nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MNLKNLETCKGLIKGSYIDQAIQGTSQFNKLLETLLIHKKLPNIGYNDKIIELILNEISLMDSNNFIENIGVGEREGRIYSGLVEKRHYGFAHGIGRSGDITEQQPKAAGSSLIQKLTHSLVLDAMKLAGLEQSSLSNCLLLPMATGMTLALTMLTLKSINANNKRYVLWPRIDQKSCLKSIITAGLIPIVIPNQLDGDMIRTDLVAIEDKIKELGVDNILCVFSTTSCFAPRVPDKIIEISEICKRYNIGHIINNAYGLQCSKILHNISQACKLGRVDAFIQSTDKNFMVPVGGAIISGPNSEFIDQISRNYPGRANSSPILDVFITLLSMGKQGWLNLLKERKELLIYFNEQLSKFALENNEKLLNTINENKISFALTLSSNNFNNNEEIISNNNNNNNNTFSMIGSKLFSRSCSGSRVIDLKSNKKLLIGGLEFNNYGSHIDNYSTSYLTVACAIGITKLEIDTFIQRLSKLFNKK

Annotated regions:
Protein sequence:
MFAPQDIKGFSEENLVRWLVQYGIAPYRAGQILRWIYLRGVYSFAEMTDLSMDLRRFLAERLAISRLETELVQTSRDGARKYLFRLKDGQHIESVLIPEPGHWTLCISSQAGCAMGCKFCFTGRGGLVRNLEPSEIINQVCAVRDDLQEPSSLTNIVFMGMGEPLANYDAVVQGIRTITGNNGLQFSTRRVTLSTAGLVPRMDDLGRDVKVNLAVSLNAADNDTRNRLMPINRVYPVEMLLSACRAFPLPSRRMITFEYVLIAGVNDAPGDAERLAKLLRPLRAKINLIPFNAFEGTEFERPEETAILAFQKVLLDRHYTAIIRHSKGGDICAACGQLLPSTCKG

Annotated regions:
phrase: WTLCISSQAGCAMGCKFCFTGRGGLVRNLEPSEIINQVCAVRDDLQEPSSLTNIVFMGMGEPLANYDAVVQGIRTITGNNGLQFSTRRVTLSTAGLVPRMDDLGRDVKVNLAVSLNAADNDTRNRLMPINRVYPVEMLLSACRAFPLPSRRMITFEYVLIAGVNDAPGDAERLAKLLRPLRAKINLIPFNAFEGTEFERPEETAILAFQKVLLDRHY
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: SSQAGCAMGCKFCFTGRGGLVRNLEPSEIINQVCAVRDDLQEPSSLTNIVFMGMGEPLANYDAVVQGIRTITGNNGLQFSTRRVTLSTAGLVPRMDDLGRDVKVNLAVSLNAADNDTRNRLMPINRVYPVEMLLSACRAFPLPSRRMITFEYVLIAGVND
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: EPGHWTLCISSQAGCAMGCKFCFTGRGGLVRNLEPSEIINQVCAVRDDLQEPSSLTNIVFMGMGEPLANYDAVVQGIRTITGNNGLQFSTRRVTLSTAGLVPRMDDLGRDVKVNLAVSLNAADNDTRNRLMPINRVYPVEMLLSACRAFPLPSRRMITFEYVLIAGVNDAPGDAERLAKLLRPLRAKINLIPFNAFEGTEFERPEETAILAFQKVLLDRHYTAIIRHSKGG
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: DIKGFSEENLVRWLVQYGIAPYRAGQILRWIYLRGVYSFAEMTDLSMDLRRFLAERLA
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MKLILLILTAYLLGSIPTGLWIGQYFYNINLREHGSGNTGTTNTFRILGLKAGAATLLIDIFKGTLATLLPVLVGASNISPITIGFFAVLGHTFPIFAGFKGGKAVATSAGVLLGFAPLYLLFLAAVFVLTLYLFSMISLASLTASVVAVISVLTFPAAHFLLPSYDWLLTITIVVLAAIIILRHQDNMKRIKQQSENLIPWGLNLSKQQPASHH

Annotated regions:
Protein sequence:
MSAIAPGMILFAYLCGSISSAILVCRIAGLPDPRESGSGNPGATNVLRIGGKGAAVAVLIFDILKGMLPVWGAYALGITPFWLGLIAIAACLGHIWPVFFGFKGGKGVATAFGAIAPIGWDLTGVIAGTWLLTVLLSGYSSLGAIVSALIAPFYVWWFKPQFTFPVSMLSCLILLRHHDNIQRLWRRQETKIWTKLKKKREKESK

Annotated regions:
Protein sequence:
METQPASVPCVLPQDVYEFSEDRESLGRLRVSEMPSELNGGGDGSKGDGAAVVATEVSQQSNKKRKRCGVCVPCLRKEPCGTCYNCVNRSTSHQICKMRKCEQLKKKRVVPMKGVEAVDKDDAKNQAKEQVPSVKNCSESILVDGPKTDQMEAGPVNHVQEGRLKQECDSTLPSKGSEDLANQLLMEANSWLSNTAAPQDPCNKLNWDKPIIPNHIAANNNSNLEDAKNLVAFSAVAEAMSNYGMPASGTPSSISMQLYEKFNYETNQDNSGHSEGNAPSCPEDLNTLKEALALAKHGVKPPNCNCDGPECPDYLEWLENKIKSTGKGSQESPFPSLGQVSKKLVQKSYHKEQVLNLENTNVTCPSGNLPFSQNALSLAKEKNISLQTAIAIEALTQLSSALPQTNNEYPNAPSQPLINHNDQLTHFPTAKGNQLPMLPLSCNELFQNQQAQLYTGKNALPVPQSPRQASWEQNKKPGYQESEYIPENLSQSSSVLPSDASTPQKKEFLQQWVQNADLLKSPSDPMTGLKQLLGNTDEYIKSAFKGPEGLSKKIKNVKSKHTIKSIKKESADFTKMSPDQQLSQLLQGNDFHRNTQAALQQHLHHKRNLFVDSNTMEACTQEQQNWWVPNSQQAPVSKTTEKPVKERKKRRQSPSQKQVEPKPKPPRKQVQIKKPRVKEGNAVFMPVSQISLDSFRRVEKEENQVKELDLENSLPINVQPDLLGSQSIQLTGSQANLENQKTVNTQETCNENQTSIGKANNFALCVNK

Annotated regions:
phrase: SNKKRKRCGVCVPCLRKEPCGTCYNCVNRSTSHQICKMRK
type: DOMAIN
name: Znf_CXXC
description: Zinc finger, CXXC-type

phrase: SNKKRKRCGVCVPCLRKEPCGTCYNCVNRSTSHQICKMRKC
type: DOMAIN
name: Znf_CXXC
description: Zinc finger, CXXC-type
Protein sequence:
MPKLPPLSLYIHIPWCVQKCPYCDFNSHAQKSDIPEQDYIYHLLQDLQADLQRFKDSIQQRKLHSIFIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVSAGIMRISMGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQTLEEALDDLRQAIELSPPHISWYQLTIEPNTMFAYRPPKLPDDDALWDIFEQGHQLLTMAGYQQYETSAYAKAGFQCKHNLNYWRFGDYLAIGCGAHGKLTFPTGEITRFSKTKHPKGYLRGEYLYEEKNVPKIDRPFEFFMNRFRLLEAVPKQEFEDYTGLSQSAVKNQIDFAIQQNYIVENADSWQITEHGKLFLNELLELFLTEE

Annotated regions:
phrase: MPKLPPLSLYIHIPWCVQKCPYCDFNSHAQKSDIPEQDYIYHLLQDLQADLQRFKDSIQQRKLHSIFIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVSAGIMRISMGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQTLEEALDDLRQAIELSPPHISWYQLTIEPNTMFAYRPPKLPDDDALWDIFEQGHQLLTMAGYQQY
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: PLSLYIHIPWCVQKCPYCDFNSHAQKSDIPEQDYIYHLLQDLQADLQRFKDSIQQRKLHSIFIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVSAGIMRISMGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQTLEEALDDLRQAIELSPPHISWYQLTIEPNTMFAYRPPKLPDDDALWDIFE
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: PKIDRPFEFFMNRFRLLEAVPKQEFEDYTGLSQSAVKNQIDFAIQQNYIVENADSWQITEHGKL
type: DOMAIN
name: HemN_C
description: HemN, C-terminal

phrase: YIHIPWCVQKCPYCDFNSHAQKSDIPEQDYIYHLLQDLQADLQRFKDSIQQRKLHSIFIGGGTPSLFSAESIAYLLKEIKKQIDFEDNIEITLEANPGTVEAERFKGYVSAGIMRISMGIQSFNDDKLQRLGRIHNAAEAKSAVNLAKVSGLKSFNLDLMHGLPNQTLEEALDDL
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MNKRRIIEVLRHGQADDQVMVQGWLRTKRTLKDFSFVEVNDGSSLANLQVVLDGSLADYDRLLSQLQTGAALVVEGKLAPSPGKGQRVELKATKLELLGGADPGSYPLQKKRHSFEFLRTIGHLRPRTNTIGAVMRVRNACATAIHQFFQERGFLWVHTPIITASDCEGAGDLFKVTTLDLQRVPKNGEGIDYSQDFFGKQAYLTVSGQLEAEVMALAFQNVYTFGPTFRAENSNTSRHLAEFWMVEPEMAFCDLEGDRQWAEEFLKYIFKFVLEKCPEDMEFFDQRIDNTVLATADNIINNEFAWLTYSEAIKLLEKADQKFEYPVAWGVDLQSEHERYLAETVFKRPTIVTDYPKDIKAFYMRLNDDGKTVAAMDILAPKIGEIIGGSQREERLDILTQRMQEQGVPEEDLWWYLDLRRYGSVPHAGFGLGFERIVQFMTGMANIRDVIPFPRTPMNAEF

Annotated regions:
phrase: VMVQGWLRTKRTLKDFSFVEVNDGSSLANLQVVLDGSLADYDRLLSQLQTGAALVVEGKLAPSPGKGQRVELKATKLEL
type: DOMAIN
name: NA-bd_OB_tRNA
description: OB-fold nucleic acid binding domain, AA-tRNA synthetase-type

phrase: AIHQFFQERGFLWVHTPIITASDCEGAGDLFKVTTLDLQRVPKNGEGIDYSQDFFGKQAYLTVSGQLEAEVMALAFQNVYTFGPTFRAENSNTSRHLAEFWMVEPEMAFCDLEGDRQWAEEFLKYIFKFVLEKCPEDMEFFDQRIDNTVLATADNIINNEFAWLTYSEAIKLLEKADQKFEYPVAWGVDLQSEHERYLAETVFKRPTIVTDYPKDIKAFYMRLNDDGKTVAAMDILAPKIGEIIGGSQREERLDILTQRMQEQGVPEEDLWWYLDLRRYGSVPHAGFGLGFERIVQFMTGMANIRDVI
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: HLRPRTNTIGAVMRVRNACATAIHQFFQERGFLWVHTPIITASDCEGAGDLFKVTTLDLQRVPKNGEGIDYSQDFFGKQAYLTVSGQLEAEVMALAFQNVYTFGPTFRAENSNTSRHLAEFWMVEPEMAFCDLEGDRQWAEEFLKYIFKFVLEKCPEDMEFFDQRIDNTVLATADNIINNEFAWLTYSEAIKLLEKADQKFEYPVAWGVDLQSEHERYLAETVFKRPTIVTDYPKDIKAFYMRLNDDGKTVAAMDILAPKIGEIIGGSQREERLDILTQRMQEQGVPEEDLWWYLDLRRYGSVPHAGFGLGFERIVQFMTGMANIRDVIPFPR
type: DOMAIN
name: Aa-tRNA-synt_II
description: Aminoacyl-tRNA synthetase, class II (D/K/N)
Protein sequence:
MTGKVNRDLFFKLASDLREERLHAAVALIKDLSALDLPDDAEEWSYVLNRLIKGLSSDRNSARLGFSLCLTEVINLAVNMPPGQRPKGLESTNEFLSTLSTILNVNVNEGTKKSMKGKDERGILFGKLFGLKSLLNEPLFSEIFVKDLEKGNTEFFIRFTEQLIDLALKKNWIKEPCFFTLFQTMKMLLPFMDESSAEKILLIYDKYDLTLTNEGLSTYLLLKYEGDESLIPSVLDLKNPGWKDNDPLARGNLPLLTKVLRNSSVIPDANGGLKETKKQKNTNWNPRLHFVWSVLLPLFGNGKLENTSHISKKRKKTNNKKVQNSIQFPEFWKMAVDESFFNEKASSERKYLGFLIIDAAFKAVPGSYIGFCFSQNVMRTLINQSIDSQRVLNKISQLTLDSIVKACEEDSANRLVPCLNAMLFGPHGSINFDKLTKSGTVSKLIAIKELPSTVLAQLLDVFFLQLQDKKGVLSHTLFALDSILHIVRAHKVEINDMDIMKPVLRPIVYMAFFKHTSDDLKLEQLHELAKERLYSILGELTINKEIRCKDPEINSWQYLTLKLILDIENSHVGDLINPLDENLENIKNEAISCLSKVCRSRTAQSWGLSTLLSMCLVQLYAGDTDSISVIEELCEFSKHENNSMVGITEILLSLLAQKKALLRKLSLIIWQQFIEEVGLEELQILLDILKARENKQGFAQLFEGEEEFEEIKEENDASEDESKTGSESESESESDSDDADEKDEEDEANEDILNIDKEATSALVKALNLPDNIVNDKGEVDLDQLEGLSDDGGDDEDEESMDDEKMMELDDQLSEIFKRRKEALSSISTGNQRKFEVKQSRENVISFKHRVVDMLAVYVKYCEKLTLANKSEHSNNLGGSLSKLVYFIIPMLKCVNETLDRPLADKISKLLKGKIFKIKVTAFKDMNKDIELMDLLKKTHKLMLTSKPGQHAAVFYSMCSTSSLFLSKLYVEIGGNDKLDELIDLYTATTKEWMQKGKCGPNIFIDFINWLSSKKQTVMDKE

Annotated regions:
phrase: AGDTDSIS
type: CONSERVED_SITE
name: DNA-dir_DNA_pol_B_CS
description: DNA-directed DNA polymerase, family B, conserved site
Protein sequence:
MAVISMKQLLEAGVHFGHQTRRWNPKMAKYIFTERNGIHVIDLQQTVKLADQAYEFVRDAAANDAVILFVGTKKQAAEAVADEATRAGQYFINHRWLGGTLTNWGTIQKRIARLKEIKRMEEEGTFDVLPKKEVALLNKQRARLEKFLGGIEDMPRIPDVMYVVDPHKEQIAVKEAKKLGIPVVAMVDTNADPDDIDIIIPANDDAIRAVKLITAKLADAIIEGRQGEDADVAFEADTQADSIEEIVEVVEGDNA

Annotated regions:
phrase: MKQLLEAGVHF
type: CONSERVED_SITE
name: Ribosomal_uS2_CS
description: Small ribosomal subunit protein uS2, conserved site
Protein sequence:
MKQPLLALQLLKLLLLLLLPLPPLPRALREARCCPEPCNCTPDGALRCPGPGAGLTRLSLAYLPVKVIPSQAFRGLNEVIKIEISQSDSLERIEANAFDNLLNLSEILIQNTKNLIHIEPGAFTNLPRLKYLSICNTGIRKFPDVTKIFSSETNFILEICDNLHITTIPGNAFQGMNNESITLKLYGNGFEEVQSHAFNGTTVISLVLKENVHLERIHNGAFRGATGPSILDISSTKLQALPSHGLESIQTLIATSSYSLKKLPSREKFANLLDATLTYPSHCCAFRNVPTKDYPAIFAESGQSGWDYDYGFHLPKTPRCAPEPDAFNPCEDIMGYDFLRVLIWLINILAIMGNMTVLFVLLTSRYKLTVPRFLMCNLSFADFCMGLYLLLIASVDSQTKGQYYNHAIDWQTGSGCNTAGFFTVFASELSVYTLTVITLERWHTITYAIHLDQKLRLRHAILIMLGGWLFSSLIAMLPLVGVSNYMKVSICFPMDVETTLSQIYILTILILNVVAFIIICACYIKIYFAVRNPELMATNKDTKIAKKMAILIFTDFTCMAPISFFAISAAFKMPLITVTNSKVLLVLFYPINSCANPFLYAIFTKTFRRDFFLLLGKFGCCKHRAELYRRKDFSAYTSNYKNGFTGSSKPSQSTLKLPALHCQGTALLDKTCYKEY

Annotated regions:
phrase: HITTIPGNAFQGMNNESITLKLYGNGFEEVQSHAFNGTTVISLVLKENVHLERIHNGAFRGATGPSILDIS
type: REPEAT
name: LRR_5
description: BspA-type LRR region

phrase: VKVIPSQAFRGLNEVIKIEISQSDSLERIEANAFDNLLNLSEILIQNTKNLIHIEPGAFTNLPRLKYLSICN
type: REPEAT
name: LRR_5
description: BspA-type LRR region

phrase: GNMTVLFVLLTSRYKLTVPRFLMCNLSFADFCMGLYLLLIASVDSQTKGQYYNHAIDWQTGSGCNTAGFFTVFASELSVYTLTVITLERWHTITYAIHLDQKLRLRHAILIMLGGWLFSSLIAMLPLVGVSNYMKVSICFPMDVETTLSQIYILTILILNVVAFIIICACYIKIYFAVRNPELMATNKDTKIAKKMAILIFTDFTCMAPISFFAISAAFKMPLITVTNSKVLLVLFYPINSCANPFL
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM
Protein sequence:
MSVVSLLGVNVMNNPAKFTDKYLFEITFECLEHLEKDLEWKLTYVGSATSDNYDQELDSLLVGPIPVGVNKFIFEAEPPDTKRIPIDELLGVTVILLTCAYDGREFVRVGYYVNNEYESEELINDPPPKPVIEKIRRNVLAEKPRVTRFAIKWDSEASAPPEFPPEQPEADEVADEEEYGADELAEQSSIADPAVNGGMEVEGQPNGAIVIEEDEMSEDGSVDLENESEDELDGEGDAEGELEQGQDEDIEMGDEMEIDDHPKQQGMAMAQ

Annotated regions:
Protein sequence:
MLRGKGGSRITCVCWPDRVIGPSAGAGSSAVLGSETVLWRWIYHYGVTDFDKATDVAKELRAVLKEKFVLERPPISAAQVSVDGTRKWLIGYGPNVEAECVYIPDVGKAGALCVSSQVGCTLTCSFCHTGTQKLVRNLSAAEIVNQIMVARDALNEWPTAEKPLNLGDRLLTNIVFMGMGEPLYNLDNVVEALETIGDGDGISISKRRITVSTAGVAPKIPELGKRTGAMLAISLHATNDDLRDQLVPINKKYDLKELFDAIRQYPDLSNSRRVTFEYVMLKGVNDTLAEARDLVRLMKHVPAKINLIPFNPWPGTQYECSDWETIEAFAEVLNRAGYASPIRTPRGRDILAACGQLRSESVKEKASEALKRRLAEKEAAAEG

Annotated regions:
phrase: SSQVGCTLTCSFCHTGTQKLVRNLSAAEIVNQIMVARDALNEWPTAEKPLNLGDRLLTNIVFMGMGEPLYNLDNVVEALETIGDGDGISISKRRITVSTAGVAPKIPELGKRTGAMLAISLHATNDDLRDQLVPINKKYDLKELFDAIRQYPDLSNSRRVTFEYVMLKGVNDTLA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LWRWIYHYGVTDFDKATDVAKELRAVLKEKFVLERPPISAAQVSVDGTRKWLIGYGPNVEAECVYIPDVGKAGALCVSSQVGCTLTCSFCHTGTQKLVRNLSAAEIVNQIMVARDALNEWPTAEKPLNLGDRLLTNIVFMGMGEPLYNLDNVVEALETIGDGDGISISKRRITVSTAGVAPKIPELGKRTGAMLAISLHATNDDLRDQLVPINKKYDLKELFDAIRQYPDLSNSRRVTFEYVMLKGVNDTLAEARDLVRLMKHVPAKINLIPFNPWPGTQYECSDWETIEAFAEVLNRAGYASPIRTPRGRDILAACGQLRSESVKEKAS
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VGKAGALCVSSQVGCTLTCSFCHTGTQKLVRNLSAAEIVNQIMVARDALNEWPTAEKPLNLGDRLLTNIVFMGMGEPLYNLDNVVEALETIGDGDGISISKRRITVSTAGVAPKIPELGKRTGAMLAISLHATNDDLRDQLVPINKKYDLKELFDAIRQYPDLSNSRRVTFEYVMLKGVNDTLAEARDLVRLMKHVPAKINLIPFNPWPGTQYECSDWETIEAFAEVLNRAGYASPI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LWRWIYHYGVTDFDKATDVAKELRAVLKEK
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MSGLTHFDESGSAHMVDVSEKPVTARVAVARGAVKMSAETLALVTEGRAEKGDVLGVARLAGIMGAKRTADLIPLCHPLPITKVALELTADPALPGVVVEATVKTGGQTGVEMEALTAVSVACLTIYDMVKAVEKGMEITGIRLLLKEGGKSGRFEASA

Annotated regions:
phrase: MVDVSEKPVTARVAVARGAVKMSAETLALVTEGRAEKGDVLGVARLAGIMGAKRTADLIPLCHPLPITKVALELTADPALPGVVVEATVKTGGQTGVEMEALTAVSVACLTIYDMVKAVEKGMEITGIRLLLKEG
type: DOMAIN
name: Mopterin_CF_biosynth-C_dom
description: Molybdopterin cofactor biosynthesis C (MoaC) domain
Protein sequence:
MDKIVLESCRFYGYHGAFKEEQTLGQIFLVDLELSVDLQAASLSDQLTDTVHYGMVFDSVRQLVEGGKFILIERLAGAICEQLFNEFPPIEAIKVAIKKENPPIAGHYKAVGIELERQR

Annotated regions:
phrase: MDKIVLESCRFYGYHGAFKEEQTLGQIFLVDLELSVDLQAASLSDQLTDTVHYGMVFDSVRQLVEGGKFILIERLAGAICEQLFNEFPPIEAIKVAIKKENPPIAGHYKAVGIELER
type: DOMAIN
name: FolB_dom
description: Dihydroneopterin aldolase/epimerase domain

phrase: IVLESCRFYGYHGAFKEEQTLGQIFLVDLELSVDLQAASLSDQLTDTVHYGMVFDSVRQLVEGGKFILIERLAGAICEQLFNEFPPIEAIKVAIKKENPPIAGHYKAVGIEL
type: DOMAIN
name: FolB_dom
description: Dihydroneopterin aldolase/epimerase domain

phrase: IVLESCRFYGYHGAFKEEQTLGQIFLVDLELSVDLQAASLSDQLTDTVHYGMVFDSVRQLVEGGKFILIERLAGAICEQLFNEFPPIEAIKVAIKKENPPIAGHYKAVGIELE
type: DOMAIN
name: FolB_dom
description: Dihydroneopterin aldolase/epimerase domain

phrase: MDKIVLESCRFYGYHGAFKEEQTLGQIFLVDLELSVDLQAASLSDQLTDTVHYGMVFDSVRQLVEGGKFILIERLAGAICEQLFNEFPPIEAIKVAIKKENPPIAGHYKAVGIELERQ
type: DOMAIN
name: FolB_dom
description: Dihydroneopterin aldolase/epimerase domain
Protein sequence:
MNLHEYQAKDLLESYGLKVQKGIVAHNPNEAAQAFDQLGGKFAVVKAQVHAGGRGKAGGVKVVKSSQEAREVAESLIGTNLVTFQTDAEGQPVNSVGVFEDVYPVTRELYLGAVVDRSSRKVTFMASTEGGVDIEEVAHNTPEKILKVEVDPLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFVECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPKLLALRDKSQENAKELKASEHELNYVALEGNIGCMVNGAGLAMATMDIIQLYGGKPANFLDVGGGATKERVIEAFKLILDDENVKAVLINIFGGIVRCDMIAEAIIEAVKEVNVTVPVVVRLEGNNAEKGAKILADSGLTLIPADGLADAADKVVKSLG

Annotated regions:
phrase: NLHEYQAKDLLESYGLKVQKGIVAHNPNEAAQAFDQLGGKFAVVKAQVHAGGRGKAGGVKVVKSSQEAREVAESLIGTNLVTFQTDAEGQPVNSVGVFEDVYPVTRELYLGAVVDRSSRKVTFMASTEGGVDIEEVAHNTPEKILKVEVDPLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFVECDFALFEINPL
type: DOMAIN
name: ATP-grasp_succ-CoA_synth-type
description: ATP-grasp fold, succinyl-CoA synthetase-type

phrase: GNIGCMVNGAGLAMATMDIIQLYGG
type: CONSERVED_SITE
name: Succ-CoA_synthase_bsu_CS
description: Succinyl-CoA synthetase, beta subunit, conserved site

phrase: MVNGAGLAMATMDIIQLYGGKPANFLDVGGGATKERVIEAFKLILDDENVKAVLINIFGGIVRCDMIAEAIIEAVKEVNVTVPVVVRLEGNNAEKGAKILADSGLTLIPADGLADAADKV
type: DOMAIN
name: SUCC_ACL_C
description: ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain

phrase: KDLLESYGLKVQKGIVAHNPNEAAQAFDQLGGKFAVVKAQVHAGGRGKAGGVKVVKSSQEAREVAESLIGTNLVTFQTDAEGQPVNSVGVFEDVYPVTRELYLGAVVDRSSRKVTFMASTEGGVDIEEVAHNTPEKILKVEVDPLVGLQPFQAREVAFKLGLEGKQINDFVKTMLGAYKAFVECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPKLL
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold
Protein sequence:
MVELNNCSNSEETGGVDSLEVRFTDFCKNGLSMGESFVTEATKLFNDSKHLLLSNNSTIGVITQEGVERYWFVFVLYSVKRLSEKEAGNSNNGDKGNAFSLCQILRGAKLNVVDFFKELPQFILKVGPTLSNLYGSDWEKRLEVKELQTNFVHLSLLSKYYKRAYQELFLASGNNEDKPSATSNSAIHLPQYYRFGWLLFLSLRIHVFSRFKDLVTCTNGLVSVLAILMIHVPVRFRNFNIDDSSRFVKKGDKVDLLASLSKIYQTSIDDLRETMDKVNNLITEKLKKKPCLASEFRTENLDNLDTDGLTYFEDLMEESCLSSSVSTLEKDYSDAIQNKGELDERIFVNEEDSLLGSGSLSGGAVNMNGTKRKFDAMASPAKTVTSTLSPYRSPNCANSKMTAATPVSTAMTTARWLRTVIAPLQPKPSAELERFLSSCDRDVTADVIRRAQIILEAIFPSSGPAEHCAAGGSLQSTSLMDNIWAEQRRSEALKLYYRVLQTMCTAESQILNGNNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNSLAVAKPSLAAEINRMGLLAEPMPSLDAIAMHINLSSGSLPPLPSLHKNNLAPNGQIGDIRSPKKVCSEYRSVLVERNSFTSPVKDRFLALNNIKSKFPPPALHSAFASPTRPNPGGGGETCAETAINVFFGKIVKLAAVRINGMIERLQLSQQIRETVYCLFQKILSQRTSLFFNRHIDQIILCSFYGVAKISQLNLTFKEIICNYRKQPQCKPQVFRSVFVDWTLARHNVRTGADHVDIITFYNEMFIPSVKPLLVELAPAGNNSEKNDHNDGQGPASPKPSPFPKLPDMSPKKVSAVHNVYVSPLRASKMDALISHSSKSYYACVGESTHAYQSPSKDLDVINNRLNGNRKLRGALNFDVDAGLVSDSIVANSLYLQNGNCRSPVAHVKTEQPES

Annotated regions:
phrase: TPVSTAMTTARWLRTVIAPLQPKPSAELERFLSSCDRDVTADVIRRAQIILEAIFPSSGPAEHCAAGGSLQSTSLMDNIWAEQRRSEALKLYYRVLQTMCTAESQILNGNNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNS
type: DOMAIN
name: RB_A
description: Retinoblastoma-associated protein, A-box

phrase: LSEKEAGNSNNGDKGNAFSLCQILRGAKLNVVDFFKELPQFILKVGPTLSNLYGSDWEKRLEVKELQTNFVHLSLLSKYYKRAYQELFLASGNNEDKPSATSNSAIHLPQYYRFGWLLFLSLRIHVFSRFKDLVTCTNGLVSVLAILMI
type: DOMAIN
name: RB_N
description: Retinoblastoma-associated protein, N-terminal

phrase: VRINGMIERLQLSQQIRETVYCLFQKILSQRTSLFFNRHIDQIILCSFYGVAKISQLNLTFKEIICNYRKQPQCKPQVFRSVFVDWTLARHNVRTGADHVDIITFYNEMFIPSVKPLL
type: DOMAIN
name: Cyclin-like_dom
description: Cyclin-like domain

phrase: GDKGNAFSLCQILRGAKLNVVDFFKELPQFILKVGPTLSNLYGSDWEKRLEVKELQTNFVHLSLLSKYYKRAYQELFLASGNNEDKPSATSNSAIHLPQYYRFGWLLFLSLRIHVFSRFKDLVTCTNGLVSVLAILMI
type: DOMAIN
name: RB_N
description: Retinoblastoma-associated protein, N-terminal

phrase: INVFFGKIVKLAAVRINGMIERLQLSQQIRETVYCLFQKILSQRTSLFFNRHIDQIILCSFYGVAKISQLNLTFKEIICNYRKQPQCKPQVFRSVFVDWTLARHNVRTGADHVDIITFYNEMFIPSV
type: DOMAIN
name: RB_B
description: Retinoblastoma-associated protein, B-box

phrase: TPVSTAMTTARWLRTVIAPLQPKPSAELERFLSSCDRDVTADVIRRAQIILEAIFPSSGPAEHCAAGGSLQSTSLMDNIWAEQRRSEALKLYYRVLQTMCTAESQILNGNNLTSLLTNERFHRCMLACSAELVLATHKTVTMLFPAVLERTGITAFDLSKVIESFIRHEESLPRELRRHLNSLEERLLESMVWEKGSSMYNS
type: DOMAIN
name: RB_A
description: Retinoblastoma-associated protein, A-box
Protein sequence:
MSGRGPSVAETVRRRNAEAAGALIGYLPVGFPDLPTSIDAAVAMAENGVDAIELGLPYSDPVMDGPVIQEATQAAIANGFRLRHGFEAVREIRARVDVPVLVMTYYNPVLQYGVERFATDLAEAGGSGLITPDLIPDEGAEWLAVSERLGLDRVFLAAPSSTDARLRQAVDSSRGFVYAVSTMGITGARTDVDSAARTLVDRLRAAGSESACVGLGISTGEQVAEILAYADGAIVGSALVRALASGASPPSPTPPAASPRARACAPGADPSRYNRDAHRGSGPAVPGGPPPSKGRVPVSVPLSIPSPPEAWSQYDLTIGNWTLAIHTYALCILAGIIVATIMTNQRLKRRGAEPWVVLDIIIWAVPLGIVGARVYHVLTHPGDYFFDGADPWEVIRIWNGGNAIFGGLIGGAVGAFIGCRWTGVRFWTFADALAPGLLAAQALGRIGNWFNHELFGLPTTLPWGLEIETTNPAFPVGLPAGTLFHPTFLYEVVWNVVGIAVILLLERRLRLQWGTVFAAYLIWYGVGRVWFESIRIDPSEFFWGIRTNVWAALLAVVIGLVLVVIQKREHPGAEPSAYRPGREWTPAPAGIEFEDVESDSDGTTTPASGTDAEKPTVSRT

Annotated regions:
phrase: IELGLPYSDPVMD
type: ACTIVE_SITE
name: Trp_synthase_alpha_AS
description: Tryptophan synthase, alpha chain, active site
Protein sequence:
MAVKKYSAGVKEYRQTYWMPEYTPLDSDILACFKITPQPGVDREEAAAAVAAESSTGTWTTVWTDLLTDMDYYKGRAYRIEDVPGDDAAFYAFIAYPIDLFEEGSVVNVFTSLVGNVFGFKAVRGLRLEDVRFPLAYVKTCGGPPHGIQVERDKMNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENINSQPFMRWRDRFLFVQDATETAEAQTGERKGHYLNVTAPTPEEMYKRAEFAKEIGAPIIMHDYITGGFTANTGLAKWCQDNGVLLHIHRAMHAVIDRNPNHGIHFRVLTKILRLSGGDHLHTGTVVGKLEGDRASTLGWIDLLRESFIPEDRSRGIFFDQDWGSMPGVFAVASGGIHVWHMPALVNIFGDDSVLQFGGGTLGHPWGNAAGAAANRVALEACVEARNQGRDIEKEGKEILTAAAQHSPELKIAMETWKEIKFEFDTVDKLDTQNR

Annotated regions:
phrase: GLDFTKDD
type: ACTIVE_SITE
name: RuBisCo_large_chain_AS
description: Ribulose bisphosphate carboxylase, large chain, active site

phrase: YWMPEYTPLDSDILACFKITPQPGVDREEAAAAVAAESSTGTWTTVWTDLLTDMDYYKGRAYRIEDVPGDDAAFYAFIAYPIDLFEEGSVVNVFTSLVGNVFGFKAVRGLRLEDVRFPLA
type: DOMAIN
name: RuBisCO_lsu_fd_N
description: Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal

phrase: GIQVERDKMNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENINSQPFMRWRDRFLFVQDATETAEAQTGERKGHYLNVTAPTPEEMYKRAEFAKEIGAPIIMHDYITGGFTANTGLAKWCQDNGVLLHIHRAMHAVIDRNPNHGIHFRVLTKILRLSGGDHLHTGTVVGKLEGDRASTLGWIDLLRESFIPEDRSRGIFFDQDWGSMPGVFAVASGGIHVWHMPALVNIFGDDSVLQFGGGTLGHPWGNAAGAAANRVALEACVEARNQGRDIEKEGKEILTAAAQHSPELKIAMET
type: DOMAIN
name: RuBisCO_lsu_C
description: Ribulose bisphosphate carboxylase, large subunit, C-terminal
Protein sequence:
MTVPSDLDISRATALRPLEDIAAQLGLGPHLLEPYGHNVAKISLDAIEELSDRPQARYVVVSAITPTPLGEGKTTTTVGLGQALRHLGKVSAVAVRQPSMGPTFGIKGGAAGGGYSQVVPMEALNLHLTGDMHAVTAAHNLLSAMLDNHLHKGNRLGVDPHRITWRRVLDVNDRDLRNIVTGMGGRADGTPRQTGFDITAASEVMAVLALSTSLRDMRRRLGRIVVGYTRDGSPVTAEDLRAAGAMTAIMREAIKPNLMQTTENTPVLVHAGPFGNIAHGNSSVVADRIAGRCADYLVTEAGFGADMGAERFFNIKCRTSGMRPDAAVLVATVRALKAHSGRYKVVAGRPLPPEMLAENPDDVLAGAENLRKQIDNIRLHGVSPVVAVNAFPTDHGSEHDAIRRVAEEEGARVAVSNHYSEGGKGALELAEVVVEAAEEPNRFRLLYPDSADLRTKIETIATRVYGADGVSYQPAAARALADYEAIGFGSLPVCIAKTHLSLSSDPSLLGAPTGWTLPVREVRASIGAGFIYAICGEMRTMPGLGSHPAAERIDIDEHGQIVGLS

Annotated regions:
phrase: VATVRALKAHS
type: CONSERVED_SITE
name: Formate_THF_ligase_CS
description: Formate-tetrahydrofolate ligase, FTHFS, conserved site

phrase: GIKGGAAGGG
type: CONSERVED_SITE
name: Formate_THF_ligase_CS
description: Formate-tetrahydrofolate ligase, FTHFS, conserved site
Protein sequence:
MLVWLAEHLVKYYSGFNVFSYLTFRAIVSLLTALFISLWMGPRMIARLQKLSFGQVVRNDGPESHFSKRGTPTMGGIMILTAITVSVLLWAYPSNPYVWCVLTVLIGYGIIGFVDDYRKVVRKDTKGLIARWKYFWMSVIALGVAFALYLAGKDTPATELVVPFFKDVMPQLGLLYILLAYFVIVGTGNAVNLTDGLDGLAIMPTVFVAAGFALVAWATGNMNFANYLHIPYLRHAGELVIVCTAIVGAGLGFLWFNTYPAQVFMGDVGSLALGGALGIIAVLLRQEFLLVIMGGVFVVETLSVILQVGSFKLRGQRIFRMAPIHHHYELKGWPEPRVIVRFWIISLMLVLIGLATLKVR

Annotated regions:
phrase: NAVNLTDGLDG
type: CONSERVED_SITE
name: PNAcMuramoyl-5peptid_Trfase_CS
description: Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site

phrase: KRGTPTMGGIMI
type: CONSERVED_SITE
name: PNAcMuramoyl-5peptid_Trfase_CS
description: Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site

phrase: KRGTPTMGGIMI
type: CONSERVED_SITE
name: PNAcMuramoyl-5peptid_Trfase_CS
description: Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site
Protein sequence:
MDWLLAGLGNPGAEYARTRHNAGFWTLQTLADRVGASLRMEKRWHCLAATARASGLELGLCMPQDFMNRSGGPVQAMAAFYKVAAERILVMHDELDLPPGAARLKRGGGHGGHNGLRDLDRALGTRDYWRLRIGIGHPGHKDAVIPYVLSAPPPADKTLIDEAIERSLGVLPDFLCGRTDAAQKSLHSD

Annotated regions:
phrase: GHGGHNGLRD
type: CONSERVED_SITE
name: Pept_tRNA_hydro_CS
description: Peptidyl-tRNA hydrolase, conserved site
Protein sequence:
MNQINIQFPDGNTKEFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTRPLEQDGAIEIITPGSEEALEVLRHSTAHLMAQALKRLYGDVKFGVGPVIEGGFYYDFDMDDKVSSDDFDKIEKTMKQIVNENHKIVREVVSKEKAKDFFKDDPYKLELIDAIPEDESVTLYTQGEFTDLCRGVHVPSTSKIKEFKLLSTAGAYWRGNSDNKMLQRIYGTAFFDKKDLKAHLKMLEERRERDHRKIGKDLELFTNNQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPAMKLDEDEAMVLRPMNCPHHMMIYKNKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIQDVYKDFGFEDYRFRLSYRDPEDKHKYFDDDEMWEKAESMLKEASDELGLTYEEAIGEAAFYGPKLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDGEQHRPVVIHRGVVSTMERFVAFLTEETKGAFPTWLAPMQVEIIPVNIDLHYDYARLLQDELKSQGVRVEIDDRNEKMGYKIREAQMKKIPYQIVVGDQEVENQEVNVRKYGSEKQESVEKDEFIWNVIDEIRLKKHR

Annotated regions:
phrase: DEDEAMVLRPMNCPHHMMIYKNKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIQDVYKDFGFEDYRFRLSYRDPEDKHKYFDDDEMWEKAESMLKEASDELGLTYEEAIGEAAFYGPKLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDGEQHRPVVIHRGVVSTMERFVAFLTE
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: DHRKIGKDLELFTNNQLVGAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPAMKLDEDEAMVLRPMNCPHHMMIYKNKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIQDVYKDFGFEDYRFRLSYRDPEDKHKYFDDDEMWEKAESMLKEASDELGLTYEEAIGEAAFYGPKLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDGEQHRPVVIHRGVVSTMERFVAFLTEETKGAFPTWLA
type: DOMAIN
name: ThrRS_core
description: Threonine-tRNA ligase catalytic core domain

phrase: VTLYTQGEFTDLCRGVHVPSTSKIKEFKLLSTAGAYWRGNSDNKMLQRI
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD

phrase: INIQFPDGNTKEFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTRPLEQDGAIEII
type: DOMAIN
name: TGS
description: TGS

phrase: PNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPAMKLDEDEAMVLRPMNCPHHMMIYKNKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIQDVYKDFGFEDYRFRLSYRDPEDKHKYFDDDEMWEKAESMLKEASDELGLTYEEAIGEAAFYGPKLDVQVKTAMGKEETLSTAQLDFLLPERFDLTYIGQDGEQHRPVVIHRGVVSTMERFVAFLTEETKGAF
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: VTLYTQGEFTDLCRGVHVPSTSKIKEFKLLSTAGAYWRGNSDNKMLQRI
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD

phrase: PMQVEIIPVNIDLHYDYARLLQDELKSQGVRVEIDDRNEKMGYKIREAQMKKIPYQIVVGDQEVENQEVNVRKYGSEKQESVEKDEF
type: DOMAIN
name: ThrRS_anticodon
description: Threonine-tRNA ligase, class IIa, anticodon-binding domain

phrase: QVEIIPVNIDLHYDYARLLQDELKSQGVRVEIDDRNEKMGYKIREAQMKKIPYQIVVGDQEVENQEVNVRKYGSEKQESVEKDEF
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: MNQINIQFPDGNTKEFDKGTTTEDIAQSISPGLRKKAVAGKFNGQLVDLTRPLEQDGAIEII
type: DOMAIN
name: TGS
description: TGS