nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTTAHSAPRDNSDKPVIWTVSVTRLFELFRDISLEFDHLATITPIQLGFEKAVTYIRKKLATERCDAIIAAGSNGAYLKSRLSIPVILIKPSGFDVLQALAKAGKLTSSIGIVTYQETIPALLAFQKTFHLRLEQRSYVTEEDARGQINELKANGIEAVVGAGLITDLAEEAGMTAIFIYSAATVRQAFHDALDMTRLTRRQRVDYPSGKGLQTRYELGDIRGQSPQMEQLRQTITLYARSRAAVLIQGETGTGKELAAQAIHQTFFHRQPHRQNKPSPPFVAVNCGAITESLLEAELFGYEEGAFTGSRRGGRAGLFEIAHGGTLFLDEIGEMPLPLQTRLLRVLEEKAVTRVGGHQPIPVDVRVISATHCDLDREIMQGRFRPDLFYRLSILRLTLPPLRERQADILPLAESFLKQSLAAMEIPFTESIRHGLTQCQPLLLAWRWPGNIRELRNMMERLALFLSVDPAPTLDRQFMRQLLPELMVNTAELTPSTVDANALQDVLARFKGDKTAAARYLGISRTTLWRRLKAGAKDQSDN

Annotated regions:
phrase: WPGNIRELR
type: CONSERVED_SITE
name: Sigma_54_int_dom_CS
description: Sigma-54 interaction domain, conserved site

phrase: IRGQSPQMEQLRQTITLYARSRAAVLIQGETGTGKELAAQAIHQTFFHRQPHRQNKPSPPFVAVNCGAITESLLEAELFGYEEGAFTGSRRGGRAGLFEIAHGGTLFLDEIGEMPLPLQTRLLRVLEEKAVTRVGGHQPIPVDVRVISATHCDLDREIMQGRFRPDLFYRLSILRLTLPPLRERQADILPLAESFLKQSLAAMEIPFTESIRHGLTQCQPLLLAWRWPGNIRELRNMMERLA
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: SRAAVLIQGETGTGKELAAQAIHQTFFHRQPHRQNKPSPPFVAVNCGAITESLLEAELFGYEEGAFTGSRRGGRAGLFEIAHGGTLFLDEIGEMPLPLQTRLLRVLEEKAVTRVGGHQPIPVDVRVISATHCDLDREIMQGRFRPDLFYRLSI
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LATITPIQLGFEKAVTYIRKKLATERCDAIIAAGSNGAYLKSRLSIPVILIKPSGFDVLQALAKAGKLTSSIGIVTYQETIPALLAFQKTFHLRLEQRSYVTEEDARGQINELKANGIEAVVGAGLITDLAEEAGMTAIFIYSAATVRQAFHDALDMTRLTRR
type: DOMAIN
name: Sig_transdc_resp-reg_PrpR_N
description: Signal transduction response regulator, propionate catabolism activator, N-terminal

phrase: GLFEIAHGGTLFLDE
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_2
description: Sigma-54 interaction domain, ATP-binding site 2

phrase: RGQSPQMEQLRQTITLYARSRAAVLIQGETGTGKELAAQAIHQTFFHRQPHRQNKPSPPFVAVNCGAITESLLEAELFGYEEGAFTGSRRGGRAGLFEIAHGGTLFLDEIGEMPLPLQTRLLRVLEEKAVTRVGGHQPIPVDVRVISATHCDLDREIMQGRFRPDLFYRLSILR
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: TVDANALQDVLARFKGDKTAAARYLGISRTTLWRRLK
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type
Protein sequence:
MAVTSSSSSQPPAASQPGHFKRLWAYLRPELSSFILAMVAMGVVAATEGIIPKVVKDLLDQGFGGEYAGKLWRVPAMLVGIAVVRGVAQFGATYFLSLVSNKVLLNLRMKMFERLLQAPAAFYQRNTAASLINAVIFEVNQVLQVLTGVFITLVRDSMTVLALLIFLFYTNWRLTLVVAVILPVIGFLMSRINRRLRSLNREHQNLTNEAAYVVEEAAGGYKVVKLHGGEAYESRRFNAMTNRLRGYAMRMAVAGGLNQPVTQFLAALALSVILAIAMVQAQANQTTVGGFTGFVMAMLLLISPLKHLTDVNQPMQRGLTAAEFIFGLIDTPIEPQDGGKHIDRARGDLRFEHVTFRYGPDGRAALDSIDLHVKAGEIVALVGPSGSGKTTLVNLLPRFFEPTSGRIVLDGDALADLSLQDLRRQIAFVSQDVVLFNDTIAANVAYGARDASEIDMARVRRALEAAYLTDVVDNLPDGVDTNIGDNGSKLSGGQRQRLAIARAVYKDAPILILDEATSALDSESERQVQAALEALMQGRTTLVIAHRLSTIENADRIVVLEHGQIVEAGTHRELLDRDGLYAGLHRIQFATQ

Annotated regions:
phrase: ILAMVAMGVVAATEGIIPKVVKDLLDQGFGGEYAGKLWRVPAMLVGIAVVRGVAQFGATYFLSLVSNKVLLNLRMKMFERLLQAPAAFYQRNTAASLINAVIFEVNQVLQVLTGVFITLVRDSMTVLALLIFLFYTNWRLTLVVAVILPVIGFLMSRINRRLRSLNREHQNLTNEAAYVVEEAAGGYKVVKLHGGEAYESRRFNAMTNRLRGYAMRMAVAGGLNQPVTQFLAALALSVILAIAMVQAQANQTTVGGFTGFVMAMLLLISPLKHLTDVNQPMQ
type: DOMAIN
name: ABC1_TM_dom
description: ABC transporter type 1, transmembrane domain

phrase: AGEIVALVGPSGSGKTTLVNLLPRFFEPTSGRIVLDGDALADLSLQDLRRQIAFVSQDVVLFNDTIAANVAYGARDASEIDMARVRRALEAAYLTDVVDNLPDGVDTNIGDNGSKLSGGQRQRLAIARAVYKDAPILILDEATSALDSESERQVQAALEALMQGRTTLVIAHRLSTIENADRIVVLEHGQIVEAG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LSGGQRQRLAIARA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: ILAMVAMGVVAATEGIIPKVVKDLLDQGFGGEYAGKLWRVPAMLVGIAVVRGVAQFGATYFLSLVSNKVLLNLRMKMFERLLQAPAAFYQRNTAASLINAVIFEVNQVLQVLTGVFITLVRDSMTVLALLIFLFYTNWRLTLVVAVILPVIGFLMSRINRRLRSLNREHQNLTNEAAYVVEEAAGGYKVVKLHGGEAYESRRFNAMTNRLRGYAMRMAVAGGLNQPVTQFLAALALSVILAIAMVQAQANQTTVGGFTGFVMAMLLLISP
type: DOMAIN
name: ABC1_TM_dom
description: ABC transporter type 1, transmembrane domain

phrase: LDSIDLHVKAGEIVALVGPSGSGKTTLVNLLPRFFEPTSGRIVLDGDALADLSLQDLRRQIAFVSQDVVLFNDTIAANVAYGARDASEIDMARVRRALEAAYLTDVVDNLPDGVDTNIGDNGSKLSGGQRQRLAIARAVYKDAPILILDEAT
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: LRFEHVTFRYGPDGRAALDSIDLHVKAGEIVALVGPSGSGKTTLVNLLPRFFEPTSGRIVLDGDALADLSLQDLRRQIAFVSQDVVLFNDTIAANVAYGARDASEIDMARVRRALEAAYLTDVVDNLPDGVDTNIGDNGSKLSGGQRQRLAIARAVYKDAPILILDEATSALDSESERQVQAALEALMQGRTTLVIAHRLSTIENADRIVVLEHGQIVEAGTHRELLDRDGLYAGLHR
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain
Protein sequence:
MKQLEKITPRDVDFSQWYTDTVINAKLASYGPVKGTIIFRPYGYAIWELIQKYLDAKFKELEVQNVYFPLLIPQSLFQKEKDHIEGFSPEIATVTRVGDTPLPEPLFIRPTSEVLMANFFKNEVKSYRDLPLIFNQWTNVMRWEKTTRPFLRTSEFLWQEGHTVHSERKEASDLTLKILDTYTEFAQNALLLPVIPGKKTEKEKFAGADSTYTIESLMHDGQALQCGTSHYFADNFSKPYEIKFQNKEGKLEHAYSTSWGVSTRLIGAIIMTHSDDNGLVLPSMVSPVQVRLIQIKETDEVIKVTEDIKEALKNKYRVDIDKTDKSFGFKISEAEIKGIPLRIEIGPRDLENNQVTISRRDTREKIQVNVNEVTNIVDQMIKEYDANLYAKALKNREERTSRANSIEEYKNILAQNQGFVLVPFCGEIECEDDVKKQTSTNSRCIPFDQDNKTEKCFNCNKDTTLKVYFARAY

Annotated regions:
phrase: IEEYKNILAQNQGFVLVPFCGEIECEDDVKKQTSTNSRCIPFDQDNKTEKCFNCNKDTTLKVYFARA
type: DOMAIN
name: Pro-tRNA_ligase_II_C
description: Proline-tRNA ligase, class II, C-terminal

phrase: QVRLIQIKETDEVIKVTEDIKEALKNKYRVDIDKTDKSFGFKISEAEIKGIPLRIEIGPRDLENNQVTISRRDTREKIQVNVNEVTNIV
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: IEEYKNILAQNQGFVLVPFCGEIECEDDVKKQTSTNSRCIPFDQDNKTEKCFNCNKDTTLKVYFARA
type: DOMAIN
name: Pro-tRNA_ligase_II_C
description: Proline-tRNA ligase, class II, C-terminal

phrase: GTIIFRPYGYAIWELIQKYLDAKFKELEVQNVYFPLLIPQSLFQKEKDHIEGFSPEIATVTRVGDTPLPEPLFIRPTSEVLMANFFKNEVKSYRDLPLIFNQWTNVMRWEKTTRPFLRTSEFLWQEGHTVHSERKEASDLTLKILDTYTEFAQNALLLPVIPGKKTEKEKFAGADSTYTIESLMHDGQALQCGTSHYFADNFSKPYEIKFQNKEGKLEHAYSTSWGVSTRLIGAIIMTHSDDNGLVL
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: EPLFIRPTSEVLMANFFKNEVKSYRDLPLIFNQWTNVMRWEKTTRPFLRTSEFLWQEGHTVHSERKEASDLTLKILDTYTEFAQNALLLPVIPGKKTEKEKFAGADSTYTIESLMHDGQALQCGTSHYFADNFSKPYEIKFQNKEGKLEHAYSTSWGVSTRLIGAI
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: DFSQWYTDTVINAKLASYGPVKGTIIFRPYGYAIWELIQKYLDAKFKELEVQNVYFPLLIPQSLFQKEKDHIEGFSPEIATVTRVGDTPLPEPLFIRPTSEVLMANFFKNEVKSYRDLPLIFNQWTNVMRWEKTTRPFLRTSEFLWQEGHTVHSERKEASDLTLKILDTYTEFAQNALLLPVIPGKKTEKEKFAGADSTYTIESLMHDGQALQCGTSHYFADNFSKPYEIKFQNKEGKLEHAYSTSWGVSTRLIGAIIM
type: DOMAIN
name: ProRS_core_arch_euk
description: Prolyl-tRNA synthetase, catalytic domain
Protein sequence:
MGKLENASWIHDSLMKYLNSTEEYLAYLCGPKRSDLSLPVSVVYALIFVVGVIGNLLVCLVIARHQTLKTPTNYYLFSLAVSDLLVLLLGMPLEVYELWHNYPFLFGPVGCYFKTALFETVCFASILSVTTVSIERYVAIVHPFRAKLESTRRRALRILSLVWSFSVVFSLPNTSIHGIKFQQFPNGSSVPGSATCTVTKPIWVYNFIIQATSFLFYILPMTLISVLYYLMGLRLKRDESLEADKVTVNIHRPSRKSVTKMLFVLVLVFAICWTPFHVDRLFFSFVDEWTESLAAVFNLIHVVSGVFFYLSSAVNPIIYNLLSRRFRAAFRNVVSPSCKWCHPQHRPQGPPAQKVIFLTECHLVELTEDAGPQFPCQSSIHNTQLTTVPCVEEVP

Annotated regions:
phrase: SRRFRAAFRNVVSPSCKWCHPQHRPQGPPAQKVIFLTECHLVELTEDAGPQFPCQSSIHNTQLTT
type: DOMAIN
name: NMU-R2_C
description: Neuromedin-U receptor 2, C-terminal domain

phrase: GNLLVCLVIARHQTLKTPTNYYLFSLAVSDLLVLLLGMPLEVYELWHNYPFLFGPVGCYFKTALFETVCFASILSVTTVSIERYVAIVHPFRAKLESTRRRALRILSLVWSFSVVFSLPNTSIHGIKFQQFPNGSSVPGSATCTVTKPIWVYNFIIQATSFLFYILPMTLISVLYYLMGLRLKRDESLEADKVTVNIHRPSRKSVTKMLFVLVLVFAICWTPFHVDRLFFSFVDEWTESLAAVFNLIHVVSGVFFYLSSAVNPII
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM
Protein sequence:
MSRIGKYPVEVPKGVTVTLNGQDLAVKGPKGELKLTLVDDVTVEQGESGLKVAPREDTQRARAMWGLSRTLVKNIVTGVTDGFTKTLEINGVGYRAAIQGKNLQLNLGFSHDVLYPIPEGIDIKCTKPTEIVITGIDKQKVGQVAAEIRGYRGPEPYKGKGVKYAGEYIFRKEGKKK

Annotated regions:
phrase: PEPYKGKG
type: CONSERVED_SITE
name: Ribosomal_uL6_CS
description: Large ribosomal subunit protein uL6, conserved site

phrase: GVGYRAAIQGKNLQLNLGFSHDVLYPIPEGIDIKCTKPTEIVITGIDKQKVGQVAAEIRGYRGPEPYKGKGVK
type: DOMAIN
name: Ribosomal_uL6_a/b-dom
description: Large ribosomal subunit protein uL6, alpha-beta domain

phrase: VPKGVTVTLNGQDLAVKGPKGELKLTLVDDVTVEQGESGLKVAPREDTQRARAMWGLSRTLVKNIVTGVTD
type: DOMAIN
name: Ribosomal_uL6_a/b-dom
description: Large ribosomal subunit protein uL6, alpha-beta domain
Protein sequence:
MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGNKA

Annotated regions:
phrase: IRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIA
type: DOMAIN
name: SpoU_MeTrfase
description: tRNA/rRNA methyltransferase, SpoU type
Protein sequence:
MNRETIKILKGIKCSRHGNLPERINSLQLNSKEVKAGDLFFALRGEQTDGHKFIPEAVRNNAAAVVAEKLTENLAVPQIIVSDSRAALAQVAANFYGHPSRHLKIIGVTGTNGKTTTVYLLNQIFKSAQKSRGTIGTLGYSINDHYQLLNLTTPDSIQLQQILSEMVVAKVEYVAMEVSAHALSLNRVDTIDFLGGIFTNISQDHLDFYGDMTHYIAAKTRLFKAVSDKGFRLSNADDPHAPDFNQTGSAPLFTYGMKKTADFSWSPGVEYRTSISGTIIYKNRRIPVTSKLSGYFNLSNILAAAGTAICCGLSAEQISDALSKVQYIPGRVQEITRPGAPRVFVDYAHTPDAIVNVLTALRNLVPPEGKLITLFGCGGNRDRSKRPQMAAAAATHSDFVIITTDNPRHEEPEDIICDALAGFPPDCSYKKIVNRKAAIESAIRNAASNDIIAILGKGHENYQEIKGVKYPFSDVEIVKEYINDNR

Annotated regions:
phrase: INSLQLNSKEVKAGDLFFALRGEQTDGHKFIPEAVRNNAAAVVAEKLTENLAVPQIIVSDSRAALAQVAANF
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: GRVQEITRPGAPRVFVDYAHTPDAIVNVLTALRNLVPPEGKLITLFGCGGNRDRSKRPQMAAAAATHSDFVIITTDNPRHEEPEDIICDALAGFPPDCSYKKIVNRKAAIESAIRNAASNDIIAILGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: VTGTNGKTTTVYLLNQIFKSAQKSRGTIGTLGYSINDHYQLLNLTTPDSIQLQQILSEMVVAKVEYVAMEVSAHALSLNRVDTIDFLGGIFTNISQDHLDFYGDMTHYIAAKTRLFKAVSDKGFRLSNADDPHAPDFNQTGSAPLFTYGMKKTADFSWSPGVEYRTSISGTIIYKNRRIPVTSKLSGYFNLSNILAAAG
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central
Protein sequence:
MSTLTNIKDLDQEALTAFLGQHGFPSFRYQQIMDWLYQKWCADFKAMSNLPKDLQELLVGHFRASSLQVENTQQAEDGTIKWLCRLADGETIETVLIPAPERSTVCISTQVGCAVRCAFCASGKQGLVRNLSRSEIVDQVLLACRCQNKKITNVVVMGMGEPMHNLENLLPALELLSAPGVFGLGARHITVSTSGVVAGIRALADCGRAWNLAISLHATSDEQRSRIIPPQYRCPIADILSACEYFRKRTNRMPTLEYALLAGINDRAEDATQLAHLARQFHAKVNLIPCNDGTARYQAPTPAHCRQFLELLLRFGTQATLRLRKGGSIQAACGQLRQQNQPPAQGSHSPS

Annotated regions:
phrase: APERSTVCISTQVGCAVRCAFCASGKQGLVRNLSRSEIVDQVLLACRCQNKKITNVVVMGMGEPMHNLENLLPALELLSAPGVFGLGARHITVSTSGVVAGIRALADCGRAWNLAISLHATSDEQRSRIIPPQYRCPIADILSACEYFRKRTNRMPTLEYALLAGINDRAEDATQLAHLARQFHAKVNLIPCNDGTARYQAPTPAHCRQFLELLLRFGTQATLRLRKGG
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TNIKDLDQEALTAFLGQHGFPSFRYQQIMDWLYQKWCADFKAMSNLPKDLQEL
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: TLTNIKDLDQEALTAFLGQHGFPSFRYQQIMDWLYQKWCADFKAMSNLPKDLQELLVGHFRASSLQVENTQQAEDGTIKWLCRLADGETIETVLIPAPERSTVCISTQVGCAVRCAFCASGKQGLVRNLSRSEIVDQVLLACRCQNKKITNVVVMGMGEPMHNLENLLPALELLSAPGVFGLGARHITVSTSGVVAGIRALADCGRAWNLAISLHATSDEQRSRIIPPQYRCPIADILSACEYFRKRTNRMPTLEYALLAGINDRAEDATQLAHLARQFHAKVNLIPCNDGTARYQAPTPAHCRQFLELLLRFGTQATLRLRKGGSIQAACGQLRQQNQ
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: ISTQVGCAVRCAFCASGKQGLVRNLSRSEIVDQVLLACRCQNKKITNVVVMGMGEPMHNLENLLPALELLSAPGVFGLGARHITVSTSGVVAGIRALADCGRAWNLAISLHATSDEQRSRIIPPQYRCPIADILSACEYFRKRTNRMPTLEYALLAGINDRAED
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MAHKKGQGSTRNGRDSHSKRLGIKEFSGEVVKAGHILLRQRGTKFKPGKNVGMGRDFTLYSLVHGQVEWDGSRRLVHVKPFNTA

Annotated regions:
phrase: GHILLRQRGTKFKP
type: CONSERVED_SITE
name: Ribosomal_bL27_CS
description: Large ribosomal subunit protein bL27, conserved site
Protein sequence:
MTQNHDPYSDAQALVGLTLGKATDYQAEYDASLLQGVPRSLNRNAIALTGTLPFHGADIWTGYELSWLNAKGKPMVAIAEFHLSYESLNLIESKSFKLYLNSFNQTKFDSIDSLQKTLVADLSQCAQGDISVKIIEPKSFGIQRIIELPGTCIDDLDIEVSDYSFNPDYLENSTDDKQTVAETLNSNLLKSNCLITSQPDWGSVMIRYQGPKIDREKLLRYLISFRQHNEFHEQCVERIFVDLKRFCHCTKLTVYARYTRRGGLDINPYRSDFEQPGESHRLARQ

Annotated regions:
phrase: YQAEYDASLLQGVPRSLNRNAIALTGTLPFHGADIWTGYELSWLNAKGKPMVAIAEFHLSYESLNLIESKSFKLYLNSFNQTKFDSIDSLQKTLVADLSQCAQGDISVK
type: DOMAIN
name: QueF_N
description: NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal
Protein sequence:
MNINLTMFGQLIMFTMFTWFCMKFVWPPIVMTMEERKKRIESGLLAAERGRSEQEEMQAKAQEMINQSKDQAAEIIANATRQASNMVEDAKDVALKEAGKVKAQAQAQLEQDTIQTRNELKNQMSDLIMQGVSVVLAKEVDVKVHQKMLGKLSQSLS

Annotated regions:
Protein sequence:
MELRAFCVILLITVLAVSSQAAKNKKEKGKKGASDCTEWTWGSCIPNSKDCGAGTREGTCKEETRKLKCKIPCNWKKAFGADCKYKFENWGECNATTGQKVRSGTLKKALYNADCQQTVEATKPCSLKTKSKSKGKKGKGKE

Annotated regions:
phrase: KNKKEKGKKGASDCTEWTWGSCIPNSKDCGAGTREGTCKEETRKLKCKIPCNWKKA
type: DOMAIN
name: PTN/MK_N_dom
description: Pleiotrophin/Midkine, N-terminal domain

phrase: SDCTEWTWGSCIPNSKDCGAGTRE
type: CONSERVED_SITE
name: PTN_MK_heparin-bd_GF_CS
description: Pleiotrophin/Midkine heparin-binding growth factor, conserved site

phrase: CKIPCNWKKAFGADCKYKFENWGE
type: CONSERVED_SITE
name: PTN_MK_heparin-bd_GF_CS
description: Pleiotrophin/Midkine heparin-binding growth factor, conserved site

phrase: GADCKYKFENWGECNATTGQKVRSGTLKKALYNADCQQTVEATKPCSLKTKSKSKGKKGKG
type: DOMAIN
name: PTN/MK_C_dom
description: Pleiotrophin/Midkine, C-terminal domain
Protein sequence:
MNKTTEYIDAMPIAASEKAALPKTDIRAVHQALDAEHRTWAREDDSPQGSVKARLEQAWPDSLADGQLIKDDEGRDQLKAMPEAKRSSMFPDPWRTNPVGRFWDRLRGRDVTPRYLARLTKEEQESEQKWRTVGTIRRYILLILTLAQTVVATWYMKTILPYQGWALINPMDMVGQDLWVSFMQLLPYMLQTGILILFAVLFCWVSAGFWTALMGFLQLLIGRDKYSISASTVGDEPLNPEHRTALIMPICNEDVNRVFAGLRATWESVKATGNAKHFDVYILSDSYNPDICVAEQKAWMELIAEVGGEGQIFYRRRRRRVKRKSGNIDDFCRRWGSQYSYMVVLDADSVMTGDCLCGLVRLMEANPNAGIIQSSPKASGMDTLYARCQQFATRVYGPLFTAGLHFWQLGESHYWGHNAIIRVKPFIEHCALAPLPGEGSFAGSILSHDFVEAALMRRAGWGVWIAYDLPGSYEELPPNLLDELKRDRRWCHGNLMNFRLFLVKGMHPVHRAVFLTGVMSYLSAPLWFMFLALSTALQVVHALTEPQYFLQPRQLFPVWPQWRPELAIALFASTMVLLFLPKLLSILLIWCKGTKEYGGFWRVTLSLLLEVLFSVLLAPVRMLFHTVFVVSAFLGWEVVWNSPQRDDDSTSWGEAFKRHGSQLLLGLVWAVGMAWLDLRFLFWLAPIVFSLILSPFVSVISSRATVGLRTKRWKLFLIPEEYSPPQVLVDTDRFLEMNRQRSLDDGFMHAVFNPSFNALATAMATARHRASKVLEIARDRHVEQALNETPEKLNRDRRLVLLSDPVTMARLHFRVWNSPERYSSWVSYYEGIKLNPLALRKPDAASQ

Annotated regions:
phrase: LIMPICNEDVNRVFAGLRATWESVKATGNAKHFDVYILSDSYNPDICVAEQKAWMELIAEVGGEGQIFYRRRRRRVKRKSGNIDDFCRRWGSQYSYMVVLDADSVMTGDCLCGLVRLMEANPNAGIIQSSPKASGMDTLYARCQQFATRVYGPLFTAGLHFWQLGESHYWGHNAIIRVKPFI
type: DOMAIN
name: Glyco_trans_2-like
description: Glycosyltransferase 2-like
Protein sequence:
MTMMDMNFKYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQFLNQIKEDIQSIEKYPYEHHHFQSDRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQHFTMFETDAELFGYCYGVAGTVGEVLTPILSDHETHQTYDVARRLGESLQLINILRDVGEDFENERIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFRDVMDQIKVFSIEAQPIIELAARIYIEILDEVRQASYTLHERVFVYKRKKAKLFHEINSKYHRI

Annotated regions:
phrase: KYCHKIMKKHSKSFSYAFDLLPEDQRKAVWAIYAVCRKIDDSIDVYGDIQFLNQIKEDIQSIEKYPYEHHHFQSDRRIMMALQHVAQHKNIAFQSFYNLIDTVYKDQHFTMFETDAELFGYCYGVAGTVGEVLTPILSDHETHQTYDVARRLGESLQLINILRDVGEDFENERIYFSKQRLKQYEVDIAEVYQNGVNNHYIDLWEYYAAIAEKDFRDVMDQIKVFSIEAQPIIELAARIYIEILDEVRQASYTLHERVFVYKRK
type: DOMAIN
name: Trans_IPPS_HH
description: Trans-isoprenyl diphosphate synthases, head-to-head

phrase: YCYGVAGTVGEVLTP
type: CONSERVED_SITE
name: Squalene/phytoene_synthase_CS
description: Squalene/phytoene synthase, conserved site
Protein sequence:
MSILSGKNILLGITGGIAAYKTASLVRLFVKSGANVKVVMTPASKEFITPLTLSTLSKNPVYSSFTNEYEDSEVWNNHVDLGLWADLLVVAPATANTLSKMANGVCDNFLLATYLSAKCPVYYAPAMDLDMYKHPTTAHSFEQLNSFGNIMIPATSGELASGLVGEGRMAEPEDIIAFIEQDVLGKLPLRNKKVLITAGPTYEAIDPVRFIGNHSSGKMGFEIAKAAANLGAEVILVTGPTSQKVSHSLIDVIQVVSAQDMYDAVHEYFESTDIAILSAAVADYKPKNVELQKIKKNTASLTLELEKTKDILASLGEIKKQQYLVGFALETQDELENAKGKLKRKNLNLIVLNSLNDKGAGFKGDTNKVTFIDEEQNITAFDLKTKAEVASDLLSKIISHI

Annotated regions:
phrase: KNILLGITGGIAAYKTASLVRLFVKSGANVKVVMTPASKEFITPLTLSTLSKNPVYSSFTNEYEDSEVWNNHVDLGLWADLLVVAPATANTLSKMANGVCDNFLLATYLSAKCPVYYAPAMDLDMYKHPTTAHSFEQLNSFGNIMIPATSGELASGLVGEGRMAEPEDIIAFIE
type: DOMAIN
name: Flavoprotein
description: Flavoprotein

phrase: LRNKKVLITAGPTYEAIDPVRFIGNHSSGKMGFEIAKAAANLGAEVILVTGPTSQKVSHSLIDVIQVVSAQDMYDAVHEYFESTDIAILSAAVADYKPKNVELQKIKKNTASLTLELEKTKDILASLGEIKKQQYLVGFALETQDELENAKGKLKRKNLNLIVLNSLNDKGAGFKGDTNKVTF
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal
Protein sequence:
MSQTKPRDVQVLPIGTNTTVLRSRSWTRLRFEIEYALAKGTTANSYLIQGDKLALIDPPGETFTQIYLDALQKRLDVTEINYVILGHINPNRAATLKALLEIAPQITFVCSNPGAINLRGVLENPDLPMLIMRGEETLDLGKGHNLQFIPTPNPRYADELCTYDPQTEILYTDKLFGAHICGDQVFDEGWATINEDRRYYYDCLMAPHARQVETALDKLADFPTRLYATGHGPLVRYGLIELTHAYREWSQQQTSADLTVALIYASAYGNTATLAQAIARGITKAGVAVESINCEFADPEEIRAAVEKSAGFVMGSPTLGGHAPTPVQTALGIVLSTATNNKLAGVFGSFGWSGEAVDLIESKLKDAGYRFGFDSIRVKFKPNEVTLQMCEEAGTDFAQALKKARKVRTQSVPATNVEQAVGRIVGSLCVVTAKQGEISSAMLASWVAQASFNPPGLTIAVAKDRAVETLTHTGNKFVLNVLKEGNHLGLMKHFLKPFGPAQDRFADVATAEAENGSPVLQDALAYLECSVQNRMESGDHWLVYATVENGKVLNQDGVTAVHHRKSGNHY

Annotated regions:
phrase: LIYASAYGNTATLAQAIARGITKAGVAVESINCEFADPEEIRAAVEKSAGFVMGSPTLGGHAPTPVQTALGIVLSTATNNKLAGVFGSFGWSGEAVDLIESKLKDAGYRFGFDSIRVKFKPNEVTLQMCEEA
type: DOMAIN
name: Flavodoxin/NO_synth
description: Flavodoxin/nitric oxide synthase

phrase: TANSYLIQGDKLALIDPPGETFTQIYLDALQKRLDVTEINYVILGHINPNRAATLKALLEIAPQITFVCSNPGAINLRGVLENPDLPMLIMRGEETLDLGKGHNLQFIPTPNPRYADELCTYDPQTEILYTDKLFGAHICGDQVFDEGWATINEDRRYYYDCLMAPHARQVETALDKLADFPTRLYATG
type: DOMAIN
name: Metallo-B-lactamas
description: Metallo-beta-lactamase

phrase: GRIVGSLCVVTAKQGEISSAMLASWVAQASFNPPGLTIAVAKDRAVETLTHTGNKFVLNVLKEGNHLGLMKHFLKPFGPAQDRFADVATAEAENGSPVLQDALAYLECSVQNRMESGDHWLVYATVENGKVLNQDGVTAVHH
type: DOMAIN
name: Flavin_Rdtase-like_dom
description: Flavin reductase like domain

phrase: LIYASAYGNTATLAQA
type: CONSERVED_SITE
name: Flavodoxin_CS
description: Flavodoxin, conserved site

phrase: ANSYLIQGDKLALIDPPGETFTQIYLDALQKRLDVTEINYVILGHINPNRAATLKALLEIAPQITFVCSNPGAINLRGVLENPDLPMLIMRGEETLDLGKGHNLQFIPTPNPRYADELCTYDPQTEILYTDKLFGAHICGDQVFDEGWATINEDRRYYYDCLMAPHARQVETALDKLADFPTRLYATGH
type: DOMAIN
name: ODP_dom
description: ODP domain

phrase: VALIYASAYGNTATLAQAIARGITKAGVAVESINCEFADPEEIRAAVEKSAGFVMGSPTLGGHAPTPVQTALGIVLSTATNNKLAGVFGSFGWSGEAVDLIESKLKDAGYRFGFDSIRVKFKPNEVTLQMCEEAGTDF
type: DOMAIN
name: Flavodoxin/NO_synth
description: Flavodoxin/nitric oxide synthase

phrase: VGRIVGSLCVVTAKQGEISSAMLASWVAQASFNPPGLTIAVAKDRAVETLTHTGNKFVLNVLKEGNHLGLMKHFLKPFGPAQDRFADVATAEAENGSPVLQDALAYLECSVQNRMESGDHWLVYATVENGKVLNQDGVTAVHHRKSGNH
type: DOMAIN
name: Flavin_Rdtase-like_dom
description: Flavin reductase like domain
Protein sequence:
MARSDEDSWDLASSVGATATMVAAARAVASRGPEALIDDPYADALVRAVGVEYFVKLLDGEITLEADNAAMLAVMTDVMAVRTRFFDDFFLSSGLPQAVILASGLDARAYRLPWPSGSVVYEIDQPEVIEFKTRTLADLGASPAAELRTVAIDLRDDWPRALRDRGFDPTAPTAWIAEGLLIYLPPDAQDRLFDNITALSAPGSRLATEFHPDAGARIGASSQRMAEEWRRHGLDLDMADLFYDGERNPVVDYLRERGWEVEARSRPDMFAHYGRPFPTGEAVEALRQSLAVTATRR

Annotated regions:
Protein sequence:
MANLKALFLRMKSVKSIQKTTKVMQMISAAKLRQVQQRLNNARMHMLELSKIIDTNVVTKNNECTGPHNKKDILLVIMSSDRGLCGNFNNMIVKFAKSYIEELESCGKNVKLLFFGKVAYNMMCSQYSSKILDVFSNIQSITDFLSFKLFLYGSGVDFNQFIGVMVLFNKFYTTILQKPTVEQLMPCNIDISVSLKEYYKYEPAYLNVLSTMSLSYILNLMYIAFLENCASEHSSRVIAMESANNNTKEMLSKLVLQYNRSRQAAITTDLIEVISGFESLGNQ

Annotated regions:
Protein sequence:
MTIWVDADACPNVIKEILYRAAERMQLPLILVANQSLRVPPSRFIRTLRVAAGFDVADNEIVRQCEPGDLVITADIPLASEVLAKGAAALNPRGERYSEATIRERLTMRDFMDTLRASGIQTGGPDALSPRDRQHFAAELDKWWLEAKRKKESM

Annotated regions:
Protein sequence:
MMAVTVSGNTGQSTAERLQCEFFLVKKKRQCGMTRRAGSQFCSEHSTDSDRVPCPLDPSHTVCLSKMRVHMRKCNKFRHDVSYQAKQREIPWFKEGLNSISNGKSDSKPADETLVKSVSLIQKIFQNEFGDEPPLPLIEKQNELLERTERYKTLVNRKHARQQSSLIQHLKESKLWPSLESCAVNKTLEYIELGCGRAEFSRYVNIATNLDQKEHSHEKPEYKAVAPSFTLIDRASQRLRFDNKFSSDIGTEVQIRREKIDIKDLRLDAVLHDASQYVAISKHLCGVATDLSLRCLLNSDKCKANLRGILIAMCCRHVCQSSEYVNQEYIKGLLKRQTDGSMAYSEFFQCLKKFCSYCTCGLRPDMDPNSGSEDHITKLTHNERQRIGHMARRIIDEGRAQFLQSKGFETVLFKYTDSAVTLEDTALLALRKHD

Annotated regions:
phrase: RVPCPLDPSHTVCLSKMRVHMRKCNKF
type: DOMAIN
name: TRM13/UPF0224_CHHC_Znf_dom
description: TRM13/UPF0224 family, U11-48K-like CHHC zinc finger domain

phrase: LQCEFFLVKKKRQCGMTRRAGSQFCSE
type: DOMAIN
name: Znf_CCCH-type_TRM13
description: Zinc finger, CCCH-type, TRM13

phrase: RVPCPLDPSHTVCLSKMRVHMRKC
type: DOMAIN
name: TRM13/UPF0224_CHHC_Znf_dom
description: TRM13/UPF0224 family, U11-48K-like CHHC zinc finger domain

phrase: QQSSLIQHLKESKLWPSLESCAVNKTLEYIELGCGRAEFSRYVNIATNLDQKEHSHEKPEYKAVAPSFTLIDRASQRLRFDNKFSSDIGTEVQIRREKIDIKDLRLDAVLHDASQYVAISKHLCGVATDLSLRCLLNSDKCKANLRGILIAMCCRHVCQSSEYVNQEYIKGLLKRQTDGSMAYSEFFQCLKKFCSYCTCGLRPDMDPNSGSEDHITKLTHNERQRIGHMARRIIDEGRAQFLQSKGFETVLFKYTDSAVTLEDTALL
type: DOMAIN
name: Methyltransferase_TRM13
description: Methyltransferase TRM13
Protein sequence:
MKIFSESHKTVFVVDHCPYMAESCRQHVEFDMLVKNRTQGIIPLAPISKSLWTCSVESSMEYCRIMYDIFPFKKLVNFIVSDSGAHVLNSWTQEDQNLQELMAALAAVGPPNPRADPECCSILHGLVAAVETLCKITEYQHEARTLLMENAERVGNRGRIICITNAKSDSHVRMLEDCVQETIHEHNKLAANSDHLMQIQKCELVLIHTYPVGEDSLVSDRSKKELSPVLTSEVHSVRAGRHLATKLNILVQQHFDLASTTITNIPMKEEQHANTSANYDVELLHHKDAHVDFLKSGDSHLGGGSREGSFKETITLKWCTPRTNNIELHYCTGAYRISPVDVNSRPSSCLTNFLLNGRSVLLEQPRKSGSKVISHMLSSHGGEIFLHVLSSSRSILEDPPSISEGCGGRVTDYRITDFGEFMRENRLTPFLDPRYKIDGSLEVPLERAKDQLEKHTRYWPMIISQTTIFNMQAVVPLASVIVKESLTEEDVLNCQKTIYNLVDMERKNDPLPISTVGTRGKGPKRDEQYRIMWNELETLVRAHINNSEKHQRVLECLMACRSKPPEEEERKKRGRKREDKEDKSEKAVKDYEQEKSWQDSERLKGILERGKEELAEAEIIKDSPDSPEPPNKKPLVEMDETPQVEKSKGPVSLLSLWSNRINTANSRKHQEFAGRLNSVNNRAELYQHLKEENGMETTENGKASRQ

Annotated regions:
Protein sequence:
MAVTFYDLSSEAGLEKLDEYLLSRSYISGYQASKDDLAVHAALAKPPSSKYVNVSRWYNHVEALLRISGVSAEGCGVTVEGSSVATPPVADTKASAAEDDDDDDVDLFGEETEEEKKASEERAAAVKASGKKKESGKSSVLLDVKPWDDETDMTKLEEAVRSIKMDGLLWGASKLVAVGYGIKKLQIMLTIVDDLVSVDDLVEDYLTAEPANEYIQSCDIVAFNKI

Annotated regions:
phrase: IQSCDIVAFNK
type: CONSERVED_SITE
name: Transl_elong_EF1B_B/D_CS
description: Translation elongation factor EF1B, beta/delta chains, conserved site

phrase: SVLLDVKPWDDETDMTKLEEAVRSIKMDGLLWGASKLVAVGYGIKKLQIMLTIVDDLVSVDDLVEDYLTAEPANEYIQSCDIVAFNK
type: DOMAIN
name: EF1B_bsu/dsu_GNE
description: Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain

phrase: DDDDVDLF
type: CONSERVED_SITE
name: Transl_elong_EF1B_B/D_CS
description: Translation elongation factor EF1B, beta/delta chains, conserved site

phrase: SGKSSVLLDVKPWDDETDMTKLEEAVRSIKMDGLLWGASKLVAVGYGIKKLQIMLTIVDDLVSVDDLVEDYLTAEPANEYIQSCDIVAFNK
type: DOMAIN
name: EF1B_bsu/dsu_GNE
description: Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain

phrase: KSSVLLDVKPWDDETDMTKLEEAVRSIKMDGLLWGASKLVAVGYGIKKLQIMLTIVDDLVSVDDLVEDYLTAEPANEYIQSCDIVAFNK
type: DOMAIN
name: EF1B_bsu/dsu_GNE
description: Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange domain
Protein sequence:
MSNLVPMVVEQTSKGERSYDIFSRLLKDRIIMLSGEVNDVTANLVVAQLLFLESEDPDKDIHLYINSPGGSITSGMAIYDTMQYIKPDVSTICIGMAASMGAFLLSSGAKGKRFALPNAEIMIHQPLGGFQGQATDIDIHAKRILKIKDKLNQILSENTNQPLEKIKVDVERDYFMEASEAVEYGLIDKVIERK

Annotated regions:
phrase: TICIGMAASMG
type: ACTIVE_SITE
name: ClpP_Ser_AS
description: ClpP, Ser active site

phrase: RFALPNAEIMIHQ
type: ACTIVE_SITE
name: ClpP_His_AS
description: ClpP, histidine active site