nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MEPLDTLNLWMERARDRARAISFGRFLWHRFLDDRLFQAAAALAYTTVFALVPLAIVVFGVLSAFPVFDRWSDQLSDYVFSNFVPNAARAAEGYLRQFSASAGQLTAAGFIALVVSLLITLNSVEETFNQIWRVGSTRPKLTRFLVYWTVLTLGAMLAAASLAVSARVFAMPLFGTQEGRWLADLALRLAPILIEFVCITLMFRVVPHHTVKWRHAVPGAILAAVILELVKWGIGAYLGSFQSYQKLYGTVAFVPILLLWIYLCWVAVLLGASLSSSMAAFRYQPVELRLPQGYEFYGLLRLLGRFHHARAKGKGLADDEILRLEPMLTDSLLQDLACNLQEIGLLRRDERGEWLLARDLEQVSLSDLYECTQLRIPVAEQHLPYRDDTLGRVALAALDDLRLPLRERLKRKVSDIYTDSGDTP

Annotated regions:
Protein sequence:
MLGKGRPLVVRGRTVEQVWRQAVTGIKVHGEKVERERGPVKEVRGLIAHLEPSGPESFDIPDDYPLDEHSVRAYEDQLLDPELRGFEYTYGHRLRRYFGLDQVTKIVERLSESNNTRRAIAVTWDPRRDLDEEEVPCLTALQLQSDGGSGLELHAFYRSWDVGKALVANMIALRRLQEHVAERAGLEPTTLTVYAANAHVYEEDLPDLP

Annotated regions:
phrase: RGFEYTYGHRLRRYFGLDQVTKIVERLSESNNTRRAIAVTWDPRRDLDEEEVPCLTALQLQSDGGSGLELHAFYRSWDVGKALVANMIALRRLQEHVAERAGLEPTTLTVYAANAHVYEEDL
type: DOMAIN
name: Thymidate_synth/dCMP_Mease_dom
description: Thymidylate synthase/dCMP hydroxymethylase domain

phrase: TVEQVWRQAVTGIKVHGEKVERERGPVKEVRGLIAHLEPSGPESFDIPDDYPLDEHSVRAYEDQLLDPELRGFEYTYGHRLRRYFGLDQVTKIVERLSESNNTRRAIAVTWDPRRDLDEEEVPCLTALQLQSDGGSGLELHAFYRSWDVGKALVANMIALRRLQEHVAERAGLEPTTLTVYAANAHVYEEDLPD
type: DOMAIN
name: Thymidate_synth/dCMP_Mease_dom
description: Thymidylate synthase/dCMP hydroxymethylase domain
Protein sequence:
MAHKKGTGSTRNGRDSNAKRLGVKCFGGELVHPGYILVRQRGTKFHPGVNVRRGGDDTLFAVATGIVTFERYGKWRKKVSVYPVEAAAQ

Annotated regions:
phrase: GYILVRQRGTKFHP
type: CONSERVED_SITE
name: Ribosomal_bL27_CS
description: Large ribosomal subunit protein bL27, conserved site
Protein sequence:
MDKRFAVVLAAGQGTRMKSKLYKVLHPVCGKPMVEHVADEALKLSLSKLVTIVGHGAEEVRKQLGSKSEYALQNEQLGTAHAVKQAKEHLANEQGTTIVICGDTPLITAETMEALLLEHKKQDAKATVLTALAEDPAGYGRIIRGAKGEVSKIVEHKDATPEERLVQEVNTGTYCFDNEALFQALEQVSNDNVQGEYYLPDVIEILKNAGSSVAAYQTENFKETLGVNDRVALSMAEEYMRQRINKRHMQNGVSLIDPNNTYISPEAVIGRDTVIYPGTILKGKVAIGEDCLVGPNSELENCKVGDRSVIKQSVVSSSEVGNDVSIGPFAHIRPDSTIGNDVKIGNFVEIKKTQFGDRSKASHLSYVGDAEVGTDVNLGCGSITVNYDGKNKFLTKIEDGVFIGCNSNLVAPVTIQKGAYVAAGSTITETVPEDSLSIARARQVNKEDYVKKMRKK

Annotated regions:
phrase: AVIGRDTVIYPGTILKGKVAIGEDCLVGPNSEL
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: SEVGNDVSIGPFAHIRPDSTIGNDVKIGNFVEIK
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: TKIEDGVFIGCNSNLVAPVTIQKGAYVAAGSTI
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: GVSLIDPNNTYISPEAVIGRDTVIYPGTILKGKVAIGEDCLVGPNSELENCKVGDRSVIKQSVVSSSEVGNDVSIGPFAHIRPDSTIGNDVKIGNFVEIKKTQFGDRSKASHLSYVGDAEVGTDVNLGCGSITVNYDGKNKFLTKIEDGVFIGCNSNLVAPVTIQKGAYVAAGSTITETVPEDSLSIARAR
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain

phrase: AVVLAAGQGTRMKSKLYKVLHPVCGKPMVEHVADEALKLSLSKLVTIVGHGAEEVRKQLGSKSEYALQNEQLGTAHAVKQAKEHLANEQGTTIVICGDTPLITAETMEALLLEHKKQDAKATVLTALAEDPAGYGRIIRGAKGEVSKIVEHKDATPEERLVQEVNTGTYCFDNEALFQALEQVSNDNVQGEYYLPDVIEILKNAGSSVAA
type: DOMAIN
name: NTP_transferase_dom
description: Nucleotidyl transferase domain
Protein sequence:
MDKYKNLTRSLTREFINLNPIQRGGILPKEAKKAVYEYWDGYSVCDYCHGRLDEVTCPPIKDFLEDIAKFLNMDCARPTHGAREGKFIVMHAICKEGDYVVLDKNAHYTSYVAAERAKLNVAEVGYEEEYPTYKINLEGYKEVIDNLEDKGKNVGLILLTHVDGEYGNLNDAKKVGKIAKEKGIPFLLNCAYTVGRMPVNGKEVKADFIVASGHKSMAASAPCGILAFSEEFSDKITKTSEKFPVKEIEMLGCTSRGLPIVTLMASFPHVVERVKKWDEELKKTRYVVDELEKIGFKQLGIKPKEHDLIKFETPVLDEIAKKDKRRGFFFYDELKKRGIGGIRAGVTKEIKMSVYGLEWEQVEYVVNAIKEIVESCK

Annotated regions:
Protein sequence:
MSGGLTAERMLAAYAQGVFPMAESASAAQLYWFEPALRGILPVGGVHVSRSMRRFLRHCDWRATIDNDFAGVVAGCADREETWINAPLLALYQDLFRMGHAHSLEIRAGEDLIGGMFGLTLGGAFFAESMFSRRSNASKAALIWMSSHLARCGFTLWDTQYPNPHLASMGGRAIPRLEYRRRLAAALRIPADFTAHALPDVQALLQEITQTS

Annotated regions:
Protein sequence:
MDNGIFIVATIFIVNILYVTIYTVRLLLTMKGYRYLAALSSVFEMIIYVVALSLVLDNLNNIANVLAYAIGFGVGIIVGMKIEERIALGYITVNVITKEYNLDLPNQIRDLGYGVTSWLASGRDGERMMLEILTQRKNERKLYKHIIEIDNGAFIVSSEPKQIHGGFWVKQVRK

Annotated regions:
phrase: TVRLLLTMKGYRYLAALSSVFEMIIYVVALSLVLDNLNNIANVLAYAIGFGVGIIVG
type: DOMAIN
name: DUF5698
description: Domain of unknown function DUF5698

phrase: YGVTSWLASGRDGERMMLEILTQRKNERKLYKHIIEIDNGAFIVSSEPKQIH
type: DOMAIN
name: DUF2179
description: Domain of unknown function DUF2179
Protein sequence:
MSVADIRKGAEQKMQRSIDAFKNDLSKIRTGRAHTGLLDHIQCDYYGSPVPISQVANLTLIDARTIGVQPWEKKMVQVVEKAIRESDLGLNPATQGDVIRVPMPALTEERRRELTKVVKSEAETAKVAVRNLRRDANEQLKKLVKDKEISEDDERRAGDDVQKLTDKFVAEIDKLVVTKEAEIMTV

Annotated regions:
phrase: FKNDLSKIRTGRAHTGLLDHIQCDYYGSPVPISQVANLTLIDARTIGVQPWEKKMVQVVEKAIRESDLGLNPATQGDVIRVPMPALTEERRRELTKVVKSEAETAKVAVRNLRRDANEQLKKLVKDKEISEDDERRAGDDVQKLTDKFVAEIDKLVVTKEAEI
type: DOMAIN
name: Ribosome_recyc_fac_dom
description: Ribosome recycling factor domain
Protein sequence:
MQLVVLAGVFLLIWFLVFRRMGAGGGGAGFLGSFGRSRHRLANKEQSKVTFQDVAGIDEAKEEVTEIIEFLKNPRKFTRLGGRIPRGVLLVGEPGCGKTLLAKAIAGEAEVPFFSISGSDFVEMFVGVGASRVRDLFKQAKDSSPCIIFLDEIDAVGRKRGMGFNGGGHDEREQTLNAILVEMDGFDSSDQVIVIAATNRMDVLDPALTRPGRFDRQINVPLPDLKGRVQILRIYADKVKCGPDVDLNRLARGTPMFSGADLAALVNEAAIAATMAEKEYVEQADMEEARDKVRWGRARKSRVIDEKEKEITAWHEAGHALVQHHSEDADPLHKVSIIPRGEMGGATFSLPEKDRYLYTRRYCKATLQVVLGGRVAEELFSGDISSGAASDIAHATALARRMVLDWGMSDKLGFVRYSADDHRPMFPDLGAKEYSDRTAEVIDAEVRALIDEAYHATRTQLETHRQELQRLAAALLKYETLSADDVRRICEGETLDKPTVNDLLEREHAKAAPADAPPAPATKPVAEPG

Annotated regions:
phrase: IPRGVLLVGEPGCGKTLLAKAIAGEAEVPFFSISGSDFVEMFVGVGASRVRDLFKQAKDSSPCIIFLDEIDAVGRKRGMGFNGGGHDEREQTLNAILVEMDGFDSSDQVIVIAATNRMDVLDPALTRPGRFDRQINVPLP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: DVDLNRLARGTPMFSGADLAALVNEAAIAATMAEKEYVEQADME
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: VIVIAATNRMDVLDPALT
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: RVIDEKEKEITAWHEAGHALVQHHSEDADPLHKVSIIPRGEMGGATFSLPEKDRYLYTRRYCKATLQVVLGGRVAEELFSGDISSGAASDIAHATALARRMVLDWGMSDKLGFVRYSADDHRPMFPDLGAKEYSDRTAEVIDAEVRALIDEAYHATRTQLETHRQELQRLAAALLKYETLSADDVRR
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: VLLVGEPGCGKTLLAKAIAGEAEVPFFSISGSDFVEMFVGVGASRVRDLFKQAKDSSPCIIFLDEIDAVGRKRGMGFNGGGHDEREQTLNAILVEMDGFDSSDQVIVIAATNRMDVLDPALTRPGRFDRQINVP
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core
Protein sequence:
MQGRIVKSLAGFYYVESDGVVYQTRARGNFRKKGQIPYVGDWVEFSSQDQSEGYILSIEERKNSLVRPPIVNIDQAVVIMSAKEPDFNANLLDRFLVLLEYKMIQPIIYISKLDLLDDLVVIDDIREHYQNIGYVFCYSQEELLPLLANKVTVFMGQTGVGKSTLLNKIAPELKLETGEISGSLGRGRHTTRAVSFYNVHKGKIADTPGFSSLDYEVDNAEDLNESFPELRRLSHFCKFRSCTHTHEPKCAVKEALTQGQLWQVRYDNYLQFLSEIESRRETYKKVIKRK

Annotated regions:
phrase: IEERKNSLVRPPIVNIDQAVVIMSAKEPDFNANLLDRFLVLLEYKMIQPIIYISKLDLLDDLVVIDDIREHYQNIGYVFCYSQEELLPLLANKVTVFMGQTGVGKSTLLNKIAPELKLETGEISGSLGRGRHTTRAVSFYNVHKGKIADTPGFSSLD
type: DOMAIN
name: RsgA_GTPase_dom
description: RsgA GTPase domain

phrase: KNSLVRPPIVNIDQAVVIMSAKEPDFNANLLDRFLVLLEYKMIQPIIYISKLDLLDDLVVIDDIREHYQNIGYVFCYSQEELLPLLANKVTVFMGQTGVGKSTLLNKIAPELKLETGEISGSLGRGRHTTRAVSFYNVHKGKIADTPGFSS
type: DOMAIN
name: G_CP_dom
description: Circularly permuted (CP)-type guanine nucleotide-binding (G) domain

phrase: VNIDQAVVIMSAKEPDFNANLLDRFLVLLEYKMIQPIIYISKLDLLDDLVVIDDIREHYQNIGYVFCYSQEELLPLLANKVTVFMGQTGVGKSTLLNKIAPELKLETGEISGSLGRGRHTTRAVSFYNVHKGKIADTPGF
type: DOMAIN
name: RsgA_GTPase_dom
description: RsgA GTPase domain

phrase: QGRIVKSLAGFYYVESDGVVYQTRARGNFRKKGQIPYVGDWVEFSSQDQSEGY
type: DOMAIN
name: RsgA_N
description: Ribosome biogenesis GTPase RsgA, N-terminal

phrase: MQGRIVKSLAGFYYVESDGVVYQTRARGNFRKKGQIPYVGDWVEFSSQDQSEGYILSIEERKNSLV
type: DOMAIN
name: RsgA_N
description: Ribosome biogenesis GTPase RsgA, N-terminal
Protein sequence:
MVALHTLLLTAFAAVSLANPIPAPELEARQIINANDLENGVCKPVVLIFARGSTELGNMGAIAGMPTCNALKLALGSQNVACQGVGGAYTASLIPNFLPANTNQASIREATGVFEMAHTRCPNSQIVAGGYSQGSAVMDNTIQDLPDVIKNKVKGVVLFGFTRNLQDLGRIPNYPKEQTKVICAVGDLVCVGTLIITPAHLTYTLNAPEAAQFLASMVSV

Annotated regions:
phrase: CAVGDLVCVGTLIITPA
type: CONSERVED_SITE
name: CUTINASE_2
description: Cutinase, aspartate and histidine active sites

phrase: PNSQIVAGGYSQ
type: CONSERVED_SITE
name: CUTINASE_1
description: Cutinase, serine active site
Protein sequence:
MSYCKIEAPYPTAEAGEKRIIFALDPKGDEAEQEQYMLQLIPGRVLEMSRNDAANHQTLGGSIEQHTVEGWGAKFFHVKLAKQAASTLMHVHDEDHSEKVRKFVAMPNPPLFPYRSRCPVVVYLPNDAELRYGIWCGGQQMQAVTE

Annotated regions:
Protein sequence:
MPLQTFLFEIGTEELPADFVRSAITQWQGLIPPGLAAEFLQPESVEIYGTPRRLAVLIKGLPECQPDRLEEIKGPPASAAFKDGQPTPAALGFAKKQGVNPEDFEIRSTPKGDFIFVNKQLQGQASRDLLPKLALSWLKALDGRRFMRWGDGDWRFPRPIRWLVCLLDDQVLPLQIDNGSTTLVGDRLSRGHRILHPADVSLEHGQNYLAQLKTAGVVVDPQERRAMIEQQITTQAATLEGEAIIYEDLLDEVEQLVEYPTAVLGKFDQEFLSLPREVTTTVMVTHQRYFPVVDKDGRLLPHFITIANGDPSKGDIIAAGNGRVIRARLADAKFFYQADCDDSLDSYLPQLETVTFQEELGTMRDKVDRIMEMAAAIADQLGVTEQQRGEIDSTAMLCKADLVTQMVYEFPELQGIMGEKYALVSGESAAVAQGIVEHYLPRHQDDDLPQGLPGQVVGMADRLDTLVSIFGLGLLPTGSSDPFALRRAANAVINVAWAASLEINLLELLTQGCRDFVTSHPDKTSPLQALKTFFLQRLQTLLQDEQGIDYDLVNAVLGNGETNCDEAQSRLHDRLLADLQDVKERAQYLQELRDNGHLDAIYPTVNRSAKLASKGTLPTDQLDPRPVIQAPQLVQDSEKAVYQALLAIYPKAVEVQESRDYETLVNALHELAPTVAEFFDGPDSVLVMAENDELRQNRLNLLGLIRNYALILGDFGAIVKGI

Annotated regions:
phrase: PVIQAPQLVQDSEKAVYQALLAIYPKAVEVQESRDYETLVNALHELAPTVAEFFDGPDSVLVMAENDELRQNRLNLLGLIR
type: DOMAIN
name: DALR_anticod-bd
description: DALR anticodon binding
Protein sequence:
MLLAPGDVIKRSSEELKQRQIQINLVDWTESEGGKEDKTEPKEESKAEGSKDGEGTQSESGQKEEGGKETKDADVDRRIHTAVGSGSSTKGPGERANENADRGDGKVGGGGGDADAGVGATGTNGRRWVVLTEEIARAIESKYGTKIDVYRDEVPAQIIEVERSLQKELGISREGVAEQTERLRDLRRKEKNGTHAKAVERGGRKQRKESHGDAQREGVEEEKTSEEPARIGITIEGVMSQKKLLSMIGGVERKMAPIGARESAVMLVSNSIKDVMRATAYFTAPTGDPHWKEVAREASKKKNILAYTSTGGDAKTEFLRLFDHL

Annotated regions:
Protein sequence:
MAKQTVADLKDIKGKKVLVRVDFNVPIKGGVIGDDNRIVAALPTIQYIIDNGGKAILLSHLGRIKSDEDKKELTLKPVAARLGELLNKDVAFVASNEGQELEDAINAMTDGQVLVMENTRFQDIDNDFGKRESKNDPKLGEYWASLGDMFVNDAFGTAHRAHASNVGIATAMKANNKPAVAGYLLEKEIKFLGEAVDAPERPFVAILGGAKVSDKIGVIEHLLAKADKVIVGGGMTYTFYAAKGLSIGNSLVEEDKIELAKELIEKAGDKLVLPVDNVVADAFSNDAKTETVEGNIPDGYMALDIGPKAIADFENVLKDAKTVVWNGPMGVFEMDNFAKGTLAIGEFLGNLSGATTIVGGGDSTAAVKKLGVGDKLTHISTGGGASLEYLEGKTLPGIAAISDK

Annotated regions:
phrase: KVLVRVDFNV
type: CONSERVED_SITE
name: Phosphoglycerate_kinase_CS
description: Phosphoglycerate kinase, conserved site
Protein sequence:
MGTEAEQPSPPSPPAQQQEQTNPPLWNAQNQKPARLYRLVLFFIAGSLAAWTIHALSNSNLVWKLRQLHHLPTAHYLQTRDEFAVYSVEELNAFKEIYDKSVSDSVGASYTKDEQTSINEALVSLRMAQDMYLAGKDDKASRLFEHALALAPRHPEVLLRYGEFLEHSQRNIVLADQYYFQALTISPSNSEALANRQRTADVVQTLDERRLQSLDSKRDALSAIHESNGALRRAKKEAYFQHIYHSVGIEGNTMTLAQTRSILETRMAVDGKSIDEHNEILGMDLAMKYINASLVQKIDITIKDILELHRRVLGHVDPIEGGEFRRNQVYVGGHVPPGPGDLALLMQRFERWLNSEHSSTLHPVNYAALAHYKLVHIHPFIDGNGRTSRLLMNTLLMRAGYPPVIIPKQQRNKYYHFLKLANEGDIRPFVRFIADCTEKTLDLYLWATSDLPQQIPMLIQTESEAGERLAQMQSPNVAQRSSILEFYESGSGALP

Annotated regions:
phrase: ITIKDILELHRRVLGHVDPIEGGEFRRNQVYVGGHVPPGPGDLALLMQRFERWLNSEHSSTLHPVNYAALAHYKLVHIHPFIDGNGRTSRLLMNTL
type: DOMAIN
name: Fido
description: Fido domain

phrase: ITIKDILELHRRVLGHVDPIEGGEFRRNQVYVGGHVPPGPGDLALLMQRFERWLNSEHSSTLHPVNYAALAHYKLVHIHPFIDGNGRTSRLLMNTLLMRAGYPPVIIPKQQRNKYYHFLKLANEGDIRPFVRFIA
type: DOMAIN
name: Fido
description: Fido domain
Protein sequence:
MGKDFKSMVTRCIYVGKENDNVKKLKTATEELKDLRNIVMKRVKMYEDQQKLKRLEKVQVWLRQADVAIKEAEEMLITLMSSSSSNGSSMMSFHKLDKKLCKKLKEVQEIKSRGTFDVVVENSGIGSGSMMISNVDRDDQTVGLEAVSGLVWRCMTVDNTGIIGLYGVEGVGKTTVLTQVNNRLLQHKLNGFDFVIWVFVSKNVNLEKIQDTIREKIGFLDRSWMSKTEEEKAGKIFEILSKRRFALFLDDVWEKVDLVKAGVPPPDGLNRSKIVFTTCSDEVCQEMGAQTKIKMEKLPWERAWDLFKMNAGEEIVKSHPDITKVAQEVAAKCDGLPLALVTIGRAMASKKTPQEWRDALYILSTSPPNFSGPIL

Annotated regions:
phrase: MTVDNTGIIGLYGVEGVGKTTVLTQVNNRLLQHKLNGFDFVIWVFVSKNVNLEKIQDTIREKIGFLDRSWMSKTEEEKAGKIFEILSKRRFALFLDDVWEKVDLVKAGVPPPDGLNRSKIVFTTCSDEVCQEMGAQTKIKMEKLPWERAWDLFKMNAGEEIVKSHPDITKVAQEVAAKCDGLPLALVTIGRAMASKKTPQEWRDALYIL
type: DOMAIN
name: NB-ARC
description: NB-ARC
Protein sequence:
MFNPHVLDVPAVIFDNGSGLCKAGVSGEIGPRHVINSVLGHRKFNMPSARLNQYFVGQEALYKFDALHLHYPIKRGLVTGWDDMEKLWKHLFEWELGVKPSQQPVLMTEPSLNPREIREKLAEMMFENFSVPGFYLSNHAVAALYASACVTGLVVDSGDGVTCAVPIFEGYSLPHAVTKLYTAGRDITEHLTQLLFANGFNFPCILNKAVANNIKEKLCYIALEPEKELRKSRGEVLGAYRLPDGHVIHFGDELYQVPEVLFAPDQLGIHSPGLSKMVSSSIMKCDTDIQNKLYAEIVLSGGTTLFPGLEERLMKEVEQLASKGTPIKITASPDRCFSAWIGASIMTSMSSFKQMWVTSADFKEYGTSVVQRRCF

Annotated regions:
Protein sequence:
MLPYIGHNSYQQHQFPLPEMEIPEKWKLSYEQEAITAPACPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNIPVGGGCRKRSRSRQNSHKRFGRNENRPDGLINQDDGFQSSPPGSDIDLAAVFAQYVTDRSPSSTDNTTGSDQDSPITTTTHALESLSWDICQETDVDLGFYGEFNNLTQKTKEDQEVFGQFLQEDREEIFEFQGLLDDKEIQEILECSFSEEPDQLVSQGSFMINGDNWSSTDLTRFGI

Annotated regions:
phrase: CPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKG
type: DOMAIN
name: Znf_Dof
description: Zinc finger, Dof-type

phrase: ACPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNIPVGGGCRKRS
type: DOMAIN
name: Znf_Dof
description: Zinc finger, Dof-type

phrase: PACPRCASSNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNIPVGGGCRKRS
type: DOMAIN
name: Znf_Dof
description: Zinc finger, Dof-type
Protein sequence:
MVGSGGTGAPPPRSSPMTTLYVTQPGSVVRSEGGSLTVWVETEADDPGPNDSPVRRKRLASVEPHRLESLVLLGFTTITANAMRLCMANKIAVSLLDGGGGLAARVVPPEARSADLRLHQYALHLDPPERLIRARAVVTAKLRNAAAVLRGIRSNQASSAALASAITQTEASAEAAAAAVSAESLLGIEGNGAHQYFAGLRTAFVGGIPFLGRAQRPPPDPANSLLSFGYVLLGNRLTGLLEARGVDPCLGFFHDLRPGRPSLALDLLEELRHPVVDRLALRICNLRKIQPQHFEPDAERPGGVKLTVDGRKIFLEEWEGHLARPLREPGVAAEHRLDVHRLLQRQVDRLVSDLRGGEPYRPFRFGTSRPG

Annotated regions:
Protein sequence:
MEENTALVVYYTKLHKNSFNALIGALEIDEYFDNLPIYFANKKDIFNLKEVLKKYDKVVIAISFFTTELWKTYELINELKAKYQSYRNKIIYLAGGPHPTGDPKGTLKLGFDVVCIGEGEETFPEFIKAVNEDEDYKKVKGIAYLNDNEFIYTGRRKPVDLNKYPPFPVKHNKFGHIEITRGCPYKCYFCQTPRIFGKKIRHRDVENIYKYVEIMAERNLKDIRFITPNAFGYGSKDGKTLNIDKIEKLLESIREILGNNGRIFFGTFPSEVRPEHVNIETVDLILRYADNKNLVIGAQSGSEKVLELCHRGHTVEDVYNAVRVARKAGLGVDVDFIFGLPGETEEDVEKTIKVMKDLIKMGAKIHAHTFMPLPQTPFAKANPGKVDKKIIRAMRYEIPKGIFHGTWHNQEIIAQKISKYLKTGKL

Annotated regions:
phrase: VKHNKFGHIEITRGCPYKCYFCQTPRIFGKKIRHRDVENIYKYVEIMAERNLKDIRFITPNAFGYGSKDGKTLNIDKIEKLLESIREILGNNGRIFFGTFPSEVRPEHVNIETVDLILRYADNKNLVIGAQSGSEKVLELCHRGHTVEDVYNAVRVARKAGLGVDVDFIFGLPGETEEDVEKTIKVMKDLIKMGAKIHAHTFMPLPQTPFAKANPGKVDKKIIRAMRYEIPKGIFHGTWH
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: MEENTALVVYYTKLHKNSFNALIGALEIDEYFDNLPIYFANKKDIFNLKEVLKKYDKVVIAISFFTTELWKTYELINELKAKYQSYRNKIIYLAGGPHPTGDPKGTLKLGFDVVCIGEGEETFPEFIKAVNEDEDY
type: DOMAIN
name: Cobalamin-bd
description: Cobalamin (vitamin B12)-binding domain

phrase: KFGHIEITRGCPYKCYFCQTPRIFGKKIRHRDVENIYKYVEIMAERNLKDIRFITPNAFGYGSKDGKTLNIDKIEKLLESIREILGNNGRIFFGTFPSEVRPEHVNIETVDLILRYADNKNLVIGAQSGSEKVLELCHRGHTVEDVYNAVRVARKAGLGVDVDFIFGLPGETEEDVEKTIKVMKDLIKMGAKIHAHTFMPLPQTPFAKANPGKVDKKIIRAMRY
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: IEITRGCPYKCYFCQTPRIFGKKIRHRDVENIYKYVEIMAERNLKDIRFITPNAFGYGSKDGKTLNIDKIEKLLESIREILGNNGRIFFGTFPSEVRPEHVNIETVDLILRYADNKNLVIGAQSGSEKVLELCHRGHTVEDVYNAVRVARKAGLGVDVDFIFGLPGETEEDVEKTI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: DNLPIYFANKKDIFNLKEVLKKYDKVVIAISFFTTELWKTYELINELKAKYQSYRNKIIYLAGGPHPTGDPKGTLKLGFDVVCIGEGEETFPEFIKAVNEDEDYKKVKGIAYLNDNEFIYTGRRKPVDLNKYPPFPVKHNKFGHIEITRGCPYKCYFCQTPRIFGKKIRHRDVENIYKYVEIMAERNLKDIRFITPNAFGYGSKDGKTLNIDKIEKLLESIREILGNNGRIFFGTFPSEVRPEHVNIETVDLILRYADNKNLVIGAQSGSEKVLELCHRGHTVEDVYNAVRVARKAGLGVDVDFIFGLPGETEEDVEKTIKVMKDLIKMGAKIHAHTFMPLPQTPFAKANPGKVDKKIIRAMRYEIPKGIFHGTW
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VVYYTKLHKNSFNALIGALEIDEYFDNLPIYFANKKDIFNLKEVLKKYDKVVIAISFFTTELWKTYELINELKAKYQSYRNKIIYLAGGPHPTGDPKGTLKLGFDVVCIGEGEETFPE
type: DOMAIN
name: Cobalamin-bd
description: Cobalamin (vitamin B12)-binding domain
Protein sequence:
MGIFSIANQHIRFAVKLACAIVLALFIGFHFQLETPRWAVLTAAIVAAGPAFAAGGEPYSGAIRYRGMLRIIGTFIGCIAALIIIISMIRAPLLMILVCCVWAGFCTWISSLVRIENSYAWGLSGYTALIIVITIQMEPLLTPQFALERCSEIVIGIGCAILADLLFSPRSIKQEVDRELDSLLVAQYQLMQLCIKHGDSEEVDNAWGDLVRRTAALEGMRSNLNMESSRWVRANRRLKALNTLSLTLITQSCETYLIQNTRPELITDTFRELFETPVETVQDVHRQLKRMRRVIVWTGERETPVTLYSWVGAATRYLLLKRGVISNTKISATEEEILQGEPVVKVESAERHHAMVNFWRTTLSCILGTLFWLWTGWTSGNGAMVMIAVVTSLAMRLPNPRMVCIDFIYGTLAALPLGLLYFLVIIPNTQQSMLLLCLSLAVLGFFIGIEVQKRRLGSMGALASTINIIVLDNPMTFHFSQFLDSALGQIVGCMLAFIVILLVRDKSKDRTGRVLLNQFVSAAVSAMTTNVVRRKENRLPALYQQLFLLMNKFPGDLPKFRLALTMIIAHQRLRDAPIPVNEDLSVFHRQLRRTADHVISAGSDDKRRRYFGQLLDELDIYQEKLRIWEAPPQVTEPVKRLTGMLHKYQNALTDS

Annotated regions:
Protein sequence:
MLNFSKKNILLCVTGGIAAYKSAEIIRLFKKNGADVRVVMTESAKEFITPLTLQAVSGNDIHDSLLDEKAESAMGHIELAKWADIILIAPCTAETMSKITHGRADDLMGALILASKANVYIAPAMNTNMWMDKGTQDNYQKLLSRNYTFIGPADGEQACGDVGPGRMVEPNDIIDLIISSLKNGPLANKIVTITAGPTREQIDPVRFISNNSSGKMGYSIAEAALELGAKVNLVSGPVSLKADKSINLIKVNSANQMLESVMNCMSDSDIFIGCAAVSDFKPSDYSESKIKKDSADNLDIKLEKNKDILSIVSDKFPTAYVVGFAAETSNVKENAKSKLISKNLNMIISNDVSDKSIGFDVDENEVNVITKDEIIFLKRDKKIRIARNVLNTIAAQINN

Annotated regions:
phrase: LANKIVTITAGPTREQIDPVRFISNNSSGKMGYSIAEAALELGAKVNLVSGPVSLKADKSINLIKVNSANQMLESVMNCMSDSDIFIGCAAVSDFKPSDYSESKIKKDSADNLDIKLEKNKDILSIVSDKFPTAYVVGFAAETSNVKENAKSKLISKNLNMIISNDVSDKSIGFDVDENEVNV
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal

phrase: KNILLCVTGGIAAYKSAEIIRLFKKNGADVRVVMTESAKEFITPLTLQAVSGNDIHDSLLDEKAESAMGHIELAKWADIILIAPCTAETMSKITHGRADDLMGALILASKANVYIAPAMNTNMWMDKGTQDNYQKLLSRNYTFIGPADGEQACGDVGPGRMVEPNDIIDLIIS
type: DOMAIN
name: Flavoprotein
description: Flavoprotein
Protein sequence:
MTSNPPDLRPDLAPKPTFGTAPRPDQPTLGMVSLGCPKALVDSERILTRLRAEGYGISADYAGADAVIVNTCGFLDSAKAESLEAIGEALKENGKVIVTGCLGAEPDYIREHHPRILAVTGPHQYEQVLDAVHAAVPPSPDPFVDLLPATGVSLTPRHFSYLKISEGCNHKCKFCIIPDMRGKLASRPAHAVLREAEKLVTAGVRELLVISQDTSAYGLDRKYDVNPWKDGEVRSHITDLSRALGELAPADQLWVRLHYVYPYPHVRELIPLMADPENAVLPYLDIPFQHAHPDVLRRMARPAAAAKTLDEIRAWRAICPDITLRSTFIVGYPGETEAEFQHLLDWMDEAQLDRVGCFKYENVDGARSNDLPDHVAEEVKQNRWERFMEKAQAISEAKLASKVGQTLQVIVDEIDEDGIATCRTKADAPEIDGNLFIDEGTANLSVGDLVTVEVDEAGEYDLWGALR

Annotated regions:
phrase: LTPRHFSYLKISEGCNHKCKFCIIPDMRGKLASRPAHAVLREAEKLVTAGVRELLVISQDTSAYGLDRKYDVNPWKDGEVRSHITDLSRALGELAPADQLWVRLHYVYPYPHVRELIPLMADPENAVLPYLDIPFQHAHPDVLRRMARPAAAAKTLDEIRAWRAICPDITLRSTFIVGYPGETEAEFQHLLDWMDEAQLDRVGCFKYENVDGARSNDLPDHVAEEVKQNRWERFMEKAQAISE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: HFSYLKISEGCNHKCKFCIIPDMRGKLASRPAHAVLREAEKLVTAGVRELLVISQDTSAYGLDRKYDVNPWKDGEVRSHITDLSRALGELAPADQLWVRLHYVYPYPHVRELIPLMADPENAVLPYLDIPFQHAHPDVLRRMARPAAAAKTLDEIRAWRAICPDITLRSTFIVGYPGETEAEFQHLLDWMDEAQLDRVGCFKYENVDGARSNDLPDHVAEEVKQNRWERFM
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: VGQTLQVIVDEIDEDGIATCRTKADAPEIDGNLFIDEGTANLSVGDLVTVEVDEAGEYDLWG
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: QPTLGMVSLGCPKALVDSERILTRLRAEGYGISADYAGADAVIVNTCGFLDSAKAESLEAIGEALKENGKVIVTGCLGAEPDYIREHHPRILAVTGPHQYEQVLDAVHAAVPPSPDPFVDLLPATGVSLTPRHFSYLKISEGCNHKCKFCIIPDMRGKLASRPAHAVLREAEKLVTAGVRELLVISQDTSAYGLDRKYDVNPWKDGEVRSHITDLSRALGELAPADQLWVRLHYVYPYPHVRELIPLMADPENAVLPYLDIPFQHAHPDVLRRMARPAAAAKTLDEIRAWRAICPDITLRSTFIVGYPGETEAEFQHLLDWMDEAQLDRVGCFKYENVDGARSNDLPDHVAEEVKQNRWERFMEKAQAISEAKLASKVGQTLQVIVDEIDEDGIATCRTKADAPEIDGNLFIDEGTANLSVGDLVTVEVDEAGEYDLWGA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: KISEGCNHKCKFCIIPDMRGKLASRPAHAVLREAEKLVTAGVRELLVISQDTSAYGLDRKYDVNPWKDGEVRSHITDLSRALGELAPADQLWVRLHYVYPYPHVRELIPLMADPENAVLPYLDIPFQHAHPDVLRRMARPAAAAKTLDEIRAWRAICPDITLRSTFIVGYPGETEAEFQHLLD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: PTLGMVSLGCPKALVDSERILTRLRAEGYGISADYAGADAVIVNTCGFLDSAKAESLEAIGEALKENGKVIVTGCLGAEPDYIREHHPRILAVTGPHQYEQVLDAVHAAV
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: ASKVGQTLQVIVDEIDEDGIATCRTKADAPEIDGNLFIDEGTANLSVGDLVTVEVDEAGEYDLWGAL
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: MVSLGCPKALVDSERILTRLRAEGYGISADYAGADAVIVNTCGFLDSAKAESLEAIGEALKENGKVIVTGCLGAEPDYIREHH
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal
Protein sequence:
MSVKYVFVTGGVVSGLGKGITAASLGRLLKARGYRVTMQKLDPYINVDPGTMNPIQHGEVFVTEDGTETDLDLGHYERFIDENLGVHSNVTTGKIYWSVLHKERRGDYGGRTVQVIPHITNEIKSRFYRSDKEDCIAIIEVGGTVGDIESQPFLEAIRQFQMEVGRENAILIHVTLIPYLRASGELKTKPTQASVKQLQGMGIQPDILVCRSEVELGTDVKEKIALFCNVPVDHVLQNLDVEYLYEAPLAMEKEHLAEVVCRSLNLPCGTPDLEGWKEMVWRLRHPERSVTIALVGKYVQLHDAYLSVAEALKHGGIENRCSVNIRWVDSEQVTEATAEALLGGADGILVPGGFGNRGIEGKIQAVRYARTKGIPYLGICLGMQLAVIEFARDVIGFADADSTELNPQTSHPVIALLPEQNGVTDLGGTLRLGSYPCVLEEGSLAEQLYGTREITERHRHRYEFNNEYRDILKSHGLRLSGLSPDGRIVEMVELPEHPYFIATQGHPEFKSRPNHAHPLFVGLVQAALRENKRKEDEKKGGDA

Annotated regions:
phrase: VTIALVGKYVQLHDAYLSVAEALKHGGIENRCSVNIRWVDSEQVTEATAEALLGGADGILVPGGFGNRGIEGKIQAVRYARTKGIPYLGICLGMQLAVIEFARDVIGFADADSTELNPQTSHPVIALLPEQNGVTDLGGTLRLGSYPCVLEEGSLAEQLYGTREITERHRHRYEFNNEYRDILKSHGLRLSGLSPDGRIVEMVELPEHPYFIATQGHPEFKSRPNHAHPLFVGL
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain

phrase: LHDAYLSVAEALKHGGIENRCSVNIRWVDSEQVTEATAEALLGGADGILVPGGFGNRGIEGKIQAVRYARTKGIPYLGICLGMQLAVIEFARDVIGFADADSTELNPQTSHPVIALLPEQNGVTDLGGTLRLGSYPCVLEEGSLAEQLYGTREITERHRHRYEFNNEYRDILKSHGLRLSGLSPDGRIVEMVELPEHPYFIATQGHPEFKSRPNHAHPLFVGLV
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: KYVFVTGGVVSGLGKGITAASLGRLLKARGYRVTMQKLDPYINVDPGTMNPIQHGEVFVTEDGTETDLDLGHYERFIDENLGVHSNVTTGKIYWSVLHKERRGDYGGRTVQVIPHITNEIKSRFYRSDKEDCIAIIEVGGTVGDIESQPFLEAIRQFQMEVGRENAILIHVTLIPYLRASGELKTKPTQASVKQLQGMGIQPDILVCRSEVELGTDVKEKIALFCNVPVDHVLQNLDVEYLYEAPLAMEKEHLAEVVCRSLN
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: KYVFVTGGVVSGLGKGITAASLGRLLKARGYRVTMQKLDPYINVDPGTMNPIQHGEVFVTEDGTETDLDLGHYERFIDENLGVHSNVTTGKIYWSVLHKERRGDYGGRTVQVIPHITNEIKSRFYRSDKEDCIAIIEVGGTVGDIESQPFLEAIRQFQMEVGRENAILIHVTLIPYLRASGELKTKPTQASVKQLQGMGIQPDILVCRSEVELGTDVKEKIALFCNVPVDHVLQNLDVEYLYEAPLAMEKEHLAEVVC
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal
Protein sequence:
MSISTFNFQFYNYKLSPSSPGFGSTASRSSSSCISELEMDIDEDMSAQPTITSTPKPRFTSQLAVELAKTEPGNGISPLRPKLHTAQKRWSMELREKVLEMSKRNNGQEKPQTARQQEQRQPQEQPLQQEELQHQQQEPTVTDKINFFNKLTNTFESGFSKLMPQASSTNNRFIAMLRTARPQNVATTTANSSTANSFLGSDHSLSGSVTGQVPPPKPKRLSATTAQFATPHVPAMGVGKGGSQRKCSLRRKPSMDKSRATISRQSSSASVRTQNHAIMEDLSLVVPVRLRIAEYEQRISMSA

Annotated regions:
Protein sequence:
MVAVLTWALALLSAFATAQTQKGFWDYFSQSSGDKSKVARVQQQKLTWETTSLKDSLEQDLSNMDKFLEKLGPLSGQGREPPGLAHDPEGMRQQLQDELAEVRARLEPYMAEAHQQVGWNLEGLRRQLKPYTVELMEQVARRVQELQEQLRVVGEGTKAQLLGGVDEARGLLQELQTRVVQHTGRVRELFHPYAQRLVTGIGRHVQELHRSVAPHAAASSARLSRCVQTLSRKLTLKAEALHARIQQNLDQLREELSAFAGAGAGGAEEGANPDPQMLSQEVRQRLQAFRHDTFLQIADFTRAIDQETEEVQLQLAPPPPGHSAFAPEFLQADSSEARSKLQARLEDLWEDINDSLHDGGLSHLEEP

Annotated regions:
Protein sequence:
MDTLNVKGIRAYGYTGYFDAEQFLGQWFEVDLTIWIDLAKAGQSDDLNDTLNYADAVAIVQKLIRESKFKMIEKLAEAIADAILGTGKTQQVKVALTKCQAPIPDFDGDVTLEILRSR

Annotated regions:
phrase: MDTLNVKGIRAYGYTGYFDAEQFLGQWFEVDLTIWIDLAKAGQSDDLNDTLNYADAVAIVQKLIRESKFKMIEKLAEAIADAILGTGKTQQVKVALTKCQAPIPDFDGDVTLEILR
type: DOMAIN
name: FolB_dom
description: Dihydroneopterin aldolase/epimerase domain

phrase: LNVKGIRAYGYTGYFDAEQFLGQWFEVDLTIWIDLAKAGQSDDLNDTLNYADAVAIVQKLIRESKFKMIEKLAEAIADAILGTGKTQQVKVALTKCQAPIPDFDGDVTLEIL
type: DOMAIN
name: FolB_dom
description: Dihydroneopterin aldolase/epimerase domain

phrase: NVKGIRAYGYTGYFDAEQFLGQWFEVDLTIWIDLAKAGQSDDLNDTLNYADAVAIVQKLIRESKFKMIEKLAEAIADAILGTGKTQQVKVALTKCQAPIPDFDGDVTLE
type: DOMAIN
name: FolB_dom
description: Dihydroneopterin aldolase/epimerase domain

phrase: MDTLNVKGIRAYGYTGYFDAEQFLGQWFEVDLTIWIDLAKAGQSDDLNDTLNYADAVAIVQKLIRESKFKMIEKLAEAIADAILGTGKTQQVKVALTKCQAPIPDFDGDVTLEILR
type: DOMAIN
name: FolB_dom
description: Dihydroneopterin aldolase/epimerase domain
Protein sequence:
MPQQKLHVKSGDTVVVISGKDKGKRGKVLRTFPSEQKVLVEGVNMINKHTRATQENPQGGIVEQEGPVYADKVMVYCSKCQKPVRTGAKIDDKGNKSRICKKCGVEL

Annotated regions:
phrase: GDTVVVISGKDKGKRGK
type: CONSERVED_SITE
name: Ribosomal_uL24_CS
description: Large ribosomal subunit protein uL24, conserved site

phrase: HVKSGDTVVVISGKDKGKRGKVLRTFP
type: DOMAIN
name: KOW
description: KOW

phrase: GDTVVVISGKDKGKRGKVLRTFPSEQKVLV
type: DOMAIN
name: KOW
description: KOW

phrase: GDTVVVISGKDKGKRGKVLRTFPSEQKVLVEGVNMINKHTRATQENPQGGIVEQEGPVYADKVM
type: DOMAIN
name: Ribosomal_uL24_KOW
description: Large ribosomal subunit protein uL24, KOW domain
Protein sequence:
METGRPNLFFVGLMGAGKTTVGRTVARRLHYPFFDSDHELEAHCGVRIPVIFEHEGEEGFRDREAAMIRELTGRSGIVLATGGGAVLRPENRELLKSRGTVVYLRASPHDLWLRTRHDRNRPLLQTEDPKGKLEALYGARDPLYREVADFIIETGKPSVAQLANMVLMQLEMAGFRIDTAAASDQPANDTHS

Annotated regions:
phrase: RDREAAMIRELTGRSGIVLATGGGA
type: CONSERVED_SITE
name: Shikimate_kinase_CS
description: Shikimate kinase, conserved site