nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MNIFAAFEERIGEALATLTRAGQLPEGLDLGRVVVEPPRDPGHGDLATNAALVLAKEARTNPKALAELLAAELRQDPRVTEASVAGPGFLNLRLAPEVFAEVVRAALASGEAFGRGARRPGLVNVEYVSANPTGPMHVGHGRGAVFGDALANLLAASGREVVREYYINDAGAQVDVLARSAYLRYREALGDAIGAIPEGLYPGDYLKPVGRRLAETHGRALLREPESAWLPVVRDFAIAAMMDLIRDDLAALGIRHDVFFSERTLQGGGDGGAVGALIAELREKGLVYVGRLPPPKGQLPEDWEDRDQTLFRSTAFGDDIDRPLLKSDGTYTYFASDIAYHASKVARGATDLIDVLGADHGGYVKRMQAAVRAVSDGRASLDVKLCQLVRLLRGGEPVKMSKRAGEFVTLREVIDEVGRDPVRFMMLYRKNDATLDFDLAKVVEQSKDNPVFYVQYAHARTASVFRQAREAFPGEDLSPQALAGADLSLLRDSGEADIMRLVAQYPRVIEAAGSAHEPHRLAFYLYELASAFHSFWNKGKDLPQLRFVNQTDRKSTLSRLALVAALRGVLASGLGILGVTAPDEMR

Annotated regions:
phrase: VNVEYVSANPTGPMHVGHGRGAVFGDALANLLAASGREVVREYYINDAGAQVDVLARSAYLRYREALGDAIGAIPEGLYPGDYLKPVGRRLAETHGRALLREPESAWLPVVRDFAIAAMMDLIRDDLAALGIRHDVFFSERTLQGGGDGGAVGALIAELREKGLVYVGRLPPPKGQLPEDWEDRDQTLFRSTAFGDDIDRPLLKSDGTYTYFASDIAYHASKVARGATDLIDVLGADHGGYVKRMQAAVRAVSDGRASLDVKLCQLVRLLRGGEPVKMSKRA
type: DOMAIN
name: ArgRS_core
description: Arginyl-tRNA synthetase, catalytic core domain

phrase: RAALASGEAFGRGARRPGLVNVEYVSANPTGPMHVGHGRGAVFGDALANLLAASGREVVREYYINDAGAQVDVL
type: DOMAIN
name: ArgRS_core
description: Arginyl-tRNA synthetase, catalytic core domain

phrase: STAFGDDIDRPLLKSDGTYTYFASDIAYHASKVARGATDLIDVLGADHGGYVKRMQAAVRAVSDGRASLDVKLCQLVRLLRGGEPVKMSKRAGEFVTLREVIDEVGRDP
type: DOMAIN
name: ArgRS_core
description: Arginyl-tRNA synthetase, catalytic core domain

phrase: PTGPMHVGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: AAFEERIGEALATLTRAGQLPEGLDLGRVVVEPPRDPGHGDLATNAALVLAKEARTNPKALAELLAAELRQDPRVTEASVAGPGFLNLR
type: DOMAIN
name: Arg-tRNA-synth_N
description: Arginyl tRNA synthetase N-terminal domain

phrase: EERIGEALATLTRAGQLPEGLDLGRVVVEPPRDPGHGDLATNAALVLAKEARTNPKALAELLAAELRQDPRVTEASVAGPGFLNLR
type: DOMAIN
name: Arg-tRNA-synth_N
description: Arginyl tRNA synthetase N-terminal domain

phrase: VQYAHARTASVFRQAREAFPGEDLSPQALAGADLSLLRDSGEADIMRLVAQYPRVIEAAGSAHEPHRLAFYLYELASAFHSFWNKGKDLPQLRFVNQTDRKSTLSRLALVAALRGVLASGLGILGVTAPDE
type: DOMAIN
name: DALR_anticod-bd
description: DALR anticodon binding

phrase: VQYAHARTASVFRQAREAFPGEDLSPQALAGADLSLLRDSGEADIMRLVAQYPRVIEAAGSAHEPHRLAFYLYELASAFHSFWNKGKDLPQLRFVNQTDRKSTLSRLALVAALRGVLASGLGILGVTAPDE
type: DOMAIN
name: DALR_anticod-bd
description: DALR anticodon binding
Protein sequence:
MGIKGLTKFIADAAPNAIKEIKIENLMGRVVAIDASMSLYQFIIAIRDSEQYGNLTNESGETTSHISGLMSRSIKLMENGLKPIYVFDGAPPELKGSELEKRGEKRQKAEELLKKAKEEGNLEEIKKQSGRTVRVTRKQNEEAKKLLTLMGIPVVEAPCEAESQCAFLTKYNLAHATATEDADALVFGTKILIRNLNANASSANQNKNKNSSKRGYILTEINLEQVLKGLNLSMNEFIDFCILCGCDYCDTIKGIGSKTAYNLIKEYNSIEKIIENIDKNKYQVPSNFRFVEARDSFINPKVLPKEEVKIDWCEPKIEELKNFLIKDYNFNEVRVTNYINRLLKARKVTTQRRLDNFFTACTKKSTKLVIEESQSQSKTQKEAKSKRKGKKRDAPNDGAAKLNSKQSKKTKVEKEPKREKKDEEAPNGEAHNGDNNEDEETPGMGARDPFDTDDEEDNPSPNFFHQKSDSESGNVKKEKTEQEGNATTAGDVYNYPNGKDTAGSNTHLSSNSTLHSCNNVGSEKAPNEGMHTVGSSAPEAGTNHVGINHVGTNHVGINHVGTNHVGTNHVGSGDLFPPNVADCANNNADKAQPEMKKKNMLFLLPYCPKNVTNVKKRKSVQRC

Annotated regions:
phrase: TLMGIPVVEAPCEAESQCAFLTKYNLAHATATEDADALVFGTKILIRNLNANASSANQNKNKNSSKRGYILTEINLEQVLKGLN
type: DOMAIN
name: XPG-I_dom
description: XPG-I domain

phrase: LKPIYVFDGAPPEL
type: CONSERVED_SITE
name: XPG_CS
description: XPG conserved site

phrase: MGIKGLTKFIADAAPNAIKEIKIENLMGRVVAIDASMSLYQFIIAIRDSEQYGNLTNESGETTSHISGLMSRSIKLMENGLKPIYVFDGAPPELKGSELEKRGEKRQK
type: DOMAIN
name: XPG_DNA_repair_N
description: XPG, N-terminal

phrase: GIPVVEAPCEAESQCAFLTKYNLAHATATEDADALVFGTKILIRNLNANASSANQNKNKNSSKRGYILTEINLEQVLKGLNLSMNEFIDFCILCGC
type: DOMAIN
name: XPG-I_dom
description: XPG-I domain

phrase: GIPVVEAPCEAESQ
type: CONSERVED_SITE
name: XPG_CS
description: XPG conserved site

phrase: GRVVAIDASMSLYQFIIAIRDSEQYGNLTNESGETTSHISGLMSRSIKLMENGLKPIYVFDGAPPELKGSELEKRGEKRQKAEELLKKAKEEGNLEEIKKQSGRTVRVTRKQNEEAKKLLTLMGIPVVEAPCEAESQCAFLTKYNLAHATATEDADALVFGTKILIRNLNANASSANQNKNKNSSKRGYILTEINLEQVLKGLNLSMNEFIDFCILCGCDYCDTIKGIGSKTAYNLIKEYNSIEKIIENIDKNKYQVPSNFRFVEARDSFINPKVLPKEEVKIDWCEPKIEELKNFLI
type: DOMAIN
name: 5-3_exonuclease
description: 5'-3' exonuclease

phrase: MNEFIDFCILCGCDYCDTIKGIGSKTAYNLIKE
type: CONSERVED_SITE
name: HhH2
description: Helix-hairpin-helix motif, class 2

phrase: MGIKGLTKFIADAAPNAIKEIKIENLMGRVVAIDASMSLYQFIIAIRDSEQYGNLTNESGETTSHISGLMSRSIKLMENGLKPIYVFDGAPPELKGSELEKRGEKRQK
type: DOMAIN
name: XPG_DNA_repair_N
description: XPG, N-terminal
Protein sequence:
MNELLRDDIRYLGRILGEVISEQEGHHVFELVERARRTSFDIAKGRAEMDSLVEVFAGIDPEDATPVARAFTHFALLANLAEDLHDAAQREQALNSGEPAPDSTLEATWVKLDDAGVGSGEVAAVIRNALVAPVLTAHPTETRRRTVFDAQKHITALMEERHLLLALPTHARTQSKLDDIERNIRRRITILWQTALIRVARPRIEDEVEVGLRYYKLSLLAEIPRINHDVTVELARRFGGDIPTTAMVRPGSWIGGDHDGNPFVTAETVTYATHRAAETVLKYYVKQLHALEHELSLSDRMNVISDELRVLADAGQNDMPSRVDEPYRRAIHGMRGRMLATTAALIGEEAVEGTWFKTFTPYTDTHEFKRDLDIVDGSLRMSRDDIIADDRLAMLRSALDSFGFNLYSLDLRQNSDGFEDVLTELFATAQTEKNYRGLTEAEKLDLLIRELSTPRPLIPHGDPDYSEATNRELGIFSKAAEAVRKFGPLMVPHCIISMASSVTDILEPMVLLKEFGLIRANGKNPTGSVDVIPLFETIDDLQRGAGILEELWDIDLYRNYLEQRDNVQEVMLGYSDSNKDGGYFAANWALYDAELRLVELCRGRNVKLRLFHGRGGTVGRGGGPSYDAILAQPKGAVRGAVRVTEQGEIISAKYGNPDTARRNLEALVSATLEASLLDDVELPNRERAHQIMGEISELSFRRYSSLVHEDPGFIQYFTQSTPLQEIGSLNIGSRPSSRKQTNTVEDLRAIPWVLSWSQSRVMLPGWFGVGTALREWIGEGEGAAERIAELQELNRCWPFFTSVLDNMAQVMSKAELRLARLYADLIPDREVADRIYETIFGEYFLTKEMFCTITGSQDLLDDNPALARSVRSRFPYLLPLNVIQVEMMRRYRSGDEGTAVPRNIRLTMNGLSTALRNSG

Annotated regions:
phrase: VLTAHPTETRR
type: ACTIVE_SITE
name: PEP_COase_Lys_AS
description: Phosphoenolpyruvate carboxylase, Lys active site

phrase: VMLGYSDSNKDG
type: ACTIVE_SITE
name: PEPCASE_His_AS
description: Phosphoenolpyruvate carboxylase, His active site
Protein sequence:
MGKGRALSDGVIKKIILSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPITLTMIHMGFCSSLAVILIKVFKVVEPVSMSRETYLRSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVLLKKETFKSQTMTNMLSISFGVAIAAYGEAKFDGWGVFLQLGAVAFEATRLVLIQILLTSKGINLNPITSLYYVAPCCLVFLSVPWIFVEFPVLRDTSSFHFDFVIFGTNSVCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVGYYNHCKLQALKAKDAQKKVQASDDEAGKLLEERESEAKRNETQD

Annotated regions:
phrase: TYVAIWIFLSFTVIVYNKYILDKKMYNWPFPITLTMIHMGFCSSLAVILIKVFKVVEPVSMSRETYLRSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVLLKKETFKSQTMTNMLSISFGVAIAAYGEAKFDGWGVFLQLGAVAFEATRLVLIQILLTSKGINLNPITSLYYVAPCCLVFLSVPWIFVEFPVLRDTSSFHFDFVIFGTNSVCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVGYY
type: DOMAIN
name: Sugar_P_trans_dom
description: Sugar phosphate transporter domain
Protein sequence:
MDKYDKIIDLTKRRGFLWNSFEIYGGIAGFFDYGPLGAILKSSVINTWRKHYIINEGFYEIDSPTVNPYEVLKASGHVENFTDPLVECKSCLESFRADHIIEENIEVDTEGKTLNELQEMIEKNNIKCPKCGGEFKEVNTFNLMFATSIGPGGKRAAFMRPETAQGIFIQFKRISQFFRNKLPYGAVQIGKAYRNEISPRQGVIRLREFTQAEAEFFIDSRKKENFEKFESVKDLILPLLPGKNQENESLSSEEKIVRMSLGDAVKNKIIAHEAIAYYIAVTKKFLMDIGIDETKLRFRQHLPNEMAHYAADCWDAELYTDRYGWIECVGIADRTDYDLRAHMKNSGEDLSVFVEFDESKEIEVYEIELNYKLVGKTFKGDAKILEESLKELSNDKMEELIKTLKNNEKYILKTCKRDFEVLNEYLTVKKVKKNVTGEKIVPHVIEPSYGIDRITYCVIEHAFKEEDDRTLLAFVNTVSPVKVGVFPLVNKEGMDEIAENLKNKFRKNGIIAEYDDSGAIGRRYMRMDEIGTPFCVTVDGETLKDNTVTIRERDSREQFRIPLDGVVDYIKEKL

Annotated regions:
phrase: KVGVFPLVNKEGMDEIAENLKNKFRKNGIIAEYDDSGAIGRRYMRMDEIGTPFCVTVDGETLKDNTVTIRERDSREQFRIPLDGVVDYIKE
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: FMRPETAQGIFIQFKRISQFFRNKLPYGAVQIGKAYRNEISPRQGVIRLREFTQAEAEFFIDSRKKENFEKFESVKDLILPLLPGKNQENESLSSEEKIVRMSLGDAVKNKIIAHEAIAYYIAVTKKFLMDIGIDETKLRFRQHLPNEMAHYAADCWDAELYTDRYGWIECVGIADRTDYDLRAHMKNSGEDLSVFVEFDESKEIEVYEIELNYKLVGKTFKGDAKILEESLKELSNDKMEELIKTLKNNEKYILKTCKRDFEVLNEYLTVKKVKKNVTGEKIVPHVIEPSYGIDRITYCVIE
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: IIDLTKRRGFLWNSFEIYGGIAGFFDYGPLGAILKSSVINTWRKHYIINEGFYEIDSPTVNPYEVLKASGHVENFTDPLVECKSCLESFRADHIIEENIEVDTEGKTLNELQEMIEKNNIKCPKCGGEFKEVNTFNLMFATSIGPGGKRAAFMRPETAQGIFIQFKRISQFFRNKLPYGAVQIGKAYRNEISPRQGVIRLREFTQAEAEFFIDSRKKENFEKFESVKDLILPLLPGKNQENESLSSEEKIVRMSLGDAVKNKIIAHEAIAYYIAVTKKFLMDIGIDETKLRFRQHLPNEMAHYAADCWDAELYTDRYGWIECVGIADRTDYD
type: DOMAIN
name: GlyRS-like_core
description: Glycyl-tRNA synthetase-like core domain

phrase: DKIIDLTKRRGFLWNSFEIYGGIAGFFDYGPLGAILKSSVINTWRKHYIINEGFYEIDSPTVNPYEVLKASGHVENFTDPLVECKSCLESFRADHIIEENIEVDTEGKTLNELQEMIEKNNIKCPKCGGEFKEVNTFNLMFATSIGPGGKRAAFMRPETAQGIFIQFKRISQFFRNKLPYGAVQIGKAYRNEISPRQGVIRLREFTQAEAEFFIDSRKKENFEKFESVKDLILPLLPGKNQENESLSSEEKIVRMSLGDAVKNKIIAHEAIAYYIAVTKKFLMDIGIDETKLRFRQHLPNEMAHYAADCWDAELYTDRYGWIECVGIADRTDYDLRAHMKNSGEDLSVFVEFDESKEIEVYEIELNYKLVGKTFKGDAKILEESLKELSNDKMEELIKTLKNNEKYILKTCKRDFEVLNEYLTVKKVKKNVTGEKIVPHVIEPSYGIDRITYCVIEHAFKEEDDRTLLAFVNTVSPVKVGVF
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II
Protein sequence:
MTEQATTTDELAFTRPYGEQEKQILTAEAVEFLTELVTHFTPQRNKLLAARIQQQQDIDNGTLPDFISETASIRDADWKIRGIPADLEDRRVEITGPVERKMVINALNANVKVFMADFEDSLAPDWNKVIDGQINLRDAVNGTISYTNEAGKIYQLKPNPAVLICRVRGLHLPEKHVTWRGEAIPGSLFDFALYFFHNYQALLAKGSGPYFYLPKTQSWQEAAWWSEVFSYAEDRFNLPRGTIKATLLIETLPAVFQMDEILHALRDHIVGLNCGRWDYIFSYIKTLKNYPDRVLPDRQAVTMDKPFLNAYSRLLIKTCHKRGAFAMGGMAAFIPSKDEEHNNQVLNKVKADKSLEANNGHDGTWIAHPGLADTAMAVFNDILGSRKNQLEVMREQDAPITADQLLAPCDGERTEEGMRANIRVAVQYIEAWISGNGCVPIYGLMEDAATAEISRTSIWQWIHHQKTLSNGKPVTKALFRQMLGEEMKVIASELGEERFSQGRFDDAARLMEQITTSDELIDFLTLPGYRLLA

Annotated regions:
phrase: ELAFTRPYGEQEKQILTAEAVEFLTELVTHFTPQRNKLLAARIQQQQDIDNGTLPDFISET
type: DOMAIN
name: MS_N
description: Malate synthase, N-terminal domain

phrase: VLICRVRGLHLPEKHVTWRGEAIPGSLFDFALYFFHNYQALLAKGSGPYFYLPKTQSWQEAAWWSEVFSYAEDRFNLPRGTIKATLLIETLPAVFQMDEILHALRDHIVGLNCGRWDYIFSYIKTLKNYPDRVLPDRQAVTMDKPFLNAYSRLLIKTCHKRGAFAMGGMAAFIPSKDEEHNNQVLNKVKADKSLEANNGHDGTWIAHPGLADTAMAVFNDILGSRKNQLEVMREQDAPITADQLL
type: DOMAIN
name: Malate_synthase_TIM
description: Malate synthase, TIM barrel domain

phrase: RDHIVGLNCGRWDYI
type: CONSERVED_SITE
name: Malate_synthase_CS
description: Malate synthase, conserved site

phrase: ERTEEGMRANIRVAVQYIEAWISGNGCVPIYGLMEDAATAEISRTSIWQWIHHQKTLSNGKPVTKALFRQMLGEEMKVIASELGEERFSQGRFDDAARLMEQITTSDELIDFLTLPGYR
type: DOMAIN
name: MS_C
description: Malate synthase, C-terminal domain
Protein sequence:
MRLSRALIPTLKETPAEAQIASHRLMLRAGLIQQEAAGIYAWLPAGLRVLNAIANIVRDEQAGIGAQEVLMPTIQSADLWRESGRYDAYGPEMLRLKDRHERDLLYGPTNEEVITDIYRHSVKSYRELPQMAYQIQWKFRDEIRPRFGVMRGREFLMKDGYSFDLDYAGAVRSYRRIMLSYMRTFQRLGVKAIPMLADTGPIGGDLSHEFIILAPTGESEVFYDAAFEEIDWSGASFNVDSDADLERFFQTITGHYAATDEKHDTAAYEALPEARRRTGRGIEVGHIFYFGTKYSKALNMTVAGRDGQKLHPEMGSYGIGVSRMVAAVIEASHDEAGIIWPDSIAPFRAAVLNLKNGDAACDAMAEDVYRRIGVRHALYDDRDERAGVKFADADLMGHPWQVVIGPRGAAAGRVELKRRRTGERVELTVEDALARIRESV

Annotated regions:
phrase: EAQIASHRLMLRAGLIQQEAAGIYAWLPAGLRVLNAIANIVRDEQAGIGAQEVLMPTIQSADLWRESGRYDAYGPEMLRLKDRHERDLLYGPTNEEVITDIYRHSVKSYRELPQMAYQIQWKFRDEIRPRFGVMRGREFLMKDGYSFDLDYAGAVRSYRRIMLSYMRTFQRLGVKAIPMLADTGPIGGDLSHEFIILAPTGESEVFYDAAFEEIDWSGASFNVDSDADLERFFQTITGHYAATDEKHDTAAYEALPEARRRTGRGIEVGHIFYFGTKYSKALNMTVAGRDGQKLHPEMGSYGIGVSRMVAAVI
type: DOMAIN
name: ProRS_core_prok
description: Prokaryote proline-tRNA ligase core domain

phrase: GIYAWLPAGLRVLNAIANIVRDEQAGIGAQEVLMPTIQSADLWRESGRYDAYGPEMLRLKDRHERDLLYGPTNEEVITDIYRHSVKSYRELPQMAYQIQWKFRDEIRPRFGVMRGREFLMKDGYSFDLDYAGAVRSYRRIMLSYMRTFQRLGVKAIPMLADTGPIGGDLSHEFIILAPTGESEVFYDAAFEEIDWSGASFNVDSDADLERFFQTITGHYAATDEKHDTAAYEALPEARRRTGRGIEVGHIFYFGTKYSKALNMTVAGRDGQKLHPEMGSYGIGVSRMVAAVIEASHDEAGIIW
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: PFRAAVLNLKNGDAACDAMAEDVYRRIGVRHALYDDRDERAGVKFADADLMGHPWQVVIGPRGAAAGRVELKRRRTGERVELTVEDALAR
type: DOMAIN
name: ProRS_anticodon_short
description: Proline--tRNA ligase, anticodon binding domain

phrase: AAVLNLKNGDAACDAMAEDVYRRIGVRHALYDDRDERAGVKFADADLMGHPWQVVIGPRGAAAGRVELKRRRTGERVELTVEDALARIR
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: LKDRHERDLLYGPTNEEVITDIYRHSVKSYRELPQMAYQIQWKFRDEIRPRFGVMRGREFLMKDGYSFDLDYAGAVRSYRRIMLSYMRTFQRLGVKAIPMLADTGPIGGDLSHEFIILAPTGESEVFYDAAFEEIDWSGASFNVDSDADLERFFQTITGHYAATDEKHDTAAYEALPEARRRTGRGIEVGHIFYFGTKYSKALNMTVAGRDGQKLHPEMGSYGIGVSRMVAAVI
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
Protein sequence:
MTDLTTSDSTQPAWQTRDHLDDPVIGELSNRFGPEAFVVQATRTGMPVVWVKREQLLEVMTFLRKQPKPYVMLFDLHGVDERLRTHRQGLPAADFSVFYHLLSIERNRDIMLKVALSEKDLHVSTATKIFPNANWYERETWEMFGITFDGHPHLTRIMMPQTWEGHPLRKDYPARATEFDPFVLTKQKEDLEMESLTFKPEDWGMKRGTENEDFMFLNLGPNHPSSHGAFRIVLQLDGEEIVDCVPDVGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGIEVPDRVKTIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKVYDLVEAITGFRMHPAWFRIGGVAHDLPRGWERLLRDFLDWMPKRLDSYVKAALQNSILKGRSIGVAAYNAKEALEWGVTGAGLRATGVEFDVRKWRPYSGYENFDFEVPVGNNGDCYDRVMLKVEELRQSLRILEQCYKNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMVEATKGINSYYLTSDASTMSYRTRIRTPSYAHLQQIPSVIRGSLVSDLIVYLGSIDFVMSDVDR

Annotated regions:
phrase: VWVKREQLLEVMTFLRKQPKPYVMLFDLHGVDERLRTHRQGLPAADFSVFYHLLSIERNRDIMLKVALSEKDLHVSTATKIFPNANWYERETWEMFGITFDGHPHLTRIMMPQTWEGHPLRKDYPARA
type: DOMAIN
name: NADH_UbQ_OxRdtase_30kDa_su
description: NADH:ubiquinone oxidoreductase, 30kDa subunit

phrase: DVGAMTPVFFAFTDRQKVYDLVEAITGFRMHPAWFRIGGVAHDLPRGWERLLRDFLDWMPKRLDSYVKAALQNSILKGRSIGVAAYNAKEALEWGVTGAGLRATGVEFDVRKWRPYSGYENFDFEVPVGNNGDCYDRVMLKVEELRQSLRILEQCYKNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMVEATKGINSYYLTSDASTMSYRTRIRTPSYAHLQQIPSVIRGSLVSDLIVYLGSIDFVMSDVD
type: DOMAIN
name: NADH_Q_OxRdtase_suD
description: NADH-quinone oxidoreductase, subunit D

phrase: HHRGAEKMGER
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_49kDa_CS
description: NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site
Protein sequence:
MLRPAAPPATTLRTVAELTGARPAGSAAGFEDIQLTGIEQRSNAVLPGDLFAGLAGDRAHGARFARGAVERGAVAILTDPAGAELIGEIAVPVLVHDSPRAVLGELSSALYGDPSRKLRIVGITGTSGKTTTSYLVEAGLAAAGLRTALIGTIETRIGGVRVPSALTTPEAPQLHAMFALMVERGVDAVVMEVSSHALALGRVDGVRFAVGAFTNLSQDHLDFHAGFEDYFAAKRRLFVPDGPDSAAAPRPSVAARTAVICVDDEWGQRLAGDVSDCLAAESGDAAGRLRTVATRAGVPADWTAGPAIAGPGGTQEFTASGPGVNVDVRLRLPGAYNIANGILAVAVCAAAGVEAQTAAAALGAVDVPGRMQRVDRGQEFLAVVDYAHKPAAIESVVATLRTWLAERRLLPGLGEGRLAVVVGAGGDRDAGKRPLMGAAAARGSDLAIITDDNPRSEDPAAIRAAVLAGAQAVPGAERGEVREVGDRAAAIRIAVDWAQPGDVVLVAGKGHETGQEIAGVKHPFDDREVLAAALSEKTRDLTHS

Annotated regions:
phrase: ITGTSGKTTTSYLVEAGLAAAGLRTALIGTIETRIGGVRVPSALTTPEAPQLHAMFALMVERGVDAVVMEVSSHALALGRVDGVRFAVGAFTNLSQDHLDFHAGFEDYFAAKRRLFVPDGPDSAAAPRPSVAARTAVICVDDEWGQRLAGDVSDCLAAESGDAAGRLRTVATRAGVPADWTAGPAIAGPGGTQEFTASGPGVNVDVRLRLPGAYNIANGILAVAV
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: TGIEQRSNAVLPGDLFAGLAGDRAHGARFARGAVERGAVAILTDPAGAELIGEIAVPVLVHDSPRAVLGELSS
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: GRMQRVDRGQEFLAVVDYAHKPAAIESVVATLRTWLAERRLLPGLGEGRLAVVVGAGGDRDAGKRPLMGAAAARGSDLAIITDDNPRSEDPAAIRAAVLAGAQAVPGAERGEVREVGDRAAAIRIAVDWAQPGDVVLVAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MTIAIGKSSKEPKDLFDSMDDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGSFGLIGFMLRQFELARSVQLRPYNAIAFSGPISVFVSVSLIYPLGQAGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQSEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLVFPEEVLPRGNAL

Annotated regions:
phrase: NWTLNPFHMMGVAGVLGAALLCAIHG
type: CONSERVED_SITE
name: Photo_RC_L/M_CS
description: Photosynthetic reaction centre, L/M, conserved site
Protein sequence:
MTEKQCTIKAPVQLKGVGLHTGELVNIEICPAPADHGYKFQRVDLPEQPIIKADVDLVVSTERGTTLESKGARVYTTEHVLAALYGCQVDNALIKIDGAEIPIMDGSAKPYVDAILSAGIEEQDAVREYFELNENIPWEDTEKGIEFLAIPDINYRLTVMVDYQSPVLGTQHASMYHIGEFNKEIASCRTFVFLRELEYLATNNLIKGGDLDNAIVLVDRIDVSKDELTKLAKLLGKENLEISIDSIGVLNSTKLQYENEPARHKLLDIVGDLALIGKPLKAHILAARPGHSGNVRFAKVLKDQIKKQQNEGKFFDLTKDPVYNINDIEKMLPHRYPFLMVDKIMDIQEESIIGVKNITMNEPIFTGHFPGNPVFPGVLQIEAMAQVGGIFALSKVEDPHLYSTYFMKIDKVKFKQKVLPGDTVVFELKLLSPIRRGLVEMGGQAYVNGKVVMEAEMLAQVIKDKEA

Annotated regions:
Protein sequence:
MTTPSMEDYIEQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDEYLIYEKYRGLVLTSKGKKIGKRLVYRHELLEQFLRIIGVDEEKIYNDVEGIEHHLSWNSIDRIGDLVQYFEEDDARKKDLKSIQKKTEHHNQ

Annotated regions:
phrase: TSKGKKIGKRLVYRHELLEQFLRIIGVDEEKIYNDVEGIEHHLSWNSIDRIGDLVQYFEEDDARK
type: DOMAIN
name: Fe_dep_repressor
description: Iron dependent repressor, metal binding and dimerisation domain

phrase: MTTPSMEDYIEQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDEYLIYEKYRG
type: DOMAIN
name: HTH_DTXR
description: DTXR-type HTH domain

phrase: MTTPSMEDYIEQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDEYLIYEKYRGLVL
type: DOMAIN
name: HTH_DTXR
description: DTXR-type HTH domain
Protein sequence:
MPIRVPDELPAVNFLREENVFVMTTSRASGQEIRPLKVLILNLMPKKIETENQFLRLLSNSPLQVDIQLLRIDSRESRNTPAEHLNNFYCNFEDIQEQNFDGLIVTGAPLGLVEFNDVAYWPQIKQVLEWSKDHVTSTLFVCWAVQAALNILYGIPKQTRTDKLSGVYEHHILHPHALLTRGFDDSFLAPHSRYADFPAALIRDYTDLEILAETEEGDAYLFASKDKRIAFVTGHPEYDAQTLAQEYLRDVEAGLDPDVPYNYFPHNDPQNKPRASWRSHGNLLFTNWLNYYVYQITPYDLRHMNPTLD

Annotated regions:
Protein sequence:
MLAGKKVLIGVTGGIAAYKIAEVVSRLRKLEVDVHVAMTKSATEFITPLTLRSLSTNPVHVDMFAEPKLWNVEHIALAEHVDAVVVAPATANIIAKMAVGLADDFLSTVLLATRAPIFVAPAMNQAMYQNPATQGNLHRLKERGMRIIGPGVGFQACGTDGVGRMSEAAEIVEAVVQFFAESPCLKGKRALVTAGGTQEPLDPVRYLGNRSSGRMGFAIAQALQEAGAETILVSAPTDLPTPPGVTRVSVQTALEMHDAVLAEFNKLDVVVKAAAVADYRPASQAEQKIKKDGANRTIELVPNPDILAELGRRKTSQVLIGFAAETENLLAYAQEKMQRKNVNLLVANDVTKPGAGFGSMTNIVSFLFPDGRRIDFPQMSKLEVAKNLVAEIARLLG

Annotated regions:
phrase: LKGKRALVTAGGTQEPLDPVRYLGNRSSGRMGFAIAQALQEAGAETILVSAPTDLPTPPGVTRVSVQTALEMHDAVLAEFNKLDVVVKAAAVADYRPASQAEQKIKKDGANRTIELVPNPDILAELGRRKTSQVLIGFAAETENLLAYAQEKMQRKNVNLLVANDVTKPGAGFGSMTNIVS
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal

phrase: KKVLIGVTGGIAAYKIAEVVSRLRKLEVDVHVAMTKSATEFITPLTLRSLSTNPVHVDMFAEPKLWNVEHIALAEHVDAVVVAPATANIIAKMAVGLADDFLSTVLLATRAPIFVAPAMNQAMYQNPATQGNLHRLKERGMRIIGPGVGFQACGTDGVGRMSEAAEIVEAVVQ
type: DOMAIN
name: Flavoprotein
description: Flavoprotein
Protein sequence:
MTNSNTRTESHFDYVKIKLASPERIREWGQRTLPNGQVVGEVTKPETINYRTLKPEMDGLFCEKIFGPSKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGFIKLAAPVSHVWYLKGIPSYVAILLDMPLRDVEQIVYFNCYVVLDPGDHKTLKYKQLLTEDEWLEIEDEIYAEDSEIETEPEVGIGAEALKALLEDLELTEIAEQLREDISGSKGQKRAKLIKRLRVIDNFIATDARPEWMVLDAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRSVIVVGPKLKMHQCGLPKEMAIELFQPFVIHRLIRQNIVNNIKAAKKLIQRADDEVMQVLQEVIDGHPILLNRAPTLHRLGIQAFEPKLVDGRAIQLHPLVCPAFNADFDGDQMAVHVPLALEAQTEARMLMLASNNILSPATGQPIITPSQDMVLGAYYLTATRQERSKPEFGDRSRTYANLEDVCHAFEEKRITLHDWVWVRFNGAVDDDDEAKEPIKSETLSDGTRVEQWQYRRDRLDEDGALISRYVLTTTGRVVMNRTIIDAVVTR

Annotated regions:
phrase: HFDYVKIKLASPERIREWGQRTLPNGQVVGEVTKPETINYRTLKPEMDGLFCEKIFGPSKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGFIKLAAPVSHVWYLKGIPSYVAILLDMPLRDVEQIVYFNCYVVLDPGDHKTLKYKQLLTEDEWLEIEDEIYAEDSEIETEPEVGIGAEALKALLEDLELTEIAEQLREDISGSKGQKRAKLIKRLRVIDNFIATDARPEWMVLDAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQN
type: DOMAIN
name: RNA_pol_Rpb1_1
description: RNA polymerase Rpb1, domain 1

phrase: EWMVLDAIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRSVIVVGPKLKMHQCGLPKEMAIELFQPFVIHRLIRQNIVNNIKAAKKLIQRADDEVMQVLQEVIDGHPILLNRAPTLHRLGIQAFEPKLVDGRAIQLHPLVCPAFNADFDGDQMAVHVPLALEAQTEARMLMLASNNILSPATGQPIITPSQDMVLGAYYL
type: DOMAIN
name: RNA_pol_N
description: RNA polymerase, N-terminal

phrase: NILSPATGQPIITPSQDMVLGAYYLTATRQERSKPEFGDRSRTYANLEDVCHAFEEKRITLHDWVWV
type: DOMAIN
name: RNA_pol_Rpb1_3
description: RNA polymerase Rpb1, domain 3

phrase: GKRVDYSGRSVIVVGPKLKMHQCGLPKEMAIELFQPFVIHRLIRQNIVNNIKAAKKLIQRADDEVMQVLQEVIDGHPILLNRAPTLHRLGIQAFEPKLVDGRAIQLHPLVCPAFNADFDGDQMAVHVPLALEAQTEARMLM
type: DOMAIN
name: RNA_pol_asu
description: RNA polymerase, alpha subunit
Protein sequence:
MANLEKLVEDLSALTVLEAAELSKMLEEKWGVSAAAPVAVAAAPAAGGGEAAPAGEEQTEFTVVLTAGGDKKINVIKEVRGVRPDLGLKEAKDLVEGAPQNVKENVSKQEAEEIKKKLEEAGASVQIK

Annotated regions:
phrase: EKLVEDLSALTVLEAAELSKMLEEKWGVSAAAPVAVAAAPAAGG
type: DOMAIN
name: Ribosomal_bL12_oligo
description: Large ribosomal subunit protein bL12, oligomerization

phrase: FTVVLTAGGDKKINVIKEVRGVRPDLGLKEAKDLVEGAPQNVKENVSKQEAEEIKKKLEEAGASVQI
type: DOMAIN
name: Ribosomal_bL12_C
description: Large ribosomal subunit protein bL12, C-terminal
Protein sequence:
MPFIPHTEDDVRLMLDTIGVESIDALFDEIPAELNTHPILESVPKPQSEAATLRLQSARAREGDGRLNFIGAGAYEHHIPAAVWELVTRGEFYSAYTPYQAEASQGILQTIYEFQSMMAGLMGMDLSNASLYDGATALAEAVLMAVRANPAPRGSTPRVIMPATVHPAYREVVQTMVRHQGIELVEPSFCAKRGGVAVSALNLYADEPVQALVIAQPNFFGQLEDVDFLTNWAHKRGALVIGVVNPVAMALLKPPAAWGEKGADIACGEGQPLGVPLSFGGPYLGFLSCRQALARQMPGRIVGRTLDQEGKEGFVLTLQAREQHIRRAKATSNICTNQGLLSIAATIHMAMLGPEGLKNVALTCHRRTQQLWQRLALLEGVERCFEGPFFHEVAIKLSKPAEEVLTCLSGVNIAGGYAVGRRYPGMENVLLVCCTETKERSDLDHYADALGLIMSEQGSAA

Annotated regions:
phrase: FIPHTEDDVRLMLDTIGVESIDALFDEIPAELNTHPILESVPKPQSEAATLRLQSARAREGDGRLNFIGAGAYEHHIPAAVWELVTRGEFYSAYTPYQAEASQGILQTIYEFQSMMAGLMGMDLSNASLYDGATALAEAVLMAVRANPAPRGSTPRVIMPATVHPAYREVVQTMVRHQGIELVEPSFCAKRGGVAVSALNLYADEPVQALVIAQPNFFGQLEDVDFLTNWAHKRGALVIGVVNPVAMALLKPPAAWGEKGADIACGEGQPLGVPLSFGGPYLGFLSCRQALARQMPGRIVGRTLDQEGKEGFVLTLQAREQHIRRAKATSNICTNQGLLSIAATIHMAMLGPEGLKNVALTCHRRTQQLWQRLALLEGVERCFEGPFFHEVAIKLSKPAEEVLTCLSGVNIAGGYAVGRRYPGMENVLLVCCTETKERSDLD
type: DOMAIN
name: GDC-P_N
description: Glycine cleavage system P-protein, N-terminal domain
Protein sequence:
MVVVVDTVSDKPIRPRHPEKAARPDALSPKKPDWIRVRAPTSRGYADTRAIVKENGLHTVCEEAGCPNIGECWDRKHATFMIMGDTCTRACAFCNVKTGMPAALDGAEPANVAEATAKLGLAHLVITSVDRDDLADGGAAHIAATIRAVRERCPSTTIEVLTPDFLRKDGALEIVVAAKPDVFNHNLETVPARYLEVRPGARYFHSIRLLQRAKEIDPTLFTKSGIMLGLGEQRSEVLQVMDDLRSADVDFLTIGQYLQPTLKHHAVMSYIPPEEFSSYESLAYAKGFLMVSSSPMTRSSHHAGADFAKLQAARAALPR

Annotated regions:
phrase: WDRKHATFMIMGDTCTRACAFCNVKTGMPAALDGAEPANVAEATAKLGLAHLVITSVDRDDLADGGAAHIAATIRAVRERCPSTTIEVLTPDFLRKDGALEIVVAAKPDVFNHNLETVPARYLEVRPGARYFHSIRLLQRAKEIDPTLFTKSGIMLGLGEQRSEVLQVMDDLRSADVDFLTIGQYLQPTLKHHAVMSYIPPEEFSSYESLAYAKGF
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: MIMGDTCTRACAFCNVKTGMPAALDGAEPANVAEATAKLGLAHLVITSVDRDDLADGGAAHIAATIRAVRERCPSTTIEVLTPDFLRKDGALEIVVAAKPDVFNHNLETVPARYLEVRPGARYFHSIRLLQRAKEIDPTLFTKSGIMLGLGEQRSEVLQVMDD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: HATFMIMGDTCTRACAFCNVKTGMPAALDGAEPANVAEATAKLGLAHLVITSVDRDDLADGGAAHIAATIRAVRERCPSTTIEVLTPDFLRKDGALEIVVAAKPDVFNHNLETVPARYLEVRPGARYFHSIRLLQRAKEIDPTLFTKSGIMLGLGEQRSEVLQVMDDLRSADVDFLTIGQYLQPTLKHHAVMSYIPPEEFSSYESLA
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain
Protein sequence:
MSDTGKPQVVLGVCGGIAAYKACELLRRLTESGHAVRVVPTEEALRFVGEPTWAALSGRPVATGVWDAVHEVPHVRIGQTADLVFVAPATANLLAKAAAGLADDLLTNTLLTARCPVVFAPAMHTEMWEHPATQANVATLRSRGAVVLDPAVGRLTGADTGRGRLPDPAELFEAARMVLRRGGRAPDLAGRRVVISAGGTREAIDPVRFIGNHSSGKQGYALARTAAARGAEVTLVAANVALPDPAGVRVVPVESALDLADAMEAERRGADAVVMSAAVADFRPAASAASKIKKDGSAPAPVELVENPDVLAGLVASRDREGLAQTVVGFAAETDDVLANGRAKLARKGCDLLVVNQVGGGRAFGTEDNQAVVLGPDGTAVEIPRGPKEDLADRVWDLVAERLPD

Annotated regions:
phrase: LAGRRVVISAGGTREAIDPVRFIGNHSSGKQGYALARTAAARGAEVTLVAANVALPDPAGVRVVPVESALDLADAMEAERRGADAVVMSAAVADFRPAASAASKIKKDGSAPAPVELVENPDVLAGLVASRDREGLAQTVVGFAAETDDVLANGRAKLARKGCDLLVVNQVGGGRAFGTEDNQAV
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal

phrase: QVVLGVCGGIAAYKACELLRRLTESGHAVRVVPTEEALRFVGEPTWAALSGRPVATGVWDAVHEVPHVRIGQTADLVFVAPATANLLAKAAAGLADDLLTNTLLTARCPVVFAPAMHTEMWEHPATQANVATLRSRGAVVLDPAVGRLTGADTGRGRLPDPAE
type: DOMAIN
name: Flavoprotein
description: Flavoprotein
Protein sequence:
MLKEFEIEPLLKDKAPHQTKAIVAMSGGVDSSVAAALLYNLGYEVIGVTLQLYGSDGNARKGACCAGQDIYDAKYVAESVGFPHYILNYEEIFKKEVIEDFANTYMRGETPIPCVRCNQTVKFRDLLQVTKNLGADVLVTGHYVRRLEENGEVKLCRSIDKSKDQSYFLFATTEEQLKLLRFPLGGFYKSDIRKLAKYFGLQISEKPDSQDICFVSESYSKTIAKLAPQSVQKGKIVDIHGKVLGEHSGIVNFTVGQRRGLCIAHNEPLYVIKINTENNEVVVGPINALMQKKILVKELNWLEQPKEGMEVTVKLRSSHAGSSATIYSTDEKNKACVILNDDYFGISPGQACVAYKGEQVIGGGWICS

Annotated regions:
phrase: KKILVKELNWLEQPKEGMEVTVKLRSSHAGSSATIYSTDEKNKACVILNDDYFGISPGQACVAYKGEQVIGGGW
type: DOMAIN
name: MnmA-like_C
description: tRNA-specific 2-thiouridylase MnmA-like, C-terminal domain

phrase: VQKGKIVDIHGKVLGEHSGIVNFTVGQRRGLCIAHNEPLYVIKINTENNEVVV
type: DOMAIN
name: MnmA-like_central
description: tRNA-specific 2-thiouridylase MnmA-like, central domain
Protein sequence:
MTTFTHINHQGEANMVDVSAKQDTVREARAEAFVRMSPATLEMILSGQHHKGDVFATARIAGIQAAKRTWELIPLCHPLLLSKVEVNLTALPEISSVRVESICKLSGKTGVEMEALTAASIAALTIYDMCKAVQKDIVIEQVRLLEKSGGKSGHFIAE

Annotated regions:
phrase: MVDVSAKQDTVREARAEAFVRMSPATLEMILSGQHHKGDVFATARIAGIQAAKRTWELIPLCHPLLLSKVEVNLTALPEISSVRVESICKLSGKTGVEMEALTAASIAALTIYDMCKAVQKDIVIEQVRLLEKSG
type: DOMAIN
name: Mopterin_CF_biosynth-C_dom
description: Molybdopterin cofactor biosynthesis C (MoaC) domain