nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MVKQIESKYAFQEALNSAGEKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVVFLEVDVDDCQDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATINELI

Annotated regions:
phrase: VVDFSATWCGPCKMIKPF
type: CONSERVED_SITE
name: Thioredoxin_CS
description: Thioredoxin, conserved site

phrase: SKYAFQEALNSAGEKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVVFLEVDVDDCQDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATI
type: DOMAIN
name: Thioredoxin_domain
description: Thioredoxin domain

phrase: MVKQIESKYAFQEALNSAGEKLVVVDFSATWCGPCKMIKPFFHSLSEKYSNVVFLEVDVDDCQDVASECEVKCMPTFQFFKKGQKVGEFSGANKEKLEATINEL
type: DOMAIN
name: Thioredoxin_domain
description: Thioredoxin domain
Protein sequence:
MTSLATDHADYCPELDAITEKRRMALSYRMSEQSAIPEHALQGTFNRLVSPNQSGLQTESVSKEMKQIIEEQGNTLHWAALVILVVIIPTIGGNILVILAVSLEKKLQYATNYFLMSLAVADLLVGLFVMPIALLTIMFEAIWPLPLVLCPAWLFLDVLFSTASIMHLCAISVDRYIAIKKPIQANQYNSGATAFIKITVVWLISIGIAIPIPIKGIETNVENPNNVTCELTKQRFGNFRLFGSLAAFFTPLAIMIVTYFLTIHALQKKAYVVRNKPPQRLTWLTVSTVFQKDDTPCSSPEKVAMLDASRQDKSVSNSGDEILMRRMSTVGKKSVQTISNEQRASKVLGIVFFLFLLMWCPFFITNITLVLCDSCNQATLQMLLEVFVWIGYISSGVNPLVYTLFNKTFRDAFGRYITCNYQATKSVKTPRRCSSNIHFRNPMAENSRFFMKHGIRNGINPAMYQSPMRLRSSTIQSSSIILLDTLLLTENEGGKTEEQVSYV

Annotated regions:
phrase: GNILVILAVSLEKKLQYATNYFLMSLAVADLLVGLFVMPIALLTIMFEAIWPLPLVLCPAWLFLDVLFSTASIMHLCAISVDRYIAIKKPIQANQYNSGATAFIKITVVWLISIGIAIPIPIKGIETNVENPNNVTCELTKQRFGNFRLFGSLAAFFTPLAIMIVTYFLTIHALQKKAYVVRNKPPQRLTWLTVSTVFQKDDTPCSSPEKVAMLDASRQDKSVSNSGDEILMRRMSTVGKKSVQTISNEQRASKVLGIVFFLFLLMWCPFFITNITLVLCDSCNQATLQMLLEVFVWIGYISSGVNPLV
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM
Protein sequence:
MPKNSSTTVSSAVEAHAGGLASGPGGARSGERDRIVVQGAREHNLKDVDVSFPRDAMVVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSSYARMFLGRVDKPDVDFIEGLSPAVSIDQKSTNRNPRSTVGTITEIYDYMRLLWARVGVPHCPQCGEPVSRQTPQQIVDQLEELPERTRFQVLAPVVRGRKGEFVDLFRDLSTQGFAVVDGETVQLSDPPVLKKQVKHTIAVVVDRLAMKEGIRQRLTDSVETALKLADGLVVAEFVDVEPVAEKGKKNTAEFGGRDAEGNPRYRSFSEKLSCPNGHEQTVDEIEPRSFSFNNPFGACPECTGIGSRLQVDPDLVVANDELSLREGAVVPWSLGKSTSDYWLRVLGGLGKEMGFSLDTPWKDLTEAERDAVLHGKDFKVEVTFRNRFGRERRYTTGFEGVIPYVMRKHGETESDGARERYESFMREIPCPACHGARLNPTVLNVLVGGLSIADATRLPMREAMEFFSGLRLTDRERQIADQVLKEILARLAFLLDVGLEYLNLERPAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNRRLIETLLRLRDLGNTLIVVEHDEDTIAEADWIVDIGPRAGEYGGEVVHSGSLADLKANTRSVTGDYLSGRRSIAVPERRRVPEKGRVLTVRGAQENNLKDVSVQVPLGVLTAVTGVSGSGKSTLINEILYKVLANRLNGAKLVPGRHRSVEGLEHLDKVVHVDQSPIGRTPRSNPATYTGVFDAIRKLFAETPEAKVRGYQQGRFSFNIKGGRCEACAGDGTLKIEMNFLPDVYVPCEVCHGARYNRETLEVTYKGKNIAEVLDMPIEEAADFFSAYTRISRYLDTLVDVGLGYVRLGQPATTLSGGEAQRVKLAAELQKRSNGRTIYVLDEPTTGLHFDDIRKLLHVLQSLVDKGNTVLTIEHNLDVIKSADHVIDLGPEGGSGGGTIVATGTPEEVARAAESHTGRFLAELLA

Annotated regions:
phrase: LSGGEAQRVKLAAE
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: RRVPEKGRVLTVRGAQENNLKDVSVQVPLGVLTAVTGVSGSGKSTLINEILYKVLANRLNGAKLVPGRHRSVEGLEHLDKVVHVDQSPIGRTPRSNPATYTGVFDAIRKLFAETPEAKVRGYQQGRFSFNIKGGRCEACAGDGTLKIEMNFLPDVYVPCEVCHGARYNRETLEVTYKGKNIAEVLDMPIEEAADFFSAYTRISRYLDTLVDVGLGYVRLGQPATTLSGGEAQRVKLAAELQKRSNGRTIYVLDEPTTGLHFDDIRKLLHVLQSLVDKGNTVLTIEHNLDVIKSADHVIDLGPEGGSGGGTIVATGTPEEVARAAESHTGRFL
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: DPDLVVANDELSLREGAVVPWSLGKSTSDYWLRVLGGLGKEMGFSLDTPWKDLTEAERDAVLHGKDFKVEVTFRNRFGRERRYTTGFEGVIPYVMRKHGETESDGARERY
type: DOMAIN
name: UvrA_DNA-bd
description: UvrA DNA-binding domain

phrase: LSGGEAQRIRLATQ
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: LGVLTAVTGVSGSGKSTLINEILYKVLANRLNGAKLVPGRHRSVEGLEHLDKVVHVDQSPIGRTPRSNPATYTGVFDAIRKLFAETPEAKVRGYQQGRFSFNIKGGRCEACAGDGTLKIEMNFLPDVYVPCEVCHGARYNRETLEVTYKGKNIAEVLDMPIEEAADFFSAYTRISRYLDTLVDVGLGYVRLGQPATTLSGGEAQRVKLAAELQKRSNGRTIYVLDEPTTGLHFDDIRKLLHVLQSLVDKGNTVLTIEHNLDVIKSADHVIDLGPEGGSGGGTIVATGTPEEVARAAESHTGRFLA
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: QTPQQIVDQLEELPERTRFQVLAPVVRGRKGEFVDLFRDLSTQGFAVVDGETVQLSDPPVLKKQVKHTIAVVVDRLAMKEGIRQRLTDSVETALKLADGLVVAEF
type: DOMAIN
name: UvrA_inter
description: UvrA, interaction domain
Protein sequence:
MMFSSIDSLLKISTSSQNEDQKLESHPSPPSQIPNYSTSCSEELMKMAAKAAQFAAQASLENSFSSSTSPTSTVTPLSAYTSLVQPVLPLIYDHLALTYSVNAWQAWGKMRRPRTAFSSEQLVQLEKQFSDNRYLSRPRRYQLAQQLSLSETQIKIWFQNRRMKNKRCPSSTPIQSTSSS

Annotated regions:
phrase: LAQQLSLSETQIKIWFQNRRMKN
type: CONSERVED_SITE
name: Homeobox_CS
description: Homeobox, conserved site

phrase: NRYLSRPRRYQ
type: DOMAIN
name: HD_metazoa
description: Homeodomain, metazoa

phrase: LSLSETQIKI
type: DOMAIN
name: HD_metazoa
description: Homeodomain, metazoa

phrase: WFQNRRMKN
type: DOMAIN
name: HD_metazoa
description: Homeodomain, metazoa

phrase: GKMRRPRTAFSSEQLVQLEKQFSDNRYLSRPRRYQLAQQLSLSETQIKIWFQNRRMKNKR
type: DOMAIN
name: HD
description: Homeodomain

phrase: RRPRTAFSSEQLVQLEKQFSDNRYLSRPRRYQLAQQLSLSETQIKIWFQNRRMKNK
type: DOMAIN
name: HD
description: Homeodomain

phrase: MRRPRTAFSSEQLVQLEKQFSDNRYLSRPRRYQLAQQLSLSETQIKIWFQNRRMKNKRCPSS
type: DOMAIN
name: HD
description: Homeodomain

phrase: RRPRTAFSSEQLVQLEKQFSDNRYLSRPRRYQLAQQLSLSETQIKIWFQNRRMKNK
type: DOMAIN
name: HD
description: Homeodomain
Protein sequence:
MTWKDRLPAVRGKLLRDEPLAPFTWFRVGGPADVIFLPEDEDDLAAFLKALPAEVPVTVLGVGSNTLVRDGGVDGVVIRLGKAFAKVEPRGEGRLYAGAAALDAVVAREAGKAGIAGLEFYRGVPGTIGGALVMNAGCYGAETKDVLVEAYALTRAGERLTLSNADLGYSYRKSARAAAEPLIFLGALFEGRPDDPAAIEARMAEITERREKTQPIREKTGGSTFKNPPGHSSWKLVDEAGWRGKLFGGAMFSPLHSNFLINTGEATAADLEGLGEAVRADVKAKFGVDLDWEIKRIGRP

Annotated regions:
phrase: RVGGPADVIFLPEDEDDLAAFLKALPAEVPVTVLGVGSNTLVRDGGVDGVVIRLGKAFAKVEPRGEGRLYAGAAALDAVVAREAGKAGIAGLEFYRGVPGTIGGALVMNAGCYGAETKDVLVEAYALTRAGERLTLSNADLGYSYRKSARAAAEPLIFLGALFEGRPDDPAAIEARMAEITERREKTQP
type: DOMAIN
name: FAD-bd_PCMH
description: FAD-binding domain, PCMH-type

phrase: DVIFLPEDEDDLAAFLKALPAEVPVTVLGVGSNTLVRDGGVDGVVIRLGKAFAKVEPRGEGRLYAGAAALDAVVAREAGKAGIAGLEFYRGVPGTIGGALVMNAGCYGAETKDVLVEAYALTRAGERLT
type: DOMAIN
name: Oxid_FAD_bind_N
description: FAD linked oxidase, N-terminal

phrase: IEARMAEITERREKTQPIREKTGGSTFKNPPGHSSWKLVDEAGWRGKLFGGAMFSPLHSNFLINTGEATAADLEGLGEAVRADVKAKFGVDLDWEIKR
type: DOMAIN
name: MurB_C
description: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal
Protein sequence:
MSDAGGGKKPPVEPQAGPGPGRAAGERGLSGSFPLVLKKLMENPPRETRLDKEKGKEKLEEDESAAASTMAVSASLMPPIWDKTIPYDGESFHLEYMDLDEFLLENGIPASPTHLAQNLLLPVAELEGKESASSSTASPPSSSTAIFQPSETVSSTESSLEKERETPSPIDPSCVEVDVNFNPDPADLVLSSVPGGELFNPRKHRFAEEDLKPQPMIKKAKKVFVPDEQKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEVGKCKTIVSKYETKYGPL

Annotated regions:
phrase: KDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRK
type: DOMAIN
name: bZIP
description: Basic-leucine zipper domain

phrase: QKDEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEVGKCKTIVS
type: DOMAIN
name: bZIP
description: Basic-leucine zipper domain

phrase: DEKYWTRRKKNNVAAKRSRDARRLKENQITIRAAFLEKENTALRTEVAELRKEVGKCKTIVSK
type: DOMAIN
name: bZIP
description: Basic-leucine zipper domain
Protein sequence:
MVIILLLVFFVGSSVSQPCHPNDLSALRELAGALKNKSVTESWLNGSRCCEWDGVFCEGSDVSGRVTKLVLPEKGLEGVISKSLGELTELRVLDLSRNQLKGEVPAEISKLEQLQVLDLSHNLLSGSVLGVVSGLKLIQSLNISSNSLSGKLSDVGVFPGLVMLNVSNNLFEGEIHPELCSSSGGIQVLDLSMNRLVGNLDGLYNCSKSIQQLHIDSNRLTGQLPDYLYSIRELEQLSLSGNYLSGELSKNLSNLSGLKSLLISENRFSDVIPDVFGNLTQLEHLDVSSNKFSGRFPPSLSQCSKLRVLDLRNNSLSGSINLNFTGFTDLCVLDLASNHFSGPLPDSLGHCPKMKILSLAKNEFRGKIPDTFKNLQSLLFLSLSNNSFVDFSETMNVLQHCRNLSTLILSKNFIGEEIPNNVTGFDNLAILALGNCGLRGQIPSWLLNCKKLEVLDLSWNHFYGTIPHWIGKMESLFYIDFSNNTLTGAIPVAITELKNLIRLNGTASQMTDSSGIPLYVKRNKSSNGLPYNQVSRFPPSIYLNNNRLNGTILPEIGRLKELHMLDLSRNNFTGTIPDSISGLDNLEVLDLSYNHLYGSIPLSFQSLTFLSRFSVAYNRLTGAIPSGGQFYSFPHSSFEGNLGLCRAIDSPCDVLMSNMLNPKGSSRRNNNGGKFGRSSIVVLTISLAIGITLLLSVILLRISRKDVDDRINDVDEETISGVSKALGPSKIVLFHSCGCKDLSVEELLKSTNNFSQANIIGCGGFGLV

Annotated regions:
phrase: GLKSLLISENRFSDVIPDVFGNLTQLEHLDVSSNKFSGRFPPSLSQCSKLRVLDLRNNS
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: ELHMLDLSRNNFTGTIPDSISGLDNLEVLDLSYNHLYGSIPLSFQSLTFLSRFSVAYNR
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: RVTKLVLPEKGLEGVISKSLGELTELRVLDLSRNQLKGEVPAEISKLEQLQVLDLSHNL
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: HPNDLSALRELAGALKNKSVTESWLNGSRCCEWDGVF
type: DOMAIN
name: LRR_N_plant-typ
description: Leucine-rich repeat-containing N-terminal, plant-type

phrase: LEQLSLSGNYLSGELSKNLSN
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: LCVLDLASNHFSGPLPDSLGH
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: KLEVLDLSWNHFYGTIPHWIGK
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: NLEVLDLSYNHLYGSIPLSFQ
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: LDNLEVLDLSYNHLYGSIPLSFQ
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LEQLQVLDLSHNLLSGSVLGVVS
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LQSLLFLSLSNNSFVDFSETMNV
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: FTDLCVLDLASNHFSGPLPDSLGH
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LKELHMLDLSRNNFTGTIPDSIS
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LTQLEHLDVSSNKFSGRFPPSLSQ
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: FPGLVMLNVSNNLFEGEIHPELCS
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LTELRVLDLSRNQLKGEVPAEIS
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LSGLKSLLISENRFSDVIPDVFG
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype
Protein sequence:
MTHLSKEAVIVRSALEAKGLETPMQHSSLSAQEKKQQIEQHMTSIMTLLGLDLADDSLAETPHRIAKMYVDEIFSGLDYGSFPKITLIENKMGTDEMIKVQDIGLTSTCEHHFVTIDGKATVAYIPKDKIIGLSKINRIVNFFAKRPQVQERLTQQILVALQVLLGTDNVAITVTATHYCVKSRGVMDASSQTTTTALGGVFKSSAATRHEFLSRA

Annotated regions:
phrase: AKRPQVQERL
type: CONSERVED_SITE
name: GTP_CycHdrlase_I_CS
description: GTP cyclohydrolase I, conserved site

phrase: IEQHMTSIMTLLGLDLADDSLAETPHRIAKMYVDEIFSGLDYGSFPKITLIENKMGTDEMIKVQDIGLTSTCEHHFVTIDGKATVAYIPKDKIIGLSKINRIVNFFAKRPQVQERLTQQILVALQVLLGTDNVAITVTATHYCVKSRGVMDASSQTTTTALGGVFKSSAATRHEFL
type: DOMAIN
name: GTP_CycHdrlase_I_dom
description: GTP cyclohydrolase I domain

phrase: EMIKVQDIGLTSTCEH
type: CONSERVED_SITE
name: GTP_CycHdrlase_I_CS
description: GTP cyclohydrolase I, conserved site
Protein sequence:
MGDNPFQPKSNSKMAELFMECEEEELEPWQKKVKEVEDDDDDEPIFVGEISSSKPAISNILNRVNPSSYSRGLKNGALSRGITAAFKPTSQHYTNPTSNPVPASPINFHPESRSSDSSVIVQPFSKPGYITNSSRVVSNKSSELLFDLTQDTGLSHYQGGPTLSMAGMSESSFLSKRPSTSEVNNVNPKKPKPSESVSGANSSAVLPSVKSPSVTSSQAMLAKGTNTSSNQSKNGTPFPRACPKCNIHFNLLDPLKNHMKYCCPDMINNFLGLAKTEFSSTVNKNTTIDSEKGKLIMLVNDFYYGKHEGDVQEEQKTHTTFKCFSCLKILKNNIRFMNHMKHHLELEKQSSESWENHTTCQHCYRQFPTPFQLQCHIESTHTPHEFSTICKICELSFETEHVLLQHMKDNHKPGEMPYVCQVCNYRSSSFSDVETHFRTSHENTKNLLCPFCLKVIKIATPYMHHYMKHQKKGIHRCTKCRLQFLTCKEKMDHKTQHHRTFIKPKQLEGLPPGTKVTIRASVGPLQSGASPTPSISASASTLQLSPPRTKNITAKNPAKSNTSKPNTVKSNASKPNTSKPNGSKSKYKPKISNMQKKQSTLASSNKKSKVNTALRNLRYRRGIHKCIECCSEIKDFANHFPTYVHCSFCRYNTSCSKAYVNHMMSFHSNRPSKRFCIFKKHSENLRGITLVCLNCDFLSDVSGLDNMATHLSQHKTHTCQVVMQKVSVCIPTSEHLSELKKEAPAKEQEPVSKEIARPNMAERETETS

Annotated regions:
phrase: YVCQVCNYRSSSFSDVETHFRTSHENTK
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: TTCQHCYRQFPTPFQLQCHIESTHTPHE
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: YVCQVCNYRSSSFSDVETHFRTS
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: VHCSFCRYNTSCSKAYVNHMMSF
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: FKCFSCLKILKNNIRFMNHMKH
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: LLCPFCLKVIKIATPYMHHYMK
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: HRCTKCRLQFLTCKEKMDHKTQ
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: RACPKCNIHFNLLDPLKNHM
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: TICKICELSFETEHVLLQHMKDN
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: LVCLNCDFLSDVSGLDNMATHLSQ
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: TTCQHCYRQFPTPFQLQCHIEST
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: CQHCYRQFPTPFQLQCHIEST
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: CFSCLKILKNNIRFMNHMKH
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: IFVGEISSSKPAISNILNRVNPSSYSRGLKNGALSRGITAAFKPTSQHYTNPTSNPVPASPINFHPESRSSDSSVIVQPFSKPGYITNSSRVVSNKSSELLFDLTQDTGLSHYQGGPTLSMAGMSESSFLSKRPSTSEVNNVNPKKPKPSESVSGANSSAVLPSVKSPSVTSSQAMLAKGTNTS
type: DOMAIN
name: DUF4195
description: Domain of unknown function DUF4195

phrase: CKICELSFETEHVLLQHMKDN
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type
Protein sequence:
MKIIRFGVSVPEELLEKFDQIIAEKGYVNRSEAIRDLMRDFIVRHEWEAGDKEVAGTITMLYNHDEADVVKELLDLQHDYLNEIISSIHVHMDEHNCLEVVIVKGKAKRIKEIADRLLSLKGVKHGKLVMTGTGKELV

Annotated regions:
phrase: RFGVSVPEELLEKFDQIIAEKGYVNRSEAIRDLMRDF
type: DOMAIN
name: CopG
description: Ribbon-helix-helix protein, CopG

phrase: AGTITMLYNHDEADVVKELLDLQHDYLNEIISSIHVHMDEHNCLEVVIVKGKAKRIKEIADRLLSLKGVKHGKLVM
type: DOMAIN
name: TF_NikR_Ni-bd_C
description: Transcription factor, NikR, nickel binding C-terminal
Protein sequence:
MAEEQVLNTHNASILLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTILGRKNLARTSSKPGKTQLLNFFNIDDKLRFVDVPGYGYAKVSKSERAKWGKMIEEYLTSRDNLRAVVSLVDLRHAPSKEDIQMYDFLKYYDIPVIVVATKADKIPHGKWNKHESVVKKALNFDKSDTFIVFSSVERIGIDDSWDAILEQV

Annotated regions:
phrase: EIALAGRSNVGKSSFINTILGRKNLARTSSKPGKTQLLNFFNIDDKLRFVDVPGYGYAKVSKSERAKWGKMIEEYLTSRDNLRAVVSLVDLRHAPSKEDIQMYDFLKYYDIPVIVVAT
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: DLPEIALAGRSNVGKSSFINTILGRKNLARTSSKPGKTQLLNFFNIDDKLRFVDVPGYGYAKVSKSERAKWGKMIEEYLTSRDNLRAVVSLVDLRHAPSKEDIQMYDFLKYYDIPVIVVATKADKIPHGKWNKHESVVKKALNFDKSDTFIVFSSVERIGIDDSWDAILEQ
type: DOMAIN
name: G_ENGB_dom
description: EngB-type guanine nucleotide-binding (G) domain

phrase: PEIALAGRSNVGKSSFINTILGRKNLARTSSKPGKTQLLNFFNIDDKLRFVDVPGYGYAKVSKSERAKWGKMIEEYLTSRDNLRAVVSLVDLRHAPSKEDIQMYDFLKYYDIPVIVVATKADKIPHGKWNKHESVVKKALNFDKSDTFIVFSSVERIGIDD
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: EIALAGRSNVGKSSFINTILGRKNLARTSSKPGKTQLLNFFNIDDKLRFVDVPGYGYAKVSKSERAKWGKMIEEYLTSRDNLRAVVSLVDLRHAPSKEDIQMYDFLKYYDIPVIVVATKADKIPHGKWNKHESVVKKALNFDKSDTFIVFSSVERIGIDDSWDAIL
type: DOMAIN
name: G_ENGB_dom
description: EngB-type guanine nucleotide-binding (G) domain
Protein sequence:
MVIRVGINGFGRIGRVVFRAAQRRNDIEIVGINDLLDADYMAYMLKYDSTHGRFEGAVEVQGGALVVNGKKIRVTSERDPANLKWNEINVDVVVESTGLFLSDDTARKHIQAGAKKVVITGPSKDDTPMFVMGVNHTTYKGEAIVSNASCTTNCLAPLAKVLNDKFGIVEGLMTTVHATTATQKTVDGPSQKDWRGGRGAAQNIIPSSTGAAKAVGKIIPSLNGKLTGMAFRVPTPNVSVVDLTVRLERPATYKQICDAIKAASEGELKGILGYVDEEIVSSDINGIPLTSVFDARAGISLNDNFVKLVSWYDNETGYSNKVHDLIAHITK

Annotated regions:
phrase: ASCTTNC
type: ACTIVE_SITE
name: GlycerAld_3-P_DH_AS
description: Glyceraldehyde 3-phosphate dehydrogenase, active site

phrase: IRVGINGFGRIGRVVFRAAQRRNDIEIVGINDLLDADYMAYMLKYDSTHGRFEGAVEVQGGALVVNGKKIRVTSERDPANLKWNEINVDVVVESTGLFL
type: DOMAIN
name: GlycerAld_3-P_DH_NAD(P)-bd
description: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain

phrase: IRVGINGFGRIGRVVFRAAQRRNDIEIVGINDLLDADYMAYMLKYDSTHGRFEGAVEVQGGALVVNGKKIRVTSERDPANLKWNEINVDVVVESTGLFLSDDTARKHIQAGAKKVVITGPSKDDTPMFVMGVNHTTYKGEAIVSNAS
type: DOMAIN
name: GlycerAld_3-P_DH_NAD(P)-bd
description: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain

phrase: LAPLAKVLNDKFGIVEGLMTTVHATTATQKTVDGPSQKDWRGGRGAAQNIIPSSTGAAKAVGKIIPSLNGKLTGMAFRVPTPNVSVVDLTVRLERPATYKQICDAIKAASEGELKGILGYVDEEIVSSDINGIPLTSVFDARAGISLNDNFVKLVSW
type: DOMAIN
name: GlycerAld_3-P_DH_cat
description: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain
Protein sequence:
MNNQWFSKLAVWLVVALVLFTVFKQFDSRGSGATASMGYSDFLEEVRANRIKSAIIQEGPSGTEILATTTDDRKVRTTATYLDRGLIGDLINNDVKFDVKPREEGSLLMTLLVSWGPMLLLIGVWIYFMRQMQGGGKGGAFSFGKSKARMLDESNNQVTFADVAGCDEAKEEVTEVVDFLKDPQKFQKLGGRIPRGLLLVGPPGTGKTLLAKGIAGEAKVPFFSISGSDFVEMFVGVGAARVRDMFENAKKNAPCIIFIDEIDAVGRQRGAGLGGGNDEREQTLNQMLVEMDGFETNLGVIVVAATNRPDILDSALLRPGRFDRQVYVTLPDIRGREQILNVHMRKIPISQDVAPAIIARGTPGMSGADLANLCNEAALMAARRNARNVEMQDFEKAKDKILMGPERKSMVMPEEERRNTAYHESGHALIGKLLPKCDPVHKVTIIPRGRALGVTMSLPEKDRYSYDREYMLNQISMLFGGRIAEEVFMNQMTTGASNDFERATNLARDMVMKYGMSDALGPMVYAENEGEVFLGRSVTKTTNISEQTMQKVDAEVRRIIDEQYKLARKLIEDNADKMHAMAKALLDWETIDTEQLDDIMAGKEPRPPKDWTPKTKDAAQSDGGDAGGAAVGSQHAPTVA

Annotated regions:
phrase: IPRGLLLVGPPGTGKTLLAKGIAGEAKVPFFSISGSDFVEMFVGVGAARVRDMFENAKKNAPCIIFIDEIDAVGRQRGAGLGGGNDEREQTLNQMLVEMDGFETNLGVIVVAATNRPDILDSALLRPGRFDRQVYVTLP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: AVWLVVALVLFTVFKQFDSRGSGATASMGYSDFLEEVRANRIKSAIIQEGPSGTEILATTTDDRKVRTTATYLDRGLIGDLINNDVKFDVK
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular

phrase: LLLVGPPGTGKTLLAKGIAGEAKVPFFSISGSDFVEMFVGVGAARVRDMFENAKKNAPCIIFIDEIDAVGRQRGAGLGGGNDEREQTLNQMLVEMDGFETNLGVIVVAATNRPDILDSALLRPGRFDRQVYV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: VIVVAATNRPDILDSALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: IARGTPGMSGADLANLCNEAALMAARRNARNVEMQDFE
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: MVMPEEERRNTAYHESGHALIGKLLPKCDPVHKVTIIPRGRALGVTMSLPEKDRYSYDREYMLNQISMLFGGRIAEEVFMNQMTTGASNDFERATNLARDMVMKYGMSDALGPMVYAENEGEVFLGRSVTKTTNISEQTMQKVDAEVRRIIDEQYKLARKLIEDNADKMHAMAKALLDWETIDTEQLDD
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41
Protein sequence:
TLYFIFGIWSGLLGTSLSLMIRSELGKPGTLLNDDQLYNVVVTAHGFIMIFFLVMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSLTLLLSSSAVESGAGTGWTVYPPLSSNLSHAGPSVDLAIFSLHLAGVSSILGAINFITTILNMRWEGLQMERLPLFVWSVFITAILLLLSXPVLAGAITMLLTDRNFNTTFFDPSGGGDPILYQHLF

Annotated regions:
phrase: TLYFIFGIWSGLLGTSLSLMIRSELGKPGTLLNDDQLYNVVVTAHGFIMIFFLVMPIMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSLTLLLSSSAVESGAGTGWTVYPPLSSNLSHAGPSVDLAIFSLHLAGVSSILGAINFITTILNMRWEGLQMERLPLFVWSVFITAILLLLSXPVLAGAITMLLTDRNFNTTFFDPSGGGDPILYQHL
type: DOMAIN
name: Cyt_c_oxase-like_su1_dom
description: Cytochrome c oxidase-like, subunit I domain
Protein sequence:
LEFAAGIPGSVGGAVYMNAGAHGSDISRVLVKALILFEDGTIDWLTNEEMAFSYRTSILQNERPGICLEAVLQLEQKERDEIVAQMQKNKDYRKETQPVSNPCAGSIFRNPLPEHAGRLVDEAGLKGHQIGGAKVSEMHGNFIVNAGGATAQDVLDLIAFIQKTIKEKYDIDMHTEVEIIGEKR

Annotated regions:
phrase: EIVAQMQKNKDYRKETQPVSNPCAGSIFRNPLPEHAGRLVDEAGLKGHQIGGAKVSEMHGNFIVNAGGATAQDVLDLIAFIQKTIKEKYDIDMHTEVEI
type: DOMAIN
name: MurB_C
description: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal
Protein sequence:
MAKKGKKYVEAAKLVDRAKAYDVAEAVALTKKTNTAKFDATVEVAFRLGVDPRKNDQQIRGAVVLPNGTGKTQRVLVFAKGEKAKEAEAAGADYVGDSDYIAKIQQGWFEFDVIVATPDMMGEVGKIGRVLGPKGLMPNPKTGTVTFEVEKAIGEIKAGKVEYRVDKAGNIHVPIGKVSFEDEKLVENFTTMYDTILKAKPAAAKGVYVKNVAVTSTMGPGVKVDASTFNVK

Annotated regions:
phrase: MGEVGKIGRVLGPKGLMP
type: CONSERVED_SITE
name: Ribosomal_uL1_CS
description: Large ribosomal subunit protein uL1, conserved site
Protein sequence:
MDDKKAGAGVSAEKQKALAAALSQIEKQFGKGSIMRLGDGEIEQDIQVVSTGSLGLDIALGVGGLPRGRVVEIYGPESSGKTTLTLQVVAEMQKLGGTCAFIDAEHALDVQYAGKLGVDVGNLLISQPDTGEQALEITDALVRSGSIDLIVIDSVAALVPKAEIEGEMGDSLPGLQARLMSQALRKLTGTIKRTNCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIKKGDEVVGNETKVKVVKNKVSPPFREAFFDILYGQGISRQGEIIDLGVDAKIVEKAGAWYSYNGEKIGQGKDNAREYLRENPDIADEIENKVRLALGVAPLNTVAGAPAEVEG

Annotated regions:
phrase: GEIIDLGVDAKIVEKAGAWYSYNGEKIGQGKDNAREYLRENPDIADEIENKVRLA
type: DOMAIN
name: RecA-like_C
description: RecA-like, C-terminal

phrase: KALAAALSQIEKQFGKGSIMRLGDGEIEQDIQVVSTGSLGLDIALGVGGLPRGRVVEIYGPESSGKTTLTLQVVAEMQKLGGTCAFIDAEHALDVQYAGKLGVDVGNLLISQPDTGEQALEITDALVRSGSIDLIVIDSVAALVPKAEIEGEMGDSLPGLQARLMSQALRKLTGTIKRTNCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRIGSIKKGDEVVGNETKVKVVKNKVSPPFREAFFDILYGQGI
type: DOMAIN
name: RecA-like_N
description: RecA-like, N-terminal

phrase: RGRVVEIYGPESSGKTTLTLQVVAEMQKLGGTCAFIDAEHALDVQYAGKLGVDVGNLLISQPDTGEQALEITDALVRSGSIDLIVIDSVAALVPKAEIEGEMGDSLPGLQARLMSQALRKLTGTIKRTNCLVIFINQIRMKIGVMFGSPETTTGGNALKFYASVRLDIRRI
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: GVMFGSPETTTGGNALKFYASVRLDIRRIGSIKKGDEVVGNETKVKVVKNKVSPPFREAFFDILYGQGISRQG
type: DOMAIN
name: RecA_monomer-monomer_interface
description: DNA recombination and repair protein RecA, monomer-monomer interface

phrase: ALKFYASV
type: CONSERVED_SITE
name: DNA_recomb/repair_RecA_CS
description: DNA recombination/repair protein RecA, conserved site

phrase: DIQVVSTGSLGLDIALGVGGLPRGRVVEIYGPESSGKTTLTLQVVAEMQKLGGTCAFIDAEHALDVQYAGKLGVDVGNLLISQPDTGEQALEITDALVRSGSIDLIVIDSVAALVPKAEIEGEMGDSLPGLQARLMSQALRKLTGTIKRTNCLVIFINQ
type: DOMAIN
name: RecA_ATP-bd
description: DNA recombination and repair protein RecA-like, ATP-binding domain
Protein sequence:
MLTYETWEEDSMSFSERDETKGALAVLEWAYKQYNDEIVYACSFGVEGMVLLHLINEVNPFAQVVFLDTNVHFCETYALIERVRQRFPKLNIIEKQPGLTLEEQEDKYGKDLWEHNPNLCCKLRKILPLEELLANKNAWISGLRREQSETRKHTKFINQDHRFQSIKICPLIHWTWKEVWRYVYKHNLPYNPLHDVGYPSIGCEKCTLPVGKYGSSRDGRWAGSVKTECGLHDQ

Annotated regions:
phrase: EIVYACSFGVEGMVLLHLINEVNPFAQVVFLDTNVHFCETYALIERVRQRFPKLNIIEKQPGLTLEEQEDKYGKDLWEHNPNLCCKLRKILPLEELLANKNAWISGLRREQSETRKHTKFINQDHRFQSIKICPLIHWTWKEVWRYVYKHNLPYNPLHDVGYPSIGCEKCTL
type: DOMAIN
name: PAPS_reduct
description: Phosphoadenosine phosphosulphate reductase
Protein sequence:
APRSVDWREKGYVTPVKDQGQCGSCWAFSTTGALEGQHFRTKGKLVSLSEQNLVDCSRPEGNQGCNGGLMDQAFQYVQDNGGIDSEESYPYTAKDDEDCRYKAEYNAANDTGFVDIPQGHERALMKAVASVGPVSVAIDAGHSSFQFYQSGIYYEPDCSSEDLDHGVLVVGYGFEGGKKYWIVKNSWGEKWGDKGYIYMAKDRKNHCGIATAASYPLV

Annotated regions:
phrase: QGQCGSCWAFSTTGA
type: DOMAIN
name: Peptidase_C1A_C
description: Peptidase C1A, papain C-terminal

phrase: HGVLVVGYGF
type: DOMAIN
name: Peptidase_C1A_C
description: Peptidase C1A, papain C-terminal

phrase: YWIVKN
type: DOMAIN
name: Peptidase_C1A_C
description: Peptidase C1A, papain C-terminal

phrase: PRSVDWREKGYVTPVKDQGQCGSCWAFSTTGALEGQHFRTKGKLVSLSEQNLVDCSRPEGNQGCNGGLMDQAFQYVQDNGGIDSEESYPYTAKDDEDCRYKAEYNAANDTGFVDIPQGHERALMKAVASVGPVSVAIDAGHSSFQFYQSGIYYEPDCSSEDLDHGVLVVGYGFEGGKKYWIVKNSWGEKWGDKGYIYMAKDRKNHCGIATAASY
type: DOMAIN
name: Peptidase_C1A_C
description: Peptidase C1A, papain C-terminal

phrase: PRSVDWREKGYVTPVKDQGQCGSCWAFSTTGALEGQHFRTKGKLVSLSEQNLVDCSRPEGNQGCNGGLMDQAFQYVQDNGGIDSEESYPYTAKDDEDCRYKAEYNAANDTGFVDIPQGHERALMKAVASVGPVSVAIDAGHSSFQFYQSGIYYEPDCSSEDLDHGVLVVGYGFEGGKKYWIVKNSWGEKWGDKGYIYMAKDRKNHCGIATAASY
type: DOMAIN
name: Peptidase_C1A_papain-like
description: Papain-like cysteine endopeptidase

phrase: YWIVKNSWGEKWGDKGYIY
type: ACTIVE_SITE
name: Pept_asp_AS
description: Cysteine peptidase, asparagine active site

phrase: QGQCGSCWAFS
type: ACTIVE_SITE
name: Pept_cys_AS
description: Cysteine peptidase, cysteine active site

phrase: LDHGVLVVGY
type: ACTIVE_SITE
name: Pept_his_AS
description: Cysteine peptidase, histidine active site

phrase: APRSVDWREKGYVTPVKDQGQCGSCWAFSTTGALEGQHFRTKGKLVSLSEQNLVDCSRPEGNQGCNGGLMDQAFQYVQDNGGIDSEESYPYTAKDDEDCRYKAEYNAANDTGFVDIPQGHERALMKAVASVGPVSVAIDAGHSSFQFYQSGIYYEPDCSSEDLDHGVLVVGYGFEGGKKYWIVKNSWGEKWGDKGYIYMAKDRKNHCGIATAASYP
type: DOMAIN
name: Peptidase_C1A_C
description: Peptidase C1A, papain C-terminal
Protein sequence:
MAGFGFRRHGVQPDLASRTWPCTALFSLLFIPVFSKGMHAAQPAVVLASSRGVASFVCEYGSSGNAAEVRVTMLRQAGSQMTEVCAATYTVEDELAFLDDSTCTGTSSGNKVNLTIQGLRAMGTGLYICKVELMYPPPYYVGMGNGTQIYVIDPEPCPDSDFLLWILAAVSSGLFFYSFLITAVSLSKMLKKRSPLTTGVYVKMPPTGPECEKQFQPYFIPIN

Annotated regions:
phrase: QPAVVLASSRGVASFVCEYGSSGNAAEVRVTMLRQAGSQMTEVCAATYTVEDELAFLDDSTCTGTSSGNKVNLTIQGLRAMGTGLYICKVELMYPPPYYVGMGNGTQIY
type: DOMAIN
name: Ig_V-set
description: Immunoglobulin V-set domain
Protein sequence:
MSPSSVALLAAVVIVVMGGAAEAANTKFVSASCNTEKIARGSPFFNNLRDAIEDLRQNTAYIGYDYKTSHVGSGGAPTAYGRAICKQSISQSNCTSCLSNVATRIYGICGNAIGARVQLTDCYMQYEQRSF

Annotated regions:
phrase: TKFVSASCNTEKIARGSPFFNNLRDAIEDLRQNTAYIGYDYKTSHVGSGGAPTAYGRAICKQSISQSNCTSCLSNVATRIYGICGNAIGARVQLTDCYMQYEQRS
type: DOMAIN
name: GNK2
description: Gnk2-homologous domain

phrase: CNTEKIARGSPFFNNLRDAIEDLRQNTAYIGYDYKTSHVGSGGAPTAYGRAICKQSISQSNCTSCLSNVATRIYGICGNAIGARVQLTDCYMQYE
type: DOMAIN
name: GNK2
description: Gnk2-homologous domain