nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTNIRKTHPLMKILNKTFIDLPTPSNISSWWNFGSLLGLCLTVQILTGLFLAMHYTPDTSTAFSSITHICRDVNYGWMIRHLHANGASMFFICLYIHIGRGLYYGSYLFKKTWNIGVLLLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWVWGGFSVDKATLTRFFALHFILPFIIVALTTVHLLFLHETGSNNPMGIPSNMDKIPFHPYHTIKDILGALLLMFVLLTLTLLAPDLLGDPDNYTPANPLNTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILLFIPLLHTSKQRSMMFRPLSQLLFWLLMTDLLVLTWIGGQPVEHPYIIMGQLASILYFLLILVMMPTASFIENKILKW

Annotated regions:
phrase: PANPLNTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILLFIPLLHTSKQRSMMFRPLSQLLFWLLMTDLLVLTWIGGQPVEHPYIIMGQLASILY
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: PLMKILNKTFIDLPTPSNISSWWNFGSLLGLCLTVQILTGLFLAMHYTPDTSTAFSSITHICRDVNYGWMIRHLHANGASMFFICLYIHIGRGLYYGSYLFKKTWNIGVLLLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWVWGGFSVDKATLTRFFALHFILPFIIVALTTVHLLFLHETGS
type: DOMAIN
name: Cytochrome_b_N_euk/bac
description: Cytochrome b/b6, N-terminal domain, eukaryotic/bacterial

phrase: GIPSNMDKIPFHPYHTIKDILGALLLMFVLLTLTLLAPDLLGDPDNYTPANPLNTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILLFIPLLHTSKQRSMMFRPLSQLLFWLLMTDLLVLTWIGGQPVEHPYIIMGQLASILYFLLILVMMPTASFIENKILK
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: NPMGIPSNMDKIPFHPYHTIKDILGALLLMFVLLTLTLLAPDLLGDPDNYTPANPLNTPAHIKPEWYFLFAYAILRSIPNKLGGVLALLFSILILLFIPLLHTSKQRSMMFRPLSQLLFWLLMTDLLVLTWIGGQPVEHPYIIMGQL
type: DOMAIN
name: Cytochrome_b_C_euk/bac
description: Cytochrome b/b6, C-terminal domain, eukaryotic/bacterial

phrase: MTNIRKTHPLMKILNKTFIDLPTPSNISSWWNFGSLLGLCLTVQILTGLFLAMHYTPDTSTAFSSITHICRDVNYGWMIRHLHANGASMFFICLYIHIGRGLYYGSYLFKKTWNIGVLLLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWVWGGFSVDKATLTRFFALHFILPFIIVALTTVHLLFLHETGSNNP
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: IDLPTPSNISSWWNFGSLLGLCLTVQILTGLFLAMHYTPDTSTAFSSITHICRDVNYGWMIRHLHANGASMFFICLYIHIGRGLYYGSYLFKKTWNIGVLLLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWVWGGFSVDKATLTRFFALHFILPFIIVALTTVHLLFLHET
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain
Protein sequence:
MNDAKYGVLLVNLGTPDAPQPDAVKRYLAQFLSDPRVVDVSPWIWKPILHGVILPFRSPKVAKLYQQIWLPDGSPLLVYSRAQQKALAQRFAHIPVELGMCYGNPSLNEGLTRLLAQGVEKLIVLPLYPQYSCSTSGAVFDGISQLFKTMRTIPSLHFVRSYAQHPLYIKALVNSIDESFKQHGKPDRLVLSFHGIPERFIKTGDIYFDECCLTVEKLKQQLDYPAEKVMMTFQSRFGREPWLSPYTDKTMEKLGSEGVEHVQVICPGFSSDCLETLEEINEQNREFFIHGGGKQYEYIPALNDKVEHIDLLEAIIRDICEK

Annotated regions:
phrase: YGVLLVNLGTPDAPQPDAVKRYLAQFLSDPRVVDVSPWIWKPILHGVILPFRSPKVAKLYQQIWLPDGSPLLVYSRAQQKALAQRFAHIPVELGMCYGNPSLNEGLTRLLAQGVEKLIVLPLYPQYSCSTSGAVFDGISQLFKTMRTIPSLHFVRSYAQ
type: DOMAIN
name: Ferrochelatase_N
description: Ferrochelatase, N-terminal

phrase: KALVNSIDESFKQHGKPDRLVLSFHGIPERFIKTGDIYFDECCLTVEKLKQQLDYPAEKVMMTFQSRFGREPWLSPYTDKTMEKLGSEGVEHVQVICPGFSSDCLETLEEINEQNREFFIHGGGKQYEYIPAL
type: DOMAIN
name: Ferrochelatase_C
description: Ferrochelatase, C-terminal

phrase: LVLSFHGIPERFIKTGDI
type: ACTIVE_SITE
name: Ferrochelatase_AS
description: Ferrochelatase, active site
Protein sequence:
MNEVVQSPAIQPLPKSAPTAGKQNLLDLDRAGLEKFFVEVLGEKKFRAHQVMKWIHHRYVTDFDEMTDLGKVLRAKLQAHAEVLVPNIVFDKPSADGTHKWLLAMGVDGKNAIETVYIPDKTRGTLCVSSQVGCGLNCTFCSTATQGFNRNLTTAEIIGQVWVAARHLGNVPHQMRRLTNVVMMGMGEPLMNFDNVVRAMSVMRDDLGYGLANKRVTLSTSGLVPQIDRLSAESDVSLAVSLHAPNDALRETLVPLNKKYPIAELMASCARYLRANKRRESVTFEYTLMKGINDKPEHARELARLMRQFDNAVQAKDSGKVNLIPFNPFPGTRYERSEEAHIRAFQKILLDSNVLTMVRRTRGDDIDAACGQLKGQVMDRTRRQAEFNKTLQAGKGSDAAA

Annotated regions:
phrase: DKTRGTLCVSSQVGCGLNCTFCSTATQGFNRNLTTAEIIGQVWVAARHLGNVPHQMRRLTNVVMMGMGEPLMNFDNVVRAMSVMRDDLGYGLANKRVTLSTSGLVPQIDRLSAESDVSLAVSLHAPNDALRETLVPLNKKYPIAELMASCARYLRANKRRESVTFEYTLMKGINDKPEHARELARLMRQFDNAVQAKDSGKVNLIPFNPFPGTRYERSEEAHIRAFQKILLDSNVLTMVRRTRGD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: NLLDLDRAGLEKFFVEVLGEKKFRAHQVMKWIHHRYVTDFDEMTDLGKVLRAKLQAHAE
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: SSQVGCGLNCTFCSTATQGFNRNLTTAEIIGQVWVAARHLGNVPHQMRRLTNVVMMGMGEPLMNFDNVVRAMSVMRDDLGYGLANKRVTLSTSGLVPQIDRLSAESDVSLAVSLHAPNDALRETLVPLNKKYPIAELMASCARYLRANKRRESVTFEYTLMKGINDKPEHAR
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
LPICPSGSVNCQVSLGELFDRAVKLSHYIHFLSSEMFNEFDERYAQGRGFITKAVNGCHTASLTTPEDKEQAQQIHHEDLLNLVLGVLRSWNDPLLHLVTEVQRIKEAPDTILWKAVEIEEQNKRLLEGMEKIIGRVQPGDTGNEVYSRWSGLPSLQLADEDSRLFAFYNLLHCGRRDSHKIDNYLKLLKCRLIHDSNC

Annotated regions:
phrase: CHTASLTTPEDKEQAQQIHHEDLLNLVLGVLRS
type: CONSERVED_SITE
name: Somatotropin_CS
description: Somatotropin hormone, conserved site
Protein sequence:
MKNLASREVNIYVNGKLVGTTDKPEELVNFIREKRRKGELPQYTTVAYNEESNDIHINTDAGRIVRPLIVVENGKPKLTKEHIEKLKKGEITFSDLVKEGVIEYLDAEEEENAYIALSEEELTEKHTHLEIDPLTILGIGAGVAPYPEHNSAPRITMAAAMGKQSLGIPMSNIKWRLDTRGHYLHYPQVPIVRTKHQEILGFDKRPAGQNFVVAIMSYEGYNMEDAIVFNKSAIDRGLGRSTFFRTYDACERRYPGGQMDRFEIPDKGVRGYRSEECYRYLEEDGIVAVESHVKGGDVIVGKTSPPRFLEEHEITIQVKPQRRDSSVVVRHGEEGYIDKVILTETKEGNRLVKVKVRDLRIPELGDKFASRHGQKGVMGLTVPQEDLPFTESGIVPDIIINPHAIPSRMTVGQLLEMLGGKVGALEGRRIDGTIFSGEKEWDLRKALEALGFKHHGKEVMYDGKTGKKFEVEIYIGIAYYQKLHHLVAGKIHARSRGPVQVLTRQPTEGRAREGGLRFGEMERDVLIGHGAAMLLKERLMDESDPYDICICSKCGDFAILDYKRGLKYCPICGEIENLYSSKKIPFVRIPYAFKLLLDELKSMCILPRIKVRDKVELEDFEEFVEKLEKEKVKQKQ

Annotated regions:
phrase: GGLRFGEMERDVLIGHGAAMLLKERLMDESDPYDICICSKCGDFAILDYKRGLKYCPICGEIENLYSSKKIPFVRIPYAFKLLLDELKSMCILPRI
type: DOMAIN
name: RNA_pol_Rpb2_7
description: RNA polymerase Rpb2, domain 7

phrase: IYVNGKLVGTTDKPEELVNFIREKRRKGELPQYTTVAYNEESNDIHINTDAGRIVRPLIVV
type: DOMAIN
name: RNA_pol_Rpb2_4
description: RNA polymerase Rpb2, domain 4

phrase: AGVAPYPEHNSAPRITMAAAMGKQSLGIPMSNIKWRLDTRGHYLHYPQVPIVRTKHQEILGFDKRPAGQNFVVAIMSYEGYNMEDAIVFNKSAIDRGLGRSTFFRTYDACERRYPGGQMDRFEIPDKGVRGYRSEECYRYLEEDGIVAVESHVKGGDVIVGKTSPPRFLEEHEITIQVKPQRRDSSVVVRHGEEGYIDKVILTETKEGNRLVKVKVRDLRIPELGDKFASRHGQKGVMGLTVPQEDLPFTESGIVPDIIINPHAIPSRMTVGQLLEMLGGKVGALEGRRIDGTIFSGEKEWDLRKALEALGFKHHGKEVMYDGKTGKKFEVEIYIGIAYYQKLHHLVAGKIHARSRGPVQVLTRQPTEGRA
type: DOMAIN
name: DNA-dir_RNAP_su2_dom
description: DNA-directed RNA polymerase, subunit 2, hybrid-binding domain

phrase: GDKFASRHGQKG
type: CONSERVED_SITE
name: RNA_pol_bsu_CS
description: RNA polymerase, beta subunit, conserved site

phrase: FSDLVKEGVIEYLDAEEEENAYIALSEEELTEK
type: DOMAIN
name: RNA_pol_Rpb2_5
description: RNA polymerase Rpb2, domain 5
Protein sequence:
MAPQQNGAEVDGIHTGKIYSVSGPVVVAEDMIGVAMYELVKVGHDQLVGEVIRINGDQATIQVYEETAGVMVGDPVLRTGKPLSVELGPGLLNNIYDGIQRPLEKIAEASNSIYIPRGIATPALDRKKKWEFTPTMKVGDHIAGGDVWGTVYENSFISVHKILLPPRARGTITRIAEKGEYTVEEKILEVEFDGKKTEYPMMQTWPVRVPRPAAEKHSANQPFLVGQRVLDALFPSVQGGTVAIPGAFGCGKTVISQSVSKFSNSDVIVYVGCGERGNEMAEVLKDFPELSIEVDGRKEPIMKRTTLIANTSNMPVAAREASIYTGITVAEYFRDQGMNVAMMADSSSRWAEALREISGRLGEMPADQGFPAYLGAKLASFYERAGKVQALGSPPREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINTSVSYSKYLTILDKWYEREYPDFPRLRDRIRQLLSDSEELDQVVQLVGKSALSDPDKITLDMATLIKEDFLQQNGYSDYDQFCPIWKTEWMMKLMMGFHDEAQKAIAQGQNWNKVREATQDLQAQLKSLKFEVPSEGQEKICKKYEAIQQQMLDKFASVIDE

Annotated regions:
phrase: TPALDRKKKWEFTPTMKVGDHIAGGDVWGTVYENSFISVHKILLPPRARGTITRIAEKGEYTVEEKILEVEFDGKKTEYPMMQTWPV
type: DOMAIN
name: ATP-synth_a_Xtn
description: ATPsynthase alpha/beta subunit, barrel-sandwich domain

phrase: IYSVSGPVVVAEDMIGVAMYELVKVGHDQLVGEVIRINGDQATIQVYEETAGVMVGDPVLRT
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_N
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain

phrase: WYEREYPDFPRLRDRIRQLLSDSEELDQVVQLVGKSALSDPDKITLDMATLIKEDFLQQNGYSDYDQFCPIWKTEWMMKLMMGFHDEAQKAIAQGQNWNK
type: DOMAIN
name: ATP-synt_VA_C
description: ATP synthase A/B type, C-terminal domain

phrase: PSINTSVSY
type: ACTIVE_SITE
name: ATPase_a/bsu_AS
description: ATPase, alpha/beta subunit, nucleotide-binding domain, active site

phrase: GQRVLDALFPSVQGGTVAIPGAFGCGKTVISQSVSKFSNSDVIVYVGCGERGNEMAEVLKDFPELSIEVDGRKEPIMKRTTLIANTSNMPVAAREASIYTGITVAEYFRDQGMNVAMMADSSSRWAEALREISGRLGEMPADQGFPAYLGAKLASFYERAGKVQALGSPPREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSINTSVSY
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_nucl-bd
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain
Protein sequence:
MDNQAERESEAGVGLQRDEDDAPLCEDVELQDGDLSPEEKIFLREFPRLKEDLKGNIDKLRALADDIDKTHKKFTKANMVATSTAVISGVMSLLGLALAPATGGGSLLLSTAGQGLATAAGVTSIVSGTLERSKNKEAQARAEDILPTYDQEDREDEEEKADYVTAAGKIIYNLRNTLKYAKKNVRAFWKLRANPRLANATKRLLTTGQVSSRSRVQVQKAFAGTTLAMTKNARVLGGVMSAFSLGYDLATLSKEWKHLKEGARTKFAEELRAKALELERKLTELTQLYKSLQQKVRSRARGVGKDLTGTCETEAYWKELREHVWMWLWLCVCLCVCVYVQFT

Annotated regions:
Protein sequence:
MAGALSLRCRTGCTGGCEYGHKGKCRDSSLLSKRLSEDSSRHQLLQKWTSMWRSTSEDASVADTEKARLEEAAAAAEERPLVFLCSGCRRPLGDSLSWVTSQEDTNCILLRCVSCNVSVDKEQKLSKREKENGCILETLHCTGCSLNLGYVYRCTPKNLDYKRDLFCLNVEAVESYVLGSSEKQIVSEDKELFNLESRVEIEKSLKQMEDVLQALQMKLWEVESKLSFATCKS

Annotated regions:
phrase: LVFLCSGCRRPLGDSLSWVTSQEDTNCILLRCVSCNVSVDKEQKLSKREKENGCILETLHCTGCSLNLGYVYRCTPKNLDYKRDLFCLNVEAVESYVLGSSEKQI
type: DOMAIN
name: Yippee/Mis18/Cereblon
description: Yippee/Mis18/Cereblon

phrase: PLVFLCSGCRRPLGDSLSWVTSQEDTNCILLRCVSCNVSVDKEQKLSKREKENGCILETLHCTGCSLNLGYVYRCTPKNLDYKRDLFCLNVEAVESYV
type: DOMAIN
name: Mis18
description: Mis18 domain
Protein sequence:
MSEYLQQIAKRRTFAIISHPDAGKTTITEKMLLFGNAIKTAGTVKAKKSGIYATSDWMEMEKQRGISITTSVMQFPYNGRIINLLDTPGHEDFSEDTYRTLTAVDSALMVVDAVKGVEDRTIKLMNVCRLRDTPIVTFMNKFDRDTRDPLELLDEVENILKIKCAPMNWPIGMGKYFKGVYDLYNDEVTLFETGHGHEIYPYKKIKGLANAKDAIGIDLYEDLEMEIDLVRGASHEFDEQEFLEGNLTPVYFGTALSNFGVKEMMDGFTRYAPAPQHREADQRVVAADEQKLTGFVFKIQANMDEKHRNRIAFFRICSGKYEKGMKIFHERTGKQMQISKALTFMAGEREQVEEGYAGDIIGLHNHGSIQIGDSFTQGEKLKFKGIPNFAPEIFKRVKLNDPLKMKALQKGLVQLSEEGATQVFKPFISNDLVLGAVGVLQFDVVAQRLASEYNVKCSYEGVNVTLARWIFCSDEKKLNDFKKKYEVNLAYDGAGYLTYLAPTGVNLQLAQEKNPDIIFSATREH

Annotated regions:
phrase: AKRRTFAIISHPDAGKTTITEKMLLFGNAIKTAGTVKAKKSGIYATSDWMEMEKQRGISITTSVMQFPYNGRIINLLDTPGHEDFSEDTYRTLTAVDSALMVVDAVKGVEDRTIKLMNVCRLRDTPIVTFMNKFDRDTRDPLELLDEVENILKIKCAPMNWPIGMGKYFKGVYDLYNDEVTLFETGHGHEIYPYKKIKGLANAKDAIGIDLYEDLEMEIDLVRGASHEFDEQEFLEGNLTPVYFGTALSNFGVKEMMDGFTRYAPAP
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: TFAIISHPDAGKT
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: QRGISITT
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: NLLDTPGHED
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: RTLTAVDSALM
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: IVTFMNKFD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: LTGFVFKIQANMDEKHRNRIAFFRICSGKYEKGMKIFHERTGKQMQISKALTFMAGEREQVEEGYAGDIIGLHNHGSIQIGDSFT
type: DOMAIN
name: EF-G-like_DII
description: Elongation factor G-like, domain II

phrase: KRRTFAIISHPDAGKTTITEKMLLFGNAIKTAGTVKAKKSGIYATSDWMEMEKQRGISITTSVMQFPYNGRIINLLDTPGHEDFSEDTYRTLTAVDSALMVVDAVKGVEDRTIKLMNVCRLRDTPIVTFMNKFDRDTRDPLELLDEVENILKIKCAPMNWPIGMGKYFKGVYDLYNDEVTLFETGHGHEIYPYKKIKGLANAKDAIGIDLYEDLEMEIDLVRGASHEFDEQEFLEGNLTPVYFGTALSNFGVKEMMDGFTRYAPA
type: DOMAIN
name: RF3_GTP-bd
description: Peptide chain release factor 3, GTP-binding domain

phrase: FKGIPNFAPEIFKRVKLNDPLKMKALQKGLVQLSEEGATQVFKPFISNDLVLGAVGVLQFDVVAQRLASEYNVKCSYEGVNVTLARWIFCSDEKKLNDFKKKYEVNLAYDGAGYLTYLAPTGVNLQL
type: DOMAIN
name: RF3_C
description: Peptide chain release factor 3, C-terminal

phrase: TFAIISHPDAGKTTITEKMLLFGNAIKTAGTVKAKKSGIYATSDWMEMEKQRGISITTSVMQFPYNGRIINLLDTPGHEDFSEDTYRTLTAVDSALMVVDAVKGVEDRTIKLMNVCRLRDTPIVTFMNKFDRDTRDPL
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: RRTFAIISHPDAGKTTITEKMLLFGNAIKTAGTVKAKKSGIYATSDWMEMEKQRGISITTSVMQFPYNGRIINLLDTPGHEDFSEDTYRTLTAVDSALMVVDAVKGVEDRTIKLMNVCRLRDTPIVTFMNKFDRDTRDPLELLDEVENILKIKCAPMNWPIGMGKYFKGVYDLYNDEVTLFETGHGHEIYPYKKIKGLANAKDAIGIDLYEDLEMEIDLVRGASHEFDEQEFLEGNLTPVYFGTALSNFGVKEMMDGFTRYA
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: DWMEMEKQRGISITT
type: CONSERVED_SITE
name: G_TR_CS
description: Tr-type G domain, conserved site
Protein sequence:
MLPTRDCVRQTPAYTPGEQPQTAGFTKLNTNENPYPPPAEIFAHLQEQLEKVRLYPDPISKELRQTAAELYGIAADQIIAGNGSDDILNIALRTFVNPCESVAFLDLTYSLYETIARVHGANIIEFPTNDKFALEGPIICPEAKLIFLASPNPPLGKHLDRDYLEATCANASGLVLIDEAYVDFSDDNHLDFLSRYDNVIISRTMSKSYSLAGLRVGFGFASRAIIEQMDKVRDSYNLDRIAQTLATAALKHHNYFEQVWQKVRQTRGRLITSLRELGFIVFDSEANFILASPPQISASELYNQLKERQILVRYFKHPRIQNYVRISIGTDGEIDRLLSAIQEIMGTN

Annotated regions:
phrase: TMSKSYSLA
type: BINDING_SITE
name: Aminotrans_II_pyridoxalP_BS
description: Aminotransferase, class-II, pyridoxal-phosphate binding site

phrase: TKLNTNENPYPPPAEIFAHLQEQLEKVRLYPDPISKELRQTAAELYGIAADQIIAGNGSDDILNIALRTFVNPCESVAFLDLTYSLYETIARVHGANIIEFPTNDKFALEGPIICPEAKLIFLASPNPPLGKHLDRDYLEATCANASGLVLIDEAYVDFSDDNHLDFLSRYDNVIISRTMSKSYSLAGLRVGFGFASRAIIEQMDKVRDSYNLDRIAQTLATAALKHHNYFEQVWQKVRQTRGRLITSLRELGFIVFDSEANFILASPPQISASELYNQLKERQILVRYFKHPRIQNYVRISIGTDGEIDRLLSA
type: DOMAIN
name: Aminotransferase_I/II_large
description: Aminotransferase, class I/classII, large domain
Protein sequence:
MRVKGIRKNCQHWWKGGILLLGILMICNAEDLWVTVYYGVPVWKEATTTLFCASDAKAYDTEAHNVWATHACVPTDPNPQEVNLENVTEDFDMWKNNMVEQMHEDVISLWDQSLKPCVKLTPLCVALNCTDANFTESASTTAHATMSSPTSTTARTTTSSANSSVEGGEMKNCSFYITTSMRDKAKEEYALFHTLDVVQSEDNSSYRLISCNTSVITQACPKISFEPIPIHYCAPAGFAILKCKDKQFNGTGPCKNVSTVQCTHGIRPVVSTQLLLNGSLAEEGVVIKSSNFSDNAKTIIVQLDEAVKMNCTRPGNNTSKSIHMGPGRAWYATERITGNIRQAHCNISRADWNNTLGKIAKKLIEQFNKTTINFTQPYPGGDPEITMFSFNCGGEFFYCNTTQLFNSTWYRNGTWSNNGTQNETEPITLPCRIKQIINMWQEVGRAMYAPPIRGNISCSSNITGLLLTRDGVSKTWDNDTFRPIGGNMKDNWRSELYKYKVVKIEPLGIAPTTAKRRVVQREKRAVGIGALFLGFLGAAGSTMGAASMTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVESYLRDQQLLGIWGCSGKLICTTAVPWNTSWSNKSLKQIWNDTTWIQWEREISNYTDLIYTLIEESQNQQEKNEQELLGLDKWASLWNWFDITKWLWYIKIFIMIVGGLIGLRIVFIVLSVVNRVRQGYSPLSFQTHLPAPRGPDRPEGIEEEGGERDRGRSGTLVNGFLAI

Annotated regions:
phrase: VQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVESYLRDQQLLGIWGCSGKLICTTAVPWNTSWSNKSLKQIWNDTTWIQWEREISNYTDLIYTLIEESQNQQEKNEQELLGLD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASMTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVESYLRDQQLLGIWGCSGKLICTTAVPWNTSWSNKSLKQIWNDTTWIQWEREISNYTDLIYTLIEESQNQQEKNEQELLGLDKWASLWNWFDITKWLWYIKIFIMIVGGLIGLRIVFIVLSVVNRVRQGYSPLSFQ
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKEATTTLFCASDAKAYDTEAHNVWATHACVPTDPNPQEVNLENVTEDFDMWKNNMVEQMHEDVISLWDQSLKPCVKLTPLCVALNCTDANFTESASTTAHATMSSPTSTTARTTTSSANSSVEGGEMKNCSFYITTSMRDKAKEEYALFHTLDVVQSEDNSSYRLISCNTSVITQACPKISFEPIPIHYCAPAGFAILKCKDKQFNGTGPCKNVSTVQCTHGIRPVVSTQLLLNGSLAEEGVVIKSSNFSDNAKTIIVQLDEAVKMNCTRPGNNTSKSIHMGPGRAWYATERITGNIRQAHCNISRADWNNTLGKIAKKLIEQFNKTTINFTQPYPGGDPEITMFSFNCGGEFFYCNTTQLFNSTWYRNGTWSNNGTQNETEPITLPCRIKQIINMWQEVGRAMYAPPIRGNISCSSNITGLLLTRDGVSKTWDNDTFRPIGGNMKDNWRSELYKYKVVKIEPLGIAPTTAKRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MASFKGFSVNTVPVSKAKRDISSLAATPGIRSQPFTPSVDMSQSREFLTKAIEQGSMSIPYQHVNVPKVDRKVVSLVVRPFSSGAFSISGVISPAHAYLLDCLPQLEQAMAFVASPESFQASDVAKRFAIKPGMSLQDAITAFINFVSAMLKMTVTRQNFDVIVAEIERLASTSVSVRTEEAKVADEELMLFGLDHRGPQQLDISNAKGIMKAADIQATHDVHLAPGVGNIDPEIYNEGRFMFMQHKPLAADQSYFTLETADYFKIYPTYDEHDSRMADQKQSGLILCTKDEVLAEQTIFKLDAPDDKTVHLLDRDDDHVVARFTKVFIEDVAPGHHAAQRSGQRSVLDDLYANTQVVSITSAALKWVVKHGVSDGIVNRKNVKVCVGFDPLYTLSTHNGVSLCALLMDEKLSVLNSACRMTLRSLMKTGRDADAHRAFQRVLSQGYASLMCYYHPSRKLAYGEVLFLERSSDMVDGIKLQLDASRQCHECPVLQQKVVELEKQIIMQKSIQSDPTPMALQPLLSQLRELSSEVTRLQMELSRTQSLNAQLEADAKSAQACSLDMYLRHHTCINGHTKEDELLDAVRVAPDVRKEIMEKRGEVRRGWCERISKEAAAKCQTVIDDLTQMNGKQAREITELRESAENYEKQIAELVGTITQNQMTYQQELQALVAKNVELDTMNQRQAKSLRITPSLLSATPIDSVDGAADLIDFSVPTDEL

Annotated regions:
Protein sequence:
MSGPLVNKHIVLGVTGSIASYKAIDLASKLTQAGALVDTILTYGATQFITPLAFRSITHRDVITDLYDLDSEFSNEHVALARRADIVTIVPATVNCIAKLAWGMADDPLTTTVVATEAPLLIAPAMDGNMYSHPATQDNLQILERRGVVIVGPDQGYLASGLSGKGRLVDPTQLVGHIAAALGKKGDLSGKKIVISAGGTQEPIDPVRVITNNSSGKMGYAIAEAARDRGAEVILITAPTTLSDPPSITVKNVTTAAEMCSLVLSEVTDSDALIMSAAVADYRPKTSAEQKIKKSNSGLTIDLTKTEDILEKATGNFVKVGFSAESENLVSNATEKIGRKSLDLIVANDITDPDSGFGKDTNKVVIIDDQLQAEHLPILTKYDVGNEILTRVLKVLATR

Annotated regions:
phrase: KHIVLGVTGSIASYKAIDLASKLTQAGALVDTILTYGATQFITPLAFRSITHRDVITDLYDLDSEFSNEHVALARRADIVTIVPATVNCIAKLAWGMADDPLTTTVVATEAPLLIAPAMDGNMYSHPATQDNLQILERRGVVIVGPDQGYLASGLSGKGRLVDPTQLVGHIA
type: DOMAIN
name: Flavoprotein
description: Flavoprotein

phrase: LSGKKIVISAGGTQEPIDPVRVITNNSSGKMGYAIAEAARDRGAEVILITAPTTLSDPPSITVKNVTTAAEMCSLVLSEVTDSDALIMSAAVADYRPKTSAEQKIKKSNSGLTIDLTKTEDILEKATGNFVKVGFSAESENLVSNATEKIGRKSLDLIVANDITDPDSGFGKDTNKVVI
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal
Protein sequence:
MATSAAAVQDEPATRFAKDQLKAIIERIERLEEEKKTISDDIRDVYAEAKGNGYDVKALRTIVRMRKQDANERAEQETILETYMQALGML

Annotated regions:
phrase: AKDQLKAIIERIERLEEEKKTISDDIRDVYAEAKGNGYDVKALRTIVRMRKQDANERAEQETILETYMQAL
type: DOMAIN
name: GapR-like_DNA-bd
description: GapR-like, DNA-binding domain
Protein sequence:
MSEAEARPTNFIRQIIDDDLASGKHTSVHTRFPPEPNGYLHIGHAKSIYLNFGIAQDYQGQCNLRFDDTNPVKEDMEYVDSIKHDVQWLGFNWSGDIHYSSDYFDKLHDYALELIDKGLAYVDQLSPDQIRDYRGTLTRPGKNSPYRDRSVEENRALFASMRQGEFAEGSACLRAKIDMASPFMVMRDPVLYRIKFADHHQTGSKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITINVHPRQYEFSRLNLEYAIMSKRKLNLLVTEKIVEGWDDPRMPTISGLRRRGYTAASIREFCRRIGVTKQDNNVEMAALEACIREDLNDRAPRAMAVIDPVRVVIESLPMGYEQDIAMPNHPNRPEMGTRQVAFSREIYIDRADFREEANKQYKRLVLGKEVRLRNAFVIKAEHVEKDPQGQITTIFCRHDPDTLSKDPADGRKVKGVIHWVSANRSLAAEFRLYDRLFSEANPAAAEDFLSTLNPDSLVIRQGFVEAGVPAANTGEPFQFEREGYFCADSRYFSPTHPVFNRTVGLRDTWAQRAAM

Annotated regions:
phrase: VHTRFPPEPNGYLHIGHAKSIYLNFGIAQDYQGQCNLRFDDTNPVKEDMEYVDSIKHDVQWLGFNWSGDIHYSSDYFDKLHDYALELIDKGLAYVDQLSPDQIRDYRGTLTRPGKNSPYRDRSVEENRALFASMRQGEFAEGSACLRAKIDMASPFMVMRDPVLYRIKFADHHQTGSKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITINVHPRQYEFSRLNLEYAIMSKRKLNLLVTEKIVEGWDDPRMPTISGLRRRGYTAASIREFCRRIGVTKQDNNVEMAALEACIREDL
type: DOMAIN
name: Glu/Gln-tRNA-synth_Ib_cat-dom
description: Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain

phrase: VIHWVSANRSLAAEFRLYDRLFSEANPAAAEDFLSTLNPDSLVIRQGFVEAGVPAANTGEPFQFEREGYFCA
type: DOMAIN
name: tRNA-synt_1c_C2
description: tRNA synthetases class I (E and Q), anti-codon binding domain

phrase: APRAMAVIDPVRVVIESLPMGYEQDIAMPNHPNRPEMGTRQVAFSREIYIDRADFREEANKQYKRLVLGKEVRLRNAFVIKAEHVEKDPQGQITTIFCR
type: DOMAIN
name: Glu/Gln-tRNA-synth_Ib_codon-bd
description: Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain

phrase: PEPNGYLHIGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site
Protein sequence:
MRIALIILAAGVGKRFNKDGTVPKQYIHLLGHPVIYHATKAFLPHVTCIQPVGDPDQLLSILAPLNSNKILPPIIGGAERQDSVRAGLEALAKLPAEKQPDIVLVHDGARPNISTDIILRVVEALKDYPAAIPAIPVAETLKRNKDQFIEETVSRDNLYRAQTPQGFQFQPFLTIHRQAAGSSATDDAALFENVGLKVAIVQGDENNIKLTYQEDLKRLECLMSNMMLPRVGAGFDVHAFEKGRPLHLCGIEVPHEFGLAGHSDADVGLHALCDAIYGALAEGDIGAHFPPSDNQWKNADSKQFLIHAGERVRIRGGKIINIDLTLICERPKMRPYIDQMREKVAELLQIEFSRVSVKATTTEKLGFTGREEGIACQAMTSILLPE

Annotated regions:
phrase: KRLECLMSNMMLPRVGAGFDVHAFEKGRPLHLCGIEVPHEFGLAGHSDADVGLHALCDAIYGALAEGDIGAHFPPSDNQWKNADSKQFLIHAGERVRIRGGKIINIDLTLICERPKMRPYIDQMREKVAELLQIEFSRVSVKATTTEKLGFTGREEGIACQAMT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: SDADVGLHALCDAIY
type: CONSERVED_SITE
name: MECDP_synthase_CS
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site

phrase: PRVGAGFDVHAFEKGRPLHLCGIEVPHEFGLAGHSDADVGLHALCDAIYGALAEGDIGAHFPPSDNQWKNADSKQFLIHAGERVRIRGGKIINIDLTLICERPKMRPYIDQMREKVAELLQIEFSRVSVKATTTEKLGFTGREEGIACQAMTSIL
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RVGAGFDVHAFEKGRPLHLCGIEVPHEFGLAGHSDADVGLHALCDAIYGALAEGDIGAHFPPSDNQWKNADSKQFLIHAGERVRIRGGKIINIDLTLICERPKMRPYIDQMREKVAELLQIEFSRVSVKATTTEKLGFTGREEGIACQ
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: VLVHDGA
type: CONSERVED_SITE
name: ISPD_synthase_CS
description: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site

phrase: RVGAGFDVHAFEKGRPLHLCGIEVPHEFGLAGHSDADVGLHALCDAIYGALAEGDIGAHFPPSDNQWKNADSKQFLIHAGERVRIRGGKIINIDLTLICERPKMRPYIDQMREKVAELLQIEFSRVSVKATTTEKLGFTGREEGIACQAMT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RVGAGFDVHAFEKGRPLHLCGIEVPHEFGLAGHSDADVGLHALCDAIYGALAEGDIGAHFPPSDNQWKNADSKQFLIHAGERVRIRGGKIINIDLTLICERPKMRPYIDQMREKVAELLQIEFSRVSVKATTTEKLGFTGREEGIACQAMT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Protein sequence:
MNPAHLLVLSAVCVSLLGASSIPPQPLHLVQFNGMIRCTIPGSIPWWDYSDYGCYCGSGGSGTPVDELDRCCQVHDNCYTQAQQLTECSPYSKRYSYDCSEGTLTCKADNDECAAFVCDCDRVAAICFAGAPYNKENINIDTTTRC

Annotated regions:
phrase: LVQFNGMIRCTIPGSIPWWDYSDYGCYCGSGGSGTPVDELDRCCQVHDNCYTQAQQLTECSPYSKRYSYDCSEGTLTCKADNDECAAFVCDCDRVAAICFAGAPYNK
type: DOMAIN
name: PLipase_A2_dom
description: Phospholipase A2 domain

phrase: VCDCDRVAAI
type: ACTIVE_SITE
name: PLipase_A2_Asp_AS
description: Phospholipase A2, aspartic acid active site

phrase: CCQVHDN
type: ACTIVE_SITE
name: PLipase_A2_His_AS
description: Phospholipase A2, histidine active site

phrase: HLVQFNGMIRCTIPGSIPWWDYSDYGCYCGSGGSGTPVDELDRCCQVHDNCYTQAQQLTECSPYSKRYSYDCSEGTLTCKADNDECAAFVCDCDRVAAICFAGAPYNKENINIDTTTR
type: DOMAIN
name: PLipase_A2_dom
description: Phospholipase A2 domain

phrase: LVQFNGMIRCTIPGSIPWWDYSDYGCYCGSGGSGTPVDELDRCCQVHDNCYTQAQQLTECSPYSKRYSYDCSEGTLTCKADNDECAAFVCDCDRVAAICFAGAPYNKENINIDTTTR
type: DOMAIN
name: PLipase_A2_dom
description: Phospholipase A2 domain
Protein sequence:
KESAAAKFERQHMDPSMSSASSSNYCNQMMQSRKMTQDRCKPVNTFVHESLADVQAVCFQKNVACKNGQSNCYQSNSAMHITDCRESGNSKYPNCVYKATQAEKHIIVACEGNPYVPVHFDASV

Annotated regions:
phrase: AAAKFERQHMDPSMSSASSSNYCNQMMQSRKMTQDRCKPVNTFVHESLADVQAVCFQKNVACKNGQSNCYQSNSAMHITDCRESGNSKYPNCVYKATQAEKHIIVACEGNPYVPVHF
type: DOMAIN
name: RNaseA_domain
description: Ribonuclease A-domain

phrase: CKPVNT
type: ACTIVE_SITE
name: RNaseA_AS
description: Ribonuclease A, active site

phrase: KESAAAKFERQHMDPSMSSASSSNYCNQMMQSRKMTQDRCKPVNTFVHESLADVQAVCFQKNVACKNGQSNCYQSNSAMHITDCRESGNSKYPNCVYKATQAEKHIIVACEGNPYVPVHFDAS
type: DOMAIN
name: RNaseA_domain
description: Ribonuclease A-domain
Protein sequence:
MERIKELRNLMSQSRTREILTKTTVDHMAIIKKYTSGRQEKNPSLRMKWMMAMKYPITADKRITEMIPERNEQGQTLWSKMNDAGSDRVMVSPLAVTWWNRNGPMTSTVHYPKIYKTYFEKVERLKHGTFGPVHFRNQVKIRRRVDINPGHADLSAKEAQDVIMEVVFPNEVGARILTSESQLTITKEKKEELQDCKISPLMVAYMLERELVRKTRFLPVAGGTSSVYIEVLHLTQGTCWEQMYTPGGEVRNDDVDQSLIIAARNIVRRAAVSADPLASLLEMCHSTQIGGTRMVDILRQNPTEEQAVDICKAAMGLKISSSFSFGGFTFKRTSGSSVKREEEMLTGNLQTLKIRVHEGYEEFTMVGKRATAILRKATRKLIQLIVSGRDEQSIAEAIIVAMVFSQEDCMIKAVRGDLNFVNRANQRLNPMHQLLRHFQKDAKVLFQNWGIEHIDNVMGMIGVLPDMTPSTEMSMRGVRVSKMGVDEYSSAERVVVSIDRFLRVRDQRGNVLLSPEEVSETQGTEKLTITYSSSMMWEINGPESVLVNTYQWIIRNWETVKIQWSQNPTMLYNKMEFEPFQSLVPKAIRGQYSGFVRTLFQQMRDVLGTFDTTQIIKLLPFAAAPPKQSRMQFSSLTVNVRGSGMRILVRGNSPVFNYNKTTKRLTILGKDAGTLTEDPDEGTSGVESAVLRGFLILGKEDRRYGPALSINELSNLAKGEKANVLIGQGDVVLVMKRKRDSSILTDSQTATKRIRMAIN

Annotated regions:
phrase: GRQEKNPSLRMKWMMAMKYPITADKRITEMIPERNEQGQTLWSKMNDAGSDRVMVSPLAVTWWNRNG
type: DOMAIN
name: Flu_PB2_2nd
description: Influenza RNA polymerase PB2, second domain

phrase: VRNDDVDQSLIIAARNIVRRAAVSADPLASLLEMCHSTQIGGTRMVDILRQNPTEEQAVDICKAAMGLK
type: DOMAIN
name: PB2_helical
description: Polymerase basic protein 2, helical domain

phrase: YSSSMMWEINGPESVLVNTYQWIIRNWETVKIQWSQNPTMLYNKMEFEPFQSLVPKAIRGQYSGFVRTLFQQMRDVLGTFDTTQIIKLLPFAAAPPKQSRMQFSSLTVNVRGSGMRILVRGNSPVFNYNKTTKRLTILGKDAGTLTEDP
type: DOMAIN
name: Flu_PB2_6th
description: Influenza RNA polymerase PB2, sixth domain

phrase: MERIKELRNLMSQSRTREILTKTTVDHMAIIKKYT
type: DOMAIN
name: Flu_PB2_N
description: Influenza RNA polymerase PB2, N-terminal region

phrase: STVHYPKIYKTYFEKVERLKHGTFGPVHFRNQVKIRRRVDINPGHADLSAKEAQDVIMEVVFPNEVGARILTSESQLTITKEKKEELQDCKISPLMVAYMLERELVRKTRFLPVAGGTSSVYIEVLHLTQGTCWEQMYTPG
type: DOMAIN
name: Flu_PB2_middle
description: Influenza RNA polymerase PB2, middle domain

phrase: TSGVESAVLRGFLILGKEDRRYGPALSINELSNLAKGEKANVLIGQGDVVLVMKRKRDSSILTDSQTATKRIRM
type: DOMAIN
name: Flu_PB2_C
description: Influenza RNA polymerase PB2, C-terminal domain

phrase: SSSFSFGGFTFKRTSGSSVKREEEMLTGNLQTLKIRVHEGYEEFTMVGKRATAILRKATRKLIQLIVSGRDEQSIAEAIIVAMVFSQEDCMIKAVRGDLNFVNRANQRLNPMHQLLRHFQKDAKVLFQNWGIEHIDNVMGMIGVLPDMTPSTEMSMRGVRVSKMGVDEYSSAERVVVSIDRFLRVRDQRGNVLLSPEEVSETQGTEKLTI
type: DOMAIN
name: Flu_PB2_CAP-bd
description: Influenza RNA polymerase PB2, CAP binding domain