nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MKLTPMMQQYLEVKEKCKDCILFFRLGDFYEMFFEDAETASKELELVLTGRDCGLSKRAPMCGIPYHSASNYINRLVSKGYKIAICEQLEDPSAAKGIVKRDIVKIVTPGTYSDSNFLNETKNNYIMSLYIEDKSVAMCFCDISTGDFFATSHSLDKSIILDEISKFDPSELLLNKDIDKNILKEIKNRFTISITNLEKDYFKDYNLLEGQFSDFSKEEYSLVLIKCGNGLLKYILETQKMSLGHIDCFKNYNIVDYLSMDINSRRNLEITETIRDKSRKGSLLWVLDKCSTAMGARLIRNWVEQPLINKEKIDKRLNAVEELVLNISLHEDLKDALKDIYDIQRIVGKISSKNVNAKELLSLKNSIEKLPYIKDILSKLEADLFKDMLSNLDELKDIYELLESSIMDNPPITIKDGNLIKNGFNKEIDELRMAKSHGKEWIANLESSEREFTGIKSLKVGYNKVFGYFIEVTKSNISSVPEGRYVRKQTLSNCERYITPELKEMEDKILGAEEKLISLEYEVFVSIRNSIEKDIDRMKISANIVAILDCLSSLSTVALENNYSKPKILEGNDIIIKDGRHPVVEKMIPTGSFVANDTTMDTEDNQMLLITGPNMAGKSTYMRQVALITIMAQIGSFVPAKEASISLCDKIFTRIGASDDLSAGKSTFMVEMWEVSNILKNATSKSLIILDEVGRGTSTFDGLSIAWAVIEYICNNKNLRSKTLFATHYHELIQLENKIKGVKNYSVSVKEMDKDIVFLRKIIEGGADQSYGIEVAKLAGLPEDVIIRAKEILNSIEQNKDNKIELDDIKENKNHIEKENKKEIATDKLLANDDFQISFTQIEEENLIKEISSIDILNLNPMEGFNKLYDLINKAKSIEKK

Annotated regions:
phrase: TPMMQQYLEVKEKCKDCILFFRLGDFYEMFFEDAETASKELELVLTGRDCGLSKRAPMCGIPYHSASNYINRLVSKGYKIAICEQLEDPSAAKGIVKRDIVKIVTPGTYSD
type: DOMAIN
name: DNA_mismatch_repair_MutS-lik_N
description: DNA mismatch repair protein MutS-like, N-terminal

phrase: SLIILDEVGRGTSTFD
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: NSRRNLEITETIRDKSRKGSLLWVLDKCSTAMGARLIRNWVEQPLINKEKIDKRLNAVEELVLNISLHEDLKDALKDIYDIQRIVGKISSKNVNAKELLSLKNSIEKLPYIKDILSKLEADLFKDMLSNLDELKDIYELLESSIMDNPPITIKDGNLIKNGFNKEIDELRMAKSHGKEWIANLESSEREFTGIKSLKVGYNKVFGYFIEVTKSNISSVPEGRYVRKQTLSNCERYITPELKEMEDKILGAEEKLISLEYEVFVSIRNSIEKDIDRMKISANIVAILDCLSSL
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: SRKGSLLWVLDKCSTAMGARLIRNWVEQPLINKEKIDKRLNAVEELVLNISLHEDLKDALKDIYDIQRIVGKISSKNVNAKELLSLKNSIEKLPYIKDILSKLEADLFKDMLSNLDELKDIYELLESSIMDNPPITIKDGNLIKNGFNKEIDELRMAKSHGKEWIANLESSEREFTGIKSLKVGYNKVFGYFIEVTKSNISSVPEGRYVRKQTLSNCERYITPELKEMEDKILGAEEKLISLEYEVFVSIRNSIEKDIDRMKISANIVAILDCLSSLSTVALENNYSKPKILEGNDIIIKDGRHPVVEK
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: NYIMSLYIEDKSVAMCFCDISTGDFFATSHSLDKSIILDEISKFDPSELLLNKDIDKNILKEIKNRFTISITNLEKDYFKDYNLLEGQFSDFSKEEYSLVLIKCGNGLLKYILETQKMSLGHI
type: DOMAIN
name: DNA_mmatch_repair_MutS_con_dom
description: DNA mismatch repair protein MutS, connector domain

phrase: LITGPNMAGKSTYMRQVALITIMAQIGSFVPAKEASISLCDKIFTRIGASDDLSAGKSTFMVEMWEVSNILKNATSKSLIILDEVGRGTSTFDGLSIAWAVIEYICNNKNLRSKTLFATHYHELIQLENKIKGVKNYSVSVKEMDKDIVFLRKIIEGGADQSYGIEVAKLAGLPEDVIIRAKEILNSI
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: NQMLLITGPNMAGKSTYMRQVALITIMAQIGSFVPAKEASISLCDKIFTRIGASDDLSAGKSTFMVEMWEVSNILKNATSKSLIILDEVGRGTSTFDGLSIAWAVIEYICNNKNLRSKTLFATHYHELIQLENKIKGVKNYSVSVKEMDKDIVFLRKIIEGGADQSYGIEVAKLAGLPEDVIIRAKEIL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: GFNKEIDELRMAKSHGKEWIANLESSEREFTGIKSLKVGYNKVFGYFIEVTKSNISSVPEGRYVRKQTLSNCERYITPELKEMEDKILGAEE
type: DOMAIN
name: DNA_mismatch_repair_MutS_clamp
description: DNA mismatch repair protein MutS, clamp
Protein sequence:
MRNCCRECGLSAGHLEPEASSNCASDVKSSPDMDSVSSQDSLYLPNTVGASLEDQDLWSQFHQEGTEMIITKSGRRMFPQCKIRLFGLHPYAKYMLLVDFVPLDNFRYKWNKNQWEAAGKAEPHPPCRTYVHPDSPAPGAHWMKDPICFQKLKLTNNTLDQQGHIILHSMHRYKPRFHVVQSDDMYNSPWGLVQVFSFPETEFTSVTAYQNEKITKLKINHNPFAKGFREQERSHKRDDVLKILQQSPSKRQKRKKWEDSPEADISDFPKAICVKEESIMDPAGVYQNWVSDHEANQGLTPHSPESEGANQEQQVPTSSSNFYNKSHYRRSSQHLSSPFELGEPSSRRLTPDIATVPDSDPDSLAVFHVIPTQNSAPERTCSMNFSMEAPMKQPLRGAMYSPYGADQWLVPAQGQYRPVGYTAYPTDLSTQGAVAHPHSAMSDWSQYSLFPYSCW

Annotated regions:
phrase: LEDQDLWSQFHQEGTEMIITKSGRRMFPQCKIRLFGLHPYAKYMLLVDFVPLDNFRYKWNKNQWEAAGKAEPHPPCRTYVHPDSPAPGAHWMKDPICFQKLKLTNNTLDQQGHIILHSMHRYKPRFHVVQSDDMYNSPWGLVQVFSFPETEFTSVTAYQNEKITKLKINHNPFAKGFR
type: DOMAIN
name: T-box_DNA-bd
description: T-box transcription factor, DNA-binding domain

phrase: TEFTSVTAYQNEK
type: DOMAIN
name: T-box_DNA-bd
description: T-box transcription factor, DNA-binding domain

phrase: ILHSMHRYKPRFHV
type: DOMAIN
name: T-box_DNA-bd
description: T-box transcription factor, DNA-binding domain

phrase: YVHPDSPAPGAHW
type: DOMAIN
name: T-box_DNA-bd
description: T-box transcription factor, DNA-binding domain

phrase: ICFQKLKLT
type: DOMAIN
name: T-box_DNA-bd
description: T-box transcription factor, DNA-binding domain

phrase: NPFAKGFR
type: DOMAIN
name: T-box_DNA-bd
description: T-box transcription factor, DNA-binding domain

phrase: GTEMIITKSGRRMFPQCKIRLFGL
type: DOMAIN
name: T-box_DNA-bd
description: T-box transcription factor, DNA-binding domain

phrase: TVGASLEDQDLWSQFHQEGTEMIITKSGRRMFPQCKIRLFGLHPYAKYMLLVDFVPLDNFRYKWNKNQWEAAGKAEPHPPCRTYVHPDSPAPGAHWMKDPICFQKLKLTNNTLDQQGHIILHSMHRYKPRFHVVQSDDMYNSPWGLVQVFSFPETEFTSVTAYQNEKITKLKINHNPFAKGFREQERS
type: DOMAIN
name: T-box_DNA-bd
description: T-box transcription factor, DNA-binding domain

phrase: VHPDSPAPGAHWMKDPIC
type: CONSERVED_SITE
name: TF_T-box_CS
description: Transcription factor, T-box, conserved site

phrase: SLEDQDLWSQFHQEGTEMIITKSGRRMFPQCKIRLFGLHPYAKYMLLVDFVPLDNFRYKWNKNQWEAAGKAEPHPPCRTYVHPDSPAPGAHWMKDPICFQKLKLTNNTLDQQGHIILHSMHRYKPRFHVVQSDDMYNSPWGLVQVFSFPETEFTSVTAYQNEKITKLKINHNPFAKGFR
type: DOMAIN
name: T-box_DNA-bd
description: T-box transcription factor, DNA-binding domain

phrase: LWSQFHQEGTEMIITKSGR
type: CONSERVED_SITE
name: TF_T-box_CS
description: Transcription factor, T-box, conserved site
Protein sequence:
MRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTANYPARKFGVRSAMPTGMALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSLDEAYLDVTDSVHCHGSATLIAQEIRQTIFSELQLTASAGVAPVKFLAKIASDMNKPNGQFVITPAEVPAFLQTLPLAKIPGVGKVSAAKLEAMGLRTCGDVQKCDLVILLKRFGKFGRILWERSQGIDERDVNSERLRKSVGVERTMAEDIHHWSECEAIIERLYPELERRLAKVKPDLLIARQGVKLKFDDFQQTTQEHVWPRLNKADLIATARKTWDERRGGRGVRLVGLHVTLLDPQMERQLVLGL

Annotated regions:
phrase: IIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTANYPARKFGVRSAMPTGMALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSLDEAYLDVTDSVHCHGSATLIAQEIRQTIFSELQLTASAGVAPVKFLAKIASDMNKPNGQFVITPAEVPAFLQTLPLAKIPGV
type: DOMAIN
name: UmuC
description: UmuC domain

phrase: RKSVGVERTMAEDIHHWSECEAIIERLYPELERRLAKVKPDLLIARQGVKLKFDDFQQTTQEHVWPRLNKADLIATARKTWDERRGGRGVRLVGLHVTLLDPQMERQ
type: DOMAIN
name: DNA_pol_Y-fam_little_finger
description: DNA polymerase, Y-family, little finger domain

phrase: KIPGVGKVSAAKLEAMGLRTCGDVQKCDLVILLKRFGKFGRILWERSQGI
type: DOMAIN
name: IMS_HHH_1
description: DNA polymerase IV/DNA polymerase iota-like, thumb domain

phrase: VDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTANYPARKFGVRSAMPTGMALKLCPHLTLLPGRFDAYKEASNHIREIFSRYTSRIEPLSLDEAYLDVTDSVHCHGSATLIAQEIRQTIFSELQLTASAGVAPVKFLAKIAS
type: DOMAIN
name: UmuC
description: UmuC domain
Protein sequence:
MMSTSDAPLDPVEFIHSRIRTVPDWPQPGVMFRDITPLLQSAKALRVLVDLFVERYVDANLDYIAGLDARGFIIAPIVAYELSVGFVPIRKVGKLPYATQRESYALEYGTATVEIHEDACKPGDRVVIVDDLIATGGTMMAGKNLLERLGAVVVEGAAIVDLPDLGGSALLREAGLPLYTVTEFPGH

Annotated regions:
phrase: DLFVERYVDANLDYIAGLDARGFIIAPIVAYELSVGFVPIRKVGKLPYATQRESYALEYGTATVEIHEDACKPGDRVVIVDDLIATGGTMMAGKNLLERLGAVVVEGAAIV
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: ALRVLVDLFVERYVDANLDYIAGLDARGFIIAPIVAYELSVGFVPIRKVGKLPYATQRESYALEYGTATVEIHEDACKPGDRVVIVDDLIATGGTMMAGKNLLERLGAVVVEGAAIVDLPDLGGSALLREAGLPLYT
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain
Protein sequence:
MQIKSRIRTIAHYPHEGIMFRDITTLLKDPVGLRATIQEIASRYKSMKIDKVAGIESRGFIIGAPVAYELGVGFVPVRKKGKLPAETRGRDYQLEYGSDRIEIHVDAIQKGDRVLLVDDLIATGGTAEAAAGLIHEMGGEVVECSFVIDLPDIGGRARLEDQGLKVFALCEFEGN

Annotated regions:
phrase: IQEIASRYKSMKIDKVAGIESRGFIIGAPVAYELGVGFVPVRKKGKLPAETRGRDYQLEYGSDRIEIHVDAIQKGDRVLLVDDLIATGGTAEAAAGLIHEMGGEVVECSFVIDLPDIGGRARLEDQGLKVFALC
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: ASRYKSMKIDKVAGIESRGFIIGAPVAYELGVGFVPVRKKGKLPAETRGRDYQLEYGSDRIEIHVDAIQKGDRVLLVDDLIATGGTAEAAAGLIHEMGGEVVECSFVI
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain
Protein sequence:
MVQKRNHFLPYSLPLIGKEEIQEVTETLESGWLSKGPKVQQFEKEFAAFVGAKHAVAVNSCTAALFLALKAKGIGPGDEVITSPLTFSSTANTIIHTGATPVFADIDENTLNIDPVKLEAAVTPRTKAVVPVHFGGQSCDMDAILAVAQNHGLFVLEDAAHAVYTTYKQRMIGSIGDATAFSFYATKNLATGEGGMLTTDDEELADKIRVLSLHGMSKAAWNRYSSNGSWYYEVESPGYKMNMFDLQAALGLHQLKRLDDMQKRREEIAGRYQTAFQQIPGLITPFVHDDGRHAWHLYVLQVDEKKAGVTRSEMITALKDEYNIGTSVHFIPVHIHPYYQKQFGYKEADFPNAMNYYKRTLSLPLYPSMSDDDVDDVIEAVRDIVKGAD

Annotated regions:
Protein sequence:
MDSTGTGAGGKGKKGAAGRKVGGPRKKSVSRSVKAGLQFPVGRIGRYLKKGRYAQXVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAIRNDEELGKLLGGVTIAHGGVLPNINPVLLPKKTAEKASSGGSKEAKSPKKAAKSPKKA

Annotated regions:
phrase: RKKSVSRSVKAGLQFPVGRIGRYLKKGRYAQXVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHVLLAI
type: DOMAIN
name: Histone_H2A/H2B/H3
description: Histone H2A/H2B/H3

phrase: AGLQFP
type: CONSERVED_SITE
name: Histone_H2A_CS
description: Histone H2A conserved site

phrase: EELGKLLGGVTIAHGGVLPNINPVLLPKKTAEK
type: DOMAIN
name: Histone_H2A_C
description: Histone H2A, C-terminal domain
Protein sequence:
MIVGLRGTIIRLEPMYAEIDVGGVIYGMQMSLNATSMLQTKIDSQPDAPVKIICAQIIREDAHLLFGFCEEIEKQTFERLIKISGVGPKVAIAILSTYTPTHFAKIIADKDIEALKKVPGIGVKGAAKIMVDIAGFFAQLLQSQEESIAPSNNLKYEASLALQSLGFKRNEIQKVLEHIEALSVSEIVKEALKRLA

Annotated regions:
phrase: EASLALQSLGFKRNEIQKVLEHIEALSVSEIVKEAL
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal

phrase: EALKKVPGIGVKGAAKIMV
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: ERLIKISGVGPKVAIAILS
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: EASLALQSLGFKRNEIQKVLEHIEALSVSEIVKEALKR
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal

phrase: MIVGLRGTIIRLEPMYAEIDVGGVIYGMQMSLNATSMLQTKIDSQPDAPVKIICAQIIREDAHLLF
type: DOMAIN
name: DNA_helicase_Holl-junc_RuvA_I
description: DNA helicase, Holliday junction RuvA type, domain I, bacterial
Protein sequence:
MADREGGCAAGRGRELEPELEPGPGPGSALEPGEEFEIVDRSQLPGPGDLRSATRPRAAEGWSAPILTLARRATGNLSASCGSALRAAAGLGGGDSGDGTARAASKCQMMEERANLMHMMKLSIKVLLQSALSLGRSLDADHAPLQQFFVVMEHCLKHGLKVKKSFIGQNKSFFGPLELVEKLCPEASDIATSVRNLPELKTAVGRGRAWLYLALMQKKLADYLKVLIDNKHLLSEFYEPEALMMEEEGMVIVGLLVGLNVLDANLCLKGEDLDSQVGVIDFSLYLKDVQDLDGGKEHERITDVLDQKNYVEELNRHLSCTVGDLQTKIDGLEKTNSKLQEELSAATDRICSLQEEQQQLREQNELIRERSEKSVEITKQDTKVELETYKQTRQGLDEMYSDVWKQLKEEKKVRLELEKELELQIGMKTEMEIAMKLLEKDTHEKQDTLVALRQQLEEVKAINLQMFHKAQNAESSLQQKNEAITSFEGKTNQVMSSMKQMEERLQHSERARQGAEERSHKLQQELGGRIGALQLQLSQLHEQCSSLEKELKSEKEQRQALQRELQHEKDTSSLLRMELQQVEGLKKELRELQDEKAELQKICEEQEQALQEMGLHLSQSKLKMEDIKEVNQALKGHAWLKDDEATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSSNELALPSYPKPVRVCDSCHTLLLQRCSSTAS

Annotated regions:
phrase: QFFVVMEHCLKHGLKVKKSFIGQNKSFFGPLELVEKLCPEASDIATSVRNLPELKTAVGRGRAWLYLALMQKKLADYLKVLIDNKHLLSEFYEPEALMMEEEGMVIVGLLVGLNVLDANLCL
type: DOMAIN
name: Run_dom
description: RUN domain

phrase: DDEATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSSNELALPSYPKPVRVCDSCHTLL
type: DOMAIN
name: Znf_FYVE-rel
description: Zinc finger, FYVE-related

phrase: DADHAPLQQFFVVMEHCLKHGLKVKKSFIGQNKSFFGPLELVEKLCPEASDIATSVRNLPELKTAVGRGRAWLYLALMQKKLADYLKVLIDNKHLLSEFYEPEALMMEEEGMVIVGLLVGLNVLDANLCLKG
type: DOMAIN
name: Run_dom
description: RUN domain

phrase: LKGHAWLKDDEATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSSNELALPSYPKPVRVCDSCHTLLLQRC
type: DOMAIN
name: FYVE_RUFY1
description: RUN and FYVE domain-containing protein 1, FYVE domain

phrase: CRQCEKEFSISRRKHHCRNCGHIFCNTCSSNELALPSYPKPVRVCDSC
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: ERANLMHMMKLSIKVLLQSALSLGRSLDADHAPLQQFFVVMEHCLKHGLKVKKSFIGQNKSFFGPLELVEKLCPEASDIATSVRNLPELKTAVGRGRAWLYLALMQKKLADYLKVLIDNKHLLSEFYEPEALMMEEEGMVIVGLLVGLNVLDANL
type: DOMAIN
name: RUN_RUFY1
description: RUN and FYVE domain-containing protein 1, RUN domain

phrase: WLKDDEATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSSNELALPSYPKPVRVCDSCHT
type: DOMAIN
name: Znf_FYVE
description: FYVE zinc finger

phrase: GRAWLYLALMQKKLADYLKVLIDNKHLLSEFYEPEALMMEEEGMVIVGLLVGLNVLDANLCL
type: DOMAIN
name: Run_dom
description: RUN domain

phrase: LKGHAWLKDDEATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSSNELALPSYPKPVRVCDSCHTLLL
type: DOMAIN
name: Znf_FYVE
description: FYVE zinc finger
Protein sequence:
MTAQDIISWLNRHVARSAHLGLDSRQLHAGDVFFACPGLASDGRAYVQSAIEQGASAIVFQAGSPVPGMSIPCIEVPDLSEKLGLIAHLWYGEPSLALSVVAVTGTNGKTTCVQWIASALNAEGVSCGTVGTLGVTLPDGSNLGGALTTPDVLTMHRSLAVMRDAGAAVVALEASSIGIHQGRLDHVHIEIAGFTNLTHDHLDYHGTLQDYKAAKFALFDSPGLRAAVINADDSAGRELLSLAPLVNALSYSLGSADTADLQAHDIQTGAYGVVFNLLALGGKAQLLTRLVGEHNVSNLLLVAGVLQELGWGLPRIARVLATLQCVEGRLQVVEAPAGDAASAAMVVVDYAHTPDALERALLALRDLATARGGRLVCVFGCGGGRDSSKRPIMGKIAATHADRVILTNDNPRMEDPLEIIHQISADMQHAPRIEPDRALAILSAVWTAAAADVVLLAGKGHETYQEAKGLRVPFDDREWARFALALRRGLTLSTDSRHIQAGQLFVALKGDAFDGHAYLAQVMQAGACAAIVEHKDDSLALPQFVLGDTRLALIRISTAWRRLFTLPLIGVTGSNGKTTTKEMIASIFRAWLTPDASLATQGNLNNDIGVPLTLLRLNDQHRAAVVELGMNHPGEIAVLSRIAQPTVALVNNAQREHQEFMHTVEAVAMENGTVIQELPRDGVAVFPGDDAYTGLWTSLAGERKIVDFGFDSQFAVHADQIHAEPTRTLCRLHTPAGDADLALAAPGLHNLRNALAAAACACAAGAAV

Annotated regions:
phrase: VTGTNGKTTCVQWIASALNAEGVSCGTVGTLGVTLPDGSNLGGALTTPDVLTMHRSLAVMRDAGAAVVALEASSIGIHQGRLDHVHIEIAGFTNLTHDHLDYHGTLQDYKAAKFALFDSPGLRAAVINADDSAGRELLSLAPLVNALSYSLGSADTADLQAHDIQTGAYGVVFNLLALGGKAQLLTRLVGEHNVSNLLLVAG
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: VTGSNGKTTTKEMIASIFRAWLTPDASLATQGNLNNDIGVPLTLLRLNDQHRAAVVELGMNHPGEIAVLSRIAQPTVALVNNAQREHQEFMHTVEAVAMENGTVIQELPRDGVAVFPGDDAYTGLWTSLAGERKIVDFGFDSQFAVHADQIHAEPTRTLCRLHTPAGDADLALAAPGLHNLRNALAAAAC
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: LSTDSRHIQAGQLFVALKGDAFDGHAYLAQVMQAGACAAIVEHK
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: HLGLDSRQLHAGDVFFACPGLASDGRAYVQSAIEQGASAIVFQAGSPVPGMSIPCIEVPDLSEKLGLIAHL
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: GRLQVVEAPAGDAASAAMVVVDYAHTPDALERALLALRDLATARGGRLVCVFGCGGGRDSSKRPIMGKIAATHADRVILTNDNPRMEDPLEIIHQISADMQHAPRIEPDRALAILSAVWTAAAADVVLLAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MKNLTDSFVFLGHWPSAGSFGFNTDILATNLINLSVVLGVLIFFGKGVLSDLLDNRKQRILSTIRNSEELCGGAVEQLEKARARLRKVEREAEEFRVNGYSEIEQEKMNLINAAYQNLEQLENYKNETIHFEQQRAINQVQQRVFQQALQGALGTLNNCLNGELHLRTIGANIGILGAMKEITD

Annotated regions:
Protein sequence:
MEGKVDLMNMEIDELEGFVLSLGEPKFRARQIFEWVNKGVKDIDSMTNLSKDLRENLKRNAYINNFEIVKKLISKIDGTRKYIFKLYDNDVIESVLMKYSYGFSVCISSQAGCRMGCSFCASTGAGFKRNLTAGEMLDQVLTIKNDIKERIGNIVIMGIGEPFDNYDNLIKFLRLVNHKDGLNIGFRYITVSTCGLVPQILKFSKENMPVTLSVSLHAPDDETRSKIMPVNNKYPLDKLVEACKIYTMITNRRITFEYSLINGINDSSGHAEKLVSLIKGMLCHVNLIPVNTVSNTGYKRSSRESIEMFKNILEKHGIKVTIRRGLGRDIDAACGQLRRNIIN

Annotated regions:
phrase: VDLMNMEIDELEGFVLSLGEPKFRARQIFEWVNKGVKDIDSMTNLSKDLRENLKRNAY
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: SSQAGCRMGCSFCASTGAGFKRNLTAGEMLDQVLTIKNDIKERIGNIVIMGIGEPFDNYDNLIKFLRLVNHKDGLNIGFRYITVSTCGLVPQILKFSKENMPVTLSVSLHAPDDETRSKIMPVNNKYPLDKLVEACKIYTMITNRRITFEYSLINGIND
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: YSYGFSVCISSQAGCRMGCSFCASTGAGFKRNLTAGEMLDQVLTIKNDIKERIGNIVIMGIGEPFDNYDNLIKFLRLVNHKDGLNIGFRYITVSTCGLVPQILKFSKENMPVTLSVSLHAPDDETRSKIMPVNNKYPLDKLVEACKIYTMITNRRITFEYSLINGINDSSGHAEKLVSLIKGMLCHVNLIPVNTVSNTGYKRSSRESIEMFKNILEKHGIKVTIRRGLGR
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MTHFNKGPSYGLSAEVKNKIASKYDHQAEEDLRNWIEEVTGMSIGPNFQLGLKDGIILCELINKLQPGSVKKVNESSLNWPQLENIGNFIKAIQAYGMKPHDIFEANDLFENGNMTQVQTTLVALAGLAKTKGFHTTIDIGVKYAEKQTRRFDEGKLKAGQSVIGLQMGTNKCASQAGMTAYGTRRHLYDPKMQTDKPFDQTTISLQMGTNKGASQAGMLAPGTRRDIYDQKLTLQPVDNSTISLQMGTNKVASQKGMSVYGLGRQVYDPKYCAAPTEPVIHNGSQGTGTNGSEISDSDYQAEYPDEYHGEYQDDYPRDYQYSDQGIDY

Annotated regions:
phrase: QAEEDLRNWIEEVTGMSIGPNFQLGLKDGIILCELINKLQPGSVKKVNESSLNWPQLENIGNFIKAIQAYGMKPHDIFEANDLFENGNMTQVQTTLVALAG
type: DOMAIN
name: CH_dom
description: Calponin homology domain

phrase: ISLQMGTNKGASQAGMLAPGTRRD
type: REPEAT
name: Calponin_repeat
description: Calponin repeat

phrase: ISLQMGTNKVASQKGMSVYGLGRQ
type: REPEAT
name: Calponin_repeat
description: Calponin repeat

phrase: IGLQMGTNKCASQAGMTAYGTRRH
type: REPEAT
name: Calponin_repeat
description: Calponin repeat

phrase: ISLQMGTNKVASQKGMSVYGLGRQV
type: REPEAT
name: Calponin_repeat
description: Calponin repeat

phrase: HQAEEDLRNWIEEVTGMSIGPNFQLGLKDGIILCELINKLQPGSVKKVNESSLNWPQLENIGNFIKAIQAYGMKPHDIFEANDLFENGNMTQVQTTLVALAGLA
type: DOMAIN
name: CH_dom
description: Calponin homology domain

phrase: IGLQMGTNKCASQAGMTAYGTRRHL
type: REPEAT
name: Calponin_repeat
description: Calponin repeat

phrase: ISLQMGTNKGASQAGMLAPGTRRDI
type: REPEAT
name: Calponin_repeat
description: Calponin repeat

phrase: AEEDLRNWIEEVTGMSIGPNFQLGLKDGIILCELINKLQPGSVKKVNESSLNWPQLENIGNFIKAIQAYGMKPHDIFEANDLFENGNMTQVQTTLVA
type: DOMAIN
name: CH_dom
description: Calponin homology domain

phrase: IGLQMGTNKCASQAGMTAY
type: REPEAT
name: Calponin_repeat
description: Calponin repeat

phrase: ISLQMGTNKVASQKGMSVY
type: REPEAT
name: Calponin_repeat
description: Calponin repeat
Protein sequence:
MSTAMNFGSKSFQPRPPDKGSFPLDHFGECKSFKEKFMKCLRDNNFENALCRNESKEYLECRMERQLMAQEPLEKLGFGDLIDGKSDKN

Annotated regions:
phrase: CKSFKEKFMKCLRDNNFENALCRNESKEYLECRM
type: DOMAIN
name: CHCH
description: CHCH
Protein sequence:
MLGILLQKATATLASGLNSSRAGMFPIALGLLLQLFFDHALAESTFLDKAFSLQAALLPMEHKKRSVNKCCLLTPPPPPMFPPPFFTETNILQEVDLNNLPLEIKPTEPSCKITCIIGPPGPSGPQGPQGIQGIMGPKGEIGEIGRPGRKGRPGVRGPRGMPGSPCSPGPIGPRGEKGDIGLTGLPGARGPMGPKGLTGQKGEKGIIGEKGQQGIKGEMGVMGLPGMLGQKGEMGPKGVSGAPGHRGPVGRPGKRGKTGLKGDIGPPGIMGPSGPPGPSGLPVMSGSGHLMVGPKGERGLPGPVGRCDCNLPQTVVNPSYNKFPTLINPPQVPAIFVVDSEDELEKLNTENALAFRKDQKSLYYRDTVGWLPIQIAPIQQMRQNPTGFCGDEIVQVENGEECDDGNRIVTDSCINCKQAYCGDGYLQSGLEECDGKDFGYHTCKSYLPGSYGELKCTSYCYIDSTGCRYFT

Annotated regions:
phrase: GPPGPSGPQGPQGIQGIMGPKGEIGEIGRPGRKGRPGVRGPRGMPGSPCSPGPIGPRG
type: REPEAT
name: Collagen
description: Collagen triple helix repeat
Protein sequence:
MAFTMQTGDLKKLKYFIDFALENPTFLNMPQLQFVKDFVEKFGGTVPPGQFNGGSAGGKCPFGGVAGAKANEPANAPEDSEDEKSLSDPESDVELDMEGVIEADSDPAQPMGNYSKKATEEEVEQASELRAQAASAYGQQKFDEAIALYTKAIELSPGNALFHAKRGQAFLKLKKPNACIRDCDVALELNSDLAAGYKFRGRARRLLGDFELAAHDLRQACKLDFDEETDEWLKEVTPNAKKIEQHRLKQERRQAERKIKERQRDQRRARKEQEKHNASSGGSSGEFSGGNPGNGNMSDILGAMSDPEVSAAIQDILSNPGNITKYASNPKIYNLIKKIVPGGDVGAAFGQAGEKAGKPSEPKPKKDSADFVDDGLD

Annotated regions:
phrase: LKKLKYFIDFALENPTFLNMPQLQFVKDFVEKFGGTV
type: DOMAIN
name: Hip_N
description: Hsp70-interacting protein, N-terminal

phrase: ASELRAQAASAYGQQKFDEAIALYTKAIELSPG
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: NGNMSDILGAMSDPEVSAAIQDILSNPGNITKYASNPKIYNL
type: DOMAIN
name: STI1_HS-bd
description: Heat shock chaperonin-binding

phrase: DLKKLKYFIDFALENPTFLNMPQLQFVKDFVEKFGGTV
type: DOMAIN
name: Hip_N
description: Hsp70-interacting protein, N-terminal

phrase: ALFHAKRGQAFLKLKKPNACIRDCDVALELNSD
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: ASELRAQAASAYGQQKFDEAIALYTKAIELSPG
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: AAGYKFRGRARRLLGDFELAAHDLRQACKLDFD
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat
Protein sequence:
MVKNLIFWLVITVVLMSIFQNFNTNDVNNHKVDYSTFLSEVNQDQIREAYINGRMISVTKKDSSKYTTYIPINDPKLLDNLLVKRVKIIGAIPEEPSLFISILISWFPMLLLIGVWIFFMRQMQMGGGKGAMSFGKSKARMLSEDQIQTTFADVAGCDEAKEEVSELVEYLKEPSRFQKLGGKIPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKSAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPALLRPGRFDRQVIVALPDIRGREQILKVHMRKVPLSKDVDPMIIARGTPGFSGADLANLVNEAALFAARLDKRVVSMLEFERAKDKMMMGSERRSMVMSDFQKESTAYHEAGHVIIGRLVPDHDPAHKVTIIPRGRALGVTFFLPESDTLSISRQKLESQISTLYGGRLAEEIIYGAKNVSTGAYNDIKIATSLAKNMVTQWGFSEKLGPLLYAEEEGEIFLGRSVAKAKHMSDETARIIDEEVKLLIEINYSRARNILNENIDILHAMKEALIKYETIDAFQIDDLMKRREVRQPKGWIETDTNK

Annotated regions:
phrase: DVDPMIIARGTPGFSGADLANLVNEAALFAARLDKRVVSMLEF
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: IPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKSAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPALLRPGRFDRQVIVALP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: MVMSDFQKESTAYHEAGHVIIGRLVPDHDPAHKVTIIPRGRALGVTFFLPESDTLSISRQKLESQISTLYGGRLAEEIIYGAKNVSTGAYNDIKIATSLAKNMVTQWGFSEKLGPLLYAEEEGEIFLGRSVAKAKHMSDETARIIDEEVKLLIEINYSRARNILNENIDILHAMKEALIKYETIDAFQID
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: LIFWLVITVVLMSIFQNFNTNDVNNHKVDYSTFLSEVNQDQIREAYINGRMISVTKKDSSKYTTYIPINDPKLLDNLLVKRV
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular

phrase: IILIAATNRPDVLDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: ILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKSAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPALLRPGRFDRQVI
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core
Protein sequence:
MFKPKAIAVDIDGTLTDRKRALNCRAVEALRKVKIPVILATGNISCFARAAAKLIGVSDVVICENGGVVRFEYDGEDIVLGDKEKCVEAVRVLEKHYEVELLDFEYRKSEVCMRRSFDINEARKLIEGMGVKLVDSGFAYHIMDADVSKGKALKFVAERLGISSAEFAVIGDSENDIDMFRVAGFGIAVANADERLKEYADLVTPSPDGEGVVEALQFLGLLR

Annotated regions:
Protein sequence:
MKKHLLPLALLFSGISPAQALDVGDISSFMNSDSSTLSKTIQNSTDSGRLINIRLERLSSPLDDGQVIAMDKPDELLLTPASLLLPAQASEVIRFFYKGPADEKERYYRIVWFDQALSDAQRDNANRSAVATASARIGTILVVAPRQANYHFQYANGSLTNTGNATLRILAYGPCLKAANGKECKENYYLMPGKSRRFTHVDTADNKGRVALWQGDKFIPVK

Annotated regions:
phrase: HFQYANGSLTNTGNATLRILAYGPCLKAANGKECKENYYLMPGKSRRFTHVDTADNKGRVALWQGDKFIP
type: DOMAIN
name: EcpB_C
description: EcpB, C-terminal
Protein sequence:
MSPSMSIEALDQPVKPVVFRPLTLRRRIKNSVATTFFFTSFVVALIPLVWLLWVVIARGWFAVTRSGWWTHSLRGVLPEQFAGGVYHALYGTLVQAGVAAVLAVPLGLMTAVYLVEYGTGRMSRVTTFTVDVLAGVPSIVAALFVFSLWIATLGFQQSAFAVALALVLLMLPVVVRAGEEMLRLVPDELREASYALGVPKWKTIVRIVAPIAMPGIVSGILLSIARVVGETAPVLVLVGYSHSINLDVFHGNMASLPLLIYTELTNPEHAGFLRVWGAALTLIIVVATINLAAAMIRFVATRRRRLPL

Annotated regions:
phrase: AVPLGLMTAVYLVEYGTGRMSRVTTFTVDVLAGVPSIVAALFVFSLWIATLGFQQSAFAVALALVLLMLPVVVRAGEEMLRLVPDELREASYALGVPKWKTIVRIVAPIAMPGIVSGILLSIARVVGETAPVLVLVGYSHSINLDVFHGNMASLPLLIYTELTNPEHAGFLRVWGAALTLIIVVATINLAAAMIRFVATR
type: DOMAIN
name: MetI-like
description: ABC transporter type 1, transmembrane domain MetI-like

phrase: LYGTLVQAGVAAVLAVPLGLMTAVYLVEYGTGRMSRVTTFTVDVLAGVPSIVAALFVFSLWIATLGFQQSAFAVALALVLLMLPVVVRAGEEMLRLVPDELREASYALGVPKWKTIVRIVAPIAMPGIVSGILLSIARVVGETAPVLVLV
type: DOMAIN
name: MetI-like
description: ABC transporter type 1, transmembrane domain MetI-like

phrase: LYGTLVQAGVAAVLAVPLGLMTAVYLVEYGTGRMSRVTTFTVDVLAGVPSIVAALFVFSLWIATLGFQQSAFAVALALVLLMLPVVVRAGEEMLRLVPDELREASYALGVPKWKTIVRIVAPIAMPGIVSGILLSIARVVGETAPVLVLVGYSHSINLDVFHGNMASLPLLIYTELTNPEHAGFLRVWGAALTLIIVVATINLAAAMI
type: DOMAIN
name: MetI-like
description: ABC transporter type 1, transmembrane domain MetI-like
Protein sequence:
MNHDKSPIILIGFMGTGKSTIGKYVADEQNLSFIDIDSYIEEKYKLTIPEIFSKHGEQYFRNLEFTCLQECINTADIIATGGGIIESEEVFNFLKNQKNIIWLDCNIDIIYSRINDDPHRPNANNKTIKQLNDLYCSRILRYNEIAFKKFDSHLLSISEIYYELLNLIKASDQY

Annotated regions:
phrase: RNLEFTCLQECINTADIIATGGGI
type: CONSERVED_SITE
name: Shikimate_kinase_CS
description: Shikimate kinase, conserved site