nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MISTDSLARIALDLQLGISHQDRFHRLIQSVRSLLHSDASALLRYEGGQFIPLAIDGLMQDVLGRRFALADHPRMEAIARAGDVVRFPADSNLPDPYDGLIPDHDDFRVHACVGLPLFSDQTLIGALTIDGMNPTQFDGISDEELRLVGALAAAALSNALLLERLARQSSEPLAPSTQNGPGRAEMIGRSPAMDRLRHEINVVASSELNVLILGETGVGKELIAKAVHQGSPRASAPLVYLNCAALPESVAESELFGHVKGAFTGAIHNRAGKFELADKGTLFLDEIGELSLSLQAKLLRVLQYGDLQRIGDDTPLKVNVRILAATNRDLKQAVVEGQFRSDLYHRLSVFPIHAPALRERPDDIPLLAGYFCERCRVSLGLERLRIEPRALQLLGSYDWPGNVRELEHAIHRAAVLARAEQGSQAPALECHHFNLAAAGAPSSSRIPVEQVAQQMTAGMGLRTATDAFQLQLIEQTLAAQHGNWAATARALEMDGGNLHRLARRLGLKP

Annotated regions:
phrase: GKFELADKGTLFLDE
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_2
description: Sigma-54 interaction domain, ATP-binding site 2

phrase: QDRFHRLIQSVRSLLHSDASALLRYEGGQFIPLAIDGLMQDVLGRRFALADHPRMEAIARAGDVVRFPADSNLPDPYDGLIPDHDDFRVHACVGLPLFSDQTLIGALTIDGMNPTQFDGISDEELRLVGALAA
type: DOMAIN
name: GAF
description: GAF domain

phrase: SELNVLILGETGVGKELIAKAVHQGSPRASAPLVYLNCAALPESVAESELFGHVKGAFTGAIHNRAGKFELADKGTLFLDEIGELSLSLQAKLLRVLQYGDLQRIGDDTPLKVNVRILAATNRDLKQAVVEGQFRSDLYHRLS
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: SHQDRFHRLIQSVRSLLHSDASALLRYEGGQFIPLAIDGLMQDVLGRRFALADHPRMEAIARAGDVVRFPADSNLPDPYDGLIPDHDDFRVHACVGLPLFSDQTLIGALTIDGMNPTQFDGISDEELRLVGALAAAALSNALLLERL
type: DOMAIN
name: GAF
description: GAF domain

phrase: MIGRSPAMDRLRHEINVVASSELNVLILGETGVGKELIAKAVHQGSPRASAPLVYLNCAALPESVAESELFGHVKGAFTGAIHNRAGKFELADKGTLFLDEIGELSLSLQAKLLRVLQYGDLQRIGDDTPLKVNVRILAATNRDLKQAVVEGQFRSDLYHRLSVFPIHAPALRERPDDIPLLAGYFCERCRVSLGLERLRIEPRALQLLGSYDWPGNVRELEHAIHRAA
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: MIGRSPAMDRLRHEINVVASSELNVLILGETGVGKELIAKAVHQGSPRASAPLVYLNCAALPESVAESELFGHVKGAFTGAIHNRAGKFELADKGTLFLDEIGELSLSLQAKLLRVLQYGDLQRIGDDTPLKVNVRILAATNRDLKQAVVEGQFRSDLYHRLSVFPI
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: VLILGETGVGKEL
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_1
description: Sigma-54 interaction domain, ATP-binding site 1

phrase: WPGNVRELE
type: CONSERVED_SITE
name: Sigma_54_int_dom_CS
description: Sigma-54 interaction domain, conserved site
Protein sequence:
MRESAHTNTSLWSKGMMAVTSAQFLSAFGDNALLFATLALLKAEFYPDWSQPILQMVFVGAYILFAPFVGQVADSFPKGRVMMFANSLKLLGAASICFGFNPFIGYTLVGIGAAAYSPAKYGILGELTTGDKLVKANGLMESSTIAAILLGSVAGGVLADWHVLAALGICAVVYAGAVVANLFIPTLPVARPGQSWRFTPMTSSFFNACRVLWRDGETRFSLIGTSMFWGAGVTLRFLLVLWVPTALGITDNATPTYLNAMVAVGIVVGAGAAAKLVTLETVRRCMPAGILIGVGVLFFSLQHALLPAYGLLILIGILGGFFIVPLNALLQERGKHTVGAGNAIAVQNLGENTAMLLMLGLYSLAVKAGLPVVGIGVGFGALFALAITGLWIWQRRR

Annotated regions:
Protein sequence:
MMLGGGGGCGAGGTWLGFLVFLAVSLRNHSTCEDIDAEDRLMVDLFRGYNSLVQPVRNRSELPMIVKIGMQLVLLINVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAPEKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWVPPAIYKSSCIIDVEFFPFDDQLCSLTFGSWTYNRDEIKLDFLTSDRVDFSEYSTSSIWDMMDGPAVLTSDRSRIEFQIRIRRKTLFYTVVLILPTVLMAFLNVTVFYLPTASGEKMGLTMNVLLSIVVFLLLVSKILPPTSSSIPLVAKYLLLTFVLNIITIMVTTIICNIYFRSPITHRLPPWVRKVFLDILPLLMCMQRPHRKNVIQRSHRRLLETGPSVEENPMRSGEHHPLCRHTHNQDSCRRVRIQSDELDDELSPEAQRAIDAIEFITENRRDEEITKQFRDDWKFIASVVDRFLLYGFFGATVGGTIGIIFTAPSVFETFDENATLVKLKQLYDMGLANDTVLGIF

Annotated regions:
phrase: CIIDVEFFPFDDQL
type: CONSERVED_SITE
name: Neurotransmitter_ion_chnl_CS
description: Neurotransmitter-gated ion-channel, conserved site

phrase: LILPTVLMAFLNVTVFYLPTASGEKMGLTMNVLLSIVVFLLLVSKILPPTSSSIPLVAKYLLLTFVLNIITIMVTTIICNIYFRSPITHRLPPWVRKVFLDILPLLMCMQRPHRKNVIQRSHRRLLETGPSVEENPMRSGEHHPLCRHTHNQDSCRRVRIQSDELDDELSPEAQRAIDAIEFITENRRDEEITKQFRDDWKFIASVVDRFLLYGFFGATVGGTIG
type: DOMAIN
name: Neurotrans-gated_channel_TM
description: Neurotransmitter-gated ion-channel transmembrane domain

phrase: EDRLMVDLFRGYNSLVQPVRNRSELPMIVKIGMQLVLLINVDEKEQVMHTNVWLTMKWDDFQLKWDPRDYANITQIRVAPEKVWLPDIVLFNNADGNYEVSFMCNVLILSTGTVLWVPPAIYKSSCIIDVEFFPFDDQLCSLTFGSWTYNRDEIKLDFLTSDRVDFSEYSTSSIWDMMDGPAVLTSDRSRIEFQIRIRRK
type: DOMAIN
name: Neur_chan_lig-bd
description: Neurotransmitter-gated ion-channel ligand-binding domain
Protein sequence:
MSAQVIAIDAMGGDFGPRSIVQASIACLSATPSLHLTLVGQPSLLEELISGQTAVDRARLTITPASEVITMDEKPSQALRGKPDSSMRVALELLRDEKVQACVSAGNTGALMALSRYVLKTLPGIDRPAMVAAIPTQRGYCQLLDLGANVDCSAEHLLQFAVMGSVAAETLGIVRPRVALLNIGTEDIKGNQQVKLAASLLQQARGLNYIGFVEGDGLYRGEADVVVCDGFVGNILLKSSEGLATMIAARIEALFRQNLLSRAVGALALPLMRRLQADLAPARHNGASFLGLQGIVVKSHGSAGVQGFQSAIQRALIEIQEDLPRRLHGRLEDLLL

Annotated regions:
Protein sequence:
MSAKFVFVTGGVVSGLGKGITAASLGRLLKSRGLRITMQKFDPYLNVDPGTMNPFQHGEVFVTDDGAETDLDLGHYERFIDESLTQNSNVTAGRVYWNVIQKERNGDYGGGTVQVIPHITNEIKERIYEGKENVDVAIIEIGGTVGDIESQPFLEAIRQFATEVGRSNCLFIHVTLVPYLACSHEHKSKPTQHSVKELLSIGIQPDIIVLRSEKEIGEDVKQKIALFCNVSENCVIENLDLPLLYAVPLSLHEERLDDIVCKRFGLDTHGPELGEWIAMVNTAMSLTDSVTIALVGKYVELHDAYLSIAEALTHGGFGNKVKVNIKWVDSETIDDSNIDEVLSDADGILVPGGFGERGIEGMITAIHYARVNNVPFLGICLGMQLALVEIARNVIGIADANSAEFDPQSKNCVVDLMPEQKDVQQIGGTMRLGKYPCKLLPGSKAAGLYGNVPLIYERHRHRFEVNNDYRKKFESAGVVFSGRSPDDHIIEMMEIPLHPWFLGSQFHPEFKSRPNRPHPLFQGLINAAKAFKAKK

Annotated regions:
phrase: KFVFVTGGVVSGLGKGITAASLGRLLKSRGLRITMQKFDPYLNVDPGTMNPFQHGEVFVTDDGAETDLDLGHYERFIDESLTQNSNVTAGRVYWNVIQKERNGDYGGGTVQVIPHITNEIKERIYEGKENVDVAIIEIGGTVGDIESQPFLEAIRQFATEVGRSNCLFIHVTLVPYLACSHEHKSKPTQHSVKELLSIGIQPDIIVLRSEKEIGEDVKQKIALFCNVSENCVIENLDLPLLYAVPLSLHEERLDDIVCKRFG
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: LHDAYLSIAEALTHGGFGNKVKVNIKWVDSETIDDSNIDEVLSDADGILVPGGFGERGIEGMITAIHYARVNNVPFLGICLGMQLALVEIARNVIGIADANSAEFDPQSKNCVVDLMPEQKDVQQIGGTMRLGKYPCKLLPGSKAAGLYGNVPLIYERHRHRFEVNNDYRKKFESAGVVFSGRSPDDHIIEMMEIPLHPWFLGSQFHPEFKSRPNRPHPLFQGLI
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: VTIALVGKYVELHDAYLSIAEALTHGGFGNKVKVNIKWVDSETIDDSNIDEVLSDADGILVPGGFGERGIEGMITAIHYARVNNVPFLGICLGMQLALVEIARNVIGIADANSAEFDPQSKNCVVDLMPEQKDVQQIGGTMRLGKYPCKLLPGSKAAGLYGNVPLIYERHRHRFEVNNDYRKKFESAGVVFSGRSPDDHIIEMMEIPLHPWFLGSQFHPEFKSRPNRPHPLFQGL
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain

phrase: KFVFVTGGVVSGLGKGITAASLGRLLKSRGLRITMQKFDPYLNVDPGTMNPFQHGEVFVTDDGAETDLDLGHYERFIDESLTQNSNVTAGRVYWNVIQKERNGDYGGGTVQVIPHITNEIKERIYEGKENVDVAIIEIGGTVGDIESQPFLEAIRQFATEVGRSNCLFIHVTLVPYLACSHEHKSKPTQHSVKELLSIGIQPDIIVLRSEKEIGEDVKQKIALFCNVSENCVIENLDLPLLYAVPLSLHEERLDDIVC
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal
Protein sequence:
MTIALGKSSKEEQTLFDIMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL

Annotated regions:
phrase: NWTLNPFHMMGVAGVLGAALLCAIHG
type: CONSERVED_SITE
name: Photo_RC_L/M_CS
description: Photosynthetic reaction centre, L/M, conserved site
Protein sequence:
MERFLENAMYASRWLLAPVYFGLSLALIALALKFFQEIIHVLPNIFSMAESDLILVLLSLVDMTLVGGLLVMVMFSGYENFVSQLDISENKEKLNWLGKMDATSLKNKVAASIVAISSIHLLRVFMDAKNVPDNKLMWYVIIHLTFVLSAFVMGYLDRLTRHNH

Annotated regions:
Protein sequence:
MSGAKSLSELGLTARGGGRVSVTGLSVDSREAAPGHLFAALPGTRVHGARFAGQALERGAAAVLTDPEGADLCGDAVADAGAALVVAEEPRAALARAAALWFGAQPEVMAAVTGTNGKTSVASFLRQIWIALGHRAVNLGTTGVEGAWERPLRHTTPEPITLHRVLAEAAAAGVTHAAMEASSHGLDQRRLDGVVLAAAGFSSFSQDHLDYHSDLDAYFDAKAGLFIRVLGEEGTAVINLDAERGFDMAAIARARGQSVIGVGRGAEADLRIVAQRCDPQGQEVRLSFAGEAYQVRLGLVGDFQAWNAALAAGLAIGCGDAPERVMAALPALRTVRGRMQLAATRENGAGVYVDYAHTPDAIATALRALRPHVMGRLVAVIGAGGDRDRAKRPLMGQAARAHADEVFVTDDNPRSEDPAAIRAEVLAGAPEAREVGDRAEAILRAVAGLGPGDAALIAGKGHETGQEIAGVTYPFDDAEQASLAVAALEGRTA

Annotated regions:
phrase: VTGTNGKTSVASFLRQIWIALGHRAVNLGTTGVEGAWERPLRHTTPEPITLHRVLAEAAAAGVTHAAMEASSHGLDQRRLDGVVLAAAGFSSFSQDHLDYHSDLDAYFDAKAGLFIRVLGEEGTAVINLDAERGFDMAAIARARGQSVIGVGRGAEADLRIVAQRCDPQGQEVRLSFAGEAYQVRLGLVGDFQAWNAALAAG
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: VTGLSVDSREAAPGHLFAALPGTRVHGARFAGQALERGAAAVLTDPEGADLCGDAVADAGAALVVAEEPRAALARAA
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: GRMQLAATRENGAGVYVDYAHTPDAIATALRALRPHVMGRLVAVIGAGGDRDRAKRPLMGQAARAHADEVFVTDDNPRSEDPAAIRAEVLAGAPEAREVGDRAEAILRAVAGLGPGDAALIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MRIDVISLFPEFIAQCAAFGVVGRAQERGLLELQGWNPRDHAQGNYRRVDDRPFGGGPGMVMLIEPLRACLEAAKAADARPAPVIYLSPQGRPLTQPLARELAQLPRMVLLCGRYEGVDERFLDQAVDMEISIGDYVLSGGELGAAVLVDVVTRLQDGVLNDAESAAQDSFEGPQGLLDCPHYSHPSSHAWGDVPEVLRSGNHGAIARWRRQQSLGRTWLRRPELLDEATLDKQDRRLLEEFRRELAPGDEK

Annotated regions:
phrase: GRAQERGLLELQGWNPRDHAQGNYRRVDDRPFGGGPGMVMLIEPLRACLEAAKAADARPAPVIYLSPQGRPLTQPLARELAQLPRMVLLCGRYEGVDERFLDQAVDMEISIGDYVLSGGELGAAVLVDVVTRLQDGVLNDAESAAQDSFEGPQGLLDCPHYSHPSSHAWGDVPEVLRSGNHGAIARWRRQQSLGRTWLRR
type: DOMAIN
name: tRNA_MeTrfase_TRMD/TRM10
description: tRNA methyltransferase TRMD/TRM10-type domain
Protein sequence:
MSNFAVSLPEVIAVLPAAGIGSRMLVDCPKQYLTVGGKTIIEHAIFSLLHHPRIQRVIVVIHPQDTQFSRLSVAQDPRISTVYGGDQRANSVMAGLQLAGQAEWVLVHDAARPCLHLDDLSRLLSITECSQVGGILAAPVRDTMKRAEPGIQAIAHTVDRQDLWHALTPQLFPLELLKLCLSRALREGVAVTDEASALEHCGYHPILVTGRSDNIKVTRPEDLALAEFYLTQRQSLNNDSL

Annotated regions:
phrase: VLVHDAA
type: CONSERVED_SITE
name: ISPD_synthase_CS
description: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site
Protein sequence:
MFNVAVVGATGAVGEQIIGLLEKRDFPIAALKLLSSARSAGKKITFKGKEYTVEEATPESFKGVEIALFSAGGDVTRALAPHAVEHGAVCIDNTNAYRMDPDTPLVVPELNIDKVSEHRGIIANPNCSTIQLVAALKPIQVRYGISRIIVSTYQAVSGAGSRAIDELLRQTRAVLDGNDVNPELLPVGALPVKHQIAFNAIPQIDKFQENGYTLEEMKMVRETKKILDDESIDVTATCVRIPVVYGHSESVYVELQNDYELEDVKKLLAEAPGVVLADDPEGQLYPLATEAAGKPEVFVGRLRRDLGHARGLNLWIVSDNLLKGAAWNAVQIAEYIAIEKQ

Annotated regions:
phrase: LKPIQVRYGISRIIVSTYQAVSGAGSRAIDELLRQTRAVLDGNDVNPELLPVGALPVKHQIAFNAIPQIDKFQENGYTLEEMKMVRETKKILDDESIDVTATCVRIPVVYGHSESVYVELQNDYELEDVKKLLAEAPGVVLADDPEGQLYPLATEAAGKPEVFVGRLRRDLGHARGLNLWIVSDNLL
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: NVAVVGATGAVGEQIIGLLEKRDFPIAALKLLSSARSAGKKITFKGKEYTVEEATPESFKGVEIALFSAGGDVTRALAPHAVEHGAVCIDNTNAYRMDPDTPLVVPELNIDKVSE
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: NVAVVGATGAVGEQIIGLLEKRDFPIAALKLLSSARSAGKKITFKGKEYTVEEATPESFKGVEIALFSAGGDVTRALAPHAVEHGAVCIDNTNAYRMDPDTPLVVPELNIDKVS
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MATPGNLGSSVLASKTKTKKKHFVAQKVKLFRASDPLLSVLMWGVNHSINELSHVQIPVMLMPDDFKAYSKIKVDNHLFNKENMPSHFKFKEYCPMVFRNLRERFGIDDQDFQNSLTRSAPLPNDSXARSGARFHTSYDRRYVIKTITSEDVAEMHNILKNYHQHIVECHGITLLPQFLGMYRLNVDGVEIYVIVTRNVFSHRLSVYRKYDLKGSTVAREASDKEKAKELPTLKDNDFINEGQKIYIDDNXKKVFLEKLKKDVEFLAQLKLMDYSLLVGIHDVERAEQEEVECEENDGEEEGESDGTHPVGTPPDSPGNTLNSSPPLAPGEFDPNIDVYGIKCHENSPRKEVYFMAIIDILTHYDAKKKAAHAAKXVKHGAGAEISTVNPEQYSKRFLDFIGHILT

Annotated regions:
phrase: DSXARSGARFHTSYDRRYVIKTITSEDVAEMHNILKNYHQHIVECHGITLLPQFLGMYRLNVDGVEIYVIVTRNVFSHRLSVYRKYDLKGSTVAREASDKEKAKELPTLKDNDFINEGQKIYIDDNXKKVFLEKLKKDVEFLAQLKLMDYSLLVGIHDVERAEQEEVECEENDGEEEGESDGTHPVGTPPDSPGNTLNSSPPLAPGEFDPNIDVYGIKCHENSPRKEVYFMAIIDILTHYDAKKKAAHAAKXVKHGAGAEISTVNPEQYSKRFLDFIG
type: DOMAIN
name: PInositol-4-P-4/5-kinase_core
description: Phosphatidylinositol-4-phosphate 4/5-kinase, core

phrase: ASDPLLSVLMWGVNHSINELSHVQIPVMLMPDDFKAYSKIKVDNHLFNKENMPSHFKFKEYCPMVFRNLRERFGIDDQDFQNSLTRSAPLPNDSXARSGARFHTSYDRRYVIKTITSEDVAEMHNILKNYHQHIVECHGITLLPQFLGMYRLNVDGVEIYVIVTRNVFSHRLSVYRKYDLKGSTVAREASDKEKAKELPTLKDNDFINEGQKIYIDDNXKKVFLEKLKKDVEFLAQLKLMDYSLLVGIHDVERAEQEEVECEENDGEEEGESDGTHPVGTPPDSPGNTLNSSPPLAPGEFDPNIDVYGIKCHENSPRKEVYFMAIIDILTHYDAKKKAAHAAKXVKHGAGAEISTVNPEQYSKRFLDFIGHI
type: DOMAIN
name: PInositol-4-P-4/5-kinase_core
description: Phosphatidylinositol-4-phosphate 4/5-kinase, core

phrase: MPDDFKAYSKIKVDNHLFNKENMPSHFKFKEYCPMVFRNLRERFGIDDQDFQNSLTRSAPLPNDSXARSGARFHTSYDRRYVIKTITSEDVAEMHNILKNYHQHIVECHGITLLPQFLGMYRLNVDGVEIYVIVTRNVFSHRLSVYRKYDLKGSTVAREASDKEKAKELPTLKDNDFINEGQKIYIDDNXKKVFLEKLKKDVEFLAQLKLMDYSLLVGIHDVERAEQEEVECEENDGEEEGESDGTHPVGTPPDSPGNTLNSSPPLAPGEFDPNIDVYGIKCHENSPRKEVYFMAIIDILTHYDAKKKAAHAAKXVKHGAGAEISTVNPEQYSKRFLDFIGHIL
type: DOMAIN
name: PInositol-4-P-4/5-kinase_core
description: Phosphatidylinositol-4-phosphate 4/5-kinase, core
Protein sequence:
MAAQLEQFLVNEGQVDQRAVTYMLKGLQLESLSDFASFWTSKDYENGVRDDIISKVAPFNSDLSLPAAKLQVARLRAAWRKAQGKPSAAVPLQSAKPVAGSVVTATKDTGFCEKTGLESGGVAHGGALNAAQVAHLDEDAFKGGLHRPKFDSEGLHKPHTSGGKTYETGFHYLLEAHELGGKNADGGFGGPLCADPFSPEIEQLCQALVREAQDDKTLCFENFTKPCPQLTKKQVELCKGFDYGDKTLKLPCGPLPWPAGLPEPGYVPKTNPLHGRWITVSGGQAAFIKEAIKAGMLGAAESHKIMADTDHHQTGGMYLRINQNGDVCTVDASVAKFARAKRTWKSGHYFYEPLVSGGNLLGVWVLPEEYRKIGFFWEMESGRCFRIERRAFERNGLMIMRQATEVAGKISFVFYVKVSNDPESKPIPLQSRDYTALAGLDNVPDSLGNPYTCEAKDLDYPIKRDTWLDKNQEEMLKQRSIVGTAFAKCCDQGFEAHDNPKGGALTAAHVESLGKENFKNGLHAPNFHDDGLHKPMEAGGKVYSTGFHYLLEAHDLGGKNEDGGYGGPLCKDPYGKEVQSMVENLLVQANVDTTNAFDNFKQPCPQLTKEQVAMCKGFDYGDKTLKLPCGPLPWPAGLPEPGYVPKTNPLHGRWITVSGGQVAFIKEAIKSGMLGAAEAKKIIADTDHHQTGGMYLRINQYGEVCTVDASVAKFARAKRTWKSGHYFYEPLVSGGNLLGVWVLPEEYRKIGFFWEMESGHCFRIERRAFPCGPYMFLRQATEVGGKISYVFYVKVSNDPGSKPIPLQSRDYTALAGQDNAPDNLGKPYKCTARDLDAPTKRDGWLDTNKGAMLDQREKVSKAFAKVCEKGFEAGDNKLGGALNAKHVEKYGDNFKNGMHKPEFHEDGLHKPMEVGGKKFESGFHYLLECHELGGKNASGGYGGPLCEDPYGSEVQAMTEKLLKEADSDRTLCFNNFQDPCPQLTKEQVAMCKGFDYGDKTLKLPCGPLPWPAGLPEPGYVPKTNPLHGRWITVSGGQAAFIKEAIKSGMLGAAEANKIVADTDHHQTGGMYLRINQFGDVCTVDASVAKFARAKRTWKSGHYFYEPLVSGGNLLGVWVLPEEYRKIGFFWEMESGRCFRIERRAFPVGPYTFMRQATEVGGKISFVFYVKVSNDPESDPIPLQSRDYTALAGRDNAPTNLGKPYPTLAKDLDYPKKRDGWLEKNEKEMLRQRNIVSSTFRS

Annotated regions:
phrase: PLCEDPYGSEVQAMTEKLLKEADSDRTLCFNNFQDPCPQLTKEQVAMCKGFDYGDKTLKLPCGPLPWPAGLPEPGYVPKTNPLHGRWITVSGGQAAFIKEAIKSGMLGAAEANKIVADTDHHQTGGMYLRINQFGDVCTVDASVAKFARAKRTWKSGHYFYEPLVSGGNLLGVWVLPEEYRKIGFFWEMESGRCFRIERRAFPVGPYTFMRQATEVGGKISFVFYVKVSNDPESDPIPLQSRDYTALAGRDNAPTNLGKPYPTLAKDLDYPKKRDGWLEKNEKEMLRQRNIVSST
type: DOMAIN
name: Luciferase_cat
description: Luciferase catalytic domain

phrase: PLCKDPYGKEVQSMVENLLVQANVDTTNAFDNFKQPCPQLTKEQVAMCKGFDYGDKTLKLPCGPLPWPAGLPEPGYVPKTNPLHGRWITVSGGQVAFIKEAIKSGMLGAAEAKKIIADTDHHQTGGMYLRINQYGEVCTVDASVAKFARAKRTWKSGHYFYEPLVSGGNLLGVWVLPEEYRKIGFFWEMESGHCFRIERRAFPCGPYMFLRQATEVGGKISYVFYVKVSNDPGSKPIPLQSRDYTALAGQDNAPDNLGKPYKCTARDLDAPTKRDGWLDTNKGAMLDQREKVSKA
type: DOMAIN
name: Luciferase_cat
description: Luciferase catalytic domain

phrase: PLCADPFSPEIEQLCQALVREAQDDKTLCFENFTKPCPQLTKKQVELCKGFDYGDKTLKLPCGPLPWPAGLPEPGYVPKTNPLHGRWITVSGGQAAFIKEAIKAGMLGAAESHKIMADTDHHQTGGMYLRINQNGDVCTVDASVAKFARAKRTWKSGHYFYEPLVSGGNLLGVWVLPEEYRKIGFFWEMESGRCFRIERRAFERNGLMIMRQATEVAGKISFVFYVKVSNDPESKPIPLQSRDYTALAGLDNVPDSLGNPYTCEAKDLDYPIKRDTWLDKNQEEMLKQRSIVGTA
type: DOMAIN
name: Luciferase_cat
description: Luciferase catalytic domain

phrase: CEKTGLESGGVAHGGALNAAQVAHLDEDAFKGGLHRPKFDSEGLHKPHTSGGKTYETGFHYLLEAH
type: DOMAIN
name: Luciferase_hlx-bundle_domain
description: Luciferase, helical bundle domain

phrase: CEKGFEAGDNKLGGALNAKHVEKYGDNFKNGMHKPEFHEDGLHKPMEVGGKKFESGFHYLLECH
type: DOMAIN
name: Luciferase_hlx-bundle_domain
description: Luciferase, helical bundle domain

phrase: CDQGFEAHDNPKGGALTAAHVESLGKENFKNGLHAPNFHDDGLHKPMEAGGKVYSTGFHYLLEAH
type: DOMAIN
name: Luciferase_hlx-bundle_domain
description: Luciferase, helical bundle domain

phrase: MAAQLEQFLVNEGQVDQRAVTYMLKGLQLESLSDFASFWTSKDYENGVRDDIISKVAPFNSDLSLPAAKLQVARLRAAWRKA
type: DOMAIN
name: Dino_Luciferase_N
description: Dinoflagellate luciferase, N-terminal
Protein sequence:
MNRYHFVGIKGTGMSPLAQILFDMNNEVRGSDVEKAFFTEEALNRKGIEILPFDPENISEDQIVVQGNAFSDDHPEIVRARELGLTIYKYYEFLGELANHYTSVAITGSHGKTSTTGLLAHVMRGIEPTSFLIGDGTGEGVADSKNFVFEACEYKRHFLYYRPDYAIMTNIDFDHSDYFSGLDDVIDAFQEMAKQVKKGIIACGDDENLQQIQANVPLVYYGFGAHNDFRAEQVTSTENGTTFDVFLRDDFYGTFRIPGYGDHSVLNALAVIATCDYENLPKELVKERLETFNGVKRRFSESTLNDQVLVDDYAHHPREISATVEAARKKYGNREVVAIFQPHTYTRLKSFMDDFATALAEADTVYLCDIFGSAREQEGTVTIEDLQSRIEGAHILKRGGTGVLRNHADAVLLFMGAGDIQTYQREYEEVVKLEA

Annotated regions:
phrase: TLNDQVLVDDYAHHPREISATVEAARKKYGNREVVAIFQPHTYTRLKSFMDDFATALAEADTVYLCDIFGSAREQEGTVTIEDLQSRI
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: YHFVGIKGTGMSPLAQILFDMNNEVRGSDVEKAFFTEEALNRKGIEILPFDPENISEDQIVVQGNAFSDDHPEIVRARELGLTIYKYYEFLGELANH
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: ITGSHGKTSTTGLLAHVMRGIEPTSFLIGDGTGEGVADSKNFVFEACEYKRHFLYYRPDYAIMTNIDFDHSDYFSGLDDVIDAFQEMAKQVKKGIIACGDDENLQQIQANVPLVYYGFGAHNDFRAEQVTSTENGTTFDVFLRDDFYGTFRIPGYGDHSVLNALAVIA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central
Protein sequence:
MAIVKCKPTSPGRRHVVKVVNPELHKGKPYAPLLETLSKSGGRNNNGRITTRHIGGGHKQHYRLIDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDGERRYILAPKGLKAGEQIQSGVDAAIKAGNALPMRNIPVGSTVHNVEMKPGKGGQLARSAGAYVQIVARDGAYVTLRLRSGEMRKIQSECRATLGEVGNAEHMLRVLGKAGASRWRGIRPTVRGTAMNPVDHPHGGGEGRNFGKHPVTPWGIQTKGKKTRSNKRTDKFIVRRRSK

Annotated regions:
phrase: KAGNALPMRNIPVGSTVHNVEMKPGKGGQLARSAGAYVQIVARDGAYVTLRLRSGEMRKIQSECRATLGEVGNAEHMLRVLGKAGASRWRGIRPTVRGTAMNPVDHPHGGGEGRNFGKHPVTPW
type: DOMAIN
name: Ribosomal_uL2_C
description: Large ribosomal subunit protein uL2, C-terminal

phrase: GRNNNGRITTRHIGGGHKQHYRLIDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDGERRYILAPKGLKAGEQ
type: DOMAIN
name: Ribosomal_uL2_RNA-bd_dom
description: Large ribosomal subunit protein uL2, RNA-binding domain

phrase: PTVRGTAMNPV
type: CONSERVED_SITE
name: Ribosomal_uL2_CS
description: Large ribosomal subunit protein uL2, conserved site

phrase: IKAGNALPMRNIPVGSTVHNVEMKPGKGGQLARSAGAYVQIVARDGAYVTLRLRSGEMRKIQSECRATLGEVGNAEHMLRVLGKAGASRWRGIRPTVRGTAMNPVDHPHGGGEGRNFGKHPVTPWGI
type: DOMAIN
name: Ribosomal_uL2_C
description: Large ribosomal subunit protein uL2, C-terminal
Protein sequence:
MDVLAEEFGNLTPEQLAAPIPTVEEKWRLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMKANEKVTSDADPMWYLKYLNIYVGLPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYTRGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADRKGAVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMIGTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWGGGPKKTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNKVDDRDYYGNKRLELAGQLLSLLFEDLFKKFNSEMKKIADQVIPKQRAAQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALMTHITTDMEDGPIVKLASNLGVEDVNLLCGEELSYPNVFLVFLNGNILGVIRDHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIVKKQKPAVTNKHMEELAQGYRNFEDFLHESLVEYLDVNEENDCNIALYEHTINKDTTHLEIEPFTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQKPMVKTKTIELIEFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNAKCTLKRYTNQTFDKVMGPMLDAATRKPIWRHEILDADGICSPGEKVENKQVLVNKSMPTVTQIPLEGSNVPQQPQYKDVPITYKGATDSYIEKVMISSNAEDAFLIKMLLRQTRRPEIGDKFSSRHGQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGFPSRMTVGKLIELLAGKAGVLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLSKYNE

Annotated regions:
phrase: GGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCGQCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLK
type: DOMAIN
name: RNA_pol_Rpb2_7
description: RNA polymerase Rpb2, domain 7

phrase: GLVKQHIDSFNYFINVEIKKIMKANEKVTSDADPMWYLKYLNIYVGLPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYTRGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPAEFAKLNECPLDPGGYFIVKGVEKVILIQEQLSKNRIIVEADRKGAVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMIGTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWGGGPKKTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNKVDDRDYYGNKRLELAGQLLSLLFEDLFKKFNSEMKKIADQVIPKQRAAQFDVVKHMRQDQI
type: DOMAIN
name: RNA_pol_bsu_protrusion
description: RNA polymerase, beta subunit, protrusion

phrase: CAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQKPMVKTKTIELIEFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNAKCTLKRYTNQTFDKVMGPMLDAATRKPIWRHEILDADGICSPGEKVENKQVLVNKSMPTVTQIPLEGSNVPQQPQYKDVPITYKGATDSYIEKVMISSNAEDAFLIKMLLRQTRRPEIGDKFSSRHGQKGVCGLIVPQEDMPFCDSGICPDIIMNPHGFPSRMTVGKLIELLAGKAGVLDGRFHYGTAFGGSKVKDVCEDLVRHGYNYLGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRS
type: DOMAIN
name: DNA-dir_RNAP_su2_dom
description: DNA-directed RNA polymerase, subunit 2, hybrid-binding domain

phrase: KNRIIVEADRKGAVGASVTSSTHEKKSRTNMAVKQGRFYLRHNTLSEDIPIVIIFKAMGVESDQEIVQMIGTEEHVMAAFGPSLEECQKAQIFTQMQALKYIGNKVRRQRMWGGGPKKTKIEEARELLASTILTHVPVKEFNFRAKCIYTAVMVRRVILAQGDNKVDDRDYYGNKRL
type: DOMAIN
name: RNA_pol_Rpb2_2
description: RNA polymerase Rpb2, domain 2

phrase: VFLNGNILGVIRDHKKLVNTFRLMRRAGYINEFVSISTNLTDRCVYISSDGGRLCRPYIIV
type: DOMAIN
name: RNA_pol_Rpb2_4
description: RNA polymerase Rpb2, domain 4

phrase: FEDFLHESLVEYLDVNEENDCNIALYEHTINK
type: DOMAIN
name: RNA_pol_Rpb2_5
description: RNA polymerase Rpb2, domain 5

phrase: QVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCPSDTPEGEACGLVKNLALMTH
type: DOMAIN
name: RNA_pol_Rpb2_3
description: RNA polymerase Rpb2, domain 3

phrase: GDKFSSRHGQKG
type: CONSERVED_SITE
name: RNA_pol_bsu_CS
description: RNA polymerase, beta subunit, conserved site
Protein sequence:
MSRIGKKPVELPTGVTASVSGQTIEVKGPKATRSFTATDDVTLKVEDNVITIEPRGKSKRARQQWGMSRTMVGNLVTGVTNGFKKELEIQGVGYRAQMQGNTLKLNLGLSHEVNYEVPAGVTVTCPKVTEIVIEGTDEQLVGQVAANIRDWRKPEPYKGKGIRYKGEFIFRKEGKKK

Annotated regions:
phrase: PEPYKGKG
type: CONSERVED_SITE
name: Ribosomal_uL6_CS
description: Large ribosomal subunit protein uL6, conserved site

phrase: GVGYRAQMQGNTLKLNLGLSHEVNYEVPAGVTVTCPKVTEIVIEGTDEQLVGQVAANIRDWRKPEPYKGKGIR
type: DOMAIN
name: Ribosomal_uL6_a/b-dom
description: Large ribosomal subunit protein uL6, alpha-beta domain

phrase: PTGVTASVSGQTIEVKGPKATRSFTATDDVTLKVEDNVITIEPRGKSKRARQQWGMSRTMVGNLVTGVTN
type: DOMAIN
name: Ribosomal_uL6_a/b-dom
description: Large ribosomal subunit protein uL6, alpha-beta domain
Protein sequence:
MKNEKRKTGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVFSYVTNVWGWAFEWYMVVMLFGWFWLVFGPYAKKRLGNEPPEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISTPPFGLEPNSTGAKELGLAYSLFHWGPLPWATYSFLSVAFAYFFFVRKMEVIRPSSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTECMQWLFGIPHTLQLDAIIITCWIILHAICVACGLQKGGRIPSDVRSYLSFLMLGWVFIVSGASFIMNYFTDSVGMLLMYLPRMLFYTDPIAKGGFPQGWTVFYWAWWVIYAIQMSIFLARISRGRTVRELCFGMVMGLTASTWILWTVLGSNTLLLMDKNIINIPNLIEQYGVARAIIETWAALPLSTATMWGFFILCFIATVTLVNACSYTLAMSTCREVRDGEEPPLLVRIGWSILVGIIGIVLLALGGLKPIQTAIIAGGCPLFFVNIMVTLSFIKDAKQNWKD

Annotated regions:
phrase: GWTVFYWAW
type: CONSERVED_SITE
name: BCCT_CS
description: BCCT transporter, conserved site
Protein sequence:
MLNEFIYPDKIFWEEKTDTYGRLVVEPLERGFGTTVGNSLRRVLLSSISGTAITAVKIYGIYHEFSAIEGVQEDAIELIANLKKIKFLMKGDSDVEILYLQKKGEGEVKASDIKTPPNVEILNPDQYIATITDPNKELNIEIRVERGRGYVPVEEMEAIGEVGWILVDADFSPVKKVGFRVDNVRVGKKSTYERLTLEIFTNGIKTPDQCMQEAIEILKKHYELLENIFTEKPTVPQKVAVDELAEKLSLSIEELDISQRALNSLKRIGITTIGDLVRMTEDELKSTKNIGRKALAEIKEALHKLGLELGMNIETQR

Annotated regions:
phrase: EPLERGFGTTVGNSLRRVLLSSISGTAITAVKIYGIYHEFSAIEGVQEDAIELIANLKKIKFLMKGDSDVEILYLQKKGEGEVKASDIKTPPNVEILNPDQYIATITDPNKELNIEIRVERGRGYVPVEEMEAIGEVGWILVDADFSPVKKVGFRVDNVRVGKKSTYERLTLEIFTNGIKTPDQCMQEAIEILKK
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: LAEKLSLSIEELDISQRALNSLKRIGITTIGDLVRMTEDELKSTKNIGRKALAEIKEAL
type: DOMAIN
name: RNAP_asu_C
description: RNA polymerase, alpha subunit, C-terminal

phrase: VKIYGIYHEFSAIEGVQEDAIELIANLKKIKFLMKGDSDVEILYLQKKGEGEVKASDIKTPPNVEILNPDQYIATITDPNKELNIEIRVERGRGYVPVEEMEAIGEVGWILVDADF
type: DOMAIN
name: DNA-dir_RNA_pol_insert
description: DNA-directed RNA polymerase, insert domain

phrase: YGRLVVEPLERGFGTTVGNSLRRVLLSSISGTAITAVKIYGIYHEFSAIEGVQEDAIELIANLKKIKFLMKGDSDVEILYLQKKGEGEVKASDIKTPPNVEILNPDQYIATITDPNKELNIEIRVERGRGYVPVEEMEAIGEVGWILVDADFSPVKKVGFRVDNVRVGKKSTYERLTLEIFTNGIKTPDQCMQEAIEILKKHYELLEN
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type