nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MVREEVAGSTQTLQWKCVESRVDSKRLYYGRFILSPLRKGQADTVGIALRRALLGETEGTCITHAKFGSVPHEYSTIAGIEESVQEILLNLKEIVLRSNLYGVRTASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTEPTDFRIELRIKRDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNAKYEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHTEEEGTRFQENKNRFTSPLLSFQKRLTNLKKNKKRIPLNCIFIDQLELPSRTYNCLKRANIHTLLDLLSKTEEDLMRIDSFRMQDGKQIWDTLEKHLPMDLPKNKF

Annotated regions:
phrase: PLRKGQADTVGIALRRALLGETEGTCITHAKFGSVPHEYSTIAGIEESVQEILLNLKEIVLRSNLYGVRTASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTEPTDFRIELRIKRDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNAKYEILFLEIWTNGSLTPKEALYEASRNLIDL
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: YGRFILSPLRKGQADTVGIALRRALLGETEGTCITHAKFGSVPHEYSTIAGIEESVQEILLNLKEIVLRSNLYGVRTASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTEPTDFRIELRIKRDRGYHTEVRKNTQDGSYPIDAVSMPVRNVNYSIFACGNGNAKYEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLH
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: GSVPHEYSTIAGIEESVQEILLNLKEIVLRSNLYGVRTASICVKGPRYITAQDIILPPSVEIVDTAQPIANLTEPTDFRIELRIKRDRGYHTEVRKNTQDGSYPIDA
type: DOMAIN
name: DNA-dir_RNA_pol_insert
description: DNA-directed RNA polymerase, insert domain

phrase: IPLNCIFIDQLELPSRTYNCLKRANIHTLLDLLSKTEEDLMRIDSFRMQDGKQIWDTL
type: DOMAIN
name: RNAP_asu_C
description: RNA polymerase, alpha subunit, C-terminal
Protein sequence:
MEYSRKTYLDLNIMAKYILILSLFFGPGLSWDVFYSGDEDQLSLARERRAANYNPSPHMSTWERNEIQQEILNILGLQHRPRPPSLRGGQNQFCAQFTEWSYYRTLNIDEQSGHPSETEPQPGGLASNAIYNSPDSSGIGSVMSGTVFNYTRNEVQAVSQADTIMSLPVHYKDAAIEDTEHRYRFDIGRIPQGETVTSAELRVFRDAGRQGRSLYRIDVLLLRERGSDGSRSPVYLDSTIVGAGDHGWLVFDMTSATSTWRSYPGANVGLQLRVESLQGLNIDPTDAGVVGVGNNEGREPFMVVFFQRNEEVIATNSHLRRNRRAATRQKKGGKRPRKPDTDNDIASRDSASSLNSDWQCKRKNLFVNFEDLDWQEWIIAPLGYVAFYCQGECAFPLNGHANATNHAIVQTLVHHMSPSHVPQPCCAPTKLSPITVLYYDDSRNVVLKKYKNMVVRACGCL

Annotated regions:
phrase: KRPRKPDTDNDIASRDSASSLNSDWQCKRKNLFVNFEDLDWQEWIIAPLGYVAFYCQGECAFPLNGHANATNHAIVQTLVHHMSPSHVPQPCCAPTKLSPITVLYYDDSRNVVLKKYKNMVVRACGC
type: DOMAIN
name: TGF-b_C
description: Transforming growth factor-beta, C-terminal

phrase: IIAPLGYVAFYCQGE
type: CONSERVED_SITE
name: TGFb_CS
description: Transforming growth factor beta, conserved site

phrase: QCKRKNLFVNFEDLDWQEWIIAPLGYVAFYCQGECAFPLNGHANATNHAIVQTLVHHMSPSHVPQPCCAPTKLSPITVLYYDDSRNVVLKKYKNMVVRACG
type: DOMAIN
name: TGF-b_C
description: Transforming growth factor-beta, C-terminal

phrase: CKRKNLFVNFEDLDWQEWIIAPLGYVAFYCQGECAFPLNGHANATNHAIVQTLVHHMSPSHVPQPCCAPTKLSPITVLYYDDSRNVVLKKYKNMVVRACGC
type: DOMAIN
name: TGF-b_C
description: Transforming growth factor-beta, C-terminal

phrase: HMSTWERNEIQQEILNILGLQHRPRPPSLRGGQNQFCAQFTEWSYYRTLNIDEQSGHPSETEPQPGGLASNAIYNSPDSSGIGSVMSGTVFNYTRNEVQAVSQADTIMSLPVHYKDAAIEDTEHRYRFDIGRIPQGETVTSAELRVFRDAGRQGRSLYRIDVLLLRERGSDGSRSPVYLDSTIVGAGDHGWLVFDMTSATSTWRSYPGANVGLQLRVESLQGLNIDPTDAGVVGVGNNEGREPFMVV
type: DOMAIN
name: TGF-b_propeptide
description: TGF-beta, propeptide
Protein sequence:
MGARGAPSRRRQAGRRPRYLPTGSFPFLLLLLLLCIQLGGGQKKKENLLAEKVEQLMEWSSRRSVFRMNGDKFRKFIKAPPRNYSMIVMFTALQPQRQCSVCRLANEEYQILANSWRYSSAFCNKLFFSKVDYDEGTDIFQQLNINSAPTFMHFPPKGRPKRADTFDLQRIGFGAEQLAKWIADRTDVHIRVFRPPNYSGTIALALLVSLVGGLLYLRRNNLEFIYNKTGWAMVSLCIVFAMTSGQMWNHIRGPPYAHKNPHNGQVSYIHGSSQVQFVAESHIILVLNAAITMGMDLLNEAATSKGDVGKRRIICLVGLGLVVFFFSFLLSIFRSKYHGYPYSFLIK

Annotated regions:
Protein sequence:
MADSTGLQFTVKVGALPESTFVVAEFALDEGLNRPFNLRLELASRQPDIDFGAVLDQPCELLVWYNGELQRRVCGVVSDMAQGDSGFRRTRYQLLVLPALWRLSLRQNSRIFQAQKPDEILSILLQEHGITDYAFALKNEHAKREYCVQYRETDLDFVNRLAAEEGMFYFHEFEAGKHRIVFADDAAALTQGPELFFNLGNRSLEQGPYVRQFHYREAVRPSDVELKDYSFKTPAYGLSHKKQGADLDHQRDTYQHFDFPGRYKQGGSGKAFAQHRLDALRNDAVAGSGKSNCAALQPGQTFSLTEHPNGGLNTDWQVVRIQHTGLQPQALEEEGGSGPTVYHNEFGVVKASSTWRARIGSPEALHKPMVDGPQIAMVVGPEGEEIYCDEHGRVKLQFPWDRYGSSNDQSSCWVRVSQGWAGGQYGMMAIPRIGHEVIVSFLEGDPDQPIVTGRTYHATNRPPYELPANKARTVLRTETHQGEGFNELRFEDQAGQEEIYIHGQKDLNVLIENNAVWHIKHDEHRDIDNERVTRIKANDHLTVEGEKRDQIKADYSLTVDASLHQKLGQSLLVEAGQEVHIKVGDKLVLEAGSEITLKGGGSFVKVDPSGIKLMGPAIKLNAGGSAGSGSGWGGKAPVVPKGVEVVKAPELVELVKAIPTEKAMEALLKEQGPAQTFFVPSR

Annotated regions:
phrase: EHGRVKLQFPWDRYGSSNDQSSCWVRVSQGWAGGQYGMMAIPRIGHEVIVSFLEGDPDQPIVTGRT
type: DOMAIN
name: Gp5/Vgr_OB
description: Gp5/Type VI secretion system Vgr protein, OB-fold domain

phrase: VLRTETHQGEGFNELRFEDQAGQEEIYIHGQKDLNVLIENNAVWHIKHDEHRDIDNERVTRIKANDHLTVEGEKRDQIKADYSLTVDASLHQKLGQSLLVEAGQEVHI
type: DOMAIN
name: Gp5_Vgr_C
description: Gp5/Type VI secretion system Vgr, C-terminal trimerisation domain
Protein sequence:
MPEQAVKQSHDIDALMMTIGAQAKAASRPLSIAGTDQKNRALLAMASAIEASKEAILAANRKDLAAAESAGLAASFVDRLTLNDARIAGIAEGIRSVAALADPVGEVIAAWDRPNGLKIERVRTPLGVIGVIYESRPNVTADAGALCLKAGNAVILRGGSDSQHSSRAIHACLVQGLRIAGLPENAIQLVPVTDRAAVGALLSGLKGTVDVIVPRGGKSLVARVQSEARVPVFAHLEGICHIYVDKSADLDMAKAIVVNAKMRRTGICGAAETLLVDASAVSSHLEPVVKALLDAGCEVRGSQPVRNVVEGLEAATEEDWRTEYLDAIISVAVVDGISGAIEHIGTYSSNHTEAVIAEDPDVVARFFNELDSAILLHNASTQFADGGEFGMGAEIGIATGKMHARGPVGVEQLTSFKYRVHGTGQTRT

Annotated regions:
phrase: TIGAQAKAASRPLSIAGTDQKNRALLAMASAIEASKEAILAANRKDLAAAESAGLAASFVDRLTLNDARIAGIAEGIRSVAALADPVGEVIAAWDRPNGLKIERVRTPLGVIGVIYESRPNVTADAGALCLKAGNAVILRGGSDSQHSSRAIHACLVQGLRIAGLPENAIQLVPVTDRAAVGALLSGLKGTVDVIVPRGGKSLVARVQSEARVPVFAHLEGICHIYVDKSADLDMAKAIVVNAKMRRTGICGAAETLLVDASAVSSHLEPVVKALLDAGCEVRGSQPVRNVVEGLEAATEEDWRTEYLDAIISVAVVDGISGAIEHIGTYSSNHTEAVIAEDPDVVARFFNELDSAILLHNASTQFADGGEFGMGAEIGIATGKMHARGPVGVEQLTSFKYRVHG
type: DOMAIN
name: GPR_dom
description: GPR domain

phrase: AKAASRPLSIAGTDQKNRALLAMASAIEASKEAILAANRKDLAAAESAGLAASFVDRLTLNDARIAGIAEGIRSVAALADPVGEVIAAWDRPNGLKIERVRTPLGVIGVIYESRPNVTADAGALCLKAGNAVILRGGSDSQHSSRAIHACLVQGLRIAGLPENAIQLVPVTDRAAVGALLSGLKGTVDVIVPRGGKSLVARVQSEARVPVFAHLEGICHIYVDKSADLDMAKAIVVNAKMRRTGICGAAETLLVDASAVSSHLEPVVKALLDAGCEVRGSQPVRNVVEGLEAATEEDWRTEYLDAIISVAVVDGISGAIEHIGTYSSNHTEAVIAEDPDVVARFFNELDSAILLHNASTQFADGGEFGMGAEIGIATGKMHARGPVGVEQLTSF
type: DOMAIN
name: GPR_dom
description: GPR domain

phrase: VDGISGAIEHIGTYSSNHTEAV
type: CONSERVED_SITE
name: G-glutamylP_reductase_CS
description: Gamma-glutamyl phosphate reductase GPR, conserved site

phrase: LMMTIGAQAKAASRPLSIAGTDQKNRALLAMASAIEASKEAILAANRKDLAAAESAGLAASFVDRLTLNDARIAGIAEGIRSVAALADPVGEVIAAWDRPNGLKIERVRTPLGVIGVIYESRPNVTADAGALCLKAGNAVILRGGSDSQHSSRAIHACLVQGLRIAGLPENAIQLVPVTDRAAVGALLSGLKGTVDVIVPRGGKSLVARVQSEARVPVFAHLEGICHIYVDKSADLDMAKAIVVNAKMRRTGICGAAETLLVDASAVSSHLEPVVKALLDAGCEVRGSQPVRNVVEGLEAATEEDWRTEYLDAIISVAVVDGISGAIEHIGTYSSNHTEAVIAEDPDVVARFFNELDSAILLHNASTQFADGGEFGMGAEIGIATGKMHARGPVGVEQLTSFKYRVHGTGQT
type: DOMAIN
name: GPR_dom
description: GPR domain

phrase: AQAKAASRPLSIAGTDQKNRALLAMASAIEASKEAILAANRKDLAAAESAGLAASFVDRLTLNDARIAGIAEGIRSVAALADPVGEVIAAWDRPNGLKIERVRTPLGVIGVIYESRPNVTADAGALCLKAGNAVILRGGSDSQHSSRAIHACLVQGLRIAGLPENAIQLVPVTDRAAVGALLSGLKGTVDVIVPRGGKSLVARVQSEARVPVFAHLEGICHIYVDKSADLDMAKAIVVNAKMRRTGICGAAETLLVDASAVSSHLEPVVKA
type: DOMAIN
name: Aldehyde_DH_dom
description: Aldehyde dehydrogenase domain
Protein sequence:
MDVDSEEKRHRTRSKGVRVPVEPAIQELFSCPTPGCDGSGHVSGKYARHRSVYGCPLAKKRKTQDKQPQEPAPKRKPFAVKADSSSVDECYESDGTEDMDDKEEDDDEEFSEDNDEQGDDDDEDEVDREDEEEIEEEDDEEDDDDEDGDDVEEEEEDDDEEEEEEEEEEENEDHQMSCTRIMQDTDKDDNNNDEYDNYDELVAKSLLNLGKIAEDAAYRARTESEMNSNTSNSLEDDSDKNENLGRKSELSLDLDSDVVRETVDSLKLLAQGHGVVLSENISDRSYAEGMSQQDSRNMNYVMLGKPMNNGLMEKMVEESDEEVCLSSLECLRNQCFDLARKLSETNPQDRSQPPNMSVRQHVRQEDDFPGRTPDRSYSDMMNLMRLEEQLSPRSRTFSSCAKEDGCHERDDDTTSVNSDRSEEVFDMTKGNLTLLEKAIALETERAKAMREKMAMDAGRRDNLRSYEDQSPRQLAGEDRKSKSSDSHVKKPYYGKDPSRTEKRESKCPTPGCDGTGHVTGLYPHHRSLSGCPHKDRVPPEILAMHENVLKCPTPGCTGRGHVNSNRNSHRSLSGCPIAAAEKLAKAQEKHQSCDVSKSNQASDRVLRPMCFVKQLEIPQYGYRNNVPTTTPRSNLAKELEKYSKTSFEYNSYDNHTYGKRAIAPKVQTRDISPKGYDDAKRYCKNASPSSSTTSSYAPSSSSNLSCGGGSSASSTCSKSSFDYTHDMEAAHMAATAILNLSTRCREMPQNLSTKPQDLCTARNPDMEVDENGTLDLSMNKQRPRDSCCPVLTPLEPMSPQQQAVMSSRCFQLSEGDCWDLPVDYTKMKPRRVDEDEPKEITPEDLDPFQEALEERRYPGEVTIPSPKPKYPQCKESKKDLITLSGCPLADKSIRSMLATSSQELKCPTPGCDGSGHITGNYASHRSLSGCPRAKKSGIRIAQSKEDKEDQEPIRCPVPGCDGQGHITGKYASHRSASGCPLAAKRQKDGYLNGSQFSWKSVKTEGMSCPTPGCDGSGHVSGSFLTHRSLSGCPRATSAMKKAKLSGEQMLTIKQRASNGIENDEEIKQLDEEIKELNESNSQMEADMIKLRTQITTMESNLKTIEEENKVIEQQNESLLHELANLSQSLIHSLANIQLPHMDPINEQNFDAYVTTLTEMYTNQDRYQSPENKALLENIKQAVRGIQV

Annotated regions:
phrase: YRNNVPTTTPRSNLAKELEKYSKTSFEYNSYDNHTYGKRAIAPKVQTRDISPKGYDDAKRYCKNASPSSSTTSSYAPSSSSNLSCGGGSSASSTCSKSSFDYTHDMEAAHMAATAILNLSTRCREMPQNLSTKPQDLCTARNPDMEVDENGTLDLSMNKQRPRDSCCPVLTPLEPMSPQQQAVMSSRCFQLSEGDCWDLPVDYTKMKPRRVDEDEPKEITPEDLDPFQEALEERRYPGEVTIPSPKPKYPQ
type: DOMAIN
name: Myelin_TF
description: Myelin transcription factor 1

phrase: DKEDQEPIRCPVPGCDGQGHITGKYASHRSASGCPLAAKRQKD
type: REPEAT
name: Znf_C2H2C
description: Zinc finger, C2H2C-type

phrase: EPAIQELFSCPTPGCDGSGHVSGKYARHRSVYGCPLAKKRKTQ
type: REPEAT
name: Znf_C2H2C
description: Zinc finger, C2H2C-type

phrase: SRTEKRESKCPTPGCDGTGHVTGLYPHHRSLSGCPHKDRVPPE
type: REPEAT
name: Znf_C2H2C
description: Zinc finger, C2H2C-type

phrase: KSVKTEGMSCPTPGCDGSGHVSGSFLTHRSLSGCPRATSAMKK
type: REPEAT
name: Znf_C2H2C
description: Zinc finger, C2H2C-type

phrase: KCPTPGCTGRGHVNSNRNSHRSLSGCPI
type: REPEAT
name: Znf_C2H2C
description: Zinc finger, C2H2C-type

phrase: CPTPGCDGSGHVSGSFLTHRSLSGCPR
type: REPEAT
name: Znf_C2H2C
description: Zinc finger, C2H2C-type

phrase: KCPTPGCDGTGHVTGLYPHHRSLSGC
type: REPEAT
name: Znf_C2H2C
description: Zinc finger, C2H2C-type

phrase: KCPTPGCDGSGHITGNYASHRSLSGCPR
type: REPEAT
name: Znf_C2H2C
description: Zinc finger, C2H2C-type

phrase: CPTPGCDGSGHVSGKYARHRSVYGCPL
type: REPEAT
name: Znf_C2H2C
description: Zinc finger, C2H2C-type

phrase: RCPVPGCDGQGHITGKYASHRSASGCPL
type: REPEAT
name: Znf_C2H2C
description: Zinc finger, C2H2C-type

phrase: LATSSQELKCPTPGCDGSGHITGNYASHRSLSGCPRAKKSGIR
type: REPEAT
name: Znf_C2H2C
description: Zinc finger, C2H2C-type

phrase: LAMHENVLKCPTPGCTGRGHVNSNRNSHRSLSGCPIAAAEKLA
type: REPEAT
name: Znf_C2H2C
description: Zinc finger, C2H2C-type
Protein sequence:
MTEKIGLFTGTFDPLTNGHLDVIKRASQHFDQLYVGIFKNDQKNPLFPTDKRVEMLEEALTSLSVTHKVKVIKHERDLTVNIAKKLGVTALVRSLRNSQDLEYEKNMFYFNMEMTGIETIFFLAKPELEPLNSTRMRELHAFGQDVSAWVPENVSRELRKLDEKK

Annotated regions:
phrase: IGLFTGTFDPLTNGHLDVIKRASQHFDQLYVGIFKNDQKNPLFPTDKRVEMLEEALT
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: LFTGTFDPLTNGHLDVIKRASQHFDQLYVGIFKNDQKNPLFPTDKRVEMLEEALTSLSVTHKVKVIKHERDLTVNIAKKLGVTALVRSLRNSQDLEYEKNMFYFNMEMTGIETIFFLAKPELEPLNSTRMR
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain
Protein sequence:
MMETMPNWLKQRAFLTPDRTAIEIEEEKVTFMQLHEKVVSVCEHLTHVGVKRGQKVAVLMKNGMEMITVIHALSYVGAVAVLLNTRLSREELLWQMDDAEVICLVTDQDFEAKDIPVYSFAEVMNGPKEEASIQEEFSLREAMTIIYTSGTTGKPKGVILTYGNHWASAVGSSLNLGLRDDDCWLACMPMFHVGGLSLLMKNIMYGMRILLVPKYDADFIHKALQTRGVTIISVVSKMLTDLLERLGEGTYPSSLRCMLLGGGPAPKPLLETCVDKGIPVYQTYGMTETSSQICTLSADYMLTKVGSAGKPLFQCQLRIEKDGVVVPPFAEGEIVVKGPNVTGGYFNREDATRETIQNGWLHTGDLGYLDEEGFLYVLDRRSDLIISGGENIYPAQIEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVVKSGEVTEEEILHFCEEKLAKYKVPKKACFLEELPRNASKKLLRRELRQLVEEM

Annotated regions:
phrase: QIEEVLLSHPMVAEAGVVGMTDDKWGQVPAAFVVKSGEVTEEEILHFCEEKLAKYKVPKKACFLEELPRNASK
type: DOMAIN
name: AMP-bd_C
description: AMP-binding enzyme, C-terminal domain

phrase: QRAFLTPDRTAIEIEEEKVTFMQLHEKVVSVCEHLTHVGVKRGQKVAVLMKNGMEMITVIHALSYVGAVAVLLNTRLSREELLWQMDDAEVICLVTDQDFEAKDIPVYSFAEVMNGPKEEASIQEEFSLREAMTIIYTSGTTGKPKGVILTYGNHWASAVGSSLNLGLRDDDCWLACMPMFHVGGLSLLMKNIMYGMRILLVPKYDADFIHKALQTRGVTIISVVSKMLTDLLERLGEGTYPSSLRCMLLGGGPAPKPLLETCVDKGIPVYQTYGMTETSSQICTLSADYMLTKVGSAGKPLFQCQLRIEKDGVVVPPFAEGEIVVKGPNVTGGY
type: DOMAIN
name: AMP-dep_synth/lig_dom
description: AMP-dependent synthetase/ligase domain

phrase: IIYTSGTTGKP
type: CONSERVED_SITE
name: AMP-binding_CS
description: AMP-binding, conserved site
Protein sequence:
MRQTNRGMGGTPGTPGAPGQPPSQRRRIWWIFAALLLTNYFIMRLLSPLGDDAVTIPYTEFKQQVASGNVGAIYSQGQKIEGEFLRPVTVSALQGETSTARQGASPPAVTARHFTTLLPDFVDPGFEAFLIEHKVEIRAVPIQEANPWLTMLFGFGPALLIIGFYVWLYRRAARHTGGLGAMGGMFNMGKSRARRYDRDSAERVTFDDVAGIDEAENELVEIVDFLKNPEKYTRLGGSAPKGVLLVGAPGTGKTLLAKAVAGEANVPFFSMSGSEFVEMIVGVGAARVRDLFRQAREHAPSIVFIDEIDSIGRARGQVVLSGASEQEQTLNQILTEMDGFSGKEGVIVLAATNQPDILDKALLRAGRFDRRIVLNLPDKVGRKAILEVHTRKVPLAPDVDLMDVAAATPGLSGAELRTLVNEAALLAARQNQDTVTYANFMDALEKLMLGPERSIVLSPADRERIAYHESGHAILALLLPGADPVHRVSIVPRGQALGVTYQRPTADRYNFPEPYLRARIIGMLGGRAAEEIVYGTRTTGAENDIEQATELARNMVTRWGMSDALGMVQLAPRHNPFLGVSQGMGPSISEHTAATIDAEVQRIIQESHEEAKRLLRAHRKQLDALVAALLERDTLDEQEILEVTGLPPAQPLKNLPNAPKLPDSNP

Annotated regions:
phrase: APKGVLLVGAPGTGKTLLAKAVAGEANVPFFSMSGSEFVEMIVGVGAARVRDLFRQAREHAPSIVFIDEIDSIGRARGQVVLSGASEQEQTLNQILTEMDGFSGKEGVIVLAATNQPDILDKALLRAGRFDRRIVLNLP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VIVLAATNQPDILDKALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: DVDLMDVAAATPGLSGAELRTLVNEAALLAARQNQDTVTYANF
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: VLSPADRERIAYHESGHAILALLLPGADPVHRVSIVPRGQALGVTYQRPTADRYNFPEPYLRARIIGMLGGRAAEEIVYGTRTTGAENDIEQATELARNMVTRWGMSDALGMVQLAPRHNPFLGVSQGMGPSISEHTAATIDAEVQRIIQESHEEAKRLLRAHRKQLDALVAALLERDTLDEQEIL
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: VLLVGAPGTGKTLLAKAVAGEANVPFFSMSGSEFVEMIVGVGAARVRDLFRQAREHAPSIVFIDEIDSIGRARGQVVLSGASEQEQTLNQILTEMDGFSGKEGVIVLAATNQPDILDKALLRAGRFDRRIVL
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core
Protein sequence:
MFDKLQAIKEKHEDLEQQLLDPHAAEDQNRFRKLNKEYRDLCSIVEAYDRYALAKKQLEESRLLLKNEKEQDMRAMVQDEISSLQESILEREKQLKLLLLPKDEVDSRNVIIEIRAGTGGEEAALFAADLVRMYQRFAEQQGWKYEVLDFNESSVPGGFREIVLGVSGHDVYGTMKYESGVHRVQRVPDTETQGRIHTSAASVAVLPEAEEVDVEIRKDDLRFDTYRSGGKGGQNVNKVETAVRITHQPSGIVVACQEERSQLQNKERAMKMLRAKLYDRQLAEQQEKRAGLRRSMVTTGDRSAKIRTYNYPQSRVTDHRIGFTSHALPQIMQGDIKDIIEALKMHDQAERLQAELV

Annotated regions:
phrase: LLLKNEKEQDMRAMVQDEISSLQESILEREKQLKLLLLPKDEVDSRNVIIEIRAGTGGEEAALFAADLVRMYQRFAEQQGWKYEVLDFNESSVPGGFREIVLGVSGHDVYGTMKY
type: DOMAIN
name: PCRF
description: Peptide chain release factor

phrase: IKEKHEDLEQQLLDPHAAEDQNRFRKLNKEYRDLCSIVEAYDRYALAKKQLEESRLLLKNEKEQDMRAMVQDEISSLQESILEREKQLKLLLLPKDEVDSRNVIIEIRAGTGGEEAALFAADLVRMYQRFAEQQGWKYEVLDFNESSVPGGFREIVLGVSGHDVYGTMKYESGVHRVQRVPDTETQGRIHTSAAS
type: DOMAIN
name: PCRF
description: Peptide chain release factor

phrase: EEVDVEIRKDDLRFDTYRSGGKGGQNVNKVETAVRITHQPSGIVVACQEERSQLQNKERAMKMLRAKLYDRQLAEQQEKRAGLRRSMVTTGDRSAKIRTYNYPQSRVTDH
type: DOMAIN
name: Pep_chain_release_fac_I
description: Peptide chain release factor class I

phrase: RSGGKGGQNVNKVETA
type: DOMAIN
name: Pep_chain_release_fac_I
description: Peptide chain release factor class I
Protein sequence:
MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGASVRQDVLGDLMSRNFIDAIIKEKINPAGAPTYVPGEYKLGEDFTYSVEFEVYPEVELQGLEAIEVEKPIVEVTDADVDGMLDTLRKQQATWKEKDGAVEAEDRVTIDFTGSVDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAAKFAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMERELKSAIRNRVKSQAIEGLVKANDIDVPAALIDSEIDVLRRQAAQRFGGNEKQALELPRELFEEQAKRRVVVGLLLGEVIRTNELKADEERVKGLIEEMASAYEDPKEVIEFYSKNKELMDNMRNVALEEQAAEAVLAKAKVTEKETTFNELMNQQA

Annotated regions:
phrase: VEAEDRVTIDFTGSVDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAAKFAIN
type: DOMAIN
name: PPIase_FKBP_dom
description: FKBP-type peptidyl-prolyl cis-trans isomerase domain

phrase: MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGFRKGKVPMNIVAQRYGASVRQDVLGDLMSRNFIDAIIKEKINPAGAPTYVPGEYKLGEDFTYSVEFEVYPEVELQGLEAIEVEKPIVEVTDADVDGMLDT
type: DOMAIN
name: Trigger_fac_ribosome-bd_bac
description: Trigger factor, ribosome-binding, bacterial

phrase: SVEGLRAEVRKNMERELKSAIRNRVKSQAIEGLVKANDIDVPAALIDSEIDVLRRQAAQRFGGNEKQALELPRELFEEQAKRRVVVGLLLGEVIRTNELKADEERVKGLIEEMASAYEDPKEVIEFYSKNKELMDNMRNVALEEQAAEAV
type: DOMAIN
name: Trigger_fac_C
description: Trigger factor, C-terminal

phrase: EDRVTIDFTGSVDGEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENLKGKAAKFAINLKKVEERELPEL
type: DOMAIN
name: PPIase_FKBP_dom
description: FKBP-type peptidyl-prolyl cis-trans isomerase domain
Protein sequence:
MTVQTFTPNQTTTLETAKKTIAEQSQNSQTTGNKIGFVSLGCPKNLVDSERILTQLRTEGYEIVNSYHDSDVVIVNTCGFIDSAVQESLDTIGEALKENGKVIVTGCLGAREDEIRQVHPNVLGITGPHAYQNVLEHVHQYAPKPAHNPFTSLVPDHGVKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGEIIGEAERLKNAGVKELLVISQDTSAYGVDTKHSLGFANGSPVRHNIKALSEELGKMGIWVRLHYVYPYPHVDEIIPLMAEGKVLPYLDIPFQHASPRVLKMMKRPGQAERTLERIKKWREICPELVIRSTFIVGFPGETEEDFQILLDWLKEAQLDRVGCFKYSPVEGAAANEIEDQIPEDVKQDRFERFMLVQQEISAAKLQKRIGSTMQVLIDEVDEEGAIGRTYADAPEIDGLVYLNGETNLKPGELVNVVIEHADEYDLWGSILHDAQ

Annotated regions:
phrase: NKIGFVSLGCPKNLVDSERILTQLRTEGYEIVNSYHDSDVVIVNTCGFIDSAVQESLDTIGEALKENGKVIVTGCLGAREDEIRQVHPNVLGITGPHAYQNVLEHVHQYA
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: QKRIGSTMQVLIDEVDEEGAIGRTYADAPEIDGLVYLNGETNLKPGELVNVVIEHADEYDLWGSIL
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: LKISEGCNHRCTFCIIPSMR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: KISEGCNHRCTFCIIPSMRGDLVSRPVGEIIGEAERLKNAGVKELLVISQDTSAYGVDTKHSLGFANGSPVRHNIKALSEELGKMGIWVRLHYVYPYPHVDEIIPLMAEGKVLPYLDIPFQHASPRVLKMMKRPGQAERTLERIKKWREICPELVIRSTFIVGFPGETEEDFQILLDW
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: KIGFVSLGCPKNLVDSERILTQLRTEGYEIVNSYHDSDVVIVNTCGFIDSAVQESLDTIGEALKENGKVIVTGCLGAREDEIRQVHP
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: IGSTMQVLIDEVDEEGAIGRTYADAPEIDGLVYLNGETNLKPGELVNVVIEHADEYDLWGS
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: HYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGEIIGEAERLKNAGVKELLVISQDTSAYGVDTKHSLGFANGSPVRHNIKALSEELGKMGIWVRLHYVYPYPHVDEIIPLMAEGKVLPYLDIPFQHASPRVLKMMKRPGQAERTLERIKKWREICPELVIRSTFIVGFPGETEEDFQILLDWLKEAQLDRVGCFKYSPVEGAAANEIEDQIPEDVKQDRFERFM
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: TTGNKIGFVSLGCPKNLVDSERILTQLRTEGYEIVNSYHDSDVVIVNTCGFIDSAVQESLDTIGEALKENGKVIVTGCLGAREDEIRQVHPNVLGITGPHAYQNVLEHVHQYAPKPAHNPFTSLVPDHGVKLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGEIIGEAERLKNAGVKELLVISQDTSAYGVDTKHSLGFANGSPVRHNIKALSEELGKMGIWVRLHYVYPYPHVDEIIPLMAEGKVLPYLDIPFQHASPRVLKMMKRPGQAERTLERIKKWREICPELVIRSTFIVGFPGETEEDFQILLDWLKEAQLDRVGCFKYSPVEGAAANEIEDQIPEDVKQDRFERFMLVQQEISAAKLQKRIGSTMQVLIDEVDEEGAIGRTYADAPEIDGLVYLNGETNLKPGELVNVVIEHADEYDLWGSIL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGEIIGEAERLKNAGVKELLVISQDTSAYGVDTKHSLGFANGSPVRHNIKALSEELGKMGIWVRLHYVYPYPHVDEIIPLMAEGKVLPYLDIPFQHASPRVLKMMKRPGQAERTLERIKKWREICPELVIRSTFIVGFPGETEEDFQILLDWLKEAQLDRVGCFKYSPVEGAAANEIEDQIPEDVKQDRFERFMLVQQEISA
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MSLLTPDSGLLFWMVIVFGIVFVILAKYGFPVITRMVDERKQYIDKSLLAAREANEQLANIKADSEMILAKAHEEQARILNEAVATRERILKEAKTQAQVEGQKLLDEAKKQIQAEKDSAISDIRRQVAVLSVDIAEKVLRKNLDDEKEQMEMIDRLLDELTVSKD

Annotated regions:
Protein sequence:
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKADLRFQSSAVAALQEASESYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA

Annotated regions:
phrase: TARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKADLRFQSSAVAALQEASESYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRI
type: DOMAIN
name: Histone_H2A/H2B/H3
description: Histone H2A/H2B/H3
Protein sequence:
MGKNVVILGTQWGDEGKGKVVDLLTEDVAAVVRFQGGHNAGHTLVIDGKKTVLHLIPSGILREGVQCIIGNGVVLSPAALKAEVLELLEQGVPAVDRLKISAACPLILPYHIAIDQARELARGEKKIGTTGRGIGPAYEDKVARRAIRVGDLLDSERFASKLKEVLEYYNFVLTQYHKVEPISFDEVYTAGLEMAEFLRPMVADTITLLHDLRKAGANIMFEGAQGSLLDVDHGTYPYVTSSNTTAGGAPAGTGFGPLYLDYVLGITKAYTTRVGSGPFPTELFDEDGERLGRRGHEFGATTGRSRRCGWFDSVALRHAVQINSVSGICLTKLDVLDGSSVIKVCVSYADENGNPVAGSLVDSEGYEKARPVYVELPGWTESTVGAENFEALPKNAQDYIRFLEEQVGVPVDIISTGPDRNETIVIRDPFKQ

Annotated regions:
phrase: GIGPAYEDKVA
type: ACTIVE_SITE
name: Adenylosuccin_syn_Lys_AS
description: Adenylosuccinate synthase, active site

phrase: QWGDEGK
type: BINDING_SITE
name: Adenylosuccin_syn_GTP-bd
description: Adenylosuccinate synthase, GTP-binding site
Protein sequence:
MNSGLPASAAPLGGAGIPNVKVKFCRYYAKDKTCFYGDECQFLHEDPSMANLSLHGGGSSPVPLSMAGGGGTPAGYSLGGSAAACPGGAGTGVPKKSDALGPTATTLDGQLLAIPGMDAATLSDASLTNSYFSSSFIGVNGFGSPAEPKYSMMQRMTTSSSSPSLLNEGVKNFSHSTHDPVNSPTSSLFSDFGGLSMSHRRKAPNPAASEFIPKGAPRMATMAPSAVQAFPSPLFPHPGLSSSTAAALAPGGTDKPKPLFQITGMSLSAGSSPLHSPKITPHTSPAPRRRSHTPNPANYMVPTTASEQNTQVIQKETVGGTTYFYTDNTPAPMAGMVFPTYHIYPSTAPHVAYMQPKANAPSFFMADELRQELINRHLITMAQIDHSENTDVPSEVDSYHSLFPLEPLPPPNRMQKTGNFSYITSCYKAVNSKDDLPYCLRRIQGFRLVNTKCMMLVDMWKKIQHSNSVTLREVFTTKAFGDHSLVFSYDFHAGAETMYSRHFNDPAADSYFTKRKWGQHEPPPPRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVMDPSKILITGKTRLRVNCVGVFDVLTFDNSQTNHLALMPQYQQADLVSLGKVVLALACNSLAGIQRENLQKAMELVSLNYSSDLKNLILYLLTDQSRLRSVNDIMPMIGARFYTQLDASQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPAWSETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIVSCLNKLDAGVPEK

Annotated regions:
phrase: VNDIMPMIGARFYTQLDASQMRNDVIEEDLAKEVQNGRLFRLLAKLGTINERPEFQKDPAWSETGDRYLLKLFRDHLFHQVTEAGTPWIDLSHIVSCLNKLDAGVPE
type: DOMAIN
name: Pan3_PK
description: Pan3 pseudokinase domain

phrase: NVKVKFCRYYAKDKTCFYGDECQFLHED
type: DOMAIN
name: Znf_CCCH
description: Zinc finger, CCCH-type

phrase: PPPNRMQKTGNFSYITSCYKAVNSKDDLPYCLRRIQGFRLVNTKCMMLVDMWKKIQHSNSVTLREVFTTKAFGDHSLVFSYDFHAGAETMYSRHFNDPAADSYFTKRKWGQHEPPPPRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVMDPSKILITGKTRLRVNCVGVFDVLTFDNSQTNHLALMPQYQQADLVSLGKVVLALACNSLAGIQRENLQKAMELVSLNYSSDLKNLILYLLTDQSRLRSVNDIMPMIGARF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: NVKVKFCRYYAKDKTCFYGDECQFLHE
type: DOMAIN
name: Znf_CCCH
description: Zinc finger, CCCH-type
Protein sequence:
MKFIDEVTLFASSGHGGAGCVAFRREKFIEFGGPNGGDGGKGGDVVFVAKAGLSSLLELRHRPHQKAEKGHNGQGKNRHGASGADLVIKVPVGTVISDAESGEQLADLAENGQRVVLLKGGRGGQGNARFASATHKTPRFAQPGEEGQEAKLRLELKLMADVGLLGLPNAGKSSLITKISAARPKIADYPFTTIKPSLGVVPYKNARSFVMADIPGIIEGAHEGAGLGHRFLKHLERSGILLHLVDISWMPERDPLAEYEAVTRELTMFSPELAAKEQVVVITKLDLPQTREKLAEIRSWFEERGIRVFPISSATGEGVGELLDEIARRLWGRIEEEW

Annotated regions:
phrase: ADVGLLGLPNAGKSSLITKISAARPKIADYPFTTIKPSLGVVPYKNARSFVMADIPGIIEGAHEGAGLGHRFLKHLERSGILLHLVDISWMPERDPLAEYEAVTRELTMFSPELAAKEQVVVITKLDLPQTREKLAEIRSWFEERGIRVFPISSATGEGVGELLDEIARR
type: DOMAIN
name: G_OBG
description: OBG-type guanine nucleotide-binding (G) domain

phrase: IDEVTLFASSGHGGAGCVAFRREKFIEFGGPNGGDGGKGGDVVFVAKAGLSSLLELRHRPHQKAEKGHNGQGKNRHGASGADLVIKVPVGTVISDAESGEQLADLAENGQRVVLLKGGRGGQGNARFASATHKTPRFAQPGEEGQEAKLRLELK
type: DOMAIN
name: GTP1_OBG_dom
description: GTP1/OBG domain

phrase: MKFIDEVTLFASSGHGGAGCVAFRREKFIEFGGPNGGDGGKGGDVVFVAKAGLSSLLELRHRPHQKAEKGHNGQGKNRHGASGADLVIKVPVGTVISDAESGEQLADLAENGQRVVLLKGGRGGQGNARFASATHKTPRFAQPGEEGQEAKLRLELKL
type: DOMAIN
name: GTP1_OBG_dom
description: GTP1/OBG domain

phrase: ADVGLLGLPNAGKSSLITKISAARPKIADYPFTTIKPSLGVVPYKNARSFVMADIPGIIEGAHEGAGLGHRFLKHLERSGILLHLVDISWMPERDPLAEYEAVTRELTMFSPELAAKEQVVVITKLDLPQTREKLAEIRSWFEERGIRVFPISSATGEGVGELLDEIARRL
type: DOMAIN
name: G_OBG
description: OBG-type guanine nucleotide-binding (G) domain

phrase: DVGLLGLPNAGKSSLITKISAARPKIADYPFTTIKPSLGVVPYKNARSFVMADIPGIIEGAHEGAGLGHRFLKHLERSGILLHLVDISWMPERDPLAEYEAVTRELTMFSPELAAKEQVVVIT
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: DIPGIIEGAHEGA
type: CONSERVED_SITE
name: GTP1-OBG_CS
description: GTP1/OBG, conserved site

phrase: VGLLGLPNAGKSSLITKISA
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: RPKIADYPFTTIKPSLGV
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: MADIPGIIEGAHEGA
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: GHRFLKHLERSGILLHLV
type: DOMAIN
name: GTP-bd
description: GTP binding domain
Protein sequence:
MIVVDYITPLMESMKISAYYTIRISIIVLTTVFIVNYIMSTGIMKKLSNMLSPILRRLKVNPLSISSTLACFFSPTVGYSILAEGLKENKVNEREVIGASLANSFPSVLSHTFTFFIPVVVPILGHTGVLYVLIRLGVALAKTIIGFLYLSIISEDYSFEMPEINKLNKKENAKKSFKSTIRFAKRLIPIMFFMMTLVLYLSKIGFFDYVEKFVQPITNLLNLNPNVGILALTEIMNVQAAIVMAGGFLNEGILSSKEVLIGLIIGNVLTFSTRYVKHSLPLHVSLFGAKLGTKIVMVNAAITLLLDIFIIAGLLLI

Annotated regions:
phrase: RISIIVLTTVFIVNYIMSTGIMKKLSNMLSPILRRLKVNPLSISSTLACFFSPTVGYSILAEGLKENKVNEREVIGASLANSFPSVLSHTFTFFIPVVVPIL
type: DOMAIN
name: Gate_dom
description: Nucleoside transporter/FeoB GTPase, Gate domain

phrase: KRLIPIMFFMMTLVLYLSKIGFFDYVEKFVQPITNLLNLNPNVGILALTEIMNVQAAIVMAGGFLNEGILSSKEVLIGLIIGNVLTFS
type: DOMAIN
name: Gate_dom
description: Nucleoside transporter/FeoB GTPase, Gate domain