nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSEENTTNNEAAAAEGKAPAGFGIKRVFTKDLSFEVPAGLGAFSLQGQPNVGQDLNTQINRVDDTHYEVVLKVTVTVKMGEDKVAFLAEVHQAGIFQVVGIEGPQLQQVLSTACPQILFPYVRETIDSLAVRGGFAPVLLPQINFDALFVQAVAQAKAQADSQAEADA

Annotated regions:
Protein sequence:
MPCLTSARRQRIPSDFESVLEKILMVDQILSEFVLSKEELEEVMRRMRREMERGLRVETHDEASVKMLPTYVRSTPEGSEVGDFLALDLGGTNFRVMLVKVGEDEERGWKVETKHHMYSIPEDAMTGTAEMLFDYIAGCISDFLDKHNLKHKKLPLGFTFSFPVRHEDLDKGILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYEDRSCEVGMIVGTGCNACYMEEMRKVELVEGEEGRMCVNTEWGAFGDHSELEDFRLEYDRVIDETSLNPGHQLYEKLIGGKYMGELVRLVLLKLVNEDLLFNGEASDLLKTRGAFETRFVSQIESDTGDRKQIYNILSCLGILPSELDCDIVRLACESVSTRAAHLCGAGLAGVINLMRERRCQEELKITVGVDGSVYKLHPHFKERFHKLVWELTPHCEITFIQSEEGSGRGAALISAVACKMAACMLTP

Annotated regions:
phrase: VGMIVGTGCNACYMEEMRKVELVEGEEGRMCVNTEWGAFGDHSELEDFRLEYDRVIDETSLNPGHQLYEKLIGGKYMGELVRLVLLKLVNEDLLFNGEASDLLKTRGAFETRFVSQIESDTGDRKQIYNILSCLGILPSELDCDIVRLACESVSTRAAHLCGAGLAGVINLMRERRCQEELKITVGVDGSVYKLHPHFKERFHKLVWELTPHCEITFIQSEEGSGRGAALISA
type: DOMAIN
name: Hexokinase_C
description: Hexokinase, C-terminal

phrase: VDQILSEFVLSKEELEEVMRRMRREMERGLRVETHDEASVKMLPTYVRSTPEGSEVGDFLALDLGGTNFRVMLVKVGEDEERGWKVETKHHMYSIPEDAMTGTAEMLFDYIAGCISDFLDKHNLKHKKLPLGFTFSFPVRHEDLDKGILLNWTKGFKASGAEGNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCY
type: DOMAIN
name: Hexokinase_N
description: Hexokinase, N-terminal

phrase: LGFTFSFPVRHEDLDKGILLNWTKG
type: BINDING_SITE
name: Hexokinase_BS
description: Hexokinase, binding site
Protein sequence:
MEMVNKIACFVLLCMVVVAPHAEALTCGQVTSTLAPCLPYLMNRGPLGGCCGGVKGLLGQAQTTVDRQTACTCLKSAASSFTGLDLGKAASLPSTCSVNIPYKISPSTDCSKVQ

Annotated regions:
phrase: CGQVTSTLAPCLPYLMNRGPLGGCCGGVKGLLGQAQTTVDRQTACTCLKSAASSFTGLDLGKAASLPSTCSVNIPYKISPSTD
type: DOMAIN
name: Bifunc_inhib/LTP/seed_store
description: Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain

phrase: CGQVTSTLAPCLPYLMNRGPLGGCCGGVKGLLGQAQTTVDRQTACTCLKSAASSFTGLDLGKAASLPSTCSVNIPYKISPSTD
type: DOMAIN
name: Bifunc_inhib/LTP/seed_store
description: Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
Protein sequence:
MGTKQSRASSNDKDPKRLLLGKRQKFSSWDDTLLLGKDPRSLLKRGMRHVSFSLVTKGMTDIPDFLWGLLEVQKLNLSHNQLRVLPPEVGRLTRIVVLNLCGNCLKSLPREVSLLQSLKVLFLNMNCLAEVPAELSLCRNLEVLSMSHNCLSQLPASFADLSRLRKLNLSNNYFAHIPLCVFSLKELDFLHVGSNRLKNIAESIQCLASLQIFIAESNNIHSFPRSLCLVTSLELLNLNNNDIQTLPDELYLLCRLGRIAWNPMDKGLHISHNPLSKPLPELVEGGLEMLYSYLKDKKHN

Annotated regions:
phrase: NLEVLSMSHNCLSQLPASFADL
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: SLELLNLNNNDIQTLPDELYL
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: VQKLNLSHNQLRVLPPEVG
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: LQSLKVLFLNMNCLAEVPAELSL
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LLEVQKLNLSHNQLRVLPPEVGR
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: RNLEVLSMSHNCLSQLPASFA
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LSRLRKLNLSNNYFAHIPLCVFS
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: VTSLELLNLNNNDIQTLPDELYL
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: SLKVLFLNMNCLAEVPAELSLCRNLEVLSMSHNCLSQLPASFADLSRLRKLNLSNN
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat
Protein sequence:
MQLPLTPLSFSGTLLLMAMSNFLLWEHVTSSASPRLSTRNLYQRVVELSHCTHDLASKVFTDFNMKFGKSICRQKLMLYTCHTSSIPTPENREQVHQTNSEDLLKVTISVLQAWEEPVKHMVAAVAALPGTSDAMLSRAKELEERVLGLLEGLKIILNRIHPGAVENDYTFWSGWSDLQSSDEATRNIAFYTMGRCLRRDTHKVDNYLKVLKCRDIHNNNC

Annotated regions:
phrase: CLRRDTHKVDNYLKVLK
type: CONSERVED_SITE
name: Somatotropin_CS
description: Somatotropin hormone, conserved site

phrase: CHTSSIPTPENREQVHQTNSEDLLKVTISVLQA
type: CONSERVED_SITE
name: Somatotropin_CS
description: Somatotropin hormone, conserved site
Protein sequence:
MSGSNPKAAAAASAAGPGGLVAGKEEKKKAGGGVLNRLKARRQAPHHAADDGVGAAVTEQELLALDTIRPEHVLRLSRVTENYLCKPEDNIYSIDFTRFKIRDLETGTVLFEIAKPCVSDQEEDEEEGGGDVDISAGRFVRYQFTPAFLRLRTVGATVEFTVGDKPVSNFRMIERHYFREHLLKNFDFDFGFCIPSSRNTCEHIYEFPQLSEDVIRLMIENPYETRSDSFYFVDNKLIMHNKADYAYNGGQ

Annotated regions:
phrase: EDNIYSIDFTRFKIRDLETGTVLFEIAKPCVSDQEEDEEEGGGDVDISAGRFVRYQFTPAFLRLRTVGATVEFTVGDKPVSNFRMIERHYFREHLLKNFDFDFGFCIPSSRNTCEHIYEFPQLSEDVIRLMIENPYETRSDSFYFVDNKLIMHNKADYA
type: DOMAIN
name: PDED_dom
description: GMP phosphodiesterase, delta subunit
Protein sequence:
MSDKPNAVSSHTTPDVPEVAATPELSTGICAGDYRAALRRHPAGVTVVTLDSGTGPVGFTATSFSSVSLEPPLVSFNIAETSSSINALKAAESLVIHLLGEHQQRLAQRFAGSADQRFADESLWAVLDTGEPVLHGTPSWMRVKVDQLIPVGDHTLVIGLVTRVHAEEDDESAAAPLLYHEGKYYRPTPLGQ

Annotated regions:
phrase: LRRHPAGVTVVTLDSGTGPVGFTATSFSSVSLEPPLVSFNIAETSSSINALKAAESLVIHLLGEHQQRLAQRFAGSADQRFADESLWAVLDTGEPVLHGTPSWMRVKVDQLIPVGDHTLVIGLVTRVHAEEDDESAAAPLLYHEGKYY
type: DOMAIN
name: Flavin_Rdtase-like_dom
description: Flavin reductase like domain

phrase: LRRHPAGVTVVTLDSGTGPVGFTATSFSSVSLEPPLVSFNIAETSSSINALKAAESLVIHLLGEHQQRLAQRFAGSADQRFADESLWAVLDTGEPVLHGTPSWMRVKVDQLIPVGDHTLVIGLVTRVHAEEDDESAAAPLLYHEGKYY
type: DOMAIN
name: Flavin_Rdtase-like_dom
description: Flavin reductase like domain
Protein sequence:
MSTVNELVNLVDETYDISQIEKEIGLDNIALSDLELLATGGYSPLTGFLGKKDYDSVVETLRLANGSVWSIPITLPVTEEVAETLKVGEEVKLVNGGNVYGVIQIEDIFVPDKEKEALLVYKTTDEAHPGVKKLYERPNVYVGGAIVLTKRFENNPFPSYHLDPIETREEFKKRGWKTVVGFQTRNPVHRAHEYIQKSALEIVDGLFLNPLVGETKSDDIPADVRMESYEVLLQNYYPKNRVFLSVFPAAMRYAGPREAIFHALVRKNFGCTHFIVGRDHAGVGDYYGTYEAQEIFANFTVEELGITPLFFEHSFYCTKCEAMASTKTCPHGKEDHVILSGTKVRELLRNGEVPPSTFSRKEVVEVLIKGLKKEVVTE

Annotated regions:
phrase: SQIEKEIGLDNIALSDLELLATGGYSPLTGFLGKKDYDSVVETLRLANGSVWSIPITLPVTEEVAETLKVGEEVKLVNGGNVYGVIQIEDIFVPDKEKEALLVYKTTDEAHPGVKKLYERPNVYVGGAIVLT
type: DOMAIN
name: ATP-Sase_PUA-like_dom
description: ATP-sulfurylase PUA-like domain

phrase: SYHLDPIETREEFKKRGWKTVVGFQTRNPVHRAHEYIQKSALEIVDGLFLNPLVGETKSDDIPADVRMESYEVLLQNYYPKNRVFLSVFPAAMRYAGPREAIFHALVRKNFGCTHFIVGRDHAGVGDYYGTYEAQEIFANFTVEELGITPLFFEHSFYCTKCEAMASTKTCPHGKEDHVILSGTKVRELLRNGEVPPSTFSRKEVVEVLI
type: DOMAIN
name: Sulfurylase_cat_dom
description: Sulphate adenylyltransferase catalytic domain
Protein sequence:
MSLSIDVTSLPSISSSIYKNESSSTTSTLSGKSIGRSEQYISPDAEAFSKYMLSKSPEDIGPSDSASNDPLTSFSIRSNAVKTNADAGVSMDSSTQSRPSSNVGCDQVDFSFNKGIKMNANLDSSISISTISKKEKSKSDHKSRKHYPKIEAESDSDDYVLDDSDSDDGKCKNCKYKRKYFALRMRMKQVAMQLIEDL

Annotated regions:
Protein sequence:
MQAPPSFYEGDTLEVAKKLLGQKLVHIVDGIKRSGIIVEVEAYKGPDDKAAHSYGGRRTDRTEVMFGAPGHAYVYLIYGMYHCFNVITAPVGTPQGVLIRALEPVDGIEEIKLARYNKTDITKAQYKNLTNGPGKLCRALGITLEERGVSLQSDTLHIELVPEEEHISSQYKITAGPRINIDYAEEAVHYPWRFYYEGHPFVSKK

Annotated regions:
Protein sequence:
MPNSTAQYPEKDSWEFLVKSGIAGGTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRHGLYKAIKHIYHVYGLHGLYQGHTATLYRVFPYAGIKFVAYEQVRRVLIRDPEHETHARRFLSGSLAGTCSVFFTYPLELIRVRLAYITNTGKNPTLTQVTKDIFHERDFLCNKKYPGLSRLSKICNFYRGFSVTLTGIFPYAGMSFLAYDLATDFFHKQKIDEWVSTKKSDKKLKTWPELLCGAFAGVCGQTVSYPFEVCRRKMQIGGIRKNKSFLRLKQVVQTTYKEAGMRGFFVGLTIGYIKVIPMVSTSFFVYNHSKALLGID

Annotated regions:
phrase: ETHARRFLSGSLAGTCSVFFTYPLELIRVRLAYITNTGKNPTLTQVTKDIFHERDFLCNKKYPGLSRLSKICNFYRGFSVTLTGIFPYAGMSFLAYDLATD
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier

phrase: ETHARRFLSGSLAGTCSVFFTYPLELIRVRLAYITNTGKNPTLTQVTKDIFHERDFLCNKKYPGLSRLSKICNFYRGFSVTLTGIFPYAGMSFLAYDLATDFFHK
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier

phrase: WEFLVKSGIAGGTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRHGLYKAIKHIYHVYGLHGLYQGHTATLYRVFPYAGIKFVAYEQVRRVLI
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier

phrase: KLKTWPELLCGAFAGVCGQTVSYPFEVCRRKMQIGGIRKNKSFLRLKQVVQTTYKEAGMRGFFVGLTIGYIKVIPMVSTSFFVYNHSKAL
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier

phrase: EFLVKSGIAGGTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRHGLYKAIKHIYHVYGLHGLYQGHTATLYRVFPYAGIKFVAYEQVRR
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier

phrase: LKTWPELLCGAFAGVCGQTVSYPFEVCRRKMQIGGIRKNKSFLRLKQVVQTTYKEAGMRGFFVGLTIGYIKVIPMVSTSFFVYNHSKA
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier
Protein sequence:
MASPITPPRGMRDFLPAEKARREHALGVIRRSFSAHGFDEIETPVAEDVARLHAGLGGDNEKLAFSVLKRGLSGDDLRAAIESGDTLSLCDLGLRFDLTVPLARFFASHRAELSPVFRSLQIAPVWRAERPQKGRYRQFVQCDIDIVGEASQLAEAELITATAATLDALGLKDCTIRVNDRRILNALLQHCGFAEARWPRALISIDKLDKIGAEGVVAELSEGAADAAAALGGVLAGFEPHLADGGVELTAQAILRILPAGVDTAAIGELETLAHALGALPTGVRLRFDPKLVRGMGYYTGVIFEIAHPGSGSSVGGGGRYDGMIGRFLGTEVPACGFSIGFERVVDLIELPESAGPDSVVLVYDPAMPIGRLLAIKSDLAAAGRRVRLDRRAKNLKAVLDRAAAAGFRSFAFVDADTPAVALDLKPLTEL

Annotated regions:
phrase: EKARREHALGVIRRSFSAHGFDEIETPVAEDVARLHAGLGGDNEKLAFSVLKRGLSGDDLRAAIESGDTLSLCDLGLRFDLTVPLARFFASHRAELSPVFRSLQIAPVWRAERPQKGRYRQFVQCDIDIVGEASQLAEAELITATAATLDALGLKDCTIRVNDRRILNALLQHCGFAEARWPRALISIDKLDKIGAEGVVAELSEGAADAAAALGGVLAGFEPHLADGGVELTAQAILRILPAGVDTAAIGELETLAHALGALPTGVRLRFDPKLVRGMGYYTGVIFEIAHPGSGSSVGGGGRYDGMIGRFLGTEVPACGFSIGFERVVDLI
type: DOMAIN
name: HisRS-like_core
description: Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain

phrase: IRRSFSAHGFDEIETPVAEDVARLHAGLGGDNEKLAFSVLKRGLSGDDLRAAIESGDTLSLCDLGLRFDLTVPLARFFASHRAELSPVFRSLQIAPVWRAERPQKGRYRQFVQCDIDIVGEASQLAEAELITATAATLDALGLKDCTIRVNDRRILNALLQHCGFAEARWPRALISIDKLDKIGAEGVVAELSEGAADAAAALGGVLAGFEPHLADGGVELTAQAILRILPAGVDTAAIGELETLAHALGALPTGVRLRFDPKLVRGMGYYTGVIFEIAHPGSGSSVGGGGRYDGMIGRFLGTEVPACGFSIGFERVVDLIELPESAGPDSVVLVYD
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: GMRDFLPAEKARREHALGVIRRSFSAHGFDEIETPVAEDVARLHAGLGGDNEKLAFSVLKRGLSGDDLRAAIESGDTLSLCDLGLRFDLTVPLARFFASHRAELSPVFRSLQIAPVWRAERPQKGRYRQFVQCDIDIVGEASQLAEAELITATAATLDALGLKDCTIRVNDRRILNALLQHCGFAEARWPRALISIDKLDKIGAEGVVAELSEGAADAAAALGGVLAGFEPHLADGGVELTAQAILRILPAGVDTAAIGELETLAHALGALPTGVRLRFDPKLVRGMGYYTGVIFEIAHPGSGSSVGGGGRYDGMIGRFLGTEVPACGFSIGFER
type: DOMAIN
name: HisRS-like_core
description: Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain
Protein sequence:
MKLTLVQIFFMMLLLLLGLGVGLGLGLQMAAAVLEESDQLLDEFLSSDSQDKAEATKEGLDSQSTETLLVSNKVVPPEDTIVNEDDVGGDRMLRAEVLSQSNKHYLRSDVMDRECNALMAPNLKSKDHPCIPQYVFIHEEPDTVKAVCKSPAVACDLKEGKCHKSPRPFDLTFCKLSKSGQVIPHCNYVTFILEKYILMSCSDMKVQITSKS

Annotated regions:
phrase: AEVLSQSNKHYLRSDVMDRECNALMAPNLKSKDHPCIPQYVFIHEEPDTVKAVCKSPAVACDLKEGKCHKSPRPFDLTFCKLSKSGQVIPHCNYVTFILEKYILMSCSDMK
type: DOMAIN
name: RNaseA_domain
description: Ribonuclease A-domain

phrase: YLRSDVMDRECNALMAPNLKSKDHPCIPQYVFIHEEPDTVKAVCKSPAVACDLKEGKCHKSPRPFDLTFCKLSKSGQVIPHCNYVTFILEKYILMSCS
type: DOMAIN
name: RNaseA_domain
description: Ribonuclease A-domain
Protein sequence:
MTQGKLSVANKAPGTEGQQQVHGEKKEAPAVPSAPPSYEEATSGEGMKAGAFPPAPTAVPLHPSWAYVDPSSSSSYDNGFPTGDHELFTTFSWDDQKVRRVFVRKVYTILLIQLLVTLAVVALFTFCDPVKDYVQANPGWYWASYAVFFATYLTLACCSGPRRHFPWNLILLTVFTLSMAYLTGMLSSYYNTTSVLLCLGITALVCLSVTVFSFQTKFDFTSCQGVLFVLLMTLFFSGLILAILLPFQYVPWLHAVYAALGAGVFTLFLALDTQLLMGNRRHSLSPEEYIFGALNIYLDIIYIFTFFLQLFGTNRE

Annotated regions:
Protein sequence:
MIKSELVDFVAAKNPYLHRRDAENAVDAVLDEITGALERGERVDIRSFGTFVVRHRPARSGRNPLNGNAVFIEEKWVPFFRAGKEIRDRLNTAEKSQGRGNL

Annotated regions:
phrase: SFGTFVVRHRPARSGRNPL
type: CONSERVED_SITE
name: Histone-like_DNA-bd_CS
description: Histone-like DNA-binding protein, conserved site
Protein sequence:
MLRIAVQSKGRLYDETMMLLEEAGIKLNRGKRILLLSAKGFPVEVLFLRDDDIPQSVANGVADIGIVGENEYVEKGQEAKLIKRLGFSKCRLSLAIPKDEEYKGAEWFEGKTIATSYPAILRSFLEERGVKADIHVISGSVEIAPGIGLADAIFDIVSSGSTLVSNQLREVEVVLPCEALLIANNNLSKEKLEILDELLFRFEAIQVAEGKKYVLLNAPKEKLDEIIEVLPGMKSPTITPLANDEWVSVQSVIAEKHFWEIIGKLKSLGAEGILVLPIEKMIV

Annotated regions:
phrase: RDDDIPQSVANGVADIGIVGENEYVEKGQEAKLIKRLGFSKCRLSLAIPKDEEYKGAEWFEGKTIATSYPAILRSFLEERGVKADIHVISGSVEIAPGIGLADAIFDIVSSGSTLVSNQLREVEVVLPCEALLIANNNLSKEKLEILDELLFRF
type: DOMAIN
name: ATP_PRibTrfase_cat
description: ATP phosphoribosyltransferase, catalytic domain

phrase: EIAPGIGLADAIFDIVSSGST
type: CONSERVED_SITE
name: ATP_PRibTrfase_CS
description: ATP phosphoribosyltransferase, conserved site

phrase: NNLSKEKLEILDELLFRFEAIQVAEGKKYVLLNAPKEKLDEIIEVLPGMKSPTITPLANDEWVSVQSVIAEKHFWEIIGKLKSLGAEGILVLPIEKM
type: DOMAIN
name: HisG_C
description: Histidine biosynthesis HisG, C-terminal

phrase: AEGKKYVLLNAPKEKLDEIIEVLPGMKSPTITPLANDEWVSVQSVIAEKHFWEIIGKLKSLGAEGILVLPIE
type: DOMAIN
name: HisG_C
description: Histidine biosynthesis HisG, C-terminal

phrase: LRIAVQSKGRLYDETMMLLEEAGIKLNRGKRILLLSAKGFPVEVLFLRDDDIPQSVANGVADIGIVGENEYVEKGQEAKLIKRLGFSKCRLSLAIPKDEEYKGAEWFEGKTIATSYPAILRSFLEERGVKADIHVISGSVEIAPGIGLADAIFDIVSSGSTLVSNQLREVEVVLPCEALLI
type: DOMAIN
name: ATP_PRibTrfase_cat
description: ATP phosphoribosyltransferase, catalytic domain
Protein sequence:
MSVPFDPASYDRQLEEKTVRLRELLAPFDAPEPQVFDSPREHYRLRAEFRLWREDQKRYYAMFAPGDNRTPILLEGLPIASERINALMPVLRERWEASPTLNHKLFQVDFLTTLAGDAMITLCYHRPLDAEWQAAAAQLAAELDVSLIGRSKGQKLVIGHDYVTEKLDVAGRTFSYRQPEGAFTQPNGTVNGKMLNWAFDALGERQDDLLELYCGNGNFTLPLATRVRKVLATEISKTSVNAALSNLDDNGVDNVTLVRLSAEELTEALNEVRPFRRLHGVDLKSYDFGSVFVDPPRAGMDPDTCELTRRFERILYISCNPETLAANIAQLHDTHRVERCALFDQFPYTHHMESGVLLVRR

Annotated regions:
phrase: FDQFPYTHHM
type: CONSERVED_SITE
name: MeTrfase_TrmA_CS
description: RNA methyltransferase TrmA, conserved site

phrase: DPPRAGMDPDTCELTRRFERILYISCNPE
type: ACTIVE_SITE
name: MeTrfase_TrmA_AS
description: RNA methyltransferase TrmA, active site
Protein sequence:
MRSSVSVWRGICKMGDHIATQSLSAAHRAAATPIVIVGHVDHGKSTLIGRLLYDTDSLQDGKLAQIVESSRKRGLAVEWSFLLDSLQIERDQGVTVDSTRIPFRLGSREFVIVDAPGHRQFLRNMITGAADAEAAVLVVDAQEGAQEQTRRHAMLLRLIGIRHVIVLLNKSDVLSFDESKIVQAESDVRQLLGRLEIEVEAVVPASARDGDNIASRSERSAWYKGPTLIEALANVPPPASRLALPFRMPVQDVYRFDGVRYVAGRIERGTVRAGDRLTIGVQGQIATVAEVCRWHAPELPVAGAGESIALRLEPDLVPDRGDLLFPADDKAAAPERSARIRTRLFWLRGEPLRVGESFTLRLATAEHDVTVASIDAVVDLDDLTLRQGDEVPPDGFAEITLAASHAVLFDPFSPGFGDGRGVLVDRHQRIVGGAPLIGPADLEDGVHAIHPTASRISAGQQAQARGHKSGVFWLTGLPGSGKSTVARAAEVSLAAQSVKATVLDGDTLRAGLCSDLGFSPEDRRENIRRAAHVAKILSESGQAVIVALVSPLQADRDLARQIVGEGFHEVFVDTPLATCEQRDPKGLYAAARAGKIPEFTGVSAPYEAPLSPELRLGADRTEAETVSELTGFVLRVVQP

Annotated regions:
phrase: PIVIVGHVDHGKS
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: DQGVTVDS
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: VIVDAPGHRQ
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: TGAADAEAAVL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: VIVLLNKSD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: IVIVGHVDHGKSTLIGRLLYDTDSLQDGKLAQIVESSRKRGLAVEWSFLLDSLQIERDQGVTVDSTRIPFRLGSREFVIVDAPGHRQFLRNMITGAADAEAAVLVVDAQEGAQEQTRRHAMLLRLIGIRHVIVLLNKSDVLSFDESKIVQAESDVRQLLGRLEIEVEAVVPASARDGDNI
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: PIVIVGHVDHGKSTLIGRLLYDTDSLQDGKLAQIVESSRKRGLAVEWSFLLDSLQIERDQGVTVDSTRIPFRLGSREFVIVDAPGHRQFLRNMITGAADAEAAVLVVDAQEGAQEQTRRHAMLLRLIGIRHVIVLLNKSDVLSFDESKIVQAESDVRQLLGRLEIEVEAVVPASARDGDNIASRSERSAWYKGPTLIEALANVPPP
type: DOMAIN
name: CysN_GTP-bd
description: Sulfate adenylyltransferase subunit CysN, GTP-binding domain

phrase: AAATPIVIVGHVDHGKSTLIGRLLYDTDSLQDGKLAQIVESSRKRGLAVEWSFLLDSLQIERDQGVTVDSTRIPFRLGSREFVIVDAPGHRQFLRNMITGAADAEAAVLVVDAQEGAQEQTRRHAMLLRLIGIRHVIVLLNKSDVLSFDESKIVQAESDVRQLLGRLEIEVEAVVPASARDGDNIASRSERSAWYKGPTLIEALANVPPPA
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: DSLQIERDQGVTVDS
type: CONSERVED_SITE
name: G_TR_CS
description: Tr-type G domain, conserved site

phrase: IVIVGHVDHGKSTLIGRLLYDTDSLQDGKLAQIVESSRKRGLAVEWSFLLDSLQIERDQGVTVDSTRIPFRLGSREFVIVDAPGHRQFLRNMITGAADAEAAVLVVDAQEGAQEQTRRHAMLLRLIGIRHVIVLLNKSDVLSFDESKIVQAESDVRQLLGRLEIEVEAVVPASARDGDNIASRSERSAWYKGPTLIEALA
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain
Protein sequence:
MGSHSTGLEETLGVLPSWLFCKMLRFLKRPLVVTVDINLNLVALTGLGLLTRLWQLSYPRAVVFDEVYYGQYISFYMKRIFFLDDSGPPFGHMLLALGGWLGGFDGNFLWNRIGAEYSSNVPIWSLRLLPALAGALSVPMAYQIVLELHFSHGAAIGAALLMLIENALITQSRLMLLESILIFFNLLAVLSYLKFFNSQTHSPFSVHWWLWLLLTGVSCSCAVGIKYMGIFTYLLVLGIAAVHAWNLIGDQTLSNMRVLSHLLARIVALLVVPVFLYLLFFYVHLMLLYRSGPHDQIMSSAFQASLEGGLARITQGQPLEVAFGSQVTLKSVSGKPLPCWLHSHKNTYPMIYENGRGSSHQQQVTCYPFKDINNWWIVKDPGRHQLVVNNPPRPVRHGDIVQLVHGMTTRLLNTHDVAAPLSPHSQEVSCYIDYNISMPAQNLWKLDIVNRESNRDTWKTILSEVRFVHVNTSAILKLSGAHLPDWGFRQLEVVGEKLSPGYHESMVWNVEEHRYGKSHEQKERELELHSPTQLDISRNLSFMARFSELQWKMLTLKNEDLEHQYSSTPLEWLTLDTNIAYWLHPRTSAQIHLLGNIVIWTSASLATVVYTLLFFWYLLRRRRSICDLPEDAWSRWVLAGALCTGGWALNYLPFFLMERVLFLYHYLPALTFQILLLPIVLQHASDHLCRSQLQRNVFSALVVAWYSSACHVSNMLRPLTYGDTSLSPGELRALRWKDSWDILIRK

Annotated regions:
phrase: PLEVAFGSQVTLKSVSGKPLPCWLHSHKNTYPMIYENGRGSSHQQQVTCYPFKDINNWWIVKD
type: DOMAIN
name: MIR_motif
description: MIR motif

phrase: LHSHKNTYPMIYENGRGSSHQQQVTCYPFKDINNWWIVKDPGRHQLVVNNPPRPVRHGDIVQLVHGMTTRLLNTHDVAAPLSPHSQEVSCYIDYNISMPAQNLWKLDIVNRESNRDTWKTILSEVRFVHVNTSAILKLSGAHLPDWGFRQLEV
type: DOMAIN
name: MIR_motif
description: MIR motif

phrase: PRPVRHGDIVQLVHGMTTRLLNTHDVAAPLSPHSQEVSCYIDYNISMPAQNLWKLDI
type: DOMAIN
name: MIR_motif
description: MIR motif

phrase: ALTGLGLLTRLWQLSYPRAVVFDEVYYGQYISFYMKRIFFLDDSGPPFGHMLLALGGWLGGFDGNFLWNRIGAEYSSNVPIWSLRLLPALAGALSVPMAYQIVLELHFSHGAAIGAALLMLIENALITQSRLMLLESILIFFNLLAVLSYLKFFNSQTHSPFSVHWWLWLLLTGVSCSCAVGIKYMGIFTYLLVLGIAAVHAWNLIGDQTLSNMRVLSHLLARIVALLVVPVFLYLLFFYVHLMLL
type: DOMAIN
name: Glyco_trans_39/83
description: Glycosyl transferase family 39/83

phrase: DTWKTILSEVRFVHVNTSAILKLSGAHLPDWGFRQLEVVGEKLSPGYHESMVWNVEE
type: DOMAIN
name: MIR_motif
description: MIR motif

phrase: PLEVAFGSQVTLKSVSGKPLPCWLHSHKNTYPMIYENGRGSSHQQQVTCYPFKDINNWWIVKD
type: DOMAIN
name: MIR_motif
description: MIR motif

phrase: PRPVRHGDIVQLVHGMTTRLLNTHDVAAPLSPHSQEVSCYIDYNISMPAQNLWKLDI
type: DOMAIN
name: MIR_motif
description: MIR motif

phrase: SNRDTWKTILSEVRFVHVNTSAILKLSGAHLPDWGFRQLEVVGEKLSPGYHESMVWNVEE
type: DOMAIN
name: MIR_motif
description: MIR motif

phrase: FMARFSELQWKMLTLKNEDLEHQYSSTPLEWLTLDTNIAYWLHPRTSAQIHLLGNIVIWTSASLATVVYTLLFFWYLLRRRRSICDLPEDAWSRWVLAGALCTGGWALNYLPFFLMERVLFLYHYLPALTFQILLLPIVLQHASDHLCRSQLQRNVFSALVVAWYSSACHVSNMLRPLTYGDTSLSPGELRALRWKDS
type: DOMAIN
name: PMT_4TMC
description: Protein O-mannosyl-transferase, C-terminal four TM domain
Protein sequence:
MVPSLALVPGEPAGIGPELCVRLAQRPRPDAHLIAYADPDTLHSAAKSLSLSVRLLDPDQPARAPGDLPLHPVRQAVATRFGAPDPANAAAVIAGLRGAADACLTGRLQGIVTGPVHKAVINAGGIPYTGTTELLADHAGCPVVMMLANSIVRVALVTTHLPLRAVADAITADALQQCLRITHAAMQRDFGLEDPRIAVLGLNPHAGEDGLLGREELDIVIPVIEQLRGDGMHLIGPLPADTAFLPQKLGGFDAVVAMYHDQGLPVLKYSGFEQAVNITLGLPYPRVAVDHGTALELAGRRIADPSSLMAATALCARLAARR

Annotated regions:
Protein sequence:
MKKVYSKIESINGSVITVKADGVSYGELAEVQTRFGASLAEVNKLEGDLVSLQVFAGGRGVSTGDEVRFLGKEMQVSYSEDLLGRIFNGSGDPRDSGPALKDNMIPIGGPSVNPSKRILANRMIRTGIPMIDVFNTLVVSQKLPIFSSSGEPYNELLARIAMQAEVDVIILGGMGLKYDDYLYFKDTLEEAGALSRTAMFVHTAADPTVECLMIPDMCLAVAEKFAIAGKNVLVLLTDMTNFADAMKEIAIIQEQVPSNRGYPGDLYSQLAARYEKAVDFADAGSVTVLAVTTMPGDDVTHPVPDNTGYITEGQFYLKNGRIEPFGSLSRLKQNVNGKTRDDHRALMDNMIKLYASYKDTLEKKSMGFMMSEWDEKLLKYGAKFESGMMDLSVNIPLEDALNLGWKILAECFTREETGIKSELVNKYWPAN

Annotated regions:
phrase: IESINGSVITVKADGVSYGELAEVQTRFGASLAEVNKLEGDLVSLQVFAGGRGVSTGDEVRFL
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_N
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain

phrase: GIPMIDVFNTLVVSQKLPIFSSSGEPYNELLARIAMQAEVDVIILGGMGLKYDDYLYFKDTLEEAGALSRTAMFVHTAADPTVECLMIPDMCLAVAEKFAIAGKNVLVLLTDMTNFADAMKEIAIIQEQVPSNRGYPGDLYSQLAARYEKAVDFADAGSVTVLAVTTMPGDDVTHPVPDNTGYITEGQFYLK
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_nucl-bd
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain

phrase: VNGKTRDDHRALMDNMIKLYASYKDTLEKKSMGFMMSEWDEKLLKYGAKFESGMMDLSVNIPLEDALNLGWKILAECFTREETGIKSELVNKY
type: DOMAIN
name: ATP-synt_VA_C
description: ATP synthase A/B type, C-terminal domain
Protein sequence:
MSLLTEVETYVLSIVPSGPLKAEIAQRLEDVFAGKNTDLEALMEWLKTRPILSPLTKGILGFVFTLTVPSERGLQRRRFVQNALNGNGDPNNMDKAVKLYRKIKREITFHGAKEIALSYSAGALASCMGLIYNRMGAVTTEVAFGLVCATCEQIADSQHRSHRQMVTTTNPLIRHENRMVLASTTAKAMEQMAGSSERAAEAMEVASQARQMVQAMRTIGTHPSSSAGLKDDLLENLQAYQKRMGVQMQRFK

Annotated regions:
phrase: QHRSHRQMVTTTNPLIRHENRMVLASTTAKAMEQMAGSSERAAEAMEVASQARQMVQAMRTIGTHPSSSAGLKDDLLENLQAYQKRMGVQMQRF
type: DOMAIN
name: Flu_matrix_M1_C
description: Influenza matrix M1, C-terminal

phrase: QHRSHRQMVTTTNPLIRHENRMVLASTTAKAMEQMAGSSERAAEAMEVASQARQMVQAMRTIGTHPSSSAGLKDDLLENLQAYQKRMGVQMQRF
type: DOMAIN
name: Flu_matrix_M1_C
description: Influenza matrix M1, C-terminal

phrase: SLLTEVETYVLSIVPSGPLKAEIAQRLEDVFAGKNTDLEALMEWLKTRPILSPLTKGILGFVFTLTVPSERGLQRRRFVQNALNGNGDPNNMDKAVKLYRKIKREITFHGAKEIALSYSAGALASCMGLIYNRMGAVTTEVAFGLVCATCEQIAD
type: DOMAIN
name: Flu_matrix_M1_N
description: Influenza matrix M1, N-terminal
Protein sequence:
MGIYDIFDDESARSISGMSIDEMAKKYGTPVIIYSRARIVSNIRRIREAYENRVRMLYSVKANDNPRIIEIMHQESIGSDSASPMEIMMSIFSGIPPEDILYSPNNASEYDLNFALDRGIAINFNTFTQYRKMREKPERISFRINPGFGMGEFAGTTTGGARTKFGIDPDAAILAYRKAREDGIREFGIHMMIGSNNRDHVKIAEAYSNFFRIADRIGREAGVSFQFADVGGGLGIPYVQGENELDIAALGSAVLKEFDRYHFGDLVLEPGRYLVGDAGIIVGTVNDVHNGFAGTDIGMNLNIRPALYGARHTIIPVGERVEGEKITVTGQICENTDRIGDTAWRLSEGDRIMVLDAGAYVYSMSSRYNGRPRPPEIMIMEDGKDVMIRRREDFSDFIATVV

Annotated regions:
phrase: ARIVSNIRRIREAYENRVRMLYSVKANDNPRIIEIMHQESIGSDSASPMEIMMSIFSGIPPEDILYSPNNASEYDLNFALDRGIAINFNTFTQYRKMREKPERISFRINPGFGMGEFAGTTTGGARTKFGIDPDAAILAYRKAREDGIREFGIHMMIGSNNRDHVKIAEAYSNFFRIADRIGREAGVSFQFADVGGGLGIPYVQGENELDIAALGSAVLKEFDRYHFGDLVLEPGRYL
type: DOMAIN
name: De-COase2_N
description: Orn/DAP/Arg decarboxylase 2, N-terminal

phrase: GDAGIIVGTVNDVHNGFAGTDIGMNLNIRPALYGARHTIIPVGERVEGEKITVTGQICENTDRIGDTAWRLSEGDRIMVLDA
type: DOMAIN
name: De-COase2_C
description: Orn/DAP/Arg decarboxylase 2, C-terminal
Protein sequence:
MKKLHREICGPVGLVPTMGYLHEGHLSLVRASKKQDINTVASIFVNPTQFGPHEDFKKYPRDEKRDMAMLENTGVDYVFVPSVEDMYPAGFDSWVEPGILQQCLEGAVRPGHFRGVCTVVAKLFTIIRPDRAYFGQKDYQQYLIIKRMASDLNLDVSVEMLPIIRENDGLALSSRNTYLSPAERQAALVLYRSLLTARSLFDEKEHRAEVIRKKMTDVIQHESMAEIDYVSLSHQDTLCESDEVSAKTIALVAARFGKTRLIDNMFLA

Annotated regions:
Protein sequence:
MKKCSIILASVLLATSINAIADTPTPLNQQQPLEKIAPYPQAEKGMSRQVIFLEPQKDESRFKVELLIGKTLNVDCNRHMLGGNLETRTLSGWGFDYLVMDKISQPASTMMACPEDSKPQVKFVTANLGDAAMQRYNSRLPIVVYVPQGVEVKYRIWEAGEDIRSAQVK

Annotated regions:
Protein sequence:
MSQLDVLILDDEESIRNLIAANLKDEGFNPKVAANSTQALKIISEKPVSAVILDIWLQGSEIDGLGVLEIIKKRYPLIPVIIISGHGTIETAVNAIKMGAYDYIEKPFNNDKLIILLKRACEVTKLKRENIDLKSKVIDKTELVGGCSVTLKYKMEIEKAASSSSRIMIHGKVGSGKELAARLIHKQSKRVNNPFIIFSPTCMTTEKINQELFGESEKQENNNKRPTILEFANNGTLYIDEVSNIPIPIQVKLLKFLKDQTITKPCGKKTKVDIKIITSTSKNIQDEVNNGKFLEDLYYRLNVFSLKVPSLYERKEDIPLLVKYFVKQLSKFSGLKERHFSDEAITALQSYEWPGNIRQLRNVVEWTLIMNPLTTGNNEIIKPYMIPSEILANSANLTKLEDSFDMLSMPLREAREVFERQYLSAQMSRFNNNISKTSSFVGMERSALHRKLKLLSLHIPPTNKINEEEYEKANA

Annotated regions:
phrase: SSSRIMIHGKVGSGKELAARLIHKQSKRVNNPFIIFSPTCMTTEKINQELFGESEKQENNNKRPTILEFANNGTLYIDEVSNIPIPIQVKLLKFLKDQTITKPCGKKTKVDIKIITSTSKNIQDEVNNGKFLEDLYYRLNV
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: DVLILDDEESIRNLIAANLKDEGFNPKVAANSTQALKIISEKPVSAVILDIWLQGSEIDGLGVLEIIKKRYPLIPVIIISGHGTIETAVNAIKMGAYDYIEKPFNNDKLIILLKRA
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: LDVLILDDEESIRNLIAANLKDEGFNPKVAANSTQALKIISEKPVSAVILDIWLQGSEIDGLGVLEIIKKRYPLIPVIIISGHGTIETAVNAIKMGAYDYIEKPFNNDKLIIL
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: REVFERQYLSAQMSRFNNNISKTSSFVGMERSALHRKL
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: VLILDDEESIRNLIAANLKDEGFNPKVAANSTQALKIISEKPVSAVILDIWLQGSEIDGLGVLEIIKKRYPLIPVIIISGHGTIETAVNAIKMGAYDYIEKPFNNDKLI
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: TLKYKMEIEKAASSSSRIMIHGKVGSGKELAARLIHKQSKRVNNPFIIFSPTCMTTEKINQELFGESEKQENNNKRPTILEFANNGTLYIDEVSNIPIPIQVKLLKFLKDQTITKPCGKKTKVDIKIITSTSKNIQDEVNNGKFLEDLYYRLNVFS
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: WPGNIRQLR
type: CONSERVED_SITE
name: Sigma_54_int_dom_CS
description: Sigma-54 interaction domain, conserved site

phrase: LVGGCSVTLKYKMEIEKAASSSSRIMIHGKVGSGKELAARLIHKQSKRVNNPFIIFSPTCMTTEKINQELFGESEKQENNNKRPTILEFANNGTLYIDEVSNIPIPIQVKLLKFLKDQTITKPCGKKTKVDIKIITSTSKNIQDEVNNGKFLEDLYYRLNVFSLKVPSLYERKEDIPLLVKYFVKQLSKFSGLKERHFSDEAITALQSYEWPGNIRQLRNVVEWTL
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain