nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MLVLRKFRWRKWTAETLESTKMTRPIDVHQLLKSRSAGPKYMSVEERERVVIEHSNDEVDLGVEYAKKRNVDEVAEDSARESKKKSKRLDFDWDPADNTLEGYQPIVNPVILERIRQQEDQGDDLEAQYLGKSWREKLLVEMDERDWRIMREEFNITSKGKGAVKHPLRNWSETNVIPTDLVRALTEGMGFDEPTAIQRITIPNAISSNKSVPRDILGIASTGSGKTLAFSIPILARLDALPARPVNLKTLDGPLALVLVPTRELAQQISQEINRLLSAWENKKNLNAVSIVGGHSMSDISHTLRNGCDILIATPGRLLDVLDNHLVVLNKIQSLVLDEADRMIDLGFEDQMKSILSHLMADELAARQTMLFTATLSSSVESIAKGYLKNPLHVSVGSRWDSDKPLITQVVRHTGDDDKKLSFLKDDLIKNGLPAIIFINYKETADWLTLRLSDRFNIVTLHGSKSQSQRESAIQKLKSGTANVLIATNVAARGLDIPDVALVVNFQMSKKFDDYIHRIGRTGRAGKTGIAVTYLTGEEDPQLIKQLAKYVKDVDPNKENDFPEECAKHFGIVSETRNRIIY

Annotated regions:
phrase: DDDKKLSFLKDDLIKNGLPAIIFINYKETADWLTLRLSDRFNIVTLHGSKSQSQRESAIQKLKSGTANVLIATNVAARGLDIPDVALVVNFQMSKKFDDYIHRIGRTGRAGKTGIAVTYLTGEEDPQLIKQLAKYVKDVDPNKENDFPEECAKH
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: DWLTLRLSDRFNIVTLHGSKSQSQRESAIQKLKSGTANVLIATNVAARGLDIPDVALVVNFQMSKKFDDYIHRIGRTGRA
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: TAIQRITIPNAISSNKSVPRDILGIASTGSGKTLAFSIPILARLDALPARPVNLKTLDGPLALVLVPTRELAQQISQEINRLLSAWENKKNLNAVSIVGGHSMSDISHTLRNGCDILIATPGRLLDVLDNHLVVLNKIQSLVLDEADRMIDLGFEDQMKSILSHLMADELAARQTMLFTATLSSSVE
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: LSFLKDDLIKNGLPAIIFINYKETADWLTLRLSDRFNIVTLHGSKSQSQRESAIQKLKSGTANVLIATNVAARGLDIPDVALVVNFQMSKKFDDYIHRIGRTGRA
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: GFDEPTAIQRITIPNAISSNKSVPRDILGIASTGSGKTLAFSIPILARLDALPARPVNLKTLDGPLALVLVPTRELAQQISQEINRLLSAWENKKNLNAVSIVGGHSMSDISHTLRNGCDILIATPGRLLDVLDNHLVVLNKIQSLVLDEADRMIDLGFEDQMKSILSHLMADELAARQTMLFTATLSSSVESIAKGYLKNPLHVSVGSRWDSDKPLITQ
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: VLDEADRM
type: CONSERVED_SITE
name: RNA-helicase_DEAD-box_CS
description: ATP-dependent RNA helicase DEAD-box, conserved site

phrase: SSNKSVPRDILGIASTGSGKTLAFSIPILARLDALPARPVNLKTLDGPLALVLVPTRELAQQISQEINRLLSAWENKKNLNAVSIVGGHSMSDISHTLRNGCDILIATPGRLLDVLDNHLVVLNKIQSLVLDEADRMIDLGFEDQMKSILSHLMADELAARQTMLFTATLSSSVESIAKGYLKNPLH
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain
Protein sequence:
AAAAGDSAASDLLGDNILRSEDPPMSIDLTFHMLRNMIHMAKMEGEREQAQINRNLLDEV

Annotated regions:
phrase: PPMSIDLTFHMLRNMIHMAKMEGEREQAQINRNLLDE
type: DOMAIN
name: CRF
description: Corticotropin-releasing factor

phrase: EDPPMSIDLTFHMLRNMIHMAKMEGEREQAQINRNLLDE
type: DOMAIN
name: CRF
description: Corticotropin-releasing factor

phrase: PPMSIDLTFHMLRNM
type: CONSERVED_SITE
name: Corticotropin-releasing_fac_CS
description: Corticotropin-releasing factor conserved site
Protein sequence:
MSIKSDKWIRRMAEQHGMIEPFEPDQVRESDGRRIVSYGTSSYGYDIRCADEFKIFTNINSTIVDPKNFDEKSFVDFKGDVCIIPPNSFALARTMEYFRIPRTVLTVCLGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGCAQVLFFESDEECETSYKDRGGKYQGQHGVTLPKT

Annotated regions:
phrase: GYDIRCADEFKIFTNINSTIVDPKNFDEKSFVDFKGDVCIIPPNSFALARTMEYFRIPRTVLTVCLGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGCAQVL
type: DOMAIN
name: dUTPase_trimeric
description: dUTPase, trimeric
Protein sequence:
MRPVAPEKDGPRVNEEIRIREVQLIDQDGQNRGVLPTRDALLLAQEAGLDLVEISPNSSPPVCKILDFGRFKYQNQKKASEARKKQKVVEVKEIKLRPGIDTHDYDVKMKAMLRFFEEGDKVKVTLRFRGREMAHQDIGYKLLQKLKEDVTNIAKVEAEPMLEGRQMIMILAPR

Annotated regions:
phrase: KILDFGRFKYQNQ
type: CONSERVED_SITE
name: Translation_initiation_fac3_CS
description: Translation initiation factor 3, conserved site

phrase: VNEEIRIREVQLIDQDGQNRGVLPTRDALLLAQEAGLDLVEISPNSSPPVCKILDFGRFKYQNQKKASE
type: DOMAIN
name: Translation_initiation_fac_3_N
description: Translation initiation factor 3, N-terminal

phrase: VEVKEIKLRPGIDTHDYDVKMKAMLRFFEEGDKVKVTLRFRGREMAHQDIGYKLLQKLKEDVTNIAKVEAEPMLEGRQMIMILA
type: DOMAIN
name: Translation_initiation_fac_3_C
description: Translation initiation factor 3, C-terminal
Protein sequence:
MSHRDSYTMYGTTILCIRQGGSVIIAGDGQVSMGSAIMKTSAKKIKRLAGDSVITGFAGATADAFTLFERLEAKLEKHPGQLMRACVELAKDWRRDKYLRRLEAMMIVADKSVSLIISGGGDVLEPENGIAAIGSGGNFALSAARALCAARDELSLDMTLEYIATAAMAVASEICVYTNNNIIMEKIEE

Annotated regions:
Protein sequence:
MVPGGTMKSLKKDSRLRITPTRLLEASENVKEKKRAKGPEQPTPTIQEEPEPVSNVLQGDDILALAIKKEDLKEQHIPRLTEKEDKRVITQKFIIRKLKPMDPRRKVCHLVARPANPDEATKPLDYSGPGDSFDGSDQILPHHILGSLQDFKRIALARGNTQLAERIPTSPCLMTLISAEGESKQKAPKEEKRPPWAPPPQHNFLKNWQRNTALRKKQQEALSEHLKKPVSELLMHTGETYRRIQEERELIDCTLPTRRDRKSWENSGFWSRLEYLGDEMTGLVMTKTKTQRGLMEPITHIRKPHSIRVETGLPAQRDASYRYTWDRSLFLIYRRKELQRIMEELDFSQQDIDGLEVVGKGWPFSAVTVEDYTVFERSQGSSSEDTAYLGTLASSSDVSMPILGPSLLFCGKPACWIRGSNPQDKRQVGIAAHLTFETLEGEKTSSELTVVNNGTVAIWYDWRRQHQPDTFQDLKKNRMQRFYFDNREGVILPGEIKTFTFFFKSLTAGVFREFWEFRTHPTLLGGAILQVNLHAVSLTQDVFEDERKVLESKLTAHEAVTVVREVLQELLMGVLTPERTPSPVDAYLTEEDLFRHRNPPLHYEHQVVQSLHQLWRQYMTLPAKAEEARPGDKEHVSPIATEKASVNAELLPRFRSPISETQVPRPENEALRESGSQKARVGTKSPQRKSIMEEILVEESPDVDSTKSPWEPDGLPLLEWNLCLEDFRKAVMVLPDENHREDALMRLNKAALELCQKPRPLQSNLLHQ

Annotated regions:
Protein sequence:
MSDSTYKAGFVSIIGRPNVGKSTLLNRILGEKIVAVSDKPQTTRNVIRGILSDETSQIVFVDTPGIHTARTRINRAMVDAAMTVVTGIDLMLLVVDATQKIEETFIKDICSKAGAPIYLVLNKIDQVTPKEKLFTVIEGYTRLYDFPEIIPISAQSGSNIERLVDLVREHLPEGEALFPDDILTDLPEKFIVAELIREKVFRLTNREVPYGTAVVVEAFAERENGLVAINATIMVERDSHKGIIIGKKGVMLKKIGEQARRDIERLLGTKVYLELFVQVQERWTERTAMLRELGYE

Annotated regions:
phrase: VSIIGRPNVGKSTLLNRILGEKIVAVSDKPQTTRNVIRGILSDETSQIVFVDTPGIHTARTRINRAMVDAAMTVVTGIDLMLLVVDATQKIEETFIKDICSKAGAPIYLVLN
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: KAGFVSIIGRPNVGKSTLLNRILGEKIVAVSDKPQTTRNVIRGILSDETSQIVFVDTPGIHTARTRINRAMVDAAMTVVTGIDLMLLVVDATQKIEETFIKDICSKAGAPIYLVLNKIDQVTPKEKLFTVIEGYTRLYDFPEIIPISAQSGSNIERLVDLVREHLP
type: DOMAIN
name: G_ERA_dom
description: Era-type guanine nucleotide-binding (G) domain

phrase: YKAGFVSIIGRPNVGKSTLLNRILGEKIVAVSDKPQTTRNVIRGILSDETSQIVFVDTPGIHTARTRINRAMVDAAMTVVTGIDLMLLVVDATQKIEETFIKDICSKAGAPIYLVLNKIDQVTPKEKLFTVIEGYTRLYDFPEIIPISAQSGSNIERLVDLVREH
type: DOMAIN
name: G_ERA_dom
description: Era-type guanine nucleotide-binding (G) domain

phrase: GFVSIIGRPNVGKSTLLNRILGEKIVAVSDKPQTTRNVIRGILSDETSQIVFVDTPGIHTARTRINRAMVDAAMTVVTGIDLMLLVVDATQKIEETFIKDICSKAGAPIYLVLNKIDQVTPKEKLFTVIEGYTRLYDFPEIIPISAQSGSNIERLVDLV
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: EVPYGTAVVVEAFAERENGLVAINATIMVERDSHKGIIIGKKGVMLKKIGEQARRDIERLLGTKVYLELFVQVQER
type: DOMAIN
name: KH_dom_type_2
description: K Homology domain, type 2

phrase: TNREVPYGTAVVVEAFAERENGLVAINATIMVERDSHKGIIIGKKGVMLKKIGEQARRDIERLLGTKVYLELFVQVQ
type: DOMAIN
name: KH_dom_type_2
description: K Homology domain, type 2
Protein sequence:
MNRIFRNVFFWVLIFLVVVGVIGLLNGPNEEQQQFNVQEFRDALNNGEIDEMTMQPAHGIMRFTGTLTEGDKQFVAQVPDNTDIIATITEQATEQSVLNVAQEEQPSAFVAFLTGIVPFLLIGLFFLFILSQAQGGGGGGRVMNFGKSKAKMYTEEKKKVRFTDVAGADEEKQELVEVVDFLKDPRKFSAVGARIPKGVLLVGPPGTGKTLLARAVAGEAGTPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGANEGIIMIAATNRADILDPALLRPGRFDRQIMVDRPDVRGREEVLKVHSRNKPFDDTVDLKVIAMRTPGFSGADLENLLNEAALVAARDDRKKISMLDVDEATDRVIAGVAKKSRVISEKERNIVAYHESGHTIIGMVLDDADMVHKVTIVPRGQAGGYAVMLPREDRYFMTKPELFDKITGLLGGRVAEEVIFGEVSTGAHNDFQRATGIARKMITEYGMSDKIGPLQFTSGGGQDVFLGRDIGNEQTYSDAIAQEIDEEMQNFINYCYDRAKTILTENRDKLELVAKTLLEVETLDARQIKSLFEDGVMPEPEEDDTNVKVNINSKDEEVDPDSYEEAKQKEEKDKSDDKSYIDDPIMSDNTPPSEDDKKE

Annotated regions:
phrase: IIMIAATNRADILDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: IPKGVLLVGPPGTGKTLLARAVAGEAGTPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGANEGIIMIAATNRADILDPALLRPGRFDRQIMVDRP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: RVISEKERNIVAYHESGHTIIGMVLDDADMVHKVTIVPRGQAGGYAVMLPREDRYFMTKPELFDKITGLLGGRVAEEVIFGEVSTGAHNDFQRATGIARKMITEYGMSDKIGPLQFTSGGGQDVFLGRDIGNEQTYSDAIAQEIDEEMQNFINYCYDRAKTILTENRDKLELVAKTLLEVETLDARQIKS
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: VLLVGPPGTGKTLLARAVAGEAGTPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGANEGIIMIAATNRADILDPALLRPGRFDRQIMV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: FFWVLIFLVVVGVIGLLNGPNEEQQQFNVQEFRDALNNGEIDEMTMQPAHGIMRFTGTLTEGDKQFVAQVPDNTDIIATITEQATEQS
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular

phrase: VDLKVIAMRTPGFSGADLENLLNEAALVAARDDRKKISMLDV
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain
Protein sequence:
MKIDILTLFPEMFSPLEHSIVGKAREKGLLDIQYHNFRENAEKARHVDDEPYGGGQGMLLRAQPIFDSFDAIEKKNPRVILLDPAGKQFDQAYAEDLAQEEELIFICGHYEGYDERIKTLVTDEISLGDYVLTGGELAAMTMIDATVRLIPEVIGKESSHQDDSFSSGLLEYPQYTRPYDYRGMVVPDVLMSGHHEKIRQWRLYESLKKTYERRPDLLEHYQLTVEEEKMLAEIKENKE

Annotated regions:
phrase: GKAREKGLLDIQYHNFRENAEKARHVDDEPYGGGQGMLLRAQPIFDSFDAIEKKNPRVILLDPAGKQFDQAYAEDLAQEEELIFICGHYEGYDERIKTLVTDEISLGDYVLTGGELAAMTMIDATVRLIPEVIGKESSHQDDSFSSGLLEYPQYTRPYDYRGMVVPDVLMSGHHEKIRQWRLYESLKKTYERR
type: DOMAIN
name: tRNA_MeTrfase_TRMD/TRM10
description: tRNA methyltransferase TRMD/TRM10-type domain
Protein sequence:
MSDTLLNPYFGEFGGMYVPEILVPVLKQLEQAFVEAQNDPTFQAEFADLLKNYAGRPTALTLCRNLTKGTKTKLYLKREDLLHGGAHKTNQVLGQILLAKRMGKTRIIAETGAGQHGVATALACAMLDMPCRVYMGAKDVERQSPNVFRMRLMGAEVIPVQKGSCSLKDACCEAMRDWSANYETTHYLLGTAAGPHPFPTIVREFQKMIGEETKRQILEREGRLPDAVIAAVGGGSNAIGMFADFIDESNVRLIGVEPAGKGIETGEHGAPLKHGTTGIYFGMKSPIMQDKDGQIEESYSISAGLDFPSVGPQHAYLNEIGRAEYVSITDEEALNAFQELAKHEGIIPALESSHALAYALKLIKQNPEKEQLLVVNLSGRGDKDIFTVDKILTEKGMK

Annotated regions:
phrase: AGRPTALTLCRNLTKGTKTKLYLKREDLLHGGAHKTNQVLGQILLAKRMGKTRIIAETGAGQHGVATALACAMLDMPCRVYMGAKDVERQSPNVFRMRLMGAEVIPVQKGSCSLKDACCEAMRDWSANYETTHYLLGTAAGPHPFPTIVREFQKMIGEETKRQILEREGRLPDAVIAAVGGGSNAIGMFADFIDESNVRLIGVEPAGKGIETGEHGAPLKHGTTGIYFGMKSPIMQDKDGQIEESYSISAGLDFPSVGPQHAYLNEIGRAEYVSITDEEALNAFQELAKHEGIIPALESSHALAYALKLIKQNPEKEQLLVVN
type: DOMAIN
name: TrpB-like_PALP
description: Tryptophan synthase beta chain-like, PALP domain

phrase: LLHGGAHKTNQVLG
type: CONSERVED_SITE
name: Trp_synth_b_CS
description: Tryptophan synthase, beta chain, conserved site
Protein sequence:
MRPRANVCVGWAACILLVVCLCVLAEGYPTKPENPGEDAPVEELAKYYSALRHYINLITRQRYGKRSNTDVLTPDLLFGEAEIRLQSRYDDPLMG

Annotated regions:
phrase: YYSALRHYINLITRQR
type: CONSERVED_SITE
name: Pancreatic_hormone-like_CS
description: Pancreatic hormone-like, conserved site
Protein sequence:
MSDILREICDTTRAEVARRKAALPLADVTARAEDANAPRGFANALTRTADSGRPALIAEIKKASPSAGLIRPDFNPAVLARAYHAAGATCLSVLTDGPYFQGHADFLIAARAAVPLPVLRKDFMVDPWQVVEARAMGADCILVILAALDDGAAAEIEACAHDWGMDVLAEVHNEEECARALTCLTTPLLGVNNRNLKTLVTDLAVTERLAKMVPADRVLVAESGLRTRKDLDRMTAVGARRFLIGEHFMRQPDVGDAVRALIG

Annotated regions:
phrase: FANALTRTADSGRPALIAEIKKASPSAGLIRPDFNPAVLARAYHAAGATCLSVLTDGPYFQGHADFLIAARAAVPLPVLRKDFMVDPWQVVEARAMGADCILVILAALDDGAAAEIEACAHDWGMDVLAEVHNEEECARALTCLTTPLLGVNNRNLKTLVTDLAVTERLAKMVPADRVLVAESGLRTRKDLDRMTAVGARRFLIGEHFMRQPDVGDAVRA
type: DOMAIN
name: Indole-3-glycerol_P_synth_dom
description: Indole-3-glycerol phosphate synthase domain

phrase: DILREICDTTRAEVARRKAALPLADVTARAEDANAPRGFANALTRTADSGRPALIAEIKKASPSAGLIRPDFNPAVLARAYHAAGATCLSVLTDGPYFQGHADFLIAARAAVPLPVLRKDFMVDPWQVVEARAMGADCILVILAALDDGAAAEIEACAHDWGMDVLAEVHNEEECARALTCLTTPLLGVNNRNLKTLVTDLAVTERLAKMVPADRVLVAESGLRTRKDLDRMTAVGARRFLIGEHFMRQPDVGDAVRALI
type: DOMAIN
name: Indole-3-glycerol_P_synth_dom
description: Indole-3-glycerol phosphate synthase domain

phrase: LREICDTTRAEVARRKAALPLADVTARAEDANAPRGFANALTRTADSGRPALIAEIKKASPSAGLIRPDFNPAVLARAYHAAGATCLSVLTDGPYFQGHADFLIAARAAVPLPVLRKDFMVDPWQVVEARAMGADCILVILAALDDGAAAEIEACAHDWGMDVLAEVHNEEECARALTCLTTPLLGVNNRNLKTLVTDLAVTERLAKMVPADRVLVAESGLRTRKDLDRMTAVGARRFLIGEHFMRQPDVGDAVRA
type: DOMAIN
name: Indole-3-glycerol_P_synth_dom
description: Indole-3-glycerol phosphate synthase domain

phrase: LIAEIKKASPSAGLIRPD
type: CONSERVED_SITE
name: Indole-3-GlycerolPSynthase_CS
description: Indole-3-glycerol phosphate synthase, conserved site
Protein sequence:
MTHSVEDIKSTSRRLRGSLEQSLADPVTGALREDDQTLIKYHGSYQQDDRDIRDERRRQKLEPAYQFMIRTRTPGGVISPSQWLALDGIATRYANHSLRITTRQAFQFHGVIKRELKATMQAINATLIDTLAACGDVNRNVQVAANPLLSQAHATLYADAARVSEHLLPNTRAYYEIWLDEERVSGSGAEDEPIYGDRYLPRKFKIGFAAPPHNDVDVFANDLGFIAILREGQLLGYNVSIGGGMGASHGDAETWPRVANVIGFVTGDQLLDIATAVVTTQRDLGNRAVRKRARFKYTIDDHGLDTIVAEIERRAGFSLQPAQPFAFAHNGDRYGWVEGEQGDWHLTLSLPAGRIADTDTAAHLSGLRAIAQLQMGEFRMTPNQNLVIAGVPAEQRAQIDQLVAQYGLDAGNLAPTALARGAMACVALPTCGLAMAEAERYLPDFSAALQPLLERHGLAQTPIVLRLSGCPNGCSRPYLAEIALVGKAPGRYNLMLGGDRRGQRLNTLYRENINEADILAALEPLLARYAAERDRHTDEGFGDFLHRSGLIALPPYPTHRHLDLELLA

Annotated regions:
phrase: SEHLLPNTRAYYEIWLDEERVSGSGAEDEPIYGDRYLPRKFKIGFAAPPHNDVDVFANDLGFIAILREGQLLGYNVSIGGGMGASHGDAETWPRVANVIGFVTGDQLLDIATAVVTTQRDLGNRAVRKRARFKYTIDDHGLDTIVAEIERRA
type: DOMAIN
name: NO2/SO3_Rdtase_4Fe4S_dom
description: Nitrite/sulphite reductase 4Fe-4S domain

phrase: GEQGDWHLTLSLPAGRIADTDTAAHLSGLRAIAQLQMGEFRMTPNQNLVIAGVPAEQRAQIDQLV
type: DOMAIN
name: NiRdtase/SiRdtase_haem-b_fer
description: Nitrite/Sulfite reductase ferredoxin-like domain

phrase: PAYQFMIRTRTPGGVISPSQWLALDGIATRYANHSLRITTRQAFQFHGVIKRELKATMQAIN
type: DOMAIN
name: NiRdtase/SiRdtase_haem-b_fer
description: Nitrite/Sulfite reductase ferredoxin-like domain

phrase: SGCPNGCSRPYLAEIA
type: BINDING_SITE
name: NO2/SO3_Rdtase_FeS/sirohaem_BS
description: Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site

phrase: RGAMACVALPTCGLAMAE
type: BINDING_SITE
name: NO2/SO3_Rdtase_FeS/sirohaem_BS
description: Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site

phrase: SGCPNGCSRPYLAEIALV
type: BINDING_SITE
name: NO2/SO3_Rdtase_FeS/sirohaem_BS
description: Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site
Protein sequence:
MIAIADILQAGEKLTAVAPFLAGIQNEEQYTQALELVDHLLLNDPENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFID

Annotated regions:
phrase: IRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPA
type: DOMAIN
name: Cro/C1-type_HTH
description: Cro/C1-type helix-turn-helix domain

phrase: IRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPAL
type: DOMAIN
name: Cro/C1-type_HTH
description: Cro/C1-type helix-turn-helix domain

phrase: IRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPAL
type: DOMAIN
name: Cro/C1-type_HTH
description: Cro/C1-type helix-turn-helix domain

phrase: VIRTLMDQYGLTLSDLPEIGSKSMVSRVLSGKRKLTLEHAKKLATRFGISPAL
type: DOMAIN
name: Cro/C1-type_HTH
description: Cro/C1-type helix-turn-helix domain
Protein sequence:
MPNQLPADSVGLVTPQTLHFSEPLELACGISLNEYDLVYETYGQLNAAKSNAVLICHALSGHHHAAGYHRLEDKRPGWWDAYIGPGKPIDTNKFFVVALNNLGGCHGSTGPRSINPATGNVWGADFPMLRVRDWVASQARLADALGIDTWAAIIGGSLGGMQVMRWSIQYPQRVRYAVVIASAMKLSAQNIAFNEAARKAIISDPNFHNGDYLAHNTLPKNGLAVARMIGHITYLSDYAMGEKFGRDLRSGSFELGIAEPVEFQIESYLRYQGDSFAVSFDANSYIRITKALDYFDLAREYSDDPVLAFQGAQAKFLVVSFSTDWRFAPQRSREIVDALVGANKAVTYAEIESKHGHDAFLLPDARYEQVFKRYLASVEV

Annotated regions:
phrase: NAVLICHALSGHHHAAGYHRLEDKRPGWWDAYIGPGKPIDTNKFFVVALNNLGGCHGSTGPRSINPATGNVWGADFPMLRVRDWVASQARLADALGIDTWAAIIGGSLGGMQVMRWSIQYPQRVRYAVVIASAMKLSAQNIAFNEAARKAIISDPNFHNGDYLAHNTLPKNGLAVARMIGHITYLSDYAMGEKFGRDLRSGSFELGIAEPVEFQIESYLRYQGDSFAVSFDANSYIRITKALDYFDLAREYSDDPVLAFQGAQAKFLVVSFSTDWRFAPQRSREIVDALVGANKAVTYAEIESKHGHDA
type: DOMAIN
name: AB_hydrolase_1
description: Alpha/beta hydrolase fold-1
Protein sequence:
MGNLKSVGQEPGPPCGLGLGLGLGLWGQQGPASPTADSSPMTSPLGPSSPPLTKPPEGPKFPRVKNWEVGSITYDTLSAQAQQEGPCTPRRCLGSLVFPRKLQSRPSQDPPPTEQLLSQARDFINQYYSSIKRSGSQAHEQSTYQLRESELVFGAKQAWRNAPRCVGRIQWGKLQVFDARDCNSAQEMFTYICNHIKYATNRGNLRSAITVFPQRAPGRGDFRIWNSQLVRYAGYRQQDAPVRGDPANVEITELCIQHGWTPGNGRFDVLPLLLQAPDEPPELFALPPELVLEVPLEHPTLEWFAALGLPWYALPAGRNMLLEMGGAESRANFGGSGTTSLGQRNACVLDVAVCMDLDTRTTSSLWKDKAAVEINLAVLHSYQLAKVTIVDHHAATASFMKHLENEQKARGGCPADWAWIVPPISGSLTPVFHQEMVNYVLSPAFHYQPDPWRGSGSKGAGITRKKTFKEVANAVKISASLMGTVMAKRVKATILYGSETGRAQSYAQQLGRLFRKAFDPRVLCMDEYDVVSLEHETLVLVVTSTFGNGDPPENGESFAAALMEMSGPYNSSPRPEQHRSYKMRFNSVSCSDPLVSSWRRKRKESSNTDSAGALGTLRFCVFGLGSRAYPHFCAFARAVDTRLALGGERLLQLGQGDELCGQEEAFRGWAQAAFQASCETFCVGEDAKAAARDIFSAKRSWKRQRYRLSTQAEGLQLLPGLIHVHRRKMFQAAILSVENLQSSQDGLRYQPGDHIGICPPNRPGLVEA

Annotated regions:
phrase: RCVGRIQ
type: DOMAIN
name: NOS_N
description: Nitric oxide synthase, N-terminal

phrase: ILYGSETGRAQSYAQQLGRLFRKAFDPRVLCMDEYDVVSLEHETLVLVVTSTFGNGDPPENGESFAAALMEMSGPYNSSPRPEQHRSYKMRFNSVSCSDPLVSSWRRKRKESSNTDSAGALGTLRFCVFGLGSRAYPHFCAFARAVDTRLALGGERLLQLGQGDELCGQEEAFRG
type: DOMAIN
name: Flavodoxin/NO_synth
description: Flavodoxin/nitric oxide synthase

phrase: ATILYGSETGRAQSYAQQLGRLFRKAFDPRVLCMDEYDVVSLEHETLVLVVTSTFGNGDPPENGESFAAALMEMSGPYNSSPRPEQHRSYKMRFNSVSCSDPLVSSWRRKRKESSNTDSAGALGTLRFCVFGLGSRAYPHFCAFARAVDTRLALGGERLLQLGQGDELCGQEEAFRGWAQAA
type: DOMAIN
name: Flavodoxin/NO_synth
description: Flavodoxin/nitric oxide synthase

phrase: LVVTSTFGNGD
type: DOMAIN
name: Flavdoxin-like
description: Flavodoxin-like

phrase: VDTRLALGGERLLQLGQGD
type: DOMAIN
name: Flavdoxin-like
description: Flavodoxin-like

phrase: TLRFCVFGLG
type: DOMAIN
name: Flavdoxin-like
description: Flavodoxin-like

phrase: TILYGSETGRAQS
type: DOMAIN
name: Flavdoxin-like
description: Flavodoxin-like

phrase: TEQLLSQARDFINQYYSSIKRSGSQAHEQSTYQLRESELVFGAKQAWRNAPRCVGRIQWGKLQVFDARDCNSAQEMFTYICNHIKYATNRGNLRSAITVFPQRAPGRGDFRIWNSQLVRYAGYRQQDAPVRGDPANVEITELCIQHGWTPGNGRFDVLPLLLQAPDEPPELFALPPELVLEVPLEHPTLEWFAALGLPWYALPAGRNMLLEMGGAESRANFGGSGTTSLGQRNACVLDVAVCMDLDTRTTSSLWKDKAAVEINLAVLHSYQLAKVTIVDHHAATASFMKHLENEQKARGGCPADWAWIVPPISGSLTPVFHQEMVNYVLSPAFHYQPDP
type: DOMAIN
name: NOS_N
description: Nitric oxide synthase, N-terminal
Protein sequence:
MSKPPSDLPRRPPAAFAYEDEAAEPGDNGRQQQGRRRPESFSEDIVLTPDEEDPFINPDRDPSAVAVATPRKRRTSFGKIALAAFGILLSLGIGLWTDRLIRDLFSRADWLGYAALGVLAIGILAVLALVIREAAGMMRLAAVQTIKAEAEAAILETRPAKARAVVSRLTTLLAANPETSKGRATLKATEGEVIDPPHLIALAERELLAPLDRKARALIVNASKRVSIVTAVSPRAIVDLLYVLYESVRLIRAMAELYGGRPGTLGMFRLLRDVLAHLAVTGSIAVGDSLVQQVLGHGLASKLSARLGEGVINGLMTARIGIAAMDLCRPLAFRAVKRPGIGDFIGDLTPSMSPRGNNP

Annotated regions:
Protein sequence:
MTLIVTGAAGFIGSNLVKALNERGEDGIIAVDNLTRADKFKNLVDCEIDDYLDKTEFVERFARGDFGKVRAIFHEGACSDTMETDGRYMMDNNFRYSRAVLDACLAQGVQFLYASSAATYGGSTRFVEEREVEAPLNVYGYSKFLFDQVIRRVLPTAKSQIAGFRYFNVYGPRESHKARMASVAFHNFNQFRAEGKVKLFGEYNGYAAGEQTRDFVSVEDLVKVNLHFFDHPEKSGIFNLGSGRAQPFNDIASTVVNALRALDGEPALSLAELVQRGLIEYIPFPDALRGKYQCFTQADLTKLRAAGYDAPFLTVQEGVDRYVRWLSGQV

Annotated regions:
phrase: IVTGAAGFIGSNLVKALNERGEDGIIAVDNLTRADKFKNLVDCEIDDYLDKTEFVERFARGDFGKVRAIFHEGACSDTMETDGRYMMDNNFRYSRAVLDACLAQGVQFLYASSAATYGGSTRFVEEREVEAPLNVYGYSKFLFDQVIRRVLPTAKSQIAGFRYFNVYGPRESHKARMASVAFHNFNQFRAEGKVKLFGEYNGYAAGEQTRDFVSVEDLVKVNLHFFDHPEKSGIFNL
type: DOMAIN
name: Epimerase_deHydtase
description: NAD-dependent epimerase/dehydratase
Protein sequence:
MIINIGELARVSDKSRSKAAGKLVEVVSIQLKHGVKDEDSEVKVRIIPKDGKSKPQFGYVRAKFLESAFLKAVPAKGIETIDTSHVGVDFKWKLGQAIKFIAPCEFNFIKDDGRVVYTRAMCGYITDQWVEDGVKLYNVVFLGTYKVIPESWIKHYSNALYA

Annotated regions:
Protein sequence:
MTLQQQIIKALGAKPQINAEEEIRRSVDFLKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRQETGNESLQFIAVRLPYGVQADEQDCQDAIAFIQPDRVLTVNIKGAVLASEQALREACIELSDFVRGNEKARERMKAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQLLAALGCPEHLYKKAPTADLEDDRPSLPDEVALGVTYDNIDDYLEGKNVPQQVARTIENWYLKTEHKRRPPITVFDDFWKK

Annotated regions:
phrase: IRRSVDFLKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRQETGNESLQFIAVRLPYGVQADEQDCQDAIAFIQPDRVLTVNIKGAVLASEQALREACIELSDFVRGNEKARERMKAQYSIAGMTSGVVVGTDHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQLLAALGCPEHLYKKAPTADLEDDRPSLPDEVALGVTYDNIDDYLEGKNVPQQVARTIENWYLKTEHKRRP
type: DOMAIN
name: NAD/GMP_synthase
description: NAD/GMP synthase
Protein sequence:
MKNNYNLRSIAAIAIGQVLDQGQSLSTVLPSLQKTISDKDRALLQELCFGTLRVLPQLEWCIQQLMAKPMTGKQRTLHYLLMVGLYQLLYTRIPAHAVLAETVEGAVALKRPQLKGLINGVLRQFQRQQEELLQRAANNDSRYLHPSWLLKRIQQAYPAQWEQIIDANNQKPPMWLRVNRLHHTREDYLQLMEQAGIAAEPHAEYRDAVRLLAPCAVTDLPGFADGWVTVQDASAQGCVDLLDPQDGEQILDLCAAPGGKTTHILEAAPKAHVMAVDIDEQRLKRVKENLQRLRLHAEVKQGDGRTPQQWCGDKQFDRILLDAPCSATGVIRRHPDIKWLRRDSDIAELAALQAEIIEAIWPHLKSGGVMVYATCSILPAENAEQVSAFLQRHADARLVETGNQQQPGRQNLPHPEDGDGFFYAKLIKM

Annotated regions:
phrase: LRSIAAIAIGQVLDQGQSLSTVLPSLQKTISDKDRALLQELCFGTLRVLPQLEWCIQQLMAKPMTGKQRTLHYLLMVGLYQLLYTRIPAHAVLAETVEGAVALKRPQLKGLINGVLRQFQ
type: DOMAIN
name: NusB_RsmB_TIM44
description: NusB/RsmB/TIM44

phrase: NLRSIAAIAIGQVLDQGQSLSTVLPSLQKTISDKDRALLQELCFGTLRVLPQLEWCIQQLMAKPMTGKQRTLHYLLMVGLYQLLYTRIPAHAVLAETVEGAVALKRPQLKGLINGVLRQFQRQ
type: DOMAIN
name: RsmB-like_N
description: Ribosomal RNA small subunit methyltransferase B-like, N-terminal domain

phrase: LLDPQDGEQILDLCAAPGGKTTHILEAAPKAHVMAVDIDEQRLKRVKENLQRLRLHAEVKQGDGRTPQQWCGDKQFDRILLDAPCSATGVIRRHPDIKWLRRDSDIAELAALQAEIIEAIWPHLKSGGVMVYATCSILPAENAEQVSAFLQRHADARLVETGNQQQPGRQNLPHPEDGDGFFYAK
type: DOMAIN
name: MeTrfase_RsmB-F_NOP2_cat
description: SAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic core

phrase: FDRILLDAPCS
type: CONSERVED_SITE
name: RsmB/NOL1/NOP2-like_CS
description: RsmB/NOL1/NOP2-like, conserved site

phrase: IIDANNQKPPMWLRVNRLHHTREDYLQLMEQAGIAAEPHAEYRDAVRLLAPCAVTDLPGFADGWVTVQDASAQGCVDLLDPQDGEQILDLCAAPGGKTTHILEAAPKAHVMAVDIDEQRLKRVKENLQRLRLHAEVKQGDGRTPQQWCGDKQFDRILLDAPCSATGVIRRHPDIKWLRRDSDIAELAALQAEIIEAIWPHLKSGGVMVYATCSILPAENAEQVSAFLQRHADARLVETGNQQQPGRQNLPHPEDGDGFFYAKLIK
type: DOMAIN
name: MeTrfase_RsmB-F_NOP2_dom
description: SAM-dependent methyltransferase RsmB-F/NOP2-type domain

phrase: HPSWLLKRIQQAYPAQWEQIIDANNQKPPMWLRVNRLHHTREDYLQLMEQAGIAAEPHAEYRDAVRLLAPCAV
type: DOMAIN
name: RsmB-like_ferredoxin
description: Ribosomal RNA small subunit methyltransferase B-like, ferredoxin-like domain
Protein sequence:
MALVPLRLLLDHAAENGYGIPAFNVNNLEQIQAILKAAVETDSPVILQASRGARAYAGENFLRHLILAAVETYPHIPIVMHQDHGNAPATCYSAIKNNFTSVMMDGSLEADAKTPASFEYNVNVTREVVNVAHALGVSVEGELGCLGSLETGAGEAEDGHGFEGTLDHSQLLTDPDEAVEFVEATQVDALAVAIGTSHGAYKFTRKPTGEILAISRIEEIHRRLPNTHLVMHGSSSVPEDLLALINQYGGAIPETYGVPVEEIQKGIKSGVRKVNIDTDNRLAITAAVREACAKKPEEFDPRHFLKPSITYMQKVCAERYQQFGTAGNASKIKQISLEDFAAKYAKGELNVVTKAAAKV

Annotated regions:
Protein sequence:
MLFKKDRKQETAYFSDSNGQQKNRIQLTNKHADVKKQLKMVRLGDAELYVLEQLQPLIQENIVNIVDAFYKNLDHESSLMDIINDHSSVDRLKQTLKRHIQEMFAGVIDDEFIEKRNRIASIHLRIGLLPKWYMGAFQELLLSMIDIYEASITNQQELLKAIKATTKILNLEQQLVLEAFQSEYNQTRDEQEEKKNLLHQKIQETSGSIANLFSETSRSVQELVDKSEGISQASKAGTVTSSTVEEKSIGGKKELEVQQKQMNKIDTSLVQIEKEMVKLDEIAQQIEKIFGIVTGIAEQTNLLSLNASIESARAGEHGKGFAVVANEVRKLSEDTKKTVSTVSELVNNTNTQINIVSKHIKDVNELVSESKEKMTQINRLFDEIVHSMKISKEQSGKIDVDLQAFLGGLQEVSRAVSHVAASVDSLVILTEE

Annotated regions:
phrase: VEEKSIGGKKELEVQQKQMNKIDTSLVQIEKEMVKLDEIAQQIEKIFGIVTGIAEQTNLLSLNASIESARAGEHGKGFAVVANEVRKLSEDTKKTVSTVSELVNNTNTQINIVSKHIKDVNELVSESKEKMTQINRLFDEIVHSMKISKEQSGKIDVDLQAFLGGLQEVSRAVSHVA
type: DOMAIN
name: MCPsignal_dom
description: Methyl-accepting chemotaxis protein (MCP) signalling domain

phrase: KKNLLHQKIQETSGSIANLFSETSRSVQELVDKSEGISQASKAGTVTSSTVEEKSIGGKKELEVQQKQMNKIDTSLVQIEKEMVKLDEIAQQIEKIFGIVTGIAEQTNLLSLNASIESARAGEHGKGFAVVANEVRKLSEDTKKTVSTVSELVNNTNTQINIVSKHIKDVNELVSESKEKMTQINRLFDEIVHSMKISKEQSGKIDVDLQAFLGGLQEVSRAVSHVAASVDSLVILTE
type: DOMAIN
name: MCPsignal_dom
description: Methyl-accepting chemotaxis protein (MCP) signalling domain

phrase: KQLKMVRLGDAELYVLEQLQPLIQENIVNIVDAFYKNLDHESSLMDIINDHSSVDRLKQTLKRHIQEMFAGVIDDEFIEKRNRIASIHLRIGLLPKWYMGAFQELLLSMIDIYEASITNQQELLKAIKATTKILNLEQQLVLEA
type: DOMAIN
name: Protoglobin_sensor_dom
description: Protoglobin, globin sensor domain

phrase: QKIQETSGSIANLFSETSRSVQELVDKSEGISQASKAGTVTSSTVEEKSIGGKKELEVQQKQMNKIDTSLVQIEKEMVKLDEIAQQIEKIFGIVTGIAEQTNLLSLNASIESARAGEHGKGFAVVANEVRKLSEDTKKTVSTVSELVNNTNTQINIVSKHIKDVNELVSESKEKMTQINRLFDEIVHSMKISKEQSGKIDVDLQAFLGGLQEVSRAVSHV
type: DOMAIN
name: MCPsignal_dom
description: Methyl-accepting chemotaxis protein (MCP) signalling domain

phrase: HADVKKQLKMVRLGDAELYVLEQLQPLIQENIVNIVDAFYKNLDHESSLMDIINDHSSVDRLKQTLKRHIQEMFAGVIDDEFIEKRNRIASIHLRIGLLPKWYMGAFQELLLSMIDIYEASITNQQELLKAIKATTKILNLEQQLVLEAFQSEY
type: DOMAIN
name: Globin-sensor_dom
description: Globin-sensor domain