nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MQGRLSAWLAKHKLAHRPLGFDYQGTETLQIKAEDWVSIAVALYVYGFNYLRSQCAYDVAPGGSLASVYHLTKINDNADQPEEVCIKVFVPREDPRIPSVLRIWKGANFQERESYDMLGIFYESHPCLKRILMPESWIGWPLRKDYIAPDFYEIQDSH

Annotated regions:
phrase: ERESYDMLGIFYESHPCLKRI
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_CS
description: NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site

phrase: QIKAEDWVSIAVALYVYGFNYLRSQCAYDVAPGGSLASVYHLTKINDNADQPEEVCIKVFVPREDPRIPSVLRIWKGANFQERESYDMLGIFYESHPCLKRILMPESWIGWPLRKDYI
type: DOMAIN
name: NADH_UbQ_OxRdtase_30kDa_su
description: NADH:ubiquinone oxidoreductase, 30kDa subunit
Protein sequence:
MFSYSSSDWQRRFDEPEKPSRIIAHHDERGPFAKDRARVLHSAALRRLADKTQVVGPRDGDNPRTRLTHSLEVAQIARGIGTGLGLDADLCEMAGLTHDIGHPPYGHNGEKALAEIAQDCGGFEGNAQTLRILSKLEPKIVDDHDQSYGLNLTRAALDAACKYPRTKTNPDGSVNKKYGCYDEDAHILQWVRQGHEDTSACVEAQAMDFSDDIAYSVHDVEDGIVSGRVHLGVLWDFVELAELAEKGARAFGGTPEALVDAADHLRELPIISAAADFDGSLRGYVDLKAMTSQLVGRYVGAVIEASRAANPTGVFGRSTGQVVVPDQVLAEVTLLKTIAVLYVMDDPTHRQRQDRQRERIYRVYDYLVAGGRGALDPMFRLWWEQAESEAQRQRVIIDNISSMTESRLERVAKQSAELSSFMG

Annotated regions:
phrase: RLTHSLEVAQIARGIGTGLGLDADLCEMAGLTHDIGHPPYGHNGEKAL
type: DOMAIN
name: HD_domain
description: HD domain

phrase: VVVPDQVLAEVTLLKTIAVLYVMDDPTHRQRQDRQRERIYRVYDYLVAGGRGALDPMFRLWWEQAESEAQRQRVIIDNISSMTESRLERV
type: DOMAIN
name: PHydrolase_assoc_dom
description: Phosphohydrolase-associated domain

phrase: NPRTRLTHSLEVAQIARGIGTGLGLDADLCEMAGLTHDIGHPPYGHNGEKALAEIAQDCGGFEGNAQTLRILSKLEPKIVDDHDQSYGLNLTRAALDAACKYPRTKTNPDGSVNKKYGCYDEDAHILQWVRQGHEDTSACVEAQAMDFSDDIAYSVHDVEDGI
type: DOMAIN
name: HD/PDEase_dom
description: HD/PDEase domain

phrase: RTRLTHSLEVAQIARGIGTGLGLDADLCEMAGLTHDIGHPPYGHNGEKALAEIAQDCGGFEGNAQTLRILSKLEPKIVDD
type: DOMAIN
name: HD/PDEase_dom
description: HD/PDEase domain

phrase: RLTHSLEVAQIARGIGTGLGLDADLCEMAGLTHDIGHPPYGHNGEKALAEIAQDCGGFEGNAQTLRILSKLEPKIVDDHDQSYGLNLTRAALDAACKYPRTKTNPDGSVNKKYGCYDEDAHILQWVRQGHEDTSACVEAQAMDFSDDIAY
type: DOMAIN
name: HD_domain
description: HD domain
Protein sequence:
MKLAEVMEGVAWEAWDGPREADIRGLAYRADGVEEGDAFCTWRGTASDGHVHVPLAVARGARALVVEQEVSAPGLPVVRVASGRRALAGMAANLHRHPARSLAMAGVTGTNGKTSTVFLLHHLLEAAGLRCGLIGTIRHQSGSRILPSSRTTPESADLHLLLAEMRDDGCRAAAMEVSSHALDQGRVDGIAYQVAVFTNLTQDHLDYHGTLEAYYAAKARLFEGLAPGAHAVVNLGDSWGRRLAGQLPAGVRLHGYAVDGAAPSSARSLRLEASGTSFQWERPDGTYSVRTPWIGAFNAANALAAAEAACALGLNAEDVARCLASAPPVPGRMEKVPWDGPFTVLVDYAHTDDALSHVLATLRPLARGRLLVLAGCGGDRDKAKRPLMARAASEGADACIFTSDNPRSEDPLAILRDMQAGVPDAANVRIIPDRSEAIAAAIHAARPGDVVLLAGKGHETNQEVRGVRSPFSDREEALRVLAQWRGSAA

Annotated regions:
phrase: VTGTNGKTSTVFLLHHLLEAAGLRCGLIGTIRHQSGSRILPSSRTTPESADLHLLLAEMRDDGCRAAAMEVSSHALDQGRVDGIAYQVAVFTNLTQDHLDYHGTLEAYYAAKARLFEGLAPGAHAVVNLGDSWGRRLAGQLPAGVRLHGYAVDGAAPSSARSLRLEASGTSFQWERPDGTYSVRTPWIGAFNAANALAAAE
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRMEKVPWDGPFTVLVDYAHTDDALSHVLATLRPLARGRLLVLAGCGGDRDKAKRPLMARAASEGADACIFTSDNPRSEDPLAILRDMQAGVPDAANVRIIPDRSEAIAAAIHAARPGDVVLLAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MGGKWSKSSIVGWPQVRDRIKQTPAAAEGVGATSQDLDKHGAITSSNMNNADNVWLRAHEEEGDDDGVGFPVKPQVPLRPMTYKGAFDLSFFLKEKGGLDGLIYSKKRQDILDLWVYNTQGYFPDWQNYTQGPGTRFPLCFGWCFKLVPVDPKDVEENNKGEDKCLLHPMSQHGMEDPEGEVLMWKFDSALARKHIARELHPEFFKDC

Annotated regions:
Protein sequence:
MKHMSIRAEEISALIKQQIENYQSEIEVSDVGTVIQVGDGIARAHGLDNVMAGELVEFSNGVMGLAQNLEENNVGIIILGPYTEIREGDEVRRTGRIMQVPVGKELIGRVVNPLGQPVDGLGPINTTNTRPIESPAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTAVALDTIINQKDEDMICIYVAIGQKESTVRNVVETLRKHGALEYTIVVTASASQPAPLLYLAPYAGVTMGEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSDAKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAIDAGTSVSRVGGSAQIKAMSKVSGTLRLDLASYRELEAFAQFGSDLDKATQAKLNRGARTVEVLKQGLHKPLRVEKQVIILYALTRGFLDDIPVVDITRFEEEFHAWLDSNATDLLEEIRTTKKLADDDKFAAAINGFKKVFVASE

Annotated regions:
phrase: VSDVGTVIQVGDGIARAHGLDNVMAGELVEFSNGVMGLAQNLEENNVGIIILGPYTEIREGDEVRRT
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_N
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain

phrase: MSKVSGTLRLDLASYRELEAFAQFGSDLDKATQAKLNRGARTVEVLKQGLHKPLRVEKQVIILYALTRGFLDDIPVVDITRFEEEFHAWLDSNATDLLEEIRTTKKLADDDKFAAAINGFKKV
type: DOMAIN
name: ATP_synth_asu_C
description: ATP synthase, alpha subunit, C-terminal

phrase: PAIDAGTSV
type: ACTIVE_SITE
name: ATPase_a/bsu_AS
description: ATPase, alpha/beta subunit, nucleotide-binding domain, active site

phrase: GIKAIDALVPIGRGQRELIIGDRQTGKTAVALDTIINQKDEDMICIYVAIGQKESTVRNVVETLRKHGALEYTIVVTASASQPAPLLYLAPYAGVTMGEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSDAKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAIDAGTSV
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_nucl-bd
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain

phrase: QIKAMSKVSGTLRLDLASYRELEAFAQFGSDLDKATQAKLNRGARTVEVLKQGLHKPLRVEKQVIILYALTRGFLDDIPVVDITRFEEEFHAWLDSNATDLLEEIRTTKKLADDD
type: DOMAIN
name: ATP_synth_asu_C
description: ATP synthase, alpha subunit, C-terminal

phrase: IMQVPVGKELIGRVVNPLGQPVDGLGPINTTNTRPIESPAPGVMDRKSVHEPLQTGIKAIDALVPIGRGQRELIIGDRQTGKTAVALDTIINQKDEDMICIYVAIGQKESTVRNVVETLRKHGALEYTIVVTASASQPAPLLYLAPYAGVTMGEEFMYNGKHVLVVYDDLSKQAAAYRELSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSDAKGGGSLTALPFIETQAGDVSAYIPTNVISITDGQIFLQSDLFFSGVRPAIDAGTSVSRV
type: DOMAIN
name: ATP_synth_F1_a_nt-bd_dom
description: ATP synthase, F1 complex, alpha subunit nucleotide-binding domain
Protein sequence:
MVHPVKLGRNVRMSYSKIDEVIDMPNLIEIQKNSYEQFLKEGFKEVFKDVNPITDYTGNLILEFVDYSLDEPPKYSVDECKERDATYAAPLKVKVRLINKETGEVKEQEIFMGDFPLMTETGTFIINGAERVIVSQLVRSPGIYYAMKIDKAGKQLFSNTVIPNRGAWLEYETDSNDVLSVRIDRTRKLPLTVLVRALGYGTDLEITELFGEDERILATIQKDSTKTEEEGLLEIYKRLRPGEPPTVESAKALLHGLFFDPKRYDLAKPGRFKFNKKLSIAARIHGFIAGENIKDPDTGEIIVAEGETISREKAETIQNAGVNTVILRVDGKNVKVIGNDMVDIKRYVDFDPKEIGINEKVKRDVLMEILEEYKGKGDDAIKKALQERIDDLIPKHITKEDIISSISYIIGLSYGIGSTDDIDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMTIQDLDVVTPQALINIRPVAAAIKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLSRERAGFEVRDVHHSHYGRMCPIETPEGPNIGLIGSLSTYARVNEYGFIETPYRKVSKEEPGKVTNEIVYLTADEEDEYIIAQANEPLDEEGRFISNKVVCRYKEEFIEVDPSKIDFMDVSPKQIVSVATSMIPFLENDDANRALMGANMQRQAVPLIKTESPIVGTGIEYRAARDSGVVILAKNPGVVEKVTANEIIIRTKDGKRDTYKLLKYMRSNQGTCINQRPIVKKGEEVEAGDVIADGPSTDNGEIA

Annotated regions:
phrase: AKNPGVVEKVTANEIIIRTKDGKRDTYKLLKYMRSNQGTCINQRPIVKKGEEVEAG
type: DOMAIN
name: DNA-dir_RNAP_su2_dom
description: DNA-directed RNA polymerase, subunit 2, hybrid-binding domain

phrase: QFMDQTNPLAELTHKRRLSALGPGGLSRERAGFEVRDVHHSHYGRMCPIETPEGPNIGLIGSLSTYAR
type: DOMAIN
name: RNA_pol_Rpb2_3
description: RNA polymerase Rpb2, domain 3

phrase: YRKVSKEEPGKVTNEIVYLTADEEDEYIIAQANEPLDEEGRFISNKVVCRYKEEFIEVDPSKIDFMDV
type: DOMAIN
name: DNA-dir_RNA_pol_bsu_external_1
description: DNA-directed RNA polymerase, beta subunit, external 1 domain

phrase: RSPGIYYAMKIDKAGKQLFSNTVIPNRGAWLEYETDSNDVLSVRIDRTRKLPLTVLVRALGYGTDLEITELFGEDERILATIQKDSTKTEEEGLLEIYKRLRPGEPPTVESAKALLHGLFFDPKRYDLAKPGRFKFNKKLS
type: DOMAIN
name: RNA_pol_Rpb2_2
description: RNA polymerase Rpb2, domain 2

phrase: KKALQERIDDLIPKHITKEDIISSISYIIGLSYGIGSTDDIDHLGNRRL
type: DOMAIN
name: RNA_pol_Rpb2_2
description: RNA polymerase Rpb2, domain 2

phrase: NLIEIQKNSYEQFLKEGFKEVFKDVNPITDYTGNLILEFVDYSLDEPPKYSVDECKERDATYAAPLKVKVRLINKETGEVKEQEIFMGDFPLMTETGTFIINGAERVIVSQLVRSPGIYYAMKIDKAGKQLFSNTVIPNRGAWLEYETDSNDVLSVRIDRTRKLPLTVLVRALGYGTDLEITELFGEDERILATIQKDSTKTEEEGLLEIYKRLRPGEPPTVESAKALLHGLFFDPKRYDLAKPGRFKFNKKLSIAARIHGFIAGENIKDPDTGEIIVAEGETISREKAETIQNAGVNTVILRVDGKNVKVIGNDMVDIKRYVDFDPKEIGINEKVKRDVLMEILEEYKGKGDDAIKKALQERIDDLIPKHITKEDIISSISYIIGLSYGIGSTDDIDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMTIQDLDVVTPQALINIRP
type: DOMAIN
name: RNA_pol_bsu_protrusion
description: RNA polymerase, beta subunit, protrusion
Protein sequence:
MSRLRAPVAKFLADGLKGIRSTALAGSRLSNCRYTSTSSKDTDTSSHMTHFGFKDVPEDEKEHLVKNVFSSVAKKYDEMNDAMSLGIHRLWKNIFVSRLNPGNSTVPMKILDVAGGTGDIAFRILNHATNHNGDRNTRVIVADINPDMLSVGLRRSKKTPYYDSGRVEFIEQNAEILDKIPDNSIDMYTIAFGIRNCTHIPKVLEQAYRVLKPGGVFSCLEFSKVYPAPLAELYRQYSFKILPLLGTIIAGDSQSYEYLVESIERFPDAKTFAKMIEDAGFTLAGETGYETLSFGIAAIHTGIKL

Annotated regions:
phrase: YDEMNDAMSLGIHRL
type: CONSERVED_SITE
name: UbiE/COQ5_MeTrFase_CS
description: UbiE/COQ5 methyltransferase, conserved site

phrase: RVLKPGGVFSCLEF
type: CONSERVED_SITE
name: UbiE/COQ5_MeTrFase_CS
description: UbiE/COQ5 methyltransferase, conserved site
Protein sequence:
MVSAPVPEPARPRSPRGLGAPELARALHAALPAEAEGSVLTGVTLDSRSVQPGDLYCALPGAVTHGARFAAQAAAAGALLALTDPTGAEDCARAALPALVVDDPRRDTARAAALVLGDPAEQLGTIGVTGTNGKTSVTTILTGALRHLGRSAGVVGTSGTSYRDARGGDHAIGTVRTTPEAPELHGLLARMVEDGVEVAAMEISSHAMVLHRADGVVLDAACFTNLSQDHLDFHPTMEDYFAAKAMLFTPEHARLGVVCVDDDWGRRLADSAPIPVTTYSATGRPADHQVRDIRAEGFGSEFTVVSAAGERTLRAALPGVHYVANTLAAALLLEAVGIAGPEVDAALAEAGTVPGRMELVAERPVRGVVDYSHTPDALEKALATLRTVPGTRHLIAVMGAGGDRDRGKRPLMGEVAARLADVVIITDDNPRSEDPAAIRGEVAGGVPASTSAQVHEVDGRGEAIALAARLADVGDTILVAGKGAESGQTIGGIVHPFDDRAVLRDALAARGASTRTDQDGEG

Annotated regions:
phrase: VTGTNGKTSVTTILTGALRHLGRSAGVVGTSGTSYRDARGGDHAIGTVRTTPEAPELHGLLARMVEDGVEVAAMEISSHAMVLHRADGVVLDAACFTNLSQDHLDFHPTMEDYFAAKAMLFTPEHARLGVVCVDDDWGRRLADSAPIPVTTYSATGRPADHQVRDIRAEGFGSEFTVVSAAGERTLRAALPGVHYVANTLAAAL
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRMELVAERPVRGVVDYSHTPDALEKALATLRTVPGTRHLIAVMGAGGDRDRGKRPLMGEVAARLADVVIITDDNPRSEDPAAIRGEVAGGVPASTSAQVHEVDGRGEAIALAARLADVGDTILVAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: TGVTLDSRSVQPGDLYCALPGAVTHGARFAAQAAAAGALLALTDPTGAEDCARAALPALVVDDPRRDTARAAA
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain
Protein sequence:
MSSGSIHVITGPMFSGKTSELVRRIKRFMLSNFKCIIIKHCGDNRYNEDDINKVYTHDLLFMEATASSNLSVLVPTLLNDGVQVIGIDEAQFFLDIVEFSESMANLGKTVIVAALNGDFKRELFGNVYKLLSLAETVSSLTAICVKCYCDASFSKRVTENKEVMDIGGKDKYIAVCRKCFFSN

Annotated regions:
phrase: GGKDKYIAVCRKC
type: CONSERVED_SITE
name: Thymidine_kinase_CS
description: Thymidine kinase, conserved site
Protein sequence:
MIIEKILGNLHQQPDAYASHHKEKVVLPSTLLVKRIQRVTTDHGKELGIRLPAGTGDLRDGDILAIDQHNIIVVSVLPTDVLVIKARTIHEMGVVAHSLGNRHLQAQFFDGSSEYGAEVMVCQYDHTVEDYLKSVGVPYDRQERVMPVPFRHAEHSH

Annotated regions:
phrase: DVLVIKARTIHEMGVVAHSLGNRHLQAQFFDGSSEYGAEVMVCQYDHTVEDYLKSVGVPYDRQE
type: DOMAIN
name: UreE_C_dom
description: Urease accessory protein UreE, C-terminal domain

phrase: ILGNLHQQPDAYASHHKEKVVLPSTLLVKRIQRVTTDHGKELGIRLPAGTGDLRDGDILAIDQHNI
type: DOMAIN
name: UreE_N
description: UreE urease accessory, N-terminal

phrase: HQQPDAYASHHKEKVVLPSTLLVKRIQRVTTDHGKELGIRLPAGTGDLRDGDILAIDQHNI
type: DOMAIN
name: UreE_N
description: UreE urease accessory, N-terminal
Protein sequence:
MKAQIQGMRRKLTGVAAVAATTMALSGVFAGQALAKGAELLGQPTPGAYDLQRAASPLKYEAIAFHDHILMPIITAITLLVLGLLIWIVIRYNAKANPVPAKFSHNTTVEIIWTIGPVLILMVIAIFSFRLLFAYNDMPKPYLTVKATGYQWYWGYEYPDQKISEITSVPLKQEEAVAKGVPYLLAADKPMVVPVNQVIRVQVTGADVIHAFALPAFGLKTDAIPGRLNETWFKADKIGVYYGQCSELCGVDHSNMPIEIHVVSQADFDAWVKSKTAPAAPAATPAAAPAAAGAPATVTPAATAPASAPAAAPAAPAA

Annotated regions:
phrase: LTVKATGYQWYWGYEYPDQKISEITSVPLKQEEAVAKGVPYLLAADKPMVVPVNQVIRVQVTGADVIHAFALPAFGLKTDAIPGRLNETWFKADKIGVYYGQCSELCGVDHSNMPIEIH
type: DOMAIN
name: CcO_II-like_C
description: Cytochrome c oxidase subunit II-like C-terminal

phrase: AFHDHILMPIITAITLLVLGLLIWIVIRYNAKANPVPAKFSHNTTVEIIWTIGPVLILMVIAIFSFRLLFAYNDMPKPYLTVKATGYQWYWGYEYPDQKISEITSVPLKQEEAVAKGVPYLLAADKPMVVPVNQVIRVQVTGADVIHAFALPAFGLKTDAIPGRLNETWFKADKIGVYYGQCSELCGVDHSNMPIEIHVVSQADFDAW
type: DOMAIN
name: Cyt_c_oxidase_su2
description: Cytochrome c oxidase, subunit II

phrase: QPTPGAYDLQRAASPLKYEAIAFHDHILMPIITAITLLVLGLLIWIVIRYNAKANPVPAKFSHNTTVEIIWTIGPVLILMVIAIFSFRLLFAYNDM
type: DOMAIN
name: Cyt_c_oxidase_su2_TM_dom
description: Cytochrome C oxidase subunit II, transmembrane domain

phrase: KPYLTVKATGYQWYWGYEYPDQKISEITSVPLKQEEAVAKGVPYLLAADKPMVVPVNQVIRVQVTGADVIHAFALPAFGLKTDAIPGRLNETWFKADKIGVYYGQCSELCGVDHSNMPIEIHVVSQADFDAWVK
type: DOMAIN
name: CcO_II-like_C
description: Cytochrome c oxidase subunit II-like C-terminal

phrase: TPGAYDLQRAASPLKYEAIAFHDHILMPIITAITLLVLGLLIWIVIRYNAKANPVPAKFSHNTTVEIIWTIGPVLILMVIAIFSFR
type: DOMAIN
name: Cyt_c_oxidase_su2_TM_dom
description: Cytochrome C oxidase subunit II, transmembrane domain

phrase: VIHAFALPAFGLKTDAIPGRLNETWFKADKIGVYYGQCSELCGVDHSN
type: BINDING_SITE
name: Copper_CuA
description: Copper centre Cu(A)

phrase: MKAQIQGMRRKLTGVAAVAATTMALSGVFAGQAL
type: CONSERVED_SITE
name: TAT_signal
description: Twin-arginine translocation pathway, signal sequence

phrase: PYLTVKATGYQWYWGYEYPDQKISEITSVPLKQEEAVAKGVPYLLAADKPMVVPVNQVIRVQVTGADVIHAFALPAFGLKTDAIPGRLNETWFKADKIGVYYGQCSELCGVDHSNMPIEIHVVSQADFDA
type: DOMAIN
name: CcO_II_C
description: Cytochrome c oxidase subunit 2, C-terminal
Protein sequence:
MKPTHSPKTYRVKSFGCQMNVYDGERMAEMLDEKGIEPAPEGEDADLVVLNTCHIREKAVDKVYSDIGRLTKGKTQTKAPMIAVAGCVAQAEGEEIMARAPAVSMVVGPQAYHRLPGMIDAAVAGKRSTDTDMPADAKFAALPKRRKSAPSAFLTIQEGCDKFCTYCVVPYTRGAEISRPFSALIDEAKKLVEAGAKEITLLGQNVSAWTGEDAKGRALGMAGLIRELAKDPDLKRVRYTTSHPADMDDELIATHGEVEKLMPYLHLPVQSGNDRVLKAMNRSHTAESYLRLLERFRAARPDLALSGDFIVGFPGETEAEFEDTLKIVDEVRYAQAYSFKYSPRPGTPAATMERQVPKEVMDERLQRLQAALNRDQAAFNAGSVGRTCEVLVERTGKHPGQWLGKSPWLQSVWFDGDVAIGDLVQVELVEAGPNSLAGQLLETVAA

Annotated regions:
phrase: KTYRVKSFGCQMNVYDGERMAEMLDEKGIEPAPEGEDADLVVLNTCHIREKAVDKVYSDIGRLTKGKTQTKAPMIAVAGCVAQAEGEEIMARAPAVSMVVGPQAYHRLPGMIDAAV
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: RKSAPSAFLTIQEGCDKFCTYCVVPYTRGAEISRPFSALIDEAKKLVEAGAKEITLLGQNVSAWTGEDAKGRALGMAGLIRELAKDPDLKRVRYTTSHPADMDDELIATHGEVEKLMPYLHLPVQSGNDRVLKAMNRSHTAESYLRLLERFRAARPDLALSGDFIVGFPGETEAEFEDTLKIVDEVRYAQAYSFKYSPRPGTPAATMERQVPKEVMDERLQRLQAALNRDQA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TIQEGCDKFCTYCVVPYTRGAEISRPFSALIDEAKKLVEAGAKEITLLGQNVSAWTGEDAKGRALGMAGLIRELAKDPDLKRVRYTTSHPADMDDELIATHGEVEKLMPYLHLPVQSGNDRVLKAMNRSHTAESYLRLLERFRAARPDLALSGDFIVGFPGETEAEFEDTL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: YRVKSFGCQMNVYDGERMAEMLDEKGIEPAPEGEDADLVVLNTCHIREKAVDKVYSDIGRLTKGKTQTKAPMIAVAGCVAQAEGEEIMARAPAVSMVV
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: SPKTYRVKSFGCQMNVYDGERMAEMLDEKGIEPAPEGEDADLVVLNTCHIREKAVDKVYSDIGRLTKGKTQTKAPMIAVAGCVAQAEGEEIMARAPAVSMVVGPQAYHRLPGMIDAAVAGKRSTDTDMPADAKFAALPKRRKSAPSAFLTIQEGCDKFCTYCVVPYTRGAEISRPFSALIDEAKKLVEAGAKEITLLGQNVSAWTGEDAKGRALGMAGLIRELAKDPDLKRVRYTTSHPADMDDELIATHGEVEKLMPYLHLPVQSGNDRVLKAMNRSHTAESYLRLLERFRAARPDLALSGDFIVGFPGETEAEFEDTLKIVDEVRYAQAYSFKYSPRPGTPAATMERQVPKEVMDERLQRLQAALNRDQAAFNAGSVGRTCEVLVERTGKHPGQWLGKSPWLQSVWFDGDVAIGDLVQVELVEAGPNSLAGQLLE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VGRTCEVLVERTGKHPGQWLGKSPWLQSVWFDGDVAIGDLVQVELVEAGPNSLAGQL
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: AGSVGRTCEVLVERTGKHPGQWLGKSPWLQSVWFDGDVAIGDLVQVELVEAGPNSLAGQLL
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: PSAFLTIQEGCDKFCTYCVVPYTRGAEISRPFSALIDEAKKLVEAGAKEITLLGQNVSAWTGEDAKGRALGMAGLIRELAKDPDLKRVRYTTSHPADMDDELIATHGEVEKLMPYLHLPVQSGNDRVLKAMNRSHTAESYLRLLERFRAARPDLALSGDFIVGFPGETEAEFEDTLKIVDEVRYAQAYSFKYSPRPGTPAATMERQVPKEVMDERLQRLQ
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: LTIQEGCDKFCTYCVVPYTR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site
Protein sequence:
MAAIADIIAREILDSRGNPTVEVDVTLESGAQGRAAVPSGASTGAHEAVELRDGDKSRYGGKGVLHAVSFVEGEIFEAIGGMDASEQLRIDETLIAVDGTPNKSRLGANAMLAVSLATAKAAANHQGVPLYRYLGGVYARTLPVPMMNIVNGGKHADNPIDIQEFMIQPVAAPTIADAVRVGAEIFAALKKELSAAGHNTNVGDEGGFAPGLKSAEEALSFITKACEKAGYRPGEDVTFALDCAATEFFKDGVYDLEGEGKKFDAAGMVRYLEDLAAKFPIVSIEDGLAEDDWEGWKLLTDTLGRKVQLVGDDLFVTNPDRLRHGIALGTANAILVKVNQIGTLSETLEAVETAHRAGYAAVMSHRSGETEDSTIADLAVATNCGQIKTGSLSRSDRTAKYNQLIRIEQDLDTSGRYAGRTILRG

Annotated regions:
phrase: IADIIAREILDSRGNPTVEVDVTLESGAQGRAAVPSGASTGAHEAVELRDGDKSRYGGKGVLHAVSFVEGEIFEAIGGMDASEQLRIDETLIAVDGTPNKSRLGANAMLAVSLATAKAAANHQGVPLYRY
type: DOMAIN
name: Enolase_N
description: Enolase, N-terminal

phrase: TLPVPMMNIVNGGKHADNPIDIQEFMIQPVAAPTIADAVRVGAEIFAALKKELSAAGHNTNVGDEGGFAPGLKSAEEALSFITKACEKAGYRPGEDVTFALDCAATEFFKDGVYDLEGEGKKFDAAGMVRYLEDLAAKFPIVSIEDGLAEDDWEGWKLLTDTLGRKVQLVGDDLFVTNPDRLRHGIALGTANAILVKVNQIGTLSETLEAVETAHRAGYAAVMSHRSGETEDSTIADLAVATNCGQIKTGSLSRSDRTAKYNQLIRIEQDLDTSGRYAGRT
type: DOMAIN
name: Enolase_C
description: Enolase, C-terminal TIM barrel domain

phrase: ILVKVNQIGTLSE
type: CONSERVED_SITE
name: Enolase_CS
description: Enolase, conserved site

phrase: ARTLPVPMMNIVNGGKHADNPIDIQEFMIQPVAAPTIADAVRVGAEIFAALKKELSAAGHNTNVGDEGGFAPGLKSAEEALSFITKACEKAGYRPGEDVTFALDCAATEFFKDGVYDLEGEGKKFDAAGMVRYLEDLAAKFPIVSIEDGLAEDDWEGWKLLTDTLGRKVQLVGDDLFVTNPDRLRHGIALGTANAILVKVNQIGTLSETLEAVETAHRAGYAAVMSHRSGETEDSTIADLAVATNCGQIKTGSLSRSDRTAKYNQLIRIEQDLDTSGRYAGRTILR
type: DOMAIN
name: Enolase_C
description: Enolase, C-terminal TIM barrel domain

phrase: IADIIAREILDSRGNPTVEVDVTLESGAQGRAAVPSGASTGAHEAVELRDGDKSRYGGKGVLHAVSFVEGEIFEAIGGMDASEQLRIDETLIAVDGTPNKSRLGANAMLAVSLATAKAAANHQGVPLYRY
type: DOMAIN
name: Enolase_N
description: Enolase, N-terminal
Protein sequence:
MSKNYDIAVVGATGSVGREILEILEERNFPVKNIFCLASERSEGEIINFRDTDIKVIDLKKFNFTDIDLALFSPGATISKKFAPVAASKGCLVIDNTSYFRMEKDIPLIVPEINSSELDSFFSNKKKKNIISNPNCSTIQMVLALKPLHDLASIKRIVVSTYQSVSGKGKKGMDELFSQTKNIYRNENIIKKEFTKQIAFNVIPHIDSFLDNGNTKEEQKMIDETKKILDKNINISATCVRVPVMIGHAESVNIEFNKPISEDQAKEALQNFEGVSVIDYRKDEGYVTPLECAGDDKVYVSRLRSDPTIENGLSLWIVSDNLRKGAALNAVQIAENIIKNKYL

Annotated regions:
phrase: ISATCVRVPVMIGH
type: CONSERVED_SITE
name: Asp-semialdehyde_DH_CS
description: Aspartate-semialdehyde dehydrogenase, conserved site

phrase: DIAVVGATGSVGREILEILEERNFPVKNIFCLASERSEGEIINFRDTDIKVIDLKKFNFTDIDLALFSPGATISKKFAPVAASKGCLVIDNTSYFRMEKDIPLIVPEINSSELDS
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: IAVVGATGSVGREILEILEERNFPVKNIFCLASERSEGEIINFRDTDIKVIDLKKFNFTDIDLALFSPGATISKKFAPVAASKGCLVIDNTSYFRMEKDIPLIVPEINSSEL
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: LKPLHDLASIKRIVVSTYQSVSGKGKKGMDELFSQTKNIYRNENIIKKEFTKQIAFNVIPHIDSFLDNGNTKEEQKMIDETKKILDKNINISATCVRVPVMIGHAESVNIEFNKPISEDQAKEALQNFEGVSVIDYRKDEGYVTPLECAGDDKVYVSRLRSDPTIENGLSLWIVSDNLR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain
Protein sequence:
MIILPIAKILQGIILAADHEVIVQGWVRTRRDSKAGISFLSIYDGSCLDSLQVIINHDLPNYKSDVLHLTTGCSVVITGSIVTSIGVGQHFEIQAKNIKVLGWVKNPETYPITAKKHSLEFLREVAHLRPRTNIIGAVTRVRHTLAQAIHRFMHIEGFFWVSTPLITTFNCEGAGEMFRVSTLDLENLPYTSKGKINYEKDFFGKEAFLTVSGQLNGESYACALSKIYTFGPTFRAENSNTSRHLAEFWMVEPEVAFANLTDIAILAEKMLKYIFNAILIERVDDINFFAEQINKNIIKRLEQFISSNFAQIDYTEAIDILQNCKQKFDHTVFWGMDLFAEHERYLADKHFQAPVVVTNYPKDIKAFYMRINDDGKTVAAMDVLAPGIGEIIGGSQREERLAKLDQRLADRGLNIEDYWWYRDLRSYGTVPHSGFGLGLERLMIYITGMHNIRDVIPFPRNPRQASF

Annotated regions:
phrase: RVRHTLAQAIHRFMHIEGFFWVSTPLITTFNCEGAGEMFRVSTLDLENLPYTSKGKINYEKDFFGKEAFLTVSGQLNGESYACALSKIYTFGPTFRAENSNTSRHLAEFWMVEPEVAFANLTDIAILAEKMLKYIFNAILIERVDDINFFAEQINKNIIKRLEQFISSNFAQIDYTEAIDILQNCKQKFDHTVFWGMDLFAEHERYLADKHFQAPVVVTNYPKDIKAFYMRINDDGKTVAAMDVLAPGIGEIIGGSQREERLAKLDQRLADRGLNIEDYWWYRDLRSYGTVPHSGFGLGLERLMIYITGMHNIRDVI
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: VIVQGWVRTRRDSKAGISFLSIYDGSCLDSLQVIINHDLPNYKSDVLHLTTGCSVVITGSIVTSIGVGQHFEIQAKNIKV
type: DOMAIN
name: NA-bd_OB_tRNA
description: OB-fold nucleic acid binding domain, AA-tRNA synthetase-type

phrase: VAHLRPRTNIIGAVTRVRHTLAQAIHRFMHIEGFFWVSTPLITTFNCEGAGEMFRVSTLDLENLPYTSKGKINYEKDFFGKEAFLTVSGQLNGESYACALSKIYTFGPTFRAENSNTSRHLAEFWMVEPEVAFANLTDIAILAEKMLKYIFNAILIERVDDINFFAEQINKNIIKRLEQFISSNFAQIDYTEAIDILQNCKQKFDHTVFWGMDLFAEHERYLADKHFQAPVVVTNYPKDIKAFYMRINDDGKTVAAMDVLAPGIGEIIGGSQREERLAKLDQRLADRGLNIEDYWWYRDLRSYGTVPHSGFGLGLERLMIYITGMHNIRDVIPFPR
type: DOMAIN
name: Aa-tRNA-synt_II
description: Aminoacyl-tRNA synthetase, class II (D/K/N)
Protein sequence:
MELSYATTLHHRDVVFYVTADRNRAYFVCGGSVYSVGRPRDSQPGEIAKFGLVVRGTGPKDRMVANYVRSELRQRGLRDVRPVGEDEVFLDSVCLLNPNVSSERDVINTNDVEVLDECLAEYCTSLRTSPGVLVTGVRVRARDRVIELFEHPAIVNISSRFAYTPSPYVFALAQAHLPRLPSSLEPLVSGLFDGIPAPRQPLDARDRRTDVVITGTRAPRPMAGTGAGGAGAKRATVSEFVQVKHIDRVVSPSVSSAPPPSAPDASLPPPGLQEAAPPGPPLRELWWVFYAGDRALEEPHAESGLTREEVRAVHGFREQAWKLFGSVGAPRAFLGAALALSPTQKLAVYYYLIHRERRMSPFPALVRLVGRYIQRHGLYVPAPDEPTLADAMNGLFRDALAAGTVAEQLLMFDLLPPKDVPVGSDARADSAALLRFVDSQRLTPGGSVSPEHVMYLGAFLGVLYAGHGRLAAATHTARLTGVTSLVLTVGDVDRMSAFDRGPAGAAGRTRTAGYLDALLTVCLARAQHGQSV

Annotated regions:
Protein sequence:
MPQLLHSLLQDCAVAIPAQLPDAVVTGLSCDSRRVAAGTLFIGLPGSQVDGGSFWPAALERGAAAALIGPAAAAQCPPGPADPVLVLEDPVAEWAGRLAASFWHDPSRRLALIGVTGTNGKTTTTHLIEHLSAGCGKSTALFGTLINRWPGHSVTASHTTAFADVLQGQLARAVEAGAQLAAMEVSSHALDQRRVAGCHFAGAVFTNLTQDHLDYHPSMEAYLEAKARLFSSELLDGSAVVNIDDPWGARLAERLSGQLGERLWRSSLAVAAAEVGPEDLPELRLDDLVFAADGVSGTLITPLGCGAFRSPLVGRFNLMNLLQAVGVLQQQGLPLAQLLEAIPSFRGVPGRMERVMLPEAAELPAVLVDYAHTPDGLENALAACRPFARGQLVCVFGCGGDRDRGKRPQMAAIAARLADRVVVTSDNPRTEDPQRILDDVVAGIPSGTDLTVEVDRAAAIAAAVAMAGPSDLVLIAGKGHEDYQILGTTKVHFDDREEAEKALRARLS

Annotated regions:
phrase: VTGLSCDSRRVAAGTLFIGLPGSQVDGGSFWPAALERGAAAALIGPAAAAQCPPGPADPVLVLEDPVAEWAGRLAAS
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: VTGTNGKTTTTHLIEHLSAGCGKSTALFGTLINRWPGHSVTASHTTAFADVLQGQLARAVEAGAQLAAMEVSSHALDQRRVAGCHFAGAVFTNLTQDHLDYHPSMEAYLEAKARLFSSELLDGSAVVNIDDPWGARLAERLSGQLGERLWRSSLAVAAAEVGPEDLPELRLDDLVFAADGVSGTLITPLGCGAFRSPLVGRFNLMNLLQAVG
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRMERVMLPEAAELPAVLVDYAHTPDGLENALAACRPFARGQLVCVFGCGGDRDRGKRPQMAAIAARLADRVVVTSDNPRTEDPQRILDDVVAGIPSGTDLTVEVDRAAAIAAAVAMAGPSDLVLIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MLGKARELANYQDEPEQLPTGSFGKNAFLRLGFERRPERTVLATLHRRAPLIVQQALYWDEGMPTLPCVSIISNAGGILQGDRYAIEIDLEPDTQAHVTTQSATRIQEMDANFATQTQTITLGANSYLEYIPHPIIPHKHSRFVQQTEVTIHPTATLIYSEVLMAGRKYYGTGELFHYDLFSSKFHAAHTDGTSLFTEKFIVEPARGNVSRLGAMGSFHVFGNLILLTPKTHADRLFETIDPVFDMDEGIAWGASRLPNDAGLLFKVLGMESAPVRAAIRKIWEAARQEVTGASLPENFLWA

Annotated regions:
Protein sequence:
MTGSSARATARIVLATHNAHKVAEFQQIVAGARPDLEVIGYDGPEPIEDGVTFAENALIKARAAAAHTGLPALADDSGICVDVLGGAPGIFSAYWAGHAKDSAENLALLLDQLSDIADPHRSAHFACTIALVVPSAEGADAAEHVVEGLWSGRLARAADGGGGFGYDPAFIPDGQEPGGERTVGRWSAEEKNAQSHRARALAALRPLLASL

Annotated regions:
Protein sequence:
MQGQQKQNAGGGGGDNASPCIVLDGPIIVGAGPSGLAVAATLRQHGAPFTVVERSGGVADLWTNRTYDRLRLHLPKVFCELPHVAFPPDFPTYPTKHDFLRYLHSYAARFAIAPLLRRTVTRAWYDHPASLWRVTTTTTSSSATSVITEYASPWLVVASGENAEVVVPKVKGRERFAGEALHSSEYRSGERFRGMRVLVVGCGNSGMEMCLDLCEHGAMPFMSVRSGVHVLPREMFGASTFGIAMKLLRWLPIKMVDRFLLLVARMVLGDTEKYGLKRPKLGPLEIKNITGKSPVLDVGAWSLIKSGNIKIVPEVESFSGNGARFVDGNEMAFDAVIFATGYRSNVPSWLQEDGELFTEEGKLRSSGSSSEWRWRGPNGLYCVGFSGRGLLGAGADALRAAADIAGRWQETQQAAANISSV

Annotated regions:
Protein sequence:
MRVRGILRNYQQWWIWGSLGFWMLMVCNVVGNLWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEDFNMWKNSMVEQMHTDIISLWDQSLKPCVKLTPLCVTLNCSNVNGNSTGWGKEEIKNCSFNITTELRDKRQKVYSLFYRLDVVPIEEGQGNSSNSGYKEYRLINCNTSAITQACPKVTFNPIPIHYCTPAGYAILKCNEETFNGTGPCKNVSTVQCTHGIKPVVSTQLLLNGSLAEKEVIIRSENITNNVKNIIVQLAEPVRINCTRPNNNTRTSIRIGPGQTFYTSNIIGDIRQAHCNVSRAEWNKALNKIGKQLRKYFVNKTIKFANSSGGDLEITTHSFNCEGEFFYCNTSGLFNGTWNASMQESNSTESNETIILPCRIKQIINMWQRVGQAMYAPPIQGIIKCVSNITGLILTRDGKSSNSTDEIFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRARRRAVGREKRAVGIGAVFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHLLKLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTNVPWNASWSNKSQKEIWENMTWLQWDKEISNYTDIIYHLIKESQNQQEKNEQDLLALDKWADLWNWFDISNWLWYIKIFIMIVGGLIGLRIVFAVLSVINRVRQGYSPLSFRTHTPNPGGLDRPGRIEEEDGEQGKDRSIRLVSGFLALFWDDLRSLCLFSYHRLRDFI

Annotated regions:
phrase: VQARQLLSGIVQQQSNLLRAIEAQQHLLKLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTNVPWNASWSNKSQKEIWENMTWLQWDKEISNYTDIIYHLIKESQNQQEKNEQDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHLLKLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTNVPWNASWSNKSQKEIWENMTWLQWDKEISNYTDIIYHLIKESQNQQEKNEQDLLALDKWADLWNWFDISNWLWYIKIFIMIVGGLIGLRIVFAVLSVINRVRQGYSPLSFR
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKDAETTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIHLENVTEDFNMWKNSMVEQMHTDIISLWDQSLKPCVKLTPLCVTLNCSNVNGNS
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: NSTGWGKEEIKNCSFNITTELRDKRQKVYSLFYRLDVVPIEEGQGNSSNSGYKEYRLINCNTSAITQACPKVTFNPIPIHYCTPAGYAILKCNEETFNGTGPCKNVSTVQCTHGIKPVVSTQLLLNGSLAEKEVIIRSENITNNVKNIIVQLAEPVRINCTRPNNNTRTSIRIGPGQTFYTSNIIGDIRQAHCNVSRAEWNKALNKIGKQLRKYFVNKTIKFANSSGGDLEITTHSFNCEGEFFYCNTSGLFNGTWNASMQESNSTESNETIILPCRIKQIINMWQRVGQAMYAPPIQGIIKCVSNITGLILTRDGKSSNSTDEIFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRARRRAVGREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120