nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTAVTPDGRKLLRIEARNAQVPIERKPAWIRTRARMGPQYHALKELVRREGLHTVCEEAGCPNIFECWEDREATFLIGGDTCSRNCSFCQISSGRPQPLDRDEPRRVAESVARMGLRYATVTGVTRDDLDDEGAWLYAQTVREIHHAVPGCGVELLTPDFHGRPELLDEVFSARPEVFAHNIETVPRIFKSIRPGFRYERSLDVLRAAHDAGLVTKSNLILGLGETRQEIRAALADLRSAGCDLVTITQYLRPSIRHHPVVRWVEPAEFEELAAEARELGFAGVMSGPLVRSSYRAGRLYRAAIASRTDRRTDGATTQAPQTP

Annotated regions:
phrase: EATFLIGGDTCSRNCSFCQISSGRPQPLDRDEPRRVAESVARMGLRYATVTGVTRDDLDDEGAWLYAQTVREIHHAVPGCGVELLTPDFHGRPELLDEVFSARPEVFAHNIETVPRIFKSIRPGFRYERSLDVLRAAHDAGLVTKSNLILGLGETRQEIRAALADLRSAGCDLVTITQYLRPSIRHHPVVRWVEPAEFEELAAEAR
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: ERKPAWIRTRARMGPQYHALKELVRREGLHTVCEEAG
type: DOMAIN
name: LIAS_N
description: Lipoyl synthase, N-terminal

phrase: GDTCSRNCSFCQISSGRPQPLDRDEPRRVAESVARMGLRYATVTGVTRDDLDDEGAWLYAQTVREIHHAVPGCGVELLTPDFHGRPELLDEVFSARPEVFAHNIETVPRIFKSIRPGFRYERSLDVLRAAHDAGLVTKSNLILGLGETRQEIRAALA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: WEDREATFLIGGDTCSRNCSFCQISSGRPQPLDRDEPRRVAESVARMGLRYATVTGVTRDDLDDEGAWLYAQTVREIHHAVPGCGVELLTPDFHGRPELLDEVFSARPEVFAHNIETVPRIFKSIRPGFRYERSLDVLRAAHDAGLVTKSNLILGLGETRQEIRAALADLRSAGCDLVTITQYLRPSIRHHPVVRWVEPAEFEELAAEARELGF
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MAAAKGKKGAKAPSTKKSDYYKVEGNSVTRTKKACPKCGAGVFMAEHLNRYACGKCGFLEYKKNEKTEEQE

Annotated regions:
phrase: KSDYYKVEGNSVTRTKKACPKCGAGVFMAEHLNRYACGKCGF
type: DOMAIN
name: Ribosomal_eS31
description: Small ribosomal subunit protein eS31

phrase: DYYKVEGNSVTRTKKACPKCGAGVFMAEHLNRYACGKC
type: DOMAIN
name: Ribosomal_eS31
description: Small ribosomal subunit protein eS31
Protein sequence:
MTFAAAQATYVLHSRPYKETSALVDFFTAQGRLRAVLRGARGKAGALARPFVPLEAEWRGRGELKTVARLESAGIPNLLSGQALFSGLYLNELLIRLLPAEDPQPEIFAHYAATLPLLAAGRPLEPLLRAFEWRLLEQLGYGFALDVDIHGRPIEPQALYQLLPEAGLEPVTQLQPGLFQGVELLSMADADWSAPGALAAAKRLMRQALAPHLGGRPLVSRELFMNRKESPRD

Annotated regions:
phrase: TYVLHSRPYKETSALVDFFTAQGRLRAVLRGARGKAGALARPFVPLEAEWRGRGELKTVARLE
type: DOMAIN
name: DNA_rep/recomb_RecO_N
description: DNA replication/recombination mediator RecO, N-terminal
Protein sequence:
MTQYTPMIQQYLKVKADYQDAFLFFRLGDFYEMFFEDAVKAAHELEITLTSRDGGSSERIPMCGVPYHAAKNYIEQLVEKGYKVAVCEQVEDPKTAKGVVRREVVQLITPGTMMEGRTIDEKENNFLAALTHFEDGSYALACNDLTTGQNTVTLLTGSVEDILLEVYATGSKEIVVDSSFSKDELNKLTETLKMTISYEDATAIPEGLEHLVKNVSQAKLIKAVGRLFNYVIRTQKRSLDHLQPVEIYYTNQFMKIDVHSKRNLELTETLRTKEKTGSLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKLKEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQGADPCESLTELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLKIGYNRIFGYYIEVTKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFATVSEEEQFVKPVLTTKREIFIKDGRHPVVEKVLNGKLYVPNDCIMPENMDVFLITGPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEDSLDQLKNVHVSAIEENGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQLEGQEEIVIPKRVEVKEQEVIPEPVVVKEEPVAIEETKVDNEEESQLSFFGTEQSSKKQDKPVLDAKETAVLTQIKKIDLLDMTPLEAMNELYRLQKKLKKG

Annotated regions:
phrase: LITGPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEDSLDQLKNVHVSAIEENGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVLAQL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: EKTGSLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKLKEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQGADPCESLTELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLKIGYNRIFGYYIEVTKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSFATVSEEEQFVKPVLTTKREIFIKDGRHPVVEK
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: GYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLKIGYNRIFGYYIEVTKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEE
type: DOMAIN
name: DNA_mismatch_repair_MutS_clamp
description: DNA mismatch repair protein MutS, clamp

phrase: TPMIQQYLKVKADYQDAFLFFRLGDFYEMFFEDAVKAAHELEITLTSRDGGSSERIPMCGVPYHAAKNYIEQLVEKGYKVAVCEQVEDPKTAKGVVRREVVQLITPGTMM
type: DOMAIN
name: DNA_mismatch_repair_MutS-lik_N
description: DNA mismatch repair protein MutS-like, N-terminal

phrase: SLILFDEIGRGTSTYD
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: KRNLELTETLRTKEKTGSLLWLLDKTKTAMGGRMLKQWMERPLIQKERIEERLEMVETFVNDYFLREDLKEKLKEVYDLERLAGKVAFGNVNARDLLQLRRSLLQVPAILEAISLLDNAYAARLIQGADPCESLTELLGRSIQENPPLSIKDGDIIKDGYNDKLDQYRYVSKNGKTWIAELEKRERDITGIKSLKIGYNRIFGYYIEVTKANLGALPEGRYERKQTLANAERFITDELKEKETLILEAEEKIVQLEYDLFTALREEVKVFIPKLQHLAKVISELDVLQSF
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: MDVFLITGPNMSGKSTYMRQLALVTVMSQIGCFVPATEAVLPVFDQIFTRIGAADDLISGQSTFMVEMLEAKNAIANASERSLILFDEIGRGTSTYDGMALAQAIIEHIHDQIGAKTLFSTHYHELTVLEDSLDQLKNVHVSAIEENGKVVFLHKIQDGAADKSYGIHVAQLAELPDSLIARAKEVL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: NFLAALTHFEDGSYALACNDLTTGQNTVTLLTGSVEDILLEVYATGSKEIVVDSSFSKDELNKLTETLKMTISYEDATAIPEGLEHLVKNVSQAKLIKAVGRLFNYVIRTQKRSLDHL
type: DOMAIN
name: DNA_mmatch_repair_MutS_con_dom
description: DNA mismatch repair protein MutS, connector domain
Protein sequence:
MYKENKNKLEILLKKVANEWDLKICSINIQTNQNPTVVKIIIKKTNGDDISLEDCALFNAPASEEIENSNLLNCSYVLEISSQGVSDELTSDRDFKTFKGFPVNVQLNQKNSKKKFLNGLLYEKSNDYLAINIKGKIKKIPFDEVLKISLCTLKD

Annotated regions:
phrase: LKKVANEWDLKICSINIQTNQNPTVVKIIIKKTNGDDISLEDCALFNAPASEEIENSNLLNCSYVLEISSQG
type: DOMAIN
name: RimP_N
description: Ribosome maturation factor RimP, N-terminal
Protein sequence:
MTKTSKASGLSWFFCDLDGTLLRYQNNQHLIEPTTKRAVAQLVESGANFVVATGRKPSDVRNIYKELGIEQASPYLIANNGAVVWDLKRNSYLNKQTLSLSDFDLIDHINQTLNQLNHEYGCILYGLNDQVYFYHIHAPDSQAFKQYFAFYEGEFVQNQYLEIDGLKTEYNLVKAIWFFKEVHQQKAVIAQHFTNQERLVITSAHSFELVPLNVSKGHAINLIKQQVKITDNQIMVLGDSYNDLPMFQHGVVKVTNHLAPDNLKQLATRVYELPASLFVGQALNDYFKFD

Annotated regions:
Protein sequence:
MMLKGKHIILGITGGIAAYKSVSLLRLFVKAGAEVQVVITPAGKEFITPVTLSALSGRPVISEFFTANTGQWNSHVDIGLWADAMVIAPATASTIAKMACGVADNMLVTTYLSAKAPVFVAPAMDLDMMAHPTTQRNIGLLRSYGNHVIDSRAGELASHLVGKGRMAEPEEILEAVDAFFDASASMKGLKVMITAGPTYEKIDPVRFIGNYSSGKMGYAIADEAARRGAEVTVVSGPVSVVPSEPGVRVIKVESAREMMEAAEHEFAGADVAVMAAAVADYAPVEPALSKIKREGGEPPVIRLVKNPDIAAALGERKRPGQTLVGFALETDHEMDNAADKMKRKHLDMIVLNSLRDKGAGFGTDTNLVTILSADGRTTRYDLKSKREVACDILDQICAMR

Annotated regions:
phrase: MKGLKVMITAGPTYEKIDPVRFIGNYSSGKMGYAIADEAARRGAEVTVVSGPVSVVPSEPGVRVIKVESAREMMEAAEHEFAGADVAVMAAAVADYAPVEPALSKIKREGGEPPVIRLVKNPDIAAALGERKRPGQTLVGFALETDHEMDNAADKMKRKHLDMIVLNSLRDKGAGFGTDTNLVTI
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal

phrase: KHIILGITGGIAAYKSVSLLRLFVKAGAEVQVVITPAGKEFITPVTLSALSGRPVISEFFTANTGQWNSHVDIGLWADAMVIAPATASTIAKMACGVADNMLVTTYLSAKAPVFVAPAMDLDMMAHPTTQRNIGLLRSYGNHVIDSRAGELASHLVGKGRMAEPEEILEAV
type: DOMAIN
name: Flavoprotein
description: Flavoprotein
Protein sequence:
MFSNQYIQQRIHKANSLREEGKNPYKNGLKRSLTNAAFLEKYAYVKGLEEPKDKEKCESVVGRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDEFKSLKKHLEVGDIVLVKGFPFATKTGELSIHALEFHILSKTIVPLPEKFHGLSDIELRYRQRYLDLIVNPGVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMMHPIPGGANARPFITYHNALEIERYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGMDHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLDSKIIYNDMEVDFNQTSVISYLDALETIGGISKGILEKEDRLLAYLLEQGIKVEPNLTHGKLLAEAFDHFVEHKLINPTFVTEYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHEMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAMRPVKNDFNVEGEE

Annotated regions:
phrase: IELRYRQRYLDLIVNPGVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMMHPIPGGANARPFITYHNALEIERYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGMDHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLDSKIIYNDMEVDFNQTSVISYLDALETIGGISKGILEKEDRLLAYLLEQGIKVEPNLTHGKLLAEAFDHFVEHKLINPTFVTEYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHEMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPA
type: DOMAIN
name: Aa-tRNA-synt_II
description: Aminoacyl-tRNA synthetase, class II (D/K/N)

phrase: EMEGFLEVET
type: DOMAIN
name: Lys-tRNA-synth_II_C
description: Lysyl-tRNA synthetase, class II, C-terminal

phrase: PGGANARPFITYHNAL
type: DOMAIN
name: Lys-tRNA-synth_II_C
description: Lysyl-tRNA synthetase, class II, C-terminal

phrase: LKRLIVGGFEAVF
type: DOMAIN
name: Lys-tRNA-synth_II_C
description: Lysyl-tRNA synthetase, class II, C-terminal

phrase: FRNEGMDHSHNPEFTMI
type: DOMAIN
name: Lys-tRNA-synth_II_C
description: Lysyl-tRNA synthetase, class II, C-terminal

phrase: NPTFVTEYPIEISPLA
type: DOMAIN
name: Lys-tRNA-synth_II_C
description: Lysyl-tRNA synthetase, class II, C-terminal

phrase: NPGVKDVFKKRSLIVSSVRKFFEMEGFLEVETPMMHPIPGGANARPFITYHNALEIERYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGMDHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLDSKIIYNDMEVDFNQTSVISYLDALETIGGISKGILEKEDRLLAYLLEQGIKVEPNLTHGKLLAEAFDHFVEHKLINPTFVTEYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHEMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAMR
type: DOMAIN
name: Lys-tRNA-synth_II_C
description: Lysyl-tRNA synthetase, class II, C-terminal

phrase: FKKRSLIVSSVRKFFEMEGFLEVETPMMHPIPGGANARPFITYHNALEIERYLRIAPELYLKRLIVGGFEAVFEINRNFRNEGMDHSHNPEFTMIEFYWAYHTYEDLIELSKRLFDYLLKTLNLDSKIIYNDMEVDFNQTSVISYLDALETIGGISKGILEKEDRLLAYLLEQGIKVEPNLTHGKLLAEAFDHFVEHKLINPTFVTEYPIEISPLARRNDSNPNIADRFELFIAGKEIANGFSELNDPLDQLERFKNQVAEKEKGDEEAQYMDEDYVWALAHEMPPTAGQGIGIDRLVMLLTGAKSIKDVILFPAMR
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: SVVGRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDEFKSLKKHLEVGDIVLVKGFPFATKTGELSIHALEFHILSKTIVPLPEKFHGLSDIELRYRQRYLD
type: DOMAIN
name: Lys-tRNA-ligase_II_N
description: Lysine-tRNA ligase, class II, N-terminal

phrase: SVVGRVKLLRLMGKACFIKIEDESAILQAYVSQNELNDEFKSLKKHLEVGDIVLVKGFPFATKTGELSIHALEFHI
type: DOMAIN
name: NA-bd_OB_tRNA
description: OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
Protein sequence:
MVQISQIGAVLAVCSTLTVAAPTKGKARFNVPQVAVPMKAVHHPAVAYARALHKFGMKVPKAVSDAARGSVPTTPTKDDEQYVTQVTVGQGKLNLDLDTGSGDLWVFSTETPKDQSQGHNLYMPTSKSKRLDGYSWEITYGDMSSAGGDVFLDTVSIGNVTASSQAVESAKKVSDQFAKDKATDGLMGLSFSVLNTVQPKPQTTFFDTVLKQLEKPLFTCTLKHGQPGSYDFGYIDDSKHSGEIAYTNVDNSQGWWGFTAESYSIGGGSNSTHSFHGAQHRGTRGSSIDGIADTGTTLMLLSDDVVQEYYGKVQGAKNDQQQGGWVFPCDAKLPDFTLSISGYNAVVPGKFMNYQAVGSVCFGGLQSVGSSGGVPNIFGDVFLKSQFVVWDTEGPRIGFAPQA

Annotated regions:
phrase: YVTQVTVGQGKLNLDLDTGSGDLWVFSTETPKDQSQGHNLYMPTSKSKRLDGYSWEITYGDMSSAGGDVFLDTVSIGNVTASSQAVESAKKVSDQFAKDKATDGLMGLSFSVLNTVQPKPQTTFFDTVLKQLEKPLFTCTLKHGQPGSYDFGYIDDSKHSGEIAYTNVDNSQGWWGFTAESYSIGGGSNSTHSFHGAQHRGTRGSSIDGIADTGTTLMLLSDDVVQEYYGKVQGAKNDQQQGGWVFPCDAKLPDFTLSISGYNAVVPGKFMNYQAVGSVCFGGLQSVGSSGGVPNIFGDVFLKSQFVVWDTEGPRIGF
type: DOMAIN
name: PEPTIDASE_A1
description: Peptidase family A1 domain

phrase: GIADTGTTLML
type: ACTIVE_SITE
name: Aspartic_peptidase_AS
description: Aspartic peptidase, active site

phrase: QYVTQVTVGQGKLNLDLDTGSGDLWVFSTETPKDQSQGHNLYMPTSKSKRLDGYSWEITYGDMSSAGGDVFLDTVSIGNVTASSQAVESAKKVSDQFAKDKATDGLMGLSFSVLNTVQPKPQTTFFDTVLKQLEKPLFTCTLKHGQPGSYDFGYIDDSKHSGEIAYTNVDNSQGWWGFTAESYSIGGGSNSTHSFHGAQHRGTRGSSIDGIADTGTTLMLLSDDVVQEYYGKVQGAKNDQQQGGWVFPCDAKLPDFTLSISGYNAVVPGKFMNYQAVGSVCFGGLQSVGSSGGVPNIFGDVFLKSQFVVWDTEGPRIGFA
type: DOMAIN
name: PEPTIDASE_A1
description: Peptidase family A1 domain

phrase: YVTQVTVGQGKLNLDLDTGSGDLWVFSTETPKDQSQGHNLYMPTSKSKRLDGYSWEITYGDMSSAGGDVFLDTVSIGNVTASSQAVESAKKVSDQFAKDKATDGLMGLSFSVLNTVQPKPQTTFFDTVLKQLEKPLFTCTLKHGQPGSYDFGYIDDSKHSGEIAYTNVDNSQGWWGFTAESYSIGGGSNSTHSFHGAQHRGTRGSSIDGIADTGTTLMLLSDDVVQEYYGKVQGAKNDQQQGGWVFPCDAKLPDFTLSISGYNAVVPGKFMNYQAVGSVCFGGLQSVGSSGGVPNIFGDVFLKSQFVVWDTEGPRIGFA
type: DOMAIN
name: Aspergillopepsin-like_cat_dom
description: Aspergillopepsin-like catalytic domain
Protein sequence:
MSDIALTVSVLALVAVVGLWIGNIKVRGVGFGIGGVLFGGIIVGHFVDQAGVTLSGDMLHFIQEFGLILFVYTIGIQVGPGFFASLRVSGLRLNLFAVLIVIMGGLVTAILHKIFAIPLPVVLGIFSGAVTNTPALGAGQQILRDLGTPVDLVDQMGMSYAMAYPFGICGILLTMWLMRLIFRVNVEAEAQKHESSLANGHSLIQTMNIRVENPNLNNMAIQDVPILNSDKIICSRLKRDDTLMVPSPGTIIQAGDLLHLVGQSTDLHNAQLVIGKEVDTSLSTRGTDLRVERVVVTNEKVLGKRIRDLHFKERYDVVISRLNRAGVELVASSDASLQFGDILNLVGRPASIDAVANVVGNAQQKLQQVQMLPVFIGIGLGVLLGSIPLFVPGFPVALKLGLAGGPLIMALILGRIGSIGKLYWFMPPSANLALRELGIVLFLAVVGLKSGGDFVDTLTQGEGLSWIGYGIFITAIPLITIGLLARIFAKMNYLTLCGMLAGSMTDPPALAFANNLHATSGAAALSYATVYPLVMFLRIITPQLLAVIFWGMG

Annotated regions:
phrase: KHESSLANGHSLIQTMNIRVENPNLNNMAIQDVPILNSDKIICSRLKRDDTLMVPSPGTIIQAGDLLHLVGQSTDLHNAQLVIG
type: DOMAIN
name: RCK_C
description: Regulator of K+ conductance, C-terminal

phrase: VFIGIGLGVLLGSIPLFVPGFPVALKLGLAGGPLIMALILGRIGSIGKLYWFMPPSANLALRELGIVLFLAVVGLKSGGDFVDTLTQGEGLSWIGYGIFITAIPLITIGLLARIFAKMNYLTLCGMLAGSMTDPPALAFANNLHATSGAAALSYATVYPLVMFLRIITPQLL
type: DOMAIN
name: YidE_YbjL
description: YidE/YbjL duplication

phrase: LALVAVVGLWIGNIKVRGVGFGIGGVLFGGIIVGHFVDQAGVTLSGDMLHFIQEFGLILFVYTIGIQVGPGFFASLRVSGLRLNLFAVLIVIMGGLVTAILHKIFAIPLPVVLGIFSGAVTNTPALGAGQQILRDLGTPVDLVDQMGMSYAMAYPFGICGILLTMWLM
type: DOMAIN
name: YidE_YbjL
description: YidE/YbjL duplication

phrase: VERVVVTNEKVLGKRIRDLHFKERYDVVISRLNRAGVELVASSDASLQFGDILNLVGRPASIDAVAN
type: DOMAIN
name: RCK_C
description: Regulator of K+ conductance, C-terminal

phrase: ENPNLNNMAIQDVPILNSDKIICSRLKRDDTLMVPSPGTIIQAGDLLHLVGQSTDLHN
type: DOMAIN
name: RCK_C
description: Regulator of K+ conductance, C-terminal

phrase: DTSLSTRGTDLRVERVVVTNEKVLGKRIRDLHFKERYDVVISRLNRAGVELVASSDASLQFGDILNLVGRPASIDAVANVVG
type: DOMAIN
name: RCK_C
description: Regulator of K+ conductance, C-terminal

phrase: VVGLWIGNIKVRGVGFGIGGVLFGGIIVGHFVDQAGVTLSGDMLHFIQEFGLILFVYTIGIQVGPGFFASLRVSGLRLNLFAVLIVIMGGLVTAILHKIFAIPLPVVLGIFSGAVTNTPALGAGQQILRDLGTPVDLVDQMGMSYAMAYP
type: DOMAIN
name: YidE_YbjL
description: YidE/YbjL duplication

phrase: GLGVLLGSIPLFVPGFPVALKLGLAGGPLIMALILGRIGSIGKLYWFMPPSANLALRELGIVLFLAVVGLKSGGDFVDTLTQGEGLSWIGYGIFITAIPLITIGLLARIFAKMNYLTLCGMLAGSMTDPPALAFANNLHATSGAAALSYATVYP
type: DOMAIN
name: YidE_YbjL
description: YidE/YbjL duplication
Protein sequence:
MSLDISQFPVLAQANTPNELRQLPQALLPQLADELREFLLKSVGMSSGHFASGLGTVELTVALHYVYNTPFDRLIWDVGHQAYPHKILTGRRDRMHTIRQKNGLHPFPWREESEYDTFSVGHSGTSISAALAMAVAAEKEQAGRKVVAVIGDGAMTGGMVFEAMNHAGDLHNDMLMVLNDNEMSISENVGALNNHLAQLMSGRLYTTIRESSKKVLKGMPVIKEMAKRTEEHLKGMVVPGTLFEELGFNYIGPIDGHDVDALVETLRNMRSLKGPQVLHIMTKKGRGYEPAEKDPIGWHAVPKFDPSQFKKPATKPGLPTFSQVFGKWLCDIAEQDEKVLGITPAMREGSGMVEFSQRFPKQYFDAAIAEQHAVTLGAGFACEGFKPVVAIYSTFLQRGYDQLIHDVALQRLPVLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSAVRYPRGSATGATQVEAMTALPIGKGVIKRLGKRIAMLNFGTTLAAALTAAESLDATVVDMRFVKPLDVDLVKEMAQTHDVLVTVEENAIMGGAGSGVLELLQKLKMPKPVLQIGLPDEFIKHGSPEEVTHDLQLDAEGMLAQINAFLAD

Annotated regions:
phrase: GADGPTHQGAFDLSFM
type: BINDING_SITE
name: Transketolase_BS
description: Transketolase binding site

phrase: GKGVIKRLGKRIAMLNFGTTLAAALTAAESLDATVVDMRFVKPLDVDLVKEMAQTHDVLVTVEENAIMGGAGSGVLELLQKLKMPKPVLQIGLPDEFIKHGSPEEVTHDLQLDAE
type: DOMAIN
name: Transketolase_C
description: Transketolase, C-terminal domain

phrase: REFLLKSVGMSSGHFASGL
type: CONSERVED_SITE
name: Transketolase_CS
description: Transketolase conserved site

phrase: TFSQVFGKWLCDIAEQDEKVLGITPAMREGSGMVEFSQRFPKQYFDAAIAEQHAVTLGAGFACEGFKPVVAIYSTFLQRGYDQLIHDVALQRLPVLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSAVRYPRG
type: DOMAIN
name: Transketolase-like_Pyr-bd
description: Transketolase-like, pyrimidine-binding domain

phrase: PTFSQVFGKWLCDIAEQDEKVLGITPAMREGSGMVEFSQRFPKQYFDAAIAEQHAVTLGAGFACEGFKPVVAIYSTFLQRGYDQLIHDVALQRLPVLFAIDRGGIVGADGPTHQGAFDLSFMRCIPNMVIMAPSDENECRQMLYTGYCYDAGPSAVRYPRGSATG
type: DOMAIN
name: Transketolase-like_Pyr-bd
description: Transketolase-like, pyrimidine-binding domain
Protein sequence:
MRIYKVGGAVRDRLLGRPVTDIDWVVVGASAEEMLAKGFRPVGADFPVFLHPKSGEEYALARTERKSGRGYSGFTFHASPEVTLEEDLIRRDLTINAMAEDEQGRLTDPYNGQKDLEERLLRHVSPAFAEDPLRVLRVARFAARYAGLGFRVAPETLELMRELSESGELQALTAERSWKEISRALMEDQPQVFIQVLRDCGALAVLMPEIDALFGVPQPAVHHPEIDTGAHTLSVLLQAALHQQPLSVRWACLLHDLGKGLTPEEEWPRHIGHERTGLELIKAVNERFKAPRECQELALLVGQYHTHGHKALELKASTLLELLQSFDVFRRPQRFEEFIAACEMDARGRLGLESRPYPQADYLRGAAEAARKVAVQPLLEQGFKGPQLGEALRLERLKAIKAYKEQHAP

Annotated regions:
phrase: TGAHTLSVLLQAALHQQPLSVRWACLLHDLGKGLTPEEEWPRHIGHERTGLELIKAVNERFKAPRECQELALLVGQYHTHGHKALELKASTLLELLQSFDV
type: DOMAIN
name: HD_domain
description: HD domain

phrase: MRIYKVGGAVRDRLLGRPVTDIDWVVVGASAEEMLAKGFRPVGADFPVFLHPKSGEEYALARTERKSGRGYSGFTFHASPEVTLEEDLIRRDLTINAMAEDEQGRLTDPYNGQKDLE
type: DOMAIN
name: PolA_pol_head_dom
description: Poly A polymerase, head domain

phrase: GFRVAPETLELMRELSESGELQALTAERSWKEISRALMEDQPQVFIQVLRDCGALAVLMPEID
type: DOMAIN
name: PolyA_RNA-bd
description: tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain

phrase: YKVGGAVRDRLLGRPVTDIDWVVVGASAEEMLAKGFRPVGADFPVFLHPKSGEEYALARTERKSGRGYSGFTFHASPEVTLEEDLIRRDLTINAMAEDEQGRLTDPYNGQKDLEERLL
type: DOMAIN
name: PolA_pol_head_dom
description: Poly A polymerase, head domain

phrase: DTGAHTLSVLLQAALHQQPLSVRWACLLHDLGKGLTPEEEWPRHIGHERTGLELIKAVNERFKAPRECQELALLVGQYH
type: DOMAIN
name: HD/PDEase_dom
description: HD/PDEase domain

phrase: GAHTLSVLLQAALHQQPLSVRWACLLHDLGKGLTPEEEWPRHIGHERTGLELIKAVNERFKAPRECQELALLVGQYHTHG
type: DOMAIN
name: HD_domain
description: HD domain
Protein sequence:
MSYSSFIALVERGELSSVTLQEQTVTGERRAEGGPKVTTYAPAGADLIARLQQHNVDIRAEPPPRPGVLAGLLWSLLPWVLIIGIWLWLSRKALGNLPGGGPLSIGRSKARLLSPEAHGRVTFEDVAGVDEAKEDLHEIVEFLRDPQKFQRLGGRIPRGCLLVGPPGTGKTLIARAVAGEANVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKNAPCIIFIDEIDAVGRHRGAGLGGGNDEREQTLNQLLVEMDGFEANEGIIIIAATNRPDVLDPALLRPGRFDRQIVVPNPDVIGRERILKVHVRKVPLAPDVDLKVIARGTPGFSGADLMNLVNEAALLAARRGKRIVTMHEFEDAKDKVMMGAERRTLVMTDDEKRLTAYHEAGHAIVALNVPATDPVHKATIIPRGRALGMVMQLPERDKLSMSFEQMTSRLAIMMGGRIAEEMIFGHDKVTSGAQSDIEQATRLARMMVTRWGFSPELGTVAYGENQEEVFLGMSMGRQQNISEATAQKIDSEVRRLVEAGLNDARRILEEKRADLEALARGLLEYETLSGDEIRNLLNGKPPVRDVDAVSPRAWRPRASVPSSRQQGSTRRPSGQLSPQPQG

Annotated regions:
phrase: IIIIAATNRPDVLDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: MSYSSFIALVERGELSSVTLQEQTVTGERRAEGGPKVTTYAPAGADLIARLQQHNVDIRAEP
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular

phrase: CLLVGPPGTGKTLIARAVAGEANVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKNAPCIIFIDEIDAVGRHRGAGLGGGNDEREQTLNQLLVEMDGFEANEGIIIIAATNRPDVLDPALLRPGRFDRQIVV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: DVDLKVIARGTPGFSGADLMNLVNEAALLAARRGKRIVTMHEFE
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: IPRGCLLVGPPGTGKTLIARAVAGEANVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKNAPCIIFIDEIDAVGRHRGAGLGGGNDEREQTLNQLLVEMDGFEANEGIIIIAATNRPDVLDPALLRPGRFDRQIVVPNP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VMTDDEKRLTAYHEAGHAIVALNVPATDPVHKATIIPRGRALGMVMQLPERDKLSMSFEQMTSRLAIMMGGRIAEEMIFGHDKVTSGAQSDIEQATRLARMMVTRWGFSPELGTVAYGENQEEVFLGMSMGRQQNISEATAQKIDSEVRRLVEAGLNDARRILEEKRADLEALARGLLEYETLSGDEIRN
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41
Protein sequence:
MEIRSLIVSMNPNLSSFELSRPVSPLTRSLVPFRSTKLVPRSISRVSASISTPNSETDKISVKPVYVPTSPNRELRTPHSGYHFDGTPRKFFEGWYFRVSIPEKRESFCFMYSVENPAFRQSLSPLEVALYGPRFTGVGAQILGANDKYLCQYEQDSHNFWGDRHELVLGNTFSAVPGAKAPNKEVPPEEFNRRVSEGFQATPFWHQGHICDDGRTDYAETVKSARWEYSTRPVYGWGDVGAKQKSTAGWPAAFPVFEPHWQICMAGGLSTGWIEWGGERFEFRDAPSYSEKNWGGGFPRKWFWVQCNVFEGATGEVALTAGGGLRQLPGLTETYENAALVCVHYDGKMYEFVPWNGVVRWEMSPWGYWYITAENENHVVELEARTNEAGTPLRAPTTEVGLATACRDSCYGELKLQIWERLYDGSKGKVILETKSSMAAVEIGGGPWFGTWKGDTSNTPELLKQALQVPLDLESALGLVPFFKPPGL

Annotated regions:
Protein sequence:
MTPSEFRQSVRRGAFRGPTAGHCGPFAQANLAILPDAYAHDFLRFCQANPKACPLLGVGEPGAFRIDALGDDLDIRTDVPSYNVYRDGRLTERVESLDALWRDDFVVFAIGCSFSFEDMLAREGIGLRHVEEGCNVPMYRTSIANRRAGIFGGQLVVSMRPLRGADAIRAVQITSRFPGVHGAPIHIGDPRALGIEDLNAPEFGDAVTIRDGELPVFWACGVTPQTALMDAKLPIAIAHTPGHMLMTDITNASLAVF

Annotated regions:
Protein sequence:
MASRNRKKLAELRRVLQAAGISGLELLSLDDVDPFPEAPETGATFEENALTKARAAFAATGIAAVADDSGLAVDALNGMPGVLSARWSGVTGASGEDRDRANTALLLAQLADVPDERRGAAFVSVCALVSPAGEVVVRGEWPGTIVREPRGEGGFGYDPVFQPLGSTRTAAELGPEEKDAVSHRGRALEQLLPALRDLAERDFA

Annotated regions:
Protein sequence:
MTKKVYVKTFGCQMNEYDSDKMVDVLNAAEGLEKTDTPEDADIILFNTCSVREKAQEKVFSDLGRVRELKEAKPDLLIGVGGCVASQEGASIVARAPYVDLVFGPQTLHRLPQMIDARRESGRAQVDITFPEIEKFDHLPPARVEGPSAFVSIMEGCSKYCSYCVVPYTRGDEVSRPLDDVLTEVAGLADQGVREVTLLGQNVNAYRGAIAAGSAEIADFATLIEYVADIPGIERIRYTTSHPKEFTQRLLDVYAKVPKLVDHLHLPVQHGSDRILMAMKRGYTVLEYKSVIRKLRAIRPNLSLSTDIIVGFPGETDADFDKTMALVHEMSYDTSFSFIYSPRPGTPAANLADDTPRELKLKRLQHLQATIEENVARISQSMLGKVERILVEGPSRKDPNELAGRTENNRVVNFPAPSAAHPRLIGQMIDVKINHAYPHSLRGELVLAHGDASAATH

Annotated regions:
phrase: QSMLGKVERILVEGPSRKDPNELAGRTENNRVVNFPAPSAAHPRLIGQMIDVKINHAYPHSLRGELV
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: PSAFVSIMEGCSKYCSYCVVPYTRGDEVSRPLDDVLTEVAGLADQGVREVTLLGQNVNAYRGAIAAGSAEIADFATLIEYVADIPGIERIRYTTSHPKEFTQRLLDVYAKVPKLVDHLHLPVQHGSDRILMAMKRGYTVLEYKSVIRKLRAIRPNLSLSTDIIVGFPGETDADFDKTMALVHEMSYDTSFSFIYSPRPGTPAANLADDTPRELKLKRLQ
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: TKKVYVKTFGCQMNEYDSDKMVDVLNAAEGLEKTDTPEDADIILFNTCSVREKAQEKVFSDLGRVRELKEAKPDLLIGVGGCVASQEGASIVARAPYVDLVFGPQTLHRLPQMIDARRESGRAQVDITFPEIEKFDHLPPARVEGPSAFVSIMEGCSKYCSYCVVPYTRGDEVSRPLDDVLTEVAGLADQGVREVTLLGQNVNAYRGAIAAGSAEIADFATLIEYVADIPGIERIRYTTSHPKEFTQRLLDVYAKVPKLVDHLHLPVQHGSDRILMAMKRGYTVLEYKSVIRKLRAIRPNLSLSTDIIVGFPGETDADFDKTMALVHEMSYDTSFSFIYSPRPGTPAANLADDTPRELKLKRLQHLQATIEENVARISQSMLGKVERILVEGPSRKDPNELAGRTENNRVVNFPAPSAAHPRLIGQMIDVKINHAYPHSLRGEL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: QSMLGKVERILVEGPSRKDPNELAGRTENNRVVNFPAPSAAHPRLIGQMIDVKINHAYPHSLRGEL
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: KKVYVKTFGCQMNEYDSDKMVDVLNAAEGLEKTDTPEDADIILFNTCSVREKAQEKVFSDLGRVRELKEAKPDLLIGVGGCVASQEGASIVARAPYVDLVFGPQTLHRLPQMIDARR
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: KVYVKTFGCQMNEYDSDKMVDVLNAAEGLEKTDTPEDADIILFNTCSVREKAQEKVFSDLGRVRELKEAKPDLLIGVGGCVASQEGASIVARAPYVDLVF
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: VSIMEGCSKYCSYCVVPYTRGDEVSRPLDDVLTEVAGLADQGVREVTLLGQNVNAYRGAIAAGSAEIADFATLIEYVADIPGIERIRYTTSHPKEFTQRLLDVYAKVPKLVDHLHLPVQHGSDRILMAMKRGYTVLEYKSVIRKLRAIRPNLSLSTDIIVGFPGETDADFDKTMA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VSIMEGCSKYCSYCVVPYTR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: RVEGPSAFVSIMEGCSKYCSYCVVPYTRGDEVSRPLDDVLTEVAGLADQGVREVTLLGQNVNAYRGAIAAGSAEIADFATLIEYVADIPGIERIRYTTSHPKEFTQRLLDVYAKVPKLVDHLHLPVQHGSDRILMAMKRGYTVLEYKSVIRKLRAIRPNLSLSTDIIVGFPGETDADFDKTMALVHEMSYDTSFSFIYSPRPGTPAANLADDTPRELKLKRLQHLQATIEENVA
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MTDTVDIPIIAKRLPVYAHPGDAGADLCAAEAVTLEPGERHTVPTGVSIALPEGYAAFVVPRSGLAMKHGLTIVNAPGTVDAGYRGEIRVTVLNTDRSMPYDIAVGDRIAQLIVMPVTRAVFVPVDTLPDSHRGTAGFGSSGYTVTQAGEHA

Annotated regions:
phrase: AGADLCAAEAVTLEPGERHTVPTGVSIALPEGYAAFVVPRSGLAMKHGLTIVNAPGTVDAGYRGEIRVTVLNTDRSMPYDIAVGDRIAQLI
type: DOMAIN
name: dUTPase_trimeric
description: dUTPase, trimeric

phrase: LPVYAHPGDAGADLCAAEAVTLEPGERHTVPTGVSIALPEGYAAFVVPRSGLAMKHGLTIVNAPGTVDAGYRGEIRVTVLNTDRSMPYDIAVGDRIAQLIVMPVTRAVFVPVDTLPDSHRGTAGFGSS
type: DOMAIN
name: dUTPase-like
description: dUTPase-like
Protein sequence:
MGELRFKHLFWGSFVESGGTFQTVLIFLLIPCSLTVDYRAAPILSNTTFLWIWNVPTERCVGNVNDPIDLSFFSLIGSPRKTATGQPVTLFYVDRLGLYPHIDANQAEHYGGIPQRGDYQAHLRKAKTDIEHYIPDDKLGLAIIDWEEWRPTWLRNWKPKDNYRNKSIELVQSTNPGLSITEATQKAIQQFEEAGRKFMEGTLHLGKFLRPNQLWGYYLFPDCYNNKFQDPKYDGQCPAVEKKRNDNLKWLWKASTGLYPSVYLKKDLKSNRQATLYVRYRVVEAIRVSKVGNASDPVPIFVYIRLVFTDRTSEYLLEDDLVNTIGEIVALGTSGIIIWDAMSLAQRAAGCPILHKYMQTTLNPYIVNVTLAAKMCSQTLCNEKGMCSRRKESSDVYLHLNPSHFDIMLTETGKYEVLGNPRVGDLEYFSEHFKCSCFSRMTCKETSDVKNVQDVNVCVGDNVCIKAKVEPNPAFYLLPGKSLLFMTTLGHVLYHLPQDIFVFPRKTLVSTP

Annotated regions:
Protein sequence:
MDLKAYFELIRLKNCLTAGFGALISGLIASNFTFGALFPLILAFLVVFFICGFGNSLNDIYDLKIDRINKPFRPIPSKRISLTDAKVFSYSIMIFGLIISLFNIYCFLMAVLNAVVLQKYAKIYKKNKIIGNMLVAYLTGSVFIFGGIAVGNVNVSLYLFSCAMFSMWAREIIKDYEDIEGDLKEKVSSLPIKYGEKSIYISLGLLLIAIGLSFLPYLTGIFGIYYLLMILICNLMFLAGFFNLLNAPSKKQARKTSKNIKLITNFVLIAFIIGSIFK

Annotated regions:
Protein sequence:
MAATTMSLSSSSFAGKAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAGGPLGEIVDPLYPGGSFDPLGLAERPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLEDLADHIADPVNNNAWLIATNFVPGK

Annotated regions: