Protein sequence:
MGARASVLTGGKLDRWEKVRLRPGGRKRYMMKHLVWASRELERFAKRHHGEQQSKTESNSGSREGGASQGASASAGISGNYPLVQNAQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGALPQDVNTMLNAVGGHQGAMQVLKEVINEEAAEWDRLHPTHAGPIAPGQLREPRGSDIAGTTSTLQEQIGWTTANPPIPVGDVYRRWVILGLNKVVRMYCPVSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTDTLLVQNANPDCKQILKALGPGATLEEMMTACQGVGGPSHKARVLAEAMSMVQNQGRADVFFQKGQGAGPKRKIKCFNCGKEGHLARNCKAPRRKGCWRCGQEGHQMKDCTGRQVNFFRERLAFPQREARQLCAEQNRTNGPTDRELWVPGGREEPGEERGREQSISTNLPQITLWQRPLIPVKVEGQLCEALLDTGADDTVIERIQLQGLWKPKMIGGIGGFIKVKQFDNVHIEIEGRKVVGTVLVGPTPVNIIGRNILTQLGCTLVFPISSIETVPVKLKPGMDGPKVKQWPLSAEKIKALTEICQEMEKEGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSCPLDKDFRKYTAFTIPSINNETPGVRYQYNVLPQGWKGSPSIFQSSMTKILEPFREKNPDITIYQYMDDLYVGSDLEIDQHRKKVEELRQHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKEVWTVNDIQKLIGKLNWASQIYPGIKIKQLCKLIRGTKKLTDVVPLTPEAELELAENREIVSTPVHGVYYDPDKELIAEIQKQGNCQWTYQIFQEPHKNLKTGKYARQRSAHTNDIRQLAEAVQKIATESIVIWGKTPKFRLPVQKESWEAWWAEYWQATWIPEWEFINTPPLVKLWYSLETEPIPTTDTYYVDGAANRETKTGKAGYVTDKGKQKIISLENTTNQQAELKALLLALQDSDQQVNIVTDSQYVLGIIQSQPDHSESELVNQIIEELIKKEKIYLSWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDRAQEEHERYHSNWKAMASDFNLPPIVAKEIVAHCDKCQVKGEAMHGQVDCSPGIWQVDCTHLEGKVIIVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGPNFTSAAVKAACWWADIKQEFGIPYNPQSQGVVESLNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYTAGERIIDIIATDIQTSELQKQILKVQKFRVYYRDSRDPIWKGPATLLWKGEGAVVIQDQGELKVVPRRKAKIIRDYGKQMAGDDCVASRQNED

Annotated regions:
phrase: CPVSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTDTLLVQNANPDCKQILKALGPGATLEEMMT
type: DOMAIN
name: Gag_p24_C
description: Retroviral nucleocapsid Gag protein p24, C-terminal domain

phrase: IKCFNCGKEGHLARNC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: GCWRCGQEGHQMKDC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: SPGIWQVDCTHLEGKVIIVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGPNFTSAAVKAACWWADIKQEFGIPYN
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: IKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSCPLDKDFRKYTAFTIPSINNETPGVRYQYNVLPQGWKGSPSIFQSSMTKILEPFREKNPDITIYQYMDDLYVGSDLEIDQHRKKVEELRQHLLKWGFTTPDKKHQKEPPFLWMGYE
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: FRVYYRDSRDPIWKGPATLLWKGEGAVVIQDQGELKVVPRRKAKIIR
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: CWRCGQEGHQMKD
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: VQPIQLPEKEVWTVNDIQKLIGKLNWASQIYPGIKIKQLCKLIRGTKKLTDVVPLTPEAELE
type: DOMAIN
name: RVT_thumb
description: Reverse transcriptase thumb

phrase: TYYVDGAANRETKTGKAGYVTDKGKQKIISLENTTNQQAELKALLLALQDSDQQVNIVTDSQYVLGIIQSQPDHSESELVNQIIEELIKKEKIYLSWVPAHKGIGGNEQVDKLVSAG
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: IPTTDTYYVDGAANRETKTGKAGYVTDKGKQKIISLENTTNQQAELKALLLALQDSDQQVNIVTDSQYVLGIIQSQPDHSESELVNQIIEELIKKEKIYLSWVPAHKGIGGNEQVDKLVSAGI
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: VDCSPGIWQVDCTHLEGKVIIVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGPNFTSAAVKAACWWADIKQEFGIPYNPQSQGVVESLNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYTAGERIIDI
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: CEALLDTGADDTVIERIQLQGLWKPKMIGGIGGFIKVKQFDNVHIEIEGRKVVGTVLVGPTPVNIIGRN
type: DOMAIN
name: Peptidase_A2_cat
description: Peptidase A2A, retrovirus, catalytic

phrase: EGKISKIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSCPLDKDFRKYTAFTIPSINNETPGVRYQYNVLPQGWKGSPSIFQSSMTKILEPFREKNPDITIYQYMDDLYVGSDLEIDQHRKKVEELRQHLLKWGFTTPDKKHQKEPPFLWMGYE
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: VYYRDSRDPIWKGPATLLWKGEGAVVIQDQGELKVVPRRKAKI
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: WQRPLIPVKVEGQLCEALLDTGADDTVIERIQLQGLWKPKMIGGIGGFIKVKQFDNVHIEIEGRKVVGTVLVGPTPVNIIGRNILTQLGCT
type: DOMAIN
name: Retropepsins
description: Retropepsins

phrase: AQEEHERYHSNWKAMASDFNLPPIVAKEIVAHCDKCQ
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: DGIDRAQEEHERYHSNWKAMASDFNLPPIVAKEIVAHCDKC
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: ALLDTGADDTV
type: ACTIVE_SITE
name: Aspartic_peptidase_AS
description: Aspartic peptidase, active site

phrase: GCWRCGQEGHQMKDCT
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: KCFNCGKEGHLARNCK
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: RASVLTGGKLDRWEKV
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: RPGGRKRYMMKHLVWASR
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: VKVEGQLCEALLDTGADDTVIERIQLQGLWKPKMIGGIGGFIKVKQFDNVHIEIEGRKVVGTVLVGPTPVNIIGRNIL
type: DOMAIN
name: Retropepsin-like_cat_dom
description: Retropepsin-like catalytic domain

phrase: KRHHGEQQSKTESNSGSREGGASQGASASAGISGN
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: GARASVLTGGKLDRWEKVRLRPGGRKRYMMKHLVWASRELERF
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: KCFNCGKEGHLARNC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: YYDPDKELIAEIQKQGNCQWTYQIFQEPHKNLKTGKYARQRSAHTNDIRQLAEAVQKIATESIVIWGKTPKFRLPVQKESWEAWWAEYWQATWIPEWEFIN
type: DOMAIN
name: RVT_connect
description: Reverse transcriptase connection