nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MQPTDPNKFTEKAWEAIAKTPEIAKQHRQQQIETEHLLSALLEQNGLATSIFNKAGASIPRVNDQVNSFIAQQPKLSNPSESIYLGRSLDKLLDNAEIAKSKYGDDYISIEHLMAAYGQDDRLGKNLYREIGLTENKLAEIIKQIRGTQKVTDQNPEGKYESLEKYGRDLTELAREGKLDPVIGRDEEVRRTIQILSRRTKNNPVLIGEPGVGKTAIAEGLAQRIINHDVPESLRDRKLISLDMGALIAGAKYRGEFEERLKAVLKEVTDSQGQIILFIDEIHTVVGAGATQGAMDAGNLLKPMLARGALRCIGATTLDEYRKYIEKDAALERRFQEVLVDEPNVLDTISILRGLKERYEVHHGVKIADSALVAAAMLSNRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEVDRKILQLEMERLSLQRENDSASKERLEKLEKELADFKEEQSKLNGQWQSEKTVIDQIRTVKETIDQVNLEIQQAQRDYDYNKAAELQYGKLTDLQRQVEALETQLAEQQTSGKSLLREEVLESDIAEIISKWTGIPISKLVESEKEKLLHLEDELHSRVIGQDEAVTAVAEAIQRSRAGLSDPNRPTASFIFLGPTGVGKTELAKALAKNLFDTEEALVRIDMSEYMEKHAVSRLMGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHGDVFNVMLQILDDGRLTDAQGHVVDFKNTIIIMTSNLGSQYILDVAGDDSRYEEMRSRVMDVMRENFRPEFLNRVDETI

Annotated regions:
phrase: DAGNLLKPMLAR
type: CONSERVED_SITE
name: ClpA/B_CS1
description: ClpA/B, conserved site 1

phrase: PNKFTEKAWEAIAKTPEIAKQHRQQQIETEHLLSALLEQNGLATSIFNKAGASIPRVNDQVNSFIAQQPKLSNPSESIYLGRSLDKLLDNAEIAKSKYGDDYISIEHLMAAYGQDDRLGKNLYREIGLTENKLAEIIKQIRG
type: DOMAIN
name: Clp_R_dom
description: Clp, repeat (R) domain

phrase: TKNNPVLIGEPGVGKTAIAEGLAQRIINHDVPESLRDRKLISLDMGALIAGAKYRGEFEERLKAVLKEVTDSQGQIILFIDEIHTVVGAGATQGAMDAGNLLKPMLARGALRCIGATTLDEYRKYIEKDAALERRFQEVLVDEPNV
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: PTASFIFLGPTGVGKTELAKALAKNLFDTEEALVRIDMSEYMEKHAVSRLMGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHGDVFNVMLQILDDGRLTDAQGHVVDFKNTIIIMTSNLGSQYILDVAGDDSRYEEMRSRVMDVMRENFRP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: RIDMSEYMEKHAVSRLMG
type: CONSERVED_SITE
name: ClpA/B_CS2
description: ClpA/B, conserved site 2

phrase: DTISILRGLKERYEVHHGVKIADSALVAAAMLSNRYISDRFLPDKAIDLVDEAAAKLKMEITSKPEELDEVDRKILQLEMERLSLQRENDSASKERLEK
type: DOMAIN
name: ClpA/ClpB_AAA_lid
description: ClpA/ClpB, AAA lid domain

phrase: KSKYGDDYISIEHLMAAYGQDDRLGKNLYREIGLTENKLAEIIKQIR
type: DOMAIN
name: Clp_R_dom
description: Clp, repeat (R) domain

phrase: EIAKQHRQQQIETEHLLSALLEQNGLATSIFNKAGASIPRVNDQVNSF
type: DOMAIN
name: Clp_R_dom
description: Clp, repeat (R) domain

phrase: VLIGEPGVGKTAIAEGLAQRIINHDVPESLRDRKLISLDMGALIAGAKYRGEFEERLKAVLKEVTDSQGQIILFIDEIHTVVGAGATQGAMDAGNLLKPMLARGALRCIGATT
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: RPTASFIFLGPTGVGKTELAKALAKNLFDTEEALVRIDMSEYMEKHAVSRLMGAPPGYVGYEEGGQLTEAIRRRPYSVILFDEIEKAHGDVFNVMLQILDDGRLTDAQGHVVDFKNTIIIMTSNLGSQYILDVAGDDSRYEEMRSRVMDVMRENFRPEFLNRVD
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core
Protein sequence:
MNPNFLDFEQPIADLQAKIEELRLVGNDNSLNIGDEISRLQDKSKTLTESIFGNLTSWQIARMARHPRRPYTLDYIENIFTEFDELHGDRHFSDDAAIVGGIARLDNQPVMIIGHQKGREVREKVRRNFGMPRPEGYRKACRLMEMAERFKMPILTFIDTPGAYPGIDAEERNQSEAIAWNLRVMARLKTPIIATVIGEGGSGGALAIGVCDQLNMLQYSTYAVISPEGCASILWKTAEKAPDAAEAMGITADRLKGLGIVDKVIAEPLGGAHRDPVAAAALIREELSSQLAMLKAFDNDALLARRYDRLMSYGL

Annotated regions:
phrase: LQDKSKTLTESIFGNLTSWQIARMARHPRRPYTLDYIENIFTEFDELHGDRHFSDDAAIVGGIARLDNQPVMIIGHQKGREVREKVRRNFGMPRPEGYRKACRLMEMAERFKMPILTFIDTPGAYPGIDAEERNQSEAIAWNLRVMARLKTPIIATVIGEGGSGGALAIGVCDQLNMLQYSTYAVISPEGCASILWKTAEKAPDAAEAMGITADRLKGLGIVDKVIAEPLGGAHRDPVAAAALIREELSSQLA
type: DOMAIN
name: COA_CT_C
description: Acetyl-coenzyme A carboxyltransferase, C-terminal
Protein sequence:
MDQHHGARGGAPIRRPRRSIESRSHPFRATGNTQRTYSTPRLSYRDGLSGRTASRDPQEQASNQDESSNPSTSNAQQSTSFWGYLRRVFSDDVPAQPQAPRPRADFAPPAGEESSSEEEEEEGPAQAPLDEEDQLMYADQYSVGDSSDENDEEEDPRLGSDYPTSAESSEYHDHGEMVAGAGAESESETDIDAEEEEEDDEDDEDDMEVIRDESYRLPRTWLDKSIRLMDEALAQSSELSKAITKSTRSLYDSQFAPGGRGYTQTATPSRRLVQLSRAGMYDSDKIVMTGDYMEVDDDPDSAYQLWVRAIRHPLAMNPSWEETISNHTNPSFSTDIDYDIDELIEKNLARTPPVFEGLLDSAEFFYKLPMLYTYATITQDEAYEERLAWSNTQALHGHEQSSWQALLVYYSRGGMYVSPTQEPRGIWRRALKQAMALQLKMCVLGLSDVVTKQNATHHHTAVTFLVDALLRTARNCYLASRLLVFAWERRRETGAKRPAEPLIALSGVTLLQPLPPEVSELLEQRTFDIGLRTPNSAVFRAFFGSLVYWAELRLALRDPASINCRYVGFHLQTSEIYLLARAHSASPGYTKEELVAMEAILTLATLMLEVALQWVHVACAQLLSENDTIKAFRRVSASIPHALAPLGSIRLHDAEFEVLSNPDVMVARDETALSQALFLGYFSVRTALTACMRDYSHEADGGSKETVTGVFLGVGLILQRLAGHLNFLLNCLAGAALYGGQKINIHSLTLPRYSLLADVMAPMLQRQS

Annotated regions:
Protein sequence:
MAMASASSSSSSISVIIFLLLAPLCLSREPPSQIPNGTLDLSLLWYGQFTPTQKERVHDFIESLNFDAKEGLDPKVSAWWKVVESYQERFEVKDIYRQKKSNRTVAPRIKVKVVRSYVDEKMKYGKELTMGNGEKLVETAIGNMSKVVPVVLLSAQVRAHGVGFCDGTCQHNALAKIKGQKEPRRYIMVSNPEVECPGECAWPFHTADKGPRGMTYQPASGEVGADALVIQLATGLADLATNPDLTKSLFKSETTPYNDDVKKNHESSSMYIVDPATKCTRVFGSGAFPGFTGRIRVDPITGGAFNSHGINHLKFLIPSIWDPKTKSCWTPM

Annotated regions:
Protein sequence:
MKESEGIDVKLMDIVRFDKNGLIPAITQDYETGKVLMLAYMNKESLEVTLKERKACYWSRSRQELWLKGATSGNFQEVMQISIDCDADAILLKVKQKGGACHVGYYSCFYRQVENDNSSLSICDKLVFDAEEVYGKSNKK

Annotated regions:
phrase: MLAYMNKESLEVTLKERKACYWSRSRQELWLKGATSGNFQEVMQISIDCDADAILLKVKQKGGACHVGYYSCF
type: DOMAIN
name: PRib_AMP_CycHydrolase_dom
description: Phosphoribosyl-AMP cyclohydrolase domain
Protein sequence:
MASFINNPLTSLCNTKSERNNLFKISLYEAQSLGFSKLNGSRKVAFPSVVCKAVSVPTKSSTEIEGLNIAEDVTQLIGNTPMVYLNTIAKGCVANIAAKLEIMEPCCSVKDRIGFSMIVDAEEKGLISPGKTVLVEPTSGNTGIGLAFIAASRGYKLILTMPASMSLERRVILKAFGAELVLTDPAKGMKGAVSKAEEILNNTPDAYILQQFDNPANPKIHYETTGPEIWEDTKGKIDILVAGIGTGGTITGTGRFLKEQNPNIKIIGVEPTESNVLSGGKPGPHKIQGIGAGFIPGNLDQDVMDEVIEISSDEAVETARTLALQEGLLVGISSGAAALAAIQVGKRPENAGKLIGVVFPSYGERYLSSILFQSIREECEKMKPEL

Annotated regions:
phrase: KLEIMEPCCSVKDRIGFS
type: BINDING_SITE
name: P-phosphate_BS
description: Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site

phrase: VTQLIGNTPMVYLNTIAKGCVANIAAKLEIMEPCCSVKDRIGFSMIVDAEEKGLISPGKTVLVEPTSGNTGIGLAFIAASRGYKLILTMPASMSLERRVILKAFGAELVLTDPAKGMKGAVSKAEEILNNTPDAYILQQFDNPANPKIHYETTGPEIWEDTKGKIDILVAGIGTGGTITGTGRFLKEQNPNIKIIGVEPTESNVLSGGKPGPHKIQGIGAGFIPGNLDQDVMDEVIEISSDEAVETARTLALQEGLLVGISSGAAALAAIQVGKRPENAGKLIGVV
type: DOMAIN
name: TrpB-like_PALP
description: Tryptophan synthase beta chain-like, PALP domain
Protein sequence:
MTILAIVIFLLTLIFVIWQPKGLDIGITALIGAVVAIITGVVSFSDVLEVTGIVWNATLTFVAVILISLILDEIGFFEWSAIHMVKASNGNGLKMFVFIMLLGAIVAAFFANDGAALILTPIVLAMVRNLGFNKKVIFPFIIASGFIADTTSLPLIVSNLVNIVSADYFDIGFIEYFSRMIIPNIFSLIASILVLWLYFRKSIPKTFNTENLSDPKNVIKDPKLFKLSWIVLAILLVGYLVSEFIQIPVSIIAGIIALIFVILARKSKAVHTKQVIKGAPWNIVVFSIGMYLVVFGLKNVGITTILGDILTNISSYGLFSSIMGMGFIAAFLSSIMNNMPTVLIDAIAIGQSSATGILKEGMVYANVIGSDLGPKITPIGSLATLLWLHVLTQKGVKISWGTYFKTGIIITIPVLFVTLLGLYLTLIIF

Annotated regions:
Protein sequence:
MSEFKLNTIEEALEDIRKGKVIIVVDDEDRENEGDFITAAANATPEVINFMATHGRGLICTAITEQKAKELQLDMMVSANTSTHETAFTVSIDLLGFGCTTGISASDRSKTILALIDPTKKASDFGRPGHIFPLKAKEAGVLRRTGHTEATIDLARLAGFDPCGALVEIMNEDGSMARLPDLVKIAKRFDLKIITIKDLISYRLAKETIVERVVEVKMPTVWGDFELIAYKVHTNGQEHMALVKGKWEKDEPILVRVHSSCVTGDVFGSCRCDCGPQLHAAMEMIEKAGKGVIVYMNQEGRGIGLLNKLKAYKLQENGRDTVEANIELGFKMDERDYGIGAQILRDLGLNKIKLLTNNPKKRAGLIGYGLEIVENLPIIIESNPHNAKYLQTKKEKMGHSF

Annotated regions:
phrase: ERVVEVKMPTVWGDFELIAYKVHTNGQEHMALVKGKWEKDEPILVRVHSSCVTGDVFGSCRCDCGPQLHAAMEMIEKAGKGVIVYMNQEGRGIGLLNKLKAYKLQENGRDTVEANIELGFKMDERDYGIGAQILRDLGLNKIKLLTNNPKKRAGLIGYGLEIVENL
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MAKKEHVELVPIFDDNYVFILTDDATQKAVAVDPGDAGPVIDFLRANKLDLAAILLTHHHSDHIGGVGELKAAFDCPVYAPQKNQKQIPVADQWLKEGDSVTCGPWDFTVMELPGHTLGHIAYWNQKHKWLFSGDVIFGLGCGRLFEGTFEQGYESLQRIKKLPPQTLIYCTHEYTKSNLEFCRILTNQDNTPITGDSEALELYANELSNRRELNLPSVPLKLSIEESVNPFLLARDVEQFRYLRELRNRQ

Annotated regions:
phrase: VPIFDDNYVFILTDDATQKAVAVDPGDAGPVIDFLRANKLDLAAILLTHHHSDHIGGVGELKAAFDCPVYAPQKNQKQIPVADQWLKEGDSVTCGPWDFTVMELPGHTLGHIAYWNQKHKWLFSGDVIFGLGCGRLFEGTFEQGYESLQRIKKLPPQTLIYCT
type: DOMAIN
name: Clx_II_MBL
description: Hydroxyacylglutathione hydrolase, MBL domain

phrase: EYTKSNLEFCRILTNQDNTPITGDSEALELYANELSNRRELNLPSVPLKLSIEESVNPFLLARDVEQFRYLRELRN
type: DOMAIN
name: HAGH_C
description: Hydroxyacylglutathione hydrolase, C-terminal domain

phrase: DNYVFILTDDATQKAVAVDPGDAGPVIDFLRANKLDLAAILLTHHHSDHIGGVGELKAAFDCPVYAPQKNQKQIPVADQWLKEGDSVTCGPWDFTVMELPGHTLGHIAYWNQKHKWLFSGDVIFGLGCGRLFEGTFEQGYESLQRIKKLPPQTLIYCT
type: DOMAIN
name: Metallo-B-lactamas
description: Metallo-beta-lactamase

phrase: TQKAVAVDPGDAGPVIDFLRANKLDLAAILLTHHHSDHIGGVGELKAAFDCPVYAPQKNQKQIPVADQWLKEGDSVTCGPWDFTVMELPGHTLGHIAYWNQKHKWLFSGDVIFGLGCGRLFEGTFEQGYESLQRIKKLPPQTLIYCT
type: DOMAIN
name: Metallo-B-lactamas
description: Metallo-beta-lactamase
Protein sequence:
MKERIKDKAWRPQFIKLNNPDTSKKIVSQKSKKPEIVDLSSPGNNDLVTISILCVLLCFQLAISLNPHSGESQPPMYGDYEAQRHWMEITVNLPIEQWYLNGTHNDLLYWGLDYPPITAYHHYLLGVISNKINKKWVELTTSRGYESIAHKLFMRLSAIIPFYIFYLPPLIFYFTRSKKMSPILYALALLYPSLLVIDNGHFQYNSISLGLFLATYMFLTKNFTIIGSILFVAALNYKQMELYHALPVFVFILARSINKTQLFNSFRRILTIGLFVVGTFLIIWLPFLLTGTAKDVIIRVFPFNRGLYEDKVASFWCAFSFILKRLPLQSVQIYISTALVLAGSAPSLLVLFLRPTEKQFRISLTATGLSFFLFSFHVHEKTILLAAVPALLLISEYTSLVIWFLNITNISIFSLCVKDNFALSLSFFFAYFVVSYAYTAPRKISHILTILIGFAICILELYGPSNQRFPHIYQLANAFFSCVHFIYFLLYLSFASFEKTKKE

Annotated regions:
Protein sequence:
MWPGSERGSSRALEIPTSQQNAGGSSQQETLADIEHISTIAGSLASIGSLSHTQMRYQCTNDAGYDTEHTSLNSDFDEAELRRELLRDKWKLLFDMFDPEGFGEISVEEFLEALKSPEFLSQVPMNKRELLLERAKKAKLPTGPGYVTFQDFVNVMSGKRTRSFKCAVHHRDREVCSENDFQLVLNEPPLFRKMVHAVAMEILPEERDRKYYADRYTCCPPPFFIILVTLVELGFFVYHSVVTGEAAPRGPIPSDSMFIYRPDKRHEIWRFLFYMVLHAGWLHLGFNVAVQLVFGLPLEMVHGSTRIACIYFSGVLAGSLGTSIFDPDVFLVGASGGVYALLAAHLANVLLNYHQMRYGVIKLLHILVFVSFDFGFAIYARYAGDELQLGSSSEFLAIDQAETAGAVSYVAHLAGAIAGLTIGLLVLKSFEQKLHEQLLWWIALGTYLALVVFAIAFNIMNGFAMFNIRVEKIRVTETIFNDFQV

Annotated regions:
phrase: LLRDKWKLLFDMFDPEGFGEISVEEFLEALKSPEF
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: HEIWRFLFYMVLHAGWLHLGFNVAVQLVFGLPLEMVHGSTRIACIYFSGVLAGSLGTSIFDPDVFLVGASGGVYALLAAHLANVLLNYHQMRYGVIKLLHILVFVSFDFGFAIYARYAGDELQLGSSSEFLAIDQAETAGAVSYVAHLAGAIAGLTIGLLVL
type: DOMAIN
name: Peptidase_S54_rhomboid_dom
description: Peptidase S54, rhomboid domain
Protein sequence:
MAEPTVVIAPTTVPREDLGHGEPLLMTAKQVKKTPGLEREGWWRLTITDTPIPGTYHFRTFTEEALLNPVKITYNFKNEGRKKLPLVLRNDPVPTDLPQYSPPDFLELLKKQTASYSFKDKPRADPSTLVDKDESLHLCPGQYEVLPAPVPKSPARSFVFRSSVQRFPPNYFTPHEGPGPGDYELKASPKGSITSCFRSKVPRFLPVSSKTPGPGAYTSSRQFPKQSSTIAKMGREHSLFFNNTIGF

Annotated regions:
phrase: TPGPGAYTSSRQFPKQSSTIAKMGREH
type: REPEAT
name: SHIPPO-rpt
description: Sperm-tail PG-rich repeat
Protein sequence:
MDRQPKVYSDPDNGFFFLDVPMPDDGQGGQQTATTAAGGAFGVGGGHSVPYVRIMNGVSGIQIGNHNAMSIASCWSPSYTDRRRRSYPKTATNAAADRVAAAVSAANAAVNAAAAAAAAGGGGGANLLAAAVTCANQRGCCGGNGGHSLPPTRMPKTNATAAAAPAVAGASNAKSDNNHANATSGAGSAAATPAATTPAATAVENRRPSPSPSTASTAPCDEGSSPRHHRPSHVSVGTQATPSTPIPIPAPRCSTGQQQQQPQAKKLKPAKADPLLYAATMPPPASVTTAAAAAVAPESESSPAASAPPAAAAMATGGDDEDQSSFSFVSDDVLGEFEDLRIAGLPVRDEMRPPTPTMTVIPVSRPFRAGRDSGRDALFDDAVESVRCYCHGILGNSRFCALVNEKCSEPAKERMARIRRYAADVTRCGPLALYTAIVSSANRLIQTDPSCDLDLAECYVETASKRNAVPLSAFYRDCDRLRDAVAAFFKTYGMVVDAMAQRITERVGPALGRGLYSTVVMMDRCGNSFQGREETPISVFARVAAALAVECEVDGGVSYKILSSKPVDAAQAFDAFLSALCSFAIIPSPRVLAYAGFGGSNPIFDAVSYRAQFYSAESTINGTLHDICDMVTNGLSVSVSAADLGGDIVASLHILGQQCKALRPYARFKTVLRIYFDIWSVDALKIFSFILDVGREYEGLMAFAVNTPRIFWDRYLDSSGDKMWLMFARREAAALCGLDLKSFRNVYEKMERDGRSAITVSPWWAVCQLDACVARGNTAVVFPHNVKSMIPENIGRPAVCGPGVSVVSGGFVGCTPIHELCINLENCVLEGAAVESSVDVVLGLGCRFSFKALESLVRDAVVLGNLLIDMTVRTNAYGAGKLLTLYRDLHIGVVGFHAVMNRLGQKFADMESYDLNQRIAEFIYYTAVRASVDLCMAGADPFPKFPKSLYAAGRFYPDLFDDDERGPRRMTKEFLEKLREDVVKHGIRNASFITGCSADEAANLAGTTPGFWPRRDNVFLEQTPLMMTPTKDQMLDECVRSVKIEPHRLHEEDLSCLGENRPVELPVLNSRLRQISKESATVAVRRGRSAPFYDDSDDEDEVACSETGWTVSTDAVIKMCVDRQPFVDHAQSLPVAIGFGGSSVELARHLRRGNALGLSVGVYKCSMPPSVNYR

Annotated regions:
phrase: VASLHILGQQCKALRPYARFKTVLRIYFDIWSVDALKIFSFILDVGREYEGLMAFAVNTPRIFWDRYLDSSGDKMWLMFARREAAALCGLDLKSFRNVYEKMERDGRSAITVSPWWAVCQLDACVARGNTAVVFPHNVKSMIPENIGRPAVCGPGVSVVSGGFVGCTPIHELCINLENCVLEGAAVESSVDVVLGLGCRFSFKALESLVRDAVVLGNLLIDMTVRTNAYGAGKLLTLYRDLHIGVVGFHAVMNRLGQKFADMESYDLNQRIAEFIYYTAVRASVDLCMAGADPFPKFPKSLYAAGRFYPDLFDDDERGPRRMTKEFLEKLREDVVKHGIRNASFITGCSADEAANLAGTTPGFWPRRDNVFLEQTPLMMTPTKDQMLDECVRSVKIEPHRLHEEDLSCLGENRPVELPVLNSRLRQISKESATVAVRRGRSAPFYDDSDDEDEVACSETGWTVSTDAVIKMCVDRQPFVDHAQSLP
type: DOMAIN
name: RNR_lg_C
description: Ribonucleotide reductase large subunit, C-terminal

phrase: GLYSTVVMMDRCGNSFQGREETPISVFARVAAALAVECEVDGGVSYKILSSKPVDAAQAFDAFLSALCSFAIIPSPRVLAYAG
type: DOMAIN
name: RNR_lsu_N
description: Ribonucleotide reductase large subunit, N-terminal

phrase: FSFKALESLVRDAVVLGNLLIDM
type: DOMAIN
name: RNR_lg_C
description: Ribonucleotide reductase large subunit, C-terminal

phrase: RDLHIGVVGFHAVMNRLGQKFA
type: DOMAIN
name: RNR_lg_C
description: Ribonucleotide reductase large subunit, C-terminal

phrase: LNQRIAEFIYYTAVRASVDLCMA
type: DOMAIN
name: RNR_lg_C
description: Ribonucleotide reductase large subunit, C-terminal

phrase: GIRNASFITGCSADEAANLAGTTPGFW
type: DOMAIN
name: RNR_lg_C
description: Ribonucleotide reductase large subunit, C-terminal

phrase: PYVRIMNGVSGIQIGNHNAMS
type: BINDING_SITE
name: RHIM
description: RIP homotypic interaction motif
Protein sequence:
MGSRLPPAALTLKQFLVRQQVLGLYRRIVRAVRQIPGAADRQYLQDWARDEFRRNKGASEEIAIRMMISHGQRQLQELERALQLAKS

Annotated regions:
phrase: LVRQQVLGLYRRIVRAVRQIPGAADRQYLQDWARDEFRRNKGASEEIAIRMMISHGQRQLQE
type: DOMAIN
name: Complex1_LYR_LYRM2
description: LYRM2, LYR domain

phrase: QQVLGLYRRIVRAVRQIPGAADRQYLQDWARDEFRRNKGASEEIAIRMMISHGQRQLQ
type: DOMAIN
name: Complex1_LYR_dom
description: Complex 1 LYR protein domain
Protein sequence:
MFVDEVEIKVKGGQGGNGVVSFRREKFEPMGGPDGGDGGDGGNVILRVDEGLNTLADFRYQRHYEAERGYHGSGKNKHGRSGEDLVLKVPPGTVVYDADTDELLADLTEDGEEYIVAHGGKGGRGNARFKKSTRKAPRFAEKGEPGEERSIRLELKLVADVGLIGFPNVGKSTLISVVSEARPKIANYHFTTLKPNLGVVALSEYKSFVMADIPGLIEGAHQGVGLGDEFLRHIERTRLLIHIIDISGIEGRDPLEDFKTINRELEKFNEKLSSRPQIVALNKIDLPGARENVERVQPVLEEKGYKVFPISAATKEGVKELIYYTGDLLKELPVERKIAKEDRIVIKPDFADEEENIVVEKKNGIYEVSGRLVEKYVIKTDFNNDAAVKRLLRVLQHHDLNELLRDKGVKNGDTVKIGPMEFEYME

Annotated regions:
phrase: DFADEEENIVVEKKNGIYEVSGRLVEKYVIKTDFNNDAAVKRLLRVLQHHDLNELLRDKGVKNGDTVKIGPMEFEYM
type: DOMAIN
name: OCT_dom
description: GTP-binding protein OBG, C-terminal

phrase: VDEVEIKVKGGQGGNGVVSFRREKFEPMGGPDGGDGGDGGNVILRVDEGLNTLADFRYQRHYEAERGYHGSGKNKHGRSGEDLVLKVPPGTVVYDADTDELLADLTEDGEEYIVAHGGKGGRGNARFKKSTRKAPRFAEKGEPGEERSIRLELK
type: DOMAIN
name: GTP1_OBG_dom
description: GTP1/OBG domain

phrase: ADVGLIGFPNVGKSTLISVVSEARPKIANYHFTTLKPNLGVVALSEYKSFVMADIPGLIEGAHQGVGLGDEFLRHIERTRLLIHIIDISGIEGRDPLEDFKTINRELEKFNEKLSSRPQIVALNKIDLPGARENVERVQPVLEEKGYKVFPISAATKEGVKELIYYTGDLL
type: DOMAIN
name: G_OBG
description: OBG-type guanine nucleotide-binding (G) domain

phrase: DVGLIGFPNVGKSTLISVVSEARPKIANYHFTTLKPNLGVVALSEYKSFVMADIPGLIEGAHQGVGLGDEFLRHIERTRLLIHIIDISGIEGRDPLEDFKTINRELEKFNEKLSSRPQIVALN
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: DIPGLIEGAHQGV
type: CONSERVED_SITE
name: GTP1-OBG_CS
description: GTP1/OBG, conserved site

phrase: EKKNGIYEVSGRLVEKYVIKTDFNNDAAVKRLLRVLQHHDLNELLRDKGVKNGDTVKIGPMEFE
type: DOMAIN
name: OCT_dom
description: GTP-binding protein OBG, C-terminal

phrase: MFVDEVEIKVKGGQGGNGVVSFRREKFEPMGGPDGGDGGDGGNVILRVDEGLNTLADFRYQRHYEAERGYHGSGKNKHGRSGEDLVLKVPPGTVVYDADTDELLADLTEDGEEYIVAHGGKGGRGNARFKKSTRKAPRFAEKGEPGEERSIRLELKL
type: DOMAIN
name: GTP1_OBG_dom
description: GTP1/OBG domain

phrase: VGLIGFPNVGKSTLISVVSE
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: RPKIANYHFTTLKPNLGV
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: MADIPGLIEGAHQGV
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: GDEFLRHIERTRLLIHII
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: VEKKNGIYEVSGRLVEKYVIKTDFNNDAAVKRLLRVLQHHDLNELLRDKGVKNGDTVKIGPMEFEY
type: DOMAIN
name: OCT_dom
description: GTP-binding protein OBG, C-terminal

phrase: ADVGLIGFPNVGKSTLISVVSEARPKIANYHFTTLKPNLGVVALSEYKSFVMADIPGLIEGAHQGVGLGDEFLRHIERTRLLIHIIDISGIEGRDPLEDFKTINRELEKFNEKLSSRPQIVALNKIDLPGARENVERVQPVLEEKGYKVFPISAATKEGVKELIYYTGDL
type: DOMAIN
name: G_OBG
description: OBG-type guanine nucleotide-binding (G) domain
Protein sequence:
MRLALGIEYDGAGFCGWQSQPNRLAVQDALESALSQLAGHQVRVSAAGRTDTGVHALSQVVHFDTEAVRSQTAWVRGVNTKLPRGVRVLWAKEVDPRFHARFDAYQRSYQYWLINQPVAPAVMAGKAGWFHQPLDLQAMQEAMAYLLGQHDFSAFRAAECQAKSPVKTMHHASVSAFGSSMIFDFCASAFLHHQVRNMVGALVYIGKGKYPPVFIAELLEKRDRRCSPPTFSPDGLYLTGVGYDGCWGLPGTERKLQIGIA

Annotated regions:
phrase: AMAYLLGQHDFSAFRAAECQAKSPVKTMHHASVSAFGSSMIFDFCASAFLHHQVRNMVGALVYIGKGKYPPVFIAELLEKRDRRCSPPTFSPDGLYLTGVGY
type: DOMAIN
name: PsdUridine_synth_TruA_a/b_dom
description: Pseudouridine synthase I, TruA, alpha/beta domain

phrase: EYDGAGFCGWQSQPNRLAVQDALESALSQLAGHQVRVSAAGRTDTGVHALSQVVHFDTEAVRSQTAWVRGVNTKLPRGVRVLWAKEVDPRFHARF
type: DOMAIN
name: PsdUridine_synth_TruA_a/b_dom
description: Pseudouridine synthase I, TruA, alpha/beta domain
Protein sequence:
MTTAIETYAPSEFEALVKSLGQPRFRAKQLFQWIYGKGATSYDEMSNLPAAMRAQLAEEAPLHIPEVVDKRVSKDGSRKYLLKLADGNLIETVGIPSRDDNASGDPRRLSVCFSTQVGCSMACAFCATGTEGFTRNLLPGEMAQQLLAVSRDFGMRITNAVAMGQGEPFLNYDNVIAALKILNHPDGLAIGARHITVSTCGIVKGIRAFGVEPEQYTLALSLHSANQSTRDELMPRCASTPLPKLKDALKDYYEHAGRRISLEYLLIEGKNDDSAHIHALIDYCKGLHVHVNLLPMNDVEGSPFKATSKSTLNQWMRELEDAHIRVSIRDSRGSDIDGACGQLKNRLG

Annotated regions:
phrase: ETYAPSEFEALVKSLGQPRFRAKQLFQWIYGKGATSYDEMSNLPAAMRAQLAEEAPLHIPEVVDKRVSKDGSRKYLLKLADGNLIETVGIPSRDDNASGDPRRLSVCFSTQVGCSMACAFCATGTEGFTRNLLPGEMAQQLLAVSRDFGMRITNAVAMGQGEPFLNYDNVIAALKILNHPDGLAIGARHITVSTCGIVKGIRAFGVEPEQYTLALSLHSANQSTRDELMPRCASTPLPKLKDALKDYYEHAGRRISLEYLLIEGKNDDSAHIHALIDYCKGLHVHVNLLPMNDVEGSPFKATSKSTLNQWMRELEDAHIRVSIRDSRGSDIDGACGQLK
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: DPRRLSVCFSTQVGCSMACAFCATGTEGFTRNLLPGEMAQQLLAVSRDFGMRITNAVAMGQGEPFLNYDNVIAALKILNHPDGLAIGARHITVSTCGIVKGIRAFGVEPEQYTLALSLHSANQSTRDELMPRCASTPLPKLKDALKDYYEHAGRRISLEYLLIEGKNDDSAHIHALIDYCKGLHVHVNLLPMNDVEGSPFKATSKSTLNQWMRELEDAHIRVSI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SEFEALVKSLGQPRFRAKQLFQWIYGKGATSYDEMSNLPAAMRAQLAEE
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: STQVGCSMACAFCATGTEGFTRNLLPGEMAQQLLAVSRDFGMRITNAVAMGQGEPFLNYDNVIAALKILNHPDGLAIGARHITVSTCGIVKGIRAFGVEPEQYTLALSLHSANQSTRDELMPRCASTPLPKLKDALKDYYEHAGRRISLEYLLIEGKNDD
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MRVMETRKNYQRLWKWGMMLLGMLLICSATEKLWVTVYYGVPVWKEATTTLFCASDAKAYETEVHNVWATHACVPTDPDPREVSLGNVTEPFNMWKNDMVEQMQEDIISLWDQSLKPCVKLTPLCVTLNCTDVNVNRTTVNGTTDSNTNSPIELKGEIKNCSFNITTSMRDKMKKDYALFNRLDVVPIENDNTSYRLISCNTSVITQACPKVTFDPIPIHYCTPAGFAILKCNDKKFNGTGECRNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSANFSDNAKVIIVQLAKAVQINCTRPNNNTRKSIPLGPGRAFYTTGAIIGDIRQAYCTIGNSTWKKTLKKIVEKLREKFSNNTIIFNHSAGGDPEIVMHSFNCRGEFFYCNTSKLFNSTWNSTEGLNDTEEGNGTIVLPCRIKQIINMWQEVGKAMYAPPISGQINCVSNITGMILTRDGGQDNRSSETFRPGGGDMRDNWRSELYKYKVVQIEPLGVAPTKAKRRVVQREKRAIGVLGAMFIGFLGAAGSTMGAASMTLTVQARLLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNTSWSNKSLDSIWDNMTWMQWEREIDNYTGLIYSLIEKSQNQQEKNEQELLELDKWASLWTWFDITNWLWYIKIFIMIVGGLIGLRIVFTVLSIVNRVRQGYSPLSFQTRLPARRGPDRPEGTEEEGGERDRDRSGPLVDGFLAIIWVDLRSLCLFSY

Annotated regions:
phrase: LWVTVYYGVPVWKEATTTLFCASDAKAYETEVHNVWATHACVPTDPDPREVSLGNVTEPFNMWKNDMVEQMQEDIISLWDQSLKPCVKLTPLCVTLNCTDVNVNRTTVNGTTDSNTNSPIELKGEIKNCSFNITTSMRDKMKKDYALFNRLDVVPIENDNTSYRLISCNTSVITQACPKVTFDPIPIHYCTPAGFAILKCNDKKFNGTGECRNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSANFSDNAKVIIVQLAKAVQINCTRPNNNTRKSIPLGPGRAFYTTGAIIGDIRQAYCTIGNSTWKKTLKKIVEKLREKFSNNTIIFNHSAGGDPEIVMHSFNCRGEFFYCNTSKLFNSTWNSTEGLNDTEEGNGTIVLPCRIKQIINMWQEVGKAMYAPPISGQINCVSNITGMILTRDGGQDNRSSETFRPGGGDMRDNWRSELYKYKVVQIEPLGVAPTKAKRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: MGAASMTLTVQARLLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNTSWSNKSLDSIWDNMTWMQWEREIDNYTGLIYSLIEKSQNQQEKNEQELLELDKWASLWTWFDITNWLWYIKIFIMIVGGLIGLRIVFTVLSIVNRVRQGYSPLSFQ
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: VQARLLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNTSWSNKSLDSIWDNMTWMQWEREIDNYTGLIYSLIEKSQNQQEKNEQELLELD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MTNSNLRTENHFDYVKITLASPDRVMEWGQRTLPNGQVVGEVTKPETINYRTLKPEMDGLFCEKIFGPSKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGFIKLAAPVSHVWYLKGIPSYVAILLDMPLRDVEQIVYFNCYVVLDAGDHKDLKYKQLLTEDEWLEIEDEIYAEDSEIENEPVVGIGAEALKQLLEDLQLNAVAEQLREEIAGSKGQKRAKLIKRLRVIDNFIATNARPEWMVLDAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRSVIVVGPKLKMHQCGLPKEMAIELFQPFVIHRLIRQNIVNNIKAAKKLIQRADDEVMQVLQEVIDGHPIMLNRAPTLHRLGIQAFEPKLVDGRAIQLHPLVCPAFNADFDGDQMAVHVPLAIEAQTEARMLMLASNNILSPATGDPIITPSQDMVLGSYYLTALQPQMHPIEFGDRSRTYSSLEDVIHAFEDNRITLHDWVWVRFNGEVEDEDEREEPITTETLSDGTRFEQWTYRRDRFDEDGALISRYILTTVGRVVMNHTIIDAVAAT

Annotated regions:
phrase: GKRVDYSGRSVIVVGPKLKMHQCGLPKEMAIELFQPFVIHRLIRQNIVNNIKAAKKLIQRADDEVMQVLQEVIDGHPIMLNRAPTLHRLGIQAFEPKLVDGRAIQLHPLVCPAFNADFDGDQMAVHVPLAIEAQTEARMLM
type: DOMAIN
name: RNA_pol_asu
description: RNA polymerase, alpha subunit

phrase: HFDYVKITLASPDRVMEWGQRTLPNGQVVGEVTKPETINYRTLKPEMDGLFCEKIFGPSKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGFIKLAAPVSHVWYLKGIPSYVAILLDMPLRDVEQIVYFNCYVVLDAGDHKDLKYKQLLTEDEWLEIEDEIYAEDSEIENEPVVGIGAEALKQLLEDLQLNAVAEQLREEIAGSKGQKRAKLIKRLRVIDNFIATNARPEWMVLDAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQN
type: DOMAIN
name: RNA_pol_Rpb1_1
description: RNA polymerase Rpb1, domain 1

phrase: EWMVLDAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRSVIVVGPKLKMHQCGLPKEMAIELFQPFVIHRLIRQNIVNNIKAAKKLIQRADDEVMQVLQEVIDGHPIMLNRAPTLHRLGIQAFEPKLVDGRAIQLHPLVCPAFNADFDGDQMAVHVPLAIEAQTEARMLMLASNNILSPATGDPIITPSQDMVLGSYYL
type: DOMAIN
name: RNA_pol_N
description: RNA polymerase, N-terminal

phrase: NILSPATGDPIITPSQDMVLGSYYLTALQPQMHPIEFGDRSRTYSSLEDVIHAFEDNRITLHDWVWVR
type: DOMAIN
name: RNA_pol_Rpb1_3
description: RNA polymerase Rpb1, domain 3
Protein sequence:
MTDPQRPEPPQKPDTNPQPAIPNQYSFLWLSAAIFLMVLWMQGANQPQQQEVAYSDFKEAVTAGQVSEVTLRQEDIQGNFTESGAARFSAASEPSSTRFITLRPQTDDPALLPLLEEHGVTIQGARSGRPWWQELILGFLPWILFLALMFWFWGNAQKRIGQGGGVLDFSRSKARRARKETSTVTLDDVAGVESAKREIAEIIDFLKTPEKYQRLGAIMPKGILLVGPPGTGKTLLARAIAGEAEVPFFSISASEFIEMFVGVGAARVRDMFKEARKDAPALIFIDELDAVGRSRGAGLGGGHDEREQTLNQILTEMDGFEAHENVLVLAATNRPDVLDTALLRPGRFDRKITLERPHKEARAAILKVHARKVPLSDDVDLDQIATRTIGFSGADLHNLVNEAALTAAREGLDEVNTRCFEIARDRIILGETREAQLPPQEREAVAYHECGHALMAYYMPNADPLTKVTIIPHGMAMGVTEQTPRDDHYTYTESYLKDRIKVMLGGRCAEKLVYGEVSTGAQNDLKEATTLVRRMIGQWGMSEKIGPMGLNIGEEHVFLGREMGQPREFSEKMAELIDAEIQSQLLSLEKATLDFLASHREQLEALAKTVLKQETLSAEEIRDILEQMPKAPEPSKPIKSDLPDHG

Annotated regions:
phrase: DVDLDQIATRTIGFSGADLHNLVNEAALTAAREGLDEVNTRCF
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: ILLVGPPGTGKTLLARAIAGEAEVPFFSISASEFIEMFVGVGAARVRDMFKEARKDAPALIFIDELDAVGRSRGAGLGGGHDEREQTLNQILTEMDGFEAHENVLVLAATNRPDVLDTALLRPGRFDRKITL
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: PPQEREAVAYHECGHALMAYYMPNADPLTKVTIIPHGMAMGVTEQTPRDDHYTYTESYLKDRIKVMLGGRCAEKLVYGEVSTGAQNDLKEATTLVRRMIGQWGMSEKIGPMGLNIGEEHVFLGREMGQPREFSEKMAELIDAEIQSQLLSLEKATLDFLASHREQLEALAKTVLKQETLSAEEIRD
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: VLVLAATNRPDVLDTALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: MPKGILLVGPPGTGKTLLARAIAGEAEVPFFSISASEFIEMFVGVGAARVRDMFKEARKDAPALIFIDELDAVGRSRGAGLGGGHDEREQTLNQILTEMDGFEAHENVLVLAATNRPDVLDTALLRPGRFDRKITLERP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: FLWLSAAIFLMVLWMQGANQPQQQEVAYSDFKEAVTAGQVSEVTLRQEDIQGNFTESGAARFSAASEPSSTRFITLRPQTDDPALLPLLEEHGVTIQ
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular
Protein sequence:
MSVYTTAQLLAVNEKKFKFDPLFLRIFFRETYPFSTEKVYLSQIPGLVNMALYVSPIVSGKVIRSRGGSTSEFTPGYVKPKHEVNPLMMTLRLPDEDPQNVADPVYRRRRIILQNMKDEELAIAQVEEKQAVSAVLSGKYTMTGEAFEPVEVDMGRSAGNNIVQAGAAAWSTRDKETYDPTDDIEAYALNARGVVNIIVFDPKGWALFRSFKAVEKKLDTRRGSNSELETAVKDLGMAVSYKGMFGDVAIVVYSGQYVENDVKKNYLPDLTMVLGNTQARGLRTYGCILDADAQREGIDASTRYPKNWVQLGDPVREFTMIQSAPLMLLPDPDAFVSVKLA

Annotated regions:
Protein sequence:
MLCVAMAARPVSSTTSTCRPCLPAQVSASKPSTSSSPGTGVLVGVPRERGSSVSKAAIRGARLEAAARCSLVRQRPMLLATVAVGSLVAAGAANATEIGDSLLGSSGLALADLSVGDWFGNLLYSAGQQANEAVQDQLSALSFTSLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKDRSEVVGNSVAFSLGLATTLAILGVAASFAGKAYGQVGQGLPVAASGLAVIMGLNLLEVIELQLPSFFSDYDPRAAAANLPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPIVGGSLLLTYTTGYVAPLLIAASFAGALQSLLSFRRYSAWINPISGAFLLGGGVYTLLDRLFPATSMVM

Annotated regions:
phrase: SLAVIFGAGLVTSLSPCTLSVLPLTLGYIGAFGSGKDRSEVVGNSVAFSLGLATTLAILGVAASFAGKAYGQVGQGLPVAASGLAVIMGLNLLEVIELQLPSFFSDYDPRAAAANLPSSVQAYLAGLTFALAASPCSTPVLATLLGYVATSRDPIVGGSLLLTYTTGYVAPLLIAASFAGA
type: DOMAIN
name: Cyt_c_assmbl_TM_dom
description: Cytochrome C biogenesis protein, transmembrane domain