nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MIYQAKTLQVKEVQDGIAELCFNAPQSVNKLDLATLESLDAALDELKKHSEIKGLLMTSDKDSFIVGADITEFLGLFAKPEHELDQWLQFANRIFSKLEDLPFPTLAVMRGHALGGGCECVLATDIRIGDQTTSIGLPETKLGIMPGFGGCVRLPRVIGADSAMEIITQGKACRADEALKIGLLDAVVDSDTLQSSALTTLLLAINEKIDWQARRKQKTSPLSLSRMEAMMSFTMAKGLVAQKAGPHYPAPMTAVVAIEEAAQCSRDDALTIERKHFVRLAKSEEAKSLVGLFLNDQHIKALAKQSAKSATTSTERAAVLGAGIMGGGIAYQSALKGVPVLMKDIAQGSLDLGMSEASKLLNKQLERGRIDGFKMSGILASITPSLHYAGIDSANVIVEAVVENPKVKAAVLSEVETLVDENAILASNTSTIPINLLAKSLKRPENFCGMHFFNPVHRMPLVEVIRGEHTSDDTINRVVAYAAQMGKSPIVVNDCPGFFVNRVLFPYFGGFSMLLRDGADFTKIDKVMERKFGWPMGPAYLLDVVGIDTAHHAQDVMAQGFPERMAKPQRDVIDVLFDAKRYGQKNQLGFYAYTADRKGKPSKNFSEEITPLLAEVCAKPQDFDDQTIIERMMIPMINEVVLCLQEGIIASPQEADMALVYGLGFPPFRGGVCRYLDSLGIAQYLEMSKQYAHLGAMYQAPQLLIDMAAQGAQFYQAQQTGSI

Annotated regions:
phrase: IIERMMIPMINEVVLCLQEGIIASPQEADMALVYGLGFPPFRGGVCRYLDSLGIAQYLEMSKQYAHLGAMYQAPQLLIDMAA
type: DOMAIN
name: 3HC_DH_C
description: 3-hydroxyacyl-CoA dehydrogenase, C-terminal

phrase: GFFVNRVLFPYFGGFSMLLRDGADFTKIDKVMERKFGWPMGPAYLLDVVGIDTAHHAQDVMAQGFPERMAKPQRDVIDVLFDAKRYGQKNQLGFYA
type: DOMAIN
name: 3HC_DH_C
description: 3-hydroxyacyl-CoA dehydrogenase, C-terminal

phrase: DCPGFFVNRVLFPYFGGFSMLLRD
type: CONSERVED_SITE
name: 3-OHacyl-CoA_DH_CS
description: 3-hydroxyacyl-CoA dehydrogenase, conserved site

phrase: AAVLGAGIMGGGIAYQSALKGVPVLMKDIAQGSLDLGMSEASKLLNKQLERGRIDGFKMSGILASITPSLHYAGIDSANVIVEAVVENPKVKAAVLSEVETLVDENAILASNTSTIPINLLAKSLKRPENFCGMHFFNPVHRMPLVEVIRGEHTSDDTINRVVAYAAQMGKSPIVVND
type: DOMAIN
name: 3-OHacyl-CoA_DH_NAD-bd
description: 3-hydroxyacyl-CoA dehydrogenase, NAD binding

phrase: LAVMRGHALGGGCECVLATD
type: CONSERVED_SITE
name: Enoyl-CoA_hyd/isom_CS
description: Enoyl-CoA hydratase/isomerase, conserved site
Protein sequence:
MSANRPAAVVVLAAGEGTRMKSTTPKVLHAICGRSLVGHVVAASRELSPENLVVVVGHAREQVTAHLAEIDADVRTAVQHEQNGTGHAVRMGLEQLTDSTDSGDSGVALDGTVVVVCGDTPLLTGETLGRLAETHASEGNAVTVLTAEVPDATGYGRIVRDGASGAVTAIVEHKDATDAQRAIREINSGVFAFDAQLLIDALGKVRTDNSQGEEYLTDVLGILREAGHHVGACVAGDHREIVGINNRVQLAEARRLLNDRLLTRAMLDGVTVVDPATTWVDATVTFEPDAVVHPGTQLLGATHLAAHAEVGPNSRLTDTTVGEGATASFTVADGAEIGAGASVGPYAYLRPGTRLGAKAKAGTYVEMKNARIGEGTKVPHLSYVGDATIGEYTNIGAASVFVNYDGVNKHHTTIGSHCRTGADNMLVAPVTIGDGAYTAAGSVITKDVPPGSLAVARGQQRNIEGWVARKRPGSAAARAAESARQEGEGEG

Annotated regions:
phrase: VVVLAAGEGTRMKSTTPKVLHAICGRSLVGHVVAASRELSPENLVVVVGHAREQVTAHLAEIDADVRTAVQHEQNGTGHAVRMGLEQLTDSTDSGDSGVALDGTVVVVCGDTPLLTGETLGRLAETHASEGNAVTVLTA
type: DOMAIN
name: MobA-like_NTP_Trfase
description: MobA-like NTP transferase

phrase: HTTIGSHCRTGADNMLVAPVTIGDGAYTAAGSVIT
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: GVTVVDPATTWVDATVTFEPDAVVHPGTQLLGATHLAAHAEVGPNSRLTDTTVGEGATASFTVADGAEIGAGASVGPYAYLRPGTRLGAKAKAGTYVEMKNARIGEGTKVPHLSYVGDATIGEYTNIGAASVFVNYDGVNKHHTTIGSHCRTGADNMLVAPVTIGDGAYTAAGSVITKDVPPGSLAVARGQ
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain
Protein sequence:
MSNFSPREIVSELDRFIIGQKDAKRAVAIALRNRWRRQQLEGQMREEVMPKNILMIGPTGVGKTEISRRLAKLAGAPFVKVEATKFTEVGYVGRDVEQIIRDLVEIAIALVREKRREDVKAKAHLNAEERVLDALVGKTASPVTRDSFRKKLRNGEMDDKEIEIEVSDSGASPNFEIPGMPGANIGVLNISDMLGKAMGGRTKTRKTTVKDSYPILINDESDKLLDQDQIVQEALRVSEDEGIVFIDEIDKIAAREGGSGAGVSREGVQRDLLPLVEGTTVATKYGPVKTDHILFITSGAFHVSKPSDLLPELQGRLPIRVELSALTREDFRRILTETEASLIKQYIALMETEEVKLEFSDDAIDALADIAVDLNATVENIGARRLQTVMEKVLDEISFTAPDKAGATFIIDAAYVKEKIGGLAKNTDLSRFIL

Annotated regions:
phrase: MPKNILMIGPTGVGKTEISRRLAKLAGAPFVKVEATKFTEVGYVGRDVEQIIRDLVEIAIALVREKRREDVKAKAHLNAEERVLDALVGKTASPVTRDSFRKKLRNGEMDDKEIEIEVSDSGASPNFEIPGMPGANIGVLNISDMLGKAMGGRTKTRKTTVKDSYPILINDESDKLLDQDQIVQEALRVSEDEGIVFIDEIDKIAAREGGSGAGVSREGVQRDLLPLVEGTTVATKYGPVKTDHILFITSGAFHVSKPSDLLPELQGRLPIRVE
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: DMLGKAMGGRTKTRKTTVKDSYPILINDESDKLLDQDQIVQEALRVSEDEGIVFIDEIDKIAAREGGSGAGVSREGVQRDLLPLVEGTTVATKYGPVKTDHILFITSGAFHVSKPSDLLPELQGRLPI
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: LTREDFRRILTETEASLIKQYIALMETEEVKLEFSDDAIDALADIAVDLNATVENIGARRLQTVMEKVLDEISFTAPDKAGATFIIDAAYVKEK
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal

phrase: ILMIGPTGVGKTEISRRLAKLAGAPFVKVEATKFTEVGYVGRDVEQIIR
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core
Protein sequence:
MSTAALVEGKIVQCIGAVIDVEFPRDSMPKIYDALILDGSELTLEVQQQLGDGVVRTICLGASDGLRRGLTVKNTGNPISVPVGKPTLGRIMDVLGRPIDEAGPIESETKRSIHQKAPAFDELSPSTELLETGIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERITSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDSTSRQIDPNVIGEEHYSITRRVQQTLQRYKELRDIIAILGMDELSPEDKLSVARARKIQRFLSQPFHVAEVFTGSPGKYVPLKETIRGFKMIVDGECDHLPEQAFYMVGTIDEAFEKAKKIQ

Annotated regions:
phrase: PAVDPLDST
type: ACTIVE_SITE
name: ATPase_a/bsu_AS
description: ATPase, alpha/beta subunit, nucleotide-binding domain, active site

phrase: QIDPNVIGEEHYSITRRVQQTLQRYKELRDIIAILGMDELSPEDKLSVARARKIQRFLSQPFHVAEVFTGSPGKYVPLKETIRGFKMIVDGECD
type: DOMAIN
name: ATP-synt_VA_C
description: ATP synthase A/B type, C-terminal domain

phrase: GIKVIDLICPFAKGGKVGLFGGAGVGKTVNMMELINNIAKEHGGYSVFAGVGERTREGNDFYHEMKDSNVLDKVALVYGQMNEPPGNRLRVALTGLTMAEFFRDEGLDVLFFVDNIYRFTLAGTEVSALLGRMPSAVGYQPTLAEEMGKLQERITSTKKGSITSVQAVYVPADDLTDPSPATTFGHLDATVVLSRDIASLGIYPAVDPLDST
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_nucl-bd
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain

phrase: IVQCIGAVIDVEFPRDSMPKIYDALILDGSELTLEVQQQLGDGVVRTICLGASDGLRRGLTVKNT
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_N
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain
Protein sequence:
MPYNPLYESLSNQFDPSRIETVLDPMGYTIKRRALPVSLTIAGSDCSGGAGIQADLKTMTSLGVYGMSAITCLVAENAGGVDSVEEMSPAFVESQIDCCIRDIPCHVVKTGMLGSPEIVKAVARSAKKFNFSKLVVDPVMVATSGDSLVTKDIVSVLNEELLPLTYLVTPNIPEAIVLAKNQGLDISNINSVSDMERCAAVIHKLGPKHVLLKGGHMPVNNLGLKSSDDEDLRVVDILYDGNRFYHFSSSYLKKGEVHGTGCTLSSAIASFLAWEHSLTEAVQFGIDYVHGAITHSPPINNCSTNILNHMTRLRIVPFAPGHFIEYILSHPQVVPAWKEYINHKFTNMLAKGTLPLPAFQDYLKQDYLYLVNFARAYSLKGYKENTFPNILEAAQSVIHVIEEKELHVSMCSSYGVSLQDLKSCEESPACTAYSRYILDTGAAQDVAALDFVQAPCLIGYYVIAARLMKEPFRNPQGPYQKWVDNYFCEDYLSAVRRGCRQIEEIVLKLSPERIQELIEIFIRATKFETLFWETPYYEYVTKQNLEDKEFS

Annotated regions:
phrase: HPQVVPAWKEYINHKFTNMLAKGTLPLPAFQDYLKQDYLYLVNFARAYSLKGYKENTFPNILEAAQSVIHVIEEKELHVSMCSSYGVSLQDLKSCEESPACTAYSRYILDTGAAQDVAALDFVQAPCLIGYYVIAARLMKEPFRNPQGPYQKWVDNYFCEDYLSAVRRGCRQIEEIVLKLSPERIQELIEIFIRATKFETLFWETPYY
type: DOMAIN
name: Thiaminase-2/PQQC
description: Thiaminase-2/PQQC

phrase: DCSGGAGIQADLKTMTSLGVYGMSAITCLVAENAGGVDSVEEMSPAFVESQIDCCIRDIPCHVVKTGMLGSPEIVKAVARSAKKFNFSKLVVDPVMVATSGDSLVTKDIVSVLNEELLPLTYLVTPNIPEAIVLAKNQGLDISNINSVSDMERCAAVIHKLGPKHVLLKGGHMPVNNLGLKSSDDEDLRVVDILYDGNRFYHFSSSYLKKGEVHGTGCTLSSAIASFLAWEHSLTEAVQFGIDYVHGAITHSPPIN
type: DOMAIN
name: PM/HMP-P_kinase-1
description: Pyridoxamine kinase/Phosphomethylpyrimidine kinase

phrase: LTIAGSDCSGGAGIQADLKTMTSLGVYGMSAITCLVAENAGGVDSVEEMSPAFVESQIDCCIRDIPCHVVKTGMLGSPEIVKAVARSAKKFNFSKLVVDPVMVATSGDSLVTKDIVSVLNEELLPLTYLVTPNIPEAIVLAKNQGLDISNINSVSDMERCAAVIHKLGPKHVLLKGGHMPVNNLGLKSSDDEDLRVVDILYDGNRFYHFSSSYLKKGEVHGTGCTLSSAIASFLAWEHSLTEAVQFGIDYVHGAITHSP
type: DOMAIN
name: HMP/HMP-P_kinase_dom
description: Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase domain

phrase: LTIAGSDCSGGAGIQADLKTMTSLGVYGMSAITCLVAENAGGVDSVEEMSPAFVESQIDCCIRDIPCHVVKTGMLGSPEIVKAVARSAKKFNFSKLVVDPVMVATSGDSLVTKDIVSVLNEELLPLTYLVTPNIPEAIVLAKNQGLDISNINSVSDMERCAAVIHKLGPKHVLLKGGHMPVNNLGLKSSDDEDLRVVDILYDGNRFYHFSSSYLKKGEVHGTGCTLSSAIASFLAWEHSLTEAVQFGIDYVHGAITH
type: DOMAIN
name: HMP/HMP-P_kinase_dom
description: Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase domain
Protein sequence:
MIPSYVPPKYKVEVDPNRCMLCERCTIECSWGVYRREGDRIISYSNRCGACHRCVVMCPRDAITIKENAISWRSHPLWDVDARVDIYNQAKTGCILLSGMGNAKEHPIYFDKIVLDACQVTNPSIDPLREPMELRTYIGKKPKQLEFEFVEEEIDGKKIKKAKLKTKIAPNLKLDTPIMIAHMSYGALSLNAHLSFAKAVKECGTFMGTGEGGLPKALYPYADHIITQVASGRFGVNEEYLMKGSAIEIKIGQGAKPGIGGHLPGEKVTAEISATRMIPEGSDAISPAPHHDIYSIEDLAQLVRSLKEATRWKKPVFVKIAAVHNAPAIAVGIATSDADAVVIDGYKGGTGAAPKVFRDHVGIPIEMAIAAVDQRLREEGLRNEISIIASGGIRCSADVFKAIALGADAVYIGTAAMVALGCRVCGRCYTGLCAWGIATQRPELVKRLDPEVGARRVANLIKAWTHEIKELLGAAGINSIESLRGNRDRLRGVGLNEKELEVLGIKAAGE

Annotated regions:
phrase: CGACHRCVVMC
type: CONSERVED_SITE
name: 4Fe4S_Fe_S_CS
description: 4Fe-4S ferredoxin, iron-sulphur binding, conserved site

phrase: EHPIYFDKIVLDACQVTNPSIDPLREPMELRTYIGKKPKQLEFEFVEEEIDGKKIKKAKLKTKIAPNLKLDTPIMIAHMSYGALSLNAHLSFAKAVKECGTFMGTGEGGLPKALYPYADHIITQVASGRFGVNEEYLMKGSAIEIKIGQGAKPGIGGHLPGEKVTAEISATRMIPEGSDAISPAPHHDIYSIEDLAQLVRSLKEATRWKKPVFVKIAAVHNAPAIAVGIATSDADAVVIDGYKGGTGAAPKVFRDHVGIPIEMAIAAVDQRLREEGLRNEISIIASGGIRCSADVFKAIALGADAVYIGTAAMVALGCRVCGRCYTGLCAWGIATQRPELVKRLDPEVGARRVANLIKAWTHEIKELLGAAGI
type: DOMAIN
name: Glu_synthdom
description: Glutamate synthase domain

phrase: MGNAKEHPIYFDKIVLDACQVTNPSIDPLREPMELRTYIGKKPKQLEFEFVEEEIDGKKIKKAKLKTKIAPNLKLDTPIMIAHMSYGALSLNAHLSFAKAVKECGTFMGTGEGGLPKALYPYADHIITQVASGRFGVNEEYLMKGSAIEIKIGQGAKPGIGGHLPGEKVTAEISATRMIPEGSDAISPAPHHDIYSIEDLAQLVRSLKEATRWKKPVFVKIAAVHNAPAIAVGIATSDADAVVIDGYKGGTGAAPKVFRDHVGIPIEMAIAAVDQRLREEGLRNEISIIASGGIRCSADVFKAIALGADAVYIGTAAMVALGCRVCGRCYTGLCAWGIATQRPELVKRLDPEVGARRVANLIKAWTHEIKELLGAAGINSIESLRGNRDRLR
type: DOMAIN
name: Glu_synthdom
description: Glutamate synthase domain

phrase: GDRIISYSNRCGACHRCVVMCPRDAITIKE
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: YKVEVDPNRCMLCERCTIECSWGVYRR
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain
Protein sequence:
MNPLIQEITKKQLRDDIPDFRPGDNVRVHAKIVEGERERIQLFEGVVIKRHGVGISATYTVRKISNGVGVERTFPLHSPRVEKIEVTRHGQVRRAKLYYLRALRGKAARIREKRR

Annotated regions:
phrase: VTRHGQVRRAKLYYL
type: CONSERVED_SITE
name: Ribosomal_bL19_CS
description: Large ribosomal subunit protein bL19, conserved site
Protein sequence:
MSAAQIFNTVHVNGSSPYDVHIGSGLNELIVQRAAESGAEQVAILHQPSMDDIASELDAALVAAGLKVLHLNVPDAENGKSLEVAGQCWDELGGAAFGRRDIVIGLGGGAATDLAGFVAAAWMRGVRVIQVPTTLLAMVDAAVGGKTGINTAAGKNLVGAFHEPDAVFIDTERLATLPDAEIIAGSAEIIKTGFIADPEILRLYETDPAACLKKEVEGSHLPELIWRSVTVKGSVVGQDLKESSLREILNYGHTFAHAVELRENFRWRHGNAVAVGMMFIANLSHKLGLIDAPLLERHRSILAAIGLPTSYEGGAFDELYDGMTRDKKNRDGNIRFVALTAVGEVTRIEGPSKQDLQSAYEAISH

Annotated regions:
phrase: LNVPDAENGKSLEVAGQCWDELGGAAFGRRDIVIGLGGGAATDLAGFVAAAWMRGVRVIQVPTTLLAMVDAAVGGKTGINTAAGKNLVGAFHEPDAVFIDTERLATLPDAEI
type: DOMAIN
name: DHQS/DOIS_N
description: 3-dehydroquinate synthase, N-terminal domain

phrase: GSAEIIKTGFIADPEILRLYETDPAACLKKEVEGSHLPELIWRSVTVKGSVVGQDLKESSLREILNYGHTFAHAVELRENFRWRHGNAVAVGMMFIANLSHKLGLIDAPLLERHRSILAAIGLPTSYEGGAFDELYDGMTRDKK
type: DOMAIN
name: DHQS_C
description: 3-dehydroquinate synthase, C-terminal domain
Protein sequence:
MIKFLSALILLLVTTAAQAERIRDLTSVQGVRQNSLIGYGLVVGLDGTGDQTTQTPFTTQTLNNMLSQLGITVPTGTNMQLKNVAAVMVTASLPPFGRQGQTIDVVVSSMGNAKSLRGGTLLMTPLKGVDSQVYALAQGNILVGGAGASAGGSSVQVNQLNGGRITNGAVIERELPSQFGVGNTLNLQLNDEDFSMAQQIADTINRVRGYGSATALDARTIQVRVPSGNSSQVRFLADIQNMQVNVTPQDAKVVINSRTGSVVMNREVTLDSCAVAQGNLSVTVNRQANVSQPDTPFGGGQTVVTPQTQIDLRQSGGSLQSVRSSASLNNVVRALNALGATPMDLMSILQSMQSAGCLRAKLEII

Annotated regions:
Protein sequence:
MSVIHPLQNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCGKDYLLLSAGGDDKIFAWDWKTGKNLSTFDYSSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNENSFVVNNEKSNEFDSAIIQSVQGDSNLVTKKEEIYPLYNVSSLRKHGEHYS

Annotated regions:
phrase: LFGHKHFVSSICCGKDYLLLSAGGDDKIFAWDWKTGKNLS
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: CFIVDKWLFGHKHFVSSICCGKDYLLLSAGGDDKIFAW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: GAPPIYSYIRNLRLTSDESRLIACADSDKSLLVF
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: IPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKIS
type: REPEAT
name: WD40_rpt
description: WD40 repeat
Protein sequence:
MEGTEYQVLHGSVDVEVHDVRYDSRHVRPGDLFVCISGFRRDGHDFLQAAWAAGAVAALVERSDLPEGALRGGTVVRVANARQSLAMVACRFYGHPSHKLAMVGVTGTNGKTTTTYLIESVLRRAGHQVGLIGTIGYRCNGVEIEAARTTPESYDLQALLNRMAHLGTDSVVMEVSSHALALHRVDDCEFDVAVFTNLTQDHLDFHGTMEAYRSAKLSLFEGLGVGSTKATEKAAVINMDDPAADLFLGATRVRRYTYSVQRPADLSATDIDMGPDGVRCQLHTPWGTTAIHSPLLGGYNLSNILAAAATGLHLGVDLSAVADGIAALHHVPGRCERVEGGQEFRVIVDYAHTPDALRRVLHMARQCCPGRLIVLFGCGGDRDRGKRQIMGEAALQLADFTVITSDNPRSEDPHQIIEEVEAGAKKVWGQGKGYVTILDRAMAIREALSLAGQGDMVVIAGKGHEAYQILHDRTIPFDDRQVVREALRELGFNREDRV

Annotated regions:
phrase: VGVTGTNGKTTTTYLIESVLRRA
type: CONSERVED_SITE
name: Folylpolyglutamate_synth_CS
description: Folylpolyglutamate synthetase, conserved site

phrase: EVHDVRYDSRHVRPGDLFVCISGFRRDGHDFLQAAWAAGAVAALVERSDLPEGALRGGTVVRVANARQSLAMVACRF
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: VTGTNGKTTTTYLIESVLRRAGHQVGLIGTIGYRCNGVEIEAARTTPESYDLQALLNRMAHLGTDSVVMEVSSHALALHRVDDCEFDVAVFTNLTQDHLDFHGTMEAYRSAKLSLFEGLGVGSTKATEKAAVINMDDPAADLFLGATRVRRYTYSVQRPADLSATDIDMGPDGVRCQLHTPWGTTAIHSPLLGGYNLSNILAAAA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRCERVEGGQEFRVIVDYAHTPDALRRVLHMARQCCPGRLIVLFGCGGDRDRGKRQIMGEAALQLADFTVITSDNPRSEDPHQIIEEVEAGAKKVWGQGKGYVTILDRAMAIREALSLAGQGDMVVIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MKIIITGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRDPETKKRTGFRIITTEGKKKIFSSKFFTSKKLVGSYGVNVQYFEELAIPILERAYREAKKDRRKVIIIDEIGKMELFSKKFRDLVRQIMHDPNVNVVATIPIRDVHPLVKEIRRLPGAVLIELTPENRDVILEDILSLLER

Annotated regions:
phrase: KIIITGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRDPETKKRTGFRIITTEGKKKIFSSKFFTSKKLVGSYGVNVQYFEELAIPILERAYREAKKDRRKVIIIDEIGKMELFSKKFRDLVRQIMHDPNVNVVATIPIRDVHPLVKEIRRLPGAVLIELTP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain
Protein sequence:
MAQHTVYFPDAFLTQMREAMPSTLSFDDFLAACQRPLRRSIRVNTLKISVADFLQLTAPYGWTLTPIPWCEEGFWIERDNEDALPLGSTAEHLSGLFYIQEASSMLPVAALFADDNAPQRVMDVAAAPGSKTTQIAARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKETYPDAVEFLPLGDLFPGANKALTEEGFLHVFPQIYDCEGFFVARLRKTQAIPALPAPKYKVGNFPFSPVKDREAGQIRQAAASVGLNWDGNLRLWQRDKELWLFPVGIEALIGKVRFSRLGIKLAETHNKGYRWQHEAVIALATPDNVNAFELTPQEAEEWYRGRDVYPQAAPVADDVLVTFQHQPIGLAKRIGSRLKNSYPRELVRDGKLFTGNA

Annotated regions:
phrase: AEEWYRGRDVYPQAAPVADDVLVTFQHQPIGLAKRIGSRLKNSYPRELV
type: DOMAIN
name: Nol1_Nop2_Fmu_2
description: rRNA small subunit methyltransferase F, RNA-binding PUA-like domain

phrase: PQRVMDVAAAPGSKTTQIAARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKETYPDAVEFLPLGDLFPGANKALTEEGFLHVFPQIYDCEGFFVARL
type: DOMAIN
name: MeTrfase_RsmB-F_NOP2_cat
description: SAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic core

phrase: FDAILLDAPCS
type: CONSERVED_SITE
name: RsmB/NOL1/NOP2-like_CS
description: RsmB/NOL1/NOP2-like, conserved site

phrase: FSPVKDREAGQIRQAAASVGLNWDGNLRLWQRDKELWLFPVGIEALIGKVRFSRLGIKLAETHNKGYRWQHEAVIA
type: DOMAIN
name: YebU_pre-PUA_dom
description: Ribosomal RNA small subunit methyltransferase F, pre-PUA domain

phrase: FLAACQRPLRRSIRVNTLKISVADFLQLTAPYGWTLTPIPWCEEGFWIERDNEDALPLGSTAEHLSGLFYIQEASSMLPVAALFADDNAPQRVMDVAAAPGSKTTQIAARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKETYPDAVEFLPLGDLFPGANKALTEEGFLHVFPQIYDCEGFFVARLRK
type: DOMAIN
name: MeTrfase_RsmB-F_NOP2_dom
description: SAM-dependent methyltransferase RsmB-F/NOP2-type domain

phrase: IRVNTLKISVADFLQLTAPYGWTLTPIPWCEEGFWIERDNEDALPLGSTAEHLSGLFYIQEASSMLPVAALFADDNAPQRVMDVAAAPGSKTTQIAARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKETYPDAVEFLPLGDLFPGANKALTEEGFLHVFPQIYDCEGFFVARLR
type: DOMAIN
name: Nop2p
description: Nop2p

phrase: FPDAFLTQMREAMPSTLSFDDFLAACQRPLRRSIRVNTLKISVADFLQLTAPYGWTLTPIPWCEEGFWIERDNEDALPLGSTAEHLSGLFYIQE
type: DOMAIN
name: Methyltr_RsmF_N
description: Ribosomal RNA small subunit methyltransferase F, N-terminal
Protein sequence:
MFLDTAKVSVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFKVDEGLRTLMDFRYNRKFKAKSGEKGMTKGMHGRGSEDLIISVPQGTTVRDAETGKVLTDLVEHGQEFVVAKGGRGGRGNIRFATPRNPAPEIAENGEPGEERQLELELKILADVGLVGFPSVGKSTLLSVVSSAKPKIGAYHFTTIVPNLGMVRTKSGESFAMADLPGLIEGASQGVGLGTQFLRHIERTRVILHVIDMSAAEGRDPYEDYVAINKELEAYNLRLMERPQIIVANKMDMPEAKEQLQRFKEQLAAQYDDFEELPMIFPISSLAHQGLDSLLEATAELLAKTDDFLLYDEADFAEDEAYYGFAAEEKAFEISRADDAAWVLSGEKLERLFVMTNLERDESIMKFARQLRGMGVDEALRERGAKDGDIVRIGKFEFEFVD

Annotated regions:
phrase: FEISRADDAAWVLSGEKLERLFVMTNLERDESIMKFARQLRGMGVDEALRERGAKDGDIVRIGKFEFEF
type: DOMAIN
name: OCT_dom
description: GTP-binding protein OBG, C-terminal

phrase: FEISRADDAAWVLSGEKLERLFVMTNLERDESIMKFARQLRGMGVDEALRERGAKDGDIVRIGKFEFE
type: DOMAIN
name: OCT_dom
description: GTP-binding protein OBG, C-terminal

phrase: GFAAEEKAFEISRADDAAWVLSGEKLERLFVMTNLERDESIMKFARQLRGMGVDEALRERGAKDGDIVRIGKFEFEFV
type: DOMAIN
name: OCT_dom
description: GTP-binding protein OBG, C-terminal

phrase: ADVGLVGFPSVGKSTLLSVVSSAKPKIGAYHFTTIVPNLGMVRTKSGESFAMADLPGLIEGASQGVGLGTQFLRHIERTRVILHVIDMSAAEGRDPYEDYVAINKELEAYNLRLMERPQIIVANKMDMPEAKEQLQRFKEQLAAQYDDFEELPMIFPISSLAHQGLDSLLEATAEL
type: DOMAIN
name: G_OBG
description: OBG-type guanine nucleotide-binding (G) domain

phrase: DVGLVGFPSVGKSTLLSVVSSAKPKIGAYHFTTIVPNLGMVRTKSGESFAMADLPGLIEGASQGVGLGTQFLRHIERTRVILHVIDMSAAEGRDPYEDYVAINKELEAYNLRLMERPQIIVANKMDMPEAKEQLQRFKEQLAAQYDDFEELPMIFPISSLAHQGLDSL
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: DVGLVGFPSVGKSTLLSVVSSAKPKIGAYHFTTIVPNLGMVRTKSGESFAMADLPGLIEGASQGVGLGTQFLRHIERTRVILHVIDMSAAEGRDPYEDYVAINKELEAYNLRLMERPQIIVAN
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: DLPGLIEGASQGV
type: CONSERVED_SITE
name: GTP1-OBG_CS
description: GTP1/OBG, conserved site

phrase: MFLDTAKVSVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFKVDEGLRTLMDFRYNRKFKAKSGEKGMTKGMHGRGSEDLIISVPQGTTVRDAETGKVLTDLVEHGQEFVVAKGGRGGRGNIRFATPRNPAPEIAENGEPGEERQLELELKI
type: DOMAIN
name: GTP1_OBG_dom
description: GTP1/OBG domain

phrase: DTAKVSVQAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFKVDEGLRTLMDFRYNRKFKAKSGEKGMTKGMHGRGSEDLIISVPQGTTVRDAETGKVLTDLVEHGQEFVVAKGGRGGRGNIRFATPRNPAPEIAENGEPGEERQLELELK
type: DOMAIN
name: GTP1_OBG_dom
description: GTP1/OBG domain

phrase: VGLVGFPSVGKSTLLSVVSS
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: KPKIGAYHFTTIVPNLGM
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: MADLPGLIEGASQGV
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: GTQFLRHIERTRVILHVI
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: ADVGLVGFPSVGKSTLLSVVSSAKPKIGAYHFTTIVPNLGMVRTKSGESFAMADLPGLIEGASQGVGLGTQFLRHIERTRVILHVIDMSAAEGRDPYEDYVAINKELEAYNLRLMERPQIIVANKMDMPEAKEQLQRFKEQLAAQYDDFEELPMIFPISSLAHQGLDSLLEATAELL
type: DOMAIN
name: G_OBG
description: OBG-type guanine nucleotide-binding (G) domain
Protein sequence:
MGVQKSEVEATSSVSAEKLFKGLCLDIDTLLPRVLPGAIKSSETLEGDGGVGTVKLVHLGDASPFKTMKQKVDAIDKATFTYSYSIIDGDILLGFIESINNHFTAVPNADGGCTVKSTIIFNTKGDAVVPEENIKFANDQNLTIFKAVEAYLIAN

Annotated regions:
phrase: MGVQKSEVEATSSVSAEKLFKGLCLDIDTLLPRVLPGAIKSSETLEGDGGVGTVKLVHLGDASPFKTMKQKVDAIDKATFTYSYSIIDGDILLGFIESINNHFTAVPNADGGCTVKSTIIFNTKGDAVVPEENIKFANDQNLTIFKAVEAYLIA
type: DOMAIN
name: Bet_v_I/MLP
description: Bet v I/Major latex protein

phrase: MGVQKSEVEATSSVSAEKLFKGLCLDIDTLLPRVLPGAIKSSETLEGDGGVGTVKLVHLGDASPFKTMKQKVDAIDKATFTYSYSIIDGDILLGFIESINNHFTAVPNADGGCTVKSTIIFNTKGDAVVPEENIKFANDQNLTIFKAVEAYLI
type: DOMAIN
name: Bet_v_I/MLP
description: Bet v I/Major latex protein
Protein sequence:
METKLPPASTPTSPSSPGLSPVPPADKVDGFSRRSLRRARPRRSHSSSQFRYQSNQQELTPLPLLKDVPASELHDLLSRKLAQCGVMFDFLDCVADLKGKEVKRAALNELVECVGSTRGVLIEPVYPDIIRMISVNIFRTLPPSENPEFDPEEDEPNLEPSWPHLQLVYEFFLRFLESPDFQPSVAKRYVDQKFVLMLLELFDSEDPREREYLKTILHRVYGKFLGLRAYIRKQCNHIFLRFIYEFEHFNGVAELLEILGSIINGFALPLKTEHKQFLVRVLIPLHSVKSLSVFHAQLAYCVVQFLEKDATLTEHVIRGLLKYWPKTCTQKEVMFLGEVEEILDVIEPSQFVKIQEPLFKQVARCVSSPHFQVAERALYFWNNEYILSLIEDNCHTVLPAVFGTLYQVSKEHWNQTIVSLIYNVLKTFMEMNGKLFDELTASYKLEKQQEQQKARERQELWQGLEELRLRRLQGTQGTQGAREAPLQRFVPQVAATGGQS

Annotated regions:
Protein sequence:
MRRKIVVGNWKMNKTVAESTELASAVVAALGSDCSACEAGIAPTYPALDSVGRTIKGSEVLLVAQNCHYEDDGAFTGEVSTGMLNALGCSYVIIGHSERRQYFGETDATVNLRIKKVLAAGMKAILCVGETLEERESGAFEAVVSTQVTGGLQGVVDISDIVIAYEPVWAIGTGRTASSEQAQEVHKIIRNKVAELYGAPAADAVRIQYGGSVKPSNAAELFAMPDIDGGLIGGAALKAEDFAAIVKAAC

Annotated regions:
phrase: AYEPVWAIGT
type: ACTIVE_SITE
name: Triosephosphate_isomerase_AS
description: Triosephosphate isomerase, active site
Protein sequence:
MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACDSQRPSVVFINEDCFIHDASNSQHIKHIINQHPNTLFIVFMAIANVHFDEYLLVRKNLLISSKSIKPESLDDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNVTNGIFVNMR

Annotated regions:
phrase: LSRTESSMLRMWMA
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: GQGTIQISDQMNIKAK
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: TVSSHKGNIKRK
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: SLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYH
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: LNMPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLT
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: LSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVR
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: GQGTIQISDQMNIKAKTVSSHKGNIKR
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: TLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKIKTHNKQVIYHV
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal
Protein sequence:
MLRTVSVGRQYVQRYFGHCLIVNSVRHSSSATVNRLKQPLRRVFDDDSHWRALNHSNYKLNESKGRKFGLRSTSDLETGLFQNSYLKSANGLVEFTQHSFEKAKELVQKIHSIETQDEMKYYIKDLDQLSDVLCRVIDLCEFIRATHPDKKFVQTAQQCHEKMFEIMNILNTDVRLCDLLTQCLRESDVLGLDSEEIRTGKILLEDFEKSGIYMKPEIREKFIQLSQEISVIGQDFINNTEYVRSNYIKISCELMDAHVNKMVCSQMKKDITGEYYKVPTYGYIPHTLLRTCSDEVIRMKIWTEMHSCSDAQIERLTKLISLRVELAKLLGSQNFAQYQLHGKMAKTPENVSGFLESLVHSTRIKAASELKPLAVLKSELTGTQTPHTSEEVLELMKPWDRDYYGSIQALAQRRSSSLDNGESISSSFSLGVVMQGLSDLFEKIYGIKLVPATPKTGETWSPDVRRIDVVDEHDGLIGVMYCDLFEREGKTPNPAHFTVCCSRNMYLNEADTSTIQVGVNSNGQKFQLPVISLVCDFRWVEVNMGDGKHQQMCLLQLNEIETLFHEMGHAMHSMLGRTQLQNVSGTRCATDFVELPSILMEHFARDTRVLSSISSHYKTGKSLDVEVLKNHQLENQFLQNCETFSQIKMSFLDQELHNLDHTTDGSIDVIAIYHRLERRLAVLPDDQSNWCGKFGHLFGYGASYYSYLFDRAIASKIWDHLFEQDPFNRTNGTKFKEGLLQWGGSRDPWYLLSQVLDEPRLAKGDEWGMRYIGDVKTGM

Annotated regions:
phrase: LRTCSDEVIRMKIWTEMHSCSDAQIERLTKLISLRVELAKLLGSQNFAQYQLHGKMAKTPENVSGFLESLVHSTRIKAASELKPLAVLKSELTGTQTPHTSEEVLELMKPWDRDYYGSIQALAQRRSSSLDNGESISSSFSLGVVMQGLSDLFEKIYGIKLVPATPKTGETWSPDVRRIDVVDEHDGLIGVMYCDLFEREGKTPNPAHFTVCCSRNMYLNEADTSTIQVGVNSNGQKFQLPVISLVCDFRWVEVNMGDGKHQQMCLLQLNEIETLFHEMGHAMHSMLGRTQLQNVSGTRCATDFVELPSILMEHFARDTRVLSSISSHYKTGKSLDVEVLKNHQLENQFLQNCETFSQIKMSFLDQELHNLDHTTDGSIDVIAIYHRLERRLAVLPDDQSNWCGKFGHLFGYGASYYSYLFDRAIASKIWDHLFEQDPFNRTNGTKFKEGLLQWGGSRDPWYLLSQVLDEPRLA
type: DOMAIN
name: Pept_M3A_M3B_dom
description: Peptidase M3A/M3B catalytic domain
Protein sequence:
MKGAAFVKKEGLKQKALEIGRVPTHLKLEIEDYGGDDKRAHFCWADPQDENTGIIVELGPDGELESLSRDIEPESGERLSEEKLEDIMRQFVETHHPGALSAFVREENDRAYGDKVRFSYVQMEAGLPLPMSGFMADVSLSGEIVYFRYYGEAGSIIKPKRVADVEEALAFIKKDVEFDLLFEVLHRSVYKNGDDQPHLVYEPEGRAITVPADLVQEEQAVDDDDDYREPESFPLPLFEGIREKADPDSMIGIENGFVKEREADLGDGRIGIVWRNPDDPVYQPADKSMDSWFKGRTHQVLKTIYNKETGKLEGVMSFMEKKGPLTVTLAECEKIALRFLFALFPNADQYFRIRYDEKDEEENAVAGFTFEAHCHGVPLRFGQIRICVSRQTGYITVYMGPDIDPNKLATIDPVPAISVEQAKSIFWQHFKVELGWEREYGDDEEHSYRLVYKPVYPHFIDAHTGEPVFSIW

Annotated regions:
phrase: KEGLKQKALEIGRVPTHLKLEIEDYGGDDKRAHFCWADPQDENTGIIVELGPDGELESLSRDIEPESGERLSEEKLEDIMRQFVETHHPGALSAFVREENDRAYGDKVRFSYVQMEAGLPLPMSGFMADVSLSGEIVYFRYY
type: DOMAIN
name: YcdB/YcdC_rep_domain
description: YcdB/YcdC, repeated domain

phrase: EKADPDSMIGIENGFVKEREADLGDGRIGIVWRNPDDPVYQPADKSMDSWFKGRTHQVLKTIYNKETGKLEGVMSFMEKKGPLTVTLAECEKIALRFLFALFPNADQYFRIRYDEKDEEENAVAGFTFEAHCHGVPLRFGQIRICVSRQTGYITVYMG
type: DOMAIN
name: YcdB/YcdC_rep_domain
description: YcdB/YcdC, repeated domain