nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MRFTRIAIRNFKPYEDAELDLRDGVTVIHGVNGSGKSSLLEACFFALYGSKALAGTLEDVVTTGADDAEITLEFVHDGGEYRIDRRVRVSGDRATTAKCVLDGPEGTVEGARDVRRHVASLLRMDAEAFVNCAYVQQGEVNKLINATPSQRQDMIDDLLQLGKLETYRERAGNARLGVEDVLTKKRSVLEDVESQIEAKEDADLHATLNALESELDSLDEEISNYESQRDKAKSALDAAEATLDEHAEKRERLDEIESAIEDLTAKISADETKRDDLSERVRELDAAADELESDIDDALARADLDDASDEAIADAREALSARESELRDDLSEARTRAQAFETQAERLRERADDLESRAEEKREAAEVDAETAAEAERELESFRETRAELRSALDDAEARFEDAPVELGEAADLLEERREARSEARESLAETETELKNARERLAEAERLRDAGKCPECGQPVEGSPHVDAISEREAAVESLEADRESLESAVESRSAAVEAAEALVEVETRASSRRDRLDLVDERIADREETVESRREAAEEKREAAAELDSEAEEKREAATTQAERAEEVAETVDSLESDLDTLDDRRDRLDRVESLVDTRAEKIDARDRLREKRETLAEVNRERREHLRERRERRDELRETVDEEAVEGAKQRKKNAAAYLERVEDEVLPELREKRDDLQSRVGGVEAELEQLDDLRERRDHLAERVDALESVHDEVSTLESTYGDLRAELRQRNVEVLERMLNETFDLVYANDAYSRIRLDGEYGL

Annotated regions:
phrase: RIAIRNFKPYEDAELDLRDGVTVIHGVNGSGKSSLLEACFFALYGSKALAGTLEDVVTTGADDAEITLEFVHDGGEYRIDRRVRVSGDRATTAKCVLDGPEGTVEGARDVRRHVASLLRMDAEAFVNCAYVQQGEVNKLINATPSQRQDMIDDLLQLGKLETYRERAGNARLGVEDVLTKKRSVLEDVESQIEAKEDADLHATLNALESELDSLDEEISNYESQRDKAKSALDAAEATLDEHAEKRERLDEIESAIEDLTAK
type: DOMAIN
name: Rad50/SbcC_AAA
description: Rad50/SbcC-type AAA domain

phrase: PVELGEAADLLEERREARSEARESLAETETELKNARERLAEAERLRDAGKCPECGQPVEGSPHVDAISEREAAVESLEADRESLESAVESRSAAVEAAEALV
type: DOMAIN
name: Zn_hook_RAD50
description: RAD50, zinc hook
Protein sequence:
MIGKLKGLIDSYGEDYVILDVQGVGYQVHCSARTLQALPQAGGAAVLSIETYVREDQIKLFGFRSDLEREWFRLLQTVQGVGAKVALAVLSTLPPADLANAIALRDKAAVARTSGVGPKVAERIVTELKDKAPAFASVDPAVVALSGALDERSAPRPVTDAISALVNLGYGQPQAAAAIASASRSAGEGAETAQLIKLGLKELSK

Annotated regions:
phrase: AAVARTSGVGPKVAERIVT
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: RLLQTVQGVGAKVALAVLS
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: VTDAISALVNLGYGQPQAAAAIASASRSAGEGAETAQLIKLGLKEL
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal

phrase: MIGKLKGLIDSYGEDYVILDVQGVGYQVHCSARTLQALPQAGGAAVLSIETYVREDQIKLF
type: DOMAIN
name: DNA_helicase_Holl-junc_RuvA_I
description: DNA helicase, Holliday junction RuvA type, domain I, bacterial
Protein sequence:
MANLERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEIHLWFKPEELIDYKSCAHDWVYE

Annotated regions:
phrase: LERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEIHLWFKPEELI
type: DOMAIN
name: NDK-like_dom
description: Nucleoside diphosphate kinase-like domain

phrase: ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCIQVGRNIIHGSDSVESAEKEIHLWFKPE
type: DOMAIN
name: NDK-like_dom
description: Nucleoside diphosphate kinase-like domain

phrase: NIIHGSDS
type: ACTIVE_SITE
name: Nucleoside_diP_kinase_AS
description: Nucleoside diphosphate kinase, active site
Protein sequence:
MQQIMLMCRPGFETEAGQELMDSAAACGLFGYFQPIRNAGLVRFTLGGPESAFELMQRIPLDELVFVRDWFLVIGDCPLPARDRVGAVIEFLRGADWQGSLASRLETRLTETNEDRDLGNFARKWVAPLSRGLREADMLAQDSASAKGDRLELLLLDFETAVVGLSLADNRSPFPQGIPRLRLPASAPSRSALKLEEAWKVFIPEDRYLDYLGGGRKAVDLGAAPGGWTWQLVQQGMMVTAVDNGPMNPELMATGHVEHVRADGYAWRPKRAVDWMVCDIVDKPRKTARLALDWVGGKLCRYTVFNLKLPMKKRYEEWLICRDILLQGLAEAELNCRLRARHLYHDREEITCFIERLD

Annotated regions:
phrase: SRSALKLEEAWKVFIPEDRYLDYLGGGRKAVDLGAAPGGWTWQLVQQGMMVTAVDNGPMNPELMATGHVEHVRADGYAWRPKRAVDWMVCDI
type: DOMAIN
name: RNA_MeTrfase_FtsJ_dom
description: Ribosomal RNA methyltransferase, FtsJ domain

phrase: DRVGAVIEFLRGADWQGSLASRLETRLTETNEDRDLGNFARKWVAPLSRGLREADMLAQDSASAKGDRLELLLLDFETAVVGL
type: DOMAIN
name: RlmM_THUMP-like
description: Ribosomal RNA large subunit methyltransferase M, THUMP-like domain

phrase: MQQIMLMCRPGFETEAGQELMDSAAACGLFGYFQPIRNAGLVRFTLGGPESAFELMQRIPLDELVFVRDW
type: DOMAIN
name: RlmM_FDX
description: RlmM ferredoxin-like domain
Protein sequence:
MTEKIISEIILDLVFQCNDFSQFSNKLKDTKSKLIFESIFWEKVFLSWINIILKKKDYELPNYISEKKSFSLGLRIISNQEIASLNKKWMQKNGPTDVLSFPIISDESLNNLDHIELGDIFISLEMALEQSYEYKHTIYREMIWLASHGFLHLLGWEHNNENDLENMLNLQEYLITRLD

Annotated regions:
phrase: HGFLHLLGWE
type: CONSERVED_SITE
name: YbeY_CS
description: Endoribonuclease YbeY, conserved site
Protein sequence:
MLEVVTAGEPLVALVPQEPGHLRGKRLLEVYVGGAEVNVAVALARLGVKVGFVGRVGEDELGAMVEERLRAEGVDLTHFRRAPGFTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDPDYLEGVRFLHLSGITPALSPEARAFSLWAMEEAKRRGVRVSLDVNYRQTLWSPEEARGFLERALPGVDLLFLSEEEAELLFGRVEEALRALSAPEVVLKRGAKGAWAFVDGRRVEGSAFAVEAVDPVGAGDAFAAGYLAGAVWGLPVEERLRLANLLGASVAASRGDHEGAPYREDLEVLLKATQTFMR

Annotated regions:
phrase: RLLEVYVGGAEVNVAVALARLGVKVGFVGRVGEDELGAMVEERLRAEGVDLTHFRRAPGFTGLYLREYLPLGQGRVFYYRKGSAGSALAPGAFDPDYLEGVRFLHLSGITPALSPEARAFSLWAMEEAKRRGVRVSLDVNYRQTLWSPEEARGFLERALPGVDLLFLSEEEAELLFGRVEEALRALSAPEVVLKRGAKGAWAFVDGRRVEGSAFAVEAVDPVGAGDAFAAGYLAGAVWGLPVEERLRLANLLGASVAASRGDHE
type: DOMAIN
name: PfkB_dom
description: Carbohydrate kinase PfkB

phrase: DPVGAGDAFAAGY
type: CONSERVED_SITE
name: Carboh/pur_kinase_PfkB_CS
description: Carbohydrate/purine kinase, PfkB, conserved site
Protein sequence:
MWRLTGILGRALPRLLGPGFRGITPKPTSSDGPQTTSTTLPLPRVNFDRSGSHGSKRNRDPKCCGWKEAFHWMSAHVSPNTLRDAVSWGTLAVLALHLARQIHFHAPLVAGPQSAERCSWHSPLYRFLSSSWWHPHSSLRRHVLPSPDCPAPRNTGLREPRLGQEEPAARSQGLPSDSSLKPGLLNLPEEEPSDFGFLNASRDFTSQAKAAEAGPPGGKNEQDKPKALPLEEAVTSIQQLFQLSVAIAFNFLGTENIKTGDYTAAFSYFQKAADRGYSKAQYNVGLCLEHGRGTPRDLSKAVLFYHLAAVQGHSLAQYRYARCLLQSPGSMSDPERQRAVSLLKQAADSGLTEAQAFLGVLFTKEPHLDEQKAVKYFWLAASNGDSQSRFHLGICYEKGLGVQRNLGEAVKCYQKSAAMGNEPAQERLRTLFNVEAAGPSHLAIGLKSFSSPSLCSLNTFLAGASGLPHASSTGNLGLLCRSGHLGTSHGAPSRAMPSLERSLVRLGFG

Annotated regions:
phrase: SKAQYNVGLCLEHGRGTPRDLSKAVLFYHLAAVQG
type: REPEAT
name: Sel1-like
description: Sel1-like repeat

phrase: SLAQYRYARCLLQSPGSMSDPERQRAVSLLKQAADSG
type: REPEAT
name: Sel1-like
description: Sel1-like repeat

phrase: SQSRFHLGICYEKGLGVQRNLGEAVKCYQKSAAMG
type: REPEAT
name: Sel1-like
description: Sel1-like repeat

phrase: VAIAFNFLGTENIKTGDYTAAFSYFQKAADRG
type: REPEAT
name: Sel1-like
description: Sel1-like repeat

phrase: TEAQAFLGVLFTKEPHLDEQKAVKYFWLAASNG
type: REPEAT
name: Sel1-like
description: Sel1-like repeat

phrase: FLGTENIKTGDYTAAFSYFQKAADRG
type: REPEAT
name: Sel1-like
description: Sel1-like repeat

phrase: EAQAFLGVLFTKEPHLDEQKAVKYFWLAASNG
type: REPEAT
name: Sel1-like
description: Sel1-like repeat

phrase: SKAQYNVGLCLEHGRGTPRDLSKAVLFYHLAAVQG
type: REPEAT
name: Sel1-like
description: Sel1-like repeat

phrase: LAQYRYARCLLQSPGSMSDPERQRAVSLLKQAADS
type: REPEAT
name: Sel1-like
description: Sel1-like repeat

phrase: SRFHLGICYEKGLGVQRNLGEAVKCYQKSAAMG
type: REPEAT
name: Sel1-like
description: Sel1-like repeat
Protein sequence:
MADNAPPTAETLLSGAAAHPQTAEEIANQYNLLPKLIPYLDRHLVFPLLEFSSGQDDEKEVVRAKYELLKHTNMTDYVANLWKEIHNSDTIPDEFVKKREEVLSKLQEYEEESAKITQLLQDESVVANLRSDKAANLKFLEEQHGVTVEMVNSLYEYGRFQYSCGSYGNAAELLYQFRVLSTDNDKVASATWGKLASEILTTSWDAAMEEVLKVKDSIETRLFNNPLGQLQNRSWLIHWALFPFFNHDPARDALTELFFSPAYINTIQTNCPWILRYLAAAVITNRNRAHKSSGSYQKQLKDLIRVVRQEGYEYSDPITDFVKALYIDFDFEEAQKKLGEAEDVLRSDFFLVSAADAFVEAARHLISESYCKIHQRIDIKDLSTRLGLNQDEGEKWIVNLIRDTRVDAKIDYKEGTVIMNHPPQSVYQQVIEKTKGAFFRTQVLRFVFPI

Annotated regions:
phrase: TELFFSPAYINTIQTNCPWILRYLAAAVITNRNRAHKSSGSYQKQLKDLIRVVRQEGYEYSDPITDFVKALYIDFDFEEAQKKLGEAEDVLRSDFFLVSAADAFVEAARHLISESYCKIHQRIDIKDLSTRLGLNQDEGEKWIVNLIRDTRVDAKIDYKEGTVIMNHPP
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain

phrase: NLLPKLIPYLDRHLVFPLLEFSSGQDDEKEVVRAKYELLKHTNMTDYVANLWKEIHNSDTIPDEFVKKREEVLSKLQEYEEESAKITQLLQDESVVANLRSDKAANLKFLEEQHGVTVEMVNSLYEYGRF
type: DOMAIN
name: eIF3e_N
description: Eukaryotic translation initiation factor 3 subunit E, N-terminal

phrase: SAADAFVEAARHLISESYCKIHQRIDIKDLSTRLGLNQDEGEKWIVNLIRDTRVDAKIDYKEGTVIMNHPPQSVYQQVIEK
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain

phrase: DVLRSDFFLVSAADAFVEAARHLISESYCKIHQRIDIKDLSTRLGLNQDEGEKWIVNLIRDTRVDAKIDYKEGTVIMN
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain

phrase: LLPKLIPYLDRHLVFPLLEFSSGQDDEKEVVRAKYELLKHTNMTDYVANLWKEIHNSDTIPDEFVKKREEVLSKLQEYEEESAKITQLLQDESVVANLRSDKAANLKFLEEQHGVTVEMVNSLYEYGRF
type: DOMAIN
name: eIF3e_N
description: Eukaryotic translation initiation factor 3 subunit E, N-terminal
Protein sequence:
MHIGTTLTNYIIETQRNLPEATGEFTGLLNDISVACKRIADLVNKGDLVGMLGSADSENVQGETQKKLDVVTNEVFIEALTQNGHIAGLVSEEMDDIYTLPNPSQRGRYLLLCDPLDGSSNIDVNVSVGTIFSIVRAPQGSENPSAGDFLQHGTEQVAAGYCLYGPSTILVLAVKGQGVQMFTLNRDFGEFILTRKDVQIPEDTQEFAINVSNQRHWEEPVQRYIDECLQGKEGPRGQDFNMRWVASMVAEVHRILCRGGVFMYPLDAKIKAKGQNGRLRLMYEANPMSLIVEQAGGGATTGRQRILELDPSDIHERAPVVLGSRNEVERIARYHQEG

Annotated regions:
phrase: IPEDTQEFAINVSNQRHWEEPVQRYIDECLQGKEGPRGQDFNMRWVASMVAEVHRILCRGGVFMYPLDAKIKAKGQNGRLRLMYEANPMSLIVEQAGGGATTGRQRILELDPSDIHERAPVVLGSRNEVERIARY
type: DOMAIN
name: FBPase_C_dom
description: Fructose-1-6-bisphosphatase class 1, C-terminal

phrase: TLTNYIIETQRNLPEATGEFTGLLNDISVACKRIADLVNKGDLVGMLGSADSENVQGETQKKLDVVTNEVFIEALTQNGHIAGLVSEEMDDIYTLPNPSQRGRYLLLCDPLDGSSNIDVNVSVGTIFSIVRAPQGSENPSAGDFLQHGTEQVAAGYCLYGPSTILVLAVKGQGVQMFTLNRDFGEFILT
type: DOMAIN
name: FBPase_N
description: Fructose-1-6-bisphosphatase class I, N-terminal
Protein sequence:
MTKKLLIKTWGCQMNEYDSSKMADLLGAANGYELTEDPKEADVLLLNTCSIREKAQEKVFHQLGRWKHLKDKKPDLVIGVGGCVATQEGDHIRQRAPYVDVIFGPQTLHRLPQMIKQSLSNEKTVMDISFPEIEKFDNLPEPKADGVSAFVSIMEGCSKYCTYCVVPYTRGEEVSRPLDDVLFEIAQLAEQGVREVNLLGQNVNAYRGPMYDGDICSFADLLRMVASIDGIDRLRFTTSHPLEFGDDIVAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARPDILISSDFIVAFPGESEKDFQDTMKLIKDVDFDMSYSFVFSPRPGTPAADYPCDIPEQTKKDRLAELQQQISFQSARFSRQMLNTELRALVEGPSKRNPMELRARTENNRVVNFTGSPELIGQFVDLHITESFTNSLRGTLVRTEKDMGLRVAVSPSEMIEKTRREDDLGVGTFTP

Annotated regions:
phrase: KKLLIKTWGCQMNEYDSSKMADLLGAANGYELTEDPKEADVLLLNTCSIREKAQEKVFHQLGRWKHLKDKKPDLVIGVGGCVATQEGDHIRQRAPYVDVIFGPQTLHRLPQMIKQSL
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: QMLNTELRALVEGPSKRNPMELRARTENNRVVNFTGSPELIGQFVDLHITESFTNSLRGTL
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: VSIMEGCSKYCTYCVVPYTR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: VSAFVSIMEGCSKYCTYCVVPYTRGEEVSRPLDDVLFEIAQLAEQGVREVNLLGQNVNAYRGPMYDGDICSFADLLRMVASIDGIDRLRFTTSHPLEFGDDIVAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARPDILISSDFIVAFPGESEKDFQDTMKLIKDVDFDMSYSFVFSPRPGTPAADYPCDIPEQTKKDRLAELQ
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: KADGVSAFVSIMEGCSKYCTYCVVPYTRGEEVSRPLDDVLFEIAQLAEQGVREVNLLGQNVNAYRGPMYDGDICSFADLLRMVASIDGIDRLRFTTSHPLEFGDDIVAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARPDILISSDFIVAFPGESEKDFQDTMKLIKDVDFDMSYSFVFSPRPGTPAADYPCDIPEQTKKDRLAELQQQISFQSA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: KLLIKTWGCQMNEYDSSKMADLLGAANGYELTEDPKEADVLLLNTCSIREKAQEKVFHQLGRWKHLKDKKPDLVIGVGGCVATQEGDHIRQRAPYVDVIF
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: VSIMEGCSKYCTYCVVPYTRGEEVSRPLDDVLFEIAQLAEQGVREVNLLGQNVNAYRGPMYDGDICSFADLLRMVASIDGIDRLRFTTSHPLEFGDDIVAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARPDILISSDFIVAFPGESEKDFQDTMKL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: RQMLNTELRALVEGPSKRNPMELRARTENNRVVNFTGSPELIGQFVDLHITESFTNSLRGTLV
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: TKKLLIKTWGCQMNEYDSSKMADLLGAANGYELTEDPKEADVLLLNTCSIREKAQEKVFHQLGRWKHLKDKKPDLVIGVGGCVATQEGDHIRQRAPYVDVIFGPQTLHRLPQMIKQSLSNEKTVMDISFPEIEKFDNLPEPKADGVSAFVSIMEGCSKYCTYCVVPYTRGEEVSRPLDDVLFEIAQLAEQGVREVNLLGQNVNAYRGPMYDGDICSFADLLRMVASIDGIDRLRFTTSHPLEFGDDIVAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARPDILISSDFIVAFPGESEKDFQDTMKLIKDVDFDMSYSFVFSPRPGTPAADYPCDIPEQTKKDRLAELQQQISFQSARFSRQMLNTELRALVEGPSKRNPMELRARTENNRVVNFTGSPELIGQFVDLHITESFTNSLRGTLVRT
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MNKLALYCRAGFEKELAGEITDKAAQLGVFGFVNLTEQSGYVIFECYQANEADHLAREIKFEQLIFARQMIVVGELLEDLPTADRISPIIAQYKTLQPKHSSALFVETPDTNEAKALLTFCRKFTVPLRNSLKQEGWLTSSDNVKDSISLHILFIRPGCCYVGYAYNHNKSPFFMGIPRLKFPSDAPSRSTLKLEEAILTFIPINQEKKRFNEQMKGVDLGACPGGWTYQLVKRGLFVYAVDHGKIAATLHETGRIEHCVEDGFKFQPPKLKQMDWLVCDMVERPMRISQLIGKWLMNGWCRETIFNLKLPMKKRYHEVQLCLSLFRQLTKQGLCFKLQAKHLYHDREEITVHIVIMGKK

Annotated regions:
phrase: DRISPIIAQYKTLQPKHSSALFVETPDTNEAKALLTFCRKFTVPLRNSLKQEGWLTSSDNVKDSISLHILFIRPGCCYVGYA
type: DOMAIN
name: RlmM_THUMP-like
description: Ribosomal RNA large subunit methyltransferase M, THUMP-like domain

phrase: SRSTLKLEEAILTFIPINQEKKRFNEQMKGVDLGACPGGWTYQLVKRGLFVYAVDHGKIAATLHETGRIEHCVEDGFKFQPPKLKQMDWLVCDMV
type: DOMAIN
name: RNA_MeTrfase_FtsJ_dom
description: Ribosomal RNA methyltransferase, FtsJ domain

phrase: MNKLALYCRAGFEKELAGEITDKAAQLGVFGFVNLTEQSGYVIFECYQANEADHLAREIKFEQLIFARQM
type: DOMAIN
name: RlmM_FDX
description: RlmM ferredoxin-like domain
Protein sequence:
MKFFIDTANINEIKEANELGILAGVTTNPSLVAKEGVDFHERIREICGVVEGPVSAEVISLEADKMIEEGKELAKIAPNVVVKVPMTKEGLKAVKAFSDLGIRTNVTLVFSAVQALLAARAGATYVSPFLGRLDDIGHNGMDLIRQVAEIFAIHDIETEIIAASVRHSVHVTEAALNGAHIATIPANVIGALVKHPLTDQGIEKFLADWEKTQEK

Annotated regions:
phrase: GVTTNPSL
type: ACTIVE_SITE
name: Transaldolase_AS
description: Transaldolase, active site

phrase: VVVKVPMTKEGLKAVKA
type: ACTIVE_SITE
name: Transaldolase_AS
description: Transaldolase, active site
Protein sequence:
MTPVEAQSRIAELRAQVARHDELYHRRAQPQIGDFEYDALKRELAELEAAWPQFARGASPTEQVGDDRTEGFQVYRHRERMMSLDNTYSETELREFHDRLVRELERDGLKFVIEPKIDGLAVSITYEKGKLVRAVTRGNGIEGDDITTNALTIKSLPRELKRADGVPLPAVIEIRGEVFLTTEEFLRINRQREEAGEPLYANPRNLAAGTIKQLDPREVAQRKLEVVLYGRGYVEPASALPETQAQFHGWVKAWGLPTVERFWTATGADEIWAAVQELDALRDTFAYATDGAVVKLDAVPLQRRAGSTSKSPRWAMAYKFAPDRAETQLRAITVQVGRTGVLTPVAELDPVQLAGTTVSRATLHNRDEIARKDIRVGDFVYVEKAGEIIPAVIGVNPARRAPECVPYVFPEKCPECGTAVVQLEGEVAVRCPNFSCPVQVRRRVQHFASKACVDIEGMGEAMVDVLVEKGWVHSVPDIYQLKRENLLTLGKSVEKSTDKLLEAIEASKRAELWRFIHGLGIPHAGAAAAKDLARTFGGLERLASARYEDFIREKASVIGGIGETMALAILAYFAEPRNRAVVDELVRVGVQPVVPNSGSALAGKTFVLTGTLPTLTRDEATAQIEAAGGKVSSGVSKKTSYVLAGEEAGSKLEKARALAVPVIDEAEFLRLLSGG

Annotated regions:
phrase: RFIHGLGIPHAGAAAAKDLARTFGGLERLASARYEDFIREKASVIGGIGETMALAILAYFAEPRNRAV
type: DOMAIN
name: DisA/LigA_HHH
description: DisA/LigA, helix-hairpin-helix motif

phrase: VGRTGVLTPVAELDP
type: CONSERVED_SITE
name: DNA_ligase_CS
description: NAD-dependent DNA ligase, conserved site

phrase: ALAGKTFVLTGTLPTLTRDEATAQIEAAGGKVSSGVSKKTSYVLAGEEAGSKLEKARALAVPVIDEAEFLR
type: DOMAIN
name: BRCT_dom
description: BRCT domain

phrase: KIDGLAVSITYEKGKLVRAVTRGNGIEGD
type: ACTIVE_SITE
name: DNA_ligase_AS
description: NAD-dependent DNA ligase, active site

phrase: GFQVYRHRERMMSLDNTYSETELREFHDRLVRELERDGLKFVIEPKIDGLAVSITYEKGKLVRAVTRGNGIEGDDITTNALTIKSLPRELKRADGVPLPAVIEIRGEVFLTTEEFLRINRQREEAGEPLYANPRNLAAGTIKQLDPREVAQRKLEVVLYGRGYVEPASALPETQAQFHGWVKAWGLPTVERFWTATGADEIWAAVQELDALRDTFAYATDGAVVKLDAVPLQRRAGSTSKSPRWAMAYKFA
type: DOMAIN
name: DNAligase_adenylation
description: NAD-dependent DNA ligase, adenylation

phrase: KCPECGTAVVQLEGEVAVRCPNFSC
type: DOMAIN
name: Znf_DNAligase_C4
description: Zinc-finger, NAD-dependent DNA ligase C4-type

phrase: NSGSALAGKTFVLTGTLPTLTRDEATAQIEAAGGKVSSGVSKKTSYVLAGEEAGSKLEKARALAVPVIDEAEFLRLLSG
type: DOMAIN
name: BRCT_dom
description: BRCT domain

phrase: GSALAGKTFVLTGTLPTLTRDEATAQIEAAGGKVSSGVSKKTSYVLAGEEAGSKLEKARALAVPVIDEAEFLRLLSG
type: DOMAIN
name: BRCT_dom
description: BRCT domain

phrase: ETQLRAITVQVGRTGVLTPVAELDPVQLAGTTVSRATLHNRDEIARKDIRVGDFVYVEKAGEIIPAVIGVNPARR
type: DOMAIN
name: NAD_DNA_ligase_OB
description: NAD-dependent DNA ligase, OB-fold

phrase: SRIAELRAQVARHDELYHRRAQPQIGDFEYDALKRELAELEAAWPQFARGASPTEQVGDDRTEGFQVYRHRERMMSLDNTYSETELREFHDRLVRELERDGLKFVIEPKIDGLAVSITYEKGKLVRAVTRGNGIEGDDITTNALTIKSLPRELKRADGVPLPAVIEIRGEVFLTTEEFLRINRQREEAGEPLYANPRNLAAGTIKQLDPREVAQRKLEVVLYGRGYVEPASALPETQAQFHGWVKAWGLPTVERFWTATGADEIWAAVQELDALRDTFAYATDGAVVKLDAVPLQRRAGSTSKSPRWAMAYKFA
type: DOMAIN
name: DNAligase_adenylation
description: NAD-dependent DNA ligase, adenylation

phrase: EAQSRIAELRAQVARHDELYHRRAQPQIGDFEYDALKRELAELEAAWPQFARGASPTEQVGDDRTEGFQVYRHRERMMSLDNTYSETELREFHDRLVRELERDGLKFVIEPKIDGLAVSITYEKGKLVRAVTRGNGIEGDDITTNALTIKSLPRELKRADGVPLPAVIEIRGEVFLTTEEFLRINRQREEAGEPLYANPRNLAAGTIKQLDPREVAQRKLEVVLYGRGYVEPASALPETQAQFHGWVKAWGLPTVERFWTATGADEIWAAVQELDALRDTFAYATDGAVVKLDAVPLQRRAGSTSKSPRWAMAYKFAPDRAETQLRAITVQVGRTGVLTPVAELDPVQLAGTTVSRATLHNRDEIARKDIRVGDFVYVEKAGEIIPAVIGVNPARRAPECVPYVFPEKCPECGTAVVQLEGEVAVRCPNFSCPVQVRRRVQHFASKA
type: DOMAIN
name: DNAligase_N
description: NAD-dependent DNA ligase, N-terminal
Protein sequence:
MGDPKRQRKKYETPSHPWIKERLDRERVLKRKYALKNKKELWRHETQLKEFRRRARRLLAARGKQAEIERQQLLQRLHRLGLLPADAALDDVLSLTVEDVLERRLQTLVYKKGLARTIRQARQLIVHGHIEVNGQIIRSPGYLVLREEEDTITYAKNSPFAKESHPERMVIEQAKQGGEA

Annotated regions:
phrase: RRLQTLVYKKGLARTIRQARQLIVHGHIEVNGQIIRSPGYLVLREE
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: RRLQTLVYKKGLARTIRQARQLIVHGHIEVNGQIIRSPGYLVLREEEDTITYAKNSPFAKES
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: HPWIKERLDRERVLKRKYALKNKKELWRHETQLKEFRRRARRLLAARGKQAEIERQQLLQRLHRLGLLPADAALDDVLSLTVEDVL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: LERRLQTLVYKKGLARTIRQARQL
type: CONSERVED_SITE
name: Ribosomal_uS4_CS
description: Small ribosomal subunit protein uS4, conserved site

phrase: KRQRKKYETPSHPWIKERLDRERVLKRKYALKNKKELWRHETQLKEFRRRARRLLAARGKQAEIERQQLLQRLHRLGLLPADAALDDVLSLTVEDVL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal
Protein sequence:
MSERIYDIAVISGDGIGKEVVPEGIRVLEAAARRHGFTIRQKWHDFAHCDYYAKHGRMMPETWKEEIGKPAAIFFGAVGWPEIVPDHISLWGSLLQFRREYDQYVNLRPVRLMEGVPCPLAGRKPGDIDFWVVRENTEGEYSAIGGRMFEGTEREMVMQETVMTRKGVDRILKFAFDLAQTRPRKLVTSATKSNGIAITMPYWDERVEAMASSYPDVAWNKFHIDILSANFVLKPQIFDVVVGSNLFGDILSDLGPACAGTIGIAPSGNINPEGVNPSLFEPVHGSAPDIAGQNLANPIGQIWSAAMMLEHFGETGAAADIMHAVETALKEPKLRTRDLGGSADTQTCGKAIASLLA

Annotated regions:
phrase: IAVISGDGIGKEVVPEGIRVLEAAARRHGFTIRQKWHDFAHCDYYAKHGRMMPETWKEEIGKPAAIFFGAVGWPEIVPDHISLWGSLLQFRREYDQYVNLRPVRLMEGVPCPLAGRKPGDIDFWVVRENTEGEYSAIGGRMFEGTEREMVMQETVMTRKGVDRILKFAFDLAQTRPRKLVTSATKSNGIAITMPYWDERVEAMASSYPDVAWNKFHIDILSANFVLKPQIFDVVVGSNLFGDILSDLGPACAGTIGIAPSGNINPEGVNPSLFEPVHGSAPDIAGQNLANPIGQIWSAAMMLEHFGETGAAADIMHAVETALKEPKLRTRDLGGSADTQTCGK
type: DOMAIN
name: IsoPropMal-DH-like_dom
description: Isopropylmalate dehydrogenase-like domain

phrase: DIAVISGDGIGKEVVPEGIRVLEAAARRHGFTIRQKWHDFAHCDYYAKHGRMMPETWKEEIGKPAAIFFGAVGWPEIVPDHISLWGSLLQFRREYDQYVNLRPVRLMEGVPCPLAGRKPGDIDFWVVRENTEGEYSAIGGRMFEGTEREMVMQETVMTRKGVDRILKFAFDLAQTRPRKLVTSATKSNGIAITMPYWDERVEAMASSYPDVAWNKFHIDILSANFVLKPQIFDVVVGSNLFGDILSDLGPACAGTIGIAPSGNINPEGVNPSLFEPVHGSAPDIAGQNLANPIGQIWSAAMMLEHFGETGAAADIMHAVETALKEPKLRTRDLGGSADTQTCGKA
type: DOMAIN
name: IsoPropMal-DH-like_dom
description: Isopropylmalate dehydrogenase-like domain

phrase: NLFGDILSDLGPACAGTIG
type: CONSERVED_SITE
name: IsoCit/isopropylmalate_DH_CS
description: Isocitrate/isopropylmalate dehydrogenase, conserved site
Protein sequence:
MASKLKTFINLRDYPITLFNQIRSLSSRILTPINQSHYRKRILLANLLQRYGFPPSSLQHFLSRNNHLLNSDLVETEISLGILLSLKIPQKSLVSLISDCPNVLRSEFLRKWRVPLSNCGKHGVVSSSAIKSVLEHSSRIGIGPDKFNECVRVLKSLGFCDSTVSRILSSFPGVLLVNEIEIRRKIEFLVGIGIARDNIERFFHVFPEVLGIGTETRLKPLLDEFMKMGFSKDDVKKEIAREPRVLGLELGELPRCLELINTLKCREVIRVSIISEGAFRAGFEVKLRVDCLCKYGLIRRDAFKVVWKEPRVILYEIEDIEKKIEFLTNRMGFHINCLADVPEYLGVNLQKQIVPRYNVIDYLKLKGGLGCDIGLKGLIKPSMKRFYNLYVMPYPECERIFGKRKENVRVNKRHPAGLWKLMKPPSNLTTKEDVQNMKSFIESLA

Annotated regions:
Protein sequence:
MVKYTVENKIIAGLPKGKLKGANFVIAHETANSKSTIDNEVSYMTRNWKNAFVTHFVGGGGRVVQVANVNYVSWGAGQYANSYSYAQVELCRTSNATTFKKDYEVYCQLLVDLAKKAGIPITLDSGSKTSDKGIKSHKWVADKLGGTTHQDPYAYLSSWGISKAQFASDLAKVSGGGNTGTAPAKPSTPAPKPSTPSTNLDKLGLVDYMNAKKMDSSYSNRDKLAKQYGIANYSGTASQNTTLLSKIKGGAPKPSTPAPKPSTSTAKKIYFPPNKGNWSVYPTNKAPVKANAIGAINPTKFGGLTYTIQKDRGNGVYEIQTDQFGRVQVYGAPSTGAVIKK

Annotated regions:
phrase: AGLPKGKLKGANFVIAHETANSKSTIDNEVSYMTRNWKNAFVTHFVGGGGRVVQVANVNYVSWGAGQYANSYSYAQVELCRTSNATTFKKDYEVYCQLLVDLAKKAGIPITLDSGSKTSDKGIKSHKWVADKLGGTTHQDP
type: DOMAIN
name: Amidase_domain
description: N-acetylmuramoyl-L-alanine amidase domain

phrase: NFVIAHETANSKSTIDNEVSYMTRNWKNAFVTHFVGGGGRVVQVANVNYVSWGAGQYANSYSYAQVELCRTSNATTFKKDYEVYCQLLVDLAKKAGIPITLDSGSKTSDKGIKSHKWVADKLGGTTHQD
type: DOMAIN
name: Amidase_domain
description: N-acetylmuramoyl-L-alanine amidase domain

phrase: NFVIAHETANSKSTIDNEVSYMTRNWKNAFVTHFVGGGGRVVQVANVNYVSWGAGQYANSYSYAQVELCRTSNATTFKKDYEVYCQLLVDLAKKAGIPITLDSGSKTSDKGIKSHKWVADKLGGTTHQDPYA
type: DOMAIN
name: Amidase_domain
description: N-acetylmuramoyl-L-alanine amidase domain
Protein sequence:
MTGCSAPAETSGSRKMVDPFGRNISYLRVSVTDRCDLRCFYCMSEDMTFLPKADLLTLEELDRLCSAFIAKGVRKLRLTGGEPLVRRNVMSLIRSLSRHLQSGALKELTLTTNGSQLVRFANELKDCGVKRINVSLDTLDPARFREITRWGDIQKVMAGIDAAQAAGLAVKINAVALKNLNEDEIPSLMEWAHSRDMALTLIEVMPMGDIGASRADQYLPLSMLRARLEGQYTLTDLDDSTGGPARYVRVSETGGKLGFITPMTHNFCESCNRVRITCTGTLHTCLGHEDASDLRRPLRASPTDELLYETIDRAIGLKPKGHDFIIDRHNRPSVSRHMSVTGG

Annotated regions:
phrase: RKMVDPFGRNISYLRVSVTDRCDLRCFYCMSEDMTFLPKADLLTLEELDRLCSAFIAKGVRKLRLTGGEPLVRRNVMSLIRSLSRHLQSGALKELTLTTNGSQLVRFANELKDCGVKRINVSLDTLDPARFREITRWGDIQKVMAGIDAAQAAGLAVKINAVALKNLNEDEIPSLMEWAHSRDMALTLIEVMPMGDIGASRADQYLPLSMLRARLEGQYTLTDLDDSTGGPARYVRVSETGGKLGFITPMTHNFCESCNRVRITCTGTLHTCLGHEDASDLRRPLRASPTDELLYETIDRAIGLKPKGHDFIIDRHNRPSVSRHMSVTG
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: ALTLIEVMPMGDIGASRADQYLPLSMLRARLEGQYTLTDLDDSTGGPARYVRVSETGGKLGFITPMTHNFCESCNRVRITCTGTLHTCLGHEDASDLRRPLRASPTDELLYETIDRAIGLKPKGH
type: DOMAIN
name: MoaA_twitch
description: Molybdenum cofactor biosynthesis protein A-like, twitch domain

phrase: SYLRVSVTDRCDLRCFYCMSEDMTFLPKADLLTLEELDRLCSAFIAKGVRKLRLTGGEPLVRRNVMSLIRSLSRHLQSGALKELTLTTNGSQLVRFANELKDCGVKRINVSLDTLDPARFREITRWGDIQKVMAGIDAAQAAGLAVKINAVALKNLNEDEIPSLMEWAHSRDMALTLIEVMPMGDIGASRADQYLPLSMLR
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: MTHNFCESCNRVRITCTGTLHTCLGHEDASDLRRPLRASPTDELLYETIDRAIGLKPKGHDFIIDRHNR
type: DOMAIN
name: MoaA_twitch
description: Molybdenum cofactor biosynthesis protein A-like, twitch domain

phrase: VSVTDRCDLRCFYCMSEDMTFLPKADLLTLEELDRLCSAFIAKGVRKLRLTGGEPLVRRNVMSLIRSLSRHLQSGALKELTLTTNGSQLVRFANELKDCGVKRINVSLDTLDPARFREITRWGDIQKVMAGIDAAQAAGLAVKINAVALKNLNEDEIPSLMEW
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: PFGRNISYLRVSVTDRCDLRCFYCMSEDMTFLPKADLLTLEELDRLCSAFIAKGVRKLRLTGGEPLVRRNVMSLIRSLSRHLQSGALKELTLTTNGSQLVRFANELKDCGVKRINVSLDTLDPARFREITRWGDIQKVMAGIDAAQAAGLAVKINAVALKNLNEDEIPSLMEWAHSRDMALTLIEVMPMGDIGASRADQYLPLSMLRARLEGQYTLTDLDDSTGG
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VTDRCDLRCFY
type: CONSERVED_SITE
name: MoaA_NifB_PqqE_Fe-S-bd_CS
description: MoaA/NifB/PqqE, iron-sulphur binding, conserved site
Protein sequence:
MARIAGVDLPRNKYINIALTYIFGIGNSRAKAILAEANVEANRKVSDLNEEEVNRIRTAIENGSSVEGDLRKDVSMHIKRLIEIGSYRGYRHRRSLPVRGQRTHTNARTRKGPRKGTVANKKKATAK

Annotated regions:
phrase: RGYRHRRSLPVRG
type: CONSERVED_SITE
name: Ribosomal_uS13_CS
description: Small ribosomal subunit protein uS13, conserved site
Protein sequence:
MRSLWLLLGLGLLAVSHVQASTEFSEDLLDEDLDLSDIDENEEEFLRLLEEKNKIKDIERENEIATKLAEVQHNLLNPVVEVDLCETMSCGAGRICQMHDEKPKCVCIPECPEEVDTRRLVCTNTNETWPSDCSVYQQRCWCDSGEPGCTNPDNAHMHIDYYGACHEPRSCEGEDLKDFPRRMRDWLFNVMRDLAERDELTEHYMQMELEAETNNSRRWSNAAVWKWCDLDGDTDRSVSRHELFPIRAPLVSLEHCIAPFLESCDSNKDHRITLVEWGACLELDPEDLKERCDDVQRAQPHLLG

Annotated regions:
phrase: RSCEGEDLKDFPRRMRDWLFNVMRDLAERDELTEHYMQMELEAETNNSRRWSNAAVWKWCDLDGDTDRSVSRHELFPIRAPLVSLEHCIAPFLESCDSNKDHRITLVEWGA
type: DOMAIN
name: SPARC/Testican_Ca-bd-dom
description: SPARC/Testican, calcium-binding domain

phrase: DSNKDHRITLVE
type: BINDING_SITE
name: EF_Hand_1_Ca_BS
description: EF-Hand 1, calcium-binding site

phrase: CETMSCGAGRICQMHDEKPKCVCIPECPEEVDTRRLVCTNTNETWPSDCSVYQQRCWCDSGEPGCTNPDNAHMHIDYYGACHE
type: DOMAIN
name: SPARC_FS
description: SPARC, follistatin-like domain

phrase: FPRRMRDWLF
type: CONSERVED_SITE
name: Osteonectin_CS
description: Osteonectin-like, conserved site