nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSRQVVRSSKFRHVFGQPAKADQCYEDVRVSQNTWDSGFCAVNPKFVALICEASGGGAFLVLPLGKTGRVDKNVPMVCGHTAPVLDIAWCPHNDNVIASGSEDCSVMVWEIPDGGLTLPLREPVVTLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGVAVLTLGSDVHPDTIYSVDWSRDGALICTSCRDKRVRIIEPRKGTIVAEKDRPHEGTRPVRAVFVSDGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVNKCEIARFYKLHERKCEPIAMTVPRKSDLFQEDLYPPTAGPDAALTAEEWLGGRDAGPLLISLKDGYVPPKSRELRVNRGLDTGRKRTTPEASGAPSSDAISRLEEEMRKLQATVQELQKRLDRLEETVQAK

Annotated regions:
phrase: QVVRSSKFRHVFGQPAKADQCYEDVRVSQNTWDSGFCAVNPKFVALICEASGGGAFLVLPLGKT
type: DOMAIN
name: DUF1899
description: Domain of unknown function DUF1899

phrase: EPVVTLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: HPDTIYSVDWSRDGALICTSCRDKRVR
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: CGHTAPVLDIAWCPHNDNVIASGSEDCSVMV
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: VCGHTAPVLDIAWCPHNDNVIASGSEDCSVMVWE
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LDTGRKRTTPEASGAPSSDAISRLEEEMRKLQATVQELQKRLDRLEETVQA
type: DOMAIN
name: Trimer_CC
description: Trimerisation motif

phrase: VVRSSKFRHVFGQPAKADQCYEDVRVSQNTWDSGFCAVNPKFVALICEASGGGAFLVLPLGKTG
type: DOMAIN
name: DUF1899
description: Domain of unknown function DUF1899

phrase: IASGSEDCSVMVWE
type: CONSERVED_SITE
name: WD40_repeat_CS
description: WD40 repeat, conserved site

phrase: DKNVPMVCGHTAPVLDIAWCPHNDNVIASGSEDCSVMVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: TGVAVLTLGSDVHPDTIYSVDWSRDGALICTSCRDKRVRII
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LREPVVTLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGVAVL
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LLSAGCDNVILVWD
type: CONSERVED_SITE
name: WD40_repeat_CS
description: WD40 repeat, conserved site
Protein sequence:
MSKKILYGKEARKALLQGVDAIANTVKVTLGPKGRNVILEKAYDSPAIVNDGVSIAKEIELKNPYQNMGAKLVYEVASKTNDKAGDGTTTATVLAQSMIHRGFDAIDAGANPVLVKEGIELAALTVAKKLLAKSKKVDAQEDIQNVAAVSSGSQEIGKIIAQAMQKVGKDGVINVDESKGFETELEVVEGLQYDKGYASPYFVSDRESMTVQLENALVLVTDHKISTVQEIVPILEEVVKASRPLLIVAEAVENEVLGVLVANKLRGTFNVVVTNAPGFGDNQKEMLQDIAVLTKANFVSKELNMKLADLKMDDLGNINKAIIKKDNTTLISNSKSPELEKRIQVLKTQIKNATSDYETKNLQERLAKLSGGVALIKVGAATDTELKDKKLRIEDALNATKAAITEGIVVGGGKALVEVYQELKDTLVSDNKEVQQGIDVVVQSLLVPTYQIAYNAGFSGKDVVKQQLLQPLNFGFNAKEGKYVCLLKEGIIDPTKVTRQAVLNAASISALMITTEAAVVSLKENKDNNFDLGTQE

Annotated regions:
Protein sequence:
MGVKLALVGATGMVGRTFLTVLKERNFPIDELYLFSSAKSAGEKVEFNGKEYTVEELTETSFDRGIDIALFSAGGDVSKKFAPIAASKGCTVVDNSSAWRMDKEVPLVVPEVNAEDIKWNKGIIANPNCSTIQAMVALKPLDNKYKIKRVIYSTYQAVAGAGVAGYADLEEGSLNGAAPKKFQHQIAYNLIPHIDVFMENGYTKEETKMIEETKKILHRDDIKVTATTVRVPVYYGHSESINIELENEFDVNEVRDLLASSDGIVVMDDPSKNEYPMPALLAGRDEVFVGRIRRDESVDNGINMWVVADNIRKGAATNAVQIAELLVK

Annotated regions:
phrase: KLALVGATGMVGRTFLTVLKERNFPIDELYLFSSAKSAGEKVEFNGKEYTVEELTETSFDRGIDIALFSAGGDVSKKFAPIAASKGCTVVDNSSAWRMDKEVPLVVPEVNAEDIKW
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: LKPLDNKYKIKRVIYSTYQAVAGAGVAGYADLEEGSLNGAAPKKFQHQIAYNLIPHIDVFMENGYTKEETKMIEETKKILHRDDIKVTATTVRVPVYYGHSESINIELENEFDVNEVRDLLASSDGIVVMDDPSKNEYPMPALLAGRDEVFVGRIRRDESVDNGINMWVVADNIR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: KLALVGATGMVGRTFLTVLKERNFPIDELYLFSSAKSAGEKVEFNGKEYTVEELTETSFDRGIDIALFSAGGDVSKKFAPIAASKGCTVVDNSSAWRMDKEVPLVVPEVNAEDI
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MAFALLRPVGAHVLYPDVRLLSEDEENRSESDASDQSFGCCEGPEAARRGPGPGGGRRAGGGGGAGPVVVVRQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETVRLASSYIAHLANVLLLGDSADDGQPCFRAAGSAKGAVPAAADGGRQPRSICTFCLSNQRKGGGRRDLGGSCLKVRGVAPLRGPRR

Annotated regions:
phrase: NARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETVRLASSYIAHLANVLL
type: DOMAIN
name: bHLH_dom
description: Myc-type, basic helix-loop-helix (bHLH) domain

phrase: RQRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETVRLASSYIAH
type: DOMAIN
name: bHLH_dom
description: Myc-type, basic helix-loop-helix (bHLH) domain

phrase: QRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETVRLASSYIAH
type: DOMAIN
name: bHLH_dom
description: Myc-type, basic helix-loop-helix (bHLH) domain
Protein sequence:
MSIDIDIIKARAKNEYRLSKVRGEAMISVRIPGGILPAHLLTVARDIAETWGNGQIHLTTRQKLAMPGIRYEDIDNVNAALEPFLREIEIELCDVQVEDTKAGYLAIGGRNIVACQGNRICQKANTDTTGLSRRLEKLVYPSPYHLKTVIVGCPNDCAKASMADLGIIGVAKMRFTADRCIGCGACVKACSHHAVGCLALKNGKAVKEESACIGCGECVLACPTLAWQRKPDQLWQVRLGGRTSKKTPRVGKLFLNWVTEDVIKQVIVNLYEFEKEMLGGKPIYLHMGHLIDKGGYLRFKERVLRGVQLNPEAMVAERIYWAEDESVARMHLKPAGH

Annotated regions:
phrase: KMRFTADRCIGCGACVKACSHHAVGCLALKNGKAVKEESACIGCGECVLAC
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: AKMRFTADRCIGCGACVKACSHHAVGCLA
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: CIGCGECVLAC
type: CONSERVED_SITE
name: 4Fe4S_Fe_S_CS
description: 4Fe-4S ferredoxin, iron-sulphur binding, conserved site

phrase: VGCPNDCAKASMADLG
type: BINDING_SITE
name: NO2/SO3_Rdtase_FeS/sirohaem_BS
description: Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site

phrase: RNIVACQGNRICQKANTDTTGLSRRLEKLVYPSPYHLKTVIVGCPNDCAKASMADLGIIGVAKMRFTADRCIGCGACVKACSHHAVGCLALKNGKAVKEESACIGCGECVLACPTLAWQRKPDQLWQVRLGGRTSKKTPRVGKLFLNWVTEDVIKQVIVNLYEFEKEMLGGKPIYLHMGHLIDKGGYLRFKER
type: DOMAIN
name: NO2/SO3_Rdtase_4Fe4S_dom
description: Nitrite/sulphite reductase 4Fe-4S domain

phrase: EAMISVRIPGGILPAHLLTVARDIAETWGNGQIHLTTRQKLAMPGIRYEDIDNVNAAL
type: DOMAIN
name: NiRdtase/SiRdtase_haem-b_fer
description: Nitrite/Sulfite reductase ferredoxin-like domain

phrase: GKAVKEESACIGCGECVLACPTLAWQRKP
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: RNIVACQGNRICQKANTD
type: BINDING_SITE
name: NO2/SO3_Rdtase_FeS/sirohaem_BS
description: Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site

phrase: VGCPNDCAKASMADLGII
type: BINDING_SITE
name: NO2/SO3_Rdtase_FeS/sirohaem_BS
description: Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site
Protein sequence:
MQKIAKQALSSLSSLAKSPANAMGSISHLPAYGHRLLPVLIDEISRDEPDRVLFYTPRNGQPSQGYDEVTTKIFANAIDRLCGWLDSQLGSPTVSKTIAYIGQNDLRYFIIMIASTKLGHRLLLSSPRNSVEGHVSLIKQSGCELWIASSGLGHHEFLQDLHIPSVEAPELSELLDPTLAKPYIYQKSWHEGKSDVLALLHTSGSTGLPKLVPVYLETAATVDGFHLMEPTDGKRPTGVEWTGTRQLCAMPLFHVAGICLGLYSAVFFNWIVVLPSVGPIMQHVIEDALDHISLDSAFISPSVLQDISKSSRVLEKLSKLKFITSAGGPIPQSVGDLIHPRVPIMQTMGMTEGQWLASVVMHPDEWAYYYFHPRTGVEMRPYSEDLFELVFVQNPKLSATQPVFKTFPDLDIWETKDLYSRHPKHPDLWKYEMRRDDLIILSNGEKFNPLAAEGKLISHPWIAAAYLTGRGRFQTAALIYPDDSSFNNSDDTIIDNIWPTFEEVNKSLPAFAQIHRDFVKIVRTPFPCTPKGTLARNETEKSFNADINAIYDRSTHGKPSVHINGTTEDVVRSGIREAIETVSGLVDLKDDDNIFTRGFDSLHVIRLAGLLSSAFYQPLEVEPGTIYTNPTISQLSHSVWTHLEYGPQDRIHHSEVTLEMLAKYIQAFEPPRESKEHIVLTGTTGEIGSYLLDDICKNDKVAKVWCLNRSVDAFQRQVDSAKSKGLSSNWQSKAKFVRYDVTSENLGLSQDDLEEIKNEATAIIHNAWEVNFNLPLSSFDPQFVGLQGLVDVCRATRHKIRFFFVSSISAAMNWPSDLLGPVPEASISRFDAPINGYGSSKLVAEHLLSKAARSGVLSLSVLRVGQVAGPVRTLGEGSIWTRRDWVPAIIDASVHLRALPLDLGSASILDWIPIDLLAEVIGQLVVPVNPVVGQENYYNLLNPRTPSWKDTLPGLKAHLEASFSEKFEIIPLQEWINRMRGAEKTIVKEVSEGSSETARRAQSGLKLLAFFETLASETEGSRGLEWSKANALAQSSILACMEPVSSAWFDTWLTQWGY

Annotated regions:
phrase: LTGTTGEIGSYLLDDICKNDKVAKVWCLNRSVDAFQRQVDSAKSKGLSSNWQSKAKFVRYDVTSENLGLSQDDLEEIKNEATAIIHNAWEVNFNLPLSSFDPQFVGLQGLVDVCRATRHKIRFFFVSSISAAMNWPSDLLGPVPEASISRFDAPINGYGSSKLVAEHLLSKAARSGVLSLSVLRVGQVAGPVRTLGEGSIWTRRDWVPAIIDASVHLRALPLDLGSASILDWIPIDLLAEV
type: DOMAIN
name: Far_NAD-bd
description: Fatty acyl-coenzyme A reductase-like, NAD-binding domain

phrase: EPDRVLFYTPRNGQPSQGYDEVTTKIFANAIDRLCGWLDSQLGSPTVSKTIAYIGQNDLRYFIIMIASTKLGHRLLLSSPRNSVEGHVSLIKQSGCELWIASSGLGHHEFLQDLHIPSVEAPELSELLDPTLAKPYIYQKSWHEGKSDVLALLHTSGSTGLPKLVPVYLETAATVDGFHLMEPTDGKRPTGVEWTGTRQLCAMPLFHVAGICLGLYSAVFFNWIVVLPSVGPIMQHVIEDALDHISLDSAFISPSVLQDISKSSRVLEKLSKLKFITSAGGPIPQSVGDLIHPRVPIMQTMGMTEGQWLASVVMHPDEW
type: DOMAIN
name: AMP-dep_synth/lig_dom
description: AMP-dependent synthetase/ligase domain

phrase: IREAIETVSGLVDLKDDDNIFTRGFDSLHVIRLAGLLSSAFYQPLEVEPGTIYTNPTISQLS
type: DOMAIN
name: PP-bd_ACP
description: Phosphopantetheine binding ACP domain

phrase: TTEDVVRSGIREAIETVSGLVDLKDDDNIFTRGFDSLHVIRLAGLLSSAFYQPLEVEPGTIYTNPTISQLSHSVWTH
type: DOMAIN
name: PP-bd_ACP
description: Phosphopantetheine binding ACP domain

phrase: LLHTSGSTGLP
type: CONSERVED_SITE
name: AMP-binding_CS
description: AMP-binding, conserved site
Protein sequence:
MNPTLAVLGAGAKAVAVAAKASVLRDMGVDVPDVIAVERIGVGANWQASGGWTDGAHRLGTSPEKDVGFPYRSALVPRRNAELDERMTRYSWQSYLIATASFAEWIDRGRPAPTHRRWSQYLAWVADHIGLKVIHGEVERLAVTGDRWALCTHETTVQADALMITGPGQAEKSLLPGNPRVLSIAQFWDRAAGHDRINAERVAVIGGGETAASMLNELFRHRVSTITVISPQVTLFTRGEGFFENSLFSDPTDWAALTFDERRDALARTDRGVFSATVQEALLADDRIHHLRGRVAHAVGRQGQIRLTLSTNRGSENFETVHGFDLVIDGSGADPLWFTSLFSQHTLDLLELGLGGPLTADRLQEAIGYDLAVTDVTPKLFLPTLSGLTQGPGFPNLSCLGLLSDRVLGAGIFTPTKHNDTRRSGEHQSFR

Annotated regions:
Protein sequence:
MRTGEIHRVTGETDVSVRLGLDGSGRCQASTGVPFLDHMLHQISSHGLIDLEITASGDTHIDDHHTNEDVGIAFGQALSKALGDRRGIYRFGHFVAPLDEALVQVVLDCSGRPHISWGLTIPTQKIGTYDTELVKEFFVAVVNNSGLTLHIRQLDGVNSHHIVEACFKAFSRALRMATEIDPRRSGLVPSSKGVLEQAGGS

Annotated regions:
phrase: IDDHHTNEDVGIA
type: CONSERVED_SITE
name: ImidazoleglycerP_deHydtase_CS
description: Imidazoleglycerol-phosphate dehydratase, conserved site

phrase: GVNSHHIVEACF
type: CONSERVED_SITE
name: ImidazoleglycerP_deHydtase_CS
description: Imidazoleglycerol-phosphate dehydratase, conserved site
Protein sequence:
MKLIFATNNKHKIEEAQALLSPHFQIISLKQLNCTEEIPETEPTLEGNALLKARYVYERFGESCFADDTGLEVEILNNAPGVYSARYAGEDKDPQANRVKLLKELEGAINRKARFRTVIAFIHKGKEYLFEGEVKGSITMHDRGNGGFGYDPLFQPEGMDKTFAELDMSVKNDISHRGKAIARLVDFLHQLE

Annotated regions:
Protein sequence:
MTNLRKTHPLMKIINSSFIDLPAPSNISSWWNFGSLLGVCLIIQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGLYYGSYMYLETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSDLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAGVHLLFLHETGSNNPSGLSSDADKIPFHPYYTIKDILGVLLLILVLTSLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAVIPLLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASILYFLLILVIMPITSLLENNLLKW

Annotated regions:
phrase: IDLPAPSNISSWWNFGSLLGVCLIIQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGLYYGSYMYLETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSDLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAGVHLLFLHET
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: GLSSDADKIPFHPYYTIKDILGVLLLILVLTSLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAVIPLLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASILYFLLILVIMPITSLLENNLLK
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAVIPLLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASILY
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: PLMKIINSSFIDLPAPSNISSWWNFGSLLGVCLIIQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGLYYGSYMYLETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSDLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAGVHLLFLHETGS
type: DOMAIN
name: Cytochrome_b_N_euk/bac
description: Cytochrome b/b6, N-terminal domain, eukaryotic/bacterial

phrase: NPSGLSSDADKIPFHPYYTIKDILGVLLLILVLTSLVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAVIPLLHTSKQRSMMFRPFSQCLFWILVADLLTLTWIGGQPVEHPYIIIGQL
type: DOMAIN
name: Cytochrome_b_C_euk/bac
description: Cytochrome b/b6, C-terminal domain, eukaryotic/bacterial

phrase: MTNLRKTHPLMKIINSSFIDLPAPSNISSWWNFGSLLGVCLIIQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGLYYGSYMYLETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGSDLVEWIWGGFSVDKATLTRFFAFHFILPFIIAALAGVHLLFLHETGSNNP
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain
Protein sequence:
MTPEQSPLGKASTYTEQYDASLLFPIARKNAREAIGIGAQLPFFGTDIWNAYELSWLNARGKPQIAVATFFVPADSPNIVESKSFKLYLGSFAQTAFESMDAVRDTIRRDVSASCGATVSVHLTAPYKFGKLQMEEFEGLSLDRLDLDTDVYQPDASLLKAALHEAPVEETVFSNLLKSNCPVTGQPDWGSVQIHYVGPQIDHAGLLRYIISYRNHTGFHEQCVERIFVDVLKACKPVKLAVYARYTRRGGLDINPFRTNYNLPMPDNMRLARQ

Annotated regions:
phrase: YTEQYDASLLFPIARKNAREAIGIGAQLPFFGTDIWNAYELSWLNARGKPQIAVATFFVPADSPNIVESKSFKLYLGSFAQTAFESMDAVRDTIRRDVSASCGATVSVH
type: DOMAIN
name: QueF_N
description: NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal
Protein sequence:
MRKQWLGICIAAGMLAACTSDDGQQQTVSVPQPAVCNGPIVEISGADPRFEPLNATANQDYQRDGKSYKIVQDPSRFIQAGLAAIYDAEPGSNLTASGEAFDPTQLTAAHPTLPIPSYARITNLANGRMIVVRINDRGPYGNDRVISLSRAAADRLNTSNNTKVRIDPIIVAQDGSLSGPGMACTTVAKQTYALPAPPDLSGGAGTSSVSGPQGDILPVSNSTLKSEDPTGAPVTSSGFLGAPTTLAPGVLEGSEPTPAPQPVVTAPSTTPATSPAMVTPQAASQSASGNFMVQVGAVSDQARAQQYQQQLGQKFGVPGRVTQNGAVWRIQLGPFANKAEASTLQQRLQTEAQLQSFITTAQ

Annotated regions:
phrase: QSASGNFMVQVGAVSDQARAQQYQQQLGQKFGVPGRVTQNGAVWRIQLGPFANKAEASTLQQRLQTEAQLQSFITT
type: DOMAIN
name: SPOR-like_dom
description: Sporulation-like domain

phrase: ASGNFMVQVGAVSDQARAQQYQQQLGQKFGVPGRVTQNGAVWRIQLGPFANKAEASTLQQRLQTEAQLQSFI
type: DOMAIN
name: SPOR-like_dom
description: Sporulation-like domain

phrase: QAGLAAIYDAEPGSNLTASGEAFDPTQLTAAHPTLPIPSYARITNLANGRMIVVRINDRGPYGNDRVISLSRAAADRLNTSNNTKVR
type: DOMAIN
name: RlpA-like_DPBB
description: RlpA-like protein, double-psi beta-barrel domain

phrase: GLAAIYDAEPGSNLTASGEAFDPTQLTAAHPTLPIPSYARITNLANGRMIVVRINDRGPYGNDRVISLSRAAADRLNTSNNTKVRIDPIIVAQDGSLSG
type: DOMAIN
name: RplA
description: Rare lipoprotein A
Protein sequence:
MRVRGTRRNYPQWWIWGVLGFWMLMICNGGNGGKDLWVTVYYGVPVWKEAKTTLFCASDAKSYEREVHNVWATHACVPTDPNPNEMVLENVTENFNMWDNDMVEQMHEDIISLWDESLKPCVTLTPLCVTLNCTDAKYNENSSYTASSVLTNTSLQEVKNCSFNATTEIRDRKQKEYALFYRLDIVPLNEGSNKSNYRLINCNTTAMTQACPKINFEPIPIHYCAPAGYAILKCNNKTFNGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEEEIVIRSKNLSDNTQTIIVQLKEAVEIVCTRPSNNTRKSIRIGPGQAFYATGAIIGDIRRAHCNISGQNWTKTLQEVGKKLAEHFPNATIRFNASSGGDPEVVTHSFNCGGEFFYCNTSGLFHGTYSNGTYNSTDKSNGTANNSTITIQCRIKQIINMWQKVGQAMYAPPIAGNITCTSNITGLLLLRDGGERDNKTNNTETEETFRPGGGNMKDNWRSELYKYKVVEIKPLGIAPTEAKRRVVEREKRAVGIGAVFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNSSWSNKSQSEIWDNLTWMQWDREISNYTGIIYGLLEESQNQQEKNEKDLLALDSWKNLWSWFDISKWLWYIKIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQTLTQNPGDPDRLRGIEEEGGEQDKTRSIRLVNGFLALAW

Annotated regions:
phrase: LWVTVYYGVPVWKEAKTTLFCASDAKSYEREVHNVWATHACVPTDPNPNEMVLENVTENFNMWDNDMVEQMHEDIISLWDESLKPCVTLTPLCVTLNCTDAKYNENSSYTASSVLTNTSLQEVKNCSFNATTEIRDRKQKEYALFYRLDIVPLNEGSNKSNYRLINCNTTAMTQACPKINFEPIPIHYCAPAGYAILKCNNKTFNGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEEEIVIRSKNLSDNTQTIIVQLKEAVEIVCTRPSNNTRKSIRIGPGQAFYATGAIIGDIRRAHCNISGQNWTKTLQEVGKKLAEHFPNATIRFNASSGGDPEVVTHSFNCGGEFFYCNTSGLFHGTYSNGTYNSTDKSNGTANNSTITIQCRIKQIINMWQKVGQAMYAPPIAGNITCTSNITGLLLLRDGGERDNKTNNTETEETFRPGGGNMKDNWRSELYKYKVVEIKPLGIAPTEAKRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: MGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNSSWSNKSQSEIWDNLTWMQWDREISNYTGIIYGLLEESQNQQEKNEKDLLALDSWKNLWSWFDISKWLWYIKIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQTL
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: VQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNSSWSNKSQSEIWDNLTWMQWDREISNYTGIIYGLLEESQNQQEKNEKDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MRNSHATFSQEGSFYRPTLLKKVEKALESGDKKPIKTWSRRSMIIPNMIGLTIAVHNGRQHVPVFITDEMIGHKLGEFAPTRTYRGHAADKKAKKR

Annotated regions:
phrase: NGRQHVPVFITDEMIGHKLGEFAP
type: CONSERVED_SITE
name: Ribosomal_uS19_CS
description: Small ribosomal subunit protein uS19, conserved site
Protein sequence:
MTLSEKDKQYVWHPFTQAQTSPEPIPIVKGEGVWLFDEEGKKYIDANSSWWTIIHGHAHPYMVEQISNQLSILDHSIFAGATHPKAAEVGERITNVLPENFAKVFFSDNGSTAVEVAIKMVYQYWHNKGIKKKRFLAIEGSYHGDTFGAMSVGQRGYFNRPFEHLFFDVDFIPFPTKENINEVLVKAKELLSSGDFAGFIFEPLVQGAAGMRIYEADWLNELVSIAKEHEVMTIADEVMTGFYRSGKMFAIDHIQEEVDFVCMSKGLTGGVMAMGLTATTQKVFDAFLSDEIGTALLHGHSFTANPIACSAVCASLDLFEKENTQKGIEKIVSSHANFLEKIKGDKRFKSARQQGTILSLEIEMGDESSYFSPIRTEAYNYFLANEILLRPLGNVIFFNPPYVINEEELEHVYSHILKFLDEYFRA

Annotated regions:
phrase: IFFNPP
type: CONSERVED_SITE
name: DNA_methylase_N6_adenine_CS
description: DNA methylase, N-6 adenine-specific, conserved site
Protein sequence:
MLTERQELILKTIIMDFTQSHEPVGSKTVMNQLPVKVSSATVRNEMAALEEKGLLEKTHSSSGRIPSTAGYRYYLDHLINPVKIPASVYNRIIYQLDQPFQQVNEIVQEAAKILSDLTNYTAFAAGPETRSVKVTGFRIVPLSSHQVMAILVTDDGNVKNQIYTLPHHTNGEEIEKAVRLINDQLVGKPLSSVNEVLLKRIADHLVAGGSAPEILDLLQDVIKDAASEQMYVDGQINLLSNYESDDLAKVKSLYKLIDQNDAISSLIGFNPKDEIKNDSKSKVQVKLGSELQSDLLEDYSLLTAQYSVGKYGKGTIALLGPTNMPYSQMIGLLEYFRNELAKKLLDYYGRFK

Annotated regions:
phrase: EIVQEAAKILSDLTNYTAFAAGPETRSVKVTGFRIVPLSSHQVMAILVTDDGNVKNQIYTLPHHTNGEEIEKAVRLINDQLVGKPLSSVNEVLLKRIADHLVAGGSAPEILDLLQDVIKDAASEQMYVDGQINLLSNYESDDLAKVKSLYKLIDQNDAISSLIGFNPKDEIKNDSKSKVQVKLGSELQSDLLEDYSLLTAQYSVGKYGKGTIALLGPTNMPYSQM
type: DOMAIN
name: HrcA_C
description: Heat-inducible transcription repressor HrcA, C-terminal
Protein sequence:
MSSLLKTDFNVSKYRLIAQKREANAVEIEAALEVVREFIIKKKLILYGGIAIDYALHLKGSSIYPEGERPDFDMFSPNHVEDAYELADILYEKGFKQVGTVRAIHVQTMRVRTDFVWVADLSYMPPNIFDTIPTLTYKNLKIIHPDYQRAGLHLAFCFPFDNPPREDVFSRFKKDLQRYNLIEKYYPIPVVPVKSTYESKTFSIPFKQVAIHGFAAYALLYQTLNELRITCKVPEWKTEFPQPSYSYHKNDKNITLTVDMPRAYPALVLATYNPEGVIKEMGLHLTEICEPYMDYSPPIFKTNDIHFFSTMFKELAISIIQDNLIVVSPQYLLLYFLYGAFATPADKSLFLFYYNATLWILEKADSLLNIIQKQTSPEEFTRFANTSPFVLTTRVLSCSQERCTFSPAYRISLANDVQQSQLPLPKTHFLSNSLPDISTLPYNYYPGKGKEKPTNFNYEKNLLFNIGGKCTPSAM

Annotated regions:
phrase: EVVREFIIKKKLILYGGIAIDYALHLKGSSIYPEGERPDFDMFSPNHVEDAYELADILYEKGFKQVGTVRAIHVQTMRVRTDFVWVADLSYMPPNIFDTIPTLTYKNLKIIHPDYQRAGLHLAFCFPFD
type: DOMAIN
name: PolyA_pol_cat_su
description: Poly(A) polymerase catalytic subunit
Protein sequence:
MKKRLHLIIADSELELVPESIIDHPAIVNYAKRRKKKPEKIILDSTYHHAALRQLEDGERRGRPDIVHICLLNALDSILNKEDRLRVYVHTRNDEVIYVDPSTRLPRNYNRFIGLMESLFEKKVVPEDLQLLRLEKKTLAELINEISPDAVFIMHENGEFMIPKHFGKLLASFKKPVVIVGGFPHGDFRSKVEGVKISLYREPLMAWTIVNEVIVSYEWEVIK

Annotated regions:
Protein sequence:
MKHFEANFDGLVGPTHNYAGLSFGNVASLNNAALVSNPKAAAKQGLQKAKALADLGMIQGMLAPQERPDLNTLRRIGFSGSDAQVLQQAAKTAPALLNACCSASSMWTANAATVSPSADTRDGKLHFTPANLVDKLHRSIEPITTGRILTATFNDPHYFYHHNHLPEHNSFGDEGAANHTRLCQEYGHAGVELFVYGQEATNPHAPKPLKFPARQTLEASMAIARLHQLEEDNCVFIQQNPAVIDQGVFHNDVIAVGNQNVLFYHEQAFLNTQAKLDEIKRKLDTELYFIEVPTAKVSINDAVKSYLFNTQIITLPSGEMAIIAPTDCQENPAVYAYLNELLSLNTPIKQVLYFDVKQSMQNGGGPACLRLRVAMNEREVAAVNQHTLLTDALFTRLNTWVEKHYRDRLSTEDLADPQLVIESRTALDELTQIMKLGSVYPFQR

Annotated regions:
Protein sequence:
MIAAPLDAVADSKGKKPFYSHLYVQVLAAIAAGILLGHFYPELGTQLKPLGDAFIKLVKMVIAPVIFLTVATGIAGMSDLKKVGRVAGKAMLYFLTFSTLALVIGMIVANVVQPGAGMNIDPASLDPKAVATFADKAHEQSIVGFLTNIIPTTIVGAFADGDILQVLFFSVLFGIALAMVGEKGEQVVTFLNALTAPIFKLVGILMKAAPIGAFGAMAFTIGKYGIGSIANLAMLIGTFYITSLLFVLVVLGAVARYNGFSILALLRYIKEELLLVLGTSSSEAALPGLMNKMEKAGCKRSVVGLVIPTGYSFNLDGTNIYMTLAALFIAQATGIQLSWGDQILLLLVAMLSSKGAAGITGAGFITLAATLSVVPSVPVAGMALILGIDRFMSECRALTNLVGNAVATIVVARWENELDTGQLARALGGESEDTSTAGLQPAE

Annotated regions:
phrase: PLGDAFIKLVKMVIA
type: CONSERVED_SITE
name: Na-dicarboxylate_symporter_CS
description: Sodium:dicarboxylate symporter, conserved site

phrase: PTGYSFNLDGTNIYMTLAALFIA
type: CONSERVED_SITE
name: Na-dicarboxylate_symporter_CS
description: Sodium:dicarboxylate symporter, conserved site
Protein sequence:
MFVSIPNIRKAVVSLSVVPLLAACAFAPGMRFDPQRPLDPADNASVPKITPITPDLVRAGQTQAQVQASHENADVGPLLAKATPYRIGTGDILSIVVWDHPELVFPTQTYSIGSTYDLASFGGAPSVSGYVVSTGGDIQFPYAGVIKVAGKTQNEVRDEISRGIARVVKDPQVTVRVLAYRSQRVYVDGEVKTPGQQSIDDVPMTLVEALNRAGGINTTTGDNSRIRLTRGGKQWTLSMPALMQQGIDPANILLRGGDIVRVEQREDSKVFVTGEVVRPSTVLPRNGRLTLSEALGEAGGVSPVSSDPRNVYVIRRAAEGEPQVYHLDAKSPVALALAEGFELKPKDVVYVDAGSLVRWSRVINLLVPTATPLIGAAAVAK

Annotated regions:
phrase: KATPYRIGTGDILSIVVWDHPELVFPTQTYSIGSTYDLASFGGAPSVSGYVVSTGGDIQFPYAGVIKVAGKTQNEVRDEISRGIARVVKDPQVTVR
type: DOMAIN
name: Poly_export_N
description: Polysaccharide export protein, N-terminal domain

phrase: KVFVTGEVVRPSTVLPRNGRLTLSEALGEAGGVSPVSSDPRNVYVIRRAAEGEPQVYHLDAKSPVALALAEGFELKPKDVVY
type: DOMAIN
name: SLBB_dom
description: SLBB domain

phrase: QRVYVDGEVKTPGQQSIDDVPMTLVEALNRAGGINTTTGDNSRIRLTRGGKQWTLSMPALMQQGIDPANILLRGGDIVR
type: DOMAIN
name: SLBB_dom
description: SLBB domain
Protein sequence:
MEMNLLQKLCVVCSKCNEYAMELECLKYCDPNVLLAESTPFKRNAAAIVYLYRKIYPEVVAQNRTQSSLLTLYLEMLLKALHEDTALLDRALMAYSRQPDRAAFYRTVLRLDRCDRHHTVELQFTDNVRFSVSLATLNDIERFLCKMNYVYGILAPEAGLEVCAQLLELLRRLCGISPVARQEVYVEGTTCAQCYEELTIIPNQGRSLNKRLQGLLCNHIAVHRPSSQSDVNIQTVEQDLLDLTTRIPHLAGVLSALKSLFSSSSAYHSYIQEAEEALREYNLFTDIPERIYSLSDFTYWSRTSEVIVKRVGITIQQLNVYHQLCRALMNGISRHLYGEDVEDIFVLGEKALDGEERMFVGSVFAAPNRIIDLITSLSIQAFEDNPVFNKLHESNEMYTKIKHILEEIRRPLPDGTGGDGPEGEVIHLRGREAMSGTGTTLMTASNSSNSSTHSQRNNGGGGRARGGGKKAVGGGANGQDGDGSENGLRVRNCDEHEALDLVDARSRIHNVTREVNVRKRAYLQKVSEVGYGKVIRCIKTQERLTSKLIDVNLVGPLCLDFISKLMNGFLYRSQYHQDQDVVDVGNQFTYDEHLYVVNNLIHKSLPVESLPLLGQQIYELCNGPLFTHCTDRYPLSHNVDMAYACDNAGVLPHVKDDLVKCAEGTVYPSEWMVVKYMGFFNFSDCQDLNVLQKEMWMHVRELVLSVALYNETFGKQLSIACLRDELHPDRDVILTYNKEWPLLLRHEGSLYKSKDLYLLLYRHLSRPD

Annotated regions:
Protein sequence:
MAKKLFIETHGCQMNEYDSSRMADLLGEHQALEVTENAAEADVILLNTCSIREKAQEKVFSKLGMWRDLKQQNPDLVIGVGGCVASQEGAAIRERAPYVDVVFGPQTLHRLPEMIDAARSTRKPQVDVSFPEIEKFDRLPEPRVDGPTAFVSVMEGCSKYCSFCVVPYTRGEEVSRPFDDVIAEVIHLAENGVREVTLLGQNVNGFRGQTHDGRLADFAELLRVVAAVDGIERIRYTTSHPLEFSDALIQAHAEVPELVKFIHLPVQSGSDRVLAAMKRNHTVLEYKSRIRKLKAAVPDICISSDFIVGFPGETEKDFEQTMKLVEEVGFDFSFSFIYSARPGTPAADLADDLPEEVKKRRLQILQGRIHQQGYEISRRMVGSTQRILVTDFSKKDPGMLQGRTENNRIVNFRCDNPRLIGQFAQVHIDDALPHSLRGTLIEGTLH

Annotated regions:
phrase: AKKLFIETHGCQMNEYDSSRMADLLGEHQALEVTENAAEADVILLNTCSIREKAQEKVFSKLGMWRDLKQQNPDLVIGVGGCVASQEGAAIRERAPYVDVVFGPQTLHRLPEMIDAARSTRKPQVDVSFPEIEKFDRLPEPRVDGPTAFVSVMEGCSKYCSFCVVPYTRGEEVSRPFDDVIAEVIHLAENGVREVTLLGQNVNGFRGQTHDGRLADFAELLRVVAAVDGIERIRYTTSHPLEFSDALIQAHAEVPELVKFIHLPVQSGSDRVLAAMKRNHTVLEYKSRIRKLKAAVPDICISSDFIVGFPGETEKDFEQTMKLVEEVGFDFSFSFIYSARPGTPAADLADDLPEEVKKRRLQILQGRIHQQGYEISRRMVGSTQRILVTDFSKKDPGMLQGRTENNRIVNFRCDNPRLIGQFAQVHIDDALPHSLRGTLI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: RVDGPTAFVSVMEGCSKYCSFCVVPYTRGEEVSRPFDDVIAEVIHLAENGVREVTLLGQNVNGFRGQTHDGRLADFAELLRVVAAVDGIERIRYTTSHPLEFSDALIQAHAEVPELVKFIHLPVQSGSDRVLAAMKRNHTVLEYKSRIRKLKAAVPDICISSDFIVGFPGETEKDFEQTMKLVEEVGFDFSFSFIYSARPGTPAADLADDLPEEVKKRRLQILQGRIHQQGY
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: PTAFVSVMEGCSKYCSFCVVPYTRGEEVSRPFDDVIAEVIHLAENGVREVTLLGQNVNGFRGQTHDGRLADFAELLRVVAAVDGIERIRYTTSHPLEFSDALIQAHAEVPELVKFIHLPVQSGSDRVLAAMKRNHTVLEYKSRIRKLKAAVPDICISSDFIVGFPGETEKDFEQTMKLVEEVGFDFSFSFIYSARPGTPAADLADDLPEEVKKRRLQILQ
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: VSVMEGCSKYCSFCVVPYTR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: VSVMEGCSKYCSFCVVPYTRGEEVSRPFDDVIAEVIHLAENGVREVTLLGQNVNGFRGQTHDGRLADFAELLRVVAAVDGIERIRYTTSHPLEFSDALIQAHAEVPELVKFIHLPVQSGSDRVLAAMKRNHTVLEYKSRIRKLKAAVPDICISSDFIVGFPGETEKDFEQTMKL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: KKLFIETHGCQMNEYDSSRMADLLGEHQALEVTENAAEADVILLNTCSIREKAQEKVFSKLGMWRDLKQQNPDLVIGVGGCVASQEGAAIRERAPYVDVVFGPQTLHRLPEMIDAAR
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: RRMVGSTQRILVTDFSKKDPGMLQGRTENNRIVNFRCDNPRLIGQFAQVHIDDALPHSLRGTLI
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: KLFIETHGCQMNEYDSSRMADLLGEHQALEVTENAAEADVILLNTCSIREKAQEKVFSKLGMWRDLKQQNPDLVIGVGGCVASQEGAAIRERAPYVDVVF
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: RRMVGSTQRILVTDFSKKDPGMLQGRTENNRIVNFRCDNPRLIGQFAQVHIDDALPHSLRGTL
type: DOMAIN
name: TRAM_dom
description: TRAM domain
Protein sequence:
MAIVGTILFAFYSVAIAAAWFFFGQNQTILAIAIVGSVVLVGVQYKVGKWMALRSVGAEDMDEQEFPRIHRRVESLSRDMGIKKPTLKVANMGVPNAFAVGRKGNGTVVVSRELIDILEHEELDGVLAHELSHIANRDVVTMQLGQGIASIVGIVAQYIVLFSGDNDLADFFLAIVVGNLVQFLVTLFVLAISRYREYVADADARRAIGTGEPLARALEKISQGNEQAAQQQRQRTSRGRGRRQRGQRNDDGLDQQVSALCISSPDTSVLQKLVSTHPPTEKRIQRLRS

Annotated regions:
phrase: QEFPRIHRRVESLSRDMGIKKPTLKVANMGVPNAFAVGRKGNGTVVVSRELIDILEHEELDGVLAHELSHIANRDVVTMQLGQGIASIVGIVAQYIVLFSGDNDLADFFLAIVVGNLVQFLVTLFVLAISRYREYVADADARRAIGTGEPLARALEKISQGNEQAAQQQRQRTSRGRGRRQRGQRNDDGLDQQVSALCISSPDTSVLQKLVSTHPPTEKRIQRL
type: DOMAIN
name: Peptidase_M48
description: Peptidase M48
Protein sequence:
MAHHNGPRKKTRYKFKKELRQRGLPPVTSVIQQFEVGEKVHIVVNSSVQKGMPHRRFHGLTGTVIGKRGRAWMLTIHDGNAEKTVIARPQHLKAQK

Annotated regions:
phrase: GEKVHIVVNSSVQKGMPHRRFHGLT
type: CONSERVED_SITE
name: Ribosomal_eL21_CS
description: Large ribosomal subunit protein eL21, conserved site