nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MRVKGIQRNYQQWWTWGSLGLWMLLICNVMGNLWVTVYYGVPVWKEAKTTLFCASDAKAYETEAHNVWATHACVPTDPSPQEIELKNVTENFNMWKNDMVDQMHQDIISLWDESLKPCVKLTPLCVTLNCSNVTAINSNGTAINITESIKGEMKNCSFKATTEIKDKKKKEYALFYRLDILPLNKENKGSSGKYRLINCNTSAITQACPKVSFDPIPIHYCAPAGFAILKCNNKTFNGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEKVVIRSENITNNAKTIIVQFDSPVKINCTRPGNNTRKSVRIGPGQTFYATGDIIGDIRQAHCNISGKEWNKTLQAVGKKLAEYYPNKTINFTQASGGDLEIVTHSFNCGGEFFYCNTSGLFNSTYNPSYNSTESVNETTIILPCKIKQIINMWQEVGRAMYANPIAGNITCNSNITGLLLTRDGGVNETTETEIFRPGGGNMKDNWRSELYKYKVVEIKPLGVAPTKAKRRVVEREKRAVGIGAVFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQTRVLAIERYLQVQQLLGIWGCSGKLICTTSVPWNSSWSNKSQGEIWDNMTWMQWDREISNYSDTIYRLLEESQNQQEQNEKDLLALDKWQNLWSWFNISNWLWYIKIFIMIVGGLIGLRIIFAILSIVNRVRQGYSPLSFQTLIPNPRGPDRPGEIEEGGGEQDRDTSTRLVSGFFALAWDDLRSLCIFLYHHL

Annotated regions:
phrase: VQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQTRVLAIERYLQVQQLLGIWGCSGKLICTTSVPWNSSWSNKSQGEIWDNMTWMQWDREISNYSDTIYRLLEESQNQQEQNEKDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKEAKTTLFCASDAKAYETEAHNVWATHACVPTDPSPQEIELKNVTENFNMWKNDMVDQMHQDIISLWDESLKPCVKLTPLCVTLNCSNVTAINSNGTAINITESIKGEMKNCSFKATTEIKDKKKKEYALFYRLDILPLNKENKGSSGKYRLINCNTSAITQACPKVSFDPIPIHYCAPAGFAILKCNNKTFNGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEKVVIRSENITNNAKTIIVQFDSPVKINCTRPGNNTRKSVRIGPGQTFYATGDIIGDIRQAHCNISGKEWNKTLQAVGKKLAEYYPNKTINFTQASGGDLEIVTHSFNCGGEFFYCNTSGLFNSTYNPSYNSTESVNETTIILPCKIKQIINMWQEVGRAMYANPIAGNITCNSNITGLLLTRDGGVNETTETEIFRPGGGNMKDNWRSELYKYKVVEIKPLGVAPTKAKRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: MGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQTRVLAIERYLQVQQLLGIWGCSGKLICTTSVPWNSSWSNKSQGEIWDNMTWMQWDREISNYSDTIYRLLEESQNQQEQNEKDLLALDKWQNLWSWFNISNWLWYIKIFIMIVGGLIGLRIIFAILSIVNRVRQGYSPLSFQT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MKLRKILDNISATNVVGSLDKNILDITNNSQKVVEGSAFFAVKGIQFDGVKFVDDAISRGAKVVFHESDIEKYQDGITYVKVENLRKKEPFITSFFYGNPEKEIAIIGVTGTNGKSSTVSIIHFLLNRLGKKCGAVGTIAYDDGKDIYTPTHTTPDSFVLSKLFRSMVNNGCNYCVMEVSSHSLVMDRVSHIKFDRVLFTNISQDHLDFHVDMKSYAEAKSILLNNLLKKDGVRIISKPRDYYNILLSKVDDRDIVIDGKKIKIDSVEQSDKGTIFNLVWDKDFVTIESKLFGKFQSENLALSYLALKSLGFKSKDILENIKRFKNISGRMERVGEKKLIFIDYAHTPEALKKVLETAKDIPHSKIITVFGCGGDRDRSKRGIMGNIATTYSDLSIITDDNPRFEDSDKIISDIEKGVVKGSLYKIVSNRREAIRTAIGEMNRDDILIIAGKGHENYQDICGVKRVFSDRDTVLEFLNDKH

Annotated regions:
phrase: GRMERVGEKKLIFIDYAHTPEALKKVLETAKDIPHSKIITVFGCGGDRDRSKRGIMGNIATTYSDLSIITDDNPRFEDSDKIISDIEKGVVKGSLYKIVSNRREAIRTAIGEMNRDDILIIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: IGVTGTNGKSSTVSIIHFLLNRLG
type: CONSERVED_SITE
name: Folylpolyglutamate_synth_CS
description: Folylpolyglutamate synthetase, conserved site

phrase: VTGTNGKSSTVSIIHFLLNRLGKKCGAVGTIAYDDGKDIYTPTHTTPDSFVLSKLFRSMVNNGCNYCVMEVSSHSLVMDRVSHIKFDRVLFTNISQDHLDFHVDMKSYAEAKSILLNNLLKKDGVRIISKPRDYYNILLSKVDDRDIVIDGKKIKIDSVEQSDKGTIFNLVWDKDFVTIESKLFGKFQSENLALSYL
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: ITNNSQKVVEGSAFFAVKGIQFDGVKFVDDAISRGAKVVFHESD
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain
Protein sequence:
MTDVTIKTLAAERQTSVERLVQQFADAGIRKSADDSVSAQEKQTLIDHLNQKNSGPDKLTLQRKTRSTLNIPGTGGKSKSVQIEVRKKRTFVKRDPQEAERLAAEEQAQREAEEQARREAEESAKREAQQKAEREAAEQAKREAAEQAKREAAEKDKVSNQQDDMTKNAQAEKARREQEAAELKRKAEEEARRKLEEEARRVAEEARRMAEENKWTDNAEPTEDSSDYHVTTSQHARQAEDESDREVEGGRGRGRNAKAARPKKGNKHAESKADREEARAAVRGGKGGKRKGSSLQQGFQKPAQAVNRDVVIGETITVGELANKMAVKGSQVIKAMMKLGAMATINQVIDQETAQLVAEEMGHKVILRRENELEEAVMSDRDTGAAAEPRAPVVTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETENGMITFLDTPGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAVNKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDELLDAILLQAEVLELKAVRKGMASGAVIESFLDKGRGPVATVLVREGTLHKGDIVLCGFEYGRVRAMRNELGQEVLEAGPSIPVEILGLSGVPAAGDEVTVVRDEKKAREVALYRQGKFREVKLARQQKSKLENMFANMTEGEVHEVNIVLKADVQGSVEAISDSLLKLSTDEVKVKIIGSGVGGITETDATLAAASNAILVGFNVRADASARKVIEAESLDLRYYSVIYNLIDEVKAAMSGMLSPELKQQIIGLAEVRDVFKSPKFGAIAGCMVTEGVVKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVKNYNDVRTGDVIEVFEIIEIQRTIA

Annotated regions:
phrase: ASGAVIESFLDKGRGPVATVLVREGTLHKGDIVLCGFEYGRVRAMRNELGQEVLEAGPSIPVEILGLSGVPAAGDEVTV
type: DOMAIN
name: EF-G-like_DII
description: Elongation factor G-like, domain II

phrase: VVTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETENGMITFLDTPGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAVNKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDELLDA
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: GAIAGCMVTEGVVKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIGVKNYNDVRTGDV
type: DOMAIN
name: EFTu-like_2
description: Translation elongation factor EFTu-like, domain 2

phrase: MTDVTIKTLAAERQTSVERLVQQFADAGIRKSADDSVSAQEKQTLIDHL
type: DOMAIN
name: IF2_N
description: Translation initiation factor IF-2, N-terminal

phrase: ETITVGELANKMAVKGSQVIKAMMKLGAMATINQVIDQETAQLVAEEMGH
type: DOMAIN
name: IF2_N
description: Translation initiation factor IF-2, N-terminal

phrase: KLARQQKSKLENMFANMTEGEVHEVNIVLKADVQGSVEAISDSLLKLSTDEVKVKIIGSGVGGITETDATLAAASNAILVGFNVRADASARKVIEAESLDLRYYSVIYNLIDEV
type: DOMAIN
name: TIF_IF2_dom3
description: Translation initiation factor IF- 2, domain 3

phrase: VVTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETENGMITFLDTPGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAVNKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDELLDAI
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: PDKLTLQRKTRSTLNIPGTGGKSKSVQIEVRKKRTFVK
type: DOMAIN
name: IF2_assoc_dom_bac
description: Initiation factor 2 associated domain, bacterial

phrase: PRAPVVTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETENGMITFLDTPGHAAFTSMRARGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAVNKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDELLDAILLQAEVLEL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: ASGAVIESFLDKGRGPVATVLVREGTLHKGDIVLCGFEYGRVRAMRNELGQEVLEAGPSIPVEILGLSGVPAAGDEVTVVRDEKKAREVALYR
type: DOMAIN
name: IF2_II
description: Translation initiation factor IF-2, domain II
Protein sequence:
MSNQFNTRKRLMAMLANEMRLEQEENAIAKQSAKFHSKFATTMENIKRQQHESKKLNTLLNQRRDEVEKRNALKNAVRDKLAEEEQHCAEMQAQLGKKKQERDKLIACAHILSEAANTYINRKALPERVKGVAVSPDNGQWIPFDFNAHDRQGLAALWTQVNRSSRNINKWRQLSSVGNSSMPAPSGKENANVSMTSVIEIDLTSPPSQK

Annotated regions:
Protein sequence:
MLANKNILVGITGGIAAYKSIELIRLLKKANAEVRVVLTPAAAEFVTPLTLQAISGNAVSTSLLDPQAELAMGHIELAKWADLVVIAPASADFIARLRIGMGNDLLSTLCLATPAPILLAPAMNQQMYKRSAVQENLQKVREQGVLTIGPNSGFQACGDVGEGRMAEPAEIFAEIQQILTACGDLAELSVVITAGGTQEPIDPVRYISNHSSGKMGYAIAENFAKRGAKVVLISGVTNLPTPQNVERVDVVSAQEMFEQAVKFASKSAIFIGCAAVADYRVANVSDQKIKKTDDSDELTLKLVKNPDIIATVAKMKENRPFVVGFAAETQNVAEYAKSKLERKNLDMICANDVSGGQVFGQDHNSLHLFWKNGEKKLPLADKNQLAKQLVQEISEQFTKGKTK

Annotated regions:
phrase: KNILVGITGGIAAYKSIELIRLLKKANAEVRVVLTPAAAEFVTPLTLQAISGNAVSTSLLDPQAELAMGHIELAKWADLVVIAPASADFIARLRIGMGNDLLSTLCLATPAPILLAPAMNQQMYKRSAVQENLQKVREQGVLTIGPNSGFQACGDVGEGRMAEPAEIFAEIQQ
type: DOMAIN
name: Flavoprotein
description: Flavoprotein

phrase: AELSVVITAGGTQEPIDPVRYISNHSSGKMGYAIAENFAKRGAKVVLISGVTNLPTPQNVERVDVVSAQEMFEQAVKFASKSAIFIGCAAVADYRVANVSDQKIKKTDDSDELTLKLVKNPDIIATVAKMKENRPFVVGFAAETQNVAEYAKSKLERKNLDMICANDVSGGQVFGQDHNSLH
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal
Protein sequence:
MFSLVPETRMNRSIPVEVDESEPYPSQLLKPIPEYSLEEESEPPVPNIGNMAPNSLSAPKDPLHSPGDIPQVHPPLKLANQYQPMSQQISCLRSKVLEETEDSFFRRHPDPGKDFSSGSSAASEPEPESVVGALPLQHQFSFMEKRHRWLESQLSAASPDTGHDSDKSDQSLSNASADSSGSSQDTMPPPQPHRNRAAPDVPTIDTGYDSQPQDVLGIRQLERPLPLTSVCCFQDLPGPLRSREFPQFEQRYPACAQMLPPNPSPHAPWNYCHCPGTCLPRVPYGHNYPRAAYQQVIQPALPGQPLPGTTVRGLPPVQKVIPNYPSPWHQEERPIQRDFSFPGLPRCQDQQYHQPPNGAGAPKESLEHPAELRPQGPQAPPPVAVPRPPSNPPVRGTLKTSNLPEELRKVFITYSMDTAMEVVKFVNFLLVNGFQTAIDIFEDRIRGIDIIKWMERYLRDVSTFQNSENFCWRVRQ

Annotated regions:
phrase: RKVFITYSMDTAMEVVKFVNFLLVNGFQTAIDIFEDRIRGIDIIKWMERYLRD
type: DOMAIN
name: SEFIR_dom
description: SEFIR domain

phrase: LRKVFITYSMDTAMEVVKFVNFLLVNGFQTAIDIFEDRIRGIDIIKWMERYLRDVSTFQNSENFCWRVR
type: DOMAIN
name: SEFIR_dom
description: SEFIR domain
Protein sequence:
MNAHKLTHLKQLESESIHIFREVVSEFERPVMLYSIGKDSAVMLHLAMKAFYPGKPPFPLMHVDTTWKFRDMIAFRDRRAQELGLDLIIHVNEEGVRQGINPFVHGSKKHTDIMKTEGLKQALDKYRFDAAFGGARRDEEKSRAKERVYSFRDRHHRWDPKNQRPELWNLYNGKINKGESIRVFPLSNWTELDVWQYIYLEDIPIVPLYFAAERPVVERDGMLIMVDDERMPLLPGEVPMRKKVRFRTLGCYPLTGAIESDAATLPEIIQEMLLTRTSERQGRLIDHDQAGSMEEKKKEGYF

Annotated regions:
phrase: PVMLYSIGKDSAVMLHLAMKAFYPGKPPFPLMHVDTTWKFRDMIAFRDRRAQELGLDLIIHVNEEGVRQGINPFVHGSKKHTDIMKTEGLKQALDKYRFDAAFGGARRDEEKSRAKERVYSFRDRHHRWDPKNQRPELWNLYNGKINKGESIRVFPLSNWTELDVWQYIYLEDIPIVPLYFAAERPVVERDGMLIMVDDERMPLLPGEVPMRKKVRFRTLGCYPLT
type: DOMAIN
name: PAPS_reduct
description: Phosphoadenosine phosphosulphate reductase
Protein sequence:
MSLLAMGKAAREASFELAVAATARKNQALLAMAEELELQQDVILAANAKDIEAGRSSGLTDAMLDRLLLNESRLAGIVADVRKVVTLDDPVGSEIDSRVLENGMRLSRRRVPIGVIGVIYEARPNVTIDIAALCLKTGNASILRGGRETFNSNMALVKVIQAALAKTGLPAASVQYIESPDRALVSELLTMDQYVDMIIPRGGANLHRLCKDQSTIPVIIGGFGVSHLYVDESADLIRAIDVIDNAKVQRPSACNSLDTLLLNEKIAAEIVPALVARMNQQKVTLVAEPKAFALLQAAGAEQLRAAGAEDFDTEWLSLTLGVKVVADVKAAIAHLQEHNACHSDAILTNDLKCAEYFINAAGSAAVYVNASTRFTDGAQFGLGAEVAVSTQKLHARGPMGLTELTSYKWIGQADYLSRS

Annotated regions:
phrase: SLLAMGKAAREASFELAVAATARKNQALLAMAEELELQQDVILAANAKDIEAGRSSGLTDAMLDRLLLNESRLAGIVADVRKVVTLDDPVGSEIDSRVLENGMRLSRRRVPIGVIGVIYEARPNVTIDIAALCLKTGNASILRGGRETFNSNMALVKVIQAALAKTGLPAASVQYIESPDRALVSELLTMDQYVDMIIPRGGANLHRLCKDQSTIPVIIGGFGVSHLYVDESADLIRAIDVIDNAKVQRPSACNSLDTLLLNEKIAAEIVPALVARMNQQKVTLVAEPKAFALLQAAGAEQLRAAGAEDFDTEWLSLTLGVKVVADVKAAIAHLQEHNACHSDAILTNDLKCAEYFINAAGSAAVYVNASTRFTDGAQFGLGAEVAVSTQKLHARGPMGLTELTSYKWIGQADYLS
type: DOMAIN
name: GPR_dom
description: GPR domain

phrase: KAAREASFELAVAATARKNQALLAMAEELELQQDVILAANAKDIEAGRSSGLTDAMLDRLLLNESRLAGIVADVRKVVTLDDPVGSEIDSRVLENGMRLSRRRVPIGVIGVIYEARPNVTIDIAALCLKTGNASILRGGRETFNSNMALVKVIQAALAKTGLPAASVQYIESPDRALVSELLTMDQYVDMIIPRGGANLHRLCKDQSTIPVIIGGFGVSHLYVDESADLIRAIDVIDNAKVQRPSACNSLDTLLLNEKIAAEIVPALVARMNQQKV
type: DOMAIN
name: Aldehyde_DH_dom
description: Aldehyde dehydrogenase domain

phrase: AREASFELAVAATARKNQALLAMAEELELQQDVILAANAKDIEAGRSSGLTDAMLDRLLLNESRLAGIVADVRKVVTLDDPVGSEIDSRVLENGMRLSRRRVPIGVIGVIYEARPNVTIDIAALCLKTGNASILRGGRETFNSNMALVKVIQAALAKTGLPAASVQYIESPDRALVSELLTMDQYVDMIIPRGGANLHRLCKDQSTIPVIIGGFGVSHLYVDESADLIRAIDVIDNAKVQRPSACNSLDTLLLNEKIAAEIVPALVARMNQQKVTLVAEPKAFALLQAAGAEQLRAAGAEDFDTEWLSLTLGVKVVADVKAAIAHLQEHNACHSDAILTNDLKCAEYFINAAGSAAVYVNASTRFTDGAQFGLGAEVAVSTQKLHARGPMGLTELTSY
type: DOMAIN
name: GPR_dom
description: GPR domain

phrase: AMGKAAREASFELAVAATARKNQALLAMAEELELQQDVILAANAKDIEAGRSSGLTDAMLDRLLLNESRLAGIVADVRKVVTLDDPVGSEIDSRVLENGMRLSRRRVPIGVIGVIYEARPNVTIDIAALCLKTGNASILRGGRETFNSNMALVKVIQAALAKTGLPAASVQYIESPDRALVSELLTMDQYVDMIIPRGGANLHRLCKDQSTIPVIIGGFGVSHLYVDESADLIRAIDVIDNAKVQRPSACNSLDTLLLNEKIAAEIVPALVARMNQQKVTLVAEPKAFALLQAAGAEQLRAAGAEDFDTEWLSLTLGVKVVADVKAAIAHLQEHNACHSDAILTNDLKCAEYFINAAGSAAVYVNASTRFTDGAQFGLGAEVAVSTQKLHARGPMGLTELTSYKWIGQA
type: DOMAIN
name: GPR_dom
description: GPR domain
Protein sequence:
MSKRIIQLILLSAFARANYVEPFKSNPYIACSEASHCPKEWPCCSQYGQCGSGPLCISGCNPKFSHSPESCVPVPALLPQLEIVASDDKGVYLEMSGQPALVTKFQRKSSAQLLEVHHEEQQYGVSALEQDLNSRGLIHFPDYMITSKPKVAREMLEQYDFIHSGFISVDGKSESLILGMPKKTTGSLISSSKVFLYGRAAVTMKTSRGPGVITAIVFMSSTQDEIDYEFVGSELHTVQTNYYYQGELNHSRMRRHSLPSNSHEEYHIYEVDWDAERIHWMVDGEIVRTLYKRDTWDPVHKIYKYPQTPMMLQISLWPAGTPDAPQGTIEWAGGLIDWENAPDIKAHGQLAAQIQRVAITPYNNDFCPEIHESMGQWGAQNSEEEPFRVAYGYESNNGRFDPKKLKWYTDARLHLSSWHATGIKPTAAQRQQHHRRSLPHVEAPPITNTM

Annotated regions:
phrase: SPESCVPVPALLPQLEIVASDDKGVYLEMSGQPALVTKFQRKSSAQLLEVHHEEQQYGVSALEQDLNSRGLIHFPDYMITSKPKVAREMLEQYDFIHSGFISVDGKSESLILGMPKKTTGSLISSSKVFLYGRAAVTMKTSRGPGVITAIVFMSSTQDEIDYEFVGSELHTVQTNYYYQGELNHSRMRRHSLPSNSHEEYHIYEVDWDAERIHWMVDGEIVRTLYKRDTWDPVHKIYKYPQTPMMLQISLWPAGTPDAPQGTIEWAGGLIDWENAPDIKA
type: DOMAIN
name: GH16
description: Glycoside hydrolase family 16

phrase: QYDFIHSGFISVDGKSESLILGMPKKTTGSLISSSKVFLYGRAAVTMKTSRGPGVITAIVFMSSTQDEIDYEFVGSELHTVQTNYYYQGELNHSRMRRHSLPSNSHEEYHIYEVDWDAERIHWMVDGEIVRTLYKRDTWDPVHKIYKYPQTPMMLQISLWPAGTPDAPQGTIEWA
type: DOMAIN
name: GH16
description: Glycoside hydrolase family 16
Protein sequence:
MERLQKVIAHAGVASRRKAEELIKEGKVKVNGKVVTELGVKVTGSDQIEVNGLKVEREEPVYFLLYKPRGVISAAQDDKGRKVVTDFFKNIPQRIYPIGRLDYDTSGLLLLTNDGEFANKLMHPKYEIDKTYVAKVKGIPPKELLRKLERGIRLEEGKTAPAKAKLLSLDKKKQTSIIQLTIHEGRNRQVRRMFEAIGHEVIKLKREEYAFLNLRGLHTGDARELTPHEVKRLRALADHGKNAF

Annotated regions:
phrase: GRLDYDTSGLLLLT
type: CONSERVED_SITE
name: PsdUridine_synth_RsuA/RluB_CS
description: Pseudouridine synthase, RsuA/RluB/E/F, conserved site

phrase: YFLLYKPRGVISAAQDDKGRKVVTDFFKNIPQRIYPIGRLDYDTSGLLLLTNDGEFANKLMHPKYEIDKTYVAKVKGIPPKELLRKLERGIRLEEGKTAPAKAKLLSLDKKKQTSIIQLTIHEGRNRQVRRMFE
type: DOMAIN
name: PsdUridine_synth_RsuA/RluA
description: Pseudouridine synthase, RsuA/RluA-like

phrase: ERLQKVIAHAGVASRRKAEELIKEGKVKVNGKVVTELGVKVTGSDQ
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: ERLQKVIAHAGVASRRKAEELIKEGKVKVNGKVVTELGVKVTGSDQIEVNGLKVEREEPVY
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain
Protein sequence:
MRVFEQKRIVLGVTGSIAAYKSVTLASSLTKAGALVDVILTDAATKLVAPITFSSVTGRKAYIDEDLWKVDDHVLHIELGEKNDAFLIAPATANTIAKIARGMADNLLSLTALASRTSPLIAPAMDGGMYSHPATQNNLDLLNKRGVGILGPAAGHLASGLSGIGRMLEPDQLLGHLRCWLGRNGILKGKKVLITAGGTQEPIDPVRVISNRSSGKQGFAIAQAALDQGAEVILISAPVVLSLPVGARLITVKTASEMAEAVFAESGNADILIMAAAVADYKPTREADQKIKKDQGGLDAIQLERTVDILKEVANNRAKNKIGPAVVIGFAAETENLLENAKSKLENKNLDLIAANDVSRQDRGIGSDKNQVTLIWKDGQTRELPVMDKSDISDELILEAAKLLV

Annotated regions:
phrase: KRIVLGVTGSIAAYKSVTLASSLTKAGALVDVILTDAATKLVAPITFSSVTGRKAYIDEDLWKVDDHVLHIELGEKNDAFLIAPATANTIAKIARGMADNLLSLTALASRTSPLIAPAMDGGMYSHPATQNNLDLLNKRGVGILGPAAGHLASGLSGIGRMLEPDQLL
type: DOMAIN
name: Flavoprotein
description: Flavoprotein

phrase: LKGKKVLITAGGTQEPIDPVRVISNRSSGKQGFAIAQAALDQGAEVILISAPVVLSLPVGARLITVKTASEMAEAVFAESGNADILIMAAAVADYKPTREADQKIKKDQGGLDAIQLERTVDILKEVANNRAKNKIGPAVVIGFAAETENLLENAKSKLENKNLDLIAANDVSRQDRGIGSDKNQVTL
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal
Protein sequence:
MRVGVLTGGGDCPGLNAVIRAVVRKGVKEYGDEFVGFRDGWKGPLEGLTMPLGIDQVRGILPRGGTILGSSRTNPFSIEGGVEQIKANLAAAGVDALIAIGGEDTLGVATKLHDLGVKVVGVPKTIDNDLSGTDFTFGFDTAVNIASEAIDRLHTTAESHHRVLVVEVMGRHAGWIALHAGIAGGANVVLIPERPFDIEEVCRYVETRFETKYAVIMVVSEGAVPIEAEDDSGMTLLTGEKDAFGHVRLGGIGERLANEIEARTGKEARAVVLGHIQRGGTPTAFDRWLATRFGLQAIGAVHDGDFGTMMALRGTSIVRVPLSEGTAELKLVSPEEYAEAEVFFG

Annotated regions:
phrase: RVGVLTGGGDCPGLNAVIRAVVRKGVKEYGDEFVGFRDGWKGPLEGLTMPLGIDQVRGILPRGGTILGSSRTNPFSIEGGVEQIKANLAAAGVDALIAIGGEDTLGVATKLHDLGVKVVGVPKTIDNDLSGTDFTFGFDTAVNIASEAIDRLHTTAESHHRVLVVEVMGRHAGWIALHAGIAGGANVVLIPERPFDIEEVCRYVETRFETKYAVIMVVSEGAVPIEAEDDSGMTLLTGEKDAFGHVRLGGIGERLANEIEARTGKEARAVVLGHIQRGGTPTAFDRWLATRFGLQAIG
type: DOMAIN
name: Phosphofructokinase_dom
description: Phosphofructokinase domain

phrase: RAVVLGHIQRGGTPTAFD
type: CONSERVED_SITE
name: Phosphofructokinase_CS
description: Phosphofructokinase, conserved site
Protein sequence:
MQDTAIEKVVTKTNLMNFCQKDLQAYFASIDEKPFRAKQVFKWIHQKGITSFDDMSDLSKALRQKLMDVAEVVAPKVVLDKPSNDGTHKWLIDVGGNLVETVYIPEGSRGTLCVSSQVGCTLNCSFCSTGKQGFNRNLTVAEIIGQVWTAVRALSKQQGEHDRHVTNVVMMGMGEPLMNFDAVVSAMDIMMDDLAYGLSKRRVTLSTSGVVPRIYDLLEQSDVSLAVSLHAPNDALRNELVPINKKYNIDELMAACKLYAQRGPHKEITFEYTLMEHVNDELEHAKELVTLLKSKQVPAKINLIPFNPYPGTPYKKPSNNRTHRFQQYLMEAGFVATIRKTRGDDIDAACGQLAGKVQDKTKRQARYQRSLSEA

Annotated regions:
phrase: SSQVGCTLNCSFCSTGKQGFNRNLTVAEIIGQVWTAVRALSKQQGEHDRHVTNVVMMGMGEPLMNFDAVVSAMDIMMDDLAYGLSKRRVTLSTSGVVPRIYDLLEQSDVSLAVSLHAPNDALRNELVPINKKYNIDELMAACKLYAQRGPHKEITFEYTLMEHVNDELEHAK
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TKTNLMNFCQKDLQAYFASIDEKPFRAKQVFKWIHQKGITSFDDMSDLSKALRQKLMDVAEVVAPKVVLDKPSNDGTHKWLIDVGGNLVETVYIPEGSRGTLCVSSQVGCTLNCSFCSTGKQGFNRNLTVAEIIGQVWTAVRALSKQQGEHDRHVTNVVMMGMGEPLMNFDAVVSAMDIMMDDLAYGLSKRRVTLSTSGVVPRIYDLLEQSDVSLAVSLHAPNDALRNELVPINKKYNIDELMAACKLYAQRGPHKEITFEYTLMEHVNDELEHAKELVTLLKSKQVPAKINLIPFNPYPGTPYKKPSNNRTHRFQQYLMEAGFVATIRKTRGDDIDAACGQLAGKVQDKTKRQ
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: EGSRGTLCVSSQVGCTLNCSFCSTGKQGFNRNLTVAEIIGQVWTAVRALSKQQGEHDRHVTNVVMMGMGEPLMNFDAVVSAMDIMMDDLAYGLSKRRVTLSTSGVVPRIYDLLEQSDVSLAVSLHAPNDALRNELVPINKKYNIDELMAACKLYAQRGPHKEITFEYTLMEHVNDELEHAKELVTLLKSKQVPAKINLIPFNPYPGTPYKKPSNNRTHRFQQYLMEAGFVATIRKTRGD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: GTLCVSSQVGCTLNCSFCSTGKQGFNRNLTVAEIIGQVWTAVRALSKQQGEHDRHVTNVVMMGMGEPLMNFDAVVSAMDIMMDDLAYGLSKRRVTLSTSGVVPRIYDLLEQSDVSLAVSLHAPNDALRNELVPINKKYNIDELMAACKLYAQRGPHKEITFEYTLMEHVNDELEHAKELVTLLKSKQVPAKINLIPFNPYPGTPYKKPSNNRTHRFQQYLM
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: TNLMNFCQKDLQAYFASIDEKPFRAKQVFKWIHQKGITSFDDMSDLSKALRQKLMDVAE
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MPASVTPPTDPGRRDDGPPRASRRQDGRGTRDDSPAPKPWRTEGMPEGGDPKKGTNWKWLALVMGLLWLLLFGVMQMQNAANAPREITYTEFTKQLQAKNVEKVQSKGDSFNGTLRADAAYPGEQGVTYKTFTTERPTWAKDDIDAMLKASNATISAKPVAEEASVFWTLLISFGPILLIVGLWILVLRKSRSMMTGGLMGGNKKKAPVDPESVRVTFDDVAGIDEVENEIYEIVDFLKNPDKYRRLGARAPKGVLLAGQPGTGKTLLARATAGEAEVPFFSASASEFIEMIVGVGAQRVRELFEEARKVAPSIIFIDEIDTIGRARGGSRAMGGHDEREQTLNQILTEMDGFSGSEGVVVLAATNRADVLDPALLRPGRFDRTIQVHAPDAKGREQILQVHTRGVPLGKDVDLTAIAKATPGMTGAELANLVNEAALAAARQGADDVTQPFLSEALEKVQLGAARNVVMPPEERRRTAYHEAGHALLGMLQPGADPVRKVSIIPRGRALGVTLSTPDDDRYGYDEEYLRGRIIGALGGMAAEELIFGVITTGAESDLDSSTNIARSMVGRWGMSESVGPVQIYPNEGDPRSAGFSEDILARADEEVRRIVDECYREAVRLLREHRDKLERITAAVLEKETLDEAEVYAAAGIERPSPEEIASPIQGSAEVPERDSAPTRVDEPTRFPDSGEAPQTGEVHTGEATTIGEAPPQVDGPAPAPRPWDEHTGGSHAARPTD

Annotated regions:
phrase: VVVLAATNRADVLDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: DVDLTAIAKATPGMTGAELANLVNEAALAAARQGADDVT
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: WKWLALVMGLLWLLLFGVMQMQNAANAPREITYTEFTKQLQAKNVEKVQSKGDSFNGTLRADAAYPGEQGVTYKTFTTERPTWAKDDIDAMLKASNATISAK
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular

phrase: APKGVLLAGQPGTGKTLLARATAGEAEVPFFSASASEFIEMIVGVGAQRVRELFEEARKVAPSIIFIDEIDTIGRARGGSRAMGGHDEREQTLNQILTEMDGFSGSEGVVVLAATNRADVLDPALLRPGRFDRTIQVHAP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VMPPEERRRTAYHEAGHALLGMLQPGADPVRKVSIIPRGRALGVTLSTPDDDRYGYDEEYLRGRIIGALGGMAAEELIFGVITTGAESDLDSSTNIARSMVGRWGMSESVGPVQIYPNEGDPRSAGFSEDILARADEEVRRIVDECYREAVRLLREHRDKLERITAAVLEKETLDEAEV
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: VLLAGQPGTGKTLLARATAGEAEVPFFSASASEFIEMIVGVGAQRVRELFEEARKVAPSIIFIDEIDTIGRARGGSRAMGGHDEREQTLNQILTEMDGFSGSEGVVVLAATNRADVLDPALLRPGRFDRTIQ
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core
Protein sequence:
MENEAGQLVDLYVPRKCSATNRIIQAKDHASVQINVCAVDAEGRQIPGEKTTYAISGFVRSKGESDDCINRLTTQDGLLEGVWSYQR

Annotated regions:
phrase: LYVPRKCS
type: CONSERVED_SITE
name: Ribosomal_eS21_CS
description: Small ribosomal subunit protein eS21, conserved site
Protein sequence:
MAKELFLEIGTEEIPAGFLPKAMADMEGLIRKELESARIGFGEVKTMATPRRLALVVKNVSAQQTDAEITTMGPAKKVAFNDDGTTTKAGEGFARGQGVDASALSIIATEKGEYVAVTKKEIGVATAGLLAEILPRLINNIPFKKSMRWGDQEVRFARPMHWIVALFDGTVIPFAFGNVQSGSMSRGHRFMANTSFPVRDFGHYLEECERHFVIPDPAKRKEIISREIERVAKAAGGNVLPDEGLLEQVTYLVEYPSAVHGTFSAEFLAVPKEVLITSMREHQRYFSLVDDKGKLLPGFITINNTLTEDPSVVVKGNEMVLRARLSDARFFFEEDKKVPLEKRVEALKSVLYQAKLGTSYEKMERFRTLAEGLAEQLQPPLKAKVFQAATLCKADLVTGMVGEFPEVQGIMGREYALLQGVDAEVARAIAEHYLPNQAGGELPASDTGAFVSIADKVDTICGCFSVGLIPSGSADPYALRRAALGIINIILAKGYNLPLIPLVTKAIGQLEGRLTRKKEEVLADVLDFFKGRFINLLTDRFPADVVEAVVAVSFDNLVEATAKIEALAQFKKRDDFEPLAVAFKRVCNIVKEQVTVPVDDKLFQDAAEGTLFQSFKSASSMVEEKVVQREYLAALTQIASLKGAVDDFFDKVMVMAEDEGVRNNRLALLQEIKSLFRDIADFGKLTA

Annotated regions:
phrase: AFKRVCNIVKEQVTVPVDDKLFQDAAEGTLFQSFKSASSMVEEKVVQREYLAALTQIASLKGAVDDFFDKVMVMAEDEGVRNNRLALLQEIKSLFR
type: DOMAIN
name: DALR_anticod-bd
description: DALR anticodon binding
Protein sequence:
FVNQHLXGSHLVEALYLVXGERGFFYTPKAGIVEQXXASVXSLYQLENYXN

Annotated regions:
phrase: QHLXGSHLVEALYLVXGERGFFYTP
type: DOMAIN
name: Insulin-like
description: Insulin-like

phrase: QHLXGSHLVEALYLVXGERGFFYTPKAGIVEQXXASVXSLYQLENY
type: DOMAIN
name: Insulin-like
description: Insulin-like
Protein sequence:
MSIKTIILAAGQGTRMRSSRPKVLHEIANKALLQHVYETSLALENNQIFIIYGHGGETVKQTLSSLNATWIEQKQQLGTGHAVQQAIHHVDDPDTVLILYGDVPLLKAKTIQTLLHKVSLTSLALLTVNLDDPTGYGRIVRDKDHAVVKIVEQKDANEVELQISEGNTGILACKGSQLKQWLSRLSNNNAQNEYYLTDIIEMAVEDGLSVETTQAGSQDEVLGVNNRSQLAHLERVYQWEQAQALMEKGVTLRDPARVDVRGSFAELGQDIDVDINVIFEGINRIGSNVKIGPNCLIKNASIANDVEIFANSVIEDASVGAGSRIGPFARLRPQTELADHVHIGNFVEIKKSTVATGSKINHLSYIGDSEVGSKVNIGAGTITCNYDGVNKFKTIIGDGAFIGSDTQLVAPVTVGKNATIGAGSTITRDTPENQLTLSRTKQLSVPTWQRPVKAEIVPDNLPHSSRPSESQEK

Annotated regions:
phrase: GVTLRDPARVDVRGSFAELGQDIDVDINVIFEGINRIGSNVKIGPNCLIKNASIANDVEIFANSVIEDASVGAGSRIGPFARLRPQTELADHVHIGNFVEIKKSTVATGSKINHLSYIGDSEVGSKVNIGAGTITCNYDGVNKFKTIIGDGAFIGSDTQLVAPVTVGKNATIGAGSTITRDTPENQLTLSRTK
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain

phrase: IILAAGQGTRMRSSRPKVLHEIANKALLQHVYETSLALENNQIFIIYGHGGETVKQTLSSLNATWIEQKQQLGTGHAVQQAIHHVDDPDTVLILYGDVPLLKAKTIQTLLHKV
type: DOMAIN
name: MobA-like_NTP_Trfase
description: MobA-like NTP transferase

phrase: TIIGDGAFIGSDTQLVAPVTVGKNATIGAGSTIT
type: REPEAT
name: Hexapep
description: Hexapeptide repeat
Protein sequence:
MTTTSESAVLVLAAGAGSRMRSDTPKVLHNIGGRSMLSHALHAVAKVAPDHLVVVLGKDRDRISAAVGDLATQLGQPIEVAVQDQQLGTGHAALCGLSALPGDFGGVVVITSGDIPLLDADTLAELIAAHRGAAAAVTVVTTTVPDATGYGRILRTQDDEVVAIVEETDATPQQRLIREINAGVYAFDIAALRSALDRLSCDNVQQEQYLTDVVAIVRADGGVVHARHVDDAALVAGVNDRVQLSEIGKELNRRVVAAHQRAGVTVIDPATTWIDVAVAVGRDTVIAPGSQLLGDTRVGSGCRIGPDTTLVDVRVGDDASVVRTHASAAVIGDGADVGPFTYLRPGTRLGAGGKLGAFVEVKNSVIGAGTKVPHLTYVGDADIGEHSNIGASSVFVNYDGQTKQRTTVGSYVRTGSDTMFVAPVTVGDGAYTGAGTVLREDVPPGALAVSAGQQRIIEDWVLRNRPDSDSARAAAEAKADPDHS

Annotated regions:
phrase: VLVLAAGAGSRMRSDTPKVLHNIGGRSMLSHALHAVAKVAPDHLVVVLGKDRDRISAAVGDLATQLGQPIEVAVQDQQLGTGHAALCGLSALPGDFGGVVVITSGDIPLLDADTLAELIAAHRGAAAAVTVV
type: DOMAIN
name: MobA-like_NTP_Trfase
description: MobA-like NTP transferase

phrase: GVTVIDPATTWIDVAVAVGRDTVIAPGSQLLGDTRVGSGCRIGPDTTLVDVRVGDDASVVRTHASAAVIGDGADVGPFTYLRPGTRLGAGGKLGAFVEVKNSVIGAGTKVPHLTYVGDADIGEHSNIGASSVFVNYDGQTKQRTTVGSYVRTGSDTMFVAPVTVGDGAYTGAGTVLREDVPPGALAVSAGQ
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain