nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MEVFGDNKMFYMRDTWREGTMICDVLPINPSSNGVWPQQKFSDPNINVHFWNYAFPHLQMIFLIISFLWQFLHFFLRRLGMIRFTSHMLTGVLLSKSFLKENSAARRFFSTEDYKEIVFSLTAACSYMMFWFLMGVKMDTGLIRTTGRKAITIGLSSVLLSTLVCSVIFFGNLRDVGTKNSDHTLNSLEYVVIYSIQCLSSFPVVGNLLFELRLQNSELGRLAISSAVISDFSTSILASVLIFMKELKDEQTRLGSVFIGDVIAGNRPLMRAGIVVLFVCIAIYVFRPLMFYIIKQTPSGRPVKAIYLSTIIVMVSGSAILANWCKQSIFMGPFILGLAVPHGPPLGSAIIQKYESAIFGTFLPFFIASSSTEIDISALFGWEGLNGIILIMVTSFVVKFIFTTVPALFYGMPMEDCFALSLIMSFKGIFELGAYALAYQRGSVRPETFTVACLYITLNSAIIPPILRYLYDPSRMYAGYEKRNMQHLKPNSELRILSCIYRTDDISPMINLLEAICPSRESPVATYVLHLMELVGQANPIFISHKLQTRRTEETSYSNNVLVSFEKFRKDFYGSVFVSTYTALSMPDTMHGDICMLALNNTTSLILLPFHQTWSADGSALISNNNMIRNLNKSVLDVAPCSVGVFVYRSSSGRKNISSGRKTINGTVPNLSSYNICMIFLGGKDDREAVTLATRMARDPRINITIVRLITTDEKARENTVWDKMLDDELLRDVKSNTLVDIFYSEKAIEDAAETSSLLRSMVSDFDMFIVGRGNGRTSVFTEGLEEWSEFKELGIIGDLLTSQDFNCQASVLVIQQQQLMI

Annotated regions:
phrase: FLHFFLRRLGMIRFTSHMLTGVLLSKSFLKENSAARRFFSTEDYKEIVFSLTAACSYMMFWFLMGVKMDTGLIRTTGRKAITIGLSSVLLSTLVCSVIFFGNLRDVGTKNSDHTLNSLEYVVIYSIQCLSSFPVVGNLLFELRLQNSELGRLAISSAVISDFSTSILASVLIFMKELKDEQTRLGSVFIGDVIAGNRPLMRAGIVVLFVCIAIYVFRPLMFYIIKQTPSGRPVKAIYLSTIIVMVSGSAILANWCKQSIFMGPFILGLAVPHGPPLGSAIIQKYESAIFGTFLPFFIASSSTEIDISALFGWEGLNGIILIMVTSFVVKFIFTTVPALFYGMPMEDCFALSLIMSFKGIFELGAYALAYQRGSVRPETFTVACLYITLNSAIIPPI
type: DOMAIN
name: Cation/H_exchanger_TM
description: Cation/H+ exchanger, transmembrane domain
Protein sequence:
MAEIRIRNTEERIKGEENVRAFLDSQEVLYEHWDPSKLSEELQDKFVLSDEEKAAILKTYETEISDLAARRGYRTWDIISLSDATPNLDELLKKFENVHTHTEDEVRAITAGRGIFIIKGTDDVGYFDVELEAGDVISVPEHKAHFFTLMENRQIVAVRLFIETEGWIAHPYADPTFSK

Annotated regions:
Protein sequence:
MLFKELVSLYESLRSTSSRLEKTAMIAAFLQQAPVDELPVIVTFLTGRIFPEWDQRKIGIASQSMIKIISTITHNPEDAVVESYKKTGHLGVTAEEMFQKRRQVTFFEPEDITVKEVAETFYEIARSSGAGSSAKKQKILIGLLHRATTPKEAHYIVSLTIEYVLSGAKEGVMEDAIGQAFGATLDQVRRAHMLTSDLGETARIAKTEGAAGLEAITIRPMRPVRPMLAQNVSSIREALDTMGGVAEFEMKYDGARLQIHKVGKDVKLYSRRLEDLTDALPEIVGYVRESVKSDTAILDSECIAIDKDTGRPIPFQNILTRLRRIHKVEETQKQFPLILRPFDVLFNQGQSTIDLPLRERRKILEEIVIATDSVIQPARALVTDQEEKAQELFEESVKSGNEGLMGKDLNATYTPGVRGKKMVKIKSVLDTLDLAIVSAEWGHGRKAGWLTSFEVAALDEETGDYVILGRVASGFSDEQLIEMTEKLKPLITGEHGRIVDVRPEIIVEVKFEEIQKSPIYSSGYALRFPRLVRVRDDLSPEEVNSFTRVMNIYNVQQRYSISENGLRK

Annotated regions:
phrase: ETQKQFPLILRPFDVLFNQGQSTIDLPLRERRKILEEIVIATDSVIQPARALVTDQEEKAQELFEESVKSGNEGLMGKDLNATYTPGVRGKKMVKIKSVLDTLDLAIVSAEWGHGRKAGWLTSFEVAAL
type: DOMAIN
name: DNA_ligase_ATP-dep_cent
description: DNA ligase, ATP-dependent, central

phrase: AGWLTSFEVAALDEETGDYVILGRVASGFSDEQLIEMTEKLKPLITGEHGRIVDVRPEIIVEVKFEEIQKSPIYSSGYALRFPRLVRVRD
type: DOMAIN
name: DNA_ligase_ATP-dep_C
description: DNA ligase, ATP-dependent, C-terminal

phrase: FKELVSLYESLRSTSSRLEKTAMIAAFLQQAPVDELPVIVTFLTGRIFPEWDQRKIGIASQSMIKIISTITHNPEDAVVESYKKTGHLGVTAEEMFQKRRQVTFFEPEDITVKEVAETFYEIARSSGAGSSAKKQKILIGLLHRATTPKEAHYIVSLTIEYVLSGAKEGVMEDA
type: DOMAIN
name: DNA_ligase_ATP-dep_N
description: DNA ligase, ATP-dependent, N-terminal

phrase: PMLAQNVSSIREALDTMGGVAEFEMKYDGARLQIHKVGKDVKLYSRRLEDLTDALPEIVGYVRESVKSDTAILDSECIAIDKDTGRPIPFQNILTRLRRIHKVEETQKQFPLILRPFDVLFNQGQSTIDLPLRERRKILEEIVIATDSVIQPARALVTDQEEKAQELFEESVKSGNEGLMGKDLNATYTPGVRGKKMVKI
type: DOMAIN
name: DNA_ligase_ATP-dep_cent
description: DNA ligase, ATP-dependent, central
Protein sequence:
MKLSGRRILLIIGGGIAAYKSLDLIRRLRERGALVRVVMTQAATNFITPLAAGALSADHVFLDLFDRTDEQDVGHIRLARECDLVLVAPATADLMAKAAHGLANDLASTVLLATDRPVLMAPAMNPKMWSNKATQRNLATLQADGVHVIGPATGEMAESCEAGVGRMVEPTAIADAVEVHLTPSAQPLRGKKIIVTSGPTHEPIDPVRYLANRSSGRQGHAIAEALSKLGADVVLIRGPVAIPDPVGPKTIQVETARQMLAAVEAQLPSDAAIMVAAVADWRPESEGGEKIKKKVGESTPSFALIENPDILRTVGHHRQRPALVIGFAAETQNLIDNAQAKLARKGADFIVANDVSTETGIMGGTRNQVRLVSKAGVEEWPELDKTQVAERLARRVADFFVNEIIEI

Annotated regions:
phrase: LRGKKIIVTSGPTHEPIDPVRYLANRSSGRQGHAIAEALSKLGADVVLIRGPVAIPDPVGPKTIQVETARQMLAAVEAQLPSDAAIMVAAVADWRPESEGGEKIKKKVGESTPSFALIENPDILRTVGHHRQRPALVIGFAAETQNLIDNAQAKLARKGADFIVANDVSTETGIMGGTRNQVR
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal

phrase: RILLIIGGGIAAYKSLDLIRRLRERGALVRVVMTQAATNFITPLAAGALSADHVFLDLFDRTDEQDVGHIRLARECDLVLVAPATADLMAKAAHGLANDLASTVLLATDRPVLMAPAMNPKMWSNKATQRNLATLQADGVHVIGPATGEMAESCEAGVGRMVEPTAIA
type: DOMAIN
name: Flavoprotein
description: Flavoprotein
Protein sequence:
MAGNAAVGVLALQGDVSEHISAFESAIQNLGLNIPVVPVRKAEQILDLMALAIPGGESTTIMRLIEKNGMRNIIQNFKGGIFATCAGMVVSARDLINETRFTPLDLLDITVNRNAFGRQRESFEADLQISGFDTPFHAIFIRAPVITRAGPDVTILAEIPQGIVAAKKGKKLILSFHPEISHDLRMHEYFLKDMLG

Annotated regions:
phrase: ALAIPGGEST
type: CONSERVED_SITE
name: PdxT/SNO_CS
description: PdxT/SNO family, conserved site
Protein sequence:
MNCKILFRKELNDSECELSLLLVGDSDMKEINRLRRGKDKTTDVLSFPLEFDFSPLQKILPKNTSSDQKMFPPIALGEIVISIDTLQKQAKEIGHSEKDEFYRLLVHGFLHLLGYDHERGDKEEHIMKLKEDECLEILQGL

Annotated regions:
phrase: HGFLHLLGYD
type: CONSERVED_SITE
name: YbeY_CS
description: Endoribonuclease YbeY, conserved site
Protein sequence:
MGSVSNQQFAGAKPGEEPSGDSPKAENESQPLHGSGICKWFNVRMGFGFLSMTAKGGAMLDSPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKKSSKGLESIRVTGPGGVFCIGSERRPKSKSLQKRRSKGDRCYNCGGLDHHAKECKLPPQPKKCHFCQSISHMVANCPAKAQQSPSSQGKPAYFREKEDMHSSALLPETRE

Annotated regions:
phrase: RCYNCGGLDHHAKEC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: SGICKWFNVRMGFGFLSMTAKGGAMLDSPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKKSSKGLESIRVTG
type: DOMAIN
name: CSD
description: Cold-shock domain

phrase: RCYNCGGLDHHAKEC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: SGICKWFNVRMGFGFLSMTAKGGAMLDSPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKKSSKGLESIRVT
type: DOMAIN
name: CSP_DNA-bd
description: Cold-shock protein Csp, DNA-binding

phrase: GICKWFNVRMGFGFL
type: DOMAIN
name: CSP_DNA-bd
description: Cold-shock protein Csp, DNA-binding

phrase: RSLKEGEAVEFTFKKSSK
type: DOMAIN
name: CSP_DNA-bd
description: Cold-shock protein Csp, DNA-binding

phrase: KCHFCQSISHMVANCP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: RCYNCGGLDHHAKECK
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: GICKWFNVRMGFGFLSMTAKGGAMLDSPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKKSSKGLESIRVT
type: DOMAIN
name: CSP_DNA-bd
description: Cold-shock protein Csp, DNA-binding

phrase: PKKCHFCQSISHMVANCPAKAQQSPSSQGK
type: DOMAIN
name: Lin-28A-like_Znf-CCHC_2
description: Lin-28A-like, second zinc knuckle

phrase: HGSGICKWFNVRMGFGFLSMTAKGGAMLDSPVDVFVHQSKLHMEGFRSLKEGEAVEFTFKKSSKGLESIRVT
type: DOMAIN
name: CSP_DNA-bd
description: Cold-shock protein Csp, DNA-binding
Protein sequence:
VHWEDAEKQYIVSVFSKIDVDHVGANTLERVLIVFPWTKRYFNSFGDLSSPGAIKHNNKVSAHGRKVLAAIIECTRHFGNIKGHLANLSHLHSEKLHVDPHNFRVLGQCLRIELAAALGFKEFTPERNAYFQKFMDVISHSLGREYH

Annotated regions:
phrase: NTLERVLIVFPWTKRYFNSFGDLSSPGAIKHNNKVSAHGRKVLAAIIECTRHFGNIKGHLANLSHLHSEKLHVDPHNFRVLGQCLRIELAAALGFKEFTPERNAYFQKFMDVISH
type: DOMAIN
name: Globin
description: Globin

phrase: DAEKQYIVSVFSKIDVDHVGANTLERVLIVFPWTKRYFNSFGDLSSPGAIKHNNKVSAHGRKVLAAIIECTRHFGNIKGHLANLSHLHSEKLHVDPHNFRVLGQCLRIELAAALGFKEFTPERNAYFQKFMDVISHSLGREY
type: DOMAIN
name: Globin
description: Globin
Protein sequence:
MDVRQRLISSMVISLGLTIISEGIVLIGIASLLHISLFFIFPALVIFWLFQWIISPYVVGRGGYEVSPNDPQYGWLYNLVRRIAEESKIKPPRVFVIDAPYPNAFAYGNRLGGMRVGITLPLLNILDVDELTAVIAHEVGHIKHRDVEIGMTIGLIPTVLGYISTLLMNFGYLALFLAADEIELLFAIAALAIGFVIFVVTFILQIFVLWFNRLRESYADYNSFLVLGEGSKALATALAKIEIYMQNIRIDPFTGIIVTAPPVKVEEKDPHLLVEQWLRTKVSAFKDILSTHPYPARRAQMIYRLIYGSNI

Annotated regions:
phrase: GWLYNLVRRIAEESKIKPPRVFVIDAPYPNAFAYGNRLGGMRVGITLPLLNILDVDELTAVIAHEVGHIKHRDVEIGMTIGLIPTVLGYISTLLMNFGYLALFLAADEIELLFAIAALAIGFVIFVVTFILQIFVLWFNRLRESYADYNSFLVLGEGSKALATALAKIEIYMQNIRIDPFTGIIVTAPPVKVEEKDPHLLVEQWLRTKVSAFKDILSTHPYPARRAQM
type: DOMAIN
name: Peptidase_M48
description: Peptidase M48
Protein sequence:
MTRCHLHKFGGSSLADADCYRRVAHILLTHGHSDDLIVVSAAGKSTNFLYRLLELCDTDQLWQEELQVLVSYQQNLIEQLLSNEQARSLRERLATDKSQLTSLLSLDELNDYQRNQVVSFGERWSSCLLAALLRESGVAATDVDARTLLVADEGAVPQIRLGESRQKVQALLEAHPQERLVITGFICANEQGDTLLLGRNGSDFSATLLASLADIERVTIWTDVEGVFNADPNRINDAKLLKSMSLTEANRLAHLGSPVLHNRTLQPLFDTEVSLAVRSSYAPHTDFTLIAPKSSSASAPVVTSLSSVSLFSLTISVELPQLLACFAQAGLTPLAYWSLAHGRAELAFTHENQKQAQAIFEAKRSELGIDELQLRDDLGLVALVSADASLYRRGFSRLLSREAHPLCNDGLSLVTLVPKAQVNLLTQKVHRRCAGPRKRIGVLLLGIGNIGEAWIDLFKRARPVLNKELEVSVELVGLLSSKKALLSETDIDLSSWQQAFEERGTGWQYTHLFEQLQALNCDELIALDISASADLTLQYPEFFARGIHIVSANKLAGSGPLAFYQELKQQLGNRRLFWRYNASCGAGLPVQHALNDLHNSGDSIEAVGGIFSGTLCWLFEHYDAKKPFSELVLEAKGLGITEPDPRDDLSGRDMQRKLLILAREIGYDIELDDIELESLVPTKLAEIPLDDFIKRMAELDGEMLQQYQAAAEQNKVLRYVASLDSEQGQLKAKVGIQWVDRSHPYANLTPGDNVFVIRSDFYQDNPLI

Annotated regions:
phrase: TQKVHRRCAGPRKRIGVLLLGIGNIGEAWIDLFKRARPVLNKELEVSVELVGLLSSKKALLSETDIDLSSWQQAFEERGTGWQYTHLFEQLQALNCDELIALDISASADLTLQYPEFFARGIHIVSANKLAGSGPLAFYQELKQQLGNRRLFWRYNASCGAGLPVQHALNDLHNSGDSIEAVGGIFSGTLCWLFEHYDAKKPFSELVLEAKGLGITEPDPRDDLSGRDMQRKLLILAREIGYDIELDDIELESLVPTKLAEIPLDDFIKRMAELDGEMLQQYQAAAEQNKVLRYVASLDSEQGQLKAKVGIQWVDRSHPYANLTPGDNVFVIRSDFYQDNPL
type: DOMAIN
name: Bifunc_Aspkin/hSer_DH
description: Bifunctional aspartokinase/homoserine dehydrogenase, homoserine dehydrogenase domain

phrase: HKFGGSSLADADCYRRVAHILLTHGHSDDLIVVSAAGKSTNFLYRLLELCDTDQLWQEELQVLVSYQQNLIEQLLSNEQARSLRERLATDKSQLTSLLSLDELNDYQRNQVVSFGERWSSCLLAALLRESGVAATDVDARTLLVADEGAVPQIRLGESRQKVQALLEAHPQERLVITGFICANEQGDTLLLGRNGSDFSATLLASLADIERVTIWTDVEGVFNADPNRINDAKLLKSMSLTEANRLAHLGSPVLHNRTLQPLFDTEV
type: DOMAIN
name: Asp/Glu/Uridylate_kinase
description: Aspartate/glutamate/uridylate kinase

phrase: AKGLGITEPDPRDDLSGRDMQR
type: CONSERVED_SITE
name: HDH_CS
description: Homoserine dehydrogenase, conserved site

phrase: GIGNIGEAWIDLFKRARPVLNKELEVSVELVGLLSSKKALLSETDIDLSSWQQAFEERGTGWQYTHLFEQLQALNCDELIALDISASADLTLQYPEFFARGIHIVSANKLAGSGPLAFYQELK
type: DOMAIN
name: Asp/hSer_DH_NAD-bd
description: Aspartate/homoserine dehydrogenase, NAD-binding

phrase: LHKFGGSS
type: CONSERVED_SITE
name: Aspartate_kinase_CS
description: Aspartate kinase, conserved site

phrase: PVQHALNDLHNSGDSIEAVGGIFSGTLCWLFEHYDAKKPFSELVLEAKGLGITEPDPRDDLSGRDMQRKLLILAREIGYDIELDDIELESLVPTKLAEIPLDDFIKRMAELDGEMLQQYQAAAEQNKVLRYVASLDSEQGQLKAKVGIQWVDRSHPYANLTPGDNVFVIRSDFYQ
type: DOMAIN
name: HDH_cat
description: Homoserine dehydrogenase, catalytic

phrase: HLHKFGGSSLADADCYRRVAHILLTHGHSDDLIVVSAAGKSTNFLYRLLELCDTDQLWQEELQVLVSYQQNLIEQLLSNEQARSLRERLATDKSQLTSLLSLDELNDYQRNQVVSFGERWSSCLLAALLRESGVAATDVDARTLLVADEGAVPQIRLGESRQKVQALLEAHPQERLVITGFICANEQGDTLLLGRNGSDFSATLLASLADIERVTIWTDVEGVFNADPNRINDAKLLKSMSLTEANRLAHLGSPVLHNRTLQPLFDTEVSLAVRSSYAPHTDFTLI
type: DOMAIN
name: AK-HSDH_N
description: Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain
Protein sequence:
MLRASILRASPAVRPLARQTRPQWRVVQRCYADNKNLGETAVPNPAPTVTPSSTEKATIPSSDIPKPPPAPETAGASRSAPTIQPATTPPTGPGSASIAPDPKQPKPKKKGRIRRLLFWLTILSGLGYAGGVWYSLVSDNFHDFFTEYVPYGEDAVAYFEEREFRKRVPWPCWDSPRLQPQNLVRRTSSSILRPQWAEWRVLPTRATATSGTKGPHTIANVQEKKQEAAQTATVVKEEAAAPAPAKPVNHLDHLAVPDANDAVVQDVVKIVNDIITVINADSAHDGKYNSALDKAKSELGRVVSDINLMKANLRKESEEKVKSAHDEFEQAAKELVQRLDHQMQAQEAHWKEEFENERERLSQTYKDRLRSELEAAEKVYEQKTKNELLQQSIHLQKSFTASVRERVEAERDGRLGKLNELSSSVHELEKLTAEWNSVVDANLKTQHLVVAVEAVKSALETQATPKPFVTELAALKEIAADDPVVSAAIASINPAAYQRGIPSPALLIDRFRRVAAEVRKAALLPEDAGVASHIASLAMSKVLFKKSGLAVGQDVEAVLARTEVLLEEGDLDAAAREMNGLQGWAKVLSKDWLGECRRVLEVRQALDVIATEARLNSLLVD

Annotated regions:
Protein sequence:
MADNSKTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVCTATEDYKDVAKVADQIGIPYYSVNFEKEYWDRVFEYFLAEYRLGRTPNPDVMCNKEIKFKAFLDYAMQLGADYVATGHYAQVETDENGVVHMLRGIDNNKDQTYFLSQLSQAQLAKTMFPLGGMEKSEVRAIAERAGLATAKKKDSTGVCFIGEKNFKEFLSNYLPAKKGNMVTEDGEIKGQHDGLMYYTIGQRQGLGIGGGGKTQEPWFVIGKDLTTNTLYVGQGFHHEKLYATHLEASEVHFTVDTPMPKEFDCTAKFRYRQADIPVHVSLSEDGTKATVTFKEPARAVTPGQAVVFYDGMECLGGGLIDRAYQDEKELQYV

Annotated regions:
phrase: KEFLSNYLPAKKGNMVTEDGEIKGQHDGLMYYTIGQRQGLGIGGGGKTQEPWFVIGKDLTTNTLYVG
type: DOMAIN
name: MnmA-like_central
description: tRNA-specific 2-thiouridylase MnmA-like, central domain

phrase: THLEASEVHFTVDTPMPKEFDCTAKFRYRQADIPVHVSLSEDGTKATVTFKEPARAVTPGQAVVFYDGMECLGGGL
type: DOMAIN
name: MnmA-like_C
description: tRNA-specific 2-thiouridylase MnmA-like, C-terminal domain
Protein sequence:
MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGRYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTTWRRK

Annotated regions:
phrase: AEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLEDGPQGTTW
type: DOMAIN
name: CysS_C
description: Cysteinyl-tRNA ligase, anticodon binding domain

phrase: RFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLL
type: DOMAIN
name: Cys-tRNA-synt_Ia_DALR
description: Cysteinyl-tRNA synthetase, class Ia, DALR

phrase: RFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAF
type: DOMAIN
name: Cys-tRNA-synt_Ia_DALR
description: Cysteinyl-tRNA synthetase, class Ia, DALR

phrase: FKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGRYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQA
type: DOMAIN
name: tRNA-synt_1_cat_dom
description: tRNA synthetases class I, catalytic domain

phrase: KIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGRYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLNY
type: DOMAIN
name: tRNA-synt_1_cat_dom
description: tRNA synthetases class I, catalytic domain
Protein sequence:
MNNELLTLPQTELAALIESWGFPRFRAMQVYEWLHRHHCSTYDEMSNVPAAVRTQLAEAFPLDTFTLFDRQVSQDGTRKYVFKLNDERLVETVGMPTFNRDGSLDRLSVCISSQVGCPMACAFCATGREGFTRNLNAAELVQQVAYVQKDFDARVSNIVVMGQGEPFLNYDEVIRALRIMNSNDDLNIGARHITISTCGILKGINRLAEEPEQFTLAISLHSAVQATRDQLMPQGAQQTLPELKNALTHYIKRTNRRVSFEYLLIKGVNDSPRDLDALIEFCSGLLCHVNLLPMNPIEGSAYQPATAQTVSSWIDELSAHGIETSIRKSRGADIDGACGQLKNKLVSRETT

Annotated regions:
phrase: ELLTLPQTELAALIESWGFPRFRAMQVYEWLHRHHCSTYDEMSNVPAAVRTQLAE
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: SSQVGCPMACAFCATGREGFTRNLNAAELVQQVAYVQKDFDARVSNIVVMGQGEPFLNYDEVIRALRIMNSNDDLNIGARHITISTCGILKGINRLAEEPEQFTLAISLHSAVQATRDQLMPQGAQQTLPELKNALTHYIKRTNRRVSFEYLLIKGVNDS
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SLDRLSVCISSQVGCPMACAFCATGREGFTRNLNAAELVQQVAYVQKDFDARVSNIVVMGQGEPFLNYDEVIRALRIMNSNDDLNIGARHITISTCGILKGINRLAEEPEQFTLAISLHSAVQATRDQLMPQGAQQTLPELKNALTHYIKRTNRRVSFEYLLIKGVNDSPRDLDALIEFCSGLLCHVNLLPMNPIEGSAYQPATAQTVSSWIDELSAHGIETSIRKSRGA
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MLRSLWSGVNGMQAHQIALDIESNNIANVNTTGFKYSRASFVDMLSQVKLIATAPYKNGLAGQNDFSVGLGVGVDATTKIFSQGNIQNTDVKTDLAIQGDGFFIISPDRGITRNFTRDGEFLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVDNTGPLENIRIDPGMVMPARASNRISMRANLNAGRHADQTAAVFALDSSAKTPSDGINPVYDSGTNLAQVAEDMGSLYNEDGDALLLNENQGIWVSYKSAKMVKDILPSAENSTLELNGVKISFTNDSAVSRTSSLVAAKNAINAVKSQTGIEAYLDGKQLRLENTNELDGDEKLKNIVVTQAGTGAFANFLDGDKDVTAFKYSYTHSISPNADIGQFRTTEDLRALIQHDANIVKDPSLADNYQDSAASIGVTINQYGMFEINNKDNKNVIKENLNIFVSGYSSDSVTNNVLFKNAMKGLNTASLIEGGASASSSKFTHATHATSIDVIDSLGTKHAMRIEFYRSGGAEWNFRVIVPEPGELVGGSAARPNVFEGGRLHFNNDGSLAGMNPPLLQFDPKNGADAPQRINLAFGSSGSFDGLTSVDKISETYAIEQNGYQAGDLMDVRFDSDGVLLGAFSNGRTLALAQVALANFANDAGLQALGGNVFSQTGNSGQALIGAANTGRRGSISGSKLESSNVDLSRSLTNLIVVQRGFQANSKAVTTSDQILNTLLNLKQ

Annotated regions:
phrase: LESSNVDLSRSLTNLIVVQRGFQANSKAVTTSDQILNTLLN
type: DOMAIN
name: Flg_bb/hook_C_dom
description: Flagellar basal-body/hook protein, C-terminal domain

phrase: AIQGDGFFIISPDRGITRNFTRDGEFLFDSQGSLVTTGGLVVQGWVRNGSDTGNKGSDTDALKVD
type: DOMAIN
name: LlgE_F_G-like_D1
description: Flagellar hook protein FlgE/F/G-like, D1 domain

phrase: GVNGMQAHQIALDIESNNIANVNTTGF
type: DOMAIN
name: Flag_bb_rod_N
description: Flagellar basal body rod protein, N-terminal

phrase: KFTHATHATSIDVIDSLGTKHAMRIEFYRSGGAEWNFRVIVPEPGELVGGSAARPNVFEGGRLHFNNDGSLAGMNPPLLQFDPKNGADAPQRINLAFGSSGSFDGLTSVDKISETYAIEQNG
type: DOMAIN
name: FlgE_D2
description: Flagellar hook protein FlgE, D2 domain

phrase: TLELNGVKISFTNDSAVSRTSSLVAAKNAINAVKSQTGIEAYLDGKQLRLENT
type: CONSERVED_SITE
name: Flagellin_hook_IN_motif
description: Flagellin hook, IN motif
Protein sequence:
MKKAVVLLSGGLDSTTVLYLAKSQGYEVYAMSFDYGQRHKKEIQCARDVASGTGAADFVLVTTNMNAWGGSALTDNSIKVPEFNEESEKIPVTYVPARNMIFLSYAASYAETIGAYDIFIGVSEVDYSGYVDCRHEFIDSMEKTINLGTVCAVEHKKYIKIHAPFLYKTKSEEIKIGMDLGVKYEKTWTCYNGEEFACGICDSCRLRLEAFKEAGYKDPIKYKGEK

Annotated regions:
Protein sequence:
MKTKYIKQLFSAALIAVLSSGVTSCINDLDISPIDPQTGGSFDQQGVFVKGYAMLGVTGQKGIDGSPDLDGQDEGESGFYRTTFNCNELPTDECLWAWQENQDIPQLTSISWSPSSQRTEWVYVRLGYDITQYNFFLDQTEGMTDAETLRQRAEIRFLRALHYWYFLDLFGKAPFKEHFSNDLPVEKKGTELYTYIQNELNEIEADMYEPRQAPFGRADKAANWLLRARLYLNAGVYTGQTDYAKAEEYASKVIGSAYKLCTNYSELFMADNDENENAMQEIILPIRQDGVKTRNYGGSTYLVCGTRVAGMPRMGTTNGWSCIFARAAMVQKFFSNLEDVPMLPADVEIPTKGLDTDEQIDAFDAEHGIRTEDMIKAAGDDRALLYSGVGGGRRKIQTDAISGFTDGLSIVKWQNYRSDGKPVSHATYPDTDIPLFRLAEAYLTRAEAIFRQGGDATGDINELRKRANCTRKVQTVTEQELIDEWAREFYLEGRRRSDLVRFGMFTTNKYLWDWKGGAMNGTSVASYYNKYPIPVSDINNNRNMSQNEGYK

Annotated regions:
phrase: GVGGGRRKIQTDAISGFTDGLSIVKWQNYRSDGKPVSHATYPDTDIPLFRLAEAYLTRAEAIFRQGGDATGDINELRKRANCTRKVQTVTEQELIDEWAREFYLEGRRRSDLVRFGMFTTNKYLWDWKGGAMNGTSVASYYNKYPIPVSDINNNRNMSQNEG
type: DOMAIN
name: SusD_RagB_dom
description: RagB/SusD domain
Protein sequence:
MMAETLTPRQIVEKLDQFIVGQKEAKKAVAIALRNRYRRSLLDEKLRDEVMPKNILMIGPTGVGKTEIARRLAKLVGAPFIKVEATKFTEVGYVGRDVESMVRDLVETSVRLVKERKMNEVKDRAEQQANKRLVELLVPGKPKQTIKNPLELLFGGQGAQADNSYSHEDEQVEQKRRQVAWQLANGQLENEMVTIEIEEQTPLWFDFLQGAGIEQMGMNMQDALSSLMPKRRKKRRLKVSEARKVLINEEAQKLIDMDEVTQEAVRLAEQSGIIFIDEIDKIARSGAVSGSADVSREGVQRDILPIVEGSTVMTKYGPVKTDHILFIAAGAFHMAKPSDLIPELQGRFPIRVELAKLSVDDFVRILVEPNNALIKQYQALLATEGISLEFSDDAIRKIAEVAFEVNQTTDNIGARRLHTILEKLLEDLLFEAPDIGIDKVVITPQYVEQKLGSIVKNKDLSEFIL

Annotated regions:
phrase: MPKNILMIGPTGVGKTEIARRLAKLVGAPFIKVEATKFTEVGYVGRDVESMVRDLVETSVRLVKERKMNEVKDRAEQQANKRLVELLVPGKPKQTIKNPLELLFGGQGAQADNSYSHEDEQVEQKRRQVAWQLANGQLENEMVTIEIEEQTPLWFDFLQGAGIEQMGMNMQDALSSLMPKRRKKRRLKVSEARKVLINEEAQKLIDMDEVTQEAVRLAEQSGIIFIDEIDKIARSGAVSGSADVSREGVQRDILPIVEGSTVMTKYGPVKTDHILFIAAGAFHMAKPSDLIPELQGRFPIRVE
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LSVDDFVRILVEPNNALIKQYQALLATEGISLEFSDDAIRKIAEVAFEVNQTTDNIGARRLHTILEKLLEDLLFEAPDIGIDKVVITPQYVEQK
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal

phrase: MQDALSSLMPKRRKKRRLKVSEARKVLINEEAQKLIDMDEVTQEAVRLAEQSGIIFIDEIDKIARSGAVSGSADVSREGVQRDILPIVEGSTVMTKYGPVKTDHILFIAAGAFHMAKPSDLIPELQGRFPI
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: ILMIGPTGVGKTEIARRLAKLVGAPFIKVEATKFTEVGYVGRDVESMVRDL
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: LIKQYQALLATEGISLEFSDDAIRKIAEVAFEVNQTTDNIGARRLHTILEKLLEDLLFE
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal
Protein sequence:
MNNTAASPMSTATSSSGRSTGKSISFATELQSMMYSLGDARRPLHETAVLVEDVVHTQLINLLQQAAEVSQLRGARVITPEDLLFLMRKDKKKLRRLLKYMFIRDYKSKIVKGIDEDDLLEDKLSGSNNANKRQKIAQDFLNSIDQTGELLAMFEDDEIDEVKQERMERAERQTRIMDSAQYAEFCESRQLSFSKKASKFRDWLDCSSMEIKPNVVAMEILAYLAYETVAQLVDLALLVRQDMVTKAGDPFSHAISATFIQYHNSAESTAACGVEAHSDAIQPCHIREAIRRYSHRIGPLSPFTNAYRRNGMAFLAC

Annotated regions:
Protein sequence:
MLSPAKTPAGIRAEPLVSLENVGVLRNGRWLVRGVDFSVSRGEIVTLIGPNGSGKSTSAKAAIGVLKPDEGRVERKAGLKVGYVPQKLSIDWTLPLSVRRLMTLTGPLPERDMLSALESAGIAHMLDAEVQHLSGGEFQRALMARAIARKPDLLVLDEPVQGVDFSGEIVLYDLIKSIRNATGCGILLISHDLHVVMAETDTVICLNGHVCCRGTPESVSRSPEYVRLFGSRAAQTLAVYSHHHDHTHLPDGRVQHADGTVTDHCHPDDGHHAHEHGHAGHEHDHDHPDHAHPHAHEAGERHA

Annotated regions:
phrase: RGEIVTLIGPNGSGKSTSAKAAIGVLKPDEGRVERKAGLKVGYVPQKLSIDWTLPLSVRRLMTLTGPLPERDMLSALESAGIAHMLDAEVQHLSGGEFQRALMARAIARKPDLLVLDEPVQGVDFSGEIVLYDLIKSIRNATGCGILLISHDLHVVMAETDTVICLNG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: RGVDFSVSRGEIVTLIGPNGSGKSTSAKAAIGVLKPDEGRVERKAGLKVGYVPQKLSIDWTLPLSVRRLMTLTGPLPERDMLSALESAGIAHMLDAEVQHLSGGEFQRALMARAIARKPDLLVLDEP
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: VSLENVGVLRNGRWLVRGVDFSVSRGEIVTLIGPNGSGKSTSAKAAIGVLKPDEGRVERKAGLKVGYVPQKLSIDWTLPLSVRRLMTLTGPLPERDMLSALESAGIAHMLDAEVQHLSGGEFQRALMARAIARKPDLLVLDEPVQGVDFSGEIVLYDLIKSIRNATGCGILLISHDLHVVMAETDTVICLNGHVCCRGTPESVSRSPEYVRLFGS
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: LSGGEFQRALMARA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site
Protein sequence:
MSRLRIFADSNPTTPHFDSRDGEQIATELRKIGVTFERWHASQPVEPGASPEQVMAAYRADIDRISAERGFKTVDVVSIAPDNPKREEMRAKFLDEHFHKEDEVRFFVAGSGLFTLHVDAQVYEIECVKDDLIAVPDSTLHWFDMGPEPHFVAIRFFTEPDGWVGHFTGTEIAKQFPRYAPEKPPKAS

Annotated regions:
Protein sequence:
MNFYRDATWVLEDIEKEAAKERISGSMQTLVLKSCKRYKLKSNPKHIYAVLDSCWKYKPYLEKVMKKAHILEDIPKKKGKPLFSRLTLLLLCHDLLLSKQKRIQMGKHPIKDYVLKFKSPLHSEMVKLKLKLKVRELSELVLSEDISNDLPPVRWIRINPLKCHPNGETEPVLAELRKKFTLKVDKWSELVPGSIYYDEFIPNLFGIHPSDKITAHELYKHGKIIIQDRASCFPAHILNPGPSDIVIDSCSAPGNKTTHTASYIYPEPPKDNNTRIYAFEKDPERAKVLQKMIKIAGCSPNISVNVGDFTKLATPEKYKDVTCFIVDPSCSGSGIFGRKFFDSFNRRKIDDKDDDGGIVPDEQEEFIAKEELQTRLAKLSSFQFQMVKHAMSFPAAKKIVYSTCSIHAEENERVVIDLLLDKSVREWGWKVAPKREVIPSWPRRGKVEEFEEVFRDGVTYDPQQLAEGCIRALPKSDGGIGFFAVCFERD

Annotated regions:
phrase: EDISNDLPPVRWIRINPLKCHPNGETEPVLAELRKKFTLKVDKWSELVPGSIYYDEFIPNLFGIHPSDKITAHELYKHGKIIIQDRASCFPAHILNPGPSDIVIDSCSAPGNKTTHTASYIYPEPPKDNNTRIYAFEKDPERAKVLQKMIKIAGCSPNISVNVGDFTKLATPEKYKDVTCFIVDPSCSGSGIFGRKFFDSFNRRKIDDKDDDGGIVPDEQEEFIAKEELQTRLAKLSSFQFQMVKHAMSFPAAKKIVYSTCSIHAEENERVVIDLLLDKSVREWGWKVAPKREVIPSWPRRGKVEEFEEVFRDGVTYDPQQLAEGCIRALPKSDGGIGFFAVCFER
type: DOMAIN
name: MeTrfase_RsmB-F_NOP2_dom
description: SAM-dependent methyltransferase RsmB-F/NOP2-type domain

phrase: HILNPGPSDIVIDSCSAPGNKTTHTASYIYPEPPKDNNTRIYAFEKDPERAKVLQKMIKIAGCSPNISVNVGDFTKLATPEKYKDVTCFIVDPSCSGSGIFGR
type: DOMAIN
name: MeTrfase_RsmB-F_NOP2_cat
description: SAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic core

phrase: KHIYAVLDSCWKYKPYLEKVMKKAHILEDIPKKKGKPLFSRLTLLLLCHDLLLSKQKRIQMGKHPIKDYVLKFKSPLHSEMVKLKLKLKVRELSEL
type: DOMAIN
name: NSUN5_RCM1_N
description: NSUN5/RCM1, N-terminal domain