nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MAAGKEIRGKIKSVENTKKITKAMEMVAASKMRKAQDRMRAARPYAEKVRNIAAHLGEANPEYVHPFMKANDAKAAGIIVVTTDKGLCGGMNTNVLRAVTTKLRELQSTGVDVQSVAIGNKGLGFLNRVGAKVVAHATGLGDTPHLDKLIGPVKVLLDAYAEGKINAVYLSYTKFINTMKQESVVEQLLPLSSEQMQAQKTGHGWDYIYEPDAQSVIDELLVRYVESLIYQAVAENMASEQSARMVAMKAATDNAGNVINELKLVYNKTRQAAITKELSEIVAGAAAV

Annotated regions:
phrase: ITKELSEIVAGAA
type: CONSERVED_SITE
name: ATP_synth_F1_gsu_CS
description: ATP synthase, F1 complex, gamma subunit conserved site
Protein sequence:
MFNLRTCASKLRPLTASQTIRSLKHNRPAAPRTFQQFRCLSTPVAAEPFLSGTNSNYVEEMYYAWLENPKSVHKSWDIFFRNANAGASPGAAYQSPPSLGSSLSTLTQAQSLLHSQPNVDKLVEDHLAVQSLIRAYQIRGHHVAQLDPLGILDADLDSCVPADIVTSSDKLGFYGLQESDLDKVFHLPTTTFIGGNEMALPLREIIRRLENAYCQHIGVEFMFINDLEQCQWIRQKFEAPGIMQFNNEEKRTLLARLVRSTRFEEFLHRKWSSEKRFGLEGCEVLIPALKTIIDKSSGNGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEATDEGSGDVKYHLGMYHRRINRVTDRNITLSLVANPSHLEAADPVVQGKTKAEQFYCGDTEGKKVMAILLHGDAAFAGQGIVYETFHLSDLPSHTTHGTVHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVMYVCNVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEPMFTQPLMYKQIRKQKAVLQKYAETLISQGVVNQLEYEEEISKYDKICEEAFARSKDEKILHIKHWLDSPWPGFFTLDGQPRSMTCPSTGLTEEDLTHIGNVASSVPVEDFMIHGGLSRILKGRGEMVKNRTVDWALAEYMALGSLLKEGIHIRLSGQDVERGTFSHRHHVLHDQNVDKRTCIPMNHLWPNQAPYTVCNSSLSEYGVLGFELGFAMASPNALVLWEAQFGDFHNTAQCIIDQFVCPGQAKWVRQNGIVLLLPHGMEGMGPEHSSARPERFLQMCNDDPDVWPKASEDFAVGQLYDCNWIVVNCSTPANFFHVIRRQILLPFRKPLIVFTPKSLLRHPEARSSFDDMLPSTHFQRIIPEAGPASQNPEGVKRLIFCTGKVYYELTKERSGRDMEGDVAIARVEQLSPFPFDLVEKEVQKYPNADLVWCQEEHKNQGYYDYVKPRLRTTIHRTKPVWYAGRDPAAAPATGNKKTHLTELRRFLDTAFNLDAFKGHF

Annotated regions:
phrase: RSSFDDMLPSTHFQRIIPEAGPASQNPEGVKRLIFCTGKVYYELTKERSGRDMEGDVAIARVEQLSPFPFDLVEKEVQKYPNADLVWCQEEHKNQGYYDYVKPRLRTTIHRTKPVWYAGRDPAAAPATGNKKTHLTELRRFLDTA
type: DOMAIN
name: ODO-1/KGD_C
description: 2-oxoglutarate dehydrogenase E1 component/KDG, C-terminal

phrase: TVDWALAEYMALGSLLKEGIHIRLSGQDVERGTFSHRHHVLHDQNVDKRTCIPMNHLWPNQAPYTVCNSSLSEYGVLGFELGFAMASPNALVLWEAQFGDFHNTAQCIIDQFVCPGQAKWVRQNGIVLLLPHGMEGMGPEHSSARPERFLQMCNDDPDVWPKASEDFAVGQLYDCNWIVVNCSTPANFFHVIRRQILLPFRKPLIVFTPKSLL
type: DOMAIN
name: Transketolase-like_Pyr-bd
description: Transketolase-like, pyrimidine-binding domain

phrase: VDWALAEYMALGSLLKEGIHIRLSGQDVERGTFSHRHHVLHDQNVDKRTCIPMNHLWPNQAPYTVCNSSLSEYGVLGFELGFAMASPNALVLWEAQFGDFHNTAQCIIDQFVCPGQAKWVRQNGIVLLLPHGMEGMGPEHSSARPERFLQMCNDDPDVWPKASEDFAVGQLYDCNWIVVNCSTPANFFHVIRRQILLPFRKPLIVFTPKSLLR
type: DOMAIN
name: Transketolase-like_Pyr-bd
description: Transketolase-like, pyrimidine-binding domain

phrase: PFLSGTNSNYVEEMYYAWLENPKSVHKSWDIFFRNANA
type: DOMAIN
name: 2-oxogl_dehyd_N
description: 2-oxoglutarate dehydrogenase E1 component, N-terminal domain

phrase: RLVRSTRFEEFLHRKWSSEKRFGLEGCEVLIPALKTIIDKSSGNGVDYVIMGMPHRGRLNVLANVIRKELEQIFCQFDSKLEATDEGSGDVKYHLGMYHRRINRVTDRNITLSLVANPSHLEAADPVVQGKTKAEQFYCGDTEGKKVMAILLHGDAAFAGQGIVYETFHLSDLPSHTTHGTVHVVVNNQIGFTTDPRMARSSPYPTDVARVVNAPIFHVNADDPEAVMYVCNVAAEWRSTFHKDVVVDLVCYRRNGHNEMDEPMFTQPLMYKQIRKQKAVLQKYAETLISQGVVNQLEYEEEISKYDKICEEAFARSKDEKILH
type: DOMAIN
name: DH_E1
description: Dehydrogenase, E1 component
Protein sequence:
MLRLKNDRFIRALLRQPVDRTPVWIMRQAGRYLPEYRQLREKVPNFMAFCKTPELACEATLQPLRRFPLDAAIIFSDILTIPDAMGVDLHIAPTVGPVIRNPVRSAQDVNRLQMPPVEEALSYLFDAIRLTVKALDHRVPLIGFAGSPWTLACYMTEGQSSKTFLTARAMLYQQPDVFHTLLQKLTTLTIAYLNAQIKAGADVVMLFDTWGGLLTPSLYRQFSLDYLSQIAAEVVRQKNGRKIPLIFFTKNGGQWLESIANSGCDAVGLDWTTDIGQARRRVGDRVALQGNLDPAILLSNPESISTAAVDILKSYGQGSGHVFNLGHGIDPSTPIENVAALVETVQNFSIKNEEPINSYYR

Annotated regions:
phrase: IGFAGSPWTLACYMTE
type: DOMAIN
name: Uroporphyrinogen_deCOase
description: Uroporphyrinogen decarboxylase (URO-D)

phrase: KNDRFIRALLRQPVDRTPVWIMRQAGRYLPEYRQLREKVPNFMAFCKTPELACEATLQPLRRFPLDAAIIFSDILTIPDAMGVDLHIAPTVGPVIRNPVRSAQDVNRLQMPPVEEALSYLFDAIRLTVKALDHRVPLIGFAGSPWTLACYMTEGQSSKTFLTARAMLYQQPDVFHTLLQKLTTLTIAYLNAQIKAGADVVMLFDTWGGLLTPSLYRQFSLDYLSQIAAEVVRQKNGRKIPLIFFTKNGGQWLESIANSGCDAVGLDWTTDIGQARRRVGDRVALQGNLDPAILLSNPESISTAAVDILKSYGQGSGHVFNLGHGIDPSTPIENVAALVETVQ
type: DOMAIN
name: Uroporphyrinogen_deCOase
description: Uroporphyrinogen decarboxylase (URO-D)

phrase: PVWIMRQAG
type: DOMAIN
name: Uroporphyrinogen_deCOase
description: Uroporphyrinogen decarboxylase (URO-D)
Protein sequence:
METVRIATRKSPLALWQSEHVADRLRQAHPGLHVELVPMSTRGDEVLDRSLAAIGGKGLFLKELELAMLRGEADCAVHSLKDVPMELDEPFALPAMLTRHDPADGFVSNLYASLDALPIGARVGTSSLRRQAQLRALRPDLQLLDLRGNVNTRLAKLDNGGYDAIVLAVAGLERLGLGERIVARLQPPQWLPAPAQGAVAVECDGSNARLMALFAGLDDAATRACVEAERAMNRALHGSCHVPVAAIAQWQGQDLHLQGLVGSASDGRAVRAEAVGPASDPEVLGQRVAKMLLDAGAGELLNV

Annotated regions:
phrase: ACVEAERAMNRALHGSCHVPVAAIAQWQGQDLHLQGLVGSASDGRAVRAEAVGPASDPEVLGQRVAKML
type: DOMAIN
name: Porphobilinogen_deaminase_C
description: Porphobilinogen deaminase, C-terminal

phrase: ERAMNRALHGSCHVPV
type: BINDING_SITE
name: Porphobilin_deaminase_cofac_BS
description: Porphobilinogen deaminase, dipyrromethane cofactor binding site

phrase: VRIATRKSPLALWQSEHVADRLRQAHPGLHVELVPMSTRGDEVLDRSLAAIGGKGLFLKELELAMLRGEADCAVHSLKDVPMELDEPFALPAMLTRHDPADGFVSNLYASLDALPIGARVGTSSLRRQAQLRALRPDLQLLDLRGNVNTRLAKLDNGGYDAIVLAVAGLERLGLGERIVARLQPPQWLPAPAQGAVAVECDGSNAR
type: DOMAIN
name: Porphobilin_deaminase_N
description: Porphobilinogen deaminase, N-terminal
Protein sequence:
MSIKSDKWIRRMAEQHGMIEPFEPGQVREADGRRIVSYGTSSYGYDIRCADEFKIFTNINSTIVDPKNFDEKSFVDFKGDVCIIPPNSFALARTMEYFRIPRTVLTVCLGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGCAQVLFFESDEPCETSYRDRGGKYQGQHGVTLPKT

Annotated regions:
phrase: GYDIRCADEFKIFTNINSTIVDPKNFDEKSFVDFKGDVCIIPPNSFALARTMEYFRIPRTVLTVCLGKSTYARCGIIVNVTPFEPEWEGYVTLEFSNTTPLPAKIYAGEGCAQVL
type: DOMAIN
name: dUTPase_trimeric
description: dUTPase, trimeric
Protein sequence:
MRLRRLALFPGVALLLAAARLAAASDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQAGPASVPLRTEEEFKKFISDKDASIVGFFDDSFSEAHSEFLKAASNLRDNYRFAHTNVESLVNEYDDNGEGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQENIFGICPHMTEDNKDLIQGKDLLIAYYDVDYEKNAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTAGEIPVVAIRTAKGEKFVMQEEFSRDGKALERFLQDYFDGNLKRYLKSEPIPESNDGPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATANDVPSPYEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQREATNPPVIQEEKPKKKKKAQEDL

Annotated regions:
phrase: LVEFFAPWCGHCKRLAPE
type: CONSERVED_SITE
name: Thioredoxin_CS
description: Thioredoxin, conserved site

phrase: SRDGKALERFLQDYFDGNLKRYLKSEPIPESNDGPVKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATANDVPSPYEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQREA
type: DOMAIN
name: Thioredoxin_domain
description: Thioredoxin domain

phrase: ARLAAASDVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKKQA
type: DOMAIN
name: Thioredoxin_domain
description: Thioredoxin domain

phrase: LIEFYAPWCGHCKNLEPK
type: CONSERVED_SITE
name: Thioredoxin_CS
description: Thioredoxin, conserved site

phrase: LTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLKK
type: DOMAIN
name: PDI_thioredoxin-like_dom
description: Protein disulfide-isomerase, thioredoxin-like domain

phrase: VVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATANDVPSPYEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYLQ
type: DOMAIN
name: PDI_thioredoxin-like_dom
description: Protein disulfide-isomerase, thioredoxin-like domain

phrase: ASVPLRTEEEFKKFISDKDASIVGFFDDSFSEAHSEFLKAASNLRDNYRFAHTNVESLVNEYDDNGEGIILFRPSHLTNKFEDKTVAYTEQKMTSGKIKKFIQEN
type: DOMAIN
name: PDIA3_PDI_b
description: Protein disulfide-isomerase A3, first redox inactive TRX-like domain b

phrase: VLELTDDNFESRISDTGSAGLMLVEFFAPWCGHCKRLAPEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYDGPRTADGIVSHLK
type: DOMAIN
name: Thioredoxin_domain
description: Thioredoxin domain

phrase: VKVVVAENFDEIVNNENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSKDPNIVIAKMDATANDVPSPYEVRGFPTIYFSPANKKLNPKKYEGGRELSDFISYL
type: DOMAIN
name: Thioredoxin_domain
description: Thioredoxin domain
Protein sequence:
MKQRIKTRHMILGVMCLMYFIAYIDRVNISVAAPLIREEMGLTTSQLGLVFSAFAYPYAAMQILGGWMADKFGPKKVLIVLSLIWGVATVLTGFAGSVLILVVLRFVLGIGEGGAFPTATRAFTYWMPVAERGFAQGITHSFARLGGAITPPVVLVIVAAAGWREAFIVLGAVSLGWTLLYAFFFKDSPDKHSRVTAQELQEIGYRHGDSRQAAKAATPWRRLFRRMWLVTFVDFCYGWSLWVYLTWLPSYLKEARGFDLKQLALFTALPLMAGVVGDTLGGVLSDRIYKRTGNLRLARGAVLFVGLAGSLMFIAPMTFTADAVNAVILLSLSFFFLELTNAVLWSLPLDIAGKYAGTAGGMMNTGFGVAGMVSPVVFGYLIERTGSYDLPFMISGALLGVGALASLFINPLLTVDSPDEKAGEVRHALP

Annotated regions:
phrase: ILGVMCLMYFIAYIDRVNISVAAPLIREEMGLTTSQLGLVFSAFAYPYAAMQILGGWMADKFGPKKVLIVLSLIWGVATVLTGFAGSVLILVVLRFVLGIGEGGAFPTATRAFTYWMPVAERGFAQGITHSFARLGGAITPPVVLVIVAAAGWREAFIVLGAVSLGWTLLYAFFFKDSPDKHSRVTAQELQEIGYRHGDSRQAAKAATPWRRLFRRMWLVTFVDFCYGWSLWVYLTWLPSYLKEARGFDLKQLALFTALPLMAGVVGDTLGGVLSDRIYKRTGNLRLARGAVLFVGLAGSLMFIAPMTFTADAVNAVILLSLSFFFLELTNAVLWSLPLDIAGKYAGTAGGMMNTGFGVAGMVSPVVFGYLIERTGSYDLPFMISGALLGVGALASLFINPLL
type: DOMAIN
name: MFS_dom
description: Major facilitator superfamily domain
Protein sequence:
MRPSNPRPPVTGPDSGPEAPFPIRLSGPVIKGFGRGSKELGIPTANIPVDGLEEVLPKELGVGVYYGVVALDPATAPAPSSSDSTSGDAAPILPAVLSIGYNPYYKNKTRSIEIHIMPSLTLPSPTAPSEEKEKVKFHKLPDFYGTKLNLLMLGYIRPEYDYVSMEALVEDIRIDCEVARASLLRPAYRVYLDGNEDETVSAQRDWLRSF

Annotated regions:
phrase: EAPFPIRLSGPVIKGFGRGSKELGIPTANIPVDGLEEVLPKELGVGVYYGVVALDPATAPAPSSSDSTSGDAAPILPAVLSIGYNPYYKNKTRSIEIHIMPSLTLPSPTAPSEEKEKVKFHKLPDFYGTKLNLLMLGYIRPEYDYVSMEALVEDIRIDCEVARASL
type: DOMAIN
name: Riboflavin_kinase_bac/euk
description: Riboflavin kinase domain, bacterial/eukaryotic

phrase: FPIRLSGPVIKGFGRGSKELGIPTANIPVDGLEEVLPKELGVGVYYGVVALDPATAPAPSSSDSTSGDAAPILPAVLSIGYNPYYKNKTRSIEIHIMPSLTLPSPTAPSEEKEKVKFHKLPDFYGTKLNLLMLGYIRPEYDYVSMEALVEDIRIDCEVARAS
type: DOMAIN
name: Riboflavin_kinase_bac/euk
description: Riboflavin kinase domain, bacterial/eukaryotic
Protein sequence:
MFKKFDEKENVSNCIQLKTSVIKGIKNQLIDQFPGIEQWLNQIMPKKDPVKIVRCHEHIEILTVNGELLFFRQREGPFYPTLRLLHKYPFILPHQQVDKGAIKFVLSGANIMCPGLTSPGAKLYPAAADTVVAIMAEGKQHALCVGVMKMSADDIEKINKGIGIENIHYLNDGLWHMKTYK

Annotated regions:
phrase: QQVDKGAIKFVLSGANIMCPGLTSPGAKLYPAAADTVVAIMAEGKQHALCVGVMKMSADDIEKINKGIGIENIHY
type: DOMAIN
name: PUA
description: PUA domain

phrase: TVNGELLFFRQREGPFYPTLRLLHKYPFILPHQQVDKGAIKFVLSGANIMCPGLTSPGAKLYPAAADTVVAIMAEGKQHALCVGVMKMSADDIEKINKGIGIENIHYLN
type: DOMAIN
name: Uncharacterised_CHP00451
description: Uncharacterised domain CHP00451

phrase: PHQQVDKGAIKFVLSGANIMCPGLTSPGAKLYPAAADTVVAIMAEGKQHALCVGVMKMSADDIEKINKGIGIENIHYL
type: DOMAIN
name: PUA
description: PUA domain

phrase: FDEKENVSNCIQLKTSVIKGIKNQLIDQFPGIEQWLNQIMPKKDPVKIVRCHEHIEILTVNGELLFFRQREGPFYPTLRLLHKY
type: DOMAIN
name: Pre-PUA
description: Pre-PUA domain
Protein sequence:
MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILVADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGLGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFVWTCDDASGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDVNKGQGPVSTSVTEGQQNDQ

Annotated regions:
phrase: LEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFV
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQIL
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: TSHEDMIHDAQMDYYGTRLATCSSDRSVKIF
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: VADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVII
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: KFNDVVWHVSWSITANILAVSGGDNKVTL
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: KEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFV
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: EKTHEHTGHDSSVNSVCWAPHDYGLILACGSSDGAI
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEK
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: TWEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSDGAISLL
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: QWEVKKINNAHTIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: MVSVINTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIF
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: QWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: GQILVADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: SPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLW
type: REPEAT
name: WD40_rpt
description: WD40 repeat
Protein sequence:
MTIYEGNYNGQGKKIAIVTSRFNEFITSKLLSGAEDMLIRHGVARENIDVIWVPGAFEIPYITKRAVHSQKYDGVITLGTVIRGATTHYDYVCNEVSKGVAQVGMNSNIPVLFGVLTTESIEQAVERAGTKAGNKGAETALGLLEMISLNEQFHVESVGMN

Annotated regions:
Protein sequence:
MKTDIEIAQSIELKPIVDVVEKLGISYDDLELYGKYKAKLSFDKIRAVESNPVGKLILVTAINPTPAGEGKSTLTIGLADALNKIGKKTMIAIREPSLGPVMGIKGGAAGGGYAQVLPMEDINLHFTGDMHAITTANNALSALIDNHLHQGNELGIDQRRILWKRVVDLNDRALRHVTVGLGGPLNGIPREDGFDITVASEIMAILCLATDIEDLKRRLANIVIGYRYDRTPVSVGDLQVEGALALILKDAIKPNLVQTIYGTPAFVHGGPFANIAHGCNSVLATTTALHLADYTVTEAGFGADLGAEKFLDIKTPNLPTSPDAVVIVATLRALKMNGGVAKDALTEENVEAVRAGFANLKRHVENIRKFGIPAVVAINEFVSDTEAEIAALKELCALIDVPVELASVWADGVEGGVELAETVVKTIAENPANYKRLYDNDLSVQEKIEKIVTEIYRGSKVNFEKKAQTQIAQVVQNGWDKLPICMAKTQYSFSDNPNALGAPENFEITIRELVPKLGAGFIVALTGDVMTMPGLPKRPAALNMDVESDGTVLGLF

Annotated regions:
phrase: VATLRALKMNG
type: CONSERVED_SITE
name: Formate_THF_ligase_CS
description: Formate-tetrahydrofolate ligase, FTHFS, conserved site

phrase: GIKGGAAGGG
type: CONSERVED_SITE
name: Formate_THF_ligase_CS
description: Formate-tetrahydrofolate ligase, FTHFS, conserved site
Protein sequence:
MSRKKTPKSKAGSAPATSALPAANGPRPVRPGTARPGPEAPPNGPPQPGRSSVGGGGDFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVVDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDSIQAWLTEIQEHAQDDVVLMLLGNKVDSAQERAVKREDAEKLAKDYGLPFMETSAKTGLNVDLAFTAIAKELKQRHTKAPSEPRFQLHDYIKREGRGASCCRP

Annotated regions:
phrase: FKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVVDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDSIQAWLTEIQEHAQDDVVLMLLGNKVDSAQERAVKREDAEKLAKDYGLPFMETSAKTGLNVDLAFT
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain
Protein sequence:
MGIKQLYQVISENAPDAIKAGDIKNHFGRKVAIDASMSIYSFLIAVRSEGQQLMSDTGETTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRTARKTEATEAHEEAKETGTAEDVEKFSRRTVRVTREHNAECKKLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLCFEAPILLRHLTFSEQRKEPIQEIHLSRALEGLDMDRAKFIDLCILLGCDYLEPIPKVGPNTALKLIRDHGSLEKVVEYIQNDPKKKYVIPEDWPYQDARELFLHPDVRDANDPECDFKWEAPDIEGLVEFLVKDKGFNEDRVRNGAARLQKNLKTAQQSRLEGFFKPVARSDEEKATLKRKHDEKLQEQKKRKKEEAKAKKEAKARPRGAG

Annotated regions:
phrase: KLMGIPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLCFEAPILLRHLTFSEQRKEPIQEIHLSRALEGLD
type: DOMAIN
name: XPG-I_dom
description: XPG-I domain

phrase: MGIKQLYQVISENAPDAIKAGDIKNHFGRKVAIDASMSIYSFLIAVRSEGQQLMSDTGETTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRTARKTE
type: DOMAIN
name: XPG_DNA_repair_N
description: XPG, N-terminal

phrase: RAKFIDLCILLGCDYLEPIPKVGPNTALKLIRD
type: CONSERVED_SITE
name: HhH2
description: Helix-hairpin-helix motif, class 2

phrase: GIPYIDAPTEAEAQ
type: CONSERVED_SITE
name: XPG_CS
description: XPG conserved site

phrase: IKPLYVFDGAPPKL
type: CONSERVED_SITE
name: XPG_CS
description: XPG conserved site

phrase: GIPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLCFEAPILLRHLTFSEQRKEPIQEIHLSRALEGLDMDRAKFIDLCILLGC
type: DOMAIN
name: XPG-I_dom
description: XPG-I domain

phrase: MGIKQLYQVISENAPDAIKAGDIKNHFGRKVAIDASMSIYSFLIAVRSEGQQLMSDTGETTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRTARKTE
type: DOMAIN
name: XPG_DNA_repair_N
description: XPG, N-terminal
Protein sequence:
MSDHSFSAVSAVQALKWSDGGLEVLDQRLLPGDVVYQIFDTAAGVAEAIASMRVRGAPAIGIAAAYGVVLGARAAYARDPAHWKRAVEDDIAVLARSRPTAVNLFWALERMREAMAAIEGDPVPALLAAARRIHEDDLAANLAMGELGAAILGGCKGVLTHCNTGALATGGYGTALGVIRSTWRRGALERVYATETRPWSQGARLTVWELGQDRIPATLLADSAAAWLMKSGAVQWVVVGADRIAANGDVANKIGTYSLAVLARHHGVKLMVVAPISTVDWATATGEDIVVEERDPRELLHPLFLGSDSVIGAWNPVFDVTPAALIDAIVTEAGVVTNPSPDTMATLRGKAR

Annotated regions:
Protein sequence:
MAPCKPGSNPPKGRVSAAEGGARREATRRPPREAAAKRWCFTLNNPTEEEIKSLETWLVSDFHYAIVGKEVGEQGTPHLQGFVHLKQKKRLPQLKQLFKRAHWEKARGSDEDNEKYCSKEGNVLLTLGIPAKGNRSDLSEAVAAVKAGRAMTEVARDFSEIYVKYGRGLRDLKLLIGQQPRDFKTEVIVITGPPGCGKSRWAADYPGSKFYKMKGEWWDGYDHQEVVIIDDFYGWLPFCELLRVTDRYPHKVPVKGAFVEFTSRVIIVTSNSPPDAWYSEERCCVQALFRRINKWLVWNHDKFEDAPDCMKKYPINY

Annotated regions:
phrase: IVITGPPGCGKSRWAADYPGSKFYKMKGEWWDGYDHQEVVIIDDFYGWLPFCELLRVTDRYPHKVPVKGAFVEFTSRVIIVTS
type: DOMAIN
name: Helicase_SF3_ssDNA/RNA_vir
description: Helicase, superfamily 3, single-stranded DNA/RNA virus

phrase: KRWCFTLNNPTEEEIKSLETWLVSDFHYAIVGKEVGEQGTPHLQGFVHLKQKKRLPQLKQLFKRAHWEKARGSDEDNEKYCSK
type: DOMAIN
name: CRESS_DNA_REP
description: CRESS-DNA virus replication initiator protein, endonuclease domain

phrase: EAAAKRWCFTLNNPTEEEIKSLETWLVSDFHYAIVGKEVGEQGTPHLQGFVHLKQKKRLPQLKQLFKRAHWEKARGSDEDNEKYCSKEGNVLLTLGI
type: DOMAIN
name: CRESS_DNA_REP
description: CRESS-DNA virus replication initiator protein, endonuclease domain
Protein sequence:
MSFLQEINLKLDVFEGPLDLLLHLIQKLEIDIYDIPITAVTEQYMSYIHAMQTLELEVAGEYLVMAATLMAIKSQMLLPKQELEIIDDEDFFEEEDPREALVAQLLEYRKFKYAATVLHEKEEERKLYYTKEPMDMDDYKEEDTTLPPNQINTIDLFLAFHAMLEKKKNRQPVETTVASDDVSIEEKISAISERMRQVQKGKAVSFDSFFDSYSKQEIVTTFMALLELMKTGAIYAEQENNYSEILLFNTETQQEDTTEVEETQ

Annotated regions:
Protein sequence:
RKLKTGTASVAVALTVVGAGLASQTEVKANRADDARNEVLRGNLVRAELWYRQIQENDQLKLENKGLKTDLREKEEELQGLKDDVEKLTADAELQRLKNERHEEAELERLKSERHDHDKKEAERKALEDKLADKQEHLNGALRYINEKEAEAKEKEAEQKKLKEEKQISDASRQGLRRDLDASREAKKQVEKDLANLTAELDKVKEEKQISDASRQGLRRDLDASREAKKQVEKGLANLTAELDKVKEEKQISDASRQGLRRDLDASREAKKQVEKALEEANSKLAALEKLNKELEESKKLTEKEKAELQAKLEAEAKALKEQLAKQAEELAKLRAEKASDSQTPDAKPGNKAVPGKGQAPQAGTKPNQNKAPMKETKRQLPSTGETT

Annotated regions:
phrase: DKVKEEKQISDASRQGLRRDLDASREAKKQVEKG
type: REPEAT
name: SMCR
description: Streptococcal M proteins C repeat

phrase: DKVKEEKQISDASRQGLRRDLDASREAKKQVEKA
type: REPEAT
name: SMCR
description: Streptococcal M proteins C repeat

phrase: KKLKEEKQISDASRQGLRRDLDASREAKKQVEKD
type: REPEAT
name: SMCR
description: Streptococcal M proteins C repeat

phrase: AKLEAEAKALKEQLAKQAEELAKLRA
type: REPEAT
name: SMDRR
description: Streptococcal M protein, D repeats

phrase: ADAELQRLKNERHEEA
type: DOMAIN
name: Plasminogen_ligand_VEK-30
description: Plasminogen ligand, VEK-30

phrase: EAELERLKSERHDHD
type: DOMAIN
name: Plasminogen_ligand_VEK-30
description: Plasminogen ligand, VEK-30

phrase: RKLKTGTASVAVALTVVGAGLASQ
type: DOMAIN
name: YSIRK_signal_dom
description: YSIRK Gram-positive signal peptide
Protein sequence:
MPSKRFKQLPEKTKDLTADVIENLLATVKKNCTTKFDESIDLSFQVNNKQKKGEVNIRTVVNLPGGTGKKVKVAVVCEDTKAKEAKDAGADIVGSDEFIDKIKAGELNFEKLICTPGMMVKLSKLGKVLGPKGLMPNPKLGSVSEDIKQAVTNAKSGQAEIRNDKDGNIGVSIGKKSFHDDQLLKNFHAILDTLEKEKGNLTLKGDLIKNTFITSSMGVSYKVKLGKAI

Annotated regions:
phrase: MVKLSKLGKVLGPKGLMP
type: CONSERVED_SITE
name: Ribosomal_uL1_CS
description: Large ribosomal subunit protein uL1, conserved site
Protein sequence:
MNKKNIMFLGTASSVGKSTLVAALCRVLKNEEFKVAPFKAMNISLNSYVTKDGAEMGRAQVVQAEACKLEPNALMNPILLKPSGGHTQVIVNGKVYDNIEPYKYKELNKKLKGIVKESYDKLSNKYELIVLEGSGGCAEINLKDSDIANMNMAESVDAPVILVADIDRGGVFASIVGTLELLSKNERSRVKGVIINKFRGEKQHFEAGVKQLEEIIKIPVLGVMPYEYFDIEDEDAVTEKICNKESEDENSIDVAIIRLSHMSNFTDFNVLSRINGVNVRYVESTKYLKNPDVIIIPGTKNTIEDLRILKESKLADEIIKLHDSGTLVLGICGGYQMLGKILLDQQGVEGNTLQEEGLGLLDIKTRFNERKITKQVEAQVVSNLKDINEIENKSLVGYEIHNGISKVGKNVKPFIKDSKGKIIGVCDIEGSVAGTYLHGIFDSEEFTNAFINALKKNNNFDLLEDDELNKISDYKNEQYEKLAKIFSENVDVDKIKEIIGI

Annotated regions:
phrase: VAIIRLSHMSNFTDFNVLSRINGVNVRYVESTKYLKNPDVIIIPGTKNTIEDLRILKESKLADEIIKLHDSGTLVLGICGGYQMLGKILLDQQGVEGNTLQEEGLGLLDIKTRFNERKITKQVEAQVVSNLKDINEIENKSLVGYEIHNGISKVGKNVKPFIKDSKGKIIGVCDIEGSVAGTYLHGIFDSEEFTNAF
type: DOMAIN
name: CobQ_GATase1
description: Cobyric acid synthase, glutamine amidotransferase type 1

phrase: KNIMFLGTASSVGKSTLVAALCRVLKNEEFKVAPFKAMNISLNSYVTKDGAEMGRAQVVQAEACKLEPNALMNPILLKPSGGHTQVIVNGKVYDNIEPYKYKELNKKLKGIVKESYDKLSNKYELIVLEGSGGCAEINLKDSDIANMNMAESVDAPVILVADIDRGGVFASIVGTLELLSKNERSRVKGVIINKFRGEKQHFEAGVKQLEEIIKIPVLGVM
type: DOMAIN
name: CobQ_N
description: Cobyric acid synthase, N-terminal domain

phrase: DVAIIRLSHMSNFTDFNVLSRINGVNVRYVESTKYLKNPDVIIIPGTKNTIEDLRILKESKLADEIIKLHDSGTLVLGICGGYQMLGKILLDQQGVEGNTLQEEGLGLLDIKTRFNERKITKQVEAQVVSNLKDINEIENKSLVGYEIHNGISKVGKNVKPFIKDSKGKIIGVCDIEGSVAGTYLHGIFDSE
type: DOMAIN
name: GATase_3
description: CobB/CobQ-like glutamine amidotransferase

phrase: IMFLGTASSVGKSTLVAALCRVLKNEEFKVAPFKAMNISLNSYVTKDGAEMGRAQVVQAEACKLEPNALMNPILLKPSGGHTQVIVNGKVYDNIEPYKYKELNKKLKGIVKESYDKLSNKYELIVLEGSGGCAEINLKDSDIANMNMAESVDAPVILVADIDRGGVFASIVGTLELLSKNERSRVKGVIINKFRGEKQHFEAGVKQLEEIIKIPVLGVMP
type: DOMAIN
name: CobQ/CobB/MinD/ParA_Nub-bd_dom
description: CobQ/CobB/MinD/ParA nucleotide binding domain
Protein sequence:
MSQAVQTNGTQPLSKTWELSLYELQRTPQEAITDGLEIVVSPRSLHSELMCPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEYEAHQERVLARINKHNNQQALSHSIEEGLKIQAMNRLQRGKKQQIENGSGAEDNGDSSHCSNASTHSNQEAGPSNKRTKTSDDSGLEPDNNNAAMAIDPVMDGASEIELVFRPHPTLMEKDDSAQTRYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATASGQFTVLNGSFSLELVSEKYWKVNKPMELYYAPTKEHK

Annotated regions:
phrase: CPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPTC
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: CPICLDMLKNTMTTKECLHRFCADCIITALRSGNKECPT
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: EIELVFRPHPTLMEKDDSAQTRYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATASGQFTVLNGSFSLELVSEKYWKVNKPMELYY
type: DOMAIN
name: RING2_RAWUL_dom
description: E3 ubiquitin-protein ligase RING2, RAWUL domain

phrase: CLHRFCADC
type: CONSERVED_SITE
name: Znf_RING_CS
description: Zinc finger, RING-type, conserved site

phrase: RYIKTSGNATVDHLSKYLAVRLALEELRSKGESNQMNLDTASEKQYTIYIATASGQFTVLNGSFSLELVSEKYWKVNKPMELYY
type: DOMAIN
name: RAWUL
description: RAWUL domain
Protein sequence:
MKYTLTRIDPDAPVERYPQEQRQTVDDPLAQEATRGIMMGRLEEVLKDTVNWGRKNSLWPYNFGISCCYVEMCTAFTSPHDVARFGAEVIRASPRQADFMVIAGTPFIKMAPVIQRLYEQLLEPKWVISMGACANSGGMYDIYSVVQGVDKFLPVDVYIPGCPPRPEAFLQALMLLQDSIGKERRPLSWVVGDQGIYRPQMPAEKERKRGERINVTNLRTPDEI

Annotated regions:
phrase: CCYVEMCTAFTSPHDVARFGAEVIRASPRQADFMVIAGTPFIKMAPVIQRLYEQLLEPKWVISMGACANSGGMYDIYSVVQGVDKFLPVDVYIPGCPPRPEAFLQALM
type: DOMAIN
name: NADH_UbQ_OxRdtase-like_20kDa
description: NADH:ubiquinone oxidoreductase-like, 20kDa subunit
Protein sequence:
MTMIRTRFAPSPTGYLHIGGARTALYSWLHTRRHGGRFVLRIEDTDRERSTPEAVNAILEGMAWLGLDYDEGPFYQTERYDRYRQHLQTLLDAGQAYYCYCTKDRLERLRTEQQARKEKPRYDGRCRDLDGPPSEEVADEPVIRFRTPLEGHVVVEDAIRGKVQFLNSELDDLVIARGDGSPTYNFTVVVDDLEMGVTDVIRGDDHLNNTPRQIHLYQALGFEPPRFAHVPMILGEDGKRLSKRHGSVSVLQYRDEGYLPEALLNYLVRLGWSHGDQEVFGVDELIQLFDINEVNHSASTFNPSKLQWLNQQHIMRAEPNHIARHLGPFLAERGVDPAEGPALEAVVRTQQERAKTLVEMADNSLFFYRRPEAYEEKAARKNFKEGTAEILEHCQHCFSGLPSWDAESIHGVVTEAAEAFDVKMGKVAQPLRVAVSGSAVSPPIDATLELLGREETVARVGQAAEWVRQNVG

Annotated regions:
phrase: IRTRFAPSPTGYLHIGGARTALYSWLHTRRHGGRFVLRIEDTDRERSTPEAVNAILEGMAWLGLDYDEGPFYQTERYDRYRQHLQTLLDAGQAYYCYCTKDRLERLRTEQQARKEKPRYDGRCRDLDGPPSEEVADEPVIRFRTPLEGHVVVEDAIRGKVQFLNSELDDLVIARGDGSPTYNFTVVVDDLEMGVTDVIRGDDHLNNTPRQIHLYQALGFEPPRFAHVPMILGEDGKRLSKRHGSVSVLQYRDEGYLPEALLNYLVRLGWSHGDQEVFGVDELIQLFDINEVNHSASTFNPSKLQ
type: DOMAIN
name: Glu/Gln-tRNA-synth_Ib_cat-dom
description: Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain

phrase: ARHLGPFLAERGVDPAEGPALEAVVRTQQERAKTLVEMADNSLFFYRRPEAYEEKAARKNFKEGTAEILEHCQHCFSGLPSWDAESIHGVVTEAAEAFDVKMGKVAQPLRVAVSGSAVSPPIDATLELLGREETVARVGQ
type: DOMAIN
name: aa-tRNA-synth_I_cd-bd
description: Aminoacyl-tRNA synthetase, class I, anticodon-binding

phrase: PSPTGYLHIGG
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: MIRTRFAPSPTGYLHIGGARTALYSWLHTRRHGGRFVLRIEDTDRERSTPEAVNAILEGMAWLGLDYDEGPFYQTERYDRYRQHLQTLLDAGQAYYCYCTKDRLERLRTEQQARKEKPRYDGRCRDLDGPPSEEVADEPVIRFRTPLEGHVVVEDAIRGKVQFLNSELDDLVIARGDGSPTYNFTVVVDDLEMGVTDVIRGDDHLNNTPRQIHLYQALGFEPPRFAHVPMILGEDGKRLSKRHGSVSVLQYRDEGYLPEALLNYLVRLGWSHGDQEVFGVDELIQLFDINEVNHSASTFNPSKLQWLNQQH
type: DOMAIN
name: GluRS_core
description: Glutamyl-tRNA synthetase
Protein sequence:
MGKCSGRCTLVAFCCLQLVAALERQIFDFLGYQWAPILANFLHIMAVILGIFGTVQYRSRYLILYAAWLVLWVGWNAFIICFYLEVGQLSQDRDFIMTFNTSLHRSWWMENGPGCLVTPVLNSRLALEDHHVISVTGCLLDYPYIEALSSALQIFLALFGFVFACYVSKVFLEEEDSFDFIGGFDSYGYQAPQKTSHLQLQPLYTSG

Annotated regions:
Protein sequence:
MELLLLSNSTLPGKAWLEHALPLMANQLNGRRSAVFIPFAGVTQTWDEYTDKTAEVLTPLGINVTGIHRIAAPLEAIEKSEIIIVGGGNTFQLLKESRERGLLAPIADRVKRGALYIGWSAGANLACPTIRTTNDMPIVDPNGFDALGLFPLQINPHFTNALPEGHKGETREQRIRELLVVAPELTVIGLPEGNWIQVSNGQAVLGGPNTTWVFKAGEEAVALEAGHRF

Annotated regions: