nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MATFAKPENALKRAEELIHVGQKQSALQALHDLITSKRYRSWQKPLEKIMMKYVELCVDLRKGRFAKDGLIQYRIVCQQVNVSSLEDVIKHFMQLSNEKAEQAKSQVEALEDALDVEDLEADKRPEDLMLSFVSGEKGKDRSDKEVVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRSCVRSIRNHLANLNKYRDQRDRPDLTAPESLQLYLDTRVEQLKVATELSLWQEAFRSVEDIHGLMTMVKKMPKPSILVVYYAKLTEIFWISDSHLYHAYAWLKLFNLQKSYNKNLSQKDLQLIASSVLLAALSVSPYDKKYGAFETENEKERNMRLSNLVNFSLDNKRENREMPSRPYLLSELASKGVLSCASQEVRDLYNLLEHRFLPLDLASKVQPLLLKISKIGGKLSSASSVPEVKLSQYISALEKLTTLRVLQQASCIFKSIKIDMLSRMIPFFDFSVVEKISVDAAKQNFVAIKVDHLSGVVQFGTVDIESDGLSDHLSVLADSLNKARIHICPPVKKPSKLGESLISLAAIVENEHKRLLARKSIIEKRKEELERQILEKEKEEEKKRMSSQKKTVDEERVRLLNEQRQREQDRIRREIEEKNKAEAKKMLEDLNKAGKKHVVVEGELTKEAYMELARNEQLKERHEMEKKLQKFAKTMDYLERAKRQEEAPLIEQAFQKRLEEEKILHEQEQLREIELSKQHHASDLQEKNRLSRMLEHKNALQERIIQERAAEFGRLKKERDE

Annotated regions:
phrase: QYISALEKLTTLRVLQQASCIFKSIKIDMLSRMIPFFDFSVVEKISVDAAKQNFVAIKVDHLSGVVQFGTVDIESDGLSDHLSV
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain

phrase: VKLSQYISALEKLTTLRVLQQASCIFKSIKIDMLSRMIPFFDFSVVEKISVDAAKQNFVAIKVDHLSGVVQF
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain

phrase: LQLIASSVLLAALSVSPYDKKYGAFETENEKERNMRLSNLVNFSLDNKRENREMPSRPYLLSELASKGVLSCASQEVRDLYNLLEHRFLPLDLASKVQPLLLKISKIGGKLSSASSVPEVKLSQYISALEKLTTLRVLQQASCIFKSIKIDMLSRMIPFFDFSVVEKISVDAAKQNFVAIKVDHLSGVVQFGTVD
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain

phrase: ENALKRAEELIHVGQKQSALQALHDLITSKRYRSWQKPLEKIMMKYVELCVDLRKGRFAKDGLIQYRIVCQQVNVSSLEDVIKHFMQLSNEKAEQAKSQVEALEDALDVEDLEADKRPEDLMLSFVSGEKGKDRSDKEVVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRSCVRSIRNHLANLNKYRDQRDRPDLTAPESLQLYLDTRVEQLKVATELSLWQEAFRSVEDIHGLMTMVKKMPKPSILVVYYAKLTEIFWISDSHLYHAYAWLKLFNLQKSYNKNLSQKDLQLIASSVLLAALSVSPYDKKYGAFETENEKERNMRLSNLVNFSLDNKRENREMPSRPYLLSELASKGVLSCASQEVRDLYNLLEHRFL
type: DOMAIN
name: eIF3a_PCI_TPR-like
description: eIF3a, PCI domain, TPR-like region
Protein sequence:
MLCVNVELQERRYPILIGSGLLQDERSYPIKRGDRVMIVTNPTVAQFYLDTVIYALEKRGCVVDHVLLPDGEKYKTLESLNLIFTALLQDNHGRDTTIIALGGGVIGDVAGFVAASYQRGVRLIQMPTTLLSQVDSSVGGKTAVNHELGKNMIGAFYQPSMVIIDTLTLNTLPKREVNAGLAEVIKYGAILDYEFFEWLEQHIDELVALHPEALQHCISRCCQIKADVVARDETEKGDRALLNLGHTFGHAIETHLGYGNWLHGEAVSTGMMMAAVLSEELGDISIADVSRLEKLLARANLPTVSPDTMQPEDYLPHMMRDKKVLSGKLRLVLLKSLGQAYVANDTDHTLVLNAIRRCTQTD

Annotated regions:
phrase: VLLPDGEKYKTLESLNLIFTALLQDNHGRDTTIIALGGGVIGDVAGFVAASYQRGVRLIQMPTTLLSQVDSSVGGKTAVNHELGKNMIGAFYQPSMVIIDTLTLNTLPKREV
type: DOMAIN
name: DHQS/DOIS_N
description: 3-dehydroquinate synthase, N-terminal domain

phrase: GLAEVIKYGAILDYEFFEWLEQHIDELVALHPEALQHCISRCCQIKADVVARDETEKGDRALLNLGHTFGHAIETHLGYGNWLHGEAVSTGMMMAAVLSEELGDISIADVSRLEKLLARANLPTVSPDTMQPEDYLPHMMRDKK
type: DOMAIN
name: DHQS_C
description: 3-dehydroquinate synthase, C-terminal domain
Protein sequence:
MYRSTKGASKARRDQINAEIRNLKELLPLAEADKVRLSYLHIMSLACIYTRKGVFFAGGTPLAGPTGLLSAQELEDIVAALPGFLLVFTAEGKLLYLSESVSEHLGHSMVDLVAQGDSIYDIIDPADHLTVRQQLTMPSALDADRLFRCRFNTSKSLRRQSSGNKLVLIRGRFHAHPPGAYWAGNPVFTAFCAPLEPRPRPGPGPGPGPGPASLFLAMFQSRHAKDLALLDVSESVLIYLGFERSELLCKSWYGLLHPEDLAQASSQHYRLLAESGDIQAEMVVRLQAKHGGWTWIYCMLYSEGPEGPFTANNYPISDTEAWSLRQQLNSEDTQAAYVLGTPAVLPSFSENVFSQEQCSNPLFTPSLGTPRSASFPRAPELGVISTPEELPQPSKELDFSYLPFPARPEPSLQADLSKDLVCTPPYTPHQPGGCAFLFSLHEPFQTHLPPPSSSLQEQLTPSTVTFSEQLTPSSATFPDPLTSSLQGQLTESSARSFEDQLTPCTSSFPDQLLPSTATFPEPLGSPAHEQLTPPSTAFQAHLNSPSQTFPEQLSPNPTKTYFAQEGCSFLYEKLPPSPSSPGNGDCTLLALAQLRGPLSVDVPLVPEGLLTPEASPVKQSFFHYTEKEQNEIDRLIQQISQLAQGVDRPFSAEAGTGGLEPLGGLEPLNPNLSLSGAGPPVLSLDLKPWKCQELDFLVDPDNLFLEETPVEDIFMDLSTPDPNGEWGSGDPEAEVPGGTLSPCNNLSPEDHSFLEDLATYETAFETGVSTFPYEGFADELHQLQSQVQDSFHEDGSGGEPTF

Annotated regions:
phrase: QELEDIVAALPGFLLVFTAEGKLLYLSESVSEHLGHSMVDLVAQGDSIYDIIDPADHLTVRQQLTMPS
type: DOMAIN
name: PAS
description: PAS domain

phrase: SLFLAMFQSRHAKDLALLDVSESVLIYLGFERSELLCKSWYGLLHPEDLAQASSQHYRLL
type: DOMAIN
name: PAS
description: PAS domain

phrase: MYRSTKGASKARRDQINAEIRNLKELLPLAEADKVRLSYLHIMSLACIYTRK
type: DOMAIN
name: bHLH_NPAS4
description: NPAS4, bHLH domain

phrase: LDVSESVLIYLGFERSELLCKSWYGLLHPEDLAQASSQHYRLLAESGDIQAEMVVRLQAKHGGWTWIY
type: DOMAIN
name: PAS_fold_3
description: PAS fold-3

phrase: LPGFLLVFTAEGKLLYLSESVSEHLGHSMVDLVAQGDSIYDIIDPADHLTVRQQ
type: DOMAIN
name: PAS
description: PAS domain

phrase: MYRSTKGASKARRDQINAEIRNLKELLPLAEADKVRLSYLHIMSLACIYTRK
type: DOMAIN
name: bHLH_dom
description: Myc-type, basic helix-loop-helix (bHLH) domain

phrase: LAMFQSRHAKDLALLDVSESVLIYLGFERSELLCKSWYGLLHPEDLAQASSQHYRLLAESGDIQAEMVVRLQAKHGGWTW
type: DOMAIN
name: PAS
description: PAS domain

phrase: LLDVSESVLIYLGFERSELLCKSWYGLLHPEDLAQASSQHYRLLAE
type: DOMAIN
name: PAS
description: PAS domain

phrase: SAQELEDIVAALPGFLLVFTAEGKLLYLSESVSEHLGHSMVDLVAQGDSIYDIIDPADHLTVRQQLTMPSALDA
type: DOMAIN
name: PAS
description: PAS domain
Protein sequence:
MFSFNLLTQYIIMRSLKKFFVKTYGCQMNELDSEIMIGQLENRGLTRSHDENDADLLIFNTCSIRDLAERKVMGKLGKLGLTKQSQAIIGVTGCMANAKKDSLFQKLPHIDFVLGTNNIHDLNHVLDEVLASGKQSIRTDDHFEFELDYLNAKREDQIKAYVSIIRGCDKFCTYCVVPYTRGSEVSRAPENILEECRHLVNQGYKEITLLGQNVNSYGKDKLEWKCLFHDLLYQLDKIPGLERVRFMTSHPVDISKELMEAIRDLKTLCEFVHFPLQAGSNRVLKKMHRIYTVEQYLEKVQMLKEIVPNVALGTDIIVGFPTETEEEFQETYRLLKEIEYSVAFLFSYSPRKGTPAMRWRDDVPEEVKQDRLQRLLQLQDTIYMKHRQAFLGQTVEVLVERRNFKDDRLVKGRTRCWKNVLFTGGDELVGTMQQVKIHGYSHQTLLGDLQ

Annotated regions:
phrase: KFFVKTYGCQMNELDSEIMIGQLENRGLTRSHDENDADLLIFNTCSIRDLAERKVMGKLGKLGLTKQSQAIIGVTGCMANAKKDSLFQKLPHIDFVL
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: IKAYVSIIRGCDKFCTYCVVPYTRGSEVSRAPENILEECRHLVNQGYKEITLLGQNVNSYGKDKLEWKCLFHDLLYQLDKIPGLERVRFMTSHPVDISKELMEAIRDLKTLCEFVHFPLQAGSNRVLKKMHRIYTVEQYLEKVQMLKEIVPNVALGTDIIVGFPTETEEEFQETYRLLKEIEYSVAFLFSYSPRKGTPAMRWRDDVPEEVKQDRLQRLL
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: VSIIRGCDKFCTYCVVPYTR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: KKFFVKTYGCQMNELDSEIMIGQLENRGLTRSHDENDADLLIFNTCSIRDLAERKVMGKLGKLGLTKQSQAIIGVTGCMANAKKDSLFQKLPHIDFVLGTNNIHDLNHVLDEVL
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: QAFLGQTVEVLVERRNFKDDRLVKGRTRCWKNVLFTGGDELVGTMQQVKIHGYSHQTLLGDL
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: VSIIRGCDKFCTYCVVPYTRGSEVSRAPENILEECRHLVNQGYKEITLLGQNVNSYGKDKLEWKCLFHDLLYQLDKIPGLERVRFMTSHPVDISKELMEAIRDLKTLCEFVHFPLQAGSNRVLKKMHRIYTVEQYLEKVQMLKEIVPNVALGTDIIVGFPTETEEEFQETYRL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: REDQIKAYVSIIRGCDKFCTYCVVPYTRGSEVSRAPENILEECRHLVNQGYKEITLLGQNVNSYGKDKLEWKCLFHDLLYQLDKIPGLERVRFMTSHPVDISKELMEAIRDLKTLCEFVHFPLQAGSNRVLKKMHRIYTVEQYLEKVQMLKEIVPNVALGTDIIVGFPTETEEEFQETYRLLKEIEYSVAFLFSYSPRKGTPAMRWRDDVPEEVKQDRLQRLLQLQDTIYM
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MADESPAVWVRVEALDTVFHEAAQALAGRLGLPFGGEARFALQLGEQGLQLAELGAQAPGPVRVDFVEGASAHRRLFGGGSGQMIAKAVGVQPGVRPRVLDATAGLGRDAFVLACLGCEVTLIERQPPIAALLEDGLARAVRDPEVAPIVARMRLLPGDAIARMRQWPDEPPQVIYLDPMFPHRDKSALVKKEMRLFRPLVGDDPDAPALLEAALALASHRVVVKRPRKAPSVAGPRPGYSLEGKSSRYDIYARQSLKG

Annotated regions:
Protein sequence:
MEFLQNIKKNYDEWTRITPQGLLYDRALFWLFVILLLIGLVAVTSASIPYSSRLFNDPFYFAKRDAIYVLLSLLTCYISLQISSSQWEKWHAKIFLFSVILLLLVPFIGTSVNGAKRWISLGILNFQPAEFAKLALTCFLASYFTRRYDEVRSRHVSIFKPFIVMLVLGCFLLLQPDLGSTVVLFIIMSGMLFIVGAKILQFVGLIALGGILFVWLVLTASYRLKRFIGFLEPFKEPYGTGFQLTNSLIAFGRGEITGEGLGNSIQKLDYLPEAHTDFIMAIIGEEFGFIGILIVILLLGLLIFRAMKIGRESLMLEQRFRGFFALGIGFWIFFQGFVNLGMALGMLPTKGLTFPLVSYGGSSIIIMSATIGILLRIDHENRLFRIGQARLRDD

Annotated regions:
phrase: NLGMALGMLPTKGLTFPLVSYGGS
type: CONSERVED_SITE
name: Cell_cycle_FtsW-rel_CS
description: Cell cycle, FtsW / RodA / SpoVE, conserved site
Protein sequence:
MKSHREMLRGIQREAGITQRWIGKESLDRRVMEAMKAVPRHEFVPDEQRPYAYDDAPLAIGCGQTISQPYIVALMTDLLDSTPDDIILEVGTGSGYQAAVLSRLVKKVYTIETIEELAQQAEARLERLGYSNVEVQTADGYFGWPEQAPFDGIMVTAAAPSIPKPLIDQLKPEARLVLPLGAGSPQELMVVTKKENDEIDIHRVLGVSFVPLTGKHEVP

Annotated regions:
Protein sequence:
MKQYLDLMRHVREHGTFKSDRTGTGTYSVFGYQMRFDLAEGFPLVTTKKCHLKSIIHELLWFLQGDTNIKYLKENGVRIWDEWADENGELGPVYGYQWRSWPAPNGESIDQIANLLAMIKKNPDSRRLIVSAWNPALVEQMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTLMVAQVCDLEPGEFIWSGGDCHLYANHLEQADLQLTREPLPLPTMKLNPEVKDLFAFRFEDFELVGYEAHPHIKAPVAV

Annotated regions:
phrase: KQYLDLMRHVREHGTFKSDRTGTGTYSVFGYQMRFDLAEGFPLVTTKKCHLKSIIHELLWFLQGDTNIKYLKENGVRIWDEWADENGELGPVYGYQWRSWPAPNGESIDQIANLLAMIKKNPDSRRLIVSAWNPALVEQMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTLMVAQVCDLEPGEFIWSGGDCHLYANHLEQADLQLTREPLPLPTMKLNPEVKDLFAFRFEDFELVGYEAHPHIKAPVA
type: DOMAIN
name: Thymidate_synth/dCMP_Mease_dom
description: Thymidylate synthase/dCMP hydroxymethylase domain

phrase: QYLDLMRHVREHGTFKSDRTGTGTYSVFGYQMRFDLAEGFPLVTTKKCHLKSIIHELLWFLQGDTNIKYLKENGVRIWDEWADENGELGPVYGYQWRSWPAPNGESIDQIANLLAMIKKNPDSRRLIVSAWNPALVEQMALPPCHALFQFYVADGKLSCQLYQRSADIFLGVPFNIASYALLTLMVAQVCDLEPGEFIWSGGDCHLYANHLEQ
type: DOMAIN
name: Thymidate_synth/dCMP_Mease_dom
description: Thymidylate synthase/dCMP hydroxymethylase domain

phrase: RRLIVSAWNPALVEQMALPPCHALFQFY
type: ACTIVE_SITE
name: Thymidylate_synthase_AS
description: Thymidylate synthase, active site
Protein sequence:
MPEKKGSADAKVLHCSFCNKSQHEVRKLIAGPSVFICDECIDLCNDIIREEAQATARAAIRSELPTPVEIKSFLDQYVIGQTGPKRMLAVAVYNHYKRIRHGEIKGDEVELSKSNIMLIGPTGSGKTLLAQTLARMLNVPFVMADATTLTEAGYVGEDVENIIQKLLQNCNYDVEKAQRAIIYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPNQDFVQVDTTNILFIVGGAFDGLEKVIRDRTEKSGIGFSAAVRAKSERGVGELFGEAEPEDLIKFGLIPELVGRLPVVATLDELDEAALVQILTEPKNALIKQFQKLFAMESAELDIRPDALHAIARKALQRKTGARGLRSILESALLDTMYDLPTAGNIRRVVVDANVIEGDGKPLLIYADEVAGSDESAQGEVRDAAA

Annotated regions:
phrase: SKSNIMLIGPTGSGKTLLAQTLARMLNVPFVMADATTLTEAGYVGEDVENIIQKLLQNCNYDVEKAQRAIIYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPNQDFVQVDTTNILFIVGGAFDGLEKVIRDRTEKSGIGFSAAVRAKSERGVGELFGEAEPEDLIKFGLIPELVGRLPVVATLDELDEAALVQILTEPKNA
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LDEAALVQILTEPKNALIKQFQKLFAMESAELDIRPDALHAIARKALQRKTGARGLRSILESALLDTMYDLPTAGNI
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal

phrase: VLHCSFCNKSQHEVRKLIAGPSVFICDECIDLCNDIIRE
type: DOMAIN
name: Znf_CppX_C4
description: Zinc finger, ClpX C4-type

phrase: LDEAALVQILTEPKNALIKQFQKLFAMESAELDIRPDALHAIARKALQRKTGARGLRSILESALLDTMYDLPTAGNIRRVVVDANVIEGDGKPLL
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal

phrase: EKKGSADAKVLHCSFCNKSQHEVRKLIAGPSVFICDECIDLCNDIIREEAQAT
type: DOMAIN
name: Znf_CppX_C4
description: Zinc finger, ClpX C4-type

phrase: KSNIMLIGPTGSGKTLLAQTLARMLNVPFVMADATTLTEAGYVGEDVENIIQKLLQNCNYDVEKAQRAIIYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPNQDFVQVDTTNILFIVGGAFDGLEKVIRDRTEKSGIGFSAAVRAKSERGVGELFGEAEPEDLIKFGLIPELVGRLP
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: HCSFCNKSQHEVRKLIAGPSVFICDECIDLCNDIIR
type: DOMAIN
name: Znf_CppX_C4
description: Zinc finger, ClpX C4-type
Protein sequence:
MEGKRETRGEAGFVLKRKTVVLGVTGGIACYKAAALASKLTQRGYNVEVVLTRNATEFIGPHTFESLTHNRAMVDTFDRNFQSHVEHVALADKADALIVAPATANIIAKAAHGIADDMLSTTILACDCPKLVAPAMNTRMYENPVTQDNLAALRRYGWQVIEPAVGRLACGAVGAGKMPEPEDLLEAVDHAVRYEKDLAGVKLLVTAGPTQEAVDPVRFLTNHSSGKMGYEIARGAAARGAEVTLVTGPTALKKPAFVDCVDVVTAREMFDAVTSRAGDMDIIVKAAAVADYRPAHPAENKIKKQSGEAMILELERTDDILLWLGEHRRPGQLLCGFSMETENLLENSRRKLQRKHLDLIAANSLTEEGAGFGGSTNVLTLISPEGEITLPLMSKEDAAHRLLDKIAEIRRRPYE

Annotated regions:
phrase: KTVVLGVTGGIACYKAAALASKLTQRGYNVEVVLTRNATEFIGPHTFESLTHNRAMVDTFDRNFQSHVEHVALADKADALIVAPATANIIAKAAHGIADDMLSTTILACDCPKLVAPAMNTRMYENPVTQDNLAALRRYGWQVIEPAVGRLACGAVGAGKMPEPEDLLEA
type: DOMAIN
name: Flavoprotein
description: Flavoprotein

phrase: LAGVKLLVTAGPTQEAVDPVRFLTNHSSGKMGYEIARGAAARGAEVTLVTGPTALKKPAFVDCVDVVTAREMFDAVTSRAGDMDIIVKAAAVADYRPAHPAENKIKKQSGEAMILELERTDDILLWLGEHRRPGQLLCGFSMETENLLENSRRKLQRKHLDLIAANSLTEEGAGFGGSTNVLTL
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal
Protein sequence:
MDIKRTILWVIFSMSLVLLYDNWQRSQGHASMFFPSTTQQAASAPAASGAAAQGDVPKANVAPGAAGTAAPAAPQAAAQPTGEKVVVTTDTVRAEIDTAGGIVSRLELLKEHEKDGKPVVLFERDNVRTYMARSGLIGGDLPNHTTVFTAAPGPRTLDGAEQLEVALTAEKNGVKLVKTYVFRKGSYVVDTKFAVTNAGAAPVSPTLYLELARDGSKVEQSQFYSTFTGPAVYTDADKYHKIDFEDIAKGKATVPAAANNGWVAMVQHYFASAWIPQTGKEHSFYVQQIDPHLYRVGVQQPLGELAPGATVTTDARLFAGPQEEHMLEKIAPGLELVKDYGWLTILAKPLFWLLEKLHGFLGNWGWSIIALTVLIKLVFFPLSAASYKSMGKMKDLQPRMTSIRERYKNDPQKMNQEMMGLYKTEKVNPLGGCLPIVIQIPVFIALYWVLLSSVEMRGAPWLGWIHDLSVPDPFYILPIVMAVSMFVQTKLNPTPPDPVQAKVMMIMPLVFSVMFFFFPAGLVLYWVVNNILSIAQQWQINRMLGKGKAAVVAKS

Annotated regions:
phrase: EKVVVTTDTVRAEIDTAGGIVSRLELLKEHEKDGKPVVLFERDNVRTYMARSGLIGGDLPNHTTVFTAAPGPRTLDGAEQLEVALTAEKNGVKLVKTYVFRKGSYVVDTKFAVTNAGAAPVSPTLYLELARDGSKVEQSQFYSTFTGPAVYTDADKYHKIDFEDIAKGKATVPAAANNGWVAMVQHYFASAWIPQTGKEHSFYVQQIDPHLYRVGVQQPLGELAPGATVTTDARLFAGPQEEHMLEKIAPGLELVKD
type: DOMAIN
name: Membr_insert_YidC_N
description: Membrane insertase YidC, N-terminal

phrase: GWSIIALTVLIKLVFFPLSAASYKSMGKMKDLQPRMTSIRERYKNDPQKMNQEMMGLYKTEKVNPLGGCLPIVIQIPVFIALYWVLLSSVEMRGAPWLGWIHDLSVPDPFYILPIVMAVSMFVQTKLNPTPPDPVQAKVMMIMPLVFSVMFFFFPAGLVLYWVVNNILSIAQQWQIN
type: DOMAIN
name: YidC_ALB_C
description: Membrane insertase YidC/ALB, C-terminal

phrase: KRTILWVIFSMSLVLLYDNWQRSQGHASMFFPSTTQQAASAPAASGAAAQGDVPKANVAPGAAGTAAPAAPQAAAQPTGEKVVVTTDTVRAEIDTAGGIVSRLELLKEHEKDGKPVVLFERDNVRTYMARSGLIGGDLPNHTTVFTAAPGPRTLDGAEQLEVALTAEKNGVKLVKTYVFRKGSYVVDTKFAVTNAGAAPVSPTLYLELARDGSKVEQSQFYSTFTGPAVYTDADKYHKIDFEDIAKGKATVPAAANNGWVAMVQHYFASAWIPQTGKEHSFYVQQIDPHLYRVGVQQPLGELAPGATVTTDARLFAGPQEEHMLEKIAPGLELVKDYGWLTILAKPLFWLLEKLHGFL
type: DOMAIN
name: Membr_insert_YidC_N
description: Membrane insertase YidC, N-terminal

phrase: VVVTTDTVRAEIDTAGGIVSRLELLKEHEKDGKPVVLFERDNVRTYMARSGLIGGDLPNHTTVFTAAPGPRTLDGAEQLEVALTAEKNGVKLVKTYVFRKGSYVVDTKFAVTNAGAAPVSPTLYLELARDGSKVEQSQFYSTFTGPAVYTDADKYHKIDFEDIAKGKATVPAAANNGWVAMVQHYFASAWIPQTGKEHSFYVQQIDPHLYRVGVQQPLGELAPGATVTTDARLFAGPQEEHMLEKIAPGLELVKDYGWLTILAKPLFW
type: DOMAIN
name: Membr_insert_YidC_N
description: Membrane insertase YidC, N-terminal

phrase: NWGWSIIALTVLIKLVFFPLSAASYKSMGKMKDLQPRMTSIRERYKNDPQKMNQEMMGLYKTEKVNPLGGCLPIVIQIPVFIALYWVLLSSVEMRGAPWLGWIHDLSVPDPFYILPIVMAVSMFVQTKLNPTPPDPVQAKVMMIMPLVFSVMFFFFPAGLVLYWVVNNILSIAQQWQIN
type: DOMAIN
name: YidC/Oxa/ALB_C
description: Membrane insertase YidC/Oxa/ALB, C-terminal

phrase: WGWSIIALTVLIKLVFFPLSAASYKSMGKMKDLQPRMTSIRERYKNDPQKMNQEMMGLYKTEKVNPLGGCLPIVIQIPVFIALYWVLLSSVEMRGAPWLGWIHDLSVPDPFYILPIVMAVSMFVQTKLNPTPPDPVQAKVMMIMPLVFSVMFFFFPAGLVLYWVVNNILSIAQQWQIN
type: DOMAIN
name: YidC/Oxa/ALB_C
description: Membrane insertase YidC/Oxa/ALB, C-terminal
Protein sequence:
MVNDTISDMLTRIRNANMVKHQIVQIPASKMSLAIAEILKQEGFIGDFETYSENEKKYLLISLKYVGKLRKPVICKIERVSKPGLRVYSNSKKLPRILDNLGIAIISTSKGVMTNLKAKELGIGGEVLCYIW

Annotated regions:
phrase: GIAIISTSKGVMTNLKA
type: CONSERVED_SITE
name: Ribosomal_uS8_CS
description: Small ribosomal subunit protein uS8, conserved site
Protein sequence:
MNKQLKEKLALLPDQPGCYLMKDRQKTVIYVGKAKVLKNRVRSYFTGSHDAKTQRLVSEIEDFEYIVTSSNLEALILEMNLIKKYDPKYNVMLKDDKTYPFIKITHERHPRLIVTRNVKKDKGRYFGPYPNVQAARETKKLLDRLYPLRKCSKLPDRVCLYYHLGQCLAPCVKDISEETNREIVEDITRFLKGGHNEIKKELEAKMAEAAEKLEFERAKEFRDQLAHIESTMEKQKMTMNDLLDRDVFAYAYDKGWMCVQVFFIRQGKLIERDVSMFPMYQEADEEFLTFIGQFYSKNNHFLPKEILVPDSVDRDMITELLETAVHQPKKGPKKELLLLAHKNAKIALREKFSLIERDEERSIGAAERLGEALNIYTPHRIEAFDNSNIQGTNPVSAMIVFIDGKPNKKEYRKYKIKTVTGPDDYGSMREVVRRRYTRVLRENLPLPDLIIIDGGKGQINAARDVLENELGLDVPVAGLAKDDKHRTSNLLIGDPLEPVFLERNSQEFYLLQRIQDEVHRFAISFHRQIRGKSVFQSVLDDIPGIGEKRKKMLLKHFGSVKKMKEASLDDIKKAGVPAAAAQLLFEKLKK

Annotated regions:
phrase: ALNIYTPHRIEAFDNSNIQGTNPVSAMIVFIDGKPNKKEYRKYKIKTVTGPDDYGSMREVVRRRYTRVLRENLPLPDLIIIDGGKGQINAARDVLENELGLDVPVAGLAKDDKHRTSNLLIGDPLEPVFLERNSQEFYLLQRIQDEVHRFA
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: QPGCYLMKDRQKTVIYVGKAKVLKNRVRSYFTGSHDAKTQRLVSEIEDFEYIVTSSNLEALILEMNLIKKYDPKYNVMLK
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: NEIKKELEAKMAEAAEKLEFERAKEFRDQLAHIES
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: VFAYAYDKGWMCVQVFFIRQGKLIERDVSMFPMYQEADEEFLTFIGQFYSKNNHFLPKEILVPDSVDRDMITELLETAVHQPKKGPKKELLLLAHKNAKIALREKFSLIERDEERSIGAAERLGEALNIYTPHRIEAFDNSNIQGTNPVSAMIVFIDGKPNKKEYRKYKIKTVTGPDDYGSMREVVRRRYTRVLRENLPLPDLIIIDGGKGQINAARDV
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: LPDQPGCYLMKDRQKTVIYVGKAKVLKNRVRSYFTGSHDAKTQRLVSEIEDFEYIVTSSNLEALILEMNLIKKYDPKYN
type: DOMAIN
name: GIY-YIG_UvrC_Cho
description: UvrC/Cho-like, GIY-YIG domain

phrase: DQPGCYLMKDRQKTVIYVGKAKVLKNRVRSYFTGSHDAKTQRLVSEIEDFEYIVTSSNLEALILEMNLIKKYDPKYN
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: IKKELEAKMAEAAEKLEFERAKEFRDQLAHI
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: PGCYLMKDRQKTVIYVGKAKVLKNRVRSYFTGSHDAKTQRLVSEIEDFEYIVTSSNLEALILEMNLIKKYDPKY
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease
Protein sequence:
MSETSATSLPVTEPLPAPAPAKLVDVASLSLEALSRFVTEELGERAFRAPQIYRWLHQRGATSFDEMTDLSKVLREKLRARAEIVPLVKDCELRSTDGTIKYRWKTRDGRYIESVYMPTEDRRTLCVSTQVGCAMACGFCMTGTMGLKRNLTPSEIVAQVHAVNREVRKNEGHETLRPLSNLVFMGMGEPLHNFENLKTALSILQSEDGPNFSHRHITVSTVGLVPMIERFGKETDVKLAISLNASTDEQRSKTMPVNRKWNIAALLDACRKFPLRQGRRITFEYVLIKGFNDADEDAHRLIELLKGIPVKVNLIPYNENPGLGFHTTGEERAEEFRAILADGHVAAYIRRNRGRDIAGACGQLANRGETQAGTDSTT

Annotated regions:
phrase: RTLCVSTQVGCAMACGFCMTGTMGLKRNLTPSEIVAQVHAVNREVRKNEGHETLRPLSNLVFMGMGEPLHNFENLKTALSILQSEDGPNFSHRHITVSTVGLVPMIERFGKETDVKLAISLNASTDEQRSKTMPVNRKWNIAALLDACRKFPLRQGRRITFEYVLIKGFNDADEDAHRLIELLKGIPVKVNLIPYNENPGLGFHTTGEERAEEFRAILA
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: DVASLSLEALSRFVTEELGERAFRAPQIYRWLHQRGATSFDEMTDLSKVLREKLRARAE
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: STQVGCAMACGFCMTGTMGLKRNLTPSEIVAQVHAVNREVRKNEGHETLRPLSNLVFMGMGEPLHNFENLKTALSILQSEDGPNFSHRHITVSTVGLVPMIERFGKETDVKLAISLNASTDEQRSKTMPVNRKWNIAALLDACRKFPLRQGRRITFEYVLIKGFNDADEDAHR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TEDRRTLCVSTQVGCAMACGFCMTGTMGLKRNLTPSEIVAQVHAVNREVRKNEGHETLRPLSNLVFMGMGEPLHNFENLKTALSILQSEDGPNFSHRHITVSTVGLVPMIERFGKETDVKLAISLNASTDEQRSKTMPVNRKWNIAALLDACRKFPLRQGRRITFEYVLIKGFNDADEDAHRLIELLKGIPVKVNLIPYNENPGLGFHTTGEERAEEFRAILADGHVAAYIRRNRG
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MKKIVFTGGGSAGHVTPNLAIIPHLQEQNWDISYIGSHQGIEKTIIEKEGIPYYSIASGKLRRYFDLKNIKDPFLVMKGVMDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMTPGLANKIALRFASKIFVTFEEAAKHLPKEKVIYTGSPVREEVLKGNREKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELLKKYQIVHLCGKGNLDESLQNKEGYRQFEYVHGELPDILAITDFVISRAGSNAIFEFLTLQKPMVLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVKSLIKHVEELNQNNEMYKTALKKYNGKEAIQTIIQHISEA

Annotated regions:
phrase: IVFTGGGSAGHVTPNLAIIPHLQEQNWDISYIGSHQGIEKTIIEKEGIPYYSIASGKLRRYFDLKNIKDPFLVMKGVMDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMTPGLANKIALRFASKI
type: DOMAIN
name: GlycoTrans_28_N
description: Glycosyltransferase family 28, N-terminal domain

phrase: VITIMGGSLGAKKINETVREALPELLKKYQIVHLCGKGNLDESLQNKEGYRQFEYVHGELPDILAITDFVISRAGSNAIFEFLTLQKPMVLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVKSLIKHVEELNQNNEMYKTALKKYNGKE
type: DOMAIN
name: Glyco_trans_28_C
description: Glycosyl transferase, family 28, C-terminal
Protein sequence:
MSAAALKVTTESRPGSRLAVTVTVPAERTKTSYEDAINSLSRSINLPGFRKGKVPRTVVIQQLGAVRIKASALETMVDGAWRDAIQQESLEPISQPELSGGFEGLLDSFTPGEAVTITLEADVAPTPKLKSTKGLKASFEPVAYDAAKVDEMLEDSRKQLATVVPVEGRAAEQGDIAVLGFKGTYSDDGSEIEGGSADSMDVDLEHGRMIPGFIEGVIGMAVGDSKTVDCQFPDDYPKEDARGRKAAFEIELKDLKTRELPELNDAFAKQASEQETLAELRQELEQRLKDDAERRQTSNRRDALIGALVEQLEVELPEALIQQESRNLLEQTAAQFAQQGMDVKSLFTPDLVRNLMQNSRPEAEERLRRSFALTALAEAEGISVEDDAVDAKIKEVKKELAADAKIDPQRLRQAVMDDLIQEQLMSWLEENSTLTEQAPAADDADDAEKPAAKKKPAAKKKTPAKSKTDAEA

Annotated regions:
phrase: KVTTESRPGSRLAVTVTVPAERTKTSYEDAINSLSRSINLPGFRKGKVPRTVVIQQLGAVRIKASALETMVDGAWRDAIQQESLEPISQPELSGGFEGLLDSFTPGEAVTITLEADVAPTPKLKSTKGLKASFEPVAYDAAKVDEMLE
type: DOMAIN
name: Trigger_fac_ribosome-bd_bac
description: Trigger factor, ribosome-binding, bacterial

phrase: RAAEQGDIAVLGFKGTYSDDGSEIEGGSADSMDVDLEHGRMIPGFIEGVIGMAVGDSKTVDCQFPDDYPKEDARGRKAAFEIEL
type: DOMAIN
name: PPIase_FKBP_dom
description: FKBP-type peptidyl-prolyl cis-trans isomerase domain

phrase: TLAELRQELEQRLKDDAERRQTSNRRDALIGALVEQLEVELPEALIQQESRNLLEQTAAQFAQQGMDVKSLFTPDLVRNLMQNSRPEAEERLRRSFALTALAEAEGISVEDDAVDAKIKEVKKELAADAKIDPQRLRQAVMDDLIQEQLM
type: DOMAIN
name: Trigger_fac_C
description: Trigger factor, C-terminal

phrase: GDIAVLGFKGTYSDDGSEIEGGSADSMDVDLEHGRMIPGFIEGVIGMAVGDSKTVDCQFPDDYPKEDARGRKAAFEIELKDL
type: DOMAIN
name: PPIase_FKBP_dom
description: FKBP-type peptidyl-prolyl cis-trans isomerase domain
Protein sequence:
MSQREGSLEDHQTDSSFSFLPHLEAKIRQTHNLARLLTKYADQLLEEYVQQQGEPFGLPGFSPPRLPLAGLSGPAPSHAGLPVSERLRQDAAALSALPALLDAVRRRQAELNPRAPRLLRSLEDAARQVRALGAAVETVLAALGAAARGPVPEPVATSALFTSNSAAGVFSAKVLGLHVCGLYGEWVSRTEGDLGQLVPGGVA

Annotated regions:
Protein sequence:
MTLAEFWPLCLRRLHDMLPHGQFAQWIAPLTVGEEGGVWVVYGKNQFACNMLKSQFAGKIEAVREELAAGRPAFVFKPGEGVRYEMAAVEGAVEPAEPSLHAGSEEMPVQEVLLDELPSEKPVKPAASKTAADILAERMKNLPHEPRQAAGPASRPESAAVAKARTDAQRDAEEARYEQTNLSPDYTFDTLVEGKGNRLAAAAAQAIAENPGQSYNPFFLYGSTGLGKTHLVQAVGNELLKNRPDAKVRYMHSDDYIRSFMKAVRNNTYDVFKQQYKQYDLLIIDDIQFIKGKDRTMEEFFYLYNHFHNEKKQLILTCDVLPAKIEGMDDRLKSRFSWGLTLELEPPELEMRIAILQKKAEAAGISIEDEAALFIANLIRSNVRELEGAFNRVGASSRFMNRPVIDIDLARTALQDIIAEKHKVITADIIIDAVAKYYRIKISDVLGKKRTRNIARPRQVAMSLTKELTTLSLPSIGDSFGGRDHTTVMHGIRAVAKLREEDPELAQDYEKLLILIQN

Annotated regions:
phrase: DIIIDAVAKYYRIKISDVLGKKRTRNIARPRQVAMSLTKELTTLSLPSIGDSFGGRDHTTVMHGIRA
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: DIIIDAVAKYYRIKISDVLGKKRTRNIARPRQVAMSLTKELTTLSLPSIGDSFGGRDHTTVMHGIRAVAKLREEDPELAQDYEK
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: LSPDYTFDTLVEGKGNRLAAAAAQAIAENPGQSYNPFFLYGSTGLGKTHLVQAVGNELLKNRPDAKVRYMHSDDYIRSFMKAVRNNTYDVFKQQYKQYDLLIIDDIQFIKGKDRTMEEFFYLYNHFHNEKKQLILTCDVLPAKIEGMDDRLKSRFSWGLT
type: DOMAIN
name: DnaA_dom
description: Chromosomal replication initiator protein DnaA, ATPAse domain

phrase: EFWPLCLRRLHDMLPHGQFAQWIAPLTVGEEGGVWVVYGKNQFACNMLKSQFAGKIE
type: DOMAIN
name: DnaA_N_dom
description: DnaA N-terminal domain

phrase: TADIIIDAVAKYYRIKISDVLGKKRTRNIARPRQVAMSLTKELTTLSLPSIGDSFGGRDHTTVMHGIRA
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: IGDSFGGRDHTTVMHGIRA
type: CONSERVED_SITE
name: Chromosome_initiator_DnaA_CS
description: Chromosomal replication control, initiator DnaA, conserved site

phrase: SYNPFFLYGSTGLGKTHLVQAVGNELLKNRPDAKVRYMHSDDYIRSFMKAVRNNTYDVFKQQYKQYDLLIIDDIQFIKGKDRTMEEFFYLYNHFHNEKKQLILTCDVLPAKIEGMDDRLKSRFSWGLTLE
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain