nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MIKLTPRQAEILGFIKRCLEDNGFPPTRAEIAQELGFKSPNAAEEHLKALARKGAIEMTPGASRGIRIPGFEARPDESSLPVIGRVAAGAPILAQQHIEESCNINPSFFHPSANYLLRVHGMSMKDVGILDGDLLAVHTTREARNGQIVVARIGDEVTVKRFKREGSKVWLLAENPDFAPIEVDLKDQELVIEGLSVGVIRR

Annotated regions:
phrase: MIKLTPRQAEILGFIKRCLEDNGFPPTRAEIAQELGFKSPNAAEEHLKALARKGAIEMTPGASR
type: DOMAIN
name: LexA_DNA-bd_dom
description: LexA repressor, DNA-binding domain

phrase: PVIGRVAAGAPILAQQHIEESCNINPSFFHPSANYLLRVHGMSMKDVGILDGDLLAVHTTREARNGQIVVARIGDEVTVKRFKREGSKVWLLAENPDFAPIEVDLKDQELVIE
type: DOMAIN
name: Peptidase_S24_S26A/B/C
description: Peptidase S24/S26A/S26B/S26C

phrase: YLLRVHGMSMKDVGILDGDLLAVHTTREARNGQIVVARIGDEVTVKRFKREGSKVWLLAENPDFAPIEVDLKDQEL
type: DOMAIN
name: LexA-like
description: LexA-like
Protein sequence:
MSEHVLVLGTHNQKKRQELEQLLAPLGLSLLTLSDVEDAIEVEETGTTFSENAALKASQQAQNLGMWVMGEDSGISVVALNNEPGVYSARYSAPGATDQRNNEKVLAELGNTPLEKRTAFYTCHMAISDPTGQIRATAEDYCYGRIRFEPSGENGFGYDPLFEIPEYHRTFGELGPSIKKVLSHRSRAIRKITAQICELMATGGL

Annotated regions:
Protein sequence:
MPDLLIELRSEEIPARMQRKAAGDLKKLVTDALVEAGLTYEGAREYWTPRRLTLDIRGLNARSADVREERKGPRTDANEKAIEGFLRAAGLSSIGDAHVHSDPKKGDFYVAHIVKPGRDAEDIVAEVMPAIIRDFPWPKSMRSGAASAKPGSLRWVRPLQSIVCTFGAETEETRVIPFAVDGITASNITYGHRFHAPEAIMVRRFADYADKLEKAKVVLDAERRKEIIGADARNIAFANGLELVEDEGLLEEVTGLVEWPRVLMGSFEESYLEIPSEIIRLTIKTNQKCFVTRQPGAETLSNRFILVSNIEAKDGGKEIVHGNGKVVRARLSDAAHFWKRDQGDLPDLETLKPSAEKFGLDLGKPLDQRMAKLDALNVTFHAKLGTQGERVARIRSIALALAEVTGADQALVERSVVLAKADLRTEAVGEFPELQGIMGHKYAVLQGEDAAVANAIEDHYKPQGPSDRVPTDAVSAAVALADKLDTLAGFWAIDEKPTGSKDPYALRRAALGVIRLILEGRTRLPLLPFFDVALKALRTQRPDLTGDIAADLLAFFHDRLKVYLRDLGARYDLIDAVLTSEADDLLMIARRVEALTAFITAEEGKNLLAGTKRATQILAAEEKKGTEVADQVDERLFRLDAERTLHASIKLASDDAREAIGKEDFRSAMAALSKLREPVDVFFNDVLVNDEDRAIRANRLALLGLIRSATGEVADFSKISG

Annotated regions:
phrase: TKRATQILAAEEKKGTEVADQVDERLFRLDAERTLHASIKLASDDAREAIGKEDFRSAMAALSKLREPVDVFFNDVLVNDEDRAIRANRLALLGLIR
type: DOMAIN
name: DALR_anticod-bd
description: DALR anticodon binding
Protein sequence:
MENKNVIQKMREKTPLIHCITNYVTINDCANILLSFGASPAMCEAYDEVYDFVSISSALYINLGTLTKEQETAAVLASISAKNHNVPVVIDPVGCPAIKRKVEVINRMAEVGRIDIIKGNIGEIKFLAGMDSETRGVDSLDNGENALDACTQLAKKYNCIVAATGEKDFVSDGKRGSVIKNGTEMLTKVTGAGCMLGALCAATCANFEDKLVSTTAAILSMNIAGEKAYEKAQLPGSFRIALIDNIYMISDEEIWERGNVEWK

Annotated regions:
Protein sequence:
MPAEGACDAASLMTLTATLSDVTGLANLLKSVAIQTHAVVIASSSGLEIITELNRTLQAHAYLYSHMFDSYRFENAQDDVRGSTSLQARSRPKKRSKLTSKHAETADSQSSAASSDHESGQSQAHTKKRFRANSHSYAQEADRVHDEPDSVSFEVNLQTWISCLNIFGGVGPSRPHSSSSGLPGFRPEQGSAEAPPGGRGYQRTRYGVADAYGAERGTSVERGFDRNPFSSSAKATRMKLSYQGHGNPLVLELEQDANVLTRVSMSTYEPSFLTDMVFEPQNMVAQVIVASELMQSAFTEIDASCKKLSILITSPHSLSTYDGDQRTEAPAPTNRNTSASMLKFRAISDTGSSEMEFPASLTSSDPTGVIEKFVALPGSSEQWYDFTLLSRTMSVLRSSIKTSLRMDEAGLISFQFMMPKYRRAAAAGAPLTNAAAGQAAHEDEQDAFCEFLCCPLDTSTLIV

Annotated regions:
Protein sequence:
MPPKTPRKTAATAAAAAAEPPAPPPPPPPEEDPEQDSGPEDLPLVRLEFEETEEPDFTALCQKLKIPDHVRERAWLTWEKVSSVDGVLGGYIQKKKELWGICIFIAAVDLDEMSFTFTELQKNIEISVHKFFNLLKEIDTSTKVDNAMSRLLKKYDVLFALFSKLERTCELIYLTQPSSSISTEINSALVLKVSWITFLLAKGEVLQMEDDLVISFQLMLCVLDYFIKLSPPMLLKEPYKTAVIPINGSPRTPRRGQNRSARIAKQLENDTRIIEVLCKEHECNIDEVKNVYFKNFIPFMNSLGLVTSNGLPEVENLSKRYEEIYLKNKDLDARLFLDHDKTLQTDSIDSFETQRTPRKSNLDEEVNVIPPHTPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESILKRVKDIGYIFKEKFAKAVGQGCVEIGSQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTSQNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQSKDREGPTDHLESACPLNLPLQNNHTAADMYLSPVRSPKKKGSTTRVNSTANAETQATSAFQTQKPLKSTSLSLFYKKVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNSVFMQRLKTNILQYASTRPPTLSPIPHIPRSPYKFPSSPLRIPGGNIYISPLKSPYKISEGLPTPTKMTPRSRILVSIGESFGTSEKFQKINQMVCNSDRVLKRSAEGSNPPKPLKKLRFDIEGSDEADGSKHLPGESKFQQKLAEMTSTRTRMQKQKMNDSMDTSNKEEK

Annotated regions:
phrase: TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESILKRVKDIGYIFKEKFAKAVGQGCVEIGSQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTSQNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDL
type: DOMAIN
name: RB_A
description: Retinoblastoma-associated protein, A-box

phrase: MSFTFTELQKNIEISVHKFFNLLKEIDTSTKVDNAMSRLLKKYDVLFALFSKLERTCELIYLTQPSSSISTEINSALVLKVSWITFLLAKGEVLQMEDDLVISFQLMLCVLDY
type: DOMAIN
name: RB_N
description: Retinoblastoma-associated protein, N-terminal

phrase: ILQYASTRPPTLSPIPHIPRSPYKFPSSPLRIPGGNIYISPLKSPYKISEGLPTPTKMTPRSRILVSIGESFGTSEKFQKINQMVCNSDRVLKRSAEGSNPPKPLKKLRFDIEGSDEADGSKHLPGESKFQQKLAEMTSTRTRMQKQKMNDSMDTSN
type: DOMAIN
name: RB_C
description: Retinoblastoma-associated protein, C-terminal

phrase: ILQYASTRPPTLSPIPHIPRSPYKFPSSPLRIPGGNIYISPLKSPYKISEGLPTPTKMTPRSRILVSIGESFGTSEKFQKINQMVCNSDRVLKRSAEGSNPPKPLKKLRFDIEGSDEADGSKHLPGESKFQQKLAEMTSTRTRMQKQKMNDSMDTSNKE
type: DOMAIN
name: RB_C
description: Retinoblastoma-associated protein, C-terminal

phrase: LRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNSVF
type: DOMAIN
name: Cyclin-like_dom
description: Cyclin-like domain

phrase: SLSLFYKKVYRLAYLRLNTLCERLLSEHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNIDLKFKIIVTAYKDLPHAVQETFKRVLIKEEEYDSIIVFYNSVFMQRL
type: DOMAIN
name: RB_B
description: Retinoblastoma-associated protein, B-box

phrase: TPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESILKRVKDIGYIFKEKFAKAVGQGCVEIGSQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIFHMSLLACALEVVMATYSRSTSQNLDSGTDLSFPWILNVLNLKAFDFYKVIESFIKAEGNLTREMIKHLERCEHRIMESLAWLSDSPLFDL
type: DOMAIN
name: RB_A
description: Retinoblastoma-associated protein, A-box

phrase: IFIAAVDLDEMSFTFTELQKNIEISVHKFFNLLKEIDTSTKVDNAMSRLLKKYDVLFALFSKLERTCELIYLTQPSSSISTEINSALVLKVSWITFLLAKGEVLQMEDDLVISFQLMLCVLDYFIK
type: DOMAIN
name: RB_N
description: Retinoblastoma-associated protein, N-terminal
Protein sequence:
MKLCATSSEPARAAWPLSEPALAYFPDARSASDRDLAAGAYSPGVAMEHIPVLLDRCVELLTPALTRRNPDGRGAVLVDATLGAGGHAHRFLSDLPGLHLIGLDRDPQALQIAGERLAPFGDRVSLVRTRYDGIDDALAQTGVAEVSGFLFDLGVSSMQLDRTERGFSYSADAPLDMRMDSDAPLTAADVVNTFAEKDITRILREFGEERFAARIAKHIVRRRPLNTTGELVELLYDAIPAPARRTGGHPAKRTFQALRIAVNSELDSLRAAIPAALGALETGGRIVVMAYQSLEDRIVKTEFAAATASRTPPGLPVELPGHEPEFVALTRGAERATPEEIERNPRSAPVRLRALEKVAGRPTTARRDAR

Annotated regions:
Protein sequence:
MMPVDDLQEIPLSKDTTEKSKHTVRAAGAVLWRDASEHGGTTGHPATVEVAVIHRPRYDDWSLPKGKLDQGETEPVAAAREIHEETGHTAVLGRRLGRVTYPIPQGTKRVWYWAAKSTGGDFSPNDEVDKLVWLPVDAAMDQLQYPDDRKVLRRFVKRPVDTKTVLVVRHGTAGRRSRYKGDDRKRPLDKRGRAQAEALVAQLMAFGATTLYAADRVRCHQTIEPLAQELDQLIHNEPLLTEEAYAADHKAARKRLLEIAGRPGNPVICTQGKVIPGLIEWWCERAKVRPETTGNRKGSTWVLSLSDGELVGADYLSPPDEK

Annotated regions:
phrase: WSLPKGKLDQGETE
type: DOMAIN
name: Nudix_hydrolase
description: NUDIX hydrolase

phrase: PVAAAREIHEETGHT
type: DOMAIN
name: Nudix_hydrolase
description: NUDIX hydrolase

phrase: GKLDQGETEPVAAAREIHEET
type: CONSERVED_SITE
name: NUDIX_hydrolase_CS
description: NUDIX hydrolase, conserved site

phrase: VAVIHRPRYDDWSLPKGKLDQGETEPVAAAREIHEETGHTAVLGRRLGRVTYPIPQGTKRVWYWAAKSTGGDFSPNDEVDKLVWLPVDAAMDQLQYPDDRKVLRR
type: DOMAIN
name: NUDIX_hydrolase_dom
description: NUDIX hydrolase domain

phrase: HTVRAAGAVLWRDASEHGGTTGHPATVEVAVIHRPRYDDWSLPKGKLDQGETEPVAAAREIHEETGHTAVLGRRLGRVTYPIPQGTKRVWYWAAKSTGGDFSPNDEVDKLVWLPVDAAMDQLQYPDDRKVLRRF
type: DOMAIN
name: NUDIX_hydrolase_dom
description: NUDIX hydrolase domain
Protein sequence:
MAAAIRHDWQHDELQALFDLPFPELLFRAAAVHREHFDPAQVQVSTLLSVKTGGCPEDCAYCPQAQRYNTGVNAQKLMETDAVLAKARQAKAAGASRFCMGAAWRSPKDRDIPKVAAMIAGVKALGLETCATLGMLSGGQARALKDAGLDYYNHNLDTAPDYYDSIIHTRQYQDRLDTLEHVRDAGLKTCCGGIVGMGETRAQRVGLLLALATLPAHPDSVPINKLVQVAGTPLHGSAELDPFEFVRMIAVARIVMPRSMVRLSAGREAMSDELQALCFVAGANSIFYGDKLLTTGNPESERDLALFARLGLQPMAVQVDAEGHDHGGTVHADISADAPGCGCAHAA

Annotated regions:
phrase: STLLSVKTGGCPEDCAYCPQAQRYNTGVNAQKLMETDAVLAKARQAKAAGASRFCMGAAWRSPKDRDIPKVAAMIAGVKALGLETCATLGMLSGGQARALKDAGLDYYNHNLDTAPDYYDSIIHTRQYQDRLDTLEHVRDAGLKTCCGGIVGMGETRAQRVGLLLALATLPAHPDSVPINKLVQVAGTPLHGSAELDPFEFVRMIAVARIVM
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: AQVQVSTLLSVKTGGCPEDCAYCPQAQRYNTGVNAQKLMETDAVLAKARQAKAAGASRFCMGAAWRSPKDRDIPKVAAMIAGVKALGLETCATLGMLSGGQARALKDAGLDYYNHNLDTAPDYYDSIIHTRQYQDRLDTLEHVRDAGLKTCCGGIVGMGETRAQRVGLLLALATLPAHPDSVPINKLVQVAGTPLHGSAELDPFEFVRMIAVARIVMP
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: PINKLVQVAGTPLHGSAELDPFEFVRMIAVARIVMPRSMVRLSAGREAMSDELQALCFVAGANSIFYGDKLLTTGNPESERDLALFARLGLQ
type: DOMAIN
name: BATS_dom
description: Biotin and thiamin synthesis-associated domain

phrase: KTGGCPEDCAYCPQAQRYNTGVNAQKLMETDAVLAKARQAKAAGASRFCMGAAWRSPKDRDIPKVAAMIAGVKALGLETCATLGMLSGGQARALKDAGLDYYNHNLDTAPDYYDSIIHTRQYQDRLDTLEHVRDAGLKTCCGGIVGMGETRAQR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: PINKLVQVAGTPLHGSAELDPFEFVRMIAVARIVMPRSMVRLSAGREAMSDELQALCFVAGANSIFYGDKLLTTGNPESERDLALFARLGL
type: DOMAIN
name: BATS_dom
description: Biotin and thiamin synthesis-associated domain

phrase: AAIRHDWQHDELQALFDLPFPELLFRAAAVHREHFDPAQVQVSTLLSVKTGGCPEDCAYCPQAQRYNTGVNAQKLMETDAVLAKARQAKAAGASRFCMGAAWRSPKDRDIPKVAAMIAGVKALGLETCATLGMLSGGQARALKDAGLDYYNHNLDTAPDYYDSIIHTRQYQDRLDTLEHVRDAGLKTCCGGIVGMGETRAQRVGLLLALATLPAHPDSVPINKLVQVAGTPLHGSAELDPFEFVRMIAVARIVMPRSMVRLSAGREAMSDELQALCFVAGANSIFYGDKLLTTGNPESERDLALFARLGLQPMAVQV
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MVEIFNYSTSVYEKHSSTNKLVNDFRKEIQMEGAAIRDIAKHAQILDMTPKPSALSTLMQTNKKTCWASFSPPTNFHKQRFSTPYLVPSLGSPDKQDQDMEKISSYLKVLTRGKFSYRSTADTLSRKNKRSSDQKRNGQHFEQEELEVEEEVLVREGTVLLRALDQGIKSSNLLIDYVISRIFQFVQG

Annotated regions:
Protein sequence:
MSILSILKKDTNIDMQENNINDLVASASRVIAPLWPISTFAAHHPWMGLEKQSFEQVADWLKEIRNVDIYPSAAMIHSAKAKGEIEESFLQSGLSRWLDSQSFHIPRKKVEQFCQVALKLEELPSSLLSLPEVNKLAEEMSYINTESMKDSSLQPVSSLIENQKGENLSDILNYHIIKWCKLYLDDSGSSWTMPNREKGFYRAWQHLIKFDPALSKNERKVLKDWPQDAQVALARALSELGISESNIQAYLEGHLLSLPGWAGMIRWRSQQSIQEQELLIEYLAVRISMELAITKPYLPLKNQKVEKKVAIVPLIASWIYWGNISTREWLQMPAAEQSELLVFAYRFDENIRRKLWLEAWEQTHAEQLRKKIASKQRATNDKKRVLAQLAFCIDVRSEPFRRHLEKLGPFETFGIAGFFGLPIATSELGSNNNHPSLPVILKPKHQIKELTNENELKSYEQRKRVGSSVRYTFKTMKQNVLTSMALPELSGPLFGLQMVTRSFVPRGVGAFIRNLRKTMLQKPDTTFSLNHVHDTKGEIPIGFTKEEKVNYVRQALKMVGLTEKFAPLVVMCGHSSQSTNNPYAAALECGACGGAAGGFNARVFATLCNLPEVREALAAEGIKIPEDTIFAAAEHKTTVDELEWIYVPELSEAAQEAFDCIESIMPNVSQHANRERLTQLPNFKTKIKNASKEAHRFAEDWSEIRPEWGLARNASFIIGQRELTQDCDLEGRAFLHNYDWKQDESGDILANIIAGPGTVAQWINLQYY

Annotated regions:
Protein sequence:
MLKKVFETTNLKDSFQVEIGTYARNVDASILVRYQDTVVLTTTVFSRKPNNLDFLPLTVIYQEKLYAAGKIPGSFLRREGRSNDHEILTSRLIDRSLRPLFPDYFQQEVQVINTVLSLDPDFKSELASMLGSSLSLLISEIPFFEAISGVYVGKINDKFIINPTLQQLANSTLHLMVAGTKHNVTMIEAHANEVSEQDFLEAINFAHQYIKKLCLFQENIKQQFAPAKITNTLHQTEQTQQQAFFAKHQSQVKQAILSCNSKNDLQQLKEQILDQAKQTPFFKTIDTATVFDYEAHKKHLQTTETLFQKLSKQETRSLILQEKIRPDKRGLEEIRTLESQIDLLPRAHGSALFTRGQTQSLAAVTLGCLSESKIIDGLSDEQNKRFMLHYNFPPFSVGAVGRYTAPSRREIGHGTLAEKAISQVLPEEKDFPYTIRVVSEILESNGSSSQATVCASSLALMASGVPLKKAVAGMSVGLVFDQATNKYVILSDIQGLEDHVGDMDLKIAGTNKGITALQMDLKIQGIHFKILQEAFLQAKKGRLHILEHMSQTISQPRLEVSKYAPKVCMMQIKPEKIRDIIGSGGKIINQIIESHDGVKIDIEQDGRVFVMHSNLETVKKTVAFIESLIQEIQIGTCYQASILRFLSDKQGKMIGAVAQVCPGIEGLIHVNQKKFQKITDVLKIGETVSVKCTKINDRGRIDFLLLPKNTQEKNS

Annotated regions:
phrase: APKVCMMQIKPEKIRDIIGSGGKIINQIIESHDGVKIDIEQDGRVFVMHSNLETVKKTVAFIESLI
type: DOMAIN
name: KH_dom
description: K Homology domain

phrase: ISGVYVGKINDKFIINPTLQQLANSTLHLMVAGTKHNVTMIEAHANEVSEQDFLEAINFAH
type: DOMAIN
name: ExoRNase_PH_dom2
description: Exoribonuclease, phosphorolytic domain 2

phrase: MQIKPEKIRDIIGSGGKIINQIIESHDGVKIDIEQDGRVFVMHSNLETVKKTVAFI
type: DOMAIN
name: KH_dom_type_1
description: K Homology domain, type 1

phrase: EIRTLESQIDLLPRAHGSALFTRGQTQSLAAVTLGCLSESKIIDGLSDEQNKRFMLHYNFPPFSVGAVGRYTAPSRREIGHGTLAEKAISQVLPEEKDFPYTIRVVSEILESNGSSSQATVCASSLALMASGV
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1

phrase: FQVEIGTYARNVDASILVRYQDTVVLTTTVFSRKPNNLDFLPLTVIYQEKLYAAGKIPGSFLRREGRSNDHEILTSRLIDRSLRPLFPDYFQQEVQVINTVLSLDPDFKSELASMLGSSLSLLISEI
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1

phrase: QIGTCYQASILRFLSDKQGKMIGAVAQVCPGIEGLIHVNQKKFQKITDVLKIGETVSVKCTKINDRGRIDFLL
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: GTCYQASILRFLSDKQGKMIGAVAQVCPGIEGLIHVNQKKFQKITDVLKIGETVSVKCTKINDRGRIDFLL
type: DOMAIN
name: S1_domain
description: S1 domain
Protein sequence:
MLPFTLQQLRILKAVATEKNFTKAAELLYLSQPSLSKQIKTLEKNLDILLVNRENNKISLTENGKIFLQYSERILALCEESCRALIDLKNGERGSLTVGASQTIGTYLMPRVLALFAQNYPQIDLKVQVNSTRIVAKNILNREIDIAVVGGEIPLDLKKNLTVEKFVEDEFSLIIPKSHPFANKKIVTKEDLYHLNFISLNSNSTIRKFIDNILIQNQIDTKQLKIIMQLNSIEAIKTAVSLGQGAAFVSSAAIEKEIELKTIEILKIENIRITRTLSIISNSESYKSKAFEFFSNELKKLKNEIEN

Annotated regions:
phrase: FTKAAELLYLS
type: DOMAIN
name: Tscrpt_reg_HTH_LysR
description: Transcription regulator HTH, LysR

phrase: QPSLSKQIKT
type: DOMAIN
name: Tscrpt_reg_HTH_LysR
description: Transcription regulator HTH, LysR

phrase: LEKNLDILLVN
type: DOMAIN
name: Tscrpt_reg_HTH_LysR
description: Transcription regulator HTH, LysR

phrase: LQQLRILKAVATEKNFTKAAELLYLSQPSLSKQIKTLEKNLDILLVNRENNKISLTENG
type: DOMAIN
name: Tscrpt_reg_HTH_LysR
description: Transcription regulator HTH, LysR

phrase: NGERGSLTVGASQTIGTYLMPRVLALFAQNYPQIDLKVQVNSTRIVAKNILNREIDIAVVGGEIPLDLKKNLTVEKFVEDEFSLIIPKSHPFANKKIVTKEDLYHLNFISLNSNSTIRKFIDNILIQNQIDTKQLKIIMQLNSIEAIKTAVSLGQGAAFVSSAAIEKEIELKTIEILKIENIRITRTLSIISNSESYKSKAFEFFSNEL
type: DOMAIN
name: LysR_subst-bd
description: LysR, substrate-binding

phrase: FTLQQLRILKAVATEKNFTKAAELLYLSQPSLSKQIKTLEKNLDILLVNRENNKISL
type: DOMAIN
name: Tscrpt_reg_HTH_LysR
description: Transcription regulator HTH, LysR
Protein sequence:
MFKSGISAFARTARPSFAAASRRAVRPAALNLRAPALSRFASSAGVGDGKIYQVIGAVVDVKFDTDKLPPILNALETQNNGQKLVLEVSQHLGENVVRCIAMDGTEGLVRGAKASDTGAPITIPVGPATLGRIINVTGDPIDERGPIKTDKFRPIHAEAPEFVEQSTTAEILVTGIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTGVGERTREGNDLYHEMQETSVIQLDGDSKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGQMQERITTTTKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSKSRMLDPRIVGQEHYETATRVQQILQEYKSLQDIIAILGMDELSEADKLTVERARKIQRFLSQPFTVAQVFTGIEGKLVDLKDTIASFKAILAGEGDDLPEGAFYMVGDFASARAKGEKILAELEGQA

Annotated regions:
phrase: PRIVGQEHYETATRVQQILQEYKSLQDIIAILGMDELSEADKLTVERARKIQRFLSQPFTVAQVFTGIEGKLVDLKDTIASFK
type: DOMAIN
name: ATP-synt_VA_C
description: ATP synthase A/B type, C-terminal domain

phrase: RGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTGVGERTREGNDLYHEMQETSVIQLDGDSKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGQMQERITTTTKGSITSVQAVYVPADDLTDPAPATTFAHLDA
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: IYQVIGAVVDVKFDTDKLPPILNALETQNNGQKLVLEVSQHLGENVVRCIAMDGTEGLVRGAKASDT
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_N
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain

phrase: GIKVVDLLAPYARGGKIGLFGGAGVGKTVFIQELINNIAKAHGGYSVFTGVGERTREGNDLYHEMQETSVIQLDGDSKVALVFGQMNEPPGARARVALTGLTIAEYFRDEEGQDVLLFIDNIFRFTQAGSEVSALLGRIPSAVGYQPTLAVDMGQMQERITTTTKGSITSVQAVYVPADDLTDPAPATTFAHLDATTVLSRGISELGIYPAVDPLDSK
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_nucl-bd
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain

phrase: PAVDPLDSK
type: ACTIVE_SITE
name: ATPase_a/bsu_AS
description: ATPase, alpha/beta subunit, nucleotide-binding domain, active site
Protein sequence:
MQDNVSQRKWNVESSKSANNAFNPIRRIVDKGGFKPNPNKSTISLSIGDPCVFGNLNILDYANDLLIENIKSSKFNGYPPSTGYEIAREAVAKYVETPTSKLTSKDIIVASGASGAIELAIGVLLNEGDNILVPKPGFPLYECTSKTKFINVKHYNLLEKQGFNVDLEHLRSLIDDKTKAILVNNPSNPCGIVYSKQHLLDIIQVAREYCLPIIADEIYSDLTFGEHKFYPMASLTDKVPILSIGGIAKRFLVPGWRLGWVAIHDRDNIFSNGRIIEGLISLSQVILGPNSLVQSILPKLLDPQNTQVKEWCSTITKTLESHSKLTVDMLSKANGLKPVCSSGTMYQMIEIDCSKYEDIADDNEFVGKLLEEQSVFLLQGTVFSLPNFFRIVFCAPIDKLTEAYERIIEFCETHKKK

Annotated regions:
phrase: GIAKRFLVPGWRL
type: BINDING_SITE
name: NHTrfase_class1_PyrdxlP-BS
description: Aminotransferases, class-I, pyridoxal-phosphate-binding site

phrase: TISLSIGDPCVFGNLNILDYANDLLIENIKSSKFNGYPPSTGYEIAREAVAKYVETPTSKLTSKDIIVASGASGAIELAIGVLLNEGDNILVPKPGFPLYECTSKTKFINVKHYNLLEKQGFNVDLEHLRSLIDDKTKAILVNNPSNPCGIVYSKQHLLDIIQVAREYCLPIIADEIYSDLTFGEHKFYPMASLTDKVPILSIGGIAKRFLVPGWRLGWVAIHDRDNIFSNGRIIEGLISLSQVILGPNSLVQSILPKLLDPQNTQVKEWCSTITKTLESHSKLTVDMLSKANGLKPVCSSGTMYQMIEIDCSKYEDIADDNEFVGKLLEEQSVFLLQGTVFSLPNFFRIVFCAPIDKLTEAYER
type: DOMAIN
name: Aminotransferase_I/II_large
description: Aminotransferase, class I/classII, large domain
Protein sequence:
MMALVRDRRAHYVMSIVIRWVHCFSSSLRGTFGTRWEAMKAKATELRVCCARRKREAREFKPPQMRGSTRLNISDDLKIGFFSTDHATQTDSSEILSVKELSSSTQKLAQMMKSLQVDFGFLKQLLQLKFEDRLKEESLSLFTILHDRILEIEKHYQQNEDKMRKSFNQQLADAIAVIKGMYQQFFEVEEENVSLQDASTVKTNILLRKLKEKEEVIKELKEELDQYKDFGFHKMESFAKETSSPKSNLEKENLEYKVENERLLQIISELEEEIQINLKENSGLEDELISMKEMAEKDHKTIQKLMDSRDRLREELHYEKSLVQDVINKQKEDKEMRKKYGSLSVKVARSAKGREASLSPWPKSPPSTTALRPHSATMSVSSAGAQKAKMPKKALKEDQAVVEDKHGLESQIEALKANLENEKKKVERFRKEADRLNKSWEKRFFILRNSFHVLKNEMFTRHTLFRQFAVLADTSFNYIKVKPLLVQSRTTMTAISSSSHCTSSIDGKHVDVVSDQAALQLSPKGKLSESPKEESLEEPSMRQSSPAETVD

Annotated regions:
phrase: MFTRHTLFRQFAVLADTSFNYIKVKPLLVQSRTTMTAISSSSHCTSSIDGKHVDVVSDQAALQLSPKGKLSESPKEESLEEPSMRQSS
type: DOMAIN
name: DUF4724
description: Domain of unknown function DUF4724

phrase: RLNISDDLKIGFFSTDHATQTDSSEILSVKELSSSTQKLAQMMKSLQVDFGFLKQLLQLKFEDRLKEESLSLFTILHDRILEIEKHYQQNEDKMRKSFNQQLADAIAVI
type: DOMAIN
name: DUF4709
description: Domain of unknown function DUF4709
Protein sequence:
MKTLWQHCHVATMAQGVYSIIEDAAIVTSGALIEWIGPRSQLPSGEYPAVNDLQGAWVTPGLIDCHTHTVFGGNRSGEFEKRLQGVSYAEIAAAGGGIASTVRATREASEDELFASAAKRLKSLMRDGVTTVEMKSGYGLDLASERKILRVIRRLAAELPISVRSTCLAAHALPPEYQDRADDYIDHICAEMLPALAAEGLVDAVDAFCEYLAFSPEQVERVFIAAQKLGLPVKLHAEQLSSLHGSSLAARYHALSADHLEFMDEADAIAMAESDTVAVLLPGAFYFLRETRLPPMEALRKHKVKIAIASDLNPGTSPALSLRLMLNMACTCFRMTPEEALAGATIHAAQALGMAETHGSLEVGKVADFVAWQIDRPADLAYWLGGELDKRVVRHGVESSL

Annotated regions:
phrase: WVTPGLIDCHTHTVFGGNRSGEFEKRLQGVSYAEIAAAGGGIASTVRATREASEDELFASAAKRLKSLMRDGVTTVEMKSGYGLDLASERKILRVIRRLAAELPISVRSTCLAAHALPPEYQDRADDYIDHICAEMLPALAAEGLVDAVDAFCEYLAFSPEQVERVFIAAQKLGLPVKLHAEQLSSLHGSSLAARYHALSADHLEFMDEADAIAMAESDTVAVLLPGAFYFLRETRLPPMEALRKHKVKIAIASDLNPGTSPALSLRLMLNMACTCFRMTPEEALAGATIHAAQALGMAETHGSLEVGKVADFVAWQ
type: DOMAIN
name: Amidohydro-rel
description: Amidohydrolase-related
Protein sequence:
MTQQAPLIDGYEVVIGIEIHCQLNTDSKIFSNAPTVFGQEPNTQATIVDLGFPGVLPVLNAGVIERALKFGMGVNAKLGTYNTFDRKNYFYPDLPKGYQITQMANPIVGEGYIDILVNAGQKDEYTKRIGITRAHLEEDAGKSVHDAVPQMTGVDLNRAGTPLIEIVSEPDMRSVDEAVAYVKTIHELVTWLGISDAIMAEGSFRADINVSVHKPNTPFGTRCELKNLNSFRFIHRAIKSEIERQIDVIEDGGKVVQATRLYDPERDETRAMRTKEEANDYRYFPDPDLLPVIISDETLAKVRADMPELPSVRKERFVNEFGLTAYDANVLNGSRELSDYFLQVLDIIGKNNAKIAANWVMGELSGSLNKNELTIDQSPISAKRLAGLIVRILDDTISGKIAKEVFGHLWESDKSADEIITEKGLKQETDTGAIEAIIVDVLANNQAMVDEYKGGKEKAFNGLVGQVMKASRGKANPAQVNALLKQMIGA

Annotated regions:
phrase: QVLDIIGKNNAKIAANWVMGELSGSLNKNELTIDQSPISAKRLAGLIVRILDDTISGKIAKEVFGHLWESDKSADEIITEKGLKQETDTGAIEAIIVDVLANNQAMVDEYKGGKEKAFNGLVGQVMKASRGKANPAQVNALLKQM
type: DOMAIN
name: Asn/Gln_amidotransferase
description: Asn/Gln amidotransferase

phrase: DYFLQVLDIIGKNNAKIAANWVMGELSGSLNKNELTIDQSPISAKRLAGLIVRILDDTISGKIAKEVFGHLWESDKSADEIITEKGLKQETDTGAIEAIIVDVLANNQAMVDEYKGGKEKAFNGLVGQVMKASRGKANPAQVNALLKQM
type: DOMAIN
name: Asn/Gln_amidotransferase
description: Asn/Gln amidotransferase

phrase: VVIGIEIHCQLNTDSKIFSNAPTVFGQEPNTQATIVDLGFPGVLPVLNAGVIERALKFGMGVNAKLGTYNTFDRKNYFYPDLPKGYQITQMANPIVGEGYIDILVNAGQKDEYTKRIGITRAHLEEDAGKSVHDAVPQMTGVDLNRAGTPLIEIVSEPDMRSVDEAVAYVKTIHELVTWLGISDAIMAEGSFRADINVSVHKPNTPFGTRCELKNLNSFRFIHRAIKSEIERQIDVIEDGGKVVQATRLYDPERDETRAMRTKEEANDYRYFPDPDLLPVIISDET
type: DOMAIN
name: Asn/Gln-tRNA_Trfase_suB/E_cat
description: Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic

phrase: LNRAGTPLIEIVSE
type: CONSERVED_SITE
name: Gln-tRNA_amidoTrfase_suB_CS
description: Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site
Protein sequence:
MDTSKDTLICRLCGVNLVKGKHKSIFEGSTDLIHKIKETLPISISIDDNGSKYVCLSCYDKITFYYKFIQEVLEYSKRLENVSQIESFFDRSKEVTDFSQIHSDAIYTCPNCNVDLMILLVSNSQGCDYTFQISLAMVNHSENKHIKKKNIQIHKNVVHLNNTKNNIHLKHGNKTTITEDIENMPNQEVSLTLPVLISTNYYKEENLNCIDALSSKQNTKIEVEQDTKEDLKESNSVHLSKISKVQEISHVSNNLMDYVYNSADPLVKNEPESDNTYWLDSETDYKSEKDTCITSQDTMLEQNDIQDENDIYKSCLKYVCKLCGARYLSHLKYEFHMERHKLGKTDRYECTLCDKETSNENLLWDHYFHTHKSLQRYICVECGKLFTKRTRLNGHQKNYKHSGVKQIQVGTSEDDISEDVIQKAIATTKQEKVSINCNLCGKLISDLDPDAINDLVTCATCEDSTLSLMIDGNETKVISPRDIFVIYPTVEGESIVKMAGEKRTQDQEETLLSETVILIDIEGTTTSISFVKDTLFPYVRENLKKYIETKWEDEEFKQDFEKLKEQAKKDEEDKIDGFVPITGTNAEEERKSLAKNILWQMDGDRKTGALKQLQGHMWHEAYNSGTIKAHVYEDVPKALESWTSDGKKVYIYSSGSVEAQKLLFGHSIHGDLLKYFSGYFDTEVGAKQESSSYKNILNKIGAEPSSVIFLTDVVKEAAAAKEAGLSTVIVLREGNAPLTDEERVAFTTIKSFLDLTFQTSTKRQKLET

Annotated regions:
phrase: CKLCGARYLSHLKYEFHMER
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: CVECGKLFTKRTRLNGHQKNYK
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: YICVECGKLFTKRTRLNGHQKNYKHSGVK
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: YECTLCDKETSNENLLWDHYFHTHKSLQ
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: LICRLCGVNLVKGKHKSIFEGSTDLIHKIKETLPISISIDDNGSKYVCLSCYDKITFYYKFIQEVLEYSKRLEN
type: DOMAIN
name: Znf_AD
description: Zinc finger, AD-type

phrase: ICRLCGVNLVKGKHKSIFEGSTDLIHKIKETLPISISIDDNGSKYVCLSCYDKITFYYKFIQEVLEYSKR
type: DOMAIN
name: Znf_AD
description: Zinc finger, AD-type

phrase: YICVECGKLFTKRTRLNGHQKNYK
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: YTCPNCNVDLMILLVSNSQGCDYTFQISLAMVNHSENK
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: YVCKLCGARYLSHLKYEFHMER
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: YECTLCDKETSNENLLWDHYFHT
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: ICRLCGVNLVKGKHKSIFEGSTDLIHKIKETLPISISIDDNGSKYVCLSCYDKITFYYKFIQEVLEYSKRLEN
type: DOMAIN
name: Znf_AD
description: Zinc finger, AD-type
Protein sequence:
MDNTAITSQSSSTPLVCSVTPIIVGSPPSPANVIELSSPSTPPTPLTLLASLSETPSRKTTNPDTNGENTICHGVRQVRRVPRNNPVTGPSKEHKQRTRSPKTTTRREIKIVEGDRLIVGHDKREKKGETTKRMKKRDGVADKKLYARVSKVKSSENLDLDAKIPSSKVCNNTLPLVGDDMDNGSSELKLEQAIKRRHDWTPTREVTTPVVDVAELHSSPCGKAVTRMHGVGTLLSDYGFSGVVETSLGTKSESFRNAPTTKRPMELQKFSTVPAIPTPTESSTTEDVQGSSSKQQRVKAKKPQKGKLTTITSHATAKYCVADQTVDLDYIQNVAPKSPRRKNISNRPSGTKHSNSGRGKSSTLKNDNGRPVFRVVPPLEAFKSFEGQELLFGTSSQLERGYPEYPCDETQDTQNSPSNSAAVSELAVPYRISSEGKDLGSSLFGLSGSKNLWSASARDLTGAVFEGDEIDFQGASMGLSVLATKSRCHPGNRGPPRRNLVDVDNVPDKKLDIDTTEGENGNHSSVADNIVDRENLNPKISANTSETNLECAPQNKPAFSRFTTSELAKKVAAYGFKPIKSRDNMISLLEKCWETQSKTLILESKPNQGTDDARKNGFRKENHSDVRVRPDSATLANRRSPKKQQAKALSKFQEPNNFLPIENSTTTASMLPIISSHTILINDDQLSDSVGETVSFLPSLDHNGNGTTIQENMLEIKSPATPNARRSRQGSSSASFSIEPPSLASQITKAIKSQPRTRAFNGLKQPTWYEKILMYDPIQLEDLAAWLNTDGFGRIGEDREVGPGVVREWCESKGVCCVWKKQVSGRSHYLPMVS

Annotated regions:
Protein sequence:
MATIKDVARLAGVSTTTVSHVINKTRFVAETTQEKVMEAVKQLNYAPSAVARSLKCNTTRTIGMLVTQSTNLFFSEVIDGVESYCYRQGYTLILCNTGGIYEKQRDYIRMLAEKRVDGILVMCSDLTQELQDMLDAHKDIPKVVMDWGPETSHADKIIDNSEEGGYLATKYLTDRGHTEIACLSGHFVKAACQERIQGFRRAMAEAKLTVNEDWILEGNFECDTAVLAADKIIAMDKRPTAVFCFNDTMALGLMSRLQQKGIRIPEDMSVIGYDNIELAEYFSPPLTTVHQPKRRVGKNAFEILLERIKDKEHERRIFEMHPEIVERDTVKDLTKS

Annotated regions:
phrase: ATIKDVARLAGVSTTTVSHVINKTRFVAETTQEKVMEAVKQLNYAPSAVARSLK
type: DOMAIN
name: HTH_LacI
description: LacI-type HTH domain

phrase: KDVARLAGVSTTTVSHVINKTRFVAETTQEKVMEAVKQLNYAPSAVARSL
type: DOMAIN
name: HTH_LacI
description: LacI-type HTH domain

phrase: MATIKDVARLAGVSTTTVSHVINKTRFVAETTQEKVMEAVKQLNYAPSAVARSLKCNTTRTIGMLVTQST
type: DOMAIN
name: HTH_LacI
description: LacI-type HTH domain

phrase: TIKDVARLAG
type: DOMAIN
name: HTH_LacI
description: LacI-type HTH domain

phrase: VSTTTVSHVI
type: DOMAIN
name: HTH_LacI
description: LacI-type HTH domain

phrase: TIKDVARLAGVSTTTVSHVINKTRFVAETTQEKVMEAVKQLNYAP
type: DOMAIN
name: HTH_LacI
description: LacI-type HTH domain

phrase: KYLTDRGHTEIACLSGHFVKAACQERIQGFRRAMAEAKLTVNEDWILEGNFECDTAVLAADKIIAMDKRPTAVFCFNDTMALGLMSRLQQKGIRIPEDMSVIGYDNIELAEYFSPPLTTVHQPKRRVGKNAFEILLERIKDKEHERRIFEMHPEIVERDT
type: DOMAIN
name: LacI/GalR-like_sensor
description: Transcriptional regulator LacI/GalR-like, sensor domain
Protein sequence:
MKTSLFKSLYFQVLTAIAIGILLGHFYPEIGEQMKPLGDGFVKLIKMIIAPVIFCTVVTGIAGMESMKAVGRTGAVALLYFEIVSTIALIIGLIIVNVVQPGAGMNVDPTTLDAKAVAVYADQAKDQGIVAFIMDVIPASVIGAFASGNILQVLLFAVLFGFALHRLGSKGQLIFNVIESFSQVIFGIINMIMRLAPIGAFGAMAFTIGKYGVGTLVQLGQLIICFYITCILFVVLVLGSIAKATGFSIFKFIRYIREELLIVLGTSSSESALPRMLDKMEKLGCRKSVVGLVIPTGYSFNLDGTSIYLTMAAVFIAQATNSQMDIVHQITLLIVLLLSSKGAAGVTGSGFIVLAATLSAVGHLPVAGLALILGIDRFMSEARALTNLVGNGVATIVVAKWVKELDHKKLDDVLNNRAPDGKTHELSS

Annotated regions:
phrase: PTGYSFNLDGTSIYLTMAAVFIA
type: CONSERVED_SITE
name: Na-dicarboxylate_symporter_CS
description: Sodium:dicarboxylate symporter, conserved site

phrase: PLGDGFVKLIKMIIA
type: CONSERVED_SITE
name: Na-dicarboxylate_symporter_CS
description: Sodium:dicarboxylate symporter, conserved site