nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MPMRPLVIVPDPILREISKPVEYIDSAVQKLADDMLETMYHAQGVGLAAIQIGIPLRMLVLDVSRNDEQKNPLVIINPEVLWLSDERNIYKEGCLSIPEYFAEVERPKRLCVRYQNREGKQTEIEADDLLATCLQHEIDHLNGRLFIDYLSKIKRDMVIRKFKKRAKEKNTQEAVL

Annotated regions:
Protein sequence:
MQPQIVLLKEGTDSSQGKPQLVSNINACQSIVDAVRTTLGPRGMDKLIVDAHGKATISNDGATIMKLLEIIHPAAKTLVDIAKSQDAEVGDGTTSVVLLAGEFLKQVKPFVEEGVHPRVIIKAIRKALQLCMEKINEMAVQIVEQSKDQQRALLEKCAATAMSSKLIHQQKDFFSRIVVDAVLSLDELLPLNMIGIKKVTGGSLEESQLVSGVAFKKTFSYAGFEMAPKSYDNCKIALLNIELELKAERDNAEIRVDNVKEYQKVVDAEWQILYNKLAKIHESGANVVLSKLPIGDVATQYFADRDIFCAGRVPEEDLKRTMKACGGAVMTTANDIKPNVLGLCEHFEERQVGGERFNLFQGCPNAKTSTLILRGGAEQFLEETERSLHDAIMIVRRTIKHDSVVAGGGAIEMELSKLLRDYSRTIAGKEQLLIAAIAKGLEIIPRQLCDNAGFDATNILNKLRQKHAQGGQWYGVDINKEDISDNYEQCVWEPSIIKINALTAAAEAACMILSVDETIKSPKAGEPPMAGGGMGMGRGMGRPM

Annotated regions:
phrase: QDAEVGDG
type: CONSERVED_SITE
name: Chaperonin_TCP-1_CS
description: Chaperonin TCP-1, conserved site

phrase: RTTLGPRGMDKL
type: CONSERVED_SITE
name: Chaperonin_TCP-1_CS
description: Chaperonin TCP-1, conserved site

phrase: ISNDGATIMKLLEIIH
type: CONSERVED_SITE
name: Chaperonin_TCP-1_CS
description: Chaperonin TCP-1, conserved site
Protein sequence:
MRYLFLIILVAFAALTTAVPAGSSITPPPPIEPVQLLSPQSSDVRRPWTRVRDWIIETVWGLPKPTSYRLPFNHLSHDQSAPSRVQARYGSDVVLRFRLRNDKEAEALEQATEILFLDVWASTSDFVDVRLAEEVIPSLLGLLPDSLRTAYSPLIDNLPELIYTTYPTRRPIGLEGQPGFRPSVRQSAQLGDLFFQDYQPLSVIVPWMRLMASMFPSHVRMINVGISYEGREIPALRLGAGSNRAQSAPRRTIVMVGGSHAREWISTSTVTYVASNLISNFGKSRAVTRLLEDFDVVLVPTINPDGYVYTWEVDRLWRKSRQRTSLRFCPGIDLDRSWNFEWDGERTRSNPCSENYAGDEPFEGVEAAQFAQWALNETQNNNVDIVGFLDLHSYSQQVLYPFSFSCSSVPPTLETLEELAMGFAKVIRQTTHEIYDVTSACEGTVTATDKASAKTFFPVSGGGSALDWFYHQLHASFAYQIKLRDRGSYGFLIPSEYIVPTGKEIYNVVLKMGEFLVKETASPANKADINWDADLLVHDDSTRTSSSESVSDPLSEANIDSTSTVKATPLPFPEDTLDSEWVPFDQNEEENEEEQNWELRRRRR

Annotated regions:
phrase: YQPLSVIVPWMRLMASMFPSHVRMINVGISYEGREIPALRLGAGSNRAQSAPRRTIVMVGGSHAREWISTSTVTYVASNLISNFGKSRAVTRLLEDFDVVLVPTINPDGYVYTWEVDRLWRKSRQRTSLRFCPGIDLDRSWNFEWDGERTRSNPCSENYAGDEPFEGVEAAQFAQWALNETQNNNVDIVGFLDLHSYSQQVLYPFSFSCSSVPPTLETLEELAMGFAKVIRQTTHEIYDVTSACEGTVTATDKASAKTFFPVSGGGSALDWFYHQLHASFAYQIKLRDRGSYGFLIPSEYIVPTGK
type: DOMAIN
name: Peptidase_M14
description: Peptidase M14, carboxypeptidase A

phrase: VPWMRLMASMFPSHVRMINVGISYEGREIPALRLGAGSNRAQSAPRRTIVMVGGSHAREWISTSTVTYVASNLISNFGKSRAVTRLLEDFDVVLVPTINPDGYVYTWEVDRLWRKSRQRTSLRFCPGIDLDRSWNFEWDGERTRSNPCSENYAGDEPFEGVEAAQFAQWALNETQNNNVDIVGFLDLHSYSQQVLYPFSFSCSSVPPTLETLEELAMGFAKVIRQTTHEIYDVTSACEGTVTATDKASAKTFFPVSGGGSALDWFYHQLHASFAYQIKLRDRGSYGFLIPSEYIVPTGKE
type: DOMAIN
name: Peptidase_M14
description: Peptidase M14, carboxypeptidase A

phrase: VGISYEGREIPA
type: DOMAIN
name: Peptidase_M14
description: Peptidase M14, carboxypeptidase A

phrase: RTIVMVGGSHAREW
type: DOMAIN
name: Peptidase_M14
description: Peptidase M14, carboxypeptidase A

phrase: GIDLDRSW
type: DOMAIN
name: Peptidase_M14
description: Peptidase M14, carboxypeptidase A

phrase: LDLHSYSQQVLYP
type: DOMAIN
name: Peptidase_M14
description: Peptidase M14, carboxypeptidase A
Protein sequence:
MSILEQVQPIETMLPERYYTMSTEDMEKRVREIKEKMGKMLFIPGHHYQKDEVVQFSDAVGDSLQLAQVAASNKDAKYIVFCGVHFMAETADMLTTDDQVVILPDMRAGCSMADMADIEQTERAWKELTKLFGDTMIPLTYVNSTAAIKAFCGRNGGATVTSSNAKQMVSWAFTQKERLVFLPDQHLGRNTAYDLGIPLDKMAVWDPHTDSLEYDGDIEEIQVILWKGHCSVHQNFTVKNIESVRKNHSDMNIIVHPECCYEVVAASDYAGSTKYIIDMIESAPPGSKWAIGTEMNLVNRIIQQHPDKEIVSLNPFMCPCLTMNRIDLPHLLWALETIERGEEINVISVDKQVTAEAVLALNRMLERV

Annotated regions:
Protein sequence:
MNIQALLSEKVRQAMIAAGAPADCEPQVRQSAKVQFGDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALASDRLGVSTPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEMELADLEGFYRDAKKHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAAPVIIREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVERM

Annotated regions:
phrase: MQYAYTRVLSVFRKAEINEEQLAAAPVIIREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVER
type: DOMAIN
name: DALR_anticod-bd
description: DALR anticodon binding

phrase: HVQQALASDRLGVSTPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEMELADLEGFYRDAKKHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFKTRAGGTVKLADLLDEALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFD
type: DOMAIN
name: ArgRS_core
description: Arginyl-tRNA synthetase, catalytic core domain

phrase: MNIQALLSEKVRQAMIAAGAPADCEPQVRQSAKVQFGDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIF
type: DOMAIN
name: Arg-tRNA-synth_N
description: Arginyl tRNA synthetase N-terminal domain

phrase: TIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVGDWGTQFGMLIAWLEKQQQENAGEMELADLEGFYRDAKKHYDEDEEFAERARNYVVKLQSGDEYFREMWRKLVDITMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKGLAVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVLYYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFKTRA
type: DOMAIN
name: ArgRS_core
description: Arginyl-tRNA synthetase, catalytic core domain

phrase: LSEKVRQAMIAAGAPADCEPQVRQSAKVQFGDYQANGMMAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIF
type: DOMAIN
name: Arg-tRNA-synth_N
description: Arginyl tRNA synthetase N-terminal domain

phrase: MQYAYTRVLSVFRKAEINEEQLAAAPVIIREDREAQLAARLLQFEETLTVVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENEEVRNSRLKLAQLTAKTLKLGLDTLGIETVER
type: DOMAIN
name: DALR_anticod-bd
description: DALR anticodon binding

phrase: PNVAKEMHVGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site
Protein sequence:
MRRPAILAAAVLLAPLAACSTVKEAVKGPDLAPVGYPAPLAPMQQQYVSAREPAPQAASANSLWRVGARAFFNDQRASRVGDIVTVMIDIDDSASTKNATNSSRTANMKAGVPHLLGMESSLGKFLPGGFDPASALETNSTTTNAGSGGVSRSEKISLTIAAVVSQVLPNGNMVIQGTQEVRTNAELRQLTVAGIVRPEDISSANTIRHTQIAEARISYGGRGDISRVQKTPAGQSLVEKFSPF

Annotated regions:
Protein sequence:
MVKALVIINCIILAIGNCGGPLIMRLYFNNGGKRIWFSTFLETAGFPVIFIPLLFSYITRRRSNNVGDSTSFFLIKPRLLIAAVIVGILSGFDNYLYAYGIAYLPVSTAALIIASQLAFIAIFSFFMVKHKFTPFTINAVVLLTVGAAVLGMHTETDKPVHETHKQYITGFLITVAAAVMYAFILPLVELAYQKAKQTMSYTLVLEFQLILCLLASIVSVIGMFIAGDFKALPKEAREFKLGEALFYVVAVFSAIIWQGFFLGAIGLIFSTSSLVSGIMISVLLPITEVLAVIFYHEKFQAEKGLSLALSLWGFVSYFYGEIKSGEDKRRIQQEESQETEQSSLSRPISEC

Annotated regions:
Protein sequence:
MENSGLLALPLNAATIVPEGAILLALLSSLLVDLAGEKTASRWVPPICYAGLGSALILLASQWNSTLSPSFLGAFLADNLAIAFRAIIATSTLFSLMISWRYVERSGAPMGEYAAILLAATLGAMFLCGSTDLVSIFVSLETLSVSSYLLAGYMKQDARSSEAALKYLLVGSATAAVFLYGASLLYGLTGGSTNLDAVALALQSSDTPVAALALVFVLATVAFKIAAVPFHQWTPDVYEGAPTPIVAFLSVGSKTAGFALALRLLVGCFESFDIQWKFLFSLLAILSMVLGNIVALSQTSMKRMLAYSSIGQAGFVMIGLVCGTEDGFAAMILYLATYLFMNMGAFACVILFSIRTGSDLIADYAGLYQKDPLVTIGLSLCLLSLGGIPPMLGFFGKIYLFFAGWADHQYLLVVTGLITSVVSIYYYISVIRMMVVIEPKEASDVVKSYAAVNWNIPGLNPLRVALLVCVIVTGIGGIFSNPLFQWANSAVAGTPILQKVIVTALGTTGTIS

Annotated regions:
phrase: STDLVSIFVSLETLSVSSYLLAGYMKQDARSSEAALKYLLVGSATAAVFLYGASLLYGLTGGSTNLDAVALALQSSDTPVAALALVFVLATVAFKIAAVPFHQWTPDVYEGAPTPIVAFLSVGSKTAGFALALRLLVGCFESFDIQWKFLFSLLAILSMVLGNIVALSQTSMKRMLAYSSIGQAGFVMIGLVCGTEDGFAAMILYLATYLFMNMGAFACVILFSIRTGSDLIADYAGLYQKDPLVTIGLSLCLLSLGGIPPMLGFFGKIYLFFAGWADHQYLLVVTGLITSV
type: DOMAIN
name: ND/Mrp_TM
description: NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domain
Protein sequence:
MNGKKIVLYVTGSIAAYKAVYLMRILQKNGAEVRVVMTPFATKFVSKTTFQTLSKHKVYDDESYFIEERVTHIELAQWADISIVAPATADFIAKAANGIADNFAQTVFLATPSLKIVVPAMNDIMLKNDATQKNIATLQKNGVDVIDSDVGMLAEGYSAKGRMPDPKNIVEHVIAKMSDGNKLKDLNFLVTAGGTREQIDPVRFISNRSSGKMGYAIAKAARDQGANVTLISANSSLPDPRGMKIIKVNSVDELQTEILTEFKKNNVLVMAAAVSDFKPKKIAKQKIKKLDDENSISLVLEKTTDILKEISKLKKNNQYVVGFAAETQSPEKNAKIKLKKKNLDLIVLNDVSNPKIGFNSDLNQVTFISNNGIKKTTEVETKDKIATELMDIIVTNFKD

Annotated regions:
phrase: KDLNFLVTAGGTREQIDPVRFISNRSSGKMGYAIAKAARDQGANVTLISANSSLPDPRGMKIIKVNSVDELQTEILTEFKKNNVLVMAAAVSDFKPKKIAKQKIKKLDDENSISLVLEKTTDILKEISKLKKNNQYVVGFAAETQSPEKNAKIKLKKKNLDLIVLNDVSNPKIGFNSDLNQVTF
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal

phrase: KKIVLYVTGSIAAYKAVYLMRILQKNGAEVRVVMTPFATKFVSKTTFQTLSKHKVYDDESYFIEERVTHIELAQWADISIVAPATADFIAKAANGIADNFAQTVFLATPSLKIVVPAMNDIMLKNDATQKNIATLQKNGVDVIDSDVGMLAEGYSAKGRMPDPKNIVEHVIA
type: DOMAIN
name: Flavoprotein
description: Flavoprotein
Protein sequence:
MKIFLDTANISEIKEGIDLGLVDGVTTNPTLISKEAGGSKKYAEIIKEILKIVDGPVSVEVVSTKSDGMVEEARKIHALGDNAVVKIPMTDEGLKAIRKLSQENIETNCTLVFNPIQALLAAKSGATYVSPFVGRLDDIGQDGMQIIDEIKTIFNNYIIKTQILVASVRNPIHVLRAAIIGADVVTIPFSVLKLLIKHPKTDEGLTRFLEDWKKVSPDGKFII

Annotated regions:
phrase: GVTTNPTL
type: ACTIVE_SITE
name: Transaldolase_AS
description: Transaldolase, active site

phrase: AVVKIPMTDEGLKAIRK
type: ACTIVE_SITE
name: Transaldolase_AS
description: Transaldolase, active site
Protein sequence:
MFRIVNGEDYSPAVQQRNILDFGKAPSLLWTDNGSSNDRCDTGGNCRESGQDRVKRPMNAFIVWSRDQRRKVALENPQMQNSEISKRLGYDWKMLTEAEKQPFFEEAQRLRAMHRDKYPGYKYRPRRKAKEATEIASRRLFSTVQPNAHRGDLVPLHIQGHTFTNGKPVKPLTAHEHKQLTPATGASQQSDKPAPQ

Annotated regions:
phrase: RVKRPMNAFIVWSRDQRRKVALENPQMQNSEISKRLGYDWKMLTEAEKQPFFEEAQRLRAMHRDKYPGYK
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain

phrase: VKRPMNAFIVWSRDQRRKVALENPQMQNSEISKRLGYDWKMLTEAEKQPFFEEAQRLRAMHRDKYPGY
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain

phrase: VKRPMNAFIVWSRDQRRKVALENPQMQNSEISKRLGYDWKMLTEAEKQPFFEEAQRLRAMHRDKYPGY
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain
Protein sequence:
MVLIKEREMEIPVIDFAELDGEKRSKTMSLLDHACDKWGFFMVDNHGIDKELMEKVKKMINSHYEEHLKEKFYQSEMVKALSEGKTSDADWESSFFISHKPTSNICQIPNISEELSKTMDEYVCQLHKFAERLSKLMCENLGLDQEDIMNAFSGPKGPAFGTKVAKYPECPRPELMRGLREHTDAGGIILLLQDDQVPGLEFFKDGKWVPIPPSKNNTIFVNTGDQLEILSNGRYKSVVHRVMTVKHGSRLSIATFYNPAGDAIISPAPKLLYPSGYRFQDYLKLYSTTKFGDKGPRLETMKKMGNADSA

Annotated regions:
phrase: PAFGTKVAKYPECPRPELMRGLREHTDAGGIILLLQDDQVPGLEFFKDGKWVPIPPSKNNTIFVNTGDQLEILSNGRYKSVVHRVMTVKHGSRLSIATFYN
type: DOMAIN
name: Oxoglu/Fe-dep_dioxygenase_dom
description: Oxoglutarate/iron-dependent dioxygenase domain

phrase: IPVIDFAELDGEKRSKTMSLLDHACDKWGFFMVDNHGIDKELMEKVKKMINSHYEEHLKEKFYQSEMVKALSEGKTSDADWESSFFISHK
type: DOMAIN
name: DIOX_N
description: Non-haem dioxygenase N-terminal domain

phrase: AKYPECPRPELMRGLREHTDAGGIILLLQDDQVPGLEFFKDGKWVPIPPSKNNTIFVNTGDQLEILSNGRYKSVVHRVMTVKHGSRLSIATFYN
type: DOMAIN
name: IPNS-like_FE2OG_OXY
description: Isopenicillin N synthase-like, Fe(2+) 2OG dioxygenase domain
Protein sequence:
MKVGIIGAMEQEVTLLRDRIENRQTLRLASGEIYTGRLHGVEVALLKSGIGKVSAAMGTTLLLDHCRPDVVINTGSAGGLASTLRVGDIVISDEVRYHDADVTAFGYQPGQMAGCPAAFSADAALIALAERCIIALQLNAVRGLICSGDAFINGAEPLARIRRTFPQVAAVEMEAAAIGHVCHAFQTPFVVVRAISDVADQESHISFDEFLKVAAEQSTLMVEAMLRAMASQ

Annotated regions:
phrase: KVGIIGAMEQEVTLLRDRIENRQTLRLASGEIYTGRLHGVEVALLKSGIGKVSAAMGTTLLLDHCRPDVVINTGSAGGLASTLRVGDIVISDEVRYHDADVTAFGYQPGQMAGCPAAFSADAALIALAERCIIALQLNAVRGLICSGDAFINGAEPLARIRRTFPQVAAVEMEAAAIGHVCHAFQTPFVVVRAISDVADQESHISFDEFLKVAAEQSTLMVEAML
type: DOMAIN
name: Nucleoside_phosphorylase_d
description: Nucleoside phosphorylase domain
Protein sequence:
MKNVGIKKAALQMSRYVLASKQVQRALKLLGLPASRANEVSGIPKPADTSLSFPGYEAFALHGEAWQAAGEQKPIILMFGVHPWKRDVLARYFSDFRVAYVRTNTSWTKVQTSFCQFTPQAFVFWGMTEIRAAKNYAIKSSIPLWRVEDGFLRSVGLGAQHVLPLSLAVDTTGIYFDPSRPSTLETLISEIGVTENATLIERARRCMSMISAFGLSKYNVGQDVPLKRLPPSDRRRVLVVGQVEDDASIVMGCAARYTNNDIVRITQKENPEAEVIYRPHPDVLGGHRKEFSNPRDVANICTILSGDYDLGSLLDSVDHVYTITSLLGFEALIRRKKVTVFGAPFYSGWGLTDDRQPTPRRTRKPSLDELFAAAYILYPRYCVGSLGSSAEIEHAIMSLALEKNGVPRELAEGVSSALPAEAINVDCVSQTLEGLKSIPS

Annotated regions:
Protein sequence:
MRLLVVGKLNGQLSVAVKMAMNAGAKVSHVETTEQATNALRAGQGADLLMVDYVLDIAGLIAANEAERMRVPVVACGVDADPMRAANAIKAGAKEFIPLPPDAELIAAVLAAVTDDEKPMVVRDPAMEQVIKLADQVAPSEASILITGESGSGKEVMARYVHGKSRRAKAPFISVNCAAIPENLLESELFGHEKGAFTGAMARRIGKFEEADGGTLLLDEISEMDVRLQAKLLRAIQEREIDRVGGSKPVKVNIRILATSNRDLAQAVKDGTFREDLLYRLNVVNLRLPPLRERPADVISLCEFFVKKYSAANGIEEKPISAEAKRRLIAHRWPGNVRELENAMHRAVLLSAGPEIEEFAIRLPDGQPMAPAPDVAVARGAQMAADAASRAFVGSTVAEVEQQLIIDTLEHCLGNRTHAANILGISIRTLRNKLKEYSDAGVQVPPPQGGVGAAA

Annotated regions:
phrase: ILITGESGSGKEV
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_1
description: Sigma-54 interaction domain, ATP-binding site 1

phrase: QLIIDTLEHCLGNRTHA
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: ANILGISIRTLRNKLKEYSD
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: WPGNVRELE
type: CONSERVED_SITE
name: Sigma_54_int_dom_CS
description: Sigma-54 interaction domain, conserved site

phrase: MVVRDPAMEQVIKLADQVAPSEASILITGESGSGKEVMARYVHGKSRRAKAPFISVNCAAIPENLLESELFGHEKGAFTGAMARRIGKFEEADGGTLLLDEISEMDVRLQAKLLRAIQEREIDRVGGSKPVKVNIRILATSNRDLAQAVKDGTFREDLLYRLNVVNLRLPPLRERPADVISLCEFFVKKYSAANGIEEKPISAEAKRRLIAHRWPGNVRELENAMHRAV
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: VAEVEQQLIIDTLEHCLGNRTHAANILGISIRTLRNKLKE
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: MRLLVVGKLNGQLSVAVKMAMNAGAKVSHVETTEQATNALRAGQGADLLMVDYVLDIAGLIAANEAERMRVPVVACGVDADPMRAANAIKAGAKEFIPLPPDAELIAA
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: VVRDPAMEQVIKLADQVAPSEASILITGESGSGKEVMARYVHGKSRRAKAPFISVNCAAIPENLLESELFGHEKGAFTGAMARRIGKFEEADGGTLLLDEISEMDVRLQAKLLRAIQEREIDRVGGSKPVKVNIRILATSNRDLAQAVKDGTFREDLLYRLNVVN
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: RLLVVGKLNGQLSVAVKMAMNAGAKVSHVETTEQATNALRAGQGADLLMVDYVLDIAGLIAANEAERMRVPVVACGVDADPMRAANAIKAGAKEFIPLPPDAELIAAVLAAV
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: SEASILITGESGSGKEVMARYVHGKSRRAKAPFISVNCAAIPENLLESELFGHEKGAFTGAMARRIGKFEEADGGTLLLDEISEMDVRLQAKLLRAIQEREIDRVGGSKPVKVNIRILATSNRDLAQAVKDGTFREDLLYRLNVVNLRLPPLRE
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: GKFEEADGGTLLLDE
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_2
description: Sigma-54 interaction domain, ATP-binding site 2
Protein sequence:
MDSNASLPLNVSGGTQATPAGLVVLDVFSYLILVVTFVLGVLGNGLVIWVTGFRMTHTVTTISYLNLALADFSFTSTLPFFIVTKALGGHWPFGWFLCKFVFTIVDINLFGSVFLIALIALDRCICVLHPVWAQNHRNVSLAKKVIVGPWICALLLTLPVIIRVTTLSHPRAPGKMACTFDWSPWTEDPAEKLKVAISMFMVRGIIRFIIGFSTPMSIVAVCYGLIATKIHRQGLIKSSRPLRVLSFVVASFLLCWSPYQIAALIATVRIRELLLGMGKDLRIVLDVTSFVAFFNSCLNPMLYVFMGQDFRERLIHSLPASLERALSEDSAQTSDTGTNSTSAPAEAELQAI

Annotated regions:
phrase: GNGLVIWVTGFRMTHTVTTISYLNLALADFSFTSTLPFFIVTKALGGHWPFGWFLCKFVFTIVDINLFGSVFLIALIALDRCICVLHPVWAQNHRNVSLAKKVIVGPWICALLLTLPVIIRVTTLSHPRAPGKMACTFDWSPWTEDPAEKLKVAISMFMVRGIIRFIIGFSTPMSIVAVCYGLIATKIHRQGLIKSSRPLRVLSFVVASFLLCWSPYQIAALIATVRIRELLLGMGKDLRIVLDVTSFVAFFNSCLNPML
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM
Protein sequence:
MNIRPLHDRVIIKREEVETRSAGGIVLTGSAATKSTRAKVLAVGKGRILENGTVQPLDVKVGDTVIFNDGYGVKAEKIDGEEVLIISENDILAIVE

Annotated regions:
phrase: IRPLHDRVIIKREEVETRSAGGIV
type: CONSERVED_SITE
name: Chaprnonin_Cpn10_CS
description: Chaperonin GroES, conserved site
Protein sequence:
MPRKGSVPKREVLPDPIYGSKVISKLINGIMLDGKKGVAQKIVYDALALINERTGEDALEVFEKAMNNIMPVLEVKARRVGGANYQVPVEVRSDRRQTLGIRWLVNYTRARGEKGMVEKLAKEIIDASNSTGATVKKKEDTHKMAEANKAFAHYRW

Annotated regions:
phrase: PRKGSVPKREVLPDPIYGSKVISKLINGIMLDGKKGVAQKIVYDALALINERTGEDALEVFEKAMNNIMPVLEVKARRVGGANYQVPVEVRSDRRQTLGIRWLVNYTRARGEKGMVEKLAKEIIDASNSTGATVKKKEDTHKMAEAN
type: DOMAIN
name: Ribosomal_uS7_dom
description: Small ribosomal subunit protein uS7 domain

phrase: SKVISKLINGIMLDGKKGVAQKIVYD
type: CONSERVED_SITE
name: Ribosomal_uS7_CS
description: Small ribosomal subunit protein uS7, conserved site
Protein sequence:
MNSSSKLIAVINGFRNSGRFCDINIVINDERINAHKLILSGASEYFSILFSNNFIDSNEYEVNLSHLDYQSVNDLIDYIYGIPLSLTNDNVKYILSTADFLQIGSAITECENYILKNLCSKNCIDFYIYADKYNNKKIESASFNTILQNILRLINDENFKYLTEESMIKILSDDMLNIKNEDFAPLILIKWLESTQQPCTVELLKCLRISLLSPQVIKSLYSHRLVSSIYECITFLNNIAFLDESFPRYHSIELISIGISNSRDKISINCYNHKKNTWEMISSRRYRCSFAVAVLDNIIYMMGGYDQSPYRSSKVIAYNTCTNSWIYDIPELKYPRSNCGGLADDEYIYCIGGIRDQDSSLTSSIDKWKPSKPYWQKYAKMREPKCDMGVAMLNGLIYVIGGIVKGDTCTDALESLSEDGWMKHQRLPIKMSNMSTIVHDGKIYISGGYNNSSVVNVISNLVLSYNSIYDEWTKLSSLNIPRINPALWSTHNKLYVGGGISDDVRTNTSETYDKEKDCWTLDNGHVLPRNYIMYKCEPIKHKYPLEKTQYTNDFLKYLESFIGS

Annotated regions:
phrase: NGFRNSGRFCDINIVINDERINAHKLILSGASEYFSILFSNNFIDSNEYEVNLSHLDYQSVNDLIDYIYGIPLSLTNDNVKYILSTADFLQIGSAITECENYILK
type: DOMAIN
name: BTB/POZ_dom
description: BTB/POZ domain

phrase: CDINIVINDERINAHKLILSGASEYFSILFSNNFIDSNEYEVNLSHLDYQSVNDLIDYIYGIPLSLTNDNVKYILSTADFLQIGSAITECENYILKN
type: DOMAIN
name: BTB/POZ_dom
description: BTB/POZ domain

phrase: GISNSRDKISINCYNHKKNTWEMISSRRYRCSFAVAVLD
type: REPEAT
name: Kelch_1
description: Kelch repeat type 1

phrase: LIYVIGGIVKGDTCTDALESLSEDGWMKHQRLPIKMSNMSTIVHD
type: REPEAT
name: Kelch_1
description: Kelch repeat type 1

phrase: KIYISGGYNNSSVVNVISNLVLSYNSIYDEWTKLSSLNIPRINPALWSTH
type: REPEAT
name: Kelch_1
description: Kelch repeat type 1

phrase: YIYCIGGIRDQDSSLTSSIDKWKPSKPYWQKYAKMREPKCDMGVAMLN
type: REPEAT
name: Kelch_1
description: Kelch repeat type 1

phrase: IIYMMGGYDQSPYRSSKVIAYNTCTNSWIYDIPELKYPRSNCGGLADD
type: REPEAT
name: Kelch_1
description: Kelch repeat type 1

phrase: CDINIVINDERINAHKLILSGASEYFSILFSNNFIDSNEYEVNLSHLDYQSVNDLIDYIYGIPLSLT
type: DOMAIN
name: BTB/POZ_dom
description: BTB/POZ domain

phrase: CIDFYIYADKYNNKKIESASFNTILQNILRLINDENFKYLTEESMIKILSDDMLNIKNEDFAPLILIKWLESTQQPCTVELLKCLRISLLSPQVIKS
type: DOMAIN
name: BACK
description: BTB/Kelch-associated

phrase: RCSFAVAVLDNIIYMMGGYDQSPYRSSKVIAYNTCTNS
type: REPEAT
name: Kelch_1
description: Kelch repeat type 1

phrase: PRSNCGGLADDEYIYCIGGIRDQDSSLTSSIDKWKPSKPYWQKYAK
type: REPEAT
name: Kelch_1
description: Kelch repeat type 1

phrase: SNMSTIVHDGKIYISGGYNNSSVVNVISNLVLSYNSIYDEWTKLSSL
type: REPEAT
name: Kelch_1
description: Kelch repeat type 1

phrase: CIDFYIYADKYNNKKIESASFNTILQNILRLINDENFKYLTEESMIKILSDDMLNIKNEDFAPLILIKWLESTQQPCTVELLKCLRISLLSPQVIKSLY
type: DOMAIN
name: BACK
description: BTB/Kelch-associated
Protein sequence:
MHDLLNEILDEVRPLLGQGKVADYIPALGGVRPDQLGIAVYGNDGQVFSAGDAETLFSIQSISKVFSLVQAIGHSGEDIWQRLGHEPSGQPFNSLVQLEFEQGRPRNPFINAGALVICDINQARFAAPSLSMRDFVRRLCGNRSITSDSKVAESEYQHRSRNAAAAYLMKSFDNFHGDVEDVLRSYFHHCALSMNCIDLAKAFGFLANQGFCAHSGVQILTARQATQVNSIMATSGLYDEAGNFAYRVGLPGKSGVGGGIVAIVPERASVCVWSPALNAAGNSLVGMAALEKLSARVDWSVF

Annotated regions:
Protein sequence:
MNHLQGKTIILGVTGGIAAYKAAYLTSRLTQKGAVVHVIMTESAKQFITELTFQSLSKQRVYSDTFQERDPASISHIDLAGSADLVLVAPATANMIAKMAHGIADDMLSTTLLATTAPVMVAPAMNVHMYRHPAVVSNMNTLYDRGVQFIEPGDGLLACGYVGKGRLEEPDTIVSVVEAYFAGQAAPESLLLAGKKVLVTAGGTVERIDPVRYISNDSSGKMGFALARAARAMGADVTLIAARTDIAPPQDADIEVVRVESAQQMYEAVAGRFGSADVLVQAAAVADYRPKQAAEAKIKKSVDNMVLELVKTTDILETLGKAKTKQFVIGFAAETGNTEGYARDKLVRKNLDLIVANDVTLAGAGFGTDTNIVSVYDVEGLVFDLPLASKDEVARKVLAVAAGRLNGVLQ

Annotated regions:
phrase: LAGKKVLVTAGGTVERIDPVRYISNDSSGKMGFALARAARAMGADVTLIAARTDIAPPQDADIEVVRVESAQQMYEAVAGRFGSADVLVQAAAVADYRPKQAAEAKIKKSVDNMVLELVKTTDILETLGKAKTKQFVIGFAAETGNTEGYARDKLVRKNLDLIVANDVTLAGAGFGTDTNIVS
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal

phrase: KTIILGVTGGIAAYKAAYLTSRLTQKGAVVHVIMTESAKQFITELTFQSLSKQRVYSDTFQERDPASISHIDLAGSADLVLVAPATANMIAKMAHGIADDMLSTTLLATTAPVMVAPAMNVHMYRHPAVVSNMNTLYDRGVQFIEPGDGLLACGYVGKGRLEEPDTIVSV
type: DOMAIN
name: Flavoprotein
description: Flavoprotein
Protein sequence:
MSWDDAIDGVDRDTPGGRMPRAWNVAARLRAANDDISHAHVADGLPAYAELHCLSDFSFLRGASSAEQLFVRAQHCGYSALAITDECSLAGIVRGLEASRATGVRLIVGSEFALVDGTRFVLLVENAHGYPQLCGLITTARRAASKGAYRLGRAEVQAQFRDVAPGVFALWLPGAQPQAEQGAWLQQVFGERAFLAVELHREQDDVARLQVLQALAQQLGMTALASGDVHMAQRRERIVQDTLTAIRHTLPLAECGAHLFRNGERHLRTRRALGNIYPDGLLQATVELAQRCTFDISKLQYTYPRELVPQGHTPASYLRQLTEAGMRERWPDGVPKKIRDDIENELALIAELEYEAFFLTVQDVVRFARSKDILCQGRGSSANSAVCYALSITSVDPSKTRLLISRFLSKARNEPPDIDVDFEHERREEVLQYVYAKYGRERAALAATVICYRGKSAVRDVAKAFGLPPDQIALLANCYGWGNGETPMEQRIEEAGFDLANPLINKILLVTDHLRDHPRHLSQHVGGFVISDEPLSLLVPVENAAMADRTIIQWDKDDLETMKLLKVDCLALGMLTCIRKTLDLVRGHRHRDYTLATLPDEDAATYKMIQRADTVGVFQIESRAQMAMLPRLKPAEFYDLVIEVAIVRPGPIQGDMVHPYLQRRKDKSLINYPSEGVEQILGPTLGIPLFQEQVMELVIHAGYDPDEADKLRRSMAAWRRGGDMESHRLRIRALMEGKGYASSFIDQIFEQIKGFGSYGFPQSHAASF

Annotated regions:
phrase: ELHCLSDFSFLRGASSAEQLFVRAQHCGYSALAITDECSLAGIVRGLEASRATGVRLIVGSEFALVDGTRFVLLVENAHGYPQLCGLITTARRAASKGAY
type: DOMAIN
name: PHP_dom
description: PHP domain

phrase: AELHCLSDFSFLRGASSAEQLFVRAQHCGYSALAITDECSLAGIVRGLEASRATGVRLIVGSEFALV
type: DOMAIN
name: Pol/His_phosphatase_N
description: Polymerase/histidinol phosphatase, N-terminal

phrase: MLTCIRKTLDLVRGHRHRDYTLATLPDEDAATYKMIQRADTVGVFQIESRAQMAMLPRLKPAEFYDLVIEVAIVRPGPIQGDMVHPYLQRRKDKSLINYPSEGVEQILGPTLGIPLFQEQVMELVIHAGYDPDEADKLRRSMAAWRRGGDMESHRLRIRALM
type: DOMAIN
name: DNA_pol3_finger
description: DNA polymerase III alpha subunit finger domain

phrase: SYLRQLTEAGMRERWPDGVPKKIRDDIENELALIAELEYEAFFLTVQDVVRFARSKDILCQGRGSSANSAVCYALSITSVDPSKTRLLISRFLSKARNEPPDIDVDFEHERREEVLQYVYAKYGRERAALAATVICYRGKSAVRDVAKAFGLPPDQIALLANCYGWGNGETPMEQRIEEAGFDLANPLINKILLVTDHLRDHPRHLSQHVGGFVISDEPLSLLVPVENAAMADRTIIQWDKDDLETMKLLKVDCL
type: DOMAIN
name: DNA_pol3_alpha_NTPase_dom
description: Bacterial DNA polymerase III, alpha subunit, NTPase domain
Protein sequence:
MKFFIDTANLDEIREGVELGLVDGVTTNPSLIARENLPFEELIAEICKIVDGPVSAEVISLDAPGMVAEAKKLASIDEKVVIKVPMTAEGLKAVRQLSAAGIKTNVTLIFSANQALLAAKAGASYVSPFVGRLDDIGVNSADLISDILTIFDNYGYASEVIVASVRGPQHVLDSALLGADIATIPLKTIKQLTKHPLTDKGMEQFLADWEKRTQ

Annotated regions:
phrase: VVIKVPMTAEGLKAVRQ
type: ACTIVE_SITE
name: Transaldolase_AS
description: Transaldolase, active site

phrase: GVTTNPSL
type: ACTIVE_SITE
name: Transaldolase_AS
description: Transaldolase, active site
Protein sequence:
MSRLVDDFFAFLHVERGMSAHTLDAYRRDIGALIAWGVQQAVGEVVALDRAQLQAFVAAEHRRGLSAKSLQRRLSACRGFYAWLVKRGHIAINPAAGLRAPKALRKLPRILDADEAVSFVQIPTDTPLGLRDRALLELFYSSGLRLSELCGLRWGGVDLDAGLVSVLGKGSRQRVVPVGSYALSALREWCASSGGGAQQPVFPGRYGGPISARAVQVRIKQLAQRQGMAKHVHPHMLRHSFASHLLESSGDLRGVQELLGHADITTTQIYTHLDFQYLSKVYDAAHPRARRKAR

Annotated regions:
phrase: ILDADEAVSFVQIPTDTPLGLRDRALLELFYSSGLRLSELCGLRWGGVDLDAGLVSVLGKGSRQRVVPVGSYALSALREWCASSGGGAQQPVFPGRYGGPISARAVQVRIKQLAQRQGMAKHVHPHMLRHSFASHLLESSGDLRGVQELLGHADITTTQIYTHLDF
type: DOMAIN
name: Integrase_catalytic
description: Integrase, catalytic domain

phrase: MSRLVDDFFAFLHVERGMSAHTLDAYRRDIGALIAWGVQQAVGEVVALDRAQLQAFVAAEHRRGLSAKSLQRRLSACRGFYAWL
type: DOMAIN
name: CB
description: Core-binding (CB) domain

phrase: KLPRILDADEAVSFVQIPTDTPLGLRDRALLELFYSSGLRLSELCGLRWGGVDLDAGLVSVLGKGSRQRVVPVGSYALSALREWCASSGGGAQQPVFPGRYGGPISARAVQVRIKQLAQRQGMAKHVHPHMLRHSFASHLLESSGDLRGVQELLGHADITTTQIYTHLDFQYLSKVY
type: DOMAIN
name: Integrase_catalytic
description: Integrase, catalytic domain

phrase: VDDFFAFLHVERGMSAHTLDAYRRDIGALIAWGVQQAVGEVVALDRAQLQAFVAAEHRRGLSAKSLQRRLSACRGFYAWLVKR
type: DOMAIN
name: Integrase_SAM-like_N
description: Integrase, SAM-like, N-terminal
Protein sequence:
MADGPGSPGGGGGSHESGSPRGGGGGGGGGGGGGGVREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGDSKLTAKAGDGSVKKDVLGSHGGSSSSAQGMGQQAAYNQGMGYMQPQYHNGDVSN

Annotated regions:
phrase: FLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWA
type: DOMAIN
name: CBFA_NFYB_domain
description: Transcription factor CBF/NF-Y/archaeal histone domain

phrase: CVSEFISFITSEASDK
type: CONSERVED_SITE
name: Transcrpt_fac_NFYB/HAP3_CS
description: Transcription factor, NFYB/HAP3, conserved site
Protein sequence:
MALRFPRFSQGLAQDPTTRRIWFGIATAHDFESHDDITEERLYQNIFASHFGQLAIIFLWTSGNLFHVAWQGNFESWVQDPLHVRPIAHAIWDPHFGQPAVEAFTRGGALGPVNIAYSGVYQWWYTIGLRTNEDLYTGALFLLFLSAISLIAGWLHLQPKWKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPGSRGEYVRWNNFLDVLPYPQGLGPLFTGQWNLYAQNPDSSSHLFGTSQGAGTAILTLLGGFHPQTQSLWLTDIAHHHLAIAFLFLVAGHMYRTNFGIGHSMKDLLEAHTPPGGRLGRGHKGLYDTINNSIHFQLGLALASLGVITSLVAQHMYSLPAYAFIAQDFTTQAALYTHHQYIAGFIMTGAFAHGAIFFIRDYNPEQNEDNVLARMLDHKEAIKSHLSWVSLFLGFHTLGLYVHNDVMLAFGTPEKQILIEPIFAQWIQSAHGKTSYGFDVLLSSTNGPAFNAGRSIWLPGWLNAVNENSNSLFLTIGPGDFLVHHAIALGLHTTTLILVKGALDARGSKLMPDKKDFGYSFPCDGPGRGGTCDISAWDAFYLAVFWMLNTIGWVTFYWHWKHITLWQGNVSQFNESSTYLMGWLRDYLWLNSSQLINGYNPFGMNSLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLAWAHERTPLANLIRWRDKPVALSIVQARLVGLAHFSVGYIFTYAAFLIASTSGKFG

Annotated regions:
phrase: CDGPGRGGT
type: CONSERVED_SITE
name: PSI_PsaA/B_CS
description: Photosystem I PsaA/PsaB, conserved site