nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MKIALQGLLPEELQALCKEAGQPAFRAKQLWQWLQVQGATRWDQMGNLPRALKDTLAETHTPEPAKIRKESGEPGGTRKWLVGLDDGESIETVLIPARDRNTVCVSTQVGCKMGCAFCASAKCGYARNLAAGEIVAQVQLVAVALGKRPDNVVYMGMGEPFDNYDAVLKSVRILNHPDGLNIGARRITLSTSGVIPGIRRLAGEGIQVELSVSLHAPNPELRRKLMPIENKYPMDDLLRECADYTAKTKRHITFEYTLIQGVNDSLRDAEELAGRLRRFPCRVNLIPLSPVDEFKGDAPSRETMDAFLRALEKRGVEGTLRESKGKGVDAACGQLRRRSQA

Annotated regions:
phrase: STQVGCKMGCAFCASAKCGYARNLAAGEIVAQVQLVAVALGKRPDNVVYMGMGEPFDNYDAVLKSVRILNHPDGLNIGARRITLSTSGVIPGIRRLAGEGIQVELSVSLHAPNPELRRKLMPIENKYPMDDLLRECADYTAKTKRHITFEYTLIQGVNDSL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: NTVCVSTQVGCKMGCAFCASAKCGYARNLAAGEIVAQVQLVAVALGKRPDNVVYMGMGEPFDNYDAVLKSVRILNHPDGLNIGARRITLSTSGVIPGIRRLAGEGIQVELSVSLHAPNPELRRKLMPIENKYPMDDLLRECADYTAKTKRHITFEYTLIQGVNDSLRDAEELAGRLRRFPCRVNLIPLSPVDEFKGDAPSRETMDAFLRALE
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: ARDRNTVCVSTQVGCKMGCAFCASAKCGYARNLAAGEIVAQVQLVAVALGKRPDNVVYMGMGEPFDNYDAVLKSVRILNHPDGLNIGARRITLSTSGVIPGIRRLAGEGIQVELSVSLHAPNPELRRKLMPIENKYPMDDLLRECADYTAKTKRHITFEYTLIQGVNDSLRDAEELAGRLRRFPCRVNLIPLSPVDEFKGDAPSRETMDAFLRALEKRGVEGTLRESKGKGV
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LQGLLPEELQALCKEAGQPAFRAKQLWQWLQVQGATRWDQMGNLPRALKDTLAE
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MQNVGFIGWRGMVGSVLMDRMQQEQDFAHINPVFFTTSQAGQKAPEFGGKDSGVLKDAFNIDELKALDIIVTCQGGDYTSEVYPKLRAGGWNGYWIDAASTLRMEKDAIIVLDPVNEHVIRDGLNKGVKTYVGGNCTVSLMLMALGGLFEKDLVEWVSVATYQAASGAGAKNMRELLVQMGELRDVVKTDLANPASSILEIERAVADKMRGDLPIENFGAPLAGSLIPWIDKLLDSGQTKEEWKGYAETNKILGLSDSPIPIDGLCVRIGALRCHSQAFTIKMKKDLPLAEIEQILAAHNEWVKVIPNDKEATLRELTPTKVTGTLSVPVGRLRKLNMGPEYLAAFTVGDQLLWGAAEPLRRILRLLVA

Annotated regions:
phrase: NVGFIGWRGMVGSVLMDRMQQEQDFAHINPVFFTTSQAGQKAPEFGGKDSGVLKDAFNIDELKALDIIVTCQGGDYTSEVYPKLRAGGWNGYWIDAASTLRMEKDAIIVLDPVNEHVI
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: NVGFIGWRGMVGSVLMDRMQQEQDFAHINPVFFTTSQAGQKAPEFGGKDSGVLKDAFNIDELKALDIIVTCQGGDYTSEVYPKLRAGGWNGYWIDAASTLRMEKDAIIVLDPVNEHVIRD
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: LGGLFEKDLVEWVSVATYQAASGAGAKNMRELLVQMGELRDVVKTDLANPASSILEIERAVADKMRGDLPIENFGAPLAGSLIPWIDKLLDSGQTKEEWKGYAETNKILGLSDSPIPIDGLCVRIGALRCHSQAFTIKMKKDLPLAEIEQILAAHNEWVKVIPNDKEATLRELTPTKVTGTLSVPVGRLRKLNMGPEYLAAFTVGDQLL
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: IDGLCVRIGALRCH
type: CONSERVED_SITE
name: Asp-semialdehyde_DH_CS
description: Aspartate-semialdehyde dehydrogenase, conserved site
Protein sequence:
MDFLVLFLFYLAFLLICVVLICIFTKSQRLKAVVLGGAQVCSRVIPQCLQRAVQTLLHQLFHTRHPTFIVLHLLLQGLVYAEYTCEVFGYCRELEFSLPYLLLPYVLLSVNLVFFTLTCAANPGTITKANESFLLQVYKFDDVMFPKNSRCPTCDLRKPARSKHCRLCDRCVHRFDHHCVWVNNCIGAWNTRYFLIYLLTLTASAATIATVTAAFLLRLVTVSDLYQETYLDDVGHFQAVDTVFLIQHLFLAFPRIVFLLGFVIVLSMLLAGYLCFALYLAATNQTTNEWYKGDWAWCQRWPLVAWSPSAEPRIHQNIHSHGFRSNLREIFLPATPSYKKKEK

Annotated regions:
phrase: NSRCPTCDLRKPARSKHCRLCDRCVHRFDHHCVWVNNCIGAWNTRYFLIYLLTLTASAATIATVTAAFLLRLVTVSDLYQETYLDDVGHFQAVDTVFLIQHLFLAFPRIVFLLGFVIVLSMLLAGYLCFALYLAATNQTTNEWY
type: DOMAIN
name: Palmitoyltrfase_DHHC
description: Palmitoyltransferase, DHHC domain
Protein sequence:
MERAREIGEGSASSLREQRNLREKERRMRMKHLFSILSSHVSPTRRLPVPQLIDQAVSYMIQLKEKVNYLNEMKRRMLGGEVKNRSEGSSLLPKLSIRSLDSIIEMNLVMDLNMKGVMLHKLVSVFEEEGAQVMSANLQNLNDRTFYTIIAQAIICRIGIDPSRIEERLRDIIS

Annotated regions:
phrase: SLREQRNLREKERRMRMKHLFSILSSHVSPTRRLPVPQLIDQAVSYMIQ
type: DOMAIN
name: bHLH_dom
description: Myc-type, basic helix-loop-helix (bHLH) domain

phrase: NLREKERRMRMKHLFSILSSHVSPTRRLPVPQLIDQAVSYMIQLKEKVN
type: DOMAIN
name: bHLH_dom
description: Myc-type, basic helix-loop-helix (bHLH) domain

phrase: REQRNLREKERRMRMKHLFSILSSHVSPTRRLPVPQLIDQAVSYMIQL
type: DOMAIN
name: bHLH_dom
description: Myc-type, basic helix-loop-helix (bHLH) domain
Protein sequence:
MSTNPKPQRQTXRNNNRRPQDVKFPGGGQIVGGVYLLPRRGPRLGVRATRKTSERSQPRGRRQPIPKARRSEGRSWAQPGYPWPLYGNEGCGWAGWLLSPRGSRPNWGPTDPRRRSRNLGKVIDTLTCGFADLMGYIPVLGAPLGGVARVLAHGVRVLEDGVNYATGNIPGCSFSIFLLALLSCLTVPASAYEVRNSSGIYHVTNDCPNSSIVYEMENAILHLPGCVPCVREGNHSRCWTPLTPTVASANASFPVQSFRRHVDLMVGAATLCSALYVGDLCGSVFLAAQLITFSPRRHITVQDCNCSIYSGHVTGHRMAWDMMMNWSPTGALVVAQLLRIPQAIVDMVAGAHWGVLAGLAYYSMAGNWAKAVIVLLLFSGVDATTQVTGGETAKHTSXLVXFFSLGPQQKLELVNTNGSWHINRTALNCNDSLNTGFIAALXYTHXFNSSGCPERMSSCRPITTYSQGWGTITYDGRPASXQRPYCWHYAPPLCGIVDARTVCGPVYCFTPSPVVVGTTDQRGVPTYNWGENETDVFLLNNTRPPTGNWFGCTWMNGTGFTKTCGAPPCNINGEPNNTLLCPTDCFRKHPEATYTKCGSGPWLTPRCLVDYPYRLWHYPCTVNYTIFKVRMYVGGIEHRLSVACNWTRGERCDLEDRDRSELSPLLLSTTQWQVLPCSFTTMPALSTGLIHLHQNIVDVQYLYGIGSVVVSWALKWEYVVLLFLLLADARVCACLWMMLLISQAEAALENLVVLNAAALCGVHGVPAF

Annotated regions:
phrase: QVTGGETAKHTSXLVXFFSLGPQQKLELVNTNGSWHINRTALNCNDSLNTGFIAALXYTHXFNSSGCPERMSSCRPITTYSQGWGTITYDGRPASXQRPYCWHYAPPLCGIVDARTVCGPVYCFTPSPVVVGTTDQRGVPTYNWGENETDVFLLNNTRPPTGNWFGCTWMNGTGFTKTCGAPPCNINGEPNNTLLCPTDCFRKHPEATYTKCGSGPWLTPRCLVDYPYRLWHYPCTVNYTIFKVRMYVGGIEHRLSVACNWTRGERCDLEDRDRSELSPLLLSTTQWQVLPCSFTTMPALSTGLIHLHQNIVDVQYLYGIGSVVVSWALKWEYVVLLFLLLAD
type: DOMAIN
name: HCV_NS1
description: Hepatitis C virus, Non-structural protein E2/NS1

phrase: STNPKPQRQTXRNNNRRPQDVKFPGGGQIVGGVYLLPRRGPRLGVRATRKTSERSQPRGRRQPIPKARRSEGRSWAQPGYPWPLYGNEGCGWAGWLLSPRGSRPNWGPTDPRR
type: DOMAIN
name: HCV_core_N
description: Hepatitis C virus, Core protein, N-terminal

phrase: SRNLGKVIDTLTCGFADLMGYIPVLGAPLGGVARVLAHGVRVLEDGVNYATGNIPGCSFSIFLLALLSCLTVPA
type: DOMAIN
name: HCV_Core_C
description: Hepatitis C virus, Core protein, C-terminal

phrase: EVRNSSGIYHVTNDCPNSSIVYEMENAILHLPGCVPCVREGNHSRCWTPLTPTVASANASFPVQSFRRHVDLMVGAATLCSALYVGDLCGSVFLAAQLITFSPRRHITVQDCNCSIYSGHVTGHRMAWDMMMNWSPTGALVVAQLLRIPQAIVDMVAGAHWGVLAGLAYYSMAGNWAKAVIVLLLFSGV
type: DOMAIN
name: HCV_Env
description: Hepatitis C virus, Envelope glycoprotein E1
Protein sequence:
MAGQISPTRSALLASKASLKTANGGADLLKRKRDALIGEFFALVKDALAAREQLSSVSKGAYTSLFGAKAWDSPEAVESLSLAGTGDYAVDMQIESIYGVKVPKINIPERAAQADFSPINVGARTIQASNDFGGVLEAIVKVAATETKLRRIGEEIKKTSRRVNALEQVVIPGIHDDIRFIRSVLDQREREAGYTQKKIKAKIEGKNKEAREAAAATSHGSAAD

Annotated regions:
Protein sequence:
MVPSEPIPTQTVNSLSTDEIDGKKSVTYLVDDRRQNLRLRRTKSVARAEEITKEAEKVRKSQPDKPCHKPRDSLFSWSSEFRDFTGLVNWGFLLLFMGGLRLSLENLLKYGIRIDPIQWIIVLNGGTAEFSIENPSVYLFIYINVHILFTLWVEKLLAKERIRWNQALLLHICNLSLIIMIPVISSWTLKNKFGLVGLTLLCTVYTITFLKLWSYIHVNYWCRLVRSKSQQHRRRAFSVAQPYPPDVDNGKSMNEVVSYPNNLTVHDLYFFMAVPTLCYELNFPRTSRIRKRFLIKRVIEVLVGMQVVLGLFQQWIIPSVKNSLETFSKMEPVPATERLLKLAIPNHLLWLIWFYLCFHSYFNMLGEVLKFADRDFYGDWWNATNIDVFWRSWNMPIHRWAVRHLYMPLIERGYGKTVGSVSVFLLSAFFHEYLVSVPLRMFNLWAFSGMMLQIPLSAVSHFVEKKAGPRLGNVLVWMSLILGQPLCIMMYYHDYVITHFGKDLMEQFSKMR

Annotated regions:
Protein sequence:
MLDPRLFRTQLEETARQLGRRGFVLDTAAFGALEERRKALQVETQNLQNERNSRSRSIGQAKARGEDIEPLLAAVQGLGERLKENEAELASIQERMEALLLGVPNLLDTDVPEGRSEADNVEIRRWGEPPQFDFEPKDHVDLAVGLGCADFEAAAKLSGSRFVVLTGPLARLQRALTQFMLDIHTGEHGYIETYVPFLVNADSLRGTGQLPKFEEDLFKVQHEPVFYLIPTAEVPVTNLVRDEIVEEERLPLKYVCHTPCFRSEAGSYGRDVRGLIRQHQFEKVELVQIVRPEDSREAHEALTRHAEVILERLGLPYRRVLLCAGDTGFSSAKTYDLEVWLPGQQSYREISSCSNFRDFQARRLQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLENCQDEAGRIRVPEVLVPYMGGVNLIGPAA

Annotated regions:
phrase: RLQRALTQFMLDIHTGEHGYIETYVPFLVNADSLRGTGQLPKFEEDLFKVQHEPVFYLIPTAEVPVTNLVRDEIVEEERLPLKYVCHTPCFRSEAGSYGRDVRGLIRQHQFEKVELVQIVRPEDSREAHEALTRHAEVILERLGLPYRRVLLCAGDTGFSSAKTYDLEVWLPGQQSYREISSCSNFRDFQARRLQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLENCQDEAGRIRV
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: QHEPVFYLIPTAEVPVTNLVRDEIVEEERLPLKYVCHTPCFRSEAGSYGRDVRGLIRQHQFEKVELVQIVRPEDSREAHEALTRHAEVILERLGLPYRRVLLCAGDTGFSSAKTYDLEVWLPGQQSYREISSCSNFRDFQARRLQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLE
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: DNVEIRRWGEPPQFDFEPKDHVDLAVGLGCADFEAAAKLSGSRFVVLTGPLARLQRALTQFMLDIHTGEHGYIETYVPFLVNADSLRGTGQLPKFEEDLFKVQHEPVFYLIPTAEVPVTNLVRDEIVEEERLPLKYVCHTPCFRSEAGSYGRDVRGLIRQHQFEKVELVQIVRPEDSREAHEALTRHAEVILERLGLPYRRVLLCAGDTGFSSAKTYDLEVWLPGQQSYREISSCSNFRDFQARRLQARWRNPETGKPELVHTLNGSGLAVGRTLVAVLENCQDEAGRIRVPEVLVPY
type: DOMAIN
name: SerRS_core
description: Serine-tRNA ligase catalytic core domain

phrase: MLDPRLFRTQLEETARQLGRRGFVLDTAAFGALEERRKALQVETQNLQNERNSRSRSIGQAKARGEDIEPLLAAVQGLGERLKENEAELASIQERMEALLLGVPN
type: DOMAIN
name: Ser-tRNA-synth_1_N
description: Serine-tRNA synthetase, type1, N-terminal
Protein sequence:
MPELPEVETIRRNLNTVLEGEIIREVLVYYRPIVSNDASFETKLKGQRIHKVEREAKYLKFILDDYLLVSHLRMEGKYFMDAPLNKHIHVVFNLSSGHTLSYEDTRKFGRFELVDIKYKDTYLKDIKGLAKDPDTLDLNTFYSSFNQRSKTIKEILLDQSIIGGIGNIYANEILYLSKIHPAKKGFLISKDEAKTLLNNSNLVLNKAIEMGGTTIDTFESLGHKGEFQQELNVHGKTGEICKVCGTKIIKFQLKGRGTYICPKCQPSYVVAITGGIATGKSTATNYLRKKGFVVVDSDEIVGSLYQDSDVLNLIAKTFKMETPIDKAKLANIVFHDEKQRKKLEHILHPLVFDEISKQKQLNNEHILFLDIPLLFESNYKEFDESILIDTTEALQLDRLMKRNKYTQEEALVRIKAQIPLSKKRKLATHIIKNNGSIDALYEKIDKLLERYV

Annotated regions:
phrase: CKVCGTKIIKFQLKGRGTYICPKC
type: BINDING_SITE
name: DNA_glyclase_Znf_dom_DNA_BS
description: DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site

phrase: AKDPDTLDLNTFYSSFNQRSKTIKEILLDQSIIGGIGNIYANEILYLSKIHPAKKGFLISKDEAKTLLNNSNLVLNKAIEMGGTTIDT
type: DOMAIN
name: DNA_glyclase/AP_lyase_DNA-bd
description: DNA glycosylase/AP lyase, H2TH DNA-binding

phrase: LAKDPDTLDLNTFYSSFNQRSKTIKEILLDQSIIGGIGNIYANEILYLSKIHPAKKGFLISKDEAKTLLNNSNLVLNKAIEMGGTTIDTF
type: DOMAIN
name: DNA_glyclase/AP_lyase_DNA-bd
description: DNA glycosylase/AP lyase, H2TH DNA-binding

phrase: NVHGKTGEICKVCGTKIIKFQLKGRGTYICPKCQ
type: DOMAIN
name: Znf_DNA_glyclase/AP_lyase
description: Zinc finger, DNA glycosylase/AP lyase-type

phrase: GEICKVCGTKIIKFQLKGRGTYICPKCQ
type: DOMAIN
name: Znf_FPG/IleRS
description: Zinc finger, FPG/IleRS-type

phrase: PELPEVETIRRNLNTVLEGEIIREVLVYYRPIVSNDASFETKLKGQRIHKVEREAKYLKFILDDYLLVSHLRMEGKYFMDAPLNKHIHVVFNLSSGHTLSYEDTRKFGRF
type: DOMAIN
name: FPG_cat
description: Formamidopyrimidine-DNA glycosylase, catalytic domain

phrase: PELPEVETIRRNLNTVLEGEIIREVLVYYRPIVSNDASFETKLKGQRIHKVEREAKYLKFILDDYLLVSHLRMEGKYFMDAPLNKHIHVVFNLSSGHTLSYEDTRKF
type: DOMAIN
name: FPG_cat
description: Formamidopyrimidine-DNA glycosylase, catalytic domain

phrase: MPELPEVETIRRNLNTVLEGEIIREVLVYYRPIVSNDASFETKLKGQRIHKVEREAKYLKFILDDYLLVSHLRMEGKYFMDAPLNKHIHVVFNLSSGHTLSYEDTRKFGR
type: DOMAIN
name: FPG_cat
description: Formamidopyrimidine-DNA glycosylase, catalytic domain
Protein sequence:
MENRWQVMIVWQVDRMRIRTWNSLVKHHMYVSKRAKGWLYRHHYESRHPKVSSEVHIPLGEAKLVIKTYWGLQTGERDWHLGHGASVEWRLGNYGTQIDPDLADQLIHLHHFDCFADSAIRKAILGHIVIPRCDYQAGHNNKVGSLQYLALTALIKPKKIKPPLPSIKKLVEDRWNKPQRIKGHRGNHTMNGH

Annotated regions:
Protein sequence:
MRLDTLLETVGLESIAPQEVTGFAIDHRKVAPGTVFGAFKGARFNGEDYIPAAIAAGAIAVVTCAGVEVDGAVAVIADEPRRTFALLAAKFFAPFPRTTVAVTGTNGKTSTVELTRQLWRMAGHHAASIGTLGVTTGDETVTTGLTTPDIVTFLSNMAGLAREGVTHAAFEASSHGLHQYRTEGLPVAAAGFTNLSRDHLDYHGDMAAYLTAKLRLFSEVVDPNGIAVIWQDDEASDRVIDLARERGLQLMGIGTRGATLRLISRIPTQLGQTLTVVHEDVEHKIMLPLIGAYQAANALMAAGLVIATGGNPMTTLANLSRLQPVRGRLERAVITRAGAPVYVDYAHTPDALAAAISALKPHAVGRLILVMGAGGDRDAGKRPEMGLIAEAMADRVIVTDDNPRSEDPEAIRHAIMSKAPEATEIGDRRRAIAAAIAEAGPGDIVLIAGKGHETGQVVGAGDDQRILPFDDVQVARDCAA

Annotated regions:
phrase: VTGFAIDHRKVAPGTVFGAFKGARFNGEDYIPAAIAAGAIAVVTCAGVEVDGA
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: VTGTNGKTSTVELTRQLWRMAGHHAASIGTLGVTTGDETVTTGLTTPDIVTFLSNMAGLAREGVTHAAFEASSHGLHQYRTEGLPVAAAGFTNLSRDHLDYHGDMAAYLTAKLRLFSEVVDPNGIAVIWQDDEASDRVIDLARERGLQLMGIGTRGATLRLISRIPTQLGQTLTVVHEDVEHKIMLPLIGAYQAANALMAAG
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRLERAVITRAGAPVYVDYAHTPDALAAAISALKPHAVGRLILVMGAGGDRDAGKRPEMGLIAEAMADRVIVTDDNPRSEDPEAIRHAIMSKAPEATEIGDRRRAIAAAIAEAGPGDIVLIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MEYKFSTVVDPGTYETHGLCEGYEVRYHKNAELEDIGCLRCQEHWRQSVGPLGAFKGTLGNPFNLLSLVIPECLPDRLSIVGFANELAFIHDDVTDIVQYGDAHNNDFKEAFNSMATTGSMENAASGKRALQAYIAREMVRIDKERAIPTIKAWAKFVDYGGRQETTRFTSEKEYTEYRIQDIGLWFWYGLLSFAMALDVPEHEREMCHEVCRTAYVQIMLVHDLASWEKEKLNAAALGKDVITNIIFVLMEEHGISEEEAKERCRETAKTLAADYLKIVEEYKARDDISLDSRKYIESWLYTISGNTVWSFICPRYNSSGSFSDHQLELMKNGVPKDPASGSTNGTSNGTSNGTSHVAVNGNGHVTNDDLSANGIKTDGELLSAITMEHLKNRNSFKLGDHDQEVKSLHGHGQALDPRVLQAPYEYITALPSKGLREQAIDALNVWFRVPTAKLEIIKSITTILHNASLMLDDVEDGSELRRGKPATHNIFGLGQTINSANYQLVRALQELQKLGDARSLLVFTEELHNLYVGQSMDLYWTSNLVCPSMHEYFQMIEHKTGGLFRLFGRLMAVHSTNPVQVDLTDFTNHLGRYFQTRDDYQNLVSAEYTKQKGFCEDFEEGKFSLPMIHLMQTMPDNLVLRNVWTQRRVNGTATHGQKQTILNLMKEAGTLKFTQDSLGVLYSDVEKSVAELESKFGIENFQLRLIMELLKTG

Annotated regions:
phrase: LMLDDVEDGSELRR
type: CONSERVED_SITE
name: Polyprenyl_synt_CS
description: Polyprenyl synthetase, conserved site
Protein sequence:
MPVITFDYDDLKELGIDIDREKLLDVLPMMGSDIEDFDDESIKVEFFPNRPDLLSVEGVARSLRGFLGIEKGMPSYDVHDSGVEVTVDESVLDVRPYLGMAVIEDVQFTDKKLKQVMEFQEDLHWVIGRDRRKVAIGIHDLDRVEPPFLYSGVEPEGVTFTPLDSVCEMTPHEILEEHPKGVSYAHLLRDHDRYPLITDKNGDVLSMPPIINGELTKLTVNTRRILVDVTGTDDRAVRQTLNIICTSFAEAGGRIGSVRVKRPDGELHLPDLTPREMRVSVSEASRITGLELSADEVMDLLMKARMDARRTSDDEVVAVIPAYRVDILHEVDLVENIAVQHCIGRIEPELPDIATIAEEDTWSRADASIREVMVGLGFQEVMSLMLTSEESHYRRMRLEEDERVEVAQPISQDRTMIRKSLLNGLLEFFEDNKHEDLPQKIFEVGDVVYINPESETRSRVVTKLACAVTHSSAGFTEIKSLAAAVVENLGYEFRIEPLEHPSFIEGRCAAIESEGKSSAIGGFFGEVHPEVVTNFNLEYPVIALEIEFK

Annotated regions:
phrase: MRVSVSEASRITGLELSADEVMDLLMKARMDARRTSDDEVVAVIPAYRVDILHEVDLVENIA
type: DOMAIN
name: tRNA_synthase_B5-dom
description: tRNA synthetase, B5-domain

phrase: VRPYLGMAVIEDVQFTDKKLKQVMEFQEDLHWVIGRDRRKVAIGIHDLDRVEPPFLYSGVEPEGVTFTPLDSVCEMTPHEILEEHPKGVSYAHLLRDHDRYPLITDKNGDVLSMPPIINGELTKLTVNTRRILVDVTGTDDRAVRQTLNIICTSFAEAG
type: DOMAIN
name: B3/B4_tRNA-bd
description: B3/B4 tRNA-binding domain

phrase: SIREVMVGLGFQEVMSLMLTSEESHYRRMRLEEDERVEVAQPISQDRTMIRKSLLNGLLEFFEDNKHEDLPQKIFEVGDVVYINPESETRSRVVTKLACAVTHSSAGFTEIKSLAAAVVENLGYEFRIEPLEHPSFIEGRCAAIESEGKSSAIGGFFGEVHPEVVTNFNLEYPVIALEIE
type: DOMAIN
name: PheRS_beta_core
description: Phenylalanyl tRNA synthetase beta chain, core domain

phrase: VAIGIHDLDRVEPPFLYSGVEPEGVTFTPLDSVCEMTPHEILEEHPKGVSYAHLLRDHDRYPLITDKNGDVLSMPPIINGELTKLTVNTRRILVDVTGTDDRAVRQT
type: DOMAIN
name: B3/B4_tRNA-bd
description: B3/B4 tRNA-binding domain

phrase: IEPELPDIATIAEEDTWSRADASIREVMVGLGFQEVMSLMLTSEESHYRRMRLEEDERVEVAQPISQDRTMIRKSLLNGLLEFFEDNKHEDLPQKIFEVGDVVYINPESETRSRVVTKLACAVTHSSAGFTEIKSLAAAVVENLGYEFRIEPLEHPSFIEGRCAAIESEGKSSAIGGFFGEVHPEVVTNFNLEYPVIALEIE
type: DOMAIN
name: PheRS_beta_core
description: Phenylalanyl tRNA synthetase beta chain, core domain

phrase: LTPREMRVSVSEASRITGLELSADEVMDLLMKARMDARRTSDDEVVAVIPAYRVDILHEVDLVENIAVQHCIGRIE
type: DOMAIN
name: tRNA_synthase_B5-dom
description: tRNA synthetase, B5-domain

phrase: PREMRVSVSEASRITGLELSADEVMDLLMKARMDARRTSDDEVVAVIPAYRVDILHEVDLVENIAVQHC
type: DOMAIN
name: tRNA_synthase_B5-dom
description: tRNA synthetase, B5-domain
Protein sequence:
MAILFKEVCDIFYKIESTTKRLEKMEYFIELIKMVENKKAPQDLKKICQIAVGRVFAEHENKELGIGPNILIDAIISTGINKKTIQNTINQTGDIGTALEQLGHNIKQTSLFQTPPTLEEVYTTLKKLSTIEGGQSQKKKIRHISSILIKSSPIEQRYLARLILEDMRIGMSIPTILGAFSKYYNQPKENLEKIYAVVNDIGLLAEKLAQRCDIYNDEELQLKIFRPIKPMLAQLIGSINDAIIEMGAPQFETKYDGARVQIHKKDNIVKIYSRKLEDITNSIPEIVEEVKNIEAQNLIIEGECVAMDKNGRPRPFQDILRRFRRKYNIDSIQSEINLKVYVFDILYYNNKSLIELPLIERRSILEKILTNKHNKLNISHKLTTDNEQKAREFYEWSLSIGHEGVMIKNPNAIYTPGSRVRTMYKFKPTLESLDVVITKAKMGMGKRKEWYGSFEIAVKDYENNLYTIGHVGSGLTEEELHNLTEQIKNITIEVINDEAIVEPKIVLEISYEEIQESDKYKCGYALRFPRVARIRTDKSIEDINSIEDIERIFDIQKGKGNL

Annotated regions:
phrase: EGVMIKNPNAIYTPGSRVRTMYKF
type: CONSERVED_SITE
name: DNA_ligase_ATP-dep_CS
description: DNA ligase, ATP-dependent, conserved site

phrase: ETKYDGAR
type: CONSERVED_SITE
name: DNA_ligase_ATP-dep_CS
description: DNA ligase, ATP-dependent, conserved site

phrase: RKEWYGSFEIAVKDYENNLYTIGHVGSGLTEEELHNLTEQIKNITIEVINDEAIVEPKIVLEISYEEIQESDKYKCGYALRFPRVARIRTD
type: DOMAIN
name: DNA_ligase_ATP-dep_C
description: DNA ligase, ATP-dependent, C-terminal

phrase: SIQSEINLKVYVFDILYYNNKSLIELPLIERRSILEKILTNKHNKLNISHKLTTDNEQKAREFYEWSLSIGHEGVMIKNPNAIYTPGSRVRTMYKFKPTLESLDVVITKAKMGMGKRKEWYGSFEIAVK
type: DOMAIN
name: DNA_ligase_ATP-dep_cent
description: DNA ligase, ATP-dependent, central

phrase: FKEVCDIFYKIESTTKRLEKMEYFIELIKMVENKKAPQDLKKICQIAVGRVFAEHENKELGIGPNILIDAIISTGINKKTIQNTINQTGDIGTALEQLGHNIKQTSLFQTPPTLEEVYTTLKKLSTIEGGQSQKKKIRHISSILIKSSPIEQRYLARLILEDMRIGMSIPTILGA
type: DOMAIN
name: DNA_ligase_ATP-dep_N
description: DNA ligase, ATP-dependent, N-terminal

phrase: PMLAQLIGSINDAIIEMGAPQFETKYDGARVQIHKKDNIVKIYSRKLEDITNSIPEIVEEVKNIEAQNLIIEGECVAMDKNGRPRPFQDILRRFRRKYNIDSIQSEINLKVYVFDILYYNNKSLIELPLIERRSILEKILTNKHNKLNISHKLTTDNEQKAREFYEWSLSIGHEGVMIKNPNAIYTPGSRVRTMYKF
type: DOMAIN
name: DNA_ligase_ATP-dep_cent
description: DNA ligase, ATP-dependent, central
Protein sequence:
MDAVTPDAARIAAAINTKPSREEAEAAVRTLISWAGDDPTREGLLDTPKRVVKAYEEWFSGYDADPLKALGKTFEDVQGYDDMVMLTNIDVESHCEHHLAPIMGVAHVAYLPSKAVVGISKIARVVEIFSKRMQTQETMTAQIADALTEAMEPRGVAVLVDAKHQCMTTRGVHHPNVSTITTTFTGEFRNDRDLKDRFMRLLERA

Annotated regions:
phrase: EAAVRTLISWAGDDPTREGLLDTPKRVVKAYEEWFSGYDADPLKALGKTFEDVQGYDDMVMLTNIDVESHCEHHLAPIMGVAHVAYLPSKAVVGISKIARVVEIFSKRMQTQETMTAQIADALTEAMEPRGVAVLVDAKHQCMTTRGVHHPNVSTITTTFTGEFRNDRDLKDRFMRL
type: DOMAIN
name: GTP_CycHdrlase_I_dom
description: GTP cyclohydrolase I domain
Protein sequence:
MSINFQEIIAKLHQFWSDRGCLIAQPYDTEKGAGTMSPHTFLRAIGPEPWSVAYVEPCRRPTDGRYGENPNRFQHYFQYQVLIKPSPDNIQDIYLDSLRVLGIHPEDHDIRFVEDNWESPTLGAWGVGWEVWLDGMEITQFTYFQQCGGIDCRPVSIEITYGLERLAMYLQDVEAITKIQWNNRVNYGEIFLQNEIEQCTYNFEASDPDLLLKLFNLYEQETKQLIEKGLVLPSLDYVLKCSHSFNLLDARGVIAVAERTRYIGRIRNLAREVAQLYLQQRETLGFPLCK

Annotated regions:
Protein sequence:
MRLLPRLLLLLLLVFPATVLFRGGPRGLLAVAQDLTEDEETVEDSIIEDEDDEAEVEEDEPTDLVEDKEEEDVSGEPEASPSADTTILFVKGEDFPANNIVKFLVGFTNKGTEDFIVESLDASFRYPQDYQFYIQNFTALPLNTVVPPQRQATFEYSFIPAEPMGGRPFGLVINLNYKDLNGNVFQDAVFNQTVTVIEREDGLDGETIFMYMFLAGLGLLVIVGLHQLLESRKRKRPIQKVEMGTSSQNDVDMSWIPQETLNQINKASPRRLPRKRAQKRSVGSDE

Annotated regions:
Protein sequence:
NMLAHLEDGALNGDTLTPDRKHLLEAQRNRAHSPEMPMHLGPQFVYQWQSNQNAAMSAMPNLQSRLSSLSHISLNLDHPEGRSGSASGSAANLAGSNTHASSVREYRCEYCGKQFGMSWNLKTHLRVHTGEKPFACRLCVAMFKQKAHLLKHLCSVHRNVITTTNGADTENRYSCCFCSMCFESVQELVRHLSGHHNNLLLTKNL

Annotated regions:
phrase: CEYCGKQFGMSWNLKTHLRV
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: YRCEYCGKQFGMSWNLKTHLRV
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: FACRLCVAMFKQKAHLLKHLCSV
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: YSCCFCSMCFESVQELVRHLSGH
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: YRCEYCGKQFGMSWNLKTHLRVHTGEK
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: YRCEYCGKQFGMSWNLKTHLRV
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: CRLCVAMFKQKAHLLKHLCSV
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: FACRLCVAMFKQKAHLLKHLCSV
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type
Protein sequence:
MALLKLEDGTIYNQLADISRELSSLNIQLNYWSVGEDSQLRQLLAQESLNSEEKEEVLVALDRYFEQLEQTSGYQSRDLIALHPGIPNLDEMLTKFDRIHTHADDEVRYIVDGEAIFGFVRPDGSQVELTVQPEEYINVPAGTEHWFYLTPARRVKAVRYFIDTTGWVPQYTGKEIRFRQSAIA

Annotated regions:
Protein sequence:
MNMQILWIIIAIICSYLIGAIPFGYIIPKLFKGIDIREHGSKNVGSTNVLRVLGAKYGIPTFLLDCFKGALPIIIIRYMLGMPELFLISDTYDISIVFGAAAAIGHIKSIYIGFKGGKAVATGVGAVIAINPIIGLSGIGLFFIVAFSTKYVSIGSVVASFSVAVMMWIGVLIKEIWIPVPNLTISYESQIINLVAISLIVLLIIYMHKKNFIRLMNGTENKIGQKKIQNITK

Annotated regions:
Protein sequence:
MWNKWAEVSRMNLKNNVELIRQKLPDLEPIAVVKDDAYGHDAAVVVPELLKNGITKFAVVYAKDALMLSEFGAEWILVLDDPPLSNMCSEYEKRGIRFCITDSKWLSDGLLELPIKFHLFVDVGMHREGVPWYETNTIREICKVVGNRLEGICSHLSNGLSDSQALATEEERFREVLSIAPEGLMVHLSNSASLYNAKFPYATHFRPGISLYGYGYPGLKPVLSLKARVIHEHILEPGEGLSYGWTWRATEPTHVVTVPVGYGDGYNRKLSNKAIAGSKAGNLQQIGTVTMDFTMFEAPKNVTVGDEIVLMGEWEGGHFWADEMAQLVGTIPYEVLTSINPRVPRVLV

Annotated regions:
phrase: AVVKDDAYGH
type: BINDING_SITE
name: Ala_racemase_pyridoxalP-BS
description: Alanine racemase, pyridoxal-phosphate attachment site

phrase: VLSLKARVIHEHILEPGEGLSYGWTWRATEPTHVVTVPVGYGDGYNRKLSNKAIAGSKAGNLQQIGTVTMDFTMFEAPKNVTVGDEIVLMGEWEGGHFWADEMAQLVGTIPYEVLTSINPRVPR
type: DOMAIN
name: Ala_racemase_C
description: Alanine racemase, C-terminal

phrase: VLSLKARVIHEHILEPGEGLSYGWTWRATEPTHVVTVPVGYGDGYNRKLSNKAIAGSKAGNLQQIGTVTMDFTMFEAPKNVTVGDEIVLMGEWEGGHFWADEMAQLVGTIPYEVLTSINPRVPRVL
type: DOMAIN
name: Ala_racemase_C
description: Alanine racemase, C-terminal

phrase: RMNLKNNVELIRQKLPDLEPIAVVKDDAYGHDAAVVVPELLKNGITKFAVVYAKDALMLSEFGAEWILVLDDPPLSNMCSEYEKRGIRFCITDSKWLSDGLLELPIKFHLFVDVGMHREGVPWYETNTIREICKVVGNRLEGICSHLSNGLSDSQALATEEERFREVLSIAPEGLMVHLSNSASLYNAKFPYATHFRPGISLYG
type: DOMAIN
name: Ala_racemase_N
description: Alanine racemase, N-terminal
Protein sequence:
MKQLTGACIIGQSGGPTAVINASAQGVIQTALKADCITHVLGAAHGIKGVLEDKLYDMGQEDSGELDLLKFTPSSALGSCRYKLADPDVDDADYRRILEIFKKYDVRYFFYNGGNDSMDTCNKISKYMQKVGYECRIMGVPKTIDNDLNGTDHCPGFASAAKYIATSCAEVWQDAHVYDTGMVTIIEIMGRHAGWLAGSAALASLTGCGPDLVYLPETDFDMERFLADVKAVYDQSGNCLVAVSEGIHYADGTFVSEAKTSATDGFGHAQLGGLASHLASAVKEAFGVKVRGIELSLLQRCGAHLDSETDAEEALLAGSAAVQAAVEGFTDKMVAFRCTRGEDGYRCETILEPLDIVANFEKKVPREWINEAGNGVNQQFIDYVLPLIQGDAKAPRVNGLPRFARLKKVLTTQL

Annotated regions:
phrase: CIIGQSGGPTAVINASAQGVIQTALKADCITHVLGAAHGIKGVLEDKLYDMGQEDSGELDLLKFTPSSALGSCRYKLADPDVDDADYRRILEIFKKYDVRYFFYNGGNDSMDTCNKISKYMQKVGYECRIMGVPKTIDNDLNGTDHCPGFASAAKYIATSCAEVWQDAHVYDTGMVTIIEIMGRHAGWLAGSAALASLTGCGPDLVYLPETDFDMERFLADVKAVYDQSGNCLVAVSEGIHYADGTFVSEAKTSATDGFGHAQLGGLASHLASAVKEAFGVK
type: DOMAIN
name: Phosphofructokinase_dom
description: Phosphofructokinase domain
Protein sequence:
MIIVAVTVVDSFIGNKTDKSEITYTNFLTQVQQKKVDSVQITADHSITGQLKDGSSFTTYAPTDAALMPALKDSDVNVVAKPPEQPSWWMSALASIVPVLILVVVFFFFMQQTQGGGSRVMNFGKSHAKMHGEGKVKVSFKDVAGADEAKEELSEIVEFLRNPAKYNAIGAKIPKGVLLFGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFAQAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGANEGIITIAATNRPDILDPALLRPGRFDRQITVDRPDLRGRVAILNVHAKGKPLSKDVDLKTIAKKTPGFTGADLSNLLNEAALLAARADKKIITMAELEEASEKVAFGPERRSHVISEKEKRLTAVHESGHALVAYLLPEADPVHKVTIIPRGRAGGYTMMLPDEDRSYETKSYYLAQIRVALGGRAAEQIVFNEISSGASGDLQNVTHIVRQMITRLGMSPKLGPMVFGEQQDQVFLGKSLGHERNYGEGVAELIDKEMHDLVTTAYDDVIRMLEEHRDALNHMAAALMEVETINHKQVENLIKYGALESPEERAEKKKNEAQKAEQVETTETVAETVVTDKEETHISPWGNDLSVSSTEETTATEEKPDKE

Annotated regions:
phrase: IPKGVLLFGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFAQAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGANEGIITIAATNRPDILDPALLRPGRFDRQITVDRP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VISEKEKRLTAVHESGHALVAYLLPEADPVHKVTIIPRGRAGGYTMMLPDEDRSYETKSYYLAQIRVALGGRAAEQIVFNEISSGASGDLQNVTHIVRQMITRLGMSPKLGPMVFGEQQDQVFLGKSLGHERNYGEGVAELIDKEMHDLVTTAYDDVIRMLEEHRDALNHMAAALMEVETINHKQVEN
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: DVDLKTIAKKTPGFTGADLSNLLNEAALLAARADKKIITMAELE
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: VLLFGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFAQAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGANEGIITIAATNRPDILDPALLRPGRFDRQITV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: IITIAATNRPDILDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: IIVAVTVVDSFIGNKTDKSEITYTNFLTQVQQKKVDSVQITADHSITGQLKDGSSFTTYAPTDAALMPALKDSDVNVVAKP
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular