nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MPDPATYRPAPGSIPVEPGVYRFRDPHGRVIYVGKAKSLRSRLNSYFADISGLAPRTRQMVMTASSVEWTVVGTEVEALQLEYNWIKEFDPRFNIRYRDDKSYPVLAVTLNEEYPRLKVYRGPRRKGVRYFGPYSHAWAIRETVDLLTRVFPARTCSNGVFKRHSQIDRPCLLGYIDKCSAPCVGRVSAEQHRQIVQDFCDFLAGKTDRLIREMEQQMTAAAEDLDFERAARLRDNIGAMRRAMEKQTVVLGDGTDADVVAFADDELEAAVQVFHVRGGRVRGQRGWVIEKSGEPGESTLEYLVEQFLTQFYGDQAELGGASDAGGDEASNPVPKQVLVPVLPETTDELETWLSQLRGSRVALRVPQRGDKRALAETVKRNAEGALNQHKLKRAGDFTARSAALQSIQENLGLQDAPLRIECIDISHVQGTDVVASLVVFEDGLPRKSDYRHFAIREAAGDGRSDDVASIAEVTRRRFHRHLRDMQEPGEMVAEGRSRRFAYPPNLFVVDGGAPQVNAAQAVLDDLGISDVAVIGLAKRLEEVWVPNLDGTAPDPIIFPRNSDGLYLLQRVRDEAHRFAISYHRSKRSKRMTASALDSVRGLGEHRRKALVTHFGSLARLKQATVEEITEVPGIGAATARAVLDALGIEAPPEPGAEAPPDSGAAAAVMGNDQSRVPG

Annotated regions:
phrase: DRLIREMEQQMTAAAEDLDFERAARLRDNIGAM
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: VEPGVYRFRDPHGRVIYVGKAKSLRSRLNSYFADISGLAPRTRQMVMTASSVEWTVVGTEVEALQLEYNWIKEFDPRFN
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: EPGVYRFRDPHGRVIYVGKAKSLRSRLNSYFADISGLAPRTRQMVMTASSVEWTVVGTEVEALQLEYNWIKEFDPRFNIRYR
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: DRLIREMEQQMTAAAEDLDFERAARLRDNIGAMRR
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: QENLGLQDAPLRIECIDISHVQGTDVVASLVVFEDGLPRKSDYRHFAIREAAGDGRSDDVASIAEVTRRRFHRHLRDMQEPGEMVAEGRSRRFAYPPNLFVVDGGAPQVNAAQAVLDDLGISDVAVIGLAKRLEEVWVPNLDGTAPDPIIFPRNSDGLYLLQRVRDEAHRFA
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: VVAFADDELEAAVQVFHVRGGRVRGQRGWVIEKSGEPGESTLEYLVEQFLTQFYGDQAELGGASDAGGDEASNPVPKQVLVPVLPETTDELETWLSQLRGSRVALRVPQRGDKRALAETVKRNAEGALNQHKLKRAGDFTARSAALQSIQENLGLQDAPLRIECIDISHVQGTDVVASLVVFEDGLPRKSDYRHFAIREAAGDGRSDDVASIAEVTRRRFHRHLRDMQEPGEMVAEGRSRRFAYPPNLFVVDGGAPQVNAAQAV
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: IPVEPGVYRFRDPHGRVIYVGKAKSLRSRLNSYFADISGLAPRTRQMVMTASSVEWTVVGTEVEALQLEYNWIKEFDPRFN
type: DOMAIN
name: GIY-YIG_UvrC_Cho
description: UvrC/Cho-like, GIY-YIG domain

phrase: PGVYRFRDPHGRVIYVGKAKSLRSRLNSYFADISGLAPRTRQMVMTASSVEWTVVGTEVEALQLEYNWIKEFD
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: SALDSVRGLGEHRRKALVT
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: EEITEVPGIGAATARAVLD
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1
Protein sequence:
MTESNLGAQSRTATIDNGAFGTRVITFSTGRLARQAAGSVVAQLGETVVLSATTVGRQPKEQFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSEDAILTCRLIDRPLRPSFVKGLRNEVQVVETVLALDPSHPYDVVAINAASMSTKLSGLPFSGPIGATRMAHIDGSWVAFPTHEELERATFDMVVAGRALPDGDVAIMMVEAEATEHTVKLVAGGASAPTEEVVASGLEAAKPAIRELCRAQSELAEVAAKPVAEFPVFLDYSDDAYQAVADLARSDVAEALKIAGKADREEALDRIKARVIEDLGPRFEGREKELSAALRSLTKSEVRSRVLREQVRIDGRGPRDIRPLTAEVGVLPRVHGSALFERGETQILGVTTLNMLRMEQSLDTLSPEKSKRYMHNYNFPPYSTGETGRVGSPKRREIGHGALAERALIPVLPSREEFPYAIRQVSEALGSNGSTSMGSVCASTLGLLSAGVPLKAPVAGIAMGLISDEVEGKTRYVTLTDILGAEDAFGDMDFKVAGTQEFVTALQLDTKLDGIPSDVLAAALQQAYEARQTILEVMQAAIEAPATMSDYAPRVTTVKIPVDKIGMVIGPKGQTINAIQDETGAEISIEDDGTIYVGATNGPSAQAAVERVNAIANPTLPKVGDRFLGTVVKTAAFGAFVSLLPGRDGLLHISKVGDGKRVEKVEDYLNVGDKVEVEIADIDQRGKIYLDKVRPEGAEGPAEAAATDRPAGRDRGDRAPRDRGDRGDRERGSRGPDRGDGGEGGGESRPRRRTRHS

Annotated regions:
phrase: KVGDRFLGTVVKTAAFGAFVSLLPGRDGLLHISKVGDGKRVEKVEDYLNVGDKVEVEIADIDQRGKIYLDK
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: GDRFLGTVVKTAAFGAFVSLLPGRDGLLHISKVGDGKRVEKVEDYLNVGDKVEVEIADIDQRGKIYLDK
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: TTVKIPVDKIGMVIGPKGQTINAIQDETGAEISIEDDGTIYVGATNGPSAQAAVER
type: DOMAIN
name: KH_dom_type_1
description: K Homology domain, type 1

phrase: PKVGDRFLGTVVKTAAFGAFVSLLPGRDGLLHISKVGDGKRVEKVEDYLNVGDKVEVEIADIDQRGK
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: IRPLTAEVGVLPRVHGSALFERGETQILGVTTLNMLRMEQSLDTLSPEKSKRYMHNYNFPPYSTGETGRVGSPKRREIGHGALAERALIPVLPSREEFPYAIRQVSEALGSNGSTSMGSVCASTLGLLSAGV
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1

phrase: RVITFSTGRLARQAAGSVVAQLGETVVLSATTVGRQPKEQFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSEDAILTCRLIDRPLRPSFVKGLRNEVQVVETVLALDPSHPYDVVAINAASMSTKLSGL
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1

phrase: QAVADLARSDVAEALKIAGKADREEALDRIKARVIEDLGPRFEGREKELSAALRSLTKSEVRSRVLREQVRIDG
type: DOMAIN
name: PNPase_PH_RNA-bd_bac/org-type
description: Polyribonucleotide nucleotidyltransferase, RNA-binding domain

phrase: APRVTTVKIPVDKIGMVIGPKGQTINAIQDETGAEISIEDDGTIYVGATNGPSAQAAVERVNAIA
type: DOMAIN
name: KH_dom
description: K Homology domain
Protein sequence:
MLEVVISDIQAREILDSRGYPTLYVKVITNTGTFGEACVPSGASTGIKEALELRDQDTSRYQGKGVLQALKNVKEVLLPVLQGVSIFDQILIDSIMVEADGTPNKEKLGANAILGVSLAAAKAAAATLGRSFYRYVGGCFAHILPCPMMNLINGGMHANNGLQFQEFMIRPIGAHSLQEAVRMGADVFHTLKNLLNDKHLATGVGDEGGFAPQLKSNSEALDLLVLAIEKAGFQPGEEISLALDCAASSFYDTKTETYAGKNSQEQVGILADLCDRYPIDSIEDGLAEEDFDGWELLTAELGENIQIVGDDLFVTNPELIAEGISKGLANAVLIKPNQIGTLTETSEAIQLAHSQGYTTILSHRSGETEDTTIADLAVAFNTGQIKTGSLSRSERIAKYNRLMAIEEELGSEGLFKDSNPFSGE

Annotated regions:
phrase: ISDIQAREILDSRGYPTLYVKVITNTGTFGEACVPSGASTGIKEALELRDQDTSRYQGKGVLQALKNVKEVLLPVLQGVSIFDQILIDSIMVEADGTPNKEKLGANAILGVSLAAAKAAAATLGRSFYRY
type: DOMAIN
name: Enolase_N
description: Enolase, N-terminal

phrase: VLIKPNQIGTLTE
type: CONSERVED_SITE
name: Enolase_CS
description: Enolase, conserved site

phrase: AHILPCPMMNLINGGMHANNGLQFQEFMIRPIGAHSLQEAVRMGADVFHTLKNLLNDKHLATGVGDEGGFAPQLKSNSEALDLLVLAIEKAGFQPGEEISLALDCAASSFYDTKTETYAGKNSQEQVGILADLCDRYPIDSIEDGLAEEDFDGWELLTAELGENIQIVGDDLFVTNPELIAEGISKGLANAVLIKPNQIGTLTETSEAIQLAHSQGYTTILSHRSGETEDTTIADLAVAFNTGQIKTGSLSRSERIAKYNRLMAIEEELGSEGLFKDSNPFS
type: DOMAIN
name: Enolase_C
description: Enolase, C-terminal TIM barrel domain

phrase: ISDIQAREILDSRGYPTLYVKVITNTGTFGEACVPSGASTGIKEALELRDQDTSRYQGKGVLQALKNVKEVLLPVLQGVSIFDQILIDSIMVEADGTPNKEKLGANAILGVSLAAAKAAAATLGRSFYRY
type: DOMAIN
name: Enolase_N
description: Enolase, N-terminal

phrase: HILPCPMMNLINGGMHANNGLQFQEFMIRPIGAHSLQEAVRMGADVFHTLKNLLNDKHLATGVGDEGGFAPQLKSNSEALDLLVLAIEKAGFQPGEEISLALDCAASSFYDTKTETYAGKNSQEQVGILADLCDRYPIDSIEDGLAEEDFDGWELLTAELGENIQIVGDDLFVTNPELIAEGISKGLANAVLIKPNQIGTLTETSEAIQLAHSQGYTTILSHRSGETEDTTIADLAVAFNTGQIKTGSLSRSERIAKYNRLMAIEEELGSEGLFK
type: DOMAIN
name: Enolase_C
description: Enolase, C-terminal TIM barrel domain
Protein sequence:
MALRLLRLVPASASARGLAAGAQRVGRIHTSVHCKLRYGLLASILGDKTTKKLHEYSRVITVDGNICSGKNKLARDIAEQLGMKHYPEAGIQYSSSTTGDGRPLDIEFSGSCSLEKFYDNPKSNDGNSYRLQSWLYASRLLQYSDALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGFIRKQCVDHYNEIKRLTLPEYLPPHAVIYIDVPVSEIQSRIQKKGDPHEMKVTSAYLQDIEDAYKKTFLPKMSEICEVLVYSSWEAEDSTKVVEDIEYLNYNKGPWLKQDDRTFHNLRMLVQDKREVLNYTTVPVYLPEITIGAHQGSRIYDSFRELPGRKYAPGYNADVGDKWIWLK

Annotated regions:
phrase: ITVDGNICSGKNKLARDIAEQLGMKHYPEAGIQYSSSTTGDGRPLDIEFSGSCSLEKFYDNPKSNDGNSYRLQSWLYASRLLQYSDALEHLLSTGQGVVLERSIYSDFVFLEAMYNQGFIRKQCVDHYNEIKRLTLPEYLPPHAVIYIDVPVSEIQSRIQKKGDPHEMKVTSAYLQDIEDAYKKTFLPKMSEICEVLVY
type: DOMAIN
name: DNK_dom
description: Deoxynucleoside kinase domain
Protein sequence:
MLEGCILPDFGQSKTDVSPSQSRPQSSPNNSVPGAPNRISFAKLREPLEVPGLLDVQTDSFEWLIGSPCWRAAAASRGDLKPVGGLEEVLYELSPIEDFSGSMSLSFSDPRFDEVKAPVEECKDKDMTYAAPLFVTAEFINNNTGEIKSQTVFMGDFPMMTEKGTFIINGTERVVVSQLVRSPGVYFDETIDKSTEKTLHSVKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTSEQITERFGFSEIMRSTLEKDNTVGTDEALLDIYRKLRPGEPPTKESAQTLLENLFFKEKRYDLARVGRYKVNKKLGLHAGELITSSTLTEEDVVATIEYLVRLHEGQSTMTVPGGVEVPVETDDIDHFGNRRLRTVGELIQNQIRVGMSRMERVVRERMTTQDVEAITPQTLINIRPVVAAIKEFFGTSQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGLEVRDVHPSHYGRMCPIETPEGPNIGLIGSLSVYARVNPFGFIETPYRKVVDGVVSDEIEYLTADEEDRHVVAQANSPIDEAGRFLEPRVLVRRKAGEVEYVASSEVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMQRQAVPLVRSEAPLVGTGMELRAAIDAGHVVVAEKSGVIEEVSADYITVMADDGTRRTYRMRKFARSNHGTCANQSPIVDAGDRVEAGQVIADGPCTENGEMALGKNLLVAIMPWEGHNYEDAIILSNRLVEEDVLTSIHIEEHEIDARDTKLGAEEITRDIPNVSDEVLADLDERGIVRIGAEVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGKVIGIRVFSHEDDDELPAGVNELVRVYVAQKRKISDGDKLAGRHGNKGVIGKILPAEDMPFLPDGTPVDIILNTHGVPRRMNVGQILETHLGWVAKSGWKIDVAGGIPDWAVNLPEELLHAAPNQIVSTPVFDGAKEEELQGLLSSTLPNRDGDVMVGGDGKAVLFDGRSGEPFPYPVTVGYMYIMKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYTLQELLTIKSDDTVGRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSSDGAAIELREGEDEDLERAAANLGINLSRNESASIEDLA

Annotated regions:
phrase: GDKLAGRHGNKG
type: CONSERVED_SITE
name: RNA_pol_bsu_CS
description: RNA polymerase, beta subunit, conserved site

phrase: DPRFDEVKAPVEECKDKDMTYAAPLFVTAEFINNNTGEIKSQTVFMGDFPMMTEKGTFIINGTERVVVSQLVRSPGVYFDETIDKSTEKTLHSVKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTSEQITERFGFSEIMRSTLEKDNTVGTDEALLDIYRKLRPGEPPTKESAQTLLENLFFKEKRYDLARVGRYKVNKKLGLHAGELITSSTLTEEDVVATIEYLVRLHEGQSTMTVPGGVEVPVETDDIDHFGNRRLRTVGELIQNQIRVGMSRMERVVRERMTTQDVEAITPQTLINIRP
type: DOMAIN
name: RNA_pol_bsu_protrusion
description: RNA polymerase, beta subunit, protrusion

phrase: RSPGVYFDETIDKSTEKTLHSVKVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTSEQITERFGFSEIMRSTLEKDNTVGTDEALLDIYRKLRPGEPPTKESAQTLLENLFFKEKRYDLARVGRYKVNKKLGLHAGELITSSTLTEEDVVATIEYLVRLHEGQSTMTVPGGVEVPVETDDIDHFGNRRL
type: DOMAIN
name: RNA_pol_Rpb2_2
description: RNA polymerase Rpb2, domain 2

phrase: YRKVVDGVVSDEIEYLTADEEDRHVVAQANSPIDEAGRFLEPRVLVRRKAGEVEYVASSEVDYMDV
type: DOMAIN
name: DNA-dir_RNA_pol_bsu_external_1
description: DNA-directed RNA polymerase, beta subunit, external 1 domain

phrase: VAEKSGVIEEVSADYITVMADDGTRRTYRMRKFARSNHGTCANQSPIVDAGDRVEAGQVIADGPCTENGEMALGKNLLVAIMPWEGHNYEDAIILSNRLVEEDVLTSIHIEEHEIDARDTKLGAEEITRDIPNVSDEVLADLDERGIVRIGAEVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGKVIGIRVFSHEDDDELPAGVNELVRVYVAQKRKISDGDKLAGRHGNKGVIGKILPAEDMPFLPDGTPVDIILNTHGVPRRMNVGQILETHLGWVAKSGWKIDVAGGIPDWAVNLPEELLHAAPNQIVSTPVFDGAKEEELQGLLSSTLPNRDGDVMVGGDGKAVLFDGRSGEPFPYPVTVGYMYIMKLHHLVDDKIHARSTGPYSMITQQPLGGKA
type: DOMAIN
name: DNA-dir_RNAP_su2_dom
description: DNA-directed RNA polymerase, subunit 2, hybrid-binding domain

phrase: QFMDQNNPLSGLTHKRRLSALGPGGLSRERAGLEVRDVHPSHYGRMCPIETPEGPNIGLIGSLSVYAR
type: DOMAIN
name: RNA_pol_Rpb2_3
description: RNA polymerase Rpb2, domain 3

phrase: GGQRFGEMECWAMQAYGAAYTLQELLTIKSDDTVGRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEV
type: DOMAIN
name: RNA_pol_Rpb2_7
description: RNA polymerase Rpb2, domain 7
Protein sequence:
MKLSTLLNSVDGAIGCMANPEISGVFTRAQSVTPGSLFIAVNGFSADGHDFIPEAVRNGAVAVVAEWPVDAGVPVAVVPNTRQAVGPIAAAFYGNPADDLCLIGITGTNGKTTTSYLVESMLTLAGHCVGVMGTVNVRYQDQVVPAPMTTPDALELQQTLHAMRLAGVTHVVMEVSSHAIDLHRLAGCGFDIRAFTNLSQDHLDYHGDMAAYRICKERFFSAVFESSNVTVKPGLVFNTADPVGKTLADTYAGTCLRVGPDEADGLHAATVSFNLDGVRGELVFGGNRIGFSSALAGRFNLENILVAAGIAQTAGLSLGEIAAGITAFSAVPGRLERIADRCGRYVFVDYAHTPDALEKVLLGIKQVKDGRLISVFGCGGDRDRSKRPQMGRIGTMLSDVAIVTSDNPRTEDPLAIISDIRSGIDTVVCRELTVDPDVCGPSDTEGGGFLVEPDRRRAIRLGMKLARPGDAVLIAGKGHETYQIIGKTKHPFDDRDEARKALAE

Annotated regions:
phrase: IGITGTNGKTTTSYLVESMLTLA
type: CONSERVED_SITE
name: Folylpolyglutamate_synth_CS
description: Folylpolyglutamate synthetase, conserved site

phrase: GRLERIADRCGRYVFVDYAHTPDALEKVLLGIKQVKDGRLISVFGCGGDRDRSKRPQMGRIGTMLSDVAIVTSDNPRTEDPLAIISDIRSGIDTVVCRELTVDPDVCGPSDTEGGGFLVEPDRRRAIRLGMKLARPGDAVLIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: ITGTNGKTTTSYLVESMLTLAGHCVGVMGTVNVRYQDQVVPAPMTTPDALELQQTLHAMRLAGVTHVVMEVSSHAIDLHRLAGCGFDIRAFTNLSQDHLDYHGDMAAYRICKERFFSAVFESSNVTVKPGLVFNTADPVGKTLADTYAGTCLRVGPDEADGLHAATVSFNLDGVRGELVFGGNRIGFSSALAGRFNLENILVAAG
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: EISGVFTRAQSVTPGSLFIAVNGFSADGHDFIPEAVRNGAVAVVAEWPVDAGVPVAVVPNTRQAVGPIAAAF
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain
Protein sequence:
MASKPGSGQPGPPSPSPPRAPTKPGGPTAASQLRSPRFWITLLIIFAVNIFVANVLFAPQQPKSVTIPYNVFKEQVAAGNVVSITSTGTVITGTTRKAIGATPKASDTADHFSTVLPAFADPGLESLLEQHEVTINVNDPNQQTPFWETLLINLGPTLLIVVVILFVMRRMAAASGGGGFLGQFGQSKARLYDAERPGTTFADVAGIEEVKTELVEVVAFLREPLKYQRLGGTVPKGVLLIGPPGTGKTLVARAVAGEASVPFFSMSASEFVEAIVGVGASRVRDLFKKARDAAPAIIFIDELDAIGRSRQGTIRLGGNDEQEQTLNQILTEMDGFDSREGVIVLAATNRADVLDAALLRPGRFDRRVTVMPPDRRGRAAILKIHTRKVPLGPDVDLDALASDTPGLVGADLRNIVNEAALAAAARGAPAVGQVDFSNAIEKTLLGSERNIMLSADDRERIAYHESGHALLGLLVPGADPVRKVTIVPRGMALGVTVQSPVDDRFNYGETYLRARIIGALGGRAAESLVFGEVTSGAESDLHQVTQIAHEMVVRWGMSDKIGPLSFSENGQPGPFAMSKPYSEGTALLIDSEVKRIAQECMEQACQLLTEHRAQLDKLAQTLLREDSLNEREILDVTGIPSRNPRDAGDRD

Annotated regions:
phrase: DVDLDALASDTPGLVGADLRNIVNEAALAAAARGAPAVGQVDF
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: VLLIGPPGTGKTLVARAVAGEASVPFFSMSASEFVEAIVGVGASRVRDLFKKARDAAPAIIFIDELDAIGRSRQGTIRLGGNDEQEQTLNQILTEMDGFDSREGVIVLAATNRADVLDAALLRPGRFDRRVT
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: VPKGVLLIGPPGTGKTLVARAVAGEASVPFFSMSASEFVEAIVGVGASRVRDLFKKARDAAPAIIFIDELDAIGRSRQGTIRLGGNDEQEQTLNQILTEMDGFDSREGVIVLAATNRADVLDAALLRPGRFDRRVTVMPPD
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VIVLAATNRADVLDAALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: MLSADDRERIAYHESGHALLGLLVPGADPVRKVTIVPRGMALGVTVQSPVDDRFNYGETYLRARIIGALGGRAAESLVFGEVTSGAESDLHQVTQIAHEMVVRWGMSDKIGPLSFSENGQPGPFAMSKPYSEGTALLIDSEVKRIAQECMEQACQLLTEHRAQLDKLAQTLLREDSLNEREI
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: WITLLIIFAVNIFVANVLFAPQQPKSVTIPYNVFKEQVAAGNVVSITSTGTVITGTTRKAIGATPKASDTADHFSTVLPAFADPGLESLLEQHEVTINVND
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular
Protein sequence:
MAKKVIANIKLQIKAGKATPSPPIGPALGQHGVNIMEFCKAYNALTQSQEGMVIPVVITVYADRSFSFVTKTPPAAVLLKQAAKIAKGAGDPKRDKVGTVSAAQVREIADLKYKDLNAVNIEGAIKIIEGTARSMGIEISG

Annotated regions:
phrase: IKLQIKAGKATPSPPIGPALGQHGVNIMEFCKAYNALTQSQEGMVIPVVITVYADRS
type: DOMAIN
name: Ribosomal_uL11_N
description: Large ribosomal subunit protein uL11, N-terminal

phrase: KTPPAAVLLKQAAKIAKGAGDPKRDKVGTVSAAQVREIADLKYKDLNAVNIEGAIKIIEGTARSMGIE
type: DOMAIN
name: Ribosomal_uL11_C
description: Large ribosomal subunit protein uL11, C-terminal

phrase: KIIEGTARSMGIEIS
type: CONSERVED_SITE
name: Ribosomal_uL11_CS
description: Large ribosomal subunit protein uL11, conserved site
Protein sequence:
MRPVSKYGQNFLIDLNLVELIARSAEIGPSDIVLEIGTGVGSLTSIMASQAGAILTVEIDQNLFQLASEELAPFPHVKMIQGDALKNKSTFRDDIMESIREAKSRLPDDSKFMLVANLPYNVATPIVSNLLHQDPPPDRIVVTIQKELGERMVAGPGSKDYGALSIWIQATCRAEIVRILPPTVFWPRPKVDSAIVRLDVDHERGNAIPDLKYFHQTVRALFFHRRKFLRSVVISAMKGRLDKPAIDEILGRLGHGETARAEELNLEQISDLVEALRQAELANE

Annotated regions:
phrase: LVELIARSAEIGPSDIVLEIGTGVGSLTSIMASQAGAILTVEIDQNLFQLASEELAPFPHVKMIQGDALKNKSTFRDDIMESIREAKSRLPDDSKFMLVANLPYNVATPIVSNLLHQDPPPDRIVVTIQKELGERMVAGPGSKDYGALSIWIQATCRAEIVRILPPTVFWPRPKVDSAIVRLDVD
type: DOMAIN
name: rRNA_Ade_methylase_Trfase_N
description: Ribosomal RNA adenine methylase transferase, N-terminal

phrase: VLEIGTGVGSLTSIMASQAGAILTVEI
type: CONSERVED_SITE
name: rRNA_Ade_Mease_Trfase_CS
description: Ribosomal RNA adenine methylase transferase, conserved site
Protein sequence:
MNDNAFTFQTLHPETIMDALFEQGIRVDSGLTPLNSYENRVYQFQDEDRRRFVVKFYRPERWSVDQIREEHQFALELVKDEVPVAAPLAFNGQTLLAHQGYHYAIFPSVGGRQFEADNIDQMEAVGRYLGRLHQTGRKRPFTFRPDIGLAEYLFEPRQVFEDAALIPSGQKAAFLKATDTLLSAVTECWRTDFATLRLHGDCHAGNILWRDGPLFVDLDDARNGPAIQDLWMLLNGDKAEQRMQLETIIEAYEEISEFDTAEIGLIEPLRAMRLVYYLAWLIRRWGDPAFPKNFPWLTGEDYWQRQTTTFIEQTKILHEPPLQLTPMY

Annotated regions:
phrase: LTPLNSYENRVYQFQDEDRRRFVVKFYRPERWSVDQIREEHQFALELVKDEVPVAAPLAFNGQTLLAHQGYHYAIFPSVGGRQFEADNIDQMEAVGRYLGRLHQTGRKRPFTFRPDIGLAEYLFEPRQVFEDAALIPSGQKAAFLKATDTLLSAVTECWRTDFATLRLHGDCHAGNILWRDGPLFVDLDDARNGPAIQDLWMLLNGDKAEQRMQLETIIEAYEEISEF
type: DOMAIN
name: Aminoglycoside_PTrfase
description: Aminoglycoside phosphotransferase
Protein sequence:
MDLVSFFNPYLENVRTKKKTKSTFLRIFPRGIMHDGAPGLMKTLCDSEPRMFYQDKQYILKNDMTWPSLSQVAEKELRAPLKFHIYDASESLLFTDSIENIPFQYRHFVIPSGNVIKLFGKTECGKKVCINVFGQNSYFYCEYQCKKELNSRICSLLNSSEIKMSCSFSIESVTKYNFYGYNTEPIKNLFKLSFSNFYISNRIGKILLNEGVSVYEAEVEILNRFFIDNNLKSFGWYQINYLSIQEFAKSSNVEIELNCHVSDLFLLKEDSWPLYDCCSFDIECLSQNGNFPDAEQMVTSSLISVIDFDSEGNYQSKHLFTLGTCEQIEGVFIYEFASEFELLYAFFLFLKCKSPEILTGYNIINFDLKYLCTRMEKIYNFEIGGFSKLKRGKFSVIVPYEQHKKFLNSLTKVNMSGILCFDMYNVYSSKISAQNYKLDTIAKLCLNQEKENLSYKEIPKKFIDGSKGRAVVGRYCIQDSLLVVQLFTKINYHYEMAEVASLAYITIRCAVFEGQQKKIFPCILHEAKNLNMILPSMNTNFNKGKENVGYKGATVLEPKIGYYATPTVVFDFQSLYPSIMMAHNLCYSTLVVDENAVIGLHADDILTVHVGPVTHRFVKKTVRESILASLLKKWLDKRKEVKMQMKMCNNPVMEMLLDKKQLALKTTCNSVYGVTGATHSLLPCVAIAASVTCLGREMLCKTVDYVDSAMYSDTFFIEKFGLTRGDFSGTFGIEVIYGDTDSLFVTFKNVCPKALKRIAPSIASHITNTLFKHPIKLEFEKILFPLILICKKRYIGKLDDATLVFKGVELVRKTSCDFVKVVVKDIIDLLFWDVDVQKSAEKLSNMTIQEIYENGVPDGIQKIIKKLCDARDALFLNRVNIKSLVLSSVLSKDISAYKQANLPHLAVVKRLAQRKEELPNIGDRVMYILIAPTETVKKTFHNYELAEDPAYAIENNLKINADKYFEQIMKAVTNAISPIFPKTGIKKEKFLLSILPLKVYVDQSFCDLTDVL

Annotated regions:
phrase: YGDTDSLF
type: CONSERVED_SITE
name: DNA-dir_DNA_pol_B_CS
description: DNA-directed DNA polymerase, family B, conserved site

phrase: ITIRCAVFEGQQKKIFPCILHEAKNLNMILPSMNTNFNKGKENVGYKGATVLEPKIGYYATPTVVFDFQSLYPSIMMAHNLCYSTLVVDENAVIGLHADDILTVHVGPVTHRFVKKTVRESILASLLKKWLDKRKEVKMQMKMCNNPVMEMLLDKKQLALKTTCNSVYGVTGATHSLLPCVAIAASVTCLGREMLCKTVDYVDSAMYSDTFFIEKFGLTRGDFSGTFGIEVIYGDTDSLFVTFKNVCPKALKRIAPSIASHITNTLFKHPIKLEFEKILFPLILICKKRYIGKLDDATLVFKGVELVRKTSCDFVKVVVKDIIDLLFWDVDVQKSAEKLSNMTIQEIYENGVPDGIQKIIKKLCDARDALFLNRVNIKSLVLSSVLSKDISAYKQANLPHLAVVKRLAQRKEELPNIGDRVMYILIAPTETVKKTFHNYELAEDPAYAIENNLKINADKYFEQIMKAVTNAISP
type: DOMAIN
name: DNA-dir_DNA_pol_B_multi_dom
description: DNA-directed DNA polymerase, family B, multifunctional domain

phrase: SVYEAEVEILNRFFIDNNLKSFGWYQINYLSIQEFAKSSNVEIELNCHVSDLFLLKEDSWPLYDCCSFDIECLSQNGNFPDAEQMVTSSLISVIDFDSEGNYQSKHLFTLGTCEQIEGVFIYEFASEFELLYAFFLFLKCKSPEILTGYNIINFDLKYLCTRMEKIYNFEIGGFSKLKRGKFSVIVPYEQHKKFLNSLTKVNMSGILCFDMYNVYSSKISAQNYKLDT
type: DOMAIN
name: DNA-dir_DNA_pol_B_exonuc
description: DNA-directed DNA polymerase, family B, exonuclease domain
Protein sequence:
MRVRGIWRNYPQWWIWSILVCWVLMICNGGNDLWVTVYYGVPVWKEAKTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEMVLVNVTENFNMWKNDMVDQMQEDIISLWDQSLKPCVKLTPLCVTLECTTNSTNDNANNSKTDNGSGQEIKNCTFNTTTELRDRKKKEYALFYRLDIVPTFNEEHLIDSDSTGYYRLINCNTSAITQACPKVNFDPIPIHYCAPAGYAILKCNNKTFNGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEEGIIIRSENITNNIKTIIVHLNDSVEINCTRPNNNTRKSIRIGPGQTFYATGDIIGNIRQAHCNISENKWNKTLEGVREKLAIHFPNKTIKFAASSGGDLEIVTHSFNCRGEFFYCNTSGLFNVTYMPNGTESNSNSQLNNITNIPSITIQKKKMWQKVGQAMYAPPIAGNITCKSNITGIILVRDGREDKVNIETNKTETFRPGGGDMRDNWRSELYKYKVVEIKPLGIAPTEAKRRVVEREKRAVGIGAVFLGFLGAAGSTMGAASLTLTVQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQTRVLAIERYLKDQQLLGIWGCSGKLICTTAVRWNSSWSNKTQKDIWENMTWMQWDREINNYTSIIYGLLEESQIQQEKNEKDLLALDSWKNLWSWFSITNWLWYIKIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQTLTQSPRGPDRPRGIEEEGGEQDRDRSVRLVSGFLALAWDDLR

Annotated regions:
phrase: LWVTVYYGVPVWKEAKTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEMVLVNVTENFNMWKNDMVDQMQEDIISLWDQSLKPCVKLTPLCVTLECTTNSTNDNANNSKTDNGSGQEIKNCTFNTTTELRDRKKKEYALFYRLDIVPTFNEEHLIDSDSTGYYRLINCNTSAITQACPKVNFDPIPIHYCAPAGYAILKCNNKTFNGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEEGIIIRSENITNNIKTIIVHLNDSVEINCTRPNNNTRKSIRIGPGQTFYATGDIIGNIRQAHCNISENKWNKTLEGVREKLAIHFPNKTIKFAASSGGDLEIVTHSFNCRGEFFYCNTSGLFNVTYMPNGTESNSNSQLNNITNIPSITIQKKKMWQKVGQAMYAPPIAGNITCKSNITGIILVRDGREDKVNIETNKTETFRPGGGDMRDNWRSELYKYKVVEIKPLGIAPTEAKRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: VQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQTRVLAIERYLKDQQLLGIWGCSGKLICTTAVRWNSSWSNKTQKDIWENMTWMQWDREINNYTSIIYGLLEESQIQQEKNEKDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASLTLTVQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQTRVLAIERYLKDQQLLGIWGCSGKLICTTAVRWNSSWSNKTQKDIWENMTWMQWDREINNYTSIIYGLLEESQIQQEKNEKDLLALDSWKNLWSWFSITNWLWYIKIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQTLT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MDPGTEEYELNGDLRPGSPGSPDASPPRWGLRNRPINVNHYANKKSAAESMLDIALLMANASQLKAVVEQGNEFAFFVPLVVLISISLVLQIGVGVLLIFLVKYDLNNPAKHAKLDFLNNLATGLVFIIVVVNIFITAFGVQKPVMDVAPRQ

Annotated regions:
Protein sequence:
MKAFIHTDWWDVLKPEFEKPYYHQLHEFLKNEYRTKNIHPDMYNIFQAFEWTPFADTKVVILGQDPYHGPGQAHGLSFSVLPGVAVPPSLVNIYKELQDDVGCTPVNHGYLESWAKQGVLLLNSVLTVQNGVAFSHAGKGWERLTDVAIQRLSERSTPVVFILWGKAARSKIKLIDTQTNVVLQAPHPSPLSAYRGFFGSKPFSKTNIALTSFGEQPINWQLPEHVNLEH

Annotated regions:
phrase: EWTPFADTKVVILGQDPYHGPGQAHGLSFSVLPGVAVPPSLVNIYKELQDDVGCTPVNHGYLESWAKQGVLLLNSVLTVQNGVAFSHAGKGWERLTDVAIQRLSERSTPVVFILWGKAARSKIKLIDTQTNVVLQAPHPSPLSAYRGFFGSKPFSKTNIA
type: DOMAIN
name: Uracil-DNA_glycosylase-like
description: Uracil-DNA glycosylase-like

phrase: FADTKVVILGQDPYHGPGQAHGLSFSVLPGVAVPPSLVNIYKELQDDVGCTPVNHGYLESWAKQGVLLLNSVLTVQNGVAFSHAGKGWERLTDVAIQRLSERSTPVVFILWGKAARSKIKLIDTQTNVVLQAPHPSPLSAYRGFFGSKPFSKTNIA
type: DOMAIN
name: Uracil-DNA_glycosylase-like
description: Uracil-DNA glycosylase-like

phrase: KVVILGQDP
type: ACTIVE_SITE
name: Ura-DNA_Glyclase_AS
description: Uracil-DNA glycosylase, active site
Protein sequence:
MSGGVSLWIERWMLSTNAKDIGNLYLIFALFSGLLGTAFSVLIRMELSGPSVQYIADNQLYNSIITAHALLMIFFMVMPALIGGFGNFLLPLLVGGPDMAFPRLNNISFWLLPPSLILLVFSACIEGGAGTGWTIYPPLSGVQSHSGPSVDLAIFALHLSGVSSLLGAMNFITTIMNMRTPSIRLHKLALFGWAVIITAVLLLLSLPVLAGAITMLLTDRNFNTSFFETAGGGDPILFQHLFWFFGHPEVYILIIPAFGIISTTISAYSNKSVFGYIGMVYAMMSIGILGFIVWSHHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSIRLTPSMLFALGFVFMFTIGGLSGVVLANASLDIAFHDTYYVVAHFHYVLSMGAVFAMFSGWYFWIPKMLGLNYNMTLSKVQFWILFIGVNVTFFPQHFLGLQGMPRRISDYPDAFAGWNLISSFGSIISVVAAWLFLYIVYLQLVEGEYAGRFPWLNPQFYTDTLQALLNRSYPSLEWALSSPPKPHAFVSLPLQSNILRSLF

Annotated regions:
phrase: WFFGHPEVYILIIPAFGIISTTISAYSNKSVFGYIGMVYAMMSIGILGFIVWSH
type: BINDING_SITE
name: Cyt_c_Oxase_su1_BS
description: Cytochrome c oxidase, subunit I, copper-binding site

phrase: SLWIERWMLSTNAKDIGNLYLIFALFSGLLGTAFSVLIRMELSGPSVQYIADNQLYNSIITAHALLMIFFMVMPALIGGFGNFLLPLLVGGPDMAFPRLNNISFWLLPPSLILLVFSACIEGGAGTGWTIYPPLSGVQSHSGPSVDLAIFALHLSGVSSLLGAMNFITTIMNMRTPSIRLHKLALFGWAVIITAVLLLLSLPVLAGAITMLLTDRNFNTSFFETAGGGDPILFQHLFWFFGHPEVYILIIPAFGIISTTISAYSNKSVFGYIGMVYAMMSIGILGFIVWSHHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSIRLTPSMLFALGFVFMFTIGGLSGVVLANASLDIAFHDTYYVVAHFHYVLSMGAVFAMFSGWYFWIPKMLGLNYNMTLSKVQFWILFIGVNVTFFPQHFLGLQGMPRRISDYPDAFAGWNLISSFGSIISVVAAWLFLYIVYLQLVEGEYAGRFPWLNPQFYTDTLQALLNRSYPSLEWALSSPPKPHAFVSLPLQ
type: DOMAIN
name: Cyt_c_oxase-like_su1_dom
description: Cytochrome c oxidase-like, subunit I domain

phrase: TNAKDIGNLYLIFALFSGLLGTAFSVLIRMELSGPSVQYIADNQLYNSIITAHALLMIFFMVMPALIGGFGNFLLPLLVGGPDMAFPRLNNISFWLLPPSLILLVFSACIEGGAGTGWTIYPPLSGVQSHSGPSVDLAIFALHLSGVSSLLGAMNFITTIMNMRTPSIRLHKLALFGWAVIITAVLLLLSLPVLAGAITMLLTDRNFNTSFFETAGGGDPILFQHLFWFFGHPEVYILIIPAFGIISTTISAYSNKSVFGYIGMVYAMMSIGILGFIVWSHHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSIRLTPSMLFALGFVFMFTIGGLSGVVLANASLDIAFHDTYYVVAHFHYVLSMGAVFAMFSGWYFWIPKMLGLNYNMTLSKVQFWILFIGVNVTFFPQHFLGLQGMPRRISDYPDAFAGWNLISSFGSIISVVAAWLFLYIVYLQLVEGEYAGRFPWLNPQFYTDTLQALLNRSYPSLEWA
type: DOMAIN
name: Cyt_c_oxase_su1_dom
description: Cytochrome c oxidase subunit I domain
Protein sequence:
MRLTEILNTAEVVFTPDQEQAGIGDTAISDITCDSRQVGQGALFIAVDGYTADGHDYIHQALDNGAAAVLAQKIPRDLPRKQALQVVLSKNTRKDTAIAAANFFGHPSKDLVLVGITGTNGKTSITWLLEQIYQTCGITCGVIGTINIRYPGTTLDNPVTTPDAVCLHKTMHDMKLAGATHVIMEVSSHSLDQHRVDGCDFNAAVFTNLTQDHLDYHNGLDDYFACKRTLFTRHLGPFGDGTRGKAVINIDNQYGIRLADSLDQPVIRVSATCDADIRAIDITDDIHGLKGTLDVSGVQAPIHSKLTGRFNLENILCAAGAAFATGICPESIARGIAGLERIPGRLEKLPTELNRHIFVDYAHTPDALESILKTLAGRAPARLITVFGCGGDRDRTKRGPMGVIACRYADIAVVTSDNPRTEDPDAIIDEIIAGIRARGGKQIDPYKSNACEKGYIRMTDRAKALALAVQMSKPGDIIVAAGKGHETYQITNTGTILFDDKEHLTRACNSALTPRPWGVTDLSSALGCHAVTVLGQKSVTDAKRSVFKGISTDSRTMAPDMVFLALAGDRFDGHGFIPGLAEKGVSAFVVSQGYLDTLDLNQKRRMDKGRICFFEVPDTRVALGHLARYHRMRSNARIAALTGSNGKTSIRKMAQNIFCRHHDTLATRGNLNNEIGLPLTLLRLADIHEWAVVEMGMSHPGEIARLTAIARPDIAMVTNTHGSHMEGVGSLENVARAKAEIFKGLTPGGTAIIFADDPRRDILIQGAK

Annotated regions:
phrase: GRLEKLPTELNRHIFVDYAHTPDALESILKTLAGRAPARLITVFGCGGDRDRTKRGPMGVIACRYADIAVVTSDNPRTEDPDAIIDEIIAGIRARGGKQIDPYKSNACEKGYIRMTDRAKALALAVQMSKPGDIIVAAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: TGSNGKTSIRKMAQNIFCRHHDTLATRGNLNNEIGLPLTLLRLADIHEWAVVEMGMSHPGEIARLTAIARPDIAMVTNTHGSHMEGVGSLENVARAKAEIFKGLTPGGTAIIFADDPRRDILI
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: ITGTNGKTSITWLLEQIYQTCGITCGVIGTINIRYPGTTLDNPVTTPDAVCLHKTMHDMKLAGATHVIMEVSSHSLDQHRVDGCDFNAAVFTNLTQDHLDYHNGLDDYFACKRTLFTRHLGPFGDGTRGKAVINIDNQYGIRLADSLDQPVIRVSATCDADIRAIDITDDIHGLKGTLDVSGVQAPIHSKLTGRFNLENILCAAGA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: KGISTDSRTMAPDMVFLALAGDRFDGHGFIPGLAEKGVSAFVVSQGYLDTLDLNQKRRMDKGRICFFEVPDTRVALGHLA
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: ISDITCDSRQVGQGALFIAVDGYTADGHDYIHQALDNGAAAVLAQK
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain