nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MMPDMIKDPFARLGLDREVLTVSQLNGRARVLLEDVFSSIWVEGEISNLSRPASGHVYFTLKDSGAQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFDALKAKLSDEGLFSAERKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTAVQGREAINQIVRALKLADSRGFDALILARGGGSLEDLWCFNEEAVARAIDACVTPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDNLHRRLVSRMQDRLMRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRALEQTMHQRQLRLAHMQSRLAAQHPGRTLAFLRQRLDALAERLPRAIREQIKARKLQLQSQVQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTQTGQRLTARLGEGELHVRVEDNHLTPVTLSLLD

Annotated regions:
phrase: LTVSQLNGRARVLLEDVFSSIWVEGEISNLSRPASGHVYFTLKDSGAQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDT
type: DOMAIN
name: OB-fold_nuc-bd_dom
description: OB-fold nucleic acid binding domain

phrase: SIWVEGEISNLSRPASGHVYFTLKDSGAQVRCALFRQSAARVRQALKDGLQVKVRGKVSLFEGRGDYQLILDTVEPA
type: DOMAIN
name: OB-fold_nuc-bd_dom
description: OB-fold nucleic acid binding domain

phrase: LFSAERKVALPLHPQRIGIISSPTGAVIRDIISVFRRRAPRVELTLIPTAVQGREAINQIVRALKLADSRGFDALILARGGGSLEDLWCFNEEAVARAIDACVTPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDSSDLHRRVDNLHRRLVSRMQDRLMRERLRLEGISRRLRHPGERLRQQSQRLDDLDMRLRRALEQTMHQRQLRLAHMQSRLAAQHPGRTLAFLRQRLDALAERLPRAIREQIKARKLQLQSQVQTLNVVSPLATLGRGYSILLDERGHAIRNAAQTQTGQRLTARLGEGELH
type: DOMAIN
name: Exonuc_VII_lsu_C
description: Exonuclease VII, large subunit, C-terminal
Protein sequence:
MTDQTTRLPVRRALISVSDKTGILEFARELQQLGVEILSTGGTYKLLKDNGVNAVEVADYTGFAEMMDGRVKTLHPKIHGGILGRRGVDDAIMNEHGIKPIDLVAVNLYPFEATIAKPGCDLPTAIENIDIGGPTMVRSAAKNHKDVAIVVNASDYASVLEGLKAGGLTYAQRFDLMLKAFEHTAAYDGMIANYMGTIDQAKDTLSTEARSEFPRTFNSQFVKAQEMRYGENPHQSAAFYVEAKKGEASVSTAIQLQGKELSFNNVADTDAALECVKSFVKPACVIVKHANPCGVAVVPEDEGGIRKAYDLAYATDTESAFGGIIAFNRELDGETAKAIVERQFVEVIIAPKISQAARDVVAAKQNVRLLECGEWPAERAAGWDFKRVNGGLLVQSRDNGMITAEDLKIVTKRAPTEQEIHDLVFAWKVAKFVKSNAIVYAKQRQTIGVGAGQMSRVNSARIAAIKAEHAGLQVQGAVMASDAFFPFRDGIDNAAKVGISAVIQPGGSMRDAEVIAAADEAGIAMVFTGMRHFRH

Annotated regions:
phrase: GILEFARELQQLGVEILSTGGTYKLLKDNGVNAVEVADYTGFAEMMDGRVKTLHPKIHGGILGRRGVDDAIMNEHGIKPIDLVAVNLYPFEATIAKPGCDLPTAIENIDIGGP
type: DOMAIN
name: MGS-like_dom
description: Methylglyoxal synthase-like domain

phrase: TRLPVRRALISVSDKTGILEFARELQQLGVEILSTGGTYKLLKDNGVNAVEVADYTGFAEMMDGRVKTLHPKIHGGILGRRGVDDAIMNEHGIKPIDLVAVNLYPFEATIAKPGCDLPTAIENIDIGGPTMVRSAAKNHKDVAIV
type: DOMAIN
name: MGS-like_dom
description: Methylglyoxal synthase-like domain

phrase: GILEFARELQQLGVEILSTGGTYKLLKDNGVNAVEVADYTGFAEMMDGRVKTLHPKIHGGILGRRGVDDAIMNEHGIKPIDLVAVNLYPFEATIAKPGCDLPTAIENIDIGGP
type: DOMAIN
name: MGS-like_dom
description: Methylglyoxal synthase-like domain
Protein sequence:
MPLVKRNIDPRHLCHTALPRGIKNELECVTNISLANIIRQLSSLSKYAEDIFGELFNEAHSFSFRVNSLQERVDRLSVSVTQLDPKEEELSLQDITMRKAFRSSTIQDQQLFDRKTLPIPLQETYDVCEQPPPLNILTPYRDDGKEGLKFYTNPSYFFDLWKEKMLQDTEDKRKEKRKQKQKNLDRPHEPEKVPRAPHDRRREWQKLAQGPELAEDDADLLHKHIEVANGPASHYETRPQTYVDHMDGSYSLSALPFSQMSELLTRAEERVLVRPHEPPPPPPMHGAGDAKPTPTCISSATGLIENRPQSPAAGRTPVFVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPPPPLPPPGIRPSSPVAVAALAHPPSGLHPAPSTAPGPHAPLMPPSPPSQVLPASEPKRHPSTLPVISDARSVLLEAIRKGIQLRKVEEQREQEAKHERIENDVATILSRRIAVEYSDSEDDSEFDEVDWLE

Annotated regions:
phrase: SDARSVLLEAIRKGIQLRKVEEQRE
type: DOMAIN
name: WH2_dom
description: WH2 domain

phrase: ARSVLLEAIRKGIQLRK
type: DOMAIN
name: WH2_dom
description: WH2 domain

phrase: ARSVLLEAIRKGIQLRK
type: DOMAIN
name: WH2_dom
description: WH2 domain
Protein sequence:
MTTLASSIEHKTKHLAAPFENDENPWMKKYCCQCKSCKMSVPVQPWLPRFFVFGILCPVFWLVNLLAWWFLQYWQPHELEFHDLQEDEYPGFYEYEAITKRTVIPIKEEVLQEIRVMQNFSDSNSEEYYESKDGMPSSFLNVNTEQVEDENDTLKKYRYAFLKKVAHDVLESHDLLRKTFRDWNLRSLLGLLIDSILIIFVVLLCKKSR

Annotated regions:
Protein sequence:
MWGGRKLSCSGNRFLGVVISRYRGTETASTRLITSAVYSENQFSWTPQTKPWVFSEYRIMWFKSYRMTFACLNRIKIYRYPWTRLYSTSRTTVDSSEVKTFLALAHRWWDEQGIYAPLHSMNDLRVPFIRDNLLKTVADHQPGKPLSGMKILDVGCGGGLLTEPLGRLGASVTGIDPVDENIKTAQHHKSFDPILDKRIEYRACSLEEIVEETTEAFDAVVASEVVEHVIDLETFIQCCCQVLKPGGSLFITTINKTQLSYALGIVFAEQIAGIVPKGTHTWEKFVSPEKLESILESNGLSVQSVAGMLYNPFSGYWHWSENTSLNYAAHAVKSGVQDHPVPDEFVFKGETEELRGQDSTNAGAQEELKK

Annotated regions:
Protein sequence:
MNGWVARGLARRAAALGLGLRVLLCFGLCLEIAPTPIQTWSPTQAPGPSAGSCPPTNFQCRSDGRCLPLIWRCDVDQDCPDGSDEEECGTEVPNGSPSPCDIMDDCPDHNKNLLNCGPQSCPEGELCCPLDGVCIPSTWLCDGHRDCSDYSDELGCGTKTHEEGRTMSTGTPVTLENVTYLSNATVTAIEDWDSVQSGNRNVYGIIAAVAVLSISLAAGILFALSRLCAQGCLAPLGLLVSMKGSLQPEKKTSVL

Annotated regions:
phrase: SCPEGELCCPLDGVCIPSTWLCDGHRDCSDYSDELGC
type: REPEAT
name: LDrepeatLR_classA_rpt
description: Low-density lipoprotein (LDL) receptor class A repeat

phrase: CPEGELCCPLDGVCIPSTWLCDGHRDCSDYSDELG
type: REPEAT
name: LDrepeatLR_classA_rpt
description: Low-density lipoprotein (LDL) receptor class A repeat

phrase: CLPLIWRCDVDQDCPDGSDEEE
type: CONSERVED_SITE
name: LDLR_class-A_CS
description: Low-density lipoprotein (LDL) receptor class A, conserved site

phrase: SCPPTNFQCRSDGRCLPLIWRCDVDQDCPDGSDEEECG
type: REPEAT
name: LDrepeatLR_classA_rpt
description: Low-density lipoprotein (LDL) receptor class A repeat

phrase: SCPEGELCCPLDGVCIPSTWLCDGHRDCSDYSDELGCG
type: REPEAT
name: LDrepeatLR_classA_rpt
description: Low-density lipoprotein (LDL) receptor class A repeat

phrase: CPPTNFQCRSDGRCLPLIWRCDVDQDCPDGSDEEE
type: REPEAT
name: LDrepeatLR_classA_rpt
description: Low-density lipoprotein (LDL) receptor class A repeat

phrase: GRCLPLIWRCDVDQDCPDGSD
type: REPEAT
name: LDrepeatLR_classA_rpt
description: Low-density lipoprotein (LDL) receptor class A repeat

phrase: GVCIPSTWLCDGHRDCSDYSD
type: REPEAT
name: LDrepeatLR_classA_rpt
description: Low-density lipoprotein (LDL) receptor class A repeat

phrase: CIPSTWLCDGHRDCSDYSDELG
type: CONSERVED_SITE
name: LDLR_class-A_CS
description: Low-density lipoprotein (LDL) receptor class A, conserved site

phrase: SCPEGELCCPLDGVCIPSTWLCDGHRDCSDYSDELG
type: REPEAT
name: LDrepeatLR_classA_rpt
description: Low-density lipoprotein (LDL) receptor class A repeat

phrase: SCPPTNFQCRSDGRCLPLIWRCDVDQDCPDGSDEEE
type: REPEAT
name: LDrepeatLR_classA_rpt
description: Low-density lipoprotein (LDL) receptor class A repeat

phrase: SCPPTNFQCRSDGRCLPLIWRCDVDQDCPDGSDEEEC
type: REPEAT
name: LDrepeatLR_classA_rpt
description: Low-density lipoprotein (LDL) receptor class A repeat
Protein sequence:
MSLNVELIKDKILSENYFVLRNITYDLTRKDGEVVRHKREVYDRGNGAAVLLYNREKKSVVLIRQFRVATWVNGNPDGMLIEACAGLLDDDEPEVCIRKEAIEETGYRVNAAEKVFELYTSPGGVTELIHLFIAEYDDASRANEGGGVEDEEIEVLEMPFSEALEKVRQGVIRDAKTVLLLQHLQLRGIMD

Annotated regions:
phrase: DRGNGAAVLLYNREKKSVVLIRQFRVATWVNGNPDGMLIEACAGLLDDDEPEVCIRKEAIEETGYRVNAAEKVFELYTSPGGVTELIHLFIAEYDDASRANEGGGVEDEEIEVLEMPFSEALEKVRQGVIRDAKTVL
type: DOMAIN
name: NUDIX_hydrolase_dom
description: NUDIX hydrolase domain

phrase: GNGAAVLLYNREKKSVVLIRQFRVATWVNGNPDGMLIEACAGLLDDDEPEVCIRKEAIEETGYRVNAAEKVFELYTSPGGVTELIHLFIAEYDDASRANEGGGVEDEEIEVLEMPFSEALEKVR
type: DOMAIN
name: NUDIX_hydrolase_dom
description: NUDIX hydrolase domain
Protein sequence:
MTKEKPAVFYNRIIDKGRLKKLMSWAYTSFGSAHCATMADELKTLGFRYATQAGVSISVDDLQVPPIKRQMLDSAEQEIKTTEARYSRGEITEVERFQKVIDTWNSTSESLKDEVVKNFRETNPLNSVYMMAFSGARGNLSQVRQLVGMRGLMADPQGEIIDLPIKTNFREGLTVTEYIISSYGARKGLVDTALRTADSGYLTRRLVDVSQDVIVREEDCGTARGLKLRAMTDGEREQISLEDRLFGRVLNADVVDPKTGEVIAQRNQDIDADLAKKIATTVAEVEVRSPLTCEAARSVCRKCYGWSLAHGHMVDMGEAVGIIAAQSIGEPGTQLTMRTFHTGGVFTKEAARTIKASKAGTIQFKDGLSTRRMRTPHGDEVEQVEVAGTLVLKPSDNGKMVSHALSPGSFVLVAEGASVKKGDLLVEVGAGQKTQKSTERATKDVSSDLAGEVLFDNLIAEEKTDRQGNTTRSAQRSGLMWVLAGDVYNLPAGAEPVVENGTHVNVGDILAETKLVSLSGGVVRLIPNSREIEIVTASVLLDEAKVLHETGGGSEQYIIETSKGDQFLLKTAPGTKVQNNANIAELIDDRYRTTTGGIIKYSGVEVAKGTKKQGYEVLKGGTLLWIPEETHEVNKDSSLRIVEDGQYVEAGTEVVKDIFSQSAGVAEVIEKNDILREVIIKPGELHLTEEAIADKYHEQLIQPGEEVIPGVTIDKLSYGEKVISTEGVALLVRPVEEFQVEDTPVEPSQGSINEQGAGRNIELHAVQRLFFKDGERVKSVDGVSLLSTQLIIEIGAIEGEDEDVLANLYADIELQDDPTDDEVKRLQLVILESLILRRDSDSDPFGGQVQTRLMVEDGQEIVPGAVVARTEIQCKEPGEVRGIRSGQEAIRRLLIVRDSDRQTLAIDGKAKVKENTLVVAGTEIAEGVVIEDSAQVLKVSDKEIVLRHARPYRVSGGAVLHIDEGDLVQRGDNLVLLVFERAKTGDIIQGLPRIEELLEARKPKEAAVLARRPGTCQVEYLDDETVDVKVIEDDGVISEYPVSLNQSVMVVDGQRVGPAEPLTDGLNNPHEILEIFFDYYAESKGIYEAALIGLRESQRFLVEEVQRVYQSQGIDISDKHIEVIVRQMTAKVRIDDGGDTTMLPGELIELRQVEQVNEAMSITGGAPARYTPVLLGITKASLNTDSFISAASFQETTRVLTEAAIEGKSDWLRGLKENVIIGRLIPAGTGFASQNDFVDEGTSRSPNGYSNVVTNDNGAGLSSRTYDDLDGSEILDDQTARAFTEGKSNRKDIISGDELISDDTPIPSDVQGKAPVIDDDAMIDDNWMKDQ

Annotated regions:
phrase: ALIGLRESQRFLVEEVQRVYQSQGIDISDKHIEVIVRQMTAKVRIDDGGDTTMLPGELIELRQVEQVNEAMSITGGAPARYTPVLLGITKASL
type: DOMAIN
name: RNA_pol_Rpb1_5
description: RNA polymerase Rpb1, domain 5

phrase: GLTVTEYIISSYGARKGLVDTALRTADSGYLTRRLVDVSQDVIVREEDCGTARGLKLRAMTDGEREQISLEDRLFGRVLNADVVDPKTGEVIAQRNQDIDADLAKKIATTVAEVEVRSPLTCEAARSVCRKCYGWSLAHGHMVDMGEAVGIIAAQSIGEPGTQLTMRTFHTGGVFTKEAARTIKASKAGTIQFKD
type: DOMAIN
name: RNA_pol_Rpb1_5
description: RNA polymerase Rpb1, domain 5

phrase: ITEVERFQKVIDTWNSTSESLKDEVVKNFRETNPLNSVYMMAFSGARGNLSQVRQLVGMRGLMADPQGEIIDLPIKTN
type: DOMAIN
name: RNA_pol_Rpb1_4
description: RNA polymerase Rpb1, domain 4
Protein sequence:
STRLMLHSKAQTSVLQLAAERGAVEDIELHEVMLTGFRDVRCVESGGPEPGVGCAGRGIITAINFLEENGAYTDVDFVSYDVLGDVVCGGFAMPIREGKAQEIYIVTS

Annotated regions:
phrase: ESGGPEPGVGCA
type: CONSERVED_SITE
name: NifH/chlL_CS
description: NifH/chlL conserved site

phrase: DVLGDVVCGGFAM
type: CONSERVED_SITE
name: NifH/chlL_CS
description: NifH/chlL conserved site
Protein sequence:
MSVTSTVEENHQKNPSTPAAVEEKKKRRWVFWDRRWRRLDYVKFSASFTVHSLALLAPFYFTWSALWVTFLFYTIGGLGITVSYHRNLAHRSFKVPKWLEYLLAYCALLAIQGDPIDWVSTHRYHHQFTDSERDPHSPKEGFWFSHLLWIYDSAYLVSKCGRRANVEDLKRQWFYRFLQKTVLFHILGLGFFLFYLGGMSFVTWGMGVGAALEVHVTCLINSLCHIWGTRTWKTNDTSRNVWWLSVFSFGESWHNNHHAFESSARQGLEWWQIDISWYIVRFFEIIGLATDVKVPTEAQRRRMAIVR

Annotated regions:
phrase: TWSALWVTFLFYTIGGLGITVSYHRNLAHRSFKVPKWLEYLLAYCALLAIQGDPIDWVSTHRYHHQFTDSERDPHSPKEGFWFSHLLWIYDSAYLVSKCGRRANVEDLKRQWFYRFLQKTVLFHILGLGFFLFYLGGMSFVTWGMGVGAALEVHVTCLINSLCHIWGTRTWKTNDTSRNVWWLSVFSFGESWHNNHHAFESSARQGLEWWQI
type: DOMAIN
name: FA_desaturase_dom
description: Fatty acid desaturase domain
Protein sequence:
MKSLQKGFTLIELMIVVAIIGILAAFAIPAYNDYIARSQAAEGVSLADGLKVRIAENLQDGECKGPDANTASGVVGNEDKGKYGLAKIDGEYDASKTEAGDPNGCKVEITYGQGTAGDKISKLITGKKLVLDQLVNGSFIAGDGTDLADKFIPNAVKAKK

Annotated regions:
phrase: LQKGFTLIELMIVVAIIGILAAF
type: PTM
name: N_methyl_site
description: Prokaryotic N-terminal methylation site

phrase: KGFTLIELMIVVAIIGILAA
type: PTM
name: N_methyl_site
description: Prokaryotic N-terminal methylation site

phrase: QKGFTLIELMIVVAIIGILAAFA
type: PTM
name: N_methyl_site
description: Prokaryotic N-terminal methylation site
Protein sequence:
MAEDKTKPSELDQGKYDADDNVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELREFRPEIPCIVVANKIDDINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLFNDAIRLAVSYKQNSQDFMDEIFQELENFSLEQEEEDVPDQEQSSSIETPSEEVASPHS

Annotated regions:
phrase: NVKIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILVDFWDTAGQERFQSMHASYYHKAHACIMVFDIQRKVTYRNLSTWYTELREFRPEIPCIVVANKIDDINVTQKSFNFAKKFSLPLYFVSAADGTNVVKLF
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain
Protein sequence:
MNLKRKWDVYSRLTRIDRPIGTLLLLWPCLMALMLAAGGMPDLKVLVIFIIGVVIMRACGCIINDYADRDLDSFVERTRSRPLASGEISTKEALILFVILGLSAFGLVLLLNGLVVKLSVVGIILTIIYPFTKRITNMPQMFLGIVWSWSIPMAYAAQTGEVPMEAWWLFAANWCWTVAYDTMYAMVDRDDDLKVGIKSTAILFGKYDRQIIGLFQLAALACFIAAGWSADRGLLYGLGILTFVGFSTYQQMLIFDRERAPCFKAFLNNNWAGLALFVGLGADYLI

Annotated regions:
phrase: NDYADRDLDSFVERTRSRPLAS
type: CONSERVED_SITE
name: UbiA_prenylTrfase_CS
description: UbiA prenyltransferase conserved site
Protein sequence:
MAGSSVTPTPLLKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPSKIINVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLCPSTPHFFNTLYDPYREGADFVRGYPFSMREGAATAVSHGLWLNIPDYDAPTQLVKPRERNTRYVDAVMTIPKGTLFPMCGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCIKVICDHLGLGVKTGLPYIWHSKASNPFVNLKKEYKGIYWQEEIIPFSQSATLPKDCTSVQQCYLELSKQVKEKLSTIDPYFTKLADAMVTWIEAWDELNPTGEGLAKLPSRTAPESRLH

Annotated regions:
Protein sequence:
MPGSTGQPDAGGAGTGTTAGDPGHPHPALAGAEDAAPRPPPEPDDAAAALRLALDQLSALGLGGARPGDEGMATRSADGATECGEDEPAPPDELEVAVAPPVTASVAPGGLPLLDPDVSPRPSPPDVFASFAPHPAALGPSTLLAEQLNVIGSRKKSVNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFIVTGRKEDVEMAKREILSAEHFSLIRATRSKAGGLSGATPGPPNLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQRTHTYIVTPGRDKEPVFAVTGMPENVDRAREEIEAHITLRTGAFTDSGPDSDFHANGTDVCLDLLGAAASLWAKAPHPGRRPPAATGGLRGDNALGAASTPEPFYVGSRGGPPLPDPSPSSPYGGSGNGGFTFGGDGPSAPTGTATPEDCDFGFDFLALDLTVPATATIWAPFERAAPLPAFSGCPAVNGAPAQPNTGTRRSSGGGAATTPRHSPTLPEPGGLSLELPLARRSVPDPVGAVPWRPPQSALPPFSGSTTFSTTPSLPSTTLASSTLDTVPSEGNHKPSTTAANSSASTAAPGPPSAALARECVVCSEGEAMAALVPCGHNLFCMDCAVRICGKSEPECPACRTPATQAIHIFS

Annotated regions:
phrase: TIQVRVPYRVVGLVVGPKGATIKRIQQRTHTYIVTPGRDKEPVFAVTGMPENVDRAREEI
type: DOMAIN
name: KH_dom_type_1
description: K Homology domain, type 1

phrase: ECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFIVTGRKEDVEMAKREI
type: DOMAIN
name: KH_dom_type_1
description: K Homology domain, type 1

phrase: CVVCSEGEAMAALVPCGHNLFCMDCAVRICGKSEPECPAC
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: PGQTTIQVRVPYRVVGLVVGPKGATIKRIQQRTHTYIVTPGRDKEPVFAVTGMPENVDRAREEIEAHITLR
type: DOMAIN
name: KH-I_MEX3_rpt2
description: RNA-binding protein MEX-3, second type I KH domain

phrase: MTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFIVTGRKEDVEMAKREILSAEHFSLI
type: DOMAIN
name: KH-I_MEX3_rpt1
description: RNA-binding protein MEX-3, first type I KH domain

phrase: GQTTIQVRVPYRVVGLVVGPKGATIKRIQQRTHTYIVTPGRDKEPVFAVTGMPENVDRAREEIEAHI
type: DOMAIN
name: KH_dom
description: K Homology domain

phrase: VNMTECVPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFIVTGRKEDVEMAKREILSAE
type: DOMAIN
name: KH_dom
description: K Homology domain
Protein sequence:
MSFNIETTQGLERRVNITVPSEAVEQAVREELKRVAKNARIDGFRKGKVPAQMIEKRFGASVRQDVLGDLLQKHFFNVMLENKVNLAGRPEFTVEQFEAGKELKFTATFEVYPEVQLQGLDKIKVEKPVVEISDADIDKMLDILRKQQATWIETQDVAKADDRVTIDFVGSVDGEEFEGGKSTDFVLAMGQGRMIPGFEEGIIGHKAGEQFEINVTFPETYHAENLKGKAAKFSITLKKVEVMQLPELTDEFVAKFGPNTKNVADLRNEIAKNMQRELKNALVSRIKTQVIDGLLEQNPIEVPTAAVEQEIEVLRNQAAQRFGGNAQQAAQLPRELFEEQAKRRVQVGLLFSEVISSNELKADEERVKAMIADIASAYEQPAEVIEYYSKNKELMNNIRNVVLEQQAVDAVLTKAQVTEKASSFDEVMNPQA

Annotated regions:
phrase: VADLRNEIAKNMQRELKNALVSRIKTQVIDGLLEQNPIEVPTAAVEQEIEVLRNQAAQRFGGNAQQAAQLPRELFEEQAKRRVQVGLLFSEVISSNELKADEERVKAMIADIASAYEQPAEVIEYYSKNKELMNNIRNVVLEQQAVDAV
type: DOMAIN
name: Trigger_fac_C
description: Trigger factor, C-terminal

phrase: DDRVTIDFVGSVDGEEFEGGKSTDFVLAMGQGRMIPGFEEGIIGHKAGEQFEINVTFPETYHAENLKGKAAKFSITLKKVEVMQL
type: DOMAIN
name: PPIase_FKBP_dom
description: FKBP-type peptidyl-prolyl cis-trans isomerase domain

phrase: MSFNIETTQGLERRVNITVPSEAVEQAVREELKRVAKNARIDGFRKGKVPAQMIEKRFGASVRQDVLGDLLQKHFFNVMLENKVNLAGRPEFTVEQFEAGKELKFTATFEVYPEVQLQGLDKIKVEKPVVEISDADIDKMLD
type: DOMAIN
name: Trigger_fac_ribosome-bd_bac
description: Trigger factor, ribosome-binding, bacterial

phrase: AKADDRVTIDFVGSVDGEEFEGGKSTDFVLAMGQGRMIPGFEEGIIGHKAGEQFEINVTFPETYHAENLKGKAAKFSITL
type: DOMAIN
name: PPIase_FKBP_dom
description: FKBP-type peptidyl-prolyl cis-trans isomerase domain
Protein sequence:
MDIKTVRETAFAMPLTSPAYPPGPYRFIHREFFIITYRTDPAKLRAMVPEPLEVPEPLVAYEFIRMADSTGFGDYTESGQVIPVTYEGKPGTYTLAMYLDDHPPLAGGREMWGFPKKLASPKLVTDKDTLIGTLDYGPVRVATGTMGYKHRELDLAEQKRRLERPNFLLKIIPHVDGKTARICELSRNLMIDIDMKGAWTGPASLELAHHALAPVAELPVLEIVEARHIIADLTLGMGEVVFDYLAQ

Annotated regions:
Protein sequence:
MTDQTTTRRVLLKLSGESFGGGQMGVDPDVVSALAREIAEAAKTVEVAIVVGGGNFFRGAQLSQRGMDRGRADYMGMLGTVMNALALQDFLEQAGAATRVQSAISMTQVAEPYIPRRAVRHLEKGRIVIFGAGAGLPYFSTDTVAAQRALEIQAVEVLVAKNGVDGVYTGDPRTDPSATLLDTVTYQDALQRGLKVVDSTAFSLCMDNDMKMVVFGMEPGGNVTRAIRGERIGTIVSN

Annotated regions:
phrase: RVLLKLSGESFGGGQMGVDPDVVSALAREIAEAAKTVEVAIVVGGGNFFRGAQLSQRGMDRGRADYMGMLGTVMNALALQDFLEQAGAATRVQSAISMTQVAEPYIPRRAVRHLEKGRIVIFGAGAGLPYFSTDTVAAQRALEIQAVEVLVAKNGVDGVYTGDPRTDPSATLLDTVTYQDALQRGLKVVDSTAFSLCMDNDMKMVV
type: DOMAIN
name: Asp/Glu/Uridylate_kinase
description: Aspartate/glutamate/uridylate kinase
Protein sequence:
MKATVKGRYEGDKATAAATLAFTPSAADLRFKASATDAAFARGPSLEGLILTLEKPGSFLLDLKPHSKDVRFQFMNSALLLDRRVSLTYTHSTTLSPGPAKLPARTALDGSLTFDPANKLSLSHTLGSSGCRVKYSYAHGQDRLTTIEPCFDTANNAWDFAVTRKFQGGDAIKATYQASTKLLALDWTRDSKIGASFKVAASFDLSDQSKAPKLIAESTWNYEI

Annotated regions:
Protein sequence:
MTINLILLSLLAYVIGSIPSGLWIGKIFYKKDIRDFGSGNLGATNSFRVLGVKAGSIVTVMDILKGTVATLLPFFFQLNVNHHFWLLTGAFAIIGHSFPLFAGFRGGKAVATSAGVILAYAPLLFVAALVVFLLTLKISKYVSLSSMIGALAALIISFFMGDWILIILVACIALFVIWRHRANITRIRNGEEPKIKWM

Annotated regions:
Protein sequence:
MASQRFVIALHSFPGKSSDELPLVEGRKYLLIKMDEEFGDGWWEGEDEQGNRGIFPASHVELISDERSDSSDSRRGKEDFSISTAEVTRSSLSSSRSTSSRSDKDSEKLYSNNSLSSSHSSILNGPLDSLSKPSVPSNFNSMFPSSKQEGPSPLLDNQPSSDLSNFNTIDADYNNASASTSAPATSASLKKVLSAEDSVRETITDIETALQNMSTSASRTPNDSSPLPYIENRPASSLAVSEKIQNVPNWSTEEVVEWLMNAGLGSVAPNFAENEITGEILLGLDSNVLKELNITSFGKRFEVLRKIQQLKDSYEQSLYEEYPQFAEPISVSQSSDSSSSIPKKSNDEAGGSPSKSSPTRPGFNDYVNRPTSVMPSLSNMIVSPDLDSSPSTDWNQYVIPPLATPSSRNSKSTQSAVPENVSRFDSNEPSATSPILKRSSPTDSISQNSGLPSRLTEPISSPSTSSIDVDKEGTSFPGLPYHSSKGNLYAPQPSSNVPTKFTGGASESSSVPPRPIPSAMKGKAPASAISIEALEELDPPKITTIDGESPSSISSRLPSSNLEQGSSSSVTKSPESMPDPSAKASSPVTSKGVSINEKSAVNNYATPLSKPQPKDTKGSKLGNTFVAPSPAASLPASPPVGTELKTRPTLRSVASSPLNKEPIGKRKSKRDIFGRQKVLPTGISEGLSNIPAKEAIKTADCHGWMRKRSDRYGVWKSRYFVLKGTRLSYYHSLNDASEKGLIDMTSHRVTKTDDIVLSGGKTAIKLIP

Annotated regions:
phrase: ASQRFVIALHSFPGKSSDELPLVEGRKYLLIKMDEEFGDGWWEGEDEQGNRGIFPASHVELIS
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: VPNWSTEEVVEWLMNAGLGSVAPNFAENEITGEILLGLDSNVLKELNITSFGKRFEVLRKIQQLKD
type: DOMAIN
name: SAM
description: Sterile alpha motif domain

phrase: CHGWMRKRSDRYGVWKSRYFVLKGTRLSYYHSLNDASEKGLIDMTSHRVTKTD
type: DOMAIN
name: PH_domain
description: Pleckstrin homology domain

phrase: TADCHGWMRKRSDRYGVWKSRYFVLKGTRLSYYHSLNDASEKGLIDMTSHRVTKTDDIVLSGGKTAIKLI
type: DOMAIN
name: PH_domain
description: Pleckstrin homology domain

phrase: IALHSFPGKSSDELPLVEGRKYLLIKMDEEFGDGWWEGEDEQGNRGIFP
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: WSTEEVVEWLMNAGLGSVAPNFAENEITGEILLGLDSNVLKELNITSFGKRFEVLRKIQQLKD
type: DOMAIN
name: SAM
description: Sterile alpha motif domain

phrase: VPNWSTEEVVEWLMNAGLGSVAPNFAENEITGEILLGLDSNVLKELNITSFGKRFEVLRKIQQL
type: DOMAIN
name: SAM
description: Sterile alpha motif domain

phrase: RFVIALHSFPGKSSDELPLVEGRKYLLIKMDEEFGDGWWEGEDEQGNRGIFPASHVELI
type: DOMAIN
name: SH3_domain
description: SH3 domain
Protein sequence:
MRAVLQRVTRATCTVEGRVTGATGPGLLILLGVAPEDTPETAWRLAAKIVKLRVFADETGRMNRSVQDIGGGILSISQFTLYADTRRGNRPGFSGAAAPEHARALYAEFNAALRAQGVAVGEGVFGAHMMLDLTNDGPVTLFLDTAES

Annotated regions:
Protein sequence:
MGGKWSKSSVIGWPAVRERMRRTDPTARRNEPAAAGVGAVSRDLERHGAITSSNTAQNNPDCAWLEAQEEDEEVGFPVTPQVPLRPMTYSAARDLSFFLKDKGGLDGLIWSQQRQDILDLWVYHTQGFFPDWQNYTPGPGVRYPLTFGWLYELVPVEPEEVEENTAAENNCLLHPMNQHGMDDPEREVLKWRFNSLLAFEHMARIKHPEYYKDC

Annotated regions:
Protein sequence:
MSLAKAKELDSKYPTYKQEFAMPTFASLGITNPDFDPYTESIYLCGNSLGLMPKCTRKAITDELDAWAARGVESHFNHPDKSLTSWVDIDIPVVPLMAPVVGAKDNEVAVMGSLTANLNALLIHFYKPKGTRTKVLFEKQAFPSDYYAFINLVKLHGFDESHLIQVEVKPGETYLKTEDIKQVIDKYQDELALVCFPGIQYYTGQFFDMEEITNYAKSKSEDIRVGWDLAHAVGNVPLKLHDWNVDFAAWCSYKYLNSGPGGMAGIFVHERYTQGNSKTDFNPRLAGWWGNNPEDRFLMLEEYDPINSALSYRQSNPSVIDTVAVRSSLEVFKKVGGVEKLREKSLELTQFLQDLLTESKFYTPQSDQDSSKFGFKILTPLNPEERGCQLSICFQPHIDDKAKNVMERVHAYLHDHAIICDERRPDVIRLAPLPLYNNFEETYLATRRLFEILEKISSDY

Annotated regions:
Protein sequence:
MIGLIGRKVGMTRVFTEEGVSIPVTVVEVEANRIAQVKTLETDGYAAIQVTAGTKKANRVNKAEAGHFAKAGVEAGRGLWEFRLENGEEFAVGSELTVELFNEVKKVDVTGTSKGKGFQGTVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVDAERNLLLIKGAVPGATGGNVIVKPAVKA

Annotated regions:
phrase: FNEVKKVDVTGTSKGKGFQGTVK
type: CONSERVED_SITE
name: Ribosomal_uL3_CS
description: Large ribosomal subunit protein uL3, conserved site
Protein sequence:
MQGKRILLGVTGGIAAYKSAELARRLCEVGAEVRVVMTKNAEAFISSLTMQAVSGNAVRSETFDEEAEAGMSHIELARWADAIVVAPATAAFVARLTHGFADDLLTTLCLATESKIAIAPAMNRVMWSSPATQININRLQERTVTVMGPDSGDQACGEVGPGRMLQPEEIVRQVSELFSSDALNGLRVLVTAGSTWEAIDPVRGITNLSSGKMGYAIADAAVHAGADVTLVSGPATQPLPIRVASVIKVTSAREMLEAVMAHLDGQDIFIAVAAVADYRPQTQAASKIKKQGEEVLKMEFVRNPDILAKVKEKVPDLFSVGFAAETDNLISEARKKLLAKRADLIAANVVGGDSNALGSDYNTLQLIDRTGVVALGPALKTRIAVDLIQEISSRFHARGTLQSTR

Annotated regions:
phrase: KRILLGVTGGIAAYKSAELARRLCEVGAEVRVVMTKNAEAFISSLTMQAVSGNAVRSETFDEEAEAGMSHIELARWADAIVVAPATAAFVARLTHGFADDLLTTLCLATESKIAIAPAMNRVMWSSPATQININRLQERTVTVMGPDSGDQACGEVGPGRMLQPEEIVRQVS
type: DOMAIN
name: Flavoprotein
description: Flavoprotein

phrase: LNGLRVLVTAGSTWEAIDPVRGITNLSSGKMGYAIADAAVHAGADVTLVSGPATQPLPIRVASVIKVTSAREMLEAVMAHLDGQDIFIAVAAVADYRPQTQAASKIKKQGEEVLKMEFVRNPDILAKVKEKVPDLFSVGFAAETDNLISEARKKLLAKRADLIAANVVGGDSNALGSDYNTLQ
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal
Protein sequence:
MTNSTPIRSTHFDAIVIGSGPGGEGAAMGLTKANLNVAIIEREPSVGGGCTHWGTIPSKALRHAVSRIIEFNSNPLYCKNNTSLHSTFSDILGHAKSVIDKQTRMRQGFYDRNQCSLIFGEASFVEKNTVAVTAKDGSIETYTADKFIIATGSRPYRPEGINFNHSRVYDSDSILSLKHDPRHIIIYGAGVIGSEYASIFRGLGVKVDLVNTRDRLLSFLDNEMSDALSYHFWNSGIVTRNDENFEHIEANDDGVIMHLESGKKMKADCILFANGRTGNTDKLNLSAVGLEADSRGQLKVNDNYQTDVEHIYAVGDVIGYPSLASAAYDQGRFTAQAITKGKAEARLIDHIPTGIYTIPEISSVGKTEQELTAAKVPYEVGRSSFKHLARAQIAGKDIGSLKILFHRETKEILGIHCFGERAAEIIHIGQAIMEQKGEANTIEYFVNTTFNYPTMAEAYRVAALNGLNRLF

Annotated regions:
phrase: IPTGIYTIPEISSVGKTEQELTAAKVPYEVGRSSFKHLARAQIAGKDIGSLKILFHRETKEILGIHCFGERAAEIIHIGQAIMEQKGEANTIEYFVNTTFNYPTMAEAYRV
type: DOMAIN
name: Pyr_nucl-diS_OxRdtase_dimer
description: Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain

phrase: DAIVIGSGPGGEGAAMGLTKANLNVAIIEREPSVGGGCTHWGTIPSKALRHAVSRIIEFNSNPLYCKNNTSLHSTFSDILGHAKSVIDKQTRMRQGFYDRNQCSLIFGEASFVEKNTVAVTAKDGSIETYTADKFIIATGSRPYRPEGINFNHSRVYDSDSILSLKHDPRHIIIYGAGVIGSEYASIFRGLGVKVDLVNTRDRLLSFLDNEMSDALSYHFWNSGIVTRNDENFEHIEANDDGVIMHLESGKKMKADCILFANGRTGNTDKLNLSAVGLEADSRGQLKVNDNYQTDVEHIYAVGDVIGYPSLASAAYDQ
type: DOMAIN
name: FAD/NAD-binding_dom
description: FAD/NAD(P)-binding domain
Protein sequence:
MTSLNSKKILLGITGGIAAYKSAELVRRLSGQGAEVRVVMTEAAQKFITPLTMQALSGNPVSAELLDPAAEAGMGHIELAKWADLILIAPATASFMSKLAVGDASDLLMTLCLATVAPIVIAPAMNQAMWSNVATQANLSTLKNRNVAVLGPASGGQACGDVGFGRMLEPEDIVDGLSSLWAPGALSGKKVVITAGPTREAIDPVRYISNHSSGKMGYALAQAAVEAGASVVLVSGPVSLEVDPNVRLVSVVSALQMHEQAVAEAAGADMFIGAAAVADFRPVDVAAEKIKKGSSDSMSISMVKNPDIIASVAALVSRPFTVGFAAETQNVTQYAKDKLARKGLDMIIANDVSNARIGFNSDSNAVTVIDAQQSQNFDERSKQQLARDLVAYIAQVMARCS

Annotated regions:
phrase: KKILLGITGGIAAYKSAELVRRLSGQGAEVRVVMTEAAQKFITPLTMQALSGNPVSAELLDPAAEAGMGHIELAKWADLILIAPATASFMSKLAVGDASDLLMTLCLATVAPIVIAPAMNQAMWSNVATQANLSTLKNRNVAVLGPASGGQACGDVGFGRMLEPEDIVD
type: DOMAIN
name: Flavoprotein
description: Flavoprotein

phrase: LSGKKVVITAGPTREAIDPVRYISNHSSGKMGYALAQAAVEAGASVVLVSGPVSLEVDPNVRLVSVVSALQMHEQAVAEAAGADMFIGAAAVADFRPVDVAAEKIKKGSSDSMSISMVKNPDIIASVAALVSRPFTVGFAAETQNVTQYAKDKLARKGLDMIIANDVSNARIGFNSDSNAVTV
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal
Protein sequence:
MAKYTGPKLKQARREGTDLFLKSGVRPIDSKCKIEQVPGQHGAGARRARMSDYALQLREKQKLRRMYGVLERQFRRYYKEAARRKGSTGENLLKLLESRLDNVVYRMGFGSTRAEARQLINHKGVLVNGQGINIPSYQVRAEDVVAVREKAKRQDRIKFALELAQARAEAEWIEINAGKLEGVFKRVPERSELAPDIQENLVVELYSK

Annotated regions:
phrase: LESRLDNVVYRMGFGSTRAEARQL
type: CONSERVED_SITE
name: Ribosomal_uS4_CS
description: Small ribosomal subunit protein uS4, conserved site

phrase: KYTGPKLKQARREGTDLFLKSGVRPIDSKCKIEQVPGQHGAGARRARMSDYALQLREKQKLRRMYGVLERQFRRYYKEAARRKGSTGENLLKLL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: RLDNVVYRMGFGSTRAEARQLINHKGVLVNGQGINIPSYQVRAEDV
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: KYTGPKLKQARREGTDLFLKSGVRPIDSKCKIEQVPGQHGAGARRARMSDYALQLREKQKLRRMYGVLERQFRRYYKEAARRKGSTGENLLKLL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: SRLDNVVYRMGFGSTRAEARQLINHKGVLVNGQGINIPSYQVRAEDVVAVREKAKRQDRIKFAL
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain
Protein sequence:
MSRFDTLFANLKAKNEGAFVPFVTLCDPDFDRSFEIIETLIANGADALELGFPFSDPLLDGSVIQAANKRALDGGYSTDACFEMIAKIRSKYPEIPIGLLLCANLVFVPTQCVFFNRCAESGVDAVLIADVPVLASEEFTQAAKKHGIQSVFICPPNADQVTIERIANLTEGYTYLVSRSGVTSAENQAHAKNLDNLIESLKRSNSAPILQGFGIAKPAQVKEALALGCDGAISGSAIVKIIERNLDSQTQLLSELAKFVSVMKAATKS

Annotated regions:
phrase: LELGFPFSDPLLD
type: ACTIVE_SITE
name: Trp_synthase_alpha_AS
description: Tryptophan synthase, alpha chain, active site