Protein sequence:
MGAKNSVLRGKKADELEKIRLRPGGKKKYRLKHIVWAANELDRFGLTESLLESKEGCQKIISVLEPLVPTGSENLKSLYNTTCVIWCLHAEEKVKDTEEAKRIVGRHLVAETETAEKMPNISRPTAPPSGKGGNFPVQQIGGNYVHLPLSPRTLNAWVKLVEEKKFGAEVVPGFQALSEGCTPYDINQMLNCVGDHQAAMQIIREIINEEAADWDVQHPIPGPLPAGQLRDPRGSDIAGTTSTVEEQIEWMYRQENPVPVGNIYRRWIQIGLQKCVRMYNPTNILDIKQGPKESFQSYVDRFYKSLRAEQTDAAVKNWMTQTLLVQSNPDCKLVLKGLGMNPTLEEMLTACQGIGGPGQKARLMAEALKEAMRPAPIPFAAAQQKRAIKCWNCGKEGHSARQCRAPRRQGCWKCGKSGHIMANCPDRQAGFLRAWTMGKEAPQLPRGPKFAGANTNSTPNGSSSGPTGEVHAAREKTERAETKTIQRSDRGLAASRARRDTTQRDDRGLAAPQFSLWKRPVVTAYIEDQPVEVLLDTGADDSIVAGIELGSNYSPKIVGGIGGFINTKEYKDVEIRVLNKKVRATIMTGDTPINIFGRNILTALGMSLNLPVAKIEPVKVTLKPGKDGPKQRQWPLTREKIEALREICEKMEREGQLEEAPPTNPYNTPTFAIKKKDKNKWRMLIDFRELNKVTQDFTEVQLGIPHPAGLAKKRRITVLDVGDAYFSIPLYEDFRQYTAFTLPSVNNAEPGKRYIYKVLPQGWKGSPAIFQYTMRQVLEPFRKANPDVIIVQYMDDILIASDRTDLEHDKVVLQLKELLNGLGFSTPDEKFQKDPPYQWMGYELWPTKWKLQKIQLPQKEVWTVNDIQKLVGVLNWAAQIYPGIKTKHLCKLIRGKMTPTEEVQWTELAEAELEENKIILSQEQEGHYYQEEKELEATVQKDQDNQWTYKVHQGEKILKVGKYAKIKNTHTNGVRLLAQVVQKIGKEALVIWGRIPKFHLPVERETWEQWWDNYWQVTWIPDWDFVSTPPLVRLAFNLVKDPIPGAETFYTDGSCNRQSKEGKAGYITDRGKDKVRILEQTTNQQAELEAFAMAVTDSGPKVNIVVDSQYVMGIVTGQPAESESRIVNKIIEEMIKKEAIYVAWVPAHKGIGGNQEIDHLVSQGIRQVLFLERIEPAQEEHGKYHSNVKELAHKFGLPNLVARQIVNTCAQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWVGIEQSFGVPYNPQSQGVVEAMNHHLKNQIERIREQANTMETIVLMAVHCMNFKRRGGIGDMTPVERLVNMITTEQEIQFLQAKNSKLKNFRVYFREGRNQLWQGPGELLWKGDGAVIVKVGTDIKVIPRRKAKIIRDYGPRQEMDSGSHLEGAREDGEMA

Annotated regions:
phrase: KNSVLRGKKADELEKI
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: RPGGKKKYRLKHIVWAAN
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: DRFGLTESLLESKEG
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: TGSENLKSLYNTTCVIWCL
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: HAEEKVKDTEEAK
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: CWKCGKSGHIMANCP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: GCWKCGKSGHIMANC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: IKCWNCGKEGHSARQC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: ERIEPAQEEHGKYHSNVKELAHKFGLPNLVARQIVNTCAQC
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: GCWKCGKSGHIMANCP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: KCWNCGKEGHSARQCR
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: VLLDTGADDSI
type: ACTIVE_SITE
name: Aspartic_peptidase_AS
description: Aspartic peptidase, active site

phrase: AQEEHGKYHSNVKELAHKFGLPNLVARQIVNTCAQCQ
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: VYFREGRNQLWQGPGELLWKGDGAVIVKVGTDIKVIPRRKAKI
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: IPGAETFYTDGSCNRQSKEGKAGYITDRGKDKVRILEQTTNQQAELEAFAMAVTDSGPKVNIVVDSQYVMGIVTGQPAESESRIVNKIIEEMIKKEAIYVAWVPAHKGIGGNQEIDHLVSQGI
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: KCWNCGKEGHSARQC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: YYQEEKELEATVQKDQDNQWTYKVHQGEKILKVGKYAKIKNTHTNGVRLLAQVVQKIGKEALVIWGRIPKFHLPVERETWEQWWDNYWQVTWIPDWDFVS
type: DOMAIN
name: RVT_connect
description: Reverse transcriptase connection

phrase: MYNPTNILDIKQGPKESFQSYVDRFYKSLRAEQTDAAVKNWMTQTLLVQSNPDCKLVLKGLGMNPTLEEMLT
type: DOMAIN
name: Gag_p24_C
description: Retroviral nucleocapsid Gag protein p24, C-terminal domain

phrase: AETFYTDGSCNRQSKEGKAGYITDRGKDKVRILEQTTNQQAELEAFAMAVTDSGPKVNIVVDSQYVMGIVTGQPAESESRIVNKIIEEMIKKEAIYVAWVPAHKGIGGNQEIDHLVSQG
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: VTAYIEDQPVEVLLDTGADDSIVAGIELGSNYSPKIVGGIGGFINTKEYKDVEIRVLNKKVRATIMTGDTPINIFGRNIL
type: DOMAIN
name: Retropepsin-like_cat_dom
description: Retropepsin-like catalytic domain

phrase: VEVLLDTGADDSIVAGIELGSNYSPKIVGGIGGFINTKEYKDVEIRVLNKKVRATIMTGDTPINIFGRN
type: DOMAIN
name: Peptidase_A2_cat
description: Peptidase A2A, retrovirus, catalytic

phrase: AELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWVGIEQSFGVPYN
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: IKKKDKNKWRMLIDFRELNKVTQDFTEVQLGIPHPAGLAKKRRITVLDVGDAYFSIPLYEDFRQYTAFTLPSVNNAEPGKRYIYKVLPQGWKGSPAIFQYTMRQVLEPFRKANPDVIIVQYMDDILIASDRTDLEHDKVVLQLKELLNGLGFSTPDEKFQKDPPYQWMGY
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: FRVYFREGRNQLWQGPGELLWKGDGAVIVKVGTDIKVIPRRKAKIIR
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: GAKNSVLRGKKADELEKIRLRPGGKKKYRLKHIVWAANELDRFGLTESLLESKEGCQKIISVLEPLVPTGSENLKSLYNTTCVIWCLHAEEKVKDTEEAKRIVGRHLVAETETAEKMPNI
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: QVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWVGIEQSFGVPYNPQSQGVVEAMNHHLKNQIERIREQANTMETIVLMAVHCMNFKRRGGIGDMTPVERLVNM
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: LQKIQLPQKEVWTVNDIQKLVGVLNWAAQIYPGIKTKHLCKLIRGKMTPTEEVQWTELAEAEL
type: DOMAIN
name: RVT_thumb
description: Reverse transcriptase thumb

phrase: WKRPVVTAYIEDQPVEVLLDTGADDSIVAGIELGSNYSPKIVGGIGGFINTKEYKDVEIRVLNKKVRATIMTGDTPINIFGRNILTALGMS
type: DOMAIN
name: Retropepsins
description: Retropepsins

phrase: EGQLEEAPPTNPYNTPTFAIKKKDKNKWRMLIDFRELNKVTQDFTEVQLGIPHPAGLAKKRRITVLDVGDAYFSIPLYEDFRQYTAFTLPSVNNAEPGKRYIYKVLPQGWKGSPAIFQYTMRQVLEPFRKANPDVIIVQYMDDILIASDRTDLEHDKVVLQLKELLNGLGFSTPDEKFQKDPPYQWMGYE
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain