Protein sequence:
MGARNSVLRGKKADELEKIRLRPGGKKKYRLKHIVWAANELDRFGLAESLLESKEGCQKILTVLDPLVPTGSENLKSLFNTVCVIWCIHAEEKAKDTEEAKQKVQRHLVAETKTTEKMPSTSRPTAPPSGNGGNFPVQQVAGNYTHVPLSPRTLNAWVKLVEEKKFGAEVVPGFQALSEGCTPYDINQMLNCVGDHQAAMQIIREIINEEAADWDAQHPIPGPLPAGQLREPRGSDIAGTTSTVEEQIQWMFRPQNPVPVGSIYRRWIQIGLQKCVRMYNPTNILDIKQGPKEPFQSYVDRFYKSLRAEQTDPAVKNWMTQTLLVQNANPDCKLVLKGLGINPTLEEMLTACQGVGGPGQKARLMAEALKEAMAPAPIPFAAAQQRRTIKCWNCGKEGHSARQCRAPRRQGCWKCGKAGHIMAKCPERQAGFLRVGPMGKEAPQFPCGPNPAGADTNSTPDRPSRGPTREVHAAREKAERAEREAIQRSDRGLPAARETRDTMQRDDRGLAAPQFSLWKRPVVTAHVEGQPVEVLLDTGADDSIVAGVELGSNYSPKIVGGIGGFINTKEYKNVEIRVLNKRVRATIMTGDTPINIFGRNILTALGMSLNLPVAKIEPIKIMLKPGKDGPKLRQWPLTKEKIEALKEICEKMEREGQLEEAPPTNPYNTPTFAIKKKDKNKWRMLIDFRELNKVTQDFTEIQLGIPHPAGLAKKKRITVLDVGDAYFSIPLHEDFRQYTAFTLPSINNAEPGKRYIYKVSPQGWKGSPAIFQYTMRQVLEPFRKANPDIILIQYMDDILIASDRTDLEHDRVVLQLKELLNGLGFSTPDEKFQKDPPYQWMGYELWPTKWKLQRIQLPQKEVWTVNDIQKLVGVLNWAAQIYPGIKTRNLCRLIRGKMTLTEEVQWTELAEAELEENKIILSQEQEGCYYQEEKELEATVQKDQDNQWTYKIHQGGKILKVGKYAKVKNTHTNGVRLLAQVVQKIGKEALVIWGRIPKFHLPVERDTWEQWWDNYWQVTWIPDWDFISTPPLVRLVFNLVKDPILGAETFYTDGSCNKQSREGKAGYITDRGRDKVRLLEQTTNQQAELEAFAMAVTDSGPKANIIVDSQYVMGIVAGQPTESESKIVNQIIEEMIKKEAIYVAWVPAHKGIGGNQEVDHLVSQGIRQVLFLEKIEPAQEEHEKYHSNVKELSHKFGLPKLVARQIVNTCTQCQQKGEAIHGQVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTVETIVLMAVHCMNFKRRGGIGDMTPAERLINMVTAEQEIQFLQAKNSKLQNFRVYFREGRDQLWKGPGELLWKGDGAVIVKVGADIKIIPRRKAKIIKDYGGRQEMDSGSNLEGAREDGEVA

Annotated regions:
phrase: AQEEHEKYHSNVKELSHKFGLPKLVARQIVNTCTQCQ
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: GARNSVLRGKKADELEKIRLRPGGKKKYRLKHIVWAANELDRFGLAESLLESKEGCQKILTVLDPLVPTGSENLKSLFNTVCVIWCIHAEEKAKDTEEAKQKVQRHLVAETKTTEKMPSTSRPTAPPSGNGGNFPVQQVAGN
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: AELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYN
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: KCWNCGKEGHSARQCR
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: GCWKCGKAGHIMAKCP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: CWKCGKAGHIMAKCP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: VYFREGRDQLWKGPGELLWKGDGAVIVKVGADIKIIPRRKAKI
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: MYNPTNILDIKQGPKEPFQSYVDRFYKSLRAEQTDPAVKNWMTQTLLVQNANPDCKLVLKGLGINPTLEEMLT
type: DOMAIN
name: Gag_p24_C
description: Retroviral nucleocapsid Gag protein p24, C-terminal domain

phrase: VTAHVEGQPVEVLLDTGADDSIVAGVELGSNYSPKIVGGIGGFINTKEYKNVEIRVLNKRVRATIMTGDTPINIFGRNIL
type: DOMAIN
name: Retropepsin-like_cat_dom
description: Retropepsin-like catalytic domain

phrase: YYQEEKELEATVQKDQDNQWTYKIHQGGKILKVGKYAKVKNTHTNGVRLLAQVVQKIGKEALVIWGRIPKFHLPVERDTWEQWWDNYWQVTWIPDWDFIS
type: DOMAIN
name: RVT_connect
description: Reverse transcriptase connection

phrase: VEVLLDTGADDSIVAGVELGSNYSPKIVGGIGGFINTKEYKNVEIRVLNKRVRATIMTGDTPINIFGRN
type: DOMAIN
name: Peptidase_A2_cat
description: Peptidase A2A, retrovirus, catalytic

phrase: ILGAETFYTDGSCNKQSREGKAGYITDRGRDKVRLLEQTTNQQAELEAFAMAVTDSGPKANIIVDSQYVMGIVAGQPTESESKIVNQIIEEMIKKEAIYVAWVPAHKGIGGNQEVDHLVSQGI
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: VLLDTGADDSI
type: ACTIVE_SITE
name: Aspartic_peptidase_AS
description: Aspartic peptidase, active site

phrase: RNSVLRGKKADELEKI
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: RPGGKKKYRLKHIVWAAN
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: DRFGLAESLLESKEG
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: TGSENLKSLFNTVCVIWCI
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: HAEEKAKDTEEAK
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: LQRIQLPQKEVWTVNDIQKLVGVLNWAAQIYPGIKTRNLCRLIRGKMTLTEEVQWTELAEAEL
type: DOMAIN
name: RVT_thumb
description: Reverse transcriptase thumb

phrase: GCWKCGKAGHIMAKCP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: IKCWNCGKEGHSARQC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: QVNAELGTWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTVETIVLMAVHCMNFKRRGGIGDMTPAERLINM
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: WKRPVVTAHVEGQPVEVLLDTGADDSIVAGVELGSNYSPKIVGGIGGFINTKEYKNVEIRVLNKRVRATIMTGDTPINIFGRNILTALGMS
type: DOMAIN
name: Retropepsins
description: Retropepsins

phrase: KCWNCGKEGHSARQC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: EKIEPAQEEHEKYHSNVKELSHKFGLPKLVARQIVNTCTQC
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: FRVYFREGRDQLWKGPGELLWKGDGAVIVKVGADIKIIPRRKAKIIK
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: ETFYTDGSCNKQSREGKAGYITDRGRDKVRLLEQTTNQQAELEAFAMAVTDSGPKANIIVDSQYVMGIVAGQPTESESKIVNQIIEEMIKKEAIYVAWVPAHKGIGGNQEVDHLVSQG
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: EGQLEEAPPTNPYNTPTFAIKKKDKNKWRMLIDFRELNKVTQDFTEIQLGIPHPAGLAKKKRITVLDVGDAYFSIPLHEDFRQYTAFTLPSINNAEPGKRYIYKVSPQGWKGSPAIFQYTMRQVLEPFRKANPDIILIQYMDDILIASDRTDLEHDRVVLQLKELLNGLGFSTPDEKFQKDPPYQWMGYE
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: IKKKDKNKWRMLIDFRELNKVTQDFTEIQLGIPHPAGLAKKKRITVLDVGDAYFSIPLHEDFRQYTAFTLPSINNAEPGKRYIYKVSPQGWKGSPAIFQYTMRQVLEPFRKANPDIILIQYMDDILIASDRTDLEHDRVVLQLKELLNGLGFSTPDEKFQKDPPYQWMGY
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain