nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MLRFTNCSCKTFVKSSYKLNIRRMNSSFRTETDAFGEIHVPADKYWGAQTQRSFQNFKIGGARERMPLPLVHAFGVLKKSAAIVNESLGGLDPKISKAIQQAADEVASGKLDDHFPLVVFQTGSGTQSNMNANEVISNRAIEILGGKIGSKQVHPNNHCNQSQSSNDTFPTVMHIAASLQIQNELIPELTNLKNALEAKSKEFDHIVKIGRTHLQDATPLTLGQEFSGYVQQVENGIQRVAHSLKTLSFLAQGGTAVGTGLNTKPGFDVKIAEQISKETGLKFQTAPNKFEALAAHDAIVECSGALNTLACSLFKIAQDIRYLGSGPRCGYHELMLPENEPGSSIMPGKVNPTQNEALTQVCVQVMGNNAAITFAGSQGQFELNVFKPVMIANLLNSIRLITDAAYSFRVHCVEGIKANEPRIHELLTKSLMLVTALNPKIGYDAASKVAKNAHKKGITLKESALELGVLTEKEFDEWVVPEHMLGPK

Annotated regions:
phrase: LVTALNPKIGYDAASKVAKNAHKKGITLKESALELGVLTEKEFDEWVVPEHM
type: DOMAIN
name: Fumarase_C_C
description: Fumarase C, C-terminal

phrase: GEIHVPADKYWGAQTQRSFQNFKIGGARERMPLPLVHAFGVLKKSAAIVNESLGGLDPKISKAIQQAADEVASGKLDDHFPLVVFQTGSGTQSNMNANEVISNRAIEILGGKIGSKQVHPNNHCNQSQSSNDTFPTVMHIAASLQIQNELIPELTNLKNALEAKSKEFDHIVKIGRTHLQDATPLTLGQEFSGYVQQVENGIQRVAHSLKTLSFLAQGGTAVGTGLNTKPGFDVKIAEQISKETGLKFQTAPNKFEALAAHDAIVECSGALNTLACSLFKIAQDIRYLGSGPRCGYHELMLPENEPGSSIMPGKVNPTQNEALTQVCVQVM
type: DOMAIN
name: Fumarate_lyase_N
description: Fumarate lyase, N-terminal

phrase: GSSIMPGKV
type: CONSERVED_SITE
name: Fumarate_lyase_CS
description: Fumarate lyase, conserved site
Protein sequence:
MSTKLEQLRALTTVVADTGDIEAISKYQPEDATTNPSLILKAAQIAEYAPLIDASIAYAKAQSNDKTQQVADTCDMLAVNIGKEILKVVPGRISTEVDARLSYDTEGSVIKARQLIKMYNDAGITNDRILIKLASTWEGIRAAEVLEKEGINCNLTLLFSFAQARACAEAGVFLISPFVGRIMDWYKAKEGRDFESSEDPGVVSVTGIYDYYKTYGYNTVVMGASFRNIGEILELAGCDRLTISPNLLQELEDATGEVVEKLIDTNGTKERPAAMTHAEFLWEHNQDPMAVEKLADGIRNFAVDQGKLEVMIAERL

Annotated regions:
phrase: DATTNPSL
type: ACTIVE_SITE
name: Transaldolase_AS
description: Transaldolase, active site

phrase: ILIKLASTWEGIRAAEV
type: ACTIVE_SITE
name: Transaldolase_AS
description: Transaldolase, active site
Protein sequence:
MAISPEEILHIAYEELVEIEPMTSIPELRLLERTYPPLMPLDIARIPLYAALLLKKSNMCKIRLPSYLQLESLKMSMDVEIEKADEYSCIHPYFFPLATELLENCYNVESIEESKMIVEKIKEIRLAKTLKGIKCLDGKALNMNNITLFEFNEIKELILGSAEVGRRIEDLAKDQ

Annotated regions:
phrase: LQLESLKMSMDVEIEKADEYSCIHPYFFPLATELLENCYNVESIEESKMIVEKIKEIRLAKTLKGIKCLDGKALNMNNITLFEFNEIKELILGSAEVGR
type: DOMAIN
name: GINS_A
description: GINS subunit, domain A

phrase: SPEEILHIAYEELVEIEPMTSIPELRLLERTYPPLMPLDIARIPLYAALLLKKSNMCK
type: DOMAIN
name: PSF2_N
description: DNA replication complex GINS protein PSF2, N-terminal domain

phrase: SPEEILHIAYEELVEIEPMTSIPELRLLERTYPPLMPLDIARIPLYAALLLKKSNMCKIRL
type: DOMAIN
name: PSF2_N
description: DNA replication complex GINS protein PSF2, N-terminal domain
Protein sequence:
MDKSFTLSRNENGIAVLTMDVPGETMNTLRAEFGPEISEVLTEIRSDHQIKGLVIISGKKDSFVAGADISMLDACTSADDAKQLSQQGHEVFLALEALTIPVVAAINGPCLGGGLELALACHMRVCTDSAKTMMGLPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQLRPKQALKMGLVNDVVPESILLRTAIEMALSGKKMPKKAKASMVNRVLEGTSAGRNIIFDQALKQVNKKTHGNYPAPEKIIDCVRQGMTKGLIKGLEVEATHFADLVMSPESEALRSIFFATTEMKKESGAGDVQAKPVKKAMILGGGLMGGGIASVTTTKAKIPARVKDINETGLSNALSYAYKLLDKGVKRRHMTSAARDNLMALMTTTTEYKGIKDADIVVEAVFEDLGLKHQMVKDVERECGEHTIFASNTSSLPISQIAEAAQRPENVIGLHYFSPVEKMPLVEVIAHEKTSAETIATTVAFARKQGKTPIVVQDGAGFYVNRILALYMNEAANLLLQGESVEHLDKALVKFGFPVGPMTLLDEVGIDVGAKISPILEKELGARFQAPTAFDKLLGDDRKGRKNGKGFYQYGTKSKKKLVDESVYAVLGITPTATSDAAEVIQRCVVQMLNEAVRCLEEGIIASARDGDIGAIFGIGFPPFLGGPFRYIDTMGPAKLVEILNQYAQDHGERFKPCAMLVEMAETGSRFHS

Annotated regions:
phrase: GFYVNRILALYMNEAANLLLQGESVEHLDKALVKFGFPVGPMTLLDEVGIDVGAKISPILEKELGARFQAPTAFDKLLGDDRKGRKNGKGFYQ
type: DOMAIN
name: 3HC_DH_C
description: 3-hydroxyacyl-CoA dehydrogenase, C-terminal

phrase: VIQRCVVQMLNEAVRCLEEGIIASARDGDIGAIFGIGFPPFLGGPFRYIDTMGPAKLVEILNQYAQDHGERFKPCAMLVEMAET
type: DOMAIN
name: 3HC_DH_C
description: 3-hydroxyacyl-CoA dehydrogenase, C-terminal

phrase: AMILGGGLMGGGIASVTTTKAKIPARVKDINETGLSNALSYAYKLLDKGVKRRHMTSAARDNLMALMTTTTEYKGIKDADIVVEAVFEDLGLKHQMVKDVERECGEHTIFASNTSSLPISQIAEAAQRPENVIGLHYFSPVEKMPLVEVIAHEKTSAETIATTVAFARKQGKTPIVVQ
type: DOMAIN
name: 3-OHacyl-CoA_DH_NAD-bd
description: 3-hydroxyacyl-CoA dehydrogenase, NAD binding

phrase: VAAINGPCLGGGLELALACH
type: CONSERVED_SITE
name: Enoyl-CoA_hyd/isom_CS
description: Enoyl-CoA hydratase/isomerase, conserved site
Protein sequence:
MLIQILTIHPAIVAPVFRESILGRACEAGILDLRVVNIRDFALSKHQQTDDYPYGGGAGLLMKPEPVFGAVRWAAGRAPAGARPPRVILMDPQGRRFDQRYAEELAREDHLILICGRYEGFDERIRALATDEISIGDYVLMGGEVAALVVVEAVTRLIPGVLGDLESSVAESHTSGLLEGPQYTRPAEFEGMRVPEILTSGNHGAIARWRREQALRRTFERRPDLLQSADLTPEERRLVEAWRTRQS

Annotated regions:
phrase: GRACEAGILDLRVVNIRDFALSKHQQTDDYPYGGGAGLLMKPEPVFGAVRWAAGRAPAGARPPRVILMDPQGRRFDQRYAEELAREDHLILICGRYEGFDERIRALATDEISIGDYVLMGGEVAALVVVEAVTRLIPGVLGDLESSVAESHTSGLLEGPQYTRPAEFEGMRVPEILTSGNHGAIARWRREQALRRTFERR
type: DOMAIN
name: tRNA_MeTrfase_TRMD/TRM10
description: tRNA methyltransferase TRMD/TRM10-type domain
Protein sequence:
MLPAHKLTLETLLAETVKQVATASQGASEAAFVSPAITLERPKVAAHGDVACNVAMQLAKPLRANPRQLAQQIVDALLAQPQAKGLVEAAEVAGPGFINLRLAAAAKQAVIAAVFAEKEAFGRSQRDAGKHVLIEFVSANPTGPLHVGHGRQAALGDALSNVLASQGYDVHREFYYNDAGVQIQTLALSTQARARGLAPGDAGWPASAYNGEYIAEIARDYLNGVTVAASDGEPVTGARDVEDLEAIRRFAVAYLRREQDMDLQAFGVKFDQYYLESSLYKEGRVEKTVEALIAAGKTYEQEGALWLRTTDDGDDKDRVMRKTDGTYTYFVPDVAYHVAKWERGFTKVINVQGSDHHGTIARVRAGLQGLGVGIPKGYPDYILHKMVTVMRNGEEVKISKRAGSYVTVRDLIEWSGGATPGSEAAVDLIDEETIRRGRDAVRFFLISRKADTEFVFDIDLALKQNDENPVHYVQYAHARICSVIAECKARYSTDESTLADVDVSPLTSERAMALLNKLAEFPDMLQHAADELAPHAVAFYLRDLAGEFHSFYNDRTERVLVDDAAERNARVALLAATRQVLANGLATIGVSAPVKM

Annotated regions:
phrase: VLIEFVSANPTGPLHVGHGRQAALGDALSNVLASQGYDVHREFYYNDAGVQIQTLALSTQARARGLAPGDAGWPASAYNGEYIAEIARDYLNGVTVAASDGEPVTGARDVEDLEAIRRFAVAYLRREQDMDLQAFGVKFDQYYLESSLYKEGRVEKTVEALIAAGKTYEQEGALWLRTTDDGDDKDRVMRKTDGTYTYFVPDVAYHVAKWERGFTKVINVQGSDHHGTIARVRAGLQGLGVGIPKGYPDYILHKMVTVMRNGEEVKISKRA
type: DOMAIN
name: ArgRS_core
description: Arginyl-tRNA synthetase, catalytic core domain

phrase: LLAETVKQVATASQGASEAAFVSPAITLERPKVAAHGDVACNVAMQLAKPLRANPRQLAQQIVDALLAQPQAKGLVEAAEVAGPGFINLR
type: DOMAIN
name: Arg-tRNA-synth_N
description: Arginyl tRNA synthetase N-terminal domain

phrase: AVFAEKEAFGRSQRDAGKHVLIEFVSANPTGPLHVGHGRQAALGDALSNVLASQGYDVHREFYYNDAGVQIQTLALSTQARARGLAPGDAGWPASAYNGEYIAEIARDYLNGVTVAASDGEPVTGARDVEDLEAIRRFAVAYLRREQDMDLQAFGVKFDQYYLESSLYKEGRVEKTVEALIAAGKTYEQEGALWLRTTDDGDDKDRVMRKTDGTYTYFVPDVAYHVAKWERGFTKVINVQGSDHHGTIARVRAGLQGLGVGIPKGYPDYILHKMVTVMRNGEEVKISKRAGSYVTVRDLI
type: DOMAIN
name: ArgRS_core
description: Arginyl-tRNA synthetase, catalytic core domain

phrase: PTGPLHVGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: LTLETLLAETVKQVATASQGASEAAFVSPAITLERPKVAAHGDVACNVAMQLAKPLRANPRQLAQQIVDALLAQPQAKGLVEAAEVAGPGFINLR
type: DOMAIN
name: Arg-tRNA-synth_N
description: Arginyl tRNA synthetase N-terminal domain

phrase: VQYAHARICSVIAECKARYSTDESTLADVDVSPLTSERAMALLNKLAEFPDMLQHAADELAPHAVAFYLRDLAGEFHSFYNDRTERVLVDDAAERNARVALLAATRQVLANGLATIGVSAPVK
type: DOMAIN
name: DALR_anticod-bd
description: DALR anticodon binding

phrase: VQYAHARICSVIAECKARYSTDESTLADVDVSPLTSERAMALLNKLAEFPDMLQHAADELAPHAVAFYLRDLAGEFHSFYNDRTERVLVDDAAERNARVALLAATRQVLANGLATIGVSAPVK
type: DOMAIN
name: DALR_anticod-bd
description: DALR anticodon binding
Protein sequence:
MRKRISAIIMTLFMVLVSCNSGGVAEDPKTVYLTSIANLGKGFLDVFVTFGDMVAGAFGIKADTKKSDIGKYFNDIEKTMTTVKKRLQDEVAKNGNYVKVKEVVDKFVADVLDKIAAGAKKQLRATGDAAIGMLLNEDAAPAEVASVNSLVKGIKEIVGVVLKDNEGDAAATKTADAEKKSVGKLLGKGAADGTETQAAAASASIGAITGADILQAIAKSGKAGAGEIKIEEAKNAAEIAAAKADSKDLAIDSAKKDAVIAAGIALRAMAKDGKFAAKNNEEKSANAVNGAAASAVGKTLSTLIIAIRNTVDSGLKTINEALATVKQEDKSAEATNPAEATTSGQ

Annotated regions:
Protein sequence:
MSASVTSSDGRGPASPTSSSTGASTNPATSGLAAALKGATLAFQHQQRTAAKGSDTAVPRPHGGSRVPTPGTGSVSTSTSRTVGGSNGARLAATLAAREHSPPTTSKNEASRVVTSTPSSSSSVGSAGRTNRQELHGQATGGSSQQQQQQQHVEERANDHAPSKRPAMRSRRPSLASLSSQAVDNSHSHPPTPASAKPSSEPKSVSWIAATLAATSIAPTTSLVAMFDGKQEEAETATKKKKKKKPRPASKTQHHQTLTSPSPTPSEGLSIENQCGTGGVPSVASGKSKVAPKPKPKPRRDISLSTVESIKSSTGAMGRDGKSSNQEQGETRNRNGDVRDKPSREGGKVTVTGAKDIVFEGTSERRSQQKVPATPRSVQSKQGVEVPTDKRPSTPPVSQHAQISETTIISPQPRRVVSTPRLESSPAVPKTYKTVTNPRPDNKPTIRKSSRVVSPSVDQSQTIRQSAETGLGDRHTSRNSTSSDETFVSASSSPSPRPQTPTKELERVRPRLDRANTSTSSRASRVSTPASVRSPASQTRPSPVLRPGTGLYSYSTGASPTPEMSLDSLTNAMIASNLASSRLTALTQTSLESPGLPPVPPPRRGHRHHHLPHPHLRHRTQSPPHARPLIPQRTADSLPVRTGPSRQTEHTQPASLLKTLRAPRSLSDDEDLRLQTHRHRKKHLGGKKHAHNEGARRRWRDEMTIRQRRRYEAVWASNRGLFLRPGFAFEHPENWQPLPPPDDSLGQVDLSRAWESPEADLVVNVVVRDIWSRSRLPVDELAEVWELVDRRKCGALDKQEFVVGMWLIDQRLRGRKIPTVVGEGVWESAMDRVLSVNVKAPKAHKGRTKGHLKGVF

Annotated regions:
phrase: RDIWSRSRLPVDELAEVWELVDRRKCGALDKQEFVVGMWLIDQRLRGRKIPTV
type: DOMAIN
name: EH_dom
description: EH domain

phrase: QPLPPPDDSLGQVDLSRAWESPEADLVVNVVVRDIWSRSRLPVDELAEVWELVDRRKCGALDKQEFVVGMWLIDQRLRGRKIPTVVGEGVWESAM
type: DOMAIN
name: EH_dom
description: EH domain

phrase: SPEADLVVNVVVRDIWSRSRLPVDELAEVWELVDRRKCGALDKQEFVVGMWLIDQRLRGRKIPT
type: DOMAIN
name: EH_dom
description: EH domain

phrase: RAWESPEADLVVNVVVRDIWSRSRLPVDELAEVWELVDRRKCGALDKQEFVVGMWLIDQRL
type: DOMAIN
name: EH_dom
description: EH domain
Protein sequence:
MQVTVEDLSSVKKVLHIEAPAEDVKKALDSAYAELKKQAKVKGFRPGKAPRSVLERLYKSDVESDVAGEIISDAFRDAIMETKLKIVGPPEIEPPAIVSDEPYKFDATVEIFPELSDLNLKEIELSKNMYKATEQEIENQIAMIRKNMSSLETEEEDRPAKEEDFVLIDYEGVCPDGQPDELRFTENFTMELGTGRILKDFDAQIVGMKRDEEKDFEISFPEDYFNKELASKQVKFHVKLKEIRKQILPELDDEFAKDLGEYETLDQLKDSIRDHLQQGYDRRSEQELDEQVFQALLNRVEFEVPETLIKHETASMVSEAERALSYRDMTFEDTGATKEDMEERYREPAEQQVRRYLLLDKIVEQENVELPEEELENAFKGMAESLRQPLEIVKKYYASDAEQMNMLRQTLLQKEALKYVKNLNEIKEVELELQETEE

Annotated regions:
phrase: TLDQLKDSIRDHLQQGYDRRSEQELDEQVFQALLNRVEFEVPETLIKHETASMVSEAERALSYRDMTFEDTGATKEDMEERYREPAEQQVRRYLLLDKIVEQENVELPEEELENAFKGMAESLRQPLEIVKKYYASDAEQMNMLRQTLLQKEALKYV
type: DOMAIN
name: Trigger_fac_C
description: Trigger factor, C-terminal

phrase: RPAKEEDFVLIDYEGVCPDGQPDELRFTENFTMELGTGRILKDFDAQIVGMKRDEEKDFEISFPEDYFNKELASKQVKFHVKL
type: DOMAIN
name: PPIase_FKBP_dom
description: FKBP-type peptidyl-prolyl cis-trans isomerase domain

phrase: EDFVLIDYEGVCPDGQPDELRFTENFTMELGTGRILKDFDAQIVGMKRDEEKDFEISFPED
type: DOMAIN
name: PPIase_FKBP_dom
description: FKBP-type peptidyl-prolyl cis-trans isomerase domain

phrase: MQVTVEDLSSVKKVLHIEAPAEDVKKALDSAYAELKKQAKVKGFRPGKAPRSVLERLYKSDVESDVAGEIISDAFRDAIMETKLKIVGPPEIEPPAIVSDEPYKFDATVEIFPELSDLNLKEIELSKNMYKATEQEIENQIA
type: DOMAIN
name: Trigger_fac_ribosome-bd_bac
description: Trigger factor, ribosome-binding, bacterial
Protein sequence:
MLRGKKILLGVTGGIAAYKAADVVSRLRKQGAIVYVAMTKGAAEFIAPLTLRTLSGNPVYVDMFAEPKVWNVEHIALAEAVDAVLVAPATANLLAKMTVGLADDFLSTVLLATQAPIFVAPAMNHHMYHHPATQENLKRLRERSVRILGPATGFQACGTDGDGRMSEPQELVEALQSFFAASGVLAGKKALVTAGGTQEPLDPVRYLGNRSSGRMGFAVAEALREAGAETTLVSAPNELPTPPGVRRINIMTAQEMHAAVMGEFARMDIVVKAAAVADYRPAVSAEQKIKKAGTNLALELVPNPDILAECGRKKENQFLVGFAAETENLYEHAQAKMQRKNVDMLVANDVTQPGAGFGSPTNIVSLLFPDGKKIDLPQMNKLDVARRLVQEIAERLSEKE

Annotated regions:
phrase: KKILLGVTGGIAAYKAADVVSRLRKQGAIVYVAMTKGAAEFIAPLTLRTLSGNPVYVDMFAEPKVWNVEHIALAEAVDAVLVAPATANLLAKMTVGLADDFLSTVLLATQAPIFVAPAMNHHMYHHPATQENLKRLRERSVRILGPATGFQACGTDGDGRMSEPQELVEAL
type: DOMAIN
name: Flavoprotein
description: Flavoprotein

phrase: LAGKKALVTAGGTQEPLDPVRYLGNRSSGRMGFAVAEALREAGAETTLVSAPNELPTPPGVRRINIMTAQEMHAAVMGEFARMDIVVKAAAVADYRPAVSAEQKIKKAGTNLALELVPNPDILAECGRKKENQFLVGFAAETENLYEHAQAKMQRKNVDMLVANDVTQPGAGFGSPTNIVS
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal
Protein sequence:
MRPPVYAELQATTNFSFLRGASHAEELALTAEALGLTAIGIVDRNSLAGVVRAWTAAKRRSIRVLTGCRLDFMDGAPSLLCYPTDREAFGRLTRLLTIGQLRAEKGECHLTWRDFLDHSEGQLGLIVPPRVLDDSFEQHLTRMAGDLRGRSWLAASRAYAARDLQRLARLESLGRTSGAPIVATNDVLYHGPERRPLQDVISCVREHCAIQEAGFRLEANAERHIKSPEEMARLFDRWPRAVERTVEIVERIGFDLKDIREQYPDEPVPPGKTAMQHLTDLTWKGAAWRYPNGVSPKVTAQIQEELRLIEKMDYPNYFITVHDIVREARSMGILCQGRGSAANSSVCFCLGVTAIDPTEHRLLFTRFISENRGEPPDIDVDFEHDRREEVMQYVFQRYGRAYAAICGTVIHYRPRSAIRDVGKALGLTEDVTSLLAGTVWGSWGDGLPEDHLRNAGLDPKAPEIARAVGLANDLIGFPRHLSQHVGGFVLTKRRLDETVPIGKAAMKDRTFIEWDKDDIDSLGLMKVDILALGMLHAIQRAMTMLREDHGQDWLKDLADIPKEVPGVYDMLCAADSVGVFQVESRAQMSMLPRLRPREFYDLVIQVAIVRPGPIQGDMVHPYLKRRNKEEPVDWPKPSPEHGPPDELQEILGKTFGVPLFQEQAMSLAIEAAKFTPDEADGLRKAMATFRNLGSPDAYRNKFIEGMVGRGYERAFAERCFKQIEGFSHYGFPESHAASFAKLVYVSAWIKWAWPDVFCAALINAQPMGFYQPAQLVRDAREHGVEVLPPDILTSDWDCTLAPISTGFRPPRVRHDKVACQETRPRWKAVRLGFRQIKGLRETLDIPPLLKARGEGARTPAEFAQGGVPQKALELLAEADAFASVGLSRREALWAVKGLKGEHKAPVQAPLLAGLPLFEERVALPAMAATQEVAEDYRTTSLSLKAHPIGFYRSMLAARGVVPAERLLSLKDGARVSVAGLVLIRQRPGTAKGVVFVTLEDETGVANAVVWKDRFDAARNVVMTASFLIVHGRVQRADNVIHVVAERFTDLSAELSSLRDEPGAPAPRIRQKVSGRLLRSRDFH

Annotated regions:
phrase: QATTNFSFLRGASHAEELALTAEALGLTAIGIVDRNSLAGVVRAWTAAKRRSIRVLTGCRLDFMDGAPSLLCYPTDREAFGRLTRLLTIGQLRAEKGECHLTWRDFLDHSEGQLGL
type: DOMAIN
name: PHP_dom
description: PHP domain

phrase: QHLTDLTWKGAAWRYPNGVSPKVTAQIQEELRLIEKMDYPNYFITVHDIVREARSMGILCQGRGSAANSSVCFCLGVTAIDPTEHRLLFTRFISENRGEPPDIDVDFEHDRREEVMQYVFQRYGRAYAAICGTVIHYRPRSAIRDVGKALGLTEDVTSLLAGTVWGSWGDGLPEDHLRNAGLDPKAPEIARAVGLANDLIGFPRHLSQHVGGFVLTKRRLDETVPIGKAAMKDRTFIEWDKDDIDSLGLMKVDIL
type: DOMAIN
name: DNA_pol3_alpha_NTPase_dom
description: Bacterial DNA polymerase III, alpha subunit, NTPase domain

phrase: VSVAGLVLIRQRPGTAKGVVFVTLEDETGVANAVVWKDRFDAARNVVMTASFLIVHGRVQRADNVIHVVAERFTD
type: DOMAIN
name: NA-bd_OB_tRNA
description: OB-fold nucleic acid binding domain, AA-tRNA synthetase-type

phrase: AELQATTNFSFLRGASHAEELALTAEALGLTAIGIVDRNSLAGVVRAWTAAKRRSIRVLTGCRLDFM
type: DOMAIN
name: Pol/His_phosphatase_N
description: Polymerase/histidinol phosphatase, N-terminal

phrase: GVEVLPPDILTSDWDCTLAPISTGFRPPRVRHDKVACQETRPRWKAVRLGFRQIKGLRETLDIPPLLKARGEGARTPAEFAQGGVPQKALELLAEADAFASVGLSRRE
type: DOMAIN
name: DNAPol_HHH
description: DNA polymerase, helix-hairpin-helix motif

phrase: MLHAIQRAMTMLREDHGQDWLKDLADIPKEVPGVYDMLCAADSVGVFQVESRAQMSMLPRLRPREFYDLVIQVAIVRPGPIQGDMVHPYLKRRNKEEPVDWPKPSPEHGPPDELQEILGKTFGVPLFQEQAMSLAIEAAKFTPDEADGLRKAMATFRNLGSPDAYRNKFIEGMVG
type: DOMAIN
name: DNA_pol3_finger
description: DNA polymerase III alpha subunit finger domain
Protein sequence:
MAPKQIRTIGQVSQYVCLLSKPVSPVSGQVRQFTSPVDASIPASKQKFVPSSGTYPKGFKVSGSHAGVKASNTSAPDLALVWSEEPCSAAAVFTTNKFQAAPVQVSSELIRKRNGNGIRGVIVNAGCANAVTGKKGLQDARSMSKKADECNGLKEEDSSTLVMSTGVIGQLLPIERILNKVPEAQSNLASTHAAWLRTARAICTTDTFPKLTSRSFSLPSSPDRTYSIAGMTKGAGMIHPNMATLLGIICTDAPIEAPVLQSLLSHSISRSFNSISVDGDTSTNDTVAILANGAAGGTPISSTGSKDYTAMQSILTQFTQSLAQLVVRDGEGATKFVTVRVKNSPSYTDAKCIASTIARSPLVKTALYGKDANWGRILCAVGYTPDLTPGTVVPERTSVSFKPADGSAELKLLVNGEPESVDEGRASSILQHEDLEIVVDLGGGASGEAGRGGEDAIYWFCDFSHEYVTINGDYRT

Annotated regions:
Protein sequence:
MAKEKISPGMQQYLDIKKNYPDAFLLFRMGDFYELFYDDAVKAAQILEISLTSRNKNADNPIPMAGVPYHSAQAYIDVLVEMGYKVAIAEQMEDPKQAVGVVKREVVQVITPGTVVDSSKPDSANNFLVAIDKVGSRFGLSYMDVSTGEFFATELDDFSSVCSEIQNLKAREVVVGYDLLETDEQVLVNQLNLLLSKETEGYDDVHLIGNSLTDLESSVASKLLQYVHRTQMRELSHLQKAQHYEIKDYLQMSYATKSSLDLLENARTGKKHGSLFWLLDKTKTAMGMRLLRTWIDRPLVNQASIIERQNIIQVFLDNFFERSDLAESLKGVYDIERLASRVSFGKANPKDLIQLGHTLAQVPVIKAILESFNDDALSGLLQELDALPELESLIRSAIDPDAPATITEGGIIRDGFDETLDKYRKVMSEGTSWIADIEAKEREASGITTLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLKNSERFGTAELAKIEGEMLEAREKSSTLEYDIFMRVREQVERYIDRLQSLAKAIATVDVLQSLAVTAETNHYVRPVFNDEHRIAIDRGRHAVVEKVMGVQEYIPNTITFDSQTNIQLITGPNMSGKSTYMRQLALSVVMAQMGAYVPADSVDLPVFDAIYTRIGAADDLISGQSTFMVEMMEANQAIKRATPNSLIIFDELGRGTATYDGMALAQSIIEFIHDKVGAKTMFATHYHELTALSNSLTHLVNVHVATLEKDGEVTFLHKIVDGPADKSYGIHVAKIAG

Annotated regions:
phrase: ATKSSLDLLENARTGKKHGSLFWLLDKTKTAMGMRLLRTWIDRPLVNQASIIERQNIIQVFLDNFFERSDLAESLKGVYDIERLASRVSFGKANPKDLIQLGHTLAQVPVIKAILESFNDDALSGLLQELDALPELESLIRSAIDPDAPATITEGGIIRDGFDETLDKYRKVMSEGTSWIADIEAKEREASGITTLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLKNSERFGTAELAKIEGEMLEAREKSSTLEYDIFMRVREQVERYIDRLQSLAKAIATVDVLQSL
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: LITGPNMSGKSTYMRQLALSVVMAQMGAYVPADSVDLPVFDAIYTRIGAADDLISGQSTFMVEMMEANQAIKRATPNSLIIFDELGRGTATYDGMALAQSIIEFIHDKVGAKTMFATHYHELTALSNSLTHLVNVHVATLEKDGEVTFLHKIVDGPADKSYGIHVAKIA
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: TNIQLITGPNMSGKSTYMRQLALSVVMAQMGAYVPADSVDLPVFDAIYTRIGAADDLISGQSTFMVEMMEANQAIKRATPNSLIIFDELGRGTATYDGMALAQSIIEFIHDKVGAKTMFATHYHELTALSNSLTHLVNVHVATLEKDGEVTFLHKIVDGPADKSYGIHVAKIA
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: GFDETLDKYRKVMSEGTSWIADIEAKEREASGITTLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLKNSERFGTAELAKIEGEMLEAR
type: DOMAIN
name: DNA_mismatch_repair_MutS_clamp
description: DNA mismatch repair protein MutS, clamp

phrase: KKHGSLFWLLDKTKTAMGMRLLRTWIDRPLVNQASIIERQNIIQVFLDNFFERSDLAESLKGVYDIERLASRVSFGKANPKDLIQLGHTLAQVPVIKAILESFNDDALSGLLQELDALPELESLIRSAIDPDAPATITEGGIIRDGFDETLDKYRKVMSEGTSWIADIEAKEREASGITTLKIDYNRKDGYYFHVTNSNLSLVPDHFFRKATLKNSERFGTAELAKIEGEMLEAREKSSTLEYDIFMRVREQVERYIDRLQSLAKAIATVDVLQSLAVTAETNHYVRPVFNDEHRIAIDRGRHAVVEK
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: PGMQQYLDIKKNYPDAFLLFRMGDFYELFYDDAVKAAQILEISLTSRNKNADNPIPMAGVPYHSAQAYIDVLVEMGYKVAIAEQMEDPKQAVGVVKREVVQVITPGTVVD
type: DOMAIN
name: DNA_mismatch_repair_MutS-lik_N
description: DNA mismatch repair protein MutS-like, N-terminal

phrase: SLIIFDELGRGTATYD
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: NFLVAIDKVGSRFGLSYMDVSTGEFFATELDDFSSVCSEIQNLKAREVVVGYDLLETDEQVLVNQLNLLLSKETEGYDDVHLIGNSLTDLESSVASKLLQYVHRTQMRELSHL
type: DOMAIN
name: DNA_mmatch_repair_MutS_con_dom
description: DNA mismatch repair protein MutS, connector domain
Protein sequence:
MIRLFVGLGNPGPEYEATRHNAGFWWTDALARRWNCQLQPDRSYHGLMARCTQRGTPVWLLQPMTYMNLSGKSVAALARFFKIEPAEILVVHDELDLLPGQMKLKQGGSAAGHNGLKDIQAQLGNPEFWRLRLGIGHPGVKAEVAAYVLRKPPSAEREAIEACIDRSLDAVDRMLGADMPAAMMQMHAKPPRPKPPRPVTAPGAPVPPTEPSA

Annotated regions:
phrase: SAAGHNGLKD
type: CONSERVED_SITE
name: Pept_tRNA_hydro_CS
description: Peptidyl-tRNA hydrolase, conserved site
Protein sequence:
MASTSDFKNGLVLQIEGQLWTITEFQHVKPGKGPAFVRTKLKNVLSGKVVDKTFNAGVKVDTATVDRRDMTYLYHDGTDYIFMDGDTYDQISISEATVGDGARFMLENMAVQVATHEDVPLFVELPVTVELVVQHTDPGLQGDRSTGGTKPATLETGAEINVPLFINTGDKLKVDSRDGNYLGRVNS

Annotated regions:
phrase: RDMTYLYHDGTDYIFMDGDTYDQISISEATVGDGARFMLENMAVQVATHEDVP
type: DOMAIN
name: Transl_elong_P/YeiP_cen
description: Translation elongation factor P/YeiP, central

phrase: STSDFKNGLVLQIEGQLWTITEFQHVKPGKGPAFVRTKLKNVLSGKVVDKTFNAGVK
type: DOMAIN
name: Transl_elong_KOW-like
description: Translation elongation factor, KOW-like

phrase: VELVVQHTDPGLQGDRSTGGTKPATLETGAEINVPLFINTGDKLKVDSRDGNYLG
type: DOMAIN
name: Elong-fact-P_C
description: Elongation factor P, C-terminal

phrase: DRRDMTYLYHDGTDYIFMDGDTYDQISISEATVGDGARFMLENMAVQVATHEDVPLFVEL
type: DOMAIN
name: Transl_elong_P/YeiP_cen
description: Translation elongation factor P/YeiP, central

phrase: VELVVQHTDPGLQGDRSTGGTKPATLETGAEINVPLFINTGDKLKVDSRDGNYLG
type: DOMAIN
name: Elong-fact-P_C
description: Elongation factor P, C-terminal

phrase: RRDMTYLYHDGTDYIFMDGDTYDQISISEATVGDGARFMLENMAVQVATHEDVP
type: DOMAIN
name: Transl_elong_P/YeiP_cen
description: Translation elongation factor P/YeiP, central

phrase: KPATLETGAEINVPLFINT
type: CONSERVED_SITE
name: Transl_elong_P/YeiP_CS
description: Translation elongation factor P/YeiP, conserved site

phrase: VELVVQHTDPGLQGDRSTGGTKPATLETGAEINVPLFINTGDKLKVDSRDGNYLG
type: DOMAIN
name: Elong-fact-P_C
description: Elongation factor P, C-terminal
Protein sequence:
MSAETKKTDVKKVVLAYSGGLDTSAIIPWLKETYDNCEIVAFCADVGQGSEELEGLHEKAIASGASECYIVDLKEELVADYIYPTIATGAIYEGTYLLGTSMARPIIAKAQVEVARKVGADAVCHGCTGKGNDQVRFEGCFAALAPDLKVIAPWREWEMVSREDLLDYLAERNIETTASATKIYSRDANAWHISHEGGELEDPWNEPTQGVWTMTVAPEDAPNTPEYVALELEQGKITKVNGEALSPYKALMLLNDLAGAHGVGRIDITENRLVGMKSRGCYETPGGTVMFAALRAIEELVLDKTSREWREQVGAQMAHLVYDGRWFTPLCESLLGASKPLADLVNGEVVIKLYKGQASAVKKRSPNSLYSEEFATFGEDDVYNQKDAEGFIRLYSLSSRIRALHGHNK

Annotated regions:
phrase: GCTGKGNDQVR
type: CONSERVED_SITE
name: Arginosuc_synth_CS
description: Argininosuccinate synthase, conserved site

phrase: YSRDANAWHISHEGGELEDPWNEPTQGVWTMTVAPEDAPNTPEYVALELEQGKITKVNGEALSPYKALMLLNDLAGAHGVGRIDITENRLVGMKSRGCYETPGGTVMFAALRAIEELVLDKTSREWREQVGAQMAHLVYDGRWFTPLCESLLGASKPLADLVNGEVVIKLYKGQASAVKKRSPNSLYSEEFATFGEDDVYNQKDAEGFIRLYSLSSR
type: DOMAIN
name: Arginosuc_syn_C
description: Arginosuccinate synthase C-terminal domain

phrase: AYSGGLDT
type: CONSERVED_SITE
name: Arginosuc_synth_CS
description: Argininosuccinate synthase, conserved site

phrase: KVVLAYSGGLDTSAIIPWLKETYDNCEIVAFCADVGQGSEELEGLHEKAIASGASECYIVDLKEELVADYIYPTIATGAIYEGTYLLGTSMARPIIAKAQVEVARKVGADAVCHGCTGKGNDQVRFEGCFAALAPDLKVIAPWREWEMVSREDLLDYLAERNI
type: DOMAIN
name: Arginosuc_syn_N
description: Arginosuccinate synthase-like, N-terminal domain
Protein sequence:
MKHPIHVTSEIGELQTVLLKRPGKEVENLTPDYLQQLLFDDIPYLPIIQKEHDYFAQTLRNRGVEVLYLEKLAAEALVDKKLREEFVDRILKEGQADVNVAHQTLKEYLLSFSNEELIQKIMGGVRKNEIETSKKTHLYELMEDHYPFYLDPMPNLYFTRDPAASVGDGLTINKMREPARRRESLFMEYIIKYHPRFAKHNVPIWLDRDYKFPIEGGDELILNEETIAIGVSARTSAKAIERLAKNLFSRQNKIKKVLAIEIPKCRAFMHLDTVFTMVDYDKFTIHPAIQGPKGNMNIYILEKGADEETLKITHRTSLMEALKEVLDLSELVLIPCGGGDVIASAREQWNDGSNTLAIAPGVVVTYDRNYVSNTLLREHGIEVIEVLSSELSRGRGGPRCMSMPIVRKDI

Annotated regions:
Protein sequence:
MGVRECPARLLLPSLLLLSLGLPVLGAPPRLSLICDGRVLERYILEAKEAENVTMGCAEGCSLSENITVPDTKVNFYAWKRMEVGQQAVEVWQGLALLSEAVLRGQALLANSSQPSETLQLHMDKAVSGLRSLTSLLRALGAQKEAISPPVAASAAPLRTFTVDTLCKLFRIYSNFLRGKLKLYTGEACRRGDR

Annotated regions:
Protein sequence:
MSSWPPRVVIRRSAGLRTMESALARTGLGPVAGVDEAGRGACAGPLVIAACVLAPKPQAALARLDDSKKLTERAREELFPAIKRLALAWSVVSVPAAEVDQIGIHVANIEGMRRAVAGLDLEPGYVLTDGFRVPGLTAPSLPVIGGDGAAACIAAASVLAKVTRDRVMTEMDETHPGYGFAIHKGYSTPLHMDALDELGPCPEHRMTYANVVAAGVRLEQRAGRTG

Annotated regions:
phrase: AGVDEAGRGACAGPLVIAACVLAPKPQAALARLDDSKKLTERAREELFPAIKRLALAWSVVSVPAAEVDQIGIHVANIEGMRRAVAGLDLEPGYVLTDGFRVPGLTAPSLPVIGGDGAAACIAAASVLAKVTRDRVMTEMDETHPGYGFAIHKGYSTPLHMDALDELGPCPEHRMTYAN
type: DOMAIN
name: RNase_HII/HIII_dom
description: Ribonuclease HII/HIII domain

phrase: GPVAGVDEAGRGACAGPLVIAACVLAPKPQAALARLDDSKKLTERAREELFPAIKRLALAWSVVSVPAAEVDQIGIHVANIEGMRRAVAGLDLEPGYVLTDGFRVPGLTAPSLPVIGGDGAAACIAAASVLAKVTRDRVMTEMDETHPGYGFAIHKGYSTPLHMDALDELGPCPEHRMTYANVVAAGVRLE
type: DOMAIN
name: RNase_HII/HIII_dom
description: Ribonuclease HII/HIII domain
Protein sequence:
MEIIIISGRSGAGKSVALRALEDAGYYCVDNIPLDLLPQLTDILSQSQSSVAISLDIRNIPNSAHSLKQTLSTLQKHHQIKIIFLEADRATLIRRYSDSRRLHPLSLKDLSLEAAIDEEYRYLEPLIQHANLILDTTHLSTHSLAERLREFLRGNSEKELKIIVESFGFKYGIPLDADYVFDVRFLPNPHWDPTLRPMTGLEAPVAEFLNSHTEVNEFIYLTRHYIDTWLPMLEKNNRSYLTIAIGCTGGKHRSVYIAQQLGEYFQAKGKTVKIQHKSLERNKKI

Annotated regions:
phrase: MEIIIISGRSGAGKSVALRALEDAGYYCVDNIPLDLLPQLTDILSQSQSSVAISLDIRNIPNSAHSLKQTLSTLQKHHQIKIIFLEADRATLIRRYSDSRRLHPLSLKDLSLEAAIDEEYRYLEPLIQHANLILDTTHLSTHSLAERLREFLRGN
type: DOMAIN
name: RapZ-like_N
description: RapZ-like, N-terminal domain

phrase: KIIVESFGFKYGIPLDADYVFDVRFLPNPHWDPTLRPMTGLEAPVAEFLNSHTEVNEFIYLTRHYIDTWLPMLEKNNRSYLTIAIGCTGGKHRSVYIAQQLGEYFQAKGKTVKIQHKS
type: DOMAIN
name: RapZ_C
description: RapZ, C-terminal domain