nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MYVVLAVSLSEEQALKQVCPSCDATQSCNCSSMGLDFIPSGLTDKITLLDLARNRIKHIRAHDLQQAVNLRTLLLQSNKISSIDEDSFVSLGKLELLDLSNNRLAHLSPRWFDHLVSLQHLHIHGNCYSDLGESSPFSSLRNLSSLHLGNPRFSTIRQGNFEGITLLDQLWIEGSNLSVYEPGSLKSIKKINHMIISIRRVDLFSAIVRDLLHSAIWLEIREIKLDIENEKLVQNSTLPLTIQKMTFTRASFSDKYASQIMVLLKEITSLRELESIDSVLEGNGNWNTELIKVSGQSSVETVSVTNMTILHFYLFLDLKGLESQISKLKRLSIASSKVFMVPCSLARNFLSLVYLDFHDNLLVNNRLSETICKDAWPSLQTLNLSKNSLKSLNQTAKYVTNLPKLNNLDISQNNFGEIPDVCEWPAKLKYLNLSRTRISKLTACIPSTLEVLDISANNLKEFNLHLPFLKELYLAKNQLKALPDAASIPNLVAMSIGRNKLSSFSKEELESFKKMELLDVSANNFICSCEFLSFIQHQAGIGQMLVGWPEGYICDSPLAVRGAQVGAIHLSLMECHQSLVVSLICAVFFLVILVLVAIGYKYHAVWYMRMTWAWLRAKRKPKRAPPKDICYDAFVSYSENDSNWVENVMVQELEQACPPFRLCLHKRDFVPGKWIVDNIIDSIEKSHKTLFVLSEHFVQSEWCKYELDFSHFR

Annotated regions:
phrase: YDAFVSYSENDSNWVENVMVQELEQACPPFRLCLHKRDFVPGKWIVDNIIDSIEKSHKTLFVLSEHFVQSEWCKYE
type: DOMAIN
name: TIR_dom
description: Toll/interleukin-1 receptor homology (TIR) domain

phrase: NLRTLLLQSNKISSIDEDSFV
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: CYDAFVSYSENDSNWVENVMVQELEQACPPFRLCLHKRDFVPGKWIVDNIIDSIEKSHKTLFVLSEHFVQSEWCKYELDFSHF
type: DOMAIN
name: TIR_dom
description: Toll/interleukin-1 receptor homology (TIR) domain

phrase: ICYDAFVSYSENDSNWVENVMVQELEQACPPFRLCLHKRDFVPGKWIVDNIIDSIEKSHKTLFVLSEHFVQSEWCKYELDFSHF
type: DOMAIN
name: TIR_dom
description: Toll/interleukin-1 receptor homology (TIR) domain

phrase: LPKLNNLDISQNNFGEIPDVCEW
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LGKLELLDLSNNRLAHLSPRWFD
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LPFLKELYLAKNQLKALPDAASI
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LVSLQHLHIHGNCYSDLGESSPF
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: WPSLQTLNLSKNSLKSLNQTAK
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: VNLRTLLLQSNKISSIDEDSFV
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LRNLSSLHLGNPRFSTIRQGNFE
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: NLRTLLLQSNKISSIDEDSFVSLGKLELLDLSNNRLAHLSPRWFDHLVSLQHLHIHG
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: PSLQTLNLSKNSLKSLNQTAKYVTNLPKLNNLDISQNNFGEIPDVCEWPAKLKYLNLSRTR
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: LKELYLAKNQLKALPDAASIPNLVAMSIGRNKLSSFSKEELESFKKMELLDVSANN
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: SLQTLNLSKNSLKSLNQTAKY
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: KLNNLDISQNNFGEIPDVCEW
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: DVSANNFICSCE
type: BINDING_SITE
name: EF_Hand_1_Ca_BS
description: EF-Hand 1, calcium-binding site

phrase: NNFICSCEFLSFIQHQAGIGQMLVGWPEGYICDSPLAVRGAQVGAIHLSLMEC
type: DOMAIN
name: Cys-rich_flank_reg_C
description: Cysteine-rich flanking region, C-terminal
Protein sequence:
MSTEQELQIGKVVKSHGIRGEVVVELSTDDPDIRFAIGEVLNGKQAGKEHSLTIDAARMHQGRLLVKFAEVPDRTAADSLRGTRFFAAPLEDEDDEDGFYDHELEGLRVIHEGEDIGEVTGVMHGPAGEILEVRLTSGKETLIPFVHAIVPEVDLEEGTATITPPEGLLDL

Annotated regions:
phrase: HELEGLRVIHEGEDIGEVTGVMHGPAGEILEVRLTSGKETLIPFVHAIVPEVDLEEGTATITPPEG
type: DOMAIN
name: PRC_RimM
description: Ribosome maturation factor RimM, PRC barrel domain

phrase: QIGKVVKSHGIRGEVVVELSTDDPDIRFAIGEVLNGKQAGKEHSLTIDAARMHQGRLLVKFAEVPDRTAADSLRGTRFF
type: DOMAIN
name: RimM_N
description: RimM, N-terminal
Protein sequence:
MRVRGTQRNYQQWWIWGILGFWMLIMCNGKEKMWVTVYYGVPVWREAKATLFCASDAKAYEKEVHNVWATHACVPTDPNPQELVLINVTENFNMWKNDMVEQMHEDIISLWDESLKPCVKLTPICVTLNCSNVTLSKSNDTYTTAKMNPLNITNEMKNCSFNVTAEIRNKKRTEYALFYRLDIVSLNGESNETSNEYRLINCNSSTVTQACPKVNFDPIPIHYCAPAGYAILKCNNKTFNGTGPCNNVSTVQCTHGIKPVGSTQLLLNGSLAEKDIIIRSENLTNNAKIIIVHLNESVQINCTRPANTRIKRLGIGPGQAFRTVKQIIGDIRQSHCNISAWQWNRTLQRVSEKLKKHFPNKTFIKFQPPSGGDLEITTHSFNCGGEFFYCNTSNLFNRTYNSTDKSDRFNSTDNSTITIQCRIRQFINMWQRVGRAMYAPPIEGNITCKSKITGLLLTRDGGEGNKNDTNDTEIFRPGGGDMRDNWRSELYKYKVVEIKPLGLAPTKAKRRVVEREKRAVGIGALFLGVLGVAGSTMGAASITLTVQARQLLSGIVQQQNNLLRAIEAQQHMLQLTVWGIKQLQARVLAIERYLQDQRLLGIWGCSGKLICTTNVPWNSSWSNRTYDDIWNNTTWMQWDREINNYSNIIHWLLEDSQIQQEKNEQELLALDKWNNLWSWFDITNWLWYIRIFIMIVGGLIGLRIIVAVLSIVNRVRQGYSPLSFQTLNPSPREPDRLGRIEEEGGEQDRNKSIRLVSGFLALAWDDLR

Annotated regions:
phrase: MGAASITLTVQARQLLSGIVQQQNNLLRAIEAQQHMLQLTVWGIKQLQARVLAIERYLQDQRLLGIWGCSGKLICTTNVPWNSSWSNRTYDDIWNNTTWMQWDREINNYSNIIHWLLEDSQIQQEKNEQELLALDKWNNLWSWFDITNWLWYIRIFIMIVGGLIGLRIIVAVLSIVNRVRQGYSPLSFQT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MWVTVYYGVPVWREAKATLFCASDAKAYEKEVHNVWATHACVPTDPNPQELVLINVTENFNMWKNDMVEQMHEDIISLWDESLKPCVKLTPICVTLNCSNVTLSKSNDTYTTAKMNPLNITNEMKNCSFNVTAEIRNKKRTEYALFYRLDIVSLNGESNETSNEYRLINCNSSTVTQACPKVNFDPIPIHYCAPAGYAILKCNNKTFNGTGPCNNVSTVQCTHGIKPVGSTQLLLNGSLAEKDIIIRSENLTNNAKIIIVHLNESVQINCTRPANTRIKRLGIGPGQAFRTVKQIIGDIRQSHCNISAWQWNRTLQRVSEKLKKHFPNKTFIKFQPPSGGDLEITTHSFNCGGEFFYCNTSNLFNRTYNSTDKSDRFNSTDNSTITIQCRIRQFINMWQRVGRAMYAPPIEGNITCKSKITGLLLTRDGGEGNKNDTNDTEIFRPGGGDMRDNWRSELYKYKVVEIKPLGLAPTKAKRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: VQARQLLSGIVQQQNNLLRAIEAQQHMLQLTVWGIKQLQARVLAIERYLQDQRLLGIWGCSGKLICTTNVPWNSSWSNRTYDDIWNNTTWMQWDREINNYSNIIHWLLEDSQIQQEKNEQELLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MTTRFSAFLSGTPCELDLHRFPATSDPNLQAWDAADEHLLKYLNESNTELAAKFLVINDSFGALTCALATARSDADIVFAADGRTAHLGCKANLASNGLASAKVDYQDCTNLGSFAKGRQILMKLPKNLNFLTDTLSQLSQTLAAGDVILMGAKAKHINQSLLALIAKAVGPATASLTWKKTRIITITADGNPRPVSKPSVWDVPEHGLKVTNLSNVFAASKLDIGARLMMANLPQGHFSSVIDLGCGNGVLALKAAQTYPDARLYLVDESAMAVESARQNWALNALDEGRAEFIWDDCLSHLPNEVQADLVLCNPPFHQGEAITDHIAWQMFNDAKRALKPGGLLHIVGNRHLGYHIKLKRLFGNCKTIASNGKFVILQAVK

Annotated regions:
phrase: LKVTNLSNVFAASKLDIGARLMMANLPQGHFSSVIDLGCGNGVLALKAAQTYPDARLYLVDESAMAVESARQNWALNALDEGRAEFIWDDCLSHLPNEVQADLVLCNPPFHQGEAITDHIAWQMFNDAKRALKPGGLLHIVGNRHLGYHIKLKRLFGNCKTIASNGKFVIL
type: DOMAIN
name: Small_mtfrase_dom
description: Methyltransferase small domain

phrase: VLCNPP
type: CONSERVED_SITE
name: DNA_methylase_N6_adenine_CS
description: DNA methylase, N-6 adenine-specific, conserved site
Protein sequence:
MRSGVIAQKVGMTRVYNDAGEHVPVTVLRMDGCQVVATRTVEKNGYTAVQLGAGQAKVKNTSKAMRGNFAVANVEPKAKLAEFRVSEDNLLEIGTELKADHFAAGQLVDVTGTTIGKGFAGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVVSTDEDRGLILIKGAVPGSKGAWIIVRDAVKSAAK

Annotated regions:
phrase: FAAGQLVDVTGTTIGKGFAGAMK
type: CONSERVED_SITE
name: Ribosomal_uL3_CS
description: Large ribosomal subunit protein uL3, conserved site
Protein sequence:
MGFHIYEIKARQIIDSRGNPTVEADVILEDGTCGRSAVPSGASTGINEAVELRDGDKSVYMGKGVLKAIENIKNIIAPELEGMSALNQVAIDRKMLELDGTPTKEKLGANAILAVSMATAKAAAKYLGLKVYQYLGAYKANILPTPMCNIINGGAHSDNSVDFQEFMIMPVGAKTFSEAIRMAVEVFHTLKGILNGKGYATSVGDEGGFAPNLKSNEEACEMIIEAIKKAGYEPGKDIAIALDPATSELYDPKTKKYVLKWSTKEELTSEQMVEYWSKWVEKYPIISIEDGMAEEDWDGWKKLTDKIGHKIQLVGDDLFVTNTSFLKKGIEMGVANSILIKVNQIGTLTETFEAVEMAKKAGYTAIVSHRSGETEDTTIADLVVALGTGQIKTGSLSRTDRIAKYNQLIRIEEELETTAEYHGKNVFYSIKQKQIKSL

Annotated regions:
phrase: IYEIKARQIIDSRGNPTVEADVILEDGTCGRSAVPSGASTGINEAVELRDGDKSVYMGKGVLKAIENIKNIIAPELEGMSALNQVAIDRKMLELDGTPTKEKLGANAILAVSMATAKAAAKYLGLKVYQY
type: DOMAIN
name: Enolase_N
description: Enolase, N-terminal

phrase: NILPTPMCNIINGGAHSDNSVDFQEFMIMPVGAKTFSEAIRMAVEVFHTLKGILNGKGYATSVGDEGGFAPNLKSNEEACEMIIEAIKKAGYEPGKDIAIALDPATSELYDPKTKKYVLKWSTKEELTSEQMVEYWSKWVEKYPIISIEDGMAEEDWDGWKKLTDKIGHKIQLVGDDLFVTNTSFLKKGIEMGVANSILIKVNQIGTLTETFEAVEMAKKAGYTAIVSHRSGETEDTTIADLVVALGTGQIKTGSLSRTDRIAKYNQLIRIEEELETTAEYHGKNVF
type: DOMAIN
name: Enolase_C
description: Enolase, C-terminal TIM barrel domain

phrase: IYEIKARQIIDSRGNPTVEADVILEDGTCGRSAVPSGASTGINEAVELRDGDKSVYMGKGVLKAIENIKNIIAPELEGMSALNQVAIDRKMLELDGTPTKEKLGANAILAVSMATAKAAAKYLGLKVYQY
type: DOMAIN
name: Enolase_N
description: Enolase, N-terminal

phrase: ANILPTPMCNIINGGAHSDNSVDFQEFMIMPVGAKTFSEAIRMAVEVFHTLKGILNGKGYATSVGDEGGFAPNLKSNEEACEMIIEAIKKAGYEPGKDIAIALDPATSELYDPKTKKYVLKWSTKEELTSEQMVEYWSKWVEKYPIISIEDGMAEEDWDGWKKLTDKIGHKIQLVGDDLFVTNTSFLKKGIEMGVANSILIKVNQIGTLTETFEAVEMAKKAGYTAIVSHRSGETEDTTIADLVVALGTGQIKTGSLSRTDRIAKYNQLIRIEEELETTAEYHGKNVFY
type: DOMAIN
name: Enolase_C
description: Enolase, C-terminal TIM barrel domain

phrase: ILIKVNQIGTLTE
type: CONSERVED_SITE
name: Enolase_CS
description: Enolase, conserved site
Protein sequence:
MDYLESLDFPKVVEIVKKYALSDLGRKHLDTLKPTVNPWDELELVEELLNYFARWGEPPIKGLNDISQEVERVKSGSALEPWELLRVSVFLEGCDILKKDFEKREYSRLKETFSRLSSFRDFVEEVNRCIEQDGEISDRASPRLREIRTEKKRLSSEIKRKADDFVRTHSQILQEQMYVYRDGRYLFPVKASMRNAVRGIVHHLSSSGATVFLEPDEFVELNNRVRLLEEEERLEISRILRQLTNILLSRLNDLERNVELIARFDSLYARVKFAREFNGTVVKPSSRIRLVNARHPLIPKERVVPINLELPPNKRGFIITGPNMGGKTVTVKTVGLFTALMMSGFPLPCDEGTELKVFPKIMADIGEEQSIEQSLSTFSSHMKKIVEIVKNADSDSLVILDELGSGTDPVEGAALAVAIIEDLLEKGATIFVTTHLTPVKVFAMNHPLLLNASMEFDPETLSPTYRVLVGVPGGSHAFQIAEKLGLDKRIIENARSRLSREEMELEGLIRSLHEKISLLEEEKRKLQKEREEYMKLREKYEEDYKKLRRMKIEEFDKELRELNDYIRKVKKELDQAIHVAKTGSVDEMREAVKTIEKEKKDLEQKRIEEATEEEIKPGDHVKMEGGTSVGKVVEVKSGTALVDFGFLRLKVPVSKLKKAKKEEKEESSAVSYRPSSFRTEIDIRGMTVEEAEPVVKKFIDDLMMNGISKGYIIHGKGTGKLASGVWEILRKDKRVVSFRFGTPSEGGTGVTVVEVKV

Annotated regions:
phrase: IDIRGMTVEEAEPVVKKFIDDLMMNGISKGYIIHGKGTGKLASGVWEILRKDKRVVSFRFGTPSEGGTGVTVVEV
type: DOMAIN
name: Smr_dom
description: Smr domain

phrase: RTEIDIRGMTVEEAEPVVKKFIDDLMMNGISKGYIIHGKGTGKLASGVWEILRKDKRVVSFRFGTPSEGGTGVTVVEV
type: DOMAIN
name: Smr_dom
description: Smr domain

phrase: IITGPNMGGKTVTVKTVGLFTALMMSGFPLPCDEGTELKVFPKIMADIGEEQSIEQSLSTFSSHMKKIVEIVKNADSDSLVILDELGSGTDPVEGAALAVAIIEDLLEKGATIFVTTHLTPVKVFAMNHPLLLNASMEFDPETLSPTYRVLVGVPGGSHAFQIAEKLGLDKRIIENARSRL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: KRGFIITGPNMGGKTVTVKTVGLFTALMMSGFPLPCDEGTELKVFPKIMADIGEEQSIEQSLSTFSSHMKKIVEIVKNADSDSLVILDELGSGTDPVEGAALAVAIIEDLLEKGATIFVTTHLTPVKVFAMNHPLLLNASMEFDPETLSPTYRVLVGVPGGSHAFQIAEKLGLDKRIIENARSRL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: IDIRGMTVEEAEPVVKKFIDDLMMNGISKGYIIHGKGTGKLASGVWEILRKDKRVVSFRFGTPSEGGTGVTVVEV
type: DOMAIN
name: Smr_dom
description: Smr domain

phrase: PGDHVKMEGGTSVGKVVEVKSGTALVDFGFLRLKVPVSK
type: DOMAIN
name: MSSS
description: MutS2 and Smr-associated SH3 domain

phrase: LDFPKVVEIVKKYALSDLGRKHLDTLKPTVNPWDELELVEELLNYFARWGEPPIKGLNDISQEVERVKSGSALEPWELLRVSVFLEGCDILKKDFEKREYSRLKETFSRLSSFRDFVEEVNRCIEQDGEISDRASPRLREIRTEKKRLSSEIKRKADDFVRTHSQILQEQMYVYRDGRYLFPVKASMRNAVRGIVHHLSSSGATVFLEPDEFVELNNRVRLLEEEERLEISRILRQLTNILLSRLNDLERNVELIARFDSLYARVKFAREFNGTVVKPSSRIRLVNARHPLIPK
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: SLVILDELGSGTDPVE
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal
Protein sequence:
MEQTLVIQKKKGFGFSQGIGITLLIAIAAKYLAELPFLNIMGQLVIAILIGMVWRAAIGVPHDAIAGTNFASKKLLRFGIILLGMRLNLVDIAKAGPKVLVIAAVVITFTIFVVYGLTKVFKVEKKLGILTACGTAICGAAAVVAIAPQVKAKDDETAVGAAIIAILGTIFTLIYTLLYPVLGLSPYGYGVFSGATLHEIAHVIAAAAPGGSTAVDIAVIVKLTRVAMLVPVAILIGLWFGKSEGSEGKRSWRELPIPWFIFGFLAMSAVHSLGIIPEVVAGYIVVLAYMLIAMAMAGLGLNVEFKTFRKLGSKAFVAGLIGSVCLSVLGYVLVYALGFM

Annotated regions:
Protein sequence:
MSKRETFNETFLKAARGEKADHTPVWYMRQAGRSQPEYRKLKEKYGLFEITHQPELCAYVTRLPVEQYGVDAAILYKDIMTPLPSIGVDVEIKNGIGPVIDQPIRSLADIEKLGQIDPEQDVPYVLETIKLLVNEQLNVPLIGFSGAPFTLASYMIEGGPSKNYNKTKAFMYSMPDAWNLLMSKLADMIIVYVKAQIEAGAKAIQIFDSWVGALNQADYRTYIKPVMNRIFSELAKENVPLIMFGVGASHLAGDWHDLPLDVVGLDWRLGIDEARSKGITKTVQGNLDPSILLAPWEVIEQKTKEILDQGMESDGFIFNLGHGVFPDVSPEVLKKLTAFVHEYSQNKKMGQYS

Annotated regions:
phrase: IGFSGAPFTLASYMIE
type: DOMAIN
name: Uroporphyrinogen_deCOase
description: Uroporphyrinogen decarboxylase (URO-D)

phrase: FNETFLKAARGEKADHTPVWYMRQAGRSQPEYRKLKEKYGLFEITHQPELCAYVTRLPVEQYGVDAAILYKDIMTPLPSIGVDVEIKNGIGPVIDQPIRSLADIEKLGQIDPEQDVPYVLETIKLLVNEQLNVPLIGFSGAPFTLASYMIEGGPSKNYNKTKAFMYSMPDAWNLLMSKLADMIIVYVKAQIEAGAKAIQIFDSWVGALNQADYRTYIKPVMNRIFSELAKENVPLIMFGVGASHLAGDWHDLPLDVVGLDWRLGIDEARSKGITKTVQGNLDPSILLAPWEVIEQKTKEILDQGMESDGFIFNLGHGVFPDVSPEVLKKLTAFVHE
type: DOMAIN
name: Uroporphyrinogen_deCOase
description: Uroporphyrinogen decarboxylase (URO-D)

phrase: PVWYMRQAG
type: DOMAIN
name: Uroporphyrinogen_deCOase
description: Uroporphyrinogen decarboxylase (URO-D)
Protein sequence:
MKCILDLNKEQLQPYFQSIKQPDFRWKQVWHGLYVSYLDAWQKFSVLPLELREQLAQDFSISPLQEIDSINSPDGFTKKVLFQLPGGNPLESVLMRYDDRVSICISSQSGCSIGCEFCATGKLGWKQDLSSGEIVAQILYFAKELTEDQQKITNIVIMGMGEPFLNYAQIKKAILTMNDHDGLNIGSRRITVSTIGIPQQIIQFAQDFPQVNLAVSLHASTDEQRNKLIPINRKFTIEDILTALKQYISITNRRVTFEYVLIADFNDSVEDALRLGKLLQGFLCHVNLIPLNSTAHFNRKPSSREKTEVFQKILNDHHIPATIRFSKGTRIQAGCGQLTGKLS

Annotated regions:
phrase: ILDLNKEQLQPYFQSIKQPDFRWKQVWHGLYVSYLDAWQKFSVLPLELREQLAQDFS
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: YDDRVSICISSQSGCSIGCEFCATGKLGWKQDLSSGEIVAQILYFAKELTEDQQKITNIVIMGMGEPFLNYAQIKKAILTMNDHDGLNIGSRRITVSTIGIPQQIIQFAQDFPQVNLAVSLHASTDEQRNKLIPINRKFTIEDILTALKQYISITNRRVTFEYVLIADFNDSVEDALRLGKLLQGFLCHVNLIPLNSTAHFNRKPSSREKTEVFQKILNDHHIPATIRFSKGT
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SSQSGCSIGCEFCATGKLGWKQDLSSGEIVAQILYFAKELTEDQQKITNIVIMGMGEPFLNYAQIKKAILTMNDHDGLNIGSRRITVSTIGIPQQIIQFAQDFPQVNLAVSLHASTDEQRNKLIPINRKFTIEDILTALKQYISITNRRVTFEYVLIADFNDSVEDALR
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MRRVTVLGATGSIGRSTLDVMARHPDRYELYAATAHSNLNELFSICIKHRPRYAILATDAGLAGFKKRLRDAGVSTEVRVGVEAMCEASSASDVDVVVAAIVGAAGLVPTLAAVNSGKRILLANKEALVMTGRLFMDAVRRHGAELLPIDSEHNAIYQCLPEAGQHLSDMTSLAAYGVTRVLLTASGGPFRHFSQQQLQQVTPEQACRHPNWSMGRKISVDSASLMNKGLELIEACWLFDLTPGSVQVHLHPESIIHSMVEYVDGSILAQMGNPDMRTPIAYGLAWPERIDAGVQPLDLFSIGKLHFEMPDKERFPCLRLAEEAFSLGGTAPAVVNAANEVAVEAFLQGDIRFVDIPVVIEKSLLKGSIVDADSVETVIEADRVARQYASEAINELAGGVVVP

Annotated regions:
phrase: MGNPDMRTPIAYGLAWPERIDAGVQPLDLFSIGKLHFEMPDKERFPCLRLAEEAFSLGGTAPAVVNAANEVAVEAFLQGDIRFVDIPVVIEKSLLKGSIVDADSVETVIEADRVARQ
type: DOMAIN
name: DXPR_C
description: DXP reductoisomerase, C-terminal domain

phrase: LLPIDSEHNAIYQCLPEAGQHLSDMTSLAAYGVTRVLLTASGGPFRHFSQQQLQQVTPEQACRHPNWSMGRKISVDSASLMNKGLELIEACWL
type: DOMAIN
name: DXP_reductoisomerase_C
description: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal

phrase: VTVLGATGSIGRSTLDVMARHPDRYELYAATAHSNLNELFSICIKHRPRYAILATDAGLAGFKKRLRDAGVSTEVRVGVEAMCEASSASDVDVVVAAIVGAAGLVPTLAAVNSGKRILLANKEALVMT
type: DOMAIN
name: DXP_reductoisomerase_N
description: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal
Protein sequence:
MSEFKVKTGLAQMLKGGVIMDVVTPEQAIIAERAGACAVMALERIPADMRKSGQVCRMSDPRMIKEIMEAVSIPVMAKVRIGHFVEAQILEELQVDYIDESEVLTPADWTHHIEKHNFKVPFVCGAKDLGEALRRINEGAAMIRTKGEAGTGDVSEAVKHITKIKAEIQQYKENLKTESDFAAKATELRVPVDLLKTTLSEGKLPVVNFAAGGVATPADAALLMQLGCEGVFVGSGIFKSSDPEKLACAIVEATTHYDNPAKLLQISSDLGDLMGGISIQSINEAGGKNGARLSEIGW

Annotated regions:
phrase: FKVKTGLAQMLKGGVIMDVVTPEQAIIAERAGACAVMALERIPADMRKSGQVCRMSDPRMIKEIMEAVSIPVMAKVRIGHFVEAQILEELQVDYIDESEVLTPADWTHHIEKHNFKVPFVCGAKDLGEALRRINEGAAMIRTKGEAGTGDVSEAVKHITKIKAEIQQYKENLKTESDFAAKATELRVPVDLLKTTLSEGKLPVVNFA
type: DOMAIN
name: PdxS/SNZ_N
description: PdxS/SNZ N-terminal domain
Protein sequence:
MDYSDDDMIDNESGEENNSDGGGNESYNYNAAVDTIILSEKSYVIIKEEEILKLQRDDIERVSTILFLSQVEAIVLLLHYHWCVSKLEDEWFTDEERIRKTVGILKEPVVDVNGTEVDIQCGICFESYTRKEIASVSCGHPYCKTCWTGYITTKIEDGPGCLRVKCPEPSCYAVVGQDMIDEVTEKKDKDKYYRYFLRSYVEDGKKMKWCPSPGCECAVEFGESSGYDVACLCSYRFCWNCSEDAHSPVDCETVSKWIFKNQDESENKNWILANSKPCPKCKRPIEKSHGCNHMTCSASCGHRFCWICGKSYSDHYACNNYVEDADHDKRTLLQSEIKRYTHYYVRWVENQSSRLKAMSDLEKFQSVQLKQLSDNQCKPKIDLQFIVDAWLQIIECRRVLKWTYAYGYYLDNLAKRPLFEYLQGEAETGLERLHHCAENELKQFFIKSEDPSDTFNAFRMKLTGLTKVTKTYFDNLVKALENGLADVTKSSEESADFLETQKLYDAYISEGCFF

Annotated regions:
phrase: VDIQCGICFESYTRKEIASVSCGHPYCKTCWTGYITTKIEDGPGCLRVKCPEPSCYAVVGQDMIDEVTEKKDKDKYYRYFLRSYVEDGKKMKWCPSPGCECAVEFGESSGYDVACLCSYRFCWNCSEDAHSPVDCETVSKWIFKNQDESENKNWILANSKPCPKCKRPIEKSHGCNHMTCSASCGHRFCWICGKSYSDHYACNNY
type: DOMAIN
name: TRIAD_supradom
description: TRIAD supradomain

phrase: CGICFESYTRKEIASVSCGHPYCKTCWTGYITTKIEDGPGCLRVKC
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: KNQDESENKNWILANSKPCPKCKRPIEKSHGCNHMTCSASCGHRFCWICGKSYSDHYA
type: DOMAIN
name: IBR_dom
description: IBR domain

phrase: DKYYRYFLRSYVEDGKKMKWCPSPGCECAVEFGESSGYDVACLCSYRFCWNCSEDAHSPVD
type: DOMAIN
name: IBR_dom
description: IBR domain

phrase: QSEIKRYTHYYVRWVENQSSRLKAMSDLEKFQSVQLKQLSDNQCKPKIDLQFIVDAWLQIIECRRVLKWTYAYGYYLDNLAKRPLFEYLQGEAETGLERLHHCAENELKQFFIKSEDPSDTFNAFRMKLTGLTKVTKTYFDNLVKALENGLA
type: DOMAIN
name: Ariadne
description: Ariadne domain

phrase: DKYYRYFLRSYVEDGKKMKWCPSPGCECAVEFGESSGYDVACLCSYRFCWNCSEDAHSPVD
type: DOMAIN
name: IBR_dom
description: IBR domain
Protein sequence:
MAAAEPSVAALAGGGVGAGAPSGGVPVLFCFSVFARPASVPHGAGYDVLIQKFLSLYGDQVDMHRKFVVQLFAEEWGQYVDLPKGFAVSERCKLRLVPLQIQLTTLGNLTPPSTVFFCCDMQERFRPAIKYFGDIISVGQRLLQGARILGIPVIITEQYPKGLGSTVQEIDLTGVKLVLPKTKFSMVLPEVEAALAEIPGVRSVVLFGVETHVCIQQTALELVGRGIEVHIVADATSSRSMMDRMFALERLARTGIIVTTSEAVPLQLVADKDHPKFKEIQNLIKASAPESGLLSKV

Annotated regions:
phrase: TVFFCCDMQERFRPAIKYFGDIISVGQRLLQGARILGIPVIITEQYPKGLGSTVQEIDLTGVKLVLPKTKFSMVLPEVEAALAEIPGVRSVVLFGVETHVCIQQTALELVGRGIEVHIVADATSSRSMMDRMFALERLARTGIIVTTS
type: DOMAIN
name: Isochorismatase-like_dom
description: Isochorismatase-like domain
Protein sequence:
MKKPEKITSRTANFAKWYVDVITQADLMNYGPIKGTIYFKPLGYKIWENIVKIVNAYFVKQKIENVYFPLLIPQDFIEKEKKHIEGFAPELLTITKVGGKNLVENIYIRPTSELLFADYFKAEIAKNNILPIKLNQWSQVLRWEKTTNPFLRNTEFLWQEGHTIHASKVEADQFAKKIARFYKYFLENYLAIPVISGQKTEREKFAGAVNTYTVEAMMQNFRALQSATAHFLGQNFAKNFEIFYKNKENKSQIPFQTSWGLSTRLIGAIVMVHSDDNGLIFPPKIAPIQVDILEFFSKKNQEVKIFAKKIAKILKNAKISYKIDDTDQQIGYKINNSEVHGAPIRIEIGPNEVKNNQICLVRRDNHQKFFFNIDLLKEKCRKILEQIQADLFKKAKIRLLENTVFVNSINEFEQAIKNNKFVIAPFSESPEREQEIQEKTGATARCILPKNSFFALPQTGNSIFSGEKTNKFVLFAKSY

Annotated regions:
phrase: INEFEQAIKNNKFVIAPFSESPEREQEIQEKTGATARCILPKNSFFALPQTGNSIFSGEKTNKFVLFAKS
type: DOMAIN
name: Pro-tRNA_ligase_II_C
description: Proline-tRNA ligase, class II, C-terminal

phrase: NEFEQAIKNNKFVIAPFSESPEREQEIQEKTGATARCILPKNSFFALPQTGNSIFSGEKTNKFVLFAKS
type: DOMAIN
name: Pro-tRNA_ligase_II_C
description: Proline-tRNA ligase, class II, C-terminal

phrase: VENIYIRPTSELLFADYFKAEIAKNNILPIKLNQWSQVLRWEKTTNPFLRNTEFLWQEGHTIHASKVEADQFAKKIARFYKYFLENYLAIPVISGQKTEREKFAGAVNTYTVEAMMQNFRALQSATAHFLGQNFAKNFEIFYKNKENKSQIPFQTSWGLSTRLIGAIV
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: GTIYFKPLGYKIWENIVKIVNAYFVKQKIENVYFPLLIPQDFIEKEKKHIEGFAPELLTITKVGGKNLVENIYIRPTSELLFADYFKAEIAKNNILPIKLNQWSQVLRWEKTTNPFLRNTEFLWQEGHTIHASKVEADQFAKKIARFYKYFLENYLAIPVISGQKTEREKFAGAVNTYTVEAMMQNFRALQSATAHFLGQNFAKNFEIFYKNKENKSQIPFQTSWGLSTRLIGAIVMVHSDDNGLIF
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: NFAKWYVDVITQADLMNYGPIKGTIYFKPLGYKIWENIVKIVNAYFVKQKIENVYFPLLIPQDFIEKEKKHIEGFAPELLTITKVGGKNLVENIYIRPTSELLFADYFKAEIAKNNILPIKLNQWSQVLRWEKTTNPFLRNTEFLWQEGHTIHASKVEADQFAKKIARFYKYFLENYLAIPVISGQKTEREKFAGAVNTYTVEAMMQNFRALQSATAHFLGQNFAKNFEIFYKNKENKSQIPFQTSWGLSTRLIGAIVM
type: DOMAIN
name: ProRS_core_arch_euk
description: Prolyl-tRNA synthetase, catalytic domain

phrase: KKNQEVKIFAKKIAKILKNAKISYKIDDTDQQIGYKINNSEVHGAPIRIEIGPNEVKNNQICLVRRDNHQKFFFNIDLLKEKC
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding
Protein sequence:
MTHMPARPVDGAEPLSALPAGPMRQAGTQRSGIYEISKVLTAPARLEITLANVVNVLSSFLQIRCGAIVVLDAEGQPEIAATGDIPPSSQSAARGVIPKAVIDHIATTGMPLIVKDVSKSELFQAEPQPPWSSGTVPISFIGVPVKADNKILGTISIDRVRNDAAPFPADEDVRFLTMVANLVSRTIRLHRFLNLEGRRPIGEQERPEKPIIAQRGAPGRHPPVKIDGIIGDSPALQQVVETVSVVARTNSTVLLRGESGTGKEFFAQAIHELSPRKNKPFVKLNCAALPEGVLESELFGHEKGAFTGAIAQRAGRFELANGGTLLLDEIGEISPAFQAKLLRVLQEGELERVGGTKTLAVDVRLICATNKNLEMAVANAEFRADLYYRISVVPIVLPPLRERPGDIPRLANALLDRFNKENQRELTFSSSAIEVMSQCYFPGNVRELENCVRRTATLARSSSIVSSDFACKNSQCLSSLLWKTDGSPGGITVDGHARSNVMPTSSPRSGGSIGASDEVSSVKACDPHGSGCPAMESRLTQRDRLIEAMEKAGWVQAKAARILGLTPRQVGYALRQHRIEVKKL

Annotated regions:
phrase: GRFELANGGTLLLDE
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_2
description: Sigma-54 interaction domain, ATP-binding site 2

phrase: DRLIEAMEKAGWVQAKA
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: ARILGLTPRQVGYALRQHRI
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: IIGDSPALQQVVETVSVVARTNSTVLLRGESGTGKEFFAQAIHELSPRKNKPFVKLNCAALPEGVLESELFGHEKGAFTGAIAQRAGRFELANGGTLLLDEIGEISPAFQAKLLRVLQEGELERVGGTKTLAVDVRLICATNKNLEMAVANAEFRADLYYRISVVPIVLPPLRERPGDIPRLANALLDRFNKENQRELTFSSSAIEVMSQCYFPGNVRELENCVRRTA
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: IIGDSPALQQVVETVSVVARTNSTVLLRGESGTGKEFFAQAIHELSPRKNKPFVKLNCAALPEGVLESELFGHEKGAFTGAIAQRAGRFELANGGTLLLDEIGEISPAFQAKLLRVLQEGELERVGGTKTLAVDVRLICATNKNLEMAVANAEFRADLYYRISVVP
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: RLEITLANVVNVLSSFLQIRCGAIVVLDAEGQPEIAATGDIPPSSQSAARGVIPKAVIDHIATTGMPLIVKDVSKSELFQAEPQPPWSSGTVPISFIGVPVKADNKILGTISIDRVRNDAAPFPADEDVRFLTMVANLVSRTIRLHRFLNLE
type: DOMAIN
name: GAF
description: GAF domain

phrase: TNSTVLLRGESGTGKEFFAQAIHELSPRKNKPFVKLNCAALPEGVLESELFGHEKGAFTGAIAQRAGRFELANGGTLLLDEIGEISPAFQAKLLRVLQEGELERVGGTKTLAVDVRLICATNKNLEMAVANAEFRADLYYRIS
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: QRDRLIEAMEKAGWVQAKAARILGLTPRQVGYALR
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: FPGNVRELE
type: CONSERVED_SITE
name: Sigma_54_int_dom_CS
description: Sigma-54 interaction domain, conserved site

phrase: LEITLANVVNVLSSFLQIRCGAIVVLDAEGQPEIAATGDIPPSSQSAARGVIPKAVIDHIATTGMPLIVKDVSKSELFQAEPQPPWSSGTVPISFIGVPVKADNKILGTISIDRVRNDAAPFPADEDVRFLTMVANLVSRT
type: DOMAIN
name: GAF
description: GAF domain

phrase: VLLRGESGTGKEF
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_1
description: Sigma-54 interaction domain, ATP-binding site 1
Protein sequence:
MATFSQKPAEVEKKWVIIDAEGLVVGRLASIIAMRLRGKHKATFTPHVDDGDNVIVINADKVVFTGKKYSDKVYYWHTGFAGGIKERTARQIIEGRFPERVLEKAVERMVPRGPLGRRQMKNLRVYAGSNHPHEAQQPVALDVAVLNKKNVRSA

Annotated regions:
Protein sequence:
MTVQIITIDGPSGSGKGTLAAKLAAYYQFHLLDSGALYRLLGLSLHKHDLLEKLDSHLDECVNYARQLNIKFETSAEGTLVFLDGEDVTQTIRTERVGEYASKVAAIPELRQALFERQRAFAQTPGLVADGRDMATSIFPEANAKIYLTASAESRAERRVKQLQGMGLDAKINDILANIQARDKRDMEREVAPLKPAGDAYIIDSSELTIDQVFKLMVDYVNSRTVSN

Annotated regions:
phrase: ITIDGPSGSGKGTLAAKLAAYYQFHLLDSGALYRLLGLSLHKHDLLEKLDSHLDECVNYARQLNIKFETSAEGTLVFLDGEDVTQTIRTERVGEYASKVAAIPELRQALFERQRAFAQTPGLVADGRDMATSIFPEANAKIYLTASAESRAERRVKQLQGMGLDAKINDILANIQARDKRDMEREVAPLKPAGDAYIIDSSELTIDQVFKLMVDYV
type: DOMAIN
name: Cytidylate_kinase_dom
description: Cytidylate kinase domain

phrase: IITIDGPSGSGKGTLAAKLAAYYQFHLLDSGALYRLLGLSLHKHDLLEKLDSHLDECVNYARQLNIKFETSAEGTLVFLDGEDVTQTIRTERVGEYASKVAAIPELRQALFERQRAFAQTPGLVADGRDMATSIFPEANAKIYLTASAESRAERRVKQLQGMGLDAKINDILANIQARDKRDMEREVAPLKPAGDAYIIDS
type: DOMAIN
name: Cytidylate_kinase_dom
description: Cytidylate kinase domain
Protein sequence:
MFIISSKNMLQKAQHAGYAVPAFNIHNLETLQVVVETAAEMRSPLIVAGTPGTFSYAGMGNIVAIAGDLAREYNLPLAIHLDHHESLADIESKVMAGIRSVMIDGSHFPFEENVALVKSVVDFCHRYDTSVEAELGRLGGIEDDLVVDSKDALYTNPQQAREFVARTGIDSLAVAIGTAHCMYAAEPKLDFERLAEIRALVDIPLVLHGASGLPESDIRQAISLGVCKVNVATELKIAFSDALKEYFLQNPKANDPRHYMQPAKQAMKEVVRKVIHVCGCEGQL

Annotated regions:
Protein sequence:
MGMISEFKAFAVKGNVVDMAVGIIIGAAFGKIVSSFVGDIIMPPLGILIGGVDFSDLAITLKAAEGDIPAVVLAYGKFIQTVIDFVIVAFAIFMGVKAINRLKREEAVAPSAPPTPTPQETLLTEIRDLLKSQNQNRLP

Annotated regions:
phrase: KGNVVDMAVGIII
type: CONSERVED_SITE
name: Mechanosensitive_channel_CS
description: Large-conductance mechanosensitive channel, conserved site