nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MAAVLEGQEPEETAAAAEDAATSTLEAVDAGPGAPFLPAGNQLNLDLRPGGCHRLQYLCSQQPPQLLQVEFLRLSTHEDPQLLDDTLAKVPWSLLRLRSLVLKGGQSRGALGACLHGTLTTLPAGLSDLACLAHLDLSFNRLETLPTCVPELHGLDALLLSHNHLSELPEALGALPALTFLTVTHNRLERLPLTLGSLSTLQRLDLSENLLDTIPSEIGNLRSLSELNLASNRLQSLPASLAGLRSLRLLVLHSNLLTSVPTGLVHLPLITRLDLRDNRLRDLPAELLDAPFVRLQGNPLGEASPAPPSPPDISQVPEMPRLLLTSDLDSFLVTPHGCSVTLACGVRLQFPAGATTTPVTIHYRLWLPEPGLVSLGPHDFLLSSVLELQPHGVAFQQDVSLWLLFVPPRVRRCREVVVRTRSNNTWNDLETQLEEEAPKRLWARCQVPHFSWFLVVLRPVSNTCLLPPEGALLCSSGHPGVRVTFPPGVTEEPRQVSMQVVHMAGLELRTLLEESEASVSPLLCLSQSGPPSFLQPVTVQLPLPPGVTGFSLDRSHLHLLYRTPLTTTWDDITTQVALEFTHLYARFQVTHFSWYWLWYTTKTCVGGLARKAWERLRLHRVNLIALQRRRDPEQVLLQCLPRNKVDATLSRLLVRYRGPEPSETVEMFEGEKFFAAFERGIDVDADRPDCVDGRICFVFYSHLKNVKEVYITTALDREAQDVRGQVSFYRGSLPVEVPAEAEAARQRKGTDALWMATLPIKLPRLRGA

Annotated regions:
phrase: TLQRLDLSENLLDTIPSEIGN
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: SLSELNLASNRLQSLPASLAGL
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: LAHLDLSFNRLETLPTCVPELHGLDALLLSHNHLSELPEALGALPALTFLTVTHNR
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: RSLSELNLASNRLQSLPASLAGLRSLRLLVLHSNLLTSVPTGLVHLPLITRLDLRDNR
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: LQRLDLSENLLDTIPSEIGN
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: VSNTCLLPPEGALLCSSGHPGVRVTFPPGVTEEPRQVSMQVVHMAGLELRTLLEESEASVSPLLCLSQSGPPSFLQPVTVQLPLPPGVTGFSLDRSHLHLLYRTPLTTTWDDITTQVALEFTHLYARFQVTHFSWYWLWYT
type: DOMAIN
name: ZU5_dom
description: ZU5 domain

phrase: LSTLQRLDLSENLLDTIPSEIG
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LRSLRLLVLHSNLLTSVPTGLV
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LPLITRLDLRDNRLRDLPAELLD
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LHGLDALLLSHNHLSELPEALG
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LRSLSELNLASNRLQSLPASLA
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LPALTFLTVTHNRLERLPLTLG
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LACLAHLDLSFNRLETLPTCV
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: EGALLCSSGHPGVRVTFPPGVTEEPRQVSMQVVHMAGLELRTLLEESEASVSPLLCLSQSGPPSFLQPVTVQL
type: DOMAIN
name: ZU5_dom
description: ZU5 domain

phrase: SFLVTPHGCSVTLACGVRLQFPAGATTTPVTIHYRLWLPEPGLVSLGPHDFLLSSVLELQPHGVAFQQDVSLWLLFVPPRVRRCREVVVR
type: DOMAIN
name: ZU5_dom
description: ZU5 domain

phrase: DLDSFLVTPHGCSVTLACGVRLQFPAGATTTPVTIHYRLWLPEPGLVSLGPHDFLLSSVLELQPHGVAFQQDVSLWLLFVPPRVRRCREVVVRTRSNNTWNDLETQLEEEAPKRLWARCQVPHFSWFLVVLR
type: DOMAIN
name: ZU5_dom
description: ZU5 domain
Protein sequence:
MGFDYALVHLKYTIPPAVLLTWLYRPFFTKLDVYKVGYLVSIAVASTIPWDSYLIRTGIWSYPTHVIIGPKLCDIPLEEVFFFIIQTYNTSLLYLLLSRPTFQPVYLNTERGAARRQWRYMRLAGQVFFLALIAWGWRCIRHGGLGTYTGLILVWAGPFLLMLWSLAYQFILALPVTNTALPIFLPTLYLWVVDTLALRRGTWVISTGTKYGLHLWDGLEIEEALFFLATNALIVFGQLAFDNALAVLYTFPHLFTGPSLLPSPVLLMRALLTPCSKYHDARIKGLDEAVNRLKRKSRSFYLASATFPGPLRADLLLLYSFCRVADDLVDNASDADEARAWIAKMRKFLNNVYSDKLPQSVVHSQICDDFPPSTQSALLQLPATKLSPQPLEDLLHGFEMDLAFQQGPIIRTMEDLRVYSERVAGTVAQMCIQLIFYWYPSTLDTEEKNVIVAAGNSMGVALQYVNIARDIEVDAQIGRVYLPLNWLSEAGLSYDDVLKKPNQAQIQTLRKHLLNHAFSVYEKAKDSIERLPIEARGPIRVAVESYMEIGRILRSEQYQVKAGRATVPKSRRIMVAWRTLNSK

Annotated regions:
phrase: DYALVHLKYTIPPAVLLTWLYRPFFTKLDVYKVGYLVSIAVASTIPWDSYLIRTGIWSYPTHVIIGPKLCDIPLEEVFFFIIQTYNTSLL
type: DOMAIN
name: Lycopene_cyclase_dom
description: Lycopene cyclase domain

phrase: TYTGLILVWAGPFLLMLWSLAYQFILALPVTNTALPIFLPTLYLWVVDTLALRRGTWVISTGTKYGLHLWDGLEIEEALFFLATNALIVF
type: DOMAIN
name: Lycopene_cyclase_dom
description: Lycopene cyclase domain

phrase: MGVALQYVNIARDIEVDAQIGRVYL
type: CONSERVED_SITE
name: Squalene/phytoene_synthase_CS
description: Squalene/phytoene synthase, conserved site

phrase: LKRKSRSFYLASATFPGPLRADLLLLYSFCRVADDLVDNASDADEARAWIAKMRKFLNNVYSDKLPQSVVHSQICDDFPPSTQSALLQLPATKLSPQPLEDLLHGFEMDLAFQQGPIIRTMEDLRVYSERVAGTVAQMCIQLIFYWYPSTLDTEEKNVIVAAGNSMGVALQYVNIARDIEVDAQIGRVYLPLNWLSEAGLSYDDVLKKPNQAQIQTLRKHLLNHAFSVYEKAKDSIERLPIEARGPIRVAVESYMEIGRILRSEQYQVKAGRATVPKSR
type: DOMAIN
name: Trans_IPPS_HH
description: Trans-isoprenyl diphosphate synthases, head-to-head
Protein sequence:
MGNNNPQGGNKKTFRFNLYWMYALIALSLIGVYYMNDGSSSKEVTWSEFEQIARDGGIKQITVYTNKDYLEAFLSDSTAQKVFGTGDSQKLGRSPKLYVNIPDAATFNQEVSKWKEESGFSTQIKYEKSSDFGDMFWSFGPIILLFVFWFIIMRRMSNGGGGNGGVFNVGKAKAQLFDKEGATKVSFKDVAGLSEAKQEVEEIVEFLRNPKRYNELGGKIPKGALLVGPPGTGKTLLAKAVAGEANVPFFSMSGSDFVEMFVGVGASRVRDLFRQAKEKAPCIIFIDEIDAVGRARGRNPNMGSNDERENTLNQLLTEMDGFGTNSGIIVLAATNRADILDKALLRAGRFDRQIYVELPDLNDRKEIFKVHLRGVKIDDSVDTDLLARQTPGFSGADIANVCNEAALIAARKRKQWVQKQDFMDAVDRIIGGLEKRTKITTAEEKRAIAIHEAGHASLSWFLQYANPLVKVTIVPRGKALGAAWYLPEERQITPKEAMLDEMCATLGGRAAEELFIGSISTGAANDLERVTKQAYAIVAYFGMSNELPNLSYYDSTGQEYGFTKPYSEETARIIDKEVSRIITEQYERAKKILLEHAEGHAQLAQVLIDREVIFTEDVEQIFGKRPWASRSEEILRVNEQAQKEEKEKNNENVNENNSSISGKERVDNHEVAENESSQNEESKTLSDPEKTNEPNDKVQ

Annotated regions:
phrase: ITTAEEKRAIAIHEAGHASLSWFLQYANPLVKVTIVPRGKALGAAWYLPEERQITPKEAMLDEMCATLGGRAAEELFIGSISTGAANDLERVTKQAYAIVAYFGMSNELPNLSYYDSTGQEYGFTKPYSEETARIIDKEVSRIITEQYERAKKILLEHAEGHAQLAQVLIDREVIFTEDVEQ
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: YWMYALIALSLIGVYYMNDGSSSKEVTWSEFEQIARDGGIKQITVYTNKDYLEAFLSDSTAQKVFGTGDSQKLGRSP
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular

phrase: IIVLAATNRADILDKALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: SVDTDLLARQTPGFSGADIANVCNEAALIAARKRKQWVQKQDF
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: IPKGALLVGPPGTGKTLLAKAVAGEANVPFFSMSGSDFVEMFVGVGASRVRDLFRQAKEKAPCIIFIDEIDAVGRARGRNPNMGSNDERENTLNQLLTEMDGFGTNSGIIVLAATNRADILDKALLRAGRFDRQIYVELP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LLVGPPGTGKTLLAKAVAGEANVPFFSMSGSDFVEMFVGVGASRVRDLFRQAKEKAPCIIFIDEIDAVGRARGRNPNMGSNDERENTLNQLLTEMDGFGTNSGIIVLAATNRADILDKALLRAGRFDRQIYV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core
Protein sequence:
MSSYLLVLVAILGFAYAEGDYSLCQQREKLDDDMREMFTELHNGYRAAFARNYKTSKMRTMVYDCTLEEKAYKSAEKCSEEPSSEEENVDVFSAATLNIPLEAGNSWWSEIFELRGKVYNKNGKTSNIANMVWDSHDKLGCAVVDCSGKTHVVCQYGPEAKGDGKTIYEEGAPCSRCSDYGAGVTCDDDWQNLLCIGH

Annotated regions:
phrase: DMREMFTELHNGYRAAFARNYKTSKMRTMVYDCTLEEKAYKSAEKCSEEPSSEEENVDVFSAATLNIPLEAGNSWWSEIFELRGKVYNKNGKTSNIANMVWDSHDKLGCAVVDCSGKTHVVCQYGPEAKGD
type: DOMAIN
name: CAP_dom
description: CAP domain

phrase: ELHNGYRAAFARNYKTSKMRTMVYDCTLEEKAYKSAEKCSEEPSSEEENVDVFSAATLNIPLEAGNSWWSEIFELRGKVYNKNGKTSNIANMVWDSHDKLGCAVVDCSGKTHVVCQ
type: DOMAIN
name: CAP_dom
description: CAP domain
Protein sequence:
MVVKVGINGFGRIGRIVFRNAIEHGEVNVVAVNDPFIETHYAAYMLKYDSTHGQFKGTIDVNSNGLTVNGKAVTFYQERDPASIPWGKHGVEYVVESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMFVMGVNEKTYDPSVNVLSNASCTTNCLAPLAKVINDNFGLTEGLMTTIHSYTATQKTVDGPSSKDWRGGRTAAQNIIPSSTGAAKAVGKVIPSLNGKLTGMSMRVPTANVSVVDLTCKTEKPVTYDQIKQTIKKASEGELKGILGYSEDALVSSDLNGDSRSSIFDASAGIALNDHFIKLISWYDNEWGYSRRVVDLIAYIAKVDAGK

Annotated regions:
phrase: LAPLAKVINDNFGLTEGLMTTIHSYTATQKTVDGPSSKDWRGGRTAAQNIIPSSTGAAKAVGKVIPSLNGKLTGMSMRVPTANVSVVDLTCKTEKPVTYDQIKQTIKKASEGELKGILGYSEDALVSSDLNGDSRSSIFDASAGIALNDHFIKLISW
type: DOMAIN
name: GlycerAld_3-P_DH_cat
description: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain

phrase: VKVGINGFGRIGRIVFRNAIEHGEVNVVAVNDPFIETHYAAYMLKYDSTHGQFKGTIDVNSNGLTVNGKAVTFYQERDPASIPWGKHGVEYVVESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMFVMGVNEKTYDPSVNVLSNAS
type: DOMAIN
name: GlycerAld_3-P_DH_NAD(P)-bd
description: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain

phrase: VKVGINGFGRIGRIVFRNAIEHGEVNVVAVNDPFIETHYAAYMLKYDSTHGQFKGTIDVNSNGLTVNGKAVTFYQERDPASIPWGKHGVEYVVESTGVFT
type: DOMAIN
name: GlycerAld_3-P_DH_NAD(P)-bd
description: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain

phrase: ASCTTNC
type: ACTIVE_SITE
name: GlycerAld_3-P_DH_AS
description: Glyceraldehyde 3-phosphate dehydrogenase, active site
Protein sequence:
MENSQLVSITFLAYTIIISIGSINCIDNNNLVTNQSALFVFGDSVFDAGNNNYIDTLSSVRSNYWPYGQTTFKSPTGRVSDGRLIPDFIAEYAWLPLIPPNLQPFNGNSQFAYGVNFASGGAGALVGTFSGLVINLRTQLNNFKKVEEMLRSKLGDAEGKRVISRAVYLFHIGLNDYQYPFTTNSSLFQSISNEKYVDYVVGNMTDVFKEVYNLGGRKFGILNTGPYDCAPASLVIDQTKIRSCFQPVTELINMHNEKLLNGLRRLNHELSGFKYALHDYHTSLSERMNDPSKYGFKEGKKACCGSGPLRGINTCGGRMGLSQSYELCENVTDYLFFDPFHLTEKANRQIAELIWSGPTNITGPYNLKALFELN

Annotated regions:
phrase: LFVFGDSVFDA
type: ACTIVE_SITE
name: Lipase_GDSL_AS
description: Lipase, GDSL, active site
Protein sequence:
MKFNDVYNKHHKIIHHLLKKYNISYNYDEYYQLLLIKMWQLSQIYKPSSNQSLSSFLFMRLNFYLIDLFRQQKRLNDIILCENHSPILTEQPTYFNEYDLRLQDVCALLNHRERQWLMLYLEGYKQYEIADIMSLSTSTIKLIKASVKRKCQRFFK

Annotated regions:
phrase: YNKHHKIIHHLLKKYNISYNYDEYYQLLLIKMWQLSQIYKPSSNQSLSSFLFMRLNFYLIDLFRQQK
type: DOMAIN
name: RNA_pol_sigma70_r2
description: RNA polymerase sigma-70 region 2

phrase: LNHRERQWLMLYLEGYKQYEIADIMSLSTSTIKLIKASVKR
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: LNHRERQWLMLYLE
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: GYKQYEIADIMSLSTS
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: TIKLIKASVKRK
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: KFNDVYNKHHKIIHHLLKKYNISYNYDEYYQLLLIKMWQLSQIYKPSSNQSLSSFLFMRLNFYLIDLFRQQKRLNDIILCENHSPILTEQPTYFNEYDLRLQDVCALLNHRERQWLMLYLEGYKQYEIADIMSLSTSTIKLIKASVKRKCQ
type: DOMAIN
name: RNA_pol_sigma-70_dom
description: RNA polymerase sigma-70-like domain
Protein sequence:
MPEYLLLPAGLISLSLAIAAGLYLLTARGYQSSDSVANAYDQWTEDGILEYYWGDHIHLGHYGDPPVAKDFIQSKIDFVHAMAQWGGLDTLPPGTTVLDVGCGIGGSSRILAKDYGFNVTGITISPQQVKRATELTPPDVTAKFAVDDAMALSFPDGSFDVVWSVEAGPHMPDKAVFAKELLRVVKPGGILVVADWNQRDDRQVPLNFWEKPVMRQLLDQWSHPAFASIEGFAENLEATGLVEGQVTTADWTVPTLPAWLDTIWQGIIRPQGWLQYGIRGFIKSVREVPTILLMRLAFGVGLCRFGMFKAVRKNATQA

Annotated regions:
phrase: LDVGCGIGGSSRILAKDYGFNVTGITISPQQVKRATELTPPDVTAKFAVDDAMALSFPDGSFDVVWSVEAGPHMPDKAVFAKELLRVVKPGGILV
type: DOMAIN
name: Methyltransf_11
description: Methyltransferase type 11
Protein sequence:
MQISLKWIKELIDIENVDLDDLIEKLTLGGFEVEEILELEINNEKQIALEISSTANRSDSLSIQGISVEIASLFNKQPKVCKYFNSSLNWQQKIKNLTTIRTSKTECLMFTAVILEGLEDLTVPKWIQNKLVSSGIMPLNNLVDFQNYILLETGYPFAFYDLDKVYSKVRTPTFSLSIEKAENGSEFFASNQINYKLDNSIFLVQANNIPISIAGIIENDEIICHSKTSSLLIEGSIFSASKIRQQSRKLAIRTDRSARYEKSLKSTYLIEALYRLISLLRISNPSLVYKFHSSNKVLEKVLKPIVLNYKTIVEILGPIKKRTNEHLIYISPETVTDYLKRLNFKFLFDSSTLNWEVTIPSIRSDDITREIDLIEEVGRLHGFNNFLTMLPQIKSVGRADFSYQTRKKITSYLLNMGLTELIHYSLVSNETFLKNEIKLVNPLLSDCSTLRVSLLPSLLMTIQENLKQGNSILEGFEYGHVFSGNIETTLTEIEYVGGIFGGTKIKSSWFEKGQSLKWFEAKGKIEKLFQQLNLGIHWRINSQTYTKKFLHPYRSAEIFLSSGKNIGVFGQLHPLLANKLGLSSEIYLFELNLELIQQSLQQNKLTIYSQYSVYPKIVKDLSFIIKKNIKFDELEKIIYANGTEFLSQINLLDDYKGEFIPEKHTSLCLQLTFQSNKKTLENKEIDRIVKNLKRVLELKVQAILRE

Annotated regions:
phrase: VLNYKTIVEILGPIKKRTNEHLIYISPETVTDYLKRLNFKFLFDSSTLNWEVTIPSIRSDDITREIDLIEEVGRLHG
type: DOMAIN
name: tRNA_synthase_B5-dom
description: tRNA synthetase, B5-domain

phrase: SVYPKIVKDLSFIIKKNIKFDELEKIIYANGTEFLSQINLLDDYKGEFIPEKHTSLCLQLTFQSNKKTLENKEIDRIVKNLKRVLELKVQAIL
type: DOMAIN
name: Fdx_antiC-bd
description: Ferrodoxin-fold anticodon-binding domain

phrase: SVYPKIVKDLSFIIKKNIKFDELEKIIYANGTEFLSQINLLDDYKGEFIPEKHTSLCLQLTFQSNKKTLENKEIDRIVKNLKRVLELKVQAIL
type: DOMAIN
name: Fdx_antiC-bd
description: Ferrodoxin-fold anticodon-binding domain

phrase: SVYPKIVKDLSFIIKKNIKFDELEKIIYANGTEFLSQINLLDDYKGEFIPEKHTSLCLQLTFQSNKKTLENKEIDRIVKNLKRVLELKVQAIL
type: DOMAIN
name: Fdx_antiC-bd
description: Ferrodoxin-fold anticodon-binding domain

phrase: LKPIVLNYKTIVEILGPIKKRTNEHLIYISPETVTDYLKRLNFKFLFDSSTLNWEVTIPSIRSDDITREIDLIEEVGRLHG
type: DOMAIN
name: tRNA_synthase_B5-dom
description: tRNA synthetase, B5-domain

phrase: YQTRKKITSYLLNMGLTELIHYSLVSNETFLKNEIKLVNPLLSDCSTLRVSLLPSLLMTIQENLKQGNSILEGFEYGHVFSGNIETTLTEIEYVGGIFGGTKIKSSWFEKGQSLKWFEAKGKIEKLFQQLNLGIHWRINSQTYTKKFLHPYRSAEIFLSSGKNIGVFGQLHPLLANKLGLSSEIYLFELNLEL
type: DOMAIN
name: PheRS_beta_core
description: Phenylalanyl tRNA synthetase beta chain, core domain

phrase: MLPQIKSVGRADFSYQTRKKITSYLLNMGLTELIHYSLVSNETFLKNEIKLVNPLLSDCSTLRVSLLPSLLMTIQENLKQGNSILEGFEYGHVFSGNIETTLTEIEYVGGIFGGTKIKSSWFEKGQSLKWFEAKGKIEKLFQQLNLGIHWRINSQTYTKKFLHPYRSAEIFLSSGKNIGVFGQLHPLLANKLGLSSEIYLFELN
type: DOMAIN
name: PheRS_beta_core
description: Phenylalanyl tRNA synthetase beta chain, core domain

phrase: ECLMFTAVILEGLEDLTVPKWIQNKLVSSGIMPLNNLVDFQNYILLETGYPFAFYDLDKVYSKVRTPTFSLSIEKAENGSEFFASNQINYKLDNSIFLVQANNIPISIAGIIENDEIICHSKTSSLLIEGSIFSASKIRQQSRKLAIRTDRSARYEKSLKSTYLIEALYRLISLLRIS
type: DOMAIN
name: B3/B4_tRNA-bd
description: B3/B4 tRNA-binding domain

phrase: CLMFTAVILEGLEDLTVPKWIQNKLVSSGIMPLNNLVDFQNYILLETGYPFAFYDLDKVYSKVRTPTFSLSIEKAENGSEFFASNQINYKLDNSIFLVQANNIPISIAGIIENDEIICHSKTSSLLIEGSIFSASKIRQQSRKLAIRTDRSARYEKSLKSTYLIEALYRLISL
type: DOMAIN
name: B3/B4_tRNA-bd
description: B3/B4 tRNA-binding domain

phrase: KVLKPIVLNYKTIVEILGPIKKRTNEHLIYISPETVTDYLKRLNFKFLFDSSTLNWEVTIPSIRSDDITREIDLIEEVGRLHGFNNFL
type: DOMAIN
name: tRNA_synthase_B5-dom
description: tRNA synthetase, B5-domain
Protein sequence:
MALPFQLGFQDATSPIMEELLHFHDHTLMIVFMISSLVLYLISSMLTTRLTHTSTMDAQEVETIWTILPAIILITIALPSLRILYMMDEINNPSMTIKTMGHQWYWSYEYTDYSELCFDSYMIPTSDLKSGGLRLLEVDNRVVIPMEMTVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLEMVTLNCFEKWSTSML

Annotated regions:
phrase: PSMTIKTMGHQWYWSYEYTDYSELCFDSYMIPTSDLKSGGLRLLEVDNRVVIPMEMTVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLEMVTLNCFEK
type: DOMAIN
name: CcO_II_C
description: Cytochrome c oxidase subunit 2, C-terminal

phrase: MTIKTMGHQWYWSYEYTDYSELCFDSYMIPTSDLKSGGLRLLEVDNRVVIPMEMTVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLEM
type: DOMAIN
name: CcO_II-like_C
description: Cytochrome c oxidase subunit II-like C-terminal

phrase: TSPIMEELLHFHDHTLMIVFMISSLVLYLISSMLTTRLTHTSTMDAQEVETIWTILPAIILITIALPSLRILYMMDEINNPSMTIKTMGHQWYWSYEYTDYSELCFDSYMIPTSDLKSGGLRLLEVDNRVVIPMEMTVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLEMVTLNCFEKW
type: DOMAIN
name: Cyt_c_oxidase_su2
description: Cytochrome c oxidase, subunit II

phrase: LPFQLGFQDATSPIMEELLHFHDHTLMIVFMISSLVLYLISSMLTTRLTHTSTMDAQEVETIWTILPAIILITIALPSLR
type: DOMAIN
name: Cyt_c_oxidase_su2_TM_dom
description: Cytochrome C oxidase subunit II, transmembrane domain

phrase: MALPFQLGFQDATSPIMEELLHFHDHTLMIVFMISSLVLYLISSMLTTRLTHTSTMDAQEVETIWTILPAIILITIALPSLRILYMMDEI
type: DOMAIN
name: Cyt_c_oxidase_su2_TM_dom
description: Cytochrome C oxidase subunit II, transmembrane domain

phrase: NPSMTIKTMGHQWYWSYEYTDYSELCFDSYMIPTSDLKSGGLRLLEVDNRVVIPMEMTVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSFMPIVLEMVTLNCFEKWST
type: DOMAIN
name: CcO_II-like_C
description: Cytochrome c oxidase subunit II-like C-terminal

phrase: VLHSWAVPSLGLKTDAIPGRLNQTTLLSTRPGLYYGQCSEICGSNHSF
type: BINDING_SITE
name: Copper_CuA
description: Copper centre Cu(A)
Protein sequence:
MKKGLAVVVLAAGKGTRMKSSLPKVLHPLCGRPMLDYVLDTAKALKPQHLIVVLGFGHQQVRPFIPAGIYVVVQKKLCGTADAVKEALALLKGFSGSLLVLYADTPLLRVETVKKLIGYHKANNLAATLLSANLDKPQGYGRILRDAYSAVCGIVEERDASEYQKKIKEINSGIICFDVERLREVIFKIRPDNRKGEYYLTDAISLLYKKEYVIDCVKVDDANEVLGINSRLELAKAVRCIQQRINEQHMRKGVTLVDPSSTFIDWGVKIGADTVIYPFTVIESGVKIGKGCSVGPFARLRRGTSLKDNCQVGNFIEIVRSTLFSKSKAKHFGYLGDSLIGRQVNIGAGTVTANYDGQKKHKTRIGDNSFIGSDTVLVAPVVIGRGAKTGAGCVVTKNTKVGDNSVVVGVPARLLRKG

Annotated regions:
phrase: VVVLAAGKGTRMKSSLPKVLHPLCGRPMLDYVLDTAKALKPQHLIVVLGFGHQQVRPFIPAGIYVVVQKKLCGTADAVKEALALLKGFSGSLLVLYADTPLLRVETVKKLIGYHKANNLAA
type: DOMAIN
name: MobA-like_NTP_Trfase
description: MobA-like NTP transferase

phrase: TRIGDNSFIGSDTVLVAPVVIGRGAKTGAGCVVT
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: GVKIGADTVIYPFTVIESGVKIGKGCSVGPFARL
type: REPEAT
name: Hexapep
description: Hexapeptide repeat
Protein sequence:
MDQSIADLRKNYTLTGLTEAEANPNPFVQFRLWFNQALEAQFLEPNAMTIATVTPDGKPSARMVLLKDFDERGFVFYTNYDSAKGQQLAQTPWAALVFWWDALERQVRIEGTVEKVSQEESDAYFASRPWESRLGAWVSDQSRVIESREVLENRLQALKDKYQAQDVPRPPHWGGFRVMPEKIEFWQGRPNRLHDRLCYKWIEGEKWIIERLSP

Annotated regions:
phrase: NQALEAQFLEPNAMTIATVTPDGKPSARMVLLKDFDERGFVFYTNYDSAKGQQLAQTPWAALVFWWDALERQVRIEGTVEKVSQEESDAYFASRPWESRLGAWVSDQSRVIESREVLENRLQ
type: DOMAIN
name: Pyridox_Oxase_N
description: Pyridoxamine 5'-phosphate oxidase, N-terminal

phrase: WGGFRVMPEKIEFWQGRPNRLHDRLCYKWIEGEKWIIERLS
type: DOMAIN
name: Pyridoxamine_oxidase_dimer_C
description: Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal

phrase: IEFWQGRPNRLHD
type: CONSERVED_SITE
name: Pyridox_Oxase_CS
description: Pyridoxamine 5'-phosphate oxidase, conserved site
Protein sequence:
MIEADRLIQPTALREDEVIDRAIRPKMLADYTGQDHVCEQMDIFIQAARKRSDALDHLLIFGPPGLGKTTLANIVANEMGVSIKTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRLSPVVEEILYPAMEDYQLDIMIGEGPAARSIKLELPPFTLIGATTRAGSLTSPLRDRFGIVQRLEFYNIKDLTQIVKRSAHFLELNLDEEGAMEIAKRSRGTPRISNRLLRRVRDYAEIKANGEISSDVASAALDMLDVDKEGFDYMDRKLLTTIIDKFMGGPVGLDNLAAAIGEERDTIEDVIEPFLIQQGFLQRTPRGRIVSQRAYLHFGYDYEPN

Annotated regions:
phrase: KEGFDYMDRKLLTTIIDKFMGGPVGLDNLAAAIGEERDTIEDVIEPFLIQQGFLQRTPRGRIVSQRAYLH
type: DOMAIN
name: RuvB_C
description: RuvB C-terminal winged helix domain

phrase: ALDHLLIFGPPGLGKTTLANIVANEMGVSIKTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRLSPVVEEILYPAMEDYQLDIMIGEGPAARSIKLELPPFTLIGATTRAGSLTSPLRDRFGIVQR
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: YNIKDLTQIVKRSAHFLELNLDEEGAMEIAKRSRGTPRISNRLLRRVRDYAEIKANGEISSDVASAALDMLDV
type: DOMAIN
name: AAA_lid_4
description: RuvB, AAA lid domain

phrase: IRPKMLADYTGQDHVCEQMDIFIQAARKRSDALDHLLIFGPPGLGKTTLANIVANEMGVSIKTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRLSPVVEEILYPAMEDYQLDIMIGEGPAARSIKLELPPFTLIGATTRAGSLTSPLRDRFGIVQR
type: DOMAIN
name: RuvB-like_N
description: RuvB-like P-loop domain
Protein sequence:
MLKLRKVAITGGLSCGKSSVCRILKELGAYAVSADEIVHHLLSSDVNVSQKVVDLLGKSILKNNQIHRSLLAERVFQNYRLLTGLEKILHPAVYGEIEQQYQKQQDSKNQFPFFIAEVPLLYESDGAKFFDTIISVVADPEISLQRFKTHTHKSEKEFQSRMARQISPLEKAIRADYVVLNNGTLSELQQSLRELYQELKIYI

Annotated regions:
Protein sequence:
MVIKKVNLDIVVGVTSTLPETPFPEVAFAGKSNVGKSSLINALMNRKSYARTSSQPGKTQTINFYNINDSMYLVDLPGYGYANVSPAVKAKWGKMIEKYLRKSSQLKQVFLLIDIRHDPSDNDRMMYDWIVNNGYRPVIVATKLDKIKRSQISKQVKAVRTGLGLRQEDILIPFSSQTKQGLKELWQLIDSYVLPQEENETDSESAAIIQE

Annotated regions:
phrase: EVAFAGKSNVGKSSLINALMNRKSYARTSSQPGKTQTINFYNINDSMYLVDLPGYGYANVSPAVKAKWGKMIEKYLRKSSQLKQVFLLIDIRHDPSDNDRMMYDWIVNNGYRPVIVATKLDKIKRSQISKQVKAVRTGLGLRQEDILIPFSSQTKQGLKELWQLIDSY
type: DOMAIN
name: G_ENGB_dom
description: EngB-type guanine nucleotide-binding (G) domain

phrase: EVAFAGKSNVGKSSLINALMNRKSYARTSSQPGKTQTINFYNINDSMYLVDLPGYGYANVSPAVKAKWGKMIEKYLRKSSQLKQVFLLIDIRHDPSDNDRMMYDWIVNNGYRPVIVAT
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: PFPEVAFAGKSNVGKSSLINALMNRKSYARTSSQPGKTQTINFYNINDSMYLVDLPGYGYANVSPAVKAKWGKMIEKYLRKSSQLKQVFLLIDIRHDPSDNDRMMYDWIVNNGYRPVIVATKLDKIKRSQISKQVKAVRTGLGLRQEDILIPFSSQTKQGLKELWQLIDSYVL
type: DOMAIN
name: G_ENGB_dom
description: EngB-type guanine nucleotide-binding (G) domain
Protein sequence:
MSSGNRSEAVDVQKSYEVRTYGCQMNVHDSERLSGLLEGAGYVRAPEGSDGDADVVVFNTCAVRENADNKLYGNLGRLAPMKTKRPGMQIAVGGCLAQKDRDTIVKRAPWVDVVFGTHNIGKLPVLLERARVQEEAQIEIAESLEAFPSTLPTRRESAYAAWVSISVGCNNTCTFCIVPALRGKEKDRRTGDILAEIEALVAEGVCEITLLGQNVNAYGSDIGDREAFSKLLRACGRIEGLERVRFTSPHPRDFTDDVIAAMAETPNVMPQLHMPMQSGSDTVLKAMRRSYRQERFLGIIEKVRAAMPEAAISTDIIVGFPGETEEDFEQTMHAVREARFANAFTFQYSKRPGTPAADMDGQIPKEVVQERYMRLSALQEQISWDENKKQVGRTLDVMVAEGEGRKDGATQRLSGRAPDNRLVHFTQPEKAVRPGDVVTVEITYAAPHHLLAEGTPLAVRSTRAGDAWEKRTTGAAAKPAGVMLGLPGIGAPEPLPAAGAPACGIG

Annotated regions:
phrase: KKQVGRTLDVMVAEGEGRKDGATQRLSGRAPDNRLVHFTQPEKAVRPGDVVTVEITYAAPHHLLAEGT
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: VSISVGCNNTCTFCIVPALR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: YAAWVSISVGCNNTCTFCIVPALRGKEKDRRTGDILAEIEALVAEGVCEITLLGQNVNAYGSDIGDREAFSKLLRACGRIEGLERVRFTSPHPRDFTDDVIAAMAETPNVMPQLHMPMQSGSDTVLKAMRRSYRQERFLGIIEKVRAAMPEAAISTDIIVGFPGETEEDFEQTMHAVREARFANAFTFQYSKRPGTPAADMDGQIPKEVVQERYM
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: VSISVGCNNTCTFCIVPALRGKEKDRRTGDILAEIEALVAEGVCEITLLGQNVNAYGSDIGDREAFSKLLRACGRIEGLERVRFTSPHPRDFTDDVIAAMAETPNVMPQLHMPMQSGSDTVLKAMRRSYRQERFLGIIEKVRAAMPEAAISTDIIVGFPGETEEDFEQTM
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: RESAYAAWVSISVGCNNTCTFCIVPALRGKEKDRRTGDILAEIEALVAEGVCEITLLGQNVNAYGSDIGDREAFSKLLRACGRIEGLERVRFTSPHPRDFTDDVIAAMAETPNVMPQLHMPMQSGSDTVLKAMRRSYRQERFLGIIEKVRAAMPEAAISTDIIVGFPGETEEDFEQTMHAVREARFANAFTFQYSKRPGTPAADMDGQIPKEVVQERYMRLSALQEQISWD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: EVRTYGCQMNVHDSERLSGLLEGAGYVRAPEGSDGDADVVVFNTCAVRENADNKLYGNLGRLAPMKTKRPGMQIAVGGCLAQKDRDTIVKRAPWVDVVF
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: KSYEVRTYGCQMNVHDSERLSGLLEGAGYVRAPEGSDGDADVVVFNTCAVRENADNKLYGNLGRLAPMKTKRPGMQIAVGGCLAQKDRDTIVKRAPWVDVVFGTHNIGKLPVLLERAR
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal
Protein sequence:
MRPSKRAAQDLRPVTLERNVARYAEGSCLVKFGGTHVLCTASLEDKPPPWLRGQGRGWVTAEYAMLPRATHTRTRRESMSGKPSGRTQEIQRLIGRSLRAVTNLPALGERQITLDCDVLQADGGTRTAAITGAWVALHDCCKWMHGRSIIKEFPLREHVAAVSCGIYQGEAVLDLDYEEDSVAQTDANFVMTGGGALVEVQASAEGAVFSEDELSVLLALAKGGIAQLVNIQKLAIG

Annotated regions:
phrase: VAAVSCGIYQGEAVLDLDYEEDSVAQTDANFVMTGGGALVEVQASAEGAVFSEDELSVLLALA
type: DOMAIN
name: ExoRNase_PH_dom2
description: Exoribonuclease, phosphorolytic domain 2

phrase: CDVLQADGGTRTA
type: CONSERVED_SITE
name: RNase_PH_CS
description: Ribonuclease PH, conserved site

phrase: LRPVTLERNVARYAEGSCLVKFGGTHVLCTASLEDKPPPWLRGQGRGWVTAEYAMLPRATHTRTRRESMSGKPSGRTQEIQRLIGRSLRAVTNLPALGERQITLDCDVLQADGGTRTAAITGAWVALHD
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1
Protein sequence:
MKAFSPVRSVRKNSLSDHSLGISRSKTPVDDPMSLLYNMNDCYSKLKELVPSIPQNKKVTKMEILQHVIDYILDLQIALDSHPTIVSLHHQRPGQNQTSRTPLTTLNTDISILSLQASEFPSELMSNDSKVLCG

Annotated regions:
phrase: YNMNDCYSKLKELVPSIPQNKKVTKMEILQHVIDYILDL
type: DOMAIN
name: bHLH_dom
description: Myc-type, basic helix-loop-helix (bHLH) domain

phrase: PVDDPMSLLYNMNDCYSKLKELVPSIPQNKKVTKMEILQHVIDYILDLQIALD
type: DOMAIN
name: bHLH_dom
description: Myc-type, basic helix-loop-helix (bHLH) domain

phrase: SRSKTPVDDPMSLLYNMNDCYSKLKELVPSIPQNKKVTKMEILQHVIDYILD
type: DOMAIN
name: bHLH_dom
description: Myc-type, basic helix-loop-helix (bHLH) domain
Protein sequence:
MGGKWSKSSIVGWPAIRERMRRADPAAEGVGAASQDLDKHGALTNSNTARNNDAXAWLEAQEEEEVGFPVRPQVPLRPMTYKGAFDLSFFLKEKGGLEGLIYSQQRQDILDLWVYNTQGYFPDWQNYTPGPGVRYPLTFGWCYKLVPVDPEEXEXANEGENNCLLHPISQHGMXDADREVLKWKFDIQLAHRHMAREIHPEFYKDC

Annotated regions:
Protein sequence:
MGLDGKKILIGITGGIAAYKINYLVRALVKANAEVKVIMTPYAEKFTSKLVLSTLSKNPVYSDFYNSNSEWNSHVELGLWADAMVVAPCTANTLAKMRTGLCDNILLATYLSAKCPVFIAPAMDLDMYKHPSTLSNIEALESFGNTIIPVENGELASGLSGEGRLAEPETIFQILDAHFNQQKSLDQKTILITAGPTYEAIDPVRFIGNHSSGKMGYSIAKTCAERGAKVILVSGPTNEKASHKNIEIHKVTSAKEMYKAVFKFYENVDIAIASAAVADYAPKITSKEKIKKSDDTLSIELVKNPDILKTMGEKKNHQYLVGFALETENEELNAKTKLDKKNLDMIVLNSLKDKGAGFQSDTNKIKIITKGDIIEFPVKPKNEVADDILNFIEKNIKH

Annotated regions:
phrase: KKILIGITGGIAAYKINYLVRALVKANAEVKVIMTPYAEKFTSKLVLSTLSKNPVYSDFYNSNSEWNSHVELGLWADAMVVAPCTANTLAKMRTGLCDNILLATYLSAKCPVFIAPAMDLDMYKHPSTLSNIEALESFGNTIIPVENGELASGLSGEGRLAEPETIF
type: DOMAIN
name: Flavoprotein
description: Flavoprotein

phrase: DQKTILITAGPTYEAIDPVRFIGNHSSGKMGYSIAKTCAERGAKVILVSGPTNEKASHKNIEIHKVTSAKEMYKAVFKFYENVDIAIASAAVADYAPKITSKEKIKKSDDTLSIELVKNPDILKTMGEKKNHQYLVGFALETENEELNAKTKLDKKNLDMIVLNSLKDKGAGFQSDTNKIKI
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal
Protein sequence:
MKFLFDLLPIVLFFVAFKVAEGQPDAAAAFASQHFGFLVSGGMVGPKEAPVLLATLVVIVATFAQIGWLLLRGRKVDTMLWVSLGLVTVLGGATVWFHNETFIKWKPSVLYWVMGTAFWLSHAVFRKNLLQTLMGGQLQLPPAVWRNLNFMWIAFFAFMGLANLYVAYSFPTDVWVNFKLFGGVGLMLLFTLAQGLYLSRHIKTEDE

Annotated regions:
Protein sequence:
MGGKWSKCSGGGWNAVRERMRRTEPTTEPAAAGVGAVSRDLERHGAITSTNTAATNADCAWLEAQEEEEVGFPVRPQVPLRPMTYKAAVDLSHFLKEKGGLQGLIYSQKRQDILDLWVYNTQGYFPDWQNYTPGPGTRYPLTFGWCFKLVPVEPDKVEEASAAEDNCLLHPINQHGMDDPEKEVLMWQFDSRLAFHHVAREMHPEYYKDC

Annotated regions: