nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MQISVNEFLTPRHIDVQEVSPTRAKITLEPLERGFGHTLGNALRRILLSSMPGCAVVEAEIDGVLHEYSAIEGVQEDVIEILLNLKGLAIKLHGRDEVTLTLAKKGPGVVTAADIQLDHDVEIVNGDHVIANLAANGSLNMKLTVARGRGYEPADARQSDEDESRSIGRLQLDASFSPVRRVAYVVENARVEQRTNLDKLVIDLETNGTLDPEEAIRRAATILQQQLAAFVDLKGDSEPVVVEQEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLDNWPPASLKKDDKATA

Annotated regions:
phrase: RAKITLEPLERGFGHTLGNALRRILLSSMPGCAVVEAEIDGVLHEYSAIEGVQEDVIEILLNLKGLAIKLHGRDEVTLTLAKKGPGVVTAADIQLDHDVEIVNGDHVIANLAANGSLNMKLTVARGRGYEPADARQSDEDESRSIGRLQLDASFSPVRRVAYVVENARVEQRTNLDKLVIDLETNGTLDPEEAIRRAATILQQQLAAFVD
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: QEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLTEIKDVL
type: DOMAIN
name: RNAP_asu_C
description: RNA polymerase, alpha subunit, C-terminal

phrase: EPLERGFGHTLGNALRRILLSSMPGCAVVEAEIDGVLHEYSAIEGVQEDVIEILLNLKGLAIKLHGRDEVTLTLAKKGPGVVTAADIQLDHDVEIVNGDHVIANLAANGSLNMKLTVARGRGYEPADARQSDEDESRSIGRLQLDASFSPVRRVAYVVENARVEQRTNLDKLVIDLETNGTLDPEEAIRRAATILQQQ
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: EIDGVLHEYSAIEGVQEDVIEILLNLKGLAIKLHGRDEVTLTLAKKGPGVVTAADIQLDHDVEIVNGDHVIANLAANGSLNMKLTVARGRGYEPADARQSDEDESRSIGRLQLDASF
type: DOMAIN
name: DNA-dir_RNA_pol_insert
description: DNA-directed RNA polymerase, insert domain
Protein sequence:
MKIILTGFMGAGKSTVGPVVAEKLGLDFIETDQLVLKRSGCSSIREIFETKGEGVFRAIESEVCKELGDFKNVCIATGGGVVEREENILHLKSGGALNILLAVEFGEVTERLKNSDDRPLFSDPDRAEELFQKRLKQYQSCADFEVDTSGRSIADVIDLIISPFKQGIRKFAVIGSPVEHSLSPRMHVAGYKALSVEDYFVFEKKQVEPDRLTGFVEGLKQGQYQGVSVTIPHKEKVVPYLNELDPEAEAIGTVNTVTVSGGRLTGYNTDVEGILSPLRGKTVIENSMALVLGAGGAARTAVFALKKYGADVTVSNRTREKAESLARQFDCKSVEMDDLDFSVFDIILNMTSVGLDLTCDHSLVPAGAIRPGQVIFDAVYRPGSTRLIREAQQAGAKTIDGLEMLLAQGVRQFEIYTGFKAPVAAMKKALEV

Annotated regions:
phrase: IENSMALVLGAGGAARTAVFALKKYGADVTVSNRTREKAESLARQFDCKSVEMDDLDFSVFDIILNMT
type: DOMAIN
name: Shikm_DH/Glu-tRNA_Rdtase
description: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase

phrase: GLEMLLAQGVRQFEIYTGFKAPVAAMKKAL
type: DOMAIN
name: SDH_C
description: SDH, C-terminal

phrase: VIGSPVEHSLSPRMHVAGYKALSVEDYFVFEKKQVEPDRLTGFVEGLKQGQYQGVSVTIPHKEKVVPYLNELDPEAEAIGTVNT
type: DOMAIN
name: Shikimate_DH-bd_N
description: Shikimate dehydrogenase substrate binding, N-terminal
Protein sequence:
METTMFKGSITALITPMNDDGSLDFSGFGRFVDWQVTEGSSGVVPVGTTGESPTLTHEEHARIVEYTVQVVAGRIPVIAGAGSNSTAEAVGMARHAKSVGADGVLVVAPYYNKPTQEGLYRHFMTVADATDLPLIIYNIPGRSVVDISVETMARMAQHARIVGVKDATANLLRPLQVRRAIRHKPFTQLSGEDGTVVSFLAAGGEGCISVTSNIAPRLCAELHRAWQDGRVADAMAIQDRLSAVHDALFCESNPGPVKYAASLLGLAGETCRLPLAPLAEDSRMRVREALTGAGLLN

Annotated regions:
phrase: GVVPVGTTGESPTLTHE
type: CONSERVED_SITE
name: Schiff_base-form_aldolases_CS
description: Schiff base-forming aldolase, conserved site

phrase: YNIPGRSVVDISVETMARMAQHARIVGVKD
type: ACTIVE_SITE
name: Schiff_base-form_aldolases_AS
description: Schiff base-forming aldolase, active site
Protein sequence:
MRLSKLFMPTLKEAPSDAIIASNKLMLRAALARKISNGLYSYLPLGVRVLNKISNIIREEMDAIGSNECIMPILVSKELLTPSGRWERFKKELFRLKDRNDVDMAMGPTHEEAFTITAQNEIQSYKDFPLTLYQIHTKFRDEIRPRFGVIRSKEFTMKDAYSFHITKECLDKTYNDMSGAYTKIFKRMGLDTVSVKADSGAMGGEGSEEFMVLSEVGEETIIFCSKCDYRANVEKANVKEEEAAKSYTDKALEEVHTPDIKTINDLEKFFNTSSKNFIKSIIYKTEEDEIILVAIRGDLEINETKLSNALGGLDIELADEETVKEVTGARVGFASPIGLKKKIRIFADNSIKSVADAIVGGNKDDTHIKNVNIERDFNIDVWGDFRTAKEGDRCPQCGETLYQKKGLELGHIFKLGDKYTEAFNFKVLDENNKEITPIMGCYGIGVNRALASVIEQNYDDKGIIFPISVAPYEAIVVAIDKETEDSFKKAEEIYNTLNSIGVETMFDDRKERLGVKLNDCDLIGIPIRIIVGKKSLQKGVVEFKLRKSQESVEVKVEDIIEYVKTKKQELFNEINSRL

Annotated regions:
phrase: DAIIASNKLMLRAALARKISNGLYSYLPLGVRVLNKISNIIREEMDAIGSNECIMPILVSKELLTPSGRWERFKKELFRLKDRNDVDMAMGPTHEEAFTITAQNEIQSYKDFPLTLYQIHTKFRDEIRPRFGVIRSKEFTMKDAYSFHITKECLDKTYNDMSGAYTKIFKRMGLDTVSVKADSGAMGGEGSEEFMVLSEVGEETIIFCSKCDYRANVEKANVKEEEAAKSYTDKALEEVHTPDIKTINDLEKFFNTSSKNFIKSIIYKTEEDEIILVAIRGDLEINETKLSNALGGLDIELADEETVKEVTGARVGFASPIGLKKKIRIFADNSIKSVADAIVGGNKDDTHIKNVNIERDFNIDVWGDFRTAKEGDRCPQCGETLYQKKGLELGHIFKLGDKYTEAFNFKVLDENNKEITPIMGCYGIGVNRALASVIEQNYDDKGIIF
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: AIVVAIDKETEDSFKKAEEIYNTLNSIGVETMFDDRKERLGVKLNDCDLIGIPIRIIVGKKSLQKGVVEFKLRKSQESVEVKVEDIIEYVK
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: TPDIKTINDLEKFFNTSSKNFIKSIIYKTEEDEIILVAIRGDLEINETKLSNALGGLDIELADEETVKEVTGARVGFASPIGLKKKIRIFADNSIKSVADAIVGGNKDDTHIKNV
type: DOMAIN
name: YbaK/aa-tRNA-synth-assoc-dom
description: YbaK/aminoacyl-tRNA synthetase-associated domain

phrase: PYEAIVVAIDKETEDSFKKAEEIYNTLNSIGVETMFDDRKERLGVKLNDCDLIGIPIRIIVGKKSLQKGVVEFKLRKSQESVEVKVEDIIEYV
type: DOMAIN
name: ProRS_anticodon_short
description: Proline--tRNA ligase, anticodon binding domain

phrase: DAIIASNKLMLRAALARKISNGLYSYLPLGVRVLNKISNIIREEMDAIGSNECIMPILVSKELLTPSGRWERFKKELFRLKDRNDVDMAMGPTHEEAFTITAQNEIQSYKDFPLTLYQIHTKFRDEIRPRFGVIRSKEFTMKDAYSFHITKECLDKTYNDMSGAYTKIFKRMGLDTVSVKADSGAMGGEGSEEFMVLSEVGEETIIFCSKCDYRANVEKANVKEEEAAKSYTDKALEEVHTPDIKTINDLEKFFNTSSKNFIKSIIYKTEEDEIILVAIRGDLEINETKLSNALGGLDIELADEETVKEVTGARVGFASPIGLKKKIRIFADNSIKSVADAIVGGNKDDTHIKNVNIERDFNIDVWGDFRTAKEGDRCPQCGETLYQKKGLELGHIFKLGDKYTEAFNFKVLDENNKEITPIMGCYGIGVNRALASVIE
type: DOMAIN
name: ProRS_core_prok
description: Prokaryote proline-tRNA ligase core domain

phrase: FRLKDRNDVDMAMGPTHEEAFTITAQNEIQSYKDFPLTLYQIHTKFRDEIRPRFGVIRSKEFTMKDAYSFHITKECLDKTYNDMSGAYTKIFKRMGLDTVSVKADSGAMGGEGSEEFMVLSEVGEETIIFCSKCDYRANVEKANVKEEEAAKSYTDKALEEVHTPDIKTINDLEKFFNTSSKNFIKSIIYKTEEDEIILVAIRGDLEINETKLSNALGGLDIELADEETVKEVTGARVGFASPIGLKKKIRIFADNSIKSVADAIVGGNKDDTHIKNVNIERDFNIDVWGDFRTAKEGDRCPQCGETLYQKKGLELGHIFKLGDKYTEAFNFKVLDENNKEITPIMGCYGIGVNRALASVIEQ
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
Protein sequence:
MSGLRPALSTFLFLLLITGGVYPLLTTALGQWWYPWQANGSLIREGDTVRGSALIGQNFTGNGYFHGRPSATAEMPYNPQASGGSNLAVSNPELDKQIAARVAALRAANPDASTNVPVELVTASASGLDNNITPQAAAWQIPRIAKARNLSVEQLTQLIAKYSQQPLVKYIGQPVVNIVELNLALDKLDE

Annotated regions:
Protein sequence:
MATEAAPPRIAVRLPSTSVRDAGANYRIARYVAVVAGLLGAVLAIATPLLPVNQTTAQLNWPQNGTFASVEAPLIGYVATDLNITVPCQAAAGLAGSQNTGKTVLLSTVPKQAPKAVDRGLLLQRANDDLVLVVRNVPLVTAPLSQVLGPTCQRLTFTAHADRVAAEFVGLVQGPNAEHPGAPLRGERSGYDFRPQIVGVFTDLAGPAPPGLSFSASVDTRYSSSPTPLKMAAMILGVALTGAALVALHILDTADGMRHRRFLPARWWSIGGLDTLVIAVLVWWHFVGANTSDDGYILTMARVSEHAGYMANYYRWFGTPEAPFGWYYDLLALWAHVSTASIWMRLPTLAMALTCWWVISREVIPRLGHAVKTSRAAAWTAAGMFLAVWLPLDNGLRPEPIIALGILLTWCSVERAVATSRLLPVAIACIIGALTLFSGPTGIASIGALLVAIGPLRTILHRRSRRFGVLPLVAPILAAATVTAIPIFRDQTFAGEIQANLLKRAVGPSLKWFDEHIRYERLFMASPDGSIARRFAVLALVLALAVSVAMSLRKGRIPGTAAGPSRRIIGITIISFLAMMFTPTKWTHHFGVFAGLAGSLGALAAVAVTGAAMRSRRNRTVFAAVVVFVLALSFASVNGWWYVSNFGVPWSNSFPKWRWSLTTALLELTVLVLLLAAWFHFVANGDGRRTARPTRFRARLAGIVQSPLAIATWLLVLFEVVSLTQAMISQYPAWSVGRSNLQALAGKTCGLAEDVLVELDPNAGMLAPVTAPLADALGAGLSEAFTPNGIPADVTADPVMERPGDRSFLNDDGLITGSEPGTEGGTTAAPGINGSRARLPYNLDPARTPVLGSWRAGVQVPAMLRSGWYRLPTNEQRDRAPLLVVTAAGRFDSREVRLQWATDEQAAAGHHGGSMEFADVGAAPAWRNLRAPLSAIPSTATQVRLVADDQDLAPQHWIALTPPRIPRVRTLQNVVGAADPVFLDWLVGLAFPCQRPFGHQYGVDETPKWRILPDRFGAEANSPVMDHNGGGPLGITELLMRATTVASYLKDDWFRDWGALQRLTPYYPDAQPADLNLGTVTRSGLWSPAPLRRG

Annotated regions:
phrase: SPTPLKMAAMILGVALTGAALVALHILDTADGMRHRRFLPARWWSIGGLDTLVIAVLVWWHFVGANTSDDGYILTMARVSEHAGYMANYYRWFGTPEAPFGWYYDLLALWAHVSTASIWMRLPTLAMALTCWWVISREVIPRLGHAVKTSRAAAWTAAGMFLAVWLPLDNGLRPEPIIALGILLTWCSVERAVATSRLLPVAIACIIGALTLFSGPTGIASIGALLVAIGPLRTILHRRSRRFGVLPLVAPILAAATVTAIPIFRDQTFAGEIQANLLKRAVGPSLKWFDEHIRYERLFMASPDGSIARRFAVLALVLALAVSVAMSLRKGRIPGTAAGPSRRIIGITIISFLAMMFTPTKWTHHFGVFAGLAGSLGALAAVAVTGAAMRSRRNRTVFAAVVVFVLALSFASVNGWWYVSNFGVPWSNSFPKWRWSLTTALLELTVLVLLLAAWFH
type: DOMAIN
name: Arabino_trans_central
description: Arabinofuranosyltransferase, central domain

phrase: NQTTAQLNWPQNGTFASVEAPLIGYVATDLNITVPCQAAAGLAGSQNTGKTVLLSTVPKQAPKAVDRGLLLQRANDDLVLVVRNVPLVTAPLSQVLGPTCQRLTFTAHADRVAAEFVGLVQGPNAEHPGAPLRGERSGYDFRPQIVGVFTDLAGPAPPGLSFSASVDT
type: DOMAIN
name: Arabino_trans_N
description: Arabinosyltransferas, concanavalin like domain

phrase: VVSLTQAMISQYPAWSVGRSNLQALAGKTCGLAEDVLVELDPNAGMLAPVTAPLADALGAGLSEAFTPNGIPADVTADPVMERPGDRSFLNDDGLITGSEPGTEGGTTAAPGINGSRARLPYNLDPARTPVLGSWRAGVQVPAMLRSGWYRLPTNEQRDRAPLLVVTAAGRFDSREVRLQWATDEQAAAGHHGGSMEFADVGAAPAWRNLRAPLSAIPSTATQVRLVADDQDLAPQHWIALTPPRIPRVRTLQNVVGAADPVFLDWLVGLAFPCQRPFGHQYGVDETPKWRILPDRFGAEANSPVMDHNGGGPLGITELLMRATTVASYLKDDWFRDWGALQRLTPYYPDAQPADLNLGTVTRSGLWSPAPL
type: DOMAIN
name: Arabino_trans_C
description: Arabinosyltransferase, C-terminal
Protein sequence:
MEIIRSNFKCNLHKVYQAIEEADFFAIDGEFSGISDGPSVSALTNGFDTPEERYQKLKKHSMDFLLFQFGLCTFKYDYTDSKYITKSFNFYVFPKPFNRSPPDVKFVCQSSSIDFLASQGFDFNKVFRNGIPYLNQEEERQLREQYDEKRSQANGAGALSYVSPNTSKCPVTIPEDQKKFIDQVVEKIEDLLQSEENKNLDLEPCTGFQRKLIYQTLSWKYPKGIHVETLETEKKERYIVISKVDEEERKRREQQKHAKEQEELNDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTVHQFYCPLPADLSEFKEMTTCVFPRLLDTKLMASTQPFKDIINNTSLAELEKRLKETPFSPPKVESAEGFPSYDTASEQLHEAGYDAYITGLCFISMANYLGSFLSPPKIHVSARSKLIEPFFNKLFLMRVMDIPYLNLEGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVKIAVNTSKYAESYRIQTYAEYVGRKQEEKQIKRKWTEDSWKEADSKRLNPQCIPYALQNHYYRNNSFTAPSTVGKRNLSPSQEEAGLEDGVSGEISDTELEQTDSCAEPLSEGRKKAKKLKRMKKELSPAVSISKNSPATLFEVPDTW

Annotated regions:
phrase: GPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVKIAVNTSKYAESYRIQTYAEYV
type: DOMAIN
name: PolyA-riboNase_RNA-binding
description: Poly(A)-specific ribonuclease, RNA-binding

phrase: IDQVVEKIEDLLQSEENKNLDLEPCTGFQRKLIYQTLSWKYPKGIHVETLETEKKERYIVISKVD
type: DOMAIN
name: PARN_R3H
description: PARN, R3H domain

phrase: KKFIDQVVEKIEDLLQSEENKNLDLEPCTGFQRKLIYQTLSWKYPKGIHVETLETEKKERYIVISKV
type: DOMAIN
name: R3H_dom
description: R3H domain
Protein sequence:
MKNEKINILNLTQEELTELLVSLGLKKFYGKEVFIWLHKKITRSFDEMTNLSLKDREILKEKTYIPFFNLLKYQVSKIDKTEKFLFELEDGGTIETVLLRHKDSKNKEIRNTLCVSSQVGCPVKCSFCATGQSGYMRNLSVSEILNQIYTVERRLRKKGENLNNLVFMGMGEPLLNIDNLSKALSIISNENGINISKRKITISTSGVVSGIEKILLDKIPIELAISLHSAINEKRDKIIPINKNFPLEDLSAVLIEYQKQTKRRITFEYILIDNFNISETDANALADFIHQFDHVVNLIPYNEVEGAEHTRPSVKKINKFYIYLKNVRKVNVTLRQEKGSDIDGACGQLRQRNKKGDN

Annotated regions:
phrase: SSQVGCPVKCSFCATGQSGYMRNLSVSEILNQIYTVERRLRKKGENLNNLVFMGMGEPLLNIDNLSKALSIISNENGINISKRKITISTSGVVSGIEKILLDKIPIELAISLHSAINEKRDKIIPINKNFPLEDLSAVLIEYQKQTKRRITFEYIL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: INILNLTQEELTELLVSLGLKKFYGKEVFIWLHKKITRSFDEMTNLSLKDREILKEKTY
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: KEIRNTLCVSSQVGCPVKCSFCATGQSGYMRNLSVSEILNQIYTVERRLRKKGENLNNLVFMGMGEPLLNIDNLSKALSIISNENGINISKRKITISTSGVVSGIEKILLDKIPIELAISLHSAINEKRDKIIPINKNFPLEDLSAVLIEYQKQTKRRITFEYILIDNFNISETDANALADFIHQFDHVVNLIPYNEVEGAEHTRPSVKKINKFYIYLKNVRKVNVTL
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MSTTTTTTTTEKPIQVTLYDSNTIKQTLDDSIVKYVTSALSYTQNQKLNYTKVLFGLIGCTLAAIAQFYPIPFPKNKPVLILCVALYVVISLILYYINIFIQKDYILQASKSNDEIKVATVLQKYDPNYQVKIENAKNSSINVPFSKSIDLYFDTKGTFLESNFHNDLSVQFKKFAKLNVKDK

Annotated regions:
Protein sequence:
MIKMLEGYYIIENPGVVPAERRFRMKDLKAWGYDLHLGTIEGERAYFISKTGERHEGETYIFKGKEYHVSRTQKEIPENARLLARIIIERGNPYLEVWLEEEDVKFPLTKEDPRIILKRIWEKEKLNQLLKHVRAVGLTTDFYKDNVFTQGIPLPYEEYPPKVRRVLREVKDIHRDLTGFGRFVFQYFGEVDKMHNYRLYWTLPTLHLFDIDIANEVDKVLGMLD

Annotated regions:
Protein sequence:
MHTSVFKEPKNNDAVLSNHCNASVAFLHLGCEKNLVDTEHMMGLLASEGYGVSSNTDDAEVVVVNTCSFIEQAREESVRALVGLADQGKEIIIAGCLAQHFKSELLESIPEAKAIVGTGDYQNIIEVLQRVRQGERVNQVSENPKFVGDENLPRYRTTGRFVSYLKVAEGCNYRCAFCIIPTLRGNQRSRSVQSIVNEANQLAKEGIQELILISQITTNYGMDLYGRPYLADLLRALSHVDIPWIRIHYAYPTGLTPEVVLAYKEVPNVLPYFDLPLQHSHPDVLRAMNRPWQSDVSSALLNRIKEQLPEAVMRTTLIVGFPGETKAQFDHLCAFVENQKFDHVGVFAFSREEGTEAAKLPNQVPFEIAQARKDKLVAIQQPISAAKNQALIGQTVDVLIEREDLATGELIGRSARFAPEVDGEVRLRPSQVLFNDLHGKIVPALITGSELYDLTGEINHLN

Annotated regions:
phrase: TTGRFVSYLKVAEGCNYRCAFCIIPTLRGNQRSRSVQSIVNEANQLAKEGIQELILISQITTNYGMDLYGRPYLADLLRALSHVDIPWIRIHYAYPTGLTPEVVLAYKEVPNVLPYFDLPLQHSHPDVLRAMNRPWQSDVSSALLNRIKEQLPEAVMRTTLIVGFPGETKAQFDHLCAFVENQKFDHVGVFAFSREEGTEAAKLPNQVPFEIAQARKDKLVAIQQPISA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LKVAEGCNYRCAFCIIPTLR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: IGQTVDVLIEREDLATGELIGRSARFAPEVDGEVRLRPSQVLFNDLHGKIVPALITGSELYDLTGE
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: ASVAFLHLGCEKNLVDTEHMMGLLASEGYGVSSNTDDAEVVVVNTCSFIEQAREESVRALVGLADQGKEIIIAGCLAQHFKSELLESIPEAKAIVGTGDYQNIIEVLQRVR
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: FVSYLKVAEGCNYRCAFCIIPTLRGNQRSRSVQSIVNEANQLAKEGIQELILISQITTNYGMDLYGRPYLADLLRALSHVDIPWIRIHYAYPTGLTPEVVLAYKEVPNVLPYFDLPLQHSHPDVLRAMNRPWQSDVSSALLNRIKEQLPEAVMRTTLIVGFPGETKAQFDHLCAFVENQKFDHVGVFAFSREEGTEAAKLPNQVPFEIAQARKDKLV
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: CNASVAFLHLGCEKNLVDTEHMMGLLASEGYGVSSNTDDAEVVVVNTCSFIEQAREESVRALVGLADQGKEIIIAGCLAQHFKSELLESIPEAKAIVGTGDYQNIIEVLQRVRQGERVNQVSENPKFVGDENLPRYRTTGRFVSYLKVAEGCNYRCAFCIIPTLRGNQRSRSVQSIVNEANQLAKEGIQELILISQITTNYGMDLYGRPYLADLLRALSHVDIPWIRIHYAYPTGLTPEVVLAYKEVPNVLPYFDLPLQHSHPDVLRAMNRPWQSDVSSALLNRIKEQLPEAVMRTTLIVGFPGETKAQFDHLCAFVENQKFDHVGVFAFSREEGTEAAKLPNQVPFEIAQARKDKLVAIQQPISAAKNQALIGQTVDVLIEREDLATGELIGRSARFAPEVDGEVRLRPSQVLFNDLHGKIVPALITGSELYDLTGEI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VAFLHLGCEKNLVDTEHMMGLLASEGYGVSSNTDDAEVVVVNTCSFIEQAREESVRALVGLADQGKEIIIAGCLAQHFKSELLESIPEAKAIV
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: QALIGQTVDVLIEREDLATGELIGRSARFAPEVDGEVRLRPSQVLFNDLHGKIVPALITGSELYDLTGEIN
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: VAEGCNYRCAFCIIPTLRGNQRSRSVQSIVNEANQLAKEGIQELILISQITTNYGMDLYGRPYLADLLRALSHVDIPWIRIHYAYPTGLTPEVVLAYKEVPNVLPYFDLPLQHSHPDVLRAMNRPWQSDVSSALLNRIKEQLPEAVMRTTLIVGFPGETKAQFDHLCA
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MEEDKQYKVLLIGDSDVGKTSIVKRFSDDTFDEDLLCTIGVEFKMKEVKVDGKKVDLCIWDTAGQEKFRALISSYYRGAHGIILTYDVTKRESFDNLNYWLNEVENFANRSNLVKLLVGNKIDKENREVTREEGAEFAKKKAMLFIECSAKSKIGIQQAFEELAQKIIEIPQNTSSSQPKQRNTGSVKVEDEPDHNQGVCSC

Annotated regions:
phrase: KQYKVLLIGDSDVGKTSIVKRFSDDTFDEDLLCTIGVEFKMKEVKVDGKKVDLCIWDTAGQEKFRALISSYYRGAHGIILTYDVTKRESFDNLNYWLNEVENFANRSNLVKLLVGNKIDKENREVTREEGAEFAKKKAMLFIECSAKSKIGIQQAFE
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain
Protein sequence:
MGQKIHPTGFRLSISRNWASRWYANDRDFAGMLAEDIKVREYLKAKLKNASVSRVLIERPAKNARITIFSARPGVVIGKKGEDIENLKRELSRQLGVPVAVNIEEVRKPEIDAKLIADSITQQLEKRIMFRRAMKRAMQNAMRLGALGIKIMSSGRLNGIEIARCEWYREGRVPLHTLRADIDYGTSEAQTTYGIIGVKVWVYKGDTLGRNDLPAAVEARTDEERRPRGPRRDDRGARPGADRPAPRVARRPPMGANTAPSDGSDKPAEATGAGAPKPAVQRVRKVAAPAAAADGKGE

Annotated regions:
phrase: ITQQLEKRIMFRRAMKRAMQNAMRLGALGIKIMSSGRLNGIEIARCEWYREGRVPLHTLRADIDYGTSEAQTTYGIIGVKVW
type: DOMAIN
name: Ribosomal_uS3_C
description: Small ribosomal subunit protein uS3, C-terminal

phrase: ARCEWYREGRVPLHTLRADIDYGTSEAQTTYGII
type: CONSERVED_SITE
name: Ribosomal_uS3_CS
description: Small ribosomal subunit protein uS3, conserved site

phrase: PAKNARITIFSARPGVVIGKKGEDIENLKRELSRQLGVPVAVNIEEVRKPEIDAKLIADSITQQL
type: DOMAIN
name: KH_dom
description: K Homology domain

phrase: VREYLKAKLKNASVSRVLIERPAKNARITIFSARPGVVIGKKGEDIENLKRELSRQLGVPVAVNIEEV
type: DOMAIN
name: KH_dom_type_2
description: K Homology domain, type 2

phrase: KVREYLKAKLKNASVSRVLIERPAKNARITIFSARPGVVIGKKGEDIENLKRELSRQLGVPVAVNIEEVRKP
type: DOMAIN
name: KH_dom_type_2
description: K Homology domain, type 2
Protein sequence:
MASVNWADDRAARKKFPPPSFYMPLLVSSDKAPYRVIPRNLVPIGKGNKDEQIGYWNVQERWRMRRGQRVDLPPKVHFYYLGTGPHKDLKFRQRSDGVVWVAKEGAKTVNTSLGNRKRNQKPLEPKFSIALPPELSVVEFEDRSNNSSRASSRSSTRNNSRDSSRSTSRQQSRTRSDSNQSSSDLVAAVTLALKNLGFDNQSKSPSSSGTSTPKKPNKPLSQPRADKPSQLKKPRWKRVPTREENVIQCFGPRDFNHNMGDSDLVQNGVDAKGFPQLAELIPNQAALFFDSEVSTDEVGDNVQITYTYKMLVAKDNKNLPKFIEQISAFTKPSSIKEMQSQSSHVAQNTVLNASIPESKPLADDDSAIIEIVNEVLH

Annotated regions:
phrase: PPPSFYMPLLVSSDKAPYRVIPRNLVPIGKGNKDEQIGYWNVQERWRMRRGQRVDLPPKVHFYYLGTGPHKDLKFRQRSDGVVWVAKEGAKTVNTSLGNRKRNQKPLEPKFSIALPPELS
type: DOMAIN
name: N_prot_N_CoV
description: Nucleocapsid (N) protein, N-terminal domain, coronavirus

phrase: NVIQCFGPRDFNHNMGDSDLVQNGVDAKGFPQLAELIPNQAALFFDSEVSTDEVGDNVQITYTYKMLVAKDNKNLPKFIEQIS
type: DOMAIN
name: N_prot_C_CoV
description: Nucleocapsid (N) protein, C-terminal domain, coronavirus

phrase: PPPSFYMPLLVSSDKAPYRVIPRNLVPIGKGNKDEQIGYWNVQERWRMRRGQRVDLPPKVHFYYLGTGPHKDLKFRQRSDGVVWVAKEGAKTVNTSLGNRKRNQKPLEPKFSIALPPELSVV
type: DOMAIN
name: N_prot_N_CoV
description: Nucleocapsid (N) protein, N-terminal domain, coronavirus

phrase: PRADKPSQLKKPRWKRVPTREENVIQCFGPRDFNHNMGDSDLVQNGVDAKGFPQLAELIPNQAALFFDSEVSTDEVGDNVQITYTYKMLVAKDNKNLPKFIEQISAFTKPSSIK
type: DOMAIN
name: N_prot_C_CoV
description: Nucleocapsid (N) protein, C-terminal domain, coronavirus
Protein sequence:
MPVCTIEEAVEDIRAGKMVILVDDEDRENEGDLCMAGEAVTPEAINFMATHGRGLICLAMSPAIIEQLGLPMMVPNNQSPFQTGFTISIEARTGVSTGISAADRARTIEAAVAADASPRDIISPGHIFPLKAREGGVLVRTGQTEGSVELARMAGMRHAGIICEIMNEDGSMARMPDLEKFAARHDLKICTIADLVAYRLRKDLLVHRAAEARLPTLHAGEFKVIAYSNRVDNMEHVALIKGDIESDQPVMVRVHSECMTGDIFGSARCDCGSQLHAAMRMIDQEGAGLILYMRQEGRGIGLVNKLKAYCLQDDQGLDTVEANVRLGFKPDLRDYGIGAQILRDLGVSKMRLLTNNPKKIVGLEGYGLEVVERLPIEIPAESENRKYLKTKKDKMGHMLELYGENPENCGSREL

Annotated regions:
phrase: RAAEARLPTLHAGEFKVIAYSNRVDNMEHVALIKGDIESDQPVMVRVHSECMTGDIFGSARCDCGSQLHAAMRMIDQEGAGLILYMRQEGRGIGLVNKLKAYCLQDDQGLDTVEANVRLGFKPDLRDYGIGAQILRDLGVSKMRLLTNNPKKIVGLEGYGLEVVERL
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MAFSGTWQVYAQENYEEFLRAISLPEDVIKLAKDVKPVTEIQQTGNDFVITSKTPGKSVTNSFTIGKEAEITTMDGRKLKCIVKLEGGKLISETEKFSHKQEIKGGEMIETLTVAGTTMVRKSKKV

Annotated regions:
phrase: FSGTWQVYAQENYEEFLRAISL
type: DOMAIN
name: Fatty_acid-bd
description: Cytosolic fatty-acid binding

phrase: SFTIGKEAEITTMDGR
type: DOMAIN
name: Fatty_acid-bd
description: Cytosolic fatty-acid binding

phrase: GGEMIETLTVAGTTMVRKSK
type: DOMAIN
name: Fatty_acid-bd
description: Cytosolic fatty-acid binding

phrase: GTWQVYAQENYEEFLRA
type: DOMAIN
name: Fatty_acid-bd
description: Cytosolic fatty-acid binding
Protein sequence:
MFISEIQLKNYRNYEKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEDFGQIKGKLQKRNSSLSLELNISKKGKKAKLNQLEQQKLSQYIGVMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPVYLYELSQYQKVLTQRNHLLKKMQGNSKNEETMLDVFTLQLIEHGTKILQKRFEFLHLLQEWAAPIHRGISRGLEELEIVYKPSVDVSESMDLSKIKEVYYESFQSVKQREIFRGTTLIGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLSELDDYRQSHLLNTIQGKVQTFVTTTSVDGIEHETLKEAKTIHVTNGTVDCEIDRA

Annotated regions:
phrase: ILLLDDVLSELDDYRQSH
type: CONSERVED_SITE
name: DNA-binding_RecF_CS
description: DNA-binding, RecF, conserved site

phrase: FAPEDLNLVKGSPQVRRRFL
type: CONSERVED_SITE
name: DNA-binding_RecF_CS
description: DNA-binding, RecF, conserved site

phrase: FISEIQLKNYRNYEKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEDFGQIKGKLQKRNSSLSLELNISKKGKKAKLNQLEQQKLSQYIGVMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPVYLYELSQYQKVLTQRNHLLKKMQGNSKNEETMLDVFTLQLIEHGTKILQKRFEFLHLLQEWAAPIHRGISRGLEELEIVYKPSVDVSESMDLSKIKEVYYESFQSVKQREIFRGTTLIGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLSELDDYRQSHLLNTIQGKVQTFVTTTSVDG
type: DOMAIN
name: RecF/RecN/SMC_N
description: RecF/RecN/SMC, N-terminal
Protein sequence:
MSTTADKIAVLGAGSWGTALASLLARHGHPTVLWGRDAAVVEAIDQRHENPRYLPGIPLPDSLRATTDLASAVEGAAWILVVTPSHAFGETVRALAPLRPAGAGVAWATKGFEPGSGRFLHEVAREVLGEDVPLAVVTGPSFAKEVTQGLPTAITVHGDVPEFAQMVAEAMHGPAFRAYTGDDMVGAELGGAMKNVLAVATGVADGMQLGLNARAGLITRGLNEMLRLAAAIGAKPETLMGLAGLGDLVLTCTGDLSRNRRLGLALGRGQTLQDAVREIGQVVESVQTADEVMRQARRHGIDLPISDRVRAVLHGEQTPEEGLRALLAREQKPEYPDTLFK

Annotated regions:
phrase: KIAVLGAGSWGTALASLLARHGHPTVLWGRDAAVVEAIDQRHENPRYLPGIPLPDSLRATTDLASAVEGAAWILVVTPSHAFGETVRALAPLRPAGAGVAWATKGFEPGSGRFLHEVAREVLGEDVPLAVVTGPSFAKEVTQGLPTAITVHG
type: DOMAIN
name: G3P_DH_NAD-dep_N
description: Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal

phrase: DMVGAELGGAMKNVLAVATGVADGMQLGLNARAGLITRGLNEMLRLAAAIGAKPETLMGLAGLGDLVLTCTGDLSRNRRLGLALGRGQTLQDAVREIGQVVESVQTADEVMRQARRHGIDLPISDRVRAVLHGEQTPEE
type: DOMAIN
name: G3P_DH_NAD-dep_C
description: Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal
Protein sequence:
MKMANIAIVGATGMVGRTFLKVLEDRNFPIENLYLFSSKKSAGSSLEFKGKNYIVEELNENSFDRDIDIALFSAGGNVSLKYAPIAKEKGVIVVDNSSAFRMHKDIPLVVPEVNPEDIKNHNGIIANPNCSTIQAVVALKPLHDKFKIKRIVYSTYQAVSGSGVNGINDLEEGLKGNKNIFYPHQIANNCLPHIDTFLENGYTKEEMKMINETMKILNDYSLKITSTTVRVPVFNCHSESVNVEFEKTFEIEDIFKTLRNAHGVVVLDDPSSNEYPLALNVTGKDEVFVGRIRRDFSLDNGINMWIVADNIRKGAATNAVQIAEYILKYNLI

Annotated regions:
phrase: NIAIVGATGMVGRTFLKVLEDRNFPIENLYLFSSKKSAGSSLEFKGKNYIVEELNENSFDRDIDIALFSAGGNVSLKYAPIAKEKGVIVVDNSSAFRMHKDIPLVVPEVNPEDIKN
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: NIAIVGATGMVGRTFLKVLEDRNFPIENLYLFSSKKSAGSSLEFKGKNYIVEELNENSFDRDIDIALFSAGGNVSLKYAPIAKEKGVIVVDNSSAFRMHKDIPLVVPEVNPEDIKN
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: LKPLHDKFKIKRIVYSTYQAVSGSGVNGINDLEEGLKGNKNIFYPHQIANNCLPHIDTFLENGYTKEEMKMINETMKILNDYSLKITSTTVRVPVFNCHSESVNVEFEKTFEIEDIFKTLRNAHGVVVLDDPSSNEYPLALNVTGKDEVFVGRIRRDFSLDNGINMWIVADNIR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain
Protein sequence:
MAKDIGLDIPEPTKECDDINCPFHGELPVRGQIHVGTVVSAKMDRTVVIQQRREKLINKYQRYEKRQSKIHAHNPPCIDAKVGDIVTIAECRPLSKTKSYVVVKAEVKA

Annotated regions:
phrase: GDIVTIAECRPL
type: CONSERVED_SITE
name: Ribosomal_uS17_CS
description: Small ribosomal subunit protein uS17, conserved site
Protein sequence:
MKFAVIVFPGSNCDVDMFHAIKDELGEEVDYVWHDTENLDEYDAILLPGGFSYGDYLRCGAISRFANAMKAVQKAAEQGKPILGVCNGFQILVESGLLPGALMRNENLKFMCRTVQLRVENNETMFTSQYEKDEIINIPIAHGEGNYYCDEETLKQLEENNQIAFRYVENPNGSVSDIAGIVNEKGNVLGMMPHPERAVDELLGGAEGLKVFQSILKQWRETYVVNA

Annotated regions:
Protein sequence:
MIDSVLLFLAFSRFLYPGKHWAFADLFGDGGSFVESNCSGSKDGKYELLTAINEVIAEELKDLMTKTSQEIKSRILVIKAAEDSALQYMNFMNVIFAAQKQNVSKVTVTLMRNLQLCLSNATDCCMEPLCVVETLQVSACRGSKTLANLLIQAEIYANSSFTGNVSENATVIPNQVFQPLGSCPCNLTAGICDIRCCCDLECTPDLKQLFSGSCFAGVFGGNVNLPFDQLCSVQTTNSAPDWFPFLCVQSPLNNSPFLGYFYHGSVSSSLVSSFKIPLQTVPEKPLSGYKQGDPIMTTENEYFTIRQRSMAGQCVGNAPVAFLQNFDVKCVTSLSAYKEGLSHNVMINSGTGDTIQQNVIYGSVTDVRNFITKPEDIQRTEVLCINVTFAEYYMFIWKGKTIEEINVTVLIEELCDGGYQVGKPVRTVNISSETVTILKLWQPGLDPPNSSANASAGNLNGICSDIPANLNIHIITADVGAVEGIAQEEILGVQISFSTVIWQFQCGIICENKSSSLPITSSVQFIKVPAQPPIPMTRFQINYTEYDCNRNEVCWPQLFYPLTWYYTGFLVQEIKKADIALPEGDTSPAAPHLKHMLEIQEQLQKLETELREVTKNKEKLKKNLLELTEYTYMLRVTQAFVKRPVEYESCLHANYEEFPSLENDPLMDYTCMHRLGAKLGFISGLVHQAKIEAFEKMLWRVCKGYTILTYAELDECLEDPDTGEIRKWFVFLISFWGEQIGQKVKKICDCYHCHVYPYPNTTEERRDV

Annotated regions:
phrase: CPCNLTAGICDIRCCCDLECTPDLKQLFSGSCFAGVFGGNVNLPFDQLCSVQTTNSAPDWFPFLCVQSPLNNSPFLGYFYHGSVSSSLVSSFKIPLQTVPEKPLSGYKQGDPIMTTENEYFTIRQRSMAGQCVGNAPVAFLQNFDVKCVTSLSAYKEGLSHNVMINSGTGDTIQQNVIYGSVTDVRNFITKPEDIQRTEVLCINVTFAEYYMFIWKGKTIEEINVTVLIEE
type: DOMAIN
name: Tectonic_dom
description: Tectonic domain
Protein sequence:
MTDFDSIERALADIAAGRPVIVVDDEDRENEGDLIFAAEKATPELLAFMVRYTSGYICVPMTAADCDRLDLPPMYHTNQDRRGTAYAVTVDAREGVTTGISAADRARTIRLLADPDATAADFSRPGHVVPLRAKDGGVLRRPGHTEAAVDLARMAGLRPAGVLCEIVSQKDTGDMARRDELEVFAADHELQLITIADLIAYRRRFEKQVERVAEARIPTVHGSFRAIGYDSLVDGIEHIAMVFGEIGDGENLLVRVHSECLTGDVFGSLRCDCGPQLDAALARVAAEGRGIVLYMRGHEGRGIGLMHKLQAYQLQDNGHDTVDANLALGMPADARDYGTGAQILVDLGVKSMRLLTNNPAKRVGLEGYGLQVVDRVSLPIRPNPENLRYLRTKRDRMGHELHYLDEDAGKDLPGATGGAGVTA

Annotated regions:
phrase: ERVAEARIPTVHGSFRAIGYDSLVDGIEHIAMVFGEIGDGENLLVRVHSECLTGDVFGSLRCDCGPQLDAALARVAAEGRGIVLYMRGHEGRGIGLMHKLQAYQLQDNGHDTVDANLALGMPADARDYGTGAQILVDLGVKSMRLLTNNPAKRVGLEGYGLQVVDR
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MSTDTSIKAGIDSIRAKADDLHLAEDSSNGTQANLDKHQIKATTAVGQDNGNNAGVADHKNDKNNKNNKNNNDDDDDDEDDDVAAAAAAVGDAGSDKKKKKKKSSNKKKKKKLVSIDQSYPDGVFPEGEWQEYGLDSNKYRTTSEEMRYLDRQQNNKWEDFRKGAEIHRRVRAKAKSSIRPGMTMIEIADLIENSVRAYASADHTLKAGIGFPTGLSLNHVAAHYTPNTGDKLTLGKDDLMKVDIGVHVNGRICDSAFTMTFNEDGKYDSIMQAVKEATNTGVKEAGIDVRLNDIGAAVQEVMESYEMELDGKTYPIKCIKNLNGHNIGDFIIHSGKTVPIVANGDMTKMEEGETFAIETFGSTGNGYVLPEGECSHYALNSGVESIKPPSDKAKHLLNTIQSNFGTLPWCRRYLERTGEEKYLFALNQLVKAGIVEDYPPIVDKRGSYTAQFEHTILLHPHKKEVVTRGDDY

Annotated regions:
phrase: DLMKVDIGVHVNGRIC
type: BINDING_SITE
name: Pept_M24A_MAP2_BS
description: Peptidase M24A, methionine aminopeptidase, subfamily 2, binding site

phrase: DFRKGAEIHRRVRAKAKSSIRPGMTMIEIADLIENSVRAYASADHTLKAGIGFPTGLSLNHVAAHYTPNTGDKLTLGKDDLMKVDIGVHVNGRICDSAFTMTFNEDGKYDSIMQAVKEATNTGVKEAGIDVRLNDIGAAVQEVMESYEMELDGKTYPIKCIKNLNGHNIGDFIIHSGKTVPIVANGDMTKMEEGETFAIETFGSTGNGYVLPEG
type: DOMAIN
name: Pept_M24
description: Peptidase M24