nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSNSAPSFPPHRPEPAPAGGPNRYSARITAPASQGASQAMLLGTGLSLNDLKKPQVGVGSVWYEGNTCNMHLLDLAAEVKTGLTAAGLVGMRFNTVGVSDGISMGTEGMSYSLQSRDLIADSIETIVAAQWYDGLVTLPGCDKNMPGAVIAMCRLDRPSIMVYGGTIQPGCRPGRTPAAPGGMKNENLVPDAQQNDGATEEGDKLDIVSAFQSYGQAIAGSITEAERQEIVANSCPGAGACGGMYTANTMACAIEALGLSLPYSSSIPATDPGKVQECRAVGEVLKDCLEADRKPSDLLDKTSFENAVALVTALGGSTNAVLHLLAMAHAANVEFTLDDIAAVSERTPYLADLKPSGKYVMSDLHAVGGTPAVIKMLIAAGLMDGSRPTVTGRTLAENVADLPDLIEGQQIIHPVDDPIKPTGHLRILKGNLAPGGAVAKITGKEGLKFSGPARCFNSEEDMLAGLEAGKIQKGDVVVIRHEGPVGGPGMPEMLTPTSAIVGAGLGNDVAMVTDGRFSGGSHGFIVGHVTPEAHVGGPIGLIRDGETVTVDAETNSLSVDLSDEELETRRADFPLPPPRATRGTLGKYVKLVSDASTGCVTDG

Annotated regions:
phrase: CDKNMPGAVI
type: CONSERVED_SITE
name: DiOHA_6PGluconate_deHydtase_CS
description: Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site

phrase: QIIHPVDDPIKPTGHLRILKGNLAPGGAVAKITGKEGLKFSGPARCFNSEEDMLAGLEAGKIQKGDVVVIRHEGPVGGPGMPEMLTPTSAIVGAGLGNDVAMVTDGRFSGGSHGFIVGHVTPEAHVGGPIGLIRDGETVTVDAETNSLSVDLSDEELETRRADFPLPPPRATRGTLGKYVKLVSDASTG
type: DOMAIN
name: ILV_EDD_C
description: Dihydroxy-acid/6-phosphogluconate dehydratase, C-terminal

phrase: AMVTDGRFSGG
type: CONSERVED_SITE
name: DiOHA_6PGluconate_deHydtase_CS
description: Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site

phrase: KPQVGVGSVWYEGNTCNMHLLDLAAEVKTGLTAAGLVGMRFNTVGVSDGISMGTEGMSYSLQSRDLIADSIETIVAAQWYDGLVTLPGCDKNMPGAVIAMCRLDRPSIMVYGGTIQPGCRPGRTPAAPGGMKNENLVPDAQQNDGATEEGDKLDIVSAFQSYGQAIAGSITEAERQEIVANSCPGAGACGGMYTANTMACAIEALGLSLPYSSSIPATDPGKVQECRAVGEVLKDCLEADRKPSDLLDKTSFENAVALVTALGGSTNAVLHLLAMAHAANVEFTLDDIAAVSERTPYLADLKPSGKYVMSDLHAVGGTPAVIKMLIAAGLMDGSRPTVTGRTLAE
type: DOMAIN
name: ILV_EDD_N
description: Dihydroxy-acid/6-phosphogluconate dehydratase, N-terminal
Protein sequence:
MKERKYFGTDGVRGLVGEHPINPEFAMKLGWAAGRVLSENGTKKVMIGKDTRISGYMLETALQAGLIAAGIDVVLLGPMPTPAIAYLAQTFRAEAGIVISASHNPYYDNGIKFFNCRGLKLDDKVELEIEAMLDEPMTCVESDKLGKASRLTSADGRYIEFCKSQFPQSLSLEGLKIVLDCANGATYHIAPSVMRELGANIITHACEPNGVNINHECGATHVDTLKRKVLEHNADVGIAYDGDGDRVMMVDHNGRVFDGDDLVYIIACQAAQDDNLGGGVVGTVMSNMGLENALKAKGIEFARSKVGDRYVMELLQQKGWTIGGESSGHVLNLDLISTGDGIISSLQVLAAMVAQNKTLQDLGTGFTKYPMKMINVRYTPGTDPTKAPAVLAAVAEVEQTLGEKGRVLLRKSGTEPVVRVMVEAEQEKLVIDSAEKIAAVVESMSKQTD

Annotated regions:
phrase: GIVISASHN
type: CONSERVED_SITE
name: A-D-PHexomutase_CS
description: Alpha-D-phosphohexomutase, conserved site

phrase: MINVRYTPGTDPTKAPAVLAAVAEVEQTLGEKGRVLLRKSGTEPVVRVMVEAEQEKLVIDSAEKIA
type: DOMAIN
name: A-D-PHexomutase_C
description: Alpha-D-phosphohexomutase, C-terminal

phrase: RKYFGTDGVRGLVGEHPINPEFAMKLGWAAGRVLSENGTKKVMIGKDTRISGYMLETALQAGLIAAGIDVVLLGPMPTPAIAYLAQTFRAEAGIVISASHNPYYDNGIKFFNCRGLKLDDKVELEIEAMLD
type: DOMAIN
name: A-D-PHexomutase_a/b/a-I
description: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I

phrase: DGDDLVYIIACQAAQDDNLGGGVVGTVMSNMGLENALKAKGIEFARSKVGDRYVMELLQQKGWTIGGESSGHVLNLDLISTGDGIISSLQVLAAMVAQNKTLQDL
type: DOMAIN
name: A-D-PHexomutase_a/b/a-III
description: Alpha-D-phosphohexomutase, alpha/beta/alpha domain III

phrase: RYIEFCKSQFPQSLSLEGLKIVLDCANGATYHIAPSVMRELGANIITHACEPNGVNINHECGATHVDTLKRKVLEHNADVGIAYDGDGDRVMMVDHN
type: DOMAIN
name: A-D-PHexomutase_a/b/a-II
description: Alpha-D-phosphohexomutase, alpha/beta/alpha domain II
Protein sequence:
MLRAKNQLFLLSPHYLRQVKESSGSRLIQQRLLHQQQPLHPEWAALAKKQLKGKNPEDLIWHTPEGISIKPLYSKRDTMDLPEELPGVKPFTRGPYPTMYTFRPWTIRQYAGFSTVEESNKFYKDNIKAGQQGLSVAFDLATHRGYDSDNPRLRGDVGMAGVAIDTVEDTKILFDGIPLEKMSVSMTMNGAVIPVLATFIVTGEEQGVPKEKLTGTIQNDILKEFMVRNTYIFPPEPSMKIIADIFQYTAKHMPKFNSISISGYHMQEAGADAILELAYTIADGLEYCRTGLQAGLTIDEFAPRLSFFWGIGMNFYMEIAKMRAGRRLWAHLIEKMLQPKNSKSLLLRAHCQTSGWSLTEQDPYNNIIRTTIEAMAAVFGGTQSLHTNSFDEALGLPTVKSARIARNTQIIIQEESGIPKVADPWGGSYMMESLTNDIYDAALKLINEIEEMGGMAKAVAEGIPKLRIEECAARRQARIDSGSEVIVGVNKYQLEKEESVDVLAIDNTSVRNKQIEKLKKVKSSRDQALAERCLDALTACAASGDGNILALAVDATRARCTVGEITYAMKKVFGEHKANDRMVSGAYRQEFGESKEIAFAIKRVEKFMEREGRRPRLLVAKMGQDGHDRGAKVIATGFADLGFDVDIGPLFQTPREVAQQAVDADVHTVGVSTLAAGHKTLVPELIKELNALGRPDILVMCGGVIPPQDYEFLFEVGVSNVFGPGTRIPKAAVQVLDDIEKCLEKKQQSI

Annotated regions:
phrase: WHTPEGISIKPLYSKRDTMDLPEELPGVKPFTRGPYPTMYTFRPWTIRQYAGFSTVEESNKFYKDNIKAGQQGLSVAFDLATHRGYDSDNPRLRGDVGMAGVAIDTVEDTKILFDGIPLEKMSVSMTMNGAVIPVLATFIVTGEEQGVPKEKLTGTIQNDILKEFMVRNTYIFPPEPSMKIIADIFQYTAKHMPKFNSISISGYHMQEAGADAILELAYTIADGLEYCRTGLQAGLTIDEFAPRLSFFWGIGMNFYMEIAKMRAGRRLWAHLIEKMLQPKNSKSLLLRAHCQTSGWSLTEQDPYNNIIRTTIEAMAAVFGGTQSLHTNSFDEALGLPTVKSARIARNTQIIIQEESGIPKVADPWGGSYMMESLTNDIYDAALKLINEIEEMGGMAKAVAEGIPKLRIEECAARRQARIDSGSEVIVGVNKYQLEKEESVDVLAIDNTSVRNKQIEKLKKVKSSRDQALAERCLDALTACAASGDGNILALAVDATRARCTVGEITYAMKKVFGEHKANDR
type: DOMAIN
name: MMCoA_mutase_a_cat
description: Methylmalonyl-CoA mutase, alpha chain, catalytic

phrase: RLLVAKMGQDGHDRGAKVIATGFADLGFDVDIGPLFQTPREVAQQAVDADVHTVGVSTLAAGHKTLVPELIKELNALGRPDILVMCGGVIPPQDYEFLFEVGVSNVFGPGTR
type: DOMAIN
name: Cobalamin-bd
description: Cobalamin (vitamin B12)-binding domain

phrase: RIARNTQIIIQEESGIPKVADPWGG
type: DOMAIN
name: MeMalonylCoA_mutase_a/b_cat
description: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic

phrase: RPRLLVAKMGQDGHDRGAKVIATGFADLGFDVDIGPLFQTPREVAQQAVDADVHTVGVSTLAAGHKTLVPELIKELNALGRPDILVMCGGVIPPQDYEFLFEVGVSNVFGPGTRIPKAAVQVLDDIEKCLEK
type: DOMAIN
name: Cobalamin-bd
description: Cobalamin (vitamin B12)-binding domain

phrase: RRPRLLVAKMGQDGHDRGAKVIATGFADLGFDVDIGPLFQTPREVAQQAVDADVHTVGVSTLAAGHKTLVPELIKELNALGRPDILVMCGGVIPPQDYEFLFEVGVSNVFGPGTRIPKAAVQVLDDIEKC
type: DOMAIN
name: Acid_CoA_mut_C
description: Methylmalonyl-CoA mutase, C-terminal

phrase: TPEGISIKPLYSKRDTMDLPEELPGVKPFTRGPYPTMYTFRPWTIRQYAGFSTVEESNKFYKDNIKAGQQGLSVAFDLATHRGYDSDNPRLRGDVGMAGVAIDTVEDTKILFDGIPLEKMSVSMTMNGAVIPVLATFIVTGEEQGVPKEKLTGTIQNDILKEFMVRNTYIFPPEPSMKIIADIFQYTAKHMPKFNSISISGYHMQEAGADAILELAYTIADGLEYCRTGLQAGLTIDEFAPRLSFFWGIGMNFYMEIAKMRAGRRLWAHLIEKMLQPKNSKSLLLRAHCQTSGWSLTEQDPYNNIIRTTIEAMAAVFGGTQSLHTNSFDEALGLPTVKSARIARNTQIIIQEESGIPKVADPWGGSYMMESLTNDIYDAALKLINEIEEMGGMAKAVAEGIPKLRIEECAARRQARIDSGSEVIVGVNKYQLEKEESVDVLAIDNTSVRNKQIEKLKKVKSSRDQALAERCLDALTACAASGDGNILALAVDATRARCTVGEITYAMKKVF
type: DOMAIN
name: MeMalonylCoA_mutase_a/b_cat
description: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic
Protein sequence:
MGSTGETQMTPTQVSDEEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPNDLASQLPTKNPEAPVMLDRMLRLLASYSILTYSLRTLPDGKVERLYGLGPVCKFLTKNEDGVSIAALCLMNQDKVLVESWYHLKDAVLDGGIPFNKAYGMTAFDYHGTDPRFNKVFNKGMADHSTITMKKILETYKGFEGLTSIVDVGGGTGAVVNMIVSKYPSIKGINFDLPHVIEDAPQYPGVQHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDTSLATKGVVHIDVVMLAHNPGGKERTEQEFEALAKGSGFQGIRVACNAFNTYVIEFLKKI

Annotated regions:
phrase: WYHLKDAVLDGGIPFNKAYGMTAFDYHGTDPRFNKVFNKGMADHSTITMKKILETYKGFEGLTSIVDVGGGTGAVVNMIVSKYPSIKGINFDLPHVIEDAPQYPGVQHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDTSLATKGVVHIDVVMLAHNPGGKERTEQEFEALAKGSGF
type: DOMAIN
name: O_MeTrfase_dom
description: O-methyltransferase domain

phrase: DEEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPNDLASQLPTKNPEAPVMLDRMLRLLASYSILTYSLRTLPDGKVERLYGLGPVCKFLT
type: DOMAIN
name: Plant_O-MeTrfase_dimerisation
description: Plant O-methyltransferase dimerisation domain
Protein sequence:
MDRIHITGGAPLHGEIPISGAKNAALPLMIASLLTGETVELANVPRLADIASLLRILGNHGVDHMVVGKRPGQTAETGQTIRLTASNVIDTTAPYELVSTMRASFWVIAPLLARFGEARVSMPGGCAIGTRPVDLLLMAMERLGATIEIDGGYVVARTRNGLRGAEIVFPKVTVGGTHVALMAASLAQGTTVIDNAAREPEVVDLAECLSKMGARIEGAGTPRIVVEGVSRLGGARHEVLPDRIETGTYAMAVAMTGGDVILRDTRADLLHSALDVLATTGTEVTALPNGIRVRRNGAGVAAVDVTTDPFPGFPTDLQAQFMALMTKARGQSRIRETIFENRFMHVQELARLGARIRLEGDLAVVDGVERLRGAPVMATDLRASVSLVIAGLAAEGETIINRVYHLDRGFEALEAKLSRCGAQIRRERV

Annotated regions:
phrase: TGGAPLHGEIPISGAKNAALPLMIASLLTGETVELANVPRLADIASLLRILGNHGVDHMVVGKRPGQTAETGQTIRLTASNVIDTTAPYELVSTMRASFWVIAPLLARFGEARVSMPGGCAIGTRPVDLLLMAMERLGATIEIDGGYVVARTRNGLRGAEIVFPKVTVGGTHVALMAASLAQGTTVIDNAAREPEVVDLAECLSKMGARIEGAGTPRIVVEGVSRLGGARHEVLPDRIETGTYAMAVAMTGGDVILRDTRADLLHSALDVLATTGTEVTALPNGIRVRRNGAGVAAVDVTTDPFPGFPTDLQAQFMALMTKARGQSRIRETIFENRFMHVQELARLGARIRLEGDLAVVDGVERLRGAPVMATDLRASVSLVIAGLAAEGETIINRVYHLDRGFEALEAK
type: DOMAIN
name: Enolpyruvate_Tfrase_dom
description: Enolpyruvate transferase domain
Protein sequence:
MKSLEELYNRAIEMKNKGMSDKEISTELHLSVNTVTWLLSKEFVNERSAKDVKIGWRSAGVFGSRIGSLAEIMIDIAEEESNKMNLNIDAFLGITINGIPFATLASYMTGKELIVYRPHPSRKEGFFSSNFASVVNKNVVIMDDVVSTGETMKRTIEDVKKSGGKPVLCIVIASKLNIDEINGVKIRAIMRTVMV

Annotated regions:
phrase: MIDIAEEESNKMNLNIDAFLGITINGIPFATLASYMTGKELIVYRPHPSRKEGFFSSNFASVVNKNVVIMDDVVSTGETMKRTIEDVKKSGGKPVLCIVIASK
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: EIMIDIAEEESNKMNLNIDAFLGITINGIPFATLASYMTGKELIVYRPHPSRKEGFFSSNFASVVNKNVVIMDDVVSTGETMKRTIEDVKKSGGKPVLCIVIAS
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain
Protein sequence:
MEILNGPSGWIEVICGGMYSGKSEELIRRVRRAQIAKQKVQVFKHSLDIRYDKDYVASHTGLKIEAIPVSSSADIERLVEDDTQVVAIEEGQFFDMGIVKVCQRLADKGKRVIVAGLDQDFRGEPFGPMPYLMAVAEYVDKLHAICMKCGNVASRTQRIIDGKPAYYDDPIILVGAFETYEARCRNCHIVLRRDENEK

Annotated regions:
phrase: GAFETYEARCRNC
type: CONSERVED_SITE
name: Thymidine_kinase_CS
description: Thymidine kinase, conserved site
Protein sequence:
MEKITVTLGERSYPITIASGLFHQPETFLPLKKGQQVMIVTNVTLAPLYLDKVTNTLEQQGVLVDSVILPDGEQYKSLTVMNDVFTALLEKNHNRDTTLLALGGGVIGDLTGFAAASYQRGVRFIQVPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQPASVVIDLDCLATLPPRELSSGLAEVIKYGIILDKDFFIWLENNIDKLIALEPKAMAYCIRRCCELKAQVVAADEKETSGLRALLNLGHTYGHAIEAHMGYGVWLHGEAVAAGMVMAAKTAQDLGQFTQAETQRVIQLLKKANLPVNGPDEMQPEDYLPHMMRDKKVSAGKLHLVLPKGIGQSELRADISREQVYKAITSCINAN

Annotated regions:
phrase: GLAEVIKYGIILDKDFFIWLENNIDKLIALEPKAMAYCIRRCCELKAQVVAADEKETSGLRALLNLGHTYGHAIEAHMGYGVWLHGEAVAAGMVMAAKTAQDLGQFTQAETQRVIQLLKKANLPVNGPDEMQPEDYLPHMMRDKK
type: DOMAIN
name: DHQS_C
description: 3-dehydroquinate synthase, C-terminal domain

phrase: VILPDGEQYKSLTVMNDVFTALLEKNHNRDTTLLALGGGVIGDLTGFAAASYQRGVRFIQVPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQPASVVIDLDCLATLPPREL
type: DOMAIN
name: DHQS/DOIS_N
description: 3-dehydroquinate synthase, N-terminal domain
Protein sequence:
MTTATTTLQHLAEIANARTVNPPSAPMPVSFIGLDSSNLEPGGLFAALPGTRVHGATYAFDSAAGAILTDKAGLAIIQQTADRRPVLVVEDVRAILGRVAAEVYGHPSQSFTLLGITGTSGKTTTTYMLEKGLSAAGCKVGLIGTTGTKIKGRDVATELTTPEAPMLQRLFAQMRDEGVTHVVMEVSSHALMLGRVAGADFDIAGFTNLSQDHLDFHPSMEDYFQAKALFFSPESELRAKRSVICVDDEWGLRMAALAADPVTVGTTTGADITAELVSIDDQGSQRIRLDAADTYEFTLPMPGAFNVANAALAAAMAQTAGVDLRAFLGGLEQAAVPGRMERIDEGQPFVAVVDYAHKPAAIGAVLATLRGQVEGRIGVVVGAGGDRDTSKRPLMGAEAARGADLVVVTDDNPRTEDPASIRAAVLQGARGAGTDATIEEVGPRGEAIDAVVAWAQPGDAVIVVGKGHEVGQLVGTQKLHFDDREEMRRAIRERGVRA

Annotated regions:
phrase: VSFIGLDSSNLEPGGLFAALPGTRVHGATYAFDSAAGAILTDKAGLAIIQQTADRRPVLVVEDVRAILGRVAAE
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: GRMERIDEGQPFVAVVDYAHKPAAIGAVLATLRGQVEGRIGVVVGAGGDRDTSKRPLMGAEAARGADLVVVTDDNPRTEDPASIRAAVLQGARGAGTDATIEEVGPRGEAIDAVVAWAQPGDAVIVVGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: ITGTSGKTTTTYMLEKGLSAAGCKVGLIGTTGTKIKGRDVATELTTPEAPMLQRLFAQMRDEGVTHVVMEVSSHALMLGRVAGADFDIAGFTNLSQDHLDFHPSMEDYFQAKALFFSPESELRAKRSVICVDDEWGLRMAALAADPVTVGTTTGADITAELVSIDDQGSQRIRLDAADTYEFTLPMPGAFNVANAALAAAM
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central
Protein sequence:
MNFVISQHFNEIKYRFLYIFFTFLLCFIICTIYSESIMFFYVHPLINLTSMQGKHLIFTEMSEAFHTYIFLCFFTSIYCTFPYFFYQFWAFFIPSTYQFERLQLRFLSFFFFTLLFFSCIIIYFIILPEIWSFFLHFEKKSYYFNLQLEARISSYIQFTFQIFSYFFVLFQCPLFTHFSLNLNLLTISFLVNSRKYIYFLFLILAAFLSPPDILSQFFLFSLIVFMYELCVFYSCFYDSLRERIKTF

Annotated regions:
phrase: YIQFTFQIFSYFFVLFQCP
type: CONSERVED_SITE
name: Sec-indep_translocase_CS
description: Sec-independent periplasmic protein translocase, conserved site
Protein sequence:
MRLSTPNLQLNEQGKLRHFLTIEGLKQHHLTEILDVAESFINPVTGDISKVPSLHGKTIMNLFFEPSTRTLTTFEIAEKRLSADVVNLNIETSSTKKGETLLDTLWNLEAMLADVFVVRHSESGAAHFIAKHVAPHVHVVNAGDGQHAHPTQAMLDMFTIRKHKGDIFDLKVAIIGDVQHSRVVRSQIQALSILEAREIRVIGPKTLMPSHPEALGVHVYDHIEEGLDGVDVIINVRLQNERMKSALLPSEKEFFNLYGLTKERLSYAKPDAIVMHPGPVNRGVEIDSEVADGHQSVILEQVTYGIAVRMAVMSIIIDNAKQLNADKQITKKVTEEARS

Annotated regions:
phrase: RHFLTIEGLKQHHLTEILDVAESFINPVTGDISKVPSLHGKTIMNLFFEPSTRTLTTFEIAEKRLSADVVNLNIETSSTKKGETLLDTLWNLEAMLADVFVVRHSESGAAHFIAKHVAPHVHVVNAGDGQHAHPTQAMLDMFTI
type: DOMAIN
name: Asp/Orn_carbamoyltranf_P-bd
description: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding

phrase: DLKVAIIGDVQHSRVVRSQIQALSILEAREIRVIGPKTLMPSHPEALGVHVYDHIEEGLDGVDVIINVRLQNERMKSALLPSEKEFFNLYGLTKERLSYAKPDAIVMHPGPVNRGVEIDSEVADGHQSVILEQVTYGIAVRMAVMS
type: DOMAIN
name: Asp_carbamoyltransf_Asp/Orn-bd
description: Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain
Protein sequence:
MIRNSTKPAKAAPGKAKTTPKAAKSAATSSKATGTAQAVKASPAKGLGKGVIAVAPPSFRRERALIKRGIWPVAGCDEAGRGPLAGPVVAAAVVLDPKRVPKGLDDSKRLSAEKREELFEEICASAQVSVACASPERINRDNILRASLWALTRAVHALPDLPQHVFVDGRDRLATRCESEAVIGGDGLIASIAAASIIAKVTRDRLMCRLAQDCPGYGFEQHKGYGVPEHLAALARLGPSVHHRRFFAPVAAAWQKIEGAPAEPTGLTGDLFGTPADSGHAATL

Annotated regions:
phrase: AGCDEAGRGPLAGPVVAAAVVLDPKRVPKGLDDSKRLSAEKREELFEEICASAQVSVACASPERINRDNILRASLWALTRAVHALPDLPQHVFVDGRDRLATRCESEAVIGGDGLIASIAAASIIAKVTRDRLMCRLAQDCPGYGFEQHKGYGVPEHLAALARLGPSVHHRRFFA
type: DOMAIN
name: RNase_HII/HIII_dom
description: Ribonuclease HII/HIII domain

phrase: WPVAGCDEAGRGPLAGPVVAAAVVLDPKRVPKGLDDSKRLSAEKREELFEEICASAQVSVACASPERINRDNILRASLWALTRAVHALPDLPQHVFVDGRDRLATRCESEAVIGGDGLIASIAAASIIAKVTRDRLMCRLAQDCPGYGFEQHKGYGVPEHLAALARLGPSVHHRRFFAPVAAAWQKIE
type: DOMAIN
name: RNase_HII/HIII_dom
description: Ribonuclease HII/HIII domain
Protein sequence:
MKRVGFVGWRGMVGSVLMERMRAENDFAQIVEPVFFTTSQVGQPGPDVGHGTAPLLDAESLDALRELDVIVTCQGGDYTKSIHPRLRASGWNGYWIDAASALRMEPDATIILDPVNRSVIDAALAANKRDFIGGNCTVSLMLMAIGGLFKADLIEWVSAMTYQAASGAGAKNMRELLAQMGALHRSVAPLLDDPASAILDIDRHVTATLRAPDFPTTSFGVPLAGSLIPWIDTQLDNGQSREEWKGQAETNRILGRTEQPIPVDGLCVRIGAMRCHSQGLTIKLNRDVPMHDIEALIAEANDWVRVIPNDRTTTLHELSPAAVTGSLQIPVGRLRPMNLGSRYLSAFTVGDQLLWGAAEPVRRMLMILLDR

Annotated regions:
phrase: VDGLCVRIGAMRCH
type: CONSERVED_SITE
name: Asp-semialdehyde_DH_CS
description: Aspartate-semialdehyde dehydrogenase, conserved site

phrase: GLFKADLIEWVSAMTYQAASGAGAKNMRELLAQMGALHRSVAPLLDDPASAILDIDRHVTATLRAPDFPTTSFGVPLAGSLIPWIDTQLDNGQSREEWKGQAETNRILGRTEQPIPVDGLCVRIGAMRCHSQGLTIKLNRDVPMHDIEALIAEANDWVRVIPNDRTTTLHELSPAAVTGSLQIPVGRLRPMNLGSRYLSAFTVGDQLL
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: RVGFVGWRGMVGSVLMERMRAENDFAQIVEPVFFTTSQVGQPGPDVGHGTAPLLDAESLDALRELDVIVTCQGGDYTKSIHPRLRASGWNGYWIDAASALRMEPDATIILDPVNRSVIDA
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: RVGFVGWRGMVGSVLMERMRAENDFAQIVEPVFFTTSQVGQPGPDVGHGTAPLLDAESLDALRELDVIVTCQGGDYTKSIHPRLRASGWNGYWIDAASALRMEPDATIILDPVNRSVID
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MNVGKLQPVRGTRDLLPEECYKFWHIRDVAHDIGERYGFVPVETPIFEFQDVFLKTLGDSSDIIGKEMYSFPDRGGDVLVLRPELTAAVARMLICERLTLPARLFTFGPVFRYERPQKCRQRQFHQINYEHFGAGCTADAELMALAYDILGALNLRSEVQLEINSLGNQDSILGYRNSLLKYFEKHEHALSEDSRRRLQTNPLRILDSKDRGDIAILCGAPVIADFYDDESNMTFNGVMQQLDNLGIPYTVNPRLVRGLDYYCGTVFEFKTTSLGSQDAVIAGGRYDKLVASMGGGDVPAVGFAGGVERLASLAAYSHSTRFSVAFLPLGEEAARCAMRSAYELRGRGIRVLCDGVVEKLKIGLKHADRSGVDLALILGDEEIAKGEVLCRHMDTGLQQTVSISNLGDYVSGMESNAQGNNRAALSSAGE

Annotated regions:
phrase: GTRDLLPEECYKFWHIRDVAHDIGERYGFVPVETPIFEFQDVFLKTLGDSSDIIGKEMYSFPDRGGDVLVLRPELTAAVARMLICERLTLPARLFTFGPVFRYERPQKCRQRQFHQINYEHFGAGCTADAELMALAYDILGALNLRSEVQLEINSLGNQDSILGYRNSLLKYFEKHEHALSEDSRRRLQTNPLRILDSKDRGDIAILCGAPVIADFYDDESNMTFNGVMQQLDNLGIPYTVNPRLVRGLDYYCGTVFEFKTTSLGSQDAVIAGGRYDKLVASMGGGDVPAVGFAGGVER
type: DOMAIN
name: HisRS-like_core
description: Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain

phrase: ECYKFWHIRDVAHDIGERYGFVPVETPIFEFQDVFLKTLGDSSDIIGKEMYSFPDRGGDVLVLRPELTAAVARMLICERLTLPARLFTFGPVFRYERPQKCRQRQFHQINYEHFGAGCTADAELMALAYDILGALNLRSEVQLEINSLGNQDSILGYRNSLLKYFEKHEHALSEDSRRRLQTNPLRILDSKDRGDIAILCGAPVIADFYDDESNMTFNGVMQQLDNLGIPYTVNPRLVRGLDYYCGTVFEFKTTSLGSQDAVIAGGRYDKLVASMGGGDVPAVGFAGGVERLAS
type: DOMAIN
name: HisRS-like_core
description: Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain

phrase: VAFLPLGEEAARCAMRSAYELRGRGIRVLCDGVVEKLKIGLKHADRSGVDLALILGDEEIAKGEVLCRHMDTGLQQTVSISNLGDYV
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: ERYGFVPVETPIFEFQDVFLKTLGDSSDIIGKEMYSFPDRGGDVLVLRPELTAAVARMLICERLTLPARLFTFGPVFRYERPQKCRQRQFHQINYEHFGAGCTADAELMALAYDILGALNLRSEVQLEINSLGNQDSILGYRNSLLKYFEKHEHALSEDSRRRLQTNPLRILDSKDRGDIAILCGAPVIADFYDDESNMTFNGVMQQLDNLGIPYTVNPRLVRGLDYYCGTVFEFKTTSLGSQDAVIAGGRYDKLVASMGGGDVPAVGFAGGVERLASLAAYSHSTRFSVAFL
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II
Protein sequence:
MFRYININMNSITAIVVAAGRGTRAGSGIPKQYREIAQKPILHYTIDALLAHKAIDNIICVIHKDDKQLYKNAVSRINNPRLSKPVLGGATRSESVFNGIKAASSEYVLIHDGARPCLPIAALKRLINGLEKYNACFLALPIVDTLWSISENKVQKNISREMIWKAQTPQAFKLNEIYNAYENTNKTLTDDVAIAQSAGIEVTPILGAEENIKITTQNDFGLARQIIGNIMDIRVGNGYDVHALGLGSSVTLNGIEISHTKALLGHSDADVAMHAITDAIFGALSAGDIGQWFPPSEQKWKNASSEIFLRKAVLLCKERGFIINHLDCTIICETPKIGPHAEKMRENISEITKIDIDKVSVKATTTEQLGFTGRNEGIAAQATATLIKK

Annotated regions:
phrase: IRVGNGYDVHALGLGSSVTLNGIEISHTKALLGHSDADVAMHAITDAIFGALSAGDIGQWFPPSEQKWKNASSEIFLRKAVLLCKERGFIINHLDCTIICETPKIGPHAEKMRENISEITKIDIDKVSVKATTTEQLGFTGRNEGIAAQATATLI
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RVGNGYDVHALGLGSSVTLNGIEISHTKALLGHSDADVAMHAITDAIFGALSAGDIGQWFPPSEQKWKNASSEIFLRKAVLLCKERGFIINHLDCTIICETPKIGPHAEKMRENISEITKIDIDKVSVKATTTEQLGFTGRNEGIAAQATATLI
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: SDADVAMHAITDAIF
type: CONSERVED_SITE
name: MECDP_synthase_CS
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site

phrase: VLIHDGA
type: CONSERVED_SITE
name: ISPD_synthase_CS
description: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site

phrase: RVGNGYDVHALGLGSSVTLNGIEISHTKALLGHSDADVAMHAITDAIFGALSAGDIGQWFPPSEQKWKNASSEIFLRKAVLLCKERGFIINHLDCTIICETPKIGPHAEKMRENISEITKIDIDKVSVKATTTEQLGFTGRNEGIAAQATAT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: IRVGNGYDVHALGLGSSVTLNGIEISHTKALLGHSDADVAMHAITDAIFGALSAGDIGQWFPPSEQKWKNASSEIFLRKAVLLCKERGFIINHLDCTIICETPKIGPHAEKMRENISEITKIDIDKVSVKATTTEQLGFTGRNEGIAAQATAT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: KITTQNDFGLARQIIGNIMDIRVGNGYDVHALGLGSSVTLNGIEISHTKALLGHSDADVAMHAITDAIFGALSAGDIGQWFPPSEQKWKNASSEIFLRKAVLLCKERGFIINHLDCTIICETPKIGPHAEKMRENISEITKIDIDKVSVKATTTEQLGFTGRNEGIAAQATATLIK
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Protein sequence:
MSCVGKLPIIIPEGVKVGLNDLEVKISGPKGELSKSFKGSIGISLAENKLLVKPLSSSKSARAMWGTARSIISNMVTGVKEGFKLKLEINGVGYRAMMKGKYLNLMLAKSHNTKIEIPSHIKVEVPKQNIIILEGTDKEKLGQFASIIIKQRPPEPYKGKGIKFEDQFIPCKEGKKN

Annotated regions:
phrase: PEPYKGKG
type: CONSERVED_SITE
name: Ribosomal_uL6_CS
description: Large ribosomal subunit protein uL6, conserved site

phrase: IPEGVKVGLNDLEVKISGPKGELSKSFKGSIGISLAENKLLVKPLSSSKSARAMWGTARSIISNMVTGVKE
type: DOMAIN
name: Ribosomal_uL6_a/b-dom
description: Large ribosomal subunit protein uL6, alpha-beta domain

phrase: GVGYRAMMKGKYLNLMLAKSHNTKIEIPSHIKVEVPKQNIIILEGTDKEKLGQFASIIIKQRPPEPYKGKGI
type: DOMAIN
name: Ribosomal_uL6_a/b-dom
description: Large ribosomal subunit protein uL6, alpha-beta domain
Protein sequence:
MESMKNILDLKIDELQDYFARLGEPAFRVKQVYQGLYQKGYERFDEFTTLSRSLRQRLAEDFVLRSFKELDRITSPLDGTTKLLWQLSDGMKIESVIIYEKKRVTFCISSQIGCALDCKFCATGKMGWLRDLTVGEIVEQVLQMKKLAERPPTNIVFMGMGEPMLNYDNVMRAAEILADEGGLNFSRKKITISTSGIIPGIKRMADEGRPFRLAISLNAADQQKRLQTMPIAKKYPLEQLLKAAQYYYQKTRKRITFEYVLIAGFNDSIEDAKKLVKISRQVPCKINVIPVNSIDDHFPAPSQESLERFEEAIQESVYAVTVRNRKGWDIQAACGMLYAANEKQKIKPEKLSLTDQAH

Annotated regions:
phrase: VTFCISSQIGCALDCKFCATGKMGWLRDLTVGEIVEQVLQMKKLAERPPTNIVFMGMGEPMLNYDNVMRAAEILADEGGLNFSRKKITISTSGIIPGIKRMADEGRPFRLAISLNAADQQKRLQTMPIAKKYPLEQLLKAAQYYYQKTRKRITFEYVLIAGFNDSIEDAKKLVKISRQVPCKINVIPVNSIDDHFPAPSQESLERFEEAIQESVYAVTV
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: SSQIGCALDCKFCATGKMGWLRDLTVGEIVEQVLQMKKLAERPPTNIVFMGMGEPMLNYDNVMRAAEILADEGGLNFSRKKITISTSGIIPGIKRMADEGRPFRLAISLNAADQQKRLQTMPIAKKYPLEQLLKAAQYYYQKTRKRITFEYVLIAGFNDSIEDAKK
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: EKKRVTFCISSQIGCALDCKFCATGKMGWLRDLTVGEIVEQVLQMKKLAERPPTNIVFMGMGEPMLNYDNVMRAAEILADEGGLNFSRKKITISTSGIIPGIKRMADEGRPFRLAISLNAADQQKRLQTMPIAKKYPLEQLLKAAQYYYQKTRKRITFEYVLIAGFNDSIEDAKKLVKISRQVPCKINVIPVNSIDDHFPAPSQESLERFEEAIQESVYAVTV
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: NILDLKIDELQDYFARLGEPAFRVKQVYQGLYQKGYERFDEFTTLSRSLRQRLAED
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MRVKEIRKNCQRLWTWGTMLLGILMICSTAEQLWVTVYYGVPVWRDANTTLFCASDAKAHDTEVHNVWATHACVPTDPNPQEVVLANVTENFNMWKNNMVDQMHEDIINLWDQSLKPCVKLTPLCVTLNCTDVNITSTNTTNTNSSRWGEMEQGEIKNCSFNITTSIKDKVQKEYALFYKLDVVSIDNSSTSYRLISCNTSVLTQACPKITFDPLPIHYCAPAGFAIIKCNDNRFNGTGPCKNVSTVQCTHGIKPVVSTQLLLNGSLAEEEVVIRSENFTNNAKTIIVQLNETVEIKCTRPSNNTRKSINIGPGRAFHVTGEIIGDIRQAHCNISRTQWNNTLKRIAIKLREQFGNKTIAFNRSSGGDPEIVMHSFNCRGEFFYCNTTRLFNSTWNGNDTWNENSTENDTITLPCRIKQIVNMWQEVGKAMYAPPIRGNITCSSNITGLLLTRDGGANSNNTEIFRPGGGDMRDNWRSELYKYKVVRIDPLGVAPTKAKRRVVQREKRAVGLGAVFLGFLGAAGSTMGAASLTLTVQARQLLSGIVQQQNDLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICTTAVPWNNSWSNKSHTDIWNNMTWMEWEREIDNYTGLIYNLLEQSQNQQEKNEQELLELDQWANLWNWFDITKWLWYIKIFIMIVAGLVGLRIVFAVLSIVNRVRQGYSPLSFQTRRPVRRGPDRPEGIEEEGGEQDNDRSGPLVDGFLALIWGDLRSLCLFSYHRL

Annotated regions:
phrase: VQARQLLSGIVQQQNDLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICTTAVPWNNSWSNKSHTDIWNNMTWMEWEREIDNYTGLIYNLLEQSQNQQEKNEQELLELD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASLTLTVQARQLLSGIVQQQNDLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICTTAVPWNNSWSNKSHTDIWNNMTWMEWEREIDNYTGLIYNLLEQSQNQQEKNEQELLELDQWANLWNWFDITKWLWYIKIFIMIVAGLVGLRIVFAVLSIVNRVRQGYSPLSFQ
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWRDANTTLFCASDAKAHDTEVHNVWATHACVPTDPNPQEVVLANVTENFNMWKNNMVDQMHEDIINLWDQSLKPCVKLTPLCVTLNCTDVNITSTNTTNTNSSRWGEMEQGEIKNCSFNITTSIKDKVQKEYALFYKLDVVSIDNSSTSYRLISCNTSVLTQACPKITFDPLPIHYCAPAGFAIIKCNDNRFNGTGPCKNVSTVQCTHGIKPVVSTQLLLNGSLAEEEVVIRSENFTNNAKTIIVQLNETVEIKCTRPSNNTRKSINIGPGRAFHVTGEIIGDIRQAHCNISRTQWNNTLKRIAIKLREQFGNKTIAFNRSSGGDPEIVMHSFNCRGEFFYCNTTRLFNSTWNGNDTWNENSTENDTITLPCRIKQIVNMWQEVGKAMYAPPIRGNITCSSNITGLLLTRDGGANSNNTEIFRPGGGDMRDNWRSELYKYKVVRIDPLGVAPTKAKRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MILKLNGYGYSSNSYLIIGKKNILIDPGTSGTFNILMEELERNGIKDIDLIINTHCHFDHTSADYLIEEYFNCPTIIEDKEVKHLKNGDEVTVSSLFGAKLNPPKEIIPLSEIEEELKSYGLEIIRTPGHTYGSISIIYENSLITGDTIFAYGVGRWDLPTGDVIQLRNSINLLERIANERNIDKLYPGHGEIGDRMAFSYAKLFI

Annotated regions:
phrase: GYSSNSYLIIGKKNILIDPGTSGTFNILMEELERNGIKDIDLIINTHCHFDHTSADYLIEEYFNCPTIIEDKEVKHLKNGDEVTVSSLFGAKLNPPKEIIPLSEIEEELKSYGLEIIRTPGHTYGSISIIYENSLITGDTIFAYGVGRWDLPTGDVIQLRNSINLLERIANERNIDKLYPG
type: DOMAIN
name: Metallo-B-lactamas
description: Metallo-beta-lactamase

phrase: SSNSYLIIGKKNILIDPGTSGTFNILMEELERNGIKDIDLIINTHCHFDHTSADYLIEEYFNCPTIIEDKEVKHLKNGDEVTVSSLFGAKLNPPKEIIPLSEIEEELKSYGLEIIRTPGHTYGSISIIYENSLITGDTIFAYGVGRWDLPTGDVIQLRNSINLLERIANERNIDKLYPG
type: DOMAIN
name: Metallo-B-lactamas
description: Metallo-beta-lactamase
Protein sequence:
MMLPNGFTAASCAAGLKSSGALDLTLIVNNGPIFAAAAVYTTNQVIAAPVIWSKQVTKEKIVRAAILNSGGANACTGPQGFADTHKTAEHVGEVLGISSGEVVVCSTGLIGELLPMQKIISGIDLIAKGLHQNAVEEVAKAIMTTDSVAKIANFKSEKFEVSGVAKGAGMLAPALATMLSVVMTDAILPDTAQEIFQRVCDRTYNRIDSDGCTSTNDTVLLMGSGASGFAPSETELEESLMSVCGSLSQQLIADAEGSTKTVAIKVSGAASESDAVEVARACARNNLLKCAIFGGDPNWGRVLAAVGTAQVRLNPLDMDVTLNGVQVAKSSAPFADRNLVSFANRLVTIDIDLKVGSASATVFTNDLSHDYVHENSAYAT

Annotated regions:
Protein sequence:
MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQGLSAWAVKAREYGIINHDVDNFAPRAFFSTLTNVNFDSPRIVGYAREAIALREALKAQCLSVDANAHCDNPMADLQLVSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLKGAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECAMEIGQMNFKVMSILDAGETTKYGHPTPTQVNVKATEGKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGSYDDRIWTRSIVGWPGVSHLEGDDFGPVIAQAQQMAGFPYSEIPHLITVGFGRQTLLGAADTLIDLVSREKLRHIFLVGGCDGARGERNYFTDFATSVPDDCLILTLACGKYRFNKLEFGDIEGLPRLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVKNIVTGPTAPGFFTPDLLAILNEKFGLRSVTTVEEDMKQLLSA

Annotated regions: