nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSESPYTSGTTHFGFRDVAAKDKQKLVGEVFTSVARNYDLMNDLMSLGIHRAWKRYFVATAQVKPGDRVLDLAGGTGDIAVLLKERVGNEGAVVLGDINAGMLSVGRDRLTNRGLVAGFDYVQCNAEALPFPDQSFDLVTISFGLRNVTDKDAALREMYRVLKVGGQARVLEFSEVTADWFKPIYDFHSFKILPKLGQLFARDADSYQYLAESIRKHPPQDSLKGMMGEAGFARCHYKNLTGGIVAIHSGYKI

Annotated regions:
phrase: RVLKVGGQARVLEF
type: CONSERVED_SITE
name: UbiE/COQ5_MeTrFase_CS
description: UbiE/COQ5 methyltransferase, conserved site

phrase: YDLMNDLMSLGIHRA
type: CONSERVED_SITE
name: UbiE/COQ5_MeTrFase_CS
description: UbiE/COQ5 methyltransferase, conserved site
Protein sequence:
MDGVNDAANHTVESVPGRPSTASAPLEAGRRSPTGSRLYPRVTSFRSRRGALTPNQQGAWDRMWPRIGREVGDEPLDADAWFGRQAPLVIEIGCGTGTATAAMAAAEPHVNLIGIEVYQPGLAQLVQRIERDGIDNIRLLRGDAVDVLEHMIAAESLTGVRVFFPDPWPKARHHKRRLLQPATVALIAGRLRPGGVLHVATDHAGYAEHIAAVGAAEPLLVGLNEATGGDDERARTLAPIGLDRPVTKFEDKAHRAGSAITEFVWGKIE

Annotated regions:
Protein sequence:
MHSSATFDVIVVGGGHAGTEAAAAAARLGARVALVSFDPTLIGTMSCNPAIGGLGKGHLMREVDALDGWMARAADAAAIHYRMLNASKGAAVQGPRIQADRKLYRAAIQTLLAAEEGITVVAGEAAALRLSNGGRIAGLDLADGTALTARAVVLATGTFLGGRLFRGEERMEGGRIGEAGSHRLAGQLRAAHLPMARLKTGTPPRLDGRTIDWARLQEQPSDGGRWTCSTWNNARTVPQIFCAITRTNAESHRIIAENLHRSPLFTGAIGAAGPRYCPSIEDKIHRFADRDGHQVFLEPEGLDTHLVYPNGISTSLPADVQLAMLRTIEGLEAVEMVVPGYAVEYDHIDPRALDRTLQVRAMPGVWCAGQINGTTGYEEAAAQGLVAGANAALAVQGREPLILDRSESYIGVMVDDLVLQGVTEPYRMLTARAEYRLRLRADNAATRLTPKGIALGLVRPATAALFARRMAERARAGALLEAPVATADYGAIGLPLPGDGIARRRIDLLRFPGATVERLTILVPEIESIDRAILSEVVEDAHYAPYIARHEAELRALAANEAILLDPALDYAAIGGLSREMVERLSKARPETLGQAARIDGVTPAALTAIMVHSRRRAA

Annotated regions:
phrase: ALAANEAILLDPALDYAAIGGLSREMVERLSKARPETLGQAARIDGVTPAALTAI
type: DOMAIN
name: MnmG_C
description: tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG, C-terminal

phrase: AHYAPYIARHEAELRALAANEAILLDPALDYAAIGGLSREMVERLSKARPETLGQAARIDGVTPAALTAIM
type: DOMAIN
name: MnmG_C_subdom
description: tRNA uridine 5-carboxymethylaminomethyl modification enzyme, C-terminal subdomain

phrase: GPRYCPSIEDKIHR
type: CONSERVED_SITE
name: MnmG-rel_CS
description: MnmG-related, conserved site

phrase: RRIDLLRFPGATVERLTILVPEIESIDRAILSEVVEDAHYAPYIAR
type: DOMAIN
name: GIDA_C_N
description: tRNA uridine 5-carboxymethylaminomethyl modification enzyme, C-terminal, N-terninal subdomain

phrase: DVIVVGGGHAGTEAAAAAARLGARVALVSFDPTLIGTMSCNPAIGGLGKGHLMREVDALDGWMARAADAAAIHYRMLNASKGAAVQGPRIQADRKLYRAAIQTLLAAEEGITVVAGEAAALRLSNGGRIAGLDLADGTALTARAVVLATGTFLGGRLFRGEERMEGGRIGEAGSHRLAGQLRAAHLPMARLKTGTPPRLDGRTIDWARLQEQPSDGGRWTCSTWNNARTVPQIFCAITRTNAESHRIIAENLHRSPLFTGAIGAAGPRYCPSIEDKIHRFADRDGHQVFLEPEGLDTHLVYPNGISTSLPADVQLAMLRTIEGLEAVEMVVPGYAVEYDHIDPRALDRTLQVRAMPGVWCAGQINGTTGYEEAAAQGLVAGANAALAVQGR
type: DOMAIN
name: MnmG_N
description: MnmG, N-terminal domain

phrase: AGQINGTTGYEEAAAQGLVAGAN
type: CONSERVED_SITE
name: MnmG-rel_CS
description: MnmG-related, conserved site
Protein sequence:
MSAQVSLELHHRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTMRTTVNAQTRDRRKGVQPPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNCQVSETDIPNVFAVRVNYLLYRAQKERDETFYVGTRFDKVRRLEYDNWRLLERDIVLDQAVITSHNLSVLF

Annotated regions:
Protein sequence:
MSSVTKRPRAKRIRLPLEIIDTILQYLDPILHAKVVGLTTRVKCRLLRDNNVEDYLKLTPASYHPTTDQFICNYLGITNQPMAPYLVPLLSFGKASCVFFNKCIPEDVRIVTLNWPLPLLENFLSKQFLWYKLARKLIEHERRMDRCVTPSTVQINLYDDNEDYLNCFNCFNCCKDNLVSFNCCIVDCNINDMNRCPDLQIDVYLDDNIISLYLYFLFRIYRIVKE

Annotated regions:
Protein sequence:
MGIRSYQAYPPGTRDGSIVNSKEMVNSKEMIESEPQKVLVRGRHIARGRNHRGIITSRHRGGGHRRLYRMIDFRRDKRDVSGEIKTIEYDPNRNTCICLTNYGDGKKRYILYPHGIEIGNKIISGIEAPISIGNTSPLSTNMPLGASVHNIETRPGRGGQLVRAAGTTAKILAKEGQLVTLKLPSGEIRSLPQKCFATIGQIGNIDANNLKLGKAGSRRWLGKRPSVRGVVMNPIDHPHGGGEGKVPIGRKKPLTPWGHPALGRKSRKRRKYSDTLILRRRMA

Annotated regions:
phrase: ISIGNTSPLSTNMPLGASVHNIETRPGRGGQLVRAAGTTAKILAKEGQLVTLKLPSGEIRSLPQKCFATIGQIGNIDANNLKLGKAGSRRWLGKRPSVRGVVMNPIDHPHGGGEGKVPIGRKKPLTPWGH
type: DOMAIN
name: Ribosomal_uL2_C
description: Large ribosomal subunit protein uL2, C-terminal

phrase: IGNTSPLSTNMPLGASVHNIETRPGRGGQLVRAAGTTAKILAKEGQLVTLKLPSGEIRSLPQKCFATIGQIGNIDANNLKLGKAGSRRWLGKRPSVRGVVMNPIDHPHGGGEGKVPIGRKKPLTPW
type: DOMAIN
name: Ribosomal_uL2_C
description: Large ribosomal subunit protein uL2, C-terminal

phrase: GRNHRGIITSRHRGGGHRRLYRMIDFRRDKRDVSGEIKTIEYDPNRNTCICLTNYGDGKKRYILYPHGIEIGNKII
type: DOMAIN
name: Ribosomal_uL2_RNA-bd_dom
description: Large ribosomal subunit protein uL2, RNA-binding domain

phrase: PSVRGVVMNPI
type: CONSERVED_SITE
name: Ribosomal_uL2_CS
description: Large ribosomal subunit protein uL2, conserved site
Protein sequence:
MIEFGDFYQRIAKGNLSHWLDTLPAQLSAWQRESLHGKFKQWFNSVEHLPALTPTRLDLLNGVRAEMDTPLSPGQLEGIEKMLRTMMPWRKGPFSLYGIDIDTEWHSDWKWDRVLPHISPLAGRTILDVGCGSGYHLWRMLGAGAQLAVGIDPMQLFLCQFEAVRKLLGGDQRAHLLPLGIEQLPELAAFDTVFSMGVLYHRRSPLDHLYQLKNQLVSEGELVLETLVIEGDRNQVLVPGDRYAQMRNVYFIPSAEALKCWLEKCGFVDVKIADMCVTSTEEQRRTDWMTSESLAEFLDPNDPGKTIEGYPSPLRAVLVARKP

Annotated regions:
Protein sequence:
MESGKSPLEENLQEFTLKEDSELRFEVANGDVMLELVDGRAEVFGTELIQHKKYVFPAGSRVAVFTWKKAVVELVGKTESAYVAEQTPMIIYLNTHAALEQLREHAESVVMQQEQARGPSLMIVGPTDVGKTTVCRILCNYAVRVGRTPIFVDLDVGQGSISVPGTVGALYIEKTADVVEGFDKKAPLVYHFGNLSPGSNIPLYDLLVKQLAEAISKRRKSSQDATYGGVIINTCGWVKGEGYACLVNAAEEFEVDVVIVLDHERLYNELQRDLPSFVKILHQPKSGGVENRSKEVRISSRNAFVHKYFYGTRAMPLYPHTFELSFDEVQFCKIGCERLPIECLPFGMKVDDHRTKVVPIEPSEDLVHHLVSLSMCTAVDQSVLTTNVMGFIVITAVDMEREKLTVLSPQPYPLPSKILILSEVTFIDDKERT

Annotated regions:
phrase: LYPHTFELSFDEVQFCKIGCERLPIECLPFGMKVDDHRTKVVPIEPSEDLVHHLVSLSMCTAVDQSVLTTNVMGFIVITAVDMEREKLTVLSPQPYPLPSKILILSEVTFI
type: DOMAIN
name: Clp1_C
description: Pre-mRNA cleavage complex subunit Clp1, C-terminal

phrase: TLKEDSELRFEVANGDVMLELVDGRAEVFGTELIQHKKYVFPAGSRVAVFTWKKAVVELVGKTESAYVAEQTPMIIYLNTHAALEQLREH
type: DOMAIN
name: Clp1_N
description: Clp1, N-terminal beta-sandwich domain

phrase: GPTDVGKTTVCRILCNYAVRVGRTPIFVDLDVGQGSISVPGTVGALYIEKTADVVEGFDKKAPLVYHFGNLSPGSNIPLYDLLVKQLAEAISKRRKSSQDATYGGVIINTCGWVKGEGYACLVNAAEEFEVDVVIVLDHERLYNELQRDLPSFVKILHQPKSGGVENRSKEVRISSRNAFVHKYFY
type: DOMAIN
name: CLP1_P
description: Polyribonucleotide 5'-hydroxyl-kinase Clp1, P-loop domain
Protein sequence:
MAAPARRLCHIAFHVPAGQPLARDLQRIFGFQPLAVREAGGWRQLALRSGDAVFLVNEGTGPREPLYGLDPHHSVPSATNLCFDVEDVDRAARALAARGCIMPVPPTRVRDAQGTATYTVVSSPAGNLSLTLLQRAGYRGSFLPGFRPLPCTPGPGWVSHVDHLTLACTSGSSPTLMRWFHNCLGFHHLPLSPGEDPELGLKVAVGSGRGGLRLTALQTLPNSTVPTLVLAESLPGLTSEQDQVEQFLTRHGGPGLQHVGLYTPNIIDASEGMAKAGGRLLTPPEAYYQQPGKEEQILASGHKPSFLERQGILLDGDKDEFLLQVFTKSLFDEDTFFLELIERQGATGFGQNNIRALWQSVQEEAARAQGT

Annotated regions:
phrase: HVDHLTLACTSGSSPTLMRWFHNCLGFHHLPLSPGEDPELGLKVAVGSGRGGLRLTALQTLPNSTVPTLVLAESLPGLTSEQDQVEQFLTRHGGPGLQHVGLYTPNIIDASEGMAKAGGRLLTPPEAYYQQPGKEEQILASGHKPSFLERQGILLDGDKDEFLLQVFT
type: DOMAIN
name: VOC
description: Vicinal oxygen chelate (VOC) domain

phrase: RLCHIAFHVPAGQPLARDLQRIFGFQPLAVREAGGWRQLALRSGDAVFLVNEGTGPREPLYGLDPHHSVPSATNLCFDVEDVDRAARALAARGCIMPVPPTRVRDAQGTATYTVVSSPAGNLSLTLLQ
type: DOMAIN
name: VOC
description: Vicinal oxygen chelate (VOC) domain

phrase: VSHVDHLTLACTSGSSPTLMRWFHNCLGFHHLPLSPGEDPELGLKVAVGSGRGGLRLTALQTLPNSTVPTLVLAESLPGLTSEQDQVEQFLTRHGGPGLQHVGLYTPNIIDASEGMAKAGGRLLTPPEAYYQQPGKEEQILASGHKPSFLERQGILLDGDKDEFLLQVFTKSLFDEDTFFLELIERQGATGFGQNNIRALWQSVQ
type: DOMAIN
name: 4OHPhenylPyrv_dOase_C
description: 4-hydroxyphenylpyruvate dioxygenase, C-terminal

phrase: CHIAFHVPAGQPLARDLQRIFGFQPLAVREAGGWRQLALRSGDAVFLVNEGTGPREPLYGLDPHHSVPSATNLCFDVEDVDRAARALAARGCIMPVPPTRVRDAQGTATYTVVSSPAGNLSLTLLQRAGYRGSFLPGFR
type: DOMAIN
name: 4OHPhenylPyrv_dOase_N
description: 4-hydroxyphenylpyruvate dioxygenase, N-terminal
Protein sequence:
MLQQESRIRVADNSGAKEVLLIRVLGGKKYAYIGDTIIVSIKEAIAGSSVKKGQLYKAVVVRTKKKIRRKDGSYIRFDDNACVLLTNTGEMKGTRILGPVSRELRDKEYTKIVSLATEVL

Annotated regions:
phrase: AVVVRTKKKIRRKDGSYIRFDDNACV
type: CONSERVED_SITE
name: Ribosomal_uL14_CS
description: Large ribosomal subunit protein uL14, conserved site
Protein sequence:
MKVTLPDFRRAGVLVVGDVMLDRYWYGPTCRISPEAPVPVVKVDTIEERPGGAANVAMNIASLGAVARLVGLTGIDDAARALICKLSEVRVRCDFVSVPTHPTITKLRVLSRNQQLIRLDFEEGFDGVDPTPIFERIQLALPQIGALVLSDYAKGALNSVQPMIQLARKANVPVLIDPKGSDFERYRGATLLTPNLSEFEAVVGRCKNEEELVNRGMQLVADFELSALLVTRSEQGMTLLQLGKPPLHLPTQAKEVFDVTGAGDTVIGVLAAALAAGNSLEESCFLANAAAGVVVGKLGTSTVSPIELENAIRGRAETGFGVMDEQQLKIAVAQARQRGEKVVMTNGIFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGEKRPVNPLEQRMVVLGALEAVDWVVPFEEDTPQRLIADILPDLLVKGGDYKPHEIAGSEEVWAAGGEVKVLNFEDGVSTTNIIQSIKNGRG

Annotated regions:
phrase: VLVVGDVMLDRYWYGPTCRISPEAPVPVVKVDTIEERPGGAANVAMNIASLGAVARLVGLTGIDDAARALICKLSEVRVRCDFVSVPTHPTITKLRVLSRNQQLIRLDFEEGFDGVDPTPIFERIQLALPQIGALVLSDYAKGALNSVQPMIQLARKANVPVLIDPKGSDFERYRGATLLTPNLSEFEAVVGRCKNEEELVNRGMQLVADFELSALLVTRSEQGMTLLQLGKPPLHLPTQAKEVFDVTGAGDTVIGVLAAALAAGNSLEESCFLANAAAGVVVGKLGTSTVSPIEL
type: DOMAIN
name: RfaE_dom_I
description: RfaE bifunctional protein, domain I

phrase: GGAANVAMNIASLGAVARLVGLT
type: CONSERVED_SITE
name: Carboh/pur_kinase_PfkB_CS
description: Carbohydrate/purine kinase, PfkB, conserved site

phrase: VVMTNGIFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGEKRPVNPLEQRMVVLGALEAVD
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: MTNGIFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGEKRPVNPLEQRMVVLGALEAVDWVVPFEEDTPQRLIADILPDLLVKGGDYKPHEIAGSEEVWAAGGEVKVLNFEDGVSTTNII
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: VLVVGDVMLDRYWYGPTCRISPEAPVPVVKVDTIEERPGGAANVAMNIASLGAVARLVGLTGIDDAARALICKLSEVRVRCDFVSVPTHPTITKLRVLSRNQQLIRLDFEEGFDGVDPTPIFERIQLALPQIGALVLSDYAKGALNSVQPMIQLARKANVPVLIDPKGSDFERYRGATLLTPNLSEFEAVVGRCKNEEELVNRGMQLVADFELSALLVTRSEQGMTLLQLGKPPLHLPTQAKEVFDVTGAGDTVIGVLAAALAAGNSLEESCFLANAAAGVVVGKLGTSTVS
type: DOMAIN
name: PfkB_dom
description: Carbohydrate kinase PfkB

phrase: PDFRRAGVLVVGDVMLDRYWYGPTCRISPEAPVPVVKVDTIEERPGGAANVAMNIASLGAVARLVGLTGIDDAARALICKLSEVRVRCDFVSVPTHPTITKLRVLSRNQQLIRLDFEEGFDGVDPTPIFERIQLALPQIGALVLSDYAKGALNSVQPMIQLARKANVPVLIDPKGSDFERYRGATLLTPNLSEFEAVVGRCKNEEELVNRGMQLVADFELSALLVTRSEQGMTLLQLGKPPLHLPTQAKEVFDVTGAGDTVIGVLAAALAAGNSLEESCFLANAAAGVVVGKLGTSTVSPIELENA
type: DOMAIN
name: RfaE_dom_I
description: RfaE bifunctional protein, domain I

phrase: VAQARQRGEKVVMTNGIFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGEKRPVNPLEQRMVVLGALEAVDWVVPFEEDTPQRLIADILPDLLVKGGDYKPHEIAGSEEVWAAGGEVKVLNFEDGVSTTNIIQSI
type: DOMAIN
name: RfaE_dom_II
description: RfaE bifunctional protein, domain II
Protein sequence:
MAVSSAVRMLSVACLVVSAAGMRRLGDCSSSADCGPGACCTIGFNRYSIPQCTPLGDLGDWCRVMNPPRELSLAYPNGLQVLLTDSYHGMCPCRPELACSRATSTCQLPQESTQHQEDNSLYKD

Annotated regions:
phrase: ACLVVSAAGMRRLGDCSSSADCGPGACCTIGFNRYSIPQCTPLGDLGDWCRVMNPPRELSLAYPNGLQVLLTDSYHGMCPCRPELACSRA
type: DOMAIN
name: Prokineticin_domain
description: Prokineticin domain
Protein sequence:
MSQRKYFGTDGIRGHVGLSNINPEFVLKLGWAVGCVLANGARKKVVIGKDTRVSGYMLESALEAGLSAAGVDVALLGPMPTPGIAYLTQTLRANAGIVISASHNLFEDNGIKFFSADGGKLPDSVELAIEAQLEKQLQTVPSAKLGKATRINDAAGRYIEFCKSTIPSLSRLSNLKIVVDCANGATYHIAPNVFSELGADVVPIGIKPDGFNINQECGSTAPELLREKVIAVGADIGIGLDGDGDRVILVDSLGNLVDGDQIIYIIAKDRHQRGVLHGGVVGTLMSNYGLELAITSLGVPFQRSKVGDRYVLETLREKDWKIGGETSGHIVCLDKTTTGDGIVAALQVLSIMVKQNKALHELTAGIQLLPQTLVNLKTNNAALLASNPDVIQAVKNLEKHLNGEGRVLLRPSGTEPLLRVMVEGANASIVKQQAQMLCDDISQIDKKMTESLPST

Annotated regions:
phrase: LVNLKTNNAALLASNPDVIQAVKNLEKHLNGEGRVLLRPSGTEPLLRVMVEGANASIVKQQAQMLC
type: DOMAIN
name: A-D-PHexomutase_C
description: Alpha-D-phosphohexomutase, C-terminal

phrase: RKYFGTDGIRGHVGLSNINPEFVLKLGWAVGCVLANGARKKVVIGKDTRVSGYMLESALEAGLSAAGVDVALLGPMPTPGIAYLTQTLRANAGIVISASHNLFEDNGIKFFSADGGKLPDSVELAIEAQLEKQ
type: DOMAIN
name: A-D-PHexomutase_a/b/a-I
description: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I

phrase: DGDQIIYIIAKDRHQRGVLHGGVVGTLMSNYGLELAITSLGVPFQRSKVGDRYVLETLREKDWKIGGETSGHIVCLDKTTTGDGIVAALQVLSIMVKQNKALHEL
type: DOMAIN
name: A-D-PHexomutase_a/b/a-III
description: Alpha-D-phosphohexomutase, alpha/beta/alpha domain III

phrase: RYIEFCKSTIPSLSRLSNLKIVVDCANGATYHIAPNVFSELGADVVPIGIKPDGFNINQECGSTAPELLREKVIAVGADIGIGLDGDGDRVILVDS
type: DOMAIN
name: A-D-PHexomutase_a/b/a-II
description: Alpha-D-phosphohexomutase, alpha/beta/alpha domain II
Protein sequence:
MVVVAILAAGRGTRMKSRLPKVLHSLGGQSLVERVIESVEPLSPSRRIVIVGYQSEEVQTAMHSIPNLEFVEQTVQLGTGHAIQQLLPHLKDYTGDLLILNGDLPLIRSETLKQMLQTHAQNQNAATILTSHLPDPTGYGRVFCNNENIVQQMVEHKDCTAAQRQNQRINAGVYCFRWPDLAKVLPHLQANNAQKEYYLTDAVTQVGQVMAVDVEDNQEILGINDRLQLATAYEILQKRVKEKWMLAGVTLIDPASITIDETVELQPDVIIEPQTHLRGNTVIQTGSHIGPGSLIENSQLAENVTVQYSVVIDSTIQAGSRIGPYAHLRGHVQVGAGCRVGNFVELKNTQLGDRTNAAHLSYIGDTVVGNQVNIGAGTITANYDGVKKHRTKIGDRTKTGANSVLVAPLTLGDDVYIAAGSTVTEDVPNDSLVIARSRQVVKPAWQRKSVENKTTDQHK

Annotated regions:
phrase: TKIGDRTKTGANSVLVAPLTLGDDVYIAAGSTV
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: DSTIQAGSRIGPYAHLRGHVQVGAGCRVGNFVEL
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: AILAAGRGTRMKSRLPKVLHSLGGQSLVERVIESVEPLSPSRRIVIVGYQSEEVQTAMHSIPNLEFVEQTVQLGTGHAIQQLLPHLKDYTGDLLILNGDLPLIRSETLKQMLQTHAQNQNAATILT
type: DOMAIN
name: MobA-like_NTP_Trfase
description: MobA-like NTP transferase

phrase: GVTLIDPASITIDETVELQPDVIIEPQTHLRGNTVIQTGSHIGPGSLIENSQLAENVTVQYSVVIDSTIQAGSRIGPYAHLRGHVQVGAGCRVGNFVELKNTQLGDRTNAAHLSYIGDTVVGNQVNIGAGTITANYDGVKKHRTKIGDRTKTGANSVLVAPLTLGDDVYIAAGSTVTEDVPNDSLVIARSR
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain
Protein sequence:
DKNTYKVSGGLHGVGVSCVNALSTVLHVTVHREGKIFEQEYHRGVPQYAVREIGATTDTGTTTHFKPDGEIFTETSYNREILAGRLRELAYLNRKIRITLTDEREKDEQGNVLSEPFYSEGGIMEFVQMLDRNGRRNSLLPAPIFIEAHDAPSNVAVEVSLQYNDSFSENIFSYVNNINTIEGGTHVAGFRRAITRVFKTYGDRNKLFEKSKIEVTGDDFREGLSAIVSVKVPEPQFEGQTKTKLGNSDVMGVVDSAVADVLNAYLEEHPKEARTVINKVVLAAQAREAARKARQLVQRKSVLTGSGLPGKLADCSENDPEKCELYLVEGDSAGGTAKQGRNRAFQAILPLRGKILNVEKAMEHKIYENEEIKNIFTALGVTIGTEEDDKALNLSKLRYHKLIIMTDADVDGSHIATLILTFVFRYMKALVEQGYVYIAQPPLYLVKKGKEQIYAWTEEQRKAAVATLAGGKEDSVTIQRY

Annotated regions:
phrase: CELYLVEGDSAGGTAKQGRNRAFQAILPLRGKILNVEKAMEHKIYENEEIKNIFTALGVTIGTEEDDKALNLSKLRYHKLIIMTDADVDGSHIATLILTFVFRYMKALVEQGYVYIAQ
type: DOMAIN
name: TOPRIM_GyrB
description: DNA gyrase subunit B, TOPRIM domain

phrase: ELYLVEGDSAGGTAKQGRNRAFQAILPLRGKILNVEKAMEHKIYENEEIKNIFTALGVTIGTEEDDKALNLSKLRYHKLIIMTDADVDGSHIATLILTFVFRYMKALVEQGYVYIA
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: CELYLVEGDSAGGTAKQGRNRAFQAILPLRGKILNVEKAMEHKIYENEEIKNIFTALGVTIGTEEDDKALNLSKLRYHKLIIMTDADVDGSHIATLILTFVFRYMKALVEQGYVYIAQP
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: GIMEFVQMLDRNGRRNSLLPAPIFIEAHDAPSNVAVEVSLQYNDSFSENIFSYVNNINTIEGGTHVAGFRRAITRVFKTYGDRNKLFEKSKIEVTGDDFREGLSAIVSVKVPEPQFEGQTKTKLGNSDVMGVVDSAVADVLNAYLEEHPKEARTVINKVVLAAQAREAARKAR
type: DOMAIN
name: Topo_IIA_bsu_dom2
description: DNA topoisomerase, type IIA, subunit B, domain 2

phrase: LVEGDSAG
type: CONSERVED_SITE
name: TopoIIA_CS
description: DNA topoisomerase, type IIA, conserved site
Protein sequence:
MIKLTARQQQVFDLIRRAIERSGFPPTRAEIAAELGFSSPNAAEEHLRALARKGVIELAAGASRGIRLLGIDDAPHQLTLPHAALMQLSLPLVGRVAAGSPILAQEHISQHYACDPALFSSKPDYLLKVRGLSMRDAGILDGDLLAVQKRTEAKDGQIIVARLGDDVTVKRLKRRPGGVELIAENPDYENIFVKAGSAEFALEGIAVGLIRPGEF

Annotated regions:
phrase: MIKLTARQQQVFDLIRRAIERSGFPPTRAEIAAELGFSSPNAAEEHLRALARKGVIELAAGASR
type: DOMAIN
name: LexA_DNA-bd_dom
description: LexA repressor, DNA-binding domain

phrase: YLLKVRGLSMRDAGILDGDLLAVQKRTEAKDGQIIVARLGDDVTVKRLKRRPGGVELIAENPDYENIFVKAGSA
type: DOMAIN
name: LexA-like
description: LexA-like

phrase: PLVGRVAAGSPILAQEHISQHYACDPALFSSKPDYLLKVRGLSMRDAGILDGDLLAVQKRTEAKDGQIIVARLGDDVTVKRLKRRPGGVELIAENPDYENIFVKAGSAEFALEGI
type: DOMAIN
name: Peptidase_S24_S26A/B/C
description: Peptidase S24/S26A/S26B/S26C
Protein sequence:
MGSRTDPWSARLAKAAEQRHADGGWRQRPTLSDVAPFIDFAGNDYLGLADDPRLAEAQAEAARRLGAGAKASHLVSGHLEIHERLERRLAQLTGRPRALLFSTGYMANLGVLQALCDHHTRVFQDRLNHASLIDGARLAGATSRRFHHRDLEDLERLLARAPDDAPTLVVSDGVFSMDGDVAEVGALAATARRHGAWLMIDDAHGLGVLGEVGDGCVGRAHDRREVPVLVGTLGKALGSAGAFVAGDEALIDHLIQFARPYVYTTAQPPGVAAATLTALDVLEREPERRARLHERSADFRREAGTLGLPLTDSRTPIQPIVLGDNARVMRWAERLARAGLRVGAIRAPTVPKGEARLRITLSATHDDDALDALLEGLATCQREEAA

Annotated regions:
phrase: FIDFAGNDYLGLADDPRLAEAQAEAARRLGAGAKASHLVSGHLEIHERLERRLAQLTGRPRALLFSTGYMANLGVLQALCDHHTRVFQDRLNHASLIDGARLAGATSRRFHHRDLEDLERLLARAPDDAPTLVVSDGVFSMDGDVAEVGALAATARRHGAWLMIDDAHGLGVLGEVGDGCVGRAHDRREVPVLVGTLGKALGSAGAFVAGDEALIDHLIQFARPYVYTTAQPPGVAAATLTALDVLEREPERRARLHERSADFRREAGTLGLPLTDSRTPIQPIVLGDNARVMRWAERLARAGLRVGAIRAPTVPKGEARLRITLSATHDDDALDALLE
type: DOMAIN
name: Aminotransferase_I/II_large
description: Aminotransferase, class I/classII, large domain

phrase: TLGKALGSA
type: BINDING_SITE
name: Aminotrans_II_pyridoxalP_BS
description: Aminotransferase, class-II, pyridoxal-phosphate binding site
Protein sequence:
MRQALLERFLRYIKIDTQSDGKNLESPSTPSQFEFAKLLKLELEELGFHRVELSDKGYLSASVPKTIEGVPCIGFIAHLDTAPDFSGANVTPQLINDYDGSEIKLGEDEVLSPELFPHMLKYLGKTLITTDGTSLLGGDDKAGISEIITALHYLLEHPEIPHGEIRLCFTPDEEIGRGADHFDVPEFGAQWAYTIDGGQLGELEFENFNAATAVITAKGNNCHPGTAYGVMVNAQTMAARFHAKMPLHDTPEGSKDYDGFFHLINMQGQTEEAELTYIIRDFDLELFEKRKTWLTERVKSYNADLVLGSLEIEITDSYFNMKEQILPYPHIIDIAEKAITNQGVTPLIKPIRGGTDGSRLSYMGLPCPNIFTGGHNFHGKHEYICLESMEKAVDVIIDICKLTAEEQQA

Annotated regions:
phrase: IGFIAHLDT
type: CONSERVED_SITE
name: ArgE/DapE_CS
description: ArgE/DapE/ACY1/CPG2/YscS, conserved site

phrase: ENFNAATAVITAKGNNCHPGTAYGVMVNAQTMAARFHAKMPLHDTPEGSKDYDGFFHLINMQGQTEEAELTYIIRDFDLELFEKRKTWLTERVK
type: DOMAIN
name: Peptidase_M20_dimer
description: Peptidase M20, dimerisation domain
Protein sequence:
MGNLKSVGQEPGPPCGLGLGLGLGLCSKQSGSPGPENGGPAVADVSPPVARPPEGPKFSRIKNWEVGSITYDTLSAQAQQDGPCTPRRCLGSLVFPKQLQSRPTEGPPSPGQLLIQARDFINQYYSSIKRSGSPAHGQRLREVEAEVAATGTYQLRESELVFGAKQAWRNAPRCVGRIQWGKLQVFDARDCSSAQEMFTYICNHIKYATNKGNLRSAITVFPQRSQGKGDFRIWNSQLIRYAGYRQQDGSVLGDPANVEITELCIQHGWTPKNGRFDVLPLLLQASDEPPELFPLPPELVLEVPLQHPTLEWFESLGLRWYALPAVSNMLLEIGGLEFPAVPFSGWYMSSEIGMRNLCDPHRYNILEDVAVCMDLDTRTTSSLWKDKAAVEINLAVLHSYQLAKVTIVDHHAATASFMKHLENEQRARGGCPADWVWIVPPISGSLTPVFHQEMVNYFLSPAFHYQPDPWKGTATKGTGITRKKTFKEVANAVKISASLMGTVMAKRVKATILYGSETGRAQSYAQQLGRLFRKAFDPRVLCMDEYDVVSLEHETLVLVVTSTFGNGDPPENGERFAAALMEMSGPYNSSPRPEQHKSYKIRFNSVSCSDTLVSSWRRKRKESSNTDSAGALGTLRFCVFGLGSRAYPHFCAFARAVDTRLEELGGERLLQLGQGDELCGQEEAFQGWAQAAFQASCETFCVGDDAKAAARDIFSPKRSWKRQRYRLSAQPEGLQLLPGLIHVHRRKMFPATVLSVENLQSSKSTRAT

Annotated regions:
phrase: LVVTSTFGNGD
type: DOMAIN
name: Flavdoxin-like
description: Flavodoxin-like

phrase: DTRLEELGGERLLQLGQGD
type: DOMAIN
name: Flavdoxin-like
description: Flavodoxin-like

phrase: TILYGSETGRAQS
type: DOMAIN
name: Flavdoxin-like
description: Flavodoxin-like

phrase: TLRFCVFGLG
type: DOMAIN
name: Flavdoxin-like
description: Flavodoxin-like

phrase: QLLIQARDFINQYYSSIKRSGSPAHGQRLREVEAEVAATGTYQLRESELVFGAKQAWRNAPRCVGRIQWGKLQVFDARDCSSAQEMFTYICNHIKYATNKGNLRSAITVFPQRSQGKGDFRIWNSQLIRYAGYRQQDGSVLGDPANVEITELCIQHGWTPKNGRFDVLPLLLQASDEPPELFPLPPELVLEVPLQHPTLEWFESLGLRWYALPAVSNMLLEIGGLEFPAVPFSGWYMSSEIGMRNLCDPHRYNILEDVAVCMDLDTRTTSSLWKDKAAVEINLAVLHSYQLAKVTIVDHHAATASFMKHLENEQRARGGCPADWVWIVPPISGSLTPVFHQEMVNYFLSPAFHYQPDPW
type: DOMAIN
name: NOS_N
description: Nitric oxide synthase, N-terminal

phrase: ILYGSETGRAQSYAQQLGRLFRKAFDPRVLCMDEYDVVSLEHETLVLVVTSTFGNGDPPENGERFAAALMEMSGPYNSSPRPEQHKSYKIRFNSVSCSDTLVSSWRRKRKESSNTDSAGALGTLRFCVFGLGSRAYPHFCAFARAVDTRLEELGGERLLQLGQGDELCGQEEAFQG
type: DOMAIN
name: Flavodoxin/NO_synth
description: Flavodoxin/nitric oxide synthase

phrase: ATILYGSETGRAQSYAQQLGRLFRKAFDPRVLCMDEYDVVSLEHETLVLVVTSTFGNGDPPENGERFAAALMEMSGPYNSSPRPEQHKSYKIRFNSVSCSDTLVSSWRRKRKESSNTDSAGALGTLRFCVFGLGSRAYPHFCAFARAVDTRLEELGGERLLQLGQGDELCGQEEAFQGWAQAA
type: DOMAIN
name: Flavodoxin/NO_synth
description: Flavodoxin/nitric oxide synthase

phrase: RCVGRIQ
type: DOMAIN
name: NOS_N
description: Nitric oxide synthase, N-terminal
Protein sequence:
MLERNDLWNLIKFSMEQDLSKITFQTFVEPAKPLQLDKAQMTIEVPTQLHRDYWEKNLAAKFTDIAMQATNEQIRPVMITEEERQQLTRDKDSQVTTGNVAGQQPTTATTPTFMRETKLNPKYTFDTFVIGKGNQMAHAAALVVSEEPGTMYNPLFFYGGVGLGKTHLMHAIGNKLLETDPTSNIKYVTSESFTNELINAIQTKKQEAFREEYRNVDLLLVDDIQFFANKEATQEEFFHTFNALYEDDKQIVLTSDRLPNEIPQLQDRLVSRFKWGLSVDITPPDLETRIAILRNKADLEGIEIPDDTLSYIAGQIDSNVRELEGALARVQAYSRLNNSPITTSLVADALKSLHLSSKLSEVSIPVIQEKVAKYFHVTMADLKGKKRNKQIVIPRQIAMYLSRELTESSLPRIGNEFGGKDHTTVIHAHDKITKALKTDAELQKAVGDLTGQLKS

Annotated regions:
phrase: VIQEKVAKYFHVTMADLKGKKRNKQIVIPRQIAMYLSRELTESSLPRIGNEFGGKDHTTVIHAHDK
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: MYNPLFFYGGVGLGKTHLMHAIGNKLLETDPTSNIKYVTSESFTNELINAIQTKKQEAFREEYRNVDLLLVDDIQFFANKEATQEEFFHTFNALYEDDKQIVLTSDRLPNEIPQLQDRLVSRFKWGLSVDI
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: IGNEFGGKDHTTVIHAHDK
type: CONSERVED_SITE
name: Chromosome_initiator_DnaA_CS
description: Chromosomal replication control, initiator DnaA, conserved site

phrase: SIPVIQEKVAKYFHVTMADLKGKKRNKQIVIPRQIAMYLSRELTESSLPRIGNEFGGKDHTTVIHAHDK
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: LNPKYTFDTFVIGKGNQMAHAAALVVSEEPGTMYNPLFFYGGVGLGKTHLMHAIGNKLLETDPTSNIKYVTSESFTNELINAIQTKKQEAFREEYRNVDLLLVDDIQFFANKEATQEEFFHTFNALYEDDKQIVLTSDRLPNEIPQLQDRLVSRFKWGLSV
type: DOMAIN
name: DnaA_dom
description: Chromosomal replication initiator protein DnaA, ATPAse domain

phrase: DLWNLIKFSMEQDLSKITFQTFVEPAKPLQLDKAQMTIEVPTQLHRDYWEKNLAAKFTD
type: DOMAIN
name: DnaA_N_dom
description: DnaA N-terminal domain

phrase: IQEKVAKYFHVTMADLKGKKRNKQIVIPRQIAMYLSRELTESSLPRIGNEFGGKDHTTVIHAHDKITKALKTDAELQKAVGDLTGQ
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal
Protein sequence:
MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVENKVTEEGFLVVMLSKSKSGGSAGQASVQTSSVSQPVSATTSSTKPAAPSTTQSSPVPASPIPAQEQPAAQTDTYGQAASTLVSGSSLEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAVDYLYSGIPQTAEVAVPVPEAQIAGSGAAPVAPASGGPNSSPLDLFPQETVAAAGSGDLGTLEFLRNNDQFQQLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLVNEPYEGSDGEGDMFDQPEQEMPHAINVTPAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLENSGDFED

Annotated regions:
phrase: MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVENKVTEEGFLVVML
type: DOMAIN
name: Ubiquitin-like_dom
description: Ubiquitin-like domain

phrase: GTLEFLRNNDQFQQLRTMVHSNPQILQPMLQELGKQNPQLLRL
type: DOMAIN
name: STI1_HS-bd
description: Heat shock chaperonin-binding

phrase: EQEAIQRLEAMGFDRALVIEAFLACDRNEELAANY
type: DOMAIN
name: UBA
description: Ubiquitin-associated domain

phrase: LEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAVDY
type: DOMAIN
name: UBA
description: Ubiquitin-associated domain

phrase: PAEQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLLE
type: DOMAIN
name: UBA
description: Ubiquitin-associated domain

phrase: LTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVENKVTEEGFLVVMLS
type: DOMAIN
name: Ubiquitin-like_dom
description: Ubiquitin-like domain

phrase: MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLVENKVTEEGFLVVMLSKSK
type: DOMAIN
name: Ubiquitin-like_dom
description: Ubiquitin-like domain

phrase: EQEAIQRLEAMGFDRALVIEAFLACDRNEELAANYLL
type: DOMAIN
name: UBA
description: Ubiquitin-associated domain

phrase: LEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAVDYLY
type: DOMAIN
name: UBA
description: Ubiquitin-associated domain

phrase: SSLEQMVQQIMEMGGGSWDKETVTRALRAAYNNPERAVDYLYS
type: DOMAIN
name: UBA
description: Ubiquitin-associated domain

phrase: LEFLRNNDQFQQLRTMVHSNPQILQPMLQELGKQNPQLLRLIQENQAEFLQLVNE
type: DOMAIN
name: XPC-bd
description: XPC-binding domain
Protein sequence:
MGPDRKEVPLSRGTQAVVVGKGRGAPGDDSSMGGRPSSPLDKQQRQHLRGQVDTLLRNFLPCYRGQLAASVLRQISRELGPQEPTGSQLLRSKKLPRVREHRGPLTQLRGHPPRWQPIFCVLRGDGRLEWFSHKEEYENGGHCLGSTALTGYTLLTSQREYLRLLDALCPESLGDHTQEEPDSLLEVPVSFPLFLQHPFRRHLCFSAATREAQHAWRLALQGGIRLQGIVLQRSQAPAARAFLDAVRLYRQHQGHFGDDDVTLGSDAEVLTAVLMREQLPALRAQTLPGLRGAGRARAWAWTELLDAVHAAVLAGASAGLCAFQPEKDELLASLEKTIRPDVDQLLRQRARVAGRLRTDIRGPLESCLRREVDPQLPRVVQTLLRTVEASLEAVRTLLAQGMDRLSHRLRQSPSGTRLRREVYSFGEMPWDLALMQTCYREAERSRGRLGQLAAPFGFLGMQSLVFGAQDLAQQLMADAVATFLQLADQCLTTALNCDQAAQRLERVRGRVLKKFKSDSGLAQRRFIRGWGLCIFLPFVLSQLEPGCKKELPEFEGDVLAVGSQALTTEGIYEDVIRGCLLQRIDQELKKTLGANDVSCTLDGCLEVPWEQEGAAPNLNLVSSFLAGRQAFTDFLCLPAKSSANWILAASLLSCSCFRSGFHRDSRVFLVQLAEGLSHSLETVSSHSVWSFRPTPRQ

Annotated regions:
phrase: REHRGPLTQLRGHPPRWQPIFCVLRGDGRLEWFSHKEEYENGGHCLGSTALTGYTLLTSQREYLRLLDALCPESLGDHTQEEPDSLLEVPVSFPLFLQHPFRRHLCFSAATREAQHAWRLALQGGIRL
type: DOMAIN
name: PH_domain
description: Pleckstrin homology domain
Protein sequence:
MLVISANEQRKLVNMNEVIAYAALALQEFSAERTITPIRTSLPFANEQNTALIMPSVAEGLEALGLKVVTVVPENKKIGKKTINGIVMLSDFQTGEPLALLEGSYLTMIRTGALSGVATKHLARHNAKTLCIIGTGEQAKGIAEAVFAVRDIEKVMLYNRTEEKAYAFAQYIQEKFGKPAYVYANANEAISEADIIVTTTNASTPVFSEKLQKGVHINAVGSFRPNMQELPSHAIANANKVVVESKEAALEETGDLQVPVREGLFEASDIHAELGQIISGEKAGRESDEEITVFKSVGLAVVDIIVAKYLYEKAVERGVGERIEF

Annotated regions:
Protein sequence:
MESLSELQNPLLPRSPAHLHGPYPYPETPPSWSCQEKLYSYLLGGAGPAGAHQLLDPGSLQLAVEAWYRPSCLLGRDKVKEPRAGSCETSFTEDREPQEGPPEQPTGPGQAAENVTIQTVSYGVQEELRDQEDDQEEEESDATSTESESEDNFLTLPPRDHLGLTLFSMLCCFWPLGIAAFYFSQGTSKAISKGDFRLASTTSRRALFLATLAIAVGAGLYVAVVVALAAYMSQNGHG

Annotated regions: