nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSNKMWGGRFTDRPDAIMEEINVSIDVDRHLYAQDIAASKAHAAMLAAQGIITANDAKNIGKGLDTILSEIGAGKFTFKRALEDIHMNVESRLAELIGPAAGRLHTARSRNDQVATDFRLYVRDVLDETDAALASFQRALVERALEHAETVMPGFTHLQTAQPVTFGHHLMAYVEMAARDRGRFQDARKRLNESPLGAAALAGTSFPIDRHATAKKLGFDRPMANSLDAVSDRDFVLETLSAASICAVHLSRFAEEIVIWTSPLVGLVRLSDKFTTGSSIMPQKRNPDAAELVRAKTGRVIGALNGLLIVMKGLPLAYQKDMQEDKQGAMEGFAALSLAIRAMTGMVRDIVPEQDRMRAAAGEGYATATDLADWLVRTLKMPFRDAHHVTGKIVGLAAKAGVALHELPLKEMQAVEPKISRDALAVLSVESSVKSRTSYGGTAPKNVRAQAKAWLKRLEKEQKLG

Annotated regions:
phrase: YATATDLADWLVRTLKMPFRDAHHVTGKIVGLAAKAGVALHELPLKEMQAVEPKISRDALAVLSVESSV
type: DOMAIN
name: Arg_succ_lyase_C
description: Argininosuccinate lyase, C-terminal

phrase: GSSIMPQKR
type: CONSERVED_SITE
name: Fumarate_lyase_CS
description: Fumarate lyase, conserved site

phrase: GRFTDRPDAIMEEINVSIDVDRHLYAQDIAASKAHAAMLAAQGIITANDAKNIGKGLDTILSEIGAGKFTFKRALEDIHMNVESRLAELIGPAAGRLHTARSRNDQVATDFRLYVRDVLDETDAALASFQRALVERALEHAETVMPGFTHLQTAQPVTFGHHLMAYVEMAARDRGRFQDARKRLNESPLGAAALAGTSFPIDRHATAKKLGFDRPMANSLDAVSDRDFVLETLSAASICAVHLSRFAEEIVIWTSPLVGLVRLSDKFTTGSSIMPQKRNPDAAELVRAKTGRVI
type: DOMAIN
name: Fumarate_lyase_N
description: Fumarate lyase, N-terminal
Protein sequence:
MQNSEGGADSPASVALRPSAAAPPVPASPQRVLVQAASSAPKGAQMQPVSLPRVQQVPQQVQPAQHVYPAQVQYVEGGDAVYTNGAIRTAYTYNPEPQMYAPSSAASYFEAPGGAQVTVAASSPPAVPSHSMVGITMDVGGSPIVSSTGAYLIHGGMDSTRHSLAHTSRSSPATLEMAIENLQKSEGITSHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRLKPDSPLNRLQEDTQYMAMRQQPMHQKPRYRPAQKTDSLGDSGSHSSLHSTPEQTMAAQSQHHQQYIDVSHVFPEFPAPDLGSVLLQDGVTLHDVKALQLVYRRHCEATVDVVMNLQFHYIEKLWLSFWNSKASSSDGPTSLPASDEDPEGAVLPKDKLISLCQCDPILRWMRSCDHILYQALVEILIPDVLRPVPSTLTQAIRNFAKSLEGWLTNAMSDFPQQVIQTKVGVVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQCEESVVQRLEQDFKLTLQQQSSLDQWASWLDSVVTQVLKQHAGSPSFPKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAEATGETPIAVMGEFNDLASLSLTLLDKDDMGDERRGSEAGPDAHSLGEPLVKRERSDPNHSLQGI

Annotated regions:
phrase: SEGGADSPASVALRPSAAAPPVPASPQRVLVQAASSAPKGAQMQPVSLPRVQQVPQQVQPAQHVYPAQVQYVEGGDAVYTNGAIRTAYTYNPEPQMYAPSSAASYFEAPGGAQVTVAASSPPAVPSHSMVGITMDVGGSPIVSSTGAYLI
type: DOMAIN
name: RFX1_trans_act
description: RFX1 transcription activation region

phrase: HLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRLK
type: DOMAIN
name: DNA-bd_RFX
description: DNA-binding RFX-type winged-helix domain

phrase: HLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRL
type: DOMAIN
name: DNA-bd_RFX
description: DNA-binding RFX-type winged-helix domain
Protein sequence:
WKPRQTGSGFSLAAIGAARPIPWKTGDPVWVPQWHLSSEKLEAVIQLVEEQLKLGHIDPSTSPWNTPIFVIKKKSGKWRLLHDLRPINEQMNLFGPVQRGLPVLSALPRGWNLIIIDIKDCFFSIPLCPRDRPRFAFTIPSINSDEPDNRYQWKVLPQGMSNSPTMCQLYVQEALLPVREQFPSLILLLYMDDILLCHKELTMLQKAYPFLLKTLSQWGLQIATEKVQISDTGQFLGSVVSPDKIVPQKVEIRRDHLHTLNNFQKLLGDINWLRPFLKIPSAELRPLFWYLEGDPHISSPRTLTLAANQALQKVEKALQNAQLQAIEDSQPFSLCVFKTAQLPTAVLWQNGPLLWIHPNVSPAKIIDWYPDAIAQLALKGLKAAITHFGRSPYLLIVPYTAAQVQTLAATSNDWAVLVTSFSGKIDNHYPKHPILQFAQNQSVVFPQITVRNPLKNGIVVYTDGSKTGIGAYVANGKVVSKQYNENSPRMVECLVVLEVLKTFLEPLNIVSDSCYVVNAVNLLEGGWSDKPSSRVANIFQQIQLVLLSRSPVYITHVRAHSGLPTSAPWLSGNDLADKATSGGCSLSSPVEAAQEIFITTFHVTAEHYRSRNSLTRKEARDIVTQCQSCCEFLPVPHVGINPRGIRPLQVWQMDVTHVSSFGKLQYLHVSIDTCSGIMFASPLTGEKASHVIQHCLEAWSAWGKPRLLKTDNGPAYTSQKFQQFCRQMDVTHLTGLPYNPQGQGIVERAHRTLKTYLIKQKRELEEILPQHQESLSMALFTLNFLNIDVHGHTAAERQCSEPDRPNEMVKWKNVLHNKWYGPDPILIRSRGAVCVFHRMKTTHFGYQKDSPEKSRLTKGIPDVPRLW

Annotated regions:
phrase: PQKVEIRRDHLHTLNNFQKLLGDINWLRPFLKIPSAELRPLFWYLEGDPHISSPRTLTLAANQAL
type: DOMAIN
name: RVT_thumb
description: Reverse transcriptase thumb

phrase: VKWKNVLHNKWYGPDPILIRSRGAVC
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: GIVVYTDGSKTGIGAYVANGKVVSKQYNENSPRMVECLVVLEVLKTFLEPLNIVSDSCYVVNAVNLLEGGWSDKPSSRVANIFQQIQLVLLSRSPVYITHVRAHSGLPTSAPWLSGNDLADKATSGG
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: EMVKWKNVLHNKWYGPDPILIRSRGAVCVFHRMKTTHFGYQKDSPEKSRLTKGIP
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: RGIRPLQVWQMDVTHVSSFGKLQYLHVSIDTCSGIMFASPLTGEKASHVIQHCLEAWSAWGKPRLLKTDNGPAYTSQKFQQFCRQMDVTHLTGLPYNPQGQGIVERAHRTLKTYLIKQKRELEEILPQHQESLSMALFTLNFLNIDVHGHTAAERQCSE
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: FHVTAEHYRSRNSLTRKEARDIVTQCQSC
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: RPLQVWQMDVTHVSSFGKLQYLHVSIDTCSGIMFASPLTGEKASHVIQHCLEAWSAWGKPRLLKTDNGPAYTSQKFQQFCRQMDVTHLTGLPYN
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: LKLGHIDPSTSPWNTPIFVIKKKSGKWRLLHDLRPINEQMNLFGPVQRGLPVLSALPRGWNLIIIDIKDCFFSIPLCPRDRPRFAFTIPSINSDEPDNRYQWKVLPQGMSNSPTMCQLYVQEALLPVREQFPSLILLLYMDDILLCHKELTMLQKAYPFLLKTLSQWGLQIATEKVQISDTGQFLGSV
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: LKNGIVVYTDGSKTGIGAYVANGKVVSKQYNENSPRMVECLVVLEVLKTFLEPLNIVSDSCYVVNAVNLLEGGWSDKPSSRVANIFQQIQLVLLSRSPVYITHVRAHSGLPTSAPWLSGNDLADKATSGGC
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: IKKKSGKWRLLHDLRPINEQMNLFGPVQRGLPVLSALPRGWNLIIIDIKDCFFSIPLCPRDRPRFAFTIPSINSDEPDNRYQWKVLPQGMSNSPTMCQLYVQEALLPVREQFPSLILLLYMDDILLCHKELTMLQKAYPFLLKTLSQWGLQIATEKVQISDTGQFLG
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain
Protein sequence:
MGKYFGTDGVRGIANSELTPELAFKIGRFGGYVLTKDKERPKVLIGRDTRISGHMLEGALVAGLLSIGAEVMRLGVISTPGVAYLTKALGAQAGVMISASHNPVQDNGIKFFGPDGFKLSDEQELEIEALLDSEQDTLPRPIGKDLGQVNDYFEGGQKYLQYLKQTVDEDFSGIHVALDCAHGATSALATHLFADLDADVSTMGASPNGLNINDGVGSTHPEALAAFVKEKGADVGLAFDGDGDRLIAVDENGQIVDGDQIMYICAKYLNEQGRLKHQTVVSTVMSNLGFYKALEAQGIKSVQTAVGDRYVVEEMKKNGYNLGGEQSGHIIFLDYNTTGDGLLTALQLVNIMKVTKKPLSELAGEMKKYPQKLVNVKVTDKQEAIANEEVQRVIREVEEEMAGNGRILVRPSGTEPLVRVMAEAPTNELCDQYVERIAAVIRERFGA

Annotated regions:
phrase: GVMISASHN
type: CONSERVED_SITE
name: A-D-PHexomutase_CS
description: Alpha-D-phosphohexomutase, conserved site

phrase: KYLQYLKQTVDEDFSGIHVALDCAHGATSALATHLFADLDADVSTMGASPNGLNINDGVGSTHPEALAAFVKEKGADVGLAFDGDGDRLIAVDEN
type: DOMAIN
name: A-D-PHexomutase_a/b/a-II
description: Alpha-D-phosphohexomutase, alpha/beta/alpha domain II

phrase: KYFGTDGVRGIANSELTPELAFKIGRFGGYVLTKDKERPKVLIGRDTRISGHMLEGALVAGLLSIGAEVMRLGVISTPGVAYLTKALGAQAGVMISASHNPVQDNGIKFFGPDGFKLSDEQELEIEALLDSE
type: DOMAIN
name: A-D-PHexomutase_a/b/a-I
description: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I

phrase: DGDQIMYICAKYLNEQGRLKHQTVVSTVMSNLGFYKALEAQGIKSVQTAVGDRYVVEEMKKNGYNLGGEQSGHIIFLDYNTTGDGLLTALQLVNIMKVTKKPLSELAGEMKK
type: DOMAIN
name: A-D-PHexomutase_a/b/a-III
description: Alpha-D-phosphohexomutase, alpha/beta/alpha domain III

phrase: LVNVKVTDKQEAIANEEVQRVIREVEEEMAGNGRILVRPSGTEPLVRVMAEAPTNELCDQYVERIA
type: DOMAIN
name: A-D-PHexomutase_C
description: Alpha-D-phosphohexomutase, C-terminal
Protein sequence:
MSLPGLDLTQPSADNQFAPAPPTQVSLSKGSEWRFEVAFGTVIRVKLLAGTAELFGTELAPSQTYTFSGTKGAIYTWHGCTLEVGAGDTGPSVDGLAPGGLSGATPRGLGAGGCQSEYTAEETPMVEYANVHFALETMRQEAKATGKDGPRVLILGPENAGKTSVAKILTAYATKVERQPIVVNLDPTEGMLSVPGTLTATAFRTMMDVEEGWGSSPMSGPSAVPVKLPLVYFYPMQNPLEAEGSVYRPIVSRLALSVMGRMAEDEEARETGIIVDTPGALSQGKPGSLEMINHIVTEFSITTILVIGSERLYSLMMKNYDNKPTSSASAVASDERITVVKLSKSGGCVDRDAAFMKGVRESQIRTYFFGNPIPSTASAALSLSASSTTNVTLSPHAQQLDFNTLSIYNYTIASLEEDEDEYDPSQLGAGDSFLPGGGNDAEASQAQQDEPARATPLPGIVSSIESATPPVASNVPLKKVLPPAPSTLANSLIAITNAPTTASAAEVRDASIMGFLYVAEVDSEKGKIRALAPVGGRVPPRAIVWGKKWPGEVVGLVG

Annotated regions:
phrase: GPENAGKTSVAKILTAYATKVERQPIVVNLDPTEGMLSVPGTLTATAFRTMMDVEEGWGSSPMSGPSAVPVKLPLVYFYPMQNPLEAEGSVYRPIVSRLALSVMGRMAEDEEARETGIIVDTPGALSQGKPGSLEMINHIVTEFSITTILVIGSERLYSLMMKNYDNKPTSSASAVASDERITVVKLSKSGGCVDRDAAFMKGVRESQIRTYF
type: DOMAIN
name: CLP1_P
description: Polyribonucleotide 5'-hydroxyl-kinase Clp1, P-loop domain

phrase: LSPHAQQLDFNTLSIYNYTIASLEEDEDEYDPSQLGAGDSFLPGGGNDAEASQAQQDEPARATPLPGIVSSIESATPPVASNVPLKKVLPPAPSTLANSLIAITNAPTTASAAEVRDASIMGFLYVAEVDSEKGKIRALAPVGGRVPPRAIVWGKKW
type: DOMAIN
name: Clp1_C
description: Pre-mRNA cleavage complex subunit Clp1, C-terminal

phrase: LSKGSEWRFEVAFGTVIRVKLLAGTAELFGTELAPSQTYTFSGTKGAIYTWHGCTLEVGAGDTGPSVDGLAPGGLSGATPRGLGAGGCQSEYTAEETPMVEYANVHFALETMRQE
type: DOMAIN
name: Clp1_N
description: Clp1, N-terminal beta-sandwich domain
Protein sequence:
MASLLARPQQAVVRAAKPAAARPLRLVVRASAQKPQQQLAQLAKPALSAIVANALMAMPAAAEAGKIFDFNLTLPVMAGEFLLLMVFLEKTWFTPVGKVLDERDNLIRSKLGSVKDNTGDVDKLVLEAETILKSARSDVSAMINTKKAAKQSELDKTYNEAKAKITAEVESSIAGLEQESASMLKSLDAQVDKISAEVLKRVLPEGVRV

Annotated regions:
Protein sequence:
MSDLKRSLSEAAAAAFQAAGLSPDFGRVTASDRPDLADFQCNGALAAAKSAKRNPREIAVQVVDVLKADPRLASVEIAGVGFINMRVSTDALSIRANEIAADPRAGAEPLAHPRRVLVDYAGPNVAKPMHVGHLRASIIGESVKRLYRFRGDDVVGDAHFGDWGFQMGLLISAIMEEDAFIRALLERLVEAPREFSKADEDKVMSEFAQRVTLDDLDRLYPAASARQKEDPEFKEKARKATAELQNGRFGYRLLWRHFVNISRVALEREFHALGVDFDLWKGESDVQDLIAPMVRQLEVKGLLVDDQGARIVRVARPGETKKKKLPDGSVVEVESPDPLLVVSSEGSAMYGTTDLATILDRRKSFDPHLILYCVDQRQADHFEQVFRAAYLAGYAEPGSLEHIGFGTMNGSDGKPFKTRAGGVLKLHDLIEMAREKARERLREAGLGAELSQEAFEETAHKVGIAALKFADLQNFRGTSYVFDLDRFTSFEGKTGPYLLYQSVRIKSILRKAAEQKVVSGAIIVGEPAERDLTLLLDAFEGALSEAYDKKAPNFIAEHAYKLAQTFSKFYAACPILSADNDATRASRLALAETTLKQLELALDLLGIEAPERM

Annotated regions:
phrase: SDLKRSLSEAAAAAFQAAGLSPDFGRVTASDRPDLADFQCNGALAAAKSAKRNPREIAVQVVDVLKADPRLASVEIAGVGFINMR
type: DOMAIN
name: Arg-tRNA-synth_N
description: Arginyl tRNA synthetase N-terminal domain

phrase: LLYQSVRIKSILRKAAEQKVVSGAIIVGEPAERDLTLLLDAFEGALSEAYDKKAPNFIAEHAYKLAQTFSKFYAACPILSADNDATRASRLALAETTLKQLELALDLLGIEAPER
type: DOMAIN
name: DALR_anticod-bd
description: DALR anticodon binding

phrase: SEFAQRVTLDDLDRLYPAASARQKEDPEFKEKARKATAELQNGRFGYRLLWRHFVNISRVALEREFHALGVDFDLWKGESDVQDLIAPMVRQLEVKGLLVDDQGARIVRVARPGETKKKKLPDGSVVEVESPDPLLVVSSEGSAMYGTTDLATILDRRKSFDPHLILYCVDQRQADHFEQVFRAAYLAGYAEPGSLEHIGFGTMNGSDGKPFKTRAGGVLKLHDLIEMAREKARERLREAGLGAELSQEAFEETAHKVGIAALKFADLQNFRGTSYVF
type: DOMAIN
name: ArgRS_core
description: Arginyl-tRNA synthetase, catalytic core domain

phrase: LAHPRRVLVDYAGPNVAKPMHVGHLRASIIGESVKRLYRFRGDDVVGDAHFGDWGFQMGLLISAIM
type: DOMAIN
name: ArgRS_core
description: Arginyl-tRNA synthetase, catalytic core domain

phrase: LLYQSVRIKSILRKAAEQKVVSGAIIVGEPAERDLTLLLDAFEGALSEAYDKKAPNFIAEHAYKLAQTFSKFYAACPILSADNDATRASRLALAETTLKQLELALDLLGIEAPER
type: DOMAIN
name: DALR_anticod-bd
description: DALR anticodon binding

phrase: LKRSLSEAAAAAFQAAGLSPDFGRVTASDRPDLADFQCNGALAAAKSAKRNPREIAVQVVDVLKADPRLASVEIAGVGFINM
type: DOMAIN
name: Arg-tRNA-synth_N
description: Arginyl tRNA synthetase N-terminal domain

phrase: RVLVDYAGPNVAKPMHVGHLRASIIGESVKRLYRFRGDDVVGDAHFGDWGFQMGLLISAIMEEDAFIRALLERLVEAPREFSKADEDKVMSEFAQRVTLDDLDRLYPAASARQKEDPEFKEKARKATAELQNGRFGYRLLWRHFVNISRVALEREFHALGVDFDLWKGESDVQDLIAPMVRQLEVKGLLVDDQGARIVRVARPGETKKKKLPDGSVVEVESPDPLLVVSSEGSAMYGTTDLATILDRRKSFDPHLILYCVDQRQADHFEQVFRAAYLAGYAEPGSLEHIGFGTMNGSDGKPFKTRA
type: DOMAIN
name: ArgRS_core
description: Arginyl-tRNA synthetase, catalytic core domain

phrase: PNVAKPMHVGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site
Protein sequence:
MKRQSALVVFSGGQDSTTCLFWAMKHYEYVETVTFSYGQRHSQELEVAKEIAAEQGVKHHILDMSLLGQITENALTSDIAIETKDGEVPNTFVDGRNHLFLSFAAVLAKQRKIRDIVTGVCQTDFSGYPDCRDVFVKSLNVTLNLAMDYEFVIQTPLMWLDKAETWELADQLGKFDYVRQKTLTCYNGIRGTGCRQCPACHLRQAGLEKYLSQKGKN

Annotated regions:
Protein sequence:
MNQPTSRSGLTTFTVIIIGLLALFLLIGGIWLATLGGSIYYIIAGVLLLIVAWQLYKRASTALWFYAALMLGTIIWSVWEVGTDFWALAPRLDILGILGLWLLVPAVTRGINNLGSSKVALSSTLAIAIVLMVYSIFNDPQEINGEIKTPQPETAQAVPGVAESDWPAYGRTQAGVRYSPLKQINDQNVKDLKVAWTLRTGDLKTDNDSGETTNQVTPIKIGNNMFICTAHQQLIAIDPATGKEKWRFDPKLKTDKSFQHLTCRGVMYYDANNTTEFATSLQSKKSSSTQCPRKVFVPVNDGRLVAVNADTGKACTDFGQNGQVNLQEFMPYAYPGGYNPTSPGIVTGSTVVIAGSVTDNYSNKEPSGVIRGYDVNTGKLLWVFDTGAADPNAMPGEGTTFVHNSPNAWAPLAYDAKLDIVYVPTGVGTPDIWGGDRTELKERYANSMLAINASTGKLVWNFQTTHHDLWDMDVPSQPSLADIKNKAGQTVPAIYVLTKTGNAFVLDRRNGQPIVPVTEKPVPQTVKRGPQTKGEFYSKTQPFSDLNLAPQDKLTDKDMWGATMLDQLMCRVSFKRLNYDGIYTPPSENGTLVFPGNLGVFEWGGMSVNPDRQVAVMNPIGLPFVSRLIPADPNRAQTAKGAGTEQGVQPMYGVPYGVEISAFLSPLGLPCKQPAWGYVAGVDLKTHEVVWKKRIGTIRDSLPNLFQLPAVKIGVPGLGGSISTAGNVMFVGATQDNYLRAFNVTNGKKLWEARLPAGGQATPMTYEINGKQYVVIMAGGHGSFGTKMGDYLVAYALPDNK

Annotated regions:
phrase: ANSMLAINASTGKLVWNFQTTHHDLWDM
type: REPEAT
name: PQQ_repeat
description: Pyrrolo-quinoline quinone repeat

phrase: YSNKEPSGVIRGYDVNTGKLLWVFDTGAADPNA
type: REPEAT
name: PQQ_repeat
description: Pyrrolo-quinoline quinone repeat

phrase: NNMFICTAHQQLIAIDPATGKEKWRFDPKL
type: REPEAT
name: PQQ_repeat
description: Pyrrolo-quinoline quinone repeat

phrase: NVMFVGATQDNYLRAFNVTNGKKLWEARLPAGGQATP
type: REPEAT
name: PQQ_repeat
description: Pyrrolo-quinoline quinone repeat

phrase: WAPLAYDAKLDIVYVPTGVGT
type: CONSERVED_SITE
name: Quinoprotein_DH_CS
description: Quinoprotein dehydrogenase, conserved site

phrase: DWPAYGRTQAGVRYSPLKQINDQNVKDL
type: CONSERVED_SITE
name: Quinoprotein_DH_CS
description: Quinoprotein dehydrogenase, conserved site

phrase: TPIKIGNNMFICTAHQQLIAIDPATGKEKWRF
type: REPEAT
name: PQQ_b-propeller_rpt
description: Pyrrolo-quinoline quinone beta-propeller repeat

phrase: GIVTGSTVVIAGSVTDNYSNKEPSGVIRGYDVNTGKLLWVF
type: REPEAT
name: PQQ_b-propeller_rpt
description: Pyrrolo-quinoline quinone beta-propeller repeat

phrase: YDAKLDIVYVPTGVGTPDIWGGDRTELKERYANSMLAINASTGKLVWNF
type: REPEAT
name: PQQ_b-propeller_rpt
description: Pyrrolo-quinoline quinone beta-propeller repeat

phrase: SISTAGNVMFVGATQDNYLRAFNVTNGKKLWEA
type: REPEAT
name: PQQ_b-propeller_rpt
description: Pyrrolo-quinoline quinone beta-propeller repeat

phrase: SSTQCPRKVFVPVNDGRLVAVNADTGKACTDF
type: REPEAT
name: PQQ_b-propeller_rpt
description: Pyrrolo-quinoline quinone beta-propeller repeat
Protein sequence:
MDWKKYGYNTRALHAGYEPPEQATGSRAVPIYQTTSYVFRDSDHAARLFALEEPGFIYTRIGNPTVSVLEERIAALEEGVGALAVASGQAAITYAILNIAGPGDEIVSGSALYGGTYNLFRHTLYKKSGIIVKFVDETDPKNIEEAITEKTKAVYLETIGNPGLTVPDFEAIAEIAHRHGVPLIVDNTVAPYIFRPFEHGADIVVYSATKFIGGHGTSIGGLIVDSGKFDWTNGKFPELVEPDPSYHGVSYVETFKEAAYIAKCRTQLLRDLGSCMSPFNAFLFILGLETLSLRMKKHCENALKIVEFLKSHPAVSWVNYPIAEGNKTRENALKYLKEGYGAIVTFGVKGGKEAGKKFIDSLTLISHLANIGDARTLAIHPASTTHQQLTEEEQLKTGVTPDMIRLSVGIEDVEDIIADLDQALRKSQEG

Annotated regions:
phrase: DIVVYSATKFIGGH
type: CONSERVED_SITE
name: Cys_met_metab_PP
description: Cys/Met metabolism enzyme, pyridoxal-phosphate attachment site
Protein sequence:
MMESGEALLKKLDGRLSGLRGRLTPDTGMDKITWFRAGGPAQVLFQPSDEEDLSAFLKAVPEEIPLLVVGIGSNLLVRDGGVPGFVVRLSAKGFGEVEQVCDTQLRAGAAAPDKRVAAAALEAGLADFHFYHGIPGGIGGALRMNAGANGVETRERVVEVRALDRKGEVHVLSNADMGYAYRHSSASPDLIFTSVLFEGVPGERDDIRRAMDEVQHHRETVQPVREKTGGSTFKNPEGTSAWKEIDKAGCRGLRVGGAQMSEMHCNFMINTGNATGHDLETLGETVRARVFENSGIRLHWEIKRLGLFREGEQIEEFLGKII

Annotated regions:
phrase: DIRRAMDEVQHHRETVQPVREKTGGSTFKNPEGTSAWKEIDKAGCRGLRVGGAQMSEMHCNFMINTGNATGHDLETLGETVRARVFENSGIRLHWEIK
type: DOMAIN
name: MurB_C
description: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal

phrase: RAGGPAQVLFQPSDEEDLSAFLKAVPEEIPLLVVGIGSNLLVRDGGVPGFVVRLSAKGFGEVEQVCDTQLRAGAAAPDKRVAAAALEAGLADFHFYHGIPGGIGGALRMNAGANGVETRERVVEVRALDRKGEVHVLSNADMGYAYRHSSASPDLIFTSVLFEGVP
type: DOMAIN
name: FAD-bd_PCMH
description: FAD-binding domain, PCMH-type

phrase: QVLFQPSDEEDLSAFLKAVPEEIPLLVVGIGSNLLVRDGGVPGFVVRLSAKGFGEVEQVCDTQLRAGAAAPDKRVAAAALEAGLADFHFYHGIPGGIGGALRMNAGANGVETRERVVEVRALDRKGEVHV
type: DOMAIN
name: Oxid_FAD_bind_N
description: FAD linked oxidase, N-terminal
Protein sequence:
MSNVDESQPLITHLVELRNRLLRCVICVVLVFVALVYFSNDIYHFVAAPLTAVMPKGATMIATNIQTPFFTPIKLTAIVAIFISVPYLLYQIWAFIAPALYQHEKRMIYPLLFSSTILFYCGVAFAYYIVFPLVFSFFTQTAPEGVTIATDISSYLDFALALFLAFGVCFEVPIAIILLCWTGITTVKALSEKRPYIIVAAFFIGMLLTPPDVFSQTLLAIPMCLLFELGLLVARFYQPKDDESAVKNNDESEKTQ

Annotated regions:
phrase: YLDFALALFLAFGVCFEVP
type: CONSERVED_SITE
name: Sec-indep_translocase_CS
description: Sec-independent periplasmic protein translocase, conserved site
Protein sequence:
MTKALYLDCHAGIAGDMLLSALVDLGAHPEDIESELKKLPLDQFKLHFQKRVKQGIHAMTLNIDVKESNHHRHVNDIFKMIDDSTLPERVKYRSKKIFEIIGQAEAKIHGMSFEEVHFHEVGAMDSIIDIIGGCIALEQLGINTLYCSAIPTGHGKIHIAHGIYPIPAPATAEILKGIPIAHFDVQSELTTPTGAAFAKGLVSSFGPFPSATIQHIGYGAGSKDFNFPNILRVIQFDSEFEQQDSVQVIECQIDDMTPEALGDFMNNALEQGALDAYYTPIFMKKSRPSTQLTLICKLHDKIYFEQLILQETSSLGVRSTSVNRKILNRAFKILSTQHGTVSIKFGLQNGKIMKMKPEYEDLKKMAKTTNQPFQVIHNEVLQQLYQTYRIGDILQ

Annotated regions:
Protein sequence:
MIGFSAFILRNYYAAIGWNEDNLYSSLTRTSSALLDFQLPQSLILQLANSPTPIFFTSYALDALPQLNGSISYITTSMPLDEIGSGRATAFKNVIERFRVFPPPKRPQPKDEVWLGGKRIEGRDYLLYSRLHLPSLHLSGLATTRLTPTLQAHLAFLSQPAHPTSTRPTPPQTPPSHTRQPSEPSTPAPSPTPGNVFISLQHDTGRYCGEYTYSVQDGMVGLRTLYNFGWHGDEESEVDKKERREREGKRIDEEEMMEGGLKGRFSAGGEVYFSAKQRSFGISTGLRFTTVPPTLPLPLNAPVPSPPTTLTLLYNPLIGFLSSAYSAQVSPTVALATRFGVNVYSYESDLSVGGEWWIGRRRGKRGLTTDAEPQLDAESRDPVVTGIEENRELTEKMAQRASLRQVTLRDEIGEDVHAEKELYSPIPVMTDVNAGELAQQISPRLQPQQDLDDERDGVLKARLSGNWQFALLYEARIRNCLVSAGVLADLTGRQHPIRSIGLEVQYFS

Annotated regions:
Protein sequence:
MEMEQEKMNLSQELSADSASYNCSACHGDETWSYNHPIRGRAKSRSLSASPALGSTKEFRRTRSLHGPCPVTTFGPKACVLQNPQTIMHIQDPASQRLTWNKSPKSVLVIKKIRDASLLQPFKELCIYLMEENNMIVYVEKKVLEDPAIVSDENFGPVKKKFCTFREDYDDISNQIDFIICLGGDGTLLYASSLFQGSVPPVMAFHLGSLGFLTPFNFENFQSQVNQVIEGNAAVILRSRLKVRVVKEPRDKKTAIHNGLSENGLDTEGGKQAMQYQVLNEVVIDRGPSSYLSNVDVYLDGHLITTVQGDGVIVSTPTGSTAYAAAAGASMVHPNVPAIMVTPICPHSLSFRPIVVPAGVELKIMLSPEARNTAWVSFDGRKRQEIRHGDSISITTSCYPLPSICVCDPVSDWFESLAQCLHWNVRKKQAHFPEDEEDS

Annotated regions:
Protein sequence:
MNTERTLVLIKPDGVRRGLIGEIISRFERKGLKIKALKMLRLTREKAEEFYSVHRGKPFFVSLIEFMTSGPIIAMILEGDMAISVVRRMIGPTDGREAPPGTIRGDYSLSKSQNVVHASDSPESAMREIRVIFKDDEIIDW

Annotated regions:
phrase: TERTLVLIKPDGVRRGLIGEIISRFERKGLKIKALKMLRLTREKAEEFYSVHRGKPFFVSLIEFMTSGPIIAMILEGDMAISVVRRMIGPTDGREAPPGTIRGDYSLSKSQNVVHASDSPESAMREIRVIFKDDEII
type: DOMAIN
name: NDK-like_dom
description: Nucleoside diphosphate kinase-like domain

phrase: NVVHASDS
type: ACTIVE_SITE
name: Nucleoside_diP_kinase_AS
description: Nucleoside diphosphate kinase, active site

phrase: ERTLVLIKPDGVRRGLIGEIISRFERKGLKIKALKMLRLTREKAEEFYSVHRGKPFFVSLIEFMTSGPIIAMILEGDMAISVVRRMIGPTDGREAPPGTIRGDYSLSKSQNVVHASDSPESAMREIRVIFKDDE
type: DOMAIN
name: NDK-like_dom
description: Nucleoside diphosphate kinase-like domain
Protein sequence:
MSVTAASGFVASGTAAGIKPDGRLDLSLVATEDGRPVPAAAVFTQNQMTAAPVVTTRNHLLRTTGHAAAVVLNSGNANAANGRRGVDDAKRMCAATAAELGCEAHEVLVCSTGLIGIPLPIDAIEAGVPALAAARAAGEDAGLAAADAILTTDTVRKLSVADGPGFVVGGMAKGAAMLAPNMATMLAVLTTDAEATPALLKSALTAALPSSFNSLSVDGCTSTNDTVILMASGRAGPVEPADLIAAVTAVCEDLAAQMAGDAEGATKVVRVVVEGAVDDHEAERGARKVAESQLVKCSWYGKDPYWGRVASELGSAGISFDPDKLRISYGDHVVADGGINADHDADALSAYMDQRHIEVTAQLGLGTGRATVLTNDLTHAYVDENMGTS

Annotated regions:
Protein sequence:
MRLFDAMPPYLTYQAPLSLIIFHKMVFAIRIRQFHTTLVSAEKNGLQKLIPPRLKTIWNQMLVETKGAGNGPERFEMIRQKYKALTADEIQKYKNKLQEQFDAEKKRFMETLRSFTPTEIDSENRRRSKEAHSTGSRYYRLRHPDVPKKPSSAFILFYKELRNNPKLRQELGIPEAISTLVEETQNASKAWKELAEDKKKPFIDKSKALKEQYDKFMKEAGFR

Annotated regions:
phrase: VPKKPSSAFILFYKELRNNPKLRQELGIPEAISTLVEETQNASKAWKELAEDKKKPFIDKSKALKEQYDKFMK
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain

phrase: PKKPSSAFILFYKELRNNPKLRQELGIPEAISTLVEETQNASKAWKELAEDKKKPFIDKSKALKEQYDKFMKEA
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain

phrase: VPKKPSSAFILFYKELRNNPKLRQELGIPEAISTLVEETQNASKAWKELAEDKKKPFIDKSKALKEQYDKFMKEAG
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain
Protein sequence:
MFTARVARPMAGDDAPAASSGSTGSSAPPASSAADCVLEVRGVGKSFPGVVALDGVQFRVRRGTVHALMGENGAGKSTLMKIIAGVYTPDQGEILINGEPVVLNGPLDALDRGIAMIHQELNLMPYMTVAENIWIRREPKNRFGLIDHAALRRQTAELFERLSIDIDPETDVRTLTVASRQMVEIAKAVSFDSDVLIMDEPTSALTDKEVTHLFRIIRQLREQGKGIVYITHKMNELFEIADEFSVFRDGKYIGTHASSDVTRDDIIRMMVGREITQMFPKEEVPIGDVVLSVKNLGVDGVFRDVSFELRAGEILGVAGLVGSGRSNVAEALFGVVPATSGEIRIDGKPVRITTPGQAMKHGMAFLTEDRKDTGCFLNLDLLANMEAAVLSNRYVKFNFVRQAQLKRDCEEMSRMLRVKSPGLHEEIQNLSGGNQQKVLIGRWLLTQPRILILDEPTRGIDVGAKAEIHRLVSALAGKGVAVLMISSEMPEVLGMSDRVMVMHEGRMTGIVDRKDADQVRIMDLASR

Annotated regions:
phrase: LSGGNQQKVLIGRW
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: LEVRGVGKSFPGVVALDGVQFRVRRGTVHALMGENGAGKSTLMKIIAGVYTPDQGEILINGEPVVLNGPLDALDRGIAMIHQELNLMPYMTVAENIWIRREPKNRFGLIDHAALRRQTAELFERLSIDIDPETDVRTLTVASRQMVEIAKAVSFDSDVLIMDEPTSALTDKEVTHLFRIIRQLREQGKGIVYITHKMNELFEIADEFSVFRDGKYIGTHASSDVTRDDIIRMMVGR
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: RDVSFELRAGEILGVAGLVGSGRSNVAEALFGVVPATSGEIRIDGKPVRITTPGQAMKHGMAFLTEDRKDTGCFLNLDLLANMEAAVLSNRYVKFNFVRQAQLKRDCEEMSRMLRVKSPGLHEEIQNLSGGNQQKVLIGRWLLTQPRILILDEP
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: LDGVQFRVRRGTVHALMGENGAGKSTLMKIIAGVYTPDQGEILINGEPVVLNGPLDALDRGIAMIHQELNLMPYMTVAENIWIRREPKNRFGLIDHAALRRQTAELFERLSIDIDPETDVRTLTVASRQMVEIAKAVSFDSDVLIMDEPT
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: RGTVHALMGENGAGKSTLMKIIAGVYTPDQGEILINGEPVVLNGPLDALDRGIAMIHQELNLMPYMTVAENIWIRREPKNRFGLIDHAALRRQTAELFERLSIDIDPETDVRTLTVASRQMVEIAKAVSFDSDVLIMDEPTSALTDKEVTHLFRIIRQLREQGKGIVYITHKMNELFEIADEFSVFRDG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: AGEILGVAGLVGSGRSNVAEALFGVVPATSGEIRIDGKPVRITTPGQAMKHGMAFLTEDRKDTGCFLNLDLLANMEAAVLSNRYVKFNFVRQAQLKRDCEEMSRMLRVKSPGLHEEIQNLSGGNQQKVLIGRWLLTQPRILILDEPTRGIDVGAKAEIHRLVSALAGKGVAVLMISSEMPEVLGMSDRVMVMHEG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VPIGDVVLSVKNLGVDGVFRDVSFELRAGEILGVAGLVGSGRSNVAEALFGVVPATSGEIRIDGKPVRITTPGQAMKHGMAFLTEDRKDTGCFLNLDLLANMEAAVLSNRYVKFNFVRQAQLKRDCEEMSRMLRVKSPGLHEEIQNLSGGNQQKVLIGRWLLTQPRILILDEPTRGIDVGAKAEIHRLVSALAGKGVAVLMISSEMPEVLGMSDRVMVMHEGRMTGIVDRKDADQVRIM
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain
Protein sequence:
MMKACGFDIGLDHPFFLIAGPCVIESRELAFETAGRLKEITGKLGVSFIYKSSFDKANRSSGKSFRGPGMDEGLKILADVRAQLDVPVLTDVHDIDQVAPVAAVVDMLQTPAFLCRQTDFIRACAATLKPVNIKKGQFLAPHDMLQVARKARDAALEAGGDGNNILVCERGASFGYNNLVSDMRSLAIMRETDCPVVFDATHSVQLPGGQGASSGGQREFVPVLARAAVAVGVAGLFMETHPNPACAMSDGPNAVPLDRMAELLESLVALDRVTKRSGFLENQFV

Annotated regions:
phrase: IGLDHPFFLIAGPCVIESRELAFETAGRLKEITGKLGVSFIYKSSFDKANRSSGKSFRGPGMDEGLKILADVRAQLDVPVLTDVHDIDQVAPVAAVVDMLQTPAFLCRQTDFIRACAATLKPVNIKKGQFLAPHDMLQVARKARDAALEAGGDGNNILVCERGASFGYNNLVSDMRSLAIMRETDCPVVFDATHSVQLPGGQGASSGGQREFVPVLARAAVAVGVAGLFMETHPNPACAMSDGPNAVPLDRMAELLESLVAL
type: DOMAIN
name: DAHP1/KDSA
description: DAHP synthetase I/KDSA
Protein sequence:
MAHKKGTGSTRNGRDSNAQRLGVKKFGGEVVRSGSIIVRQRGTKFHPGVNVGRGGDDTLFALIDGVVTFERKGKGGKKVSVYPAGEAA

Annotated regions:
phrase: GSIIVRQRGTKFHP
type: CONSERVED_SITE
name: Ribosomal_bL27_CS
description: Large ribosomal subunit protein bL27, conserved site
Protein sequence:
MGDYGFGVLVQSNTGNKSAFPVRFHPHLQPPHHHQNATPSPAAFINNNTAANGSSAGSAWLFPAPATHNIQDEILGSEKAKSQQQEQQDPLEKQQLSPSPGQEAGILPETEKAKSEENQGDNSSENGNGKEKIRIESPVLTGFDYQEATGLGTSTQPLTSSASSLTGFSNWSAAIAPSSSTIINEDASFFHQGGVPAASANNGALLFQNFPHHVSPGFGGSFSPQIGPLSQHHPHHPHFQHHHSQHQQQRRSPASPHPPPFTHRNAAFNQLPHLANNLNKPPSPWSSYQSPSPTPSSSWSPGGGGYGGWGGSQGRDHRRGLNGGITPLNSISPLKKNFASNHIQLQKYARPSSAFAPKSWMEDSLNRADNIFPFPDRPRTFDMHSLESSLIDIMRAENDTIKGRLNYSYPGSDSSLLINARTYGRRRGQSSLFPMEDGFLDDGRGDQPLHSGLGSPHCFSHQNGERVERYSRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESSVQALIDACIEEDGKLYLCVSSPTIKDKPVQIRPWNLSDSDFVMDGSQPLDPRKTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGEIDKRVEVKPYVLDDQLCDECQGARCGGKFAPFFCANVTCLQYYCEYCWAAIHSRAGREFHKPLVKEGGDRPRHISFRWN

Annotated regions:
phrase: RKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESSVQALIDACIEEDGKLYLCVSSPTIKDKPVQI
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: KTIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGEIDKRVEV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: KRVEVKPYVLDDQLCDECQGARCGGKFAPFFCANVTCLQYYCEYCWAAIHSRAGREFHKPLV
type: DOMAIN
name: CEBP_ZZ
description: Cytoplasmic polyadenylation element-binding protein, ZZ domain

phrase: TIFVGGVPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQLQHGEIDK
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: KVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESSVQALIDACIEEDGKLYL
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: SRKVFVGGLPPDIDEDEITASFRRFGPLIVDWPHKAESKSYFPPKGYAFLLFQDESSVQALIDACIEEDGKLYLCVSSPTIKDKPVQIR
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain