nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MKTSSIEEALSALSQGKFVIVTDDENRENEGDLILAADKTTAASLGFMIRNTTGIVCLAMHGQRLDELRLPQMVADNTDRKQTAFTVSVDYRHGGVTTGVSASDRAKTILSMVDEQTKPEDLCRPGHIFPLRYKEGGVLKRAGHTEAAVDLTALAGLYPAGVLAELINDDGTMMRLPDLEKFAKEHSIPIITITEIIRHRRRREKLVHCVSQAKIPTEFGEFTAYVYESQLDGIQHIALVKGEIRNRANVLVRVHSECLTGDVFGSRRCDCGPQLRQAMEKINQEGHGAIIYLRGHEGRGIGLGHKLRAYHLQDLGRDTVEANLELGLPADSREYGIGAQMLVDLGLTTIRLLTNNPSKYSGLAGYDLEIVERVPLVVCSTEENKRYLKTKKDKLGHLLDIIDAEAAS

Annotated regions:
phrase: VSQAKIPTEFGEFTAYVYESQLDGIQHIALVKGEIRNRANVLVRVHSECLTGDVFGSRRCDCGPQLRQAMEKINQEGHGAIIYLRGHEGRGIGLGHKLRAYHLQDLGRDTVEANLELGLPADSREYGIGAQMLVDLGLTTIRLLTNNPSKYSGLAGYDLEIVERV
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MGKNITTSRKIFRYDNGELVQQEDQMATEFPLTVMVNGEEFVTLVCSPDSLEELVIGFLASEGVIRFKNEIKRFTIDESLGFAYVDLVSTKKLQLKDYTKRVIGSCCGKGRHFYFQQDVKTAKTAIDGVTITPENCLKLMRDMQKSSKLFHHTGGVHNAALCSTDKLIAVRSDIGRHNALDKLYGYCLLHQVPVRDKLIVFSGRISSEVLLKAAKIGVSAVISKSAPTELAIQMAEELNIMTIGFARNRSFNVYTHHERIQFS

Annotated regions:
Protein sequence:
MTTKIDLRGLLPEELAQLAAELGEASYRGRQLFHWLHRRRATSLEAMTELPGAFRARLAGQAVLPPVEVINRRVAAGGLTRKLLLRLADGELIECVLMSYEDGRRRQTACLSSQVGCAMGCTFCATGQGGFRRNLTPGEIVLQALALVKDVQLRDPEARLSNIVFMGMGEPLLNYRAVLKAVRIFEHPQGWGISHRRITISTCGLVPQIRQLAGEKPPLELAVSLHAATNELRERLMPINRRYPLEELIPACRHYGRITGRRVTFEYALIAGVNDRREDAGRLVELLQGVLAFVNLIPLNPVPGSPYKGVSRAKAWLFASWLQKAGLAAAVRESRGQDIAAACGQLRSNAGREVF

Annotated regions:
phrase: GRRRQTACLSSQVGCAMGCTFCATGQGGFRRNLTPGEIVLQALALVKDVQLRDPEARLSNIVFMGMGEPLLNYRAVLKAVRIFEHPQGWGISHRRITISTCGLVPQIRQLAGEKPPLELAVSLHAATNELRERLMPINRRYPLEELIPACRHYGRITGRRVTFEYALIAGVNDRREDAGRLVELLQGVLAFVNLIPLNPVPGSPYKGVSRAKAWLFASWLQKAGLAAAVRESRGQDI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SQVGCAMGCTFCATGQGGFRRNLTPGEIVLQALALVKDVQLRDPEARLSNIVFMGMGEPLLNYRAVLKAVRIFEHPQGWGISHRRITISTCGLVPQIRQLAGEKPPLELAVSLHAATNELRERLMPINRRYPLEELIPACRHYGRITGRRVTFEYALIAGVNDRRED
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: IDLRGLLPEELAQLAAELGEASYRGRQLFHWLHRRRATSLEAMTELPGAFRARLAGQA
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MRPLNVQIRLGNLRHNYRILKEMHGGKLLAVVKADAYGHGAVRCAFALADLADGFAVATIDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQWQLEALLIRHWKKTVKVWLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFSCADEPESGMTEIQMEAFDLGTEGLEGEESLANSAAILNVPEARRDWGRAGLALYGISPFGGGDDRLKPVMRLSTRIFGERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRRAPSNSPVAVDGKLTRVIGRVSMDMMTIELDASQEGLGHEVELWGDTVNINTVAEAAGTIPYELMCNIKRAKFTYIE

Annotated regions:
phrase: IRLGNLRHNYRILKEMHGGKLLAVVKADAYGHGAVRCAFALADLADGFAVATIDEGIRLRESGITHPIVLLEGVFEASEYEAVEQYSLWPAVGNQWQLEALLIRHWKKTVKVWLKMDSGMHRTGFFPHDYASAYAALKQSEYVDSIVKFSHFSCADEPESGMTEIQMEAFDLGTEGLEGEESLANSAAILNVPEARRDWGRAGLALYGIS
type: DOMAIN
name: Ala_racemase_N
description: Alanine racemase, N-terminal

phrase: VMRLSTRIFGERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRRAPSNSPVAVDGKLTRVIGRVSMDMMTIELDASQEGLGHEVELWGDTVNINTVAEAAGTIPYELMCNIKRAKFTY
type: DOMAIN
name: Ala_racemase_C
description: Alanine racemase, C-terminal

phrase: VMRLSTRIFGERVLQPHSPIGYGATFYTSKSTRVGLIACGYADGYPRRAPSNSPVAVDGKLTRVIGRVSMDMMTIELDASQEGLGHEVELWGDTVNINTVAEAAGTIPYELMCNIK
type: DOMAIN
name: Ala_racemase_C
description: Alanine racemase, C-terminal

phrase: AVVKADAYGH
type: BINDING_SITE
name: Ala_racemase_pyridoxalP-BS
description: Alanine racemase, pyridoxal-phosphate attachment site
Protein sequence:
MTPLTLMNLMIMTLSYIIPILIAVAFLTLVERKILSYMQARKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPFLFIMTPILALLLALTIWIPLPLPFPMADLNLGLLFLLAMSSLTVYSLLWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSTIMLSGNYTLSTLSITQEPIYLIFSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANIMLMNTLTITLFLNPSFLNLPSELFSITLATKVLLLSSSFLWVRASYPRFRYDQLMHLLWKNFLPLTLALCLWHTSMPISYAGLPPA

Annotated regions:
phrase: PFDLTEGESELVS
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_su1_CS
description: NADH:ubiquinone oxidoreductase, subunit 1, conserved site

phrase: GLLQPIADGVKLFIK
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_su1_CS
description: NADH:ubiquinone oxidoreductase, subunit 1, conserved site
Protein sequence:
MGTERAKERAARFAASLVEDGMIVGLGSGSTAELAVRALGERLHDGLRLIGVATSQRTAALARRVGIELRDPDSVDRIDLAIDGADEVEERSLGLLKGRGGALVREKLVARMARRLVIIIDDSKLVAALGARFPLPVEVVPFGWRWCARWLEDLGGRPTLRCRPTGHPFRSDNGNLILDVAFGAIADPAWLDRTIKMLPGVIDHGLFLDMADLVIVGSETGIRLLERSRTVSETSKS

Annotated regions:
Protein sequence:
MGAAPRLSAPRVLVLWAALGAAAHIGPAPDPEDWWSYKDNLQGNFVPGPPFWGLVNAAWSLCAVGKRQSPVDVDLKRVLYDPFLPPLRLSTGGEKLRGTLYNTGRHVSFLPAPRPVVNVSGGPLLYSHRLSELRLLFGARDGAGSEHQINHQGFSAEVQLIHFNQELYGNLSAATRGPNGLAILSLFVNVAGSSNPFLSRLLNRDTITRISYKNDAYFLQDLSLELLFPESFGFITYQGSLSTPPCSETVTWILIDRALNITSLQMHSLRLLSQNPPSQIFQSLSGNGRPLQPLAHRALRGNRDPRHPERRCRGPNYRLHVDDVPHGL

Annotated regions:
phrase: WSYKDNLQGNFVPGPPFWGLVNAAWSLCAVGKRQSPVDVDLKRVLYDPFLPPLRLSTGGEKLRGTLYNTGRHVSFLPAPRPVVNVSGGPLLYSHRLSELRLLFGARDGAGSEHQINHQGFSAEVQLIHFNQELYGNLSAATRGPNGLAILSLFVNVAGSSNPFLSRLLNRDTITRISYKNDAYFLQDLSLELLFPESFGFITYQGSLSTPPCSETVTWILIDRALNITSLQMHSLRLLSQNPPSQIFQSLSGNGRPLQPLAHRALRGN
type: DOMAIN
name: CA_dom
description: Alpha carbonic anhydrase domain

phrase: DWWSYKDNLQGNFVPGPPFWGLVNAAWSLCAVGKRQSPVDVDLKRVLYDPFLPPLRLSTGGEKLRGTLYNTGRHVSFLPAPRPVVNVSGGPLLYSHRLSELRLLFGARDGAGSEHQINHQGFSAEVQLIHFNQELYGNLSAATRGPNGLAILSLFVNVAGSSNPFLSRLLNRDTITRISYKNDAYFLQDLSLELLFPESFGFITYQGSLSTPPCSETVTWILIDRALNITSLQMHSLRLLSQNPPSQIFQSLSGNGRPLQPLAHRALRGN
type: DOMAIN
name: CA_dom
description: Alpha carbonic anhydrase domain

phrase: AAWSLCAVGKRQSPVDVDLKRVLYDPFLPPLRLSTGGEKLRGTLYNTGRHVSFLPAPRPVVNVSGGPLLYSHRLSELRLLFGARDGAGSEHQINHQGFSAEVQLIHFNQELYGNLSAATRGPNGLAILSLFVNVAGSSNPFLSRLLNRDTITRISYKNDAYFLQDLSLELLFPESFGFITYQGSLSTPPCSETVTWILIDRALNITSLQMHSLRLLSQNPPSQIFQSLSGNGRPLQPLAHRAL
type: DOMAIN
name: CA_dom
description: Alpha carbonic anhydrase domain
Protein sequence:
MVTILNAQPAKQIEVSVNAERPSIAGLDRSGLAEALAAIGVPEKSRRMRVAQLWGWLYVRGVRSFDEMSDVSKDLRARLADTYTLDRPEIVSEQVSVDGTRKWLMRLPRRGRERTAPEVETVYIPEADRGTLCISSQVGCTLNCSFCHTGTQPLVRNLEVEEIVGQILLARDRIGDWPGANAPEDGRLLPETDRKITNIVLMGMGEPLYNFDNVRRAMAVAADGDGLSVSKRRITLSTSGVVPEIARWGAESSTMLAISLHATRNDLRDELVPINKRYPIAELMNACRSYPGLSNARRITFEYVMLKDVNDSLDDARTLVRLLSGIPAKINLIPFNPWPGSRYLCSDWGQIERFAELVNRAGYASPVRTPRGRDILAACGQLKSESTRLRASEHISPLVSKTPETAP

Annotated regions:
phrase: EADRGTLCISSQVGCTLNCSFCHTGTQPLVRNLEVEEIVGQILLARDRIGDWPGANAPEDGRLLPETDRKITNIVLMGMGEPLYNFDNVRRAMAVAADGDGLSVSKRRITLSTSGVVPEIARWGAESSTMLAISLHATRNDLRDELVPINKRYPIAELMNACRSYPGLSNARRITFEYVMLKDVNDSLDDARTLVRLLSGIPAKINLIPFNPWPGSRYLCSDWGQIERFAELVNRAGYASPVRTPRGRDI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: KITNIVLMGMGEPLYNFDNVRRAMAVAADGDGLSVSKRRITLSTSGVVPEIARWGAESSTMLAISLHATRNDLRDELVPINKRYPIAELMNACRSYPGLSNARRITFEYVMLKDVND
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: AGLDRSGLAEALAAIGVPEKSRRMRVAQLWGWLYVRGVRSFDEMSDVSKDLRARLAD
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MKRKLKMDNLNINFINDDEHPIPSQDLLLKCLQLVADKHHISHAEVNLNIVSNDEIQQINKQFRNKDKPTNIISFEFEKPQGLPDDIANDFLGDIVIAPAVLENEAKEQNKEINDHWQHIFIHGLLHLLGYDHQDDQEAEVMENLEIQLLAQLGIANPYIEQENQNGR

Annotated regions:
phrase: HGLLHLLGYD
type: CONSERVED_SITE
name: YbeY_CS
description: Endoribonuclease YbeY, conserved site
Protein sequence:
MTITDLVLILFIAALLAYALYDQFIMPRRNGPTLLSIALLHRGRVDSVIFVGLVAILIYNNVTSHGAQMTTWLLSALALMGFYIFWIRTPRIIFKQRGFFFANVWIEYNRIKEMNLSEDGVLVMQLEQRRLLIRVRNIDDLEKIYKLLIENQ

Annotated regions:
Protein sequence:
MLAELHEELETIRERFANLRGHLDLAAKQAEIEQLEVRASDPELWNTPRVAQELMQRLTRLKEEVALWNDLDHRMTSLAELIELAEQEGDESLAADLAAELRAVQREVAQRELEILLSGPYDDRDAFLSIQAGMGGTDAQDWAAMLLRMYTRWAERRGYTVNLIDLSEGEEAGIKSATIEIRGPYAYGYARAEAGVHRLIRLSPFNAAHTRQTSFARVEVMPEVDDAPEVEIKPEDLRIDVFRSGGHGGQGVNTTDSAVRITHLPTGIVVTCQNERSQIQNRETALRVLRARLLERELQRQAEERARLRGEYREAAFGNQMRTYYLHPSTLVKDHRTDYETSNVQAVLDGEIDPFIEAFLRANVRES

Annotated regions:
phrase: RSGGHGGQGVNTTDSA
type: DOMAIN
name: Pep_chain_release_fac_I
description: Peptide chain release factor class I

phrase: ELAEQEGDESLAADLAAELRAVQREVAQRELEILLSGPYDDRDAFLSIQAGMGGTDAQDWAAMLLRMYTRWAERRGYTVNLIDLSEGEEAGIKSATIEIRGPYAYGYARA
type: DOMAIN
name: PCRF
description: Peptide chain release factor

phrase: EVEIKPEDLRIDVFRSGGHGGQGVNTTDSAVRITHLPTGIVVTCQNERSQIQNRETALRVLRARLLERELQRQAEERARLRGEYREAAFGNQMRTYYLHPSTLVKDH
type: DOMAIN
name: Pep_chain_release_fac_I
description: Peptide chain release factor class I

phrase: QAEIEQLEVRASDPELWNTPRVAQELMQRLTRLKEEVALWNDLDHRMTSLAELIELAEQEGDESLAADLAAELRAVQREVAQRELEILLSGPYDDRDAFLSIQAGMGGTDAQDWAAMLLRMYTRWAERRGYTVNLIDLSEGEEAGIKSATIEIRGPYAYGYARAEAGVHRLIRLSPFNAAHTRQTSFAR
type: DOMAIN
name: PCRF
description: Peptide chain release factor
Protein sequence:
MSGFDEGNVTVSGGGGKGGFKKNNGFVEDTSVRDLFKRFINEWKDQDNVFIYKEQLRQHYNLGWHYIEVSIDHLTDFNQELSGRFISSPNELMPSFEDAIKDIIKEMNYNKEQVDEDIQILFKSSANPEPIRYLRAGLISKLVKVQGIVISASRTQPKPSTMVVKCKNCQHTQTLHIRPGIVSSVLPQQCERGSNDAGKPCPNNPYVVLSDQSTFVNQQILKLQESPETIPTGEMPRHIILSLDKSLADKITPGTRIKVLGVLGIFEGGGKRREIAGGTIRTNYLRVLGITSDNAGRDSMHFTPSEEQSFKVFSRRQDLRNIIASSIAPSIYGHEDIKRAISCQLFGGSSKKLPDKMRLRGDINLLLLGDPGTAKSQLLKFVEKVAPISVYTSGKGSSAAGLTASVIREPSTGEYYLEGGAMVVADGGVVCIDEFDKMNVDDRVAIHEAMEQQTISIAKAGITTILNSRTSVLAAANPVYGRYNDAADDNINFQSTILSRFDLIFIVKDPKNEKRDFIISKHVINIHEKSSRSGGSGSVGNNTYDLSNTVVDDSHIGENEVTIQYLKKYIAYARSRISPRLSEDAVTTLKNHYVSVRAKSKEQEMINNGSYGGGGSKNSVETERKKRKNAIPITVRQLEAIIRISESLAKMSLSPIATNEHAKEAIRLFDISTFDAITTNNTVNETLTPERLENIRTAEKYLKDRVPIGSSIRIKDVRFQLSRSGLDHFTILKAVDILVGRDEFEFRNQKRTLFRKQ

Annotated regions:
phrase: GVVCIDEF
type: CONSERVED_SITE
name: MCM_CS
description: Mini-chromosome maintenance, conserved site

phrase: YLKKYIAYARSRISPRLSEDAVTTLKNHYVSVRAKSKEQEMINNGSYGGGGSKNSVETERKKRKNAIPITVRQLEAIIRISESLAKMSLSPIATNEHAKEAIRLFDI
type: DOMAIN
name: MCM_lid
description: MCM, AAA-lid domain

phrase: EQSFKVFSRRQDLRNIIASSIAPSIYGHEDIKRAISCQLFGGSSKKLPDKMRLRGDINLLLLGDPGTAKSQLLKFVEKVAPISVYTSGKGSSAAGLTASVIREPSTGEYYLEGGAMVVADGGVVCIDEFDKMNVDDRVAIHEAMEQQTISIAKAGITTILNSRTSVLAAANPVYGRYNDAADDNINFQSTILSRFDLIFIVKDPKNEKRDFIISKHVINI
type: DOMAIN
name: MCM_dom
description: MCM domain

phrase: IRYLRAGLISKLVKVQGIVISASRTQPKPSTMVVKCKNCQHTQTLHIRPGIVSSVLPQQCERGSNDAGKPCPNNPYVVLSDQSTFVNQQILKLQESPETIPTGEMPRHIILSLDKSLADKITPGTRIKVLGVLG
type: DOMAIN
name: MCM_OB
description: MCM OB domain

phrase: LFKRFINEWKDQDNVFIYKEQLRQHYNLGWHYIEVSIDHLTDFNQELSGRFISSPNELMPSFEDAIKDIIKEMNYNKEQVDEDIQILFK
type: DOMAIN
name: MCM_N
description: MCM, N-terminal domain

phrase: LRNIIASSIAPSIYGHEDIKRAISCQLFGGSSKKLPDKMRLRGDINLLLLGDPGTAKSQLLKFVEKVAPISVYTSGKGSSAAGLTASVIREPSTGEYYLEGGAMVVADGGVVCIDEFDKMNVDDRVAIHEAMEQQTISIAKAGITTILNSRTSVLAAANPVYGRYNDAADDNINFQSTILSRFDLIFIVKDPKNEKRDFIISKH
type: DOMAIN
name: MCM_dom
description: MCM domain

phrase: EKYLKDRVPIGSSIRIKDVRFQLSRSGLDHFTILKAVDILVGRDEFEFRNQKRTLF
type: DOMAIN
name: MCM5_C
description: MCM5, C-terminal domain

phrase: RGDINLLLLGDPGTA
type: DOMAIN
name: MCM_dom
description: MCM domain

phrase: GAMVVADGGVVCID
type: DOMAIN
name: MCM_dom
description: MCM domain

phrase: EAMEQQTISIAKA
type: DOMAIN
name: MCM_dom
description: MCM domain

phrase: VLAAANPVYGRY
type: DOMAIN
name: MCM_dom
description: MCM domain

phrase: ILSRFDLI
type: DOMAIN
name: MCM_dom
description: MCM domain
Protein sequence:
MSKQQIGVVGMAVMGRNLALNIESRGYTVSVFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGTDAAIDSLKPYLEKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKDAYELVAPILTKIAAVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLSNEELANTFTEWNNGELSSYLIDITKDIFTKKDEDGNYLVDVILDEAANKGTGKWTSQSALDLGEPLSLITESVFARYISSLKAQRVAASKVLSGPKAQPAGDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASDEYHWDLNYGEIAKIFRAGCIIRAQFLQKITDAYAENADIANLLLAPYFKKIADEYQQALRDVVAYAVQNGIPVPTFSAAVAYYDSYRAAVLPANLIQAQRDYFGAHTYKRTDKEGIFHTEWLE

Annotated regions:
phrase: GHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLSNEELANTFTEWNNGELSSYLIDITKDIFTKKDEDGNYLVDVILDEAANKGTGKWTSQSALDLGEPLSLITESVFARYISSLKAQRVAASKVLSGPKAQPAGDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASDEYHWDLNYGEIAKIFRAGCIIRAQFLQKITDAYAENADIANLLLAPYFKKIADEYQQALRDVVAYAVQNGIPVPTFSAAVAYYDSYRAAVLPANLIQAQRDYFGAHTYKRTDKEGIFHTE
type: DOMAIN
name: 6PGDH_C
description: 6-phosphogluconate dehydrogenase, C-terminal

phrase: GHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLSNEELANTFTEWNNGELSSYLIDITKDIFTKKDEDGNYLVDVILDEAANKGTGKWTSQSALDLGEPLSLITESVFARYISSLKAQRVAASKVLSGPKAQPAGDKAEFIEKVRRALYLGKIVSYAQGFSQLRAASDEYHWDLNYGEIAKIFRAGCIIRAQFLQKITDAYAENADIANLLLAPYFKKIADEYQQALRDVVAYAVQNGIPVPTFSAAVAYYDSYRAAVLPANLIQAQRDYFGAHTYKRTDKEGIFHTEW
type: DOMAIN
name: 6PGDH_C
description: 6-phosphogluconate dehydrogenase, C-terminal

phrase: ILDEAANKGTGK
type: BINDING_SITE
name: 6PGdom_BS
description: 6-phosphogluconate-binding site

phrase: QIGVVGMAVMGRNLALNIESRGYTVSVFNRSREKTEEVIAENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGTDAAIDSLKPYLEKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKDAYELVAPILTKIAAVAEDGEPCVTYI
type: DOMAIN
name: 6PGDH_NADP-bd
description: 6-phosphogluconate dehydrogenase, NADP-binding
Protein sequence:
MIANQTIVDIVTQVVTPAIQAPFELVDVEYEKMGGDYVLSILIDKPGGITVEDTAQLTDVVSPLLDTIQPDPFPEQYMLEVSSPGLERPLKTAEALSNAVGSYINVSLYKSIDKVKIFEGDLLSFDGETLTIDYMDKTRHKTVDIPYQTVAKARLAVKL

Annotated regions:
phrase: QAPFELVDVEYEKMGGDYVLSILIDKPGGITVEDTAQLTDVVSPLLDTIQPDPFPEQYMLEVSSPGL
type: DOMAIN
name: RimP_N
description: Ribosome maturation factor RimP, N-terminal

phrase: GLERPLKTAEALSNAVGSYINVSLYKSIDKVKIFEGDLLSFDGETLTIDYMDKTRHKTVDIPYQTVAKARLAVK
type: DOMAIN
name: RimP_C
description: Ribosome maturation factor RimP, C-terminal

phrase: LKTAEALSNAVGSYINVSLYKSIDKVKIFEGDLLSFDGETLTIDYMDKTRHKTVDIPYQTVAKARLAV
type: DOMAIN
name: RimP_C
description: Ribosome maturation factor RimP, C-terminal
Protein sequence:
MIDRYKHQQLRIGLVSPQQISAWATKKIPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGDEKEDSKFCEQCGVEFIDSRIRRYQMGYIKLTCPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPITKKPTFLRLRGSFEYEIQSWKYSLPLFFTTQGFDIFRNREISTGAGAIREQLADLDLRIIIENSLVEWKQLGEEGPTGNEWEDRKIVRRKDFLVRRMELAKHFIRTNIEPEWMILCLLPVLPPELRPIIQIEGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSQIREKKPVVWEILQEVMQGHPVLLNRAPTLHRLGIQSFQPILVEGRTICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVLTSGTRRGICANRYNPCNRKNSQNERIYETNYKYMKEPFFCNSYDAIGAYRQKRINLDSPLWLRWQLDQRVIASREVPIEVHYESFGNYHEIYAHYLIVRSVKKETFFIYIRTTVGHISFYREIEEAIQGFSQACSYDT

Annotated regions:
phrase: KKPVVWEILQEVMQGHPVLLNRAPTLHRLGIQSFQPILVEGRTICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLL
type: DOMAIN
name: RNA_pol_asu
description: RNA polymerase, alpha subunit

phrase: GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLAS
type: DOMAIN
name: RNA_pol_asu
description: RNA polymerase, alpha subunit

phrase: EWMILCLLPVLPPELRPIIQIEGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHLASNIGVAKSQIREKKPVVWEILQEVMQGHPVLLNRAPTLHRLGIQSFQPILVEGRTICLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLIGLYVL
type: DOMAIN
name: RNA_pol_N
description: RNA polymerase, N-terminal

phrase: QQLRIGLVSPQQISAWATKKIPNGEIVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGDEKEDSKFCEQCGVEFIDSRIRRYQMGYIKLTCPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDFSFARPITKKPTFLRLRGSFEYEIQSWKYSLPLFFTTQGFDIFRNREISTGAGAIREQLADLDLRIIIENSLVEWKQLGEEGPTGNEWEDRKIVRRKDFLVRRMELAKHFIRTNIEPEWMILCLLPVLPPELRPIIQIEGGKLMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDGHNKVYKSFSDVIEGKEGRFRET
type: DOMAIN
name: RNA_pol_Rpb1_1
description: RNA polymerase Rpb1, domain 1
Protein sequence:
MAEYDLTKRMAPFFDLHLVIPLLEFIEPRSIYDHDSLIKVHRRVLLKTNMIDSVIETYPEGEVPKELEQRKVEILSQREKLKVKVDPVVEILESEPVKAMMDSRELTNNRILEYVTANHGLTEEMLDSLFRYAKFQYECGNYSAASLCLDYYRNIVPQQNPNYLSALYGKLASEILLQEWTHAKDDLTKLRTYIDFNPFDTELESVQQRAWLMHWALFVYFNYPKGRDEIVEMYLNQQPYLNTIQIACPHLLRYLAVAVVTSKTKQKNSLKDLIKVIDIERHNYEXPVTXFLTCLYIKYDFDEAQKKVEEVLSNDFFLTACLEDFRESARLLIFEMFCRIHQCISIQMLAERLNMQQVEAERWIVDLIRTYRIDGAKIDSKLGQVVMGAKTTSVHEQVMENTKRLTFRAQQIALQLEKMKLDKKVCIILNFIYCEDFRNF

Annotated regions:
phrase: KKVEEVLSNDFFLTACLEDFRESARLLIFEMFCRIHQCISIQMLAERLNMQQVEAERWIVDLIRTYRIDGAKIDSKLGQVV
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain

phrase: DLTKRMAPFFDLHLVIPLLEFIEPRSIYDHDSLIKVHRRVLLKTNMIDSVIETYPEGEVPKELEQRKVEILSQREKLKVKVDPVVEILESEPVKAMMDSRELTNNRILEYVTANHGLTEEMLDSLFRYAKF
type: DOMAIN
name: eIF3e_N
description: Eukaryotic translation initiation factor 3 subunit E, N-terminal

phrase: DLTKRMAPFFDLHLVIPLLEFIEPRSIYDHDSLIKVHRRVLLKTNMIDSVIETYPEGEVPKELEQRKVEILSQREKLKVKVDPVVEILESEPVKAMMDSRELTNNRILEYVTANHGLTEEMLDSLFRYAKF
type: DOMAIN
name: eIF3e_N
description: Eukaryotic translation initiation factor 3 subunit E, N-terminal

phrase: ACLEDFRESARLLIFEMFCRIHQCISIQMLAERLNMQQVEAERWIVDLIRTYRIDGAKIDSKLGQVVMGAKTTSVHEQVMENTKR
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain

phrase: VYFNYPKGRDEIVEMYLNQQPYLNTIQIACPHLLRYLAVAVVTSKTKQKNSLKDLIKVIDIERHNYEXPVTXFLTCLYIKYDFDEAQKKVEEVLSNDFFLTACLEDFRESARLLIFEMFCRIHQCISIQMLAERLNMQQVEAERWIVDLIRTYRIDGAKIDSKLGQVVMGAKT
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain
Protein sequence:
MSELKLPSIDYVALAPTLILLGAALVGVLVEAFVPRRLRHMVQLTVAMLAVLSALTMVVVNANDRLITIGGAIAVDGPALFLQGAILVLAAMALLLIGERSVERGGAFVAQAAVTAESADDRRQAEGRPGATEVYPLTSFAVGGMLIFVAANDLLTMFIALEVLSLPLYLLCALARRRRLLSQEAAMKYFLLGAYASAFFLFGVALVYGYTAGVPDRAAGVDFATIDAAVSESQSSSVLLFGGMALIAIGLLFKAAAAPFHVWTPDVYQGAPTPITGFMAACTKVAAFGALLRVFHVAFEGARWDFTPILGVVAVLTMLVGAVLAVTQTDIKRLLAYSSIANAGYLLVGVLAPSSEGVSGTMFYLVAYGFSVLAAFAVVTLVRDGDGEATHLSRWAGLGQRSPFYAGLFTFILLAFAGIPLTSGFTSKFAVFSAAFDGGQGWLVVAGVLTSMVLAFPYLRVVVLMWLSEPGESTPAVVMPGWLTSAALTIGVVATLVLGVVPQPLLDLAAGAAEFVR

Annotated regions:
phrase: ANDLLTMFIALEVLSLPLYLLCALARRRRLLSQEAAMKYFLLGAYASAFFLFGVALVYGYTAGVPDRAAGVDFATIDAAVSESQSSSVLLFGGMALIAIGLLFKAAAAPFHVWTPDVYQGAPTPITGFMAACTKVAAFGALLRVFHVAFEGARWDFTPILGVVAVLTMLVGAVLAVTQTDIKRLLAYSSIANAGYLLVGVLAPSSEGVSGTMFYLVAYGFSVLAAFAVVTLVRDGDGEATHLSRWAGLGQRSPFYAGLFTFILLAFAGIPLTSGFTSKFAVFSAAFDGGQGWLVVAGVLTS
type: DOMAIN
name: ND/Mrp_TM
description: NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domain
Protein sequence:
MSGGTPYIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRPIPPRDEVFEYIIFRGSDIKDLTVCEPPKPQCSLPQDPAIVQSSLGSSSASSFQSVSSYGPFGRMPTYSQFSTSPLVGQQFGAVAGSSLTSFGAETTSSTSLPPSSVVGSTFTQEARTLKTQLSQGRSSSPLDSLRKSPTIEQAVQTASAPHPPSSAAVGRRSPVLSRPLPSSSQKTAESPEQRKGELHKIQRPDTEQKNDYKNDLSRRQPVLSAAQPRRGRGGNRGGRGRFGVRRDGPMKFEKDFDFESANAQFNKEDIDREFHNKLKLKDDKPEKPLNGEDKTDSGVDTQNSEGHAEEEDVLAAGVCYYDKTKSFFDSISCDDNRDRRQTWAEERRMNAETFGLPLRSNRGRGGYRGRGGGMGFRGGRGRGGERRGAPGGVGGFGPSRGYRGGSRGGRGGREFAEYEYRKDNKVAA

Annotated regions:
phrase: DRRQTWAEERRMNAETFGLP
type: DOMAIN
name: TFG_box
description: TFG box

phrase: CYYDKTKSFFDSISCD
type: DOMAIN
name: FFD_box
description: FFD box

phrase: MSGGTPYIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRPIPPRDEVFEYIIFRGSDIKDLTVCEP
type: DOMAIN
name: Sm
description: Sm domain

phrase: MSGGTPYIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRPIPPRDEVFEYIIFRGSDIKDLTVCEPPKPQCSLPQDPAIVQSS
type: DOMAIN
name: Lsm14-like_N
description: Lsm14-like, N-terminal

phrase: PYIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRPIPPRDEVFEYIIFRGSDIKDLTVCE
type: DOMAIN
name: Lsm14-like_N
description: Lsm14-like, N-terminal

phrase: GTPYIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRPIPPRDEVFEYIIFRGSDIKDLT
type: DOMAIN
name: Lsm14-like_N
description: Lsm14-like, N-terminal

phrase: MKFEKDFDFESANAQFNKEDIDREFHNKLKLKDDKPEKPLNGEDKTDSGVDTQNSEGHAEEEDVLAAGVCYYDKTKSFFDSISCDDNRDRRQTWAEERRMNAETFGLP
type: DOMAIN
name: FDF_dom
description: FDF domain

phrase: MKFEKDFDFESANAQFNKEDIDREFHNKLKLKDDKPEKPLNGEDKTDSGVDTQNSEGHAEEEDVLAAGVCYYDKTKSFFDSISCDDNRDRRQTWAEERRMNAETF
type: DOMAIN
name: FDF_dom
description: FDF domain

phrase: VRRDGPMKFEKDFDFESANAQFNKEDIDREFHNKLK
type: DOMAIN
name: DFDF
description: DFDF domain
Protein sequence:
MKQLFATTSRGFEELLKVELTELGAQEAKVVQGGVHYQADDETLYRTLLWSRLASRILFPLIETKIYSDLDLYAAVSGFNWLGLFDERVTFFVDFNGTNQEIRHTQFGAMRVKDGIVDYFERQGKARPDVDKIQPDVRIHAYLNRENLVISLDLSGEALHLRGYREDAGQAPLRETLAAAIVLRSGWQVGSPLVDPMCGSGTLLIEAAQMEAKIAPQLYRLHWGFDFWKAHNQSAWEKVKNEAIELAEEKQREIQPHFYGFDLDHRVLKKAQKNAQNAGVSHLIKWQQGDVAALKNPRLNEVGTVICNPPYGERLGTTPALIALYSVFGQRLKKEFCGWNVSVFSSESTLLDCLRMRASRQFKAKNGPLDCVQKNYQVSERKSDEITAENELEFNRTSEVATDFANRLQKNIKKISKWAKQQGLDAYRLYDADLPEYNLAVDRYADYIVVQEYAAPKNIDENKARQRLLDAVTATLHVTGVETNKLILKVRQKQKGTNQYEKLANKGEYFYVNEYGAQLWVNLTDYLDTGLFLDHRLTRKMIGALAKGKDFLNLFAYTGSATVHAALGGAKSTTTVDMSNTYLNWAEQNLILNDIEGKQHKLIQADCLQWLEKCDRQFDLIFVDPPTFSNSKRMEDSWDVQRDHVKLMRNLKRVLSNNGTIVFSNNKRGFKMNLVALEELGLSAVEISHKTLPLDFERNKQIHNCWMIQHI

Annotated regions:
phrase: TLYRTLLWSRLASRILFPLIETKIYSDLDLYAAVSGFNWLGLFDERVTFFVDFNGTNQEIRHTQFGAMRVKDGIVDYFERQGKARPDVDKIQPDVRIHAYLNRENLVISLD
type: DOMAIN
name: THUMP_dom
description: THUMP domain

phrase: DPMCGSGTLLI
type: CONSERVED_SITE
name: RlmKL-like_Mtase_CS
description: Ribosomal RNA large subunit methyltransferase K/L-like, conserved site

phrase: DLYAAVSGFNWLGLFDERVTFFVDFNGTNQEIRHTQFGAMRVKDGIVDYFERQGKARPDVDKIQPDVRIHAYLNRENLVISL
type: DOMAIN
name: THUMP_dom
description: THUMP domain

phrase: RILFPLIETKIYSDLDLYAAVSGFNWLGLFDERVTFFVDFNGTNQEIRHTQFGAMRVKDGIVDYFERQGKARPDVDKIQPDVRIHAYLNRENLVISLD
type: DOMAIN
name: THUMP_dom
description: THUMP domain

phrase: VICNPP
type: CONSERVED_SITE
name: DNA_methylase_N6_adenine_CS
description: DNA methylase, N-6 adenine-specific, conserved site

phrase: RGYREDAGQAPLRETLAAAIVLRSGWQVGSPLVDPMCGSGTLLIEAAQMEAKIAPQLYRLHWGFDFWKAHNQSAWEKVKNEAIELAEEKQREIQPHFYGFDLDHRVLKKAQKNAQNAGVSHLIKWQQGDVAALKNPRLNEVGTVICNPPYGERLGTTPALIALYSVFGQRLKKEFCGWNVSVFSSESTLLDCLRMRASRQFKAKNGPLDCVQ
type: DOMAIN
name: RlmKL-like_Mtase
description: Ribosomal RNA large subunit methyltransferase K/L-like, methyltransferase domain

phrase: QLFATTSRGFEELLKVELTELGAQEAKVVQGGVHYQADDETLYRTLLWSRLASRI
type: DOMAIN
name: RlmL_1st
description: RlmL, ferredoxin-like domain

phrase: YIVVQEYAAPKNIDENKARQRLLDAVTATLHVTGVETNKLILKVRQKQKGTNQYEKLANKGEYFYVNEYGAQLWVNLTDYLDTGLFLDHRLTRKMIGALAKGKDFLNLFAYTGSATVHAALGGAKSTTTVDMSNTYLNWAEQNLILNDIEGKQHKLIQADCLQWLEKCDRQFDLIFVDPPTFSNSKRMEDSWDVQRDHVKLMRNLKRVLSNNGTIVFSNNKRGF
type: DOMAIN
name: SAM-dep_methyl-trfase
description: S-adenosylmethionine-dependent methyltransferase
Protein sequence:
MIKVEDILRAYRHGFFPMADSREGTVSWCQPYQRAVVPLDTFRPSRSLRRVIDEGQFTIKTNTAFEKVIRACALPRAVEKETWISEEIIEVFLKLHRLGLAHSVESWQNGELAGGLYGLSMGGAFFGESMFFFERDASKVAFAWLVGYLRKKGFSLLDAQIMNPHLESLGAIEIPHEEYMLRLEHALAKKIFFI

Annotated regions: