nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MFIDLTPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPKEFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAGEAHFAIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHKGISILIVDTKDPGYSWTPIILADGAHHTNATYYNDVRVPVDMLVGKENDGWRLITTQLNNERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVASAGEDINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRNLVITFGGGVNEVMREMIAASGLKVPRVPR

Annotated regions:
phrase: TPEQRQLQAEIRQYFSNLISPDERTEMEKDRHGPAYRAVIRRMGRDGRLGVGWPKEFGGLGFGPIEQQIFVNEAHRADVPLPAVTLQTVGPTLQAHGSELQKKKFLPAILAG
type: DOMAIN
name: AcylCoA_DH/ox_N
description: Acyl-CoA dehydrogenase/oxidase, N-terminal

phrase: AIGYTEPEAGTDLASLRTTAVRDGDHYIVNGQKVFTTGAHDADYIWLACRTDPNAAKHKGISILIVDTKDPGYSWTPIILADGAH
type: DOMAIN
name: Acyl-CoA_Oxase/DH_mid-dom
description: Acyl-CoA oxidase/dehydrogenase, middle domain

phrase: NDGWRLITTQLNNERVMLGPAGRFASIYDRVHAWASVPGGNGVTPIDHDDVKRALGEIRAIWRINELLNWQVASAGEDINMADAAATKVFGTERVQRAGRLAEEIVGKYGNPAEPDTAELLRWLDAQTKRNLVITFGGGVNEVMREMIAA
type: DOMAIN
name: AcylCo_DH/oxidase_C
description: Acyl-CoA dehydrogenase/oxidase, C-terminal
Protein sequence:
MAARWAQFLLFSLLSLPQVYCEYGMVHVLSEKGSSKGKDYCILFNSQWAHLPHDLGKASLLQLQDQTASVLCSPSDVPDGGFNNRIPMVMRGNCTFYEKVRLAQINGARGLLIVSRERLVPPGGNRSQYEEIDIPVALLSYSDMLDIVKSFGRSVKGAMYAPNEPVLDYNMVIIFVMAVGTVAIGGYWAGSRDVKERYMKHKRDDGAEKHEDETVDVTPIMICVFVVMCCSMLVLLYFFYDHLVYVIIGIFCLAASIGLYSCLSPFVRRFPLGKCRIPDNNLPYFHKRPQVRILLLAVFCISVSVVWGVFRNEDQWAWVLQDALGIAFCLYMLKTIRLPTFKGCTLLLLVLFVYDVFFVFITPFLTKTGESIMVEVAAGPSDSATHEKLPMVLKVPRLNSSPLALCDRPFSLLGFGDILVPGLLVAYCHRFDIQVQSSRVYFVACTIAYGIGLLVTFVALALMQMGQPALLYLVPCTLITSFSVALWRKELAMFWTGSGFAKDLPQPPLVIASVNCPQLPKDSNVPASQQETEEMANPTLHVKELHSPTLAAEEPADNDTKTEQSEVSIAQSEEAAGHNKDDLESKSLNLEQKQLE

Annotated regions:
phrase: CSPSDVPDGGFNNRIPMVMRGNCTFYEKVRLAQINGARGLLIVSRERLVPPGGNRSQYEEIDIPVALLSYSDML
type: DOMAIN
name: PA_domain
description: PA domain
Protein sequence:
MNRIFRYFLLYGLIFLAIMGIFSSLNNTNPKMEPIRYDEFITALEGGKVKNATFQPVNLVFEVRGTMEGAEKGETFITNVPMNDETLMNDIRSIAKTTNTEIDILPAPETSAWVSFFTGLVPFIIIFILFFFLLNQAQGGGGGRVMNFGKSKAKLHTDDKKKVRFNDVAGADEEKAELVEVVDFLKDSRKFAEVGARIPKGILLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGENEGIIIVAATNRPDILDPALLRPGRFDRQITVGRPDVKGREAVLKVHARNKPLDESVNLKALAQRTPGFSGADLENLLNEAALVAARRSKAKIDMADIDEATDRVIAGPAKTSRVISDKERNIVANHEAGHVVVGLMLDDAEIVHKVTIVPRGQAGGYAVMLPKEDRYFMTKPELLDKIAGLLGGRVAEEIVLGEVSTGAHNDFQRATGIARSMVTEYGMSEKLGPMQFGQSQGQVFLGRDFNSEQNYSESIAYEIDLEIQRIIKEQYERTKKILTEKRDLLDLIASTLLKVETLDAEQINHLKDHGKLPDRPYERNGKEESDIPDTTGAPADPSVADLPKETKTDTPPKSLDEHRNE

Annotated regions:
phrase: IIIVAATNRPDILDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: SVNLKALAQRTPGFSGADLENLLNEAALVAARRSKAKIDMADID
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: RVISDKERNIVANHEAGHVVVGLMLDDAEIVHKVTIVPRGQAGGYAVMLPKEDRYFMTKPELLDKIAGLLGGRVAEEIVLGEVSTGAHNDFQRATGIARSMVTEYGMSEKLGPMQFGQSQGQVFLGRDFNSEQNYSESIAYEIDLEIQRIIKEQYERTKKILTEKRDLLDLIASTLLKVETLDAEQINH
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: ILLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGENEGIIIVAATNRPDILDPALLRPGRFDRQITV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: LLYGLIFLAIMGIFSSLNNTNPKMEPIRYDEFITALEGGKVKNATFQPVNLVFEVRGTMEGAEKGETFITNVPMNDETLMNDIRSIAKTTNTE
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular

phrase: IPKGILLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGENEGIIIVAATNRPDILDPALLRPGRFDRQITVGRP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain
Protein sequence:
MSTTSDFQTGERVRVAHQGNPQSSSLQADMDAKKALLSQNLNNGHLTARPPRTTGPGIKYGEKKPKKQKGSDDDDEDYVDETMPSEDEEDFDNNEEDEDDDDYEEEGPRKRKAPSKKKLVYPRENYRREDSETPEPEMKRIRTLSDSSDDEWMTKPRLNGSESPIGNVMRTQMAKRSAASKRKIVIDDESEDDFINDEEISEKGSGKGSEKEESEGSGKDSETEEVTMKQGQSLKAAMAKAQKEQKKKAESDEDWEEDEDDMNADGDETPSDDSDIEERRAKRGETKNQKECREFFNKAKKEDLLQQARINDKIADFVLANRPFEIYGAMVAKMKGVTRGTNAIEAYMEFLEKRGILSRILDDCKDHAHTVTKDFERCTEGPLQLPLLKEGCTLHDYQLIGVKWLIMMYNKDLNAILGDEMGLGKTIQIVAFLSYLKQIGKTGPHLIVVPSSTIENWIGEFHKWCPSIQLLTYYGSQDERKHLRHRVKKQKDHIDVILTTYNMVTSKSDDKKFFKNFSLNYVIYDEGHMLKNCDSERYRGLMKVKGKKKILLTGTPLQNNLIELISLMYFVLSKVFNKYCEDITHLLQHFKQLGPALDTKNKALYQQDRIEEAKAILQPYILRRLKNQVLGSLPSKSEQIIEVEMKKPQKQLYDNIVEALQQSEESGDSYGSLMRLRQAANHPLLRRSEYTDQKLDKIAKMLCLREKAYADKKWQHVSEDLAWLSDIKIHQLCERFRCTSKFLLNEQLALKSGKCEQLDVMLPEIQKKGDKVLIFSQFTSMLDILEVYLNIRGYSYKRLDGQTPVLDRQEMINEFNLSKDLFVFLLSTRAGGLGINLTSANHIIIHDIDFNPYNDKQAEDRCHRMGQEKPVHVTRLVSKGTVEVGMLALAKKKLQLEKQVTDGVKGQLDEDALRELKEEEGGEQCGGRDLSKLLSSAISGRYDDVEDDSGDSKNGIDAEEAAKKEDEAVKEPVEKEQQKEEESQPSTSA

Annotated regions:
phrase: QLDVMLPEIQKKGDKVLIFSQFTSMLDILEVYLNIRGYSYKRLDGQTPVLDRQEMINEFNLSKDLFVFLLSTRAGGLGINLTSANHIIIHDIDFNPYNDKQAEDRCHRMGQEKPVHVTRLVSKGTVEVGMLALAKKKLQLEKQVTDGVKGQLDED
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: SGKCEQLDVMLPEIQKKGDKVLIFSQFTSMLDILEVYLNIRGYSYKRLDGQTPVLDRQEMINEFNLSKDLFVFLLSTRAGGLGINLTSANHIIIHDIDFNPYNDKQAEDRCHRMGQEKPVHVTRL
type: DOMAIN
name: SNF2/RAD54-like_C
description: SNF2/RAD5-like, C-terminal helicase domain

phrase: DILEVYLNIRGYSYKRLDGQTPVLDRQEMINEFNLSKDLFVFLLSTRAGGLGINLTSANHIIIHDIDFNPYNDKQAEDRCHRM
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: CEQLDVMLPEIQKKGDKVLIFSQFTSMLDILEVYLNIRGYSYKRLDGQTPVLDRQEMINEFNLSKDLFVFLLSTRAGGLGINLTSANHIIIHDIDFNPYNDKQAEDRCHRM
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: IMMYNKDLNAILGDEMGLGKTIQIVAFLSYLKQIGKTGPHLIVVPSSTIENWIGEFHKWCPSIQLLTYYGSQDERKHLRHRVKKQKDHIDVILTTYNMVTSKSDDKKFFKNFSLNYVIYDEGHMLKNCDSERYRGLMKVKGKKKILLTGTPLQNNLIELISLMYFVLS
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: EGCTLHDYQLIGVKWLIMMYNKDLNAILGDEMGLGKTIQIVAFLSYLKQIGKTGPHLIVVPSSTIENWIGEFHKWCPSIQLLTYYGSQDERKHLRHRVKKQKDHIDVILTTYNMVTSKSDDKKFFKNFSLNYVIYDEGHMLKNCDSERYRGLMKVKGKKKILLTGTPLQNNLIELISLMYFVLSKVFNKYCEDITH
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: YQLIGVKWLIMMYNKDLNAILGDEMGLGKTIQIVAFLSYLKQIGKTGPHLIVVPSSTIENWIGEFHKWCPSIQLLTYYGSQDERKHLRHRVKKQKDHIDVILTTYNMVTSKSDDKKFFKNFSLNYVIYDEGHMLKNCDSERYRGLMKVKGKKKILLTGTPLQNNLIELISLMYFVLSKVFNKYCEDITHLLQHFKQLGPALDTKNKALYQQDRIEEAKAILQPYILRRLKNQVLGSLPSKSEQIIEVEMKKPQKQLYDNIVEALQQSEESGDSYGSLMRLRQAANH
type: DOMAIN
name: SNF2_N
description: SNF2, N-terminal
Protein sequence:
MLASAPVSRNSAIDLPAEVASAASAPPPAAAARSVVLVGMPGAGKTAIGKRLAARLGLPFRDADAEIESAAGMPITEIFSRYGEPHFRDGERRVITRLLAGPPLVLATGGGAFADAATRRAIKASGAATLWLRCSMATLLRRVAGREHRPMFLNADPAEVLQRLMSARHPSYAEADVTVTCTDESPEVTTRRVEEALAAAVTPQRLSVGLGDRGYDVLVGPGLLARAGGLIGPVLPARKAVVLTDASVAPLHLPALRAGLEAAGFDMLAEVAVPPGEASKDFSRLQEVLETVLSEGLDRRTAVIALGGGVVGDLAGFAAAVAMRGVPFVQIPTTLLAQVDSSVGGKTGVNLRAGKNLAGAFHQPRIVLADTDTLATLPARELRAGYAEVAKHGLLQGALWNWCEQHGTAVVAGESAALTHAVLESCRLKAAVVAADEREESAEGGRALLNLGHTFGHALEAEARFDGTVLHGEAVAVGLGLAASLSARLGHCSQEWPSRVIAHLAACGLPSRIADLPRRFTVEALMGRMAKDKKNRDGKMRFVLMRAAGDCFTSSEVPAEAVTALLRDEGAG

Annotated regions:
phrase: GYAEVAKHGLLQGALWNWCEQHGTAVVAGESAALTHAVLESCRLKAAVVAADEREESAEGGRALLNLGHTFGHALEAEARFDGTVLHGEAVAVGLGLAASLSARLGHCSQEWPSRVIAHLAACGLPSRIADLPRRFTVEALMGRMAKDKK
type: DOMAIN
name: DHQS_C
description: 3-dehydroquinate synthase, C-terminal domain

phrase: RDGERRVITRLLAGPPLVLATGGGA
type: CONSERVED_SITE
name: Shikimate_kinase_CS
description: Shikimate kinase, conserved site

phrase: VAVPPGEASKDFSRLQEVLETVLSEGLDRRTAVIALGGGVVGDLAGFAAAVAMRGVPFVQIPTTLLAQVDSSVGGKTGVNLRAGKNLAGAFHQPRIVLADTDTLATLPAREL
type: DOMAIN
name: DHQS/DOIS_N
description: 3-dehydroquinate synthase, N-terminal domain
Protein sequence:
MADDLGLDLGKKKKSKKVIKIDGDDAPVETGVEAVEDGLGELNLGAKKKKKTPKTAGEEVVEEKVPTLEIGIGAQNLIDAKGAWPDYTYEEALTLVYQVMKDKNPDFAGDKKKFAIKLPEVARAGSKKTAFSNFLEICRLMKRQDKHVLQFLLAELGTTGSIDGSNCLIVKGRWQQKQFESVLRKYIKEYVMCHTCKSPETQLTKDTRLFFLQCTNCGSRCSVTAIKSGFKAVVGKRAAIRRAEEATAGK

Annotated regions:
phrase: KKKFAIKLPEVARAGSKKTAFSNFLEICRLMKRQDKHVLQFLLAELGTTGSIDGSNCLIVKGRWQQKQFESVLRKYIKEYVMCHTCKSPETQLTKDTRLFFLQCTNCGS
type: DOMAIN
name: Transl_init_fac_IF2/IF5_dom
description: Translation initiation factor IF2/IF5 domain

phrase: DKKKFAIKLPEVARAGSKKTAFSNFLEICRLMKRQDKHVLQFLLAELGTTGSIDGSNCLIVKGRWQQKQFESVLRKYIKEYVMCHTCKSPETQLTKDTRLFFLQCTNCGS
type: DOMAIN
name: Transl_init_fac_IF2/IF5_dom
description: Translation initiation factor IF2/IF5 domain
Protein sequence:
MPPKVQTPTKNNNSAADAQTLPLLGRSVEELTAWVQEQGQPAYRGKQLHNWLYQHGARSLAEITVFPQQWRHTMADFPVGRSEIAYRSQAGDGTVKYLLRLADGMTVETVGIPTAKRLTVCVSSQVGCPMACDFCATGKGGFDRNLTVNEIVDQVLTVQEDFQRRVSHIVFMGMGEPLLNMTHVLGAVRCINEDIGIGQRCITVSTVGIRDRIRRLAQVRGQFTLAVSLHAGNQTLRERLVPTARNYPLPDLIAECREYVQITGRRLTFEYILLAGVNDNLENAAQLAQMLRGFQSHVNLIPYNPIKEAHYQRPDPERVQAFADALEQRHIAVSVRYSRGLEADAACGQLRAGAK

Annotated regions:
phrase: LLGRSVEELTAWVQEQGQPAYRGKQLHNWLYQHGARSLAEITVFPQQWRHTM
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: SSQVGCPMACDFCATGKGGFDRNLTVNEIVDQVLTVQEDFQRRVSHIVFMGMGEPLLNMTHVLGAVRCINEDIGIGQRCITVSTVGIRDRIRRLAQVRGQFTLAVSLHAGNQTLRERLVPTARNYPLPDLIAECREYVQITGRRLTFEYILLAGVNDNLENAAQ
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LTVCVSSQVGCPMACDFCATGKGGFDRNLTVNEIVDQVLTVQEDFQRRVSHIVFMGMGEPLLNMTHVLGAVRCINEDIGIGQRCITVSTVGIRDRIRRLAQVRGQFTLAVSLHAGNQTLRERLVPTARNYPLPDLIAECREYVQITGRRLTFEYILLAGVNDNLENAAQLAQMLRGFQSHVNLIPYNPIKEAHYQRPDPERVQAFADALE
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: TAKRLTVCVSSQVGCPMACDFCATGKGGFDRNLTVNEIVDQVLTVQEDFQRRVSHIVFMGMGEPLLNMTHVLGAVRCINEDIGIGQRCITVSTVGIRDRIRRLAQVRGQFTLAVSLHAGNQTLRERLVPTARNYPLPDLIAECREYVQITGRRLTFEYILLAGVNDNLENAAQLAQMLRGFQSHVNLIPYNPIKEAHYQRPDPERVQAFADALEQRHIAVSVRYSRGL
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MRVKTGTVRRKRHKKILKMAKGFYSGRRKHFRKAKEQVERSLVYAFRDRKQKKRDFRKLWIIRINAACRLNDISYSRFINGLKKANIDLDRKILADLAMNEPEVFAQIVEKAKAAL

Annotated regions:
phrase: KRDFRKLWIIRINAAC
type: CONSERVED_SITE
name: RIBOSOMAL_L20_CS
description: Large ribosomal subunit protein bL20, conserved site
Protein sequence:
MSGSTGERSFADIITSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTENRQGIPLITGRFDPLEQLDEFSRSF

Annotated regions:
phrase: LAYDVFGSPRPNEYFTENRQGIPLITGRFDPLEQLDE
type: DOMAIN
name: PSII_cytb559_asu_lum
description: Photosystem II cytochrome b559, alpha subunit, lumenal region

phrase: ITSIRYWVIHSITI
type: CONSERVED_SITE
name: PSII_cyt_b559_CS
description: Photosystem II cytochrome b559, conserved site

phrase: GERSFADIITSIRYWVIHSITIPSLFIA
type: DOMAIN
name: PSII_cyt_b559_N
description: Photosystem II cytochrome b559, N-terminal
Protein sequence:
MQVLHVCSELFPLLKTGGLADVVGALPAAQIAAGDDTRVLLPAFPDLKKGITQIQVVAQLQTFAGYVELHFGHFNGVGIYLIDAPGLYDRPGSPYHDESQYAYSDNYLRFALLGWVSCELACGLDPWWRPEVVHAHDWHAGLSCAYLAARGRPAKSVFTVHNLAYQGLFNARHMEQIQLPHSFFDVYGMEFHGQISYLKAGLFYADHVTAVSPTYAREITQPEFGYGMEGLLKQRLLEGRLSGILNGVDPAIWNPAHDLLLAARYNRDVLDAKRENKRQLQIAMGLKIDEKAPIFAVVSRLTKQKGLDLVLEALPGLLEQGGQLVVLGAGDAELQQGFLAAAAENPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYALKYGTLPLVRRTGGLADTVNDCSLENLADGIASGFSFEDSNAWSLLRAIRRSFVLWSRPSLWRYVQRQAMGMDFSWQVAAVAYRDLYQRLL

Annotated regions:
phrase: LKIDEKAPIFAVVSRLTKQKGLDLVLEALPGLLEQGGQLVVLGAGDAELQQGFLAAAAENPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYALKYGTLPLVRRTGGLADTVNDCSLENLADGIASGFSFEDSNAWSLLRAIR
type: DOMAIN
name: Glyco_trans_1
description: Glycosyl transferase, family 1

phrase: QVLHVCSELFPLLKTGGLADVVGALPAAQIAAGDDTRVLLPAFPDLKKGITQIQVVAQLQTFAGYVELHFGHFNGVGIYLIDAPGLYDRPGSPYHDESQYAYSDNYLRFALLGWVSCELACGLDPWWRPEVVHAHDWHAGLSCAYLAARGRPAKSVFTVHNLAYQGLFNARHMEQIQLPHSFFDVYGMEFHGQISYLKAGLFYADHVTAVSPTYAREITQPEFGYGMEGLL
type: DOMAIN
name: Starch_synth_cat_dom
description: Starch synthase, catalytic domain
Protein sequence:
MKYIVALDQGTTSSRAILFDESQNIIGVAQKEFTQIYPNEGWVEHDPMEIWSSQSGVLSEVIARAGISQHDIIALGITNQRETTIVWDKNTGKPVYNAIVWQCRRTAKICDELKEIEGFSDYVKDNTGLLVDAYFSGTKIKWILDNVEGARERAEKGELLFGTVDTWLIWKLTNGKIHATDYTNASRTMLYNIKELKWDEKILETLNIPKSMLPEVKDSSGTFGYANLGGKGGHRIPIAGVAGDQQSALFGQACFEEGESKNTYGTGCFLLMNTGEKFVKSNNGLITTIAIGLNGKVQYALEGSVFVGGASVQWLRDELKLISDSKDTEYFARKVKDSAGVYVVPAFVGLGAPYWDMYARGAILGLTRGANKNHIIRATLESIAYQTKDVLKAMEEDSGIKLNGLKVDGGAAANNFLMEFQADILGESVKRPTVLETTALGAAYLAGLAVGFWENKNEIKQKWVLDKEFTPNMPKEERDKKYAGWLKAVERTKKWEE

Annotated regions:
phrase: NTYGTGCFLLMNTGEKFVKSNNGLITTIAIGLNGKVQYALEGSVFVGGASVQWLRDELKLISDSKDTEYFARKVKDSAGVYVVPAFVGLGAPYWDMYARGAILGLTRGANKNHIIRATLESIAYQTKDVLKAMEEDSGIKLNGLKVDGGAAANNFLMEFQADILGESVKRPTVLETTALGAAYLAGL
type: DOMAIN
name: FGGY_C
description: Carbohydrate kinase FGGY, C-terminal

phrase: GAILGLTRGANKNHIIRATL
type: CONSERVED_SITE
name: Carb_kinase_FGGY_CS
description: Carbohydrate kinase, FGGY, conserved site

phrase: YFSGTKIKWILD
type: CONSERVED_SITE
name: Carb_kinase_FGGY_CS
description: Carbohydrate kinase, FGGY, conserved site

phrase: YIVALDQGTTSSRAILFDESQNIIGVAQKEFTQIYPNEGWVEHDPMEIWSSQSGVLSEVIARAGISQHDIIALGITNQRETTIVWDKNTGKPVYNAIVWQCRRTAKICDELKEIEGFSDYVKDNTGLLVDAYFSGTKIKWILDNVEGARERAEKGELLFGTVDTWLIWKLTNGKIHATDYTNASRTMLYNIKELKWDEKILETLNIPKSMLPEVKDSSGTFGYANLGGKGGHRIPIAGVAGDQQSALF
type: DOMAIN
name: FGGY_N
description: Carbohydrate kinase FGGY, N-terminal
Protein sequence:
MIMKLVEDLLNKNLDIDEYVERTYERIEKIEKKIKAFITIRDKEEVKREVREKLKNPKGKLSGILIAIKDNISTKGIRTTCASRMLEDYVPPYDATVIEKLKQEGAVILGKTNMDEFAMGSTTETSYFGPTRNPWDLERTPGGSSGGSGAALAAGIVDIALGSDTGGSIRAPAAYNAVFGLKPSYGTVSRFGLVAYANSLEQIGPMAKNAEDLALLYSIISGDDPKDATTIHFEPQVPEKVELKDVKIAVLKDIVEASDKPVVSIFNSTLDKLSSEGAIIKEVNLGYAEYALPAYYIIAMSEASSNLARFDGVRYGYSKYSEGNWRETFAKNRGEGFGIEVKRRILLGSFILSAGYYEEFYIKALKIRRLIKDNVDNILKEFDLIASPTMPILPPKIGEVVEDPIKMYAMDLNTVIANLAGVPALSQPAGFYNNLPIGLQLMGRYLSDYYIMAISAKIEKVLNLYDLTAPIS

Annotated regions:
phrase: EYVERTYERIEKIEKKIKAFITIRDKEEVKREVREKLKNPKGKLSGILIAIKDNISTKGIRTTCASRMLEDYVPPYDATVIEKLKQEGAVILGKTNMDEFAMGSTTETSYFGPTRNPWDLERTPGGSSGGSGAALAAGIVDIALGSDTGGSIRAPAAYNAVFGLKPSYGTVSRFGLVAYANSLEQIGPMAKNAEDLALLYSIISGDDPKDATTIHFEPQVPEKVELKDVKIAVLKDIVEASDKPVVSIFNSTLDKLSSEGAIIKEVNLGYAEYALPAYYIIAMSEASSNLARFDGVRYGYSKYSEGNWRETFAKNRGEGFGIEVKRRILLGSFILSAGYYEEFYIKALKIRRLIKDNVDNILKEFDLIASPTMPILPPKIGEVVEDPIKMYAMDLNTVIANLAGVPALSQPAGFYNNLPIGLQLMGRYLSD
type: DOMAIN
name: Amidase_dom
description: Amidase signature domain

phrase: GGSSGGSGAALAAGIVDIALGSDTGGSIRAP
type: CONSERVED_SITE
name: Amidase_CS
description: Amidase, conserved site
Protein sequence:
MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYGGDSELQLERINVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRTMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMVCAADPRHGRYLTASAVFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPIGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESDMNDLVSEYQQYQDATADDEEYEEEEEYEAEA

Annotated regions:
phrase: LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMVCAADPRHGRYLTASAVFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPIGLKMASTFIGNSTSIQEMFRRVS
type: DOMAIN
name: Tubulin/FtsZ_2-layer-sand-dom
description: Tubulin/FtsZ, 2-layer sandwich domain

phrase: GGGTGS
type: CONSERVED_SITE
name: Tubulin_CS
description: Tubulin, conserved site

phrase: INVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRTMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFP
type: DOMAIN
name: Tubulin_FtsZ_GTPase
description: Tubulin/FtsZ, GTPase domain

phrase: EILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYGGDSELQLERINVYYNEASCGRFVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRTMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDI
type: DOMAIN
name: Tubulin_FtsZ_GTPase
description: Tubulin/FtsZ, GTPase domain

phrase: MRE
type: BINDING_SITE
name: Beta-tubulin_BS
description: Beta tubulin, autoregulation binding site

phrase: PRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMVCAADPRHGRYLTASAVFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSTVCDIPPIGLKMASTFIGNSTSIQEMFRRV
type: DOMAIN
name: Tubulin/FtsZ_2-layer-sand-dom
description: Tubulin/FtsZ, 2-layer sandwich domain
Protein sequence:
MSLSIIFMGTPEFSVPTLRLLVDAGHRIVAVYTQPPRPGGRRGLDLQKSPVHQAAELLGLPVFTPVNFKDPEERERFAALKADVAVVVAYGLLLPEAVLNGTRDGCYNGHASLLPRWRGAAPIQRAIMAGDAETGMMVMKMDKGLDTGAVALTRKVEIGPNMTAGELHDRLMQVGAKAMAEAMVKLEMNDLPLTPQPQDGVLYAAKIDKAETRIDFARPALDVHNHIRGLAPFPGAWFELEIGGKPERVKVLGSELAEGQGAAGELLTDDLVVACASGAVRLTRLQKAGGKPLAAADFLRGTPLAAGMRLS

Annotated regions:
phrase: LSIIFMGTPEFSVPTLRLLVDAGHRIVAVYTQPPRPGGRRGLDLQKSPVHQAAELLGLPVFTPVNFKDPEERERFAALKADVAVVVAYGLLLPEAVLNGTRDGCYNGHASLLPRWRGAAPIQRAIMAGDAETGMMVMKMDKGLDTGAVALTRKVEIGPNMTAGELHDRLMQVGAKAMAEAMVKLEMNDLPLTPQPQDGVLYAAK
type: DOMAIN
name: Met-tRNA-FMT_N
description: Methionyl-tRNA formyltransferase, N-terminal domain

phrase: FMGTPEFSVPTLRLLVDAGHRIVAVYTQPPRPGGRRGLDLQKSPVHQAAELLGLPVFTPVNFKDPEERERFAALKADVAVVVAYGLLLPEAVLNGTRDGCYNGHASLLPRWRGAAPIQRAIMAGDAETGMMVMKMDKGLDTGAVALTRKVEIGPNMTAGELHDRLMQVGAKAMAE
type: DOMAIN
name: Formyl_transf_N
description: Formyl transferase, N-terminal

phrase: AETRIDFARPALDVHNHIRGLAPFPGAWFELEIGGKPERVKVLGSELAEGQGAAGELLTDDLVVACASGAVRLTRLQKAGGKPLA
type: DOMAIN
name: Met-tRNA-FMT_C
description: Methionyl-tRNA formyltransferase, C-terminal domain

phrase: GMMVMKMDKGLDTGAVALTRKVE
type: ACTIVE_SITE
name: GART_AS
description: Phosphoribosylglycinamide formyltransferase, active site

phrase: KIDKAETRIDFARPALDVHNHIRGLAPFPGAWFELEIGGKPERVKVLGSELAEGQGAAGELLTDDLVVACASGAVRLTRLQKAGGKPLAAADFLRG
type: DOMAIN
name: Formyl_trans_C
description: Formyl transferase, C-terminal
Protein sequence:
MANIYYDEDASLDYLKDKTVAIIGYGSQGHAHALNLRDSGIKVIIGLLAGSRSIEKAKAEGFEVYSPDEAAKKADVIMILTPDTVQPALYQSAILPNLDEGNALAFAHGFNIHFGQIVPPSYVDVFLVAPKGPGHLVRWMYEEGKGVPGLFAVYQDFTGKAREIAMAYAKGIGATRAGLIETTFKEETETDLFGEQAVLCGGATALIKAGFETLIEAGYQPEVAYFECLHELKLIVDLIYQYGISGMRYSISDTARYGDVTRGKRVYEAVKPLYKKILEEIQEGEFAKEWILENVANRPHFNALVKKDEEHPVEKVGKELRKMMPWLGGRGL

Annotated regions:
phrase: TFKEETETDLFGEQAVLCGGATALIKAGFETLIEAGYQPEVAYFECLHELKLIVDLIYQYGISGMRYSISDTARYGDVTRGKRVYEAVKPLYKKILEEIQEGEFAKEWILENVANRPHFNALVKKDEEHPVEKVGKELRKMMPW
type: DOMAIN
name: KARI_C
description: Ketol-acid reductoisomerase, C-terminal

phrase: FKEETETDLFGEQAVLCGGATALIKAGFETLIEAGYQPEVAYFECLHELKLIVDLIYQYGISGMRYSISDTARYGDVTRGKRVYEAVKPLYKKILEEIQEGEFAKEWILENVANRPHFNALVKKDEEHPVEKVGKELRKMMP
type: DOMAIN
name: KARI_C
description: Ketol-acid reductoisomerase, C-terminal

phrase: LKDKTVAIIGYGSQGHAHALNLRDSGIKVIIGLLAGSRSIEKAKAEGFEVYSPDEAAKKADVIMILTPDTVQPALYQSAILPNLDEGNALAFAHGFNIHFGQIVPPSYVDVFLVAPKGPGHLVRWMYEEGKGVPGLFAVYQDFTGKAREIAMAYAKGIGATRA
type: DOMAIN
name: KARI_N
description: Ketol-acid reductoisomerase, N-terminal

phrase: ANIYYDEDASLDYLKDKTVAIIGYGSQGHAHALNLRDSGIKVIIGLLAGSRSIEKAKAEGFEVYSPDEAAKKADVIMILTPDTVQPALYQSAILPNLDEGNALAFAHGFNIHFGQIVPPSYVDVFLVAPKGPGHLVRWMYEEGKGVPGLFAVYQDFTGKAREIAMAYAKGIGATRAGLIE
type: DOMAIN
name: KARI_N
description: Ketol-acid reductoisomerase, N-terminal
Protein sequence:
MAATRLWHRTGRLLEIASAFGPWPGVYSTSPAFAEVLRMPQKQLRKVVYPLRELEQHLVTDSRPGLIEQRLFDPSLEDIGRAESVFAATVRNRIEYLSSAVRLDHAPSLRQPEVCFIGRSNVGKSSLIKALFSMAPDVEVRISKKPGHTKKMNFFKVGKHFTLVDMPGYGYRAPEDFVDMVETYLKERNNLKRTFLLVDSVVGITKLDNIAIEMCEEFALPYVMILTKIDKSSKGYLLKQVLQIQEFVNTQTQGCFPQLFPISAVTYSGVHLLKCFIADITGSLK

Annotated regions:
phrase: EVCFIGRSNVGKSSLIKALFSMAPDVEVRISKKPGHTKKMNFFKVGKHFTLVDMPGYGYRAPEDFVDMVETYLKERNNLKRTFLLVDSVVGITKLDNIAIEMCEEFALPYVMILTKIDKSSKGYLLKQVLQIQEFVNTQTQGCFPQLFPISAVTYSGVHLLKCFIADI
type: DOMAIN
name: G_ENGB_dom
description: EngB-type guanine nucleotide-binding (G) domain

phrase: EVCFIGRSNVGKSSLIKALFSMAPDVEVRISKKPGHTKKMNFFKVGKHFTLVDMPGYGYRAPEDFVDMVETYLKERNNLKRTFLLVDSVVGITKLDNIAIEMCEEFALPYVMILT
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: RQPEVCFIGRSNVGKSSLIKALFSMAPDVEVRISKKPGHTKKMNFFKVGKHFTLVDMPGYGYRAPEDFVDMVETYLKERNNLKRTFLLVDSVVGITKLDNIAIEMCEEFALPYVMILTKIDKSSKGYLLKQVLQIQEFVNTQTQGCFPQLFPISAVTYSGVHLLKCFIADITG
type: DOMAIN
name: G_ENGB_dom
description: EngB-type guanine nucleotide-binding (G) domain
Protein sequence:
MASLVTLPAIAFSNPATASGAVRLRAAAFRCWALRRRGWAVAAAVASPNSVLSEHAFKRLQLGSDDEDEEGPYGSDADEGFQGDEEELAIARLGLPDELVATLEKRGITHLFPIQRAVLIPALGGRDLIARAKTGTGKTLAFGIPMIKQLMEQDDGRSTRRGRTPRVLVLAPTRELAKQVEKEIKESAPKLGTVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVQYLVLDEADQMLAVGFEEDVETILQQLPADRQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLHAIPLTATSKRTILSDLITVYAKGGKTIVFTRTKKDADEVSLALTTSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTSSQKRTVMSLERDVGCKFEFISPPSIEEVLESSAEHVIATLRGVHPESTQYFLGAAEKLTEELGPHALASALAHLSGFSQPPSSRSLISYEQGWVTLQLTREPGYGRGFFSPRSVTGFLSDVCSAAADEVGKIYITADENVQGAVFDLPEEIAKDLLTMEVPPGNTLTKISKLPALQDDSPATDSYGRFSNDRGSRNRRSRGGGASRGRGGWDTDSEDRYRRGGRSLRSDNDSWSDDDWSGGGRKSNRSSSSFGGRSSSYGSRGSPSPSFGVRSSSLGGRESSRSFSGACFNCGESGHRASDCPNK

Annotated regions:
phrase: GFSQPPSSRSLISYEQGWVTLQLTREPGYGRGFFSPRSVTGFLSDVCSAAADEVGKIYITADENVQGAVFDLPEEIAKDLLTMEVPPGNTLTKISKLPAL
type: DOMAIN
name: GUCT
description: GUCT

phrase: CFNCGESGHRASDCP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: ACFNCGESGHRASDCP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: ILSDLITVYAKGGKTIVFTRTKKDADEVSLALTTSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTSSQKRTVMSLERDVGCKFEFISPPSIEEV
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: DEVSLALTTSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRA
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: GITHLFPIQRAVLIPALGGRDLIARAKTGTGKTLAFGIPMIKQLMEQDDGRSTRRGRTPRVLVLAPTRELAKQVEKEIKESAPKLGTVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVQYLVLDEADQMLAVGFEEDVETILQQLPADRQSMLFSATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKL
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: PIQRAVLIPALGGRDLIARAKTGTGKTLAFGIPMIKQLMEQDDGRSTRRGRTPRVLVLAPTRELAKQVEKEIKESAPKLGTVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVQYLVLDEADQMLAVGFEEDVETILQQLPADRQSMLFSATMPSWVK
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: KRTILSDLITVYAKGGKTIVFTRTKKDADEVSLALTTSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRA
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: ACFNCGESGHRASDCP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: LAIARLGLPDELVATLEKRGITHLFPIQ
type: DOMAIN
name: RNA_helicase_DEAD_Q_motif
description: RNA helicase, DEAD-box type, Q motif

phrase: LIPALGGRDLIARAKTGTGKTLAFGIPMIKQLMEQDDGRSTRRGRTPRVLVLAPTRELAKQVEKEIKESAPKLGTVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVQYLVLDEADQMLAVGFEEDVETILQQLPADRQSMLFSATMPSWVKKLSRRYLNNPLT
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain
Protein sequence:
MVDVQAQRKQIEKLISLNRVTKVVKGGRRFSFAAFMVVGDGEGYVGWGFGKANDASDAIKKSLTSARKNLRFVPIRKGTLPHEVIGCFKKAKVLIKPATHGTGVIAGGPVRAVMEALGVHDILSKSLGSNNSMNVVKATFKAFDLVLNAEKVAEMRGKKTLKTLWG

Annotated regions:
phrase: GRRFSFAAFMVVGDGEGYVGWGFGKANDASDA
type: CONSERVED_SITE
name: Ribosomal_uS5_N_CS
description: Small ribosomal subunit protein uS5, N-terminal, conserved site

phrase: EKLISLNRVTKVVKGGRRFSFAAFMVVGDGEGYVGWGFGKANDASDAIKKSLTSARKNLRFV
type: DOMAIN
name: Ribosomal_uS5_N
description: Small ribosomal subunit protein uS5, N-terminal

phrase: GCFKKAKVLIKPATHGTGVIAGGPVRAVMEALGVHDILSKSLGSNNSMNVVKATFKAFDLVLNAEKVAEM
type: DOMAIN
name: Ribosomal_uS5_C
description: Small ribosomal subunit protein uS5, C-terminal

phrase: QIEKLISLNRVTKVVKGGRRFSFAAFMVVGDGEGYVGWGFGKANDASDAIKKSLTSARKNLRF
type: DOMAIN
name: Ribosomal_uS5_N
description: Small ribosomal subunit protein uS5, N-terminal
Protein sequence:
MEVYIPSFRHEDSDLERGYTVFKIEVLMNGRKHFVEKRYSEFHALHKKLKKCIKTPEIPSKHVRNWVPKVLEQRRQGLETYLQAVILENEELPKLFLDFLNVRHLPSLPKAESCGSFDETESEESSKLSHQPVLLFLGDPYVLPAASDFPNVVIEGVLHGIFFSHLQPR

Annotated regions:
phrase: MEVYIPSFRHEDSDLERGYTVFKIEVLMNGRKHFVEKRYSEFHALHKKLKKCIKTPEIPSKHVRNWVPKVLEQRRQGLETYLQAVILENEELPKLFLDFLNV
type: DOMAIN
name: PX_dom
description: Phox homology

phrase: MEVYIPSFRHEDSDLERGYTVFKIEVLMNGRKHFVEKRYSEFHALHKKLKKCIKTPEIPSKHVRNWVPKVLEQRRQGLETYLQAVILENEELPKLFLDFLNVRHLPSLPKAESCGSFDETESEE
type: DOMAIN
name: PX_dom
description: Phox homology

phrase: NGRKHFVEKRYSEFHALHKKLKKCIKTPEIPSKHVRNWVPKVLEQRRQGLETYLQAVILENEELPKLFLDFLN
type: DOMAIN
name: PX_dom
description: Phox homology
Protein sequence:
MKLVVATHNEGKLVEIRRILVEDLGADADRIELVSAGSLGLPDPVETGVSFEQNALLKARDVVRRTGLPAVADDSGLIVDVLGAAPGILSARWAGRHGDDVANYELLLAQIEDIPDRNRNARFRCAAALVVPEPGQTEAPYELHNETVQLGDMKGMINRAPKGEHGFGYDPIFVPEEQPARAVEAGETLTSAEMTPDEKNAISHRSKALKRLAPLIRTMVLD

Annotated regions: