nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MGSLRPPQGLGLQWSSFFLGKKGPGLTVSLPLLASSLQVNFRSPRSGQRCWAARTSVEKRLVVLVTLLAAGLVACLAALGIQYRTRTPPVCLTEACVSVTSSILNSMDPTVDPCQDFFSYACGGWIKANPVPDGHSRWGTFSNLWEHNQAIIKHLLENSTASASEAEKKAQVYYRACMNETRIEELRAKPLMELIEKLGGWNITGPWAKDNFQDTLQVVTAHYRTSPFFSVYVSADSKNSNSNVIQVDQSGLGLPSRDYYLNKTENEKVLTGYLNYMVQLGKLLGGGDEDSIRPQMQQILDFETALANITIPQEKRRDEELIYHKVTAAELQTLAPAINWLPFLNAIFYPVEINESEPIVVYDKEYLRQVSTLINSTDKCLLNNYMMWNLVRKTSSFLDQRFQDADEKFMEVMYGTKKTCLPRWKFCVSDTENNLGFALGPMFVKATFAEDSKNIASEIILEIKKAFEESLSTLKWMDEDTRRSAKEKADAIYNMIGYPNFIMDPKELDKVFNDYTAVPDLYFENAMRFFNFSLRVTADQLRKAPNRDQWSMTPPMVNAYYSPTKNEIVFPAGILQAPFYTRSSPNALNFGGIGVVVGHELTHAFDDQGREYDKDGNLRPWWKNSSVEAFKQQTECMVQQYNNYSVNGEPVNGRHTLGENIADNGGLKAAYRAYQNWVKKNGAEQILPTLGLTSNQLFFLGFAQVWCSVRTPESSHEGLITDPHSPSRFRVIGSLSNSKEFSEHFRCPLGSPMNPRHKCEVW

Annotated regions:
phrase: NAYYSPTKNEIVFPAGILQAPFYTRSSPNALNFGGIGVVVGHELTHAFDDQGREYDKDGNLRPWWKNSSVEAFKQQTECMVQQYNNYSVNGEPVNGRHTLGENIADNGGLKAAYRAYQNWVKKNGAEQILPTLGLTSNQLFFLGFAQVWCSVRTPESSHEGLITDPHSPSRFRVIGSLSNSKEFSEHFRCPLGSPMNPRHKCE
type: DOMAIN
name: Peptidase_M13_C
description: Peptidase M13, C-terminal domain

phrase: PCQDFFSYACGGWIKANPVPDGHSRWGTFSNLWEHNQAIIKHLLENSTASASEAEKKAQVYYRACMNETRIEELRAKPLMELIEKLGGWNITGPWAKDNFQDTLQVVTAHYRTSPFFSVYVSADSKNSNSNVIQVDQSGLGLPSRDYYLNKTENEKVLTGYLNYMVQLGKLLGGGDEDSIRPQMQQILDFETALANITIPQEKRRDEELIYHKVTAAELQTLAPAINWLPFLNAIFYPVEINESEPIVVYDKEYLRQVSTLINSTDKCLLNNYMMWNLVRKTSSFLDQRFQDADEKFMEVMYGTKKTCLPRWKFCVSDTENNLGFALGPMFVKATFAEDSKNIASEIILEIKKAFEESLSTLKWMDEDTRRSAKEKADAIYNMIGY
type: DOMAIN
name: Peptidase_M13_N
description: Peptidase M13, N-terminal domain

phrase: WSMTPPMVNAYY
type: DOMAIN
name: Peptidase_M13_C
description: Peptidase M13, C-terminal domain

phrase: IVFPAGILQAPF
type: DOMAIN
name: Peptidase_M13_C
description: Peptidase M13, C-terminal domain

phrase: NFGGIGVVVGHELTHA
type: DOMAIN
name: Peptidase_M13_C
description: Peptidase M13, C-terminal domain

phrase: ENIADNGGLKA
type: DOMAIN
name: Peptidase_M13_C
description: Peptidase M13, C-terminal domain
Protein sequence:
MGLSTLEQKLTAMISAPVEALGFELVGLEFIRARVSTLRIYIDSENGITVDDCADVSHQVSAVLDVEDPISVLYNLEISSPGLERPLFTTEHYQRFIGEEVSLVLRIAMQNRRKWLGIIKTVDGEMITVTVDGKDEVFALSNIQKANLVPHF

Annotated regions:
phrase: GLERPLFTTEHYQRFIGEEVSLVLRIAMQNRRKWLGIIKTVDGEMITVTVDGKDEVFALSNIQKANLVPH
type: DOMAIN
name: RimP_C
description: Ribosome maturation factor RimP, C-terminal

phrase: LFTTEHYQRFIGEEVSLVLRIAMQNRRKWLGIIKTVDGEMITVTVDGKDEVFALSNIQKANLVPH
type: DOMAIN
name: RimP_C
description: Ribosome maturation factor RimP, C-terminal

phrase: MISAPVEALGFELVGLEFIRARVSTLRIYIDSENGITVDDCADVSHQVSAVLDVEDPISVLYNLEISSPGL
type: DOMAIN
name: RimP_N
description: Ribosome maturation factor RimP, N-terminal
Protein sequence:
MVKVIYKFAVFAAVNFFLMSSIVLYFNNEFLMFADRCTKDIIPSEELRYLRQVLNDSIPSKDEPLPTLKLDSLNDISGEPVIPKIIHQTWKTTEVPEGWKGAQQSCIDLHPDYEYILWTDEMSRNFIADNYPWFLPYFDAYPFNVQRADVIRYFVLYHYGGNYIDLDDGCRQRLDSLLYYPVWVRRTDPVGVSNDVMGSVPHHPYFELIIQNLEKNAKSYWLPYLTIMLSTGPLSISFLWEKYKRQLPNPPAFYDHIRVLLERDYKFSNDSYFTFYEGSSWHNNDAGIILWANRHLAYVIVAGFCLYFILSYMFFSKLLDSRYVQRFVTSKRKQPTLPLALQEDV

Annotated regions:
phrase: PEGWKGAQQSCIDLHPDYEYILWTDEMSRNFIADNYPWFLPYFDAYPFNVQRADVIRYFVLYHYGGNYIDLDDGCRQRLDSL
type: CONSERVED_SITE
name: GlycoTrfase_DXD_sugar-bd_CS
description: Glycosyltransferase, DXD sugar-binding motif
Protein sequence:
MNTETTQDTTEAKLPGERLREARERLGLTQQTIAERLCLKITTVRDIEDGTTPADLAPTFLRGYIRSYAKLVHLPEDNLLPIMDKQAVPKAISVSPMQSFSLKKSRKKRDGWLMIITWLVVLVVLGLTGAWWWQNHQAQQAEINSMVDHASSMQSQTEGQSVPLMDNSAPQETSTAGSAATPPSTPVDLSATIAATPSTPPSSTTASSAAPSSQSPSQANATQSQAAGNALLGAGAVAPAATVADSNPVSAAHALVMTFTADCWLEVTDVSGKKLFSGMQRNGSTLNLDGQSPYQLKIGAPAAVQIKFQGKPVDLSRFVRSSQVARLTLTAE

Annotated regions:
phrase: GERLREARERLGLTQQTIAERLCLKITTVRDIEDGTTPADLAPTFLRGYIRSYAKLVHLPEDN
type: DOMAIN
name: Cro/C1-type_HTH
description: Cro/C1-type helix-turn-helix domain

phrase: VMTFTADCWLEVTDVSGKKLFSGMQRNGSTLNLDGQSPYQLKIGAPAAVQIKFQGKPVDLSRFVRSSQVARL
type: DOMAIN
name: RodZ-like_C
description: Cytoskeleton protein RodZ-like, C-terminal domain

phrase: RLREARERLGLTQQTIAERLCLKITTVRDIEDGTTPADLAPTFLRGYIRSYAKLVH
type: DOMAIN
name: Cro/C1-type_HTH
description: Cro/C1-type helix-turn-helix domain

phrase: LREARERLGLTQQTIAERLCLKITTVRDIEDGT
type: DOMAIN
name: Cro/C1-type_HTH
description: Cro/C1-type helix-turn-helix domain
Protein sequence:
MAKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKTVETDGYEAIQVGFEDKRVKLSNKPQQGHVAKANTAPKRFIREFRNVNVEEYEVGQEVKVEIFAEGDVIDVTGVTKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKQKKLPGQMGGNVVTIQNLEIVKVDTDRNLLLVKGNVPGSKKALVTVKTASKAK

Annotated regions:
phrase: FAEGDVIDVTGVTKGKGFQGVIK
type: CONSERVED_SITE
name: Ribosomal_uL3_CS
description: Large ribosomal subunit protein uL3, conserved site
Protein sequence:
MAAREESTQSANRVLRISQLDALELNKALEQLVWSQFTQCFHGFKPGLLARFEPEVKAFLWLFLWRFTIYSKNATVGQSVLNIQHKNDSSPNPVYQPPSKNQKLLYAVCTIGGRWLEERCYDLFRNRHLASFGKAKQCMNFVVGLLKLGELMNFLIFLQKGKFATLTERLLGIHSVFCKPQNMREVGFEYMNRELLWHGFAEFLIFLLPLINIQKLKAKLSSWCTLCTGAAGHDSTLGSSGKECALCGEWPTMPHTIGCEHVFCYYCVKSSFLFDIYFTCPKCGTEVHSVQPLKAGIQMSEVNAL

Annotated regions:
phrase: CEHVFCYYC
type: CONSERVED_SITE
name: Znf_RING_CS
description: Zinc finger, RING-type, conserved site

phrase: CALCGEWPTMPHTIGCEHVFCYYCVKSSFLFDIYFTCPK
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: CALCGEWPTMPHTIGCEHVFCYYCVKSSFLFDIYFTCPK
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: KECALCGEWPTMPHTIGCEHVFCYYCVKSSFLFDIYFTCPKCGTEV
type: DOMAIN
name: RING-HC_PEX2
description: Peroxisome biogenesis factor 2, HC subclass-RING finger domain

phrase: KALEQLVWSQFTQCFHGFKPGLLARFEPEVKAFLWLFLWRFTIYSKNATVGQSVLNIQHKNDSSPNPVYQPPSKNQKLLYAVCTIGGRWLEERCYDLFRNRHLASFGKAKQCMNFVVGLLKLGELMNFLIFLQKGKFATLTERLLGIHSVFCKPQNMREVGFEYMNRELLWHGFAEFLIFLLPLINIQKLKAKLSSWC
type: DOMAIN
name: Pex_N
description: Pex, N-terminal
Protein sequence:
MTKIDLLSLRIDEIEDLLEKMGEKKFRGKQIFQWVNKGIKQFDDMTNIGKTLRENLQQNTFITHIKVEKKMVSKIDGTTKYLFILEDKNVIEAVVMKYKHGLTACISSQVGCTMGCSFCASTIGGLVRNLRAGEMMDQILQMQQDLGERISNIVLMGSGEPLHNYKEVIKFLEIVNSEEGLNIGNRHITLSTCGLVPEIRDLADLEIPINLAISLHAPNDEIRQKMMPIAKKYTIKDLMGACKYYLQKTNRRLTFEYALVKEVNDEEVHAKQLGQLLKGLLCYVNLIPVNIVTKGKFQKPREDQVKRFQKVLKMQGVEATIRREMGADINAACGQLRNNYLSKEMEK

Annotated regions:
phrase: IDLLSLRIDEIEDLLEKMGEKKFRGKQIFQWVNKGIKQFDDMTNIGKTLRENLQQNTF
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: SSQVGCTMGCSFCASTIGGLVRNLRAGEMMDQILQMQQDLGERISNIVLMGSGEPLHNYKEVIKFLEIVNSEEGLNIGNRHITLSTCGLVPEIRDLADLEIPINLAISLHAPNDEIRQKMMPIAKKYTIKDLMGACKYYLQKTNRRLTFEYALVKEVNDEEV
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TKIDLLSLRIDEIEDLLEKMGEKKFRGKQIFQWVNKGIKQFDDMTNIGKTLRENLQQNTFITHIKVEKKMVSKIDGTTKYLFILEDKNVIEAVVMKYKHGLTACISSQVGCTMGCSFCASTIGGLVRNLRAGEMMDQILQMQQDLGERISNIVLMGSGEPLHNYKEVIKFLEIVNSEEGLNIGNRHITLSTCGLVPEIRDLADLEIPINLAISLHAPNDEIRQKMMPIAKKYTIKDLMGACKYYLQKTNRRLTFEYALVKEVNDEEVHAKQLGQLLKGLLCYVNLIPVNIVTKGKFQKPREDQVKRFQKVLKMQGVEATIRREMGADINAACGQLRNNYLSK
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: YKHGLTACISSQVGCTMGCSFCASTIGGLVRNLRAGEMMDQILQMQQDLGERISNIVLMGSGEPLHNYKEVIKFLEIVNSEEGLNIGNRHITLSTCGLVPEIRDLADLEIPINLAISLHAPNDEIRQKMMPIAKKYTIKDLMGACKYYLQKTNRRLTFEYALVKEVNDEEVHAKQLGQLLKGLLCYVNLIPVNIVTKGKFQKPREDQVKRFQKVLKMQGVEATIRREMGA
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MVSPVTVVKSEGPKLVPFFKATCVYFVLWLPSSSPSWVSALIKCLPIFCLWLFLLAHGVRFLLAHPSASLIFVGLVFSAVGDAFLIWQDHGYFEHGLLMFAVAHILYAAAFGMRPLALRTGLVIGVLSGLCYALLYPGLSGAFTYLVGVYVALISFMGWRAMAGLRLVGAAWRWTELAAGGGALLFILSDLTIALNKFCFPVPYSRALIMSTYYAAQMLIALSAVESREPVGEDYRLSKAD

Annotated regions:
Protein sequence:
MPRRTLAFLHLLSLSGTVGRIEDKEEPIKKRLKTHNIETPAVAKYYEKHNKLVKIDAKGAAEEVFAAAVKQLDDVMTKLPQPRKVLNMAPLKKAKLPILFIVGGPGSGKGTQCERIVAKYGFSHLSSGDLLREEVKSGSPRGAQLSKIMEAGELVPQEIVLDLLKEAMLKEVAKGSKGFLIDGYPREVKQGELFEKEIQQAKSVIFFDVSDDILVERLLNRAKTRQSQVSHYEKQKKLARIKAHGTIDEIFAELVQHIDSIVKKKARATTYARAMIDLAPLKRANVPIFFIIGGPGSGKGTQCEKIAEKYSLSHLSSGDLLREEVKSRSPRGGFISKFMEAGDIVPFEIVLDLIKEVMLKKVARGSKGFLIDGYPMDVEEGEQFEKEVQEVKSVIFFDASDEVLTERLLQHAKTSGRADDNKDTIEKRLKTFSITKTPIIEHYEKKKKLVRIKADGNVEEIFAEVVKHLDGCIGNKSSNRTAKFIPLFPSLFIFRLRKTVRYRGTSVDQTKGIDLTPLKKAAVPIFFIVGRPGSGKGTQCEKIVEKYGLSHLSSGHLLRDDAKSGSPRGAIVAKIMKAGELVQTDIVLDLLKEAMLKEVAKGSKGFVIDGYPLEVRQGERFENEIQQPQSVIFFDASDDILLKRLLKRAKTSGRVDDNLETIRVRLQNSTTATALVVDYYKKKNKLVRIQAEGTVDEIFAAVEKHLDSQMKKKPEGLTVERKAIDLAPLKNAGVPIFFIVGGPGSGKGTQCEKIVAKYGLSHLSSGDL

Annotated regions:
phrase: FLIDGYPREVK
type: CONSERVED_SITE
name: Adenylat_kinase_CS
description: Adenylate kinase, conserved site

phrase: KLPILFIVGGPGSGKGTQCERIVAKYGFSHLSSGDLLREEVKSGSPRGAQLSKIMEAGELVPQEIVLDLLKEAMLKEVAKGSKGFLIDGYPREVKQGELFEKEIQQAKSVIFFDVSDDILVERLLNRAKTRQSQVSHY
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: NVPIFFIIGGPGSGKGTQCEKIAEKYSLSHLSSGDLLREEVKSRSPRGGFISKFMEAGDIVPFEIVLDLIKEVMLKKVARGSKGFLIDGYPMDVEEGEQFEKEVQEVKSVIFFDASDEVLTERLLQHAKTSGRADDNKDTIEKRLKTFSITKTPIIEHYEKKKKLVRIKADGNVEEIFAEVVKHLDG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: AVPIFFIVGRPGSGKGTQCEKIVEKYGLSHLSSGHLLRDDAKSGSPRGAIVAKIMKAGELVQTDIVLDLLKEAMLKEVAKGSKGFVIDGYPLEVRQGERFENEIQQPQSVIFFDASDDILLKRLLKRAKTSGRVDDNLE
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain
Protein sequence:
MNPTDIADTTLDESIYSNYYLYESIPKPCTKEGIKAFGELFLPPLYSLVFVFGLLGNSVVVLVLFKYKRLRSMTDVYLLNLAISDLLFVFSLPFWGYYAADQWVFGLGLCKMISWMYLVGFYSGIFFVMLMSIDRYLAIVHAVFSLRARTLTYGVITSLATWSVAVFASLPGFLFSTCYTERNHTYCKTKYSLNSTTWKVLSSLEINILGLVIPLGIMLFCYSMIIRTLQHCKNEKKNKAVKMIFAVVVLFLGFWTPYNIVLFLETLVELEVLQDCTFERYLDYAIQATETLAFVHCCLNPIIYFFLGEKFRKYILQLFKTCRGLFVLCQYCGLLQIYSADTPSSSYTQSTMDHDLHDAL

Annotated regions:
phrase: GNSVVVLVLFKYKRLRSMTDVYLLNLAISDLLFVFSLPFWGYYAADQWVFGLGLCKMISWMYLVGFYSGIFFVMLMSIDRYLAIVHAVFSLRARTLTYGVITSLATWSVAVFASLPGFLFSTCYTERNHTYCKTKYSLNSTTWKVLSSLEINILGLVIPLGIMLFCYSMIIRTLQHCKNEKKNKAVKMIFAVVVLFLGFWTPYNIVLFLETLVELEVLQDCTFERYLDYAIQATETLAFVHCCLNPII
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM
Protein sequence:
MIEIKKAKPTSPGRRHVVSVKNTELHTGKPFKGLVEVKKSKAGRNNTGRITVRHQGGGHKQHYRVVDFKRNKDDITAKVERIEYDPNRSANIALVLYADGERRYIVAPKGLKKDMSVISGEKVDVAVGNCMPLRNIPLGTVIHNIEMKPKKGAQMIRSAGTFAQLVGKDNAYAIIRLRSGEMRRVLLDCRAVIGVVSNSEHNLKSLGKAGAKRWRGIRPTVRGVAMNPVDHPHGGGEGRTSGGRHPVTPWGIPTKGYKTRRNKRSNKLIVQKRK

Annotated regions:
phrase: GRNNTGRITVRHQGGGHKQHYRVVDFKRNKDDITAKVERIEYDPNRSANIALVLYADGERRYIVAPKGLKKDMSV
type: DOMAIN
name: Ribosomal_uL2_RNA-bd_dom
description: Large ribosomal subunit protein uL2, RNA-binding domain

phrase: VGNCMPLRNIPLGTVIHNIEMKPKKGAQMIRSAGTFAQLVGKDNAYAIIRLRSGEMRRVLLDCRAVIGVVSNSEHNLKSLGKAGAKRWRGIRPTVRGVAMNPVDHPHGGGEGRTSGGRHPVTPW
type: DOMAIN
name: Ribosomal_uL2_C
description: Large ribosomal subunit protein uL2, C-terminal

phrase: VAVGNCMPLRNIPLGTVIHNIEMKPKKGAQMIRSAGTFAQLVGKDNAYAIIRLRSGEMRRVLLDCRAVIGVVSNSEHNLKSLGKAGAKRWRGIRPTVRGVAMNPVDHPHGGGEGRTSGGRHPVTPWGI
type: DOMAIN
name: Ribosomal_uL2_C
description: Large ribosomal subunit protein uL2, C-terminal

phrase: PTVRGVAMNPV
type: CONSERVED_SITE
name: Ribosomal_uL2_CS
description: Large ribosomal subunit protein uL2, conserved site
Protein sequence:
MSAVAENIQTEMPAPIVFTDSAAAKVADLIAEEGNPDLKLRVFVQGGGCSGFQYGFTFDEITNEDDTTMTKNGVSLLIDAMSYQYLVGAEIDYKEDLQGAQFVIKNPNATTTCGCGSSFSV

Annotated regions:
phrase: IVFTDSAAAKVADLIAEEGNPDLKLRVFVQGGGCSGFQYGFTFDEITNEDDTTMTKNGVSLLIDAMSYQYLVGAEIDYKEDLQGAQFVIKNPNATTTCGC
type: DOMAIN
name: FeS_biogenesis
description: FeS cluster biogenesis

phrase: FVIKNPNATTTCGCGSS
type: CONSERVED_SITE
name: FeS_cluster_insertion_CS
description: FeS cluster insertion, C-terminal, conserved site
Protein sequence:
MPPPFPTATAAASTTSHLALLLLLSSSSVFFLYKSLRLRRNNPPSPPPGQGPAPTPTLLYASATGTSKALAAGLSRRLAEAGVTAHPADAAAFDPDDLPSLPLLLLVLPTHDGGAPPPAAAFLARWLEESAADFRAGAALLSGLRFAVFGVGSRAYGETFNAAARSFSRWLRALGAAEVVAVGEGDVDGGDLEVVFEEWCGRVVRVVKGEEIGEGHNGESDGFDELEEEESDDDDDEEEVDGGEVDMEDIAGKAPAARRRNGKVEGALSNGGENGVRDMVTPIIRTSLEKQGYKIIGSHSGVKICRWTKSQLRGRGGCYKHSFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGKSWKWKMDDPLDIVNAAIDQHTKMVKQMKGVPGVKPERLAEGLSPRHCALSLVGEPIMYPEINVLIDELHRRHISTFLVTNAQFPDKIKTLKPITQLYVSVDAATKESLKAVDRPLFSDFWERFLDSLKSLHDKDQRTVYRLTLVKGWNAEEIDGYAKLLSLGQPDFIEIKGVTYCGSSATSKLTMENVPWHSDVKDFSEALALKSGGVYEVACEHAHSCCVLLAKVDKFKINGKWHTWIDYDRFHELVTSGKPFRSQDYMALTPSWAVYGAEEGGFDPDQSRYKKERRHGAAALKD

Annotated regions:
phrase: RDMVTPIIRTSLEKQGYKIIGSHSGVKICRWTKSQLRGRGGCYKHSFYGIESHRCMEATPSLACANKCVFCWRHHTNPVGKSWKWKMDDPLDIVNAAIDQHTKMVKQMKGVPGVKPERLAEGLSPRHCALSLVGEPIMYPEINVLIDELHRRHISTFLVTNAQFPDKIKTLKPITQLYVSVDAATKESLKAVDRPLFSDFWERFLDSLKSLHDKDQRTVYRLTLVKGWNAEEIDGYAKLLSLGQPDFIEIKGVTYCGSSATSKLTMENVPWHSDVKDFSEALALKSGGVYEVACEHAHSCCVLLAKVDK
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LLYASATGTSKALAAGLSRRLAEAGVTAHPADAAAFDPDDLPSLPLLLLVLPTHDGGAPPPAAAFLARWLEESAADFRAGAALLSGLRFAVFGVGSRAYGETFNAAARSFSRWLRALGAAEVVAVGEGDVDGGDLEVVFEE
type: DOMAIN
name: Flavodoxin/NO_synth
description: Flavodoxin/nitric oxide synthase

phrase: TLLYASATGTSKA
type: DOMAIN
name: Flavdoxin-like
description: Flavodoxin-like

phrase: LLVLPTHDGGA
type: DOMAIN
name: Flavdoxin-like
description: Flavodoxin-like

phrase: GLRFAVFGVG
type: DOMAIN
name: Flavdoxin-like
description: Flavodoxin-like

phrase: SRWLRALGAAEVVAVGEGD
type: DOMAIN
name: Flavdoxin-like
description: Flavodoxin-like

phrase: YGIESHRCMEATPSLACANKCVFCWRHHTNPVGKSWKWKMDDPLDIVNAAIDQHTKMVKQMKGVPGVKPERLAEGLSPRHCALSLVGEPIMYPEINVLIDELHRRHISTFLVTNAQFPDKIKTLKPITQLYVSVDAATKESLKAVDRPLFSDFWERFLDSLKSLHDKDQRTVYRLTLVKGWNAEEIDGYAKLLSLGQPDFIEIKGVTYCGSSATSKLTMENVPWHSDVKDFSEALALKSGGVY
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: PTLLYASATGTSKALAAGLSRRLAEAGVTAHPADAAAFDPDDLPSLPLLLLVLPTHDGGAPPPAAAFLARWLEESAADFRAGAALLSGLRFAVFGVGSRAYGETFNAAARSFSRWLRALGAAEVVAVGEGDVDGGDLEVVFEEWCGRV
type: DOMAIN
name: Flavodoxin/NO_synth
description: Flavodoxin/nitric oxide synthase

phrase: LACANKCVFCWRHHTNPVGKSWKWKMDDPLDIVNAAIDQHTKMVKQMKGVPGVKPERLAEGLSPRHCALSLVGEPIMYPEINVLIDELHRRHISTFLVTNAQFPDKIKTLKPITQLYVSVDAATKESLKAVDRPLFSDFWERFLDSLKSLHDKDQRTVYRLTLVKGWNAEEIDGYAKL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: GQPDFIEIKGVTYCGSSATSKLTMENVPWHSDVKDFSEALALKSGGVYEVACEHAHSCCVLLA
type: DOMAIN
name: tRNA_wybutosine-synth
description: tRNA wybutosine-synthesis
Protein sequence:
MHELIKYQFNTRRKKYGTGAALSLLNGNVGHEVLAFHKKLPNYAVTPLHNLAHLSQRLGLGSIHIKDESWRFGLNAFKGLGGSYAVGKYLADKLQCDINSLSFAALNTPEIKEKIKDCVFVTATDGNHGRGVAWAAEQLGLKAVVYMPKGSSLIRAENIRHHGAECTITDLNYDDAVRLAHRMAQTKGWVLLQDTAWTGYEEIPTWIMQGYMTLAVEAYEQLAETNSPLPTHLILQAGVGSFAGSVMGYFVEKMQENIPNIIVVEPHQANCLYQSAVMDDGQPHCVTGDMATIMAGLACGEPNIISWPIIRDNTSCFISADDCLAAKGMRISAAPRPGTDTPFISGESGAIGVGLLYELMNNMHYQDLANRLQLDASAHVLLISTEGDTSPDIYEDIVWNGRSA

Annotated regions:
phrase: NYAVTPLHNLAHLSQRLGLGSIHIKDESWRFGLNAFKGLGGSYAVGKYLADKLQCDINSLSFAALNTPEIKEKIKDCVFVTATDGNHGRGVAWAAEQLGLKAVVYMPKGSSLIRAENIRHHGAECTITDLNYDDAVRLAHRMAQTKGWVLLQDTAWTGYEEIPTWIMQGYMTLAVEAYEQLAETNSPLPTHLILQAGVGSFAGSVMGYFVEKMQENIPNIIVVEPHQANCLYQSAVMDDGQPHCVTGDMATIMAGLACGEPNIISWPIIRDNTSCFISADDCLAAKGMRIS
type: DOMAIN
name: TrpB-like_PALP
description: Tryptophan synthase beta chain-like, PALP domain
Protein sequence:
MAKILKFDEDARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVEVEDPYENLGAQLVKEVATKTNDIAGDGTTTATVLAQALVREGLKNVAAGASPALLKKGIDAAVAAVSEDLLATARPIDEKSDIAAVAALSAQDQQVGELIAEAMDKVGKDGVITVEESNTFGLELDFTEGMAFDKGYLSPYFVTDQERMEAVLDDPYILINQGKISSIADLLPLLEKVIQANASKPLLIIAEDLEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLQDMAVLTGATVISEEVGLKLDQVGLEVLGTARRITVTKDDTTIVDGAGKRDEVQGRIAQIKAEIENTDSDWDREKLQERLAKLAGGVCVIKVGAATEVELKERKHRLEDAISATRAAVEEGIVSGGGSALVHAVKVLEGNLGKTGDEATGVAVVRRAAVEPLRWIAENAGLEGYVITSKVADLDKGQGFNAATGEYGDLVKAGVIDPVKVTRSALENAASIASLLLTTETLVVEKKEEEEPAAGGHSHGHSH

Annotated regions:
phrase: AAVEEGIVSGG
type: CONSERVED_SITE
name: Chaperonin_Cpn60_CS
description: Chaperonin Cpn60, conserved site
Protein sequence:
MWNDMKLAIAFLSRVPVPLKQNKGNLKKICAYFTFVGYLAGVFYFSMKLISENFLWTLLSVALGFYLFDLFHFDGLLDTLDGFFYQGTKERRFEIMSKGDIGPFAFFYAALYIVAYLYAFLHVDPIDLIYVAVLGRFSMNILLHFGKPAKNTGLGKLLHPYEKKHTLISLVFTIPLVYFPLNYIISLSIALLLGSSMHFITNRKIEGYTGDVLGATCMFSQLSIMVALSLI

Annotated regions:
Protein sequence:
MAAYCSRVYHHHPVSPSTMQGSLARPSIHAGSASLTFRARPNSVSIVRCDADSPPEGSAVAGWAPPGPYTGRDPAARKPAWLRQRAAQGEKYARLRESLGELKLNTVCVEAQCPNIGECWNGGGGAGGDGDGIATATIMLLGDTCTRGCRFCAVKTSNKPPPPDALEPLRTAVAVASWGVDYVVLTSVDRDDLPDGGSGHFAQTVKALKELKPGILVECLTSDFRGDLEAVSSLASSGLDVFAHNIETVRSLQRIVRDPRAAYDQSLAVLKHAKNCKDGMVTKSSIMLGLGETDEEVKQTMCDLRAIDVDILTLGQYLQPTERHLRVREYVTPEKFDFWKEYGESLGFLYVASGPLVRSSYRAGELFVQNLVRRKKAELAPTLQ

Annotated regions:
phrase: AARKPAWLRQRAAQGEKYARLRESLGELKLNTVCVEAQ
type: DOMAIN
name: LIAS_N
description: Lipoyl synthase, N-terminal

phrase: TATIMLLGDTCTRGCRFCAVKTSNKPPPPDALEPLRTAVAVASWGVDYVVLTSVDRDDLPDGGSGHFAQTVKALKELKPGILVECLTSDFRGDLEAVSSLASSGLDVFAHNIETVRSLQRIVRDPRAAYDQSLAVLKHAKNCKDGMVTKSSIMLGLGETDEEVKQTMCDLRAIDVDILTLGQYLQPTERHLRVREYVTPEKFDFWKEYG
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: LGDTCTRGCRFCAVKTSNKPPPPDALEPLRTAVAVASWGVDYVVLTSVDRDDLPDGGSGHFAQTVKALKELKPGILVECLTSDFRGDLEAVSSLASSGLDVFAHNIETVRSLQRIVRDPRAAYDQSLAVLKHAKNCKDGMVTKSSIMLGLGETDEEVKQT
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: GDGDGIATATIMLLGDTCTRGCRFCAVKTSNKPPPPDALEPLRTAVAVASWGVDYVVLTSVDRDDLPDGGSGHFAQTVKALKELKPGILVECLTSDFRGDLEAVSSLASSGLDVFAHNIETVRSLQRIVRDPRAAYDQSLAVLKHAKNCKDGMVTKSSIMLGLGETDEEVKQTMCDLRAIDVDILTLGQYLQPTERHLRVREYVTPEKFDFWKEYGESLGF
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MTQCSAFSGIFFRNWIFIRGVPTIQFLPPEGPPEIAFAGRSNVGKSSLINALVQQKGLARTSNTPGRTQELNYFVPDGFSGSKEDFPPMALVDMPGYGFAQAPKNLVDAWTHLVFNYLRGRTTLKRVYILIDSRHGIKKNDEEVLDLLDKAAVSYQIILTKSDKIKSNMLENLMTTTQMSLLKRPAAYPELLTTSAEKALGLEELRTAILQAVVQ

Annotated regions:
phrase: EIAFAGRSNVGKSSLINALVQQKGLARTSNTPGRTQELNYFVPDGFSGSKEDFPPMALVDMPGYGFAQAPKNLVDAWTHLVFNYLRGRTTLKRVYILIDSRHGIKKNDEEVLDLLDKAAVSYQIILTKSDKIKSNMLENLMTTTQMSLLKRPAAYPELLTTSAEKALGLEELRTAIL
type: DOMAIN
name: G_ENGB_dom
description: EngB-type guanine nucleotide-binding (G) domain

phrase: GPPEIAFAGRSNVGKSSLINALVQQKGLARTSNTPGRTQELNYFVPDGFSGSKEDFPPMALVDMPGYGFAQAPKNLVDAWTHLVFNYLRGRTTLKRVYILIDSRHGIKKNDEEVLDLLDKAAVSYQIILTKSDKIKSNMLENLMTTTQMSLLKRPAAYPELLTTSAEKALGLEELRTAILQAVV
type: DOMAIN
name: G_ENGB_dom
description: EngB-type guanine nucleotide-binding (G) domain

phrase: EIAFAGRSNVGKSSLINALVQQKGLARTSNTPGRTQELNYFVPDGFSGSKEDFPPMALVDMPGYGFAQAPKNLVDAWTHLVFNYLRGRTTLKRVYILIDSRHGIKKNDEEVLDLLDKAAVSYQIILT
type: DOMAIN
name: GTP-bd
description: GTP binding domain
Protein sequence:
MESLNALLQGMGLMHLGAGQAIMLLVSLLLLWLAIAKKFEPLLLLPIGFGGLLSNIPEAGMALTALESLLAHHDAGQLAVIAAKLNCAPDVHAIKEALALALPSVQNQMENLAVDMGYTPGVLALFYKVAIGSGVAPLVIFMGVGAMTDFGPLLANPRTLLLGAAAQFGIFATVLGALTLNYFGLIAFTLPQAAAIGIIGGADGPTAIYLSGKLAPELLGAIAVAAYSYMALVPLIQPPIMRALTSEKERKIRMVQLRTVSKREKILFPVVLLLLVALLLPDAAPLLGMFCFGNLMRESGVVERLSDTVQNGLINIVTIFLGLSVGAKLVADKFLQPQTLGILLLGVIAFGIGTAAGVLMAKLLNLCSKNKINPLIGSAGVSAVPMAARVSNKVGLESNPQNFLLMHAMGPNVAGVIGSAIAAGVMLKYVLAM

Annotated regions:
Protein sequence:
MRTHYCGQVTAADLDQTVTLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAETFHTAESIRNEFVIELTGKVRRRPAGTENPNLVSGEIEVLCHTLEVLNASATPPFQLDDDNLSENVRLTHRVIDLRRPQMQKNLMLRYKVAMAFRRFLDAQGFIDVETPMLTKSTPEGARDYLVPSRVHPGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQVDIETSFLDEAEITAIMEDMIRYVFREALAVELPNPFPRMTHAEAMRRYGSDKPDLRVTLELTDVTDAVQDVAFKVFSGPATSGGRVAALRVPGGASLTRGEIDEYTKFVGIYGARGLAYIKVNDVTKPNDEGLQSPIVKNLHEEALRTILERTGAESGDLIFFGADKTKVVNDALGALRTKLGHEKGYVSGAAWTPVWVVDFPMFEYDDESKRWVACHHPFTAPKDEHVELLESAPGECLAKAYDLALNGWEIGGGSVRIHRADMQSKVFRALNIGDEEAQLKFGFLLDALKYGAPPHGGLAFGLDRVVTLMTGAESIRDVIAFPKTQRAQCLLTDAPGEVDDKQLRELHIRLRQKIETQVEVAKA

Annotated regions:
phrase: FSGPATSGGRVAALRVPGGASLTRGEIDEYTKFVGIYGARGLAYIKVNDVTKPNDEGLQSPIVKNLHEEALRTILERTGAESGDLIFFGADKTKVVNDA
type: DOMAIN
name: GAD_dom
description: GAD domain

phrase: VTLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAETFHTAESIRNEFVIELTGKVRRRPAGTENPNLVSGEIEVLCHTLEV
type: DOMAIN
name: NA-bd_OB_tRNA
description: OB-fold nucleic acid binding domain, AA-tRNA synthetase-type

phrase: LMLRYKVAMAFRRFLDAQGFIDVETPMLTKSTPEGARDYLVPSRVHPGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQVDIETSFLDEAEITAIMEDMIRYVFREALAVELPNPFPRMTHAEAMRRYGSDKPDLRVTLELTDVTDAVQDVAFKVFSGPATSGGRVAALRVPGGASLTRGEIDEYTKFVGIYGARGLAYIKVNDVTKPNDEGLQSPIVKNLHEEALRTILERTGAESGDLIFFGADKTKVVNDALGALRTKLGHEKGYVSGAAWTPVWVVDFPMFEYDDESKRWVACHHPFTAPKDEHVELLESAPGECLAKAYDLALNGWEIGGGSVRIHRADMQSKVFRALNIGDEEAQLKFGFLLDALKYGAPPHGGLAFGLDRVVTLMTGAESIRDVIAFPKTQ
type: DOMAIN
name: AspRS_core
description: Aspartate-tRNA ligase, type 1, core domain

phrase: RTHYCGQVTAADLDQTVTLCGWVHRRRDHGGVIFIDLRDREGLVQVVCDPDRAETFHTAESIRNEFVIELTGKVRRRPAGTENPNLVSGEIEVLCHTLEVLNASATPPFQLDDDNLSENVRLTHRVIDLRRPQ
type: DOMAIN
name: Asp-tRNA-ligase_1_N
description: Aspartate-tRNA ligase, type 1, anticodon recognition domain

phrase: ENVRLTHRVIDLRRPQMQKNLMLRYKVAMAFRRFLDAQGFIDVETPMLTKSTPEGARDYLVPSRVHPGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQVDIETSFLDEAEITAIMEDMIRYVFREALAVELPNPFPRMTHAEAMRRYGSDKPDLRVTLELTDVTDAVQDVAFKVFSGPATSGGRVAALRVPGGASLTRGEIDEYTKFVGIYGARGLAYIKVNDVTKPNDEGLQSPIVKNLHEEALRTILERTGAESGDLIFFGADKTKVVNDALGALRTKLGHEKGYVSGAAWTPVWVVDFPMFEYDDESKRWVACHHPFTAPKDEHVELLESAPGECLAKAYDLALNGWEIGGGSVRIHRADMQSKVFRALNIGDEEAQLKFGFLLDALKYGAPPHGGLAFGLDRVVTLMTGAESIRDVIAFPKT
type: DOMAIN
name: Aa-tRNA-synt_II
description: Aminoacyl-tRNA synthetase, class II (D/K/N)

phrase: LMLRYKVAMAFRRFLDAQGFIDVETPMLTKSTPEGARDYLVPSRVHPGQFFALPQSPQLFKQLLMVAGFDRYYQITKCFRDEDLRADRQPEFTQVDIETSFLDEAEITAIMEDMIRYVFREALAVELPNPFPRMTHAEAMRRYGSDKPDLRVTLELTDVTDAVQDVAFKVFSGPATSGGRVAALRVPGGASLTRGEIDEYTKFVGIYGARGLAYIKVNDVTKPNDEGLQSPIVKNLHEEALRTILERTGAESGDLIFFGADKTKVVNDALGALRTKLGHEKGYVSGAAWTPVWVVDFPMFEYDDESKRWVACHHPFTAPKDEHVELLESAPGECLAKAYDLALNGWEIGGGSVRIHRADMQSKVFRALNIGDEEAQLKFGFLLDALKYGAPPHGGLAFGLDRVVTLMTGAESIRDVIAF
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II
Protein sequence:
MKVVPEKNAVRILWGRERGTRAMGAQRLLQELVEDKTRWMKWEGKRVELPDSPRSTFLLAFSPDRTLLASTHVNHNIYITEVKTGKCVHSLIGHRRTPWCVTFHPTISGLIASGCLDGEVRIWDLHGGSESWFTDSNNAIASLAFHPTAQLLLIATANEIHFWDWSRREPFAVVKTASEMERVRLVRFDPLGHYLLTAIVNPSNQQGDDEPEIPIDGTELSHYRQRALLQSQPVRRTPLLHNFLHMLSSRSSGIQTEPFHPPEQASSTQQDQGLLNRPSAFSTVQSSTAGNTLRNLSLGPTRRSLGGPLSSHPSRYHRELAPGLTGSEWTRTVLTLNSRSEVESMPPPRTSASSVSLLSVLRQQEGGSQASVYTSATEGRGFPSSGLATESDGGNGSSQNNSGNIRHELQCDLRRFFLEYDRLQELDQSLSGETPQTQQAQEMLNNNIESERPGPSHQPTPHSSENNSNLSRGHLNRCRACHNLLTFNNDTLRWERTTPNYSSGEASSSWHVSTTFEGMPPSGNQLPPLERTEGQMPNSSRLELSSSASSQEERTVGVAFNQETGHWERIYTQSSRSGTVSQEALHQDMPEESSEEDSLRRLSPAAYYAQRMIQYLSRRDSIRQRSMRYQQNRLRSSTSSSSSDNQGPSVEGTDLEFEDFEDNGDRSRHRAPRNARMSAPSLGRFVPRRFLLPEYLPYAGIFHERGQPGLATHSSVNRVLAGAVIGDGQSAVASNIANTTYRLQWWDFTKFDLPEISNASVNVLVQNC

Annotated regions:
phrase: IASGCLDGEVRIWD
type: CONSERVED_SITE
name: WD40_repeat_CS
description: WD40 repeat, conserved site

phrase: GKCVHSLIGHRRTPWCVTFHPTISGLIASGCLDGEVRIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LIGHRRTPWCVTFHPTISGLIASGCLDGEVRIWD
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: TGKCVHSLIGHRRTPWCVTFHPTISGLIASGCLDGEVRIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: HGGSESWFTDSNNAIASLAFHPTAQLLLIATANEIHFW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: PDSPRSTFLLAFSPDRTLLASTHVNHNIYIT
type: REPEAT
name: WD40_rpt
description: WD40 repeat
Protein sequence:
MARGDAPRDSYHLVGISFFILGLGTLLPWNFFITAIPYFQARLAGAGNSTARILSTNHTGPEDAFNFNNWVTLLSQLPLLLFTLLNSFLYQCVPETVRILGSLLAILLLFALTAALVKVDMSPGPFFSITMASVCFINSFSAVLQGSLFGQLGTMPSTYSTLFLSGQGLAGIFAALAMLLSMASGVDAETSALGYFITPCVGILMSIVCYLSLPHLKFARYYLANKSSQAQAQELETKAELLQSDENGIPSSPQKVALTLDLDLEKEPESEPDEPQKPGKPSVFTVFQKIWLTALCLVLVFTVTLSVFPAITAMVTSSTSPGKWSQFFNPICCFLLFNIMDWLGRSLTSYFLWPDEDSRLLPLLVCLRFLFVPLFMLCHVPQRSRLPILFPQDAYFITFMLLFAVSNGYLVSLTMCLAPRQVLPHEREVAGALMTFFLALGLSCGASLSFLFKALL

Annotated regions:
Protein sequence:
MMKINSYAKINLSLDVLDLREDGYHNIDTIMNLIDLHDVIEINRNNTNELKLSSNNSNFPTDKTNLIYKIFENLKKFRKINCSYDVFVDKQIPISAGLAGGSSNACEFLMYVNDDLSLNLSNQEIKEICRLTGADTFYFTSKKCVRATGIGNEFVRLSDFSNKNIIIVNNGMSISSKDVYDNLKESNGGLGKITVAIDSRDYETFYRKAFNTMESVSERLVEEISDIKEQLNNLGCDLSLMSGSGPTVFGIFENYNDYENCYSKLKDKYKYVFKTKTL

Annotated regions:
phrase: AIDSRDYETFYRKAFNTMESVSERLVEEISDIKEQLNNLGCDLSLMSGSGPTVFGIFENYNDYENCYSKLKDKY
type: DOMAIN
name: GHMP_kinase_C_dom
description: GHMP kinase, C-terminal domain

phrase: NLIYKIFENLKKFRKINCSYDVFVDKQIPISAGLAGGSSNACEFLMYVNDDLSLNLSNQEIKEICRLTG
type: DOMAIN
name: GHMP_kinase_N_dom
description: GHMP kinase N-terminal domain