nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MGPVMLDVEGFELDAEEREILAHPLVGGLILFTRNYHDPEQLRELVRQIRSSARNHLVIAVDQEGGRVQRFREGFTRLPAAQSFAALLGMDAGGKLAEEAGWLMACEMIAMDIDISFAPVLDVGHLSAAIGERSFHEEPENVLAMAKRFITGMQSAGMKATGKHFPGHGAVSADSHKETPRDPRPAAEIRRHDMLPFRELISYNMLDAVMPAHVVYSDVDPLPASGSPYWLKQVLRKELGFDGVIFSDDLSMEGAAILGSYAERGQAALDAGCDMILVCNNRKGAVSVLDNLSPIKAERVTRLYHKGVITRQELMASARWKQVSGELTALHERWQTHKAGQ

Annotated regions:
phrase: FELDAEEREILAHPLVGGLILFTRNYHDPEQLRELVRQIRSSARNHLVIAVDQEGGRVQRFREGFTRLPAAQSFAALLGMDAGGKLAEEAGWLMACEMIAMDIDISFAPVLDVGHLSAAIGERSFHEEPENVLAMAKRFITGMQSAGMKATGKHFPGHGAVSADSHKETPRDPRPAAEIRRHDMLPFRELISYNMLDAVMPAHVVYSDVDPLPASGSPYWLKQVLRKELGFDGVIFSDDLSMEGAAILGSYAERGQAALDAGCDMILVCNNRKGAVSVLDNLSPIKAER
type: DOMAIN
name: Glyco_hydro_3_N
description: Glycoside hydrolase, family 3, N-terminal

phrase: VLRKELGFDGVIFSDDL
type: ACTIVE_SITE
name: Glyco_hydro_3_AS
description: Glycoside hydrolase, family 3, active site
Protein sequence:
MEVEAVCGGAGEVEAQDSDPAPAFSKAPGSAGHYELPWVEKYRPVKLNEIVGNEDTVSRLEVFAREGNVPNIIIAGPPGTGKTTSILCLARALLGPALKDAMLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILTRLMNVIEKERVPYTDDGLEAIIFTAQGDMRQALNNLQSTFSGFGFINSENVFKVCDEPHPLLVKEMIQHCVNANIDEAYKILAHLWHLGYSPEDIIGNIFRVCKTFQMAEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTMAPVAS

Annotated regions:
phrase: NVPNIIIAGPPGTGKTTSILCLARALLGPALKDAMLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKL
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LTDAQILTRLMNVIEKERVPYTDDGLEAIIFTAQGDMRQALNNLQSTFSGFGFINSENVFKV
type: DOMAIN
name: RFC_lid
description: Replication factor C, lid domain

phrase: IIIAGPPGTGKTTSILCLARALLGPALKDAMLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVL
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: PHPLLVKEMIQHCVNANIDEAYKILAHLWHLGYSPEDIIGNIFRVCKTFQMAEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLA
type: DOMAIN
name: Rep_factorC_C
description: Replication factor C, C-terminal
Protein sequence:
MTVHATPEPAAHQGVALGSSFYAAMRILPRPQREAMFQVYSFCRFVDDIADSDRPREQRVAELQQWRDDIAALYRGAPPPRLADYQESLRTFGLKREDFEAIIDGMEMDVDADIRAPDEATLDLYCDRVASAVGRLSVRIFGLPEADGIELSHHLGRALQLTNILRDIDEDAGIGRLYLPSELLHKVGITATDPRVVAADSALPSVCAPLVERALAHFAAADKVMNRNPRRVVKAPRIMGKYYYSILQLLIARGFAAPRAPVKLGKASKIAILLQYAIV

Annotated regions:
phrase: GSSFYAAMRILPRPQREAMFQVYSFCRFVDDIADSDRPREQRVAELQQWRDDIAALYRGAPPPRLADYQESLRTFGLKREDFEAIIDGMEMDVDADIRAPDEATLDLYCDRVASAVGRLSVRIFGLPEADGIELSHHLGRALQLTNILRDIDEDAGIGRLYLPSELLHKVGITATDPRVVAADSALPSVCAPLVERALAHFAAADKVMNRNPRRVVKAPRIMGKYYYSILQLLIARGFAAPRAPVKLGKAS
type: DOMAIN
name: Trans_IPPS_HH
description: Trans-isoprenyl diphosphate synthases, head-to-head

phrase: LGRALQLTNILRDIDEDAGIGRLYL
type: CONSERVED_SITE
name: Squalene/phytoene_synthase_CS
description: Squalene/phytoene synthase, conserved site

phrase: YCDRVASAVGRLSVR
type: CONSERVED_SITE
name: Squalene/phytoene_synthase_CS
description: Squalene/phytoene synthase, conserved site
Protein sequence:
MKEKYILSIDEGTTSTRAIIFDHNGNEIVSAQKEITQYFPEPGWVEHDANEIWMAVQTTIANAFIQSGIWPGQIAAIGITNQRETAVVWDKDTGKPIYHAIVWQSRQTTDLAEKLKKDGYSNLIREKTGLIVDPYFSATKIRWILDHVPGAQEKAEQGKLLFGTIDSWLVWKLTDGQKHVTDYTNASRTMLFNIHTLKWDKEILNLLNIPEKMLPEVRSNSEVYGTTASYMFFGGEVSIAGMAGDQQAALFGQLALKPGMVKNTYGTGAFIVMNTGDKPTTSNNNLLTTIGYGINGKITYALEGSIFVAGSAIQWLRDSMKLIKNAPDSEKAAYESTSENEVYVVPAFTGLGAPYWDAEARGAIFGVTRGTTDKDMIKATLQSLAYQTRDVVDTMQKDSGIDIPALRVDGGASNNNYLMQFQADILGKKIERTKVLETTSMGAAFLAGLAVGYWKNIDELKHVFTIGQAFEPKMGDLERKKLYDGWQRAIKATRVFAHGE

Annotated regions:
phrase: YILSIDEGTTSTRAIIFDHNGNEIVSAQKEITQYFPEPGWVEHDANEIWMAVQTTIANAFIQSGIWPGQIAAIGITNQRETAVVWDKDTGKPIYHAIVWQSRQTTDLAEKLKKDGYSNLIREKTGLIVDPYFSATKIRWILDHVPGAQEKAEQGKLLFGTIDSWLVWKLTDGQKHVTDYTNASRTMLFNIHTLKWDKEILNLLNIPEKMLPEVRSNSEVYGTTASYMFFGGEVSIAGMAGDQQAALF
type: DOMAIN
name: FGGY_N
description: Carbohydrate kinase FGGY, N-terminal

phrase: YFSATKIRWILD
type: CONSERVED_SITE
name: Carb_kinase_FGGY_CS
description: Carbohydrate kinase, FGGY, conserved site

phrase: GAIFGVTRGTTDKDMIKATL
type: CONSERVED_SITE
name: Carb_kinase_FGGY_CS
description: Carbohydrate kinase, FGGY, conserved site

phrase: KNTYGTGAFIVMNTGDKPTTSNNNLLTTIGYGINGKITYALEGSIFVAGSAIQWLRDSMKLIKNAPDSEKAAYESTSENEVYVVPAFTGLGAPYWDAEARGAIFGVTRGTTDKDMIKATLQSLAYQTRDVVDTMQKDSGIDIPALRVDGGASNNNYLMQFQADILGKKIERTKVLETTSMGAAFLAGL
type: DOMAIN
name: FGGY_C
description: Carbohydrate kinase FGGY, C-terminal
Protein sequence:
MSVRVSGKHMEIGDSFRVRIGEQIEQAVTKYFDGGYSSQVTVEKSGSRFSADCKLHLDTGVVLQANGQANEPQSAFDAASERIEKRLRRYKRKLKDHHNGNGQNSTEVAYRVMDSVPFEDEEVPDDYAPTIVAETTKQLRTMSVANAVMALDMTDEPVLMFRSPGKDDLNIVYRRNDGNIGWIDAANIKA

Annotated regions:
phrase: APTIVAETTKQLRTMSVANAVMALDMTDEPVLMFRSPGKDDLNIVYRRNDGNI
type: DOMAIN
name: Ribosom_S30AE_C
description: Sigma 54 modulation/S30EA ribosomal protein, C-terminal
Protein sequence:
MKAKGTRKNYQHLWRWGIMLLGMLIICSATEQLWVTVYYGVPVWKEATTTLFCASDAKAYDTEKHNVWATHACVPTDPNPQEVLMENVTEDFNIWENNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTDAKTNHTNGSNSTGTNGSDNSLKGEMKNCSFNITTTIRDKVQKEFALFYKLDLVPIDDSNKTNTSYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFALLKCNNKTFSGKGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSQNFTDNAKTIIVQLNESVEINCTRPNNNTRKSIHIGPGQAFYTTGEIIGDIRQAHCNISKTAWNNTLRQVAKKLKEKFNTTIIFNQSSGGDLEIVMHSFTCGGEFFYCNTRQLFNSTWDNSTWNDSTRNSIHDENITLPCRIKQIINMWQTVGKAMYAPPIKGQIRCSSNITGLLLERDGGNNTDTETFRPGGGNMKDNWRSELYKYKVVKIEPVGIAPTRAKRRVVQRERRAVGIGAVFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQNNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICTTAVPWNTSWSNKSLDDIWNNMTWIKWEREIDNYTSLIYSLLEESQNQQEKNEQELLELDSWASLWSWFDISNWLWYIRIFIMIVGGLVGLRIVFAVLSIVNRVRQGYSPLSFQTRSPTPRGPDRPGGTEEEGGERDRDGSSRLVSGFLPLIWDDLRSLCLFS

Annotated regions:
phrase: VQARQLLSGIVQQQNNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICTTAVPWNTSWSNKSLDDIWNNMTWIKWEREIDNYTSLIYSLLEESQNQQEKNEQELLELD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASITLTVQARQLLSGIVQQQNNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICTTAVPWNTSWSNKSLDDIWNNMTWIKWEREIDNYTSLIYSLLEESQNQQEKNEQELLELDSWASLWSWFDISNWLWYIRIFIMIVGGLVGLRIVFAVLSIVNRVRQGYSPLSFQ
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKEATTTLFCASDAKAYDTEKHNVWATHACVPTDPNPQEVLMENVTEDFNIWENNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTDAKTNHTNGSNSTGTNGSDNSLKGEMKNCSFNITTTIRDKVQKEFALFYKLDLVPIDDSNKTNTSYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFALLKCNNKTFSGKGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSQNFTDNAKTIIVQLNESVEINCTRPNNNTRKSIHIGPGQAFYTTGEIIGDIRQAHCNISKTAWNNTLRQVAKKLKEKFNTTIIFNQSSGGDLEIVMHSFTCGGEFFYCNTRQLFNSTWDNSTWNDSTRNSIHDENITLPCRIKQIINMWQTVGKAMYAPPIKGQIRCSSNITGLLLERDGGNNTDTETFRPGGGNMKDNWRSELYKYKVVKIEPVGIAPTRAKRRVVQRER
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MNSTIAEAIKEEGIENYLKNQQHKSLLRFLTCGSVDDGKSTLIGRLLHDSRQVYEDQLKTLHSDSQKIGTTGEKLDFALLVDGLQAEREQGITIDVAYRYFSTPKRKFIIADTPGHEQYTRNMATGASTCDLAIILIDARRGVLEQTRRHSFIASLLGIRQFIVAVNKMDLVNFDEKVFDSIKKEYLEFASGLPKTDIRVVPISALDGENLVVNSELTPWYQGEPLLTMLENAEVGTRDLDLPFRMPVQLVSRPNLDFRGYMGTVAAGVVKPGDVVKVLPSGKESKVKRIVTFDGDLDYALPGEAVTITLEDEIDISRGDLLVAPDAETQVTQHVLANVVWMTEEPLQANRQYDIKLATRKTRGHVDAIRHRIDVNTLEKHDATELKLNEIGLLELSLTNAVGVDPYNTVRDTGSFIIIDRLSNVTIGAGMVVEALAGKTAGKAEFSEFELEFNALVRKHFPHWQALDISKL

Annotated regions:
phrase: DGLQAEREQGITIDV
type: CONSERVED_SITE
name: G_TR_CS
description: Tr-type G domain, conserved site

phrase: LANVVWMTEEPLQANRQYDIKLATRKTRGHVDAIRHRIDVNTLEKHDATELKLNEIGLLELSLTNAVGVDPYNTVRDTGSFIIIDRLSNVTIGAGM
type: DOMAIN
name: GTP-eEF1A_C
description: GTP-eEF1A, C-terminal domain

phrase: GSVDDGKSTLIGRLLHDSRQVYEDQLKTLHSDSQKIGTTGEKLDFALLVDGLQAEREQGITIDVAYRYFSTPKRKFIIADTPGHEQYTRNMATGASTCDLAIILIDARRGVLEQTRRHSFIASLLGIRQFIVAVNKMDLVNFDEKVFDSIKKEYLEFASGLPKTDIRVVPISALDGE
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: RFLTCGSVDDGKSTLIGRLLHDSRQVYEDQLKTLHSDSQKIGTTGEKLDFALLVDGLQAEREQGITIDVAYRYFSTPKRKFIIADTPGHEQYTRNMATGASTCDLAIILIDARRGVLEQTRRHSFIASLLGIRQFIVAVNKMDLVNFDEKVFDSIKKEYLEFASGLPKTDIRVVPISALDGENLVVNSELTPWYQGEPLLTMLENAE
type: DOMAIN
name: CysN_GTP-bd
description: Sulfate adenylyltransferase subunit CysN, GTP-binding domain

phrase: RFLTCGSVDDGKS
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: EQGITIDV
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: IIADTPGHEQ
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: TGASTCDLAII
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: FIVAVNKMD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: SLLRFLTCGSVDDGKSTLIGRLLHDSRQVYEDQLKTLHSDSQKIGTTGEKLDFALLVDGLQAEREQGITIDVAYRYFSTPKRKFIIADTPGHEQYTRNMATGASTCDLAIILIDARRGVLEQTRRHSFIASLLGIRQFIVAVNKMDLVNFDEKVFDSIKKEYLEFASGLPKTDIRVVPISALDGENL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: FRMPVQLVSRPNLDFRGYMGTVAAGVVKPGDVVKVLPSGKESKVKRIVTFDGDLDYALPGEAVTITLEDEIDISRGDLLV
type: DOMAIN
name: CysN_II
description: Sulfate adenylyltransferase subunit CysN, Domain II

phrase: GTVAAGVVKPGDVVKVLPSGKESKVKRIVTFDGDLDYALPGEAVTITLEDEIDISRGDL
type: DOMAIN
name: EFTu-like_2
description: Translation elongation factor EFTu-like, domain 2

phrase: KSLLRFLTCGSVDDGKSTLIGRLLHDSRQVYEDQLKTLHSDSQKIGTTGEKLDFALLVDGLQAEREQGITIDVAYRYFSTPKRKFIIADTPGHEQYTRNMATGASTCDLAIILIDARRGVLEQTRRHSFIASLLGIRQFIVAVNKMDLVNFDEKVFDSIKKEYLEFASGLPKTDIRVVPISALDGENLVVNSELTPWYQGEPLLTMLENAEVGTRD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: QVTQHVLANVVWMTEEPLQANRQYDIKLATRKTRGHVDAIRHRIDVNTLEKHDATELKLNEIGLLELSLTNAVGVDPYNTVRDTGSFIIIDRLSNVTIGAGM
type: DOMAIN
name: CysN_NoDQ_III
description: Sulfate adenylyltransferase subunit CysN, Domain III
Protein sequence:
MGYRLAIVGATGNVGRELLNILAERNFPADDVVALASSRSVGKEVSFGEKAILKVQDLEKFDFKGIDITLSSPGAKVSAVHSPRAAKAGAVVIDNTSQFRMDPDVPLVVPEVNAHAIAGWTRKGIIANPNCSTIQMVVALKPLHDAATIKRVVVATYQSTSGAGKEAMDELFGQTRAIYVNDTVEPQKFTKQIAFNVIPHIDVFMDDGSTKEEWKMVAETKKILDPRIKVTATCVRVPVFVGHAEAVNLEFDRPLDETEARAILSKANGVVVVDRREPGGYITPVEVAGDDPVYVSRIRSDPTIENGLNLWIVGDNLRKGAALNAVQIAEAMVKGQHLKAAA

Annotated regions:
phrase: LKPLHDAATIKRVVVATYQSTSGAGKEAMDELFGQTRAIYVNDTVEPQKFTKQIAFNVIPHIDVFMDDGSTKEEWKMVAETKKILDPRIKVTATCVRVPVFVGHAEAVNLEFDRPLDETEARAILSKANGVVVVDRREPGGYITPVEVAGDDPVYVSRIRSDPTIENGLNLWIVGDNLR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: RLAIVGATGNVGRELLNILAERNFPADDVVALASSRSVGKEVSFGEKAILKVQDLEKFDFKGIDITLSSPGAKVSAVHSPRAAKAGAVVIDNTSQFRMDPDVPLVVPEVNAHAIAG
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: LAIVGATGNVGRELLNILAERNFPADDVVALASSRSVGKEVSFGEKAILKVQDLEKFDFKGIDITLSSPGAKVSAVHSPRAAKAGAVVIDNTSQFRMDPDVPLVVPEVNAHAI
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MAIKKYKPTSNGRRNMTSLVYKDVITKTTPEKSLLDSQSHSAGRNNAGKMTVRHRGGGNKRQYRIIDFKRIKDDVPATVKAIEYDPNRTANIALLVYADGVKSYIIAPKGLKVGDKVQSGPEADIKTGNALPLKNIPFGTVIHNIELKPGKGGQLVRSAGTSAQLLGKANDEKYVLVRLSSGEVRMVLSVNRATIGAVGNEEHELVNVGKAGRTRWAGQRPHVRGSVMNPNDHPHGGGEGKAPVGLPSPLSPWGKKTVGKKTRSKKNKTEKFIVRHRKGSKM

Annotated regions:
phrase: KTGNALPLKNIPFGTVIHNIELKPGKGGQLVRSAGTSAQLLGKANDEKYVLVRLSSGEVRMVLSVNRATIGAVGNEEHELVNVGKAGRTRWAGQRPHVRGSVMNPNDHPHGGGEGKAPVGLPSPLSPW
type: DOMAIN
name: Ribosomal_uL2_C
description: Large ribosomal subunit protein uL2, C-terminal

phrase: GRNNAGKMTVRHRGGGNKRQYRIIDFKRIKDDVPATVKAIEYDPNRTANIALLVYADGVKSYIIAPKGLKVGDKV
type: DOMAIN
name: Ribosomal_uL2_RNA-bd_dom
description: Large ribosomal subunit protein uL2, RNA-binding domain

phrase: PHVRGSVMNPN
type: CONSERVED_SITE
name: Ribosomal_uL2_CS
description: Large ribosomal subunit protein uL2, conserved site

phrase: IKTGNALPLKNIPFGTVIHNIELKPGKGGQLVRSAGTSAQLLGKANDEKYVLVRLSSGEVRMVLSVNRATIGAVGNEEHELVNVGKAGRTRWAGQRPHVRGSVMNPNDHPHGGGEGKAPVGLPSPLSPWGK
type: DOMAIN
name: Ribosomal_uL2_C
description: Large ribosomal subunit protein uL2, C-terminal
Protein sequence:
MSKQTLILLYGGRSAEREVSVLSAESVMRAVDYNAFEVKTYFITQSGDFIKTQEFIETPGDDEKLMTNDTVEASQAIKPSDIYEEDAVVFPVLHGPMGEDGSIQGFLETLKLPYVGTNVLSSSVAMDKIMTKRILEVAGVPQVAYTGYIEGEDLEAAVAETLEKLTFPVFVKPANMGSSVGISKAENESELRSAIDLALKYDSRILIEQGVVAREIEVGILGNTTVKTTDPGEVVKDVAFYDYQAKYIDNKITMDIPARVPVEVMTQMRAYAAKAFRALGGCGLARCDFFLTEDGAIYLNELNTMPGFTQWSMYPLLWENMGLSYSDLIKELVVLGQEMFDKRESHLI

Annotated regions:
phrase: HGPMGEDGSIQ
type: CONSERVED_SITE
name: D-Ala_lig_Van_CS
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site

phrase: LGGCGLARCDFFLTEDGAIYLNELNTMP
type: CONSERVED_SITE
name: D-Ala_lig_Van_CS
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site

phrase: LILLYGGRSAEREVSVLSAESVMRAVDYNAFEVKTYFITQSGDFIKTQEFIETPGDDEKLMTNDTVEASQAIKPSDIYEEDAVVFPVLHGPMGEDGSIQGFLETLKLPYV
type: DOMAIN
name: Dala_Dala_lig_N
description: D-alanine--D-alanine ligase, N-terminal domain

phrase: KRILEVAGVPQVAYTGYIEGEDLEAAVAETLEKLTFPVFVKPANMGSSVGISKAENESELRSAIDLALKYDSRILIEQGVVAREIEVGILGNTTVKTTDPGEVVKDVAFYDYQAKYIDNKITMDIPARVPVEVMTQMRAYAAKAFRALGGCGLARCDFFLTEDGAIYLNELNTMPGFTQWSMYPLLWENMGLSYSDLIKELV
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold

phrase: LEVAGVPQVAYTGYIEGEDLEAAVAETLEKLTFPVFVKPANMGSSVGISKAENESELRSAIDLALKYDSRILIEQGVVAREIEVGILGNTTVKTTDPGEVVKDVAFYDYQAKYIDNKITMDIPARVPVEVMTQMRAYAAKAFRALGGCGLARCDFFLTEDGAIYLNELNTMPGFTQWSMYPLLWENMGLSYSDLIKEL
type: DOMAIN
name: Dala_Dala_lig_C
description: D-alanine--D-alanine ligase, C-terminal
Protein sequence:
MKQINDYKGKRVLVLGFGISGLNAAYLLQKLGATVVANDQQVPKDPRVVADLEGAGITAVTGSNPLSLAEEGFDLVVKNPGIPYDTPLVAAFVKKGTPIITELELGYQVFAGHLISVTGSNGKTTTTTLIEQMVAMGNPHRVEYAGNIGVSFSKVAEELGPDDTIVTEASSFQLLGAPTYRPHIAVITNIFANHLDYHKTRQNYIDAKLGITRNQTKDDYLVINWDKEEWQKLAKRTNATVVPFSRLAKSQEGAYQKGGDLYWRQERIMAAKDVVLIGPQNVENALAAIAAAKLSGVANEAIVRVLTTFTGVRHRLQYVLDYEGRRFYNDSKSTDIEATEVALQGFEQPVILLAGGLDRGYTFERLVPYFREHVKALIVFGESKDKMKAAGEQAGVKTIVESTDAVTAVPEAWRLSEPGDVILLSPANASWDQFPNFEVRGDRFIEAVEQLTGKKEEN

Annotated regions:
phrase: HRLQYVLDYEGRRFYNDSKSTDIEATEVALQGFEQPVILLAGGLDRGYTFERLVPYFREHVKALIVFGESKDKMKAAGEQAGVKTIVESTDAVTAVPEAWRLSEPGDVILLSP
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: VTGSNGKTTTTTLIEQMVAMGNPHRVEYAGNIGVSFSKVAEELGPDDTIVTEASSFQLLGAPTYRPHIAVITNIFANHLDYHKTRQNYIDAKLGITRNQTKDDYLVINWDKEEWQKLAKRTNATVVPFSRLAKSQEGAYQKGGDLYWRQERIMAAKDVVLIGPQNVENALAAIAA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central
Protein sequence:
MTANLLDFDLDGLAVFCERLGEKRFRATQLFRWIHQKGAQDFDQMSDLAKSLREKLKTCAQVQPLTPISQHDSADGTIKWLFDVGDGNAVETVFIPEDDRGTLCVSSQAGCAVGCRFCSTGHQGFSRNLTAGEIIAQLWFAEHFLRKKFNTTERVISNVVMMGMGEPLQNYHALVPALRTMLDDHGYGLSRRRVTVSTSGVVPMMDRLGDDCPVALAVSLHAPTDALRDNLVPLNRKYPLHELMDACRRYLAHAPRDFITFEYCMLDGVNDQPEHAQALIDFVKPKRGAGEPVPCKFNLIPFNPFPASGLTRSSAATVKAFAEQLSAAGIITTVRKTRGDDIDAACGQLAGDVKDRTQVDARMAKQRVISLTQVPS

Annotated regions:
phrase: NLLDFDLDGLAVFCERLGEKRFRATQLFRWIHQKGAQDFDQMSDLAKSLREKLKTCAQ
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: EDDRGTLCVSSQAGCAVGCRFCSTGHQGFSRNLTAGEIIAQLWFAEHFLRKKFNTTERVISNVVMMGMGEPLQNYHALVPALRTMLDDHGYGLSRRRVTVSTSGVVPMMDRLGDDCPVALAVSLHAPTDALRDNLVPLNRKYPLHELMDACRRYLAHAPRDFITFEYCMLDGVNDQPEHAQALIDFVKPKRGAGEPVPCKFNLIPFNPFPASGLTRSSAATVKAFAEQLSAAGIITTVRKTRGD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SSQAGCAVGCRFCSTGHQGFSRNLTAGEIIAQLWFAEHFLRKKFNTTERVISNVVMMGMGEPLQNYHALVPALRTMLDDHGYGLSRRRVTVSTSGVVPMMDRLGDDCPVALAVSLHAPTDALRDNLVPLNRKYPLHELMDACRRYLAHAPRDFITFEYCMLDGVNDQP
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MIGKLSGRVDSSYDDYVIIDVSGVGYRVFASAKTLSKLSEGESYKLFIETHVREDHINLYGFLSLEEKSFFNLLQSVNGIGTRMALSILSTLTPTDIQIAINNEDKNIFKAISGVGAKLAERIVRELSDKVAKISSSSAAIKDSLNIKGITPVASSEVIKALINMGFSRFEAQNAVQEIITKNPEISIDELIRTALKNRNSNF

Annotated regions:
phrase: ASSEVIKALINMGFSRFEAQNAVQEIITKNPEISIDELIRTAL
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal

phrase: MIGKLSGRVDSSYDDYVIIDVSGVGYRVFASAKTLSKLSEGESYKLFIETHVREDHINLY
type: DOMAIN
name: DNA_helicase_Holl-junc_RuvA_I
description: DNA helicase, Holliday junction RuvA type, domain I, bacterial

phrase: NLLQSVNGIGTRMALSILS
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: NIFKAISGVGAKLAERIVR
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: ASSEVIKALINMGFSRFEAQNAVQEIITKNPEISIDELIRTAL
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal
Protein sequence:
MKIFNSLTKQKEIFKPIESGKVKLYVCGMTVYDYMHIGHGRSWIIFDMVVRYLRMRGYEVTFVRNITDIDDKIIKRAGENKESPAALAERFIQILHEDEKALRVLSPDQEPRATQYVPEIIKLIQKLLDNQYAYTGQNGDVFFDVRRFKDYGKLSHRHLDKLQAGARVEVSDSKRDPLDFVLWKKAKPGEPKWDSPWGEGRPGWHIECSAMSSSILGQPFDIHGGGLDLKFPHHENEIAQSEAGEEKPFVKLWMHAGLLEINKEKMSKSLGNIISIREALKESDVEVLRYFLLSGHYRNPLSYSKENLENGRLALERFYLALRGLPVVNHEKTSSYTDRFYEAMDDDFNTPIAFALLFEMVREINRFRDNNQIEKAAVLAAELKCLGNIFGLLQYSPEQFLQGAKKEADVQEIKKLIDQRNEARAKKDWKTADQIRDQLTDLGVAIEDSSDGTSWRQE

Annotated regions:
phrase: FKPIESGKVKLYVCGMTVYDYMHIGHGRSWIIFDMVVRYLRMRGYEVTFVRNITDIDDKIIKRAGENKESPAALAERFIQILHEDEKALRVLSPDQEPRATQYVPEIIKLIQKLLDNQYAYTGQNGDVFFDVRRFKDYGKLSHRHLDKLQAGARVEVSDSKRDPLDFVLWKKAKPGEPKWDSPWGEGRPGWHIECSAMSSSILGQPFDIHGGGLDLKFPHHENEIAQSEAGEEKPFVKLWMHAGLLEINKEKMSKSLGNIISIREALKESDVEVLRYFLLSGHYRNPLSYSKENLE
type: DOMAIN
name: tRNA-synt_1_cat_dom
description: tRNA synthetases class I, catalytic domain

phrase: KIFNSLTKQKEIFKPIESGKVKLYVCGMTVYDYMHIGHGRSWIIFDMVVRYLRMRGYEVTFVRNITDIDDKIIKRAGENKESPAALAERFIQILHEDEKALRVLSPDQEPRATQYVPEIIKLIQKLLDNQYAYTGQNGDVFFDVRRFKDYGKLSHRHLDKLQAGARVEVSDSKRDPLDFVLWKKAKPGEPKWDSPWGEGRPGWHIECSAMSSSILGQPFDIHGGGLDLKFPHHENEIAQSEAGEEKPFVKLWMHAGLLEINKEKMSKSLGNIISIREALKESDVEVLRYFLLSGHYRNPLSY
type: DOMAIN
name: tRNA-synt_1_cat_dom
description: tRNA synthetases class I, catalytic domain

phrase: RFYEAMDDDFNTPIAFALLFEMVREINRFRDNNQIEKAAVLAAELKCLGNIFGLL
type: DOMAIN
name: Cys-tRNA-synt_Ia_DALR
description: Cysteinyl-tRNA synthetase, class Ia, DALR

phrase: RFYEAMDDDFNTPIAFALLFEMVREINRFRDNNQIEKAAVLAAELKCLGNIFGLLQYSPEQF
type: DOMAIN
name: Cys-tRNA-synt_Ia_DALR
description: Cysteinyl-tRNA synthetase, class Ia, DALR

phrase: EIKKLIDQRNEARAKKDWKTADQIRDQLTDLGVAIEDSSDGTSW
type: DOMAIN
name: CysS_C
description: Cysteinyl-tRNA ligase, anticodon binding domain
Protein sequence:
MDNVHTVTGKRIILGVSGGIAAYKAAVLLRRLTEAGNRVTVIPTDAALRMVGKATWEALSGNSVSADVFDGADRVNHVRLGQEADLCLVVPATADTIAKMAHGIADNLLLTTLLSVSCPVAVAPAMHTQMWNNPATRHNIDLLRGRGTVILGPVSGRLTGRDSGPGRMMEPEEIIRRISALPDGKIHGADLRGKTVLISGGGTREPIDPVRFIGNRSSGRMAAELARSAALRGGKTILVSANTEAEILRSLPGSVRNVPVQTAAELAREMQKYAACADIVIMAAAVCDYRTQCAGDAKIKRGKDPITLTLVPNPDILLDLAENRRREKQLVVGFAAETGSAGKDFLQLGREKARRKKADFLAVNLVGEEQGFGPVKTELFLLDREGREKTRFSGEKSTVARDMMEFLAENLYPAENRP

Annotated regions:
phrase: LRGKTVLISGGGTREPIDPVRFIGNRSSGRMAAELARSAALRGGKTILVSANTEAEILRSLPGSVRNVPVQTAAELAREMQKYAACADIVIMAAAVCDYRTQCAGDAKIKRGKDPITLTLVPNPDILLDLAENRRREKQLVVGFAAETGSAGKDFLQLGREKARRKKADFLAVNLVGEEQGFGPVKTELF
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal

phrase: KRIILGVSGGIAAYKAAVLLRRLTEAGNRVTVIPTDAALRMVGKATWEALSGNSVSADVFDGADRVNHVRLGQEADLCLVVPATADTIAKMAHGIADNLLLTTLLSVSCPVAVAPAMHTQMWNNPATRHNIDLLRGRGTVILGPVSGRLTGRDSGPGRMMEPEEIIRR
type: DOMAIN
name: Flavoprotein
description: Flavoprotein
Protein sequence:
MTRFLNYQFNLILLAVSFFTRLPVPTAIDYSPQKLHQAGRYFPLVGWLLAALLSAFYCFMLPYLGREPTVCLLIIFSLMLTGAIHEDGLADTADGFWGGQSITRKLTIMKDSQIGTYGTCALICALLSKFILLSSLAADQHLLLALAIAYPLSRGLAISHVQHLAYARKNSDNSKSDSLAQPMQPRVLLWLLASSVPAVLWLPLSSAILVIVSACVLRFALKHWFKKHIDGYTGDCLGFAQQTQELLIYLLLIITLPKTVNEQTIGFLL

Annotated regions:
Protein sequence:
MAEYQNIFTRVQVAGPAHMGVPLPEQDSPRTGKKPWQIHLLGRLGMAQIGPIYLGPLGILSIVFGSLAIMIIGFNMLASVGWNPIEFFRQFFWLALEPPSPKYGLKLPPLNDGGWWLMAGLFLTISILLWWVRMYTRARALGMGTHVAWAFAAAIWLYLVLGFIRPVLMGSWSEAVPFGIFPHLDWTAAFSLRYGNLFYNPFHALSIAFLYGATLLFAMHGATILAVSRFGGERELEQIADRGTASERAQLFWRWTMGFNATTESIHRWAWWFAVLCPLCGGIGILLSGTVVDNWYLWAVKHGVAPSYPAVFAPTIDPATLQGVK

Annotated regions:
phrase: NLFYNPFHALSIAFLYGATLLFAMHG
type: CONSERVED_SITE
name: Photo_RC_L/M_CS
description: Photosynthetic reaction centre, L/M, conserved site
Protein sequence:
MEVFPLLLFLSFCWSRTWDLATADSIIHIGAIFDESAKKDDEVFRTAVGDLNQNEEILQTEKITFSVTFVDGNNPFQAVQEACELMNQGILALVSSIGCTSAGSLQSLADAMHIPHLFIQRSTAGTPRSGCGLTRSNRNDDYTLSVRPPVYLNEVILRVVTEYAWQKFIIFYDSEYDIRGIQEFLDKVSQQGMDVALQKVENNINKMITTLFDTMRIEELNRYRDTLRRAILVMNPATAKSFISEVVETNLVAFDCHWIIINEEINDVDVQELVRRSIGRLTIIRQTFPVPQNISQRCFRGNHRISSSLCDPKDPFAQNMEISNLYIYDTVLLLANAFHKKLEDRKWHSMASLSCIRKNSKPWQGGRSMLETIKKGGVNGLTGDLEFGENGGNPNVHFEILGTNYGEELGRGVRKLGCWNPVTGLNGSLTDKKLENNMRGVVLRVVTVLEEPFVMVSENVLGKPKKYQGFSIDVLDALSNYLGFNYEIYVAPDHKYGSPQEDGTWNGLVGELVFKRADIGISALTITPDRENVVDFTTRYMDYSVGVLLRRAEKTVDMFACLAPFDLSLWACIAGTVLLVGLLVYLLNWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGAWWLFALIVISSYTANLAAFLTITRIESSIQSLQDLSKQTDIPYGTVLDSAVYQHVRMKGLNPFERDSMYSQMWRMINRSNGSENNVLESQAGIQKVKYGNYAFVWDAAVLEYVAINDPDCSFYTVGNTVADR

Annotated regions:
phrase: VLRVVTVLEEPFVMVSENVLGKPKKYQGFSIDVLDALSNYLGFNYEIYVAPDHKYGSPQEDGTWNGLVGELVFKRADIGISALTITPDRENVVDFTTRYMDYSVGVLLR
type: DOMAIN
name: Glu/Gly-bd
description: Ionotropic glutamate receptor, L-glutamate and glycine-binding domain

phrase: EVFRTAVGDLNQNEEILQTEKITFSVTFVDGNNPFQAVQEACELMNQGILALVSSIGCTSAGSLQSLADAMHIPHLFIQRSTAGTPRSGCGLTRSNRNDDYTLSVRPPVYLNEVILRVVTEYAWQKFIIFYDSEYDIRGIQEFLDKVSQQGMDVALQKVENNINKMITTLFDTMRIEELNRYRDTLRRAILVMNPATAKSFISEVVETNLVAFDCHWIIINEEINDVDVQELVRRSIGRLTIIRQTFPVPQNISQRCFRGNHRISSSLCDPKDPFAQNMEISNLYIYDTVLLLANAFHKKLEDRKWHSMASLSCIRKNSKPWQGGRSMLETIKKGGVNGLTGDLEFGENGGNPNVHFEILGT
type: DOMAIN
name: ANF_lig-bd_rcpt
description: Receptor, ligand binding region

phrase: LSLWACIAGTVLLVGLLVYLLNWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGAWWLFALIVISSYTANLAAFLTITRIESSIQSLQDLSKQTDIPYGTVLDSAVYQHVRMKGLNPFERDSMYSQMWRM
type: DOMAIN
name: Iontro_rcpt_C
description: Ionotropic glutamate receptor, C-terminal

phrase: VLRVVTVLEEPFVMVSENVLGKPKKYQGFSIDVLDALSNYLGFNYEIYVAPDHKYGSPQEDGTWNGLVGELVFKRADIGISALTITPDRENVVDFTTRYMDYSVGVLLRRAEKTVDMFACLAPFDLSLWACIAGTVLLVGLLVYLLNWLNPPRLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGAWWLFALIVISSYTANLAAFLTITRIESSIQSLQDLSKQTDIPYGTVLDSAVYQHVRMKGLNPFERDSMYSQMWRMINRSNGSENNVLESQAGIQKVKYGNYAFVWDAAVLEYVAINDPDCSFYTVGNTVAD
type: DOMAIN
name: Iontro_rcpt_C
description: Ionotropic glutamate receptor, C-terminal

phrase: PFVMVSENVLGKPKKYQGFSIDVLDALSNYLGFNYEIYVAPDHKYGSPQEDGTWNGLVGELV
type: DOMAIN
name: Glu/Gly-bd
description: Ionotropic glutamate receptor, L-glutamate and glycine-binding domain
Protein sequence:
MEGESTLGVLSGFVLGALTFHHLNTDSDTEGFLLGEMKGEAKNSITDSQMDNVKVVYTIDIQKYIPCYRLFSFYNSLGEVNEHALKKVLSNVRKTVVGWYKFRRHSDQIMTFREQLLHRNLQTHLSSPELVFLLLTPSITTESCSTHCLEHALYKPQRGLFHRVPLVVTNLGMSDQLGYKTEPASCTSTVFSRAVRTHSSQFFNEDGSLKEVHKINEMYAAVQEELKSICQKVEQSEREVEKLLMDVNQLKEVRRTQQARATGAGEKNVQRNPQENILLCQALRTFFPESEVLHSCVISLKNRHISPSGCNVNHHVDVVDQLTLMVEYVYSPEASPVPTAQLRKRKALDTHDQGSVKRPRLLETESRPSVAASRSRHQDKASSSSLDIDIEMGSPEDDADYPRSPTF

Annotated regions:
phrase: LGVLSGFVLGALTFHHLNTDSDTEGFLLGEMKGEAKNSITDSQMDNVKVVYTIDIQKYIPCYRLFSFYNSLGEVNEHALKKVLSNVRKTVVGWYKFRRHSDQIMTFREQLLHRNLQTHLSSPELVFLLLTPSITTESCSTHCLEHALY
type: DOMAIN
name: MPN
description: MPN domain
Protein sequence:
MDSAPNFIPRLLLLSLLIVSIPLTSSQSDANTTNPSPSPPSDSDLCNGVFVSYTHTKGSKIPPNDTANQPYRFESVITVLNHGRDELKSWRVFVKFAHREILVSASNAVLSDGSSLPVSVENGTVFAGYPSSDLKSAIQTAGDVTQMQARVELVGTQFGVAPPNVPLPKNITLATDGWKCPKATQKGTNVLQVCCIPDPDYDNREIIDNEFLPRKDGDLTIMYDVVRSYSSNYMAQVTMENHNPLGRLDNWKLSFDWMRDEFIYTMKGAYPSIVDSSDCVDGPQAKHYQDLDFSNVLSCARRPTVIDLPPTKYNDSTFGLIPFCCRNGTILPRSMDPSKSSSVFQMQVYKMPPDLNISALSPPQNWRINGTLNPDYKCGPPVRVSPSQFVDPSGLPSNRTAFASWQVVCNITQPKDASPRCCVSFSAYFNDSIVPCKTCACGCSSNKAARACSATAPSLLLPQQALLVPFENRTELTVAWAYLKQRPVPNPMPCGDNCGVSINWHLATDYRGGWTARVTVFNWGETDFVDWFTAVQMKNAAPGFEKAYSFNASTIGINGKNNTIFMEGLPGLNYLVAERDGENPLKNPRIPGKQQSVMSFTKKLTPGINVPGGDGFPSKVFFNGEECSLPTILPMRSSQHRKHISVFLLALPVLALLILRA

Annotated regions:
phrase: RCCVSFSAYFNDSIVPCKTCACGCSSNKAARACSATAPSLLLPQQALLVPFENRTELTVAWAYLKQRPVPNPMPCGDNCGVSINWHLATDYRGGWTARVTVFNWGETDFVDWFTAVQMKNAAPGFEKAYSFNASTIGINGKNNTIFMEGLPGLNYLVAERDGENPLKNPRIPGKQQSVMSFTKKLTPGINVPGGDGFPSKVFFNGEECSLPTIL
type: DOMAIN
name: COB_C
description: COBRA, C-terminal domain