nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTYEIHPLPIILMSDFDIVVIGAGHAGCEAALAAARLGHKTLLAVMNVDTIGAMSCNPAIGGLAKGHLVREIDALGGEMARVIDATSIQFRRLNTSKGPAVQSSRAQADRLLYRLQMKSVIEHQENLTVSQTEVNGFIVEDGKITGVTTTIDEKISVKAAIVATGTFLNGLVHIGLKNFPAGRLGDGPSTGLADWFYDNGFAVGRMKTGTVPRIDSLTIDYSELEAQESDMPPAHFSFDSQGKGYTLPQLPCYITYTNEKTHEIIRKGIDQSPLYAGIIQGIGARYCPSIEDKIMRFPEKDRHQVFLEPEGLDTVEVYPNGLPTSLPLEVQIEMLQSIKGLENARIIRPGYAIEYDYIDPLGLRPSLATKKIENLYLAGQINGTSGYEEAAAQGLMAGINATRYLEEREPLILDRSQAYIGVLIDDLVTCGTKEPYRLFTSRAEYRLLLREDNADSRLCQIGKDIGLLDEDKHQRYLIKQAAIDAGCATLDAISIKPTAEVNRILNDAASADLKQKSALSSLLRRPEINITFLQKLPLTAGDKEAVIALANSAVCQEVQVRIKFKGYLQRQEEQVQRFKRMETLKLPEDLNYAQLSGLSNEVVEKLSTIRPISLGQASRISGITPAAVSVLQVHLRKLNYLKSNDKI

Annotated regions:
phrase: AGQINGTSGYEEAAAQGLMAGIN
type: CONSERVED_SITE
name: MnmG-rel_CS
description: MnmG-related, conserved site

phrase: DIVVIGAGHAGCEAALAAARLGHKTLLAVMNVDTIGAMSCNPAIGGLAKGHLVREIDALGGEMARVIDATSIQFRRLNTSKGPAVQSSRAQADRLLYRLQMKSVIEHQENLTVSQTEVNGFIVEDGKITGVTTTIDEKISVKAAIVATGTFLNGLVHIGLKNFPAGRLGDGPSTGLADWFYDNGFAVGRMKTGTVPRIDSLTIDYSELEAQESDMPPAHFSFDSQGKGYTLPQLPCYITYTNEKTHEIIRKGIDQSPLYAGIIQGIGARYCPSIEDKIMRFPEKDRHQVFLEPEGLDTVEVYPNGLPTSLPLEVQIEMLQSIKGLENARIIRPGYAIEYDYIDPLGLRPSLATKKIENLYLAGQINGTSGYEEAAAQGLMAGINATRYLEE
type: DOMAIN
name: MnmG_N
description: MnmG, N-terminal domain

phrase: QRFKRMETLKLPEDLNYAQLSGLSNEVVEKLSTIRPISLGQASRISGITPAAVSV
type: DOMAIN
name: MnmG_C
description: tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG, C-terminal

phrase: GARYCPSIEDKIMR
type: CONSERVED_SITE
name: MnmG-rel_CS
description: MnmG-related, conserved site

phrase: DKHQRYLIKQAAIDAGCATLDAISIKPTAEVNRILNDAASADLKQKSALSSLLRRPEINITFLQKLPLTAGDKEAVIALANSAVCQEVQVRIKFKGYLQRQ
type: DOMAIN
name: GIDA_C_N
description: tRNA uridine 5-carboxymethylaminomethyl modification enzyme, C-terminal, N-terninal subdomain

phrase: IKFKGYLQRQEEQVQRFKRMETLKLPEDLNYAQLSGLSNEVVEKLSTIRPISLGQASRISGITPAAVSVLQ
type: DOMAIN
name: MnmG_C_subdom
description: tRNA uridine 5-carboxymethylaminomethyl modification enzyme, C-terminal subdomain
Protein sequence:
MRKVGITLSVVALVIMGFVAGCIGGTQTQGEKVKVAVLFDVGGRGDLSFNDMAYLGAERAKKELGVEVEYMTPKSREDMVPLLKQLAESKEYDLLVLIGFLWTTPLDQVADQYPDQKFALIDSTTGKVRENEVDILFREQEAAALIGVIASGMAYELGGDTIGAVAGMDIPPLWKFHIGYLYGAKYFEKKTGKPVKLLWQYTGTFTDTQVGYTTGMQLLQQGAKVLYGLAGLTHVGMFDAVIDWNKQGKGKALAIGQDASQEWYAPEYIPISGAKRVDVAVYTAIEMVVKNQWKGGIMTLGLKEGGVGYWNLDGVRQFAEFAQEGGKLKDMTPEDVVRIVKEQREKYIKPEVWEIVRELEEKIKNGEIKFKTPQSHDEYEQIIKELEKGNLDAALEKE

Annotated regions:
phrase: KVAVLFDVGGRGDLSFNDMAYLGAERAKKELGVEVEYMTPKSREDMVPLLKQLAESKEYDLLVLIGFLWTTPLDQVADQYPDQKFALIDSTTGKVRENEVDILFREQEAAALIGVIASGMAYELGGDTIGAVAGMDIPPLWKFHIGYLYGAKYFEKKTGKPVKLLWQYTGTFTDTQVGYTTGMQLLQQGAKVLYGLAGLTHVGMFDAVIDWNKQGKGKALAIGQDASQEWYAPEYIPISGAKRVDVAVYTAIEMVVKNQWKGGIMTLGLKEGGVGY
type: DOMAIN
name: PnrA-like
description: ABC transporter substrate-binding protein PnrA-like
Protein sequence:
MKKVTGQIKLQLPAGKANPAPPVGPALGQHGVNIMEFCKQFNAATQAQAKEALIIPVIITVYQDRSFTFQLKTPPAAILLKKAAGLHTEKKKGSGAHKPGKEKVGQVTRKQVEQIAKTKMQDMTAGSLEAAMRTVEGTALSMGIDVVG

Annotated regions:
phrase: KTPPAAILLKKAAGLHTEKKKGSGAHKPGKEKVGQVTRKQVEQIAKTKMQDMTAGSLEAAMRTVEGTALSMGID
type: DOMAIN
name: Ribosomal_uL11_C
description: Large ribosomal subunit protein uL11, C-terminal

phrase: RTVEGTALSMGIDVV
type: CONSERVED_SITE
name: Ribosomal_uL11_CS
description: Large ribosomal subunit protein uL11, conserved site

phrase: IKLQLPAGKANPAPPVGPALGQHGVNIMEFCKQFNAATQAQAKEALIIPVIITVYQDRS
type: DOMAIN
name: Ribosomal_uL11_N
description: Large ribosomal subunit protein uL11, N-terminal
Protein sequence:
MLVDNQTSTTTNLVGTKRKSPENDFIMTIDIAGDDDFVDDDENDDDEDLKEDFFFEESDKPQLPWDFAPTIEKMKQQTHKKTDGQTSLEDKINQRKTVKKLKADDDKSVTTKTTNNNKSKKSNNNDNDDDDEEVNEEEEEEEEEEDNENEKEINKKQQQQQQQSNKQTTDKIKVLQSNRKLKKIVEEELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLLPVLERLLFRDSEYRAIRVLILLPTRELALQCQSVMENLAQFSNITSCLIVGGLSNKAQEVELRKSPDVVIATPGRLIDHLLNAHGIGLDDLEILILDEADRLLDMGFKDEINKIVESCPTNRQTMLFSATLNDEVKTLAKLSLQQPIRVQVDALMQVTSTLEQEFVKIKPQHLSDRPAILLSLCTRVFNQGGTIIFCRSKKEVHRLRIIFGLSDLKAAELHGNLSQEQRFDSLQQFRDGQVNYLLASDVASRGLDIIGVKTVINYNMPNNMANYIHRVGRTARAGMDGKSCSFITDNDRKLLKDIVTKARNKAKSRSVSQDNVNFWRNRIEELTEDIKSIVREEMKEADLRKAEKTLDKAEKIISNADANVETPKVWYKTKQEEDKSKELWKIENNIVNPGKKLKAPIDVTGVNNVPSIKKLKQKKDPYYGLSRKQRRHRQFKEEFEREQQEERKRKGGDDGDDNEEIDSGKMFERSQRAQKSSGKETKRIESLRRNYMAGGALTDQEKQRVDNKKSKKNKRMIVNKKEKKQRLSKK

Annotated regions:
phrase: IPLALNGKDILASASTGSGKTAAFLLPVLERLLFRDSEYRAIRVLILLPTRELALQCQSVMENLAQFSNITSCLIVGGLSNKAQEVELRKSPDVVIATPGRLIDHLLNAHGIGLDDLEILILDEADRLLDMGFKDEINKIVESCPTNRQTMLFSATLNDEVKTLAKLSLQQPIR
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: TPIQAKAIPLALNGKDILASASTGSGKTAAFLLPVLERLLFRDSEYRAIRVLILLPTRELALQCQSVMENLAQFSNITSCLIVGGLSNKAQEVELRKSPDVVIATPGRLIDHLLNAHGIGLDDLEILILDEADRLLDMGFKDEINKIVESCPTNRQTMLFSATLNDEVK
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: LCTRVFNQGGTIIFCRSKKEVHRLRIIFGLSDLKAAELHGNLSQEQRFDSLQQFRDGQVNYLLASDVASRGLDIIGVKTVINYNMPNNMANYIHRVGRTARA
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: KKEVHRLRIIFGLSDLKAAELHGNLSQEQRFDSLQQFRDGQVNYLLASDVASRGLDIIGVKTVINYNMPNNMANYIHRVGRTARA
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: GFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLLPVLERLLFRDSEYRAIRVLILLPTRELALQCQSVMENLAQFSNITSCLIVGGLSNKAQEVELRKSPDVVIATPGRLIDHLLNAHGIGLDDLEILILDEADRLLDMGFKDEINKIVESCPTNRQTMLFSATLNDEVKTLAKLSLQQPIRVQVDALMQVTSTLEQ
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: PTFEELHLSRPLLKAVQKLGFSQPTPIQ
type: DOMAIN
name: RNA_helicase_DEAD_Q_motif
description: RNA helicase, DEAD-box type, Q motif

phrase: TLEQEFVKIKPQHLSDRPAILLSLCTRVFNQGGTIIFCRSKKEVHRLRIIFGLSDLKAAELHGNLSQEQRFDSLQQFRDGQVNYLLASDVASRGLDIIGVKTVINYNMPNNMANYIHRVGRTARAGMDGKSCSFITDNDRKLLKDIVTKARNKAKSRSVSQDNV
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: ILDEADRL
type: CONSERVED_SITE
name: RNA-helicase_DEAD-box_CS
description: ATP-dependent RNA helicase DEAD-box, conserved site
Protein sequence:
MKLYNLKKKQDQVNFSKAVKLGLGKNQGLFFPKELPILTKEQLYKLLKMDFLTRSSKILSMFIGDEIHYSELTKRIKNAFSFTTPKIVSISKNIACFELFHGPTLAFKDFGARFMAQILSFLNHDKNDTITILTATSGDTGAAVAHAFFKMKNVRVIILYPKGKISELQEKLFCTLGENIITIAVNGSFDECQKLVKQAFNDDQLRIETGLNSANSINISRLLAQICYYFEAFALLTKKQQKNLVISVPCGNFGNLTAGLLAKALGLPIKSFIASTNSNDTVPRFLKTGFWKPNNTVSTISNAMDISQPNNWPRVEELFKRKFWSLKTLKYGSVSDILTKKSLKKLAFLGYVSEPHAAVAYYTLKNKLKQNEFGLFLGTAHPAKFKKTIEKILQITLFLPSKLRNQIKLPLLSHNIRPDFSKLKKFLLEK

Annotated regions:
phrase: ELFHGPTLAFKDFG
type: BINDING_SITE
name: Ser/Thr_deHydtase_PyrdxlP-BS
description: Serine/threonine dehydratase, pyridoxal-phosphate-binding site

phrase: KKQDQVNFSKAVKLGLGKNQGLFFPKELPILTKEQLYKLLKMDFLTRSSKILSMFIGDEIHYSELTKRIKNA
type: DOMAIN
name: Thr_synth_N
description: Threonine synthase, N-terminal

phrase: FHGPTLAFKDFGARFMAQILSFLNHDKNDTITILTATSGDTGAAVAHAFFKMKNVRVIILYPKGKISELQEKLFCTLGENIITIAVNGSFDECQKLVKQAFNDDQLRIETGLNSANSINISRLLAQICYYFEAFALLTKKQQKNLVISVPCGNFGNLTAGLLAKALGLPIKSFIASTNSNDTVPRFLKTGFWKPNNTVSTISNAMDISQPNNWPRVEELFKRKFWSLKTLKYGSVSDILTKKSLKKLAFLGYVSEPHAAVAYYTLKNKLK
type: DOMAIN
name: TrpB-like_PALP
description: Tryptophan synthase beta chain-like, PALP domain
Protein sequence:
MIIMRNYKFKLEPLKQCQEAFKRYTVHSTALYIIALQANWSRRLIYKLSLYFCKIKNCYTTFKFEQSNRFIITKAERIIKIQHLIRFKDIVNNFISLINILLVLIFCINLSGCNASKKLSYSNKYSYKELSKDDPHNLTYIGHYKVGKNYKIKGKIYKPHTPKYFTETGYASWYGGRKDGFHGKTTANGDRFNRNLLTAAHKTLPLPCLVKVTNKVNNKSVILMVNDRGPFKKNRIIDVSQKAAEILAFKNQGVTKVRIEYLPNETEKFLKKINLKKPENKTFAKNHKKSLFTQITKNNQCSINCHIKLVNLKYKLAVNP

Annotated regions:
phrase: IKNCYTTFKFEQSNRFIITKAERIIKIQHLIRFKDIVNNFIS
type: DOMAIN
name: RPE5
description: Rickettsia palindromic element 5

phrase: GYASWYGGRKDGFHGKTTANGDRFNRNLLTAAHKTLPLPCLVKVTNKVNNKSVILMVNDRGPFKKNRIIDVSQKAAEILAFKNQGVTKVRIEYLPNETEKFLKKINLKKPENKTFAKNHKKSLFTQ
type: DOMAIN
name: RplA
description: Rare lipoprotein A

phrase: TETGYASWYGGRKDGFHGKTTANGDRFNRNLLTAAHKTLPLPCLVKVTNKVNNKSVILMVNDRGPFKKNRIIDVSQKAAEILAFKNQGVTKVR
type: DOMAIN
name: RlpA-like_DPBB
description: RlpA-like protein, double-psi beta-barrel domain
Protein sequence:
MADTSECQSDKTVKEEPFQSVKTRKRRKNDKEEEMDTVESRARPSFPPVKAQKLAGGKSETRKIPVPSHRYTPLKENWMKIFTPVVEHLKLQIRFNLGSRHVEIRASKETSDIGAVQKAADFVQAFILGFEVEDALALIRLDDLFLESFEIADVKPLKGDHLSRAIGRVAGKGGKTKFTIENVTKTRIVLAETKIHILGSFQNIKIARTAICNLILGSPPSKVYGNMRAVASRSAERF

Annotated regions:
phrase: ETRKIPVPSHRYTPLKENWMKIFTPVVEHLKLQIRFNLGSRHVEIRASKETSDIGAVQKAADFVQAFILGFEVEDALA
type: DOMAIN
name: KH-I_PNO1_first
description: PNO1, first type I KH domain

phrase: DLFLESFEIADVKPLKGDHLSRAIGRVAGKGGKTKFTIENVTKTRIVLAETKIHILGSFQNIKIARTAICNLI
type: DOMAIN
name: KH_dom
description: K Homology domain

phrase: FLESFEIADVKPLKGDHLSRAIGRVAGKGGKTKFTIENVTKTRIVLAETKIHILGSFQNIKIARTAICNLILGSPPSKVYGNMRAVAS
type: DOMAIN
name: KH_PNO1_2nd
description: PNO1, second type I KH domain

phrase: RLDDLFLESFEIADVKPLKGDHLSRAIGRVAGKGGKTKFTIENVTKTRIVLAETKIHILGSFQNIKIARTAICNLILGSPPSKVYGNMRAVASRS
type: DOMAIN
name: KH_PNO1_2nd
description: PNO1, second type I KH domain
Protein sequence:
MKSVLAGKHIVLGVCGGIAAYKSIELLRLFQKAGADVKVIMTANAENFVGPMTFEAISGHPVFLGMYGSHADGEMRHIAWAESADAVVIAPATANIIGKLACGIADDALTTFMLAVTAPKILCPSMNTHMYENRAVQRNIDTLEGDGFILVEPGQGELACGAVGAGRLPEPAFILNRVADCFYPKDLKGKKVMVTAGPTREPIDPVRFVSNPSSGKMGYAIARAAAARGAKVLLISGPTALNCPFGVSRIDVTTAGEMADVVFEHAENADIIIKVAAVSDYTPSEKFAHKIKKGQDMINVPMEKTVDILAELGRRKTRQVLVGFAAETRELETYATAKLKQKNLDMIAGNLVGDASSGFNSDNNKIKLFYRDGSIEDLPVMDKDTAAHLIFDRIRDRIIHSNTHPKGEV

Annotated regions:
phrase: LKGKKVMVTAGPTREPIDPVRFVSNPSSGKMGYAIARAAAARGAKVLLISGPTALNCPFGVSRIDVTTAGEMADVVFEHAENADIIIKVAAVSDYTPSEKFAHKIKKGQDMINVPMEKTVDILAELGRRKTRQVLVGFAAETRELETYATAKLKQKNLDMIAGNLVGDASSGFNSDNNKIK
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal

phrase: KHIVLGVCGGIAAYKSIELLRLFQKAGADVKVIMTANAENFVGPMTFEAISGHPVFLGMYGSHADGEMRHIAWAESADAVVIAPATANIIGKLACGIADDALTTFMLAVTAPKILCPSMNTHMYENRAVQRNIDTLEGDGFILVEPGQGELACGAVGAGRLPEPAFILNRVA
type: DOMAIN
name: Flavoprotein
description: Flavoprotein
Protein sequence:
MSKVLTSLPTGERVGIAFSGGLDTSVAVAWMRDKGAVPCTYTADIGQYDEPDIASVPDRAKTYGAEVARLVDCRAALVEEGLAALTCGAFHIRSGGRAYFNTTPLGRAVTGTLLVRAMLEDDVQIWGDGSTFKGNDIERFYRYGLLANPQLRIYKPWLDADFVTELGGRKEMSEWLVAHDLPYRDSTEKAYSTDANIWGATHEAKTLEHLDTGVETVEPIMGVRFWDPSVEIAPEDVTIGFDQGRPVTINGKEFASAVDLVMEANAVGGRHGMGMSDQIENRIIEAKSRGIYEAPGMALLHAAYERLVNAIHNEDTLAQYHTEGRRLGRLMYEGRWLDPQSLMIRESLQRWVGSAVTGEVTLRLRRGEDYSILDTTGPAFSYHPDKLSMERTEDSAFGPVDRIGQLTMRNLDIADSRAKLEQYAGLGLIGTANPAIGAAQAAATGLIGAMPEGGAQAIASRGEVSADDELLDRAAMESGTD

Annotated regions:
phrase: GSTFKGNDIER
type: CONSERVED_SITE
name: Arginosuc_synth_CS
description: Argininosuccinate synthase, conserved site

phrase: VGIAFSGGLDTSVAVAWMRDKGAVPCTYTADIGQYDEPDIASVPDRAKTYGAEVARLVDCRAALVEEGLAALTCGAFHIRSGGRAYFNTTPLGRAVTGTLLVRAMLEDDVQIWGDGSTFKGNDIERFYRYGLLANPQLRIYKPWLDA
type: DOMAIN
name: Arginosuc_syn_N
description: Arginosuccinate synthase-like, N-terminal domain

phrase: AFSGGLDT
type: CONSERVED_SITE
name: Arginosuc_synth_CS
description: Argininosuccinate synthase, conserved site

phrase: YSTDANIWGATHEAKTLEHLDTGVETVEPIMGVRFWDPSVEIAPEDVTIGFDQGRPVTINGKEFASAVDLVMEANAVGGRHGMGMSDQIENRIIEAKSRGIYEAPGMALLHAAYERLVNAIHNEDTLAQYHTEGRRLGRLMYEGRWLDPQSLMIRESLQRWVGSAVTGEVTLRLRRGEDYSILDTTGPAFSYHPDKLSMERT
type: DOMAIN
name: Arginosuc_syn_C
description: Arginosuccinate synthase C-terminal domain
Protein sequence:
MQLDKGLFVAFEGPDACGKSTVSKLVYQKLINFFNNKDSVILTREPGGTEVGEKIREILVNYDIDPRTEALLFAASRTEHVWNVILKAKANKKIILCDRFIHSSLVYQGIVKNLGYKNVYKVNQFGISKIKPDIVFYFSANPKVLLERKTKDKDRDIFDRLDNQYAQEENLKKIIGGYSSILQFDNRNVIRLDALKPVEELANKICATILERVR

Annotated regions:
phrase: LCDRFIHSSLVY
type: CONSERVED_SITE
name: Thymidylate_kin_CS
description: Thymidylate kinase, conserved site

phrase: FEGPDACGKSTVSKLVYQKLINFFNNKDSVILTREPGGTEVGEKIREILVNYDIDPRTEALLFAASRTEHVWNVILKAKANKKIILCDRFIHSSLVYQGIVKNLGYKNVYKVNQFGISKIKPDIVFYFSANPKVLLERKTKDKDRDIFDRLDNQYAQEENLKKIIGGYSSILQFDNRNVIRLDALKPVEELANK
type: DOMAIN
name: Thymidylate_kin-like_dom
description: Thymidylate kinase-like domain
Protein sequence:
MTIMRKTHPLLKIINHSFIDLPTPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFIHVGRGIYYGSYMLSETWNIGIILLLTTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITAFVLVHLLFLHETGSNNPSGLNSNSDKIPFHPYYTIKDLLGVILLLMVLMILVLFFPDVLGDPDNYTPANPLNTPAHIKPEWYXLFAYAILRSIPNKLGGVLALILSILILAAFPLLNSSKQHGLIYRPISQTLYWIFVSNLLILTWIGGQPVEYPFTVIGQIASILYFAIIIILMPXANMIENNILKLXY

Annotated regions:
phrase: IDLPTPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFIHVGRGIYYGSYMLSETWNIGIILLLTTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITAFVLVHLLFLHET
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: PLLKIINHSFIDLPTPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFIHVGRGIYYGSYMLSETWNIGIILLLTTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITAFVLVHLLFLHETGS
type: DOMAIN
name: Cytochrome_b_N_euk/bac
description: Cytochrome b/b6, N-terminal domain, eukaryotic/bacterial

phrase: NPSGLNSNSDKIPFHPYYTIKDLLGVILLLMVLMILVLFFPDVLGDPDNYTPANPLNTPAHIKPEWYXLFAYAILRSIPNKLGGVLALILSILILAAFPLLNSSKQHGLIYRPISQTLYWIFVSNLLILTWIGGQPVEYPFTVIGQI
type: DOMAIN
name: Cytochrome_b_C_euk/bac
description: Cytochrome b/b6, C-terminal domain, eukaryotic/bacterial

phrase: MTIMRKTHPLLKIINHSFIDLPTPSNISSWWNFGSLLGICLIIQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWLIRYMHANGASMFFICLFIHVGRGIYYGSYMLSETWNIGIILLLTTMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIITAFVLVHLLFLHETGSNNP
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: GLNSNSDKIPFHPYYTIKDLLGVILLLMVLMILVLFFPDVLGDPDNYTPANPLNTPAHIKPEWYXLFAYAILRSIPNKLGGVLALILSILILAAFPLLNSSKQHGLIYRPISQTLYWIFVSNLLILTWIGGQPVEYPFTVIGQIASILYFAIIIILMPXANMIENNILKL
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: PANPLNTPAHIKPEWYXLFAYAILRSIPNKLGGVLALILSILILAAFPLLNSSKQHGLIYRPISQTLYWIFVSNLLILTWIGGQPVEYPFTVIGQIASILY
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal
Protein sequence:
MLHLQPQNLLIQKTLNEAIEALRKGSPLTMDRIVSDFDYTTYHISNTAEDKSILLLSVKTKAWVSVSECQLDGSLTLLKFLADHYSSLGGVTIPSEVEPGYDYTLQITLAELVQESILQLSVLKTIILSFPFELAISKFIELSQQQPAPVEAEITGGEVAANGDNTLFTIKYRDEENIFIKPSNDRVTIIFETIFQDETDKIFGKVFLQEFVDARKRNRQIQSAPQVLYSHEPPLELKRLYQPPKVAEQSRRFITFVLFPRHFQTKELQFHSICQLTLFRNYFHYHIKCSKAYMHSRMRFRVDSFIKVLNRAKVDEDDENDELSAEGRQQARRTFTGRKIVY

Annotated regions:
Protein sequence:
MIALLTGQIAHKSPDHVILDVHGVGYRVMIPFSTYYELPEEGQATLHIHTSVREDAILLYGFRTRTEKSFFQLLISVSGIGPKLARDILSNIQPPQLAAALQQGDLHKLSAIPGIGKKTAERLVLELKDKAGKLDSGSIPAGDAVGRSLPAGSVLDDVSSALVNLGYKDPQVRKVLAELDCAGSASVEEVLKQALKILMK

Annotated regions:
phrase: SVLDDVSSALVNLGYKDPQVRKVLAELDCAGSASVEEVLKQAL
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal

phrase: VLDDVSSALVNLGYKDPQVRKVLAELDCAGSASVEEVLKQALKIL
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal

phrase: MIALLTGQIAHKSPDHVILDVHGVGYRVMIPFSTYYELPEEGQATLHIHTSVREDAILLY
type: DOMAIN
name: DNA_helicase_Holl-junc_RuvA_I
description: DNA helicase, Holliday junction RuvA type, domain I, bacterial

phrase: HKLSAIPGIGKKTAERLVL
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: QLLISVSGIGPKLARDILS
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1
Protein sequence:
MNLLGKMIYVEGFMMIMATLLVSMSYGHRAMINDVAEAPVFDDVVSPNGLDSSWYDARATFYGDIHGGETQQGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVNDPQWCLPGSVKITATNFCPPDYSKTEGVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTGGVKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNWGFGQTFDGKINF

Annotated regions:
phrase: TAALSTALFNEGYTCGACYQIMCVNDPQWCLPGSVKITATNFCPPDYSKTEGVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVK
type: DOMAIN
name: RlpA-like_DPBB
description: RlpA-like protein, double-psi beta-barrel domain

phrase: VKFETKGNPYFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVM
type: DOMAIN
name: Expansin_CBD
description: Expansin, cellulose-binding-like domain

phrase: YFLMILPYNVGGAGDIKLMQVKGDKTGWITMQKNWGQNWTTGVNLTGQGISFRVTTSDGVTKDFNNVMPNNWGFGQTFD
type: DOMAIN
name: Expansin_CBD
description: Expansin, cellulose-binding-like domain

phrase: QGACGYGDLFKQGYGLETAALSTALFNEGYTCGACYQIMCVNDPQWCLPGSVKITATNFCPPDYSKTEGVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVKYRRISCARTG
type: DOMAIN
name: Expansin/allergen_DPBB_dom
description: Expansin/pollen allergen, DPBB domain

phrase: TAALSTALFNEGYTCGACYQIMCVNDPQWCLPGSVKITATNFCPPDYSKTEGVWCNPPQKHFDLSLPMFLKIAQYKAGVVPVK
type: DOMAIN
name: Expansin/allergen_DPBB_dom
description: Expansin/pollen allergen, DPBB domain
Protein sequence:
MQNNKDNYLKFTKMDKKSIRAPYDQNDLSKKIQRIKKREDIFLLYKINNIITEHTLLQPKQRILIAVSGGQDSICLLRILFDLQRKWSWKLGIIHCDHRWNSRSKIQAEHVACLAINLQINYHEGIAIESVQKESIARLWRYNVIQSVAISNNYTAIITGHNASDRIETLLYNLMRGSGLHGLQSIKWKRNLCFSHFTRSVLSKIKFSFLVKKLKFIKTFMDHEDFQGNHFFFLKKRKQLHLIRPFLETTRTEIRNILTIWNFPSWPDVSNKELRIRRNRIRHRVIPYIRIHYNPNIDQTLVRWAEIVQSETFYLEQLTNYILFKIEIKKKISSISLKIPLEQLRKQKEPSEEKLNFYQSAIPVDLLRSLPVAIQRRVLKQYIYINTNRILGFQYIEQIRLSCLFSLQDSLRKFLHRHRCRPIYLSEHISTHSMKSSTSDTCIDWKGPKEKKKLVTPWLIFPGGIKFLIRKNYLFIFSPKNSSLTIKRPRIEQ

Annotated regions:
phrase: RILIAVSGGQDSICLLRILFDLQRKWSWKLGIIHCDHRWNSRSKIQAEHVACLAINLQINYHEGIAIESVQKESIARLWRYNVIQSVAISNNYTAIITGHNASDRIETLLYNLMRGSGLHGLQSIKWKRNLCFSHFTRSVLSKIKFSFLVKKLKFIKTFMDHEDFQGNHFFFLKKRKQLHLIRPFLETTRTEIRNILTIWNFPSWPDVSNKE
type: DOMAIN
name: tRNA_Ile_lys_synt_N
description: tRNA(Ile)-lysidine synthase, N-terminal

phrase: ILIAVSGGQDSICLLRILFDLQRKWSWKLGIIHCDHRWNSRSKIQAEHVACLAINLQINYHEGIAIESVQKESIARLWRYNVIQSVAISNNYTAIITGHNASDRIETLLYNLMRGSGLHGLQSIKWKRNLCFSHFTRSVLSKIKFSFLVKKLKFIKTFMDHEDFQGNHFFFLKKRKQLHLIRPFLETTRTEIRNILTIWNFPSWPDVSNKELRIRRNRIRH
type: DOMAIN
name: TilS/TtcA_N
description: tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal

phrase: RILIAVSGGQDSICLLRILFDLQRKWSWKLGIIHCDHRWNSRSKIQAEHVACLAINLQINYHEGIAIESVQKESIARLWRYNVIQSVAISNNYTAIITGHNASDRIETLLYNLMRGSGLHGLQSIKWKRNL
type: DOMAIN
name: tRNA_Ile_lys_synt_N
description: tRNA(Ile)-lysidine synthase, N-terminal
Protein sequence:
MRVQKPKGTVDILPEQSGSWQKVEETARNFFNRANYREIRTPSFENYEIFSRSSGDSSEIVEKQMYDFNDKGGRHIALRPEGTAGVVRAYVEDKMYAPEVVKPFNVFYMESTFRYERPQAGRQREFHQIGVESFGSSNPLADVQTIMMGHDLLGELGVKNYQLHINTLGNEQVRKGYHDALVNYFTPVKDELSEDSQRRLRDNPLRILDSKDDRDKKFLPDAPKIRDFLDDNSKANFESILKMLDQLGIDYVIDDDLVRGLDYYTGVIFEFMVEDKSLWESATTILGGGRYDHLVEEFNGPETPAVGFGIGEERLMLVLEKQNPELFKNEGIDFFITNIGEGTAQKAIEIARSLRKQGFEADFDVNQKKLKGQFKKADREGAKYVITLGEKELANGVLNIKRLADGKTIDLSLEDINDMNKVMKELKD

Annotated regions:
phrase: GIDFFITNIGEGTAQKAIEIARSLRKQGFEADFDVNQKKLKGQFKKADREGAKYVITLGEKELANGVLNIKRLADGKTIDLSLED
type: DOMAIN
name: HisRS_anticodon
description: Histidyl-anticodon-binding

phrase: WQKVEETARNFFNRANYREIRTPSFENYEIFSRSSGDSSEIVEKQMYDFNDKGGRHIALRPEGTAGVVRAYVEDKMYAPEVVKPFNVFYMESTFRYERPQAGRQREFHQIGVESFGSSNPLADVQTIMMGHDLLGELGVKNYQLHINTLGNEQVRKGYHDALVNYFTPVKDELSEDSQRRLRDNPLRILDSKDDRDKKFLPDAPKIRDFLDDNSKANFESILKMLDQLGIDYVIDDDLVRGLDYYTGVIFEFMVEDKSLWESATTILGGGRYDHLVEEFNGPETPAVGFGIGEERLMLV
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: FITNIGEGTAQKAIEIARSLRKQGFEADFDVNQKKLKGQFKKADREGAKYVITLGEKELANGVLNIKRLADGKTIDLSLEDI
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: WQKVEETARNFFNRANYREIRTPSFENYEIFSRSSGDSSEIVEKQMYDFNDKGGRHIALRPEGTAGVVRAYVEDKMYAPEVVKPFNVFYMESTFRYERPQAGRQREFHQIGVESFGSSNPLADVQTIMMGHDLLGELGVKNYQLHINTLGNEQVRKGYHDALVNYFTPVKDELSEDSQRRLRDNPLRILDSKDDRDKKFLPDAPKIRDFLDDNSKANFESILKMLDQLGIDYVIDDDLVRGLDYYTGVIFEFMVEDKSLWESATTILGGGRYDHLVEEFNGPETPAVGFGIGEERLMLVL
type: DOMAIN
name: HisRS-like_core
description: Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain

phrase: GTVDILPEQSGSWQKVEETARNFFNRANYREIRTPSFENYEIFSRSSGDSSEIVEKQMYDFNDKGGRHIALRPEGTAGVVRAYVEDKMYAPEVVKPFNVFYMESTFRYERPQAGRQREFHQIGVESFGSSNPLADVQTIMMGHDLLGELGVKNYQLHINTLGNEQVRKGYHDALVNYFTPVKDELSEDSQRRLRDNPLRILDSKDDRDKKFLPDAPKIRDFLDDNSKANFESILKMLDQLGIDYVIDDDLVRGLDYYTGVIFEFMVEDKSLWESATTILGGGRYDHLVEEFNGPETPAVGFGI
type: DOMAIN
name: HisRS-like_core
description: Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain
Protein sequence:
MSATDDLVSALRAADAVQFGEFELSHGGTSEYYVDKYLFETDPECLSAIAAAFADRIDEDTTLAGVALGGVPLAAATATEAGVPYVIARKQAKEYGTANRIEGRLDDGEEVVVVEDIATTGQSAVDAVDALRDAGATVNRALIVVDREEGGRELLAEHGVEMAALVTASDLLDAE

Annotated regions:
phrase: PECLSAIAAAFADRIDEDTTLAGVALGGVPLAAATATEAGVPYVIARKQAKEYGTANRIEGRLDDGEEVVVVEDIATTGQSAVDAVDALRDAGATVNRALIVVDREEGG
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: CLSAIAAAFADRIDEDTTLAGVALGGVPLAAATATEAGVPYVIARKQAKEYGTANRIEGRLDDGEEVVVVEDIATTGQSAVDAVDALRDAGATVNRALIVVDREEGGRELLAEHGVEMAALV
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: RAADAVQFGEFELSHGGTSEYYVDKYLFETDPECLSAIAAAFADRIDEDTTLAGVALGGVPLAAATATEAGVPYVIARKQAKEYGTANRIEGRLDDGEEVVVVEDIATTGQSAVDAVDALRDAGATVNRALIVVDREEGGRELLAEHGVEMAALVTASD
type: DOMAIN
name: Or_phspho_trans_dom
description: Orotate phosphoribosyl transferase domain
Protein sequence:
MSIRRVMHVDLDAFFVSVEQAVRPELKDKPVIVGGKPERRGVVAAASYEARKFGIHSGMPLITAKNLCPQAIFIEGNHQLYREYSEKFMLILSDFSPFLEPMGLDEAYLEVTGFESLHGSIAEMASKIRRRITAEMGINASIGIANSKVAAKIATERAKPNGQCEVPAGEEASFLAPLDIAVMPGIGKKTEQHLKSLGIDTLGKLAALPASFLKSRLGAYAPYLSNAAMGIDNRPVEMPSEAKSISRETTFETDTRNQTFLEAKLSYLSEKITATLRKRGKQARVVQIKIRFADFTTLTRQKHLGQPASGNREIFQTALSLMNGILDSDRQTVRLLGVGISDFCGPEKQLEIDPAKARLEKLDASLDKIRQKYGFSSVQTGRTYRLKDMF

Annotated regions:
phrase: VMHVDLDAFFVSVEQAVRPELKDKPVIVGGKPERRGVVAAASYEARKFGIHSGMPLITAKNLCPQAIFIEGNHQLYREYSEKFMLILSDFSPFLEPMGLDEAYLEVTGFESLHGSIAEMASKIRRRITAEMGINASIGIANSKVAAKIATERAKPNGQCEVPAGEEASFLAPLDIAVMPGI
type: DOMAIN
name: UmuC
description: UmuC domain

phrase: VDLDAFFVSVEQAVRPELKDKPVIVGGKPERRGVVAAASYEARKFGIHSGMPLITAKNLCPQAIFIEGNHQLYREYSEKFMLILSDFSPFLEPMGLDEAYLEVTGFESLHGSIAEMASKIRRRITAEMGINASIGIANSKVAAKIAT
type: DOMAIN
name: UmuC
description: UmuC domain

phrase: KSISRETTFETDTRNQTFLEAKLSYLSEKITATLRKRGKQARVVQIKIRFADFTTLTRQKHLGQPASGNREIFQTALSLMNGILDSDRQTVRLLGVGISDFCGPEKQ
type: DOMAIN
name: DNA_pol_Y-fam_little_finger
description: DNA polymerase, Y-family, little finger domain

phrase: EEASFLAPLDIAVMPGIGKKTEQHLKSLG
type: CONSERVED_SITE
name: PolY_HhH_motif
description: DNA polymerase type-Y, HhH motif
Protein sequence:
MKAKETRKNYLHLWKWGTMLLGVLMICSAKESLWVTVYYGVPVWKEANTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQELVLANVTEEFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTNVTTSTTANATSNNVTTSTAANATSNSSAEELEKPGEIKNCSFNITTGIRDKMQKEYALFYKLDVVPIDNSNDSYRLVSCNTSVITQACPKTSFEPIPIHYCAPAGFAILKCNNKTFNGSGPCTNVSTVQCTHGIRPVVSTQLLLNGSLSEEEVMIRSKNFSDNAQNIIVQLNKTVSITCVRPNNNTRKSIHIGPGRAFFATESIIGNIRKAHCTLNRTDWNDTLKHIVKKLQEQFGNKSNQSSGGDPEITMHSFICGGEFFYCDTKELFNSTWTNNGTENKNETENKNGTITLPCRIKQIVNMWQEVGKAMYAPPIRGQIRCESNITGLLLTRDGGTDNDNSTNTTEIFRPVGGDMKDNWRSELYKYKVVKVEPLGIAPTKAKRRVVQREKRALTLGAMFLGFLGAAGSTMGAASITLTVHARQLLTGIVQQQSNLLKAIEAQHHLLQLTVWGIKQLQARVLAVERYLRDQQLLGVWGCSGKLICTTTVPWNTSWSNKTQEQIWGNMTWMQWEKEIDNYTSLIYTLLEESQTQQETNELDLLKLDQWASLWNWFDITQWLWYIKIFIMIVGGLIGLRIIFTVLSIVNRVRQGYSPLSFQTLLPAPRGLDRPEGTEEEGGERDRDRSVRLVTGFFAI

Annotated regions:
phrase: VHARQLLTGIVQQQSNLLKAIEAQHHLLQLTVWGIKQLQARVLAVERYLRDQQLLGVWGCSGKLICTTTVPWNTSWSNKTQEQIWGNMTWMQWEKEIDNYTSLIYTLLEESQTQQETNELDLLKLD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASITLTVHARQLLTGIVQQQSNLLKAIEAQHHLLQLTVWGIKQLQARVLAVERYLRDQQLLGVWGCSGKLICTTTVPWNTSWSNKTQEQIWGNMTWMQWEKEIDNYTSLIYTLLEESQTQQETNELDLLKLDQWASLWNWFDITQWLWYIKIFIMIVGGLIGLRIIFTVLSIVNRVRQGYSPLSFQT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKEANTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQELVLANVTEEFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTNVTTSTTANATSNNVTTSTAANATSNSSAEELEKPGEIKNCSFNITTGIRDKMQKEYALFYKLDVVPIDNSNDSYRLVSCNTSVITQACPKTSFEPIPIHYCAPAGFAILKCNNKTFNGSGPCTNVSTVQCTHGIRPVVSTQLLLNGSLSEEEVMIRSKNFSDNAQNIIVQLNKTVSITCVRPNNNTRKSIHIGPGRAFFATESIIGNIRKAHCTLNRTDWNDTLKHIVKKLQEQFGNKSNQSSGGDPEITMHSFICGGEFFYCDTKELFNSTWTNNGTENKNETENKNGTITLPCRIKQIVNMWQEVGKAMYAPPIRGQIRCESNITGLLLTRDGGTDNDNSTNTTEIFRPVGGDMKDNWRSELYKYKVVKVEPLGIAPTKAKRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120