nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MRVNASAGSGRARLSETRGGVTVVVLAAGKGVRMNSRIPKVLHPVAGRPMLLWSMAAARALDPERTLVVTNPSQDGIQAALNGEGQTVSQREQLGTGHALSQVSAEHRTTGPVIVLYADAPLLRGETLRRLLAEHREAGAAVTLLTAVLDDPRGYGRVLRARNGVFRRIVEEKDASDADRQIHEINSGVYCFSGRDLWPALLKLENKNRAHEYYLTDVVGLIKGKVNTVAVLDPKEILGINDRRQLAQAEHIMRERILDDLMSRGVTITDPRSTFVDADVSIGQDSVIHPFSTITGHSVIGEDCVIGPMTQVRDSTVGDGCRIERSHLEQVKIASNVTIGPFSRLRPGTELAEGVHVGTHTEIKNSKIGAGSAVPHFSYLGDAVVGANVNIGAGSITANWDGFEKNVTEIGDSVYVSCDTIFVAPVRVGSDATTAADTVVTKDVPAGSLAIGRADMKIVEGYTARRRARHSAKADKPKAAKK

Annotated regions:
phrase: VVVLAAGKGVRMNSRIPKVLHPVAGRPMLLWSMAAARALDPERTLVVTNPSQDGIQAALNGEGQTVSQREQLGTGHALSQVSAEHRTTGPVIVLYADAPLLRGETLRRLLAEHREAGAAVTLLTAVLDDPRGYGRVLRARNGVFRRIVEEKDASDADRQIHEINSGVYCFSGRDLWPALLKLENKN
type: DOMAIN
name: MobA-like_NTP_Trfase
description: MobA-like NTP transferase

phrase: DVSIGQDSVIHPFSTITGHSVIGEDCVIGPMTQ
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: GVTITDPRSTFVDADVSIGQDSVIHPFSTITGHSVIGEDCVIGPMTQVRDSTVGDGCRIERSHLEQVKIASNVTIGPFSRLRPGTELAEGVHVGTHTEIKNSKIGAGSAVPHFSYLGDAVVGANVNIGAGSITANWDGFEKNVTEIGDSVYVSCDTIFVAPVRVGSDATTAADTVVTKDVPAGSLAIGR
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain
Protein sequence:
MTDGDTSPAHTRPDAFGRVRHLHFVGIGGAGMGGIAEVLHNLGFTVTGSDLRENAITRRLAGLGVQVVFGHEADHVQGADAVVVSSAVQADNPEVQAAREYRIPVVRRAEMLAELMRFRYGIAVAGTHGKTTTTSLVASVLAEGGLDPTYVIGGRLNSSASHARLGSGRYLVAEADESDASFLHLKPMMAVVTNIDADHLETYGGDFDQLRHTFDEFLHHLPFYGLAVLCHDDPVLRDLGPEIARQVRSYGFAEDADLRAVDIEQSGRRTRFTVVDGEATFPVEVNLPGRHNVQNALAAIAVARELHVDVAAIQRALQRFQGIGRRFQDHGTLRFGDARVTLVDDYGHHPREIAATLRAVRDGWPGRRVLVVFQPHRYSRTRDLFEDFARVLSEADALLVTEVYAAGEPPVAGATGRGLCAAIRARGQVNPVFVETLEELQQVLPGVARDGDLVLTLGAGSIGGAAAELARRHGVEDGG

Annotated regions:
phrase: HLHFVGIGGAGMGGIAEVLHNLGFTVTGSDLRENAITRRLAGLGVQVVFGHEADHVQGADAVVVSSAVQADNPEVQAAREYRIPVVRRAEMLAELMRFR
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: VAGTHGKTTTTSLVASVLAEGGLDPTYVIGGRLNSSASHARLGSGRYLVAEADESDASFLHLKPMMAVVTNIDADHLETYGGDFDQLRHTFDEFLHHLPFYGLAVLCHDDPVLRDLGPEIARQVRSYGFAEDADLRAVDIEQSGRRTRFTVVDGEATFPVEVNLPGRHNVQNALAAIAV
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: ARVTLVDDYGHHPREIAATLRAVRDGWPGRRVLVVFQPHRYSRTRDLFEDFARVLSEADALLVTEVYAAGEPPVAGATGRGLCAAIRARGQVNPVFVETLEELQQVLPGVARDGDLVLTLGA
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MESLTLQPIARVDGAINLPGSKSVSNRALLLAALACGKTVLTNLLDSDDVRHMLNALSALGINYTLSADRTRCDITGNGGPLRASGTLELFLGNAGTAMRPLAAALCLGQNEIVLTGEPRMKERPIGHLVDSLRQGGANIDYLEQENYPPLRLRGGFIGGDIEVDGSVSSQFLTALLMTAPLAPEDTIIRVKGELVSKPYIDITLNLMKTFGVEIANHHYQQFVVKGGQQYHSPGRYLVEGDASSASYFLAAGAIKGGTVKVTGIGRKSMQGDIRFADVLEKMGATITWGDDFIACTRGELHAIDMDMNHIPDAAMTIATTALFAKGTTTLRNIYNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPAKLQHADIGTYNDHRMAMCFSLVALSDTPVTILDPKCTAKTFPDYFEQLARMSTPA

Annotated regions:
phrase: RVKETDRLFAMATELRKV
type: CONSERVED_SITE
name: EPSP_synthase_CS
description: 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site

phrase: LFLGNAGTAMRPLA
type: CONSERVED_SITE
name: EPSP_synthase_CS
description: 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site

phrase: QPIARVDGAINLPGSKSVSNRALLLAALACGKTVLTNLLDSDDVRHMLNALSALGINYTLSADRTRCDITGNGGPLRASGTLELFLGNAGTAMRPLAAALCLGQNEIVLTGEPRMKERPIGHLVDSLRQGGANIDYLEQENYPPLRLRGGFIGGDIEVDGSVSSQFLTALLMTAPLAPEDTIIRVKGELVSKPYIDITLNLMKTFGVEIANHHYQQFVVKGGQQYHSPGRYLVEGDASSASYFLAAGAIKGGTVKVTGIGRKSMQGDIRFADVLEKMGATITWGDDFIACTRGELHAIDMDMNHIPDAAMTIATTALFAKGTTTLRNIYNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPAKLQHADIGTYNDHRMAMCFSLVALSDTPVTILDPKCTAKTFPDYFEQ
type: DOMAIN
name: Enolpyruvate_Tfrase_dom
description: Enolpyruvate transferase domain
Protein sequence:
MKTAHEIRPGNVIMLDGSPWVVQKTETTRSGRNAAIVKLKLKHVLLDSGTEQTFKGEDKMDVIVLERLDCTYSYFADPMYVFMDADYNQYDVEADNLGDAAAYIIDGMEETCQVTFYEGKAISVELPTHIVREVIYTEPSARGDTSGKVMKPATITGGGTVTVADFVKVGDKIEIDTRTGEFKKRA

Annotated regions:
phrase: IVREVIYTEPSARGDTSGKVMKPATITGGGTVTVADFVKVGDKIEIDTRTGEFKK
type: DOMAIN
name: Elong-fact-P_C
description: Elongation factor P, C-terminal

phrase: IVREVIYTEPSARGDTSGKVMKPATITGGGTVTVADFVKVGDKIEIDTRTGEFKK
type: DOMAIN
name: Elong-fact-P_C
description: Elongation factor P, C-terminal

phrase: DCTYSYFADPMYVFMDADYNQYDVEADNLGDAAAYIIDGMEETCQVTFYEGKA
type: DOMAIN
name: Transl_elong_P/YeiP_cen
description: Translation elongation factor P/YeiP, central

phrase: VREVIYTEPSARGDTSGKVMKPATITGGGTVTVADFVKVGDKIEIDTRTGEFKK
type: DOMAIN
name: Elong-fact-P_C
description: Elongation factor P, C-terminal

phrase: RLDCTYSYFADPMYVFMDADYNQYDVEADNLGDAAAYIIDGMEETCQVTFYEGKA
type: DOMAIN
name: Transl_elong_P/YeiP_cen
description: Translation elongation factor P/YeiP, central

phrase: TAHEIRPGNVIMLDGSPWVVQKTETTRSGRNAAIVKLKLKHVLLDSGTEQTFKGEDK
type: DOMAIN
name: Transl_elong_KOW-like
description: Translation elongation factor, KOW-like

phrase: ERLDCTYSYFADPMYVFMDADYNQYDVEADNLGDAAAYIIDGMEETCQVTFYEGKAISVEL
type: DOMAIN
name: Transl_elong_P/YeiP_cen
description: Translation elongation factor P/YeiP, central
Protein sequence:
MTALLGPDQLEADLRAIGARLYHDQHPFHALLHHGKLDRGQVQAWALNRFEYQRCIPLKDAAILARMEDPALRRIWRQRILDHDGNSASDGGIARWLHLTDALGLDRTLVESGRALLPGTRFAVQAYLHFVREKSLLEAIASSLTELFAPNIIGQRVAGMLKHYDFVSSEALAYFEHRLTEAPRDSDFALDYVKQHADTVEKQALVKAALHFKCSVLWAQLDALHVAYVAPGIVWPDAFVPDRDASRVAA

Annotated regions:
phrase: ADLRAIGARLYHDQHPFHALLHHGKLDRGQVQAWALNRFEYQRCIPLKDAAILARMEDPALRRIWRQRILDHDGNSASDGGIARWLHLTDALGLDRTLVESGRALLPGTRFAVQAYLHFVREKSLLEAIASSLTELFAPNIIGQRVAGMLKHYDFVSSEALAYFEHRLTEAPRDSDFALDYVKQHADTVEKQALVKAALHFKCSVLWAQL
type: DOMAIN
name: Thiaminase-2/PQQC
description: Thiaminase-2/PQQC
Protein sequence:
MKVGFVGWRGMVGSVLMQRMKEENDFAHIPEAFFFTTSNVGGAAPDFGQAAKTLLDANDVAELAKMDIIVTCQGGDYTKSVFQPLRDSGWNGYWVDAASSLRMKDDAIIVLDPVNRNVIDNGLKNGVKNYIGGNCTVSLMLMALGGLFQNDLVEWATSMTYQAASGAGAKNMRELISGMGAIHAKVADELADPSSAILDIDRKVSDFLRSEDYPKANFGVPLAGSLIPWIDVDLGNGQSKEEWKGGVETNKILGRSDNPTVIDGLCVRIGSMRCHSQALTLKLKKDLPVSEIEAILAGANDWVKVIPNEKEASIHELTPAKVTGTLSVPVGRIRKLEMGGEYISAFTVGDQLLWGAAEPLRRVLRIVLGSL

Annotated regions:
phrase: IDGLCVRIGSMRCH
type: CONSERVED_SITE
name: Asp-semialdehyde_DH_CS
description: Aspartate-semialdehyde dehydrogenase, conserved site

phrase: LGGLFQNDLVEWATSMTYQAASGAGAKNMRELISGMGAIHAKVADELADPSSAILDIDRKVSDFLRSEDYPKANFGVPLAGSLIPWIDVDLGNGQSKEEWKGGVETNKILGRSDNPTVIDGLCVRIGSMRCHSQALTLKLKKDLPVSEIEAILAGANDWVKVIPNEKEASIHELTPAKVTGTLSVPVGRIRKLEMGGEYISAFTVGDQLL
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: KVGFVGWRGMVGSVLMQRMKEENDFAHIPEAFFFTTSNVGGAAPDFGQAAKTLLDANDVAELAKMDIIVTCQGGDYTKSVFQPLRDSGWNGYWVDAASSLRMKDDAIIVLDPVNRNVIDN
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: KVGFVGWRGMVGSVLMQRMKEENDFAHIPEAFFFTTSNVGGAAPDFGQAAKTLLDANDVAELAKMDIIVTCQGGDYTKSVFQPLRDSGWNGYWVDAASSLRMKDDAIIVLDPVNRNVID
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MENRWQVMIVWQVDRXRIRTWHSLVKYHMHISKKTRAWHYRHHYESRHPKVSSEVRIPVGEARLIVRTYWGLNTGERDWHLGHGVSIEWRQRRYSTQVDPDLADQLIHLHYFECFSDSAIRKAILGEIVSPRCEYQAGHKQVGSLQYLALKALVKPTRSKPPLPSVKKLTEDRWNKPQKTKGHRESPTTNGH

Annotated regions:
Protein sequence:
MSADGRSGRLRFTKMHGAGNDFVVLDLRDGTPPPDAALAAQLADRHFGIGCDQILTIEAPRSEGAAAAYGIWNSDGSAARQCGNGARCVAAWLVRDGTAQGERFIIDSPATAHAVERLDGDRYAVAMGVPQFEPTQIPLAGFAHARDEYALPVHGETVRFGAVSMGNPHAVVEVGRVDAAPVERVGALLQQNAAFPDSVNVGFAQVVDPVHVRLRVFERGVGETLACGSGACAAAAVLMQRGRVERDVQVSLPGGELRIRWPGDQEQVVMSGPAVFVFDGEWNR

Annotated regions:
phrase: NSDGSAARQCGNGA
type: ACTIVE_SITE
name: DAP_epimerase_AS
description: Diaminopimelate epimerase, active site
Protein sequence:
MRSVRSSSRTPKPVKRFVFDEDEDLEEIDLDEVDNADFEREDDEEEVLSEPSESPYTSTPKSSKRVNKTRGTKDFFKKDESLQLFRFVLNECRSQKPGRVGRVAKKRVGVNSMKYWERYKREIQGYRLPKQYRYHYSFYSKCFYKVLGLTPEEKVDLYYACEMPVVTDAEKQWLVEQFHVEFDEFGVIIGSDVCTHWDEEHSDSEDDSGKKEEKAREVSRYTEYHDDMMWKFIVDKISEGAQPIIDKHPIWDEFVKLNEENDVISKKSGRNHYDRFRRILVPNLHFMPYDDFTKAVLYERLEYPIPEEYRKILFTTTGADINESGFIEYLPPSTIHQISPIVPIPCHKSNPKFSQLKEPKDLILWSERKKFTPREDSQIWEFVRRKCVDSAGIFVKNDVLRGRGTLFFKDFRNTERKYESITQRFVVLRKLIMDTDYSLKQKLEIYYAISQPVDEDALDAFKSIACLVLNPDGTIRFAISKSFLIGRISDEPAKLEAENYSYVYDLFIFNETFGTAENPEPLCSVSQNRAEKFMLVSQLVFRFISRFEALEDRRIAWITPNAQVAPKEPVPAPSKKKSAFEAYQSSPQTFDTIQRFSTKRPFFCGDNFQIPPKKPFLAEEDVKLEPMEYENSEQIVENAEIKLEPAEELLDAETVTVEEFLMNSYSTAAPSTSTAPAPPKAPVTAPPAPQKSAQLLGKIDFAIGKMRENFDRFLQFAQQNSADLTVVQRYRYDAQMQQMTEKFTKDVSKVLSGDSIKR

Annotated regions:
phrase: EDSQIWEFVRRKCVDSAGIFVKNDVLRGRGTLFFKDFRNTERKYESITQRFVVLRKLIMDTDYSLKQKLEIYYAISQPVDEDALDAFKSIACLVLNPDGTIRFAISKSFLIGRISDEPAKLE
type: DOMAIN
name: SPK_dom
description: SPK domain
Protein sequence:
MLEGCILAVSSQSKSAKAITNNSVPGAPNRISFAKLREPLEVPGLLDVQTESFDWLIGADSWRQRATARGDVNPTGGLEEVLTELSPIEDFSGSMSLSFSDPRFDEVKAPVDECKDKDMTYAAPLFVTAEFINNNTGEIKSQTVFMGDFPMMTEKGTFIINGTERVVVSQLVRSPGVYFDESIDKSTEKTLHSVKVIPGRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTNEQITERFGFSEIMMSTLEKDNTAGTDEALLDIYRKLRPGEPPTKESAQTLLENLFFKEKRYDLARVGRYKVNKKLGLNTDKPITSSTLTEEDVVATIEYLVRLHQGDTVMTVPGGVEVPVEVDDIDHFGNRRLRTVGELIQNQIRVGLSRMERVVRERMTTQDVEAITPQTLINIRPVVAAIKEFFGTSQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGLEVRDVHSSHYGRMCPIETPEGPNIGLIGSLSVYARVNPFGFIETPYRKVENGVVTDQIDYLTADEEDRHVVAQANSPLDDEGHFTEDRVLVRRKGGEVEFVSATEVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMQRQAVPLVRSEAPLVGTGMELRAAIDAGDVVVSEKAGVVEEVSADYITVMADDGTRHTYRMRKFARSNHGTCANQRPIVDAGQRVEAGQVVADGPCTQNGEMALGKNLLVAIMPWEGHNYEDAIILSNRLVEEDVLTSIHIEEHEIDARDTKLGAEEITRDIPNVSDEVLADLDERGIVRIGAEVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGKVIGIRVFSREDDDELPAGVNELVRVYVAQKRKISDGDKLAGRHGNKGVIGKILPVEDMPFLPDGTPVDIILNTHGVPRRMNIGQILETHLGWVAKAGWNINVAGADGVPDWAEKLPEELYSAPSDSIVATPVFDGARENELSGLLASTLPNRDGDVMVNEDGKAELFDGRSGEPFPYPVTVGYMYILKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAAYTLQELLTIKSDDTVGRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLSSDGAAIEMRDGDDEDLERAAANLGINLSRNESASVEDLA

Annotated regions:
phrase: RSPGVYFDESIDKSTEKTLHSVKVIPGRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTNEQITERFGFSEIMMSTLEKDNTAGTDEALLDIYRKLRPGEPPTKESAQTLLENLFFKEKRYDLARVGRYKVNKKLGLNTDKPITSSTLTEEDVVATIEYLVRLHQGDTVMTVPGGVEVPVEVDDIDHFGNRRL
type: DOMAIN
name: RNA_pol_Rpb2_2
description: RNA polymerase Rpb2, domain 2

phrase: GGQRFGEMECWAMQAYGAAYTLQELLTIKSDDTVGRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEV
type: DOMAIN
name: RNA_pol_Rpb2_7
description: RNA polymerase Rpb2, domain 7

phrase: GDKLAGRHGNKG
type: CONSERVED_SITE
name: RNA_pol_bsu_CS
description: RNA polymerase, beta subunit, conserved site

phrase: SDPRFDEVKAPVDECKDKDMTYAAPLFVTAEFINNNTGEIKSQTVFMGDFPMMTEKGTFIINGTERVVVSQLVRSPGVYFDESIDKSTEKTLHSVKVIPGRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTNEQITERFGFSEIMMSTLEKDNTAGTDEALLDIYRKLRPGEPPTKESAQTLLENLFFKEKRYDLARVGRYKVNKKLGLNTDKPITSSTLTEEDVVATIEYLVRLHQGDTVMTVPGGVEVPVEVDDIDHFGNRRLRTVGELIQNQIRVGLSRMERVVRERMTTQDVEAITPQTLINIRP
type: DOMAIN
name: RNA_pol_bsu_protrusion
description: RNA polymerase, beta subunit, protrusion

phrase: QFMDQNNPLSGLTHKRRLSALGPGGLSRERAGLEVRDVHSSHYGRMCPIETPEGPNIGLIGSLSVYAR
type: DOMAIN
name: RNA_pol_Rpb2_3
description: RNA polymerase Rpb2, domain 3

phrase: YRKVENGVVTDQIDYLTADEEDRHVVAQANSPLDDEGHFTEDRVLVRRKGGEVEFVSATEVDYMDV
type: DOMAIN
name: DNA-dir_RNA_pol_bsu_external_1
description: DNA-directed RNA polymerase, beta subunit, external 1 domain

phrase: SEKAGVVEEVSADYITVMADDGTRHTYRMRKFARSNHGTCANQRPIVDAGQRVEAGQVVADGPCTQNGEMALGKNLLVAIMPWEGHNYEDAIILSNRLVEEDVLTSIHIEEHEIDARDTKLGAEEITRDIPNVSDEVLADLDERGIVRIGAEVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGKVIGIRVFSREDDDELPAGVNELVRVYVAQKRKISDGDKLAGRHGNKGVIGKILPVEDMPFLPDGTPVDIILNTHGVPRRMNIGQILETHLGWVAKAGWNINVAGADGVPDWAEKLPEELYSAPSDSIVATPVFDGARENELSGLLASTLPNRDGDVMVNEDGKAELFDGRSGEPFPYPVTVGYMYILKLHHLVDDKIHARSTGPYSMITQQPLGGKA
type: DOMAIN
name: DNA-dir_RNAP_su2_dom
description: DNA-directed RNA polymerase, subunit 2, hybrid-binding domain
Protein sequence:
MESVVQPSVFVVDGQTDIPFRRLEQNHRRRRCGTVQVSLALVLLLGAGLATQGWFLLRLHQRLGDIVAHLPDGGKGSWEKLIQDQRSHQANPAAHLTGANASLIGIGGPLLWETRLGLAFLRGLTYHDGALVTMEPGYYYVYSKVQLSGVGCPQGLANGLPITHGLYKRTSRYPKELELLVSRRSPCGRANSSRVWWDSSFLGGVVHLEAGEEVVVRVPGNRLVRPRDGTRSYFGAFMV

Annotated regions:
phrase: PAAHLTGANASLIGIGGPLLWETRLGLAFLRGLTYHDGALVTMEPGYYYVYSKVQLSGVGCPQGLANGLPITHGLYKRTSRYPKELELLVSRRSPCGRANSSRVWWDSSFLGGVVHLEAGEEVVVRVPGNRLVRPRDGTRSYFGAFM
type: DOMAIN
name: TNF_dom
description: Tumour necrosis factor domain

phrase: PAAHLTGANASLIGIGGPLLWETRLGLAFLRGLTYHDGALVTMEPGYYYVYSKVQLSGVGCPQGLANGLPITHGLYKRTSRYPKELELLVSRRSPCGRANSSRVWWDSSFLGGVVHLEAGEEVVVRVPGNRLVRPRDGTRSYFGA
type: DOMAIN
name: TNF_dom
description: Tumour necrosis factor domain

phrase: AAHLTGANASLIGIGGPLLWETRLGLAFLRGLTYHDGALVTMEPGYYYVYSKVQLSGVGCPQGLANGLPITHGLYKRTSRYPKELELLVSRRSPCGRANSSRVWWDSSFLGGVVHLEAGEEVVVRVPGNRLVRPRDGTRSYFGAFM
type: DOMAIN
name: TNF_dom
description: Tumour necrosis factor domain

phrase: LLWETRLGLAFLRGLTYHDGALVTMEPGYYYVYSKVQLSGVGCPQGLANGLPITHGLYKRTSRYPKELELLVSRRSPCGRANSSRVWWDSSFLGGVVHLEAGEEVVVRVPGNRLVRPRDGTRSYFGAFM
type: DOMAIN
name: TNF_dom
description: Tumour necrosis factor domain
Protein sequence:
MSDLLTDELGQAFQITDEDKGCRIKGQQCILANIGVVRSIATFLSTSLGPTGMDKILQSKDEDIVVTNDGATILKEMEMTENPISRLIVQLSESQDEEIGDGTTSVVVLASALLDQAQALLGQGVHPIKISEGFEVGLGHAVEHLSEISEEISDLKETMMKAAKTSLGSKIVYKSLERFAEICTDAVLMVADMERKDLDFELINIESKVGRDLSSTALIKGIVINKEFSHPQMKKEVKDGRIALLSCPFEPPKLKTKHSLVISNPKEYKELEEYEKKKFAEMIESIKRSGSNIVMCQWGFDDEANSLLMENGLPAVRWVGGHELELLAVHTGGSIVARFEDLEESDLGKARVREESLGTENDKIIVVENEGCSKAVTILVRGANDLVIEEAKRSIRDALCAVRNILTNSRIVYGGGSSEMSCSLALERIATGYSGEEREAILGFGRALEEIPLCLARNSGHDPIGYSSDLRKLQMESKNFHLGVDCLGDGEQDMKKLGVFDALSSKIRQFQMATQLVTMVLKIDNVVSDFHD

Annotated regions:
phrase: QDEEIGDG
type: CONSERVED_SITE
name: Chaperonin_TCP-1_CS
description: Chaperonin TCP-1, conserved site
Protein sequence:
MTVDAVRVELGARAYEVRIGPGLIARAGAEIAPLLRRPKLAILTDETVAGLHLAPFQAALAEAGIASSALALPAGEATKGWEQFSRAVEWLLEEKVERRDVVVALGGGVIGDLAGFAAAVLRRGVRFVQVPTTLLAQVDSSVGGKTGINTAQGKNLVGAFHQPSLVLADIGVLESLPARDFLAGYGEVVKYGLLGDADFFEWLEGAAPRLASDPEARQRAVRRSVEMKAEIVARDETEEGDRALLNLGHTFCHALEKATGYSDRLLHGEGVAIGCALAFELSQHMGLCPQEAPSRLRAHLRAMGMKVDLRDIPGDLPDAEGLLRLMAQDKKVVDGKLRFILARDIGAAFVAKDVPGDLVRRILQEALATR

Annotated regions:
phrase: GYGEVVKYGLLGDADFFEWLEGAAPRLASDPEARQRAVRRSVEMKAEIVARDETEEGDRALLNLGHTFCHALEKATGYSDRLLHGEGVAIGCALAFELSQHMGLCPQEAPSRLRAHLRAMGMKVDLRDIPGDLPDAEGLLRLMAQDKK
type: DOMAIN
name: DHQS_C
description: 3-dehydroquinate synthase, C-terminal domain

phrase: ALPAGEATKGWEQFSRAVEWLLEEKVERRDVVVALGGGVIGDLAGFAAAVLRRGVRFVQVPTTLLAQVDSSVGGKTGINTAQGKNLVGAFHQPSLVLADIGVLESLPARD
type: DOMAIN
name: DHQS/DOIS_N
description: 3-dehydroquinate synthase, N-terminal domain
Protein sequence:
MDTAEIRSRFLNHFARRGHTVVPSASLVAQDPTLLLVNAGMVPFKPYFLGDLPAPWPRAASVQKCVRTVDIENVGHTARHASFFQMCGNFSFGDYFKAEAIPFAFELLTEGFGFKADDLWATVYLDDDEAEGIWRKLLPAERIQRRGKEDNFWSMGVPGPCGPCSEIYFDRGCAYGREGGPIADEERYLEVWNLVFMQYERGEGAGYDYPIERELPARNIDTGMGLERMATILQGVDNLYEIDISRPVLDAAGRLTGRRYGADPADDVRLRVIADHTRTAAMLISDGVVPSNEGRGYVLRRMLRRAIRNARLLGAHEPVMSELFAVVGSAMGTIYPELLDNAETITGVAVAEEQAFAETLRTGTTIFDTAARQARSLGSTTLGGEAAFKLHDTYGFPIDLTLEMAAEAGLSVDEAGFRRLMDRQRQAAKADRAARRIGNVDLSAFRPILARSGPTTFTGYEELSRTSGVVGLVGIADGAGLAAAGEDTEVGVVLDATPFYAESGGQEPDLGRLRFDGGEVEVLDVQRPVPDLVLHRVRVLGGELRLGVEVFAEVDADRRRAVSRSHTATHLVHTAFRRALGEGATQAGSLNSPGRLRFDFHALGAVPPSVLADVEDEINEVALRDLPVRAFVTTQEEARRLGAMALFGEKYGDAVRVVDVGDYARELCGGTHVASSAQLGAVKLLSEASISAGTRRVEGLVGLDAFRYLAREHLLVSQLSTALKARPDELVDRVTDIVGRLRDAERELERLRAAAVLAGAGALAEGAEEVAGVAVVTAEVPAGTAPDDVRLLALDVRGRLAGRPAVVAVAKADGSSIVVVTDDAARGRGLRAGDLVRQSWASLGGKGGGKPDVAQGGGGNPQLVPAVFARLRGLVAEHASR

Annotated regions:
phrase: VRVVDVGDYARELCGGTHVASSAQLGAVKLLSEASISAGTRRV
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD

phrase: VRVVDVGDYARELCGGTHVASSAQLGAVKLLSEASISAGTRRV
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD

phrase: MDTAEIRSRFLNHFARRGHTVVPSASLVAQDPTLLLVNAGMVPFKPYFLGDLPAPWPRAASVQKCVRTVDIENVGHTARHASFFQMCGNFSFGDYFKAEAIPFAFELLTEGFGFKADDLWATVYLDDDEAEGIWRKLLPAERIQRRGKEDNFWSMGVPGPCGPCSEIYFDRGCAYGREGGPIADEERYLEVWNLVFMQYERGEGAGYDYPIERELPARNIDTGMGLERMATILQGVDNLYEIDISRPVLDAAGRLTGRRYGADPADDVRLRVIADHTRTAAMLISDGVVPSNEGRGYVLRRMLRRAIRNARLLGAHEPVMSELFAVVGSAMGTIYPELLDNAETITGVAVAEEQAFAETLRTGTTIFDTAARQARSLGSTTLGGEAAFKLHDTYGFPIDLTLEMAAEAGLSVDEAGFRRLMDRQRQAAKADRAARRIGNVDLSAFRPILARSGPTTFTGYEELSRTSGVVGLVGIADGAGLAAAGEDTEVGVVLDATPFYAESGGQEPDLGRLRFDGGEVEVLDVQRPVPDLVLHRVRVLGGELRLGVEVFAEVDADRRRAVSRSHTATHLVHTAFRRALGEGATQAGSLNSPGRLRFDFHALGAVPPSVLADVEDEINEVALRDLPVRAFVTTQEEARRLGAMALFGEKYGDAVRVVDVGDYARELCGGTHVASSAQLGAVKLLSEASISAGTRRVEGLVGLDAFRYLA
type: DOMAIN
name: Ala-tRNA-synth_IIc_core
description: Alanyl-tRNA synthetase, class IIc, core domain

phrase: AVVTAEVPAGTAPDDVRLLALDVRGRLAGRPAVVAVAKADGSSIVVVTDDAARGRGLRAGDLVRQSWASLGGKGGGKPDVAQGGGGNPQLVPAVFARLRGLV
type: DOMAIN
name: DHHA1_dom
description: DHHA1 domain

phrase: EIRSRFLNHFARRGHTVVPSASLVAQDPTLLLVNAGMVPFKPYFLGDLPAPWPRAASVQKCVRTVDIENVGHTARHASFFQMCGNFSFGDYFKAEAIPFAFELLTEGFGFKADDLWATVYLDDDEAEGIWRKLLPAERIQRRGKEDNFWSMGVPGPCGPCSEIYFDRGCAYGREGGPIADEERYLEVWNLVFMQYERGEGAGYDYPIERELPARNIDTGMGLERMATILQGVDNLYEIDISRPVLDAAGRLTGRRYGADPADDVRLRVIADHTRTAAMLISDGVVPSNEGRGYVLRRMLRRAIRNARLLGAHEPVMSELFAVVGSAMGTIYPELLDNAETITGVAVAEEQAFAETLRTGTTIFDTAARQARSLGSTTLGGEAAFKLHDTYGFPIDLTLEMAAEAGLSVDEAGFRRLMDRQRQAAKADRAARRIGNVDLSAFRPILARSGPTTFTGYEELSRTSGVVGLVGIADGAGLAAAGEDTEVGVVLDATPFYAESGGQEPDLGRLRFDGGEVEVLDVQRPVPDLVLHRVRVLGGELRLGVEVFAEVDAD
type: DOMAIN
name: Ala-tRNA-synth_IIc_N
description: Alanyl-tRNA synthetase, class IIc, N-terminal
Protein sequence:
MSFKPLHDRIAIKPIEQEEKTKGGIIIPDTVKEKPMQGEIVAVGNGIRNKKGEIHPLELKVGDKVLYGKWAGTEIEIKGTKLIVMKESDVFGIIN

Annotated regions:
phrase: FKPLHDRIAIKPIEQEEKTKGGII
type: CONSERVED_SITE
name: Chaprnonin_Cpn10_CS
description: Chaperonin GroES, conserved site
Protein sequence:
MTLREVSTASDLREFYDVLISGAGPAGMTAALEASAAGARVAVLDENPRPGGQIYRDITRNRPERKSYLGPDYWKGKQLAEVFDRSTIDYAPRATVWSLEGRDETVAKVRNVVGVTVGGSARMIEADAVVLATGAQERPMPVPGWTLQRVMTAGAAQIALKAAGAMPSEPIVLAGCGPLLYLLASQLIDAGVSDLTVLDTAQSTFRMSVLRHMPEFLRSPYVLKGIRLLFKVKCQACVVSGVRSIAITGSERAEGVRFTTAGGEQAIPASSVLLHQGVIPSTNLTNAAGCELRWNDEQRAFEPVTDNEGRSSRQGIYVAGDGSGIAGAQAAEVSGRIAALAALCDLGLVSVTAVAARLKPLHKQARRFLRGRAFLDALYTPRSSFLAPLNPETVVCRCEEITVRKIREAIALRPPGPNQLKTFLRCGMGQCQGRLCAATVTEIMAEERKVSPADVGTYRLRSPVKPVRLAELAQLPHTARALKAVTGRDPVDHDTNETGHISCPDTDIASCGQVQRRRPTSAGIVA

Annotated regions:
phrase: YDVLISGAGPAGMTAALEASAAGARVAVLDENPRPGGQIYRDITRNRPERKSYLGPDYWKGKQLAEVFDRSTIDYAPRATVWSLEGRDETVAKVRNVVGVTVGGSARMIEADAVVLATGAQERPMPVPGWTLQRVMTAGAAQIALKAAGAMPSEPIVLAGCGPLLYLLASQLIDAGVSDLTVLDTAQSTFRMSVLRHMPEFLRSPYVLKGIRLLFKVKCQACVVSGVRSIAITGSERAEGVRFTTAGGEQAIPASSVLLHQGVIPSTNLTNAAGCELRWNDEQRAFEPVTDNEGRSSRQGIYVAGDGSGIAGAQAA
type: DOMAIN
name: FAD/NAD-binding_dom
description: FAD/NAD(P)-binding domain

phrase: VVCRCEEITVRKIREAIALRPPGPNQLKTFLRCGMGQCQGRLCAATVTEIMA
type: DOMAIN
name: BFD-like_2Fe2S-bd_dom
description: BFD-like [2Fe-2S]-binding domain
Protein sequence:
MSDHRHRFLQLALTADALRFGQFTLKSGRLSPYFFNAGRFDSGSLLSQLGACYADAIDASGIKYDVVFGPAYKGIPLATAMACELAQRGRDLPLSFNRKEAKDHGEGGQLIGADMQGKRVLIVDDVITAGTAIREALGIIRAAGGTPAGIVVALDRQEIASETDRRSAAQSVAEEAGIPVIAVASLADLLDFASGNPELVGYRQPLEAYRAQYGVRSIR

Annotated regions:
phrase: LALTADALRFGQFTLKSGRLSPYFFNAGRFDSGSLLSQLGACYADAIDASGIKYDVVFGPAYKGIPLATAMACELAQRGRDLPLSFNRKEAKDHGEGGQLIGADMQGKRVLIVDDVITAGTAIREALGIIRAAGGTPAGIVVALDRQEIASETDRRSAAQSVAEEAGIPVIAVASLAD
type: DOMAIN
name: Or_phspho_trans_dom
description: Orotate phosphoribosyl transferase domain

phrase: LGACYADAIDASGIKYDVVFGPAYKGIPLATAMACELAQRGRDLPLSFNRKEAKDHGEGGQLIGADMQGKRVLIVDDVITAGTAIREALGIIRAAGGTPAGIVVALDRQ
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: IDASGIKYDVVFGPAYKGIPLATAMACELAQRGRDLPLSFNRKEAKDHGEGGQLIGADMQGKRVLIVDDVITAGTAIREALGIIRAAGGTPAGIVVALDRQ
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain
Protein sequence:
MSEEEKPKPKLSPALAAKMAAMKKKQEGGEEAAASQEGGEKPKAKLSPMMAARMAAKKSGDASPAPDKPKAEPVDENRDPEPHEMAYRVIKEKFGDAVSDLDNNPLMPFFTVENVDAWQAIAFFMREDERLRFDYMACLSGVDYGDGRLGVVYNFDALATHKHKLTVKVFCSKEDPRIPSVAEIWLTADWHEREAYDMYGIVFEGHPDMRRILCPDDWDGYPLRKDYKVQEVYHGIKVPY

Annotated regions:
phrase: DAWQAIAFFMREDERLRFDYMACLSGVDYGDGRLGVVYNFDALATHKHKLTVKVFCSKEDPRIPSVAEIWLTADWHEREAYDMYGIVFEGHPDMRRILCPDDWDGYPLRKDYKVQ
type: DOMAIN
name: NADH_UbQ_OxRdtase_30kDa_su
description: NADH:ubiquinone oxidoreductase, 30kDa subunit

phrase: EREAYDMYGIVFEGHPDMRRI
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_CS
description: NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site
Protein sequence:
MKLAILGAGCYRTHAASGITNFSRACEVAEMVGKPEIAMTHSTITMGAELKELAGVDEVVVADPVFDNQFTVIDDFAYEDVIEAHKEDPEKIMPQIREKVNEVAKELPKPPEGAIHFTHPEDLGFEITTDDREAVADADFIMTWFPKGDMQPGIINKFIDDIKPGAIVTHACTIPTTKFYKIFEEKHGDLVTRPETLNVTSYHPGAVPEMKGQVYIAEGYASEEAINTLFELGQKARGNAYKLPAELLGPVCDMCSALTAITYAGILTYRDSVTQVLGAPAGFAQMMAKESLEQLTALMDKVGIDKMEESLDPGALLGTADSMNFGASAEILPTVFEVLEKRKK

Annotated regions:
phrase: MKLAILGAGCYRTHAASGITNFSRACEVAEMVGKPEIAMTHSTITMGAELKELAGVDEVVVADPVFDNQFTVIDDFAYEDVIEAHKEDPEKIMPQIREKVNEVAKELPKPPEGAIHFTHPEDLGFEITTDDREAVADADFIMTWFPKGDMQPGIINKFIDDIKPGAIVTHACTIPTTKFYKIFEEKHGDLVTRPETLNVTSYHPGAVPEMKGQVYIAEGYASEEAINTLFELGQKARGNA
type: DOMAIN
name: HMD_N
description: 5,10-methenyltetrahydromethanopterin hydrogenase, N-terminal domain

phrase: AELLGPVCDMCSALTAITYAGILTYRDSVTQVLGAPAGFAQMMAKESLEQLTALMDKVGIDKMEESLDPGALLGTADSMNFGASAEILPTVFEVLE
type: DOMAIN
name: HMD_C
description: H2-forming N5,N10-methylenetetrahydromethanopterin dehydrogenase, C-terminal
Protein sequence:
MLDAKYLRENLEEVEARLATRGSEVSLGRFRELDERRRALLTESESLKALKNSVSEAISKVKDKSQIQDKIAEMREVGVRIKGLDDELRGIEDELQMVLLTVPNVPHPTVPVGASEADNRQVRTWGEPPCFAFDPKPHWEIGEGLGILDFERGAKLTGARFTLYRGAGARLERALVNFMLDLHTERHNYLEMLPPFVVNRESMTGTGQLPKFEDDLFHLEGVDYFLIPTAEVPVTNIHRAEILKAADLPLSYTAYTPCFRKEAGSYGKDVRGLIRQHQFNKVELVKFVHPATSYDELEKLLSNAEEVLRQLGLAYRVVELCTGDMGFSAAKTYDIEVWLPGQETYREISSCSNFEDFQSRRASIRFREDEKSKPEFVHTLNGSGLAVGRTLVAILENYQQEDGSVVIPDVLRPYMGGLQKIG

Annotated regions:
phrase: VDYFLIPTAEVPVTNIHRAEILKAADLPLSYTAYTPCFRKEAGSYGKDVRGLIRQHQFNKVELVKFVHPATSYDELEKLLSNAEEVLRQLGLAYRVVELCTGDMGFSAAKTYDIEVWLPGQETYREISSCSNFEDFQSRRASIRFREDEKSKPEFVHTLNGSGLAVGRTLVAILEN
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: DNRQVRTWGEPPCFAFDPKPHWEIGEGLGILDFERGAKLTGARFTLYRGAGARLERALVNFMLDLHTERHNYLEMLPPFVVNRESMTGTGQLPKFEDDLFHLEGVDYFLIPTAEVPVTNIHRAEILKAADLPLSYTAYTPCFRKEAGSYGKDVRGLIRQHQFNKVELVKFVHPATSYDELEKLLSNAEEVLRQLGLAYRVVELCTGDMGFSAAKTYDIEVWLPGQETYREISSCSNFEDFQSRRASIRFREDEKSKPEFVHTLNGSGLAVGRTLVAILENYQQEDGSVVIPDVLRPY
type: DOMAIN
name: SerRS_core
description: Serine-tRNA ligase catalytic core domain

phrase: MLDAKYLRENLEEVEARLATRGSEVSLGRFRELDERRRALLTESESLKALKNSVSEAISKVKDKSQIQDKIAEMREVGVRIKGLDDELRGIEDELQMVLLTVPNV
type: DOMAIN
name: Ser-tRNA-synth_1_N
description: Serine-tRNA synthetase, type1, N-terminal

phrase: YRGAGARLERALVNFMLDLHTERHNYLEMLPPFVVNRESMTGTGQLPKFEDDLFHLEGVDYFLIPTAEVPVTNIHRAEILKAADLPLSYTAYTPCFRKEAGSYGKDVRGLIRQHQFNKVELVKFVHPATSYDELEKLLSNAEEVLRQLGLAYRVVELCTGDMGFSAAKTYDIEVWLPGQETYREISSCSNFEDFQSRRASIRFREDEKSKPEFVHTLNGSGLAVGRTLVAILENYQQEDGSVVI
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II
Protein sequence:
MYAVFQSGGKQHRVSEGQTVRLEKLDIATGETIEFDQVLMIANGEDVKIGAPLVSGGVIKAEIVAHGRGDKIKIVKFRRRKHYRKQQGHRQWFTDVKITGISA

Annotated regions:
phrase: IKIVKFRRRKHYRKQQGHRQWF
type: CONSERVED_SITE
name: Ribosomal_bL21_CS
description: Large ribosomal subunit protein bL21, conserved site
Protein sequence:
MDKLSLYGETFTSRLLIGSALYPSPAIMLDSVRASGAEIITLSLRRQNPAQQDGKAIWDYIRSSGCKLLPNTAGCKSAKEAVTLAEMSREIFQTDWLKLEVIGDDYTLQPDPYGLVEAAKELSKRGFKVLPYCTEDLVLCRRLLDAGCEALMPWGAPIGTGQGLLNKYNLGMLRERLPDTPMIIDAGLGAPSHATEAMEMGFDAVLLNTAIAKAHDPVGMGVAFKLAVEAGRAGYNAGLMLKRQTASPSTPTIGMPFWRRHD

Annotated regions:
phrase: LYGETFTSRLLIGSALYPSPAIMLDSVRASGAEIITLSLRRQNPAQQDGKAIWDYIRSSGCKLLPNTAGCKSAKEAVTLAEMSREIFQTDWLKLEVIGDDYTLQPDPYGLVEAAKELSKRGFKVLPYCTEDLVLCRRLLDAGCEALMPWGAPIGTGQGLLNKYNLGMLRERLPDTPMIIDAGLGAPSHATEAMEMGFDAVLLNTAIAKAHDPVGMGVAFKLAVEAGRAGYNAGLMLKRQTASPST
type: DOMAIN
name: Thiazole_synthase_ThiG
description: Thiazole synthase ThiG