nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MDLSTVLTAIPFYRQDKEGNPTITSIENDHRLVSDGSIFICIKGYTFDGHNAAKEAVEKGAVAIIAEQPVDVSVPVIYVRSTKRAMAQLAAHFYGHPTESFHLIGITGTNGKTTTSHLIDEILRASGETTGLIGTMYMKIGDETVETKNTTPESLTLQKTFSKMKTAGVSAAVMEVSSHALQEGRTNGTQFNVAVFTNLTQDHLDFHRTMDEYRTAKGLLFSRLGSSFHSSTPTFAILNADDKASQVYEAMTAAHVVTYGLEQDADIQAKEIQLTSAGTAFTIHYPGGMIGIKSKLAGLFNVYNILAAFAAGFVSNVAPETMKHALERVVGVAGRFEMVSNDKGVSVIVDYAHTPDSLVNVLETVRPLTKGRVIAIVGCGGDRDKTKRPLMAQAACEHADEAIFTSDNPRSEDPAAILADMESGVVGQEYTIIEDRKEAIHRAIKFAQPGDSVVIAGKGHETYQIIGRTVLHFDDREVAKEALADKKGGFA

Annotated regions:
phrase: ITGTNGKTTTSHLIDEILRASGETTGLIGTMYMKIGDETVETKNTTPESLTLQKTFSKMKTAGVSAAVMEVSSHALQEGRTNGTQFNVAVFTNLTQDHLDFHRTMDEYRTAKGLLFSRLGSSFHSSTPTFAILNADDKASQVYEAMTAAHVVTYGLEQDADIQAKEIQLTSAGTAFTIHYPGGMIGIKSKLAGLFNVYNILAAFA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRFEMVSNDKGVSVIVDYAHTPDSLVNVLETVRPLTKGRVIAIVGCGGDRDKTKRPLMAQAACEHADEAIFTSDNPRSEDPAAILADMESGVVGQEYTIIEDRKEAIHRAIKFAQPGDSVVIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: ITSIENDHRLVSDGSIFICIKGYTFDGHNAAKEAVEKGAVAIIAEQPVDVSVPVIYVRSTKRAMAQLAAHF
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain
Protein sequence:
MSRAMVAIVGRPNVGKSTLFNRILKRRISIVEDIPGVTRDRIYGNAEWLNRKFILVDTGGLDPDPKDVIFSKVKLQVEAAIEAADLILFVVDAREGLVPEDEEIANMLRKTKKEVILVCNKVDSFKEMPASFYDFFKLGLGEPIPISASNGLGIGELLDEVIKRLPENDVEYEEETIKIAVIGRPNVGKSSLVNRILGEERVIVSDIPGTTRDAIDTPFTKDGRNYILIDTAGIRRKSRISESIERYSVLRALAAIERADICLLMIDATEGPTEQDTKIAGYAFENGKGIIILVNKWDIVEKDSNTYKEYTEMIREKLAFISFAPILFISAKTGQRIHKVLETVDKVWEEYNKRITTGLLNNVLNEAMLMFPPPSSKGRPIKIYYATQVGTKPPTFVIFVNEPELLHFSYVRFLENTIRQNFGFEGVPIVISTKKRGED

Annotated regions:
phrase: RITTGLLNNVLNEAMLMFPPPSSKGRPIKIYYATQVGTKPPTFVIFVNEPELLHFSYVRFLENTIRQNFGFEGVPIVIS
type: DOMAIN
name: KH_dom-like
description: GTPase Der, C-terminal KH-domain-like

phrase: ETIKIAVIGRPNVGKSSLVNRILGEERVIVSDIPGTTRDAIDTPFTKDGRNYILIDTAGIRRKSRISESIERYSVLRALAAIERADICLLMIDATEGPTEQDTKIAGYAFENGKGIIILVNKWDIVEKDSNTYKEYTEMIREKLAFISFAPILFISAK
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: SRAMVAIVGRPNVGKSTLFNRILKRRISIVEDIPGVTRDRIYGNAEWLNRKFILVDTGGLDPDPKDVIFSKVKLQVEAAIEAADLILFVVDAREGLVPEDEEIANMLRKTKKEVILVCNKVDSFKEMPASFYDFFKLGLGEPI
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: ETIKIAVIGRPNVGKSSLVNRILGEERVIVSDIPGTTRDAIDTPFTKDGRNYILIDTAGIRRKSRISESIERYSVLRALAAIERADICLLMIDATEGPTEQDTKIAGYAFENGKGIIILVNKWDIVEKDSNTYKEYTEMIREKLAFISFAPILFISAKTGQRIHKVLET
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: SRAMVAIVGRPNVGKSTLFNRILKRRISIVEDIPGVTRDRIYGNAEWLNRKFILVDTGGLDPDPKDVIFSKVKLQVEAAIEAADLILFVVDAREGLVPEDEEIANMLRKTKKEVILVCNKVDSFKEMPASFYDFFKLGLGEPIPISASNGLGIGELLD
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: AMVAIVGRPNVGKSTLFNRILKRRISIVEDIPGVTRDRIYGNAEWLNRKFILVDTGGLDPDPKDVIFSKVKLQVEAAIEAADLILFVVDAREGLVPEDEEIANMLRKTKKEVILVCNKVDSFKEMPASFYDFFKLGLGEPIPISASNGLGIGELLDEVIKRLPEN
type: DOMAIN
name: G_ENGA
description: EngA-type guanine nucleotide-binding (G) domain

phrase: IKIAVIGRPNVGKSSLVNRILGEERVIVSDIPGTTRDAIDTPFTKDGRNYILIDTAGIRRKSRISESIERYSVLRALAAIERADICLLMIDATEGPTEQDTKIAGYAFENGKGIIILVNKWDIVEKDSNTYKEYTEMIREKLAFISFAPILFISAKTGQRIHKVLETVDKVWEEY
type: DOMAIN
name: G_ENGA
description: EngA-type guanine nucleotide-binding (G) domain

phrase: VAIVGRPNVGKSTLFNRILKRRISIVEDIPGVTRDRIYGNAEWLNRKFILVDTGGLDPDPKDVIFSKVKLQVEAAIEAADLILFVVDAREGLVPEDEEIANMLRKTKKEVILVCN
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: KIAVIGRPNVGKSSLVNRILGEERVIVSDIPGTTRDAIDTPFTKDGRNYILIDTAGIRRKSRISESIERYSVLRALAAIERADICLLMIDATEGPTEQDTKIAGYAFENGKGIIILVN
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: VAIVGRPNVGKSTLFNRILK
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: KLQVEAAIEAADLILFVV
type: DOMAIN
name: GTP-bd
description: GTP binding domain
Protein sequence:
MAHKKAGGSSRNGRDSEAKRLGVKVYGSELIPAGSIIVRQRGTKFHAGENVGQGKDHTLFAKVDGYVEFTVKGAQQRKTVNVVPYTGVDGE

Annotated regions:
phrase: GSIIVRQRGTKFHA
type: CONSERVED_SITE
name: Ribosomal_bL27_CS
description: Large ribosomal subunit protein bL27, conserved site
Protein sequence:
MSKPLRGRHQARKRAVDLLFEAEARGLSPAEVVDVRTGLADTNPEVAPLQPYTAAVARGVGDHAAHIDDLISSHLQGWTLDRLPAVDRAILRVAVWELLYADDVPEPVAVDEAVQLAKELSTDDSPGFVNGVLGQVMLVTPQIRAAARAVRGPRDT

Annotated regions:
phrase: HQARKRAVDLLFEAEARGLSPAEVVDVRTGLADTNPEVAPLQPYTAAVARGVGDHAAHIDDLISSHLQGWTLDRLPAVDRAILRVAVWELLYADDVPEPVAVDEAVQLAKELSTDDSPGFVNGVLGQV
type: DOMAIN
name: NusB_RsmB_TIM44
description: NusB/RsmB/TIM44
Protein sequence:
MITSELSVLQDSTNESAVMHTDMTAVSADLSTELVEDLEVKGKRKRGRPGRPPSAIKKPRKTPGDRSRAEPGSRGRGRANGHPQQNGEGDPVTLFEVVKMGKSAMQAVVDDWIESYKQDRDIALLDLINFFIQCSGCKGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPHWKKFRCNFCEFISVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSIHQDNTQRQYETERNKIINKRANERLELLLQKRKELQENQDEIENMMNSIFKGIFVHRYRDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQSLYTNRELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILHGSEEALSNEDCENVYHLVYSAHRPVAVAAGEFLHKKLFSRHDPQAEEALAKRRGRSSPNGNLVKMLVLFFLESELHEHAAYLVDSLWESSQELLKDWECMTELLVEEPMQGEEVMSERQESALVELMVCTIRQAAEAHPPVGRGTGKRVLTAKERKTQLDDKTKLTEHFIVALPVLLSKYSADAEKVANLLQIPQYFDLELYSTGRMEKHLDSLLKQIRFVVEKHIESDVLEACSKTYSILCSEEYTIQNRVEIAHSQLIDELADRFSHAVEELLQEAEEADEDEIYNVMASLKRLTCFHNAHDLTKWDFFGNCYRLLRAGIEHEGMMEQIVVQALQCSHYSILWQLVKITEGNPSKEEMLALRKTVKSFLAVCQQCLSSMTTLVKEQAFMLLCDLLMIFSHQLTTGGRENLLLLVFNPDVGLQSELLSFVMDHVFIDQDDENQSMEGDEEDEANKIEALHKRRNLLASFCKLIIYDIVDMNAAADIFKHYMKYYNDYGDIIKETLSKTRQMDKIQCAKTLILSLQQLFNELVQEQGPNLDRTSAHVSGIKELARRFALTFGLDQIKTREAVATLHKDGIEFAFKYQNPKGPEYPPLNLAFLEVLSEFSSKLLRQDKKTVHSYLEKFLTDLMMERREDVWLPLISYRNSLVTGGDEDRLSVNSGGSNSKGSSVRSKKGRPPLHKKRVIEEESIDNSWVTRNDTIQTPGALTTPQLTSTVLRENPRQIPEQIPEQESEPSSEPDFLHSPQMQMSWLGQQKLEDLNRKDRTSMSYMKVRSGVRHAVRGLMEDDAEPIFEDVMMSSRGQLEDMNEEFEDTMVIDLPPSRNRRERAELRPDFFDSAAIIEDDSGFGMPMF

Annotated regions:
phrase: YLVDSLWESSQELLKDWECMTELLVEEPMQGEEVMSERQESALVELMVCTIRQAAEAHPPVGRGTGKRVLTAKERKTQLDDKTKLTEHFIVALPVLLSKYSADAEKVANLLQIPQYFDLELYSTGRMEKHLDSLLKQIRFVVEKHIESDVLEACSKTYSILCSEEYTIQNRVEIAHSQLIDELADRFSHAVEELLQEAEEADEDEIYNVMASLKRLTCFHNAHDLTKWDFFGNCYRLLRAGIEHEGMMEQIVVQALQCSHYSIL
type: DOMAIN
name: HEAT_SCC3-SA
description: Cohesin subunit SCC3/SA, HEAT-repeats domain

phrase: RDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQSLYTNRELFPKLELFTNRF
type: DOMAIN
name: SCD
description: Stromalin conservative domain

phrase: DYPLTMPGPHWKKFRCNFCEFISVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSIHQDNTQRQYETERNKIINKRANERL
type: DOMAIN
name: STAG
description: STAG

phrase: FVHRYRDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQSLYTNRELFPKLELFTNRFKDRIVS
type: DOMAIN
name: SCD
description: Stromalin conservative domain
Protein sequence:
MLIAGPTASGKSALALRLAQMHGGVVINTDSMQMYRDLRIITARPTPEEEALVPHRLYGTVDAAVNFSAGAFVEAAAGALAEARASGLLPIFIGGTGLYFKALTRGLSLVPPVPAEIRDAVRLRLDRDGVAALHAELARHDPAAAERLAPADRSRIARALEVVLATGRPLADWHGEASPPLLPPDGVTAVFLAPEREALYARIDARFAAMLRAGALDEVAALAERRLDPLLPAMKAHGVPALIRHLRGEISLDEAAVIGAADTRHYAKRQFTWFRHQLPEFRWVTPEEAGRVVDQEFQGNPSCTTSTASS

Annotated regions:
Protein sequence:
MNRTEAREWVVKMLYQYDVSKLPLEKIFENFYEEHDPGEQKEYIEGTVRGTVEHLEEIDREIEKYSKDWPLYRMPRIDLAILRCSMYEMLYGNIPVSISINEAVEIAKKYSTDDSPSFINGLLGAFVREKGLEEGEANDN

Annotated regions:
phrase: EAREWVVKMLYQYDVSKLPLEKIFENFYEEHDPGEQKEYIEGTVRGTVEHLEEIDREIEKYSKDWPLYRMPRIDLAILRCSMYEMLYGNIPVSISINEAVEIAKKYSTDDSPSFINGLLGAFV
type: DOMAIN
name: NusB_RsmB_TIM44
description: NusB/RsmB/TIM44
Protein sequence:
MADQLIRATAAEDGIRAVGVITTRLTEEARQRHKLSYVATAALGRTMAAGLLLASSMKQPQARVNIRIKGDGPLEGLFVDAGCDGTVRGYVYNPAIELPPNAKGKLDVGGAVGSQGYLYVIRDLGYGYPYSSTVELVSGEIAEDITHYLVTSEQTPSALVLGVFVTEAGVTAAGGVLIQVLPKAAQDEALVEKLESRISALSGFTPLLQRGLSLSEIFEQLLGDMGLTILPQRQLVRFHCRCSFDRMLGALKILGSDELQDMIDRDNGAEATCHFCGEVYQASSEQLAELIDELKAEAGG

Annotated regions:
Protein sequence:
MALSREEVAARYGAALFGYAQDNKVLDNVYDEMMELKKAVIATPQVISVLSDPILNSKDKKDFLTAIEKNFSEEVQGFLNLLLEYDRFAYLVDIIDQFAVLYDDKNKIASGTATTAVKLDDDQLKRLGDGFAKKYNLNTVRLENKVDPSILGGVILQVKDRVIDGSVKNKLKKIRAQIIDEN

Annotated regions:
Protein sequence:
MKVKGIRKNYQQFWKWGTLLLGILMICSAAGLWVTVYYGVPVWKEATTTLFCASDAKAYDTEAHNVWATHACVPTDPNPQEVVLGNVTEDFNMWENNMVEQMQEDVISLWDQSLKPCVKLTPLCVILNCTDLNNSTGLNNTHTGEMKNCSFNITSPLRDKMQKEYALFYKLDIVPIDDDRANNTSNNTSYRLISCNTSVITQACPKVSFTPIPIHYCAPAGFALIKCNNKTFDGRGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSKNFTDNAKNIIVQLNKPVQINCTRPNNNTRKSIHIGPGRAFYATGEIIGNIRQAHCNISRRNWTNTLQQIVGKLREKFENKTIVFNQSSGGDPEIVMHSFNCGGEFFYCNTSALFNSTWNNTLTNTTGSNDTDTITLPCRIKQIINMWQEVGKAMYAPPISGHINCVSNITGLILTRDGGNSSNETFRPAGGDMRDNWRSELYKYKVVKIKPLGIAPTEAKRRVVQREKRAVGMGALFLGFLGAAGSTMGAASMTLTVQARQLLSGIVQQQNNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICTTAVPWNNSWSNKSLKTIWDNMTWMEWEKEIDNYTDLIYNLLEEAQNQQEKNEQELLELDKWASLWNWFDITKWLWYIKIFIMIVGGLIGLRIVFAVLSIVNRVRQGYSPLPFQTHLPVPRGPDRPEGIEDEGGESGRNTSGQSVNGFLTIIWVDLRSLCLFSYHRLRDLLL

Annotated regions:
phrase: GEMKNCSFNITSPLRDKMQKEYALFYKLDIVPIDDDRANNTSNNTSYRLISCNTSVITQACPKVSFTPIPIHYCAPAGFALIKCNNKTFDGRGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSKNFTDNAKNIIVQLNKPVQINCTRPNNNTRKSIHIGPGRAFYATGEIIGNIRQAHCNISRRNWTNTLQQIVGKLREKFENKTIVFNQSSGGDPEIVMHSFNCGGEFFYCNTSALFNSTWNNTLTNTTGSNDTDTITLPCRIKQIINMWQEVGKAMYAPPISGHINCVSNITGLILTRDGGNSSNETFRPAGGDMRDNWRSELYKYKVVKIKPLGIAPTEAKRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: LWVTVYYGVPVWKEATTTLFCASDAKAYDTEAHNVWATHACVPTDPNPQEVVLGNVTEDFNMWENNMVEQMQEDVISLWDQSLKPCVKLTPLCVILNCTDLNNSTGLNNT
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: MGAASMTLTVQARQLLSGIVQQQNNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICTTAVPWNNSWSNKSLKTIWDNMTWMEWEKEIDNYTDLIYNLLEEAQNQQEKNEQELLELDKWASLWNWFDITKWLWYIKIFIMIVGGLIGLRIVFAVLSIVNRVRQGYSPLPF
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: VQARQLLSGIVQQQNNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICTTAVPWNNSWSNKSLKTIWDNMTWMEWEKEIDNYTDLIYNLLEEAQNQQEKNEQELLELD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MTDTPKKISDAITQGPARAAARAMLRATGMEDADFDKPMIGVINTWTTVTPCNMHLADLAHPVRDAVREAGGHPVDFNTVVVSDGISMGSEGMRASLISREVIADSIELATRGHCLDGVVILVGCDKTIPAAAMALARMDVPGCILYGGTIMPGRLGDKDLSIQDVFEAVGAHAAGTLDDQGLKDVEKAACPGAGACGGQFTANTMATILSVMGFSPMGVNDIPAPHPDKPAAAARCGTLAVELAKAGIRPRQYVSQASLRNAAIAASASGGSTNAILHLAAIAAEAGEPFSIDIFDEVSATAPVITDLKPGGRFLAHHMFLAGGTRLFTQRLAAAGLLTDTPTVTGRSLFEEAADAVESKNQRVIYSVDNPVKPDGGFRILYGDLAPEGAALKLSGHSRTAFSGPARVFESEEAAFAEIEANKIKAGDVVIIRNEGPKGGPGMREMLGVTAALVGQGLSEDVALITDGRFSGASKGFVIGHVSPEAAAGGPIGLIEEGDMIRIDVAARRIDVEADLSARRANWVRPEPKSVGGVFAKYAALVSSASRGAVTIPTEAPAPAAPSSSDTQASKQEINA

Annotated regions:
phrase: ALITDGRFSGA
type: CONSERVED_SITE
name: DiOHA_6PGluconate_deHydtase_CS
description: Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site

phrase: KPMIGVINTWTTVTPCNMHLADLAHPVRDAVREAGGHPVDFNTVVVSDGISMGSEGMRASLISREVIADSIELATRGHCLDGVVILVGCDKTIPAAAMALARMDVPGCILYGGTIMPGRLGDKDLSIQDVFEAVGAHAAGTLDDQGLKDVEKAACPGAGACGGQFTANTMATILSVMGFSPMGVNDIPAPHPDKPAAAARCGTLAVELAKAGIRPRQYVSQASLRNAAIAASASGGSTNAILHLAAIAAEAGEPFSIDIFDEVSATAPVITDLKPGGRFLAHHMFLAGGTRLFTQRLAAAGLLTDTPTVTGRSLF
type: DOMAIN
name: ILV_EDD_N
description: Dihydroxy-acid/6-phosphogluconate dehydratase, N-terminal

phrase: CDKTIPAAAM
type: CONSERVED_SITE
name: DiOHA_6PGluconate_deHydtase_CS
description: Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site

phrase: VIYSVDNPVKPDGGFRILYGDLAPEGAALKLSGHSRTAFSGPARVFESEEAAFAEIEANKIKAGDVVIIRNEGPKGGPGMREMLGVTAALVGQGLSEDVALITDGRFSGASKGFVIGHVSPEAAAGGPIGLIEEGDMIRIDVAARRIDVEADLSARRANWVRPEPKSVGGVFAKYAALVSSASRG
type: DOMAIN
name: ILV_EDD_C
description: Dihydroxy-acid/6-phosphogluconate dehydratase, C-terminal
Protein sequence:
MRVMGIKKNYQNLWEWGMWKWGIMLLGMLMICSAKEDWWVTVYYGVPVWKEANTTLFCASDAKAQDTEVHNVWATHACVPTDPSPQEIMMGNVTENFNMWKNNMVDQMHEDIISLWDQSLKPCVKLTPLCVTMDCTDLTNTTNSNTTGTNTTNTNTSIDSRMVGEIKNCSFNISTSIRDRIKKEYALFYKLDIVKIANDNSTKFRLISCNTSEITQACPKVSFEPIPIHYCAPAGFAILKCNNETFNGTGPCTNVSTVQCTHGIKPVVSTQLLLNGSLAEKEVVIKSANLSDNTKNIIVQLNEPVSITCTRPNNNTRRSIAIGPGRARFATRKIIGNIRQAHCNISKADWNKTLAQIANKLGEKFNRTIIFNQSSGGDPEIVMHTFNCGGEFFYCNSSGLFNSTWVYNGDWQRNDSSETRGSNDTRTNITLPCRIKQIINMWQQVGKAMYAPPISGLIECTSNITGIILTRDGGVDNTTNGSETFRPGGGDMRDNWRSELYKYKVVKIEPLGLAPTRAKRRVVQREKRGIGIGAMVLGFLGAAGSTMGAASLTLTVQARQLLSGIVQQQNNLLQAIEAQQRLLQLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKIICTTAVPWNASWHSSRRKSNVTLNYNDIWDNMTWMQWEKEIDEHTDTIYRLLEESQNQQEKNEQDLLELDKWSNLWTWFDITNWLWYIKIFIMIVGGLVGLRIVFMVLSIVNRVRQGYSPLSFQTHHPAPRGPDRPEGIEEEGGGRDRD

Annotated regions:
phrase: MGAASLTLTVQARQLLSGIVQQQNNLLQAIEAQQRLLQLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKIICTTAVPWNASWHSSRRKSNVTLNYNDIWDNMTWMQWEKEIDEHTDTIYRLLEESQNQQEKNEQDLLELDKWSNLWTWFDITNWLWYIKIFIMIVGGLVGLRIVFMVLSIVNRVRQGYSPLSFQ
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: WVTVYYGVPVWKEANTTLFCASDAKAQDTEVHNVWATHACVPTDPSPQEIMMGNVTENFNMWKNNMVDQMHEDIISLWDQSLKPCVKLTPLCVTMDCTDLTNTTNSNTTGTNTTNTNTSIDSRMVGEIKNCSFNISTSIRDRIKKEYALFYKLDIVKIANDNSTKFRLISCNTSEITQACPKVSFEPIPIHYCAPAGFAILKCNNETFNGTGPCTNVSTVQCTHGIKPVVSTQLLLNGSLAEKEVVIKSANLSDNTKNIIVQLNEPVSITCTRPNNNTRRSIAIGPGRARFATRKIIGNIRQAHCNISKADWNKTLAQIANKLGEKFNRTIIFNQSSGGDPEIVMHTFNCGGEFFYCNSSGLFNSTWVYNGDWQRNDSSETRGSNDTRTNITLPCRIKQIINMWQQVGKAMYAPPISGLIECTSNITGIILTRDGGVDNTTNGSETFRPGGGDMRDNWRSELYKYKVVKIEPLGLAPTRAKRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: VQARQLLSGIVQQQNNLLQAIEAQQRLLQLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKIICTTAVPWNASWHSSRRKSNVTLNYNDIWDNMTWMQWEKEIDEHTDTIYRLLEESQNQQEKNEQDLLELD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MVQQYTRLNVADNTGAKKIMCINVLGGSHKIQAKVGDVIVAAVKKSSPDAQAKSGTVVKAVVVRITKPYARPDGSYIKFDDNAAVILNDKMEPKGTRIFGPVARELRDKKFTKILSLAPEVL

Annotated regions:
phrase: AVVVRITKPYARPDGSYIKFDDNAAV
type: CONSERVED_SITE
name: Ribosomal_uL14_CS
description: Large ribosomal subunit protein uL14, conserved site
Protein sequence:
MIGTIAVPIQPTCMLMNGNSLGAPPNKNVAIIAKNQMATQQPVVKSKAYALRQISAMLISEHDTTIKNMDKALNENLQIQRQLLIKEHSQIIKDKNGTLRMRQITYQQAEARQLQIQKEQQENQDFLDGKYDDHEYIGQVRGIIASHKGEQVSFKTAHYKRTVKSPVIHEKRRKQITVQQVLAELLPLTRTRAKPMQFIGRKRDKVDVTYVHRWDSIIPKIRLPHEDGRYMRREIRSKVMDEMLASLCKFAKYGKLYDADITSGDSGLIFDQRSSIAKCNTHLPYFVVRGRRFGKLVNAFEDVDDIFEIQHYTQIPEKQFFAGWKRVFDRMIPAIEDHECSVDFNNEACGEVAALFSQTIFPVKKLSCIKCRNHLGNMSWEEFKQFILTHLGCCNEVWEAQQKKPEIKLVKRIVQQVTCENLNLETSMEIVRLTQNYTSTHMQQIQDINKALMKGPSATQAELSIASKQLLTMTQWWKNHMTLTDEDALVAFRNKRASKALLNPSLLCDNQLDKNGNFVWGERGKHSKRFFANFFEEIIPSEGYERYLVRKNPNGSRELAIGSLVVPLDFERARVALQGKSIKREPVTLACISRQDGSFVYPCCCVTQDDGKAFYSDLKSPTKRHLVVGTAGEPKYIDLPATETDRMYIAKEGYCYLNIFLAMLVNVNEDEAKDFTKMVRDIIVPKLGKWPTMMDVATAVYILTVFHPETRSAELPRILVDHKCQTMHVIDSFGSLTVGYHVLKAGTVNQLIQFASNDLSGEMKFYRV

Annotated regions:
phrase: ENLQIQRQLLIKEHSQIIKDKNGTLRMRQITYQQAEARQLQIQKEQQENQDFLDGKYDDHEYIGQVRGIIASHKGEQVSFKTAHYKRTVKSPVIHEKRRKQITVQQVLAELLPLTRTRAKPMQFIGRKRDKVDVTYVHRWDSIIPKIRLPHEDGRYMRREIRSKVMDEMLASLCKFAKYGKLYDADITSGDSGLIFDQRSSIAKCNTHLPYFVVRGRRFGKLVNAFEDVDDIFEIQ
type: DOMAIN
name: Pept_S30_P1_potyvir
description: Peptidase S30, polyprotein P1, potyvirus

phrase: MYIAKEGYCYLNIFLAMLVNVNEDEAKDFTKMVRDIIVPKLGKWPTMMDVATAVYILTVFHPETRSAELPRILVDHKCQTMHVIDSFGSLTVGYHVLKAGTVNQLIQFASNDLSGEMKFYR
type: DOMAIN
name: HC_PRO_CPD_dom
description: Helper-component proteinase (HC-Pro) cysteine protease (CPD) domain

phrase: RRKQITVQQVLAELLPLTRTRAKPMQFIGRKRDKVDVTYVHRWDSIIPKIRLPHEDGRYMRREIRSKVMDEMLASLCKFAKYGKLYDADITSGDSGLIFDQRSSIAKCNTHLPYFVVRGRRFGKLVNAFEDVDDIFEIQH
type: DOMAIN
name: Pept_S30_P1_potyvir
description: Peptidase S30, polyprotein P1, potyvirus
Protein sequence:
MYDIKWIRDNSALFDQGRERRGLPKLSAELLALDDARRAAIAESQAAQERRNAASKEIGAAMKAKDNARAEALKAEMAELKAVSPALEEAERLAIAALDRALAEIPNLPLEDVPFGRDENDNPELRVVGEKPVFSFVPKEHFDIGEGLGLMDFEAAAKLSGARFVVNKGPLARLERALGQFMLDLHTGEHGYTEVNPPILARDDALFGTAQLPKLEEDMFAAHAGRVPQEAAGDLYWLIPTSEVVLTNLVRETILDEKQLPLRFTACTPCFRAEAGSAGRDTRGMIRQHQFTKTELVSITTPEEALVEHERMLTCAEEVLKRLGLAYRVVTLCTGDMGFASQKTYDIEVWLPGQGRYREISSCSVCGDFQARRMNARYRPEGGKTTRFVHTLNGSGVAVGRALVAVLENYQREDGGVNVPRALLPYMGGITTITRG

Annotated regions:
phrase: DNPELRVVGEKPVFSFVPKEHFDIGEGLGLMDFEAAAKLSGARFVVNKGPLARLERALGQFMLDLHTGEHGYTEVNPPILARDDALFGTAQLPKLEEDMFAAHAGRVPQEAAGDLYWLIPTSEVVLTNLVRETILDEKQLPLRFTACTPCFRAEAGSAGRDTRGMIRQHQFTKTELVSITTPEEALVEHERMLTCAEEVLKRLGLAYRVVTLCTGDMGFASQKTYDIEVWLPGQGRYREISSCSVCGDFQARRMNARYRPEGGKTTRFVHTLNGSGVAVGRALVAVLENYQREDGGVNVPRALLPY
type: DOMAIN
name: SerRS_core
description: Serine-tRNA ligase catalytic core domain

phrase: MYDIKWIRDNSALFDQGRERRGLPKLSAELLALDDARRAAIAESQAAQERRNAASKEIGAAMKAKDNARAEALKAEMAELKAVSPALEEAERLAIAALDRALAEIPNL
type: DOMAIN
name: Ser-tRNA-synth_1_N
description: Serine-tRNA synthetase, type1, N-terminal

phrase: GDLYWLIPTSEVVLTNLVRETILDEKQLPLRFTACTPCFRAEAGSAGRDTRGMIRQHQFTKTELVSITTPEEALVEHERMLTCAEEVLKRLGLAYRVVTLCTGDMGFASQKTYDIEVWLPGQGRYREISSCSVCGDFQARRMNARYRPEGGKTTRFVHTLNGSGVAVGRALVAVLEN
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: RLERALGQFMLDLHTGEHGYTEVNPPILARDDALFGTAQLPKLEEDMFAAHAGRVPQEAAGDLYWLIPTSEVVLTNLVRETILDEKQLPLRFTACTPCFRAEAGSAGRDTRGMIRQHQFTKTELVSITTPEEALVEHERMLTCAEEVLKRLGLAYRVVTLCTGDMGFASQKTYDIEVWLPGQGRYREISSCSVCGDFQARRMNARYRPEGGKTTRFVHTLNGSGVAVGRALVAVLENYQREDGGVNVPRALL
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II
Protein sequence:
MMQESGTETKSNGSAIQNGASGGNHLLECSLREVRSNGETPSVEIGAADLTHLQQQQALQVARQLLLQQQQQQQQQQQQQQQQQVSGLKSPKRNDKQPALQVPVSVAMMTPQVITPQQMQQILQQQVLTPQQLQVLLQQQQALMLQQQQLQEFYKKQQEQLQLQLLQQQHAGKQPKEPQQQQVATQQLAFQQQLLQMQQLQQQHLLTLQRQGLLTIQPGQPTLPLQPLAQGMIPTELQQLWKEVTSSHTAEEAASNNHSSLDLSTTCVSSSAPSKTSLIINPHASTNGQLSVHTPKRESLSHEEHSHSHPLYGHGVCKWPGCEAVCEDFQSFLKHLNSEHALDDRSTAQCRVQMQVVQQLELQLAKDKERLQAMMTHLHVKSTEPKATPQPLNLVSSVTLSKTASEASPQSLPHTPTTPTAPITPVTQGPSVITTTSMHNVGPIRRRYSDKYNVPISSADIAQNQEFYKNAEVRPPFTYASLIRQAILESPEKQLTLNEIYNWFTRMFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEQEFQKRRPQKISGNPSLIKNIQTSHTYCTPLNAALQASMAENSIPLYTTASMGNPTLGNLANVMREELNGAMEHTNSNGSDSSPGRSPMQAMHPVHVKEEPLDPDENEGPLSLVTTANHSPDFDHDRDYEDEPVNEDIE

Annotated regions:
phrase: RPPFTYASLIRQA
type: DOMAIN
name: Fork_head_dom
description: Fork head domain

phrase: LTLNEIYNWFTRMFAYF
type: DOMAIN
name: Fork_head_dom
description: Fork head domain

phrase: WKNAVRHNLSLHKCFVR
type: DOMAIN
name: Fork_head_dom
description: Fork head domain

phrase: VRPPFTYASLIRQAILESPEKQLTLNEIYNWFTRMFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEQEFQKR
type: DOMAIN
name: FH_FOXP1_P2
description: Forkhead box protein P1/P2, forkhead domain

phrase: EVRPPFTYASLIRQAILESPEKQLTLNEIYNWFTRMFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEQEFQKR
type: DOMAIN
name: Fork_head_dom
description: Fork head domain

phrase: LYGHGVCKWPGCEAVCEDFQSFLKHLNSEHALDDRSTAQCRVQMQVVQQLELQLAKDKERLQAMMTHL
type: DOMAIN
name: FOXP-CC
description: FOXP, coiled-coil domain

phrase: WKNAVR
type: CONSERVED_SITE
name: TF_fork_head_CS_2
description: Fork head domain conserved site 2

phrase: RPPFTYASLIRQAILESPEKQLTLNEIYNWFTRMFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDEQE
type: DOMAIN
name: Fork_head_dom
description: Fork head domain

phrase: RPPFTYASLIRQAILESPEKQLTLNEIYNWFTRMFAYFRRNAATWKNAVRHNLSLHKCFVRVENVKGAVWTVDE
type: DOMAIN
name: Fork_head_dom
description: Fork head domain
Protein sequence:
MDKQQDQQQEARPVLEGPDIARVLTRIAHEIVERAKGADDVVLLGIPTRGVFLARRLADKLEQITERKMPVGSLDITMYRDDLRMHPPRALARTEIPGDGIDGRLVVLVDDVLFSGRTIRAALDALNDIGRPRAVQLAVLVDRGHRELPIRADYVGKNLPTSLRETVKVQLAEEDGRDTVLLGAKPAAPGAHP

Annotated regions:
phrase: LEGPDIARVLTRIAHEIVERAKGADDVVLLGIPTRGVFLARRLADKLEQITERKMPVGSLDITMYRDDLRMHPPRALARTEIPGDGIDGRLVVLVDDVLFSGRTIRAALDALNDIGRPRAVQLAVLVDRGHRELPIRADYVGK
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: RIAHEIVERAKGADDVVLLGIPTRGVFLARRLADKLEQITERKMPVGSLDITMYRDDLRMHPPRALARTEIPGDGIDGRLVVLVDDVLFSGRTIRAALDALNDIGRPRAVQLAVLVDRGHRELPIRADYV
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain
Protein sequence:
MVLRDILYKASIEAVKGPTDIAVNKIEFDSRLVKEGDVFVAIRGTISDGHAFIDKAISLGAVAIVCETMPETTTDGITYIEAKSASAALAHMAANFYGNPSHNVKLVGITGTNGKTTIASLLYQLFRNAGYKTGLLSTVKIMVNDKEYKATHTTPDSLTINRYLKEMEEVGCEYCFMEVSSHGIHQNRTAGLEFAGGVFTNLSHDHLDYHSSFAEYRDVKKRFFDELPKGSFGLVNVDDKNGLVMLQNTKAKKLTYALKTYADYKAQILENQLSGLLLKINEQEVWVKLIGTFNAYNLLAIYAVAVNLGLEEREVLRLMSELESVSGRFQFIVSDTKITAIVDYAHTPDALENVLSTIENIRTRNEQLITVVGCGGDRDTTKRPVMAHIASSMSDKAIFTSDNPRSESPEEIIEEMEKGVEPQNYKKTLSIVDRKQAIKVACQLAKPNDIILIAGKGHETYQEIKGERFHFDDMETVKEILAQLNK

Annotated regions:
phrase: GRFQFIVSDTKITAIVDYAHTPDALENVLSTIENIRTRNEQLITVVGCGGDRDTTKRPVMAHIASSMSDKAIFTSDNPRSESPEEIIEEMEKGVEPQNYKKTLSIVDRKQAIKVACQLAKPNDIILIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: ITGTNGKTTIASLLYQLFRNAGYKTGLLSTVKIMVNDKEYKATHTTPDSLTINRYLKEMEEVGCEYCFMEVSSHGIHQNRTAGLEFAGGVFTNLSHDHLDYHSSFAEYRDVKKRFFDELPKGSFGLVNVDDKNGLVMLQNTKAKKLTYALKTYADYKAQILENQLSGLLLKINEQEVWVKLIGTFNAYNLLAIYAV
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: KIEFDSRLVKEGDVFVAIRGTISDGHAFIDKAISLGAVAIVCETMPETTTDGITYIEAKSASAALAHMAANF
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain
Protein sequence:
MAESDWDTVTVLRKKGPTAAQAKSKQAILAAQRRGEDVETSKKWAAGQNKQHSITKNTAKLDRETEELHHDRVTLEVGKVIQQGRQSKGLTQKDLATKINEKPQVIADYESGRAIPNNQVLGKIERAIGLKLRGKDIGKPIEKGPRAK

Annotated regions:
phrase: IQQGRQSKGLTQKDLATKINEKPQVIADYESGRAIPNNQVLGKIERAIGLKLRG
type: DOMAIN
name: Cro/C1-type_HTH
description: Cro/C1-type helix-turn-helix domain

phrase: SDWDTVTVLRKKGPTAAQAKSKQAILAAQRRGEDVETSKKWAAGQNKQHSITKNTAKLDRETEELHHDR
type: DOMAIN
name: MBF1_N
description: Multiprotein bridging factor 1, N-terminal

phrase: GKVIQQGRQSKGLTQKDLATKINEKPQVIADYESGRAIPNNQVLGKIERAIGLK
type: DOMAIN
name: Cro/C1-type_HTH
description: Cro/C1-type helix-turn-helix domain

phrase: VIQQGRQSKGLTQKDLATKINEKPQVIADYESGRAIPNNQVLGKIERAIGLKLRG
type: DOMAIN
name: Cro/C1-type_HTH
description: Cro/C1-type helix-turn-helix domain

phrase: IQQGRQSKGLTQKDLATKINEKPQVIADYESGRAIPNNQVLGKIERAIGLK
type: DOMAIN
name: Cro/C1-type_HTH
description: Cro/C1-type helix-turn-helix domain
Protein sequence:
MERIKELRDLMSQSRTREILTKTTVDHMAIIKKYTSGRQEKNPALRMKWMMAMKYPITADKRIMEMIPERNEQGQTLWSKTNDAGSDRVMVSPLAVTWWNRNGPTTSTVHYPKVYKTYFEKVERLKHGTFGPVHFRNQVKIRRRVDINPGHADLSAKEAQDVIMEVVFPNEVGARILTSDSQLTITKEKKEELQDCKIAPLMVAYMLERELVRKTRFLPVAGGTSSVYIEVLHLTQGTCWEQMYTPGGEVRNDDVDQSLIIAARNIVRRATVSADPLASLLEMCHSTQIGGIRMVDILRQNPTEEQAVDICKAAMGLRISSSFSFGGFTFKRTSGSSIKREEEVLTGNLQTLKIRVHEGYEEFTMVGRRATAILRKATRRLIQLIVSGRDEQSIAEAIIVAMVFSQEDCMIKAVRGDLNFVNRANQRLNPMHQLLRHFQKDAKVLFQNWGIEPIDNVMGMIGILPDMTPNAEMSLRGIRVSKMGVDEYSSTERVVVSIDRFLRVRDQRGNVLLSPEEVSETQGTEKLTITYSSSMMWEINGPESVLVNTYQWIIRNWEMIKIQWSQNPTMLYNKMEFEPFQSLVPKAARAQYSGFVRTLFQQMRDVLGTFDTVQIIKLLPFAAAPPEQSRMQFSSLTVNVRGSGMRILVRGNSPVFNYNKATKRLTVLGKDAGSLTEDPDEGTAGVESAVLRGFLILGKEDKRYGPALSINELSNLAKGEKANVLIGQGDVVLVMKRKRDSSILTDSQTATKRIRMAIN

Annotated regions:
phrase: MERIKELRDLMSQSRTREILTKTTVDHMAIIKKYT
type: DOMAIN
name: Flu_PB2_N
description: Influenza RNA polymerase PB2, N-terminal region

phrase: VRNDDVDQSLIIAARNIVRRATVSADPLASLLEMCHSTQIGGIRMVDILRQNPTEEQAVDICKAAMGLR
type: DOMAIN
name: PB2_helical
description: Polymerase basic protein 2, helical domain

phrase: GRQEKNPALRMKWMMAMKYPITADKRIMEMIPERNEQGQTLWSKTNDAGSDRVMVSPLAVTWWNRNG
type: DOMAIN
name: Flu_PB2_2nd
description: Influenza RNA polymerase PB2, second domain

phrase: SSSFSFGGFTFKRTSGSSIKREEEVLTGNLQTLKIRVHEGYEEFTMVGRRATAILRKATRRLIQLIVSGRDEQSIAEAIIVAMVFSQEDCMIKAVRGDLNFVNRANQRLNPMHQLLRHFQKDAKVLFQNWGIEPIDNVMGMIGILPDMTPNAEMSLRGIRVSKMGVDEYSSTERVVVSIDRFLRVRDQRGNVLLSPEEVSETQGTEKLTI
type: DOMAIN
name: Flu_PB2_CAP-bd
description: Influenza RNA polymerase PB2, CAP binding domain

phrase: STVHYPKVYKTYFEKVERLKHGTFGPVHFRNQVKIRRRVDINPGHADLSAKEAQDVIMEVVFPNEVGARILTSDSQLTITKEKKEELQDCKIAPLMVAYMLERELVRKTRFLPVAGGTSSVYIEVLHLTQGTCWEQMYTPG
type: DOMAIN
name: Flu_PB2_middle
description: Influenza RNA polymerase PB2, middle domain

phrase: YSSSMMWEINGPESVLVNTYQWIIRNWEMIKIQWSQNPTMLYNKMEFEPFQSLVPKAARAQYSGFVRTLFQQMRDVLGTFDTVQIIKLLPFAAAPPEQSRMQFSSLTVNVRGSGMRILVRGNSPVFNYNKATKRLTVLGKDAGSLTEDP
type: DOMAIN
name: Flu_PB2_6th
description: Influenza RNA polymerase PB2, sixth domain

phrase: TAGVESAVLRGFLILGKEDKRYGPALSINELSNLAKGEKANVLIGQGDVVLVMKRKRDSSILTDSQTATKRIRM
type: DOMAIN
name: Flu_PB2_C
description: Influenza RNA polymerase PB2, C-terminal domain