nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MLQTTPPDLLLGAPDLREAAAAWLAVLKTERRFSENTVEAYGRDLRQFLAHLARSGAAPDIPALVALKPRDLRAFMAARRAEGVSGRSLMRALAALRSFARHLDREGHGTVSALSAVRSPKVERRLPRPLPVAAAVAMASPDIRAGEDRPDWVLARDAAVLALLYGAGLRIGEALGIRRKDAPVGDIDTLTILGKGQKTRMVPVIAPVQAAVADYLAVCPHPLPPDGPLFVGQKGGPLSPRIVQLAVASLRGALGLPDSATPHALRHSFATHLLARQGDLRAIQDLLGHASLATTQVYTKVDSARLLSAFDAAHPRAGRPGG

Annotated regions:
phrase: PDLREAAAAWLAVLKTERRFSENTVEAYGRDLRQFLAHLARSGAAPDIPALVALKPRDLRAFMAARRAEGVSGRSLMRALAALRSFARHL
type: DOMAIN
name: CB
description: Core-binding (CB) domain

phrase: RLPRPLPVAAAVAMASPDIRAGEDRPDWVLARDAAVLALLYGAGLRIGEALGIRRKDAPVGDIDTLTILGKGQKTRMVPVIAPVQAAVADYLAVCPHPLPPDGPLFVGQKGGPLSPRIVQLAVASLRGALGLPDSATPHALRHSFATHLLARQGDLRAIQDLLGHASLATTQVYTKVDSARLLSAF
type: DOMAIN
name: Integrase_catalytic
description: Integrase, catalytic domain

phrase: ARDAAVLALLYGAGLRIGEALGIRRKDAPVGDIDTLTILGKGQKTRMVPVIAPVQAAVADYLAVCPHPLPPDGPLFVGQKGGPLSPRIVQLAVASLRGALGLPDSATPHALRHSFATHLLARQGDLRAIQDLLGHASLATTQVYTKVD
type: DOMAIN
name: Integrase_catalytic
description: Integrase, catalytic domain

phrase: AWLAVLKTERRFSENTVEAYGRDLRQFLAHLARSGAAPDIPALVALKPRDLRAFMAARRAEGVSGRSLMRALAALRSFARHLDRE
type: DOMAIN
name: Integrase_SAM-like_N
description: Integrase, SAM-like, N-terminal
Protein sequence:
MSMDNNDDHESKLSILMDMFPAISKSKLQVHLLENNNDLDLTIGLLLKENDDKSTVDNELHQLYDMFPQLDCSVIKDQFVINEKSVESTISDLLNYETLQKLKDNQANSPDSVKRNEKKNNWESTNDHIESIIKFTDAPKNIAQEYLAENGFDTVKAIIKIILDYYDKRDFKKDVDTFKVKRSPNTTVRGGRVQSSTGLAHVLKKGKESANVAQESLKRPRSYKHSLDSPQMVELNELVADNRDLKAINHEFLQKCLQFYDGDVVKVLNISSLLIEDDKNITKTWNFDEGFTLTSRDNCKQHLPKFSTPQISRRNEVGNTYKLPLHDKETPEGAVPVINNLFQTYRLDFHGFLPSEAVSTLKLALNKWWSKEVAERELNSHNINSYGSKVQFVSPLIVVTGRGIHSIGGISKVRLQVKSFLEKNHYIFWEESSYFRIEGKKKK

Annotated regions:
phrase: LDFHGFLPSEAVSTLKLALNKWWSKEVAERELNSHNINSYGSKVQFVSPLIVVTGRGIHSIGGISKVRLQVKSFLEKNHYIFWEESSYFRIEGKKK
type: DOMAIN
name: Smr_dom
description: Smr domain

phrase: DNELHQLYDMFPQLDCSVIKDQFVINEKSVESTISDL
type: DOMAIN
name: CUE2_CUE2
description: Ubiquitin-binding protein CUE2, CUE domain 2

phrase: TVDNELHQLYDMFPQLDCSVIKDQFVINEKSVESTISDLLNY
type: DOMAIN
name: CUE
description: Ubiquitin system component CUE

phrase: DHESKLSILMDMFPAISKSKLQVHLLENNNDLDLTIGLLLKE
type: DOMAIN
name: CUE
description: Ubiquitin system component CUE

phrase: TYRLDFHGFLPSEAVSTLKLALNKWWSKEVAERELNSHNINSYGSKVQFVSPLIVVTGRGIHSIGGISKVRLQVKSFLEKNHYIFWEESSYFRIEG
type: DOMAIN
name: Smr_dom
description: Smr domain

phrase: HESKLSILMDMFPAISKSKLQVHLLENNNDLDLTIGLL
type: DOMAIN
name: CUE
description: Ubiquitin system component CUE

phrase: DNELHQLYDMFPQLDCSVIKDQFVINEKSVESTISDLL
type: DOMAIN
name: CUE
description: Ubiquitin system component CUE

phrase: TVDNELHQLYDMFPQLDCSVIKDQFVINEKSVESTISDLLNYE
type: DOMAIN
name: CUE
description: Ubiquitin system component CUE

phrase: DHESKLSILMDMFPAISKSKLQVHLLENNNDLDLTIGLLLKEN
type: DOMAIN
name: CUE
description: Ubiquitin system component CUE

phrase: ESKLSILMDMFPAISKSKLQVHLLENNNDLDLTIGLLLKEN
type: DOMAIN
name: CUE2_CUE1
description: Ubiquitin-binding protein CUE2, CUE domain 1
Protein sequence:
MAPRGDRGIVVTGARNQFAPDLEPGGAVSCMRSSLSFLSLVFDAGLRDALSAEAVDGCLVEGGAWTRASAGGAPPRMCSVVELPTFLEYPSGRGLRCVFSRVYGEVAFFGQPSPGLLETQCPAHDFFAGPWARRPLSYTLVTIGALGMGLYRDGDDAYLFDPHGLREGSPAFVAKVRAGEVYTYLTYYTQEHPEARWAGAMVFFVPWGPEPATPAGLAAAALRLYGASETYLQDEPFVERRAVASHPLRGDDVPGTPPVGEGGGGTPGTARGATSRPPPPEPSAPADPGPAAPPSGVWGAALAGAPLALPAPPPSSDSAPATDVDDTDGEDGAMEVVSPLPHPKQHYPLGFPKRRRPTWTPPSSLEDLSAGRHHPKRASLPTRTRRAARHAASPFARGPGGGDQPRPSTPTPAPAPVPVPATTPAPAPAPLPTADPLPAADPASSESPAPPPERQPAADATEPVPDDATEPAPDDATRKALDALRERRPPEPPACDPAELLGRYPDTGGVVSRLAEREVTIAREVAECSRLTVNALRSPFPDAPGLLQHCIILLFERVLAFLIENGARTHAGAGAEGPASALLDLTLGLLPNRTAVGDFLASTRMTLADVAAHVPLIQPVIEEGSGVGRLALAKLVLVARDVIRATDELHGELAELERQLRATPPTEVYARLSEWLLERSRAGPDTLFAPATPTHPEPLLQRVQALAGFARGEEARAAAEDREVRGALDALARSVDAVARRGGPLAVAAPEAPGGTEDPPPHPLSPQA

Annotated regions:
phrase: VVTGARNQFAPDLEPGGAVSCMRSSLSFLSLVFDAGLRDALSAEAVDGCLVEGGAWTRASAGGAPPRMCSVVELPTFLEYPSGRGLRCVFSRVYGEVAFFGQPSPGLLETQCPAHDFFAGPWARRPLSYTLVTIGALGMGLYRDGDDAYLFDPHGLREGSPAFVAKVRAGEVYTYLTYYTQEHPEARWAGAMVFFVPWGPEPATPAGLAAAALRLYG
type: DOMAIN
name: Herpes_teg_USP
description: Herpesvirus large tegument protein, USP domain

phrase: RNQFAPDLEPGGAVSCMRSSLSFLSLVFDAGLRDALSAEAVDGCLVEGGAWTRASAGGAPPRMCSVVELPTFLEYPSGRGLRCVFSRVYGEVAFFGQPSPGLLETQCPAHDFFAGPWARRPLSYTLVTIGALGMGLYRDGDDAYLFDPHGLREGSPAFVAKVRAGEVYTY
type: DOMAIN
name: Herpes_teg_USP
description: Herpesvirus large tegument protein, USP domain
Protein sequence:
MKYYFSSIGIVGHPRYDSALNTHKLLHSWLVNKGYNVIIENKVAHKLRLKNINFDSLANIGKKCDLAIVVGGDGNMLCAARILSCYNIKIIGINRGNLGFLTDLNPDTAFQQLYNVLSGEYFIEKRFLLEVKIVKENGTALINTAINEVVLHAGHVAHMIDFEVYINNEFAFSQRSDGLIISTPTGSTGYSLSAGGPILVSSLEAMVLIPMFPHTLSSRPLVINSTSIVYLKFKKHIHSELKISCDSQVILPLNSKDNIFVKKSKKFLCLLHPKNYNYFNVLSSKLNWSKRF

Annotated regions:
Protein sequence:
MTRFIFITGGVVSSLGKGIAAAALGALLQSRGYKIRIRKLDPYLNVDPGTLSPYQHGEVFVTDDGAETDLDLGHYERFTGVNAKQSDNATTGRIYSNVIAKERRGDYLGATVQVIPHITDAIKDIILRDTDGYDFVLTEIGGTVGDIESQPFLEAIRQLRNEIGAERSLCLHLTLLPYIPSAGELKTKPTQHSVRELQHVGLQPQILLCRCDRPIPESERQKIANFCNVSPSAVIAARDVDTIYACPSAYHEQGLDNEVLKYFHLESKSEPNLEKWDRFVSVLRNESKKVTIKIAGKYTSLLDSYKSLSEALLHAGVANNRKVEIIWVNAEDLTSQEECQKQLSDADGILIPGGFGERGTEGKIESIRFARENKIPLFGICLGMQLSVIECARSLAGIKDASSTEFDQQKTPMIVELEQAYHGKENAPQNLGGTMRLGAYPAQLQKDSHIAKIYGSEKISERHRHRWEVNSDYKDQLEKTGLIFSGMSPDGCLAEAVEYPDHPWFIAVQYHPELKSKPFDPHPLFVSFIQAAAKHHLEKNAG

Annotated regions:
phrase: VTIKIAGKYTSLLDSYKSLSEALLHAGVANNRKVEIIWVNAEDLTSQEECQKQLSDADGILIPGGFGERGTEGKIESIRFARENKIPLFGICLGMQLSVIECARSLAGIKDASSTEFDQQKTPMIVELEQAYHGKENAPQNLGGTMRLGAYPAQLQKDSHIAKIYGSEKISERHRHRWEVNSDYKDQLEKTGLIFSGMSPDGCLAEAVEYPDHPWFIAVQYHPELKSKPFDPHPLFVSF
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain

phrase: RFIFITGGVVSSLGKGIAAAALGALLQSRGYKIRIRKLDPYLNVDPGTLSPYQHGEVFVTDDGAETDLDLGHYERFTGVNAKQSDNATTGRIYSNVIAKERRGDYLGATVQVIPHITDAIKDIILRDTDGYDFVLTEIGGTVGDIESQPFLEAIRQLRNEIGAERSLCLHLTLLPYIPSAGELKTKPTQHSVRELQHVGLQPQILLCRCDRPIPESERQKIANFCNVSPSAVIAARDVDTIYACPSAYHEQGLDNEVL
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: RFIFITGGVVSSLGKGIAAAALGALLQSRGYKIRIRKLDPYLNVDPGTLSPYQHGEVFVTDDGAETDLDLGHYERFTGVNAKQSDNATTGRIYSNVIAKERRGDYLGATVQVIPHITDAIKDIILRDTDGYDFVLTEIGGTVGDIESQPFLEAIRQLRNEIGAERSLCLHLTLLPYIPSAGELKTKPTQHSVRELQHVGLQPQILLCRCDRPIPESERQKIANFCNVSPSAVIAARDVDTIYACPSAYHEQGLDNEVLKYFH
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: LLDSYKSLSEALLHAGVANNRKVEIIWVNAEDLTSQEECQKQLSDADGILIPGGFGERGTEGKIESIRFARENKIPLFGICLGMQLSVIECARSLAGIKDASSTEFDQQKTPMIVELEQAYHGKENAPQNLGGTMRLGAYPAQLQKDSHIAKIYGSEKISERHRHRWEVNSDYKDQLEKTGLIFSGMSPDGCLAEAVEYPDHPWFIAVQYHPELKSKPFDPHPLFVSFI
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase
Protein sequence:
MQYNGKSQQSINKINCIIEKNQSNSIINKFQVASPYDDYDDRLNFLETIEKNSGFYNVLCELFLPNGYPDSVTTDYFGYQFWDSIQALCSTITGTLATRAILKGYGVGDSSATVASATTQWLIRDGMGMIGRIVFAWRKGTDLDCNSKKWRYTADILNNIGMAFEMISPLFSSQLFLPLSCIGLIAKSICGVAGGCTKASLTQHFAKRDNLADVSAKDGSQETAVNLVGMLLSVIVSSFINDNTSLIVTWLVFLFFTSLHLFCNYRAVSAVQLKSINRYRAYLIYDYFIHNQGSIPSPSEISKLENILFSIKELDIRVGVSLCNIYKVQQKQQKLNNQFLQQKLNNITKTKNVNNNNNNNNNNNNNNNNNNNNKNNNINNINNNINNNINNNINNNINNKNNNNNNNNNNNNNNNNNNNNNNNNNKNSLEIIKKIKKSKSFIIWKKHSQRGNKILEKDFTLLIALLNGSTTRDMIESYFYAVEYFHLSSVQIPPTINISGTFFKRLEEKGWDLDRALLNSEGWTFGI

Annotated regions:
phrase: KNSGFYNVLCELFLPNGYPDSVTTDYFGYQFWDSIQALCSTITGTLATRAILKGYGVGDSSATVASATTQWLIRDGMGMIGRIVFAWRKGTDLDCNSKKWRYTADILNNIGMAFEMISPLFSSQLFLPLSCIGLIAKSICGVAGGCTKASLTQHFAKRDNLADVSAKDGSQETAVNLVGMLLSVIVSSFINDNTSLIVTWLVFLFFTSLHLFCNYRAVSAVQLKSINRYRAYLIYDYFIH
type: DOMAIN
name: UVB_sens_RUS_dom
description: Protein root UVB sensitive/RUS domain
Protein sequence:
MVRNKYTLTTAGKSPSKKSRTGSISKQHDASDDGETGNLDGGNGGGSPVGDGTDNTSAKRCDGGSVHKQNLYIISFPVIFVFNVLRSLLYQLFIVFRYVYNFTTKVVYKPVRKECGLEIVINTDHGNHHHHHHRHSSHSIHTSTPHHSQEQQQHQQHQQQHQQQQQQQQQHQYSLLQQEQQTNGGDSQQQTAHPLQCSHSGVLVNNEGREMSIQRSASGSQVGPGDPLLAKQKHHHRRAFEYISKALKIDEDNEDQKELAIELYRKGILELERGIAVECWGGRGEVWERAQRLHDKMQTNLSMARDRLQFLELMLEAKRLELIESKQNEKNHKHTPLRRQNTFTLSTEDRCDNTFVHKPSSTSAASNASPMPAASCSSSSSSKNGAFASREQTSVRKFKLPMFTPSSLNVDSAPVSPSTGGAPYRDAKSKLYNPENKIISFNENCATTQHSSATTLSARGATKTITGAIDAPHTLNIKQANNEVGYKRPGNLGVMNKSQTLPRSMGGTRTTPTGGGTGGITGGGLGNGATYGSNTAGGGAGMPKIVPKPAATPPAIRRQFSIPGSSPIRKASNGYGSKNMPPPRSKTPLAGQQPQSQQQQPQQPQISVKGVEPKLVQIIMDEIVEGGAKVQWQDIAGQEVAKQALQEMVILPSVRPELFTGLRTPAKGLLLFGPPGNGKTLLARAVATECSATFFSISAATLTSKYVGDGEKLVRALFAVARELQPSIIFIDEVDSVLSERSSNEHEATRRLKTEFLVQFDGLPANSE

Annotated regions:
phrase: LLLFGPPGNGKTLLARAVATECSATFFSISAATLTSKYVGDGEKLVRALFAVARELQPSIIFIDEVDSVLSERSSNEHEATRRLKTEFLVQFDGL
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: PAKGLLLFGPPGNGKTLLARAVATECSATFFSISAATLTSKYVGDGEKLVRALFAVARELQPSIIFIDEVDSVLSERSSNEHEATRRLKTEFLVQFD
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: QKHHHRRAFEYISKALKIDEDNEDQKELAIELYRKGILELERGIAVECWGGRGEVWERAQRLHDKMQTNLSMARDRLQ
type: DOMAIN
name: MIT_dom
description: MIT domain
Protein sequence:
MPNSIFKKQLSPIKPGDPIDYKDVELLKKFITERGKILPRRMTGLTSKQQRDLTLAVKRARIVALLPFVNPEG

Annotated regions:
phrase: IDYKDVELLKKFITERGKILPRR
type: CONSERVED_SITE
name: Ribosomal_bS18_CS
description: Small ribosomal subunit protein bS18, conserved site
Protein sequence:
MKALLDLFKQVTQKEEFDSIKIGLASPEKIRSWSYGEVKKPETINYRTFKPERDGLFCAKIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTLSRIRRERMGHIELASPVAHIWFLKSLPSRLGLVLDITLRDIERVLYFEAYIVTDPGMTPLTRGQLLTEDDYLNKTEEFGDDFSAAMGAEGIRALLNSMDILSEIESLRLEIQTTGSETKIKKAAKRLKVLEAFNKSGMKPEWMILTVLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELRAPEIIIRNEKRMLQESVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPQLKLHQCGLPKKMALELFKPFIFNKLEVMGVASTIKAAKREVENENPIVWDILEEVIREHPVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMECRTLMLSTNNVLSPANGDPIIVPSQDIVLGLYYMTREKVGAQGEGMVFSDVSEITRAYESKALELNARITVRIKEKKKSCGHGEDPIETITRFETTVGRALISEILPAGLPFALVNKTLKKKEISKLINASFRLCGLRETVIFADKLMYSGFSYATRGGISICLDDLVTPSQKTGIIQAAEQEIHEIANQYISGLVTQGERYNKVVDIWARAGDQVAKAMMDQLSVEPVKDQETGEIRTDKNGQAVTQESFNSIYMMADSGARGSAAQIRQLSGMRGLMAKPDGSIIET

Annotated regions:
phrase: EWMILTVLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELRAPEIIIRNEKRMLQESVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPQLKLHQCGLPKKMALELFKPFIFNKLEVMGVASTIKAAKREVENENPIVWDILEEVIREHPVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMECRTLMLSTNNVLSPANGDPIIVPSQDIVLGLYYM
type: DOMAIN
name: RNA_pol_N
description: RNA polymerase, N-terminal

phrase: NVLSPANGDPIIVPSQDIVLGLYYMTREKVGAQGEGMVFSDVSEITRAYESKALELNARITVRIKEKKKSCGHGEDPIETITRFETTVGRALISEILPAGLPFALVNKTLKKKEISKLINASFRLCGLRETVIFADKLMYSGFSYATRGGISICLDD
type: DOMAIN
name: RNA_pol_Rpb1_3
description: RNA polymerase Rpb1, domain 3

phrase: GKRVDYSGRSVIVVGPQLKLHQCGLPKKMALELFKPFIFNKLEVMGVASTI
type: DOMAIN
name: RNA_pol_asu
description: RNA polymerase, alpha subunit

phrase: STIKAAKREVENENPIVWDILEEVIREHPVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMECRTLM
type: DOMAIN
name: RNA_pol_asu
description: RNA polymerase, alpha subunit

phrase: EEFDSIKIGLASPEKIRSWSYGEVKKPETINYRTFKPERDGLFCAKIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTLSRIRRERMGHIELASPVAHIWFLKSLPSRLGLVLDITLRDIERVLYFEAYIVTDPGMTPLTRGQLLTEDDYLNKTEEFGDDFSAAMGAEGIRALLNSMDILSEIESLRLEIQTTGSETKIKKAAKRLKVLEAFNKSGMKPEWMILTVLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELRAPEIIIRNEKRMLQESVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQN
type: DOMAIN
name: RNA_pol_Rpb1_1
description: RNA polymerase Rpb1, domain 1

phrase: TQGERYNKVVDIWARAGDQVAKAMMDQLSVEPVKDQETGEIRTDKNGQAVTQESFNSIYMMADSGARGSAAQIRQLSGMRGLMAKPD
type: DOMAIN
name: RNA_pol_Rpb1_4
description: RNA polymerase Rpb1, domain 4
Protein sequence:
MKLAVVGATGLVGSEMLKVLEERNFHFDELYLVASERSVGTQIKYKGKDYSVIGMQTAVDIKPDIAIFSAGGSTSLEWAPKFEAAGSIVIDNSSAWRMDPSKKLVVPEINGSTLRIDDRIIANPNCSTIQMVMVLAPLHKKYGIKRVVVSTYQSVTGTGKAAVDQMMAERAGKSEPKVYPHPIDMNVLPHIDVFLDNGYTKEEMKMVKETTKIMGDDSIKVTATTVRVPTVGGHSEAVNVEFVKDFDLAEVRDLMSHTPGVVLQDEPSKNIYPMPIWAHNKDEVFVGRIRRDESQANTINMWIVADNLRKGAATNAVQIAEYLVEANLVF

Annotated regions:
phrase: LAPLHKKYGIKRVVVSTYQSVTGTGKAAVDQMMAERAGKSEPKVYPHPIDMNVLPHIDVFLDNGYTKEEMKMVKETTKIMGDDSIKVTATTVRVPTVGGHSEAVNVEFVKDFDLAEVRDLMSHTPGVVLQDEPSKNIYPMPIWAHNKDEVFVGRIRRDESQANTINMWIVADNLR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: KLAVVGATGLVGSEMLKVLEERNFHFDELYLVASERSVGTQIKYKGKDYSVIGMQTAVDIKPDIAIFSAGGSTSLEWAPKFEAAGSIVIDNSSAWRMDPSKKLVVPEINGSTLRI
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: KLAVVGATGLVGSEMLKVLEERNFHFDELYLVASERSVGTQIKYKGKDYSVIGMQTAVDIKPDIAIFSAGGSTSLEWAPKFEAAGSIVIDNSSAWRMDPSKKLVVPEINGST
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MSALAGKRILLIIGGGIAAYKCLDLIRRLKERGAGVTPVMTRAAAEFVTPLSVGALAANRVYSDLFDREDEQDVGHIRLAREHGLVVVAPATADRMARLAGGLAEDLAGAILLATRAPVLMAPAMNPAMWEHPATRRNLARLGEDGVRFVGPGTGEMAEKGEAGVGRMAEPLEIVAAAEAILSPKERPLAGLSAVVTSGPTHEPIDPVRYIANRSSGRQGHAIAAALRDAGADVTLVSGPVTLPDPQGVSVRHVETAAEMLSAVEASLPADIAVFVAAVADWRVAAESLRKIKKTAEGPPSLALAENPDILATIGHHAKRPGLVVGFAAETDDLLANARNKLERKGADAILANDVSPEGGVMGGSDNTIRLVTADGVEEWPKLAKDAAAGRLAGWIAARLGRSVRK

Annotated regions:
phrase: KRILLIIGGGIAAYKCLDLIRRLKERGAGVTPVMTRAAAEFVTPLSVGALAANRVYSDLFDREDEQDVGHIRLAREHGLVVVAPATADRMARLAGGLAEDLAGAILLATRAPVLMAPAMNPAMWEHPATRRNLARLGEDGVRFVGPGTGEMAEKGEAGVGRMAEPLEIV
type: DOMAIN
name: Flavoprotein
description: Flavoprotein

phrase: LAGLSAVVTSGPTHEPIDPVRYIANRSSGRQGHAIAAALRDAGADVTLVSGPVTLPDPQGVSVRHVETAAEMLSAVEASLPADIAVFVAAVADWRVAAESLRKIKKTAEGPPSLALAENPDILATIGHHAKRPGLVVGFAAETDDLLANARNKLERKGADAILANDVSPEGGVMGGSDNTIR
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal
Protein sequence:
MNFEGLDPSLAEYAPALHPALDPVLDPHLNPSLLQNVELDAEGVPLEGIAVPDSVHIVEGMYSELHTAVSEVGVPVSVSHFDLHEEMLWVGNHGGHATSFFGPTLERYSSFQVNSSDDIRQIQSLENGILFLTKTNLKYMSRGGLIIFDYLMDDSEDMHSLLLTDSSTLLVGGLQNHVVEIDLNTVQETQKYTVEVPGITIMRQSNRFFFCGHTSGKVSLRDLRTFVVEHEFDAYSGSLSDFDVHGNLLVTCGFSSRMNGLACDRFLKVYDLRMMRATTPLQVHIDPFFLRFIPTYTSRLAIISQTGQCQFCEPTGLANPADIFHVNTVGPLIMTFDVSASKQALAFGDSEGCVHLWADSPEVTFNAYSRETDFALPCMVDTLPHLDWNQDLVPLSLIPVPLTSETLLSDWPAANSAPAPRRAPPVDPEILRTMKKVGFIGYAPNPRTKLRNQIPYRLKEADNEFDSFNQVPESPIGREEEPHLYMVAKKYRKVTIKYSKLGLEDFDFKHYNKTLFAGLEPHIPNAYCNCMIQVLYFLEPVRCLVQNHLCQKEFCLGCELGLLFHMLDLSRGDPCQGSNFLRAFRTIPEASALGLILADSDEATGKVNLGRLIQSWNRFILTQLHQETQEQEGPQAYRGAGSSSFGSSRDSVIGQLFSCEMENCSMCRCGKETVRVSSTLLFTLSYPESTEKPVKDYEFAQILKRSICLEQNTQAWCENCEKYQPTVQTRNIRCLPDVLVINCEVNSSKEADFWKTQAEYAFQRAMMR

Annotated regions:
phrase: AGLEPHIPNAYCNCMIQVLYFLEPVRCLVQNHLCQKEFCLGCELGLLFHMLDLSRGDPCQGSNFLRAFRTIPEASALGLILADSDEATGKVNLGRLIQSWNRFILTQLHQETQEQEGPQAYRGAGSSSFGSSRDSVIGQLFSCEMENCSMCRCGKETVRVSSTLLFTLSYPESTEKPVKDYEFAQILKRSICLEQNTQAWCENCEKYQPTVQTRNIRCLPDVLVINCEVNSSKEADFWKT
type: DOMAIN
name: PAN2_UCH_dom
description: PAN2, UCH domain

phrase: AGLEPHIPNAYCNCMIQVLYFLEPVRCLVQNHLCQKEFCLGCELGLLFHMLDLSRGDPCQGSNFLRAFRTIPEASALGLILADSDEATGKVNLGRLIQSWNRFILTQLHQETQEQEGPQAYRGAGSSSFGSSRDSVIGQLFSCEMENCSMCRCGKETVRVSSTLLFTLSYPESTEKPVKDYEFAQILKRSICLEQNTQAWCENCEKYQPTVQTRNIRCLPDVLVINCEVNSSKEADFWKTQAEYAFQRAMM
type: DOMAIN
name: USP_dom
description: Ubiquitin specific protease domain

phrase: VEGMYSELHTAVSEVGVPVSVSHFDLHEEMLWVGNHGGHATSFFGPTLERYSSFQVNSSDDIRQIQSLENGILFLTKTNLKYMSRGGLIIFDYLMDDSEDMHSLLLTDSSTLLVGGLQNHVVEIDLNTVQETQKYTVEVPGITIMRQSNRFFFCGHTSGKVSLRDLRTFVVEHEFDAYSGSLSDFDVHGNLLVTCGFSSRMNGLACDRFLKVYDLRMMRATTPLQVHIDPFFLRFIPTYTSRLAIISQTGQCQFCEPTGLANPADIFHVNTVGPLIMTFDVSASKQALAFGDSEGCVHLW
type: DOMAIN
name: PAN2_N
description: PAN2-PAN3 deadenylation complex catalytic subunit PAN2, N-terminal
Protein sequence:
MITIKKGLDLPIAGTPSQVINDGKSITKVALLGEEYVGMRPTMHARVGDEVKKGQVLFADKKNPGVVFTSPASGKVIEVNRGAKRVLQSVVIEVAGNEQITFNSYEANQLVSLDRETVKTQLVESGAWTALRTRPFSKVPAVDSETQAIFVTAMDTNPLAAEPELIINEQSDAFVAGLDLLSTLTNGKVYVCKKGTSLPRSAQSNVEEHVFDGPHPAGLAGTHMHYLYPVNAQNVAWSINYQDVIAFGKLFLTGEIYSERVVSLAGPVVNNPRLVRTQIGASLEELTDSELMPGEVRVISGSVLTGTEATGPHAFLGRYHQQVSVLREGRDKELFGWAMPGKNKFSVTRSFLGHLFKGQLFNMTTTTNGSDRSMVPIGNYERVMPLDMEPTLLLRDLCAGDIDSAQALGALELDEEDVALCTFVCPGKYEYGQLLRECLDTIEKEG

Annotated regions:
phrase: VVSLAGPVVNNPRLVRTQIGASLEELTDSELMPGEVRVISGSVLTGTEA
type: DOMAIN
name: NqrA_C_domain
description: Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain

phrase: ITIKKGLDLPIAGTPSQVINDGKSITKVALLGEEYVGMRPTMHARVGDEVKKGQVLFADKKNPGVVFTSPASGKVIEVNRGAKRVLQSVVIE
type: DOMAIN
name: NQRA_N
description: NqrA, N-terminal barrel-sandwich hybrid domain

phrase: LDRETVKTQLVESGAWTALRTRPFSKVPAVDSETQAIFVTAMDTNPLAAEPELIINEQSDAFVAGLDLLSTLTNGKVYVCKKGTSLPRSAQSNVEEHVFDGPHPAGLAGTHMHYLYPVNAQNVAWSINYQDVIAFGKLFLTGE
type: DOMAIN
name: NQRA_2nd
description: NqrA, second alpha/beta domain
Protein sequence:
MSASSNADGAAPLTNRVQVPAGARLVLATHNAGKLAELRQILTPLVPGLVPESVISAASLQAPEPVEDGLSFADNALLKARALARATGLPAVADDSGLCVDVLGGAPGIFSARWSGRHGDDTANLQLLLDQLGDVADPHRGARFTCAAVLVQPASGGQAEQVTTIERSMEGRLVHAPQGEGGFGYDPIFVPVQEDAPGGRGRTTAQMTPEEKHAISHRGQAFRALAPVLADVLAG

Annotated regions:
Protein sequence:
MRVKGMKRNYQNWWKWGLMIFGILMICSAAENLWVTVYYGVPVWKEAETTLFCASDAKSYVTEKHNVWATHACVPTDPNPQEIVLENVTENFNMWKNSMVEQMHQDIISLWDQSLKPCVMLTPLCVTLKCSNISRKTNNSGTIETEIQNEIKNCSFNMTTELRDKHQKVHALFYRLDIVPINDNETNLNNSEYRLINCNTSAIKQACPKVTFEPVPIHYCAPAGFAILKCRNKKFNGTGTCNNVSSVQCTHGIKPVVSTQLLLNGSLAEENIIIRSENITDNTKVIIVQLVEPVMINCTRPNNNTRTGVRIGPGQTFYATGDIIGDIRQAQCNINGTKWNETLEKVAGELRKHFNNKTIVFRPSSGGDLEVTTHTFNCGGEFFYCNTSSLFNSTWDENNTKSAQGPNGTANITIPCKIRQIVRMWQRVGQAMYAPPIPGVINCISNITGLILIRDGGNESATNETFRPIGGDMKNNWRSELYKYKVVKIEPLGVAPTRARRRVVQREKRAVGMGALFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLKAIEAQQHLLKLTVWGIKQLQARVLAIERYLKDQQLLGLWGCSGKLICTTNVPWNSSWSNKSQQEIWDNMTWLEWDREISNYTQIIYNLIEKSQNQQEKNEQDLLALDSWASLWSWFDISRWLWYIRIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQTLIPNPRGPDRPEGTEEEGGEQDKDRSIRLVSGFLALAWDDLRNLCLFSYHR

Annotated regions:
phrase: LWVTVYYGVPVWKEAETTLFCASDAKSYVTEKHNVWATHACVPTDPNPQEIVLENVTENFNMWKNSMVEQMHQDIISLWDQSLKPCVMLTPLCVTLKCSNISRKTNNSGTIETEIQNEIKNCSFNMTTELRDKHQKVHALFYRLDIVPINDNETNLNNSEYRLINCNTSAIKQACPKVTFEPVPIHYCAPAGFAILKCRNKKFNGTGTCNNVSSVQCTHGIKPVVSTQLLLNGSLAEENIIIRSENITDNTKVIIVQLVEPVMINCTRPNNNTRTGVRIGPGQTFYATGDIIGDIRQAQCNINGTKWNETLEKVAGELRKHFNNKTIVFRPSSGGDLEVTTHTFNCGGEFFYCNTSSLFNSTWDENNTKSAQGPNGTANITIPCKIRQIVRMWQRVGQAMYAPPIPGVINCISNITGLILIRDGGNESATNETFRPIGGDMKNNWRSELYKYKVVKIEPLGVAPTRARRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: VQARQLLSGIVQQQSNLLKAIEAQQHLLKLTVWGIKQLQARVLAIERYLKDQQLLGLWGCSGKLICTTNVPWNSSWSNKSQQEIWDNMTWLEWDREISNYTQIIYNLIEKSQNQQEKNEQDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASITLTVQARQLLSGIVQQQSNLLKAIEAQQHLLKLTVWGIKQLQARVLAIERYLKDQQLLGLWGCSGKLICTTNVPWNSSWSNKSQQEIWDNMTWLEWDREISNYTQIIYNLIEKSQNQQEKNEQDLLALDSWASLWSWFDISRWLWYIRIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MTLNEIANWILAAKLEGDGNVQITGLNNDSRSVQPGTLFFCLPGYKVDGHDFAAAAASNGAAALVVERKLDVAIPQLIVKDSRLAMAIISDRYYDHPSQKLRLIGVTGTNGKTTTTYLIERILSDAGQSAGVIGTIETRYAGNTLPMSGTTPGALELQQYLAAMAEAGVDSCAMEVSSHALDQGRTWGCRFRIGVFTNLTQDHLDYHGTMEKYAAAKSLLFSRLGNTYSEAEAERSYAVLNADDSASDLFANAAAVEILTYGIDREADVRASDIRITSRGTTFRLETFRGGADISIRMVGKFNVYNALAATSVALLEGISIEAIKQSLEALPGVPGRVESVDAGQPYAVIVDYAHTPDGLENVLRTVKEFVEGRIICVFGCGGDRDRTKRPIMGRIAAKYADICVITSDNPRSENPHAILLDVEEGLKADGIPSNRYLLIEDRRHAIEKAVEMASPGDVVLIAGKGHETYQIIGPKTFDFDDRLVAEEAIRGTKS

Annotated regions:
phrase: GRVESVDAGQPYAVIVDYAHTPDGLENVLRTVKEFVEGRIICVFGCGGDRDRTKRPIMGRIAAKYADICVITSDNPRSENPHAILLDVEEGLKADGIPSNRYLLIEDRRHAIEKAVEMASPGDVVLIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: ITGLNNDSRSVQPGTLFFCLPGYKVDGHDFAAAAASNGAAALVVERKLDV
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: IGVTGTNGKTTTTYLIERILSDAG
type: CONSERVED_SITE
name: Folylpolyglutamate_synth_CS
description: Folylpolyglutamate synthetase, conserved site

phrase: VTGTNGKTTTTYLIERILSDAGQSAGVIGTIETRYAGNTLPMSGTTPGALELQQYLAAMAEAGVDSCAMEVSSHALDQGRTWGCRFRIGVFTNLTQDHLDYHGTMEKYAAAKSLLFSRLGNTYSEAEAERSYAVLNADDSASDLFANAAAVEILTYGIDREADVRASDIRITSRGTTFRLETFRGGADISIRMVGKFNVYNALAATS
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central
Protein sequence:
MTQPTQSSTWQQHLTRAWTHRGWLAWLLWPISLLYGVLVKLRRSLYQAGIFKSERVPVPVIVVGNVVAGGAGKTPVVMMVVRHLQARGLQVGVISRGYGRQTHDCREVCSDSAITDVGDEPALIQRSTAAPVFVASRRVDAARALLARYAQTQVIVCDDGLQHLGLQRDLEICVFDERGVGNGFLLPAGPLREPWPRAVDLVLHTGTPPAFAGFSAQRTLSRYALMADGSQQALGDLAGPTCLCNKPLLALAAIAKPENFFTMLRAQGLTLARTLALPDHYGFDSWSHNDYEGYTLICTEKDAVKLWPLEPDALAVPLVVTPEPAFLAQLDARLDRLLPTDPSPTLSLAHGHTTT

Annotated regions:
Protein sequence:
MSEKFYRATYLNVNLDAILANYQNFNQLHANKTVISVIKANGYGLGSVKIAQHLMRHGATFFAVATLDEAIELRMHGVDAKLLVLGVVPTEDIEKAIQHRVALTVPSKAWLKETIKQIPDDNQKNLWLHVKLDTGMGRIGMKDIDEYKEVVDLINKRDHLVFEGVFTHFASADEPGSSMNEQYTLFKEMVNQVEKPIYIHCQNSAGSLLMDGQFCNAIRLGISLYGYYPSEYVKDNVKVHLRPSAQLVSETVQVKTLKVGETVSYGRTFIADEEMTIAILPIGYADGYLRSMQGAFVNVNGSQCEVIGRICMDQMIVKVPSHVKTGEKVILMDNHVDSPQSAEAVANKQGTINYEVLCNLSRRLPRIYYYDNNEEVTNELLK

Annotated regions:
phrase: SVIKANGYGL
type: BINDING_SITE
name: Ala_racemase_pyridoxalP-BS
description: Alanine racemase, pyridoxal-phosphate attachment site

phrase: SAQLVSETVQVKTLKVGETVSYGRTFIADEEMTIAILPIGYADGYLRSMQGAFVNVNGSQCEVIGRICMDQMIVKVPSHVKTGEKVILMDNHVDSPQSAEAVANKQGTINYEVLCNLSRRLPRIY
type: DOMAIN
name: Ala_racemase_C
description: Alanine racemase, C-terminal

phrase: VNLDAILANYQNFNQLHANKTVISVIKANGYGLGSVKIAQHLMRHGATFFAVATLDEAIELRMHGVDAKLLVLGVVPTEDIEKAIQHRVALTVPSKAWLKETIKQIPDDNQKNLWLHVKLDTGMGRIGMKDIDEYKEVVDLINKRDHLVFEGVFTHFASADEPGSSMNEQYTLFKEMVNQVEKPIYIHCQNSAGSLLMDGQFCNAIRLGISLYGYY
type: DOMAIN
name: Ala_racemase_N
description: Alanine racemase, N-terminal

phrase: QLVSETVQVKTLKVGETVSYGRTFIADEEMTIAILPIGYADGYLRSMQGAFVNVNGSQCEVIGRICMDQMIVKVPSHVKTGEKVILMDNHVDSPQSAEAVANKQGTINYEVLCNLSRRLPRI
type: DOMAIN
name: Ala_racemase_C
description: Alanine racemase, C-terminal
Protein sequence:
MEFSNTREFARSMDKEDPLATYKDEFIFPEVNNKKVIYFTGNSLGLQPKSAKKYVDEVMDDWANLAVEGHFYAEKPWWDYHERFSEKLAKVVGAKPPEITVMNTLTVNLHLLMVSFYRPDAKRYKIICEEKAFPSDQYMIASQVKFHGFNPEDAVVEVKKRAGENHFRTEDILKKIEEIGDECALVLFGGVNYYSGQVLDMETITRAGHEIGAKVGWDLAHAVGNIELKLHEWNVDFAAWCSYKYMNSGPGNASGCFINEKYHELKEIPRFEGWWGHSKERRFLMEPEFQPEPDAHAWQISNAPILALAPYLASLDMFEKVGMPALIEKRNKIVAYLEFVLHQIDEEVESDFEIITPSNQNERGTQLSVFLHGEGKELFNYLMKNGVIIDWREPNVIRLAPAPFYCSYEDMYEFGQILKRGILKI

Annotated regions:
Protein sequence:
MATENCTVVTEFILLGLTDRAELKMMLFVLFLVIYAVTLLGNLGMILLIRITPKLHTPMYFFLSCLSFVDACYSSVIAPKMLISFLVVTETISFSACIMQHLFFGVLVTTEGFLLSVMAYDRYVAVVNPLLYTVSMSKQKCIMMVTGSVIGGTINSLTHTISLSKLSFCGPNIVGHFFCDIPSLLILSCSDTSMNEFLLLIFSGVIAIGTLLIVFISYLFIALAILRIRSASGRQKAFSTCASHLTAVTIFYGTLSFNYIQPSSQYSVEQEKVVSVFYTLVIPMLNPMIYSLRNKEVKEAAKRAIEMKSFSC

Annotated regions:
phrase: GNLGMILLIRITPKLHTPMYFFLSCLSFVDACYSSVIAPKMLISFLVVTETISFSACIMQHLFFGVLVTTEGFLLSVMAYDRYVAVVNPLLYTVSMSKQKCIMMVTGSVIGGTINSLTHTISLSKLSFCGPNIVGHFFCDIPSLLILSCSDTSMNEFLLLIFSGVIAIGTLLIVFISYLFIALAILRIRSASGRQKAFSTCASHLTAVTIFYGTLSFNYIQPSSQYSVEQEKVVSVFYTLVIPMLNPMI
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM