nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MLLDAGPQFPAIGVGSFARHHHHSAAAAAAAAAEMQDRELSLAAAQNGFVDSAAAHMGAFKLNPGAHELSPGQSSAFTSQGPGAYPGSAAAAAAAAALGPHAAHVGSYSGPPFNSTRDFLFRSRGFGDSAPGGGQHGLFGPGAGGLHHAHSDAQGHLLFPGLPPEQHGPHASQNVLNGQMRLGLPGEVFGRSEQYRQVASPRTDPYSAAQLHNQYGPMNMNMGMNMAAAAAHHHHHHHHPGAFFRYMRQQCIKQELICKWIDPEQLSNPKKSCNKTFSTMHELVTHVSVEHVGGPEQSNHVCFWEECPREGKPFKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHTGEKPFQCEFEGCDRRFANSSDRKKHMHVHTSDKPYLCKMCDKSYTHPSSLRKHMKVHESSPQGSESSPAASSGYESSTPPGLVSPSAEPQSSSNLSPAAAAAAAAAAAAAAAVSAVHRGAGSGSSGSGGGSAAGSGGGGGGAGGGGGGSSGGGSGTTGGHSGLSSNFNEWYV

Annotated regions:
phrase: YLCKMCDKSYTHPSSLRKHMKVHESSP
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: CFWEECPREGKPFKAKYKLVNHIRVHTGE
type: DOMAIN
name: Znf-C2H2_ZIC1-5/GLI1-3-like
description: ZIC1-5/GLI1-3like, C2H2 zinc finger

phrase: EECPREGKPFKAKYKLVNHIRVHTGEK
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: CKMCDKSYTHPSSLRKHMKV
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: FPCPFPGCGKVFARSENLKIHKRTHTGEK
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: FQCEFEGCDRRFANSSDRKKHMHV
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: LSNPKKSCNKTFSTMHELVTHVSVE
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: YLCKMCDKSYTHPSSLRKHMKV
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: HVCFWEECPREGKPFKAKYKLVNHIRV
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: FPCPFPGCGKVFARSENLKIHKRT
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: QCIKQELICKWIDPEQLSNPKKSCNKTFSTMHELVTHVSVEHVGG
type: DOMAIN
name: Znf_ZIC
description: ZIC protein, zinc finger domain

phrase: FQCEFEGCDRRFANSSDRKKHMHV
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: YLCKMCDKSYTHPSSLRKHMKV
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: FPCPFPGCGKVFARSENLKIHKRT
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: CPFPGCGKVFARSENLKIHKRT
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: CEFEGCDRRFANSSDRKKHMHV
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: FQCEFEGCDRRFANSSDRKKHMHVHTSDK
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type
Protein sequence:
MQKFDVKTFQGLILQLQDYWSRQGCTIIQPLDMEVGAGTSHPMTCLRALGPEPIACAYVQPSRRPTDGRYGENPNRLQHYYQFQVIIKPSPDNIQELYLGSLKELGMDPEIHDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPVTGEITYGLERLAMYIQGVDSVYDLVWSDGPLGKTTYGDVFHQNEVEQSTYNFEHADVEFLFHCFEQYEKEAQNLLALEKPLPLPAYERILKAAHSFNLLDARKAISVTERQRYILRIRTLTKAVAEAYYASREALGFPMCQRSENKQG

Annotated regions:
Protein sequence:
MQDIKEFNLKELESEFLSLGIKAYHARQIFTWIYKKGVFDFSRMSDLSSKLKKLLDDKFKILDLKLIQSRKSKDGTKKFLFELADKNLIEAVIIPAQGRVTGCVSTQGGCKFSCKFCASGLLGFKRNLTCSEILGEILYLKSDIYGRNLTHIVFMGIGEPLDNYDNVLEAIRIINSKDGFNIGARRITISTCGITPAIKRLAEENLQIELSVSLHAANDKLRSNLMPVNKKYPLKELIKACKEYSLKTNRQVTFEHILIKGVNSSLKNAQDLVKLLEGFKLSKINIIPANYIKELHIEPADKTAMILFKDYLVKYGVHVTLRKERGEDIGAACGQLRLQHEKE

Annotated regions:
phrase: AQGRVTGCVSTQGGCKFSCKFCASGLLGFKRNLTCSEILGEILYLKSDIYGRNLTHIVFMGIGEPLDNYDNVLEAIRIINSKDGFNIGARRITISTCGITPAIKRLAEENLQIELSVSLHAANDKLRSNLMPVNKKYPLKELIKACKEYSLKTNRQVTFEHILIKGVNSSLKNAQDLVKLLEGFKLSKINIIPANYIKELHIEPADKTAMILFKDYLVKYGVHVTLRKERGE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VTGCVSTQGGCKFSCKFCASGLLGFKRNLTCSEILGEILYLKSDIYGRNLTHIVFMGIGEPLDNYDNVLEAIRIINSKDGFNIGARRITISTCGITPAIKRLAEENLQIELSVSLHAANDKLRSNLMPVNKKYPLKELIKACKEYSLKTNRQVTFEHILIKGVNSSLKNAQDLVKLLEGFKLSKINIIPANYIKELHIEPADKTAMILFK
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: STQGGCKFSCKFCASGLLGFKRNLTCSEILGEILYLKSDIYGRNLTHIVFMGIGEPLDNYDNVLEAIRIINSKDGFNIGARRITISTCGITPAIKRLAEENLQIELSVSLHAANDKLRSNLMPVNKKYPLKELIKACKEYSLKTNRQVTFEHILIKGVN
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: DIKEFNLKELESEFLSLGIKAYHARQIFTWIYKKGVFDFSRMSDLSSKLKKLLDDKFK
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MANNEVIENTWLERPSPEVAPELIGCTLVRRISEEKIIRSTIVETEAYAPGDPACHAYRKRTPRNTVMFGPPGISYVFLIYGMYHCLNVVTDIDGIPSVVLIRALQLESVPNWLWEHIPKQKSKPKVSRLAAGPGKLCRLLNIDLNLNGSRLRAGQPMWLEQRSPSFEKNLQIVQTTRIGITKGTNLLWRWYLANCDAVSK

Annotated regions:
Protein sequence:
MASAEPLTALSRWYLYAIHGYFCEVMFTAAWEFVVNFNWKFPGVTSVWALFIYGTSILIVERMYLRLRGRCPLLVRCVIYTLWTYLWEFTTGFILRQFNACPWDYSQFDFDFMGLITLEYAVPWFCGALIMEQFIIRNTLRLRFDKDAEPGEPASPPALANGHVKTD

Annotated regions:
Protein sequence:
MKEIWLLAESESWDEAKEMLKDAIEIGFDGALVRRDFLERAEKLGRMKIVPIEDAVVKISSAEDQERALQREVVVLKFEDWKVIPLENIVAMKKSGKVIAAVDTIEDAKLALTTLERGADGIAVSGDRETLRKFYEVVKEEGERVELVRARVKEIRPLGVGERVCIDTVTLMTPGEGMLVGNQASFMFLVASESEESEYVASRPFRVNAGSVNAYLKVGDKTRYLAELKAGDEVEVVKFDGAVRKSYVGRVKIERRPLILIRAEVDGVEGSVILQNAETIKLVAPDGKHVSVAELKPGDEILVWLGKKARHFGVEVDEFIVER

Annotated regions:
Protein sequence:
MQFSTFQKNLDNWQGASLIFGVLEEEIASQLENIKFIVDPKLLLKKVTQKKFKGEKGETLSFEFLDQKLETLIIVGLGKSKYLNKSDIENSIGNLIRKTVDKNEKISILLPWELINSQLEINQLAESARLSAYKDNRFNKKKDEKKVLKEIEFLNFKSFENICFEEAEKICEGVELARRLVAAPPNSLTPQEMSMQASQIAKDHGLEVKILEAKECEDLGMGAYLAVAKGSDLDPKFIHLTLKSEGPIKEKIAIVGKGLTFDSGGYNLKVGASQIEMMKYDMGGSAAVLGAAKALGAIKPKGLEIHFIVAACENMINGSAVHPGDVVKASNGKTIEINNTDAEGRLTLADALTYASDLKPDSIIDLATLTGAIVVALGNDVAGFWSNNDDLANDLKAASAQAGEELWRMPLQKAYKEGLKSHIADMKNTGPRAGGSITAALFLEEFFDTEIKWAHIDIAGTCWTDKNKGINPSGATGFGVKTLVQWIKNK

Annotated regions:
phrase: NTDAEGR
type: DOMAIN
name: Peptidase_M17_C
description: Peptidase M17, leucyl aminopeptidase, C-terminal

phrase: LLLKKVTQKKFKGEKGETLSFEFLDQKLETLIIVGLGKSKYLNKSDIENSIGNLIRKTVDKNEKISILLPWELINSQLEINQLAESARLSAYKDNRFNKK
type: DOMAIN
name: Peptidase_M17_N
description: Peptidase M17, leucyl aminopeptidase, N-terminal

phrase: LARRLVAAPPNSLTPQEMSMQASQIAKDHGLEVKILEAKECEDLGMGAYLAVAKGSDLDPKFIHLTLKSEGPIKEKIAIVGKGLTFDSGGYNLKVGASQIEMMKYDMGGSAAVLGAAKALGAIKPKGLEIHFIVAACENMINGSAVHPGDVVKASNGKTIEINNTDAEGRLTLADALTYASDLKPDSIIDLATLTGAIVVALGNDVAGFWSNNDDLANDLKAASAQAGEELWRMPLQKAYKEGLKSHIADMKNTGPRAGGSITAALFLEEFFDTEIKWAHIDIAGTCWTDKNKGINPSGATGFGVKTL
type: DOMAIN
name: Peptidase_M17_C
description: Peptidase M17, leucyl aminopeptidase, C-terminal
Protein sequence:
MSFFRCIGRFALFMLDPEHAHRLAIVGLKSGLNSYRKVVDRRLCLTVAGLEFENFVGLAAGFDKNAEVVEAIFHLGFGFTEIGTVTPKPQVGNPKPRLFRLREDEAIINRMGFNNNGHHIVYSRLCACKKLGIVGINIGANKDTVDKIDDYATGIACFYDIADYFTVNISSPNTPGLRDLQARDSLHLLMNALSQARREQKKKHGFSVPIFLKIAPDLSEKELDDVAEEMKLSDFDGLIVSNTTLSRQGLRDSKLSGEKGGLSGCPLFERSTIVLAKMRQKLGKEIAIIGVGGIKDAQTALEKIKAGADLIQLYSGIVYEGPDLAITILKEILQFMQQDGVDTIKTYRDHRVEYWAKRALPL

Annotated regions:
phrase: GFTEIGTVTPKPQVGNPKP
type: CONSERVED_SITE
name: Dihydroorotate_DH_CS
description: Dihydroorotate dehydrogenase, conserved site

phrase: IIGVGGIKDAQTALEKIKAG
type: CONSERVED_SITE
name: Dihydroorotate_DH_CS
description: Dihydroorotate dehydrogenase, conserved site

phrase: LCLTVAGLEFENFVGLAAGFDKNAEVVEAIFHLGFGFTEIGTVTPKPQVGNPKPRLFRLREDEAIINRMGFNNNGHHIVYSRLCACKKLGIVGINIGANKDTVDKIDDYATGIACFYDIADYFTVNISSPNTPGLRDLQARDSLHLLMNALSQARREQKKKHGFSVPIFLKIAPDLSEKELDDVAEEMKLSDFDGLIVSNTTLSRQGLRDSKLSGEKGGLSGCPLFERSTIVLAKMRQKLGKEIAIIGVGGIKDAQTALEKIKAGADLIQLYSGIVYEGPDLAITILKEILQF
type: DOMAIN
name: Dihydroorotate_DH_cat
description: Dihydroorotate dehydrogenase, catalytic
Protein sequence:
MSGKLRLYKEKLEGYNRFYSIVKTIKMVTLAKYRAAQGRIRTRDFSLRYTELAFSKPQASRDAVAAAKNALVYIPITTNRGSCGALNSNIVRCIDSVVSSKMVLMPVGKRGIDSFSKLYPDEFRYGIINDMKESMHFGYATFVIENAYEVSKDADRYQVIFNRFVSAGVQRNAVYNIPSYEKWKEDLADAASSDNQKNRYLFANALQNEEEQLIRDFFDFHAALAVLNAVGENELSEQAARLVAVEGQLTNISSLQQRTSSLYNKTRQFGITAALIEILSAMSSLEGNAMKGVRRNKFWEGAVTK

Annotated regions:
Protein sequence:
MLEQEQASYRVERINELIRRELTLLLRTSIKDPRLRDMIITDVLISRDLSSAKVFYTVIKEDKKMIEPLLDKASGFFRIHLSKTIDLRHTPVLRFIFDSAPNTGARIEQLLSKL

Annotated regions:
phrase: FRIHLSKTIDLRHTPVLRFIF
type: CONSERVED_SITE
name: Ribosome-bd_factorA_CS
description: Ribosome-binding factor A, conserved site
Protein sequence:
MAEFWASPYGFALSMLLQGLAVIAFVMGSLIFMVYGDRKIWAAVQMRRGPNVVGPWGLLQTFADALKYIVKEIVIPAGADKFVYFLAPFLSMMLALFAFVVIPFDEGWVMANINVGILFIFAASSLEVYGVIMGGWASNSKYPFLASLRSAAQMISYEVSLGLIIIGIIISTGSMNLTAIVEAQRGDYGLLNWYWLPHLPMVVLFFVSALAECNRPPFDLVEAESELVAGFMTEYSSTPYLLFMAGEYIAMYLMCALLSLLFFGGWLSPVPFIADGWWWMVIKMWFWFYMFAMVKAIVPRYRYDQLMRIGWKVFLPLSLGWVVLVAILARYEILGGFWARFAVGG

Annotated regions:
phrase: PFDLVEAESELVA
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_su1_CS
description: NADH:ubiquinone oxidoreductase, subunit 1, conserved site

phrase: GLLQTFADALKYIVK
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_su1_CS
description: NADH:ubiquinone oxidoreductase, subunit 1, conserved site
Protein sequence:
MVKEFLGEGSQAGQNLLRLVSRGNAIIAELLRLSAHIPSVFKLEDRNEARKYQDILLDFKYLSNPDFYESKIEENADLVDLETEFRDNHIDILIRFYHLFESIYKYIMDLEHYIVDVEKGFYIHLTIEAILINGDGKQLLSEAVYLYGVMLILMDNLIEGPVRERMLISYLRNKGPVDLPLIDEVCKLCKSTGYIPGSPKKPPNYPEEYFRRVELPENVISMIVGRLRSDDLYNGTESFPQPEHRSVALSTQACMIYVILYFIPDILNNKNSIMREIVDKFFPDNWVISFFLGFTIDLSVAWEPYKAAKTAMGNTIIQSNIQYQTQRFWKEVSELNKLVDDLLVDGLLVEEYIVDNVHKIITTLRRCNVTIRWVMLHSNASQKKFKDLVLMGGSQEDVLYLLLNTAQLEFVFKNIFQQLLATKEEKWEENKKLASDSMVELSEYFSGEKALTRVKKNENLQKWFGEISQKISQLDSTDSTSTGRKIQQLSLALEEVEQFQQIDSSIQVKQFLIETRQFLTKMIKIVNIKEEVLVNLSVCADMSYAWEIVNNYVDQMQKGIKSDPKCVLKLRATFLKLVSILDLPLVRIAQCSSPDLISVSEYYSGELVGYVRKVLEIVPKQMFLILKQIINMQTNNIQEMPTKVEKERLRDFAQLDQRYDLARATHSVSVFTEGILAMETTLVGIIEVDPKQLLEDGIRKELVLQIALAMDKTLIFSGKPYQAPSNKQQQQEIELLQRLKELSNILDGFRRSFQYIQDYVNIQGLKIWQEEFSRIVNFYVEQECNSFLKKKVYDWQSQYQSVAIPIPKFPSQSDQNSQQSVNMIGRLARELLNQTNCKTTLYLNQIGWFDPSSGKELVGINTWSILHQSVGIFGLTGLDKLFSFMMVKDLQVFVSQTRSLVEKSLKGFLNEFEDYLRPTTNIPDTMIRYQQALDKTKLLYPIFIDVLTKIGQIQLIRRQISNQLNFHCKIDSNMLFSSLDIMNKSLLNDIESHFQRPDSNPYPSDDNTLLFDLAQYLDTAGINDPFTKIYITTSPLEQFPCLLFLFVLSQVSKFQFNSKLNVMSSKKQKNSYDWTPFIIGCITILQQFHSLHTQKFLAFVGQYIKSHINIALANPKENNKDDADYPEDVIGLLRFLEDFCKYSHTSRKIVEGYVPPYIFDYYNN

Annotated regions:
Protein sequence:
MKGISVLGATGSIGTQTLDVLANHRDKFRLVAMSVGKNLTLAEEQIHQFKPPLVSVMTDEDRKTLASKVPEGTRVVCGEEGLIEVATAEKAEILVNAVIGSVGLAPTLAAIEAKKTIALANKETLVTAGHLVTEKAREHGVKLLPVDSEHSAIFQALQGERMDRLHRIIITASGGSFRDKSRDELNGVTVEDALKHPNWSMGAKITIDSATMMNKGLEVIEAHWLFNLPYEKIDVLLHKESIIHSMVEFVDRSVIAQLGTPDMRVPIQYALSYPDRLEFHEGQQLNLWEVGKLHFAPLDMERFRCMAFAYESGKQGGTMPTVLNAANEEAVELFLNNQLSFLGIEDVIEKALERHERIDSPSLADILHVDQETRAFVHSLIK

Annotated regions:
phrase: LGTPDMRVPIQYALSYPDRLEFHEGQQLNLWEVGKLHFAPLDMERFRCMAFAYESGKQGGTMPTVLNAANEEAVELFLNNQLSFLGIEDVIEKALERHERIDSPSLADILHVDQETR
type: DOMAIN
name: DXPR_C
description: DXP reductoisomerase, C-terminal domain

phrase: ISVLGATGSIGTQTLDVLANHRDKFRLVAMSVGKNLTLAEEQIHQFKPPLVSVMTDEDRKTLASKVPEGTRVVCGEEGLIEVATAEKAEILVNAVIGSVGLAPTLAAIEAKKTIALANKETLVTA
type: DOMAIN
name: DXP_reductoisomerase_N
description: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal

phrase: LLPVDSEHSAIFQALQGERMDRLHRIIITASGGSFRDKSRDELNGVTVEDALKHPNWSMGAKITIDSATMMNKGLEVIEAHWL
type: DOMAIN
name: DXP_reductoisomerase_C
description: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal
Protein sequence:
SGGFDFSFLPQPPQEKHDGGRYYLGPGPMGLMGPRGPPGASGAPGPQGFQGPAGEPGEPGQTGPAGARGPAGPPGKAGGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGELGPVGSTGPSGPAGPRGEQGLPGVSGPVGPPGNPGANGLTGAKGAAGLPGVAGAPGLPGPRARGLVGEPGPAGSKGESGGEPGSAGPQGPPGSSGEEGKRGPSGESGSTGPTGPPGLRGGPGSRAGVIGPAGARGASGPAGVRGRPGEPGLMGARGLPGSPGNVGPAGKEGPVGLPGIDGRPGPIGPAGARGEAGNIGFPGPKGPAGDPGKAGEKGAGNRGAPGPDGNNGAQGPPGLQGVQGGKGEQGPAGPPGFQGLPGPAGTTGEAGKPGERGIPGEFGLPGPAGPRGERGPPGESGAVGPSGAIGSRGPSGPPGPDGNKGEPGVVGAPGGSGGLPGERGAAGIPGGKGEKGETGLRGEVGTTGRDGARGAPGAVGAPGPAGATGDRGEAGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGPAGAAGQPGAKGERGTKGPKGENGIVGPTGPVGSAGPAGPNGPAGPAGSRGDGGPPGATGFPGAAGRTGPPGPSGITGPPGPPGAAGKEGLRGPRGDQGPVGRGETGAGGPPGFTGEKGPSGEPGTAGPPGTAGPQGLLGAPGILGLPGSRGERGLPGVAGAVGEPGPLGIGPPGARGGRDGNPGSDGPPGRDGLPGHKGYAGNGPVGAAGAPGPHGVGPAGKHGNRGEPGPVGSVGPVGALGPRGPSGPQGIRGDKGEPGDKGPRGLPGLKGHNGLQGLPGLAGHHGDQGAPGPVGPAGPRGPAGPSGPAGKDGRTGHPGAVGPAGIRGSQGSQGPSGPPGPPGPPGPPGASGGGYDFGYEGDFYRA

Annotated regions:
phrase: PGPMGLMGPRGPPGASGAPGPQGFQGPAGEPGEPGQTGPAGARGPAGPPGKA
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: VGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQTG
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: GDRGEAGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGPAGAAGQPGAKGERGTKGPKG
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: GIPGEFGLPGPAGPRGERGPPGESGAVGPSGAIGSRGPSGPPGPDGNKGEPGVVGAP
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: SGGLPGERGAAGIPGGKGEKGETGLRGEVGTTGRDGARGAPGAVGAPGPAGATGDRG
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: GAPGPDGNNGAQGPPGLQGVQGGKGEQGPAGPPGFQGLPGPAGTTGEAGKPGERGIP
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: GPAGPRGPAGPSGPAGKDGRTGHPGAVGPAGIRGSQGSQGPSGPPGPPGPPGPPGAS
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: GPAGKEGPVGLPGIDGRPGPIGPAGARGEAGNIGFPGPKGPAGDPGKAGEKG
type: REPEAT
name: Collagen
description: Collagen triple helix repeat
Protein sequence:
MTKKELIDRVAKKAGAKKKDVKLILDTILETITEALAKGEKVQIVGFGSFEVRKAAARKGVNPQTRKPITIPERKVPKFKPGKALKEKVK

Annotated regions:
phrase: GFGSFEVRKAAARKGVNPQ
type: CONSERVED_SITE
name: Histone-like_DNA-bd_CS
description: Histone-like DNA-binding protein, conserved site
Protein sequence:
MRWSFLTVLLWLVSLTGAENGFNGWLRYAPVQCDKRCQRALPSSIVTLNSTDSGPIGTASQELQAGLENIVGKQLSIKRSSCGSRSSILVATLEQYRQACNRSSEVPSLGIDGFWLRAYGDTVQIVGENERGALYGAFEYLSLLAQGNFSHVDYTTSAHAPVRWVNQWDNMDGSIERGYAGPSIFFEDGHIVEDLSRVKQYARLLASIRINGVIVNNVNANATLLTSQNMDGLARIANVFRPYGIQIGISLNFASPDTLGGLGTYDPLDPSVISWWANITDSLYDRVPDMAGYLVKASSEGQPGPDTYNRTLAEGANVFAKALQPHGGILMFRTFVYDHHINESIWTNDRANAQVDFFKELDGQFEDNIKYGPIDFQVREPVSPLFANLYKTNMAIELQVTQEYLGQQDHLVYLSPLWKELLDFDLRVDHQPSLVRDIVSGQRFDRQLGGWAAVVNVGTNTTWLGSHLAMSNLYAYGRLAWSPTDDSQGILQDWIRLTFGRDQNVLDAITDMSMASWPAYENYTGNLGIQTLTDILYTHYGPNPASQDNNGWGQWTRADHDTIGMDRTVKNGTGNAGQYPAEIAQVYEDLDSTPDDLLLWFHHVPYTHRLHSGKTVIQHFYDAHYDGAETAHRFLSQWESLKGRIDQQRYNEVLSRLVYQAGHSLVWRDAINNFYWNMSGISDEKNRLGHHPWRVEAESMTLDGYEPYTVSPFETASNYKAVVTTSNSTTGTAQTKLQFPSGTYDLGVNYYDMYGGKSEWTVYVNDRVVGQWEGNSENTLGHTPSIYIDGHSATRITFRGVEIENGDQLKIVGVPDGVEPAPLDYVVLLPPDVVD

Annotated regions:
phrase: NFSHVDYTTSAHAPVRWVNQWDNMDGSIERGYAGPSIFFEDGHIVEDLSRVKQYARLLASIRINGVIVNNVNANATLLTSQNMDGLARIANVFRPYGIQIGISLNFASPDTLGGLGTYDPLDPSVISWWANITDSLYDRVPDMAGYLVKASSEGQPGPDTYNRTLAEGANVFAKALQPHGGILMFRTFVYDHHINESIWTNDRANAQVDFFKELDGQFEDNIKYGPIDFQVREPVSPLFANLYKTNMAIELQVTQEYLGQQDHLVYLSPLWKELLDFDLRVDHQPSLVRDIVSGQRFDRQLGGWAAVVNVGTNTT
type: DOMAIN
name: Glyco_hydro_67_cat
description: Glycosyl hydrolase family 67, catalytic domain

phrase: GWLRYAPVQCDKRCQRALPSSIVTLNSTDSGPIGTASQELQAGLENIVGKQLSIKRSSCGSRSSILVATLEQYRQACNRSSEVPSLGIDGFWLRAYGDTVQIVGENERGALYGAFE
type: DOMAIN
name: Glyco_hydro_67_aGlcAse_N
description: Alpha glucuronidase, N-terminal

phrase: GSHLAMSNLYAYGRLAWSPTDDSQGILQDWIRLTFGRDQNVLDAITDMSMASWPAYENYTGNLGIQTLTDILYTHYGPNPASQDNNGWGQWTRADHDTIGMDRTVKNGTGNAGQYPAEIAQVYEDLDSTPDDLLLWFHHVPYTHRLHSGKTVIQHFYDAHYDGAETAHRFLSQWESLKGRIDQQRYNEVLSRLVYQAGHSLVWRDAINNFYWNMSGISDEKN
type: DOMAIN
name: Glyco_hydro_67_C
description: Glycosyl hydrolase family 67, C-terminal
Protein sequence:
MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKKSGDIKDQHFTDIISYLNEGDALVLNDTRVLPARLHGIKDETGAHIEVLLLKQKEGNAWETLVKPAKRIRKGATITFGDGALKAICLEELEHGGRILEFSYEGIFYEVLEQLGEMPLPPYIKEQLADQDRYQTVYAKENGSAAAPTAGLHFTEDLLAKISAKGVEIIFVTLHVGLGTFRPVDVEDTANHKMHSEFYRLTEESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESGWTEIFISPGYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEEQYRFFSFGDAMFIH

Annotated regions:
Protein sequence:
MAFPPIILASQSPRRKEILQLSGLSFSTVSIETPEHLDPAESIESNVRRIAEEKAKAAIQSFQNDTRDPVLLGADTVVAIDGRILGKPANAAEALEMLLQLQGRTHEVHTGFALLQSAHLYSECATTEVTLNKMTEEEILHYINTAAPFDKAGSYGIQDPVMACFVSSITGCYYNVMGLPLSRVWMALQKLRS

Annotated regions:
Protein sequence:
MALVSQARSLGKYFLLLDNLLVVLGFFIVFPLISIRFVDQLGWAAVLVGLALGLRQLVQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFALMAMADEPWILWLACALSGLGGTLFDPPRTALVIKLTRPHERGRFYSLLMMQDSAGAVIGALIGSWLLQYDFHFVCWTGAVIFILAAGWNVWLLPAYRISTVRAPMKEGLMRVLRDRRFVTYVLTLTGYYMLSVQVMLMLPIVVNEIAGSPAAVKWMYAIEAALSLTLLYPIARWSEKRFRLEQRLMFGLLIMTLSLFPVGLITHLQTLFMFICFFYMGSIIAEPARETLSASLADSRARGSYMGFSRLGLALGGALGYTGGGWMYDTGRTLEMPELPWFLLGVIGLITLVGLYWQFNQRRIESAMLSGS

Annotated regions:
phrase: VSQARSLGKYFLLLDNLLVVLGFFIVFPLISIRFVDQLGWAAVLVGLALGLRQLVQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFALMAMADEPWILWLACALSGLGGTLFDPPRTALVIKLTRPHERGRFYSLLMMQDSAGAVIGALIGSWLLQYDFHFVCWTGAVIFILAAGWNVWLLPAYRISTVRAPMKEGLMRVLRDRRFVTYVLTLTGYYMLSVQVMLMLPIVVNEIAGSPAAVKWMYAIEAALSLTLLYPIARWSEKRFRLEQRLMFGLLIMTLSLFPVGLITHLQTLFMFICFFYMGSIIAEPARETLSASLADSRARGSYMGFSRLGLALGGALGYTGGGWMYDTGRTLEMPELPWFLLGVIGLITLVGLYWQFNQR
type: DOMAIN
name: MFS_dom
description: Major facilitator superfamily domain
Protein sequence:
MTKLTQQDAWAQLEAQAAKLPHMRELFEADPQRFDKMSLSACGLLLDYSKNRADEQTLEQLFKLAKSAGLSDKIHAMFDGEIINNTEKRAVLHTALRAEADEVILVDGQNIVPEVKQTQAKMAKFVEAVTSGEWKGYTGKAITDIVSIGIGGSFLGPKIVTQALRPYWNPALKCHFVANVDATSLCEKLRLVDPETTLFVMSSKSFGTQETLTNTLSAKAWFLKNGGTQVDIAKHFVAVTSNVAKATEFGMDADNIFPMWDWVGGRYSLWSAIGLPIALLIGMDNFYQLLAGAKSMDKHFVEAPLEQNMPVIMGLFSLLYGNFYQAQSHVVLTYDHYLRGLPAYFQQLDMESNGKSVTLNGDNVDHATGPVIWGGEGTNGQHAYHQLLHQGTALIPADFILPLQSHNPLGEHHVQLASNCFGQTQALMQGRTFDEALAELDGSSQSQEEKALIAKHKVMEGNKPSNTLLMDKLTPETLGALIALYEHRTFVQGAIWDINSFDQWGVELGKTLGNDVLARLQSDEEAKALDASSNALINLFRRGHL

Annotated regions:
phrase: KQTQAKMAKFVEAVTSGEWKGYTGKAITDIVSIGIGGSFLGPKIVTQALRPYWNPALKCHFVANVDATSLCEKLRLVDPETTLFVMSSKSFGTQETLTNTLSAKAWFLKNGGTQVDIAKHFVAVTSNVAKATEFGMDADNIFPMWDWVGGRYSLWSAIGLPIAL
type: DOMAIN
name: SIS_PGI_1
description: Phosphoglucose isomerase, SIS domain 1

phrase: QSHVVLTYDHYLRGLPAYFQQLDMESNGKSVTLNGDNVDHATGPVIWGGEGTNGQHAYHQLLHQGTALIPADFILPLQSHNPLGEHHVQLASNCFGQTQALMQGRTFDEALAELDGSSQSQEEKALIAKHKVMEGNKPSNTLLMDKLTPETLGALIALYEHRTFVQGAIWDINSFDQWGVELGKTLGND
type: DOMAIN
name: SIS_PGI_2
description: Phosphoglucose isomerase, SIS domain 2

phrase: GAIWDINSFDQWGVELG
type: CONSERVED_SITE
name: Phosphoglucose_isomerase_CS
description: Phosphoglucose isomerase, conserved site

phrase: DWVGGRYSLWSAI
type: CONSERVED_SITE
name: Phosphoglucose_isomerase_CS
description: Phosphoglucose isomerase, conserved site
Protein sequence:
MFIVSRLKDLTIITNRLRHYFRNMDVKELQPPSSVRGMQELQREQFRKIVQVPRLRVPESQVQRVMPLVKKFLLKMEHLHPVRAVDQSREILLHPTPVKNWDSLPTEDLQRQKVNAENFSFADLELRYENWSANEILKSVLPTEEEGLTSYSRIGHIAHLNLRDHLLPYKQLIGQVLRDKLPNCRTVVNKASSIDNTYRNFQLELICGDPDYQVETKENGVPFEFDFSKVYWNPRLSTEHERIVKMLKSDDVLYDVFAGVGPFSIPAAKKRCHVLANDLNPESFRWLQHNAKRNKCLPNIKMSNKDGRQFIVEELREDLLKRLCTTDTTTYGIHITMNLPAMAVEFLDAFRGLYSADELAQLPTNVCYPTVHVYSFAKGENTKELVRQLVESNLGASLDENLLQGINFVRNVAPNKDMYRVSFKLSLNMLTTLKEVEVTRKRYAEEELEVATKVKCV

Annotated regions:
phrase: YSRIGHIAHLNLRDHLLPYKQLIGQVLRDKLPNCRTVVNKASSIDNTYRNFQLELICGDPDYQVETKENGVPFEFDFSKVYWNPRLSTEHERIVKMLKSDDVLYDVFAGVGPFSIPAAKKRCHVLANDLNPESFRWLQHNAKRNKCLPNIKMSNKDGRQFIVEELREDLLKRLCTTDTTTYGIHITMNLPAMAVEFLDAFRGLYSADELAQLPTNVCYPTVHVYSFAKGENTKELVRQLVESNLGASLDENLLQGINFVRNVAPNKDMYRVSFKLS
type: DOMAIN
name: MeTrfase_TRM5/TYW2
description: SAM-dependent methyltransferase TRM5/TYW2-type

phrase: NEILKSVLPTEEEGLTSYSRIGHIAHLNLRDHLLPYKQLIGQVLRDKLPNCRTVVNKASSIDNTYRNFQLELICG
type: DOMAIN
name: TRM5/TYW2-like_N
description: TRM5/TYW2-like, N-terminal domain

phrase: ETKENGVPFEFDFSKVYWNPRLSTEHERIVKMLKSDDVLYDVFAGVGPFSIPAAKKRCHVLANDLNPESFRWLQHNAKRNKCLPNIKMSNKDGRQFIVEELREDLLKRLCTTDTTTYGIHITMNLPAMAVEFLDAFRGLYSADELAQLPTNVCYPTVHVYSFAKGENTKELVR
type: DOMAIN
name: TRM5-TYW2-like_MTfase
description: TRM5/TYW2-like, methyltransferase domain
Protein sequence:
MLSNPQRTRFRKQHRGRMKGISYRGNHICFGRYALQALEPAWITSRQIEAGRRAMSRNVRRGGQIWVRIFPDKPVTVRPTETRMGSGKGFPEYWVAVVKPGKILYEMGGVPENIARKAISIASSKMPIRTQFIISG

Annotated regions:
phrase: RGNHICFGRYALQALEPAWITSRQIEAGRRAMSRNVRRGGQIWVRIFPDKPVTVRPTETRMGSGKGFPEYWVAVVKPGKILYEMGGVPENIARKAISIASSKMPIRTQF
type: DOMAIN
name: Ribosomal_uL16_dom
description: Large ribosomal subunit protein uL16 domain

phrase: RMGSGKGFPEY
type: CONSERVED_SITE
name: Ribosomal_uL16_CS
description: Large ribosomal subunit protein uL16, conserved site

phrase: RRGGQIWVRIF
type: CONSERVED_SITE
name: Ribosomal_uL16_CS
description: Large ribosomal subunit protein uL16, conserved site
Protein sequence:
MPLADISQAIEAYARGEFLVVVDDEDRENEGDLIIAADAMTPEKMTFMIRHTSGVICAPMSDGRADELDLPLMVVDNTESMRTAFTVTVDLVAGTSTGISAADRSATVVALADSARVRTEFARPGHIFPLRARVGGVLKRAGHTEAAVDLCAMADRAPVGVLCEIVNDDGSMARVPDLEVFAEEHGLLFITIADLIRYRRRHEKLVEHFAAARIPTRYGDFTAHAYRSTLDEDEHVAYVLGDLSTVDDPLVRVHSECLTGDLLGSIRCDCGSQLDAALEGIGEEGVGVLVYLRGHEGRGIGIGHKLRAYELQDEGYDTVDANLQQGLPVDSREYGVGAQILSDLGVNKMRLMTNNPVKYGGLEGYGLDVVGRVPLQIEPNPENIRYLKTKRERLGHFLENDGDETESA

Annotated regions:
phrase: AAARIPTRYGDFTAHAYRSTLDEDEHVAYVLGDLSTVDDPLVRVHSECLTGDLLGSIRCDCGSQLDAALEGIGEEGVGVLVYLRGHEGRGIGIGHKLRAYELQDEGYDTVDANLQQGLPVDSREYGVGAQILSDLGVNKMRLMTNNPVKYGGLEGYGLDVVGRV
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MIGRISGQLAEKNPPEVLVDCNGVGYEVLVPMSTFYNLPGLGEKVSLLTHFVVREDAQILYGFGSATERAAFRQLIKISGVGPRTALSVLSGMSVEELAQAVTHQEAGRIIKVPGIGKKTAERLLLELKGKLGADIGVQVSVSSDSQSDILQALVALGYSDRDAALALKALPKDIGVSDGIKLALKALAK

Annotated regions:
phrase: RQLIKISGVGPRTALSVLS
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: GRIIKVPGIGKKTAERLLL
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: MIGRISGQLAEKNPPEVLVDCNGVGYEVLVPMSTFYNLPGLGEKVSLLTHFVVREDAQILY
type: DOMAIN
name: DNA_helicase_Holl-junc_RuvA_I
description: DNA helicase, Holliday junction RuvA type, domain I, bacterial

phrase: QSDILQALVALGYSDRDAALALKALPKDIGVSDGIKLALKA
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal

phrase: LQALVALGYSDRDAALALKALPKDIGVSDGIKLAL
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal
Protein sequence:
MVLSKTASKSDDSIHSTFASRYVRNSISRFEIPKNSIPKEAAYQIINDELKFDGNPRLNLASFVTTWMEPECDKLMMESINKNNVEMDQYPVTTDLQNRCVNMIARLFNAPLGDGEAAIGVGTVGSSEAVMLAGLAFKRQWQNKRKALGLPYDRPNIVTGANIQVCLEKFARYFEVELKEVKLREGYYVMDPDKAVEMVDENTICVVAILGSTLTGEFEDVKLLNDLLVEKNKKTGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRTKTDLPDELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMDNCRENMMVLRQGLEKTGRFNIVSKENGVPLVAFSLKDSSRHNEFEVAEMLRRFGWIVPAYTMPADAQHVTVLRVVIREDFSRTLAERLVADFEKVLHELDTLPARVHAKMASGKVNGVKKTPEETQREVTAYWKKFVDTKTDKNGVPLVASITNQ

Annotated regions:
Protein sequence:
MNQVAVVIGGGQTLGAFLCHGLAAEGYRVAVVDIQSDKAANVAQEINAEYGESMAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYSAGIAKAAFISDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDKVPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGGQVMF

Annotated regions:
phrase: SKSGKVGSKHNSGYSAAKFGGVGLTQSL
type: CONSERVED_SITE
name: Sc_DH/Rdtase_CS
description: Short-chain dehydrogenase/reductase, conserved site
Protein sequence:
MSSNSFLTPRIVEVHNISPLHAKVVMEPFEHGFGYTLGNALRRVLLSSIPGCAPTKVSISGVVHEYSTIDGLQEDVVDLILNLKGVVLKLHNNKTQSVLTLKKSSEGIVTAGDIEATHDVEIVNPDHVIAHITSGGKIEAQITVEKGRGYWPSANRSKEDKSSSSIGDILLDASFSPIRRVSYAVESARVEQRTDLDKLIIDIETNGSVDPEEAIRYAAKVLVEQFSFFADLESTPLPTEQPKAPVIDPILLRPVDDLELTVRSANCLKVENIFYIGDLIQRTEAELLRTPNLGRKSLNEIKEVLASRDLSLGMKLENWPPANLENYIKEPGHASS

Annotated regions:
phrase: PILLRPVDDLELTVRSANCLKVENIFYIGDLIQRTEAELLRTPNLGRKSLNEIKEVL
type: DOMAIN
name: RNAP_asu_C
description: RNA polymerase, alpha subunit, C-terminal

phrase: VSISGVVHEYSTIDGLQEDVVDLILNLKGVVLKLHNNKTQSVLTLKKSSEGIVTAGDIEATHDVEIVNPDHVIAHITSGGKIEAQITVEKGRGYWPSANRSKEDKSSSSIGDILLDASF
type: DOMAIN
name: DNA-dir_RNA_pol_insert
description: DNA-directed RNA polymerase, insert domain

phrase: HAKVVMEPFEHGFGYTLGNALRRVLLSSIPGCAPTKVSISGVVHEYSTIDGLQEDVVDLILNLKGVVLKLHNNKTQSVLTLKKSSEGIVTAGDIEATHDVEIVNPDHVIAHITSGGKIEAQITVEKGRGYWPSANRSKEDKSSSSIGDILLDASFSPIRRVSYAVESARVEQRTDLDKLIIDIETNGSVDPEEAIRYAAKVLVEQFSFFAD
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: EPFEHGFGYTLGNALRRVLLSSIPGCAPTKVSISGVVHEYSTIDGLQEDVVDLILNLKGVVLKLHNNKTQSVLTLKKSSEGIVTAGDIEATHDVEIVNPDHVIAHITSGGKIEAQITVEKGRGYWPSANRSKEDKSSSSIGDILLDASFSPIRRVSYAVESARVEQRTDLDKLIIDIETNGSVDPEEAIRYAAKVLVEQ
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type