nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MLIPSKLSRPVRLDHTVVRERLLAKLSGANNFRLLLVTSPAGYGKTTLVSQWAAGKNELGWYSLDEGDNQQERFASYLIAAIQQATGGHCSTSEAMAQKRQYASLTSLFAQLFIELAQWHRPLYLVIDDYHLITNPVIHDAMRFFLRHQPENFTLVVLSRNLPQLGIANLRVRDQLLEIGSQQLAFNHQEAKQFFDRRLSSPIEAAESSRMCDDVAGWATALQLIALSARQNHTSAHHSARRLAGINASHLSDYLVDEVLDNVDVSTRHFLLKSAILRSMNDALIVRVTGEENGQMRLEEIERQGLFLQRMDDTGEWFSYHPLFGSFLRQRCQWELAAELPEIHRAAAESWMEQGFPSEAIHHALAAGDAQMLRDILLNHAWGLFNHSELALLEESLKALPWESLLENPRLVLLQAWLMQSQHRYSEVNTLLARAEQEIKGVMDGTLHAEFNALRAQVAINDGNPEEAERLAKLALDELPLAWFYSRIVATSVHGEVLHCKGNLSQSLSLMQQTEQMARHHDVWHYALWSLIQQSEIQFAQGFLQAAWETQERAFQLIKEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIAVLSTFQPQQQLQCLTLLVQCSLARGDLDNARSQLNRLEKLLGNGRYHCDWISNADKVRVIYWQLTGDKKSAANWLRHTPKPAFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQSGRKNDAQRVLLDALQLANRTGFISHFVIEGEAMAQQLRQLIQLNTLPEMEQHRAQRILRYINQHHRHKFAHFDEGFVERLLNHPDVPELIRTSPLTQREWQVLGLIYSGYSNEQIAGELAVAATTIKTHIRNLYQKLGVAHRQDAVQHAQQLLKMMGYGV

Annotated regions:
phrase: LTQREWQVLGLIYS
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: GYSNEQIAGELAVAAT
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: TIKTHIRNLYQK
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: ELIRTSPLTQREWQVLGLIYSGYSNEQIAGELAVAATTIKTHIRNLYQKLGVAHRQDAVQHAQQL
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: GYSNEQIAGELAVAATTIKTHIRNLYQ
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: AEFNALRAQVAINDGNPEEAERLAKLALDELPLAWFYSRIVATSVHGEVLHCKGNLSQSLSLMQQTEQMARHHDVWHYALWSLIQQSEIQFAQGFLQAAWETQERAFQLIKEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIAVLSTFQPQQQLQCLTLLVQCSLARGDLDNARSQLNRLEKLLGNGRYHCDWISNADKVRVIYWQLTGDKKSAANWLRHTPKPAFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQSGRKNDAQRVLLDALQLANRTGFISHFVIEGEAMAQQLRQL
type: DOMAIN
name: TPR_MalT
description: MalT-like TPR region

phrase: PLTQREWQVLGLIYSGYSNEQIAGELAVAATTIKTHIRNLYQKLGVAHRQDAVQH
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: LTQREWQVLGLIYSGYSNEQIAGELAVAATTIKTHIRNLYQKLGVAHRQDAVQHAQ
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: TSPLTQREWQVLGLIYSGYSNEQIAGELAVAATTIKTHIRNLYQKLGVAHRQDAVQH
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal
Protein sequence:
MINEIKKDTQLRMEKSLETFKNHIAKVRTGRAQPSLLDGIQVEYYGSPTPLRQLANVVAEDARTLAVTVFDRSLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKGEAEQGKIAVRNVRRDANDQIKALLKDKEISEDEERKAQDEIQKITDTFVKKVDEVLADKEKELLDF

Annotated regions:
phrase: FKNHIAKVRTGRAQPSLLDGIQVEYYGSPTPLRQLANVVAEDARTLAVTVFDRSLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIVKGEAEQGKIAVRNVRRDANDQIKALLKDKEISEDEERKAQDEIQKITDTFVKKVDEVLADKEKEL
type: DOMAIN
name: Ribosome_recyc_fac_dom
description: Ribosome recycling factor domain
Protein sequence:
MKKFLFSLCLLSSTVLASPQSELTERLNQNAGFEAGFTQKVLSPEGDVLMQGEGDVKILRPNLFRWHTQTPDENLLVTDGNTLWYYNPFVEQVTLMGLEKATTQTPFVLLTRNKASDWDNYSVSQNGDAFTVSPKADSAVKSEFIVRIQENGKVTGFSVVEQDGQRSDFDFTKFEAKKPAKDNFTFAIPDGVDIDDQR

Annotated regions:
Protein sequence:
MAAKSDGAAAVAGPGPEGPAGADRGGAGGRGEAAAGIAGPGPVEAGCPGPRYELRDCCWVLCALLVFFSDGATDLWLAASYYLQGQSTYFGLTLLFVLLPSLVVQLLSFRWFVYDYSEPAGTPGPAVSTKDSDIVGAAISTKDSAVAFRTKEGSAELVPRPAPSSAGTYRRRCCRLCVWLLQTLVHLLQLGQVWRYLRALYLGLQSRWRGERLRRHFYWQMLFESADVSMLRLLETFLRSAPQLVLQLSLLVHRGREPELLTALSISASLVSLAWTLASYQKVLRDSRDDKRPLSYKGAVVQVLWHLFTIAARTLAFALFASVYKLYFGIFIVAHWCIMTFWVIQGETDFCMSKWEEIIYNMVVGIIYIFCWFNVKEGRSRRRVTLYYCIVLLENAALTGFWYSSRNFSTDFYSLILVCVVASSFALGIFFMCVYYCLLHPNGPMLGPQAPGCIFPEAPGPCGPPADAITSPPRSLPRTTGTERDGVAVGGERAGTPTLPVFQVRPGLPPTPVARPLRTEGPVIRIDLPRKKYPAWDAHFIDRRLRKTILALEYSSPATPRLQYRSMGTSQELLEYETTV

Annotated regions:
Protein sequence:
MKKLLSILAVFGVSAVGTTSVVACNKTESNNLSIVKTIAVPATVATANPKQVTNAEIKTALEANVLKAVQGVVKTATAADFQFDVYQDNKGTSLTTINLEEGNVEVYVQITPAKDKTVVIGETGYIKVTLPKIKVDISGVVIDQQIVEIKAADPKQVTKDELNAVNTYATLASAVLEAIKNKAPNAGASDFEITNNCDAGDYSAQKDVKVTVKAKDESPNISGEFKVNAKVKATLAPPKAG

Annotated regions:
phrase: KKLLSILAVFGVSAVGTTSVVACNK
type: CONSERVED_SITE
name: Lipoprotein_mollicutes-type_CS
description: Mollicutes-type lipoprotein signal peptide region

phrase: MKKLLSILAVFGVSAVGTTSVVA
type: CONSERVED_SITE
name: Lipoprotein_mollicutes-type_CS
description: Mollicutes-type lipoprotein signal peptide region
Protein sequence:
MTLADTIFKENIKKIMEQGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNDKYNVHYWNDWEVGDTGTIGQRYGAVVKKHNIINKILQQLEANPWNRRNIISLWDYEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCHPRLVLNVPDGTNFFDIKAEDFELLDYNPVKPQLKFDLAI

Annotated regions:
phrase: IFKENIKKIMEQGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNDKYNVHYWNDWEVGDTGTIGQRYGAVVKKHNIINKILQQLEANPWNRRNIISLWDYEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQA
type: DOMAIN
name: Thymidate_synth/dCMP_Mease_dom
description: Thymidylate synthase/dCMP hydroxymethylase domain

phrase: FKENIKKIMEQGVFSENARPRYKDGNVANSKYITGSFAEYDLSKGEFPITTLRPIAIKSAIKEVLWIYQDQSNSLELLNDKYNVHYWNDWEVGDTGTIGQRYGAVVKKHNIINKILQQLEANPWNRRNIISLWDYEAFEETDGLLPCAFQTMFDVRRVDGDIYLDATLTQRSNDMLVAHHINAMQYVALQMMIAKHFGWKVGKFFYFINNLHIYDNQFEQAEELLRREPSDCHPRLVLNVPDGTNFFDIKAEDFELLDYNPVKPQLKFDL
type: DOMAIN
name: Thymidate_synth/dCMP_Mease_dom
description: Thymidylate synthase/dCMP hydroxymethylase domain

phrase: RRNIISLWDYEAFEETDGLLPCAFQTMFD
type: ACTIVE_SITE
name: Thymidylate_synthase_AS
description: Thymidylate synthase, active site
Protein sequence:
MLELYEKRRALLLLRLAAMFLSLAALLITVLNREDGFFSINVFGSPQPILAKATADFTLVKGLKFFAGAMGIVAGYSFLQLAIAMASIFSGAPSILGGKRMAWLCFVGDMTASHLCAAAAAVSAQLAYLGKRGAPMWSAVCTYFSHYCLVFGLAVILAFLATLAALLVASISSYHLAYDVFCALYAMYKELVVDEVCSRSMKKTIPRIIKSGHQQRHHHRKPPLAPHCHGATSCKLCILQQQQWADLELHLSRAITLSAPSAVEMKIPPPPSVPSVVEMEMEIPSVSRVLEMETPCK

Annotated regions:
phrase: RRALLLLRLAAMFLSLAALLITVLNREDGFFSINVFGSPQPILAKATADFTLVKGLKFFAGAMGIVAGYSFLQLAIAMASIFSGAPSILGGKRMAWLCFVGDMTASHLCAAAAAVSAQLAYLGKRGAPMWSAVCTYFSHYCLVFGLAVILAFLAT
type: DOMAIN
name: CASP_dom
description: Casparian strip membrane protein domain
Protein sequence:
MPIRLFRRTCVHGSIHRHLQRRSWRGRFDRETLSGWPRGPSRSVHCFPVGIFRRKTGGGYPYWKIPWGFLPCWGERTVARTALRSGVWHLPLPETSVHYIVLWIEKDRIVDREHEDEKRPNAGEQGAEERPSKESERPDDAGRDTRKDTRDAEGDKNYWTGRNNQQYQQEHQQQKRPGGSPGPKFDFSRKNRIALGFFVFLIATFTFMLFSEGTAMSTQEVPYSAFLNYVEANQVNAVEIQDKNMITFALRNNMTAMTRIPYEDTTLMETLKTHNVQITGTERGVSMLQVVLQLLPWLIFIGFTVMLWRQTKGANGNVMAFSKSRAKEYMDTDVKTTFDDVAGQKEAKYELQEVVDFLKHPSKFQEIGARIPKGVLLVGPPGTGKTLLAKAVAGEAGVAFFHMSGSDFVEMFVGVGASRVRDLFEQGRKNAPCILFIDELDAVGRTRGSGLGGGHDEREQTLNQMLVEMDGFDTATGVIVIAATNRPDVLDPALLRPGRFDRQVVVDMPDVAEREAILGIHCKKIKKADDVDLNRIARATPGTSGADLANLVNEAALFAARTGRTTVTMHDFEEGRDKILLGVAKHSKVMTPVEKRATAYHEAGHTLLHYYLKHLDPLHKVTIIPHGRALGLTISLPEKDAYTKNRSALNDWIKVCMGGYVAEDLVYGETTTGTSNDIKQATEIARRMVTEWGMSDMGFIGFGKEDEPLFLGREIAQHKDYSEDTARRIDAEVTKILEQAMADTRSILTEHRDQLDTLTNELVEKETL

Annotated regions:
phrase: IPKGVLLVGPPGTGKTLLAKAVAGEAGVAFFHMSGSDFVEMFVGVGASRVRDLFEQGRKNAPCILFIDELDAVGRTRGSGLGGGHDEREQTLNQMLVEMDGFDTATGVIVIAATNRPDVLDPALLRPGRFDRQVVVDMP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VLLVGPPGTGKTLLAKAVAGEAGVAFFHMSGSDFVEMFVGVGASRVRDLFEQGRKNAPCILFIDELDAVGRTRGSGLGGGHDEREQTLNQMLVEMDGFDTATGVIVIAATNRPDVLDPALLRPGRFDRQVVV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: VIVIAATNRPDVLDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: FFVFLIATFTFMLFSEGTAMSTQEVPYSAFLNYVEANQVNAVEIQDKNMITFALRNNMTAMTRIPYEDTTLMETLKTHNVQIT
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular

phrase: DVDLNRIARATPGTSGADLANLVNEAALFAARTGRTTVTMHDFE
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: VMTPVEKRATAYHEAGHTLLHYYLKHLDPLHKVTIIPHGRALGLTISLPEKDAYTKNRSALNDWIKVCMGGYVAEDLVYGETTTGTSNDIKQATEIARRMVTEWGMSDMGFIGFGKEDEPLFLGREIAQHKDYSEDTARRIDAEVTKILEQAMADTRSILTEHRDQLDTLTNELVEKET
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41
Protein sequence:
MEFLFGRRKTPEEMLRQNQRALNKAMREMDRERQKLEQQEKKIIADIKKMAKQGQMDAVKIMAKDLVRTRRYVKKFIMMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMATMNRQLKLPQIQKIMMEFEKQSEIMDMKEEMMNDAIDDAMGDEDDEEESDAVVSQVLDELGLTLTDELSNLPSTGGSLSVAGAKKGEPSAALADADADLEERLNNLRRD

Annotated regions:
Protein sequence:
MTELRQRVVREDAPPEDKESESEAKLDGETASDSESRAETAPLPTSVDDTPEVLNRALSNLSSRWKNWWVRGILTLAMIAFFFIIIYLGPMVLMMIVMCVQIKCFHEIITIGYNVYHSYDLPWFRTLSWYFLLCVNYFFYGETVTDYFFTLVQREEPLRILSKYHRFISFALYLTGFCMFVLSLVKKHYRLQFYMFGWTHVTLLIVVTQSHLVIHNLFEGMIWFIVPISCVICNDIMAYMFGFFFGRTPLIKLSPKKTWEGFIGGFFATVVFGLLLSYVMSGYRCFVCPVEYNNDTNSFTVDCEPSDLFRLQEYNIPGVIQSAIGWKTVRMYPFQIHSIALSTFASLIGPFGGFFASGFKRAFKIKDFANTIPGHGGIMDRFDCQYLMATFVNVYIASFIRGPNPSKLIQQFLTLRPDQQLHIFNTLKSHLTDKGILTSALEDE

Annotated regions:
Protein sequence:
MLFNLNYIDPTAFSIGPLSIKWYGIIIAVGILIGYFIAQESLKYVGLHKDRLVDVIFYSAIFGFIAARIYFVIFQWPYYAQNPIEIPMIWHGGIAIHGGLLGGFITGIIVCKIKNLNPFQIGDIVAPSIILAQGIGRWGNFMNHEAHGGPVSRTFLENLHIPEFIIRNMYIEGVYYHPTFLYESIWDILGFIILITIRKHLRVGETFTLYLIWYSIGRFFVEGLRTDSLMLTSHIRVAQLVSVILIIIGLVILIYRRIKYQPSLYKEAGPLTWNSSKAKVKS

Annotated regions:
Protein sequence:
MRFFALFIYRPVATILIAAAITLCGILGFRLLPVAPLPQVDFPVIMVSASLPGASPETMASSVATPLERSLGRIAGVNEMTSSSSLGSTRIILEFNFDRDINGAARDVQAAINAAQSLLPSGMPSRPTYRKANPSDAPIMILTLTSESWSQGKLYDFASTQLAQTIAQIDGVGDVDVGGSSLPAVRVGLNPQALFNQGVSLDEVREAIDSANVRRPQGAIEDSVHRWQIQTNDELKTAAEYQPLIIHYNNGAAVRLGDVASVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDGIRAKLPELRAMIPAAIDLQIAQDRSPTIRASLQEVEETLAISVALVILVVFLFLRSGRATLIPAVAVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENIARHLEAGMKPLQAALQGTREVGFTVISMSLSLVAVFLPLLLMGGLPGRLLREFAVTLSVAIGISLVVSLTLTPMMCGWMLKSSKPRTQPRKRGVGRLLVALQQGYGTSLKWVLNHTRLVGVVFLGTVALNIWLYIAIPKTFFPEQDTGVLMGGIQADQSISFQAMRGKLQDFMKIIRDDPAVNNVTGFTGGSRVNSGMMFITLKPRGERKETAQQIIDRLRVKLAKEPGARLFLMAVQDIRVGGRQANASYQYTLLSDSLAALREWEPKIRKALSALPQLADVNSDQQDNGAEMNLIYDRDTMSRLGIDVQAANSLLNNAFGQRQISTIYQPMNQYKVVMEVDPRYSQDISALEKMFVINRDGKAIPLSYFAQWRPANAPLSVNHQGLSAASTIAFNLPTGTSLSQATEAINRTMTQLGVPSTVRGSFSGTAQVFQQTMNSQLILIVAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRSGGLTPEQAIFQACLLRFRPIMMTTLAALFGALPLVLSGGDGSELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRLRLRFSRKNSKPVVEI

Annotated regions:
Protein sequence:
MIARTKIICTIGPATNTPEMLEKLLDAGMNVARLNFSHGTHESHGRTIAILKELREKRQVPLAIMLDTKGPEIRLGQVESPIKVQPGDRLTLVSKEILGSKESGVTLYPSCVFPYVRERAPVLIDDGYIQAVVVNAQEHMVEIEFQNSGEIKSNKSLSIKDIDVALPFMTEKDIADLKFGVEQELDLIAASFVRCNEDIDSMRKVLESFGRPNMPIIAKIENHLGVQNFQEIARAADGIMIARGDLGIELSIVEVPGLQKFMARASRETGRFCITATQMLESMIRNPLPTRAEVSDVANAIYDGTSAVMLSGETALGAHPVHAVKTMRSIIQETEKTFDYHAFFQLNDKNSALKVSPYLEAIGFSGIQIAEKASAKAIIVYTQTGGSPMFLSKYRPYLPIIAVTPNRNVYYRLAVEWGVYPMLTLESNRTVWRHQACVYGVEKGILSNYDKILVFSRGAGMQDTNNLTLTTVHDVLSPSLDEIVP

Annotated regions:
phrase: EAIGFSGIQIAEKASAKAIIVYTQTGGSPMFLSKYRPYLPIIAVTPNRNVYYRLAVEWGVYPMLTLESNRTVWRHQACVYGVEKGILSNYDKILVFSRGA
type: DOMAIN
name: Pyrv_Knase_C
description: Pyruvate kinase, C-terminal

phrase: ARTKIICTIGPATNTPEMLEKLLDAGMNVARLNFSHGTHESHGRTIAILKELREKRQVPLAIMLDTKGPEIRLGQVESPIKVQPGDRLTLVSKEILGSKESGVTLYPSCVFPYVRERAPVLIDDGYIQAVVVNAQEHMVEIEFQNSGEIKSNKSLSIKDIDVALPFMTEKDIADLKFGVEQELDLIAASFVRCNEDIDSMRKVLESFGRPNMPIIAKIENHLGVQNFQEIARAADGIMIARGDLGIELSIVEVPGLQKFMARASRETGRFCITATQMLESMIRNPLPTRAEVSDVANAIYDGTSAVMLSGETALGAHPVHA
type: DOMAIN
name: Pyrv_Knase_brl
description: Pyruvate kinase, barrel
Protein sequence:
MDPNCSCAAGGSYACAGSCKCKKCKCTSCKKSCCSCCPLGCAKCAQGCIRKGASEKCSCCA

Annotated regions:
phrase: CAAGGSYACAGSCKCKKCKCTSCKKSCCSCCPLG
type: DOMAIN
name: TNFR/NGFR_Cys_rich_reg
description: TNFR/NGFR cysteine-rich region
Protein sequence:
MFLRHFIVFSFIALLAGCAGFGARESVQGQGNPAQWRLHKDQLTGLDGWQINGKIGIRAPKDSGSGTLFWLQRQDYYDIRLSGPLGRGAARLTGRPGQVSLEVANQGRYESASPETLLEEQLGWKLPVSHLAWWVRGLPAPDSKSRLTLDGDSHLASLEQDGWQVEYSSYSQQNGYWLPERIKLNGSDLDVTLVIKEWLPRKLGQ

Annotated regions:
Protein sequence:
MEQTDIKSLTLTELWEEFQGRGEKAFRADQVYQWMHEKLAEDISRMSNLPKAFREWLEKEYEYVTLEIVEIQRSKLDGTCKYLFRLPDGHVIESVLMRYRHGNSVCISSQAGCRMGCRFCASAIGGLKRNLRPSEMLEQIYRIQQDCGERVSNVVVMGTGEPLDNYDNLVRFIRLLSHEKGLNISQRSITVSTCGIVPGIRALAEEELSVTLALSLHAVTQEKRRELMPIANRYELKEVLDACGYYFQKTGRRLTFEYSLVQGVNDSREDAKALAALAGPLHAHVNLIPVNPVTERDFVQPGEKIIDNFKKNLEKCGINATLRREMGRDIDGACGQLRRKYLKGGE

Annotated regions:
phrase: YRHGNSVCISSQAGCRMGCRFCASAIGGLKRNLRPSEMLEQIYRIQQDCGERVSNVVVMGTGEPLDNYDNLVRFIRLLSHEKGLNISQRSITVSTCGIVPGIRALAEEELSVTLALSLHAVTQEKRRELMPIANRYELKEVLDACGYYFQKTGRRLTFEYSLVQGVNDSREDAKALAALAGPLHAHVNLIPVNPVTERDFVQPGEKIIDNFKKNLEKCGINATLRREMGR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: EQTDIKSLTLTELWEEFQGRGEKAFRADQVYQWMHEKLAEDISRMSNLPKAFREWLEKEYEYVTLEIVEIQRSKLDGTCKYLFRLPDGHVIESVLMRYRHGNSVCISSQAGCRMGCRFCASAIGGLKRNLRPSEMLEQIYRIQQDCGERVSNVVVMGTGEPLDNYDNLVRFIRLLSHEKGLNISQRSITVSTCGIVPGIRALAEEELSVTLALSLHAVTQEKRRELMPIANRYELKEVLDACGYYFQKTGRRLTFEYSLVQGVNDSREDAKALAALAGPLHAHVNLIPVNPVTERDFVQPGEKIIDNFKKNLEKCGINATLRREMGRDIDGACGQLRRK
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SSQAGCRMGCRFCASAIGGLKRNLRPSEMLEQIYRIQQDCGERVSNVVVMGTGEPLDNYDNLVRFIRLLSHEKGLNISQRSITVSTCGIVPGIRALAEEELSVTLALSLHAVTQEKRRELMPIANRYELKEVLDACGYYFQKTGRRLTFEYSLVQGVNDSRE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: DIKSLTLTELWEEFQGRGEKAFRADQVYQWMHEKLAEDISRMSNLPKAFREWLEKE
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MTPQDLKDVMSSGLLSFPVTDFDSNGNFNAKGYAARLEWLAPYGASALFAAGGTGEYFSLYGEEYGQIIKTAVDTCRGKVPIIAGAGGPTRTAIAHAQEAERLGAHGVLLLPHYLTEAGQEGLIAHVEQVCKSVKFGVIVYNRDRTRFTPESLAILAERCPNLVGFKDGMGNIETMSAIFMKMGDRFAYLGGLPTAEVYAAAYKALGTPVYSSAVFNFIPKTAMAFYEAVRTDDMATQHKLLKEFFMPYLKIRNRVEGYGVSIIKAGAKLVGHDAGPVRAPLTDLKPSELEELKALIDKLGPQ

Annotated regions:
Protein sequence:
MLMILLFQRLGIIMILAFLLVNNSYFRQLIEERSKREKLVLIIIFGIFVIISNMTGIEITSDKSLVERPILTTISHSDSLANTRTLVITTASLVGGPLVGTVVGFIGGVHRFFQGNFSGAFYIVSSALVGYISGRLGDQLKTNNLYPSTSQVIVISIIAESIQMLFVGFFTGWDLVKLIFIPMMLLNSLGSTLFLAILKTYLSNERQLRAVQTRDVLDLTQQTLPYLRQGLSQQSATKVCNIIKQHTNFDAVGLTDRTNVLAHIGVGQDHHIAGQAVKTDLSKSVILNGQPQIALDKTAIACPDQSCLLNSAIVVPLKINNETVGALKMYFSGDKKMTEVEENLALGLAQIFSGQLAIGIAEEQNKLANIAEIKALQSQINPHFFFNAINTISALIRLDANKARYALMQLSTFFRTSLQGGQDREISLEQEKAHVDAYMNLEKLRFPDKYQLDYHITVSTKMTLPPFGLQVLVENAVRHAFKERKKDNHICISITDQGEFYKVAVSDNGQGISPNMIDKLGQETVSESKGTGTALVNLNNRLNLLYGSASQLHFDSTDQGTTVWYEIPYQKGDKDEHFNS

Annotated regions:
phrase: LQVLVENAVRHAFKERKKDNHICISITDQGEFYKVAVSDNGQGISPNMIDKLGQETVSESKGTGTALVNLNNRLNLLYGSASQLHFDSTDQGTTVWYEIPY
type: DOMAIN
name: HATPase_dom
description: Histidine kinase/HSP90-like ATPase domain

phrase: YFRQLIEERSKREKLVLIIIFGIFVIISNMTGIEITSDKSLVERPILTTISHSDSLANTRTLVITTASLVGGPLVGTVVGFIGGVHRFFQGNFSGAFYIVSSALVGYISGRLGDQLKTNNLYPSTSQVIVISIIAESIQMLFVGFFTGWDLVKLIFIPMMLLNSLGSTLFLAILK
type: DOMAIN
name: Sig_transdc_His_kinase_LytS_TM
description: Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region

phrase: LPPFGLQVLVENAVRHAFKERKKDNHICISITDQGEFYKVAVSDNGQGISPNMIDKLGQETVSESKGTGTALVNLNNRLNLLYGSASQLHFDSTDQGTTVWYEIPYQ
type: DOMAIN
name: HATPase_dom
description: Histidine kinase/HSP90-like ATPase domain

phrase: AEIKALQSQINPHFFFNAINTISALIRLDANKARYALMQLSTFFRTSLQGGQDREISLEQEKAHVDAYMNLEKLRFPD
type: DOMAIN
name: Sig_transdc_His_kin_internal
description: Signal transduction histidine kinase, internal region
Protein sequence:
MRLDVVTIFPEYLEPLRAALLGKAIDKGLISVEVHDLRDWTHDVHKAVDDSPYGGGPGMVMKPTVWGPALDDVLAAGDGDTDTLLVVPTPAGVPFTQATAERWAGEKRIVFACGRYEGIDQRVFDDAARRVRVEEVSIGDYVLIGGEAAVLVMTEAFVRLIPGVLGNQQSHQEDSFSDGLLEGPSYTRPATWRGLDVPPVLLSGDHAKVAAWRREQSLQRTAERRPDLLP

Annotated regions:
phrase: GKAIDKGLISVEVHDLRDWTHDVHKAVDDSPYGGGPGMVMKPTVWGPALDDVLAAGDGDTDTLLVVPTPAGVPFTQATAERWAGEKRIVFACGRYEGIDQRVFDDAARRVRVEEVSIGDYVLIGGEAAVLVMTEAFVRLIPGVLGNQQSHQEDSFSDGLLEGPSYTRPATWRGLDVPPVLLSGDHAKVAAWRREQSLQRTAERR
type: DOMAIN
name: tRNA_MeTrfase_TRMD/TRM10
description: tRNA methyltransferase TRMD/TRM10-type domain
Protein sequence:
MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTESRQGIPLITGRFDPLAQLDEFSRSF

Annotated regions:
phrase: GERSFADIITSIRYWVIHSITIPSLFIA
type: DOMAIN
name: PSII_cyt_b559_N
description: Photosystem II cytochrome b559, N-terminal

phrase: ITSIRYWVIHSITI
type: CONSERVED_SITE
name: PSII_cyt_b559_CS
description: Photosystem II cytochrome b559, conserved site

phrase: LAYDVFGSPRPNEYFTESRQGIPLITGRFDPLAQLDE
type: DOMAIN
name: PSII_cytb559_asu_lum
description: Photosystem II cytochrome b559, alpha subunit, lumenal region
Protein sequence:
MLNRVVLVGRLTKDPELRYTPNGAAVATFTLAVNRTFTNQSGEREADFINCVTWRRQAENVANFLKKGSLAGVDGRLQTRNYENQQGQRVFVTEVQAESVQFLEPKNGGGSGSGGYNEGNSGGGQYFGGGQNDNPFGGNQNNQRRNQGNSFNDDPFANDGKPIDISDDDLPF

Annotated regions:
Protein sequence:
MTSGPRLAVLVLAAGSGTRMRSKTPKPLHKIAGRSMLEHAVRAAGELRPEHLVVVVGPQGQAVADEAVRVGGIVGAPVSTAVQPVPDGTGGAADVGLAAIPPDPDGSPFDGTVLVVYSDFPMLDGATLAQFLRSHHDSGADGSVLSRVVANPHGYGRILRSPRGALTGIVEERDATEEQRRVLEVNSGVYAVQASLLRAALPELGSANSQGERYLTDVVEIALGQGRAVIAVVAPDPVALEGCNDLVQLADLAAEFNRRILRAHMLAGVTVVDPATTWIDVGVRLEPDVRIEPGTQLKGETSVKAGAWIGPDTTLEDTLVGAGAIVSRTHSLSAIVGDNAQVGPFAYLRPGTVLGAESKIGTFVETKNAQIGVGSKIPHLTYAGDAVIGEHSNIGASSVFVNYDGVNKHTTVVGDHVRAGSDTMFVAPLTVGHGAYIGAGTVLKEDVPPGALAVSAGKQRNIPQWTIEKRAGTKSAEAAAEALGADEGEGTT

Annotated regions:
phrase: VLVLAAGSGTRMRSKTPKPLHKIAGRSMLEHAVRAAGELRPEHLVVVVGPQGQAVADEAVRVGGIVGAPVSTAVQPVPDGTGGAADVGLAAIPPDPDGSPFDGTVLVVYSDFPMLDGATLAQFLRSHHDSGADGSVLSRVVANPHGYGRILRSPRGALTGIVEERD
type: DOMAIN
name: MobA-like_NTP_Trfase
description: MobA-like NTP transferase

phrase: GVTVVDPATTWIDVGVRLEPDVRIEPGTQLKGETSVKAGAWIGPDTTLEDTLVGAGAIVSRTHSLSAIVGDNAQVGPFAYLRPGTVLGAESKIGTFVETKNAQIGVGSKIPHLTYAGDAVIGEHSNIGASSVFVNYDGVNKHTTVVGDHVRAGSDTMFVAPLTVGHGAYIGAGTVLKEDVPPGALAVSAGK
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain
Protein sequence:
MFEGYPVDTANTAGDQAVTNYTINFGPQHPAAHGVLRMVMELDGEIIERVDPHVGLLHRGTEKLIEYKTYLQALPYFDRLDYCSPLGMEHSYVLAIEKLLDLEVPARAQYLRTMFAELTRICNHMLNIGSHVMDVGAMTPNLWVFELREDCLNFFERASGARMHSAYFRPGGVHQDVPEKLLVDIGEWVETRLPKLFGDAMSLVIDNRIFKQRNVDIATVSKEDALAWGFSGPMIRGSGIAWDLRKSQPYDAYAAMEFDIPVGTRGDCYDRFMVRVEEVYQSAKIIKQCLRDMPTGPIASLDRKVVPPKRGEMKQSMESLIHHFKLYTEGFHVPAGEVYVATESPKGEFGVYLVSDGTNKPYRCKIRPTAFSHLQAMDMMSKGHMLADTTAIIGAIDVVFGECDR

Annotated regions:
phrase: LHRGTEKLIEY
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_49kDa_CS
description: NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site

phrase: DVGAMTPNLWVFELREDCLNFFERASGARMHSAYFRPGGVHQDVPEKLLVDIGEWVETRLPKLFGDAMSLVIDNRIFKQRNVDIATVSKEDALAWGFSGPMIRGSGIAWDLRKSQPYDAYAAMEFDIPVGTRGDCYDRFMVRVEEVYQSAKIIKQCLRDMPTGPIASLDRKVVPPKRGEMKQSMESLIHHFKLYTEGFHVPAGEVYVATESPKGEFGVYLVSDGTNKPYRCKIRPTAFSHLQAMDMMSKGHMLADTTAIIGAIDVVFGECD
type: DOMAIN
name: NADH_Q_OxRdtase_suD
description: NADH-quinone oxidoreductase, subunit D
Protein sequence:
MLEGDEKQSRALDFNRLEVLSLLGRGAKGVVFLVRDDDAKLLALKVILKEAIEKKKKGRESEDDEYKRVSFEQGVLSRFDHPLFPSLHGVLATDKVIGYAIDYCPGQNLNSLRKMQSESMFSDEIIRFYAAELVLALDYLHNQGIVYRDLKPDNVMIQENGHLMLIDFDLSTNLAPRTPQPSPSLSKPSPTMKRKKRLFRFTSFCNSGISPQESISVHSSSTLAVSDSSGEKSNSFVGTEEYVAPEVISGDGHDFAVDWWSLGVVLYEMLYGATPFRGSNRKETFYRILSKPPNLTGETTSLRDLIRRLLEKDPSRRINVEEIKGHDFFRGVDWEKVILVSRPPYIPAPDDGGDKGTDVNTKMDVENIVQEIFAARQEREKQSGDNNKNANMKIKDNTSGEWVKGLNNNHDLESDNNFLVF

Annotated regions:
phrase: LEVLSLLGRGAKGVVFLVRDDDAKLLALKVILKEAIEKKKKGRESEDDEYKRVSFEQGVLSRFDHPLFPSLHGVLATDKVIGYAIDYCPGQNLNSLRKMQSESMFSDEIIRFYAAELVLALDYLHNQGIVYRDLKPDNVMIQENGHLMLIDFDLSTNLAPRTPQPSPSLSKPSPTMKRKKRLFRFTSFCNSGISPQESISVHSSSTLAVSDSSGEKSNSFVGTEEYVAPEVISGDGHDFAVDWWSLGVVLYEMLYGATPFRGSNRKETFYRILSKPPNLTGETTSLRDLIRRLLEKDPSRRINVEEIKGHDF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: LEVLSLLGRGAKGVVFLVRDDDAKLLALKVILKEAIEKKKKGRESEDDEYKRVSFEQGVLSRFDHPLFPSLHGVLATDKVIGYAIDYCPGQNLNSLRKMQSESMFSDEIIRFYAAELVLALDYLHNQGIVYRDLKPDNVMIQENGHLMLIDFDLSTNLAPRTPQPSPSLSKPSPTMKRKKRLFRFTSFCNSGISPQESISVHSSSTLAVSDSSGEKSNSFVGTEEYVAPEVISGDGHDFAVDWWSLGVVLYEMLYGATPFRGSNRKETFYRILSKPPNLTGETTSLRDLIRRLLEKDPSRRINVEEIKGHDF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: IVYRDLKPDNVM
type: ACTIVE_SITE
name: Ser/Thr_kinase_AS
description: Serine/threonine-protein kinase, active site

phrase: RGVDWEKVILVSRPPYIPAPDDGGDKGTDVNTKMDVENIVQEIFAARQEREKQSGDNNKNANMKIKDNTSGEWVKGLNNNHDLESDNNFLV
type: DOMAIN
name: AGC-kinase_C
description: AGC-kinase, C-terminal

phrase: SGEKSNSFVGTEEYVAPEVISGDGHDFAVDWWSLGVVLYEMLYGATPFRGSNRKETFYRILSKPPNLTGETTSLRDLIRRLLEKDPSRRINVEEIKGHDF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: EVLSLLGRGAKGVVFLVRDDDAKLLALKVILKEAIEKKKKGRESEDDEYKRVSFEQGVLSRFDHPLFPSLHGVLATDKVIGYAIDYCPGQNLNSLRKMQSESMFSDEIIRFYAAELVLALDYLHNQGIVYRDLKPDNVMIQENGHLMLIDFDLSTNLAPR
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain
Protein sequence:
QVRPFLEVHERSACQARETLVSILQEYPDEISDIFRPSCVAVLRCSGCCTDESLKCTPVGKHTVDLQIMRVNPRTQSSKMEVMKFTEHTACECRPRRKQGEPDGPKEKPR

Annotated regions:
phrase: QVRPFLEVHERSACQARETLVSILQEYPDEISDIFRPSCVAVLRCSGCCTDESLKCTPVGKHTVDLQIMRVNPRTQSSKMEVMKFTEHTACECRPRR
type: DOMAIN
name: PDGF/VEGF_dom
description: PDGF/VEGF domain

phrase: CQARETLVSILQEYPDEISDIFRPSCVAVLRCSGCCTDESLKCTPVGKHTVDLQIMRVNPRTQSSKMEVMKFTEHTACE
type: DOMAIN
name: PDGF/VEGF_dom
description: PDGF/VEGF domain

phrase: SACQARETLVSILQEYPDEISDIFRPSCVAVLRCSGCCTDESLKCTPVGKHTVDLQIMRVNPRTQSSKMEVMKFTEHTACECRP
type: DOMAIN
name: PDGF/VEGF_dom
description: PDGF/VEGF domain

phrase: SACQARETLVSILQEYPDEISDIFRPSCVAVLRCSGCCTDESLKCTPVGKHTVDLQIMRVNPRTQSSKMEVMKFTEHTACECR
type: DOMAIN
name: PDGF/VEGF_dom
description: PDGF/VEGF domain

phrase: PSCVAVLRCSGC
type: CONSERVED_SITE
name: PD_growth_factor_CS
description: Platelet-derived growth factor, conserved site
Protein sequence:
MRVREMKKNYQHLWRWGILLLGLLMTCSVAEKKWVTVYYGVPVWKEANTTLFCASDAKAYKAEAHNIWATHACVPTDPNPQEIKLENVTEDFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTDASTKNMTKGMEGEIKNCTFNVTTVLRDKQKKVDALFYKLDVVQIDNSTQNGNSSNGNSSSYTLINCNTSAITQACTKINFEPIPIHYCAPAGFAILKCKDKMFKGTGKCYNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIIIRSENLINNAKTLIVHLNESIMINCTRPSNNTRHSLHLGPGKAFYTTDVIGDIRQAHCNISAKQWNNTLLRVAKNLTDLFNQTTISFAPSSGGDPEITTHSFNCGGEFFYCDTSKLFNSTWIRHNNTWNSTWKVEDENSTEIRNDTIVISCRIKQIINMWQEVGKAMYAPPIRGVINCTSNITGLLLLRDGGTNRTNETFRPGGGDMRDNWRSELYKYKVVRIEPLGIAPTRAKRRVVEREKRAIGLGAMFLGFLGAAGSTMGAASLTLTVQARQLLSGIVQQQNNLLRAIEVQQRLLQLTVWGIKQLQARILAVERYLQDQQLLGSWGCSGRHICTTTVPWNSSWSNKTLGDIWNNMTWMQWEKEIENYTGLIYNLIEESQTQQEKNEQELLELDKWASLWNWFSITQWLWYIKIFIMIVGGLIGLRIVFAVLSVVNRVRQGYSPLSLQTLLPVPREPDRPEETEEGGGEQGRDRSIRLVNGLSALIWDDLRNL

Annotated regions:
phrase: VQARQLLSGIVQQQNNLLRAIEVQQRLLQLTVWGIKQLQARILAVERYLQDQQLLGSWGCSGRHICTTTVPWNSSWSNKTLGDIWNNMTWMQWEKEIENYTGLIYNLIEESQTQQEKNEQELLELD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: GEIKNCTFNVTTVLRDKQKKVDALFYKLDVVQIDNSTQNGNSSNGNSSSYTLINCNTSAITQACTKINFEPIPIHYCAPAGFAILKCKDKMFKGTGKCYNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIIIRSENLINNAKTLIVHLNESIMINCTRPSNNTRHSLHLGPGKAFYTTDVIGDIRQAHCNISAKQWNNTLLRVAKNLTDLFNQTTISFAPSSGGDPEITTHSFNCGGEFFYCDTSKLFNSTWIRHNNTWNSTWKVEDENSTEIRNDTIVISCRIKQIINMWQEVGKAMYAPPIRGVINCTSNITGLLLLRDGGTNRTNETFRPGGGDMRDNWRSELYKYKVVRIEPLGIAPTRAKRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: KWVTVYYGVPVWKEANTTLFCASDAKAYKAEAHNIWATHACVPTDPNPQEIKLENVTEDFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTDASTKNM
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: MGAASLTLTVQARQLLSGIVQQQNNLLRAIEVQQRLLQLTVWGIKQLQARILAVERYLQDQQLLGSWGCSGRHICTTTVPWNSSWSNKTLGDIWNNMTWMQWEKEIENYTGLIYNLIEESQTQQEKNEQELLELDKWASLWNWFSITQWLWYIKIFIMIVGGLIGLRIVFAVLSVVNRVRQGYSPLSLQ
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like