nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTVMETRRNCQHWWKGGILLLGMLMIYSAAQQEQLWVTVYYGVPVWKEATTTLFCASDARAYDTEAHNVWATHACVPTDPNPQEVVLGNVTENFNMWKNNMVEQMNDDIISLWDESLKPCVKLTPLCVTLNCTDLNINITRSNGTEDNITRMDPGEIKNCSFYVKPVIKDKVLKAHASFYKYDVVQIGNNNSSYRLISCNASVITQACPKTSFEPIPIHYCAPAGFAILKCNDNNFNGTGPCKNVSTVQCTHGIRPVVSTQLLLNGSLAAEKVVLRSANFSDNTKTIIVQLNKTIKFDCTRPGNNTRRSITIGPGRTFFTGEIIGDIRKAHCNISRTQWNNTLEKVVAELRGIEQFKNKTIKFSHSTGGDPEVTMINFNCGGEFFYCNSTQLFSSTWMANGTSNGTVGNDTIILPCKIKQFVNMWQRIGQAVYAPPIRGYINCSSNITGLLLTIDGDRNDTQSETFRPGGGDMRDNWRSELYKYKVVKIEPLGIAPTKAKRRVVQREKRAVTLGAMFLGFLGAAGSTMGAASMTLTVQARLLLSGIVQQQSNLLRAIQAQQHLLQLTVWGIKQLQARVLALERYLRDQQLLGIWGCSGKLICTTAVPWNTSWSNKSYTTIWENMTWMEWEREIDNYTSLIYSLIEDSQNQQEKNEQELLELDKWASLWNWFSITHWLWYIKLFIMIVGGLIGLRIVFAVFSIVNRVRQGYSPLSFQTRFPAPRGPDRPEGIEKEGGERDRDRSRPLADGFLVLIWDDLRSLCLFSYRR

Annotated regions:
phrase: VQARLLLSGIVQQQSNLLRAIQAQQHLLQLTVWGIKQLQARVLALERYLRDQQLLGIWGCSGKLICTTAVPWNTSWSNKSYTTIWENMTWMEWEREIDNYTSLIYSLIEDSQNQQEKNEQELLELD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKEATTTLFCASDARAYDTEAHNVWATHACVPTDPNPQEVVLGNVTENFNMWKNNMVEQMNDDIISLWDESLKPCVKLTPLCVTLNCTDLNINITRSNGTEDNITRMDPGEIKNCSFYVKPVIKDKVLKAHASFYKYDVVQIGNNNSSYRLISCNASVITQACPKTSFEPIPIHYCAPAGFAILKCNDNNFNGTGPCKNVSTVQCTHGIRPVVSTQLLLNGSLAAEKVVLRSANFSDNTKTIIVQLNKTIKFDCTRPGNNTRRSITIGPGRTFFTGEIIGDIRKAHCNISRTQWNNTLEKVVAELRGIEQFKNKTIKFSHSTGGDPEVTMINFNCGGEFFYCNSTQLFSSTWMANGTSNGTVGNDTIILPCKIKQFVNMWQRIGQAVYAPPIRGYINCSSNITGLLLTIDGDRNDTQSETFRPGGGDMRDNWRSELYKYKVVKIEPLGIAPTKAKRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: MGAASMTLTVQARLLLSGIVQQQSNLLRAIQAQQHLLQLTVWGIKQLQARVLALERYLRDQQLLGIWGCSGKLICTTAVPWNTSWSNKSYTTIWENMTWMEWEREIDNYTSLIYSLIEDSQNQQEKNEQELLELDKWASLWNWFSITHWLWYIKLFIMIVGGLIGLRIVFAVFSIVNRVRQGYSPLSFQ
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MPSKSACLRHTEAPGQLEGRMLQGQLSNPEKKLIPTSASLPAADSQSSQTNSMPPLSMPAKPSNQNLQAKANLITPQPPIRPKLERTLSLDDKGWRRRRFRGSQEDLTVQNGASPCRGSLQDSVAQSPAYSRPLPCLSTSLQEIPKPRRATGSEGGSPSLWSDCLSGMISTSLDLLHREAASGGPHSRLASLRATHTPPAMDLNIASSSLRTANKVDPEHTDYKLRMQNRLVRAHSNLGPSRPRSPLAGDDHSIHSARSSFSLLAPIRTKDIRSRSYLEGSLLASGALLGADELARYFPDRNMALFVATWNMQGQKELPASLDEFLLPTEADYTQDLYVIGVQEGCSDRREWETRLQETLGPQYVLLSSAAHGVLYMSLFIRRDLIWFCSEVEYSTVTTRIVSQIKTKGALGVSFTFFGTSFLFITSHFTSGDGKVAERLLDYNRTIQALALPRNVPDTNPYRSSAGDVTTRFDEVFWFGDFNFRLSGGRVAVEAFLKQDPEVDVLALLQHDQLTREMKKGSIFKGFEEAEIHFLPSYKFDIGKDTYDSTSKQRTPSYTDRVLYKSRHKGDICPMKYSSCPGIKTSDHRPVYGLFRVKVRPGRDNIPLAAGKFDRELYLIGIKRRISKEIQRQEALKSQSSSAVCTVS

Annotated regions:
phrase: RNMALFVATWNMQGQKELPASLDEFLLPTEADYTQDLYVIGVQEGCSDRREWETRLQETLGPQYVLLSSAAHGVLYMSLFIRRDLIWFCSEVEYSTVTTRIVSQIKTKGALGVSFTFFGTSFLFITSHFTSGDGKVAERLLDYNRTIQALALPRNVPDTNPYRSSAGDVTTRFDEVFWFGDFNFRLSGGRVAVEAFLKQDPEVDVLALLQHDQLTREMKKGSIFKGFEEAEIHFLPSYKFDIGKDTYDSTSKQRTPSYTDRVLYKSRHKGDICPMKYSSCPGIKTSDHRPVYGLFRVKVRPG
type: DOMAIN
name: IPPc
description: Inositol polyphosphate-related phosphatase

phrase: TWNMQGQKELPASLDEFLLPTEADYTQDLYVIGVQEGCSDRREWETRLQETLGPQYVLLSSAAHGVLYMSLFIRRDLIWFCSEVEYSTVTTRIVSQIKTKGALGVSFTFFGTSFLFITSHFTSGDGKVAERLLDYNRTIQALALPRNVPDTNPYRSSAGDVTTRFDEVFWFGDFNFRLSGGRVAVEAFLKQDPEVDVLALLQHDQLTREMKKGSIFKGFEEAEIHFLPSYKFDIGKDTYDSTSKQRTPSYTDRVLYKSRHKGDICPMKYSSCPGIKTSDHRPV
type: DOMAIN
name: IPPc
description: Inositol polyphosphate-related phosphatase
Protein sequence:
MNKTVIKNKLKQESFVPSKKMGQNFLLSNEIKNKIVNVANISKDDLILEIGPGWGAITELLVQKTDTLVAIELDKRLYAHLKTYIKAPNFHIINNDVLCVDLDKLILDYTNTKKNQKIKVVANLPYAISSKIVLKIIQSKLINDAYIMVQKEMAERIGAKVNTRGYNAFTVLVQLFCKTKILFQVNAKEFHPQPKVQSAVIHLENLHNKVDFDIEQVSKFLRICFLNKRKKLKNNLSNIYDIKLVNEMFIDYNLDMNLRAENIEPKMFLELFNYLNKSNNE

Annotated regions:
phrase: ILEIGPGWGAITELLVQKTDTLVAIEL
type: CONSERVED_SITE
name: rRNA_Ade_Mease_Trfase_CS
description: Ribosomal RNA adenine methylase transferase, conserved site

phrase: IKNKIVNVANISKDDLILEIGPGWGAITELLVQKTDTLVAIELDKRLYAHLKTYIKAPNFHIINNDVLCVDLDKLILDYTNTKKNQKIKVVANLPYAISSKIVLKIIQSKLINDAYIMVQKEMAERIGAKVNTRGYNAFTVLVQLFCKTKILFQVNAKEFHPQPKVQSAVIHLENL
type: DOMAIN
name: rRNA_Ade_methylase_Trfase_N
description: Ribosomal RNA adenine methylase transferase, N-terminal
Protein sequence:
MSYFTQEQKTQWKDNGFVHLKGFLNEALAQDIKDWTQELYEWEEAPGKWMKYFETSSDTGERLLCRVENFIDYHKGIKGFLCGEMIYGMVSELMGEQAVLFKEKINFKYPGGAGFAYHQDAPAFTSFGQKYHITMMVSVDASNEENGCLRMAHGFSEEKTLEQEPDGTVCKKLAAKLDWRPLETGPGDLVLFNSYVPHYSEANTSDRSRRAMFITYNRLSEGEKRLDYFKDKREKFPPEAERIEGKDYSSAESLYNLGNPIK

Annotated regions:
Protein sequence:
MASILDQYVDSLSHSASSPQSRASLGIPHSGYVNARLEKETPIFNKQRIDFTPPEKINSLVVSSNQLCMSLGKDILFRLDLAKADEPNQVELGRKDEAKVHKLFLDHTGSHLIIALNTSECLYLSRSAQKVRILSRWKGHLIESVGWNKFFGTEMNTGPILVGTSQGHIYEAEISVSEGSLFGTNPDQYFRLIYNLEEEAGPAPVCCLEIERGIDGKCFIIATTRKRLFQFVGKIPEGSEQQAFGAIFSMPADHLPGFREFPASLGYSEIAFYTPKLRSSPSAFAWMMGNGVLYGSLDYGRLDSILSDEQVWEYPSDVDAVANKPISIVLTQFHFLLLFPDHVKAVCTLNGQVVFQDMFLEKFGSLKRMIKDPSFGQIWIHTEKVVFRYNVQRESRDVWKMYMNVNKFDLAKEYCKDRPECLDTVLAKEAEYCFQNRRYLDSAKCYALTQNYFEEIALKFIEAQQEEALMEFLIKKLANLKQSEKTQTTLLTTWLTELYLNRLGILEGDASKRDLYEKTRDKFRSFLGSPKNKECLFNNRATIHELLASHGDTEHMVYFAVIMQDYERVIAHYCQHENYNEALEVLSKIKDENLFYKFSPVLIHHIPKKVVDAWIEMGKKLDAKNLIPALVNYSQSGSTQQVNEAIRYMEFCVSELKETQQAIHNYLLSLYALCRPDSLLSYLEQAGTYADNIHYDLKYALRLCAEHGHHRACVHVYKVMEMYEEAVDLALQVDVDMAKSCADLPDEDEELRKKLWLKIARHVVQEEK

Annotated regions:
phrase: IPALVNYSQSGSTQQVNEAIRYMEFCVSELKETQQAIHNYLLSLYALCRPDSLLSYLEQAGTYADNIHYDLKYALRLCAEHGHHRACVHVYKVMEMYEEAVDLA
type: REPEAT
name: CHCR
description: Clathrin heavy-chain repeat

phrase: PIFNKQRIDFTPPEKINSLVVSSNQLCMSLGKDILFRLDLAKADEPNQVELGRKDEAKVHKLFLDHTGSHLIIALNTSECLYLSRSAQKVRILSRWKGHLIESVGWNKFFGTEMNTGPILVGTSQGHIYEAEISVSEGSLFGTNPDQYFRLIYNLEEEAGPAPVCCLEIERGIDGKCFIIATTRKRLFQFVGKIPEGSEQQAFGAIFSMPADHLPGFREFPASLGYSEIAFYTPKLRSSPSAFAWMMGNGVLYGSLDYGRLDSILSDEQVWEYPSDVDAVANKPISIVLTQFHFLLLFPDHVKAVCTLNGQVVFQDMFLEKFGSLKRMIKDPSFGQIWIHTEKVVFRYN
type: DOMAIN
name: Pep3_Vps18
description: Pep3/Vps18/deep orange, beta-propeller domain

phrase: GKKLDAKNLIPALVNYSQSGSTQQVNEAIRYMEFCVSELKETQQAIHNYLLSLYALCRPDSLLSYLEQAGTYADNIHYDLKYALRLCAEHGHHRACVHVYKVMEMYEEAVDLALQVDVDMAKSCADLPDEDEELRKKLWLKIARHVVQEE
type: REPEAT
name: Clathrin_H-chain/VPS_repeat
description: Clathrin, heavy chain/VPS, 7-fold repeat
Protein sequence:
MIQPQTHLNVADNSGARELMCIRIIGASNRRYAHIGDVIVAVIKEAVPNMPLERSEVVRAVIVRTCKELKRDNGMIIRYDDNAAVVIDQEGNPKGTRIFGAIARELRQLNFTKIVSLAPEVL

Annotated regions:
phrase: AVIVRTCKELKRDNGMIIRYDDNAAV
type: CONSERVED_SITE
name: Ribosomal_uL14_CS
description: Large ribosomal subunit protein uL14, conserved site
Protein sequence:
MARVKRGVTAHAKHKKVYKLAKGYRGRRKNTIRTAKAAVDKAGQYAFRDRKRKKRTFRALWIQRLNAAVRPFGMTYSVFINGLSKSGIVVDRKVLSDLAINEPAAFQAIAEKAKAALAA

Annotated regions:
phrase: KRTFRALWIQRLNAAV
type: CONSERVED_SITE
name: RIBOSOMAL_L20_CS
description: Large ribosomal subunit protein bL20, conserved site
Protein sequence:
MEPILHIQGDAHSSLTPLIFIHAVSGLAWPYMALGNLSNTSDPARSRPVYGISSPVYSSELQPHGPYLLGGWSMGGMIAVKMAEILQAKKETVQQVILLDSINPEKYPAFVNEEEHRIIADGLFTNVCQAMGMADLADDSDDEDNRSDASDASDDGSTMSDEEEEDDNLHRLFSTMRRHIHASTLSISSTEPGKLLPPNSVCHTSVTLVKCTQLSETVPALFSARQRCIRRCALHPTLQWRPQNFDRFRTLLIDARHDSLFDEEHVEEVTSMLRQILESC

Annotated regions:
phrase: ELQPHGPYLLGGWSMGGMIAVKMAEILQAKKETVQQVILLDSINPE
type: DOMAIN
name: Thioesterase
description: Thioesterase
Protein sequence:
MASLSHILVLCVGLLAMVNAEAPQEHDPFTYDYQSLRIGGLIIAGILFILGILIVLSRRCRCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR

Annotated regions:
phrase: DPFTYDYQSLRIG
type: CONSERVED_SITE
name: FXYD_motif
description: Ion-transport regulator, FXYD motif
Protein sequence:
MAPLVGVVALQGGFAEHIEVLESLGANTRRVRRSADLQGLDGIVLPGGESTVIDKLMRSFSLAEPLKDAVRRGLPVLATCAGLVVLATDLEDAAKGQHTLSLLDVTVRRNAFGSQLDSFEGTLDIDGVGDGVSATFIRAPVITRVGPGVEVIAQLPDEAGNVSGAIVGVRQRNVLALSFHPEETDDDRVHRTWLRQVSEEV

Annotated regions:
phrase: GIVLPGGEST
type: CONSERVED_SITE
name: PdxT/SNO_CS
description: PdxT/SNO family, conserved site
Protein sequence:
MWAWALLPICLTIWATAGIWIVYGMSVSNGSVNLSDGFPYISLCGTDPPQSCVFGQVLNVGAMLGVWISAIRFQQIRDYNCHSVLNSVSLAMGILCALGTSIVGNFQQSNQLETHLAGAFLAFVIGNIYFWMQTALTYMVKPTHGGCYIGPIRFCLSVACTALIVLMAVFLKMNMKSISAICEWIVAMILFLLYGLFAVDFWHLDGHYFHVKKRTVIPNEMQVSTVTLSI

Annotated regions:
Protein sequence:
MEKIYTWLKTNSYIVHHVSTSLNIISFIIVLIWIFESTIKEKLNIIFTVNLEAIVVFISILIVGLNQLLQKLLIEAEYSPAFALAVGYFKNFIFPAITQIKENGEVNPKICIYKPKHFDELTSTNIDMIKAELTNKKYNLSEINLSLKGARARDILTLNKKSKIHSYFDFPNTLLSLYSYVDFKIASSNNNSSELKKKKFVELLIEQFYLKLNELIQENNLTNNITFCDKNLQGL

Annotated regions:
phrase: PAFALAVGYFKNFIFPAITQIKENGEVNPKICIYKPKHFDELTSTNIDMIKAELTNKKYNLSEINLSLKGARARDILTLNKKSKIHSYFDFPNTLLSLYSYVDFKIASSNNNSSELKKKKFVELLIEQFYLKL
type: DOMAIN
name: Prok_STING
description: Prokaryotic STING domain
Protein sequence:
MGGKWSKSKIPGWPEIRERMRRAEPEPAAEGVGAVSRDLEKHGAVTSSNTAATNAACAWLEAQEEGEEVGFPVRPQVPLRPMTYRAAVDLSHFLREKGGLDGLIYSQKRQDILDLWVYHTQGYFPDWDNYTPGPGIRYPLTFGWCYKLVPVDKDKVEEANEGENNCLLQPISLHGMDDPEGEVLQWKFDSRLAFRHVARDLHPEYYKDC

Annotated regions:
Protein sequence:
MAEEIEKSVPTEESLMEKISEKIHHHDSSSSSESEYEKPDSPSAVKAKIYRMFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLSKIPIASLKAKAKLG

Annotated regions:
phrase: PADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLSKIPIASLKAKA
type: DOMAIN
name: Reticulon
description: Reticulon

phrase: ADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEK
type: DOMAIN
name: Reticulon
description: Reticulon
Protein sequence:
VPTQRLCGSHLVDALYFVCGERGFFYSPKPIRELEPLLGIVEQCCHNTCSLANLEGYCN

Annotated regions:
phrase: QRLCGSHLVDALYFVCGERGFFYSPKPIREL
type: DOMAIN
name: Insulin-like
description: Insulin-like

phrase: GIVEQCCHNTCSLANLEGY
type: DOMAIN
name: Insulin-like
description: Insulin-like

phrase: CCHNTCSLANLEGY
type: CONSERVED_SITE
name: Insulin_CS
description: Insulin, conserved site

phrase: QRLCGSHLVDALYFVCGERGFFYSPKPIRELEPLLGIVEQCCHNTCSLANLEGY
type: DOMAIN
name: Insulin-like
description: Insulin-like
Protein sequence:
MQIRHFLQFKDFDRQEYEYLFDRTRWIKNEFKQYRRYWPLTDRTLAMIFEKHSTRTRLSFEAGMHQLGGSAIYLSTRDTQLGRGEPVEDAARVISRMVDIITLRTHEHGVIERFAENSRVPVINGLTDEYHPCQILADIFTFMEHRGSIAGKTVAWIGDSNNVCNTWLQAAEVFDFNVHVSTPPGYEVEPERAGLYGTDHYEQFVSPHDAVKDADLVTTDVWTSMGFEDEADTRKNDFADFRVDAEMMACAKEEALFMHCLPAHRGEEVDAEVIDGPQSVVWDEAENRLHTQKALMEYLLLGRIGVR

Annotated regions:
phrase: RHFLQFKDFDRQEYEYLFDRTRWIKNEFKQYRRYWPLTDRTLAMIFEKHSTRTRLSFEAGMHQLGGSAIYLSTRDTQLGRGEPVEDAARVISRMVDIITLRTHEHGVIERFAENSRVPVINGLTDEYHPCQILADIFTFM
type: DOMAIN
name: Asp/Orn_carbamoyltranf_P-bd
description: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding

phrase: GKTVAWIGDSNNVCNTWLQAAEVFDFNVHVSTPPGYEVEPERAGLYGTDHYEQFVSPHDAVKDADLVTTDVWTSMGFEDEADTRKNDFADFRVDAEMMACAKEEALFMHCLPAHRGEEVDAEVIDGPQSVVWDEAENRLHTQKALME
type: DOMAIN
name: Asp_carbamoyltransf_Asp/Orn-bd
description: Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain
Protein sequence:
MTTAARPTFEPARGGRGKGESDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRSRDFRRELEERERVAVRDKNRDRPTREHTSSVSKKPRLDQIPAANLDADDPLTDEDADEDSDEDSDDDTAALLAELEKIKKERAEEQVRKELEQKAEEERIRMENILSGNPLLNLTGPAAQSQASFKVKRRWDDDVVFKNCAKGVDEMKKRQDKRFVNDTLRSEFHKKFMEKYVK

Annotated regions:
Protein sequence:
MARKSLIQREKKRRNLEQKYHLIRRSSKQEIRKVTSLSDKWEIHGKLQSPPRNSAPARLHRRCFLTGRPRANIRDFGLSGHILREMVHTCLLPGATRSSW

Annotated regions:
phrase: RRCFLTGRPRANIRDFGLSGHIL
type: CONSERVED_SITE
name: Ribosomal_uS14_CS
description: Small ribosomal subunit protein uS14, conserved site
Protein sequence:
MNEQQRLASQQANSSKKKEEKDYSKYFESVYQPPSLKEAKKRGKEEVKIERDFGLPEEFRNFGTGRKFYIRTYGCQMNEHDTEVMAGIFTALGYEPTFSTEEADVVLLNTCAIRENAENKVFGELGHLKALKRRNPDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNIHRLPYILKDAMFSKETVVEVWSKEGDVIENLPKVRRGDIKAWVNIMYGCDKFCTYCIVPYTRGKERSRRPEDIIQEIRHLAANGYKEITLLGQNVNAYGKDFEDIEYGLGDLMDELRKVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGSTEMLKIMARKYSREHYLELVRKIKEAIPNAVLTTDIIVGFPNETDEQFEETMSLYREVGFDTAFTFIYSPREGTPAAKMKDNVPMEVKKERLQRLNALVNKLAIEKNNRYKGQIVEVLVDGESKNNPEVLAGYTRTNKLVNFVAPKSLIGQLVKVKVTDAKTWSLNGELVEEPIEVE

Annotated regions:
phrase: NRYKGQIVEVLVDGESKNNPEVLAGYTRTNKLVNFVAPKSLIGQLVKVKVTDAKTWSLNGELV
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: RRGDIKAWVNIMYGCDKFCTYCIVPYTRGKERSRRPEDIIQEIRHLAANGYKEITLLGQNVNAYGKDFEDIEYGLGDLMDELRKVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGSTEMLKIMARKYSREHYLELVRKIKEAIPNAVLTTDIIVGFPNETDEQFEETMSLYREVGFDTAFTFIYSPREGTPAAKMKDNVPMEVKKERLQRLNALVNKLAI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: RYKGQIVEVLVDGESKNNPEVLAGYTRTNKLVNFVAPKSLIGQLVKVKVTDAKTWSLNGEL
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: RKFYIRTYGCQMNEHDTEVMAGIFTALGYEPTFSTEEADVVLLNTCAIRENAENKVFGELGHLKALKRRNPDLLIGVCGCMSQEESVVNKIMQKNQHVDMVFGTHNIHRLPYILKDAM
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: IKAWVNIMYGCDKFCTYCIVPYTRGKERSRRPEDIIQEIRHLAANGYKEITLLGQNVNAYGKDFEDIEYGLGDLMDELRKVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGSTEMLKIMARKYSREHYLELVRKIKEAIPNAVLTTDIIVGFPNETDEQFEETMSLYREVGFDTAFTFIYSPREGTPAAKMKDNVPMEVKKERLQRLN
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: VNIMYGCDKFCTYCIVPYTRGKERSRRPEDIIQEIRHLAANGYKEITLLGQNVNAYGKDFEDIEYGLGDLMDELRKVDIARIRFTTSHPRDFDDHLIEVLGKGGNLVEHIHLPVQSGSTEMLKIMARKYSREHYLELVRKIKEAIPNAVLTTDIIVGFPNETDEQFEETMS
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VNIMYGCDKFCTYCIVPYTR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: KFYIRTYGCQMNEHDTEVMAGIFTALGYEPTFSTEEADVVLLNTCAIRENAENKVFGELGHLKALKRRNPDLLIGVCGCMSQEESVVNKIMQKNQHVDMVF
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal
Protein sequence:
MTNTRKNHPLLKIINNSLIDLPTPPNISSLWNFGSLLGACLTIQIITGLFLAMHYTADTMTAFSSVAHICRDVNYGWTIRYLHANGASMFFLCLFIHVGRGLYYGSFTLLETWNVGITLLFSVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDLVEWIWGGFSVGKATLTRFFALHFILPFITSALVMIHLLFLHETGSNNPLGVPSNSDKIPFHPYYTTKDFLGLLLLILLLMTMALFYPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVMALILSILILVMFPFLQPNKQQTMMFRPLSQFLFWILVADLLTLTWIGGQPVEDPFINIGQMASMLYFSLMIFIMPTTCFIENKMLKW

Annotated regions:
phrase: IDLPTPPNISSLWNFGSLLGACLTIQIITGLFLAMHYTADTMTAFSSVAHICRDVNYGWTIRYLHANGASMFFLCLFIHVGRGLYYGSFTLLETWNVGITLLFSVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDLVEWIWGGFSVGKATLTRFFALHFILPFITSALVMIHLLFLHET
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: MTNTRKNHPLLKIINNSLIDLPTPPNISSLWNFGSLLGACLTIQIITGLFLAMHYTADTMTAFSSVAHICRDVNYGWTIRYLHANGASMFFLCLFIHVGRGLYYGSFTLLETWNVGITLLFSVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDLVEWIWGGFSVGKATLTRFFALHFILPFITSALVMIHLLFLHETGSNNP
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: PLLKIINNSLIDLPTPPNISSLWNFGSLLGACLTIQIITGLFLAMHYTADTMTAFSSVAHICRDVNYGWTIRYLHANGASMFFLCLFIHVGRGLYYGSFTLLETWNVGITLLFSVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYVGTDLVEWIWGGFSVGKATLTRFFALHFILPFITSALVMIHLLFLHETGS
type: DOMAIN
name: Cytochrome_b_N_euk/bac
description: Cytochrome b/b6, N-terminal domain, eukaryotic/bacterial

phrase: PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVMALILSILILVMFPFLQPNKQQTMMFRPLSQFLFWILVADLLTLTWIGGQPVEDPFINIGQMASMLY
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: NPLGVPSNSDKIPFHPYYTTKDFLGLLLLILLLMTMALFYPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVMALILSILILVMFPFLQPNKQQTMMFRPLSQFLFWILVADLLTLTWIGGQPVEDPFINIGQM
type: DOMAIN
name: Cytochrome_b_C_euk/bac
description: Cytochrome b/b6, C-terminal domain, eukaryotic/bacterial

phrase: GVPSNSDKIPFHPYYTTKDFLGLLLLILLLMTMALFYPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVMALILSILILVMFPFLQPNKQQTMMFRPLSQFLFWILVADLLTLTWIGGQPVEDPFINIGQMASMLYFSLMIFIMPTTCFIENKMLK
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal
Protein sequence:
MAFLALGINHKTASVDVRERVAFTPEQLVDALQQLCRLTASREAAILSTCNRSELYIEQDHIAADAVLQWLADYHQLSLDELRASAYIHEEHDAVRHMMRVASGLDSLVLGEPQILGQMKSAYAVAREAGTVGPLLGRLFQATFSAAKQVRTDTAIGENPVSVAFAAVSLAKQIFSDLGRSQALLIGAGETITLVARHLHEQGVRRIVVANRTLERASILAEQFGAHAVLLADIPQELANSDIVISSTASQLPILGKGAVESALKQRRHKPIFMVDIAVPRDIEPQVGELDDVYLYTVDDLHEVVAENLKSRQGAAQAAEELVSAGADDFMVRLRELAAVDVLKAYRQQSERLRDEELQKALRLLGNGGNPEDVLMQLARGLTNKLLHAPSVQLKKLSAEGRLDALAMAQELFALHEGSTDKTPQ

Annotated regions:
phrase: LGINHKTASVDVRERVAFTPEQLVDALQQLCRLTASREAAILSTCNRSELYIEQDHIAADAVLQWLADYHQLSLDELRASAYIHEEHDAVRHMMRVASGLDSLVLGEPQILGQMKSAYAVAREAGTVGPLLGRLFQATFSAAKQVRTD
type: DOMAIN
name: 4pyrrol_synth_GluRdtase_N
description: Glutamyl-tRNA reductase, N-terminal

phrase: HMMRVASGLDSLVLGEPQILGQM
type: CONSERVED_SITE
name: GluRdtase_CS
description: Glutamyl-tRNA reductase, conserved site

phrase: AAEELVSAGADDFMVRLRELAAVDVLKAYRQQSERLRDEELQKALRLLGNGGNPEDVLMQLARGLTNKLLHAPSVQLKKLSAEGRLDALAMAQELFA
type: DOMAIN
name: 4pyrrol_synth_GluRdtase_dimer
description: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain

phrase: LAKQIFSDLGRSQALLIGAGETITLVARHLHEQGVRRIVVANRTLERASILAEQFGAHAVLLADIPQELANSDIVISSTASQLPILGKGAVESALKQRRHKPIFMVDIAVPRDIEPQVGELDDVYLYTVDDLHE
type: DOMAIN
name: Shikm_DH/Glu-tRNA_Rdtase
description: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase
Protein sequence:
MPSLYGLERSGDVEKLVELLQESEKETVRRRAAEILGNLDEPEPEGIQALVDAMSDDDESVRAAAIDALTQQEAVDALMRGLDQEVPDSGATWAQAEAFVENLESETPELRMAAANVLGLLGVEDTARPLAKQLQTEEHVGVRARVARALGRIEQPAVTGILVDCLHGEPLKVRREAAESLGRLTTEQALDGLLSVVEDDSEAMRRTAVSSLGRFETAEPVDALVERLGDESDLVRRAAVFSLIEILSNVPPDQSHELRETIVDRMSARSDPSIIKSLIEIIDEGTQLHQRRNATWMLGRVAGDQRTKMDAIEALRELLGEDDDLIAQFAATGLAEIGGASVETSLLEVVETQEYGEDAVAMAAFALGKVGGDRSRQRLERLVDETDSEEVRRRAFSAISKLGGKT

Annotated regions:
phrase: GDVEKLVELLQESEKETVRRRAAEILGN
type: REPEAT
name: Armadillo
description: Armadillo

phrase: ESVRAAAIDALTQQEAVDALMRGLDQ
type: REPEAT
name: PBS_lyase_HEAT
description: PBS lyase HEAT-like repeat

phrase: LHQRRNATWMLGRVAGDQRTKMDAIEALRELLGE
type: REPEAT
name: PBS_lyase_HEAT
description: PBS lyase HEAT-like repeat

phrase: ETVRRRAAEILGNLDEPEPEGIQALVDAMSD
type: REPEAT
name: PBS_lyase_HEAT
description: PBS lyase HEAT-like repeat

phrase: VGVRARVARALGRIEQPAVTGILVDCLHG
type: REPEAT
name: PBS_lyase_HEAT
description: PBS lyase HEAT-like repeat

phrase: PELRMAAANVLGLLGVEDTARPLAKQLQT
type: REPEAT
name: PBS_lyase_HEAT
description: PBS lyase HEAT-like repeat

phrase: EDAVAMAAFALGKVGGDRSRQRLERLVDE
type: REPEAT
name: PBS_lyase_HEAT
description: PBS lyase HEAT-like repeat

phrase: LKVRREAAESLGRLTTEQALDGLLSVVED
type: REPEAT
name: PBS_lyase_HEAT
description: PBS lyase HEAT-like repeat

phrase: EAMRRTAVSSLGRFETAEPVDALVERLGD
type: REPEAT
name: PBS_lyase_HEAT
description: PBS lyase HEAT-like repeat
Protein sequence:
MNFKKTLLSIAIASASLTPAFSYSAPLLLDNTVHQTSQIAGANAWLEISLGQFKSNIEQFKSHIAPQTKICAVMKADAYGNGIRGLMPTILEQQIPCVAIASNAEAKLVRESGFEGELIRVRSASTSEIEQALSLDIEELIGSEQQARELASLAEKYSKTIKVHLALNDGGMGRNGIDMSTERGPKEAVAIATHPSVAVVGIMTHFPNYNAEDVRTKLKSFNQHAQWLMESAGLKREEITLHVANSYTALNVPEAQLDMVRPGGVLYGDLPTNPEYPSIVAFKTRVASLHSLPAGSTVGYDSTFTTANDAVMANLTVGYSDGYPRKMGNKAQVLINGQRANVVGVASMNTTMVDVSNIKGVLPGDEVTLFGAQKNQHISVGEMEENAEVIFPELYTIWGTSNPRFYVK

Annotated regions:
phrase: VAFKTRVASLHSLPAGSTVGYDSTFTTANDAVMANLTVGYSDGYPRKMGNKAQVLINGQRANVVGVASMNTTMVDVSNIKGVLPGDEVTLFGAQKNQHISVGEMEENAEVIFPELYTIWGTSNPRF
type: DOMAIN
name: Ala_racemase_C
description: Alanine racemase, C-terminal

phrase: ISLGQFKSNIEQFKSHIAPQTKICAVMKADAYGNGIRGLMPTILEQQIPCVAIASNAEAKLVRESGFEGELIRVRSASTSEIEQALSLDIEELIGSEQQARELASLAEKYSKTIKVHLALNDGGMGRNGIDMSTERGPKEAVAIATHPSVAVVGIMTHFPNYNAEDVRTKLKSFNQHAQWLMESAGLKREEITLHVANSYTALNVPEAQLDMVRPGGVLYGDL
type: DOMAIN
name: Ala_racemase_N
description: Alanine racemase, N-terminal

phrase: IVAFKTRVASLHSLPAGSTVGYDSTFTTANDAVMANLTVGYSDGYPRKMGNKAQVLINGQRANVVGVASMNTTMVDVSNIKGVLPGDEVTLFGAQKNQHISVGEMEENAEVIFPELYTIWGTSNPRFY
type: DOMAIN
name: Ala_racemase_C
description: Alanine racemase, C-terminal

phrase: AVMKADAYGN
type: BINDING_SITE
name: Ala_racemase_pyridoxalP-BS
description: Alanine racemase, pyridoxal-phosphate attachment site
Protein sequence:
MDAMQKTIEYTSVSRIAGPLMVIDGIEGIAYGEIVDITTPNGDKRTGQVLEAREEIAVVQVFEGTSELNTSETKVRFTGDTAKIGVSYDMLGRIFNGAGKPLDGGPEIIAEKKLDINGYPLNPVSRNPPNAFVQTGISTIDGTNTLVRGQKIPIFSGSGLPHNKLATQIARQAKVRGEGEQFAVVFAAMGITGEESNYFMDEFKKTGALEKAVVFINLADDPAIERILTPRIALTTAEYLAYEKGMHVLVILTDLTNYCEALREIAAARNEVPGRRGYPGYMYTDLACLYERAGRVKGREGTVTQIPILTMPDDDITHPIPDLTGYITEGQIVLSRELNRKGIYPPVDILPSLSRLAGNGQGEGKTRDDHSKVISQAYAAYAEGRGLRDLVAVVGEEALTERDRSFLKFADAFENSIVTQGVDEDRSIEETLDYVWDLLTILPREELKRVSDELIEKYLPKK

Annotated regions:
phrase: PPVDILPSL
type: ACTIVE_SITE
name: ATPase_a/bsu_AS
description: ATPase, alpha/beta subunit, nucleotide-binding domain, active site

phrase: GISTIDGTNTLVRGQKIPIFSGSGLPHNKLATQIARQAKVRGEGEQFAVVFAAMGITGEESNYFMDEFKKTGALEKAVVFINLADDPAIERILTPRIALTTAEYLAYEKGMHVLVILTDLTNYCEALREIAAARNEVPGRRGYPGYMYTDLACLYERAGRVKGREGTVTQIPILTMPDDDITHPIPDLTGYITEGQIVLSRELNRKGIYPPVDILPSL
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_nucl-bd
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain

phrase: GQGEGKTRDDHSKVISQAYAAYAEGRGLRDLVAVVGEEALTERDRSFLKFADAFENSIVTQGVDEDRSIEETLDYVWDLLTILPREELKRVSDELIEK
type: DOMAIN
name: ATP-synt_VA_C
description: ATP synthase A/B type, C-terminal domain

phrase: VSRIAGPLMVIDGIEGIAYGEIVDITTPNGDKRTGQVLEAREEIAVVQVFEGTSELNTSETKVRFT
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_N
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain
Protein sequence:
MNPNQKIITIGSICMVVGIISLMLQIGNIISVWVSHIIQTWHPNQPEPCNQSINFYTEQAAASVTLAGNSSLCPISGWAIYSKDNSIRIGSKGDVFVIREPFISCSHLECRTFFLTQGALLNDKHSNGTVKDRSPYRTLMSCPVGEAPSPYNSRFESVAWSASACHDGISWLTIGISGPDNGAVAVLKYNGIITDTIKSWRNNILRTQESECACVNGSCFTVMTDGPSNEQASYKIFKIEKGRVVKSVELNAPNYHYEECSCYPDAGEITCVCRDNWHGSNRPWVSFNQNLEYQIGYICSGVFGDSPRPNDGTGSCGPVSLNGAYGVKGFSFKYGNGVWIGRTKSTSSRSGFEMIWDPNGWTETDSSFSLKQDIIAITDWSGYSGSFIQHPELTGLNCMRPCFWVELIRGRPKEKTIWTSGSSISFCGVNSDTVGWSWPDGADLPFTIDK

Annotated regions:
phrase: LAGNSSLCPISGWAIYSKDNSIRIGSKGDVFVIREPFISCSHLECRTFFLTQGALLNDKHSNGTVKDRSPYRTLMSCPVGEAPSPYNSRFESVAWSASACHDGISWLTIGISGPDNGAVAVLKYNGIITDTIKSWRNNILRTQESECACVNGSCFTVMTDGPSNEQASYKIFKIEKGRVVKSVELNAPNYHYEECSCYPDAGEITCVCRDNWHGSNRPWVSFNQNLEYQIGYICSGVFGDSPRPNDGTGSCGPVSLNGAYGVKGFSFKYGNGVWIGRTKSTSSRSGFEMIWDPNGWTETDSSFSLKQDIIAITDWSGYSGSFIQHPELTGLNCMRPCFWVELIRGRPKEKTIWTSGSSISFCGVNSDTVGWSWPDGADLP
type: DOMAIN
name: Sialidase_Influenza_A/B
description: Sialidase, Influenza viruses A/B
Protein sequence:
MSLTGLPDIRKKIGQFHHLRIYKQILSLQGNFARLNYFLGDVFPANLRSASVSVFFEVRLGPRIPDCIVLLKSVDAKDEFAFHCYFFEFKTTLGKSTMQSVHHNCIHQAQYLQGLRQLHQSISFLDQYLIADEVLWNVVPVICFFRQWGLKLDFFKKFSGKTKRLSFSFICDLFARSQDGAVQSLLSIPNYTNFRRACQKHTDLYRRRYQKASKSVLTKTSGENRSRASRQVAKNAPKNRIRRTAKKDAKRQ

Annotated regions:
Protein sequence:
MELITNVSEYEQLAKQKLPKMIYDYYASGAEDQWTLKENREAFSRILFRPRILIDVSRINMATNVLGFNISMPIMIAPSAMQKMAHPEGELATARAASAAGTIMTLSSWSTSSVEEVNSAAPGIRFFQLYVYKDRNIVRQLVRRAELAGFKAIALTVDTPRLGRREADIKNRFNLPPHLVLKNFEALDLGKMDKTNDSGLASYVASQVDRSLSWTDVKWLQTITSLPILVKGVMTAEDTRLAVESGAAGIIVSNHGARQLDYVPATISCLEEVVREAKGRLPVFLDGGVRRGTDVFKALALGASGVFIGRPVLFSLAVDGEAGVRKVLQMLRDELELTMALSGCTSLAEITRNHVITDSDRIRRSRL

Annotated regions:
phrase: MELITNVSEYEQLAKQKLPKMIYDYYASGAEDQWTLKENREAFSRILFRPRILIDVSRINMATNVLGFNISMPIMIAPSAMQKMAHPEGELATARAASAAGTIMTLSSWSTSSVEEVNSAAPGIRFFQLYVYKDRNIVRQLVRRAELAGFKAIALTVDTPRLGRREADIKNRFNLPPHLVLKNFEALDLGKMDKTNDSGLASYVASQVDRSLSWTDVKWLQTITSLPILVKGVMTAEDTRLAVESGAAGIIVSNHGARQLDYVPATISCLEEVVREAKGRLPVFLDGGVRRGTDVFKALALGASGVFIGRPVLFSLAVDGEAGVRKVLQMLRDELELTMALSGCTSLAEITRNHVITDS
type: DOMAIN
name: FMN_HAD
description: FMN hydroxy acid dehydrogenase domain

phrase: AKQKLPKMIYDYYASGAEDQWTLKENREAFSRILFRPRILIDVSRINMATNVLGFNISMPIMIAPSAMQKMAHPEGELATARAASAAGTIMTLSSWSTSSVEEVNSAAPGIRFFQLYVYKDRNIVRQLVRRAELAGFKAIALTVDTPRLGRREADIKNRFNLPPHLVLKNFEALDLGKMDKTNDSGLASYVASQVDRSLSWTDVKWLQTITSLPILVKGVMTAEDTRLAVESGAAGIIVSNHGARQLDYVPATISCLEEVVREAKGRLPVFLDGGVRRGTDVFKALALGASGVFIGRPVLFSLAVDGEAGVRKVLQMLRDELELTMALSGCTSLAEITRNH
type: DOMAIN
name: FMN-dep_DH
description: FMN-dependent dehydrogenase

phrase: SNHGAR
type: ACTIVE_SITE
name: FMN_hydac_DH_AS
description: FMN-dependent alpha-hydroxy acid dehydrogenase, active site