nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MNSKKDISKTVIKGMNLSQITKWCEDLNQSSFRASQIYQWMYKHGVANAGSMNNISKELKNIIDNQCTLNTLEIEKIDKSSVEKTQKILFKTHDGHFIESVSMVEKDRHTICISSQIGCNVDCDFCATASMGLIRNLMAGEIIDQAIAIRSMVKEPITNVVFMGMGEPFLNYERVINAADILHDHNGFGLGAKRITISTSGIVPMIDRFVKEKHKYKLAISLNATDDNTRKKIMPINRRWPINDLIKSASRFAARKNHNVMFEYVLLKGINDTNQDAIRLAKLIRGIDCKVNIIPYNETDGKYKRPNDEKIEKFLEVLNKHRSGFRILVRWSKGQDINAACGQLAVKN

Annotated regions:
phrase: EKDRHTICISSQIGCNVDCDFCATASMGLIRNLMAGEIIDQAIAIRSMVKEPITNVVFMGMGEPFLNYERVINAADILHDHNGFGLGAKRITISTSGIVPMIDRFVKEKHKYKLAISLNATDDNTRKKIMPINRRWPINDLIKSASRFAARKNHNVMFEYVLLKGINDTNQDAIRLAKLIRGIDCKVNIIPYNETDGKYKRPNDEKIEKFLEVLNKHRSGFRILVRWSKGQDI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: KGMNLSQITKWCEDLNQSSFRASQIYQWMYKHGVANAGSMNNISKELKNIIDNQ
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: SSQIGCNVDCDFCATASMGLIRNLMAGEIIDQAIAIRSMVKEPITNVVFMGMGEPFLNYERVINAADILHDHNGFGLGAKRITISTSGIVPMIDRFVKEKHKYKLAISLNATDDNTRKKIMPINRRWPINDLIKSASRFAARKNHNVMFEYVLLKGINDTNQDAIR
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MLLKHFPHDEKPRERFIKYGPSSLSNHELVAILLRTGTKKESVLQISARLLQTFGGLRSVREATIEEMSKIRGVGKAKAISLLAALELGTRLHHQTTDNRYVIRTPEDGANFVMEDMRFLTQENFVCLYLNTKNQVLHKHTVFIGSLNSSIVHPREIFKEAFKRSAASFICVHNHPSGDPTPSREDIEVTQRLFECGKLIGIQLLDHLVIGDQKFVSLKEKGYL

Annotated regions:
phrase: EDGANFVMEDMRFLTQENFVCLYLNTKNQVLHKHTVFIGSLNSSIVHPREIFKEAFKRSAASFICVHNHPSGDPTPSREDIEVTQRLFECGKLIGIQLLDHLVIGDQKFVSL
type: DOMAIN
name: RadC_JAB
description: RadC-like JAB domain

phrase: HNHPS
type: CONSERVED_SITE
name: UPF0758_CS
description: Uncharacterised protein family UPF0758, conserved site

phrase: KHFPHDEKPRERFIKYGPSSLSNHELVAILLRTGTKKESVLQISARLLQTFGGLRSVREATIEEMSKIRGVGKAKA
type: DOMAIN
name: UPF0758_N
description: UPF0758, N-terminal

phrase: VIRTPEDGANFVMEDMRFLTQENFVCLYLNTKNQVLHKHTVFIGSLNSSIVHPREIFKEAFKRSAASFICVHNHPSGDPTPSREDIEVTQRLFECGKLIGIQLLDHLVIGDQKFVSLKEKGY
type: DOMAIN
name: MPN
description: MPN domain

phrase: IRTPEDGANFVMEDMRFLTQENFVCLYLNTKNQVLHKHTVFIGSLNSSIVHPREIFKEAFKRSAASFICVHNHPSGDPTPSREDIEVTQRLFECGKLIGIQLLDHLVIGDQKFVSLKEK
type: DOMAIN
name: RadC_JAB
description: RadC-like JAB domain
Protein sequence:
MKSVLLLTTLLVPAHLVAAWSNNYAVDCPQHCDSSECKSSPRCKRTVLDDCGCCRVCAAGRGETCYRTVSGMDGMKCGPGLRCQPSNGEDPFGEEFGICKDCPYGTFGMDCRETCNCQSGICDRGTGKCLKFPFFQYSVTKSSNRFVSLTEHDMASGDGNIVREEVVKENAAGSPVMRKWLNPR

Annotated regions:
phrase: CPQHCDSSECKSSPRCKRTVLDDCGCCRVCAAGRGETCYRTVSGMDGMKCGPGLR
type: DOMAIN
name: IGFBP-like
description: Insulin-like growth factor-binding protein, IGFBP

phrase: YAVDCPQHCDSSECKSSPRCKRTVLDDCGCCRVCAAGRGETCYRTVSGMDGMKCGPGLRCQPSNGEDPFGEEFGICKD
type: DOMAIN
name: IGFBP-like
description: Insulin-like growth factor-binding protein, IGFBP

phrase: VDCPQHCDSSECKSSPRCKRTVLDDCGCCRVCAAGRGETCYRTVSGMDGMKCGPGLRCQPSNGEDPFGEEFGICK
type: DOMAIN
name: IGFBP-like
description: Insulin-like growth factor-binding protein, IGFBP
Protein sequence:
MDIRKVKKLIELLEESGIDELEIREGEESVRISRHSKTAAQPVYAQAPAFAAPVAAPAPAAAAPAAAAAESAPAAPKLNGNVVRSPMVGTFYRAASPTSANFVEVGQSVKKGDILCIVEAMKMMNHIEAEVSGTIESILVENGQPVEFDQPLFTIV

Annotated regions:
phrase: VVRSPMVGTFYRAASPTSANFVEVGQSVKKGDILCIVEAMKMMNHIEAEVSGTIESILVENGQPVEFDQPLFT
type: DOMAIN
name: Biotin_lipoyl
description: Biotin/lipoyl attachment

phrase: GNVVRSPMVGTFYRAASPTSANFVEVGQSVKKGDILCIVEAMKMMNHIEAEVSGTIESILVENGQPVEFDQPLFTI
type: DOMAIN
name: Biotin_lipoyl
description: Biotin/lipoyl attachment

phrase: GDILCIVEAMKMMNHIE
type: BINDING_SITE
name: Biotin_BS
description: Biotin-binding site
Protein sequence:
MGPVMLDVLGYELDAEEREILQHPLVGGLILFSRNYHDPAQLAELVRQIRAASRNRLVVAVDQEGGRVQRFREGFTRLPAMQSFYALNNEAKAAELAQQAGWLMASEMIAMDIDISFAPVLDIGHGSAAIGERSFHEDPAIALRMARQFIRGMHDAGMKTTGKHFPGHGAVSADSHKETPRDDRSEQEIRQHDMQIFKQLIEEQALDAIMPAHVIYTQIDPRPASGSSHWLQTVLRGELGYDGVIFSDDLSMEGAAIMGSYAERGQASLDAGCDMILVCNNRQGAVSVLDNLSPINAERVSRLYHRGTFTRQQLLDSPRWKEANKALTALQSRWLEQKGS

Annotated regions:
phrase: VLRGELGYDGVIFSDDL
type: ACTIVE_SITE
name: Glyco_hydro_3_AS
description: Glycoside hydrolase, family 3, active site

phrase: YELDAEEREILQHPLVGGLILFSRNYHDPAQLAELVRQIRAASRNRLVVAVDQEGGRVQRFREGFTRLPAMQSFYALNNEAKAAELAQQAGWLMASEMIAMDIDISFAPVLDIGHGSAAIGERSFHEDPAIALRMARQFIRGMHDAGMKTTGKHFPGHGAVSADSHKETPRDDRSEQEIRQHDMQIFKQLIEEQALDAIMPAHVIYTQIDPRPASGSSHWLQTVLRGELGYDGVIFSDDLSMEGAAIMGSYAERGQASLDAGCDMILVCNNRQGAVSVLDNLSPINAERV
type: DOMAIN
name: Glyco_hydro_3_N
description: Glycoside hydrolase, family 3, N-terminal
Protein sequence:
MSFQDPQPLDLKNYIREIPDFPKRGILFYDISTLIRSPDAWQVATARLARVIAAWQPDILAGIESRGFLTAAPLALRLGCGFTMLRKPGKLPGKTISLKYGLEYGEDELHIQADAIKPGQRVVVLDDLLATGGTLAASIDLLRKVGAEVVGASVLIELADLKGREKLDVPLNALMTYDE

Annotated regions:
phrase: ATARLARVIAAWQPDILAGIESRGFLTAAPLALRLGCGFTMLRKPGKLPGKTISLKYGLEYGEDELHIQADAIKPGQRVVVLDDLLATGGTLAASIDLLRKVGAEVVGASVLIELADLKGRE
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: AAWQPDILAGIESRGFLTAAPLALRLGCGFTMLRKPGKLPGKTISLKYGLEYGEDELHIQADAIKPGQRVVVLDDLLATGGTLAASIDLLRKVGAEVVGASVLIEL
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain
Protein sequence:
MGERPCILAIDQGTTSSRAIVFDAAASVLAVAQTEFPQHYPADGWVEHDPEDIWRSTLEVSRQALQAAEAKGARVVAIGVTNQRETTLIWDRRTGRPIHNAIVWQDRRTAADCAALAADGNETMVQARSGLLLDPYFSATKAAWLLDHVSGARMRAENGHLAFGTVDSFLLWRLTGGRVHATDATNASRTNLFNIHTQDWDPELLRLFRVPAALLPEVKDSADSFGQTDPALFGRPLPVLGLVGDQQGATIGQCCFEPGTIKSTYGTGCFVVVNTGATPVPSRHRLLTTIAYRIDGRTDYALEGSIFIAGAAVQWLRDGLGIVRTAAETEALAAGLPDNGGVYMVPAFTGLGAPHWDAAARGTLTGLTRASGRAHLARAALEASCYQTCDLLAAMREDGATPAALRVDGGMVANGWMVQFLADLLDLPVDRPVVMETTALGAAYLAGRKAGLYGDFAEFTRVWRRDRRFDPAMPTSTRTALLAGWQDAVRRTRSGAPD

Annotated regions:
phrase: GTLTGLTRASGRAHLARAAL
type: CONSERVED_SITE
name: Carb_kinase_FGGY_CS
description: Carbohydrate kinase, FGGY, conserved site

phrase: STYGTGCFVVVNTGATPVPSRHRLLTTIAYRIDGRTDYALEGSIFIAGAAVQWLRDGLGIVRTAAETEALAAGLPDNGGVYMVPAFTGLGAPHWDAAARGTLTGLTRASGRAHLARAALEASCYQTCDLLAAMREDGATPAALRVDGGMVANGWMVQFLADLLDLPVDRPVVMETTALGAAYLAG
type: DOMAIN
name: FGGY_C
description: Carbohydrate kinase FGGY, C-terminal

phrase: ILAIDQGTTSSRAIVFDAAASVLAVAQTEFPQHYPADGWVEHDPEDIWRSTLEVSRQALQAAEAKGARVVAIGVTNQRETTLIWDRRTGRPIHNAIVWQDRRTAADCAALAADGNETMVQARSGLLLDPYFSATKAAWLLDHVSGARMRAENGHLAFGTVDSFLLWRLTGGRVHATDATNASRTNLFNIHTQDWDPELLRLFRVPAALLPEVKDSADSFGQTDPALFGRPLPVLGLVGDQQGATI
type: DOMAIN
name: FGGY_N
description: Carbohydrate kinase FGGY, N-terminal
Protein sequence:
MAKAKFERTKPHVNIGTIGHVDHGKTTLTAAITKVLADKYPDLNQSFAFDQIDKAPEEKARGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMPQTREHVLLARQVGVPYILVALNKADMVDDEEILELVEMEVRELLAAQEFDEEAPVVRVSGLKALEGDPKWVKSVEDLMDAVDESIPDPVRETDKPFLMPIEDVFTITGRGTVVTGRVERGIINVNEEVEITGIRPETTKTTVTGIEMFRKLLDQGQAGDNVGLLIRGIKREDVERGQVVIKPGTTTPHTEFEGQAYILSKDEGGRHTPFFNNYRPQFYFRTTDVTGVVTLPEGTEMVMPGDNTEMSVKLIQPVAMEEGLRFAIREGGRTVGAGRVTKIIK

Annotated regions:
phrase: VNIGTIGHVDHGKTTLTAAITKVLADKYPDLNQSFAFDQIDKAPEEKARGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMPQTREHVLLARQVGVPYILVALNKADMVDDEEILEL
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: KPHVNIGTIGHVDHGKTTLTAAITKVLADKYPDLNQSFAFDQIDKAPEEKARGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMPQTREHVLLARQVGVPYILVALNKADMVDDEEILELVEMEVRELLAAQEFDEEAPVVRVSGLKALEGDPKWVKSVEDLMDAVDESIPDP
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: FLMPIEDVFTITGRGTVVTGRVERGIINVNEEVEITGIRPETTKTTVTGIEMFRKLLDQGQAGDNVGLLIRGIKREDVERGQVVIKP
type: DOMAIN
name: EFTU_2
description: Elongation factor Tu, domain 2

phrase: DKAPEEKARGITINI
type: CONSERVED_SITE
name: G_TR_CS
description: Tr-type G domain, conserved site

phrase: KPHVNIGTIGHVDHGKTTLTAAITKVLADKYPDLNQSFAFDQIDKAPEEKARGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMPQTREHVLLARQVGVPYILVALNKADMVDDEEILELVEMEVRELLAAQEFDEEAPVVRVSGLKALEGDPKWVKSVEDLMDAVDESI
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: TTPHTEFEGQAYILSKDEGGRHTPFFNNYRPQFYFRTTDVTGVVTLPEGTEMVMPGDNTEMSVKLIQPVAMEEGLRFAIREGGRTVGAGRVTK
type: DOMAIN
name: Transl_elong_EFTu/EF1A_C
description: Translation elongation factor EFTu/EF1A, C-terminal

phrase: GTVVTGRVERGIINVNEEVEITGIRPETTKTTVTGIEMFRKLLDQGQAGDNVGLLIRGIKREDVERGQV
type: DOMAIN
name: EFTu-like_2
description: Translation elongation factor EFTu-like, domain 2

phrase: PHVNIGTIGHVDHGKTTLTAAITKVLADKYPDLNQSFAFDQIDKAPEEKARGITINISHVEYQTEKRHYAHVDAPGHADYIKNMITGAAQMDGAILVVAATDGPMPQTREHVLLARQVGVPYILVALNKADMVDDEEILELVEMEVRELLAAQEFDEEAPVVRVSGLKALEGDPKWVKSVEDLMDAVDESIPD
type: DOMAIN
name: EF-Tu_GTP-bd
description: Elongation factor Tu (EF-Tu), GTP-binding domain

phrase: NIGTIGHVDHGKT
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: ARGITINI
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: AHVDAPGHAD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: TGAAQMDGAIL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: ILVALNKAD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain
Protein sequence:
MTNQRLVLASNNAGKIRELGELLAPLNLTVESQASLGVSEAEEPAVTFVENALIKARHAASHTGLPALADDSGLAVDALDGAPGVRSARYAGPNATDQDNVNRLLEAMADVPDDQRGAQFHCVLVYLRHAEDPTPIICHGVWHGSILREPVGEGGFGYDPVFWVPDAGCSAAELERSVKGRMSHRGKALEGLLASLKLRGGT

Annotated regions:
Protein sequence:
MSNPFPAHFLWGGAIAANQVEGAYLTDGKGLSTSDLQPQGIFGEIVTRQPGDSGIKDVAIDFYHRYPQDIALFAEMGFTCLRISIAWTRIFPQGDEAEPNEAGLAFYDRLFDELAKYGIQPLVTLSHYEMPYGLVEKHGGWGNRLTIDCFERYARTVFARYRHKVKRWLTFNEINMSLHAPFTGVGLPPDSDKAAIYQAIHHQLVASARAVKACHDMIPDAQIGNMLLGAMLYPLTSKPEDVMESLHQNREWLFFGDVQVRGAYPGYMHRYFREQGITLNITAQDKQDLKATVDFISFSYYMTGCVTTDEAQLEKTRGNILNMVPNPYLESSEWGWQIDPLGLRYLLNFLYDRYQKPLFIVENGLGAKDKIEENGDIYDDYRIRYLNDHLVQVGEAIDDGVEVLGYTCWGPIDLVSASKAEMSKRYGFIYVDRDDAGHGSLERRRKKSFYWYQSVIASHGKTLTR

Annotated regions:
phrase: LFIVENGL
type: ACTIVE_SITE
name: Glyco_hydro_1_AS
description: Glycoside hydrolase family 1, active site

phrase: FLWGGAIAANQVEG
type: CONSERVED_SITE
name: Glyco_hydro_1_N_CS
description: Glycosyl hydrolases family 1, N-terminal conserved site
Protein sequence:
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLMDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPVSQATAAPSEFSAFELELNALVRRHFPHWGARDLLGDK

Annotated regions:
phrase: SLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLMDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEV
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: MRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLL
type: DOMAIN
name: CysN_II
description: Sulfate adenylyltransferase subunit CysN, Domain II

phrase: RFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLMDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQ
type: DOMAIN
name: CysN_GTP-bd
description: Sulfate adenylyltransferase subunit CysN, GTP-binding domain

phrase: AVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGM
type: DOMAIN
name: CysN_NoDQ_III
description: Sulfate adenylyltransferase subunit CysN, Domain III

phrase: DGLQAEREQGITIDV
type: CONSERVED_SITE
name: G_TR_CS
description: Tr-type G domain, conserved site

phrase: VDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMV
type: DOMAIN
name: GTP-eEF1A_C
description: GTP-eEF1A, C-terminal domain

phrase: GSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLMDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNV
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: KSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLMDYSEETFTRIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQ
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: RFLTCGSVDDGKS
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: EQGITIDV
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: IIADTPGHEQ
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: TGASTCELAIL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: LVVAINKMD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain
Protein sequence:
MLDMGQDRPIDGSGAPGADDTRVEVQPPAQWVLDLIEASPIASVVSDPRLADNPLIAINQAFTDLTGYSEEECVGRNCRFLAGSGTEPWLTDKIRQGVREHKPVLVEILNYKKDGTPFRNAVLVAPIYDDDDELLYFLGSQVEVDDDQPNMGMARRERAAEMLKTLSPRQLEVTTLVASGLRNKEVAARLGLSEKTVKMHRGLVMEKLNLKTSADLVRIAVEAGI

Annotated regions:
phrase: LSPRQLEVTTLVAS
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: GLRNKEVAARLGLSEK
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: TVKMHRGLVMEK
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: IEASPIASVVSDPRLADNPLIAINQAFTDLTGYSEEECVGRNCRFLAGSGTEPWLTDKIRQGVREHKPVLVEILNYKKDGTPFRNAVLVAPIYDDDDELLYFLGSQVEV
type: DOMAIN
name: PAS
description: PAS domain

phrase: TLSPRQLEVTTLVASGLRNKEVAARLGLSEKTVKMHRGLVMEKLNLKTSADLVRI
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: KPVLVEILNYKKDGTPFRNAVLVAPIYDDDDELLYFLGSQVEVDDDQPNMGMAR
type: DOMAIN
name: PAS-assoc_C
description: PAS-associated, C-terminal

phrase: DNPLIAINQAFTDLTGYSEEECVGRNCRFLAGSGTEPWLTDKIRQGVREHKPVLVEILNYKKDGTPFRNAVLVAPIYDDDDELLYFLGSQ
type: DOMAIN
name: PAS
description: PAS domain

phrase: QWVLDLIEASPIASVVSDPRLADNPLIAINQAFTDLTGYSEEECVGRNCRFLAGSGTEPWLTDKIRQGV
type: DOMAIN
name: PAS
description: PAS domain

phrase: LKTLSPRQLEVTTLVASGLRNKEVAARLGLSEKTVKMHRGLVMEKLNLKTSADLVRI
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: SPIASVVSDPRLADNPLIAINQAFTDLTGYSEEECVGRNCRFLAGSGTEPWLTDKIRQGVREHKPVLVEILNYKKDGTPFRNAVLVAPIYDDDDELLYFLGSQVE
type: DOMAIN
name: PAS
description: PAS domain

phrase: LSPRQLEVTTLVASGLRNKEVAARLGLSEKTVKMHRGLVMEKLNLKTSADLVRIAV
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: AAEMLKTLSPRQLEVTTLVASGLRNKEVAARLGLSEKTVKMHRGLVMEKLNLKTSADLVRIAVEA
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: LVEILNYKKDGTPFRNAVLVAPIYDDDDELLYFLGSQVEVDD
type: REPEAT
name: PAC
description: PAC motif

phrase: ADNPLIAINQAFTDLTGYSEEECVGR
type: DOMAIN
name: PAS
description: PAS domain
Protein sequence:
MAQAEGAYHRPLATSRLELNLVRLLCRCESMAAEKREPDEWRLEKYVGALEDMLQALKVQASKPASEVISEYSRKVDFLKGMLQAEKLTSSSEKALANQFLAPGRVPTTAKERVPATKTVHLQSRARYTSEMRSELLGMEPSGECEVDMRKRAAKGSRPADERQSASELDLVLQRHQGLQEKLAEEMLGLARSLKTNTLAAQSVIKKDNQTLSHSLKMADQNLEKLKLESERLEQHAQKSVNWLLWAMLIVVCFVFISMILFIRIMPRLK

Annotated regions:
Protein sequence:
MKSVEEQLALIQRGADEILVEAELVAKLKRGQPLRIKAGFDPTAPDLHLGHTVLINKLRQFQDLGHQVIFLIGDFTGMIGDPSGKSVTRPPLTREQVLENAETYKSQVFKILDPAKTEVAFNSTWMDQLTPADFIRLASQYTVARMLERDDFSKRYASNQPIAIHEFLYPLVQGYDSVALKADVELGGTDQKFNLLMGRELQRAYGQEAQVILTMPLLEGLDGVKKMSKSLGNYIGIQEAPGVMYSKLVSIPDTLMWRYFELLSFRSLDEIDSFRKDVEAGANPRDIKIKLAEEIVARFHGEEAAASAHKSAGNRLKEGELPEDLPEIELSSPEDMPVASVLNKAGLVKNAAAARDLLGAGSVKVDGQVVDRTFMLALGETRVFQAGKKAFARITLKAE

Annotated regions:
phrase: PTAPDLHLGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site
Protein sequence:
MKVTGIMKNYWGWGTMLLGLLMICSVAGNLWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEMVLENVTENFNMWKNEMVNQMHEDVISIWDQSLKPCVKLTPLCVTLKCTNVTHNETYNVVTNKVMRNCSFNTTTVLTDKKQKVEALFYKLDIVPLTEENNSSKNSSEYYRLINCNTSAITQACPKITFDPIPIHYCTPAGYAILKCNDKKFNGTGPCSNVSTVQCTHGIKPVVSTQLLLNGSLAEEEIIVRSENLTNNVKTIIVHLNQSVEIVCTRPGNNTRKSIRIGPGQTFYATGEVIGNIRQAHCNISEDKWNETLQRVSKKLAEHFPNKTIKFASSTGGDLEITMHSFNCRGEFFYCNTSGLFNGTYNSNDTKGNSSSNSIITIPCRIKQIINMWQEVGRAMYAPPIAGNITCKSNITGLLLVRDGGQDSNETDNGTEIFRPGGGDMRDNWRNELYKYKVVEIKPLGVAPTPAKRRVVEREKRAVGIGAVFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQTRVLAIERYLKDQQLLGIWGCSGKLICTTAVPWNSSWSNKSQEDIWGNMTWMQWDREISNYTNTIYSLLEESQNQQEKNEKDLLALDSWKNLWNWFDITKWLWYIKIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSLQTLLPNPGGADRLGRIEEEGGEQDRDRSIRLVNGFLALAWDDLRNLCLFSYHRLRD

Annotated regions:
phrase: VQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQTRVLAIERYLKDQQLLGIWGCSGKLICTTAVPWNSSWSNKSQEDIWGNMTWMQWDREISNYTNTIYSLLEESQNQQEKNEKDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQTRVLAIERYLKDQQLLGIWGCSGKLICTTAVPWNSSWSNKSQEDIWGNMTWMQWDREISNYTNTIYSLLEESQNQQEKNEKDLLALDSWKNLWNWFDITKWLWYIKIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSLQ
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEMVLENVTENFNMWKNEMVNQMHEDVISIWDQSLKPCVKLTPLCVTLKCTNVTHNET
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: NETYNVVTNKVMRNCSFNTTTVLTDKKQKVEALFYKLDIVPLTEENNSSKNSSEYYRLINCNTSAITQACPKITFDPIPIHYCTPAGYAILKCNDKKFNGTGPCSNVSTVQCTHGIKPVVSTQLLLNGSLAEEEIIVRSENLTNNVKTIIVHLNQSVEIVCTRPGNNTRKSIRIGPGQTFYATGEVIGNIRQAHCNISEDKWNETLQRVSKKLAEHFPNKTIKFASSTGGDLEITMHSFNCRGEFFYCNTSGLFNGTYNSNDTKGNSSSNSIITIPCRIKQIINMWQEVGRAMYAPPIAGNITCKSNITGLLLVRDGGQDSNETDNGTEIFRPGGGDMRDNWRNELYKYKVVEIKPLGVAPTPAKRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MATEKSVTPTEEQLEILEYNFCKVNKHPDPTTLCLIAAETGLSEEQTLKWFKQRLAEWRKSEGLPSECGSVRD

Annotated regions:
phrase: KSVTPTEEQLEILEYNFCKVNKHPDPTTLCLIAAETGLSEEQTLKWFKQRLAEWRKS
type: DOMAIN
name: HD
description: Homeodomain

phrase: MATEKSVTPTEEQLEILEYNFCKVNKHPDPTTLCLIAAETGLSEEQTLKWFKQRLAEWRK
type: DOMAIN
name: HD
description: Homeodomain

phrase: VTPTEEQLEILEYNFCKVNKHPDPTTLCLIAAETGLSEEQTLKWFKQRLAEWR
type: DOMAIN
name: HD
description: Homeodomain

phrase: TEKSVTPTEEQLEILEYNFCKVNKHPDPTTLCLIAAETGLSEEQTLKWFKQRLAEWRKSEGL
type: DOMAIN
name: HD
description: Homeodomain
Protein sequence:
MTQEMPFDVTRARRAGARLAAVQALYEMEQTEKSARATIREFMEDRLGLGPDGTPVEDADPDLFKSIVNSVVEHQAKIDTAILARLAEGWKLTRLDATMRALLRAGAAEFIAHQELSDAIILSEYVSLAHDFFDEGDAKFANAVLQNMGRDLRA

Annotated regions:
phrase: ARLAAVQALYEMEQTEKSARATIREFMEDRLGLGPDGTPVEDADPDLFKSIVNSVVEHQAKIDTAILARLAEGWKLTRLDATMRALLRAGAAEFIAHQELSDAIILSEYVSLAHDFFDEGDAKFANAVLQNM
type: DOMAIN
name: NusB_RsmB_TIM44
description: NusB/RsmB/TIM44
Protein sequence:
MQKRELYEIADGKLVRKHRFCPRCGPGVFLAEHADRFTCGRCGYTEFKKVKKAKS

Annotated regions:
phrase: ELYEIADGKLVRKHRFCPRCGPGVFLAEHADRFTCGRCGY
type: DOMAIN
name: Ribosomal_eS31
description: Small ribosomal subunit protein eS31

phrase: KRELYEIADGKLVRKHRFCPRCGPGVFLAEHADRFTCGRCGY
type: DOMAIN
name: Ribosomal_eS31
description: Small ribosomal subunit protein eS31
Protein sequence:
MILIDGKSLSKDLKERLATQVQEYKHNTAITPKLVAIIVGNDPASKTYVASKEKACAQVGIDSQVITLPEHTTESELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDVDGFHPTNVGRLQLRDKKCLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSHTTKADILIVAVGKPNFITADMVKEGAVVIDVGINHVDGKIVGDVDFAAVKDKVAAITPVPGGVGPMTITELLYNTFQCAQELNR

Annotated regions:
phrase: HPTNVGRLQLRDKKCLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSHTTKADILIVAVGKPNFITADMVKEGAVVIDVGINHVDGKIVGDVDFAAVKDKVAAITPVPGGVGPMTITELLYNTFQCAQ
type: DOMAIN
name: THF_DH/CycHdrlase_NAD-bd_dom
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain

phrase: ESELLELIDQLNNDSSVHAILVQLP
type: CONSERVED_SITE
name: THF_DH/CycHdrlase_CS
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site

phrase: IDGKSLSKDLKERLATQVQEYKHNTAITPKLVAIIVGNDPASKTYVASKEKACAQVGIDSQVITLPEHTTESELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDV
type: DOMAIN
name: THF_DH/CycHdrlase_cat_dom
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain

phrase: PEKDVDGFHPTNVGRLQLRDKKCLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSHTTKADILIVAVGKPNFITADMVKEGAVVIDVGINHVDGKIVGDVDFAAVKDKVAAITPVPGGVGPMTITELLYNTFQCA
type: DOMAIN
name: THF_DH/CycHdrlase_NAD-bd_dom
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain

phrase: PGGVGPMT
type: CONSERVED_SITE
name: THF_DH/CycHdrlase_CS
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site
Protein sequence:
MVLRSEILVNKNVMPTAEQALPGRETPMSLPEFHYVFKDTPLLGPFFEGSIDFAIFGLGCFWGAERRFWQREGVVSTVVGYAGGFTPNPTYEEVCSGLTGHTEVVLVVFDKDKVSYRELLAMFWELHNPTQGMRQGNDVGTQYRSAIYCTSPQQLEEAKASRDAFQAELNKAGYGEITTEIDQAPTVYFAEAYHQQYLAKNPDGYCGIGGTGVCLPPSLQGN

Annotated regions:
phrase: AIFGLGCFWGAERRFWQREGVVSTVVGYAGGFTPNPTYEEVCSGLTGHTEVVLVVFDKDKVSYRELLAMFWELHNPTQGMRQGNDVGTQYRSAIYCTSPQQLEEAKASRDAFQAELNKAGYGEITTEIDQAPTVYFAEAYHQQYLAKNPDGY
type: DOMAIN
name: Met_Sox_Rdtase_MsrA_dom
description: Peptide methionine sulphoxide reductase MsrA domain

phrase: AIFGLGCFWGAERRFWQREGVVSTVVGYAGGFTPNPTYEEVCSGLTGHTEVVLVVFDKDKVSYRELLAMFWELHNPTQGMRQGNDVGTQYRSAIYCTSPQQLEEAKASRDAFQAELNKAGYGEITTEIDQAPTVYFAEAYHQQYLAKNPDGY
type: DOMAIN
name: Met_Sox_Rdtase_MsrA_dom
description: Peptide methionine sulphoxide reductase MsrA domain

phrase: IDFAIFGLGCFWGAERRFWQREGVVSTVVGYAGGFTPNPTYEEVCSGLTGHTEVVLVVFDKDKVSYRELLAMFWELHNPTQGMRQGNDVGTQYRSAIYCTSPQQLEEAKASRDAFQAELNKAGYGEITTEIDQAPTVYFAEAYHQQYLAKNPDGYCGIGGT
type: DOMAIN
name: Met_Sox_Rdtase_MsrA_dom
description: Peptide methionine sulphoxide reductase MsrA domain
Protein sequence:
MTTSLDTVETFGTTSYYDDVGLLCEKADTRALMAQFVPPLYSLVFTVGLLGNVVVVMILIKYRRLRIMTNIYLLNLAISDLLFLVTLPFWIHYVRGHNWVFGHGMCKLLSGFYHTGLYSEIFFIILLTIDRYLAIVHAVFALRARTVTFGVITSIVTWGLAVLAALPEFIFYETEELFEETLCSALYPEDTVYSWRHFHTLRMTIFCLVLPLLVMAICYTGIIKTLLRCPSKKKYKAIRLIFVIMAVFFIFWTPYNVAILLSSYQSILFGNDCERSKHLDLVMLVTEVIAYSHCCMNPVIYAFVGERFRKYLRHFFHRHLLMHLGRYIPFLPSEKLERTSSVSPSTAEPELSIVF

Annotated regions:
phrase: GNVVVVMILIKYRRLRIMTNIYLLNLAISDLLFLVTLPFWIHYVRGHNWVFGHGMCKLLSGFYHTGLYSEIFFIILLTIDRYLAIVHAVFALRARTVTFGVITSIVTWGLAVLAALPEFIFYETEELFEETLCSALYPEDTVYSWRHFHTLRMTIFCLVLPLLVMAICYTGIIKTLLRCPSKKKYKAIRLIFVIMAVFFIFWTPYNVAILLSSYQSILFGNDCERSKHLDLVMLVTEVIAYSHCCMNPVI
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM