nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MELSYQEKLTLIKLNELKRAKFEELVKATGLEQVAVMRAVLGLQAKGLAKLHERSEKVVKLTETGKKYAEIGLPEWRALKLLRERGKVTLDDLREVLSDDELKPIVGLLRKEGWASVRKEDGKLILEITEKGLEAEERPIDRALKLLAEKNVVPVKEIEKLIPVKELKRRKIGEEETVTERTVEITPAGEELAPKVELKREVSVLTPELIKSGKWREVEFRRFDIKAPVRRIYPGKKQPYRAFLDKIRRRLIEMGFIEMTVDSLIETQFWNFDALFQPQNHPAREWTDTYQLKYPKSGFLPEEELVERVKTAHERGLAGSRGWGYVWSPERAMLLMPRAHGTALSGRQLAKGVEIPGKYFTIQRVFRPDVLDRTHLIEFNQIDGFVVGEELNFRHLLGILKRFAVEIAGAKKVKFLPDYYPFTEPSVQMSAYHPELGWVEFGGAGIFREEMTKALGIEVPVIAWGIGIDRLAMFKLGIDDIRYLFSYDLRWLREAKLVW

Annotated regions:
phrase: IRRRLIEMGFIEMTVDSLIETQFWNFDALFQPQNHPAREWTDTYQLKYPKSGFLPEEELVERVKTAHERGLAGSRGWGYVWSPERAMLLMPRAHGTALSGRQLAKGVEIPGKYFTIQRVFRPDVLDRTHLIEFNQIDGFVVGEELNFRHLLGILKRFAVEIAGAKKVKFLPDYYPFTEPSVQMSAYHPELGWVEFGGAGIFREEMTKALGIEVPVIAWGIGIDRLAMFKLGIDDIRYLFSYDLRWLR
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: FDIKAPVRRIYPGKKQPYRAFLDKIRRRLIEMGFIEMTVDSLIETQFWNFDALFQPQNHPAREWTDTYQLKYPKSGFLPEEELVERVKTAHERGLAGSRGWGYVWSPERAMLLMPRAHGTALSGRQLAKGVEIPGKYFTIQRVFRPDVLDRTHLIEFNQIDGFVVGEELNFRHLLGILKRFAVEIAGAKKVKFLPDYYPFTEPSVQMSAYHPELGWVEFGGAGIFREEMTKALGIEVPVIAWGIGIDRLAMFKLGIDDIRYLFSYDLRWLR
type: DOMAIN
name: Phenylalanyl-tRNA_Synthase
description: Phenylalanyl-tRNA synthetase
Protein sequence:
MTDPQPSHQAEVPTPERSTDEPRRPNHSQAPSGPPPLDSPRPWRTEGLPKDSKGDDDKKDSKKSRMWRFWIIAGLALLAVWGLLSWQDARNAPPTIAYTEFVAQVEAGNVKEVYAQGDTIQGELNHEAPLPSDGDDQDDAQKKDANYTQFSTERPTFAQDNLLAELQDKGAVVRATPVVEQRGTVGNLVSSLLLWGLLIGVSIWAFRRIAKSGGGLGGFGMQREVKPIEKTAVRVNFSDVAGIDEVKEQVDEIVDFLKNPDKYRRVGARAPRGVLLEGQPGTGKTLLARATAGEADVPFFTASASEFIEMIVGVGAQRVRQLFEEAKKVAPAIIFIDEIDAIGRARGSSRASGSNDEREQTLNQILTEMDGFDGTEGLVVMAATNRSDVLDPALTRPGRFDRVITVSPPDQIGREKILMVHTREIPLAADVNLKALAQTTPGATGADLANLANEAALRAARRNDTLVYQSDFTNALEQIQLGVARSVLIPEEEKRRTAYHEGGHALLGMLQKGADPVRKVSIIPRGQALGVTLSTPDTDRYGYDEQYLRGRIVGALGGMAAEAAVYGVVTTGAESDLRAATSIARQMVGKWGMSTKVGPMTVLFDDVNPRDLGISDETLSVVDAEVRVIISECHAKAVTLLNEHRDKLDAIARELLIKETLDEAEVYQVAGIERPKQVDLHSESVGNGTANQ

Annotated regions:
phrase: LVVMAATNRSDVLDPALT
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: FWIIAGLALLAVWGLLSWQDARNAPPTIAYTEFVAQVEAGNVKEVYAQGDTIQGELNHEAPLPSDGDDQDDAQKKDANYTQFSTERPTFAQDNLLAELQDKGAVVRAT
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular

phrase: IPEEEKRRTAYHEGGHALLGMLQKGADPVRKVSIIPRGQALGVTLSTPDTDRYGYDEQYLRGRIVGALGGMAAEAAVYGVVTTGAESDLRAATSIARQMVGKWGMSTKVGPMTVLFDDVNPRDLGISDETLSVVDAEVRVIISECHAKAVTLLNEHRDKLDAIARELLIKETLDEAEVYQ
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: VLLEGQPGTGKTLLARATAGEADVPFFTASASEFIEMIVGVGAQRVRQLFEEAKKVAPAIIFIDEIDAIGRARGSSRASGSNDEREQTLNQILTEMDGFDGTEGLVVMAATNRSDVLDPALTRPGRFDRVIT
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: DVNLKALAQTTPGATGADLANLANEAALRAARRNDTLVYQSDF
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: APRGVLLEGQPGTGKTLLARATAGEADVPFFTASASEFIEMIVGVGAQRVRQLFEEAKKVAPAIIFIDEIDAIGRARGSSRASGSNDEREQTLNQILTEMDGFDGTEGLVVMAATNRSDVLDPALTRPGRFDRVITVSPP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain
Protein sequence:
MLWIEAVRTLSADLEDPFELEFVWRNLHELNKLSWLNLMREKITDQELKLLTEVSKRLHQNEPPQYIVGWAEFRDLKLKVDERVLIPRPETEELVEMILAENEKDSLKILDIGTGSGAIAISLAQARENWSVKASDISKEALTLAAENAEINQANLEFIQSDVLDKITDSFDIIVSNPPYIAFDETYEMDNSVIKYEPDLALFAENQGLAIYQKIADQAVNHLTDNGKIYLEIGYKQGQAVQAIFQEKFTDKLVSIHQDIFGKDRMISVK

Annotated regions:
phrase: EAVRTLSADLEDPFELEFVWRNLHELNKLSWLNLMREKITDQELKLLTEVSKRLHQNEPPQYIV
type: DOMAIN
name: PrmC_N
description: Release factor glutamine methyltransferase, N-terminal domain

phrase: IVSNPP
type: CONSERVED_SITE
name: DNA_methylase_N6_adenine_CS
description: DNA methylase, N-6 adenine-specific, conserved site

phrase: ENEKDSLKILDIGTGSGAIAISLAQARENWSVKASDISKEALTLAAENAEINQANLEFIQSDVLDKITDSFDIIVSNPPYIAF
type: DOMAIN
name: Small_mtfrase_dom
description: Methyltransferase small domain
Protein sequence:
MVKVYYNGDANEAYIQGKKVAIIGYGSQGHAHAQNLRDSGVEVIIGLRKGKSWEKAEQDGFVVLPVSEATKQADVVMILLPDEHQPKVYKEEIAPNLQPGNALVFAHGFNIHFNQIVPPSDVDVFLVAPKGPGHLVRRTYTEGAGVPALIAVYQDVSGEAKETALAYAKAIGSARAGVIETTFKEETETDLFGEQAVLCGGLTALVKAGFETLVEAGYQPEIAYFECLHELKLIVDLMYEGGLAGMRYSISDTAQWGDFVTGPRIINDAVKAEMKKVLEDIQTGKFAKGWILENEANRPEFNAINRRENEHLIEVVGRELRKMMPFVNAKQKDVVTVGAKN

Annotated regions:
phrase: FKEETETDLFGEQAVLCGGLTALVKAGFETLVEAGYQPEIAYFECLHELKLIVDLMYEGGLAGMRYSISDTAQWGDFVTGPRIINDAVKAEMKKVLEDIQTGKFAKGWILENEANRPEFNAINRRENEHLIEVVGRELRKMM
type: DOMAIN
name: KARI_C
description: Ketol-acid reductoisomerase, C-terminal

phrase: VKVYYNGDANEAYIQGKKVAIIGYGSQGHAHAQNLRDSGVEVIIGLRKGKSWEKAEQDGFVVLPVSEATKQADVVMILLPDEHQPKVYKEEIAPNLQPGNALVFAHGFNIHFNQIVPPSDVDVFLVAPKGPGHLVRRTYTEGAGVPALIAVYQDVSGEAKETALAYAKAIGSARAGVIE
type: DOMAIN
name: KARI_N
description: Ketol-acid reductoisomerase, N-terminal

phrase: IQGKKVAIIGYGSQGHAHAQNLRDSGVEVIIGLRKGKSWEKAEQDGFVVLPVSEATKQADVVMILLPDEHQPKVYKEEIAPNLQPGNALVFAHGFNIHFNQIVPPSDVDVFLVAPKGPGHLVRRTYTEGAGVPALIAVYQDVSGEAKETALAYAKAIGSARA
type: DOMAIN
name: KARI_N
description: Ketol-acid reductoisomerase, N-terminal

phrase: TFKEETETDLFGEQAVLCGGLTALVKAGFETLVEAGYQPEIAYFECLHELKLIVDLMYEGGLAGMRYSISDTAQWGDFVTGPRIINDAVKAEMKKVLEDIQTGKFAKGWILENEANRPEFNAINRRENEHLIEVVGRELRKMMPF
type: DOMAIN
name: KARI_C
description: Ketol-acid reductoisomerase, C-terminal
Protein sequence:
MTESIDLNRSESESDNNTDDVTPIFAIDDSSKGRVSGPTRRSTKGGWTAEEDQILTNVVKKYQGRNWKRIAECLPGSEENRRNDVQCQHRWLKVLDPSLQKGAWKKEEDELLSELVKDYMENDRPPWSKISKELPGRIGKQCRERWHNHLNPTIIKSPWTREEELILVQAQRGNGNKWAEIAKLLPGRTENNIKNHWNCSVKKRLEQFPSNLFSGVVYGSKPSSGFEYNFFNQRNTMVESCITSQIKEAAKSPQRDFLDLTLGLNWRSISSSTSSLRGEESVSSSVDSVCARLNACLETPQNSNNDTVCVKEVREMKERLRMAARTFDTPSIISKTSSPASGLKRLRQKYDTPFPTDARSHMSSEEDHSVSASPSSKYRFVKRNTCSGSKPLERRLDFDFLLWDEHGRRNGIVNFSVRILPQKSDLKSGLVRPFWLR

Annotated regions:
phrase: DPSLQKGAWKKEEDELLSELVKDYMENDRPPWSKISKELPGRIGKQCRERWHNH
type: DOMAIN
name: SANT/Myb
description: SANT/Myb domain

phrase: PWTREEELILVQAQRGNGNKWAEIAKLLPGRTENNIKNHW
type: DOMAIN
name: SANT/Myb
description: SANT/Myb domain

phrase: WTAEEDQILTNVVKKYQGRNWKRIAECLPGSEENRRNDVQCQHRWLKV
type: DOMAIN
name: SANT/Myb
description: SANT/Myb domain

phrase: QKGAWKKEEDELLSELVKDYMENDRPPWSKISKELPGRIGKQCRERWHNHLN
type: DOMAIN
name: SANT/Myb
description: SANT/Myb domain

phrase: TKGGWTAEEDQILTNVVKKYQGRNWKRIAECLPGSEENRRNDVQCQHRWLKVLD
type: DOMAIN
name: SANT/Myb
description: SANT/Myb domain

phrase: IKSPWTREEELILVQAQRGNGNKWAEIAKLLPGRTENNIKNHWNCSVK
type: DOMAIN
name: SANT/Myb
description: SANT/Myb domain

phrase: TRRSTKGGWTAEEDQILTNVVKKYQGRNWKRIAECLPGSEENRRNDVQCQHRWLKV
type: DOMAIN
name: Myb_dom
description: Myb domain

phrase: AWKKEEDELLSELVKDYMENDRPPWSKISKELPGRIGKQCRERWHNH
type: DOMAIN
name: SANT/Myb
description: SANT/Myb domain

phrase: DPSLQKGAWKKEEDELLSELVKDYMENDRPPWSKISKELPGRIGKQCRERWHNHLNPT
type: DOMAIN
name: Myb_dom
description: Myb domain

phrase: KSPWTREEELILVQAQRGNGNKWAEIAKLLPGRTENNIKNHW
type: DOMAIN
name: SANT/Myb
description: SANT/Myb domain

phrase: NPTIIKSPWTREEELILVQAQRGNGNKWAEIAKLLPGRTENNIKNHWNCS
type: DOMAIN
name: SANT/Myb
description: SANT/Myb domain

phrase: TRRSTKGGWTAEEDQILTNVVKKYQGRNWKRIAECLPGSEENRRNDVQCQHRWLKV
type: DOMAIN
name: SANT/Myb
description: SANT/Myb domain

phrase: KSPWTREEELILVQAQRGNGNKWAEIAKLLPGRTENNIKNHWNCSVKKR
type: DOMAIN
name: Myb_dom
description: Myb domain
Protein sequence:
MKILTNEQMHAADQQTIEEQQITSWDHMEKAASNILAWIKKNLPGDNPYHIYAGVGNNGGDGLALGRMLAQMGKKVKVTIVPFSEIHSEDFIKNLNLLKEIPSIEIHTLSQPETSEDFLQANEKPFPTLKGKPAKGFEEFVANKYNGTQPITIDAIFGIGLSRRVSPWVQRVFEEVNRQKGLIISIDTPSGLYLGEDRHEKDLFVTPHVVLTFFAPKLPFLLPQTGRYIPYWEVLPLPLSFDYLKDVATEYDYTTDKEIKRLLRTRHRFTNKGTYGHALLVGGSYGKIGAPILSGKATLRSGAGMLTLLLPKCGYNIAQTALPEAMVLTSSQEEALSPTEIPFQPSAIGIGVGMGTSAYAQGTLASLLRTFANVPFVIDADALNLVASSEDLQRSLPKNTILTPHPKELERLIGKWANDLERQEKVKQFAKKHKVILIVKGAFTMITDGDHFWVNSTGNPAMATAGSGDVLTGVLTGLLSQGYTPLNAAIVGTYIHGKAADTYVRNTKKNTMIASDIIDYLQF

Annotated regions:
phrase: MHAADQQTIEEQQITSWDHMEKAASNILAWIKKNLPGDNPYHIYAGVGNNGGDGLALGRMLAQMGKKVKVTIVPFSEIHSEDFIKNLNLLKEIPSIEIHTLSQPETSEDFLQANEKPFPTLKGKPAKGFEEFVANKYNGTQPITIDAIFGIGLSRRVSPWVQRVFEEVNRQKGLIISIDTPSGLYLGEDRHEKDLFVTPHVVLTFFAPKLPFLLPQTGRYIPYWEVLPLPLSFDYLKD
type: DOMAIN
name: YjeF_N_dom
description: YjeF N-terminal domain

phrase: KEIKRLLRTRHRFTNKGTYGHALLVGGSYGKIGAPILSGKATLRSGAGMLTLLLPKCGYNIAQTALPEAMVLTSSQEEALSPTEIPFQPSAIGIGVGMGTSAYAQGTLASLLRTFANVPFVIDADALNLVASSEDLQRSLPKNTILTPHPKELERLIGKWANDLERQEKVKQFAKKHKVILIVKGAFTMITDGDHFWVNSTGNPAMATAGSGDVLTGVLTGLLSQGYTPLNAAIVGTYIHGKAADTYVRNTKKNTMIASDIIDYL
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: TDKEIKRLLRTRHRFTNKGTYGHALLVGGSYGKIGAPILSGKATLRSGAGMLTLLLPKCGYNIAQTALPEAMVLTSSQEEALSPTEIPFQPSAIGIGVGMGTSAYAQGTLASLLRTFANVPFVIDADALNLVASSEDLQRSLPKNTILTPHPKELERLIGKWANDLERQEKVKQFAKKHKVILIVKGAFTMITDGDHFWVNSTGNPAMATAGSGDVLTGVLTGLLSQGYTPLNAAIVGTYIHGKAADTYVRNTKKNTMIASDIIDYL
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: MEKAASNILAWIKKNLPGDNPYHIYAGVGNNGGDGLALGRMLAQMGKKVKVTIVPFSEIHSEDFIKNLNLLKEIPSIEIHTLSQPETSEDFLQANEKPFPTLKGKPAKGFEEFVANKYNGTQPITIDAIFGIGLSRRVSPWVQRVFEEVNRQKGLIISIDTPSGLYLGEDRHEKDLFVTPHVVLTFFAP
type: DOMAIN
name: YjeF_N_dom
description: YjeF N-terminal domain

phrase: AGSGDVLTGV
type: CONSERVED_SITE
name: Carbohydrate_kinase_pred_CS
description: Carbohydrate kinase, predicted, conserved site

phrase: LLVGGSYGKIGAPILSGKATLRSGAGMLTLLLPKCGYNIAQTALPEAMVLTSSQEEALSPTEIPFQPSAIGIGVGMGTSAYAQGTLASLLRTFANVPFVIDADALNLVASSEDLQRSLPKNTILTPHPKELERLIGKWANDLERQEKVKQFAKKHKVILIVKGAFTMITDGDHFWVNSTGNPAMATAGSGDVLTGVLTGLLSQGYTPLNAAIVGTYIHGKAADTYVRNTKKNTMIASDIIDYL
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: TNKGTYGHALLVGGSYGKIGAPILSGKATLRSGAGMLTLLLPKCGYNIAQTALPEAMVLTSSQEEALSPTEIPFQPSAIGIGVGMGTSAYAQGTLASLLRTFANVPFVIDADALNLVASSEDLQRSLPKNTILTPHPKELERLIGKWANDLERQEKVKQFAKKHKVILIVKGAFTMITDGDHFWVNSTGNPAMATAGSGDVLTGVLTGLLSQGYTPLNAAIVGTYIHGKAADTYVRNTKKNTMIASDIIDY
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: TDKEIKRLLRTRHRFTNKGTYGHALLVGGSYGKIGAPILSGKATLRSGAGMLTLLLPKCGYNIAQTALPEAMVLTSSQEEALSPTEIPFQPSAIGIGVGMGTSAYAQGTLASLLRTFANVPFVIDADALNLVASSEDLQRSLPKNTILTPHPKELERLIGKWANDLERQEKVKQFAKKHKVILIVKGAFTMITDGDHFWVNSTGNPAMATAGSGDVLTGVLTGLLSQGYTPLNAAIVGTYIHGKAADTYVRNTKKNTMIASDIIDYLQ
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase
Protein sequence:
MNDTSNNQKTTHFGYEEVPVEEKQEKVGHVFRSVANRYDLMNDIISLGTHRLIKRFAIELSALRPGHKVLDLAGGTGDFSLRFSSIVEDEGQVVLADINEAMLDVGRDRITDANKIHNVQFAQVNAEELPFADKTFDCICIAYGLRNITNKDAALKSMERVLKPGGRILVLEFSKPKNRFIGKAYESFSSLWPAAGKLITGDANSYRYLVESIRMHPDQETLLEMMKSAGLINCKYHDVLNGICAIHLGFKSS

Annotated regions:
phrase: RVLKPGGRILVLEF
type: CONSERVED_SITE
name: UbiE/COQ5_MeTrFase_CS
description: UbiE/COQ5 methyltransferase, conserved site
Protein sequence:
MLQKREKVLLLRTFQGRTLRIVREHYLRPSVPCNSPLCPQPAACRNDGKLLAAEVTHYVIPDWKVVQDYLEVLEFPELKGVIFMQTACQAVQHQRGRRQYNKLRNLLKDARHDCVLFANEFQQHCYLPREKGEAMEKWQTRSIYNSAVWYYHHCEDRMPIVMVTEDEEAIQKYGSETEGVFVISFKNYLDNFWPDLKAAHDLCDSILQSRRERETESQETHGKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLHGASSKDSGLVSDILIHGSKARNRSIHGDVVVVEMLPKSEWKGRTAALGENDSDDKASGESPSEPMPTGRVVGILQKNWRDYVVTFPSKEEVQSQGKNAQKILVTPWDYRIPKIRISTQQAEALQDFRVVVRIDSWEATSVYPNGHFVRVLGRIGDLEGEIATILVENSISVVPFSEAQMCEMPVNTPENPWKVSPKEEQERKDLRTTHLVFSIDPKGCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDVEARTRATTYYLADRRYDMLPSILSADLCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQELLDGNFSIVDDIPELKALDKQSQQAKLEELVWAIGKLTDIARHIRAKRDRCGALELEGVEVRVQLDDKKNIRDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSELRECAKAKGFFIDTRSNKTLADSLDSANDPKDPLVNKLLRSMATQAMSNALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDKKMEIKENLFSNKNLEELCRHINNRNRAAQRSQKQSTELFQCMYFKDRDAETEERCIADGVIYSIRTNGVLVFIPRFGIKGAAYLKNKDSLVISCGPEGSSEWKPGSLQRSQNKIISTTAGGQSVTFHLFDHVTVRISVQASRCHSDTIRLEIVSNKPYMIPNTELCHQSSLLKSELVKEVTRSVEEAQLAQEVKGKVIQEEHQEYCQTKGRSLYTLLEEIRDLALLDVSDSCAM

Annotated regions:
phrase: AGIKSGRYIQGILNVNKHRAQIEAFVRLHGASSKDSGLVSDILIHGSKARNRSIHGDVVVVEMLPKSEWKGRTA
type: DOMAIN
name: Rrp44_CSD1
description: Rrp44-like cold shock domain

phrase: RKDLRTTHLVFSIDPKGCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDVEARTRATTYYLADRRYDMLPSILSADLCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQELLDGNFSIVDDIPELKALDKQSQQAKLEELVWAIGKLTDIARHIRAKRDRCGALELEGVEVRVQLDDKKNIRDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSELRECAKAKGFFIDTRSNKTLADSLDSANDPKDPLVNKLLRSMATQAMSNALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAIS
type: DOMAIN
name: RNase_II/R
description: Ribonuclease II/R

phrase: ADGVIYSIRTNGVLVFIPRFGIKGAAYLKNKDSLVISCGPEGSSEWKPGSLQRSQNKIISTTAGGQSVTFHLFDHVTVRISVQA
type: DOMAIN
name: RRP44_S1
description: Exosome complex exonuclease RRP44, S1 domain

phrase: HYGLALDKYTHFTSPIRRYSDIVV
type: CONSERVED_SITE
name: RNase_II/R_CS
description: Ribonuclease II/R, conserved site

phrase: RKDLRTTHLVFSIDPKGCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDVEARTRATTYYLADRRYDMLPSILSADLCSLLGGVDRYAVSVMWELDKTSYEIKKVWYGRTIIRSAYKLFYEAAQELLDGNFSIVDDIPELKALDKQSQQAKLEELVWAIGKLTDIARHIRAKRDRCGALELEGVEVRVQLDDKKNIRDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSELRECAKAKGFFIDTRSNKTLADSLDSANDPKDPLVNKLLRSMATQAMSNALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAI
type: DOMAIN
name: RNase_II/R
description: Ribonuclease II/R

phrase: ILVTPWDYRIPKIRISTQQAEALQDFRVVVRIDSWEATSVYPNGHFVRVLGRIGDLEGEIATILVE
type: DOMAIN
name: Dis3_CSD2
description: Dis3-like cold-shock domain 2
Protein sequence:
MKSIIFATNNLHKLEEVQQILHAKFKVMSLSEVGINEEIPEDHETLEENAMQKAEFVFARTGLPTFADDTGLEVESLGNLPGVYSARYAGPDKISADNVKKLLHELKDESNRKARFRCAIAYISSDEKRIFNGIVEGKIIHECRGRDGFGYDPVFVPDGNDLTFAEMSADEKNKISHRGRAVSLLAEYLLK

Annotated regions:
Protein sequence:
MSIGILGKKLGMSQFFDEQGKAVPVTLIEAGPCRITQLKSSETDGYQAVQIGFGEIREKLINKPAKGHLAKSGEDLVRHLCEYRVDDLDGIQLGGAVTVGDFAAGQKVDVSGDTMGRGFAGLQKRHGFSRGPMTHGSKNHRQPGSIGAGTTPGRIYPGKRMSGRYGGKKITTRGLTILKIDSERNLLVVKGSVPGKPGSLLNIRPANRVGAKPAKGGK

Annotated regions:
phrase: FAAGQKVDVSGDTMGRGFAGLQK
type: CONSERVED_SITE
name: Ribosomal_uL3_CS
description: Large ribosomal subunit protein uL3, conserved site
Protein sequence:
MSDVKRVVLAFSGGLDTSVILKWLQQTYQCEVVTFTADLGQGEELEPARAKAKLMGVPDEHIFIDDLREEFVKDYVFPMMRGNALYEGLYLLGTSIARPLIAKRQIEIARAVGADAVSHGATGKGNDQVRFELGYYGLAPDIRVIAPWREWDLTSRTALIDFAEKHQIPVPKDKRGESPFSTDANLLHTSSEGKVLEDPWEEVPDYVYSRTVNPEDAPDQPEIITIDFERGDGVALNGEGMSPATLLTALNELGRKHGIGRLDLVENRFVGMKSRGMYETPGGAIYHLAHRGIEQITLDRGAAHLKDELAPRYAELIYNGFWFSPEREMLQAAIDHSQEKVTGTVRLKLYKGGVHVIGRKSPYTLYSEKVVTFEDDAGAYDQRDAAGFIKLNALRLRLLGRRDGR

Annotated regions:
phrase: FSTDANLLHTSSEGKVLEDPWEEVPDYVYSRTVNPEDAPDQPEIITIDFERGDGVALNGEGMSPATLLTALNELGRKHGIGRLDLVENRFVGMKSRGMYETPGGAIYHLAHRGIEQITLDRGAAHLKDELAPRYAELIYNGFWFSPEREMLQAAIDHSQEKVTGTVRLKLYKGGVHVIGRKSPYTLYSEKVVTFEDDAGAYDQRDAAGFIKLNALRL
type: DOMAIN
name: Arginosuc_syn_C
description: Arginosuccinate synthase C-terminal domain

phrase: GATGKGNDQVR
type: CONSERVED_SITE
name: Arginosuc_synth_CS
description: Argininosuccinate synthase, conserved site

phrase: RVVLAFSGGLDTSVILKWLQQTYQCEVVTFTADLGQGEELEPARAKAKLMGVPDEHIFIDDLREEFVKDYVFPMMRGNALYEGLYLLGTSIARPLIAKRQIEIARAVGADAVSHGATGKGNDQVRFELGYYGLAPDIRVIAPWREWDLTSRTALIDFAEKHQI
type: DOMAIN
name: Arginosuc_syn_N
description: Arginosuccinate synthase-like, N-terminal domain

phrase: AFSGGLDT
type: CONSERVED_SITE
name: Arginosuc_synth_CS
description: Argininosuccinate synthase, conserved site
Protein sequence:
MRVRGILRNYPHWWIWGILGFWMLINCNAENLWVTVYYGVPVWKEAKTTLFCASDAKAYKREVHNVWATHACVPTDPNPQEVHLENVTEKFNMWKNDMVDQMHEDIISLWDQSLKPCVKLTPLCVTLNCSDVPTSNITNKQEMKNCSFNVTTEIRDKKQKVNSLFYRLDIVQIDKGNNNSNNSEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGYAILKCNNKTFNGTGPCNNISTVQCTHGIKPVVSTQLLLNGSLAEEGIIIRSEDLEDNVKTIIVQFSTPVEINCTRPGNNTRKSIRIGPGQAFYARGDIIGDIRKAYCNVSKSKWNNALQQVAGQLMKYYGNRTIKFNSSSGGDLEITTHSFNCRGEFFYCDTSDLFNSTWNYTSITSNSTESNDTITLQCRIKQIINMWQREGQAMYAPPIEGNITCMSNITGLLLVRDGGINNRTDEIFRPGGGNMKDNWRSELYKYKVVKLEPLGVAPTRAKRRVVEREKRAVGLGAVFIGFLGAAGSTMGAASITLTVQARNLLSGIVQQQNNLLRAIEAQQHMLKLTVWGIKQLQARVLAVERYLHDQQLLGIWGCSGKLICTTNVPWNSSWSNKSFNEIWDNMTWLQWDREIDNYTEIIYTLIEESQNQQEKNEQDLLALDKWESLWSWFSITKWLWYIKIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQTLTPNPRGPDRLGRIEEEGGEQGRGRSIRLVSGFLPLIWDDLRSLCLFCYHRLRDFISVTA

Annotated regions:
phrase: VQARNLLSGIVQQQNNLLRAIEAQQHMLKLTVWGIKQLQARVLAVERYLHDQQLLGIWGCSGKLICTTNVPWNSSWSNKSFNEIWDNMTWLQWDREIDNYTEIIYTLIEESQNQQEKNEQDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASITLTVQARNLLSGIVQQQNNLLRAIEAQQHMLKLTVWGIKQLQARVLAVERYLHDQQLLGIWGCSGKLICTTNVPWNSSWSNKSFNEIWDNMTWLQWDREIDNYTEIIYTLIEESQNQQEKNEQDLLALDKWESLWSWFSITKWLWYIKIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKEAKTTLFCASDAKAYKREVHNVWATHACVPTDPNPQEVHLENVTEKFNMWKNDMVDQMHEDIISLWDQSLKPCVKLTPLCVTLNCSDVPTSNI
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: KQEMKNCSFNVTTEIRDKKQKVNSLFYRLDIVQIDKGNNNSNNSEYRLINCNTSAITQACPKVSFEPIPIHYCAPAGYAILKCNNKTFNGTGPCNNISTVQCTHGIKPVVSTQLLLNGSLAEEGIIIRSEDLEDNVKTIIVQFSTPVEINCTRPGNNTRKSIRIGPGQAFYARGDIIGDIRKAYCNVSKSKWNNALQQVAGQLMKYYGNRTIKFNSSSGGDLEITTHSFNCRGEFFYCDTSDLFNSTWNYTSITSNSTESNDTITLQCRIKQIINMWQREGQAMYAPPIEGNITCMSNITGLLLVRDGGINNRTDEIFRPGGGNMKDNWRSELYKYKVVKLEPLGVAPTRAKRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MDIFPISLKLKDQPCLLVGGGKIAYRKAVLLAKAGAIIDVIAPEIEPALLDLLHDTGGQFRNIEFSITVEIAHYRLVIAATNRAEVNKQVFLHCETQNVLVNSVDDIPHCRFMVPAIIDRSPLIISVASNGTSPVLSRQIRTQLESTIPHGMGKLAEFSGKWRAAVKAKIANPDERRIFWEELYASPLREQIFHDNLTEADTYIQHALNDWQAPKGEVYLVGAGPGDPELLTLKALRLMQQADVVIYDRLVSKPILEMCRRDAEKVYVGKARSNHAVPQEGINALLVKYAQAGKRVCRLKGGDPFIFGRGGEEIQQLFDAGVSFQVVPGITAASGCSAYAGIPLTHRDYAQSVRFLTGHLKEGSPELPWNELVYENQTLVLYMGLVGLEKICKNLIDHGQRPSMPVALISKGTTPEQKVVVGTLADIADKVAEYEIQAPTLTIIGEVVKLREQLQWR

Annotated regions:
phrase: VCRLKGGDPFIFGRGGEEIQQLFDAGVSFQVVP
type: CONSERVED_SITE
name: Uropor_MeTrfase_CS
description: Uroporphiryn-III C-methyltransferase, conserved site

phrase: MGKLAEFSGKWRAAVKAKIANPDERRIFWEELYASPLREQIFHDNLTEADTYIQHA
type: DOMAIN
name: Sirohaem_synthase_dimer_dom
description: Sirohaem synthase, dimerisation domain

phrase: VYLVGAGPGDPELLTLKALRLMQQADVVIYDRLVSKPILEMCRRDAEKVYVGKARSNHAVPQEGINALLVKYAQAGKRVCRLKGGDPFIFGRGGEEIQQLFDAGVSFQVVPGITAASGCSAYAGIPLTHRDYAQSVRFLTGHLKEGSPELPWNELVYENQTLVLYMGLVGLEKICKNLIDHGQRPSMPVALISKGTTPEQKVVVGTLAD
type: DOMAIN
name: 4pyrrol_Mease
description: Tetrapyrrole methylase

phrase: VGAGPGDPELLTLK
type: CONSERVED_SITE
name: Uropor_MeTrfase_CS
description: Uroporphiryn-III C-methyltransferase, conserved site

phrase: FPISLKLKDQPCLLVGGGKIAYRKAVLLAKAGAIIDVIAPEIEPALLDLLHDTGGQFRNIEFSITVEIAHYRLVIAATNRAEVNKQVFLHCETQNVLVNSVDDIPHCRFMVPAIIDRSPLIISVASNGTSPVLSRQIRTQLESTIPHGMGKLAEFSGKWRAAVKAKIANPDERRIFWEELYASPLREQIFHDNLTEADTYIQHA
type: DOMAIN
name: Sirohaem_synthase_N
description: Sirohaem synthase, N-terminal

phrase: GEVYLVGAGPGDPELLTLKALRLMQQADVVIYDRLVSKPILEMCRRDAEKVYVGKARSNHAVPQEGINALLVKYAQAGKRVCRLKGGDPFIFGRGGEEIQQLFDAGVSFQVVPGITAASGCSAYAGIPLTHRDYAQSVRFLTGHLKEGSPELPWNELVYENQTLVLYMGLVGLEKICKNLIDHGQRPSMPVALISKGTTPEQKVVVGTLADIADKVAEYEIQAPTLTIIGEVVKL
type: DOMAIN
name: CobA/CysG_C
description: Uroporphyrin-III C-methyltransferase

phrase: VGAGPGDPELLTLKALRLMQQADVVIYDRLVSKPILEMCRRDAEKVYVGKARSNHAVPQEGINALLVKYAQAGKRVCRLKGGDPFIFGRGGEEIQQLFDAGVSFQVVPGITAASGCSAYAGIPLTHRDYAQSVRFLTGHLKEGSPELPWNELVYENQTLVLYMGLVGLEKICKNLIDHGQRPSMPVALISKGTTPEQKVVVGTLADIADKVAEYEIQAPTLTIIGEV
type: DOMAIN
name: CobA/CysG_C
description: Uroporphyrin-III C-methyltransferase
Protein sequence:
MNFEGLDPGMGDFSPALHGTLEPGLEPPLDPRLDPALLQGVDLDPDGLTVSVPESVHLLEGMFSELHSVVAEVGIPVTAAHFDLQEELLWMGNHRGHASSFFGTTMGRYSSFQVHATDDVRNIQSLETGVLFLTKNNLKGLTRGGLIMFDYPMEESADMHSLLLTDNNTLLMGGLQNYVCEVDLNTVQETQRFTVEVPGVAIMRQSNRSFFCGHTSGKVSLRDPRTFKLEQQFDAFSGSLSDFDVHGNLLVACGFSSRGLNGLACDRFLMVYDLRMMRAVTPLQVHVDPLFLRFIPTYTSRLVIISQTGQCQFCEPTGLANLADIFHVNTVGQLLMSFDVSSSKQALVFGDSGGCVHLWSDAPEVSFNGYSRDTDFALPCMVDSMPHLDWNHDLLPLSLIPMPLTSTEPLLSDWLTALASPSPRRAPAVDPEILRTMKTVGFIGYAPNPRTRLRNQVPYKVKEAELEYDSYNQVPESPLGRDEEPHLHMVPKKYRKVTIKYSKLGLEDFDFKHYNKTLFAGLEPHIPNAYCNCMIQVLYFLEPIRCLVQNHLCQKEFCLACELGFLFHMLDLSRGDPCQASNFLRAFRTIPEASALGLILADSDEQTGKARLGRLIQSWNRFILTQLHQETQEQEGPQAYRGSFGSSGESVIGRLFGCEVENSSMCRCSKETVRSSLTLLFTLHYPEQNKMIKEYDFAEILKKSICLEQNTQAWCEKCEKYQPTVQTRNIRCLPDVLVINCEVNSVKEAEFWKAQAEVRNLSEHKHVY

Annotated regions:
phrase: LEGMFSELHSVVAEVGIPVTAAHFDLQEELLWMGNHRGHASSFFGTTMGRYSSFQVHATDDVRNIQSLETGVLFLTKNNLKGLTRGGLIMFDYPMEESADMHSLLLTDNNTLLMGGLQNYVCEVDLNTVQETQRFTVEVPGVAIMRQSNRSFFCGHTSGKVSLRDPRTFKLEQQFDAFSGSLSDFDVHGNLLVACGFSSRGLNGLACDRFLMVYDLRMMRAVTPLQVHVDPLFLRFIPTYTSRLVIISQTGQCQFCEPTGLANLADIFHVNTVGQLLMSFDVSSSKQALVFGDSGGCVHLW
type: DOMAIN
name: PAN2_N
description: PAN2-PAN3 deadenylation complex catalytic subunit PAN2, N-terminal

phrase: AGLEPHIPNAYCNCMIQVLYFLEPIRCLVQNHLCQKEFCLACELGFLFHMLDLSRGDPCQASNFLRAFRTIPEASALGLILADSDEQTGKARLGRLIQSWNRFILTQLHQETQEQEGPQAYRGSFGSSGESVIGRLFGCEVENSSMCRCSKETVRSSLTLLFTLHYPEQNKMIKEYDFAEILKKSICLEQNTQAWCEKCEKYQPTVQTRNIRCLPDVLVINCEVNSVKEAEFWKA
type: DOMAIN
name: PAN2_UCH_dom
description: PAN2, UCH domain

phrase: AGLEPHIPNAYCNCMIQVLYFLEPIRCLVQNHLCQKEFCLACELGFLFHMLDLSRGDPCQASNFLRAFRTIPEASALGLILADSDEQTGKARLGRLIQSWNRFILTQLHQETQEQEGPQAYRGSFGSSGESVIGRLFGCEVENSSMCRCSKETVRSSLTLLFTLHYPEQNKMIKEYDFAEILKKSICLEQNTQAWCEKCEKYQPTVQTRNIRCLPDVLVINCEVNSVKEAEFWKAQAEVRNLSEHKHV
type: DOMAIN
name: USP_dom
description: Ubiquitin specific protease domain
Protein sequence:
MSLLQLSPLLALLLLLCSSVSETAADYENTWNFYYERPCCTGNDQGNNNYGKHGADHVREFNCGKLYYRTFHMNEDRDTLYVGAMDRVFRVNLQNISSSNCNRDVINLEPTRDDVVSCVSKGKSQIFDCKNHVRVIQSMDQGDRLYVCGTNAHNPKDYVIYANLTHLPRSEYVIGVGLGIAKCPYDPLDNSTAIYVENGNPGGLPGLYSGTNAEFTKADTVIFRTDLYNTSAKRLEYKFKRTLKYDSKWLDKPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNLLAHNWATYLKARLNCSISGEFPFYFNEIQSVYQLPSDKSRFFATFTTSTNGLIGSAVCSFHINEIQAAFNGKFKEQSSSNSAWLPVLNSRVPEPRPGTCVNDTSNLPDTVLNFIRSHPLMDKAVNHEHNNPVYYKRDLVFTKLVVDKIRIDILNQEYIVYYVGTNLGRIYKIVQYYRNGESLSKLLDIFEVAPNEAIQVMEISQTRKSLYIGTDHRIKQIDLAMCNRRYDNCFRCVRDPYCGWDKEANTCRPYELDLLQDVANETSDICDSSVLKKKIVVTYGQSVHLGCFVKIPEVLKNEQVTWYHHSKDKGRYEIRYSPTKYIETTERGLVVVSVNEADGGRYDCHLGGSLLCSYNITVDAHRCTPPNKSNDYQKIYSDWCHEFEKYKTAMKSWEKKQAQCSTRQNFSSNQHPNEIFRKPNV

Annotated regions:
phrase: KKKIVVTYGQSVHLGCFVKIPEVLKNEQVTWYHHSKDKGRYEIRYSPTKYIETTERGLVVVSVNEADGGRYDCHLGGSLLCSYNITV
type: DOMAIN
name: Ig_sub
description: Immunoglobulin domain subtype

phrase: YRTFHMNEDRDTLYVGAMDRVFRVNLQNISSSNCNRDVINLEPTRDDVVSCVSKGKSQIFDCKNHVRVIQSMDQGDRLYVCGTNAHNPKDYVIYANLTHLPRSEYVIGVGLGIAKCPYDPLDNSTAIYVENGNPGGLPGLYSGTNAEFTKADTVIFRTDLYNTSAKRLEYKFKRTLKYDSKWLDKPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNLLAHNWATYLKARLNCSISGEFPFYFNEIQSVYQLPSDKSRFFATFTTSTNGLIGSAVCSFHINEIQAAFNGKFKEQSSSNSAWLPVLNSRVPEPRPGTCVNDTSNLPDTVLNFIRSHPLMDKAVNHEHNNPVYYKRDLVFTKLVVDKIRIDILNQEYIVYYVGTNLGRIYKIVQYYRNGESLSKLLDIFEVAPNEAIQVMEISQT
type: DOMAIN
name: Semap_dom
description: Sema domain

phrase: IQSVYQLPSDKSRFFATFTTSTNGLIGSAVCSFHINEIQAAFNGKFKEQSSSNSAWLPVLNSRVPEPRPGTCVNDTSNLPDTVLNFIRSHPLMDKAVNHEHNNPVYYKRDLVFTKLVVDKIRIDILNQEYIVYYVGTNLGRIYKIVQYYRNGESLSKLLDIFEVAPNEAIQVMEI
type: DOMAIN
name: Semap_dom
description: Sema domain

phrase: QGNNNYGKHGADHVREFNCGKLYYRTFHMNEDRDTLYVGAMDRVFRVNLQNISSSNCNRDVINLEPTRDDVVSCVSKGKSQIFDCKNHVRVIQSMDQGDRLYVCGTNAHNPKDYVIYANLTHLPRSEYVIGVGLGIAKCPYDPLDNSTAIYVENGNPGGLPGLYSGTNAEFTKADTVIFRTDLYNTSAKRLEYKFKRTLKYDSKWLDKPNFVGSFDIGEYVYFFFRETAVEYINCGKAVYSRIARVCKKDVGGKNLLAHNWATYLKARLNCSISGEFPFYFNEIQSVYQLPSDKSRFFATFTTSTNGLIGSAVCSFHINEIQAAFNGKFKEQSSSNSAWLPVLNSRVPEPRPGTCVNDTSNLPDTVLNFIRSHPLMDKAVNHEHNNPVYYKRDLVFTKLVVDKIRIDILNQEYIVYYVGTNLGRIYKIVQYYRNGESLSKLLDIFEVAPNEAIQVMEISQTRKSLYIGTDHRIKQID
type: DOMAIN
name: Semap_dom
description: Sema domain

phrase: PYELDLLQDVANETSDICDSSVLKKKIVVTYGQSVHLGCFVKIPEVLKNEQVTWYHHSKDKGRYEIRYSPTKYIETTERGLVVVSVNEADGGRYD
type: DOMAIN
name: Ig-like_dom
description: Immunoglobulin-like domain
Protein sequence:
MEHKVTCVLAMVLMLALSSLAQNQEETCAVIPRERINCGFPGVTAQQCKEKGCCFDDSVRGFPWCFRPLVIENQQEEECPF

Annotated regions:
phrase: CAVIPRERINCGFPGVTAQQCKEKGCCFDDSVRGFPWCFR
type: DOMAIN
name: P_trefoil_dom
description: P-type trefoil domain

phrase: ETCAVIPRERINCGFPGVTAQQCKEKGCCFDDSVRGFPWCFRP
type: DOMAIN
name: P_trefoil_dom
description: P-type trefoil domain

phrase: ETCAVIPRERINCGFPGVTAQQCKEKGCCFDDSVRGFPWCFRPLVI
type: DOMAIN
name: P_trefoil_dom
description: P-type trefoil domain

phrase: RINCGFPGVTAQQCKEKGCC
type: CONSERVED_SITE
name: P_trefoil_CS
description: P-type trefoil, conserved site

phrase: ETCAVIPRERINCGFPGVTAQQCKEKGCCFDDSVRGFPWCFR
type: DOMAIN
name: P_trefoil_dom
description: P-type trefoil domain