nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MADGVDHIDIYADVGEEFNQEAEYGGHDQIDLYDDVISPSANNGDAPEDRDYMDTLPPTVGDDVGKGAAPNVVYTYTGKRIALYIGNLTRWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCNKQFLSQFEMQSRKTTQSGQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPTGPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGREMDTARTPLSEAEFEEIMNRNRAISSSAISRAVSDASVGDYGSAIETLVTAISLIKQSKVSADDRCKVLISSLQDCLHGIESKSYGSGSRRRERSRERDHSRSREKSRRHKSRSRDRHDDYYRERSRERERHRDRDRDRDRERDREREYRHR

Annotated regions:
phrase: ALYIGNLTRWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: LYIGNLTRWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKLMDLLPKRELHG
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: ALYIGNLTRWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVT
type: DOMAIN
name: CPSF6_RRM
description: Cleavage and polyadenylation specificity factor subunit 6, RNA recognition motif

phrase: IALYIGNLTRWTTDEDLTEAVHSLGVNDILEIKFFENRANGQSKGFALVGVGSEASSKKLMDLLPKRELHGQNPVVTPCN
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain
Protein sequence:
MRVKGTQMNWPNLWRWGTLMLGLVIICSASDNLWVTVYYGVPVWRDANTTLFCASDAKAHVTEVHNVWATHACVPTDPNPQELHLENVTENFNMWKNNMVEQMQEDVISLWDQSLKPCVKLTPLCVTLNCTNADLTNATKRSSTTVTTPTVSNSNTTNNSTPTTLTTTTTDGPNLGNISDEVKDCSFNVTTEIRDRQKKVHALFYRLDIVPIDKENSNNTYQQYRLINCNTSALKQACPKVSFDPIPIHYCTPAGYAILKCNDKKFNGTGPCNNVSSVQCTHGIKPVVSTQLLLNGSLAEDEIVIRSENLTDNAKTIIVHLNKSVEINCTRPSNNTRKSVNIGPGQALFYQAGDIVGDIRKAYCQINRTRWNNVLKQVAEKLKKHFKNKTIVFQPSSGGDLEITMHHFNCRGEFFYCNTTELFNKTYNGTLQDDNNSTNITLPCRIKQIVNMWQGVGQAMYAPPISGRINCVSNITGILLTRDGGNHNSTTKNETFRPGGGNIKDNWRNELYKYKVVQIEPLGIAPTRAKRRVVEREKRAVGIGAMIFGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQKFLGLWGCSGKTICTTAVPWNSSWSNKSYEEIWNNMTWIEWEREISSHTNQIYQILTESQNQQDKNEKDLLELDKWANLWNWFDITRWLWYIKIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQTPNLQQREPDRPERIEEEGGEQ

Annotated regions:
phrase: MGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQKFLGLWGCSGKTICTTAVPWNSSWSNKSYEEIWNNMTWIEWEREISSHTNQIYQILTESQNQQDKNEKDLLELDKWANLWNWFDITRWLWYIKIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWRDANTTLFCASDAKAHVTEVHNVWATHACVPTDPNPQELHLENVTENFNMWKNNMVEQMQEDVISLWDQSLKPCVKLTPLCVTLNCTNADLTNATKRSSTTVTTPTVSNSNTTNNSTPTTLTTTTTDGPNLGNISDEVKDCSFNVTTEIRDRQKKVHALFYRLDIVPIDKENSNNTYQQYRLINCNTSALKQACPKVSFDPIPIHYCTPAGYAILKCNDKKFNGTGPCNNVSSVQCTHGIKPVVSTQLLLNGSLAEDEIVIRSENLTDNAKTIIVHLNKSVEINCTRPSNNTRKSVNIGPGQALFYQAGDIVGDIRKAYCQINRTRWNNVLKQVAEKLKKHFKNKTIVFQPSSGGDLEITMHHFNCRGEFFYCNTTELFNKTYNGTLQDDNNSTNITLPCRIKQIVNMWQGVGQAMYAPPISGRINCVSNITGILLTRDGGNHNSTTKNETFRPGGGNIKDNWRNELYKYKVVQIEPLGIAPTRAKRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: VQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQKFLGLWGCSGKTICTTAVPWNSSWSNKSYEEIWNNMTWIEWEREISSHTNQIYQILTESQNQQDKNEKDLLELD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MDDRSLKLAEDFVSARYIEAGRESLRATARIMRSILAQRCCPDEGLTDAAIELILRQLSLMDTNNLAHHVGGGEREGRVVSALVRMRHFHLTHGIGRSGDLFSEQPKAAGSSLLYKITNVLMLDLIRQAGAPSTAAAVVVPMATGMTLALVLRCVAKTHMKELMKEAEAVQLQRTVTKDSTSATSAAPVQEPPMSEADRDRHDRTSLPVPATPRYVIWPRIDQKTALKCIDAAGLVPVPVQLRPAVPLARSAAPCVSTNRDSLDRGQDSIGSPSTPTSSSSLFLECHVDDVAAAVNAVGGPSQVVCVLSTTSCFAPRLPDNTVAIAQYCKKAGIPYVVNNAYGVQSRRIMTRLDAAQRLGRVDFVVQSGDKNFLVPVGGSIICSGDKERCKAVAALYAGRASMSPIVDLFITALSLGRRGMQTLWSDRYKCRARLIRQLRVFARERREVLLVDDSDDDKADEDTVGGSQRTSNAVVPRNDISVAVTMRAYGLPAAEASSSGAQLGSEQAGRVTNWAAARALGAQLFRSAVTGPRVITPAPSTPTTIAGCTFRNYGMHQDREPPCPLLVIACGIGMSESEVDALMARLRDLWPVPA

Annotated regions:
Protein sequence:
MDIIDTLDNYINFQQPSLYYAMANIMFNPIFWNVAARVEYRSHALTKLAGNNALRACAAFAATIFSLGILRDYLYVQAIELQPILPLLESNVFKAIAVVLFLCGNVLVLSSMWALGVTGTYLGDYFGILKDSRVTGFPFNVCENPMYTGCTISFLGTALWYASPSGLLLTLVVHVVYRVALRFEGPFTAMIYATKDK

Annotated regions:
Protein sequence:
MRTAALIVAAGRGSRACGPLPKQYARIGGLPVLARAMAAFADHPGIDLIQVVIGGGDATLYKSATASASAKLLAPVEGGATRQASVRNGLRALRTHQPGRVLIHDGARPFVSADIIDRVLAALSDAPAAIAAVPLADTVKKEGPDRRVAATLERAGLWRAQTPQGFGFADILAAHEAAYAAGHVDMTDDAAVAEWAGLPVALVAGSEANRKLTTAEDLAMADRLCAGAPDVRTGSGFDVHRFTAGDHVWLCGVRIAHTHGLEGHSDADVGLHALTDALLGAIGDGDIGQHFPNTDPRWKGAPSHLFLAEAAERVRRRGGNIGNVDVTLLCEAPKISPHREAMRARIAHILAMDVGRVGVKATTTEGLGFTGRREGIAALASATVIIAPHPSA

Annotated regions:
phrase: RTGSGFDVHRFTAGDHVWLCGVRIAHTHGLEGHSDADVGLHALTDALLGAIGDGDIGQHFPNTDPRWKGAPSHLFLAEAAERVRRRGGNIGNVDVTLLCEAPKISPHREAMRARIAHILAMDVGRVGVKATTTEGLGFTGRREGIAALASAT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: VLIHDGA
type: CONSERVED_SITE
name: ISPD_synthase_CS
description: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site

phrase: NRKLTTAEDLAMADRLCAGAPDVRTGSGFDVHRFTAGDHVWLCGVRIAHTHGLEGHSDADVGLHALTDALLGAIGDGDIGQHFPNTDPRWKGAPSHLFLAEAAERVRRRGGNIGNVDVTLLCEAPKISPHREAMRARIAHILAMDVGRVGVKATTTEGLGFTGRREGIAALASATV
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: VRTGSGFDVHRFTAGDHVWLCGVRIAHTHGLEGHSDADVGLHALTDALLGAIGDGDIGQHFPNTDPRWKGAPSHLFLAEAAERVRRRGGNIGNVDVTLLCEAPKISPHREAMRARIAHILAMDVGRVGVKATTTEGLGFTGRREGIAALASATVI
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: SDADVGLHALTDALL
type: CONSERVED_SITE
name: MECDP_synthase_CS
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site

phrase: RTGSGFDVHRFTAGDHVWLCGVRIAHTHGLEGHSDADVGLHALTDALLGAIGDGDIGQHFPNTDPRWKGAPSHLFLAEAAERVRRRGGNIGNVDVTLLCEAPKISPHREAMRARIAHILAMDVGRVGVKATTTEGLGFTGRREGIAALASAT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RTGSGFDVHRFTAGDHVWLCGVRIAHTHGLEGHSDADVGLHALTDALLGAIGDGDIGQHFPNTDPRWKGAPSHLFLAEAAERVRRRGGNIGNVDVTLLCEAPKISPHREAMRARIAHILAMDVGRVGVKATTTEGLGFTGRREGIAALASAT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Protein sequence:
MLFSALLLEVIWILAADGGQHWTYEGPHGQDHWPASYPECGNNAQSPIDIQTDSVTFDPDLPALQPHGYDQPGTEPLDLHNNGHTVQLSLPSTLYLGGLPRKYVAAQLHLHWGQKGSPGGSEHQINSEATFAELHIVHYDSDSYDSLSEAAERPQGLAVLGILIEVGETKNIAYEHILSHLHEVRHKDQKTSVPPFNLRELLPKQLGQYFRYNGSLTTPPCYQSVLWTVFYRRSQISMEQLEKLQGTLFSTEEEPSKLLVQNYRALQPLNQRMVFASFIQAGSSYTTGEMLSLGVGILVGCLCLLLAVYFIARKIRKKRLENRKSVVFTSAQATTEA

Annotated regions:
phrase: QHWTYEGPHGQDHWPASYPECGNNAQSPIDIQTDSVTFDPDLPALQPHGYDQPGTEPLDLHNNGHTVQLSLPSTLYLGGLPRKYVAAQLHLHWGQKGSPGGSEHQINSEATFAELHIVHYDSDSYDSLSEAAERPQGLAVLGILIEVGETKNIAYEHILSHLHEVRHKDQKTSVPPFNLRELLPKQLGQYFRYNGSLTTPPCYQSVLWTVFYRRSQISMEQLEKLQGTLFSTEEEPSKLLVQNYRALQPLNQRMVFAS
type: DOMAIN
name: CA_dom
description: Alpha carbonic anhydrase domain

phrase: WTYEGPHGQDHWPASYPECGNNAQSPIDIQTDSVTFDPDLPALQPHGYDQPGTEPLDLHNNGHTVQLSLPSTLYLGGLPRKYVAAQLHLHWGQKGSPGGSEHQINSEATFAELHIVHYDSDSYDSLSEAAERPQGLAVLGILIEVGETKNIAYEHILSHLHEVRHKDQKTSVPPFNLRELLPKQLGQYFRYNGSLTTPPCYQSVLWTVFYRRSQISMEQLEKLQGTLFSTEEEPSKLLVQNYRALQPLNQRMVFAS
type: DOMAIN
name: CA_dom
description: Alpha carbonic anhydrase domain

phrase: HGQDHWPASYPECGNNAQSPIDIQTDSVTFDPDLPALQPHGYDQPGTEPLDLHNNGHTVQLSLPSTLYLGGLPRKYVAAQLHLHWGQKGSPGGSEHQINSEATFAELHIVHYDSDSYDSLSEAAERPQGLAVLGILIEVGETKNIAYEHILSHLHEVRHKDQKTSVPPFNLRELLPKQLGQYFRYNGSLTTPPCYQSVLWTVFYRRSQISMEQLEKLQGTLFSTEEEPSKLLVQNYRALQPLNQRMVFAS
type: DOMAIN
name: CA_dom
description: Alpha carbonic anhydrase domain
Protein sequence:
MSVMFDPQAAIYPFPPKPTPLNDDEKQFYREKIKRLLKERNAVMVAHYYTDPEIQQLAEETGGCISDSLEMARFGAKHAASTLLVAGVRFMGETAKILSPAKTILMPTLAAECSLDLGCPIDEFSAFCDAHPDRTVVVYANTSAAVKARADWVVTSSIAVELIEHLDSLGEKIIWAPDRHLGNYVQKQTGADVLCWQGACIVHDEFKTQALTRLKKIYPDAALLVHPESPQSIVEMADAVGSTSQLIKAAKTLPHRQLIVATDRGIFYKMQQAVPEKELLEAPTAGEGATCRSCAHCPWMAMNGLKAIAEGLEQGGAAHEIQVDAALREGALLPLNRMLDFATTLRA

Annotated regions:
Protein sequence:
MGSHGKGKRDRSGRQKKRRDESESGSESESYTSDSDGSDDLSPPRSSRRKKGSSSRRTRRRSSSDDSSDSDGGRKSKKRSSSKDYSEEKVTEYMSKKAQKKALRAAKKLKTQSVSGYSNDSNPFGDSNLTETFVWRKKIEKDVHRGVPLEEFSVKAEKRRHRERMTEVEKVKKRREERAVEKARHEEEMALLARERARAEFHDWEKKEEEFHFDQSKVRSEIRLREGRLKPIDVLCKHLDGSDDLDIELSEPYMVFKKKKVRIGIWLNFQLSITNVYVEAEYKNDSACLLLRSRVDILLNKGLTVKDMEELRDDIKMYLDLDRATPTRVQYWEALIVVCDWELAEARKRDALDRARVRGEEPPAELLAQERGLHAGVEADVRKLLDGKTHAELVELQLDIESQLRSGSAKVVEYWEAVLKRLEIYKAKACLKEIHAEMLRRHLHRLEQLSEGEDDVEVNPGLTRVVEENEEEINDTNLSDAEEAFSPEPVAEEEEADEAAEAAGSFSPELMHGDDREEAIDPEEDKKLLQMKRMIVLEKQKKRLKEAMDSKPAPVEDNLELKAMKAMGAMEEGDAIFGSNAEVNLDSEVYWWHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKIKAPIYTIEKDGTSAETCMIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHLYFNFKRHRYRR

Annotated regions:
phrase: WHDKYRPRKPKYFNRVHTGYEWNKYNQTHYDHDNPPPKIVQGYKFNIFYPDLVDKIKAPIYTIEKDGTSAETCMIRFHAGPPYEDIAFRIVNKEWEYSHKKGFKCTFERGILHLYFNFKRHRYR
type: DOMAIN
name: Cactin_C
description: Splicing factor Cactin, C-terminal

phrase: RERARAEFHDWEKKEEEFHFDQSKVRSEIRLREGRLKPIDVLCKHLDGSDDLDIELSEPYMVFKKK
type: DOMAIN
name: Cactin_central
description: Splicing factor cactin, central domain

phrase: KGLTVKDMEELRDDIKMYLDLDRATPTRVQYWEALIVVCDWELAEARKRDALDRARVRGEEPPAELLAQERGLHAGVEADVRKLLDGKTHAELVELQLDIESQLRSGSAKVVEYWEAVLKRLEIYKAKACLKEI
type: DOMAIN
name: Cactin_central
description: Splicing factor cactin, central domain
Protein sequence:
MTDVARILKEARDQGRMTALDYASLIFDEFMELHGDRQFADDGSIVGGIAYLADQPVTVIGIQKGKNLQDNLARNFGQPHPEGYRKALRLMKQAEKFGRPVITFINTAGAYPGVGAEERGQGEAIARNLMEMSDLKVPIIAIIIGEGGSGGALALAVADQVWMLENTMYAVLSPEGFASILWKDGSRATEAAELMKITAAELYQMGVIDRIIPERGYFSSEIVEMIKLHLIDEITQLQAKPLEELLDQRYQRFRKY

Annotated regions:
phrase: MTDVARILKEARDQGRMTALDYASLIFDEFMELHGDRQFADDGSIVGGIAYLADQPVTVIGIQKGKNLQDNLARNFGQPHPEGYRKALRLMKQAEKFGRPVITFINTAGAYPGVGAEERGQGEAIARNLMEMSDLKVPIIAIIIGEGGSGGALALAVADQVWMLENTMYAVLSPEGFASILWKDGSRATEAAELMKITAAELYQMGVIDRIIPERGYFSSEIVEMIKLHLIDEIT
type: DOMAIN
name: COA_CT_C
description: Acetyl-coenzyme A carboxyltransferase, C-terminal
Protein sequence:
MAKNLVLWLVIAAVLLTIFNNFSTEPETGKISYSEFVEEVQAGRVSRVLIDGFTISGQRQTGEGFTTIRPAVQDPKLIDDLLSNNVLIEGKQPEGQSIWTQLLVAAFPILIIIAIFMFFMRQMQGGAGGKGGPMSFGKSKARMMSEDQIKTTFDDVAGVEEAKEEVAELVDYLRDPGKFQRLGGHIPRGVLMAGSPGTGKTLLAKAIAGEAKVPFFSISGSDFVEMFVGVGASRVRDMFDQAKKHAPCIIFIDEIDAVGRSRGVGLGGGNDEREQTLNQLLVEMDGFEGTEGIIVIAATNRPDVLDPALLRPGRFDRQVHVGLPDIRGRDQILKVHMRKVPLGDDVRSDLIARGTPGFSGADLANLVNEAALFAARFGKRTVGMEEFEKAKDKIMMGAERRSMVMSYKERLNTAYHESGHAIVGRLMPEHDPVYKVSIIPRGRALGVTMFLPAEDRYSHSRQGILSQICSLYGGRIAEEMTLGKEGVTTGASNDIQRATTLARNMVTKWGLSETLGPLLYAEEDDDPFGRGMGGGAKAKSEETQRMIDAEVKQIIDDCYQRAYKILTDNRDILDTMTEALMKYETIGSKQLDELMARQPVSAPDGWQEEPVKAEPAAAQADADMPVADEPVDAEHAAEVDETDVHVDEVEDSNPWNEPDTDEDSRDNGPR

Annotated regions:
phrase: LVLWLVIAAVLLTIFNNFSTEPETGKISYSEFVEEVQAGRVSRVLIDGFTISGQRQTGEGFTTIRPAVQDPKLIDDLLSNNVLIEGKQ
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular

phrase: IPRGVLMAGSPGTGKTLLAKAIAGEAKVPFFSISGSDFVEMFVGVGASRVRDMFDQAKKHAPCIIFIDEIDAVGRSRGVGLGGGNDEREQTLNQLLVEMDGFEGTEGIIVIAATNRPDVLDPALLRPGRFDRQVHVGLP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: DVRSDLIARGTPGFSGADLANLVNEAALFAARFGKRTVGMEEFE
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: MVMSYKERLNTAYHESGHAIVGRLMPEHDPVYKVSIIPRGRALGVTMFLPAEDRYSHSRQGILSQICSLYGGRIAEEMTLGKEGVTTGASNDIQRATTLARNMVTKWGLSETLGPLLYAEEDDDPFGRGMGGGAKAKSEETQRMIDAEVKQIIDDCYQRAYKILTDNRDILDTMTEALMKYETIGSKQLDE
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: IIVIAATNRPDVLDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: VLMAGSPGTGKTLLAKAIAGEAKVPFFSISGSDFVEMFVGVGASRVRDMFDQAKKHAPCIIFIDEIDAVGRSRGVGLGGGNDEREQTLNQLLVEMDGFEGTEGIIVIAATNRPDVLDPALLRPGRFDRQVHV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core
Protein sequence:
MGQKIHPLGFRIGITQKHRSSWFANSKDYPVLLQEDHKIRSFIHSKLSNASIAKIEINRKVDQVEILIATARPGIVLGKSGAGIESLRKSLSLILDPSKQLRVNVVEIADPDSEATLVAEFITQQLEKRVAFRRAVRQAVQRAQRANTQGVKIQVSGRLNGAEIARSEWVREGRVPLQTLRADIDYCHRQAHTTYGVLGVKVWLFKGEILPESKSLESAYNQETPDSTAS

Annotated regions:
phrase: IRSFIHSKLSNASIAKIEINRKVDQVEILIATARPGIVLGKSGAGIESLRKSLSLILDPSKQLRVNVVEI
type: DOMAIN
name: KH_dom_type_2
description: K Homology domain, type 2

phrase: KIRSFIHSKLSNASIAKIEINRKVDQVEILIATARPGIVLGKSGAGIESLRKSLSLILDPSKQLRVNVVEIADP
type: DOMAIN
name: KH_dom_type_2
description: K Homology domain, type 2

phrase: KVDQVEILIATARPGIVLGKSGAGIESLRKSLSLILDPSKQLRVNVVEIADPDSEATLVAEFITQQL
type: DOMAIN
name: KH_dom
description: K Homology domain

phrase: ITQQLEKRVAFRRAVRQAVQRAQRANTQGVKIQVSGRLNGAEIARSEWVREGRVPLQTLRADIDYCHRQAHTTYGVLGVKVW
type: DOMAIN
name: Ribosomal_uS3_C
description: Small ribosomal subunit protein uS3, C-terminal

phrase: ARSEWVREGRVPLQTLRADIDYCHRQAHTTYGVL
type: CONSERVED_SITE
name: Ribosomal_uS3_CS
description: Small ribosomal subunit protein uS3, conserved site
Protein sequence:
MKVKETMRNYQHYLWKWGIMLLGMLMICSAADQWWVTVYYGVPVWKEANPTLFCASDAKTYKTEAHNVWATHACVPTDPNPQEKVLENVTEEFNMWKNNMVEQMHEDIISLWDESLKPCVKLTPLCVTLNCTDVSMNETNSKTTPSTSTPTSASTTYSGEKMEDGEMKNCSFNVTTILRDKMQTEFALFYRLDVVPLDNSSSTSYRLINCNSSTITQACPKISFEPIPIHYCAPAGFAILKCNDKGFNGTGTCRNVSTVQCTHGIKPVVSTQLLLNGSLAEEEVVIRSSNFSDNAKTIIVQLNETVAINCTRPGNNTRRSITMGPGKVFYTNEIIGNIRRAYCTINETKWNSTLQKIAAKLGEQFNKTEIVFTHSSGGDPEVVMHSFNCGGEFFYCNTTPLFNSAWNRNKSKDTWSIKGSNNSTGGNNTIILQCKIKQIINMWQRVGKAMYAPPIRGQINCLSNITGLLLTRDGGNISSTNETFRPGGGDMRDNWRSELYKYKVVQIEPLGLAPTKAKRRVVQREKRAVGTLGAMFLGFLGAAGSTMGAASITLTAQARQLLSGIVQQQNNLLKAIDAQQHMLQLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGRLICTTAVPWNNSWSNNRSVDQIWDNMTWMQWEREIDNYTGVIYRLLEESQNQQEKNEQELLELDKWASLWNWFDITRWLWYIKIFIMIVGGLIGLRIVFAVISVVNRVRQGYSPLSFQTRFPTPRGPDRPEGIEEEGGDRDRGTSIRLVD

Annotated regions:
phrase: MGAASITLTAQARQLLSGIVQQQNNLLKAIDAQQHMLQLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGRLICTTAVPWNNSWSNNRSVDQIWDNMTWMQWEREIDNYTGVIYRLLEESQNQQEKNEQELLELDKWASLWNWFDITRWLWYIKIFIMIVGGLIGLRIVFAVISVVNRVRQGYSPLSFQ
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: WVTVYYGVPVWKEANPTLFCASDAKTYKTEAHNVWATHACVPTDPNPQEKVLENVTEEFNMWKNNMVEQMHEDIISLWDESLKPCVKLTPLCVTLNCTDVSMNETNSKTTPSTSTPTSASTTYSGEKMEDGEMKNCSFNVTTILRDKMQTEFALFYRLDVVPLDNSSSTSYRLINCNSSTITQACPKISFEPIPIHYCAPAGFAILKCNDKGFNGTGTCRNVSTVQCTHGIKPVVSTQLLLNGSLAEEEVVIRSSNFSDNAKTIIVQLNETVAINCTRPGNNTRRSITMGPGKVFYTNEIIGNIRRAYCTINETKWNSTLQKIAAKLGEQFNKTEIVFTHSSGGDPEVVMHSFNCGGEFFYCNTTPLFNSAWNRNKSKDTWSIKGSNNSTGGNNTIILQCKIKQIINMWQRVGKAMYAPPIRGQINCLSNITGLLLTRDGGNISSTNETFRPGGGDMRDNWRSELYKYKVVQIEPLGLAPTKAKRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: AQARQLLSGIVQQQNNLLKAIDAQQHMLQLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGRLICTTAVPWNNSWSNNRSVDQIWDNMTWMQWEREIDNYTGVIYRLLEESQNQQEKNEQELLELD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MNPTFQDIILTLQRYWGERGCALLQPYDMEVGAGTSHTATFLRALGPEPWKAAYVQPSRRPKDGRYGENPNRLQHYYQFQVVLKPAPADILELYLGSLEALGFDLRKNDVRFVEDDWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGIDCKPITGEITYGLERLAMYLQGVESVFDLRWTDGLTYRDVYHQNEVEQSAYNFEHSDVGFLLTAFSAHEKKAQELMVAQLALPAYEQVLKAAHTFNLLDARGAISVTERAAYIGRIRNLARSVAKSYLDSRARLGFPMAPRAWADEVLANIEKQTQKKAAAA

Annotated regions:
Protein sequence:
MADGCCPGNTTAIPAVPTITTYPVKGGFRHALCLPSSCHSRMWQLVTCQESCQPSIGAPSGCDPASCQPTRLPATSCVGFVCQPMCSHAACYQSGTGQSPCLVSSCQPSCSESTCCQEKCCDASPCQQSSCQESVCMSGSCQAACGQSVCCDAGSCQPSCSEVTSCPETSCLPTICTASPCQPTWCQGSSCQPVSGEGQPCKSTYYQPICYIFKPCQSALYMPVPCQPSTCVFSSCNTTCCVPSHCQPPHCQLVPSTCFIYQPVANCQAPCSTKNCCKPASCDTVISGQPTCDGPPSYNQSGCKSACCVTGLGTSPSSGSNCLPTSCQPSCESSFCKATLC

Annotated regions:
Protein sequence:
MTSTKDKTAITPTRENDYPEWYQQVVKASDLAENSPVRGSMVIKPWGYGIWENIQRQLDDRIKETGHENAYFPLFIPLSFLEKEAAHIEGFAKECAVVTHHRLEEKDGRLIPAGPLEEPLIVRPTSETIIGDSFSRWVESYRDLPLLINQWANVVRWEMRPRIFLRTTEFLWQEGHTAHATHEEALQETMTMLEVYRSFVEDVLAIPVIVGEKSPGERFPGAENTFTLEAMMQDRKALQSCTSHYLGQNFAKGSNIRFSNMEGQLEYAYTTSWGMTTRLIGSLIMCHGDDDGLRLPPRIAHKQIVIVPVIPKPELEAQVLEYAENLAAELRKQIFYGKPLTVHIDKRDKRGGEKNWEWVKKGVPLRLEVGPRDINEQAVMVARRDQSPKNKQSLPKQQFVQQAASILEDIQRNYYVQAATYRDQHIYRHLETFEEMRAFFTPKNEEKPEIHGGFVLAKWCGDPVTEEMLSDLKVTIRCLPVKQSGTKGRCILTGREATLDAIFAKSY

Annotated regions:
phrase: EEPLIVRPTSETIIGDSFSRWVESYRDLPLLINQWANVVRWEMRPRIFLRTTEFLWQEGHTAHATHEEALQETMTMLEVYRSFVEDVLAIPVIVGEKSPGERFPGAENTFTLEAMMQDRKALQSCTSHYLGQNFAKGSNIRFSNMEGQLEYAYTTSWGMTTRLIGS
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: DYPEWYQQVVKASDLAENSPVRGSMVIKPWGYGIWENIQRQLDDRIKETGHENAYFPLFIPLSFLEKEAAHIEGFAKECAVVTHHRLEEKDGRLIPAGPLEEPLIVRPTSETIIGDSFSRWVESYRDLPLLINQWANVVRWEMRPRIFLRTTEFLWQEGHTAHATHEEALQETMTMLEVYRSFVEDVLAIPVIVGEKSPGERFPGAENTFTLEAMMQDRKALQSCTSHYLGQNFAKGSNIRFSNMEGQLEYAYTTSWGMTTRLIGSLI
type: DOMAIN
name: ProRS_core_arch_euk
description: Prolyl-tRNA synthetase, catalytic domain

phrase: IHGGFVLAKWCGDPVTEEMLSDLKVTIRCLPVKQSGTKGRCILTGREATLDAIFAKS
type: DOMAIN
name: Pro-tRNA_ligase_II_C
description: Proline-tRNA ligase, class II, C-terminal

phrase: QIVIVPVIPKPELEAQVLEYAENLAAELRKQIFYGKPLTVHIDKRDKRGGEKNWEWVKKGVPLRLEVGPRDINEQAVMVARRDQSPKNKQSLPKQQF
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: RGSMVIKPWGYGIWENIQRQLDDRIKETGHENAYFPLFIPLSFLEKEAAHIEGFAKECAVVTHHRLEEKDGRLIPAGPLEEPLIVRPTSETIIGDSFSRWVESYRDLPLLINQWANVVRWEMRPRIFLRTTEFLWQEGHTAHATHEEALQETMTMLEVYRSFVEDVLAIPVIVGEKSPGERFPGAENTFTLEAMMQDRKALQSCTSHYLGQNFAKGSNIRFSNMEGQLEYAYTTSWGMTTRLIGSLIMCHGDDDGLRL
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: FEEMRAFFTPKNEEKPEIHGGFVLAKWCGDPVTEEMLSDLKVTIRCLPVKQSGTKGRCILTGREATLDAIFAKS
type: DOMAIN
name: Pro-tRNA_ligase_II_C
description: Proline-tRNA ligase, class II, C-terminal
Protein sequence:
MLKILSPAKVNLHLRVLRKREDNYHDLATLMQKVSLYDELEFQPSNRGIQLRCPGFFLPENEENIVFRAAKKILSFSGCPTGVTITLRKNIPLAAGLGGGSSNAAMTLLALNKLFRLNFSTGELMKIGATLGADVPFFLFHGPAWAYGIGDRLKAALDVPKVWFVLINPGFEVSTRVIYEKLNLGLTKEIIHYSIPRFLSMEDMAAGLHNDLESVTLKMHPSLQEIKDLLCSYGAAGALMSGSGPTVFGIFENEDKAKEAETVLGKPGTWAVFCVRSID

Annotated regions:
phrase: MAAGLHNDLESVTLKMHPSLQEIKDLLCSYGAAGALMSGSGPTVFGIFENEDKAKEAETVL
type: DOMAIN
name: GHMP_kinase_C_dom
description: GHMP kinase, C-terminal domain

phrase: NIVFRAAKKILSFSGCPTGVTITLRKNIPLAAGLGGGSSNAAMTLLALNKLFRLNFSTGELMKIGATLGADVPFFLFH
type: DOMAIN
name: GHMP_kinase_N_dom
description: GHMP kinase N-terminal domain
Protein sequence:
MTHALDTLALNQLFTEARTHNAWRDEPVAPELLRQLHELAKWGPTAMNCCPLRVRFIVGAEARARLLPLMSEGNRAKTAAAPVIAILGRDVDFHQHMPTLAPHMAGARERFADQPAQREAMSQLNGALEAGYFILAARALGLDCGPMGGFDAAAVDAEFWAGTAVRSMIVCNLGHGDPAGLRPRAPRLDFDTACAVL

Annotated regions:
phrase: RTHNAWRDEPVAPELLRQLHELAKWGPTAMNCCPLRVRFIVGAEARARLLPLMSEGNRAKTAAAPVIAILGRDVDFHQHMPTLAPHMAGARERFADQPAQREAMSQLNGALEAGYFILAARALGLDCGPMGGFDAAAVDAE
type: DOMAIN
name: Nitroreductase
description: Nitroreductase
Protein sequence:
MSKKIKLNDEIIVRVGKYKGKTGKIKKIFSDGKAIIEGINISKKHKKPTPNEKQSGGIFEKEQPISLSNVAIFNIDTNKPDKVKFKIEKGKKYRIFKSNGKKIK

Annotated regions:
phrase: KIKLNDEIIVRVGKYKGKTGKIKKIFS
type: DOMAIN
name: KOW
description: KOW

phrase: GKAIIEGINISKKHKKPTPNEKQSGGIFEKEQPISLSNVA
type: DOMAIN
name: Ribosomal_uL24_KOW
description: Large ribosomal subunit protein uL24, KOW domain

phrase: DEIIVRVGKYKGKTGKIKKIFSDGKAI
type: DOMAIN
name: KOW
description: KOW
Protein sequence:
MSGDSERAVAPGVVPAPCASKVELRLSCRHLLDRDPLTKSDPSVVLLQQAQGQWLQVDRTEVVKSSLHPVFSKVFTVDYYFEGVQKLRFEVYDTHGPSGLTCQDDDFLGGMECTLGQIVAQKKMTRPLLLRFGRNAGKSTITVIAEDISGNNGYVELSFQARKLDDKDLFSKSDPFLELYRVNDDGSEQLVYRTEVVKNNLNPVWEPFKVSLNSLCSCEETRPLKCLVWDYDSRGKHDFIGDFTTTFAEMQKAFEEEQQAQWDCVNAKYKQKKRNYKNSGVVILADLKLHRVHSFLDYIMGGCQIHCTVAIDFTASNGDPRNSCSLHHINPYQPNEYLRALVAVGEVCQDYDSDKRFSALGFGARIPPKYEVSHDFAINFNPEDDECEGIQGVVEAYQNCLPKVQLYGPTNVAPIISKVARMAAAEESTGEASQYYILLILTDGVVTDMSDTREAIVRASHLPMSVIIVGVGNADFTDMQILDGDDGVLRSPRGEPALRDIVQFVPFRELKNASPAALAKCVLAEVPKQVVEYYSHKELPPRSLGAQTGEAAASSAP

Annotated regions:
phrase: SLHHINPYQPNEYLRALVAVGEVCQDYDSDKRFSALGFGARIPPKYEVSHDFAINFNPEDDECEGIQGVVEAYQNCLPKVQLYGPTNVAPIISKVARMAAAEESTGEASQYYILLILTDGVVTDMSDTREAIVRASHLPMSVIIVGVGNADFTDMQILDGDDGVLRSPRGEPALRDIVQFVPFRELKNASPAALAKCVLAEVPKQVVEYYSHKELP
type: DOMAIN
name: Copine_C
description: Copine, C-terminal

phrase: HCTVAIDFTASNGDPRNSCSLHHINPYQPNEYLRALVAVGEVCQDYDSDKRFSALGFGARIPPKYEVSHDFAINFNPEDDECEGIQGVVEAYQNCLPKVQLYGPTNVAPIISKVARMAAAEESTGEASQYYILLILTDGVVTDMSDTREAIVRASHLPMSVIIVGVGNADFTDMQILDGDDGVLRSPRGEPALRDIVQF
type: DOMAIN
name: VWF_A
description: von Willebrand factor, type A

phrase: QARKLDDKDLFSKSDPFLELYRVNDDGSEQLVYRTEVVKNNLNPVWEPFKVSLNSLCSCEETRPLKCLVWDYDSRGKHDFIGDFTTTFAEMQKAFEEEQQAQ
type: DOMAIN
name: C2_dom
description: C2 domain

phrase: LSCRHLLDRDPLTKSDPSVVLLQQAQGQWLQVDRTEVVKSSLHPVFSKVFTVDYYFEGVQKLRFEVYDTHGPSGLTCQDDDFLGGMECTLGQIVAQKK
type: DOMAIN
name: C2_dom
description: C2 domain

phrase: NAGKSTITVIAEDISGNNGYVELSFQARKLDDKDLFSKSDPFLELYRVNDDGSEQLVYRTEVVKNNLNPVWEPFKVSLNSLCSCEETRPLKCLVWDYDSRGKHDFIGDFTTTFAEMQKAFEEEQQAQW
type: DOMAIN
name: C2_dom
description: C2 domain

phrase: MSGDSERAVAPGVVPAPCASKVELRLSCRHLLDRDPLTKSDPSVVLLQQAQGQWLQVDRTEVVKSSLHPVFSKVFTVDYYFEGVQKLRFEVYDTHGPSGLTCQDDDFLGGMECTLGQIVAQKKMTRP
type: DOMAIN
name: C2_dom
description: C2 domain

phrase: GYVELSFQARKLDDKDLFSKSDPFLELYRVNDDGSEQLVYRTEVVKNNLNPVWEPFKVSLNSLCSCEETRPLKCLVWDYDSRGKHDFIGDFTTTFAEMQKAFEEEQQAQWDCV
type: DOMAIN
name: C2B_Copine
description: Copine, C2B domain

phrase: KKRNYKNSGVVILADLKLHRVHSFLDYIMGGCQIHCTVAIDFTASNGDPRNSCSLHHINPYQPNEYLRALVAVGEVCQDYDSDKRFSALGFGARIPPKYEVSHDFAINFNPEDDECEGIQGVVEAYQNCLPKVQLYGPTNVAPIISKVARMAAAEESTGEASQYYILLILTDGVVTDMSDTREAIVRASHLPMSVIIVGVGNADFTDMQILDGDDGVLRSPRGEPALRDIVQFVPFRELKNASPAALAKCVLAEVPK
type: DOMAIN
name: Copine_C
description: Copine, C-terminal

phrase: TVIAEDISGNNGYVELSFQARKLDDKDLFSKSDPFLELYRVNDDGSEQLVYRTEVVKNNLNPVWEPFKVSLNSLCSCEETRPLKCLVWDYDSRGKHDFIGDFTTTFAEMQKAFEEEQ
type: DOMAIN
name: C2_dom
description: C2 domain

phrase: KVELRLSCRHLLDRDPLTKSDPSVVLLQQAQGQWLQVDRTEVVKSSLHPVFSKVFTVDYYFEGVQKLRFEVYDTHGPSGLTCQDDDFLGGMECTLGQIVAQKKMTR
type: DOMAIN
name: C2_dom
description: C2 domain

phrase: QIHCTVAIDFTASNGDPRNSCSLHHINPYQPNEYLRALVAVGEVCQDYDSDKRFSALGFGARIPPKYEVSHDFAINFNPEDDECEGIQGVVEAYQNCLPKVQLYGPTNVAPIISKVARMAAAEESTGEASQYYILLILTDGVVTDMSDTREAIVRASHLPMSVIIVGVGNADFTDMQILDGDDGVLRSPRGEPALRDIVQFVPFRE
type: DOMAIN
name: VWF_A
description: von Willebrand factor, type A
Protein sequence:
MRPVRLIACGSVDDGKSTLIGRLLHDTGAVPADQLAALGPAPDLSRLLDGLAAEREQGVTIDVAHRPFDLDGRRFILADAPGHEQYTRNMATAASTADVAVVLVDARKTLQPQTRRHLRLLALMGVRRVLLAVNKMDLVDHASSPFHRIESEFRAFASSLAMIDLTAIPLSALTGAGVTRRDPVLSWHDGPLLSEWLAATPLPAVTDSPFRLPVQTVIRHGEHRSFAGRIAAGAVRPGDPVRVLPSGAEAAVATVTGAGPSVSLTLDRLVEVSRGDWLVSPDAPPAVADQFEAHLVWMSDQPLLPGRTHDLKIGTATVPARVMEIRHRVDPDTGEALAARTLALNDIGVVTLSLDVPVPFEPYNDNRDLGGFVLIDRMTSATAGAGMIRFALRRATNIRPQPLSVSRQDRAVLKGQHPLVLWFTGLSGVGKSTIADRVEQRLFAAGLHSTLLDGDNVRGGLNRDLGFTDADRVENIRRVAEVARLMTDAGLIVLVAFISPFRAEREMARGLMAPGEFLEIHIDAPLAVVESRDVKGLYARARAGRLANFTGIDSPYEPPTAPDLRIDTTACSCEQAADLIMDLIRSRQGR

Annotated regions:
phrase: VADQFEAHLVWMSDQPLLPGRTHDLKIGTATVPARVMEIRHRVDPDTGEALAARTLALNDIGVVTLSLDVPVPFEPYNDNRDLGGFVLIDRMTSATAGAGM
type: DOMAIN
name: CysN_NoDQ_III
description: Sulfate adenylyltransferase subunit CysN, Domain III

phrase: MRPVRLIACGSVDDGKSTLIGRLLHDTGAVPADQLAALGPAPDLSRLLDGLAAEREQGVTIDVAHRPFDLDGRRFILADAPGHEQYTRNMATAASTADVAVVLVDARKTLQPQTRRHLRLLALMGVRRVLLAVNKMDLVDHASSPFHRIESEFRAFASSLAMIDLTAIPLSALTGAGVTRRDPVLSWHDGPLLSEWLAATPLPA
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: RLIACGSVDDGKSTLIGRLLHDTGAVPADQLAALGPAPDLSRLLDGLAAEREQGVTIDVAHRPFDLDGRRFILADAPGHEQYTRNMATAASTADVAVVLVDARKTLQPQTRRHLRLLALMGVRRVLLAVNKMDLVDHASSPFHRIESEFRAFASSLAMIDLTAIPLSALTGAGV
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: DGLAAEREQGVTIDV
type: CONSERVED_SITE
name: G_TR_CS
description: Tr-type G domain, conserved site

phrase: QFEAHLVWMSDQPLLPGRTHDLKIGTATVPARVMEIRHRVDPDTGEALAARTLALNDIGVVTLSLDVPVPFEPYNDNRDLGGFVLIDRMTSATAGAGMI
type: DOMAIN
name: GTP-eEF1A_C
description: GTP-eEF1A, C-terminal domain

phrase: RLIACGSVDDGKS
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: EQGVTIDV
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: ILADAPGHEQ
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: TAASTADVAVV
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: VLLAVNKMD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain