nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSITKDQIIEAVASMSVMEVVELITAMEEKFGVSAAAVAAGPAAAAEAVEEQTEFNVMLTAIGANKVAVIKAVRAATSLGLKEAKDLVEAAPTAVKEAVSKDEAEALKKELEAAGASVEIK

Annotated regions:
phrase: TKDQIIEAVASMSVMEVVELITAMEEKFGVSAAAVAAGPAAAAE
type: DOMAIN
name: Ribosomal_bL12_oligo
description: Large ribosomal subunit protein bL12, oligomerization

phrase: FNVMLTAIGANKVAVIKAVRAATSLGLKEAKDLVEAAPTAVKEAVSKDEAEALKKELEAAGASVEI
type: DOMAIN
name: Ribosomal_bL12_C
description: Large ribosomal subunit protein bL12, C-terminal
Protein sequence:
MYLANFELKDFRNFKELKTDFDPHVNIFIGPNAQGKTNLLEAIYFLALTRSHRTNSDKELIRFGSKFAGLQGRVHKSQLQVELKLRLTANGKKAWVNRLEQKKLSAYVGQMNAILFSPEDLALVKGAPSVRRRFMDLEFGQINSEYLYFSSQYRQVLQQRNNYLKQLSIKKANDQVFLDVLSDQLAGIAAEIISRRIKYIKKLNSYAKAAHSEISGQAEKLQIFYRPSVKEIIPEDNVETIYRKVITSYKKNRPNEIRKGTTLSGPHRDDLEFLINEKNAHDFASQGQQRTISLSVKLAEIQLVHELTQEYPILLLDDVMSELDHRRQSRLLNYIHGKTQTFITTTDLEGISWEIVKEPKVYHISAGTISAKES

Annotated regions:
phrase: ILLLDDVMSELDHRRQSR
type: CONSERVED_SITE
name: DNA-binding_RecF_CS
description: DNA-binding, RecF, conserved site

phrase: FSPEDLALVKGAPSVRRRFM
type: CONSERVED_SITE
name: DNA-binding_RecF_CS
description: DNA-binding, RecF, conserved site

phrase: YLANFELKDFRNFKELKTDFDPHVNIFIGPNAQGKTNLLEAIYFLALTRSHRTNSDKELIRFGSKFAGLQGRVHKSQLQVELKLRLTANGKKAWVNRLEQKKLSAYVGQMNAILFSPEDLALVKGAPSVRRRFMDLEFGQINSEYLYFSSQYRQVLQQRNNYLKQLSIKKANDQVFLDVLSDQLAGIAAEIISRRIKYIKKLNSYAKAAHSEISGQAEKLQIFYRPSVKEIIPEDNVETIYRKVITSYKKNRPNEIRKGTTLSGPHRDDLEFLINEKNAHDFASQGQQRTISLSVKLAEIQLVHELTQEYPILLLDDVMSELDHRRQSRLLNYIHGKTQTFITTT
type: DOMAIN
name: RecF/RecN/SMC_N
description: RecF/RecN/SMC, N-terminal
Protein sequence:
MKKHHVDVLISENDVHARIAELGAQITKFYQEKQIDNLVVVGLLRGSFMFMADIVRQINLPVEIEFMTTSSYGTGMTTNHDVRITKDLDGDIKGKHVLIVEDIIDTGYTLEKVRDILNLREPASLTICTLLDKPSRREVEVPVEWVGFEIPDEFVVGYGIDYAQRHRNLGYIGKVVLEE

Annotated regions:
phrase: IAELGAQITKFYQEKQIDNLVVVGLLRGSFMFMADIVRQINLPVEIEFMTTSSYGTGMTTNHDVRITKDLDGDIKGKHVLIVEDIIDTGYTLEKVRDILNLREPASLTICTLLDKPSRREVEVPVEWVGFEIPDEFVVGYGID
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: LGAQITKFYQEKQIDNLVVVGLLRGSFMFMADIVRQINLPVEIEFMTTSSYGTGMTTNHDVRITKDLDGDIKGKHVLIVEDIIDTGYTLEKVRDILNLREPASLTICTLLDKPSRREV
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain
Protein sequence:
MTKQFTMEDRFNPSAVEQALYQHWESRGYFKPSEDINAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGNNTLWQTGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWDRERFTMDEGLSNAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPLANGAKTAEGLDYLVVATTRPETMLGDTAVAVHPEDERYQSLIGKTVVLPLANREIPIIADEYVDREFGTGVVKITPAHDFNDYEVGKRHGLPMVNVMTLNADIRAEAEIIGTDGKPLAGYDAPIPADYQGLERFVARKKIVADFEALGLLDQIKPHDLKVPYGDRGGVPIEPMLTDQWYVSVKPLAEVATKAVENGEIQFVPKQYENLYFSWMRDIQDWCISRQLWWGHRIPAWYDEQGNVYVARDEAEVRSKYGLTSDVALKQDEDVLDTWFSSGLWTFSTLGWPEQTKELKMFHPTDVLITGFDIIFFWVARMIMFTMHFIKDENGKPQVPFKTVYVTGLIRDEQGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFEHGISAHGTDALRFTLAALASNGRDINWDMKRLEGYRNFCNKLWNASRYVLTHEKLDLSEGEAEYSLADRWIESQFNRTIDAFRTALKQYRFDLVANTIYDFTWNQFCDWYLELTKPVFAHGTDAQKRGTSRMLLNILEKLLRLAHPIIPFITEEIWQKLKGVMKLSGDTIMLQPFPHAEESKFDPVAESQMDWLKEVIVAVRNIRAECNISPSHALELLLRNISEETKICLENNRTLLQSMAKLSTITLLDANEEPPLSVTKLVENNEIFIPMAGFINKEQELTRLTKEIEKLKGEIVRIENKLSNEAFITKAPEQVIAKEREKMQGYLDNIEKLQQQYQAIETL

Annotated regions:
phrase: WDMKRLEGYRNFCNKLWNASRYVLTHEKLDLSEGEAEYSLADRWIESQFNRTIDAFRTALKQYRFDLVANTIYDFTWNQFCDWYLELTKPVFAHGTDAQKRGTSRMLLNILEKLLRLAHPIIPFITEEIWQK
type: DOMAIN
name: Anticodon_Ia_Val
description: Valyl tRNA synthetase, anticodon-binding domain

phrase: DRWIESQFNRTIDAFRTALKQYRFDLVANTIYDFTWNQFCDWYLELTKPVFAHGTDAQKRGTSRMLLNILEKLLRLAHPIIPFITEEIWQKLKGVMKLSGDTIMLQPFPHAEESKFDPVAESQMDWLKEVIVAVRNIRAECNISPSHALE
type: DOMAIN
name: M/V/L/I-tRNA-synth_anticd-bd
description: Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding

phrase: EQELTRLTKEIEKLKGEIVRIENKLSNEAFITKAPEQVIAKEREKMQGYLDNIEKLQQQYQA
type: DOMAIN
name: Val-tRNA_synth_tRNA-bd
description: Valyl-tRNA synthetase, tRNA-binding arm

phrase: PNVTGSLHMGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: LYQHWESRGYFKPSEDINAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGNNTLWQTGTDHAGIATQMVVERKIAAEEGKTRHDYGREAFINKIWDWKAYSGGTISQQMRRLGNSIDWDRERFTMDEGLSNAVKEVFVRLHEEGLIYRGKRLVNWDPKLHTAISDLEVENKESKGSLWHFRYPLANGAKTAEGLDYLVVATTRPETMLGDTAVAVHPEDERYQSLIGKTVVLPLANREIPIIADEYVDREFGTGVVKITPAHDFNDYEVGKRHGLPMVNVMTLNADIRAEAEIIGTDGKPLAGYDAPIPADYQGLERFVARKKIVADFEALGLLDQIKPHDLKVPYGDRGGVPIEPMLTDQWYVSVKPLAEVATKAVENGEIQFVPKQYENLYFSWMRDIQDWCISRQLWWGHRIPAWYDEQGNVYVARDEAEVRSKYGLTSDVALKQDEDVLDTWFSSGLWTFSTLGWPEQTKELKMFHPTDVLITGFDIIFFWVARMIMFTMHFIKDENGKPQVPFKTVYVTGLIRDEQGQKMSKSKGNVLDPIDMIDGISLEDLLEKRTGNMMQPQLAEKIAKATRKEFEHGISAHGTDALRFTLAALASNGRDINW
type: DOMAIN
name: aa-tRNA-synth_Ia
description: Aminoacyl-tRNA synthetase, class Ia
Protein sequence:
MSRIGNKVIVLPAGVELANNDNVVTVKGPKGELTREFSKDIEIRVEGTEITLHRPNDSKEMKTIHGTTRALLNNMVVGVSEGFKKELEMRGVGYRAQLQGSKLVLAVGKSHPDEVEAPEGITFELPNPTTIVVSGISKEVVGQTAAYVRSLRSPEPYKGKGIRYVGEFVRRKEGKTGK

Annotated regions:
phrase: GVGYRAQLQGSKLVLAVGKSHPDEVEAPEGITFELPNPTTIVVSGISKEVVGQTAAYVRSLRSPEPYKGKGIR
type: DOMAIN
name: Ribosomal_uL6_a/b-dom
description: Large ribosomal subunit protein uL6, alpha-beta domain

phrase: PAGVELANNDNVVTVKGPKGELTREFSKDIEIRVEGTEITLHRPNDSKEMKTIHGTTRALLNNMVVGVSE
type: DOMAIN
name: Ribosomal_uL6_a/b-dom
description: Large ribosomal subunit protein uL6, alpha-beta domain

phrase: PEPYKGKG
type: CONSERVED_SITE
name: Ribosomal_uL6_CS
description: Large ribosomal subunit protein uL6, conserved site
Protein sequence:
MINIRKTHPLMKIVNNAFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTXDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNMGVILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNPTGIPSDADKIPFHPYYTIKDILGAMMLILSLMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLAXVLSILILVLVPFLHTSKQRSMMFRPISQCMFWILVADLLTLTWIGGQPVEHPYIXIGQLASIMYFLIILVMMPVASTIENNLLKW

Annotated regions:
phrase: GIPSDADKIPFHPYYTIKDILGAMMLILSLMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLAXVLSILILVLVPFLHTSKQRSMMFRPISQCMFWILVADLLTLTWIGGQPVEHPYIXIGQLASIMYFLIILVMMPVASTIENNLLK
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: IDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTXDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNMGVILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHET
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: PLMKIVNNAFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTXDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNMGVILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGS
type: DOMAIN
name: Cytochrome_b_N_euk/bac
description: Cytochrome b/b6, N-terminal domain, eukaryotic/bacterial

phrase: PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLAXVLSILILVLVPFLHTSKQRSMMFRPISQCMFWILVADLLTLTWIGGQPVEHPYIXIGQLASIMY
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: NPTGIPSDADKIPFHPYYTIKDILGAMMLILSLMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLAXVLSILILVLVPFLHTSKQRSMMFRPISQCMFWILVADLLTLTWIGGQPVEHPYIXIGQL
type: DOMAIN
name: Cytochrome_b_C_euk/bac
description: Cytochrome b/b6, C-terminal domain, eukaryotic/bacterial

phrase: MINIRKTHPLMKIVNNAFIDLPTPSNISSWWNFGSLLGICLILQILTGLFLAMHYTXDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFLETWNMGVILLLTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAMVHLLFLHETGSNNP
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain
Protein sequence:
MSTERDSETTFDEESQPNDEVVPYSDDETEDELEDQGSTVEPEQNRVNREAEKKRETFRKDCTWQVKANDRKFHEQPHFMNTKFFCIKESKYASNAIKTYKYNGFTFLPMNLFEQFKRAANFYFLILLILQAIPQISTLAWYTTLVPLLLVLGITAIKDLVDDVARHKMDKEINNRTCEVIKDGRFKIIKWKDIQVGDVIRLKKNDFIPADILLLSSSEPNSLCYVETAELDGETNLKFKMALEITDQYLQIEDNLATFDGFIECEEPNNRLDKFTGTLFWKNQSFPLDADKILLRGCVIRNTDVCHGLVIFAGADTKIMKNSGKTRFKRTKIDYLMNYMVYTIFIVLILVSAGLAIGHAYWEAQVGNYSWYLYDGENATPSYRGFLNFWGYIIVLNTMVPISLYVSVEVIRLGQSHFINWDLQMYYAEKDTPAKARTTTLNEQLGQIHYIFSDKTGTLTQNIMTFKKCCINGTIYGDHRDASQHSHSKIELVDFSWNTFADGKLAFYDHYLIEQIQSGKEPEVRQFFFLLSICHTVMVDRIDGQINYQAASPDEGALVNAARNFGFAFLARTQNTITVSELGSERTYNVLAILDFNSDRKRMSIIVRTPEGSIRLYCKGADTVIYERLHRMNPTKQETQDALDIFASETLRTLCLCYKEIEEKEFTEWNNKFMAASVASSNRDEALDKVYEEIEKDLILLGATAIEDKLQDGVPETISKLAKADIKIWVLTGDKKETAENIGFACELLTEDTTICYGEDINSLLHTRMENQRNRGGVSAKFAPPVYEPFFPPGENRALIITGSWLNEILLEKKTKRSKILKLKFPRTEEERRMRSQSRRRLEEKKEQRQKNFVDLACECSAVICCRVTPKQKAMVVDLVKRYKKAITLAIGDGANDVNMIKTAHIGVGISGQEGMQAVMSSDYSFAQFRYLQRLLLVHGRWSYIRMCKFLRYFFYKNFAFTLVHFWYSFFNGYSAQTAYEDWFITLYNVLYSSLPVLLMGLLDQDVSDKLSLRFPGLYVVGQRDLLFNYKRFFVSLLHGVLTSMVLFFIPLGAYLQTVGQDGEAPSDYQSFAVTVASALVITVNFQIGLDTSYWTFVNAFSIFGSIALYFGIMFDFHSAGIHVLFPSAFQFTGTASNALRQPYIWLTIILTVAVCLLPVVAIRFLSMTIWPSESDKIQKHRKRLKAEEQWKRRQSVFRRGVSSRRSAYAFSHQRGYADLISSGRSIRKKRSPLDAIIADGTAEYRRTVES

Annotated regions:
phrase: ARTTTLNEQLGQIHYIFSDKTGTLTQNIMTFKKCCINGTIYGDHRDASQHSHSKIELVDFSWNTFADGKLAFYDHYLIEQIQSGKEPEVRQFFFLLSICHTVMVDRIDGQINYQAASPDEGALVNAARNFGFAFLARTQNTITVSELGSERTYNVLAILDFNSDRKRMSIIVRTPEGSIRLYCKGADTVIYERLHRMNPTKQETQDALDIFASETLRTLCLCYKEIEEKEFTEWNNKFMAASVASSNRDEALDKVYEEIEKDLILLGATAIEDKLQDGVPETISKLAKADIKIWVLTGDKKETAENIGFACELLTEDTTICYGEDINSLLHTRMENQRNRGGVSAKFAPPVYEPFFPPGENRALIITGSWLNEILLEKKTKRSKILKLKFPRTEEERRMRSQSRRRLEEKKEQRQKNFVDLACECSAVICCRVTPKQKAMVVDLVKRYKKAITLAIGDGANDVNMIKTAHIGVGISGQEGMQAVMSSDYSFAQFRYLQRLLLVHGR
type: DOMAIN
name: P_typ_ATPase_HD_dom
description: P-type ATPase, haloacid dehalogenase domain

phrase: ANDRKFHEQPHFMNTKFFCIKESKYASNAIKTYKYNGFTFLPMNLFEQFKRAANFYFLILLILQAIPQISTLAWYTT
type: DOMAIN
name: P-type_ATPase_N
description: P-type ATPase, N-terminal

phrase: VMSSDYSFAQFRYLQRLLLVHGRWSYIRMCKFLRYFFYKNFAFTLVHFWYSFFNGYSAQTAYEDWFITLYNVLYSSLPVLLMGLLDQDVSDKLSLRFPGLYVVGQRDLLFNYKRFFVSLLHGVLTSMVLFFIPLGAYLQTVGQDGEAPSDYQSFAVTVASALVITVNFQIGLDTSYWTFVNAFSIFGSIALYFGIMFDFHSAGIHVLFPSAFQFTGTASNALRQPYIWLTIILTVAVCLLPVVAIRFLSMTIWP
type: DOMAIN
name: P_typ_ATPase_c
description: P-type ATPase, C-terminal

phrase: DKTGTL
type: PTM
name: ATPase_P-typ_P_site
description: P-type ATPase, phosphorylation site
Protein sequence:
MSAPTPPQTGQFQVATSAQRSPVAVNIVNYLFQNPILKQRTGLLDNTNDIEFFRFKRLQRALLSDDYKQKQQNPKNGLIPVANNEDVQKVFVLLIQNQLLLPLQKLHYAEVKAVKGWKPNKEKPTLKRADKAVMDPDVYYGWLYQKPNPYILLYSFLAIAGVFAVILFPLWPNFMKRGVWYLSMGALGLIALFFATAIVRLIIYIISLVAFPKPFWLFPNLFEDCGVIESFQPVYAWEEPKKKKGKKKKEPKLEVVEEKVGSSSGDVKVTGSELSNGSSTTGKRKVTLEEVEE

Annotated regions:
Protein sequence:
MHVLVLGAGQLARMMSLAGAPLNIQISAYDVTTGDVVHPLTLHLLGHGLEQAIEYVDVITAEFEHIPHDVLAICQASGKFLPSSEAIKAGGDRRLEKALLDHAGVRNANYYVIETREDFNKAIEHVGIPMVLKSALGGYDGKGQWRLKDAAQIETLWQEMAACIAATPTQAIVAEEFVPFQREVSLIGARGKEGQIEVYPLAENIHVNGVLSLSTAIDSPDLQEQAKHMFTAVAETLNYVGVLALEFFDVDGQLLVNEIAPRVHNSGHWTQQGAETCQFENHLRAVCGLPLGSTKLVRETSMINILGEDTLPASVMAMDGCHIHWYGKEKRAGRKMGHINVCGDYSGELQRRLCALANVLDEKAFPAVHEFAKKWQA

Annotated regions:
phrase: KALLDHAGVRNANYYVIETREDFNKAIEHVGIPMVLKSALGGYDGKGQWRLKDAAQIETLWQEMAACIAATPTQAIVAEEFVPFQREVSLIGARGKEGQIEVYPLAENIHVNGVLSLSTAIDSPDLQEQAKHMFTAVAETLNYVGVLALEFFDVDGQLLVNEIAPRVHNSGHWTQQGAETCQFENHLRAV
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold

phrase: HVLVLGAGQLARMMSLAGAPLNIQISAYDVTTGDVVHPLTLHLLGHGLEQAIEYVDVITAEFEHIPHDVLAICQASGKFLPSSEAIKAGGDRRLEKALLDHAGVRNANYYVIETREDFNKAIEHVGIPMVLKSALGGYDGKGQWRLKDAAQIETLWQEMAACIAATPTQAIVAEEFVPFQREVSLIGARGKEGQIEVYPLAENIHVNGVLSLSTAIDSPDLQEQAKHMFTAVAETLNYVGVLALEFFDVDGQLLVNEIAPRVHNSGHWTQQGAETCQFENHLRAVCGLPLGSTKLVRETSMINILGEDTLPASVMAMDGCHIHWYGKEKRAGRKMGHINVCGDYSGEL
type: DOMAIN
name: PurK
description: Phosphoribosylaminoimidazole carboxylase, ATPase subunit

phrase: VLVLGAGQLARMMSLAGAPLNIQISAYDVTTGDVVHPLTLHLLGHGLEQAIEYVDVITAEFEHIPHDVLAICQASGKFLPSSEAI
type: DOMAIN
name: PurT/PurK_preATP-grasp
description: PurT/PurK-like, preATP-grasp domain

phrase: LDHAGVRNANYYVIETREDFNKAIEHVGIPMVLKSALGGYDGKGQWRLKDAAQIETLWQEMAACIAATPTQAIVAEEFVPFQREVSLIGARGKEGQIEVYPLAENIHVNGVLSLSTAIDSPDLQEQAKHMFTAVAETLNYVGVLALEFFDVDGQLLVNEIAPRVHNSGHWTQQGAETCQ
type: DOMAIN
name: ATP-grasp_carboxylate-amine
description: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type

phrase: HVLVLGAGQLARMMSLAGAPLNIQISAYDVTTGDVVHPLTLHLLGHGLEQAIEYVDVITAEFEHIPHDVLAICQASGKFLPSSEAIKAGGDRRLEKALLDHAGVRNANYYVIETREDFNKAIEHVGIPMVLKSALGGYDGKGQWRLKDAAQIETLWQEMAACIAATPTQAIVAEEFVPFQREVSLIGARGKEGQIEVYPLAENIHVNGVLSLSTAIDSPDLQEQAKHMFTAVAETLNYVGVLALEFFDVDGQLLVNEIAPRVHNSGHWTQQGAETCQFENHLRAVCGLPLGSTKLVRETSMINILGEDTLPASVMAMDGCHIHWYGKEKRAGRKMGHINVCGDY
type: DOMAIN
name: PurK
description: Phosphoribosylaminoimidazole carboxylase, ATPase subunit

phrase: TSMINILGEDTLPASVMAMDGCHIHWYGKEKRAGRKMGHINVCGDYSGELQR
type: DOMAIN
name: PurK_C
description: Phosphoribosylaminoimidazole carboxylase, C-terminal domain
Protein sequence:
MKVKCTVSYDGTHFKGYQVQPGQRTVQTEIESALAKMHKQDELVPIVASGRTDSGVHAKGQVIHFDTPLSIPMERWPFALNSLLPDDIRVLKAEEVDESFHARFSVVSKEYRYKVSTETHQNVFTRQYACHFPYRLDADKMREAAGYLIGTHDFTSFCAANTEVQDKVREIYTLEWKNVSDGLEMRVRGNGFLYNMVRIIAGTLLEVGSGKFHPDEIKAMLAARNREAAGKTAPSHGLYLWEVFYDN

Annotated regions:
phrase: AAGYLIGTHDFTSFCAANTEVQDKVREIYTLEWKNVSDGLEMRVRGNGFLYNMVRIIAGTLLEVGSGKFHPDEIKAMLAARNREAAGKTAPSHGLYLWEVFY
type: DOMAIN
name: PsdUridine_synth_TruA_a/b_dom
description: Pseudouridine synthase I, TruA, alpha/beta domain

phrase: VSYDGTHFKGYQVQPGQRTVQTEIESALAKMHKQDELVPIVASGRTDSGVHAKGQVIHFDTPLSIPMERWPFALNSLLPDDIRVLKAEEVDESFHAR
type: DOMAIN
name: PsdUridine_synth_TruA_a/b_dom
description: Pseudouridine synthase I, TruA, alpha/beta domain
Protein sequence:
MLGLTQHAQKVWRMKPFSPEVSPGSSPATAGHLLRISTLFLTLLELAQVCRGSVVSNRPFITVWNGDTHWCLTEYGVDVDVSVFDVVANKEQSFQGSNMTIFYREELGTYPYYTPTGEPVFGGLPQNASLVTHLAHTFQDIKAAMPEPDFSGLAVIDWEAWRPRWAFNWDSKDIYRQRSMELVQAEHPDWPETLVEAAAKNQFQEAAEAWMAGTLQLGQVLRPRGLWGYYGFPDCYNNDFLSLNYTGQCPVFVRDQNDQLGWLWNQSYALYPSIYLPAALMGTEKSQMYVRHRVQEALRVAIVSRDPHVPVMPYVQIFYEMTDYLLPLEELEHSLGESAAQGVAGAVLWLSSDKTSTKESCQAIKAYMDSTLGPFIVNVTSAALLCSEALCSGHGRCVRHPSYPEALLTLNPASFSIELTHDGRPPSLKGTLSLKDRAQMAMKFRCRCYRGWRGKWCDKRGM

Annotated regions:
Protein sequence:
MKFFEIGEIVKSHGLKGRMKAKSYVENGEDLSSVHEAMIVKGKEEPRGYKVRKIVLHKTYFFLELETIDTVESADSLVGSTVLIPEDDRAALSGDEYYWRDLMGLQVVTEEGRFLGRIESIFPTGSNDVYVCAGGSREILLPAISDVILKIDLDKKEMVVRLLPGL

Annotated regions:
phrase: IGEIVKSHGLKGRMKAKSYVENGEDLSSVHEAMIVKGKEEPRGYKVRKIVLHKTYFFLELETIDTVESADSLVGSTVLIPED
type: DOMAIN
name: RimM_N
description: RimM, N-terminal

phrase: WRDLMGLQVVTEEGRFLGRIESIFPTGSNDVYVCAGGSREILLPAISDVILKIDLDKKEMVVR
type: DOMAIN
name: PRC_RimM
description: Ribosome maturation factor RimM, PRC barrel domain
Protein sequence:
MSSHPIQVFSEIGKLKKVMLHRPGKELENLLPDYLERLLFDDIPFLEDAQKEHDAFAQALRDEGIEVLYLEQLAAESLTSPEIRDQFIEEYLDEANIRDRQTKVAIRELLHGIKDNQELVEKTMAGIQKVELPEIPDEAKDLTDLVESDYPFAIDPMPNLYFTRDPFATIGNAVSLNHMFADTRNRETLYGKYIFKYHPIYGGKVDLVYNREEDTRIEGGDELVLSKDVLAVGISQRTDAASIEKLLVNIFKKNVGFKKVLAFEFANNRKFMHLDTVFTMVDYDKFTIHPEIEGDLHVYSVTYENEKLKIVEEKGDLAELLAQNLGVEKVHLIRCGGGNIVAAAREQWNDGSNTLTIAPGVVVVYDRNTVTNKILEEYGLRLIKIRGSELVRGRGGPRCMSMPFEREEV

Annotated regions:
Protein sequence:
MNLPIEQYADLLAEKAKNLTALLAPFNPPELEVFESETGHFRMRAEFRVWHDTNEVGENELYHIMFDQETKQRYCVEQFPIANHLINKMMSSLLAEIKGNELLTRKLFQVDYLSTLSGEIAVSMLYHKKLNEEWQAEAAALKARLEHQGFKVQIIGRATKQKIALDRDYVEEVLPVDGRNLIYRQVENSFTQPNAKMNIKMLEWARSCTRHSSGDLLELYCGNGNFSIALAENFRKVLATEISKSSVQSAQYNIEQNGIDNLQIIRMSAEEFTQAMNGVREFNRLKGIDLKAYDCNTIFVDPPRAGLDQDTLNMVQAYERILYISCNPYTLAENLRQLSLTHRIERAALFDQFPYTHHVESGVWLIRK

Annotated regions:
phrase: FDQFPYTHHV
type: CONSERVED_SITE
name: MeTrfase_TrmA_CS
description: RNA methyltransferase TrmA, conserved site

phrase: DPPRAGLDQDTLNMVQAYERILYISCNPY
type: ACTIVE_SITE
name: MeTrfase_TrmA_AS
description: RNA methyltransferase TrmA, active site
Protein sequence:
MGLSDGEWQLVLNVWGKVEADVAGHGQEVLIRLFKGHPETLEKFDKFKHLKTEDEMKASEDLKKHGNTVLSALGGILKKKGQHEAEIKPLAQSHATKHKIPVKYLEFISEAIIQVLQSKHPGDFGADAQAAMSKALELFRNDIAAKYKELGFQG

Annotated regions:
phrase: LSDGEWQLVLNVWGKVEADVAGHGQEVLIRLFKGHPETLEKFDKFKHLKTEDEMKASEDLKKHGNTVLSALGGILKKKGQHEAEIKPLAQSHATKHKIPVKYLEFISEAIIQVLQSKHPGDFGADAQAAMSKALELFRNDIAAKY
type: DOMAIN
name: Globin
description: Globin

phrase: EVLIRLFKGHPETLEKFDKFKHLKTEDEMKASEDLKKHGNTVLSALGGILKKKGQHEAEIKPLAQSHATKHKIPVKYLEFISEAIIQVLQSKHPGDFGADAQAAMSKALELFR
type: DOMAIN
name: Globin
description: Globin
Protein sequence:
MQRLVEIERFDSEESVEVTLRPSAWNEYIGQEQIKKNLGVFIEASKKRAEALDHVLFYGPPGLGKTTLALIIANEMNANIKVTAAPMIEKSGDLAAILTNLEEGDVLFIDEIHRLSPAVEEILYSSMEDFRIDIIIGSGPAAQTLKIDLPRFTLIGATTRAGMLSNPLRDRFGMNFRMQFYSPEELSKIISQASNKLNKKIADEACSEIAKRSRGTPRIALRLLRRVRDFADVANEKDILHSRAQYALDELGINSYGFDEMDIKLLNLLVGANGRAMGLSTIAAALSEDEGTVEDVLEPYLIANGYLERTAKGRKATPSTYKILNVTMPALDDGGLF

Annotated regions:
phrase: SYGFDEMDIKLLNLLVGANGRAMGLSTIAAALSEDEGTVEDVLEPYLIANGYLERTAKGRKATPSTYKI
type: DOMAIN
name: RuvB_C
description: RuvB C-terminal winged helix domain

phrase: ALDHVLFYGPPGLGKTTLALIIANEMNANIKVTAAPMIEKSGDLAAILTNLEEGDVLFIDEIHRLSPAVEEILYSSMEDFRIDIIIGSGPAAQTLKIDLPRFTLIGATTRAGMLSNPLRDRFGMNFRMQFYSP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: YSPEELSKIISQASNKLNKKIADEACSEIAKRSRGTPRIALRLLRRVRDFADVANEKDILHSRAQYALDELG
type: DOMAIN
name: AAA_lid_4
description: RuvB, AAA lid domain

phrase: LRPSAWNEYIGQEQIKKNLGVFIEASKKRAEALDHVLFYGPPGLGKTTLALIIANEMNANIKVTAAPMIEKSGDLAAILTNLEEGDVLFIDEIHRLSPAVEEILYSSMEDFRIDIIIGSGPAAQTLKIDLPRFTLIGATTRAGMLSNPLRDRFGMNFR
type: DOMAIN
name: RuvB-like_N
description: RuvB-like P-loop domain
Protein sequence:
MYDYIKGTLVKITAKHIVIETNGLGYIVTVANPYSFSDQMNQTIQVYLHQVIRDDAHLLFGFHTEDEKEVFLKLISVSGIGPTTALAIVAVDDNQGLVAAIDNSDIKYLMKFPKIGKKTAQQMVLDLAGKFAELPAETTNTTANQTAGNQQLDEAMEALLALGYKATELKKVKAFFEDTNETAEQYIKSALKMLMK

Annotated regions:
phrase: QLDEAMEALLALGYKATELKKVKAFFEDTNETAEQYIKSALKML
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal

phrase: LKLISVSGIGPTTALAIVA
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: KYLMKFPKIGKKTAQQMVL
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: MYDYIKGTLVKITAKHIVIETNGLGYIVTVANPYSFSDQMNQTIQVYLHQVIRDDAHLLF
type: DOMAIN
name: DNA_helicase_Holl-junc_RuvA_I
description: DNA helicase, Holliday junction RuvA type, domain I, bacterial

phrase: LDEAMEALLALGYKATELKKVKAFFEDTNETAEQYIKSAL
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal
Protein sequence:
MSSTGPGRRVCRQARIGHVLMGGTAPVVVQSMTNTDTADAAATALQVFDLWQAGSEVVRITVNSPEAAARVAEIRLRLDDMGCTAPLVGDFHFNGDRLLRDYPDCARALAKYRINPGNVGKGAKGDDKFAFMIRQAIEYDKAVRIGVNWGSLDQTLANRLMDENARRPHPLPAEAIMREALIISALDNAEKAVGLGLSPDQVILSCKVSHVQDLIAVYRELARRCDYALHLGLTEAGMGSKGIVASTAALSVLLQEGIGDTIRVSLTPEPGESRTKEVVVAQEILQTMGIRSFTPLVTACPGCGRTTSTFFQELAQRIQGYLREQMPLWRAEYPGVEMLNVAVMGCVVNGPGESKLADVGISLPGTGEVPVAPVYVDGEKTVTLKGERIAEEFQAIVDAYVRKNYGEGGAKRRRVIAVRPA

Annotated regions:
Protein sequence:
MILVIDVGNTNCTVGVYKEQKLLRHWRMTTDRHRTSDELGMTVLNFFSYANLTPSDIQGIIISSVVPPIMHAMETMCVRYFNIRPLIVGPGIKTGLNLKVDNPREIGSDRIVNAVAASEEYGTPVIVVDFGTATTFCYIDEAGVYQGGAIAPGIMISTEALYNRAAKLPRVDIAESSQIIGKSTVASMQAGIFYGFIGQCEGIIAEMKKQSNTSPVVVATGGLARMITEKSSAVDILDPFLTLKGLELLYRRNKPTTEK

Annotated regions:
Protein sequence:
MHFLDDNIQIKIDKFYKKNSLNKNRVIVAFSGGADSTTLLLNLKYYLSNNIIAFYFAHFIRPDNEQNKEIEHVKGFCDLYNIALQIKKCDIDIKSESVRLGVSIEELARKCRYNALENALKENDANYIALAHNENDQIETIIMRFFQGSFLDGLAGIPSVNKNIIRPLLEVSRPEIENFLSLNNIRVFIDSTNSQNLYLRNKVRNNLLPSIEKIFKGYEKCLKRISEFSKEFVNYFEKDEFFPVEKGKYYYSFDLKAFLDFPKYLVFRLIFKILNSEGIVAKISYKALNELFKIEIDRKKNNVLLKTNDFFLEKRHNKINLIFKRDEKFYKPFDFILEVGKWHSLSLGKILLKCLECNAASVSRLKCCSYEFRYKFFKDKLKAKKFFSKFIRCNPIYLMLLALDNRLIGIIDLNTLNLVWSEKSILKKISISLIGGLLKE

Annotated regions:
phrase: RVIVAFSGGADSTTLLLNLKYYLSNNIIAFYFAHFIRPDNEQNKEIEHVKGFCDLYNIALQIKKCDIDIKSESVRLGVSIEELARKCRYNALENALKENDANYIALAHNENDQIETIIMRFFQGSFLDGLAGIPSVNKNIIRPLLEVSRPEIENFLSLNNIRVFIDSTNSQNLYLRNKVRNNLL
type: DOMAIN
name: tRNA_Ile_lys_synt_N
description: tRNA(Ile)-lysidine synthase, N-terminal

phrase: RVIVAFSGGADSTTLLLNLKYYLSNNIIAFYFAHFIRPDNEQNKEIEHVKGFCDLYNIALQIKKCDIDIKSESVRLGVSIEELARKCRYNALENALKENDANYIALAHNENDQIETIIMRFFQGSFLDGLAGIPSVNKNIIRPLLEVSRPEIENFLSLNNIRVFIDSTNSQNLYLRNKVRNNLL
type: DOMAIN
name: tRNA_Ile_lys_synt_N
description: tRNA(Ile)-lysidine synthase, N-terminal

phrase: VIVAFSGGADSTTLLLNLKYYLSNNIIAFYFAHFIRPDNEQNKEIEHVKGFCDLYNIALQIKKCDIDIKSESVRLGVSIEELARKCRYNALENALKENDANYIALAHNENDQIETIIMRFFQGSFLDGLAGIPSVNKNIIRPLLEVSRPEIENFLSLNNIRVFIDSTNSQNLYLRNKVRN
type: DOMAIN
name: TilS/TtcA_N
description: tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal
Protein sequence:
MLYKGDTLYLDWLEDGIAELVFDAPGSVNKLDTATVASLGEAIGVLEQQSDLKGLLLRSNKAAFIVGADITEFLSLFLVPEEQLSQWLHFANSVFNRLEDLPVPTIAAVNGYALGGGCECVLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRMLGADSALEIIAAGKDVGADQALKIGLVDGVVKAEKLVEGAMAILRQAINGDLDWKAKRQPKLEPLKLSKIEATMSFTIAKGMVAQTAGKHYPAPITAVKTIEAAARFGREEALNLENKSFVPLAHTNEARALVGIFLNDQYVKGKAKKLTKDVETPKQAAVLGAGIMGGGIAYQSAWKGVPVVMKDINDKSLTLGMTEAAKLLNKQLERGKIDGLKLAGVISTIHPTLDYAGFDRVDIVVEAVVENPKVKKAVLAETEQKVRPDTVLASNTSTIPISELANALERPENFCGMHFFNPVHRMPLVEIIRGEKSSDETIAKVVAWASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDALFDANRFGQKNGLGFWRYKEDSKGKPKKEEDAAVDDLLAEVSQPKRDFSEEEIIARMMIPMVNEVVRCLEEGIIATPAEADMALVYGLGFPPFHGGAFRWLDTLGSAKYLDMAQQYQHLGPLYEVPEGLRNKARHNEPYYPPVEPARPVGDLKTA

Annotated regions:
phrase: GFFVNRVLFPYFAGFSQLLRDGADFRKIDKVMEKQFGWPMGPAYLLDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDALFDANRFGQKNGLGFWR
type: DOMAIN
name: 3HC_DH_C
description: 3-hydroxyacyl-CoA dehydrogenase, C-terminal

phrase: IIARMMIPMVNEVVRCLEEGIIATPAEADMALVYGLGFPPFHGGAFRWLDTLGSAKYLDMAQQY
type: DOMAIN
name: 3HC_DH_C
description: 3-hydroxyacyl-CoA dehydrogenase, C-terminal

phrase: DCPGFFVNRVLFPYFAGFSQLLRD
type: CONSERVED_SITE
name: 3-OHacyl-CoA_DH_CS
description: 3-hydroxyacyl-CoA dehydrogenase, conserved site

phrase: IAAVNGYALGGGCECVLATD
type: CONSERVED_SITE
name: Enoyl-CoA_hyd/isom_CS
description: Enoyl-CoA hydratase/isomerase, conserved site

phrase: AAVLGAGIMGGGIAYQSAWKGVPVVMKDINDKSLTLGMTEAAKLLNKQLERGKIDGLKLAGVISTIHPTLDYAGFDRVDIVVEAVVENPKVKKAVLAETEQKVRPDTVLASNTSTIPISELANALERPENFCGMHFFNPVHRMPLVEIIRGEKSSDETIAKVVAWASKMGKTPIVVND
type: DOMAIN
name: 3-OHacyl-CoA_DH_NAD-bd
description: 3-hydroxyacyl-CoA dehydrogenase, NAD binding
Protein sequence:
MATTSQLPAYKQDFLKSAIDGGVLKFGSFELKSKRISPYFFNAGEFHTARLARRIASAFAKTIIEAQEKAGLEFDIVFGPAYKGIPLCSAITIKLGDVAPQNLDRVSYSFDRKEAKDHGEGGNIVGASLKGKRVLIVDDVITAGTAKRDAIEKITKEGRHRRGIVVALDRMEKLPAADGDDSKPGPSAIGELRKEYGIPIFAILTLDDIIDGMKGFATPEDIKNTEDYRAKYKATD

Annotated regions:
phrase: IASAFAKTIIEAQEKAGLEFDIVFGPAYKGIPLCSAITIKLGDVAPQNLDRVSYSFDRKEAKDHGEGGNIVGASLKGKRVLIVDDVITAGTAKRDAIEKITKEGRHRRGIVVALDRMEKLPAADG
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: AKTIIEAQEKAGLEFDIVFGPAYKGIPLCSAITIKLGDVAPQNLDRVSYSFDRKEAKDHGEGGNIVGASLKGKRVLIVDDVITAGTAKRDAIEKITKEGRHRRGIVVALDRMEKLPAADGDDSKPGPSAIGELRKEYGIPIFAIL
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: AIDGGVLKFGSFELKSKRISPYFFNAGEFHTARLARRIASAFAKTIIEAQEKAGLEFDIVFGPAYKGIPLCSAITIKLGDVAPQNLDRVSYSFDRKEAKDHGEGGNIVGASLKGKRVLIVDDVITAGTAKRDAIEKITKEGRHRRGIVVALDRMEKLPAADGDDSKPGPSAIGELRKEYGIPIFAILTLDD
type: DOMAIN
name: Or_phspho_trans_dom
description: Orotate phosphoribosyl transferase domain
Protein sequence:
MTPPGRLYLLRVCSTPPLLLLGLLLALPLEAQGLRGIGLTPSAAQPAHQQLPTPFTRGTLKPAAHLVGDPSTQDSLRWRANTDRAFLRHGFSLSNNSLLVPTSGLYFVYSQVVFSGRGCFPRATPTPLYLAHEVQLFSPQYPFHVPLLSAQKSVCPGPQGPWVRSVYQGAVFLLTRGDQLSTHTDGISHLLLSPSSVFFGAFAL

Annotated regions:
phrase: AAHLVGDPSTQDSLRWRANTDRAFLRHGFSLSNNSLLVPTSGLYFVYSQVVFSGRGCFPRATPTPLYLAHEVQLFSPQYPFHVPLLSAQKSVCPGPQGPWVRSVYQGAVFLLTRGDQLSTHTDGISHLLLSPSSVFFGAFA
type: DOMAIN
name: TNF_dom
description: Tumour necrosis factor domain

phrase: PAAHLVGDPSTQDSLRWRANTDRAFLRHGFSLSNNSLLVPTSGLYFVYSQVVFSGRGCFPRATPTPLYLAHEVQLFSPQYPFHVPLLSAQKSVCPGPQGPWVRSVYQGAVFLLTRGDQLSTHTDGISHLLLSPSSVFFGA
type: DOMAIN
name: TNF_dom
description: Tumour necrosis factor domain

phrase: LRWRANTDRAFLRHGFSLSNNSLLVPTSGLYFVYSQVVFSGRGCFPRATPTPLYLAHEVQLFSPQYPFHVPLLSAQKSVCPGPQGPWVRSVYQGAVFLLTRGDQLSTHTDGISHLLLSPSSVFFGAFA
type: DOMAIN
name: TNF_dom
description: Tumour necrosis factor domain

phrase: PAAHLVGDPSTQDSLRWRANTDRAFLRHGFSLSNNSLLVPTSGLYFVYSQVVFSGRGCFPRATPTPLYLAHEVQLFSPQYPFHVPLLSAQKSVCPGPQGPWVRSVYQGAVFLLTRGDQLSTHTDGISHLLLSPSSVFFGAFA
type: DOMAIN
name: TNF_dom
description: Tumour necrosis factor domain

phrase: LLVPTSGLYFVYSQVV
type: CONSERVED_SITE
name: TNF_CS
description: Tumour necrosis factor, conserved site