nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MNMLNKKIYAEMYGPTVGDSVRLADTDLWVKIEKDFTIYGEEVKFGGGKVIRDGMGQGQMNNKECVDLVLTNAIIIDYWGVIKADIGINNGRIVGIGKSGNPDIQPGVTIYIGPGTEVISAEGKIVTAGGIDVHVHFICPQQIEEALSSGMTTLIGGGTGPTTGSNATTCTPGVWFISRMLQAADALPINIGFTGKGSSALPESLIEQIHAGAIGLKVHEDWGATPATIDCCLNVADNFDVQVSIHTDTLNESGFLETTISAIKNRTIHAYHVEGAGGGHSPDIIRICELNNVLPSSTNPTLPYTINTVDEHLDMMMVCHNLNCNLPEDIAFAESRIRRETIAAEDILHDLGALSMISSDSQAMGRIGETILRTWQTAHKMKLQRGSLLGDDQYNDNTRIKRYIAKYTINPAITHGIAHEVGSVEIGKLADLVLWSPVFFGVKPELIVKGGMIVSSVMGDPNASIPTPQPVYYRLMFGSYDLAKCATRMTFISQSSYDVGVVENLRLNSLIGISKRCRNIKKDHMINNNLKPVMEVDPQTYEVRANGELLVCEPVSVVPMSQRYFLF

Annotated regions:
phrase: LNKKIYAEMYGPTVGDSVRLADTDLWVKIEKDFTIYGEEVKFGGGKVIRDGMGQGQMNNKECVDLVLTNAIIIDYWGVIKADIGINNGRIVGIGKSGNPDIQPGVTIYIGPGTEV
type: DOMAIN
name: Urease_alpha_N_dom
description: Urease alpha-subunit, N-terminal domain

phrase: TAGGIDVHVHFIC
type: BINDING_SITE
name: Urease_Ni-bd
description: Urease nickel binding site

phrase: MVCHNLNCNLPEDIAF
type: ACTIVE_SITE
name: Urease_AS
description: Urease active site

phrase: IVTAGGIDVHVHFICPQQIEEALSSGMTTLIGGGTGPTTGSNATTCTPGVWFISRMLQAADALPINIGFTGKGSSALPESLIEQIHAGAIGLKVHEDWGATPATIDCCLNVADNFDVQVSIHTDTLNESGFLETTISAIKNRTIHAYHVEGAGGGHSPDIIRICELNNVLPSSTNPTLPYTINTVDEHLDMMMVCHNLNCNLPEDIAFAESRIRRETIAAEDILHDLGALSMISSDSQAMGRIGETILRTWQTAHKMKLQRGSLLGDDQYNDNTRIKRYIAKYTINPAITHGIAHEVGSVEIGKLADLVLWSPVFFGVKPELIVKGGM
type: DOMAIN
name: Amidohydro-rel
description: Amidohydrolase-related

phrase: GGIDVHVHFICPQQIEEALSSGMTTLIGGGTGPTTGSNATTCTPGVWFISRMLQAADALPINIGFTGKGSSALPESLIEQIHAGAIGLKVHEDWGATPATIDCCLNVADNFDVQVSIHTDTLNESGFLETTISAIKNRTIHAYHVEGAGGGHSPDIIRICELNNVLPSSTNPTLPYTINTVDEHLDMMMVCHNLNCNLPEDIAFAESRIRRETIAAEDILHDLGALSMISSDSQAMGRIGETILRTWQTAHKMKLQRGSLLGDDQYNDNTRIKRYIAKYTINPAITHGIAHEVGSVEIGKLADLVLWSPVFFGVKPELIVKGGMIVSSVMGDPNASIPTPQPVYYRLMFGSYDLAKCATRMTFISQSSYDVGVVENLRLNSLIGISKRCRNIKKDHMINNNLKPVMEVDPQTYEVRANGELLVCEPVSVVPMSQRYFL
type: DOMAIN
name: Urease_asu_c
description: Urease alpha subunit, C-terminal
Protein sequence:
MTILVLGGRGKTASRLAALLDQAKTPFLVGSSSASPSDPYKSSQFNWLKRDTWERPFEQAGKHGLGTISSIYLVGPPVMDIAPPMIEFVDLARAKGVQRFVLLSASTVEKGGHSMGQVHAYLDSLAEVEYVALRPTWFMENLLEDPSREWIKNENQIITATGDGKIPFVSADDIASVAFHCLTEWGSHKTEYVILGPELLSYGQVAEILTTILGKKIIHRSLTETGLAELLVKKAGIPADFAAMLSAMEVDVKNGPQEVLNNSVVEVTGNPPRYFKDVAEHEKHVWA

Annotated regions:
Protein sequence:
MASAGNAAGALGRQAGGGRRRRTGGPHRAAPDRDYLHRPSYCDAAFALEQISKGKATGRKAPLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLLIFGAFAVGLKAANLETNVEELWVEVGGRVSRELNYTRQKIGEEAMFNPQLMIQTPKEEGANVLTTEALLQHLDSALQASRVHVYMYNRQWKLEHLCYKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAKLQSGTAYLLGKPPLRWTNFDPLEFLEELKKINYQVDSWEEMLNKAEVGHGYMDRPCLNPADPDCPATAPNKNSTKPLDVALVLNGGCQGLSRKYMHWQEELIVGGTVKNATGKLVSAHALQTMFQLMTPKQMYEHFRGYDYVSHINWNEDRAAAILEAWQRTYVEVVHQSVAPNSTQKVLPFTTTTLDDILKSFSDVSVIRVASGYLLMLAYACLTMLRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCCFTSPCVSRVIQVEPQAYTEPHSNTRYSPPPPYTSHSFAHETHITMQSTVQLRTEYDPHTHVYYTTAEPRSEISVQPVTVTQDNLSCQSPESTSSTRDLLSQFSDSSLHCLEPPCTKWTLSSFAEKHYAPFLLKPKAKVVVILLFLGLLGVSLYGTTRVRDGLDLTDIVPRETREYDFIAAQFKYFSFYNMYIVTQKADYPNIQHLLYDLHKSFSNVKYVMLEENKQLPQMWLHYFRDWLQGLQDAFDSDWETGRIMPNNYKNGSDDGVLAYKLLVQTGSRDKPIDISQLTKQRLVDADGIINPSAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETRLRIPAAEPIEYAQFPFYLNGLRDTSDFVEAIEKVRVICNNYTSLGLSSYPNGYPFLFWEQYISLRHWLLLSISVVLACTFLVCAVFLLNPWTAGIIVMVLALMTVELFGMMGLIGIKLSAVPVVILIASVGIGVEFTVHVALAFLTAIGDKNHRAMLALEHMFAPVLDGAVSTLLGVLMLAGSEFDFIVRYFFAVLAILTVLGVLNGLVLLPVLLSFFGPCPEVSPANGLNRLPTPSPEPPPSVVRFAVPPGHTNNGSDSSDSEYSSQTTVSGISEELRQYEAQQGAGGPAHQVIVEATENPVFARSTVVHPDSRHQPPLTPRQQPHLDSGSLSPGRQGQQPRRDPPREGLRPPPYRPRRDAFEISTEGHSGPSNRDRSGPRGARSHNPRNPTSTAMGSSVPSYCQPITTVTASASVTVAVHPPPGPGRNPRGGPCPGYESYPETDHGVFEDPHVPFHVRCERRDSKVEVIELQDVECEERPWGSSSN

Annotated regions:
phrase: KSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDLYRREDRRLDIFCCF
type: DOMAIN
name: HMGCR/SNAP/NPC1-like_SSD
description: HMGCR/SNAP/NPC1-like, sterol-sensing domain

phrase: SVIRVASGYLLMLAYACLTMLRWDCSKSQGAVGLAGVLLVALSVAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILS
type: DOMAIN
name: SSD
description: Sterol-sensing domain
Protein sequence:
MQTSDTRALPLLCARSVYKQYSGVNVLKGIDFTLHQGEVHALLGGNGAGKSTLMKIIAGITSADSGTLEIGGNNYARLTPVHAHQLGIYLVPQEPLLFPSLSIKENILFGLAKKQLSMQKMKNLLAALGCQFDLHSLAGSLDVADRQMVEILRGLMRDSRILILDEPTASLTPAETERLFTRLQELLATGVGIVFISHKLPEIRQIADRISVMRDGTIALSGKTSELSTDDIIQAITPAVREKSLSASQKLWLELPGNRPQHAAGTSVLTLENLTGEGFRNVSLTLNAGEILGLAGLVGAGRTELAETLYGLRTLRGGRIMLNDKEINRLSTGERLLRGLVYLPEDRQSSGLNLDASLAWNVCALTHNLRGFWAKTAKDNATLELYRRALNIKYNQPEQAARTLSGGNQQKILIAKCLEASPQVLIVDEPTRGVDVSARNDIYQLLRSIAAQNVAVLLISSDLEEIELMADRVYVMHQGEITHSALTGRDINVETIMRVAFGDSQRQEAAC

Annotated regions:
phrase: VREKSLSASQKLWLELPGNRPQHAAGTSVLTLENLTGEGFRNVSLTLNAGEILGLAGLVGAGRTELAETLYGLRTLRGGRIMLNDKEINRLSTGERLLRGLVYLPEDRQSSGLNLDASLAWNVCALTHNLRGFWAKTAKDNATLELYRRALNIKYNQPEQAARTLSGGNQQKILIAKCLEASPQVLIVDEPTRGVDVSARNDIYQLLRSIAAQNVAVLLISSDLEEIELMADRVYVMHQGEITHSALTGRDINVETIMRVAFG
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: LCARSVYKQYSGVNVLKGIDFTLHQGEVHALLGGNGAGKSTLMKIIAGITSADSGTLEIGGNNYARLTPVHAHQLGIYLVPQEPLLFPSLSIKENILFGLAKKQLSMQKMKNLLAALGCQFDLHSLAGSLDVADRQMVEILRGLMRDSRILILDEPTASLTPAETERLFTRLQELLATGVGIVFISHKLPEIRQIADRISVMRDGTIALSGKTSELSTDDIIQAITPA
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: QGEVHALLGGNGAGKSTLMKIIAGITSADSGTLEIGGNNYARLTPVHAHQLGIYLVPQEPLLFPSLSIKENILFGLAKKQLSMQKMKNLLAALGCQFDLHSLAGSLDVADRQMVEILRGLMRDSRILILDEPTASLTPAETERLFTRLQELLATGVGIVFISHKLPEIRQIADRISVMRDG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: AGEILGLAGLVGAGRTELAETLYGLRTLRGGRIMLNDKEINRLSTGERLLRGLVYLPEDRQSSGLNLDASLAWNVCALTHNLRGFWAKTAKDNATLELYRRALNIKYNQPEQAARTLSGGNQQKILIAKCLEASPQVLIVDEPTRGVDVSARNDIYQLLRSIAAQNVAVLLISSDLEEIELMADRVYVMHQG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LKGIDFTLHQGEVHALLGGNGAGKSTLMKIIAGITSADSGTLEIGGNNYARLTPVHAHQLGIYLVPQEPLLFPSLSIKENILFGLAKKQLSMQKMKNLLAALGCQFDLHSLAGSLDVADRQMVEILRGLMRDSRILILDEPT
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: RNVSLTLNAGEILGLAGLVGAGRTELAETLYGLRTLRGGRIMLNDKEINRLSTGERLLRGLVYLPEDRQSSGLNLDASLAWNVCALTHNLRGFWAKTAKDNATLELYRRALNIKYNQPEQAARTLSGGNQQKILIAKCLEASPQVLIVDEP
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: LSGGNQQKILIAKC
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site
Protein sequence:
MRALLFLALVGAAVAFPVDDDDKIVGGYTCQENSVPYQVSLNSGYHFCGGSLINDQWVVSAAHCYKSRIQVRLGEHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSCAPAGTQCLISGWGNTLSSGVNEPDLLQCLDAPLLPQADCEASYPGKITDNMVCVGFLEGGKDSCQGDSGGPVVCNGELQGIVSWGYGCALPDNPGVYTKVCNYVDWIQDTIAAN

Annotated regions:
phrase: IVGGYTCQENSVPYQVSLNSGYHFCGGSLINDQWVVSAAHCYKSRIQVRLGEHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSCAPAGTQCLISGWGNTLSSGVNEPDLLQCLDAPLLPQADCEASYPGKITDNMVCVGFLEGGKDSCQGDSGGPVVCNGELQGIVSWGYGCALPDNPGVYTKVCNYVDW
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain

phrase: DSCQGDSGGPV
type: ACTIVE_SITE
name: TRYPSIN_SER
description: Serine proteases, trypsin family, serine active site

phrase: IVGGYTCQENSVPYQVSLNSGYHFCGGSLINDQWVVSAAHCYKSRIQVRLGEHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSCAPAGTQCLISGWGNTLSSGVNEPDLLQCLDAPLLPQADCEASYPGKITDNMVCVGFLEGGKDSCQGDSGGPVVCNGELQGIVSWGYGCALPDNPGVYTKVCNYVDWIQDTI
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain

phrase: IVGGYTCQENSVPYQVSLNSGYHFCGGSLINDQWVVSAAHCYKSRIQVRLGEHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSCAPAGTQCLISGWGNTLSSGVNEPDLLQCLDAPLLPQADCEASYPGKITDNMVCVGFLEGGKDSCQGDSGGPVVCNGELQGIVSWGYGCALPDNPGVYTKVCNYVDWIQD
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain

phrase: KIVGGYTCQENSVPYQVSLNSGYHFCGGSLINDQWVVSAAHCYKSRIQVRLGEHNINVLEGNEQFVNAAKIIKHPNFDRKTLNNDIMLIKLSSPVKLNARVATVALPSSCAPAGTQCLISGWGNTLSSGVNEPDLLQCLDAPLLPQADCEASYPGKITDNMVCVGFLEGGKDSCQGDSGGPVVCNGELQGIVSWGYGCALPDNPGVYTKVCNYVDW
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain

phrase: VSAAH
type: ACTIVE_SITE
name: TRYPSIN_HIS
description: Serine proteases, trypsin family, histidine active site
Protein sequence:
MTKVLFITANPNSAEGSFGMAVGEAFIEAYKNEHPQDEVVTIDLFNTTVPAIDADVFAAWGKFAAGEGFEALTEAQQQKVAAMNTNLETFMHADRYVFVTPMWNFSYPPVVKAYLDNLAIAGKTFKYTENGPVGLLEGKKALHIQATGGVYSEGAYAAVDFGRNHLKTVLGFIGVNETEYIAVEGMNANPEKAQEIKEAAIANARELAKRF

Annotated regions:
phrase: TKVLFITANPNSAEGSFGMAVGEAFIEAYKNEHPQDEVVTIDLFNTTVPAIDADVFAAWGKFAAGEGFEALTEAQQQKVAAMNTNLETFMHADRYVFVTPMWNFSYPPVVKAYLDNLAIAGKTFKYTENGPVGLLEGKKALHIQATGGVYSEGAYAAVDFGRNHLKTVLGFIGVNETEYIAVEGMNANPEKAQEIKEAAIANAR
type: DOMAIN
name: Flavodoxin_fold
description: Flavodoxin-like fold
Protein sequence:
MSSINERPQDPSSALEQATQDVANLKSEFHHIMDEMQVADKTLVSSREQYLREDYVLHKLVKQHGSLTKDPKEGSITETVEKEMKRCGDLQQQKCILANTALYLVTKHLSKIKANIESLEEDGLLAPLDDELSDKKAGSVDLGAGIAGLGNGTAGSGSSSGRKRPASSSSANGKGQKRKQQKKERSRSHQRAGTVSRDVSPNAGIGRDPTFDALAYNDDLFKMNQGGEEDDKQLYCFCQRVSYGEMVACDGPNCKYEWFHYSCVNLTEPPKGQWYCPECRLEIANQKLNKKKKKQ

Annotated regions:
phrase: QLYCFCQRVSYGEMVACDGPNCKYEWFHYSCVNLTEPPKGQWYCPECRL
type: DOMAIN
name: Znf_PHD-finger
description: Zinc finger, PHD-finger

phrase: CFCQRVSYGEMVACDGPNCKYEWFHYSCVNLTEPPKGQWYCPE
type: DOMAIN
name: Znf_PHD-finger
description: Zinc finger, PHD-finger

phrase: YCFCQRVSYGEMVACDGPNCKYEWFHYSCVNLTEPPKGQWYCPEC
type: DOMAIN
name: Znf_PHD
description: Zinc finger, PHD-type

phrase: ALEQATQDVANLKSEFHHIMDEMQVADKTLVSSREQYLREDYVLHKLVKQHGSLTKDPKEGSITETVEKEMKRCGDLQQQKCILANTALYLVTKHLSKIKANIES
type: DOMAIN
name: ING_N_histone-binding
description: Inhibitor of growth protein, N-terminal histone-binding

phrase: CFCQRVSYGEMVACDGPNCKYEWFHYSCVNLTEPPKGQWYCPE
type: CONSERVED_SITE
name: Zinc_finger_PHD-type_CS
description: Zinc finger, PHD-type, conserved site

phrase: LEQATQDVANLKSEFHHIMDEMQVADKTLVSSREQYLREDYVLHKLVKQHGSLTKDPKEGSITETVEKEMKRCGDLQQQKCILANTALYLVTKHLSKIKANIE
type: DOMAIN
name: ING_N_histone-binding
description: Inhibitor of growth protein, N-terminal histone-binding
Protein sequence:
MGGKWSKSSLVGWPAIRERMKRAEPAADGVGAVSRDLERHGAITNNNTPANNADCAWLEAQEEEEEVGFPVKPQVPLRPMTYKGALDLSHFLREKGGLEGLVYSQKRQDILDLWIYHTQGFFPDWQNYTPGPGTRFPLTFGWCFKLVPVEPEEVEKANEGENNCLLHPMSQHGMEDPEREVLKWKFDSSLAYHHRARELHPEFYKDC

Annotated regions:
Protein sequence:
MTKHEINTLTTFTWPKGFYADGIHAGLKEEKKDLGWLYSKVPAAAAGVYTTNQFQAAPTKLTKQTVNLAHQLQTVVMNSANANSCTGPQGMVNAKTMQHLAAKKLGLTDQLVGVASTGIIGEPLPMDKITNGISQLSLTKSAAVTEAVLTTDKHPKSISVQFEFNNEPVTVTGFAKGSGMIHPKMATMLGFVTTDAKIDGVALQQLLNQQVDETFNQITVDGDTSTNDMVLVLANGMAQTSPVTADPAGYALFAAAFHQVLSFLAKSIAKDGEGATKLVEADVLHAYNHDEAQMVAKAIVGSNLVKAAIFGEDPN

Annotated regions:
Protein sequence:
MREYRVAIVGATGLVGQEFIKVLEQRDFPMSSVKLLASDRSAGRKLFVRHEEIEVEETVPESFEGIEIALFSAGGDTSRHFAPMAAKAGAVVVDNSSAWRMEKDVPLVVPEVNPQDCKWHKGIIANPNCSTIQMVVALYPLHKVNPIKRIIVDTYQSVSGTGSAAVEELTTQARQVLEGEETTPHVYPHQIAFNVLPEIDVFLDNGYTKEEWKMVEETRKIMHAENIAISATCARVPVFIGHSEAVNVEFSHPMTPDEAREILTRAPGVKVLDDNSVSLYPTAWQAAETDEVYVGRIRQDASNRNGLAMWVVSDNLRKGAALNTVQIAEELIRQDCLSSGG

Annotated regions:
phrase: RVAIVGATGLVGQEFIKVLEQRDFPMSSVKLLASDRSAGRKLFVRHEEIEVEETVPESFEGIEIALFSAGGDTSRHFAPMAAKAGAVVVDNSSAWRMEKDVPLVVPEVNPQDC
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: ISATCARVPVFIGH
type: CONSERVED_SITE
name: Asp-semialdehyde_DH_CS
description: Aspartate-semialdehyde dehydrogenase, conserved site

phrase: LYPLHKVNPIKRIIVDTYQSVSGTGSAAVEELTTQARQVLEGEETTPHVYPHQIAFNVLPEIDVFLDNGYTKEEWKMVEETRKIMHAENIAISATCARVPVFIGHSEAVNVEFSHPMTPDEAREILTRAPGVKVLDDNSVSLYPTAWQAAETDEVYVGRIRQDASNRNGLAMWVVSDNLR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: RVAIVGATGLVGQEFIKVLEQRDFPMSSVKLLASDRSAGRKLFVRHEEIEVEETVPESFEGIEIALFSAGGDTSRHFAPMAAKAGAVVVDNSSAWRMEKDVPLVVPEVNPQDCKW
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MALRSARGDGPTSGRWDGGAEKGDFNAKRKKKVAEIYQALNSEPTDVAALRRMAISEGGLLTDEIRRKVWPKLLNVNTNDPPPISGKNLRQMSKDYQQVLLDVRRSLRRFPPGMPEEQREGLQEELIDIILLILERNPQLHYYQGYHDIVVTFLLVLGERLATSLVEKLSTHHLRDFMDPTMDNTKHILNYLMPIIDQVNPELHDFMQSAEVGTIFALSWLITWFGHVLSDFRHVVRLYDFFLACHPLMPIYFAAVIVLYREQEVLDCDCDMASVHHLLSQIPQDLPYETLISRAGDLFVQFPPSELAREAAAQPQAEKTAASTFKDFELASAQQRPDMVLRQRFRGLLRPDERTKDVLTKPRTNRFVKLAVMGLTVALGAAALAVVKSALEWAPKFQLQLFP

Annotated regions:
phrase: LLTDEIRRKVWPKLLNVNTNDPPPISGKNLRQMSKDYQQVLLDVRRSLRRFPPGMPEEQREGLQEELIDIILLILERNPQLHYYQGYHDIVVTFLLVLGERLATSLVEKLSTHHLRDFMDPTMDNTKHILNYLMPIIDQVNPELHDFMQSAEVGTIFALSWLITWFGHVLSDFRHVVRLYDFFLAC
type: DOMAIN
name: Rab-GAP-TBC_dom
description: Rab-GAP-TBC domain

phrase: DEIRRKVWPKLLNVNTNDPPPISGKNLRQMSKDYQQVLLDVRRSLRRFPPGMPEEQREGLQEELIDIILLILERNPQLHYYQGYHDIVVTFLLVLGERLATSLVEKLSTHHLRDFMDPTMDNTKHILNYLMPIIDQVNPELHDFMQSAEVGTIFALSWLITWFGHVLSDFRHVVRLYDFFLACHPLMPIYFAAVIVLYREQE
type: DOMAIN
name: Rab-GAP-TBC_dom
description: Rab-GAP-TBC domain

phrase: EGGLLTDEIRRKVWPKLLNVNTNDPPPISGKNLRQMSKDYQQVLLDVRRSLRRFPPGMPEEQREGLQEELIDIILLILERNPQLHYYQGYHDIVVTFLLVLGERLATSLVEKLSTHHLRDFMDPTMDNTKHILNYLMPIIDQVNPELHDFMQSAEVGTIFALSWLITWFGHVLSDFRHVVRLYDFFLACHPLMPIYFAAVIVLYREQEVLDC
type: DOMAIN
name: Rab-GAP-TBC_dom
description: Rab-GAP-TBC domain
Protein sequence:
MSYDPKKIDLFPTLPGVYLMKNEEGEVLYVGKAKNLRQRVKQYFVPGRDGRLMIPYLVAKINYIETIVVTSEKEALLLENNLIKQHKPRYNALLKDDKSYIALKISQNDAWATVRLVRYKGTPEPDGLYFGPYTSAQAARQTLDLLNRLFPLRQCSDQEFARRTRPCLLYQMKRCVGPCTQKCTKGEYQQHLDRTIKFLRGQNKDVLKDLYEEMRLLSEQLEFEKANHLLRTIRYIEKTIESQYVDRPLGHDADAIGLFRYGEHVVVVLMIFRGGKLVGSRHFEFDNIIEEDHELLTSFLLQHYEGATEIPSEILLPSKISDEHPVEEILSARREQKVNLQIPQRGEKKALIEIAQKNAEALFKTQKDEATLREKTLLEMQELLFLTNYPTRIECFDNSNIAGSEPVSSMVAFTDGLKDSKRYRTYRLKIGSKPDDYAAMYEVLTRRYKRAKEENDMPDLVVVDGGKGQLNIAIKVFEELNITGVDLLGLAKEAGRHDKGMTAEQVFTCYQKEPILLKANSPILFLLQKIRDEAHRVAISFHRKRRSKKTLKSALDDIPGIGPAKRKTLLTHFGSLKKIELAADAELREVKGISAANIEAIRTFFQGRKE

Annotated regions:
phrase: FPTLPGVYLMKNEEGEVLYVGKAKNLRQRVKQYFVPGRDGRLMIPYLVAKINYIETIVVTSEKEALLLENNLIKQHKPRY
type: DOMAIN
name: GIY-YIG_UvrC_Cho
description: UvrC/Cho-like, GIY-YIG domain

phrase: VVLMIFRGGKLVGSRHFEFDNIIEEDHELLTSFLLQHYEGATEIPSEILLPSKISDEHPVEEILSARREQKVNLQIPQRGEKKALIEIAQKNAEALFKTQKDEATLREKTLLEMQELLFLTNYPTRIECFDNSNIAGSEPVSSMVAFTDGLKDSKRYRTYRLKIGSKPDDYAAMYEVLTRRYKRAKEENDMPDLVVVDGGKGQLNIAIKV
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: GVYLMKNEEGEVLYVGKAKNLRQRVKQYFVPGRDGRLMIPYLVAKINYIETIVVTSEKEALLLENNLIKQHKPRY
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: QELLFLTNYPTRIECFDNSNIAGSEPVSSMVAFTDGLKDSKRYRTYRLKIGSKPDDYAAMYEVLTRRYKRAKEENDMPDLVVVDGGKGQLNIAIKVFEELNITGVDLLGLAKEAGRHDKGMTAEQVFTCYQKEPILLKANSPILFLLQKIRDEAHRVA
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: LPGVYLMKNEEGEVLYVGKAKNLRQRVKQYFVPGRDGRLMIPYLVAKINYIETIVVTSEKEALLLENNLIKQHKPRYNALLK
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: TLPGVYLMKNEEGEVLYVGKAKNLRQRVKQYFVPGRDGRLMIPYLVAKINYIETIVVTSEKEALLLENNLIKQHKPRYN
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease
Protein sequence:
MTAEQLPPELQRVHMVGIGGAGMAGIARILLDRGGLVSGSDAKESRGVHALRARGALIRIGHDASALDLLPGGVTSVITTHAAIPKTNPELVEARRRGVPVMLRPVVLAKLMDGRITVMVTGTHGKTTTTSMAIVALQHCGRDPSFAVGGELGEAGTNAHHGSGDYFVAEADESDGSLLEYTPHVAVVTNIEADHLDFYGSTEAYVGVFDAFVERLAPGGALVVCADDPGSAALAERSAELGIRVLRYGSAGHAGAALAATLVSWEQRGTGAVAQIQLAGEADPRSMRLSVPGRHMALNVLGALLAAIEVGAPVGEVLDGLAGFEGVRRRFELVGTAESVRVFDDYAHHPTEVRATLEAVRSVVRQSGSGRLLVVFQPHLYSRTKAFAAEFGSALDAADEVFVLDVYAAREQPLTGISGASVAEHVTVPVRYLRDFSAVAEVVAAAAGPGDVVVTMGAGDVTLLGPEIVAALRMRADRSEPGRPGVLQ

Annotated regions:
phrase: VHMVGIGGAGMAGIARILLDRGGLVSGSDAKESRGVHALRARGALIRIGHDASALDLLPGGVTSVITTHAAIPKTNPELVEARRRGVPVMLRPVVLAKLMD
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: VTGTHGKTTTTSMAIVALQHCGRDPSFAVGGELGEAGTNAHHGSGDYFVAEADESDGSLLEYTPHVAVVTNIEADHLDFYGSTEAYVGVFDAFVERLAPGGALVVCADDPGSAALAERSAELGIRVLRYGSAGHAGAALAATLVSWEQRGTGAVAQIQLAGEADPRSMRLSVPGRHMALNVLGALLA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: RRFELVGTAESVRVFDDYAHHPTEVRATLEAVRSVVRQSGSGRLLVVFQPHLYSRTKAFAAEFGSALDAADEVFVLDVYAAREQPLTGISGASVAEHVTVPVRYLRDFSAVAEVVAAAAGPGDVVVTMGA
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MVKNKNNMAIWGSRIKKDASTLFQKVGNSIDIDKKLFQEDILGSIAHVEMLFRQKIISFKIKNKIIFGLNKIEKEILKNKFEYNKKYEDIHMNIEKRLFQIIGEEAGYVHTARSRNDQVITDFKMWTTSATKEINKNLDNIIKTILKISEKNIETIMPGFTHLKNAQAVSFAHYLMSYVEMFNRDKKRFTYNLESLSENPLGVAALTGTSFNIDRNFTSKKLGFKRPTNNSIDTVADRDFVLDFLYSASVCSMHISRIAEELIIWNSDGFNLITLSDKVVTGSSIMPQKKNPDLLEYLRGKTGTVYGNLFSMLTILKGLPISYFKDLQDDKEILFKSNEILNNSIAILNEVLKNLKPNKQQMLDLANSGYITATDLADYLVKNHSMPFRKAYQTTASIVNYAEKKKKKLNELNIDELKKIEPRLTIEVLKIFNVKNSVNSKKSYGGTSFDNIKKMIMKYKKT

Annotated regions:
phrase: RIKKDASTLFQKVGNSIDIDKKLFQEDILGSIAHVEMLFRQKIISFKIKNKIIFGLNKIEKEILKNKFEYNKKYEDIHMNIEKRLFQIIGEEAGYVHTARSRNDQVITDFKMWTTSATKEINKNLDNIIKTILKISEKNIETIMPGFTHLKNAQAVSFAHYLMSYVEMFNRDKKRFTYNLESLSENPLGVAALTGTSFNIDRNFTSKKLGFKRPTNNSIDTVADRDFVLDFLYSASVCSMHISRIAEELIIWNSDGFNLITLSDKVVTGSSIMPQKKNPDLLEYLRGKTGTVY
type: DOMAIN
name: Fumarate_lyase_N
description: Fumarate lyase, N-terminal

phrase: GSSIMPQKK
type: CONSERVED_SITE
name: Fumarate_lyase_CS
description: Fumarate lyase, conserved site

phrase: YITATDLADYLVKNHSMPFRKAYQTTASIVNYAEKKKKKLNELNIDELKKIEPRLTIEVLKIFNVKNSV
type: DOMAIN
name: Arg_succ_lyase_C
description: Argininosuccinate lyase, C-terminal
Protein sequence:
MKHYSIQPANLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLGGNQLEVRFPEHPHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCHRLLLDEGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTSAGFVRRGLQDAGFTMQKRKGFGRKREMLCGVMEQTLPLPCSAPWFNRTGSSKREAAIIGGGIACALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQLPVKFDHDWCGVTQLGWDEKSQHKITQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNLSRKDDCWLLNFAGDQQATHSVVVLANGHQISRFSQTSTLPVYSVAGQVSHIPTTPELAELKQVLCYDGYLTPQNPANQHHCIGASYHRGSEDTAYSEDDQQQNRQRLIDCFPQAQWAKEVDVSDKEARCGVRCATRDHLPMVGNVPDYEATLVEYASLAEQKDEAVSAPVFDDLFMFAALGSRGLCSAPLCAEILAAQMSDEPIPMDASTLAALNPNRLWVRKLLKGKAVKAG

Annotated regions:
phrase: AAIIGGGIACALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQLPVKFDHDWCGVTQLGWDEKSQHKITQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNLSRKDDCWLLNFAGDQQATHSVVVLANGHQISRFSQTSTLPVYSVAGQVSHIPTTPELAELKQVLCYDGYLTPQNPANQHHCIGASYHRGSEDTAYSEDDQQQNRQRLIDCFPQAQWAKEVDVSDKEARCGVRCATRDHLPMVGNVPDYEATLVEYASLAEQKDEAVSAPVFDDLFMFAALGSRGLCSAPLCAEILAAQMSDEPIPMDASTLAALNPNRLWVRKLLK
type: DOMAIN
name: tRNA_S-uridine_synth_MnmC_C
description: tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC, C-terminal

phrase: PELAPWAEQLQAQWPMPLPGCHRLLLDEGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTSAGFVRRGLQDAGFTMQKRKGFGRKREMLCGV
type: DOMAIN
name: MnmC-like_methylTransf
description: MnmC-like methyltransferase

phrase: PVSRDFDDVYFSNDNGLEETRYVFLGGNQLEVRFPEHPHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCHRLLLDEGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTSAGFVRRGLQDAGFTMQKRKGFGRKREMLCGV
type: DOMAIN
name: tRNA_MNMC2
description: tRNA mnm(5)s(2)U biosynthesis bifunctional protein MnmC, N-terminal

phrase: AAIIGGGIACALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQLPVKFDHDWCGVTQLGWDEKSQHKITQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNLSRKDDCWLLNFAGDQQATHSVVVLANGHQISRFSQTSTLPVYSVAGQVSHIPTTPELAELKQVLCYDGYLTPQNPANQHHCIGASYHRGSEDTAYSEDDQQQNRQRLIDCFPQAQWAKEVDVSDKEARCGVRCATRDHLPMVGNVPDYEATLVEYASLAEQKDEAVSAPVFDDLFMFAALGSRGLCSAPLCAEILA
type: DOMAIN
name: FAD-dep_OxRdtase
description: FAD dependent oxidoreductase
Protein sequence:
MALWGGRFSQKADQRFKQFNDSLRFDYRLAEQDITGSVAWSKALITVGVLTVEEQQRLELALNELLNEVQANPQAILQSDAEDIHSWVEGQLISKVGGLGKKLHTGRSRNDQVATDLKLWCKEYISHLHQAIVELQQVLVITAEKNQDTVMPGYTHLQRAQPITFAHWCLAYVEMLVRDENRLQDTLKRLNTSPLGCGALAGTAYDIDREQLASWLGFASATRNSLDSVSDRDHVLELLSNASISMIHLSRFAEDLIFFNSGEAGFIELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQGALTGMMMTLKGLPLAYNKDMQEDKEGLFDALDIWLDCLHMAALVLDGIQVRRSRCAEAAKQGYANATELADYLVAKGVPFREAHHIVGEIVMMALTQGKALEALPLTELQKFSSAIIEDVYDILSLQSCLDKRLAKGGVSPKQVMKAIVEAKQRLKLS

Annotated regions:
phrase: GRFSQKADQRFKQFNDSLRFDYRLAEQDITGSVAWSKALITVGVLTVEEQQRLELALNELLNEVQANPQAILQSDAEDIHSWVEGQLISKVGGLGKKLHTGRSRNDQVATDLKLWCKEYISHLHQAIVELQQVLVITAEKNQDTVMPGYTHLQRAQPITFAHWCLAYVEMLVRDENRLQDTLKRLNTSPLGCGALAGTAYDIDREQLASWLGFASATRNSLDSVSDRDHVLELLSNASISMIHLSRFAEDLIFFNSGEAGFIELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQ
type: DOMAIN
name: Fumarate_lyase_N
description: Fumarate lyase, N-terminal

phrase: YANATELADYLVAKGVPFREAHHIVGEIVMMALTQGKALEALPLTELQKFSSAIIEDVYDILSLQSC
type: DOMAIN
name: Arg_succ_lyase_C
description: Argininosuccinate lyase, C-terminal

phrase: GSSLMPQKK
type: CONSERVED_SITE
name: Fumarate_lyase_CS
description: Fumarate lyase, conserved site
Protein sequence:
MALLLNSTMTVAMKQNPATAVSFMQTTCLGSSFSPPRHLQVSCVATNPSKTFRPIKEVSNQVTHTITQEKLEIFKSMENWAQENLLSYLKPVETSWQPQDFLPETKDEDRFYEQVKELRDRTKEIPDDYFVVLVGDMITEEALPTYQTVMNTLDGAKDETGVSLTPWAVWLRAWTAEENRHGDLLNKYLYLSGRVDTRHVEKTIQYLIGSGMDTKYENNPYNGYIYTSFQERATFISHANTAKLATTYGDTTLAKICGTIAADEKRHEMAYTRIVEKLFEIDPDGTVQALASMMRKRITMPAQLMHDGRDDNLFDHYAAVAQRIGVYTATDYAGILEFLLRRWEVEKLGMGLSGEGRRAQDYLCTLPQRIRRLEERADDRVKRASKSKPSVSFSWIYGREVEL

Annotated regions:
Protein sequence:
MRAKGIKRNWQDSWTWGILLFGMLMICSAKDNLWVTVYYGVPVWKEATTTLFCASDAKAYHTEAHNIWATHACVPTDPNPQEIVLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLHCTNITRNDSRVEDRGEIKNCSFNVTTSIRNKQQREYALFYKTDVMSIANDTTSYTLINCNTSVITQTCPKTSFEPIPIHYCAPAGFAILKCNDKKFNGTGPCKNVSVVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSENFTDNAKVIIVQLNEIVVVNCTRPNNNTRKSIPIGPGRAFYATGDIIGDIRQAHCNISRDKWNTTLGHVVTKLKEQFGNKTIVFKHSSGGDPEIVMHSFNCGGEFFYCNTLQLFNSTWNGTESGITNLTNPDETISLPCRIKQIVNRWQEVGKAMYAPPISGQINCSSNITGLLLVRDGGVYNSTSDSETFRPEGGNMKDNWRSELYKYKVVKIEPLGIAPTKARRRVVQREKRAVGTLGAMFLGFLGAAGSTMGAASLTLTVQARLLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNTSWSNKTLNKIWDNMTWMQWEREIENYTDEIYRLIEQSQNQQEKNEQELLALDEWANLWNWFDITNWLWYIRIFIMVVGGLIGLRIIFAVLSVVNRVRQGYSPLSFQTRLPARREPDRPEGTGEEGGETDRDRSGGLVTSLLAIIWIDLRSLCLFSYHRLRDLLLT

Annotated regions:
phrase: MGAASLTLTVQARLLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNTSWSNKTLNKIWDNMTWMQWEREIENYTDEIYRLIEQSQNQQEKNEQELLALDEWANLWNWFDITNWLWYIRIFIMVVGGLIGLRIIFAVLSVVNRVRQGYSPLSFQ
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: GEIKNCSFNVTTSIRNKQQREYALFYKTDVMSIANDTTSYTLINCNTSVITQTCPKTSFEPIPIHYCAPAGFAILKCNDKKFNGTGPCKNVSVVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSENFTDNAKVIIVQLNEIVVVNCTRPNNNTRKSIPIGPGRAFYATGDIIGDIRQAHCNISRDKWNTTLGHVVTKLKEQFGNKTIVFKHSSGGDPEIVMHSFNCGGEFFYCNTLQLFNSTWNGTESGITNLTNPDETISLPCRIKQIVNRWQEVGKAMYAPPISGQINCSSNITGLLLVRDGGVYNSTSDSETFRPEGGNMKDNWRSELYKYKVVKIEPLGIAPTKARRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: LWVTVYYGVPVWKEATTTLFCASDAKAYHTEAHNIWATHACVPTDPNPQEIVLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLHCTNITRN
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: VQARLLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNTSWSNKTLNKIWDNMTWMQWEREIENYTDEIYRLIEQSQNQQEKNEQELLAL
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like