nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MQALQSSSLRASPPNPLRLPSNRQSHQLITNARPLRRQQRSFISASASTVSAPKRETDPKKRVVITGMGLVSVFGNDVDAYYEKLLSGESGISLIDRFDASKFPTRFGGQIRGFSSEGYIDGKNERRLDDCLKYCIVAGKKALESANLGGDKLNTIDKRKAGVLVGTGMGGLTVFSEGVQNLIEKGHRRISPFFIPYAITNMGSALLAIDLGLMGPNYSISTACATSNYCFYAAANHIRRGEADMMIAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKARDGFVMGEGAGVLVMESLEHAMKRGAPIVAEYLGGAVNCDAHHMTDPRADGLGVSSCIERCLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKSTSGIKINATKSMIGHCLGAAGGLEAIATVKAINTGWLHPSINQFNPEQAVDFDTVPNEKKQHEVDVAISNSFGFGGHNSVVAFSAFKP

Annotated regions:
phrase: KRVVITGMGLVSVFGNDVDAYYEKLLSGESGISLIDRFDASKFPTRFGGQIRGFSSEGYIDGKNERRLDDCLKYCIVAGKKALESANLGGDKLNTIDKRKAGVLVGTGMGGLTVFSEGVQNLIEKGHRRISPFFIPYAITNMGSALLAIDLGLMGPNYSISTACATSNYCFYAAANHIRRGEADMMIAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKARDGFVMGEGAGVLVMESLEH
type: DOMAIN
name: Ketoacyl_synth_N
description: Beta-ketoacyl synthase-like, N-terminal

phrase: AEYLGGAVNCDAHHMTDPRADGLGVSSCIERCLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKSTSGIKINATKSMIGHCLGAAGGLEAIATVKAINTGWLHPSI
type: DOMAIN
name: Ketoacyl_synth_C
description: Beta-ketoacyl synthase, C-terminal

phrase: GPNYSISTACATSNYC
type: ACTIVE_SITE
name: Ketoacyl_synth_AS
description: Beta-ketoacyl synthase, active site

phrase: KKRVVITGMGLVSVFGNDVDAYYEKLLSGESGISLIDRFDASKFPTRFGGQIRGFSSEGYIDGKNERRLDDCLKYCIVAGKKALESANLGGDKLNTIDKRKAGVLVGTGMGGLTVFSEGVQNLIEKGHRRISPFFIPYAITNMGSALLAIDLGLMGPNYSISTACATSNYCFYAAANHIRRGEADMMIAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKARDGFVMGEGAGVLVMESLEHAMKRGAPIVAEYLGGAVNCDAHHMTDPRADGLGVSSCIERCLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKSTSGIKINATKSMIGHCLGAAGGLEAIATVKAINTGWLHPSINQFNPEQAVDFDTVPNEKKQHEVDVAISNSFGFGGHNSVVAFS
type: DOMAIN
name: PKS_Beta-ketoAc_synthase_dom
description: Polyketide synthase, beta-ketoacyl synthase domain

phrase: VVITGMGLVSVFGNDVDAYYEKLLSGESGISLIDRFDASKFPTRFGGQIRGFSSEGYIDGKNERRLDDCLKYCIVAGKKALESANLGGDKLNTIDKRKAGVLVGTGMGGLTVFSEGVQNLIEKGHRRISPFFIPYAITNMGSALLAIDLGLMGPNYSISTACATSNYCFYAAANHIRRGEADMMIAGGTEAAIIPIGLGGFVACRALSQRNDDPQTASRPWDKARDGFVMGEGAGVLVMESLEHAMKRGAPIVAEYLGGAVNCDAHHMTDPRADGLGVSSCIERCLEDAGVSPEEVNYINAHATSTLAGDLAEINAIKKVFKSTSGIKINATKSMIGHCLGAAGGLEAIATVKAINTGWLHPSINQFNPEQAVDFDTVPNEKKQHEVDVAISNSFGFGGHNSVVAFSAFK
type: DOMAIN
name: PKS_Beta-ketoAc_synthase_dom
description: Polyketide synthase, beta-ketoacyl synthase domain
Protein sequence:
MTISNTSPEKRTSGNIVLVGMMGAGKTTVGRMLAKQLGKTFIDSDEEIQKRTGVKISHIFDVEGEEGFRQRESCVIQDLVKLDNIVLATGGGAVLKPDNRAALQANGIVIYLKSGVHDLWQRTRHDHNRPLLQTANPRARLQELFEQRDPIYSAVADHVIHTGKQSVQILIARLIKKISAQDQPRQAIHTMQTLNVGLAERSYQIHIGQNLIRRIDLLLKHIPHKRVAIVSNTTVAPLYLEGLSNTLAANGIQVQSIVLPDGEQYKNSESLNTIYDALLSNRCERNTPLIALGGGVIGDLTGYAAATYLRGVPFIQIPTTLLAQVDSSVGGKTGINHPLGKNMIGAFYQPQVVIADVATLNTLSDKELRAGIAEVIKYGLIRDLPFLEWLEQNIEKLLQRDPEALQYAIVRSCQNKAEVVGADERESGERALLNLGHTFGHAIENAMGYGVWLHGEAVAAGTIMAADLSRRLGWLTQQDVERTKKLFTRSGLPVQGPRLGTEKYMQLMGLDKKVVDGKIRFILLKALGQAVITDEVAIELLGQTLESCSV

Annotated regions:
phrase: RQRESCVIQDLVKLDNIVLATGGGA
type: CONSERVED_SITE
name: Shikimate_kinase_CS
description: Shikimate kinase, conserved site

phrase: IVLPDGEQYKNSESLNTIYDALLSNRCERNTPLIALGGGVIGDLTGYAAATYLRGVPFIQIPTTLLAQVDSSVGGKTGINHPLGKNMIGAFYQPQVVIADVATLNTLSDKEL
type: DOMAIN
name: DHQS/DOIS_N
description: 3-dehydroquinate synthase, N-terminal domain

phrase: GIAEVIKYGLIRDLPFLEWLEQNIEKLLQRDPEALQYAIVRSCQNKAEVVGADERESGERALLNLGHTFGHAIENAMGYGVWLHGEAVAAGTIMAADLSRRLGWLTQQDVERTKKLFTRSGLPVQGPRLGTEKYMQLMGLDKK
type: DOMAIN
name: DHQS_C
description: 3-dehydroquinate synthase, C-terminal domain
Protein sequence:
MRLNRETIKDRAAWEKIGVRPPYFDLDEVEKNTKEQPKWVHFGGGNIFRGFVAAVLQNLLEEGKEDTGINVIELFDYEVIDKVYKPYDNLSIAVTIKPDGDFEKRIIASVMEALKGDPSHPDWERAKEIFRNPSLQLASLTITEKGYNIEDQAGNLFPQVMEDMKNGPVSPQTSMGKVAALLYERFKAGRLPIALLSLDNFSRNGEKLYSSVKRISEEWVKSGLVEKDFIDYLEKDVAFPWSMIDKIVPGPSEFIKEHLEKLGIEGMEIFVTSKRTHIAPFVNMEWAQYLVIEDSFPNGRPKLEGADRNVFLTDRETVEKAERMKVTTCLNPLHTALAIFGCLLGYKKIADEMKDPLLKKLVEGVGEEGIKVVVDPGIINPREFLNEVINIRLPNPYLPDTPQRIATDTSQKMPIRFGETIKAYHERPDLDPRNLKYIPLVIAGWCRYLMGIDDEGREMQLSPDPLLENLRSYVSKIKFGDPESTDDHLKPILSSQQLFRVNLYEVGLGEKIEELFKKMITGPRAVRKTLEEVVGREDG

Annotated regions:
phrase: VEKAERMKVTTCLNPLHTALAIFGCLLGYKKIADEMKDPLLKKLVEGVGEEGIKVVVDPGIINPREFLNEVINIRLPNPYLPDTPQRIATDTSQKMPIRFGETIKAYHERPDLDPRNLKYIPLVIAGWCRYLMGIDDEGREMQLSPDPLLENLRSYVSKIKFGDPESTDDHLKPILSSQQLFRVNLY
type: DOMAIN
name: Mannitol_DH_C
description: Mannitol dehydrogenase, C-terminal

phrase: KWVHFGGGNIFRGFVAAVLQNLLEEGKEDTGINVIELFDYEVIDKVYKPYDNLSIAVTIKPDGDFEKRIIASVMEALKGDPSHPDWERAKEIFRNPSLQLASLTITEKGYNIEDQAGNLFPQVMEDMKNGPVSPQTSMGKVAALLYERFKAGRLPIALLSLDNFSRNGEKLYSSVKRISEEWVKSGLVEKDFIDYLEKDVAFPWSMIDKIVPGPSEFIKEHLEKLGIEGMEIFVTSKRTHIAPFVNMEWAQYLVIEDSFPNGRPKLE
type: DOMAIN
name: Mannitol_DH_N
description: Mannitol dehydrogenase, N-terminal
Protein sequence:
MLTLRAPAKINLFLLITGRNESGFHLLDSVFCFTHDLYDEIIIVPTSATENSVKFIGASQAIGADNSVSRVLRFVNDYAKRYFNVTLVKNLPVAAGIGGGSADAAALLRYFGGLHNISEVLLSQVALSVGFDTLACLYSHPCHVTGMGEKIVALPESKLVYPILLVCPNFPVSSAEVYKNFRERRSIFSAESNLAGDHQAFEDMLSLPNDLTDAAIEIAPVISDVLKSIKNCKGNKVTKLCGSGPTCIGVFDTVENLRDAHSELIRHHKWWVKIAHISL

Annotated regions:
phrase: LAGDHQAFEDMLSLPNDLTDAAIEIAPVISDVLKSIKNCKGNKVTKLCGSGPTCIGVFDTVENLRDAHS
type: DOMAIN
name: GHMP_kinase_C_dom
description: GHMP kinase, C-terminal domain

phrase: SVSRVLRFVNDYAKRYFNVTLVKNLPVAAGIGGGSADAAALLRYFGGLHNISEVLLSQVALSVGFDTLACLY
type: DOMAIN
name: GHMP_kinase_N_dom
description: GHMP kinase N-terminal domain
Protein sequence:
MRRRPAQLTATKLADEEVPELTLVPDGVSRWTGADLDALRNAARRGGAEAAQQDLERKLCRTIDILGARSQQAQEINTVLTSVARLRENSTFRLYLLTQNHRGVGILKVGVKKLFVTHPVTCGLVEVDPLCVLDFYVDESCQRQGYGKTLYSHMLKAEHVSRPEVLAIDRPSNKLLGFLRKHYGLAAYTPQVNNFVVFHSFFDHTTVSERGKLLRAPSPARALPFSSSTNATAAIGGAKAKNWAPG

Annotated regions:
phrase: QLTATKLADEEVPELTLVPDGVSRWTGADLDALRNAARRGGAEAAQQDLERKLCRTIDILGARSQQAQEINTVLTSVARLRENSTFRLYLLTQNHRGVGILKVGVKKLFVTHPVTCGLVEVDPLCVLDFYVDESCQRQGYGKTLYSHMLKAEHVSRPEVLAIDRPSNKLLGFLRKHYGLAAYTPQVNNFVVFHSFFDHTTVSE
type: DOMAIN
name: GNAT_ATAT
description: Gcn5-related N-acetyltransferase (GNAT) domain, ATAT-type

phrase: EAAQQDLERKLCRTIDILGARSQQAQEINTVLTSVARLRENSTFRLYLLTQNHRGVGILKVGVKKLFVTHPVTCGLVEVDPLCVLDFYVDESCQRQGYGKTLYSHMLKAEHVSRPEVLAIDRPSNKLLGFLRKHYGLAAYTPQVNNFVVFHSF
type: DOMAIN
name: GNAT_ATAT
description: Gcn5-related N-acetyltransferase (GNAT) domain, ATAT-type

phrase: LTLVPDGVSRWTGADLDALRNAARRGGAEAAQQDLERKLCRTIDILGARSQQAQEINTVLTSVARLRENSTFRLYLLTQNHRGVGILKVGVKKLFVTHPVTCGLVEVDPLCVLDFYVDESCQRQGYGKTLYSHMLKAEHVSRPEVLAIDRPSNKLLGFLRKHYGLAAYTPQVNNFVVFHSF
type: DOMAIN
name: GNAT_ATAT
description: Gcn5-related N-acetyltransferase (GNAT) domain, ATAT-type
Protein sequence:
MRLDVITIFPEYLDPLRHALLGKAIEKDLLSVGVHDLRLWAEDAHKSVDDSPFGGGPGMVMKPTVWGPALDDVATMSGKAHMGAQLDSARVHVDKPRHDELEGIQFAGYDAAEVAEADKPLLLVPTPAGAPFTQEDARAWSNEEHIVFACGRYEGIDQRVIEDAKKTYRVREVSIGDYVLIGGEVAVLVIAEAVVRLIPGVLGNTQSHQDDSFSDGLLEGPSYTKPREWRGLEVPEVLTSGNHAKIERWRREQSLKRTWEVRPELLDGMELDRHDQAYVEGLRRGNTSDNLN

Annotated regions:
phrase: AAEVAEADKPLLLVPTPAGAPFTQEDARAWSNEEHIVFACGRYEGIDQRVIEDAKKTYRVREVSIGDYVLIGGEVAVLVIAEAVVRLIPGVLGNTQSHQDDSFSDGLLEGPSYTKPREWRGLEVPEVLTSGNHAKIERWRREQSLKRTWEVR
type: DOMAIN
name: tRNA_MeTrfase_TRMD/TRM10
description: tRNA methyltransferase TRMD/TRM10-type domain

phrase: GKAIEKDLLSVGVHDLRLWAEDAHKSVDDSPFGGGPGMVMKPTVWGPALDDVATMS
type: DOMAIN
name: tRNA_MeTrfase_TRMD/TRM10
description: tRNA methyltransferase TRMD/TRM10-type domain
Protein sequence:
MTALLELCNVSRSYPSGEEQVAVLKDISLQIHAGEMVAIVGVSGSGKSTLMNILGCLDKPTSGTYRVAGRDVSTLDPDALAQLRREHFGFIFQRYHLLSHLTAAQNVEIPAVYAGIERKKRQARARELLLRLGLSDRVDYPPSQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILRQLRDRGHTVIIVTHDPLIAAQAERIIEIHDGKIVHNPPAQEKKREQGVDAAVVNTAPGWRQFASSFREALSMAWLAMAANKMRTLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRAMGTNTIDIHPGKDFGDDNPQYRQALKYDDLVAIQKQPWVNSATPSVSKSLRLRYGNIDIAVNANGVSGDYFNVYGMSFREGNTFNAVQQQDRAQVVVLDANTRRQLFPNKANVVGEVVLAGNMPVIVIGVAEEKPSMYGNSNLLQVWLPYSTMSDRIMGQSWLNSITVRVKDGVDSDQAEQQLTRLLTLRHGKKDFFTWNMDSVLKTAEKTTYTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGISLSMFIAFMLQLFLPGWEIGFSLTALASAFLCSTFTGILFGWLPARNAARLDPVDALARE

Annotated regions:
phrase: AGEMVAIVGVSGSGKSTLMNILGCLDKPTSGTYRVAGRDVSTLDPDALAQLRREHFGFIFQRYHLLSHLTAAQNVEIPAVYAGIERKKRQARARELLLRLGLSDRVDYPPSQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILRQLRDRGHTVIIVTHDPLIAAQAERIIEIHDG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LELCNVSRSYPSGEEQVAVLKDISLQIHAGEMVAIVGVSGSGKSTLMNILGCLDKPTSGTYRVAGRDVSTLDPDALAQLRREHFGFIFQRYHLLSHLTAAQNVEIPAVYAGIERKKRQARARELLLRLGLSDRVDYPPSQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILRQLRDRGHTVIIVTHDPLIAAQAERIIEIHDGK
type: DOMAIN
name: MacB-like_ATP-bd
description: MacB-like, ATP-binding domain

phrase: LKDISLQIHAGEMVAIVGVSGSGKSTLMNILGCLDKPTSGTYRVAGRDVSTLDPDALAQLRREHFGFIFQRYHLLSHLTAAQNVEIPAVYAGIERKKRQARARELLLRLGLSDRVDYPPSQLSGGQQQRVSIARALMNGGQVILADEP
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: LELCNVSRSYPSGEEQVAVLKDISLQIHAGEMVAIVGVSGSGKSTLMNILGCLDKPTSGTYRVAGRDVSTLDPDALAQLRREHFGFIFQRYHLLSHLTAAQNVEIPAVYAGIERKKRQARARELLLRLGLSDRVDYPPSQLSGGQQQRVSIARALMNGGQVILADEPTGALDSHSGEEVMAILRQLRDRGHTVIIVTHDPLIAAQAERIIEIHDGKIVHNPPAQEKKREQGVDAAVVN
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: LSGGQQQRVSIARA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: LVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARASDVLQQFLIEAVLVCLVGGALGISLSMFIAFMLQLFLPGWEIGFSLTALASAFLCSTFTGILFGWLPARNAARLD
type: DOMAIN
name: ABC3_permease_C
description: ABC3 transporter permease, C-terminal

phrase: TLLTMLGIIIGIASVVSIVVVGDAAKQMVLADIRAMGTNTIDIHPGKDFGDDNPQYRQALKYDDLVAIQKQPWVNSATPSVSKSLRLRYGNIDIAVNANGVSGDYFNVYGMSFREGNTFNAVQQQDRAQVVVLDANTRRQLFPNKANVVGEVVLAGNMPVIVIGVAEEKPSMYGNSNLLQVWLPYSTMSDRIMGQSWLNSITVRVKDGVDSDQAEQQLT
type: DOMAIN
name: MacB_PCD
description: MacB-like periplasmic core domain
Protein sequence:
MEQHLDAYCMHLRSERQVSPHTLEAYRRDLSKVLAYCQKARLSSWNDLDIQHLRSFTARQHQQGQSSRSLARMLSAVRGFYKYLNREGLCQHDPANGLSPPKGERRLPKTLDTDRTAQLLDGGVEDDFLAHRDQAIMELLYSSGLRLSELTGLNLDQLDLRDGLVQVLGKGSKTRVLPVGSKARQALETWLPLRALTNPQDDAVFVSQQGKRLGPRAVQLRIKTAGERELGQNLHPHMLRHSFASHLLESSQDLRAVQELLGHADIKTTQIYTHLDFQHLATVYDSAHPRAKRKGAADD

Annotated regions:
phrase: MEQHLDAYCMHLRSERQVSPHTLEAYRRDLSKVLAYCQKARLSSWNDLDIQHLRSFTARQHQQGQSSRSLARMLSAVRGFYKYL
type: DOMAIN
name: CB
description: Core-binding (CB) domain

phrase: TDRTAQLLDGGVEDDFLAHRDQAIMELLYSSGLRLSELTGLNLDQLDLRDGLVQVLGKGSKTRVLPVGSKARQALETWLPLRALTNPQDDAVFVSQQGKRLGPRAVQLRIKTAGERELGQNLHPHMLRHSFASHLLESSQDLRAVQELLGHADIKTTQIYTHLDFQ
type: DOMAIN
name: Integrase_catalytic
description: Integrase, catalytic domain

phrase: LDAYCMHLRSERQVSPHTLEAYRRDLSKVLAYCQKARLSSWNDLDIQHLRSFTARQHQQGQSSRSLARMLSAVRGFYKYLNRE
type: DOMAIN
name: Integrase_SAM-like_N
description: Integrase, SAM-like, N-terminal

phrase: RLPKTLDTDRTAQLLDGGVEDDFLAHRDQAIMELLYSSGLRLSELTGLNLDQLDLRDGLVQVLGKGSKTRVLPVGSKARQALETWLPLRALTNPQDDAVFVSQQGKRLGPRAVQLRIKTAGERELGQNLHPHMLRHSFASHLLESSQDLRAVQELLGHADIKTTQIYTHLDFQHLATVY
type: DOMAIN
name: Integrase_catalytic
description: Integrase, catalytic domain
Protein sequence:
MGKDNASYLQAFILVGSSDRPGLEKILFAVILIFCILTLVGNTAIILLLVMDVRLHTPMYFFLGNLSFLDLCFTASIAPQLLWNLGGPEKTITYHGCVAQLYIYMMLGSTECVLLVVMSHDRYVAVCRSLHYMAVMRPHLCLQLVTVAWCCGFLNSFIMCPQTMQLSRCGRRRVDHFLCEMPALIAMSCEETMLVEAIHLCPGGGSPPGAALPHPHLLWRDCSRGAEDEVSSRAKESLPHLLFSPHSGLSLLRNHHLRVPEAGQQLLPRSGEVPDSLLHHRHSQHQPPHLHFEEQGCEGDHEETSGVGERGWGASTRGTL

Annotated regions:
phrase: GNTAIILLLVMDVRLHTPMYFFLGNLSFLDLCFTASIAPQLLWNLGGPEKTITYHGCVAQLYIYMMLGSTECVLLVVMSHDRYVAVCRSLHYMAVMRPHLCLQLVTVAWCCGFLNSFIMCPQTMQLSRCGRRRVDHFL
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM
Protein sequence:
MIRRLHDTNDLVRAFPRVHFVGIGGTGMSGIAEVMLTLGYEVSGSDNADNVATRRLASLGARIMRGHSAANVLGTDCVVVSSAIREDNPELMEARSQRIPIMPRAAMLAELMRFRRGIAVAGTHGKTTTTSLTAAVLSEGGLDPTFVIGGQLLAAGANAKLGGGQWLVAEADESDGSFLRLNPLMSIITNIDADHLENYGNDFARVQAAFAEFLQRLPFYGLAVLCIDDPEVAALAARTPRHVMSYGMSPQADVRAENVVQEGSRMRFTLRLPQGTSQEVVLALPGRHNVLNALAAAAVGWQLGVAPDAIARALEGFAGVGRRFNDLGEVTTASGAKVRIIDDYGHHPSELEAVFAAARGGWADKRLVVAFQPHRYSRTRDQFDKFAAVLSSVDALVLSEVYPAGEEPIAGADSHALARAIRARGRSEPVVVGKAAELASVLPDVLQDGDLLLMMGAGDIGAVATHIAVEGFKGEGEA

Annotated regions:
phrase: VHFVGIGGTGMSGIAEVMLTLGYEVSGSDNADNVATRRLASLGARIMRGHSAANVLGTDCVVVSSAIREDNPELMEARSQRIPIMPRAAMLAELMRF
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: VAGTHGKTTTTSLTAAVLSEGGLDPTFVIGGQLLAAGANAKLGGGQWLVAEADESDGSFLRLNPLMSIITNIDADHLENYGNDFARVQAAFAEFLQRLPFYGLAVLCIDDPEVAALAARTPRHVMSYGMSPQADVRAENVVQEGSRMRFTLRLPQGTSQEVVLALPGRHNVLNALAAAA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: SGAKVRIIDDYGHHPSELEAVFAAARGGWADKRLVVAFQPHRYSRTRDQFDKFAAVLSSVDALVLSEVYPAGEEPIAGADSHALARAIRARGRSEPVVVGKAAELASVLPDVLQDGDLLLMMGA
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MSTQGFLKPRSIEVEPVGAHHAKIVMEPFERGYGHTLGNALRRILLSSMTGYAPTEVQMTGVVHEYSTIAGVREDVVDILLNLKGVVFKLHNRDEVTLVLRKNGAGAVVASDIELPHDVEIINPDHLICNLTDAGKIEMQVKVEKGRGYVPGNVRALSEDRTHTIGRIVLDASFSPVRRVSYAVESARVEQRTDLDKLVLDIETNGVISPEEAVRQAARILMDQISVFAALEGAGDAYEPPVRGTPQIDPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEIKEVLAARGLTLGMKLENWPPLGLERP

Annotated regions:
phrase: EPFERGYGHTLGNALRRILLSSMTGYAPTEVQMTGVVHEYSTIAGVREDVVDILLNLKGVVFKLHNRDEVTLVLRKNGAGAVVASDIELPHDVEIINPDHLICNLTDAGKIEMQVKVEKGRGYVPGNVRALSEDRTHTIGRIVLDASFSPVRRVSYAVESARVEQRTDLDKLVLDIETNGVISPEEAVRQAARILMD
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: DPVLLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLNEIKEVL
type: DOMAIN
name: RNAP_asu_C
description: RNA polymerase, alpha subunit, C-terminal

phrase: VQMTGVVHEYSTIAGVREDVVDILLNLKGVVFKLHNRDEVTLVLRKNGAGAVVASDIELPHDVEIINPDHLICNLTDAGKIEMQVKVEKGRGYVPGNVRALSEDRTHTIGRIVLDASF
type: DOMAIN
name: DNA-dir_RNA_pol_insert
description: DNA-directed RNA polymerase, insert domain

phrase: HAKIVMEPFERGYGHTLGNALRRILLSSMTGYAPTEVQMTGVVHEYSTIAGVREDVVDILLNLKGVVFKLHNRDEVTLVLRKNGAGAVVASDIELPHDVEIINPDHLICNLTDAGKIEMQVKVEKGRGYVPGNVRALSEDRTHTIGRIVLDASFSPVRRVSYAVESARVEQRTDLDKLVLDIETNGVISPEEAVRQAARILMDQISVFAA
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type
Protein sequence:
MADKSGRLLGGCSFVLDEADCSDLEIDSDDESDKENVPNGQDMCNSFDAEFIDNAPLAQGNTLALFQSQVAQAGKQKVNYLKRKLHLESSELGTVGRAVLQPVNHSTPAAKRRLFECSSSENEVSYAASPAAANTQVFRNQNSGSVGGSSGFGSQASVSQSQQNSNLHLQILKSKNSAACKLAVFKFVYAASFCDLTRPFKNDKTTNYQWVAAVFGVSEELFEASKQLLGRSCTYLHATCRAHEKGSVALLLLSFHVAKSRETVTNLLKNLLNLRAEHMMLQPPKLRGVTSAMFWYKMTLSPNTYTWGQLPRWIEQQILITENSSEVLKFDFSHMVQWALDNEMMDESSIAFHYAQMADHDSNARAWLGLSNQAKIVKDVCTMVHHYQRAIMRSMTMSAYVHKMCERVNVTGSWLVIMQFLKFHGIEPIRFVNALRPWLQGVPKKNCLAFIGPPDTGKSLFTNSLMSFLKGKVLNFANSASHFWLAPLTEAKVALIDDATHACLKYCDTYLRNFFDGYSVCIDRKHKNAVQIKAPPMLLTSNIDIQAEEKYSYLKSRVTCFYFNDKCPLNEDGKPLFQITDPDWKSFFERLWQRLELSDQEEEEEGDENGSRGTFICSTRNSNDFT

Annotated regions:
phrase: GSWLVIMQFLKFHGIEPIRFVNALRPWLQGVPKKNCLAFIGPPDTGKSLFTNSLMSFLKGKVLNFANSASHFWLAPLTEAKVALIDDATHACLKYCDTYLRNFFDGYSVCIDRKHKNAVQIKAPPMLLTSNIDIQAEEKYSYLKSRVTCFYFNDKCPLNEDGKP
type: DOMAIN
name: Helicase_SF3_DNA-vir
description: Helicase, superfamily 3, DNA virus

phrase: FKFVYAASFCDLTRPFKNDKTTNYQWVAAVFGVSEELFEASKQLLGRSCTYLHATCRAHEKGSVALLLLSFHVAKSRETVTNLLKNLLNLRAEHMMLQPPKLRGVTSAMFWYKMTLSPNTYTWGQLPRWIEQQILIT
type: DOMAIN
name: PPV_E1_DBD
description: DNA helicase E1, DNA-binding domain, papillomavirus

phrase: KFDFSHMVQWALDNEMMDESSIAFHYAQMADHDSNARAWLGLSNQAKIVKDVCTMVHHYQRAIMRSMTMSAYVHKMCERVNVTGSWLVIMQFLKFHGIEPIRFVNALRPWLQGVPKKNCLAFIGPPDTGKSLFTNSLMSFLKGKVLNFANSASHFWLAPLTEAKVALIDDATHACLKYCDTYLRNFFDGYSVCIDRKHKNAVQIKAPPMLLTSNIDIQAEEKYSYLKSRVTCFYFNDKCPLNEDGKPLFQITDPDWKSFFERLWQRLELSDQEEEEEGDENGSRGTFI
type: DOMAIN
name: PPV_DNA_helicase_E1_C
description: DNA helicase E1, C-terminal, Papillomavirus

phrase: LGGCSFVLDEADCSDLEIDSDDESDKENVPNGQDMCNSFDAEFIDNAPLAQGNTLALFQSQVAQAGKQKVNYLKRKLHLESSELGTVGRAVLQPVNHSTPAAKRRLFEC
type: DOMAIN
name: PPV_DNA_helicase_E1_N
description: DNA helicase E1, N-terminal, Papillomavirus
Protein sequence:
MEVLMAERANLVFHNKAIDGTAMKRLISRLIEHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSLILEKHHHYGNVHAVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTARGISVSPRNGMMPERIFSQTLIGRVLADDIYMGPRCIATRNQDIGIGLVNRFITFRAQPISIRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCSIDLYVTIESEDILHNVNIPPKSLLLVQNDQYVESEQVIAEIRAGISTLNFKEKVRKHIYSDSDGEMHWSTDVYHAPEFTYGNVHLLPKTSHLWILLGGPCKSSLVYLSIHKDQDQMNAHSLSGKQRYTSNLSVTNDQARQKLFSSGFSGKKEDRIPDYSDLNRIICTGQYNLVYSPILHENSDLLSKRRRNKFIIPLHSIQELENELMPCSGISIEIPVNGIFRRNSILAYFDDPRYRRKSSGIIKYGTIETHSVIKKEDLIEYRGVKEFRPKYQMKVDRFFFIPEEVHILPGSSSIMVRNNSIVGVDTQITLNLRSRVGGLVRVERKKKRIELKIFSGDIHFPGETDKISRHTGLLIPPGTGKINSKESKKVKKWIYVQRITPSKKKFFVLVRPVVTYEITDGINFETLFPPDPLQERDNVQLRIVNYILYGNGKPIRGISDTSIQLVRTCLVLNWNQDKKSSSCEEARASFVEIRTNGLIRHFLRINLVKSPISYIGKRNDPSGSGLLSDNGSDCTNINPFSSIYSYSKAKIQQSLNQPQGTIHTLLNRNKECQSLIILSSANCSRMGTLKYHSVIKDSIKKDPLIPIRNSLGPLGTCLPIENFYSSYRLITHNQILVTNYLQLDNLKQTFQVIKFKYYLMDENGKIFNPDPCRNIILNPFNLNWYFLHHNYCEETSKIISLGQFICENVCIAKNGPPLKSGQVILVQVDSIVIRSAKPYLATPGATVHGHYGETLYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSIDSISMNLEKRVEGWNKCITRILGIPWGFLIGAELTIAQSRISLVNKIQQVYRSQGVQIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERMGRALEEAICYRVVLLGITRASLNTQSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGVIPVGTGFKGLVHPSKQHNNIPLETKKKNLFEGEMRDILFHHRKLFDSCLSKKFHDIPEQSFIGFNDS

Annotated regions:
phrase: LTIAQSRISLVNKIQQVYRSQGVQIHNRHIEIIVRQITSKVLVSEDGMSNVFSPGELIGLLRAERMGRALEEAICYRVVLLGITRA
type: DOMAIN
name: RNA_pol_Rpb1_5
description: RNA polymerase Rpb1, domain 5

phrase: GLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRRTDCGTARGISVSPRNGMMPERIFSQTLIGRVLADDIYMGPRCIATRNQDIGIGLVNRFITFRAQPISIRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEHVRAPSNGKIKFNE
type: DOMAIN
name: RNA_pol_Rpb1_5
description: RNA polymerase Rpb1, domain 5

phrase: AVEKLRQSIEIWYATSEYLRQEMNPNFRMTDPFNPVHIMSFSGARGNASQVHQLVGMRGLMSDP
type: DOMAIN
name: RNA_pol_Rpb1_4
description: RNA polymerase Rpb1, domain 4
Protein sequence:
MTGDDFAVALDKIRLRLGTQNFDLDCTFPQGQVTAVVGASGSGKSTLLNLVAGFEVPDFGRVVIHGQDMAASDPSERPVSSIFQDNNLFAHLDIFTNVALGVSPGLKLRAEDRQRIEVALARVGLAGFDKRLPGTLSGGERQRAALARALVRQKPVMLLDEPFAALDPGLRAGMTALLLDLHAETKNTVIIVTHHPDDIKKLAQRVVFLDRGRVVYAGSTADFFATQNVKAVDSFLNG

Annotated regions:
phrase: DLDCTFPQGQVTAVVGASGSGKSTLLNLVAGFEVPDFGRVVIHGQDMAASDPSERPVSSIFQDNNLFAHLDIFTNVALGVSPGLKLRAEDRQRIEVALARVGLAGFDKRLPGTLSGGERQRAALARALVRQKPVMLLDEPF
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: QGQVTAVVGASGSGKSTLLNLVAGFEVPDFGRVVIHGQDMAASDPSERPVSSIFQDNNLFAHLDIFTNVALGVSPGLKLRAEDRQRIEVALARVGLAGFDKRLPGTLSGGERQRAALARALVRQKPVMLLDEPFAALDPGLRAGMTALLLDLHAETKNTVIIVTHHPDDIKKLAQRVVFLDRG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: MTGDDFAVALDKIRLRLGTQNFDLDCTFPQGQVTAVVGASGSGKSTLLNLVAGFEVPDFGRVVIHGQDMAASDPSERPVSSIFQDNNLFAHLDIFTNVALGVSPGLKLRAEDRQRIEVALARVGLAGFDKRLPGTLSGGERQRAALARALVRQKPVMLLDEPFAALDPGLRAGMTALLLDLHAETKNTVIIVTHHPDDIKKLAQRVVFLDRGRVVYAGSTADFFATQNVKAVDSF
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: LSGGERQRAALARA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site
Protein sequence:
MQGLEPSRVGRVGEVCRSVHKNVLTVPEHTVGTEAAAPMGDQADWMSQLCPQLWDVPLHHLSIPGSHDTMTYCLNRKSRISRASSWLLHLLGRVVPFITGPVVMKWSVTQTLDVTQQLDAGVRYLDLRIAHAPEGSTRNLCFVHMMYTKALVEDTLTEIAEWLQSHPREVVILACRNFEGMTCELHDYLAGCIVNIFGDMLCPSGEVPTLRQLWAREQQVIVSYEDEATVSRYDQLWPAIPYWWGNAVKTDVLLRFLETMKGQGRPDGLFVAGINITENLCYILLHPVDSLEEMTRRSLPLMTEWVCAQQPGQSPQCTNIIAGDFVDADGFVSKVISLNCKLLSP

Annotated regions:
phrase: QLWDVPLHHLSIPGSHDTMTYCLNRKSRISRASSWLLHLLGRVVPFITGPVVMKWSVTQTLDVTQQLDAGVRYLDLRIAHAPEGSTRNLCFVHMMYTKALVEDTLTEIAEWLQSHPREVVILACRNFEGMTCELHDYLAGCIVNIFGDMLCPSGEVPTLRQLWAREQQVIVS
type: DOMAIN
name: PLipase_C_PInositol-sp_X_dom
description: Phosphatidylinositol-specific phospholipase C, X domain

phrase: WSVTQTLDVTQQLDAGVRYLDLRIAHAPEGSTRNLCFVHMMYTKALVEDTLTEIAEWLQSHPREVVILACRNFEGMTCELHDYLAGCIVNIFGDMLCPSG
type: DOMAIN
name: PLipase_C_PInositol-sp_X_dom
description: Phosphatidylinositol-specific phospholipase C, X domain
Protein sequence:
MLLKDLSTYLIASQIQGDGETNCNGIVIDSRKVQPGDLFLCLPGHTVDGHDYAQRAAEQGASALVVERWLEDVSLPQLKVKDSRLAMAVLGNVFFQTPSSQLKVIGVTGTNGKTTTTYLIERILQEQGKNTGLIGTIERRYNGQTFPMSGTTPESLDLQRYLHEMVQAQTQYCAMEVSSHALEQGRVKGTNFRTAVFTNLTQDHLDYHKTMDEYRAVKGLFFSRLGNTYAADPESRSYAVLNVDDEASAYYAKQTAAEIFTYGVDNKADVSASNIAVTSKGTFFHVDSPYGSTDISLRMVGKFNVYNALAAIAATLLEGIALEDIKASLESIPGVEGRVEAVEEGQDFAVIVDYAHSPDGLENVLKTVNEFAKGRVICVFGCGGDRDRTKRPIMGRIAAQYADHVIVTSDNPRTEDPELILKDIKVGLEEANVSSEQYELIIDRREAIQKAIEMASHEDVVLIAGKGHETYQLIGTAVHDFDDRVVAKEAIRGLAK

Annotated regions:
phrase: VTGTNGKTTTTYLIERILQEQGKNTGLIGTIERRYNGQTFPMSGTTPESLDLQRYLHEMVQAQTQYCAMEVSSHALEQGRVKGTNFRTAVFTNLTQDHLDYHKTMDEYRAVKGLFFSRLGNTYAADPESRSYAVLNVDDEASAYYAKQTAAEIFTYGVDNKADVSASNIAVTSKGTFFHVDSPYGSTDISLRMVGKFNVYNALAAIA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRVEAVEEGQDFAVIVDYAHSPDGLENVLKTVNEFAKGRVICVFGCGGDRDRTKRPIMGRIAAQYADHVIVTSDNPRTEDPELILKDIKVGLEEANVSSEQYELIIDRREAIQKAIEMASHEDVVLIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: NGIVIDSRKVQPGDLFLCLPGHTVDGHDYAQRAAEQGASALVVE
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: IGVTGTNGKTTTTYLIERILQEQG
type: CONSERVED_SITE
name: Folylpolyglutamate_synth_CS
description: Folylpolyglutamate synthetase, conserved site
Protein sequence:
MLKSSSSLVAKSILRHQCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHSDKIYAVLQLTGAWMNLDVDYDDQDNHCFCS

Annotated regions:
phrase: PNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLL
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: TSLIDMYAKCGSIGDAWSVF
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: YACMVDVLSRAGLVKDAHDFISE
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: WNFVIRGFSNSRNPEKSISVYIQMLRFG
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: DALMWNAIIGGLASHGFIRESLQLFHKMRESKID
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: NLVTWNSILDAYAKSGDVVSARLVFDEMSE
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: MWNAIIGGLASHGFIRESLQLFHKMRESKIDPD
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: VTWSSMIDGYVKRGEYNKALEIFDQMMRM
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: VTWNSILDAYAKSGDVVSARLVFDEMSERDV
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: WNFVIRGFSNSRNPEKSISVYIQMLRFGLLP
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: ITFLCLLAACSHGGLVKEAWHFFKSLKESGAE
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: HGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHS
type: REPEAT
name: E_motif
description: E motif

phrase: DEITFLCLLAACSHGGLVKEAWHFFKSLKESGAE
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: DALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAAC
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: RDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACA
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: VVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAY
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: DVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSS
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat