Protein sequence:
MAFRKENKIKSNFSKISIGLASPEEILENSSGEVLKPETINYRTYKPERDGLFCERIFGPIKDYECHCGKYKRIRYKGIVCDRCGVEVTEKKVRRERMGHIQLVVPVAHIWYFRSLPNKIGYLLGLPTKKLDSIIYYERYVVIQPGVKAEDGIAEFDLLSEEEYLDILDTLPKDNQYLEDTDPNKFIAKMGAEAIYDLLARLDLDALSYELRHRAGNDASQQRKNEALKRLQVVESFRASRGRNKPEWMIVRIVPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLIEIKAPEVILRNEKRMLQESVDSLFDNSRKSSAVKTDANRPLKSLSDSLKGKQGRFRQNLLGKRVDYSARSVIVVGPELRMHECGIPKLMAAELYKPFIIRKLIERGIVKTVKSAKKIVDRKEPVIWDILEHVMKGHPVLLNRAPTLHRLGIQAFQPKMIEGKAIQLHPLACTAFNADFDGDQMAVHLPLSNEAVLEAQMLMLASHNILNPANGAPITVPSQDMVLGLYYITKLRKGAKGEGLTFYGPEEALIAYNEGKVDIHAPVKVIVKDLDENGNIVDVMRETSVGRVIVNEIVPPEVGYINTIISKKSLRDIISAVIKACGVARTADFLDGIKNLGYKMAFQGGLSFNLGDIIIPKEKETLVQRGYEEVEQVINNYNMGFITNNERYNQVIDIWTHVNSELSNILMKTISSDDQGFNSVYMMLDSGARGSKEQIRQLSGMRGLMAKPQKAGAEGGQIIENPILSNFKEGLSVLEYFISTHGARKGLADTALKTADAGYLTRRLVDVSHDVIINEEDCGTLRGLVCTDLKNNDEVIATLYERILGRVSVHDIIHPQTGELLVAGGEEITEDIAKKIQESPIESVEIRSVLTCESKKGVCAKCYGRNLATNHMVQKGEAVGVIAAQSIGEPGTQLTLRTFHAGGTAANIAANASIVAKNNARLEFEELRTVDIVDETGEAAKVVVGRLAEVRFIDVNTGIVLSTHNVPYGSTLYVADGEVVEKGKLIAKWDPFNAVIITEATGKIEFEGVIENVTYKIESDEATGLREIIIIESKDKTKVPSAHILTEDGDLIRTYNLPVGGHVVIENGQKVKAGEVIVKIPRAVGKAGDITGGLPRVTELFEARNPSNPAVVSEIDGEVTMGKVKRGNREIIVTSKTGEVKKYLVPLSKQILVQENDYVRAGTPLSDGATTPADILAIKGPTAVQEYIVNEVQDVYRLQGVKINDKHFEIIVRQMMRKVTIDEPGDTRFLEQQVVDKLEFMEENDRIWGKKVVVDAGDSENLKAGQIVTARKLRDENSMLKRRDLKPVEVRDAVAATSTQILQGITRAALQTSSFMSAASFQETTKVLNEAAINGKIDKLEGMKENVICGHLIPAGTGLREFDKIIVGSKEEYDRILANKKTVLDYNEVE

Annotated regions:
phrase: NILNPANGAPITVPSQDMVLGLYYITKLRKGAKGEGLTFYGPEEALIAYNEGKVDIHAPVKVIVKDLDENGNIVDVMRETSVGRVIVNEIVPPEVGYINTIISKKSLRDIISAVIKACGVARTADFLDGIKNLGYKMAFQGGLSFNLGD
type: DOMAIN
name: RNA_pol_Rpb1_3
description: RNA polymerase Rpb1, domain 3

phrase: SNFSKISIGLASPEEILENSSGEVLKPETINYRTYKPERDGLFCERIFGPIKDYECHCGKYKRIRYKGIVCDRCGVEVTEKKVRRERMGHIQLVVPVAHIWYFRSLPNKIGYLLGLPTKKLDSIIYYERYVVIQPGVKAEDGIAEFDLLSEEEYLDILDTLPKDNQYLEDTDPNKFIAKMGAEAIYDLLARLDLDALSYELRHRAGNDASQQRKNEALKRLQVVESFRASRGRNKPEWMIVRIVPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLIEIKAPEVILRNEKRMLQESVDSLFDNSRKSSAVKTDANRPLKSLSDSLKGKQGRFRQN
type: DOMAIN
name: RNA_pol_Rpb1_1
description: RNA polymerase Rpb1, domain 1

phrase: ITNNERYNQVIDIWTHVNSELSNILMKTISSDDQGFNSVYMMLDSGARGSKEQIRQLSGMRGLMAKPQKAGAEGGQIIENPILSN
type: DOMAIN
name: RNA_pol_Rpb1_4
description: RNA polymerase Rpb1, domain 4

phrase: VDRKEPVIWDILEHVMKGHPVLLNRAPTLHRLGIQAFQPKMIEGKAIQLHPLACTAFNADFDGDQMAVHLPLSNEAVLEAQMLM
type: DOMAIN
name: RNA_pol_asu
description: RNA polymerase, alpha subunit

phrase: GKRVDYSARSVIVVGPELRMHECGIPKLMAAELYKPFIIRKLIERGIVKTVKSA
type: DOMAIN
name: RNA_pol_asu
description: RNA polymerase, alpha subunit

phrase: EWMIVRIVPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLIEIKAPEVILRNEKRMLQESVDSLFDNSRKSSAVKTDANRPLKSLSDSLKGKQGRFRQNLLGKRVDYSARSVIVVGPELRMHECGIPKLMAAELYKPFIIRKLIERGIVKTVKSAKKIVDRKEPVIWDILEHVMKGHPVLLNRAPTLHRLGIQAFQPKMIEGKAIQLHPLACTAFNADFDGDQMAVHLPLSNEAVLEAQMLMLASHNILNPANGAPITVPSQDMVLGLYYI
type: DOMAIN
name: RNA_pol_N
description: RNA polymerase, N-terminal

phrase: GLSVLEYFISTHGARKGLADTALKTADAGYLTRRLVDVSHDVIINEEDCGTLRGLVCTDLKNNDEVIATLYERILGRVSVHDIIHPQTGELLVAGGEEITEDIAKKIQESPIESVEIRSVLTCESKKGVCAKCYGRNLATNHMVQKGEAVGVIAAQSIGEPGTQLTLRTFHAGGTAANIAANASIVAKNNARLEFEELRTVDIVDETGEAAKVVVGRLAEVRFIDVNTGIVLSTHNVPYGSTLYVADGEVVEKGKLIAKWDPFNAVIITEATGKIEFEGVIENVTYKIESDEATGLREIIIIESKDKTKVPSAHILTEDGDLIRTYNLPVGGHVVIENGQKVKAGEVIVKIPRAVGKAGDITGGLPRVTELFEARNPSNPAVVSEIDGEVTMGKVKRGNREIIVTSKTGEVKKYLVPLSKQILVQENDYVRAGTPLSDGATTPADILAIKGPTAVQEYIVNEVQDVYRLQGVKINDKHFEIIVRQMMRKVTIDEPGD
type: DOMAIN
name: RNA_pol_Rpb1_5
description: RNA polymerase Rpb1, domain 5