nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MRQYLDLLQHVLDNGADRSDRTGTGTRSVFGYQMRFDLARGFPVTTTKKLHLKSIIHELLWFLAGDTNIKYLTDHGVTIWDEWADENGDLGPVYGRQWRSWPDGHGGSIDQIAGLLKEIRRNPQSRRLIVSAWNPAEVEAMALPPCHCLFQFYVSEGRLSCQLYQRSADIFLGVPFNIASYALLTLMVAQVTGLKPGDFVHTLGDAHLYSNHFEQAREQLQRTPRALPTMWINPEVKDLFAFRFEDFRLENYVADASIQAPIAV

Annotated regions:
phrase: RQYLDLLQHVLDNGADRSDRTGTGTRSVFGYQMRFDLARGFPVTTTKKLHLKSIIHELLWFLAGDTNIKYLTDHGVTIWDEWADENGDLGPVYGRQWRSWPDGHGGSIDQIAGLLKEIRRNPQSRRLIVSAWNPAEVEAMALPPCHCLFQFYVSEGRLSCQLYQRSADIFLGVPFNIASYALLTLMVAQVTGLKPGDFVHTLGDAHLYSNHFEQAREQLQRTPRALPTMWINPEVKDLFAFRFEDFRLENYVADASIQAPIA
type: DOMAIN
name: Thymidate_synth/dCMP_Mease_dom
description: Thymidylate synthase/dCMP hydroxymethylase domain

phrase: RRLIVSAWNPAEVEAMALPPCHCLFQFY
type: ACTIVE_SITE
name: Thymidylate_synthase_AS
description: Thymidylate synthase, active site

phrase: QYLDLLQHVLDNGADRSDRTGTGTRSVFGYQMRFDLARGFPVTTTKKLHLKSIIHELLWFLAGDTNIKYLTDHGVTIWDEWADENGDLGPVYGRQWRSWPDGHGGSIDQIAGLLKEIRRNPQSRRLIVSAWNPAEVEAMALPPCHCLFQFYVSEGRLSCQLYQRSADIFLGVPFNIASYALLTLMVAQVTGLKPGDFVHTLGDAHLYSNHFEQA
type: DOMAIN
name: Thymidate_synth/dCMP_Mease_dom
description: Thymidylate synthase/dCMP hydroxymethylase domain
Protein sequence:
MIKQQTIKESVSCSGIGLHTGVDSTITFKPSDENTGIRFIRNDVDGSPEIQADIDHVVDISRGTTIAQNGTRIHTVEHVLAALVGLEIDNILIELTNKEPPVMDGSSKDFVDVLQKANIVEQHQPREYLEIDKAVTYSDPAKKTDISVLPSDRYRLTCIIDYQYPWLGTQYLTIHSINDFPTEIAPARTFSFLSEVEDLREAGLVQGGRLDNAIVIMDKEVDIDEINRLRSLFHIEEDIEIGTNGILHGVKLRFENEPVRHKALDVIGDLALLGMPIKGHVIAARPGHAANVEIVKNIKKEYEKKILKKKYQAKVSSEFLFDINAISKILPHRYPFLLIDRILDMKPGESLSAIKNVSVSEPFFQGHFPNQPVMPGVLIIEAMAQAGSFMLLHTVPDPEKKLMYFTGIEKSKFRRQVLPGDQILFKIDLLKLRLGTCKLHGIAYVDDNVVAEATFITTIGDRKE

Annotated regions:
Protein sequence:
MSELVRKLSGTAPNPAFPRGAVDTQMHMYLPGYPALPGGPGLPPGALPGPEDYRRLMQWLGIDRVIITQGNAHQRDNGNTLACVAEMGEAAHAVVIIDATTTEKDMEKLTAAGTVGARIMDLPGGAVNLSELDAVDERAHAADWMVAVQFDGNGLLDHLPRLQKIRSRWVFDHHGKFFKGIRTDGPEMAALLKLIDRGNLWFKFAGVYESSRKSWPYADVAAFSRVIAAHAPERIVWGTNWPHNSVRETAAYPDDARLAELTLGWLPDEAARHRALVENPEALFKLSPVKAT

Annotated regions:
phrase: VDTQMHMYLPGYPALPGGPGLPPGALPGPEDYRRLMQWLGIDRVIITQGNAHQRDNGNTLACVAEMGEAAHAVVIIDATTTEKDMEKLTAAGTVGARIMDLPGGAVNLSELDAVDERAHAADWMVAVQFDGNGLLDHLPRLQKIRSRWVFDHHGKFFKGIRTDGPEMAALLKLIDRGNLWFKFAGVYESSRKSWPYADVAAFSRVIAAHAPERIVWGTNWPHNSVRETAAYPDDARLAELTLGWLPDEAARHRALVENPEALFK
type: DOMAIN
name: Amidohydro-rel
description: Amidohydrolase-related
Protein sequence:
MGQDHSVEARPPPTHEEVVRHLAGKFADKCYTPLEIYSLKDNFKSLADTVQDVKYLKEDTVARFLEIPDALRVTPVLFQSVSFLAAFPFLRDAPAVLGLEQLVIAITILTGRWKRVLKSPADRTKLLFKSLAVYDRKLSCATLTPVASPMAAEAKGASAGFAVDEAGDDDEAEDDGDDDLVLAAFESLDCVDAFRHGDAPPKIQGAMIPADNFVRLIMLLLLVAPLDPQERLSQYSDRLVGTELEDLHATAQCVVQAFLDVEEVPGLTWSRFRKILPVCCPFMFDAGFNALFSHFLFSKNIDFNKRKPTGSEEDRGEQPKLPQKATPSQSTLPQPLLPQAGSILNANILSQLSFFIPGDSLFRCLRLLYSGDEDGFSMGSFESKVFNWRAPTLLLVRGRRLDDHPDGTRESAFAASIPPRRFPNGGGGGTTENSDEIITFGAFIAQPWRHTHRECFGDDSSVLFQLGPVHDVFRASTMNRDYAGFVKPTGSGSSNHHGGIMFGCPAPSPSKASSATGALVALGSVSLFLDSSFEFGVFTHDHTSRGGAYAGSTSRPRNFQERFAVNCLEVWGCGGDEESKRQAERWAWEAREAEARRKINLGTGDLEADRALLEMAGLVGQNRSGGSMI

Annotated regions:
phrase: GSILNANILSQLSFFIPGDSLFRCLRLLYSGDEDGFSMGSFESKVFNWRAPTLLLVRGRRLDDHPDGTRESAFAASIPPRRFPNGGGGGTTENSDEIITFGAFIAQPWRHTHRECFGDDSSVLFQLGPVHDVFRASTMNRDYAGFVKPTGSGSSNHHGGIMFGCPAPSPSKASSATGALVALGSVSLFLDSSFEFGVFTHDHTSRGGAYAGSTSRPRNFQERFAVNCLEVWGC
type: DOMAIN
name: TLDc_dom
description: TLDc domain

phrase: LYSGDEDGFSMGSFESKVFNWRAPTLLLVRGRRLDDHPDGTRESAFAASIPPRRFPNGGGGGTTENSDEIITFGAFIAQPWRHTHRECFGDDSSVLFQLGPVHDVFRASTMNRDYAGFVKPTGSGSSNHHGGIMFGCPAPSPSKASSATGALVALGSVSLFLDSSFEFGVFTHDHTSRGGAYAGSTSRPRNFQERFAVNCLEVWGC
type: DOMAIN
name: TLDc_dom
description: TLDc domain

phrase: SILNANILSQLSFFIPGDSLFRCLRLLYSGDEDGFSMGSFESKVFNWRAPTLLLVRGRRLDDHPDGTRESAFAASIPPRRFPNGGGGGTTENSDEIITFGAFIAQPWRHTHRECFGDDSSVLFQLGPVHDVFRASTMNRDYAGFVKPTGSGSSNHHGGIMFGCPAPSPSKASSATGALVALGSVSLFLDSSFEFGVFTHDHTSRGGAYAGSTSRPRNFQERFAVNCLEVWGC
type: DOMAIN
name: TLDc_dom
description: TLDc domain
Protein sequence:
MMFPVRCFTCGAPIGHLWEEFKKRVEAGEDPGKVLDDLGVKRYCCRRMFLSHIEISYEILNFPKVS

Annotated regions:
phrase: MFPVRCFTC
type: BINDING_SITE
name: RNA_pol_suN_Zn-BS
description: RNA polymerases, subunit N, zinc binding site
Protein sequence:
MSQDGTWSDESDWELDDSDLAEFGPVVAVVGRPNVGKSTLVNRILGRREAVVQDVPGVTRDRVSYDAMWTGRRFVVQDTGGWEPDAKGLKRLVAEQASVAMRTADAVILVVDVGVGATDADEAAARILLRSGKLVFLAANKVDGEKGESDASALWSLGLGEPHAISAMHGRGVADLLDKVLAALPNVAESTSLDGGLRRVALVGKPNVGKSSLLNKLAGDQRSVVHEAAGTTVDPVDSLIEMGGRVWRFVDTAGLRRKVGQASGHEFYASVRTHGAIDSAEVVIMLIDASEPLTGQDQRVLSMVIDAGRALVLAFNKWDLVDEDRCDLLEREIDRELVQVRWAQRVNISAKTGRAVQKLVPAMENSLASWDTRIATGPLNIWIKAVVAATPPPVRGGKQPRILFATQATARPPTFVLFTTGFLEACYRRFLERRLRETFGFEGSPIRINVRVREKRGLKRR

Annotated regions:
phrase: RRVALVGKPNVGKSSLLNKLAGDQRSVVHEAAGTTVDPVDSLIEMGGRVWRFVDTAGLRRKVGQASGHEFYASVRTHGAIDSAEVVIMLIDASEPLTGQDQRVLSMVIDAGRALVLAFNKWDLVDEDRCDLLEREIDRELVQVRWAQRVNISAKTGRAVQKLVPAMENSLASW
type: DOMAIN
name: G_ENGA
description: EngA-type guanine nucleotide-binding (G) domain

phrase: VALVGKPNVGKSSLLNKLAG
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: FVDTAGLRRKVGQAS
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: PVVAVVGRPNVGKSTLVNRILGRREAVVQDVPGVTRDRVSYDAMWTGRRFVVQDTGGWEPDAKGLKRLVAEQASVAMRTADAVILVVDVGVGATDADEAAARILLRSGKLVFLAANKVDGEKGESDASALWSLGLGEPHAISAMHGRGVADLLDKVLAALPNV
type: DOMAIN
name: G_ENGA
description: EngA-type guanine nucleotide-binding (G) domain

phrase: RIATGPLNIWIKAVVAATPPPVRGGKQPRILFATQATARPPTFVLFTTGFLEACYRRFLERRLRETFGFEGSPIRINV
type: DOMAIN
name: KH_dom-like
description: GTPase Der, C-terminal KH-domain-like

phrase: VAVVGRPNVGKSTLVNRILGRREAVVQDVPGVTRDRVSYDAMWTGRRFVVQDTGGWEPDAKGLKRLVAEQASVAMRTADAVILVVDVGVGATDADEAAARILLRSGKLVFLAAN
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: RVALVGKPNVGKSSLLNKLAGDQRSVVHEAAGTTVDPVDSLIEMGGRVWRFVDTAGLRRKVGQASGHEFYASVRTHGAIDSAEVVIMLIDASEPLTGQDQRVLSMVIDAGRALVLAFN
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: RRVALVGKPNVGKSSLLNKLAGDQRSVVHEAAGTTVDPVDSLIEMGGRVWRFVDTAGLRRKVGQASGHEFYASVRTHGAIDSAEVVIMLIDASEPLTGQDQRVLSMVIDAGRALVLAFNKWDLVDEDRCDLLEREIDRELVQVRWAQRVNISAKTGRAVQKLVPAM
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: VVAVVGRPNVGKSTLVNRILGRREAVVQDVPGVTRDRVSYDAMWTGRRFVVQDTGGWEPDAKGLKRLVAEQASVAMRTADAVILVVDVGVGATDADEAAARILLRSGKLVFLAANKVDGEKGESDASALWSLGLGEPHAISAMHGRGVADLLDK
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain
Protein sequence:
MMDMARAHVFISGRVQGVNFRASARNYAREVGVSGWVRNLEDGRVEAVFEGERSAVQKMVSWCYSGPSHARVEAVDVRWEKPTGEERGFSIIW

Annotated regions:
phrase: GWVRNLEDGRVEAVFE
type: CONSERVED_SITE
name: Acylphosphatase_CS
description: Acylphosphatase, conserved site

phrase: ISGRVQGVNF
type: CONSERVED_SITE
name: Acylphosphatase_CS
description: Acylphosphatase, conserved site

phrase: HVFISGRVQGVNFRASARNYAREVGVSGWVRNLEDGRVEAVFEGERSAVQKMVSWCYSGPSHARVEAVDVRWEKPTGEERGFS
type: DOMAIN
name: Acylphosphatase-like_dom
description: Acylphosphatase-like domain

phrase: RAHVFISGRVQGVNFRASARNYAREVGVSGWVRNLEDGRVEAVFEGERSAVQKMVSWCYSGPSHARVEAVDVRWEKPTGEERGFSII
type: DOMAIN
name: Acylphosphatase-like_dom
description: Acylphosphatase-like domain
Protein sequence:
MKLAIVGATGLVGQELLKVIDERNIEFDELYLVASAKSVGQKMKFKGKEYTVKSIQEGCDLAPDVAIFSAGGGTSLEWAPKYAEKGTIVIDNSSALRMDPTKKLIVPEINGHELKIDDRIIANPNCSTIQMVMALAPLHVKYKIKRIVVSTYQSVTGTGKDAVQQMMEERKGVANPIKVYPHPIDMNALPHIDSFLDNGYTKEEMKMVNETRKILGDNSIGVTSTTVRIPAIGGHSEAVNVEFYKEFDLKEVREILENTPGVVVQDDVKNNVYPMPILSHGKDEVFVGRLRRDESQPHTLNMWIVSDNLRKGAATNAVQIAEFLMEKSLVVG

Annotated regions:
phrase: LAPLHVKYKIKRIVVSTYQSVTGTGKDAVQQMMEERKGVANPIKVYPHPIDMNALPHIDSFLDNGYTKEEMKMVNETRKILGDNSIGVTSTTVRIPAIGGHSEAVNVEFYKEFDLKEVREILENTPGVVVQDDVKNNVYPMPILSHGKDEVFVGRLRRDESQPHTLNMWIVSDNLR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: KLAIVGATGLVGQELLKVIDERNIEFDELYLVASAKSVGQKMKFKGKEYTVKSIQEGCDLAPDVAIFSAGGGTSLEWAPKYAEKGTIVIDNSSALRMDPTKKLIVPEINGHELKI
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: KLAIVGATGLVGQELLKVIDERNIEFDELYLVASAKSVGQKMKFKGKEYTVKSIQEGCDLAPDVAIFSAGGGTSLEWAPKYAEKGTIVIDNSSALRMDPTKKLIVPEINGHEL
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
GSNRKKNLSFEDNAREDFDYPDMAKEAGQKALADARVPYSAIEQACVGYVYGDSTCGQRAIYHSLGLTGIPIINVNNNCSTGSTALFMARQLIQGGLAECVLALGFEKMERGSLSSKYMDRTNPMDKHMEVMINRYGMSAAPAAPQMFGNAGREHMEKYGTKPEHFAKIAWKNHKHSTNNPYSQFQEEYSLQQVMKSRKVFEFLTLLQCCPTSDGAGAAVLASEAFVRRHGLEGQAVEILAQEMVTDLSTTFEENSCMKMVGYDMSRLAAKKCFEASGLKPRNVDVVELHDCFSANELITYEALGLCPEGQAGELIDRGDNTYGGKFVVNPSGGLISKGHPLGATGLAQCAELCWQLRGQADRRQVPGAKVALQHNIGLGGAVVVTLYRMGFPEEARSLVGAIPTSSVSSLEGFKAYPVFQEINRKLQEDGEEYVKKIGAVFAFNVKNGPDGKEGLLVVDVKNGKGCISTDPDCTVAIDDEDLLALMTGKLNPQTAFYQGKLKLSGNLSMALKLQNLQMSAGKAKL

Annotated regions:
phrase: NPSGGLISKGHPLGAT
type: CONSERVED_SITE
name: Thiolase_CS
description: Thiolase, conserved site

phrase: FQEINRKLQEDGEEYVKKIGAVFAFNVKNGPDGKEGLLVVDVKNGKGCISTDPDCTVAIDDEDLLALMTGKLNPQTAFYQGKLKLSGNLSMALKLQN
type: DOMAIN
name: SCP2_sterol-bd_dom
description: SCP2 sterol-binding domain

phrase: SCMKMVGYDMSRLAAKKCFEASGLKPRNVDVVELHDCFSANELITYEALGLCPEGQAGELIDRGDNTYGGKFVVNPSGGLISKGHPLGATGLAQCAELCWQLRGQADRRQVPGAKVALQHNIG
type: DOMAIN
name: Thiolase_C_2
description: Thiolase, C-terminal domain 2

phrase: VNNNCSTGSTALFMARQL
type: ACTIVE_SITE
name: Thiolase_acyl_enz_int_AS
description: Thiolase, acyl-enzyme intermediate active site

phrase: NAREDFDYPDMAKEAGQKALADARVPYSAIEQACVGYVYGDSTCGQRAIYHSLGLTGIPIINVNNNCSTGSTALFMARQLIQGGLAECVLALGFEKMERGSLSSKYMDRTNPMDKHMEVMINRYGMSAAPAAPQMFGNAGREHMEKYGTKPEHFAKIAWKNHKHSTNNPYSQFQEEYSLQQVMKSRKVFEFLTLLQCCPTSDGAGAAVLAS
type: DOMAIN
name: Thiolase_N
description: Thiolase, N-terminal
Protein sequence:
MEDINLTIFSDDALPHAVVVDDYVIAIKRNPNGTFLEPHQMYDRYTQEFLQGKARDVLRQNGRDGYKLIIPEALSTGIIRYENKTKGAQSEVELENQLRSSIRHQRVKPRMDEAHRKLQIELRGGQILLHPRIAESIEFSIISKENATCSHTPVNCAYEVLLSGGINVGTGTCYDLSSRLKLRVIGDVDRHRRSMQNVLGRVIHTGDPKIINRVNQIGSQQFIDRAIGPDKFELKREIFDRLKALDVDVRKVIREEEASAELDEMGRRWMRDQNVNIVNDIIQSLVKKGSRSEKLAHRNEQGMQARFRRTIATNLRDQRQGKEVLNIRGTRGQPEEKKFAAVLLMTGCDIVERAIWSNEETAILRGLYAYAHDKLGCVYRAMKKDFVWSIRPTYTDRCAGVCDRKRTIMVREDYFDLQREENDSVYKWIITEWDKNDVIISAKNGYLYSKYSGEDEDDILVHEIDDRLYTAMIDRILINGWIEKEGLSQIIKEEVRLESFDFTKDAYVDEAGFLVLPEYYDRVIASNIYDCKFKISRVSITSSSNDDPWDKKTADSIIDEQCLWKIPLPNIIDVRPCFRGDLLTSNSQEYSKRFSGIIDELKKDKEIYDDFIPVQEGVRPCVQGHVCRYAFYRQKLTIFTILKRYYPIERILELTDEEDYEYNLYLDKECYKKESLILNLRSIFSLICFLIDFGYEGREITRGEDEYLKIFNEINYGGHARKEAINKYFPQFYQRLMRVRTSENIEDLLPLAFYQALLLSDPCTDNSE

Annotated regions:
Protein sequence:
MKIFAYGIRDDEKPSLEEWKAANPEIEVDYTQELLTPETAKLAEGSDSAVVYQQLDYTRETLTALANVGVTNLSLRNVGTDNIDFDAAREFNFNISNVPVYSPNAIAEHSMLQLSRLLRRTKALDAKIAKRDLRWAPTTGREMRMQTVGVIGTGHIGRVAINILKGFGAKVIAYDKYPNAELQAEGLYVDTLDELYAQADAISLYVPGVPENHHLINADAIAKMKDGVVIMNAARGNLMDIDAIIDGLNSGKISDFGMDVYENEVACSMKIGLVKNSPDAKIADLIARENVMITPHTAFYTTKAVLEMVHQSFDAAVAFAKGEKPAIAVEY

Annotated regions:
phrase: MKDGVVIMNAARGNLM
type: CONSERVED_SITE
name: D-isomer_DH_CS
description: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site

phrase: SRLLRRTKALDAKIAKRDLRWAPTTGREMRMQTVGVIGTGHIGRVAINILKGFGAKVIAYDKYPNAELQAEGLYVDTLDELYAQADAISLYVPGVPENHHLINADAIAKMKDGVVIMNAARGNLMDIDAIIDGLNSGKISDFGMDVYENEVACSMKIGLVKNSPDAKIADLIARENVMITPHT
type: DOMAIN
name: D-isomer_DH_NAD-bd
description: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain

phrase: IRDDEKPSLEEWKAANPEIEVDYTQELLTPETAKLAEGSDSAVVYQQLDYTRETLTALANVGVTNLSLRNVGTDNIDFDAAREFNFNISNVPVYSPNAIAEHSMLQLSRLLRRTKALDAKIAKRDLRWAPTTGREMRMQTVGVIGTGHIGRVAINILKGFGAKVIAYDKYPNAELQAEGLYVDTLDELYAQADAISLYVPGVPENHHLINADAIAKMKDGVVIMNAARGNLMDIDAIIDGLNSGKISDFGMDVYENEVACSMKIGLVKNSPDAKIADLIARENVMITPHTAFYTTKAVLEMVHQSFDAAVAFAKGEKPAIA
type: DOMAIN
name: D-isomer_2_OHA_DH_cat_dom
description: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain

phrase: VGVIGTGHIGRVAINILKGFGAKVIAY
type: CONSERVED_SITE
name: D-isomer_DH_CS1
description: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1
Protein sequence:
MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIVISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDVSDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIQEAVEEGKIAETRFENYHRILESMAQVKTRKNFSDTDD

Annotated regions:
phrase: TSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDVSDNSGLGQHTTTAARLYHFPHGGDVIDSPGVRE
type: DOMAIN
name: G_CP_dom
description: Circularly permuted (CP)-type guanine nucleotide-binding (G) domain

phrase: VHERTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDVSDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGL
type: DOMAIN
name: RsgA_GTPase_dom
description: RsgA GTPase domain

phrase: ANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLNKIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGVGKSSLLNALLGLQKEILTNDVSDNSGLGQHTTTAARLYHFPHGGDVIDSPGV
type: DOMAIN
name: RsgA_GTPase_dom
description: RsgA GTPase domain
Protein sequence:
MIDPNLLRNNLAEVAEKLKVKRNFMLDTEKLTALEDQRKNLQVTTENLQAERNARSKAIGAAKARGEDIAPLLAEMDDMGNQLTEAKAQLDAVLAEINQIALSIPNLPADEVPLGKDDTENKEILRWGTPRTFDFEVKDHITLGEEANGLDFAAGAKLAGARFAVMKGQIAKMHRALAQFMLDLHTEQHGYLETYVPYLVNHATLYGTGQLPKFGEDLFHTLALEGEQPYALIPTAEVPVTNLVRDVIIDEAELPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVDPDKSMEALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSCKTYDLEVWVPAQNTYREISSCSNMWDFQARRMQARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSITVPEELRPYMGGLDVIGK

Annotated regions:
phrase: ENKEILRWGTPRTFDFEVKDHITLGEEANGLDFAAGAKLAGARFAVMKGQIAKMHRALAQFMLDLHTEQHGYLETYVPYLVNHATLYGTGQLPKFGEDLFHTLALEGEQPYALIPTAEVPVTNLVRDVIIDEAELPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVDPDKSMEALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSCKTYDLEVWVPAQNTYREISSCSNMWDFQARRMQARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSITVPEELRPY
type: DOMAIN
name: SerRS_core
description: Serine-tRNA ligase catalytic core domain

phrase: EGEQPYALIPTAEVPVTNLVRDVIIDEAELPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVDPDKSMEALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSCKTYDLEVWVPAQNTYREISSCSNMWDFQARRMQARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLEN
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: KMHRALAQFMLDLHTEQHGYLETYVPYLVNHATLYGTGQLPKFGEDLFHTLALEGEQPYALIPTAEVPVTNLVRDVIIDEAELPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVDPDKSMEALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSCKTYDLEVWVPAQNTYREISSCSNMWDFQARRMQARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSITV
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: MIDPNLLRNNLAEVAEKLKVKRNFMLDTEKLTALEDQRKNLQVTTENLQAERNARSKAIGAAKARGEDIAPLLAEMDDMGNQLTEAKAQLDAVLAEINQIALSIPNL
type: DOMAIN
name: Ser-tRNA-synth_1_N
description: Serine-tRNA synthetase, type1, N-terminal
Protein sequence:
MKVKGIRKNYQHLWRWGTMLLGMLMICSATEQLWVTVYYGVPVWKEATTTLFCASNAKAYDTEAHNVWATYACVPTDPNPQEVVLENVTEEFNMWKNNMVDQMHEDIISLWEQSLKPCVQLTPLCVTLNCTEMRNNTNNNTTSSNNVTDSEWSRDMRNCSFNITTSIKNKVQQKYAMFYKLDVVQIKDDNNITSYRLISCNTSVITQACPKINFDPIPIHYCAPAGFAILKCRDNKFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEGIVIRSENLTNNAKTIIVQLKEAVQINCTRPNNNTRRSINMGPGRAFFTTGDVIGDIRQAHCNISKAKWNDTLKQIAKKLGEKFIGKTIAFKNSSGGDIEIEMHSFNCGGEFFYCNTTQLFNSTWNSTNWNNTEKSNSTEVITLPCRIKQIINMWQKVGKAMYAPPIAGQINCSSSITGLILTRDGGDNSTNNTEIFRPVGGDMRDNWRSELYKYKVVRIEPLGVAPTRARRRVVQREKRAIGLGAVFIGFLGAAGSTMGAASVTLTVQARQLLSGIVQQQNNLLKAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQQLLGLWGCSGKLICTTAVPWNTSWSNKSYTQIWDNMTWMQWEKEIDNYTTFIYTLIEESQNQQERNEQELLELDKWASLWSWFDITKWLWYIKIFIMVVAGLVGLRIVFVVLSVVNRVRKGYSPLSFQTRLPAQRGPDRPEGIEEEGGERDRDRSERLVDGFLAIIWVDLRSLFLFI

Annotated regions:
phrase: VQARQLLSGIVQQQNNLLKAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQQLLGLWGCSGKLICTTAVPWNTSWSNKSYTQIWDNMTWMQWEKEIDNYTTFIYTLIEESQNQQERNEQELLELD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKEATTTLFCASNAKAYDTEAHNVWATYACVPTDPNPQEVVLENVTEEFNMWKNNMVDQMHEDIISLWEQSLKPCVQLTPLCVTLNCTEMRNNTNNNTTSSNNVTDSEWSRDMRNCSFNITTSIKNKVQQKYAMFYKLDVVQIKDDNNITSYRLISCNTSVITQACPKINFDPIPIHYCAPAGFAILKCRDNKFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEGIVIRSENLTNNAKTIIVQLKEAVQINCTRPNNNTRRSINMGPGRAFFTTGDVIGDIRQAHCNISKAKWNDTLKQIAKKLGEKFIGKTIAFKNSSGGDIEIEMHSFNCGGEFFYCNTTQLFNSTWNSTNWNNTEKSNSTEVITLPCRIKQIINMWQKVGKAMYAPPIAGQINCSSSITGLILTRDGGDNSTNNTEIFRPVGGDMRDNWRSELYKYKVVRIEPLGVAPTRARRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: MGAASVTLTVQARQLLSGIVQQQNNLLKAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQQLLGLWGCSGKLICTTAVPWNTSWSNKSYTQIWDNMTWMQWEKEIDNYTTFIYTLIEESQNQQERNEQELLELDKWASLWSWFDITKWLWYIKIFIMVVAGLVGLRIVFVVLSVVNRVRKGYSPLSFQ
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MAVARSSRSAAATPRSGAEIRAAFLSFYEERGHKVMASASLIPEDPTVLLTIAGMLPFKPVFLGQQKRPAPRATSSQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKQQAIEWAWELSTDLFGIDPKHLVVSVFREDDEAEQIWRDVVGVNPKRIIRMDEADNFWASGPTGPCGPCSEIYYDFNPELGDEGIDLEDDDRFIEFYNLVFMQYNRDAEGTLTPLANRNIDTGLGLERMAQILQKVPNNYETDLIFPLIQAAADLAGVDYHQLDDAGQTSLKVIGDHSRAVTQLICDGVSASNLGRGYILRRLLRRVVRHGRLLGIHQPFLVTMGQASIALLKDAYPSVIERQEVILAELQREESRFLETLERGEKLLADVLESKPKQISGAQAFELYDTYGFPLELTQEIAEEHGLDVDLAGFEQAMEQQRQRAKAAAVSIDLTLQDAIDQVAADLNATSFEGYDLLVQSSSTVQALLVNGEAAASASDGDVVQVVLDNTPFYGEGGGQVGDRGLLVGDGPDGNGLIVVIEGVSRNRGVFVHSGRVQLGRLGVGDVVHGQVDRACRRRAQANHTATHLLQAALKQVVDEGIGQAGSLVNFERLRFDFHCPRAVKPEELEQIETLINGWISDAQSLEVNEMAIDQAKAAGAVAMFGEKYADVVRVVDVPGVSMELCGGTHVGNTAEIGLFKIVSESGVAAGIRRIEAVAGASVLAYLNEREVVVKQLGDRFKAQPGEIVERVVALQEELKNSQKALTAARSELAVAK

Annotated regions:
phrase: RSGAEIRAAFLSFYEERGHKVMASASLIPEDPTVLLTIAGMLPFKPVFLGQQKRPAPRATSSQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKQQAIEWAWELSTDLFGIDPKHLVVSVFREDDEAEQIWRDVVGVNPKRIIRMDEADNFWASGPTGPCGPCSEIYYDFNPELGDEGIDLEDDDRFIEFYNLVFMQYNRDAEGTLTPLANRNIDTGLGLERMAQILQKVPNNYETDLIFPLIQAAADLAGVDYHQLDDAGQTSLKVIGDHSRAVTQLICDGVSASNLGRGYILRRLLRRVVRHGRLLGIHQPFLVTMGQASIALLKDAYPSVIERQEVILAELQREESRFLETLERGEKLLADVLESKPKQISGAQAFELYDTYGFPLELTQEIAEEHGLDVDLAGFEQAMEQQRQRAKAAAVSIDLTLQDAIDQVAADLNATSFEGYDLLVQSSSTVQALLVNGEAAASASDGDVVQVVLDNTPFYGEGGGQVGDRGLLVGDGPDGNGLIVVIEGVSRNRGVFVHSGRVQLGRLGVGDVVHGQVDRACRRRAQANHTATHLLQAALKQVVDEGIGQAGSLVNFERLRFDFHCPRAVKPEELEQIETLINGWISDAQSLEVNEMAIDQAKAAGAVAMFGEKYADVVRVVDVPGVSMELCGGTHVGNTAEIGLFKIVSESGVAAGIRRIEAVAGASVLAYLN
type: DOMAIN
name: Ala-tRNA-synth_IIc_core
description: Alanyl-tRNA synthetase, class IIc, core domain

phrase: VRVVDVPGVSMELCGGTHVGNTAEIGLFKIVSESGVAAGIRRI
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD

phrase: EIRAAFLSFYEERGHKVMASASLIPEDPTVLLTIAGMLPFKPVFLGQQKRPAPRATSSQKCIRTNDIENVGRTARHHTFFEMLGNFSFGDYFKQQAIEWAWELSTDLFGIDPKHLVVSVFREDDEAEQIWRDVVGVNPKRIIRMDEADNFWASGPTGPCGPCSEIYYDFNPELGDEGIDLEDDDRFIEFYNLVFMQYNRDAEGTLTPLANRNIDTGLGLERMAQILQKVPNNYETDLIFPLIQAAADLAGVDYHQLDDAGQTSLKVIGDHSRAVTQLICDGVSASNLGRGYILRRLLRRVVRHGRLLGIHQPFLVTMGQASIALLKDAYPSVIERQEVILAELQREESRFLETLERGEKLLADVLESKPKQISGAQAFELYDTYGFPLELTQEIAEEHGLDVDLAGFEQAMEQQRQRAKAAAVSIDLTLQDAIDQVAADLNATSFEGYDLLVQSSSTVQALLVNGEAAASASDGDVVQVVLDNTPFYGEGGGQVGDRGLLVGDGPDGNGLIVVIEGVSRNRGVFVHSGRVQLGRLGVGDVVHGQVDR
type: DOMAIN
name: Ala-tRNA-synth_IIc_N
description: Alanyl-tRNA synthetase, class IIc, N-terminal

phrase: VRVVDVPGVSMELCGGTHVGNTAEIGLFKIVSESGVAAGIRRI
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD
Protein sequence:
MISKHCKEAGNHRMSSPALNYVVGLLARREYSEFELRCKMQEKGFSEQEIDDTLAFCQQKNWQNDRRFAENYLTFRAQRGYGFARIKQELQQLKGISSALISEAEQTLAPDWQHHALTVLRKKFPQYAEITDLKLKQKVWRYMLSHGFKPEQFAHYVGHTEYEE

Annotated regions:
phrase: HALTVLRKKFPQYAEITDLKLKQKVWRYMLSHGFKPE
type: DOMAIN
name: RecX_HTH_3rd
description: RecX, third three-helical domain

phrase: NDRRFAENYLTFRAQRGYGFARIKQELQQLKGISSALISE
type: DOMAIN
name: RecX_HTH_2nd
description: RecX, second three-helical domain

phrase: ALNYVVGLLARREYSEFELRCKMQEKGFSEQEIDDTLAF
type: DOMAIN
name: RecX_HTH_1st
description: RecX, first three-helical domain
Protein sequence:
MFIVIEGCEGSGKSSLTQLLKDKLMAEGKAVVATREPGGSSLGERVRDWILDPSTTELSPYTELFLFLAARAQHITEKILPALELGKIVVCDRFHDSTIVYQGIVGGLGKEYVTNLCHSVVGQKKILPNLTCLLDIPADEGLKRKQQQKSFDKFENQSLAYHTKIREGFLSLAESRLDSYLVLDARQPIEESLNKVMTAYTELALCKSKER

Annotated regions:
phrase: VCDRFHDSTIVY
type: CONSERVED_SITE
name: Thymidylate_kin_CS
description: Thymidylate kinase, conserved site

phrase: IEGCEGSGKSSLTQLLKDKLMAEGKAVVATREPGGSSLGERVRDWILDPSTTELSPYTELFLFLAARAQHITEKILPALELGKIVVCDRFHDSTIVYQGIVGGLGKEYVTNLCHSVVGQKKILPNLTCLLDIPADEGLKRKQQQKSFDKFENQSLAYHTKIREGFLSLAESRLDSYLVLDARQPIEESLN
type: DOMAIN
name: Thymidylate_kin-like_dom
description: Thymidylate kinase-like domain
Protein sequence:
MTKYTEQEQIRRDKLEFYKKFDVVPFKKAYGLGKLSTSDELNKKYGQFAREELEAKKVKKNISGRLITARGPFLVLKDRKGTIQVYFNKKENPELTKIVETFDLGDILWVRGLLMKTHTGEMTVRAQDIQLLTKALKPLPDKFHGLTDTEERYRHRYLDLITNPESRNTFIMRTKIVQWIRDYFNKLDYLEAETPFLHDYLSGAAAKPFTTHHNSLNQDFVLRIATEIPLKKLVVGGFERVYEMGRIFRNEGYDTTHNPEFTTIEFYEAYSNVEGMMNRTETLIKELCKKIGKSKFVTNGVEVDLSKPFKRVNMIDEVSKKTGKNFRKITLEEAIEVAKAYKIKIEKFFTIGHIINALYEELVEPTLIQPTFLYGHPIEISPLSAKSDDPRFTERAELFINTKEYANMYTELSDPIDQLERFESQLEEKNKGNDEASDIDYDFVDALEYGMPPTGGCGIGIDRLVMLLTETDSIRDVLLFPTLKRIKK

Annotated regions:
phrase: NPESRNTFIMRTKIVQWIRDYFNKLDYLEAETPFLHDYLSGAAAKPFTTHHNSLNQDFVLRIATEIPLKKLVVGGFERVYEMGRIFRNEGYDTTHNPEFTTIEFYEAYSNVEGMMNRTETLIKELCKKIGKSKFVTNGVEVDLSKPFKRVNMIDEVSKKTGKNFRKITLEEAIEVAKAYKIKIEKFFTIGHIINALYEELVEPTLIQPTFLYGHPIEISPLSAKSDDPRFTERAELFINTKEYANMYTELSDPIDQLERFESQLEEKNKGNDEASDIDYDFVDALEYGMPPTGGCGIGIDRLVMLLTETDSIRDVLLFPTL
type: DOMAIN
name: Lys-tRNA-synth_II_C
description: Lysyl-tRNA synthetase, class II, C-terminal

phrase: FIMRTKIVQWIRDYFNKLDYLEAETPFLHDYLSGAAAKPFTTHHNSLNQDFVLRIATEIPLKKLVVGGFERVYEMGRIFRNEGYDTTHNPEFTTIEFYEAYSNVEGMMNRTETLIKELCKKIGKSKFVTNGVEVDLSKPFKRVNMIDEVSKKTGKNFRKITLEEAIEVAKAYKIKIEKFFTIGHIINALYEELVEPTLIQPTFLYGHPIEISPLSAKSDDPRFTERAELFINTKEYANMYTELSDPIDQLERFESQLEEKNKGNDEASDIDYDFVDALEYGMPPTGGCGIGIDRLVMLLTETDSIRDVLLF
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: ISGRLITARGPFLVLKDRKGTIQVYFNKKENPELTKIVETFDLGDILWVRGLLMKTHTGEMTVRAQDIQL
type: DOMAIN
name: NA-bd_OB_tRNA
description: OB-fold nucleic acid binding domain, AA-tRNA synthetase-type

phrase: NISGRLITARGPFLVLKDRKGTIQVYFNKKENPELTKIVETFDLGDILWVRGLLMKTHTGEMTVRAQDIQLLTKALKPLPDKFHGLTDTEERYRHRYLD
type: DOMAIN
name: Lys-tRNA-ligase_II_N
description: Lysine-tRNA ligase, class II, N-terminal

phrase: NKLDYLEAET
type: DOMAIN
name: Lys-tRNA-synth_II_C
description: Lysyl-tRNA synthetase, class II, C-terminal

phrase: LSGAAAKPFTTHHNSL
type: DOMAIN
name: Lys-tRNA-synth_II_C
description: Lysyl-tRNA synthetase, class II, C-terminal

phrase: LKKLVVGGFERVY
type: DOMAIN
name: Lys-tRNA-synth_II_C
description: Lysyl-tRNA synthetase, class II, C-terminal

phrase: FRNEGYDTTHNPEFTTI
type: DOMAIN
name: Lys-tRNA-synth_II_C
description: Lysyl-tRNA synthetase, class II, C-terminal

phrase: QPTFLYGHPIEISPLS
type: DOMAIN
name: Lys-tRNA-synth_II_C
description: Lysyl-tRNA synthetase, class II, C-terminal

phrase: TEERYRHRYLDLITNPESRNTFIMRTKIVQWIRDYFNKLDYLEAETPFLHDYLSGAAAKPFTTHHNSLNQDFVLRIATEIPLKKLVVGGFERVYEMGRIFRNEGYDTTHNPEFTTIEFYEAYSNVEGMMNRTETLIKELCKKIGKSKFVTNGVEVDLSKPFKRVNMIDEVSKKTGKNFRKITLEEAIEVAKAYKIKIEKFFTIGHIINALYEELVEPTLIQPTFLYGHPIEISPLSAKSDDPRFTERAELFINTKEYANMYTELSDPIDQLERFESQLEEKNKGNDEASDIDYDFVDALEYGMPPTGGCGIGIDRLVMLLTETDSIRDVLLFPT
type: DOMAIN
name: Aa-tRNA-synt_II
description: Aminoacyl-tRNA synthetase, class II (D/K/N)
Protein sequence:
MAFKFKTFAAVGALIGSLALVGCGQDEKDPNHIKVGVIVGAEQQVAEVAQKVAKDKYGLDVELVTFNDYVLPNEALSKGDIDANAFQHKPYLDQQLKDRGYKLVAVGNTFVYPIAGYSKKIKSLDELQDGSQVAVPNDPTNLGRSLLLLQKVGLIKLKDGVGLLPTVLDVVENPKNLKIVELEAPQLPRSLDDAQIALAVINTTYASQIGLTPAKNGIFVEDKDSPYVNLIVTREDNKDAENVKKFVQAYQSDEVYEAANKVFNGGAVKGW

Annotated regions: