nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MIQKNWQELIKPNKVDFITHGSRAHATVVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAVQIDGVLHEFSSIPGVREDVTDIVLNIKEIAIRMEGEGPKRMVVRKEGPGVVTAGDIQTVGDVEILNPEHAICTLDEGAEICMEFTVNTGKGYVPADRNRAEDAPIGLIPVDSLYSPVRKVSYKIENTREGQVLDYDKLTLNIETNGSVTGEDAVAYAARILQDQLSIFVNFEEPQKEAPQEQVAELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLNEIKEVLASMGLHLGMEIPAWPPENIEDLAKRYEDQY

Annotated regions:
phrase: HATVVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAVQIDGVLHEFSSIPGVREDVTDIVLNIKEIAIRMEGEGPKRMVVRKEGPGVVTAGDIQTVGDVEILNPEHAICTLDEGAEICMEFTVNTGKGYVPADRNRAEDAPIGLIPVDSLYSPVRKVSYKIENTREGQVLDYDKLTLNIETNGSVTGEDAVAYAARILQDQLSIFVN
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: PALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLNEIKEVL
type: DOMAIN
name: RNAP_asu_C
description: RNA polymerase, alpha subunit, C-terminal

phrase: EPLERGFGLTLGNALRRVLLSSLRGAAVTAVQIDGVLHEFSSIPGVREDVTDIVLNIKEIAIRMEGEGPKRMVVRKEGPGVVTAGDIQTVGDVEILNPEHAICTLDEGAEICMEFTVNTGKGYVPADRNRAEDAPIGLIPVDSLYSPVRKVSYKIENTREGQVLDYDKLTLNIETNGSVTGEDAVAYAARILQDQ
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: VQIDGVLHEFSSIPGVREDVTDIVLNIKEIAIRMEGEGPKRMVVRKEGPGVVTAGDIQTVGDVEILNPEHAICTLDEGAEICMEFTVNTGKGYVPADRNRAEDAPIGLIPVDSLY
type: DOMAIN
name: DNA-dir_RNA_pol_insert
description: DNA-directed RNA polymerase, insert domain
Protein sequence:
MASPGTPGTRMTTTVSINISTPSFYNPQKKFAPVVAPKPKVNPFKTGGTSESSQPQPPGTGAQRAQIGRVGEIPVSVTAEELPLPPPPPPGEELSFSSNCAFPPPPPPFEEPFPPAPDEAFPSPPPPPPPMFDEGPALQIPPGSTGSVEKPLAPKAHVEISSAPRDPTPPFPSKFTPKPSGTLSSKPPGLDSTPAPAPWAAPQQRKEPLASVPPPPSLPSQPTAKFTPPPVASSPGSKPGATVPMAPSNSTRYPTSLQTQFTAPSPSGPLSRPQPPNFTYAQQWERPQVQEKPVPTEKSAAVKDMRRPTADPPKGNSPLTMKEVEELELLTQKLMKDMDHPPPVEAATSELCGFCRKPLSRTQPAVRALDCLFHVECFTCFKCEKQLQGQQFYNVDEKPFCEDCYAGTLEKCSVCKQTITDRMLKATGNSYHPQCFTCVMCHTPLEGASFIVDQANQPHCVDDYHRKYAPRCSVCSEPIMPEPGKDETVRVVALEKNFHMKCYKCEDCGRPLSIEADENGCFPLDGHVLCMKCHTVRAKTAC

Annotated regions:
phrase: RCSVCSEPIMPEPGKDETVRVVALEKNFHMKCYKCEDCGRPLSIEADENGCFPLDGHVLCMKCHTVRAK
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: EKCSVCKQTITDRMLKATGNSYHPQCFTCVMCHTPLEGASFIVDQANQPHCVDDYHRKYA
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: KCSVCKQTITDRMLKATGNSYHPQCFTCVMCHTPLEGASFIVDQANQPHCVD
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: LCGFCRKPLSRTQPAVRALDCLFHVECFTCFKCEKQLQGQQFYNVDEKPFCED
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: RCSVCSEPIMPEPGKDETVRVVALEKNFHMKCYKCEDCGRPLSIEADENGCFPLDGHVLCMK
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: ELCGFCRKPLSRTQPAVRALDCLFHVECFTCFKCEKQLQGQQFYNVDEKPFCEDCYAG
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: CGFCRKPLSRTQPAVRALDCLFHVECFTCFKCEKQLQGQQFYNVDEKPFCEDCY
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: CSVCSEPIMPEPGKDETVRVVALEKNFHMKCYKCEDCGRPLSIEADENGCFPLDGHVLCMKCH
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: CSVCKQTITDRMLKATGNSYHPQCFTCVMCHTPLEGASFIVDQANQPHCVDDYHR
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type
Protein sequence:
MVALSSNGYFSPDDYLELESRSDVKHEYIDGQIYAMAGTGGIHNIISGNFYMALRSRLQNSGCRVYFADLKVKLKEGRRFYYPDLLVTCDERDAPSQAFVNFPRVIIEVLSESTEGFDRGKKFQDYRTLPSLWAYILVNAQQYLVECFQRTPQDFWLLKSYEGLEAIADIEALNLAIPLAEIYATLNLPALVDEVGMETDLT

Annotated regions:
phrase: VKHEYIDGQIYAMAGTGGIHNIISGNFYMALRSRLQNSGCRVYFADLKVKLKEGRRFYYPDLLVTCDERDAPSQAFVNFPRVIIEVLSESTEGFDRGKKFQDYRTLPSLWAYILVNAQQYLVECFQRTPQDFWLLKSYEGLEAIADIEALNL
type: DOMAIN
name: Uma2
description: Putative restriction endonuclease

phrase: DDYLELESRSDVKHEYIDGQIYAMAGTGGIHNIISGNFYMALRSRLQNSGCRVYFADLKVKLKEGRRFYYPDLLVTCDERDAPSQAFVNFPRVIIEVLSESTEGFDRGKKFQDYRTLPSLWAYILVNAQQYLVECFQRTPQDFWLLKSYEGLEAIADIEA
type: DOMAIN
name: Uma2
description: Putative restriction endonuclease
Protein sequence:
MTRNDPSRTIAAPTGTTLNAKSWLTEAPLRMLMNNLHPDVAERPQELVVYGGIGRAARDWESFDAIVETLKRLDDDQTLLVQSGKPVGVFRTHADAPRVLIANSNLVPRWANWDHFNELDRKGLAMYGQMTAGSWIYIGAQGIVQGTYETFVEMGRQHFGGDLTGKWLFTGGLGGMGGAQPLAAVMAGASCLAVECRKSSIDMRLRTGYLDTWTDNLDEALRLIDESCKAGTPKSVGLLGNVADVLAELLKRGVKPDLLTDQTSAHDPVNGYLPQGWTVEQWDEKRVSAPKDVEKAARASMANHIRAMLGFHALGVPTVDYGNNLRQMALEEGVANAFDFPGFVPAYIRPLFCRGIGPFRWAALSGDPEDIAKTDAKVKELIPDNPHLHRWLDMAAEKIKFQGLPARICWVGLGDRDRLGLAFNEMVANGELKAPVVIGRDHLDSGSVASPNRETEAMADGSDAVSDWPLLNALLNTASGATWVSLHHGGGVGMGFSQHAGMVIVCDGTEAAAKRIGRVLWNDPATGVMRHADAGYDIAIDCAKEKGLDLPGILG

Annotated regions:
phrase: IAAPTGTTLNAKSWLTEAPLRMLMNNLHPDVAERPQELVVYGGIGRAARDWESFDAIVETLKRLDDDQTLLVQSGKPVGVFRTHADAPRVLIANSNLVPRWANWDHFNELDRKGLAMYGQMTAGSW
type: DOMAIN
name: Urocanase_N
description: Urocanase, N-terminal domain

phrase: PLFCRGIGPFRWAALSGDPEDIAKTDAKVKELIPDNPHLHRWLDMAAEKIKFQGLPARICWVGLGDRDRLGLAFNEMVANGELKAPVVIGRDHLDSGSVASPNRETEAMADGSDAVSDWPLLNALLNTASGATWVSLHHGGGVGMGFSQHAGMVIVCDGTEAAAKRIGRVLWNDPATGVMRHADAGYDIAIDCA
type: DOMAIN
name: Urocanase_C
description: Urocanase, C-terminal domain

phrase: GAQGIVQGTYETFVEMGRQHFGGDLTGKWLFTGGLGGMGGAQPLAAVMAGASCLAVECRKSSIDMRLRTGYLDTWTDNLDEALRLIDESCKAGTPKSVGLLGNVADVLAELLKRGVKPDLLTDQTSAHDPVNGYLPQGWTVEQWDEKRVSAPKDVEKAARASMANHIRAMLGFHALGVPTVDYGNNLRQMALEEGVANAFDFPGFVPA
type: DOMAIN
name: Urocanase_Rossmann-like
description: Urocanase, Rossmann-like domain

phrase: RDHLDSGSVASPNRE
type: CONSERVED_SITE
name: Urocanase_CS
description: Urocanase conserved site
Protein sequence:
MKRTKTSKAWMKEHVNDFFVRQAKKEGYRSRAAYKLMEIAERDHLFKPGMTVVDLGAAPGGWSQVAAEKLKGKGRAVALDILEMAPISGVTFIQGDFREASVLAELKEQLKDLPVDLVICDMSPNITGIRVIDQTRGMHLAELALEFCTEQLNSGGNFLVKVFQGSGFDEFFRAMRATFHRVVTRKPLASRGRSSEIYLLGLGKRD

Annotated regions:
phrase: YRSRAAYKLMEIAERDHLFKPGMTVVDLGAAPGGWSQVAAEKLKGKGRAVALDILEMAPISGVTFIQGDFREASVLAELKEQLKDLPVDLVICDMSPNITGIRVIDQTRGMHLAELALEFCTEQLNSGGNFLVKVFQGSGFDEFFRAMRATFHRVVTRKPLASRGRSSEIYLLGLG
type: DOMAIN
name: RNA_MeTrfase_FtsJ_dom
description: Ribosomal RNA methyltransferase, FtsJ domain
Protein sequence:
MSHNNFELSPDYKDIDKKDDLNPSIVEKGYVEGVVDDVQPERKSFITKFFDDFKPAISTDEDGSALKRSLKARHMQMIAIGGAIGSGLYVGSGSSLSDGGPASIIINYTLIGIMMFFVVYALGELSVAYPVAGGFNTIATRFIDPAWGFTISWNYFINYFITFPLELTTCAITFRFWTDINSAAWISIFLVIVIIINLFGVRAYGEVEFILSTLKVIATLGFIILAIIINCGGVPTDHRGYIGGSIIKKDPFRHGFKGFCSVFTTAAFSFSGTEFIGLAAAEVDNPQKSLPHAVKQVFWRIAVFYIVSLTLIGLLISPDDPNLMGNGSTSVSPFVLAIQEANIKGLPSVFNAVIIISVVSVTNSSTYAAARTLHGMAGLGHAPKFFKYTDRLGRPLIAMVVVLLFGFFAYINEADKNGNDVSDTVFDWLLALAGLSNFFSWGSICLSHIIFRLAYKRQGRSLRDLGFVSPMGIWGSCIGLFFNILCLMAQFYVSLFPIGGKPNANDFFQGYLAACVAIVFFVGYKIYDRSHVPSLDKLDISTGLRTYENSDEEDETSSGFKHVLKKIYGAFC

Annotated regions:
phrase: GGPASIIINYTLIGIMMFFVVYALGELSVAY
type: CONSERVED_SITE
name: Amino_acid_permease_CS
description: Amino acid permease, conserved site

phrase: HMQMIAIGGAIGSGLYVGSGSSLSDGGPASIIINYTLIGIMMFFVVYALGELSVAYPVAGGFNTIATRFIDPAWGFTISWNYFINYFITFPLELTTCAITFRFWTDINSAAWISIFLVIVIIINLFGVRAYGEVEFILSTLKVIATLGFIILAIIINCGGVPTDHRGYIGGSIIKKDPFRHGFKGFCSVFTTAAFSFSGTEFIGLAAAEVDNPQKSLPHAVKQVFWRIAVFYIVSLTLIGLLISPDDPNLMGNGSTSVSPFVLAIQEANIKGLPSVFNAVIIISVVSVTNSSTYAAARTLHGMAGLGHAPKFFKYTDRLGRPLIAMVVVLLFGFFAYINEADKNGNDVSDTVFDWLLALAGLSNFFSWGSICLSHIIFRLAYKRQGRSLRDLGFVSPMGIWGSCIGLFFNILCLMAQFYVSLFPIGGKPNANDFFQGYLAACVAIVFFVGYKIYDRSHVPS
type: DOMAIN
name: AA-permease/SLC12A_dom
description: Amino acid permease/ SLC12A domain
Protein sequence:
MASWEKEKELAHLHQPEDDPLPDLSLLLDMDQFEPTEGPDSNPGAEKIYLQLQVAPGDPSEKTYKFGYEDKEAQNPDLKMRNWVPDPEKMSKWACARLILCGLYNAKKAKELLKMDYDIHWEQSKEDSQYFEIEYHCKMCMTVIHEPMPVSYDKKTGLWIKMGPLRGDIGSVVHTCRRHYERCMSALPSSGEPLKPRVRANPVRRYREKSLIVADRPKRSRWGVAPREQPNTSSGDAMALMPGPCGPFNMDPPGCLLERVPGSEPGTSEMALAMSGGPFWEQVYRDSISGPPTGPSEN

Annotated regions:
Protein sequence:
MRKIIHIDMDCYFAAVEMRDFPEYRGKPLAVGGSSDRRGVISTCSYEARKFGVRSAMATAYAFKLCPDLILVPGRMQVYKEVSLQIREIFSRYTPLIEPLSLDEAYLDVSECQQYKGSATLIAQAIRRDILAETGLTASAGIAPVKFLAKVASDLNKPNGQYVITPETLPDFVKTLSLRKIPGVGKVTAEKLSSLGLNTCGDVQAYSKPELLARFGKFGGVLIERSQGIDERGISADRERKSVGVETTLAKDIYSLEQCQQVMPGLIQELALRLSRSAKERKIHKQVVKLKFNDFKQTTIEHRSDEVSIVMFYDLLAQAMARQEGRGIRLLGISVGLADSILAVPEIPNAQTQLDLAL

Annotated regions:
phrase: KIPGVGKVTAEKLSSLGLNTCGDVQAYSKPELLARFGKFGGVLIERSQGI
type: DOMAIN
name: IMS_HHH_1
description: DNA polymerase IV/DNA polymerase iota-like, thumb domain

phrase: RKSVGVETTLAKDIYSLEQCQQVMPGLIQELALRLSRSAKERKIHKQVVKLKFNDFKQTTIEHRSDEVSIVMFYDLLAQAMARQEGRGIRLLGISVGLADSILAVPEIPNAQTQLD
type: DOMAIN
name: DNA_pol_Y-fam_little_finger
description: DNA polymerase, Y-family, little finger domain

phrase: IIHIDMDCYFAAVEMRDFPEYRGKPLAVGGSSDRRGVISTCSYEARKFGVRSAMATAYAFKLCPDLILVPGRMQVYKEVSLQIREIFSRYTPLIEPLSLDEAYLDVSECQQYKGSATLIAQAIRRDILAETGLTASAGIAPVKFLAKVASDLNKPNGQYVITPETLPDFVKTLSLRKIPGV
type: DOMAIN
name: UmuC
description: UmuC domain

phrase: IDMDCYFAAVEMRDFPEYRGKPLAVGGSSDRRGVISTCSYEARKFGVRSAMATAYAFKLCPDLILVPGRMQVYKEVSLQIREIFSRYTPLIEPLSLDEAYLDVSECQQYKGSATLIAQAIRRDILAETGLTASAGIAPVKFLAKVAS
type: DOMAIN
name: UmuC
description: UmuC domain
Protein sequence:
MSTPIQILNNAAEAVAWLRSRVQGDLQTDSRKVKAGDAFVAWPGAATDGRAYVGKALEQGAAAVLVEAEGLQAFDLSGDRIAALKDLKAATGLIADQWFAHPSGELDVLAVTGTNGKTTTAWWLAHALSKVTLNTRTGCALVGTLGVGVPPALESTGMTTPDPVLLQRAFRSYADQGLAACAIEASSIGIVEHRLDGSKIRVALFTNFTQDHLDYHGSMDAYWQAKAQLFDWPGLPAAVVNIDDAHGARLWARLQGRAMDVWSVSIQGPARLQAKDIGLGDEGLSFTVLEAGHSLRMNTRLVGQYNVSNLLGVLAALRCLGLTLEEAVAACAHLEPVPGRMQQIVKPGLPLVAVDYAHTPDALEKALRALQPAVRQRQGKLWCVFGCGGDRDNSKRPLMGQAAQANADGVFVTSDNPRSEVPESIIDQILAGMQAGETLHVQADRAAAIAQAIARADARDVVLIAGKGHEDYQETKGVRHPFSDMAEAQKALAAREGKIRS

Annotated regions:
phrase: QTDSRKVKAGDAFVAWPGAATDGRAYVGKALEQGAAAVLVEAE
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: VTGTNGKTTTAWWLAHALSKVTLNTRTGCALVGTLGVGVPPALESTGMTTPDPVLLQRAFRSYADQGLAACAIEASSIGIVEHRLDGSKIRVALFTNFTQDHLDYHGSMDAYWQAKAQLFDWPGLPAAVVNIDDAHGARLWARLQGRAMDVWSVSIQGPARLQAKDIGLGDEGLSFTVLEAGHSLRMNTRLVGQYNVSNLLGVLA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRMQQIVKPGLPLVAVDYAHTPDALEKALRALQPAVRQRQGKLWCVFGCGGDRDNSKRPLMGQAAQANADGVFVTSDNPRSEVPESIIDQILAGMQAGETLHVQADRAAAIAQAIARADARDVVLIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MTGTSNIPTHGKEHKDAPALLPLPAPNPHHTHAAHPGNPSHDRPPSRGKLFIKTHGCQMNEYDSAKMADVLTTTEALELTDNPEEADIILINTCSIREKAQEKVFSQLGRWRALKTSGRDVIIGVGGCVASQEGEAIVKRAPYVDLVFGPQTLHRLPDMIRARREQNRPQVDIRFPEIEKFDHLPTPRAEGPSAFVSIMEGCSKYCSFCVVPYTRGEEVSRPFEDVLTEIAHLATQGVREINLLGQNVNAYRGAMDPGPSNNTNPAPPPYADLGLLIRAIAQFESIGRIRFTTSHPLEFSDSLVEAYRDVPQLANHLHLPVQSGSDRILSAMKRGYTALEFKSKIRKLRAVRPDISISSDFIIGFPGESDTDFQKTMQLIEDIGFDQSFSFIYSRRPGTPASNLEDHTPDEIKRTRLEHLQKHINTYAADISKRMIGTVQTVLVEGPSKKNPNELTGKTENMRPVNFPGHPRLIGQFIDVHITEALSNSLRGRVHTN

Annotated regions:
phrase: VSIMEGCSKYCSFCVVPYTRGEEVSRPFEDVLTEIAHLATQGVREINLLGQNVNAYRGAMDPGPSNNTNPAPPPYADLGLLIRAIAQFESIGRIRFTTSHPLEFSDSLVEAYRDVPQLANHLHLPVQSGSDRILSAMKRGYTALEFKSKIRKLRAVRPDISISSDFIIGFPGESDTDFQKTMQL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: KLFIKTHGCQMNEYDSAKMADVLTTTEALELTDNPEEADIILINTCSIREKAQEKVFSQLGRWRALKTSGRDVIIGVGGCVASQEGEAIVKRAPYVDLVF
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: GKLFIKTHGCQMNEYDSAKMADVLTTTEALELTDNPEEADIILINTCSIREKAQEKVFSQLGRWRALKTSGRDVIIGVGGCVASQEGEAIVKRAPYVDLVFGPQTLHRLPDMIRARR
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: RAEGPSAFVSIMEGCSKYCSFCVVPYTRGEEVSRPFEDVLTEIAHLATQGVREINLLGQNVNAYRGAMDPGPSNNTNPAPPPYADLGLLIRAIAQFESIGRIRFTTSHPLEFSDSLVEAYRDVPQLANHLHLPVQSGSDRILSAMKRGYTALEFKSKIRKLRAVRPDISISSDFIIGFPGESDTDFQKTMQLIEDIGFDQSFSFIYSRRPGTPASNLEDHTPDEIKRTRLEHLQKHINTYAA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: KRMIGTVQTVLVEGPSKKNPNELTGKTENMRPVNFPGHPRLIGQFIDVHITEALSNSLRGR
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: RGKLFIKTHGCQMNEYDSAKMADVLTTTEALELTDNPEEADIILINTCSIREKAQEKVFSQLGRWRALKTSGRDVIIGVGGCVASQEGEAIVKRAPYVDLVFGPQTLHRLPDMIRARREQNRPQVDIRFPEIEKFDHLPTPRAEGPSAFVSIMEGCSKYCSFCVVPYTRGEEVSRPFEDVLTEIAHLATQGVREINLLGQNVNAYRGAMDPGPSNNTNPAPPPYADLGLLIRAIAQFESIGRIRFTTSHPLEFSDSLVEAYRDVPQLANHLHLPVQSGSDRILSAMKRGYTALEFKSKIRKLRAVRPDISISSDFIIGFPGESDTDFQKTMQLIEDIGFDQSFSFIYSRRPGTPASNLEDHTPDEIKRTRLEHLQKHINTYAADISKRMIGTVQTVLVEGPSKKNPNELTGKTENMRPVNFPGHPRLIGQFIDVHITEALSNSLRGRV
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: KRMIGTVQTVLVEGPSKKNPNELTGKTENMRPVNFPGHPRLIGQFIDVHITEALSNSLRGRVH
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: PSAFVSIMEGCSKYCSFCVVPYTRGEEVSRPFEDVLTEIAHLATQGVREINLLGQNVNAYRGAMDPGPSNNTNPAPPPYADLGLLIRAIAQFESIGRIRFTTSHPLEFSDSLVEAYRDVPQLANHLHLPVQSGSDRILSAMKRGYTALEFKSKIRKLRAVRPDISISSDFIIGFPGESDTDFQKTMQLIEDIGFDQSFSFIYSRRPGTPASNLEDHTPDEIKRTRL
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: VSIMEGCSKYCSFCVVPYTR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site
Protein sequence:
MKRCRSDELQQQQGEEDGAGLEDAASHLPGADLRPGETTGANSAGGPTSDAGAAAAPNPGPRSKPPDLKKIQQLSEGSMFGHGLKHLFHSRRRSREREHQTSQDSQQHQQQQGMSDHDSPDEKERSPEMHRVSYAMSLHDLPARPTAFNRVLQQIRSRPSIKRGASLHSSSGGGSSGSSSRRTKSSSLEPQRGSPHLLRKAPQDSSLAAILHQHQCRPRSSSTTDTALLLADGSNVYLLAEEAEGIGDKVDKGDLVALSLPAGHGDTDGPISLDVPDGAPDPQRTKAAIDHLHQKILKITEQIKIEQEARDDNVAEYLKLANNADKQQVSRIKQVFEKKNQKSAQTIAQLHKKLEHYRRRLKEIEQNGPSRQPKDVLRDMQQGLKDVGANVRAGISGFGGGVVEGVKGSLSGLSQATHTAVVSKPREFASLIRNKFGSADNIAHLKDPLEDGPPEEAARALSGSATLVSSPKYGSDDECSSASASSAGAGSNSGAGPGGALGSPKSNALYGAPGNLDALLEELREIKEGQSHLEDSMEDLKTQLQRDYTYMTQCLQEERYRYERLEEQLNDLTELHQNEMTNLKQELASMEEKVAYQSYERARDIQEAVESCLTRVTKLELQQQQQQVVQLEGVENANARALLGKFINVILALMAVLLVFVSTIANFITPLMKTRLRITSTTLLVLVLFLLWKHWDSLTYLLEHVLLPS

Annotated regions:
Protein sequence:
MTTQIFQLPLKYCASSFSSTGQRNYGASSSPSPIVICKSNGISDGLWVKRRKNNRRFGSLIVKQEKGDVTEIRVPVPLTLEQQEKEKQNRDDEEDEIDEGDVDPEDLKYVNEIKRVIELLRRNRDMIFSEVKLTIMIEDPRELERRRLLGIEDADTPSRDDLAEALEQVNDGKIPKDRATLRMLHEEMIRWPNLEVEVSKKQRGKSMYAKSTDTGIDPKEAAKRLNVEWDSAAAIEEVDVDDEQGVVTKVAGYGALYFVSALPVIIGISVVLILFYNSLQ

Annotated regions:
Protein sequence:
MAKLTKRQKAIAEKIEAGKAYNFEEAATLLASLPAAKFVESYDIAVNLGVDPRKSDQVVRSATVLPHGTGKTVRVAVFTQGPAAEAALAAGADRVGMDDLAAEMKGGDLNYDVVIASPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPDVATAVKNAKAGQVRYRTDKNGIIHTSVGKIGFEADKLKENVEALIADLKRIKPASSKGIYVKRVTLSTTMGPGLVIDQSSLNV

Annotated regions:
phrase: MRVVGQLGQVLGPRGLMP
type: CONSERVED_SITE
name: Ribosomal_uL1_CS
description: Large ribosomal subunit protein uL1, conserved site
Protein sequence:
MADRQSLEEALRRIWGYDHFRYPQGEVIDCLLARRDCLVVLPTGGGKSICFQLPALLGEGLTLVVSPLVALMEDQVQSLRRQNLPAACLHSQLSRPERKQVLYQLGQQQLKLLYLSPETLLSEPVWNLLRQPQVKLQGIMLDEAHCLVQWGDSFRPAYRRLGALRRGLGRDKGQIPLAAFTATADRQQQNLIVEGLNLRSPECFQVSPHRPQLHLKVKMVLSEYCRRQQLRRFLLKHLQESGLIYVRTRTMAINLAQWLQERGFDSEAYHGGLGPHQRRQLEQKWLTGQISSVVCTNAFGLGIDKPDTRWVLHYQAPLMLMDYLQEVGRAGRDLQPAECLTLVSEPTGWLDSGDRQLRQYFLSQASKYLQRAEVLSQQIPSQGNLGQLKAHFPDLEMALAWLHRRGNLEWLDPFNYRINPGHYQANPLEELKSQYRLMTQYLTTSRCRWQTILVAFGDNSPAARRPCGTCDNCLVGRC

Annotated regions:
phrase: QQLRRFLLKHLQESGLIYVRTRTMAINLAQWLQERGFDSEAYHGGLGPHQRRQLEQKWLTGQISSVVCTNAFGLGIDKPDTRWVLHYQAPLMLMDYLQEVGRAG
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: QLRRFLLKHLQESGLIYVRTRTMAINLAQWLQERGFDSEAYHGGLGPHQRRQLEQKWLTGQISSVVCTNAFGLGIDKPDTRWVLHYQAPLMLMDYLQEVGRAGRDLQPAECLTLVSEPTGWLDSGDRQLRQYFLSQASKYLQRAEVLSQQI
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: SQYRLMTQYLTTSRCRWQTILVAFGDNSPAARRPCGTCDNC
type: DOMAIN
name: RecQ_Zn-bd
description: ATP-dependent DNA helicase RecQ, zinc-binding domain

phrase: QGEVIDCLLARRDCLVVLPTGGGKSICFQLPALLGEGLTLVVSPLVALMEDQVQSLRRQNLPAACLHSQLSRPERKQVLYQLGQQQLKLLYLSPETLLSEPVWNLLRQPQVKLQGIMLDEAHCLVQWGDSFRPAYRRLGALRRGLGRDKGQIPLAAFTATADRQQQ
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: IDCLLARRDCLVVLPTGGGKSICFQLPALLGEGLTLVVSPLVALMEDQVQSLRRQNLPAACLHSQLSRPERKQVLYQLGQQQLKLLYLSPETLLSEPVWNLLRQPQVKLQGIMLDEAHCLVQWGDSFRPAYRRLGALRRGLGRDKGQIPLAAFTATADRQQQNLIVEGLNLRSP
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: GYDHFRYPQGEVIDCLLARRDCLVVLPTGGGKSICFQLPALLGEGLTLVVSPLVALMEDQVQSLRRQNLPAACLHSQLSRPERKQVLYQLGQQQLKLLYLSPETLLSEPVWNLLRQPQVKLQGIMLDEAHCLVQWGDSFRPAYRRLGALRRGLGRDKGQIPLAAFTATADRQQQNLIVEGLNLRSPECFQVSPHRPQLHLKV
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: INLAQWLQERGFDSEAYHGGLGPHQRRQLEQKWLTGQISSVVCTNAFGLGIDKPDTRWVLHYQAPLMLMDYLQEVGRAGRD
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like
Protein sequence:
MSSSVSSKTRYWVLALAAIVLDQWSKWAVLSSFQYRERVNVIPSFFDLTLVYNPGAAFSFLADQGGWQKYFFLVLAVAVSAYLVRAILRDEFATLGKTGAAMIIGGALGNVIDRLIHGHVVDFLLFYWQNWFYPAFNIADSFICVGAVLAVLDNIVHRKTQEEKY

Annotated regions:
Protein sequence:
MNIIDRFEQENISKRTANKKIPDFEAGDTVKVTVKIVDRSIEKDGKEKLTERFQAYEGVVIAKRNRGITSSFLVRKISHGEGVERRFMTYSPIVHSIDVVKYGVVRRAKLYYLRNRSGKSARIKERHIPIAKTKAAKA

Annotated regions:
phrase: VVKYGVVRRAKLYYL
type: CONSERVED_SITE
name: Ribosomal_bL19_CS
description: Large ribosomal subunit protein bL19, conserved site
Protein sequence:
MSLMTKLGFRALVASCLIAAGGAAHAQVNVLITGVGSTQFPIATANFVNEASLPQQVTSVVRGDLARSGKFSNVDAGSTPVPETASVDFGAWKAKGANAFVAGSVNREPNGQYKVNFILYDTVKQQSLGGLSLTTSNDNEGMRKTGHKIADYIYQKLLGVRGVFNTRLSYVQRTGNVYKLLISDSDGQNAIPALTSKEPIISPAWSPSGTKVAYVSFELRKPVVYIHDLPTGRRYVISNQKGNNSAPAWSPDGQTLAVALSLTGNTQIYSVSSTGTGLRRLTRSSSIDTEPFYSPDGKWIYFTSDRGGAPQIYRMPAEGESAGAAQRVTFTGSYNTSPRVSPDGKLLAYISRTGGGFKLYVQDLQSGAANAVTNTTRDESPSFAANGQYILYARQSGGRSVLAAVPSDGSAPPQILSVQGGAIREPSWGPFMQ

Annotated regions:
phrase: QRVTFTGSYNTSPRVSPDGKLLAYISRTGGGFKLY
type: REPEAT
name: PD40
description: WD40-like beta propeller

phrase: ISNQKGNNSAPAWSPDGQTLAVALSLTGNTQI
type: REPEAT
name: PD40
description: WD40-like beta propeller

phrase: LRRLTRSSSIDTEPFYSPDGKWIYFTSDRGGAPQIY
type: REPEAT
name: PD40
description: WD40-like beta propeller

phrase: VTNTTRDESPSFAANGQYILYARQSGG
type: REPEAT
name: PD40
description: WD40-like beta propeller

phrase: LTSKEPIISPAWSPSGTKVAYVSFELRKPVV
type: REPEAT
name: PD40
description: WD40-like beta propeller

phrase: NVLITGVGSTQFPIATANFVNEASLPQQVTSVVRGDLARSGKFSNVDAGSTPVPETASVDFGAWKAKGANAFVAGSVNREPNGQYKVNFILYDTVKQQS
type: DOMAIN
name: TolB_N
description: TolB, N-terminal
Protein sequence:
MTLPKIKHVRAWFIGGATAEKGAGGGDYHDQGGNHWIDDHIATPMSKYRDYEQSRQSFGINVLGTLIVEVEAENGQTGFAVSTAGEMGCFIVEKHLNRFIEGKCVSDIKLIHDQMLGATMYYSGSGGLVMNTISCVDLALWDLFGKVVGLPVYKLLGGAVRDEIQFYATGARPDLAKEMGFIGGKMPTHWGPHDGDAGIRKDAAMVADMREKCGPDFWLMLDCWMSQDVNYATKLAHACAPFNLKWIEECLPPQQYEGYRELKRNAPAGMMVTSGEHHGTLQSFRTLAETGIDIMQPDVGWCGGLTTLVEIAALAKSRGQLVVPHGSSVYSHHAVITFTNTPFSEFLMTSPDCSTLRPQFDPILLDEPVPVNGRIHKSVLDKPGFGVELNRDCHLKRPYSH

Annotated regions:
phrase: TISCVDLALWDLFGKVVGLPVYKLL
type: CONSERVED_SITE
name: Mandel_Rmase/mucon_lact_enz_CS
description: Mandelate racemase/muconate lactonizing enzyme, conserved site

phrase: EIQFYATGARPDLAKEMGFIGGKMPTHWGPHDGDAGIRKDAAMVADMREKCGPDFWLMLDCWMSQDVNYATKLAHACAPFNLKWIEECLPPQQYEGYRELKRNAPA
type: DOMAIN
name: Mandelate_racemase_C
description: Mandelate racemase/muconate lactonizing enzyme, C-terminal

phrase: LIVEVEAENGQTGFAVSTAGEMGCFIVEKHLNRFIEGKCVSDIKLIHDQMLGATMYYSGSGGLVMNTISCVDLALWDLFGKVVGLPVYKLL
type: DOMAIN
name: Mandelate_racemase_N_dom
description: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain

phrase: EMGFIGGKMPTHWGPHDGDAGIRKDAAMVADMREKCGPDFWLMLDCWMSQDVNYATKLAHACAPFNLKWIEECLPPQQYEGYRELKRNAPAGMMVTSGEHHGTLQSFRTLAETGIDIMQPDVGWCGGLTTLVEIAALAKSRGQLVVPHGSSVYSHHAVITFTNTPFSEFLMTSPDCSTLRPQFDPILLDEPVPVNGRIHKSVLDKPGFGVELNR
type: DOMAIN
name: Enolase_C-like
description: Enolase C-terminal domain-like
Protein sequence:
MGNRGSSTSSRPPLSSEANIYAKLQDHIQRQTRPFSGGGYFNGGGDKNPVQHIKDYHIDSVSSKAKLRIIEGIIKAISKIGFKIDTKQPIEDILKDIKKQLPDPRAGSTFVKNAEKQETVCKMIADAINQEFIDLGQDKLIDTTEGAASICRQIVLYINSLTHGLRAEYLDVHGSIENTLENIKLLNDAIKQLHERMVTEVTKAAPNEEVINAVTMIEAVYRRLLNEQNLQISILTNFIDNILTPTQKELDKLQTDEVDIIKLLNDTNSVLGTKNFGKVLSYTLCNLGIAASVANKINKALQRVGLKVEQYLQSKNWAEFDKELDLKRFSGLVSAENIAEFEKAVNLLRQTFNERHKILENNCAKKGGDEVKTPLDKRIEAQRLDRKHILMEFLNKSTQAYNDFLENVKKIGIKLVKEIALTPNITRLRDALSRINDMGTIALDLSLIGFYTNAAAREERETFLTQLTLVKNVLEEISKTDPNFKNLYDSCFRLLQIIDFYTDIVQKKYGGGEDCECTRVGGAALTVEELGLSKAARSQVDLNQAINTFMYYYYVAQIYSNLTHNKQEFQSYEENYATILGDAIAGRLMQLDTEKNARINSPAVDLARGHVGPNPGGAQEVDWKAAVSAIELEYDVKRRFYRALEGLDLYLKNITKTFVNNIDSIQTVQQMLDGVRIIGRWFTEATGDTLAQVFESFPTSAGNDSNVFTDNAPAGHYYEKVAAEIQQGRSVGTLRPVRASQAKNIRDLIGRSLSNFQALKNIINAFARIGDMLGGEELRQMVPMSPLQIYKTLLEYLQHSALSVGLKNLNQSEIGGQRMALAQTAEEAAQRVYLSTVRVNDALSSRWETEDMFFTFMLKSMAAKIFIVLGIYDMFERPEPVYKLIPTRMILGGADELEPEVIPEAAELYFRLPRLAEFYQKLFSFRDGNVQISMLPELEGIFSGLIRIIFMRPIELINIGDYSETEIRQLIKEINVIYQHFNLEYGEQEATKKALIHFVNEINRRFGVITRTEWEKFQRIVQEARTMNDFGMMNQTNYSILPDEDGYTQSSQLLPSDRFIGPSSQPTPKWRPALYNIDSVDVQTGMLQPNSQWDLVQKFRKQLSEMFEDPSLQQELGKISYQELIRQAINELKKEHTDKIQIVSKLIQGSESLADTDVNKIFLFHETVITGLNLLSAIYVLLNNFRNNIKGLDLDTIQKSIIEWLRETQPPDVNHANLLDWLGRKHGAISEIRNPGLVVKANNARLSEVYPDPTTDANTPQDRNLTTETLFAWIVQYVGIPAGGGVRPEQELAARYLVDNQRIMQLLLTNIFEITSSFNKMIQVRFPETSTAHVHLDFTGLISLIDSLMADTKYFLDLLRPHIDKNIIQYYENRSNPGSFYWLEEHLIDKLIKPPTDARGRPLPGGELGLEGVNQIINKTYTLLTKPYNVLQLRGGAQRRDAANIQINNNPQSSERFEQYGRVFSKLVFYDALENNSGLRVEQVALGDFRLSNLIRTNNAQEENTLSYWDNIALRTYANVNDAANNLRRYRLYGSDYGIQNNRSMMMVFNQLIASYITRFYDAPSGKIYLNLINAFANGNFSQAVMEMGYAHPDLARNNNAFGHRGDPTEQSVLLLSLGLILQRLIKDTNRQGLSQHLISTLTEIPIYLKENYRANLPLFNKMFNILISQGELLKQFIQYTNVQLARPNLTALLRANNDSVIYYNNNNVPMTGLSIGQAAMRGIGGVFRPNVTLMPLGDAQNNTSDIVRKRLVAVIDGIIRGSHTLADSAMEVLHELTDHPIYLETEEHFIQNYMSRYNKEPLMPFSLSLYYLRDLRIENNEVYDPLLYPNLESGSPEFKLLYGTRKLLGNDPVQLSDMPGVQLIMKNYNETVVAREQITPTRFEHFYTHAIQALRFIVNIRSFKTVMTYNENTFGGVNLISEDRNDKPIITAGIGMNAVYSLRKTLQDVISFVESSYQEEQINNIHKIVSPKGQTRTLGSNRERERIFNLFDMNIIPINVNALMRSIPLANIYNYDYSFEEIACLMYGISAEKVRSLNTAAPQPDVAEVLNIPNRPPINTREFMLKLLINPYVSVSITQYGNELLSKGNAGYMSRIFRGDNALNMGRPKFLSDQIFNKVLFGSLYPTQFDYDEAGPSLAAGIQRGRERWGHPMSIYINQALHEIVRTIRLAETVRGLRNVIDRNQIIGELNAFRTQLEDTLREVNNLVQTPEIQNNPTPEIIAAVQNWGQQYRAQITDLIDLIGNAGQANSMISLIQNINVQTAGAQLTALFNRRGLPAPPPRQVLQNDIEAIQWFMTIVINHPPILIAPFMLLVNNLKEFLNTLERYVYKTPRWLGPGTARIAQPPVGMAPGINMRHHTSYTENSVLTYITEQNREEGPWSIVKQVGVGIQKPTLVQIGKDRFDTRLIRNLIFITNVQRLLRLRLNLELSQFRNVLVSPDHIINPSITEYGFSITGPSETFSDKQYDSDIRIL

Annotated regions:
Protein sequence:
MEELSGPSSDTLATVESSSNEPDKEVASPDVAATATLSSVEEPGPNPTATPPVWDRGGPLQQVACPVPDSCQTSSTTRGVGTNEDLRLPRRRPPPGKQIPCSSPGCSLSFPSVRDLAQHLRTHCPPTQSLEGKLFRCSALSCTESFPSMQELVAHGKLHYKPNRYFKCENCLLRFRTHRSLFKHLHVCIDHGQNPAPPPPPALDKEPPVPERPPESDPSSSLGLPFPLLEPFTSAPTGPFLPYLNPAPFGLSPPRLRPFLAATPGPPTSSTAIWKKSQGATSSPRRPQGGSDAPSGACR

Annotated regions:
phrase: IPCSSPGCSLSFPSVRDLAQHLRTHCPPT
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: FRCSALSCTESFPSMQELVAHGKLHYKPN
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: PCSSPGCSLSFPSVRDLAQHLRTHCPPTQSLEGKLFRCSALSCTESFPSMQELVAHGKLHYKPNRYFKCENCLLRFRTHRSLFKHLHVCIDHGQNPA
type: DOMAIN
name: Znf-C2H2_ribbon
description: C2H2-type zinc ribbon

phrase: CSALSCTESFPSMQELVAHGKL
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: FKCENCLLRFRTHRSLFKHLHVCIDHGQN
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: FKCENCLLRFRTHRSLFKHLHVCID
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: FRCSALSCTESFPSMQELVAHGKL
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: IPCSSPGCSLSFPSVRDLAQHLRT
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: CSSPGCSLSFPSVRDLAQHLRT
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type
Protein sequence:
MSPQTETRTGTGFKAGVKDYRLTYYTPDYVTKETDILAAFRMTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVAGEDNQYIAYVAYPLDLFEEGSVTNLFTSIVGNVFGFKALRALRLEDLRIPPAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKAQAETGEIKGHYLNATAGTCEEMLKRAEYAKELGVPIVMHDYLTGGFTANTSLSHYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHIHSGTVVGKLEGEREVTLGFVDLLRDDYIEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNNIIREAAKFSPELAAACEVWKEIKFEFETIDTL

Annotated regions:
phrase: YYTPDYVTKETDILAAFRMTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYDIEPVAGEDNQYIAYVAYPLDLFEEGSVTNLFTSIVGNVFGFKALRALRLEDLRIPPA
type: DOMAIN
name: RuBisCO_lsu_fd_N
description: Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal

phrase: GIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKAQAETGEIKGHYLNATAGTCEEMLKRAEYAKELGVPIVMHDYLTGGFTANTSLSHYCRDNGLLLHIHRAMHAVIDRQRNHGIHFRVLAKALRMSGGDHIHSGTVVGKLEGEREVTLGFVDLLRDDYIEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNNIIREAAKFSPELAAACEV
type: DOMAIN
name: RuBisCO_lsu_C
description: Ribulose bisphosphate carboxylase, large subunit, C-terminal

phrase: GLDFTKDD
type: ACTIVE_SITE
name: RuBisCo_large_chain_AS
description: Ribulose bisphosphate carboxylase, large chain, active site