFTHIKCKFIGCNKIIRLNQVEKHEKEQCEFRLEYCRYCDTDGITSRSLENHYKECPKFIVKCSENGCTVQLERSQLESHIEKQCQMVMIDCPYKIYGCEQSNRFPKSNLTQHLSSINHTLAMGSMIESQSLQIKETNIKYENLLNKINKLEQLETESKCDQLYDKFYQFESKIDKKLNNLQLDLYPKDNQQPQQKEQKEQKEQKEQQERIKFDDLFEKVSKVNSYFINGCLLKYKNRWSISNYLTESRKYRKITSPSFKIYDKKFKLVIYPQGKDDGSYTSLFLKSDSINPIKVFYKFVLLNFKDESKNLIFKNKSIMDKEKSVGCHYFIKSTEPGKKPEVWLKDDSLVIDFSIEVNINNDIKPLES

Annotated regions:
phrase: YCDTDGIT
type: CONSERVED_SITE
name: DNA-dir_DNA_pol_B_CS
description: DNA-directed DNA polymerase, family B, conserved site

phrase: HYKECPKFIVKCSENGCTVQLERSQLESHIEKQCQMVMIDCPYKIYGCEQSNRFPKSNLTQ
type: DOMAIN
name: Znf_TRAF
description: Zinc finger, TRAF-type

phrase: NGCKDIITIGEIEKHLKQCKFTHIKCKFIGCNKIIRLNQVEK
type: DOMAIN
name: Znf_TRAF
description: Zinc finger, TRAF-type

phrase: KNRWSISNYLTESRKYRKITSPSFKIYDKKFKLVIYPQGKDDGSYTSLFLKSDSINPIKVFYKFVLLNFKDESKNLIFKNKSIMDKEKSVGCHYFIKSTEPGKKPEVWLKDDSLVIDFSI
type: DOMAIN
name: MATH/TRAF_dom
description: MATH/TRAF domain

phrase: HLKQCKFTHIKCKFIGCNKIIRLNQVEKHEKEQCEFRLEYCRY
type: DOMAIN
name: Znf_TRAF
description: Zinc finger, TRAF-type

phrase: KYKNRWSISNYLTESRKYRKITSPSFKIYDKKFKLVIYPQGKDDGSYTSLFLKSDSINPIKVFYKFVLLNFKDESKNLIFKNKSIMDKEKSVGCHYFIKSTEPGKKPEVWLKDDSLVIDFS
type: DOMAIN
name: MATH/TRAF_dom
description: MATH/TRAF domain

phrase: HYKECPKFIVKCSENGCTVQLERSQLESHIEKQCQMVMIDCPYKIYG
type: DOMAIN
name: Znf_TRAF
description: Zinc finger, TRAF-type

phrase: WSISNYLTESRKYRKITSPSFKIYDKKFKLVIYPQGKDDGSYTSLFLKSDSINPIKVFYKFVLLNFKDESKNLIFKNKSIMDKEKSVGCHYFIKSTEPGKKPEVWLKDDSLVIDF
type: DOMAIN
name: MATH/TRAF_dom
description: MATH/TRAF domain
Protein sequence:
MNLVGSYAHHHHHHHPHPAHPMLHEPFLFGPASRCHQERPYFQSWLLSPADAAPDFPTGGPPPTAAAAAATYGPDTRPGQSPGRLEALGGRLGRRKGSGPKKERRRTESINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDVLAKDAQAGDPEAFKAELKKVDGGRESKRKRELQQHEGFPPALGPGEKRIKGRTGWPQQVWALELNQ

Annotated regions:
phrase: RRKGSGPKKERRRTESINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAY
type: DOMAIN
name: bHLH_dom
description: Myc-type, basic helix-loop-helix (bHLH) domain

phrase: GSGPKKERRRTESINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAY
type: DOMAIN
name: bHLH_dom
description: Myc-type, basic helix-loop-helix (bHLH) domain

phrase: PKKERRRTESINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDVLA
type: DOMAIN
name: bHLH_dom
description: Myc-type, basic helix-loop-helix (bHLH) domain
Protein sequence:
MRLKISLLKEPKHQELVSCVGWTTAEELYSCSDDHQIVKWNLLTSETSLIVKLPDDIYPIDLHWFPKSLGIKKQTQAESFVLTSSDGKFHLISKLGRVEKSVEAHCGAVLAGRWNYEGTALVTVGEDGQVKIWSKTGMLRSTLAQQGIPVYSVAWGPDSEKVLYTAGKQLIIKPLQPNAKVLQWKAHDGIILKVDWNSVNDLILSAGEDCKYKVWDSYGRVLYGSQPHEHPITSVAWAPDGELFAVGSFHTLRLCDKTGWSYALEKPNTGSIFNIAWSIDGTQIAGACGNGHVVFAHVVEQRWEWKNFQVTLTKRRTMQVRNVLNDAVDLLEFRDRVIKASLNHAHLVVSTSLQCYVFSTKNWNTPLIFDLKEGTVSLILQAERHFLLVDGGGIYLHSYEGRFISSPKFPGMRTDILNAQTVSLSNDTIAIKDKADEKIIFLFEASTGKPLGDGKLLSHKNEISEVALDQKGLTNDRKIAFIDKNRDLYITSVKRFGKEEQIIKLGTMVHTLAWCDTCNILCGLQDTRFTVWYYPNAVYVDRDILPKTLYERDASEYSKNPHIVSFVGNQVTVRRADGSLVHISISPYPAILHEYVSSSKWEDAVRLCRFVKEQSLWACLAAMAVANRDMVTAEIAYAAVGEIDKVRYINAMKDLPSRESKMAHILMFSGNIQEAETILLQAGLVYQAIQININLYNWERALELAVKYKTHVDTVLAYRQKFLETFGKQETNKRYLQYAEGLQIDWEKIKAKIEMEITKERDRSSSGQSSKNTGLKP

Annotated regions:
phrase: EQRWEWKNFQVTLTKRRTMQVRNVLNDAVDLLEFRDRVIKASLNHAHLVVSTSLQCYVFSTKNWNTPLIFDLKEGTVSLILQAERHFLLVDGGGIYLHSYEGRFISSPKFPGMRTDILNAQTVSLSNDTIAIKDKADEKIIFLFEASTGKPLGDGKLLSHKNEISEVALDQKGLTNDRKIAFIDKNRDLYITSVKRFGKEEQIIKLGTMVHTLAWCDTCNILCGLQDTRFTVWYYPNAVYVDRDILPKTLYERDASEYSKNPHIVSFVGNQVTVRRADGSLVHISISP
type: DOMAIN
name: Beta-prop_IFT80_2nd
description: IFT80, second beta-propeller domain

phrase: PNAKVLQWKAHDGIILKVDWNSVNDLILSAGEDCKYKVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LGRVEKSVEAHCGAVLAGRWNYEGTALVTVGEDGQVKIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: KISLLKEPKHQELVSCVGWTTAEELYSCSDDHQIVKW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: TGMLRSTLAQQGIPVYSVAWGPDSEKVLYTAGKQLIIKPL
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: TGWSYALEKPNTGSIFNIAWSIDGTQIAGACGNGHVVFA
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: GRVLYGSQPHEHPITSVAWAPDGELFAVGSFHTLRLC
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: VEAHCGAVLAGRWNYEGTALVTVGEDGQVKIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LWACLAAMAVANRDMVTAEIAYAAVGEIDKVRYINAMKDLPSRESKMAHILMFSGNIQEAETILLQAGLVYQAIQININLYNWERALELAVKYKTHVDTVLAYRQKFLETFGKQETNKRYLQYAEGLQIDWEKIKAKIEMEITKE
type: DOMAIN
name: TPR_IFT80_172_dom
description: IFT80/172/WDR35, TPR domain

phrase: WKAHDGIILKVDWNSVNDLILSAGEDCKYKVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: EKSVEAHCGAVLAGRWNYEGTALVTVGEDGQVKIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: PHEHPITSVAWAPDGELFAVG
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LQWKAHDGIILKVDWNSVNDLILSAGEDCKYKVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat
Protein sequence:
MGFVLVPKSDFQIPLEADTIRPDLFEGLDLDEIRSLQVYEGNIKRPLGEFFEIAETPHADQLIRIDGDVSRVKYIGSGMKSGKIIINGDVGLQLGCEMKGGEIEVNGNVSSWIGMEMHGGTIKINGNAGDYVGCAYRGEWRGMKGGKIIIQGNAGNNIGGGMMAGEIYIGGDAGNFCGIRMNGGEITVRGDAGRAPGAEMVSGIIKIHGRISSLLPGFKEISTFKEDGSLMILFKGDLSEKNPEGNLYINYNKNLHILENETDEGRVITKKGIKVIYNSGSTIREGQIIKGGNKLTDDYIDECARCCISPEDYKLLGEPENVVVSSHGNEVVLRAVEDPGIQMGTIFIPRGIWANVLTPPYTESTGSPMYKGVPVYLRKASQGERILSAEELVEEYGVGK

Annotated regions:
phrase: VLVPKSDFQIPLEADTIRPDLFEGLDLDEIRSLQVYEGNIKRPLGEFFEIAETPHADQLIRIDGDVSRVKYIGSGMKSGKIIINGDVGLQLGCEMKGGEIEVNGNVSSWIGMEMHGGTIKINGNAGDYVGCAYRGEWRGMKGGKIIIQGNAGNNIGGGMMAGEIYIGGDAGNFCGIRMNGGEITVRGDAGRAPGAEMVSGIIKIHGRISSLLPGFKEISTFKEDGSLMILFKGDLSE
type: DOMAIN
name: Formylmethanofuran_DH_suC
description: Formylmethanofuran dehydrogenase subunit C

phrase: IKVIYNSGSTIREGQIIKGGNKLTDDYIDECARCCISPEDYKLLGEPENVVVSSHGNEVVLRAVEDPGIQMGTIFIPRGIWANVLTPPYTESTGSPMYKGVPVY
type: DOMAIN
name: FmdC/FwdD_MopB-bd
description: FwdD/FmdC, molybdopterin dinucleotide-binding domain

phrase: KRPLGEFFEIAETPHADQLIRIDGDVSRVKYIGSGMKSGKIIINGDVGLQLGCEMKGGEIEVNGNVSSWIGMEMHGGTIKINGNAGDYVGCAYRGEWRGMKGGKIIIQGNAGNNIGGGMMAGEIYIGGDAGNFCGIRMNGGEITVRGDAGRAPGAEMVSGIIKIHGRISSLLPGFKEISTFKEDGSLMILFKGD
type: DOMAIN
name: Formylmethanofuran_DH_suC
description: Formylmethanofuran dehydrogenase subunit C

phrase: IYNSGSTIREGQIIKGGNKLTDDYIDECARCCISPEDYKLLGEPENVVVSSHGNEVVLRAVEDPGIQMGTIFIPRGIWANVLTPPYTESTGSPMYKGV
type: DOMAIN
name: MoPterin_dinucl-bd_dom
description: Molybdopterin dinucleotide-binding domain
Protein sequence:
MPENYTPAAAATGTWTEEEIRHQPRAWIRSLTNIDALRSALNNFLEPLLRKENLRIILTGAGTSAFIGDIIAPWLASHTGKNFSAVPTTDLVTNPMDYLNPAHPLLLISFGRSGNSPESVAAVELANQFVPECYHLPITCNEAGALYQNAINSDNAFALLMPAETHDRGFAMTSSITTMMASCLAVFAPETINSQTFRDVADRCQAILTSLGDFSEGVFGYAPWKRIVYLGSGGLQGAARESALKVLELTAGKLAAFYDSPTGFRHGPKSLVDDETLVVVFVSSHPYTRQYDLDLLAELRRDNQAMRVIAIAAESSDIVAAGPHIILPPSRHFIDVEQAFCFLMYAQTFALMQSLHMGNTPDTPSASGTVNRVVQGVIIHPWQA

Annotated regions:
phrase: SEGVFGYAPWKRIVYLGSGGLQGAARESALKVLELTAGKLAAFYDSPTGFRHGPKSLVDDETLVVVFVSSHPYTRQYDLDLLAELRRDNQAMRVIAIAAESSDIVAAGPHIILPPSRHFIDVEQAFCFLMYAQTFALMQSLHMGNTPDT
type: DOMAIN
name: SIS_dom
description: SIS domain

phrase: RIILTGAGTSAFIGDIIAPWLASHTGKNFSAVPTTDLVTNPMDYLNPAHPLLLISFGRSGNSPESVAAVELANQFVPECYHLPITCNEAGALYQNAINSDNAFALLMPAETHDRGFAMTSSITTMMASCLAV
type: DOMAIN
name: GlmS/AgaS_SIS
description: GlmS/AgaS, SIS domain 1

phrase: LEPLLRKENLRIILTGAGTSAFIGDIIAPWLASHTGKNFSAVPTTDLVTNPMDYLNPAHPLLLISFGRSGNSPESVAAVELANQFVPECYHLPITCNEAGALYQNAINSDNAFALLMPAETHDRGFAMTSSITTMMASCLAVFAPETINSQT
type: DOMAIN
name: SIS_dom
description: SIS domain

phrase: LRKENLRIILTGAGTSAFIGDIIAPWLASHTGKNFSAVPTTDLVTNPMDYLNPAHPLLLISFGRSGNSPESVAAVELANQFVPECYHLPITCNEAGALYQNAINSDNAFALLMPAETHDRGFAMTSSITTMMASCLAV
type: DOMAIN
name: SIS_dom
description: SIS domain

phrase: APWKRIVYLGSGGLQGAARESALKVLELTAGKLAAFYDSPTGFRHGPKSLVDDETLVVVFVSSHPYTRQYDLDLLAELRRDNQAMRVIAIAAESSDIVAAGPHIILPPSRHFIDVEQAFCFLMYAQTFALMQSLH
type: DOMAIN
name: SIS_dom
description: SIS domain

phrase: IVYLGSGGLQGAARESALKVLELTAGKLAAFYDSPTGFRHGPKSLVDDETLVVVFVSSHPYTRQYDLDLLAELRRDNQAMRVIAIAAESSDIVAAGPHIILPPSRHFIDVEQAFCFLMYAQTFALMQSLHMGNTPDTPSASGTVNRVVQG
type: DOMAIN
name: SIS_AgaS
description: AgaS, SIS domain
Protein sequence:
MVSGSFDIGDLKRRMQGATQSLKHELGGLRTGRASSSMLDPVQVDAYGSHMPLNQVATISVPEPRLLSVQVWDKSMVKAVEKAIVDSNLGLSPATEGQVLRLRIPELNEERRKELVKVAHKYAEAAKVAVRHVRRDGLDTLKKLEKNHEISEDDEKRLANDVQKATDSVISEIDQLLAGKEKEILTV

Annotated regions:
phrase: LKHELGGLRTGRASSSMLDPVQVDAYGSHMPLNQVATISVPEPRLLSVQVWDKSMVKAVEKAIVDSNLGLSPATEGQVLRLRIPELNEERRKELVKVAHKYAEAAKVAVRHVRRDGLDTLKKLEKNHEISEDDEKRLANDVQKATDSVISEIDQLLAGKEKEI
type: DOMAIN
name: Ribosome_recyc_fac_dom
description: Ribosome recycling factor domain
Protein sequence:
MLLTAPSSRGSRTQSGIANVSWWALSLLLLFSPTLVSAKSAADYYVRSLPGAPEGPLLKMHAGHIEVDAQNNGNLFFWHYQNRHIANRQRTVIWLNGGPGCSSMDGALMEIGPYRLKDNHTLEYNNGSWDEFANLLFVDQPVGTGFSYVSTNSYIHELDEMSAQFITFLEKWFQLFPEYEGDDIYIAGESYAGQHIPYIAKAIQERNNKIQNDQSVRWNLRGIVIGNGWISPAQQYPSYLTFAYEEGLVTEGSSLAKDLEVYQSVCESKISASPNAINIRDCEEILQQILARTKDTNRQCYNMYDVRLRDTYPSCGMNWPTDLVDVKPYLQRPDVVQALNINPEKKSGWEECSGAVSSTFNAANSLPSVQLLPELLESGIPILLFSGDKDLICNHVGTEQLINNMKWNGGTGFETSPGVWAPRHDWTFEGEPTGIYQYARNLTYVLFYNASHMVPYDLPRQSRDMLDRFMKVDIANIGGKPADSRIDGEKLPQTSVGGHPNSTAAEQQAKEKIKETEWKAYAKSGEAALIVVIIGVTVWGFFIWRSRRRNRGYQGVYQRDVGSGSILERFHNKRSGPADVEAGDFDESELDNLHSPGPEQEHYAVGDDSDEEGPNHHPAAPPSSTKPGGAQP

Annotated regions:
phrase: IAGESYA
type: ACTIVE_SITE
name: Ser_caboxypep_ser_AS
description: Serine carboxypeptidase, serine active site
Protein sequence:
MGQKIHPFGFRLSVQKNWSSRWYANSNNFPAMLSSDIKVREFLKKKLAHAAVSKIVIERPAKNAKITIYSARPGIVIGKKGEDIESLRSGLQGLMGVPVHLNIEEVRKPEIDATLIAESIAQQLEKRVMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRADIDYGVAEAKTTYGIIGIKVWVFKGEVFGNKIEQAAQPAEPEKKVRKSGAKNAATS

Annotated regions:
phrase: PAKNAKITIYSARPGIVIGKKGEDIESLRSGLQGLMGVPVHLNIEEVRKPEIDATLIAESIAQQL
type: DOMAIN
name: KH_dom
description: K Homology domain

phrase: ARTEWYREGRVPLHTLRADIDYGVAEAKTTYGII
type: CONSERVED_SITE
name: Ribosomal_uS3_CS
description: Small ribosomal subunit protein uS3, conserved site

phrase: IAQQLEKRVMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRADIDYGVAEAKTTYGIIGIKVW
type: DOMAIN
name: Ribosomal_uS3_C
description: Small ribosomal subunit protein uS3, C-terminal

phrase: KVREFLKKKLAHAAVSKIVIERPAKNAKITIYSARPGIVIGKKGEDIESLRSGLQGLMGVPVHLNIEEVRKP
type: DOMAIN
name: KH_dom_type_2
description: K Homology domain, type 2

phrase: VREFLKKKLAHAAVSKIVIERPAKNAKITIYSARPGIVIGKKGEDIESLRSGLQGLMGVPVHLNIEEV
type: DOMAIN
name: KH_dom_type_2
description: K Homology domain, type 2
Protein sequence:
MYKMEYSYLNSSAYESCMAGMDTSSLASAYADFSSCSQASGFQYNPIRTTFGATSGCPSLTPGSCSLGSLRDHQSSPYAAVPYKLFTDHGGLNEKRKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELASPDSLPFGEHWGRDWFDGERRDRDRVTETGGAPQHLFQAASAPGRPEPGRRAGWGRGAEDASALTFCSCLGPRKRPKLSDIR

Annotated regions:
phrase: QRRIRTTFTSAQLKELERVFAETHYPDIYTREELASPDSLPFGEHWGRDWFDGERRDRDRVTETG
type: DOMAIN
name: HD
description: Homeodomain

phrase: RRIRTTFTSAQLKELERVFAETHYPDIYTREELA
type: DOMAIN
name: HD
description: Homeodomain

phrase: RKQRRIRTTFTSAQLKELERVFAETHYPDIYTREELASPDSLPFGEHWGRDWFDGERRDRDR
type: DOMAIN
name: HD
description: Homeodomain

phrase: RRIRTTFTSAQLKELERVFAETHYPDIYTREEL
type: DOMAIN
name: HD
description: Homeodomain
Protein sequence:
MESRQDITNQEELWKMKPRKNLEDDYLNEDSRENSMPKRPMLVHLHQTAHFDEFDCPPELQHKQELFPKWHLPIKIAAIVSSLTFLYTLLREVIHPFVTSHQQYFYKIPILVINKVLPMVSITLLALVYLPGVIAAIVQLHNGTKYKKFPHWLDRWMVTRKQFGLLSFFFAVLHAVYSLSYPMRRSYRYKLLNWAYQQVQQNKEDAWIEHDVWRMEIYVSLGIVTLAILALLAVTSIPSVSDSLTWREFHYIQSTLGIVSLLLGTIHALIFAWNKWVDIKQFIWYTPPTFMIAVFLPTVVLICKVILLLPCLRRKILKIRHGWEDVTKINKTEMSSQL

Annotated regions:
phrase: MVSITLLALVYLPGVIAAIVQLHNGTKYKKFPHWLDRWMVTRKQFGLLSFFFAVLHAVYSLSYPMRRSYRYKLLNWAYQQVQQNKEDAWIEHDVWRMEIYVSLGIVTLAILALLAVTSIPSVSDSLTWREFHYIQSTLGIVSL
type: DOMAIN
name: Fe3_Rdtase_TM_dom
description: Ferric reductase transmembrane component-like domain