nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MKLLLILGSVIALPTFAAGGGDLDASDYTGVSFWLVTAALLASTVFFFVERDRVSAKWKTSLTVSGLVTGIAFWHYMYMRGVWIETGDSPTVFRYIDWLLTVPLLICEFYLILAAATNVAGSLFKKLLVGSLVMLVFGYMGEAGIMAAWPAFIIGCLAWVYMIYELWAGEGKSACNTASPAVQSAYNTMMYIIIFGWAIYPVGYFTGYLMGDGGSALNLNLIYNLADFVNKILFGLIIWNVAVKESSNA

Annotated regions:
phrase: RYIDWLLTVPLL
type: BINDING_SITE
name: Rhodopsin_retinal_BS
description: Rhodopsin, retinal binding site
Protein sequence:
MTTRIVVAQILGAHGVHGRVKLKSFTADETAVFGYAPLTDESGRREFKLRRTGTGKDHFLAEVDGITGKEAADALRGTRLYIERDRLPAPEDEDEFYHADLIGLDTVTADDQPFGTIKAIYDFGAGDMLEIRHVSEKTVFLPFTKACVPVIEIAAGRVVVEPPANFFAPAGPQPAEGEEMPDGALEALEGEEAGAGTAPQP

Annotated regions:
phrase: VVAQILGAHGVHGRVKLKSFTADETAVFGYAPLTDESGRREFKLRRTGTGKDHFLAEVDGITGKEAADALRGTRLYIER
type: DOMAIN
name: RimM_N
description: RimM, N-terminal

phrase: ADLIGLDTVTADDQPFGTIKAIYDFGAGDMLEIRHVSEKTVFLPFTKACVPVIEIAAGRVVVEPP
type: DOMAIN
name: PRC_RimM
description: Ribosome maturation factor RimM, PRC barrel domain
Protein sequence:
MRVTTSFPLGTLRDTPSEAEIISHQLLLKGGYIRRVNSGIYAYMPIMLRVIEKISTIIEKELNNIYCSKLLLPQLHPAELWKKSERWEGYTAGEGIMFNLKDRQGKEFGLAPTHEEVITSIASEMINSYKQLPLCFYQIQTKFRDEIRPRFGLMRSREFIMKDAYSFHSSKEDLASFYEKMEKAYENIFKNCGLDTVGVDADSGAIGGAASKEFMVTADAGEDSILFTESGSYAANIEKAVSLPSKEIPLIRSHEEWIETPNQKSIVDICQNNNLDASQIIKVVIFLAKFEDKSEVPILACIRGDQNINEVKLFNLINKKYISNLIHLKIVDDNAIINKNLINFPLGFIGPDINDETIKINSSWDKSWIRIADYSASSLSIFVSGGNKVDFHKVFRAFSFIEKKFLISDIRNAKKGDCISQESNEELKEKRGIEIGHIFQLGQKYSEKLNAKFSDKNGQLKNLWMGCYGIGVTRIAQAAIEQNHDENGISWPIQISPFEILIIPTNLKDPIQKELTQEIYEEFISNQIDVLLDDRDDRAGVKFKDADLIGIPFQIIIGRDSINKEVEFFSRSSKSKIKIASKNLLEKFISESKVMYNKNS

Annotated regions:
phrase: PQLHPAELWKKSERWEGYTAGEGIMFNLKDRQGKEFGLAPTHEEVITSIASEMINSYKQLPLCFYQIQTKFRDEIRPRFGLMRSREFIMKDAYSFHSSKEDLASFYEKMEKAYENIFKNCGLDTVGVDADSGAIGGAASKEFMVTADAGEDSILFTESGSYAANIEKAVSLPSKEIPLIRSHEEWIETPNQKSIVDICQNNNLDASQIIKVVIFLAKFEDKSEVPILACIRGDQNINEVKLFNLINKKYISNLIHLKIVDDNAIINKNLINFPLGFIGPDINDETIKINSSWDKSWIRIADYSASSLSIFVSGGNKVDFHKVFRAFSFIEKKFLISDIRNAKKGDCISQESNEELKEKRGIEIGHIFQLGQKYSEKLNAKFSDKNGQLKNLWMGCYGIGVTRIAQAAIEQNHDENGISW
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: ILIIPTNLKDPIQKELTQEIYEEFISNQIDVLLDDRDDRAGVKFKDADLIGIPFQIIIGRDSINKEVEFFSRSSKSKIKIASKNLLEKF
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: FNLKDRQGKEFGLAPTHEEVITSIASEMINSYKQLPLCFYQIQTKFRDEIRPRFGLMRSREFIMKDAYSFHSSKEDLASFYEKMEKAYENIFKNCGLDTVGVDADSGAIGGAASKEFMVTADAGEDSILFTESGSYAANIEKAVSLPSKEIPLIRSHEEWIETPNQKSIVDICQNNNLDASQIIKVVIFLAKFEDKSEVPILACIRGDQNINEVKLFNLINKKYISNLIHLKIVDDNAIINKNLINFPLGFIGPDINDETIKINSSWDKSWIRIADYSASSLSIFVSGGNKVDFHKVFRAFSFIEKKFLISDIRNAKKGDCISQESNEELKEKRGIEIGHIFQLGQKYSEKLNAKFSDKNGQLKNLWMGCYGIGVTRIAQAAIEQ
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
Protein sequence:
MSAEDLPLGRPVPGQLTFTAPRRGKPPRHLADLDPAERRAVAGELGVPAFRANQLSRHYFEHLSIDPSTMTDLPAAARDQLVGDLLPPLLTPVRELQADRGATIKSVWRLHDGALVESVLMRYPKRVTICISSQAGCGMNCPFCATGQAGLTRNMSTGEIVDQVRAGAAWLRSGDLPAVVGGSGGVDLGSEAENEGDGAAYGPNRISNIVFMGMGEALANYKAAIGAIRRLTDKAPDGFGISARGVTMSTVGLVPGIDKLAAEGIPVTLALSLHAPDDGLRDELVPINTRWKVDEAIDAAYRYFQATKRRVSIEYALIRDINDQAWRADLLGEKLNARGRGWVHVNPIPLNPTPGSKWTASRPGVEQQFVERLRAHGIPTTVRDTRGSDIDGACGQLAAATP

Annotated regions:
phrase: KPPRHLADLDPAERRAVAGELGVPAFRANQLSRHYFEHLSIDPSTMTDLPAAARDQLVGDLLPPLLTPVRELQADRGATIKSVWRLHDGALVESVLMRYPKRVTICISSQAGCGMNCPFCATGQAGLTRNMSTGEIVDQVRAGAAWLRSGDLPAVVGGSGGVDLGSEAENEGDGAAYGPNRISNIVFMGMGEALANYKAAIGAIRRLTDKAPDGFGISARGVTMSTVGLVPGIDKLAAEGIPVTLALSLHAPDDGLRDELVPINTRWKVDEAIDAAYRYFQATKRRVSIEYALIRDINDQAWRADLLGEKLNARGRGWVHVNPIPLNPTPGSKWTASRPGVEQQFVERLRAHGIPTTVRDTRGSDIDGACGQLAA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: YPKRVTICISSQAGCGMNCPFCATGQAGLTRNMSTGEIVDQVRAGAAWLRSGDLPAVVGGSGGVDLGSEAENEGDGAAYGPNRISNIVFMGMGEALANYKAAIGAIRRLTDKAPDGFGISARGVTMSTVGLVPGIDKLAAEGIPVTLALSLHAPDDGLRDELVPINTRWKVDEAIDAAYRYFQATKRRVSIEYALIRDINDQAWRADLLGEKLNARGRGWVHVNPIPLNPTPGSKWTASRPGVEQQFVERLRAHGIPTTVRDTRGS
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MFGKSIEAYTKACEVIPGGVDSPVRAFKSVGGTPPFIKKGKGAYLYDVDGNKYVDFVQSWGPLIFGHCDKDIEKVVIKTAKKGLSFGAPTKLETKLASEIVEMYDNIDKVRFVSSGTEATMSAIRLARGVTGKNDIVKFEGCYHGHSDSLLVQAGSGLATFGSPSSPGVPSDLTKHTLLCEYNNIKNLEKCFADSSDIACIIIEPIAGNMGLVPASEEFLKACRELCDKHGALLIFDEVMSGFRASLTGASGIVKTKADIITFGKVIGAGMPVGAFAASKEIMSNLSPEGKIYQAGTLSGNPVAMAAGLKSLRKLKANPDIYDELNKKALRLVNGLKKIANKYEIPFQVDTRGSMFGFFFCEKEPKNFKDVGLCDFKRFATFHHEMLKKGFYFACSQYETGFICTKITNKDIDACLKAANEVMKNL

Annotated regions:
phrase: LIFDEVMSGFRASLTGASGIVKTKADIITFGKVIGA
type: CONSERVED_SITE
name: Aminotrans_3_PPA_site
description: Aminotransferases class-III pyridoxal-phosphate attachment site
Protein sequence:
MSSITETFGVRIDATNSLVQAAIYGFLLAGVAAFAAPIVSTIRVLLSLFVLPGKSLSSFGPRGTWALITGASDGIGKEFALALAAKGYNLILVSRTQSKLDSLAADISSKYGPKISTKTLAMDFAQNKDSDYNNLKKLVDGLDVSILINNVGLSHSIPVPFAETPKQEMTDIIMINCMATLRVTQLLTPGMISRKRGLILTMASFGGFFPTPLLATYSGSKAFLQQWSSALGSELEPHGVHVQCVQSHLITTAMSKIRKPSALVPNPKQFVKATLSKLGRSGGAQNVAFTSTPYWSHGIMQWFLSRFLGERSPIVVKINRGMHEDIRRRALRKAERDAKKQ

Annotated regions:
phrase: SFGGFFPTPLLATYSGSKAFLQQWSSAL
type: CONSERVED_SITE
name: Sc_DH/Rdtase_CS
description: Short-chain dehydrogenase/reductase, conserved site
Protein sequence:
MNKALKGLGIITTIAMLFVLIGGALVTKTGSGMGCGRSWPLCNGSIFPALTLESIIEWSHRFVSGTSGVLVLALAIWTWKKIGHIRETKFLAVMSVVFLILQALLGAAAVVFGSSALIMALHFGISLISFASVLLLTLLVFEADSKQKSESFYIGKTMQFHMIGIIIYTYVVVYTGAYVRHTSSSLACLDFPMCSTENGWLPGKFHEWVQMGHRAAALLLFAWIIAAAVHAARQYKNQKRIYWGWMISLILIILQAASGIAVVYSRLDLGFALAHAFFISCLFGILCYFLLLVARYRRQVQK

Annotated regions:
Protein sequence:
MSLLLENLIEEDTIFFAGSISEYDDLQMVIAGAKSKFPRSMLSIFNIVPRTMSKYELELIHNENITGAMFTTMYNIRNNLGLGDDKLTIEAIENYFLDPNNEVMPLIINNTDMTAVIPKKSGRRKNKNMVIFRQGSSPILCIFETRKKINIYKENMESASTEYTPIGDNKALISKYAGINVLNVYSPSTSMRLNAIYGFTNKNKLEKLSTNKELESYSSSPLQEPIRLNDFLGLLECVKKNIPLTDIPTKD

Annotated regions:
Protein sequence:
MAHRAQVGLQDATSPIMEELVIFHDHALMIIFLICFLVLYALFLTLTTKLTNTNISDAQEMETIWTTLPAIILILIALPSLRILYLTDEINDPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPVEAPVRMMITSQDVLHSWTVPSLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMGPVFAL

Annotated regions:
phrase: VLHSWTVPSLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSF
type: BINDING_SITE
name: Copper_CuA
description: Copper centre Cu(A)

phrase: PSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPVEAPVRMMITSQDVLHSWTVPSLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFE
type: DOMAIN
name: CcO_II_C
description: Cytochrome c oxidase subunit 2, C-terminal

phrase: DPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPVEAPVRMMITSQDVLHSWTVPSLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELIPLKIFEMGPV
type: DOMAIN
name: CcO_II-like_C
description: Cytochrome c oxidase subunit II-like C-terminal

phrase: HRAQVGLQDATSPIMEELVIFHDHALMIIFLICFLVLYALFLTLTTKLTNTNISDAQEMETIWTTLPAIILILIALPSLR
type: DOMAIN
name: Cyt_c_oxidase_su2_TM_dom
description: Cytochrome C oxidase subunit II, transmembrane domain

phrase: IMEELVIFHDHALMIIFLICFLVLYALFLTLTTKLTNTNISDAQEMETIWTTLPAIILILIALPSLRILYLTDEINDPSFTIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPVEAPVRMMITSQDVLHSWTVPSLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLELI
type: DOMAIN
name: Cyt_c_oxidase_su2
description: Cytochrome c oxidase, subunit II

phrase: TIKSIGHQWYWTYEYTDYGGLIFNSYMLPPLFLEPGDLRLLDVDNRVVLPVEAPVRMMITSQDVLHSWTVPSLGLKTDAIPGRLNQTTFTATRPGVYYGQCSEICGANHSFMPIVLE
type: DOMAIN
name: CcO_II-like_C
description: Cytochrome c oxidase subunit II-like C-terminal

phrase: MAHRAQVGLQDATSPIMEELVIFHDHALMIIFLICFLVLYALFLTLTTKLTNTNISDAQEMETIWTTLPAIILILIALPSLRILYLTDEI
type: DOMAIN
name: Cyt_c_oxidase_su2_TM_dom
description: Cytochrome C oxidase subunit II, transmembrane domain
Protein sequence:
MYLKGLYTALITPFTPTGQLDEEGLKKLIQIQLHHQVDGVVVLGTTGESPTLTQIEKRRIIEIALEEIQGRIKVIVGTGSYSTQQAIEQTLQAKQMGADAALIVTPYYNKPTQEGIFKHFEAINQAVSFPICLYNIQGRTGQNIQTHTLKRISTLSSIIGVKETSGDINQIMDVIEAFRQSHPNFAILSGDDALTLPMIALGGHGIISVVSNLVPAAMKSLVNAALNGNFKKARIIHNQLYSFIKAAFIETNPIPIKAALSLSKLPAGSCRLPLCDLSQNHSQKLAQILNELPQEWISHG

Annotated regions:
phrase: GVVVLGTTGESPTLTQI
type: CONSERVED_SITE
name: Schiff_base-form_aldolases_CS
description: Schiff base-forming aldolase, conserved site
Protein sequence:
MLSTILRNNFVRRSFSSRIFSQNEYETAADSTLERLSDYFDQIADSFPVSEQFDVSHAMGVLTVNVSKSVGTYVINKQSPNKQIWLSSPMSGPKRYDLEEEGKWTYAHDGEQLDSLLNREFRKILADDRIDFSRHV

Annotated regions:
phrase: VINKQSPNKQIWLS
type: CONSERVED_SITE
name: Frataxin_CS
description: Frataxin conserved site
Protein sequence:
MGDDNDTDITEFILLGFSGYGFLQGHLFWGVLCIYVVTLLGNSLIVLLTLADSALHSPMYFFLRHFSVVEILYTTTIVPRMLADLRSSCPTIPLASCFTQLYFFALFGIAECCLLTAMAYDRYAAICCPLHYTTLMSQGTYTGLVGASYLAGVISGTTHSIFIFTLPFRGAKTIHHFLCDILPVLRLATASTFWGEVGNLFVTITFIFVPFLLIVASYACILVTILGVATSQGRQKLFSTCSSHLFVVILFFGTATVAYMRPQADSFGNTDQILTLVYTVVTPMCNPFVYSLRNKEVTGAMRRLMKRYLWGP

Annotated regions:
phrase: GNSLIVLLTLADSALHSPMYFFLRHFSVVEILYTTTIVPRMLADLRSSCPTIPLASCFTQLYFFALFGIAECCLLTAMAYDRYAAICCPLHYTTLMSQGTYTGLVGASYLAGVISGTTHSIFIFTLPFRGAKTIHHFLCDILPVLRLATASTFWGEVGNLFVTITFIFVPFLLIVASYACILVTILGVATSQGRQKLFSTCSSHLFVVILFFGTATVAYMRPQADSFGNTDQILTLVYTVVTPMCNPFV
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM
Protein sequence:
MSRRNPCRYEIRGKCNRGSSCTFNHNYWSWPDHVLLVRANYMLNQLLRNTDRTDGLSLISGAGREDRTQDFVLGSANVVQNYIEGNTTITKSAACYSLYNIIKQLQENDVKTSRDSMLEDPKHVALHNLILSYVDMSKNPASLINSLKRLPREKLKKLAKIILQLSAGPESDNANGNTLQKGDSNN

Annotated regions:
phrase: MSRRNPCRYEIRGKCNRGSSCTFNHNY
type: DOMAIN
name: Znf_CCCH
description: Zinc finger, CCCH-type

phrase: SRRNPCRYEIRGKCNRGSSCTFNHN
type: DOMAIN
name: Znf_CCCH
description: Zinc finger, CCCH-type

phrase: RNPCRYEIRGKCNRGSSCTFNH
type: DOMAIN
name: Znf_CCCH
description: Zinc finger, CCCH-type
Protein sequence:
MFIGIVTLFPEMFKAITEFGVTGRAVKQNLLQVRCYNPRDFTHDKHKTVDDRPYGGGPGMLMMVQPLRDAIHSAKAEAGEGVKVIYLSPQGRKLEQSGVTELAQNKKLILVCGRYEGIDERLIQTEVDEEWSIGDYVLTGGELPAMTLIDAVARFIPGVLGKQASADEDSFAAGLLDCPHYTRPEELDGLTVPPVLMSGNHEQIRKWRLTQSLERTWLRRPELLEKLALTDEQKKILNQIKSETV

Annotated regions:
phrase: GRAVKQNLLQVRCYNPRDFTHDKHKTVDDRPYGGGPGMLMMVQPLRDAIHSAKAEAGEGVKVIYLSPQGRKLEQSGVTELAQNKKLILVCGRYEGIDERLIQTEVDEEWSIGDYVLTGGELPAMTLIDAVARFIPGVLGKQASADEDSFAAGLLDCPHYTRPEELDGLTVPPVLMSGNHEQIRKWRLTQSLERTWLRR
type: DOMAIN
name: tRNA_MeTrfase_TRMD/TRM10
description: tRNA methyltransferase TRMD/TRM10-type domain
Protein sequence:
MRKVKSARKLGRTASHRKATLANLSTQLLLYKRIETTEAKAKETRKYVEKIITKAKGGTVHAQRIIFKKIRDKAAIRELFEDIVGKVADRNGGYTRVIKLAPRYGDAAKMAVIELVDYHEAPESAPVKAKQDRSKRVRGSKKTQEGSEKAEVSASAGEAAAVTEEK

Annotated regions:
phrase: IETTEAKAKETRKYVEKIITKA
type: CONSERVED_SITE
name: Ribosomal_bL17_CS
description: Large ribosomal subunit protein bL17, conserved site
Protein sequence:
MAATEQSLAPAGSSAPPSGKEEGAGPSSGTEGDPAGSSSTPEAPSIPDSSNPSATVPEANVKPPAAGSAALDLPIGPAPQGPAPVAEASPRSPPGPGGSRPGPETFRQRFRQFRYQDAAGPREAFRQLRELSRQWLRPDIRTKEQIVEMLVQEQLLAILPEAARARRLRRRTDVRITG

Annotated regions:
phrase: PETFRQRFRQFRYQDAAGPREAFRQLRELSRQWLRPDIRTKEQIVEMLVQEQLLAILPEAARARRLRRRTDVRI
type: DOMAIN
name: SCAN_dom
description: SCAN domain

phrase: RQRFRQFRYQDAAGPREAFRQLRELSRQWLRPDIRTKEQIVEMLVQEQLLAILPEAAR
type: DOMAIN
name: SCAN_dom
description: SCAN domain

phrase: ETFRQRFRQFRYQDAAGPREAFRQLRELSRQWLRPDIRTKEQIVEMLVQEQLLAILP
type: DOMAIN
name: SCAN_dom
description: SCAN domain

phrase: PETFRQRFRQFRYQDAAGPREAFRQLRELSRQWLRPDIRTKEQIVEMLVQEQLLAILPEAAR
type: DOMAIN
name: SCAN_dom
description: SCAN domain
Protein sequence:
MKHSLATIEQAIEAIKAGKMIILLDNEDRENEGDLVMAAEFVTAKDINFMSRYGCGLICLPMADELIDKLQLPMMTTRNKSPYGTAFTVSIEAAQGVSTGISAQDRAHTIQVAIQPESKPDDIISPGHVFPLRARSKGVLEREGQTEGSVDLARLAGLIPAAVICEIINEDGTMSRKQELHKFSQQHQIPMITIKDLIDYRIRNEVLIKEEVTTTIPLHEHGLFNMTVFSNSLDDAEHFVLIKPPVVPNQVPLVRIHSECITGDVFHSCKCDCGHQLEHSLALIAKEGGVLIYLRQEGRGIGLVNKLKAYALQDQLGLDTVEANLQLGLPADKRDYAIAYQILRHLGINAIRLLTNNPLKIEAIERFGIQVQERIPLEMAATEENKEYLKTKKNKLGHFLTI

Annotated regions:
phrase: VTTTIPLHEHGLFNMTVFSNSLDDAEHFVLIKPPVVPNQVPLVRIHSECITGDVFHSCKCDCGHQLEHSLALIAKEGGVLIYLRQEGRGIGLVNKLKAYALQDQLGLDTVEANLQLGLPADKRDYAIAYQILRHLGINAIRLLTNNPLKIEAIERFGIQVQERI
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
SIINMDGSHKQEDLEVISTGSLGLDLALGVGGLPRGRVVEIFGPESSGKTTLCLESIAQCQKNGGVCAFIDAEHAFDPIYARKLGVKVEELYLSQPDTGEQALEICDTLVRSGGVDMVVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGHIKRTNTLVVFINQIRMKIGVVYGSPETTTGGNALKFYASVRLDIRRAGQIKKGDEILGNETKVKVIKNKVAPPFRQAEFDILYGEGISWEGELIDIGVKHDIIDKSGAWYSYNDTK

Annotated regions:
phrase: DLEVISTGSLGLDLALGVGGLPRGRVVEIFGPESSGKTTLCLESIAQCQKNGGVCAFIDAEHAFDPIYARKLGVKVEELYLSQPDTGEQALEICDTLVRSGGVDMVVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGHIKRTNTLVVFINQ
type: DOMAIN
name: RecA_ATP-bd
description: DNA recombination and repair protein RecA-like, ATP-binding domain

phrase: GSHKQEDLEVISTGSLGLDLALGVGGLPRGRVVEIFGPESSGKTTLCLESIAQCQKNGGVCAFIDAEHAFDPIYARKLGVKVEELYLSQPDTGEQALEICDTLVRSGGVDMVVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGHIKRTNTLVVFINQIRMKIGVVYGSPETTTGGNALKFYASVRLDIRRAGQIKKGDEILGNETKVKVIKNKVAPPFRQAEFDILYGEGI
type: DOMAIN
name: RecA-like_N
description: RecA-like, N-terminal

phrase: GVVYGSPETTTGGNALKFYASVRLDIRRAGQIKKGDEILGNETKVKVIKNKVAPPFRQAEFDILYGEGISWEG
type: DOMAIN
name: RecA_monomer-monomer_interface
description: DNA recombination and repair protein RecA, monomer-monomer interface

phrase: ALKFYASV
type: CONSERVED_SITE
name: DNA_recomb/repair_RecA_CS
description: DNA recombination/repair protein RecA, conserved site

phrase: RGRVVEIFGPESSGKTTLCLESIAQCQKNGGVCAFIDAEHAFDPIYARKLGVKVEELYLSQPDTGEQALEICDTLVRSGGVDMVVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGHIKRTNTLVVFINQIRMKIGVVYGSPETTTGGNALKFYASVRLDIRRA
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: GELIDIGVKHDIIDKSGAWYSYNDT
type: DOMAIN
name: RecA-like_C
description: RecA-like, C-terminal
Protein sequence:
MTLKARIIPCLDVKDGRVVKGVNFVDLIDAGDPVEAAKAYDAAGADELCFLDITASSDNRDTIFDVVSRTADHCFMPVTVGGGVRSVADIRKLLLCGADKVSINSAAVKDPDFVAQAADKFGNQCIVVSIDAKRVSKDGEADRWEIFTHGGRQPTGIDAVEFAIKMVERGAGELLVTSMDRDGTKSGYDIGLTRSIADQVRVPVIASGGVGTLDDLVAGVRDGHATAVLAASIFHFGTYSIGEAKSYMAEHGIAMRLD

Annotated regions:
Protein sequence:
MCDDDIAALVIDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGGQAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSYTVPIYEGYALPHAILRLDLAGRDITDYLMKILTERGYTFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETCYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF

Annotated regions:
phrase: LLTEAPLNPKAN
type: CONSERVED_SITE
name: Actin/actin-like_CS
description: Actin/actin-like conserved site

phrase: WISKQEYD
type: CONSERVED_SITE
name: Actin_CS
description: Actin, conserved site
Protein sequence:
MAPSPAAAMPLAAEPDEVVVEVEEEEERGVKGGGGVAGLDEVEGLVVGSYCHDVLLRGGRVVGETLGGAAAFVSNVLDAASPAGASLAVVSKVGHDFAYATAAAPARHPPVLCASPTTSFHARFSDDAASAHAPDRQLRRVHACDPIYPADLPDRRFAYGLAVGVAGEVLPETLERMIRLCRAVLVDAQALIRAFDGEAKGGGAVRHVALEATPYARLLPRVAFLKASSEEAPYVGVETARRRCCVIVTEGRDGCRLYWDGGEARVAPFPAVQVDPTGAGDSFLAGFASGLLWGLSATDAALLGNFFGAAAVSQVGVPTFDPKMLQAVKQILEKAVKRPCTHINGNTFTFQRSSMHDELHKSLQEAAMLVCEQKQANSPATDNGDVCSINELTSLPS

Annotated regions:
phrase: VIVTEGRDGCRLYWDGGEARVAPFPAVQVDPTGAGDSFLAGFASGLLWGLSATDAALLGNFFGAAAVSQVGVP
type: DOMAIN
name: PfkB_dom
description: Carbohydrate kinase PfkB

phrase: DPTGAGDSFLAGF
type: CONSERVED_SITE
name: Carboh/pur_kinase_PfkB_CS
description: Carbohydrate/purine kinase, PfkB, conserved site
Protein sequence:
MTKENYFKVGTIVNTHGIRGEVKIMAITDFAADRFKKGAALQIETKQGFVPVTVQSSRLHKNMWLVLFEGVTNINEIEKYKTNDIYVYGEAREALGDDEYYYDEIIDSRVVSLSGEAIGVVSEIMTTGANDVWVVKRPGQSDALIPMIDDVVKSVDVANKLITIDVLEGLLD

Annotated regions:
phrase: VGTIVNTHGIRGEVKIMAITDFAADRFKKGAALQIETKQGFVPVTVQSSRLHKNMWLVLFEGVTNINEIEKYKTNDIY
type: DOMAIN
name: RimM_N
description: RimM, N-terminal

phrase: DDEYYYDEIIDSRVVSLSGEAIGVVSEIMTTGANDVWVVKRPGQSDALIPMIDDVVKSVDVANKLITIDVLEGL
type: DOMAIN
name: PRC-brl_dom
description: PRC-barrel domain
Protein sequence:
MSITPREIVSELDAHIIGQTEAKRAVAIALRNRWRRMQLSEDLRQEVTPKNILMIGPTGVGKTEIARRLAKLAQAPFIKVEATKFTEVGYVGKEVDSIIKDLTEVSMKLVKEQAVEKNRIRAQDAAEDRILDVLLPPAKDQWGNVQETDNASTRQIFRKKLREGSLDDKEIDIDVASQVNVEIMTPPGMEEMTSQLQSLFEGMSPNKTQKRKMKIKDALKVMLDEEAAKLVNQEELKQQAIEAVEQHGIVFIDEIDKICKKSGNSGGDVSREGVQRDLLPIIEGSTVNTKYGMVKTDHILFICSGAFQIARPSDLLPELQGRLPIHVELKSLTKADFERILTEPNASLTLQYRELMKTEGVTIEFTQDGISKIAESAFRVNEKTENIGARRLHTVLERLMDGISFDANERAGEHIVIDEKYVATALNDVVENEDLSRFIL

Annotated regions:
phrase: TPKNILMIGPTGVGKTEIARRLAKLAQAPFIKVEATKFTEVGYVGKEVDSIIKDLTEVSMKLVKEQAVEKNRIRAQDAAEDRILDVLLPPAKDQWGNVQETDNASTRQIFRKKLREGSLDDKEIDIDVASQVNVEIMTPPGMEEMTSQLQSLFEGMSPNKTQKRKMKIKDALKVMLDEEAAKLVNQEELKQQAIEAVEQHGIVFIDEIDKICKKSGNSGGDVSREGVQRDLLPIIEGSTVNTKYGMVKTDHILFICSGAFQIARPSDLLPELQGRLPIHVE
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VNVEIMTPPGMEEMTSQLQSLFEGMSPNKTQKRKMKIKDALKVMLDEEAAKLVNQEELKQQAIEAVEQHGIVFIDEIDKICKKSGNSGGDVSREGVQRDLLPIIEGSTVNTKYGMVKTDHILFICSGAFQIARPSDLLPELQGRLP
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: ILMIGPTGVGKTEIARRLAKLAQAPFIKVEATKFTEVGYVGKEVDSIIKDLT
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: LTKADFERILTEPNASLTLQYRELMKTEGVTIEFTQDGISKIAESAFRVNEKTENIGARRLHTVLERLMDGISFDANERAGEHIVIDEKYVATA
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal
Protein sequence:
MRIWWLLLAIEICTGNINSQDTCRQGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGRPGSPGKDGTSGEKGERGADGKVEAKGIKGDQGSRGSPGKHGPKGLAGPMGEKGLRGETGPQGQKGNKGDVGPTGPEGPRGNIGPLGPTGLPGPMGPIGKPGPKGEAGPTGPQGEPGVRGIRGWKGDRGEKGKIGETLVLPKSAFTVGLTVLSKFPSSDMPIKFDKILYNEFNHYDTAAGKFTCHIAGVYYFTYHITVFSRNVQVSLVKNGVKILHTKDAYMSSEDQASGGIVLQLKLGDEVWLQVTGGERFNGLFADEDDDTTFTGFLLFSSP

Annotated regions:
phrase: ETLVLPKSAFTVGLTVLSKFPSSDMPIKFDKILYNEFNHYDTAAGKFTCHIAGVYYFTYHITVFSRNVQVSLVKNGVKILHTKDAYMSSEDQASGGIVLQLKLGDEVWLQVTGGERFNGLFADEDDDTTFTGFLLFS
type: DOMAIN
name: C1q_dom
description: C1q domain

phrase: LVLPKSAFTVGLTVLSKFPSSDMPIKFDKILYNEFNHYDTAAGKFTCHIAGVYYFTYHITVFSRNVQVSLVKNGVKILHTKDAYMSSEDQASGGIVLQLKLGDEVWLQVTGGERFNGLFADEDDDTTFTGFLLFSS
type: DOMAIN
name: C1q_dom
description: C1q domain

phrase: AFTVGLTVLSKFPSSDMPIKFDKILYNEFNHYDTAAGKFTCHIAGVYYFTYHITVFSRNVQVSLVKNGVKILHTKDAYMSSEDQASGGIVLQLKLGDEVWLQVTGGERFNGLFADEDDDTTFTGFL
type: DOMAIN
name: C1q_dom
description: C1q domain

phrase: FPSSDMPIKFDKILYNEFNHYDTAAG
type: DOMAIN
name: C1q_dom
description: C1q domain

phrase: FTCHIAGVYYFTYHITVFS
type: DOMAIN
name: C1q_dom
description: C1q domain

phrase: DQASGGIVLQLKLGDEVWLQV
type: DOMAIN
name: C1q_dom
description: C1q domain

phrase: DDTTFTGFLL
type: DOMAIN
name: C1q_dom
description: C1q domain

phrase: QGHPGIPGNPGHNGLPGRDGRDGAKGDKGDAGEPGRPGSPGKDGTSGEKGERGADG
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: GPTGPEGPRGNIGPLGPTGLPGPMGPIGKPGPKGEAGPTGPQGEPGVRGIRGWKGDRG
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: GSPGKHGPKGLAGPMGEKGLRGETGPQGQKGNKGDVGPTGPEGPRGNIGPL
type: REPEAT
name: Collagen
description: Collagen triple helix repeat
Protein sequence:
MTMQLGLTLVVGVALCLVFGQPLRQVPERPFSVLWNVPSARCEAHFGVHLPLSTLSIVANHGQHFHGQNITIFYKNQFGLYPYFGPRGTAHNGGIPQAVSLDRHLAQAAHQILHSLGSSFAGLAVLDWEEWYPLWSGNWGPHRQVYQAASWAWAQRVFPDLGPQDQLHKAHTGFEQAARALMEQTLHLGRTLRPHGLWGFYRYPACGNGWHNMAANYTGHCHAATITRNNQLHWLWAASSAIYPSIYLPPRLPAAYQQAFVRHRLEEAFRVALVGHTHPLPVLAYARLTSRSSGKFLSLDDLVRTIGVSAALGAAGVVLWGDLSFSSSEEECWRLHDYLVSTLGPYVINVTKAAMACSHQRCHGHGRCARRDPGQTKAFLHVKPDGSLGAWKSFRCRCYLGWAGPTCQKPEPKEAT

Annotated regions:
phrase: CRCYLGWAGPT
type: DOMAIN
name: EGF-like_dom
description: EGF-like domain

phrase: CRCYLGWAGPT
type: DOMAIN
name: EGF-like_dom
description: EGF-like domain
Protein sequence:
MEIFQAAILGIIEGLTEFLPISSTGHLIVVSDWLGIEQTKQNTAFEVIIQVAAILAIFSHYKEKFSLQHLRLWNNVLIAFLPIAIIGFIFQDTVKAFFTIETVAWFFIIGGLIFLIMEKLYVDGKHRTQDIEDLTMRQAFWIGIIQVFALIPGTSRAGASIVGGVMMGLDRKTAAEFSFLLALPVLMAASGLDLLKHYEDFNNTSWTPLMVGFLMAFLAAWLTIKVFIKFLQTFTFNAFGVYRIVFGIVLLIWFV

Annotated regions:
Protein sequence:
MAIDPYRHLLRPLLFSGLQADPELLHQQFLSLCGWLNQDRSLCTWLRQQLQQWYALSDPRLERQVWGLRFPNPIGLAAGFDKNGVARSVWSAFGFGFAELGTVTWHPQPGNPRPRLFRLGSDRAVINRMGFNNAGAEAMAASLERSPPASIPIGINLGKSKITPLAAAKEDYLASFRRLHPLGDYFVINVSSPNTPGLRDLQAKEQLAPILETLQSANHPRKPLLLKIAPDLSWEQIAAILDLVQAYELAGIVATNTTVAREGLKSQTIPQTGRSPAEEAGGLSGAPLRQRATAVIRFIHEQTQGTLPIIGVGGIFTPEDVIEKLAAGATLVQLYTGWIYQGPSLLRELLKGLLAAADQETPEK

Annotated regions:
phrase: GFAELGTVTWHPQPGNPRP
type: CONSERVED_SITE
name: Dihydroorotate_DH_CS
description: Dihydroorotate dehydrogenase, conserved site

phrase: LERQVWGLRFPNPIGLAAGFDKNGVARSVWSAFGFGFAELGTVTWHPQPGNPRPRLFRLGSDRAVINRMGFNNAGAEAMAASLERSPPASIPIGINLGKSKITPLAAAKEDYLASFRRLHPLGDYFVINVSSPNTPGLRDLQAKEQLAPILETLQSANHPRKPLLLKIAPDLSWEQIAAILDLVQAYELAGIVATNTTVAREGLKSQTIPQTGRSPAEEAGGLSGAPLRQRATAVIRFIHEQTQGTLPIIGVGGIFTPEDVIEKLAAGATLVQLYTGWIYQGPSLLRELLKGL
type: DOMAIN
name: Dihydroorotate_DH_cat
description: Dihydroorotate dehydrogenase, catalytic

phrase: IIGVGGIFTPEDVIEKLAAG
type: CONSERVED_SITE
name: Dihydroorotate_DH_CS
description: Dihydroorotate dehydrogenase, conserved site
Protein sequence:
MASGLGDLSVGVSSLPMRELAWRRVADDSHDLWCCCMDWKAHVEYAHPASELRPGSGGWPEHAEAQWRQQVHAAHDVWCNCGDWQGHALRSRSRTAESGRSSSSSSVSVLSDGDQQPWWRRLRVKRPKFPSWARRWTQRHDSEERASQQAENDSTS

Annotated regions:
Protein sequence:
MKMKKSLVALCLTAGLFASVPGISLAEVNYVPQNTSAAPVIPAAALQQLTWTPVDQSKTQSTQLATGGQRLDVAGITGPVAAYSVPANIGELTLTLTSEVNKQASVFAPNVLILDQNMTPSAFFPSSYFTYQQPGVMSADRLEGVMRLTPALGQQKLYVLVFTTEKDLQQTTTLLDPAKAYAKGVGNSIPDIPDPVARHTTDGVVKLKVKTNSSSSVLVGPLFGSSGTGPVTVGNTAAPVAAPAPVAPKKSEPMLNDTESYFNKAIKDAVAKGDVDKALKLLDEAERLGSTSARSTFISSVKGKG

Annotated regions:
Protein sequence:
MGRMFGTDGVRGVANTELTARIAYDLGRAGAYVLTEGAHKPKILVAKDTRISGDMLESALIAGILSVGAEAIVLGVVPTPAVAYLTRKYGADAGVMISASHNPVEYNGIKFFNDKGYKLSDELEDEIQRVIESDFEGVPSPTGTDLGRETIEVSALDDYIEFAKNTIPYSLKGLKIALDCANGAAYKSSVKAFRELGADVFVINDNPDGTNINENCGSTHPEELMEYVIKKKCDLGFAFDGDADRCLAVDEKGNLINGDFILMLCAKYLKELGKLKDDTLVVTVMSNLGLDIACKNEKINIVKTAVGDRYVLEEMVKNKYVLGGEQSGHVIFLDYNSTGDGLVTALQIAGIVKKKEKALSELCSIMKELPQVLANATIPNDKKDLYLTDDEIQNEIRKIEEALNGVGRVLIRPSGTEPLVRVMLEGENQAEIDEMAHNLANLIEKKYN

Annotated regions:
phrase: RMFGTDGVRGVANTELTARIAYDLGRAGAYVLTEGAHKPKILVAKDTRISGDMLESALIAGILSVGAEAIVLGVVPTPAVAYLTRKYGADAGVMISASHNPVEYNGIKFFNDKGYKLSDELEDEIQRVIES
type: DOMAIN
name: A-D-PHexomutase_a/b/a-I
description: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I

phrase: GVMISASHN
type: CONSERVED_SITE
name: A-D-PHexomutase_CS
description: Alpha-D-phosphohexomutase, conserved site

phrase: DDYIEFAKNTIPYSLKGLKIALDCANGAAYKSSVKAFRELGADVFVINDNPDGTNINENCGSTHPEELMEYVIKKKCDLGFAFDGDADRCLAVDEK
type: DOMAIN
name: A-D-PHexomutase_a/b/a-II
description: Alpha-D-phosphohexomutase, alpha/beta/alpha domain II

phrase: ANATIPNDKKDLYLTDDEIQNEIRKIEEALNGVGRVLIRPSGTEPLVRVMLEGENQAEIDEMAHNLA
type: DOMAIN
name: A-D-PHexomutase_C
description: Alpha-D-phosphohexomutase, C-terminal

phrase: NGDFILMLCAKYLKELGKLKDDTLVVTVMSNLGLDIACKNEKINIVKTAVGDRYVLEEMVKNKYVLGGEQSGHVIFLDYNSTGDGLVTALQIAGIVKKKEKALSELCSIM
type: DOMAIN
name: A-D-PHexomutase_a/b/a-III
description: Alpha-D-phosphohexomutase, alpha/beta/alpha domain III
Protein sequence:
MAPSARNRKPGARSMAKAAALRKPKKKVNPLDKDGITYIDYKDTALLRKFISDRGKIRARRVTGVTSQQQRQIARAVKNAREMALLPYTATAR

Annotated regions:
phrase: IDYKDTALLRKFISDRGKIRARR
type: CONSERVED_SITE
name: Ribosomal_bS18_CS
description: Small ribosomal subunit protein bS18, conserved site
Protein sequence:
MPKFKTHTGAGKRFRVTGTGKLMRRRANRNHLLEHKPSRRTRRLWNEVPVAAADTARMRRLLGR

Annotated regions:
phrase: KTHTGAGKRFRVTGTGKLMRRRANRN
type: CONSERVED_SITE
name: Ribosomal_bL35_CS
description: Large ribosomal subunit protein bL35, conserved site
Protein sequence:
MQVFENITKMQEWAREQKKQGQSIALVPTMGYLHEGHLALVKEARRQCDKVVVSIFVNPIQFGAGEDFEQYPRDLEQDSALLEKERVDALFSPGIRDMYPGSFQTFVEVYGEITEKMCGASRPGHFKGVTTVVSKLFNICQPDRAYFGQKDAQQLMIVEKMVRELNFPLEIIRVPIVREKDGLAMSSRNVYLSPEERAEALVLYRALKMAEEEIKNGEREIGIIRQKMEEMIKACPRAAIDYIAINNANDLSELQTCAGKVLIALAVKFGKTRLIDNLIVEV

Annotated regions:
phrase: ALVPTMGYLHEGHLALVKEARRQCDKVVVSIFVNPIQFGAGEDFEQYPRDLEQDSALLE
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain