nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MPVNLLDFDAAGLTAFFAERGEKPFRARQVLRWLHRSGVGDFDAMTDIAKSLRETLKASATVTPPAIVADRLSEDGSRKFLFDVGAGNAVESVFIPEDDRGTLCISTQAGCALDCAFCSTGKQGFNRNLTTAEIIGQLWQVNRTLGADPKGDRIISNVVLMGMGEPLANLDNSLAALRLMLDDNAYGLSRRRVTVSTSGIVPAMDRLRDECPVALAVSLHAPDDALRDQLVPINQKYPLRELLAACRRYIERAPRDFITFEYVMLDGVNDSDAHARALLAIARQVPCKYNLIPFNPFPGSPFRRSPTPRIRRFVEILLEGGIVATTRKTRGDDIAAACGQLAGQVEDRTRRTGRRVIDIREAD

Annotated regions:
phrase: PVNLLDFDAAGLTAFFAERGEKPFRARQVLRWLHRSGVGDFDAMTDIAKSLRETLKASATVTPPAIVADRLSEDGSRKFLFDVGAGNAVESVFIPEDDRGTLCISTQAGCALDCAFCSTGKQGFNRNLTTAEIIGQLWQVNRTLGADPKGDRIISNVVLMGMGEPLANLDNSLAALRLMLDDNAYGLSRRRVTVSTSGIVPAMDRLRDECPVALAVSLHAPDDALRDQLVPINQKYPLRELLAACRRYIERAPRDFITFEYVMLDGVNDSDAHARALLAIARQVPCKYNLIPFNPFPGSPFRRSPTPRIRRFVEILLEGGIVATTRKTRGDDIAAACGQLAGQVEDRTRR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: EDDRGTLCISTQAGCALDCAFCSTGKQGFNRNLTTAEIIGQLWQVNRTLGADPKGDRIISNVVLMGMGEPLANLDNSLAALRLMLDDNAYGLSRRRVTVSTSGIVPAMDRLRDECPVALAVSLHAPDDALRDQLVPINQKYPLRELLAACRRYIERAPRDFITFEYVMLDGVNDSDAHARALLAIARQVPCKYNLIPFNPFPGSPFRRSPTPRIRRFVEILLEGGIVATTRKTRGD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: ISTQAGCALDCAFCSTGKQGFNRNLTTAEIIGQLWQVNRTLGADPKGDRIISNVVLMGMGEPLANLDNSLAALRLMLDDNAYGLSRRRVTVSTSGIVPAMDRLRDECPVALAVSLHAPDDALRDQLVPINQKYPLRELLAACRRYIERAPRDFITFEYVMLDGVNDSD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VNLLDFDAAGLTAFFAERGEKPFRARQVLRWLHRSGVGDFDAMTDIAKSLRETLKASAT
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MRVRGIQRNWPQWWIWGILGFWMIMACRVMGNLWVTIYYGVPVWREAKTTLFCASEAKAYEREMHNVWATHACVPTDPNPQELVLENVTENFNMWKNDMVDQMHEDIINLWDQSLKPCVKLTPLCVTLNCSDATVNYNNNMSGEIKNCSFNITTEVRDKRRKENALFYRLDIVQLNEGSTNSSNNSMYRLINCNTSVVTQACPKVSFDPIPIHYCAPAGYAILKCNNKTFSGTGPCNNVSTVQCTHGIKPVVSTQLLLNGGLAEEGIIIRSENLTDNVKTIIVHLNESVKIVCMRPNNNTRKSMRIGPGQTFYATGEIIGDIRQAHCNISKDKWDKTIQNVGKKLREHFPNKTIIFKASSGGDLEITTHSFNCGGEFFYCNTSNLFNSTYNGTDMANGTGNTSAYITLQCRIKQIINMWQEVGRAMYAPPIAGNITCESNITGLLLTRDGGTENGTETFRPGGGDMKNNWRSELYKYKVVEIQPLGIAPTKARRRVVQKEKRAVGMGALFLGFLGAAGSTMGAASITLTVQAKQLLSGIVQQQGNLLRAIEAQQHMLQLTVWGIKQLQARVLAIERYLQDQQLLGMWGCSGKLICTTNVPWNSSWSNKSYTDIWDNMTWMQWDREINNYTNTIYMLLEESQSQQEKNEKDLLALDSWNNLWNWFSITKWLWYIKIFIMIVGGLIGLRIIFAVLSVVNRVRQGYSPLSFQTLIPNPRGPDRPGGTEEEGGEQDRDRSVRLVNGFLALAWDDLRSLCLFSCHLLRDFILI

Annotated regions:
phrase: MGAASITLTVQAKQLLSGIVQQQGNLLRAIEAQQHMLQLTVWGIKQLQARVLAIERYLQDQQLLGMWGCSGKLICTTNVPWNSSWSNKSYTDIWDNMTWMQWDREINNYTNTIYMLLEESQSQQEKNEKDLLALDSWNNLWNWFSITKWLWYIKIFIMIVGGLIGLRIIFAVLSVVNRVRQGYSPLSFQT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: VQAKQLLSGIVQQQGNLLRAIEAQQHMLQLTVWGIKQLQARVLAIERYLQDQQLLGMWGCSGKLICTTNVPWNSSWSNKSYTDIWDNMTWMQWDREINNYTNTIYMLLEESQSQQEKNEKDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTIYYGVPVWREAKTTLFCASEAKAYEREMHNVWATHACVPTDPNPQELVLENVTENFNMWKNDMVDQMHEDIINLWDQSLKPCVKLTPLCVTLNCSDATVNY
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: GEIKNCSFNITTEVRDKRRKENALFYRLDIVQLNEGSTNSSNNSMYRLINCNTSVVTQACPKVSFDPIPIHYCAPAGYAILKCNNKTFSGTGPCNNVSTVQCTHGIKPVVSTQLLLNGGLAEEGIIIRSENLTDNVKTIIVHLNESVKIVCMRPNNNTRKSMRIGPGQTFYATGEIIGDIRQAHCNISKDKWDKTIQNVGKKLREHFPNKTIIFKASSGGDLEITTHSFNCGGEFFYCNTSNLFNSTYNGTDMANGTGNTSAYITLQCRIKQIINMWQEVGRAMYAPPIAGNITCESNITGLLLTRDGGTENGTETFRPGGGDMKNNWRSELYKYKVVEIQPLGIAPTKARRRVVQKEK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MPDLSLERACGGRVAGVDEVGRGPLAGPVVAAAVVIDAGRADPALLARLDDSKKLSAALRQRLATALLADPGVEVGLGEASVAEIDRINILQATFLAMGRALAKLAPPVDLALVDGNRLPPLPCPGQAVVRGDGLSLSIAAASIVAKVHRDAAMATLAQALPGYGWERNAGYGTAEHLAALDRLGATPHHRASFAPVREALARSALPGHKCVTALTFS

Annotated regions:
phrase: AGVDEVGRGPLAGPVVAAAVVIDAGRADPALLARLDDSKKLSAALRQRLATALLADPGVEVGLGEASVAEIDRINILQATFLAMGRALAKLAPPVDLALVDGNRLPPLPCPGQAVVRGDGLSLSIAAASIVAKVHRDAAMATLAQALPGYGWERNAGYGTAEHLAALDRLGATPHHRASFA
type: DOMAIN
name: RNase_HII/HIII_dom
description: Ribonuclease HII/HIII domain

phrase: GRVAGVDEVGRGPLAGPVVAAAVVIDAGRADPALLARLDDSKKLSAALRQRLATALLADPGVEVGLGEASVAEIDRINILQATFLAMGRALAKLAPPVDLALVDGNRLPPLPCPGQAVVRGDGLSLSIAAASIVAKVHRDAAMATLAQALPGYGWERNAGYGTAEHLAALDRLGATPHHRASFAPVREALARSA
type: DOMAIN
name: RNase_HII/HIII_dom
description: Ribonuclease HII/HIII domain
Protein sequence:
MEGPEAVQRATELIEQRLAQEEETEKLRRSAPGKLSMDMLVLEEEKRLGVQSPALQKVKGQERVRKTSLDLRREIIDVGGIQNLIELRKKRKQKKRDALAAAQEPPPEPEEITGPVNEETFLKAAVEGKMKVIDKYLADGGSADTCDEFRRTALHRASLEGHMEILEKLLENGATVDFQDRLDCTAMHWACRGGHLEVVRLLQSRGADTNVRDKLLSTPLHVAVRTGHVEIVEHFLSLGLDINAKDREGDSALHDAVRLNRYKIIKLLLLHGADMMAKNLAGKTPTDLVQLWQADTRHALEHPEPESEQNGLERPGSGRETPQPIPAQ

Annotated regions:
phrase: AAVEGKMKVIDKYLADGGSADTCDEFRRTALHRASLEGHMEILEKLLENGATVDFQDRLDCTAMHWACRGGHLEVVRLLQSRGADTNVR
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: LDCTAMHWACRGGHLEVVRLLQSRGADTN
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: FRRTALHRASLEGHMEILEKLLENGATVD
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: LLSTPLHVAVRTGHVEIVEHFLSLGLDIN
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: EGDSALHDAVRLNRYKIIKLLLLHGADMM
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: EGDSALHDAVRLNRYKIIKLLLLHGADMMAKN
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: FRRTALHRASLEGHMEILEKLLENGATVDFQD
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: LDCTAMHWACRGGHLEVVRLLQSRGADTNVRD
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: LHVAVRTGHVEIVEHFLSLGLDINAKDREGDSALHDAVRLNRYKIIKLL
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: LSTPLHVAVRTGHVE
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: IIKLLLLHGADMMA
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: LLSTPLHVAVRTGHVEIVEHFLSLGLDINAKD
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat
Protein sequence:
MGSKCSKSRKDDWPAVRERIRQAPAAAEGAGAAADGVGAVSQDLARHGAITSSNQNNPACTWLEAQQEDSEVGFPVRPQVPLRPMTYKAAFDLGFFLKEKGGLDGLIYSKQRQDILDLWVYNTQGYFPDWQNYTPGPGIRYPLCFGWCFKLVPVDPTEIEEANRGENNSLLHPICQHGMEDEDGEVLQWRFDSSLARRHIARELHPEYYKDC

Annotated regions:
Protein sequence:
MKTNPATNLLGLDAQGMEKLFARLGEKPFRARQVLKWIHRRGAADFSAMSDIAKELRAKLTAVAVIEPPVVVGDGTAADGTRKWLLKVDGANAVEAVFIPEDGRGTLCVSSQAGCTLDCAFCSTGKQGFNRNLSAAEIIGQLWLANRALGIHAGGARAISNVVFMGMGEPMLNLDAVIPAARLMIDDNGYGLSRRRVTVSTSGVVPGMDRLAGECPVALAVSLHAADDALRDRLVPINRKYPIRQLLAACIRYLERAPRDFITFEYVMLDGVNDSDAQAKALLGIASQVRCKFNLIPFNPFPDSGFKRSSPERIRRFAEVLQRAGLTVTTRKTRGEGIDAACGQLAGEVTDRTRRSRTVAITELRA

Annotated regions:
phrase: TNLLGLDAQGMEKLFARLGEKPFRARQVLKWIHRRGAADFSAMSDIAKELRAKLTAVAV
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: SSQAGCTLDCAFCSTGKQGFNRNLSAAEIIGQLWLANRALGIHAGGARAISNVVFMGMGEPMLNLDAVIPAARLMIDDNGYGLSRRRVTVSTSGVVPGMDRLAGECPVALAVSLHAADDALRDRLVPINRKYPIRQLLAACIRYLERAPRDFITFEYVMLDGVNDSD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: EDGRGTLCVSSQAGCTLDCAFCSTGKQGFNRNLSAAEIIGQLWLANRALGIHAGGARAISNVVFMGMGEPMLNLDAVIPAARLMIDDNGYGLSRRRVTVSTSGVVPGMDRLAGECPVALAVSLHAADDALRDRLVPINRKYPIRQLLAACIRYLERAPRDFITFEYVMLDGVNDSDAQAKALLGIASQVRCKFNLIPFNPFPDSGFKRSSPERIRRFAEVLQRAGLTVTTRKTRGEGI
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MNIHMKRKTIKNLSALENRMLMLDGMPAVRVKTELVESEQGSPNVHNYPDMEAVPLLLNNVKGEPPEDSLPVDHFQTQTEPVDLSINKARTSPTAASSSPVSMTASASSPSSTSTSSSSSSRPASSPTVITSVSSASSSSTVLSPGPLVASASGVGGQQFLHIIHPVPPSSPMNLQSNKLSHVHRIPVVVQSVPVVYTAVRSPGNVNNTIVVPLLEDGRSHGKAQMEPRGLSPRQSKSDSDDDDLPNVTLDSVNETGSTALSIARAVQEVHPSPVSRVRGNRMNNQKFACSISPFSIESTRRQRRSESPDSRKRRIHRCDFEGCNKVYTKSSHLKAHRRTHTGEKPYKCTWEGCTWKFARSDELTRHYRKHTGVKPFKCADCDRSFSRSDHLALHRRRHMLV

Annotated regions:
phrase: CADCDRSFSRSDHLALHRRR
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: YKCTWEGCTWKFARSDELTRHYRKHTGVK
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: FKCADCDRSFSRSDHLALHRRR
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: HRCDFEGCNKVYTKSSHLKAHRRTHTGEK
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: CTWEGCTWKFARSDELTRHYRK
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: FKCADCDRSFSRSDHLALHRRR
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: HRCDFEGCNKVYTKSSHLKAHRRT
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: YKCTWEGCTWKFARSDELTRHYRK
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: CDFEGCNKVYTKSSHLKAHRRT
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: FKCADCDRSFSRSDHLALHRRR
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: HRCDFEGCNKVYTKSSHLKAHRRT
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: YKCTWEGCTWKFARSDELTRHYRK
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type
Protein sequence:
MAKSNGTTTTPTSSPGAPDVDGTALRDDAASIKQAIRAEAHTLGFEACRFTAPTLPPQMGEGLTAMVEAGYHGEMDWLADRQEQRSAPRRLWPEVRSVIVLGVNYGPSDDPLARLDQRSLGNISVYAQNDDYHDLIKKRLKRLGRWIGQTYDTDLKVFVDTAPVAEKPLAAQAGLGWQGKHTNLVSRSYGSWLFLGVIYLAIELPPDSAETDHCGQCRQCLDICPTDAFPAPYQLDARRCISYLTIEHKGTIPMPLRSAMGNRIYGCDDCLAVCPWNKFAKATEEPAFLPRAALRAPQLADLSALDDAGFRALFRKSPVKRIGRDRFVRNVMIAIGNSGNAALRSALRPRLADPSPPVRAMAVWAWRQLDGDDTVLRTAMAHEQDPEVLAEIDSTTV

Annotated regions:
phrase: RSAPRRLWPEVRSVIVLGVNYGPSDDPLARLDQRSLGNISVYAQNDDYHDLIKKRLKRLGRWIGQTYDTDLKVFVD
type: DOMAIN
name: QueG_DUF1730
description: Epoxyqueuosine reductase QueG, DUF1730

phrase: CGQCRQCLDIC
type: CONSERVED_SITE
name: 4Fe4S_Fe_S_CS
description: 4Fe-4S ferredoxin, iron-sulphur binding, conserved site

phrase: PPDSAETDHCGQCRQCLDICPTDAFPAPY
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain
Protein sequence:
MIYQMQMPAKIELDESSHSDSFGKFIAQPLERGYGVTLGNLMRRVLLASLPGTAITGIKIENVYHEFSTIQGVREDVPEIVLNLKKVRFRSQCKRSCKTTVTLVGPMEFTAGVIQPQEGEFEVLNKDLHIATINAGTTVTLDIFIGRGRGYVPAEENRAEGMPLGFIPIDSIFTPIRNVKFTVENTRVGQRTDYEKMILEVETDGSITPDDSISLAGRVISDHVLLFADFSPAEEEYTEEEFKQQDDEFETMRRLLATKIEDLDLSVRSHNCLRLAEIDTLGELVSHKEDELLNYKNFGKKSLTELKEQLDKFDLKFGMDITRYQMK

Annotated regions:
phrase: FGKFIAQPLERGYGVTLGNLMRRVLLASLPGTAITGIKIENVYHEFSTIQGVREDVPEIVLNLKKVRFRSQCKRSCKTTVTLVGPMEFTAGVIQPQEGEFEVLNKDLHIATINAGTTVTLDIFIGRGRGYVPAEENRAEGMPLGFIPIDSIFTPIRNVKFTVENTRVGQRTDYEKMILEVETDGSITPDDSISLAGRVISDHVLLFAD
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: QPLERGYGVTLGNLMRRVLLASLPGTAITGIKIENVYHEFSTIQGVREDVPEIVLNLKKVRFRSQCKRSCKTTVTLVGPMEFTAGVIQPQEGEFEVLNKDLHIATINAGTTVTLDIFIGRGRGYVPAEENRAEGMPLGFIPIDSIFTPIRNVKFTVENTRVGQRTDYEKMILEVETDGSITPDDSISLAGRVISD
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: IKIENVYHEFSTIQGVREDVPEIVLNLKKVRFRSQCKRSCKTTVTLVGPMEFTAGVIQPQEGEFEVLNKDLHIATINAGTTVTLDIFIGRGRGYVPAEENRAEGMPLGFIPIDSIF
type: DOMAIN
name: DNA-dir_RNA_pol_insert
description: DNA-directed RNA polymerase, insert domain

phrase: EFETMRRLLATKIEDLDLSVRSHNCLRLAEIDTLGELVSHKEDELLNYKNFGKKSLTELKEQL
type: DOMAIN
name: RNAP_asu_C
description: RNA polymerase, alpha subunit, C-terminal
Protein sequence:
MKDLFRRAPKRFTAARIENQAIPDNMWVKCPSCGDLIYTRQFSDNLKVCKCGYHMRLTAREWLGLLDDGSFVEFDAALASVDALGFVSPRHVYEQKLIESRQQTGLNDALITSSGAINGMLLCLAVTEFEFIGGSMGSAYGERLARVIERAADARLPLLTINASGGARQEEGTLALLQMAKVNMALTRLAAAGQPHIALLVDPCYGGVLASYTSVADVIIAEPGARVGFAGRRVIEQTIRQKLPVHFQTAEFLLDHGMIDMVTPRSELRGVLSTLLRLYRDAFAHTSAAQHVPALTHVQG

Annotated regions:
phrase: WVKCPSCGDLIYTRQFSDNLKVC
type: DOMAIN
name: Znf-ACC
description: Acetyl-coA carboxylase zinc finger domain

phrase: MWVKCPSCGDLIYTRQFSDNLKVCKCGYHMRLTAREWLGLLDDGSFVEFDAALASVDALGFVSPRHVYEQKLIESRQQTGLNDALITSSGAINGMLLCLAVTEFEFIGGSMGSAYGERLARVIERAADARLPLLTINASGGARQEEGTLALLQMAKVNMALTRLAAAGQPHIALLVDPCYGGVLASYTSVADVIIAEPGARVGFAGRRVIEQTIRQKLPVHFQTAEFLLDHGMIDMVTPRSELRGVLSTLLRLYRDAFAHTSAAQHVP
type: DOMAIN
name: COA_CT_N
description: Acetyl-coenzyme A carboxyltransferase, N-terminal

phrase: SVDALGFVSPRHVYEQKLIESRQQTGLNDALITSSGAINGMLLCLAVTEFEFIGGSMGSAYGERLARVIERAADARLPLLTINASGGARQEEGTLALLQMAKVNMALTRLAAAGQPHIALLVDPCYGGVLASYTSVADVIIAEPGARVGFAGRRVIEQT
type: DOMAIN
name: AcCoA_carboxyl_beta
description: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta
Protein sequence:
MTALENWDDAEDAETADAIALDPVERAVADIAAGRPVVVVDDENRENEGDLVIAAEKATPEAVAFMMSECRGLICAPMEGPELDRLELPQMVEHNTESMRTAFTVSVDAAAAHGVSTGISAADRATTLRLLASGTAAAGDLVRPGHVFPLRAKPGGVLVRNGHTEAGVDLARLAGLRPAAAIVEIAGEDGAMLRLPELVLFARKHGLSIISIEDLIAYRRGPEPAVRREARTRLPTAHGEYTAYGYRSTADGVEHIALVAGELGDGEDVLVRIHSECLTGDVFHSLRCDCGPQLDASLRRIAEAGRGVVIYLRGHEGRGIGLMSKLRAYELQERGRDTLDANLELGLPADSRDYAAGAQMLQDLGVRSLRLMTNNPDKTAALIRHGLTVTGREPMPVQAGEHNLRYLRTKRDRMGHDLPWLDPGTTATCQNQ

Annotated regions:
phrase: REARTRLPTAHGEYTAYGYRSTADGVEHIALVAGELGDGEDVLVRIHSECLTGDVFHSLRCDCGPQLDASLRRIAEAGRGVVIYLRGHEGRGIGLMSKLRAYELQERGRDTLDANLELGLPADSRDYAAGAQMLQDLGVRSLRLMTNNPDKTAALIRHGLTVTGR
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MDFTNYKAHELKNLISKKEASVEEVTKAHLENVKNIDEKVNAFLYIAEEEALNDAKALDEKLSKGEDIGLLGGAPLGIKDNISVKNMQNTCASKILEGYISPYDATVSESVKSQGGVILGKLNMDEFAMGSSTENSAYKITRNPWDLDRVPGGSSGGSAAAVASKEVPLALGTDTGGSVRQPASFCGIVGLKPTYGRVSRSGVVAYGSTLDQVGTLGRDVKDCALLTQVISGVDHRDFTTANINVPNYENSLSENIKGKKIALPKEFFKDGLDPKVQKAIYDALEVFKANGAEITEVSLPLADYAISAYYLLACAEASSNLARFDGVRYGHRSESVEDAVDVYFKSRSEAFGKEVKKRIMLGTYALSAGYYDAYYKKALKVRNLIKGEFENIFKDFDAIISPTAPTPAYKIGEKTENALEMYLGDIYTVPVNIAGIPAISLPCGVADGLPVGLQIMGNYFKEDTLFNLAYSYEQSTKWHEMHPNL

Annotated regions:
phrase: GGSSGGSAAAVASKEVPLALGTDTGGSVRQP
type: CONSERVED_SITE
name: Amidase_CS
description: Amidase, conserved site

phrase: EVTKAHLENVKNIDEKVNAFLYIAEEEALNDAKALDEKLSKGEDIGLLGGAPLGIKDNISVKNMQNTCASKILEGYISPYDATVSESVKSQGGVILGKLNMDEFAMGSSTENSAYKITRNPWDLDRVPGGSSGGSAAAVASKEVPLALGTDTGGSVRQPASFCGIVGLKPTYGRVSRSGVVAYGSTLDQVGTLGRDVKDCALLTQVISGVDHRDFTTANINVPNYENSLSENIKGKKIALPKEFFKDGLDPKVQKAIYDALEVFKANGAEITEVSLPLADYAISAYYLLACAEASSNLARFDGVRYGHRSESVEDAVDVYFKSRSEAFGKEVKKRIMLGTYALSAGYYDAYYKKALKVRNLIKGEFENIFKDFDAIISPTAPTPAYKIGEKTENALEMYLGDIYTVPVNIAGIPAISLPCGVADGLPVGLQIMGNYFKEDT
type: DOMAIN
name: Amidase_dom
description: Amidase signature domain
Protein sequence:
MSEQQTASLGEFTFECGESIPDLELAYETYGEFTGDNAVLVCHALTGSAHVAGGRRRSDTSGQAHAWWDDIVGPGKAVDTTDYYVICANIPGSCYGSSGPPSTNPETGEPWGTTFPAVTVGDWTRAQRRLLDHLGVPHLHAVVGGSVGGMNVLDWAKRHPDHVNRVAVVAAAARLDPQCLALDAIARRAITTDPNWNGGDYYGEDPPVEGLALARQIGHVMYLSKSSMQDKFGRRSSGIDAGRDSFEMDPAAGFFPYREVESYLDYQGEKFARRFDANSYLYLTRAMDNYDLASGYESDRDALAAFDGEALLISFTGDWHFTVEQSEAVADAFRESGTDTAHHVVDSDHGHDAFLVEPDRVGPPLDDFLVDGVAGKAVSDTTPDDDDGDEFAPVHTSLFSD

Annotated regions:
phrase: NAVLVCHALTGSAHVAGGRRRSDTSGQAHAWWDDIVGPGKAVDTTDYYVICANIPGSCYGSSGPPSTNPETGEPWGTTFPAVTVGDWTRAQRRLLDHLGVPHLHAVVGGSVGGMNVLDWAKRHPDHVNRVAVVAAAARLDPQCLALDAIARRAITTDPNWNGGDYYGEDPPVEGLALARQIGHVMYLSKSSMQDKFGRRSSGIDAGRDSFEMDPAAGFFPYREVESYLDYQGEKFARRFDANSYLYLTRAMDNYDLASGYESDRDALAAFDGEALLISFTGDWHFTVEQSEAVADAFRESGTDTAHHVVDSDHGHDAFLVE
type: DOMAIN
name: AB_hydrolase_1
description: Alpha/beta hydrolase fold-1
Protein sequence:
MAKLNAYFGEYGGQYVPQILVPALDQLEQAFIDAQEDPDFRAEFMSLLQEYAGRPTALTLTRNLTKGTKTKLYLKREDLLHGGAHKTNEVLGQGLVGKRMGKSAIIAETGAGQHGVGSALASALVGLKCRIIMGAKNLERQSPNVFRMKLMAESIPSSVTLKVAVNEALRDWSATETTHYYLGTAAGPHPYPTIVREFQRIIGEETKLQILAREGRLPDAVLACIGGGSNAIGMFADFIDEANVRLIGIEPAGKGIDTHQHGAPLKHGKTGIFFGMKAPLMQDSYGQVEESYSVSAGLDFPSVGPQHAHLNAIGRANYESITDDEALEAFQSIARNEGIIAALESSHALAYAIKMARIDPDKEQLLVVNLSGRGDKDIFTVHQLLEERGAL

Annotated regions:
phrase: AGRPTALTLTRNLTKGTKTKLYLKREDLLHGGAHKTNEVLGQGLVGKRMGKSAIIAETGAGQHGVGSALASALVGLKCRIIMGAKNLERQSPNVFRMKLMAESIPSSVTLKVAVNEALRDWSATETTHYYLGTAAGPHPYPTIVREFQRIIGEETKLQILAREGRLPDAVLACIGGGSNAIGMFADFIDEANVRLIGIEPAGKGIDTHQHGAPLKHGKTGIFFGMKAPLMQDSYGQVEESYSVSAGLDFPSVGPQHAHLNAIGRANYESITDDEALEAFQSIARNEGIIAALESSHALAYAIKMARIDPDKEQLL
type: DOMAIN
name: TrpB-like_PALP
description: Tryptophan synthase beta chain-like, PALP domain

phrase: LLHGGAHKTNEVLG
type: CONSERVED_SITE
name: Trp_synth_b_CS
description: Tryptophan synthase, beta chain, conserved site
Protein sequence:
MPTEQMPIFALATGAGRAAIAVMRLTGAGCGDMLQRLCGPLPPPRQASLRGLWRRDAAAAPVLLDRALVLWFPGPRSYTGEDSAELHLHAGPAVIAGVADALVALGARPAEPGEFTRRAFAHGRLDLIEAEGIADLIDAETEAQRRQALDQADGTLSRIYDGWAARLRTLLAHQEALIDFPDEDLPPGVEQALLDDLTALRSEMQAHLDDGGRGEKLRRGLVFTIVGAPNVGKSSLLNALAGRDAAIVSAIAGTTRDAIEIRVVLGDVPVTLIDTAGLRETQDEIEAEGVRRALFHVKHADCVIAMFDGETVPDDIPADAIRVRNKVDLAPVPAGADAIGISVRQGTGMDALRTALAERARALTASAAGPPLTRARHRAAIEETAGHLAAALDMHWPEMRGEEMRLAMRALGRLTGAVGVEDLLDTVFGQFCIGK

Annotated regions:
phrase: IFALATGAGRAAIAVMRLTGAGCGDMLQRLCGPLPPPRQASLRGLWRRDAAAAPVLLDRALVLWFPGPRSYTGEDSAELHLHAGPAVIAGVADALVALGARPAEPGEFTRRAFAHG
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal

phrase: LIEAEGIADLIDAETEAQRRQALDQADGTLSRIYDGWAARLRTLLAHQEALIDFPDEDLPPGVEQALLDDLTALRSEMQAHLDDGGRGEKLRRGLVFTIVGAPNVGKSSLLNALAGRDAAIVSAIAGTTRDAIEIRVVLGDVPVTLIDTAGLRETQDEIEAEGVRRALFHVKHADCVIAMFDGETVPDDIPADAIRVRNKVDLAPVPAGADAIGISVRQGTGMDALRTALAERARALTASAAGPPLTRARHRAAIEETAGHLAAALDMHWPEMRGEEMRLAMRALGRLTGAVGVEDLLDTVFGQF
type: DOMAIN
name: MnmE_helical
description: MnmE, helical domain

phrase: GLVFTIVGAPNVGKSSLLNALAGRDAAIVSAIAGTTRDAIEIRVVLGDVPVTLIDTAGLRETQDEIEAEGVRRALFHVKHADCVIAMFDGETVPDDIPADAIRVRNKVDLAPVPAGADAIGISVRQGTGMDALRTALAERA
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain

phrase: FTIVGAPNVGKSSLLNALAG
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: VRRALFHVKHADCVIAMF
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: PIFALATGAGRAAIAVMRLTGAGCGDMLQRLCGPLPPPRQASLRGLWRRDAAAAPVLLDRALVLWFPGPRSYTGEDSAELHLHAGPAVIAGVADALVALGARPAEPGEFTRRAFAH
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal

phrase: TIVGAPNVGKSSLLNALAGRDAAIVSAIAGTTRDAIEIRVVLGDVPVTLIDTAGLRETQDEIEAEGVRRALFHVKHADCVIAMFDGE
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: RRGLVFTIVGAPNVGKSSLLNALAGRDAAIVSAIAGTTRDAIEIRVVLGDVPVTLIDTAGLRETQDEIEAEGVRRALFHVKHADCVIAMFDGETVPDDIPADAIRVRNKVDLAPVPAGADAIGISVRQGTGMDALRTALAER
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain

phrase: TIVGAPNVGKSSLLNALAGRDAAIVSAIAGTTRDAIEIRVVLGDVPVTLIDTAGLRETQDEIEAEGVRRALFHVKHADCVIAMFDGE
type: DOMAIN
name: GTP-bd
description: GTP binding domain
Protein sequence:
MGNKWSKSWPRVRERMRRTEPTEPAAAGVGTASQDLDKYGALTSSNTPANNAACAWLQAQEEDEDVGFPVRPQVPLRPMTYKAAFDLSFFLEEKGGLDGLIYSKKRQEILDLWVYNTQGFFPDWQNYTPGPGVRYPLTFGWCYKLVPVNPEAVEEANKGENNCLLHPISQHGMDDEDREVLQWRFDSSLARRHLAREKHPEWYKDC

Annotated regions:
Protein sequence:
MELQLALDLVNIPEAIELVKEVEQYIDVVEIGTPVVINEGLRAVKEIKEAFPQLKVLADLKIMDAGGYEIMKASEAGADIITVLGATDDATIKGAVEEAKKQKKKILVDMINVKDIESRAKEIDALGVDYICVHTGYDLQAEGKNSFEELTTIKNTVKNAKTAIAGGIKLDTLPEVIQQKPDLVIVGGGITSAADKAETASKMKQLIVQG

Annotated regions:
phrase: LQLALDLVNIPEAIELVKEVEQYIDVVEIGTPVVINEGLRAVKEIKEAFPQLKVLADLKIMDAGGYEIMKASEAGADIITVLGATDDATIKGAVEEAKKQKKKILVDMINVKDIESRAKEIDALGVDYICVHTGYDLQAEGKNSFEELTTIKNTVKNAKTAIAGGIKLDTLPEVIQQKPDLVIVGGGITSAADKAETASKMKQL
type: DOMAIN
name: 3-hexulose-6-phosphate_synth
description: 3-hexulose-6-phosphate synthase

phrase: MELQLALDLVNIPEAIELVKEVEQYIDVVEIGTPVVINEGLRAVKEIKEAFPQLKVLADLKIMDAGGYEIMKASEAGADIITVLGATDDATIKGAVEEAKKQKKKILVDMINVKDIESRAKEIDALGVDYICVHTGYDLQAEGKNSFEELTTIKNTVKNAKTAIAGGIKLDTLPEVIQQKPDLVIVGGGITSAADKAETAS
type: DOMAIN
name: OMPdeCOase_dom
description: Orotidine 5'-phosphate decarboxylase domain

phrase: MELQLALDLVNIPEAIELVKEVEQYIDVVEIGTPVVINEGLRAVKEIKEAFPQLKVLADLKIMDAGGYEIMKASEAGADIITVLGATDDATIKGAVEEAKKQKKKILVDMINVKDIESRAKEIDALGVDYICVHTGYDLQAEGKNSFEELTTIKNTVKNAKTAIAGGIKLDTLPEVIQQKPDLVIVGGGITSAADKAETASK
type: DOMAIN
name: HPS/KGPDC
description: HPS/KGPDC domain

phrase: ELQLALDLVNIPEAIELVKEVEQYIDVVEIGTPVVINEGLRAVKEIKEAFPQLKVLADLKIMDAGGYEIMKASEAGADIITVLGATDDATIKGAVEEAKKQKKKILVDMINVKDIESRAKEIDALGVDYICVHTGYDLQAEGKNSFEELTTIKNTVKNAKTAIAGGIKLDTLPEVIQQKPDLVIVGGGITSAADKAETASK
type: DOMAIN
name: OMPdeCOase_dom
description: Orotidine 5'-phosphate decarboxylase domain
Protein sequence:
MTKFEKPGKEDFDYPDMAKIAGERALADAGVPYSAVEQACVGYVYGDSTCGQRAIYHGLGLSGIPIVNVNNNCSTGSTALFMARQLVQGGLADCVLALGFEKMERGSLSSKFIENYMDRTNPMDKHMEVMLNKYGMAAAPAAPQMFGNAGREHMEKFGTTPEHFAKIAWKNHKHSTNNPYSQFQDEYTLDQVKQSRKVFEFLTLLQCCPTSDGAGAAVLASEDFVRSRGLEGQAVEILAQEMVTDVASTFQDNSCIKMVGYDMTSLAAKRCFETSGLKPTDVDVIELHDCFSANELITYEALGLCPEGKAGELIDRGDNTYGGQWVVNPSGGLISKGHPLGATGLAQCAELCWQLRGQAERRQVPGAKVALQHNIGLGGAVVVALYRMGFPQASRPQIAAVPTSADNSLQGFKAYSVFQEIEKKLKEEGEGIVKTIGGVFAFKVKDGPEGKDAVWVVDVKNGRGSVNKKADCTIAIGDEDLLNLMTGRMNPQTAFFQGKLKITGNMGMAMKLQSLQLAPAKAKL

Annotated regions:
phrase: NPSGGLISKGHPLGAT
type: CONSERVED_SITE
name: Thiolase_CS
description: Thiolase, conserved site

phrase: YDMTSLAAKRCFETSGLKPTDVDVIELHDCFSANELITYEALGLCPEGKAGELIDRGDNTYGGQWVVNPSGGLISKGHPLGATGLAQCAELCWQLRGQAERRQVPGAKVALQHNIG
type: DOMAIN
name: Thiolase_C_2
description: Thiolase, C-terminal domain 2

phrase: TKFEKPGKEDFDYPDMAKIAGERALADAGVPYSAVEQACVGYVYGDSTCGQRAIYHGLGLSGIPIVNVNNNCSTGSTALFMARQLVQGGLADCVLALGFEKMERGSLSSKFIENYMDRTNPMDKHMEVMLNKYGMAAAPAAPQMFGNAGREHMEKFGTTPEHFAKIAWKNHKHSTNNPYSQFQDEYTLDQVKQSRKVFEFLTLLQCCPTSDGAGAAVLASE
type: DOMAIN
name: Thiolase_N
description: Thiolase, N-terminal

phrase: FQEIEKKLKEEGEGIVKTIGGVFAFKVKDGPEGKDAVWVVDVKNGRGSVNKKADCTIAIGDEDLLNLMTGRMNPQTAFFQGKLKITGNMGMAMKLQS
type: DOMAIN
name: SCP2_sterol-bd_dom
description: SCP2 sterol-binding domain

phrase: VNNNCSTGSTALFMARQL
type: ACTIVE_SITE
name: Thiolase_acyl_enz_int_AS
description: Thiolase, acyl-enzyme intermediate active site
Protein sequence:
MKSGKTNIRHLSLPELQEYFGSIEEKPFRAKQVYEWLWLKHANSFDAMTNISKDLRNKLEQHFTLPAIKVDTTQHSNDGTIKSRFRLHDGHLVEGVLIPTDTRQTACVSSQVGCSLSCKFCATGYMDRKRNLDYDEIYDEVALLNQQAMDAYGKKLSNIVYMGMGEPLLNYKNVLQSIERITSPDGLGMSPRRITVSTAGVAKMIRQLGDDKVKFNLALSLHAANDEKRSQIMPINDTNNLKVLIEALNYFYKATQNQISFEYILFKDFNDSFRDADELIRIYRQVPADLVNIIEYNPISNARFMKPDEDVAEAFMEYLTKHKVNARLRRSRGKDIDAACGQLANKG

Annotated regions:
phrase: SSQVGCSLSCKFCATGYMDRKRNLDYDEIYDEVALLNQQAMDAYGKKLSNIVYMGMGEPLLNYKNVLQSIERITSPDGLGMSPRRITVSTAGVAKMIRQLGDDKVKFNLALSLHAANDEKRSQIMPINDTNNLKVLIEALNYFYKATQNQISFEYILFKDFNDSFRDA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TNIRHLSLPELQEYFGSIEEKPFRAKQVYEWLWLKHANSFDAMTNISKDLRNKLEQH
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: TDTRQTACVSSQVGCSLSCKFCATGYMDRKRNLDYDEIYDEVALLNQQAMDAYGKKLSNIVYMGMGEPLLNYKNVLQSIERITSPDGLGMSPRRITVSTAGVAKMIRQLGDDKVKFNLALSLHAANDEKRSQIMPINDTNNLKVLIEALNYFYKATQNQISFEYILFKDFNDSFRDADELIRIYRQVPADLVNIIEYNPISNARFMKPDEDVAEAFMEYLTKHKVNARL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: QTACVSSQVGCSLSCKFCATGYMDRKRNLDYDEIYDEVALLNQQAMDAYGKKLSNIVYMGMGEPLLNYKNVLQSIERITSPDGLGMSPRRITVSTAGVAKMIRQLGDDKVKFNLALSLHAANDEKRSQIMPINDTNNLKVLIEALNYFYKATQNQISFEYILFKDFNDSFRDADELIRIYRQVPADLVNIIEYNPISNARFMKPDEDVAEAFMEYLT
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain
Protein sequence:
MEHFHQIQQTIQHYQQQLAAQQQQQVQQQQLQQHQVVVQQNQQQAHQNSSNTTAGVGTQQLFTYKMASSFPNPATTMAQVVATSNAAGTTGYDYRLNMAQAAAAAAVPGSQWWYSAANQGQVDANTAAQLQHQQQQQQQQQQQQQQQHQQQQQMQQQQQQQNVINSASPMSRVKADAKPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKDKQRYEAEMQNYVPPKGAVVGRGKKRKQIKDPNAPKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYKTSGKIAMSAPSMQASMQAQAQKAALLAAAAQQQHQQLEEQHDDDDGDGDDDENQ

Annotated regions:
phrase: PKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEY
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain

phrase: FSRKCAERWKT
type: CONSERVED_SITE
name: HMG_boxA_CS
description: HMG box A DNA-binding domain, conserved site

phrase: PKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEY
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain

phrase: KPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKDKQRYEAEMQNYV
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain

phrase: APKRSLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEYK
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain

phrase: KPRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKDKQRYEAEMQN
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain

phrase: PRGRMTAYAYFVQTCREEHKKKHPDETVIFAEFSRKCAERWKTMVDKEKKRFHEMAEKDKQRYEAEMQNY
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain