nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MARYTGPSWKLSRRLGISLSGTGKELEKRPYAPGPHGPGQRKKLSEYGLQLQEKQKLRHMYGVNERQFRTLFDKAGKLAGKHGENFMILLDSRLDNVVYKLGLARTRRQARQLVNHGHILVDGSRVDIPSYLVKPGQTIGVREKSRNLSIIKESVEVNNFVPEYLTFDAEKLEGTFTRLPERSELAPEINEALIVEFYSR

Annotated regions:
phrase: RYTGPSWKLSRRLGISLSGTGKELEKRPYAPGPHGPGQRKKLSEYGLQLQEKQKLRHMYGVNERQFRTLFDKAGKLAGKHGENFMIL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: RLDNVVYKLGLARTRRQARQLVNHGHILVDGSRVDIPSYLVKPGQT
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: RYTGPSWKLSRRLGISLSGTGKELEKRPYAPGPHGPGQRKKLSEYGLQLQEKQKLRHMYGVNERQFRTLFDKAGKLAGKHGENFMILL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: SRLDNVVYKLGLARTRRQARQLVNHGHILVDGSRVDIPSYLVKPGQTIGVREKSRNLSIIKESV
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: LDSRLDNVVYKLGLARTRRQARQL
type: CONSERVED_SITE
name: Ribosomal_uS4_CS
description: Small ribosomal subunit protein uS4, conserved site
Protein sequence:
MRVGIKVLGCPKNEADCEVLAGVLREGGHEIVFDVKDADVVVLDTCAFIEDAKRESIDEIFSFVDAKDQYGYKLVVKGCLVQRYYEELKKEVPEVDQWIGVADPEEIANAIENGTDLVPDQPETVYRYRKRIDLEERPYAYVKISDGCDRGCTFCSIPSFKGSLRSRSIEDITREVEDLLKEGKKEIILVAQDTTSYGIDLYRKQALPDLLRRLNSLNGEFWIRVMYLHPDHLTEEIISAMLELDKVVKYFDVPVQHGSDKILKLMGRTKSSEELKKMLSSIRERFPDAVLRTSIIVGFPGETEEDFEELKQFVEEIQFDKLGAFVYSDEEGTVAFNLKEKVDPEMAKRRQEELLLLQAEISNSRLDRFVGKKLKFLVEGKEGKFLVGRTWTEAPEVDGVVFVRGKGKIGDFLEVVIKEHDEYDMWGSVI

Annotated regions:
phrase: PYAYVKISDGCDRGCTFCSIPSFKGSLRSRSIEDITREVEDLLKEGKKEIILVAQDTTSYGIDLYRKQALPDLLRRLNSLNGEFWIRVMYLHPDHLTEEIISAMLELDKVVKYFDVPVQHGSDKILKLMGRTKSSEELKKMLSSIRERFPDAVLRTSIIVGFPGETEEDFEELKQFVEEIQFDKLGAFVYSDEEGTVAFNLKEKVDPEMAKRRQEELLLL
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: RVGIKVLGCPKNEADCEVLAGVLREGGHEIVFDVKDADVVVLDTCAFIEDAKRESIDEIFSFVDAKDQYGYKLVVKGCLVQRYYEELKKEVPEVDQWIGVADPEEIANAIENGTDLVPDQPETVYRYRKRIDLEERPYAYVKISDGCDRGCTFCSIPSFKGSLRSRSIEDITREVEDLLKEGKKEIILVAQDTTSYGIDLYRKQALPDLLRRLNSLNGEFWIRVMYLHPDHLTEEIISAMLELDKVVKYFDVPVQHGSDKILKLMGRTKSSEELKKMLSSIRERFPDAVLRTSIIVGFPGETEEDFEELKQFVEEIQFDKLGAFVYSDEEGTVAFNLKEKVDPEMAKRRQEELLLLQAEISNSRLDRFVGKKLKFLVEGKEGKFLVGRTWTEAPEVDGVVFVRGKGKIGDFLEVVIKEHDEYDMWGS
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: DRFVGKKLKFLVEGKEGKFLVGRTWTEAPEVDGVVFVRGKGKIGDFLEVVIKEHDEYDMWGSV
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: LEERPYAYVKISDGCDRGCTFCSIPSFKGSLRSRSIEDITREVEDLLKEGKKEIILVAQDTTSYGIDLYRKQALPDLLRRLNSLNGEFWIRVMYLHPDHLTEEIISAMLELDKVVKYFDVPVQHGSDKILKLMGRTKSSEELKKMLSSIRERFPDAVLRTSIIVGFPGETEEDFEELKQFVEEIQFDKLGAFVYSDEEGTVAFNLKEKVDPEMAKRRQEELLLLQAEISNS
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: RVGIKVLGCPKNEADCEVLAGVLREGGHEIVFDVKDADVVVLDTCAFIEDAKRESIDEIFSFVDAKDQYGYKLVVKGCLVQRYYEELKKEVPEVDQWI
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: MRVGIKVLGCPKNEADCEVLAGVLREGGHEIVFDVKDADVVVLDTCAFIEDAKRESIDEIFSFVDAKDQYGYKLVVKGCLVQRYYEELKKEVPEVDQWIGVADPEEIANAIENGT
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: VKISDGCDRGCTFCSIPSFK
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: VGKKLKFLVEGKEGKFLVGRTWTEAPEVDGVVFVRGKGKIGDFLEVVIKEHDEYDMWGSV
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: KISDGCDRGCTFCSIPSFKGSLRSRSIEDITREVEDLLKEGKKEIILVAQDTTSYGIDLYRKQALPDLLRRLNSLNGEFWIRVMYLHPDHLTEEIISAMLELDKVVKYFDVPVQHGSDKILKLMGRTKSSEELKKMLSSIRERFPDAVLRTSIIVGFPGETEEDFEELKQF
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MAASGGSGGKATELLRCLPRVTLANLRPNPGARHREKRRGRGIHGGRKSGRGHKGETQRGNQPRLGFEGGQTPFYLVIPKYGYNEGHSFRRQYQPLSLNRLQYLIDLGRIDPTQPIDLTQLVNARGVTIQPLKRDYGVQLVEEGADLFAAKVNIEVQWASQLAIAAIEKNGGLITTGFYDPRSLDVLCKPVPFFMRGQPIPKRMLPPEDLVKYYTDAENRGYLADPRNVLEARKQLARKYGYVLPDITKDELYQMLSTRKDPRQIFFGLAPGWIVNMPEKKILKPTDERLLSYYSS

Annotated regions:
phrase: PLSLNRLQYLIDLGRIDPTQPIDLTQLVNARGVTIQPLKRDYGVQLVEEGADLFAAKVNIEVQWASQLAIAAIEKNGGL
type: DOMAIN
name: Ribosomal_uL15/eL18
description: Large ribosomal subunit protein uL15/eL18
Protein sequence:
MGNSNSKSVKNDKENFEDPNATNFESVSQFKIRNVIGKGSWSTVFVVKHRQTKQRFALKCINKKKHDEHKIKKLRNEVLLLQSLNHPLLCKFYSEFEDETKIYLVTDLMLGGDLRYHISQRKFNESVIRIWMVELVSALIYIHSKGVLHRDVKPDNILLDEKGHCKLADFNVAAKVHTSSSPSKSNMTVGRVGTPVYMAPETLIHAVSYKESDWWSLGITFYECLFQVRPFPNHLLINWIRASEEEKASSADRLSSALHISRDKKLTTISKDARSAVMAFLEMDIKKRLGHSSKKLQTHPFFCSISLETVSKGNLTPIFRPKSGKVYVDPILDLEATF

Annotated regions:
phrase: VLHRDVKPDNIL
type: ACTIVE_SITE
name: Ser/Thr_kinase_AS
description: Serine/threonine-protein kinase, active site

phrase: KIRNVIGKGSWSTVFVVKHRQTKQRFALKCINKKKHDEHKIKKLRNEVLLLQSLNHPLLCKFYSEFEDETKIYLVTDLMLGGDLRYHISQRKFNESVIRIWMVELVSALIYIHSKGVLHRDVKPDNILLDEKGHCKLADFNVAAKVHTSSSPSKSNMTVGRVGTPVYMAPETLIHAVSYKESDWWSLGITFYECLFQVRPFPNHLLINWIRASEEEKASSADRLSSALHISRDKKLTTISKDARSAVMAFLEMDIKKRLGHSSKKLQTHPF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: FKIRNVIGKGSWSTVFVVKHRQTKQRFALKCINKKKHDEHKIKKLRNEVLLLQSLNHPLLCKFYSEFEDETKIYLVTDLMLGGDLRYHISQRKFNESVIRIWMVELVSALIYIHSKGVLHRDVKPDNILLDEKGHCKLADFNVAAKVHTSSSPSKSNMTVGRVGTPVYMAPETLIHAVSYKESDWWSLGITFYECLFQVRPFPNHLLINWIRASEEEKASSADRLSSALHISRDKKLTTISKDARSAVMAFLEMDIKKRLGHSSKKLQTHPF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: FKIRNVIGKGSWSTVFVVKHRQTKQRFALKCINKKKHDEHKIKKLRNEVLLLQSLNHPLLCKFYSEFEDETKIYLVTDLMLGGDLRYHISQRKFNESVIRIWMVELVSALIYIHSKGVLHRDVKPDNILLDEKGHCKLADFNVAAKVHTSSSPSKSNMTVGRVGTPVYMAPETLIHAVSYKESDWWSLGITFYECLFQVRPFPNHLLINWIRASEEEKASSADRLSSALHISRDKKLTTISKDARSAVMAFLEMDIKKRLGHSSKKLQTHPF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: IGKGSWSTVFVVKHRQTKQRFAL
type: BINDING_SITE
name: Protein_kinase_ATP_BS
description: Protein kinase, ATP binding site
Protein sequence:
MNVKKLIKSPVTVILLIGLMLIVGFSLFSSLAAAKQISTQEGLELLKGDSVVEVTTTDGDQRVDMKLSKEFDGAKDVQFYYNSARADEVIAAINASDPKDGFNDVVPRPSFLDGLLSLMIPILLLGLLFWFLMSSAQGGGGKIMQFGKSRAKLVSKESPTVTFDDVAGADEAIEELDEIKDFLQDPAKFQAVGAKIPKGVLLYGPPGTGKTLLARAVAGEAGVPFYSISGSDFVEMFVGVGASRVRDLFTQAKESAPAIIFIDEIDAVGRHRGAGMGGGHDEREQTLNQMLVEMDGFDPKQNVIVIAATNRPDILDPALLRPGRFDRQIGVDAPDLKGRLKILEVHGRGKPLADSVDLEVVARKTPGFTGADLANVLNEAALLTARSNAQLIDNRALDEAIDRGIAGPQRRSRVMKDREKLITAYHEGGHALAAAAMNFTDPVTKVTILPRGKALGYTMVLPVDDKYSVTRNELQDQLTYAMGGRVAEEIVFHDPTTGASNDIEKATNIARKMVTEYGMTTEVGPVKLGSASGEVFMGRDMGHGREYSERVAERVDAEVRALIERAHDEAYAVLNDNREILDLLAAELLDKETLDHLQLEEIFKNVRKIAVREQWLSSDDRPVSTLPPVEVPTKVVPVESAVEFADAEPAAVEDEADHSPEAAVETEEALEIAEAPLLTEAAAEVPHAAGEAADEAALAEPAEVVVEDVTVVEAPPVPTLPDAPVVPPRPDVPPLPDEPKK

Annotated regions:
phrase: SVDLEVVARKTPGFTGADLANVLNEAALLTARSNAQLIDNRAL
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: RVMKDREKLITAYHEGGHALAAAAMNFTDPVTKVTILPRGKALGYTMVLPVDDKYSVTRNELQDQLTYAMGGRVAEEIVFHDPTTGASNDIEKATNIARKMVTEYGMTTEVGPVKLGSASGEVFMGRDMGHGREYSERVAERVDAEVRALIERAHDEAYAVLNDNREILDLLAAELLDKETLDHLQLEE
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: VIVIAATNRPDILDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: IPKGVLLYGPPGTGKTLLARAVAGEAGVPFYSISGSDFVEMFVGVGASRVRDLFTQAKESAPAIIFIDEIDAVGRHRGAGMGGGHDEREQTLNQMLVEMDGFDPKQNVIVIAATNRPDILDPALLRPGRFDRQIGVDAP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VLLYGPPGTGKTLLARAVAGEAGVPFYSISGSDFVEMFVGVGASRVRDLFTQAKESAPAIIFIDEIDAVGRHRGAGMGGGHDEREQTLNQMLVEMDGFDPKQNVIVIAATNRPDILDPALLRPGRFDRQIGV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core
Protein sequence:
MALRLAERLSLEEDSVGGGNLVFSPLSIYSALTVVTAGARGTTLAELLAALGAPSSRDALAEDAGEIVRALPGGSGTATGGPRVAHACGLWHDRRRNVKPAFRDAAAASFQATTRAVDFLANPEEARNEINSWVAAATENLIDTILPPGSVSTDTRLVVASAIYFNATWQTPFRKQDTKKDKFHILGGGGDVDADFMRSGDDQYVAAYDGFKVLKMPYNTRASRTHTQPQYSLCVFLPDKRNGLWTLADRMEAGGGEVFLREHMPEKRVKVGEFRIPRFKLSFDGSIKTALQGVGVRAVFDPAAADLSDVLEEGNSGDPPLFVSDVLHGAAIEVNEEGTEVAAATVVIMKGRARRPSPAPAPVDFVADHPFAFFVVEESSGAVLFAGHVVDPTNPSQL

Annotated regions:
phrase: LRLAERLSLEEDSVGGGNLVFSPLSIYSALTVVTAGARGTTLAELLAALGAPSSRDALAEDAGEIVRALPGGSGTATGGPRVAHACGLWHDRRRNVKPAFRDAAAASFQATTRAVDFLANPEEARNEINSWVAAATENLIDTILPPGSVSTDTRLVVASAIYFNATWQTPFRKQDTKKDKFHILGGGGDVDADFMRSGDDQYVAAYDGFKVLKMPYNTRASRTHTQPQYSLCVFLPDKRNGLWTLADRMEAGGGEVFLREHMPEKRVKVGEFRIPRFKLSFDGSIKTALQGVGVRAVFDPAAADLSDVLEEGNSGDPPLFVSDVLHGAAIEVNEEGTEVAAATVVIMKGRARRPSPAPAPVDFVADHPFAFFVVEESSGAVLFAGHVVD
type: DOMAIN
name: Serpin_dom
description: Serpin domain

phrase: ALRLAERLSLEEDSVGGGNLVFSPLSIYSALTVVTAGARGTTLAELLAALGAPSSRDALAEDAGEIVRALPGGSGTATGGPRVAHACGLWHDRRRNVKPAFRDAAAASFQATTRAVDFLANPEEARNEINSWVAAATENLIDTILPPGSVSTDTRLVVASAIYFNATWQTPFRKQDTKKDKFHILGGGGDVDADFMRSGDDQYVAAYDGFKVLKMPYNTRASRTHTQPQYSLCVFLPDKRNGLWTLADRMEAGGGEVFLREHMPEKRVKVGEFRIPRFKLSFDGSIKTALQGVGVRAVFDPAAADLSDVLEEGNSGDPPLFVSDVLHGAAIEVNEEGTEVAAATVVIMKGRARRPSPAPAPVDFVADHPFAFFVVEESSGAVLFAGHVVD
type: DOMAIN
name: Serpin_dom
description: Serpin domain
Protein sequence:
MFKFDNLILASSSKQRLCLLNQLGVLPGEIVIPNIDESPLKKELPKIYSMRVAKEKVIKVSLLYPKKFILGADTVVCCGRKILPKAETEDQAFEILELISGRRHRVYTSVYLYAPSKKLHYRSVMTVVKIKRLSVKEINSYILSGEWKGKAGACNIQGNAGKFVISINGSYSSVIGLPLYETYSILSQYFPI

Annotated regions:
Protein sequence:
MYRIGNGIDFHKLEINLNRPLILGGIECESEFALVGHSDADIILHAISDAILGALALGDIGQYFPDTDPSLKNIDSKIILVKCLELMKEKNFDLVNIDCTVIGERPKIAPLKDRITKSLSNLLNLPLDCISVKATTTEKMGALGRQEGIGTFCSILLEKRS

Annotated regions:
phrase: RIGNGIDFHKLEINLNRPLILGGIECESEFALVGHSDADIILHAISDAILGALALGDIGQYFPDTDPSLKNIDSKIILVKCLELMKEKNFDLVNIDCTVIGERPKIAPLKDRITKSLSNLLNLPLDCISVKATTTEKMGALGRQEGIGTFCSIL
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RIGNGIDFHKLEINLNRPLILGGIECESEFALVGHSDADIILHAISDAILGALALGDIGQYFPDTDPSLKNIDSKIILVKCLELMKEKNFDLVNIDCTVIGERPKIAPLKDRITKSLSNLLNLPLDCISVKATTTEKMGALGRQEGIGTFCSILLE
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: YRIGNGIDFHKLEINLNRPLILGGIECESEFALVGHSDADIILHAISDAILGALALGDIGQYFPDTDPSLKNIDSKIILVKCLELMKEKNFDLVNIDCTVIGERPKIAPLKDRITKSLSNLLNLPLDCISVKATTTEKMGALGRQEGIGTFCSILLE
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: SDADIILHAISDAIL
type: CONSERVED_SITE
name: MECDP_synthase_CS
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site

phrase: YRIGNGIDFHKLEINLNRPLILGGIECESEFALVGHSDADIILHAISDAILGALALGDIGQYFPDTDPSLKNIDSKIILVKCLELMKEKNFDLVNIDCTVIGERPKIAPLKDRITKSLSNLLNLPLDCISVKATTTEKMGALGRQEGIGTFCSILLE
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: YRIGNGIDFHKLEINLNRPLILGGIECESEFALVGHSDADIILHAISDAILGALALGDIGQYFPDTDPSLKNIDSKIILVKCLELMKEKNFDLVNIDCTVIGERPKIAPLKDRITKSLSNLLNLPLDCISVKATTTEKMGALGRQEGIGTFCSIL
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Protein sequence:
MSDDDSQDDSVPEGDPRRYATDFHAPVLSHDVQARLVTDASGRYVDATLGGGGHARALLDVLDPDGVVLGIDRDPEALETARDRLADEREAGRFWAVHGTFGNLRDVLAAEDLIPIDGLLLDLGVSSHQIDVPERGFSFRDEGPLDMRMDPQRGLTAQQVVNGWGERDLRDVLREYGEESRAGQIARALCDARPLDTTRALAEVVEDCAPPPDTVKTLTRVFQALRIVVNAELDELEQVLEQATEVVRTGGRIAAISYHSLEDRRVKRYLRYGNFEGEPRRDLYGTLVAPWAETPRGPIEAGESEVEANPRARSAHLRVAERRDDDEAGAPLPPLS

Annotated regions:
Protein sequence:
MEDCCMLPYYTAQSSPAMGMFNTSMGKLQRQLYKGEYTIFRYAPMFESDFIQISKRGEVIDVHNRARMVTMGIVRTSPCLTLPDVMLLARPAAVCDNARCGPATQKRESPPAEILELTRLLPLMFVKITIHNSVKKQLHLKLATGRSFYLQLCPPSDASEDLFVHWENLVYILRPPVEAYSDTRAILAGNTLDSSVLEEVQRSPVGYAMKFCEEKEQFRISRLHMNAEMFGSTYCDYTIEI

Annotated regions:
phrase: LELTRLLPLMFVKITIHNSVKKQLHLKLATGRSFYLQLCPPSDASEDLFVHWENLVYILRPPVEAYSD
type: DOMAIN
name: GARIL-like_Rab2B-bd
description: Golgi associated RAB2 interactor protein-like, Rab2B-binding domain
Protein sequence:
MSNVIAELGNATKRTDLPDFRSGDTVKVHVKVVEGNRSRVQIFQGVVIRLQGSGVGRSFTVRKVSFGVGVERTFPLHSPIFEQIEVVTRGDVRRAKLYYLRNLRGKKAKIKERREA

Annotated regions:
phrase: VVTRGDVRRAKLYYL
type: CONSERVED_SITE
name: Ribosomal_bL19_CS
description: Large ribosomal subunit protein bL19, conserved site
Protein sequence:
MPIKIPADLPAYDVLTREGVMVMDPDQAARQDIRPLRIGLLNLMPKKIQTENQFARLIGATPLQIELSLIRMSEHQTKNTAAEHMESFYRPFQDIKSEKFDGLIITGAPIEHLDFQDVTYWDELREVMDWTQTNVHSTFGVCWGGMAMINHFHGVRKHMLEAKAFGCFRHRNLAPASPYLRGFSDECVIPVSRWTEMRQSEIDAAEGLKTLLGSDQVGPCLVQDKAHRALYIFNHFEYDSETLKQEYDRDVAAGNQINVPLNYYPDDDPSRAPLNRWRSHAHLLYGNWLTEIYQDTPYDIDAIGR

Annotated regions:
Protein sequence:
MIDRYKHQQLRIGSVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPITKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREISTGAGAIREQLADLDLRIIIENSLVEWEELGEEGHTGNEWEDRKVGRRKDFLVRRVELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQVEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTSGNHRGICVNRYNPCNRRNYQNQKRSDNSHYKYTKEPFFSNSYDAIGAYRQKRINLDSPLWLRWRLDQRVIASRETPIEVHYESLGTFYEIYGHYLIVRSLKKQILFIYIRTTVGHIALYREIEEAIQGFSRAYSSGT

Annotated regions:
phrase: GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLAS
type: DOMAIN
name: RNA_pol_asu
description: RNA polymerase, alpha subunit

phrase: KEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQVEARLL
type: DOMAIN
name: RNA_pol_asu
description: RNA polymerase, alpha subunit

phrase: QLRIGSVSPQQISAWATKILPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGDEKEDPKFCEQCGVEFVDSRIRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPITKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREISTGAGAIREQLADLDLRIIIENSLVEWEELGEEGHTGNEWEDRKVGRRKDFLVRRVELAKHFIRTNIEPEWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRET
type: DOMAIN
name: RNA_pol_Rpb1_1
description: RNA polymerase Rpb1, domain 1

phrase: EWMVLCLLPVLPPELRPIIQIDGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPVLVEGRAICLHPLVCKGFNADFDGDQMAVHVPLSLEAQVEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVL
type: DOMAIN
name: RNA_pol_N
description: RNA polymerase, N-terminal
Protein sequence:
MADTLNHLPEPQKGEDLYRYLLERVTNLEDRNTELREQLRQIEADKRYLETQKVRYEREVRKFKGEIEQMKSPPLVIGTVTDLIDENRVIVRSSAGPRFLVGISQSLNIEEIKPGARCTLNQQSLAIVEILPTNYDAQIYGMEVIEAPSERYEEIGGLEKQINEIREAVELPLKKPEVFRKMGIEPPKGVLLHGPPGTGKTLLARAVAHQTEAHFLRVVGSELVQKYIGEGARLVRELFELAKKKSPSIIFIDEIDAIGASRTESNTSGDREVHRTLMQLLAEMDGFSNRGDVRIIGATNRIDILDRALLRPGRFDRIIEIPAPDIEGRVSILNIHCAGMNIDKKVDIRDIATRTDGKNGADLRSICMEAGMFAIRSDHEMVTLEDFEQSIEKFSNDFERDSLINTSGAMFA

Annotated regions:
phrase: VRIIGATNRIDILDRALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: VDIRDIATRTDGKNGADLRSICMEAGMFAIRSDHEMVTLEDFE
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: VLLHGPPGTGKTLLARAVAHQTEAHFLRVVGSELVQKYIGEGARLVRELFELAKKKSPSIIFIDEIDAIGASRTESNTSGDREVHRTLMQLLAEMDGFSNRGDVRIIGATNRIDILDRALLRPGRFDRIIEI
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: IGTVTDLIDENRVIVRSSAGPRFLVGISQSLNIEEIKPGARCTLNQQSLAIVEIL
type: DOMAIN
name: Prot_ATP_ID_OB_2nd
description: Proteasomal ATPase, second OB domain

phrase: PPKGVLLHGPPGTGKTLLARAVAHQTEAHFLRVVGSELVQKYIGEGARLVRELFELAKKKSPSIIFIDEIDAIGASRTESNTSGDREVHRTLMQLLAEMDGFSNRGDVRIIGATNRIDILDRALLRPGRFDRIIEIPAP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain
Protein sequence:
MTNFYKVFLAVFILVCCNISQAAVSFIGSTENDVGPSLGSYSRTHAMDNLPFVYDTRNKIGYQNANVWHISKGFCVGLDGKVDLPVVGSLDGQSIYGLTEEVGLLIWMGDTKYSRGTAMSGNSWENVFSGWCVGANTASTQGLSVRVTPVILKRNSSARYSVQKTSIGSIRMRPYNGSSAGSVQTTVNFSLNPFTLNDTVTSCRLLTPSAVNVSLAAISAGQLPSSGDEVVAGTTSLKLQCDAGVTVWATLTDATTPSNRSDILTLTGASTATGVGLRIYKNTDSTPLKFGPDSPVKGNENQWQLSTGTETSPSVRLYVKYVNTGEGINPGTVNGISTFTFSYQ

Annotated regions:
phrase: TSCRLLTPSAVNVSLAAISAGQLPSSGDEVVAGTTSLKLQCDAGVTVWATLTDATTPSNRSDILTLTGASTATGVGLRIYKNTDSTPLKFGPDSPVKGNENQWQLSTGTETSPSVRLYVKYVNTGEGINPGTVNGISTFTFSY
type: DOMAIN
name: Adhesion_dom_fimbrial
description: Fimbrial-type adhesion domain

phrase: VSFIGSTENDVGPSLGSYSRTHAMDNLPFVYDTRNKIGYQNANVWHISKGFCVGLDGKVDLPVVGSLDGQSIYGLTEEVGLLIWMGDTKYSRGTAMSGNSWENVFSGWCVGANTASTQGLSVRVTPVILKRNSSARYSVQKTSIGSIRMRPYNGSSAGSVQTTVNFSLNP
type: DOMAIN
name: Fimbrial_adhesin_lectin_dom
description: Fimbrial adhesin F17-AG, lectin domain
Protein sequence:
MARRLTSGALVVASHNAGKVAEIGALIAPLGLEVLGAASLGLAEPDETGNDFIANAELKARAAAGAMSLPALADDSGLCVAALAGAPGILSARWAGEGRGFGLAMDRVHDEMTETGNPDTGARFVCALALCWPDGQCQTVQGEVLGRITWPPRGGNGFGYDPMFIARGESLTFGEMDAAAKHAISHRADAFAKLVARCLGPA

Annotated regions:
Protein sequence:
MMSRKRWLALIAAAMLFVASAAISLVSSPAVDVDEWVGTGTSYKQTIVETGTDFGKSIAILELSGVIQDTGSAPSLLNTGVYHHRDFLKQLEKAGEDPNIAGIILQVNTPGGGVLESAEIHKQVEEIVQDSEKPVYVSMGNMAASGGYYISAPATKIYAHPQTITGSIGVIMQSIDISGLAENLGIEFNTFKSGPYKDILSQTREVTDEEEDILQTLVDEMYDEFVRVIVDGRGMSETEVRELADGRIYTGSQAVATGLVDELGGLDDVIESMKEDLGADYNVIRYEHSLGLYDFFSMSTNRLLSPSYELQSIERLLNQSNTPTLQYLYAE

Annotated regions:
phrase: IAILELSGVIQDTGSAPSLLNTGVYHHRDFLKQLEKAGEDPNIAGIILQVNTPGGGVLESAEIHKQVEEIVQDSEKPVYVSMGNMAASGGYYISAPATKIYAHPQTITGSIGVIMQSIDISGLAENLGIEFNTFKSGPYKDILSQTREVTDEEEDILQTLVDEMYDEFVRVIVDGRGMSETEVRELADGRIYTGSQAVATGLVDELGGLDDVIESMKE
type: DOMAIN
name: Pept_S49_SppA
description: Peptidase S49, SppA

phrase: QDSEKPVYVSMGNMAASGGYYISAPATKIYAHPQTITGSIGVIMQSIDISGLAENLGIEFNTFKSGPYKDILSQTREVTDEEEDILQTLVDEMYDEFVRVIVDGRGMSETEVRELADGRIYTGSQAVATGLVDELGGLDDVIESMKEDL
type: DOMAIN
name: Peptidase_S49
description: Peptidase S49

phrase: IAILELSGVIQDTGSAPSLLNTGVYHHRDFLKQLEKAGEDPNIAGIILQVNTPGGGVLESAEIHKQVEEIVQDSEKPVYVSMGNMAASGGYYISAPATKIYAHPQTITGSIGVIMQSIDISGLAENLGIEFNTFKSGPYKDILSQTREVTDEEEDILQTLVDEMYDEFVRVIVDGRGMSETEVRELADGRIYTGSQAVATGLVDELGGLDDVIESM
type: DOMAIN
name: S49_SppA_C
description: Signal peptide peptidase A-like, C-terminal
Protein sequence:
MKSILNDFLLMIQFFTRIPVNKNLQCEKENFKRGAFFLPVVAFIIGGMEFLIYLGLKNFLPANVIIVLLILFTAMITGGLHMDGLADTCDGFFSLRDKERIIEIMKDSRIGSYGTIALIIDLLLKYQLLYSLVLKGYSIAIVLAPIIGRISILFLCLSKRTAKKNGSGNIFIGNMSKPIIFFITTIVLVLSTYFLGLRATIIPFIGVLLITYLLYLLCLNKINGLTGDTLGACNELGEITFLLILLMM

Annotated regions:
Protein sequence:
MHNAPESVLNALVPMVVEQTAKGERSYDIYSRLLKERVIFLVGQVEEHMANLIVAQLLFLESESPDKDIYLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCMGQAASMGAFLLAGGAKGKRHCLPNSRVMIHQPLGGFQGQASDIAIHAKEILGIKNKLNQMLAEHTGQPLDIIERDTDRDNFMSATQAVEYGIVDSLLTSRG

Annotated regions:
phrase: TVCMGQAASMG
type: ACTIVE_SITE
name: ClpP_Ser_AS
description: ClpP, Ser active site

phrase: RHCLPNSRVMIHQ
type: ACTIVE_SITE
name: ClpP_His_AS
description: ClpP, histidine active site
Protein sequence:
MVLADLGKRINSAVNNAISNTQDDFTTSVDVMLKGIVTALLESDVNIALVSKLRNNIRSQLLSENRSEKSTTNAQTKKLIQKTVFDELCKLVTCEGSEEKAFVPKKRKTNIIMFVGLQGSGKTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIRARIPFYGSYTETDPAKVAEEGINKFKKEKFDIIIVDTSGRHHQEEELFQEMIEISNVIKPNQTIMVLDASIGQAAEQQSKAFKESSDFGAIILTKMDGHARGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSFISKLLGIGDIESLFEQLQTVSNKEDAKATMENIQKGKFTLLDFKKQMQTIMKMGPLSNIAQMIPGMSNMMNQVGEEETSQKMKKMVYVLDSMTKEELESDGRMFIEEPTRMVRVAKGSGTSVFEVEMILMQQQMMARMAQTATQQQPGAPGANARMPGMPNMPGMPNMPGMPNMPGMPKVTPQMMQQAQQKLKQNPGLMQNMMNMFGGGMGGGMGGGMPDMNEMMKMMQDPQMQQMAKQFGMG

Annotated regions:
phrase: VLADLGKRINSAVNNAISNTQDDFTTSVDVMLKGIVTALLESDVNIALVSKLRNNIRSQLLSENRSEKSTTNAQTKKLIQKTVFDELCKL
type: DOMAIN
name: Signal_recog_particl_SRP54_hlx
description: Signal recognition particle SRP54, helical bundle

phrase: NIIMFVGLQGSGKTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIRARIPFYGSYTETDPAKVAEEGINKFKKEKFDIIIVDTSGRHHQEEELFQEMIEISNVIKPNQTIMVLDASIGQAAEQQSKAFKESSDFGAIILTKMDGHARGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSFISKLL
type: DOMAIN
name: SRP54_GTPase_dom
description: Signal recognition particle, SRP54 subunit, GTPase domain

phrase: TNIIMFVGLQGSGKTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIRARIPFYGSYTETDPAKVAEEGINKFKKEKFDIIIVDTSGRHHQEEELFQEMIEISNVIKPNQTIMVLDASIGQAAEQQSKAFKESSDFGAIILTKMDGHARGGGAISAVAATNTPIIFIGTGEHIHDLEKFSPKSFISKLL
type: DOMAIN
name: SRP54_GTPase_dom
description: Signal recognition particle, SRP54 subunit, GTPase domain

phrase: PIIFIGTGEHIHD
type: DOMAIN
name: SRP54_GTPase_dom
description: Signal recognition particle, SRP54 subunit, GTPase domain

phrase: LGKRINSAVNNAISNTQDDFTTSVDVMLKGIVTALLESDVNIALVSKLRNNIRSQLLSENRSEKSTTNAQTKKLIQKTVFDE
type: DOMAIN
name: Signal_recog_particl_SRP54_hlx
description: Signal recognition particle SRP54, helical bundle

phrase: KTNIIMFVGLQGSGKTTSCTKLAVYYSKRGFKVGLVCADTFRAGAFDQLKQNAIRARIPFYGSYTETDPAKVAEEGINKFKKEKFDIIIVDTSGRHHQEEELFQEMIEISNVIKPNQTIMVLDASIGQAAEQQSKAFKESSDFGAIILTKMDGHARGGGAISAVAATNTPIIFIGTGEHIHDLEKF
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: KFTLLDFKKQMQTIMKMGPLSNIAQMIPGMSNMMNQVGEEETSQKMKKMVYVLDSMTKEELESDGRMFIEEPTRMVRVAKGSGTSVFEVEMILMQQQMMAR
type: DOMAIN
name: Signal_recog_particle_SRP54_M
description: Signal recognition particle, SRP54 subunit, M-domain
Protein sequence:
MWRFAVFLAAFFVQDVVGSHGDPELHMTTPQIIERWGYPAMIYTVATDDGYILEMHRIPFGKTNVTWPNGKRPVVFMQHGLLCASSDWVVNLPDQSAGFLFADAGFDVWLGNMRGNTYSMKHKDLKPSHSAFWDWSWDEMATYDLNAMINHVLEVTGQDSVYYMGHSQGTLTMFSHLSKDDGSFAKKIKKFFALAPIGSVKHIKGFLSFFANYFSLEFDGWFDIFGAGEFLPNNWAMKLAAKDICGGLKVEADLCDNVLFLIAGPESDQWNQTRVPVYATHDPAGTSTQNIVHWMQMVHHGGVPAYDWGTKTNKKKYGQANPPEYDFTAIKGTKIYLYWSDADWLADTPDVPDYLLTRLNPAIVAQNNHLPDYNHLDFTWGLRAPDDIYRPAIKLCTDDYLGK

Annotated regions:
phrase: TPQIIERWGYPAMIYTVATDDGYILEMHRIPFGKTNVTWPNGKRPVVFMQHGLLCASSDWVVN
type: DOMAIN
name: AB_hydrolase_lipase
description: Partial AB-hydrolase lipase domain
Protein sequence:
MSKFVFDSMLPKYPQFQPFISSHHLTTTPPNSSSAAVAAALAAAAASASASVSASSSSNNNSSNTIAGSNTSNTNNSSSSPSSSSNNNSNLNLSGGSLSPSHLSQHLGQSPHSPVSSSSPFQQHHPQVQQQHLNHQQQQHLHHQQQQHHHQYSSLSAALQLQQQQHHISKLAAAAVASHGHAHQQLLLTPPSAGNSQAGDSSCSPSPSASGSSSLHRSLNDNSPGSASASASASAASSVAAAAAAAAAAASSSFAIPTSKMYPYVSNHPSSHGGLSGMAGFTGLEDKSCSRYTDTVMNSYQSMSVPASASAQFAQFYQHATAAASAVSAASAGAIGVDSLGNACTQPASGVMPGAGGAGGAGIADLPRYPWMTLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRAVKEINEQARRDREEQEKMKAQETMKSAQQNKQVQQQQQQQQQQQQQQQQQHQQQQQQPQDHHSIIAHNPGHLHHSVVGQNDLKLGLGMGVGVGVGGIGPGIGGGLGGNLGMMSALDKSNHDLLKAVSKVNS

Annotated regions:
phrase: NHYLTRRRRIE
type: DOMAIN
name: HD_metazoa
description: Homeodomain, metazoa

phrase: LCLTERQIKI
type: DOMAIN
name: HD_metazoa
description: Homeodomain, metazoa

phrase: WFQNRRMKL
type: DOMAIN
name: HD_metazoa
description: Homeodomain, metazoa

phrase: RRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLK
type: DOMAIN
name: HD
description: Homeodomain

phrase: CPRRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK
type: DOMAIN
name: HD
description: Homeodomain

phrase: RRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKK
type: DOMAIN
name: HD
description: Homeodomain

phrase: RRRGRQTYTRFQTLELEKEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKELRA
type: DOMAIN
name: HD
description: Homeodomain

phrase: IAHALCLTERQIKIWFQNRRMKL
type: CONSERVED_SITE
name: Homeobox_CS
description: Homeobox, conserved site