nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MQETIRNTFKSVRQASRELVMIGEQAINSILIDLAETIPDCSSSILEANRRDLDRMDPADPMFDRLLLNEKRLEIIAADIRNVATLPSPLDIVLEQRRLPNGLELKKITVPIGVIGIIYEARPNVTFDVFALCLKSGNATVLKGGSDAHESNTAIVECIKTVLRRNGINDNTLSLLPSEREAAGIMLNAVDSIDMIIPRGSQKLIDFVRQNAKVPVIETGAGIVHTYIDKNADTGIAAKVIFNAKTRRPSVCNALDTLLVHAAKLDDLPQITAPLQEKKVVIYADEAAYAKLQGSYPESLLERARPEHFGTEFLSLKLSVKTVSSIEEALDHIAEYSSRHSEAIITNDPEAKAEFLKRVDAAVVYANTSTAFTDGAQFGLGAEIGISTQKLHARGPMALKELTSYKWIIEGDGQTRSV

Annotated regions:
phrase: VSSIEEALDHIAEYSSRHSEAI
type: CONSERVED_SITE
name: G-glutamylP_reductase_CS
description: Gamma-glutamyl phosphate reductase GPR, conserved site

phrase: TIRNTFKSVRQASRELVMIGEQAINSILIDLAETIPDCSSSILEANRRDLDRMDPADPMFDRLLLNEKRLEIIAADIRNVATLPSPLDIVLEQRRLPNGLELKKITVPIGVIGIIYEARPNVTFDVFALCLKSGNATVLKGGSDAHESNTAIVECIKTVLRRNGINDNTLSLLPSEREAAGIMLNAVDSIDMIIPRGSQKLIDFVRQNAKVPVIETGAGIVHTYIDKNADTGIAAKVIFNAKTRRPSVCNALDTLLVHAAKLDDLPQITAPLQEKKVVIYADEAAYAKLQGSYPESLLERARPEHFGTEFLSLKLSVKTVSSIEEALDHIAEYSSRHSEAIITNDPEAKAEFLKRVDAAVVYANTSTAFTDGAQFGLGAEIGISTQKLHARGPMALKELTSYKWIIEGDGQT
type: DOMAIN
name: GPR_dom
description: GPR domain

phrase: KSVRQASRELVMIGEQAINSILIDLAETIPDCSSSILEANRRDLDRMDPADPMFDRLLLNEKRLEIIAADIRNVATLPSPLDIVLEQRRLPNGLELKKITVPIGVIGIIYEARPNVTFDVFALCLKSGNATVLKGGSDAHESNTAIVECIKTVLRRNGINDNTLSLLPSEREAAGIMLNAVDSIDMIIPRGSQKLIDFVRQNAKVPVIETGAGIVHTYIDKNADTGIAAKVIFNAKTRRPSVCNALDTLLVHAAKLDDLPQITAPLQEKKVVIYADEAAYAKLQGSYPESLLERARPEHFGTEFLSLKLSVKTVSSIEEALDHIAEYSSRHSEAIITNDPEAKAEFLKRVDAAVVYANTSTAFTDGAQFGLGAEIGISTQKLHARGPMALKELTSYKWIIEG
type: DOMAIN
name: GPR_dom
description: GPR domain

phrase: ITVPIGVIGIIYEARPNVTFDVFALCLKSGNATVLKGGSDAHESNTAIVECIKTVLRRNGINDNTLSLLPSEREAAGIMLNAVDSIDMIIPRGSQKLIDFVRQNAKVPVIETGAGIVHTYIDKNADTGIAAKVIFNAKTRRPSVCNALDTLLVHAAKLDD
type: DOMAIN
name: Aldehyde_DH_dom
description: Aldehyde dehydrogenase domain

phrase: RQASRELVMIGEQAINSILIDLAETIPDCSSSILEANRRDLDRMDPADPMFDRLLLNEKRLEIIAADIRNVATLPSPLDIVLEQRRLPNGLELKKITVPIGVIGIIYEARPNVTFDVFALCLKSGNATVLKGGSDAHESNTAIVECIKTVLRRNGINDNTLSLLPSEREAAGIMLNAVDSIDMIIPRGSQKLIDFVRQNAKVPVIETGAGIVHTYIDKNADTGIAAKVIFNAKTRRPSVCNALDTLLVHAAKLDDLPQITAPLQEKKVVIYADEAAYAKLQGSYPESLLERARPEHFGTEFLSLKLSVKTVSSIEEALDHIAEYSSRHSEAIITNDPEAKAEFLKRVDAAVVYANTSTAFTDGAQFGLGAEIGISTQKLHARGPMALKELTSY
type: DOMAIN
name: GPR_dom
description: GPR domain
Protein sequence:
MPTERSALAIVLAAGEGTRMKSDRPKALHEVAGRSMLGNVLSSAMSAGVGSVAVIVGPGRDDVGAEARRFIPEAEIFVQSERRGTAHAVLAARHAIAKGADDLLVLFADTPLLTAPTIGALRAALAEGAAVAVLGFQASNPFGYGRLLRDAAGRLVAIREEKDASDEERAVTLCNGGLMAIDGVEALRLLEKIDNKNAKGEFYLTDAVELARADGLETRVVIADEAEVLGVNDRMQLAQAEAIAQTRLRRAAMAGGATMIAPETVFLAADAVIGRDVVIEPHVVIGPGVEIADGAVIHAFSHLEGARVGERASVGPFARLRPGAEIAEKAKVGNFVEIKNANVARGAKVNHLSYIGDADIGANANIGAGTITCNYDGFLKYRTTIGENAFIGSNSSLVAPVTIGQGAYVGSGSVITKDVAPDALAVARGRQMEKAGWAVSFRKVQAAKKAHRK

Annotated regions:
phrase: AIVLAAGEGTRMKSDRPKALHEVAGRSMLGNVLSSAMSAGVGSVAVIVGPGRDDVGAEARRFIPEAEIFVQSERRGTAHAVLAARHAIAKGADDLLVLFADTPLLTAPTIGALRAALAEGAAVAVLGFQASNPFGYGRLLRDAAGRLV
type: DOMAIN
name: MobA-like_NTP_Trfase
description: MobA-like NTP transferase

phrase: IGSNSSLVAPVTIGQGAYVGSGSVITKD
type: CONSERVED_SITE
name: Hexapep_transf_CS
description: Hexapeptide transferase, conserved site

phrase: DAVIGRDVVIEPHVVIGPGVEIADGAVIHAFSHL
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: TTIGENAFIGSNSSLVAPVTIGQGAYVGSGSVIT
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: LAQAEAIAQTRLRRAAMAGGATMIAPETVFLAADAVIGRDVVIEPHVVIGPGVEIADGAVIHAFSHLEGARVGERASVGPFARLRPGAEIAEKAKVGNFVEIKNANVARGAKVNHLSYIGDADIGANANIGAGTITCNYDGFLKYRTTIGENAFIGSNSSLVAPVTIGQGAYVGSGSVITKDVAPDALAVARGR
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain
Protein sequence:
MNFRPEQQYILEKPGILLSFEQLRINFKHILRHLEHESHVINSTLTTLISQENASMDEKIEKIDSLLSRVSTVKKKMKHLHDCEALFIKQTKSRLLFMNRLQGIRDMESADFLDWSRVRLNRLVADYMMANGYHGAAALLCKDSQLENLVDLGIYKRYQLIHDSILQQELKEVLSWCSEHRAILKKNNSTLELEVRLQRFIELIKSKKLCQAIAFAKAHFGTWANEHPARLQLAAALLAFPEFTNGSPYSLLLSDDRWEYLASLFTSNFTAVHNIPSVPLLHALLAAGLSSLKTPLCYLDANDDNPLALQSQTVKQCPVCTPCLNDLGKALPYAHITQSAIVDSLTGEGLDSDNCPVAFPNGRVYGIQSLISWNEANGTREGFLRDPYSGKEFPFQLLRKVYVV

Annotated regions:
phrase: CPVCTPCLNDLGKALPYAHITQSAIVDSLTGEGLDSDNCPVAFPNGRVYGIQSLISWNEANGTREGFLRDPY
type: DOMAIN
name: ZF_RING_GID
description: Gid-type RING finger domain

phrase: KKLCQAIAFAKAHFGTWANEHPARLQLAAALLAFPEFTNGSPYSLLLSDDRWEYLASLFTSNFTAVHNIPSVPLLHALLAAGLSSLKTPLCYLD
type: DOMAIN
name: CRA_dom
description: CRA domain

phrase: SRVRLNRLVADYMMANGYHGAAALLCKDSQLE
type: CONSERVED_SITE
name: LisH
description: LIS1 homology motif

phrase: YKRYQLIHDSILQQELKEVLSWCSEHRAILKKNNSTLELEVRLQRFIELIKSKKLCQAIAFAKAHFGTWANEHPARLQLAAALLAFPEFTNGSPYSLLLSDDRWEYLASLFTSNFTAVHNIPSVPLLHALLAAGLSSLKT
type: DOMAIN
name: CTLH/CRA
description: CTLH/CRA C-terminal to LisH motif domain

phrase: SRVRLNRLVADYMMANGYHGAAALLCKDSQLE
type: CONSERVED_SITE
name: LisH
description: LIS1 homology motif

phrase: RLNRLVADYMMANGYHGAAALLCKD
type: CONSERVED_SITE
name: LisH
description: LIS1 homology motif

phrase: IYKRYQLIHDSILQQELKEVLSWCSEHRAILKKNNSTLELEVRLQRFIELIKSKKLC
type: DOMAIN
name: CTLH_C
description: CTLH, C-terminal LisH motif

phrase: IYKRYQLIHDSILQQELKEVLSWCSEHRAILKKNNSTLELEVRLQRFIELIKSKKLC
type: DOMAIN
name: CTLH_C
description: CTLH, C-terminal LisH motif
Protein sequence:
MQIKRSIEKIPGGMMLVPLFLGALCHTFSPEAGKYFGSFTNGMITGTVPILAVWFFCMGASIKLSATGTVLRKSGTLVVTKIAVAWVVAAIASRIIPEHGVEVGFFAGLSTLALVAAMDMTNGGLYASIMQQYGTKEEAGAFVLMSLESGPLMTMIILGTAGIASFEPHVFVGAVLPFLVGFALGNLDPELREFFSKAVQTLIPFFAFALGNTIDLTVIAQTGLLGILLGVAVIIVTGIPLIIADKLIGGGDGTAGIAASSSAGAAVATPVLIAEMVPAFKPMAPAATSLVATAVIVTSILVPILTSIWSRKVKARAAKIEILGTVK

Annotated regions:
Protein sequence:
MEPNTMASFDDEHRHSSFSAKICKVCGDEVKDDDNGQTFVACHVCVYPVCKPCYEYERSNGNKCCPQCNTLYKRHKGSPKIAGDEENNGPDDSDDELNIKYRQDGSSIHQNFAYGSENGDYNSKQQWRPNGRAFSSTGSVLGKDFEAERDGYTDAEWKERVDKWKARQEKRGLVTKGEQTNEDKEDDEEEYLDAEARQPLWRKVPISSSKISPYRIVIVLRLVILVFFFRFRILTPAKDAYPLWLISVICEIWFALSWILDQFPKWFPINRETYLDRLSMRFERDGEKNKLAPVDVFVSTVDPLKEPPIITANTILSILAVDYPVNKVSCYVSDDGASMLLFDTLSETSEFARRWVPFCKKYNVEPRAPEFYFSEKIDYLKDKVQTTFVKDRRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGKEGAFDIDGNELPRLVYVSREKRPGYAHHKKAGAMNAMVRVSAVLTNAPFMLNLDCDHYINNSKAIRESMCFLMDPQLGKKLCYVQFPQRFDGIDLNDRYANRNIVFFDINMRGLDGIQGPVYVGTGCVFNRPALYGYEPPVSEKRKKMTCDCWPSWICCCCGGGNRNHKSDSSKKKSGIKSLFSKLKKKTKKKSDDKTMSSYSRKRSSTEAIFDLEDIEEGLEGYDELEKSSLMSQKNFEKRFGMSPVFIASTLMENGGLPEATNTSSLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFRMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFFSRHCPLWYAWGGKLKILERLAYINTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTINNFASIWFLALFLSIIATAILELRWSGVSINDLWRNEQFWVIGGVSAHLFAVFQGLLKVLFGVDTNFTVTSKGASDEADEFGDLYLFKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLVWVRIDPFLPKQTGPLLKQCGVDC

Annotated regions:
phrase: SFSAKICKVCGDEVKDDDNGQTFVACHVCVYPVCKPCYEYERSNGNKCCPQCNTLYKRHKGSPKIAGDEEN
type: DOMAIN
name: CES_Znf_RING
description: Cellulose synthase, RING-type zinc finger
Protein sequence:
MSGFLEELLGDKLVTGGGEEVDVHSLGARGIALLGLYFGCSLSAPCAQLSASLAAFYGRLRGDAAAGPGAGAGAGAAAEPEPRHRLEIVFVSSDQDQRQWQDFVRDMPWLALPYKEKHRKLKLWNKYRVSNIPSLIFLDATTGKVVCRNGLLVIRDDPEGLEFPWGPKPFREVIAGPLLRNNGQSLESSSLEGSHVGVYFSAHWCPPCRSLTRVLVESYRKIKEAGQEFEIIFVSADRSEESFKQYFSEMPWLAVPYTDEARRSRLNRLYGIQGIPTLIVLDPQGEVITRQGRVEVLNDEDCREFPWHPKPVLELSDSNAVQLNEGPCLVLFVDSEDDGESEAAKQLIQPIAEKIIAKYKAKEEEAPLLFFVAGEDDMTDSLRDYTNLPEAAPLLTILDMSARAKYVMDVEEITPAIVETFVNDFLAEKLKPEPI

Annotated regions:
phrase: HVGVYFSAHWCPPCRSLTRVLVESYRKIKEAGQEFEIIFVSADRSEESFKQYFSEMPWLAVPYTDEARRSRLNRLYGIQGIPTLIVLDPQGE
type: DOMAIN
name: Thioredoxin-like_fold
description: Thioredoxin-like fold

phrase: LLGLYFGCSLSAPCAQLSASLAAFYGRLRGDAAAGPGAGAGAGAAAEPEPRHRLEIVFVSSDQDQRQWQDFVRDMPWLALPYKEKHRKLKLWNKYRVSNIPSLIFLDATTGK
type: DOMAIN
name: Thioredoxin-like_fold
description: Thioredoxin-like fold

phrase: GPLLRNNGQSLESSSLEGSHVGVYFSAHWCPPCRSLTRVLVESYRKIKEAGQEFEIIFVSADRSEESFKQYFSEMPWLAVPYTDEARRSRLNRLYGIQGIPTLIVLDPQGEVITRQGRVEVLNDEDCREFP
type: DOMAIN
name: TryX_NRX_thioredoxin_dom
description: TryX and NRX, thioredoxin domain

phrase: VLELSDSNAVQLNEGPCLVLFVDSEDDGESEAAKQLIQPIAEKIIAKYKAKEEEAPLLFFVAGEDDMTDSLRDYTNLPEAAPLLTILDMSARAKYVMDVEEITPAIVETFVNDFL
type: DOMAIN
name: NRX_PDI_b'
description: Nucleoredoxin, redox inactive TRX-like domain b'

phrase: PKPFREVIAGPLLRNNGQSLESSSLEGSHVGVYFSAHWCPPCRSLTRVLVESYRKIKEAGQEFEIIFVSADRSEESFKQYFSEMPWLAVPYTDEARRSRLNRLYGIQGIPTLIVLDPQGEVITRQGRVEVLNDEDCREFPWHPKPVL
type: DOMAIN
name: Thioredoxin_domain
description: Thioredoxin domain
Protein sequence:
MESRPSGRQHASEGDGDQSPTQCAGMRSSGRSDQPYVLKGNPLLLRVRCYSGCASGSGRQLQLSVFQDLNQFSHCRVWRSPALIVKGEPPWCSQQDTQSPFQTGTPLERPCFRMKLSGWELTKNAQRALGSKLQHILSLDSTQACGAGGPTILRPPRAP

Annotated regions:
Protein sequence:
MDQLGYVRSTTSAQGAKEGVSKPTAPQKNAYARLVQKHHSGRFRSYLNHIAQKMQLEESTSNDPSSDLDLPLRRGLGKDNPARNGLNVHSYSPVRTSHLEQPMPGGFENDKPQTALNRCPHKKHAIVSPEGDLEVEEDYYVHQRGAAADLLNMNDALGGRVSNSLRHRAALQKSSGSDEKDEEEMWRKKHKKRGRCPANTDTAAGHVLTEQFSEDVLVVNARKYSHLSPGQVQGAEKRGLSRTRNNSESARTPQNFDRKRQLSESQTETMNNSDSRTNPRQLGTPRGGPYAAVATPGDRKNRNKPTRGRKKSIFEAYMSKEDVSAGLKRGELIQGPLRINPKKYHEAFIPSPDGTRDIFIDGVVARNRALNGDIVAVKLLPKEQWKVIKPDGSDKETEATHESDVPEDMLGTCAPREMAKGDAESPDVIIEAQFDDNDVEHGQDHLQDTLADDIKKLSLDTGEKVKAVGISGVHRAKQDDGSKVNDPRLLPDKFLQRTAKVVYILEKKHSRAATGFIKLLADKNSELFRRCAMFSPVDHRVPRAYVSLADCPPDFVTRPEDYSNILFICRIMDWKEDSNFATGMLAHHSIKERMVFAQRSFQSRRNTHRQLSKSLGQAGEIEPETEGILTEYGVDFSDFSPEALECLPQSLPWVISPGELAKRRDLRKECIFTIDPSTAKDLDDALSCKQLPDGNFEVGVHIADVSYFVLEETALDKVASERATSVYLVQKMPAINIWLLLQQIYKNEQTDAPCEGDSGDLEVIPMLP

Annotated regions:
phrase: AMFSPVDHRVPRAYVSLADCPPDFVTRPEDYSNILFICRIMDWKEDSNFATGM
type: DOMAIN
name: Dis3_CSD2
description: Dis3-like cold-shock domain 2

phrase: FEAYMSKEDVSAGLKRGELIQGPLRINPKKYHEAFIPSPDGTRDIFIDGVVARNRALNGDIVAVKLLPKEQWK
type: DOMAIN
name: Rrp44_CSD1
description: Rrp44-like cold shock domain

phrase: RRDLRKECIFTIDPSTAKDLDDALSCKQLPDGNFEVGVHIADVSYFVLEETALDKVASERATSVYLVQ
type: DOMAIN
name: RNase_II/R
description: Ribonuclease II/R
Protein sequence:
MQNEKGKNWDESRHDAVIIPKMRSKLQKPKLYRVFLFNDDYTPMDFVVFVLKNFFKKSFEEATHIMLNVHQNGVGECGIYSYEVAEMKVIQVRECAHQNEHPLQCVMEWK

Annotated regions:
phrase: QKPKLYRVFLFNDDYTPMDFVVFVLKNFFKKSFEEATHIMLNVHQNGVGECGIYSYEVAEMKVIQVRECAHQNEHPLQ
type: DOMAIN
name: ClpS_core
description: Adaptor protein ClpS, core
Protein sequence:
MFTLRELPFAKDSMGDFLSPVAFDFHHGKHHQTYVNNLNNLIKGTDFEKSSLFDILTKSSGGVFNNAAQIYNHDFYWDCLSPKATALSDELKGALEKDFGSLEKFKEDFIKSATTLFGSGWNWAAYNLDTQKIEIIQTSNAQTPVTDKKVPLLVVDVWEHAYYIDHKNARPVYLEKFYGHINWHFVSQCYEWAKKEGLGSVDYYINELVHKKA

Annotated regions:
phrase: DVWEHAY
type: BINDING_SITE
name: Mn/Fe_SOD_BS
description: Manganese/iron superoxide dismutase, binding site

phrase: DELKGALEKDFGSLEKFKEDFIKSATTLFGSGWNWAAYNLDTQKIEIIQTSNAQTPVTDKKVPLLVVDVWEHAYYIDHKNARPVYLEKFYGHINWHFVS
type: DOMAIN
name: Mn/Fe_SOD_C
description: Manganese/iron superoxide dismutase, C-terminal

phrase: FTLRELPFAKDSMGDFLSPVAFDFHHGKHHQTYVNNLNNLIKGTDFEKSSLFDILTKSSGGVFNNAAQIYNHDFYWDCL
type: DOMAIN
name: Mn/Fe_SOD_N
description: Manganese/iron superoxide dismutase, N-terminal
Protein sequence:
MFAFLTSKKVGILPSRWGSSRFPGKPLAKILGKTLVQRSYENALSSQSLDCVVVATDDQRIFDHVVEFGGLCVMTSTSCANGTERVEEVVSRHFPQAEIVVNIQGDEPCLSPTVIDGLVSTLENNPAADMVTSVTETTDPEAILTDHKVKCVFDKNGKALYFSRSAIPHNFKHPTPIYLHIGVYAFRKAFLSEYVKIPPSSLSLAEDLEQLRVLEIGRSIYVHVVQNATGPSVDYPEDITKVEQYLLCLSKASF

Annotated regions:
Protein sequence:
MQLLDGKKTSNDIKNEIAAEVQSIKAAGGKVPHLAAVLVGNNGASLTYVGSKVKSCQEIGFDSTLVSLPETITEDELLAKIKELNEDDNLDGYIVQLPLPKHIDEQKILLAIDPDKDVDGFHPTNFGRMALEMESFIPATPFGIMELLERYKVETAGKHTVVIGRSHIVGRPMSILMSRKGNPGDSTVTLTHSRTKDLAEFTKNADIIITALGVPEFLKADMVKEGVTVIDVGITRVEDASNAKGYVIKGDVDFEGVSKKASFITPVPGGVGPMTIAMLLKNTLLARKMRSAKNK

Annotated regions:
phrase: PDKDVDGFHPTNFGRMALEMESFIPATPFGIMELLERYKVETAGKHTVVIGRSHIVGRPMSILMSRKGNPGDSTVTLTHSRTKDLAEFTKNADIIITALGVPEFLKADMVKEGVTVIDVGITRVEDASNAKGYVIKGDVDFEGVSKKASFITPVPGGVGPMTIAMLLKNTLLAR
type: DOMAIN
name: THF_DH/CycHdrlase_NAD-bd_dom
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain

phrase: LDGKKTSNDIKNEIAAEVQSIKAAGGKVPHLAAVLVGNNGASLTYVGSKVKSCQEIGFDSTLVSLPETITEDELLAKIKELNEDDNLDGYIVQLPLPKHIDEQKILLAIDPDKDV
type: DOMAIN
name: THF_DH/CycHdrlase_cat_dom
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain

phrase: PGGVGPMT
type: CONSERVED_SITE
name: THF_DH/CycHdrlase_CS
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site

phrase: HPTNFGRMALEMESFIPATPFGIMELLERYKVETAGKHTVVIGRSHIVGRPMSILMSRKGNPGDSTVTLTHSRTKDLAEFTKNADIIITALGVPEFLKADMVKEGVTVIDVGITRVEDASNAKGYVIKGDVDFEGVSKKASFITPVPGGVGPMTIAMLLKNTLLAR
type: DOMAIN
name: THF_DH/CycHdrlase_NAD-bd_dom
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Protein sequence:
MPQYQTWEEFSRAAEKLYLADPMKARVVLKYRHSDGNLCVKVTDDLVCLVYKTDQAQDVKKIEKFHSQLMRLMVAKEARNVTMETE

Annotated regions:
phrase: QTWEEFSRAAEKLYLADPMKARVVLKYRHSDGNLCVKVTDDLVCLVYKTDQAQDVKKIEKFHSQLMRL
type: DOMAIN
name: SRP9_dom
description: SRP9 domain
Protein sequence:
MARIKDKYRNEVAPAMMEKFGYKSVMQIPRLEKIIINMGLGQAKENQKELEIAVKELGIIAGQKPITTKAKKSVANFKVREGMAVGAKTTLRGEKMYEFADRLINIALPRVRDFRGVNPNSFDGRGNYALGVKEQLIFPEIEYDKVDKVRGMDIILVTTANSDEESRELLRLLGMPFTK

Annotated regions:
phrase: SVMQIPRLEKIIINMGLGQAKENQKELEIAVKELGIIAGQKPITTKAKKSVANFKV
type: DOMAIN
name: Ribosomal_uL5_N
description: Large ribosomal subunit protein uL5, N-terminal

phrase: LGIIAGQKPITTKAKK
type: CONSERVED_SITE
name: Ribosomal_uL5_CS
description: Large ribosomal subunit protein uL5, conserved site

phrase: VGAKTTLRGEKMYEFADRLINIALPRVRDFRGVNPNSFDGRGNYALGVKEQLIFPEIEYDKVDKVRGMDIILVTTANSDEESRELLRLLGMP
type: DOMAIN
name: Ribosomal_uL5_C
description: Large ribosomal subunit protein uL5, C-terminal
Protein sequence:
MSSDGIKEIDSDLIETNYDNVVYKFDDLNLKPNIVRGIFGYGYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQRIDENEKSTQALILAPTRELALQIKNVITSIGLYLNVTVHASIGGTSMQDDIEAFRSGVQVVVGTPGRVFDMIERRYFKTEKVKMFIMDEADEMLSSGFKEQIYNIFRLLPETTQVVLLSATMPQDVLEVTTKFMNNPVRILVKKDELTLEGIKQFYINVELEDYKFDCLCDLYDSISVTQAVIFCNTRSKVEFLTTKLKAENFTVSAIHADLPQAERDTIMKEFRSGSSRILIATDLLARGIDVQQVSLVINYDLPSNKENYIHRIGRGGRFGRKGVAINFVTERDVGMMREIEQFYSTQIEEMPADIGALFN

Annotated regions:
phrase: EFLTTKLKAENFTVSAIHADLPQAERDTIMKEFRSGSSRILIATDLLARGIDVQQVSLVINYDLPSNKENYIHRIGRGGRF
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: IMDEADEM
type: CONSERVED_SITE
name: RNA-helicase_DEAD-box_CS
description: ATP-dependent RNA helicase DEAD-box, conserved site

phrase: AIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQRIDENEKSTQALILAPTRELALQIKNVITSIGLYLNVTVHASIGGTSMQDDIEAFRSGVQVVVGTPGRVFDMIERRYFKTEKVKMFIMDEADEMLSSGFKEQIYNIFRLLPETTQVVLLSATMPQDVL
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: YKFDDLNLKPNIVRGIFGYGYETPSAIQ
type: DOMAIN
name: RNA_helicase_DEAD_Q_motif
description: RNA helicase, DEAD-box type, Q motif

phrase: GIKQFYINVELEDYKFDCLCDLYDSISVTQAVIFCNTRSKVEFLTTKLKAENFTVSAIHADLPQAERDTIMKEFRSGSSRILIATDLLARGIDVQQVSLVINYDLPSNKENYIHRIGRGGRFGRKGVAINFVTERDVGMMREIEQFYSTQIEEMPADIGAL
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: ILPITEGRDVLAQAQSGTGKTATFTISALQRIDENEKSTQALILAPTRELALQIKNVITSIGLYLNVTVHASIGGTSMQDDIEAFRSGVQVVVGTPGRVFDMIERRYFKTEKVKMFIMDEADEMLSSGFKEQIYNIFRLLPETTQVVLLSATMPQDVLEVTTKFMNNPVR
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: KFDCLCDLYDSISVTQAVIFCNTRSKVEFLTTKLKAENFTVSAIHADLPQAERDTIMKEFRSGSSRILIATDLLARGIDVQQVSLVINYDLPSNKENYIHRIGRGGRF
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: GYETPSAIQQRAILPITEGRDVLAQAQSGTGKTATFTISALQRIDENEKSTQALILAPTRELALQIKNVITSIGLYLNVTVHASIGGTSMQDDIEAFRSGVQVVVGTPGRVFDMIERRYFKTEKVKMFIMDEADEMLSSGFKEQIYNIFRLLPETTQVVLLSATMPQDVLEVTTKFMNNPVRILVKKDELTLEGIKQ
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain
Protein sequence:
MLLPKRTKYRRPHRIKYEGKAKGNTKVDFGEFGLKSLDGAWITNRQIEAARIAMTRYMKRWGKVWIRIFPHMAKTKKPLEVRMGSGKGSPEEWVAVVKTGTVMFEVAGVSEETAREALRLAMHKLPVRCKIVKKGEE

Annotated regions:
phrase: RMGSGKGSPEE
type: CONSERVED_SITE
name: Ribosomal_uL16_CS
description: Large ribosomal subunit protein uL16, conserved site

phrase: KRWGKVWIRIF
type: CONSERVED_SITE
name: Ribosomal_uL16_CS
description: Large ribosomal subunit protein uL16, conserved site

phrase: NTKVDFGEFGLKSLDGAWITNRQIEAARIAMTRYMKRWGKVWIRIFPHMAKTKKPLEVRMGSGKGSPEEWVAVVKTGTVMFEVAGVSEETAREALRLAMHKLPVRCKI
type: DOMAIN
name: Ribosomal_uL16_dom
description: Large ribosomal subunit protein uL16 domain
Protein sequence:
MIKFGEAVLGNEIKAIVNVALGKGELIENTFTNALTRGNCVFANLRPNLIVKPLTLVVPRHNIESEIQDELFQGVIQYAVAKAVADLDLDEDLKVVVSVNVPEVPITNLNKRKLFQYFYASAKLAINRALNEYPSKEKVKKEKYRALHPLVGFRDVRLEYPPYLQIALDVPTMENLEFLLQTIPNSDHIILEAGTPLIKKFGLEVIEIMREYFDGFIVADLKTLDTGRVEVRLAFEATANAVAISGVAPKSTIIKAIHECQKCGLISYLDMMNVSEPQKLYDSLKLKPDVVILHRGIDEETFGIKKEWKFKENCLLAIAGGVGVENVEELLKEYQILIVGRAITKSKDPGRVIRMFINKMGYDIDTYRLYFDEDEDIGEEL

Annotated regions:
phrase: PYLQIALDVPTMENLEFLLQTIPNSDHIILEAGTPLIKKFGLEVIEIMREYFDGFIVADLKTLDTGRVEVRLAFEATANAVAISGVAPKSTIIKAIHECQKCGLISYLDMMNVSEPQKLYDSLKLKPDVVILHRGIDEETFGIKKEWKFKENCLLAIAGGVGVENVEELLKEYQILIVGRAITKSKDPGRVIRM
type: DOMAIN
name: HPS/KGPDC
description: HPS/KGPDC domain

phrase: YLQIALDVPTMENLEFLLQTIPNSDHIILEAGTPLIKKFGLEVIEIMREYFDGFIVADLKTLDTGRVEVRLAFEATANAVAISGVAPKSTIIKAIHECQKCGLISYLDMMNVSEPQKLYDSLKLKPDVVILHRGIDEETFGIKKEWKFKENCLLAIAGGVGVENVEELLKEYQILIVGRAITKSKDPGRVIRM
type: DOMAIN
name: OMPdeCOase_dom
description: Orotidine 5'-phosphate decarboxylase domain

phrase: PYLQIALDVPTMENLEFLLQTIPNSDHIILEAGTPLIKKFGLEVIEIMREYFDGFIVADLKTLDTGRVEVRLAFEATANAVAISGVAPKSTIIKAIHECQKCGLISYLDMMNVSEPQKLYDSLKLKPDVVILHRGIDEETFGIKKEWKFKENCLLAIAGGVGVENVEELLKEYQILIVGRAITKSKDPGRVIR
type: DOMAIN
name: OMPdeCOase_dom
description: Orotidine 5'-phosphate decarboxylase domain

phrase: GEAVLGNEIKAIVNVALGKGELIENTFTNALTRGNCVFANLRPNLIVKPLTLVVPRHNIESEIQDELFQGVIQYAVAKAVADLDLDEDLKVVVSVNVPEVPITNLNKRKLFQYFYASAKLAINRALNEYPSKEKVKKEKYRALHP
type: DOMAIN
name: HCHO-activating_enzyme
description: Formaldehyde-activating enzyme
Protein sequence:
MDLENLAEETRIVLADLIKRSDIKKGQIFVLGLSSSEVAGGVIGKNSNLDIGEVIVKTILTYLNDRGIYLAVQGCEHLNRALVVERELADKRNLEIVNVLPNLHAGGSGQLAAFKYMKDPVEVEEIVADAGLDIGDTAIGMHVKRVQVPLRPLLRELEGAHLTALASRPKLIGGSRASYQPDPIRKF

Annotated regions:
Protein sequence:
MFTRKSVILMAVLLIWSAVSYAERVKDLANVAGVRPNQLIGYGLVVGLSGTGDKTSYADQSLMSMLNKFGINLPPGTKTNSKNVAAVAVHADLPAFSKSGQRIDVTVSSLGNAKSLRGGTLLLTPLKGVDGNVYALAQGNLIVGGLDASGADGSRITVNVPSVGRVPGGGIVEKTVNTGFDLGNTITLNLKNSDFTTATNLVNAINAKLGKGTAYATDAESVEVMAPRIPNQRVAFLSVIENIEVTPGVDSAKVIINSRTGTVVIGSNVKVSAAAVTHGNLVVKVSESKDVSQPNPFAGGNTQVTPKTELSVESEGKGRMFKFPKGVTLDDIVQAVNKVGAAPGDLVAILEALKQSGALSADLMVI

Annotated regions:
Protein sequence:
MSSVLSDYTIGGVKIHFPCRAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSALAWQQSLSEKPVDEGLNKKPEAPPSCSCACHSKNFTYSDTNLDTSPHFNSPSKPSSGRNGVSTPCQDSPEKNTLAAKLSAKKQASIHRDEDDDFQVEKKRIRPLETTQQIRKRHCLEKDVHHVDARLASEKRVKPESPIGKSFSDRKDSFQNVDGLCSRCCCSAKQGNNQEPANTVKKDHGGQCKRPKIYFGTRTHKQIAQITRELRKTAYSGVPMTILSSRDHSCVHPEVVGNFNRKEKCMELLDGKHGKSCYFYHGVHKISNQQTLQHLQGMSRAWDIEELVSLGRKLKACPYYTARELIEDADIVFCPYNYLLDSQIRETMDIKLKGQVVILDEAHNIEDCARESASYSVTEVQLRFARDELDSLINGNIRKKSHEPLRDVCYNLINWLETNSKHLVERGYESSCKIWSGNEMLLNLYRMGITTATFPVLQRHLSAVLQKEEKVTPIHGKEEAIQIPIISASTQVVLKGLFMVLDYLFRENSRFADDYKVAIQQTYSWTNQIAIFDKTGVLAVPKNKKHSRQKIGVNALNFWCLNPAVAFSDINDKVRTIVLTSGTLSPLKSFSSELGVTFSIQLEANHVISNSQVWVGTVGSGPKGRNLCATFQHTETFEFQDEVGMLLLSVCQTVSQGILCFLPSYKLLEKLRERWIFTGLWHSLESVKTVIAEPQGGEKTDFDELLQVYYDAIKFKGEKDGALLIAVCRGKV

Annotated regions:
phrase: FGTRTHKQIAQITRELRKTAYSGVPMTILSSRDHSCVHPEVVGNFNRKEKCMELLDGKHGKSCYFYHGVHKISNQQTLQHLQGMSRAWDIEELVSLGRKLKACPYYTARELIEDADIVFCPYNYLLDSQIRETMDIKLKGQVVILDEAHNIEDCARESASYSVTEVQ
type: DOMAIN
name: RAD3-like_helicase_DEAD
description: RAD3-like helicase, DEAD

phrase: FPCRAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSALAWQQSLSEKPVDEGLNKKPEAPPSCSCACHSKNFTYSDTNLDTSPHFNSPSKPSSGRNGVSTPCQDSPEKNTLAAKLSAKKQASIHRDEDDDFQVEKKRIRPLETTQQIRKRHCLEKDVHHVDARLASEKRVKPESPIGKSFSDRKDSFQNVDGLCSRCCCSAKQGNNQEPANTVKKDHGGQCKRPKIYFGTRTHKQIAQITRELRKTAYSGVPMTILSSRDHSCVHPEVVGNFNRKEKCMELLDGKHGKSCYFYHGVHKISNQQTLQHLQGMSRAWDIEELVSLGRKLKACPYYTARELIEDADIVFCPYNYLLDSQIRETMDIKLKGQVVILDEAHNIEDCARESASYSVTEVQLRFARDELDSLINGNIRKKSHEPLRDVCYNLINWLETNSKHLVERGYESSCKIWSGNEMLLNLYRMGITTATFPVLQRHLSAVLQKEEKVTPIHGKEEAIQI
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: GGVKIHFPCRAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSALAWQQSLSEKPVDEGLNKKPEAPPSCSCACHSKNFTYSDTNLDTSPHFNSPSKPSSGRNGVSTPCQDSPEKNTLAAKLSAKKQASIHRDEDDDFQVEKKRIRPLETTQQIRKRHCLEKDVHHVDARLASEKRVKPESPIGKSFSDRKDSFQNVDGLCSRCCCSAKQGNNQEPANTVKKDHGGQCKRPKIYFGTRTHKQIAQITRELRKTAYSGVPMTILSSRDHSCVHPEVVGNFNRKEKCMELLDGKHGKSCYFYHGVHKISNQQTLQHLQGMSRAWDIEELVSLGRKLKACPYYTARELIEDADIVFCPYNYLLDSQIRETMDIKLKGQVVILDEAHNIEDCARESASYSVTEVQLRFARDELDSLINGNIRKKSHEPLRDV
type: DOMAIN
name: Helic_SF1/SF2_ATP-bd_DinG/Rad3
description: Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type

phrase: VKIHFPCRAYPAQLAMMNSIVRGLNSSQHCLLESPTGSGKSLALLCSALAWQQSLSEKPVDEGLNKKPEAPPSCSCACHSKNFTYSDTNLDTSPHFNSPSKPSSGRNGVSTPCQDSPEKNTLAAKLSAKKQASIHRDEDDDFQVEKKRIRPLETTQQIRKRHCLEKDVHHVDARLASEKRVKPESPIGKSFSDRKDSFQNVDGLCSRCCCSAKQGNNQEPANTVKKDHGGQCKRPKIYFGTRTHKQIAQITRELRKTAYSGVPMTILSSRDHSCVHPEVVGNFNRKEKCMELLDGKHGKSCYFYHGVHKISNQQTLQHLQGMSRAWDIEELVSLGRKLKACPYYTARELIEDADIVFCPYNYLLDSQIRETMDIKLKGQVVILDEAHNIEDCARESASYSVTEVQLRFARDELDSLINGNIRKKSH
type: DOMAIN
name: Helicase-like_DEXD_c2
description: Helicase-like, DEXD box c2 type

phrase: LSVCQTVSQGILCFLPSYKLLEKLRERWIFTGLWHSLESVKTVIAEPQGGEKTDFDELLQVYYDAIKFKGEKDGALLIAVCRGK
type: DOMAIN
name: ATP-dep_Helicase_C
description: ATP-dependent helicase, C-terminal
Protein sequence:
MARFPEAEERLLNKKICMKCNARNAIRATRCRKCGYGTLRVKSKESKGA

Annotated regions:
phrase: MARFPEAEERLLNKKICMKCNARNAIRATRCRKCGYGTLRVKSKE
type: DOMAIN
name: Ribosomal_eL40_dom
description: Large ribosomal subunit protein eL40 domain

phrase: LNKKICMKCNARNAIRATRCRKCGYGTL
type: DOMAIN
name: Ribosomal_eL40_dom
description: Large ribosomal subunit protein eL40 domain
Protein sequence:
MQQIPMTVRGAEQLREELDFLKNVRRPEIIKAIAEAREHGDLKENAEYHAAREQQGFCEGRIQEIEGKLGNAQIIDVSKMPNNGKVIFGATVVLVNTNTDEEVTYRIVGDDEADIKSGLISVNSPIARGLIGKELDDTVNITTPGGVVEFDIIEVNYI

Annotated regions:
phrase: NNGKVIFGATVVLVNTNTDEEVTYRIVGDDEADIKSGLISVNSPIARGLIGKELDDTVNITTPGGVVEFDIIEVN
type: DOMAIN
name: Tscrpt_elong_fac_GreA/B_C
description: Transcription elongation factor, GreA/GreB, C-terminal

phrase: ELDFLKNVRRPEIIKAIAEAREHGDLKENAE
type: CONSERVED_SITE
name: TF_GreA/GreB_CS
description: Transcription elongation factor, GreA/GreB, conserved site

phrase: IPMTVRGAEQLREELDFLKNVRRPEIIKAIAEAREHGDLKENAEYHAAREQQGFCEGRIQEIEGKLGNAQ
type: DOMAIN
name: Tscrpt_elong_fac_GreA/B_N
description: Transcription elongation factor, GreA/GreB, N-terminal

phrase: SVNSPIARGLIGKELD
type: CONSERVED_SITE
name: TF_GreA/GreB_CS
description: Transcription elongation factor, GreA/GreB, conserved site