nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MKTWLMGLYEFFQAYKTVWTEIWKIRHQLDTPDREKDENEFLPAHLELIETPVSKKPRLIAYLIMLFLFLALVISIVSHVEIVATATGKLAFSGRSKEIKPIENALVKEIFVEDGQFVEKDQLLLHLTALGADADQQKTKSSLSLTKLERYRYEILLEAVAADRLPLIELTKDEFKHATEEDKTRIRYLITEQFEAWQKQKYQKELALQRREAEKQTVLANIRKYEGSSRVENERLKDLKKLFNSKSTSKHDVLTQENRHIEAVNELAVYKSRLNEVESDLRQAKEEIHLITQLFRADILEKLKQNVEAEKQLSLELEKNEQRQIASVIRAPVSYVQQLKTHTVGGVVTTAETLMVIAPEDDVLEVTALIQNKDIGFIEVGQDAVIKVETFPYTRYGYLMGKVKNITLEAIEHPQLGLVFNSIISIDRKTLSGKDGKEIELGSGMSVTAEIKTGERSVISYLLSPLEESVSESLRER

Annotated regions:
phrase: LGSGMSVTAEIKTGERSVISYL
type: CONSERVED_SITE
name: Secretion_HlyD_CS
description: Secretion protein HlyD, conserved site
Protein sequence:
MSEQKLAVNEYLKTDSDYLRGTIQEGLDTQVTGSFSDGDQQLIKFHGFYQQDDRDLRNERKEQKLEPLYSFMLRARVPGGICTPAQWLDVDKISSTLTTSNSIRLTTRQTFQYHGIPKRNLKTLIQGLDKAALDSIAACGDVNRNVMCNPNPVESKLHAQAYAVAKELSDHLLPHTRAYAEIWLDEEKLVGETVEPVYGNTYLPRKFKMAVSVPPDNDVDVYTNDLGFIAIAEDGQLVGFNLVAGGGMGSTHGEVETFPRLADDFGFIKTADVIKFAEAVMTVQRDWGNRVVRKRARLKYTIVDHGFDAFKAEVENRAGVKFAPKRDVVIGDRGDRYGWVEGIDSKWHLTLFIESGRIKDLPGQTLQTGLREIAKIHKGDFRMTSNQNMIIAGVAAEDKAEIEGLARKHGLMGQVLTGTRGHSIACVALPTCPLAMAEAERYFPEFIDHIDALQAKHGISDQSIVVRMTGCPNGCARPFAAEIGLVGKAPGRYNLYLGANFEGTRLNKMHKENIQEAEILAELDTLFGRYATERDAGETFGNFTVRIGVVKAVNDAAKDFHG

Annotated regions:
phrase: GHSIACVALPTCPLAMAE
type: BINDING_SITE
name: NO2/SO3_Rdtase_FeS/sirohaem_BS
description: Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site

phrase: TGCPNGCARPFAAEIGLV
type: BINDING_SITE
name: NO2/SO3_Rdtase_FeS/sirohaem_BS
description: Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site

phrase: LSDHLLPHTRAYAEIWLDEEKLVGETVEPVYGNTYLPRKFKMAVSVPPDNDVDVYTNDLGFIAIAEDGQLVGFNLVAGGGMGSTHGEVETFPRLADDFGFIKTADVIKFAEAVMTVQRDWGNRVVRKRARLKYTIVDHGFDAFKAEVENRAGV
type: DOMAIN
name: NO2/SO3_Rdtase_4Fe4S_dom
description: Nitrite/sulphite reductase 4Fe-4S domain

phrase: SFMLRARVPGGICTPAQWLDVDKISSTLTTSNSIRLTTRQTFQYHGIPKRNLKTLIQGLD
type: DOMAIN
name: NiRdtase/SiRdtase_haem-b_fer
description: Nitrite/Sulfite reductase ferredoxin-like domain

phrase: KWHLTLFIESGRIKDLPGQTLQTGLREIAKIHKGDFRMTSNQNMIIAGVAAEDKAEI
type: DOMAIN
name: NiRdtase/SiRdtase_haem-b_fer
description: Nitrite/Sulfite reductase ferredoxin-like domain

phrase: TGCPNGCARPFAAEIG
type: BINDING_SITE
name: NO2/SO3_Rdtase_FeS/sirohaem_BS
description: Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site
Protein sequence:
MIIVTGGAGFIGSNIIKALNDKGITDILVVDNLKDGTKFANLVDLNIADYMDKEDFLIQLMAGEEFGEIEAIFHEGACSSTTEWDGKYMMDNNYQYSKEVLHYCLEHEIPFLYASSAATYGGRTSDFIESREYEQPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGETPKLFEGSDGFKRDFVYVGDVAAVNLWFWENGVSGIFNLGTGRAESFQAVADAALAFHKKDSLEYIPFPEKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVAEYMAWLNRN

Annotated regions:
phrase: IIVTGGAGFIGSNIIKALNDKGITDILVVDNLKDGTKFANLVDLNIADYMDKEDFLIQLMAGEEFGEIEAIFHEGACSSTTEWDGKYMMDNNYQYSKEVLHYCLEHEIPFLYASSAATYGGRTSDFIESREYEQPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGETPKLFEGSDGFKRDFVYVGDVAAVNLWFWENGVSGIFNL
type: DOMAIN
name: Epimerase_deHydtase
description: NAD-dependent epimerase/dehydratase
Protein sequence:
MSSGKIAQVVGPVVDVMFASGDKLPEINNALIVYKDSDKKQKIVLEVALELGDGMVRTIAMESTDGLTRGLEVLDTGRAISVPVGKETLGRVFNVLGETIDLEEPFAEDVDRQPIHKKAPSFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERITSTQKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLASSSRALSPEIVGEEHYAVATEVQRVLQRYRELQDIIAILGMDELSDEEKTLVGRARRIQFFLSQNFNVAEQFTGLPGSYVPVAETVRGFKEILEGKYDHLPEDAFRSVGPIEDVIKKAEKMGF

Annotated regions:
phrase: PEIVGEEHYAVATEVQRVLQRYRELQDIIAILGMDELSDEEKTLVGRARRIQFFLSQNFNVAEQFTGLPGSYVPVAETVRGFKEILEGKY
type: DOMAIN
name: ATP-synt_VA_C
description: ATP synthase A/B type, C-terminal domain

phrase: IAQVVGPVVDVMFASGDKLPEINNALIVYKDSDKKQKIVLEVALELGDGMVRTIAMESTDGLTRGLEVLDT
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_N
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain

phrase: KGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERITSTQKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTTNLERK
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: PAVDPLASS
type: ACTIVE_SITE
name: ATPase_a/bsu_AS
description: ATPase, alpha/beta subunit, nucleotide-binding domain, active site

phrase: GIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVEGQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERITSTQKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLASS
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_nucl-bd
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain
Protein sequence:
MDKSQLVKEVFDSVANRYDVMNDIMSLGMHRLWKDKMVNSVHFTKNSKVLDIAGGTGDIAIRIAKREPSAQITICDINQNMLSRGRDKTINANQLNFNWVCADAESLPFEDFEFDCCTVAFGIRNVSDRKKALSEAYRVLKPNGQFICLEFAPMHYQNEMFTKFYDLYSFKVIPKIGSIVAKDKSSYEYLVKSIREFPTQAEFKIEIEEVGFKNVEFHNMSYGIVALHIGTK

Annotated regions:
phrase: YDVMNDIMSLGMHRL
type: CONSERVED_SITE
name: UbiE/COQ5_MeTrFase_CS
description: UbiE/COQ5 methyltransferase, conserved site
Protein sequence:
MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEQEPSDNDLAEEELLSQGATQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLVVKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE

Annotated regions:
phrase: DLIEEGNLGLIRA
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: FSTYATWW
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: LNAKQREVLARR
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: TLEDVGREIGLTRER
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: VRQIQVEGLRR
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: DATQLYLGEIGYSPLLTAEEEVYFARRALRGD
type: DOMAIN
name: RNA_pol_sigma70_r1_2
description: RNA polymerase sigma-70 region 1.2

phrase: WLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLR
type: DOMAIN
name: RNA_pol_sigma70_r4
description: RNA polymerase sigma-70 region 4

phrase: ELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILADEKENGPE
type: DOMAIN
name: RNA_pol_sigma70_r3
description: RNA polymerase sigma-70 region 3

phrase: DLIEEGNLGLIRA
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: MIESNLRLVVKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQT
type: DOMAIN
name: RNA_pol_sigma70_r2
description: RNA polymerase sigma-70 region 2

phrase: SRRRMIESNLRLVVKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREI
type: DOMAIN
name: RNA_pol_sigma-70_dom
description: RNA polymerase sigma-70-like domain

phrase: TLEDVGREIGLTRERVRQIQVEGLRR
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70
Protein sequence:
MASTVSAYKEKMKELSVLSLICSCFYSQPHPNTIYQYGDMEVKQLDKRASGQSFEVILKSPSDLSPESPVLSSPPKRKDASLEELQKRLEAAEERRKTQEAQVLKQLAERREHEREVLHKALEENNNFSRLAEEKLNYKMELSKEIREAHLAALRERLREKELHAAEVRRNKEQREEMSG

Annotated regions:
phrase: AERREHERE
type: CONSERVED_SITE
name: Stathmin_CS
description: Stathmin, conserved site

phrase: PKRKDASLE
type: CONSERVED_SITE
name: Stathmin_CS
description: Stathmin, conserved site
Protein sequence:
MRVRGIQRNCPQWWMWGILGFWMIMICRAVGNLWVTVYYGVPVWKEAKTTLFCASDAKAYETEVHNIWATHACVPTDPNPQEIVLKNVTENFNMWKNDMVDQMNEDIISLWDQSLKPCVKLTPLCVTLNCTDKKFNDTSSVNVTHNNNMTREMKNCSFNITTELRDKKEKVSALFYRLDIVPLSENSSNSSNYSEFRLINCNTSVITQACPKVSFDPIPIHYCAPAGFAILKCNNKTFNGTGPCNKVSTVQCTHGIKPVVSTQLLLNGSLAEEKIIIRSENLTDNAKTIIVHLKTPVEIVCTRPGNNTRRSVRIGPGQTFYAMGDIIGDIRQAHCNINGTKWSETVQNVAEQLRGHFPNKTISFEPHSGGDLEVTTHSFNCRGEFFYCNTTNLFTISNATKPDITNGSIILPCRIKQIINMWQGLGRAMYAPPIAGNITCKSNITGLLLTRDGGNNINNTETFRPGGGNMKDNWRSELYKYKVVEIKPLGVAPTASKRRIVEREKRAVGIGAVFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQNLLQLTVWGIKQLQTRVLAIERYLKDQQLLGLWGCSGKLICTTAVPWNASWSNKSQADIWNNMTWMQWDREVSNYTNTIYRLLEDSQSQQETNEKDLLALDSWNNLWNWFNITNWLWYIKIFIMIVGGLIGLRIIFGVLSIVKRVRQGYSPLSFQTLTPTPRELDRLGRIEEEGGEQDKTRSIRLVNGFLALAWDDLRSLCLFSYHQLRD

Annotated regions:
phrase: VQARQLLSGIVQQQSNLLRAIEAQQNLLQLTVWGIKQLQTRVLAIERYLKDQQLLGLWGCSGKLICTTAVPWNASWSNKSQADIWNNMTWMQWDREVSNYTNTIYRLLEDSQSQQETNEKDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKEAKTTLFCASDAKAYETEVHNIWATHACVPTDPNPQEIVLKNVTENFNMWKNDMVDQMNEDIISLWDQSLKPCVKLTPLCVTLNCTDKKFNDTSSV
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: NMTREMKNCSFNITTELRDKKEKVSALFYRLDIVPLSENSSNSSNYSEFRLINCNTSVITQACPKVSFDPIPIHYCAPAGFAILKCNNKTFNGTGPCNKVSTVQCTHGIKPVVSTQLLLNGSLAEEKIIIRSENLTDNAKTIIVHLKTPVEIVCTRPGNNTRRSVRIGPGQTFYAMGDIIGDIRQAHCNINGTKWSETVQNVAEQLRGHFPNKTISFEPHSGGDLEVTTHSFNCRGEFFYCNTTNLFTISNATKPDITNGSIILPCRIKQIINMWQGLGRAMYAPPIAGNITCKSNITGLLLTRDGGNNINNTETFRPGGGNMKDNWRSELYKYKVVEIKPLGVAPTASKRRIVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: MGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQNLLQLTVWGIKQLQTRVLAIERYLKDQQLLGLWGCSGKLICTTAVPWNASWSNKSQADIWNNMTWMQWDREVSNYTNTIYRLLEDSQSQQETNEKDLLALDSWNNLWNWFNITNWLWYIKIFIMIVGGLIGLRIIFGVLSIVKRVRQGYSPLSFQTL
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MAAITASMVAELRAKTDAPMMECKKALTEADGDLGKAEELLRVKLGNKASKAASRVTAEGIVVSYIDGTTGALVELNCETDFVSKNDDFLGFGAKVAELVAKQNPADVAVLSALEMDGSTVDAVRSALIGKIGENMTIRRFVRYTNGGKLVSYLHGTRIGVMVEFDGDEAAAKDVAMHVAAMKPVSLSADQVPAELIAKERSIAEQKAAESGKPAEIVAKMVEGSVQKYLKEVSLLNQSFVKNDKQTVEQMLKGVNTTVKGFTLYVVGEGIEKKQDDFAAEVAAQVAAAQKA

Annotated regions:
phrase: GALVELNCETDFVSKNDDFLGFGAKVAELVAKQNPADVAVLSALEMDGSTVDAVRSALIGKIGENMTIRRFVRYTNGGKLVSYLHGTRIGVMVEFDGDEAAAKDVAMHVAAMKPVSLSADQVPAELIAKERSIAEQKAAESGKPAEIVAKMVEGSVQKYLKEVSLLNQSFVKNDKQTVEQMLKGVNTTVKGFTLYVVG
type: DOMAIN
name: Transl_elong_EFTs/EF1B_dimer
description: Translation elongation factor EFTs/EF1B, dimerisation

phrase: ELNCETDFVS
type: CONSERVED_SITE
name: Transl_elong_Ts_CS
description: Translation elongation factor Ts, conserved site
Protein sequence:
MLRIENLDKRYKTGDRALKDVSLSIGAGDIVGLIGPSGAGKSTLIRCVNRLVQPTGGSIRLGDTELTRLGGTELRKARRRMGMIFQEFALIERLTVMENVLSGRLGYVGFWASWFRRFPQADVQRAFALLARVGLSEQVDKRADALSGGQRQRVGIARALAQDPELLLIDEPTASLDPKTSRQVMRLITELCAERGLAAIVNIHDVALAQLFLPRIVGLRAGEVVYDGPASGLTPDVLTRIYGEEDWSKTSDEDADSVDAPPRAADLPASLKLDPALARL

Annotated regions:
phrase: LRIENLDKRYKTGDRALKDVSLSIGAGDIVGLIGPSGAGKSTLIRCVNRLVQPTGGSIRLGDTELTRLGGTELRKARRRMGMIFQEFALIERLTVMENVLSGRLGYVGFWASWFRRFPQADVQRAFALLARVGLSEQVDKRADALSGGQRQRVGIARALAQDPELLLIDEPTASLDPKTSRQVMRLITELCAERGLAAIVNIHDVALAQLFLPRIVGLRAGEVVYDGPASGLTPDVLTRIYGEE
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: AGDIVGLIGPSGAGKSTLIRCVNRLVQPTGGSIRLGDTELTRLGGTELRKARRRMGMIFQEFALIERLTVMENVLSGRLGYVGFWASWFRRFPQADVQRAFALLARVGLSEQVDKRADALSGGQRQRVGIARALAQDPELLLIDEPTASLDPKTSRQVMRLITELCAERGLAAIVNIHDVALAQLFLPRIVGLRAGEVVYDGPA
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LSGGQRQRVGIARA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: LKDVSLSIGAGDIVGLIGPSGAGKSTLIRCVNRLVQPTGGSIRLGDTELTRLGGTELRKARRRMGMIFQEFALIERLTVMENVLSGRLGYVGFWASWFRRFPQADVQRAFALLARVGLSEQVDKRADALSGGQRQRVGIARALAQDPELLLIDEPT
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain
Protein sequence:
MSTELIAAVEAADSAEGLVRAVAALSAARTDAAIPTLISVLAFNNPGAAVVAVDGLIQLGSPAAQAILNNLDDYNYGARAWALRALAGIGEPAALPLLLSAAREDFSLSVRRAATYGLGRVRWADLSESDRLAQQQQCYETLKLCLQYDPEWVVRYAAAAALETLAPAATQLQSAIAETLNRQAHSDEERAVQARSRLAERRLAAGV

Annotated regions:
phrase: WVVRYAAAAALETLAPAATQLQSAIAE
type: REPEAT
name: PBS_lyase_HEAT
description: PBS lyase HEAT-like repeat

phrase: YGARAWALRALAGIGEPAALPLLLSAARE
type: REPEAT
name: PBS_lyase_HEAT
description: PBS lyase HEAT-like repeat

phrase: LSVRRAATYGLGRVRWADLSESDRLAQQQQCYETLKLCLQY
type: REPEAT
name: PBS_lyase_HEAT
description: PBS lyase HEAT-like repeat
Protein sequence:
MQYNFKVEAFEGPLDLLLHLIHRYEIDIYNIPVAEITEQYLSYVHTMKELQLDVASEYLVMAATLLQIKSKMLLPKHEEDVLDNGDDFIDDPRQELMERLIEYKKYKQVATELKEREQERAQLYTRPPIDFTSLQQEEETNLPLDVTLYDMLAAFQKLMRRKKAKKPVTTRITRQEIPIEQRMTDILKQLEIQGGRQSFYDLFVDDEREIMVVTFLAVLELMKNQQIIIEQEHNFDEIFVSSYTKSA

Annotated regions:
Protein sequence:
MSEEYKKRILIQYENYLLQQDNYVYLATKNSVNWSRNKITPGTAFMNKLVNYLKSDQIQSLLNTNRQDMNIIITDMYEVGEGEKKIVNYVHKYLHNTSDTVMVYSPDADVILLCMLMPVSNLYMLRHNQETSKKFKRNIYDLINIKMLKNNISYYINNNPDFSRENFIVDNINYDLVCISTLFGNDFVPKIETINVKKGFQNIMDAYLKTLIELKERNTYLVRKVNGKFNLSLTFLRRVIKNLLPEENDYIKHNKLYNTYVTAGQIKNVFSYMEINSENIVSVYNEFMREYGDLKNLIKNNGNLTYFETNDQFMNSLKKSICIIMDDQCVNTSYLSNKDTIKLLRNYYIKTREFPRVNINLNTWSHSTDDRRHRNIIRENNYNKYQIEIYKFDKMLDEYYVKFNAQPLDLSRNKIEQFYETYFGIILLDKNKNLTEEANEIMRDYTEGLLWVFDYYFNDKTYVNRWYYQHEKAPLLTHLSMYLDGINHDYFNDLLSGLKKYRVKNIKNFFNPVEQLIYVSPMIPGIIKLLPSNYRSYITSDHLDPFLKTYFIDVEEIVDQLWDQKISDEIDCRSIPYLNKCIIKSIEKPSSSEDKLFLTAIRKVKPTATSHKRSKSIEPDF

Annotated regions:
phrase: TKNSVNWSRNKITPGTAFMNKLVNYLKSDQIQSLLNTNRQDMNIIITDMYEVGEGEKKIVNYVHKYLHNTSDTVMVYSPDADVILLCMLMPVSNLYMLR
type: DOMAIN
name: Xrn1_N
description: Xrn1, N-terminal

phrase: DNINYDLVCISTLFGNDFVPKIETINVKKGFQNIMDAYLKTLIELKERNTYLVRKVNGKFNLSLTFLRRVIKNLLPEENDYIKHNKLYNTYVTAGQIKNVFSYMEINSENIVSVYNEFMREYGDLKNLIKNNGNLTYFETNDQFMNSLKKSICIIMDDQCVNTSYLSNKDTIKLLRNYYIKTREFPRVNINLNTWSHSTDDRRHRNIIRENNYNKYQIEIYKFDKMLDEYYVKFNAQPLDLSRNKIEQFYETYFGIILLDKNKNLTEEANEIMRDYTEGLLWVFDYYFNDKTYVNRWYYQHEKAPLLTHLS
type: DOMAIN
name: Xrn1_helical
description: Xrn1, helical domain
Protein sequence:
MKEVVAKKYVKALILSLSSDEFDKLGNELKDISNAFLLPKLKVIIDSPDISSKQKADFLFSLLDNASNKIHNFLLLLAERKRLGLIPEISKEFEYQQAVRDCKFSGLISGNFELSAAQKTELEERFSKKFGAKIEFENIKNNYNGIKIELDDLGVEVSFSIDRLKAQMSEYILKAI

Annotated regions:
Protein sequence:
MNFEHISREDNEIYALIEKELERQQNGIELIASENVASEAVMEAMGSYLTNKYAEGYPGKRYYGGCYVVDGVEEIARERAKELFGAEHANVQPHSGSQANMAVYFTILEHGDTVLGMDLSHGGHLTHGSPVNFSGKLFNFVSYGVDKDTEEINYDVVRELAIKHKPKLIVAGASAYSRIIDFKKFREICDEIGAYLMVDMAHIAGLVAAELHPSPVPYADFVTSTTHKTLRGPRGGLILCKEKYAKDLDKNIFPGMQGGPLMHIIAAKAVCFKEALDPSFKEYMARVVENCKELGEQLVKRGFKLVSNGTDNHLILVDLNNKDITGKDAEKLLDEVGITLNKNTVPNETRSPFVTSGVRIGTAAITTRGFERRDMEEIADIINETIINRDKDLEQYKQRVEALCEKYPLYK

Annotated regions:
phrase: SREDNEIYALIEKELERQQNGIELIASENVASEAVMEAMGSYLTNKYAEGYPGKRYYGGCYVVDGVEEIARERAKELFGAEHANVQPHSGSQANMAVYFTILEHGDTVLGMDLSHGGHLTHGSPVNFSGKLFNFVSYGVDKDTEEINYDVVRELAIKHKPKLIVAGASAYSRIIDFKKFREICDEIGAYLMVDMAHIAGLVAAELHPSPVPYADFVTSTTHKTLRGPRGGLILCKEKYAKDLDKNIFPGMQGGPLMHIIAAKAVCFKEALDPSFKEYMARVVENCKELGEQLVKRGFKLVSNGTDNHLILVDLNNKDITGKDAEKLLDEVGITLNKNTVPNETRSPFVTSGVRIGTAAITTRGFERRDMEEIADI
type: DOMAIN
name: SHMT-like_dom
description: Serine hydroxymethyltransferase-like domain

phrase: DFVTSTTHKTLRGPRG
type: BINDING_SITE
name: Ser_HO-MeTrfase_PLP_BS
description: Serine hydroxymethyltransferase, pyridoxal phosphate binding site
Protein sequence:
MNKLSVVILAAGKGTRMYSDLPKVLHKVAGKPMVKHVIDTAKQLSADQIHLIYGHGADLLKARLADEPVNWVFQAEQLGTGHAMQQAAPFFKDDENILMLYGDAPLITKETLEKLIAAKPENGIALLTVNLENPTGYGRIIRENGSVVAIVEQKDANPEQLKITEVNTGVMVSDGASFKKWLARLDNNNAQGEYYMTDVIGLANQDGFQVAAVTAEDIMEVEGANNRLQLNALERYYQRKQAKALLLAGVSLADPERFDLRGELVHGKDCEIDINVIIEGKVVLGNNVRIGAGAVLKNVTLHDNVEIKPYSVLEDSVIGEAADVGPFARLRPGAELAAKAHVGNFVEIKKAVIGEGSKVGHLTYIGDAEVGANVNVGAGVITCNYDGANKFKTIIGDDVFVGSDSQLVAPVTIEKGATIGAGSTITKNVAENELVITRVPQRHIQGWQRPTKKK

Annotated regions:
phrase: VVILAAGKGTRMYSDLPKVLHKVAGKPMVKHVIDTAKQLSADQIHLIYGHGADLLKARLADEPVNWVFQAEQLGTGHAMQQAAPFFKDDENILMLYGDAPLITKETLEKLIAAKPENGIA
type: DOMAIN
name: MobA-like_NTP_Trfase
description: MobA-like NTP transferase

phrase: VGSDSQLVAPVTIEKGATIGAGSTITKN
type: CONSERVED_SITE
name: Hexapep_transf_CS
description: Hexapeptide transferase, conserved site

phrase: GVSLADPERFDLRGELVHGKDCEIDINVIIEGKVVLGNNVRIGAGAVLKNVTLHDNVEIKPYSVLEDSVIGEAADVGPFARLRPGAELAAKAHVGNFVEIKKAVIGEGSKVGHLTYIGDAEVGANVNVGAGVITCNYDGANKFKTIIGDDVFVGSDSQLVAPVTIEKGATIGAGSTITKNVAENELVITRVP
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain

phrase: VGPFARLRPGAELAAKAHVGNFVEIKKA
type: CONSERVED_SITE
name: Hexapep_transf_CS
description: Hexapeptide transferase, conserved site

phrase: TIIGDDVFVGSDSQLVAPVTIEKGATIGAGSTIT
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: VHGKDCEIDINVIIEGKVVLGNNVRIGAGAVLK
type: REPEAT
name: Hexapep
description: Hexapeptide repeat
Protein sequence:
MAALRALCGFRGVAAQVLRPGAGVRLPIQPSRGVRQWQPDVEWAQQFGGAVMYPSKETAHWKPPPWNDVDPPKDTIVKNITLNFGPQHPAAHGVLRLVMELSGEMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCNEQAYSLAVEKLLNIRPPPRAQWIRVLFGEITRLLNHIMAVTTHALDLGAMTPFFWLFEEREKMFEFYERVSGARMHAAYIRPGGVHQDLPLGLMDDIYQFSKNFSLRLDELEELLTNNRIWRNRTIDIGVVTAEEALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVEFDVPVGSRGDCYDRYLCRVEEMRQSLRIIAQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAIIGTQDIVFGEVDR

Annotated regions:
phrase: LHRGTEKLIEY
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_49kDa_CS
description: NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site

phrase: DLGAMTPFFWLFEEREKMFEFYERVSGARMHAAYIRPGGVHQDLPLGLMDDIYQFSKNFSLRLDELEELLTNNRIWRNRTIDIGVVTAEEALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVEFDVPVGSRGDCYDRYLCRVEEMRQSLRIIAQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPPGATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAIIGTQDIVFGEVD
type: DOMAIN
name: NADH_Q_OxRdtase_suD
description: NADH-quinone oxidoreductase, subunit D
Protein sequence:
MTTIRRFSCNDLLRFTSVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRVMGYIMGKVEGQGESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKMYEKLGYIIYRRVLRYYSGEEDGLDMRKALSRDVEKKSVIPLKRPITPDELEYD

Annotated regions:
phrase: TTIRRFSCNDLLRFTSVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNRVMGYIMGKVEGQGESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKMYEKLGYIIYRRVLRYYSGEEDGLDMRKAL
type: DOMAIN
name: GNAT_dom
description: GNAT domain

phrase: FNMSFYMTYLARWPDYFHVAEGPGNRVMGYIMGKVEGQGESWHGHVTAVTVSPEYRRQQLAKKLMNLLEDISDKIDKAYFVDLFVRASNTPAIKMYEKLG
type: DOMAIN
name: GNAT_dom
description: GNAT domain
Protein sequence:
MNKTQRHINWLLAVSAATALPVTAAEMINVNDGSLLNQALKAQSQSVAPVETGFKQMKRVVLPNGKVKVRYQQTHHGLPVFNTSVVATESKSGSSEVFGVMAQGIADDVSTLTPSVEMKQAISIAKSRFQQQEKMVAEPATENEKAELMVRLDDNNQAQLVYLVDFFVAEDHPARPFFFIDAQTGEVLQTWDGLNHAQADGTGPGGNTKTGRYEYGSDFPPFVIDKVGTKCSMNNSAVRTVDLNGSTSGNTTYSYTCNDSTNYNDYKAINGAYSPLNDAHYFGKVVFDMYKDWMNTTPLTFQLTMRVHYGNNYENAFWNGSSMTFGDGYSTFYPLVDINVSAHEVSHGFTEQNSGLVYENMSGGMNEAFSDIAGEAAEFYMKGSVDWVVGADIFKSSGGLRYFDQPSRDGRSIDHASDYYNGLNVHYSSGVFNRAFYLLANKAGWDVRKGFEVFTLANQLYWTANSTFDEGGCGVVKAASDMGYSVADVEDAFNTVGVNASCGATPPPSGDVLEIGKPLANLSGNRNDMTYYTFTPSSSSSVVIKITGGTGDADLYVKAGSKPTTTSYDCRPYKYGNEEQCSISAQAGTTYHVMLRGYSNYAGVTLRAD

Annotated regions:
phrase: TYYTFTPSSSSSVVIKITGGTGDADLYVKAGSKPTTTSYDCRPYKYGNEEQCSISAQAGTTYHVMLR
type: DOMAIN
name: Peptidase_C_arc/bac
description: Peptidase, C-terminal, archaeal/bacterial

phrase: TKTGRYEYGSDFPPFVIDKVGTKCSMNNSAVRTVDLNGSTSGNTTYSYTCNDSTNYNDYKAINGAYSPLNDAHYFGKVVFDMYKDWMNTTPLTFQLTMRVHYGNNYENAFWNGSSMTFGDGYSTFYPLVDINVSAHEVSHGFT
type: DOMAIN
name: Peptidase_M4_domain
description: Peptidase M4 domain

phrase: GFKQMKRVVLPNGKVKVRYQQTHHGLPVFNTSVVATESKSG
type: DOMAIN
name: FTP_domain
description: FTP domain

phrase: SGLVYENMSGGMNEAFSDIAGEAAEFYMKGSVDWVVGADIFKSSGGLRYFDQPSRDGRSIDHASDYYNGLNVHYSSGVFNRAFYLLANKAGWDVRKGFEVFTLANQLYWTANSTFDEGGCGVVKAASDMGYSVADVEDAFNTVG
type: DOMAIN
name: Peptidase_M4_C_domain
description: Peptidase M4, C-terminal

phrase: MKQAISIAKSRFQQQEKMVAEPATENEKAELMVRLDDNNQAQLVYLVDFFVAEDHPARPFFFIDAQTGEVLQ
type: DOMAIN
name: PepSY
description: PepSY domain
Protein sequence:
MAAKDVKFGDSARKRMVAGVNILADAVKVTLGPKGRNVVLEKSFGAPTVTKDGVSVAKEIELKDKFENMGAQMVKEVASQANETAGDGTTTATVLAQSIVNEGIKAVTAGMNPMDLKRGIDKGTAEAVKAIREMAKPCDDSRMIAQVGTISANGDETIGKIIADAMEKVGKEGVITVEEGRGLEDELDVVEGMQFDRGFLSPYFINNQDNMSAELEDPYILLVDKKISNIRELLPVLEAVAKAGKPLQIIAEDIEGEALATLVVNNMRGIVKVNAVKAPGFGDRRKEMLQDIAILTGGTVISEEVGLTLENTTLDDLGTAKRVNVTKENTTIIGGAGAEADISARVEQIRKQIEDSSSDYDKEKLQERVAKLAGGVAVIKVGAGSEVEMKEKKARVEDALHSTRAAVEEGIVAGGGVTLIRAIAALDKVDAINDEQKAGVNILRRAMEAPLRQIVFNAGGESSVVVAKVKEGEGSFGFNAATEQYGDMLEMGILDPAKVTRSSLQAAASVASLIITTEAMVADEPEDDKAGGGMPDMGGMGGMGGMGGMM

Annotated regions:
phrase: AAVEEGIVAGG
type: CONSERVED_SITE
name: Chaperonin_Cpn60_CS
description: Chaperonin Cpn60, conserved site
Protein sequence:
MLERTYIEDVTPDDDGEDTTIAGHVHELRDLGGILFVIVRDATGRLQVVAKEDDTPDLFETAEGLSSEDVVQVTGTLEASDQAPGGVELAPTELTVVSEATDVPSIEISKDVDADLSTRLDERHLDVRKPSTKAVFSLRSKAMGAMTDWFYDNRFEEVDTPELSTAGAEGGADLFPVVYYDKEAYLSQSPQLYKQILVASGVDRLFEVGHAFRAEDFGTSRHVSEIAMFDVELGYVEDHHDVMDVQEESLRHTIRHVVEHAQRELDELGSDLSVPEADFPRITFEEAREILADEYDHVPEDDNDLDTKGERLLGEYFEEQGHPAVFVVGYPDEKFYYRQDVDGDDVASRKFDLLYRGQELSSGGQREHDIERLTAKMREQGVEPENFEFYLDAFRYGVPPHGGYGLGIDRLIQQLAGLDNIKEAILFPRDPDRLEP

Annotated regions:
phrase: TIAGHVHELRDLGGILFVIVRDATGRLQVVAKEDDTPDLFETAEGLSSEDVVQVTGTLEASDQAPGGVELAPTELTV
type: DOMAIN
name: NA-bd_OB_tRNA
description: OB-fold nucleic acid binding domain, AA-tRNA synthetase-type

phrase: STRLDERHLDVRKPSTKAVFSLRSKAMGAMTDWFYDNRFEEVDTPELSTAGAEGGADLFPVVYYDKEAYLSQSPQLYKQILVASGVDRLFEVGHAFRAEDFGTSRHVSEIAMFDVELGYVEDHHDVMDVQEESLRHTIRHVVEHAQRELDELGSDLSVPEADFPRITFEEAREILADEYDHVPEDDNDLDTKGERLLGEYFEEQGHPAVFVVGYPDEKFYYRQDVDGDDVASRKFDLLYRGQELSSGGQREHDIERLTAKMREQGVEPENFEFYLDAFRYGVPPHGGYGLGIDRLIQQLAGLDNIKEAILFPR
type: DOMAIN
name: Aa-tRNA-synt_II
description: Aminoacyl-tRNA synthetase, class II (D/K/N)

phrase: FSLRSKAMGAMTDWFYDNRFEEVDTPELSTAGAEGGADLFPVVYYDKEAYLSQSPQLYKQILVASGVDRLFEVGHAFRAEDFGTSRHVSEIAMFDVELGYVEDHHDVMDVQEESLRHTIRHVVEHAQRELDELGSDLSVPEADFPRITFEEAREILADEYDHVPEDDNDLDTKGERLLGEYFEEQGHPAVFVVGYPDEKFYYRQDVDGDDVASRKFDLLYRGQELSSGGQREHDIERLTAKMREQGVEPENFEFYLDAFRYGVPPHGGYGLGIDRLIQQLAGLDNIKEAILF
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II
Protein sequence:
MRPLHTVDQIRRGEAPLLAAQHHPDELMRAAAAEVAAAAAGMLDPVPGARVLLLVGSGGNGGDALYAGAALAAAGARVTAALLTEAPQPRAAAALAAAGGRLRPAGELTGADLQEVDLAVDGVVGIGGAGALREPAARLVAGLAAAGAPVLAVDIPSGVAADTGVAAAGAGDLPGHVTAAATITFGGLRRAHALAPACGRVILADIALAAAGGRPAMGLAESLAGVRVADDAAPAVLIEALADPVPLPDLEPGPEEDKYSGGVLGLLAGSEAYPGAGVLAARAAVAATPAMVRVVGPVRAEVIRDRPEVVGHPDLASCGRVRAWAVGPGRGTGPAAVAELAALLDRAEPVLADADAVSILAAEPGLRAAWRARADRGRVGVLTPHAGEFRRLAAALRAEGHGIPDPEEGRIAAAAALAAATGSTVLLKGWATVIAAPGGAATVVRAGSSWAATPGSGDVLTGLAGAHLARTGDPGTLPAAAVIHAVAAKLAARTPAGEAPASAGGIAAALREATAAVAARGRAAMAQ

Annotated regions:
phrase: IEALADPVPLPDLEPGPEEDKYSGGVLGLLAGSEAYPGAGVLAARAAVAATPAMVRVVGPVRAEVIRDRPEVVGHPDLASCGRVRAWAVGPGRGTGPAAVAELAALLDRAEPVLADADAVSILAAEPGLRAAWRARADRGRVGVLTPHAGEFRRLAAALRAEGHGIPDPEEGRIAAAAALAAATGSTVLLKGWATVIAAPGGAATVVRAGSSWAATPGSGDVLTGLAGAHLARTGDPGTLPAAAVIHAVAAKLAARTPAGEAPASAGGIAAALREAT
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: PEEDKYSGGVLGLLAGSEAYPGAGVLAARAAVAATPAMVRVVGPVRAEVIRDRPEVVGHPDLASCGRVRAWAVGPGRGTGPAAVAELAALLDRAEPVLADADAVSILAAEPGLRAAWRARADRGRVGVLTPHAGEFRRLAAALRAEGHGIPDPEEGRIAAAAALAAATGSTVLLKGWATVIAAPGGAATVVRAGSSWAATPGSGDVLTGLAGAHLARTGD
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: LADPVPLPDLEPGPEEDKYSGGVLGLLAGSEAYPGAGVLAARAAVAATPAMVRVVGPVRAEVIRDRPEVVGHPDLASCGRVRAWAVGPGRGTGPAAVAELAALLDRAEPVLADADAVSILAAEPGLRAAWRARADRGRVGVLTPHAGEFRRLAAALRAEGHGIPDPEEGRIAAAAALAAATGSTVLLKGWATVIAAPGGAATVVRAGSSWAATPGSGDVLTGLAGAHLARTGDPGTLPAAAVIHAVAAKLAARTPAGEAPASAGGIAAALREATAA
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: DELMRAAAAEVAAAAAGMLDPVPGARVLLLVGSGGNGGDALYAGAALAAAGARVTAALLTEAPQPRAAAALAAAGGRLRPAGELTGADLQEVDLAVDGVVGIGGAGALREPAARLVAGLAAAGAPVLAVDIPSGVAADTGVAAAGAGDLPGHVTAAATITFGGLR
type: DOMAIN
name: YjeF_N_dom
description: YjeF N-terminal domain

phrase: IRRGEAPLLAAQHHPDELMRAAAAEVAAAAAGMLDPVPGARVLLLVGSGGNGGDALYAGAALAAAGARVTAALLTEAPQPRAAAALAAAGGRLRPAGELTGADLQEVDLAVDGVVGIGGAGALREPAARLVAGLAAAGAPVLAVDIPSGVAADTGVAAAGAGDLPGHVTAAATITFGGLRRAHALAPACGRVILADIALAAAGG
type: DOMAIN
name: YjeF_N_dom
description: YjeF N-terminal domain

phrase: GLLAGSEAYPGAGVLAARAAVAATPAMVRVVGPVRAEVIRDRPEVVGHPDLASCGRVRAWAVGPGRGTGPAAVAELAALLDRAEPVLADADAVSILAAEPGLRAAWRARADRGRVGVLTPHAGEFRRLAAALRAEGHGIPDPEEGRIAAAAALAAATGSTVLLKGWATVIAAPGGAATVVRAGSSWAATPGSGDVLTGLAGAHLARTGDPGTLPAAAVIHAVAAKLAAR
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase