nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MEGRVSSVGSPHSFLNAPVLFRGPVEPLVFLANFALVLQGPLTTQYLWHRFSTELGYNGTRHRENCGNQSADPLMKEVETLTSHWTLYMNVGGFLVGLFWSTLLGAWSDRVGRRPLLVLASLGLLLQAVVSIFVVQLELHVGFFVLGRALCALLGDFNGLLAASFASVADVSSNHSRTFRMALLEACIGVAGTLASLLGGHWLRAQGYANPFWLALALLIVMALYAAFCFGETVKEPKSTRLFTLRHHRSIARLYVVPAPEKSRMHLALYSLAIFVVVTVHFGAQDILTLYELSAPLCWDSKLIGYGSAAQHLPYLTSLLGLRLLQFCLADTWVAEIGLAFNILGMVVFAFATITPLMFTGYGLLFLSLVTTPVIRAKLSKLVSESEQGALFSAVACVNSLAMLMASGIFNSIYPATLNFMKGFPFLLGAGLLFIPAILIGVLEKVNPHPEFQQFPQSP

Annotated regions:
phrase: LGAWSDRVGRRPLLVLA
type: CONSERVED_SITE
name: Sugar_transporter_CS
description: Sugar transporter, conserved site
Protein sequence:
MQFFTALAAVGALVAPALALPTQVPANQSLIDVQLSATGNSMIKAVITNKGTRALNLLKFNTIMDENPTAKVMVFDKNGAEVEFTGMLPRYDMNSLSTDYFATLAPQASVEHSFDIAATHNIKESGKYTLSAHGLIPTAEEHGTTITGQAFYESNTLEMEIDASKAAMVPRAFEELDAHIVGTIDKRSGIVTSSCDASQLRIVKQALANSRMLALNAARAASSNPSKVREYFGSSDSSIMQKVASRFQSVARESTASGGQTTYHCTDNRGSCKPGVLAYTLPSTNTVYNCPSYYREPSLTKRCHAQDQATTTLHELTHNPVVVSPFCKDLGYGYRLATGLPTSKAIQNADNYALFANEESSPVFFVPVFYSNG

Annotated regions:
Protein sequence:
MRVPKKERQRLLQETIEHNPFIKDEELSKQFSVSIQTIRLDRMELKIPEVRERIKHVASEHLDEVKSLSMSEVIGDMIDLKLDDSAISVLDIEKEHVFSRNEIARGHVLFAQANSLAVALINDELALTTKADIRFSRQVHLGERVVAKARVMKLRGDGRTDVTVESYVGEECVFDGDFTIYRRGEEEQA

Annotated regions:
phrase: IARGHVLFAQANSLAVALINDELALTTKADIRFSRQVHLGERVVAKARVMKL
type: DOMAIN
name: Thioestr_dom
description: Thioesterase domain
Protein sequence:
MIKQALISVSDKTGIVDFAKSLSDLGVKLLSTGGTAKLLADAGLPVTEVADYTGFPEMLDGRVKTLHPKVHGGILARRDLPEHMQALEQHGIPTIDLLVVNLYPFVATIAKDDCTLADAIENIDIGGPTMLRSAAKNHRDVTVVVDPADYAVVLDEMKANGNAVGYATNFRLATKVFAHTAQYDGAITNYLTSLTDELKHASRSAYPATLNLAFDKVQDLRYGENPHQSAAFYRDLATPAGALANYRQLQGKELSYNNIADSDAAWECVKTFDAPACVIIKHANPCGVAVGNDSADAYAKAFQTDPTSAFGGIIAFNREVDEAAAQAVAKQFVEVLIAPSFSDAAKQVFAAKQNVRLLEIALGDGHNAFDLKRVGGGLLVQSLDSKNVQPSELRVVTKRQPTAKEMDDLLFAWRVAKYVKSNAIVFCGNGMTLGVGAGQMSRVDSARIASIKAQNAGLTLAGSAVASDAFFPFRDGLDVVVAAGATCVIQPGGSMRDDEVIAAADEHNIAMILTGVRHFRH

Annotated regions:
phrase: GIVDFAKSLSDLGVKLLSTGGTAKLLADAGLPVTEVADYTGFPEMLDGRVKTLHPKVHGGILARRDLPEHMQALEQHGIPTIDLLVVNLYPFVATIAKDDCTLADAIENIDIGGP
type: DOMAIN
name: MGS-like_dom
description: Methylglyoxal synthase-like domain

phrase: GIVDFAKSLSDLGVKLLSTGGTAKLLADAGLPVTEVADYTGFPEMLDGRVKTLHPKVHGGILARRDLPEHMQALEQHGIPTIDLLVVNLYPFVATIAKDDCTLADAIENIDIGGP
type: DOMAIN
name: MGS-like_dom
description: Methylglyoxal synthase-like domain

phrase: MIKQALISVSDKTGIVDFAKSLSDLGVKLLSTGGTAKLLADAGLPVTEVADYTGFPEMLDGRVKTLHPKVHGGILARRDLPEHMQALEQHGIPTIDLLVVNLYPFVATIAKDDCTLADAIENIDIGGPTMLRSAAKNHRDVTVV
type: DOMAIN
name: MGS-like_dom
description: Methylglyoxal synthase-like domain
Protein sequence:
MSINTSGKITSATERADSADFRTIIRNKIPLMDVRAPVEFGKGAFDLSINYPLMNNDERADVGICYKQNGQEAAIKLGNALVSGQSKARRLTQWQTFARENPQGYLYCFRGGLRSQTVQRWLKESGINYPLITGGYKALRQFLLNELEQLALHPLTILAGNTGSGKTPFLAHCANSLDLEGAAGHRGSSFGSFVTPQSNQINFENKLAEQYIRGDFSLEQRLVLEDEGRLIGSVHLPESLRNAMTLAPLVVIEESLEYRLEQIYQEYIIKMTAQYQAAYGVEQGFTAFSEYLEHGLFKVRKRLGTQRYGQLKEIQSTALTQQNKGQPQYHLDWLKPLLSEYYDPMYQYQLGLKSDRVIFRGNNSECLAFLRD

Annotated regions:
phrase: RADSADFRTIIRNKIPLMDVRAPVEFGKGAFDLSINYPLMNNDERADVGICYKQNGQEAAIKLGNALVSGQSKARRLTQWQTFARENPQGYLYCFRGGLRSQTVQRWLKESGINYPLITGGYKALRQFLL
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain

phrase: IRNKIPLMDVRAPVEFGKGAFDLSINYPLMNNDERADVGICYKQNGQEAAIKLGNALVSGQSKARRLTQWQTFARENPQGYLYCFRGGLRSQTVQRWLKESGINYPLITGGYKALRQFLLNEL
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain
Protein sequence:
MVKVKICGLITQEDAMLACQYGADLLGFNFYEKSPRYISPAKAAEIIKTLPSNVASVGVFVGKEANEINQICEEAMIDIAQIHDESLCAKDFTKLRPKIIKAFRVQNTFDTREIRRFYEQTGVNTFIFDAFQKDLYGGTGKRLDVELAHKVFKEIEGFGYGFLAGGLNEKNVETTVRLLKPYGVDVASGIESEPGKKAHDKMALFIREAKKSLCLEPGY

Annotated regions:
phrase: VKICGLITQEDAMLACQYGADLLGFNFYEKSPRYISPAKAAEIIKTLPSNVASVGVFVGKEANEINQICEEAMIDIAQIHDESLCAKDFTKLRPKIIKAFRVQNTFDTREIRRFYEQTGVNTFIFDAFQKDLYGGTGKRLDVELAHKVFKEIEGFGYGFLAGGLNEKNVETTVRLLKPYGVDVASGIESEPGKKAHDKMALFIRE
type: DOMAIN
name: PRAI_dom
description: N-(5'phosphoribosyl) anthranilate isomerase (PRAI) domain

phrase: VKICGLITQEDAMLACQYGADLLGFNFYEKSPRYISPAKAAEIIKTLPSNVASVGVFVGKEANEINQICEEAMIDIAQIHDESLCAKDFTKLRPKIIKAFRVQNTFDTREIRRFYEQTGVNTFIFDAFQKDLYGGTGKRLDVELAHKVFKEIEGFGYGFLAGGLNEKNVETTVRLLKPYGVDVASGIESEPGKKAHDKMALFI
type: DOMAIN
name: PRAI_dom
description: N-(5'phosphoribosyl) anthranilate isomerase (PRAI) domain

phrase: VKVKICGLITQEDAMLACQYGADLLGFNFYEKSPRYISPAKAAEIIKTLPSNVASVGVFVGKEANEINQICEEAMIDIAQIHDESLCAKDFTKLRPKIIKAFRVQNTFDTREIRRFYEQTGVNTFIFDAFQKDLYGGTGKRLDVELAHKVFKEIEGFGYGFLAGGLNEKNVETTVRLLKPYGVDVASGIESEPGKKAHDKMALFIREAKK
type: DOMAIN
name: PRAI_dom
description: N-(5'phosphoribosyl) anthranilate isomerase (PRAI) domain
Protein sequence:
MAFYPLQIAGLVLGFLGMVGTLATTLLPQWRVSAFIGSNIIVFERIWEGLWMNCVRQAKARLQCKFYSSMLALSPALEAARALMCVAVALSLIALIIGICGMKKIQCTGSNERAKAYLLGTSGVLFILTGIFVLIPVCWTANIIIRDFYNPAVHVGQKRELGAALFLGWASVAVLFIAGGLLCGFCCCNRKKQRDGYPAPRPSMPRTDERRRNMTRQSETPTSYV

Annotated regions:
phrase: GLWMNCVRQAKARLQ
type: CONSERVED_SITE
name: Claudin_CS
description: Claudin, conserved site
Protein sequence:
MHEKYVPSDVESAAQGQWRATDAYKTTETADKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAAMANGVPPAKWTYDNIAYMKKQMQSMGLAIDWSREVATCSPDYYKWNQWIFLKMLEKGIAYKKTGTVNWDPVDQTVLANEQVIDGRGWRSGALVEKREIPMYYMRITQYADELLNDLDGLGWPERVKVMQQNWIGKSFGVNFGFPYELDGEQKLLRVFTTRADTIMGVTFCAVAAEHPLATRLAQGRPDLQSFIDECKHGGVAEADMATMEKKGMATGFFVTHPLTQEKVEVWIGNYVLMSYGEGAVMGVPAHDERDFAFVKKYGIPVKQVVAVEGETFSTDAWQESYGDKENGVLINSGKYDGLKYGEAVDAIAADLKALGLGEKQVTWRLRDWGISRQRYWGTPIPIIHCPSCGDVPVPEKDLPVVLPEDLVPDGTGNPLAKSEAFLNCTCPTCGAAAKRETDTMDTFVDSSWYFYRYAAPDAKTMVDARTDYWMPMDQYIGGIEHAILHLLYSRFWAKVCRDLGIVKFGEPAKNLLTQGMVLNETYYRENDAGKKTWYNPADVTVTHDDKGRPVGATLNADGQPVVLGGVEKMSKSKNNGVDPQVLIDQYGADTARLFTMFAAPPEQQLEWSGAGVEGASRFLRRVWAFGQANETALTERAPFDAAKLADTEKTLRREIYSVLKQADFDYQRLQYNTVVSAAMKMLNAIEGAKGASAAVLRETYGVLLRVLYPVVP

Annotated regions:
phrase: LRDWGISRQRYWGTPIPIIHCPSCGDVPVPEKDLPVVLPEDLVPDGTGNPLAKSEAFLNCTCPTCGAAAKRETDTMDTFVDSSWYFYRYAAPDAKTMVDARTDYWMPMDQYIGGIEHAILHLLYSRFWAKVCRDLGIVKFGEPAKNLLTQGMVLN
type: DOMAIN
name: aa-tRNA-synth_Ia
description: Aminoacyl-tRNA synthetase, class Ia

phrase: QNWIGKSFGVNFGFPYELDGEQKLLRVFTTRADTIMGVTFCAVAAEHPLATRLAQGRPDLQSFIDECKHGGVAEADMATMEKKGMATGFFVTHPLTQEKVEVWIGNYVLMSYGEGAVMGVPAHDERDFAFVKKYGIPVKQVVAVEGETFSTDAWQESYGDKENGVLINSGKYDGLKYGEAVDAIAAD
type: DOMAIN
name: Leu_tRNA-synth_edit
description: Leucyl-tRNA synthetase, editing domain

phrase: VSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGMPAENAAMANGVPPAKWTYDNIAYMKKQMQSMGLAIDWSREVATCSPDYYKWNQWIFLKMLEKGIAYKKTGTVNWDPVDQTVLANEQ
type: DOMAIN
name: Methionyl/Leucyl_tRNA_Synth
description: Methionyl/Leucyl tRNA synthetase

phrase: PYPSGKLHMGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: EKMSKSKNNGVDPQVLIDQYGADTARLFTMFAAPPEQQLE
type: DOMAIN
name: aa-tRNA-synth_Ia
description: Aminoacyl-tRNA synthetase, class Ia
Protein sequence:
MSNGYEDHMDDVCRDDIGRTNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNAKDAERAINTLNGLRLQSKTIKVSFARPSSETIKDANLYISGLPRTMTQKDVEDMFLPFGHIINSRVLVDQATGLSRGVAFIRFDKRSEAEEAIASFNGHKPPGSSEPITVKFAANPNQSKNMALLSQICHSPARRFGGPVHHQAQRFRFSPMGVDHMSSISSVNVASSASSGWCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKTLQVSFKTSKSHK

Annotated regions:
phrase: WCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKTLQVSFKT
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: ANLYISGLPRTMTQKDVEDMFLPFGHIINSRVLVDQATGLSRGVAFIRFDKRSEAEEAIASFNGHKPPGSSEPITVKFAANPN
type: DOMAIN
name: HuR_RRM2
description: HuR, RNA recognition motif 2

phrase: NLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNAKDAERAINTLNGLRLQSKTIKV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: CIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKTLQV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: NLYISGLPRTMTQKDVEDMFLPFGHIINSRVLVDQATGLSRGVAFIRFDKRSEAEEAIASFNGHKPPGSSEPITV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: IFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIASLNGYRLGDKT
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: LYISGLPRTMTQKDVEDMFLPFGHIINSRVLVDQATGLSRGVAFIRFDKRSEAEEAIASFNGHKPP
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNAKDAERAINTLNGLRLQSKTI
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: ANLYISGLPRTMTQKDVEDMFLPFGHIINSRVLVDQATGLSRGVAFIRFDKRSEAEEAIASFNGHKPPGSSEPITVKFAA
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: TNLIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYLNAKDAERAINTLNGLRLQSKTIKVSFAR
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain
Protein sequence:
MNTLLVTGTSTDVGKTVVTAALTALARAEALPVAVCKPAQTGVAPGEPGDLAEVRRLAGPVPTLELARYPEPLAPDTAARRCGAPLLTLDETATAVRGLDAELTVVEGAGGLLVRIGEFTLLDLARELDAPVLVVAAAGLGTLNHTELTIRALDAAGVRCAGVVIGAWPAEPDLASVCNREDLPRLTGVPIVGAVPAGVGAWDHDRFTAAVPGWFAPGWSPRLPFNSDSPPSTWGFDTSQSGT

Annotated regions:
Protein sequence:
MQSVRQTVLFESEEAWRAGAEQNATAITVHARGGEVVQTRRTWAAAGGPRVRVTWSGGRTVSEVSPQLAAGLSVYVEGGAHVSRDFVQARGQAVFHSAQLELDAVRAWWPRELAVQPEALRWAECAYDIELGRQVRVDEYCALRAGETVALTAAAGGTDEAKVETGVFYPEISDGADVSLSGFRCTWLRDGSGRTDTCQKTLLMYKPAHVHMPEPAVGIELVQPVTLHPVIEVDLSSVSASGPACAHHVFLQLPAQLFVDKFQQPPELLFGEDDLELPEYKVEAWGSEVIYALEPGRVNRVQLHSRYARPGPGRRYEVVPLRPYVFEACDTGSADIAENPFYSKGMGFEAYFTADTVFKHRNSTRLNIPVPRGNSNDFPSIQYVTVLSILFSVLYISYCLFRRPVAASARASG

Annotated regions:
Protein sequence:
MSTVTITDLARENVRNLTPYQSARRLGGNGDVWLNANEYPTAVEFQLTQQTLNRYPECQPKVVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEVINLLMKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALQEIPCVEQVFDSETNYILARFKASSAVFKSLWDQGIILRDQNKQPSLSGCLRITVGTREESQRVIDALRAEQV

Annotated regions:
phrase: VWLNANEYPTAVEFQLTQQTLNRYPECQPKVVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQGISDKLDGVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANEEVINLLMKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALQEIPCVEQVFDSETNYILARFKASSAVFKSLWDQGIILRDQNKQPSLSGCLRITVGTREESQRVIDA
type: DOMAIN
name: Aminotransferase_I/II_large
description: Aminotransferase, class I/classII, large domain

phrase: TLSKAFALA
type: BINDING_SITE
name: Aminotrans_II_pyridoxalP_BS
description: Aminotransferase, class-II, pyridoxal-phosphate binding site
Protein sequence:
MTETASASLPETPPAATAERLSLVGLDREELGEALRQVGVPERQVRMRVAQLWHWIYLRGVDDFAAMTNIAKDLRTRLDAACSIAYPEIVSEQVSVDGTRKWLLRFPPAGAGRPVEVETVYIPEEGRGTLCVSSQVGCTLNCAFCHTGTQKLVRNLSAGEIVAQIRLARHRIGDFPDAATPTGAIVPGEGRLVTNIVMMGMGEPLYNFDNVKKALFIASDNEGLGLSRRRITLSTAGVVPMIERTGAEIGAMLAISLHAVRDELRDVLVPINRKYPIAELMEACRTFPGLSNARRITFEYVMLKGVNDSPEEARELVRLLKGIPAKINLIPFNPWPGSAYECSDWETIETFAAIVNRAGYASPIRTPRGRDILAACGQLKSTSERLRARERMAMEAMIAGTGA

Annotated regions:
phrase: EEGRGTLCVSSQVGCTLNCAFCHTGTQKLVRNLSAGEIVAQIRLARHRIGDFPDAATPTGAIVPGEGRLVTNIVMMGMGEPLYNFDNVKKALFIASDNEGLGLSRRRITLSTAGVVPMIERTGAEIGAMLAISLHAVRDELRDVLVPINRKYPIAELMEACRTFPGLSNARRITFEYVMLKGVNDSPEEARELVRLLKGIPAKINLIPFNPWPGSAYECSDWETIETFAAIVNRAGYASPI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TNIVMMGMGEPLYNFDNVKKALFIASDNEGLGLSRRRITLSTAGVVPMIERTGAEIGAMLAISLHAVRDELRDVLVPINRKYPIAELMEACRTFPGLSNARRITFEYVMLKGVNDSPEEARE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LVGLDREELGEALRQVGVPERQVRMRVAQLWHWIYLRGVDDFAAMTNIAKDLRTRLDAACS
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MVVVLDTVSANPVRPRHPEKVNRPDALSPPKPDWIRVRAPNSRGYADTRRIVKENGLVTVCEEAGCPNIGECWDKKHATFMIMGDTCTRACAFCNVRTGMPAALEASEPEYVAEATHKLGLAHVVVTSVDRDDLDDGGAEHFAQTIRAIRERCPATTIEILTPDFLRKDGALEKVVAAKPDVFNHNLETVPSRYLTVRPGARYFHSIRLLQRVKEIDPTIFTKSGIMVGLGEERHEVLQVMDDLRSADVDFLTIGQYLQPTRKHHAVMRYVTPDEFQGYETVGYTKGFLMVSASPLTRSSHHAGEDFAKLQTARAKLLR

Annotated regions:
phrase: MIMGDTCTRACAFCNVRTGMPAALEASEPEYVAEATHKLGLAHVVVTSVDRDDLDDGGAEHFAQTIRAIRERCPATTIEILTPDFLRKDGALEKVVAAKPDVFNHNLETVPSRYLTVRPGARYFHSIRLLQRVKEIDPTIFTKSGIMVGLGEERHEVLQVMDD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SPPKPDWIRVRAPNSRGYADTRRIVKENGLVTVCEEAGCPNIGECWDKKHATFMIMGDTCTRACAFCNVRTGMPAALEASEPEYVAEATHKLGLAHVVVTSVDRDDLDDGGAEHFAQTIRAIRERCPATTIEILTPDFLRKDGALEKVVAAKPDVFNHNLETVPSRYLTVRPGARYFHSIRLLQRVKEIDPTIFTKSGIMVGLGEERHEVLQVMDDLRSADVDFLTIGQYLQPTRKHHAVMRYVTPDEFQGYETVGYTKGFLMVSASPLTRSSHHAGEDFA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: HATFMIMGDTCTRACAFCNVRTGMPAALEASEPEYVAEATHKLGLAHVVVTSVDRDDLDDGGAEHFAQTIRAIRERCPATTIEILTPDFLRKDGALEKVVAAKPDVFNHNLETVPSRYLTVRPGARYFHSIRLLQRVKEIDPTIFTKSGIMVGLGEERHEVLQVMDDLRSADVDFLTIGQYLQPTRKHHAVMRYVTPDEFQGYETVG
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: WDKKHATFMIMGDTCTRACAFCNVRTGMPAALEASEPEYVAEATHKLGLAHVVVTSVDRDDLDDGGAEHFAQTIRAIRERCPATTIEILTPDFLRKDGALEKVVAAKPDVFNHNLETVPSRYLTVRPGARYFHSIRLLQRVKEIDPTIFTKSGIMVGLGEERHEVLQVMDDLRSADVDFLTIGQYLQPTRKHHAVMRYVTPDEFQGYETVGYTKGF
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MIIPALDLIDGTVVRLHQGDYGKQRDYGNDPLPRLQDYATQGAEVLHLVDLTGAKDPAKRQIPLIKTLVAGVNVPVQVGGGVRSEEDVAALLEAGVARVVVGSTAVKSPEMVKGWFERFGADALVLALDVRIDEQGNKQVAVSGWQENSGVSLEQLVETYLPIGLKHVLCTDISRDGTLAGSNVSLYEEVCARYPQVAFQSSGGIGDINDVAALRGTGVRGVIVGRALLEGKFTVKEAIACWQNA

Annotated regions:
Protein sequence:
MRKPIIAGNWKMNKTAAKAGQFAEDVKNNVPSSDAVESVVAAPALFLQELVRLTEGTDLRVSAQNCYFEDEGAFTGEISPFALADLGVSYVIIGHSERREYFHETDEDINKKAHAIFKHGMTPIICCGETLDQREAGQTDTWVRGQIRAALAGLTEEQVIKSVIAYEPIWAIGTGKSSTSADANETCAVIRAEVADAVSQKAADAVRIQYGGSVKPENIADYLAESDIDGALVGGASLEPASFLALLEAVK

Annotated regions:
phrase: AYEPIWAIGT
type: ACTIVE_SITE
name: Triosephosphate_isomerase_AS
description: Triosephosphate isomerase, active site
Protein sequence:
MLLFTPGPVAINEEMRTSFSQPMPHHRTKDFEKIFQSVRENLKKMTGLEEVLLLSSSGTGAMEASVISLCQKELLFVNAGKFGERFGKIAKAHSIKAHELVYEWDTPAQVDEILSVLKANPNIDAFCIQACESSGGLRHPVEKIAQAIKETNPNVFVIVDAITALGVEPLEITHVDALIGGSQKAFMLPPAMSLVALSQNAIERIEERNVGFYFNLKSELKNQRNNTTSYTAPILHTLGLQRYFELVQNLGGFEALYRETKKAALATQKAVLALGLKIFPKSPSLSMTTIVNEHAKELRNLLKEKYQVQFAGGQEPYKDALIRINHMGIIPVYKSAYALNALELALNDLDLREFDGVANATFLKQYYGI

Annotated regions:
phrase: RTSFSQPMPHHRTKDFEKIFQSVRENLKKMTGLEEVLLLSSSGTGAMEASVISLCQKELLFVNAGKFGERFGKIAKAHSIKAHELVYEWDTPAQVDEILSVLKANPNIDAFCIQACESSGGLRHPVEKIAQAIKETNPNVFVIVDAITALGVEPLEITHVDALIGGSQKAFMLPPAMSLVALSQNAIERIEERNVGFYFNLKSELKNQRNNTTSYTAPILHTLGLQRYFELVQNLGGFEALYRETKKAALATQKAVLALGLKIFPKSPSLSMTTIVNEHAKELRNLLKEKYQVQF
type: DOMAIN
name: Aminotrans_V_dom
description: Aminotransferase class V domain
Protein sequence:
MQNLDPQELEKFEKMAKSWWDPNGDFKPIHQLNPTRLQYIQQQANGLTEKKVLDVGCGGGILSEAMAKQGAIVTGIDMTVAPLEVARLHAKEQGLVIDYQQITVEEFLQKQTALYAEKFDVITCMEMLEHVPDPLSIIQSCRALLKPNGVLFFSTINHTFKAWALVVLGAEYILKMLPKGTHDYDKFIKPAELLHWTDQANLVCKNICGYHYNLLTGKFWLNQDVSANYMATFQHKSI

Annotated regions:
Protein sequence:
MAHKQTKFIFVTGGVVSGLGKGVSAASIGALMENRGLKIAMLKMDPYINVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTSAPIGHWSNFTSGQVYDAVISKERRGEYLGKTVQVIPHVTDEIKSRILKAAEGVDLLIVEVGGTVGDIESLPFLESIRQLRSDVGAAHTLYLHLTMVPYVGSTGELKTKPTQHSVKELRAIGIQPDIILCRSTQAIGQELKDKIALFCSTSPATVFECRDVDTIYAVPLSLNEQGLDDKIAELLNIWSRGAALDRWKKVVDTLRNPKRQCTIGVVGKYVHLVDSYRSLHEALLHGGLANGGSVQLEYLNAEEIADHDPKQLSRLDGILVPGGFGERGTEGKILAVQFAREHGVPFFGICLGMQMMVVEFARHVAGLQGANSTEFDPHTPYPVIDLMESQRAVKDKGGTMRLGAYPCRLQAGSRARQVYQRDEISERHRHRFEVNNAFREPLSQKGLVFSGLSPDGHLVEMAELPGHPFFLGCQFHPEFKSKPLSPHPLFASFVQAAMARRERSGA

Annotated regions:
phrase: KFIFVTGGVVSGLGKGVSAASIGALMENRGLKIAMLKMDPYINVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTSAPIGHWSNFTSGQVYDAVISKERRGEYLGKTVQVIPHVTDEIKSRILKAAEGVDLLIVEVGGTVGDIESLPFLESIRQLRSDVGAAHTLYLHLTMVPYVGSTGELKTKPTQHSVKELRAIGIQPDIILCRSTQAIGQELKDKIALFCSTSPATVFECRDVDTIYAVPLSLNEQGLDDKIA
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: CTIGVVGKYVHLVDSYRSLHEALLHGGLANGGSVQLEYLNAEEIADHDPKQLSRLDGILVPGGFGERGTEGKILAVQFAREHGVPFFGICLGMQMMVVEFARHVAGLQGANSTEFDPHTPYPVIDLMESQRAVKDKGGTMRLGAYPCRLQAGSRARQVYQRDEISERHRHRFEVNNAFREPLSQKGLVFSGLSPDGHLVEMAELPGHPFFLGCQFHPEFKSKPLSPHPLFASF
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain

phrase: KFIFVTGGVVSGLGKGVSAASIGALMENRGLKIAMLKMDPYINVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTSAPIGHWSNFTSGQVYDAVISKERRGEYLGKTVQVIPHVTDEIKSRILKAAEGVDLLIVEVGGTVGDIESLPFLESIRQLRSDVGAAHTLYLHLTMVPYVGSTGELKTKPTQHSVKELRAIGIQPDIILCRSTQAIGQELKDKIALFCSTSPATVFECRDVDTIYAVPLSLNEQGLDDKIAELLN
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: LVDSYRSLHEALLHGGLANGGSVQLEYLNAEEIADHDPKQLSRLDGILVPGGFGERGTEGKILAVQFAREHGVPFFGICLGMQMMVVEFARHVAGLQGANSTEFDPHTPYPVIDLMESQRAVKDKGGTMRLGAYPCRLQAGSRARQVYQRDEISERHRHRFEVNNAFREPLSQKGLVFSGLSPDGHLVEMAELPGHPFFLGCQFHPEFKSKPLSPHPLFASFV
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase
Protein sequence:
MNHIVWHQHAITHSERAAQKGHRGAILWFTGLSGAGKSTLAGALEAELFRRGLHSYLLDGDNVRHGLCKDLGFSLEDRRENIRRVGEVAKLMLDAGLLVLSAFVSPQRAERDLVRALVGEGEFIEVHVATPLTVCESRDPKGLYQKARAGEIKDFTGISSPYEAPVSAELVIDTSEGDLDSQVAKLVDYLISGGYIPA

Annotated regions:
Protein sequence:
MAGEENFKEELRSQDASRNLNQHEVAGHPHSWSLEMLLRRLRAVHTKQDDKFANLLDAVGEFGTFQQRLVALTFIPSIMSAFFMFADHFVFTAQKPYCNTSWILAVGPHLSKAEQLNLTIPQAPNGSFLTCFMYLPVPWNLDSIIQFGLNDTDTCQDGWIYPDAKKRSLINEFDLVCGMETKKDTAQIMFMAGLPIGSLIFRLITDKMGRYPAILLSLLGLIIFGFGTAFMNSFHLYLFFRFGISQSVVGYAISSISLATEWLVGEHRAHAIILGHCFFAVGAVLLTGIAYSLPHWQLLFLVGGILVIPFISYIWILPESPRWLMMKGKVKEAKQVLCYAASVNKKTIPSNLLDELQLPRKKVTRASVLDFCKNRQLCKVTLVMSCVWFTVSYTYFTLSLRMRELGVSVHFRHVVPSIMEVPARLCCIFLLQQIGRKWSLAVTLLQAIIWCLLLLFLPEGEDGLRLKWPRCPATELKSMTILVLMLREFSLAATVTVFFLYTAELLPTVLRATGLGLVSLASVAGAILSLTIISQTPSLLPIFLCCVLAIVAFSLSSLLPETRDQPLSESLNHSSQIRNKVKDMKTKETSSDDV

Annotated regions:
phrase: TIPQAPNGSFLTCFMYLPVPWNLDSIIQFGLNDTDTCQDGWIYPDAKKRSLINEFDLVCGMETKKDTAQIMFMAGLPIGSLIFRLITDKMGRYPAILLSLLGLIIFGFGTAFMNSFHLYLFFRFGISQSVVGYAISSISLATEWLVGEHRAHAIILGHCFFAVGAVLLTGIAYSLPHWQLLFLVGGILVIPFISYIWILPESPRWLMMKGKVKEAKQVLCYAASVNKKTIPSNLLDELQLPRKKVTRASVLDFCKNRQLCKVTLVMSCVWFTVSYTYFTLSLRMRELGVSVHFRHVVPSIMEVPARLCCIFLLQQIGRKWSLAVTLLQAIIWCLLLLFLPEGEDGLRLKWPRCPATELKSMTILVLMLREFSLAATVTVFFLYTAELLPTVLRATGLGLVSLASVAGAILSLTIISQTPSLLPIFLCCVLAIVAFSLSSLLPET
type: DOMAIN
name: MFS_dom
description: Major facilitator superfamily domain
Protein sequence:
MATPHINAEMGDFADVVLMPGDPLRAKFIAETFLDDAREVNNVRGMLGFTGTYKGRKISVMGHGMGIPSCSIYAKELITEFGVKKIIRVGSCGAVREDVKLRDVVIGMGACTDSKVNRMRFKDHDYAAIADFDMVRNAVDAAKARDVSVRVGNIFSADLFYTPDPQMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALAICTVSDHIRTGAQTTSEERQTTFNEMIEIALESVLLGDNE

Annotated regions:
phrase: VVLMPGDPLRAKFIAETFLDDAREVNNVRGMLGFTGTYKGRKISVMGHGMGIPSCSIYAKELITEFGVKKIIRVGSCGAVREDVKLRDVVIGMGACTDSKVNRMRFKDHDYAAIADFDMVRNAVDAAKARDVSVRVGNIFSADLFYTPDPQMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALAICTVSDHIRTGAQTTSEERQTTFNEM
type: DOMAIN
name: Nucleoside_phosphorylase_d
description: Nucleoside phosphorylase domain

phrase: GHGMGIPSCSIYAKE
type: CONSERVED_SITE
name: Nucleoside_phosphorylase_CS
description: Nucleoside phosphorylase, conserved site
Protein sequence:
MKPLNIIFAGTPDFAAQHLQALLQSQHNVLAVYTQPDKPAGRGQTLRASAVKILAEKHHIPVYQPKSLRKVEVQENLSKLNADVMVVVAYGLILPLAVLQTFPLGCLNVHGSLLPRWRGAAPIQRAIWAGDKKTGVTIMQMNEGLDTGDMLHKVCCDITPTETSTSLYTKLANIAPKALLEVLDGLEQSLFKAEVQDESLSNYAEKLSKEEAKLDWSLSAEQLERCIRAFNPWPMSYFVTQDSQGTLQTLKVYQASVLPHQDKPCGTILAADKRGIQVATANGVLNLEQLQPAGKKPMSARDLLNSRADWFKIGQVL

Annotated regions:
phrase: GVTIMQMNEGLDTGDMLHKVCCD
type: ACTIVE_SITE
name: GART_AS
description: Phosphoribosylglycinamide formyltransferase, active site

phrase: IIFAGTPDFAAQHLQALLQSQHNVLAVYTQPDKPAGRGQTLRASAVKILAEKHHIPVYQPKSLRKVEVQENLSKLNADVMVVVAYGLILPLAVLQTFPLGCLNVHGSLLPRWRGAAPIQRAIWAGDKKTGVTIMQMNEGLDTGDMLHKVCCDITPTETSTSLYTKLANIAPKALLEV
type: DOMAIN
name: Formyl_transf_N
description: Formyl transferase, N-terminal

phrase: LNIIFAGTPDFAAQHLQALLQSQHNVLAVYTQPDKPAGRGQTLRASAVKILAEKHHIPVYQPKSLRKVEVQENLSKLNADVMVVVAYGLILPLAVLQTFPLGCLNVHGSLLPRWRGAAPIQRAIWAGDKKTGVTIMQMNEGLDTGDMLHKVCCDITPTETSTSLYTKLANIAPKALLEVLDGLEQSLFKAEVQDESLSNYAEK
type: DOMAIN
name: Met-tRNA-FMT_N
description: Methionyl-tRNA formyltransferase, N-terminal domain

phrase: KLSKEEAKLDWSLSAEQLERCIRAFNPWPMSYFVTQDSQGTLQTLKVYQASVLPHQDKPCGTILAADKRGIQVATANGVLNLEQLQPAGKKPMSARDLLNS
type: DOMAIN
name: Formyl_trans_C
description: Formyl transferase, C-terminal

phrase: EEAKLDWSLSAEQLERCIRAFNPWPMSYFVTQDSQGTLQTLKVYQASVLPHQDKPCGTILAADKRGIQVATANGVLNLEQLQPAGKKPMS
type: DOMAIN
name: Met-tRNA-FMT_C
description: Methionyl-tRNA formyltransferase, C-terminal domain
Protein sequence:
MKNLVEELKWRGLFHDMMPGTEEQLTKESTTAYIGFDPTADSLHIGSMVQIILLVHLKNFGHKPIALIGGATGMIGDPSGKSDERNLLDEATLNKNVAGIKAVLSSFLDFNTTNANAPILVNNYDWMKDFSFIDFARDIGKRITVNYMMSKDSVKKRLGAEGEGMSFTEFTYQLIQGYDFQYLYKNHNCLLQMGGSDQWGNITTGTELVRRMGGEGAKAYALTTPLITKADGSKFGKSEGGNVWLTADKTSVYKFYQFWLNTSDDDAEKYIKIFTFLDKNTIDGLIEEHKTAPHLRVLQRKLTEEITILVHGKEELEKAIKASNILFGNSTSNDLKGLDAATFLEIFDGVPQAEISKTDIEAGINIVEVLNEKSGFLKSNGEARRALSANSIAVNKEKVTEEFTLTTKDMINNQFVLLQSGKKNYFVLNVK

Annotated regions:
phrase: EIFDGVPQAEISKTDIEAGINIVEVLNEKSGFLKSNGEARRALSANSIAVNKEKVTEEFTLTTKDMINNQFVLLQSGKKNYF
type: DOMAIN
name: SYY-like_C
description: Tyrosine--tRNA ligase SYY-like, C-terminal domain
Protein sequence:
QASIFSRFFRMFSFIFPFVNVIKLIIASVTSLVCLAFSCVALGGSAVALIVSTPLFIMFSPILVPATIATTLLASGLMAGTTLGLTGIGLIMGLVRTAGGVSLLQSPLRKIIVNRIKARLGGGGGGSRLARLKKILGLLNKLRGMGAGGAAAPAAEPAPAAEAAPAAEAAPAAAPAAAPAAAP

Annotated regions:
Protein sequence:
MLHGDITSSNDTIGVAVVNYKMPRLHTKAEVLDNARKIADMIVGMKTGLPGMDLVIFPEYSTHGIMYDSKEMYETASTVPGDETEIFAEACRKAKVWGVFSLTGERHEEHPKKAPYNTLILMNDKGEIVQKYRKIMPWVPIEGWYPGNCTYVSEGPKGLKISLIICDDGNYPEIWRDCAMKGAELIVRCQGYMYPAKDQQVIMAKAMAWANNVYVAVANASGFDGVYSYFGHSAIIGFDGRTLGECGEEDYGVQYAQLSKSLIRDARKNGQSQNHLFKLVHRGYTGLINSGDGDRGVAACPYDFYAKWVADPEGTREMVESFTRSTVGTEECPIEGIPNKKVAHR

Annotated regions:
phrase: IGVAVVNYKMPRLHTKAEVLDNARKIADMIVGMKTGLPGMDLVIFPEYSTHGIMYDSKEMYETASTVPGDETEIFAEACRKAKVWGVFSLTGERHEEHPKKAPYNTLILMNDKGEIVQKYRKIMPWVPIEGWYPGNCTYVSEGPKGLKISLIICDDGNYPEIWRDCAMKGAELIVRCQGYMYPAKDQQVIMAKAMAWANNVYVAVANASGFDGVYSYFGHSAIIGFDGRTLGECGEEDYGVQYAQLS
type: DOMAIN
name: C-N_Hydrolase
description: Carbon-nitrogen hydrolase

phrase: VAVVNYKMPRLHTKAEVLDNARKIADMIVGMKTGLPGMDLVIFPEYSTHGIMYDSKEMYETASTVPGDETEIFAEACRKAKVWGVFSLTGERHEEHPKKAPYNTLILMNDKGEIVQKYRKIMPWVPIEGWYPGNCTYVSEGPKGLKISLIICDDGNYPEIWRDCAMKGAELIVRCQGYMYPAKDQQVIMAKAMAWANNVYVAVANASGFDGVYSYFGHSAIIGFDGRTLGECGEEDYGVQYAQLSKSLIRDAR
type: DOMAIN
name: C-N_Hydrolase
description: Carbon-nitrogen hydrolase
Protein sequence:
MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDYAAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNPLDAMVWALQKFSGLPAHKVVGMAGVLDSARFRYFLSEEFNVSVEDVTAFVLGGHGDSMVPLARYSTVAGIPLPDLVKMGWTSQDKLDKIIQRTRDGGAEIVGLLKTGSAFYAPAASAIQMAESYLKDKKRVLPVAAQLSGQYGVKDMYVGVPTVIGANGVERIIEIDLDKDEKAQFDKSVASVAGLCEACIGIAPSLK

Annotated regions:
phrase: LDSARFRYFLSEEFNVSVEDVTAFVLGGHGDSMVPLARYSTVAGIPLPDLVKMGWTSQDKLDKIIQRTRDGGAEIVGLLKTGSAFYAPAASAIQMAESYLKDKKRVLPVAAQLSGQYGVKDMYVGVPTVIGANGVERIIEIDLDKDEKAQFDKSV
type: DOMAIN
name: Lactate/malate_DH_C
description: Lactate/malate dehydrogenase, C-terminal

phrase: KIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDYAAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITNPLDAMVWALQKFSGLPAHKVV
type: DOMAIN
name: Lactate/malate_DH_N
description: Lactate/malate dehydrogenase, N-terminal
Protein sequence:
MKKIILVAGGTGGHFFPAVALGEELIKRGYEVHFITDLRCKQYIKQDMKVIFHILDLKRSGNIFLFLPRLSIAVLKAIKLLYNMKPSVTVGFGGYPVIAPMFAAIFLRVPIIIHEQNSYLGKVNKFFASFAKKIAISYEKIKNLPEFAKSKIVVTGGVVRENIRELKVIEMSSRGLTTGSKKSLIKALDSVVKPRNDKLFTIFIFGGSQGAKLFSELIPASIQILMQKQPSLELNIIQQAALDDQVKIKDIYSKLNITYEFAEFFDNMALQYKEADLVISRAGASTIEELTYIGLPAIFIPLPSAADNHQYYNAQLLEDEKTGWCLEQNNISAGKLADKILDLISNPKILEDASQNLLKRRKEGHKLLSNLIEEVI

Annotated regions:
phrase: MSSRGLTTGSKKSLIKALDSVVKPRN
type: DOMAIN
name: RPE4
description: Rickettsia palindromic element RPE4

phrase: TIFIFGGSQGAKLFSELIPASIQILMQKQPSLELNIIQQAALDDQVKIKDIYSKLNITYEFAEFFDNMALQYKEADLVISRAGASTIEELTYIGLPAIFIPLPSAADNHQYYNAQLLEDEKTGWCLEQNNISAGKLADKILDLISNPKILEDASQNLLKRRKEGH
type: DOMAIN
name: Glyco_trans_28_C
description: Glycosyl transferase, family 28, C-terminal

phrase: IILVAGGTGGHFFPAVALGEELIKRGYEVHFITDLRCKQYIKQDMKVIFHILDLKRSGNIFLFLPRLSIAVLKAIKLLYNMKPSVTVGFGGYPVIAPMFAAIFLRVPIIIHEQNSYLGKVNKFFASFAKKIA
type: DOMAIN
name: GlycoTrans_28_N
description: Glycosyltransferase family 28, N-terminal domain
Protein sequence:
MNKAVIAIHGGAGAIARAQMSHEQELRYIQALSEIVESGQKMLEAGDSALDVVTEAVRLLEACPLFNAGIGAVYTRDGTHELDACVMDGNTLKAGAVAGVSHVRHPVLAARLVMERSPHVLMVGEGAENFAFSQGMARVSPDIFSTPARYEQLLAARAAGEMALDHSGAPLDETKKMGTVGAVARDKFGNLAAATSTGGMTNKLPGRVGDSPLVGAGCYANNASVAVSCTGTGEVFIRTLAAYDIAALMEYGGLSLADACERVVMEKLPALGGSGGLIAVDHEGNVALPFNSEGMYRAWGYAGDTPTTGIYRE

Annotated regions: