nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MRTSQYLFSTLKETPNDAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKVVREEMNKGGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTQESLQATYDVMYQVYSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTESDFAANIELAEAIAIGERQAPTAEMCLVDTPNAKTIAELVEQFNLPIEKTVKTLIVKGADENQPLVALIIRGDHELNEIKAQKHPLVADPLEFADETEIKAKIGSGVGSLGAVNLNIPAIIDRTVALMSDFSCGANIDGKHYFNVNWERDVAIPKVFDLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGKKYSEAMKATVQGEDGKPLVMTMGCYGIGVTRVVASAIEQHHDERGIIWPSDEIAPFTVAIVPMNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLDNGEIEYKNRRTGEKEMISKDKLLSVLNEKLGNL

Annotated regions:
phrase: VAIVPMNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLDNGEIEYKNRRTGEKEMISKDKLLSVLN
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: GLYNWLPTGIRVLKKVEKVVREEMNKGGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTQESLQATYDVMYQVYSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTESDFAANIELAEAIAIGERQAPTAEMCLVDTPNAKTIAELVEQFNLPIEKTVKTLIVKGADENQPLVALIIRGDHELNEIKAQKHPLVADPLEFADETEIKAKIGSGVGSLGAVNLNIPAIIDRTVALMSDFSCGANIDGKHYFNVNWERDVAIPKVFDLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGKKYSEAMKATVQGEDGKPLVMTMGCYGIGVTRVVASAIEQHHDERGIIW
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: TPNAKTIAELVEQFNLPIEKTVKTLIVKGADENQPLVALIIRGDHELNEIKAQKHPLVADPLEFADETEIKAKIGSGVGSLGAVNLNIPAIIDRTVALMSDFSCGANIDGKHYFNVNW
type: DOMAIN
name: YbaK/aa-tRNA-synth-assoc-dom
description: YbaK/aminoacyl-tRNA synthetase-associated domain

phrase: RFEDRGNRNFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTQESLQATYDVMYQVYSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTESDFAANIELAEAIAIGERQAPTAEMCLVDTPNAKTIAELVEQFNLPIEKTVKTLIVKGADENQPLVALIIRGDHELNEIKAQKHPLVADPLEFADETEIKAKIGSGVGSLGAVNLNIPAIIDRTVALMSDFSCGANIDGKHYFNVNWERDVAIPKVFDLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGKKYSEAMKATVQGEDGKPLVMTMGCYGIGVTRVVASAIEQ
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: DAQVVSHQLMLRAGMIRPMASGLYNWLPTGIRVLKKVEKVVREEMNKGGAIEVLMPVVQPAELWEESGRWDQYGPELLRFEDRGNRNFVLGPTHEEVITDLVRREVSSYKQLPLNLYQIQTKFRDEVRPRFGVMRSREFIMKDAYSFHTTQESLQATYDVMYQVYSNIFNRLGLDFRAVQADTGSIGGSASHEFQVLASSGEDDVVFSTESDFAANIELAEAIAIGERQAPTAEMCLVDTPNAKTIAELVEQFNLPIEKTVKTLIVKGADENQPLVALIIRGDHELNEIKAQKHPLVADPLEFADETEIKAKIGSGVGSLGAVNLNIPAIIDRTVALMSDFSCGANIDGKHYFNVNWERDVAIPKVFDLRNVVEGDPSPDGKGTLQIKRGIEVGHIFQLGKKYSEAMKATVQGEDGKPLVMTMGCYGIGVTRVVASAIE
type: DOMAIN
name: ProRS_core_prok
description: Prokaryote proline-tRNA ligase core domain

phrase: PFTVAIVPMNMHKSEAVQKYAEELYRTLQSQGVDVIFDDRKERPGVMFADMELIGVPHMVVIGEKNLDNGEIEYKNRRTGEKEMISKDKLLSV
type: DOMAIN
name: ProRS_anticodon_short
description: Proline--tRNA ligase, anticodon binding domain
Protein sequence:
MALCFATNNRHKLEEVRALLPKGYPLLSLEDIGCVVDLPETQKTLEGNAHQKASYVKEHFGIDCFAEDSGLEVEALNGAPGVYSARYAGLEKDSQANCSKLLQELKENEPRTARFRTVICLIRETAVHYFEGTISGTIVQQPRGAQGFGYDPVFQPLGHTRTFAQMSSQQKNRLSHRGKAVGKLVDFLGPEL

Annotated regions:
Protein sequence:
MELNLFKSDHSSSDDESSKPCCDLCMCTASMPPQCHCADIRLNSCHSACDRCACTRSMPGQCRCLDTTDFCYKPCKSSDEDDD

Annotated regions:
phrase: CCDLCMCTASMPPQCHCADIRLNSCHSACDRCACTRSMPGQCRCLDTTDFCYKP
type: DOMAIN
name: Prot_inh_BBI
description: Proteinase inhibitor I12, Bowman-Birk

phrase: CCDLCMCTASMPPQCHCADIRLNSCHSACDRCACTRSMPGQCRCLDTTDFCYKP
type: DOMAIN
name: Prot_inh_BBI
description: Proteinase inhibitor I12, Bowman-Birk

phrase: ACDRCACTRSMPGQCRCLDTTDF
type: DOMAIN
name: Prot_inh_BBI
description: Proteinase inhibitor I12, Bowman-Birk

phrase: CCDLCMCTASMPPQCHCADIRLNS
type: DOMAIN
name: Prot_inh_BBI
description: Proteinase inhibitor I12, Bowman-Birk

phrase: CADIRLNSCHSACDR
type: DOMAIN
name: Prot_inh_BBI
description: Proteinase inhibitor I12, Bowman-Birk
Protein sequence:
MWLGEYTWLNVFGIFLQATFIQNILLSNFLGMCSYLACSARVSTANGLGMSVALVLTVTGSINWVVHTFITGPKALTWISPSLANVNLNFLELIIFIVVIAAFTQILELLLEKVSRNLYLSLGIFLPLIAVNCAILGGVLFGITRNYPFIPMMIFSLGAGCGWWLAIVLFATIKEKLAYSDIPKNLQGMGISFITTGLIAMAFMSLTGIDISKPSAAAPTSDILETPNASSITTTNLKPVKKVRIAQQRAAKEKAINIKRGKTQ

Annotated regions:
Protein sequence:
MAITASMVAELRAKTDAPMMECKKALTEADGNFEKAEEILRVKLGNKAGKAASRVTAEGVIAYHSEGGIGALVEINCETDFVTKNDSFLAFTKAVAEGIVKNNPADVDAIGAMALSLDGFGPTVEDVRKGLIGKIGENMSVRRFKRFAGSKLASYLHGTRIGVVVEFDGDETAAKDVAMHVAAMKPVSLSSADVPADLVAKERSVAAAKAAEDAAKAQAEGKPVQSAEIVAKRIDGGVQKYLKEVSLYNQSFVKNDKQTVEQMLKERATTVKSFTLYVVGEGIEKKADDFAAEVAAQIAAAKAA

Annotated regions:
phrase: GALVEINCETDFVTKNDSFLAFTKAVAEGIVKNNPADVDAIGAMALSLDGFGPTVEDVRKGLIGKIGENMSVRRFKRFAGSKLASYLHGTRIGVVVEFDGDETAAKDVAMHVAAMKPVSLSSADVPADLVAKERSVAAAKAAEDAAKAQAEGKPVQSAEIVAKRIDGGVQKYLKEVSLYNQSFVKNDKQTVEQMLKERATTVKSFTLYVVG
type: DOMAIN
name: Transl_elong_EFTs/EF1B_dimer
description: Translation elongation factor EFTs/EF1B, dimerisation

phrase: EINCETDFVT
type: CONSERVED_SITE
name: Transl_elong_Ts_CS
description: Translation elongation factor Ts, conserved site
Protein sequence:
MRRYETIFIADPDLSPENQAQLFEKATTLIDANSGVLVEFDEWGTRRLAYEIRKKPRGHYVRLDFCGDGATVQGLENAFRIDERVLKFMTVFLSENADPEALRQAIAEEKEKKAEGQAAADAAPADGDDEAPKQPAPASDDDAPKQPETEAGSDETEAAAADKSDDNA

Annotated regions:
phrase: GTRRLAYEI
type: CONSERVED_SITE
name: Ribosomal_bS6_CS
description: Small ribosomal subunit protein bS6, conserved site
Protein sequence:
MRVMGILRNCHQWWIWRILGFGMLIICSVLGNLWVTVYYGVPVWQEAKTTLFCASDAKAYEREVHNIWATHACVPTDPSPQEIVLENVTENFNMWKNDMVDQMHEDIISLWDQSLKPCVKLTPLCVTLECRNVNVTNCENVTLNMKEEIKNCSFNITTELRDKKKKESALFYRIDIVPLNEKSNNSNGSSEYRLINCNTSTITQACPKVSFDPIPIHYCAPAGYAILKCNDKTFNGIGPCTNVSTVQCTHGIKPVVSTQLLLNGSLAEEEIVIRSENLTNNAKTIIVHLNKSIAIMCTRPGNNTRKSVRIGPGQTFYATGGVIGDIRQAFCIINGSNWNKTLQEVEEKLKRHFPNATEIKFEPSSGGDLEVTTHSFNCRGEFFYCDTTILFNRTMITDNINTLPCRIKQIINMWQGVGRAMYASPIAGNITCISNITGLLLTRDGGKTNSTTETFRPGGGNMKDNWRSELYKYKVVEIKPLGIAPTGAKRRVVEREKRAVGIGAVFLGFLGAAGSTMGVASMTLTVQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQTRVLAIERYLKDQQLLGLWGCSGKLICTTAVPWNSSWSNKSYADIWSNMTWMQWDREINNYTNTIYRLLEESQSQQEKNEKDLLALDSWQNLWNWFDITHWLWYIKIFIMIIGGLIGLRIVFAVLSLVNRVRQGYSPLSFQTLTPNPRGPDRLERIEEEGGEQDKDRSIRLVNGFLALAWDDLRNLCIFLYHRLRDFILIAART

Annotated regions:
phrase: MGVASMTLTVQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQTRVLAIERYLKDQQLLGLWGCSGKLICTTAVPWNSSWSNKSYADIWSNMTWMQWDREINNYTNTIYRLLEESQSQQEKNEKDLLALDSWQNLWNWFDITHWLWYIKIFIMIIGGLIGLRIVFAVLSLVNRVRQGYSPLSFQT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: VQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQTRVLAIERYLKDQQLLGLWGCSGKLICTTAVPWNSSWSNKSYADIWSNMTWMQWDREINNYTNTIYRLLEESQSQQEKNEKDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWQEAKTTLFCASDAKAYEREVHNIWATHACVPTDPSPQEIVLENVTENFNMWKNDMVDQMHEDIISLWDQSLKPCVKLTPLCVTLECRNVNV
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: MKEEIKNCSFNITTELRDKKKKESALFYRIDIVPLNEKSNNSNGSSEYRLINCNTSTITQACPKVSFDPIPIHYCAPAGYAILKCNDKTFNGIGPCTNVSTVQCTHGIKPVVSTQLLLNGSLAEEEIVIRSENLTNNAKTIIVHLNKSIAIMCTRPGNNTRKSVRIGPGQTFYATGGVIGDIRQAFCIINGSNWNKTLQEVEEKLKRHFPNATEIKFEPSSGGDLEVTTHSFNCRGEFFYCDTTILFNRTMITDNINTLPCRIKQIINMWQGVGRAMYASPIAGNITCISNITGLLLTRDGGKTNSTTETFRPGGGNMKDNWRSELYKYKVVEIKPLGIAPTGAKRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MSTAPFAAIILAAGMGTRMKSARHKVLHTIAGKPMLRHLTDSLAILNPARTVVVVGALKEQVEAEVAGKADVVVQQPQHGTGHAVLQARAALAGFDGKILVLYGDAPLVPAATMQRLLDALTEDVAVAVLGFRPAEPGAYGRVIAEAGAIRKMVEYKDATLAERAETLCNSGLMAVRAADLFPLLARVTNNNAAGEYYLPDVVGLALGDGRACVVIETAADEVAGANSRAELAGLEAIFQNRRRAELMAAGVSMQAPETVFLAADTDIAADVEIEPFVVFGPGVTIASGARIRAHSHIEGATIGEGCEIGPFARLRPGTVLGKGAKIGNFVETKKAVLGDGAKANHLTYLGDVTVGAKANIGAGTITCNYDGFFKYQTVIGAGAFIGSNSALVAPVTIGDGAIVAAGSTVTSDVSADALALVRPAQTEKTGWAARFRALQQAKKGK

Annotated regions:
phrase: IGSNSALVAPVTIGDGAIVAAGSTVTSD
type: CONSERVED_SITE
name: Hexapep_transf_CS
description: Hexapeptide transferase, conserved site

phrase: AIILAAGMGTRMKSARHKVLHTIAGKPMLRHLTDSLAILNPARTVVVVGALKEQVEAEVAGKADVVVQQPQHGTGHAVLQARAALAGFDGKILVLYGDAPLVPAATMQRLLDALTEDVAVAVLGFRPAEPGAYGRVIA
type: DOMAIN
name: MobA-like_NTP_Trfase
description: MobA-like NTP transferase

phrase: ELMAAGVSMQAPETVFLAADTDIAADVEIEPFVVFGPGVTIASGARIRAHSHIEGATIGEGCEIGPFARLRPGTVLGKGAKIGNFVETKKAVLGDGAKANHLTYLGDVTVGAKANIGAGTITCNYDGFFKYQTVIGAGAFIGSNSALVAPVTIGDGAIVAAGSTVTSDVSADALALVRPA
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain

phrase: GATIGEGCEIGPFARLRPGTVLGKGAKIGNFV
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: TVIGAGAFIGSNSALVAPVTIGDGAIVAAGSTV
type: REPEAT
name: Hexapep
description: Hexapeptide repeat
Protein sequence:
MRVKGIRKNCQLLWRGGILLLGILMICNATEQLWVTVYYGVPVWKEATTTLFCASDAKAYETEGHNVWATHACVPTDPSPQEVKLENVTENFNMWKNNMVDQMHEDIINLWDQSLKPCAKLTPLCVTLNCTNVNATNTNNSSGIEGGEMKNCSFNITTGVRDKVQSDYAIFSKLDVVPIDDRDSNTSYRLINCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGKGLCTEVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSENFSDNAKTIIVQLNKSIEINCTRPNNNTRRSIPIGPGRAFFATDIIGDIRQAHCNISRAKWNENLKQIAKKLREQFNKTIVFKQHSGGDPEIVMHSFNCRGEFFYCNTTQLFNSNDTEGSNTTEENITLPCRIKQIINMWQEVGKAMYAPPIRGQISCSSNITGLLLTRDGGADSTNETFRPGGGDMRDNWRSELYKYKVVRIEPLGIAPSKAKRRVVQREKRAVGIGAVFLGFLGAAGSTMGAASMALTVQARQLLSGIVQQQNNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLHDQQLLGIWGCSGKLICTTTVPWNTSWSNKSLNTIWNNMTWMEWEREIDNYTGIIYSLIEESQNQQEKNELELLELDKWAGLWNWFDITNWLWYIKIFIMIVGGLIGFRIIFAVLSIVNRVRQGYSPLSFQTRLPTRRGPDRPEGIEEEGGERDRDTSGRLVDGFLTLIWSDLRSLSLFGYHHLRDLLLIVTRIVEL

Annotated regions:
phrase: MGAASMALTVQARQLLSGIVQQQNNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLHDQQLLGIWGCSGKLICTTTVPWNTSWSNKSLNTIWNNMTWMEWEREIDNYTGIIYSLIEESQNQQEKNELELLELDKWAGLWNWFDITNWLWYIKIFIMIVGGLIGFRIIFAVLSIVNRVRQGYSPLSFQ
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: VQARQLLSGIVQQQNNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLHDQQLLGIWGCSGKLICTTTVPWNTSWSNKSLNTIWNNMTWMEWEREIDNYTGIIYSLIEESQNQQEK
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: TNTNNSSGIEGGEMKNCSFNITTGVRDKVQSDYAIFSKLDVVPIDDRDSNTSYRLINCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGKGLCTEVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSENFSDNAKTIIVQLNKSIEINCTRPNNNTRRSIPIGPGRAFFATDIIGDIRQAHCNISRAKWNENLKQIAKKLREQFNKTIVFKQHSGGDPEIVMHSFNCRGEFFYCNTTQLFNSNDTEGSNTTEENITLPCRIKQIINMWQEVGKAMYAPPIRGQISCSSNITGLLLTRDGGADSTNETFRPGGGDMRDNWRSELYKYKVVRIEPLGIAPSKAKRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: LWVTVYYGVPVWKEATTTLFCASDAKAYETEGHNVWATHACVPTDPSPQEVKLENVTENFNMWKNNMVDQMHEDIINLWDQSLKPCAKLTPLCVTLNCTNVNATNTN
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MLASVRVNQLQRLLLSARRLSSSPIIPPSRLLHQRLFSTSDTDASAASFSSSHPKIQTLEGKASNKSRSTSSTTSLNEDELAKFSAIADTWWHSEGPFKPLHQMNPTRLAFIRSTLCRHFSKDPSSAKPFEGLKFIDIGCGGGLLSEPLARMGATVTGVDAVDKNVKIARLHADMDPVTSTIEYLCTTAEKLADEGRKFDAVLSLEVIEHVANPAEFCKSLSALTIPNGATVLSTINRTMRAYASTIVGAEYILRWLPKGTHQWSSFVTPEEMSMILQRASVDVKEIAGFVYNPITGRWLLSDDISVNYIAYGTKRKDLGDI

Annotated regions:
phrase: IDIGCGGGLLSEPLARMGATVTGVDAVDKNVKIARLHADMDPVTSTIEYLCTTAEKLADEGRKFDAVLSLEVIEHVANPAEFCKSLSALTIPNGAT
type: DOMAIN
name: Methyltransf_11
description: Methyltransferase type 11
Protein sequence:
MSVSNVFFVGLMGAGKTTVGRAVARRLDLPFFDSDHEIEARCGVRVPVIFEHEGEMGFRDRETQMIDELTARHGVVVATGGGAVLRPENRAFLRERGTVIYLRANPHDLYLRTRHDKNRPLLQTENPRARLEELHAIRDPLYREVAHFVIETGKPTVAQLVNMVLMQLEVAGIVVPPAASSPTSQVSRQS

Annotated regions:
phrase: RDRETQMIDELTARHGVVVATGGGA
type: CONSERVED_SITE
name: Shikimate_kinase_CS
description: Shikimate kinase, conserved site
Protein sequence:
MATMNEPKLIAGNANLPLAEAIARRMSMNRGVQLGLVDARVERFNDGEIFVEVYENVRGEDMFIIQPTSNPANDNLMELLIMTDALRRSSAARITAVIPYFGYARQDRRTKARTPISAKLVANLLAQAGIERVLTMDLHAAQIQGFFDIPVDNLYASPIFALDIKSNFKGQMDDLMVVSPDVGGVARARELAKRINSPLSIVDKRREKPGEVAEMTVIGDVTDKICIIVDDMCDTAGTLCKAAEVLLENGAWEVHAYITHGVMSGPAVTRVTNSVMKSLVITDTIQPSEAVKAAPNIRIVPTAPIFSQAILNIWYGTSVSSLFEDSTLTPIYESLYAMD

Annotated regions:
phrase: ASPIFALDIKSNFKGQMDDLMVVSPDVGGVARARELAKRINSPLSIVDKRREKPGEVAEMTVIGDVTDKICIIVDDMCDTAGTLCKAAEVLLENGAWEVHAYITHGVMSGPAVTRVTNSVMKSLVITD
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: DLHAAQIQGFFDIPV
type: CONSERVED_SITE
name: PRib_PP_synth_CS
description: Phosphoribosyl pyrophosphate synthetase, conserved site

phrase: KLIAGNANLPLAEAIARRMSMNRGVQLGLVDARVERFNDGEIFVEVYENVRGEDMFIIQPTSNPANDNLMELLIMTDALRRSSAARITAVIPYFGYARQDRRTKARTPISAKLVANLLAQA
type: DOMAIN
name: Pribosyltran_N
description: Ribose-phosphate pyrophosphokinase, N-terminal domain
Protein sequence:
MSIPRELSVASGSKSISPKPSVYDYITLLKPRVMLLVVFTALVGLIVSPVSINPLYGFLAILCIAVGGGGAGALNMWYDADIDAVMERTKSRPIPAGKISSRKAFIFGMVLSILSVLIMGSFVNWFAALFLAFTIFFYIVVYTIWLKRRTPQNIVIGGAAGAFPPMIGWAAATGTVNIESFLLFLIIFMWTPPHFWSLSLFSSLDYDAAGIPMMPNVRGEHSTKKQILFYTILMAICAAGPFIIGFAGVFYGIFSTVLSIIFIHFAYRLWKSNTYDATILMAKKTFFFSLFYLAAIFGILLIEFFVWCFIIL

Annotated regions:
phrase: NMWYDADIDAVMERTKSRPIPA
type: CONSERVED_SITE
name: UbiA_prenylTrfase_CS
description: UbiA prenyltransferase conserved site
Protein sequence:
KAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPDKDIEFIYTAPSSAVCGVSLDVGGKKEYLIAGKADGNGKMHITLCDFIVPWDTLST

Annotated regions:
phrase: KAVSEKEVDSGNDIYGNPIKRIQYEIKQIKMFKGPDKDIEFIYTAPSSAVCGVSLDVGGKKEYLIAGKADGNGKMHITLCDFIVPWDTLS
type: DOMAIN
name: Netrin_domain
description: Netrin domain
Protein sequence:
MSNIEERVKKIIVEQLGVKEEDVKPAASFVDDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYVSKNQ

Annotated regions:
phrase: SNIEERVKKIIVEQLGVKEEDVKPAASFVDDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYVSKN
type: DOMAIN
name: PP-bd_ACP
description: Phosphopantetheine binding ACP domain

phrase: DLGADSLDTVELVMA
type: PTM
name: Ppantetheine_attach_site
description: Phosphopantetheine attachment site

phrase: ERVKKIIVEQLGVKEEDVKPAASFVDDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDY
type: DOMAIN
name: PP-bd_ACP
description: Phosphopantetheine binding ACP domain
Protein sequence:
MWLPPLRRAPTRRPNFFKQPKQNYSQKHNSTHPNNNANNGQERKRFRDRLKSSFTKSPMKWAPIPIGLGFAYFTFMKFFDYKSTQDPDSTPTRYRGPWYFQSYAALPLKSISRLFGAFNEIILPTFLRAPGYKLYAWFFNCNLDEMKDPVLEHYPNLSSFFFRELKDGVRPIADSTLVSPADGRVLHFGEVTGSSIEQIKGVTYSLDDLLGRKPSSPTEYAIKSETFAHADEKEFAQVNGINYSLDDLLEGNEISQPVETPNQNSTEPTSPIPSWHTLKPGNKLFFAVIYLAPGDYHRFHSPSNWVVHSRRHFAGELYSVSPFMAKYFQNLFVLNERVALVGKWRHGFFSMLPVGATNVGSIKIHFDDDLKTNEKRVRNRGTYTEVSYQKVSSFLKGYPLQSGQEIGGFCLGSTIVLVFEAPKNFQFNIEAGQKIKMGERMGDIL

Annotated regions:
Protein sequence:
MKVGNTLMAARAREGRTRVLIVDDSAMVRQALALGLSTDPRLEVVGTASGAEAARAQMAALKPDVVTLDLEMPQMDGLTFLRSYMESAPVPTVVISSLTRTSGETAMRAMEAGAVDIISKPSLGAGQGLPAIMRDVCARVWAAARARLAPPDGAAPAPVATGASEDWIHALGASTGGVQALSRILPFFPAQSPGLLVVQHMPEGFTAAFARRLDALCRMRVREAADGDLVLPGLVLIAPGGLRHMEIERAGGVCRVRLVAGAPVSYSRPSVDRMFLSLAAAAGPRVSAALLTGMGRDGAAGLLAIRRAGGRTFAQDEGSSAVFGMPLAARDLRAAEEILTLDDIPARMMLAAAADTRAPSLASND

Annotated regions:
phrase: GASEDWIHALGASTGGVQALSRILPFFPAQSPGLLVVQHMPEGFTAAFARRLDALCRMRVREAADGDLVLPGLVLIAPGGLRHMEIERAGGVCRVRLVAGAPVSYSRPSVDRMFLSLAAAAGPRVSAALLTGMGRDGAAGLLAIRRAGGRTFAQDEGSSAVFGMPLAARDLRAAEEILTLDDIPARMMLAAAA
type: DOMAIN
name: Sig_transdc_resp-reg_Me-estase
description: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase

phrase: ALGASTGGVQALSRILPFFPAQSPGLLVVQHMPEGFTAAFARRLDALCRMRVREAADGDLVLPGLVLIAPGGLRHMEIERAGGVCRVRLVAGAPVSYSRPSVDRMFLSLAAAAGPRVSAALLTGMGRDGAAGLLAIRRAGGRTFAQDEGSSAVFGMPLAARDLRAAEEILTLDDIPARM
type: DOMAIN
name: Sig_transdc_resp-reg_Me-estase
description: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase

phrase: TRVLIVDDSAMVRQALALGLSTDPRLEVVGTASGAEAARAQMAALKPDVVTLDLEMPQMDGLTFLRSYMESAPVPTVVISSLTRTSGETAMRAMEAGAVDIISKPSLGAGQGLPA
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: RVLIVDDSAMVRQALALGLSTDPRLEVVGTASGAEAARAQMAALKPDVVTLDLEMPQMDGLTFLRSYMESAPVPTVVISSLTRTSGETAMRAMEAGAVDIISKPSLGAGQGLPAIMR
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: ALGASTGGVQALSRILPFFPAQSPGLLVVQHMPEGFTAAFARRLDALCRMRVREAADGDLVLPGLVLIAPGGLRHMEIERAGGVCRVRLVAGAPVSYSRPSVDRMFLSLAAAAGPRVSAALLTGMGRDGAAGLLAIRRAGGRTFAQDEGSSAVFGMPLAARDLRAAEEILTLDDIPA
type: DOMAIN
name: Sig_transdc_resp-reg_Me-estase
description: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase

phrase: VLIVDDSAMVRQALALGLSTDPRLEVVGTASGAEAARAQMAALKPDVVTLDLEMPQMDGLTFLRSYMESAPVPTVVISSLTRTSGETAMRAMEAGAVDIISKP
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain
Protein sequence:
MPYLGEAGASLEAPRGERSGRSRFFSLFERQRSDSSKVTRSGAGGGGLAGRGPRGRGPAGRGRRQRAGARLVRLRGPSGRGGGERGRASAVRVRAMGAAGGRAMVGLLVFVAAAASSSGEPSGLRFSDDLLTLYGANGSLEAAHVSRLLRELGAAPVRAPQDLAPLHHNQCLSAEEIFSTLGVSNETQITSENFSTICPAVLQQLVFHPCSASSEHRHKPTPSEVWGYGFLAVTVINLASLLGMFFIPWIKKPYFPKILTYFVGLAIGTLFSNAIFQLIPEAFGFDPKVDNYIEKSAAVFGGFYILFFVERVLKMILVTYGQADHMHFADTEERRSQVKADQPKPLPSSNGGTCYANPGVSEPNGQLHFDNVSVVSFQDGKEQSSLCKCFRGPKLSEIGTIAWMITLSDALHNFIDGLAIGASCTLSLLQGISTSIAILCEEFPHELGDFVILLNAGMSTRQALFFNFLSACSCYLGLIFGILVGNNFTPNIIFALAGGMFLYISLADMFPEMNDMLREKVTGRKTDFTYFVIQNAGLLTGFTAILLITLYAGNIDLH

Annotated regions:
Protein sequence:
MIVSEPLLRVENLSKTYPNGVQALKNINLEVHPGEFLVVIGLSGSGKSTLLRCLNRLQEPTSGNIYFSGQEIGQVQDAEKIRSVRSKMAMIFQHFNLIPRQSVLKNVLMGRLAAKSTWQSLWGMFSDAERIEAKENLRLVGIAEKASLRADQLSGGQKQRVAIARALMQKPVLLLADEPVSSLDPATCHVVMDYLRRINQEMGITVIANLHFLSLVRKYATRVVALKDGEIVFRGKPEEITEEWFRRIYGEGAQDVAPNDI

Annotated regions:
phrase: LKNINLEVHPGEFLVVIGLSGSGKSTLLRCLNRLQEPTSGNIYFSGQEIGQVQDAEKIRSVRSKMAMIFQHFNLIPRQSVLKNVLMGRLAAKSTWQSLWGMFSDAERIEAKENLRLVGIAEKASLRADQLSGGQKQRVAIARALMQKPVLLLADEP
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: LRVENLSKTYPNGVQALKNINLEVHPGEFLVVIGLSGSGKSTLLRCLNRLQEPTSGNIYFSGQEIGQVQDAEKIRSVRSKMAMIFQHFNLIPRQSVLKNVLMGRLAAKSTWQSLWGMFSDAERIEAKENLRLVGIAEKASLRADQLSGGQKQRVAIARALMQKPVLLLADEPVSSLDPATCHVVMDYLRRINQEMGITVIANLHFLSLVRKYATRVVALKDGEIVFRGKPEEITEEWFRRIYGEG
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: PGEFLVVIGLSGSGKSTLLRCLNRLQEPTSGNIYFSGQEIGQVQDAEKIRSVRSKMAMIFQHFNLIPRQSVLKNVLMGRLAAKSTWQSLWGMFSDAERIEAKENLRLVGIAEKASLRADQLSGGQKQRVAIARALMQKPVLLLADEPVSSLDPATCHVVMDYLRRINQEMGITVIANLHFLSLVRKYATRVVALKDG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LSGGQKQRVAIARA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site
Protein sequence:
MWREDLPLIELNNFEALQIGLASPEQIREWSRGEVKKPETINYRTLKPEKDGLFCERIFGPIKDWECHCGKYKRVRYKGIVCDRCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLILDMSPRSLEKVLYFASYVVLDPKETPLLKKQLLSEKEYRESVDKYGEEAFDAEMGAEAVKKLLAEIDLEQLSKELKEALKTSTGQKKVRTIRRLEVVESFRKSTNRPEWMIIDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKKLLDLGAPDIIVRNEKRMLQEAVDALIDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKMYQCGLPKEMALELFKPFVMKKLVESGAAHNIKSSKKMVERVMPQVWDVLEEVISEHPVLLNRAPTLHRLGIQAFQPVLVEGRAIKLHPLVCTAYNADFDGDQMAVHVPLSVEAQAEARFLMLAANNILKPSDGKPVCVPTQDMILGSYYLTLDKDGVKGEGKIFSNPDEVMMAYQTGAINIHAKIKVRMTKEKDGKIISGIIETTPGKLIFNDSIPQDLGFVDRSNPENEFKLEIDFLVTKKNLGKIIDKCYTKYGATETSTMLDKIKARGYHYSTIGAITISVSDMTVPESKNRLLSDTDLAVEKIEKMYRRGFISEDERYERVIEKWTQTTEDVANALMDNLDRFNPIFMMADSGARGSKSQIKQLAGMRGLMANPSGKIIELPIRASFREGLDVLEYFISTHGAR

Annotated regions:
phrase: ISEDERYERVIEKWTQTTEDVANALMDNLDRFNPIFMMADSGARGSKSQIKQLAGMRGLMANPSGKIIELPIRAS
type: DOMAIN
name: RNA_pol_Rpb1_4
description: RNA polymerase Rpb1, domain 4

phrase: NILKPSDGKPVCVPTQDMILGSYYLTLDKDGVKGEGKIFSNPDEVMMAYQTGAINIHAKIKVRMTKEKDGKIISGIIETTPGKLIFNDSIPQDLGFVDRSNPENEFKLEIDFLVTKKNLGKIIDKCYTKYGATETSTMLDKIKARGYHYSTIGAITISVSD
type: DOMAIN
name: RNA_pol_Rpb1_3
description: RNA polymerase Rpb1, domain 3

phrase: EWMIIDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKKLLDLGAPDIIVRNEKRMLQEAVDALIDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKMYQCGLPKEMALELFKPFVMKKLVESGAAHNIKSSKKMVERVMPQVWDVLEEVISEHPVLLNRAPTLHRLGIQAFQPVLVEGRAIKLHPLVCTAYNADFDGDQMAVHVPLSVEAQAEARFLMLAANNILKPSDGKPVCVPTQDMILGSYYL
type: DOMAIN
name: RNA_pol_N
description: RNA polymerase, N-terminal

phrase: GKRVDYSGRSVIVVGPELKMYQCGLPKEMALELFKPFVMKKL
type: DOMAIN
name: RNA_pol_asu
description: RNA polymerase, alpha subunit

phrase: SGAAHNIKSSKKMVERVMPQVWDVLEEVISEHPVLLNRAPTLHRLGIQAFQPVLVEGRAIKLHPLVCTAYNADFDGDQMAVHVPLSVEAQAEARFLM
type: DOMAIN
name: RNA_pol_asu
description: RNA polymerase, alpha subunit

phrase: NNFEALQIGLASPEQIREWSRGEVKKPETINYRTLKPEKDGLFCERIFGPIKDWECHCGKYKRVRYKGIVCDRCGVEVTKSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLILDMSPRSLEKVLYFASYVVLDPKETPLLKKQLLSEKEYRESVDKYGEEAFDAEMGAEAVKKLLAEIDLEQLSKELKEALKTSTGQKKVRTIRRLEVVESFRKSTNRPEWMIIDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKKLLDLGAPDIIVRNEKRMLQEAVDALIDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQN
type: DOMAIN
name: RNA_pol_Rpb1_1
description: RNA polymerase Rpb1, domain 1
Protein sequence:
MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKLEIITREDPRALELIRHDTAHVLAEAVQELFPGTQVTIGPVIENGFYYDFARNEPFTLDDLPVIEKKMREIIQRNKPFTKEVWSREKAKQVFSDKGESYKVELVDAIPAGQDLKIYYQGDWFDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRIYGTAFANDNDLQAYLHMLEEAEKRDHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNTPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLHINDLILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQSNNIKTGILPGEGAFYGPKFEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGILIENFAGHMPLWFAPVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREHSLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIARLCEEATPPDLLRLKNAG

Annotated regions:
phrase: PVQVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREHSLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIAR
type: DOMAIN
name: ThrRS_anticodon
description: Threonine-tRNA ligase, class IIa, anticodon-binding domain

phrase: TDDDRVFALKPMNCPGHVQIFKHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLHINDLILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQSNNIKTGILPGEGAFYGPKFEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGILIEN
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: MSNTVSLQFPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKLEII
type: DOMAIN
name: TGS
description: TGS

phrase: QVVVATITSDADEYAKEAAAKLKAAGLQVVTDLRNEKINYKVREHSLQKVPVILVCGKREAEEKTVNMRRLGSRDQESMTLDEAIAR
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: DHRRLGREMDLFHFQEEGPGVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNTPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLHINDLILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQSNNIKTGILPGEGAFYGPKFEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGILIENFAGHMPLWFA
type: DOMAIN
name: ThrRS_core
description: Threonine-tRNA ligase catalytic core domain

phrase: KIYYQGDWFDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRI
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD

phrase: FPDGSVREYDASMTGAALAESISKSLAKKAVAYAVDGTVRDLSDPLGASGKLEII
type: DOMAIN
name: TGS
description: TGS

phrase: GVVFWHAKGWKMFQNLVSYMRRRLDSHGYQEVNTPQVLDKSLWETSGHWGWYRDNMFKVTVAGDDTDDDRVFALKPMNCPGHVQIFKHGLKSYRDLPIKLAEFGNVHRYEPSGALHGLMRVRGFTQDDAHIFCTEEQMAAECLHINDLILSVYKDFGFEEITIKLSTRPEKRVGSDELWDRAESVMMTVLEQIRQQSNNIKTGILPGEGAFYGPKFEYTLKDAIGREWQCGTTQVDFNLPERFGAFYIGADSEKKQPVMIHRAICGSMERFLGILIENFAGHM
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: LKIYYQGDWFDLCRGPHMASTGQIGNSFKLMKVAGAYWRGDANNPMLTRI
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD