nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MRVRGTLRNYQQWWIWGVLGFWMLMVCNVVGNLWVTVYYGVPVWKEAKATLFCASDAKAYETEVHNVWATHACVPTDPNPQEIVLENVTENFNMWENDMVNQMHEDVISLWDQSLKPCVKLTPLCVTLDCENVDGNDTYNGTNEMKNCSFNTTTELRDKKQKVSALFYRLDIVPLNRSSSSNSSDYYRLISCNTSAITQACPKVTFDPIPIHYCAPAGFAILKCNNKTFNGTGPCHNVSTVQCTHGIKPVVSTQLLLNGSLAEKEIIIRSKNLSDNVKTIIVHLNESVEIVCTRPNNNTRKSIRIGPGQTFYATGAIIGNIREAHCNISRDKWNETLQRVGKKLEEQFPNKTINFTSSSGGDLEITTHSFNCRGEFFYCNTSKLFNSTYIPTYRPNNTQGNSSSTITIPCRIKQIINMWQEVGRAMYAPPIAGNITCKSHITGLLLVRDGGTGLNSSTETFRPGGGDMRDNWRSELYKYKVVEIKPLGVAPTAAKRRVVQREKRAVGLGAVFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQTRVLAIERYLKDQQLLGIWGCSGKLICTTAVPWNTSWSNRSQADIWGNMTWMQWDREISNYTNTIFRLLEDSQIQQESNEKDLLALDSWKNLWSWFDITNWLWYIKIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQTLIPNPRGPDRLGRIEEEGGEQDRDRSIRLVNGFLALAWDDLRSLCLFCYHQLRDFI

Annotated regions:
phrase: VQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQTRVLAIERYLKDQQLLGIWGCSGKLICTTAVPWNTSWSNRSQADIWGNMTWMQWDREISNYTNTIFRLLEDSQIQQESNEKDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQTRVLAIERYLKDQQLLGIWGCSGKLICTTAVPWNTSWSNRSQADIWGNMTWMQWDREISNYTNTIFRLLEDSQIQQESNEKDLLALDSWKNLWSWFDITNWLWYIKIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKEAKATLFCASDAKAYETEVHNVWATHACVPTDPNPQEIVLENVTENFNMWENDMVNQMHEDVISLWDQSLKPCVKLTPLCVTLDCENVDGND
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: GTNEMKNCSFNTTTELRDKKQKVSALFYRLDIVPLNRSSSSNSSDYYRLISCNTSAITQACPKVTFDPIPIHYCAPAGFAILKCNNKTFNGTGPCHNVSTVQCTHGIKPVVSTQLLLNGSLAEKEIIIRSKNLSDNVKTIIVHLNESVEIVCTRPNNNTRKSIRIGPGQTFYATGAIIGNIREAHCNISRDKWNETLQRVGKKLEEQFPNKTINFTSSSGGDLEITTHSFNCRGEFFYCNTSKLFNSTYIPTYRPNNTQGNSSSTITIPCRIKQIINMWQEVGRAMYAPPIAGNITCKSHITGLLLVRDGGTGLNSSTETFRPGGGDMRDNWRSELYKYKVVEIKPLGVAPTAAKRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MNRLCIRKRFGLNILNSVKLCMSTNSTTINEEEISKFDELSKDWWSRDGPLKALHSMNALRIPMIRDKLISNGEYKTTSKPLESLKIMDIGCGGGILTEPLSRLGATVTGIDASTGNIEVAKIHLKLNPALDIEYLACPVESLVEKRKETYDALVASEVVEHVNDLPIFIKACCQLVKPGGQAFFTTINRTLLSHALAIVAGEYIFRLVPPGTHQWDMFVPPSDLKDLLEQNDMSVKMIQGMTLNPLSNTWSWIDCDQRVNLGWNTMSLISRIKPIVGLLSNANKRKALNLVAKRRMGDYAWRYRTVYVPPRWAEHLATGLGVVFWYWVMFHLYYDSGKLLGHYYPPDPSKWTDEELGIPSDDVE

Annotated regions:
Protein sequence:
METVHAYFKGVCPNCDGEISDLRLSMGAPCNLCLPVEDEKLIQDFKKEDLISFKKNILSLLKKFETLKNYEKRLFLDVEVEKLDDLFFKAFHSRLWSAQRTWARRLLSGKSFTIIAPTGMGKTVFGMFISTFLAKKGLKCYILLPTTLLVSQVSKKLLDLLESLGLDIPVATYHSMLTKKESQTEISKIMDGKFKILLTTPTFLSRKFSLLEGKKFDFLFVDDVDSFLKSSKNIDKVLMLLGFNQEIIEKTFLLIKLRSELRKLLRQKNVETEISRVREQILDLENQIRKFVSKNKLGTLVVSGASIRARKTRRIMLFRELLGFEVTSKVEVLRNIEDLYLEKGDLKLDLLKILKVLGGGGLIFVPMDKGTSFAEEVTNYLLENGVKATIYKKQKKLIDDFISGKYDVLVGVASPRSPLVRGLDLPERIRYVIFVGVPKFRISLDIKEFRPEKARILLANLREFLSEEEQAKVDKYMVNLRRYSTMLRKEEILEIVEAMKTGRKLEGFFGVVQQVFMDVSSFLEDVLEREEVKRKIKESPYLSSEVVEGKLYLIIPDSVAYVQGSGRASRMYAGRISKGLSVLLVDDEKAFKGLLKELKWFIEDLELKNFDEVDIQKILEEVDRDRENIRKIREGKITPEFKDLTKTALLVVESPNKARTIARFFGKPNRRIVDGLMVYEVNTGEYILNIAATGGHIFDLVTVEGFHGVRKVDGKFFSVYSTIKRCKKCGEQVSDEVKVCPNCGFELEDKIFVVNSLRQVAREVDVVF

Annotated regions:
phrase: ARRLLSGKSFTIIAPTGMGKTVFGMFISTFLAKKGLKCYILLPTTLLVSQVSKKLLDLLESLGLDIPVATYHSMLTKKESQTEISKIMDGKFKILLTTPTFLSRKFSLLEGKKFDFLFVDDVDSFLKSSKNIDKVLMLLGFNQEIIEKTFLLIKLRSE
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: AQRTWARRLLSGKSFTIIAPTGMGKTVFGMFISTFLAKKGLKCYILLPTTLLVSQVSKKLLDLLESLGLDIPVATYHSMLTKKESQTEISKIMDGKFKILLTTPTFLSRKFSLLEGKKFDFLFVDDVDSFLKSSKNIDKV
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: TALLVVESPNKARTIARFFGKPNRRIVDGLMVYEVNTGEYILNIAATGGHIFDLVTVEGFHGVRKVDGKFFSVYSTIKRCKKCGEQVSDEVKVCPNCGFELEDKIFVVNSLRQVAREVDVV
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: AYFKGVCPNCDGEISDLRLSMGAPCNLCLPVEDEKLIQDFKKEDL
type: DOMAIN
name: Znf_Rg
description: Reverse gyrase, zinc finger

phrase: FHSRLWSAQRTWARRLLSGKSFTIIAPTGMGKTVFGMFISTFLAKKGLKCYILLPTTLLVSQVSKKLLDLLESLGLDIPVATYHSMLTKKESQTEISKIMDGKFKILLTTPTFLSRKFSLLEGKKFDFLFVDDVDSFLKSSKNIDKVLMLLGFNQEIIEKTFLLIKLRSELRKLLRQKNVETEISRVREQ
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: CKKCGEQVSDEVKVCPNCGFE
type: DOMAIN
name: Zinc_ribbon_dom
description: Zinc-ribbon domain

phrase: TALLVVESPNKARTIARFFGKPNRRIVDGLMVYEVNTGEYILNIAATGGHIFDLVTVEGFHGVRKVDGKFFSVYSTIKRCKKCGEQVSDEVKVCPNCGFELEDKIFVVNSLRQVAREVDVV
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain
Protein sequence:
MATETPAGGPLEARISRAEPKTDASATSEPATGDTTETPAATKPSAADGQTDGASEGFGGSQLQEPEYSVNVKLSDLQADPNNPLYSIKSFEELGLHPSILQGLHSMSFRRPSKIQEKALPLLLNNPPANMIGQSQSGTGKTAAFVLNILSRLDLSPQMELAPQALVLAPSRELARQIVGVIQVMGSYVDKLKVATAVPMESNRNQKVEAPVVVGTPGTVMDLIRKRLFNPQHLKVIVLDEADNMLDQQGLGDQCIRVKGLLPKNIQVVLFSATFPDHVVRYANKFAPNANQITLKHEELTVEGIKQLYLDCDSDEHKFDILVKFYGLLTIGSSIIFVKTRASAVEIERRMVAEGHTVVSLTGGVEGQKRDEIIDKFRQGDAKVLITTNVLARGIDVQTVSMVINYDIPELHAPKATKRIADAQTYLHRIGRTGRFGRVGVAVSFVASKEEWQMLQDIKTYFNTEIQRVNTQDWDEVEEVVKTIIRSSRAGSNFQRS

Annotated regions:
phrase: LLLNNPPANMIGQSQSGTGKTAAFVLNILSRLDLSPQMELAPQALVLAPSRELARQIVGVIQVMGSYVDKLKVATAVPMESNRNQKVEAPVVVGTPGTVMDLIRKRLFNPQHLKVIVLDEADNMLDQQGLGDQCIRVKGLLPKNIQVVLFSATFPDHVVRYANKFAPNANQ
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: VEIERRMVAEGHTVVSLTGGVEGQKRDEIIDKFRQGDAKVLITTNVLARGIDVQTVSMVINYDIPELHAPKATKRIADAQTYLHRIGRTGRF
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: VLDEADNM
type: CONSERVED_SITE
name: RNA-helicase_DEAD-box_CS
description: ATP-dependent RNA helicase DEAD-box, conserved site

phrase: KSFEELGLHPSILQGLHSMSFRRPSKIQ
type: DOMAIN
name: RNA_helicase_DEAD_Q_motif
description: RNA helicase, DEAD-box type, Q motif

phrase: SFRRPSKIQEKALPLLLNNPPANMIGQSQSGTGKTAAFVLNILSRLDLSPQMELAPQALVLAPSRELARQIVGVIQVMGSYVDKLKVATAVPMESNRNQKVEAPVVVGTPGTVMDLIRKRLFNPQHLKVIVLDEADNMLDQQGLGDQCIRVKGLLPKNIQVVLFSATFPDHVVRYANKFAPNANQITLKHEELTVEGIKQ
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: KFDILVKFYGLLTIGSSIIFVKTRASAVEIERRMVAEGHTVVSLTGGVEGQKRDEIIDKFRQGDAKVLITTNVLARGIDVQTVSMVINYDIPELHAPKATKRIADAQTYLHRIGRTGRF
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: KIQEKALPLLLNNPPANMIGQSQSGTGKTAAFVLNILSRLDLSPQMELAPQALVLAPSRELARQIVGVIQVMGSYVDKLKVATAVPMESNRNQKVEAPVVVGTPGTVMDLIRKRLFNPQHLKVIVLDEADNMLDQQGLGDQCIRVKGLLPKNIQVVLFSATFPD
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: GIKQLYLDCDSDEHKFDILVKFYGLLTIGSSIIFVKTRASAVEIERRMVAEGHTVVSLTGGVEGQKRDEIIDKFRQGDAKVLITTNVLARGIDVQTVSMVINYDIPELHAPKATKRIADAQTYLHRIGRTGRFGRVGVAVSFVASKEEWQMLQDIKTYFNTEIQRVNTQDWDE
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like
Protein sequence:
MNIVLGVGGGIAAYKSALLLRLFTEAGHAVTVIPTQASTKFVGVATWEALSGRPVSNDVFHAVDQVNHVRLGHEADLIVVAPATADLLARAAGGHADDLLTTTLLMARGPVLFAPAMHTEMWQHAATQANVAALRSRGVHVLDPAVGRLTGPDTGPGRLPEPELIFAAAMALIPAHAAGTAPASVALPTTTAAGGALSGKRVLITAGGTREPLDPVRFLGNKSSGKQGVALAEAALAAGADVTVIHAHMDVAAPAGAKLQSVETALELRAATLSAAGTFDVVIMAAAVADFRPASISSGKIKKRDDTADPVINLVRNPDILVEVVAHRAAQNLKQLIVGFAAETGDDQDDALSYAEAKLQRKGCDLLVVNEVGPGDSGTERVFGQDSNQVQILALDGATPVQASGSKRTVADTVVRVIAARLSAS

Annotated regions:
phrase: MNIVLGVGGGIAAYKSALLLRLFTEAGHAVTVIPTQASTKFVGVATWEALSGRPVSNDVFHAVDQVNHVRLGHEADLIVVAPATADLLARAAGGHADDLLTTTLLMARGPVLFAPAMHTEMWQHAATQANVAALRSRGVHVLDPAVGRLTGPDTGPGRLPEP
type: DOMAIN
name: Flavoprotein
description: Flavoprotein

phrase: LSGKRVLITAGGTREPLDPVRFLGNKSSGKQGVALAEAALAAGADVTVIHAHMDVAAPAGAKLQSVETALELRAATLSAAGTFDVVIMAAAVADFRPASISSGKIKKRDDTADPVINLVRNPDILVEVVAHRAAQNLKQLIVGFAAETGDDQDDALSYAEAKLQRKGCDLLVVNEVGPGDSGTERVFGQDSNQVQ
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal
Protein sequence:
MSDDWVEIYTDGACKGNPGPGGWGALLIYKGVKRELWGGEPDTTNNRMELMAAIRALAELKRPCKVRLVTDSQYVMQGINDWMPNWKKRGWKTASKQPVKNADLWQQLDEQVNRHEVSWQWVRGHTGHPGNEQADLLANRGVVQAKRQPIV

Annotated regions:
phrase: VEIYTDGACKGNPGPGGWGALLIYKGVKRELWGGEPDTTNNRMELMAAIRALAELKRPCKVRLVTDSQYVMQGINDWMPNWKKRGWKTASKQPVKNADLWQQLDEQVNRHEVSWQWVRGHTGHPGNEQADLLANRG
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: SDDWVEIYTDGACKGNPGPGGWGALLIYKGVKRELWGGEPDTTNNRMELMAAIRALAELKRPCKVRLVTDSQYVMQGINDWMPNWKKRGWKTASKQPVKNADLWQQLDEQVNRHEVSWQWVRGHTGHPGNEQADLLANRGV
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain
Protein sequence:
MAAPQRSRTTGAPSSGGPSENERGRGGDRRGGDRRGGDRRGGDDRNQFVERVVTINRVAKVVKGGRRFSFTALVVVGDGDGTVGVGYGKAKEVPTAIAKGVEEAKKNFFRVPRIQGTIPHSVRGEAAAGVVFLRPASPGTGVIAGGPVRAVLDCAGIHDVLSKSLGSSNAINIVHATVAALQGLEEPAAVAARRGLPLEDVVPGPILRAQARGRADAAAKASTGVA

Annotated regions:
phrase: VERVVTINRVAKVVKGGRRFSFTALVVVGDGDGTVGVGYGKAKEVPTAIAKGVEEAKKNFFRV
type: DOMAIN
name: Ribosomal_uS5_N
description: Small ribosomal subunit protein uS5, N-terminal

phrase: FVERVVTINRVAKVVKGGRRFSFTALVVVGDGDGTVGVGYGKAKEVPTAIAKGVEEAKKNFFR
type: DOMAIN
name: Ribosomal_uS5_N
description: Small ribosomal subunit protein uS5, N-terminal

phrase: EAAAGVVFLRPASPGTGVIAGGPVRAVLDCAGIHDVLSKSLGSSNAINIVHATVAALQGLEEPAAVAAR
type: DOMAIN
name: Ribosomal_uS5_C
description: Small ribosomal subunit protein uS5, C-terminal

phrase: GRRFSFTALVVVGDGDGTVGVGYGKAKEVPTA
type: CONSERVED_SITE
name: Ribosomal_uS5_N_CS
description: Small ribosomal subunit protein uS5, N-terminal, conserved site
Protein sequence:
MVRIIPNRLKPSGTSTANSAANSRSASPLRSKTEPTGTEGPLDTGLALSVAILKAQDLAAKDRGGTSDPYLVLTLGDAKHVTHSVPKTLNPEWNETCRLPINGIPSLILDVCCWDKDRFGKDYLGEFDLALEEIFVNEKTEQEPRWFPLKSKRPGKKTSVVSGQVLLQFTLLDASERGLTDRQVIETFNKFVKTASEAELSLPRSASMNALSASSRSSFKAGAAPAALAPPLSRRPTDNYEDEDEDAYDDEIPAEDEDLSKPEAAEKRKRRLRIKGLKRKRRDNPYEFTNLAGDVVGIVFVEIKNITDLPPESNFTKTSFDMDPFVVASLGRKTFRTKKMHHNLNPVFNEKMIFQVQGHEQSYSFAFTVIDHDKYSGNDFIASASLPIKQFIDKAPKADPETGLYELGDLPEYVPVFQRNRFKRLGLSRSSSAHSLARPGRRTPTKTGAGSILPATGSTSTSTSASRVELDSPVPAAASAGEVPVLLNEAGAALAAVASNDRFLSATPSAGSAPVEAAGSIGTPGVSPTATTGESPLDDEQEFTTVTFPLKMKNLEKWEDKHNPMLTIRAKYMPYAALRQQFWRAMLKQYDADESGRISKVELMTMLDTLGSTLRESTIDSFFQRFASKTSGAGGVDDEFCDLTVDEVVICLEEQLDAKSKPQAAGPLGSGERTSGLLSVPSKLKLAVDDAAVSPFASRSAPPSETSETPETPALGDEADLIGRDDLSDRGEEHVVEIRECPICHQPRLNKRKDTDIVTHIATCASQD

Annotated regions:
phrase: LSVAILKAQDLAAKDRGGTSDPYLVLTLGDAKHVTHSVPKTLNPEWNETCRLPINGIPSLILDVCCWDKDRFGKDYLGEFDLALEEIFVNEKTEQEPRWFP
type: DOMAIN
name: C2_dom
description: C2 domain

phrase: IVFVEIKNITDLPPESNFTKTSFDMDPFVVASLGRKTFRTKKMHHNLNPVFNEKMIFQVQGHEQSYSFAFTVIDHDKYSGNDFIASASLPIKQFIDK
type: DOMAIN
name: C2_dom
description: C2 domain

phrase: KRRDNPYEFTNLAGDVVGIVFVEIKNITDLPPESNFTKTSFDMDPFVVASLGRKTFRTKKMHHNLNPVFNEKMIFQVQGHEQSYSFAFTVIDHDKYSGNDFIASASLPIKQFIDKAPKADP
type: DOMAIN
name: C2_dom
description: C2 domain

phrase: IVFVEIKNITDLPPESNFTKTSFDMDPFVVASLGRKTFRTKKMHHNLNPVFNEKMIFQVQGHEQSYSFAFTVIDHDKYSGNDFIASASLPIKQFIDKAPKAD
type: DOMAIN
name: C2_dom
description: C2 domain

phrase: ALSVAILKAQDLAAKDRGGTSDPYLVLTLGDAKHVTHSVPKTLNPEWNETCRLPINGIPSLILDVCCWDKDRFGKDYLGEFDLALEEIFVNEKTEQ
type: DOMAIN
name: C2_dom
description: C2 domain

phrase: LRQQFWRAMLKQYDADESGRISKVELMTMLDTLGS
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: RSASPLRSKTEPTGTEGPLDTGLALSVAILKAQDLAAKDRGGTSDPYLVLTLGDAKHVTHSVPKTLNPEWNETCRLPINGIPSLILDVCCWDKDRFGKDYLGEFDLALEEIFVNEKTEQEPRW
type: DOMAIN
name: C2_dom
description: C2 domain

phrase: RAMLKQYDADESGRISKVELMTMLDTLGSTLRESTIDSFFQRFASKTSGAGGVDDEFCD
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: DADESGRISKVE
type: BINDING_SITE
name: EF_Hand_1_Ca_BS
description: EF-Hand 1, calcium-binding site
Protein sequence:
MTEVQPPPAQSTVATADTPSLAPDTTLETSTSTELAPITTEQTIITTNAEGKKVKKIIRRKRRPARPQVDPATFKTDTPAPTGTSFNIWYNKWSGGDREDKYLSQTAAQGRCNVARDSGYTKADKTPGSYFCLFFARGICPKGVDCEYLHRLPTVTDIFPSNIDCFGRDKHSDYRDDMGGVGSFQRQNRTLYIGRIHVTDDIEEIVARHFQEWGQIERTRVLTARGVAFVTYMNEANSQFAKEAMAHQSLDHNEILNVRWATVDPNPQAAKREAHRIEEQAAEAIRKALPAAYVAELEGRDPEAKKRRKIEGSFGLQGYEAPDDVWYAKEKAEWEAAKEIEAAGGAAXPRQMIESGEDAHAHEADCAAMQVAPSGQHSQGNGIFSTSTLAALRGYTAAPAKPKVAPVAGPLVGYGSDDDSD

Annotated regions:
phrase: TLYIGRIHVTDDIEEIVARHFQEWGQIERTRVLTARGVAFVTYMNEANSQFAKEAMAHQSLDHNEILNV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: NRTLYIGRIHVTDDIEEIVARHFQEWGQIERTRVLTARGVAFVTYMNEANSQFAKEAMAHQSLDHNEILNVRWA
type: DOMAIN
name: Cwc2_RRM
description: Pre-mRNA-splicing factor Cwc2, RNA recognition motif

phrase: KRRPARPQVDPATFKTDTPAPTGTSFNIWYNKWSGGDREDKYLSQTAAQGRCNVARDSGYTKADKTPGSYFCLFFARGICPKGVDCEYLHRLPTVTDIFPSNIDCFG
type: DOMAIN
name: Torus
description: Torus domain

phrase: VARHFQEWGQIERTRVLTARGVAFVTYMNEANSQFAKEAMAHQSLDHNE
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: TPGSYFCLFFARGICPKGVDCEYLHRL
type: DOMAIN
name: Znf_CCCH
description: Zinc finger, CCCH-type

phrase: RTLYIGRIHVTDDIEEIVARHFQEWGQIERTRVLTARGVAFVTYMNEANSQFAKEAMAHQSLDHNEILNVRWAT
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain
Protein sequence:
MQETLLSRAERSVPRLSAALNDYYQLTKPRIQVLLLITTAGAMWIAGKGHVEPLLLLVTLLGGTLAASSANAFNCLIDRDIDLLMERTRRRAIPAGRILPWQAALFATALGVASFAVLAAFANLFAALLAISGIGFYVVIYTLWLKRTTTQNIVIGGAAGAIPPLVGWAAVTGDLGWSAWVLFGIIFMWTPPHFWALAMMIREDYRKAGVPMLPVVAGDEATARQIFIYTLVLVPVTLVLYPLGTMGWIYLLAAGALGLWLIEGAFRLLKAPNDRKESRSLFKRSIFYLMLLFVAMGIDSIFLFA

Annotated regions:
phrase: NCLIDRDIDLLMERTRRRAIPA
type: CONSERVED_SITE
name: UbiA_prenylTrfase_CS
description: UbiA prenyltransferase conserved site
Protein sequence:
MNLHEYQGKQLFAEYGLPVSKGIACDTPKEAVAAADEIGGDGWVVKAQVHAGGRGKAGGVKLVKSKEEIREFAEKWLGKNLVTYQTDENGQPVSKILVESLTDIDQELYLGAVVDRGSRRIVFMASTEGGVEIEKVAEETPEKILKAEIDPLVGAQPYQGRELAFKLGLEGKQIGQFTKIFLGLAKLFEECDLALVEINPLVITPAGDLHCLDAKVGVDGNALYRQKKIHEMHDPSQEDSREAEAAKWELNYVALEGNIGCMVNGAGLAMGTMDIIKLSGGQPANFLDVGGGATKERVSEAFKIILSDDAVQAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLEGNNAELGTKVLAESGLNIIAATSLADAAEQVVKAAGGK

Annotated regions:
phrase: KQLFAEYGLPVSKGIACDTPKEAVAAADEIGGDGWVVKAQVHAGGRGKAGGVKLVKSKEEIREFAEKWLGKNLVTYQTDENGQPVSKILVESLTDIDQELYLGAVVDRGSRRIVFMASTEGGVEIEKVAEETPEKILKAEIDPLVGAQPYQGRELAFKLGLEGKQIGQFTKIFLGLAKLFEECDLALVEINPLVITPAGDLHCLDAKVGVDGNALYRQKK
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold

phrase: MVNGAGLAMGTMDIIKLSGGQPANFLDVGGGATKERVSEAFKIILSDDAVQAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLEGNNAELGTKVLAESGLNIIAATSLADAAEQV
type: DOMAIN
name: SUCC_ACL_C
description: ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain

phrase: NLHEYQGKQLFAEYGLPVSKGIACDTPKEAVAAADEIGGDGWVVKAQVHAGGRGKAGGVKLVKSKEEIREFAEKWLGKNLVTYQTDENGQPVSKILVESLTDIDQELYLGAVVDRGSRRIVFMASTEGGVEIEKVAEETPEKILKAEIDPLVGAQPYQGRELAFKLGLEGKQIGQFTKIFLGLAKLFEECDLALVEINPLV
type: DOMAIN
name: ATP-grasp_succ-CoA_synth-type
description: ATP-grasp fold, succinyl-CoA synthetase-type

phrase: GNIGCMVNGAGLAMGTMDIIKLSG
type: CONSERVED_SITE
name: Succ-CoA_synthase_bsu_CS
description: Succinyl-CoA synthetase, beta subunit, conserved site
Protein sequence:
MKVFCGRANPTTGSLEWLEEDEHYDYHQEIARSSYADMLHDKDRNIKYYQGIRAAVSRVKDRGQKALVLDIGTGTGLLSMMAVTAGADFCYAIEVFKPMADAAVKIVEKNGFSDKIKVINKHSTEVTVGPDGDLPCRANILVTELFDTELIGEGALPSYEHAHRHLVQENCEAVPHKATVYAQLVESRRMWSWNKLFPVHVQTSLGEQVIVPPSELERCPGAPSVYDIQLNQVPSTDFTALSDVLPMFSVDFSKQVSSSAACHSKQFVPLASGQAQVVLSWWDIEMDPEGKITCTMAPFWAQTNPQELQWRDHWMQCVYFLPQEEPVVQGSPRCLVAHHDDYCVWYSLQRTSADENEEVYQVRPVCDCQAHLLWNRPRFGEINDQDRTDQYAQALRTVLMPGTICLCVSDGSLLSLLAHHLGAEQVFTVESSAASYRLMKRIFKANHLEDKVSIIKKRPELLTSADLEGKKVSLLLGEPFFATSLLPWHNLYFWYARTSVDQHLEPGAVVMPQAASLYAMIVEFRDLWRIRSPCGDCEGFDVHIMDDMIKHSLDFRESREAEPHPLWEYPCRSLSEPQQILTFDFQQPVPQKPVHAEGSMELRRPGKSHGAVLWMEYHLTPDSTVSTGLMNPLEDKGDCCWNPHCKQAVYFLSTTVDPRVPLDGPQSVSYAVEFHPLTGDITMEFRLADTLN

Annotated regions:
phrase: AASLYAMIVEFRDLWRIRSPCGDCEGFDVHIMDDMIKHSLDFRESREAEPHPLWEYPCRSLSEPQQILTFDFQQPVPQKPVHAEGSMELRRPGKSHGAVLWMEYHLTPDSTVSTGLMNPLEDKGDCCWNPHCKQAVYFLSTTVDPRVPLDGPQSVSYAVEFHPLTGDITMEFRLA
type: DOMAIN
name: PRMT_dom
description: Protein arginine N-methyltransferase domain

phrase: HKATVYAQLVESRRMWSWNKLFPVHVQTSLGEQVIVPPSELERCPGAPSVYDIQLNQVPSTDFTALSDVLPMFSVDFSKQVSSSAACHSKQFVPLASGQAQVVLSWWDIEMDPEGKITCTMAPFWAQTNPQELQWRDHWMQCVYFLPQEEPVVQGSPRCLVAHHDDYCVWYSL
type: DOMAIN
name: PRMT_dom
description: Protein arginine N-methyltransferase domain
Protein sequence:
MGANGDVALSRIGATRPALSAWRFVTVFGVVGLLADVVYEGARSITGPLLASLGATGLVVGVVTGVGEAAALGLRLVSGPLADRSRRFWAWTIAGYTLTVVTVPLLGIAGALWVACALVIAERVGKAVRGPAKDTLLSHAASVTGRGRGFAVHEALDQVGAMIGPLTVAGMLAITGNAYAPALGVLTLPGGAALALLLWLQRRVPRPESYEDCPVVLGNPSAPRPWALPAQFWLYCGFTAITMLGFGTFGLLSFHMVSHGVLAAAMVPVVYAAAMAADALTALASGFSYDRYGAKTLAVLPILSILVVLFAFTDNVTMVVIGTLVWGAAVGIQESTLRGVVADLVASPRRASAYGVFAAGLGAATAGGGALIGWLYDISIGTLVVVVIALELMALVMMFAIRLPRVAPS

Annotated regions:
Protein sequence:
MKFIVRLHAEITIKSKSVRQRHLKVLTGNIRTLLKPLHDSMRVRNHWDRIEVHHDDLPELTALTIRHLGQIPGIAYFEQVVEHPLTDFETLLEWILPLQTDRLQNKSFAVRVKRKGKHEFSSMDMAIYLGGGIRARVPGTHVQLKNPQEEIVIHVIEQQVSLVQQRFAGLGGFPLPTQETVVSLMSGGFDSAVASFQMIRRGARTHFCFFNLGADAHEAAVREISYFLWEKYSKTHAVKFVAVDFSEVVERILEAGDQGSLGVLLKRAMMRASGLVAERLNAQAIVTGEAVGQVSSQTLSNLKLIDQATDTLILRPLIVQDKQTIVDCAREIGVETLSAAVPEYCGVISKQPSVKVKPEVIAASEQAVLPDSLIQAVVAQCRVIDIRDAHATKNPAIGPKVLDANDEVPVDAIIIDIRRDEEQEEAPLDVPGHKVLHIPFFRLASKQDMLDKSKSYLLYCEQGVMSRLQAIHLQEQGFSQVAVYEK

Annotated regions:
phrase: IVRLHAEITIKSKSVRQRHLKVLTGNIRTLLKPLHDSMRVRNHWDRIEVHHDDLPELTALTIRHLGQIPGIAYFEQVVEHPLTDFETLLEWILPLQTDRLQNKSFAVRVKRKGKHEFSSMDMAIYLGGGIRARVPGTHVQLKNPQEEIVIHVIEQQVSLVQQRFAGLGGFPLPTQETVVSLMSGGFDSAVASFQMIRRGARTHFCFFNLGADAHEAAVREISYFLWEKYSKTHAVKFVAVDFSEVVERILEAGDQGSLGVLLKRAMMRASGLVAERLNAQAIVTGEAVGQVSSQTLSNLKLIDQATDTLILRPLIVQDKQTIVDCAREIGVETLSAAVPEYCGVISKQPSVKVKPEVIAASEQA
type: DOMAIN
name: ThiI_N
description: ThiI, N-terminal

phrase: YFEQVVEHPLTDFETLLEWILPLQTDRLQNKSFAVRVKRKGKHEFSSMDMAIYLGGGIRARVPGTHVQLKNPQEEIVIHVIEQQVSLVQQ
type: DOMAIN
name: THUMP_dom
description: THUMP domain

phrase: FIVRLHAEITIKSKSVRQRHLKVLTGNIRTLLKPLHDSMRVRNHWDRIEVHHDDLPELTALTIRHLGQIPGIAY
type: DOMAIN
name: ThiI_fer
description: ThiI, ferredoxin-like domain

phrase: ALTIRHLGQIPGIAYFEQVVEHPLTDFETLLEWILPLQTDRLQNKSFAVRVKRKGKHEFSSMDMAIYLGGGIRARVPGTHVQLKNPQEEIVIHVIEQQVSLVQQ
type: DOMAIN
name: THUMP_dom
description: THUMP domain

phrase: DANDEVPVDAIIIDIRRDEEQEEAPLDVPGHKVLHIPFFRLASKQDMLDKSKSYLLYCEQGVMSRLQAIHLQEQGFSQVAVY
type: DOMAIN
name: THII_Thiazole_biosynth_dom
description: ThiI, thiazole biosynthesis domain

phrase: TQETVVSLMSGGFDSAVASFQMIRRGARTHFCFFNLGADAHEAAVREISYFLWEKYSKTHAVKFVAVDFSEVVERILEAGDQGSLGVLLKRAMMRASGLVAERLNAQAIVTGEAVGQVSSQTLSNLKLIDQATDTLILRPLIVQDKQTIVDCAREIGVETLSAAVPEYCGVISKQPSVKVKPEVIAASEQ
type: DOMAIN
name: ThiI_AANH
description: Thil, AANH domain

phrase: TDFETLLEWILPLQTDRLQNKSFAVRVKRKGKHEFSSMDMAIYLGGGIRARVPGTHVQLKNPQEEIVIHVIEQQVS
type: DOMAIN
name: THUMP_dom
description: THUMP domain

phrase: KFIVRLHAEITIKSKSVRQRHLKVLTGNIRTLLKPLHDSMRVRNHWDRIEVHHDDLPELTALTIRHLGQIPGIAYFEQVVEHPLTDFETLLEWILPLQTDRLQNKSFAVRVKRKGKHEFSSMDMAIYLGGGIRARVPGTHVQLKNPQEEIVIHVIEQQVSLVQQRFAGL
type: DOMAIN
name: THUMP_ThiI
description: ThiI, THUMP domain

phrase: DAIIIDIRRDEEQEEAPLDVPGHKVLHIPFFRLASKQDMLDKSKSYLLYCEQGVMSRLQAIHLQEQGFSQVAVY
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain
Protein sequence:
MGGKWSKRSVPGWSEIRERMRRTPPTPPAAAGVGAVSRDLEKHGAITSSNTPATXADCAWVEAQEEGDEVGFPVRPQVPLRPMTYKGALDLSHFLKEKGGLDGLIYSQQRQDILDLWVYNTQGYFPDWQNYTPGPGTRFPLTFGWCFKLVPVDPEEVEKANEGENNCLLHPINQHGIDDPEKEVLQWKFDSRLAFHHMAREKHPEFYKDC

Annotated regions:
Protein sequence:
MFEKAVYPALEELQQPLSQEQFRILKDQLNSEEPTPSAQTKFNYAWGLIKSNHHKQQEYGVQILTELYKSEKSMRREVLYYLSLGSLKIGDYTNAKRYVEALLEIEPENQQARGLLKTIDDKITTEGLIGIGIAGGALAVGLGLIGALVRKNRK

Annotated regions:
phrase: QTKFNYAWGLIKSNHHKQQEYGVQILTELYKS
type: REPEAT
name: Fis1_TPR_N
description: Fis1, N-terminal tetratricopeptide repeat

phrase: REVLYYLSLGSLKIGDYTNAKRYVEALLEIEPE
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: PLSQEQFRILKDQLNSEEPTPSAQTKFNYAWGLIKSNHHKQQEYGVQILTELYKSEKSMRREVLYYLSLGSLKIGDYTNAKRYVEALLEIEPENQQARGLLKTIDDKITT
type: DOMAIN
name: Fis1_cytosol
description: Mitochondria fission protein Fis1, cytosolic domain

phrase: REVLYYLSLGSLKIGDYTNAKRYVEALLEIEPENQQARGLLKTIDDKITTEG
type: REPEAT
name: Fis1_TPR_C
description: Fis1, C-terminal tetratricopeptide repeat
Protein sequence:
MELQGKRIALGVTGGVAAYKAAELVRLLLKQGATVQVAMTDAATHFVTPVTFQALSGQPVFTDQWDARIGNNMAHIDLSREADALLVAPASADFLAKVAHGLADDLLSTLVLARDCPLLVAPAMNRQMWENPATRRNVATLRADGVAVLGPGCGDQACGETGLGRMLEPEEIVAELIAHFQPKPLKGRRLLLTAGPTFEAIDPVRGITNLSTGKMGYAIARAAHEAGAEVTLVSGPVALPCPYGVTRIDVTSALQMRDAVLAQTAGSDVFVAVAAVADYRPAAPAEQKIKKDGGTPPAIELTLNPDILAEVAALPHPPLCVGFAAESQKLDEYAEKKRRAKKIPLIVGNLIQNGFGGDDNTLVLFDDDGRHPLPPASKIDLARRLVAHIATLLEKN

Annotated regions:
phrase: LKGRRLLLTAGPTFEAIDPVRGITNLSTGKMGYAIARAAHEAGAEVTLVSGPVALPCPYGVTRIDVTSALQMRDAVLAQTAGSDVFVAVAAVADYRPAAPAEQKIKKDGGTPPAIELTLNPDILAEVAALPHPPLCVGFAAESQKLDEYAEKKRRAKKIPLIVGNLIQNGFGGDDNTLV
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal

phrase: KRIALGVTGGVAAYKAAELVRLLLKQGATVQVAMTDAATHFVTPVTFQALSGQPVFTDQWDARIGNNMAHIDLSREADALLVAPASADFLAKVAHGLADDLLSTLVLARDCPLLVAPAMNRQMWENPATRRNVATLRADGVAVLGPGCGDQACGETGLGRMLEPEEIVAELIA
type: DOMAIN
name: Flavoprotein
description: Flavoprotein
Protein sequence:
MHLLTTIAALRCYLHQRRRDTQQCPNSIGLVPTMGALHLGHLSLIQKAREENYTVVVSIFINPLQFGPLEDYQRYPRTWEGDKLFCEQAGVDAIFAPSPEEMGISRKNIQENQVTQVLPASGMINGLCASYRPGHFQGVTTIVTKLFNVVQPDRAYFGKKDGQQLAIIKRLVADLNFPIEIIACPTVREASGLALSSRNQYLTDIEKEQAALLYQGLVQAEIAFRSGVRYSDQLLRIVQAEIAKSRNIQVEYIELVEPSTLMPLNEIQKEGMLAIAAHIGNTRLIDNTILSDVKTTPRQPIIAIDGPAGAGKSTVAKQVATRLRLVHLDTGAMYRAITWLVLQTSTDPEDEQAIAHLVRECKIELIATENPENPLEVWINNHNVTGEIRSGEVTAKVSVVSGQSAVRQFLVREQQKWGEKGGLVAEGRDIGTDVFPNAEVKIFLTASVEERARRRQQDFIKQGRGEISLEQLQREIQERDEKDSTREISPLRKASDALEIISDGFTAEEVTEKIVDCYYRIQLHSAD

Annotated regions:
phrase: IIAIDGPAGAGKSTVAKQVATRLRLVHLDTGAMYRAITWLVLQTSTDPEDEQAIAHLVRECKIELIATENPENPLEVWINNHNVTGEIRSGEVTAKVSVVSGQSAVRQFLVREQQKWGEKGGLVAEGRDIGTDVFPNAEVKIFLTASVEERARRRQQDFIKQGRGEISLEQLQREIQERDEKDSTREISPLRKASDALE
type: DOMAIN
name: Cytidylate_kinase_dom
description: Cytidylate kinase domain

phrase: IAIDGPAGAGKSTVAKQVATRLRLVHLDTGAMYRAITWLVLQTSTDPEDEQAIAHLVRECKIELIATENPENPLEVWINNHNVTGEIRSGEVTAKVSVVSGQSAVRQFLVREQQKWGEKGGLVAEGRDIGTDVFPNAEVKIFLTASVEERARRRQQDFIKQGRGEISLEQLQREIQERDEKDSTREISPLRKASDALEIISDGFTAEEVTEKIVD
type: DOMAIN
name: Cytidylate_kinase_dom
description: Cytidylate kinase domain
Protein sequence:
MSYNSFGHLFRVTTWGESHGPAIGCVVDGVPPRIPLSEADIQPFLDRRRPGQSRFTTQRREPDIVRILSGVHGGVTTGTPVALQIENTDQRSQDYANIADRFRPGHADIAYHWKYGVRDPRGGGRSSARETATRVAAGAIARKILGERVRIRGALVQMGRHAIDRARFDWDEVDRNAFFCPDPEAAKAWAEELDAVRKAGSSLGAVVEVVAEGISPGLGAPVYAKLDADLAAAMMSINAVKGVEIGDGFAAAALRGEENADEMRMNEDGTVRFLANHAGGVLGGISTGQPVIVRFAVKPTSSILTPVHSVDSDGDEVDIQTKGRHDPCVGIRAVPVGEAMMACVLADQLLLHRAQCGETGAGRLPLAKK

Annotated regions:
phrase: GRSSARETATRVAAGA
type: CONSERVED_SITE
name: Chorismate_synthase_CS
description: Chorismate synthase, conserved site

phrase: GESHGPAIGCVVDGV
type: CONSERVED_SITE
name: Chorismate_synthase_CS
description: Chorismate synthase, conserved site

phrase: RHDPCVGIRAVPVGEA
type: CONSERVED_SITE
name: Chorismate_synthase_CS
description: Chorismate synthase, conserved site
Protein sequence:
MPVSTTLLQSDLPGLPLRHRGKVRDVFDIPRDRLPADAPPGDYLLMVATDRLSAFDVVLPDPIPGKGEMLCQVSNFWFHKTEHLMPNHLVDIRVEQVLPEGVDPALYAKRAVVTRKLKPVPVEAIARGYVIGSGWKDYQRTGKISGIELPDGLRQAEKLPEPIFTPSTKAAVGDHDENIDFDAMVKTVGAELAERVRDATLRIYRFAADFAAERGILLADTKFEFGTDADGRLYIMDEMLTPDSSRYWPADQYEPGTSPPSYDKQFVRDYLETLDWGKTAPGPRLPADVIDRTRAKYAEALQRLAGISVD

Annotated regions:
phrase: LADTKFEF
type: CONSERVED_SITE
name: SAICAR_synthetase_CS
description: SAICAR synthetase, conserved site

phrase: LPLRHRGKVRDVFDIPRDRLPADAPPGDYLLMVATDRLSAFDVVLPDPIPGKGEMLCQVSNFWFHKTEHLMPNHLVDIRVEQVLPEGVDPALYAKRAVVTRKLKPVPVEAIARGYVIGSGWKDYQRTGKISGIELPDGLRQAEKLPEPIFTPSTKAAVGDHDENIDFDAMVKTVGAELAERVRDATLRIYRFAADFAAERGILLADTKFEFGTDADGRLYIMDEMLTPDSSRYWPADQYEPGTSPPSYDKQFVRDYLETLDWGKTAPGPRLPADVIDRTRAKYAEALQRLA
type: DOMAIN
name: SAICAR_synt/ADE2_N
description: SAICAR synthetase/ADE2, N-terminal

phrase: HRGKVRDVFDIPRDRLPADAPPGDYLLMVATDRLSAFDVVLPDPIPGKGEMLCQVSNFWFHKTEHLMPNHLVDIRVEQVLPEGVDPALYAKRAVVTRKLKPVPVEAIARGYVIGSGWKDYQRTGKISGIELPDGLRQAEKLPEPIFTPSTKAAVGDHDENIDFDAMVKTVGAELAERVRDATLRIYRFAADFAAERGILLADTKFEFGTDADGRLYIMDEMLTPDSSRYWPADQYEPGTSPPSYDKQFVRDYLETLD
type: DOMAIN
name: SAICAR_synt/ADE2_N
description: SAICAR synthetase/ADE2, N-terminal

phrase: PVPVEAIARGYVIG
type: CONSERVED_SITE
name: SAICAR_synthetase_CS
description: SAICAR synthetase, conserved site