nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MNANLRNFALWVIIVLLLLALFTLFQNPGQRTTSQDISFSQLLNEVDQGRVRDVLIQGPEIHGTFTDGRSFQTYAPSDPSLIQRLYGKGVSITARPQQNDVPWFVSLLVSWLPFIALIGVWIFLSRQMQGAGGKALGFGKSRAKLLTEAHGRVTFEDVAGVDEAKQDLQEIVEFLRDPGKFQRLGGRIPRGVLLVGPPGTGKTLLARAIAGEANVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRHRGAGLGGGNDEREQTLNQLLVEMDGFEANEGIILIAATNRPDVLDPALLRPGRFDRQVIVPNPDVVGREQILKVHVRKVPLAPDVNLKTTARGTPGFSGADLMNLVNEAALMAARRNKRMVTQVEFEDAKDKVMMGAERKSLVMTEEEKLLTAYHEGGHAIVALNVQATDPVHKATIIPRGRALGMVMQLPERDKLSMSLLGTVAYGENQDEVFMGYQVARQQNASEETSRRIDGEIKRLVEAGFAEAQRILEEKRGDLEALAKALLEFETLTGDEIKDLLAGKRPSRESVIEPATPRGSAVPPAGKPRPRPETGGLEPQPQA

Annotated regions:
phrase: IILIAATNRPDVLDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: LWVIIVLLLLALFTLFQNPGQRTTSQDISFSQLLNEVDQGRVRDVLIQGPEIHGTFTDGRSFQTYAPSDPSLIQRLYGKGVSITARP
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular

phrase: VMTEEEKLLTAYHEGGHAIVALNVQATDPVHKATIIPRGRALGMVMQLPERDKLS
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: IPRGVLLVGPPGTGKTLLARAIAGEANVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRHRGAGLGGGNDEREQTLNQLLVEMDGFEANEGIILIAATNRPDVLDPALLRPGRFDRQVIVPNP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VLLVGPPGTGKTLLARAIAGEANVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRHRGAGLGGGNDEREQTLNQLLVEMDGFEANEGIILIAATNRPDVLDPALLRPGRFDRQVIV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: DVNLKTTARGTPGFSGADLMNLVNEAALMAARRNKRMVTQVEF
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain
Protein sequence:
MIMDNFDSPFQYNRPEMTVEAIKKSIVYKLIFLIGRSPREASQRDWLNATLHAVRDLVTEGWITTARQTRAEDSRRVYYLSMEFLIGRTLSNAMIAEGIYGLAQEALSELNVDLEEVLEKEVDPGLGNGGLGRLAACFMDSIATLGLPGMGYGIRYEYGMFRQKIENGQQVERPDAWLEKGAPWEFIRPSKRFTVEFGGNIHFEGKKCIWQDTEKVTALAYDQMIPGYQNNSAATLRLWSAHAGEVFNLADFNRGEHLAALEEHSANKNLSRVLYPDDSTWNGRELRLRQEYFLVSASLQDILRRHKRTHNSLENLADKVAIHLNDTHPALAIPELMRILVDDEGFEWKKAWEMTRNIFSYTCHTLMSEALETWPVEMMAKILPRHLQMIFEINDHFLEYVRTYVTTDNDFIRRVSLIEEGYQRKVRMGWLSVVGSHKINGVAEIHSDLMVTSTFADFARIFPERFTNVTNGITPRRWLAVANPQLAALFDKYIGSEWRCDLSQIEKLKPFAQEKAFKEAVADIKFANKVKLAEYVKSELGVELDPHALFDVQVKRIHEYKRQMLNVLHIIARYNEMLTNPEKDWQPRVFILAGKAASAYYAAKQTIHLINDVANVINNDERLKGRLKVVFIPNYSVSLAQLIIPAADISEQISLAGTEASGTSNMKFALNGALTLGTLDGANVEILENVGEDNIFIFGNTVEQVEQLRREGYRSFEYYQNDAQLRTVVDQIIEGKFSPEDPQRYHQLLQGLQYHDYYQAFADFRSYV

Annotated regions:
phrase: EASGTSNMKFAL
type: CONSERVED_SITE
name: Pyridoxal_P_attach_site
description: Phosphorylase pyridoxal-phosphate attachment site
Protein sequence:
MQLTGKKIVLAVTGSIAAYKTPQLVRLLIKEGADVRVITTAMAGAFVSALALATVSKHPVYSSVSDGTSWNNHVEMGLWADAMLIAPCSANTLGKLANGLCDNLVSAVYLSARCPVFIAPAMDEDMWLHESTRYNVQRVRSYGNQIIPVAHGELASGLVGEGRMAEPEEIVKYLAEALSDDNKPLKGTNALVTAGPTFERIDPVRFVGNFSTGKMGIAIAEALADMGAKISLVLGPTHLGTYHANIKVIKVESAAEMYDASIKLFPQCEIAVLAAAVADYKPKEMALEKIKKKEETLDLNLTRTNDILASLGKKKKNNQLLVGFALETTNELENAIAKMKSKNADMMALNSLRDEGAGFGHDTNKLTLLDNKGYNEQLPLMSKKESAQAIVKHILELRHAEKTV

Annotated regions:
phrase: LKGTNALVTAGPTFERIDPVRFVGNFSTGKMGIAIAEALADMGAKISLVLGPTHLGTYHANIKVIKVESAAEMYDASIKLFPQCEIAVLAAAVADYKPKEMALEKIKKKEETLDLNLTRTNDILASLGKKKKNNQLLVGFALETTNELENAIAKMKSKNADMMALNSLRDEGAGFGHDTNKLTL
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal

phrase: KKIVLAVTGSIAAYKTPQLVRLLIKEGADVRVITTAMAGAFVSALALATVSKHPVYSSVSDGTSWNNHVEMGLWADAMLIAPCSANTLGKLANGLCDNLVSAVYLSARCPVFIAPAMDEDMWLHESTRYNVQRVRSYGNQIIPVAHGELASGLVGEGRMAEPEEIVKYLAE
type: DOMAIN
name: Flavoprotein
description: Flavoprotein
Protein sequence:
MQFTILNEPSLDSQRREGDLASENYVFGDIRKEGVRILEDSLRSERNALLAIGAGGAADRVKQHYRKLLDDWEAAIMEIRSNDKYESLCCGFAIEKAEVETEMRNTEELDVYKECLVSECFDKKKRRHIPESSKELLEKAFKVKRFPNSKERERIARECGISPLQVRVWFTNKRARSKSRA

Annotated regions:
phrase: IARECGISPLQVRVWFTNKRARS
type: CONSERVED_SITE
name: Homeobox_CS
description: Homeobox, conserved site

phrase: KKKRRHIPESSKELLEKAFKVKRFPNSKERERIARECGISPLQVRVWFTNKRARS
type: DOMAIN
name: HD
description: Homeodomain

phrase: KKKRRHIPESSKELLEKAFKVKRFPNSKERERIARECGISPLQVRVWFTNKRARS
type: DOMAIN
name: HD
description: Homeodomain

phrase: CFDKKKRRHIPESSKELLEKAFKVKRFPNSKERERIARECGISPLQVRVWFTNKRARSKS
type: DOMAIN
name: HD
description: Homeodomain

phrase: DKKKRRHIPESSKELLEKAFKVKRFPNSKERERIARECGISPLQVRVWFTNKRARSKSR
type: DOMAIN
name: HD
description: Homeodomain
Protein sequence:
MSENVVSTGAVNAVKEVWEKRIKKLNEDLKREKEFQQKLVRIWEERVCLTKLREKVTKEDGRVILKIEKEEWKTLPSSLLKLNQLQEWQLHRIGLLKIPEFIGRFQNLIVLDLSRNTITEIPRGIGLLTRLQELILSYNRIKTVPMELSYCASLEKLELAVNRDISDLPQELSNLLKLTHLDLSMNLFTTIPPAVLNMPALEWLDMGSNRLEQLPDTIERMQNLHTLWLQRNEITCLPETISSMKNLSTLVLSNNKLQDIPVCMEKMTNLRFVNFRDNPLKLEVTLPPSENIEEEEERELFGLQFMHTYIQESRRAGNQVNCSTTSPNSIDADG

Annotated regions:
phrase: LLKLTHLDLSMNLFTTIPPAVL
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: FQNLIVLDLSRNTITEIPRGIG
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: MPALEWLDMGSNRLEQLPDTIE
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: MQNLHTLWLQRNEITCLPETIS
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LTRLQELILSYNRIKTVPMELSY
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: MKNLSTLVLSNNKLQDIPVCMEK
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: SLLKLNQLQEWQLHRIGLLKIPEFIGRFQNLIVLDLSRNTITEIPRGIGLLTRLQELILSYNRIKTVPMELSYCASLEKLELAVNRDISDLPQELSNLLKLTHLDLS
type: DOMAIN
name: LRR_R13L4/SHOC2-like
description: Disease resistance R13L4/SHOC-2-like, LRR domain

phrase: NLSTLVLSNNKLQDIPVCMEK
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: RLQELILSYNRIKTVPMELSY
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: NLIVLDLSRNTITEIPRGIGL
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: NLHTLWLQRNEITCLPETISS
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: NLHTLWLQRNEITCLPETISSMKNLSTLVLSNNKLQDIPVCMEKMTNLRFVNFRDNP
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat
Protein sequence:
MTRQSLWDVSDTDVEDGEIRINVGGFKRRLRSHTLLRFPETRLGRLLLCHSREAILELCDDYDDVQREFYFDRNPELFPYVLHFYHTGKLHVMAELCVFSFSQEIEYWGINEFFIDSCCSYSYHGRKVEPEQEKWDEQSDQESTTSSFDEILAFYNDASKFDGQPLGNFRRQLWLALDNPGYSVLSRVFSVLSILVVLGSIITMCLNSLPDFQIPDSQGNPGEDPRFEIVEHFGIAWFTFELVARFAVAPDFLKFFKNALNLIDLMSIVPFYITLVVNLVVESSPTLANLGRVAQVLRLMRIFRILKLARHSTGLRSLGATLKYSYKEVGLLLLYLSVGISIFSVVAYTIEKEENEGLATIPACWWWATVSMTTVGYGDVVPGTTAGKLTASACILAGILVVVLPITLIFNKFSHFYRRQKQLESAMRSCDFGDGMKEVPSVNLRDYYAHKVKSLMASLTNMSRSSPSELSLDDSLH

Annotated regions:
phrase: GEIRINVGGFKRRLRSHTLLRFPETRLGRLLLCHSREAILELCDDYDDVQREFYFDRNPELFPYVLHFYHTGKLHVMAELCVFSFSQEIEYWGINEFFIDSCCSYSYHG
type: DOMAIN
name: BTB/POZ_dom
description: BTB/POZ domain

phrase: IRINVGGFKRRLRSHTLLRFPETRLGRLLLCHSREAILELCDDYDDVQREFYFDRNPELFPYVLHFYHTGKLHVMAELCVFSFSQEIEYWGINEFFIDS
type: DOMAIN
name: T1-type_BTB
description: Potassium channel tetramerisation-type BTB domain

phrase: RVFSVLSILVVLGSIITMCLNSLPDFQIPDSQGNPGEDPRFEIVEHFGIAWFTFELVARFAVAPDFLKFFKNALNLIDLMSIVPFYITLVVNLVVESSPTLANLGRVAQVLRLMRIFRILKLARHSTGLRSLGATLKYSYKEVGLLLLYLSVGISIFSVVAYTIEKEENEGLATIPACWWWATVSMTTVGYGDVVPGTTAGKLTASACILAGILVVVLPITLIFNKFSHFYRR
type: DOMAIN
name: Ion_trans_dom
description: Ion transport domain
Protein sequence:
MAFIISIIIAYLLGSLSFAVIVAKLMKLPDPRTTGSGNAGATNMLRVGGRQAAFYVLLGDAAKGLIAVLIARFLNVQGVSLAFVGLVAVLGHLFPVYFKFRGGKGVATMMGVLLGLSFWIALFVIATWVIVVSIFRYSSVAALVSAVAAPIYTIIAGRTDYLFPVLIIAILLIWKHWENFQRLRKGTEDKVKL

Annotated regions:
Protein sequence:
MLAKRIIPCLDVKEGRVVKGVNFIGLQDVGDPVEIAEAYNVAGADEIVFLDITATHEGRKTIIDVVEKTAAKVFIPLTVGGGISSVKDMYNLLRAGADKVSINSAAVRNPKLIEEGAEHFGSQCIVVAIDARKVAEDKWNVYVNGGRVDTGMDAIEWANRVVKLGAGEILLTSMDADGTKSGYDLRLTEEISKSVSIPVIASGGCGHTDHIIEVFQKTTVDAALAASIFHYGEATVHSVKRKLRDANIEVRL

Annotated regions:
Protein sequence:
MDTFRKWLNKPKADDKSLLARFYHADRSLTAVASELDSFDGRAEPDRCTRLVSRLRQNQDKVLAITNLIMEELLGEERDPRAFRAKFPEEVLQENLAGQLWFGAECLAAGSSILNRESESKEMRPLAQAVTKSLSNVRVLLRDQCLRNNVPNSKTLHLDFNDSTTEQLYESLKIFDHLFAEFELSYVSAMVQVKSRHEYEMQQWIGVLFSETLQRALKIGLLDQDMVDAFDPGLMFSIPRLAIVAGLVIYAKGPLNMDMPGDELSEMFRPFRTILIKIRDLLRNLSKQELYQLEKLLCTNEEINTKVPLGYSSIEAPSPEPNSSNNHNNNNSNSSDSGSAKTSTTSPHKAVERLVDHRNNNNSSSCSASAATQAVARSPSMLSLSAGSTPTASPAPSPTPSHSIASTSSAATTSTNPPANWSEDDDDDDEEREDDEEECGMLDSDEQDLNDDSDSDVDEYIEAQLKAIVAAADCASGYLIPNTNLGNLLQPQTAPLTDNFVASEDDEFGAEQEQEQQQRQREEQLQPSSEQQEEPSTSAAMLAARRTLQRLRLPSSSSENEQTTGSNQQSTIKTPNGGGQPMRSGSQRQRHHSHHHHHRHHHHHHHHRQHHHQQQHQPAQAEQHSHHHHHQTHPHRTSRSARKRCSQEHWESTTAEQQQTIDHGHGLASADTSNASSFSDDVSLAMRNTTARLKFKSTENLLHRLFVCIAGVADQLQTNFASDLRQILRSVFLINMSSSQEDIDIPEKTKESELFEFRASENDVIQESAGSNQSIYSAEEVNPELDNVFNMGNGNGGGTNAARHSAGAAMQRNNTIDLSGGGYNNNNNNNNNSGSSSSSNSSTVARSHVARSRSLGDQEAATSGTLQEEQRQQQQQQQAQLQLQMQRQRNNSVGSNSPSSSSSSSSSSEHNSPISTRSGSRRRLHSNSASMPSIGSTATTAAATAAATATTTTSATTTTTTTTMSPPAWIPDGKAPRCMSCQTPFTAFRRRHHCRNCGGVFCGVCSNASAPLPKYGLTKAVRVCRECYVREVRSSRTQAHSQASRPQAASAS

Annotated regions:
phrase: SPPAWIPDGKAPRCMSCQTPFTAFRRRHHCRNCGGVFCGVCSNASAPLPKYGLTKAVRVCRECY
type: DOMAIN
name: FYVE_LST2
description: Lateral signaling target protein 2, FYVE domain

phrase: DGKAPRCMSCQTPFTAFRRRHHCRNCGGVFCGVCSNASAPLPKYGLTKAVRVCRECYVRE
type: DOMAIN
name: Znf_FYVE-rel
description: Zinc finger, FYVE-related

phrase: WIPDGKAPRCMSCQTPFTAFRRRHHCRNCGGVFCGVCSNASAPLPKYGLTKAVRVCRECY
type: DOMAIN
name: Znf_FYVE
description: FYVE zinc finger

phrase: MSPPAWIPDGKAPRCMSCQTPFTAFRRRHHCRNCGGVFCGVCSNASAPLPKYGLTKAVRVCRECYVREV
type: DOMAIN
name: Znf_FYVE
description: FYVE zinc finger
Protein sequence:
MQSFPPEIWHHIFDHLISFDKFEAKNFGGLLRICRSSYVGGLHAIYYFPKLNPRNYHKFVDTISRKPTRKLVHHISLNNVSYASKASITSRLLRRCATNLETFSGPQSGLGFTALRAFSQCQKLKKIDLSILSEKIDLQYLFGGIQHLKHLEYIILPYLSIPAPMCTECWPSSLTFVGFSGGLTDDFLAESVFPPSLKSINITQCPLLTDAGIFSLLSKIGPNLSSVCVQYPMPELSRSGLDCIFQLCPNATTISIPANYITSTAFESIPESGHNVRSLEITYSGSLLTNISLIKADDLVGALVDGKLPNLHRLQWSIRLGWREESQDVQDLLELIDDQDGEVFITVK

Annotated regions:
Protein sequence:
MLPIWKLPVNHLLCHSFKSIPRTSAYAVRFAHHTSNNDDLEVKKNTVYERYERKLKSKAEELHMPVTNLLKKGQTKEREHVIPKKSFSAKKSLVGQNAKKSDLSGLNRYIDVEKIKELPTSTIEKLWRARNIGDDILSACIPKEIYEKMLSRARMYPYFVLPLPRGDKGIESHFLQWNFPNKNEAHLLVTSLLEYKLKGSYAAPHTIMLHFADLLNLKGITLMRCQFEPKKLSANDVQLLVLAIQKFYNASENTPLGKERLALLAAFSKGADFDLHKVATHMDMLE

Annotated regions:
Protein sequence:
MAAMECRDKAVVPPRRLVQARLPFKRLNPVPKEKHDAEAEGKKGKCSKSGLGQSKDSSTDTLHASTDNMENDCQLNSDVNFVPKLVNGKGPLDHFIQKSTKDNTDEIIVIIDSVDESNQRLSDDVDHVSFDSKASSAALTNGMLGKDMNKLSCLNSTQNSQTDDSMQTDVPCEAIANKGEDLVDGIQSCSGLTERNNLENTKVNQSELKDVIFEGKMPVVLLEDIMAAKSPQVTSLDGSVTSENETVELSHEGDSVLTNSSLSSLSVSSPEAQPVAETKRNTSPLAVSTPVRKVSQKLHKSSAEKEKLRLQRDQERADKLQKLQAEREEKGRLKEEAKAAKERAKEEAKKKKEEEKELKERERREKKEKEEKEKAEKLRVKEEKRKERQEALEAKLEEKRKKEEEKRLKEEEKRINAQKAEITRFFQKPKTPQAPKILAGSCGKFAPFEIKENMVLAPLCRIALYPDFLEQLDRLLRAQNSEVSFLRDLKCRKPRKTGPTFVNSSTDTVNSDVVVVDNCKTDAVPERGKFGRMKLLQFCENHRPAYWGTWNKKTTMIRPRNPWSKDSKLLDYEVDSDEEWEEEEPGESLSHSEGDDEEEGEDEDDDDGFFIPHGYLSEDEGVTEECDPENQKVRQKLKAKEWDELMAKGKRLHVLQPVKIGCIWESAQNDSGTNADLKILQQFTACILDSSVAEEEQQIQKCSKKRAKDQQILGQLLPLLHGNVNGSKVIIQEFQECCRQGLFSDVTAATDCGDTSPVSPNTSRPQTP

Annotated regions:
phrase: AKEWDELMAKGKRLHVLQPVKIGCIWESAQNDSGTNADLKILQQFTACILDSSVAEEEQQIQKCSKKRAKDQQILGQLLPLLHGNVNGSKVIIQEFQECCRQGLFSDVTAATDCGDTSPVSPNTSRPQT
type: DOMAIN
name: CAF1-p150_C2
description: Chromatin assembly factor 1 subunit p150, C-terminal

phrase: DKLQKLQAEREEKGRLKEEAKAAKERAKEEAKKKKEEEKELKERERREKKEKEEKEKAEKLRVKEEKRKERQEALEAKLEEKRKKEEEKRLKEEEKRINAQKAEITRFFQKPKTPQAPKILAGSCGKFAPFEIKENM
type: DOMAIN
name: CAF-1_p150_acidic
description: Chromatin assembly factor 1 p150 subunit, acidic region

phrase: KLLQFCENHRPAYWGTWNKKTTMIRPRNPWSKDSKLLDYEVDSDEEWEEEEPGESLSHSEGDDEEEGEDEDD
type: DOMAIN
name: CAF1A_DD
description: Chromatin assembly factor 1 subunit A, dimerization domain

phrase: AAMECRDKAVVPPRRLVQARLPFKRLNPVPKEKHDAEAEGKKGKCSKSGLGQSKDSSTDTLHASTDNMENDCQLNSDVNFVPKLVNGKGPLDHFIQKSTKDNTDEIIVIIDSVDESNQRLSDDVDHVSFDSKASSAALTNGMLGKDMNKLSCLNSTQNSQTDDSMQTDVPCEAIA
type: DOMAIN
name: CAF1_p150_N
description: Chromatin assembly factor 1 subunit p150, N-terminal
Protein sequence:
MKPNIKDLSLSELAAFLDERHHPPYRAQQIRQWLFQRRAREFAEMTNLPRELRDALAESFSISSLTERQRAESRDGTVKFLFGLADGQSVESVLIPEPKRLTLCISTQAGCAYGCAFCATALLGFKRNLSASEIVDQIVEAGRTAGDSARITNIVFMGMGEPLANYAHTLRAIEIITDASWGLGIAPRRVTLSTVGLIPQIEKLMQETNVSLAISLHAATDELRGRLMPVNRKYPLERLIDCCRKLPLPRRKRITFEYVLLGGVNDSLADAQALCKVLGGVPSKVNVIPFNPHPGSAFERPADQTVKCFQQVLFDHGIQANVRRARGDDIAAACGQLQGQAERHWRDAVQRKAC

Annotated regions:
phrase: NIKDLSLSELAAFLDERHHPPYRAQQIRQWLFQRRAREFAEMTNLPRELRDALAESFS
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: LTLCISTQAGCAYGCAFCATALLGFKRNLSASEIVDQIVEAGRTAGDSARITNIVFMGMGEPLANYAHTLRAIEIITDASWGLGIAPRRVTLSTVGLIPQIEKLMQETNVSLAISLHAATDELRGRLMPVNRKYPLERLIDCCRKLPLPRRKRITFEYVLLGGVNDSLADAQALCKVLGGVPSKVNVIPFNPHPGSAFERPADQTVKCFQ
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: KPNIKDLSLSELAAFLDERHHPPYRAQQIRQWLFQRRAREFAEMTNLPRELRDALAESFSISSLTERQRAESRDGTVKFLFGLADGQSVESVLIPEPKRLTLCISTQAGCAYGCAFCATALLGFKRNLSASEIVDQIVEAGRTAGDSARITNIVFMGMGEPLANYAHTLRAIEIITDASWGLGIAPRRVTLSTVGLIPQIEKLMQETNVSLAISLHAATDELRGRLMPVNRKYPLERLIDCCRKLPLPRRKRITFEYVLLGGVNDSLADAQALCKVLGGVPSKVNVIPFNPHPGSAFERPADQTVKCFQQVLFDHGIQANVRRARGDDIAAACGQLQGQAERH
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: EPKRLTLCISTQAGCAYGCAFCATALLGFKRNLSASEIVDQIVEAGRTAGDSARITNIVFMGMGEPLANYAHTLRAIEIITDASWGLGIAPRRVTLSTVGLIPQIEKLMQETNVSLAISLHAATDELRGRLMPVNRKYPLERLIDCCRKLPLPRRKRITFEYVLLGGVNDSLADAQALCKVLGGVPSKVNVIPFNPHPGSAFERPADQTVKCFQQVLFDHGIQANVRRARGD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: ISTQAGCAYGCAFCATALLGFKRNLSASEIVDQIVEAGRTAGDSARITNIVFMGMGEPLANYAHTLRAIEIITDASWGLGIAPRRVTLSTVGLIPQIEKLMQETNVSLAISLHAATDELRGRLMPVNRKYPLERLIDCCRKLPLPRRKRITFEYVLLGGVND
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MGCCGCSGGCGSGCGGCGSGCGGCGSGCGGYGSGCGGCGSSCCVPVCCCKPVCCCVPACSCSSCGSCGGSKGDCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGGSKGGCGSCGCSQCNCCKPCCCSSGCGSCCQSSCCNPCCCQSSCCVPVCCQSSCCKPCCCQSSCCVPVCCQCKI

Annotated regions:
Protein sequence:
MADTQYILPNDIGVSSLDCREAFRLLSPTERLYAHHLSRAAWYGGLAVLLQTSPEAPYIYALLSRLFRAQDPDQLRQHALAEGLTEEEYQAFLVYAAGVYSNMGNYKSFGDTKFVPNLPKEKLERVILGSKAAQQHPEEVRSLWQTCGELMFSLEPRLRHLGLGKEGVTTYFSGDCAMEDAKLAQDFLDSQNLSAYNTRLFKVVGQEGKYHYEVRLASVLNTEPALDSELTSKLKSYEFQGNHFQVTRGDYAPILQKVVEHLEKAKAYAANSHQEQMLAQYVESFTQGSIEAHKRGSRFWIQDKGPIVESYIGFIESYRDPFGSRGEFEGFVAMVNKDMSAKFERLVASAEQLLKELPWPPAFEKDKFLTPDFTSLDVLTFAGSGIPAGINIPNYDDLRQTEGFKNVSLGNVLAVAYATKREKLTFMEEEDKDLYIRWKGPSFDVQVGLHELLGHGSGKLFVQDEKGAFNFDQETVINPETGEQIQSWYRSGETWDSKFSTIASSYEECRAESVGLYLCLNPQVLQIFGFEGTDAEDVIYVNWLNMVRAGLLALEFYTPETANWRQAHMQARFVILRVLLEAGEGLVTVTPTTGSDGRPDARVHLDRSKIRSVGKPALERFLRRLQVLKSTGDVVAGRALYEGYAAVTDAPPECFLTLRDTVLLRKESRKLIVQPNTRLEGSEVQLVEYEASAAGLIRSFCERFPEDGPELEEVLTQLATADAQFWRDQVQEAPSGQA

Annotated regions:
Protein sequence:
MIQAGLRIDVDTFRGTRDGVPRLLDLLDEAGLKATFFFSVGPDNMGRHLWRLARPAFFWKMLRSRAASLYGWDILLAGTAWPGKPIGRELGPLMRRTQAAGHEVGLHAWDHHAWQTHVGVWSAQQLGEQIRRGSDCLADILGQPVRCSAAAGWRADGRVVEAKQPFGFRYNSDCRGRGAFRPRLADGSPGIPQVPVNLPTFDEVVGPGLPREAYNDFILERFAAGRDNVYTIHAEVEGLLLAPAFRELLRRAERRGIRFRPLGELLPDDPRSLPLAELVRGRLAGREGWLGVRQP

Annotated regions:
phrase: IQAGLRIDVDTFRGTRDGVPRLLDLLDEAGLKATFFFSVGPDNMGRHLWRLARPAFFWKMLRSRAASLYGWDILLAGTAWPGKPIGRELGPLMRRTQAAGHEVGLHAWDHHAWQTHVGVWSAQQLGEQIRRGSDCLADILGQPVRCSAAAGWRADGRVVEAKQPFGFRYNSDCRGRGAFRPRLADGSPGIPQVPVNLPTFDEVVGPGLPREAYNDFILERFAAGRDNVYTIHAEVEGLLLAPAFRELLRRAERRGIRF
type: DOMAIN
name: NODB_dom
description: NodB homology domain

phrase: GTRDGVPRLLDLLDEAGLKATFFFSVGPDNMGRHLWRLARPAFFWKMLRSRAASLYGWDILLAGTAWPGKPIGRELGPLMRRTQAAGHEVGLHAWDHHAWQTHVGVWSAQQLGEQIRRGSDCLADILGQPVRCSAAAGWRADGRVVEAKQPFGFR
type: DOMAIN
name: NODB_dom
description: NodB homology domain
Protein sequence:
MSSQVRVAVTQAEPVWLDLDATVKKTCDLIVEAAANGAQLVAFPECWIPGYPAWIWTRPVDMRLSSTYIQNSLKIDSPQMASIQKCAAENKIVVVLGFSENLHNSLYISQAIIGSDGKILTTRKKIKPTHMERTIFGDSFGDCLQSVVDTSAGRVGALSCWEHIQPLLKYHTYAQREQIHVAAWPPLFPHNEDGSLFSMSSEGTSSIARTYAIESQSFVLHTTTVIGQSGVDRMATHGGALMSTPGGGCSAIFGPDGRQLSQPIPSTEEGIIYADLDLDQIYHSKAFVDVCGHYSRPDLLWLGVEGSVKRHVRENAATVAAEAEQQEQ

Annotated regions:
phrase: GAQLVAFPECWIPGY
type: CONSERVED_SITE
name: Nitrilase/CN_hydratase_CS
description: Nitrilase/cyanide hydratase, conserved site

phrase: GALSCWEHIQPLL
type: CONSERVED_SITE
name: Nitrilase/CN_hydratase_CS
description: Nitrilase/cyanide hydratase, conserved site

phrase: VRVAVTQAEPVWLDLDATVKKTCDLIVEAAANGAQLVAFPECWIPGYPAWIWTRPVDMRLSSTYIQNSLKIDSPQMASIQKCAAENKIVVVLGFSENLHNSLYISQAIIGSDGKILTTRKKIKPTHMERTIFGDSFGDCLQSVVDTSAGRVGALSCWEHIQPLLKYHTYAQREQIHVAAWPPLFPHNEDGSLFSMSSEGTSSIARTYAIESQSFVLHTTTVIGQSGVDRMATHGGALMSTPGGGCSAIFGPDGRQLSQPIPSTEEGIIYADLD
type: DOMAIN
name: C-N_Hydrolase
description: Carbon-nitrogen hydrolase

phrase: RVAVTQAEPVWLDLDATVKKTCDLIVEAAANGAQLVAFPECWIPGYPAWIWTRPVDMRLSSTYIQNSLKIDSPQMASIQKCAAENKIVVVLGFSENLHNSLYISQAIIGSDGKILTTRKKIKPTHMERTIFGDSFGDCLQSVVDTSAGRVGALSCWEHIQPLLKYHTYAQREQIHVAAWPPLFPHNEDGSLFSMSSEGTSSIARTYAIESQSFVLHTTTVIGQSGVDRMATHGGALMSTPGGGCSAIFGPDGRQLSQPIPSTEEGIIYADLDLDQI
type: DOMAIN
name: C-N_Hydrolase
description: Carbon-nitrogen hydrolase
Protein sequence:
MSRVGKSPIALQGAEVKLADGAITVKGPLGTITQAINPLVNVANNDGTLNLSPVDESREANALSGTMRAIIANAVQGVTKGFERKLTLVGVGYRAQAQGDKLNLSLGFSHPVVHQMPEGVKAETPTQTEIVIKGINKQQVGQVAAEVRGYRPPEPYKGKGVRYSDEVVILKETKKK

Annotated regions:
phrase: PEPYKGKG
type: CONSERVED_SITE
name: Ribosomal_uL6_CS
description: Large ribosomal subunit protein uL6, conserved site

phrase: VGVGYRAQAQGDKLNLSLGFSHPVVHQMPEGVKAETPTQTEIVIKGINKQQVGQVAAEVRGYRPPEPYKGKGVR
type: DOMAIN
name: Ribosomal_uL6_a/b-dom
description: Large ribosomal subunit protein uL6, alpha-beta domain

phrase: GAEVKLADGAITVKGPLGTITQAINPLVNVANNDGTLNLSPVDESREANALSGTMRAIIANAVQGVTK
type: DOMAIN
name: Ribosomal_uL6_a/b-dom
description: Large ribosomal subunit protein uL6, alpha-beta domain
Protein sequence:
MVYGVIFGANSYEHEISIVSAVVLKKVLKAQKKFIFCDKNKEFFLIDEEKMNAKTFSSGAYKKEKALVLKQGGFFIKTMLGEKKLDMDVAVNIVHGKDGEDGKIAALLDFYGIKYIGPRIEASVLSFNKALTKLYAQSVGVKTLDYKVLNLHKEQNVSLSFPCILKPARLGSSIGISIVKDESELKYAKDVAFEFDEDVVVEQFVSNIKEYNLAGCMIGEKMEFSIIEEPRKNEILDFEQKYLGFSESSKVSEANISEELKQKLRDNFTRIYNPLFKGALIRCDFFVIDDEVYLNEINPNPGSLANYLFEDFTNIVDNLAKNIELEKQIKIDYAFIHSINGQKGKL

Annotated regions:
phrase: GVIFGANSYEHEISIVSAVVLKKVLKAQKKFIFCDKNKEFFLIDEEKMNAKTFSSGAYKKEKALVLKQGGFFIKTMLGEKKLDMDVAVNIVHGKDGEDGKIAALLDFYGIKYIG
type: DOMAIN
name: Dala_Dala_lig_N
description: D-alanine--D-alanine ligase, N-terminal domain

phrase: HGKDGEDGKIA
type: CONSERVED_SITE
name: D-Ala_lig_Van_CS
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site

phrase: KLYAQSVGVKTLDYKVLNLHKEQNVSLSFPCILKPARLGSSIGISIVKDESELKYAKDVAFEFDEDVVVEQFVSNIKEYNLAGCMIGEKMEFSIIEEPRKNEILDFEQKYLGFSESSKVSEANISEELKQKLRDNFTRIYNPLFKGALIRCDFFVIDDEVYLNEINPNPGSLANYLFEDFTNIVDNLAKNI
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold

phrase: LFKGALIRCDFFVIDDEVYLNEINPNP
type: CONSERVED_SITE
name: D-Ala_lig_Van_CS
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site

phrase: VLNLHKEQNVSLSFPCILKPARLGSSIGISIVKDESELKYAKDVAFEFDEDVVVEQFVSNIKEYNLAGCMIGEKMEFSIIEEPRKNEILDFEQKYLGFSESSKVSEANISEELKQKLRDNFTRIYNPLFKGALIRCDFFVIDDEVYLNEINPNPG
type: DOMAIN
name: Dala_Dala_lig_C
description: D-alanine--D-alanine ligase, C-terminal
Protein sequence:
MSLRGKDIISISDIKRSDLERIFRVASSRFQGDELKGKIIAMAFFEPSTRTRFSFETATLRLGGNYIGFEAAQSTSLAKGESFSDTIRMLDSYADGIVVRHSLEGAAKLAAELAEAPVINAGDGTKNHPTQAMIDLYTIWKERGNLDNLTYGVLGDLRYGRAAASFLKALNLYSPKKVYLICPEGLRPKQELLDSLKMPWEFSDLKDALPELDVLYVTRVQKERFPDPSEYERVKGSYKVDSSILKDAKEGLMILHPLPRVDEISLDVDSTPYAYYFKQAANGVPVRMALLSEVIP

Annotated regions:
phrase: NLTYGVLGDLRYGRAAASFLKALNLYSPKKVYLICPEGLRPKQELLDSLKMPWEFSDLKDALPELDVLYVTRVQKERFPDPSEYERVKGSYKVDSSILKDAKEGLMILHPLPRVDEISLDVDSTPYAYYFKQAANGVPVRMALL
type: DOMAIN
name: Asp_carbamoyltransf_Asp/Orn-bd
description: Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain

phrase: KDIISISDIKRSDLERIFRVASSRFQGDELKGKIIAMAFFEPSTRTRFSFETATLRLGGNYIGFEAAQSTSLAKGESFSDTIRMLDSYADGIVVRHSLEGAAKLAAELAEAPVINAGDGTKNHPTQAMIDLYTI
type: DOMAIN
name: Asp/Orn_carbamoyltranf_P-bd
description: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding
Protein sequence:
MDLARSDIIPHLLCLFQEIIQANIQKVSEAYDLELKIMNILTLWRNGSDNLISDNDDYMKKGLFFSRSNDPLALQARYAQMYDDLFKLNNYKVPDDVVRKHDTKILDIILKESSVPFWYDISDDEAHESMLPEFRLQDIHEFRLNLKRVAVVPDESEEIQMDESQSDKRRRKKRMEKSRPVWLSGSENDRRIELNDSLKPSQKFETKLSSYLLNRLMNEMNPHYCGHPLPALFVTLIMLKAYSLKNKFFSYGIRYMELVCNEIGGPDLNTRTFPVLFGSDGSFVGTRVYSHYPIKLRMILNDLTYLLTYSDLHKFQEFELDVNDEVLLHMLHSPNDGRQLKKAVTRLNLYYGLKFNPKTTDCGVVNGMDFTHKHPITKTADFTSPVLPMTNSFNKAEICYGHSSKILNRAVFTDTVRGYIREDLKNVADLDLPKLHEHVSKLVDMRVNYTIIYDLMFLRVMLNLGGYSRSNQITDFRKTIDEITKMNEDFLSGADPEKNIDILNAWMAPTMEDCGYRLTKSILFGKFRKAKYPSDLEAKSNIDYYVTARSAGIGNLRISIETDKRKYKVRTTSKSAFVNAMGSGILDVNPVSNEPMMLTDYLLTQTPETRANLEAAIDSGSISDSELMRILGQNSIGSRSTTAWRPVRPIYINVLQAHLAQAFIIGPHINATVNQHESQPTSLWFTGDDLGVGFATLYQNGTADIIAPAIEASSTGKALSVLADCSSWDQTFLTATIIPYYNGIKKALLEYQQADMRNFYMIDSSRTGVPGMKLSEIVDWFNSFQTKRIFNASYLKERHSFVVKYMWSGRLDTFFMNSVQNALITRRIAEEVSLKVSNTGLSWFQVAGDDAIMVYDGSSISTTEQVTRVNEITVRNYEESNHIINPQKTVISHISGEYAKIYYYAGMHFRDPSIQLHESEKDSGASDVTESLRGFGQVIYEYNKRAIGTLRVNALYGRLIAGLAYSVNVRRYDASKRTYANMKYYPPPTSVIAPAAFKGGLGLSFTGLSLNEVLFIKMHLHEAVSQGLHVISMISFEANEVVSNSLSAYYLKDQKDLLRDMKLGKHLEKVKGISFKSSDLAFSGSDFSQGLNLKRESIDKVKLEVSRKSIRDLRSSGISVPSTHAYENLPYASLHQSFKSLKVDRDTSKFTNERLLVSLLEYKSDIPRVSVTSQYPVYDLINISKVDELNVRSGGPVRFISTPIEGKLLEENIGTRQGVQFKNRGYGGSQEVLHFIRSNGLVITEQALIDLIIKSGVLLMINPQRGLIDLFQSLSGDTASSMHLANFFMAEKPHWEDNAISLTIAGSLLENCDSRIENVKNFVSVLATGMQKDLQRMFYYVGFVYYAQRLIWSGGHSSKIFVSIDEDKLADFLRGSKPITRRRKAMAGTKREPINLSANFSYEISEPDREISEYDPLVLCHPLSMPFFGNWQEKYSVMQSDEQM

Annotated regions:
phrase: LGVGFATLYQNGTADIIAPAIEASSTGKALSVLADCSSWDQTFLTATIIPYYNGIKKALLEYQQADMRNFYMIDSSRTGVPGMKLSEIVDWFNSFQTKRIFNASYLKERHSFVVKYMWSGRLDTFFMNSVQNALITRRIAEEVSLKVSNTGLSWFQVAGDDAIMVYDGSSISTTEQVTRVNEITVRNYEESNHIINPQKTVISHISG
type: DOMAIN
name: RNA-dir_pol_reovirus
description: RNA-directed RNA polymerase, reovirus
Protein sequence:
MRPPEIPEGHADTSGQFLVAHPKMPANIFAHSVIYVVSHNADGAMGLIVNRLAGAGPLGKLLEAFGLASKAQREIKLYLGGPVGIGQGFVLHSDDYAGASTRALKKGLSLSTGLDVLEAIARGRGPRQVRMLFGYAGWSPGQLDGEIARGDWLLAPADTSLIFSEEPDKVWEEALKHAGLPL

Annotated regions:
Protein sequence:
MNLLDPFMKMTEEQDKCISDAPSPTMSDDSAGSPCPSGSGSDTENTRPQENTFPKGDPDLKKESDEDKFPVCIREAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKSVKNGQSEQEEGSEQTHISPNAIFKALQADSPQSSSSISEVHSPGEHSGQSQGPPTPPTTPKTDAQQPGKQDLKREGRPLAEGGRQPPHIDFRDVDIGELSSDVISNIETFDVNEFDQYLPPNGHPGVPATHGQVTTYSGTYGISSSASSPAGAGHAWMAKQQPQPPQPPAQPPAQHTLPALSGEQGPAQQRPHIKTEQLSPSHYSEQQQHSPQQQQQQQQQLGYGSFNLQHYGSSYPPITRSQYDYTEHQNSGSYYSHAAGQSGGLYSTFTYMNPTQRPMYTPIADTSGVPSIPQTHSPQHWEQPVYTQLTRP

Annotated regions:
phrase: VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQHKKDHPDY
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain

phrase: HVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYK
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain

phrase: VKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQHKKDHPDY
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain

phrase: SPTMSDDSAGSPCPSGSGSDTENTRPQENTFPKGDPDLKKESDEDKFPVCIREAVSQVLKGYDWTLVPMPV
type: DOMAIN
name: Sox_N
description: Sox developmental protein N-terminal
Protein sequence:
MARKITFITSNQNKLIEVIDILGDAVDLKSQSLDLTEIQGTIEEISIDKCRRAANAVNGPVLVEDTCLCFNALKELPGPYIKWFLNALGHQGLNDLLMAFPDKSAQAVCTFAYSEGPGQEPILFQGRTTGKIVPARGPTNFGWDPIFEYNGQTYAEMNKSEKNKISHRFRALEKLQAWLQQTSC

Annotated regions: