nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MAVRSRPQLAFQTEKENGIGITAFNETAKLYANVVEALDAQRLRIFDSVAGSLKTEYILEKEKVISCIAWEQKPLYASEQITTDISGSGEILVLGTNSGEILIYSEHLGSLTRTYSFGILQKIIGAHVLANDGFAIDITGKVVCFSVNTGEVRTSFTVPSSSREFSGLYLSTVFKNLALASSHNIHIVDLNHRNPIDSLTTHTSMINSVVFQYLKDENKFYFGVSANQDRFINLYSKELDGTGEFPTNTVKNVGALVCENEVKMLSIAYEIENPETGVLAALTNDGTIEMFENPWLSKLRQNGTNASSLSHRRKLLTSHSTLKICFCRSRGDPPIVLESIAFESTDSLTVVWKESTRTVFETVPWRILSSQATNGLIELVRSKTRLTSKNKTVSNVYDESNATISSGVMQKDLRKTEEIGSAEAMEGEEQEPSLAERLQNLTKLDQQAQALSTQISASTSLSTVLTQALKTNDQSLLESCFNNNNVETIDTTIRRLDPSLAPILLDKLAEKLALRPMRADVLMVWIRCTLITHGGHLVLVDDLKHKLANLHSILEDRASKYSSMLALQGKLDLVLSQIAFRKAGGSKDNAEDEEPISIYYEGYEESMDEASSTGDEGYSSDDSVDNEMYSDEENSSKGAFPDEENENRELSEDYSGDESLENSESE

Annotated regions:
phrase: NDQSLLESCFNNNNVETIDTTIRRLDPSLAPILLDKLAEKLALRPMRADVLMVWIRCTLITHGGHLVLVDDLKHKLANLHSILEDRASKYSSMLALQGKLDLV
type: DOMAIN
name: SSU_processome_Utp12
description: Small-subunit processome, Utp12
Protein sequence:
MFTELSEIVRSFPRARVLLIGDLILDRYIFGDAERISPEAPVPVLRAIERQERVGGTGNVAACLAALGAKVHCIGAIGPDATGQQLVSLIEAAGADCGGCVVADDRQTTTKTRFVGLAQHRHRQQLMRLDEEYTAPLPKPAAAKLTATVLKAIPDCDVVCLEDYQKGVIDRSLMVAIVEAARAAGRPILVDPASHRPFETYRGATILTPNRTELSTAAGRAFDTPQSVLDHGPACLDEWGVDGLVVTLDRDGAVVVRRDADPVHLPTRPRAVYDNTGAGDAVLAALSAAIAVGADLENATRLANIAGGLEVEKFGCVPISADELLADLRLAGRRRNGKLLRVDDLTAELNLRRDRGEIVVFTNGVFDILHPGHVTYLAEAREQGSLLVVGLNADRSVRQQGKGDDRPINDEQFRATMLGALECVDYVVLFDEVDPLKLIDRVQPDVLVKGADWAGKGVVGRELVEKRGGRVSLVPVVEGYSTTSILQRIRYGRST

Annotated regions:
phrase: RVLLIGDLILDRYIFGDAERISPEAPVPVLRAIERQERVGGTGNVAACLAALGAKVHCIGAIGPDATGQQLVSLIEAAGADCGGCVVADDRQTTTKTRFVGLAQHRHRQQLMRLDEEYTAPLPKPAAAKLTATVLKAIPDCDVVCLEDYQKGVIDRSLMVAIVEAARAAGRPILVDPASHRPFETYRGATILTPNRTELSTAAGRAFDTPQSVLDHGPACLDEWGVDGLVVTLDRDGAVVVRRDADPVHLPTRPRAVYDNTGAGDAVLAALSAAIAVGADLENATRLANIAGGLEVEKFGC
type: DOMAIN
name: PfkB_dom
description: Carbohydrate kinase PfkB

phrase: RRDRGEIVVFTNGVFDILHPGHVTYLAEAREQGSLLVVGLNADRSVRQQGKGDDRPINDEQFRATMLGALECVDYVVLFDEVDPLKLIDRVQPDVLVKGADWAGKGVVGRELVEKRGGRVSLVPVVEGYSTTSILQRI
type: DOMAIN
name: RfaE_dom_II
description: RfaE bifunctional protein, domain II

phrase: RVLLIGDLILDRYIFGDAERISPEAPVPVLRAIERQERVGGTGNVAACLAALGAKVHCIGAIGPDATGQQLVSLIEAAGADCGGCVVADDRQTTTKTRFVGLAQHRHRQQLMRLDEEYTAPLPKPAAAKLTATVLKAIPDCDVVCLEDYQKGVIDRSLMVAIVEAARAAGRPILVDPASHRPFETYRGATILTPNRTELSTAAGRAFDTPQSVLDHGPACLDEWGVDGLVVTLDRDGAVVVRRDADPVHLPTRPRAVYDNTGAGDAVLAALSAAIAVGADLENATRLANIAGGLEVEKFGCVPISADEL
type: DOMAIN
name: RfaE_dom_I
description: RfaE bifunctional protein, domain I

phrase: FTNGVFDILHPGHVTYLAEAREQGSLLVVGLNADRSVRQQGKGDDRPINDEQFRATMLGALECVDYVVLFDEVDPLKLIDRVQPDVLVKGADW
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: VVFTNGVFDILHPGHVTYLAEAREQGSLLVVGLNADRSVRQQGKGDDRPINDEQFRATMLGALECV
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain
Protein sequence:
MDKKKYIRNFSIVAHIDHGKSTLADRLLEKTGTLTQREMEQQVLDTMELEKERGITIKSQAARLIYKRENGEEYILNLIDTPGHVDFTYEVSRSLAACEGAILVVDATQGIQAQTLANCYLALDNDLEIVPVINKVDLASARPDEIKQEIEDVIGIEAEDAPLVSAKTGLNIEDVLEEIVEKVPAPEGDENAPLKALIFDSYYDSYKGVVCHIRVKDGKVKPGTKIKLMSTDKVYEVVETGVFTPALMPLKEGLSAGEVGYITASIKNVRDARVGDTVTEAARPTEEALPGYKPAIPMVYSGIYPVDGAKYEELKEALEKLQINDAALSFEPETSVALGFGFRCGFLGLLHMEIIQERVEREFNLDIITTAPSVIYKVTKTNGESFDLTNPTNLPPMTEIAYMEEPVVKASIITPTDYTGAVMELCQDRRGKFIDMQYLEETRVVIHYEIPLNEIVYDFFDTLKSKTRGYASLDYELKGYEQSKLVKLDILLNGDNVDALSMIVPEVKAYQRGRAIAEKLKEIIPRHMFEVPIQAAVGSKIIARETVKAMRKDVLAKCYGGDISRKKKLLEKQKEGKKRMRQLGTVEVPQEAFMSVLKVD

Annotated regions:
phrase: YIRNFSIVAHIDHGKSTLADRLLEKTGTLTQREMEQQVLDTMELEKERGITIKSQAARLIYKRENGEEYILNLIDTPGHVDFTYEVSRSLAACEGAILVVDATQGIQAQTLANCYLALDNDLEIVPVINKVDLASARPDEIKQEIEDVIGIEAEDAPLVSAKTGLNIEDVLEEIVEKV
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: EPVVKASIITPTDYTGAVMELCQDRRGKFIDMQYLEETRVVIHYEIPLNEIVYDFFDTLKSKTRGYASLDYELKGYEQSKLVKLD
type: DOMAIN
name: EFG_V-like
description: Elongation factor EFG, domain V-like

phrase: NFSIVAHIDHGKS
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: ERGITIKS
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: NLIDTPGHVD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: RSLAACEGAIL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: IVPVINKVD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: GVVCHIRVKDGKVKPGTKIKLMSTDKVYEVVETGVFTPALMPLKEGLSAGEVGYITASIKNVRDARVGDTV
type: DOMAIN
name: EFTu-like_2
description: Translation elongation factor EFTu-like, domain 2

phrase: LNGDNVDALSMIVPEVKAYQRGRAIAEKLKEIIPRHMFEVPIQAAVGSKIIARETVKAMRKDVLAKCYGGDISRKKKLLEKQKEGKKRMRQLGTVEVPQEAFMSVL
type: DOMAIN
name: LepA_CTD
description: GTP-binding protein LepA, C-terminal

phrase: KYIRNFSIVAHIDHGKSTLADRLLEKTGTLTQREMEQQVLDTMELEKERGITIKSQAARLIYKRENGEEYILNLIDTPGHVDFTYEVSRSLAACEGAILVVDATQGIQAQTLANCYLALDNDLEIVPVINKVDLASARPDEIKQEIEDVIGIEAEDAPLVSAKTGLNIEDVLEEIVEKVPAP
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: EPVVKASIITPTDYTGAVMELCQDRRGKFIDMQYLEETRVVIHYEIPLNEIVYDFFDTLKSKTRGYASLDYELKGYEQS
type: DOMAIN
name: LepA_IV
description: Elongation factor 4, domain IV

phrase: RNFSIVAHIDHGKSTLADRLLEKTGTLTQREMEQQVLDTMELEKERGITIKSQAARLIYKRENGEEYILNLIDTPGHVDFTYEVSRSLAACEGAILVVDATQGIQAQTLANCYLALDNDLEIVPVINKVDLASARPDEIKQEIEDVIGIEAEDAPLVSAKTGLNIEDVLEE
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: DTMELEKERGITIKS
type: CONSERVED_SITE
name: G_TR_CS
description: Tr-type G domain, conserved site

phrase: EEPVVKASIITPTDYTGAVMELCQDRRGKFIDMQYLEETRVVIHYEIPLNEIVYDFFDTLKSKTRGYASLDYELKGYEQSKLVKL
type: DOMAIN
name: EFG_V-like
description: Elongation factor EFG, domain V-like
Protein sequence:
MNIQSDGIRIDLVTGSRRISNLGWASVLLLGTSGFLLTGLSSYLGKDLIPFLYPSEEHMKIAFAPQGLVMCFYGIAGLFLSTYLWCAILWNVGGGYNEFDRQEGTITIFRWGFPGQNRRIRIRCLIKDVKAVRIETQTGLLSRNDISILLRDKQRLVFNQLGDSLTLQEIEDKAVQLAQFLQVPLEGV

Annotated regions:
Protein sequence:
MKQAGFPLGILLLFWVSYVTDFSLVLLIKGGALSGTDTYQSLVNKTFGFPGYLLLSVLQFLYPFIAMISYNIIAGDTLSKVFQRIPGVDPENVFIGRHFIIGLSTVTFTLPLSLYRNIAKLGKVSLISTGLTTLILGIVMARAISLGPHIPKTEDAWVFAKPNAIQAVGVMSFAFICHHNSFLVYSSLEEPTVAKWSRLIHMSIVISVFICIFFATCGYLTFTGFTQGDLFENYCRNDDLVTFGRFCYGVTVILTYPMECFVTREVIANVFFGGNLSSVFHIVVTVMVITVATLVSLLIDCLGIVLELNGVLCATPLIFIIPSACYLKLSEEPRTHSDKIMSCVMLPIGAVVMVFGFVMAITNTQDCTHGQEMFYCFPDNFSLTNTSESHVQQTTQLSTLNISIFQ

Annotated regions:
phrase: MKQAGFPLGILLLFWVSYVTDFSLVLLIKGGALSGTDTYQSLVNKTFGFPGYLLLSVLQFLYPFIAMISYNIIAGDTLSKVFQRIPGVDPENVFIGRHFIIGLSTVTFTLPLSLYRNIAKLGKVSLISTGLTTLILGIVMARAISLGPHIPKTEDAWVFAKPNAIQAVGVMSFAFICHHNSFLVYSSLEEPTVAKWSRLIHMSIVISVFICIFFATCGYLTFTGFTQGDLFENYCRNDDLVTFGRFCYGVTVILTYPMECFVTREVIANVFFGGNLSSVFHIVVTVMVITVATLVSLLIDCLGIVLELNGVLCATPLIFIIPSACYLKLSEEPRTHSDKIMSCVMLPIGAVVMVFGFVMA
type: DOMAIN
name: AA_transpt_TM
description: Amino acid transporter, transmembrane domain
Protein sequence:
MQNKDACKSLSSWVSLSISLLVLTVPLIWPYNSTAFPIYAQQNYESPREATGRIVCANCHLAKKAVDIEVPQAVLPDTVFEAVVKIPYDTQIKQVLSNGKKGGLNVGAVLILPEGFELAPSDRIPPELKEKISNIYFQPYSPEKKNILVVGPLPGNKYSELVFPILSPDPATNKKASFLKYPIYLGGNRGRGQVYPDGSKSNNNVFSASTAGTISQITRQKKGGYEVIIKTTDGREVTDIIPPGPELIVSEGESIKADQLLTNNPNVGGFGQADAEIVLQDPLRIQGLLVFFASVILAQIFLVLKKKQFEKVQLAEMNF

Annotated regions:
phrase: FPIYAQQNYESPREATGRIVCANCHLAKKAVDIEVPQAVLPDTVFEAVVKIPYDTQIKQVLSNGKKGGLNVGAVLILPEGFELAPSDRIPPELKEKISNIYFQPYSPEKKNILVVGPLPGNKYSELVFPILSPDPATNKKASFLKYPIYLGGNR
type: DOMAIN
name: Cyt_f_lg_dom
description: Cytochrome f large domain
Protein sequence:
MGLDVKIPAPIENIEVNGIKNDSRQVNLGDLFVAVPGSSLDGRAYIGEASSLGACAILTSPGIEIKADIPVIMTGNLRSVIAAIADRFYRNPTSKLKVAGVTGTNGKTTVTYLLAGIFEAAGQKWGRIGTTSYDLGGQLIQSGNTTPGSIDLQRYFATMVERDLAGCAMEVSSHALHQGRCQAVNFASATFTNLSQDHLDYHKDMESYFEAKAMLFDTAPVAIINIDDIRGRKLAARAKGKVITFGAERKADLRYRVKSADMHGSKMEFEYEGSKVAFDFPLPGWFNHQNAAAAATTAIALGLSLNSAVEGLQSPPAVPGRLQAVKLGQPFGVYVDYAHTPDALEKLLKSVRQFHPKNLRIVFGCGGDRDKSKRPIMGSVAAELADIVYVTSDNPRTEQPAAIIKDIVKGISDKKRLQVIEDRAQAIKAVLSQAMDGDIVVIAGKGHEDYQIVGTVRKFFSDIEVAKAILNKMSYGNNG

Annotated regions:
phrase: GRLQAVKLGQPFGVYVDYAHTPDALEKLLKSVRQFHPKNLRIVFGCGGDRDKSKRPIMGSVAAELADIVYVTSDNPRTEQPAAIIKDIVKGISDKKRLQVIEDRAQAIKAVLSQAMDGDIVVIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: VNGIKNDSRQVNLGDLFVAVPGSSLDGRAYIGEASSLGACAILTSPGIEIKADIPVIMTGNLRSV
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: VTGTNGKTTVTYLLAGIFEAAGQKWGRIGTTSYDLGGQLIQSGNTTPGSIDLQRYFATMVERDLAGCAMEVSSHALHQGRCQAVNFASATFTNLSQDHLDYHKDMESYFEAKAMLFDTAPVAIINIDDIRGRKLAARAKGKVITFGAERKADLRYRVKSADMHGSKMEFEYEGSKVAFDFPLPGWFNHQNAAAAAT
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central
Protein sequence:
MQVEPGGTPLAPTAAVVIVAAGSGTRLGRERPKAYVECAGVTILERSLRTVLTLPEPVQIVVVAPAELVDETARLCAAAAGLASDAVAVTAGGATRQESVARGLALLAPSIETVLVHDAARALTPVDQFERVITAVRATGGGVIPGLPVTDTIKRVEPAGTILDTVDRSELAAVQTPQGFPRSLLDDAYAAAEREFTDDAALLAAHGHPSVVVPGDALAFKITTPWDLARAEQLLAPPAATAAPRVGVGIDVHAFDDSSPLWLAGLHWPGERGLSGHSDGDPVAHAVCDALLSAAGLGDIGSRFGTADPRFQDAHGEVFLRATRDLVEAAGFTIGNVSVQLIGNRPRFSPRREEAESLLSALLAAPVSVAATTSDALGFTGRGEGVTAVATALVLPSSSTRA

Annotated regions:
phrase: PRVGVGIDVHAFDDSSPLWLAGLHWPGERGLSGHSDGDPVAHAVCDALLSAAGLGDIGSRFGTADPRFQDAHGEVFLRATRDLVEAAGFTIGNVSVQLIGNRPRFSPRREEAESLLSALLAAPVSVAATTSDALGFTGRGEGVTAVATALVL
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: VLVHDAA
type: CONSERVED_SITE
name: ISPD_synthase_CS
description: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site

phrase: SDGDPVAHAVCDALL
type: CONSERVED_SITE
name: MECDP_synthase_CS
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site

phrase: RVGVGIDVHAFDDSSPLWLAGLHWPGERGLSGHSDGDPVAHAVCDALLSAAGLGDIGSRFGTADPRFQDAHGEVFLRATRDLVEAAGFTIGNVSVQLIGNRPRFSPRREEAESLLSALLAAPVSVAATTSDALGFTGRGEGVTAVATAL
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RVGVGIDVHAFDDSSPLWLAGLHWPGERGLSGHSDGDPVAHAVCDALLSAAGLGDIGSRFGTADPRFQDAHGEVFLRATRDLVEAAGFTIGNVSVQLIGNRPRFSPRREEAESLLSALLAAPVSVAATTSDALGFTGRGEGVTAVATAL
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RVGVGIDVHAFDDSSPLWLAGLHWPGERGLSGHSDGDPVAHAVCDALLSAAGLGDIGSRFGTADPRFQDAHGEVFLRATRDLVEAAGFTIGNVSVQLIGNRPRFSPRREEAESLLSALLAAPVSVAATTSDALGFTGRGEGVTAVATAL
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Protein sequence:
MSDDRLIVALDVPNVVQGLALAEKLGDAVSFYKIGLGMLTGGGLALANELKQDHGKRIFLDMKLFDISATVEAAVRGLAQFNLDFLTVHGDPHVVRAAKEGAAGSDTKILAVTILTSLDRTDLDDCLIRDGEMLDLVAERAGRAFEAGADGVISSPHEATMIRALPEAKGRLIVTPGVRPTGSASGDQKRIATPRQAIADGADHIVVGRPIWQHQDPRAAAQMVVADLP

Annotated regions:
phrase: RLIVALDVPNVVQGLALAEKLGDAVSFYKIGLGMLTGGGLALANELKQDHGKRIFLDMKLFDISATVEAAVRGLAQFNLDFLTVHGDPHVVRAAKEGAAGSDTKILAVTILTSLDRTDLDDCLIRDGEMLDLVAERAGRAFEAGADGVISSPHEATMIRALPEAKGRLIVTPGVRPTGSASGDQKRIATPRQAIADGADHIVVGRPIWQHQDPRAAAQM
type: DOMAIN
name: OMPdeCOase_dom
description: Orotidine 5'-phosphate decarboxylase domain

phrase: RLIVALDVPNVVQGLALAEKLGDAVSFYKIGLGMLTGGGLALANELKQDHGKRIFLDMKLFDISATVEAAVRGLAQFNLDFLTVHGDPHVVRAAKEGAAGSDTKILAVTILTSLDRTDLDDCLIRDGEMLDLVAERAGRAFEAGADGVISSPHEATMIRALPEAKGRLIVTPGVRPTGSASGDQKRIATPRQAIADGADHIVVGRPIWQHQDPRAAAQ
type: DOMAIN
name: OMPdeCOase_dom
description: Orotidine 5'-phosphate decarboxylase domain
Protein sequence:
MESLPTTVSGKSDRRGRFSKSQNTSKPSLILAFFSCLAWLYVAGRLWQDAQYRAALNTVLKMNYDQRPKVLTVEDKLVVLGCKDLERRIVETEMELAQAKSQGYLKKQKSVSSSGKKMLAVIGVYTGFGSHLKRNKFRGSWMPRDDALKKLEERGVVIRFVIGRSANRGDSLDRKIDEENRATKDFLILENHEEAQEELPKKVKFFYSAAVQNWDAEFYVKVDDNVDLDLEGMIALLESRRSQDGAYIGCMKSGDVITEEGSQWYEPEWWKFGDDKSYFRHATGSLVILSKNLAQYVNINSGLLKTYAFDDTTIGSWMIGVQATYIDDNRLCCSSTRQEKVCSMA

Annotated regions:
phrase: SKPSLILAFFSCLAWLYVAGRLWQDAQYRAALNTVLKMNYDQRPKVLTVEDKLVVLGCKDLERRIVETEMELAQAKS
type: DOMAIN
name: DUF4094
description: Domain of unknown function DUF4094
Protein sequence:
MSRIGKKPVAIPSGIEVKVDGNVLKFKKGNAQKELDTKNHVDVKVEDGKVEFSPKGEDRQSMAFWGTYRALAHNIVVGLTDGFSKQLEINGVGYKAAMKGKILELTLGYSHLVNYEVPDGIEISVDKNVITIKGTDKQQVGQVAAIIRDFRAPEPYKGKGVKYLEEHIIRKAGKTAKK

Annotated regions:
phrase: GVGYKAAMKGKILELTLGYSHLVNYEVPDGIEISVDKNVITIKGTDKQQVGQVAAIIRDFRAPEPYKGKGVK
type: DOMAIN
name: Ribosomal_uL6_a/b-dom
description: Large ribosomal subunit protein uL6, alpha-beta domain

phrase: IPSGIEVKVDGNVLKFKKGNAQKELDTKNHVDVKVEDGKVEFSPKGEDRQSMAFWGTYRALAHNIVVGLTD
type: DOMAIN
name: Ribosomal_uL6_a/b-dom
description: Large ribosomal subunit protein uL6, alpha-beta domain

phrase: PEPYKGKG
type: CONSERVED_SITE
name: Ribosomal_uL6_CS
description: Large ribosomal subunit protein uL6, conserved site
Protein sequence:
MSDRIYLTRDGYNRLKEELHLLMTETRKEVLEKIAEARSHGDLSENAEYDAAREEQSQLEAKIGEIENKLASATILDPKQIKTDRVYILTSVKLRNLDAEDEIIEYTLVSSEEADSDLGKISVRSPVGRSLIGKSVGDKVTISVPKGELHYEILDIFVK

Annotated regions:
phrase: IYLTRDGYNRLKEELHLLMTETRKEVLEKIAEARSHGDLSENAEYDAAREEQSQLEAKIGEIENKLASAT
type: DOMAIN
name: Tscrpt_elong_fac_GreA/B_N
description: Transcription elongation factor, GreA/GreB, N-terminal

phrase: SVRSPVGRSLIGKSVG
type: CONSERVED_SITE
name: TF_GreA/GreB_CS
description: Transcription elongation factor, GreA/GreB, conserved site

phrase: TDRVYILTSVKLRNLDAEDEIIEYTLVSSEEADSDLGKISVRSPVGRSLIGKSVGDKVTISVPKGELHYEILD
type: DOMAIN
name: Tscrpt_elong_fac_GreA/B_C
description: Transcription elongation factor, GreA/GreB, C-terminal

phrase: ELHLLMTETRKEVLEKIAEARSHGDLSENAE
type: CONSERVED_SITE
name: TF_GreA/GreB_CS
description: Transcription elongation factor, GreA/GreB, conserved site
Protein sequence:
MAELVLKTDFPDLKLAGRGKVRDIYDLGDALLIVTTDRISAFDVIMNEAIPDKGYVLTQISSFWFRQMEDIIPNHIISTDVKDFPAECQKYAAQLEGRSMLVKKAKPLPVECIVRGYISGSGWKDYKATGAICGITLPAGLVESDKLEEPIFTPSTKAELGEHDENISFDKCVELIGRELAEKIRDVTIAIYKRARDIADTKGIIIADTKFEYGIYNGELIIIDECMTPDSSRFWPKDSYKPGGAQPSFDKQFLRDYLETLDWGKTAPAPPLPEEIVRKTGEKYMEALVRLTGKGK

Annotated regions:
phrase: LKLAGRGKVRDIYDLGDALLIVTTDRISAFDVIMNEAIPDKGYVLTQISSFWFRQMEDIIPNHIISTDVKDFPAECQKYAAQLEGRSMLVKKAKPLPVECIVRGYISGSGWKDYKATGAICGITLPAGLVESDKLEEPIFTPSTKAELGEHDENISFDKCVELIGRELAEKIRDVTIAIYKRARDIADTKGIIIADTKFEYGIYNGELIIIDECMTPDSSRFWPKDSYKPGGAQPSFDKQFLRDYLETLDWGKTAPAPPLPEEIVRKTGEKYMEALVRLT
type: DOMAIN
name: SAICAR_synt/ADE2_N
description: SAICAR synthetase/ADE2, N-terminal

phrase: PLPVECIVRGYISG
type: CONSERVED_SITE
name: SAICAR_synthetase_CS
description: SAICAR synthetase, conserved site

phrase: RGKVRDIYDLGDALLIVTTDRISAFDVIMNEAIPDKGYVLTQISSFWFRQMEDIIPNHIISTDVKDFPAECQKYAAQLEGRSMLVKKAKPLPVECIVRGYISGSGWKDYKATGAICGITLPAGLVESDKLEEPIFTPSTKAELGEHDENISFDKCVELIGRELAEKIRDVTIAIYKRARDIADTKGIIIADTKFEYGIYNGELIIIDECMTPDSSRFWPKDSYKPGGAQPSFDKQFLRDYLETLDWG
type: DOMAIN
name: SAICAR_synt/ADE2_N
description: SAICAR synthetase/ADE2, N-terminal
Protein sequence:
MRVRGMQRSWQNLGRWGILFLGILIICRATDNLWVTVYYGVPVWKDAETTLFCASDAKAHHTEAHNVWATHACVPTDPDPQEINLENVTEKFNMWKNKMVDQMHEDIISIWDQSLKPCVKLTPLCVTLECSKVTINNSTTHNTAPNNNNTIEKEMRNCTYNMTTEVIDKKKKVHSLFYRLDIVPITNETTNGSQYRLINCNTSAITQACPKVNFEPIPIHYCAPAGFAILKCKDKNFNGTGTCRNVSTVQCTHGIKPVVSTQLLLNGSLAEENIRISSENLTDNAKIIIVQLNESVPINCIRPSNNTRESIRIGPGQAFYAAGEIIGDIRQAHCNVSRTEWNNTLQKVAGELKRLFNTTTIVFQNSSGGDLEITTHSFNCGGEFFYCNTSDLFNSNWTNGNWTNGIGSTETNDTITLPCRIKQIIRMWQRVGQAMYAPPIKGVIECKSNITGIILVRDGGKNNTDKETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRAKRRVVEREKRAVGIGAVFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHLLKLTVWGIKQLQARVLAIERYLKDQQLLGIWGCSGKLICTTTVPWNSSWSNKSYDDIWNNMTWMEWDREVSNYTNIIYSLIEESQNQQEKNEQDLLXLDKWASLWNWFDISHWLWYIRIFIMIVGGLIGLRIIFAVLSVVNRVRQGYSPLSLQTLIPSPRGPDRPEGIEEGGGEQDKDRSIRLVSGFLALAWDDLRSLCLFS

Annotated regions:
phrase: VQARQLLSGIVQQQSNLLRAIEAQQHLLKLTVWGIKQLQARVLAIERYLKDQQLLGIWGCSGKLICTTTVPWNSSWSNKSYDDIWNNMTWMEWDREVSNYTNIIYSLIEESQNQQEKNEQDLLXLD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHLLKLTVWGIKQLQARVLAIERYLKDQQLLGIWGCSGKLICTTTVPWNSSWSNKSYDDIWNNMTWMEWDREVSNYTNIIYSLIEESQNQQEKNEQDLLXLDKWASLWNWFDISHWLWYIRIFIMIVGGLIGLRIIFAVLSVVNRVRQGYSPLSLQT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKDAETTLFCASDAKAHHTEAHNVWATHACVPTDPDPQEINLENVTEKFNMWKNKMVDQMHEDIISIWDQSLKPCVKLTPLCVTLECSKVTINNSTTHNTAPNNNNTIEKEMRNCTYNMTTEVIDKKKKVHSLFYRLDIVPITNETTNGSQYRLINCNTSAITQACPKVNFEPIPIHYCAPAGFAILKCKDKNFNGTGTCRNVSTVQCTHGIKPVVSTQLLLNGSLAEENIRISSENLTDNAKIIIVQLNESVPINCIRPSNNTRESIRIGPGQAFYAAGEIIGDIRQAHCNVSRTEWNNTLQKVAGELKRLFNTTTIVFQNSSGGDLEITTHSFNCGGEFFYCNTSDLFNSNWTNGNWTNGIGSTETNDTITLPCRIKQIIRMWQRVGQAMYAPPIKGVIECKSNITGIILVRDGGKNNTDKETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRAKRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MSSQKVFGITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQRFVYEVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVFDSLLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDLRALNGTRVTDEILELVPKPNVFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFEKNDFFFRYKFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKIAHPFTKPFESSYCCPTEDDYEMIQDKYGSHKTETALNALKLVTDENKEEESIKDAPKAYLSTMYIGLDFNIENKKEKVDIHIPCTEFVNLCRSFNEDYGDHKVFNLALRFVKGYDLPDEVFDENEKRPSKKSKRKNLDARHETVKRSKSDAASGDNINGTTAAVDVN

Annotated regions:
phrase: GITGPVSTVGATAAENKLNDSLIQELKKEGSFETEQETANRVQVLKILQELAQRFVYEVSKKKNMSDGMARDAGGKIFTYGSYRLGVHGPGSDIDTLVVVPKHVTREDFFTVFDSLLRERKELDEIAPVPDAFVPIIKIKFSGISIDLICARLDQPQVPLSLTLSDKNLLRNLDEKDLRALNGTRVTDEILEL
type: DOMAIN
name: PolA_pol_NTPase
description: Poly(A) polymerase, nucleotidyltransferase domain

phrase: DFFFRYKFYLEITAYTRGSDEQHLKWSGLVESKVRLLVMKLEVLAGIKIAHPFTKPFESSYCCPTEDDYEMIQDKYGSHKTETALNALKLVTDENKEEESIKDAPKAYLSTMYIGLDFNIENKKEKVDIHIPCTEFVNLCRSFNEDYGDHKVFNLALRFVKGYDLPDEVFDENEKRPS
type: DOMAIN
name: PolA_pol_RNA-bd_dom
description: Poly(A) polymerase, RNA-binding domain

phrase: VFRIALRAIKLWAQRRAVYANIFGFPGGVAWAMLVARICQLYPNACSAVILNRFFIILSEWNWPQPVILKPIEDGPLQVRVWNPKIYAQDRSHRMPVITPAYPSMCATHNITESTKKVILQEFVRGVQITNDIFSNKKSWANLFE
type: DOMAIN
name: PolA_pol_cen_dom
description: Poly(A) polymerase, central domain
Protein sequence:
MSAAATADTTSPHIPVLLPAILDAVAPVQGVWLDGTFGAGGYTRGLLEAGADRVIAVDRDPLAFEMAADWAGSYGTRLVQQPGVFSEMDTYAVALDGVVLDLGVSSMQLDLAERGFSFMRDGPLDMRMSQEGPSAADIVNEASAETLANILFQYGEERASRRIAKAILTERALAPITTTLHLAGIIERCLPRAKPGQSHPATRSFQALRIAVNDEYGELYQGLMAAERALKPGGQLAVVTFHSVEDRMVKRFLTARAGAGGNANRFAPEVQRDAPAFTLRSRKAIVADDAEVAANPRARSAKLRIAVRTQAPAGVIDAKSVGMPVVKVGN

Annotated regions:
Protein sequence:
MYIKDIIKDIPHKVLSGSIEKDISNIFYDSREVIKDALFVCITGIKTDGHKYIDDVIKKGAQAIIVSKHININEAYRDITVIQVPDSRKALAIASRNFCHNPSKDFNLIGITGTNGKTTTTFLIDHILKQHHKKTGLIGTIENRINDKVIESSRTTPESYDLQKLLQNMKNEQVDNVIMEVSSHALSLDRVYGLSYKTAVFTNLSLDHLDYHKTMDNYLKAKAKLFKMSEYGVVNIDDKASNAILREAQCKKIYTYSTMNPKADFYANKIELNATGVVFNLIFDEKIYRVNYSTPGKFSVYNALAGIIATYIEGIPLSNIIEYINQFTGVSGRFETINSQSGYSVIVDYAHSPDGLLNVLKSIKEFAKGRVITVFGCGGDRDKSKRPIMGEIASEYSDFVIITSDNPRTENPETIIKEIEVGISKNKCAYSTILSRKEGIKFAITMAEEDDVILIAGKGHETYQEINDEIYDFNDVEIVKETIQEESNLV

Annotated regions:
phrase: ISNIFYDSREVIKDALFVCITGIKTDGHKYIDDVIKKGAQAIIVSKHININEAYRDITVIQVPDSRKALAIASRN
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: IGITGTNGKTTTTFLIDHILKQHH
type: CONSERVED_SITE
name: Folylpolyglutamate_synth_CS
description: Folylpolyglutamate synthetase, conserved site

phrase: ITGTNGKTTTTFLIDHILKQHHKKTGLIGTIENRINDKVIESSRTTPESYDLQKLLQNMKNEQVDNVIMEVSSHALSLDRVYGLSYKTAVFTNLSLDHLDYHKTMDNYLKAKAKLFKMSEYGVVNIDDKASNAILREAQCKKIYTYSTMNPKADFYANKIELNATGVVFNLIFDEKIYRVNYSTPGKFSVYNALAGII
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRFETINSQSGYSVIVDYAHSPDGLLNVLKSIKEFAKGRVITVFGCGGDRDKSKRPIMGEIASEYSDFVIITSDNPRTENPETIIKEIEVGISKNKCAYSTILSRKEGIKFAITMAEEDDVILIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MSQRLVLASNNAKKAAEMQALLAPLGIEVVPQSELGVSEAEEPHATFVENALAKARHASAATGLPAIADDSGLCVTALGGAPGVHSARFAGEPKSDARNNLLLLDKLANETDRTAYFYSAVVLVRHAQDPRPLIADGEWHGEILEAPRGDSGFGYDPLFWLPELEQTAAELDAGLKNTLSHRGAAMRHLLDSLAAHPL

Annotated regions:
Protein sequence:
MIERIKKFLRTKFKPLLLLLVTVILYNGWTPHLGIFPPTFYDFAFNYYGFVDILTFLVIIVIAYKNDAFKKIFDIFRPKNLLFILFFIVGGNIFIALAHHLYFQMTPALEAFPEHSIDLANYFARTPFWTHSLDLFVIGPISEELIYREYLYRLFDKKCLACFVSVTMFAWVHTGFTYSFFLYLPISLVVTLAYHRRKAIGESIALHSSINLINTYLPNLLSFWVF

Annotated regions:
phrase: THSLDLFVIGPISEELIYREYLYRLFDKKCLACFVSVTMFAWVHTGFTYSFFLYLPISLVVTLAYHRRKAIGESIALHSSINL
type: DOMAIN
name: Rce1/LyrA-like_dom
description: CAAX prenyl protease 2/Lysostaphin resistance protein A-like domain
Protein sequence:
MLSAARLQFAQGSVRRLTVSARDAPTKISTLAVKVHGGSRYATKDGVAHLLNRFNFQNTNTRSALKLVRESELLGGTFKSTLDREYITLKATFLKDDLPYYVNALADVLYKTAFKPHELTESVLPAARYDYAVAEQCPVKSAEDQLYAITFRKGLGNPLLYDGVERVSLQDIKDFADKVYTKENLEVSGENVVEADLKRFVDESLLSTLPAGKSLVSKSEPKFFLGEENRVRFIGDSVAAIGIPVNKASLAQYEVLANYLTSALSELSGLISSAKLDKFTDGGLFTLFVRDQDSAVVSSNIKKIVADLKKGKDLSPAINYTKLKNAVQNESVSSPIELNFDAVKDFKLGKFNYVAVGDVSNLPYLDEL

Annotated regions:
phrase: TVSARDAPTKISTLAVKVHGGSRYATKDGVAHLLNRFNFQNTNTRSALKLVRESELLGGTFKSTLDREYITLKATFLKDDLPYYVNALADVLYKTAFKPHELTESVLPAARYDYAVAEQCPVKSAEDQLYAITFRKGLGNPLLY
type: DOMAIN
name: Pept_M16_N
description: Peptidase M16, N-terminal

phrase: GGSRYATKDGVAHLLNRFNFQN
type: BINDING_SITE
name: Pept_M16_Zn_BS
description: Peptidase M16, zinc-binding site
Protein sequence:
MAAVDVNQPITGHKSAIIRNYNTNPRLIYQTVCGVNGPLVILNDVKFPQFSEIVKITLPDGSKRSGQVLEISKNKAVVQVFEGTSGIDAKNTICEFTGDILRTPVSEDMLGRIFNGSGKPIDKGPPVLAEDFLDINGQPINPWSRIYPEEMIQTGISAIDVMNSIARGQKIPIFSASGLPHNEIAAQIVRQGGLVQLPDRPHEQTNFAIVFAAMGVNMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRIALTSAEFLAYQCKKHVLVVLTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRDGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRLIYPPINVLPSLSRLMKSAIGEGMTREDHSDVSNQLYACYAIGKDVQAMKAVVGEEALSSDDLLYLEFLTKFEKNFITQGHYENRSVFESLDIGWQLLRIFPREMLKRIPESTLEKYYPRGGAKE

Annotated regions:
phrase: VCGVNGPLVILNDVKFPQFSEIVKITLPDGSKRSGQVLEISKNKAVVQVFEGTSGIDAKNTICEFT
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_N
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain

phrase: GISAIDVMNSIARGQKIPIFSASGLPHNEIAAQIVRQGGLVQLPDRPHEQTNFAIVFAAMGVNMETARFFKQDFEENGSMENVCLFLNLANDPTIERIITPRIALTSAEFLAYQCKKHVLVVLTDMSSYAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRDGSITQIPILTMPNDDITHPIPDLTGYITEGQIYVDRQLHNRLIYPPINVLPSL
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_nucl-bd
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain

phrase: PPINVLPSL
type: ACTIVE_SITE
name: ATPase_a/bsu_AS
description: ATPase, alpha/beta subunit, nucleotide-binding domain, active site

phrase: AIGEGMTREDHSDVSNQLYACYAIGKDVQAMKAVVGEEALSSDDLLYLEFLTKFEKNFITQGHYENRSVFESLDIGWQLLRIFPREMLKRIPESTLEKY
type: DOMAIN
name: ATP-synt_VA_C
description: ATP synthase A/B type, C-terminal domain
Protein sequence:
MDTSSVTMHTERACCHQAQRAVAAMLDKAPSWLIWTAVLYVGLPFMLYWAVPYLFYHNKTKSRRIAIYVLGDLGHSPRICYHARSFSAAGWEVELCGYLEEQPPKDLLDDPRVTIRALPGASNAGKSLGQTARKVVLQTCHIVRQLWELRGCDYILIQNPPSIPLLPIVAIFKVLTRTRLILDWHNFAYTVLQLRVGRFLHPLVLVSYAVEFLFSRMADYHITVTAAMKDYLVQSFLLPARRIAVMYDRPGEQFRPLPAGERGAALAEPFIRGYIPAGFDVQRGDTILVTSTSFTLDEDINVLFGALKIYESAAAKFDTTLPRILLFVTGKGPLKGKYMEEVRNYKWERCTIHFLWLSAEDYPRLLQLCDFGVSLHTSTSGLDLPMKVLDMFGSGLPAFVMDYPAIGELVQDRVNGLRFTTRRELEQCLIFAIKDEHTRKVLKENALLESKNRWHQSWASAMSELQVVRQS

Annotated regions:
phrase: AAAKFDTTLPRILLFVTGKGPLKGKYMEEVRNYKWERCTIHFLWLSAEDYPRLLQLCDFGVSLHTSTSGLDLPMKVLDMFGSGLPAFVMDYPAIGELVQDRVNGLRFTTRRELEQCLIFAIKDEHTRKVLKEN
type: DOMAIN
name: Glyco_trans_1
description: Glycosyl transferase, family 1

phrase: SPRICYHARSFSAAGWEVELCGYLEEQPPKDLLDDPRVTIRALPGASNAGKSLGQTARKVVLQTCHIVRQLWELRGCDYILIQNPPSIPLLPIVAIFKVLTRTRLILDWHNFAYTVLQLRVGRFLHPLVLVSYAVEFLFSRMADYHITVTAAMKDYLVQSFLLPARRIAV
type: DOMAIN
name: Glyco_trans_4-like_N
description: Glycosyltransferase subfamily 4-like, N-terminal domain
Protein sequence:
MKTPRRRAREFAVQGIYQWQLNALTPATIEKNLRDNEQFAKADEALFRTLLYGVLNDPVRIESAIASHFERAPEDVSPVERAVLLMAAFELTQQAETPLAVIINEAIEIAKTFGGAEGHRFVNGVLDKYAAEVRPEEFEAVRSHRRNKRPAADKPVATDKPAAAE

Annotated regions:
phrase: RRAREFAVQGIYQWQLNALTPATIEKNLRDNEQFAKADEALFRTLLYGVLNDPVRIESAIASHFERAPEDVSPVERAVLLMAAFELTQQAETPLAVIINEAIEIAKTFGGAEGHRFVNGVLDKY
type: DOMAIN
name: NusB_RsmB_TIM44
description: NusB/RsmB/TIM44
Protein sequence:
MAKTDWKAEAKTLKKRLRKLKSQVTETVSDVAVDVGHEVAEVAGRISAKLKSAKPVSTLAPKDGFPTLPVIKGVEFSAAEAGIKYANRKDVMLIRLTPGTAMAGVFTRSSTRSGCVRDCQDKLAAKVPAGSGAAIIVNSGNSNAFTGKVGDKAVAAVTGGVAAALELPAERVFSSSTGVIGEPLPHEKITAVLPDLVANLREDAIEMAAHAMMTTDTFAKGAAATIQGDGGTIHIAGIAKGSGMIAPDMATMLVYIFTDAKISPVMLQRMLSRNVDATFNSITVDSDTSTSDTLLLAATGQSDAAAVKGPVAKAFETALQGVMQDLALQVIRDGEGATKLVEIRVTGATSDDDAAKVAFAIANSPLVKTALAGEDPNWGRIVAAIGKSGAEADRDRLTIRFGDVLVAKNGWRNPEYLEEDGAAHFKQDEILIRVDLGLGKSARTVWTCDLTNRYIEINADYRS

Annotated regions: