Protein sequence:
MDAKARNCLLQHKEALEKDIKTSYIMDHMISNGVLTVVEEEKVKSQATQYQRAAALIKMILNKDNYAYISFYNALLHEGYKDLAGLLHSGLPLVSSSSGKDTDGGNTSFVRTVLCEGGVPQRPVIFVTRKKLVSAIQQKLWKLNGEPGWVTIYGMAGCGKSVLAAEAVRDHALLEGCFSGGVHWVSIGKQDKSGLLMKLQNLCTRLGQEESFSQRLPLNIEEAKDRLRVLMLRKHPRSLLILDDVWDPWVLKAFDNQCQILLTTRDKSVTDSVMGPKYVIPVESGLGKEKGLEILSLFVNMKKEDLPVEAHSIIKECKGSPLVVSLVGALLRDFPNRWAYYLRQLQNKQFKRIRKSSSYDYEALDEAMSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCVLWDLETEEVEDILQEFVNKSLLFCNRNGKSFCYYLHDLQVDFLTEKNRSQLQDLHRKMVTQFQRYHQPHTLSPGQEDCMYWYNFLAYHMASAGMHKELCALMFSLDWIKAKTELVGPAHLIHEFVEYRHILDEKDCAVCENFQEFLSLNGHLLGRQPFPNIVQLGLCEPETSEVYQQAKLQAKQEVDTGRLYLEWINKKTIKNLSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSVDKKVKIWDSGTGKLVHTYEEHSEQVNCCHFTNKSNHLLLATGSNDSFLKLWDLNQKECRNTMFGHTNSVTHCRFSPDDELLASCSADGTLKLWDVRSANEKKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDRIIVAAKNKVLLLDIHTSGLLTEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRVKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETRKVCKNSAIVLKQEIDVVFQENEMMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEEGAIKIIELPNNRVFSSGIGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTEEYVFLQAHQETVKDFRLLRDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFELPSPLHELKGHNSCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHLCAPISIEEGTATHGGWVTDVCFSPDRKMLVSAGGYLKWWNVVTGESSQTFYTNGTNLKKIHVSPDFRTYVTVDNLGILYILQVLE

Annotated regions:
phrase: FTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFELPSPLH
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: DIKDYYTDLSILQKDVKVPTKVLCVLWDLETEEVEDILQEFVNKSLLFCNRNGKSFCYYLHDLQVDF
type: DOMAIN
name: APAF1_WHD
description: Apoptotic protease-activating factor 1, winged-helix domain

phrase: IKAHEDEVLCCAFSSDDSYIATCSVDKKVKIWDSGTGKLVH
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: SRVKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: QTEEYVFLQAHQETVKDFRLLRDSRLLSWSFDGTVKVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: KTGQIDYLPEAQVSCCCLSPHLEYVAFGDEEGAIKII
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: TGKLVHTYEEHSEQVNCCHFTNKSNHLLLATGSNDSFLKLW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: QKECRNTMFGHTNSVTHCRFSPDDELLASCSADGTLKLW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: SINVKRFFLSSEDPPEDVEVIVKCCSWSADGDRIIVAAKNKVLLL
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: TGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: NNRVFSSGIGHKKAVRHIQFTADGKTLISSSEDSVIQVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: TSGLLTEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: KNLSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVF
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: TGEKLLDIKAHEDEVLCCAFSSDDSYIATCSVDKKVKIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: ISIEEGTATHGGWVTDVCFSPDRKMLVSAGGYLKWW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LPSPLHELKGHNSCVRCSAFSLDGILLATGDDNGEIRIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LASCSADGTLKLWD
type: CONSERVED_SITE
name: WD40_repeat_CS
description: WD40 repeat, conserved site

phrase: IATCSVDKKVKIWD
type: REPEAT
name: G-protein_beta_WD-40_rep
description: G-protein beta WD-40 repeat

phrase: LATGSNDSFLKLWD
type: REPEAT
name: G-protein_beta_WD-40_rep
description: G-protein beta WD-40 repeat

phrase: LASCSADGTLKLWD
type: REPEAT
name: G-protein_beta_WD-40_rep
description: G-protein beta WD-40 repeat

phrase: MDAKARNCLLQHKEALEKDIKTSYIMDHMISNGVLTVVEEEKVKSQATQYQRAAALIKMILNKDNYAYISFYNALLHEGYKDLAGLLHS
type: DOMAIN
name: CARD
description: CARD domain

phrase: MFGHTNSVTHCRFSPDDELLASCSADGTLKLWDVRSANEKK
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LKGHNSCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLH
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: KKLVSAIQQKLWKLNGEPGWVTIYGMAGCGKSVLAAEAVRDHALLEGCFSGGVHWVSIGKQDKSGLLMKLQNLCTRLGQEESFSQRLPLNIEEAKDRLRVLMLRKHPRSLLILDDVWDPWVLKAFDNQCQILLTTRDKSVTDSVMGPKYVIPVESGLGKEKGLEILSLFVNMKKEDLPVEAHSIIKECKGSPLVVSLVGALLRDFPNRWAYYLRQLQNKQFKRIRKSSSYDYEALDEAMSISVE
type: DOMAIN
name: NB-ARC
description: NB-ARC

phrase: LQAHQETVKDFRLLRDSRLLSWSFDGTVKVWNVITGRIER
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LATGSNDSFLKLWD
type: CONSERVED_SITE
name: WD40_repeat_CS
description: WD40 repeat, conserved site

phrase: CRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWET
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: YEEHSEQVNCCHFTNKSNHLLLATGSNDSFLKLWDLNQKECRN
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: VRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLL
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LATGDDNGEIRIWN
type: CONSERVED_SITE
name: WD40_repeat_CS
description: WD40 repeat, conserved site

phrase: NCLLQHKEALEKDIKTSYIMDHMISNGVLTVVEEEKVKSQATQYQRAAALIKMILNKDNYAYISFYNALLHEGYKDLAGLLHSGL
type: DOMAIN
name: APAF1_CARD_dom
description: Apoptotic Protease-Activating Factor 1, CARD domain

phrase: RNCLLQHKEALEKDIKTSYIMDHMISNGVLTVVEEEKVKSQATQYQRAAALIKMILNKDNYAYISFYNALLHEGYKDLAGLLH
type: DOMAIN
name: CARD
description: CARD domain

phrase: ECRNTMFGHTNSVTHCRFSPDDELLASCSADGTLKLW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: GKLVHTYEEHSEQVNCCHFTNKSNHLLLATGSNDSFLKLW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: KLLDIKAHEDEVLCCAFSSDDSYIATCSVDKKVKIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: THGGWVTDVCFSPDRKMLVSAGGYLKW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: FLQAHQETVKDFRLLRDSRLLSWSFDGTVKVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: RDFTCHQGTVLSCAISSDATKFSSTSADKTAKIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: VRPHTDAVYHACFSQDGQRIASCGADKTLQV
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: VADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRV
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: SPLHELKGHNSCVRCSAFSLDGILLATGDDNGEIRIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: GHKKAVRHIQFTADGKTLISSSEDSVIQVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: GIGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTEEYVF
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LQDLHRKMVTQFQRYHQPHTLSPGQEDCMYWYNFLAYHMASAGMHKELCALMFSLDWIKAKTELVGPAHLIHEFVEYRHILDEKDCAVCENFQEFLSLNGHLLGRQPFPNIVQLGLCEPETSEVYQQAKLQAKQ
type: DOMAIN
name: APAF1_C
description: APAF-1 helical domain