nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MAKEAFLRKKPHINVGTIGHVDHGKTTLTSAITYVLAKKGLAQKMAYDQIDKAPEEKERGITINTAHVEYESDKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFLNKVDMVDDKELLELVELEVRELLNQYGFPGDKIPIIKGSALKALEGDPEYEKNILELVEAMDNYIPIPERPKDQPFLMPIEDVFNIEGRGTVVTGRVERGTLKRMEEVEIVGIRPTTKTVVTDIEMFRKTLDTAEAGDNVGLLLRGIKKDDVERGQVVAKPGTITPHHKFNAQVYVLKKEEGGRHTAFFNGYRPQFFFRTTDVTGTVTLKEGVEMVMPGDNVEFMVELISPIAMEKSMRFAIREGGKTVGAGVVTEIIE

Annotated regions:
phrase: KPHINVGTIGHVDHGKTTLTSAITYVLAKKGLAQKMAYDQIDKAPEEKERGITINTAHVEYESDKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFLNKVDMVDDKELLELVELEVRELLNQYGFPGDKIPIIKGSALKALEGDPEYEKNILELVEAMDNYIPIP
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: PHINVGTIGHVDHGKTTLTSAITYVLAKKGLAQKMAYDQIDKAPEEKERGITINTAHVEYESDKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFLNKVDMVDDKELLELVELEVRELLNQYGFPGDKIPIIKGSALKALEGDPEYEKNILELVEAMDNYIPI
type: DOMAIN
name: EF-Tu_GTP-bd
description: Elongation factor Tu (EF-Tu), GTP-binding domain

phrase: DKAPEEKERGITINT
type: CONSERVED_SITE
name: G_TR_CS
description: Tr-type G domain, conserved site

phrase: NVGTIGHVDHGKT
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: ERGITINT
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: AHVDCPGHAD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: TGAAQMDGAIL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: IVVFLNKVD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: INVGTIGHVDHGKTTLTSAITYVLAKKGLAQKMAYDQIDKAPEEKERGITINTAHVEYESDKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFLNKVDMVDDKELLELV
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: FLMPIEDVFNIEGRGTVVTGRVERGTLKRMEEVEIVGIRPTTKTVVTDIEMFRKTLDTAEAGDNVGLLLRGIKKDDVERGQVVAKP
type: DOMAIN
name: EFTU_2
description: Elongation factor Tu, domain 2

phrase: KPHINVGTIGHVDHGKTTLTSAITYVLAKKGLAQKMAYDQIDKAPEEKERGITINTAHVEYESDKRHYAHVDCPGHADYIKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFLNKVDMVDDKELLELVELEVRELLNQYGFPGDKIPIIKGSALKALEGDPEYEKNILELVEAMDNYI
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: GTVVTGRVERGTLKRMEEVEIVGIRPTTKTVVTDIEMFRKTLDTAEAGDNVGLLLRGIKKDDVERGQV
type: DOMAIN
name: EFTu-like_2
description: Translation elongation factor EFTu-like, domain 2

phrase: TITPHHKFNAQVYVLKKEEGGRHTAFFNGYRPQFFFRTTDVTGTVTLKEGVEMVMPGDNVEFMVELISPIAMEKSMRFAIREGGKTVGAGVVTE
type: DOMAIN
name: Transl_elong_EFTu/EF1A_C
description: Translation elongation factor EFTu/EF1A, C-terminal
Protein sequence:
MGKITLYEDRGFQGRHYECSSDHPNLQPYLSRCNSARVDSGCWMLYEQPNYSGLQYFLRRGDYADHQQWMGLSDSVRSCRLIPHSGSHRIRLYEREDYRGQMIEFTEDCSCLQDRFRFNEIHSLNVLEGSWVLYELSNYRGRQYLLMPGDYRRYQDWGATNARVGSLRRVIDFS

Annotated regions:
phrase: VDSGCWMLYEQPNYSGLQY
type: DOMAIN
name: Beta/gamma_crystallin
description: Beta/gamma crystallin

phrase: LRRGDYADHQQWMG
type: DOMAIN
name: Beta/gamma_crystallin
description: Beta/gamma crystallin

phrase: IRLYEREDYRGQMIEFTED
type: DOMAIN
name: Beta/gamma_crystallin
description: Beta/gamma crystallin

phrase: PGDYRRYQD
type: DOMAIN
name: Beta/gamma_crystallin
description: Beta/gamma crystallin

phrase: HRIRLYEREDYRGQMIEFTEDCSCLQDRFRFNEIHSLNVL
type: DOMAIN
name: Beta/gamma_crystallin
description: Beta/gamma crystallin

phrase: KITLYEDRGFQGRHYECSSDHPNLQPYLSRCNSARVDSGCWMLYEQPNYSGLQYFLRRGDYADHQQWMGLSDSVRSCRL
type: DOMAIN
name: Beta/gamma_crystallin
description: Beta/gamma crystallin

phrase: RIRLYEREDYRGQMIEFTEDCSCLQDRFRFNEIHSLNVLEGSWVLYELSNYRGRQYLLMPGDYRRYQDWGATNARVGSLRR
type: DOMAIN
name: Beta/gamma_crystallin
description: Beta/gamma crystallin

phrase: GCWMLYEQPNYSGLQYFLRRGDYADHQQWMGLSDSVRSCRLI
type: DOMAIN
name: Beta/gamma_crystallin
description: Beta/gamma crystallin

phrase: GSWVLYELSNYRGRQYLLMPGDYRRYQDWGATNARVGSLRRV
type: DOMAIN
name: Beta/gamma_crystallin
description: Beta/gamma crystallin

phrase: RIRLYEREDYRGQMIEFTEDCSCLQDRFRFNEIHSLNVLEGSWVLYELSNYRGRQYLLMPGDYRRYQDWGATNARVGSLRR
type: DOMAIN
name: Beta/gamma_crystallin
description: Beta/gamma crystallin

phrase: KITLYEDRGFQGRHYECSSDHPNLQPYLSRCNSARVDSGCWMLYEQPNYSGLQYFLRRGDYADHQQWMGLSDSVRSCRL
type: DOMAIN
name: Beta/gamma_crystallin
description: Beta/gamma crystallin

phrase: GKITLYEDRGFQGRHYECSSDHPNLQPYLSRCNSARVD
type: DOMAIN
name: Beta/gamma_crystallin
description: Beta/gamma crystallin
Protein sequence:
MGDESETAVKPPAPPLPQMMEGNGNGHEHCSDCENEEDNSYNRGGLSPANDTGAKKKKKKQKKKKEKGSETDSAQDQPVKMNSLPAERIQEIQKAIELFSVGQGPAKTMEEASKRSYQFWDTQPVPKLGEVVNTHGPVEPDKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGTCRYWHRSLNPRKLIEVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMEKKDIPVVHQLLSRYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNNLQYYLYNWKCPSMGAEKVGLVLQ

Annotated regions:
phrase: EVKFSHLSRNMTMQRTMKLYRLPETPKTAGLRPMEKKDIPVVHQLLSRYLKQFHLTPVMSQEEVEHWFYPQENIIDTFVVENANGEVTDFLSFYTLPSTIMNHPTHKSLKAAYSFYNVHTQTPLLDLMSDALVLAKMKGFDVFNALDLMENKTFLEKLKFGIGDGNNLQYYLYNWKCPSMGAEKVGL
type: DOMAIN
name: NMT_C
description: Glycylpeptide N-tetradecanoyltransferase, C-terminal

phrase: DKDNIRQEPYTLPQGFTWDALDLGDRGVLKELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPGWLPQWHCGVRVVSSRKLVGFISAIPANIHIYDTEKKMVEINFLCVHKKLRSKRVAPVLIREITRRVHLEGIFQAVYTAGVVLPKPVGT
type: DOMAIN
name: NMT_N
description: Glycylpeptide N-tetradecanoyltransferase, N-terminal

phrase: KFGIGD
type: CONSERVED_SITE
name: NMT_CS
description: Glycylpeptide N-tetradecanoyltransferase, conserved site

phrase: EINFLCVH
type: CONSERVED_SITE
name: NMT_CS
description: Glycylpeptide N-tetradecanoyltransferase, conserved site
Protein sequence:
MAAEGDSPARPRVYFDISIGGKSVGRITMELYADLVPKTADNFRSLCTGEKGIGKSGKPLHYKGSVFHRVIKQFMIQGGDFTAGDGTGGESIYGNKFDDEAFPIKHEKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGEVLNGKSVVRQIENLTTQSGDRPAKEALIVDCGELTGDAALAADVKQPDALGDPYEDFPEDCTDTLDAVAVLKIAKASKDYGNTAFKSGNYSLGLDKYQKGLRYINEEPELEDQPQSIKDELEALRFSLNNNSALLNIKLEAWDDAARSASAALEVGGVKDADRAKAFYRRGLANIHLKDEEAAVRDLTEANKLAPNDSAITRELNGVKTKAAARAAKEKAAYKKFFT

Annotated regions:
phrase: AKAFYRRGLANIHLKDEEAAVRDLTEANKLAPN
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: YKGSVFHRVIKQFMIQG
type: CONSERVED_SITE
name: Cyclophilin-type_PPIase_CS
description: Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site

phrase: LYADLVPKTADNFRS
type: DOMAIN
name: Cyclophilin-type_PPIase_dom
description: Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain

phrase: FHRVIKQFMIQG
type: DOMAIN
name: Cyclophilin-type_PPIase_dom
description: Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain

phrase: FLLSMANAGPNTNGS
type: DOMAIN
name: Cyclophilin-type_PPIase_dom
description: Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain

phrase: QFFITTVPTPHL
type: DOMAIN
name: Cyclophilin-type_PPIase_dom
description: Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain

phrase: GKHVVFGEVLNGKSV
type: DOMAIN
name: Cyclophilin-type_PPIase_dom
description: Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain

phrase: YFDISIGGKSVGRITMELYADLVPKTADNFRSLCTGEKGIGKSGKPLHYKGSVFHRVIKQFMIQGGDFTAGDGTGGESIYGNKFDDEAFPIKHEKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGEVLNGKSVVRQIENLTTQSGDRPAKEALIVDCG
type: DOMAIN
name: Cyclophilin-type_PPIase_dom
description: Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain

phrase: AKAFYRRGLANIHLKDEEAAVRDLTEANKLAPN
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: AKASKDYGNTAFKSGNYSLGLDKYQKGLRYINE
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: FDISIGGKSVGRITMELYADLVPKTADNFRSLCTGEKGIGKSGKPLHYKGSVFHRVIKQFMIQGGDFTAGDGTGGESIYGNKFDDEAFPIKHEKPFLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGEVLNGKSVVRQIENLTTQSGDRPAKEALIVDC
type: DOMAIN
name: Cyclophilin-type_PPIase_dom
description: Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain
Protein sequence:
MELKGRSISKGIIEGIAIVSKKPFSFLGGVDEEGNIIDKDSDLYGQSLKGKIFVFPYGRGSTVGSYVIYGLAKRGILKGIVNKECEPIVATGAILGGIPLVDKIDIEEIKTGDRIVVDGNTGVVKILNK

Annotated regions:
phrase: ISKGIIEGIAIVSKKPFSFLGGVDEEGNIIDKDSDLYGQSLKGKIFVFPYGRGSTVGSYVIYGLAKRGILKGIVNKECEPIVATGAILGGIPLVDKIDIEEIKTGDRIVVDGNTGVV
type: DOMAIN
name: PMDh-S-like_dom
description: Phosphomevalonate dehydratase small subunit-like domain

phrase: FSFLGGVDEEGNIIDKDSDLYGQSLKGKIFVFPYGRGSTVGSYVIYGLAKRGILKGIVNKECEPIVATGAILGGIPL
type: DOMAIN
name: PMDh-S-like_dom
description: Phosphomevalonate dehydratase small subunit-like domain
Protein sequence:
MRIVLGEIFGLKIYSYGFMIGLGIICATLLFLKRGTQRGYNEDKLFNATILTVISGILGGKILYIITEWKTVMQDPSLIFRDFGNGFVIYGAIIGGALGIALCSLKNKWNVLELADLVVPGLALAQGFGRIGCLLAGCCYGAETTSSIGIIFPADSLAPAGVPLYPTQIFSSIFDFALGLFLLWYGNKNKEKGKTMSMYMIIYSIGRFFVEFLRNDPRGSVGLLSTSQFISIFILIGGILLYNINKLKGRKETGEK

Annotated regions:
Protein sequence:
MNTISGMSSLTAIGMLTPVQSMTCLMILFVSTAMCLYSQGFVLMGMLYVTMYVGAMAMLFLFMLSLLKMEYTPQGTITPLMVTLLAMCLMPLDITYETYGMVTQMENVTDELVMVGNQLYTEYAMLLMLTGMMLMLSVMGAMSITK

Annotated regions:
Protein sequence:
MLLIKKINLQFFASKKGVGSTKNGRDSNPKYLGAKKSDGEFAKSGQIIYRQRGTKIYPGKNVGLGRDHTLFAKIDGIVKFTKFGDNKTKVSVIAK

Annotated regions:
phrase: GQIIYRQRGTKIYP
type: CONSERVED_SITE
name: Ribosomal_bL27_CS
description: Large ribosomal subunit protein bL27, conserved site
Protein sequence:
MAQIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAIDETPDFGKDVVVAADFSSTILSRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNDSMFNTPPTFAWYLSGLVFKWLKANGGVAAMDKINQQKAELLYGVIDNSDFYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKALTDFMVEFERRHG

Annotated regions:
phrase: YGVIYAGAQKNIGPAGLTI
type: BINDING_SITE
name: Aminotrans_V_PyrdxlP_BS
description: Aminotransferase class-V, pyridoxal-phosphate binding site

phrase: IFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGKEFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYWAASAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAIDETPDFGKDVVVAADFSSTILSRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKANIACPSILDYSILNDNDSMFNTPPTFAWYLSGLVFKWLKANGGVAAMDKINQQKAELLYGVIDNSDFYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLEGVKA
type: DOMAIN
name: Aminotrans_V_dom
description: Aminotransferase class V domain
Protein sequence:
MIKITFPDGAVREFESGVTTFDIAESISKSLAKKALAGKFNDQLIDTTRAIEEDGSIEIVTPDHKDAYEVLRHSAAHLFAQAAKRLFPNLHLGVGPAIAEGFYYDTDNAEGQISNEDLPCIEAEMQKIVTENYPCIREEVTKEEALELFKDDPYKVELINEHAGAGLTVYRQGEFVDLCRGPHVPSTGRIQVFHLLNVAGAYWRGNSDNNMMQRIYGTAWFDKKDLKAYLTRLEEAKERDHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPVMDMGDGEEFVLRPMNCPHHIQVYKNHVRSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIQEEFQRALQLIIDVYADFNLTDYRFRLSYRDPNDTHKYYDNDEMWENAQSMLKAALDEMDVDYFEAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLAPHQVTVIPISNEAHIDYAWEVAKTLRDRGVRADVDDRNEKMQYKIRASQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTESVEEFVENILADIARKSRPDAQA

Annotated regions:
phrase: LTVYRQGEFVDLCRGPHVPSTGRIQVFHLLNVAGAYWRGNSDNNMMQRI
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD

phrase: QVTVIPISNEAHIDYAWEVAKTLRDRGVRADVDDRNEKMQYKIRASQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTESVEEFVENI
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: MIKITFPDGAVREFESGVTTFDIAESISKSLAKKALAGKFNDQLIDTTRAIEEDGSIEIV
type: DOMAIN
name: TGS
description: TGS

phrase: IKITFPDGAVREFESGVTTFDIAESISKSLAKKALAGKFNDQLIDTTRAIEEDGSIEIV
type: DOMAIN
name: TGS
description: TGS

phrase: GEEFVLRPMNCPHHIQVYKNHVRSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIQEEFQRALQLIIDVYADFNLTDYRFRLSYRDPNDTHKYYDNDEMWENAQSMLKAALDEMDVDYFEAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFTAILIET
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: DHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPVMDMGDGEEFVLRPMNCPHHIQVYKNHVRSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIQEEFQRALQLIIDVYADFNLTDYRFRLSYRDPNDTHKYYDNDEMWENAQSMLKAALDEMDVDYFEAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFTAILIETYKGAFPTWLA
type: DOMAIN
name: ThrRS_core
description: Threonine-tRNA ligase catalytic core domain

phrase: PHQVTVIPISNEAHIDYAWEVAKTLRDRGVRADVDDRNEKMQYKIRASQTSKIPYQLIVGDKEMEDKSVNVRRYGSKATHTESVEEFVENI
type: DOMAIN
name: ThrRS_anticodon
description: Threonine-tRNA ligase, class IIa, anticodon-binding domain

phrase: DHRKLGKELDLFMISQEVGQGLPFWLPDGATIRRTLERYITDKELASGYQHVYTPPLASVELYKTSGHWDHYQEDMFPVMDMGDGEEFVLRPMNCPHHIQVYKNHVRSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHIFVTPEQIQEEFQRALQLIIDVYADFNLTDYRFRLSYRDPNDTHKYYDNDEMWENAQSMLKAALDEMDVDYFEAEGEAAFYGPKLDIQVKTALGNEETLSTIQLDFLLPERFDLKYIGADGEEHRPVMIHRGVISTMERFTAILIETYKGAF
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: LTVYRQGEFVDLCRGPHVPSTGRIQVFHLLNVAGAYWRGNSDNNMMQRI
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD
Protein sequence:
MIGRLNGILVEKQPPEILLEVSGVGYEVQMPMTCFYDLPKVGESAIVYTHFVVREDAQLLFGFNNKVERALFRELLKANGVGPKLGLAILSGMSAQQFVSCVNNEDSTSLVKLPGVGKKTAERLVLEMKDRLKNWGNDLFTPFSDSAVIEPFSDATIANNAADDAVSALVSLGYKLPQAQKAVKSVSKPDMSTEVLIKESLKSML

Annotated regions:
phrase: NAADDAVSALVSLGYKLPQAQKAVKSVSKPDMSTEVLIKESL
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal

phrase: NAADDAVSALVSLGYKLPQAQKAVKSVSKPDMSTEVLIKESLKS
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal

phrase: TSLVKLPGVGKKTAERLVL
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: RELLKANGVGPKLGLAILS
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: MIGRLNGILVEKQPPEILLEVSGVGYEVQMPMTCFYDLPKVGESAIVYTHFVVREDAQLLF
type: DOMAIN
name: DNA_helicase_Holl-junc_RuvA_I
description: DNA helicase, Holliday junction RuvA type, domain I, bacterial
Protein sequence:
MAADQRPLAIAVMGPTASGKTALAIEAAQRWGGEIVSVDSALVYRGLDIGAAKPDAAMRAAVPHHLLDLRDPWQVYSAAEFAADARTAMAQIVARGKIPILAGGTGLYFRAALEGLAQMPEADPAVRLAIAAEAEQVGWGALHAQLARIDPVAAARIHATDRQRIQRALEVYRISGKPISYWQTRPAGPRAPVRVLKLVLAPRQRAVLHARIAMRLDVMLADGFLTEVEQLRALPQMRAVAAPLDLPAVRAVGYRQAWEYLDGAGSLAESRDKAVQATRQLAKRQLTWLRGELDARWFDPERDRGQLEQAVAGFLGQRRTMQQPSAV

Annotated regions:
Protein sequence:
MLFWGTPSYAVPTLDALNDSGYEIVGVVSQPDRRRGRGNQQMASPVKQRAMDQGLRVFTPERIRDEGNVQAELKSLKADISVVVAFGQLLPSTVLNQPPLGCWNGHASLLPRWRGAGPIQWSLLSGDSVTGVGIMAMEEGLDTGPVLANQRVSIGLLENANQLSNRLSSITAKLFLESIPRIAAAGPGVESERWKQLEVIKQEEIGGDPTYARMLSKKDHILDWNQSAMDLHRRVMGLYPNAFSSWNNKRLKVQATEPLDEELKSKLSERVRPLLGRWQDGEHEPGKILACESDLGLVVSTKTCPLLIRQGQLEGKSKALGEVLIQQLQATVGQNLGVVCNI

Annotated regions:
phrase: LDWNQSAMDLHRRVMGLYPNAFSSWNNKRLKVQATEPLDEELKSKLSERVRPLLGRWQDGEHEPGKILACESDLGLVVSTKTCPLLIRQGQLEG
type: DOMAIN
name: Met-tRNA-FMT_C
description: Methionyl-tRNA formyltransferase, C-terminal domain

phrase: WGTPSYAVPTLDALNDSGYEIVGVVSQPDRRRGRGNQQMASPVKQRAMDQGLRVFTPERIRDEGNVQAELKSLKADISVVVAFGQLLPSTVLNQPPLGCWNGHASLLPRWRGAGPIQWSLLSGDSVTGVGIMAMEEGLDTGPVLANQRVSIGLLENANQLSNRLSSITAKLFL
type: DOMAIN
name: Formyl_transf_N
description: Formyl transferase, N-terminal

phrase: LFWGTPSYAVPTLDALNDSGYEIVGVVSQPDRRRGRGNQQMASPVKQRAMDQGLRVFTPERIRDEGNVQAELKSLKADISVVVAFGQLLPSTVLNQPPLGCWNGHASLLPRWRGAGPIQWSLLSGDSVTGVGIMAMEEGLDTGPVLANQRVSIGLLENANQLSNRLSSITAKLFLESIPRIAAAGPGVESERWKQLEVIKQEEIGGDPTYARM
type: DOMAIN
name: Met-tRNA-FMT_N
description: Methionyl-tRNA formyltransferase, N-terminal domain

phrase: LSKKDHILDWNQSAMDLHRRVMGLYPNAFSSWNNKRLKVQATEPLDEELKSKLSERVRPLLGRWQDGEHEPGKILACESDLGLVVSTKTCPLLIRQGQLEGKSKALGEVL
type: DOMAIN
name: Formyl_trans_C
description: Formyl transferase, C-terminal
Protein sequence:
MSGLEAQQALFASNGDAIILGRIGSLEVRLANSRAAIQAAQELRFRVFFEEMGARKETIEAVEQRDADRFDTICDHLLVYDTALPVPEHQQIVGTYRLMRNEQAEKALGFYSADEYDVQRLKLSRPNLRLLELGRSCVKPEYRSKRTVELLWQGAWAYCRRHSIDVMFGCASFHGAVPAAHALGLSFLHHNCRATDDWDVRALPHRYQAMDLMPKEAINNKVALFSMPPLVKGYLRLGAMIGDGAVIDEAFGTTDVFIILPIERISSRYISYYGAEANRFV

Annotated regions:
Protein sequence:
VTSITLDLVNPTAGQYSSFVDKIRNNVKDPNLKYGGTDIAVIGPPSKEKFLRINFQSSRGTVSLGLKRDNLYVVAYLAMDNTNVNRAYYFRSEITSAELTALFPEATTANQKALEYTEDYQSIEKNAQITQGDKSRKELGLGIDLLLTSMEAVNKKARVVKNEARFLLIAIQMTAEVARFRYIQNLVTKNFPNKFDSDNKVIQFEVSWRKISTAIYGDAKNGVFNKDYDFGFGKVRQVKDLQMGLLMYLGKPK

Annotated regions:
phrase: IQMTAEVARFRYIQNL
type: CONSERVED_SITE
name: Ribosome_inactivat_prot_CS
description: Ribosome-inactivating protein conserved site
Protein sequence:
MGKLVLATRNEKKKREILEIVEGTGFEIVTLRDFPHAPEVVEDALTFKENAIKKATAIADYTGCVTFADDSGLEVDALGGMPGVFSARFAGEPSDDERNNKMLLEMLKEVPAEKRTARFRCVIAIAFPDGRIETADGVCEGHIGLEPRGQKGFGYDPLFIPDNYQQTFGELPSETKNAISHRGQALHRAGRILRSF

Annotated regions:
Protein sequence:
MLETTMGEASPEDPPLNLKSLSQPPQKRSRTVEDFNRFCSFVLAYAGYIPPPAKEERAWTPPSSVSPHRTEESDGWDSPDPPQLPIPSDPRQPPASSDISTIETFVMKAKSQGGGGGNSENVEGPVGSGEQAQVKKGSRRKRRQRHRGGVTMSDTDTDEEERGERLAGSLPAPQLPPSAESSRDGGGSSSDADTQVMDEDIMVESGDDSWDLVTCYCEKPFAGRPMIECNICCTWVHLSCAKIRKSNVPDVYYCQKCRGGKGSGGTAPKGEP

Annotated regions:
phrase: CYCEKPFAGRPMIECNICCTWVHLSCAKIRKSNVPDVYYCQK
type: CONSERVED_SITE
name: Zinc_finger_PHD-type_CS
description: Zinc finger, PHD-type, conserved site

phrase: TCYCEKPFAGRPMIECNICCTWVHLSCAKIRKSNVPDVYYCQKC
type: DOMAIN
name: Znf_PHD
description: Zinc finger, PHD-type

phrase: CYCEKPFAGRPMIECNICCTWVHLSCAKIRKSNVPDVYYCQK
type: DOMAIN
name: Znf_PHD-finger
description: Zinc finger, PHD-finger
Protein sequence:
MSPGLQKGSRLMENRSPPSSFSIEHILGLDKKTEVASSPIIKHHRPWIQCNSEGVDGTFWHIPVISCDLPVQVHALRRSMGEETQVRLEKCCGEEDRLTYKRELSWYRGRRPRTAFTRSQIEILENVFRVNSYPGIDIREELAGKLALDEDRIQIWFQNRRAKLKRSHRESQFLMVKDSLSSKIQE

Annotated regions:
phrase: GRRPRTAFTRSQIEILENVFRVNSYPGIDIREELAGKLALDEDRIQIWFQNRRAKLKRSHRE
type: DOMAIN
name: HD
description: Homeodomain

phrase: RRPRTAFTRSQIEILENVFRVNSYPGIDIREELAGKLALDEDRIQIWFQNRRAKLKRS
type: DOMAIN
name: HD
description: Homeodomain

phrase: YRGRRPRTAFTRSQIEILENVFRVNSYPGIDIREELAGKLALDEDRIQIWFQNRRAKLKR
type: DOMAIN
name: HD
description: Homeodomain

phrase: RRPRTAFTRSQIEILENVFRVNSYPGIDIREELAGKLALDEDRIQIWFQNRRAKLK
type: DOMAIN
name: HD
description: Homeodomain

phrase: LAGKLALDEDRIQIWFQNRRAKL
type: CONSERVED_SITE
name: Homeobox_CS
description: Homeobox, conserved site
Protein sequence:
MSKFVPENVQKKLARDEKLRKAKAEQRKASSAQMKQRKAEWISKAQKYAAEYEAAEKKIVDEKRKARKTGAFYVPAEAKVAFAIRIRGVNQLHPDVKRVLRLFRLRQLHNGAFFRVNKASLNMIKRVLPFITFGYPTRNTISKLIYKRGFAKVNGQRIPLTDNTIVEKSLGKFGITCVEDLIHEITTVGPHFKEANNFLWPFKLDTPRGGFRNKRHAYHQGGDWGNREVYINDLVKAML

Annotated regions:
phrase: VPENVQKKLARDEKLRKAKAEQRKASSAQMKQRKAEWISKAQKYAAEYEAAEKKIVDEKRKARKTGAFYVP
type: DOMAIN
name: Ribosomal_uL30_N_euk
description: Large ribosomal subunit protein uL30, N-terminal, eukaryotes

phrase: VAFAIRIRGVNQLHPDVKRVLRLFRLRQLHNGAFFRVNKASLNMIKRVLPFITFGYPTRNTISKLIYKRGFAKVNGQRIPLTDNTIVEKSLGKFGITCVEDLIHEITTVGPHFKEANNFLWPFKLDTPRGGFRNKRHAYHQGGDWGNREVYINDLVKAM
type: DOMAIN
name: Ribosomal_uL30_euk_arc
description: Large ribosomal subunit protein uL30, eukaryotic/archaeal

phrase: FAIRIRGVNQLHPDVKRVLRLFRLRQLHNGAFFRVNKASLNMIKRVLP
type: DOMAIN
name: Ribosomal_uL30_ferredoxin-like
description: Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain
Protein sequence:
MRHGKVHRKFNRTAEHRKAMFANLAGALITHEQIVTTLPKAKDLRPVVEKLVTLARRGDLHARRQAIAELRDLNVVKKLFDVLAKRYEGRPGGYTRIIKAGFRYGDSTPVAVIEFVDRDVDAKGAADRARAEAAEAVAA

Annotated regions:
phrase: IVTTLPKAKDLRPVVEKLVTLA
type: CONSERVED_SITE
name: Ribosomal_bL17_CS
description: Large ribosomal subunit protein bL17, conserved site
Protein sequence:
MMNRLLVFLMLGAFMLVVSANDAYGDEPAFKDLNQGDESLGKRKSCCPCWLRGNCFWGQNCYPEGCSGPKV

Annotated regions:
phrase: KSCCPCWLRGNCFWGQNCYPEGC
type: DOMAIN
name: Neurotoxin_3_Anemonia
description: Neurotoxin 3, Anemonia
Protein sequence:
METLDLAPMIRAAGTVRLPGSKSISNRVLLLAALADGQTRVHDLLQSDDTERMLDALRTLGVPWQHDAGADCFVVDGVAGRFPVADADLFLGNAGTAFRPLTAALALSGGDYRLSGVARMHERPIGDLVDGLSQLGAAVTYTGNPGYPPLTIGKGTICAGGTVSVRGDVSSQFLTALLMAAPLTGVAVHIEVVGELISKPYIEITLNLMARFGVQVEREGWQRFTVPGGARYRSPGDIHVEGDASSASYFLAAGAMGGGPVRVEGVGRNSIQGDVRFAEALEQLGVQITMGEHWIEASAPASGRLKAFDMDLNHIPDAAMTLAVMAVRCDGPCHLRNIASWRVKETDRIAAMATELRKIGVEVEEFDDALRVTPPQTLRHAAIDTYDDHRMAMCFSLVTLAGTGVTINDPACVNKTFPGYFDAYRRIALPVPVVAIDGPSASGKGTVAARVAESLGYHYLDSGSLYRLVALATIRGGVTDDAAIAAVAEALPAEFVGGKILLSGADVTDAIRSEECAAMASKVAAIPAVRDALLERQRAYRQAPGLVAEGRDMGSVIFPDASSKFFLTASVEARAQRRYKQLMEKGLPANIDSLSQELSERDARDAARSVAPLKKLPDAVLVETSDMTVDEAVRFVAERIA

Annotated regions:
phrase: LFLGNAGTAFRPLT
type: CONSERVED_SITE
name: EPSP_synthase_CS
description: 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site

phrase: VVAIDGPSASGKGTVAARVAESLGYHYLDSGSLYRLVALATIRGGVTDDAAIAAVAEALPAEFVGGKILLSGADVTDAIRSEECAAMASKVAAIPAVRDALLERQRAYRQAPGLVAEGRDMGSVIFPDASSKFFLTASVEARAQRRYKQLMEKGLPANIDSLSQELSERDARDAARSVAPLKKLPDAVLVET
type: DOMAIN
name: Cytidylate_kinase_dom
description: Cytidylate kinase domain

phrase: AAGTVRLPGSKSISNRVLLLAALADGQTRVHDLLQSDDTERMLDALRTLGVPWQHDAGADCFVVDGVAGRFPVADADLFLGNAGTAFRPLTAALALSGGDYRLSGVARMHERPIGDLVDGLSQLGAAVTYTGNPGYPPLTIGKGTICAGGTVSVRGDVSSQFLTALLMAAPLTGVAVHIEVVGELISKPYIEITLNLMARFGVQVEREGWQRFTVPGGARYRSPGDIHVEGDASSASYFLAAGAMGGGPVRVEGVGRNSIQGDVRFAEALEQLGVQITMGEHWIEASAPASGRLKAFDMDLNHIPDAAMTLAVMAVRCDGPCHLRNIASWRVKETDRIAAMATELRKIGVEVEEFDDALRVTPPQTLRHAAIDTYDDHRMAMCFSLVTLAGTGVTINDPACVNKTFPGYF
type: DOMAIN
name: Enolpyruvate_Tfrase_dom
description: Enolpyruvate transferase domain

phrase: VAIDGPSASGKGTVAARVAESLGYHYLDSGSLYRLVALATIRGGVTDDAAIAAVAEALPAEFVGGKILLSGADVTDAIRSEECAAMASKVAAIPAVRDALLERQRAYRQAPGLVAEGRDMGSVIFPDASSKFFLTASVEARAQRRYKQLMEKGLPANIDSLSQELSERDARDAARSVAPLKKLPDAVLVETSDMTVDEAVRFVAE
type: DOMAIN
name: Cytidylate_kinase_dom
description: Cytidylate kinase domain

phrase: RVKETDRIAAMATELRKI
type: CONSERVED_SITE
name: EPSP_synthase_CS
description: 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site
Protein sequence:
MAARAPAARTLLCPAFRRTHSHDPADRQSPVPFRRLWPPCPRPRRGLPAATTSRSPSSRPTPQLHIALPTRRAGRHAPDLAALFEAVGVRHVPGVVTTIHADAARWTSPHRRRPVHPALRPLRPGRRSRLFTPPIPGLAEHAFNVDAGGVTTSTGERIRPPPSSGRGAAANPVGAADSPASMTVRARSADPFLAGDRHATASSSTGDVALAARRPRQRCRHVPASTL

Annotated regions:
Protein sequence:
MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESRVTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQIVDVTGQSKGKGFQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEIVSVDTERSVLVVKGAIPGATGGDVIVRPAIKA

Annotated regions:
phrase: FTVGQIVDVTGQSKGKGFQGGVK
type: CONSERVED_SITE
name: Ribosomal_uL3_CS
description: Large ribosomal subunit protein uL3, conserved site
Protein sequence:
METSCFTLLGLLVSLSFFLTLSAQMTGNFNCSGSTSTCQSLVGYSSKNATTLRNIQTLFAVKNLRSILGANNLPLNTSRDQRVNPNQVVRVPIHCSCSNGTGVSNRDIEYTIKKDDILSFVATEIFGGLVTYEKISEVNKIPDPNKIEIGQKFWIPLPCSCDKLNGEDVVHYAHVVKLGSSLGEIAAQFGTDNTTLAQLNGIIGDSQLLADKPLDVPLKACSSSVRKDSLDAPLLLSNNSYVFTANNCVKCTCDALKNWTLSCQSSSEIKPSNWQTCPPFSQCDGALLNASCRQPRDCVYAGYSNQTIFTTASPACPDSAGPDNYASTLSSSFNFVIVLIQCALLCLCLL

Annotated regions:
phrase: YTIKKDDILSFVATEIFGGLVTYEKISEVNKIPDPNKIEIGQKFWI
type: DOMAIN
name: LysM_dom
description: LysM domain

phrase: HVVKLGSSLGEIAAQFGTDNTTLAQLNGIIGDSQLLADKPLDV
type: DOMAIN
name: LysM_dom
description: LysM domain

phrase: HVVKLGSSLGEIAAQFGTDNTTLAQLNGIIGDSQ
type: DOMAIN
name: LysM_dom
description: LysM domain

phrase: AHVVKLGSSLGEIAAQFGTDNTTLAQLNGIIGDSQLLADKPLDV
type: DOMAIN
name: LysM_dom
description: LysM domain

phrase: EYTIKKDDILSFVATEIFGGLVTYEKISEVNKIPDPNKIEIGQKFWI
type: DOMAIN
name: LysM_dom
description: LysM domain

phrase: IEYTIKKDDILSFVATEIFGGLVTYEKISEVNKIPDPNKIEIGQKFW
type: DOMAIN
name: LysM_dom
description: LysM domain

phrase: YAHVVKLGSSLGEIAAQFGTDNTTLAQLNGIIGDSQLLADKPLD
type: DOMAIN
name: LysM_dom
description: LysM domain
Protein sequence:
MTITLGRFTKEENDLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL

Annotated regions:
phrase: NWTLNPFHMMGVAGVLGAALLCAIHG
type: CONSERVED_SITE
name: Photo_RC_L/M_CS
description: Photosynthetic reaction centre, L/M, conserved site