nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MKTSISLLMAGVIAVLAMLTHAEKNLQAASSVAEPDSLSVATFAGGCFWSLESGLEKFTGVHKVISGFSGGHIVNPSYDQVSKGGTGHVESVQVYYDPAVISYKTLLDAYWRQVDPTDDAGQFVDRGRQYRTVIFYNSQEQKEHAEKSRQLLSQSGRYSAPIVTEIKKFESFYPAADYHQNYSKINPLRYKYYRFRSGRDNYLKKIWGPELILKTGQDTAMNHYTKPSDEVLRNTLTPLQYQVTQEEDTEPPFKNTYWNEKREGIYVDVVSGEPLFSSRDKFDSGTGWPSFTRPLVADNILKKKDFLLVFPRTEVRSRHADSHLGHVFEDGPQPTGLRYCLNSASLRFIPVEEMEAAGYGEFLSRFQTENTR

Annotated regions:
phrase: KPSDEVLRNTLTPLQYQVTQEEDTEPPFKNTYWNEKREGIYVDVVSGEPLFSSRDKFDSGTGWPSFTRPLVADNILKKKDFLLVFPRTEVRSRHADSHLGHVFEDGPQPTGLRYCLNSASLRFIPVEEMEAAG
type: DOMAIN
name: Met_Sox_Rdtase_MsrB_dom
description: Peptide methionine sulphoxide reductase MrsB domain

phrase: ATFAGGCFWSLESGLEKFTGVHKVISGFSGGHIVNPSYDQVSKGGTGHVESVQVYYDPAVISYKTLLDAYWRQVDPTDDAGQFVDRGRQYRTVIFYNSQEQKEHAEKSRQLLSQSGRYSAPIVTEIKKFESFYPAADYHQNYSKINPLR
type: DOMAIN
name: Met_Sox_Rdtase_MsrA_dom
description: Peptide methionine sulphoxide reductase MsrA domain

phrase: LSVATFAGGCFWSLESGLEKFTGVHKVISGFSGGHIVNPSYDQVSKGGTGHVESVQVYYDPAVISYKTLLDAYWRQVDPTDDAGQFVDRGRQYRTVIFYNSQEQKEHAEKSRQLLSQSGRYSAPIVTEIKKFESFYPAADYHQNYSKINPLRYKYYRFR
type: DOMAIN
name: Met_Sox_Rdtase_MsrA_dom
description: Peptide methionine sulphoxide reductase MsrA domain

phrase: TKPSDEVLRNTLTPLQYQVTQEEDTEPPFKNTYWNEKREGIYVDVVSGEPLFSSRDKFDSGTGWPSFTRPLVADNILKKKDFLLVFPRTEVRSRHADSHLGHVFEDGPQPTGLRYCLNSASLRFIP
type: DOMAIN
name: Met_Sox_Rdtase_MsrB_dom
description: Peptide methionine sulphoxide reductase MrsB domain

phrase: DEVLRNTLTPLQYQVTQEEDTEPPFKNTYWNEKREGIYVDVVSGEPLFSSRDKFDSGTGWPSFTRPLVADNILKKKDFLLVFPRTEVRSRHADSHLGHVFEDGPQPTGLRYCLNSASLRFIP
type: DOMAIN
name: Met_Sox_Rdtase_MsrB_dom
description: Peptide methionine sulphoxide reductase MrsB domain

phrase: ATFAGGCFWSLESGLEKFTGVHKVISGFSGGHIVNPSYDQVSKGGTGHVESVQVYYDPAVISYKTLLDAYWRQVDPTDDAGQFVDRGRQYRTVIFYNSQEQKEHAEKSRQLLSQSGRYSAPIVTEIKKFESFYPAADYHQNYSKINPLRY
type: DOMAIN
name: Met_Sox_Rdtase_MsrA_dom
description: Peptide methionine sulphoxide reductase MsrA domain

phrase: LTPLQYQVTQEEDTEPPFKNTYWNEKREGIYVDVVSGEPLFSSRDKFDSGTGWPSFTRPLVADNILKKKDFLLVFPRTEVRSRHADSHLGHVFEDGPQPTGLRYCLNSASLRFI
type: DOMAIN
name: Met_Sox_Rdtase_MsrB_dom
description: Peptide methionine sulphoxide reductase MrsB domain
Protein sequence:
MSPKTETKASVGFKAGVKDYRLTYYTPEYETLATDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVAGEENQYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYSKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKAQAETGEIKGHYLNATAGTSEEMMKRAVCARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHIHAGTVVGKLEGERDVTLGFVDLLRDDFIEKDRSRGIYFTQDWVSMPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNEVIREASKWSPELAAACEVWKEIKFEFEAMDVL

Annotated regions:
phrase: GIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKAQAETGEIKGHYLNATAGTSEEMMKRAVCARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHIHAGTVVGKLEGERDVTLGFVDLLRDDFIEKDRSRGIYFTQDWVSMPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNEVIREASKWSPELAAACEV
type: DOMAIN
name: RuBisCO_lsu_C
description: Ribulose bisphosphate carboxylase, large subunit, C-terminal

phrase: GLDFTKDD
type: ACTIVE_SITE
name: RuBisCo_large_chain_AS
description: Ribulose bisphosphate carboxylase, large chain, active site

phrase: YYTPEYETLATDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVAGEENQYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPA
type: DOMAIN
name: RuBisCO_lsu_fd_N
description: Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal
Protein sequence:
MPELPEVETSRRGIAPFLQGKTLSHLTVRQPRLRWPVSETLLTLRDRPILSVQRRAKYLLLELPEGWIVIHLGMSGSVRILPALTPPQKHDHIDLLLTDGMMLRYTDPRRFGAWLWYDSLATASVLAHLGPEPLSEAFSAEYLLEKARGRRTAVKPWLMDNTLVVGVGNIYASESLFSAQIHPDRLAGSLSADEAHLLVQTIKAVLQRSIDQGGTTLRDFLQADGKPGYFAQQLQVYGRAGEACLTCGTTIKRSKHGQRTTFYCPHCQR

Annotated regions:
phrase: LGPEPLSEAFSAEYLLEKARGRRTAVKPWLMDNTLVVGVGNIYASESLFSAQIHPDRLAGSLSADEAHLLVQTIKAVLQRSIDQGGTTLRDF
type: DOMAIN
name: DNA_glyclase/AP_lyase_DNA-bd
description: DNA glycosylase/AP lyase, H2TH DNA-binding

phrase: CLTCGTTIKRSKHGQRTTFYCPHC
type: BINDING_SITE
name: DNA_glyclase_Znf_dom_DNA_BS
description: DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site

phrase: GEACLTCGTTIKRSKHGQRTTFYCPHC
type: DOMAIN
name: Znf_FPG/IleRS
description: Zinc finger, FPG/IleRS-type

phrase: MPELPEVETSRRGIAPFLQGKTLSHLTVRQPRLRWPVSETLLTLRDRPILSVQRRAKYLLLELPEGWIVIHLGMSGSVRILPALTPPQKHDHIDLLLTDGMMLRYTDPRRFGA
type: DOMAIN
name: FPG_cat
description: Formamidopyrimidine-DNA glycosylase, catalytic domain

phrase: PELPEVETSRRGIAPFLQGKTLSHLTVRQPRLRWPVSETLLTLRDRPILSVQRRAKYLLLELPEGWIVIHLGMSGSVRILPALTPPQKHDHIDLLLTDGMMLRYTDPRRFGAW
type: DOMAIN
name: FPG_cat
description: Formamidopyrimidine-DNA glycosylase, catalytic domain

phrase: LGPEPLSEAFSAEYLLEKARGRRTAVKPWLMDNTLVVGVGNIYASESLFSAQIHPDRLAGSLSADEAHLLVQTIKAVLQRSIDQGGTTLR
type: DOMAIN
name: DNA_glyclase/AP_lyase_DNA-bd
description: DNA glycosylase/AP lyase, H2TH DNA-binding

phrase: PELPEVETSRRGIAPFLQGKTLSHLTVRQPRLRWPVSETLLTLRDRPILSVQRRAKYLLLELPEGWIVIHLGMSGSVRILPALTPPQKHDHIDLLLTDGMMLRYTDPRRF
type: DOMAIN
name: FPG_cat
description: Formamidopyrimidine-DNA glycosylase, catalytic domain

phrase: QVYGRAGEACLTCGTTIKRSKHGQRTTFYCPHCQ
type: DOMAIN
name: Znf_DNA_glyclase/AP_lyase
description: Zinc finger, DNA glycosylase/AP lyase-type
Protein sequence:
MDRIIDTAATSEDEAIEVSIRPKRLADYLGQQPVREQMDIYIQATKARAEALDHVLIFGPPGLGKTTLSHVIAYELGVKLRVTSGPVIEKAGDLAALLTNLQPYDVLFIDEIHRLSPVVEEVLYPAMEDFQIDIMIGEGPAARSIKIDLPPFTLIGATTRTGLLTAPLRDRFGIVQRLEFYSPEDLARIVRRSAGILNIDCTTEGAAEIAQRARGTPRIANRLLRRVRDYAEVKAGGQITIEVAQAAMQMLKVDQGGFDELDRRLLHTIVEYFDGGPVGIESLAASLSEERGTLEDVVEPYLIQQGFLVRTARGRMATDKAYQHLALQPRERVSAFTDPEDLF

Annotated regions:
phrase: YSPEDLARIVRRSAGILNIDCTTEGAAEIAQRARGTPRIANRLLRRVRDYAEVKAGGQITIEVAQAAMQMLKV
type: DOMAIN
name: AAA_lid_4
description: RuvB, AAA lid domain

phrase: ALDHVLIFGPPGLGKTTLSHVIAYELGVKLRVTSGPVIEKAGDLAALLTNLQPYDVLFIDEIHRLSPVVEEVLYPAMEDFQIDIMIGEGPAARSIKIDLPPFTLIGATTRTGLLTAPLRDRFGIVQRLEFY
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: IRPKRLADYLGQQPVREQMDIYIQATKARAEALDHVLIFGPPGLGKTTLSHVIAYELGVKLRVTSGPVIEKAGDLAALLTNLQPYDVLFIDEIHRLSPVVEEVLYPAMEDFQIDIMIGEGPAARSIKIDLPPFTLIGATTRTGLLTAPLRDRFGIVQR
type: DOMAIN
name: RuvB-like_N
description: RuvB-like P-loop domain

phrase: GGFDELDRRLLHTIVEYFDGGPVGIESLAASLSEERGTLEDVVEPYLIQQGFLVRTARGRMATDKAYQH
type: DOMAIN
name: RuvB_C
description: RuvB C-terminal winged helix domain
Protein sequence:
MLTRKQHDLLLFIHNRLSVSGISPSFEEMKLALDLKSKSGIHRLIKALEERGFIRRLPNRARALEVIRLPEDKTEIQKKISRDYTPPKADNDVIEIPLHGRIAAGLPIEALEGQSHLAVPPSYLGSGAHYALEVAGDSMVDAGIFDGDYIIVRQTDEAHEGEIVVALIDNSDATLKYFHREGRMVRLDPANRAYAPMRYDASRIGIQGRLVGLLRRY

Annotated regions:
phrase: PLHGRIAAGLPIEALEGQSHLAVPPSYLGSGAHYALEVAGDSMVDAGIFDGDYIIVRQTDEAHEGEIVVALIDNSDATLKYFHREGRMVRLDPANRAYAPMRYDASRIGIQGRL
type: DOMAIN
name: Peptidase_S24_S26A/B/C
description: Peptidase S24/S26A/S26B/S26C

phrase: LTRKQHDLLLFIHNRLSVSGISPSFEEMKLALDLKSKSGIHRLIKALEERGFIRRLPNRAR
type: DOMAIN
name: LexA_DNA-bd_dom
description: LexA repressor, DNA-binding domain

phrase: YALEVAGDSMVDAGIFDGDYIIVRQTDEAHEGEIVVALIDNSDATLKYFHREGRMVRLDPANRAYAPMRYDASRIGIQGRL
type: DOMAIN
name: LexA-like
description: LexA-like
Protein sequence:
MGLTISSLFSRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEGAEELQKMLQEDELRDAVLLLFANKQDLPNAMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDWLSNELSKR

Annotated regions:
phrase: KQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNICFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERIQEGAEELQKMLQEDELRDAVLLLFANKQDLPNAMAISEM
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain
Protein sequence:
MNYTTQMDAAKKGIVTKEMEIVAKKENMNVKDLMELVSKGKVAIPANKNHKSLDPEGIGQGLRTKINVNLGISKDCYNIDMELEKVQKAIDMKAEAIMDLSCFGKTEEFRKRLIDMSPAIIGTVPIYDAVGFYDKELKDITSEEFLKVAEKHAENGADFLTIHVGMNRKTAATFKKNPRRMNIVSRGGSLLYAWMELNNKENPFYEGFNKLLDICEKYDVTLSLGDACRPGCIEDSTDASQIEELIALGELTKRAWERNVQVIIEGPGHMTLDEIETNMKIEKKLCHGAPFYVLGPIVTDIAPGYDHITSAIGGAIAATHGADFLCYVTPAEHLRLPNLDDMKEGIIATKIAAHAADLAKGVKGARDWDNAMAKARRDLDWERMFELSIDEEKARRYREESKAKSKDSCTMCGKMCAVRNMNRVTEGKDLNMLRDDD

Annotated regions:
Protein sequence:
MNILIKSAVKNFIVFSTALYTSFSFAQSKLAIVIDDVGYHLKEDAAIFAMPREISVAIIPAAPYARARNQEAKSQGRDILIHMPMQPVSAVKIEDGGLHLGMSAAQVNDRVNTAKNIVRDAIGMNNHMGSAATADPQLMTYLMTALQEKHLFFLDSRTIGKSVAGKIAKEQGVRSLDRHIFLDDSNEFADVQRQFKAAIHYARKHGSAIAIGHPRPNTIAVLQAGLRNLPEDIQLVGMGNLWRNEKVIPPKPFILLFSEVPAPTSIEPFEPVGLLRGIPK

Annotated regions:
Protein sequence:
MKQLFLIIGAPGSGKTTDASIIANDNANITHYSTGDLLRAEVASGSELGKTIDSFISKGNLVPLEVVVNTIITALKNAPTNTILIDGYPRSVEQMLEFDKVLKNQSEVNLKGVIEVKVSEEVARERVLGRARGADDNEEVFNNRMKVYLEPLNEITNFYAKENIHHIINGERSIEAIVADMKNLINELLK

Annotated regions:
phrase: ILIDGYPRSVE
type: CONSERVED_SITE
name: Adenylat_kinase_CS
description: Adenylate kinase, conserved site
Protein sequence:
MAQQAPDREKALELAMAQIDKNFGKGSVMRLGEEVRQPISVIPTGSISLDVALGIGGLPRGRVIEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQPDTGEQALEIADMLVRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRLDVRRIETLKDGTDAVGNRTRVKVVKNKVSPPFKQAEFDILYGQGISREGSLIDMGVEHGFIRKSGSWFTYEGEQLGQGKENARKFLLENTDVANEIEKKIKEKLGIGAVVTAEADDVLPAPVDF

Annotated regions:
phrase: GSLIDMGVEHGFIRKSGSWFTYEGEQLGQGKENARKFLLENTDVANEIEKKIKEKL
type: DOMAIN
name: RecA-like_C
description: RecA-like, C-terminal

phrase: KALELAMAQIDKNFGKGSVMRLGEEVRQPISVIPTGSISLDVALGIGGLPRGRVIEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQPDTGEQALEIADMLVRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRLDVRRIETLKDGTDAVGNRTRVKVVKNKVSPPFKQAEFDILYGQGI
type: DOMAIN
name: RecA-like_N
description: RecA-like, N-terminal

phrase: ALKFYASV
type: CONSERVED_SITE
name: DNA_recomb/repair_RecA_CS
description: DNA recombination/repair protein RecA, conserved site

phrase: RGRVIEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQPDTGEQALEIADMLVRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRLDVRRI
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: GVMFGSPETTTGGKALKFYASVRLDVRRIETLKDGTDAVGNRTRVKVVKNKVSPPFKQAEFDILYGQGISREG
type: DOMAIN
name: RecA_monomer-monomer_interface
description: DNA recombination and repair protein RecA, monomer-monomer interface

phrase: PISVIPTGSISLDVALGIGGLPRGRVIEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLGVDTDSLLVSQPDTGEQALEIADMLVRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTGALNNSGTTAIFINQ
type: DOMAIN
name: RecA_ATP-bd
description: DNA recombination and repair protein RecA-like, ATP-binding domain
Protein sequence:
MPHSSSGAPLDPVAFIHSQIRTVPDWPQPGVMFRDITTLLQSPKALRILVDLFVERYVDAKLDYVAGLDARGFIIAPIVAYELSVGFVPIRKVGKLPYKTRSESYDLEYGSATVEIHEDACRPGDRVIIMDDLIATGGTMMAGRNLLQRLGAEVVEGAAIIDLPDLGGSALLRNAGLPVYTVTEFAGH

Annotated regions:
phrase: TTLLQSPKALRILVDLFVERYVDAKLDYVAGLDARGFIIAPIVAYELSVGFVPIRKVGKLPYKTRSESYDLEYGSATVEIHEDACRPGDRVIIMDDLIATGGTMMAGRNLLQRLGAEVVEGAAII
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: ALRILVDLFVERYVDAKLDYVAGLDARGFIIAPIVAYELSVGFVPIRKVGKLPYKTRSESYDLEYGSATVEIHEDACRPGDRVIIMDDLIATGGTMMAGRNLLQRLGAEVVEGAAIIDLPDLGGSALLRNAGLPVYT
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain
Protein sequence:
MNLFDLSILPFLNLAQVVNESRVPNVPDLLSVLPALVLATGGVFLICLSVLFKTKEFIIVRYVSGLILLLAFAAVFYTSFRFPGNGFHFSGQIENSVLSFWLNLIYISMAIGTAAIVPRILKNHKIEFPEFYPLLLFATCGMTLMTTGQDFILVFVALELMSICLYILIGMARSDLFSLEATLKYFLLGSFSSGFMLMGIAFLFGGSGSTNITEALKPLTIAGYQGNFAKIGLVLFITGVAFKIALFPYHAWTPDAYEGALTPVTGYMSTAAKAASIGLLLILYTKLPLPLENSTWAWLPGILALCSMIYGNLLALKQENLKRMLAYSSIAHAGYVVAGISAGIKEEVLFYLIVYSFMSLGAFAILAYLEEGTRQVTFFSVQSLSGVKPLTAIAINIFFMSLAGVPPFGGFWAKLFLFQKLAESETLMNRILLIGGVTNSALALYYYLRIGIATFMSSDEGEISRNHAAPYSVGVTGVVLFCLLMVSVGWFLLVPGNLLALGELWLSSSIFR

Annotated regions:
phrase: QDFILVFVALELMSICLYILIGMARSDLFSLEATLKYFLLGSFSSGFMLMGIAFLFGGSGSTNITEALKPLTIAGYQGNFAKIGLVLFITGVAFKIALFPYHAWTPDAYEGALTPVTGYMSTAAKAASIGLLLILYTKLPLPLENSTWAWLPGILALCSMIYGNLLALKQENLKRMLAYSSIAHAGYVVAGISAGIKEEVLFYLIVYSFMSLGAFAILAYLEEGTRQVTFFSVQSLSGVKPLTAIAINIFFMSLAGVPPFGGFWAKLFLFQKLAESETL
type: DOMAIN
name: ND/Mrp_TM
description: NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domain
Protein sequence:
MDYKDTLLLPNTTFAMRANLAELEPKRFDKWFENNYAYEKMKQKRQGVSESFTLHDGPPYANGHLHIGHALNKILKDIIIKMHYFQGKKVRFTPGWDCHGLPIEQQVEVKLKDKKQNLSKKQIRELCREHAREFVNIQRDEFKSLGVIADWDEPYLTMKNAFEADIYKALCKIAKKGLLLERSKPVFWSWAAKSALAEAEVEYEEKEDYSIYVAFNLDEASCKKLGVENAKAVIWTTTPWTLPANQAISLNPNEKYIITKEGYIFAKALLENMINKNFTQGEIQKELLGSEFENLSAINPLNQRKSTLILGEHVLMDGGTGLVHTAPGHGEDDYYACLKYNIEVIMPVDDGGYYDETLRAKGLLPEHLLAEFIGLHIFKANERILELLGEALLESSKFTHSYPFCWRTHKPVIYRATKQWFILMDEKKLDGKSLRELALEQLNSVKFYPESGVKRLSSMIENRPDWCISRQRDWGVPIAFFRDKKSQEVIFDDDVLDHLVGIFEKNGADAWWDLEIKDLLPPNSKYNPNNLEKVYDILDVWFDSGSTWEAVLNSARYDAGEYQASMYLEGSDQHRGWFQSSLLISTAINHKTPYKNILTHGFTVDEKGQKMSKSKGNVVLPQNVAKNYGVEILRLWIMLSDYSTDLKISDNILKQVSEQYRKIRNTIRFLLANTNDIEFVETKNFTLLDKWILMRAKIAFEICENAFEKYEFSKGFSVLLNFLSADLSGIYLDICKDRLYCNAKDDSKRVSAQSAMVLIARKLFALLA

Annotated regions:
phrase: RFDKWFENNYAYEKMKQKRQGVSESFTLHDGPPYANGHLHIGHALNKILKDIIIKMHYFQGKKVRFTPGWDCHGLPIEQQVEVKLKDKKQNLSKKQIRELCREHAREFVNIQRDEFKSLGVIADWDEPYLTMKNAFEADIYKALCKIAKKGLLLERSKPVFWSWAAKSALAEAEVEYEEKEDYSIYVAFNLDEASCKKLGVENAKAVIWTTTPWTLPANQAISLNPNEKYIITKEGYIFAKALLENMINKNFTQGEIQKELLGSEFENLSAINPLNQRKSTLILGEHVLMDGGTGLVHTAPGHGEDDYYACLKYNIEVIMPVDDGGYYDETLRAKGLLPEHLLAEFIGLHIFKANERILELLGEALLESSKFTHSYPFCWRTHKPVIYRATKQWFILMDEKKLDGKSLRELALEQLNSVKFYPESGVKRLSSMIENRPDWCISRQRDWGVPIAFFRDKKSQEVIFDDDVLDHLVGIFEKNGADAWWDLEIKDLLPPNSKYNPNNLEKVYDILDVWFDSGSTWEAVLNSARYDAGEYQASMYLEGSDQHRGWFQSSLLISTAINHKTPYKNILTHGFTVDEKGQKMSKSKGNVVLPQNVAKNYGVEILRLWIMLSDYSTDLKI
type: DOMAIN
name: aa-tRNA-synth_Ia
description: Aminoacyl-tRNA synthetase, class Ia

phrase: PYANGHLHIGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: ISDNILKQVSEQYRKIRNTIRFLLANTNDIEFVETKNFTLLDKWILMRAKIAFEICENAFEKYEFSKGFSVLLNFLSADLSGIYLDICKDRLYCNAKDDSKRVSAQSAMVLIARKLFALL
type: DOMAIN
name: Anticodon_Ile_BEm
description: Isoleucyl tRNA synthetase type 1, anticodon-binding domain

phrase: DKWILMRAKIAFEICENAFEKYEFSKGFSVLLNFLSADLSGIYLDICKDRLYCNAKDDSKRVSAQSAMVLIARKLFALL
type: DOMAIN
name: M/V/L/I-tRNA-synth_anticd-bd
description: Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
Protein sequence:
MAGAYDPSLPEVPEWLNKGDNAWQLTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLLCWVLLCYKMAFGEELLPFWGKGGPAFDQGYLKGQAKIPNSNVAAPYFPMATLVYFQFTFAAITTILVAGSVLGRMNIKAWMAFVPLWLIFSYTVGAYSIWGGGFLYQWGVIDYSGGYVIHLSSGVAGFVAAYWVGPRPKADRERFPPNNVLLMLAGAGLLWMGWSGFNGGAPYAANLTSSIAVLNTNLSAATSLLVWTTLDVIFFGKPSVIGAIQGMVTGLAGVTPGAGLIQTWAAIIIGVVSGTAPWASMMIIHKKSALLQKVDDTLAVFYTHAVAGLLGGIMTGLFAHPDLCVLVLPLPATRGAFYGGNGGKQLLKQLAGAAFIAVWNVVSTTIILLAIRVFIPLRMAEEELGIGDDAAHGEEAYALWGDGEKFDATRHVQQFERDQEAAHPSYVHGARGVTIVL

Annotated regions:
phrase: DYSGGYVIHLSSGVAGFVAAYWVGP
type: CONSERVED_SITE
name: Ammonium_transpt_CS
description: Ammonium transporter, conserved site

phrase: AWQLTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLLCWVLLCYKMAFGEELLPFWGKGGPAFDQGYLKGQAKIPNSNVAAPYFPMATLVYFQFTFAAITTILVAGSVLGRMNIKAWMAFVPLWLIFSYTVGAYSIWGGGFLYQWGVIDYSGGYVIHLSSGVAGFVAAYWVGPRPKADRERFPPNNVLLMLAGAGLLWMGWSGFNGGAPYAANLTSSIAVLNTNLSAATSLLVWTTLDVIFFGKPSVIGAIQGMVTGLAGVTPGAGLIQTWAAIIIGVVSGTAPWASMMIIHKKSALLQKVDDTLAVFYTHAVAGLLGGIMTGLFAHPDLCVLVLPLPATRGAFYGGNGGKQLLKQLAGAAFIAVWNVVSTTIILLAIRVFIPLRMAEEELGIGDDAAHGEEA
type: DOMAIN
name: NH4_transpt_AmtB-like_dom
description: Ammonium transporter AmtB-like domain
Protein sequence:
MTDIIRQLEAEQAAKIEEKRKLPDFQPGDTVRVQVRVTEGTRTRVQAYEGVCIARSGAGLNENFTVRKISYGEGVERVFPVYSPIVEGVELVRRGKVRRAKLYYLRGLTGKAARIAEKKDNRTKAEREADKAAAAKAEAAKAAAE

Annotated regions:
phrase: LVRRGKVRRAKLYYL
type: CONSERVED_SITE
name: Ribosomal_bL19_CS
description: Large ribosomal subunit protein bL19, conserved site
Protein sequence:
MISGKHILLVIGGGIAVYKSLELIRRLRDRGAEVTPVLTRAGAEFVTPLSVSALAGRKVFSDLWDLTDEAEMGHIELSRAADLVVVAPATADLMAKMAGGHADDLASTLLMATDKRVLIAPAMNVRMWEHPATRRNAERLAGDGILTVGPNEGNMACGEYGPGRMAEPMEILGAIESAFGTGPLSDRRIVVTSGPTHEPIDPVRYIANRSSGAQGAAIARALADLGAEVVFVTGPAEVSPPAGVEVVRVDTAEQMRNAVHEALPADAGIFCAAVADWRVTNASGQKVKKSPDGLPRLEFAENPDILAEISGLGSDRPSLVVGFAAETENVLENATAKRRRKGCDWLVANDVSAGTGIMGGTENKVTLITEDGPEDWPRMGKDAVARRLADRIAMTLSGD

Annotated regions:
phrase: KHILLVIGGGIAVYKSLELIRRLRDRGAEVTPVLTRAGAEFVTPLSVSALAGRKVFSDLWDLTDEAEMGHIELSRAADLVVVAPATADLMAKMAGGHADDLASTLLMATDKRVLIAPAMNVRMWEHPATRRNAERLAGDGILTVGPNEGNMACGEYGPGRMAEPMEILGAIE
type: DOMAIN
name: Flavoprotein
description: Flavoprotein

phrase: SDRRIVVTSGPTHEPIDPVRYIANRSSGAQGAAIARALADLGAEVVFVTGPAEVSPPAGVEVVRVDTAEQMRNAVHEALPADAGIFCAAVADWRVTNASGQKVKKSPDGLPRLEFAENPDILAEISGLGSDRPSLVVGFAAETENVLENATAKRRRKGCDWLVANDVSAGTGIMGGTENKVTL
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal
Protein sequence:
MIGRLTGTLAEKSPPQLLVDVGGVGYEVDVPMSTFYNLPVLGERVTLLTHFVVREDAQLLYGFLTATERATFRQLLKISGVGARTALSILSGLSVADLAQAVSAQEAGRLVKVPGIGKKTAERLLLELKGKLGPDLALPGAVIRNEAQSDIVQALIALGYNEREAAAAIKPLPADVGVSDGIKLALRALGK

Annotated regions:
phrase: MIGRLTGTLAEKSPPQLLVDVGGVGYEVDVPMSTFYNLPVLGERVTLLTHFVVREDAQLLY
type: DOMAIN
name: DNA_helicase_Holl-junc_RuvA_I
description: DNA helicase, Holliday junction RuvA type, domain I, bacterial

phrase: RQLLKISGVGARTALSILS
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: GRLVKVPGIGKKTAERLLL
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: AQSDIVQALIALGYNEREAAAAIKPLPADVGVSDGIKLALRA
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal

phrase: AQSDIVQALIALGYNEREAAAAIKPLPADVGVSDGIKLAL
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal
Protein sequence:
MTAAEIKDKVFDIIVSRMGVNKDQIKMESKFSDDLGADSLDTVELIMELENAFDVQIPDEDAEKIATVQQAVDYIVSKQ

Annotated regions:
phrase: KVFDIIVSRMGVNKDQIKMESKFSDDLGADSLDTVELIMELENAFDVQIPDEDAEKIATVQQAVDY
type: DOMAIN
name: PP-bd_ACP
description: Phosphopantetheine binding ACP domain

phrase: DLGADSLDTVELIME
type: PTM
name: Ppantetheine_attach_site
description: Phosphopantetheine attachment site

phrase: AEIKDKVFDIIVSRMGVNKDQIKMESKFSDDLGADSLDTVELIMELENAFDVQIPDEDAEKIATVQQAVDYIVSK
type: DOMAIN
name: PP-bd_ACP
description: Phosphopantetheine binding ACP domain
Protein sequence:
MHISVILFCALWSAVSAENSDDYELMYVNLDNEIDNGLHPTEDPTPCDCSRENSEWDKLFTMLENSQMREGMLLQATDVMLRGELQKLQAELGRLEGSLQKLCGPEAPSETRLARALDDLLQASRDAGRRLARLEDAGALRPQEEAGRALGAVLEELRRTRADLRAVQGWAASRWLPAGCETAILFPMRSKKIFASVHPVTPMKLETFSACIWVKATEVLNKTVLFSYGTKRNPYEIQLYLSYRSIMLVVGGEENRLVADAVISLGTWTHLCSTWDSKKGHMALWVNGDSVATAVDMATGHVVPEGGILQIGQEKNGCCVGGGFDETLAFSGRLTGFNIWEGVLSNEEIREAGGAESCHIRGNVVGWGVTEIQPHGGAQYVY

Annotated regions:
phrase: HLCSTWD
type: CONSERVED_SITE
name: Pentaxin_CS
description: Pentaxin, conserved site
Protein sequence:
MKNKNQMKVEKILRLPSWIKFPISKASEFEKMQRLIRKSNIHTICEEGRCPNRAECYASGTATFLLGGSICSRACAFCQVNKGKPSEINKYESIQVAEAVKILNLKYVVLTSVARDDLPDHGANLFVSTINQIRKIDPKIQIEVLTPDLWGGGKSFEDKDKLQKDRLKKILEQRPICFNHNLETVERLQKEVRRGANYKNSIGLLEKAKSIAPNIQTKSGIMLGLGETLKEIETTILDLKKVDCNQITIGQYLRPSLKHLSVKKYWAPKEFEYLKSFCSKLGFKKVSCGPLVRSSYHAG

Annotated regions:
phrase: NKNQMKVEKILRLPSWIKFPISKASEFEKMQRLIRKSNIHTICEEGRCPNRAECYASGTATFLLGGSICSRACAFCQVNKGKPSEINKYESIQVAEAVKILNLKYVVLTSVARDDLPDHGANLFVSTINQIRKIDPKIQIEVLTPDLWGGGKSFEDKDKLQKDRLKKILEQRPICFNHNLETVERLQKEVRRGANYKNSIGLLEKAKSIAPNIQTKSGIMLGLGETLKEIETTILDLKKVDCNQITIGQYLRPSLKHLSVKKYWAPKEFEYLKSFCSKLGFKKVSCGPLVRSSYHA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: YASGTATFLLGGSICSRACAFCQVNKGKPSEINKYESIQVAEAVKILNLKYVVLTSVARDDLPDHGANLFVSTINQIRKIDPKIQIEVLTPDLWGGGKSFEDKDKLQKDRLKKILEQRPICFNHNLETVERLQKEVRRGANYKNSIGLLEKAKSIAPNIQTKSGIMLGLGETLKEIETTILDLKKVDCNQITIGQYLRPSLKHLSVKKYWAPKEFEYLKSFCSKLGF
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: KNQMKVEKILRLPSWIKFPISKASEFEKMQRLIRKSNIHTICEEGR
type: DOMAIN
name: LIAS_N
description: Lipoyl synthase, N-terminal

phrase: SICSRACAFCQVNKGKPSEINKYESIQVAEAVKILNLKYVVLTSVARDDLPDHGANLFVSTINQIRKIDPKIQIEVLTPDLWGGGKSFEDKDKLQKDRLKKILEQRPICFNHNLETVERLQKEVRRGANYKNSIGLLEKAKSIAPNIQTKSGIMLGLGETLKEIETTIL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TATFLLGGSICSRACAFCQVNKGKPSEINKYESIQVAEAVKILNLKYVVLTSVARDDLPDHGANLFVSTINQIRKIDPKIQIEVLTPDLWGGGKSFEDKDKLQKDRLKKILEQRPICFNHNLETVERLQKEVRRGANYKNSIGLLEKAKSIAPNIQTKSGIMLGLGETLKEIETTILDLKKVDCNQITIGQYLRPSLKHLSVKKYWAPKEFEYLKSFC
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain
Protein sequence:
MSEYLKALFELKELRQKFIFTLLMFVIYRLGSHIPIPGINPEALRDFLKAFEGSVFALYDIFSGGNLGRLTVFALGVMPYISASIMMQLLTVAIPSLQRLAKEEGDYGRYKINEYTKYLTLFVATVQSLGIAFWIRGQVSPKGIPVVENPGISFILITVLTLVAGTMFLVWIADRITEKGIGNGASLIIFAGIVANFPNAVIQFYEKVKTGDIGPLTLLLIIALIIAIIVGIVYVQEAERRIPIQYPGRQVGRQLYAGRKTYLPIKINPAGVIPIIFAQALLLIPSTLLNFVQNPFIKVIADMFQPGAIFYNFLYVTFIVFFTYFYTAVLINPVELAENLHKAGAFIPGVRPGQDTVKYLERIINRLIFFGALFLSVIALIPILISVWFNIPFYFGGTTALIVVGVALDTFRQIETYLIQKKYKSYVRR

Annotated regions:
phrase: WIADRITEKGIGNGASL
type: CONSERVED_SITE
name: SecY_CS
description: SecY conserved site

phrase: TVFALGVMPYISASIMMQL
type: CONSERVED_SITE
name: SecY_CS
description: SecY conserved site
Protein sequence:
MTAIEPQNLEKHTPMMRQYLTLKAQHPDMLLFYRMGDFYELFYEDAKLASELLGISLTARGKSGGDPIPMAGLPYHAVEGYLAKLVQLRVSVAICEQIGDPATSKGPVERKVVRIVTPGTLTDEALLQERQDNLLAALYQGKSGYGYATLDIASGRFVITELANTEALEAELQRTNPAELLYSEDFSQMSLIAGMNGTRRRPEWEFDFDTCQRLLLNQFGTKDLNGFGIEGARLSLQAAGCLMQYVKDTQRTALPHINSIVRFNQTDSIVLDAATRRNLELTVNLQGGHTNTLASVLDSTVTAMGSRMLQRWLHQPLRDHQVIKARQSSIAELIATENYQLLAEDLKALGDVERITARIALRNARPRDFARLRQALGLLPQLQQTLKASSEPHLQYLSQVIGEFPEELALLSRAVVDNPPMLIRDGGVIRDGYDAELDEWRVLSAGATDYLTQLEAREKEQTGISTLKVGYNRVHGYYIEVSRRESDLVPLSYQRRQTLKNTERYIIAELKEHEEKVLSSQGKALALEKQLWEELFDLILPKLHELQEFATAAAELDVLCNFAECAETLNYACPELSDASGIHVEAGRHPVVEQVSQSPFIANPVTLNSQRKMLIVTGPNMGGKSTYMRQIALITLMAHIGCYVPAEHAVIGPVDRIFTRIGASDDLASGRSTFMVEMTETANILHNATPNSLVLMDEIGRGTSTYDGLSLAWSAAEYLANNLNAMTLFATHYFELTQLPEQIKNVENVHLDAVEHGDSIVFMHAVQEGPASRSYGLQVAALAGVPNSVICAAKQKLHHLESRDHALEQSKNGEMAVQQTISFPTQPTSPVIEALEKLNPDELTPRQALDYLYNLKKMAR

Annotated regions:
phrase: TPMMRQYLTLKAQHPDMLLFYRMGDFYELFYEDAKLASELLGISLTARGKSGGDPIPMAGLPYHAVEGYLAKLVQLRVSVAICEQIGDPATSKGPVERKVVRIVTPGTLTD
type: DOMAIN
name: DNA_mismatch_repair_MutS-lik_N
description: DNA mismatch repair protein MutS-like, N-terminal

phrase: SLVLMDEIGRGTSTYD
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: GYDAELDEWRVLSAGATDYLTQLEAREKEQTGISTLKVGYNRVHGYYIEVSRRESDLVPLSYQRRQTLKNTERYIIAELKEHEEKVLSS
type: DOMAIN
name: DNA_mismatch_repair_MutS_clamp
description: DNA mismatch repair protein MutS, clamp

phrase: LIVTGPNMGGKSTYMRQIALITLMAHIGCYVPAEHAVIGPVDRIFTRIGASDDLASGRSTFMVEMTETANILHNATPNSLVLMDEIGRGTSTYDGLSLAWSAAEYLANNLNAMTLFATHYFELTQLPEQIKNVENVHLDAVEHGDSIVFMHAVQEGPASRSYGLQVAALAGVPNSVICAAKQKLHHL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: NLLAALYQGKSGYGYATLDIASGRFVITELANTEALEAELQRTNPAELLYSEDFSQMSLIAGMNGTRRRPEWEFDFDTCQRLLLNQFGTKDLNGFGIEGARLSLQAAGCLMQYVKDTQRTALPH
type: DOMAIN
name: DNA_mmatch_repair_MutS_con_dom
description: DNA mismatch repair protein MutS, connector domain

phrase: RKMLIVTGPNMGGKSTYMRQIALITLMAHIGCYVPAEHAVIGPVDRIFTRIGASDDLASGRSTFMVEMTETANILHNATPNSLVLMDEIGRGTSTYDGLSLAWSAAEYLANNLNAMTLFATHYFELTQLPEQIKNVENVHLDAVEHGDSIVFMHAVQEGPASRSYGLQVAALAGVPNSVICAAKQKL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: ATRRNLELTVNLQGGHTNTLASVLDSTVTAMGSRMLQRWLHQPLRDHQVIKARQSSIAELIATENYQLLAEDLKALGDVERITARIALRNARPRDFARLRQALGLLPQLQQTLKASSEPHLQYLSQVIGEFPEELALLSRAVVDNPPMLIRDGGVIRDGYDAELDEWRVLSAGATDYLTQLEAREKEQTGISTLKVGYNRVHGYYIEVSRRESDLVPLSYQRRQTLKNTERYIIAELKEHEEKVLSSQGKALALEKQLWEELFDLILPKLHELQEFATAAAELDVLCNF
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: GHTNTLASVLDSTVTAMGSRMLQRWLHQPLRDHQVIKARQSSIAELIATENYQLLAEDLKALGDVERITARIALRNARPRDFARLRQALGLLPQLQQTLKASSEPHLQYLSQVIGEFPEELALLSRAVVDNPPMLIRDGGVIRDGYDAELDEWRVLSAGATDYLTQLEAREKEQTGISTLKVGYNRVHGYYIEVSRRESDLVPLSYQRRQTLKNTERYIIAELKEHEEKVLSSQGKALALEKQLWEELFDLILPKLHELQEFATAAAELDVLCNFAECAETLNYACPELSDASGIHVEAGRHPVVEQ
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core