Protein sequence:
MIKKNLFKDFSRFSFVQSSIKNNVRCHSKLKLVQPFFIKTKQERNKKFLSSYKFSEIQLITIDLASPEKIKEWAEKKLPNGKIFGQVTNPNTLHYKTLKPLKGGLFCERIFGPIKDFECACGIQKQKPFNRIISFQNKQFCSKCDIEYTWSDIRRYQLGYIQLVTPVTHLWYLKGMPSYIRSVLGAKKKHIEAIAYCSEIVTIDQAWKPNRLIPFPETISSVALSSKKRNTFVNKEIVNIQLTYNNFKKFNVNNTRSLYVSINKKLFKKQFSNNSYNCTCVDNEIQNPIFFLKYFNINFLKPQNLKELKVLYINPDFYKVENYPYKNQVKFEFYQKICRSFIKTSLNNHKPIYALNYLSHSFLNSKVKIFSHFEHIDIHTMYVFNEEILINRFSNLARLKKNGKSKKKIGYIHSKKIHININKHLLYFKNKKLKNLQLSNNLKLIIIISNNASLNYFKNWSNTFNCMNTLILKMQFVNKKLHFQYYRSFFNTHTIERVYFNFFSLDYLKNSNFFVNFSKLLALNLLKFMKSNLFNIFIIPIPTILDNFIFKLSLDSQFQRLLNSLSIQKQKVLNSNSVISKSNKIFKKQFFIKNFSLYDEAIEILWQRFWKFGYYFTSNNMNNKLCKIITKFNKNNNGLRSTLPSWLKLIKKLIKKTQIDKKSNQNLLNFRVNVIHTNTQNKFSLFVNLIKIYLKKVLFLFQIAPENIKNIYIKKSIFIFQELRNKNFKYRNFRTQIKKIVIKLFGLELLPWVLSQFIFTSKIFYQFQKSKFSFYHNSNFLTFSRRHSGRNLIKKIKESSFLNFQIGVNNINTIFHYKYSFNCLPSCHIPNYKCRQKFFIYKNKIENILKLKKFRLFFNIWLSRFLKNNISVLNVVVNLKLNNINSNNLQTLNLLFYQKKWLLKKKQIFYNYAMLKEFHSKLLIVGTLHDFSNFIKLIYSSSYKNETLINIFSIQIQPFYKFNFIQKIRKYLNSEYYNSFDSGRTKHYLRKFLNKDSDNLFFKQFNYVYYFILFSSIISTQTIERGSLTSLNNQQFFLNLLCFFKLAKKNIFKKYSWLTSIQKYFYSRQIIKYKKKQQQKSMLKFVKKKTFFNKFLDLINSFIYDYQKRLKLLKKHSIIQLILKKKMYIFYFLKKLQNKLINEIQKYYFYEFEKKKFINIEFNLNNFKNIVIFMNLKKKILFLNSVLFQSQTNFFNKHANLNIFNNSYNYMYIDFNNFLSIGQFWQILINIFKNKINKYYLLSRSLPFIISNDYVKIDPLIKKFHDDLKHQVCFNSFLIKLTFYNSTLLYPLQNIIKNNNKVLQTRQQYYKIIKSNNLFLTNYFKKIRGNFTELSIKKFENIHTIVSCIGYFGYQDILYHQIRELKKNDYFRNFYLKFIKHDLSNNFNEAIFSVISESRISYNDSIFWNNIYSLSNRYSWKSDIELNIFLCYMLSPETPSDILIPLYKQRIHSSNVLREEPPIAGGGIILKLLKELDLPEMKKIDIQLQTILKKIPNKLHEIEVLLKHNQTNLKLLKYYSLKRRTVIEIEKSILRKLKYIRRLNWVSAKPEYMIIRNLPVLPADLRPIFKIQQQLTASDLNRLYQKVIYRNDRLKRFLKNSTTSNSFEMLFAQRMLQEAVDNLIENGKDINSIETDSRGRPLKSLGELLKGKKGRFRQNLLGKRVDYSGRSVIVVGPKLKLHECGLPIEMAIELFLPFLIKEILKNKYALTVRSAKIYIKKHRIKITQLLRQVVKRQPILLNRAPTLHRLGIQAFLPKLVEGKAILLHPLVCSAFNADFDGDQMAVHVPITNEARIEAWKLVLSRNNLLSPATGEPILLPSQDMVLGCYYLTIENLQSLTQKKFRINRKILNQRNYIFSDFEKIFIAYQRNQINLHTNIWVIFNNTIESDSILQEPTEIQVLFSGQYIKVYSDYYQKFNRNGKIYNQVVRTTPGRILFNLMLNNCFN

Annotated regions:
phrase: NLLSPATGEPILLPSQDMVLGCYYLTIENLQSLTQKKFRINRKILNQRNYIFSDFEKIFIAYQRNQINLHTNIWVIFNNTIESDSILQEPTEIQVLFSGQYIKVYSDYYQKFNRNGKIYNQVVRTTPGRILFNLM
type: DOMAIN
name: RNA_pol_Rpb1_3
description: RNA polymerase Rpb1, domain 3

phrase: EIQLITIDLASPEKIKEWAEKKLPNGKIFGQVTNPNTLHYKTLKPLKGGLFCERIFGPIKDFECACGIQKQKPFNRIISFQNKQFCSKCDIEYTWSDIRRYQLGYIQLVTPVTHLWYLKGMPSYIRSVLGAKKKHIEAIAYCSEIVTIDQAWKPNRLIPFPETISSVALSSKKRNTFVNKEIVNIQLTYNNFKKFNVNNTRSLYVSINKKLF
type: DOMAIN
name: RNA_pol_Rpb1_1
description: RNA polymerase Rpb1, domain 1

phrase: KIPNKLHEIEVLLKHNQTNLKLLKYYSLKRRTVIEIEKSILRKLKYIRRLNWVSAKPEYMIIRNLPVLPADLRPIFKIQQQLTASDLNRLYQKVIYRNDRLKRFLKNSTTSNSFEMLFAQRMLQEAVDNLIENGKDINSIETDSRGRPLKSLGELLKGKKGRFRQN
type: DOMAIN
name: RNA_pol_Rpb1_1
description: RNA polymerase Rpb1, domain 1

phrase: EYMIIRNLPVLPADLRPIFKIQQQLTASDLNRLYQKVIYRNDRLKRFLKNSTTSNSFEMLFAQRMLQEAVDNLIENGKDINSIETDSRGRPLKSLGELLKGKKGRFRQNLLGKRVDYSGRSVIVVGPKLKLHECGLPIEMAIELFLPFLIKEILKNKYALTVRSAKIYIKKHRIKITQLLRQVVKRQPILLNRAPTLHRLGIQAFLPKLVEGKAILLHPLVCSAFNADFDGDQMAVHVPITNEARIEAWKLVLSRNNLLSPATGEPILLPSQDMVLGCYYL
type: DOMAIN
name: RNA_pol_N
description: RNA polymerase, N-terminal

phrase: GKRVDYSGRSVIVVGPKLKLHECGLPIEMAIELFLPFLIKEILKNKYALTV
type: DOMAIN
name: RNA_pol_asu
description: RNA polymerase, alpha subunit

phrase: HRIKITQLLRQVVKRQPILLNRAPTLHRLGIQAFLPKLVEGKAILLHPLVCSAFNADFDGDQMAVHVPITNEARIEAWKL
type: DOMAIN
name: RNA_pol_asu
description: RNA polymerase, alpha subunit