nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MIKKIPAILVLEDGTYYKGWSFQADQSIVTIGEVVFNTGMTGYQEIITDPSYFQQIVTFTYPEIGNTGINSEDIESQTISIKGLVAKNICKISSSWRQQESLVQYLNRYKIPFIFGIDTRSLTQYLRRSGTMNGCISNKNLNHAYLQRKISEVPHMTGLDLIPNVTTNIMYDWDEKSLPSWYLADRNREKIYSQLKVIVIDFGVKLNILRRLATLGCQITVMPASTPTQDILSCKPDGILLSNGPGDPSAVNYGIKTVKELLNQNIPIFGICMGHQILNLALEAKTFKLKFGHRGINHPSGLKQQVEITSQNHGFAVDLQSVLKLSLQVTHFNLNDITVAGTGHSRSPYFSVQYHPESSPGPHDADYLFEYFIEIMKQFRKEAN

Annotated regions:
phrase: VIVIDFGVKLNILRRLATLGCQITVMPASTPTQDILSCKPDGILLSNGPGDPSAVNYGIKTVKELLNQNIPIFGICMGHQILNLALEAKTFKLKFGHRGINHPSGLKQQVEITSQNHGFAVDLQSVLKLSLQVTHFNLNDITVAGTGHSRSPYFSVQYHPESSPGPHDADYLFEYF
type: DOMAIN
name: CPSase_GATase1
description: Carbamoyl-phosphate synthase small subunit, GATase1 domain

phrase: IPAILVLEDGTYYKGWSFQADQSIVTIGEVVFNTGMTGYQEIITDPSYFQQIVTFTYPEIGNTGINSEDIESQTISIKGLVAKNICKISSSWRQQESLVQYLNRYKIPFIFGIDTRSLTQYLRRSGTMNGCI
type: DOMAIN
name: CarbamoylP_synth_ssu_N
description: Carbamoyl-phosphate synthase small subunit, N-terminal domain

phrase: LVLEDGTYYKGWSFQADQSIVTIGEVVFNTGMTGYQEIITDPSYFQQIVTFTYPEIGNTGINSEDIESQTISIKGLVAKNICKISSSWRQQESLVQYLNRYKIPFIFGIDTRSLTQYLRRSGTMNGC
type: DOMAIN
name: CarbamoylP_synth_ssu_N
description: Carbamoyl-phosphate synthase small subunit, N-terminal domain

phrase: VIDFGVKLNILRRLATLGCQITVMPASTPTQDILSCKPDGILLSNGPGDPSAVNYGIKTVKELLNQNIPIFGICMGHQILNLALEAKTFKLKFGHRGINHPSGLKQQVEITSQNHGFAVDLQSVLKLSLQVTHFNLNDITVAGTGHSRSPYFSVQYHPESSPGPHDADYLFEYFI
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase
Protein sequence:
MTIDKTFDPAAIEARWYAHWEDNGLFRPERPEAEPYTIVIPPPNVTGSLHIGHALDDTLQDVLIRHARLKGKDALWVVGTDHAGIATQMVVERQLDAKGQKRTDFTREQFIAKVWEWKEESGGTITRQLRRLGASCDWANERFTMDEGFSKAVLKVFVDLYNQGLLYRDKRLVNWDPGLKTAISDLEVETKEVQGSFWHFSYPLADGSGAISVATTRPETMLADMAVAVNPEDGRYRALIGKSVKLPITGRLIPIVADEHADPELGSGAVKITPGHDFNDFEVGKRAGFKPADMLNMLDAEAKVVQTADGLIPADYLGLDRFEARRKVVAAIEAEGRLEKVEDRVIQTPYGDRSNAVIEPWLTDQWYVDAETLAKPAIEAVRSGAIRVVPESWTKTYYNWLDNIQPWCVSRQLWWGHQIPAWYDADGQVYVAEDEAAASALAGGKALTRDSDVLDTWFSSALWPFGTIGWPDQAGQQPPEAYQAGAAGKASKLQRHYPNDVLISGFDILFFWDARMIMQGLHFMGEVPFRTLYLHGLVRAADGSKMSKSKGNTVDPLGLIDKYGADALRFTLTAMESQGRDIKLDEKRVEGYRNFATKLWNAARFAQGNGIGASTTIEPPAAELAVNRWIIAETVRTVQALDLAIADLRYDESANTIYQFVWASFCDWYLELIKPVLAEGADQGQAAETRAVAGWVLDQILVMLHPFMPFITEELWHALGRRDYDIIVAKWPMADARAIDPAAQQEIDWLIRMVGEVRAARTGLNVPPGARLPAYARGASEETRRRLAANAVAIARMARIDLAEGEAPAGGAAQVVVDEATYVLPLEGVIDLDAERARLAKGIAAAEKERDGLAARLGNPAFVEKAKPEAVEKARADHAEKSLEAEQLGAALARLG

Annotated regions:
phrase: LDEKRVEGYRNFATKLWNAARFAQGNGIGASTTIEPPAAELAVNRWIIAETVRTVQALDLAIADLRYDESANTIYQFVWASFCDWYLELIKPVLAEGADQGQAAETRAVAGWVLDQILVMLHPFMPFITEELWHA
type: DOMAIN
name: Anticodon_Ia_Val
description: Valyl tRNA synthetase, anticodon-binding domain

phrase: DLDAERARLAKGIAAAEKERDGLAARLGNPAFVEKAKPEAVEKARADHAEKSLEAEQLGAALARL
type: DOMAIN
name: Val-tRNA_synth_tRNA-bd
description: Valyl-tRNA synthetase, tRNA-binding arm

phrase: NRWIIAETVRTVQALDLAIADLRYDESANTIYQFVWASFCDWYLELIKPVLAEGADQGQAAETRAVAGWVLDQILVMLHPFMPFITEELWHALGRRDYDIIVAKWPMADARAIDPAAQQEIDWLIRMVGEVRAARTGLNVPPGARL
type: DOMAIN
name: M/V/L/I-tRNA-synth_anticd-bd
description: Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding

phrase: PNVTGSLHIGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: WYAHWEDNGLFRPERPEAEPYTIVIPPPNVTGSLHIGHALDDTLQDVLIRHARLKGKDALWVVGTDHAGIATQMVVERQLDAKGQKRTDFTREQFIAKVWEWKEESGGTITRQLRRLGASCDWANERFTMDEGFSKAVLKVFVDLYNQGLLYRDKRLVNWDPGLKTAISDLEVETKEVQGSFWHFSYPLADGSGAISVATTRPETMLADMAVAVNPEDGRYRALIGKSVKLPITGRLIPIVADEHADPELGSGAVKITPGHDFNDFEVGKRAGFKPADMLNMLDAEAKVVQTADGLIPADYLGLDRFEARRKVVAAIEAEGRLEKVEDRVIQTPYGDRSNAVIEPWLTDQWYVDAETLAKPAIEAVRSGAIRVVPESWTKTYYNWLDNIQPWCVSRQLWWGHQIPAWYDADGQVYVAEDEAAASALAGGKALTRDSDVLDTWFSSALWPFGTIGWPDQAGQQPPEAYQAGAAGKASKLQRHYPNDVLISGFDILFFWDARMIMQGLHFMGEVPFRTLYLHGLVRAADGSKMSKSKGNTVDPLGLIDKYGADALRFTLTAMESQGRDIKL
type: DOMAIN
name: aa-tRNA-synth_Ia
description: Aminoacyl-tRNA synthetase, class Ia
Protein sequence:
MGKIRVGLIFGGQSSEHEVSLQSARNILQAIDGERFEVSLIGVDKQGRWHASQASNFLLNADDPGRIALRESGENLALVPGECSGQLQTAANAHPLAQIDVAFPIVHGTLGEDGSLQGLLRMANIPFVGAGVLGSAVCMDKDVAKRLLRDAGLKVAPFVSLTRSKAAGADLSAIVEQLGLPLFVKPANQGSSVGVSKVKREADLRAALDEAFRYDHKVLVEQAVIGREIECAVLGNERPRASGCGEIVLSDEFYAYDTKYLNEDGARVAVPADIPDEACQRIRGIAIEAFQALECSGMARVDVFLTPDGEVVINELNTLPGFTNISMYPKLWQAAGMSYRELITALIELALEKGRMDEALSRSCQY

Annotated regions:
phrase: RVGLIFGGQSSEHEVSLQSARNILQAIDGERFEVSLIGVDKQGRWHASQASNFLLNADDPGRIALRESGENLALVPGECSGQLQTAANAHPLAQIDVAFPIVHGTLGEDGSLQGLLRMANIPFVG
type: DOMAIN
name: Dala_Dala_lig_N
description: D-alanine--D-alanine ligase, N-terminal domain

phrase: HGTLGEDGSLQ
type: CONSERVED_SITE
name: D-Ala_lig_Van_CS
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site

phrase: LLRDAGLKVAPFVSLTRSKAAGADLSAIVEQLGLPLFVKPANQGSSVGVSKVKREADLRAALDEAFRYDHKVLVEQAVIGREIECAVLGNERPRASGCGEIVLSDEFYAYDTKYLNEDGARVAVPADIPDEACQRIRGIAIEAFQALECSGMARVDVFLTPDGEVVINELNTLPGFTNISMYPKLWQAAGMSYRELITALI
type: DOMAIN
name: Dala_Dala_lig_C
description: D-alanine--D-alanine ligase, C-terminal

phrase: KRLLRDAGLKVAPFVSLTRSKAAGADLSAIVEQLGLPLFVKPANQGSSVGVSKVKREADLRAALDEAFRYDHKVLVEQAVIGREIECAVLGNERPRASGCGEIVLSDEFYAYDTKYLNEDGARVAVPADIPDEACQRIRGIAIEAFQALECSGMARVDVFLTPDGEVVINELNTLPGFTNISMYPKLWQAAGMSYRELITALI
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold

phrase: LECSGMARVDVFLTPDGEVVINELNTLP
type: CONSERVED_SITE
name: D-Ala_lig_Van_CS
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site
Protein sequence:
MLKVWEPQAFLEFLNRRRTEFYPEIEAQVRAILERVRREGDGALYAFTRQFDGADLEATGLRVTEAEYREAEAAVSAAFRAALQVAVENIAAFHRPQVPTSWFTTRPDGTIVGQRVTPVDRAGVYVPGGSAPLFSCLLMTAIPAVVAGVPEVIVCTPPDRNGRIDPHMLVAARAAGVKDVYKVGGAQAIGAMAYGTATVPRVDKIAGPGNYYVTLAKKLVFGPVGIDMLAGPTEVMAVDDGSVDAEWLAADLLSQAEHPNGMVILVTTAGPERIAAVGAAMARHTAALPRAETIRRSVAELGAALAVDTLEEAADLVNAVGPEHLEVGVADPWAFLPLVRHAGSIFLGRWTPEAMGDYIAGPSNVIPTEGTARYASPVCVETFIKRSAVTCYSEAAFRAQAPHAVRLALTEDLLAHAASMQIRLAKPDGESPSEGREAG

Annotated regions:
phrase: IDMLAGPTEVMAVDDGSVDAEWLAADLLSQAE
type: CONSERVED_SITE
name: Histidinol_DH_CS
description: Histidinol dehydrogenase, conserved site
Protein sequence:
MSDAFVELLDEMIERLLNYKPGSRTLPNVIKLCQTLGLESFVDQVDSTKSRLSIASNIVVIDIDYENEMETILDVKLVLASNFDKFNYFNEKGENILLTSLSDVQDLKAFHHNLNFLVFLDSFSNIDIESGHTSLDLFKYYTDLPKMLQDYISDQHLPFTVKMNENSTFGVSIYDAQGQTKIMTVDLEKAPNSDRSFYEYVYDSKLKDWLNESSDASTQGINLVFKFEELVAFPETWLTTEIQMNETPKKFELPQQSHLKHTVKLQNELTSDLLLMDSFRISNEDIALLPDFLKWYNWHKIVLQEVLKLIIHDNVTSSISTSNSGSVQPKPRRKSSVLSNRRPSMTDSMMLRDSGIPEFTLKEILDQPVISDTEDDDQMDVDKEKQIPIVLNEEYIYIGKAQTCSYNDNDEQAWKAFIDYLKSKLI

Annotated regions:
phrase: DEMIERLLNYKPGSRTLPNVIKLCQTLGLESFVDQVDSTKSRLSIASNIVVIDIDYENEMETILDVKLVLASNFDKFNYFNEKGENILLTSLSDVQDLKAFHHNLNFLVFLDSFSNIDIESGHTSLDLFKYYTDLPKMLQD
type: DOMAIN
name: Mediator_Med1
description: Mediator complex, subunit Med1
Protein sequence:
MTQISPLQKARASYMPKLPPVLNESGPFAKAVRGEATQSVADQAAIKALFPDTYGLPAIQFKNGPQHDAKPVNVAVILSGGQAPGGHNVIAGLYDGIKALNPNSKLYGFLGGPSGLIDNKYMVIDEDVVNAYRNTGGFDMICSGRTKLEEPEQFDKVIANCKALGINAIVIIGGDDSNTNACVLAQYMITKKTGIQVIGCPKTIDGDLKNEWIEVSFGFDTATKVYSELIGNIMRDANSARKYWHFIKLMGRSASHIALECALQTHPTACIISEEVEKKGTSLHDIVDKLTKLVIARSAKKMDFGVVLIPEGLIEFIPEIKPLIKELNECLAEGTDLGKKFNALTDMDAKIAFVVDHLSASSASVFKSFPNFVKAQLLGDRDPHGNVQVSRIETEKLLIAMVEENVKAANKANGTKVKFSSQAHFFGYEGRCAAPSNFDADYCYSLGFNASALIGAGLTGYMSSVRNVAQPATAWEAGGIPLTMMMNMERRHGKDVPVIRKALVELDAAPFKMFAKHRDAWAEGVDFVYPGPIQYFGPAEVCDRTTMTLQLERA

Annotated regions:
phrase: NVAVILSGGQAPGGHNVIAGLYDGIKALNPNSKLYGFLGGPSGLIDNKYMVIDEDVVNAYRNTGGFDMICSGRTKLEEPEQFDKVIANCKALGINAIVIIGGDDSNTNACVLAQYMITKKTGIQVIGCPKTIDGDLKNEWIEVSFGFDTATKVYSELIGNIMRDANSARKYWHFIKLMGRSASHIALECALQTHPTACIISEEVEKKGTSLHDIVDKLTKLVIARSAKKMDFGVVLIPEGLIEFIPEIKPLIK
type: DOMAIN
name: Phosphofructokinase_dom
description: Phosphofructokinase domain
Protein sequence:
MSAQSLPAATPPTLKPPRIIRPRPPSRHRAPHSPGPLHNGSSPKALPQISNDASASVCTSIFWEPPTASLKPPALLPPSVSRTSLDSQTSPDSPSSTPSPSPVSRRSISPEPAPCSPVPPPKPSGSSRTPLPSGPTPLQDGSASAPGTVRRLAGKFEWGAEGKAQSSDSLERCSQGSTEVNGEKETPEAALSGNGSQENGTPDAALACPPCCPCVCHVAKPGLELRWVPVGSSEDILRIPCRASPLRASRSRINPPVISHPPVVLTSYRSTAERKLLPPLKPPKPTKVRQDISTSEELPQPDLKLPSEDGIQTATKAWEGDRPEGAPLNAPPVALEGREEEGLDGLKGLQWELPLQDEPLYQTYRAAVLSEELWGVGEDGGPSPANPGEAPTFSRLPGPRNTLWQELPAVRGSGLLESLSPQERRMQESLFEVVTSEASYLRSLRLLTDTFVLSQALRDTLTPRDHHTLFSNVQRVQSVSERFLGTLLSRVRSSPHITDLCDVVHAHAVGPFFVYVDYVRNQQYQEETYSRLMDTNVRFSAELRRLQSLPKCERLPLPSFLLLPFQRITRLRMLLQNILSQTEEGSSRQENAQKALGAVSKIIERCSAEVGRMKQTEELIRLTQRLRFHKVKALPLVSWSRRLELQGELTELGCRRGGVLFTSRPRFTPLCLLLFSDLLLITQPKSGQRLQVLDYAHRSLVQAQQVPDPSGPPTFRLSLLSNHQGRPTHRLLQAASLSDMQRWLGAFPTPGPLPCSPDTIYEDCECSQELCSEPSTPSKTEGQSLESKAPRKHLHKNPEGWLKGLPGAFPAQLVCEVTGEHERRKHLRQHQKLLEAVGPSSGTPDTPQP

Annotated regions:
phrase: SLFEVVTSEASYLRSLRLLTDTFVLSQALRDTLTPRDHHTLFSNVQRVQSVSERFLGTLLSRVRSSPHITDLCDVVHAHAVGPFFVYVDYVRNQQYQEETYSRLMDTNVRFSAELRRLQSLPKCERLPLPSFLLLPFQRITRLRMLLQNILSQTEEGSSRQENAQKALGAVSKIIERCS
type: DOMAIN
name: DH_dom
description: Dbl homology domain

phrase: MQESLFEVVTSEASYLRSLRLLTDTFVLSQALRDTLTPRDHHTLFSNVQRVQSVSERFLGTLLSRVRSSPHITDLCDVVHAHAVGPFFVYVDYVRNQQYQEETYSRLMDTNVRFSAELRRLQSLPKCERLPLPSFLLLPFQRITRLRMLLQNILSQTEEGSSRQENAQKALGAVSKIIER
type: DOMAIN
name: DH_dom
description: Dbl homology domain

phrase: KVKALPLVSWSRRLELQGELTELGCRRGGVLFTSRPRFTPLCLLLFSDLLLITQPKSGQRLQVLDYAHRSLVQAQQVPDPSGPPTFRLSLLSNHQGRPTHRLLQAASLSDMQRWLGAFPT
type: DOMAIN
name: PH_ephexin
description: Ephexin-like, PH domain

phrase: LFEVVTSEASYLRSLRLLTDTFVLSQALRDTLTPRDHHTLFSNVQRVQSVSERFLGTLLSRVRSSPHITDLCDVVHAHAVGPFFVYVDYVRNQQYQEETYSRLMDTNVRFSAELRRLQSLPKCERLPLPSFLLLPFQRITRLRMLLQNILSQTEEGSSRQENAQKALGAVSKIIER
type: DOMAIN
name: DH_dom
description: Dbl homology domain

phrase: RMQESLFEVVTSEASYLRSLRLLTDTFVLSQALRDTLTPRDHHTLFSNVQRVQSVSERFLGTLLSRVRSSPHITDLCDVVHAHAVGPFFVYVDYVRNQQYQEETYSRLMDTNVRFSAELRRLQSLPKCERLPLPSFLLLPFQRITRLRMLLQNILSQTEEGSSRQENAQKALGAVSKIIERCSA
type: DOMAIN
name: DH_dom
description: Dbl homology domain
Protein sequence:
MAKTAKSKQSVDVADLTKAQAKVEWKRLALELETHDRLYYQEDAPKISDAAYDELRRRFNAIEKRFPELVSRDSPSQTVGAAPSGRFKKVRHAVPMLSLDNAFAEEDVRDFVGRIARFLKLAEDDRIAFSAEPKIDGLSMSLRYEGGQLVTAATRGDGAEGEDVTANIRTLKDVPQKLHGRNLPDICEIRGEVYMTKQAFLALNERQKEAGDTIFANPRNSAAGSLRQKDPTITASRPLGFFAYAWGDMSAMPAETQSGMIKWFEHCGFTTNPLTKLCHSVEELIAFHRAIEEQRAELDYDIDGVVYKVDRIDWQERLGFVSRTPRWGIAHKFPAERAMTVLKDIEIQVGRTGSFTPVGKLEPVGVGGVIVQNVTLHNEDYIKGIGNKGEVLREGRDIRIGDTVVIQRAGDVIPQVVDVLIDKRPADAEVFAFPRKCPCPLHTDVVREETAAGEEGSRARCTGEFACPYQKIEHLKLFASRRAFDIDGLGEKQIQFFFDEGWVKEPADIFTLQKRNAKLKLEEVEGYGETSVRNLFNAIEARREMALERFIYALGMRYVGETTALALARGYGSWEAFHDACLKVANGDEEAIAEMDALDQIGETVIKSVAAYFGEDHNRGIVERLTREVKILDAEKPKRNSPIATKTVVFTGTLEKMTRDEAKATAERLGAKVSGSVSKKTDYVVAGPGAGSKLKDAEKHGVKVLTEDEWLQLIGE

Annotated regions:
phrase: EWKRLALELETHDRLYYQEDAPKISDAAYDELRRRFNAIEKRFPELVSRDSPSQTVGAAPSGRFKKVRHAVPMLSLDNAFAEEDVRDFVGRIARFLKLAEDDRIAFSAEPKIDGLSMSLRYEGGQLVTAATRGDGAEGEDVTANIRTLKDVPQKLHGRNLPDICEIRGEVYMTKQAFLALNERQKEAGDTIFANPRNSAAGSLRQKDPTITASRPLGFFAYAWGDMSAMPAETQSGMIKWFEHCGFTTNPLTKLCHSVEELIAFHRAIEEQRAELDYDIDGVVYKVDRIDWQERLGFVSRTPRWGIAHKFP
type: DOMAIN
name: DNAligase_adenylation
description: NAD-dependent DNA ligase, adenylation

phrase: NSPIATKTVVFTGTLEKMTRDEAKATAERLGAKVSGSVSKKTDYVVAGPGAGSKLKDAEKHGVKVLTEDEWLQLI
type: DOMAIN
name: BRCT_dom
description: BRCT domain

phrase: RFKKVRHAVPMLSLDNAFAEEDVRDFVGRIARFLKLAEDDRIAFSAEPKIDGLSMSLRYEGGQLVTAATRGDGAEGEDVTANIRTLKDVPQKLHGRNLPDICEIRGEVYMTKQAFLALNERQKEAGDTIFANPRNSAAGSLRQKDPTITASRPLGFFAYAWGDMSAMPAETQSGMIKWFEHCGFTTNPLTKLCHSVEELIAFHRAIEEQRAELDYDIDGVVYKVDRIDWQERLGFVSRTPRWGIAHKFPA
type: DOMAIN
name: DNAligase_adenylation
description: NAD-dependent DNA ligase, adenylation

phrase: QAKVEWKRLALELETHDRLYYQEDAPKISDAAYDELRRRFNAIEKRFPELVSRDSPSQTVGAAPSGRFKKVRHAVPMLSLDNAFAEEDVRDFVGRIARFLKLAEDDRIAFSAEPKIDGLSMSLRYEGGQLVTAATRGDGAEGEDVTANIRTLKDVPQKLHGRNLPDICEIRGEVYMTKQAFLALNERQKEAGDTIFANPRNSAAGSLRQKDPTITASRPLGFFAYAWGDMSAMPAETQSGMIKWFEHCGFTTNPLTKLCHSVEELIAFHRAIEEQRAELDYDIDGVVYKVDRIDWQERLGFVSRTPRWGIAHKFPAERAMTVLKDIEIQVGRTGSFTPVGKLEPVGVGGVIVQNVTLHNEDYIKGIGNKGEVLREGRDIRIGDTVVIQRAGDVIPQVVDVLIDKRPADAEVFAFPRKCPCPLHTDVVREETAAGEEGSRARCTGEFACPYQKIEHLKLFASRR
type: DOMAIN
name: DNAligase_N
description: NAD-dependent DNA ligase, N-terminal

phrase: KIDGLSMSLRYEGGQLVTAATRGDGAEGE
type: ACTIVE_SITE
name: DNA_ligase_AS
description: NAD-dependent DNA ligase, active site

phrase: KRNSPIATKTVVFTGTLEKMTRDEAKATAERLGAKVSGSVSKKTDYVVAGPGAGSKLKDAEKHGVKVLTEDEW
type: DOMAIN
name: BRCT_dom
description: BRCT domain

phrase: ATKTVVFTGTLEKMTRDEAKATAERLGAKVSGSVSKKTDYVVAGPGAGSKLKDAEKHGVKVLTEDEWLQL
type: DOMAIN
name: BRCT_dom
description: BRCT domain

phrase: RFIYALGMRYVGETTALALARGYGSWEAFHDACLKVANGDEEAIAEMDALDQIGETVIKSVAAYFGEDHNRGI
type: DOMAIN
name: DisA/LigA_HHH
description: DisA/LigA, helix-hairpin-helix motif

phrase: TVLKDIEIQVGRTGSFTPVGKLEPVGVGGVIVQNVTLHNEDYIKGIGNKGEVLREGRDIRIGDTVVIQRAGDVIPQVVDVLIDKRPA
type: DOMAIN
name: NAD_DNA_ligase_OB
description: NAD-dependent DNA ligase, OB-fold
Protein sequence:
MGIVIAVYGKGGIGKSTNSANLSTALAMKGASVLQIGCDPKHDSTFPITGHLQKTVIEVLEEVGFHHEEVMFEDVVKKGFANVDAIEAGGPPAGSGCGGYVVGETVKLLQEFGVYDKYDVILFDVLGDVVCGGFSAPLNYADYALIVATNDFDSIFAANRLCMAIEQKSARSKVQLAGIIGNKVDYVNGGGTNVLDKFADKVNTKVVAKVPMHDLIRRSRLAGKTLFQMEEDGQDVCIAPYLALAEQLLSEKPFATVPKSLGDREIFELMGGWM

Annotated regions:
phrase: EAGGPPAGSGCG
type: CONSERVED_SITE
name: NifH/chlL_CS
description: NifH/chlL conserved site

phrase: DVLGDVVCGGFSA
type: CONSERVED_SITE
name: NifH/chlL_CS
description: NifH/chlL conserved site
Protein sequence:
MVLKRKGLLIILDGLGDRPIKELNGLTPLEYANTPNMDKLAEIGILGQQDPIKPGQPAGSDTAHLSIFGYDPYETYRGRGFFEALGVGLDLSKDDLAFRVNFATLENGIITDRRAGRISTEEAHELARAIQEEVDIGVDFIFKGATGHRAVLVLKGMSRGYKVGDNDPHEAGKPPLKFSYEDEDSKKVAEILEEFVKKAQEVLEKHPINERRRKEGKPIANYLLIRGAGTYPNIPMKFTEQWKVKAAGVIAVALVKGVARAVGFDVYTPEGATGEYNTNEMAKAKKAVELLKDYDFVFLHFKPTDAAGHDNKPKLKAELIERADRMIGYILDHVDLEEVVIAITGDHSTPCEVMNHSGDPVPLLIAGGGVRTDDTKRFGEREAMKGGLGRIRGHDIVPIMMDLMNRSEKFGA

Annotated regions:
phrase: KGLLIILDGLGDRPIKELNGLTPLEYANTPNMDKLAEIGILGQQDPIKPGQPAGSDTAHLSIFGYDPYETYRGRGFFEALGVGLDLSKDDLAFRVNFATLENGIITDRRAGRISTEEAHELARAIQEEVDIGVDFIFKGATGHRAVLVLKGMSRGYKVGDNDPHEAGKPPLKFSYEDEDSKKVAEILEEFVKKAQEVLEKHPINERRRKEGKPIANYLLIRGAGTYPNIPMKFTEQWKVKAAGVIAVALVKGVARAVGFDVYTPEGATGEYNTNEMAKAKKAVELLKDYDFVFLHFKPTDAAGHDNKPKLKAELIERADRMIGYILDHVDLEEVVIAITGDHSTPCEVMNHSGDPVPLLIAGGGVRTDDTKRFGEREAMKGGLGRIRGHDIVPIMM
type: DOMAIN
name: Metalloenzyme
description: Metalloenzyme
Protein sequence:
MGSYMNKTSVVKVGNVLIGGDNPVVVQSMTDTYTADVEKTVKQILALHKAGSEIVRITVNDESAAAAVPEIVKELAKHDCHVPLVGDFHYNGHTLLSKYPECAKALAKYRINPGNVGFGKKKDTQFAEIIKIAIANDKPVRIGVNWGSLDQALLARLIDENNAQENPLSLQQIMHKALITSALESAKYAEELGLAKDKIIISCKVSEVQDLIAVYQKLAKECGYALHLGLTEAGMGTKGIVASAVSLGILLQQGIGNTIRVSLTPAPNAPRTEEVRVCREILQNLGMRTFTPSVTSCPGCGRTTSSFFRELTSKVKDHLDEKMHTWKEQYHGVEAMKVAVMGCVVNGPGESKNADIGISLPGSGESPVAPVFIDGKKAHTLRGDNISEEFIEIVENYVKNRYGKK

Annotated regions:
Protein sequence:
MERLPLSPAVLFLIIVLPILYLWIRYTAPARPHGKHLSLPPGPPRLPKIGNLHQVPRQIPWKKYKEWSDTYGPIMSVQLADTIAVVFSSWDLIKNHIERRNTIYSSRPSVPFFLHATGGLNASILPYGPEWKLQRAIRSSVLKPSMTVKYRDVQHVETTQLLHELLSTNDFPVCLRRCIASVFLTVAYGERCVDHAGLEAIDRLEELNRAIALHAEALFSGAAGILTQLVLPKALVDRLPVRWKKDADMLHNRLTADLVARTRAALVRPGWNWVKEFSMKDGIGSGDGDGEQGSKVELKRLAYMVGSLYEASMAASQALRVIILAGLLHPDATRRMHDELDAVVGTGRLPDFHDAAQLPYTQAFIKEAMRWRSLTPMGSPRATSDEDECRGYHIPCGATVLVNVWAINHDEAIFLDPFAFQPERWIENPDLPQLMYGMGQRACPGRHMGQDSLFLATARLFWAFDMALPDGADPIDQERFLDSGTTLAAFLPDFEVRFTPRSEKYQEVIENSMAVLPDVLSISATP

Annotated regions:
Protein sequence:
MSSDEASSEALAQEDIKQITLRIKLPACISNEEDLEVPSLLSETLADIRETLNLSAATQNLTNFNVFYQDINLSENFDDLVPLNDILTELGVGEIDSLNLVLKEKPYNLAAIYDHLNKFREVIGLHFLDKYSSEVGVLSGVSKFGDIDLQDVKETEPETQDDKDKETDETKSTKEDSNQTEEKKSEIVFTAEEKQQIGKITDELISGNTPSLVEFGTFDNISGSIKTPIKSLTVSQWSPVPSFQKLKGDLLYITLQTLENETLNITCHLSGFFVNKSSTINFNPAIKMNENGKVHKDYLLINLVDSLSPSFSKTIQENELVLSRSSKHPESFLIPSNSLMSSPWIVNPSKFANQPDASRSQLPLISNGVDGSGFVKEWNEDFQAIRELPNSTINERILREKLLMKSLHEFNKVATETAMNVIKGNLTPLNPNEPKDYHIYLRNGIFYSLGVNATGAFDCTGGNEAARYTSSKDLAAIKLLNRIDAKGIYNLVTCIVDYMGQRVICQAPVPGILDSSHEDENEEEPTDKVCYGLSTDGSKIFSDSSFENVLKPIAEAFHLKPHPVTLLDNVKSQGDLITSKDIKGVKGTDERKYIIDLYRATPLDIEFIESNWDESKETSYPHRETALRHEAVEEWWKRKVSVLFKAETERLEKEGKLESKDGEKPQIVLPSDQITINTDAFTTIDESSDDQNEVREVSKFIKEHLIEEFLEENSKQISPFDGNHLTSMLHKQGINLRYLGHIAEQACVRKDEHLKKITEARKVNEEEI

Annotated regions:
phrase: FANQPDASRSQLPLISNGVDGSGFVKEWNEDFQAIRELPNSTINERILREKLLMKSLHEFNKVATETAMNVIKGNLTPLNPNEPKDYHIYLRNGIFYSLGVNATGAFDCTGGNEAARYTSSKDLAAIKLLNRIDAKGIYNLVTCIVDYMGQRVICQAPVPGILDSSHEDENEEEPTDKVCYGLSTDGSKIFSDSSFENVLKPIAEAFHLKPHPVTLLDNVKSQGDLITSKDIKGVKGTDERKYIIDLYRATPLDIEF
type: DOMAIN
name: CLU_dom
description: CLU domain

phrase: SETLADIRETLNLSAATQNLTNFNVFYQDINLSENFDDLVPLNDILTELGVGEIDSLNLVLKEKPYNLAAIYDHLNKFREV
type: DOMAIN
name: CLU_N
description: Clustered mitochondria protein, N-terminal

phrase: ISPFDGNHLTSMLHKQGINLRYLGHIAEQACVRKDEHLKKI
type: DOMAIN
name: CLU-central
description: CLU central domain

phrase: EWNEDFQAIRELPNSTINERILREKLLMKSLHEFNKVATETAMNVIKGNLTPLNPNEPKDYHIYLRNGIFYSLGVNATGAFDCTGGNEAARYTSSKDLAAIKLLNRIDAKGIYNLVTCIVDYMGQRVICQAPVPGILDSSHEDENEEEPTDKVCYGLSTDGSKIFSDSSFENVLKPIAEAFHLKPHPVTLLDNVKSQGDLITSKDIKGVKGTDERKYIIDLYRATPLDIE
type: DOMAIN
name: CLU_dom
description: CLU domain
Protein sequence:
MSTSDFEERVVTVPLRDVSAVPTHERAGRAMTLIREHLAQHFRVDESDIRLDPSLNETVWARGSQNPPSKLRVRAARFDEDGESIVEAEPAE

Annotated regions:
phrase: IRLDPSLNETVWAR
type: CONSERVED_SITE
name: Ribosomal_eL31_CS
description: Large ribosomal subunit protein eL31, conserved site
Protein sequence:
MADAEARAEFPEEARPDRGTLQVLQDMASRLRIHSIRATCSTSSGHPTSCSSSSEIMSVLFFYIMRYKQSDPENPDNDRFVLAKRLSFVDVATGWLGQGLGVACGMAYTGKYFDRASYRVFCLMSDGESSEGSVWEAMAFASYYSLDNLVAIFDVNRLGHSGALPAEHCINIYQRRCEAFGWNTYVVDGRDVEALCQVFWQASQVKHKPTAVVAKTFKGRGTPSIEDAESWHAKPMPRERADAIIKLIESQIQTSRNLDPQPPIEDSPEVNITDVRMTSPPDYRVGDKIATRKACGLALAKLGYANNRVVVLDGDTRYSTFSEIFNKEYPERFIECFMAEQNMVSVALGCASRGRTIAFASTFAAFLTRAFDHIRIGGLAESNINIIGSHCGVSVGDDGASQMALEDIAMFRTIPKCTIFYPTDAVSTEHAVALAANAKGMCFIRTTRPETMVIYTPQERFEIGQAKVLRHCVSDKVTVIGAGITVYEALAAADELSKQDIFIRVIDLFTIKPLDVATIVSSAKATEGRIITVEDHYPQGGIGEAVCAAVSMDPDIQVHSLAVSGVPQSGKSEELLDMYGISARHIIVAVKCMLLN

Annotated regions:
phrase: IATRKACGLALAKLGYANNRVVVLDGDTRYSTFSEIFNKEYPERFIECFMAEQNMVSVALGCASRGRTIAFASTFAAFLTRAFDHIRIGGLAESNINIIGSHCGVSVGDDGASQMALEDIAMFRTIPKCTIFYPTDAVSTEHAVALAANAKGMCFIRTTRPETM
type: DOMAIN
name: Transketolase-like_Pyr-bd
description: Transketolase-like, pyrimidine-binding domain

phrase: FVDVATGWLGQGLGVACGMAYTGKYFDRASYRVFCLMSDGESSEGSVWEAMAFASYYSLDNLVAIFDVNRLGHSGALPAEHCINIYQRRCEAFGWNTYVVDGRDVEALCQVFWQASQVKHKPTAVVAKTFKGRGTPSIEDAESWHAKPMPR
type: DOMAIN
name: Transketolase_N
description: Transketolase, N-terminal

phrase: KIATRKACGLALAKLGYANNRVVVLDGDTRYSTFSEIFNKEYPERFIECFMAEQNMVSVALGCASRGRTIAFASTFAAFLTRAFDHIRIGGLAESNINIIGSHCGVSVGDDGASQMALEDIAMFRTIPKCTIFYPTDAVSTEHAVALAANAKGMCFIRTTRPE
type: DOMAIN
name: Transketolase-like_Pyr-bd
description: Transketolase-like, pyrimidine-binding domain

phrase: GDDGASQMALEDIAMF
type: BINDING_SITE
name: Transketolase_BS
description: Transketolase binding site

phrase: QAKVLRHCVSDKVTVIGAGITVYEALAAADELSKQDIFIRVIDLFTIKPLDVATIVSSAKATEGRIITVEDHYPQGGIGEAVCAAVSMDPDIQVHSLAVSGVPQSGKSEELLDMYGISARH
type: DOMAIN
name: Transketolase_C
description: Transketolase, C-terminal domain
Protein sequence:
MGQKGCPIGFRTAVTKKWRSLWYGNNQEFGKFLIEDVKIREFLKKKPSCQGAAGFVVKRMSGKIEVTIHTARPGLVIGKKGAEVESLKAELKKLTGKDVWVEIAEVKRPELNAQLVADGIAKQIERRVSFRRAMKKALQSVMDAGALGVKVQVSGRLAGAEIARSEWYKNGRVPLHTLRADIDYATASAETTYGIIGIKVWINLSEKKAVPAANHAGAASTAAA

Annotated regions:
phrase: IAKQIERRVSFRRAMKKALQSVMDAGALGVKVQVSGRLAGAEIARSEWYKNGRVPLHTLRADIDYATASAETTYGIIGIKVW
type: DOMAIN
name: Ribosomal_uS3_C
description: Small ribosomal subunit protein uS3, C-terminal

phrase: IREFLKKKPSCQGAAGFVVKRMSGKIEVTIHTARPGLVIGKKGAEVESLKAELKKLTGKDVWVEIAEV
type: DOMAIN
name: KH_dom_type_2
description: K Homology domain, type 2

phrase: ARSEWYKNGRVPLHTLRADIDYATASAETTYGII
type: CONSERVED_SITE
name: Ribosomal_uS3_CS
description: Small ribosomal subunit protein uS3, conserved site

phrase: KIREFLKKKPSCQGAAGFVVKRMSGKIEVTIHTARPGLVIGKKGAEVESLKAELKKLTGKDVWVEIAEVKRPE
type: DOMAIN
name: KH_dom_type_2
description: K Homology domain, type 2

phrase: MSGKIEVTIHTARPGLVIGKKGAEVESLKAELKKLTGKDVWVEIAEVKRPELNAQLVADGIAKQI
type: DOMAIN
name: KH_dom
description: K Homology domain
Protein sequence:
MKPFPTHPDAIPAELQDVMDRLGTVAIEVANRIARGGIDEDLAGLCGTNTDGDGQKALDVIADDAFRAALEGSAVRFYASEEQDTAVTLNEAGTLALAIDPLDGSSNIDTNLSVGTIFAIWPAAATAEASFLRQGSELIAAGYVIYGPQVCMMVSFGKGTQKYVLDPGSRSFVLVDRAVKVPPSSTEFAINASNYRHWPKPIRAYIDDCVAGTEGPRGRNFNMRWLASLVAETHRILARGGVFLYPRDSRKGYEQGRLRYLYECAPIAFVITQAGGGATDGENPILGQTPSRLHARTPFVFGSAEKVARITAYHDLPEQETSALFGNRGLFRS

Annotated regions:
phrase: ELQDVMDRLGTVAIEVANRIARGGIDEDLAGLCGTNTDGDGQKALDVIADDAFRAALEGSAVRFYASEEQDTAVTLNEAGTLALAIDPLDGSSNIDTNLSVGTIFAIWPAAATAEASFLRQGSELIAAGYVIYGPQVCMMVSFGKGTQKYVLDPGSRSFVLV
type: DOMAIN
name: FBPase_N
description: Fructose-1-6-bisphosphatase class I, N-terminal

phrase: PPSSTEFAINASNYRHWPKPIRAYIDDCVAGTEGPRGRNFNMRWLASLVAETHRILARGGVFLYPRDSRKGYEQGRLRYLYECAPIAFVITQAGGGATDGENPILGQTPSRLHARTPFVFGSAEKVARITAY
type: DOMAIN
name: FBPase_C_dom
description: Fructose-1-6-bisphosphatase class 1, C-terminal

phrase: GRLRYLYECAPI
type: ACTIVE_SITE
name: Fructose_bisphosphatase_AS
description: Fructose-1,6-bisphosphatase, active site
Protein sequence:
MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQILYRAMKKIQQKTETNPLSVLHQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMVFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR

Annotated regions:
phrase: NRLVNMLVNRILKHGKKSLAYQILYR
type: CONSERVED_SITE
name: Ribosomal_uS7_CS
description: Small ribosomal subunit protein uS7, conserved site

phrase: SRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQILYRAMKKIQQKTETNPLSVLHQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMVFKLSSELVDAAKGSGDAIRKKEETHRMAEAN
type: DOMAIN
name: Ribosomal_uS7_dom
description: Small ribosomal subunit protein uS7 domain
Protein sequence:
MDVPAFRERLLRLAPKDPLVLAVSGGGDSVALALLVKEAGRQAVVAHLDHGLRPESPLDQAFVRALAERLGFPFFTERVEVARIAQARGENLEAVAREVRYAFLHRVAREVGARAILTAHTLDDQAETVLLQLLQGTARATGIREREGIVVRPLLAHTREELRAYLRARGEAWREDPTNQDPALDRNFLRLFVFPLLEERFPAAKRALARFAEARAEEEGVLERQAEARLLPDPRFFVPAFRAAPLLEAPLAVRRRALRRLLEKLGLRPEARLVLLLEEALRGRPQTLPGGVLARRKGGTLFLLPPRPRLPLPPGFRRPAPGDYLERPSGRKRLVDFLAEKGVPRELKPLWPVRAEGNRVVEVLGLYPPPPEEAHMAEALAEAASAFREGEVPVGAVLVLPGRVLRAHNRVEGLRDPTAHAEMLLLREAGPEARGGRLYVTLEPCLMCHHALAQAGVEVVYGAENLKEGALTRFGLPTRARGGVRERECAKLLRDFFARLREGCRSG

Annotated regions:
phrase: PLVLAVSGGGDSVALALLVKEAGRQAVVAHLDHGLRPESPLDQAFVRALAERLGFPFFTERVEVARIAQARGENLEAVAREVRYAFLHRVAREVGARAILTAHTLDDQAETVLLQLLQGTARATGIREREGIVVRPLLAHTREELRAYLRARGEAWREDPTNQDPALDRNFLRLFVF
type: DOMAIN
name: tRNA_Ile_lys_synt_N
description: tRNA(Ile)-lysidine synthase, N-terminal

phrase: LVLAVSGGGDSVALALLVKEAGRQAVVAHLDHGLRPESPLDQAFVRALAERLGFPFFTERVEVARIAQARGENLEAVAREVRYAFLHRVAREVGARAILTAHTLDDQAETVLLQLLQGTARATGIREREGIVVRPLLAHTREELRAYLRARGEAWREDPTNQDPALDRNFLRLFVF
type: DOMAIN
name: tRNA_Ile_lys_synt_N
description: tRNA(Ile)-lysidine synthase, N-terminal

phrase: LVLAVSGGGDSVALALLVKEAGRQAVVAHLDHGLRPESPLDQAFVRALAERLGFPFFTERVEVARIAQARGENLEAVAREVRYAFLHRVAREVGARAILTAHTLDDQAETVLLQLLQGTARATGIREREGIVVRPLLAHTREELRAYLRARGEAWREDPTNQDPALDRNFL
type: DOMAIN
name: TilS/TtcA_N
description: tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal

phrase: HAEMLLLREAGPEARGGRLYVTLEPCLMCHHA
type: BINDING_SITE
name: APOBEC/CMP_deaminase_Zn-bd
description: APOBEC/CMP deaminase, zinc-binding

phrase: PPEEAHMAEALAEAASAFREGEVPVGAVLVLPGRVLRAHNRVEGLRDPTAHAEMLLLREAGPEARGGRLYVTLEPCLMCHHALAQAGVEVVYGAENLKEGALTRFGLPTRARGGVRERECAKLLRDFFAR
type: DOMAIN
name: CMP_dCMP_dom
description: Cytidine and deoxycytidylate deaminase domain

phrase: EEAHMAEALAEAASAFREGEVPVGAVLVLPGRVLRAHNRVEGLRDPTAHAEMLLLREAGPEARGGRLYVTLEPCLMCHHALAQAGVEVV
type: DOMAIN
name: CMP_dCMP_dom
description: Cytidine and deoxycytidylate deaminase domain
Protein sequence:
MAEGVFSGAIGIDLGTTYSCVATYESSVEIIANEQGNRVTPSFVAFTPEERLIGDAAKNQAALNPRNTVFDAKRLIGRRFDDESVQSDMKTWPFKVIDANGSPMIEVEYLGETKSFSPQEISAMVLTKMKEIAEAKIGKKVEKAVITVPAYFNDAQRQATKDAGAIAGLNVLRIINEPTAAAIAYGLGAGKSEKERHVLIFDLGGGTFDVSLLNIAGGVYTVKSTSGNTHLGGQDFDTNLLEHFKAEFKKKTGLDISGDARALRRLRTAAERAKRTLSSVTQTTVEVDSLFEGEDFETSITRARFEDINAALFKSTLEPVEQVLKDAQISKSQIDEVVLVGGSTRIPKVQKLLSDFFEGKQLEKSINPDEAVAYGAAVQAAILTGSNLSDDTKDLLLLDVAPLSLGVAMQGDVFACVIPRNTTVPTIKRRTFTTVHDGQTTVTFPVYQGERVNCKDNTLLGEFDLKGIPPLPAGEPVLEAIFEVDANGILKVTAVEKSTGKTANITISNAIGRLSSEDIEKMVSQAEEFKAADEAFAKRHEARQRLESYVSSIEQTVSDPVLSAKMKKGAKSKVEAALADAFSALQIEESSAEDYRKAEIGLKRVVTKAMATR

Annotated regions:
phrase: VVLVGGSTRIPKVQ
type: CONSERVED_SITE
name: Heat_shock_70_CS
description: Heat shock protein 70, conserved site

phrase: IFDLGGGTFDVSL
type: CONSERVED_SITE
name: Heat_shock_70_CS
description: Heat shock protein 70, conserved site

phrase: IDLGTTY
type: CONSERVED_SITE
name: Heat_shock_70_CS
description: Heat shock protein 70, conserved site