nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MPKVTKIEVQKKNKERFNLYLDESFEMGIDMDTLVHFNLKKGDVLTAANMEDIQKYEHFRFGLHLAIQYLSYRKRTEQEVVQHLQKHEISESAIAEVIDYCNREGYIDHEDYAESLKNTMIRTTDKGPEIFRQKLIKAGIEKSLVENYTAKYEEEQPLEDVEILADKLLHQKKGPKKKRIDKVKQSLLQKGYSFEVINEAMQNLDFEPDSEEIDLLLQRELEKVFRKYERKYEGRQLEMKTIEALLRKGYEYDTIKDKMRESGIGDE

Annotated regions:
phrase: LAIQYLSYRKRTEQEVVQHLQKHEISESAIAEVIDY
type: DOMAIN
name: RecX_HTH_1st
description: RecX, first three-helical domain

phrase: EEQPLEDVEILADKLLHQKKGPKKKRIDKVKQSLLQKGYSFEVINEA
type: DOMAIN
name: RecX_HTH_3rd
description: RecX, third three-helical domain

phrase: LQRELEKVFRKYERKYEGRQLEMKTIEALLRKGYEYDTIK
type: DOMAIN
name: RecX_HTH_3rd
description: RecX, third three-helical domain
Protein sequence:
MGEEARALDMEEISDNTTRRNDVVHDLMVDLYPLSSYYFGSKEALRVKDEIISDRVIRLKSNYAAHGLRTCVEAVLLVELFKHPHVLLLQYRNSIFKLPGGRLRPGESDIEGLKRKLASKLSVNENVGVSGYEVGECIGMWWRPNFETLMYPFLPPNIKHPKECTKLFLVRLPVHQQFVVPKNFKLLAVPLCQLHENEKTYGPIMSQIPKLLSKFSFNMMEI

Annotated regions:
Protein sequence:
MNPIHLDTLLTIIDEGSFENASLALSISPSAVSQRIKALEKSVGRVLVSRTQPAVATEAGEVLVQAARKMALLQAETREQLAERLDEIPLTVAINADSLSTWFPPVFAEVAHWGAVTLTLRVEDEAHTLSLLRRGSVLGAVTREADPVAGCEVLRLGVMRHLPVATPELRARYTVDGQPDWVRMPVLRFGPNDVLQDRDLEGRVDGAVARRRVSVVPSAEGFGEAVRLGLGWGLLPEAQAAPMLAAGDVVQLDEKVVDTPLYWQRWRLESRLLARLTDAVVDAARAGLRT

Annotated regions:
phrase: LTVAINADSLSTWFPPVFAEVAHWGAVTLTLRVEDEAHTLSLLRRGSVLGAVTREADPVAGCEVLRLGVMRHLPVATPELRARYTVDGQPDWVRMPVLRFGPNDVLQDRDLEGRVDGAVARRRVSVVPSAEGFGEAVRLGLGWGLLPEAQAAPMLAAGDVVQLDEKVVDTPLYWQRWRLESRLLARLTDAVVD
type: DOMAIN
name: LysR_subst-bd
description: LysR, substrate-binding

phrase: HLDTLLTIIDEGSFENASLALSISPSAVSQRIKALEKSVGRVLVSRTQPAVATEAG
type: DOMAIN
name: Tscrpt_reg_HTH_LysR
description: Transcription regulator HTH, LysR

phrase: MNPIHLDTLLTIIDEGSFENASLALSISPSAVSQRIKALEKSVGRVLVSRTQPAVA
type: DOMAIN
name: Tscrpt_reg_HTH_LysR
description: Transcription regulator HTH, LysR
Protein sequence:
MTDATVAKIPHVLVIMDGIGHREAIKDNAFLAAKTPSLSMMKQKHPHSLISGSGEDVGLPDGQMGNSEVGHMNLGAGRVLYQDFTRITKDIRDGVFFEHEVLVDAVEKAKAVHGAVHIMGLLSEGGVHSHEDHIVAMCELALKRGATVYLHAFLDGRDTPPKSAQPSLEKLDALFAQYPEQGRIVSMIGRYFAMDRDNRWDRVEQAYRLLTESEAVRTAQSAVQGLELAYAAGESDEFVKATRIGDAVAVQDGDSIVFMNFRADRARELTRAFVEHDFSGFTRQRIPHLSKFVMLTRYQATIDAPVAYMPEALHNSIGEYLSNLGKTQLRIAETEKYAHVTFFFSGGREDEYPGEKRILIPSPNVATYDLKPEMSAYEVTDQLVNAIDSGEFDLLVVNYANGDMVGHTGIFDAAVKAVEAVDTCLGRVYQAVMAKHGHMIITADHGNVEQMQDYQSGQVHTQHTTELVPFIYVGPTQAVIAEGGVLADVAPTLLNLMQLPVPAEMQGRNLITLSS

Annotated regions:
phrase: ITKDIRDGVFFEHEVLVDAVEKAKAVHGAVHIMGLLSEGGVHSHEDHIVAMCELALKRGATVYLHAFLDGRDTPPKSAQPSLEKLDALFAQYPEQGRIVSMIGRYFAMDRDNRWDRVEQAYRLLTESEAVRTAQSAVQGLELAYAAGESDEFVKATRIGDAVAVQDGDSIVFMNFRADRARELTRAFVEHDFSGFTRQRIPHLSKFVMLTRY
type: DOMAIN
name: BPG-indep_PGM_N
description: BPG-independent PGAM, N-terminal

phrase: PHVLVIMDGIGHREAIKDNAFLAAKTPSLSMMKQKHPHSLISGSGEDVGLPDGQMGNSEVGHMNLGAGRVLYQDFTRITKDIRDGVFFEHEVLVDAVEKAKAVHGAVHIMGLLSEGGVHSHEDHIVAMCELALKRGATVYLHAFLDGRDTPPKSAQPSLEKLDALFAQYPEQGRIVSMIGRYFAMDRDNRWDRVEQAYRLLTESEAVRTAQSAVQGLELAYAAGESDEFVKATRIGDAVAVQDGDSIVFMNFRADRARELTRAFVEHDFSGFTRQRIPHLSKFVMLTRYQATIDAPVAYMPEALHNSIGEYLSNLGKTQLRIAETEKYAHVTFFFSGGREDEYPGEKRILIPSPNVATYDLKPEMSAYEVTDQLVNAIDSGEFDLLVVNYANGDMVGHTGIFDAAVKAVEAVDTCLGRVYQAVMAKHGHMIITADHGNVEQMQDYQSGQVHTQHTTELVPFIYVGPTQAVIAEGGVLADVAPTLLNLMQ
type: DOMAIN
name: Metalloenzyme
description: Metalloenzyme
Protein sequence:
MRMALCLEYDGSRYYGWQRQREVASVQQCVEEALSKIANAPVEVTCAGRTDAGVHATAQIVHFDVPVPRADVAWTLGVNSNLPAGIAVRWAREVDSEFSARFSATSRRYRYIIANTRFRPGIHSAGVSHYHQPLDAEVMQEAAQALVGEHDFTAFRASHCQSHTPFRKVSDLTVERRGDYIIVDISANAFLHHMVRNIVGSLIVVGQHLQPPDWIGELLRQKDRTKAAATAKPGGLYLVAVTYPEHYNIPDAPLGPLWLGD

Annotated regions:
phrase: AAQALVGEHDFTAFRASHCQSHTPFRKVSDLTVERRGDYIIVDISANAFLHHMVRNIVGSLIVVGQHLQPPDWIGELLRQKDRTKAAATAKPGGLYLVAVTY
type: DOMAIN
name: PsdUridine_synth_TruA_a/b_dom
description: Pseudouridine synthase I, TruA, alpha/beta domain

phrase: LEYDGSRYYGWQRQREVASVQQCVEEALSKIANAPVEVTCAGRTDAGVHATAQIVHFDVPVPRADVAWTLGVNSNLPAGIAVRWAREVDSEFSAR
type: DOMAIN
name: PsdUridine_synth_TruA_a/b_dom
description: Pseudouridine synthase I, TruA, alpha/beta domain
Protein sequence:
MTLTGKVKWFNSEKGFGFIEVADGNDVFVHFSAITGDGFKSLDEGQEVSFEVEEGNRGPQAKNVVKL

Annotated regions:
phrase: TLTGKVKWFNSEKGFGFIEVADGNDVFVHFSAITGDGFKSLDEGQEVSFEVEEGNRGPQAKNVV
type: DOMAIN
name: CSP_DNA-bd
description: Cold-shock protein Csp, DNA-binding

phrase: TGKVKWFNSEKGFGFIEVADGNDVFVHFSAITGDGFKSLDEGQEVSFEVEEGNRGPQAKNVV
type: DOMAIN
name: CSP_DNA-bd
description: Cold-shock protein Csp, DNA-binding

phrase: FGFIEVADGNDVFVHFSA
type: CONSERVED_SITE
name: CSD_CS
description: Cold-shock domain, conserved site

phrase: GKVKWFNSEKGFGFI
type: DOMAIN
name: CSP_DNA-bd
description: Cold-shock protein Csp, DNA-binding

phrase: NDVFVHFSA
type: DOMAIN
name: CSP_DNA-bd
description: Cold-shock protein Csp, DNA-binding

phrase: KSLDEGQEVSFEVEEGNR
type: DOMAIN
name: CSP_DNA-bd
description: Cold-shock protein Csp, DNA-binding

phrase: TGKVKWFNSEKGFGFIEVADGNDVFVHFSAITGDGFKSLDEGQEVSFEVEEGNRGPQAKNVVK
type: DOMAIN
name: CSD
description: Cold-shock domain

phrase: TGKVKWFNSEKGFGFIEVADGNDVFVHFSAITGDGFKSLDEGQEVSFEVEEGNRGPQAKNVV
type: DOMAIN
name: CSP_DNA-bd
description: Cold-shock protein Csp, DNA-binding
Protein sequence:
MNRFVKGIILLSIAAFFAECLEFVVNMILARELGEHGMGLYMSILPTIFLIIVIASLELPISISKFIAESNPKLHESMLRHAFRMTAIFTAFSTAAASIALPFIPVFDTYHPFIKGIVIGLIPVVAFTSIARGYFMGVQKMGKIAIANVLKKIIQLLCLFLFFQWYSFELDMAVLISLFVLVVSDVVVLVYLYSQFIMARRALSGQQHIHLRGKDVRKRLLAVSIPTTGLRIFHAVVNAIEPFLVKGALLAAGVAGTAAIDQYGMLAGVAVTIGSFPAFIAHSLMVVMIPSISEAYALSQYDIVLKRLKQSIFITLGYGIPAVWVMFQFAGPLTHLFFHSPEAQYYLQLLWPYFLFHLFVMPLQACLIGMGFVKEAFYHNVWSHIVALSMMYVLGSMENLQMLGIILGMNTGMILLTSLHYATICKALKVSVFLTGGTRTPRIEG

Annotated regions:
Protein sequence:
MDLTNYIASIKDYPKAGITFRDISPLMADGKAYSYAIREIAQYACDKDIDMVVGPEARGFIIGCPVAVELGIGFAPVRKPGKLPRDVVSADYEKEYGLDTLTMHADAIKPGQRVLIVDDLLATGGTVKATIEMIEKLGGIVAGCAFLIELEGLNGRHAIRNYDYKVLMQFPG

Annotated regions:
phrase: AIREIAQYACDKDIDMVVGPEARGFIIGCPVAVELGIGFAPVRKPGKLPRDVVSADYEKEYGLDTLTMHADAIKPGQRVLIVDDLLATGGTVKATIEMIEKLGGIVAGCAFLIELEGLNG
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: AIREIAQYACDKDIDMVVGPEARGFIIGCPVAVELGIGFAPVRKPGKLPRDVVSADYEKEYGLDTLTMHADAIKPGQRVLIVDDLLATGGTVKATIEMIEKLGGIVAGCAFLIELEGLNGRHAIRNYDYKV
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain
Protein sequence:
MPKSKRARVYHLTQVNKKGREAKERLFSNIRETIPKYQHCFVFSVDNMRNNYLKDVRHELNDCRIFFGKTKLMARALGTTPEEEQADGLHRLTRYLTGTVGLLFTNRDPADIESYFSNLSQVDFARAGTVAPRTVTVPPGIVYSTGGEVPPEHDVPVSHTLEPELRRLGMPVRMIKGKVCLGDEKGEASEGYTICKEGEVLDSRQTRLLKLFSICLSEFKVSLLGYWSSASGEVTELEAGKTRPKREGNRRQAMNGDEMDEDQSSDEDSD

Annotated regions:
phrase: ARAGTVAPRTVTVPPGIVYSTGGEVPPEHDVPVSHTLEPELRRLGMPVRMIKGKVCLGDEKGEASEGYTICKEGEVLDSRQTRLLKLFS
type: DOMAIN
name: Ribosomal_uL10-like_insert
description: Large ribosomal subunit protein uL10-like, insertion domain
Protein sequence:
MIQAQTMLKVADNSGAKEIMCVRVLGGSKRKWGNIGDIIVASVKSATPGGVVKKGEVVKAVVVRSAKGLRRADGSYIKFDENAAVLIKDDKQPRGTRIFGPVARELRDKDFNKILSLAPEVL

Annotated regions:
phrase: AVVVRSAKGLRRADGSYIKFDENAAV
type: CONSERVED_SITE
name: Ribosomal_uL14_CS
description: Large ribosomal subunit protein uL14, conserved site
Protein sequence:
MDILNDISIAAPEALLIGVALIGVLLGATFKQSFNGLSRLLGALALAGAAFLAASQSAVDASTAFNGLYKVTPFIAIAKAVSYGVGAIALLVAGGYLHRENMNKFEYTLLVMFGSAGMGVMLSANNLMTLYMGIETLSLSSYVLAAFNRDSRRSAEAGLKYFVLGALASGLLLFGCSLVYGYTGFASFEQIAAADQSIGLTFGLVLILMALSFKASAAPFHVWTPDVYEGAPTPVVTFFSTAPKLATVAVLANIMFTVFGVYEESWMLIIAIVSAISMLVGAFGGLAQNNIKRLLAYSSIANVGYALMGVAAGEVNGAASVLTYMTIYVITTLGMFGIVLAMRRRDGQVEEISDLNGLSTSRPGLAVAMTVLVFSVAGIPPMAGFLGKWVVFEAALKSELYWLVAVGVIGSVVSLGYYLRLIWAMWAKTSDEEALEPADGMVSVSIYGATILAFPVLVIWIGWMTGIIGTAAAAG

Annotated regions:
phrase: ANNLMTLYMGIETLSLSSYVLAAFNRDSRRSAEAGLKYFVLGALASGLLLFGCSLVYGYTGFASFEQIAAADQSIGLTFGLVLILMALSFKASAAPFHVWTPDVYEGAPTPVVTFFSTAPKLATVAVLANIMFTVFGVYEESWMLIIAIVSAISMLVGAFGGLAQNNIKRLLAYSSIANVGYALMGVAAGEVNGAASVLTYMTIYVITTLGMFGIVLAMRRRDGQVEEISDLNGLSTSRPGLAVAMTVLVFSVAGIPPMAGFLGKWVVFEAALKSELYWLVAVGVIGSV
type: DOMAIN
name: ND/Mrp_TM
description: NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domain
Protein sequence:
MAEKTYPMTLEEKEKLEKELEELKLVRRPEVVERIKIARSYGDLSENSEYEAAKDEQAFVEGQISSLETKIRYAEIVNSDAVAKDEVAIGKTVTIQEVGESEEEVYIIVGSAGADAFAGKVSNESPIGQALIGKKTGDTATVETPVGSYDVKILKVEKTV

Annotated regions:
phrase: PMTLEEKEKLEKELEELKLVRRPEVVERIKIARSYGDLSENSEYEAAKDEQAFVEGQISSLETKIRYAE
type: DOMAIN
name: Tscrpt_elong_fac_GreA/B_N
description: Transcription elongation factor, GreA/GreB, N-terminal

phrase: SNESPIGQALIGKKTG
type: CONSERVED_SITE
name: TF_GreA/GreB_CS
description: Transcription elongation factor, GreA/GreB, conserved site

phrase: KDEVAIGKTVTIQEVGESEEEVYIIVGSAGADAFAGKVSNESPIGQALIGKKTGDTATVETPVGSYDVKILKV
type: DOMAIN
name: Tscrpt_elong_fac_GreA/B_C
description: Transcription elongation factor, GreA/GreB, C-terminal

phrase: ELEELKLVRRPEVVERIKIARSYGDLSENSE
type: CONSERVED_SITE
name: TF_GreA/GreB_CS
description: Transcription elongation factor, GreA/GreB, conserved site
Protein sequence:
MGIKHLFQVIQENAPDAIKAGDIKNHFGRKVAIDASMSIYSFLIAVRSEGQQLMSESGETTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRTARKAEATEAHEEAKETGTAEDVEKFSRRTVRVTREHNAECKKLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLCFEAPILLRHLTFSEQRKEPIQEIHLNRALEGLGMDRKQFIDLCILLGCDYLEPIPKVGPNTALKLIREHGSLEKVVEAIENDPKKKYVIPEYWPYQDARELFLHPDVREADHPECDFKWEAPDVEALVEFLVKDKGFNEDRVRNGATRLQKNLKTAQQSRLEGFFKPVARTDEEKASLKRKHDEKLQEQKKRKKEEAKAKKEAKAKPRGAA

Annotated regions:
phrase: IKPLYVFDGAPPKL
type: CONSERVED_SITE
name: XPG_CS
description: XPG conserved site

phrase: KLMGIPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLCFEAPILLRHLTFSEQRKEPIQEIHLNRALEGLG
type: DOMAIN
name: XPG-I_dom
description: XPG-I domain

phrase: RKQFIDLCILLGCDYLEPIPKVGPNTALKLIRE
type: CONSERVED_SITE
name: HhH2
description: Helix-hairpin-helix motif, class 2

phrase: MGIKHLFQVIQENAPDAIKAGDIKNHFGRKVAIDASMSIYSFLIAVRSEGQQLMSESGETTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRTARKAE
type: DOMAIN
name: XPG_DNA_repair_N
description: XPG, N-terminal

phrase: GIPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLCFEAPILLRHLTFSEQRKEPIQEIHLNRALEGLGMDRKQFIDLCILLGC
type: DOMAIN
name: XPG-I_dom
description: XPG-I domain

phrase: MGIKHLFQVIQENAPDAIKAGDIKNHFGRKVAIDASMSIYSFLIAVRSEGQQLMSESGETTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRTARKAE
type: DOMAIN
name: XPG_DNA_repair_N
description: XPG, N-terminal

phrase: GIPYIDAPTEAEAQ
type: CONSERVED_SITE
name: XPG_CS
description: XPG conserved site
Protein sequence:
MNNLKVWLLMAALSAILVLIGGAIGGKSGALLFFLISLGMNLFSYYYSDKVAISMTRSRPVSEEEAPGLYDVVRRLTKRAGLPMPRLYITPSPQPNAFATGRNPAHSAVAVTEGLLRLLNQSELEGVLAHELAHIKNRDVLIGTIAAAFAGAITMISNIVQWGAFFGMGQDDEEGGGGSFIASLLLALIAPVAAMIIQLAISRSREYLADETGARMAGNSGGLANALLKLDSAARRIPMQVNPAASHLFIVNPLSGESIARLFSTHPPISERVKRLNAMAI

Annotated regions:
phrase: PGLYDVVRRLTKRAGLPMPRLYITPSPQPNAFATGRNPAHSAVAVTEGLLRLLNQSELEGVLAHELAHIKNRDVLIGTIAAAFAGAITMISNIVQWGAFFGMGQDDEEGGGGSFIASLLLALIAPVAAMIIQLAISRSREYLADETGARMAGNSGGLANALLKLDSAARRIPMQVNPAASHLFIVNPLSGESIARLFSTHPPISERVKRLNA
type: DOMAIN
name: Peptidase_M48
description: Peptidase M48
Protein sequence:
MNPNQFTENTISAINLAVDISKGNMQQSIKPEALALGLLMQNNGLIPRVIEKMGLNLQYIISELEKEMNNYPKVEVKVSNENISLDQKTNSILNRAEKIMNEMEDSFLSVEHIFKAMIEEMPIFKRFGISLEKYMEVLMNIRGNRKVDNQNPEATYEVLEKYAKDLVELAREGKIDPIIGRDSEIRRAIQIISRRTKNDPILIGEPGVGKTAIVEGLAQRILNGDVPESLKNKKIFSLDMGALVAGAKYKGEFEERMKGVLKEVEESNGNIILFIDEIHTIVGAGKGEGSLDAGNMLKPMLARGELRVIGATTIDEYRKYIEKDPALERRFQTILVNEPNVDDTISILRGLKDKFETYHGVRITDTAIVEAATLSQRYISDRKLPDKAIDLIDEAAAMIRTEIDSMPEELDQLTRKALQLEIEIKALEKETDDASKERLKVIEKELAELNEEKKVLTSKWELEKEDISKIKNIKREIENVKLEMEKAEREYDLTKLSELKYGKLATLEKELQEQQNKVDKDGKENSLLKQEVTADEIADIVSRWTGIPVSKLTETKKEKMLHLEDHIKERVKGQDEAIKSVADTMLRSVAGLKDPNRPMGSFIFLGPTGVGKTYLAKTLAYNLFDSEDNVVRIDMSEYMDKFSVTRLIGAPPGYVGYEEGGQLTEAIRTKPYSVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRIVDFKNTLIIMTSNIGSHFILEDPNLSEDTREKVADELKARFKPEFLNRIDEIITFKALDLPAIKEIVKLSLKDLENKLKPKHITLEFSDKMVDYLANNAYDPHYGARPLRRYIQREIETSLAKKILANEVHEKSNVLIDLDNNHIVFKEV

Annotated regions:
phrase: PMGSFIFLGPTGVGKTYLAKTLAYNLFDSEDNVVRIDMSEYMDKFSVTRLIGAPPGYVGYEEGGQLTEAIRTKPYSVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRIVDFKNTLIIMTSNIGSHFILEDPNLSEDTREKVADELKA
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: TKNDPILIGEPGVGKTAIVEGLAQRILNGDVPESLKNKKIFSLDMGALVAGAKYKGEFEERMKGVLKEVEESNGNIILFIDEIHTIVGAGKGEGSLDAGNMLKPMLARGELRVIGATTIDEYRKYIEKDPALERRFQTILVNEPNV
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VDDTISILRGLKDKFETYHGVRITDTAIVEAATLSQRYISDRKLPDKAIDLIDEAAAMIRTEIDSMPEELDQLTRKALQLEIEIKALEKETDDASKERLK
type: DOMAIN
name: ClpA/ClpB_AAA_lid
description: ClpA/ClpB, AAA lid domain

phrase: RIDMSEYMDKFSVTRLIG
type: CONSERVED_SITE
name: ClpA/B_CS2
description: ClpA/B, conserved site 2

phrase: AEKIMNEMEDSFLSVEHIFKAMIEEMPIFKRFGISLEKYMEVLMNIR
type: DOMAIN
name: Clp_R_dom
description: Clp, repeat (R) domain

phrase: AVDISKGNMQQSIKPEALALGLLMQNNGLIPRVIEKMGLNLQYIISELEKE
type: DOMAIN
name: Clp_R_dom
description: Clp, repeat (R) domain

phrase: LDLPAIKEIVKLSLKDLENKLKPKHITLEFSDKMVDYLANNAYDPHYGARPLRRYIQREIETSLAKKILANEVHEKSNVLIDLDNNHIV
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal

phrase: LDLPAIKEIVKLSLKDLENKLKPKHITLEFSDKMVDYLANNAYDPHYGARPLRRYIQREIETSLAKKILANEVHEKSNV
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal

phrase: RPMGSFIFLGPTGVGKTYLAKTLAYNLFDSEDNVVRIDMSEYMDKFSVTRLIGAPPGYVGYEEGGQLTEAIRTKPYSVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRIVDFKNTLIIMTSNIGSHFILEDPNLSEDTREKVADELKARFKPEFLNRIDE
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: PNQFTENTISAINLAVDISKGNMQQSIKPEALALGLLMQNNGLIPRVIEKMGLNLQYIISELEKEMNNYPKVEVKVSNENISLDQKTNSILNRAEKIMNEMEDSFLSVEHIFKAMIEEMPIFKRFGISLEKYMEVLMNIRG
type: DOMAIN
name: Clp_R_dom
description: Clp, repeat (R) domain

phrase: DAGNMLKPMLAR
type: CONSERVED_SITE
name: ClpA/B_CS1
description: ClpA/B, conserved site 1

phrase: ILIGEPGVGKTAIVEGLAQRILNGDVPESLKNKKIFSLDMGALVAGAKYKGEFEERMKGVLKEVEESNGNIILFIDEIHTIVGAGKGEGSLDAGNMLKPMLARGELRVIGATTIDEYRKYIEKDPALERRFQT
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core
Protein sequence:
MATPREIKKRINSVKNTRKITRTMEMVSTAKSKKISDRVNASHPFSNKIKELVSSLASLGGVVHSPYLRRPEKIKTVALLIITANRGLCGGYNSNVNRMAKAKIQEWKKSGVNVRLFIVGKKGISFFKFAGEKAEKTYTHLDDKSGYREAEEFANLFLELFAKEEVDVVEIASTVYYSSASQKPEVTRVLPLEPAGEGSVSDMMVYEPSPEKVLESLLPLVVKTAFLKAILEANCSEQIARRIAMKSATDAASEMIKLLTRGYNRVRQAKITQEISEIVAGADSLN

Annotated regions:
phrase: ITQEISEIVAGAD
type: CONSERVED_SITE
name: ATP_synth_F1_gsu_CS
description: ATP synthase, F1 complex, gamma subunit conserved site
Protein sequence:
MSYTHRRSCISGLFLLLLALSCEANSGFIGVKDSHFELNGSPFLFNGFNSYWLMHVAADPAERYKVTEVLKDASTAGLSVCRTWAFSDGGDRALQISPGVYDERVFQGLDFVIAEAKKYGVRLILSFVNQWNDFGGKAEYVWWARNAGVQISNDDEFYTHPILKKYLKNHIEVVTRLNSITKVAYKDDATIMAWELMNEPRDQADYSGKTVNVGWVQEMASFVKSLDNKHLLEVGMEGFYGDSIPERKLVNPGYQVGTDFISNHLINEIDFATIHAYTDQWLSGQSDEAQLAWMEKWIRSHWEDARNILKKPLVLAEFGKSSRSGEGSRDIFMSSVYRNVYNLAKEGGTMGGSLVWQLMAHGMENYDDGYSIVLGLNPSTTQIISNQAHIMTALAHSLNHE

Annotated regions:
phrase: NGSPFLFNGFNSYWLMHVAADPAERYKVTEVLKDASTAGLSVCRTWAFSDGGDRALQISPGVYDERVFQGLDFVIAEAKKYGVRLILSFVNQWNDFGGKAEYVWWARNAGVQISNDDEFYTHPILKKYLKNHIEVVTRLNSITKVAYKDDATIMAWELMNEPRDQADYSGKTVNVGWVQEMASFVKSLDNKHLLEVGMEGFYGDSIPERKLVNPGYQVGTDFISNHLINEIDFATIHAYTDQWLSGQSDEAQLAWMEKWIRSHWEDARNILKKPLVLAEFGKSSRSGEGSR
type: DOMAIN
name: Glyco_hydro_5
description: Glycoside hydrolase, family 5
Protein sequence:
MAQFYSAKRRVTTRQIITVKVNDLDSFGQGVARHNGKALFIPGLLPEESAEVIITEDKKQFARARVSRRLNDSPERETPRCPHFGVCGGCQQQHVGIDLQQRSKSAALARLMKHEVNDIIAGASWGYRRRARLSLNCPPDKPLQMGFRKAGSSDIVNVEQCPVLAPQLEALLPRIRACLASLHGTRHLGHVELVQAGSGTLMILRHTAPLSAADKEKLERFSHSEGLSLFLAPFSEILETVSGEAPWYDSHGLRLTFSPRDFIQVNEAVNQQMVARALEWLDVRAEDRVLDLFCGMGNFTLPLATRAASVVGVEGVQALVEKGRENAIRNGLHNVTFFHENLEEDVTKQPWAKNGFDKVLLDPARAGATGVMRHIIKLKPIRIVYVSCNPATLARDSEALVNAGYEVTRLAMLDMFPHTGHLESMVLFERM

Annotated regions:
phrase: RVTTRQIITVKVNDLDSFGQGVARHNGKALFIPGLLPEESAEVIITEDKKQFARARVS
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: DPARAGATGVMRHIIKLKPIRIVYVSCNPA
type: ACTIVE_SITE
name: MeTrfase_TrmA_AS
description: RNA methyltransferase TrmA, active site

phrase: VTTRQIITVKVNDLDSFGQGVARHNGKALFIPGLLPEESAEVIITEDKKQFARAR
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: LDMFPHTGHL
type: CONSERVED_SITE
name: MeTrfase_TrmA_CS
description: RNA methyltransferase TrmA, conserved site
Protein sequence:
MHTLVFLSTRQVLQCQPAACQALPLLPRELFPLLFKVAFMDKKTLVLRELVHTWPFPLLSFQQLLQECAHCSRALLQERLSTESMQAVILGLTARIHTQETEAGTQPLCRKHALRVLDMTGLLDDGVEQDPETMSMWDCTAAVARTCIAQQQGGTAEPGLSPVPVEIRVDLRVNRASYTFLREALQSSVASPLRLCCRDLRAEDLPMRNTVALLQLLDAGCLRRIDLRFNNLGLRGLSVIIPHVARFQHLASLRLHYVHGDSRQPSVDGEDNFRYFLAQMGRFMCLRELSMGSSLLSGRLDQLLSTLQRPLESLELAFCALLPEDLRFLAQSSHAAHLKKLDLSGNDLSGNQLTPFQGLLQAVATTLLHLELTECQLADAQLLATLPTLTRCASLRYLGLYGNPLSMAGLKELLRDSVVQAELRTVVHPFPVDCYEGLPWPPPASVLLEASINEEKFARVEAELHQLLLASGRAHVLWTTDIYGRLAADYFSL

Annotated regions:
phrase: AAHLKKLDLSGNDLS
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: CLRRIDLRFNNLGLRGLSV
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat
Protein sequence:
MTALSALIEQKLQSLGTILCQSFPELSPEKIHEAIQQNSNHPELPVYQLGYAIAMSDFVEKVLQKYPHLVKQWWEKSPCFADCTAYIERLNKELANVHDETALYQTLRQFRNIEMAKLSFCQSLNLATVEEIFVQLSQLAESLIIAARDWLYHQACAEIGTPMDEQGNPQQLYILGMGKLGGFELNFSSDIDLIFTYPSQGETSVENTNARRSVDNGKFFTRLGQRLISALDEFTSDGFVYRTDMRLRPFGDSGVLVLSFSAMEQYYQDQGRDWERYAMIKGRVLGAQTKDPNVSKLKKMLRPFVYRRYIDFSVIQSLREMKGKIEREVRRRGLKDNIKLGAGGIREVEFIVQVFQLIRGGREINLQQHSLLKILPEITKLRLITEQQFHDLRESYIFLRRVENILQAINDQQTQTLPTDEIDQIRLVEACKTFTCLNENNQTIEKHYPIENWDDFYRTLQQKQEKVRAVFTQLIGDEQDESSQTDSQWQDFLEADFEDIEQTLLESSVSENNIDEVLEKLAQFKDGLNHRVIGSRGRDVLSHLMPTVLALIFEQENYRTLLPRILNIIEKISSRTTYLELLLENPRALQQVIELCAQSQLISEQLAHYPILLDELLNTEALRHPLPFTQYPAELHQYLLRLPPDDEEQLIDALRQFKQATLLKVAAADILGALPVMKVSDHLTYLAEAIIEVVVNLAWKQVSSRFGVPEHLQNNEKGFLVIGYGKLGGIELGYKSDLDLVFLYDAVESQTTGGKKVIDSNQFYLRLAQKIVSIFSINTSAGVLYEADMRLRPSGDAGLIGCSLSAFSHYQLNDAWTWEKQALVRARPVFGESSLKAKFEHIRQQVLSASRDIEQLKQDVVEMRKKMFAHLSHSKHSEFNLKTDRGGITDIEFIAQYLMLANAPKKPQLTKWSDNVRIFDDMAEAKIISQTDCDTLKQCYVDLRNTIHHLNLLGKSSVVEDSEFVKERSFIQAFWDRLFVS

Annotated regions:
phrase: REMKGKIEREVRRRGLKDNIKLGAGGIREVEFIVQVFQLIRGGREINLQQHSLLKILPEITKLRLITEQQFHDLRESYIFLRRVENILQAINDQQTQTLPTDEIDQIRLVEACKTFTCLNENNQTIEKHYPIENWDDFYRTLQQKQEKVRAVFTQL
type: DOMAIN
name: PII_UdlTrfase/GS_AdlTrfase
description: PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase

phrase: MRKKMFAHLSHSKHSEFNLKTDRGGITDIEFIAQYLMLANAPKKPQLTKWSDNVRIFDDMAEAKIISQTDCDTLKQCYVDLRNTIHHLNLLG
type: DOMAIN
name: PII_UdlTrfase/GS_AdlTrfase
description: PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase

phrase: YQLGYAIAMSDFVEKVLQKYPHLVKQWWEKSPCFADCTAYIERLNKELANVHDETALYQTLRQFRNIEMAKLSFCQSLNLATVEEIFVQLSQLAESLIIAARDWLYHQACAEIGTPMDEQGNPQQLYILGMGKLGGFELNFSSDIDLIFTYPSQGETSVENTNARRSVDNGKFFTRLGQRLISALDEFTSDGFVYRTDMRLRPFGDSGVLVLSFSAMEQYYQDQGRDWERYAMIKGRVLGAQTKDPNVSK
type: DOMAIN
name: GlnE_rpt_dom
description: Glutamate-ammonia ligase adenylyltransferase, repeated domain

phrase: LQQVIELCAQSQLISEQLAHYPILLDELLNTEALRHPLPFTQYPAELHQYLLRLPPDDEEQLIDALRQFKQATLLKVAAADILGALPVMKVSDHLTYLAEAIIEVVVNLAWKQVSSRFGVPEHLQNNEKGFLVIGYGKLGGIELGYKSDLDLVFLYDAVESQTTGGKKVIDSNQFYLRLAQKIVSIFSINTSAGVLYEADMRLRPSGDAGLIGCSLSAFSHYQLNDAWTWEKQALVRARPVFGESSLKAKFE
type: DOMAIN
name: GlnE_rpt_dom
description: Glutamate-ammonia ligase adenylyltransferase, repeated domain
Protein sequence:
MSVLSGKRIVLGISGGIAAYKTATLVRLFIKAGADVRVVMTPAAKDFVTPLTLSTLSKNPVLSSFYNDDEQEANWNNHVELGLWADLMLIAPATANTLSKMATGNSDNFLVAVYLSAKCPVYFAPAMDLDMYKHPSTIESFSSLQGFGNIMIPAESGELASGLSGEGRMAEPENIISFIESDLESKLPLKGKKILVTAGPTYEAIDPVRFIGNHSSGKMGYDIAKTAASLGAQVTLVSGPTHLTLDKSNIEVVRVTSAREMYDACHAVYDDCDVAIAAAAVADYRPKNPALQKIKKTEANFVIELEKTKDILASLGEIKTKQFLIGFALETENEIENARLKIKKKNLDLIVLNSLRDEGAGFGHATNKITFIDKDFNEEVHELKTKEAVATDILNKVLAHYA

Annotated regions:
phrase: KRIVLGISGGIAAYKTATLVRLFIKAGADVRVVMTPAAKDFVTPLTLSTLSKNPVLSSFYNDDEQEANWNNHVELGLWADLMLIAPATANTLSKMATGNSDNFLVAVYLSAKCPVYFAPAMDLDMYKHPSTIESFSSLQGFGNIMIPAESGELASGLSGEGRMAEPENIISFI
type: DOMAIN
name: Flavoprotein
description: Flavoprotein

phrase: LKGKKILVTAGPTYEAIDPVRFIGNHSSGKMGYDIAKTAASLGAQVTLVSGPTHLTLDKSNIEVVRVTSAREMYDACHAVYDDCDVAIAAAAVADYRPKNPALQKIKKTEANFVIELEKTKDILASLGEIKTKQFLIGFALETENEIENARLKIKKKNLDLIVLNSLRDEGAGFGHATNKITF
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal
Protein sequence:
MPQVVEVLVEGGKASPGPPLGPAIGPLGLNVKQVVDEINKATKDFEGMQVPVKIIVEDPKKKTFRIEVGVPPVSQLIKKELGIPKGSSEAGHSPVGNLTMEQVIRIAKAKMDQMLAADLKAAAKEVIGTALSMGVTVEGKDPREVQKEIDEGVYDEIFANAEE

Annotated regions:
phrase: KEVIGTALSMGVTVE
type: CONSERVED_SITE
name: Ribosomal_uL11_CS
description: Large ribosomal subunit protein uL11, conserved site

phrase: VEVLVEGGKASPGPPLGPAIGPLGLNVKQVVDEINKATKDFEGMQVPVKIIVE
type: DOMAIN
name: Ribosomal_uL11_N
description: Large ribosomal subunit protein uL11, N-terminal

phrase: VPPVSQLIKKELGIPKGSSEAGHSPVGNLTMEQVIRIAKAKMDQMLAADLKAAAKEVIGTALSMGVT
type: DOMAIN
name: Ribosomal_uL11_C
description: Large ribosomal subunit protein uL11, C-terminal
Protein sequence:
MAAHRIRATTNNNTSLPRCKSEGTLIDLSEGVSEASLTDVKVPSPSALRLDATASFGAAREVVAIKDCCPSSFTTLKFSKGDRLYVLDSSGAEWWYAHNNTEMGYIPAAYVEPINYRDSSFSDSGMIDTVGDCNEEAAKEMDLLGEWAGVILKPTTFQNGNPFAATNSSTNPFLNGGPQSPLDQNSNEKSVDLLLFDTLAPSVPNSTSITADINGFGSGVLNMNPLSPTVGVGQTLRRDNPFFRSKRSYSLSELSILQAQSDAPQASTGFFGGLKAPAPEQFQSREDFRTAWLTHRKLARSCHDLDSLGQNPGWGQTQPVETNIVCRLDSSGGAVQLPDANISIHIPEGHVAPGDTQQISIKALLDPPLELNNDRCTTVSPVVEIKLSNMEIRTTVTLEMKVSVVVKIESRQTTEILCVRSDCKEGPYTPIPQAYIYGDMVQVCLDNLEPCMYVCVVAQSKSIAPDSTVWEHVVKKITLGVYGPKHIHPSFKTVVAMFGHDCAPKTLLVSEVGKQAQAVPPVALQLWGKHQFVLSRPQDLRVGVYSNMANYEVKASEQARVVRGFQVKLGKVSRLVYVIASRNADDVSDFTLRIQIKDDQDCILAQFCVQTPTPPPKAGPKTSVQRRFLKKKEVGKIVLSPLAITTKYPVFQDRRINNLKFGKLIKTVIRQTKNQYLLEYKKGDFVALLSEEKIRLKGQLWTKEWYIGYYQGRLGFVHAKNVLVVGKVKPIYFSGPDLTTSLFLEQILKPCKFLTYIYASVRTILMENIGNWRAFADSLGYINLPLTHFCRAELDSEPERVASVLEKLKEDCNNTESKERKSFQKELLTALLKMDCQGLVARLVMDFVLLTTAVELAGRWRELAEKLAKVSRQQMDAYEAPHRDKSGVVDSEAMWKPAYDFLVTWAAQIGDSYRDVIQELHMGLDKMKNPITKRWKHLTGTLILVNCMDALRSSAFSPAAQDDCAI

Annotated regions:
phrase: NNLKFGKLIKTVIRQTKNQYLLEYKKGDFVALLSEEKIRLKGQLWTKEWYIGYYQGRLGFVHAKNVLVVG
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: AIKDCCPSSFTTLKFSKGDRLYVLDSSGAEWWYAHNNTEMGYIP
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: REVVAIKDCCPSSFTTLKFSKGDRLYVLDSSGAEWWYAHNNTEMGYIPAAYVEPI
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: FGKLIKTVIRQTKNQYLLEYKKGDFVALLSEEKIRLKGQLWTKEWYIGYYQGRLGFVHAKNVL
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: GAAREVVAIKDCCPSSFTTLKFSKGDRLYVLDSSGAEWWYAHNNTEMGYIPAAYVEPIN
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: TNIVCRLDSSGGAVQLPDANISIHIPEGHVAPGDTQQISIKALLDPPLELNNDRCTTVSPVVEIKLSNMEIRTTVTLEMKVSVVVKIESRQTTEILCVRSDCKEGPYTPIPQAYIYGDMVQVCLDNLEPCMYVCV
type: DOMAIN
name: ZU5_dom
description: ZU5 domain

phrase: VKKITLGVYGPKHIHPSFKTVVAMFGHDCAPKTLLVSEVGKQAQAVPPVALQLWGKHQFVLSRPQDLRVGVYSNMANYEVKASEQARVVRGFQVKLGKVSRLVYVIASRNADDVSDFTLRIQIKDDQDCILAQFCVQTPTPPP
type: DOMAIN
name: UPA_SH3BP4
description: SH3BP4, UPA-like domain

phrase: LDSSGGAVQLPDANISIHIPEGHVAPGDTQQISIKALLDPPLELNNDRCTTVSPVVEIKLSNMEIRTTVTLEMK
type: DOMAIN
name: ZU5_dom
description: ZU5 domain

phrase: RLVMDFVLLTTAVELAGRWRELAEKLAKVSRQQMDAYEAPHRDKSGVVDSEAMWKPAYDFLVTWAAQIGDSYRDVIQELHMGLDKMKNPITKRWKHLTGTLILVNCMDA
type: DOMAIN
name: SH3BP4_C
description: SH3BP4, C-terminal helical domain

phrase: GKVKPIYFSGPDLTTSLFLEQILKPCKFLTYIYASVRTILMENIGNWRAFADSLGYINLPLTHFCRAELDSEPERVASVLEKLKEDCNNTESKERKSFQKELLTALL
type: DOMAIN
name: DEATH_SH3BP4
description: SH3BP4, DEATH domain-like
Protein sequence:
MGSASEDLLVTLQILPGFFSNCLFLALYDSVVLVKRVVALLSRSRSAGCGEWRRMLTSEGLRSIWNSFLLDAHKQVKLGCEAPNSKVVKVPDGPRWSSTVVPCGSRIQTGGECRLLDFESSDRPLVVNFGSATXPPFISHLPAFRQLVEDFSDVADFLLVYIDEAHPSDGWVAPQMGACSFSFRKHQNLEERIGAARKLIEHFSLPPQCQLVADCMDNNANVAYGVANERVCIVHQRKIAYLGGKGPFFYSLKDVRQWLELSYGRR

Annotated regions: