nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MEEISHHFGVVGASGVHGGHQHQHHHHPWGSSLSAIVAPPPPPQLQQQQTQAGGMAHTPLTLNTAAAAVGNPVLQLANGSLLDACGKAKEASASASYAADVEAIKAKIISHPHYSSLLAAYLDCQKVGAPPEVAARLTAVAQDLELRQRTALGVLGAATEPELDQFMEAYHEMLVKYREELTRPLQEAMEFLRRVETQLNTLSISGRSLRNILSSGSSEEDQEGSGGETELPEIDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQQLLNWWELHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSDEMQFVMMDGYHPTNAAAFYMDGHFINDGGLYRLG

Annotated regions:
phrase: LAESTGLDLKQINNWFINQRKRH
type: CONSERVED_SITE
name: Homeobox_CS
description: Homeobox, conserved site

phrase: KKKKKGKLPKDARQQLLNWWELHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSDE
type: DOMAIN
name: HD
description: Homeodomain

phrase: ELKHHLLKKYSGYLSSLKQEL
type: DOMAIN
name: ELK_dom
description: ELK domain

phrase: ELDQFMEAYHEMLVKYREEL
type: DOMAIN
name: ELK_dom
description: ELK domain

phrase: TEPELDQFMEAYHEMLVKYREELTRPLQEAMEFLRRVETQLNT
type: DOMAIN
name: KNOX2
description: KNOX2

phrase: LSKKKKKGKLPKDARQQLLNWWELHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWK
type: DOMAIN
name: HD
description: Homeodomain

phrase: WWELHYKWPYPSESQKVALAESTGLDLKQINNWFINQRK
type: DOMAIN
name: KN_HD
description: KN homeodomain

phrase: ELKHHLLKKYSGYLSSLKQE
type: DOMAIN
name: ELK_dom
description: ELK domain

phrase: GVLGAATEPELDQFMEAYHEMLVKYREELTRPLQEAMEFLRRVETQLNTLS
type: DOMAIN
name: KNOX2
description: KNOX2

phrase: EAIKAKIISHPHYSSLLAAYLDCQKVGAPPEVAARLTAVAQDLE
type: DOMAIN
name: KNOX1
description: KNOX1

phrase: AIKAKIISHPHYSSLLAAYLDCQKVGAPPEVAARLTAVAQD
type: DOMAIN
name: KNOX1
description: KNOX1

phrase: DARQQLLNWWELHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKP
type: DOMAIN
name: HD
description: Homeodomain

phrase: ELKHHLLKKYSGYLSSLKQEL
type: DOMAIN
name: ELK_dom
description: ELK domain
Protein sequence:
MNIMDFNMKKLAADAGTFLSRAVQFTEEKLGQAEKTELDAHLENLLSKAECTKQWTEKIMKQTEVLLQPNPNARIEEFFYEKLDRKAPSRMNNPELLGQYMIDAGNEFGPGTAYGNALIKCGETQKQIGTADRELIQTSAINFLTPLRNFIEGDYKTITKERKLLQNKRLDLDAAKTRLKKAKVAEARAASEQEVRITQSEFDRQAEITRLLLEGISSTHAHHLRCLNDFVEAQMTYYAQCYKYMLDLQKQLGSFPSTFLSNNNQSSSAPVQSVSTPSVLASASASLPSVSNSVVTSGISELKSSSGSRKARVLYDYDAANSSELSLLADEVITVYSIPGMDSDWLMGERGNQKGKVPITYLELLN

Annotated regions:
phrase: LSRAVQFTEEKLGQAEKTELDAHLENLLSKAECTKQWTEKIMKQTEVLLQPNPNARIEEFFYEKLDRKAPSRMNNPELLGQYMIDAGNEFGPGTAYGNALIKCGETQKQIGTADRELIQTSAINFLTPLRNFIEGDYKTITKERKLLQNKRLDLDAAKTRLKKAKVAEARAASEQEVRITQSEFDRQAEITRLLLEGISSTHAHHLRCLNDFVEAQMTYYAQCYKYMLDLQKQL
type: DOMAIN
name: BAR_dom
description: BAR domain

phrase: NMKKLAADAGTFLSRAVQFTEEKLGQAEKTELDAHLENLLSKAECTKQWTEKIMKQTEVLLQPNPNARIEEFFYEKLDRKAPSRMNNPELLGQYMIDAGNEFGPGTAYGNALIKCGETQKQIGTADRELIQTSAINFLTPLRNFIEGDYKTITKERKLLQNKRLDLDAAKTRLKKAKVAEARAASEQEVRITQSEFDRQAEITRLLLEGISSTHAHHLRCLNDFVEAQMTYYAQCYKYMLDLQKQLG
type: DOMAIN
name: BAR_dom
description: BAR domain

phrase: SGSRKARVLYDYDAANSSELSLLADEVITVYSIPGMDSDWLMGERGNQKGKVPITYLELL
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: SGSRKARVLYDYDAANSSELSLLADEVITVYSIPGMDSDWLMGERGNQKGKVPITYLELL
type: DOMAIN
name: SH3GLB_SH3
description: Endophilin-B1, SH3 domain

phrase: RKARVLYDYDAANSSELSLLADEVITVYSIPGMDSDWLMGERGNQKGKVPITYLELL
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: QFTEEKLGQAEKTELDAHLENLLSKAECTKQWTEKIMKQTEVLLQPNPNARIEEFFYEKLDRKAPSRMNNPELLGQYMIDAGNEFGPGTAYGNALIKCGETQKQIGTADRELIQTSAINFLTPLRNFIEGDYKTITKERKLLQNKRLDLDAAKTRLKKAKVAEARAASEQEVRITQSEFDRQAEITRLLLEGISSTHAHHLRCLNDFVEAQMTYYAQCYKYMLDLQKQ
type: DOMAIN
name: SH3GLB1_BAR
description: Endophilin-B1, BAR domain

phrase: EEKLGQAEKTELDAHLENLLSKAECTKQWTEKIMKQTEVLLQPNPNARIEEFFYEKLDRKAPSRMNNPELLGQYMIDAGNEFGPGTAYGNALIKCGETQKQIGTADRELIQTSAINFLTPLRNFIEGDYKTITKERKLLQNKRLDLDAAKTRLKKAKVAEARAASEQEVRITQSEFDRQAEITRLLLEGISSTHAHHLRCLNDFVEAQMTYYAQCYKYMLDLQKQLGSFPSTFL
type: DOMAIN
name: BAR_dom
description: BAR domain

phrase: VLYDYDAANSSELSLLADEVITVYSIPGMDSDWLMGERGNQKGKVPITYL
type: DOMAIN
name: SH3_domain
description: SH3 domain
Protein sequence:
MIYQTDNDKLYRYLFKDRAVRGEWVRLNKTFTDTLNSHEYPRIVRNLLGEMMVATNLLTATLKFKGNITIQIQGNGPLKLLLVNGSDSQQIRALARLQDDVYDDMTLSELVGNGILVITIAPTNGERYQGVIALDKPTIAECLEDYFIRSEQLQTQLLIRSGEYEGKPVAAGLLLQIMPDGTGSQEDFEHLATLAATVKDEELFGLTAENLLYRLYHEETVEIYPPSAVEFHCGCSLERSGSALLLISDDEIENILTEHGGSIDMQCECCGTHYFFDKKTIEKLKA

Annotated regions:
Protein sequence:
MAAFAVDPQAPTLGSEPMMLGSPTSPKPGANAQFLPGFLMGDLPAPVTPQPRSISGPSVGVMEMRSPLLAGGSPPQPVVPAHKDKSGAPPVRSIYDDISSPGLGSTPLPSRRQANISVLQSPLVGVTTPVTGQSMFSPANIGQPRKTTLSPAQLDPFYTQGDSLTSEDHLDDTWVTVFGFPQASASYILLQFAQYGNILKHVMSNTGNWMHIRYQSKLQARKALSKDGRIFGESIMIGVKPCIDKNVMENSDRGVLSSPSLAFTPPIRTLGTPTQPGSTPRVSTMRPLATAYKASTSDYQVISDRQTPKKDESLVSRAMEYMFGW

Annotated regions:
phrase: EDHLDDTWVTVFGFPQASASYILLQFAQYGNILKHVMSNTGNWMHIRYQSKLQARKALSKDGRIFGESIMIGVKPCIDKNVME
type: DOMAIN
name: RRM_NUP35_dom
description: RNA-recognition motif (RRM) Nup35-type domain

phrase: HLDDTWVTVFGFPQASASYILLQFAQYGNILKHVMSNTGNWMHIRYQSKLQARKALSKDGRIFGESIMIGVKPCIDKNVM
type: DOMAIN
name: RRM_NUP35_dom
description: RNA-recognition motif (RRM) Nup35-type domain
Protein sequence:
MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGYYFSYVKAQEGQWYKMDDAEVTVCSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRPATQGELKRDHPCLQVPELDEHLVERATEESTLDHWKFPQEQNKMKPEFNVRKVEGTLPPNVLVIHQSKYKCGMKNHHPEQQSSLLNLSSMNSTDQESMNTGTLASLQGRTRRSKGKNKHSKRSLLVCQ

Annotated regions:
phrase: AGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGYYFSYVKAQEGQWYKMDDAEVTVCSITSVLSQQAYVLFYIQ
type: DOMAIN
name: USP_dom
description: Ubiquitin specific protease domain

phrase: AGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGYYFSYVKAQEGQWYKMDDAEVTVCSITSVLSQQAYVLF
type: DOMAIN
name: Peptidase_C19_UCH
description: Peptidase C19, ubiquitin carboxyl-terminal hydrolase
Protein sequence:
MHTFTRKVKWPFMFTAIGLTFGIVAVACAQPTASTVEGLFKPSSAFADRTDFSLSSILQKSLINRESFNQYLAMRLAPVLRTFYEDNYDTDIKERLNGFTADTDNAFVSQEQNLRNQFRENYLVHLQTDIFDNTGGNQAAWKLRDVNNKIIDDFISRIFAKNFVEYVQDGVGPLTKPTKSLIENTSNFKNIKLQPKFVNKNAKLKINNDAVYAAIQDKLLDQFITNENPNLVSRVVFTNETPVDGFDNYFNTKVIQSPTPSYQFQVFNKYNQQSGGTKGANGFNLLASNLKSYKNDQSKGIDIPNKFSSDSGGKLLLKASDMFDTFDPSFSAAFIQGYLALQKKSKGADSKEVDSLIKDKSIIENFFVDNNTQAAAAARAASSSSEGTIQLKTASDGGGTTQSTVHKTDLVKIFGDKDVFAGEYKQQIGNTNANQTGGGGSGGGGGTSTGSSTGSSTETTTGNSSKAVVDLIEVKKDSSSQPDYILSRGKDGIHLMAVDGGSHYLTESGRDVAKQKKFLLFRALQTKYGLVDTDTTYDFKLFDEVKKYFDTNRILFLFEALLDLSSDTNNKDNFLSYPQFKKFADSIKSIEKDLKELVQAHYKQAVFNETAVAENKVTLKLAERNQPFIDNERNNQIEQNGLAAKLPYEQDAKTGHYNDLGNYYKDIIDNVDKKGTSTVKTTSSNTGQTKNFSEEVVSKLKDNKKKVEEAAKKHVEALKVFTIPSPLYSQVILVQTKLSFTPESTSLGLNLALNNYLTSTELQNSIKLSYFQEDEAFKKIIDITNLTFSQQSGGTGGTNGNNNLTADNWKIFKETYLLDLFESQAQKSIFGHVGSSDKNSSTKTGIEGVLDTLYSSLNLEERLDSDDVIDYLSYLYTAHWLLKDNLKNYKQSLQSKLSRTSNAFLVWSVDSEKNKNDSQSTLSSTASSTSNTGLIQLRSVVSLAQNQAAGQGGDNNSDITQTEVKNPNFVFGSSVYDWTNSKTPEVNRAADDTSSFFYTKSSSSSTGAAQSSATVLRSLNQASGMTTKTAKNRYGFRGIVTSSTSGSLPEAVSRRLFKQFVNQTEKGVKVGGQMLITTAKSGKATLVLKQQADDAESTTNNAYKGALFSFGSMDNLKNIINGIQTQTEFDALYNHLTSDLNIDVTGVDKNKTLTEQKTSLTSFVDSNFKQSTQSAQRGDTSARSARSATVQIKKTQEDNQNTNYKDVFSRFDGYIGDNKVEEKNYTSYQFLSDGGKYHATFVKQVNLDDVEKIGTDSLKQEDSSKDKRLNLSLEEFLAAIALEALDPNNQTQAINALISGNKKGLVKVGDFRIFSSISAQWVRRF

Annotated regions:
Protein sequence:
MSYNSSNSGSGRYDDNRSGNSSYSSTSRGGSSYGNRSGSDRDYNRDGGSYNRDSSRDYNSSSGSGSGNGSSSYNKYPSSSSSSSSSSSTSSYGPSKGKDFQDSWGSSSTGTTNGYNGSSNGYNSSSNGYNSSNSSSSYGASNNGYNNSSGSSSSGSSGSSNGGSYNNSGSSNSNGYSKPTSNYSYSNGYTGPTTNYSSYSNGYSTPPTSTSTSSSSTTTTTTTTPSTSYNGGSTSYGYSTSGSSNGYGGYSQPPIPSYDPSSVSSYGAVTPASSSYNASVPGSSYGNSTYRSSGYGNQSYATTNSYGSSSYGSSGFYGNAKANTGSFGSALSPISWDLSKLPRFEKNFYLEHPDVSKFTQEEIEKFRASFQMTVKGREVPPPIMQFTQAPFPGYLMKEIIGAGFPNPTPIQSQAWPIALKGRDIIGLAKTGSGKTLAFLLPSIVHINAQPVLREDDGPIVLVLAPTRELALQIQEETNKFGGTSQISNTCVYGGASKHTQVAALKKGVEIVIATPGRLIDILESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLMFSATWPKEVQALAHDFLTDHIQVHIGSTEITANHNVRQIVEVCQDFEKKERMLSFLGSVGRDEKVIVFAETRKGVDDLQRVLQFSGFKSIGIHGNKSQPERDFVLSQFKNGMVPIMIATDVASRGLDIKDIKYVVNYDFPNTIEVYIHRIGRTARAGASGVSYSLLTTDNARLANELIKVLTEAKQKIPIELSNLSVTPSTSSNTKKFSPYPTYSKRY

Annotated regions:
phrase: WPIALKGRDIIGLAKTGSGKTLAFLLPSIVHINAQPVLREDDGPIVLVLAPTRELALQIQEETNKFGGTSQISNTCVYGGASKHTQVAALKKGVEIVIATPGRLIDILESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLMFSATWPKEVQALAHDFLTDHIQ
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: DDLQRVLQFSGFKSIGIHGNKSQPERDFVLSQFKNGMVPIMIATDVASRGLDIKDIKYVVNYDFPNTIEVYIHRIGRTARA
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: TPIQSQAWPIALKGRDIIGLAKTGSGKTLAFLLPSIVHINAQPVLREDDGPIVLVLAPTRELALQIQEETNKFGGTSQISNTCVYGGASKHTQVAALKKGVEIVIATPGRLIDILESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLMFSATWPKEVQ
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: KKERMLSFLGSVGRDEKVIVFAETRKGVDDLQRVLQFSGFKSIGIHGNKSQPERDFVLSQFKNGMVPIMIATDVASRGLDIKDIKYVVNYDFPNTIEVYIHRIGRTARA
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: VLDEADRM
type: CONSERVED_SITE
name: RNA-helicase_DEAD-box_CS
description: ATP-dependent RNA helicase DEAD-box, conserved site

phrase: MQFTQAPFPGYLMKEIIGAGFPNPTPIQ
type: DOMAIN
name: RNA_helicase_DEAD_Q_motif
description: RNA helicase, DEAD-box type, Q motif

phrase: GFPNPTPIQSQAWPIALKGRDIIGLAKTGSGKTLAFLLPSIVHINAQPVLREDDGPIVLVLAPTRELALQIQEETNKFGGTSQISNTCVYGGASKHTQVAALKKGVEIVIATPGRLIDILESGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPDRQTLMFSATWPKEVQALAHDFLTDHIQVHIGSTEITANHNVRQ
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: NVRQIVEVCQDFEKKERMLSFLGSVGRDEKVIVFAETRKGVDDLQRVLQFSGFKSIGIHGNKSQPERDFVLSQFKNGMVPIMIATDVASRGLDIKDIKYVVNYDFPNTIEVYIHRIGRTARAGASGVSYSLLTTDNARLANELIKVLTEAKQKIPIELSNL
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like
Protein sequence:
MNSCDFRVFLQEFGTTVHLSLPGSVSEKERLLLKLLMQGMSVTEISQYRNRSAKTISHQKKQLFEKLGIQSDITFWRDIFFQYNPEIISATGSNSHRYINDNHYHHIVTPEAISLALENHEFKPWIQPVFCAQTGVLTGCEVLVRWEHPQTGIIPPDQFIPLAESSGLIVIMTRQLMKQTADILMPVKHLLPDNFHIGINVSAGCFLAAGFEKECLNLVNKLGNDKIKLVLELTERNPIPVTPEARAIFDSLHQHNITFALDDFGTGYATYRYLQAFPVDFIKIDKSFVQMASVDEISGHIVDNIVELARKPGLSIVAEGVETQEQADLMIGKGVHFLQGYLYSPPVPGNKFISEWVMKAGG

Annotated regions:
phrase: HLSLPGSVSEKERLLLKLLMQGMSVTEISQYRNRSAKTISHQKKQLFEKLGIQSDITFWRDIFFQ
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: SEKERLLLKLLMQGMSVTEISQYRNRSAKTISHQKKQLFEKLGIQSDITFWRDI
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: EAISLALENHEFKPWIQPVFCAQTGVLTGCEVLVRWEHPQTGIIPPDQFIPLAESSGLIVIMTRQLMKQTADILMPVKHLLPDNFHIGINVSAGCFLAAGFEKECLNLVNKLGNDKIKLVLELTERNPIPVTPEARAIFDSLHQHNITFALDDFGTGYATYRYLQAFPVDFIKIDKSFVQMASVDEISGHIVDNIVELARKPGLSIVAEGVETQEQADLMIGKGVHFLQGYLYSPPV
type: DOMAIN
name: EAL_dom
description: EAL domain

phrase: AISLALENHEFKPWIQPVFCAQTGVLTGCEVLVRWEHPQTGIIPPDQFIPLAESSGLIVIMTRQLMKQTADILMPVKHLLPDNFHIGINVSAGCFLAAGFEKECLNLVNKLGNDKIKLVLELTERNPIPVTPEARAIFDSLHQHNITFALDDFGTGYATYRYLQAFPVDFIKIDKSFVQMASVDEISGHIVDNIVELARKPGLSIVAEGVETQEQADLMIGKGVHFLQGYLYSP
type: DOMAIN
name: EAL_dom
description: EAL domain

phrase: VSEKERLLLKLLMQGMSVTEISQYRNRSAKTISHQKKQLFEKLGIQS
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: HIVTPEAISLALENHEFKPWIQPVFCAQTGVLTGCEVLVRWEHPQTGIIPPDQFIPLAESSGLIVIMTRQLMKQTADILMPVKHLLPDNFHIGINVSAGCFLAAGFEKECLNLVNKLGNDKIKLVLELTERNPIPVTPEARAIFDSLHQHNITFALDDFGTGYATYRYLQAFPVDFIKIDKSFVQMASVDEISGHIVDNIVELARKPGLSIVAEGVETQEQADLMIGKGVHFLQGYLYSPPVPGNKFISEWVMK
type: DOMAIN
name: EAL_dom
description: EAL domain

phrase: PGSVSEKERLLLKLLMQGMSVTEISQYRNRSAKTISHQKKQLFEKLGIQSDITFWRD
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: HHIVTPEAISLALENHEFKPWIQPVFCAQTGVLTGCEVLVRWEHPQTGIIPPDQFIPLAESSGLIVIMTRQLMKQTADILMPVKHLLPDNFHIGINVSAGCFLAAGFEKECLNLVNKLGNDKIKLVLELTERNPIPVTPEARAIFDSLHQHNITFALDDFGTGYATYRYLQAFPVDFIKIDKSFVQMASVDEISGHIVDNIVELARKPGLSIVAEGVETQEQADLMIGKGVHFLQGYLYSPPVPGN
type: DOMAIN
name: EAL_dom
description: EAL domain
Protein sequence:
MNIPGMTTGMAPAGATAGAGFPGAGAGMQGMSEQEQAMVKAMHAAMESCPVKTVISGTMGFGLGGVFGLFMASMSYDSTFTPQGKAIMDLPWREQVRRGFKDMGSRSWSSAKNFGIVGALYSGTECCVEGLRAKNDLSNSVISGCITGGILGAKAGPQAAAAGCAGFAAFSAAIDAYMRMPSEE

Annotated regions:
Protein sequence:
MSSIRYHSSAFDDGSFSVMARNLENMVNRANAQYVKIDKHREPYTVHYNALRDKVYSEWKESGVLGTLLKGSTLCGGYGDKLKVSMPDEFDLLIHLVFPENDKIIVKADASKKGNVILDMTKVMEIIGSQEHNKPVFDLLQKIVNKKKQLLEDKLNSLLQSIMTQTLNKMGNQIEVAGRISHLEYKKCGPAHTIFVKGPCEYSVDFVPAIRLSAAQVVLAPEQRRHFGGTLYWDAIPKPMKPAKTDNASFRASFYEAERSLLLGKQSLKPAIRLLKQNRNVKNKANLKSYHIKTLFLWQVVQQDASYWSNSPKDIFIEMLGKLADSLALTPKKGKLPFFWDPKLDMFAELTDSQRTDLFNHFRKCEYTFRKDNGNVNDCTENNVHSSFSINTR

Annotated regions:
phrase: YGDKLKVSMPDEFDLLIHLVFPENDKIIVKADASKKGNVILDMTKVMEIIGSQEHNKPVFDLLQKIVNKKKQLLEDKLNSLLQSIMTQTLNKMGNQIEVAGRISHLEYKKCGPAHTIFVKGPCEYSVDFVPAIRLSAAQVVLAPEQRRHFGGTLYWDAIPKPMKPAKTDNASFRASFYEAERSLL
type: DOMAIN
name: Mab-21-like_nuc_Trfase
description: Mab-21-like, nucleotidyltransferase domain

phrase: LKPAIRLLKQNRNVKNKANLKSYHIKTLFLWQVVQQDASYWSNSPKDIFIEMLGKLADSLALTPKKGKLPFFWDPKLDMFAELTDSQRTDLFNH
type: DOMAIN
name: Mab-21_HhH/H2TH-like
description: Mab-21-like, HhH/H2TH-like domain
Protein sequence:
MPGYPRPRNVPATPLDQLGALLSEPVEPSATAAVTGITHASDEVRPGDLYAALPGARRHGAEFIADAKAAGAVAVLTDAGGADRAAVAGLPALVVADPRAVLGVVASRIYGDPTNRLAVIGITGTAGKTSTAYLIESGLRVAGRTTGLIGTVETRLGDLTIDSARTTPEATDLHACLAVALERGVDAVVMEVSSHALTLGRVGGVRFAVGGFTNLGLDHLDFHADVEDYFAAKARLFDGRCAVEIVNIDDEYGRRLVRPGTVTYSLSQGDWYPSEITDLGFAQRFVAHGPDEIAVEAGVALPGRHSVANALLAISSLVAVGVDPEVAAAGVAACQGTPGRMERVQVPGPVLGIVDYAHKPDSVAQVLAALNGRDGRGGDGRGRVICVIGAGGDRDRSKRPLMGAAAARGADVVIVTDDNPRTEDPAMIRAEVLAGACDATGGSAALIEVAGRRAAIAEAVGLAAPGDVIALLGKGHERGQEVGGEVYPFDDRDELAKALAVRFGPTAAGTADQVPAGTGGPR

Annotated regions:
phrase: VTGITHASDEVRPGDLYAALPGARRHGAEFIADAKAAGAVAVLTDAGGADRAAVAGLPALVVADPRAVLGVVAS
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: GRMERVQVPGPVLGIVDYAHKPDSVAQVLAALNGRDGRGGDGRGRVICVIGAGGDRDRSKRPLMGAAAARGADVVIVTDDNPRTEDPAMIRAEVLAGACDATGGSAALIEVAGRRAAIAEAVGLAAPGDVIALLGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: ITGTAGKTSTAYLIESGLRVAGRTTGLIGTVETRLGDLTIDSARTTPEATDLHACLAVALERGVDAVVMEVSSHALTLGRVGGVRFAVGGFTNLGLDHLDFHADVEDYFAAKARLFDGRCAVEIVNIDDEYGRRLVRPGTVTYSLSQGDWYPSEITDLGFAQRFVAHGPDEIAVEAGVALPGRHSVANALLAI
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central
Protein sequence:
MARRDMAAETMDPRASTEPSPNEPREPARYDHAAVEPRWQRAWEEGETFRAVRSADPARGKRYVLDMFPYPSGSGLHVGHPEGYTATDIMSRYFRMRGIDVLHVMGWDAFGLPAEQHALETGTHPADTTARNIATFKRQLKMLGFSYDWSRELSTTDPRYVRWTQWIFLQLFKKGLAYQDEVSVNWCPALGTVLANEEVIDGKSERGSHPVYRTPLRQWMLRITAYADRLAEDLRLLDWPEGTVAMQRSWIGRSEGALITFEVKGWGKGALSVFTTRPDTLMGVTYVVLAPEHPLTTWLTSAESGASEPRREAVRAYVAAAAGKSDRERLAAAAREKTGVDTGLVAVHPITGVEVPIWVADYVLGGYGTGAVMAVPGHDERDFSFARTYGLPIVEVVSPDGSLHDQLEAAYVDPGVAVRSGEFDGLATEECKRAVIARLEALGRGKREVNYKLRDWVFSRQRYWGEPIPIYFPVELADPQGDPRKGAAHTIRYDQPIAVDEASLPIELPPLADFRPGDDPAGPLARAVDWRFFQRDGKWYARETNTMPQWAGSCWYYLRFLDPQNDAEPFSEAAYDAWMPVDLYVGGAEHGVLHLLYARFWHKVLYDLGHVKHPEPFAKLVHQGMILGEDNEKMSKSRGNVINPDDIVRAHGADVLRMYEMFMGPLEAVKPWQSGQIQGVVRFRDRVFATCTRPLSDAMDDATSRQLHRTIKKVTGDIEGMAFNTAISAMMVFVNHLSSLPSPPREAVLRLILLVSPFAPHLAEELWRLTGHERSLSYEPWPTYDEAFCVDDVLEIPVQVNGKVRGRVMLAKAASEEEARAAALGLETVAALAAGKQLKKFIYVAGKIVNIVVG

Annotated regions:
phrase: RQLHRTIKKVTGDIEGMAFNTAISAMMVFVNHLSSLPSPPREAVLRLILLVSPFAPHLAEELWRLTGHERSLSYEPWPTYDEAFCVDDVLEIPVQVNGKVRGRVMLAKAASE
type: DOMAIN
name: M/V/L/I-tRNA-synth_anticd-bd
description: Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding

phrase: RSWIGRSEGALITFEVKGWGKGALSVFTTRPDTLMGVTYVVLAPEHPLTTWLTSAESGASEPRREAVRAYVAAAAGKSDRERLAAAAREKTGVDTGLVAVHPITGVEVPIWVADYVLGGYGTGAVMAVPGHDERDFSFARTYGLPIVEVVSPDGSLHDQLEAAYVDPGVAVRSGEFDGLATEECKRAVIAR
type: DOMAIN
name: Leu_tRNA-synth_edit
description: Leucyl-tRNA synthetase, editing domain

phrase: WYARETNTMPQWAGSCWYYLRFLDPQNDAEPFSEAAYDAWMPVDLYVGGAEHGVLHLLYARFWHKVLYDLGHVKHPEPFAKLVHQGMILGEDNEKMSKSRGNVINPDDIVRAHGADVLRM
type: DOMAIN
name: aa-tRNA-synth_Ia
description: Aminoacyl-tRNA synthetase, class Ia

phrase: FPYPSGSGLHVGHPEGYTATDIMSRYFRMRGIDVLHVMGWDAFGLPAEQHALETGTHPADTTARNIATFKRQLKMLGFSYDWSRELSTTDPRYVRWTQWIFLQLFKKGLAYQDEVSVNWCPALGTVLANEE
type: DOMAIN
name: Methionyl/Leucyl_tRNA_Synth
description: Methionyl/Leucyl tRNA synthetase
Protein sequence:
MKPMYRSRSWRRKYVRTPGGRTVIHFERRKPKVAHCAMCGRPLNGVPRGRPSELRKLPKTKKRPERPYPNLCPSCMRKVMKAQVRASITA

Annotated regions:
phrase: SRSWRRKYVRTPG
type: CONSERVED_SITE
name: Ribosomal_eL34_CS
description: Large ribosomal subunit protein eL34, conserved site
Protein sequence:
MGSTMDKIKGQANELAGKAKQGIGEATGSDKLKGEGAIQEAKGHGQQALGNAKDAVKDTADKVAGAAHKNL

Annotated regions:
phrase: DKIKGQANELAGKAKQGIGEATGSDKLKGEGAIQEAKGHGQQALGNAKDAVK
type: DOMAIN
name: CsbD
description: CsbD-like domain
Protein sequence:
MHFVAISINHRTADVTLREQVAFRDDALRLAHEDLYETKAILENVILSTCNRTEVYAIVDQVHTGRYYIQRFLARSFGFEVDDIKDMSQVKVGDDAVEHLLRVTSGLDSIVLGETQILGQMRDAFFLAQNTGTTGTIFNHLFKQAITFAKKAHSETDIADNAVSVSYAAVELAKKVFGKLKSKHAVVIGAGEMGELSLLNLLGSGISNVTIVNRTLSKAKILAEKHNVSYDSLSALPSLLETTDIVISSTSAEDYIITNSMVKTISETRKLDSLVLIDIAVPRDIEPGIDAITNIFNYDVDDLKDLVDANLRERQLAAETIAGQIPEEIDSHNEWVNMLGVVPVIRALREKAMNIQAETMESIDRKLPDLSERERKVISKHTKSIINQMLKDPIKQAKELSTDKKSNEKLELFQNIFDIEAEDPREKAKLEKESRAKEILAHRIFSFE

Annotated regions:
phrase: ISINHRTADVTLREQVAFRDDALRLAHEDLYETKAILENVILSTCNRTEVYAIVDQVHTGRYYIQRFLARSFGFEVDDIKDMSQVKVGDDAVEHLLRVTSGLDSIVLGETQILGQMRDAFFLAQNTGTTGTIFNHLFKQAITFAKKAHSE
type: DOMAIN
name: 4pyrrol_synth_GluRdtase_N
description: Glutamyl-tRNA reductase, N-terminal

phrase: ELAKKVFGKLKSKHAVVIGAGEMGELSLLNLLGSGISNVTIVNRTLSKAKILAEKHNVSYDSLSALPSLLETTDIVISSTSAEDYIITNSMVKTISETRKLDSLVLIDIAVPRDIEPGIDAITNIFNYDVDDLK
type: DOMAIN
name: Shikm_DH/Glu-tRNA_Rdtase
description: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase

phrase: IPEEIDSHNEWVNMLGVVPVIRALREKAMNIQAETMESIDRKLPDLSERERKVISKHTKSIINQMLKDPIKQAKELSTDKKSNEKLELFQNIFD
type: DOMAIN
name: 4pyrrol_synth_GluRdtase_dimer
description: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain

phrase: HLLRVTSGLDSIVLGETQILGQM
type: CONSERVED_SITE
name: GluRdtase_CS
description: Glutamyl-tRNA reductase, conserved site
Protein sequence:
MERLLIVNADDFGLSKGQNYGIIEACRNGIVTSTTALVNGQAIDHAVQLSRDEPSLAIGMHFVLTMGKPLTAMPGLTRDGVLGKWIWQLAEEDALPLEEITQELASQYLRFIELFGRKPTHLDSHHHVHMFPQIFPIVAKFAAEEGIALRIDRQPLSNDGDLPANLRSSQGFSSAFYGEEISEALFLQVLDDSSHRGERSLEVMCHPAFVDNTIRQSAYCFPRLTELDVLTSASLKYAIAERGYRLGSYHDV

Annotated regions:
Protein sequence:
MSVADIKKSAEQKMQKSIDAFKADLAKVRTGRAHTGLLDHVQVDYYGSMVPISQVANLGLADARTISVQPWEKKMVSAVERAIRDADLGLNPATMGEVIRVPMPPLTEERRKELTKVVKSEGEDAKVAVRNVRRDANEQFKKLVKDKAISEDDERRGQDEVQKLTDRFVAEVDKLVAEKDKEIMTV

Annotated regions:
phrase: FKADLAKVRTGRAHTGLLDHVQVDYYGSMVPISQVANLGLADARTISVQPWEKKMVSAVERAIRDADLGLNPATMGEVIRVPMPPLTEERRKELTKVVKSEGEDAKVAVRNVRRDANEQFKKLVKDKAISEDDERRGQDEVQKLTDRFVAEVDKLVAEKDKEI
type: DOMAIN
name: Ribosome_recyc_fac_dom
description: Ribosome recycling factor domain
Protein sequence:
MSEILKSPIQSPLLRGFVTSRRCDASEIEDLGSNVTKGLRVAGGRRVLRSHFFSYCLTYPAVNVAATTETGSGDGATEKCVYLCGNSLGLQPKRTQTRVNQYLSTWGTQGVQGHFKPLEESPLPTWLDADDRAAQLIAPIVGASKAEVAVMQTLTANLHLLMSAFYKPDINGKHKIILESKAFPSDHFAVETQLRHHNLDPATSMITLTSPSSPEDNILTTAEILSAITTHAATTALILLPGIQYYTGQLLDIPTITAHARTHSVFLIWDLAHAVGNAPLHLHDWGVDAAAWCSYKYLNGGPGCIGGLFVHERNSAVPPPVGELEVQQKEGEWEREGYANRLAGWWGNDKRTRFAMVNRFRPVPGAAGFQLSNPSILDITSLTASLEVFAEAGGVGALRGKSLRLTAFLEELLVGEGSSIVGVEERALFRVITPSDPGQRGAQLSLMLRGGLLEAVMRELEKRAVIVDERKPDVIRVAPAPLYNSFEDCVRFVVAFGEALAVARKEVAV

Annotated regions:
phrase: RAAQLIAPIVGASKAEVAVMQTLTANLHLLMSAFYKPDINGKHKIILESKAFPSDHFAVETQLRHHNLDPATSMITLTSPSSPEDNILTTAEILSAITTHAATTALILLPGIQYYTGQLLDIPTITAHARTHSVFLIWDLAHAVGNAPLHLHDWGVDAAAWCSYKYLNGGPGCIGGLFVHE
type: DOMAIN
name: Aminotrans_V_dom
description: Aminotransferase class V domain
Protein sequence:
MTTLNTNDKDLPIVKKYDSLNGTWDFLKTGVSQIFERLDEGMTITKYMELYTAIHNYCADASKTITVDNFNDQTANVLGEALYNNLVLYLEEYLARLRKECISQTNHEEQLAAYAKYWTRFTTSARFINHLFGYLNRYWVKLKNRFTETLVYDIYTLCLVSWHHHVFSHIRDSLLQNLLYMFTKKRLYEPTDMKYVEVCVDSITSLSFDKTDMTKPNLSSYKTFFETNFIENTKNFYAKESSEYLASHSITDYLKKAEIRLAEEEELVRLYLHESTLKPLLEATEDVLIAQHEEVLHNDFARMLDQNCSEDIIRMYRLMSRTPNGLQPLRQTFEEFVKRSGFAAVAKIVPQVGGEADVDPKEYMEMLLSTYKASKELVNTAFHGDTDFTKSLDTAFRELVNRNVVCQRSSSRSPELLAKYADSILRKSNKNVDIDDVEDCLSSIIIIFRYVEDKDVFQNFYTKLLAKRLVNGTSNSQDAESSMLSKLKEVCGFEYTSKLQRMFQDISLSQEITEAFWQLPQSRAGNIDFSALVLGTSFWPLSPNNVNFHLPEELVPLYEGFQNYYYSCHNGRKLSWLFHLSKGEIKARINPQTNVTYVFQVSTYQMGVLLLYNHRDSYTYEELAKITGLSTDFLTGILNIFLKAKVLLLGDNDKLGDPNSTYKINENFRMKKIRVQLNLPIRSEQKQESLETHKTIEEDRKLLLQSAIVRIMKARRTLKHVVLVKETIDQIKSRFTPKVSDIKQCIDMLIEKEYLERQGRDEYIYLA

Annotated regions:
phrase: IKQCIDMLIEKEYLERQGRDEYIYL
type: CONSERVED_SITE
name: Cullin_CS
description: Cullin, conserved site

phrase: WDFLKTGVSQIFERLDEGMTITKYMELYTAIHNYCADASKTITVDNFNDQTANVLGEALYNNLVLYLEEYLARLRKECISQTNHEEQLAAYAKYWTRFTTSARFINHLFGYLNRYWVKLKNRFTETLVYDIYTLCLVSWHHHVFSHIRDSLLQNLLYMFTKKRLYEPTDMKYVEVCVDSITSLSFDKTDMTKPNLSSYKTFFETNFIENTKNFYAKESSEYLASHSITDYLKKAEIRLAEEEELVRLYLHESTLKPLLEATEDVLIAQHEEVLHNDFARMLDQNCSEDIIRMYRLMSRTPNGLQPLRQTFEEFVKRSGFAAVAKIVPQVGGEADVDPKEYMEMLLSTYKASKELVNTAFHGDTDFTKSLDTAFRELVNRNVVCQRSSSRSPELLAKYADSILRKSNKNVDIDDVEDCLSSIIIIFRYVEDKDVFQNFYTKLLAKRLVNGTSNSQDAESSMLSKLKEVCGFEYTSKLQRMFQDISLSQEITEAFWQLPQSRAGNIDFSALVLGTSFWPLSPNNVNFHLPEELVPLYEGFQNYYYSCHNGRKLSWLFHLSKGEIKARINPQTNVTYVFQVSTYQMGVLLLYNHRDSYTYEELAKITGLSTDFLTGILNIFLKAKVLLLGDNDKLGDPNSTYKINEN
type: DOMAIN
name: Cullin_N
description: Cullin, N-terminal

phrase: DRKLLLQSAIVRIMKARRTLKHVVLVKETIDQIKSRFTPKVSDIKQCIDMLIEKEYLERQG
type: DOMAIN
name: Cullin_neddylation_domain
description: Cullin protein, neddylation domain

phrase: IEEDRKLLLQSAIVRIMKARRTLKHVVLVKETIDQIKSRFTPKVSDIKQCIDMLIEKEYLERQGRDE
type: DOMAIN
name: Cullin_neddylation_domain
description: Cullin protein, neddylation domain

phrase: RSPELLAKYADSILRKSNKNVDIDDVEDCLSSIIIIFRYVEDKDVFQNFYTKLLAKRLVNGTSNSQDAESSMLSKLKEVCGFEYTSKLQRMFQDISLSQEITEAFWQLPQSRAGNIDFSALVLGTSFWPLSPNNVNFHLPEELVPLYEGFQNYYYSCHNGRKLSWLFHLSKGEIKARINPQTNVTYVFQVSTYQMGVLLLYNHRDSYTYEELAKITGLSTDFLTGILNIF
type: DOMAIN
name: Cullin_homology
description: Cullin homology domain

phrase: SSIIIIFRYVEDKDVFQNFYTKLLAKRLVNGTSNSQDAESSMLSKLKEVCGFEYTSKLQRMFQDISLSQEITEAFWQLPQSRAGNIDFSALVLGTSFWPLSPNNVNFHLPEELVPLYEGFQNYYYSCHNGRKLSWLFHLSKGEIKAR
type: DOMAIN
name: Cullin_homology
description: Cullin homology domain