nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MKLYKKRGIIYIHSTFNNTISTLTDVFGNTIVWYSAGILGYKGPKKSTSLASQLISEKITISILKNNIKVVDIYIKGLGLGKETTLRIINNSGIFIRSITDITPIPHNGCRKKKKRRV

Annotated regions:
phrase: LRIINNSGIFIRSITDITPIPH
type: CONSERVED_SITE
name: Ribosomal_uS11_CS
description: Small ribosomal subunit protein uS11, conserved site
Protein sequence:
MAEKGEKGTRTVVLGVSGGIACYKAVELVRLLVREGFAVQVMMTRGAMEFVTPLTFQALSGRPVATEIFSLTQESEIGHINLADQADLLVIAPATANIIGKIASGVADDLLTTVLMATRAPVLIAPSMNVHMYENPILQENIRKLKRLGYHFMEPVEGYLACGYEGKGRLPEPQDIVEQIQGLLKKKDLAGERFLITAGPNHEPLDPVRYISNRSSGKMGYALARSGVRRGAEVTLVSGPTSLSPPAGVRLIPVQTAAEMRQAILQGYSGATAVLMAAAVADYHPEKFVAKKIKKGKGTLRLNLKPNPDILRELGMKKNGQILVGFAAETESLIANAKKKLREKNLDLIVANDVTKEGSGFDGDTNIATLLDRRGAVHPLPLMSKDELADRIYDYLIALKKRKEKE

Annotated regions:
phrase: TVVLGVSGGIACYKAVELVRLLVREGFAVQVMMTRGAMEFVTPLTFQALSGRPVATEIFSLTQESEIGHINLADQADLLVIAPATANIIGKIASGVADDLLTTVLMATRAPVLIAPSMNVHMYENPILQENIRKLKRLGYHFMEPVEGYLACGYEGKGRLPEPQDIVEQIQ
type: DOMAIN
name: Flavoprotein
description: Flavoprotein

phrase: LAGERFLITAGPNHEPLDPVRYISNRSSGKMGYALARSGVRRGAEVTLVSGPTSLSPPAGVRLIPVQTAAEMRQAILQGYSGATAVLMAAAVADYHPEKFVAKKIKKGKGTLRLNLKPNPDILRELGMKKNGQILVGFAAETESLIANAKKKLREKNLDLIVANDVTKEGSGFDGDTNIAT
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal
Protein sequence:
MKSMLLRDSVKKASQFQRSLHSDPNQAKILLEERRKLLEEANSSADENDSHSMATIKSHFERLKRDEQLLNGVLKKYDAKQEVLSPEELRDAQNFLEMQEANSLDNSIRGTNELLERAYATREDFDYQNSVLGNVTNRINGAAMSIPFINQILRKTSIRRRRDSIILALLISVLMLLFLFFH

Annotated regions:
Protein sequence:
MKIVFATNNQHKLQEIRDILGSKFEIVSLKEIGCDVDIPETGETLEENALQKAQYVYDHYHLSCFADDTGLEVEALDGAPGVHSARYAEGTDHDSEANMAKLLRELDGNENRKARFRTVICLIQKQDICPCGCTSIKKIHQFEGIVNGTIDTEKHGTEGFGYDPIFIPEGYDKSFAELGEEIKNSISHRARAVAKLAEFLNQKPAILNR

Annotated regions:
Protein sequence:
MICIGIEGTAEKTGMGIVDSSGEILASVGKSLIPASGGIHPREAAEHHAANIVPLIKDALQKSDLKLKDLDLVAFSRGPGLGPALRTVATAARSLSLALKVPIIGVNHCIGHVEIGRLTTGAQDPVTLYVSGGNSQVIAFDRGRYRVFGETLDIALGNCLDQFARSVNLGHPGGPQVEKLALQSDNYIKLPYTVKGMDLSFSGLLTAALRKYEAGEKLEDVCFSLQETAFSMVSEITERALAHAKKREVLLCGGVAANNRLREIVSIMAEEHYAEFYQPPIKYCGDNGAMIAWMGQLMFHYGLVQKMKDTSVIQRYRTDQVDVPWMKNSDNHLKLPIGMVEKGAEANIYPGEWMGHDALIKERIPKSYRVKEIDRRLRKKRTKSESKLLNTAKTCGVITPLIYDIDKKKKSIILEKIKGKTIKKVLDISEPPKIKLICEKIGENIARLHNCGIIHGDLTTSNMLLHGDEIVFIDFGLGKISELVEDKGVDLLVFKKALSGIHYNIAEKCFQFILEGYRGADGYDKIIKKIGEIESRSRYTSNDSL

Annotated regions:
phrase: MICIGIEGTAEKTGMGIVDSSGEILASVGKSLIPASGGIHPREAAEHHAANIVPLIKDALQKSDLKLKDLDLVAFSRGPGLGPALRTVATAARSLSLALKVPIIGVNHCIGHVEIGRLTTGAQDPVTLYVSGGNSQVIAFDRGRYRVFGETLDIALGNCLDQFARSVNLGHPGGPQVEKLALQSDNYIKLPYTVKGMDLSFSGLLTAALRKYEAGEKLEDVCFSLQETAFSMVSEITERALAHAKKREVLLCGGVAANNRLREIVSIMAEEHYAEFYQPPIKYCGDNGAMIAWMGQLMFHYGLVQKMKDTSVIQRYRTDQVDVP
type: DOMAIN
name: Gcp-like_dom
description: Gcp-like domain

phrase: KEIDRRLRKKRTKSESKLLNTAKTCGVITPLIYDIDKKKKSIILEKIKGKTIKKVLDISEPPKIKLICEKIGENIARLHNCGIIHGDLTTSNMLLHGDEIVFIDF
type: DOMAIN
name: RIO_dom
description: RIO-type domain

phrase: IIHGDLTTSNML
type: ACTIVE_SITE
name: Tyr_kinase_AS
description: Tyrosine-protein kinase, active site

phrase: RSLSLALKVPIIGVNHCIGH
type: CONSERVED_SITE
name: Peptidase_M22_CS
description: Peptidase M22, conserved site

phrase: KLPIGMVEKGAEANIYPGEWMGHDALIKERIPKSYRVKEIDRRLRKKRTKSESKLLNTAKTCGVITPLIYDIDKKKKSIILEKIKGKTIKKVLDISEPPKIKLICEKIGENIARLHNCGIIHGDLTTSNMLLHGDEIVFIDFGLGKISELVEDKGVDLLVFKKALSGIHYNIAEKCFQFILEGYRGADGYDKIIKKIGEIESRSRYTSNDS
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: KLPIGMVEKGAEANIYPGEWMGHDALIKERIPKSYRVKEIDRRLRKKRTKSESKLLNTAKTCGVITPLIYDIDKKKKSIILEKIKGKTIKKVLDISEPPKIKLICEKIGENIARLHNCGIIHGDLTTSNMLLHGDEIVFIDFGLGKISELVEDKGVDLLVFKKALSGIHYNIAEKCFQFILEGYRGADGYDKIIKKIGEIESRSRYTSNDS
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: GKSLIPASGGIHPREAAEHHAANIVPLIKDALQKSDLKLKDLDLVAFSRGPGLGPALRTVATAARSLSLALKVPIIGVNHCIGHVEIGRLTTGAQDPVTLYVSGGNSQVIAFDRGRYRVFGETLDIALGNCLDQFARSVNLGHPGGPQVEKLALQSDNYIKLPYTVKGMDLSFSGLLTAALRKYEAGEKLEDVCFSLQETAFSMVSEITERALAHAKKREVLLCGGVAANNRLREIVSIMAEEHYAEFYQPPIKYCGDNGAMIA
type: DOMAIN
name: Gcp-like_dom
description: Gcp-like domain
Protein sequence:
MSELVDLRSMTLDELKDFTSSLGEPAFRGTQIFDWIYKGKKSFREMSNLPEALRYELEDKAYLEKLNIRTVQKSKLDGTRKYLLELSDGNTIECVFMKYKFGNSICVSSQAGCRMGCRFCASTIKGLARNLSAGEMISQIMAVEEDTGEKIGHIVVMGSGEPFDNYENLSKFLKIVNEPKGLGIGMRNITVSTCGIVPMIIRFAEDFDQVNLAISLHASSDEDRSAIMPVNNRYNIAAVLAACGEYTEKTKRRITYEYTLVSGVNDSVQSARKLAGLLKGKLCHVNLIPLNEVKDNGFVTVRRSKAIEFQKVLENAGITTTIRRELGDDIDAACGQLRLNNE

Annotated regions:
phrase: YKFGNSICVSSQAGCRMGCRFCASTIKGLARNLSAGEMISQIMAVEEDTGEKIGHIVVMGSGEPFDNYENLSKFLKIVNEPKGLGIGMRNITVSTCGIVPMIIRFAEDFDQVNLAISLHASSDEDRSAIMPVNNRYNIAAVLAACGEYTEKTKRRITYEYTLVSGVNDSVQSARKLAGLLKGKLCHVNLIPLNEVKDNGFVTVRRSKAIEFQKVLENAGITTTIRRELGD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SSQAGCRMGCRFCASTIKGLARNLSAGEMISQIMAVEEDTGEKIGHIVVMGSGEPFDNYENLSKFLKIVNEPKGLGIGMRNITVSTCGIVPMIIRFAEDFDQVNLAISLHASSDEDRSAIMPVNNRYNIAAVLAACGEYTEKTKRRITYEYTLVSGVND
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VDLRSMTLDELKDFTSSLGEPAFRGTQIFDWIYKGKKSFREMSNLPEALRYELEDKA
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MFGDLFEEEYSTVSNNQYGKGKKLKTKALEPPAPREFTNLSGIRNQGGTCYLNSLLQTLHFTPEFREALFSLGPEELGLFEDKDKPDAKVRIIPLQLQRLFAQLLLLDQEAASTADLTDSFGWTSNEEMRQHDVQELNRILFSALETSLVGTSGHDLIYRLYHGTIVNQIVCKECKNVSERQEDFLDLTVAVKNVSGLEDALWNMYVEEEVFDCDNLYHCGTCDRLVKAAKSAKLRKLPPFLTVSLLRFNFDFVKCERYKETSCYTFPLRINLKPFCEQSELDDLEYIYDLFSVIIHKGGCYGGHYHVYIKDVDHLGNWQFQEEKSKPDVNLKDLQSEEEIDHPLMILKAILLEENNLIPVDQLGQKLLKKIGISWNKKYRKQHGPLRKFLQLHSQIFLLSSDESTVRLLKNSSLQAESDFQRNDQQIFKMLPPESPGLNNSISCPHWFDINDSKVQPIREKDIEQQFQGKESAYMLFYRKSQLQRPPEARANPRYGVPCHLLNEMDAANIELQTKRAECDSANNTFELHLHLGPQYHFFNGALHPVVSQTESVWDLTFDKRKTLGDLRQSIFQLLEFWEGDMVLSVAKLVPAGLHIYQSLGGDELTLCETEIADGEDIFVWNGVEVGGVHIQTGIDCEPLLLNVLHLDTSSDGEKCCQVIESPHVFPANAEVGTVLTALAIPAGVIFINSAGCPGGEGWTAIPKEDMRKTFREQGLRNGSSILIQDSHDDNSLLTKEEKWVTSMNEIDWLHVKNLCQLESEEKQVKISATVNTMVFDIRIKAIKELKLMKELADNSCLRPIDRNGKLLCPVPDSYTLKEAELKMGSSLGLCLGKAPSSSQLFLFFAMGSDVQPGTEMEIVVEETISVRDCLKLMLKKSGLQGDAWHLRKMDWCYEAGEPLCEEDATLKELLICSGDTLLLIEGQLPPLGFLKVPIWWYQLQGPSGHWESHQDQTNCTSSWGRVWRATSSQGASGNEPAQVSLLYLGDIEISEDATLAELKSQAMTLPPFLEFGVPSPAHLRAWTVERKRPGRLLRTDRQPLREYKLGRRIEICLEPLQKGENLGPQDVLLRTQVRIPGERTYAPALDLVWNAAQGGTAGSLRQRVADFYRLPVEKIEIAKYFPEKFEWLPISSWNQQITKRKKKKKQDYLQGAPYYLKDGDTIGVKNLLIDDDDDFSTIRDDTGKEKQKQRALGRRKSQEALHEQSSYILSSAETPARPRAPETSLSIHVGSFR

Annotated regions:
phrase: SGIRNQGGTCYLNSLLQTLHFTPEFREALFSLGPEELGLFEDKDKPDAKVRIIPLQLQRLFAQLLLLDQEAASTADLTDSFGWTSNEEMRQHDVQELNRILFSALETSLVGTSGHDLIYRLYHGTIVNQIVCKECKNVSERQEDFLDLTVAVKNVSGLEDALWNMYVEEEVFDCDNLYHCGTCDRLVKAAKSAKLRKLPPFLTVSLLRFNFDFVKCERYKETSCYTFPLRINLKPFCEQSELDDLEYIYDLFSVIIHKGGCYGGHYHVYIKDVDHLGNWQFQEEKSKPDVNLKDLQSEEEIDHPLMILKAILLEENNLIPVDQLGQKLLKKIGISWNKKYRKQHGPLRKFLQLHSQIFLLSSDESTVRLLKNSSLQAESDFQRNDQQIFKMLPPESPGLNNSISCPHWFDINDSKVQPIREKDIEQQFQGKESAYMLFYRK
type: DOMAIN
name: USP_dom
description: Ubiquitin specific protease domain

phrase: GIRNQGGTCYLNSLLQTLHFTPEFREALFSLGPEELGLFEDKDKPDAKVRIIPLQLQRLFAQLLLLDQEAASTADLTDSFGWTSNEEMRQHDVQELNRILFSALETSLVGTSGHDLIYRLYHGTIVNQIVCKECKNVSERQEDFLDLTVAVKNVSGLEDALWNMYVEEEVFDCDNLYHCGTCDRLVKAAKSAKLRKLPPFLTVSLLRFNFDFVKCERYKETSCYTFPLRINLKPFCEQSELDDLEYIYDLFSVIIHKGGCYGGHYHVYIKDVDHLGNWQFQEE
type: DOMAIN
name: Peptidase_C19_UCH
description: Peptidase C19, ubiquitin carboxyl-terminal hydrolase

phrase: GIRNQGGTCYLNSLL
type: CONSERVED_SITE
name: USP_CS
description: Ubiquitin specific protease, conserved site

phrase: YDLFSVIIHKGGCYGGH
type: CONSERVED_SITE
name: USP_CS
description: Ubiquitin specific protease, conserved site
Protein sequence:
MTEAKKSLKRTLIGKVVSDKRAKTVTVMVERRVKHPIYDKIMIKSSKYHAHDEQGEYKLGDVVEITESRPLSKTKNWVATRLVQKAALV

Annotated regions:
phrase: GDVVEITESRPL
type: CONSERVED_SITE
name: Ribosomal_uS17_CS
description: Small ribosomal subunit protein uS17, conserved site
Protein sequence:
MSSSTVADLIVATLKGAGVKRIFGVVGDSLNGITDALRRDGTIEWLHMRHEEAAAFAASGEAQVTGTLAVCAGSCGPGNLHLINGLYDAQRTRVPVLAIAAHIPSAEIGSNYFQATHPEILFKECSHYCELVSSAEQMPRMLDTAIRAAVGHRGVSVLVIPGDVAMLKTDAKPTPAAALLPPPSAVTPRAAELDALAAMLNGGKRVTLFCGRGCAGAHGPLMRLAEALKSPIVHALGGKEHVEWDNPYDVGMTGLIGFSSGYHAMMGCDVLLMLGTDFPYRQFFPTDALIAQVDLLPENLGRRCKLDLGLVGDVASTVEALLPRLDAKADRAHLDKSLADYAKAREGLDELATGEAGHEPIHPQYVAKLVSEIASDDAVFTFDVGTPTVWAARYLAMNGRRRMLGSLAHGSMANALPMAIGAQAVDRGRQVVSISGDGGFAMMMGEFMSLVQLKLPVKLVIIDNGTLGFVELEMKSSGLLAFGVELQNPDFAAVAKAMGVHAARVEDPADLRGALEAAFAHPGPALVDVVTNRQELAMPPKITLTEAAGFSLWVAKAVLNGRGDEVLDLARTNSLSGFFR

Annotated regions:
phrase: PIHPQYVAKLVSEIASDDAVFTFDVGTPTVWAARYLAMNGRRRMLGSLAHGSMANALPMAIGAQAVDRGRQVVSISGDGGFAMMMGEFMSLVQLKLPVKLVIIDNGTLGFVELEMKSSGLLAFGVELQNPDFAAVAKAMGVHAARVEDPADLRGALEAAFAHPGPALVDVVTNRQEL
type: DOMAIN
name: TPP_POXB-like
description: Pyruvate oxidase POXB-like, PP-binding domain

phrase: DVGTPTVWAARYLAMNGRRRMLGSLAHGSMANALPMAIGAQAVDRGRQVVSISGDGGFAMMMGEFMSLVQLKLPVKLVIIDNGTLGFVELEMKSSGLLAFGVELQNPDFAAVAKAMGVHAARVEDPADLRGALEAAFAHPGPALVD
type: DOMAIN
name: TPP_enzyme_TPP-bd
description: Thiamine pyrophosphate enzyme, TPP-binding

phrase: TVADLIVATLKGAGVKRIFGVVGDSLNGITDALRRDGTIEWLHMRHEEAAAFAASGEAQVTGTLAVCAGSCGPGNLHLINGLYDAQRTRVPVLAIAAHIPSAEIGSNYFQ
type: DOMAIN
name: Thiamin_PyroP_enz_TPP-bd_dom
description: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain

phrase: TVADLIVATLKGAGVKRIFGVVGDSLNGITDALRRDGTIEWLHMRHEEAAAFAASGEAQVTGTLAVCAGSCGPGNLHLINGLYDAQRTRVPVLAIAAHIPSAEIGSNYFQATHPEILFKECSHYCELVSSAEQMPRMLDTAIRAAVGHRGVSVLVIPGDV
type: DOMAIN
name: TPP_PYR_POXB-like
description: Pyruvate oxidase POXB-like, pyrimidine-binding domain

phrase: DALAAMLNGGKRVTLFCGRGCAGAHGPLMRLAEALKSPIVHALGGKEHVEWDNPYDVGMTGLIGFSSGYHAMMGCDVLLMLGTDFPYRQFFPTDALIAQVDLLPENLGRRCKLDLGLVGDVASTVEA
type: DOMAIN
name: Thiamin_PyroP_enz_cen_dom
description: Thiamine pyrophosphate enzyme, central domain
Protein sequence:
MSTDIDNDVRTRWNVTALSAGHQIAMHSALLDMDLLLCGETGTGKDTLASRIHELSSRTGPFVGMNCAAIPESLAESQLFGVVNGAFTGVCRAREGYIEPSNGGTLYLDEIDTMPLSLQAKLLRVLESRGVERLGSTDFIPLDLQVIASASAPLDELVEQGLFRRDLFFRLNVLTLQLPALRKRREQILPLFDQFTQDIAAECGRSAPTLDNGRVQILLSHDWPGNVRELKSAANAICPRIAVAGRRAVEARDPVTGLRMQMRVIEKMLIQDALKRHRHNFDAVLEELELPRRTLYHRMKELGVASHIDLAAES

Annotated regions:
phrase: GYIEPSNGGTLYLDE
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_2
description: Sigma-54 interaction domain, ATP-binding site 2

phrase: LLLCGETGTGKDT
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_1
description: Sigma-54 interaction domain, ATP-binding site 1

phrase: LDMDLLLCGETGTGKDTLASRIHELSSRTGPFVGMNCAAIPESLAESQLFGVVNGAFTGVCRAREGYIEPSNGGTLYLDEIDTMPLSLQAKLLRVLESRGVERLGSTDFIPLDLQVIASASAPLDELVEQGLFRRDLFFRLNV
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: QIAMHSALLDMDLLLCGETGTGKDTLASRIHELSSRTGPFVGMNCAAIPESLAESQLFGVVNGAFTGVCRAREGYIEPSNGGTLYLDEIDTMPLSLQAKLLRVLESRGVERLGSTDFIPLDLQVIASASAPLDELVEQGLFRRDLFFRLNVLTLQLPALRKRREQILPLFDQFTQDIAAECGRSAPTLDNGRVQILLSHDWPGNVRELKSAANAIC
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: QIAMHSALLDMDLLLCGETGTGKDTLASRIHELSSRTGPFVGMNCAAIPESLAESQLFGVVNGAFTGVCRAREGYIEPSNGGTLYLDEIDTMPLSLQAKLLRVLESRGVERLGSTDFIPLDLQVIASASAPLDELVEQGLFRRDLFFRLNVLT
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: MRVIEKMLIQDALKRHRHNFDAVLEELELPRRTLYHRMKE
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type
Protein sequence:
MNRDQSDLHIDELLADPFGGNIEIPGSEAVKAEKEQVRLVDVLPEENKEKAIQLAGQIDHKNMQSIVLYGSQAQSKLLNFSHDMINHVQKKDVGEIGEILGELMKKLEQVNPDDLQSKKKGFLARMFGRVSSSLQEVLSKYQKTSVQIDRISLKLEHSKNALISDNKLLEQLYEKNKEYFAALNVYIAAGELKLEELKTKTIPELKQQAESSDHNQMAVQEVNDLIQFADRLDKRVHDLLLSRQITIQSAPQIRLIQNTNQALAEKIQSSIVTAIPLWKNQVAIALTLLRQRNAVDAQQKVSDTTNELLLKNAELLKTNTIETARANERGLVDIDTLKKVQESLISTLEETLTIQEEGRIKRRQAEEELMMMEGDLKQKLITIKER

Annotated regions:
Protein sequence:
MDCTRLVQPLSAGTEFEIKVTKTTPLPRFAAIVVAAGKGLRAGGDIPKQFATWRGIPLVRHSVETFLSIGAAEVLVAIPPASEDIAQSSLSGLSGYRLVTGGKTRQESVCNALQALADNSCERVLIHDAARPDIPDDVISGLLDMIDIYQGAIPVLPVVDSIAVAENGIMTAKADRDMLRRVQTPQAFRFDEILTAHRAWKGAKDAGDDAQVLMANGGTVGLVDGDERLKKITFAEDLVSKTPAMRVGQGFDVHRLVKGEELWLCGVQIPHDKGLAGHSDADVALHCVVDALLGAIGDGDIGTHFPPSDPKWKGAPSPQFVEHAVKLVENAGFHIGNVDLTIICEEPKIGTHREGMRARLAELLRVDVTQVSVKATTTERLGFTGRGEGIAAQAIASLQRD

Annotated regions:
phrase: MRVGQGFDVHRLVKGEELWLCGVQIPHDKGLAGHSDADVALHCVVDALLGAIGDGDIGTHFPPSDPKWKGAPSPQFVEHAVKLVENAGFHIGNVDLTIICEEPKIGTHREGMRARLAELLRVDVTQVSVKATTTERLGFTGRGEGIAAQAIASLQ
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: AEDLVSKTPAMRVGQGFDVHRLVKGEELWLCGVQIPHDKGLAGHSDADVALHCVVDALLGAIGDGDIGTHFPPSDPKWKGAPSPQFVEHAVKLVENAGFHIGNVDLTIICEEPKIGTHREGMRARLAELLRVDVTQVSVKATTTERLGFTGRGEGIAAQAIASLQ
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: VLIHDAA
type: CONSERVED_SITE
name: ISPD_synthase_CS
description: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site

phrase: MRVGQGFDVHRLVKGEELWLCGVQIPHDKGLAGHSDADVALHCVVDALLGAIGDGDIGTHFPPSDPKWKGAPSPQFVEHAVKLVENAGFHIGNVDLTIICEEPKIGTHREGMRARLAELLRVDVTQVSVKATTTERLGFTGRGEGIAAQAIAS
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RVGQGFDVHRLVKGEELWLCGVQIPHDKGLAGHSDADVALHCVVDALLGAIGDGDIGTHFPPSDPKWKGAPSPQFVEHAVKLVENAGFHIGNVDLTIICEEPKIGTHREGMRARLAELLRVDVTQVSVKATTTERLGFTGRGEGIAAQAIASL
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: SDADVALHCVVDALL
type: CONSERVED_SITE
name: MECDP_synthase_CS
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site

phrase: RVGQGFDVHRLVKGEELWLCGVQIPHDKGLAGHSDADVALHCVVDALLGAIGDGDIGTHFPPSDPKWKGAPSPQFVEHAVKLVENAGFHIGNVDLTIICEEPKIGTHREGMRARLAELLRVDVTQVSVKATTTERLGFTGRGEGIAAQAIAS
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Protein sequence:
MTKRMLIDASHPEETRVAVLDGNRLEAFDIESANRLPLKGNIYLARVVRVEPSLQAAFVEYGGNRHGFLAFGEIHPDYYQIPVADRQRLLEMQRAEAEEDRRREEAEDAARANDAALNDALESAAAEPPAETGEAFPGAEDAAPPAPDAEGAAEEAAEARIVTIEAAAAEATVPHEGVALPPEGVPSAAPEHAADAAPEGEDRLPGEAAQDIAAAEAAEAESEGYAEAGGEGAEADAEPALPPETVGGSTEDDVRERRIPPKFLRHYKIQEVIKRRQIMLVQVVKEERGTKGAALTTYISLAGRFSVLMPNSPRGGGVSRKITSAADRKRLREVIDDLSLPDGMSLIVRTAGAQRPKPEIKRDCEYLLRLWDNIRERTFASTAPALIYEEADLIKRSIRDTFGKDVDEVVVDGDDAYNDAREFMRMLMPQHAQKVRISRDPVPLFAKHGVDQQLEQMHSPTVQLKSGGYIVINQTEALVAIDVNSGRATRDRHIEDTALRTNLEAADEVARQLRLRDLAGLIVIDFIDMESSKHDGMVERRLKEALKQDRARIQVGRISHFGLLEMSRQRLRPSLVEHAFIACPHCQGRGLVRSVESSGLAVLRAIEEEGGRRRAAEIVVHCATPVAFWLLNKKRERLMEDEQRFGMSILVQADDSLAGPGVRIERTRAQSPDAVAERPAALRMDYAPEPEEPEAVEAEPEIAEGRPEPEARAEAEGEGAANRGRRRRRRRRGGRREGADAAPGEAAAEEGEEEEDAEEGEAIAAPEA

Annotated regions:
phrase: SLAGRFSVLMPNSPRGGGVSRKITSAADRKRLREVIDDLSLPDGMSLIVRTAGAQRPKPEIKRDCEYLLRLWDNIRERTFASTAPALIYEEADLIKRSIRDTFGKDVDEVVVDGDDAYNDAREFMRMLMPQHAQKVRISRDPVPLFAKHGVDQQLEQMHSPTVQLKSGGYIVINQTEALVAIDVNSGRATRDRHIEDTALRTNLEAADEVARQLRLRDLAGLIVIDFIDMESSKHDGMVERRLKEALKQDRARIQVGRISHFGLLEMSRQ
type: DOMAIN
name: RNA-bd_AU-1/RNase_E/G
description: RNA-binding protein AU-1/Ribonuclease E/G

phrase: CPHCQGRGLVRSVESSGLAVLRAIEEEGGRRRAAEIVVHCATPVAFWLLNKKRERLMEDEQRFGMSILVQADDSLAGPGVRIE
type: DOMAIN
name: RNase_E_G_thioredoxin-like
description: RNase E/G, thioredoxin-like domain
Protein sequence:
MTILNHTLGFPRVGLRRELKKAQESYWAGNSTREELLTVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPPRHQNKDGSVDIDTLFRIGRGRAPTGEPAAAAEMTKWFNTNYHYMVPEFVKGQQFKLTWTQLLEEVDEALALGHNVKPVLLGPVTYLWLGKVKGEQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQAWLDAYKPAYDALQGQVKLLLTTYFEGVTPNLDTITALPVQGLHVDLVHGKDDVAELHKRLPSDWLLSAGLINGRNVWRADLTEKYAQIKDIVGKRDLWVASSCSLLHSPIDLSVETRLDAEVKSWFAFALQKCHELALLRDALNSGDTAALAEWSAPIQARRHSTRVHNPAVEKRLAAITAQDSQRANVYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRTLRLDFKKGNLDANNYRTGIAEHIRQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPPIVIGDISRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEEFDYPNEIGPGVYDIHSPNVPSVEWIEALLKKAAKRIPAERLWVNPDCGLKTRGWPETRAALANMVQAAQNLRRG

Annotated regions:
phrase: NHTLGFPRVGLRRELKKAQESYWAGNSTREELLTVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPPRHQNKDGSVDIDTLFRIGRGRAPTGEPAAAAEMTKWFNTNYHYMVPEFVKGQQFKLTWTQLLEEVDEALALGHNVKPVLLGPVTYLWLGKVKGEQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQAWLDAYKPAYDALQGQVKLLLTTYFEGVTPNLDTITALPVQGLHVDLVHGKDDVAELHKRLPSDWLLSAGLINGRNVWRADLTEKYAQIKDI
type: DOMAIN
name: Cbl-indep_Met_Synth_N
description: Cobalamin-independent methionine synthase MetE, N-terminal

phrase: WPTTTIGSFPQTTEIRTLRLDFKKGNLDANNYRTGIAEHIRQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPPIVIGDISRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEEFDYPNEIGPGVYDIHSPNVPSVEWIEALLKKAAKRIPAERLWVNPDCGLKTRGWPETRAALANMVQAAQ
type: DOMAIN
name: Met_Synth_C/arc
description: Cobalamin-independent methionine synthase MetE, C-terminal/archaeal

phrase: PTTTIGSFPQTTEIRTLRLDFKKGNLDANNYRTGIAEHIRQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPPIVIGDISRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEEFDYPNEIGPGVYDIHSPNVPSVEWIEALLKKAAKRIPAERLWVNPDCGLKTRGWPETRAALANMVQAA
type: DOMAIN
name: Met_Synth_C/arc
description: Cobalamin-independent methionine synthase MetE, C-terminal/archaeal
Protein sequence:
MVQAKTWILTKHFDGFPKDSDFELKVEELPAPKDGEVLLEAVFLSVDPYMRPFSRVRMNEGDVMIGTQVAKVIQSNNPAFPVGSNVVGRCGWRSHTVCDGMDLIPIMPEWPQDVSLSLALGAIGMTGLTALYGIEEILGLQKGETLLVNCAAGAVGSVVGQIAKIKGCKVVGSAGTDAKVAFLKELGFDEAFNYKTVGSMEEALKKASPDGYDCFFENVGGLSSSVALQQMKNFGRIAVCGAISTYNDSTPQTGPFPHLTMIFKQLKMEGFMQSRWEHKNPESLKRLMGWLKEGKLQCREHITKGFEKMPAAFMGILRGKTSARLSSQSDVEHRRRTCV

Annotated regions:
phrase: KTWILTKHFDGFPKDSDFELKVEELPAPKDGEVLLEAVFLSVDPYMRPFSRVRMNEGDVMIGTQVAKVIQSNNPAFPVGSNVVGRCGWRSHTVCDGMDLI
type: DOMAIN
name: ADH_N_2
description: Oxidoreductase, N-terminal domain

phrase: AVGSVVGQIAKIKGCKVVGSAGTDAKVAFLKELGFDEAFNYKTVGSMEEALKKASPDGYDCFFENVGGLSSSVALQQMKNFGRIAVCGAISTYNDSTPQTGPFPHLTMIFKQLKMEGFMQSRWEHKNPESL
type: DOMAIN
name: ADH-like_C
description: Alcohol dehydrogenase-like, C-terminal

phrase: GFPKDSDFELKVEELPAPKDGEVLLEAVFLSVDPYMRPFSRVRMNEGDVMIGTQVAKVIQSNNPAFPVGSNVVGRCGWRSHTVCDGMDLIPIMPEWPQDVSLSLALGAIGMTGLTALYGIEEILGLQKGETLLVNCAAGAVGSVVGQIAKIKGCKVVGSAGTDAKVAFLKELGFDEAFNYKTVGSMEEALKKASPDGYDCFFENVGGLSSSVALQQMKNFGRIAVCGAISTYNDSTPQTGPFPHLTMIFKQLKMEGFMQSRWEHKNPESLKRLMGWLKEGKLQCREHITKGFEKMPAAFMGILRGK
type: DOMAIN
name: PKS_ER
description: Polyketide synthase, enoylreductase domain
Protein sequence:
MLEKILATKREEISQLQLPEKQYFPKKSLKASLQKTSLPLGLIAEIKQASPSKGVLCETISPTAIARVYEEGGASAISVLTDRTYFQGDTAYVAEVKKTVSLPVLRKDFILSPLQVEETACIGADAMLLIAGAMEAKQLHELYELAYSKGLECLVEVHSEEELESLLAVFTPEVIGINNRNLKTFQTSVSQTEQIAKMVPKEALLVSESGIHTPDDIARVKKAGANAVLIGEQLMRKDDKRQAIIDLFSESAINQ

Annotated regions:
phrase: LIAEIKQASPSKGVLCET
type: CONSERVED_SITE
name: Indole-3-GlycerolPSynthase_CS
description: Indole-3-glycerol phosphate synthase, conserved site

phrase: LKASLQKTSLPLGLIAEIKQASPSKGVLCETISPTAIARVYEEGGASAISVLTDRTYFQGDTAYVAEVKKTVSLPVLRKDFILSPLQVEETACIGADAMLLIAGAMEAKQLHELYELAYSKGLECLVEVHSEEELESLLAVFTPEVIGINNRNLKTFQTSVSQTEQIAKMVPKEALLVSESGIHTPDDIARVKKAGANAVLIGEQLMRKDDKRQAIID
type: DOMAIN
name: Indole-3-glycerol_P_synth_dom
description: Indole-3-glycerol phosphate synthase domain

phrase: KILATKREEISQLQLPEKQYFPKKSLKASLQKTSLPLGLIAEIKQASPSKGVLCETISPTAIARVYEEGGASAISVLTDRTYFQGDTAYVAEVKKTVSLPVLRKDFILSPLQVEETACIGADAMLLIAGAMEAKQLHELYELAYSKGLECLVEVHSEEELESLLAVFTPEVIGINNRNLKTFQTSVSQTEQIAKMVPKEALLVSESGIHTPDDIARVKKAGANAVLIGEQLMRKDDKRQAII
type: DOMAIN
name: Indole-3-glycerol_P_synth_dom
description: Indole-3-glycerol phosphate synthase domain

phrase: MLEKILATKREEISQLQLPEKQYFPKKSLKASLQKTSLPLGLIAEIKQASPSKGVLCETISPTAIARVYEEGGASAISVLTDRTYFQGDTAYVAEVKKTVSLPVLRKDFILSPLQVEETACIGADAMLLIAGAMEAKQLHELYELAYSKGLECLVEVHSEEELESLLAVFTPEVIGINNRNLKTFQTSVSQTEQIAKMVPKEALLVSESGIHTPDDIARVKKAGANAVLIGEQLMRKDDKRQAIIDLF
type: DOMAIN
name: Indole-3-glycerol_P_synth_dom
description: Indole-3-glycerol phosphate synthase domain
Protein sequence:
MSERNDRKVYVGKVVSDKMDKTITVLVETYKTHKLYGKRVKYSKKYKTHDENNSAKLGDIVKIQETRPLSATKRFRLVEIVEESVII

Annotated regions:
phrase: GDIVKIQETRPL
type: CONSERVED_SITE
name: Ribosomal_uS17_CS
description: Small ribosomal subunit protein uS17, conserved site
Protein sequence:
MERKVHIIPYQVIKQEQQVNEIPRGVEMIQAPAVWNQTRGRGVKVAVLDTGCDADHPDLKARIIGGRNFTDDDEGDPEIFKDYNGHGTHVAGTIAATENENGVVGVAPEADLLIIKVLNKQGSGQYDWIIQGIYYAIEQKVDIISMSLGGPEDVPELHEAVKKAVASQILVMCAAGNEGDGDDRTDELGYPGCYNEVISVGAINFDRHASEFSNSNNEVDLVAPGEDILSTVPGGKYATFSGTSMATPHVAGALALIKQLANASFERDLTEPELYAQLIKRTIPLGNSPKMEGNGLLYLTAVEELSRIFDTQRVAGILSTASLKVK

Annotated regions:
phrase: GTSMATPHVA
type: ACTIVE_SITE
name: Peptidase_S8_Ser-AS
description: Peptidase S8, subtilisin, Ser-active site

phrase: GRGVKVAVLDTGCDADHPDLKARIIGGRNFTDDDEGDPEIFKDYNGHGTHVAGTIAATENENGVVGVAPEADLLIIKVLNKQGSGQYDWIIQGIYYAIEQKVDIISMSLGGPEDVPELHEAVKKAVASQILVMCAAGNEGDGDDRTDELGYPGCYNEVISVGAINFDRHASEFSNSNNEVDLVAPGEDILSTVPGGKYATFSGTSMATPHVAGALALIKQLANASFERDLTEPELYAQLIKRTIPLGNSPK
type: DOMAIN
name: Peptidase_S8/S53_dom
description: Peptidase S8/S53 domain

phrase: GVKVAVLDTGCDADHPDLKARIIGGRNFTDDDEGDPEIFKDYNGHGTHVAGTIAATENENGVVGVAPEADLLIIKVLNKQGSGQYDWIIQGIYYAIEQKVDIISMSLGGPEDVPELHEAVKKAVASQILVMCAAGNEGDGDDRTDELGYPGCYNEVISVGAINFDRHASEFSNSNNEVDLVAPGEDILSTVPGGKYATFSGTSMATPHVAGALALIKQLANASFERDLTEPELYAQLI
type: DOMAIN
name: Subtilisin_Carlsberg-like
description: Subtilisin Carlsberg-like catalytic domain

phrase: HGTHVAGTIA
type: ACTIVE_SITE
name: Peptidase_S8_His-AS
description: Peptidase S8, subtilisin, His-active site

phrase: VAVLDTGCDAD
type: ACTIVE_SITE
name: Peptidase_S8_Asp-AS
description: Peptidase S8, subtilisin, Asp-active site
Protein sequence:
MAKWGQGDPRWIVEEREDGTNVNNWHWTERDATSWSKGRLRELLVGITVENEAGRCEISELKQVEGEASCSSRKGKLIFFYEWNIKLGWKGIIRESGAKHKGLIEIPSLSEENEVDDTEVNVSKKKGDGDILKDLMKTAGTAKVREALGDYLKALKTEFTMGMILPTKAMAAQELTVERKLSENALQIQASSRVALGVRIPTVALHMTELFDTAIEQLYRIFTVKDLVQKFSKSPAVLEAEKGGKFQMLMETSPVNIQNC

Annotated regions:
phrase: MAKWGQGDPRWIVEEREDGTNVNNWHWTERDATSWSKGRLRELLVGITVENEAGRCEISELKQVEGEASCSSRKGKLIFFYEWNIKLGWKGIIRESGAKHKGLIEIPSLSEENEVDDTEVNVSKKKGDGDILKDLMKTAGTAKVREALGDYLKALKTEFTMGM
type: DOMAIN
name: AHSA1-like_N
description: Activator of Hsp90 ATPase AHSA1-like, N-terminal

phrase: ERDATSWSKGRLRELLVGITVENEAGRCEISELKQVEGEASCSSRKGKLIFFYEWNIKLGWKGIIRESGAKHKGLIEIPSLSEENEVDDTEVNVSKKKGDGDILKDLMKTAGTAKVREALGDYLKALKTEFTMG
type: DOMAIN
name: AHSA1-like_N
description: Activator of Hsp90 ATPase AHSA1-like, N-terminal

phrase: ERDATSWSKGRLRELLVGITVENEAGRCEISELKQVEGEASCSSRKGKLIFFYEWNIKLGWKGIIRESGAKHKGLIEIPSLSEENEVDDTEVNVSKKKGDGDILKDLMKTAGTAKVREALGDYLKALKT
type: DOMAIN
name: AHSA1-like_N
description: Activator of Hsp90 ATPase AHSA1-like, N-terminal
Protein sequence:
MHPRRPEGFDGLGYRGGVRDDPAFGGPFHARSFGSGTELGHWVTTPPDIPGSRNLHWGEKSPSYGVPSAPPTLEGSAEEPFPGGGEGPRPGPSSEQLNRFAGFGIGLASLFTENVLAHPCIVLRRQCQVNYHARHYHLTPFSIINIMYSFNKTQGPRALWKGMGSTFIVQGVTLGAEGIISEFTPLPREVSHKLNPKQIGEHLLLKCLTYMVAMPFYSASLIETVQSEIIRDNTGILECVKEGIGRVIGLGVPHSKRLLPLFSLIFPTVLHGVLHYIISSIIQKIVLLILKRKTYNSHLAESTSPMQNMLDAYFPELIANFAASLCSDVILYPLETVLHRLHIQGTRTIIDNTDLGYEVLPINTQYEGMRDCINTIKQEEGVFGFYKGFGAVIIQYTLHATILQITKMIYSTLLQNSI

Annotated regions:
phrase: DAYFPELIANFAASLCSDVILYPLETVLHRLHIQGTRTIIDNTDLGYEVLPINTQYEGMRDCINTIKQEEGVFGFYKGFGAVIIQYTLHATILQITKMIYST
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier

phrase: ELIANFAASLCSDVILYPLETVLHRLHIQGTRTIIDNTDLGYEVLPINTQYEGMRDCINTIKQEEGVFGFYKGFGAVIIQYTLHATILQITKMIYSTLL
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier

phrase: FAGFGIGLASLFTENVLAHPCIVLRRQCQVNYHARHYHLTPFSIINIMYSFNKTQGPRALWKGMGSTFIVQG
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier