nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MFPLKDAEMGAFTFFASALPHDVCGSNGLPLTPNSIKILGRFQILKTITHPRLCQYVDISRGKHERLVVVAEHCERSLEDLLRERKPVSHSTVLCIAYEVLEGLHYLNKHGIVHRALSPHNILLDRKGHIKLAKFGLYHMTAHGDDVDFPIGYPSYLAPEVIAQGIPKTTDHVPSEKPLPSGPKSDVWSLGIILFELCVGRKLFQSLDVSERVKFLLTLGCVDDTIIVLAEEHGCLDIIKELPENVINILKKCLTFHPSKRPTPDELMKDQVFSEVSPLYTPFIKPASLFSSSLRCADLTLPEDISDLCKDIDNDYLAERSIEEVYYLWCLAGGDLEKELINKEIIRSKPPVCTLPNFLFEDGESFGQGRDRSSLLDDTTVTLSLCQLRNRLKDVGGEAFYPLLEDDQSNLPHSNSNNELSAAATLPLIIRERDTEYQLNRIILFDRLLKAYPYKKNQIWKEARVDIPPLMRGLTWAALLGVEGAIHAKYDAIDKDTPIPTDRQIEVDIPRCHQYDELLSSPEGHAKFRRVLKAWVVSHPDLVYWQGLDSLCAPFLYLNFNNEALAYACMSAFIPKYLYNFFLKDNSHVIQEYLTVFSQMIAFHDPELSNHLNEIGFIPDLYAIPWFLTMFTHVFPLHKIFHLWDTLLLGNSSFPFCIGVAILQQLRDRLLANGFNECILLFSDLPEIDIERCVRESVNLFCWTPKSATYRQHAQPPKPASESSVVRSSAPYFSAECTDPPKTDLGNKASPVWKMHCAAPRA

Annotated regions:
phrase: MFPLKDAEMGAFTFFASALPHDVCGSNGLPLTPNSIKILGRFQILKTITHPRLCQYVDISRGKHERLVVVAEHCERSLEDLLRERKPVSHSTVLCIAYEVLEGLHYLNKHGIVHRALSPHNILLDRKGHIKLAKFGLYHMTAHGDDVDFPIGYPSYLAPEVIAQGIPKTTDHVPSEKPLPSGPKSDVWSLGIILFELCVGRKLFQSLDVSERVKFLLTLGCVDDTIIVLAEEHGCLDIIKELPENVINILKKCLTFHPSKRPTPDELMKDQV
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: DIPPLMRGLTWAALLGVEGAIHAKYDAIDKDTPIPTDRQIEVDIPRCHQYDELLSSPEGHAKFRRVLKAWVVSHPDLVYWQGLDSLCAPFLYLNFNNEALAYACMSAFIPKYLYNFFLKDNSHVIQEYLTVFSQMIAFHDPELSNHLNEIGFIPDLYAIPWFLTMFTHVFPLHKIFHLWDTLLLG
type: DOMAIN
name: Rab-GAP-TBC_dom
description: Rab-GAP-TBC domain

phrase: ARVDIPPLMRGLTWAALLGVEGAIHAKYDAIDKDTPIPTDRQIEVDIPRCHQYDELLSSPEGHAKFRRVLKAWVVSHPDLVYWQGLDSLCAPFLYLNFNNEALAYACMSAFIPKYLYNFFLKDNSHVIQEYLTVFSQMIAFHDPELSNHLNEIGFIPDLYAIPWFLTMFTHVFPLHKIFHLWDTLLLGNSSFPFCIGVAILQQLRDRLLAN
type: DOMAIN
name: Rab-GAP-TBC_dom
description: Rab-GAP-TBC domain

phrase: MRGLTWAALLGVEGAIHAKYDAIDKDTPIPTDRQIEVDIPRCHQYDELLSSPEGHAKFRRVLKAWVVSHPDLVYWQGLDSLCAPFLYLNFNNEALAYACMSAFIPKYLYNFFLKDNSHVIQEYLTVFSQMIAFHDPELSNHLNEIGFIPDLYAIPWFLTMFTHVFPLHKIFHLWDTLLLGNSSFPFCIGVAILQQLRDRL
type: DOMAIN
name: Rab-GAP-TBC_dom
description: Rab-GAP-TBC domain

phrase: FQILKTITHPRLCQYVDISRGKHERLVVVAEHCERSLEDLLRERKPVSHSTVLCIAYEVLEGLHYLNKHGIVHRALSPHNILLDRKGHIKLAKFGLYHMTAHGDDVDFPIGYPSYLAPEVIAQGIPKTTDHVPSEKPLPSGPKSDVWSLGIILFELCVGRKLFQSLDVSERVKFLLTLGCVDDTIIVLAEEHGCLDIIKELPENVINILKKCLTFHPSKRPTPDELMKDQV
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain
Protein sequence:
MGVFSIANQHIRFAVKLACAIVLALFIGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYSGAIRYRGMLRIIGTFIGCIAALIIIISMIRAPLLMILVCCVWAGFCTWISSLVRIENSYAWGLSGYTALIIVITIQTEPLLTPQFALERCSEIVIGIGCAILADLLFSPRSIKQEVDRELDSLLVAQYQLMQLCIKHGDSEEVDNAWGDLVRRTAALEGMRSNLNMESSRWVRANRRLKALNTLSLTLITQSCETYLIQNTRPELITDTFRELFETPVETVQDVHRQLKRMRRVIVWTGERETPVTLYSWVGAATRYLLLKRGVISNTKISATEEEILQGEPVVKVESAERHHAMVNFWRTTLSCVLGTLFWLWTGWTSGNGAMVMIAVVTSLAMRLPNPRMVCIDFIYGTLAALPLGLLYFLVIIPNTQQSMLLLCLSLAVLGFFIGIEVQKRRLGSMGALASTINIIVLDNPMTFHFSQFLDSALGQIVGCMLAFIVILLVRDKSKDRTGRVLLNQFVSAAVSAMTTNAARRKENRLPALYQQLFLLMNKFPGDLPKFRLALTMIIAHQRLRDAPIPVNEDLSVFHRQLRRTADHVISAGNDDKRRRYFGQLLDELDIYQEKLRIWEAPPQVTEPVKRLTGMLHKYQNALTDS

Annotated regions:
Protein sequence:
MERGLHLGAAAASEDDLFLHKSLGASTAKRLEAAFRSTPPGMDLSLAPPPRERPASSSSSPLGCFEPADPEGAGLLLPPPGGGGGAGGGGGGGGGGGVSVPGLLVGSAGVGGDPNLSSLPAGAALCLKYGESAGRGSVAESSGGEQSPDDDSDGRCELVLRAGGADPRASPGAGGGGTKVVEGCSNAHLHGGAGLPPGGSTGSGGGGSGGGGGGGSSSKKSKEQKALRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQAQALEEMRRLVAYLNQGQAISAASLPSSAAAAAAAAALHPALGAYEQAAGYPFSAGLPPAASCPEKCALFNSVSSSLCKQCTEKP

Annotated regions:
phrase: NARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILMQAQALE
type: DOMAIN
name: bHLH_dom
description: Myc-type, basic helix-loop-helix (bHLH) domain

phrase: RLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYI
type: DOMAIN
name: bHLH_dom
description: Myc-type, basic helix-loop-helix (bHLH) domain

phrase: ALRLNINARERRRMHDLNDALDELRAVIPYAHSPSVRKLSKIATLLLAKNYILM
type: DOMAIN
name: bHLH_dom
description: Myc-type, basic helix-loop-helix (bHLH) domain
Protein sequence:
MVENQKKKKIEEIERCPECGSTNLIRDYEHGELVCGECGAVIEDSYIDQGPEWRAFDSEQNESRARAGSPMTFTIHDKGLSTDISWKNKDSYGRSIPTRNRAQLYRLRKWQKRIKVSNAAERNLSQALQELERMAFNLSIPNDVRETAAVIYRKAVKQNMIRGRSIEGVVAGALYAACRITNVPRTLGEIASVTRVKKKEIGRTYRIMSRYLKLNIMPSKAEDYISRFCSKLKLSMDTRNKALEILRDAENVGLTSGKGPTGVAAAAIYIASLITGERRTQRAVAEVAGVTEVTIRNRYKELTEKLKLNVEQ

Annotated regions:
phrase: RNLSQALQELERMAFNLSIPNDVRETAAVIYRKAVKQNMIRGRSIEGVVAGALYAACRITNVPRTLGEIASVTRVKKKEIGRTYRIM
type: DOMAIN
name: TFIIB_cyclin
description: Transcription factor TFIIB, cyclin-like domain

phrase: SKAEDYISRFCSKLKLSMDTRNKALEILRDAENVGLTSGKGPTGVAAAAIYIASLITGERRTQRAVAEVAGVTEVTIRNRYKELT
type: DOMAIN
name: TFIIB_cyclin
description: Transcription factor TFIIB, cyclin-like domain

phrase: RCPECGSTNLIRDYEHGELVCGECGAVIEDSYIDQGPEWRA
type: DOMAIN
name: Znf_TFIIB
description: Zinc finger, TFIIB-type

phrase: QELERMAFNLSIPNDVRETAAVIYRKAVKQNMIRGRSIEGVVAGALYAACRITNVPRTLGEIASVTRVKKKEIGRTYRIMS
type: DOMAIN
name: Cyclin-like_dom
description: Cyclin-like domain

phrase: DYISRFCSKLKLSMDTRNKALEILRDAENVGLTSGKGPTGVAAAAIYIASLITGERRTQRAVAEVAGVTEVTIRNRYKELT
type: DOMAIN
name: Cyclin-like_dom
description: Cyclin-like domain

phrase: EIERCPECGSTNLIRDYEHGELVCGECGAVI
type: DOMAIN
name: Znf_TFIIB
description: Zinc finger, TFIIB-type

phrase: GKGPTGVAAAAIYIA
type: CONSERVED_SITE
name: TFIIB_CS
description: Transcription factor TFIIB, conserved site

phrase: GRSIEGVVAGALYAA
type: CONSERVED_SITE
name: TFIIB_CS
description: Transcription factor TFIIB, conserved site
Protein sequence:
MARIAGINIPDHKHAVIALTAIYGIGRTRAKAICAATAIAEDAKIKELSEAQIDTLREEVAKYTVEGDLRREVSMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPIKK

Annotated regions:
phrase: RGLRHRRSLPLRG
type: CONSERVED_SITE
name: Ribosomal_uS13_CS
description: Small ribosomal subunit protein uS13, conserved site
Protein sequence:
MKSCEHELLKTRRGKSREVSSRFLSSPSASSSPNRRNSTSNSSRDDQNNNGVKGHLGLKKHDRMSDGTRVCFGLPNQSSIEVDTKENRMPSPWINDEDNVILPGRFSVDECALYRASSRRNSCSLLYESFNDETDSELSDVSCASSLSTNRSSWNHKPGIKVSSKYLHDLTAKPSKGNNKTKLRSQDDSQRTNSSKGIENRLQRNNSVSRYGSSMSQWALSPGRSLDTQAVTVPSSKLKPPRGKGVGKLINLGFDFFRSKNKSSPFTSPLKPKTCDTESAHQLKLMNNRLLQWRFVNARACDVNKNVASQEKNQLLCAWDTLIKLNNLVLQERIKLQKKNLEMKLNYVFLSQVKHLEAWEDMEIQHLSSLSIIRDSLHSVLSRLPLKEGAKVNLESAVSIIKNAEAVTDAIISTVDDYAPTMEGIVPLASQLAEVVVQEKLMLEKCHDLLRMISELEMQERSLKCCFLIQHKQTFDTNLLKH

Annotated regions:
Protein sequence:
METEKRDIRSLTKAQLRDFFVANGDKAFRGNQVYEWLWSKASHSFDDMTNVSKETRAMLENNFVINHIQVDTMQRSEDGTVKNAVRLHDGLIVESVLIPTETRTTACVSSQVGCSLDCNFCATARLKRMRNLEPGEIYDQVVAIDRESRLYYNRPLSNIVFMGMGEPLMNYNNVMKAIDMITSEEGLGMSPKRITVSTSGISKMIRKMADDEVKFKLAVSLHSAIEETRNRIMPFTKNFQLPELKEALLYWYQKTKSKVTYEYVVWKGINDDKASIDALVKFCKYVPCKVNLIEYNPIDDGEFQQAHDSAIDHYIKALEQNDIVVKVRRSRGKDIDAACGQLANKS

Annotated regions:
phrase: IRSLTKAQLRDFFVANGDKAFRGNQVYEWLWSKASHSFDDMTNVSKETRAMLENNFV
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: TETRTTACVSSQVGCSLDCNFCATARLKRMRNLEPGEIYDQVVAIDRESRLYYNRPLSNIVFMGMGEPLMNYNNVMKAIDMITSEEGLGMSPKRITVSTSGISKMIRKMADDEVKFKLAVSLHSAIEETRNRIMPFTKNFQLPELKEALLYWYQKTKSKVTYEYVVWKGINDDKASIDALVKFCKYVPCKVNLIEYNPIDDGEFQQAHDSAIDHYIKALEQNDIVVKVRRSRGK
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: ETEKRDIRSLTKAQLRDFFVANGDKAFRGNQVYEWLWSKASHSFDDMTNVSKETRAMLENNFVINHIQVDTMQRSEDGTVKNAVRLHDGLIVESVLIPTETRTTACVSSQVGCSLDCNFCATARLKRMRNLEPGEIYDQVVAIDRESRLYYNRPLSNIVFMGMGEPLMNYNNVMKAIDMITSEEGLGMSPKRITVSTSGISKMIRKMADDEVKFKLAVSLHSAIEETRNRIMPFTKNFQLPELKEALLYWYQKTKSKVTYEYVVWKGINDDKASIDALVKFCKYVPCKVNLIEYNPIDDGEFQQAHDSAIDHYIKALEQNDIVVKVRRSRGKDIDAACGQLAN
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SSQVGCSLDCNFCATARLKRMRNLEPGEIYDQVVAIDRESRLYYNRPLSNIVFMGMGEPLMNYNNVMKAIDMITSEEGLGMSPKRITVSTSGISKMIRKMADDEVKFKLAVSLHSAIEETRNRIMPFTKNFQLPELKEALLYWYQKTKSKVTYEYVVWKGINDD
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MSRKVFYISDGTAITAEVFGHAVLSQFPVEFEALTIPFVETTQKAEAVKAQINDCFITTGERPLVFHSIVKAEIRDIIYSSECIDYDFLNTFVAPLEDQLGVKAVPVTHRTHGKANHSYEARIDAINYAMENDDGQTLKHIDKADIVLLGVSRCGKTPSSLYLSMQFGIKAANYPFIEDDMDNLKLPEVLKKNKHKLFGLTIDPVRLHEIRQSRMENSRYSSLRQCRIEVKEVEMMYKRERIPFVNTTNHSVEEIATKILDVTGLERHMF

Annotated regions:
Protein sequence:
MIGRLRGTLAEKQPPHLILDVNGLGYELEVPMTTLYRLPSVGEPITLHTHLVVREDAQLLYGFIGKRDRDFFRELIRLNGVGPKLALALMSSLEVDELVRAVSAQDTSALTKVPGVGKKTAERLLVELKDRFKAWEVVPSMFALVPNQPDMPAGQVASAESDAVSALISLGYKPQEASKAVSAIKDKNLSSEDMIRRALKGMI

Annotated regions:
phrase: AESDAVSALISLGYKPQEASKAVSAIKDKNLSSEDMIRRALKG
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal

phrase: MIGRLRGTLAEKQPPHLILDVNGLGYELEVPMTTLYRLPSVGEPITLHTHLVVREDAQLLY
type: DOMAIN
name: DNA_helicase_Holl-junc_RuvA_I
description: DNA helicase, Holliday junction RuvA type, domain I, bacterial

phrase: RELIRLNGVGPKLALALMS
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: SALTKVPGVGKKTAERLLV
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: SAESDAVSALISLGYKPQEASKAVSAIKDKNLSSEDMIRRAL
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal
Protein sequence:
MVSVDPLATERWRSIRRLTDRDSAYKVPWFVPGPENFEALQNTKILVIGAGGLGCELLKNLALSGFRTIEVIDMDTIDVSNLNRQFLFRESDVGKSKAEVAAAFVQQRVVGCQVTAHNCRIEDKGQEFYRKFSIIICGLDSIPARRWINGMLCDLVLEMADGKPDENTIIPMIDGGTEGFKGNARVIYPKFTACIDCTLDLYPPQVNFPLCTIAHTPRLPEHCIEYIKVVVWPEEKPFEGVSLDADDPIHVEWVLERASLRAEKYNIRGVDRRLTSGVLKRIIPAVASTNAVIAASCALEALKLATNIAKPIDNYLNFTQIHGAYTSVVSMMKDDNCLTCSGGRLPFEVSPSSTLESLIIRLSERFHLKHPTLATSTRKLYCISSFMPQFEQESKENLHTSMKDLVSDGEEILVSDEALSRALTLRIQLI

Annotated regions:
phrase: GPENFEALQNTKILVIGAGGLGCELLKNLALSGFRTIEVIDMDTIDVSNLNRQFLFRESDVGKSKAEVAAAFVQQRVVGCQVTAHNCRIEDKGQEFYRKFSIIICGLDSIPARRWINGMLCDLVLEMADGKPDENTIIPMIDGGTEGFKGNARVIYPKFTACIDCTLDLYPPQVNFPLCTIAHTPRLPEHCIEYIKVVVWPEEKPFEGVSLDADDPIHVEWVLERASLRAEKYNIRGVDRRLTSGVLKRIIPAVASTNAVIAASCALEALKLATNIAKPIDNYLNFTQIHGAYTSVVSMMKDDNC
type: DOMAIN
name: ThiF_NAD_FAD-bd
description: THIF-type NAD/FAD binding fold

phrase: KILVIGAGGLGCELLKNLALSGFRTIEVIDMDTIDVSNLNRQFLFRESDVGKSKAEVAAAFVQQRVVGCQVTAHNCRIEDKGQEFYRKFSIIICGLDSIPARRWINGMLCDLVLEMADGKPDENTIIPMIDGGTEGFKGNARVIYPKFTACIDCTLDLYPPQVNFPLCTIAHTPRLPEHCIEYIKVVVWPEEKPFEGVSLDADDPIHVEWVLERASLRAEKYNIRGVDRRLTSGVLKRIIPAVASTNAVIAASCALEALKLATNIAKPIDNYLNFTQIHGAYTSVVSMMKDDNCLTC
type: DOMAIN
name: Uba3_N
description: NEDD8-activating enzyme E1 catalytic subunit, N-terminal domain

phrase: FEVSPSSTLESLIIRLSERFHLKHPTLATSTRKLYCISSFMPQFEQESKENLHTSMKDLVSDGEEILVSDEALSRALTLRIQL
type: DOMAIN
name: E2-binding
description: E2 binding

phrase: EVSPSSTLESLIIRLSERFHLKHPTLATSTRKLYCISSFMPQFEQESKENLHTSMKDLVSDGEEILVSDEALSRALTLRI
type: DOMAIN
name: E2-binding
description: E2 binding

phrase: PLCTIAHT
type: ACTIVE_SITE
name: UBQ-activ_enz_E1_Cys_AS
description: Ubiquitin-activating enzyme E1, Cys active site
Protein sequence:
MHTCCPPVTLEQDLHRKMHSWMLQTLAFAVTSLVLSCAETIDYYGEICDNACPCEEKDGILTVSCENRGIISLSEISPPRFPIYHLLLSGNLLNRLYPNEFVNYTGASILHLGSNVIQDIETGAFHGLRGLRRLHLNNNKLELLRDDTFLGLENLEYLQVDYNYISVIEPNAFGKLHLLQVLILNDNLLSSLPNNLFRFVPLTHLDLRGNRLKLLPYVGLLQHMDKVVELQLEENPWNCSCELISLKDWLDSISYSALVGDVVCETPFRLHGRDLDEVSKQELCPRRLISDYEMRPQTPLSTTGYLHTTPASVNSVATSSSAVYKPPLKPPKGTRQPNKPRVRPTSRQPSKDLGYSNYGPSIAYQTKSPVPLECPTACSCNLQISDLGLNVNCQERKIESIAELQPKPYNPKKMYLTENYIAVVRRTDFLEATGLDLLHLGNNRISMIQDRAFGDLTNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIREIQSGTFDPVPNLQLLFLNNNLLQAMPSGVFSGLTLLRLNLRSNHFTSLPVSGVLDQLKSLIQIDLHDNPWDCTCDIVGMKLWVEQLKVGVLVDEVICKAPKKFAETDMRSIKSELLCPDYSDVVVSTPTPSSIQVPARTSAVTPAVRLNSTGAPASLGAGGGASSVPLSVLILSLLLVFIMSVFVAAGLFVLVMKRRKKNQSDHTSTNNSDVSSFNMQYSVYGGGGGTGGHPHAHVHHRGPALPKVKTPAGHVYEYIPHPLGHMCKNPIYRSREGNSVEDYKDLHELKVTYSSNHHLQQQQQPPPPPQQPQQQPPPQLQLQPGEEERRESHHLRSPAYSVSTIEPREDLLSPVQDADRFYRGILEPDKHCSTTPAGNSLPEYPKFPCSPAAYTFSPNYDLRRPHQYLHPGAGDSRLREPVLYSPPSAVFVEPNRNEYLELKAKLNVEPDYLEVLEKQTTFSQF

Annotated regions:
phrase: TNLRRLYLNGNRIERLSPELFYGLQSLQYLFLQYNLIREIQSGTFDPVPNLQLLFLNNNL
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: RGLRRLHLNNNKLELLRDDTFLGLENLEYLQVDYNYISVIEPNAFGKLHLLQVLILNDNL
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: LTLLRLNLRSNHFTSLPVSGVLD
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: SILHLGSNVIQDIETGAFH
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: TGLDLLHLGNNRISMIQDRAFG
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LENLEYLQVDYNYISVIEPNAFG
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LHLLQVLILNDNLLSSLPNNLFR
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LTHLDLRGNRLKLLPYVGLLQ
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LRGLRRLHLNNNKLELLRDDTFL
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: VPNLQLLFLNNNLLQAMPSGVFS
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LTNLRRLYLNGNRIERLSPELFY
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LQSLQYLFLQYNLIREIQSGTFD
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: NLRRLYLNGNRIERLSPELFY
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: NPWNCSCELISLKDWLDSISYSALVGDVVCETPFRLHGRDLDEVSKQELC
type: DOMAIN
name: Cys-rich_flank_reg_C
description: Cysteine-rich flanking region, C-terminal

phrase: NPWDCTCDIVGMKLWVEQLKVGVLVDEVICKAPKKFAETDMRSIKSELLC
type: DOMAIN
name: Cys-rich_flank_reg_C
description: Cysteine-rich flanking region, C-terminal
Protein sequence:
MIGILAGMGPKSTSPFIDKVIDYCQKLYGASNDIDYPHMMIYSCPTPFYADRPIDHDEMKKAIIDGAVKLEKTGVDFIALPCNTAHVYYEEIQQALSVPMLHIVEETIKEIPHPAKKAVVLGTEPTIQSAIYQKVLKGNGQEVIHKDHWQQAVNQLIAAIKQPNHMQHTQALWQTLYEEISQHADIIISACTDLNAVLDHIQSEIPIIDSSACLAKSTVSTYLAYQS

Annotated regions:
phrase: IISACTDLNA
type: ACTIVE_SITE
name: Asp/Glu_racemase_AS_2
description: Asp/Glu racemase, active site 2

phrase: ALPCNTAH
type: ACTIVE_SITE
name: Asp/Glu_racemase_AS_1
description: Asp/Glu racemase, active site 1
Protein sequence:
MPPLLTQPEVLERRLKEIPPEPGCYLMRDGEDRILYVGKSKSLRSRVRSYFRSRHDLSPRIRLMTRQVCEIEFIVTDSEAEALALESNLIKNHQPHFNVLLKDDKKYPYLCITWSEAYPRIFITRRRRFRSPLDRFYGPYVDVGLLRRTLFLVKRVFPLRQRPRPLHPDRTCLNYSIGRCPGVCQEKITSEDYHRTLRKVAMVFQGRSDELQRLLDEQMNRYAERLDFESAARVRDQLQGLDQLTADQKMSLPDSSVSRDVLALACDDRLAAVQLFQMRAGKLVGRLGYTADASALAPGLILQRVIEEHYSQVDAVEVPPELLVQHALPQQQLLEDWLTEQRERKVQIHCPKQRQKADLIELVQRNAEFELLRAKQGQEQQALATEDLAQLLEMPTPPRRIEGYDISHIQGSDAVASQVVFIDGLPAKQHYRKYKIRSSSIQSGHSDDFMAMAEIMRRRFRRWARAKADGVDVGALRHKGGSALQTDGLNDWPDVVMIDGGKGQLSAVMEALRELDLHEDLNVCSLAKQREEVFLPGESQPLESEPDQLGVALLRRLRDEAHRFAVSFHRQQRGERMKRSRLSDIPGVGPKRVKDLLAHFHSIDAIQMASVDLLSKAPGVGTALARDIHGFFHPAEEAGQDECSEEPRAHTA

Annotated regions:
phrase: DELQRLLDEQMNRYAERLDFESAARVRDQLQGLDQ
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: SRLSDIPGVGPKRVKDLLA
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: DLLSKAPGVGTALARDIHG
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: QLLEMPTPPRRIEGYDISHIQGSDAVASQVVFIDGLPAKQHYRKYKIRSSSIQSGHSDDFMAMAEIMRRRFRRWARAKADGVDVGALRHKGGSALQTDGLNDWPDVVMIDGGKGQLSAVMEALRELDLHEDLNVCSLAKQREEVFLPGESQPLESEPDQLGVALLRRLRDEAHRFA
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: PEPGCYLMRDGEDRILYVGKSKSLRSRVRSYFRSRHDLSPRIRLMTRQVCEIEFIVTDSEAEALALESNLIKNHQPHFN
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: PGCYLMRDGEDRILYVGKSKSLRSRVRSYFRSRHDLSPRIRLMTRQVCEIEFIVTDSEAEALALESNLIKNHQP
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: IPPEPGCYLMRDGEDRILYVGKSKSLRSRVRSYFRSRHDLSPRIRLMTRQVCEIEFIVTDSEAEALALESNLIKNHQPHFN
type: DOMAIN
name: GIY-YIG_UvrC_Cho
description: UvrC/Cho-like, GIY-YIG domain

phrase: VLALACDDRLAAVQLFQMRAGKLVGRLGYTADASALAPGLILQRVIEEHYSQVDAVEVPPELLVQHALPQQQLLEDWLTEQRERKVQIHCPKQRQKADLIELVQRNAEFELLRAKQGQEQQALATEDLAQLLEMPTPPRRIEGYDISHIQGSDAVASQVVFIDGLPAKQHYRKYKIRSSSIQSGHSDDFMAMAEIMRRRFRRWARAKADGVDVGALRHKGGSALQTDGLNDWPDVVMIDGGKGQLSAVMEA
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: EPGCYLMRDGEDRILYVGKSKSLRSRVRSYFRSRHDLSPRIRLMTRQVCEIEFIVTDSEAEALALESNLIKNHQPHFNVLLK
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: ELQRLLDEQMNRYAERLDFESAARVRDQLQGLD
type: DOMAIN
name: UVR_dom
description: UVR domain
Protein sequence:
MFGFFKSPGNNKLPNESSNNKGGTITAGRRTSSEPILITPDFDDDDKYKNGFNDSGGLQSQTTEELEKYAVYKAEETTKGVNNCLKIAEDIRSDGARTLEMLHQQGEQINRTHEMAVDMDKDLSRGEKLLNNLGGMFSKPWKPKKTKNITGPMITPDKPSKKSENHKEEREKLGLGAKGRSSSQPALDQPTNALQKVEQEKAKQDDGLSDLSDILGDLKSMAVDMGSEIDKQNKALDHLGDDVDELNSRVQGANQRARHLLSK

Annotated regions:
phrase: EQEKAKQDDGLSDLSDILGDLKSMAVDMGSEIDKQNKALDHLGDDVDELNSRVQGANQRARH
type: DOMAIN
name: T_SNARE_dom
description: Target SNARE coiled-coil homology domain

phrase: KYAVYKAEETTKGVNNCLKIAEDIRSDGARTLEMLHQQGEQINRTHEMAVDMDKDLSRGEKLLN
type: DOMAIN
name: NPSN/SNAP25-like_N_SNARE
description: NPSN/SNAP25-like, N-terminal SNARE domain

phrase: ALQKVEQEKAKQDDGLSDLSDILGDLKSMAVDMGSEIDKQNKALDHLGDDVDELNSRVQGANQRARH
type: DOMAIN
name: T_SNARE_dom
description: Target SNARE coiled-coil homology domain

phrase: LEKYAVYKAEETTKGVNNCLKIAEDIRSDGARTLEMLHQQGEQINRTHEMAVDMDKDLSRGEKLLNN
type: DOMAIN
name: T_SNARE_dom
description: Target SNARE coiled-coil homology domain
Protein sequence:
MSSSPWEPAPLRRVFVVGVGMTKFVRPGAENSRDYPDLAGEAGQKALADAQIPYSAVDQACVGYVFGDSTCGQRAIYHSLGMTGIPIINVNNNCSTGSTALFMARQLIQGGVAECVLALGFEKMSKGSLGIKFSDRTIPTDKHLDVLINKYGLSAHPVAPQMFGYAGKEHMEKYDGAAAAILASEAFVQKYGLQSKAVEILAQEMMTDLPSSFEEKSVIKMVGFDMSKEAARKCYEKSGLTPNDIDVIELHDCFSTNELLTYEALGLCPEGQGATLVDRGDNTYGGKWVINPSGGLISKGHPLGATGLAQCAELCWQLRGEAGKRQVPGAKVALQHNLGLGGAVVVTLYKMGFPEAASSFRTHQIEAAPTNSASDGFKANLVFKEIEKKLEEEGEQFVKKIGGIFAFKVKDGPGGKEATWVVDVKNGKGSVLPNSDKKADCTITMADSDFLALMTGKMNPQSAFFQGKLKITGNMGLAMKLQNLQLQPGNAKL

Annotated regions:
phrase: FKEIEKKLEEEGEQFVKKIGGIFAFKVKDGPGGKEATWVVDVKNGKGSVLPNSDKKADCTITMADSDFLALMTGKMNPQSAFFQGKLKITGNMGLAMKLQN
type: DOMAIN
name: SCP2_sterol-bd_dom
description: SCP2 sterol-binding domain

phrase: FDMSKEAARKCYEKSGLTPNDIDVIELHDCFSTNELLTYEALGLCPEGQGATLVDRGDNTYGGKWVINPSGGLISKGHPLGATGLAQCAELCWQLRGEAGKRQVPGAKVALQHNLG
type: DOMAIN
name: Thiolase_C_2
description: Thiolase, C-terminal domain 2

phrase: VNNNCSTGSTALFMARQL
type: ACTIVE_SITE
name: Thiolase_acyl_enz_int_AS
description: Thiolase, acyl-enzyme intermediate active site

phrase: NPSGGLISKGHPLGAT
type: CONSERVED_SITE
name: Thiolase_CS
description: Thiolase, conserved site

phrase: VFVVGVGMTKFVRPGAENSRDYPDLAGEAGQKALADAQIPYSAVDQACVGYVFGDSTCGQRAIYHSLGMTGIPIINVNNNCSTGSTALFMARQLIQGGVAECVLALGFEKMSKGSLGIKFSDRTIPTDKHLDVLINKYGL
type: DOMAIN
name: Thiolase_N
description: Thiolase, N-terminal
Protein sequence:
MDSRGFDSEGREFSSATEMWAHEIGAAADAPVSAAVAEPAPAPAAGSNGVAGEQEAGGGGKREEWYSKAIAYWQGVEASTEGVLGGYGCVNDVDVKGSDAFLRPLLAERFGAARRHLVALDCGSGIGRVTKNFLLRHFNEVDLVEPVSHFLEAAQENLTECMEVGEDTHKAANFYCVPLQDFTPDEGRYDVIWIQWCIGQLPDDDFISFFNRAKIGLKPNGFFVLKENIARNGFVLDKEDNSITRSDAYFKELFKKCGLYIHSIKDQSDLPKELFAVKMYALVTEKPKIQKNGKRRRPKNSPRMIRS

Annotated regions:
Protein sequence:
MQIILLEKVTNLGNLGDVVRVKDGFARNFLIPQRKARRATEAAIADFAVRRAELEKLAAEKLAAAEAVGTKLKDLVLEIGQKAGVDGRLFGSVTNHDIADALKAKGFTIEKSSVRMPTGPLKMVGDHPVAVAVHTDVVADITIRVVGEQA

Annotated regions:
phrase: GNLGDVVRVKDGFARNFLIPQRKARRA
type: DOMAIN
name: Ribosomal_bL9_N
description: Large ribosomal subunit protein bL9, N-terminal

phrase: AAAEAVGTKLKDLVLEIGQKAGVDGRLFGSVTNHDIADALKAKGFTIEKSSVRMPTGPLKMVGDHPVAVAVHTDVVADITIRV
type: DOMAIN
name: Ribosomal_bL9_C
description: Large ribosomal subunit protein bL9, C-terminal

phrase: MQIILLEKVTNLGNLGDVVRVKDGFARNFLIPQRKARRATEAAIAD
type: DOMAIN
name: Ribosomal_bL9_N
description: Large ribosomal subunit protein bL9, N-terminal
Protein sequence:
MKSNYAVIVAAGKGKRMKMPINKQFICIQGKPILYYSISVFSKNPLVDKIVLVCAEDEIEYCKQEIVKKYNFDKVVKIVSGGKERQHSVFNALKVLENCSVVLIHDGARPFVTDRIIEDGIKYSNMYGACACGVVPKDTIKIKGKEGFSYKTLVRKELFIVQTPQCFDYNLIYDCHKKLANNKVQVTDDTTVAEYFGNMVYLYEGSYDNIKITTPEDLIIAENIFKTHKYI

Annotated regions:
phrase: VLIHDGA
type: CONSERVED_SITE
name: ISPD_synthase_CS
description: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site
Protein sequence:
MKYKDLRDFIQRLEALGELRRVTQPVSPVLEMTELCDRVLRAGGPALLFNAPPGNAFPVLGNLFGTPRRVALGMGVDAGDDAALGSLRDLGRLLSALKEPDPPKSLKDAGKLLSLAKAVWDMAPKSVSSPPCQEIVWEGADVDLNKLPIQTCWPGDAGPLVTWGLTVTRGPNKSRQNLGIYRQQLIGRNKLIMRWLAHRGGALDFREFALQNPGKPYPVAVVLGADPATTLGAVTPVPDSLSEYQFAGLLRGSRTELAKCLTPGVDTLQVPARAEIVLEGFIHPQEGAPAPAPAGAPPRPAGNAAAAYEHALEGPYGDHTGYYNEQEWFPVFTVERITMRRDAIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQFTEITDFYLPPEGCSYRMAIVQMKKSYAGHAKRVMFGVWSFLRQFMYTKFIVVVDEDVNIRDWKEVIWAITTRVDPVRDTVMVDSTPIDYLDFASPVAGLGSKMGLDATNKWPGETSREWGRPIEMDAAVKARVDRLWQEIGL

Annotated regions:
phrase: IQRLEALGELRRVTQPVSPVLEMTELCDRVLRAGGPALLFNAPPGNAFPVLGNLFGTPRRVALGMGVDA
type: DOMAIN
name: UbiD-like_N
description: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase-like, N-terminal domain

phrase: VLGVALNEVFVPLLQKQFTEITDFYLPPEGCSYRMAIVQMKKSYAGHAKRVMFGVWSFLRQFMYTKFIVVVDEDVNIRDWKEVIWAITTRVDPVRDTVMVDSTPIDYLDFASPVAGLGSKMGLD
type: DOMAIN
name: UbiD-like_C
description: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase-like, C-terminal domain

phrase: VSSPPCQEIVWEGADVDLNKLPIQTCWPGDAGPLVTWGLTVTRGPNKSRQNLGIYRQQLIGRNKLIMRWLAHRGGALDFREFALQNPGKPYPVAVVLGADPATTLGAVTPVPDSLSEYQFAGLLRGSRTELAKCLTPGVDTLQVPARAEIVLEGFIHPQEGAPAPAPAGAPPRPAGNAAAAYEHALEGPYGDHTGYYNEQEWFPVFTVERITMRRDAIYHSTYTGK
type: DOMAIN
name: UbiD_Rift_dom
description: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase-like, Rift-related domain
Protein sequence:
MRTPFIAGNWKMNKNPKETQEFLDGVKGKLPDASKVETVIGAPAIDLTTLVAGAEGTPLKTAAENCYFEDEGAFTGETSPKALKEMNVDYVIIGHSERRGYFHETDEDINKKAKAIFKNNLLPIICCGESLAQREAGQTEDWVASQIEAALAGLSADQVKVSVLAYEPIWAIGTGKTATADQAQEVVAHIRATVEKLYNKDTADAVRILYGGSVKPANVKELMAKPDIDGGLVGGASMDPESFIALANYQD

Annotated regions:
phrase: AYEPIWAIGT
type: ACTIVE_SITE
name: Triosephosphate_isomerase_AS
description: Triosephosphate isomerase, active site
Protein sequence:
MDSKLLLVTQSGSVDDLYSLIQAAPDILQKVDVLPIIHTPLHEASSAGKLDLAMELMILKPSFAKKLNEYGLSPLHLAVENDQVELALELVKVDPSLVRIRGRGGMTPLHLVAKKGDVDLLTDFLLACPESIKDVNVNGETILHITIMNDKYEQLKVLTGWMQKMRDSDDVFIDVLNRRDRGGNTVLHLAAYENNDKVVKQLVKCLSLDRNIQNKSGMTALDVLRARGSHMNKEIEEIIQMSGGKTGGSLSGIQEWYIFLREPVTFKEHCKTRIARYRSRISDGSRNALLVIAALIISATFQTAAQLLDKEKLDKVKKNGMRFSEFQLWGCNTVAFSIAILFSFILLPVGRAYEWWYFIITVPLVFSYFLLMYMMHGLSFFFLIIYEGGLFLVYLLVLYVKWKRCTQMKVRKPKSDLISDNFKNMV

Annotated regions:
phrase: GNTVLHLAAYENNDKVVKQLVKCLSLDRNIQN
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: QSGSVDDLYSLIQAAPDILQKVDVLPIIHTPLHEASSAGKLDLAMELMILKPSFAKKLNEYGLSPLHLAVENDQVELALELV
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: NGETILHITIMNDKYEQLKVLTGWMQKMRDSD
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: YGLSPLHLAVENDQVELALELVKVDPSLV
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: IIHTPLHEASSAGKLDLAMELMILKPSFA
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: GGNTVLHLAAYENNDKVVKQLVKCLSLDRN
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: GGMTPLHLVAKKGDVDLLTDFLLACPESIK
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: GGMTPLHLVAKKGDVDLLTDFL
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat
Protein sequence:
MALYETILIARQDITASQVEGLTETFTGILKENGGEVKKVEQWGLKTLTYRIKKNRKAHYVYIGHEAPAAAVAEMERNMSINEDVLRFMTVKVEKIEEGQTAMLTNKGERSERGPRGGFGDRGPRRDFGDRGPRRDFGDRGPRRDGDGPRAEGGRNEGEGDRA

Annotated regions:
Protein sequence:
MSRFAKVERKTKESDIVVELDLDGTGQVSIDTGVPFFDHMLTSLGTHASFDLTVKAVGDIEIEGHHTIEDTSIVLGQALAQALGDKKGIRRFGDAFIPMDECLAHAAVDVSGRPYFVHTGEPDYMVQFTIAGSAAPYHTVVNRHVFESLAYNARIALHVRTLYGRDPHHITEAEYKAVARALRQAVEYDPRVTGVPSTKGTL

Annotated regions:
phrase: GRDPHHITEAEY
type: CONSERVED_SITE
name: ImidazoleglycerP_deHydtase_CS
description: Imidazoleglycerol-phosphate dehydratase, conserved site
Protein sequence:
MGKYNLTALQVRKTAIDSIAAGKKGDLPRWVNVVGDIPPAQILVRERPQQHPLVRQRMKTIPGNPTPQPVFQVQTKRVKPKKASRMFLPVEIKYEEDQLRKEFFRDHPWELARPRILVESSGKDSERYNWSRMQQPGKKLDGESVVQRQLWLLNNVPDMTKSRAYDIARREFYRLRLQEDIERRVAVEEAEATGAVFGPSRLEIGMELENQQFEAWKSWAKTEAQIVDQASTSEDGSENQSLP

Annotated regions: