nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MKQRLKVKYLNTVIPELKEKFVYNNLNQIPSIKKITINRGLGQSHQNSKSFDYFLDELSVITGQRGIVTYSKKAIASFKLRKKSPVGVSVTLRGEKMYAFLDRLINLALPRVRDFRGLDKKSFDGCGNFSLGLNEQLMFPEIDYDKINSVCGMDISIVINSGNNEESLFLLRELGVPFSELKVS

Annotated regions:
phrase: LSVITGQRGIVTYSKK
type: CONSERVED_SITE
name: Ribosomal_uL5_CS
description: Large ribosomal subunit protein uL5, conserved site

phrase: PVGVSVTLRGEKMYAFLDRLINLALPRVRDFRGLDKKSFDGCGNFSLGLNEQLMFPEIDYDKINSVCGMDISIVINSGNNEESLFLLRELGVP
type: DOMAIN
name: Ribosomal_uL5_C
description: Large ribosomal subunit protein uL5, C-terminal

phrase: NLNQIPSIKKITINRGLGQSHQNSKSFDYFLDELSVITGQRGIVTYSKKAIASFKL
type: DOMAIN
name: Ribosomal_uL5_N
description: Large ribosomal subunit protein uL5, N-terminal
Protein sequence:
MDITKIKDPSFLKALDDEALMQLSDDIRKFLIEKCAITGGHIGANLGVVELTIALHKYFDSPQDKIIFDVGHQAYIHKILTGRSEQFDTLRQYKGLSGFPKLSESEHDVWEAGHSSTSLSAAMGMAKARDIKGEKYHVIPVIGDGALTGGMALEALNHIGHDKTNMTIILNDNEMSIAPNVGAMHNMFGRLRTNQNYNRAKVDIDGFLSKLPGGYKLRESADRIKDSLKYLVVSGVFFEELGIKYIGPVDGHNFNDLKEAIETSKRIDGPVMIHVITKKGKGYHPAESDKIGTWHGLGPYKLETGEVIKGNSNAPAWSKVFSDTVLSFAKEDKEVVAITPAMPVGSKLTRFQSELPKQFFDVGIAEQHAVTMAAGLAMNGMKPYVAIYSTFLQRAYDQVLHDVDRQNLHVVFGVDRSGLVGADGETHQGVFDIPFLSHLPNMTIMMPKDEQEAYQMLYNAFYQYDGPIAIRYPRGNGLGVEVKPTNERLVKGKWDIIKQGEKVALISFGPTLSILEDAAVELVKEGINVEVVNARFIKPMDFEYLKQIANRNMKVICIEESMLIGGLGQMIQSYYSDEKLDVEVKRIGINDEYIEHGDVDLLLNDIGITVANIVNQVKQMENDQDEKN

Annotated regions:
phrase: RKFLIEKCAITGGHIGANL
type: CONSERVED_SITE
name: Transketolase_CS
description: Transketolase conserved site

phrase: PAWSKVFSDTVLSFAKEDKEVVAITPAMPVGSKLTRFQSELPKQFFDVGIAEQHAVTMAAGLAMNGMKPYVAIYSTFLQRAYDQVLHDVDRQNLHVVFGVDRSGLVGADGETHQGVFDIPFLSHLPNMTIMMPKDEQEAYQMLYNAFYQYDGPIAIRYPRGNGLG
type: DOMAIN
name: Transketolase-like_Pyr-bd
description: Transketolase-like, pyrimidine-binding domain

phrase: GADGETHQGVFDIPFL
type: BINDING_SITE
name: Transketolase_BS
description: Transketolase binding site

phrase: PAWSKVFSDTVLSFAKEDKEVVAITPAMPVGSKLTRFQSELPKQFFDVGIAEQHAVTMAAGLAMNGMKPYVAIYSTFLQRAYDQVLHDVDRQNLHVVFGVDRSGLVGADGETHQGVFDIPFLSHLPNMTIMMPKDEQEAYQMLYNAFYQYDGPIAIRYPRG
type: DOMAIN
name: Transketolase-like_Pyr-bd
description: Transketolase-like, pyrimidine-binding domain

phrase: GKWDIIKQGEKVALISFGPTLSILEDAAVELVKEGINVEVVNARFIKPMDFEYLKQIANRNMKVICIEESMLIGGLGQMIQSYYSDEKLDVEVKRIGINDEYIEHGDVDLLLNDIGITVAN
type: DOMAIN
name: Transketolase_C
description: Transketolase, C-terminal domain
Protein sequence:
MNPLIIKLGGVLLDSEEALERLFTALVAYRQEHQRPLVIVHGGGCLVDDLMKKLSLPVVKKNGLRVTPADQIDIITGALAGSANKTLLSWAKKHDINAVGLCLGDGGSTTVTQLDEALGFVGKAEAGSPALLNTLLSAGYLPVVSSIGITAQGDLMNVNADQAATALAQTLGADLILLSDVSGILDGKGQRIAEMTAEKAEQLIAQGIITDGMIVKVNAALDAARALGRPVDIASWRHAEQLPALFNGVAIGTRILA

Annotated regions:
phrase: LIIKLGGVLLDSEEALERLFTALVAYRQEHQRPLVIVHGGGCLVDDLMKKLSLPVVKKNGLRVTPADQIDIITGALAGSANKTLLSWAKKHDINAVGLCLGDGGSTTVTQLDEALGFVGKAEAGSPALLNTLLSAGYLPVVSSIGITAQGDLMNVNADQAATALAQTLGADLILLSDVSGILDGKGQRIAEMTAEKAEQLIAQGIITDGMIVKVNAALDAARALGRPVDI
type: DOMAIN
name: Asp/Glu/Uridylate_kinase
description: Aspartate/glutamate/uridylate kinase
Protein sequence:
MRLILLGPPGAGKGTQAKRVIEEFDIPHISTGDIFRKNIKEKTELGQKVEGLLAQGKLVPDELTIEIVWDRLDQEDCKNGFLLDGFPRTIPQAEALDEGLAKRGLKLDRVLNIDVDKDSLVKRLSGRRVCPSCGASYHIDNNPTKVDGICDACQTPVIQREDDKEETVLDRIKVYDSQTKPLVDFYNKQDLVFTVDGTLPIDEITNKLVTELKKG

Annotated regions:
phrase: FLLDGFPRTIP
type: CONSERVED_SITE
name: Adenylat_kinase_CS
description: Adenylate kinase, conserved site

phrase: RRVCPSCGASYHIDNNPTKVDGICDACQTPVIQRE
type: DOMAIN
name: Adenylate_kinase_lid-dom
description: Adenylate kinase, active site lid domain
Protein sequence:
METVLSFSAIAVAIIVGLCAVGTAIGFAVLGGKFLEGAARQPEMAPMLQVKMFIIAGLLDAVPMIGIVIALLFTFANPFVGQLAG

Annotated regions:
phrase: ARQPEMAPMLQVKMFIIAGLL
type: BINDING_SITE
name: ATP_synth_F0_csu_DDCD_BS
description: ATP synthase, F0 complex, subunit C, DCCD-binding site

phrase: IAVAIIVGLCAVGTAIGFAVLGGKFLEGAARQPEMAPMLQVKMFIIAGLLDAVPMIGIVIALL
type: DOMAIN
name: ATPase_proteolipid_c-like_dom
description: V-ATPase proteolipid subunit C-like domain
Protein sequence:
MTNIRKTHPLTKIINNSFIDLPAPSNISAWWNFGSLLGICLILQILTGLFLAMHYSSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYMFPETWNIGIILLLAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIVSALAAVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGALLLILTLMVLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAFSILILAVVPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFITIGQLASILYFTILLVFMPVISIIENNLLKW

Annotated regions:
phrase: PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAFSILILAVVPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFITIGQLASILY
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: GIPSDSDKIPFHPYYTIKDILGALLLILTLMVLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAFSILILAVVPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFITIGQLASILYFTILLVFMPVISIIENNLLK
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: IDLPAPSNISAWWNFGSLLGICLILQILTGLFLAMHYSSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYMFPETWNIGIILLLAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIVSALAAVHLLFLHET
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: PLTKIINNSFIDLPAPSNISAWWNFGSLLGICLILQILTGLFLAMHYSSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYMFPETWNIGIILLLAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIVSALAAVHLLFLHETGS
type: DOMAIN
name: Cytochrome_b_N_euk/bac
description: Cytochrome b/b6, N-terminal domain, eukaryotic/bacterial

phrase: NPSGIPSDSDKIPFHPYYTIKDILGALLLILTLMVLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAFSILILAVVPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFITIGQL
type: DOMAIN
name: Cytochrome_b_C_euk/bac
description: Cytochrome b/b6, C-terminal domain, eukaryotic/bacterial

phrase: MTNIRKTHPLTKIINNSFIDLPAPSNISAWWNFGSLLGICLILQILTGLFLAMHYSSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYMFPETWNIGIILLLAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIVSALAAVHLLFLHETGSNNP
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain
Protein sequence:
MNNQGFVPASDYPTAVSYPTQGQSYNTQEEQPAYPQRFSTSQGMYAAEYGNANMMNTSENEPNNLAHSQPFRQSPSTQRNLPNQSFDFASNGAWNGSGSVKYSSPMMPSSRIPFQQEKEAAMQQQQQQQQQQQLYQRQMQSREALLSQQIPPNQIGINAHPAVRQTPQPAPSPNTPSGNANQLTPAYAASFDKFMVSLISFMEKRGTPIKSYPQINNTPINLMMLYALVMRAGGSRQVSAHNFWPKISASLGFPSPDAISLLIQYYNSYLLPYEEAWLAAQQQQKSLQQAKANHSANVQSRPKNYPQKPVQTTPEAVHANGSMHGSLHSKSPSPAFTANRFSPAAPTTVSSERNAPPYPSAPTRPTPPTVQTSSSAAPVDSAEPVAYQPIKKPIDPMLGYPLNVAATYRLDESLLRLQMPSIVDLGTVNIQALCMSLQSTLEKEITYAMNVLLILTNDQKWMFPLSECQDVVDALIDVATQCLDNLLSVLPNEDLMEIADKRPSYRQLLYNCCVEISQFSREDFSNSLSENKTKDSINAIDVHNSEQNLLAVFVIFRNLSHFEANQNVLVQNPDFFPLLIRVVKSLNFHATSLLRSSRNTLDLHKDVLIVLCQLSQNFILPNVDVARHVLLFILSFSPFNRKKSKTILNDTLPTSIPSYTPATHPYAGPAINAYAKLLAKDANNKTNFQAIFDNNPKFLDSLFLLLASVVPKFNRHCLKICERRLPLLQQSFFCLAATVSYVKQSEQAANWCNIGEGFFVSMLRLLIL

Annotated regions:
phrase: AASFDKFMVSLISFMEKRGTPIKSYPQINNTPINLMMLYALVMRAGGSRQVSAHNFWPKISASLGFPSPDAISLLIQYYNSYLLPYEEAW
type: DOMAIN
name: ARID_dom
description: ARID DNA-binding domain

phrase: DKFMVSLISFMEKRGTPIKSYPQINNTPINLMMLYALVMRAGGSRQVSAHNFWPKISASLGFPSPDAISLLIQYYNSYLLPY
type: DOMAIN
name: ARID_dom
description: ARID DNA-binding domain

phrase: ASFDKFMVSLISFMEKRGTPIKSYPQINNTPINLMMLYALVMRAGGSRQVSAHNFWPKISASLGFPSPDAISLLIQYYNSYLLPYEEAWL
type: DOMAIN
name: ARID_dom
description: ARID DNA-binding domain
Protein sequence:
MSTNPKPAFRRILLKLSGEALMGEEGFGIDPKVLDRMAQEVKELVELGIQVGVVIGGGNLFRGEGLAKAGMNRVVGDHMGMLATVMNGLAMRDALHRAYVNARLMSAIPLKGVCDDYTWTEAISLLKSGRVVIFAAGTGNPFCTTDSAACLRGIEIEAEVVLKGTKVDGVYSADPMKNPEAVKYDTLSFAEVLESELKVMDLAAFTMARDHNMPILVFNMNKPGALRRVIMGEKEGTIISSKQPA

Annotated regions:
phrase: RILLKLSGEALMGEEGFGIDPKVLDRMAQEVKELVELGIQVGVVIGGGNLFRGEGLAKAGMNRVVGDHMGMLATVMNGLAMRDALHRAYVNARLMSAIPLKGVCDDYTWTEAISLLKSGRVVIFAAGTGNPFCTTDSAACLRGIEIEAEVVLKGTKVDGVYSADPMKNPEAVKYDTLSFAEVLESELKVMDLAAFTMARDHNMPILVF
type: DOMAIN
name: Asp/Glu/Uridylate_kinase
description: Aspartate/glutamate/uridylate kinase
Protein sequence:
MNLQHHFLIAMPALQDPIFRRSVVYICEHNTNGAMGIIVNKPLENLKIEGILEKLKITPEPRDESIRLDKPVMLGGPLAEDRGFILHTPPSNFASSIRISDNTVMTTSRDVLETLGTDKQPSDVLVALGYASWEKGQLEQEILDNAWLTAPADLNILFKTPIADRWRDAAKLIGVDILTMPGVAGHA

Annotated regions:
Protein sequence:
MVRVVATGTFDIIHPGHIRFLEEAKKLGDELIVIVAREKNVRHKPKPIIPEEQRVRVVSALKPVDKAILGDEHDIFKPIMELKPDIIALGYDQHFDEKKLEEELRKRGLNTRVVRIKAKEECEYCSSTKIIKRIVDVVKSRLQEYEEFFRSRGML

Annotated regions:
phrase: RVVATGTFDIIHPGHIRFLEEAKKLGDELIVIVAREKNVRHKPKPIIPEEQRVRVVSALKPVD
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: ATGTFDIIHPGHIRFLEEAKKLGDELIVIVAREKNVRHKPKPIIPEEQRVRVVSALKPVDKAILGDEHDIFKPIMELKPDIIALGYDQHFDEKKLEEELRKRGLNTRVVRIKAKEECEYCSSTKIIK
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain
Protein sequence:
MLIFPLINDTSRKIIHIDMDAFFAAVEERDNPALKGKPVVIGKDPRETGGRGVVSTCNYEARKYGIHSAMSSKEAYERCPKAIFISGNYEKYRTVGDQIRRIFKRYTDLVEPMSIDEAYLDVTDNKLGIKSAVKIAKLIQHDIWKEVGLTCSAGVSYNKFLAKLASDFEKPHGLTLVLKEDALCFLAKLPIEKFHGVGKKSVEKLHDMGIYTGQDLLAVPEMTLIDHFGRFGFDLYRKARGISNSPVKSDRIRKSIGSERTYAKLLYQETDIKAEISKNAKRVAALLQDHKKLGKTIVLKVRYADFTTLTKRVTLPELTRNAAQIEQVAGDIFDSLSENPAGIRLLGVTMTNLEDKVADISLDL

Annotated regions:
phrase: IIHIDMDAFFAAVEERDNPALKGKPVVIGKDPRETGGRGVVSTCNYEARKYGIHSAMSSKEAYERCPKAIFISGNYEKYRTVGDQIRRIFKRYTDLVEPMSIDEAYLDVTDNKLGIKSAVKIAKLIQHDIWKEVGLTCSAGVSYNKFLAKLASDFEKPHGLTLVLKEDALCFLAKLPIEKFHGV
type: DOMAIN
name: UmuC
description: UmuC domain

phrase: RKSIGSERTYAKLLYQETDIKAEISKNAKRVAALLQDHKKLGKTIVLKVRYADFTTLTKRVTLPELTRNAAQIEQVAGDIFDSLSENPAGIRLLGVTMTNLED
type: DOMAIN
name: DNA_pol_Y-fam_little_finger
description: DNA polymerase, Y-family, little finger domain

phrase: IDMDAFFAAVEERDNPALKGKPVVIGKDPRETGGRGVVSTCNYEARKYGIHSAMSSKEAYERCPKAIFISGNYEKYRTVGDQIRRIFKRYTDLVEPMSIDEAYLDVTDNKLGIKSAVKIAKLIQHDIWKEVGLTCSAGVSYNKFLAKLAS
type: DOMAIN
name: UmuC
description: UmuC domain

phrase: EDALCFLAKLPIEKFHGVGKKSVEKLHDMG
type: CONSERVED_SITE
name: PolY_HhH_motif
description: DNA polymerase type-Y, HhH motif
Protein sequence:
MSFLSIFTFFSVLISVATTVRFDLTNVTCKGLHGPHCGTYVMEVVGQNGTFLGQSTFVGADVLTESAGDAWARYLGQETRFLPKLTTIASNETKNFSPLIFTTNINTCNPQSIGDAMVPFANTVTGEIEYNSWADTADNASFITGLANQLFNSTDYGVQVASCYPNFASVILSTPAVNIFGKDDTLPDYCTAIQLKAVCPPEAGFD

Annotated regions:
Protein sequence:
MARILLGVSGGIAAYKALDLIRLAASAGHSVRVIQTDNSQRFVGAASFAAITGAPVLTSEWERDPARGAFPDQQLPEHDPISHLELVRNADCFVIAPASANTIAKLASGLADNLLTSAALAASCPLIVAPAMNHQMWENAATQENVELLRQRAVTIVDPEVGSLASRNEWGNGRLAQASTILAAIEQIVPAGPRPWDGRKVLVTAGGTREPIDAVRFVGNRSSGRMGFALAQAAAVRGADVTVIAANVDLPRDERITYIDVESAAELEKAAREQFTKCNLLLMAAAVADFTSAEPAEGKLKKAGRAELSLTLKPTTDVLAALSEMRTDGQTLVGFAAEHGAEAVELGRVKLAAKGLDALVINDVSGVDIGFESTTNEVTIVTAGGDVHVPKADKLEIANSILDAVDELHSAGASVSG

Annotated regions:
phrase: RILLGVSGGIAAYKALDLIRLAASAGHSVRVIQTDNSQRFVGAASFAAITGAPVLTSEWERDPARGAFPDQQLPEHDPISHLELVRNADCFVIAPASANTIAKLASGLADNLLTSAALAASCPLIVAPAMNHQMWENAATQENVELLRQRAVTIVDPEVGSLASRNEWGNGRLA
type: DOMAIN
name: Flavoprotein
description: Flavoprotein

phrase: DGRKVLVTAGGTREPIDAVRFVGNRSSGRMGFALAQAAAVRGADVTVIAANVDLPRDERITYIDVESAAELEKAAREQFTKCNLLLMAAAVADFTSAEPAEGKLKKAGRAELSLTLKPTTDVLAALSEMRTDGQTLVGFAAEHGAEAVELGRVKLAAKGLDALVINDVSGVDIGFESTTNEVTI
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal
Protein sequence:
MDYLPIFCRLDNKPVLLVGGGEVAERKARLLLDAGARLTVVSPALDPELAALATSGTIDWLAAEFEPAHLTGKWLVVAATDRREVNALVYQSANQAGIFANVVDDPKRSSFIMPSIIDRSPLMVAISSGGKAPVLARLLREKLEALLPQHLGAVAAFAGGLRARVKARFASMGERRQFWERLLSADRLGQALARGDKASANQLADTLFAEETGAKGEVILVGAGPGDPGLLTLHALRHMQQADLVVYDQLVSDEVMALVRRDARRIFVGKQAGNHCVPQEGINQLLLEEASKGQRVVRLKGGDPFIFGRGGEELETLVGSGVGFQVVPGITAASGCAAYAGIPLTHRDHAQSVRFVTAHGKGGTQDLDWPLLARDQQTLVFYMGLSSCATIRQKLTAHGKAGTTPVALIERGTQLNQRVIRGTLDQLPELAVGVESPALIMVGSVVTLADKLAWFGQTNHGVQAAALA

Annotated regions:
phrase: HLGAVAAFAGGLRARVKARFASMGERRQFWERLLSADRLGQALARGDKASANQLADT
type: DOMAIN
name: Sirohaem_synthase_dimer_dom
description: Sirohaem synthase, dimerisation domain

phrase: RSPLMVAISSGGKAPVLARLLREKLE
type: DOMAIN
name: Sirohaem_synthase_central
description: Siroheme synthase, central domain

phrase: VGAGPGDPGLLTLH
type: CONSERVED_SITE
name: Uropor_MeTrfase_CS
description: Uroporphiryn-III C-methyltransferase, conserved site

phrase: LPIFCRLDNKPVLLVGGGEVAERKARLLLDAGARLTVVSPALDPELAALATSGTIDWLAAEFEPAHLTGKWLVVAATDRREVNALVYQSANQAGIFANVVDDPKRSSFIMPSIIDRSPLMVAISSGGKAPVLARLLREKLEALLPQHLGAVAAFAGGLRARVKARFASMGERRQFWERLLSADRLGQALARGDKASANQL
type: DOMAIN
name: Sirohaem_synthase_N
description: Sirohaem synthase, N-terminal

phrase: VGAGPGDPGLLTLHALRHMQQADLVVYDQLVSDEVMALVRRDARRIFVGKQAGNHCVPQEGINQLLLEEASKGQRVVRLKGGDPFIFGRGGEELETLVGSGVGFQVVPGITAASGCAAYAGIPLTHRDHAQSVRFVTAHGKGGTQDLDWPLLARDQQTLVFYMGLSSCATIRQKLTAHGKAGTTPVALIERGTQLNQRVIRGTLDQLPELAVGVESPALIMVGSV
type: DOMAIN
name: CobA/CysG_C
description: Uroporphyrin-III C-methyltransferase

phrase: VILVGAGPGDPGLLTLHALRHMQQADLVVYDQLVSDEVMALVRRDARRIFVGKQAGNHCVPQEGINQLLLEEASKGQRVVRLKGGDPFIFGRGGEELETLVGSGVGFQVVPGITAASGCAAYAGIPLTHRDHAQSVRFVTAHGKGGTQDLDWPLLARDQQTLVFYMGLSSCATIRQKLTAHGKAGTTPVALIERGTQLNQRVIRGTLDQ
type: DOMAIN
name: 4pyrrol_Mease
description: Tetrapyrrole methylase

phrase: GEVILVGAGPGDPGLLTLHALRHMQQADLVVYDQLVSDEVMALVRRDARRIFVGKQAGNHCVPQEGINQLLLEEASKGQRVVRLKGGDPFIFGRGGEELETLVGSGVGFQVVPGITAASGCAAYAGIPLTHRDHAQSVRFVTAHGKGGTQDLDWPLLARDQQTLVFYMGLSSCATIRQKLTAHGKAGTTPVALIERGTQLNQRVIRGTLDQLPELAVGVESPALIMVGSVVT
type: DOMAIN
name: CobA/CysG_C
description: Uroporphyrin-III C-methyltransferase

phrase: VVRLKGGDPFIFGRGGEELETLVGSGVGFQVVP
type: CONSERVED_SITE
name: Uropor_MeTrfase_CS
description: Uroporphiryn-III C-methyltransferase, conserved site
Protein sequence:
RFKKIRRLGALPGLTSKRPRSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYGLTELQLLKYVHIAGKAKGSTGQILLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRCKPRDIITTKNKQRSKALIQNFIASSPHQEELPNHLTIDPFQYKGLVNQIIDSKWIGLKINELLVVEYYSRQT

Annotated regions:
phrase: MRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRCKPRDIITTKNKQRSKALIQNFI
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: KKIRRLGALPGLTSKRPRSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYGLTELQLLKYVHIAGKAKGSTGQILLQLL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: LEMRLDNILFRLGMASTIPGARQL
type: CONSERVED_SITE
name: Ribosomal_uS4_CS
description: Small ribosomal subunit protein uS4, conserved site

phrase: MRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRCKPRDI
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: RFKKIRRLGALPGLTSKRPRSGSDLKNQLRSGKRSQYRIRLEEKQKLRFHYGLTELQLLKYVHIAGKAKGSTGQILLQLL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal
Protein sequence:
MRQHVNPLSKNFFEIDPIPPLNQVFENPKLPLHLDIGCASGEFLFELSLKNKNWNYIGIEIREKLVLNANLKMKSRENKNLYFSFGNANNIFNQTNNKSIINLITSISFNFPDPWFKKKHHKRRVIQPKLLNLLSNSMKKGSLIFIKTDVRDLFDHMELTISESIKFKKIPYQDVDFCESFNPNRIQTNREKYVILNQLKIYESIYKKI

Annotated regions:
Protein sequence:
MNINFNNINLIISAVKKAQYPDTGLTEVALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFYNIDEQLIFVDVPGYGYAKVSKVQREKFGKMIEEYITQRENLKLVIQLVDLRHQPTEDDVLMYNYLKHFDIPTLVICTKEDKIAKGKVQKHIKRIKDKLELESGDNIISYSSIKNSKQQEIWNFIETYI

Annotated regions:
phrase: EVALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFYNIDEQLIFVDVPGYGYAKVSKVQREKFGKMIEEYITQRENLKLVIQLVDLRHQPTEDDVLMYNYLKHFDIPTLVICT
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: GLTEVALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFYNIDEQLIFVDVPGYGYAKVSKVQREKFGKMIEEYITQRENLKLVIQLVDLRHQPTEDDVLMYNYLKHFDIPTLVICTKEDKIAKGKVQKHIKRIKDKLELESGDNIISYSSIKNSKQQEIWNFIETY
type: DOMAIN
name: G_ENGB_dom
description: EngB-type guanine nucleotide-binding (G) domain

phrase: EVALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFYNIDEQLIFVDVPGYGYAKVSKVQREKFGKMIEEYITQRENLKLVIQLVDLRHQPTEDDVLMYNYLKHFDIPTLVICTKEDKIAKGKVQKHIKRIKDKLEL
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: EVALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFYNIDEQLIFVDVPGYGYAKVSKVQREKFGKMIEEYITQRENLKLVIQLVDLRHQPTEDDVLMYNYLKHFDIPTLVICTKEDKIAKGKVQKHIKRIKDKLELESGDNIISYSSIKNSKQQEIWNFIETY
type: DOMAIN
name: G_ENGB_dom
description: EngB-type guanine nucleotide-binding (G) domain
Protein sequence:
MNTTTPMGMLQQPRPFFMIFFVELWERFGYYGVQGVLAVFFVKQLGFSQEQAFVTFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGALVLAIGYFMTGLSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKAPRLDGAFTLFYMSINIGSLIALSLAPVIADRFGYSVTYNLCGAGLIIALLVYIACRGMVKDIGSEPDFRPMSFSKLLYVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFRQAFKLDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVLASPILAGIYTHLGSKGKDLSMPMKFTLGMFMCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMVAALVPQHLMGFILGISFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMLLMVPWLKRMIAAPESH

Annotated regions:
phrase: FTLFYMSINIGS
type: CONSERVED_SITE
name: PTR2_symporter_CS
description: PTR2 family proton/oligopeptide symporter, conserved site

phrase: GGYVGDHLLGTKRTIVLGALVLAI
type: CONSERVED_SITE
name: PTR2_symporter_CS
description: PTR2 family proton/oligopeptide symporter, conserved site
Protein sequence:
MRAGRAHALCWLLLLQAAPWARGGRPCDAEDFGHGSAVCVCSAAYCDELQPLLLPSAGGYVRYESSKAGKRLQRSHGTFRHGAAHADVLLTLDPTQRFQTVKGFGGSITDSAAINILSLPKAAQTRLLRSYFSDRGIEYNLVRVPMASTDFSVRLYTYADVEGDFGMEHFNLSEEDTGMKVRGGGGGG

Annotated regions:
phrase: VKGFGGSITDSAAINILSLPKAAQTRLLRSYFSDRGIEYNLVRVPMASTDFSVRLYTYADVEGDFGMEHFNLSEEDTGMK
type: DOMAIN
name: Glyco_hydro_30_TIM-barrel
description: Glycosyl hydrolase family 30, TIM-barrel domain
Protein sequence:
MADFFTTPGGIAVLILAQVLAVIGFVMVSLLFLVYGDRKIWAAVQMRRGPNVVGTFGLLQTVADALKYVVKEVVVPAGADKTVFMLAPMTSFVLALLAWAVIPFNDGWVLSDINVAILFVFAISSLEVYGVIMGGWASNSKYPFLGSLRSAAQMISYEVSLGLIIIGVIISTGSMNFGGIVAAQDGPYGFFSWYWLPHFPMVFLFFISCLAETNRPPFDLPEAESELVAGYQVEYSSTPFLLFMAGEYIAIFLMCALTSLLFFGGWLSPIPGLPDGVFWMIAKMAFFFFLFAMVKAITPRYRYDQLMRLGWKVFLPFSLVWVVFVAFAAKFEWFWGAYARWGMGG

Annotated regions:
phrase: GLLQTVADALKYVVK
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_su1_CS
description: NADH:ubiquinone oxidoreductase, subunit 1, conserved site

phrase: PFDLPEAESELVA
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_su1_CS
description: NADH:ubiquinone oxidoreductase, subunit 1, conserved site
Protein sequence:
MSIYAVIGTQWGDEGKGKIIDFLSSKIDYVVRFNGGNNAGHTIVVNNKKFIFNLLPSGVLQGAKCILGPGVVIDPLILIKELEALKHNNIKTEIFISDKAHIIMPYHIKLDELNEQKKGVYKIGTTKRGIGPCYADKINRTGIRAVDLLDIKIFERKLKINLDEKNEIIEKIYNHKPFNYDDILSKYKKCIAILQYAITNTEEILNQAINSGKIILIEGAQGTMLDIEHGTFPFVTSSNTLITATTGCGIPISKIKEKIGIVKAFSSRVGSGPFVTEILGPIGDKIREKGQEYGSTTNRPRRIGWLDLLTIKKSISLNELNHLALTKLDILNNIEDLKICTAYEFKGKIYDYIPTSCEILENVKPVYKVFKGFKQNIRNISHYEDLPIEAKEYIEFIEREVGVQISILSLGAEREKTIFRNQKWINI

Annotated regions:
phrase: QWGDEGK
type: BINDING_SITE
name: Adenylosuccin_syn_GTP-bd
description: Adenylosuccinate synthase, GTP-binding site

phrase: GIGPCYADKIN
type: ACTIVE_SITE
name: Adenylosuccin_syn_Lys_AS
description: Adenylosuccinate synthase, active site
Protein sequence:
MTRSDLAAAFDDGPALVSYVVAGDPTPAATAEYIDALVDGGTDVIELGLPFSEPVAEGTTIQNAIKRALDAGMTPDAYLDLVARIDADVPVVCMTYYNLLFQYGDRAGPAAFVSAAAEAGVSGFVVPDLPVDESGPLREACRAHGLDLVFVVAPTTTADRRERMLDLTTGFVYVQGRVGTTGAREEVSAATPDALAALQHTDIPKAVGFGVSSGEQAREITASGADGVIVGSAYVDTVADGVADDDPPSVVADRLRDLAAELKAGAARGVPEPEHK

Annotated regions:
phrase: IELGLPFSEPVAE
type: ACTIVE_SITE
name: Trp_synthase_alpha_AS
description: Tryptophan synthase, alpha chain, active site
Protein sequence:
MSAVLDTPVAIRRTAMDLLARREHGRVELTRKLRQRGASDELIEPELDRLAEEGLLSEARYLESFIRYRSGSGYGPARIREELCQRGLARADIDQALRESEVNWGERMRDVWQRKFAGQRPQDPRSRAQQTRFLAYRGFPMDMIGRLLSGRDLDDY

Annotated regions:
phrase: SEARYLESFIRYRSGSGYGPARIREELCQRGLARADIDQA
type: DOMAIN
name: RecX_HTH_2nd
description: RecX, second three-helical domain

phrase: RTAMDLLARREHGRVELTRKLRQRGASDELIEPELDR
type: DOMAIN
name: RecX_HTH_1st
description: RecX, first three-helical domain

phrase: ERMRDVWQRKFAGQRPQDPRSRAQQTRFLAYRGFPMDMIGR
type: DOMAIN
name: RecX_HTH_3rd
description: RecX, third three-helical domain
Protein sequence:
MIIPAIDLIDGKVVRLYQGDYGQKTEYSADPQGRFDDYVAQGATQLHLVDLDGAKDSTKRQLTVIRKLLANTKAPVQIGGGVRTEQDVKDLLDAGANRVVIGSTAVKDPVTVAGWVEKYGADKIVLALDVNIDAEGNRKIAVAGWQEDSGVTIEALLAHYLPVGLKHVLCTDISRDGTLQGSNVALYRDLAAQFPQINWQASGGIGGIADIEALKGSGVGGVILGRSLLEGKFTVKEAIACWQDA

Annotated regions:
Protein sequence:
MQREYDYIIIGAGSAGNVLAARLTEDPGVTVLLLEAGGPDYRVDFRTQMPAALAFPLQGRRYNWAYETEPEPYMDNRRMECGRGKGLGGSSLINGMCYIRGNALDFDHWAKRPGLEDWSYRDVLPYFRKAETRDIGANDYHGGDGPVSVATPKNDNNVLFHAMVEAGVQAGYPRTGDLNGYQQEGFGPMDRTVTPRGRRASTARGYLDMAKPRDGLHIVTHATTDRILFAGKRAIGVHYLVGNSSEGIDAHARREVLVCAGAIASPQLLQRSGVGAPDLLRALDVQLVHDLPGVGQNLQDHLEVYIQYACTKPVSLYPALQWWNQPAIGAQWLFAGTGTGASNQFEAGGFIRTREEFDWPNIQYHFLPVAINYNGSNAVKEHGFQAHVGSMRTPSRGRVHAKSRDPRQHPSILFNYQSTDQDWQEFRDAIRITREIIAQPALDAYRGREISPSADCKTDAELDAFVRSRAETAYHPSCSCAMGTDAMAVVDGQGRVHGMEGLRVIDASIMPRIITGNLNATTIMIAEKIADRVRGRTPLPRSTADYYIAGDAPVRG

Annotated regions:
phrase: SRGRVHAKSRDPRQHPSILFNYQSTDQDWQEFRDAIRITREIIAQPALDAYRGREISPSADCKTDAELDAFVRSRAETAYHPSCSCAMGTDAMAVVDGQGRVHGMEGLRVIDASIMPRIITGNLNATTIMI
type: DOMAIN
name: GMC_OxRtase_C
description: Glucose-methanol-choline oxidoreductase, C-terminal

phrase: GAIASPQLLQRSGV
type: DOMAIN
name: GMC_OxRdtase_N
description: Glucose-methanol-choline oxidoreductase, N-terminal

phrase: GKGLGGSSLINGMCYIRGNALDF
type: DOMAIN
name: GMC_OxRdtase_N
description: Glucose-methanol-choline oxidoreductase, N-terminal

phrase: YDYIIIGAGSAGNVLAARLTEDPGVTVLLLEAGGPDYRVDFRTQMPAALAFPLQGRRYNWAYETEPEPYMDNRRMECGRGKGLGGSSLINGMCYIRGNALDFDHWAKRPGLEDWSYRDVLPYFRKAETRDIGANDYHGGDGPVSVATPKNDNNVLFHAMVEAGVQAGYPRTGDLNGYQQEGFGPMDRTVTPRGRRASTARGYLDMAKPRDGLHIVTHATTDRILFAGKRAIGVHYLVGNSSEGIDAHARREVLVCAGAIASPQLLQRSGVGAPDLLRALDVQLVHDLPGVGQNLQDH
type: DOMAIN
name: GMC_OxRdtase_N
description: Glucose-methanol-choline oxidoreductase, N-terminal
Protein sequence:
MKQSRTKRVLAIGELKFATNTLKRLSEKYHFEFIVPDPHDRSKTIEKIHEAASKSTFDACFWLFRNAAISPFTEEMLGPLLPTCKLFVTGAAGYNNVDVDWATRNGVYVANTPNGPTEGTANMNLMLFMCTLRGAREAEQSLRLGKWRQNLSLTDDPYGKRVGIIGMGAIGKSFAQKILPLGCEIVYHNRNRLEAEEEKRLGASFVSFDELLSSSDVISINCPLTPATHDLISTKEFEKMKDGVYIINTARGAIINEDAFIKAIKSGKVARAGLDVFLNEPTPNKFWLECDKVTIQPHCGVYTNFTVAKTEECVLASIETFLDTGIPTNPVNGPFGMNGC

Annotated regions:
phrase: VGIIGMGAIGKSFAQKILPLGCEIVYH
type: CONSERVED_SITE
name: D-isomer_DH_CS1
description: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1

phrase: LMLFMCTLRGAREAEQSLRLGKWRQNLSLTDDPYGKRVGIIGMGAIGKSFAQKILPLGCEIVYHNRNRLEAEEEKRLGASFVSFDELLSSSDVISINCPLTPATHDLISTKEFEKMKDGVYIINTARGAIINEDAFIKAIKSGKVARAGLDVFLNEPTPNKFWLECDKVTIQPHC
type: DOMAIN
name: D-isomer_DH_NAD-bd
description: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain

phrase: MKDGVYIINTARGAII
type: CONSERVED_SITE
name: D-isomer_DH_CS
description: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site

phrase: LLSSSDVISINCPLTPATHDLI
type: CONSERVED_SITE
name: D-isomer_DH_CS
description: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site

phrase: ATNTLKRLSEKYHFEFIVPDPHDRSKTIEKIHEAASKSTFDACFWLFRNAAISPFTEEMLGPLLPTCKLFVTGAAGYNNVDVDWATRNGVYVANTPNGPTEGTANMNLMLFMCTLRGAREAEQSLRLGKWRQNLSLTDDPYGKRVGIIGMGAIGKSFAQKILPLGCEIVYHNRNRLEAEEEKRLGASFVSFDELLSSSDVISINCPLTPATHDLISTKEFEKMKDGVYIINTARGAIINEDAFIKAIKSGKVARAGLDVFLNEPTPNKFWLECDKVTIQPHCGVYTNFTVAKTEECVLASIETFLDTGIPTNPV
type: DOMAIN
name: D-isomer_2_OHA_DH_cat_dom
description: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
Protein sequence:
MSIPNNLRYSEEHEWVKTEGNAVVIGITHFAQGELGDIVFVELPEVGATIQADEPFGSVESVKTVSELYAPVSGKVVAVNEELSDQPELVNESPYEGAWMVKVELSDASQVEKLLTAEKYAEMTNQD

Annotated regions:
phrase: AVVIGITHFAQGELGDIVFVELPEVGATIQADEPFGSVESVKTVSELYAPVSGKVVAVNEELSDQPELVNESPYEGAWMVKV
type: DOMAIN
name: Biotin_lipoyl
description: Biotin/lipoyl attachment

phrase: GATIQADEPFGSVESVKTVSELYAPVSGK
type: BINDING_SITE
name: 2-oxoA_DH_lipoyl-BS
description: 2-oxo acid dehydrogenase, lipoyl-binding site
Protein sequence:
MTETHTTEVRGDSGRAVAERVASRVLDVPDFPKPGVMFKDLMPLFADGDTFREVIDGIVRHYGRDSFDAVVGIEARGFVVAAAIAYAAGVGVVPVRKAGKLPRVAYSASYALEYGEATLEVHQDAFTAGHRVLVVDDVLATGGTAQATLDLVERAGGTVAGFTVLLELGFLGGRERLAPRAVHALLTV

Annotated regions:
phrase: EVIDGIVRHYGRDSFDAVVGIEARGFVVAAAIAYAAGVGVVPVRKAGKLPRVAYSASYALEYGEATLEVHQDAFTAGHRVLVVDDVLATGGTAQATLDLVERAGGTVAGFTVL
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: FDAVVGIEARGFVVAAAIAYAAGVGVVPVRKAGKLPRVAYSASYALEYGEATLEVHQDAFTAGHRVLVVDDVLATGGTAQATLDLVERAGGTVAGFTVLLELGFLGGRERLAPRAVHALL
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain
Protein sequence:
MASTKEIRSKIKSVQNTRKITKAMEMVAASKMRRAQERMRNARPYAEKIREIVANLSKANPEFRPAYMEAREVKKVGTILVTTDKGLCGGLNTNVLRFITNQVRDLQEKNIEIVYTAIGSKGLQFLNRSKAKLISQTIQIGDTPHMDVLIGAIIAQLEAFERGEIDAVYLAYNRFVNAMKQEPVLEKLLPLEPAALVPEDKAGNSWDYIYEPDAESILNGLLKRYVEAMIYQAVTENMASEQSARMVSMKAASDNAKNVIGELQLEYNKTRQAAITKELSEIVGGAAAV

Annotated regions:
phrase: ITKELSEIVGGAA
type: CONSERVED_SITE
name: ATP_synth_F1_gsu_CS
description: ATP synthase, F1 complex, gamma subunit conserved site