nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSFTDDQSPVAEQNKKTPSEGHWFAVQVASGCEKRVKLNLEQRIHTLDVADRILQVEIPKTPIVKIRKDGARVQGEEKIFPGYVLIRMIMDDDAWQVVKNTPHVINFVGSEQKRHYGRGRGHVLPMPLSHGEVERIFRHVDEQEPVVKIDMEIGDHIMVLSGPFKDFEGDVIEVSPERSKLKALLSIFGRETPVELEFTQVEKQN

Annotated regions:
phrase: HWFAVQVASGCEKRVKLNLEQRIHTLDVADRILQVEIPKTPIVKIRKDGARVQGEEKIFPGYVLIRMIMDDDAWQVVKNTPHVINFVGSEQKR
type: DOMAIN
name: NGN-like_dom
description: NusG-like, N-terminal

phrase: DMEIGDHIMVLSGPFKDFEGDVIEVSP
type: DOMAIN
name: KOW
description: KOW

phrase: EGHWFAVQVASGCEKRVKLNLEQRIHTLDVADRILQVEIPKTPIVKIRKDGARVQGEEKIFPGYVLIRMIMDDDAWQVVKNTPHVINFVGSEQKRHYGRGRGHVLPMPLSHGEVERIFRH
type: DOMAIN
name: NGN-like_dom
description: NusG-like, N-terminal

phrase: GDHIMVLSGPFKDFEGDVIEVSPER
type: DOMAIN
name: KOW
description: KOW

phrase: HWFAVQVASGCEKRVKLNLEQRIHTLDVADRILQVEIPKTPIVKIRKDGARVQGEEKIFPGYVLIRMIMDDDAWQVVKNTPHVINFVGSEQKRHYGRGRGHVLPMPLSHGEVERIF
type: DOMAIN
name: NGN
description: NusG, N-terminal

phrase: IFGRETPVE
type: CONSERVED_SITE
name: Transcrpt_antiterm_NusG_bac_CS
description: Transcription antitermination protein, NusG, bacteria, conserved site
Protein sequence:
MVTVLRLSSLCRANRASAFKSLLIRPVPCLSQDLHTVQTSQIHTSQNHHAASKAASLHWTSERALSVALLGLLPAAYLYPGAAVDYSLAAALTLHGHWGLGQVVTDYVHGDAKIKLANTSLFALSALTFAGLCYFNYHDVGICKAVAMLWSL

Annotated regions:
Protein sequence:
MPPPSDIVKVAIEWPGANAQLLEIDQKRPLASIIKEVCDGWSLPNPEYYTLRYADGPQLYVTEQTRNDIKNGTILQLAVSPSRAARQLMERTQSSSMETRLDAMKELAKLSADVTFATEFINMDGIIVLTRLVESGTKLLSHYSEMLAFTLTAFLELMDHGIVSWDMVSVTFIKQIAGYVSQPMVDVSILQRSLAILESMVLNSQSLYQKIAEEITVGQLISHLQVSNQEIQTYAIALINALFLKAPEDKRQDKHLNPLDLPVTDMANAFAQKHLRSIILNHVIRGNRPIKTEMAHQLYVLQVLTFNLLEERMMTKMDPNDQAQRDIIFELRRIAFDAESDPSNVPGSGTEKRKAMYTKDYKMLGFTNHINPALDFTQTPPGMLALDNMLYLAKVHQDTYIRIVLENSSREDKHECPFGRSAIELTKMLCEILQVGELPNEGRNDYHPMFFTHDRAFEELFGICIQLLNKTWKEMRATAEDFNKVMQVVREQITRALPSKPNSLDQFKSKLRSLSYSEILRLRQSERMSQDDFQSPPIVELREKIQPEILELIKQQRLNRLCEGSSFRKIGNRRRQERFWHCRLALNHKVLHYGDLDDNPQGEVTFESLQEKIPVADIKAIVTGKDCPHMKEKSALKQNKEVLELAFSILYDPDETLNFIAPNKYEYCIWIDGLSALLGKDMSSELTKSDLDTLLSMEMKLRLLDLENIQIPEAPPPVPKEPSSYDFVYHYG

Annotated regions:
phrase: NLLEERMMTKMDPNDQAQRDIIFELRRIAFDAESDPSNVPGSGTEKRKAMYTKDYKMLGFTNHINPALDFTQTPPGMLALDNMLYLAKVHQDTYIRIVLENSSREDKHECPFGRSAIELTKMLCEILQVGELPNEGRNDYHPMFFTHDRAFEELFGICIQLLNKTWKEMRATAEDFNKV
type: DOMAIN
name: ELMO_dom
description: ELMO domain

phrase: TFATEFINMDGIIVLTRLVESGTKLLSHYSEMLAFTLTAFLELMDHGIVSWDMVSVTFIKQIAGYVSQPMVDVSILQRSLAILESMVLNSQSLYQKIAEEITVGQLISHLQVSNQEIQTYAIALINALFLKAPEDKRQDKHLNPLDLPVTDMANAFAQKHLRSIILNHV
type: DOMAIN
name: ELMO_ARM
description: ELMO, armadillo-like helical domain

phrase: IKQQRLNRLCEGSSFRKIGNRRRQERFWHCRLALNHKVLHYGDLDDNPQGEVTFESLQEKIPVADIKAIVTGKDCPHMKEKSALKQNKEVLELAFSILYDPDETLNFIAPNKYEYCIWIDGLSALL
type: DOMAIN
name: PH_domain
description: Pleckstrin homology domain

phrase: AQRDIIFELRRIAFDAESDPSNVPGSGTEKRKAMYTKDYKMLGFTNHINPALDFTQTPPGMLALDNMLYLAKVHQDTYIRIVLENSSREDKHECPFGRSAIELTKMLCEILQVGELPNEGRNDYHPMFFTHDRAFEELFGICIQLLNKTWKEMRATAEDFNKVMQVVREQITRA
type: DOMAIN
name: ELMO_dom
description: ELMO domain
Protein sequence:
MMCEVMPTISEAEGPPGGGGGHGSGSPSQPDADSHFEQLMVSMLEERDRLLDTLRETQETLALTQGKLHEVGHERDSLQRQLNTALPQEFAALTKELNVCREQLLEREEEIAELKAERNNTRLLLEHLECLVSRHERSLRMTVVKRQAQSPAGVSSEVEVLKALKSLFEHHKALDEKVRERLRVALERCSLLEEELGATHKELMILKEQNNQKKTLTDGVLDINHEQENTPSTSGKRSSDGSLSHEEDLAKVIELQEIISKQSREQSQMKERLASLSSHVTELEEDLDTARKDLIKSEEMNTKLQRDVREAMAQKEDMEERITTLEKRYLAAQREATSVHDLNDKLENEIANKDSMHRQTEDKNRQLQERLELAEQKLQQTLRKAETLPEVEAELAQRVAALSKAEERHGNIEERLRQMEAQLEEKNQELQRARQREKMNEEHNKRLSDTVDKLLSESNERLQLHLKERMAALEDKNSLLREVESAKKQLEETQHDKDQLVLNIEALRAELDHMRLRGASLHHGRPHLGSVPDFRFPMADGHTDSYSTSAVLRRPQKGRLAALRDEPSKVQTLNEQDWERAQQASVLANVAQAFESDADVSDGEDDRDTLLSSVDLLSPSGQADAHTLAMMLQEQLDAINKEIRLIQEEKENTEQRAEEIESRVGSGSLDNLGRFRSMSSIPPYPASSLASSSPPGSGRSTPRRIPHSPAREVDRLGVMTLLPPSREEVRDDKTTIKCETSPPSSPRALRLDRLHKGALHTVSHEDIRDIRNSTGSQDGPVSNPSSSNSSQDSLHKAPKKKGIKSSIGRLFGKKEKGRPGQTGKEALGQAGVSETDNSSQDALGLSKLGGQAEKNRKLQKKHELLEEARRQGLPFAQWDGPTVVVWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEIMSLTSPSAPPTSRTTLAYGDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRGQLKMVDSFHRNSFQCGIMCLRRLNYDRKELERKREESQSEIKDVLVWSNDRVIRWILSIGLKEYANNLIESGVHGALLALDETFDFSALALLLQIPTQNTQARAVLEREFNNLLVMGTDRRFDEDDDKSFRRAPSWRKKFRPKDIRGLAAGSAETLPANFRVTSSMSSPSMQPKKMQMDGNVSGTQRLDSATVRTYSC

Annotated regions:
phrase: EWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRGQLKMVDSFHRNSFQCGIMCLRR
type: DOMAIN
name: SAM
description: Sterile alpha motif domain

phrase: MNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRGQLKMVDSFHRNSFQCGIMCLRR
type: DOMAIN
name: Liprin-alpha_SAM_rpt_2
description: Liprin-alpha, SAM domain repeat 2

phrase: VLVWSNDRVIRWILSIGLKEYANNLIESGVHGALLALDETFDFSALALLLQIPTQNTQA
type: DOMAIN
name: SAM
description: Sterile alpha motif domain

phrase: WDGPTVVVWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEIMS
type: DOMAIN
name: SAM
description: Sterile alpha motif domain

phrase: FAQWDGPTVVVWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEIMS
type: DOMAIN
name: SAM
description: Sterile alpha motif domain

phrase: GDMNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRGQLKMVDSFHRNSFQCGIMCLRR
type: DOMAIN
name: SAM
description: Sterile alpha motif domain

phrase: VLVWSNDRVIRWILSIGLKEYANNLIESGVHGALLALDETFDFSALALLLQIPTQNTQARAVLEREFNNLLV
type: DOMAIN
name: SAM
description: Sterile alpha motif domain

phrase: FAQWDGPTVVVWLELWVGMPAWYVAACRANVKSGAIMSALSDTEIQREIGISNPLHRLKLRLAIQEIMSL
type: DOMAIN
name: Liprin-alpha_SAM_rpt_1
description: Liprin-alpha, SAM domain repeat 1

phrase: MNHEWIGNEWLPSLGLPQYRSYFMECLVDARMLDHLTKKDLRGQLKMVDSFHRNSFQCGIMCL
type: DOMAIN
name: SAM
description: Sterile alpha motif domain

phrase: DVLVWSNDRVIRWILSIGLKEYANNLIESGVHGALLALDETFDFSALALLLQIPTQNTQARAVLEREFNNL
type: DOMAIN
name: Liprin-alpha_SAM_rpt_3
description: Liprin-alpha, SAM domain repeat 3

phrase: WSNDRVIRWILSIGLKEYANNLIESGVHGALLALDETFDFSALALLLQIPTQNTQARAVLEREFNNLLV
type: DOMAIN
name: SAM
description: Sterile alpha motif domain
Protein sequence:
MPALSQALTQLRNGGMVILVDDEDRENEGDLVIAAEFATPEAINFMARHGRGLICLALTGEQVDRLGLPPMVANNRARRSTAFTVSIEAVDGITTGISAHDRARTIQVAAAPDVRSGDIASPGHVFPLRAADNGVLARDGHTEGAIDLMRLAGLRPAGVICEVMRDDGEMARRPDLEVFAREHKLPILTIRDIIAHRLANETLVDEVARSELPTEHSPLPLEVRAFRSRLDGTEHLALLRSPLGRTPLVRLHSECLTGDALGSLRCDCGPQLQEALRQIATGDGGALIYLRGQEGRGIGLANKIRAYALQDLGHDTVEANTALGFVADARDYGIAGQILRSLGIDRLRLLSNNPDKALSLEKFGIHVAERVPLEIPANPYNWRYLATKRDKFGHTFTHQDHENQNA

Annotated regions:
phrase: ARSELPTEHSPLPLEVRAFRSRLDGTEHLALLRSPLGRTPLVRLHSECLTGDALGSLRCDCGPQLQEALRQIATGDGGALIYLRGQEGRGIGLANKIRAYALQDLGHDTVEANTALGFVADARDYGIAGQILRSLGIDRLRLLSNNPDKALSLEKFGIHVAERV
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MPRSLKKGPFVDEHLLNKVDAQNEKGTKQVIKTWSRRSTILPDFIGHTFAVHDGRKHVPVFVDDAMVGHKLGEFAPTKTFKGHVKDDKKGRR

Annotated regions:
phrase: DGRKHVPVFVDDAMVGHKLGEFAP
type: CONSERVED_SITE
name: Ribosomal_uS19_CS
description: Small ribosomal subunit protein uS19, conserved site
Protein sequence:
MLKQVEIFTDGSCLGNPGPGGYGAILRYRGHEKTFSAGYTRTTNNRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLEDTGYQVEV

Annotated regions:
phrase: MLKQVEIFTDGSCLGNPGPGGYGAILRYRGHEKTFSAGYTRTTNNRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAA
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: KQVEIFTDGSCLGNPGPGGYGAILRYRGHEKTFSAGYTRTTNNRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVDLWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAA
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain
Protein sequence:
MTTMIGQTRQAGSSSYEQAWQAEQAPCPGMEPDTLTVGVVVVTRNPTFFQTGLSVLNDIRDYVFNRVHIQSELPLKLSELASDPLYSEAREKAIHFLKNQSKALNIQVIQCASLAEATGKIIYTHALEQQPEFQMGMLFYDQTSLGNVDDSIEKIDRDLDAFYSAMQRGGIPAFYTTFSTVTFIRDVRSSFRYLPQQYREIVRSEDPAIFQTELLCLWMDFFEMNYTNRRVKPIGALALHNTLAEQLIQFFERTAASRWLVSYYTGSIISNLIGYLDRHAEAHGALVLRGPNEHAIACGAMANWQLYRMPFLGVVTSGMMDEFKGTLINLKETAAQGIIVAAENRNNQWYSFQGTQTPTEDMRDVLAAKRIPYVYIDDVDGIADGLAEVFRLYHQAQGPVVILATQNVLESTLSLEPVPGDLPPVSGLPAYDCPPISDSFEQAMALINEGPEKLVWQLGPVSDDEYALVHEIADAAGLALVDSLAHPGSAPKYYQGKRNPHYLGTLAIYGYSPRVYNFLHTNDKLNPMSDQSVFMIKSRVAQITTPFSDGRLERKVHLVQLTHDERHLSPYADLKLHMDCLTFLRAVKANLHVDAALREKRKALIAAYLDSPSDVVSQLPSLPMSANYFFCQLNRVIENLIKTENFDFTGVYDVGRCGISAVRNVAKTRRGFSGWYGRALMGDALLATSYLAHTSPTHVVAFIGDGAKGIVPDILPAFIDNILTHPQLLNKSITIFYFCNGGLSVINTYQERILFNRTSRQMRLVNVDQPAFEQTVDDFHIQGKTLTHFDEDTIRHALMTPKRLNLFSVVLGHNNEGDGISLATAKGWQRDPSDREALQERKDWAARQPESTSTSFDQGQNKEAIS

Annotated regions:
Protein sequence:
MASDNSQTQTRTKKPRKKRKTYSCGVCRKFKTRCDFEPLVGKCHRCNVLRLECSLTKEREEEILAAVESTSKSTLAPASLVSGQLPALAAANPVVANDAVVVAPVAATLSSRLNKLESSVGSLNSKLDLALMLLQGSNSAISNLKNLTSSKAGMGDRNATYDDDDDGDDDGHDHSDSDNFVNGIKLQEPPLKLISDIDERLFPTKAQSQQDILAKTQRPFVVARFNFLKYFNQHEQLCLDLSRDFLVKSHFWIIPGGIKEINRTYVEKHLFITSVFTIIAMGFDENNKYEKEQEQLYPLVERFLTNTLTMFEKLTDHDIEAILYCSMFNISRKSKRHRQLKFNSLVLCNFAVNSVLNIVDFHKIKERVLINEEYSALDLYHLRILNSLTACRLQYSIGSGNFTIQDDMLKEFNNLTAKFPQANFGDDIKISEINLGDIVNGIFLNFKAYFKGFSKRFRAETRGHADRNRDCLVIPELEYWLKNWDELLSKDGGGVLLFAYDFYYSMICRSFLTEFFEEEFQNDVVYFKCALKTMKRYCFSLLDGFLKLPPSLIKGAPTITLHQLVYACLTLCDFLHCFDVAERQQVLNLCTKIYWHLNTIGEKLNEATDNVGKIIKSLIDTSKRKAQVSGRLAVPRNTKRGSPSMTPGFQQSVQSSSALQGSKAGSPQSARSVNSQGSGADSLAAASFNMPDVAQFNSFEDFFQDFFDNLKPTTQSMFSTLQQQQQ

Annotated regions:
phrase: KRKTYSCGVCRKFKTRCDFEPLVGKCHRCNVLRLECSLTKEREEEI
type: DOMAIN
name: Zn2Cys6_DnaBD
description: Zn(2)Cys(6) fungal-type DNA-binding domain

phrase: SCGVCRKFKTRCDFEPLVGKCHRCNVLRLE
type: DOMAIN
name: Zn2Cys6_DnaBD
description: Zn(2)Cys(6) fungal-type DNA-binding domain

phrase: SCGVCRKFKTRCDFEPLVGKCHRCNVLRLEC
type: DOMAIN
name: Zn2Cys6_DnaBD
description: Zn(2)Cys(6) fungal-type DNA-binding domain
Protein sequence:
MKLVIVSGRSGSGKSVALRVLEDLGYYCVDNLPLPLIGTLLEQLKGSNDLVAISVDVRNLPEQDKVLVKQLASLPPDTELTSFFLNSSDKILLKRYSETRRLHPLSKSQVSLQEAIKLEGKLLEPMSKLVDHYIDTSNLNIYDLSDQVRQILLGSVDKELVINFESFGFKHGMPTEADFMFDVRFLPNPHWELALRPLTGLDEPVAEFLNRQPLVNKFIWQIENLLETWLPHLERNNRSYLTVAIGCTGGQHRSVYVAEQLAKRFSNGKHKVYARHRELNNAKA

Annotated regions:
phrase: MKLVIVSGRSGSGKSVALRVLEDLGYYCVDNLPLPLIGTLLEQLKGSNDLVAISVDVRNLPEQDKVLVKQLASLPPDTELTSFFLNSSDKILLKRYSETRRLHPLSKSQVSLQEAIKLEGKLLEPMSKLVDHYIDTSNLNIYDLSDQVRQILL
type: DOMAIN
name: RapZ-like_N
description: RapZ-like, N-terminal domain

phrase: VINFESFGFKHGMPTEADFMFDVRFLPNPHWELALRPLTGLDEPVAEFLNRQPLVNKFIWQIENLLETWLPHLERNNRSYLTVAIGCTGGQHRSVYVAEQLAKRFSNGKHKVYARHRE
type: DOMAIN
name: RapZ_C
description: RapZ, C-terminal domain
Protein sequence:
MTNHIAGGGNPPGPEGDASAGIDVVLVTGLSGAGRGTAAKVLEDLGWYVADNLPPQLITRMVDFGLAAGSRITQLAVVMDVRSRGFTGDLDSVRNELATRNITPRVVFMEASDDMLVRRYEQNRRSHPLQGGHTLAEGIAAERKMLEPVRATADLIIDTSTLSVRGLRENIERAFGGDAAAITSVTVESFGFKYGLPMDADMVMDVRFLPNPHWVDELRPLTGQHQAVSDYVLGRPGASEFLQTYHELLSLVVEGYRREGKRYMTVAIGCTGGKHRSVAIAEALVGLLRSNSRLSVRVLHRDLGRE

Annotated regions:
phrase: IDVVLVTGLSGAGRGTAAKVLEDLGWYVADNLPPQLITRMVDFGLAAGSRITQLAVVMDVRSRGFTGDLDSVRNELATRNITPRVVFMEASDDMLVRRYEQNRRSHPLQGGHTLAEGIAAERKMLEPVRATADLIIDTSTLSVRGLRENIERAFGG
type: DOMAIN
name: RapZ-like_N
description: RapZ-like, N-terminal domain

phrase: SVTVESFGFKYGLPMDADMVMDVRFLPNPHWVDELRPLTGQHQAVSDYVLGRPGASEFLQTYHELLSLVVEGYRREGKRYMTVAIGCTGGKHRSVAIAEALVGLLRSNSRLSVRVLHRD
type: DOMAIN
name: RapZ_C
description: RapZ, C-terminal domain
Protein sequence:
MKVIISGGGTGGHVYPGIAIADVLKQKNAENQILFVGAGGKMEMSQVPAAGYPIVGLPIRGINRKLKYIWKNLALPIWVLISLWKVKRIIKDFKPNVVIGTGGYAGFPTIYMAARMHIPIVLQEQNAYAGVANRLLAKYAHKICVAYEGMDAYFPSNKVVLTGNPVRAFLTDKADNYLPSLQYFGLEPGIITVLVLGGSLGAQAISESIIKAAHIFEKHTIQVILSTGNAYFSTIQQADFPAFNKNFKILPYIERMDLAFAAANIVVSRAGAISIAEIASAQKPAIFIPSPNVTADHQMKNVLPLVTKNAAILIKDNEVPDKLVPAILELAKDKQRQRMLVENLSSCFKTHAAESIASLIEDLV

Annotated regions:
phrase: TVLVLGGSLGAQAISESIIKAAHIFEKHTIQVILSTGNAYFSTIQQADFPAFNKNFKILPYIERMDLAFAAANIVVSRAGAISIAEIASAQKPAIFIPSPNVTADHQMKNVLPLVTKNAAILIKDNEVPDKLVPAILELAKDKQRQRMLVEN
type: DOMAIN
name: Glyco_trans_28_C
description: Glycosyl transferase, family 28, C-terminal

phrase: VIISGGGTGGHVYPGIAIADVLKQKNAENQILFVGAGGKMEMSQVPAAGYPIVGLPIRGINRKLKYIWKNLALPIWVLISLWKVKRIIKDFKPNVVIGTGGYAGFPTIYMAARMHIPIVLQEQNAYAGVANRLLAKYAHKI
type: DOMAIN
name: GlycoTrans_28_N
description: Glycosyltransferase family 28, N-terminal domain
Protein sequence:
MALNIRKTHPLLKIVNQTLIDLPAPSNISIWWNFGSLLGLCLIIQIVTGLFLAMHYTADISLAFSSVIHICRDVNYGWLIRNIHANGASLFFVCVYIHIARGLYYGSYLYKETWNIGVILLFLLMATAFVGYVLPWGQMSFWGATVITNLLSAFPYIGDTLVQWIWGGFSVDNATLTRFFAFHFLLPFLITALMVIHVLFLHETGSNNPMGLNSDMDKISFHPYFSYKDALGFLTLLILLGALALFLPNLLGDAENFIPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILLLVPLLHTSKQRSSTFRPLTQVFFWILVTNMLVLTWIGGQPVEQPFILIGQIASITYFSLFLIAMPLAGWWENKILSLN

Annotated regions:
phrase: PLLKIVNQTLIDLPAPSNISIWWNFGSLLGLCLIIQIVTGLFLAMHYTADISLAFSSVIHICRDVNYGWLIRNIHANGASLFFVCVYIHIARGLYYGSYLYKETWNIGVILLFLLMATAFVGYVLPWGQMSFWGATVITNLLSAFPYIGDTLVQWIWGGFSVDNATLTRFFAFHFLLPFLITALMVIHVLFLHETGS
type: DOMAIN
name: Cytochrome_b_N_euk/bac
description: Cytochrome b/b6, N-terminal domain, eukaryotic/bacterial

phrase: PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILLLVPLLHTSKQRSSTFRPLTQVFFWILVTNMLVLTWIGGQPVEQPFILIGQIASITY
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: IDLPAPSNISIWWNFGSLLGLCLIIQIVTGLFLAMHYTADISLAFSSVIHICRDVNYGWLIRNIHANGASLFFVCVYIHIARGLYYGSYLYKETWNIGVILLFLLMATAFVGYVLPWGQMSFWGATVITNLLSAFPYIGDTLVQWIWGGFSVDNATLTRFFAFHFLLPFLITALMVIHVLFLHET
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: GLNSDMDKISFHPYFSYKDALGFLTLLILLGALALFLPNLLGDAENFIPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILLLVPLLHTSKQRSSTFRPLTQVFFWILVTNMLVLTWIGGQPVEQPFILIGQIASITYFSLFLIAMPLAGWWENKILSL
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: NPMGLNSDMDKISFHPYFSYKDALGFLTLLILLGALALFLPNLLGDAENFIPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILLLVPLLHTSKQRSSTFRPLTQVFFWILVTNMLVLTWIGGQPVEQPFILIGQI
type: DOMAIN
name: Cytochrome_b_C_euk/bac
description: Cytochrome b/b6, C-terminal domain, eukaryotic/bacterial

phrase: MALNIRKTHPLLKIVNQTLIDLPAPSNISIWWNFGSLLGLCLIIQIVTGLFLAMHYTADISLAFSSVIHICRDVNYGWLIRNIHANGASLFFVCVYIHIARGLYYGSYLYKETWNIGVILLFLLMATAFVGYVLPWGQMSFWGATVITNLLSAFPYIGDTLVQWIWGGFSVDNATLTRFFAFHFLLPFLITALMVIHVLFLHETGSNNP
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain
Protein sequence:
MTKIKQEIYNKRPTSPHLTIYKPQISSTLSILHRMTGVALFFVVSILVWWLILSKYDNNYLQLASCCIIKICLVAFSYSWCYHLCNGIRHLFWDIGYGFSIKAVNITGWCVVVCSILLTMLLWV

Annotated regions:
phrase: HLCNGIRHLFWDI
type: CONSERVED_SITE
name: Succ_DH_cyt_bsu_CS
description: Succinate dehydrogenase, cytochrome b subunit, conserved site

phrase: RPTSPHLTIYKPQISSTLSILHRM
type: CONSERVED_SITE
name: Succ_DH_cyt_bsu_CS
description: Succinate dehydrogenase, cytochrome b subunit, conserved site
Protein sequence:
MLYYSGPVARLVDEFAKLPGIGPKTAQRLAFHVLNSPPELAQGLAKALVEVRQSIKRCSLCCNLTDEDPCSICQDTTRNSNLLCVVEEPRDVIAMEKARGYRGYYHVLHGAISPMEGIRPEDLTIKELLHRLQNGDIQEVILAANSDVEGETTALYLARLLKPLGVKVTRIAHGIPVGSDLEYADAMTLNKALEGRGEFG

Annotated regions:
phrase: IKRCSLCCNLTDEDPCSICQ
type: DOMAIN
name: Rcmb_RecR_Znf
description: Recombination protein RecR, zinc finger domain

phrase: NLLCVVEEPRDVIAMEKARGYRGYYHVLHGAISPMEGIRPEDLTIKELLHRLQNGDIQEVILAANSDVEGETTALYLARLLKPLGVKVTRIAHGI
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: LLCVVEEPRDVIAMEKARGYRGYYHVLHGAISPMEGIRPEDLTIKELLHRLQNGDIQEVILAANSDVEGETTALYLARLLKPLGVKVTRI
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: NLLCVVEEPRDVIAMEKARGYRGYYHVLHGAISPMEGIRPEDLTIKELLHRLQNGDIQEVILAANSDVEGETTALYLARLLKPLGVKVTRIAHGIPVGSDLEYADAMTLNK
type: DOMAIN
name: TOPRIM_RecR
description: RecR, TOPRIM domain

phrase: DEFAKLPGIGPKTAQRLAF
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: NLLCVVEEPRDVIAMEKARGYRGYYHVLHGAISPMEGIRPEDLTIKELLHRLQNGDIQEVILAANSDVEGETTALYLARLLKPLG
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: CSLCCNLTDEDPCSICQDTTR
type: DOMAIN
name: Rcmb_RecR_Znf
description: Recombination protein RecR, zinc finger domain
Protein sequence:
MTTKTVIKTKSYKLYDFNVYDGFSKAENLGKNGYDKFKDNKKFIIQMFGINTAGQTASIIVEDFNPFYYIKVGDDWTESDRCEFVSHIKGKLGVYYEDSIVASKLVKRHKLYGFDDNKLHTFIKISFTNTGAYNRAKKMFYIDSNVDGVFKRELLPDGYLYEETKCYLYEANIPPLLKLFHIQEISPSGWVQIQTDKITKMRQKSTHCAYEYITSYKHLKKADKDDIVKYSICSFDIEASSSHGDFPVPIKDYKKLATNILEYYNEMEDKTKFDVTCFKKHINAGYGYERCPDIATVYPKLKNISNEQLDNIFSNFMLYIPAKDQSRKDYIKENEESDSESDNDDEEDKKENDGADEAAAFHKRHKKVKKYNKTANILQIIQDDKCEHDTKLFELNKALTKFYPELEGDMVTFIGMTFLNYSDKKPHTRYIIVKGGCEVPEKYKSWVLENNVKIIEKTTEKGVLLEFTKIMTLENPHIVTGYNINGFDFDFMFKRSKEIGCTEDFLKLSKNIDEVCMTKDWKTGEMEIAKNKIVLASGEYNLSFVNMPGRIIVDMCVVFRREYTLSSNKLDYVSSYFISDSVKKIDVDKENNQTRIYSKNLTGLTVGCYVKFDEVSHSTNNYKKGQKFEILDINLDTASFLIDSAEELDLKKYKINWGLAKDDVSVQEIFELANKSDIDRFTVGKYCLGDCDNVIWLLIKVDIITDKVEMSNLCDVPLNFLLQRGQGIKLQSYVSKKCGEKNTLMPIVEKNLNDGGYEGAHVFNPKTGLYLEDPVACVDYSSLYPSSMISENLSHDSKVWTKEYDLSNNLIHSTGEKDADENFIYDNLPNYTYVDVKYDTYEYLRKTPKAAEKKTVVGYKICRFAQFPKGKAIMPAILEDLLSARKATKKLMGKEEDPFKQNIYDKRQLSIKVTANSLYGQCGARTSAFYEKDVAASCTAIGRKLLFYGKDVIEGCYNNVEITLSDGVKVVTKAECVYGDTDSVFFKFNLKTPEGKRIINKQALIYTIELAKQAGELATKFLKKPTRFRVRENILAFQSIIQEKI

Annotated regions:
phrase: KFYPELEGDMVTFIGMTFLNYSDKKPHTRYIIVKGGCEVPEKYKSWVLENNVKIIEKTTEKGVLLEFTKIMTLENPHIVTGYNINGFDFDFMFKRSKEIGCTEDFLKLSKNIDEVCMTKDWKTGEMEIAKNKIVLASGEYNLSFVNMPGRIIVDMCVVFRREYTLSSNKLDY
type: DOMAIN
name: DNA-dir_DNA_pol_B_exonuc
description: DNA-directed DNA polymerase, family B, exonuclease domain

phrase: LYEANIPPLLKLFHIQEISPSGWVQIQTDKITKMRQKSTHCAYEYITSYKHLKKADKDDIVKYSICSFDIEASSSHGDFPVPIK
type: DOMAIN
name: DNA-dir_DNA_pol_B_exonuc
description: DNA-directed DNA polymerase, family B, exonuclease domain

phrase: VPLNFLLQRGQGIKLQSYVSKKCGEKNTLMPIVEKNLNDGGYEGAHVFNPKTGLYLEDPVACVDYSSLYPSSMISENLSHDSKVWTKEYDLSNNLIHSTGEKDADENFIYDNLPNYTYVDVKYDTYEYLRKTPKAAEKKTVVGYKICRFAQFPKGKAIMPAILEDLLSARKATKKLMGKEEDPFKQNIYDKRQLSIKVTANSLYGQCGARTSAFYEKDVAASCTAIGRKLLFYGKDVIEGCYNNVEITLSDGVKVVTKAECVYGDTDSVFFKFNLKTPEG
type: DOMAIN
name: DNA-dir_DNA_pol_B_multi_dom
description: DNA-directed DNA polymerase, family B, multifunctional domain
Protein sequence:
MNAKTLDAIKPFLDWIPLIVFFYIYKTTEGEGSEHIIAATTGLLIATLIVYGLMFVLQKFTLEKRQWLVVVLTVVFGGLTMAFQDDFYIRLKAPIINAVFAFGLAMSPLFLGGTPGIQKMLGPIFEMTPKQWMKLNWVWVGFFTLMAVLQALFAFVWVEYWAMFTAFGDMIVMVVFMVAQFWFLRGFMRKDIK

Annotated regions:
Protein sequence:
MLNSSMSVVILAAGKGTRMYSDLPKVLHTLAGKAMVQHVIDAANNLGARHVHLVYGHGGDLLKQTLRYDNLNWVLQAEQLGTGHAMQQAAPGFADDEDILMLYGDVPLISVETLQRLRDAKPQGGIGLLTVNLDDPTGYGRITRQDGKVTGIVEHKDATPEQHKIQEINTGILIANGADLKRWLSKLTNDNAQGEYYITDIIELAYLEGREIAAVHPQRLSEVEGVNNRLQLSRLERVYQSEQAEKLLLAGVMLRDPARFDLRGTLSHGRDIEIDTNVILEGNVTLGSRVKIGTGCVIKNSVIGDDCEISPYSVVEDATLEAACTIGPFARLRPGAELLAGAHVGNFVEMKKARLGKGSKAGHLTYLGDAEIGDNVNIGAGTITCNYDGANKHKTIIGDDVFVGSDSQFIAPVSVASGVTIAAGTTVTRDVAEDELVISRVKQTHIKGWKRPVKKK

Annotated regions:
phrase: GVMLRDPARFDLRGTLSHGRDIEIDTNVILEGNVTLGSRVKIGTGCVIKNSVIGDDCEISPYSVVEDATLEAACTIGPFARLRPGAELLAGAHVGNFVEMKKARLGKGSKAGHLTYLGDAEIGDNVNIGAGTITCNYDGANKHKTIIGDDVFVGSDSQFIAPVSVASGVTIAAGTTVTRDVAEDELVISRVK
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain

phrase: TIIGDDVFVGSDSQFIAPVSVASGVTIAAGTTVT
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: VVILAAGKGTRMYSDLPKVLHTLAGKAMVQHVIDAANNLGARHVHLVYGHGGDLLKQTLRYDNLNWVLQAEQLGTGHAMQQAAPGFADDEDILMLYGDVPLISVETLQRLRD
type: DOMAIN
name: MobA-like_NTP_Trfase
description: MobA-like NTP transferase
Protein sequence:
MLHTTPSGLLIIDKPQGVTSFDAVAAVRGALHIKKVGHAGTLDPMATGTLVIAFGHATRLLNAIVAHDKTYEATIRLGLRTTTDDAEGEVLVDDEARSRWQTLSAQLTEGGQSGEPTALPTASWQDLLTRTIATNFTGDIEQVPNTFSAIKINGQRAYDLAREGKDVELKPRPVTISEFTVLDIRSGFVAGEQTAEPLREDANTGAIPALDVDVRISCSSGTYIRALARDLGKELGVGGYLTRLRRTRVGRFALPDDASGLIAPEAMLDTRTHTVTAHTDQKTFTNREGQTVTRNKCVLDTPEGLAGDERRNWLLDHALTMEQAARGAMPALDITPEEASELRFGRRIERTISEPTAAIVPQTHDVAAIIERANAHQAKPVTVFPLA

Annotated regions:
phrase: SGEPTALPTASWQDLLTRTIATNFTGDIEQVPNTFSAIKINGQRAYDLAREGKDVELKPRPVTISEFTVLDIRSGFVAGEQTAEPLREDANTGAIPALDVDVRISCSSGTY
type: DOMAIN
name: PsdUridine_synth_N
description: Pseudouridine synthase II, N-terminal

phrase: GALHIKKVGHAGTLDPMATGTLVIAFGHATRLLNAIVAHDKTYEATIRLGLRTTTDDAEGEVLVD
type: DOMAIN
name: PsdUridine_synth_N
description: Pseudouridine synthase II, N-terminal

phrase: RALARDLGKELGVGGYLTRLRRTRVGRFALP
type: DOMAIN
name: TruB_C
description: tRNA pseudouridylate synthase B, C-terminal

phrase: MPALDITPEEASELRFGRRIERTISEPTAAIVPQTHDVAAIIERANAHQAKPVTVF
type: DOMAIN
name: tRNA_psdUridine_synth_fam2_C
description: tRNA pseudouridine synthase II, TruB, subfamily 2, C-terminal
Protein sequence:
MDTEGSSEQGKQTKEQVCSSLWPEGYPAAETVTSSVDMNTQPYRNLSGVRVGRPKLSLQGVQRGRPHSRRRHRTTFSPAQLEQLESAFGRNQYPDIWARESLAQDTGLSEARIQVWFQNRRAKQRKQERSLLQPLAHLSPATFSGFLPEPPSCPYSYPTPPPPMTCFPHPYNRALPSQPSTGSSFARPYQSEDWYPNLHPTPAGHLACPPPPPMLPLSLEPPKSWN

Annotated regions:
phrase: RRHRTTFSPAQLEQLESAFGRNQYPDIWARESLAQDTGLSEARIQVWFQNRRAKQRKQ
type: DOMAIN
name: HD
description: Homeodomain

phrase: RRRHRTTFSPAQLEQLESAFGRNQYPDIWARESLAQDTGLSEARIQVWFQNRRAKQRKQERS
type: DOMAIN
name: HD
description: Homeodomain

phrase: LAQDTGLSEARIQVWFQNRRAKQ
type: CONSERVED_SITE
name: Homeobox_CS
description: Homeobox, conserved site

phrase: RRHRTTFSPAQLEQLESAFGRNQYPDIWARESLAQDTGLSEARIQVWFQNRRAKQR
type: DOMAIN
name: HD
description: Homeodomain

phrase: ARESLAQDT
type: CONSERVED_SITE
name: HTH_motif
description: Helix-turn-helix motif

phrase: GLSEARIQVWFQNRRA
type: CONSERVED_SITE
name: HTH_motif
description: Helix-turn-helix motif

phrase: HSRRRHRTTFSPAQLEQLESAFGRNQYPDIWARESLAQDTGLSEARIQVWFQNRRAKQRK
type: DOMAIN
name: HD
description: Homeodomain
Protein sequence:
MTTLRLLISDSYDPWFNLAVEECIFRQMPATQRVLFLWRNADTVVIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFMAGKPEYDKTISTHIVLAALNSLGVMADASGRNDLVVKTPDGDRKVSGSAYRETKDRGFHHGTLLLNADLSRLAIYLNPDKKKLAAKGITSVRSRVANLTELLPGITHKQVCQAVTEAFFVHYGERVDAEVISPDKTPDLPNFAETFARQSSWEWNFGQAPAFSHLLDERFTWGGVELHFDVEKGVITRAQVFTDSLNPAPLEALAERLQGCLYRADKLQETCEALLVDFPEQEKELRELSAWIAEAVR

Annotated regions:
phrase: DPWFNLAVEECIFRQMPATQRVLFLWRNADTVVIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFMAGKPEYDKTISTHIVLAALNSLGVMADASGRNDLVVKTPDGDRKVSGSAYRETKDRGFHHGTLLLNADLSRLAIYLNPDKKKLAAKGITSVRSRVANLTELLPGITHKQVCQAVTEA
type: DOMAIN
name: BPL_LPL_catalytic
description: Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain

phrase: PAFSHLLDERFTWGGVELHFDVEKGVITRAQVFTDSLNPAPLEALAERLQGCLYRADKLQETCEALLVDFPEQEKELRELSAW
type: DOMAIN
name: Lipoate_protein_ligase_C
description: Lipoate protein ligase, C-terminal

phrase: PATQRVLFLWRNADTVVIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFMAGKPEYDKTISTHIVLAALNSLGVMADASGRNDLVVKTPDGDRKVSGSAYRETKDRGFHHGTLLLNADLSRLAIYLNPDKKKLAAKGITSVRSRVANLTELLPGITHKQVCQAVTEAFFVHYGER
type: DOMAIN
name: BPL_LPL_catalytic
description: Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain
Protein sequence:
MQLEEGVKLVEIFTDGACKGNPGIGGWGVCLKFDGEVREFFGGEPVTTNNRMELLAAIRALQALESLPDTGQSLRVQLHTDSQYVQKGISEWVHSWKKRGWLTADKKPVKNEALWKELDQLSRRYQVEWFWVRGHNGHDGNERADMLANRGVVSVLSEKAD

Annotated regions:
phrase: GVKLVEIFTDGACKGNPGIGGWGVCLKFDGEVREFFGGEPVTTNNRMELLAAIRALQALESLPDTGQSLRVQLHTDSQYVQKGISEWVHSWKKRGWLTADKKPVKNEALWKELDQLSRRYQVEWFWVRGHNGHDGNERADMLANRGV
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: VEIFTDGACKGNPGIGGWGVCLKFDGEVREFFGGEPVTTNNRMELLAAIRALQALESLPDTGQSLRVQLHTDSQYVQKGISEWVHSWKKRGWLTADKKPVKNEALWKELDQLSRRYQVEWFWVRGHNGHDGNERADMLANRG
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain