nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MLSKSNQPSDALLDADFSFSQPPFSTLIDSRVLVALADQKFAHPTLVQAKAIPLLLEGKDVLARARTGSGKTAAYIVPAVQKILEAKADLSPASAEYQATRAIILVPTKELALQVSSFTKNVTKYCDGLVQCVDVAAGGASIQRVLLNDKPDIVISTPTKLLSLLQSKSLSLSQLSFLAIDEADLLLSYGFKDDLTRIMDPTSGWIPKLGVQGCLMSATLSDDVEGIKGLVLRNPAILTLSEPASASSLLSQHYTHTSERDKFLLIYVLLKLKLIRGKSIIFVNDVERGYRVKLFLEQFGVKCCVVNSELPLASRYHVVEEFNRGVYDVVVATDEGAGADAEEEEDVKQEESESEGEEDEDDDKEAEDKEKEAKEEAKPAPGPSKRRATSPPSKPNKRARRADPTSSLARGIDFTSASSVINFDLPLTSTSYMHRVGRTARAGQSGLALSFVVPRENWGKDKAVSIKSAEKDEKVFERIKERVKKESDSEIKEWDWKGRKGEIEGFRYRMEDALKAVTGKRVAEARREEVRRELLNSEKLKSHFAANPLDLSYLRHDAPLHPARQQTHLKHVPNYLMPKIAALPTGGDVTDHAGVGFSRRGRGGHRGRGGRGSKSGRGKKVDPLKFK

Annotated regions:
phrase: LLSQHYTHTSERDKFLLIYVLLKLKLIRGKSIIFVNDVERGYRVKLFLEQFGVKCCVVNSELPLASRYHVVEEFNRGVYDVVVATDEGAGADAEEEEDVKQEESESEGEEDEDDDKEAEDKEKEAKEEAKPAPGPSKRRATSPPSKPNKRARRADPTSSLARGIDFTSASSVINFDLPLTSTSYMHRVGRTARAGQSGLALSFVVPRENWGKDKAVSIKSAEKDEKVFERIKERVKKE
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: YRVKLFLEQFGVKCCVVNSELPLASRYHVVEEFNRGVYDVVVATDEGAGADAEEEEDVKQEESESEGEEDEDDDKEAEDKEKEAKEEAKPAPGPSKRRATSPPSKPNKRARRADPTSSLARGIDFTSASSVINFDLPLTSTSYMHRVGRTARA
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: KFAHPTLVQAKAIPLLLEGKDVLARARTGSGKTAAYIVPAVQKILEAKADLSPASAEYQATRAIILVPTKELALQVSSFTKNVTKYCDGLVQCVDVAAGGASIQRVLLNDKPDIVISTPTKLLSLLQSKSLSLSQLSFLAIDEADLLLSYGFKDDLTRIMDPTSGWIPKLGVQGCLMSATLSDDVEGIKGLVLRNPAILTLSEPASASSLLSQ
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: TSSLARGIDFTSASSVINFDLPLTSTSYMHRVGRTARA
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: IYVLLKLKLIRGKSIIFVNDVERGYRVKLFLEQFGVKCCVVNSELPLASRYHVVEEFNRGVYDVVVATD
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: IPLLLEGKDVLARARTGSGKTAAYIVPAVQKILEAKADLSPASAEYQATRAIILVPTKELALQVSSFTKNVTKYCDGLVQCVDVAAGGASIQRVLLNDKPDIVISTPTKLLSLLQSKSLSLSQLSFLAIDEADLLLSYGFKDDLTRIMDPTSGWIPKLGVQGCLMSATLSDDVEGIKGLVLRNPAI
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: LVQAKAIPLLLEGKDVLARARTGSGKTAAYIVPAVQKILEAKADLSPASAEYQATRAIILVPTKELALQVSSFTKNVTKYCDGLVQCVDVAAGGASIQRVLLNDKPDIVISTPTKLLSLLQSKSLSLSQLSFLAIDEADLLLSYGFKDDLTRIMDPTSGWIPKLGVQGCLMSATLSDDV
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain
Protein sequence:
MTDLTLKALAAERQVSVDRLVQQFADAGIRKSADDSVSAQEKQTLLAHLNREAVSGPDKLTLQRKTRSTLNIPGTGGKSKSVQIEVRKKRTFVKRDPQEAERLAAEEQAQREAEEQARREAEEQAKREAQQKAEREAAEQAKREAAEKAKREAAEKDKVSNQQTDDMTKTAQAEKARRENEAAELKRKAEEEARRKLEEEARRVAEEARRMAEENKWTATPEPVEDTSDYHVTTSQHARQAEDENDREVEGGRGRGRNAKAARPAKKGKHAESKADREEARAAVRGGKGGKRKGSSLQQGFQKPAQAVNRDVVIGETITVGELANKMAVKGSQVIKAMMKLGAMATINQVIDQETAQLVAEEMGHKVILRRENELEEAVMSDRDTGAAAEPRAPVVTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETDNGMITFLDTPGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAGVPVVVAVNKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDELLDAILLQAEVLELKAVRKGMASGAVIESFLDKGRGPVATVLVREGTLHKGDIVLCGFEYGRVRAMRNELGQEVLEAGPSIPVEILGLSGVPAAGDEVTVVRDEKKAREVALYRQGKFREVKLARQQKSKLENMFVNMTEGEVHEVNIVLKADVQGSVEAISDSLLKLSTDEVKVKIIGSGVGGITETDATLAAASNAILVGFNVRADASARKVIESESLDLRYYSVIYNLIDEVKAAMSGMLSPELKQQIIGLAEVRDVFKSPKFGAIAGCMVTEGTIKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVKNYNDVRVGDMIEVFEIIEIQRTIA

Annotated regions:
phrase: PDKLTLQRKTRSTLNIPGTGGKSKSVQIEVRKKRTFVK
type: DOMAIN
name: IF2_assoc_dom_bac
description: Initiation factor 2 associated domain, bacterial

phrase: KLARQQKSKLENMFVNMTEGEVHEVNIVLKADVQGSVEAISDSLLKLSTDEVKVKIIGSGVGGITETDATLAAASNAILVGFNVRADASARKVIESESLDLRYYSVIYNLIDEV
type: DOMAIN
name: TIF_IF2_dom3
description: Translation initiation factor IF- 2, domain 3

phrase: ASGAVIESFLDKGRGPVATVLVREGTLHKGDIVLCGFEYGRVRAMRNELGQEVLEAGPSIPVEILGLSGVPAAGDEVTVVRDEKKAREVALYR
type: DOMAIN
name: IF2_II
description: Translation initiation factor IF-2, domain II

phrase: VVTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETDNGMITFLDTPGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAGVPVVVAVNKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDELLDA
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: GAIAGCMVTEGTIKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVKNYNDVRVGDM
type: DOMAIN
name: EFTu-like_2
description: Translation elongation factor EFTu-like, domain 2

phrase: MTDLTLKALAAERQVSVDRLVQQFADAGIRKSADDSVSAQEKQTLLAHLNR
type: DOMAIN
name: IF2_N
description: Translation initiation factor IF-2, N-terminal

phrase: ETITVGELANKMAVKGSQVIKAMMKLGAMATINQVIDQETAQLVAEEMGH
type: DOMAIN
name: IF2_N
description: Translation initiation factor IF-2, N-terminal

phrase: PRAPVVTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETDNGMITFLDTPGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAGVPVVVAVNKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDELLDAILLQAEVLEL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: ASGAVIESFLDKGRGPVATVLVREGTLHKGDIVLCGFEYGRVRAMRNELGQEVLEAGPSIPVEILGLSGVPAAGDEVTV
type: DOMAIN
name: EF-G-like_DII
description: Elongation factor G-like, domain II

phrase: VVTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETDNGMITFLDTPGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAGVPVVVAVNKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDELLDAI
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain
Protein sequence:
MSETFAKRASRRGYDPRAIEERWQRRWAETGLYKTDEDPSKPKHYALTMLPYPSGDLHVGHWYAMTPSDTRARFMRMRGYRVFFPIGFDAFGLPAENAAIKRGIHPRDWTYSNIERMRGQLRQMGTMFDFDAEVVTCDPEYYRWNQWFFLKFYEKGLAYREKAPVDWCPSCNTTLAREQVVGPDRRCERCDTPVIKRNLAQWLFKITDYAEELLDFSEIEWPERVKALQRNWIGRSEGAEIEFEIEGYGGVTVFTTRPDTLFGATFFVVAPEHPAVESITTPERGEEVRAYVERAARMSEIDRADVTREKTGVFTGAYAVNPANGERIPVYVADYVLMGYGTGAIMAVPAHDERDFEFAKKHGIEIRTVIAPPDWDGSPLERAYVGEGQMVNSGPFDGTPSAEGREKVTGWLRERGVGRPAVNYRLRDWLISRQRYWGTPIPIVYCERCGTVPVPEEDLPVLLPEDAEFMPTGESPLKFNDEFRKTECPRCGGPAERETDTMDTFVDSSWYQYRYLSPHYEEGPFDPERGSRWLPVDQYTGGIEHATMHLLYTRFFTKVMRDLGLVDFDEPMLRLFNQGVILGPDGNRMSKSRGNVVNPQEYVDRYGSDVLRCYLMFIGPWDEGGPWDPGGIEGVARWLRRAFTLVAGGDVSEAEADPGELSRRTHRLVKRVTEYLEGFRFNTAIAALMEHTNYLLAVKGEVGEEEWREAMRSFLLVLAPFAPHHAEEMWEILGEEYSVHEQGWPSWDEELVREETVTLVVQVNGKLRDRVEAPAGVDEGRARELALSSERVRAHVEGRELRKTVYVPGRLINLVVS

Annotated regions:
phrase: LSRRTHRLVKRVTEYLEGFRFNTAIAALMEHTNYLLAVKGEVGEEEWREAMRSFLLVLAPFAPHHAEEMWEILGEEYSVHEQGWPSWDEELVREETVTLVVQVNGKLRDRVEAP
type: DOMAIN
name: M/V/L/I-tRNA-synth_anticd-bd
description: Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding

phrase: RNWIGRSEGAEIEFEIEGYGGVTVFTTRPDTLFGATFFVVAPEHPAVESITTPERGEEVRAYVERAARMSEIDRADVTREKTGVFTGAYAVNPANGERIPVYVADYVLMGYGTGAIMAVPAHDERDFEFAKKHGIEIRTVIAPPDWDGSPLERAYVGEGQMVNSGPFDGTPSAEGREKVTGW
type: DOMAIN
name: Leu_tRNA-synth_edit
description: Leucyl-tRNA synthetase, editing domain

phrase: WQRRWAETGLYKTDEDPSKPKHYALTMLPYPSGDLHVGHWYAMTPSDTRARFMRMRGYRVFFPIGFDAFGLPAENAAIKRGIHPRDWTYSNIERMRGQLRQMGTMFDFDAEVVTCDPEYYRWNQWFFLKFYEKGLAYREKAPVDWCPSCNTTLAREQVVGPDRRCERCDTPVIKRNLAQWLFKITDYAEELLDFSEIEW
type: DOMAIN
name: aa-tRNA-synth_Ia
description: Aminoacyl-tRNA synthetase, class Ia

phrase: LRDWLISRQRYWGTPIPIVYCERCGTVPVPEEDLPVLLPEDAEFMPTGESPLKFNDEFRKTECPRCGGPAERETDTMDTFVDSSWYQYRYLSPHYEEGPFDPERGSRWLPVDQYTGGIEHATMHLLYTRFFTKVMRDLGLVDFDEPMLRLFNQGVILGPDGNRMSKSRGNVVNPQEYVDRYGSDVLRCYL
type: DOMAIN
name: aa-tRNA-synth_Ia
description: Aminoacyl-tRNA synthetase, class Ia
Protein sequence:
MLLPKRVKWRRVQRGRLKGKSKGGNSVAFGEYGLQALEAAWITSRQIEAARIAMTRYIKRGGKVWIKIFPDKPITAKPAETRMGSGKGSPEYWVAVVKPGRIMFELAGVPEDTAKEAMRLAMHKLPIKCKFVKREEVGGEANES

Annotated regions:
phrase: RMGSGKGSPEY
type: CONSERVED_SITE
name: Ribosomal_uL16_CS
description: Large ribosomal subunit protein uL16, conserved site

phrase: GNSVAFGEYGLQALEAAWITSRQIEAARIAMTRYIKRGGKVWIKIFPDKPITAKPAETRMGSGKGSPEYWVAVVKPGRIMFELAGVPEDTAKEAMRLAMHKLPIKCKF
type: DOMAIN
name: Ribosomal_uL16_dom
description: Large ribosomal subunit protein uL16 domain

phrase: KRGGKVWIKIF
type: CONSERVED_SITE
name: Ribosomal_uL16_CS
description: Large ribosomal subunit protein uL16, conserved site
Protein sequence:
MIAPQPIPRTLPRWQRIVALTMIGISTALIGGCTMGQNPDKSPHLTGEQKIQLIDSMRHKGSYEAARERLTATAQIIADRVSAAIPGQTWKFNDDSYGQDFYRNGSLCKELSADIARRPMAKPVDFGSTFSAEDFKIAANIVREEAAKYGVTTESSLFNESAKRDYDVQGNGYEFNLGQIKFATLNITGDCFLLQKVLDLPAGQLPPEPPIWPTTSTPTP

Annotated regions:
Protein sequence:
MDIIMICIAIKGPTLIDARKQLEEALPFADLVELRLDGFTNLDIDGLRNLRLAFPIPMIFTLRSHQQGGSYSQSEERRLADIRLLAELKPEYFDLENDVPPVFINEMSTFHPEIKMILSYHNFNEIPHDHDDIFHKMQKSPAHYYKIAVTPSNCIETLKFIAWAKKSNHLIGICMGAHGQICRILGPIIGCPITYAAIDENQQTAPGQLSAKTLIEKYHHSTLRPNSAVYGLIGDPVDKSISDDTHNILISEWKFDAVYVKILVKANEVEEFLQLAKQLPFAGLSVTMPLKELILPYLDKIDPHALKIGAVNTLVFKNSKIFGYNTDGLGALNAIENATPVNGKQMVIIGAGGATKAIAYEALQRGAKVTILNRHADKAAKVAAQLGCKSKALDEMAECAKVGYDILINCTPVEMPISANDILPPAFVMDIKTKPKDSELLKQAKEKGCHIIYGHQMFVEQAVGQFHLWFKDQIDVNKCRAFLNTQAEKCLSKH

Annotated regions:
phrase: DLENDVPPVFINEMSTFHPEIKMILSYH
type: ACTIVE_SITE
name: 3-dehydroquinate_DH_AS
description: 3-dehydroquinate dehydratase, active site

phrase: LIGDPVDKSISDDTHNILISEWKFDAVYVKILVKANEVEEFLQLAKQLPFAGLSVTMPLKELILPYLDKIDPHALKIGAVNT
type: DOMAIN
name: Shikimate_DH-bd_N
description: Shikimate dehydrogenase substrate binding, N-terminal

phrase: PVNGKQMVIIGAGGATKAIAYEALQRGAKVTILNRHADKAAKVAAQLGCKSKALDEMAECAKVGYDILINCTPVEMPISAN
type: DOMAIN
name: Shikm_DH/Glu-tRNA_Rdtase
description: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase
Protein sequence:
MTARLIDGRQVAQQVHEEVRQAVERHTAQGRRAPGLAVVLVGENPASQVYVRNKRRTCEALGIESRSHDLPADTPQSVLLDLIDALNADPAVDGILVQLPLPAHFDTETVIERIDPAKDVDGFHPYNVGRLAVRLPTLRPCTPYGVMRLLDSTGEVYKGRNAVVVGASNIVGRPMALELMLAGATVTVCHRFTTDTAEHVARADIVVVAVGRPDLVPGEWIKPGATVIDVGMNRLEDGRLVGDVSFAAAAERAAWITPVPGGVGPMTVAMLMKNTIQSYESRLGR

Annotated regions:
phrase: PAKDVDGFHPYNVGRLAVRLPTLRPCTPYGVMRLLDSTGEVYKGRNAVVVGASNIVGRPMALELMLAGATVTVCHRFTTDTAEHVARADIVVVAVGRPDLVPGEWIKPGATVIDVGMNRLEDGRLVGDVSFAAAAERAAWITPVPGGVGPMTVAMLMKNTIQSY
type: DOMAIN
name: THF_DH/CycHdrlase_NAD-bd_dom
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain

phrase: IDGRQVAQQVHEEVRQAVERHTAQGRRAPGLAVVLVGENPASQVYVRNKRRTCEALGIESRSHDLPADTPQSVLLDLIDALNADPAVDGILVQLPLPAHFDTETVIERIDPAKDV
type: DOMAIN
name: THF_DH/CycHdrlase_cat_dom
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain

phrase: HPYNVGRLAVRLPTLRPCTPYGVMRLLDSTGEVYKGRNAVVVGASNIVGRPMALELMLAGATVTVCHRFTTDTAEHVARADIVVVAVGRPDLVPGEWIKPGATVIDVGMNRLEDGRLVGDVSFAAAAERAAWITPVPGGVGPMTVAMLMKNTIQSYE
type: DOMAIN
name: THF_DH/CycHdrlase_NAD-bd_dom
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain

phrase: PGGVGPMT
type: CONSERVED_SITE
name: THF_DH/CycHdrlase_CS
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site
Protein sequence:
MGGKWSKSRAAEWPAVRERIRQTPAAXXXXXAASRDLDKHGALTSSNTSSTNPDCAWLEAQEESEVGFPVRPQVPLRPMTYKGAFDLGFFLKEKGGLDGLIYSKKRQEILDLWVYNTQGYFPDWQNYTPGPGIRYPLTFGWCYKLVPVDPREVEEDNKGENNCLLHPISQHGMEDEEREVLQWKFDSSLARRHIARELHPEYYKDC

Annotated regions:
Protein sequence:
MKILIATGNRDKLQEIAQIFSDHEVMGYHEIMEPFEIIEDGESFQANAIIKAKAIHERLSAQDRARYLILSDDSGISVPLLHGEPGIYSARYAGEPLSSKRNLQKLIEEIQKRGAERTPAHYTAAMAMILEGRIYTVHGWMHGEAIIAPRGERGFGYDPMFIPQGENRTLGEMEESEKNAISHRAKALKLARKLLQSLTKTEG

Annotated regions:
Protein sequence:
MSKYIFVTGGVASSVGKGISVASLGRLLKNRGISVSIMKLDPYINVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTDEPANQANNVTTGQVYAAVIGKERRGEYLGGTIQVIPHITNEIKERIQAVARRSDADVVIVEVGGTVGDIEGEPFLEAIRQMRKDVGRSNVLYLHVTLLPYIGATKELKTKPTQHSVKELLRVGIQPDVILCRSDYPMSDDLREKIALFCNIEAQAVVPMLTAETIYEVPLILEEAGLGEYVVQELGLPWREPHMQEWRELVTRIKRPRPELTIGLVGKYVELHDAYLSVVEALRHAGWYHDVDIHVKWINSEALDNMGERYTEVLEGLDGIVVPGGFGHRGIEGKIKAAGYARRMNIPYLGLCLGMQVAVIEFARHVLGLSEANSTEFDPQTPYPVIDLMNTQRQVAEKGGTMRLGNWVCCLTPGTKAHQAYGEAIVFERHRHRYEFNNDFRKRMEAHGMVISGRSADNNLVEIIELANHPWFVGTQLHPELKSRPNRPHTLLRDFIGTCVQLSEERQHAVDAAFDREASVGASMAVNQPDSSFEPH

Annotated regions:
phrase: KYIFVTGGVASSVGKGISVASLGRLLKNRGISVSIMKLDPYINVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTDEPANQANNVTTGQVYAAVIGKERRGEYLGGTIQVIPHITNEIKERIQAVARRSDADVVIVEVGGTVGDIEGEPFLEAIRQMRKDVGRSNVLYLHVTLLPYIGATKELKTKPTQHSVKELLRVGIQPDVILCRSDYPMSDDLREKIALFCNIEAQAVVPMLTAETIYEVPLILEEAGLGEYVVQELG
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: KYIFVTGGVASSVGKGISVASLGRLLKNRGISVSIMKLDPYINVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTDEPANQANNVTTGQVYAAVIGKERRGEYLGGTIQVIPHITNEIKERIQAVARRSDADVVIVEVGGTVGDIEGEPFLEAIRQMRKDVGRSNVLYLHVTLLPYIGATKELKTKPTQHSVKELLRVGIQPDVILCRSDYPMSDDLREKIALFCNIEAQAVVPMLTAETIYEVPLILEEAGLGEYV
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: LHDAYLSVVEALRHAGWYHDVDIHVKWINSEALDNMGERYTEVLEGLDGIVVPGGFGHRGIEGKIKAAGYARRMNIPYLGLCLGMQVAVIEFARHVLGLSEANSTEFDPQTPYPVIDLMNTQRQVAEKGGTMRLGNWVCCLTPGTKAHQAYGEAIVFERHRHRYEFNNDFRKRMEAHGMVISGRSADNNLVEIIELANHPWFVGTQLHPELKSRPNRPHTLLRDF
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: LTIGLVGKYVELHDAYLSVVEALRHAGWYHDVDIHVKWINSEALDNMGERYTEVLEGLDGIVVPGGFGHRGIEGKIKAAGYARRMNIPYLGLCLGMQVAVIEFARHVLGLSEANSTEFDPQTPYPVIDLMNTQRQVAEKGGTMRLGNWVCCLTPGTKAHQAYGEAIVFERHRHRYEFNNDFRKRMEAHGMVISGRSADNNLVEIIELANHPWFVGTQLHPELKSRPNRPHTLLRDF
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain
Protein sequence:
MLDIKRIRNNLDEIKAAMARRGEKDFDLDAVVALDEKRRELLQQVELMKNEQNTVSKEVPKLKKEGKDATEVMARMKELSGKIKELDGQVKEVEDQLEYTLLRIPNVPHPDVPQGETDDDNIEVRKWSEPTHFDFEPKAHWDIATDLGIIDFEAASKITGARFALYKGVGARLERALINFMLDLHIEEHGYTEVLPPFMVNRSSMTGTGQLPKFEEDAFKLPQKDYFLVPTAEVPVTNMHRDEIIEGANLPLSYVAYTPCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYAELEKLTNNAEKVLQLLEIPYRIVRICTGDLGFTAAFKYDIEVWMPSYNRYVEISSCSNFEDFQARRANIRYRPEEKGKVEFLHTLNGSGLAVGRTVAAILENCQDDEGNVKIPEALIPYMRGIKVITK

Annotated regions:
phrase: RLERALINFMLDLHIEEHGYTEVLPPFMVNRSSMTGTGQLPKFEEDAFKLPQKDYFLVPTAEVPVTNMHRDEIIEGANLPLSYVAYTPCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYAELEKLTNNAEKVLQLLEIPYRIVRICTGDLGFTAAFKYDIEVWMPSYNRYVEISSCSNFEDFQARRANIRYRPEEKGKVEFLHTLNGSGLAVGRTVAAILENCQDDEGNVKIPEALI
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: DNIEVRKWSEPTHFDFEPKAHWDIATDLGIIDFEAASKITGARFALYKGVGARLERALINFMLDLHIEEHGYTEVLPPFMVNRSSMTGTGQLPKFEEDAFKLPQKDYFLVPTAEVPVTNMHRDEIIEGANLPLSYVAYTPCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYAELEKLTNNAEKVLQLLEIPYRIVRICTGDLGFTAAFKYDIEVWMPSYNRYVEISSCSNFEDFQARRANIRYRPEEKGKVEFLHTLNGSGLAVGRTVAAILENCQDDEGNVKIPEALIPY
type: DOMAIN
name: SerRS_core
description: Serine-tRNA ligase catalytic core domain

phrase: QKDYFLVPTAEVPVTNMHRDEIIEGANLPLSYVAYTPCFRSEAGSAGRDTRGLIRQHQFNKVELVKFVKPEDSYAELEKLTNNAEKVLQLLEIPYRIVRICTGDLGFTAAFKYDIEVWMPSYNRYVEISSCSNFEDFQARRANIRYRPEEKGKVEFLHTLNGSGLAVGRTVAAILE
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: MLDIKRIRNNLDEIKAAMARRGEKDFDLDAVVALDEKRRELLQQVELMKNEQNTVSKEVPKLKKEGKDATEVMARMKELSGKIKELDGQVKEVEDQLEYTLLRIPNV
type: DOMAIN
name: Ser-tRNA-synth_1_N
description: Serine-tRNA synthetase, type1, N-terminal
Protein sequence:
MTRLVTPDITEDDLIESSLRPRALDDYIGQEKAKGNLRVFIDAARKRGEALDHVLLYGPPGLGKTTLANIIACEMGVNIKSTSGPVIERPGDLAAILTNLEPHDVLFIDEIHRLSHVVEEILYPAMEDYQLDIIIGQGPSARTIKLDLPKFTLVGATTRAGLLSSPLRDRFGVISRLEFYTDDELTTIVTRSARILNIGIEPEGGRELARRSRGTPRIANRLLRRVRDFAQVRADGVITAPVVDESLKLLEIDEKGFDHMDRTIMLTIIDKFGGGPVGLDTIAAAIGEERDTIEDVYEPFLIQHGFINRTPRGRVATRAAYEHFGRIAPPSSSQGNLF

Annotated regions:
phrase: LRPRALDDYIGQEKAKGNLRVFIDAARKRGEALDHVLLYGPPGLGKTTLANIIACEMGVNIKSTSGPVIERPGDLAAILTNLEPHDVLFIDEIHRLSHVVEEILYPAMEDYQLDIIIGQGPSARTIKLDLPKFTLVGATTRAGLLSSPLRDRFGVISR
type: DOMAIN
name: RuvB-like_N
description: RuvB-like P-loop domain

phrase: EKGFDHMDRTIMLTIIDKFGGGPVGLDTIAAAIGEERDTIEDVYEPFLIQHGFINRTPRGRVATRAAYEH
type: DOMAIN
name: RuvB_C
description: RuvB C-terminal winged helix domain

phrase: YTDDELTTIVTRSARILNIGIEPEGGRELARRSRGTPRIANRLLRRVRDFAQVRADGVITAPVVDESLKLLEI
type: DOMAIN
name: AAA_lid_4
description: RuvB, AAA lid domain

phrase: ALDHVLLYGPPGLGKTTLANIIACEMGVNIKSTSGPVIERPGDLAAILTNLEPHDVLFIDEIHRLSHVVEEILYPAMEDYQLDIIIGQGPSARTIKLDLPKFTLVGATTRAGLLSSPLRDRFGVISRLEFY
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain
Protein sequence:
MKAYAKKRISYMPSSPSQNVINFEEIETQKENILPLKEGRSAAALSKAIHQPLVEINQVKSSFEQRLIDELPALSDPITLYLEYIKWLNNAYPQGGNSKQSGMLTLLERCLSHLKDLERYRNDVRFLKIWFWYIELFTRNSFMESRDIFMYMLRNGIGSELASFYEEFTNLLIQKEKFQYAVKILQLGIKNKARPNKVLEDRLNHLLRELGENNIQLGNEISMDSLESTVLGKTRSEFVNRLELANQNGTSSDVNLTKNNVFVDGEESDVELFETPNRGVYRDGWENFDLKAERNKENNLRISLLEANTNLGELKQHEMLSQKKRPYDEKLPIFRDSIGRSDPVYQMINTKDQKPEKIDCNFKLIYCEDEESKGGRLEFSLEEVLAISRNVYKRVRTNRKHPREANLGQEESANQKEAEAQSKRPKISRKALVSKSLTPSNQGRMFSGEEYINCPMTPKGRSTETSDIISAVKPRQLTPILEMRESNSFSQSKNSEIISDDDKSSSSFISYPPQR

Annotated regions:
phrase: KSSFEQRLIDELPALSDPITLYLEYIKWLNNAYPQGGNSKQSGMLTLLERCLSHLKDLERYRNDVRFLKIWFWYIELFTRNSFMESRDIFMYMLRNGIGSELASFYEEFTNLLIQKEKFQYAVKILQLG
type: DOMAIN
name: Mad3/Bub1_I
description: Mad3/Bub1 homology region 1

phrase: KLPIFRDSIGRSDPVYQMINTKDQKPEKIDCNFKLIYCEDEESKGGRLEFSLEEVLAISRNVYKRVRT
type: DOMAIN
name: Mad3/Bub1_II
description: Mad3/Bub1 homology region 2

phrase: LIDELPALSDPITLYLEYIKWLNNAYPQGGNSKQSGMLTLLERCLSHLKDLERYRNDVRFLKIWFWYIELFTRNSFMESRDIFMYMLRNGIGSELASFYEEFTNLLIQKEKFQYAVKILQLGIKNKARPNKVLEDRLNHLLRELGENNIQLGNEISMDSLE
type: DOMAIN
name: Mad3/Bub1_I
description: Mad3/Bub1 homology region 1

phrase: INQVKSSFEQRLIDELPALSDPITLYLEYIKWLNNAYPQGGNSKQSGMLTLLERCLSHLKDLERYRNDVRFLKIWFWYIELFTRNSFMESRDIFMYMLRNGIGSELASFYEEFTNLLIQKEKFQYAVKILQLG
type: DOMAIN
name: Mad3/Bub1_I
description: Mad3/Bub1 homology region 1
Protein sequence:
MNIFTEFHARIAAILRGIIGSGRLPEDLDLTRFVVEPPREAAHGDLAANAAMVYAKEAKPAFANPRQLAVEIAVALAEDGDVAEAEVAGPGFINIRLKPEFFGRLLGAALEQGSDFGRPATAAQEKINVEYVSANPTGPMHVGHGRGAVFGDALANLLAFAGFGVTREYYINDAGAQVDVLARSAHLRYREALGETIGAIPEGLYPGDYLKSVGASLAQAHGDTYRGSNGEEWLEIFRLAAIDGMMAMIRDDLAALNITHEVFFSERSLTRSEDGDQVAAAIAFLRDRGLVYEGRLPPPKGQAIEDWEDREQVLFKSTDFGDDVDRPLKKSDGTYTYFASDIAYHKTKIDRGYSVLIDVWGADHGGYVKRMAAAVKALSEGRVTLDVKLCQLVKLMRGGEPVKMSKRAGDFVTLREVVDEVGVDAVRFMMLFRKNDAVLEFDLAKVIEQSKDNPVFYVQYAHARVKSVFRQAATLLPDLDCSLAALKTADFSLLGDEGEARLIKIIAQFPRVVEGAALAHEPHRIAFYLHDLASELHAHWTRGKDQPHLRFIYEERRDLTLARLALVHIMAEVLASGLSLLGVSAPSEMR

Annotated regions:
phrase: PTGPMHVGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: VQYAHARVKSVFRQAATLLPDLDCSLAALKTADFSLLGDEGEARLIKIIAQFPRVVEGAALAHEPHRIAFYLHDLASELHAHWTRGKDQPHLRFIYEERRDLTLARLALVHIMAEVLASGLSLLGVSAPSE
type: DOMAIN
name: DALR_anticod-bd
description: DALR anticodon binding

phrase: DREQVLFKSTDFGDDVDRPLKKSDGTYTYFASDIAYHKTKIDRGYSVLIDVWGADHGGYVKRMAAAVKALSEGRVTLDVKLCQLVKLMRGGEPVKMSKRAGDFVTLREVVDEVGVDAVRFMMLFRKNDAVLEF
type: DOMAIN
name: ArgRS_core
description: Arginyl-tRNA synthetase, catalytic core domain

phrase: ALEQGSDFGRPATAAQEKINVEYVSANPTGPMHVGHGRGAVFGDALANLLAFAGFGVTREYYINDAGAQVDVLA
type: DOMAIN
name: ArgRS_core
description: Arginyl-tRNA synthetase, catalytic core domain

phrase: HARIAAILRGIIGSGRLPEDLDLTRFVVEPPREAAHGDLAANAAMVYAKEAKPAFANPRQLAVEIAVALAEDGDVAEAEVAGPGFINIR
type: DOMAIN
name: Arg-tRNA-synth_N
description: Arginyl tRNA synthetase N-terminal domain

phrase: VQYAHARVKSVFRQAATLLPDLDCSLAALKTADFSLLGDEGEARLIKIIAQFPRVVEGAALAHEPHRIAFYLHDLASELHAHWTRGKDQPHLRFIYEERRDLTLARLALVHIMAEVLASGLSLLGVSAPSE
type: DOMAIN
name: DALR_anticod-bd
description: DALR anticodon binding

phrase: TEFHARIAAILRGIIGSGRLPEDLDLTRFVVEPPREAAHGDLAANAAMVYAKEAKPAFANPRQLAVEIAVALAEDGDVAEAEVAGPGFINIR
type: DOMAIN
name: Arg-tRNA-synth_N
description: Arginyl tRNA synthetase N-terminal domain

phrase: KINVEYVSANPTGPMHVGHGRGAVFGDALANLLAFAGFGVTREYYINDAGAQVDVLARSAHLRYREALGETIGAIPEGLYPGDYLKSVGASLAQAHGDTYRGSNGEEWLEIFRLAAIDGMMAMIRDDLAALNITHEVFFSERSLTRSEDGDQVAAAIAFLRDRGLVYEGRLPPPKGQAIEDWEDREQVLFKSTDFGDDVDRPLKKSDGTYTYFASDIAYHKTKIDRGYSVLIDVWGADHGGYVKRMAAAVKALSEGRVTLDVKLCQLVKLMRGGEPVKMSKRA
type: DOMAIN
name: ArgRS_core
description: Arginyl-tRNA synthetase, catalytic core domain
Protein sequence:
MNHLMFYCRPGFEKDMAAEIQDKAVALECFGFSRVADNCGFVLFECYGEQDAERLARRLPFRELIFARQMLVVIEQLNGLDLKDRITPIVEAVQKMPQFGELRVETADTNEAKELSTFCRKFSVPLRQALRAAGKLTPDVDPRRPVLHLFFLKNDSVWIGYSYPNNNSPFHMGIPRLRFPSDAPSRSTLKLEEAFYMFIPPEDDEIRLCSGLTAVDLGASPGGWTYQLVRRGMMVSAIDNGPMAESLMESGQVKHIMADGFTYRPTKKNPYWLVCDMVEKPARITHLIAQWFREGCCQEAIFNLKLPMKKRYAEVEHNLAVLKEWLAEIDGEYVIQAKQLYHDREEITVHVYDERKLARRRSGAFN

Annotated regions:
phrase: MNHLMFYCRPGFEKDMAAEIQDKAVALECFGFSRVADNCGFVLFECYGEQDAERLARRLPFRELIFARQM
type: DOMAIN
name: RlmM_FDX
description: RlmM ferredoxin-like domain

phrase: SRSTLKLEEAFYMFIPPEDDEIRLCSGLTAVDLGASPGGWTYQLVRRGMMVSAIDNGPMAESLMESGQVKHIMADGFTYRPTKKNPYWLVCDM
type: DOMAIN
name: RNA_MeTrfase_FtsJ_dom
description: Ribosomal RNA methyltransferase, FtsJ domain

phrase: DRITPIVEAVQKMPQFGELRVETADTNEAKELSTFCRKFSVPLRQALRAAGKLTPDVDPRRPVLHLFFLKNDSVWIGYS
type: DOMAIN
name: RlmM_THUMP-like
description: Ribosomal RNA large subunit methyltransferase M, THUMP-like domain
Protein sequence:
MKKISLTLLILLLALTAAACGSKNESTASKASGTASEKKKIEYLDKTYEVTVPTDKIAITGSVESMEDAKLLDVHPQGAISFSGKFPDMFKDITDKAEPTGEKMEPNIEKILEMKPDVILASTKFPEKTLQKISTAGTTIPVSHISSNWKENMMLLAQLTGKEKKAKKIIADYEQDLKEIKTKINDKAKDSKALVIRIRQGNIYIYPEQVYFNSTLYGDLGLKAPNEVKAAKAQELSSLEKLSEMNPDHIFVQFSDDENADKPDALKDLEKNPIWKSLKAVKEDHVYVNSVDPLAQGGTAWSKVRFLKAAAEKLTQN

Annotated regions:
phrase: PTGEKMEPNIEKILEMKPDVILASTKFPEKTLQKISTAGTTIPVSHISSNWKENMMLLAQLTGKEKKAKKIIADYEQDLKEIKTKINDKAKDSKALVIRIRQGNIYIYPEQVYFNSTLYGDLGLKAPNEVKAAKAQELSSLEKLSEMNPDHIFVQFSDDENADKPDALKDLEKNPIWKSLKAVKEDHVY
type: DOMAIN
name: ABC_transptr_periplasmic_BD
description: ABC transporter periplasmic binding domain

phrase: IAITGSVESMEDAKLLDVHPQGAISFSGKFPDMFKDITDKAEPTGEKMEPNIEKILEMKPDVILASTKFPEKTLQKISTAGTTIPVSHISSNWKENMMLLAQLTGKEKKAKKIIADYEQDLKEIKTKINDKAKDSKALVIRIRQGNIYIYPEQVYFNSTLYGDLGLKAPNEVKAAKAQELSSLEKLSEMNPDHIFVQFSDDENADKPDALKDLEKNPIWKSLKAVKEDHVYVNSVDPLAQGGTAWSKVRFLKAAAEKLTQ
type: DOMAIN
name: ABC_transptr_periplasmic_BD
description: ABC transporter periplasmic binding domain
Protein sequence:
MTKSELIERLAGQQSHISAKTVEDAVKEILDHMAITLADGERIEVRGFGSFSLHYRAPRVGRNPKTGDKVELEGKYVPHFKPGKELRDRVNIYD

Annotated regions:
phrase: GFGSFSLHYRAPRVGRNPK
type: CONSERVED_SITE
name: Histone-like_DNA-bd_CS
description: Histone-like DNA-binding protein, conserved site
Protein sequence:
MSVCPAPRSPVRWLHAFTLCLLLAVLAGCVSVPKPMAGAGEDVFSRVGRFAITVTESDGKQQAVQGGFAWRDDGGSYLLDLTNPLGSTEARVEGRPGMAVLTRANGERLAAEHPDALAEDALGSPVPVTGLRDWLRGRLMAGAAPDGLERDAQGRPTAFEQDGWNARLSRYDAQGPQLLVLQRQEPGRRILVRLVITQP

Annotated regions:
Protein sequence:
MRVRGIQRNCPQWWIWGILGFWMLMICNVWGKLWVTVYYGVPVWKEAKTSLFCASDAKAYDREVHNVWATHACVPTDPNPQELVMGNVTENFNMWKNDMVDQMHEDIISLWDESLKPCVKLTPLCVTLECTTVNRTTVNETSTPAYNASDEIRNCSFNVTTELRDKKHKEYALFYKLDIVSLGNDNSSYRLINCNTSTLTQACPKVSFDPIPIHYCAPAGYAILKCNNETFNGTGPCHNVSTVQCTHGIKPVVSTQLLLNGSIAEKEIIIRSENLTDNAKTIIVQLNKSIEIICTRPNNNTRKSIRIGPGQVFYATNGIIGNIRQAHCNLSEVAWNETLHLVSKKLEEKFPNKTIMFNSSPGGDLEITMHTFNCGGEFFYCNTSQLFNGTYNSASQHNDNSTITLPCKIKQIINMWQEVGRAMYAPPIAGNITCRSNITGILLVRDGGSTNETKEIFRPGGGNMKENWRSELYKYKVVEIKPLGIAPTGAKRRVVEREKRAVGIGAVFLGFLGVAGSTMGAASMALTVQARQVLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQARVLAIERYLQDQQLLGIWGCSGKLICTTDVPWNSSWSNKSLTAIWENMTWMQWEREIDNYTTTIYQLLEESQIQQDKNEKELLALDKWQNLWNWFSISRWLWYIRIFIMIIGGLIGLRIIFAVLSIVNKVRQGYSPLSFQTLTPNPRGPDKLGGIEEEGGEQDRGRSVRLVNGFLSLAWDDLRSLCLFSYHRLRDFILIVT

Annotated regions:
phrase: VQARQVLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQARVLAIERYLQDQQLLGIWGCSGKLICTTDVPWNSSWSNKSLTAIWENMTWMQWEREIDNYTTTIYQLLEESQIQQDKNEKELLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASMALTVQARQVLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQARVLAIERYLQDQQLLGIWGCSGKLICTTDVPWNSSWSNKSLTAIWENMTWMQWEREIDNYTTTIYQLLEESQIQQDKNEKELLALDKWQNLWNWFSISRWLWYIRIFIMIIGGLIGLRIIFAVLSIVNKVRQGYSPLSFQT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKEAKTSLFCASDAKAYDREVHNVWATHACVPTDPNPQELVMGNVTENFNMWKNDMVDQMHEDIISLWDESLKPCVKLTPLCVTLECTTVNRTTVNETSTPAYNASDEIRNCSFNVTTELRDKKHKEYALFYKLDIVSLGNDNSSYRLINCNTSTLTQACPKVSFDPIPIHYCAPAGYAILKCNNETFNGTGPCHNVSTVQCTHGIKPVVSTQLLLNGSIAEKEIIIRSENLTDNAKTIIVQLNKSIEIICTRPNNNTRKSIRIGPGQVFYATNGIIGNIRQAHCNLSEVAWNETLHLVSKKLEEKFPNKTIMFNSSPGGDLEITMHTFNCGGEFFYCNTSQLFNGTYNSASQHNDNSTITLPCKIKQIINMWQEVGRAMYAPPIAGNITCRSNITGILLVRDGGSTNETKEIFRPGGGNMKENWRSELYKYKVVEIKPLGIAPTGAKRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120