nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MEPEIKVVNVVVSTQIGTDIDLEYAADILDNAEYEPEQFPGLVCRLSEPKVALLIFRSGKLNCTGARCKEDAVIAINKIVKELKEAGMDLIDNPEVKVQNMVATTELGMEPNLDDISTLECTEYEPEQFPGLVYRLSEPKVVVLIFGSGKVVITGLKVIEDAYIAFDKISKTLKELEEELY

Annotated regions:
phrase: YEPEQFPGLVYRLSEPKVVVLIFGSGKVVITGLKVIEDAYIAFDKISKT
type: CONSERVED_SITE
name: TBP_CS
description: TATA-box binding protein, conserved site
Protein sequence:
MYTKKPTIPENVIERAYKGKCTKEDALLLLEGNPFELFELANDLRAIAAGDTVSYVVNRNIYITNKCVGNCGFCAYRTEKGYILSIEEILKKAGDARKAGAVEVCVQGGYTPEADMEFYLEVIESLKAEYPDLCLHALSPMEVNYAAETSGMSVEEALRRLKKSGLDSLTGTSAEILSDRVRKIICPSKISTQQWIDTVTAAHKAGISTNATIMYGHVETLKERLDHVFTIREIQKETGGFTELIPMSFLPYNNPVGEKMLASGKFSSTGLEDLQLIAISRVILHTYVKNIQATWVKLGKKLAQVALQCGANDLGGTLMEDQISTASGGSHGEYVSPAEFEWMIKGAGRVPVQRDTLYRKIESGFPGQEGLFPGYAKAGMGSKE

Annotated regions:
phrase: VNRNIYITNKCVGNCGFCAYRTEKGYILSIEEILKKAGDARKAGAVEVCVQGGYTPEADMEFYLEVIESLKAEYPDLCLHALSPMEVNYAAETSGMSVEEALRRLKKSGLDSLTGTSAEILSDRVRKIICPSKISTQQWIDTVTAAHKAGISTNATIMYGHVETLKERLDHVFTIREIQKETGGFTELIPMSFLPYNNPVGEKMLASGK
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: IYITNKCVGNCGFCAYRTEKGYILSIEEILKKAGDARKAGAVEVCVQGGYTPEADMEFYLEVIESLKAEYPDLCLHALSPMEVNYAAETSGMSVEEALRRLKKSGLDSLTGTSAEILSDRVRKIICPSKISTQQWIDTVTAAHKAGISTNATIMYGHVETLKERLDH
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: GFTELIPMSFLPYNNPVGEKMLASGKFSSTGLEDLQLIAISRVILHTYVKNIQATWVKLGKKLAQVALQCGANDLGGTLMEDQISTASGGSHGEYVSPAEFEWMIKGAGRVPVQRDTLYRK
type: DOMAIN
name: CofH/MnqC-like_C
description: CofH/MqnC-like, C-terminal domain

phrase: VSYVVNRNIYITNKCVGNCGFCAYRTEKGYILSIEEILKKAGDARKAGAVEVCVQGGYTPEADMEFYLEVIESLKAEYPDLCLHALSPMEVNYAAETSGMSVEEALRRLKKSGLDSLTGTSAEILSDRVRKIICPSKISTQQWIDTVTAAHKAGISTNATIMYGHVETLKERLDHVFTIREIQKETGGFTELIPMSFLPYNNPVGEKMLASGKFSSTGLEDLQLIAISRVILH
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MNLKSLTQPELADILKQLGQPAFRAGQVFAWLHKGVRSYDEMTNLPKALREALEREYPLYAPTAVRKQESQKDGTVKYLWRLSDGNCVETVLMRYRYGNTVCISTEVGCRMGCAFCASTLGGLVRRLEPAEMLDQVLFTQVDSGLPVSHIVLMGIGEPLDNFDNVMRFLELVNSPQGMNISMRHISLSTCGLVPKIDELAARKLQISLAISLHGPNNEIRSKIMPVNKAYPIEELMQAVRRYYDATGRRIHFEYAMIDGVNDTPACAKELLRRLKGLGAHVNLIPLNHVEESPLKPSSREAVAIFQKILEDGGVTATVRRTLGGDIDASCGQLRRKYEKKHE

Annotated regions:
phrase: MNLKSLTQPELADILKQLGQPAFRAGQVFAWLHKGVRSYDEMTNLPKALREALE
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: VGCRMGCAFCASTLGGLVRRLEPAEMLDQVLFTQVDSGLPVSHIVLMGIGEPLDNFDNVMRFLELVNSPQGMNISMRHISLSTCGLVPKIDELAARKLQISLAISLHGPNNEIRSKIMPVNKAYPIEELMQAVRRYYDATGRRIHFEYAMIDGVN
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: YRYGNTVCISTEVGCRMGCAFCASTLGGLVRRLEPAEMLDQVLFTQVDSGLPVSHIVLMGIGEPLDNFDNVMRFLELVNSPQGMNISMRHISLSTCGLVPKIDELAARKLQISLAISLHGPNNEIRSKIMPVNKAYPIEELMQAVRRYYDATGRRIHFEYAMIDGVNDTPACAKELLRRLKGLGAHVNLIPLNHVEESPLKPSSREAVAIFQKILEDGGVTATVRRTLGG
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MPTDPASEYDPTLGKKFVFVTGGVMSGLGKGITAASTGRLLKNAGFDVTAVKIDPYLNVDAGTMNPYQHGEVYVLKDGGEVDLDLGNYERFLDEDMTFDHNITTGKTYQHVIEKERAGDYLGQTVQIIPHVTTDIKRRIREAAEGTDVCLIEVGGTVGDIEGMPYLEALRQFAHEEADEDILFTHVTLVPYSKNGEQKTKPTQHSVKELRSIGLQPDVLVGRADDKLEPHTKEKIALFCDVPTDAVFSNPDVEDIYHVPLMVEEEGLDEYVMQELGLADEALPRDRRDNRWREVVTREREGEVDIALVGKYDLEDAYMSVNEALKHAGLATGVNVNIEWVDSDEMVDESAGSDHRERLEAADGIVVPGGFGSRGTEGKISAIRYARENGVPFLGLCLGFQMAVVEVARNVLGHDDAHSAEMDSDTSHPVIDILPEQYEVSDMGGTMRLGAHRTDITPGTLAEEVYDATACTERHRHRYEVNPNYFEDFADTDLVFSGRAGNRMEVLEHADHPYFLGTQFHPEFRSRPDRASPPFVGLLEAVMDRTGIDGADTAAGGTEVEA

Annotated regions:
phrase: EDAYMSVNEALKHAGLATGVNVNIEWVDSDEMVDESAGSDHRERLEAADGIVVPGGFGSRGTEGKISAIRYARENGVPFLGLCLGFQMAVVEVARNVLGHDDAHSAEMDSDTSHPVIDILPEQYEVSDMGGTMRLGAHRTDITPGTLAEEVYDATACTERHRHRYEVNPNYFEDFADTDLVFSGRAGNRMEVLEHADHPYFLGTQFHPEFRSRPDRASPPFVGLL
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: KFVFVTGGVMSGLGKGITAASTGRLLKNAGFDVTAVKIDPYLNVDAGTMNPYQHGEVYVLKDGGEVDLDLGNYERFLDEDMTFDHNITTGKTYQHVIEKERAGDYLGQTVQIIPHVTTDIKRRIREAAEGTDVCLIEVGGTVGDIEGMPYLEALRQFAHEEADEDILFTHVTLVPYSKNGEQKTKPTQHSVKELRSIGLQPDVLVGRADDKLEPHTKEKIALFCDVPTDAVFSNPDVEDIYHVPLMVEEEGLDEYVMQELG
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: VDIALVGKYDLEDAYMSVNEALKHAGLATGVNVNIEWVDSDEMVDESAGSDHRERLEAADGIVVPGGFGSRGTEGKISAIRYARENGVPFLGLCLGFQMAVVEVARNVLGHDDAHSAEMDSDTSHPVIDILPEQYEVSDMGGTMRLGAHRTDITPGTLAEEVYDATACTERHRHRYEVNPNYFEDFADTDLVFSGRAGNRMEVLEHADHPYFLGTQFHPEFRSRPDRASPPFVGL
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain

phrase: KFVFVTGGVMSGLGKGITAASTGRLLKNAGFDVTAVKIDPYLNVDAGTMNPYQHGEVYVLKDGGEVDLDLGNYERFLDEDMTFDHNITTGKTYQHVIEKERAGDYLGQTVQIIPHVTTDIKRRIREAAEGTDVCLIEVGGTVGDIEGMPYLEALRQFAHEEADEDILFTHVTLVPYSKNGEQKTKPTQHSVKELRSIGLQPDVLVGRADDKLEPHTKEKIALFCDVPTDAVFSNPDVEDIYHVPLMVEEEGLDEYV
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal
Protein sequence:
MAKEIKFSDSARNKLFNGVQQLFDAVKVTMGPRGRNVLIQKSYGAPVITKDGVSVAKEVDLTNPIENMGAQLVKDVASKTADEAGDGTTTATVLAYGVFKEGLRNVISGANPIEIKRGMDKTVNAIVNELNKSSKKIARKDEIIQVATISANSDKKIGELIANAMEKVGSDGVITVEEAKGINDELTVVEGMQFDRGYISPYFVTDTNKMIAKLENPYILITDKKVSSIKDILPILEEIMKTGRPLLIIADDVDGEALTTLVVNKMRGVFNVVAVKAPEFGDKRKQVLEDIAILTGGSFVTDDLGISFDKVTLQDLGQAESVVIDKDNSTIVKGKGLESQIKERISKIKTAIEMTDSDYDKDSLRNRLAKLNKGVAVIKVGAVSEVELKEKKDRVDDALSATKAAIEEGIVIGGGAALVHVSKRINVNTLNLIGDEKIGYQIVMSAIMSPISQIVSNAGFDKGVVINEILKATNPHLGFNAATGKYVDMFQTGIIDPVKVTRIALQNAVSVSSMLLTTEAVIYDVKDDKEDSVPAMPNMGMGGMM

Annotated regions:
phrase: AAIEEGIVIGG
type: CONSERVED_SITE
name: Chaperonin_Cpn60_CS
description: Chaperonin Cpn60, conserved site
Protein sequence:
MALKSPAFRKKFPLLVTGSLLAMQPLASSFVVAAEQYDCAVSATGGWACSPKTPAAALPPRPVHDGSAVSAAGEAPAESGSTAESGPKPVLVTESKGRGLKSRSEDYSHLDWVPREKLTAAQLAETGPYCSGSYIEPIRPGMNDKTNKSDAPTFIGAKASRYQQDSQVASLAGDVVMRQGSMQVEADEANLYQAESRGELAGNVRIRDNGALIVGDHADVQLDTGEAKVDNAEYVMHKSRIRGNALYAKRAENAIIRLKDGTYTTCEPNSNAWQLKGNNITLNPATGFGTATNVTLRVKDIPVLYTPYIYFPIDDRRQSGFLPPTIGTGSDTGFMLVTPYYFNLAPNYDATLYPRYMAKRGLLMEGEFRYLTKSSEGQFGAAFLNDEETERSKQTDYQKNRYMYNWQHKGGLDSRVFTQVDYTKISDPYYFQDLQTDQIGVKSADFVNQQGSVTYRGDNYTARLNAQAYQLATVSNITPYDRLPQITFNGQLPYHPEGLNFDYETEVVRFDRDLQNGNFVNEDGTVERRLDNNVIGLARANGDRLNLKPSVSLPLNWTYGFLKPSLKYQYTQYQLDLDGTGKSQIVAQQNAAAATGTRYVGGEFGSSQNRGVPIASIDGGLYFDRNTTWFGKNYRQTLEPRLFYLYVPEKDQEDIPVFDTSEYTFNYASLFRDNRFSGSDRVGDENKLSLGIDNRWIEEDGFERQRISIGQALYFKDREVQLPGIDPKTRDDAHSNVSPYALEYEYRWNRDWRTTADYNWDPDSRSPRSGSAMLHYQPEDNPNKVVNVGYRYRNDQVRYDQNTGKWSVGGGDYGTPGQPGYVKDYYKIQQHDFSVIWPIVPQWSAISRWQYDYNRNRTLEAFGGFEYDNCCWKLRLINRYWVSYDEFSQNAPENEKGDHGVFLQIVLKGLGGLTGAKVESFLDKGIQGYRQREDQAF

Annotated regions:
phrase: KNRYMYNWQHKGGLDSRVFTQVDYTKISDPYYFQDLQTDQIGVKSADFVNQQGSVTYRGDNYTARLNAQAYQLATVSNITPYDRLPQITFNGQLPYHPEGLNFDYETEVVRFDRDLQNGNFVNEDGTVERRLDNNVIGLARANGDRLNLKPSVSLPLNWTYGFLKPSLKYQYTQYQLDLDGTGKSQIVAQQNAAAATGTRYVGGEFGSSQNRGVPIASIDGGLYFDRNTTWFGKNYRQTLEPRLFYLYVPEKDQEDIPVFDTSEYTFNYASLFRDNRFSGSDRVGDENKLSLGIDNRWIEEDGFERQRISIGQALYFKDREVQLPGIDPKTRDDAHSNVSPYALEYEYRWNRDWRTTADYNWDPDSRSPRSGSAMLHYQPEDNPNKVVNVGYRYRNDQVRYDQNTGKWSVGGGDYGTPGQPGYVKDYYKIQQHDFSVIWPIVPQ
type: DOMAIN
name: LptD_C
description: LptD, C-terminal

phrase: IGAKASRYQQDSQVASLAGDVVMRQGSMQVEADEANLYQAESRGELAGNVRIRDNGALIVGDHADVQLDTGEAKVDNAEYVMHKSRIRGNALYAKRAENAIIRLKDGTYTTCEPNSNAWQLKGNNITLNPAT
type: DOMAIN
name: OstA-like_N
description: Organic solvent tolerance-like, N-terminal
Protein sequence:
MAKSSKVSIVGAGGNVGSIVAYSVAMQGLAHEVILVDRDKDRAQGKALDMNQAAAAMRTHSIVRAANDYTDIEGSKVVVITAGFPRKPGMSRDDLLFANADIVSEVVENVVKHAPDSIIIVVTNPLDTMTYVALKKSGFPKNRVIGMAGILDGARMTHFIYEKLGFGAGQIRATVIGGHGDYMVPLPRYSTVAGIPITDLLTPQELQEVVEATKNGGAQIVKLMGTSAYFAPGKATAIMVEAILQDSKKIYPCSTLLEGEYGVHGIPNGVPVTLGANGVEEIIELQLTPREREEFQRSVDSVKELIDVLENQNYFGEK

Annotated regions:
phrase: KVSIVGAGGNVGSIVAYSVAMQGLAHEVILVDRDKDRAQGKALDMNQAAAAMRTHSIVRAANDYTDIEGSKVVVITAGFPRKPGMSRDDLLFANADIVSEVVENVVKHAPDSIIIVVTNPLDTMTYVALKKSGFPKNRVI
type: DOMAIN
name: Lactate/malate_DH_N
description: Lactate/malate dehydrogenase, N-terminal

phrase: LDGARMTHFIYEKLGFGAGQIRATVIGGHGDYMVPLPRYSTVAGIPITDLLTPQELQEVVEATKNGGAQIVKLMGTSAYFAPGKATAIMVEAILQDSKKIYPCSTLLEGEYGVHGIPNGVPVTLGANGVEEIIELQLTPREREEFQRSVDSVKELID
type: DOMAIN
name: Lactate/malate_DH_C
description: Lactate/malate dehydrogenase, C-terminal
Protein sequence:
MPRSTWFKALLLLVALWAPLSQAETGWQPIQETIRKSDKDNRQYQAIRLDNGMVVLLVSDPQAVKSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYPQADSLAEYLKMHGGSHNASTAPYRTAFYLEVENDALPGAVDRLADAIAEPLLDKKYAERERNAVNAELTMARTRDGMRMAQVSAETINPAHPGSKFSGGNLETLSDKPGNPVQQALKDFHEKYYSANLMKAVIYSNKPLPELAKMAADTFGRVPNKESKKPEITVPVVTDAQKGIIIHYVPALPRKVLRVEFRIDNNSAKFRSKTDELITYLIGNRSPGTLSDWLQKQGLVEGISANSDPIVNGNSGVLAISASLTDKGLANRDQVVAAIFSYLNLLREKGIDKQYFDELANVLDIDFRYPSITRDMDYVEWLADTMIRVPVEHTLDAVNIADRYDAKAVKERLAMMTPQNARIWYISPKEPHNKTAYFVDAPYQVDKISEQTFADWQQKAANIALSLPELNPYIPDDFSLIKSEKKYDHPELIVDESNLRVVYAPSRYFSSEPKADVSLILRNPKAMDSARNQVMFALNDYLAGLALDQLSNQASVGGISFSTNANNGLMVNANGYTQRLPQLFQALLEGYFSYTATEDQLEQAKSWYNQMMDSAEKGKAFEQAIMPAQMLSQVPYFSRDERRKILPSITLKEVLAYRDALKSGARPEFMVIGNMTEAQATTLARDVQKQLGADGSEWCRNKDVVVDKKQSVIFEKAGNSTDSALAAVFVPTGYDEYTSSAYSSLLGQIVQPWFYNQLRTEEQLGYAVFAFPMSVGRQWGMGFLLQSNDKQPSFLWERYKAFFPTAEAKLRAMKPDEFAQIQQAVITQMLQAPQTLGEEALKLSKDFDRGNMRFDSRDKIVAQIKLLTPQKLADFFHQAVVEPQGMAILSQISGSQNGKAEYVHPEGWKVWENVSALQQTMPLMSEKNE

Annotated regions:
phrase: LLGQIVQPWFYNQLRTEEQLGYAVFAFPMSVGRQWGMGFLLQSNDKQPSFLWERYKAFFPTAEAKLRAMKPDEFAQIQQAVITQMLQAPQTLGEEA
type: DOMAIN
name: PqqF-like_C_4
description: Coenzyme PQQ synthesis protein F-like, C-terminal lobe, domain 4

phrase: FRYPSITRDMDYVEWLADTMIRVPVEHTLDAVNIADRYDAKAVKERLAMMTPQNARIWYISPKEPHNKTAYFVDAPYQVDKISEQTFADWQQKAANIALSLPELNPYIPDDFSLIKSEKKYDHPELIVDESNLRVVYAPSRYFSSEPKADVSLILRNPKAMDSARNQVMFALNDYLAGLALDQLSNQASVGGISFSTNANNGLMVNANGYTQRLPQLFQALLEGYFSYTATEDQLEQAKSWYNQMMDSAEKGKAFEQAIMPAQMLSQVPYFSRDE
type: DOMAIN
name: Peptidase_M16_M
description: Peptidase M16, middle/third domain

phrase: GSLEDPEAYQGLAHYLEHMSLMG
type: BINDING_SITE
name: Pept_M16_Zn_BS
description: Peptidase M16, zinc-binding site

phrase: QALKDFHEKYYSANLMKAVIYSNKPLPELAKMAADTFGRVPNKESKKPEITVPVVTDAQKGIIIHYVPALPRKVLRVEFRIDNNSAKFRSKTDELITYLIGNRSPGTLSDWLQKQGLVEGISANSDPIVNGNSGVLAISASLTDKGLANRDQVVAAIFSYLNLLREKGIDKQYFDELAN
type: DOMAIN
name: Peptidase_M16_C
description: Peptidase M16, C-terminal

phrase: VVLLVSDPQAVKSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYPQADSLAEYLKMHGGSHNASTAPYRTAFYLEVENDALPGAVDRLADAIAEPLLDKKYAERERNAVNAELTMARTRDGMRMAQVSAETIN
type: DOMAIN
name: Pept_M16_N
description: Peptidase M16, N-terminal
Protein sequence:
MALLKSKPTSPGKRGEIRVVHHHIYKGKPHAALVEKLKKTGGRNNQGRITVRHIGGGQRQKYRIIDFKRNKDGILGRVERLEYDPNRTALIALISYKDGEKRYIIAPSNLEVGATIQSGADSPISVGNCLPLKNIPVGTTIHCVEMKPGKGAQMLRSAGCSGQLVAKEGVYATLRLRSGEMRKIHVLCRAVIGEVSNSEHNLRALGKAGAKRWRGIRPTVRGVAMNPVDHPHGGGEGRTSGGRHPVSPWGLPTKGYKTRSNKRTDTFIVRGRKKK

Annotated regions:
phrase: ISVGNCLPLKNIPVGTTIHCVEMKPGKGAQMLRSAGCSGQLVAKEGVYATLRLRSGEMRKIHVLCRAVIGEVSNSEHNLRALGKAGAKRWRGIRPTVRGVAMNPVDHPHGGGEGRTSGGRHPVSPWGL
type: DOMAIN
name: Ribosomal_uL2_C
description: Large ribosomal subunit protein uL2, C-terminal

phrase: PTVRGVAMNPV
type: CONSERVED_SITE
name: Ribosomal_uL2_CS
description: Large ribosomal subunit protein uL2, conserved site

phrase: GRNNQGRITVRHIGGGQRQKYRIIDFKRNKDGILGRVERLEYDPNRTALIALISYKDGEKRYIIAPSNLEVGATI
type: DOMAIN
name: Ribosomal_uL2_RNA-bd_dom
description: Large ribosomal subunit protein uL2, RNA-binding domain

phrase: VGNCLPLKNIPVGTTIHCVEMKPGKGAQMLRSAGCSGQLVAKEGVYATLRLRSGEMRKIHVLCRAVIGEVSNSEHNLRALGKAGAKRWRGIRPTVRGVAMNPVDHPHGGGEGRTSGGRHPVSPW
type: DOMAIN
name: Ribosomal_uL2_C
description: Large ribosomal subunit protein uL2, C-terminal
Protein sequence:
MTALQNDTFLRALRRQPTEYTPLWLMRQAGRYLPEYNATRARAGSFLGLAKNPAYATEVTLQPLDRYPLDAAILFSDILTVPDAMGLGLSFAQGEGPRFARPLRTEADVQKLAVPDMASLQYVFDAVAEIRRALVQDGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKAMMYGRPDLMHRILDINAQAVSEYLNAQIEAGAQAVMIFDTWGGALADGMYQAFSLAYMRKVLAGLKREHDGQQIPAIVFTKGGGLWLEGLADTGADAIGLDWTVNLAQARRRTGGRVALQGNIDPTVLFAPEAAIREQVRGVLDSYAAAGGSDGHVFNLGHGISQFTPPESVAVLVDEVHRYSRQLRTSQG

Annotated regions:
phrase: PLWLMRQAG
type: DOMAIN
name: Uroporphyrinogen_deCOase
description: Uroporphyrinogen decarboxylase (URO-D)

phrase: QNDTFLRALRRQPTEYTPLWLMRQAGRYLPEYNATRARAGSFLGLAKNPAYATEVTLQPLDRYPLDAAILFSDILTVPDAMGLGLSFAQGEGPRFARPLRTEADVQKLAVPDMASLQYVFDAVAEIRRALVQDGRQRVPLIGFSGSPWTLACYMVEGGGSDDFRTVKAMMYGRPDLMHRILDINAQAVSEYLNAQIEAGAQAVMIFDTWGGALADGMYQAFSLAYMRKVLAGLKREHDGQQIPAIVFTKGGGLWLEGLADTGADAIGLDWTVNLAQARRRTGGRVALQGNIDPTVLFAPEAAIREQVRGVLDSYAAAGGSDGHVFNLGHGISQFTPPESVAVLVDEVHR
type: DOMAIN
name: Uroporphyrinogen_deCOase
description: Uroporphyrinogen decarboxylase (URO-D)

phrase: IGFSGSPWTLACYMVE
type: DOMAIN
name: Uroporphyrinogen_deCOase
description: Uroporphyrinogen decarboxylase (URO-D)
Protein sequence:
MELLIKAFIMGIVEGLTEFLPISSTGHLIIVGKFIHFTGNFATMFEIVIQLGAILAVVFHYRKKIFASLKNLKPGSWGFNLWFKIFIAFIPAAVIGLLTHKYIEEHLFSPFTVAIALIAGAIMMIVIEDTFGKRYKIDNMDKVDTKKSLLIGIAQVMSLFPGMSRSASTIMGGMLAGLSVKAAAEFSFFLAIPTMFAATTLSLLKGFSAMSLLEWQALAVGFITSFLTALFVVDKFLSYLTRHSLKPFAYYRLAVGVLMILLVAEKIVK

Annotated regions:
Protein sequence:
MNSPASFVKSLLAQCCLGGICEWVVCPGARNMALLQVLAAAEDLVKWTHFDERSAAFFALGRIQDIGLPVAVVTTSGTAAAELLPAVVEAYYQRRPLLLLTADRPAACRGSAAPQAIEQADLFGIYAPTIDLETPESLPEDILQDWDYASPLHINVCLPDPDPAWNPGSCDLYPAEPPEENGFRGSLAELARALRFKSRGGLVVMIGGLDPTEQAPARWLANELKAPVVADATSGLREELAHLALTDADALLREHPPAVLLRLGDVPVARFWRDLEDIPATEVFSVTRTGFSGLARPSSVVTGDLEAILHALGDIDTVGDVNGLRAMNKRRKALMEELLITCPESEQAMVRSFSCFAADGDCIYLGNSMPVRYWNSFAQTSIPTENVRANRGTNGIDGQISGFLGVSARCSRSWALVGDLTAMYDSNALALLPQLDRGTRVLGVINNGGGGIFRTLPGADGQPETMRKLLVQPHAHSFKAIAEQWGMRYLTIRTAEDFDQLDSLEENSQTLVELIPDREQTEQIRLRLANAQV

Annotated regions:
phrase: GICEWVVCPGARNMALLQVLAAAEDLVKWTHFDERSAAFFALGRIQDIGLPVAVVTTSGTAAAELLPAVVEAYYQRRPLLLLTADRPAACRGSAAPQAIEQ
type: DOMAIN
name: Thiamin_PyroP_enz_TPP-bd_dom
description: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain
Protein sequence:
MTPPSRTVLIVSDHTGLTAETTARALLAHFPSQSLKYLQRPFVASVEVARGVAREVAALAERGERPLIFTTITEPAVMRELEAAPARVFDLLGPGLIALEHEFGEKAARSVGRYHDMHDQTSYLARMDALDFALATDDGLGDRQYGLADVILVGVSRAGKTPTSLFLALQHSVRASNYPLAEDDFERESLPIPLEPHRAKLHGLTIDPRRLHAIRTQRKPGSRYASLEQCEYEVRQAERLFGRAGIPVRDTTSASVEEIAAGILAQLRRG

Annotated regions:
Protein sequence:
MGRAFEYRKATKLKRWGNMARTFTRIGKQIAIAVKAGGPDPENNPHLRAVVATAKRENMPKDNVERAIKNAMGKDQKDYKEMNYEGYGPFGIAVFVETATDNTTRTVANVRSVFNKFGGTLGTSGSLDFMFSWKSMFTITKKEGVDMDDLILELIDYGVEEEYDEDEDEITLYGDPKSFAQIQKYLEENGFEVKGAEFTRIPNDEKDLTPEQRATIDKMVERLEEDEDVQNVYTNMKPADNEGEE

Annotated regions:
phrase: AFEYRKATKLKRWGNMARTFTRIGKQIAIAVKAGGPDPENNPHLRAVVATAKRENMPKDNVERAIKNAMG
type: DOMAIN
name: TACO1_YebC_N
description: TACO1/YebC-like, N-terminal domain

phrase: YKEMNYEGYGPFGIAVFVETATDNTTRTVANVRSVFNKFGGTLGTSGSLDFMFSWKSMFTITKKEGVDMDDLILELIDYGVEEEYDEDEDEITLYGDPKSFAQIQKYLEENGFEVKGAEFTRIPNDEKDLTPEQRATIDKMVERLEEDEDVQNVYTN
type: DOMAIN
name: TACO1_YebC-like_2nd/3rd_dom
description: TACO1/YebC-like, second and third domains
Protein sequence:
MTESTSRRPAYARLLDRAVRILAVRDHSEQELRRKLAAPIMGKNGPEEIDATAEDYERVIAWCHEHGYLDDSRFVARFIASRSRKGYGPARIRQELNQKGISREATEKAMRECDIDWCALVRDQATRKYGEPLPTVFSEKVKIQRFLLYRGYLMEDIQDIWLNFAD

Annotated regions:
phrase: DDSRFVARFIASRSRKGYGPARIRQELNQKGISREATEKA
type: DOMAIN
name: RecX_HTH_2nd
description: RecX, second three-helical domain

phrase: DRAVRILAVRDHSEQELRRKL
type: DOMAIN
name: RecX_HTH_1st
description: RecX, first three-helical domain

phrase: CALVRDQATRKYGEPLPTVFSEKVKIQRFLLYRGYLMEDIQD
type: DOMAIN
name: RecX_HTH_3rd
description: RecX, third three-helical domain
Protein sequence:
MNWDTPIDLAAAGSPSALSHQSLRDNIELVEQLLRQVAAQEGGGDLVELLDRLWASHQDRTGEGLALIRELSLEKSVLAIRAFSIYFQLINIVEQHHERKRLRLQASFSADTAQPGSFCWLFDEMKSLGVSTPEIERVLQQLDVRLVFTAHPTEIVRRTIRTKHRRIVHLLDDLDNALSEWQQQQVHTTMLEEIRIWWRTDELHQVRPTVLDEVAHTVHYFEEVLFEAMPRVRSELVRCLDMFHPSLTRSLGTFCRFGSWVGSDRDGNPSVNALVTWKTACHQRSRVLAKYIKSVERLRDLLSLAEGNPPQDLLLALEQDQRDLGEVYERYSVVYLQEPYRLKLSYILERLEHTRERNAWLEVHGPQRLSQPDEPGWLHYYRHAHELLAELHLLRQCLRTTGIGCRPLETLIDQVEVFGFHLAGLDVRQDSTRHEDTLTEVSAKLRLTATPYAELDEQARLEWLVRELQTLRPLIPAELPFSARTEETIQTFRMIRRLQKEFGSEICHTYIISMSKQASDLLEVLLLAEEAGLFDPATGTGTLMVVPLFETVEDLRNAPHVLEQLFSLPLYRCYLTCHQNLQEVMLGYSDSNKDSGFLSSSWEIFLAQQHIQQVARRHGVQLRIFHGRGGTVGRGGGPSYQAILAQPDGTVSGRIKITEQGEVLASKYSLFELAAFNIETVTAAVIQASVLPTSPPGSRNWELRLQELSDVARRTYRQLVYEQEGFIDFFCHVTPIDEISQLQISSRPSRREGRRDLASLRAIPWVFS

Annotated regions:
phrase: VMLGYSDSNKDS
type: ACTIVE_SITE
name: PEPCASE_His_AS
description: Phosphoenolpyruvate carboxylase, His active site

phrase: VFTAHPTEIVR
type: ACTIVE_SITE
name: PEP_COase_Lys_AS
description: Phosphoenolpyruvate carboxylase, Lys active site
Protein sequence:
MDYQVSSPTYDIDYYTSEPCQKINVKQIAARLLPPLYSLVFIFGFVGNMLVILILINCKRLKSMTDIYLLNLAISDLFFLLTVPFWAHYAAAQWDFGNTMCQLLTGLYFIGFFSGIFFIILLTIDRYLAIVHAVFALKARTVTFGVVTSVITWVVAVFASLPGIIFTRSQKEGLHYTCSSHFPYSQYQFWKNFQTLKIVILGLVLPLLVMVICYSGILKTLLRCRNEKKRHRAVRLIFTIMIVYFLFWAPYNIVLLLNTFQEFFGLNNCSSSNRLDQAMQVTETLGMTHCCINPIIYAFVGEKFRNYLLVFFQKHIAKHFCKCCSIFQQEAPERASSVYTRSTGEQEISVGL

Annotated regions:
phrase: GNMLVILILINCKRLKSMTDIYLLNLAISDLFFLLTVPFWAHYAAAQWDFGNTMCQLLTGLYFIGFFSGIFFIILLTIDRYLAIVHAVFALKARTVTFGVVTSVITWVVAVFASLPGIIFTRSQKEGLHYTCSSHFPYSQYQFWKNFQTLKIVILGLVLPLLVMVICYSGILKTLLRCRNEKKRHRAVRLIFTIMIVYFLFWAPYNIVLLLNTFQEFFGLNNCSSSNRLDQAMQVTETLGMTHCCINPII
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM
Protein sequence:
MTSEVIEDEKQFYSKAKTYWKQIPPTVDGMLGGYGHISSIDINSSRKFLQRFLREGPNKTGTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCRDLDVVRRIICSAGLSLLAEERQENLPDEIYHVYSFALR

Annotated regions:
Protein sequence:
MQFFCVNLYRSVLNLLEERMKTEMIEEMVIVGGLVMVQFVYAGNSLLMSYLMSLGLGPFTIVIFSTFATFIILSPFAILFERKQWPNELSLRLIGKLVLISFAGVTLFQSLFLEGIRLTSPAMATAMPNLAPGLIFFIAWIVGLEKMNLKCVYSKLKILGTLLCVFGALAMSVMHSTSISHKEEDDTPIFVFDRDKVVGCIYLLGAVFVLSTNVVLQASTLAEFPAPISLSAITALLGVLITTVVLLLQNRKTKVLASSLISFGNLVGYSVLAGAVSGACVSFNGWAMKKRGPVFVSMFSPFATVISVAFAVLTLGESVSLGSVGGMVLMFVGLYLVLWAKGKEGFSEIESFESEFDSKKPLLS

Annotated regions:
phrase: GCIYLLGAVFVLSTNVVLQASTLAEFPAPISLSAITALLGVLITTVVLLLQNRKTKVLASSLISFGNLVGYSVLAGAVSGACVSFNGWAMKKRGPVFVSMFSPFATVISVAFAVLTLGESVSLGSVGGMVLMFVGLYLV
type: DOMAIN
name: EamA_dom
description: EamA domain

phrase: VMVQFVYAGNSLLMSYLMSLGLGPFTIVIFSTFATFIILSPFAILFERKQWPNELSLRLIGKLVLISFAGVTLFQSLFLEGIRLTSPAMATAMPNLAPGLIFFIAWIVGLEKMNLKCVYSKLKILGTLLCVFGALAM
type: DOMAIN
name: EamA_dom
description: EamA domain
Protein sequence:
MVKYFLGQSVLRSSWDQVFAAFWQRYPNPYSKHVLTEDIVHREVTSDQKLLSRRLLTKTNRMPRWAERLFPANVAHSVYILEDSIVDPQNQTMTTFTWNINHARLMVVEERCVYRVNSDNSGWTEIRREAWVSSSLFGVSRAVQEFGLARFKSNVTKTMKGFEYILAKLQGEAPPKTLVETAKEAKEKAKETALAATEKAKDLASKAATKKQQQQQQFV

Annotated regions:
phrase: DQVFAAFWQRYPNPYSKHVLTEDIVHREVTSDQKLLSRRLLTKTNRMPRWAERLFPANVAHSVYILEDSIVDPQNQTMTTFTWNINHARLMVVEERCVYRVNSDNSGWTEIRREAWVSSSLFGVSRAVQEFGLARFKSNVTKTMKGFEYILAKLQ
type: DOMAIN
name: PRELI/MSF1_dom
description: PRELI/MSF1 domain

phrase: VKYFLGQSVLRSSWDQVFAAFWQRYPNPYSKHVLTEDIVHREVTSDQKLLSRRLLTKTNRMPRWAERLFPANVAHSVYILEDSIVDPQNQTMTTFTWNINHARLMVVEERCVYRVNSDNSGWTEIRREAWVSSSLFGVSRAVQEFGLARFKSNVTKTMKGFEYILAKLQGEA
type: DOMAIN
name: PRELI/MSF1_dom
description: PRELI/MSF1 domain
Protein sequence:
MARGPRYKVPRRRRREGKTNYYKRYTMALSRKPRFVVRKSNKYVWVQVIEFAPEGDKVIAAAHSKELEKKYGWKGYGNSLPAVYLTGMLAALRAKKAGIQYAVPDIGLHKPTKGARVFAAIKAANDVGLEVPVGDVVPDESRIRGEHIASYAESLKNENPEEYQRRFAKLLERGLKPEDYPKHFEEVKAKILEDYKVEQPATTG

Annotated regions:
Protein sequence:
MVGMIRGGMGDQNWSRLVFWLILFSGLLVITLEENPEKDEIFLSQFMAPSTGQVNEHMEETSWAQRCWQDSDCVKEAVAEFNLCFPGSKDSRELFGLNHTNLKQTLLDCIQEKGKLNGHNPKYLELLSSMLDIPRRNLATKPGSSPSPSPSRPPKRSRGPPRPPTRPKSPPPRKSSFPPSRSPPPPPAKKNASKNSTSAPVSPAKKKEDHEKTIIIAVVVTAVSTFLLAALFFLCCSRVCGNGSGGRKNDERPLLSLSSSDYSVGSSINYGGSVKGDKQGHQSFNIYSNQGKMSSFDGSNSDTSDSLEERLSHEGLRNNSITNHGLPPLKPPPGRTASVLSGKSFSGKVEPLPPEPPKFLKVSSKKASAPPPPVPAPQMPSSAGPPRPPPPAPPPGSGGPKPPPPPGPKGPRPPPPMSLGPKAPRPPSGPADALDDDAPKTKLKPFFWDKVQANPEHSMVWNDIRSGSFQFNEEMIESLFGYAAADKNKNDKKGSSGQAALPQFVQILEPKKGQNLSILLRALNATTEEVCDALREGNELPVEFIQTLLKMAPTPEEELKLRLYCGEIAQLGSAERFLKAVVDIPFAFKRLEALLFMCTLHEEMAFVKESFQKLEVACKELRGSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLADVKGTDGKTTLLHFVVQEIIRTEGVRAARTIRESQSFSSVKTEDLLVEETSEESEENYRNLGLEKVSGLSSELEHVKKSANIDADGLTGTVLKMGHALSKARDFVN

Annotated regions:
phrase: ALDDDAPKTKLKPFFWDKVQANPEHSMVWNDIRSGSFQFNEEMIESLFGYAAADKNKNDKKGSSGQAALPQFVQILEPKKGQNLSILLRALNATTEEVCDALREGNELPVEFIQTLLKMAPTPEEELKLRLYCGEIAQLGSAERFLKAVVDIPFAFKRLEALLFMCTLHEEMAFVKESFQKLEVACKELRGSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLADVKGTDGKTTLLHFVVQEIIRTEGVRAARTIRESQSFSSVKTEDLLVEETSEESEENYRNLGLEKVSGLSSELEHVKKSANIDADGLTGTVLKMGHALSKAR
type: DOMAIN
name: FH2_Formin
description: Formin, FH2 domain

phrase: ALDDDAPKTKLKPFFWDKVQANPEHSMVWNDIRSGSFQFNEEMIESLFGYAAADKNKNDKKGSSGQAALPQFVQILEPKKGQNLSILLRALNATTEEVCDALREGNELPVEFIQTLLKMAPTPEEELKLRLYCGEIAQLGSAERFLKAVVDIPFAFKRLEALLFMCTLHEEMAFVKESFQKLEVACKELRGSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLADVKGTDGKTTLLHFVVQEIIRTEGVRAARTIRESQSFSSVKTEDLLVEETSEESEENYRNLGLEKVSGLSSELEHVKKSANIDADGLTGTVLKMGHALSKARDFV
type: DOMAIN
name: FH2_Formin
description: Formin, FH2 domain

phrase: DAPKTKLKPFFWDKVQANPEHSMVWNDIRSGSFQFNEEMIESLFGYAAADKNKNDKKGSSGQAALPQFVQILEPKKGQNLSILLRALNATTEEVCDALREGNELPVEFIQTLLKMAPTPEEELKLRLYCGEIAQLGSAERFLKAVVDIPFAFKRLEALLFMCTLHEEMAFVKESFQKLEVACKELRGSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLADVKGTDGKTTLLHFVVQEIIRTEGVRAARTIRESQSFSSVKTEDLLVEETSEESEENYRNLGLEKVSGLSSELEHVKKSANIDADGLTGTVLKMGHALSKAR
type: DOMAIN
name: FH2_Formin
description: Formin, FH2 domain
Protein sequence:
MTKSEQQADSRHNVIDLVGNTPLIALKKLPKALGIKPQIYAKLELYNPGGSIKDRIAKSMVEEAEASGRIHPSRSTLIEPTSGNTGIGLALIGAIKGYRTIITLPEKMSNEKVSVLKALGAEIIRTPTAAAWDSPESHIGVAKKLEKEIPGAVILDQYNNMMNPEAHYFGTGREIQRQLEDLNLFDNLRAVVAGAGTGGTISGISKYLKEQNDKIQIVGADPFGSILAQPENLNKTDITDYKVEGIGYDFVPQVLDRKLIDVWYKTDDKPSFKYARQLISNEGVLVGGSSGSAFTAVVKYCEDHPELTEDDVIVAIFPDSIRSYLTKFVDDEWLKKNNLWDDDVLARFDSSKLEASTTKYADVFGNATVKDLHLKPVVSVKETAKVTDVIKILKDNGFDQLPVLTEDGKLSGLVTLSELLRKLSINNSNNDNTIKGKYLDFKKLNNFNDVSSYNENKSGKKKFIKFDENSKLSDLNRFFEKNSSAVITDGLKPIHIVTKMDLLSYLA

Annotated regions:
phrase: DLVGNTPLIALKKLPKALGIKPQIYAKLELYNPGGSIKDRIAKSMVEEAEASGRIHPSRSTLIEPTSGNTGIGLALIGAIKGYRTIITLPEKMSNEKVSVLKALGAEIIRTPTAAAWDSPESHIGVAKKLEKEIPGAVILDQYNNMMNPEAHYFGTGREIQRQLEDLNLFDNLRAVVAGAGTGGTISGISKYLKEQNDKIQIVGADPFGSILAQPENLNKTDITDYKVEGIGYDFVPQVLDRKLIDVWYKTDDKPSFKYARQLISNEGVLVGGSSGSAFTAVVKYCEDHPELTEDDVIVAIFP
type: DOMAIN
name: TrpB-like_PALP
description: Tryptophan synthase beta chain-like, PALP domain

phrase: VKDLHLKPVVSVKETAKVTDVIKILKDNGFDQLPVLTEDGKLSGLVTLSELLRK
type: DOMAIN
name: CBS_dom
description: CBS domain

phrase: PVVSVKETAKVTDVIKILKDNGFDQLPVLTEDGKLSGLVTLSELLRKL
type: DOMAIN
name: CBS_dom
description: CBS domain

phrase: KFIKFDENSKLSDLNRFFEKNSSAVITDGLKPIHIVTKMDLLSYL
type: DOMAIN
name: CBS_dom
description: CBS domain

phrase: KLELYNPGGSIKDRIAKS
type: BINDING_SITE
name: P-phosphate_BS
description: Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site

phrase: NATVKDLHLKPVVSVKETAKVTDVIKILKDNGFDQLPVLTEDGKLSGLVTLSELLRKLSINNSNNDNTIKGKYLDFKKLNNFNDVSSYNENKSGKKKFIKFDENSKLSDLNRFFEKNSSAVITDGLKPIHIVTKMDLLS
type: DOMAIN
name: CBS_C
description: Cystathionine beta-synthase, C-terminal domain

phrase: HLKPVVSVKETAKVTDVIKILKDNGFDQLPVLTEDGKLSGLVTLSELLRKLSINNSNND
type: DOMAIN
name: CBS_dom
description: CBS domain
Protein sequence:
MQLQGPVFVGVPLLGPILICMLIHQPSSRCEDERKLPWCPPHKVILLVWVTIYSVMGYASYLVWKELGGGFRWPLALPLGLYSFQLALSWTFLVLFLAADSPGLALLDLLLLYGLVASLVFIWQPINKLAALLLLPYLAWLTVTTAITYRLWRDSLCPTYQP

Annotated regions:
Protein sequence:
MDIYVCTVCGYEYDPAKGDPDSGIKPGTKFEDLPDDWACPVCGASKDAFEKQ

Annotated regions:
phrase: LPDDWACPVC
type: BINDING_SITE
name: Rubredoxin_Fe_BS
description: Rubredoxin, iron-binding site

phrase: MDIYVCTVCGYEYDPAKGDPDSGIKPGTKFEDLPDDWACPVCGASKDAFEK
type: DOMAIN
name: Rubredoxin-like_dom
description: Rubredoxin-like domain

phrase: YVCTVCGYEYDPAKGDPDSGIKPGTKFEDLPDDWACPVCGASKDA
type: DOMAIN
name: Rubredoxin_dom
description: Rubredoxin domain

phrase: YVCTVCGYEYDPAKGDPDSGIKPGTKFEDLPDDWACPVCGASKDAFE
type: DOMAIN
name: Rubredoxin_dom
description: Rubredoxin domain

phrase: IYVCTVCGYEYDPAKG
type: DOMAIN
name: Rubredoxin_dom
description: Rubredoxin domain

phrase: LPDDWACPVCGASKDA
type: DOMAIN
name: Rubredoxin_dom
description: Rubredoxin domain
Protein sequence:
MPRRGAVPKREVLPDPVYQSKVLTKLINQVMLKGKKSLAESIVYGAMDIIKEKTGKNPLEVFETAMKNVMPVLEVKARRVGGANYQVPVEVRHDRRQTLAIRWLTNYARERAGKSMKEKLANEIMDAAAGTGGAVKKKEDTHKMAEANKAFAHYRW

Annotated regions:
phrase: PRRGAVPKREVLPDPVYQSKVLTKLINQVMLKGKKSLAESIVYGAMDIIKEKTGKNPLEVFETAMKNVMPVLEVKARRVGGANYQVPVEVRHDRRQTLAIRWLTNYARERAGKSMKEKLANEIMDAAAGTGGAVKKKEDTHKMAEAN
type: DOMAIN
name: Ribosomal_uS7_dom
description: Small ribosomal subunit protein uS7 domain

phrase: SKVLTKLINQVMLKGKKSLAESIVYG
type: CONSERVED_SITE
name: Ribosomal_uS7_CS
description: Small ribosomal subunit protein uS7, conserved site