nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MEGDGVPWGSEPVSGPGPGGGGMIRELCRGFGRYRRYLGRLRQNLRETQKFFRDIKCSHNHTCLSSLTGGGGAERGPAGDVAETGLQAGQLSCISFPPKEEKYLQQIVDCLPCILILGQDCNVKCQLLNLLLGVQVLPTTKLGSEESCKLRRLRFTYGTQTRVSLALPGQYELVHTLVAHQGNWETIPEEDLEVQENNEDAAHVLAELEVTMHHALLQEVDVVVAPCQGLRPTVDVLGDLVNDFLPVITYALHKDELSERDEQELQEIRKYFSFPVFFFKVPKLGSEIIDSSTRRMESERSPLYRQLIDLGYLSSSHWNCGAPGQDTKAQSMLVEQSEKLRHLSTFSHQVLQTRLVDAAKALNLVHCHCLDIFINQAFDMQRDLQITPKRLEYTRKKENELYESLMNIANRKQEEMKDMIVETLNTMKEELLDDATNMEFKDVIVPENGEPVGTREIKCCIRQIQELIISRLNQAVANKLISSVDYLRESFVGTLERCLQSLEKSQDVSVHITSNYLKQILNAAYHVEVTFHSGSSVTRMLWEQIKQIIQRITWVSPPAITLEWKRKVAQEAIESLSASKLAKSICSQFRTRLNSSHEAFAASLRQLEAGHSGRLEKTEDLWLRVRKDHAPRLARLSLESCSLQDVLLHRKPKLGQELGRGQYGVVYLCDNWGGHFPCALKSVVPPDEKHWNDLALEFHYMRSLPKHERLVDLHGSVIDYNYGGGSSIAVLLIMERLHRDLYTGLKAGLTLETRLQIALDVVEGIRFLHSQGLVHRDIKLKNVLLDKQNRAKITDLGFCKPEAMMSGSIVGTPIHMAPELFTGKYDNSVDVYAFGILFWYICSGSVKLPEAFERCASKDHLWNNVRRGARPERLPVFDEECWQLMEACWDGDPLKRPLLGIVQPMLQGIMNRLCKSNSEQPNRGLDDST

Annotated regions:
phrase: PKLGQELGRGQYGVVYLCDNWGGHFPCALKSVVPPDEKHWNDLALEFHYMRSLPKHERLVDLHGSVIDYNYGGGSSIAVLLIMERLHRDLYTGLKAGLTLETRLQIALDVVEGIRFLHSQGLVHRDIKLKNVLLDKQNRAKITDLGFCKPEAMMSGSIVGTPIHMAPELFTGKYDNSVDVYAFGILFWYICSGSVKLPEAFERCASKDHLWNNVRRGARPERLPVFDEECWQLMEACWDGDPLKRPLLGIVQPM
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: GQELGRGQYGVVYLCDNWGGHFPCALKSVVPPDEKHWNDLALEFHYMRSLPKHERLVDLHGSVIDYNYGGGSSIAVLLIMERLHRDLYTGLKAGLTLETRLQIALDVVEGIRFLHSQGLVHRDIKLKNVLLDKQNRAKITDLGFCKPEAMMSGSIVGTPIHMAPELFTGKYDNSVDVYAFGILFWYICSGSVKLPEAFERCASKDHLWNNVRRGARPERLPVFDEECWQLMEACWDGDPLKRP
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: LVHRDIKLKNVL
type: ACTIVE_SITE
name: Ser/Thr_kinase_AS
description: Serine/threonine-protein kinase, active site

phrase: LGRGQYGVVYLCDNWGGHFPCAL
type: BINDING_SITE
name: Protein_kinase_ATP_BS
description: Protein kinase, ATP binding site

phrase: PKLGQELGRGQYGVVYLCDNWGGHFPCALKSVVPPDEKHWNDLALEFHYMRSLPKHERLVDLHGSVIDYNYGGGSSIAVLLIMERLHRDLYTGLKAGLTLETRLQIALDVVEGIRFLHSQGLVHRDIKLKNVLLDKQNRAKITDLGFCKPEAMMSGSIVGTPIHMAPELFTGKYDNSVDVYAFGILFWYICSGSVKLPEAFERCASKDHLWNNVRRGARPERLPVFDEECWQLMEACWDGDPLKRPLLGIVQPM
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain
Protein sequence:
MWRSLGLALALCLLPSGGTESQDQSSLCKQPPAWSIRDQDPMLNSNGSVTVVALLQASXYLCILQASKLEDLRVKLKKEGYSNISYIVVNHQGISSRLKYTHLKNKVSEHIPVYQQEENQTDVWTLLNGSKDDFLIYDRCGRLVYHLGLPFSFLTFPYVEEAIKIAYCEKKCGNCSLTTLKDEDFCKRVSLATVDKTVETPSPHYHHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAPPGLHHHHKHKGQHRQGHPENRDMPASEDLQDLQKKLCRKRCINQLLCKLPTDSELAPRSXCCHCRHLIFEKTGSAITXQCKENLPSLCSXQGLRAEENITESCQXRLPPAAXQISQQLIPTEASASXRXKNQAKKXEXPSN

Annotated regions:
phrase: DQSSLCKQPPAWSIRDQDPMLNSNGSVTVVALLQASXYLCILQASKLEDLRVKLKKEGYSNISYIVVNHQGISSRLKYTHLKNKVSEHIPVYQQEENQTDVWTLLNGSKDDFLIYDRCGRLVYHLGLPFSFLTFPYVEEAIKIAYCEKKCGNCSLTTLKDEDFCKRVSLATVDKTVETPSPHYHHEHHHNHGHQHLGSSELSENQQPGAPNAPTHPAPPGLHHH
type: DOMAIN
name: Selenoprotein-P_N
description: Selenoprotein P, N-terminal

phrase: GQHRQGHPENRDMPASEDLQDLQKKLCRKRCINQLLCKLPTDSELAPRSXCCHCRHLIFEKTGSAITXQCKENLPSLCSXQGLRAEENITESCQXRLPPAAXQISQQLIPTEASASXRXKNQAKKXEXPS
type: DOMAIN
name: SelP_C
description: Selenoprotein P, C-terminal
Protein sequence:
MMHVKHIALGSRLLPLSFACNPSEVVHVVGPNGSGKSTLLGAISGTLTQREGVSGQVLVDSNDLLTMPLSEQAHIRGYLCQQSRPTFNVDVFQYLALSLPTGANISDAKVRDAVNIVIELVQLQDKLHRSIQTLSGGEWQRVRLAGVCLQVWRTINPYSQLLILDEPAAPLDIAQEGLLYQLINAVAAQGIGVLVANHDLNRTLRYADKVLLLNNGVLHSLGHADEVLTEEGLAEVFQTQVRKVVLEDRPYLIFD

Annotated regions:
phrase: MHVKHIALGSRLLPLSFACNPSEVVHVVGPNGSGKSTLLGAISGTLTQREGVSGQVLVDSNDLLTMPLSEQAHIRGYLCQQSRPTFNVDVFQYLALSLPTGANISDAKVRDAVNIVIELVQLQDKLHRSIQTLSGGEWQRVRLAGVCLQVWRTINPYSQLLILDEPAAPLDIAQEGLLYQLINAVAAQGIGVLVANHDLNRTLRYADKVLLLNNGVLHSLGHADEVLTEEGLAEVFQT
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: PSEVVHVVGPNGSGKSTLLGAISGTLTQREGVSGQVLVDSNDLLTMPLSEQAHIRGYLCQQSRPTFNVDVFQYLALSLPTGANISDAKVRDAVNIVIELVQLQDKLHRSIQTLSGGEWQRVRLAGVCLQVWRTINPYSQLLILDEPAAPLDIAQEGLLYQLINAVAAQGIGVLVANHDLNRTLRYADKVLLLNNG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: PLSFACNPSEVVHVVGPNGSGKSTLLGAISGTLTQREGVSGQVLVDSNDLLTMPLSEQAHIRGYLCQQSRPTFNVDVFQYLALSLPTGANISDAKVRDAVNIVIELVQLQDKLHRSIQTLSGGEWQRVRLAGVCLQVWRTINPYSQLLILDEP
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain
Protein sequence:
MALSRCLRTRTAFLSPLDQLNSSFYIRWSLVLHAKDRDKAVNRLSKGLNAVTSKLPFLKGRINYHTDTANNKIASASRAVISMSDDSPNLSLRELRPAKELPSLARIKQQGAPSHLFTDDLYSLPIFIDTTSKQSHPVLKTTYAPIEGGLILNICVHHGVMDGQGLATLTDLWASFTRQQDQNENEVQQPKNLPDPDEPLTRTARLATAINATADPEITDIETSLQRYRNDRILEQNIAASTGDSRKKTSRIFAFSSNKLKDAKEVLANNGCHVTTNSILNAAVWSNLTRVRLSRRTQLPPTPFARFTQMVDGRRQLLPKINKPGPYMGNVVLTSSADVSLDTLVATGFFNYLSVSLMAPVAQAIYDASRKVTTEYIDGFLKTLQKVDDPASLGIGSMSQHGVDFISTSVANAPFYECDFGPSLSEDSAGGKEGKPVFVRYPYIDWADGNMILLPRRRQPTENDETIEAYIMLAEDDLVALAEDPGFCSWLKE

Annotated regions:
Protein sequence:
MDRLIDEARDLPDELCEVNTLLTNQSLLVASANAYTHGKPSSRLKNYRVATSHLMYWLKAPSYLSNFQLTLLCLFVFYLARRFYKKNTRLPPTIINQIVSNEEKAKANLKARPKQTKTTAKANATATANAHANANANDSNSNSPPDIHITKNNWFIFWYKTLPLNALSRFWGNFNQLTLPTWFRPYGYRFYIWLYNVNFDEIKDKNLSNYLNLGQFFYRNINLKLRPIDNTPNSIVSPVDGTVLKFGIVHDPNGEIEQVKGLTYTIKSFLGVHNHDNEYDLLNSHSDLYFTVIYLSPGDYHHFHSPVNWTVKLRRHFPGRLFSVSPFFQKNLKNLFILNERVPLLGSWKYGFFSMTLVGATNVGSINLNFDKDLKTNQKKYSHINKKSLNEKSFCYELDYTISQDAGVLLAEDQDRMPPTNNQDGVPLTKGEEMGGFKFGSTVVICFQAPKDFKFNIQLNERIKMGQLIGSALRSEAK

Annotated regions:
Protein sequence:
MPEGNGTVALAFSGGLDTTVCVSLLKEEYGYDEVIGVTVDVGQPDYEFEEAEETAEALGVEQHVVDATEEFADLCMEAVKANADYQGYPLGTALARPVIAKAILSVAEDEGCSAVAHGCTGKGNDQLRFESVWRDSDLDVIAPVRELGLTREWENEYAAEKGLPVEGGDGGRYSIDTNLWSRSIEGSELEDPSTIPADDIYKWTDNPSDKDAELVEVEFEDGVPVAVDGEELGGVELIEQLNKQAGAHGIGRTDMMEDRMLGLKVRENYEHPAATVLLTAHEALEGLVLTQEERQFKAQVDQEWSQKAYQGLVDAPLTGALEAFIDDTNERVTGTVTVKLEGGHCRPVSRESDYAVYSESAASFNEEDVSGGITQQDATGVAKYHGFQSRLANKILDDAKKGAAVTDGSGDHAASEDTEE

Annotated regions:
phrase: YSIDTNLWSRSIEGSELEDPSTIPADDIYKWTDNPSDKDAELVEVEFEDGVPVAVDGEELGGVELIEQLNKQAGAHGIGRTDMMEDRMLGLKVRENYEHPAATVLLTAHEALEGLVLTQEERQFKAQVDQEWSQKAYQGLVDAPLTGALEAFIDDTNERVTGTVTVKLEGGHCRPVSRESDYAVYSESAASFNEEDVSGGITQQDATGVAKYHGFQSR
type: DOMAIN
name: Arginosuc_syn_C
description: Arginosuccinate synthase C-terminal domain

phrase: GCTGKGNDQLR
type: CONSERVED_SITE
name: Arginosuc_synth_CS
description: Argininosuccinate synthase, conserved site

phrase: AFSGGLDT
type: CONSERVED_SITE
name: Arginosuc_synth_CS
description: Argininosuccinate synthase, conserved site

phrase: VALAFSGGLDTTVCVSLLKEEYGYDEVIGVTVDVGQPDYEFEEAEETAEALGVEQHVVDATEEFADLCMEAVKANADYQGYPLGTALARPVIAKAILSVAEDEGCSAVAHGCTGKGNDQLRFESVWRDSDLDVIAPVRELGLTREWENEYAAEKGL
type: DOMAIN
name: Arginosuc_syn_N
description: Arginosuccinate synthase-like, N-terminal domain
Protein sequence:
MSKLWGGRFTEEAEAWVEEFGASISFDQQLVNQDINGSIAHVTMLAKQGIVTKEEAEKIKIGLQYLLEEAKQNKLHFSVEAEDIHLNIEKMLIEKIGEVGGKLHTGRSRNDQVATDMHLYLKEKVEHIMKATKQLQTVLVHQAENNIETIMPGYTHLQRAQPISFAHHILAYFWMLERDVNRYEDSLKRINISPLGAGALAGTTFPIDREYSAELLGFNGIYENSLDAVSDRDFILEFLSNSSMLMMHLSRFCEELILWSSQEFQFIEMSDQYATGSSIMPQKKNPDMAELIRGKTGRVYGNLFSLLTVMKGLPLAYNKDLQEDKEGMFDTVKTVEGCLHIMAGMLETMTVNKEKMGQAVTQDFSNATEIADYLANKGLPFRQAHEIVGKLVLHCTQKGIYLIDVPLATYKEMSALFEGDLYEVLSPYAAVKRRNSAGGTGFEQIEKALEKAKGLVGEIVGIK

Annotated regions:
phrase: GSSIMPQKK
type: CONSERVED_SITE
name: Fumarate_lyase_CS
description: Fumarate lyase, conserved site

phrase: GRFTEEAEAWVEEFGASISFDQQLVNQDINGSIAHVTMLAKQGIVTKEEAEKIKIGLQYLLEEAKQNKLHFSVEAEDIHLNIEKMLIEKIGEVGGKLHTGRSRNDQVATDMHLYLKEKVEHIMKATKQLQTVLVHQAENNIETIMPGYTHLQRAQPISFAHHILAYFWMLERDVNRYEDSLKRINISPLGAGALAGTTFPIDREYSAELLGFNGIYENSLDAVSDRDFILEFLSNSSMLMMHLSRFCEELILWSSQEFQFIEMSDQYATGSSIMPQKKNPDMAELIRGKTGRVY
type: DOMAIN
name: Fumarate_lyase_N
description: Fumarate lyase, N-terminal

phrase: FSNATEIADYLANKGLPFRQAHEIVGKLVLHCTQKGIYLIDVPLATYKEMSALFEGDLYEVLSPYAAV
type: DOMAIN
name: Arg_succ_lyase_C
description: Argininosuccinate lyase, C-terminal
Protein sequence:
MKQCSVAIVGVTGLVGAATLALLEERQFPVKRLYLLASDRSAGEFREFRGEAHTVQALTNFDFTQTDICFFCAGSELAEVYVAQAAACGNIVLDKSAFFRYHDDVPLVIPEVNVSALSYYHKKNIIANPNCNTIPIAVALKPIYDAVGISRLNVATYQSVSGSGKEAITELMEQAKQLLEGRSIHPKVYPQQIAFNVLPHIDKFHENGYTWEEMKIVLEMRKIFNDNALAINPTTVRVPVFYGHAAAVHIETDDKITTRAALVLLEQAPGLKLITGQHPYPTPALDAQGNDFVYVGRVREDISHERGLNLWVVADNLRKGAALNAIQVAEELVRSYL

Annotated regions:
phrase: SVAIVGVTGLVGAATLALLEERQFPVKRLYLLASDRSAGEFREFRGEAHTVQALTNFDFTQTDICFFCAGSELAEVYVAQAAACGNIVLDKSAFFRYHDDVPLVIPEVNVSALSY
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: LKPIYDAVGISRLNVATYQSVSGSGKEAITELMEQAKQLLEGRSIHPKVYPQQIAFNVLPHIDKFHENGYTWEEMKIVLEMRKIFNDNALAINPTTVRVPVFYGHAAAVHIETDDKITTRAALVLLEQAPGLKLITGQHPYPTPALDAQGNDFVYVGRVREDISHERGLNLWVVADNLR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: VAIVGVTGLVGAATLALLEERQFPVKRLYLLASDRSAGEFREFRGEAHTVQALTNFDFTQTDICFFCAGSELAEVYVAQAAACGNIVLDKSAFFRYHDDVPLVIPEVNVSA
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MAQHEVNYLKSGGLPVVLTTVDHLVNWGRSNSLWALTYGLACCAIEMMASGAGRYDFDRFGTIFRASPRQADVMIVAGTLTKKHAEFIRRLYDQMSEPKWVISMGSCANTGGMFNTYATVQGCDRIIPVDVYLPGCAPRPETLQYAVMVLQQKIRREKASRKLPPKRLV

Annotated regions:
phrase: CCAIEMMASGAGRYDFDRFGTIFRASPRQADVMIVAGTLTKKHAEFIRRLYDQMSEPKWVISMGSCANTGGMFNTYATVQGCDRIIPVDVYLPGCAPRPETLQYAV
type: DOMAIN
name: NADH_UbQ_OxRdtase-like_20kDa
description: NADH:ubiquinone oxidoreductase-like, 20kDa subunit
Protein sequence:
MLKKTTWIKLPRNVLVGHDVIGDLAAAIEELYLDGRPLIVTSPTPDQLIGNRVRSQFADPQTVSVDHASFDAVEAVIDTAKATDAGYLIGLGGGKPIDTAKMASDRLGCGFVSVPTAASHDGIVSGRSSIPEGDTRHSVAADPPLAVVADTAVLAEAPWELTTAGCADIISNYTAVKDWQLAHRLQDVEYSEYAGALSQMTAEMLVDNSDAIKQGFEESAWLVAKALVSSGVAMSIAGSSRPASGAEHLISHQLDRLVPDAALHGHQVGVASIVTAYLHTGENGEWEDIRAALADVGAPTTATELGIDEEIFIQAITSAHAIRDRHTILGNGVSEAAAREAAVFTDVC

Annotated regions:
Protein sequence:
NKSKKRRNRVSFLGAATVEPPKPIPLTWKTEKPVWVNQWPLPKQKLEALHLLANEQLEKGHIEPSFSPWNSPVFVIQKKSGKWRMLTDLRAVNAVIQPMGPLQPGLPSPAMIPKDWPLIIIDLKDCFFTIPLAEQDCEKFAFTIPAINNKEPATRFQWKVLPQGMLNSPTICQTFVGRALQPVREKFSDCYIIHYIDDILCAAETKDKLIDCYTFLQAEVANAGLAIASDKIQTSTPFHYLGMQIENRKIKPQKIEIRKDTLKALNDFQKLLGDINWIRPTLGIPTYAMSNLFSILRGDSDLNSKRMLTPEATKEIKLVEEKIQSAQINRIDPLAPLQLLIFATAHSPTGIIIQNTDLVEWSFLPHSTVKTFTLYLDQIATLIGQTRLRIIKLCGNDPDKIVVPLTKEQVRQAFINSGAWQIGLANFVGIIDNHYPKTKIFQFLKLTTWILPKITRREPLENALTVFTDGSSNGKAAYTGPKERVIKTPYQSAQRAELVAVITVLQDFDINIISDSAYVVQATRDVETALIKYSMDDQLNQLFNLLQQTVRKRNFPFYITHIRAHTNLPGPLTKANKQADLLVSSALIKAQELHALTHVNAAGLKNKFDVTWKLAKDIVQHCTQCQVLHLPTQEAGVNPRGLCPNALWQMDVTHVPSFGRLSYVHVTVDTYSHFIWATCHTGESTSHVKKHLLSCFAVMGVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLVKQKEGGDSKECTTPQMQLNLALYTLNFLNIYRNQTTTSAEQHLTGKKNSPHEGKLIWWKDNKNKTWEIGKVITWGRGFACVSPGENQLPVWIPTRHLKFYNEPIRDAKKSTSAETETPQSSTVDSQDEQNGDVRRTDEVAIHQEGRAANLGTTKEADAVSYKISREHKGDTNPREYAACSLDDCINGGKSPYACRSSCS

Annotated regions:
phrase: KLIWWKDNKNKTWEIGKVITWGRGFACVSPGENQLPVWIPTRHLKFYN
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: IQKKSGKWRMLTDLRAVNAVIQPMGPLQPGLPSPAMIPKDWPLIIIDLKDCFFTIPLAEQDCEKFAFTIPAINNKEPATRFQWKVLPQGMLNSPTICQTFVGRALQPVREKFSDCYIIHYIDDILCAAETKDKLIDCYTFLQAEVANAGLAIASDKIQTSTPFHYLGMQ
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: LEKGHIEPSFSPWNSPVFVIQKKSGKWRMLTDLRAVNAVIQPMGPLQPGLPSPAMIPKDWPLIIIDLKDCFFTIPLAEQDCEKFAFTIPAINNKEPATRFQWKVLPQGMLNSPTICQTFVGRALQPVREKFSDCYIIHYIDDILCAAETKDKLIDCYTFLQAEVANAGLAIASDKIQTSTPFHYLGMQ
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: WKDNKNKTWEIGKVITWGRGFACVSPGENQLPVWIPTRHL
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: PQKIEIRKDTLKALNDFQKLLGDINWIRPTLGIPTYAMSNLFSILRGDSDLNSKRMLTPEATKEI
type: DOMAIN
name: RVT_thumb
description: Reverse transcriptase thumb

phrase: CPNALWQMDVTHVPSFGRLSYVHVTVDTYSHFIWATCHTGESTSHVKKHLLSCFAVMGVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYN
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: LENALTVFTDGSSNGKAAYTGPKERVIKTPYQSAQRAELVAVITVLQDFDINIISDSAYVVQATRDVETALIKYSMDDQLNQLFNLLQQTVRKRNFPFYITHIRAHTNLPGPLTKANKQADLLVSSAL
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: SALIKAQELHALTHVNAAGLKNKFDVTWKLAKDIVQHCTQC
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: AQELHALTHVNAAGLKNKFDVTWKLAKDIVQHCTQCQ
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: RGLCPNALWQMDVTHVPSFGRLSYVHVTVDTYSHFIWATCHTGESTSHVKKHLLSCFAVMGVPEKIKTDNGPGYCSKAFQKFLSQWKISHTTGIPYNSQGQAIVERTNRTLKTQLVKQKEGGDSKECTTPQMQLNLALYTLNFLNIYRNQTTTSAEQHLTG
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: NALTVFTDGSSNGKAAYTGPKERVIKTPYQSAQRAELVAVITVLQDFDINIISDSAYVVQATRDVETALIKYSMDDQLNQLFNLLQQTVRKRNFPFYITHIRAHTNLPGPLTKANKQADLLVSS
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain
Protein sequence:
MYIKVLSVTDINNYIKNTMDNDFILNNASIRGEISNFKIHSSGHVYFSMKDQWSKINCVMFRSAAKGLKFLPEDGMKIIANGRISAYVKDGSYQLYCDKLELEGLGELYIAFEKLKNKLEKEGLFKEECKKSLPQYAKKIGVITSETGAAIRDIINVATRRNKNCEILIYPSLVQGTNASSDIIKGIKELNKVKDLDVIILARGGGSIEELWVFNDEELAREIFKSKVPIITGVGHETDFTIADFVSDKRAPTPSAAAEIAIKDLQELNSRLENYKNALNYYVLNNLKEKYNKLDRLKLSMEGNSPERIIINEYNKIDFIINKLNSYIKIEVDKRKEELSRMSILLSSNNPLNILNKGYSVIQDGTGKVINTIKELDKEKKVTINLKDGKKEYQIQ

Annotated regions:
phrase: IRGEISNFKIHSSGHVYFSMKDQWSKINCVMFRSAAKGLKFLPEDGMKIIANGRISAYVKDGSYQLYCDKLELE
type: DOMAIN
name: OB-fold_nuc-bd_dom
description: OB-fold nucleic acid binding domain

phrase: LSVTDINNYIKNTMDNDFILNNASIRGEISNFKIHSSGHVYFSMKDQWSKINCVMFRSAAKGLKFLPEDGMKIIANGRISAYVKDGSYQLYCDK
type: DOMAIN
name: OB-fold_nuc-bd_dom
description: OB-fold nucleic acid binding domain

phrase: NLKEKYNKLDRLKLSMEGNSPERIIINEYNKIDFIINKLNSYIKIEVDKRKEELSRMSILLSSNNPLNILNKGYSVIQDGTGKVINTIKELDKEKKVTINLKDGKK
type: DOMAIN
name: Exonuc_VII_lsu_C
description: Exonuclease VII, large subunit, C-terminal

phrase: LFKEECKKSLPQYAKKIGVITSETGAAIRDIINVATRRNKNCEILIYPSLVQGTNASSDIIKGIKELNKVKDLDVIILARGGGSIEELWVFNDEELAREIFKSKVPIITGVGHETDFTIADFVSDKRAPTPSAAAEIAIKDLQELNSRLENYKNALNYYVLNNLKEKYNKLDRLKLSMEGNSPERIIINEYNKIDFIINKLNSYIKIEVDKRKEELSRM
type: DOMAIN
name: Exonuc_VII_lsu_C
description: Exonuclease VII, large subunit, C-terminal
Protein sequence:
MRHRKSGRHLSRTSSHRKAMFQNMAVSLFEHELIKTTLPKAKELRRVAEPLITLAKEDSVANRRLAFDRTRSKEIVGKLFNDLGKRYATRQGGYLRILKCGFRAGDNAPMAYVELVDRPIGGSVEAAE

Annotated regions:
phrase: IKTTLPKAKELRRVAEPLITLA
type: CONSERVED_SITE
name: Ribosomal_bL17_CS
description: Large ribosomal subunit protein bL17, conserved site
Protein sequence:
METPKLSVEAIEKGTVIDHIPAGRGLTILRQFKLLHYGNAVTVGFNLPSKTQGSKDIIKIKGVCLDDKAADRLALFAPEAVVNTIDHFKVVQKRHLNLPDEIAEVFRCPNTNCASHGEPVKSRFYVKKHNGQTRLKCHYCEKTYSRDSVAEA

Annotated regions:
phrase: LSVEAIEKGTVIDHIPAGRGLTILRQFKLLHYGNAVTVGFNLPSKTQGSKDIIKIKGVCLDDKAADRLALFAPEAVVNTIDHFKVVQKRH
type: DOMAIN
name: Asp_carbamoyltransf_reg_N
description: Aspartate carbamoyltransferase regulatory subunit, N-terminal

phrase: EIAEVFRCPNTNCASHGEPVKSRFYVKKHNGQTRLKCHYCEKTYSRDS
type: DOMAIN
name: Asp_carbamoyltrfase_reg_C
description: Aspartate carbamoyltransferase regulatory subunit, C-terminal
Protein sequence:
MTDTPSASDAEAPLRQAAPLWGAALIKDEVTRLPDAPGVYRMIGEADEVLYVGKAKSLKKRVVQYAQGRFHTNRIANMVDATRAMEFITTRTEADALLLEINLIKQLKPRFNVLLRDDKSFPEIVIRRDHDAPQLRKHRGAHTIKGDYFGPFASAWAVNRTLNTLQKAFLLRSCSDSVYDSRDRPCMLYQIKRCAAPCTGLIGKDDYQALVDQAEAFLRGKSRAVMATMAKAMEEAAEELEFERAARLRDRIRALSAVAQETQINPETVEEADVVALHVEGGQACVQVFFFRAGQNWGNRAYFPRITGAADDPEDETVTEEQRIITAFLGQFYDDKPIPRLILANVQPAESELLSEAFALKSGRKVEIAVPKRGEKADLVQHVLTNAREALGRKMAEGSAQTKLLAGVAEAFKLDAPPERIEVYDNSHIQGANAVGGMIVAGPEGFMKGQYRKFNIKSTELTPGDDYGMMKEVLRRRFARLVKEEEEGDDANRPDLVLVDGGQGQLDAAIEIMADLGVDDIAVVGVAKGPDRDAGLERFFIPGQTPFMLEPKSPVLYYLQRLRDEAHRFAIGAHRTRRSMDLKKNPLDEIEGVGPGRKKALLHAFGSAKGVGRASVEDLVKVDGVSQALAERIFGFFRKG

Annotated regions:
phrase: APGVYRMIGEADEVLYVGKAKSLKKRVVQYAQGRFHTNRIANMVDATRAMEFITTRTEADALLLEINLIKQLKPRFNVLLR
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: EAFKLDAPPERIEVYDNSHIQGANAVGGMIVAGPEGFMKGQYRKFNIKSTELTPGDDYGMMKEVLRRRFARLVKEEEEGDDANRPDLVLVDGGQGQLDAAIEIMADLGVDDIAVVGVAKGPDRDAGLERFFIPGQTPFMLEPKSPVLYYLQRLRDEAHRFA
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: PGVYRMIGEADEVLYVGKAKSLKKRVVQYAQGRFHTNRIANMVDATRAMEFITTRTEADALLLEINLIKQLKP
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: RAVMATMAKAMEEAAEELEFERAARLRDRIRALSA
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: NPLDEIEGVGPGRKKALLH
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: EDLVKVDGVSQALAERIFG
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: DAPGVYRMIGEADEVLYVGKAKSLKKRVVQYAQGRFHTNRIANMVDATRAMEFITTRTEADALLLEINLIKQLKPRFN
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: VVALHVEGGQACVQVFFFRAGQNWGNRAYFPRITGAADDPEDETVTEEQRIITAFLGQFYDDKPIPRLILANVQPAESELLSEAFALKSGRKVEIAVPKRGEKADLVQHVLTNAREALGRKMAEGSAQTKLLAGVAEAFKLDAPPERIEVYDNSHIQGANAVGGMIVAGPEGFMKGQYRKFNIKSTELTPGDDYGMMKEVLRRRFARLVKEEEEGDDANRPDLVLVDGGQGQLDAAIEI
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: LPDAPGVYRMIGEADEVLYVGKAKSLKKRVVQYAQGRFHTNRIANMVDATRAMEFITTRTEADALLLEINLIKQLKPRFN
type: DOMAIN
name: GIY-YIG_UvrC_Cho
description: UvrC/Cho-like, GIY-YIG domain

phrase: MATMAKAMEEAAEELEFERAARLRDRIRALS
type: DOMAIN
name: UVR_dom
description: UVR domain
Protein sequence:
MCKGGNKVNKIKVRFAPSPTGPLHIGGARSALFNYLFASRYNGEMVLRIEDTDLERSRREYESEIIDSLKWLGLGWSEGIDTGGPNEPYRQTERLAIYQEYTKKLLEAGQAYYCFCSEKELEVERQDLLDSGQMQKYSGKCRQLSMAEREEKLKQGIKPAIRFKVPAHQLHIVDDLVRGRVSFDSDDIGDFIIVKSDGIPTYNFAVVIDDVLMGISHVIRAEEHLSNTPRQLMIYDALNFRRPEFAHISLILGSDRQKMSKRHGATSLVQYREMGYLPEALFNFLALMGWSPEGEEEILSPAEITAAFSLERVAKSPAVFDINKLNFINQQYLKKIGDEELKEMLKPYLADSKYLKKIEQMGEERYELLVSTIRDYLVCLADVKEQLEVFFGDIDYAGDAREVLAGEGVIPLLQAFKEGIHKVNKVEEIKQLIKGITKTLKLKPRDVFMPLRCALSGQAHGPDLSSYIAVIGGEEAIRRIDRAIDFIKSQ

Annotated regions:
phrase: PSPTGPLHIGG
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: KIKVRFAPSPTGPLHIGGARSALFNYLFASRYNGEMVLRIEDTDLERSRREYESEIIDSLKWLGLGWSEGIDTGGPNEPYRQTERLAIYQEYTKKLLEAGQAYYCFCSEKELEVERQDLLDSGQMQKYSGKCRQLSMAEREEKLKQGIKPAIRFKVPAHQLHIVDDLVRGRVSFDSDDIGDFIIVKSDGIPTYNFAVVIDDVLMGISHVIRAEEHLSNTPRQLMIYDALNFRRPEFAHISLILGSDRQKMSKRHGATSLVQYREMGYLPEALFNFLALMGWSPEGEEEILSPAEITAAFSLERVAKSPAVFDINKLNFINQQYLK
type: DOMAIN
name: GluRS_core
description: Glutamyl-tRNA synthetase

phrase: KIKVRFAPSPTGPLHIGGARSALFNYLFASRYNGEMVLRIEDTDLERSRREYESEIIDSLKWLGLGWSEGIDTGGPNEPYRQTERLAIYQEYTKKLLEAGQAYYCFCSEKELEVERQDLLDSGQMQKYSGKCRQLSMAEREEKLKQGIKPAIRFKVPAHQLHIVDDLVRGRVSFDSDDIGDFIIVKSDGIPTYNFAVVIDDVLMGISHVIRAEEHLSNTPRQLMIYDALNFRRPEFAHISLILGSDRQKMSKRHGATSLVQYREMGYLPEALFNFLALMGWSPEGEEEILSPAEITAAFSLERVAKSPAVFDINKL
type: DOMAIN
name: Glu/Gln-tRNA-synth_Ib_cat-dom
description: Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain

phrase: LKEMLKPYLADSKYLKKIEQMGEERYELLVSTIRDYLVCLADVKEQLEVFFGDIDYAGDAREVLAGEGVIPLLQAFKEGIHKVNKVEEIKQLIKGITKTLKLKPRDVFMPLRCALSGQAHGPDLSSYIAVIGGEEAIRRIDRA
type: DOMAIN
name: aa-tRNA-synth_I_cd-bd
description: Aminoacyl-tRNA synthetase, class I, anticodon-binding
Protein sequence:
MLNDKDLSTWQTFRRLWPMISPFKAGLAVAAIALIINAAGDTLMLSLLKPLLDEGFGKADRSVLLWMPLVVIGLMLVRGASGFVSSYCVSWVSGKVVMNMRRRLFSHIMGMPVAFFDQQSTGTLLSRITYDSEQVAASSSGALITVVREGASIIGLFILMFYYSWQLSIILIVIAPIVSIAMRMVSKRFRSISKNMQDTMGHVTTSTEQMLKGHKEVLMFGGQDVETKRFEQVSNRMRQQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMETLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDMEQERDTGKREIERAKGELEFRQVNFAYPARENLALKNINLHIPVGKTVALVGRSGSGKSTIASLITRFYDIQSGEILLDGHDLREYRLSSLRNQVALVSQNVHLFNDTIANNIAYARNENYSREEIERAAKMAYAMDFINKMEHGLDTVIGENGVMLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKDRTALVIAHRLSTIEKADEILVVEDGRIIERGNHTALLATNGAYAQLHRMQFGE

Annotated regions:
phrase: LSGGQRQRIAIARA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: AVAAIALIINAAGDTLMLSLLKPLLDEGFGKADRSVLLWMPLVVIGLMLVRGASGFVSSYCVSWVSGKVVMNMRRRLFSHIMGMPVAFFDQQSTGTLLSRITYDSEQVAASSSGALITVVREGASIIGLFILMFYYSWQLSIILIVIAPIVSIAMRMVSKRFRSISKNMQDTMGHVTTSTEQMLKGHKEVLMFGGQDVETKRFEQVSNRMRQQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMETLTAGTITVVFSSMIALMRPLKSLTNVNAQFQ
type: DOMAIN
name: ABC1_TM_dom
description: ABC transporter type 1, transmembrane domain

phrase: VGKTVALVGRSGSGKSTIASLITRFYDIQSGEILLDGHDLREYRLSSLRNQVALVSQNVHLFNDTIANNIAYARNENYSREEIERAAKMAYAMDFINKMEHGLDTVIGENGVMLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKDRTALVIAHRLSTIEKADEILVVEDG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: AVAAIALIINAAGDTLMLSLLKPLLDEGFGKADRSVLLWMPLVVIGLMLVRGASGFVSSYCVSWVSGKVVMNMRRRLFSHIMGMPVAFFDQQSTGTLLSRITYDSEQVAASSSGALITVVREGASIIGLFILMFYYSWQLSIILIVIAPIVSIAMRMVSKRFRSISKNMQDTMGHVTTSTEQMLKGHKEVLMFGGQDVETKRFEQVSNRMRQQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMETLTAGTITVVFSSMIALMRP
type: DOMAIN
name: ABC1_TM_dom
description: ABC transporter type 1, transmembrane domain

phrase: LEFRQVNFAYPARENLALKNINLHIPVGKTVALVGRSGSGKSTIASLITRFYDIQSGEILLDGHDLREYRLSSLRNQVALVSQNVHLFNDTIANNIAYARNENYSREEIERAAKMAYAMDFINKMEHGLDTVIGENGVMLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKDRTALVIAHRLSTIEKADEILVVEDGRIIERGNHTALLATNGAYAQLHR
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: LKNINLHIPVGKTVALVGRSGSGKSTIASLITRFYDIQSGEILLDGHDLREYRLSSLRNQVALVSQNVHLFNDTIANNIAYARNENYSREEIERAAKMAYAMDFINKMEHGLDTVIGENGVMLSGGQRQRIAIARALLRDSPILILDEAT
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain
Protein sequence:
MASGSKASVPADSFRTISPDRRGEKSASAVSGDTAAATTLKGTAIPVRSVVASPRPVKGKAGRETARLRLQRLPAAQAEDTGEAAAAAAEEPLLPVPEDEEEAQPLPPVCVSRMRGMWRDEKVSLYCDEVLQDCKAEDADEVMGKYLSEKLKLKDKWLGVWKTNPSVFFVKYEEASIPFVGILVEVTCEPYQDSSSRFKVTVSVAEPFSSNIANIPRDLVDEILEELEHSVPLLEVYPVEGQDTDIHVIALALEVVRFFYDFLWRDWDDEESCENYTALIEERINLWCDIQDGTIPGPIAQRFKKTLEKYKNKRVELIEYQSNIKEDPSAAEAVECWKKYYEIVMLCGLLKMWEDLRLRVHGPFFPRILRRRKGKREFGKTITHIVAKMMTTEMIKDLSSDTLLQQHGDLDLALDNCYSGDTVIIFPGEYQAANLALLTDDIIIKGVGKREEIMITSEPSRDSFVVSKADNVKLMHLSLIQQGTVDGIVVVESGHMTLENCILKCEGTGVCVLTGAALTITDSEITGAQGAGVELYPGSIAILERNEIHHCNNLRTSNSSKSTLGGVNMKVLPAPKLKMTNNHIYSNKGYGVSILQPMEQFFIVAEEALNKRASSGDKKDDKMLFKVMQNLNLEMNNNKIEANVKGDIRIVTS

Annotated regions:
phrase: GIVVVESGHMTLENCILKCEGTGVCVLTGAALTITDSEITGAQGAGVELYPGSIAILERNEIHHCNNLRTSNSSKSTLGGVNMKVLPAPKLKMTNNHIYSNKGYGVSILQPMEQFFIVAEEALNKRASSGDKKDDKMLFKVMQNLNLEMNNNKIEANVKGDIRI
type: DOMAIN
name: Beta_helix
description: Right handed beta helix domain

phrase: REFGKTITHIVAKMMTTEMIKDLSSDTLLQQHGDLDLALDNCYSGDTVIIFPGEYQAANLALLTDDIIIKGVGKREEIMITSEPSRDSFVVSKADNVKLMHLSLIQQGTVDGIVVVESGHMTLENCILKCEGTGVCVLTGAALTITDSEITGAQGAGVEL
type: DOMAIN
name: Carb-bd_sugar_hydrolysis-dom
description: Carbohydrate-binding/sugar hydrolysis domain

phrase: GSIAILERNEIHHCNNLRTSNSSKSTLGGVNMK
type: REPEAT
name: PbH1
description: Parallel beta-helix repeat

phrase: GAALTITDSEITGAQGAGVELY
type: REPEAT
name: PbH1
description: Parallel beta-helix repeat

phrase: APKLKMTNNHIYSNKGYGVSIL
type: REPEAT
name: PbH1
description: Parallel beta-helix repeat

phrase: SGHMTLENCILKCEGTGVCVL
type: REPEAT
name: PbH1
description: Parallel beta-helix repeat
Protein sequence:
MTAVPAHDHHTLQDFIERHQRLFVLTGAGCSTDSGIPDYRDLQGGWKRPQPVTFQAFMGELSTRQRYWARSLVGWPRFGLAQPNATHHALAALEARGQLEVLLTQNVDRLHQAAGSQAVIDLHGRLDVVRCMGCERRMPRTEFQVLLEQANPGWAALEAAQAPDGDADLDDVAFEHFVVPPCPVCGGVLKPNVVFFGENVPRARVERAFAHLQAADAVLVVGSSLMVYSGFRFVQTAARNGLPIAALNFGRTRADELLTLKVEQSCAQALAFLHAPPHLPRARSVNDASARSA

Annotated regions:
phrase: PAHDHHTLQDFIERHQRLFVLTGAGCSTDSGIPDYRDLQGGWKRPQPVTFQAFMGELSTRQRYWARSLVGWPRFGLAQPNATHHALAALEARGQLEVLLTQNVDRLHQAAGSQAVIDLHGRLDVVRCMGCERRMPRTEFQVLLEQANPGWAALEAAQAPDGDADLDDVAFEHFVVPPCPVCGGVLKPNVVFFGENVPRARVERAFAHLQAADAVLVVGSSLMVYSGFRFVQTAARNGLPIAALNFGRTRADELLTLKVEQSCAQALAFLHAPPHLPR
type: DOMAIN
name: Ssirtuin_cat_dom
description: Sirtuin family, catalytic core domain
Protein sequence:
MGEKPWQPLLQSFEKLSNCVQTHLSNFIGIKNTPPSSQSTIQNPIISLDSSPPIATNSSSLQKLPLKDKSTGPVTKEDLGRATWTFLHTLAAQYPEKPTRQQKKDVKELMTILSRMYPCRECADHFKEILRSNPAQAGSQEEFSQWLCHVHNTVNRSLGKLVFPCERVDARWGKLECEQKSCDLHGTSMDF

Annotated regions:
phrase: RATWTFLHTLAAQYPEKPTRQQKKDVKELMTILSRMYPCRECADHFKEILRSNPAQAGSQEEFSQWLCHVHNTVNRSLGKLVFPCERVDAR
type: DOMAIN
name: ERV/ALR_sulphydryl_oxidase
description: ERV/ALR sulfhydryl oxidase domain

phrase: GPVTKEDLGRATWTFLHTLAAQYPEKPTRQQKKDVKELMTILSRMYPCRECADHFKEILRSNPAQAGSQEEFSQWLCHVHNTVNRSLGKLVFPCERVDAR
type: DOMAIN
name: ERV/ALR_sulphydryl_oxidase
description: ERV/ALR sulfhydryl oxidase domain