nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MEAKRPEQTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVCTATEDYQDVVQVCNQLGIAYYAVNFEKEYWDKVFTYFLEEYKAGRTPNPDVMCNKEIKFKAFLNHALTLGADYVATGHYAQVKNVDGQYQLIRGKDPNKDQTYFLNALSQQQLSRVMFPLGHLEKKEVRAIAERAGLATAKKKDSTGICFIGKRDFKEFLSSYLPAQPGEMQTLDGEVKGTHDGLMYYTLGQRQGLGIGGSGEPWFVIGKNLEKNILYVGQGFHHPGLYSEGLRAIKVNWILRRESDEPFECTAKFRYRQPDQKVTVYPQSDGAVEVLFAEPQRAITPGQAVVFYDGDVCLGGGTIDHVLKKKEDRESA

Annotated regions:
phrase: EGLRAIKVNWILRRESDEPFECTAKFRYRQPDQKVTVYPQSDGAVEVLFAEPQRAITPGQAVVFYDGDVCLGGGT
type: DOMAIN
name: MnmA-like_C
description: tRNA-specific 2-thiouridylase MnmA-like, C-terminal domain

phrase: KEFLSSYLPAQPGEMQTLDGEVKGTHDGLMYYTLGQRQGLGIGGSGEPWFVIGKNLEKNILYVG
type: DOMAIN
name: MnmA-like_central
description: tRNA-specific 2-thiouridylase MnmA-like, central domain
Protein sequence:
MNDLTHIDSGGTARMVDVGGKAETHRVAIARGTIRMRGQTLDAIRSGNAPKGDVLGPARIAGIMAAKKTGDLIPLCHPLALDAVNVDFAFVADGIECTATASLTGRTGVEMEALTAVSVALLTIYDMAKALDKGMVIEAIRLVEKRGGKSGTWKAAE

Annotated regions:
phrase: MVDVGGKAETHRVAIARGTIRMRGQTLDAIRSGNAPKGDVLGPARIAGIMAAKKTGDLIPLCHPLALDAVNVDFAFVADGIECTATASLTGRTGVEMEALTAVSVALLTIYDMAKALDKGMVIEAIRLVEKRG
type: DOMAIN
name: Mopterin_CF_biosynth-C_dom
description: Molybdopterin cofactor biosynthesis C (MoaC) domain
Protein sequence:
MLIIIRPSGEIALKSPRSRRNFEHTLANNIRSVIKEGKIWRSQGVLFLEVNDDNKNIEELSKVFGIASFSPVMSIKSYNNNLEDIINKAKEVFAEIVKGKIFSVRAKRIGSHNFTSLDVQRKVGEALYPFSRGVNLENPEVEVFIEIRNDVAYFYHKIIKGPKGLPVGVAGKTVVLFSGGIDSPVATWMMMKRGSIPVILNFNLGGSIHRKFVLEELSVLRKWSGGHKLKLFIVNGTDVLIKLSQIEKRNRVVMLKRVMYKVAERLCDKANAKSITTGESLSQVSSQTMTNLYVTEYGIKYPIFRPLIGFDKEEIVELARKIGTYQYSIKLPEYCAISTKARTSVELDEVLKDEENLNIDYEKVLENSEVIEI

Annotated regions:
phrase: GVAGKTVVLFSGGIDSPVATWMMMKRGSIPVILNFNLGGSIHRKFVLEELSVLRKWSGGHKLKLFIVNGTDVLIKLSQIEKRNRVVMLKRVMYKVAERLCDKANAKSITTGESLSQVSSQTMTNLYVTEYGIKYPIFRPLIGFDKEEIVELARKIGTYQYSIKLPEYCAISTKARTSVELDEVLKDEENL
type: DOMAIN
name: ThiI_AANH
description: Thil, AANH domain

phrase: LIIIRPSGEIALKSPRSRRNFEHTLANNIRSVIKEGKIWRSQGVLFLEVNDDNKNIEELSKVFGIASFSPVMSIKSYNNNLEDIINKAKEVFAEIVKGKIFSVRAKRIGSHNFTSLDVQRKVGEALYPFSRGVNLENPEVEVFIEIRNDVAYFYHKIIKG
type: DOMAIN
name: THUMP_ThiI
description: ThiI, THUMP domain

phrase: NKNIEELSKVFGIASFSPVMSIKSYNNNLEDIINKAKEVFAEIVKGKIFSVRAKRIGSHNFTSLDVQRKVGEALYPFSRGVNLENPEVEVFIEIRNDVAYFYHK
type: DOMAIN
name: THUMP_dom
description: THUMP domain

phrase: SFSPVMSIKSYNNNLEDIINKAKEVFAEIVKGKIFSVRAKRIGSHNFTSLDVQRKVGEALYPFSRGVNLENPEVEVFIEIRNDVAYFYHK
type: DOMAIN
name: THUMP_dom
description: THUMP domain

phrase: NNLEDIINKAKEVFAEIVKGKIFSVRAKRIGSHNFTSLDVQRKVGEALYPFSRGVNLENPEVEVFIEIRNDVAYF
type: DOMAIN
name: THUMP_dom
description: THUMP domain

phrase: SGEIALKSPRSRRNFEHTLANNIRSVIKEGKIWRSQGVLFLEVNDDNKNIEELSKVFGIASFSPVMSIKSYNNNLEDIINKAKEVFAEIVKGKIFSVRAKRIGSHNFTSLDVQRKVGEALYPFSRGVNLENPEVEVFIEIRNDVAYFYHKIIKGPKGLPVGVAGKTVVLFSGGIDSPVATWMMMKRGSIPVILNFNLGGSIHRKFVLEELSVLRKWSGGHKLKLFIVNGTDVLIKLSQIEKRNRVVMLKRVMYKVAERLCDKANAKSITTGESLSQVSSQTMTNLYVTEYGIKYPIFRPLIGFDKEEIVELARKIGTYQYSIKLPEYCAISTKARTSVELDEVLKDEENLNIDYEK
type: DOMAIN
name: ThiI_N
description: ThiI, N-terminal

phrase: IIIRPSGEIALKSPRSRRNFEHTLANNIRSVIKEGKIWRSQGVLFLEVNDDNKNIEELSKVFGIASF
type: DOMAIN
name: ThiI_fer
description: ThiI, ferredoxin-like domain

phrase: VGVAGKTVVLFSGGIDSPVATWMMMKRGSIPVILNFNLGGSIHRKFVLEELSVLRKWSGGHKLKLFIVNGTDVLIKLSQIEKRNRVVMLKRVMYKVAERLCDKANAKSITTGESLSQVSSQTMTNLYVTEYGIKYPIFRPLIGFDKEEIVELARKIGTYQYSIKLPEY
type: DOMAIN
name: ThiI_AANH
description: Thil, AANH domain
Protein sequence:
MYTKIIGTGSYLPEEIRTNADLEKMVETTDEWIVTRTGIRERRIAAPDENVATMGYRAAQKALEMANVDASEVGLLIVATTSSSHAFPSSACQVQQLLGIKDTIAFDLAAACAGFTYALSVADQYVKSGAVKYALVIGSDTLSRTLDPEDRGTLILFGDGAGAVLLTTSEQPGILSTHLHADGRYGELLTLPHQDRNHTDKPAYLTMAGNEVFKVAVTELAHIVEETLQAAQLDKSELDWLVPHQANLRIISATAKKLGMGMDKVVVTLDRHGNTSAASVPSALDEAVRDGRIKPGQLVLLEAFGGGFTWGSALVRF

Annotated regions:
phrase: FDLAAACAGFTYALSVADQYVKSGAVKYALVIGSDTLSRTLDPEDRGTLILFGDGAGAVLLTTSEQPGILSTHLHAD
type: DOMAIN
name: ACP_syn_III_N
description: Beta-ketoacyl-[acyl-carrier-protein] synthase III, N-terminal

phrase: LQAAQLDKSELDWLVPHQANLRIISATAKKLGMGMDKVVVTLDRHGNTSAASVPSALDEAVRDGRIKPGQLVLLEAFGGGFTWGSALV
type: DOMAIN
name: ACP_syn_III_C
description: Beta-ketoacyl-[acyl-carrier-protein] synthase III, C-terminal
Protein sequence:
MKREKIALAYSGGLDTSVMIKWLKDKYDADIIAVTGNLGQEKEIENLEQKAFDTGASGFSFLDLRKEFVENYIWPALKAGALYEEVYPLATALGRPLLAKALVDVALSEDCTMIAHGCTGKGNDQVRFEVTFASLAPHLKVLAPLREWEFNSREAEMAYAEKHGIPVSATKKSPYSIDENIWGISIECGVLEDPMVAPPEDAYQITTSPEKAPDNAAVIDIEFEQGVPVALDGRKMEGLDLIVELNKHGAAHGVGRLDMIENRVVGIKSREIYEAPAATILHFAHRELERLTLEKTVFQYKNTISQDYANLIYNGTWFSPMREALDGFVDATQKHVTGLVRVKLFKGSVTLLGRTSPWSLYNEELATYTEADTFNHKAAEGFIHLYGLGLKTYSEVQANNRK

Annotated regions:
phrase: YSIDENIWGISIECGVLEDPMVAPPEDAYQITTSPEKAPDNAAVIDIEFEQGVPVALDGRKMEGLDLIVELNKHGAAHGVGRLDMIENRVVGIKSREIYEAPAATILHFAHRELERLTLEKTVFQYKNTISQDYANLIYNGTWFSPMREALDGFVDATQKHVTGLVRVKLFKGSVTLLGRTSPWSLYNEELATYTEADTFNHKAAEGFIHLYGLGLKT
type: DOMAIN
name: Arginosuc_syn_C
description: Arginosuccinate synthase C-terminal domain

phrase: GCTGKGNDQVR
type: CONSERVED_SITE
name: Arginosuc_synth_CS
description: Argininosuccinate synthase, conserved site

phrase: KIALAYSGGLDTSVMIKWLKDKYDADIIAVTGNLGQEKEIENLEQKAFDTGASGFSFLDLRKEFVENYIWPALKAGALYEEVYPLATALGRPLLAKALVDVALSEDCTMIAHGCTGKGNDQVRFEVTFASLAPHLKVLAPLREWEFNSREAEMAYAEKHGI
type: DOMAIN
name: Arginosuc_syn_N
description: Arginosuccinate synthase-like, N-terminal domain

phrase: AYSGGLDT
type: CONSERVED_SITE
name: Arginosuc_synth_CS
description: Argininosuccinate synthase, conserved site
Protein sequence:
MRVKGIRKNYQHLWRWGTMLLGMLMICSAAGNLWVTVYYGVPVWKEAYTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEIGLENVTEKFNMWKNNMVEQMHDDIISLWDQSLKPCVKLTPLCVTLNCTDYFGNTTNTNSTPNTNSTAEIKNCTFNITTNIRDKVQKEYALLYKLDIVPIDSSNTSYRLRSCNTSVITQACPKVTFEPIPIHYCAPAGFAILKCRDKKFNGKGDCKNVSTVQCTHGIRPVVSTQLLLNGSLAEEGVVIRSDNFSNNAKTIIVQLKDPVEINCIRPNNNTRKSIHIGPGRAFYTTGQIIGDIRQAHCNISRAKWNNTLRQIVEKLGEQFGNRTIIFNQSSGGDPEIVMHSFNCGGEFFYCNSTQLFNSTWVFNNTWNRTEGLNNTAENITLPCRIKQIVNMWQEVGKAMYAPPIRGQIRCSSNITGLLLTRDGGNNTRNSETFRPGGGDMRDNWRSELYKYKVVQIEPLGVAPTKARRRVVQREKRAITLGAVFLGFLGAAGSTMGAASVTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVEKFLRDQQLLGIWGCSGRLICTTAVPWNASWSNKSLEEIWDNMTWREWEKEISNYTELIYSLIEKSQNQQEKNEQDLLELDKWADLWTWFDITHWLWYIKIFIMVVGGLIGLRIVFSVLSIVNRVRQGYSPLSFQTRPPAPRGPDRPEGIEEEGGERDRDRSGQLVDGFLAIIWVDLRSLCLFSYHRLR

Annotated regions:
phrase: LWVTVYYGVPVWKEAYTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEIGLENVTEKFNMWKNNMVEQMHDDIISLWDQSLKPCVKLTPLCVTLNCTDYFGNTTNTNSTP
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: NSTAEIKNCTFNITTNIRDKVQKEYALLYKLDIVPIDSSNTSYRLRSCNTSVITQACPKVTFEPIPIHYCAPAGFAILKCRDKKFNGKGDCKNVSTVQCTHGIRPVVSTQLLLNGSLAEEGVVIRSDNFSNNAKTIIVQLKDPVEINCIRPNNNTRKSIHIGPGRAFYTTGQIIGDIRQAHCNISRAKWNNTLRQIVEKLGEQFGNRTIIFNQSSGGDPEIVMHSFNCGGEFFYCNSTQLFNSTWVFNNTWNRTEGLNNTAENITLPCRIKQIVNMWQEVGKAMYAPPIRGQIRCSSNITGLLLTRDGGNNTRNSETFRPGGGDMRDNWRSELYKYKVVQIEPLGVAPTKARRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: VQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVEKFLRDQQLLGIWGCSGRLICTTAVPWNASWSNKSLEEIWDNMTWREWEKEISNYTELIYSLIEKSQNQQEKNEQDLLELD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASVTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVEKFLRDQQLLGIWGCSGRLICTTAVPWNASWSNKSLEEIWDNMTWREWEKEISNYTELIYSLIEKSQNQQEKNEQDLLELDKWADLWTWFDITHWLWYIKIFIMVVGGLIGLRIVFSVLSIVNRVRQGYSPLSFQ
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MVKLPSLKFLRRSTDETPNVSETASHSTVLDVGAEKLGKTYARALLAATQADGSTDAVVSDLNAICDEALLHNPKLQLAFQSPQIDADEKCRVVDRLFGGNSHPTLIKLMKVMAKRGRLGYLVAVRDAAVDLFDEAAGRVVAEVRTAVPMTEQLRGEVTQQLSSRFGKTVRLRESVDTELIGGMVIRVGDTVFDSSVASRLDKLGKSAAAGFARQLIEQSDRFSSSS

Annotated regions:
phrase: VRLRESVDTELIGGMVIRV
type: CONSERVED_SITE
name: ATPase_OSCP/d_CS
description: ATPase, OSCP/delta subunit, conserved site
Protein sequence:
MTSTHVATLGVGAQAPPRHQKKSAGTAFVSSGSSRPSYRKNGQRTRSLREESNGGVSDSKKLNHSIRQGLAGIIDLPNDAASEVDISHGSEDPRGPTVPGSYQMNGIINETHNGRHASVSKVVEFCTALGGKTPIHSVLVANNGMAAAKFMRSVRTWANDTFGSEKAIQLIAMATPEDLRINAEHIRIADQFVEVPGGTNNNNYANVQLIVEIAERTGVSAVWPGWGHASENPELPDALTAKGIVFLGPPASSMHALGDKVGSALIAQAAGVPTLAWSGSHVEVPLECCLDSIPDEMYRKACVTTTEEAVASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRTLFKQVQGEVPGSPIFIMRLAAQSRHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPVTVAPRETVKELEQAARRLAKAVGYVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEVNLPAAQVAVGMGIPLWQIPEIRRFYGMNHGGGYDLWRKTAALATPFNFDEVDSKWPKGHCVAVRITSEDPDDGFKPTGGKVKEISFKSKPNVWAYFSVKSGGGIHEFADSQFGHVFAYGTTRSAAITTMALALKEVQIRGEIHSNVDYTVDLLNASDFRENKIHTGWLDTRIAMRVQAERPPWYISVVGGALYKTVTANTATVSDYVGYLTKGQIPPKHISLVYTTVALNIDGKKYTIDTVRSGHGSYRLRMNGSTVDANVQILCDGGLLMQLDGNSHVIYAEEEASGTRLLIDGKTCML

Annotated regions:
phrase: VRITSEDPDDGFKPTGGKVKEISFKSKPNVWAYFSVKSGGGIHEFADSQFGHVFAYGTTRSAAITTMALALKEVQIRGEIHSNVDYTVDLLNASDFRENKIHTGWL
type: DOMAIN
name: Biotin_COase_C
description: Biotin carboxylase, C-terminal

phrase: FLELNPR
type: DOMAIN
name: CbamoylP_synth_lsu-like_ATP-bd
description: Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain

phrase: PIHSVLVANNGMAAAKFMRSVRTWANDTFGSEKAIQLIAMATPEDLRINAEHIRIADQFVEVPGGTNNNNYANVQLIVEIAERTGVSAVWPGWGHASENPELPDALTAKGIVFLGPPASSMHALGDKVGSALIAQAAGVPTLAWSGSHVEVPLECCLDSIPDEMYRKACVTTTEEAVASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRTLFKQVQGEVPGSPIFIMRLAAQSRHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPVTVAPRETVKELEQAARRLAKAVGYVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEVNLPAAQVAVGMGIPLWQIPEIRRFYGMNHGGGYDLWRKTAALATPFNFDEVDSKWPKGHCVAVRITSEDPDDGFKPTGGKVKEISFKSKPNVWAYFSVKSGGGIHEFADSQFGHVFAYGTTRSAAITTMALALKEVQIRGEIHSNVDYTVDLLNASDFRENKIHTGWLDTRI
type: DOMAIN
name: Biotin_carboxylation_dom
description: Biotin carboxylation domain

phrase: CVTTTEEAVASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRTLFKQVQGEVPGSPIFIMRLAAQSRHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPVTVAPRETVKELEQAARRLAKAVGYVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEVNLPAAQVAVGMGIPL
type: DOMAIN
name: CbamoylP_synth_lsu-like_ATP-bd
description: Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain

phrase: AVRITSEDPDDGFKPTGGKVKEISFKSKPNVWAYFSVKSGGGIHEFADSQFGHVFAYGTTRSAAITTMALALKEVQIRGEIHSNVDYTVDLLNASDFRENKIHTGWL
type: DOMAIN
name: Biotin_COase_C
description: Biotin carboxylase, C-terminal

phrase: ISVVGGALYKTVTANTATVSDYVGYLTKGQIPPKHISLVYTTVALNIDGKKYTIDTVRSGHGSYRLRMNGSTVDANVQILCDGGLLMQLDGNSHVIYAEEEASGTRLLIDGKTCM
type: DOMAIN
name: ACCA_BT
description: Acetyl-CoA carboxylase, BT domain

phrase: ECCLDSIPDEMYRKACVTTTEEAVASCQVVGYPAMIKASWGGGGKGIRKVHNDDEVRTLFKQVQGEVPGSPIFIMRLAAQSRHLEVQLLCDQYGNVAALHSRDCSVQRRHQKIIEEGPVTVAPRETVKELEQAARRLAKAVGYVGAATVEYLYSMETGEYYFLELNPRLQVEHPVTEWIAEVNLPAAQVAVGMG
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold

phrase: IHSVLVANNGMAAAKFMRSVRTWANDTFGSEKAIQLIAMATPEDLRINAEHIRIADQFVEVPGGTNNNNYANVQLIVEIAERTGVSAVWPGWGHASENPELPDALTAKGIVFLGPPASS
type: DOMAIN
name: BC-like_N
description: Biotin carboxylase-like, N-terminal domain
Protein sequence:
MQKVFNMHDLVKFSPETLKYNEAGLVPCIAQDVESGEILMMAWMNAESVAKTLETGRVTYWSRSRQSFWIKGESSGHVQELVELRVDCDRDALLAMVRQTGPACHTNRRSCFYTAIRDGEEHEIMTPIS

Annotated regions:
phrase: MMAWMNAESVAKTLETGRVTYWSRSRQSFWIKGESSGHVQELVELRVDCDRDALLAMVRQTGPACHTNRRSCF
type: DOMAIN
name: PRib_AMP_CycHydrolase_dom
description: Phosphoribosyl-AMP cyclohydrolase domain
Protein sequence:
MRVTGMKKSCQQWWIWGILGFWMLMIYNVMGNMWVTVYYGVPVWREAKTTLFCASNAKAYDTEVHNVWATHACVPTDPNPQELELKNVTENFNMWENDMVDQMHQDIISLWDQSLKPCVKLTPLCVTLNCTHAKANHNFTIDDSSKTEVKNCSFNITTELRDKVKKVHALFYKPDLVPLDNPNNSSKNFSNYILINCNTSAITQACPKVTFEPIPIHFCAPAGFAILKCNNETFNGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAKNQTIIRSQNLTNNAKTIIVQFKTPVQINCTRPGNNTRQGIGIGPGQTFFATDAIIGDIRQAHCNISKTAWNKTLQDVGKELAKHFPNKTIEFAESSGGDLEITMHSFNCRGEFFYCNTSQLFHSTYNSTYNSTDKGNSTDDTITLPCRIKQIINMWQEVGKAIYAPPIPGKITCNSSITGLLLTRDGGQNNTNETFRPGGGDMRDNWRSELYKYKVVEIRPLGVAPTDAKRRVVEREKRAVGIGAVLLGFLGAAGSTMGAASVALTVQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQARVLAIERYLKDQQLLGLWGCSGKLICTTAVPWNISWSNKSKDEIWENMTWMEWEREIDNYTETIYRLLEDSQTQQETNEKDLLALDKWQDLWNWFQITKWLWYIKIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQTLTPTAPRELDRLGGIEEEGGEQDRGRSIRLVSGFLALAWNDLRSLCLFSYHRL

Annotated regions:
phrase: TIDDSSKTEVKNCSFNITTELRDKVKKVHALFYKPDLVPLDNPNNSSKNFSNYILINCNTSAITQACPKVTFEPIPIHFCAPAGFAILKCNNETFNGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAKNQTIIRSQNLTNNAKTIIVQFKTPVQINCTRPGNNTRQGIGIGPGQTFFATDAIIGDIRQAHCNISKTAWNKTLQDVGKELAKHFPNKTIEFAESSGGDLEITMHSFNCRGEFFYCNTSQLFHSTYNSTYNSTDKGNSTDDTITLPCRIKQIINMWQEVGKAIYAPPIPGKITCNSSITGLLLTRDGGQNNTNETFRPGGGDMRDNWRSELYKYKVVEIRPLGVAPTDAKRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: MWVTVYYGVPVWREAKTTLFCASNAKAYDTEVHNVWATHACVPTDPNPQELELKNVTENFNMWENDMVDQMHQDIISLWDQSLKPCVKLTPLCVTLNCTHAKANHN
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: MGAASVALTVQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQARVLAIERYLKDQQLLGLWGCSGKLICTTAVPWNISWSNKSKDEIWENMTWMEWEREIDNYTETIYRLLEDSQTQQETNEKDLLALDKWQDLWNWFQITKWLWYIKIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQTL
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: VQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQARVLAIERYLKDQQLLGLWGCSGKLICTTAVPWNISWSNKSKDEIWENMTWMEWEREIDNYTETIYRLLEDSQTQQETNEKDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MMVDNEEINSLSIENILERINKSSNINEAKSLCLFASSLFDNNQYLLIQRYLISIKERDFDISIQLFWRLFNNNSFKEYIVLVVLKFLEKEIEDLEYYDFIKKNYRDQFQKIFIDSDDNSTNNSSSSSNENKKNKRSYLKLNTILNKLTKSLNHLSFYISEIDNLNKFFNPITFLLNNNNNNNNNNNNNNNNNNNKNNSNNNNKNNNNNNDDSNNNNNNNFLKILELIQKSCQYLNENENYEYSILLYLLIKGKFENKIRTFIKSSKKEDQDIKSKIKRFWFNGIQSLNQYKNKYSSKIEIEPPLPMKSYFDEDDYDQKQQQQQQQQQQQQEQKGSKEDEEDIEKQKKSLTSEIELFLLPINRFCLPIIFHIENEEFEQLDIKGNSGSGSDSSSSISKLEIVDQCWKYYICKGDDITDESILEIQKFLQQFADSGKHLKRHQNNSILNFTINLLSNPEKARNDYFDRNSEGNGGDENDENSQESNDSYEFEIHLGIYLLSSLLYISSWRYFKFLVTGSSNIEKQNIQTIGTLKKNQILLFDANFNSNSNSSSGSNGIINNNSNSNQQSYHNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNQGQQPNLSMITHQVLYYSNVDDESSFDDEFPKIVFTKQQTEAIKHLTLCMECFNDLNQEPWINDFKRILSTTWNNSKFYWLYNSLADSHYYYKLDGANTLIPIGDSKKRLFNPNDELWFNRLLLNIGMTNHSEIEDSIICLLEILISISIPPPPSSSSSSFSSSNSSLNNDLFNQQLVPSKHTFKTIKPYLTVFSEEEILFWCIDTLATCYERLGMVGEITVLYQAYWNYYKSRFYQIINEIKGTPNQNPNLIPLSNLVKKDLQIGYFFPRFFDYIINIEMLEEFCFILNKGFKLDILQRNQTVSSNREMIDIIKRHITITTSNNNLTIPILLKQFFNEELDHFLIKKENREKQYSSSNTANNSGVNNSPIHNQNTDVEMNE

Annotated regions:
Protein sequence:
MSGQFLNRDQAVQGLPFILFLSLLGIFYIANGYQAEKLIRQIYKTNNELKELRSEYITTKSDLMIIAMNEVKKDIAWRVYLTYFAVCLFGLAIIVKAATIQLIEGPELREKVQSYTLKEKNIEAVRGNIYATDGSLLATSVPIYEVRFDPNADAITDEIFYDEVDSLAYKLSELFQDKPMVAYRRSLVNARKEGQRYHLIKRKVKYTELKSLKTFPIFRRGKYKGGLIYIQQNKRQRPFKVLAARTIGYEREGISPVGLEGAYSDVLKGVDGKRMMQKISGGVWMPVGDDNEIEPEDGRDIYTTIDVNLQDVAESALLKQLQTHKADHGCVVLMEVKTGAIKAIANLKRNDDGSYYEGYNYAIGESTEPGSTFKLAALITALEDGYVDMEDMVDCGDGSKQYYDRTMYDSNHDDGGSGKITVQRIFEVSSNIGMAEIIQRSYAQEPQKFIDGLDEMGLRKPLGIEIAGEGRPYIKNTSDDSWSGISLAWMAHGYEVKQTPLQILTFYNAIANDGRMVKPKFVERITKGRKTVEEIDTEVLVDEVCSQKTIDKVKLALEGVVENGTASNLRNADYKIAGKTGTAQIANRNYGYEYESKVSHQASFVGYFPADDPQYSCIVVVNAPSQNVYYGNLVAGPIFKEVADKVYANSLEMHDPLQKQENYLAASPIPYSKHGNKYSIEKIFSELNIPVKSKAADADWIVTQTGDSAVEDSSEALGQMAHNFYGSPSDRIKLIGVTGTNGKTTTVSLLYDLFTSLGKRSGLISTVL

Annotated regions:
phrase: IEAVRGNIYATDGSLLATSVPIYEVRFDPNADAITDEIFYDEVDSLAYKLSELFQDKPMVAYRRSLVNARKEGQRYHLIKRKVKYTELKSLKTFPIFRRGKYKGGLIYIQQNKRQRPFKVLAARTIGYEREGISPVGLEGAYSDVLKGVDGKRMMQ
type: DOMAIN
name: PBP_dimer
description: Penicillin-binding protein, dimerisation domain

phrase: GCVVLMEVKTGAIKAIANLKRNDDGSYYEGYNYAIGESTEPGSTFKLAALITALEDGYVDMEDMVDCGDGSKQYYDRTMYDSNHDDGGSGKITVQRIFEVSSNIGMAEIIQRSYAQEPQKFIDGLDEMGLRKPLGIEIAGEGRPYIKNTSDDSWSGISLAWMAHGYEVKQTPLQILTFYNAIANDGRMVKPKFVERITKGRKTVEEIDTEVLVDEVCSQKTIDKVKLALEGVVENGTASNLRNADYKIAGKTGTAQIANRNYGYEYESKVSHQASFVGYFPADDPQYSCIVVVNAPSQNVYYGNLVAGPIFKEV
type: DOMAIN
name: PCN-bd_Tpept
description: Penicillin-binding protein, transpeptidase
Protein sequence:
MSTEAGEGITFSVPPFTSSGFCTFPEGGSCRRGGVATVAEGEPSQLPPPPPGSFWNVESTAAPGTGCAAATPGSSATRCRGNSSSGGGRRTTVAYVINEASQGQLVVAESEALQSLREACEAVGATLETLHFGKLDFGETTVLDRFYNADIAVVEMSDAFRQPSLFYHLGVRESFSMANNIILYCDTNSDSLQSLKVLLLMCTGNYTFVPYMVTPHNKVYCCDSSFMKGLTELMQPNFELLLGPICLPLVDRFIQLLKVAQASSSQYFRESILNDIRKARNLYTGKELAAELARIRQRVDNIEVLTADIVINLLLSYRDIQDYDSIVKLVETLEKLPTFDLASHHHVKFHYAFALNRRNLPGDRAKALDIMIPMVQSEGQVASDMYCLVGRIYKDMFLDSNFTDTESRDHGASWFKKAFESEPTLQSGINYAVLLLAAGHQFESSFELRKVGNYSLLYLLASNFILWYLKSIVETILIYKHFVKLTTEQPVAKQELVDFWMDFLVEATKTDVTVVRFPVLILEPTKIYQPSYLSINNEVEQKTISIWHVLPDDKVNYAIIKIRALVMKDFTSFYISKFEERCCFLYVLHNSDDFQIYFCTELHCKKFFEMVNTITEEKGRGAEEGDCESDSLEVMTLVWVLPIAIFVSFRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC

Annotated regions:
phrase: IVHRDIKGDNVL
type: ACTIVE_SITE
name: Ser/Thr_kinase_AS
description: Serine/threonine-protein kinase, active site

phrase: VVRFPVLILEPTKIYQPSYLSINNEVEQKTISIWHVLPDDKVNYAIIKIRALVMKDFTSFYISKFEERCCFLYVLHNSDDFQIYFCTELHCKKFFEMVNT
type: DOMAIN
name: MAP3K_PH
description: MAP3K, PH domain

phrase: SLREACEAVGATLETLHFGKLDFGETTVLDRFYNA
type: DOMAIN
name: DRHyd-ASK
description: MAP3K, deoxyribohydrolase domain

phrase: LHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRL
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: LFYHLGVRESFSMANNIILYCDTNSDSLQSLKVLLLMCTGNYTFVPYMVTPHNKVYCCDSSFMKGLTELMQPNFELLLGPICLPLVDRFIQLLKVAQASSSQYFRESILNDIRKARNLYTGKELAAELARIRQRVDNIEVLTADIVINLLLSYRDIQDYDSIVKLVETLEKLPTFDLASHHHVKFHYAFALNRRNLPGDRAKALDIMIPMVQSEGQVASDMYCLVGRIYKDMFLDSNFTDTESRDHGASWFKKAFESEPTLQSGINYAVLLLAAGHQFESSFELRKVGNYSLLYL
type: DOMAIN
name: MAP3K_TRAF-bd
description: MAP3K, TRAFs-binding domain

phrase: LWYLKSIVETILIYKHFVKLTTEQPVAKQELVDFWMD
type: DOMAIN
name: MAP3K_TRAF-bd
description: MAP3K, TRAFs-binding domain

phrase: FEMVNTITEEKGRGAEEGDCESDSLEVMTLVWVLPIAIFVSFRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: NTITEEKGRGAEEGDCESDSLEVMTLVWVLPIAIFVSFRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain
Protein sequence:
MRPTTNPARPLNGLAALFGIEQTGWEAVSATGITHDSRAVRRGDVYAALPGTRAHGARFAAQAADAGAAAILTDHDGYDRAAATGLPVMVVPDVRARLGEAASWVYGEPGRDITLIGVTGTSGKTTTVFLLDAGLRAAGIETGLVGGVEIRVAGRRVPSALTTPESTDLHALLAMMRERDVGAASMEVSSHALVQGRVGGAVFEVAVFTNLSQDHLDYHPTMHDYFLAKARLFTPEYSRVGVINLDDHHGRELLDIATVPVTTFSASGDPAADWRAEDVRVGADGSVFRVVGPGGIEADAEVGLAGPFNVANALAAIVALVEAGIPLQAAVHGVASLPGVPGRLERVDEGQDFVTLVDYSHKPGAVEAVLNALRPVTEGELAIVLGCGGDRDRGKRPLMGEAAARLADSAYFTSDNPRSEDPLAILAAMVEGGLKVPQPERARVVVEPDRAAAIALAVGRARRGDVLVIAGKGHEQGQNVAGEVHPFDDREVAREALRRRVKGTRGDGAQA

Annotated regions:
phrase: TGITHDSRAVRRGDVYAALPGTRAHGARFAAQAADAGAAAILTDHDGYDRAAATGLPVMVVPDVRARLGEAA
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: VTGTSGKTTTVFLLDAGLRAAGIETGLVGGVEIRVAGRRVPSALTTPESTDLHALLAMMRERDVGAASMEVSSHALVQGRVGGAVFEVAVFTNLSQDHLDYHPTMHDYFLAKARLFTPEYSRVGVINLDDHHGRELLDIATVPVTTFSASGDPAADWRAEDVRVGADGSVFRVVGPGGIEADAEVGLAGPFNVANALAAIV
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRLERVDEGQDFVTLVDYSHKPGAVEAVLNALRPVTEGELAIVLGCGGDRDRGKRPLMGEAAARLADSAYFTSDNPRSEDPLAILAAMVEGGLKVPQPERARVVVEPDRAAAIALAVGRARRGDVLVIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MALLRGFLVCSLLLLSCICKEALGTRLLGGLENASPEEPGVARALQFAMNEYNRGSNDMYSSRVSEVVEAQKQIVSGIKYYFTVKIGRTVCRKGATDLENCAFHNAPKLAQTMTCTFEVYNIPWRNFISLEKSSCT

Annotated regions:
phrase: RLLGGLENASPEEPGVARALQFAMNEYNRGSNDMYSSRVSEVVEAQKQIVSGIKYYFTVKIGRTVCRKGATDLENCAFHNAPKLAQTMTCTFEVYNIPWRNFISLEKSSC
type: DOMAIN
name: Cystatin_dom
description: Cystatin domain

phrase: GGLENASPEEPGVARALQFAMNEYNRGSNDMYSSRVSEVVEAQKQIVSGIKYYFTVKIGRTVCRKGATDLENCAFHNAPKLAQTMTCTFEVYNIP
type: DOMAIN
name: Cystatin_dom
description: Cystatin domain

phrase: GGLENASPEEPGVARALQFAMNEYNRGSNDMYSSRVSEVVEAQKQIVSGIKYYFTVKIGRTVCRKGATDLENCAFHNAPKLAQTMTCTFEVYNIPWRNFISLEKSS
type: DOMAIN
name: Cystatin_dom
description: Cystatin domain

phrase: KQIVSGIKYYFTV
type: CONSERVED_SITE
name: Prot_inh_cystat_CS
description: Proteinase inhibitor I25, cystatin, conserved site
Protein sequence:
MKNIFKGPIIWIVLVLAILLIAVPNLAGPQSERVDTSVGLQLLSENKAEQARINDGAQSVELTLREDFIQDDVNKGRSITFFYSTDRGPDIVDAINTSDVDTFTDQPVENNWFMSFISLILPILIIGLIFWFLLSRMQGGGSKVMQFGKSKAKLISKDMPQVTFADVAGADEAVEELHEIKEFLQEPGKFQALGAKIPKGVLLYGPPGTGKTLLARAVAGEAGVPFYSISGSDFVEMFVGVGASRVRDLFEQAKNNAPAIIFVDEIDAVGRHRGAGVGGGNDEREQTLNQLLVEMDGFDVKTNVILIAATNRPDVLDPALLRPGRFDRQIAVEAPDLDGRHQILQVHAAGKPMAPDVDLRALAKRAPGFTGADLANVLNEAALLTARSNAQLIDDRALDEAIDRVMAGPQKRSRVMKEHERKITAYHEGGHALVAAALRYTAPVTKVTILPRGRALGYTMVVPEDDKYSVTRNELLDQLAYAMGGRVAEEIVFHDPSTGASNDIEKATSTARQMVTQYGMSERVGAVKLGQGGGEPFLGRDMSHERNYSDHVAFVVDEEVRRLIDNAHDEAYAVLTENRDVLDRLALALLERETLNQREIEEVFADIRKREYRDVWLSKESRPVHDIPPVLSPKERAEAAAKVGAEDEEEGHSSVIVDPDPGTPQLPGGNPPSDGPAAPGSNPGGITG

Annotated regions:
phrase: RVMKEHERKITAYHEGGHALVAAALRYTAPVTKVTILPRGRALGYTMVVPEDDKYSVTRNELLDQLAYAMGGRVAEEIVFHDPSTGASNDIEKATSTARQMVTQYGMSERVGAVKLGQGGGEPFLGRDMSHERNYSDHVAFVVDEEVRRLIDNAHDEAYAVLTENRDVLDRLALALLERETLNQREIEE
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: IPKGVLLYGPPGTGKTLLARAVAGEAGVPFYSISGSDFVEMFVGVGASRVRDLFEQAKNNAPAIIFVDEIDAVGRHRGAGVGGGNDEREQTLNQLLVEMDGFDVKTNVILIAATNRPDVLDPALLRPGRFDRQIAVEAP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VILIAATNRPDVLDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: VLLYGPPGTGKTLLARAVAGEAGVPFYSISGSDFVEMFVGVGASRVRDLFEQAKNNAPAIIFVDEIDAVGRHRGAGVGGGNDEREQTLNQLLVEMDGFDVKTNVILIAATNRPDVLDPALLRPGRFDRQIAV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: DVDLRALAKRAPGFTGADLANVLNEAALLTARSNAQLIDDRAL
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain
Protein sequence:
MIIFAIESSHDDTSFALLDDNKPIWMKTITQTEIHKQYGGTVPEIASRLHVKNIGILIEDIKSQININKIDLIAYTKEPGLVGSLHVGYVVAQSLALILNKKIVGLNHLEGHFYSAFIGKEVIYPALGLLVSGGHSQLVLYNSKDDFKIIGQTQDDAVGEVYDKVARKLNLGFPGGPLIDQIWKNNHKLYTAHLTIPKTEGFFDFSFSGIKTNVINLINNCASRNEQINVNQIATEFQNTIVEYLKEHMETAIKKFSPKCIVLAGGVSANFAIREMFYSLHKNVFLPDLEYTTDNAMMIARLAYEKFRYNN

Annotated regions:
phrase: MIIFAIESSHDDTSFALLDDNKPIWMKTITQTEIHKQYGGTVPEIASRLHVKNIGILIEDIKSQININKIDLIAYTKEPGLVGSLHVGYVVAQSLALILNKKIVGLNHLEGHFYSAFIGKEVIYPALGLLVSGGHSQLVLYNSKDDFKIIGQTQDDAVGEVYDKVARKLNLGFPGGPLIDQIWKNNHKLYTAHLTIPKTEGFFDFSFSGIKTNVINLINNCASRNEQINVNQIATEFQNTIVEYLKEHMETAIKKFSPKCIVLAGGVSANFAIREMFYSLHKNVFLPDLEYTTDNAMMIARLAYEKFR
type: DOMAIN
name: Gcp-like_dom
description: Gcp-like domain

phrase: KTITQTEIHKQYGGTVPEIASRLHVKNIGILIEDIKSQININKIDLIAYTKEPGLVGSLHVGYVVAQSLALILNKKIVGLNHLEGHFYSAFIGKEVIYPALGLLVSGGHSQLVLYNSKDDFKIIGQTQDDAVGEVYDKVARKLNLGFPGGPLIDQIWKNNHKLYTAHLTIPKTEGFFDFSFSGIKTNVINLINNCASRNEQINVNQIATEFQNTIVEYLKEHMETAIKKFSPKCIVLAGGVSANFAIREMFYSLHKNVFLPDLEYTTDNAMMI
type: DOMAIN
name: Gcp-like_dom
description: Gcp-like domain
Protein sequence:
MFISSMNPVKKNNSGGILSRIQFPEDIRMLDIGDLTLLASDIRSAIIETVSRTGGHLASSLGTVELTLAVHKVFDTPKDRVIWDVGHQAYAHKLITGRRDVFSTLRQKGGISGFPKREESPYDVFNVGHSSTSISAASGIAEARDLKKERFKVVAIIGDGSMTAGLAFEGLNWSGDRKKDLVIILNDNEMSISPNVGALSSYLNHIMTGQTANKIRKDIRNFLKTIPSIGEQVLEFSRRAEESLKALIVPGALFEDLGFTYVGPLEGHRLDHLIRNLEDVRNMEGPVLVHVITRKGKGYKFAEAEPLRFHGICPFSPETGKPAAASESPVPPSYTQVFGNTIVKLARQNPRLVAITAAMCEGTGLNAFAEEFPERFFDVGIAEQHSVTFAAGLATEGILPVVAIYSSFLQRAYDQILHDVCLQNLPVVFALDRAGFVGEDGPTHHGLFDLSYLRSIPNMVVMAPKDENELQHMLHTAVACGKPAAVRYPRGSGVGVTMDSQPFSLELGKGEVLCEGGSLAILAVGDPVHPALTAAVQLREEGIYATVVNARFVKPLDRELLLRIVRSFKKILTVEENVLTGGFGSAILEFLEENDIHGIQVKRLGIRDEFAEQATQAEQRRLYGIDEQGIAAAVRSMMNMGRSSQMEACL

Annotated regions:
phrase: GEDGPTHHGLFDLSYL
type: BINDING_SITE
name: Transketolase_BS
description: Transketolase binding site

phrase: RSAIIETVSRTGGHLASSL
type: CONSERVED_SITE
name: Transketolase_CS
description: Transketolase conserved site

phrase: PSYTQVFGNTIVKLARQNPRLVAITAAMCEGTGLNAFAEEFPERFFDVGIAEQHSVTFAAGLATEGILPVVAIYSSFLQRAYDQILHDVCLQNLPVVFALDRAGFVGEDGPTHHGLFDLSYLRSIPNMVVMAPKDENELQHMLHTAVACGKPAAVRYPRGSGVG
type: DOMAIN
name: Transketolase-like_Pyr-bd
description: Transketolase-like, pyrimidine-binding domain

phrase: PSYTQVFGNTIVKLARQNPRLVAITAAMCEGTGLNAFAEEFPERFFDVGIAEQHSVTFAAGLATEGILPVVAIYSSFLQRAYDQILHDVCLQNLPVVFALDRAGFVGEDGPTHHGLFDLSYLRSIPNMVVMAPKDENELQHMLHTAVACGKPAAVRYPR
type: DOMAIN
name: Transketolase-like_Pyr-bd
description: Transketolase-like, pyrimidine-binding domain

phrase: GKGEVLCEGGSLAILAVGDPVHPALTAAVQLREEGIYATVVNARFVKPLDRELLLRIVRSFKKILTVEENVLTGGFGSAILEFLEENDIHGIQVKRLGIRDEFAEQATQAEQRRLYGIDEQG
type: DOMAIN
name: Transketolase_C
description: Transketolase, C-terminal domain