nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTCPNNQAGNSFFVDSLINVRPDSGSYYQSNGVYLPPGSEFSYGLSGGSCFPGIGKRNEPSAQSVISSPAPYVQGMETWLEASRPCRVDQPRGQHMAQCSFSPNIKEESTYCLYESDKCPKGATVDDISYSASSCPVTSTFPVPGYFRLSQTYASSRHYHDAHPNTDHFTLQQSARPDSRSSHRQAASAEPEQRANREESPVCAPCVPVREEDSRLSSEGSSSPEPAETPSLECPEKSGKGDGKNETAANWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKMTRENRIRELSNSFSFS

Annotated regions:
phrase: KSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKK
type: DOMAIN
name: HD
description: Homeodomain

phrase: NMYLTRERRLE
type: DOMAIN
name: HD_metazoa
description: Homeodomain, metazoa

phrase: VHLTDRQVKI
type: DOMAIN
name: HD_metazoa
description: Homeodomain, metazoa

phrase: WFQNRRMKL
type: DOMAIN
name: HD_metazoa
description: Homeodomain, metazoa

phrase: RKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKK
type: DOMAIN
name: HD
description: Homeodomain

phrase: ISRSVHLTDRQVKIWFQNRRMKL
type: CONSERVED_SITE
name: Homeobox_CS
description: Homeobox, conserved site

phrase: RKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLK
type: DOMAIN
name: HD
description: Homeodomain

phrase: GRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKMTRE
type: DOMAIN
name: HD
description: Homeodomain
Protein sequence:
MDNSLKKNIYDLDKQALDEFIVDAGFKKFRSKQIWNWLYVNGAKEFKQMKNISNDLICNLEKSFFISPLRVKKYMKSSDGTIKWLFLLEDQKEVETVYIPEGKRGTICVSSQVGCALACSFCHTGTMKFKRNLNMSEIIGQVISVKNEIKDWQKRTEERKVTNIVYMGMGEPLLNYKNVIKSINLLSDEEGLAISKRKITLSTSGVVPRINDFKHEKDVNLAISLHAVFDNKRNELVPINRKWPLSNLIDSLKKYSIYRDKKRITFEYIMLKDVNDSVEDAKELIKLIRNLKAKVNLIPFNRWPGSKYEVSSNERIEKFPKYVMEEGKILATIRKPRGEDILAACGQLKSLNLKQI

Annotated regions:
phrase: SSQVGCALACSFCHTGTMKFKRNLNMSEIIGQVISVKNEIKDWQKRTEERKVTNIVYMGMGEPLLNYKNVIKSINLLSDEEGLAISKRKITLSTSGVVPRINDFKHEKDVNLAISLHAVFDNKRNELVPINRKWPLSNLIDSLKKYSIYRDKKRITFEYIMLKDVNDSVEDAKE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: NIYDLDKQALDEFIVDAGFKKFRSKQIWNWLYVNGAKEFKQMKNISNDLICNLEKS
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: EGKRGTICVSSQVGCALACSFCHTGTMKFKRNLNMSEIIGQVISVKNEIKDWQKRTEERKVTNIVYMGMGEPLLNYKNVIKSINLLSDEEGLAISKRKITLSTSGVVPRINDFKHEKDVNLAISLHAVFDNKRNELVPINRKWPLSNLIDSLKKYSIYRDKKRITFEYIMLKDVNDSVEDAKELIKLIRNLKAKVNLIPFNRWPGSKYEVSSNERIEKFPKYVMEEGKILATIRKPRGE
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MGPIGAEADENQTVEEMKVEQYGPQTTPRGELVPDPEPELIDSTKLIEVQVVLILAYCSIILLGVIGNSLVIHVVIKFKSMRTVTNFFIANLAVADLLVNTLCLPFTLTYTLMGEWKMGPVLCHLVPYAQGLAVQVSTITLTVIALDRHRCIVYHLESKISKRISFLIIGLAWGISALLASPLAIFREYSLIEIIPDFEIVACTEKWPGEEKSIYGTVYSLSSLLILYVLPLGIISFSYTRIWSKLKNHVSPGAANDHYHQRRQKTTKMLVCVVVVFAVSWLPLHAFQLAVDIDSQVLDLKEYKLIFTVFHIIAMCSTFANPLLYGWMNSNYRKAFLSAFRCEQRLDAIHSEVSVTFKAKKNLEVRKNSGPNDSFTEATNV

Annotated regions:
phrase: GNSLVIHVVIKFKSMRTVTNFFIANLAVADLLVNTLCLPFTLTYTLMGEWKMGPVLCHLVPYAQGLAVQVSTITLTVIALDRHRCIVYHLESKISKRISFLIIGLAWGISALLASPLAIFREYSLIEIIPDFEIVACTEKWPGEEKSIYGTVYSLSSLLILYVLPLGIISFSYTRIWSKLKNHVSPGAANDHYHQRRQKTTKMLVCVVVVFAVSWLPLHAFQLAVDIDSQVLDLKEYKLIFTVFHIIAMCSTFANPLL
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM
Protein sequence:
MDEEKLPCELHKEGSATQEDHGLEPEEEPGLQNGTAASEGLSSHISGPGGEKTLEGTMEPVRGPDVALPGLNLSLTNGLALGQDGNILEDSIEFKTWRSGPAEEEDVPGSPCPDAGDPQLGLDCPGEPDVRDGFSATFEKILESELLRGTQYSSLDSLDVLSLTDESDSCVSFEAPLTPLIQQRARDSPEAGAGLGNGDMGPEGDLGATGGCDGELGSPLRRSISSSRSENVLSHLSLTSVPNGFHEDGPGGSGGDDEDDEDTDKLLNSASDTSLKDGLSDSDSELSSSEGLEPGSTDPLANGCQGVSEAARRLARRLYHLEGFQRCDVARQLGKNNEFSRLVAGEYLSFFDFSGLTLDRALRTFLKAFPLMGETQERERVLTHFSRRYCQCNPDDSTSEDGIHTLTCALMLLNTDLHGHNIGKKMSCQQFIANLDQLNDGQDFAKDLLKTLYNSIKNEKLEWAIDEDELRKSLSELVDDKFGTGTKKVTRILDGGNPFLDVPQALNATTYKHGVLTRKTHADMDGKRTPRGRRGWKKFYAVLKGTILYLQKDEYRLDKALSEGDLKNAIRVHHALATRASDYSKKSNVLKLKTADWRVFLFQAPSKEEMLSWILRINLVAAIFSAPAFPAAVSSMKKFCRPLLPSCTTRLCQEEQLRSHENKLRQVTAELAEHRCHPLERGLKSKEAEEYRLKEHYLTFEKSRYETYIHLLAVKIKVGSDDLERIEARLATIEGDDPALRKTHSSPALSLGHGPVTGSKATKDTSASDT

Annotated regions:
phrase: TYKHGVLTRKTHADMDGKRTPRGRRGWKKFYAVLKGTILYLQKDEYRLDKALSEGDLKNAIRVHHALATRASDYSKKSNVLKLKTADWRVFLFQAPSKEEMLSWILRINLVAAI
type: DOMAIN
name: PH_domain
description: Pleckstrin homology domain

phrase: YKHGVLTRKTHADMDGKRTPRGRRGWKKFYAVLKGTILYLQKDEYRLDKALSEGDLKNAIRVHHALATRASDYSKKSNVLKLKTADWRVFLFQAPSKEEMLSWILRINLVA
type: DOMAIN
name: PH_9
description: Pleckstrin homology domain 9

phrase: DDEDDEDTDKLLNSASDTSLKDGLSDSDSELSSSEGLEPGSTDPLANGCQGVSEAARRLARRLYHLEGFQRCDVARQLGKNNEFSRLVAGEYLSFFDFSGLTLDRALRTFLKAFPLMGETQERERVLTHFSRRYCQCNPDDSTSEDGIHTLTCALMLLNTDLHGHNIGKKMSCQQFIANLDQLNDGQDFAKDLLKTLYNSIKN
type: DOMAIN
name: Sec7_dom
description: Sec7 domain

phrase: ASDTSLKDGLSDSDSELSSSEGLEPGSTDPLANGCQGVSEAARRLARRLYHLEGFQRCDVARQLGKNNEFSRLVAGEYLSFFDFSGLTLDRALRTFLKAFPLMGETQERERVLTHFSRRYCQCNPDDSTSEDGIHTLTCALMLLNTDLHGHNIGKKMSCQQFIANLDQLNDGQDFAKDLLKTLYNSIKNEK
type: DOMAIN
name: Sec7_dom
description: Sec7 domain

phrase: PGSTDPLANGCQGVSEAARRLARRLYHLEGFQRCDVARQLGKNNEFSRLVAGEYLSFFDFSGLTLDRALRTFLKAFPLMGETQERERVLTHFSRRYCQCNPDDSTSEDGIHTLTCALMLLNTDLHGHNIGKKMSCQQFIANLDQLNDGQDFAKDLLKTLYNSIKNEK
type: DOMAIN
name: Sec7_dom
description: Sec7 domain

phrase: VSEAARRLARRLYHLEGFQRCDVARQLGKNNEFSRLVAGEYLSFFDFSGLTLDRALRTFLKAFPLMGETQERERVLTHFSRRYCQCNPDDSTSEDGIHTLTCALMLLNTDLHGHNIGKKMSCQQFIANLDQLNDGQDFAKDLLKTLYNSIKNE
type: DOMAIN
name: Sec7_dom
description: Sec7 domain

phrase: TTYKHGVLTRKTHADMDGKRTPRGRRGWKKFYAVLKGTILYLQKDEYRLDKALSEGDLKNAIRVHHALATRASDYSKKSNVLKLKTADWRVFLFQAPSKEEMLSWILRINLVA
type: DOMAIN
name: PH_domain
description: Pleckstrin homology domain

phrase: KHGVLTRKTHADMDGKRTP
type: DOMAIN
name: PH_dom-spectrin-type
description: Pleckstrin homology domain, spectrin-type

phrase: ATRASDYSKKSNVLKLK
type: DOMAIN
name: PH_dom-spectrin-type
description: Pleckstrin homology domain, spectrin-type

phrase: WRVFLFQAPSKEEMLSWI
type: DOMAIN
name: PH_dom-spectrin-type
description: Pleckstrin homology domain, spectrin-type
Protein sequence:
MVSLTKRCIAEFIGTFFLVFFGAGAAAITLMIASGGTAPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGRDVVPYIIAQLLGAAFASFIFLQCAGITAATIGGLGATAPFPGIGYWQAMLAETVGTFLLMITIMGIAVDERAPKGFAGIIIGLTVAGIITTIGNITGSSLNPARTFGPYLNDMVFAGTNLWNYFPIYVIGPVVGAVLAALTYQYLTSE

Annotated regions:
phrase: HINPAVTI
type: CONSERVED_SITE
name: MIP_CS
description: Major intrinsic protein, conserved site
Protein sequence:
MRIALGLQYDGSPYAGWQTQLHQPTIQDELEKALTAFIGEEAKAFPVHTITAGRTDTGVHALGQVVHFDTNVGREDFSWVRGVNTFLPKSIVVNWAKEVPEEFSARFSAYERTYIYALHAGPCRSPIVNARAGYLMLPPDQFLDVEAMKKSAECLIGEHDFSSFRSSECQSKTPVKTIYAIDIISQEPWVYFRIRGNAFLHHMIRNIVGCFLQIGQGRQQSGWMAEVLTAKNRQIAAPTFMADGLYLAKIKYPEEFAIPQPWLENAWLPTNVIGK

Annotated regions:
phrase: QYDGSPYAGWQTQLHQPTIQDELEKALTAFIGEEAKAFPVHTITAGRTDTGVHALGQVVHFDTNVGREDFSWVRGVNTFLPKSIVVNWAKEVPEEFSAR
type: DOMAIN
name: PsdUridine_synth_TruA_a/b_dom
description: Pseudouridine synthase I, TruA, alpha/beta domain

phrase: ECLIGEHDFSSFRSSECQSKTPVKTIYAIDIISQEPWVYFRIRGNAFLHHMIRNIVGCFLQIGQGRQQSGWMAEVLTAKNRQIAAPTFMADGLYLAKIKY
type: DOMAIN
name: PsdUridine_synth_TruA_a/b_dom
description: Pseudouridine synthase I, TruA, alpha/beta domain
Protein sequence:
MGRVNDKVVLVTGGAMGMGLTHCTLLAREGATVYLSDMNEELGHQAVAEIRRQGGKAHFLHLDVTNENHWTGAVDTILAESDRLDALVNNAGILTLKPVQDTSNEEWDRIFEINVRSVFLGTRAVIEPMRKAHKGCIVNVSSIYGLVGAPGAAAYEASKGAVRLFTKACAVDLAPFNIRVNSVHPGVIATPMTQQILDAPQSARALLGPTLLGRAAQPMEVSQAVLFLVSDEASFVHGSELVVDGGYTAN

Annotated regions:
Protein sequence:
MAAEQVEDNCISFVEMKFINNTLYFVAENDEDLESDHFGKLEPKLSIIRNLNDQVLFINQGNQPVFEDMPDSDCPDNAPQTIFIIYMYKDSLTRGLAVTISVQCKKMSTLSCENKIVSFKEMNPPDNIDNEGSDIIFFQRSVPGHDDKIQFESSLYKGYFLACKKENDLFKLILKKQDDNGDKSVTFTVQNQH

Annotated regions:
Protein sequence:
MTKIAMANFKSAMPVFKSHAYLKELEKTLKPQHFDRVFVFPDFLGLLPNAFLHFTLGAQNAYPRDCGAFTGEITSKHLEELKIHTLLIGHSERRVLLKESPSFLKEKFDFFKGKNFKIVYCIGEDLTTREKGFRAVKEFLSEQLENIDLNYSNLIVAYEPIWAIGTKKSASLEDIYLTHGFLKQILNQKTPLLYGGSVNAQNAKEILGIDSVDGLLIGSASLELENFKTIISFL

Annotated regions:
phrase: AYEPIWAIGT
type: ACTIVE_SITE
name: Triosephosphate_isomerase_AS
description: Triosephosphate isomerase, active site
Protein sequence:
MDRVDGRKQGQIRPVRMTPNYNKYAEGSVLIEVGDTRVICTATVEERVPPFLKGLGKGWVTAEYSMLPRATGSRTIREAARGKLGGRTMEIQRLIGRALRSVVNLEALGERSLTMDCDVIQADGGTRTASITGAYVAMIFALNRLVEQGMLEKIPVSDFIAATSVGIVKGRPVIDLCYAEDSVAEVDMNVVMTGTGRFVEIQGTGEEATFSREEMNQLLDLAAAGIEELNKVQRQVLGDIAAKIG

Annotated regions:
phrase: DFIAATSVGIVKGRPVIDLCYAEDSVAEVDMNVVMTGTGRFVEIQGTGEEATFSREEMNQLLDLAA
type: DOMAIN
name: ExoRNase_PH_dom2
description: Exoribonuclease, phosphorolytic domain 2

phrase: CDVIQADGGTRT
type: CONSERVED_SITE
name: RNase_PH_CS
description: Ribonuclease PH, conserved site

phrase: QIRPVRMTPNYNKYAEGSVLIEVGDTRVICTATVEERVPPFLKGLGKGWVTAEYSMLPRATGSRTIREAARGKLGGRTMEIQRLIGRALRSVVNLEALGERSLTMDCDVIQADGGTRTASITGAYVAM
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1
Protein sequence:
MDNLSIFSGNANRKLAQDICDHLQMSLGNADVFQFSNENIFVKINENVRGHDVFVIQPFSSPVNRSIMELLIMLDALKRASAARITAVVPYYAYGRTDKKDQPRVPITARLIADCITVAGAHRVVSMDMHAGQIQGFFDMPVDELTAQTIQARYFASKKLSDLTVVAADEGFAKKARQLADRLGAPLAIVEKRRLGNEGVTEAMGIIGNVQGRCALIVDDEIDTAGSLTQAVRIVTKQGAREVYCCATHGVFSGPAIERLHTAPIKELVVTDSIPSPENNLLPNLTVLSVAELLADAICRIHDSRSVSELFY

Annotated regions:
phrase: DMHAGQIQGFFDMPV
type: CONSERVED_SITE
name: PRib_PP_synth_CS
description: Phosphoribosyl pyrophosphate synthetase, conserved site

phrase: SIFSGNANRKLAQDICDHLQMSLGNADVFQFSNENIFVKINENVRGHDVFVIQPFSSPVNRSIMELLIMLDALKRASAARITAVVPYYAYGRTDKKDQPRVPITARLIADCITVA
type: DOMAIN
name: Pribosyltran_N
description: Ribose-phosphate pyrophosphokinase, N-terminal domain

phrase: ARYFASKKLSDLTVVAADEGFAKKARQLADRLGAPLAIVEKRRLGNEGVTEAMGIIGNVQGRCALIVDDEIDTAGSLTQAVRIVTKQGAREVYCCATHGVFSGPAIERLHTAPIKELVVTD
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain
Protein sequence:
MSVMFDPDTAIYPFPPKPTPLSIDEKAYYREKIKRLLKERNAVMVAHYYTDPEIQQLAEETGGCISDSLEMARFGAKHPASTLLVAGVRFMGETAKILSPEKTILMPTLQAECSLDLGCPVEEFNAFCDAHPDRTVVVYANTSAAVKARADWVVTSSIAVELIDHLDSLGEKIIWAPDKHLGRYVQKQTGGDILCWQGACIVHDEFKTQALTRLQEEYPDAAILVHPESPQAIVDMADAVGSTSQLIAAAKTLPHQRLIVATDRGIFYKMQQAVPDKELLEAPTAGEGATCRSCAHCPWMAMNDLQAIAEALEQEGSNHEVHVDERLRERALVPLNRMLDFAATLRG

Annotated regions:
Protein sequence:
MDVSWDADNFEPKLPTTLAASNKWEGEDEDDNVKESWEDEEEEKKDEEKTEAAPPPQPKPKKKIHDKIAERERQEREKAERLVTEKTAEEMTPEQKLAEKLRQQKLQEESDLRLAMETFGVTEGNIGKLDNFHPTTKEEYTEFADLLTKKITFYKAKDEFPGFIDDLVKNILVQMSSADIRRIKLTVDNLYIEKQKAEKNDKTKKATKGKGKAKLKLEGDNAHLNQYESYGNFDDDYDDFI

Annotated regions:
Protein sequence:
MNTSITARELFDQQRDKLALRWVAGPKGEHREIQANSNNARRPSLAGYLNVIYPNKVQILGTEELAWLDSLDARQRWETIEKIIQVQPLALAISKNQSCPEDLRAAADESNTPLWISSKRGHELLNHLSYHLARTLAPRVTLHGVFMEIYSIGVLITGEAGSGKSELALELLSRGHRLVADDAPEFTQIAPDVLDGTCPELLQDLLEVRGLGVLNVRDMFGDTAVKKNKYLRLIVHLTRPMTEPTPSGYERLTGDSGSRHVLDLDVPLITLPVMPGRNLAVLTEAATRLHILRTKGIDPAAMFIARHSNLLERRTP

Annotated regions:
phrase: ITARELFDQQRDKLALRWVAGPKGEHREIQANSNNARRPSLAGYLNVIYPNKVQILGTEELAWLDSLDARQRWETIEKIIQVQPLALAISKNQSCPEDLRAAADESNTPLWISSKRGHELLNHLSYH
type: DOMAIN
name: Hpr_kin/Pase_Hpr_N
description: HPr(Ser) kinase/phosphorylase, N-terminal

phrase: PRVTLHGVFMEIYSIGVLITGEAGSGKSELALELLSRGHRLVADDAPEFTQIAPDVLDGTCPELLQDLLEVRGLGVLNVRDMFGDTAVKKNKYLRLIVHLTRPMTEPTPSGYERLTGDSGSRHVLDLDVPLITLPVMPGRNLAVLTEAATRL
type: DOMAIN
name: Hpr_kin/Pase_C
description: HPr kinase/phosphorylase, C-terminal

phrase: TLAPRVTLHGVFMEIYSIGVLITGEAGSGKSELALELLSRGHRLVADDAPEFTQIAPDVLDGTCPELLQDLLEVRGLGVLNVRDMFGDTAVKKNKYLRLIVHLTRPMTEPTPSGYERLTGDSGSRHVLDLDVPLITLPVMPGRNLAVLTEAATRLHILRTKGIDPAAMFIA
type: DOMAIN
name: Hpr_kin/Pase_C
description: HPr kinase/phosphorylase, C-terminal
Protein sequence:
MYIQRWLYSTNAKDIAILYFIFAIFSGVIGSTMSLIIRLELAAPGNQILHGNHQLFNVLVVGHALLMIFFLVMPGLVGGFGNYMLPLLIGASDMSFARLNNISFWLLPPALVCLVASTLIESWAGTGWTIYPPLSGIQAHSSPSVDLGIFAIHLTSISSLLGAINFIATSYNMRTNGMSYSKMPLFVWAIIITAVMLLLSLPVLTAGVTMLLMDRNFNTSFFEVAGGGDPVLYQHLFWFFGHPEVYILIVPGFGIISHIVSTYSKKPVFGEISMVYAMASIAFLGFLVWSHHMYIVGLDADTRAYFTSSTMVIAVPTGIKIFSWLATLYGGSIRLAVPMLYAIAFLFLFTIGGLTGVALANASLDVAFHDTYYVVGHFHYVLSMGAIFSLFAGYYYWSPQILGLYFNERLAQIQFWLIFVGANVIFMPMHFLGLQGMPRRIPDYPDAYAGWNYVSSIGSVIAIISLALFIYIIYDQLINGLTNKIDNKSVVYSKAPDFVESNTIFANNSIKSASIEFLLNSPPAIHSFNTPAVQS

Annotated regions:
phrase: TNAKDIAILYFIFAIFSGVIGSTMSLIIRLELAAPGNQILHGNHQLFNVLVVGHALLMIFFLVMPGLVGGFGNYMLPLLIGASDMSFARLNNISFWLLPPALVCLVASTLIESWAGTGWTIYPPLSGIQAHSSPSVDLGIFAIHLTSISSLLGAINFIATSYNMRTNGMSYSKMPLFVWAIIITAVMLLLSLPVLTAGVTMLLMDRNFNTSFFEVAGGGDPVLYQHLFWFFGHPEVYILIVPGFGIISHIVSTYSKKPVFGEISMVYAMASIAFLGFLVWSHHMYIVGLDADTRAYFTSSTMVIAVPTGIKIFSWLATLYGGSIRLAVPMLYAIAFLFLFTIGGLTGVALANASLDVAFHDTYYVVGHFHYVLSMGAIFSLFAGYYYWSPQILGLYFNERLAQIQFWLIFVGANVIFMPMHFLGLQGMPRRIPDYPDAYAGWNYVSSIGSVIAIISLALFIYIIYDQLIN
type: DOMAIN
name: Cyt_c_oxase_su1_dom
description: Cytochrome c oxidase subunit I domain

phrase: MYIQRWLYSTNAKDIAILYFIFAIFSGVIGSTMSLIIRLELAAPGNQILHGNHQLFNVLVVGHALLMIFFLVMPGLVGGFGNYMLPLLIGASDMSFARLNNISFWLLPPALVCLVASTLIESWAGTGWTIYPPLSGIQAHSSPSVDLGIFAIHLTSISSLLGAINFIATSYNMRTNGMSYSKMPLFVWAIIITAVMLLLSLPVLTAGVTMLLMDRNFNTSFFEVAGGGDPVLYQHLFWFFGHPEVYILIVPGFGIISHIVSTYSKKPVFGEISMVYAMASIAFLGFLVWSHHMYIVGLDADTRAYFTSSTMVIAVPTGIKIFSWLATLYGGSIRLAVPMLYAIAFLFLFTIGGLTGVALANASLDVAFHDTYYVVGHFHYVLSMGAIFSLFAGYYYWSPQILGLYFNERLAQIQFWLIFVGANVIFMPMHFLGLQGMPRRIPDYPDAYAGWNYVSSIGSVIAIISLALFIYIIYDQLINGLTNKIDNKSVVYSKAPDFVESNTIFANNSIKSASIEFLLNSPPAIHSFNTPAVQ
type: DOMAIN
name: Cyt_c_oxase-like_su1_dom
description: Cytochrome c oxidase-like, subunit I domain

phrase: WFFGHPEVYILIVPGFGIISHIVSTYSKKPVFGEISMVYAMASIAFLGFLVWSH
type: BINDING_SITE
name: Cyt_c_Oxase_su1_BS
description: Cytochrome c oxidase, subunit I, copper-binding site
Protein sequence:
MAGSEKSSLTKPRWLLAELTYACPLQCPYCSNPLDYARLGDELSTEEWKRVLSEARALGAVQLGLSGGEPLTRRDLAEIVTHARQLGYYTNLITSGYGLDEVRIAELKSAGLDHIQVSIQSPEKLLNDELAGTESFEHKLKVARWVKQHGYPMVLCVVIHRQNIHQMQQILEMADELGADYLELANTQYYGWALLNRDHLLPTREQFAEAEAIAQSYKEKVKGRMKIYYVVPDYYEDRPKACMNGWGTTFLTIAPDGMALPCHAARELPGLNCPSVRDFSIREIWYESAAFNRFRSYGWMKEPCRSCPEKEKDFGGCRCQAYLMTGDMADADPVCSKSPHHHRVLEAIASTQRSASDKPLFFRNARNSRALTG

Annotated regions:
phrase: LTYACPLQCPY
type: CONSERVED_SITE
name: MoaA_NifB_PqqE_Fe-S-bd_CS
description: MoaA/NifB/PqqE, iron-sulphur binding, conserved site

phrase: CMNGWGTTFLTIAPDGMALPCHAARELPGLNCPSVRDFSIREIWYESAAFNRFRSYGWMKEPCRSCPEKEKDFGGCRCQAYLMTGDMADADPV
type: DOMAIN
name: 4Fe4S-binding_SPASM_dom
description: 4Fe4S-binding SPASM domain

phrase: EKSSLTKPRWLLAELTYACPLQCPYCSNPLDYARLGDELSTEEWKRVLSEARALGAVQLGLSGGEPLTRRDLAEIVTHARQLGYYTNLITSGYGLDEVRIAELKSAGLDHIQVSIQSPEKLLNDELAGTESFEHKLKVARWVKQHGYPMVLCVVIHRQNIHQMQQILEMADELGADYLELANTQYYGWALLNRDHLLPTREQFAEAEAIAQSYKEKVKGRMKIYYVVPDYYEDRPKACMNGWGTTFLTIAPDGMALPCHAARELPGLNCPSVRDFSIREIWYESAAFNRFRSYGWMKEPCRSCPEKEKDFGGCRCQAYLMTGDMADADPVCSKSPHHHRVLEAIASTQRSASDKPLFFRNARNSR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: GWGTTFLTIAPDGMALPCHAARELPGLNCPSVRDFSIREIWYESAAFNRFRSYGWMKEPCRSC
type: DOMAIN
name: 4Fe4S-binding_SPASM_dom
description: 4Fe4S-binding SPASM domain

phrase: LTYACPLQCPYCSNPLDYARLGDELSTEEWKRVLSEARALGAVQLGLSGGEPLTRRDLAEIVTHARQLGYYTNLITSGYGLDEVRIAELKSAGLDHIQVSIQSPEKLLNDELAGTESFEHKLKVARWVKQHGYPMVLCVVIHRQNIHQMQQILE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: RWLLAELTYACPLQCPYCSNPLDYARLGDELSTEEWKRVLSEARALGAVQLGLSGGEPLTRRDLAEIVTHARQLGYYTNLITSGYGLDEVRIAELKSAGLDHIQVSIQSPEKLLNDELAGTESFEHKLKVARWVKQHGYPMVLCVVIHRQNIHQMQQILEMADELGADYLELANTQYYGWALLNRDHLLPTREQFAEAEAIA
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: LTKPRWLLAELTYACPLQCPYCSNPLDYARLGDELSTEEWKRVLSEARALGAVQLGLSGGEPLTRRDLAEIVTHARQLGYYTNLITSGYGLDEVRIAELKSAGLDHIQVSIQSPEKLLNDELAGTESFEHKLKVARWVKQHGYPMVLCVVIHRQNIHQMQQILEMADELGADYLELANTQYYGWALLNRDHLLPTREQFAEAEAIAQSYKEKVKG
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MKEICSFSLKELKSWMQTVEVQAFHADQVWDWIYKKWANSFEVMTNLKKELRQLLAQEFSFPALKLLRTLASEDQETVKFLWELPDKRKVESVLILSEERRTVCVSSQVGCPAKCAFCASGKEGLIRNLSPAEIVEQVLHIDRFLHEKGERVSHIVFMGMGEPLENYEAVIQSIEILNAPHGLNISQRRITVSTVGVVEGIHRLARENVKVNLVLSLHAPNEHIRKKIIPYARKYPLEEILLAMDAYAKTTHRDITYEYTLLSGLNDNKVHAEELSTLLRNKQCTVNLIPYNPVDGLKLQRPTKEKIMEFREILEKEGINTTWRYTKGKDIQAACGQLALQP

Annotated regions:
phrase: RTVCVSSQVGCPAKCAFCASGKEGLIRNLSPAEIVEQVLHIDRFLHEKGERVSHIVFMGMGEPLENYEAVIQSIEILNAPHGLNISQRRITVSTVGVVEGIHRLARENVKVNLVLSLHAPNEHIRKKIIPYARKYPLEEILLAMDAYAKTTHRDITYEYTLLSGLNDNKVHAEELSTLLRNKQCTVNLIPYNPVDGLKLQRPTKEKIMEFREILE
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: KEICSFSLKELKSWMQTVEVQAFHADQVWDWIYKKWANSFEVMTNLKKELRQLLAQEFSFPALKLLRTLASEDQETVKFLWELPDKRKVESVLILSEERRTVCVSSQVGCPAKCAFCASGKEGLIRNLSPAEIVEQVLHIDRFLHEKGERVSHIVFMGMGEPLENYEAVIQSIEILNAPHGLNISQRRITVSTVGVVEGIHRLARENVKVNLVLSLHAPNEHIRKKIIPYARKYPLEEILLAMDAYAKTTHRDITYEYTLLSGLNDNKVHAEELSTLLRNKQCTVNLIPYNPVDGLKLQRPTKEKIMEFREILEKEGINTTWRYTKGKDIQAACGQLA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SSQVGCPAKCAFCASGKEGLIRNLSPAEIVEQVLHIDRFLHEKGERVSHIVFMGMGEPLENYEAVIQSIEILNAPHGLNISQRRITVSTVGVVEGIHRLARENVKVNLVLSLHAPNEHIRKKIIPYARKYPLEEILLAMDAYAKTTHRDITYEYTLLSGLNDNK
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: ICSFSLKELKSWMQTVEVQAFHADQVWDWIYKKWANSFEVMTNLKKELRQLLAQ
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: SEERRTVCVSSQVGCPAKCAFCASGKEGLIRNLSPAEIVEQVLHIDRFLHEKGERVSHIVFMGMGEPLENYEAVIQSIEILNAPHGLNISQRRITVSTVGVVEGIHRLARENVKVNLVLSLHAPNEHIRKKIIPYARKYPLEEILLAMDAYAKTTHRDITYEYTLLSGLNDNKVHAEELSTLLRNKQCTVNLIPYNPVDGLKLQRPTKEKIMEFREILEKEGINTTWRYTKGK
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MKLKFTKMHGLGNDFIVIDAINQSVSLDPATIRRWADRHFGIGFDQLLVVEKPGESGDFRYRIFNADGGEVEQCGNGARCFARFVRDHDLTRKNTIRVETACGIIMPTVEENGEVSVDMGIPRFDPARIPFITQERALTYPLNVNDREIEISAVSMGNPHAVQIVPDIDLAPVTSEGPAIESHPFFPEKVNAGYMQIVDRTHIRLRVFERGTGETLACGTGACAAVVSGISRGLLDSEVQVTMRGGNLRIRWEGEDQPVWMTGPAVSVFEGTIDL

Annotated regions:
phrase: NADGGEVEQCGNGA
type: ACTIVE_SITE
name: DAP_epimerase_AS
description: Diaminopimelate epimerase, active site
Protein sequence:
MMSTPETATEATAPEAAPAPSLGADAPAPLPSLIGLDRDKLGAALDAIGVRGSDRRMRVNQLWHWIYLRGATDFAEMTNVSKHLRADLAAAYSLARPEIVMEQVSQDGTRKWLLRFPADHPGERPHDIETVYIPESDRGTLCVSSQVGCTLNCSFCHTGTQRLVRNLTAAEIVAQVMVARDRLGDYPGRDRATGPGLPTEGDRLVTNIVFMGMGEPLYAYDSVKEAIETLSDGDGLGLGKRRITVSTSGVVPEIERLGAEVGPMLAISLHAVRDKLRDELVPINKKYPIAELMEACRTYPAASNAKRITFEYVMLKGVNDSPADARALVKLLEGVPAKINLIPFNPWPGTQYECSDWETIERFSDIVFRAGYASPVRTPRGRDILAACGQLKSESEKLSARERLALRAMMAQDE

Annotated regions:
phrase: ESDRGTLCVSSQVGCTLNCSFCHTGTQRLVRNLTAAEIVAQVMVARDRLGDYPGRDRATGPGLPTEGDRLVTNIVFMGMGEPLYAYDSVKEAIETLSDGDGLGLGKRRITVSTSGVVPEIERLGAEVGPMLAISLHAVRDKLRDELVPINKKYPIAELMEACRTYPAASNAKRITFEYVMLKGVNDSPADARALVKLLEGVPAKINLIPFNPWPGTQYECSDWETIERFSDIVFRAGYASPVRTPRGRDI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: PSLIGLDRDKLGAALDAIGVRGSDRRMRVNQLWHWIYLRGATDFAEMTNVSKHLRADLAAAYSLARPEIVMEQVSQDGTRKWLLRFPADHPGERPHDIETVYIPESDRGTLCVSSQVGCTLNCSFCHTGTQRLVRNLTAAEIVAQVMVARDRLGDYPGRDRATGPGLPTEGDRLVTNIVFMGMGEPLYAYDSVKEAIETLSDGDGLGLGKRRITVSTSGVVPEIERLGAEVGPMLAISLHAVRDKLRDELVPINKKYPIAELMEACRTYPAASNAKRITFEYVMLKGVNDSPADARALVKLLEGVPAKINLIPFNPWPGTQYECSDWETIERFSDIVFRAGYASPVRTPRGRDILAACGQLKSESEKLSAR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TNIVFMGMGEPLYAYDSVKEAIETLSDGDGLGLGKRRITVSTSGVVPEIERLGAEVGPMLAISLHAVRDKLRDELVPINKKYPIAELMEACRTYPAASNAKRITFEYVMLKGVNDS
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LIGLDRDKLGAALDAIGVRGSDRRMRVNQLWHWIYLRGATDFAEMTNVSKHLRADLA
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MDEPPSDVLAFLRQHPSLRLLPNTRKVRCSLTGHELPCRLPELQEYTRGKKYQRLSSSFSNFDYAAFEPHIVPSTKNRHQLFCKLTLRHINKSPEHVLRHTQGRRYQRALHQYEECQKQGVEYVPACLLHKRKKREDQTNSDELPGQRTGFWEPASSDEEDALSDDSMTDLYPPELFTKRELGKPKNDDTPEDFLTDQQDEKPEHSEEKSFREREEARVGHKRGRKLRKKQLTSLTKKFKSYHHKPKNFSSFKQLGR

Annotated regions:
Protein sequence:
MNNSLIVRQLGLQDYQEIWHKMQDFTDTRNAETQDEIWLVQHYPVFTQGQAGKPEHLLQRSEIPVVQSDRGGQITYHAPGQQVMYVLIDIKRHKNLNVRQLVTALEQTVVKTLAEYGIESYPKPDAPGVYVDGKKICSLGLRIRRGCSFHGLALNINMDLNPFHYINPCGYAGLEMCQLADFVNQDEADWDNVSAKLIKHFADLLGYNITTL

Annotated regions:
phrase: RGGQITYHAPGQQVM
type: CONSERVED_SITE
name: Octanoyltransferase_CS
description: Octanoyltransferase, conserved site

phrase: AETQDEIWLVQHYPVFTQGQAGKPEHLLQRSEIPVVQSDRGGQITYHAPGQQVMYVLIDIKRHKNLNVRQLVTALEQTVVKTLAEYGIESYPKPDAPGVYVDGKKICSLGLRIRRGCSFHGLALNINMDLNPFHYINPCGYAGLEMCQLADFVNQDEADWDNVSAKLIKHFADLLGYN
type: DOMAIN
name: BPL_LPL_catalytic
description: Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain

phrase: YQEIWHKMQDFTDTRNAETQDEIWLVQHYPVFTQGQAGKPEHLLQRSEIPVVQSDRGGQITYHAPGQQVMYVLIDIKRHKNLNVRQLVTALEQTVVKTLAEYGIESYPKPDAPGVYVDGKKICSLGLRIRRGCSFHGLALNINMDLNPFHYINPCGYAGLEMCQLADFVNQDEADWDNVSAKLIKHF
type: DOMAIN
name: BPL_LPL_catalytic
description: Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain
Protein sequence:
MTMEVDILELSDRSAKFVLSRVSMAFANGVRRAMIADVPTLAIEYVNLYDNTSVLYDEQLALRLSLIPLVTDIETYMPQAECEVCGGEGCPACEVSLTLSAEGPGTVYSRDLISSDPKIQPADPNIPIVELKKGQKLVLEAIAHMGYGRDSVKWQAGVACGYKNVPVITIENCDACGHCAAECPKGIIRVEEAGARIAEDDLIKCSLCRLCEQVCDINAIKVDFYENAFVFTMESDGSYTAKDLTINAANVIKGKAEELLAILDQL

Annotated regions:
phrase: KFVLSRVSMAFANGVRRAMIADVPTLAIEYVNLYDNTSVLYDEQLALRLSLIPLVTDIETYMPQAECEVCGGEGCPACEVSLTLSAEGPGTVYSRDLISSDPKIQPADPNIPIVELKKGQKLVLEAIAHMGYGRDSVKWQAGVACGYKNVPVITIENCDACGHCAAECPKGIIRVEEAGARIAEDDLIKCSLCRLCEQVCDINAIKVDFYENAFVFTMESDGSYTAKDLTINAANVIKG
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: QLALRLSLIPLVTDIETYMPQAECEVCGGEGCPACEVSLTLSAEGPGTVYSRDLISSDPKIQPADPNIPIVELKKGQKLVLEAIAHMGYGRDSV
type: DOMAIN
name: DNA-dir_RNA_pol_insert
description: DNA-directed RNA polymerase, insert domain

phrase: NGVRRAMIADVPTLAIEYVNLYDNTSVLYDEQLALRLSLI
type: CONSERVED_SITE
name: DNA-dir_RNA_pol_30-40kDasu_CS
description: DNA-directed RNA polymerase, 30-40kDa subunit, conserved site

phrase: ARIAEDDLIKCSLCRLCEQVCDINAIKVDF
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: NVPVITIENCDACGHCAAECPKGIIRVEE
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: SAKFVLSRVSMAFANGVRRAMIADVPTLAIEYVNLYDNTSVLYDEQLALRLSLIPLVTDIETYMPQAECEVCGGEGCPACEVSLTLSAEGPGTVYSRDLISSDPKIQPADPNIPIVELKKGQKLVLEAIAHMGYGRDSVKWQAGVACGYKNVPVITIENCDACGHCAAECPKGIIRVEEAGARIAEDDLIKCSLCRLCEQVCDINAIKVDFYENAFVFTMESDGSYTAKDLTINAANVIKGKAEELLA
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type
Protein sequence:
MKSWCKNLLAAGLSLAMLSACSSSDVEEEPVSELTAIQATVFPEVSWSASVGDGVGDYYSRLTPAVRYGKIFAADRYGAVMAFDEASGEQVWRKDFSEEFRDNALAKNKGARLAAGITAARNKLFIGGESGLLAALNAEDGQVLWHVIAGGELLSKPTVADDVVVVSTSSGSLEAYNVDTGAKLWVYDMQLPNLTLRGTGSAAYEAGGFFIGTADGKVAVVVKNNGQAAWEQAIYNPTGGNEFTRMADVDMTPLILGDNLYAVSYNGNLVSMELRTGRIIWTRKYSSFNELTTAGLSLFLVDDHSRIYSVDRRNGLELWSNSELVNRTLTSPEVYKDYLVVGDFEGYLHFIDRSTGSIVGRIQVDSSGLFSQPIVVDDKIYVQGRSGKLAVVTLP

Annotated regions:
phrase: ARLAAGITAARNKLFIGGESGLLAALNAEDGQVLWHVIAGGELLSKPTVADDVVVVSTSSGSLEAYNVDTGAKLWVYDMQLPNLTLRGTGSAAYEAGGFFIGTADGKVAVVVKNNGQAAWEQAIYNPTGGNEFTRMADVDMTPLILGDNLYAVSYNGNLVSMELRTGRIIWTRKYSSFNELTTAGLSLFLVDDHSRIYSVDRRNGLELWS
type: REPEAT
name: PQQ_repeat
description: Pyrrolo-quinoline quinone repeat

phrase: PAVRYGKIFAADRYGAVMAFDEASGEQVWRKDFSEEFR
type: REPEAT
name: PQQ_repeat
description: Pyrrolo-quinoline quinone repeat

phrase: GITAARNKLFIGGESGLLAALNAEDGQVLWHV
type: REPEAT
name: PQQ_b-propeller_rpt
description: Pyrrolo-quinoline quinone beta-propeller repeat

phrase: PEVYKDYLVVGDFEGYLHFIDRSTGSIVGRI
type: REPEAT
name: PQQ_b-propeller_rpt
description: Pyrrolo-quinoline quinone beta-propeller repeat

phrase: PLILGDNLYAVSYNGNLVSMELRTGRIIWTR
type: REPEAT
name: PQQ_b-propeller_rpt
description: Pyrrolo-quinoline quinone beta-propeller repeat

phrase: PAVRYGKIFAADRYGAVMAFDEASGEQVWRK
type: REPEAT
name: PQQ_b-propeller_rpt
description: Pyrrolo-quinoline quinone beta-propeller repeat

phrase: ELTTAGLSLFLVDDHSRIYSVDRRNGLELWSN
type: REPEAT
name: PQQ_b-propeller_rpt
description: Pyrrolo-quinoline quinone beta-propeller repeat

phrase: PTVADDVVVVSTSSGSLEAYNVDTGAKLWVY
type: REPEAT
name: PQQ_b-propeller_rpt
description: Pyrrolo-quinoline quinone beta-propeller repeat

phrase: SAAYEAGGFFIGTADGKVAVVVKNNGQAAWEQ
type: REPEAT
name: PQQ_b-propeller_rpt
description: Pyrrolo-quinoline quinone beta-propeller repeat