nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MEDDSLYLGGEWQFNHFSKLTSPRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYLNASLQCLTYTPPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYPCGLCLQRAPASNTLTLHTSAKVLILVLKRFCDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGYYFSYVKAQEGQWYKMDDAEVTACSITSVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRPATQGELKRDHPCLQVPELDEHLVERATEESTLDHWKFPQEQNKMKPEFNVRKVEGTLPPNVLVIHQSKYKCGMKNHHPEQQSSLLNLSSMNSTDQESMNTGTLASLQGRTRRSKGKNKHSKRSLLVCQ

Annotated regions:
phrase: GLQNMGNTCYLNASL
type: CONSERVED_SITE
name: USP_CS
description: Ubiquitin specific protease, conserved site

phrase: AGLQNMGNTCYLNASLQCLTYTPPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYPCGLCLQRAPASNTLTLHTSAKVLILVLKRFCDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGYYFSYVKAQEGQWYKMDDAEVTACSITSVLSQQAYVLF
type: DOMAIN
name: Peptidase_C19_UCH
description: Peptidase C19, ubiquitin carboxyl-terminal hydrolase

phrase: AGLQNMGNTCYLNASLQCLTYTPPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYPCGLCLQRAPASNTLTLHTSAKVLILVLKRFCDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGYYFSYVKAQEGQWYKMDDAEVTACSITSVLSQQAYVLFYIQ
type: DOMAIN
name: USP_dom
description: Ubiquitin specific protease domain
Protein sequence:
MASAKATMGQGEQDHFVLKSGHAMPAVGLGTWRAGSDTAHSVRTAITEAGYRHVDTAAEYGVEKEVGKGLKAAMEAGIDRKDLFVTSKIWCTNLAPERVRPALENTLKDLQLDYIDLYHIHWPFRLKDGAHMPPEAGEVLEFDMEGVWKEMENLVKDGLVKDIGVCNYTVTKLNRLLRSAKIPPAVCQMEMHPGWKNDKIFEACKKHGIHVTAYSPLGSSEKNLAHDPVVEKVANKLNKTPGQVLIKWALQRGTSVIPKSSKDERIKENIQVFGWEIPEEDFKVLCSIKDEKRVLTGEELFVNKTHGPYRSAADVWDHEN

Annotated regions:
phrase: MENLVKDGLVKDIGVCN
type: CONSERVED_SITE
name: Aldo/ket_reductase_CS
description: Aldo/keto reductase, conserved site

phrase: GYRHVDTAAEYGVEKEV
type: CONSERVED_SITE
name: Aldo/ket_reductase_CS
description: Aldo/keto reductase, conserved site

phrase: IPKSSKDERIKENIQ
type: CONSERVED_SITE
name: Aldo/ket_reductase_CS
description: Aldo/keto reductase, conserved site

phrase: VGLGTWRAGSDTAHSVRTAITEAGYRHVDTAAEYGVEKEVGKGLKAAMEAGIDRKDLFVTSKIWCTNLAPERVRPALENTLKDLQLDYIDLYHIHWPFRLKDGAHMPPEAGEVLEFDMEGVWKEMENLVKDGLVKDIGVCNYTVTKLNRLLRSAKIPPAVCQMEMHPGWKNDKIFEACKKHGIHVTAYSPLGSSEKNLAHDPVVEKVANKLNKTPGQVLIKWALQRGTSVIPKSSKDERIKENIQVFGWEIPEEDFKVLCS
type: DOMAIN
name: NADP_OxRdtase_dom
description: NADP-dependent oxidoreductase domain
Protein sequence:
MDALQEYSHNSFDLQCLLNSFPGDLEFKQIFSDIGEQMEQNAASIEHCIEEIQSEVNKLCPDAQLQTTSDCFKWLTSYNYNLSKSPSISHGDLINFLKTMKDLLNNEDNHEEMILDLLWDLSCQSSISFLSSLGGTTFCHLSRTSIHSVEDFSSVDVKSVWDDVRLHLRRFLVNRLERYNEINNSQQKIELKSQCMKQFLLLYSESEVLVKYQSIQKRLLDTFLQDSFPSCNRESDLERIVCGYQSTMLMLYSMIKEDFNVLCEILAPSSLVQFFNETYLDTVTEEMTKILEYFCELQFKENAVPVVKTSKSCNKRRGAVHALVSPECSQKERRPSLSLEELRFLSQLTESFVKLENSIQELFAETLSLLQMPRSSPGILEKSKKEVMVEKLIANENNKPPEALLPVKEATLLEFGWRNAFKEVPLAIAHCISAAIEGFSTQVLQQEQTERTSSVSYTINLVNVPQLCPEGHIFPEEEQPKRVAKFCSDIIEKLDTMLLLALACRDDSPQEIKENLVEAYSKVATAVLERLQERGKEVPSRAPLKNLHSILSSATYVSQRFTHYDNLMKETTKKPIFLVPVQRYQEFINTVQFQVTDYCARVCAMSILQDAESHHWDDYKAFYEGERCSFAIQMWHYFSLALHHDLWTILPPKLAQEILAEMLEKSLGLLASRYARAHPSPKRTAQIRLDVMAILIFTENMLWSICSSGQEILNPHKFNNHKIFKIHTHCNNLFTTLAILTSPLTELYKTFQHGVDESPSNSLTPLFNQPLHWISCMSQFYPSLLRPPSVGGLTAQGQLKLLLSQPCCKWNLLLDTLLHSGGLIPRILLKSSKQAAGMESKQSAGGSLVGAIFEVLYHCHLSSQTFGNVFMSHMEEEQLWDFLFNIPVSSFTESQPEVIHCLRLALMDSVKDTVQQIISIMRCRRNSETNLNKPRVPDHLLQSIPQGWNYIPRDSRGKESNKGITELAAQAVSIVLSKLPTVIACLPPTIKYFFFLSERKMSKNLAELKKAGLLVWNLIIIICRIFEDGNTVERLTGSSLDRWSKEKLGLICLCLESILGKQSNPSQLTQKVILSIERQKPNWMEQQLLKARTLSIQCAFTRMEENSGSEGEAALELTEQKTNAMVLDLCHKPGGSKYLQQIYHIMQLNEEYLKEQLFAMNGSEEKPLLIRPLKVALRDEDQPPAFNPFHVHKVVSESMLDQVATVTWCCDWSNLLPNYLGLNKMTFGALFKNRWEMRKDETLEEKEKMMLEHLKQNCTIQDFSTSDSKTEQ

Annotated regions:
Protein sequence:
MAWSPLFLTLITHCAGSWAQSVLTQPPSVSEAPRQRVTISCSGSSSNIGNNAVNWYQQLPGKAPKLLIYYDDLLPSGVSDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLNG

Annotated regions:
phrase: PLFLTLITHCAGSWAQSVLTQPPSVSEAPRQRVTISCSGSSSNIGNNAVNWYQQLPGKAPKLLIYYDDLLPSGVSDRFSGSKSGTSASLAISGLQSEDEADYYCAAWDDSLN
type: DOMAIN
name: Ig-like_dom
description: Immunoglobulin-like domain

phrase: RVTISCSGSSSNIGNNAVNWYQQLPGKAPKLLIYYDDLLPSGVSDRFSGSKSGTSASLAISGLQSEDEADYYCA
type: DOMAIN
name: Ig_V-set
description: Immunoglobulin V-set domain

phrase: TQPPSVSEAPRQRVTISCSGSSSNIGNNAVNWYQQLPGKAPKLLIYYDDLLPSGVSDRFSGSKSGTSASLAISGLQSEDEADYYCAAWD
type: DOMAIN
name: Ig_V-set
description: Immunoglobulin V-set domain
Protein sequence:
MLEGRILAVSTQTKAVAGIPGAPKRVSFAKIREPLEVPGLLDLQTESFAWLIGSPEWRERAAARGDVGLVGGLEEVLEELSPIEDFSGSMSLSFSDPRFEEVKASIDECKEKDMTYAAPLFVTAEFINNNTGEIKSQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVYFDHSIDKGTEKDLHSVRVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTTEEIAERFGFSEIMMSTLEKDNTAGQDEALLDIYRKLRPGEPPTKESAQTLLENLFFKEKRYDLARVGRYKINKKLGIHVGEPVTGSVLTKEDIVTTIEYLVRLHAGDKTMTAPGGVEVPVEVDDIDHFGNRRLRTVGELIQNQIRVGLSRMERVVRERMTTQDVEAITPQTLINIRPVVAAIKEFFGTSQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGLEVRDVHPSHYGRMCPIETPEGPNIGLIGSLSVYARVNPFGFIETPYRKVVDGRVTDEVVYLTADEEDRHVRAQANSPVGPDGRFLEDRVLCRRGNEEMEYVAATEVDFMDVSPRQMVSVATAMIPFLEHDDANRALMGANMQRQAVPLIRSEAPIVGTGMELRAAVDAGDVVVNEKAGVVEEVSADYVTVMADDGTRKSYRMRKFNRSNQGTCSNQRPIVDEGQRVEAGQVLADGPCTENGEMALGKNLLVAIMPWEGHNYEDAIILSQRLVEQDVLTSIHIEEHEIDARDTKLGAEEITRDIPNVSDEVL

Annotated regions:
phrase: RFEEVKASIDECKEKDMTYAAPLFVTAEFINNNTGEIKSQTVFMGDFPMMTDKGTFIINGTERVVVSQLVRSPGVYFDHSIDKGTEKDLHSVRVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTTEEIAERFGFSEIMMSTLEKDNTAGQDEALLDIYRKLRPGEPPTKESAQTLLENLFFKEKRYDLARVGRYKINKKLGIHVGEPVTGSVLTKEDIVTTIEYLVRLHAGDKTMTAPGGVEVPVEVDDIDHFGNRRLRTVGELIQNQIRVGLSRMERVVRERMTTQDVEAITPQTLINIRP
type: DOMAIN
name: RNA_pol_bsu_protrusion
description: RNA polymerase, beta subunit, protrusion

phrase: QFMDQNNPLSGLTHKRRLSALGPGGLSRERAGLEVRDVHPSHYGRMCPIETPEGPNIGLIGSLSVYAR
type: DOMAIN
name: RNA_pol_Rpb2_3
description: RNA polymerase Rpb2, domain 3

phrase: KAGVVEEVSADYVTVMADDGTRKSYRMRKFNRSNQGTCSNQRPIVDEGQRVEAGQVLADGPCTENGEMALGKNLLVAIMPWEGHNYEDAIILSQRLVEQDVLTSIHIEEHEIDARDTKLGAEEITRDIPNVSD
type: DOMAIN
name: DNA-dir_RNAP_su2_dom
description: DNA-directed RNA polymerase, subunit 2, hybrid-binding domain

phrase: RSPGVYFDHSIDKGTEKDLHSVRVIPSRGAWLEFDVDKRDTVGVRIDRKRRQPVTVLLKALGWTTEEIAERFGFSEIMMSTLEKDNTAGQDEALLDIYRKLRPGEPPTKESAQTLLENLFFKEKRYDLARVGRYKINKKLGIHVGEPVTGSVLTKEDIVTTIEYLVRLHAGDKTMTAPGGVEVPVEVDDIDHFGNRRL
type: DOMAIN
name: RNA_pol_Rpb2_2
description: RNA polymerase Rpb2, domain 2

phrase: YRKVVDGRVTDEVVYLTADEEDRHVRAQANSPVGPDGRFLEDRVLCRRGNEEMEYVAATEVDFMDV
type: DOMAIN
name: DNA-dir_RNA_pol_bsu_external_1
description: DNA-directed RNA polymerase, beta subunit, external 1 domain
Protein sequence:
MHHLHPMIVCIFVMYTGIVGSDAIAGDQLLNIGVIQSKIRSLMYYTDGGASFIVVKLLPNLPPSNGTCNITSLDAYNVTLFKLLTPLIENLSKISTVTDTKTRQKRFAGVVVGLAALGVATAAQITAAVAIVKANANAAAINNLASSIQSTNKAVSDVIDASRTIATAVQAIQDRINGAIVNGITSASCRAHDALIGSILNLYLTELTTIFHNQITNPALTPLSIQALRILLGSTLPIVIESKLNTNFNTAELLSSGLLTGQIISISPMYMQMLIQINVPTFIMQPGAKVIDLIAISANHKLQEVVVQVPNRILEYANELQNYPANDCVVTPNSVFCRYNEGSPIPESQYQCLRGNLNSCTFTPIIGNFLKRFAFANGVLYANCKSLLCRCADPPHVVSQDDTQGISIIDIKRCSEMMLDTFSFRITSTFNATYVTDFSMINANIVHLSPLDLSNQINSINKSLKSAEDWIADSNFFANQARTAKTLYSLSAIALILSVITLVVVGLLIAYIIKLVSQIHQFRSLAATTMFHRENPAFFSKNNHGNIYGIS

Annotated regions:
Protein sequence:
MKSNSQDAASIVWHPQLVTKQARNQSNGHKSRMIWFTGLSGSGKSTIANAVQAELFKRGIQVYVLDGDNLRHGLNADLSFSMEDRKENIRRTAEVGKLFVDAGLVVLAALISPVEEERQRARSRFAEDEFLEVYVSCTLQECEKRDPKGLYKKARKGEIPQFTGIHQPYEEPKNPDICIDTTDRTVEQSVQIILPIILEKIAWKEGEQ

Annotated regions:
Protein sequence:
MEVVDIDARAAKLGIDWSQVNFDSIQLPPGEDFGIESDDEAVYQDDQSEFDTGFGNIIVVDHLPVVPKEKFEKLEGVVKKIYNQLGVIKENGLWMPVDPDTKMTLGYCFIEFNTPQEAQNAKEKSHGYKLDKSHIFAVNMFDDFDRLMNVKEEWEPPQARPYVPGENLQKWLTDEKARDQLVIRSGPDTEVFWNDTRQKAPEPVHKRPYWTESYVQWSPLGTYLVTLHKQGAAVWGGADTFTRLMRYQHSMVKLVDFSPGEKYLVTYHSQEPSNPRDASKVEIKVFDVRTGRMMRDFKGSADEFSIGGPGGVAGASWPVFRWAGGKDDKYFAKLSKNTISVYETETFSLIDKKSMKVDNVVDICWSPTDSILSLFVPEQGGGNQPAKVALVQIPSKVELRQKNLFSVSDCKMYWQSSGEYLAVKVDRYTKTKKSTYSGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVIHGDQPRPDVSFYSMKTAQNTGRVSKLATLKAKQANALFWSPTGKYIILAGLKGFNGQLEFFNVDELETMATAEHFMATDIEWDPTGRYVATAVTSVHEMENGFTIWSFNGIMLYRILKDHFFQLAWRPRPPSFLTAEKEEEIAKTLKKYSKKYEAEDQDVSLLLSEQDREKRKALKEEWEKWVMQWKSLHEEEKLVRQNLRDGEVSDVEEDEYEAKEVEFEDLIDVTEEIVQES

Annotated regions:
phrase: IIVVDHLPVVPKEKFEKLEGVVKKIYNQLGVIKENGLWMPVDPDTKMTLGYCFIEFNTPQEAQNAKEKSHGYKLDKSHIFA
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: NIIVVDHLPVVPKEKFEKLEGVVKKIYNQLGVIKENGLWMPVDPDTKMTLGYCFIEFNTPQEAQNAKEKSHGYKLDKSHIFAVNMFD
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: KKIYNQLGVIKENGLWMPVDPDTKMTLGYCFIEFNTPQEAQNAKEKSHGYKLDK
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: KNLFSVSDCKMYWQSSGEYLAVKVDRYTKTKKSTYSGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVIHGDQPRPDVSFYSMKTAQNTGRVSKLATLKAKQANALFWSPTGKYIILAGLKGFNGQLEFFNVDELETMATAEHFMATDIEWDPTGRYVATAVTSVHEMENGFTIWSFNGIMLYRILKDHFFQ
type: DOMAIN
name: TIF_beta_prop-like
description: Translation initiation factor, beta propellor-like domain

phrase: GNIIVVDHLPVVPKEKFEKLEGVVKKIYNQLGVIKENGLWMPVDPDTKMTLGYCFIEFNTPQEAQNAKEKSHGYKLDKSHIFAV
type: DOMAIN
name: eIF3B_RRM
description: eIF3B, RNA recognition motif
Protein sequence:
MLERTLRVLEYNKVKEQLLEHTASSLGRDKVKHLVPSTDFEEIVEMQDTTDEAAKVIRLKGSAPLGGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPILETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRSSNAQKMLSDSIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQARHPLIDPEVIVPNNIMLGKDFTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHISTDTNKIENMIAKLEESQKNAERDWNEAEALRKQSEKLHRELQRQIIEFNEERDERLLKAQKEGEEKVEAAKKEAEGIIQELRQLRKAQLANVKDHELIEAKSRLEGAAPELVKKQKVNVKNTAPKQQLRAGDEVKVLTFGQKGQLLEKVSDTEWSVQIGILKMKVKESNMEYINTPKQTEKKAVATVKGRDYHVSLELDLRGERFENAMARVEKYLDDAQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVELK

Annotated regions:
phrase: SLELDLRGERFENAMARVEKYLDDAQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVEL
type: DOMAIN
name: Smr_dom
description: Smr domain

phrase: FTTIVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNHI
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: AGDEVKVLTFGQKGQLLEKVSDTEWSVQIGILKMKVKES
type: DOMAIN
name: MSSS
description: MutS2 and Smr-associated SH3 domain

phrase: SLVLFDELGAGTDPQE
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: IVITGPNTGGKTVTLKTVGICVLMAQSGLHIPVMDESEICVFKNIFADIGDEQSIEQSLSTFSSHMVNIVDILEKADFESLVLFDELGAGTDPQEGAALAISILDEVCNRGARVVATTHYPELKAYGYNREQVINASVEFDVNTLSPTYKLLIGVPGRSNAFEISKRLGLSDRVIDQARNH
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: LDLRGERFENAMARVEKYLDDAQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVEL
type: DOMAIN
name: Smr_dom
description: Smr domain

phrase: LDLRGERFENAMARVEKYLDDAQLASYPRVSIIHGKGTGALRQGVQDYLKKHRGVKTFRYGDMGEGGLGVTVVEL
type: DOMAIN
name: Smr_dom
description: Smr domain

phrase: LEYNKVKEQLLEHTASSLGRDKVKHLVPSTDFEEIVEMQDTTDEAAKVIRLKGSAPLGGITDIRSNVKRAKIGSMLSPNELLDIANTMYGSRNMKRFIEDMVDNGVELPILETHVAQIVSLYDLEKKITNCIGDGGEVVDSASDKLRGIRTQIRTAESRIREKLENMTRSSNAQKMLSDSIVTIRNERYVIPVKQEYRGVYGGIVHDQSASGQTLFIEPQVIVELNNALQEARVKEKQEIERILLMLTEEVAVEADIVLSNVEVVANLDFIFAKAFYAKRIKATKPIVNNERYMDLRQARHPLIDP
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core
Protein sequence:
MFKFNDEKGQLKCSFCGKTQTQVRKLVAGPGVYICDECIELCTEIVQEELAKDEEVEFKDVPKPVEIREILDEYVIGQDNAKKALAVAVYNHYKRINSNSKIDDVELAKSNIALIGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGGRKHPHQEFIQIDTTNILFICGGAFDGIEPIIKRRLGEKVIGFGSEKKNADVNEKHVLSHVLPEDLLRFGLIPEFIGRLPVIANLEPLDEDALVDILTKPKNALVKQFQKLLELDDVELEFEEGALIEIAKKAIERKTGARGLRSIIEGLMLEVMFELPSRKDIEKCILTKETVADNAAPKLVLQDGTVLDTKTSA

Annotated regions:
phrase: LDEDALVDILTKPKNALVKQFQKLLELDDVELEFEEGALIEIAKKAIERKTGARGLRSIIEGLMLEVMFELPSRKDIEKCILTKETVADNAAPKLV
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal

phrase: LDEDALVDILTKPKNALVKQFQKLLELDDVELEFEEGALIEIAKKAIERKTGARGLRSIIEGLMLEVMFELPSRKDIE
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal

phrase: MFKFNDEKGQLKCSFCGKTQTQVRKLVAGPGVYICDECIELCTEIVQEELAKD
type: DOMAIN
name: Znf_CppX_C4
description: Zinc finger, ClpX C4-type

phrase: QLKCSFCGKTQTQVRKLVAGPGVYICDECIELCTEIVQE
type: DOMAIN
name: Znf_CppX_C4
description: Zinc finger, ClpX C4-type

phrase: AKSNIALIGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGGRKHPHQEFIQIDTTNILFICGGAFDGIEPIIKRRLGEKVIGFGS
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: KCSFCGKTQTQVRKLVAGPGVYICDECIELCTEIVQ
type: DOMAIN
name: Znf_CppX_C4
description: Zinc finger, ClpX C4-type

phrase: KSNIALIGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENILLKLIQAADYDVEKAEKGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTVASVPPQGGRKHPHQEFIQIDTTNILFICGGAFDGIEPIIKRRLGEKVIGFGSEKKNADVNEKHVLSHVLPEDLLRFGLIPEFIGRLPV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core
Protein sequence:
MASTMVAVGLTLAAAGFTGRYAVRAMKHMEPQVKQALEASKSAFGSGYYRGGFDPKMNRREASLILGVSPTANKTKIREAHRKLMILNHPDRGGSPYLAAKINEAKDLLDGQAKK

Annotated regions:
phrase: ILGVSPTANKTKIREAHRKLMILNHPDRGGSPYLAAKINEAKDLL
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: REASLILGVSPTANKTKIREAHRKLMILNHPDRGGSPYLAAKINEAKDLLDGQA
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: EASLILGVSPTANKTKIREAHRKLMILNHPDRGGSPYLAAKINEAKDLLDGQAK
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: ILGVSPTANKTKIREAHRKLMILNHPDRGGSPYLAAKINEAKDLLDG
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain
Protein sequence:
MPAGMFSIDSILAGRPSCKDSVLLHRNAPVVFSNLTESLYTAAGDFNGLYSHTGPPAPNLQSVNGRIGYNNYYYGQLHVQGPTGPACCGAIPTLGSQQCPCIPTGYDSAGSVLISPVPHQMMSYMNVGTLSRTELQLLNQLHCRRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRRQKRSSSEESENSQKWNKSTKTTSEKIEEGKSDVDSDS

Annotated regions:
phrase: KRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRRQKRS
type: DOMAIN
name: HD
description: Homeodomain

phrase: RRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWR
type: DOMAIN
name: HD
description: Homeodomain

phrase: RRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRRQ
type: DOMAIN
name: HD
description: Homeodomain

phrase: RRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLARKVHLREEKVEVWFKNRRAKWRR
type: DOMAIN
name: HD
description: Homeodomain

phrase: LARKVHLREEKVEVWFKNRRAKW
type: CONSERVED_SITE
name: Homeobox_CS
description: Homeobox, conserved site
Protein sequence:
MLEIVYQDEYLVAVNKPAGMLVHRSWLDKHETEFVMQTLRDQIGQHVFPLHRLDRPTSGVLVFALSSQIASEVMPMFANHEMEKTYHAIVRGWIEEANVLDYPLKEELDKIADKFAKQDKEAQSAVTAYRPLAKVELPIATGKFATTRYCLMEMQPKTGRKHQLRRHMAHLRHPIVGDTTHGDGVHNRLFREHFSAQRLMLHASELRFMHPYTQQPLVIRAGLDEVWQGLLSEFGWQESLLINA

Annotated regions:
phrase: LVAVNKPAGMLVHRSWLDKHETEFVMQTLRDQIGQHVFPLHRLDRPTSGVLVFALSSQIASEVMPMFANHEMEKTYHAIVRGWIEEANVLDYPLKEELDKIADKFAKQDKEAQSAVTAYRPLAKVELPIATGKFATTRYCLMEMQPKTGRKHQLRRHMA
type: DOMAIN
name: PsdUridine_synth_RsuA/RluA
description: Pseudouridine synthase, RsuA/RluA-like

phrase: LHRLDRPTSGVLVF
type: CONSERVED_SITE
name: PsdUridine_synth_RluA-like_CS
description: Pseudouridine synthase, RluA-like, conserved site
Protein sequence:
MSNMQFSRGFNPFVILFCLAVVAPIISADVAILRTDYYQKTCPDFHKIVREAVTTKQVQQPTTAAGTLRLFFHDCFLEGCDASVLIATNSFNKAERDDDLNDSLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPYFDVKLGRKDGFESKAHKVRGNVPMANQTVPDIHGIFKKNGFSLREMVALSGAHTIGFSHCKEFSDRLYGSRADKEINPRFAAALKDLCKNHTVDDTIAAFNDVMTPGKFDNMYFKNLKRGLGLLASDHILIKDNSTKPFVDLYATNETAFFEDFARAMEKLGTVGVKGDKDGEVRRRCDHFNNLNV

Annotated regions:
phrase: LRTDYYQKTCPDFHKIVREAVTTKQVQQPTTAAGTLRLFFHDCFLEGCDASVLIATNSFNKAERDDDLNDSLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPYFDVKLGRKDGFESKAHKVRGNVPMANQTVPDIHGIFKKNGFSLREMVALSGAHTIGFSHCKEFSDRLYGSRADKEINPRFAAALKDLCKNHTVDDTIAAFNDVMTPGKFDNMYFKNLKRGLGLLASDHILIKDNSTKPFVDLYATNETAFFEDFARAMEKLGTVGVKGDKDGEVRRRCDH
type: DOMAIN
name: Secretory_peroxidase
description: Secretory peroxidase

phrase: ILRTDYYQKTCPDFHKIVREAVTTKQVQQPTTAAGTLRLFFHDCFLEGCDASVLIATNSFNKAERDDDLNDSLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPYFDVKLGRKDGFESKAHKVRGNVPMANQTVPDIHGIFKKNGFSLREMVALSGAHTIGFSHCKEFSDRLYGSRADKEINPRFAAALKDLCKNHTVDDTIAAFNDVMTPGKFDNMYFKNLKRGLGLLASDHILIKDNSTKPFVDLYATNETAFFEDFARAMEKLGTVGVKGDKDGEVRRRCDHF
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: AAGTLRLFFHD
type: ACTIVE_SITE
name: Peroxidases_AS
description: Peroxidase, active site

phrase: AAGTLRLFFHDCFL
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: VSCADILAQATRDLVTM
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: GGPYFDVKLGRK
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: EMVALSGAHTIGFSH
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: DVMTPGKFDNMYFKN
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: VREAVTTKQVQQPTTAAGTLRLFFHDCFLEGCDASVLIATNSFNKAERDDDLNDSLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPYFDVKLGRKDGFESKAHKVRGNVPMANQTVPDIHGIFKKNGFSLREMVALSGAHTIGFSHCKEFSDRLYGSRADKEINPRFAAALKDLCKNHTVDDTIAAFNDVMTPGKFDNMYFKNLKRGLGLLASDHILIKDNSTKPFVDLYAT
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: EMVALSGAHT
type: BINDING_SITE
name: Peroxidases_heam-ligand_BS
description: Peroxidases heam-ligand binding site
Protein sequence:
MQILLVEDDNTLFQELKKELEQWDFNVVGVEDFSHVMETFETFNPEIVILDVQLPKYDGFYWCRKMRQQSNVPILFLSSRDNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFGVEEKRTLSWQDATVDLSKDSIQKDDKTIFLSKTEMIILEMLINKRNQIVTRDTLITALWDDEAFVSDNTLTVNVNRLRKKLSEIDMDSAIETKVGKGYLAHE

Annotated regions:
phrase: ILLVEDDNTLFQELKKELEQWDFNVVGVEDFSHVMETFETFNPEIVILDVQLPKYDGFYWCRKMRQQSNVPILFLSSRDNPMDQVMSMELGADDYMQKPFYTNVLIAK
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: TVDLSKDSIQKDDKTIFLSKTEMIILEMLINKRNQIVTRDTLITALWDDEAFVSDNTLTVNVNRLRKKLSEIDMDSAIETKVGKG
type: DOMAIN
name: OmpR/PhoB-type_DNA-bd
description: OmpR/PhoB-type DNA-binding domain

phrase: MQILLVEDDNTLFQELKKELEQWDFNVVGVEDFSHVMETFETFNPEIVILDVQLPKYDGFYWCRKMRQQSNVPILFLSSRDNPMDQVMSMELGADDYMQKPFYTNVLIAK
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: KTIFLSKTEMIILEMLINKRNQIVTRDTLITALWDDEAFVSDNTLTVNVNRLRKKLSEIDMDSAIETKVGKGY
type: DOMAIN
name: OmpR/PhoB-type_DNA-bd
description: OmpR/PhoB-type DNA-binding domain

phrase: KRTLSWQDATVDLSKDSIQKDDKTIFLSKTEMIILEMLINKRNQIVTRDTLITALWDDEAFVSDNTLTVNVNRLRKKLSEIDMDSAIETKVGKGYLAH
type: DOMAIN
name: OmpR/PhoB-type_DNA-bd
description: OmpR/PhoB-type DNA-binding domain

phrase: QILLVEDDNTLFQELKKELEQWDFNVVGVEDFSHVMETFETFNPEIVILDVQLPKYDGFYWCRKMRQQSNVPILFLSSRDNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAI
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: DKTIFLSKTEMIILEMLINKRNQIVTRDTLITALWDDEAFVSDNTLTVNVNRLRKKLSEIDMDSAIETKVGKGYL
type: DOMAIN
name: OmpR/PhoB-type_DNA-bd
description: OmpR/PhoB-type DNA-binding domain
Protein sequence:
RRVPLLLLGILFLASLSASFAISLREHNESQDNPFYFSSDNSWQTLFKNQYGHIRVLQRFDQRSERLQNLEDYRLVEFMSKPETLLLPQQADAEFLLVVRSGSALLALVKPGGTIIYSLKQQDTLKIPAGTIFFLINPENNEDLRIIKLAMTVNNPQIQDFFLSSTEAQQSYLYGFSKHILDASFNSPIEKINRLLFAEEGRQEGVIVNIGSDLIQELSRHAKSSSRKSLDHNSLDISNEWGNLTDIVYNSLDVLLTYVEIKEGGLFVPHYNSKAIVILVVEEGVAKVELVGPKREKESLELETYRADVSEGDVFVIPAAFPFAIKAISNVNFTSFGINANNNYRIFLTGKGGPTGKEDNIISAGINPDVLGLMFPGSGEDVQKLFNNQNLSHFVNGSYHKNAHPHEQEQQKQQKGRKGAFVY

Annotated regions:
phrase: YNSLDVLLTYVEIKEGGLFVPHYNSKAIVILVVEEGVAKVELVGPKREKESLELETYRADVSEGDVFVIPAAFPFAIKAISNVNFTSFGINANNNYRIFLT
type: DOMAIN
name: Cupin_1
description: Cupin 1

phrase: FYFSSDNSWQTLFKNQYGHIRVLQRFDQRSERLQNLEDYRLVEFMSKPETLLLPQQADAEFLLVVRSGSALLALVKPGGTIIYSLKQQDTLKIPAGTIFFLINPENNEDLRIIKLAMTVNNPQIQDFFLSSTEAQQSYLYGFSKHILDASFNSPIEKI
type: DOMAIN
name: Cupin_1
description: Cupin 1

phrase: KSLDHNSLDISNEWGNLTDIVYNSLDVLLTYVEIKEGGLFVPHYNSKAIVILVVEEGVAKVELVGPKREKESLELETYRADVSEGDVFVIPAAFPFAIKAISNVNFTSFGINANNNYRIFLTGKGGPTGKEDNIISAGINPDVLGLMFPGSGEDV
type: DOMAIN
name: Cupin_1
description: Cupin 1
Protein sequence:
MKWSILLLVGCAAAIDVPRQPYAPTGSGKKRLTFNETVVKRAISPSAISVEWISTSEDGDYVYQDQDGSLKIQSIVTNNTQTLVPADKVPEDAYSYWIHPNLSSVLWATNYTKQYRHSYFADYFIQDVQSMNLRPLAPDQSGDIQYAQWSPTGDAIAFVRGNDVFVWTNASTSQITNDGGPDLFNGVPDWIYEEEILGDRFALWFSPDGAYLAFLRFNETGVPTFTVPYYMDNEEIAPPYPRELELRYPKVSQTNPTVELNLLELRTGERTPVPIDAFDAKELIIGEVAWLTEKHDVVAVKAFNRVQDRQKVVAVDVASLRTKTINERDGTDGWLDNLLSMAYIGPIGESKEEYYIDISDQSGWAHLWLFPVAGGEPIALTKGEWEVTAILSIDKPRQLVYFLSTKHHSTERHLYSVSWKTMEITPLVDDTVPAVWSASFSSQGGYYILSYRGPDVPYQDLYAINSTAPLRTITSNAAVLDGLKEYTLPNITYFELALPSGETLNVMQRLPVKFSSKKKYPVLFTPYGGPGAQEVSKAWQALDFKAYIASDPELEYITWTVDNRGTGYKGRAFRCQVTSRLGELEAADQVFAAQQAAKLPYVDADHIAIWGWSYGGYLTGKVIETDSGAFSLGVQTAPVSDWRFYDSMYTERYMKTLESNAAGYNASAIRKVAGYKNVRGGVLIQHGTGDDNVHFQNAAALVDTLVGAGVTPEKLQVQWFTDSDHGIRYHGGNVFLYRQLSKRLYEEKKRKEKGEAHQWSKKSVL

Annotated regions:
phrase: ELEYITWTVDNRGTGYKGRAFRCQVTSRLGELEAADQVFAAQQAAKLPYVDADHIAIWGWSYGGYLTGKVIETDSGAFSLGVQTAPVSDWRFYDSMYTERYMKTLESNAAGYNASAIRKVAGYKNVRGGVLIQHGTGDDNVHFQNAAALVDTLVGAGVTPEKLQVQWFTDSDHGIRYHGGN
type: DOMAIN
name: Peptidase_S9_cat
description: Peptidase S9, prolyl oligopeptidase, catalytic domain

phrase: PNLSSVLWATNYTKQYRHSYFADYFIQDVQSMNLRPLAPDQSGDIQYAQWSPTGDAIAFVRGNDVFVWTNASTSQITNDGGPDLFNGVPDWIYEEEILGDRFALWFSPDGAYLAFLRFNETGVPTFTVPYYMDNEEIAPPYPRELELRYPKVSQTNPTVELNLLELRTGERTPVPIDAFDAKELIIGEVAWLTEKHDVVAVKAFNRVQDRQKVVAVDVASLRTKTINERDGTDGWLDNLLSMAYIGPIGESKEEYYIDISDQSGWAHLWLFPVAGGEPIALTKGEWEVTAILSIDKPRQLVYFLSTKHHSTERHLYSVSWKTMEITPLVDDTVPAVWSASFSSQGGYYILSYRGPDVP
type: DOMAIN
name: Peptidase_S9B_N
description: Dipeptidylpeptidase IV, N-terminal domain
Protein sequence:
MSSAEKSFPVSWDQFHRDARALAWRLSSQRAEWKAIVCITRGGLVPAAIIARELGTRLIETVCVASYHEYTSQGELKVLKEINPALLADGGEGILIVDDLTDTGKTAGIVRAMLPKAHFATVYAKPKGRPLVDTFITEVSQDTWIYFPWDLGLSFQAPIGKETAG

Annotated regions:
phrase: SWDQFHRDARALAWRLSSQRAEWKAIVCITRGGLVPAAIIARELGTRLIETVCVASYHEYTSQGELKVLKEINPALLADGGEGILIVDDLTDTGKTAGIVRAMLPKAHFATVYAKPKGRPLVDTFITEVSQDTWIYFPWDLGLS
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: ARALAWRLSSQRAEWKAIVCITRGGLVPAAIIARELGTRLIETVCVASYHEYTSQGELKVLKEINPALLADGGEGILIVDDLTDTGKTAGIVRAMLPKAHFATVYAKPKG
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain
Protein sequence:
MIKLFNSLTNKKEPFVPIEEGKVKMYCCGPTVYNYIHIGNARPPIVYDMVRRYLTYRGYDVTFVSNFTDVDDKIIRAANELGEEVAAVAERFIKAYYADTCALNVKEADLHPRVTETMDDIIAFIADLEKKGFAYEAGGDVYFRTRKFNGYGKLSGQALDDLQSGARIEVDERKEDPLDFVLWKAAKPNEISWSSPWGEGRPGWHIECSAMIKKSLGDTIDIHAGGKDLTFPHHENEIAQSEALTGKKLANYWMHNGFVNINNEKMSKSLGNFVLAHDIIQQYSPEVVRFFMLTAHYRTPINFSDELLKGAEAGLERLKNTVANLQHRLAETADMGAEEEWLEKIAGAKQRFIEEMDDDFNSANAISVLFDLAKEANIYMSEAQTSKKVLNAFLELFAEFGEVLGVSFTQQEEELLDAEIEALIEERNVARKERNFARADEIRDLLKEKNIVLEDTPQGVRWKRGS

Annotated regions:
phrase: LDAEIEALIEERNVARKERNFARADEIRDLLKEKNIVLEDTPQGVR
type: DOMAIN
name: CysS_C
description: Cysteinyl-tRNA ligase, anticodon binding domain

phrase: KLFNSLTNKKEPFVPIEEGKVKMYCCGPTVYNYIHIGNARPPIVYDMVRRYLTYRGYDVTFVSNFTDVDDKIIRAANELGEEVAAVAERFIKAYYADTCALNVKEADLHPRVTETMDDIIAFIADLEKKGFAYEAGGDVYFRTRKFNGYGKLSGQALDDLQSGARIEVDERKEDPLDFVLWKAAKPNEISWSSPWGEGRPGWHIECSAMIKKSLGDTIDIHAGGKDLTFPHHENEIAQSEALTGKKLANYWMHNGFVNINNEKMSKSLGNFVLAHDIIQQYSPEVVRFFMLTAHYRTPINF
type: DOMAIN
name: tRNA-synt_1_cat_dom
description: tRNA synthetases class I, catalytic domain

phrase: RFIEEMDDDFNSANAISVLFDLAKEANIYMSEAQTSKKVLNAFLELFAEFGEVLGVSFTQQEEEL
type: DOMAIN
name: Cys-tRNA-synt_Ia_DALR
description: Cysteinyl-tRNA synthetase, class Ia, DALR

phrase: FVPIEEGKVKMYCCGPTVYNYIHIGNARPPIVYDMVRRYLTYRGYDVTFVSNFTDVDDKIIRAANELGEEVAAVAERFIKAYYADTCALNVKEADLHPRVTETMDDIIAFIADLEKKGFAYEAGGDVYFRTRKFNGYGKLSGQALDDLQSGARIEVDERKEDPLDFVLWKAAKPNEISWSSPWGEGRPGWHIECSAMIKKSLGDTIDIHAGGKDLTFPHHENEIAQSEALTGKKLANYWMHNGFVNINNEKMSKSLGNFVLAHDIIQQYSPEVVRFFMLTAHYRTPINFSDELLKG
type: DOMAIN
name: tRNA-synt_1_cat_dom
description: tRNA synthetases class I, catalytic domain

phrase: RFIEEMDDDFNSANAISVLFDLAKEANIYMSEAQTSKKVLNAFLELFAEFGEVLGVS
type: DOMAIN
name: Cys-tRNA-synt_Ia_DALR
description: Cysteinyl-tRNA synthetase, class Ia, DALR