nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MKTERILGALYGQALGDAMGMPSELWPRSRVKAHFGWIDRFLPGPKENNAACYFNRAEFTDDTSMALCLADALLEREGKIDPDLIGRNILDWALRFDAFNKNVLGPTSKIALNAIRDGKPVAELENNGVTNGAAMRVSPLGCLLPARDVDSFIDDVALASSPTHKSDLAVAGAVVIAWAISRAIDGESWSAIVDSLPSIARHAQQKRITTFSASLAARLEIALKIVRNADGTESASEQLYQVVGAGTSTIESVPCAIALVELAQTDPNRCAVLCANLGGDTDTIGAMATAICGALHGVNAIDPALKAELDAVNQLDFNRYATALAKYRQQREAV

Annotated regions:
Protein sequence:
VRDGYIMIKDTNCKFSCNIFKKWEYCSPLCQSKGAETGYCYNFGCWCLDLPDDVPVYGDRGVICRTR

Annotated regions:
phrase: RDGYIMIKDTNCKFSCNIFKKWEYCSPLCQSKGAETGYCYNFGCWCLDLPDDVPVYGDRGVIC
type: DOMAIN
name: LCN-type_CS_alpha_beta_dom
description: LCN-type cysteine-stabilized alpha/beta (CS-alpha/beta) domain

phrase: VRDGYIMIKDTNCKFSCNIFKKWEYCSPLCQSKGAETGYCYNFGCWCLDL
type: DOMAIN
name: Scorpion_toxin-like
description: Knottin, scorpion toxin-like
Protein sequence:
MVSAAASAGRLGSALPFLLVLLDLQYQGAECGINAEVEKQLEMGKKLLAAGQLADALSHFHAAIEGDSDNYIAYYRRATVYLAMGKSKAAIRDLSKVVELKQDFTSRLQRGHLLLKQGKFDEAEDDFKNVLKSNPSNNEEKEAQTQLTKSDELQRLYSQALSAYRQEDYEAAIPLLDEILAVCVWDAELRELRAECYIKEGEPSKAISDLKAAAKLKSDNTEAFYKISRIYYQLGDHELSLSEVRECLKLDQDHKQCFSLYKQVKKLNKQIESAEEFIREGRYEDAISKYDSVMKTEPDVPVYATRAKERICHCLSKNQQATEAITVCTQVLQLEPTNVNALKDRAEAYLLEDLYEEAIKDYETAQANSENDQQIREGLERAQRMLKQSQKRDYYKILGVKRNARKQEIIKAYRKLASQWHPDNFQSEEEKKKAEKKFIDIAAAKEVLTDPEMRRKFDAGEDPLDAESQQGGGNPFHRNWNTWQGFNPFGSGGGPFTFKFHFS

Annotated regions:
phrase: TEAFYKISRIYYQLGDHELSLSEVRECLKLDQD
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: AELRELRAECYIKEGEPSKAISDLKAAAKLKSD
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: VEKQLEMGKKLLAAGQLADALSHFHAAIEGDSD
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: VNALKDRAEAYLLEDLYEEAIKDYETAQANSEN
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: TRAKERICHCLSKNQQATEAITVCTQVLQLEPT
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: LNKQIESAEEFIREGRYEDAISKYDSVMKTEPD
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: TSRLQRGHLLLKQGKFDEAEDDFKNVLKSNPS
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: YIAYYRRATVYLAMGKSKAAIRDLSKVVELKQD
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: LQRLYSQALSAYRQEDYEAAIPLLDEILAVCVW
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: RDYYKILGVKRNARKQEIIKAYRKLASQWHPDNFQSEEEKKKAEKKFIDIAAAKEVLTDPE
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: FTSRLQRGHLLLKQGKFDEAEDDFKNVLKSNPS
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: EAFYKISRIYYQLGDHELSLSEVRECLKLDQD
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: TEAFYKISRIYYQLGDHELSLSEVRECLKLDQD
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: DYYKILGVKRNARKQEIIKAYRKLASQWHPDNFQSEEEKKKAEKKFIDIAAAKEVLTDPEMRRKF
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: DYYKILGVKRNARKQEIIKAYRKLASQWHPDNFQSEEEKKKAEKKFIDIAAAKEVLTDPEMRRKFDAG
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: DYYKILGVKRNARKQEIIKAYRKLASQWHPDNFQSEEEKKKAEKKFIDIAAAKEVLT
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: YKILGVKRNARKQEIIKA
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: YRKLASQWHPDNFQS
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: KAEKKFIDIAAAKEVLTDPE
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain
Protein sequence:
MRSLRRVLLQLVLLAGVAFRGVRFDDAADAAAAAQGSSDLFELPSPSPTLALPGGGDEGASTEIIAAPWPGRHGLFTPPRSTSQPARAVVQPAADFGSQLQFYDNGTIQLVDLLSKLPRWQFSTGPPLSKHITTSKPDLNYVIYLDGSETSDLIEVHNGSGVRLPWKLEEFIAETPYIRDSFVTIGSKVSTTFVVNADSGEIIYKHSLPVALNEVGGPLVEEIPSKLDAARSGTSANIIVVVRTDYSISASDLGEHLFNWTRTSFTANYYARYGHQDMLAQSSCLRGNIPCIRTEGPPIKLYLPDSSSDNAIVLRPVNEVSAVDALEPLLPPKKLPQPAGESNVALDSAQNQTADIALGHFVPADTELTNSVTKFSYRWLFPTFLMLLIMACLVKLADASKYCRQFVIRFLKPFMRDEKLMDPRGKSEGTSKRRKARKKDGLINSTQIFSASDKEGNGTGGSTEAQSNKAHDSTNVELPNGLNGRQIGKLCVYSKEIGKGSNGTVVFEGSYGGREVAVKRLLRSHNDIASKEIENLIASDQDPNIVRMYGFEQDNDFVYISLERCRCSLADLIQLHSVPPFSNTKGTDIELWRQDGLPSAQLLKLMRDVVAGIVHLHSLGIIHRDLKPQNVLISKEGPLRAKLSDMGISKRLQEDMTSVSHHGTGFGSSGWQAPEQLRHGRQTRAIDLFSLGCLIFYCITKGKHPFGEYYERDMKIINNQFDLFIVDHIPEAVHLISQLLDPDPEKRPTAVYVMHHPFFWSPELCLSFLRDTSDRIEKTSETDLIDALEGINVEAFGKNWGEKLDAALLADMGRYRKYSFESTRDLLRLIRNKSGHYREFSDDLKELLGSLPEGFVQYFSSRFPKLLIKVYEVMSEHCKDEEAFSKYFLGSSA

Annotated regions:
phrase: IIHRDLKPQNVL
type: ACTIVE_SITE
name: Ser/Thr_kinase_AS
description: Serine/threonine-protein kinase, active site

phrase: CVYSKEIGKGSNGTVVFEGSYGGREVAVKRLLRSHNDIASKEIENLIASDQDPNIVRMYGFEQDNDFVYISLERCRCSLADLIQLHSVPPFSNTKGTDIELWRQDGLPSAQLLKLMRDVVAGIVHLHSLGIIHRDLKPQNVLISKEGPLRAKLSDMGISKRLQEDMTSVSHHGTGFGSSGWQAPEQLRHGRQTRAIDLFSLGCLIFYCITKGKHPFGEYYERDMKIINNQFDLFIVDHIPEAVHLISQLLDPDPEKRPTAVYVMHHPF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: LSFLRDTSDRIEKTSETDLIDALEGINVEAFGKNWGEKLDAALLADMGRYRKYSFESTRDLLRLIRNKSGHYREFSDDLKELLGSLPEGFVQYFSSRFPKLLIKVYEVMSEHCKDEEAFSKY
type: DOMAIN
name: KEN_dom
description: KEN domain

phrase: PELCLSFLRDTSDRIEKTSETDLIDALEGINVEAFGKNWGEKLDAALLADMGRYRKYSFESTRDLLRLIRNKSGHYREFSDDLKELLGSLPEGFVQYFSSRFPKLLIKVYEVMSEHCKDEEAFSKYFL
type: DOMAIN
name: KEN_dom
description: KEN domain

phrase: CVYSKEIGKGSNGTVVFEGSYGGREVAVKRLLRSHNDIASKEIENLIASDQDPNIVRMYGFEQDNDFVYISLERCRCSLADLIQLHSVPPFSNTKGTDIELWRQDGLPSAQLLKLMRDVVAGIVHLHSLGIIHRDLKPQNVLISKEGPLRAKLSDMGISKRLQEDMTSVSHHGTGFGSSGWQAPEQLRHGRQTRAIDLFSLGCLIFYCITKGKHPFGEYYERDMKIINNQFDLFIVDHIPEAVHLISQLLDPDPEKRPTAVYVMHHPF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: SKEIGKGSNGTVVFEGSYGGREVAVKRLLRSHNDIASKEIENLIASDQDPNIVRMYGFEQDNDFVYISLERCRCSLADLIQLHSVPPFSNTKGTDIELWRQDGLPSAQLLKLMRDVVAGIVHLHSLGIIHRDLKPQNVLISKEGPLRAKLSDMGISKRLQEDMTSVSHHGTGFGSSGWQAPEQLRHGRQTRAIDLFSLGCLIFYCITKGKHPFGEYYERDMKIINNQFDLFIVDHIPEAVHLISQLLDPDPEKRPTAVYVMHHPF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain
Protein sequence:
MQQNELKTPYFSINEDKLIENLEKAKQLKDISGVKLVLALKCFSTWGVFDIIKPYLDGTTSSGPFEVKLGYETFGGETHAYSVGYSEDDVRDVADICDKMIFNSQSQLAAYRHIVEGKASIGLRLNPGVSYAGQDLANPARQFSRLGVQADHIKPEIFDGIDGVMFHMNCENKDVDAFIGLLDAISAQFGEYLDKLDWVSMGGGVFFTWPGYDIEKLGLALKAFAEKHGVQMYLEPGERIITKTTDLVVTVVDIVENVKKTAIVDSATEAHRLDTLIYNEPASILEASENGEHEYVIGSCSCLAGDQFCVANFEQPLEIGQRLHILDSAGYTMVKLNWFNGLRMPSVYCERSNGDIQKLNEFDYSDFKRSLSQWSVI

Annotated regions:
Protein sequence:
MNKYTINDITRASGGFAMLAVDQREAMRMMFAAAGAPAPVADSVLTDFKVNAAKALSPYASAILVDQQFCYRQVVEQNAIAKSCAMIVAADEFIPGNGIPVDSVVIDRKINPLQIKQDGGKALKLLVLWRSDEDAQQRLDMVKEFNELCHSHGLVSIIEPVVRPPRRGDKFDREQAIIDAAKELGDSGADLYKVEMPLYGKGPQQELLCASQRLNDHINMPWVILSSGVDEKLFPRAVRVAMTAGASGFLAGRAVWASVVGLPDNELMLRDVCAPKLQQLGDIVDEMMAKRR

Annotated regions:
Protein sequence:
MARKRRLTGEAALNAAYGKSDHAPLLEAWGVDLPDDLLRLALTHRSFANENGHLPNNERLEFLGDAVLGLAVAEQLYRQFPERAESDISKMRSGVVNMYALADVARRLGMGDYILLGRGEMLTGGKDKHSILADSVESMLGAIYLHHGFEVARATVLRLFAEKITEAPTTGLTMDWKTVLLEKLSDMKLPLPTYEVRGEGPEHDKTFYATVTIEDLVTHGEGHTKKVAEHAAAKQAVQKLNERA

Annotated regions:
phrase: DLLRLALTHRSFANENGHLPNNERLEFLGDAVLGLAVAEQLYRQFPERAESDISKMRSGVVNMYALADVARRLGMGDYILLGRGEMLTGGKDKHSILADSVESMLGAIYLHHGFEVARATVLRLFAEKITEAP
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: DLLRLALTHRSFANENGHLPNNERLEFLGDAVLGLAVAEQLYRQFPERAESDISKMRSGVVNMYALADVARRLGMGDYILLGRGEMLTGGKDKHSILADSVESMLGAIYLHH
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: ERLEFLGD
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: DWKTVLLEKLSDMKLPLPTYEVRGEGPEHDKTFYATVTIEDLVTHGEGHTKKVAEHAAAKQAVQKLN
type: DOMAIN
name: dsRBD_dom
description: Double-stranded RNA-binding domain

phrase: WKTVLLEKLSDMKLPLPTYEVRGEGPEHDKTFYATVTIEDLVTHGEGHTKKVAEHAAAKQAVQKL
type: DOMAIN
name: dsRBD_dom
description: Double-stranded RNA-binding domain

phrase: DDLLRLALTHRSFANENGHLPNNERLEFLGDAVLGLAVAEQLYRQFPERAESDISKMRSGVVNMYALADVARRLGMGDYILLGRGEMLTGGKDKHSILADSVESMLGAIYLHHGFEVARATVLRL
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: WKTVLLEKLSDMKLPLPTYEVRGEGPEHDKTFYATVTIEDLVTHGEGHTKKVAEHAAAKQAVQK
type: DOMAIN
name: dsRBD_dom
description: Double-stranded RNA-binding domain

phrase: DLLRLALTHRSFANENGHLPNNERLEFLGDAVLGLAVAEQLYRQFPERAESDISKMRSGVVNMYALADVARRLGMGDYILLGRGEMLTGGKDKHSILADSVESMLGAIYLHHGFEVARATVLRLFAEKITE
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain
Protein sequence:
MTEQRAGSPAGNDLRSCAVIDLDAVRTSVTALVARAGDAATMAVVKADGYGHGMIPCARAALEGGATWLGTAFLEEALALRAAGFTVPVLSWLAAPGESFAAAIAADVDLSASAGWALEEAAAAARRTGRTARVHLKADTGLGRAGATEADWPALCDAGAALEAEGVIEVIGVWSHFAFADAPGHPTVQGQIGRFRDAIDIATKAGLHPSVRHLANSAATLVSPEAHFDLVRPGVSVYGLSPGPEIGPPAAFGLRPAMTLTTHAALTKRVPAGTGVSYAHRYTTTRETTLAVVPLGYADGIPRSATNTAEVLFGGRRRRIAGTVCMDQFVLDVGDDQVAAGDEVLLFGPGDRGEPTADDWAAALGTINYEIVSRVGARVPRRYV

Annotated regions:
phrase: AVVKADGYGH
type: BINDING_SITE
name: Ala_racemase_pyridoxalP-BS
description: Alanine racemase, pyridoxal-phosphate attachment site

phrase: AMTLTTHAALTKRVPAGTGVSYAHRYTTTRETTLAVVPLGYADGIPRSATNTAEVLFGGRRRRIAGTVCMDQFVLDVGDDQVAAGDEVLLFGPGDRGEPTADDWAAALGTINYEIVSRVGARVPRRY
type: DOMAIN
name: Ala_racemase_C
description: Alanine racemase, C-terminal

phrase: IDLDAVRTSVTALVARAGDAATMAVVKADGYGHGMIPCARAALEGGATWLGTAFLEEALALRAAGFTVPVLSWLAAPGESFAAAIAADVDLSASAGWALEEAAAAARRTGRTARVHLKADTGLGRAGATEADWPALCDAGAALEAEGVIEVIGVWSHFAFADAPGHPTVQGQIGRFRDAIDIATKAGLHPSVRHLANSAATLVSPEAHFDLVRPGVSVYGLS
type: DOMAIN
name: Ala_racemase_N
description: Alanine racemase, N-terminal

phrase: AMTLTTHAALTKRVPAGTGVSYAHRYTTTRETTLAVVPLGYADGIPRSATNTAEVLFGGRRRRIAGTVCMDQFVLDVGDDQVAAGDEVLLFGPGDRGEPTADDWAAALGTINYEIVSRVGARVPRR
type: DOMAIN
name: Ala_racemase_C
description: Alanine racemase, C-terminal
Protein sequence:
MIYAGILAGGIGSRMGNVPLPKQFLDIDNKPILIHTIEKFILVSEFNEIIIATPAQWISHTQDILKKYNITDQRVKVVAGGTDRNETIMNIIDYIRNVNGINNDDVIVTHDAVRPFLTQRIIKENIEVAEKYGAVDTVIEAIDTIVMSKDKQNIHSIPVRNEMYQGQTPQSFNIKLLQDSYRALSSAQKEILSDACKIIVESGHPVKLVRGELYNIKVTTPYDLKVANAIIQGDIADD

Annotated regions:
phrase: IVTHDAV
type: CONSERVED_SITE
name: ISPD_synthase_CS
description: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site
Protein sequence:
MLVPTVIEQTARGERAYDIYSRLLKDRIIMLSGEINDQMANSIIAQLLFLDAQDNTKDISLYINSPGGVITSGLAIMDTMNFIKSDVSTIAIGMAASMASILLTSGTKGKRFALPNSTVLIHQPLGGAQGQQTDIQIAANEILKSRKKLNQILHETTGQPLDKILKDTERDNYLSAEEAKDYGLIDEILVNQKKD

Annotated regions:
phrase: TIAIGMAASMA
type: ACTIVE_SITE
name: ClpP_Ser_AS
description: ClpP, Ser active site

phrase: RFALPNSTVLIHQ
type: ACTIVE_SITE
name: ClpP_His_AS
description: ClpP, histidine active site
Protein sequence:
MIKYNPAYLNLNERLSQIWLNKYTILFILAAFKLLFFSTSLRNALDVSKSYILSNCGTIDTMYSKTLNSTPHYIGVFGNYLINKALIQTVKTSLSTVSLLVYASEEILEFMVDFYLGTYECLLVAAIDGTVDTAVNATEKLIGFVNGSVGSIANDLDDGLNDLSKIINKAISAAEKVGSLFSDDDDDDDDDSSSSSKNIASVNLTIKALRNLYIPSSINDKLEKISDSTPTFDEVKNSTKNLIGIPFEKIRKEIKSINTTNIVGDPDVLYVPPINDNSNYQGICSANKNHITSFFYSMDHLLKVATIVCIVLLLIGAVVVLFPEFLEEFKLWKRLTQLREFYWYNKDLYPSSSELETINQEVKDPFNDKKNIIPDQFDVIAGYQTCFNPWHTRIVNFIEKIITYFNRSSFQNESNKRRRQWIVAYVASERALFILGIGMLAFFVSILQLIIITLLKRTFDNNSNMININSIANSSAVHSLKDDVSTWSNQVNLYIKQTEGNLNHQVFGWIEDSTESLNNTVTHMINGIDDTLADIFNGTLLYNPMKTVVSCVIENKLYTIEKSLTWIHNKANVTLPRINGDDINNLLSSSNNSTNATGSNNLATELFEDVIDDSKKIINKVIQTYHKSIIYEMIISLVFIGIWSSQIPIALVIARFKNF

Annotated regions:
Protein sequence:
MTKEQLQQFFVSQGDKSFRGTQVYEWLWGKGAHSFDDMTNISKETRQMLDDNFVINHIRVDQMQRSSDGTIKNAVKLHDDLTVESVLIPTPSRTTACVSSQVGCSLDCKFCATAKLKRMRNLNPDEIYDQVVAIDNESRLYFDKPLSNIVFMGMGEPLMNYNNVLKAIEKITSPEGLGMSPKRITVSTSGVPKMIKKMADEEVKFKLAVSLHSAIDEVRTSIMPFNATFPLNDLREALEYWYAKTKSRITYEYVVWKGINDRRKDVEALVKFAKYVPCKVNLIEYNPIGDDHFKQAPDETTDMYVRELERNGITVTVRRSRGKDIDAACGQLANKS

Annotated regions:
phrase: MTKEQLQQFFVSQGDKSFRGTQVYEWLWGKGAHSFDDMTNISKETRQMLDDNFV
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: TPSRTTACVSSQVGCSLDCKFCATAKLKRMRNLNPDEIYDQVVAIDNESRLYFDKPLSNIVFMGMGEPLMNYNNVLKAIEKITSPEGLGMSPKRITVSTSGVPKMIKKMADEEVKFKLAVSLHSAIDEVRTSIMPFNATFPLNDLREALEYWYAKTKSRITYEYVVWKGINDRRKDVEALVKFAKYVPCKVNLIEYNPIGDDHFKQAPDETTDMYVRELERNGITVTVRRSRGK
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SSQVGCSLDCKFCATAKLKRMRNLNPDEIYDQVVAIDNESRLYFDKPLSNIVFMGMGEPLMNYNNVLKAIEKITSPEGLGMSPKRITVSTSGVPKMIKKMADEEVKFKLAVSLHSAIDEVRTSIMPFNATFPLNDLREALEYWYAKTKSRITYEYVVWKGINDRRKDVEAL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: MTKEQLQQFFVSQGDKSFRGTQVYEWLWGKGAHSFDDMTNISKETRQMLDDNFVINHIRVDQMQRSSDGTIKNAVKLHDDLTVESVLIPTPSRTTACVSSQVGCSLDCKFCATAKLKRMRNLNPDEIYDQVVAIDNESRLYFDKPLSNIVFMGMGEPLMNYNNVLKAIEKITSPEGLGMSPKRITVSTSGVPKMIKKMADEEVKFKLAVSLHSAIDEVRTSIMPFNATFPLNDLREALEYWYAKTKSRITYEYVVWKGINDRRKDVEALVKFAKYVPCKVNLIEYNPIGDDHFKQAPDETTDMYVRELERNGITVTVRRSRGKDIDAACGQLAN
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MIEKLAEIRKKIDEIDNKILKLIAERNSLAKDVAEIKNQLGIPINDPEREKYIYDRIRKLCKEHNVDENIGIKIFQILIEHNKALQKQYLEETQNKNKK

Annotated regions:
phrase: IRKKIDEIDNKILKLIAERNSLAKDVAEIKNQLGIPINDPEREKYIYDRIRKLCKEHNVDENIGIKIFQILIEHNKALQ
type: DOMAIN
name: CM_II_prokaryot
description: Chorismate mutase II, prokaryotic-type

phrase: RKKIDEIDNKILKLIAERNSLAKDVAEIKNQLGIPINDPEREKYIYDRIRKLCKEHNVDENIGIKIFQILIEHNKALQKQ
type: DOMAIN
name: CM_II_prokaryot
description: Chorismate mutase II, prokaryotic-type

phrase: MIEKLAEIRKKIDEIDNKILKLIAERNSLAKDVAEIKNQLGIPINDPEREKYIYDRIRKLCKEHNVDENIGIKIFQILIEHNKALQKQY
type: DOMAIN
name: CM_II_prokaryot
description: Chorismate mutase II, prokaryotic-type

phrase: LAEIRKKIDEIDNKILKLIAERNSLAKDVAEIKNQLGIPINDPEREKYIYDRIRKLCKEHNVDENIGIKIFQILIEHNKAL
type: DOMAIN
name: Chorismate_mutase_arc
description: Chorismate mutase, archaeal
Protein sequence:
MWGGRFNEQVDALMAQFNNSFSFDRRMWREDIRGSIAWARQLARVGVISAEERDTLVDGLNMVYAEFADGRFEARETDEDIHTAVERRLGELVGTVAGKLHTGRSRNDQVATDVRLWTLGAIRRIDDRLRALQTALLAQAETAGAALMPGYTHLQRAQPVLLAHWLLAHFWPLQRDRERLADCAKRTATLPLGSGAIAGTPLMVDRTALAVELGMTAVSPNSIDAVSDRDFIAEFLFCAALIGTHLSRLAEDMIIYSSAEFGFVTLADAYSTGSSLMPQKKNPDSFELLRGKAGRLTGDLIAVLTMLKGLPSAYDKDLQEDKEPLFDAADTLELALPVAAGAVATARFHPDRMRAALDDAMLATDLADYLVARGVPFREAHHIVGRLVREAEQRGVALSALPLEVFLAAHPVCEPDVLQVFDFDRSVAMRRVPGATAPEAVNEQIAQARRCVEER

Annotated regions:
phrase: GRFNEQVDALMAQFNNSFSFDRRMWREDIRGSIAWARQLARVGVISAEERDTLVDGLNMVYAEFADGRFEARETDEDIHTAVERRLGELVGTVAGKLHTGRSRNDQVATDVRLWTLGAIRRIDDRLRALQTALLAQAETAGAALMPGYTHLQRAQPVLLAHWLLAHFWPLQRDRERLADCAKRTATLPLGSGAIAGTPLMVDRTALAVELGMTAVSPNSIDAVSDRDFIAEFLFCAALIGTHLSRLAEDMIIYSSAEFGFVTLADAYSTGSSLMPQKKNPDSFELLRGKAGRLT
type: DOMAIN
name: Fumarate_lyase_N
description: Fumarate lyase, N-terminal

phrase: GSSLMPQKK
type: CONSERVED_SITE
name: Fumarate_lyase_CS
description: Fumarate lyase, conserved site

phrase: MLATDLADYLVARGVPFREAHHIVGRLVREAEQRGVALSALPLEVFLAAHPVCEPDVLQVFDFDRSV
type: DOMAIN
name: Arg_succ_lyase_C
description: Argininosuccinate lyase, C-terminal
Protein sequence:
MLGCFFFFFIQYKVQVEIFVFKVHYLREDTPFPKMVVDVDALANEAIGLLDQCKDDNYRVCILIVGPPGSGKSTVAQDLSRQINHRFDEYRLQGNQKSAHGGTRSRASDVALASDVPEITTPLSEELAFNGGILPKYVEDVNFQPVKRRLENGDLQILGRGGLPNAFTISNDVEPDEESSFAQIVPMDGFHLSRQCLSSFQNPQEAHKRRGSPPTFDSNNFAQLCKTLAQTCTIKPGSCDAKSCFEFMAKTYDPHFPCIKIPGFDHSLKDPTPDQFCLNGHTRIVILEGLYLLYDKENWQRVHEILQNTGSLLVWYIDIEDHVIEERVAKRHFNSGLADSVEQGRLKFQGNDLLNARLIRKNLVQSGKVVTLRND

Annotated regions:
Protein sequence:
MQKRAIYPGTFDPITNGHLDIVTRATQMFDHVILAIAASPSKKPMFTLDERVALAQKATAHLGNVEVVGFSDLMANFARDRQANILIRGLRAVADFEYEMQLAHMNRHLMPQLESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPDNVHQALMDKLK

Annotated regions:
phrase: IYPGTFDPITNGHLDIVTRATQMFDHVILAIAASPSKKPMFTLDERVALAQKATAHLGNVEVVGFSDLMANFARDRQANILIRGLRAVADFEYEMQLAHMNRHLMPQLESVFLMPSKEWSFISSSLVK
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: RAIYPGTFDPITNGHLDIVTRATQMFDHVILAIAASPSKKPMFTLDERVALAQKATAH
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain
Protein sequence:
MSNTKQAPKVGFVSLGCPKNLVDSERILTQLRTEGYDVVPSYDDAELVVVNTCGFIDSAVQESLEAIGEALAENGKVIVTGCLGAKENQIREIHPKVLEITGPHAYEEVLGHVHKYVAKPTHNPFTSLVPAHGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLAEAKRLKEAGVKEILVISQDTSAYGVDVKHRTGFYDGMPVKTSMVALCEELAKLDIWVRLHYVYPYPHVDDVIPLMRDGKVLPYLDIPLQHASPRILKLMKRPGTVERTLERIQKWREICPEITLRSTFIVGFPGETEEEFQMLLDFIDKAELDRVGCFKYSPVEGAKANELPDPVPEDVQEERFQRFMELQQQVSIRKLARKVGKEMTVLIDEVDEEGATGRSFADAPEIDGLVYLNGETDLKPGDLVKVRIDEADEYDLWASLIG

Annotated regions:
phrase: KISEGCNHRCTFCIIPSMRGDLVSRPIGEVLAEAKRLKEAGVKEILVISQDTSAYGVDVKHRTGFYDGMPVKTSMVALCEELAKLDIWVRLHYVYPYPHVDDVIPLMRDGKVLPYLDIPLQHASPRILKLMKRPGTVERTLERIQKWREICPEITLRSTFIVGFPGETEEEFQMLLDF
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: KVGFVSLGCPKNLVDSERILTQLRTEGYDVVPSYDDAELVVVNTCGFIDSAVQESLEAIGEALAENGKVIVTGCLGAKENQIREIHP
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: KQAPKVGFVSLGCPKNLVDSERILTQLRTEGYDVVPSYDDAELVVVNTCGFIDSAVQESLEAIGEALAENGKVIVTGCLGAKENQIREIHPKVLEITGPHAYEEVLGHVHKYVAKPTHNPFTSLVPAHGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLAEAKRLKEAGVKEILVISQDTSAYGVDVKHRTGFYDGMPVKTSMVALCEELAKLDIWVRLHYVYPYPHVDDVIPLMRDGKVLPYLDIPLQHASPRILKLMKRPGTVERTLERIQKWREICPEITLRSTFIVGFPGETEEEFQMLLDFIDKAELDRVGCFKYSPVEGAKANELPDPVPEDVQEERFQRFMELQQQVSIRKLARKVGKEMTVLIDEVDEEGATGRSFADAPEIDGLVYLNGETDLKPGDLVKVRIDEADEYDLWAS
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LKISEGCNHRCTFCIIPSMR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: LTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLAEAKRLKEAGVKEILVISQDTSAYGVDVKHRTGFYDGMPVKTSMVALCEELAKLDIWVRLHYVYPYPHVDDVIPLMRDGKVLPYLDIPLQHASPRILKLMKRPGTVERTLERIQKWREICPEITLRSTFIVGFPGETEEEFQMLLDFIDKAELDRVGCFKYSPVEGAKANELPDPVPEDVQEERFQRFMELQQQVSI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: PKVGFVSLGCPKNLVDSERILTQLRTEGYDVVPSYDDAELVVVNTCGFIDSAVQESLEAIGEALAENGKVIVTGCLGAKENQIREIHPKVLEITGPHAYEEVLGHVHKYV
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: VGKEMTVLIDEVDEEGATGRSFADAPEIDGLVYLNGETDLKPGDLVKVRIDEADEYDLWASL
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: ARKVGKEMTVLIDEVDEEGATGRSFADAPEIDGLVYLNGETDLKPGDLVKVRIDEADEYDLWASLI
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: HYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLAEAKRLKEAGVKEILVISQDTSAYGVDVKHRTGFYDGMPVKTSMVALCEELAKLDIWVRLHYVYPYPHVDDVIPLMRDGKVLPYLDIPLQHASPRILKLMKRPGTVERTLERIQKWREICPEITLRSTFIVGFPGETEEEFQMLLDFIDKAELDRVGCFKYSPVEGAKANELPDPVPEDVQEERFQRFM
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain
Protein sequence:
MSKDQIIEAIKEMTVLELNDLVKAIEEEFGVTAAAPVAVAGGAAEGGAAEQTEFDVVLESAGSSKIGVIKVVREITGLGLKEAKALVDGAPAPIKEGVAKEEAEEIKGKLEEAGASVELK

Annotated regions:
phrase: KDQIIEAIKEMTVLELNDLVKAIEEEFGVTAAAPVAVAGGAAEGGA
type: DOMAIN
name: Ribosomal_bL12_oligo
description: Large ribosomal subunit protein bL12, oligomerization

phrase: FDVVLESAGSSKIGVIKVVREITGLGLKEAKALVDGAPAPIKEGVAKEEAEEIKGKLEEAGASVEL
type: DOMAIN
name: Ribosomal_bL12_C
description: Large ribosomal subunit protein bL12, C-terminal
Protein sequence:
MRPLLIAPGRFISQLCCRRKPPASPQSKICLTMARPSSNMADFRKCFANAKHIAIISGAGVSAESGVPTFRGAGGYWRKWQAQDLATPQAFARNPSQVWEFYHYRREVMRSKEPNPGHLAIAQCEARLRDQGRRVVVITQNIDELHRKAGTKNLLEIHGTLFKTRCTSCGTVAENYRSPICPALAGKGAPEPETQDARIPVDKLPRCEEAGCGGLLRPHVVWFGENLDPAILEEVDRELALCDLCLVVGTSSVVYPAAMFAPQVASRGVPVAEFNMETTPATDRFRFHFPGPCGKTLPEALAPHETERTS

Annotated regions:
phrase: MARPSSNMADFRKCFANAKHIAIISGAGVSAESGVPTFRGAGGYWRKWQAQDLATPQAFARNPSQVWEFYHYRREVMRSKEPNPGHLAIAQCEARLRDQGRRVVVITQNIDELHRKAGTKNLLEIHGTLFKTRCTSCGTVAENYRSPICPALAGKGAPEPETQDARIPVDKLPRCEEAGCGGLLRPHVVWFGENLDPAILEEVDRELALCDLCLVVGTSSVVYPAAMFAPQVASRGVPVAEFNMETTPATDRFRFHFPGPCGKTLPEALAPHET
type: DOMAIN
name: Ssirtuin_cat_dom
description: Sirtuin family, catalytic core domain
Protein sequence:
MGGKWSKSSIVGWSAVRERIRRTPPTEERAEAAAVGAGAVSQDLARHGAITSSNINNPDCAWLEAQTEDEEVCFPVRPQVPLRPMTFKGAYDLGFFLKEKGGLDGLIYSKRRQEILDLWVYHTQGFFPDWQNYTPGPGTRFPLTFGWCFKLVPVDPKEVEEATEGENNCLXHPMNQHGMDDEHGEVLMWKFDSSLARRHIARELHPELYKDC

Annotated regions:
Protein sequence:
MQISSLSPPEIVAVLPAAGNGSRMQNDRPKQYLTIGNDATGHKTILEHTIDALLRHSRVQRVVVVISPDDTFFHTLAIANDPRICAVTGGKLRADSVLAGLAVVADSAWALVHDAARPCLHQDDLTRLLAIVEQSDVGGILAAPVRDTMKRSTDGFIDRTVERNDLWHALTPQLFPAALLKQCLQRALQDGVAVTDEASALEYCGYRPQIISGRSDNIKVTRPEDLALAEFYLTRLQ

Annotated regions:
Protein sequence:
MYKQANPDLWQGRIDSETDESQFRHFQTIELKDINETKVDKKAGTGILGYAVDKGVELNNGRVGAQEGPDAVRKAFGNLSVLTPCPVYDYGNVYHDHDHLIDTQEEYAELAAKMFQNHNYSFLVGGGHDIAYAQYLAMRKAYPDSSIGVINIDAHFDTRKADSSTSGTSFRQILEGDDNADYFVLGIQSASNTKSLFDYAEERGIEYVTADEILHEISPTIKDKIDHFINRHDVIMFTICMDVVDSAFAPGVSAPAVNGLTPHIILELSRRIVGHPKLVSISVAETNPLYDMDNRTAKLVALFLHNFIH

Annotated regions:
Protein sequence:
MESLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIGYRVTYVRNITDIDDKIIRRAVENGETIKSLTDRFIGAMHEDETALGIQRPDVEPRATQFIPQMLGMIETLETNGYAYQAADGDVNYSVRKFADYGKLSGKSLDDLRAGERVAANDAKQDPLDFVLWKRAKADEPEGASWASKYGMGRPGWHIECSAMGCSLLGNHFDIHGGGQDLQFPHHENEIAQSEGATGETFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVVRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDTLALDWNEPHAQRFAAAMNDDFNTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQQASGAAQAGGLAADEIEAQIAARVAAKQAKDYAEADRIRAELLEAGIALEDKPGGSTEWRRV

Annotated regions:
phrase: FVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIGYRVTYVRNITDIDDKIIRRAVENGETIKSLTDRFIGAMHEDETALGIQRPDVEPRATQFIPQMLGMIETLETNGYAYQAADGDVNYSVRKFADYGKLSGKSLDDLRAGERVAANDAKQDPLDFVLWKRAKADEPEGASWASKYGMGRPGWHIECSAMGCSLLGNHFDIHGGGQDLQFPHHENEIAQSEGATGETFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVVRFFIVRTHYRSPLNYSDVHLDDA
type: DOMAIN
name: tRNA-synt_1_cat_dom
description: tRNA synthetases class I, catalytic domain

phrase: DEIEAQIAARVAAKQAKDYAEADRIRAELLEAGIALEDKPGGSTEW
type: DOMAIN
name: CysS_C
description: Cysteinyl-tRNA ligase, anticodon binding domain

phrase: RFAAAMNDDFNTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAF
type: DOMAIN
name: Cys-tRNA-synt_Ia_DALR
description: Cysteinyl-tRNA synthetase, class Ia, DALR

phrase: RIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIGYRVTYVRNITDIDDKIIRRAVENGETIKSLTDRFIGAMHEDETALGIQRPDVEPRATQFIPQMLGMIETLETNGYAYQAADGDVNYSVRKFADYGKLSGKSLDDLRAGERVAANDAKQDPLDFVLWKRAKADEPEGASWASKYGMGRPGWHIECSAMGCSLLGNHFDIHGGGQDLQFPHHENEIAQSEGATGETFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLERYDAEVVRFFIVRTHYRSPLNY
type: DOMAIN
name: tRNA-synt_1_cat_dom
description: tRNA synthetases class I, catalytic domain

phrase: RFAAAMNDDFNTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGL
type: DOMAIN
name: Cys-tRNA-synt_Ia_DALR
description: Cysteinyl-tRNA synthetase, class Ia, DALR
Protein sequence:
MDVRRFLRGPIFWIAMAVIAVLVGSSLISGIGAPDEVDTGEAISDITSGNVDTATLIDRDQVLELTLRNGDEVRSHFITGQGVELQNLLQEKTDAGQLPGGYNVVVPSENLLVTLFISLLPFALLILLMVFIFSQMQGGGGRLMNFGKSKAKAITKDMPQTTFEDVAGSDEAVEELVEIKDFLSDAERFQKVGAKIPKGVLLYGPPGTGKTLLARAVAGEAGAPFYSISGSDFVEMFVGVGASRVRDLFEQAKANAPAIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQMLVEMDGFDVTGGVILIAATNRPDILDPALLRPGRFDRQIAVERPDLNGRYEILKVHAKGKPITDDIDLMAVARRTPGFTGADLANVLNEAALLTARSDKTFIDDEALDEAIDRVIAGPQKRTRVMDEHEKTITAYHEAGHALVAAALPGNDPVHKITIMPRGRALGYTMVLPDQDKYSTTRSEMLNQLAYMLGGRAAEELIFHDPTTGAANDIEKATSVARSMVTQFGMTERLGAIKYGQEQSEVFLGRDMGHMRDYSEEVAAAIDEEVRGFIEAAHQEAYDVLVNNREILDAMVLALLERETLDKAEIEEIFAELKLQSPRPAWTGSARRAPDTRGPIPFPPASSNGHSSSSAIEPALNESRDPDAQ

Annotated regions:
phrase: VLLYGPPGTGKTLLARAVAGEAGAPFYSISGSDFVEMFVGVGASRVRDLFEQAKANAPAIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQMLVEMDGFDVTGGVILIAATNRPDILDPALLRPGRFDRQIAV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: IPKGVLLYGPPGTGKTLLARAVAGEAGAPFYSISGSDFVEMFVGVGASRVRDLFEQAKANAPAIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQMLVEMDGFDVTGGVILIAATNRPDILDPALLRPGRFDRQIAVERP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: DIDLMAVARRTPGFTGADLANVLNEAALLTARSDKTFIDDEAL
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: VILIAATNRPDILDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: RVMDEHEKTITAYHEAGHALVAAALPGNDPVHKITIMPRGRALGYTMVLPDQDKYSTTRSEMLNQLAYMLGGRAAEELIFHDPTTGAANDIEKATSVARSMVTQFGMTERLGAIKYGQEQSEVFLGRDMGHMRDYSEEVAAAIDEEVRGFIEAAHQEAYDVLVNNREILDAMVLALLERETLDKAEIEE
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: PIFWIAMAVIAVLVGSSLISGIGAPDEVDTGEAISDITSGNVDTATLIDRDQVLELTLRNGDEVRSHFITGQGVELQNLLQEKT
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular