nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MKHIEIYTDGSCLNNPGFGGWAYILRYKEYQKEGFGAEANTTNNRMELMAIIESLKALKEPCEISLFTDSNLMVQSINEWLEGWIKKDFKGKKNIDLWKEYIKVAKSHKIKAFWVKAHNGHLENERCDTLAREAALKIARENDEKH

Annotated regions:
phrase: KHIEIYTDGSCLNNPGFGGWAYILRYKEYQKEGFGAEANTTNNRMELMAIIESLKALKEPCEISLFTDSNLMVQSINEWLEGWIKKDFKGKKNIDLWKEYIKVAKSHKIKAFWVKAHNGHLENERCDTLAREA
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: MKHIEIYTDGSCLNNPGFGGWAYILRYKEYQKEGFGAEANTTNNRMELMAIIESLKALKEPCEISLFTDSNLMVQSINEWLEGWIKKDFKGKKNIDLWKEYIKVAKSHKIKAFWVKAHNGHLENERCDTLAREAA
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain
Protein sequence:
MERITVTLGERSYPITIAAGLFNDPASFMPLKAGEQVMLVTNQTLAPLYLDHVRKVLEQAGVMVDQVILPDGEQYKSLAVLEQVFSALLEKPHGRDTTLIALGGGVIGDLTGFAAACYQRGVRFIQVPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQPVSVVVDLDCLKTLPARELSSGLAEVIKYGIILDHDFFVWLENNIDALVALDMQALAYCIRRCCELKAEVVAADERESGLRALLNLGHTYGHAIEAEMGYGVWLHGEAIAAGMVMAAETAHRLGQFSREDIERIKALLLRAGLPVCGPQEMAPGTYLPHMMRDKKVLAGELRLVLPTAIGQAEVRGGVGHDMVLASIAACFPDGMSK

Annotated regions:
phrase: VILPDGEQYKSLAVLEQVFSALLEKPHGRDTTLIALGGGVIGDLTGFAAACYQRGVRFIQVPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQPVSVVVDLDCLKTLPAREL
type: DOMAIN
name: DHQS/DOIS_N
description: 3-dehydroquinate synthase, N-terminal domain

phrase: GLAEVIKYGIILDHDFFVWLENNIDALVALDMQALAYCIRRCCELKAEVVAADERESGLRALLNLGHTYGHAIEAEMGYGVWLHGEAIAAGMVMAAETAHRLGQFSREDIERIKALLLRAGLPVCGPQEMAPGTYLPHMMRDKK
type: DOMAIN
name: DHQS_C
description: 3-dehydroquinate synthase, C-terminal domain
Protein sequence:
MNYLITIIGPTAIGKTSLSIALAKQYNCDIISCDSRQFFKEMRIGTAVPSDEELSQATHHFIQNKSIFEEYTVGDFEKEAITKLDELFSKNNIQIMVGGSGLYADAVLKGFDSFPNIKPEIREKIQEQYDENGIQYLQQKLQELDTEYYSKILSQNPQTLQNPQRMMRFVEVCLGTGKPYSSFLNKDKITRNFTTIIIGLEADREIMYDRINQRVDIMINEGLLAEAEKLYPNKDLNALQTVGYRELFSFFDADFTLNFAIEEIKKNTRRFSKRQITWFKRTENTIWFDYKADTSKIIEVINTKMKH

Annotated regions:
Protein sequence:
MKSCRIAILGATGAVGRTMLQVLEEQTDWLIGPVKLLASPRSAGQNLMFKGQPLTLEAVSEDSFADVDVVLGAVENELAKRWAPVIVKAGAVFVDNSSAFRLDPDVPLVIPQINPQDIRTHQGIIANPNCATIIALMAVAPIYRLSRITRMIVSTYQAVSGAGAAGLAELKRQIAQLEAGQPVSAETFPVQIAYNLIPQIGGFDKQGYSSEEMKLQNEGRKILHDPALRVSCTCVRVPVLRCHSESITLETEREVSLDEVRRAITEAEGVVLNEQPYPTPLACTDQDMVEVGRLRRDLASEQGIALWCCGDQLRKGAATNAVEIVRALWQGQEV

Annotated regions:
phrase: APIYRLSRITRMIVSTYQAVSGAGAAGLAELKRQIAQLEAGQPVSAETFPVQIAYNLIPQIGGFDKQGYSSEEMKLQNEGRKILHDPALRVSCTCVRVPVLRCHSESITLETEREVSLDEVRRAITEAEGVVLNEQPYPTPLACTDQDMVEVGRLRRDLASEQGIALWCCGDQLR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: VSCTCVRVPVLRCH
type: CONSERVED_SITE
name: Asp-semialdehyde_DH_CS
description: Aspartate-semialdehyde dehydrogenase, conserved site

phrase: RIAILGATGAVGRTMLQVLEEQTDWLIGPVKLLASPRSAGQNLMFKGQPLTLEAVSEDSFADVDVVLGAVENELAKRWAPVIVKAGAVFVDNSSAFRLDPDVPLVIPQINPQDIRT
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: RIAILGATGAVGRTMLQVLEEQTDWLIGPVKLLASPRSAGQNLMFKGQPLTLEAVSEDSFADVDVVLGAVENELAKRWAPVIVKAGAVFVDNSSAFRLDPDVPLVIPQINPQDIR
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MQSLKHHFLLAMPHLDDPNFKGTLTYLCDHDENGTMGVIVNRPMELTLDALLEQLELDAAECPCREMPVHYGGPVHKDRGFILHRGSSLPWDSSLQVADDIALTTSMDMLKAIANGQGPEDFIVCLGCAAWQAGQLEDELKQNTWLTVEGDASILFEVHAEQRLSAAAGILGIDLNLMSREAGHS

Annotated regions:
Protein sequence:
MEAERRHRALYKGTTPPWKETYRKRCVERLKSNRSKLLDKFRQVGERIHGGVGGSFLVQEVMEEEWKVMQFENGGFPSMWKKDAFSQDPDELATLEEIKQELLLEEKAMVEEFENILQFEEQCFDSVVELSTGDQIVCPVCNRNYLTVTSCFIVCQCGVYINTQSQGMSIEKLHSLLESNLTAHAYHCNKLPVFSVATELGGAASLFMSCQECDAMVVIL

Annotated regions:
phrase: VCPVCNRNYLTVTSCFIVCQCGVYINTQSQGMSIEKLHSLLESNLTAHAYHCNKLPVFSVATELGGAASLFMSCQECDA
type: DOMAIN
name: RPA_interact_C_dom
description: RPA-interacting protein, C-terminal domain

phrase: RHRALYKGTTPPWKETYRKRCVERLKSNRSKLLDKFR
type: DOMAIN
name: RPA_interact_N_dom
description: RPA-interacting protein, N-terminal domain
Protein sequence:
MTKRILLIVSGGIAAYKSLELIRLLKRRGIAVRAVMTQSAEKFVTPLSLGVLTEDHVYGDMFDLKEEREIGHIQLSRQADLIVIAPATADILARMAGGIANDLATTVLLATDKPVLAVPAMNVRMWQHPATQRNLATLRADGITIMEPASGSMACGEFGKGRLPEPEEIVAEILHRLDRPHAPGPLADRPAFAQDRQRLAGRHVLVTAGPTHEPIDPVRYIANRSSGKQGFAIAAAAARAGARVTLVAGPVHLPTPAGVDRVDVETARDMLAAVEAALPADAAIMVAAVADWRAADASGQKIKKDGSGRPAPLALAENPDILATLGRHARRPALVIGFAAETEKIAEHAQAKLARKGADWIVANDVSGDVMGGDNNSVRIVTADGIDSWPAMAKDDVALRLIERLAHALSAQPR

Annotated regions:
phrase: LAGRHVLVTAGPTHEPIDPVRYIANRSSGKQGFAIAAAAARAGARVTLVAGPVHLPTPAGVDRVDVETARDMLAAVEAALPADAAIMVAAVADWRAADASGQKIKKDGSGRPAPLALAENPDILATLGRHARRPALVIGFAAETEKIAEHAQAKLARKGADWIVANDVSGDVMGGDNNSVR
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal

phrase: KRILLIVSGGIAAYKSLELIRLLKRRGIAVRAVMTQSAEKFVTPLSLGVLTEDHVYGDMFDLKEEREIGHIQLSRQADLIVIAPATADILARMAGGIANDLATTVLLATDKPVLAVPAMNVRMWQHPATQRNLATLRADGITIMEPASGSMACGEFGKGRLPEPEEIVAEILH
type: DOMAIN
name: Flavoprotein
description: Flavoprotein
Protein sequence:
MENDLSFGEDVMSYEEESDSAFPSPIRPTPPGHSGNYDLEQSRQEEDSNQAIQSIVVHTDPEAYLNLNTNANTRGDAQAYVELNELMGNSWQETGRWVGYEENFNPGTGKWGPSHVSYLTFKSLIQLRKIMSTGAIILDLQASSLSAVAEKVVDELRTKGEIRAADRDGLLRALLQRRSQSEGAVAQPLGGDIEMQTFSVTKQRDTTDSVEASIVLSGVMDSLEKPAVAFVRLGDSVVIEGALEAPVPVRFVFVLVGPSQGGVDYHESGRAMAALMADWVFSLEAYLAPTNKELTNAIADFMDCGIVIPPTEIQDEGMLQPIIDFQKKMLKDRLRPSDTRIIFGGGAKADEADEEPREDPLARTGIPFGGMIKDMKRRYRHYISDFTDALDPQVLAAVIFIYFAALSPAITFGGLLADKTEHMMGVSELMISTCVQGIIFAFIAAQPTLVIGFSGPLLVFEEAFFAFCKSQEIEYIVGRIWVGLWLVIIVVVIVAVEGSFLVKFISRFTQEIFSILISLIFIYETFSKLGKIFKAHPLVLNYEHLNDSLDNPFHPVVKEHIEYHEDGNKTVHEVIHERAYPNTALLSMCLMFGCFFIAYFLRQFKNGHFLPGPIRRMIGDFGVPIAIFFMIAVDITIEDAYTQKLVVPKGLMVSNPNARGWFINPLGEKKPFPAWMMGACCVPALLVFILIFLESQITTLIVSKPERKMVKGSGFHLDLLILVTMGGIASLFGVPWLSAATVRSVTHANALTVMSKGPKPEIEKVLEQRISGMLVAAMVGVSILLEPILKMIPMTALFGIFLYMGITSLSGIQMWDRMLLLIVPRKYYPADAYAQRVTTMKMHLFTLIQMVCLGALWMVKMSAFSLALPFVLILTIPLRMAITGTLFTDKEMKCLDASDGKVKFEEEPGEDMYESPLP

Annotated regions:
phrase: ILISLIFIYETFSK
type: CONSERVED_SITE
name: Anion_exchange_CS
description: Anion exchange, conserved site

phrase: QAYVELNELMGNSWQETGRWVGYEENFNPGTGKWGPSHVSYLTFKSLIQLRKIMSTGAIILDLQASSLSAVAEKVVDELRTKGEIRAADRDGLLRALLQRRSQ
type: DOMAIN
name: Band3_cytoplasmic_dom
description: Band 3 cytoplasmic domain

phrase: TDSVEASIVLSGVMDSLEKPAVAFVRLGDSVVIEGALEAPVPVRFVFVLVGPSQGGVDYHESGRAMAALMADWVFSLEAYLAPTNKELTNAIADFMDCGIVIPPTEI
type: DOMAIN
name: Band3_cytoplasmic_dom
description: Band 3 cytoplasmic domain

phrase: FGGMIKDMKRR
type: CONSERVED_SITE
name: Anion_exchange_CS
description: Anion exchange, conserved site

phrase: PFGGMIKDMKRRYRHYISDFTDALDPQVLAAVIFIYFAALSPAITFGGLLADKTEHMMGVSELMISTCVQGIIFAFIAAQPTLVIGFSGPLLVFEEAFFAFCKSQEIEYIVGRIWVGLWLVIIVVVIVAVEGSFLVKFISRFTQEIFSILISLIFIYETFSKLGKIFKAHPLVLNYEHLNDSLDNPFHPVVKEHIEYHEDGNKTVHEVIHERAYPNTALLSMCLMFGCFFIAYFLRQFKNGHFLPGPIRRMIGDFGVPIAIFFMIAVDITIEDAYTQKLVVPKGLMVSNPNARGWFINPLGEKKPFPAWMMGACCVPALLVFILIFLESQITTLIVSKPERKMVKGSGFHLDLLILVTMGGIASLFGVPWLSAATVRSVTHANALTVMSKGPKPEIEKVLEQRISGMLVAAMVGVSILLEPILKMIPMTALFGIFLYMGITSLSGIQMWDRMLLLIVPRKYYPADAYAQRVTTMKMHLFTLIQMVCLGALWMVKMSAFSLALPFVLILTIPLRMAITGTLFTDKEMKCLDA
type: DOMAIN
name: HCO3_transpt-like_TM_dom
description: Bicarbonate transporter-like, transmembrane domain
Protein sequence:
MDKIVVQGGDNRLVGSVTIEGAKNAVLPLLAATILASEGKTVLQNVPILSDVFIMNQVVGGLNAKVDFDEEAHLVKVDATGDITEEAPYKYVSKMRASIVVLGPILARVGHAKVSMPGGCTIGSRPIDLHLKGLEAMGVKISQTAGYIEAKAERLHGAHIYMDFPSVGATQNLMMAATLADGVTVIENAAREPEIVDLAILLNEMGAKVKGAGTETITITGVEKLHGTTHNVVQDRIEAGTFMVAAAMTGGDVLIRDAVWEHNRPLIAKLLEMGVEVIEEDEGIRVRSQLENLKAVHVKTLPHPGFPTDMQAQFTALMTVAKGESTMVETVFENRFQHLEEMRRMGLHSEIIRDTARIVGGQPLQGAEVLSTDLRASAALILTGLVAQGETVVGKLVHLDRGYYGFHEKLAQLGAKIQRIEASDEDE

Annotated regions:
phrase: DNRLVGSVTIEGAKNAVLPLLAATILASEGKTVLQNVPILSDVFIMNQVVGGLNAKVDFDEEAHLVKVDATGDITEEAPYKYVSKMRASIVVLGPILARVGHAKVSMPGGCTIGSRPIDLHLKGLEAMGVKISQTAGYIEAKAERLHGAHIYMDFPSVGATQNLMMAATLADGVTVIENAAREPEIVDLAILLNEMGAKVKGAGTETITITGVEKLHGTTHNVVQDRIEAGTFMVAAAMTGGDVLIRDAVWEHNRPLIAKLLEMGVEVIEEDEGIRVRSQLENLKAVHVKTLPHPGFPTDMQAQFTALMTVAKGESTMVETVFENRFQHLEEMRRMGLHSEIIRDTARIVGGQPLQGAEVLSTDLRASAALILTGLVAQGETVVGKLVHLDRGYYGFHEK
type: DOMAIN
name: Enolpyruvate_Tfrase_dom
description: Enolpyruvate transferase domain
Protein sequence:
MSHSVIKVSLSAIDQMKMTYSGSLTASVPQGAVFQAKPPGCTITAYQSGKVLFQGKNAAAESARWGTAEPQEKKKTAKKPADPRYAPPADIAGMSVIGSDEVGTGDYFGPMTVVCAYVDKTMLPLMKELGVKDSKDLKDPQIIEIARNLIKTIPYSLLVLKNEKYNSMQEKGMSQGKMKALLHNQAITHLLRKLDGVKPEAILIDQFAEPGVYFNHLKGRDIVKERTYFSTKAEGIHLAVAAASIIARYSFLMEMDKLSRAAGMTLPKGAGPHVDEAAAKLILKKGASALRTFTKLHFANTQKAQRLADKKRS

Annotated regions:
phrase: SVIKVSLSAIDQMKMTYSGSLTASVPQGAVFQAKPPGCTITAYQSGKVLFQGKNAAAESARWGTAE
type: DOMAIN
name: RNase_HIII_N
description: Ribonuclease HIII, N-terminal

phrase: HSVIKVSLSAIDQMKMTYSGSLTASVPQGAVFQAKPPGCTITAYQSGKVLFQGKNAAAESARWGTAEPQEKKKT
type: DOMAIN
name: RNase_HIII_N
description: Ribonuclease HIII, N-terminal

phrase: IGSDEVGTGDYFGPMTVVCAYVDKTMLPLMKELGVKDSKDLKDPQIIEIARNLIKTIPYSLLVLKNEKYNSMQEKGMSQGKMKALLHNQAITHLLRKLDGVKPEAILIDQFAEPGVYFNHLKGRDIVKERTYFSTKAEGIHLAVAAASIIARYSFLMEMDKLSRAAGMTLPKGAGPHVDEAAAKLILKKGASALRTFTKLHFAN
type: DOMAIN
name: RNase_HII/HIII_dom
description: Ribonuclease HII/HIII domain

phrase: MSVIGSDEVGTGDYFGPMTVVCAYVDKTMLPLMKELGVKDSKDLKDPQIIEIARNLIKTIPYSLLVLKNEKYNSMQEKGMSQGKMKALLHNQAITHLLRKLDGVKPEAILIDQFAEPGVYFNHLKGRDIVKERTYFSTKAEGIHLAVAAASIIARYSFLMEMDKLSRAAGMTLPKGAGPHVDEAAAKLILKKGASALRTFTKLHFANTQKAQRLAD
type: DOMAIN
name: RNase_HII/HIII_dom
description: Ribonuclease HII/HIII domain
Protein sequence:
MVAIRVIRDAGADTQVPLPSYETTGAAGADIRANLPDRGSLTLAPGGRALIPTGLRVEIPAGYEIQIRPRSGLALKHGITLPNTPGTIDSDYRGPLGVILLNAGAEPFEVVHGERIAQLVVAPVVQARFELTEALGETERGAGGFGSTGRG

Annotated regions:
phrase: VPLPSYETTGAAGADIRANLPDRGSLTLAPGGRALIPTGLRVEIPAGYEIQIRPRSGLALKHGITLPNTPGTIDSDYRGPLGVILLNAGAEPFEVVHGERIAQLVVAPVVQARFELTEALGETERGAGGFGST
type: DOMAIN
name: dUTPase-like
description: dUTPase-like

phrase: AGADIRANLPDRGSLTLAPGGRALIPTGLRVEIPAGYEIQIRPRSGLALKHGITLPNTPGTIDSDYRGPLGVILLNAGAEPFEVVHGERIAQLV
type: DOMAIN
name: dUTPase_trimeric
description: dUTPase, trimeric
Protein sequence:
MATNKRTLSRIGFYCGLALFLIITLFPFFVMLMTSFKGAKEAISLHPTLLPQQWTLEHYVDIFNPMIFPFVDYFRNSLVVSVVSSVVAVFLGILGAYALSRLRFKGRMTINASFYTVYMFSGILLVVPLFKIITALGIYDTEMALIITMVTQTLPTAVFMLKSYFDTIPDEIEEAAMMDGLNRLQIIFRITVPLAMSGLISVFVYCFMVAWNDYLFASIFLSSASNFTLPVGLNALFSTPDYIWGRMMAASLVTALPVVIMYALSERFIKSGLTAGGVKG

Annotated regions:
phrase: FRNSLVVSVVSSVVAVFLGILGAYALSRLRFKGRMTINASFYTVYMFSGILLVVPLFKIITALGIYDTEMALIITMVTQTLPTAVFMLKSYFDTIPDEIEEAAMMDGLNRLQIIFRITVPLAMSGLISVFVYCFMVAWNDYLFASIFLSSASNFTLPVGLNALFSTPDYIWGRMMAASLVTALPVVIMYAL
type: DOMAIN
name: MetI-like
description: ABC transporter type 1, transmembrane domain MetI-like

phrase: VFLGILGAYALSRLRFKGRMTINASFYTVYMFSGILLVVPLFKIITALGIYDTEMALIITMVTQTLPTAVFMLKSYFDTIPDEIEEAAMMDGLNRLQIIFRITVPLAMSGLISVFVYCFMVAWNDYLFASIFLSSASNFTLPVGLNALFSTPDYIWGRMMAASLVTALPVVIMYALSE
type: DOMAIN
name: MetI-like
description: ABC transporter type 1, transmembrane domain MetI-like

phrase: FLGILGAYALSRLRFKGRMTINASFYTVYMFSGILLVVPLFKIITALGIYDTEMALIITMVTQTLPTAVFMLKSYFDTIPDEIEEAAMMDGLNRLQIIFRITVPLAMSGLISVFVYCFMVAWNDYLFASIFLSSASNFTLPVGLNALFSTPDYIWGRMMAASLVTALPV
type: DOMAIN
name: MetI-like
description: ABC transporter type 1, transmembrane domain MetI-like
Protein sequence:
MLTKEDFRNKYQYHQATPMLQQYLDIKFTHQCCILLFRVGDFYELFFDDAIVVSKLLGLILAKKGKHAGQDLPMCGIPYHALESYLPRLVEQEHKVALCEQLESPEEAKKRNGYKAVVKREVVRIITSGTITEESLIKANVPNYLAAIVIHKDIASIGYCDVSTAEFIVIDVAIHNLTSELSRINPKEIILSESLQHNSGLLALFDNYKQKIVYQVESYFSFNKAQRVIQNYYEIITIDSIGSLNSTQVSAVGAILEYLSIMQKHSKSKLPFPQIVSYENFMLIDASARKNLELTSTLSGNFKGSLLSIIDATVTNQGGRLLHKFLSTPLAEVNLINSRLQITDFFYQNLQLVENLRQLVKLVPDIERALSRILIAKALPKDLESIKISLKIALSIKKELNKVLEEGNTPKYLEEIYNPLFGDNELYELLDSALLDDLSNSANDCGFIKSSYSTKLEELRNLIHNSSNFIEQLKLQYRQETCIETLKICHNNVWGMFIEVSSKNAHKITDSKFVHKQTTTTAVRFTTTELQTLEAKMLNAKTMAAALEQEILAELCKAISLKSEKLSHLAKSISLIDVFCNFAYISHEYNYCRPEITSDLAFNIVDGRHAVIEKLITKKHESFISNDCNLQNDQRIWLITGPNMAGKSTFLRQNAIIVILAQIGCYVPAQSAQIGVVDKLFSRIGAADDLASGQSTFMVEMVETSVILAQSTFMSLVILDEIGRGTSTYDGISIAWSCLEYIHSNIRCRCLFATHYHELVDLASKLLSLKNFTVKIHDSNDKLSFLYKIIEGAANKSYGIHVAELAGLPRIVLNRAKEILLELEHNKVNINQSNNNITKSIDIAVPPYPVKTIEIIKQLNPDQLTPKEALSIIYKIKNTILLEEDEKMI

Annotated regions:
phrase: YSTKLEELRNLIHNSSNFIEQLKLQYRQETCIETLKICHNNVWGMFIEVSSKNAHKITDSKFVHKQTTTTAVRFTTTELQTLEAKMLNAK
type: DOMAIN
name: DNA_mismatch_repair_MutS_clamp
description: DNA mismatch repair protein MutS, clamp

phrase: NFKGSLLSIIDATVTNQGGRLLHKFLSTPLAEVNLINSRLQITDFFYQNLQLVENLRQLVKLVPDIERALSRILIAKALPKDLESIKISLKIALSIKKELNKVLEEGNTPKYLEEIYNPLFGDNELYELLDSALLDDLSNSANDCGFIKSSYSTKLEELRNLIHNSSNFIEQLKLQYRQETCIETLKICHNNVWGMFIEVSSKNAHKITDSKFVHKQTTTTAVRFTTTELQTLEAKMLNAKTMAAALEQEILAELCKAISLKSEKLSHLAKSISLIDVFCNFAYISHEYNYCRPEITSDLAFNIVDGRHAVIEK
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: WLITGPNMAGKSTFLRQNAIIVILAQIGCYVPAQSAQIGVVDKLFSRIGAADDLASGQSTFMVEMVETSVILAQSTFMSLVILDEIGRGTSTYDGISIAWSCLEYIHSNIRCRCLFATHYHELVDLASKLLSLKNFTVKIHDSNDKLSFLYKIIEGAANKSYGIHVAELAGLPRIVLNRAKEILLEL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: SLVILDEIGRGTSTYD
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: TPMLQQYLDIKFTHQCCILLFRVGDFYELFFDDAIVVSKLLGLILAKKGKHAGQDLPMCGIPYHALESYLPRLVEQEHKVALCEQLESPEEAKKRNGYKAVVKREVVRIITSGTITE
type: DOMAIN
name: DNA_mismatch_repair_MutS-lik_N
description: DNA mismatch repair protein MutS-like, N-terminal

phrase: NYLAAIVIHKDIASIGYCDVSTAEFIVIDVAIHNLTSELSRINPKEIILSESLQHNSGLLALFDNYKQKIVYQVESYFSFNKAQRVIQNYYEIITIDSIGSLNSTQVSAVGAILEYLSIMQKHSKSK
type: DOMAIN
name: DNA_mmatch_repair_MutS_con_dom
description: DNA mismatch repair protein MutS, connector domain

phrase: QRIWLITGPNMAGKSTFLRQNAIIVILAQIGCYVPAQSAQIGVVDKLFSRIGAADDLASGQSTFMVEMVETSVILAQSTFMSLVILDEIGRGTSTYDGISIAWSCLEYIHSNIRCRCLFATHYHELVDLASKLLSLKNFTVKIHDSNDKLSFLYKIIEGAANKSYGIHVAELAGLPRIVLNRAKEIL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: SARKNLELTSTLSGNFKGSLLSIIDATVTNQGGRLLHKFLSTPLAEVNLINSRLQITDFFYQNLQLVENLRQLVKLVPDIERALSRILIAKALPKDLESIKISLKIALSIKKELNKVLEEGNTPKYLEEIYNPLFGDNELYELLDSALLDDLSNSANDCGFIKSSYSTKLEELRNLIHNSSNFIEQLKLQYRQETCIETLKICHNNVWGMFIEVSSKNAHKITDSKFVHKQTTTTAVRFTTTELQTLEAKMLNAKTMAAALEQEILAELCKAISLKSEKLSHLAKSISLIDVFCNF
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core
Protein sequence:
MAKRTKSSSRWLQRQNKDYFVRAAQDQGQVSRAHFKLLQLDQRYKLIKPQARVLELGAAPGGWTQYLQDRLSKGLLIAVDPLPITAGMDTVVIEGRAGETEVDEAIEQALQGDTLDLVLSDMAPNISGVRAVDQARAMDLADTALLACHRWLKPRGAMAIKAFQGEGLDQWVKDLRRQFAKVTDNPLSDMGKNLLLWLIIAAVLLTVFNNFNVEPQQEPVAYSEFVKAVNAGQIREAQIQGDKITALDGSGNRMVVVWPQNDDKLISELIDNNVVTTVLEPEKQSFWSQLLIASFPILIIIAVFMLFMRQMQGGGSGRGGPMAFGRSKAKLLSEDQIKTTFADVAGVDEAKEEVQELVEFLRDPGKFQRLGGHIPRGVLMVGQPGTGKTLLAKAIAGEAKVPFFSISGSDFVEMFVGVGASRVRDMFEQAKKQSPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFEANDGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDIRGREQIVKVHMRKVPLADDVEPGIIARGTPGFSGADLANLVNEAALFAARGGKRLVSMEEFDKAKDKIMMGAERKSMVMSEKEKRNTAYHEAGHAIIGRLMPDHDPVYKVSIIPRGRALGVTMFLPEEDRYSLTRQGIRSQICSLFGGRIAEEMILGPEYVTTGASNDIERATSLARSMVTKWGLSERLGPLKYDEDDNEVFLGMSAGVKPKALSDDTAKAIDEEVRSIIDTCYATAHDMLEENIDKLHSMADA

Annotated regions:
phrase: VLMVGQPGTGKTLLAKAIAGEAKVPFFSISGSDFVEMFVGVGASRVRDMFEQAKKQSPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFEANDGIIVIAATNRPDVLDPALLRPGRFDRQVVV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: MVMSEKEKRNTAYHEAGHAIIGRLMPDHDPVYKVSIIPRGRALGVTMFLPEEDRYSLTRQGIRSQICSLFGGRIAEEMILGPEYVTTGASNDIERATSLARSMVTKWGLSERLGPLKYDEDDNEVFLGMSAGVKPKALSDDTAKAIDEEVRSIIDTCYATAHDMLEENIDKLHSMA
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: VSRAHFKLLQLDQRYKLIKPQARVLELGAAPGGWTQYLQDRLSKGLLIAVDPLPITAGMDTVVIEGRAGETEVDEAIEQALQGDTLDLVLSDMAPNISGVRAVDQARAMDLADTALLACHRWLKPRGAMAIKAFQGEGLDQWVKDLRRQFAK
type: DOMAIN
name: RNA_MeTrfase_FtsJ_dom
description: Ribosomal RNA methyltransferase, FtsJ domain

phrase: LLLWLIIAAVLLTVFNNFNVEPQQEPVAYSEFVKAVNAGQIREAQIQGDKITALDGSGNRMVVVWPQNDDKLISELIDNNVVT
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular

phrase: IIVIAATNRPDVLDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: IPRGVLMVGQPGTGKTLLAKAIAGEAKVPFFSISGSDFVEMFVGVGASRVRDMFEQAKKQSPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFEANDGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: IIARGTPGFSGADLANLVNEAALFAARGGKRLVSMEEFD
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain
Protein sequence:
MRTVVLSGFMATGKSTIGRLVAEKLGLPFLDTDAILAEEVGRPVGEIFAAEGEARFRDHEARIIQPLLADGVPRVLSFGGGSMTIPRVRHAALEAATVVTLTATPETIAARVPSPTDRPNLGAASVLDRARDLIALRREVYGECHASIATDGRAPEEIAACIVELARRDTVAIPLGVRSYVVELTHGRPDVLGAALKELAPSSIVTVTDENLVTMRGAWLDAALASLGLRETRIVLSPGEANKTLASISRIWDAALSEGVDRQAVVVAFGGGVAGDLAGFAASTLLRGVRCVQVPTSLLSMVDSSVGGKTGFDHAAGKNLLGAFFQPSRVVIDLEHLKTLPPRERRAGLAEVVKIALVREPPLLELLESRAEAIARGDRDVLRDVVRASVIAKMRVVREDEHETGARALLNLGHTLGHALESHGGYARWLHGEAVAIGTVLEIAAAERLGLTPAGTSERAASLFERFGLPTTVDLATVDAAWPYVMSDKKRTLSAVKLPVVTGPGEGRVERVELDALRAAVTGAE

Annotated regions:
phrase: RDHEARIIQPLLADGVPRVLSFGGGS
type: CONSERVED_SITE
name: Shikimate_kinase_CS
description: Shikimate kinase, conserved site

phrase: GLAEVVKIALVREPPLLELLESRAEAIARGDRDVLRDVVRASVIAKMRVVREDEHETGARALLNLGHTLGHALESHGGYARWLHGEAVAIGTVLEIAAAERLGLTPAGTSERAASLFERFGLPTTVDLATVDAAWPYVMSDK
type: DOMAIN
name: DHQS_C
description: 3-dehydroquinate synthase, C-terminal domain

phrase: IVLSPGEANKTLASISRIWDAALSEGVDRQAVVVAFGGGVAGDLAGFAASTLLRGVRCVQVPTSLLSMVDSSVGGKTGFDHAAGKNLLGAFFQPSRVVIDLEHLKTLPPRE
type: DOMAIN
name: DHQS/DOIS_N
description: 3-dehydroquinate synthase, N-terminal domain
Protein sequence:
MARNSIKKSPVVKKKDTPIVRKRKPIQQEAEEDSNDEESEDELNVEGLIDASDDEDEEEEQEQEEQPQEEENNSDDDDDDDDDDDDNNSEADSEEELNQLLGEEEEEDPSDYNSDEFSDEPKDDDLSRINIKSLSVSDPSIQKNSISKFSDGSIRILKPEIEPKYDSDDSDAENFNTIGNIPISAYDEMPHIGYDINGKRIMRPAKGSALDQLLESIDLPEGWTGLLDQNTGTSLKLTDEELELIRKIQQQENTDENINPYEPLIDWFTKDEEIMPVTAVPEPKRRFVPSKHEAKRVMKIVKAIREGRIIPPNKVKQQLTEEEEEDQFNFDLWQDEIEISDHIMNLRAPKLPPPTNEESYNPPEEYLLTEEEKSKWLQESPIDRERNFLPQKYNSLRQVPGYQDSVRERFERSLDLYLAPRVRHNKLNIDPDSLIPDLPSPKDLRPFPIRCSTIYEGHTGKIRTISIDPQGLWLATGSDDGSVRIWEILTGRQVYKIQLINKEINNEDHIECLEWNPDSSCGILAVCVGENIYLIVPPIFGFDIENSGKLRIESGWGYDTFGNKKKDLKISSQKEEDNKESDNEDEDEEEDNDDDDDDDEPETSSTVEPKKEVAKWYPPNTEQASMGISAIIQCRKTIKKLSWHRKGDYFVTVSPDSKNTAVLIHQISKHLSQSPFKKSKGIIMDAKFHPFKPQLFVASQRQIKIYDLAQQVLLKKLMPGVRLLSTIDIHPRGDNLIAGSYDKRVLWHDLDLSATPYKTLRYHEKAVRSIKFHKGNLPLFASASDDGNIHIFHGTVYDDLMTNPLLVPLKKLNGHKIINQIGILDLIWHPKEPWLFSAGADGTARLWTT

Annotated regions:
phrase: ILDLIWHPKEPWLFSAGADGTARLWT
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: YDEMPHIGYDINGKRIMRPAKGSALDQLLESIDLPEGWTGLLDQNTGTSLKLTDEELELIRKIQQQENTDENINPYEPLIDWFTKDEEIMPVTAVPEPKRRFVPSKHEAKRVMKIVKAIREGRIIPPNKVKQQLTEEEEEDQFNFDLWQDEIEISDHIMNLRAPKLPPPTNEESYNPPEEYLLTEEEKSKWLQESPIDRERNFLPQKYNSLRQVPGYQDSVRERFERSLDLYLAPRVRHNKLNIDPDSLIPDLPSPKDLRPF
type: DOMAIN
name: BOP1_N_dom
description: BOP1, N-terminal domain

phrase: RCSTIYEGHTGKIRTISIDPQGLWLATGSDDGSVRI
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: TPYKTLRYHEKAVRSIKFHKGNLPLFASASDDGNIHI
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: PLKKLNGHKIINQIGILDLIWHPKEPWLFSAGADGTARL
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: QQVLLKKLMPGVRLLSTIDIHPRGDNLIAGSYDKRVLWH
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: KHLSQSPFKKSKGIIMDAKFHPFKPQLFVASQRQIKIY
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: SMGISAIIQCRKTIKKLSWHRKGDYFVTVSPDSKNTAVLIH
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: SATPYKTLRYHEKAVRSIKFHKGNLPLFASASDDGNIHIF
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LLVPLKKLNGHKIINQIGILDLIWHPKEPWLFSAGADGTARLW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: PIRCSTIYEGHTGKIRTISIDPQGLWLATGSDDGSVRIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: TGRQVYKIQLINKEINNEDHIECLEWNPDSSCGILAVCVGENIYLI
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: YEGHTGKIRTISIDPQGLWLATGSDDGSVRIWEILTGRQVY
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: YDEMPHIGYDINGKRIMRPAKGSALDQLLESIDLPEGWTGLLDQNTGTSLKLTDEELELIRKIQQQENTDENINPYEPLIDWFTKDEEIMPVTAVPEPKRRFVPSKHEAKRVMKIVKAIREGRIIPPNKVKQQLTEEEEEDQFNFDLWQDEIEISDHIMNLRAPKLPPPTNEESYNPPEEYLLTEEEKSKWLQESPIDRERNFLPQKYNSLRQVPGYQDSVRERFERSLDLYLAPRVRHNKLNIDPDSLIPDLPSPKDLRPF
type: DOMAIN
name: BOP1_N_dom
description: BOP1, N-terminal domain

phrase: LATGSDDGSVRIWE
type: CONSERVED_SITE
name: WD40_repeat_CS
description: WD40 repeat, conserved site
Protein sequence:
MKKIGLLFMLCLAALFTIGFPAQQADAAEAPYKASITNISTDGGVYGKINYGQGQYWRVKYNITVSGKLLDQNGQPVPNAPVRFEADTKVGNTTQTASGTTDANGTFEVPMYLGPAAGYYTYYTSVSVHYYDIIPFRVFSGESRLVSTDNSLYHFAYQVRR

Annotated regions:
Protein sequence:
MFLVGLTGGIASGKSTVVSILRELGCAVIDADLIARQVVRLGTPAYSQIVQHFGDGVLLVSGELDREKLGAIIFSDPEKRCVINSITHPQIRREMLRQTLWYFFLGYRYVILDIPLLFESRSMTRYMKHTMLVYCDPQTQLERLMRRNSLSRDEATKRIAAQLPLDSKLPLADHVIDNSGDRDNTRRQVLQLHARLESSLAYLPVRITAATVATGLVVLACGLLRRLWQ

Annotated regions:
Protein sequence:
MVAVSGTQHTRTVSPTRWIVYAGSVFAGAWLATQLFYLAQIALWSFVNPGSTAFMRTDAWWLSRDKPPAQIQHQWVPYDQISRNLKRALIASEDSTFATNNGYDVDAILQAWEKNKARGRIVAGGSTITQQLARNLFLSREKSYIRKGQELIITWMLETVLDKERIFEIYLNSVEWGRGVYGAEAAARYYYRIPASRLGAWQSARLAVMLPKPRWFDAHRGSAYQAQRAAVIARRMGAAELPQSE

Annotated regions:
phrase: QIQHQWVPYDQISRNLKRALIASEDSTFATNNGYDVDAILQAWEKNKARGRIVAGGSTITQQLARNLFLSREKSYIRKGQELIITWMLETVLDKERIFEIYLNSVEWGRGVYGAEAAARYYYRIPASRLGAWQSARLAVMLPKPRWFDAHRGSAYQAQRAAVIARR
type: DOMAIN
name: Glyco_trans_51
description: Glycosyl transferase, family 51
Protein sequence:
MTADAPITQDVLTIPRKDLPQDGRANLLGLSRGALRDALIAAGTPEKQARMRTGQIWQWIYHWGVRDFSAMTNLAKDYRALLAEQFVIALPEVVSRQISEDGTRKYLVRIAGGHEVETVYIPEEDRGTLCISSQVGCTLTCSFCHTGTQKLVRNLTAGEIVGQIMLARDDLGEWPEPGVGTGESGPRLLSNIVLMGMGEPLYNFDAVRDAMKIAMDGEGIALSRRRITLSTSGVVPEIARTAEEIGCMLAVSFHATTDEVRNKLVPINKRWNIAELLDALRAYPKLSNSERITFEYVMLKDVNDSDEDARRLVKLISGIPAKINLIPFNEWPGAPYQRSDKGRIAAFADIIYKAGYASPIRTPRGEDIMAACGQLKSATERARKSRAQIAAETAGQ

Annotated regions:
phrase: SSQVGCTLTCSFCHTGTQKLVRNLTAGEIVGQIMLARDDLGEWPEPGVGTGESGPRLLSNIVLMGMGEPLYNFDAVRDAMKIAMDGEGIALSRRRITLSTSGVVPEIARTAEEIGCMLAVSFHATTDEVRNKLVPINKRWNIAELLDALRAYPKLSNSERITFEYVMLKDVNDSDEDARR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: EEDRGTLCISSQVGCTLTCSFCHTGTQKLVRNLTAGEIVGQIMLARDDLGEWPEPGVGTGESGPRLLSNIVLMGMGEPLYNFDAVRDAMKIAMDGEGIALSRRRITLSTSGVVPEIARTAEEIGCMLAVSFHATTDEVRNKLVPINKRWNIAELLDALRAYPKLSNSERITFEYVMLKDVNDSDEDARRLVKLISGIPAKINLIPFNEWPGAPYQRSDKGRIAAFADIIYKAGYASPIRTPRGE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: GRANLLGLSRGALRDALIAAGTPEKQARMRTGQIWQWIYHWGVRDFSAMTNLAKDYRALLAEQFVIALPEVVSRQISEDGTRKYLVRIAGGHEVETVYIPEEDRGTLCISSQVGCTLTCSFCHTGTQKLVRNLTAGEIVGQIMLARDDLGEWPEPGVGTGESGPRLLSNIVLMGMGEPLYNFDAVRDAMKIAMDGEGIALSRRRITLSTSGVVPEIARTAEEIGCMLAVSFHATTDEVRNKLVPINKRWNIAELLDALRAYPKLSNSERITFEYVMLKDVNDSDEDARRLVKLISGIPAKINLIPFNEWPGAPYQRSDKGRIAAFADIIYKAGYASPIRTPRGEDIMAACGQLKSATERARKSR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: NLLGLSRGALRDALIAAGTPEKQARMRTGQIWQWIYHWGVRDFSAMTNLAKDYRALLAEQFV
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MNFSVGLGRDDAEKRLVQNGVSRRDFMKFCATVAAAMGMGPAFAPKVAEALTAKHRPSVVWLHNAECTGCTEAAIRTIKPYIDALILDTISLDYQETIMAAAGEAAEAALHQALEGKDGYYLVVEGGLPTIDGGQWGMVAGHPMIETTKKAAAKAKGIICIGTCSAYGGVQKAKPNPSQAKGVSEALGVKTINIPGCPPNPINFVGAVVHVLTKGIPDLDENGRPKLFYGELVHDNCPRLPHFEASEFAPSFDSEEAKKGFCLYELGCKGPVTYNNCPKVLFNQVNWPVQAGHPCLGCSEPDFWDTMTPFYEQG

Annotated regions:
phrase: MNFSVGLGRDDAEKRLVQNGVSRRDFMKFCATVAAAMGMGPAFAPKVAE
type: CONSERVED_SITE
name: TAT_signal
description: Twin-arginine translocation pathway, signal sequence

phrase: CTGCTEAAIRTIKPYIDALILDTISLDYQETIMAAAGEAAEAALHQALEGKDGYYLVVEGGLPTIDGGQWGMVAGHPMIETTKKAAAKAKGIICIGTCSAYGGVQKAKPNPSQAKGVSEALGVKTINIPGCPPNPINFVGAVV
type: DOMAIN
name: NADH_UbQ_OxRdtase-like_20kDa
description: NADH:ubiquinone oxidoreductase-like, 20kDa subunit

phrase: VSRRDFMKFCATVAAAMGMGPAFAPKVAE
type: CONSERVED_SITE
name: TAT_signal_bac_arc
description: Twin-arginine translocation pathway, signal sequence, bacterial/archaeal

phrase: YGELVHDNCPRLPHFEASEFAPSFDSEEAKKGFCLYELGCKGPVTYNNCPKVLFNQVNWPVQAGHPCLGCSEPDFWDTMTPF
type: DOMAIN
name: Cytochrome-c3_hydrogenase_C
description: Cytochrome-c3 hydrogenase, C-terminal