nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MPYIGSLKVNQFRNLADVDITPHSQFNFFFGQNGAGKTSILESIYYLSVGRSFRTHLPQRLIQDNTDRFLIFITLYNGTQFIPLGVERDCHGDRCLRINGETASSWSLAAKRLPLCSLSAMSHRFLLDGPRVRRQFLDWLMFHVEPSFFSIWQRLQRSLKQRNAALKAKLPLGEITHWDKMLVEDGERLHQLRQNVVTEFKPLFTQMLQQFLPAYPLIGHYFRGWSEKYSLMEQLQINLKQDLQRGYTQAGPQRADFRLTLGDLPAQDILSQGQQKLVTYALHFAQGLLLKEKTGISPIYLIDDLPAELDANKRDCVIDLVNCLESQVFISGIDPNEIRLPPHSTLFHVKHGKVAAL

Annotated regions:
phrase: YIGSLKVNQFRNLADVDITPHSQFNFFFGQNGAGKTSILESIYYLSVGRSFRTHLPQRLIQDNTDRFLIFITLYNGTQFIPLGVERDCHGDRCLRINGETASSWSLAAKRLPLCSLSAMSHRFLLDGPRVRRQFLDWLMFHVEPSFFSIWQRLQRSLKQRNAALKAKLPLGEITHWDKMLVEDGERLHQLRQNVVTEFKPLFTQMLQQFLPAYPLIGHYFRGWSEKYSLMEQLQINLKQDLQRGYTQAGPQRADFRLTLGDLPAQDILSQGQQKLVTYALHFAQGLLLKEKTGISPIYLIDDLPAELDANKRDCVIDLVNCLESQVFISGIDPN
type: DOMAIN
name: RecF/RecN/SMC_N
description: RecF/RecN/SMC, N-terminal

phrase: IYLIDDLPAELDANKRDC
type: CONSERVED_SITE
name: DNA-binding_RecF_CS
description: DNA-binding, RecF, conserved site

phrase: LSAMSHRFLLDGPRVRRQFL
type: CONSERVED_SITE
name: DNA-binding_RecF_CS
description: DNA-binding, RecF, conserved site
Protein sequence:
MTTGRLSMAEILEIFTATGQHPLKFTAYDGSTAGQDDATLGLDLRTPRGATYLATAPGELGLARAYVSGDLQAHGVHPGDPYELLKTLTERVDFKRPSARVLANVVRSIGVEHILPIAPPPQEARPRWRRMANGLLHSKTRDAEAIHHHYDVSNNFYEWVLGPSMTYTCAVFPNAEASLEQAQENKYRLIFEKLRLEPGDRLLDVGCGWGGMVRYAARRGVRVIGATLSAEQAKWGQKAVEDEGLSDLAQVRHSDYRDVAETGFDAVSSIGLTEHIGVKNYPFYFGFLKSKLRTGGLLLNHCITRHDNRSTSFAGGFTDRYVFPDGELTGSGRITTEIQQVGLEVLHEENFRHHYAMTLRDWCGNLVEHWDDAVAEVGLPTAKVWGLYMAASRVAFERNNLQLHHVLATKVDPRGDDSLPLRPWWQP

Annotated regions:
Protein sequence:
MAKRVQVVLNETVNKLGRMGQVVEVAPGYARNYLFPRGIAEPATPSALRRVERLQEKERQRLAALKSIAEKQKATLEKLATITISMPVGEKDMLFGSVTPQDVADAIQAITGETIDRREMILPEIRKLGTYTAEIKLHPEVTVKLNIQVVAD

Annotated regions:
phrase: GRMGQVVEVAPGYARNYLFPRGIAEPA
type: DOMAIN
name: Ribosomal_bL9_N
description: Large ribosomal subunit protein bL9, N-terminal

phrase: AEKQKATLEKLATITISMPVGEKDMLFGSVTPQDVADAIQAITGETIDRREMILPEIRKLGTYTAEIKLHPEVTVKLNIQVV
type: DOMAIN
name: Ribosomal_bL9_C
description: Large ribosomal subunit protein bL9, C-terminal

phrase: VQVVLNETVNKLGRMGQVVEVAPGYARNYLFPRGIAEPATPSALR
type: DOMAIN
name: Ribosomal_bL9_N
description: Large ribosomal subunit protein bL9, N-terminal
Protein sequence:
MMMGKEDLGLSLSLGFSQNHNPLQMNLNPNSSLSNNLQRLPWNQTFDPTSDLRKIDVNSFPSTVNCEEDTGVSSPNSTISSTISGKRSEREGISGTGVGSGDDHDEITPDRGYSRGTSDEEEDGGETSRKKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLQKEAMELRTLKLSPQFYGQMTPPTTLIMCPSCERVGGPSSSNHHHNHRPVSINPWVACAGQVAHGLNFEALRPRS

Annotated regions:
phrase: KQTEVDCEYLKRCVEKLTEENRRLQKEAMELRTLKLSPQFYGQ
type: DOMAIN
name: Leu_zip_homeo
description: Leucine zipper, homeobox-associated

phrase: GETSRKKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQVEVWFQNRRARTKL
type: DOMAIN
name: HD
description: Homeodomain

phrase: KQTEVDCEYLKRCVEKLTEENRRLQKEAMELRT
type: DOMAIN
name: Leu_zip_homeo
description: Leucine zipper, homeobox-associated

phrase: LAKKLNLTARQVEVWFQNRRART
type: CONSERVED_SITE
name: Homeobox_CS
description: Homeobox, conserved site

phrase: RKKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQVEVWFQNRRARTKLK
type: DOMAIN
name: HD
description: Homeodomain

phrase: RKKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQVEVWFQNRRART
type: DOMAIN
name: HD
description: Homeodomain

phrase: MMGKEDLGLSLSLGFSQNHNPLQMNLNPNSSLSNNLQRLPWNQTFDPTSDLRKIDVNSFPSTVNCEEDTGVSSPNSTISSTISGKRSER
type: DOMAIN
name: HD-ZIP_N
description: HD-ZIP protein, N-terminal

phrase: TSRKKLRLSKDQSAFLEETFKEHNTLNPKQKLALAKKLNLTARQVEVWFQNRRARTKLKQTE
type: DOMAIN
name: HD
description: Homeodomain
Protein sequence:
MPGLSCRFYQHKFPEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRIGRNECVVVIRVDKEKGYIDLSKRRVSPEEAIKCEDKFTKSKTVYSILRHVAEVLEYTKDEQLESLFQRTAWVFDDKYKRPGYGAYDAFKHAVSDPSILDSLDLNEDEREVLINNINRRLTPQAVKIRADIEVACYGYEGIDAVKEALRAGLNCSTETMPIKINLIAPPRYVMTTTTLERTEGLSVLNQAMAVIKEKIEEKRGVFNVQMEPKVVTDTDETELARQLERLERENAEVDGDDDAEEMEAKAED

Annotated regions:
phrase: PEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRIGRNECVVVIRVDKEKGYIDLSKR
type: DOMAIN
name: S1_IF2_alpha
description: IF2a, S1-like domain

phrase: EVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRIGRNECVVVIRVDKEKGYIDLSK
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: EDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRIGRNECVVVIRVDKEKGYIDLSK
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: PEVEDVVMVNVRSIAEMGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRIGRNECVVVIRVDKEKGYIDLSK
type: DOMAIN
name: S1_domain
description: S1 domain
Protein sequence:
MTSALFIPELGQLRMILALCFAVVQAVVPLLGAWPGDRLWMSLAQPARWGQFAFLLFAFGCLTYAFMTDDFSVAYVANNSNSALPWYYLFSAVWGAHEGSLLLWALILGGWTFAVSVFSRQLPQVMLARVLAVMGMISIGFLLFLIMTSNPFSRMLPQIPADGHDLNPLLQDIGLIVHPPMLYMGYVGFSVAFAFAIAALLGGRLDAAWARWSRPWTIVAWAFLGIGITLGSWWAYYELGWGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLTLLAAFLVRSGVLTSVHAFASDPERGVFILIFLLFVVGGSLTLFVRAPVVKSQVGFNLWSRETLLLGNNLVLVVAASMILLGTLYPLVLDALSGAKLSVGPPYFNALFIPLMGLLMVVMAVGVLVRWKDTPVKWLVGMLAPVLLGSVALAVVAGIAYGDFNWAVLATFLLAAWVLLAGVRDIFDKTRHKGLLKGLPTLTRSYWGMQIAHIGIAVCALGVVLSSQNSAERDLRLAPGESMDLAGYHFIFEGAKHFEGPNFTSDKGTVRVVRNGKEIAVLHPEKRLYTVQSSMMTEAGIDAGFTRDLYVALGEPLGDGAWAVRVHVKPFVRWIWFGGLLTGFGGLLAALDRRYRVKVKSRVREALGMGAAV

Annotated regions:
phrase: LIFLLFVVGGSLTLFVRAPVVKSQVGFNLWSRETLLLGNNLVLVVAASMILLGTLYPLVLDALSGAKLSVGPPYFNALFIPLMGLLMVVMAVGVLVRWKDTPVKWLVGMLAPVLLGSVALAVVAGIAYGDFNWAVLATFLLAAWVLLAGVRDIFDKTRHKGLLKGLPTLTRSYWGMQIAHIGIAVCALGVVLSSQNSAERDLRLAPGESMDLAGYHFIFEGAKHFEGPNFTSDKGTVRVVRNGKEIAVLHPEKRLYTVQSSMMTEAGIDAGFTRDLYVALGEPLGDGAWAVRVHVKPFVRWIWFGGLLTGFGGLLAALD
type: DOMAIN
name: CcmF_C
description: Cytochrome c-type biogenesis protein CcmF, C-terminal

phrase: WGAHEGSLLLWALILGGWTFAVSVFSRQLPQVMLARVLAVMGMISIGFLLFLIMTSNPFSRMLPQIPADGHDLNPLLQDIGLIVHPPMLYMGYVGFSVAFAFAIAALLGGRLDAAWARWSRPWTIVAWAFLGIGITLGSWWAYYELGWGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLTLLAAFLVR
type: DOMAIN
name: Cyt_c_assembly
description: Cytochrome c assembly protein
Protein sequence:
MKDTVSQPAGGRGATAPRPADAASPSCGSSPSADSVSVVLAGGGTAGHVEPAMAVADALVALDPRVRITALGTLRGLETRLVPQRGYHLELITAVPMPRKPGGDLARLPSRVWRAVREARDVLDDVDADVVVGFGGYVALPAYLAARGLPLPPRRRRRIPVVIHEANARAGLANRVGAHTADRVLSAVPDSGLRRAEVVGVPVRASIAALDRAVLRAEARAHFGFPDDARVLLVFGGSQGAVSLNRAVSGAAADLAAAGVCVLHAHGPQNVLELRRRAQGDPPYVAVPYLDRMELAYAAADLVICRAGAMTVAEVSAVGLPAIYVPLPIGNGEQRLNALPVVNAGGGMVVADAALTPELVARQVAGLLTDPARLAAMTAAAARVGHRDAAGQVARAALAVATGAGARTTT

Annotated regions:
phrase: VLLVFGGSQGAVSLNRAVSGAAADLAAAGVCVLHAHGPQNVLELRRRAQGDPPYVAVPYLDRMELAYAAADLVICRAGAMTVAEVSAVGLPAIYVPLPIGNGEQRLNALPVVNAGGGMVVADAALTPELVARQVAGLLTDPARLAAMTAAAARVGHRDAAG
type: DOMAIN
name: Glyco_trans_28_C
description: Glycosyl transferase, family 28, C-terminal

phrase: VVLAGGGTAGHVEPAMAVADALVALDPRVRITALGTLRGLETRLVPQRGYHLELITAVPMPRKPGGDLARLPSRVWRAVREARDVLDDVDADVVVGFGGYVALPAYLAARGLPLPPRRRRRIPVVIHEANARAGLANRVGAHTADRV
type: DOMAIN
name: GlycoTrans_28_N
description: Glycosyltransferase family 28, N-terminal domain
Protein sequence:
MLFDALLVLSFGGPEGPDQVMPFLENVTRGRGIPRERLASVAEHYLHFGGVSPINGINRALIGEIEAELGARGETLPVYFGNRNWDPYVEDAVTAMRDDGVRRAAVFATSAWGGYSSCTQYNEDIARGRAAAGDSAPQLVKLRHYFDHPLLVEMFAESIGVAAQSLPADLRDEARLLFTAHSIPVAADDRHGPNLYSRQVAYATRLVAAAAGYSEFDQVWQSRSGPPRIPWLEPDIGDHVAALAERGTKAVIICPIGFVADHIEVVWDLDSEVREQAADLGIAMARARTPNADRRYARLALDLVDELRGDRDPLRVAGVDPAPGCGYSVDGTTCADSPRCVARITG

Annotated regions:
phrase: EMFAESIGVAAQSLPADLRDEARLLFTAHSIPVAADDRHGPNLYSRQVAYATRLVAAAAGYSEFDQVWQSRSGPPRIPWLEPDIGDHVAALAERGTKAVIICPIGFVADHIEVVWDLDSEVREQAADLGIAMARARTP
type: DOMAIN
name: Ferrochelatase_C
description: Ferrochelatase, C-terminal

phrase: DALLVLSFGGPEGPDQVMPFLENVTRGRGIPRERLASVAEHYLHFGGVSPINGINRALIGEIEAELGARGETLPVYFGNRNWDPYVEDAVTAMRDDGVRRAAVFATSAWGGYSSCTQYNEDIARGRAAAGDSAPQLVKLRHYFD
type: DOMAIN
name: Ferrochelatase_N
description: Ferrochelatase, N-terminal

phrase: LLFTAHSIPVAADDRHGPNL
type: ACTIVE_SITE
name: Ferrochelatase_AS
description: Ferrochelatase, active site
Protein sequence:
MADWDDEKFEPGEVPADGVTDKWEGEDEDDDIKESWDDDDEDEKKEDEAKNTEAAAPKKKKTLKQILKEKEEQKLLEEKRKAEEKQKLEEEDKELTPEEQMAEKLRRQKIVEESDLLVAMDTFGVGTQEEASRTGLDSMIPSTKEEFTEYSKLLVEKLTKFETNPEYIPFLEATLREICVSLDPEDIKKLSSTLNMLQSEKLKAQKGKKAKSKATKKATLTGGAKMGRKDEMDYSYGDLGNEYDDFM

Annotated regions:
Protein sequence:
MDTLTASREKLAEKSKISVKNLDFFYGKFHALKSINLEIPEKKVTAFIGPSGCGKSTLLRIFNRMYELYPEQRAEGDVTFDGENLLTSKKDVALIRSKVGMVFQKPTPFPMSIYDNIAFGVKLFESLNASDMDERVEWALRKAALWGEVKDKLNQSGSSLSGGQQQRLCIARGIAIKPEVLLLDEPCSALDPISTAKVEELIAELKNDYTVVIVTHNMQQAARCSDYTAYMYLGDLVEFGATEDLFFKPKRKETEDYITGRFG

Annotated regions:
phrase: EKKVTAFIGPSGCGKSTLLRIFNRMYELYPEQRAEGDVTFDGENLLTSKKDVALIRSKVGMVFQKPTPFPMSIYDNIAFGVKLFESLNASDMDERVEWALRKAALWGEVKDKLNQSGSSLSGGQQQRLCIARGIAIKPEVLLLDEPCSALDPISTAKVEELIAELKNDYTVVIVTHNMQQAARCSDYTAYMYLGDLVEFGATEDLFFKPK
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LKSINLEIPEKKVTAFIGPSGCGKSTLLRIFNRMYELYPEQRAEGDVTFDGENLLTSKKDVALIRSKVGMVFQKPTPFPMSIYDNIAFGVKLFESLNASDMDERVEWALRKAALWGEVKDKLNQSGSSLSGGQQQRLCIARGIAIKPEVLLLDEP
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: ISVKNLDFFYGKFHALKSINLEIPEKKVTAFIGPSGCGKSTLLRIFNRMYELYPEQRAEGDVTFDGENLLTSKKDVALIRSKVGMVFQKPTPFPMSIYDNIAFGVKLFESLNASDMDERVEWALRKAALWGEVKDKLNQSGSSLSGGQQQRLCIARGIAIKPEVLLLDEPCSALDPISTAKVEELIAELKNDYTVVIVTHNMQQAARCSDYTAYMYLGDLVEFGATEDLFFKPKRKETEDY
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: LSGGQQQRLCIARG
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site
Protein sequence:
MSMPTIRAVRALTVRGGGADYHDQDAGHWIDDHIATPMSRYPEYRQSRQSFGINVLGTLVIEVEASDGTVGFAVTTGGEIGAFIVERHLARFIEGQRVTDIEKMWDQMFHATLYYGRKGVVLNAISGVDLALWDLLAKVRREPVHQLLGGKVRDELEFYATGARPDLAKEMGFIGGKLPLHHGPAEGEAGLRRNLDALADMRSRVGADFWLMLDCWMSLDVPYATRLAHEAHALGLKWIEECLPPDDYWGYAKLRRDVPRGMLVTTGEHEATRWGFRMLLEMECCDIIQPDVGWCGGLTELIRISALADARGVLVIPHGSSVYSYHFVATRHNSPFAEFLMMAPQADRVVPMFDPLLLDEPVPVGGRMKVPDTPGFGVRLNPDVRMQRPYEH

Annotated regions:
phrase: ELEFYATGARPDLAKEMGFIGGKLPLHHGPAEGEAGLRRNLDALADMRSRVGADFWLMLDCWMSLDVPYATRLAHEAHALGLKWIEECLPPDDYWGYAKLRRDV
type: DOMAIN
name: Mandelate_racemase_C
description: Mandelate racemase/muconate lactonizing enzyme, C-terminal

phrase: GFIGGKLPLHHGPAEGEAGLRRNLDALADMRSRVGADFWLMLDCWMSLDVPYATRLAHEAHALGLKWIEECLPPDDYWGYAKLRRDVPRGMLVTTGEHEATRWGFRMLLEMECCDIIQPDVGWCGGLTELIRISALADARGVLVIPHGSSVYSYHFVATRHNSPFAEFLMMAPQADRVVPMFDPLLLDEPVPVGGRMKVPDTPGFGVRLNP
type: DOMAIN
name: Enolase_C-like
description: Enolase C-terminal domain-like

phrase: LVIEVEASDGTVGFAVTTGGEIGAFIVERHLARFIEGQRVTDIEKMWDQMFHATLYYGRKGVVLNAISGVDLALWDLLAKVRREPVHQLL
type: DOMAIN
name: Mandelate_racemase_N_dom
description: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain

phrase: AISGVDLALWDLLAKVRREPVHQLL
type: CONSERVED_SITE
name: Mandel_Rmase/mucon_lact_enz_CS
description: Mandelate racemase/muconate lactonizing enzyme, conserved site
Protein sequence:
MRARLSVGMVQPQHFPVCFGRIAGWAGTPDPRVLWHSRHHLPRACALLLPRARWACRWLSLVSRAGLMQCHFQACPLGSRSRGDELEMIRPSVYRNVARQLHISLQSEPVVTDAFLAVAGHIFSAGITWGKVVSLYAVAAGLAVDCVRQAQPAMVHALVDCLGEFVRKTLATWLRRRGGWTDVLKCVVNTDPGLRSHWLLAALCSFGRFLKAAFFVLLPER

Annotated regions:
phrase: SRGDELEMIRPSVYRNVARQLHISLQSEPVVTDAFLAVAGHIFSAGITWGKVVSLYAVAAGLAVDCVRQAQPAMVHALVDCLGEFVRKTLATWLRRRGG
type: DOMAIN
name: Bcl-2_BH1-3
description: Bcl-2, Bcl-2 homology region 1-3

phrase: RSRGDELEMIRPSVYRNVARQLHISLQSEPVVTDAFLAVAGHIFSAGITWGKVVSLYAVAAGLAVDCVRQAQPAMVHALVDCLGEFVRKTLATWLRRRGG
type: DOMAIN
name: Bcl-2_BH1-3
description: Bcl-2, Bcl-2 homology region 1-3
Protein sequence:
MKVLGLDVGDKKIGVALSDELGLTAQGLTVIYRTSLKKDLEEIKKIIDLHHVTEVVIGYPRNMNGTAGPRAELVKRFARELYKFTGIKPVFWDERLSTVEAEKLLISGDISRRKRKKVIDKLAATLILSGYLNYKSKN

Annotated regions:
phrase: MKVLGLDVGDKKIGVALSDELGLTAQGLTVIYRTSLKKDLEEIKKIIDLHHVTEVVIGYPRNMNGTAGPRAELVKRFARELYKFTGIKPVFWDERLSTVE
type: DOMAIN
name: YqgF/RNaseH-like_dom
description: YqgF/RNase H-like domain
Protein sequence:
MNQIPMQYFNLAKENYSKYGLSVIQLIQIGKFYELWHEPDTSSKQQAYSQAELLVESSIRSRSLEVTPPIEQVASLLDMKIISLGKRSLLQMGFPVYSLTTHLSTLLDKGWTVIVIDELVTNKSGPKQRAVSQVYSPSCNLEDCPELPYVLSIYFSQDDLLGITLFSAMNGHSIIFPVSWTDRDKVTRLLISYHIREIVIWADSGVCSNILINKIYNLLIGWNLFPSEPNAKIEAMGEILTNLPCYLSYRYENNSKEWLLLHIYIGINTEWLNKNYQKYTLSKIFQSTWTENVNQANLISLLGVLQFIKDRNPNLIKNLQLPECYNSVVSPLNLILCNRAEYQLDLLSKRGKLGGLLNLIDYCSTAMGKRLLKFRLLNPITDYSELNLRYKDISIFKRLLNQKIFDNSELKCIKDLSSLHRQWAICASSDTTLPPKKLSQIYHSYLFACQLISKLTNNIQLPPLVGPQLKSLIKEIERIFQVDSLLGDFKDVIQPIGNLPNLFEQRQTLRAQLTEWAEQISNIVFQDTTSIKAEYFNKEGYAFSISSKKLTKLEHYMMNTSISNNSIIVLGKRGSHHIITSPTIHKVSIELNELEEQINIYVKQTYHQELKRLYFSYSELFLPLVNMISRLDVALSGAITAIKFNYVEPCLTLAKTQQTKGFIEAANLRHPLVEQLNTQEECIAHNISLEDKGMLVFSVNGAGKSTLLRAIGVNVILAQAGMYVAADSFKLRPYNYLITRILGGDDLYRGQGTFEVEMRDLSTILQLANYNSLILGDEICHGTEVNSGTAILAATIERLINAQTSFVLSTHLHQVCSLIDSPVRYYHLSVIQQENSALIYERKLKPGPGPSQYGIEVMGHIINDKKFYNSALKYRKLINWEPPSQGELTVFRPSKYNAQVFIDSCEICGAPADAVHHIKPKSEHKKLCNRKLNRRSNLVPVCSSCHLDIHRNKISILGWKRTPKHKKLYWVYTNESLDSGTK

Annotated regions:
phrase: KYNAQVFIDSCEICGAPADAVHHIKPKSEHKKLCNRKLNRRSNLVPVCSSCH
type: DOMAIN
name: HNH_nuc
description: HNH nuclease

phrase: LDLLSKRGKLGGLLNLIDYCSTAMGKRLLKFRLLNPITDYSELNLRYKDISIFKRLLNQKIFDNSELKCIKDLSSLHRQWAICASSDTTLPPKKLSQIYHSYLFACQLISKLTNNIQLPPLVGPQLKSLIKEIERIFQVDSLLGDFKDVIQPIGNLPNLFEQRQTLRAQLTEWAEQISNIVFQDTTSIKAEYFNKEGYAFSISSKKLTKLEHYMMNTSISNNSIIVLGKRGSHHIITSPTIHKVSIELNELEEQINIYVKQTYHQELKRLYFSYSELFLPLVNMISRLDVALSG
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: CEICGAPADAVHHIKPKSEHKKLCNRKLNRRSNLVPVCSSCHLDI
type: DOMAIN
name: HNH_nuc
description: HNH nuclease

phrase: LVFSVNGAGKSTLLRAIGVNVILAQAGMYVAADSFKLRPYNYLITRILGGDDLYRGQGTFEVEMRDLSTILQLANYNSLILGDEICHGTEVNSGTAILAATIERLINAQTSFVLSTHLHQVCSLIDSPVRYYHLSVIQQENSALIYERKLKPGPGPSQYGIEVMGHIINDK
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: CEICGAPADAVHHIKPKSEHKKLCNRKLNRRSNLVPVCSSCHLDIH
type: DOMAIN
name: HNH
description: HNH endonuclease

phrase: SLILGDEICHGTEVNS
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: GKLGGLLNLIDYCSTAMGKRLLKFRLLNPITDYSELNLRYKDISIFKRLLNQKIFDNSELKCIKDLSSLHRQWAICASSDTTLPPKKLSQIYHSYLFACQLISKLTNNIQLPPLVGPQLKSLIKEIERIFQVDSLLGDFKDVIQPIGNLPNLFEQRQTLRAQLTEWAEQISNIVFQDTTSIKAEYFNKEGYAFSISSKKLTKLEHYMMNTSISNNSIIVLGKRGSHHIITSPTIHKVSIELNELEEQINIYVKQTYHQELKRLYFSYSELFLPLVNMISRLDVALSGAITAIKFNYVEPCLTLAKTQQTKGFIEAANLRHPLVEQ
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: DKGMLVFSVNGAGKSTLLRAIGVNVILAQAGMYVAADSFKLRPYNYLITRILGGDDLYRGQGTFEVEMRDLSTILQLANYNSLILGDEICHGTEVNSGTAILAATIERLINAQTSFVLSTHLHQVCSLIDSPVRYYHLSVIQQENSALIYERKLKPGPGPSQYGIEVMGHIINDKKFYNSALKYR
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal
Protein sequence:
MSQSKDKKKFVGGGGGGGGNNSGGGGYGSPKHNNNNNNRNSSNNKSPHQSHHNQQHHQQQQQQQQQQQQQQQQPFDSLTAMKERTVFMSMSLVGQNVSVTLKNGDVYEGILHTTSTSTGSSGGGWGVALKMARKKDTNNRVITTLPLPLVIIEAKDFLQITATGVVLDHYRDSFMNRDQQSFITDTELSGFDGNLKERELTPWTPDPSVGESLDDFAANSEAKKPANWDQFETNEKLFGVRTTYEEEIYTTRLDRDSEFYKINQSVAEKKAQEIENEKSGNIHLLEERGFVEGADYDEEERYSSVVRKGLLPTSTTSTTTSPPTQNPTPSSSVYIPPSKRNNNNNTPSTPSVTSPPIVDKKHQQTHQDKKQTQQQQQQQQQQQQQQQQQQQQQQQQQQQQQTQPTTTATATASTSTSTTTTTNESPSSSSTSSTPSTPSTPKNITTTTATTSTNNTPTATNTNVNSPLGDRESPTISKLRLHQSTIDQDVMGSPRENLSPRSVAYTRYRQILSEPTNKSMNKSGSNISTTPVNGSGNVGPNGTPLLSSVHSDQAPKSPVPTIVSNHGLVKALSLELATPTVPEKFVNDFNNFKLKINNVDRGSETQGLKSFSSNLVIKSKSRPGSPLIGSGSPRPTPTQLSLSGSSTSTNTSTTSPPTTNTTTTTTTATNSTTPSTTEDDKSTTTPITTTILTENKSDDKEKEKEKEKEKVDEKEKEKEKEKSDEKDKDQSSTLVEKKDESSSSSNTTTTTTNTTNNNNNNTTTVTKLSKLKLNPNAKEFVPVVVNKPQPSFKSTTESNTDSVTPINEIYYDSMRKRQLQPESPDQVSLYWVDPFYPRYEEDPYAAAYQMRAHHHMVGHQPPPQLQFNPQFYSQQGHPQLQPHHHMVPPQLQQVPPGVNVHTMKPPGSLQPGGGGVVQPQGIVQPQGIVQPQGGVVQPSAGGAPKTMYQQQQQQQQQTGQPGGPMGVQRGGHLPPQQQPQQQQQQPPPQFIQGIPPGANLVISNGPPNQPFVFQGAHPPYAVPHPQYPMPPQGIQGGNKRFYQPPPQGYPQVQPMIIPQQGQVVSQNSPQQDSPSNRLNQQVPPYSYMTHPPRGYHPNENQYH

Annotated regions:
phrase: FGVRTTYEEEIYTTRLDRDSEFYKINQSVAEKKAQEIENEKSGNIHLLEERGFVEGADYDEEERYSSVV
type: DOMAIN
name: LsmAD_domain
description: LsmAD domain

phrase: ERTVFMSMSLVGQNVSVTLKNGDVYEGILHTTSTSTGSSGGGWGVALKMARKKDTNNRVITTLPLPLVIIEAKDFLQIT
type: DOMAIN
name: SM_dom_ATX
description: Ataxin 2, SM domain

phrase: RTVFMSMSLVGQNVSVTLKNGDVYEGILHTTSTSTGSSGGGWGVALKMARKKDTNNRVITTLPLPLVIIEAKDFLQITATGV
type: DOMAIN
name: Sm
description: Sm domain

phrase: KLKLNPNAKEFV
type: CONSERVED_SITE
name: PAM2_motif
description: PAM2 motif

phrase: FGVRTTYEEEIYTTRLDRDSEFYKINQSVAEKKAQEIENEKSGNIHLLEERGFVEGADYDEEERYSSVVR
type: DOMAIN
name: LsmAD_domain
description: LsmAD domain
Protein sequence:
SASAEGGALGAPRRGPALLQIDRHQIQAVERSAQALELRGLGVDVYDQEVLEQGVLQQVDDAIHEASRAAQLADAEKEYRSVLDDLTSCTTSLRQINKIIEQLSPQATTSRDINRKLDSVKRQKYNKEQQLKKITAKQKRLQAILGGAEVNIEMDLASLEEDAGEEPGPSCLGSMLMPAQETAWEQLVRTGQMTPFGTQIPQKQEKKPRRLMLNEASGFEKYLADQAKLSFERKKQASNKRVRRKARALATSELNPTQSENKQNERSAVPSKTEKRLKKHIRKLQRRALQFQGKVGLLKRAKPVEADGQIGDGASESEESEDLPEAEEEDQVAEANLPEGGADYELKPLLKGRKRQKKATVRELDEDFIPSSGEETEAGGAGRKAARWRDDGNEDYYQQRLRRWNKLRLQDKEKCLTLEDSSEDSDAEFDEGFKVPGFLFRKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRQGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHDTGSYTHKKEKLIRDIARYHGILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAITLACKQFRTPHRIILSGSPMQNNLRELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHEVYQNFIDSKEVYRILNGEMQIFSGLVALRKICNHPDLFSGGPRHLTGLPDGESEEDQFG

Annotated regions:
phrase: WELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRQGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHDTGSYTHKKEKLIRDIARYHGILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAITLACKQFRTPHRIILSGSPMQNNLRELWSLFDFVFP
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: LFRKLFKYQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRQGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHDTGSYTHKKEKLIRDIARYHGILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAITLACKQFRTPHRIILSGSPMQNNLRELWSLFDFVFPGKLGTLPV
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: YQQTGVRWLWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRQGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHDTGSYTHKKEKLIRDIARYHGILITSYSYIRLMQDDISRHDWHYVILDEGHKIRNPNAAITLACKQFRTPHRIILSGSPMQNNLRELWSLFDFVFPGKLGTLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQHEVYQNFIDSKEVYRILNGEMQIFSGLVALRKICNHPD
type: DOMAIN
name: SNF2_N
description: SNF2, N-terminal
Protein sequence:
MQDQAIVAILDGIRWLQEPPVWPDDATRSWLTERGSMTQRLEKHCGKIRVRRYREGFVTACIEAWEAALLPDCGRFWLREVVLYGHDRPWLTARTLVPAAAEAGPAQQVLSLGDVPLGQWLFRHRPPARDVIQFGRVGTLWARRARLRLTEGQPLLLTEAFLPDCPLYISGGDAPQQ

Annotated regions:
Protein sequence:
MAAPEPLRPRLCRLVRGEQGYGFHLHGEKGRRGQFIRRVEPGSPAEAAALRAGDRLVEVNGVNVEGETHHQVVQRIKAVEGETRLLVVDKETDEELRRRQLTCTEDMAQRGLPPAHDPWEPKPDWARAGSLSSDAGQKDVNGPPRELRPRLCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAAHSGLCAQDRLIEVNGQNVEGLRHAEVVARIKAKEDEARLLLVDPETDEYFKRLRVTPTEEHVEGPLPSPITNGTSPAQDASAWKRDPFQESGLHLSPTAAEAKEKARATRVNKRAPQMDWNRKREIFSNF

Annotated regions:
phrase: LRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAAHSGLCAQDRLIEVNGQNVEGLRHAEVVARIKAKEDEARL
type: DOMAIN
name: PDZ
description: PDZ domain

phrase: RGEQGYGFHLHGEKGRRGQFIRRVEPGSPAEAAALRAGDRLVEVNGVNVEGETHHQVVQRIKAVEGETRLL
type: DOMAIN
name: PDZ
description: PDZ domain

phrase: TDEYFKRLRVTPTEEHVEGPLPSPITNGTSP
type: DOMAIN
name: EBP50_C
description: EBP50, C-terminal

phrase: KRDPFQESGLHLSPTAAEAKEKARATRVNKRAPQMDWNRKREIFSN
type: DOMAIN
name: EBP50_C
description: EBP50, C-terminal

phrase: LCHLRKGPQGYGFNLHSDKSRPGQYIRSVDPGSPAAHSGLCAQDRLIEVNGQNVEGLRHAEVVARIKAKEDEARLLLVDP
type: DOMAIN
name: PDZ
description: PDZ domain

phrase: LCRLVRGEQGYGFHLHGEKGRRGQFIRRVEPGSPAEAAALRAGDRLVEVNGVNVEGETHHQVVQRIKAVEGETRLLVVDK
type: DOMAIN
name: PDZ
description: PDZ domain

phrase: QGYGFHLHGEKGRRGQFIRRVEPGSPAEAAALRAGDRLVEVNGVNVEGETHHQVVQRIKAVEGETRLLVVDK
type: DOMAIN
name: PDZ
description: PDZ domain

phrase: QGYGFNLHSDKSRPGQYIRSVDPGSPAAHSGLCAQDRLIEVNGQNVEGLRHAEVVARIKAKEDEARLLLVDP
type: DOMAIN
name: PDZ
description: PDZ domain
Protein sequence:
MSNVQTSADRVPHDLSHLVFEAGKIGRLKTISWTPVVAGDSFECDMVGAIRLSPLRRGLAVDSRVDIFSFYIPHRHIYGQQWINFMKDGVNASPLPPVTCSSGWDSAAYLGTIPSSTLKVPKFLHQGYLNIYNNYFKPPWSDDLTYANPSNMPSEDYKWGVRVANLKSIWTAPLPPDTRTSENMTTGTSTIDIMGLQAAYAKLHTEQERDYFMTRYRDIMKEFGGHTSYDGDNRPLLLMRSEFWASGYDVDGTDQSSLGQFSGRVQQTFNHKVPRFYVPEHGVIMTLAVTRFPPTHEMEMHYLVGKENLTYTDIACDPALMANLPPREVSLKEFFHSSPDSAKFKIAEGQWYRTQPDRVAFPYNALDGFPFYSALPSTELKDRVLVNTNNYDEIFQSMQLAHWNMQTKFNINVYRHMPTTRDSIMTS

Annotated regions:
Protein sequence:
MRVALGIEYCGTGFHGWQSQAGGGTVQDALEAALGEVAGVPVGVLCAGRTDAGVHATHQVAHFDAPVDRPLTAWVRGVNSHLPEGVAVRWAQPVAEDFHARFSARGRRYRYLLLNRPQRPGLWQGRVGWFHWPLELEAMQEACLRLLGEHDFSAFRAANCQAKSPVKHMSRAEVRQCGNMFVFDFEASAFLHHMVRNLVGTLVYIGKGTQQPDWIEALLQTKDRKLAAPTFSPDGLYFRGPVYEPHWGLPDPNDDFLDGMLK

Annotated regions:
phrase: EYCGTGFHGWQSQAGGGTVQDALEAALGEVAGVPVGVLCAGRTDAGVHATHQVAHFDAPVDRPLTAWVRGVNSHLPEGVAVRWAQPVAEDFHARF
type: DOMAIN
name: PsdUridine_synth_TruA_a/b_dom
description: Pseudouridine synthase I, TruA, alpha/beta domain

phrase: ACLRLLGEHDFSAFRAANCQAKSPVKHMSRAEVRQCGNMFVFDFEASAFLHHMVRNLVGTLVYIGKGTQQPDWIEALLQTKDRKLAAPTFSPDGLYF
type: DOMAIN
name: PsdUridine_synth_TruA_a/b_dom
description: Pseudouridine synthase I, TruA, alpha/beta domain
Protein sequence:
MKKKNIYSIRKLGVGIASVTLGTLLISGGVTPAANAAQHDEAQQNAFYQVLNMPNLNADQRNGFIQSLKDDPSQSANVLGEAQKLNDSQAPKADAQQNKFNKDQQSAFYEILNMPNLNEEQRNGFIQSLKDDPSQSTNVLGEAKKLNESQAPKADNNFNKEQQNAFYEILNMPNLNEEQRNGFIQSLKDDPSQSANLLAEAKKLNESQAPKADNKFNKEQQNAFYEILHLPNLNEEQRNGFIQSLKDDPSQSANLLAEAKKLNDAQAPKADNKFNKEQQNAFYEILHLPNLTEEQRNGFIQSLKDDPSVSKEILAEAKKLNDAQAPKEEDNNKPGKEDGNKPGKEDGNKPGKEDNKKPGKEDGNKPGKEDNKKPGKEDGNKPGKEDGNKPGKEDGNKPGKEDGNKPGKEDGNGVHVVKPGDTVNDIAKANGTTADKIAADNKLADKNMIKPGQELVVDKKQPANHADANKAQALPETGEENPFIGTTVFGGLSLALGAALLAGRRREL

Annotated regions:
phrase: DNKFNKEQQNAFYEILHLPNLTEEQRNGFIQSLKDDPSVSKEILAEAKKLND
type: DOMAIN
name: Protein_A_Ig-bd
description: Protein A, Ig-binding domain

phrase: DNNFNKEQQNAFYEILNMPNLNEEQRNGFIQSLKDDPSQSANLLAEAKKLNE
type: DOMAIN
name: Protein_A_Ig-bd
description: Protein A, Ig-binding domain

phrase: QNKFNKDQQSAFYEILNMPNLNEEQRNGFIQSLKDDPSQSTNVLGEAKKLNE
type: DOMAIN
name: Protein_A_Ig-bd
description: Protein A, Ig-binding domain

phrase: AQHDEAQQNAFYQVLNMPNLNADQRNGFIQSLKDDPSQSANVLGEAQKLND
type: DOMAIN
name: Protein_A_Ig-bd
description: Protein A, Ig-binding domain

phrase: DNKFNKEQQNAFYEILHLPNLNEEQRNGFIQSLKDDPSQSANLLAEAKKLND
type: DOMAIN
name: Protein_A_Ig-bd
description: Protein A, Ig-binding domain

phrase: GVHVVKPGDTVNDIAKANGTTADKIAADNKLADKNMIKPGQELV
type: DOMAIN
name: LysM_dom
description: LysM domain

phrase: VHVVKPGDTVNDIAKANGTTADKIAADNKLADKNMIKPGQELVV
type: DOMAIN
name: LysM_dom
description: LysM domain

phrase: DANKAQALPETGEENPFIGTTVFGGLSLALGAALLAGRR
type: DOMAIN
name: LPXTG_anchor
description: LPXTG cell wall anchor domain

phrase: KKKNIYSIRKLGVGIASVTLGTLL
type: DOMAIN
name: YSIRK_signal_dom
description: YSIRK Gram-positive signal peptide

phrase: PGKEDGN
type: REPEAT
name: Octapeptide
description: Octapeptide repeat

phrase: PGKEDGN
type: REPEAT
name: Octapeptide
description: Octapeptide repeat

phrase: PGKEDGN
type: REPEAT
name: Octapeptide
description: Octapeptide repeat

phrase: PGKEDGN
type: REPEAT
name: Octapeptide
description: Octapeptide repeat

phrase: PGKEDNK
type: REPEAT
name: Octapeptide
description: Octapeptide repeat

phrase: PGKEDGN
type: REPEAT
name: Octapeptide
description: Octapeptide repeat

phrase: PGKEDGN
type: REPEAT
name: Octapeptide
description: Octapeptide repeat

phrase: PGKEDNK
type: REPEAT
name: Octapeptide
description: Octapeptide repeat

phrase: PGKEDGN
type: REPEAT
name: Octapeptide
description: Octapeptide repeat

phrase: PKEEDNN
type: REPEAT
name: Octapeptide
description: Octapeptide repeat

phrase: PGKEDGN
type: REPEAT
name: Octapeptide
description: Octapeptide repeat

phrase: HVVKPGDTVNDIAKANGTTADKIAADNKLADKNMIKPGQELV
type: DOMAIN
name: LysM_dom
description: LysM domain

phrase: LPETGEENPFIGTTVFGGLSLALGAALLAGRRRE
type: DOMAIN
name: LPXTG_anchor
description: LPXTG cell wall anchor domain

phrase: KKNIYSIRKLGVGIASVTLGTLLISGGVTPAAN
type: DOMAIN
name: YSIRK_signal_dom
description: YSIRK Gram-positive signal peptide

phrase: VHVVKPGDTVNDIAKANGTTADKIAADNKLADKNMIKPGQELV
type: DOMAIN
name: LysM_dom
description: LysM domain