nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MHSESPIIRRQSTRIYVGDVPIGDGAPIAVQSMTNTLTTDVAATVAQIRALEKVGADIVRVSVPTMDAAEAFKLIKQQVNIPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRSVVECARDYNIPIRIGINGGSLEKEIQLKYGEPTPDALVESAMRHVDILDRLNFDQFKVSVKASDVFLAVESYRRLAKQIKQPLHLGITEAGGARAGSVKSAVGLGMLLAEGIGDTLRISLAADPVEEIKVGFDILKSLRIRSRGINFIACPTCSRQEFDVIGTVNELEQRLEDITTPMDVSIIGCVVNGPGEAEVSHLGVAGSSRKSAFYEDGIRQKERFDNDNVIDQLETKIRAKAAMLDVNNRINVQEVEK

Annotated regions:
Protein sequence:
MADSASESDTDAAGGGPAAMQSSCSATSGGSGGGGGGKSGGIVISPFRLEELTNRLASLQQENKVLKIELETYKLKCKALQEENRDLRKASVTIQARAEQEEEFISNTLFKKIQALQKEKETLAVNYEKEEEFLTNELSRKLMQLQHEKAELEQHLEQEQEFQVNKLMKKIKKLENDTISKQLTLEQLRREKIDLENTLEQEQEALVNRLWKRMDKLEAEKRILQEKLDQPVSAPPSPRDISMEIDSPENMMRHIRFLKNEVERLKKQLRAAQLQHSEKMAQYLEEERHMREENLRLQRKLQREMERREALCRQLSESESSLEMDDERYFNEMSAQGLRPRTVSSPIPYTPSPSSSRPISPGLSYASHTVGFTPPTSLTRAGMSYYNSPGLHVQHMGASHGITRPSPRRSSSPDKFKRPTPPPSPNTQSPVQPPPPPPPPPMQPAVPSAAPTQPAPTQPQHPVHPSSQP

Annotated regions:
Protein sequence:
MARVKRGVTSHARHKKVLELAKGYRGRSSTNYRIALERVEKALRYAYRDRRNKKRDFRALWIQRINAAVREHGLTYSRFINGLDKAGIEIDRKVLAAIAFDDSAAFGEIVKKAQAALG

Annotated regions:
phrase: KRDFRALWIQRINAAV
type: CONSERVED_SITE
name: RIBOSOMAL_L20_CS
description: Large ribosomal subunit protein bL20, conserved site
Protein sequence:
MSDIAERVKKIVVEHLGVEPEKVTEASNFIDDLGADSLDTVELVMAFEEEFNVEIPDDAAETIQTVGDAIKFLEKNSA

Annotated regions:
phrase: AERVKKIVVEHLGVEPEKVTEASNFIDDLGADSLDTVELVMAFEEEFNVEIPDDAAET
type: DOMAIN
name: PKS_PP-bd
description: Polyketide synthase-like, phosphopantetheine-binding domain

phrase: ERVKKIVVEHLGVEPEKVTEASNFIDDLGADSLDTVELVMAFEEEFNVEIPDDAAETIQTVGDAIKF
type: DOMAIN
name: PP-bd_ACP
description: Phosphopantetheine binding ACP domain

phrase: SDIAERVKKIVVEHLGVEPEKVTEASNFIDDLGADSLDTVELVMAFEEEFNVEIPDDAAETIQTVGDAIKFLEKN
type: DOMAIN
name: PP-bd_ACP
description: Phosphopantetheine binding ACP domain

phrase: DLGADSLDTVELVMA
type: PTM
name: Ppantetheine_attach_site
description: Phosphopantetheine attachment site
Protein sequence:
MVSQLTDAFARTFYYLRLSVTDVCNFRCTYCLPGGYRPDSHGAKRFLSCDEIRRISHAFAALGTEKVRLTGGEPTLRRDFCDIVAAVRENSAIRTLAVTTNGYRMARDVGAWRDAGLTAINVSVDSLDARQFHAITGEDRFAQVMAGIDAAFDAGFGRIKVNTVLMRGVNDGSLQAFLHWIRRRPIQMRFIELMETGDGSELFRRHHVSGATIRTQLLAAGWQRRLPGRSDGPAQVFWHPDYLGEVGLIMPYEKNFCASCNRLRVSAVGNLHLCLFGEQGIALRDLLQEDAQQAALQVRIAAALRHKREGHFLHQGDSGHTQNLSFIGG

Annotated regions:
phrase: YEKNFCASCNRLRVSAVGNLHLCLFGEQGIALRDLLQEDAQQAALQVRIAAALRHKREGHFLHQGDSGH
type: DOMAIN
name: MoaA_twitch
description: Molybdenum cofactor biosynthesis protein A-like, twitch domain

phrase: VTDVCNFRCTY
type: CONSERVED_SITE
name: MoaA_NifB_PqqE_Fe-S-bd_CS
description: MoaA/NifB/PqqE, iron-sulphur binding, conserved site

phrase: YYLRLSVTDVCNFRCTYCLPGGYRPDSHGAKRFLSCDEIRRISHAFAALGTEKVRLTGGEPTLRRDFCDIVAAVRENSAIRTLAVTTNGYRMARDVGAWRDAGLTAINVSVDSLDARQFHAITGEDRFAQVMAGIDAAFDAGFGRIKVNTVLMRGVNDGSLQAFLHWIRRRPIQMRFIELMETGDGSELFRRHHVSGATIRTQLLAAG
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: IQMRFIELMETGDGSELFRRHHVSGATIRTQLLAAGWQRRLPGRSDGPAQVFWHPDYLGEVGLIMPYEKNFCASCNRLRVSAVGNLHLCLFGEQGIALRDLLQEDAQQAALQVRIAAALRHKREGH
type: DOMAIN
name: MoaA_twitch
description: Molybdenum cofactor biosynthesis protein A-like, twitch domain

phrase: AFARTFYYLRLSVTDVCNFRCTYCLPGGYRPDSHGAKRFLSCDEIRRISHAFAALGTEKVRLTGGEPTLRRDFCDIVAAVRENSAIRTLAVTTNGYRMARDVGAWRDAGLTAINVSVDSLDARQFHAITGEDRFAQVMAGIDAAFDAGFGRIKVNTVLMRGVNDGSLQAFLHWIRRRPIQMRFIELMETGDGSELFRRHHVSGATIRTQLLAAGWQRRLPG
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SVTDVCNFRCTYCLPGGYRPDSHGAKRFLSCDEIRRISHAFAALGTEKVRLTGGEPTLRRDFCDIVAAVRENSAIRTLAVTTNGYRMARDVGAWRDAGLTAINVSVDSLDARQFHAITGEDRFAQVMAGIDAAFDAGFGRIKVNTVLMRGVNDGSLQAFLHW
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MATKTLKVTQTKSSIGRLPKHRATLTGLGLRRINHTVELEDTPAVRGMINKVYYMVKVED

Annotated regions:
phrase: LKVTQTKSSIGRLPKHRATLTGLGLRRINHTVELEDTPAVRGMINKVYYM
type: DOMAIN
name: Ribosomal_uL30_ferredoxin-like
description: Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain

phrase: TLTGLGLRRINHTVELEDTPAVRGMINKVYYM
type: CONSERVED_SITE
name: Ribosomal_uL30_CS
description: Large ribosomal subunit protein uL30, conserved site
Protein sequence:
LQWLILDHNLLENSKIKGKVFSKLKQLKKLHINHNNLTESVGPLPKSLEDLQLTHNKITKLGSFDGLLNLTFVHLQHNQLKEDAVSAAFKGLKSLEYLDLSFNQMSKLPSGLPASLLTLYLDNNKISDIPDEYFKRFNGLQYLRLSHNELADSGIPGNSFNISSLVELDLSYNKLKNIPTVNENLENYYLEV

Annotated regions:
phrase: SLVELDLSYNKLKNIPTVNEN
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: LLTLYLDNNKISDIPDEYFK
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LKSLEYLDLSFNQMSKLPSGLPA
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: ISSLVELDLSYNKLKNIPTVNE
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LLNLTFVHLQHNQLKEDAVSAAFK
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LKQLKKLHINHNNLTESVGPLPKSLED
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: SLLTLYLDNNKISDIPDEYFK
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: SLEDLQLTHNKITKLGSFDGL
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: SLLTLYLDNNKISDIPDEYFKRFNGLQYLRLSHNELADSGIPGNSFNISSLVELDLSYNK
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: SLEYLDLSFNQMSKLPSG
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: QLKKLHINHNNLTESVGPLPKS
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: SLEYLDLSFNQMSKLPSGLP
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat
Protein sequence:
MIKIKNLKKYYGKELVINDVSLEIKKGEIYAIVGHSGAGKSTLLRCINGLENYQEGSLKVFDQEIKDLSQKKSKELRMLRKDIGMIFQNFALMERKNVFENVAMPLRTHYTQCKFHAKLFNKEYMSEKEIAQKVNSLLEIVGLDHKNKSYPRELSGGQKQRVAIARALALNPKILLSDEATSALDPNTTKNILELISKINAEFGITVVLVTHEMDVVKDIAQKALLLEHGQIIGSGAIDELFLRPNAKMKEFLGESDFLPEHGLNIKLYFPKEVAQNSVITHMARTLNIDFNIVWGKIEKLNGKALGNLVININEKDKDKVLDYIEKSGVLWEVAS

Annotated regions:
phrase: HGLNIKLYFPKEVAQNSVITHMARTLNIDFNIVWGKIEKLNGKALGNLVININEKDKDKVLDYIEKSGVLWEV
type: DOMAIN
name: NIL_domain
description: NIL domain

phrase: NDVSLEIKKGEIYAIVGHSGAGKSTLLRCINGLENYQEGSLKVFDQEIKDLSQKKSKELRMLRKDIGMIFQNFALMERKNVFENVAMPLRTHYTQCKFHAKLFNKEYMSEKEIAQKVNSLLEIVGLDHKNKSYPRELSGGQKQRVAIARALALNPKILLSDEAT
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: IKIKNLKKYYGKELVINDVSLEIKKGEIYAIVGHSGAGKSTLLRCINGLENYQEGSLKVFDQEIKDLSQKKSKELRMLRKDIGMIFQNFALMERKNVFENVAMPLRTHYTQCKFHAKLFNKEYMSEKEIAQKVNSLLEIVGLDHKNKSYPRELSGGQKQRVAIARALALNPKILLSDEATSALDPNTTKNILELISKINAEFGITVVLVTHEMDVVKDIAQKALLLEHGQIIGSGAIDELFLRPNAKMKEFL
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: NIKLYFPKEVAQNSVITHMARTLNIDFNIVWGKIEKLNGKALGNLVININEKDKDKVLDYIEKSGVLWE
type: DOMAIN
name: NIL_domain
description: NIL domain

phrase: LSGGQKQRVAIARA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: KGEIYAIVGHSGAGKSTLLRCINGLENYQEGSLKVFDQEIKDLSQKKSKELRMLRKDIGMIFQNFALMERKNVFENVAMPLRTHYTQCKFHAKLFNKEYMSEKEIAQKVNSLLEIVGLDHKNKSYPRELSGGQKQRVAIARALALNPKILLSDEATSALDPNTTKNILELISKINAEFGITVVLVTHEMDVVKDIAQKALLLEHGQIIGSGAI
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain
Protein sequence:
MEPIWAVGLMTGTVLDGNIDVALIKTDGERIAEFGPYALAPYPDWIRRLLEETLAQARVWNFNGPEPAIFKEAEEALTRAQSAAVKELVEGFGLTMADIGVVGFHGQTVLHRAPQKGRLGDTRQLGDGELMHSILGTKVAYDFRSADVRAGGQGAPLAAAYHTALLRSAGTGDDTAILNLGGVANITWSDGEGNFVAFDTGPANAPLNDFIKSHGLGEMDRDGALGRAGKVDETRLAKLLEHPYLSAAYPKSLDRFDFGASMADGLSVEDGAATLSAFTASAVGKALDLLPRRPKKLVVSGGGRHNPTIMSMLETHAGVTPIGAEMFGWRGDAVEAECFAFLAVRVLRGLPISFPGTTGVPAPMRGGRLAE

Annotated regions:
Protein sequence:
MKLSRRDFMKANAVAAAAAAAGLTIPTVARAVTDAGSDGITWDKAPCRFCGTGCGVLVGTQNGRIVASQGDPDAPVNRGLNCIKGYFLPKIMYGKDRLTQPLLRMKGGQYDKEGEFTPVSWDQAFDVMAAKFKGTLKEKGPGAVGMFGSGQWTVWEGYAAAKLFKAGFRSNNLDPNARHCMASAVVGFMRTFGMDEPMGCYDDIEQADAFVLWGSNMAEMHPILWSRITNRRLSNDKVQVAVLSTFEQRSFELADNPIIFTPQSDLVILNYIANYIIQNNAVDQAFMDKHVNIRKGATDIGYGLRPTDPLEKAAKNPGSDASEPMSFDDYKAFVADYTLEKTAKMTGVPQDQLLALAKLYADPNIKVVSYWTMGFNQHTRGVWANNLCYNIHLLTGKISKPGCGPFSLTGQPSACGTAREVGTFAHRLPADMVVTNEKHRQIAETRWKIPAGTIPDKVGLHAVAQDRALKDGKLNAYWVMCNNNMQAGPNINADRMPGWRDPRNFIVVSDPYPTVSALSADLILPTAMWVEKEGAYGNAERRTQFWHQQVKAPGEAKSDLWQLMEFSKRFTVDEVWPAALLAKMPALQGKTLYEVLYVNGNVDRYPLDEVPADRLNDEARACGFYVQKGLFEEYAGFGRGHGHDLAPFDAYHKARGIRWPVVDGKETLWRYREGYDPFVKNGEEVRFYGKPDGKAVIFALPYEPPAESPDQEYDLWLSTGRVLEHWHTGSMTRRVPELHRAFPEAVLFIHPLDAKARGLRRGDKVKVMSRRGELVSIVETRGRNRVPQGLVYMPFFDAAQLVNVLTLDATDPLSKEADFKKCAVKIEKV

Annotated regions:
phrase: APCRFCGTGCGVLVGTQ
type: BINDING_SITE
name: MopterinOxRdtase_cofactor_BS
description: Molybdopterin oxidoreductase, molybdopterin cofactor binding site

phrase: LSRRDFMKANAVAAAAAAAGLTIPTVAR
type: CONSERVED_SITE
name: TAT_signal_bac_arc
description: Twin-arginine translocation pathway, signal sequence, bacterial/archaeal

phrase: ITWDKAPCRFCGTGCGVLVGTQNGRIVASQGDPDAPVNRGLNCIKGYFLPKIMY
type: DOMAIN
name: Mopterin_OxRdtase_4Fe-4S_dom
description: Molybdopterin oxidoreductase, 4Fe-4S domain

phrase: LWLSTGRVLEHWHTGSMTRRVPELHRAFPEAVLFIHPLDAKARGLRRGDKVKVMSRRGELVSIVETRGRNRVPQGLVYMPFFDAAQLVNVLTLDATDPLSKEADFKKC
type: DOMAIN
name: MoPterin_dinucl-bd_dom
description: Molybdopterin dinucleotide-binding domain

phrase: EYDLWLSTGRVLEHWHTGSMTRRVPELHRAFPEAVLFIHPLDAKARGLRRGDKVKVMSRRGELVSIVETRGRNRVPQGLVYMPFFDAAQLVNVLTLDATDPLSKEADFKKCAVKIEK
type: DOMAIN
name: CT_Nitrate-R-NapA-like
description: Nitrate reductase NapA-like, molybdopterin-binding domain

phrase: RLTQPLLRMKGGQYDKEGEFTPVSWDQAFDVMAAKFKGTLKEKGPGAVGMFGSGQWTVWEGYAAAKLFKAGFRSNNLDPNARHCMASAVVGFMRTFGMDEPMGCYDDIEQADAFVLWGSNMAEMHPILWSRITNRRLSNDKVQVAVLSTFEQRSFELADNPIIFTPQSDLVILNYIANYIIQNNAVDQAFMDKHVNIRKGATDIGYGLRPTDPLEKAAKNPGSDASEPMSFDDYKAFVADYTLEKTAKMTGVPQDQLLALAKLYADPNIKVVSYWTMGFNQHTRGVWANNLCYNIHLLTGKISKPGCGPFSLTGQPSACGTAREVGTFAHRLPADMVVTNEKHRQIAETRWKIPAGTIPDKVGLHAVAQDRALKDGKLNAYWVMCNNNMQAGPNINADRMPGWRDPRNFIVVSDPYPTVSALSADLILPTAMWVEKEGAYGNAERRTQFWHQQVKAPGEAKSDLWQLMEFSK
type: DOMAIN
name: Mopterin_OxRdtase
description: Molybdopterin oxidoreductase

phrase: ITWDKAPCRFCGTGCGVLVGTQNGRIVASQGDPDAPVNRGLNCIKGYFLPKIMYGK
type: DOMAIN
name: Mopterin_OxRdtase_4Fe-4S_dom
description: Molybdopterin oxidoreductase, 4Fe-4S domain

phrase: TWDKAPCRFCGTGCGVLVGTQNGRIVASQGDPDAPVNRGLNCIKGYFLPKIM
type: DOMAIN
name: Mopterin_OxRdtase_4Fe-4S_dom
description: Molybdopterin oxidoreductase, 4Fe-4S domain

phrase: MKLSRRDFMKANAVAAAAAAAGLTIPTVAR
type: CONSERVED_SITE
name: TAT_signal
description: Twin-arginine translocation pathway, signal sequence

phrase: KLSRRDFMKANAVAAAAAAA
type: CONSERVED_SITE
name: TAT_signal_bac_arc
description: Twin-arginine translocation pathway, signal sequence, bacterial/archaeal
Protein sequence:
MPRRRRIEPRKILPDPKFGSELLAKFINVLMVDGKKSIAESIVYGALETLSQRTGKEALEAFEIALENVRPTVEVKSRRVGGSTYQVPVEVRPTRRNALGMRWIVEAARKRGDKSMALRLANELSDASENKGAAVKKREDVHRMAEANKAFAHYRW

Annotated regions:
phrase: PRRRRIEPRKILPDPKFGSELLAKFINVLMVDGKKSIAESIVYGALETLSQRTGKEALEAFEIALENVRPTVEVKSRRVGGSTYQVPVEVRPTRRNALGMRWIVEAARKRGDKSMALRLANELSDASENKGAAVKKREDVHRMAEAN
type: DOMAIN
name: Ribosomal_uS7_dom
description: Small ribosomal subunit protein uS7 domain

phrase: SELLAKFINVLMVDGKKSIAESIVYG
type: CONSERVED_SITE
name: Ribosomal_uS7_CS
description: Small ribosomal subunit protein uS7, conserved site
Protein sequence:
MSKSDYYEALGVARNASDSEIKKAYRRMAMKYHPDRNPGDKEAEARFKEAKEAYEILSDPQKRAAYDQFGHAGVDPSAGMGGAGGPGGPGGPDFADIFSDVFGDIFGGGGRRGGGGRRVFRGADLRYNLELSLEDAVRGTEVQIRVPTQEVCDACDGKGTKEGSQPETCPTCKGHGDVRIQQGFFSVQQTCPRCGGSGSVITDPCRKCGGRGRVQSQKTLSVRVPAGVDTGDRIRLSGEGEPGENGGPPGDLYVQIMVREHEFFQRDGANLRCEVPISITKAALGGEVEVPTLDGRVNLRIPAGAQSGKVFRVRGKGVKPVRGGPQGDLLCRVHVETPVNLTKKQKELLEEFGRTMDDTGDKHTPRTSSWLDKARKFFEDWKL

Annotated regions:
phrase: DYYEALGVARNASDSEIKKAYRRMAMKYHPDRNPGDKEAEARFKEAKEAYEILSDPQKRAAY
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: FKEAKEAYEILSDPQKRAA
type: CONSERVED_SITE
name: DnaJ_domain_CS
description: DnaJ domain, conserved site

phrase: GTEVQIRVPTQEVCDACDGKGTKEGSQPETCPTCKGHGDVRIQQGFFSVQQTCPRCGGSGSVITDPCRKCGGRGRVQS
type: DOMAIN
name: HSP_DnaJ_Cys-rich_dom
description: Heat shock protein DnaJ, cysteine-rich domain

phrase: CDACDGKGTKEGSQPETCPTCKGHGDVRIQQGFFSVQQTCPRCGGSGSVITDPCRKCGGR
type: DOMAIN
name: HSP_DnaJ_Cys-rich_dom
description: Heat shock protein DnaJ, cysteine-rich domain

phrase: SDYYEALGVARNASDSEIKKAYRRMAMKYHPDRNPGDKEAEARFKEAKEAYEILSDPQ
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: CDACDGKGTKEGSQPETCPTCKGHGDVRIQQGFFSVQQTCPRCGGSGSVITDPCRKCGGR
type: DOMAIN
name: HSP_DnaJ_Cys-rich_dom
description: Heat shock protein DnaJ, cysteine-rich domain

phrase: LRYNLELSLEDAVRGTEVQIRVPTQEVCDACDGKGTKEGSQPETCPTCKGHGDVRIQQGFFSVQQTCPRCGGSGSVITDPCRKCGGRGRVQSQKTLSVRVPAGVDTGDRIRLSGEGEPGENGGPPGDLYVQIMVREHEFFQRDGANLRCEVPISITKAALGGEVEVPTLDGRVNLRIPAGAQSGKVFRVRGKGVKPVRGGPQGDLLCRVHVET
type: DOMAIN
name: DnaJ_C
description: Chaperone DnaJ, C-terminal

phrase: DYYEALGVARNASDSEIKKAYRRMAMKYHPDRNPGDKEAEARFKEAKEAYEILS
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: YEALGVARNASDSEIKKA
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: YRRMAMKYHPDRNPG
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: EAEARFKEAKEAYEILSDPQ
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: KRAAYDQFGHAGVDPSAGM
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: DYYEALGVARNASDSEIKKAYRRMAMKYHPDRNPGDKEAEARFKEAKEAYEILSDPQKRAAYDQF
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain
Protein sequence:
MIQAIVTDIEGTTTDIRFVQQVLFPYARERLTPFLREHQQDEEVANALLSLRREVEQPDADIETLITTLHSFMDEDRKSTALKAIQGIIWRSGYLQGDFRGHLYPDVTPQLADWQQQGLKLYVYSSGSVDAQKLLFGYSDAGDLQPLFSGYFDTHVGAKREVSAYQNIAHQLAIAPQALLFLSDIRQELDAAQLAGWQTCQLIRDLPDSESRHLQVSRFDEIDIEGFTA

Annotated regions:
Protein sequence:
MADGTYRFQQPGAGQFFFQTQPQQHSHQRHIARNGTNSPTGRLKFNHDTPSPSRSPPLSQAAALNPFNMYSQTHQGQHVMMNGGQAHQRFGMQIPKFQSQSHHPHHTQQPHHHTHHNQASHNINHQHNFSSGALASATPHFTPSHIQNGAHTNVDEDIDESMNEHWQQQLQLAAESRQASSPHYHARSVAQQAKGIQIAPSQPETQEQVPDGQNGVVKAKASSRQGWHALDFGGQGLRALSTSLFNYVFLEKLYLNHNKLKALPPTIGQLRKLNHLDLSGNDLTELPEEIGMLTNLKKLYLFDNNIRTLPYEMGYLYRLETLGVEGNPLNDVLKSHIMKEGTKALIKYLKEEMPVHLPPPDRDWIVLDETASSSNHRTDKVTVLSYNTLCDSSATQSHYGYAPARVLSWEFRRELILNELRSHDSDIICLQEIDQGSYNEYFREQLAYNDYKGVYWPRGRAMGMQEEDAKCVDGCATFFKASKFILLDKQLINFGQTAVRRPDAKGQDDIYNRLWQKDHIAVVVFLENRQTGSRFIVVNAHLYWDPAFKDVKLIQTAILMEELTKLSETYAKWPPCTDKAAFRFSKEEGQSETPPLEEPAPSMQYASGDQIPLLMCGDLNSSPGSAAYNLIAHGRLDEEHPDLEKRLYGNLSKVGMTHPFKLKSAYGAIGELPFTNYTPDFKDILDYIWYSSNSLHVSALLGEVDKDYLQRVPGFPNYHFPSDHIALLAEFTVKGKKGKVVEADFGPQRN

Annotated regions:
phrase: KLNHLDLSGNDLTELPEEIGM
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: LEKLYLNHNKLKALPPTIGQLRKLNHLDLSGNDLTELPEEIGMLTNLKKLYLFDNN
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: NLKKLYLFDNNIRTLPYEMGY
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: YVFLEKLYLNHNKLKALPPTIG
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LRKLNHLDLSGNDLTELPEEIG
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LTNLKKLYLFDNNIRTLPYEMGY
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LSYNTLCDSSATQSHYGYAPARVLSWEFRRELILNELRSHDSDIICLQEIDQGSYNEYFREQLAYNDYKGVYWPRGRAMGMQEEDAKCVDGCATFFKASKFILLDKQLINFGQTAVRRPDAKGQDDIYNRLWQKDHIAVVVFLENRQTGSRFIVVNAHLYWDPAFKDVKLIQTAILMEELTKLSETYAKWPPCTDKAAFRFSKEEGQSETPPLEEPAPSMQYASGDQIPLLMCGDLNSSPGSAAYNLIAHGRLDEEHPDLEKRLYGNLSKVGMTHPFKLKSAYGAIGELPFTNYTPDFKDILDYIWYSSNSLHVSALLGEVDKDYLQRVPGFPNYHFPSD
type: DOMAIN
name: Endo/exonuclease/phosphatase
description: Endonuclease/exonuclease/phosphatase
Protein sequence:
MSVTLDVRTPDGKTDGTVELPAEIFDVQANIALMHQVVVAQLAAGRQGTHATKTRGQVSGGGKKPYRQKGTGNARQGSIRAPQFTGGGTVHGPQPRDYSQRTPKKMKVAALRGALSDRVRAGQLHVVSHVVGGEQPSTKQARTAVRTWTEAKRVLVVLNKSEETSWLSLRNLQNVHLIDPSQLNTYDVLVNDDVVFTKAAFERFVAGPAKGKTAKAAATSGEAEEANQ

Annotated regions:
Protein sequence:
MKKIYIILLILFVILISLIGASILLVMSLSGENVDLFGGEKIAKVYLCNEIYFDYNQGDGIFPQQKKDARYYINLLDDLEKDDSVKGVLLVVNSPGGEVIASEKLARKVEELAKKKPVVVYVEGLDASGAYMVSAPADYIVAEKHSIVGSIGVRMDLMHYYGLMKKLGINVTTIKAGKYKDIGSPFRPMTKEEKEYLQKMINETYMDFVKWVAEHRHLSINYTLKIADGKIYSGEDAKKVGLVDEVGTEEDALKKLEQLANVSNPEIVEYGLEENKGLFGLTYYLGYGIGKGIGEVLYGMEKINGRVELLS

Annotated regions:
phrase: ELAKKKPVVVYVEGLDASGAYMVSAPADYIVAEKHSIVGSIGVRMDLMHYYGLMKKLGINVTTIKAGKYKDIGSPFRPMTKEEKEYLQKMINETYMDFVKWVAEHRHLSINYTLKIADGKIYSGEDAKKVGLVDEVGTEEDALKKLEQLAN
type: DOMAIN
name: Peptidase_S49
description: Peptidase S49

phrase: KDARYYINLLDDLEKDDSVKGVLLVVNSPGGEVIASEKLARKVEELAKKKPVVVYVEGLDASGAYMVSAPADYIVAEKHSIVGSIGVRMDLMHYYGLMKKLGINVTTIKAGKYKDIGSPFRPMTKEEKEYLQKMINETYMDFVKWVAEHRHLSINYTLKIADGKIYSGEDAKKVGLVDEVGTEEDALKKLEQL
type: DOMAIN
name: Pept_S49_SppA
description: Peptidase S49, SppA

phrase: IFPQQKKDARYYINLLDDLEKDDSVKGVLLVVNSPGGEVIASEKLARKVEELAKKKPVVVYVEGLDASGAYMVSAPADYIVAEKHSIVGSIGVRMDLMHYYGLMKKLGINVTTIKAGKYKDIGSPFRPMTKEEKEYLQKMINETYMDFVKWVAEHRHLSINYTLKIADGKIYSGEDAKKVGLVDEVGTEEDALKKL
type: DOMAIN
name: S49_SppA_C
description: Signal peptide peptidase A-like, C-terminal
Protein sequence:
MAINTDTSGKQKALTMVLNQIERSFGKGAIMRLGDATRMRVETISTGALTLDLALGGGLPKGRVIEIYGPESSGKTTVALHAIAEVQKEGGIAAFVDAEHALDPTYASALGVDIQNLLVSQPDTGESALEIVDQLVRSAAVDIVVIDSVAALVPRAEIEGDMGDAHVGLQARLMSQALRKITGNIGKSGCTVIFINQLRQKIGVTYGSPETTTGGNALKFYASVRLDIRRIQTLKKGTDEFGNRVKVKVAKNKVAPPFRIAEFDIIFGKGVSTLGCLVDLAEETGILLRKGAWYSYNGDNISQGRDNAIKYLEEKPEFAEQIKQQVREKLDKGAVVSANSVAKANEEDEEDVDLDEEE

Annotated regions:
phrase: GVTYGSPETTTGGNALKFYASVRLDIRRIQTLKKGTDEFGNRVKVKVAKNKVAPPFRIAEFDIIFGKGVSTLG
type: DOMAIN
name: RecA_monomer-monomer_interface
description: DNA recombination and repair protein RecA, monomer-monomer interface

phrase: RVETISTGALTLDLALGGGLPKGRVIEIYGPESSGKTTVALHAIAEVQKEGGIAAFVDAEHALDPTYASALGVDIQNLLVSQPDTGESALEIVDQLVRSAAVDIVVIDSVAALVPRAEIEGDMGDAHVGLQARLMSQALRKITGNIGKSGCTVIFINQ
type: DOMAIN
name: RecA_ATP-bd
description: DNA recombination and repair protein RecA-like, ATP-binding domain

phrase: KGRVIEIYGPESSGKTTVALHAIAEVQKEGGIAAFVDAEHALDPTYASALGVDIQNLLVSQPDTGESALEIVDQLVRSAAVDIVVIDSVAALVPRAEIEGDMGDAHVGLQARLMSQALRKITGNIGKSGCTVIFINQLRQKIGVTYGSPETTTGGNALKFYASVRLDIRRI
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: KALTMVLNQIERSFGKGAIMRLGDATRMRVETISTGALTLDLALGGGLPKGRVIEIYGPESSGKTTVALHAIAEVQKEGGIAAFVDAEHALDPTYASALGVDIQNLLVSQPDTGESALEIVDQLVRSAAVDIVVIDSVAALVPRAEIEGDMGDAHVGLQARLMSQALRKITGNIGKSGCTVIFINQLRQKIGVTYGSPETTTGGNALKFYASVRLDIRRIQTLKKGTDEFGNRVKVKVAKNKVAPPFRIAEFDIIFGKGV
type: DOMAIN
name: RecA-like_N
description: RecA-like, N-terminal

phrase: ALKFYASV
type: CONSERVED_SITE
name: DNA_recomb/repair_RecA_CS
description: DNA recombination/repair protein RecA, conserved site

phrase: GCLVDLAEETGILLRKGAWYSYNGDNISQGRDNAIKYLEEKPEFAEQIKQQVREK
type: DOMAIN
name: RecA-like_C
description: RecA-like, C-terminal
Protein sequence:
MHDVWRQATENLEKVMSESDFTTWIQPISYSHADDTTVFLTVPTLFFKEWIDEHYRQVLVGALSVTAGKKYFIELVVQEEDQNAEVPQAEDLIIKGHQEIEQPVTSQPETSSSSLNPKYTFELFVSGTGNQFAHAAAMAVANNPADTYNPLFIYGGVGLGKSHLLNAIGHTIRSSSPNLSVCYCSAEKFMYEMVNALRQKRMDQFRSRFRNLDVLLVDDIQFISGKVGTQEEFFHTFNALYDMQKQIVITSDKFPREISDLEERLRSRFEWGLIADIQPPDLETKIAILKKKSEITRIQLPEDVIYFLASSDTRNIRELEGMLIRLGAYSSLQGIPITLDMARENLKEIIGDRRKDITVELIQKVVAEQFGLKMADLKSSKRLKNFVQARQIAIWLCRDMTSFSYPDIGAKFGGKDHSTVIYAAKKIDLALKDDPKLSRIIEDIKLILLK

Annotated regions:
phrase: VELIQKVVAEQFGLKMADLKSSKRLKNFVQARQIAIWLCRDMTSFSYPDIGAKFGGKDHSTVIYAAKKIDLALKDDPKLSRIIEDIKLI
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: TYNPLFIYGGVGLGKSHLLNAIGHTIRSSSPNLSVCYCSAEKFMYEMVNALRQKRMDQFRSRFRNLDVLLVDDIQFISGKVGTQEEFFHTFNALYDMQKQIVITSDKFPREISDLEERLRSRFEWGLI
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LNPKYTFELFVSGTGNQFAHAAAMAVANNPADTYNPLFIYGGVGLGKSHLLNAIGHTIRSSSPNLSVCYCSAEKFMYEMVNALRQKRMDQFRSRFRNLDVLLVDDIQFISGKVGTQEEFFHTFNALYDMQKQIVITSDKFPREISDLEERLRSRFEWGLI
type: DOMAIN
name: DnaA_dom
description: Chromosomal replication initiator protein DnaA, ATPAse domain

phrase: IGAKFGGKDHSTVIYAAKK
type: CONSERVED_SITE
name: Chromosome_initiator_DnaA_CS
description: Chromosomal replication control, initiator DnaA, conserved site

phrase: VELIQKVVAEQFGLKMADLKSSKRLKNFVQARQIAIWLCRDMTSFSYPDIGAKFGGKDHSTVIYAAKK
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: DVWRQATENLEKVMSESDFTTWIQPISYSHADDTTVFLTVPTLFFKEWIDEHYRQV
type: DOMAIN
name: DnaA_N_dom
description: DnaA N-terminal domain

phrase: TVELIQKVVAEQFGLKMADLKSSKRLKNFVQARQIAIWLCRDMTSFSYPDIGAKFGGKDHSTVIYAAKK
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal
Protein sequence:
MKNLRQSSLEELQAVFKEWGEPAFRAKQVYEWIWKKFVGDISEMTNLSKSLREKLAEHYYIPKVKVHHAQYSNDGTIKSRLQLHDTHFIEGVLIPTDKRMTACVSSQVGCSLSCKFCATGYLPRKRNLDYDEIVDEVVLINEQAQKHYGKNLSNIVFMGMGEPLLNYKNVLKAIEKITSPDSLGMSPRRITVSTAGVAKMIRQLGDDQVKFKLALSLHAANDEKRNEIMPINESNNLAALVDALNHFYTMTGNEITFEYILFKDFNDSLRDADELIKLYRKVPADLVNIIEYNPIDAAAFEKPEEDVAERFMEYLESKKVNARLRRSRGKDIDAACGQLANVDHPTA

Annotated regions:
phrase: TDKRMTACVSSQVGCSLSCKFCATGYLPRKRNLDYDEIVDEVVLINEQAQKHYGKNLSNIVFMGMGEPLLNYKNVLKAIEKITSPDSLGMSPRRITVSTAGVAKMIRQLGDDQVKFKLALSLHAANDEKRNEIMPINESNNLAALVDALNHFYTMTGNEITFEYILFKDFNDSLRDADELIKLYRKVPADLVNIIEYNPIDAAAFEKPEEDVAERFMEYLESKKVNARLRRSRGK
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SSQVGCSLSCKFCATGYLPRKRNLDYDEIVDEVVLINEQAQKHYGKNLSNIVFMGMGEPLLNYKNVLKAIEKITSPDSLGMSPRRITVSTAGVAKMIRQLGDDQVKFKLALSLHAANDEKRNEIMPINESNNLAALVDALNHFYTMTGNEITFEYILFKDFND
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: MTACVSSQVGCSLSCKFCATGYLPRKRNLDYDEIVDEVVLINEQAQKHYGKNLSNIVFMGMGEPLLNYKNVLKAIEKITSPDSLGMSPRRITVSTAGVAKMIRQLGDDQVKFKLALSLHAANDEKRNEIMPINESNNLAALVDALNHFYTMTGNEITFEYILFKDFNDSLRDADELIKLYRKVPADLVNIIEYNPIDAAAFEKPEEDVAERFM
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: KNLRQSSLEELQAVFKEWGEPAFRAKQVYEWIWKKFVGDISEMTNLSKSLREKLAEHYYIPKVKVHHAQYSNDGTIKSRLQLHDTHFIEGVLIPTDKRMTACVSSQVGCSLSCKFCATGYLPRKRNLDYDEIVDEVVLINEQAQKHYGKNLSNIVFMGMGEPLLNYKNVLKAIEKITSPDSLGMSPRRITVSTAGVAKMIRQLGDDQVKFKLALSLHAANDEKRNEIMPINESNNLAALVDALNHFYTMTGNEITFEYILFKDFNDSLRDADELIKLYRKVPADLVNIIEYNPIDAAAFEKPEEDVAERFMEYLESKKVNARLRRSRGKDIDAACGQLA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: NLRQSSLEELQAVFKEWGEPAFRAKQVYEWIWKKFVGDISEMTNLSKSLREKLAEHYY
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MITLSTLKKYKKEGRKFSCLTCYDAMFAKMMQNAQVDTILIGDSLGMVVQGNDSTLPVTVEDIVYHTGNVSRSNKHALILADLPFMSYVTVEDAIANTRKVMQAGAQVIKLEGGAELSEMVTTLTKAGAPICVHLGLTPQSVNVFGGYKVQGKSDDAAAKLMSDVHAVVAAGASLILLECVPASLAKAVTEAVDVPVIGIGAGADTDGQVLVMHDMLGVTHGRTARFVHDFLTDERNQKSEYAGSVEGAFALFHNSVIEGSYPQAEHQFN

Annotated regions:
Protein sequence:
MALANGGEDRMDDSSSGRTSLADSASLTNSSLRSGTSSQSIHTNDGTIRVFNFPPASLTASSQYAVRGDLQYDVPPAGHCTNCPAALRDTGALDIATSLAAGAFGSDVVPARRATQLPAGLLLSDAVPVPDMDSQLELIDGRSHKFLYRQMRYDMRTQQIPGDSLSGAQGQVNGTSRDGHADRRSGTVGGSAGDALHREALQTVFATQPVARPQLLCGLQDPRGFSQSEGEFAECGAFEVALCASGLPPGAHLYDRTVYLHRSVSAQRGGGPRQRIHRHQSGPLDVVAVQFRFHQHSVHSHHQHKFRWTRRQWQEGQTTFHQRWNRCLCASLSTRLPGAGTQGGQGHLRGHTQVDPGWSRGGNFYDLQNQRHLGATGNRWPAQGLRDAVPDGEGDEVLHLLPGHLHQVLSRGHLHLQILIVFGCLELRRDALEMFSRGEEPNLVPIQTSQEDFLNRLQSGERLNRPASCPDFIYDLMQLCWHATPRSRPSFATIVDIITKEVATKVTHPTDGHQSPTNQPADAE

Annotated regions:
phrase: TTFHQRWNRCLCASLSTRLPGAGTQGGQGHLRGHTQVDPGWSRGGNFYDLQNQRHLGATGNRWPAQGLRDAVPDGEGDEVLHLLPGHLHQVLSRGHLHLQILIVFGCLELRRDALEMFSRGEEPNLVPIQTSQEDFLNRLQSGERLNRPASCPDFIYDLMQLCWHATPRSRPSFATIVDI
type: DOMAIN
name: Tyr_kinase_cat_dom
description: Tyrosine-protein kinase, catalytic domain

phrase: LEMFSRGEEPNLVPIQTSQEDFLNRLQSGERLNRPASCPDFIYDLMQLCWHATPRSRPSFATIV
type: DOMAIN
name: Ser-Thr/Tyr_kinase_cat_dom
description: Serine-threonine/tyrosine-protein kinase, catalytic domain