nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MEETGVKDVRDLCEKFLDFKREKERLEELLKEYFKRLEELERKLRAHEEKLRIEARRRKTLEKELEMERDEKAELREELRRKEVMIEKLRSDLQRMKKPPLIVGTVEEILDDGRVIVKSSTGPKFVSNVSPTVDRNELEPGANVALNQQSMAVVDVLPSEKDSRVLAMEVDESPDVSYDDIGGLDEQIREIREVVEKPLKEPELFEKVGVEPPKGVLLYGPPGTGKTLLAKAVANHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARRMRDATSGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITEGASGADIKAICTEAGMMAIREDRDIVTMDDFLKAVDRVMGKKEEESGEFKRAYH

Annotated regions:
phrase: VGTVEEILDDGRVIVKSSTGPKFVSNVSPTVDRNELEPGANVALNQQSMAVVDVL
type: DOMAIN
name: Prot_ATP_ID_OB_2nd
description: Proteasomal ATPase, second OB domain

phrase: PPKGVLLYGPPGTGKTLLAKAVANHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARRMRDATSGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIPLP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VLLYGPPGTGKTLLAKAVANHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARRMRDATSGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKDILDPALLRPGRFDRHIKIP
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: DVDLQKLAKITEGASGADIKAICTEAGMMAIREDRDIVTMDDF
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: IKVIAATNRKDILDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site
Protein sequence:
MLDFLAENNLCGQAILRIVSCGNAIIAELLRLSEFIPAVFRLKDRADQQKYGDIIFDFSYFKGPELWESKLDAKPELQDLDEEFRENNIEIVTRFYLAFQSVHKYIVDLNRYLDDLNEGVYIQQTLETVLLNEDGKQLLCEALYLYGVMLLVIDQKIEGEVRERMLVSYYRYSAARSSADSNMDDICKLLRSTGYSSQPGARRPPNYPESYFQRVPINESFISMVIGRLRSDDIYNQVSAYPLPEHRSTALANQAAMLYVILYFEPSILHTHQAKMREIVDKYFPDNWVISIYMGITVNLVDAWEPYKAAKTALNNTLDLSNVREQASRYATVSERVHAQVQQFLKEGYLREEMVLDNIPKLLNCLRDCNVAIRWLMLHTADSACDPNNKRLRQIKDQILTDSRYNPRILFQLLLDTAQFEFILKEMFKQMLSEKQTKWEHYKKEGSERMTELADVFSGVKPLTRVEKNENLQAWFREISKQILSLNYDDSTAAGRKTVQLIQALEEVQEFHQLESNLQVCQFLADTRKFLHQMIRTINIKEEVLITMQIVGDLSFAWQLIDSFTSIMQESIRVNPSMVTKLRATFLKLASALDLPLLRINQANSPDLLSVSQYYSGELVSYVRKVLQIIPESMFTSLLKIIKLQTHDIIEVPTRLDKDKLRDYAQLGPRYEVAKLTHAISIFTEGILMMKTTLVGIIKVDPKQLLEDGIRKELVKRVAFALHRGLIFNPRAKPSELMPKLKELGATMDGFHRSFEYIQDYVNIYGLKIWQEEVSRIINYNVEQECNNFLRTKIQDWQSMYQSTHIPIPKFTPVDESVTFIGRLCREILRITDPKMTCHIDQLNTWYDMKTHQEVTSSRLFSEIQTTLGTFGLNGLDRLLCFMIVKELQNFLSMFQKIILRDRTVQDTLKTLMNAVSPLKSIVANSNKIYFSAIAKTQKIWTAYLEAIMKVGQMQILRQQIANELNYSCRFDSKHLAAALENLNKALLADIEAHYQDPSLPYPKEDNTLLYEITAYLEAAGIHNPLNKIYITTKRLPYFPIVNFLFLIAQLPKLQYNKNLGMVCRKPTDPVDWPPLVLGLLTLLKQFHSRYTEQFLALIGQFICSTVEQCTSQKIPEIPADVVGALLFLEDYARYTKLPRRVAEAHVPNFIFDEFRTVL

Annotated regions:
Protein sequence:
TALFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFLFICIYLHIGRGLYYGSYLYKETWNIGVILLLLTMM

Annotated regions:
phrase: TALFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFLFICIYLHIGRGLYYGSYLYKETWNIGVILLLLTM
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: TALFLAMHYTSDIATAFSSVAHICRDVNYGWLIRNMHANGASFLFICIYLHIGRGLYYGSYLYKETWNIGVILLLLTM
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain
Protein sequence:
MFEGTTIVAVKRGGEVAIGGDGQVTFGQQTVIKRRANKIRKLYRGKVLAGFAGAVADAFTLFDLFEKKLEESQGNLTRAAVELVKTWRTDKFLRRLEAMLLVADRERILLISGTGEVIEPDDGVLAIGSGGNYALAAARALINHTNLSAREIVMESLKIAQEICVYTNDFITVETIGGE

Annotated regions:
Protein sequence:
MAIEKSVASASIAEVIDRILDKGVVIDAFVRVSLVGIELIAIEVRAVVASIETWLKYAEAVGLTVDPATT

Annotated regions:
phrase: RAVVASIETWLKY
type: CONSERVED_SITE
name: GvpA-like_CS
description: Gas vesicle protein A-like, conserved site

phrase: IAEVIDRILDKGVV
type: CONSERVED_SITE
name: GvpA-like_CS
description: Gas vesicle protein A-like, conserved site
Protein sequence:
MQNKELIQHAAYAAIERILNEYFREENLYQVPPQNHQWSIQLSELETLTGEFRYWSAMGHHMYHPEVWLIDGKSKKITTYKEAIARILQHMAQSADNQTAVQQHMAQIMSDIDNSIHRTARYLQSNTIDYVEDRYIVSEQSLYLGHPFHPTPKSASGFSEADLEKYAPECHTSFQLHYLAVHQDVLLTRYVEGKEDQVEKVLYQLADIDISEIPKDFILLPTHPYQINVLRQHPQYMQYSEQGLIKDLGVSGDSVYPTSSVRTVFSKALNIYLKLPIHVKITNFIRTNDLEQIERTIDAAQVIASVKDEVETPHFKLMFEEGYRALLPNPLGQTVEPEMDLLTNSAMIVREGIPNYHADKDIHVLASLFETMPDSPMSKLSQVIEQSGLAPEAWLECYLNRTLLPILKLFSNTGISLEAHVQNTLIELKDGIPDVCFVRDLEGICLSRTIATEKQLVPNVVAASSPVVYAHDEAWHRLKYYVVVNHLGHLVSTIGKATRNEVVLWQLVAHRLMTWKKEYANNAVFVDCVEDLYQTPTIAAKANLMSKLNDCGANPIYTHIPNPICHNKEVSYCESNNS

Annotated regions:
phrase: EAWLECYLNRTLLPILKLFSNTGISLEAHVQNTLIELKDGIPDVCFVRDLEGICLSRTIATEKQLVPNVVAASSPVVYAHDEAWHRLKYYVVVNHLGHLVSTIGKATRNEVVLWQLVAHRLMTWKKEYANNAVFVDCVEDLYQTPTIAAKANLMSKLNDC
type: DOMAIN
name: IucA/IucC-like_C
description: Aerobactin siderophore biosynthesis IucA/IucC-like, C-terminal

phrase: YIVSEQSLYLGHPFHPTPKSASGFSEADLEKYAPECHTSFQLHYLAVHQDVLLTRYVEGKEDQVEKVLYQLADIDISEIPKDFILLPTHPYQINVLRQHPQYMQYSEQGLIKDLGVSGDSVYPTSSVRTVFSKALNIYLKLPIHVKITNFIRTNDLEQIERTIDAAQVIASVKDEVETPHFKLMFEEGYRALLPNPLGQTVEPEMDLLTNSAMIVREGIPNYHADKDIHVLASL
type: DOMAIN
name: Aerobactin_biosyn_IucA/IucC_N
description: Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal
Protein sequence:
MDRTTLPYGLFGLDIDPYKEFGATVELLSFLPSDFFPSVRDLLDTASALYRESLESSDHCSPHHTALRQAILCWGELMTLATWVGNNLEDPASRDLVVNYVNTNMGLKIRQLLWFHISCLTFGRETVLEYLVSFGVWIRTPPAYRPPNAPILSTLPETTVVRRRGRSPRRRTPSPRRRRSQSPRRRRSASPASQC

Annotated regions:
Protein sequence:
MAAQTDFWDAIVIGAGIQGCFTAYHLAKHSKSVLLLEQFFLPHSRGSSHGQSRIIRKAYPEDFYTMMMKECYQTWAQLEREAGTQLHRQTELLLLGTKENPGLKTIQATLSRQGIDHEYLSSVDLKQRFPNIRFTRGEVGLLDKTGGVLYADKALRALQHIICQLGGTVCDGEKVVEIRPGLPVTVKTTLKSYQANSLVITAGPWTNRLLHPLGIELPLQTLRINVCYWREKVPGSYGVSQAFPCILGLDLAPHHIYGLPASEYPGLMKICYHHGDNVDPEERDCPKTFSDIQDVQILCHFVRDHLPGLRAEPDIMERCMYTNTPDEHFILDCHPKYDNIVIGAGFSGHGFKLAPVVGKILYELSMKLPPSYDLAPFRMSRFSTLSKAHL

Annotated regions:
phrase: DAIVIGAGIQGCFTAYHLAKHSKSVLLLEQFFLPHSRGSSHGQSRIIRKAYPEDFYTMMMKECYQTWAQLEREAGTQLHRQTELLLLGTKENPGLKTIQATLSRQGIDHEYLSSVDLKQRFPNIRFTRGEVGLLDKTGGVLYADKALRALQHIICQLGGTVCDGEKVVEIRPGLPVTVKTTLKSYQANSLVITAGPWTNRLLHPLGIELPLQTLRINVCYWREKVPGSYGVSQAFPCILGLDLAPHHIYGLPASEYPGLMKICYHHGDNVDPEERDCPKTFSDIQDVQILCHFVRDHLPGLRAEPDIMERCMYTNTPDEHFILDCHPKYDNIVIGAGFSGHGFKLAPVVGKILYE
type: DOMAIN
name: FAD-dep_OxRdtase
description: FAD dependent oxidoreductase
Protein sequence:
MARVKRGVVARRSHKKVLKAAKGYYGARSRVFRVAKQAVIKAGQYAYRDRRNKKRNFRALWITRINAQSRAEGMSYSRLIAGLKKAEITLDRRVLADLAIHDKPAFAAIVAKAKDALAA

Annotated regions:
phrase: KRNFRALWITRINAQS
type: CONSERVED_SITE
name: RIBOSOMAL_L20_CS
description: Large ribosomal subunit protein bL20, conserved site
Protein sequence:
MAAKLRKGDKVVVLAGRDKGKEGTIASVDPKAGKAVVDGVNMAIRHTRQTQTSQGGRLPKALPIDLSNLALLDSNGKATRVGFREEDGKKVRFAKTTGETV

Annotated regions:
phrase: KGDKVVVLAGRDKGKEGTIASVDPKAGKAVV
type: DOMAIN
name: KOW
description: KOW

phrase: KLRKGDKVVVLAGRDKGKEGTIASVDP
type: DOMAIN
name: KOW
description: KOW

phrase: GDKVVVLAGRDKGKEGTIASVDPKAGKAVVDGVNMAIRHTRQTQTSQGGRLPKALPIDLSNLA
type: DOMAIN
name: Ribosomal_uL24_KOW
description: Large ribosomal subunit protein uL24, KOW domain

phrase: GDKVVVLAGRDKGKEGT
type: CONSERVED_SITE
name: Ribosomal_uL24_CS
description: Large ribosomal subunit protein uL24, conserved site
Protein sequence:
MSVSNRNGNGSEVIYVGDRSTNRPPRNAPSPDEDRKEVKILFFDLTYYNTTTKFLLCCAGVFVLYLLYGYMQELIFTLDGFKPYGWFLTLVQFAYYTVFGYVERSLESKRVPRCIPMKTYVLLAFLTLGTMGLSNSSLGYLNYPTQVIFKCCKLVPVLIGSILIQGKKHGPLDFLAAIAMCLGLTLFTLADSQVSPNFNPFGVLLISLALLCDAAIGNVQEKAMREHKAPNNEVVIYSYGIGFVYLSVIMLLTGNLFSGITFCMKYPVETFGYAFLFSLSGYLGIQIVLTLVRTCGAPLAATVTTARKAVTIALSFVFFSKPFTINYLWSGLIVVLGIYLNVYSKRSKLTFADLNRTAERIYRKLVPQRGGSSSTKKLLLEV

Annotated regions:
Protein sequence:
MVPAAGRRPPRVMRLLGWWQVLLWVLGLPVRGVEVAEESGRLWSEEQPAHPLQVGAVYLGEEELLHDPMGQDRAAEEANAVLGLDTQGDHMVMLSVIPGEAEDKVSSEPSGVTCGAGGAEDSRCNVRESLFSLDGAGAHFPDREEEYYTEPEVAESDAAPTEDSNNTESLKSPKVNCEERNITGLENFTLKILNMSQDLMDFLNPNGSDCTLVLFYTPWCRFSASLAPHFNSLPRAFPALHFLALDASQHSSLSTRFGTVAVPNILLFQGAKPMARFNHTDRTLETLKIFIFNQTGIEAKKNVVVTQADQIGPLPSTLIKSVDWLLVFSLFFLISFIMYATIRTESIRWLIPGQEQEHVE

Annotated regions:
phrase: SDCTLVLFYTPWCRFSASLAPHFNSLPRAFPALHFLALDASQHSSLSTRFGTVAVPNILLFQGAKPMARFNHTDRTLETLK
type: DOMAIN
name: Thioredoxin_domain
description: Thioredoxin domain

phrase: VAESDAAPTEDSNNTESLKSPKVNCEERNITGLENFTLKILNMSQDLMDFLNPNGSDCTLVLFYTPWCRFSASLAPHFNSLPRAFPALHFLALDASQHSSLSTRFGTVAVPNILLFQGAKPMARFNHTDRTLETLKIFIFNQT
type: DOMAIN
name: Thioredoxin_domain
description: Thioredoxin domain
Protein sequence:
MTKYIFVTGGVVSSVGKGIAVASIGRILKSRGVTVSVIKLDPYLNVDPGTMSPYQHGEVFVTTDGSETDLDLGHYERFIDVNLTRSSNVTAGQIYKDVIARERRGEFLGGTIQIVPHVTDAIKQRMFDLAEESRAEVIIVEVGGTVGDIEGQPFLEAIRQMRNDAGRNNVFYIHVTYLPHIPTTGELKTKPTQHSVRELRSDGIQPDAIICRSEEPVTDDIKDKIALFCDVERKSVIGAETAFSVYQVPMLLQDEGLGDIVIEALGLSATEPDMADWRSLVDSILEPKHKISIALVGKYVDLPDSYLSVKEALFHAGLAHGSNIEIDWVAAEEVERVGPERLLQSVSGIVVPGGFGERGVEGMIETVRYAREERVPYFGLCLGMQVMVIEAARNLLGKQDANSTEFDANTQHPVIDLMPDQRSVTDMGGTMRLGVYPCSLVPDSIARRAYGVSVVDERHRHRFEVSNAYRESFEAVGFWPTGLSPDNRLVEIMEIEDHPFMLGVQFHPEFLSRPNRPHPLFREFIDVARGTLREGGQHILPIERPDHSISSKTL

Annotated regions:
phrase: KYIFVTGGVVSSVGKGIAVASIGRILKSRGVTVSVIKLDPYLNVDPGTMSPYQHGEVFVTTDGSETDLDLGHYERFIDVNLTRSSNVTAGQIYKDVIARERRGEFLGGTIQIVPHVTDAIKQRMFDLAEESRAEVIIVEVGGTVGDIEGQPFLEAIRQMRNDAGRNNVFYIHVTYLPHIPTTGELKTKPTQHSVRELRSDGIQPDAIICRSEEPVTDDIKDKIALFCDVERKSVIGAETAFSVYQVPMLLQDEGLGDIVIEALG
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: KYIFVTGGVVSSVGKGIAVASIGRILKSRGVTVSVIKLDPYLNVDPGTMSPYQHGEVFVTTDGSETDLDLGHYERFIDVNLTRSSNVTAGQIYKDVIARERRGEFLGGTIQIVPHVTDAIKQRMFDLAEESRAEVIIVEVGGTVGDIEGQPFLEAIRQMRNDAGRNNVFYIHVTYLPHIPTTGELKTKPTQHSVRELRSDGIQPDAIICRSEEPVTDDIKDKIALFCDVERKSVIGAETAFSVYQVPMLLQDEGLGDIVI
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: ISIALVGKYVDLPDSYLSVKEALFHAGLAHGSNIEIDWVAAEEVERVGPERLLQSVSGIVVPGGFGERGVEGMIETVRYAREERVPYFGLCLGMQVMVIEAARNLLGKQDANSTEFDANTQHPVIDLMPDQRSVTDMGGTMRLGVYPCSLVPDSIARRAYGVSVVDERHRHRFEVSNAYRESFEAVGFWPTGLSPDNRLVEIMEIEDHPFMLGVQFHPEFLSRPNRPHPLFREF
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain

phrase: LPDSYLSVKEALFHAGLAHGSNIEIDWVAAEEVERVGPERLLQSVSGIVVPGGFGERGVEGMIETVRYAREERVPYFGLCLGMQVMVIEAARNLLGKQDANSTEFDANTQHPVIDLMPDQRSVTDMGGTMRLGVYPCSLVPDSIARRAYGVSVVDERHRHRFEVSNAYRESFEAVGFWPTGLSPDNRLVEIMEIEDHPFMLGVQFHPEFLSRPNRPHPLFREFI
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase
Protein sequence:
MNPGEPADPAPVPLPEPKRLGTLARLAPEPMKVVLNWGRRYSLWVFNFGLACCAIEFIAASMARHDFIRLGVIPFAPGPRQADLMVVSGTVTDKMAPAVKRLYEQMPEPKYVISFGACSNCGGPYWDSYSVTKGVDQIIPVDVYVPGCPPRPEALLQGILKLQEKIARESLGERYGVSPRPSTAALQSGLVRPPEPEPEPEPEPEPEPGQGPGQGPGSGEGTDTGSDAGRGR

Annotated regions:
phrase: CCAIEFIAASMARHDFIRLGVIPFAPGPRQADLMVVSGTVTDKMAPAVKRLYEQMPEPKYVISFGACSNCGGPYWDSYSVTKGVDQIIPVDVYVPGCPPRPEALLQGILK
type: DOMAIN
name: NADH_UbQ_OxRdtase-like_20kDa
description: NADH:ubiquinone oxidoreductase-like, 20kDa subunit
Protein sequence:
MQNMVILGATGSIGASTLSVMVNNPADFHVYGLVANASVQKMLALCITHQPEYAHMVDENAAMELKSLLPNHCVTQVTTGAEALNALVTDSRTDTVMAAIVGAAGLVPTFDAVKAGKRVLLANKEALVMSGELFMHTARASGATVLPVDSEHNAIFQCLPTNVQAQLGYCDLSANGISHILLTGSGGPFLNTDLATLSAMTPAQACNHPNWSMGPKISVDSATMMNKGLEFIEARWLFNTQAEQLKVVIHPQSVIHSMVQYRDGSVIAQMGNPDMRTPIAHCMSYPQRIGAGVEPLDFFKVGQLSFCEPDFDRFPCLRLAMQACEQGQEATTVLNAANEIAVDSFLKGRIRFTDIANVNYRCLDSVQQTRLDSIEDILQLDEQARATAVSVISTLN

Annotated regions:
phrase: VLPVDSEHNAIFQCLPTNVQAQLGYCDLSANGISHILLTGSGGPFLNTDLATLSAMTPAQACNHPNWSMGPKISVDSATMMNKGLEFIEARWL
type: DOMAIN
name: DXP_reductoisomerase_C
description: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal

phrase: MVILGATGSIGASTLSVMVNNPADFHVYGLVANASVQKMLALCITHQPEYAHMVDENAAMELKSLLPNHCVTQVTTGAEALNALVTDSRTDTVMAAIVGAAGLVPTFDAVKAGKRVLLANKEALVMS
type: DOMAIN
name: DXP_reductoisomerase_N
description: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal

phrase: MGNPDMRTPIAHCMSYPQRIGAGVEPLDFFKVGQLSFCEPDFDRFPCLRLAMQACEQGQEATTVLNAANEIAVDSFLKGRIRFTDIANVNYRCLDSVQQTRLDSIEDILQLDEQAR
type: DOMAIN
name: DXPR_C
description: DXP reductoisomerase, C-terminal domain
Protein sequence:
MPYANQPTVRITELTDENVKFIIENTDLAVANSIRRVFIAEVPIIAIDWVQIDANSSVLHDEFIAHRLGLIPLTSDDIVDKLQYSRDCTCEEFCPECSVEFTLDVRCNEDQTRHVTSRDLISNSPRVIPVTSRNRDNDPNDYVEQDDILIVKLRKGQELRLRAYAKKGFGKEHAKWNPTAGVAFEYDPDNALRHTVYPKPEEWPKSEYSELDEDESQAPYDPNGKPERFYYNVESCGSLRPETIVLSALSGLKKKLSDLQTQLSHEIQSDVLTIN

Annotated regions:
phrase: VQIDANSSVLHDEFIAHRLGLIPLTSDDIVDKLQYSRDCTCEEFCPECSVEFTLDVRCNEDQTRHVTSRDLISNSPRVIPVTSRNRDNDPNDYVEQDDILIVKLRKGQELRLRAYAKKGFGKEHA
type: DOMAIN
name: DNA-dir_RNA_pol_insert
description: DNA-directed RNA polymerase, insert domain

phrase: KFIIENTDLAVANSIRRVFIAEVPIIAIDWVQIDANSSVLHDEFIAHRLGLIPLTSDDIVDKLQYSRDCTCEEFCPECSVEFTLDVRCNEDQTRHVTSRDLISNSPRVIPVTSRNRDNDPNDYVEQDDILIVKLRKGQELRLRAYAKKGFGKEHAKWNPTAGVAFEYDPDNALRHTVYPKPEEWPKSEYSELDEDESQAPYDPNGKPERFYYNVESCGSLRPETIVLSALSGLKKK
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: NVKFIIENTDLAVANSIRRVFIAEVPIIAIDWVQIDANSSVLHDEFIAHRLGLIPLTSDDIVDKLQYSRDCTCEEFCPECSVEFTLDVRCNEDQTRHVTSRDLISNSPRVIPVTSRNRDNDPNDYVEQDDILIVKLRKGQELRLRAYAKKGFGKEHAKWNPTAGVAFEYDPDNALRHTVYPKPEEWPKSEYSELDEDESQAPYDPNGKPERFYYNVESCGSLRPETIVLSALSGLKKKLSDLQT
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: NSIRRVFIAEVPIIAIDWVQIDANSSVLHDEFIAHRLGLI
type: CONSERVED_SITE
name: DNA-dir_RNA_pol_30-40kDasu_CS
description: DNA-directed RNA polymerase, 30-40kDa subunit, conserved site
Protein sequence:
MSSAIERKSLDPTDEPVDEVLQIPPSLLTCGGCQQSIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLFGQDGLCASCDKRIRAFEMTMRVKDKVYHLECFKCAACQKHFCVGDRYLLINSDIVCEQDIYEWTKLNEMM

Annotated regions:
phrase: GLCASCDKRIRAFEMTMRVKDKVYHLECFKCAACQKHFCVGDRYLLINSDIVCEQDIYEWTK
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: LTCGGCQQSIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLFG
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: CASCDKRIRAFEMTMRVKDKVYHLECFKCAACQKH
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: TCGGCQQSIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRR
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: LCASCDKRIRAFEMTMRVKDKVYHLECFKCAACQKHFCVGDRYLLINSDIVCEQ
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: CASCDKRIRAFEMTMRVKDKVYHLECFKCAACQKHFCVGDRYLLINSDIVCEQDIYE
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: CGGCQQSIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRL
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type
Protein sequence:
MSPQTETKASVGFKAGVKDYKLTYYTPEYVPLDTDILAAFRVTPQPGVPSEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIDPVPGEENQYICYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPVAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKAQAETGEIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRLSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDYTEIDADRGIYFTQSWVSTPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGATIIREAAKWSPELAAACEVWKEIKFEFPAVDVLDKAKK

Annotated regions:
phrase: GLDFTKDD
type: ACTIVE_SITE
name: RuBisCo_large_chain_AS
description: Ribulose bisphosphate carboxylase, large chain, active site

phrase: YYTPEYVPLDTDILAAFRVTPQPGVPSEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIDPVPGEENQYICYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPVA
type: DOMAIN
name: RuBisCO_lsu_fd_N
description: Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal

phrase: GIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKAQAETGEIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRLSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDYTEIDADRGIYFTQSWVSTPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGATIIREAAKWSPELAAACEV
type: DOMAIN
name: RuBisCO_lsu_C
description: Ribulose bisphosphate carboxylase, large subunit, C-terminal
Protein sequence:
MSRYTGPSWKRSRRLGISLSGTGKEISRRNYAPGDHGPNNRAKVSEYGQQLKEKQKLRWMFGLNERQFQNLFIRAGKIREGKHGVNFMALLERRLDNIVYRLGLASTREQARQLVNHGHILVDGKRVDIPSYEVKVGQEISLRDKSKNLQQVKDALDAVVSRPPFVSFDDSKMTGTLVRLPERDEMEPEVDEALIVEWYNKKL

Annotated regions:
phrase: RYTGPSWKRSRRLGISLSGTGKEISRRNYAPGDHGPNNRAKVSEYGQQLKEKQKLRWMFGLNERQFQNLFIRAGKIREGKHGVNFMALL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: RYTGPSWKRSRRLGISLSGTGKEISRRNYAPGDHGPNNRAKVSEYGQQLKEKQKLRWMFGLNERQFQNLFIRAGKIREGKHGVNFMALL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: RRLDNIVYRLGLASTREQARQLVNHGHILVDGKRVDIPSYEVKVGQE
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: LERRLDNIVYRLGLASTREQARQL
type: CONSERVED_SITE
name: Ribosomal_uS4_CS
description: Small ribosomal subunit protein uS4, conserved site

phrase: RRLDNIVYRLGLASTREQARQLVNHGHILVDGKRVDIPSYEVKVGQEISLRDKSKNLQQVKDAL
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain
Protein sequence:
MPIRKVMKANEAAAWAAKLAKPKVIAAFPITPSTLIPEKISEFVANGELDAEFIKVESEHSAISACVGAAAAGVRTFTATASQGLALMHEILFIAAGMRLPIVMAIGNRALSAPINIWNDWQDTISQRDTGWMQFYAENNQEALDLILIAYKVAEDERVLLPAMVGFDAFILTHTVEPVEIPDQEVVDEFLGEYEPKHAYIDPARPITQGSLAFPAHYMESRYTVWEAMERAKKVIDEAFAEFEKKFGRKYQKIEEYKTEDADIIFVTMGSLAGTLKEWIDKKREEGYKVGAAKITVYRPFPVEEIRELAKKAKVLAFLEKNITIGLYGAVFTDASAALINESEKPLMVDFIVGLGGRDVTFNQLDEALEIAEKALKEGKVENPINWIGLRWELVK

Annotated regions:
phrase: VIAAFPITPSTLIPEKISEFVANGELDAEFIKVESEHSAISACVGAAAAGVRTFTATASQGLALMHEILFIAAGMRLPIVMAIGNRALSAPINIWNDWQDTISQRDTGWMQFYAENNQEALDLILIAYKVAEDERVLLPAMVGFD
type: DOMAIN
name: Pyrv_Fd/Flavodoxin_OxRdtase_N
description: Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain

phrase: AAKLAKPKVIAAFPITPSTLIPEKISEFVANGELDAEFIKVESEHSAISACVGAAAAGVRTFTATASQGLALMHEILFIAAGMRLPIVMAIGNRALSAPINIWNDWQDTISQRDTGWMQFYAENNQEALDLILIAYKVAEDERVLLPAMVGFDAFILTHTVEPVEIPDQEVVDEFLGEYEPKHAYIDPARPITQGSLAFPAHYMESRYTVWEAMERAKKVIDE
type: DOMAIN
name: Pyrv_Fd/Flavodoxin_OxRdtase_N
description: Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain

phrase: ADIIFVTMGSLAGTLKEWIDKKREEGYKVGAAKITVYRPFPVEEIRELAKKAKVLAFLEKNITIGLYGAVFTDASAALINESEKPLMVDFIVGLGGRDVTFN
type: DOMAIN
name: PFOR_II
description: Pyruvate:ferredoxin oxidoreductase, core domain II
Protein sequence:
MRPGSTPASRRKSRPPRRVSPPLPTTSTRSPGRPSAPEQRKAPRATPKKRFRPGTRALMEIRKYQKSTELLIRKAPFSRLVREVCMTYACGLNYSWQSMALMALQEASEAFLVRLFEDSYLCSLHAKRVTLYVQDIQLARRIRGVTEGLG

Annotated regions:
phrase: TTSTRSPGRPSAPEQRKAPRATPKKRFRPGTRALMEIRKYQKSTELLIRKAPFSRLVREVCMTYACGLNYSWQSMALMALQEASEAFLVRLFEDSYLCSLHAKRVTLYVQDIQLARRI
type: DOMAIN
name: Histone_H2A/H2B/H3
description: Histone H2A/H2B/H3
Protein sequence:
MSATPAVLRASACSACRFSALRLFVSSFATPRAPLPAARTRILSPAVTYSTFRPSPRLLASPAIEEHAEPAAQEQPNKIEDAQAEANKAEASTETSNEGGADVPWYLQVDAPTHPTLVHEPPPLPDIPEGSPKLMEPLVKFVSDELGMDNLDLLDLRAIDPPPALGPEVLMLFGTARSERHLHVSADRLVRWLRNRGISAKADGLLGRNELKTKLRRKARKAKLLGTTGLPSGADDGITTGWICVNLGTIGWSDMEMEFKDENGMTSGFGVPQSGTTIVVQLMTETRREELALEKLWSGILRRSLERQDKIDGKLPDATFTTAPDTVSRSTFLRPTPIRSSGRNRKRPDRLYFSTSARQHAKAVDVSQTDLATAMAGWEYSNASPSTIDNLLAQDTDSKVQLLFQMQDYLYSLPKDQALSAVSLCEDGSPSTFMRLFNRAIENLPSAQAWEARLWLEKAARALQHPDHGLARLGDLIQEMKLSGAADLSREKFVDFLRMIFAIPETTDAGVRQQASLSMDVIDMLFSRGEKVIEFDVVVAVIESLLRTGVRTPEARRLLTQFEDLLGEAQMDCPTEDEIIRLLDVYAHYRAWEKFWNVWRIFPRYCERRTERMYTKVYERIAAVDHQAMATDALRWCVEEMWHEQPPVRVTPAMLKALEACIRIADPEAESLAKDIDDRISDAQYMDREFVRLWLTLHGSAAWGA

Annotated regions:
Protein sequence:
MEDRRCDVLFPCSSSVDPRLTEFHGVDNSAQPTTSSEEKPRSKKKKKEREARYAFQTRSQVDILDDGYRWRKYGQKAVKNNPFPRSYYKCTEEGCRVKKQVQRQWGDEGVVVTTYQGVHTHAVDKPSDNFHHILTQMHIFPPFCLKE

Annotated regions:
phrase: SQVDILDDGYRWRKYGQKAVKNNPFPRSYYKCTEEGCRVKKQVQRQWGDEGVVVTTYQGVHTHAV
type: DOMAIN
name: WRKY_dom
description: WRKY domain

phrase: DDGYRWRKYGQKAVKNNPFPRSYYKCTEEGCRVKKQVQRQWGDEGVVVTTYQGVHT
type: DOMAIN
name: WRKY_dom
description: WRKY domain

phrase: LDDGYRWRKYGQKAVKNNPFPRSYYKCTEEGCRVKKQVQRQWGDEGVVVTTYQGVHTHA
type: DOMAIN
name: WRKY_dom
description: WRKY domain
Protein sequence:
MSEKHPGPLVVEGKLTDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPRHAMLLRCRLPGGVITTKQWQAIDKFAGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLSGNRIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDLWD

Annotated regions:
phrase: WAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGI
type: DOMAIN
name: NO2/SO3_Rdtase_4Fe4S_dom
description: Nitrite/sulphite reductase 4Fe-4S domain

phrase: ENSMACVSFPTCPLAMAE
type: BINDING_SITE
name: NO2/SO3_Rdtase_FeS/sirohaem_BS
description: Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site

phrase: TGCPNGCGRAMLAEVGLV
type: BINDING_SITE
name: NO2/SO3_Rdtase_FeS/sirohaem_BS
description: Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site

phrase: TGCPNGCGRAMLAEVG
type: BINDING_SITE
name: NO2/SO3_Rdtase_FeS/sirohaem_BS
description: Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site

phrase: NWHLTLFIENGRILDYPGRPLKTGLLEIAKIHKGDFRITANQNLIIAGVPESEKAKIEKIAK
type: DOMAIN
name: NiRdtase/SiRdtase_haem-b_fer
description: Nitrite/Sulfite reductase ferredoxin-like domain

phrase: LLRCRLPGGVITTKQWQAIDKFAGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLH
type: DOMAIN
name: NiRdtase/SiRdtase_haem-b_fer
description: Nitrite/Sulfite reductase ferredoxin-like domain
Protein sequence:
MIDSEGFRPNVGIILANDDGQVLWAKRIGHNAWQFPQGGIQFGETPEQALFRELREEIGLLPEHVQIIAQTKGWLRYRLPHRYIRSDSDPVCIGQKQKWFLLKLTAPAKNIQLNLADPPEFDEWQWVSYWYPLGQVVNFKRDVYRKAMVELCTQLPVQQLP

Annotated regions:
phrase: GGIQFGETPEQALFRELREEI
type: CONSERVED_SITE
name: NUDIX_hydrolase_CS
description: NUDIX hydrolase, conserved site

phrase: WQFPQGGIQFGETP
type: DOMAIN
name: Nudix_hydrolase
description: NUDIX hydrolase

phrase: EQALFRELREEIGLL
type: DOMAIN
name: Nudix_hydrolase
description: NUDIX hydrolase

phrase: FRPNVGIILANDDGQVLWAKRIGHNAWQFPQGGIQFGETPEQALFRELREEIGLLPEHVQIIAQTKGWLRYRLPHRYIRSDSDPVCIGQKQKWFLLKLTAPAKNIQLNLADPPEFDEWQWVSYWYPLGQVVNFKRDV
type: DOMAIN
name: NUDIX_hydrolase_dom
description: NUDIX hydrolase domain

phrase: GFRPNVGIILANDDGQVLWAKRIGHNAWQFPQGGIQFGETPEQALFRELREEIGLLPEHVQIIAQTKGWLRYRLPHRYIRSDSDPVCIGQKQKWFLLKLTAPAKNIQLNLADPPEFDEWQWVSYWYPLGQVVNFKRDVYRKAM
type: DOMAIN
name: NUDIX_hydrolase_dom
description: NUDIX hydrolase domain
Protein sequence:
MAKGQSLQDPYLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPARSVSHNNGGAAHTQQSPAVEAVADKAE

Annotated regions:
phrase: DPYLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPARS
type: DOMAIN
name: Sm
description: Sm domain
Protein sequence:
METFEESSDLDVIQKHLFEDLMIPDGFIEDFVFDDTAFVSGLWSLEPFNPVPKLEPSSPVLDPDSYVQEILQMEAESSSSSSTTTSPEVETVSNRKKTKRFEETRHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAYDYAAFKLRGRKAVLNFPLDAGKYDAPVNSCRKRRRTDVPQPQGTTTSTSSSSSN

Annotated regions:
phrase: HYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAYDYAAFKLRGRKAVLNF
type: DOMAIN
name: AP2/ERF_dom
description: AP2/ERF domain

phrase: HYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAYDYAAFKLRGRKAVLNFPLDAGK
type: DOMAIN
name: AP2/ERF_dom
description: AP2/ERF domain

phrase: YRGVRRRPWGK
type: DOMAIN
name: AP2/ERF_dom
description: AP2/ERF domain

phrase: AYDYAAFKLRGRKAVLNFPL
type: DOMAIN
name: AP2/ERF_dom
description: AP2/ERF domain

phrase: HYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAYDYAAFKLR
type: DOMAIN
name: AP2/ERF_dom
description: AP2/ERF domain

phrase: HYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAYDYAAFKLRGRKAVLNF
type: DOMAIN
name: AP2/ERF_dom
description: AP2/ERF domain
Protein sequence:
MREVNFSIPNVNKASVNITTTLYDRRALDCTSTLPLINSLNHLAYLTTSSARIRDILTVDGGIERLVCILKEGRSRDLMEMWKWSLAFQCVVNIGVRGSESVRTRVVEADMVPVIATILDNYIKVVDKARARADPDTQRHSSRHHAKPVPTAGEPSARPSLLEQAAHTEQRASRRQAPPPNIEIPPYFQDNHVADSNAMDISSSPRAPMTSPPERSTFGQEAHNHRTHDPRYLHPGHRQRAMQPLATALPPMDAADGFGLRPVRDTERLPSMLPGLQNGITSQPDSPTTPSGPIQARNNAATTVPVQRPTLRQQRSASGDSDDGNAESFSMEDGARSEATSEPIVQNQMEIDEVGDRQAMLNGVSDGHDLTVTDPSEGQEAETFNITHRSTVDGSTINNGNTQTNTALGLSPAQAANTTNSPNIVPSPYSLYFRDRSATASQNVLTTMPRDEDVLMSLQLLAYVSKYCNLRSYFQNSHFVPKLKVDRELQMFEDGSSPMETAEEEDEYLLPDDVNIFPLVEKFTVRHHSKDMQYWACVVMRNLCRKDESRGGIRQCAYYKCGKWEEFQRQFAKCRRCRRTKYCSKDCQKAAWVYHRHWCHTTP

Annotated regions:
phrase: KCGKWEEFQRQFAKCRRCRRTKYCSKDCQKAAWVYHRHW
type: DOMAIN
name: Znf_MYND
description: Zinc finger, MYND-type

phrase: YYKCGKWEEFQRQFAKCRRCRRTKYCSKDCQKAAWVYHRHW
type: DOMAIN
name: Znf_MYND
description: Zinc finger, MYND-type