nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MPVMKGLLAPQNTFLDTIATRFDGTHSNFILANAQVAKGFPIVYCSDGFCELAGFARTEVMQKSCSCKFLFGVETNEQLMLQIEKSLEEKTEFKGEIMFYKKNGSPFWCLLDIVPIKNEKGDVVLFLASFKDITDTKVKITPEDKKEDKVKGRSRAGTHFDSARRRSRAVLYHISGHLQRREKNKLKINNNVFVDKPAFPEYKVSDAKKSKFILLHFSTFKAGWDWLILLATFYVAVTVPYNVCFIGNDDLSTTRSTTVSDIAVEILFIIDIILNFRTTYVSKSGQVIFEARSICIHYVTTWFIIDLIAALPFDLLYAFNVTVVSLVHLLKTVRLLRLLRLLQKLDRYSQHSTIVLTLLMSMFALLAHWMACIWYVIGKMEREDNSLLKWEVGWLHELGKRLESPYYGNNTLGGPSIRSAYIAALYFTLSSLTSVGFGNVSANTDAEKIFSICTMLIGALMHALVFGNVTAIIQRMYSRWSLYHTRTKDLKDFIRVHHLPQQLKQRMLEYFQTTWSVNNGIDSNELLKDFPDELRSDITMHLNKEILQLSLFECASRGCLRSLSLHIKTSFCAPGEYLLRQGDALQAIYFVCSGSMEVLKDSMVLAILGKGDLIGANLSIKDQVIKTNADVKALTYCDLQCIILKGLFEVLDLYPEYAHKFVEDIQHDLTYNLREGHESDVISRLSNKSMVSQSEPKGNGNINKRLPSIVEDEEEEEEGEEEEAVSLSPICTRGSSSRNKKVGSNKAYLGLSLKQLASGTVPFHSPIRVSRSNSPKTKQEIDPPNHNKRKEKNLKLQLSTLNNAGPPDLSPRIVDGIEDGNSSEESQTFDFGSERIRSEPRISPPLGDPEIGAAVLFIKAEETKQQINKLNSEVTTLTQEVSQLGKDMRNVIQLLENVLSPQQPSRFCSLHSTSVCPSRESLQTRTSWSAHQPCLHLQTGGAAYTQAQLCSSNITSDIWSVDPSSVGSSPQRTGAHEQNPADSELYHSPSLDYSPSHYQVVQEGHLQFLRCISPHSDSTLTPLQSISATLSSSVCSSSETSLHLVLPSRSEEGSFSQGTVSSFSLENLPGSWNQEGMASASTKPLENLPLEVVTSTAEVKDNKAINV

Annotated regions:
phrase: LFECASRGCLRSLSLHIKTSFCAPGEYLLRQGDALQAIYFVCSGSMEVLKDSMVLAILGKGDLIGANLSIKDQVIKTNADVKALTYCDLQCIILKGLFEVLDLYPEYAHKFVEDI
type: DOMAIN
name: cNMP-bd_dom
description: Cyclic nucleotide-binding domain

phrase: LFECASRGCLRSLSLHIKTSFCAPGEYLLRQGDALQAIYFVCSGSMEVLKDSMVLAILGKGDLIGANLSIKDQVIKTNADVKALTYCDLQCIILKGLFEVLDLYPEYAHKFVEDIQH
type: DOMAIN
name: cNMP-bd_dom
description: Cyclic nucleotide-binding domain

phrase: APGEYLLRQGDALQAIYFVCSGSMEVLKDSMVLAILGKGDLIGANLSIKDQVIKTNADVKALTYCDLQCIILKGLFE
type: DOMAIN
name: cNMP-bd_dom
description: Cyclic nucleotide-binding domain

phrase: PIVYCSDGFCELAGFARTEVMQKSCSCKFLFGVETNEQLMLQIEKSLEEKTEFKGEIMFYKKNGSPFWCLLDIVPIKNEKGDVVLFLASFKDITDT
type: DOMAIN
name: PAS
description: PAS domain

phrase: IVYCSDGFCELAGFARTEVMQKSCSCKFLFGVETNEQLMLQIEKSLEEKTEFKGEIMFYKKNGSPFWCLLDIVPIKNEKGDVVLFLASFKD
type: DOMAIN
name: PAS
description: PAS domain

phrase: FKGEIMFYKKNGSPFWCLLDIVPIKNEKGDVVLFLASFKDITDTKVKITPED
type: DOMAIN
name: PAS-assoc_C
description: PAS-associated, C-terminal

phrase: WDWLILLATFYVAVTVPYNVCFIGNDDLSTTRSTTVSDIAVEILFIIDIILNFRTTYVSKSGQVIFEARSICIHYVTTWFIIDLIAALPFDLLYAFNVTVVSLVHLLKTVRLLRLLRLLQKLDRYSQHSTIVLTLLMSMFALLAHWMACIWYVIGKMEREDNSLLKWEVGWLHELGKRLESPYYGNNTLGGPSIRSAYIAALYFTLSSLTSVGFGNVSANTDAEKIFSICTMLIGALMHALVFGNVTAIIQRMYSR
type: DOMAIN
name: Ion_trans_dom
description: Ion transport domain

phrase: KGEIMFYKKNGSPFWCLLDIVPIKNEKGDVVLFLASFKDITD
type: REPEAT
name: PAC
description: PAC motif

phrase: GFPIVYCSDGFCELAGFARTEVMQKSCSCKFLFGVETNEQLMLQIEKSLEEKTEFKGEIMFYKKNGSPFWCLLDIVPIKNEKGDVVLFLASFKDIT
type: DOMAIN
name: PAS
description: PAS domain

phrase: LFECASRGCLRSLSLHIKTSFCAPGEYLLRQGDALQAIYFVCSGSMEVLKDSMVLAILGKGDLIGANLSIKDQVIKTNADVKALTYCDLQCIILKGLFEVLDLYPEYAHKF
type: DOMAIN
name: cNMP-bd_dom
description: Cyclic nucleotide-binding domain
Protein sequence:
MNIQALLSDKVSQALIAAGAPADCEAQVRQSAKAQFGDYQANGVMAVAKKLGMQPRQLAERVVELLDLTGIASKIEIAGPGFINIFLDRQWVAEKVEYALTAPKLGVTPVEPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAFLGHNVIRANHVGDWGTQFGMLIAYLEKMQNENASDMGLSDLELFYQQAKKTYDEDEEFALRARAYVVKLQSGDEYCRQMWRKLVDITMAQNQVAYDRLNVTLTKDDVMGESLYNAMLPEIVADLKAKGLAVESEGATVVYLDEYKNKDGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRILYYIDSRQHQHLMQAWTIVRKAGYVPESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSDLLDEAVERAGKLIAEKNPDMPADELKQVINAVGIGAVKYADLSKSRTTDYIFDWDNMLALDGNTAPYMQYAYTRVVSVFRRAGVDESSLTLPLVITEDREAALATRLLQFEEIITTVAREGTPHVMCSYLYDLAGLFSSFYEHCQILNAESEEIRQSRLKLAMLTAKTLKQGLDTLGIQTVERM

Annotated regions:
phrase: MQYAYTRVVSVFRRAGVDESSLTLPLVITEDREAALATRLLQFEEIITTVAREGTPHVMCSYLYDLAGLFSSFYEHCQILNAESEEIRQSRLKLAMLTAKTLKQGLDTLGIQTVER
type: DOMAIN
name: DALR_anticod-bd
description: DALR anticodon binding

phrase: PNVAKQMHVGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: MQYAYTRVVSVFRRAGVDESSLTLPLVITEDREAALATRLLQFEEIITTVAREGTPHVMCSYLYDLAGLFSSFYEHCQILNAESEEIRQSRLKLAMLTAKTLKQGLDTLGIQTVER
type: DOMAIN
name: DALR_anticod-bd
description: DALR anticodon binding

phrase: TIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAFLGHNVIRANHVGDWGTQFGMLIAYLEKMQNENASDMGLSDLELFYQQAKKTYDEDEEFALRARAYVVKLQSGDEYCRQMWRKLVDITMAQNQVAYDRLNVTLTKDDVMGESLYNAMLPEIVADLKAKGLAVESEGATVVYLDEYKNKDGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRILYYIDSRQHQHLMQAWTIVRKAGYVPESVPLEHHMFGMMLGKDGKPFKTRS
type: DOMAIN
name: ArgRS_core
description: Arginyl-tRNA synthetase, catalytic core domain

phrase: LSDKVSQALIAAGAPADCEAQVRQSAKAQFGDYQANGVMAVAKKLGMQPRQLAERVVELLDLTGIASKIEIAGPGFINIF
type: DOMAIN
name: Arg-tRNA-synth_N
description: Arginyl tRNA synthetase N-terminal domain

phrase: KLGVTPVEPQTIVVDYSAPNVAKQMHVGHLRSTIIGDAAVRTLAFLGHNVIRANHVGDWGTQFGMLIAYLEKMQNENASDMGLSDLELFYQQAKKTYDEDEEFALRARAYVVKLQSGDEYCRQMWRKLVDITMAQNQVAYDRLNVTLTKDDVMGESLYNAMLPEIVADLKAKGLAVESEGATVVYLDEYKNKDGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRILYYIDSRQHQHLMQAWTIVRKAGYVPESVPLEHHMFGMMLGKDGKPFKTRSGGTVKLSDLLDEAVERAGKLIAEKNPDMPADELKQVINAVGIGAVKYADLSKSRTTDYIFD
type: DOMAIN
name: ArgRS_core
description: Arginyl-tRNA synthetase, catalytic core domain

phrase: MNIQALLSDKVSQALIAAGAPADCEAQVRQSAKAQFGDYQANGVMAVAKKLGMQPRQLAERVVELLDLTGIASKIEIAGPGFINIF
type: DOMAIN
name: Arg-tRNA-synth_N
description: Arginyl tRNA synthetase N-terminal domain
Protein sequence:
MSEAPLILLAAGGTGGHLFPAEALGVVLMKRGLRVRLVTDSRAMRYSGLFSADMIDVVPSETVRGRTPWALARTGVMLGAGTALAIGLMMRLRPAAVIGFGGYPTLPPLFAARALRIPTLIHDANAVMGRANRLLSRRVSAIATSLPGVLDRDPELAAKTTTTGTPMRPAILAAAAVPFAPLDAEEPLRLLVVGGSQGARVMADIVPGALDELDPALLRRLALTQQVRDEDMSRVRAVYDRLKIACELAPFFSDLPARLAASQLVVSRSGAGTVAELGAIGRPSILVPLPGALDQDQFANAGVLADAGGAIRIVQGDFTSERLAAEITALAADPQKLTAMATAARTVGRLDAADRLADLVMQVARI

Annotated regions:
phrase: ILLAAGGTGGHLFPAEALGVVLMKRGLRVRLVTDSRAMRYSGLFSADMIDVVPSETVRGRTPWALARTGVMLGAGTALAIGLMMRLRPAAVIGFGGYPTLPPLFAARALRIPTLIHDANAVMGRANRLLSRRVSAI
type: DOMAIN
name: GlycoTrans_28_N
description: Glycosyltransferase family 28, N-terminal domain

phrase: LLVVGGSQGARVMADIVPGALDELDPALLRRLALTQQVRDEDMSRVRAVYDRLKIACELAPFFSDLPARLAASQLVVSRSGAGTVAELGAIGRPSILVPLPGALDQDQFANAGVLADAGGAIRIVQGDFTSERLAAEITALAADPQKLTAMATAARTVGRLDAADR
type: DOMAIN
name: Glyco_trans_28_C
description: Glycosyl transferase, family 28, C-terminal
Protein sequence:
MTNTQTEIINELKVSPAIDVAKEVEFRVQFLVDYLRASHAKGFVLGISGGQDSTLAGRLAQLAVERIRAEENSTDYVFYAVRLPYAIQADEDDAQVALEFIAPDKSVTVNVKDATDATEATVAAALELPELTDFNRGNIKARQRMVAQYAIAGQYGLLVIGTDHAAENVTGFFTKFGDGAADLLPLAGLSKRQGAAILEHLGAPSSTWTKIPTADLEEDRPALPDEEALGVSYADIDNYLENKPDVSEGAQQRIEHLWKVGQHKRHLPVTPQEDWWR

Annotated regions:
phrase: EFRVQFLVDYLRASHAKGFVLGISGGQDSTLAGRLAQLAVERIRAEENSTDYVFYAVRLPYAIQADEDDAQVALEFIAPDKSVTVNVKDATDATEATVAAALELPELTDFNRGNIKARQRMVAQYAIAGQYGLLVIGTDHAAENVTGFFTKFGDGAADLLPLAGLSKRQGAAILEHLGAPSSTWTKIPTADLEEDRPALPDEEALGVSYADIDNYLENKPDVSEGAQQRIEHLWKVGQHKRHL
type: DOMAIN
name: NAD/GMP_synthase
description: NAD/GMP synthase
Protein sequence:
MAEASRWHRGGASKHKLHYRKEVEITTTLQELLLYFIFLINLCILTFGMVNPHMYYLNKVMSSLFLDTSVPGEERTNFKSIRSITDFWKFMEGPLLEGLYWDSWYNNQQLYNLKNSSRIYYENILLGVPRVRQLKVRNNTCKVYSSFQSLMSECYGKYTSANEDLSNFGLQINTEWRYSTSNTNSPWHWGFLGVYRNGGYIFTLSKSKSETKNKFIDLRLNSWITRGTRVIFIDFSLYNANVNLFCIIRLVAEFPATGGILTSWQFYSVKLLRYVSYYDYFIASCEITFCIFLFVFTTQEVKKIKEFKSAYFKSIWNWLELLLLLLCFVAVSFNTYYNVQIFLLLGQLLKSTEKYSDFYFLACWHIYYNNIIAITIFFAWIKIFKFISFNKTMSQLSSTLSRCVKDIVGFAIMFFIIFFAYAQLGFLVFGSQVDDFSTFQNSIFAQFRIVLGDFNFAGIQQANPILGPIYFITFIFFVFFVLLNMFLAIINDTYSEVKADYSIGRRLDFELGKMIKQSYKNVLEKFRLKKAQKDEDKKTKGSGDLAEQARREGFDENEIQNAEQMKKWKERLEKKYYSMEIQDDYQPVTQEEFRELFLYAVELEKELHYINLKLNQVVRKVSAL

Annotated regions:
phrase: RYVSYYDYFIASCEITFCIFLFVFTTQEVKKIKEFKSAYFKSIWNWLELLLLLLCFVAVSFNTYYNVQIFLLLGQLLKSTEKYSDFYFLACWHIYYNNIIAITIFFAWIKIFKFISFNKTMSQLSSTLSRCVKDIVGFAIMFFIIFFAYAQLGFLVFGSQVDDFSTFQNSIFAQFRIVLGDFNFAGIQQANPILGPIYFITFIFFVFFVLLNMFLAIINDTYSE
type: DOMAIN
name: PKD1_2_channel
description: Polycystin cation channel, PKD1/PKD2

phrase: NFKSIRSITDFWKFMEGPLLEGLYWDSWYNNQQLYNLKNSSRIYYENILLGVPRVRQLKVRNNTCKVYSSFQSLMSECYGKYTSANEDLSNFGLQINTEWRYSTSNTNSPWHWGFLGVYRNGGYIFTLSKSKSETKNKFIDLRLNSWITRGTRVIFIDFSLYNANVNLFCIIRLVAEFPATGGILTSWQFYSVKL
type: DOMAIN
name: Polycystin_dom
description: Polycystin domain
Protein sequence:
MAEQGAGGDGHRGGDGATHSDPASDGYKVQEKRTAPSRPTSTVSGQTSNHSGNKPDPPPVLRVDDRQRLARERREEREKQLAARETVWLEREERARQHYERHLEARKKKLEDQRLKEERRRAAVEEKRRQRLEEDKERHEAVVRRTMERSQKPRQKSNRWSWGSPLHGSSSIHSGDPDRRSVSTMNLSKHVDPVISKRLSSSSATLLNSPDRARRLQLSPWESSVVSRLLTPTHSFLARSKSTAALSGDTASCSPIIMPFKAAHSRNPVDRPKLFVTPPEGSARRRTIHGLASHKREREREHVPFHVSPGARRTLSPSNLKARSPAPARLWLPSKSMPHLPGTPRPASSLPPGSVRAASAQAPSSSPGNIRPFKREVKVEPEKKDPLPAVKSRVPLVKVEEVTVEEGTPVKPPEPAAPASAPIATPAPAPATDPAPVPAPSSTVTVGVVPKTSAGTTDPEEATRLLAEKRRLAREQREKEERERKEKEELERQKIEELARRVAEERSRREEEARRLEEEQAREKEELALRLAEEERERWEREEVERVQKQKEEEARAREEAERARQEREKHFQKEEQERLERKKRLEEIMRRTRRTETADKKTTEQRNGDIAKGVLTGEPEVPALPCMASSGNGESAESPHGVALQQSEVTTESSPDLEKQPNENGMSIQNENFEEVINLPVGSKASRLDVTNENPEIPLKPILAFNDEGTLGPLPQVDGVQTQQTAEVI

Annotated regions:
Protein sequence:
MAKYIFVTGGVVSSLGKGISASSIAKLLQARGLKVTMVKCDPYINVDPGTMNPYQHGEVFVTEDGAEADLDLGHYERFLNIDMHRTNNFTAGQVYETVISKERRGEFLGNTVQVIPHITDEIKRRFRYPSKGVDVVLIEIGGTVGDIESLPFLEAARQHALEVGKENVLFVHVTLIPYIRASEELKTKPTQHSVGKLREIGLNPDILICRSEKPLTPEIRAKIAMFTSVHKEAVIEAPDVGTIYEVPVVFKKQGVDEQVLMLLRQRASTKNFDGWTKLVERIKNPSEEVTIALAGKYTELKDAYKSVHEALLHGGLAHNARVKIEYVDTGAPDLDAKLAEADGVLVPGGFGDRGIDGKLAAIRIARESEIPYFGLCLGMQIAVIEFARNVLKLEGANSTEFDKETRYPVIDLLPEQKGIEDKGATMRLGSYACELKKGSLAAACYKATKIDERHRHRYEFNNKFRKLIEDSGLLVTGRFVEKDLAEIVELKDHPWFLASQFHPEFKSRPEAPHPLFASFIAAAIKRARGSGRSRSEAYARG

Annotated regions:
phrase: VTIALAGKYTELKDAYKSVHEALLHGGLAHNARVKIEYVDTGAPDLDAKLAEADGVLVPGGFGDRGIDGKLAAIRIARESEIPYFGLCLGMQIAVIEFARNVLKLEGANSTEFDKETRYPVIDLLPEQKGIEDKGATMRLGSYACELKKGSLAAACYKATKIDERHRHRYEFNNKFRKLIEDSGLLVTGRFVEKDLAEIVELKDHPWFLASQFHPEFKSRPEAPHPLFASF
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain

phrase: LKDAYKSVHEALLHGGLAHNARVKIEYVDTGAPDLDAKLAEADGVLVPGGFGDRGIDGKLAAIRIARESEIPYFGLCLGMQIAVIEFARNVLKLEGANSTEFDKETRYPVIDLLPEQKGIEDKGATMRLGSYACELKKGSLAAACYKATKIDERHRHRYEFNNKFRKLIEDSGLLVTGRFVEKDLAEIVELKDHPWFLASQFHPEFKSRPEAPHPLFASFI
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: KYIFVTGGVVSSLGKGISASSIAKLLQARGLKVTMVKCDPYINVDPGTMNPYQHGEVFVTEDGAEADLDLGHYERFLNIDMHRTNNFTAGQVYETVISKERRGEFLGNTVQVIPHITDEIKRRFRYPSKGVDVVLIEIGGTVGDIESLPFLEAARQHALEVGKENVLFVHVTLIPYIRASEELKTKPTQHSVGKLREIGLNPDILICRSEKPLTPEIRAKIAMFTSVHKEAVIEAPDVGTIYEVPVVFKKQGVDEQV
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: KYIFVTGGVVSSLGKGISASSIAKLLQARGLKVTMVKCDPYINVDPGTMNPYQHGEVFVTEDGAEADLDLGHYERFLNIDMHRTNNFTAGQVYETVISKERRGEFLGNTVQVIPHITDEIKRRFRYPSKGVDVVLIEIGGTVGDIESLPFLEAARQHALEVGKENVLFVHVTLIPYIRASEELKTKPTQHSVGKLREIGLNPDILICRSEKPLTPEIRAKIAMFTSVHKEAVIEAPDVGTIYEVPVVFKKQGVDEQVLML
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal
Protein sequence:
MAAAIASSLIRQKRQARESNSDRVSASKRRSSPSKDGRSLCERHVLGVFSKVRFCSGRKRPVRRRPEPQLKGIVTRLFSQQGYFLQMHPDGTIDGTKDENSDYTLFNLIPVGLRVVAIQGVKASLYVAMNGEGYLYSSDVFTPECKFKESVFENYYVIYSSTLYRQQESGRAWFLGLNKEGQIMKGNRVKKTKPSSHFVPKPIEVCMYREPSLHEIGEKQGRSRKSSGTPTMNGGKVVNQDST

Annotated regions:
Protein sequence:
MSLNRSEKEAVINEVTSLAAKAQTLVIAEYRGITVADMTKLRVDARSKGVSLSVLKNTLARRAVAGSQFDVVADQMTGPLIYGFSEDAVAAAKVVADFAKTNDKLVIRGGAFAGKALDVNGVKQLANIPSKEVLLAQLCGLLMSPISRTAVVLGALAAKKGEGEAAAA

Annotated regions:
phrase: KEAVINEVTSLAAKAQTLVIAEYRGITVADMTKL
type: CONSERVED_SITE
name: Ribosomal_uL10_CS_bac
description: Large ribosomal subunit protein uL10, conserved site, bacteria
Protein sequence:
MSLPGLELSQTSSEREFVPAPPTQITLSKGSEWRFEVAFGTAIRVKLLAGTAELFGTELAASQTYTFSGTKAAIYTWHGCTLEVSAGDTISTIDGLGSGGLNGEGARGYGAGGCQSEYTAEETPMVEYANVHFALEAMRQEAKATGKDGPRVLILGPENAGKTSVAKILTAYATKVGRQPIVVNLDPAEGMLSVPGTLTATAFRTMMNVEEGWGSSPMSGPSAVPVKLPLVYFYPLQNPLEAEGAVYRPIVSRLALSVTGRMAEDEDTRETGIIVDTPGILSAGKPGSLEIINHIVTEFASSERLYSTMMKNYDNKPTSSASAAASDERITVVKLSKSGGCVDRDAAFMKSVRESQIRTYFFGNPIPSTASAALSMSASSTTNITLSPHAQQLDFDSLAVYNYTIASSDEDEDEYDPSQFGASDTFLPGGRNDAEGPETKHAEETSFTSSVPGLGGSSGDDAASGSSAVPLKKVLPPAPNTLANSLLAVTHTAPNASPAEIRDASIMGFLYVADVDSEKGKIRVLAPIGGRVPPRAIVWGKKWPGEVVGLVG

Annotated regions:
phrase: LSPHAQQLDFDSLAVYNYTIASSDEDEDEYDPSQFGASDTFLPGGRNDAEGPETKHAEETSFTSSVPGLGGSSGDDAASGSSAVPLKKVLPPAPNTLANSLLAVTHTAPNASPAEIRDASIMGFLYVADVDSEKGKIRVLAPIGGRVPPRAIVWGKKW
type: DOMAIN
name: Clp1_C
description: Pre-mRNA cleavage complex subunit Clp1, C-terminal

phrase: TLSKGSEWRFEVAFGTAIRVKLLAGTAELFGTELAASQTYTFSGTKAAIYTWHGCTLEVSAGDTISTIDGLGSGGLNGEGARGYGAGGCQSEYTAEETPMVEYANVHFALEAMRQE
type: DOMAIN
name: Clp1_N
description: Clp1, N-terminal beta-sandwich domain

phrase: GPENAGKTSVAKILTAYATKVGRQPIVVNLDPAEGMLSVPGTLTATAFRTMMNVEEGWGSSPMSGPSAVPVKLPLVYFYPLQNPLEAEGAVYRPIVSRLALSVTGRMAEDEDTRETGIIVDTPGILSAGKPGSLEIINHIVTEFASSERLYSTMMKNYDNKPTSSASAAASDERITVVKLSKSGGCVDRDAAFMKSVRESQIRTYF
type: DOMAIN
name: CLP1_P
description: Polyribonucleotide 5'-hydroxyl-kinase Clp1, P-loop domain
Protein sequence:
MLSPIVLSHVTPRSLVPLCFGAVRVKPGGSLTARFSSEMAAFRKAFSEAKHIAIITGAGVSAESGIPTYRGAAGQWRKWKAQDLATPEAFSRNPSRVWEFYHYRREMTLIREPNAAHHAIAECEARLSRQGRSVVVITQNIDGLHQRATSKHVLELHGSLFRTRCVSCGKVSANHRSPICDSLKGKGSPDPDVADANIPVINLPRCEDNNCNGLLRPDVIWFGETLDSNVLTPVEKELEICDLCLVVGTSSIVYPAAMFGPQVASRGIPVAEFNIKSTPNTSYFTYHIQGPCGTTLPAALARHNSEVI

Annotated regions:
phrase: TARFSSEMAAFRKAFSEAKHIAIITGAGVSAESGIPTYRGAAGQWRKWKAQDLATPEAFSRNPSRVWEFYHYRREMTLIREPNAAHHAIAECEARLSRQGRSVVVITQNIDGLHQRATSKHVLELHGSLFRTRCVSCGKVSANHRSPICDSLKGKGSPDPDVADANIPVINLPRCEDNNCNGLLRPDVIWFGETLDSNVLTPVEKELEICDLCLVVGTSSIVYPAAMFGPQVASRGIPVAEFNIKSTPNTSYFTYHIQGPCGTTLPAALARHNS
type: DOMAIN
name: Ssirtuin_cat_dom
description: Sirtuin family, catalytic core domain
Protein sequence:
MKVYLCAISNISSGVCAEDCKFCTQSTKYRADIPRYKYKSIETIVEEAKKAKAAKAIGFCLVTAGKGIDDKILDFVTQAARAVKKEVPDISLIGCNGTAEVWQLKELKHAGIDNYNHNLETAKSFYEQICSTHSWEERYQTCLNAKEAGLNLCTGGIFGLGESKEQREEMMDQIASLEPMSVPINFYHPNEALPLPQTTIDPSDALSIIQDMRKRVPNAMIMVAGGRELVFGEQWPKILDAGANAIVIGDYLTTKGERPDKDIQTLQKLGVEIATSCHE

Annotated regions:
phrase: PINFYHPNEALPLPQTTIDPSDALSIIQDMRKRVPNAMIMVAGGRELVFGEQWPKILDAGANAIVIGDYLTTKGERPDKDIQTLQKLGVE
type: DOMAIN
name: BATS_dom
description: Biotin and thiamin synthesis-associated domain

phrase: CAISNISSGVCAEDCKFCTQSTKYRADIPRYKYKSIETIVEEAKKAKAAKAIGFCLVTAGKGIDDKILDFVTQAARAVKKEVPDISLIGCNGTAEVWQLKELKHAGIDNYNHNLETAKSFYEQICSTHSWEERYQTCLNAKEAGLNLCTGGIFGLGESKEQREEMMDQIASLEPMSVPINFYHPNEALPLPQTTIDPSDALSIIQDMR
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: SSGVCAEDCKFCTQSTKYRADIPRYKYKSIETIVEEAKKAKAAKAIGFCLVTAGKGIDDKILDFVTQAARAVKKEVPDISLIGCNGTAEVWQLKELKHAGIDNYNHNLETAKSFYEQICSTHSWEERYQTCLNAKEAGLNLCTGGIFGLGESKEQREEMMD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: MKVYLCAISNISSGVCAEDCKFCTQSTKYRADIPRYKYKSIETIVEEAKKAKAAKAIGFCLVTAGKGIDDKILDFVTQAARAVKKEVPDISLIGCNGTAEVWQLKELKHAGIDNYNHNLETAKSFYEQICSTHSWEERYQTCLNAKEAGLNLCTGGIFGLGESKEQREEMMDQIASLEPMSVPINFYHPNEALPLPQTTIDPSDALSIIQDMRKRVPNAMIMVAGG
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: PINFYHPNEALPLPQTTIDPSDALSIIQDMRKRVPNAMIMVAGGRELVFGEQWPKILDAGANAIVIGDYLTTKGERPDKDIQTLQKLGV
type: DOMAIN
name: BATS_dom
description: Biotin and thiamin synthesis-associated domain

phrase: KVYLCAISNISSGVCAEDCKFCTQSTKYRADIPRYKYKSIETIVEEAKKAKAAKAIGFCLVTAGKGIDDKILDFVTQAARAVKKEVPDISLIGCNGTAEVWQLKELKHAGIDNYNHNLETAKSFYEQICSTHSWEERYQTCLNAKEAGLNLCTGGIFGLGESKEQREEMMDQIASLEPMSVPINFYHPNEALPLPQTTIDPSDALSIIQDMRKRVPNAMIMVAGGRELVFGEQWPKILDAGANAIVIGDYLTTKGERPDKDIQTLQKLGVEIATS
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MIGKLNGKIDSHCDDYVIIDVNGVGYLVYASGKTLAKLVEGKFYKLFIETHVREEHIHLYGFLTLEEKNFFNLLQSVNGIGTKMALSILSNLTPTDIQIAINNDDRNIFKAISGVGAKLAERIMLELKDKITKIFSSSAIIKDSNISSIAINEVMKALVNLGFTRFEAQNTVQGIITQNPKISIDELIKTALKNRNSSF

Annotated regions:
phrase: AINEVMKALVNLGFTRFEAQNTVQGIITQNPKISIDELIKTAL
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal

phrase: MIGKLNGKIDSHCDDYVIIDVNGVGYLVYASGKTLAKLVEGKFYKLFIETHVREEHIHLY
type: DOMAIN
name: DNA_helicase_Holl-junc_RuvA_I
description: DNA helicase, Holliday junction RuvA type, domain I, bacterial

phrase: NIFKAISGVGAKLAERIML
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: NLLQSVNGIGTKMALSILS
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: INEVMKALVNLGFTRFEAQNTVQGIITQNPKISIDELIKTAL
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal
Protein sequence:
MSFKSIFLTGGVVSSLGKGLTAASLALLLERQGLKVAMLKLDPYLNVDPGTMNPYEHGEVYVTDDGVETDLDLGHYHRFSSVQLSKHSTATSGQIYTRVITKERNGEFLGSTVQVIPHVTNEIINVIQACAEHHKPDVLIIEIGGTIGDIESLPFLEAVRQFRCEHPQDCLSIHMTYVPYLKSAKEIKTKPTQHSVQNLRSIGISPDVILCRSEVSLSSEVKRKISLFCNVPENAVFNAIDLENSIYEMPLLLARENIVDFLLSKFGFSPKSLDLTDWQNLVTTLCDGNRHLVRIGLVGKYLEHKDAYKSVFESLSHASIPANCSLEIVPISPESEALTNQLSQCDGCLIPGGFGTRSWEGKIAAARYCRDNNIPCFGICLGMQALVVEYARYALSLPLANSLEMDPNTPDPVVCMMQGQDTMIKGGTMRLGAYPCQITPKSLAFEAYKTDLVQERHRHRYEVNPAYVDLLQKNGLRIVGVCPQGDLCEIIEIPNHRWMLGVQFHPEFLSKLAAPHPLFVKFLSAALDYSLEKGRE

Annotated regions:
phrase: KDAYKSVFESLSHASIPANCSLEIVPISPESEALTNQLSQCDGCLIPGGFGTRSWEGKIAAARYCRDNNIPCFGICLGMQALVVEYARYALSLPLANSLEMDPNTPDPVVCMMQGQDTMIKGGTMRLGAYPCQITPKSLAFEAYKTDLVQERHRHRYEVNPAYVDLLQKNGLRIVGVCPQGDLCEIIEIPNHRWMLGVQFHPEFLSKLAAPHPLFVKF
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: KSIFLTGGVVSSLGKGLTAASLALLLERQGLKVAMLKLDPYLNVDPGTMNPYEHGEVYVTDDGVETDLDLGHYHRFSSVQLSKHSTATSGQIYTRVITKERNGEFLGSTVQVIPHVTNEIINVIQACAEHHKPDVLIIEIGGTIGDIESLPFLEAVRQFRCEHPQDCLSIHMTYVPYLKSAKEIKTKPTQHSVQNLRSIGISPDVILCRSEVSLSSEVKRKISLFCNVPENAVFNAIDLENSIYEMPLLLARENIVDFLLSK
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: KSIFLTGGVVSSLGKGLTAASLALLLERQGLKVAMLKLDPYLNVDPGTMNPYEHGEVYVTDDGVETDLDLGHYHRFSSVQLSKHSTATSGQIYTRVITKERNGEFLGSTVQVIPHVTNEIINVIQACAEHHKPDVLIIEIGGTIGDIESLPFLEAVRQFRCEHPQDCLSIHMTYVPYLKSAKEIKTKPTQHSVQNLRSIGISPDVILCRSEVSLSSEVKRKISLFCNVPENAVFNAIDLENSIYEMPLLLARENIVDFLL
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: VRIGLVGKYLEHKDAYKSVFESLSHASIPANCSLEIVPISPESEALTNQLSQCDGCLIPGGFGTRSWEGKIAAARYCRDNNIPCFGICLGMQALVVEYARYALSLPLANSLEMDPNTPDPVVCMMQGQDTMIKGGTMRLGAYPCQITPKSLAFEAYKTDLVQERHRHRYEVNPAYVDLLQKNGLRIVGVCPQGDLCEIIEIPNHRWMLGVQFHPEFLSKLAAPHPLFVKF
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain
Protein sequence:
MTDPYSDEHALALDTADPLRAFRDEFHVPVHGDGEQLYFCGNSLGLQPRAVRGALIDELDDWARLGVEGHFLGKHPWMPYHAFVRDSLAACVGAMPSEVVAMNSLSVNLHLLMVSFYRPTAERPAILIEAGAFPSDRYAVEAQIRFHGFDPSTCLIELEADEQTGTISLAAIERVLAEHSSRIALILWPGVQYRTGQAFDLKEIARLGHARGCVVGFDLAHAAGNLPLQLHDSGADFAAWCSYKYLNSGPGAVAGAFVHERHAHSDRPRFAGWWGHDQATRFRMGPDFVPTPGADGWQLSNPPILALAPLRVSLEIFQRAGMTALRAKSEKITAYLETLIRARVADTLQIVTPSEPERRGAQLSLRVAGGRERGRALFEHLVALGIVGDWREPDVIRISPAPLYNRYRDVLGFVRAVEAWRNP

Annotated regions:
Protein sequence:
MERIVVTLGERSYPITIASGLFNEPASFLPLKSGEQVMLVTNETLAPLYLDKVRGVLEQAGVNVDSVILPDGEQYKSLAVLDTVFTALLQKPHGRDTTLVALGGGVVGDLTGFAAASYQRGVRFIQVPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQPASVVVDLDCLKTLPPRELASGLAEVIKYGIILDGAFFNWLEENLDALLRLDGPAMAYCIRRCCELKAEVVAADERETGLRALLNLGHTFGHAIEAEMGYGNWLHGEAVAAGMVMAARTSERLGQFSSAETQRIITLLTRAGLPVNGPREMSAQAYLPHMLRDKKVLAGEIRLILPLAIGKSEVRSGVSHELVLNAIADCQSA

Annotated regions:
phrase: VILPDGEQYKSLAVLDTVFTALLQKPHGRDTTLVALGGGVVGDLTGFAAASYQRGVRFIQVPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQPASVVVDLDCLKTLPPREL
type: DOMAIN
name: DHQS/DOIS_N
description: 3-dehydroquinate synthase, N-terminal domain

phrase: GLAEVIKYGIILDGAFFNWLEENLDALLRLDGPAMAYCIRRCCELKAEVVAADERETGLRALLNLGHTFGHAIEAEMGYGNWLHGEAVAAGMVMAARTSERLGQFSSAETQRIITLLTRAGLPVNGPREMSAQAYLPHMLRDKK
type: DOMAIN
name: DHQS_C
description: 3-dehydroquinate synthase, C-terminal domain
Protein sequence:
MTAPFTAETGDAHIDDVVGVEVTIDGMLVIADKLGLTDFPPSMGIRLNIPQPDLRKVVWEQVERDLSAQGVLDVYGNPHPEVAAMVDTLARADRTLECRWWRRDAGGKMIRFVVCRKGGRHVVAARDNDLLVLQRVAPQIGLAGMVMTVLGEGSPANVEPLTGVADRLAQCRTAEELTGYGIPPTSARAYASIISEPDGWVEIVANERHPGGTTSQVDVAAGVLDAKQGRIVSIPRRVNGELYGSFLSGTKDNLERALEGLVEFLPSKTWFDKTDADNAYQH

Annotated regions:
Protein sequence:
MPICPLGKVIVFPPVSLAMEDGLLAVGGDLSPYRLLEAYRQGIFPWYSPGEPILWWAPQPRFVLFPDEILLSRSMRQILRKKHFQVTLDRNFDAVIHACATIGRPAQEGTWITEEMQEAYSILHELGYAHSVEVWRDRGLIGGLYGVSLGGCFFGESMFSRESNASKAALIFLSSLLKILRFTLIDCQVYTSHLALLGARFIPRETFTALIRKSLRRPTLRGNWSTHPETADKLPGHEF

Annotated regions:
Protein sequence:
MSRFFSSNYEYDVASSSSEEDLLSSSEEDLLSSSSSESELDQESDDSFFNESESESEADVDSDDSDAKPYGPDWFKKSEFRKQGGGSNKFLKSSNYDSSDEESDEEDGKKVVKSAKEKLLDEMQDVYNKISQAENSDDWLTISNEFDLISRLLVRAQQQNWGTPNIFIKVVAQVEDAVNNTQQADLKNKAVARAYNTTKQRVKKVSRENEDSMAKFRNDPESFDKEPTADLDISANGFTISSSQGNDQAVQEDFFTRLQTIIDSRGKKTVNQQSLISTLEELLTVAEKPYEFIMAYLTLIPSRFDASANLSYQPIDQWKSSFNDISKLLSILDQTIDTYQVNEFADPIDFIEDEPKEDSDGVKRILGSIFSFVERLDDEFMKSLLNIDPHSSDYLIRLRDEQSIYNLILRTQLYFEATLKDEHDLERALTRPFVKRLDHIYYKSENLIKIMETAAWNIIPAQFKSKFTSKDQLDSADYVDNLIDGLSTILSKQNNIAVQKRAILYNIYYTALNKDFQTAKDMLLTSQVQTNINQFDSSLQILFNRVVVQLGLSAFKLCLIEECHQILNDLLSSSHLREILGQQSLHRISLNSSNNASADERARQCLPYHQHINLDLIDVVFLTCSLLIEIPRMTAFYSGIKVKRIPYSPKSIRRSLEHYDKLSFQGPPETLRDYVLFAAKSMQKGNWRDSVKYLREIKSWALLPNMETVLNSLTERVQVESLKTYFFSFKRFYSSFSVAKLAELFDLPENKVVEVLQSVIAELEIPAK

Annotated regions:
phrase: SWALLPNMETVLNSLTERVQVESLKTYFFSFKRFYSSFSVAKLAELFDLPENKVVEVLQSVIAELEIPA
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain

phrase: YHQHINLDLIDVVFLTCSLLIEIPRMTAFYSGIKVKRIPYSPKSIRRSLEHYDKLSFQGPPETLRDYVLFAAKSMQKGNWRDSVKYLREIKSWALLPNMETVLNSLTERVQVESLKTYFFSFKRFYSSFSVAKLAELFDLPENKVVEVLQSVIAELEIPA
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain

phrase: SQGNDQAVQEDFFTRLQTIIDSRGKKTVNQQSLISTLEELLTVAEKPYEFIMAYLTLIPSRFDASANLSYQPIDQWKSSFNDISKLLSILDQTIDTYQVNEFADPIDFIEDEPKEDSDGVKRILGSIFSFVERLDDEFMKSLLNIDPHSSDYLIRLRDEQSIYNLILRTQLYFEATLKDEHDLERALTRPFVKRLDHIYYKSENLIKIMETAAWNIIPAQFKSKFTSKDQLDSADYVDNLIDGLSTILSKQNNIAVQKRAILYNIYYTALNKDFQTAKDMLLTSQVQTNINQFDSSLQILFNRVVVQLGLSAFKLCLIEECHQILNDLLSSSHLREILGQQSLHRISLNSSNNASADERARQCLPYHQHINLDLIDVVFLTCSLLIEIPRMTAFYS
type: DOMAIN
name: EIF3C_N_dom
description: Eukaryotic translation initiation factor 3 subunit C, N-terminal domain
Protein sequence:
MTNSNLRTENHFDYVKISIASPQRIMDWGQRTLPNGQVVGEVTKPETINYRTLKPEMDGLFCEKIFGPSKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGYIKLAAPVSHVWYLKGIPSYVAILLDIPLRDVEQIVYFNCYVVLDPGDHKELKYKQLLTEDEWLEIEDEIYAEDSTIENEPFVGIGAEALKQLLEDLDLNQIAEELREEITQSKGQKRAKLIKRIRVIDNFIATNAKPEWMVLDAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRALKSLSDIIEGKQGRFRQNLLGKRVDYSGRSVIVVGPKLKMHQCGLPKEMAIELFQPFVIHRLIRQNIVNNIKAAKKLIQKADDEVMQVLQEVIEGHPILLNRAPTLHRLGIQAFEPKLVGGRAIQLHPLVCPAFNADFDGDQMAVHVPLALESQTEARMLMLASNNILSPATGEPIVTPSQDMVLGSYYLTALQPNYQKPDFGDNKSTFASLEDVIFAFEDKRLSLHEWVWVRFNGEVEDEDEMSKPQKIEELEDGSRLEMWKLRRDRFDSQNNLISRFVLTTVGRVVMNYTIIDSVSKT

Annotated regions:
phrase: NILSPATGEPIVTPSQDMVLGSYYLTALQPNYQKPDFGDNKSTFASLEDVIFAFEDKRLSL
type: DOMAIN
name: RNA_pol_Rpb1_3
description: RNA polymerase Rpb1, domain 3

phrase: EWMVLDAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRALKSLSDIIEGKQGRFRQNLLGKRVDYSGRSVIVVGPKLKMHQCGLPKEMAIELFQPFVIHRLIRQNIVNNIKAAKKLIQKADDEVMQVLQEVIEGHPILLNRAPTLHRLGIQAFEPKLVGGRAIQLHPLVCPAFNADFDGDQMAVHVPLALESQTEARMLMLASNNILSPATGEPIVTPSQDMVLGSYYL
type: DOMAIN
name: RNA_pol_N
description: RNA polymerase, N-terminal

phrase: GKRVDYSGRSVIVVGPKLKMHQCGLPKEMAIELFQPFVIHRLIRQNIVNNIKAAKKLIQKADDEVMQVLQEVIEGHPILLNRAPTLHRLGIQAFEPKLVGGRAIQLHPLVCPAFNADFDGDQMAVHVPLALESQTEARMLM
type: DOMAIN
name: RNA_pol_asu
description: RNA polymerase, alpha subunit

phrase: HFDYVKISIASPQRIMDWGQRTLPNGQVVGEVTKPETINYRTLKPEMDGLFCEKIFGPSKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGYIKLAAPVSHVWYLKGIPSYVAILLDIPLRDVEQIVYFNCYVVLDPGDHKELKYKQLLTEDEWLEIEDEIYAEDSTIENEPFVGIGAEALKQLLEDLDLNQIAEELREEITQSKGQKRAKLIKRIRVIDNFIATNAKPEWMVLDAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRALKSLSDIIEGKQGRFRQN
type: DOMAIN
name: RNA_pol_Rpb1_1
description: RNA polymerase Rpb1, domain 1
Protein sequence:
MTQPVTVEVRTDPPYPVIIGTGLLDDLARVLDGRHKVAILHQPTLTQTAEVIRNHLADKGIDAHRIEIPDAEGGKELPVVGFIWEVLGRIGLGRKDAIVSLGGGAATDVAGFAAATWLRGVDIVHVPTTLLGMVDAAVGGKTGINTDAGKNLVGAFHQPAAVLIDLATLESLPRNEIVAGMAEIVKAGFIADPVILDMIEADPQAALDPTGQVLPELIRRAVVVKAEVVAADEKESQLREILNYGHTLAHAIERRERYQWRHGAAVSVGLVFAAELGRLAGRLDDATAERHRAILISLGLPVTYDADALPQLMEAMLGDKKTRAGVLRFVVLDGLGKPGRLEGPDPSLLAAAYAEVARS

Annotated regions:
phrase: IEIPDAEGGKELPVVGFIWEVLGRIGLGRKDAIVSLGGGAATDVAGFAAATWLRGVDIVHVPTTLLGMVDAAVGGKTGINTDAGKNLVGAFHQPAAVLIDLATLESLPRNE
type: DOMAIN
name: DHQS/DOIS_N
description: 3-dehydroquinate synthase, N-terminal domain

phrase: GMAEIVKAGFIADPVILDMIEADPQAALDPTGQVLPELIRRAVVVKAEVVAADEKESQLREILNYGHTLAHAIERRERYQWRHGAAVSVGLVFAAELGRLAGRLDDATAERHRAILISLGLPVTYDADALPQLMEAMLGDKK
type: DOMAIN
name: DHQS_C
description: 3-dehydroquinate synthase, C-terminal domain