nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTTNLLNYDVKGLTDFCKEIGEKPFRAKQLLRWIHQFGMTDFVAMSDLAKGFREKLTALAVIESPQIISDHVAADGTRKWLLSVGAGNGIETVFIPEVSRGTLCVSSQVGCALACTFCSTGKQGFNRNLTVAEIIGQLWIANKTLKSDSSAAITDANRVVSNVVMMGMGEPLANFENVVMALDLMLDDHAYGLSRRRVTVSTSGLVPAMDRLRERCPVALAVSLHAPNDNLRDQLVPINKKYPIKELLAACQRYLAVAPRDFITFEYVMLDGVNDSIAHARELIKLVQDIPCKFNLIPFNSFPGSDFKRSPSEAVDIFRDILMQAGFVTTVRKTRGDDIAAACGQLAGQVKDKTRRTAAHVKMEAVK

Annotated regions:
phrase: EVSRGTLCVSSQVGCALACTFCSTGKQGFNRNLTVAEIIGQLWIANKTLKSDSSAAITDANRVVSNVVMMGMGEPLANFENVVMALDLMLDDHAYGLSRRRVTVSTSGLVPAMDRLRERCPVALAVSLHAPNDNLRDQLVPINKKYPIKELLAACQRYLAVAPRDFITFEYVMLDGVNDSIAHARELIKLVQDIPCKFNLIPFNSFPGSDFKRSPSEAVDIFRDILMQAGFVTTVRKTRGD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TNLLNYDVKGLTDFCKEIGEKPFRAKQLLRWIHQFGMTDFVAMSDLAKGFREKLTALAV
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: SSQVGCALACTFCSTGKQGFNRNLTVAEIIGQLWIANKTLKSDSSAAITDANRVVSNVVMMGMGEPLANFENVVMALDLMLDDHAYGLSRRRVTVSTSGLVPAMDRLRERCPVALAVSLHAPNDNLRDQLVPINKKYPIKELLAACQRYLAVAPRDFITFEYVMLDGVNDSIAH
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MLEINYDTKLLGVVGENISYTLSPAIHNYSFQELGINAVYLAFDIKSDEFKEIFPGLVKIAYGLNITIPYKEIAIKYVEAQSEAKRIGAINTIFNGKGYNTDYIAIKSLVQERIDKFETCTIFGAGGAARAAIFALHDLDCSINVINRSKEKAEKLIEEMRNKNIEIKITYNCKSDIIVNSTPNPDFVPDECVNGKLVIDFVYKPVITSLIKRAQNKNIKTINGIEILVRQAMEAEKIWFGKSLEDEEVVNYLYARKLIW

Annotated regions:
phrase: VVGENISYTLSPAIHNYSFQELGINAVYLAFDIKSDEFKEIFPGLVKIAYGLNITIPYKEIAIKYVEAQSEAKRIGAINT
type: DOMAIN
name: Shikimate_DH-bd_N
description: Shikimate dehydrogenase substrate binding, N-terminal

phrase: QERIDKFETCTIFGAGGAARAAIFALHDLDCSINVINRSKEKAEKLIEEMRNKNIEIKITYNCKSDIIVNSTPNP
type: DOMAIN
name: Shikm_DH/Glu-tRNA_Rdtase
description: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase
Protein sequence:
MRVMGTWMNWQNLWRGGTMILGMLMICSTAENLWVTVYYGVPVWKDAETTLFCASDAKAYDTEAHNVWATHACVPTDPNPQEIYLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVQLTPLCVTLNCNNITINNITTNITEDMRGEIKNCSYNMTTVLRDKRRKVYSLFYRLDIVPLDEGNNNSAGSSDYRLINCNTSTITQACPKVSFDPIPIHYCAPAGFAILKCKDPDFNGTGPCKNVSTVQCTHGIKPVVSTQLLLNGSLAEGKVRIRSENITNNAKNIIVQLVKPVKINCVRPNNNTRTSVRIGPGQTFYATGEIIGDIRQAFCTVNESEWNETLQQVATQLREHFENKTIKFTNSSGGDLEITTHSFNCGGEFFYCNTSGLFNSTWNNNNTREKINGTESNSTITLHCRIKQIINRWQEVGQAMYAPPIPGVINCRSNITGLILTRDGGDGDNNTEIFRPGGGNMKDNWRSELYKYKVVKIEPLGVAPTRAKRRVVERAKRAVGIGAVFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHLLKLTVWGIKQLQARVLAVERYLQDQQLLGIWGCSGKLICTTNVPWNSSWSNKSQSEIWENMTWLQWDKEISSYTGIIYKLIEESQNQQEKNEQDLLALDKWASLWNWFEISKWLWYIKIFIMIVGGLIGLRIVFAVLSIINRVRQGYSPLSFQTHTPNPREPDRPERIEEEGGEQGRDRSIRLVSGFLALAWDDLRSLCLFSYH

Annotated regions:
phrase: VQARQLLSGIVQQQSNLLRAIEAQQHLLKLTVWGIKQLQARVLAVERYLQDQQLLGIWGCSGKLICTTNVPWNSSWSNKSQSEIWENMTWLQWDKEISSYTGIIYKLIEESQNQQEKNEQDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHLLKLTVWGIKQLQARVLAVERYLQDQQLLGIWGCSGKLICTTNVPWNSSWSNKSQSEIWENMTWLQWDKEISSYTGIIYKLIEESQNQQEKNEQDLLALDKWASLWNWFEISKWLWYIKIFIMIVGGLIGLRIVFAVLSIINRVRQGYSPLSFQ
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKDAETTLFCASDAKAYDTEAHNVWATHACVPTDPNPQEIYLENVTEEFNMWKNNMVEQMHTDIISLWDQSLKPCVQLTPLCVTLNCNNITINNITT
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: RGEIKNCSYNMTTVLRDKRRKVYSLFYRLDIVPLDEGNNNSAGSSDYRLINCNTSTITQACPKVSFDPIPIHYCAPAGFAILKCKDPDFNGTGPCKNVSTVQCTHGIKPVVSTQLLLNGSLAEGKVRIRSENITNNAKNIIVQLVKPVKINCVRPNNNTRTSVRIGPGQTFYATGEIIGDIRQAFCTVNESEWNETLQQVATQLREHFENKTIKFTNSSGGDLEITTHSFNCGGEFFYCNTSGLFNSTWNNNNTREKINGTESNSTITLHCRIKQIINRWQEVGQAMYAPPIPGVINCRSNITGLILTRDGGDGDNNTEIFRPGGGNMKDNWRSELYKYKVVKIEPLGVAPTRAKRRVVERAK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MKVTILGAGVIGVTTAYQLAKAGHDVTVVDRQAGPALETSFANAGEVSFGYCSPWAAPGIPQKALKWLFMKHAPLILRPKVDTAMLSWLVKMLSNCTSERYAVNKSRMLRLADYSRIALAEVRAGTGIAYDQRMQGTLQLFRTEQQLDASAKDVKALAADGIPYEVLDRDGCIRVEPALSHARDKIVGGLLTPKDETGDCFKFTNALAAKAVELGVQFLYGRTIKDLQVEGGQIRGVVTDQGAIASDAVVVALGSYSPLLLKQVGISLPVYPVKGYSLTIPIVDPARSPESTVMDETYKIAITRLGDRIRVGGMAEISGYTNDLGLARRNTLEHSVMDLFPGGDVSKAAFWSGLRPMTPDGTPVIGATKIRGLFLNTGHGTLGWTMSCGSARVISDLVSGHKAEIDTADLSVARYG

Annotated regions:
phrase: KVTILGAGVIGVTTAYQLAKAGHDVTVVDRQAGPALETSFANAGEVSFGYCSPWAAPGIPQKALKWLFMKHAPLILRPKVDTAMLSWLVKMLSNCTSERYAVNKSRMLRLADYSRIALAEVRAGTGIAYDQRMQGTLQLFRTEQQLDASAKDVKALAADGIPYEVLDRDGCIRVEPALSHARDKIVGGLLTPKDETGDCFKFTNALAAKAVELGVQFLYGRTIKDLQVEGGQIRGVVTDQGAIASDAVVVALGSYSPLLLKQVGISLPVYPVKGYSLTIPIVDPARSPESTVMDETYKIAITRLGDRIRVGGMAEISGYTNDLGLARRNTLEHSVMDLFPGGDVSKAAFWSGLRPMTPDGTPVIGATKIRGLFLNTGHGTLGWTMSCGSARVISD
type: DOMAIN
name: FAD-dep_OxRdtase
description: FAD dependent oxidoreductase
Protein sequence:
MMQKIQRFGSAMFVPVLLFAFAGIIVGISTLFKNKTLMGPLADPDGFWYQCWYIIEQGGWTVFNQMPLLFAIGIPVALAKKAQARACLEALTVYLTFNYFVSAILTVWGGAFGVDMNQEVGGTSGLTMIAGIKTLDTNIIGAIFISSIVVFLHNRYFDKKLPDFLGIFQGSTYIVMISFFIMIPIALAVSYIWPMVQSGIGSLQSFLVASGAVGVWIYTFLERILIPTGLHHFIYTPFIYGPAVAEGGIVTYWAQHLGEYSQSAKPLKELFPQGGFALHGNSKIFGIPGIALAFYVTAKKEKKKLVAGLLIPVTLTAIVAGITEPIEFTFLFISPFLFAVHAVLAATMSTVMYMAGVVGNMGGGLIEAVTLNWIPLFGSHGMTYVYQILIGLSFTAIYFFVFRFLILKFNIATPGREKDEQQETKLYSKKEYRERKNKDETASAAETADDTAFLYIEALGGKDNITEVTNCATRLRVSVKDETKVEPDSVFRALGAHGVVRNGKAFQVIIGLSVPQMRERVEKILNQ

Annotated regions:
phrase: DDTAFLYIEALGGKDNITEVTNCATRLRVSVKDETKVEPDSVFRALGAHGVVRNGKAFQVIIGLSVPQMRERVEKILN
type: DOMAIN
name: PTS_IIB_1
description: Phosphotransferase system, IIB component, type 1

phrase: MMQKIQRFGSAMFVPVLLFAFAGIIVGISTLFKNKTLMGPLADPDGFWYQCWYIIEQGGWTVFNQMPLLFAIGIPVALAKKAQARACLEALTVYLTFNYFVSAILTVWGGAFGVDMNQEVGGTSGLTMIAGIKTLDTNIIGAIFISSIVVFLHNRYFDKKLPDFLGIFQGSTYIVMISFFIMIPIALAVSYIWPMVQSGIGSLQSFLVASGAVGVWIYTFLERILIPTGLHHFIYTPFIYGPAVAEGGIVTYWAQHLGEYSQSAKPLKELFPQGGFALHGNSKIFGIPGIALAFYVTAKKEKKKLVAGLLIPVTLTAIVAGITEPIEFTFLFISPFLFAVHAVLAATMSTVMYMAGVVGNMGGGLIEAVTLNWIPLFGSHGMTYVYQILIGLSFTAIYFFVFRFLILKFNIATPGRE
type: DOMAIN
name: PTS_EIIC_1
description: Phosphotransferase system, EIIC component, type 1

phrase: GSAMFVPVLLFAFAGIIVGISTLFKNKTLMGPLADPDGFWYQCWYIIEQGGWTVFNQMPLLFAIGIPVALAKKAQARACLEALTVYLTFNYFVSAILTVWGGAFGVDMNQEVGGTSGLTMIAGIKTLDTNIIGAIFISSIVVFLHNRYFDKKLPDFLGIFQGSTYIVMISFFIMIPIALAVSYIWPMVQSGIGSLQSFLVASGAVGVWIYTFLERILIPTGLHHFIYTPFIYGPAVAEGGIVTYWAQHLGEYSQSAKPLKELFPQGGFALHGNSKIFGIPGIALAFYVTAKKEKKKLVAGLLIPVTLTAIVAGITEPIEFTFLFISPFLFAVHAVL
type: DOMAIN
name: PTS_EIIC
description: Phosphotransferase system, EIIC

phrase: GWTVFNQMPLLFAIGIPVALAKKAQARACLEALTVYLTFNYFVSAILTVWGGAFGVDMNQEVGGTSGLTMIAGIKTLDTNIIGAIFISSIVVFLHNRYFDKKLPDFLGIFQGSTYIVMISFFIMIPIALAVSYIWPMVQSGIGSLQSFLVASGAVGVWIYTFLERILIPTGLHHFIYTPFIYGPAVAEGGIVTYWAQHLGEYSQSAKPLKELFPQGGFALHGNSKIFGIPGIALAFYVTAKKEKKKLVAGLLIPVTLTAIVAGITEPIEFTFLFISPFLFAVHAVLAATMSTVMYMAG
type: DOMAIN
name: PTS_maltose/Glc_sub_IIC
description: Phosphotransferase system, maltose/glucose-specific subfamily IIC component

phrase: DDTAFLYIEALGGKDNITEVTNCATRLRVSVKDETKVEPDSVFRALGAHGVVRNGKAFQVIIGLSVPQMRERVEKI
type: CONSERVED_SITE
name: PTrfase_EIIB_Cys
description: Phosphotransferase system EIIB, cysteine phosphorylation site

phrase: KFNIATPGREKDEQQETKLYSKKEYRERKNKDETASAAETADDTAFLYIEALGGKDNITEVTNCATRLRVSVKDETKVEPDSVFRALGAHGVVRNGKAFQVII
type: DOMAIN
name: PTS_IIB_1
description: Phosphotransferase system, IIB component, type 1

phrase: YIEALGGKDNITEVTNCATRLRVSVKDETK
type: CONSERVED_SITE
name: PTrfase_EIIB_Cys
description: Phosphotransferase system EIIB, cysteine phosphorylation site

phrase: NITEVTNCATRLRVSVK
type: CONSERVED_SITE
name: PTrfase_EIIB_Cys
description: Phosphotransferase system EIIB, cysteine phosphorylation site
Protein sequence:
MDSEDNSAPRGERGIEQFSHVSVLSQEAIDFLAIRRGGTYLDATLGLGGHSYEIAKRLGAQGHLIALDKDTNALEMARRRLEQVPDDLKEDWPQITLLHASFAEMKQHIASKSLDGVLADLGISSMQLQDAGRGFSFQAEGPLDMRMNPHGDLTAEQVVNHTSERELADVIYEFGEERRSRRIARAICRARPIRTTAHLAQVISVAARPMNQAERRIHPATKTFQALRIFVNHELDDLKELLASVPSRLVPRGRLVVISFHSLEDRIVKDSLRDGASAGKYELLTKKPVTATEEEIDRNPRSRSAKLRAAARK

Annotated regions:
Protein sequence:
MSKTKCSIGLMSSMVAPAKEPNAMGPKEMELILVKEQNGVQLTNSTLINPAQTPVEPQERETWGKKIDFLLSVIGFAVDLANVWRFPYLCYKNGGGAFLVPYLFFMVIAGMPLFYMELALGQFNREGAAGVWKICPILKGVGFTVILISLYVGFFYNVIIAWALHYFFSSFTMELPWIHCNNTWNSPNCSDAHSGNSSDVSSFNDTFRTTPAAEYFERGVLHLHQSRGIGDLGAPRWQLTSCLVLVIVLLYFSLWKGVKTSGKVRFKVVGMPCVLSSASMTSMSQLPPPPTHVSLSLSLGLLQVWIDAATQICFSLGVGFGVLIAFSSYNKFTNNCYRDAIITTSINSLTSFFSGFVIFSFLGYMAQKHSVPIGDVAKDGPGLIFIIYPEAIATLPLSSAWAVVFFIMLLTLGIDSAMGGMESVITGLTDEFQLLHRHRELFTLFIVLATFLLSLFCVTNGGIYVFTLLDHFAAGTSILFGVLIEAIGVAWFYGVGQFSDDIKQMIGRRPGLYWRLCWKFVSPCFLLFVVVVSIVTFRPPHYGAYIFPDWANVLGWVIATSSMSMVPIYATYKFYSLPGSFREKLAYAITPEKEHELIVRGEVRQFTLRHWLMV

Annotated regions:
Protein sequence:
MSAGALQQLAAMGIQPRRLVSDSRRLEAGDVFVAYPGERVDGRTHIPQAIKQGAAAVLWERVDGRWLDDWHVPNLAVEGLREQVSEIAGEFYGHPSKSLWMIGVTGTNGKTSCSHWLAQCLTALGHKAAVVGTLGNGFPNALSEAINTTPDPIILQSLLADFVAQGADAVAMEVSSHGLAQGRVSGIKFDVALLTNLSRDHLDYHGDMKAYAATKSRLFDWPALKCAVLNADDTFGARLAIRLHGQGKRVVTYGLNGGAVSCTALRFTENGVAMKVMTPWGYAEISAPVLGRFNAANVLAVLATLLASDIPLERATSVLRDIGPVPGRMQRLGGGSLPLVVVDYAHTPDALAKILATLRDQCTGRLICVFGCGGNRDKGKRPLMGEVVSRLADLAIVTSDNPRQEDPQAIINEIISGMDSDYHIEDDRAAAIDSAIRMAAAGDVVLLAGKGHEAYQQIGDDKLPFSDAEVAQRVLDSLEEAA

Annotated regions:
phrase: GRMQRLGGGSLPLVVVDYAHTPDALAKILATLRDQCTGRLICVFGCGGNRDKGKRPLMGEVVSRLADLAIVTSDNPRQEDPQAIINEIISGMDSDYHIEDDRAAAIDSAIRMAAAGDVVLLAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: VTGTNGKTSCSHWLAQCLTALGHKAAVVGTLGNGFPNALSEAINTTPDPIILQSLLADFVAQGADAVAMEVSSHGLAQGRVSGIKFDVALLTNLSRDHLDYHGDMKAYAATKSRLFDWPALKCAVLNADDTFGARLAIRLHGQGKRVVTYGLNGGAVSCTALRFTENGVAMKVMTPWGYAEISAPVLGRFNAANVLAVLA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: DSRRLEAGDVFVAYPGERVDGRTHIPQAIKQGAAAVLWERVDGRWLDDWHVPNLAVEGLREQVSEIAGEF
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain
Protein sequence:
MIYQSNTLQVKELQDGIAELSFCSPESVNKLDVATLESLDKALDALKQATSVSGLILTSNKNAFIVGADITEFLGLFAKPEEELDQWLRYANDVFNKLEDLPFPTLSVLRGHTLGGGCECVLATDFRIGDKTTSIGLPETKLGIMPGFGGSVRLPRVIGADSAMEIITQGKACRADEALKLGLLDALVDSDQLFESAIKTITQAKNEQIDWQSRRQQKTSPLTLSKLEAMMSFTMAKGLVAQKAGPHYPAPITSVKAIEEAARLSRDEALDIERKHFVTLAKTEVAQALVGLFLSDQYIKGLAKKAEKSAQTDTKRAAVLGAGIMGGGIAYQSALKGVPVIMKDIAQASLDLGMNEASKLLNKRLSRGRLDGFKMAGILSSITPSLHYAGIEQADIVVEAVVENPKIKAAVLAEVEDKVEDNAVVTSNTSTIPINLLAKSLKRPENFCGMHFFNPVHRMPLVEIIRGEKTSDETINRVVAYAAKMGKSPIVVNDCPGFFVNRVLFPYFGGFSDLLRDGADFTQVDKIMERKFGWPMGPAYLLDVVGIDTAHHAQAVMAQGFPERMGKNGRDVIDALFEADKYGQKNGSGFYSYSVDKKGRPKKTFDDSILPTLESVTNDKQSFDEQTIIQRMMIPMINEVALCLEEGIIASPQEADMALVYGLAFPPFRGGVFRYLDTIGVANYVAMAANYKELGPLYQVPQLLLDMAQDNGSFYNAQVEQSL

Annotated regions:
phrase: LSVLRGHTLGGGCECVLATD
type: CONSERVED_SITE
name: Enoyl-CoA_hyd/isom_CS
description: Enoyl-CoA hydratase/isomerase, conserved site

phrase: DCPGFFVNRVLFPYFGGFSDLLRD
type: CONSERVED_SITE
name: 3-OHacyl-CoA_DH_CS
description: 3-hydroxyacyl-CoA dehydrogenase, conserved site

phrase: AAVLGAGIMGGGIAYQSALKGVPVIMKDIAQASLDLGMNEASKLLNKRLSRGRLDGFKMAGILSSITPSLHYAGIEQADIVVEAVVENPKIKAAVLAEVEDKVEDNAVVTSNTSTIPINLLAKSLKRPENFCGMHFFNPVHRMPLVEIIRGEKTSDETINRVVAYAAKMGKSPIVVND
type: DOMAIN
name: 3-OHacyl-CoA_DH_NAD-bd
description: 3-hydroxyacyl-CoA dehydrogenase, NAD binding

phrase: GFFVNRVLFPYFGGFSDLLRDGADFTQVDKIMERKFGWPMGPAYLLDVVGIDTAHHAQAVMAQGFPERMGKNGRDVIDALFEADKYGQKNGSGFYS
type: DOMAIN
name: 3HC_DH_C
description: 3-hydroxyacyl-CoA dehydrogenase, C-terminal

phrase: IIQRMMIPMINEVALCLEEGIIASPQEADMALVYGLAFPPFRGGVFRYLDTIGVANYVAMAANYKELGPLYQVPQLLLDMA
type: DOMAIN
name: 3HC_DH_C
description: 3-hydroxyacyl-CoA dehydrogenase, C-terminal
Protein sequence:
MAEVKYVFVTGGVASSLGKGIISASMAKLLQARGYSVTIQKLDPYINVDSGTLNPYEHGECYVTLDGAETDLDLGHYERFLNIPTSQANNVTTGQVYQTVINKERRGDYLGKTVQVIPHITDEIKRRIKLVTLGKKFDIVITEIGGTVGDIESLPYIEAVRQMKWELGQKNCIVIHLTLVPYLSASGEQKTKPTQHSVKALLEAGIQPDVLVLRTEKSLSEDIKKKVALFCNVEEYAVVESVDVSTIYEVPMRMLQENLDQTVLRKLDLSPGQEPDLKEWHEFLERIKNPEYNVNIGLVGKYVELHDAYKSISESFVHGGSANKCRVNTKLISSESIDETNVTEILKDLDGILVAPGFGSRGIEGKIITAKYARENNIPLFGICLGMQCAVIEFARNVLGFSDAHTTEIDHKTKYPVIDLMEEQKNITYMGGTMRLGGYKCILDPNSRAYRIYGTKEIIERHRHRYEFNNKYLDDFVKKGMIPAGINPESNLIEIMELPSHRWFTGVQFHPEYSSTVVKPHPLFVDFIRACIEYNKEKNDSN

Annotated regions:
phrase: LHDAYKSISESFVHGGSANKCRVNTKLISSESIDETNVTEILKDLDGILVAPGFGSRGIEGKIITAKYARENNIPLFGICLGMQCAVIEFARNVLGFSDAHTTEIDHKTKYPVIDLMEEQKNITYMGGTMRLGGYKCILDPNSRAYRIYGTKEIIERHRHRYEFNNKYLDDFVKKGMIPAGINPESNLIEIMELPSHRWFTGVQFHPEYSSTVVKPHPLFVDFI
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: VNIGLVGKYVELHDAYKSISESFVHGGSANKCRVNTKLISSESIDETNVTEILKDLDGILVAPGFGSRGIEGKIITAKYARENNIPLFGICLGMQCAVIEFARNVLGFSDAHTTEIDHKTKYPVIDLMEEQKNITYMGGTMRLGGYKCILDPNSRAYRIYGTKEIIERHRHRYEFNNKYLDDFVKKGMIPAGINPESNLIEIMELPSHRWFTGVQFHPEYSSTVVKPHPLFVDF
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain

phrase: KYVFVTGGVASSLGKGIISASMAKLLQARGYSVTIQKLDPYINVDSGTLNPYEHGECYVTLDGAETDLDLGHYERFLNIPTSQANNVTTGQVYQTVINKERRGDYLGKTVQVIPHITDEIKRRIKLVTLGKKFDIVITEIGGTVGDIESLPYIEAVRQMKWELGQKNCIVIHLTLVPYLSASGEQKTKPTQHSVKALLEAGIQPDVLVLRTEKSLSEDIKKKVALFCNVEEYAVVESVDVSTIYEVPMRMLQENLDQTVL
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: KYVFVTGGVASSLGKGIISASMAKLLQARGYSVTIQKLDPYINVDSGTLNPYEHGECYVTLDGAETDLDLGHYERFLNIPTSQANNVTTGQVYQTVINKERRGDYLGKTVQVIPHITDEIKRRIKLVTLGKKFDIVITEIGGTVGDIESLPYIEAVRQMKWELGQKNCIVIHLTLVPYLSASGEQKTKPTQHSVKALLEAGIQPDVLVLRTEKSLSEDIKKKVALFCNVEEYAVVESVDVSTIYEVPMRMLQENLDQTVLRKLD
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal
Protein sequence:
MTKINNKLISKPFTLENKNIVLCVCGSISAYKSADLASKLIQEGAKVNVILSNSAQKFIGKATFEAITHNKAILGLWDNNTNLNIDHVALANEADIIVISPATANTIGKLAMGVSDSPITNTVLATSSPVIIAPAMDGDMFESFQTQKNIKILKEKKFEFIGPENGRLASGLIGKGRLSESKKILGIIRKTLGKKGDFIGEKIVITAGGTHQPIDPVRYITNKSSGKMGHFIAEAAIDRGAEVVLITASEMDPPIGVELVKVDTAKSMENAVISSTKDASILIMAAAISDFTPEKISSRKIKKMNDTPINLKLKSVNDFSHRIKSNIAKIFFAAESENLEENAELKLKSKNADFIVANNIVEKNSGFSYDTNKVTIIDKNGDKIKLPLMHKLRLANKILDKIKITKKNGEK

Annotated regions:
phrase: GEKIVITAGGTHQPIDPVRYITNKSSGKMGHFIAEAAIDRGAEVVLITASEMDPPIGVELVKVDTAKSMENAVISSTKDASILIMAAAISDFTPEKISSRKIKKMNDTPINLKLKSVNDFSHRIKSNIAKIFFAAESENLEENAELKLKSKNADFIVANNIVEKNSGFSYDTNKVTI
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal

phrase: KNIVLCVCGSISAYKSADLASKLIQEGAKVNVILSNSAQKFIGKATFEAITHNKAILGLWDNNTNLNIDHVALANEADIIVISPATANTIGKLAMGVSDSPITNTVLATSSPVIIAPAMDGDMFESFQTQKNIKILKEKKFEFIGPENGRLASGLIGKGRLSESKKILGII
type: DOMAIN
name: Flavoprotein
description: Flavoprotein
Protein sequence:
MADVNLLDFDAAGLTAFVESLGEKPFRARQLLRWVHRRGASGFDAMTDLAKSLRGKLAERATIAAPAVVRDSTSADGTRKWLLDVGQGNAIETVFIPEDDRGTLCVSTQAGCAVNCAFCSTGKQGFSRNLTTAEIVGQLWWAEHALRAAFGLTAESERVISNVVLMGMGEPLQNYEAVLPALRLMLDDDAYGLSRRRVTVSTSGMVPQIDRLAADCPVALAVSLHAPNDRLRDELVPLNRKYPLRELLAACRRYLPRAPRDFITFEYVMLDGVNDSDAHARELVALTADVPCKFNLIPFNPFPGSTLRRSPAERIRAFAQILADAGAVATTRKTRGDDIDAACGQLAGAVRDRTRRATRALPPVVAAAR

Annotated regions:
phrase: EDDRGTLCVSTQAGCAVNCAFCSTGKQGFSRNLTTAEIVGQLWWAEHALRAAFGLTAESERVISNVVLMGMGEPLQNYEAVLPALRLMLDDDAYGLSRRRVTVSTSGMVPQIDRLAADCPVALAVSLHAPNDRLRDELVPLNRKYPLRELLAACRRYLPRAPRDFITFEYVMLDGVNDSDAHARELVALTADVPCKFNLIPFNPFPGSTLRRSPAERIRAFAQILADAGAVATTRKTRGD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VNLLDFDAAGLTAFVESLGEKPFRARQLLRWVHRRGASGFDAMTDLAKSLRGKLAERAT
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: STQAGCAVNCAFCSTGKQGFSRNLTTAEIVGQLWWAEHALRAAFGLTAESERVISNVVLMGMGEPLQNYEAVLPALRLMLDDDAYGLSRRRVTVSTSGMVPQIDRLAADCPVALAVSLHAPNDRLRDELVPLNRKYPLRELLAACRRYLPRAPRDFITFEYVMLDGVNDSDA
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MANGFNVAVAGATGAVGVEMVKTLEKRNFPVKNLKLLASARSAGKTMKFKGEDVVIEEMTHDSFKGVDIALFSAGGDISREYRPFVVESGAVMIDNSSAFRMDDDVPLVVPEVNAEDIKLHKGVIANPNCTTAIMLVAVAPLHRAKGLRRIVAATYQAASGAGAKGMHELIVQAREVLDGKAVNPVAFAHQIAFNLIPHIDAFKENGYTKEELKMLNESRKMLHLPELLVSCTCVRIPVLRAHSEALNLEFENDITPEEARAIIEAAPGVQLVDDPADKRYPMPLDATEKYDVLCGRIRQDISRNDKRGLDIFVSGDQVLKGAALNAVQIAELL

Annotated regions:
phrase: APLHRAKGLRRIVAATYQAASGAGAKGMHELIVQAREVLDGKAVNPVAFAHQIAFNLIPHIDAFKENGYTKEELKMLNESRKMLHLPELLVSCTCVRIPVLRAHSEALNLEFENDITPEEARAIIEAAPGVQLVDDPADKRYPMPLDATEKYDVLCGRIRQDISRNDKRGLDIFVSGDQVL
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: NVAVAGATGAVGVEMVKTLEKRNFPVKNLKLLASARSAGKTMKFKGEDVVIEEMTHDSFKGVDIALFSAGGDISREYRPFVVESGAVMIDNSSAFRMDDDVPLVVPEVNAEDIK
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: NVAVAGATGAVGVEMVKTLEKRNFPVKNLKLLASARSAGKTMKFKGEDVVIEEMTHDSFKGVDIALFSAGGDISREYRPFVVESGAVMIDNSSAFRMDDDVPLVVPEVNAEDIKL
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MPTFDTTKQIFLCGLPSVGKTSFGRLLAQFLSLPFFDTDHLLSARFHGDSPKAIYQRFGEEGFCQEELLTLINLPVIPSVVALGGKTLLDKQIYEHITQRENILLVLLDLPFATLYQRLQKKPLPESLKNTPSLENALFQRLEKLRLLTPHIFSLQAATSLHEIGEVCQSFCLQFLTAQEIPYA

Annotated regions:
Protein sequence:
MSDQYQGETRFIFVTGGVLSALGKGIASASIGRLLVSRGFRVQIQKFDPYLNVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFTDENTSRASNVTAGAVYNSVIKRERRGDYLGGTVQVIPHITDEIKNRILIVAETKQVDFVITEIGGTVGDIESLAFLEAIRQLYTDLGPRRAMFIHLTLVPYIVHAGEMKTKPTQHSVNELRRIGIQPDALICRSVSGLDRDIRKKIAQFASLPTDSVISGQDVDNVYKIPLMYRAEGLDDFILEHFHMEDAPPPDLTEWEAMLRLAENTEGTVKIALVGKYIQLADSYKSVIEALEHGGIHNGVDVDIDLVDSEDFDISRLEGADGILIPGGFGERGVEGKVEAARYARENGIPYLGICLGMQIAVIEFARHVAGMDGANSAEFDPETPFPVVDLLPEQKEVSDMGGTMRLGADPVKLHEGTRALDIFGEAVIYKRHRHRYEVNNLLRARLEDQGLICSGTSPDERLVEVVELDDHPFYVASQFHPEFNSRPNRPEPLFREFMKAAAKAATEKPATSGDGESEDSPVTVETQEA

Annotated regions:
phrase: RFIFVTGGVLSALGKGIASASIGRLLVSRGFRVQIQKFDPYLNVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFTDENTSRASNVTAGAVYNSVIKRERRGDYLGGTVQVIPHITDEIKNRILIVAETKQVDFVITEIGGTVGDIESLAFLEAIRQLYTDLGPRRAMFIHLTLVPYIVHAGEMKTKPTQHSVNELRRIGIQPDALICRSVSGLDRDIRKKIAQFASLPTDSVISGQDVDNVYKIPLMYRAEGLDDFIL
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: LADSYKSVIEALEHGGIHNGVDVDIDLVDSEDFDISRLEGADGILIPGGFGERGVEGKVEAARYARENGIPYLGICLGMQIAVIEFARHVAGMDGANSAEFDPETPFPVVDLLPEQKEVSDMGGTMRLGADPVKLHEGTRALDIFGEAVIYKRHRHRYEVNNLLRARLEDQGLICSGTSPDERLVEVVELDDHPFYVASQFHPEFNSRPNRPEPLFREFM
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: VKIALVGKYIQLADSYKSVIEALEHGGIHNGVDVDIDLVDSEDFDISRLEGADGILIPGGFGERGVEGKVEAARYARENGIPYLGICLGMQIAVIEFARHVAGMDGANSAEFDPETPFPVVDLLPEQKEVSDMGGTMRLGADPVKLHEGTRALDIFGEAVIYKRHRHRYEVNNLLRARLEDQGLICSGTSPDERLVEVVELDDHPFYVASQFHPEFNSRPNRPEPLFREF
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain

phrase: RFIFVTGGVLSALGKGIASASIGRLLVSRGFRVQIQKFDPYLNVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFTDENTSRASNVTAGAVYNSVIKRERRGDYLGGTVQVIPHITDEIKNRILIVAETKQVDFVITEIGGTVGDIESLAFLEAIRQLYTDLGPRRAMFIHLTLVPYIVHAGEMKTKPTQHSVNELRRIGIQPDALICRSVSGLDRDIRKKIAQFASLPTDSVISGQDVDNVYKIPLMYRAEGLDDFILEHFH
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal
Protein sequence:
MNTLISPWPPHITVAAVIEREGKXLLVEEISDGLIVYNQPAGHLEPNESILAAISRETLEETGWEFSPKSIVGIYFYQSELNQITYQRICFAGKLGKQTEHPLDVGIIRSVWLSRDEIIQQAAKMRSPMVLQCIDDYLAKTAYPLNLITXFTFMMKAPHNTRVIVGMSGGVDSSVSAYLLKQQGYQVEGVFMQNWTVENDDPYCTATQDLLDARAVCDRLHIPLQTVNFAKEYWDRVFQYFLDEYAAGRTPNPDIMCNKEIKFKAFLDYALSRGADLIATGHYARVQPINDHYQLLKGLDDNKDQSYFLYTLGQQQLKYCLFPVGELHKAQVRAIATEIGLINHAXKDSTGICFIGERKFKTFARXYLLCKPGNIETPEQQIIGKHDGLMYYTLGQRKGLGIGGQKDSIEAPWYVIXKDISRNTLIVAQQHDHPWIMSTGLICADVNWTTEVPTFPLTCQAKTRYRQADQACVITKIDADHYQVNFTDAQWAVTPGQSVVFYDKEICLGGGIIQQANNITNNNAYECPKSSNYV

Annotated regions:
phrase: PPHITVAAVIEREGKXLLVEEISDGLIVYNQPAGHLEPNESILAAISRETLEETGWEFSPKSIVGIYFYQSELNQITYQRICFAGKLGKQTEHPLDVGIIRSVWLSRDEIIQQAAKMRSPMVLQCI
type: DOMAIN
name: NUDIX_hydrolase_dom
description: NUDIX hydrolase domain

phrase: PHITVAAVIEREGKXLLVEEISDGLIVYNQPAGHLEPNESILAAISRETLEETGWEFSPKSIVGIYFYQSELNQITYQRICFAGKLGKQTEHPLDVGIIRSVWLSRDEIIQQA
type: DOMAIN
name: NUDIX_hydrolase_dom
description: NUDIX hydrolase domain

phrase: GHLEPNESILAAISRETLEET
type: CONSERVED_SITE
name: NUDIX_hydrolase_CS
description: NUDIX hydrolase, conserved site

phrase: TFARXYLLCKPGNIETPEQQIIGKHDGLMYYTLGQRKGLGIGGQKDSIEAPWYVIXKDISRNTLIVA
type: DOMAIN
name: MnmA-like_central
description: tRNA-specific 2-thiouridylase MnmA-like, central domain

phrase: TGLICADVNWTTEVPTFPLTCQAKTRYRQADQACVITKIDADHYQVNFTDAQWAVTPGQSVVFYDKEICLGGGI
type: DOMAIN
name: MnmA-like_C
description: tRNA-specific 2-thiouridylase MnmA-like, C-terminal domain
Protein sequence:
MTSRVNLLDFDEAGLRAFFESIGEKPFRAQQVLKWIFHHAETDISAMTNLGIALRQKLELMAEIRLPEILREQRSADGTVKWLIGFQGGNAVETVYIPEPKRGTLCVSSQVGCALNCTFCSTGAQGFARNLTCAEIIGQVWLAAKALGHERNGQRRITNIVMMGMGEPLLNFDAVVPAMSLMRNDLGFGFAAKRVTLSTAGLVPGIYRLRDTLDVALAVSLHAPVDDVRTELVPLNRKYPIAELMQACRDYVSEKHKRTVTFEYTLIDGVNDHPEHARKLVKLLRTVPSKLNLIPFNPFPGTQYRCSSQQRIVQFQEIVMRGGLIATVRKTRGEDIDAACGQLVGKVQDRTKRSERIKSKMAETNP

Annotated regions:
phrase: SRVNLLDFDEAGLRAFFESIGEKPFRAQQVLKWIFHHAETDISAMTNLGIALRQKLELMAEIRLPEILREQRSADGTVKWLIGFQGGNAVETVYIPEPKRGTLCVSSQVGCALNCTFCSTGAQGFARNLTCAEIIGQVWLAAKALGHERNGQRRITNIVMMGMGEPLLNFDAVVPAMSLMRNDLGFGFAAKRVTLSTAGLVPGIYRLRDTLDVALAVSLHAPVDDVRTELVPLNRKYPIAELMQACRDYVSEKHKRTVTFEYTLIDGVNDHPEHARKLVKLLRTVPSKLNLIPFNPFPGTQYRCSSQQRIVQFQEIVMRGGLIATVRKTRGEDIDAACGQLVGKVQDRTKRS
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: EPKRGTLCVSSQVGCALNCTFCSTGAQGFARNLTCAEIIGQVWLAAKALGHERNGQRRITNIVMMGMGEPLLNFDAVVPAMSLMRNDLGFGFAAKRVTLSTAGLVPGIYRLRDTLDVALAVSLHAPVDDVRTELVPLNRKYPIAELMQACRDYVSEKHKRTVTFEYTLIDGVNDHPEHARKLVKLLRTVPSKLNLIPFNPFPGTQYRCSSQQRIVQFQEIVMRGGLIATVRKTRGE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SSQVGCALNCTFCSTGAQGFARNLTCAEIIGQVWLAAKALGHERNGQRRITNIVMMGMGEPLLNFDAVVPAMSLMRNDLGFGFAAKRVTLSTAGLVPGIYRLRDTLDVALAVSLHAPVDDVRTELVPLNRKYPIAELMQACRDYVSEKHKRTVTFEYTLIDGVNDHPEHAR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VNLLDFDEAGLRAFFESIGEKPFRAQQVLKWIFHHAETDISAMTNLGIALRQKLELMAE
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MSKHIFVTGGVVSGLGKGITAASLGRLLKCRGYKVAAQKLDPYMNVDPGTMSPLQHGEVFVTEDGAETDLDLGHYERFIDEDLNKYSNLTSGKTYWTVLQKERNGEYLGSTVQIIPHVTNEIKSFIYALADKTKADVVITEIGGTTGDIESQPFLEAIRQISHEVGKENCLFIHVTLVPYIKGSEEHKSKPTQHSVKELMGSGIFPDIIVCRSDEKIEESVLNKIALFCNVKKDCVIENITVPVLYEAPIMLSKQGLDRVALRELGLKENNINLTEWNNMLDMIASSHRHIKIALVGKYIALHDAYLSVIESLKHAGWHNGVQVDIKWTDSEEVTPSTVDELFKDVDGILIPGGFGSRGIEGKIEACRYARENNIPYLGICLGMQIAVIEYARNVLGYKDANSSEFDPESKHKVIDLMETQKNIKKKGGTMRLGAYPCKIKEGLLLSRVYEGESLIQERHRHRYEFSNAFREELEAKGLSVVGTSPDETLVEAVSIEKNCFFLGVQYHPEFKSRPNRPSPVFYSFIKAAANR

Annotated regions:
phrase: KHIFVTGGVVSGLGKGITAASLGRLLKCRGYKVAAQKLDPYMNVDPGTMSPLQHGEVFVTEDGAETDLDLGHYERFIDEDLNKYSNLTSGKTYWTVLQKERNGEYLGSTVQIIPHVTNEIKSFIYALADKTKADVVITEIGGTTGDIESQPFLEAIRQISHEVGKENCLFIHVTLVPYIKGSEEHKSKPTQHSVKELMGSGIFPDIIVCRSDEKIEESVLNKIALFCNVKKDCVIENITVPVLYEAPIMLSKQGLDRVALRELG
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: IKIALVGKYIALHDAYLSVIESLKHAGWHNGVQVDIKWTDSEEVTPSTVDELFKDVDGILIPGGFGSRGIEGKIEACRYARENNIPYLGICLGMQIAVIEYARNVLGYKDANSSEFDPESKHKVIDLMETQKNIKKKGGTMRLGAYPCKIKEGLLLSRVYEGESLIQERHRHRYEFSNAFREELEAKGLSVVGTSPDETLVEAVSIEKNCFFLGVQYHPEFKSRPNRPSPVFYSF
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain

phrase: LHDAYLSVIESLKHAGWHNGVQVDIKWTDSEEVTPSTVDELFKDVDGILIPGGFGSRGIEGKIEACRYARENNIPYLGICLGMQIAVIEYARNVLGYKDANSSEFDPESKHKVIDLMETQKNIKKKGGTMRLGAYPCKIKEGLLLSRVYEGESLIQERHRHRYEFSNAFREELEAKGLSVVGTSPDETLVEAVSIEKNCFFLGVQYHPEFKSRPNRPSPVFYSFI
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: KHIFVTGGVVSGLGKGITAASLGRLLKCRGYKVAAQKLDPYMNVDPGTMSPLQHGEVFVTEDGAETDLDLGHYERFIDEDLNKYSNLTSGKTYWTVLQKERNGEYLGSTVQIIPHVTNEIKSFIYALADKTKADVVITEIGGTTGDIESQPFLEAIRQISHEVGKENCLFIHVTLVPYIKGSEEHKSKPTQHSVKELMGSGIFPDIIVCRSDEKIEESVLNKIALFCNVKKDCVIENITVPVLYEAPIMLSKQGLDRVAL
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal
Protein sequence:
MARSLTWRCCPWCLTEDEKAAARVDQEINRILLEQKKQDRGELKLLLLGPGESGKSTFIKQMRIIHGAGYSEEERKGFRPLVYQNIFVSMRAMIEAMERLQIPFSRPESKHHASLVMSQDPYKVTTFEKRYAAAMQWLWRDAGIRAYYERRREFHLLDSAVYYLSHLERITEEGYVPTAQDVLRSRMPTTGINEYCFSVQKTNLRIVDVGGQKSERKKWIHCFENVIALIYLASLSEYDQCLEENNQENRMKESLALFGTILELPWFKSTSVILFLNKTDILEEKIPTSHLATYFPSFQGPKQDAEAAKRFILDMYTRMYTGCVDGPEGSKKGARSRRLFSHYTCATDTQNIRKVFKDVRDSVLARYLDEINLL

Annotated regions: