nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MNATTEQEAIVKVLFTTTEQGLELPESKRLLLVPADIRRYGLSRVLNSESMLNTAAPIPFDFLVNGTFLRTTLEDYLKENGLPFEKTVTLQYVRSLVPPAYEASFEHDDWVSSVDLLSATSSAGKWSGSSFLQGQDRILSASYDGLLRIWNGSGQALATSSVVNRGPLCGLKSAKFMSSTKIAAAGLDRTVRIWDYTEADDHFSGQLKPTLELYGHRSIIESLGVDGSSRRILTACADGSIGLWTTSKKLAPEAPTALLPQTYATKRRKGSTTSANIIAQRGALSLIPVHSRPVSAAIFDPQNQHTAYSASQDHTLKVLDLTTSRVVSTITTSNALMSACYLSNKSAPLIAAGTSSRNVTLIDPRESAAATSVMTLRGHINVVSSVSASPDNEYSLVSGSHDGTCRIWDLRSVRPAAGKEETGLGSVGESVYLIERESLGDKKRPLAGEGVKVFDVQWDKTWGIVSGGEDKKVQINKGRNIISS

Annotated regions:
phrase: LRGHINVVSSVSASPDNEYSLVSGSHDGTCRIWDLR
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: KPTLELYGHRSIIESLGVDGSSRRILTACADGSIGL
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: SVMTLRGHINVVSSVSASPDNEYSLVSGSHDGTCRIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: SSTKIAAAGLDRTVRIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: EHDDWVSSVDLLSATSSAGKWSGSSFLQGQDRILSASYDGLLRIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LGDKKRPLAGEGVKVFDVQWDKTWGIVSGGEDKKVQIN
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: PPAYEASFEHDDWVSSVDLLSATSSAGKWSGSSFLQGQDRILSASYDGLLRIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: SGQALATSSVVNRGPLCGLKSAKFMSSTKIAAAGLDRTVRIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: QLKPTLELYGHRSIIESLGVDGSSRRILTACADGSIGLW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: QRGALSLIPVHSRPVSAAIFDPQNQHTAYSASQDHTLKVL
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: TSRVVSTITTSNALMSACYLSNKSAPLIAAGTSSRNVTLI
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: AATSVMTLRGHINVVSSVSASPDNEYSLVSGSHDGTCRIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LVSGSHDGTCRIWD
type: CONSERVED_SITE
name: WD40_repeat_CS
description: WD40 repeat, conserved site

phrase: LYGHRSIIESLGVDGSSRRILTACADGSIGL
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: VKVLFTTTEQGLELPESKRLLLVPADIRRYGLSRVLNSESMLNTAAPIPFDFLVNGTFLRTTLEDY
type: DOMAIN
name: NLE
description: NLE

phrase: ILSASYDGLLRIWN
type: REPEAT
name: G-protein_beta_WD-40_rep
description: G-protein beta WD-40 repeat

phrase: IAAAGLDRTVRIWD
type: REPEAT
name: G-protein_beta_WD-40_rep
description: G-protein beta WD-40 repeat

phrase: LVSGSHDGTCRIWD
type: REPEAT
name: G-protein_beta_WD-40_rep
description: G-protein beta WD-40 repeat
Protein sequence:
MAAKIRREDEVIILAGKDKGSRGKVSQVLPTGKLIVEGFNLVKKHQKPNPQLGVAGGVIEKEAPMQASNVAIFNQATGKADRVGFRFEDGKKVRFFKSNSELVK

Annotated regions:
phrase: DEVIILAGKDKGSRGKVSQVLPTGKLIVEGFNLVKKHQKPNPQLGVAGGVIEKEAPMQASNVA
type: DOMAIN
name: Ribosomal_uL24_KOW
description: Large ribosomal subunit protein uL24, KOW domain

phrase: EDEVIILAGKDKGSRGK
type: CONSERVED_SITE
name: Ribosomal_uL24_CS
description: Large ribosomal subunit protein uL24, conserved site

phrase: DEVIILAGKDKGSRGKVSQVLPTGKLI
type: DOMAIN
name: KOW
description: KOW

phrase: KIRREDEVIILAGKDKGSRGKVSQVLP
type: DOMAIN
name: KOW
description: KOW
Protein sequence:
MSLDKIMNEAISPWMKGDGPDSDIVLSSRIRLARNFKKYQFSTMQNEEEAKLIQELFKKEFINKTVEPFGEFELLKMNELTPLQRRVLVEKHLISPNLAGTEYGACLLSESEHISVMLNEEDHIRIQCLFSGLQLSEALQSANQIDNWIEKEVEYAFDESLGYITSCPTNVGTGLRASVMIHLPGLVLTKRISRIIQVIQKLGLVVRGIYGEGSEALGNIFQVSNQMTLGKSEEDIIADLKSVIQQIIQQEKMARELIVQNSSIELEDKVYRSYGILANSRLIQSAEAANCLSDLRLGIDLGYIKGISRNILTELMVLTQPGILQQYAGGPLGPEERDYRRATLIRERLRIEKN

Annotated regions:
phrase: ELFKKEFINKTVEPFGEFELLKMNELTPLQRRVLVEKHLISPNLAGTEYGACLLSESEHISVMLNEEDHIRIQCLFSGLQLSEALQSANQIDNWIEKEVEYAFDESLGYITSCPTNVGTGLRASVMIHLPGLVLTKRISRIIQVIQKLGLVVRGIYGEGSEALGNIFQVSNQMTLGKSEEDIIADLKSVIQQIIQQEK
type: DOMAIN
name: ATP-guanido_PTrfase_cat
description: ATP:guanido phosphotransferase, catalytic domain

phrase: CPTNVG
type: ACTIVE_SITE
name: ATP-guanido_PTrfase_AS
description: ATP:guanido phosphotransferase active site

phrase: IVLSSRIRLARNFKKYQFSTMQNEEEAKLIQELFKKEFINKTVEPFGEFELLKMNELTPLQRRVLVEKHLISPNLAGTEYGACLLSESEHISVMLNEEDHIRIQCLFSGLQLSEALQSANQIDNWIEKEVEYAFDESLGYITSCPTNVGTGLRASVMIHLPGLVLTKRISRIIQVIQKLGLVVRGIYGEGSEALGNIFQVSNQMTLGKSEEDIIADLKSVIQQIIQQEKM
type: DOMAIN
name: ATP-guanido_PTrfase_cat
description: ATP:guanido phosphotransferase, catalytic domain
Protein sequence:
MEFESVIGLEVHAELLTNTKIYCGCTTEFGGKPNTHVCPVCLGLPGSLPQLNKRVLELGIKAGLALNCEITKVGRMDRKNYFYPDCPKNYQITQDELPICRNGYIDIELESGEVKRIGIERIHIEEDAGKLLHTKRGTLVDFNRAGVPLIEVVSKPDIRTPEEATLYLTKLRSILSSAQISDCKMEEGSLRCDGNISIRERGTEPFGIRSEIKNMNSFKALEKALNYEFDRQVEAVTNGEALSVETRRWDETNNKTIVMRSKEQANDYRYFPEGDLVTLNVSDEWIEEIRNTIPELPYQKADRFVKEYGLPKYDAHVLTLTDSMADYFDECAKLSGDPKAASNWIMGDISRLMKEESTWIEDLKFSPKDLAELIEVIKEGTISSAIGKKVLEDMFAEGKSPKTIIDEKGLKQNNDEGAIRQLVNKVLDENPQVIEQYKSGRTRILGFAVGQVMKETKGQANPGIVNKLVTEEVEKR

Annotated regions:
phrase: DYFDECAKLSGDPKAASNWIMGDISRLMKEESTWIEDLKFSPKDLAELIEVIKEGTISSAIGKKVLEDMFAEGKSPKTIIDEKGLKQNNDEGAIRQLVNKVLDENPQVIEQYKSGRTRILGFAVGQVMKETKGQANPGIVNKLVTE
type: DOMAIN
name: Asn/Gln_amidotransferase
description: Asn/Gln amidotransferase

phrase: FNRAGVPLIEVVSK
type: CONSERVED_SITE
name: Gln-tRNA_amidoTrfase_suB_CS
description: Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site

phrase: DYFDECAKLSGDPKAASNWIMGDISRLMKEESTWIEDLKFSPKDLAELIEVIKEGTISSAIGKKVLEDMFAEGKSPKTIIDEKGLKQNNDEGAIRQLVNKVLDENPQVIEQYKSGRTRILGFAVGQVMKETKGQANPGIVNKLVTEE
type: DOMAIN
name: Asn/Gln_amidotransferase
description: Asn/Gln amidotransferase

phrase: VIGLEVHAELLTNTKIYCGCTTEFGGKPNTHVCPVCLGLPGSLPQLNKRVLELGIKAGLALNCEITKVGRMDRKNYFYPDCPKNYQITQDELPICRNGYIDIELESGEVKRIGIERIHIEEDAGKLLHTKRGTLVDFNRAGVPLIEVVSKPDIRTPEEATLYLTKLRSILSSAQISDCKMEEGSLRCDGNISIRERGTEPFGIRSEIKNMNSFKALEKALNYEFDRQVEAVTNGEALSVETRRWDETNNKTIVMRSKEQANDYRYFPEGDLVTLNVSDEWI
type: DOMAIN
name: Asn/Gln-tRNA_Trfase_suB/E_cat
description: Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic
Protein sequence:
MPRRPLLEFEKPLVELEQQIEQIRQLARDSEVDVTQQLQQLESLASRRRQEIFQGLTPAQKIQVARHPHRPSTLDFIQMFCDDFVELHGDRRGNDDQALIGGVGRLGDRAVLLLGHQKGRDTKENVARNFGMATPGGYRKAMRLMEHADRFRLPILTFIDTPGAYAGLQAEEQGQGEAIAVNLRDMFGLRVPVIATVIGEGGSGGALGIGVADRLLMFEHSVYTVASPEACASILWRDAAKAPDAAAALKITGRDLLELGVVDEVLAEPSGGNNWAPLEAGQTLRAALERHLGELLTLSEQELRDARYTKFRAMGRFAEEMSQEFDDIA

Annotated regions:
phrase: QLESLASRRRQEIFQGLTPAQKIQVARHPHRPSTLDFIQMFCDDFVELHGDRRGNDDQALIGGVGRLGDRAVLLLGHQKGRDTKENVARNFGMATPGGYRKAMRLMEHADRFRLPILTFIDTPGAYAGLQAEEQGQGEAIAVNLRDMFGLRVPVIATVIGEGGSGGALGIGVADRLLMFEHSVYTVASPEACASILWRDAAKAPDAAAALKITGRDLLELGVVDEVLAEPSGGNNWAPLEAGQTLRAALERHLG
type: DOMAIN
name: COA_CT_C
description: Acetyl-coenzyme A carboxyltransferase, C-terminal
Protein sequence:
MERGTSKFSWIGLVARIYNYIPHPSIFSNAILGIAWLFLIFLCCSCLTKSSIFARLLRVKNETTTVDVGFFGVCDQAINSTSRVCHELRNWDQTTGGLAYETSRFAWLQVHPVLLAIVVVFSTLSIVLTILKYLAPAYIRQWSISCLTTSTAACLLLALQMALAHISANSYAVGMNLTGKATAKFGVAAAVFGWISSGFFLLFSLIHLGLWTIERNKQKLFEETSLSFSFITTKLRLIETQYFICKDY

Annotated regions:
Protein sequence:
MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRESLPLVIFLRNRLKYALTNSEVTKIVMQRLIKVDGKVRTDPNYPSGFMDVITIEKTGEFFRLIYDVKGRFTIHRITAEEAKYKLCKVKRVQTGPKGIPFLVTHDGRTIRYPDPIIKVNDTIQLEIANSKIMDSIKFDSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHTFANRLNNVFIIGKGSKAYVSLPRGKGVKLSIAEERDKRLAAKTH

Annotated regions:
phrase: RGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKL
type: DOMAIN
name: Ribosomal_eS4_N
description: Small ribosomal subunit protein eS4, N-terminal

phrase: TGEFFRLIYDVKGRFTIHRITAEEAKYKLCKVKRVQTGPKGIPFLVTHDGRTIRYPDPIIKVNDTIQLEIANSK
type: DOMAIN
name: Ribosomal_eS4_central_region
description: Small ribosomal subunit protein eS4, central region

phrase: LPLVIFLRNRLKYALTNSEVTKIVMQRLIKVDGKVRTDPNYPSGFMDVITIEKTGEFFRLIYDV
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: PLVIFLRNRLKYALTNSEVTKIVMQRLIKVDGKVRTDPNYPSGFMDV
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: GNLCMITGGRNLGRVGTVVNRERHPGSFDIVHI
type: DOMAIN
name: KOW
description: KOW

phrase: DSQGHTFANRLNNVFIIGKGSKAYVSLPRGKGVKLSIAEERDKRLAA
type: DOMAIN
name: Ribosomal_eS4_C
description: Small ribosomal subunit protein eS4, C-terminal domain

phrase: HLKRLNAPKAWMLD
type: CONSERVED_SITE
name: Ribosomal_eS4_N_CS
description: Small ribosomal subunit protein eS4, N-terminal, conserved site

phrase: FDSGNLCMITGGRNLGRVGTVVNRERHPGSFDIVHIKDSQGHTFANRLNNVFII
type: DOMAIN
name: Ribosomal_eS4_KOW
description: Small ribosomal subunit protein eS4, KOW domain
Protein sequence:
MIFERVVRPRLFRLGNGDAETAHEFTVRRLAGLARVPAALAVLRARYGVSAPRTVFGLRFPNPVGLAAGMDKNGVALPAWPALGFGFVEVGTVTAHPQPGNPRPRLFRLPDSRAVVNRMGFNNAGAGALAARLAALPRPLGVPLGISLGKSKVTPLEEAVEDYQASYQALRGYGDYFAVNVSSPNTPGLRALQDRAHLDALLAALVGEKPVLVKIAPDLPDSAIAELLEVCLARGAAGVIATNTTLARDGLAPADQAGGAEAGGLSGRPLAQRAREVVSFVHTETGGRLPVVGVGGILTPDDAERMFDAGASLVQLYTGFIYRGPALVRAAAAAARTP

Annotated regions:
phrase: GFVEVGTVTAHPQPGNPRP
type: CONSERVED_SITE
name: Dihydroorotate_DH_CS
description: Dihydroorotate dehydrogenase, conserved site

phrase: TVFGLRFPNPVGLAAGMDKNGVALPAWPALGFGFVEVGTVTAHPQPGNPRPRLFRLPDSRAVVNRMGFNNAGAGALAARLAALPRPLGVPLGISLGKSKVTPLEEAVEDYQASYQALRGYGDYFAVNVSSPNTPGLRALQDRAHLDALLAALVGEKPVLVKIAPDLPDSAIAELLEVCLARGAAGVIATNTTLARDGLAPADQAGGAEAGGLSGRPLAQRAREVVSFVHTETGGRLPVVGVGGILTPDDAERMFDAGASLVQLYTGFIYRGPAL
type: DOMAIN
name: Dihydroorotate_DH_cat
description: Dihydroorotate dehydrogenase, catalytic

phrase: VVGVGGILTPDDAERMFDAG
type: CONSERVED_SITE
name: Dihydroorotate_DH_CS
description: Dihydroorotate dehydrogenase, conserved site
Protein sequence:
MASSRQDYIAPWWTYWLHNFPHLNFNFQTVDNTFKPEDASYQQSLVFLACVSAVALGLCLLLLSVYLTCLCCCRREEDEEVKRPDTCCVTWAAVITGLVICSAVGVGFYGNSETNDGVYQLTYSIYNANHTLGGIGSMVGNSLGSMQVGLKEHLERLDEIFSPRGDYTQTLRFMQQMADNIIQQLTAMPETRKVQVDLAAIADRTAFIEYYRWLTYLLLLILDLVICLLACLALAKQSRWLLTVIMVCGMLTLIMSWASLGAGTATAVGTSDFCVSPDKYIVNQTKGTLSSDIVHYYLYCSQSLPNPFQQSLTIFQRSLTTMQIQVQGLLQFAVVVFPTAEKDLLGIQRLLNSSEFNLHQLTALLDCRSLHKDYLEALLGVCYDGVEGLLYLCLFSLLAACAFCALLCAVPRAWMLIAIRDRDYDDIDEEDPFNPTRRFNAYNPSRAQVHSFCSYSSSMGSQTSLQPPLQATSSTPEYMNQSMLFERNPRYENVPLIGSGSPPPSYSPSMRTTYLSMTDAQIRHFGTDFQV

Annotated regions:
Protein sequence:
MSVLPTPLANQLLIALPALSDPTFSRSVALICQHDENGAMGVLVNRPSEYTLGEVLSQMGIDTDDEPLREQVVLSGGPVHPERGFVIHDDAREWDSSLEVGQGVFLTTSRDILEAMAAGNGPRNALVALGCAGWGAGQLEFELGENSWLTAPSDANVLFATALEDRWQTAAGRIGVDLFRLTDYSGHA

Annotated regions:
Protein sequence:
MTTRNRIYLIGFSGAGKSAVGRSTARLLGWRFEDADERIVERAGKPVERVFAEDGEPAFRELERATIAEFAREEHVVVSTGAGSVMHDQSLGGMLSSGLVVALEARPETVYRRLSHIAELDGAEAMTRPMLQSDDPLGRIESLKRERQWAYAHAHWTVHTDDLSIEQAALEVVRAWRRLGAPSAWEDDPDFAATVRLEQGAYPVFVGWDSLEDQLGRRLAQMGLSGRAFIVCDSNVVHPYGRAAQRSLHAAGIEMGLFTFPAGEASKNLATATVLYEWLAERRAERRDAIVAVGGGVVGDLAGYVAATFLRGIRVVQVPTSLTAMVDSSIGGKTGVDLPVAKNMVGAFHHPAMVLTDVSALRTLPERALREGWAEAVKHGLALEAGLVDLYEEHADALQSLDPELTTRAVAWNAAVKARMVSADEREMSGLRQLLNYGHTIGHGLEAAAGYDAYLHGEAVAIGMTGAARLGMLEGVTPPELVERQASLIARFGLPSAYMGVEPEAILEAMSRDKKTTAGQISWVLLDGVGSSRTHRGIAPERVASVVRELGA

Annotated regions:
phrase: GWAEAVKHGLALEAGLVDLYEEHADALQSLDPELTTRAVAWNAAVKARMVSADEREMSGLRQLLNYGHTIGHGLEAAAGYDAYLHGEAVAIGMTGAARLGMLEGVTPPELVERQASLIARFGLPSAYMGVEPEAILEAMSRDKK
type: DOMAIN
name: DHQS_C
description: 3-dehydroquinate synthase, C-terminal domain

phrase: TFPAGEASKNLATATVLYEWLAERRAERRDAIVAVGGGVVGDLAGYVAATFLRGIRVVQVPTSLTAMVDSSIGGKTGVDLPVAKNMVGAFHHPAMVLTDVSALRTLPERAL
type: DOMAIN
name: DHQS/DOIS_N
description: 3-dehydroquinate synthase, N-terminal domain
Protein sequence:
MSMSSRHLHSSIVNPPPPEYINRKKTGRLTNQLQYLEKVVLKALWRHHFSWPFQQPVDAAKLNLPDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQDFNTMFTNCYIYNKPGDDIVVMSQELEKVFMEKIAEMPHEEIELSVVGNRGVKSRIKISAVAAEVCKKKMVSQKMHRRTFPCPVIAMMPKRTTLVPLSVIRSSTSSHSASSVSKVNKGIKRKADTTTPAVSLIATSCESSPTLSEPKPNKILSGTEKTRSAETSAVDLPDSQHHIHFIKSNQICEQLKHCNNILNEMMSKKHAEYAWPFYKTVIPTSLLDCSDAIKHPMDLATIRDKMENGLYKDTQDFASDVRLMFMNSYKYNPPDNEVVNMARKMQDVFEGMFAKIPDDPLATQSMVERYKTSTEESSSSSSSEQSSSSDSEDERAQHLALLQEQLRAVQEQLKALTETPIFSKIQPKSAVGVYDKYKQWVKCIEPMGKLLKRKKNYDAKKKKLHVSDEEEDVKPMSYDEKRQLSLDINKLPGEKLGRIVHIIQSREPSLKDSNPNEIEIDFETLKQSTLRHLEKYVMVCLRKRPKKPSSIKSLKSKEQLNKEKKQELEKRLRDVSGQLSSAKKPKIQGFLYPMQSIGGPSRLSESSTSSSASDVSNSSDSSSSDSSDSESATFPKNILAKKQTSTNYEVPLLLYYGCFVNKPRTSIPQNGLCIGSQSLAYTTISTIVHPTPMALMPLHPGSTNYTSLQLLLKYGLHVPLIIENPLGNSVLFENYLEVLHPSQIEQTFAIKEECLKPKYKNAKVKTSFCWEVFSKSLATTHVTIKSSSNSFQQFRKAAIAKEERERALKAQELRRLEDSKAGMQEKLSPSLPMETKVHEMQAQTIDEATKGEPTCNPVHEGITEEERNLARMREQERRRREAMAGTIDMYLQSDIMATFEEHLC

Annotated regions:
phrase: SWPFQQPVDAAKLNLPDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQDFNTMFTNCYI
type: CONSERVED_SITE
name: Bromodomain_CS
description: Bromodomain, conserved site

phrase: RLTNQLQYLEKVVLKALWRHHFSWPFQQPVDAAKLNLPDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQDFNTMFTNCYIYNKPGDDIVVMSQELEKVFMEKIAE
type: DOMAIN
name: Bromo_Brdt_I
description: Brdt, bromodomain, repeat I

phrase: KHAEYAWPFYKTVIPTSLLDCSDAIKHPMDLATIRDKMENGLYKDTQDFASDVRLMFMNSYKYNPPDNEV
type: DOMAIN
name: Bromodomain
description: Bromodomain

phrase: WRHHFSWPFQQPVDAAKLNLPDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQDFNTMFTNCYIYNKPGDDI
type: DOMAIN
name: Bromodomain
description: Bromodomain

phrase: VSDEEEDVKPMSYDEKRQLSLDINKLPGEKLGRIVHIIQSREPSLKDSNPNEIEIDFETLKQSTLRHLEKYVMVCLRKRPKK
type: DOMAIN
name: NET_dom
description: NET domain

phrase: TEEERNLARMREQERRRREAMAGTIDMYLQSDIMATFEEHL
type: DOMAIN
name: BRD4_CDT
description: Bromodomain protein 4, C-terminal

phrase: PMSYDEKRQLSLDINKLPGEKLGRIVHIIQSREPSLKDSNPNEIEIDFETLKQSTLRHLEKYV
type: DOMAIN
name: NET_dom
description: NET domain

phrase: HFSWPFQQPVDAA
type: DOMAIN
name: Bromodomain
description: Bromodomain

phrase: LPDYYQIIKNPMDLST
type: DOMAIN
name: Bromodomain
description: Bromodomain

phrase: IRDKMENGLYKDTQDFAS
type: DOMAIN
name: Bromodomain
description: Bromodomain

phrase: DVRLMFMNSYKYNPPDNEV
type: DOMAIN
name: Bromodomain
description: Bromodomain

phrase: ICEQLKHCNNILNEMMSKKHAEYAWPFYKTVIPTSLLDCSDAIKHPMDLATIRDKMENGLYKDTQDFASDVRLMFMNSYKYNPPDNEVVNMARKMQDVFEGMFAKIP
type: DOMAIN
name: Bromodomain
description: Bromodomain

phrase: TGRLTNQLQYLEKVVLKALWRHHFSWPFQQPVDAAKLNLPDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQDFNTMFTNCYIYNKPGDDIVVMSQELEKVFMEKIAEMP
type: DOMAIN
name: Bromodomain
description: Bromodomain

phrase: VLKALWRHHFSWPFQQPVDAAKLNLPDYYQIIKNPMDLSTIRKRLEYNYYSKALDCIQDFNTMFTNCYIYNKPGDDIVVM
type: DOMAIN
name: Bromodomain
description: Bromodomain

phrase: CNNILNEMMSKKHAEYAWPFYKTVIPTSLLDCSDAIKHPMDLATIRDKMENGLYKDTQDFASDVRLMFMNSYKYNPPDNEVVNMA
type: DOMAIN
name: Bromodomain
description: Bromodomain
Protein sequence:
MADSAVRVRIAPSPTGEPHVGTAYIALFNYLFAKKHGGEFILRIEDTDATRSTPEFEKKVLDALKWCGLEWSEGPDIGGPCGPYRQSDRKDIYKPYVEQIVANGHGFRCFCTPERLEQMREAQRAAGKPPKYDGLCLSLSAEEVTSRVAAGEPHVVRMKIPTEGSCKFRDGVYGDVEIPWEAVDMQVLLKADGMPTYHMANVVDDHLMKITHVARGEEWLASVPKHILIYQYLGLEPPVFMHLSLMRNADKSKLSKRKNPTSISYYTALGYLPEALMNFLGLFFIQIAEGEELLTMAELAEKFDPENLSKAGAIFDIQKLDWLNARWIREKLSEEQFAAKVLSWAMDNDRLREGLKLSQTRISKLGELPDLAAFLFKSDLGLQPAAFAGVKASPEEMLEILNTVQPDLEKILEWNKESIETELRACAERMGKKLKAVVAPLFVAVSGSQRSLPLFDSMELLGRSVVRQRLKVAAQVVASMAGSGK

Annotated regions:
phrase: QFAAKVLSWAMDNDRLREGLKLSQTRISKLGELPDLAAFLFKSDLGLQPAAFAGVKASPEEMLEILNTVQPDLEKILEWNKESIETELRACAERMGKKLKAVVAPLFVAVSGSQRSLPLFDSMELLGRSVVRQRLKV
type: DOMAIN
name: aa-tRNA-synth_I_cd-bd
description: Aminoacyl-tRNA synthetase, class I, anticodon-binding

phrase: AVRVRIAPSPTGEPHVGTAYIALFNYLFAKKHGGEFILRIEDTDATRSTPEFEKKVLDALKWCGLEWSEGPDIGGPCGPYRQSDRKDIYKPYVEQIVANGHGFRCFCTPERLEQMREAQRAAGKPPKYDGLCLSLSAEEVTSRVAAGEPHVVRMKIPTEGSCKFRDGVYGDVEIPWEAVDMQVLLKADGMPTYHMANVVDDHLMKITHVARGEEWLASVPKHILIYQYLGLEPPVFMHLSLMRNADKSKLSKRKNPTSISYYTALGYLPEALMNFLGLFFIQIAEGEELLTMAELAEKFDPENLSKAGAIFDIQKLDWLNARWIR
type: DOMAIN
name: GluRS_core
description: Glutamyl-tRNA synthetase

phrase: PSPTGEPHVGT
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: VRVRIAPSPTGEPHVGTAYIALFNYLFAKKHGGEFILRIEDTDATRSTPEFEKKVLDALKWCGLEWSEGPDIGGPCGPYRQSDRKDIYKPYVEQIVANGHGFRCFCTPERLEQMREAQRAAGKPPKYDGLCLSLSAEEVTSRVAAGEPHVVRMKIPTEGSCKFRDGVYGDVEIPWEAVDMQVLLKADGMPTYHMANVVDDHLMKITHVARGEEWLASVPKHILIYQYLGLEPPVFMHLSLMRNADKSKLSKRKNPTSISYYTALGYLPEALMNFLGLFFIQIAEGEELLTMAELAEKFDPENLSKAGAIFDIQKLD
type: DOMAIN
name: Glu/Gln-tRNA-synth_Ib_cat-dom
description: Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain
Protein sequence:
MKNKLVLIDGNSVAYRAFFALPLLHNDKGIHTNAVYGFTMMLNKILAEEQPTHILVAFDAGKTTFRHETFQDYKGGRQQTPPELSEQFPLLRELLKAYRIPAYELDHYEADDIIGTMAARAEREGFAVKVISGDRDLTQLASPQVTVEITKKGITDIESYTPETVVEKYGLTPEQIVDLKGLMGDKSDNIPGVPGIGEKTAVKLLKQFGTVENVLASIDEIKGEKLKENLRQYRDLALLSKQLAAICRDAPVELTLDDIVYKGEDREKVVALFQELGFQSFLDKMAVQTDEGEKPLAGMDFAIADSVTDEMLADKAALVVEVVGDNYHHAPIVGIALANERGRFFLRPETALADPKFLAWLGDETKKKTMFDSKRAAVALKWKGIELRGVVFDLLLAAYLLDPAQAAGDVAAVAKMHQYEAVRSDEAVYGKGAKRTVPDEPTLAEHLVRKAAAIWALEEPLMDELRRNEQDRLLTELEQPLAGILANMEFTGVKVDTKRLEQMGAELTEQLQAVERRIYELAGQEFNINSPKQLGTVLFDKLQLPVLKKTKTGYSTSADVLEKLAPHHEIVEHILHYRQLGKLQSTYIEGLLKVVHPVTGKVHTMFNQALTQTGRLSSVEPNLQNIPIRLEEGRKIRQAFVPSEPDWLIFAADYSQIELRVLAHIAEDDNLIEAFRRGLDIHTKTAMDIFHVSEEDVTANMRRQAKAVNFGIVYGISDYGLAQNLNITRKEAAEFIERYFASFPGVKQYMDNIVQEAKQKGYVTTLLH

Annotated regions:
phrase: RRQAKAVNFGIVYGISDYG
type: CONSERVED_SITE
name: DNA-dir_DNA_pol_A_CS
description: DNA-directed DNA polymerase, family A, conserved site

phrase: NKLVLIDGNSVAYRAFFALPLLHNDKGIHTNAVYGFTMMLNKILAEEQPTHILVAFDAGKTTFRHETFQDYKGGRQQTPPELSEQFPLLRELLKAYRIPAYELDHYEADDIIGTMAARAEREGFAVKVISGDRDLTQLASPQVTVEITKKGITDIESYTPETVVEKYGLTPEQIVDLKGLMGDKSDNIPGVPGIGEKTAVKLLKQFGTVENVLASIDEIKGEKLKENLRQYRDLALLSKQLAAICRDAPVELTLDDIVY
type: DOMAIN
name: 5-3_exonuclease
description: 5'-3' exonuclease

phrase: PEQIVDLKGLMGDKSDNIPGVPGIGEKTAVKLLKQ
type: CONSERVED_SITE
name: HhH2
description: Helix-hairpin-helix motif, class 2

phrase: KLVLIDGNSVAYRAFFALPLLHNDKGIHTNAVYGFTMMLNKILAEEQPTHILVAFDAGKTTFRHETFQDYKGGRQQTPPELSEQFPLLRELLKAYRIPAYELDHYEADDIIGTMAARAEREGFAVKVISGDRDLTQLASPQVTVEITKKGITDIESYTPETVVEKY
type: DOMAIN
name: 5-3_exonucl_a-hlix_arch_N
description: 5'-3' exonuclease, alpha-helical arch, N-terminal

phrase: GRKIRQAFVPSEPDWLIFAADYSQIELRVLAHIAEDDNLIEAFRRGLDIHTKTAMDIFHVSEEDVTANMRRQAKAVNFGIVYGISDYGLAQNLNITRKEAAEFIERYFASFPGVKQYMDNIVQEAKQKGYVTTLL
type: DOMAIN
name: DNA-dir_DNA_pol_A_palm_dom
description: DNA-directed DNA polymerase, family A, palm domain

phrase: KRLEQMGAELTEQLQAVERRIYELAGQEFNINSPKQLGTVLFDKLQLPVLKKTKTGYSTSADVLEKLAPHHEIVEHILHYRQLGKLQSTYIEGLLKVVHPVTGKVHTMFNQALTQTGRLSSVEPNLQNIPIRLEEGRKIRQAFVPSEPDWLIFAADYSQIELRVLAHIAEDDNLIEAFRRGLDIHTKTAMDIFHVSEEDVTANMRRQAKAVNFGIVYGISDYGLAQNLNITRKEAAEFIERYFASFPGVKQYMDNIVQEAKQKGYVTTL
type: DOMAIN
name: DNA-dir_DNA_pol_A_palm_dom
description: DNA-directed DNA polymerase, family A, palm domain

phrase: LVVEVVGDNYHHAPIVGIALANERGRFFLRPETALADPKFLAWLGDETKKKTMFDSKRAAVALKWKGIELRGVVFDLLLAAYLLDPAQAAGDVAAVAKMHQYEAVRSDEAVYGKGAKRTVPDEPTLAEHLVRKAAAIWA
type: DOMAIN
name: DNA_polI_exonuclease
description: DNA polymerase I, 3'-5' exonuclease domain

phrase: PEQIVDLKGLMGDKSDNIPGVPGIGEKTAVKLLKQFGTVENVLASIDEIKGEKLKENLRQYRDLALLSKQLAA
type: DOMAIN
name: DNA_polI_H3TH
description: DNA polymerase I-like, H3TH domain

phrase: TPEQIVDLKGLMGDKSDNIPGVPGIGEKTAVKLLKQFGTVENVLASIDEIKGEKLKENLRQYRDLALLSKQLAAICRDAPVELTLDDIVYKGED
type: DOMAIN
name: DNA_polI_H3TH
description: DNA polymerase I-like, H3TH domain

phrase: DFAIADSVTDEMLADKAALVVEVVGDNYHHAPIVGIALANERGRFFLRPETALADPKFLAWLGDETKKKTMFDSKRAAVALKWKGIELRGVVFDLLLAAYLLDPAQAAGDVAAVAKMHQYEAVRSDEAVYGKGAKRTVPDEPTLAEHLVRKAAAIWALEEPLMDEL
type: DOMAIN
name: 3'-5'_exonuclease_dom
description: 3'-5' exonuclease domain
Protein sequence:
MFARLPLYLRLVRMDKPIGSLLLLWPTLNALWIASDGHPSVSLLVIFALGTILMRSAGCAINDYADRDFDRYVKRTENRPITSGKIKAWEAVALAAGLSLVAFLLILPLNALTKELSVAALFVAGTYPFTKRFFAIPQAYLGIAFGFGIPMAFAAVQNQVPLLAWVMLIANVFWSVAYDTEYAMVDRDDDIKIGIRTSALTFGRFDVLAIMLCYAVTLGIYVGIGFTLGFGVLYWIGLAAAAGCAVYHYTLIKGRERMPCFAAFRHNNWLGGALFAGIAAHYAAQAF

Annotated regions:
phrase: NDYADRDFDRYVKRTENRPITS
type: CONSERVED_SITE
name: UbiA_prenylTrfase_CS
description: UbiA prenyltransferase conserved site
Protein sequence:
MKVNLLDFDRAALERFFASIDEKPWRARQVLRWIHQRGAADFDAMTDVAKSLRARLAETAEIRLPELAGDAVAADDTRKWLLKVDAANSVESVFIPEKGRGTLCMSSQAGCVLDCAFCSTGKQGFNRNLSSGEMVAQLWIANRALGRKQGAERPITNVVMMGMGEPLLNLDALIPALRLMLDDDAYGLSRRRVTVSTSGIIPGMDRLAEECPVALAVSLHAPDDELRERLVPVNRKYPIRDLLAACRRYLERAPRDFITFEYVMLDGVNDRDAQARELLRIAARVRCKFNLIPFNPFPGSSFRRSSPERIRAFAAVLQRAGLTVTTRKTRGDAIDAACGQLAGDVTDRTRRTARPARIPIVELNA

Annotated regions:
phrase: VNLLDFDRAALERFFASIDEKPWRARQVLRWIHQRGAADFDAMTDVAKSLRARLAETAE
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: EKGRGTLCMSSQAGCVLDCAFCSTGKQGFNRNLSSGEMVAQLWIANRALGRKQGAERPITNVVMMGMGEPLLNLDALIPALRLMLDDDAYGLSRRRVTVSTSGIIPGMDRLAEECPVALAVSLHAPDDELRERLVPVNRKYPIRDLLAACRRYLERAPRDFITFEYVMLDGVNDRDAQARELLRIAARVRCKFNLIPFNPFPGSSFRRSSPERIRAFAAVLQRAGLTVTTRKTRGD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SSQAGCVLDCAFCSTGKQGFNRNLSSGEMVAQLWIANRALGRKQGAERPITNVVMMGMGEPLLNLDALIPALRLMLDDDAYGLSRRRVTVSTSGIIPGMDRLAEECPVALAVSLHAPDDELRERLVPVNRKYPIRDLLAACRRYLERAPRDFITFEYVMLDGVNDRDAQ
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MALYEHIFIVRPDVSPAQMESLLEETKALIEEKGGKTGKIEYWGLRNLSYRINKSRKGHYGLIDIDAEADVINELERLQRLSEDVIRHMTLRVEAHTEEPSAILTKKDDRRGRRERN

Annotated regions:
phrase: GLRNLSYRI
type: CONSERVED_SITE
name: Ribosomal_bS6_CS
description: Small ribosomal subunit protein bS6, conserved site
Protein sequence:
MGQKRQRDQKGSGFQSKKRKRGANSSNADDKDDGWDGIVGVEDLNWKEVALPDRLDDAEGFFGLEEIEGVDIVRPEGSGEIRFKAKAGKPKKSILKNKTIPQEDKTFDDEWEGFSDGEAAQETTTTEPTEEPVQTTNEETEVKEKKEPKKKEAKKEVKKDAKNAKKEPKKKDLPSQKDKDIKPGLSFAALQDAEEDDGVDISAWESLGLSPEILNSLSKLKFSSPTAVQKSCIPPILDGHDVVGKASTGSGKTLAFGIPILEYYLEKKRRETKNKDDKKETSPIALILSPTRELAHQLVKHIGEVITHAPGVNARIALLTGGLSVQKQQRLLNGADIVIGTPGRVWEVLSGGQGLISKMKEIKYLVVDEADRLLSEGHFKEAHEILAALDREEINDFPGAEEDESDDEDSKTQRQTLVFSATFHRDLQQKLAGKGKWTGSDLMNKQESMEYLLKKLNFREEKPKFIDVNPVSQMAEGLKEGIVECAAMEKDLYLYTLLLYHPKHRTLVFTNSISAVRRLTQFLQALQLPALALHSSMAQKARLRSVERFSSPTADPSTILVATDVAARGLDIKGIDFVIHYHAPRTADTYVHRSGRTARAGASGKSVIICAPEEMVGVVRLAAKVHANMANGKRLPLESLELDRRIVSRVKQRVTLAARICDANIAKEKVSAEDNWLKNAAEELGVDYDSEEFDERQGRGRGRGRGRQQRERQASSISKAELAGMRAELKQLLSQRVNVGVSERYLTSGRVDIEALLRGEGNASFLGQVDPLGF

Annotated regions:
phrase: VVDEADRL
type: CONSERVED_SITE
name: RNA-helicase_DEAD-box_CS
description: ATP-dependent RNA helicase DEAD-box, conserved site

phrase: RRLTQFLQALQLPALALHSSMAQKARLRSVERFSSPTADPSTILVATDVAARGLDIKGIDFVIHYHAPRTADTYVHRSGRTARA
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: LYLYTLLLYHPKHRTLVFTNSISAVRRLTQFLQALQLPALALHSSMAQKARLRSVERFSSPTADPSTILVATDVAARGLDIKGIDFVIHYHAPRTADTYVHRSGRTARA
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: SAWESLGLSPEILNSLSKLKFSSPTAVQ
type: DOMAIN
name: RNA_helicase_DEAD_Q_motif
description: RNA helicase, DEAD-box type, Q motif

phrase: IPPILDGHDVVGKASTGSGKTLAFGIPILEYYLEKKRRETKNKDDKKETSPIALILSPTRELAHQLVKHIGEVITHAPGVNARIALLTGGLSVQKQQRLLNGADIVIGTPGRVWEVLSGGQGLISKMKEIKYLVVDEADRLLSEGHFKEAHEILAALDREEINDFPGAEEDESDDEDSKTQRQTLVFSATFHRDLQQKLAGKGKWTGS
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: TAVQKSCIPPILDGHDVVGKASTGSGKTLAFGIPILEYYLEKKRRETKNKDDKKETSPIALILSPTRELAHQLVKHIGEVITHAPGVNARIALLTGGLSVQKQQRLLNGADIVIGTPGRVWEVLSGGQGLISKMKEIKYLVVDEADRLLSEGHFKEAHEILAALDREEINDFPGAEEDESDDEDSKTQRQTLVFSATFHRDL
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: KFSSPTAVQKSCIPPILDGHDVVGKASTGSGKTLAFGIPILEYYLEKKRRETKNKDDKKETSPIALILSPTRELAHQLVKHIGEVITHAPGVNARIALLTGGLSVQKQQRLLNGADIVIGTPGRVWEVLSGGQGLISKMKEIKYLVVDEADRLLSEGHFKEAHEILAALDREEINDFPGAEEDESDDEDSKTQRQTLVFSATFHRDLQQKLAGKGKWTGSDLMNKQESMEY
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: YLYTLLLYHPKHRTLVFTNSISAVRRLTQFLQALQLPALALHSSMAQKARLRSVERFSSPTADPSTILVATDVAARGLDIKGIDFVIHYHAPRTADTYVHRSGRTARAGASGKSVIICAPEEMVGVVRLAAKVHANMANGKRLPLESLEL
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like