nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MASLQCSFHFLGTNPKKYNPSSIFQSYSRTSFTKLSSRVSRQRFLRCTLSMNGCEADHKAPLGTVETRTLSTVPSPAAATERLITAVSDLKSQPPPFSSGIVRLQVPIEQKIGAIDWLHAQNEILPRSFFSRRSDSGRPDLLQDFSSDNGSSDHNPVSVAGIGSAVFFRDLDPFSHDDWRSIRRFLSSKSPLIRAYGGLRFDPTGKIAVEWEHFGSFYFTVPQVEFDEFGGSSMLAATVAWDNELSWTLENAIEALQETMLQVSSVIMRLRRESLGVIVVSKNHVPSEGAYYPAVNNALEIIKDKHSPLSKVVLARSSRIITDTDIDPIAWLARLQCEGQDAYQFCLQPPGAPAFIGNTPERLFHRKHLGVCSEALAATRPRGDSKVREMEIERDLLTSPKDDLEFSIVRENIREKLKTICDRVVVKPHKSVRKLARVQHLYSQLAGQLKREDDEFNILTALHPTPAVCGCPVEEARLLIKQIESFDRGMYAGPIGFFGGGESEFSVGIRSALVEKGLGALIYAGTGIVSGSNPSSEWNELELKISQFTKSLEHESALQPIN

Annotated regions:
phrase: AYYPAVNNALEIIKDKHSPLSKVVLARSSRIITDTDIDPIAWLARLQCEGQDAYQFCLQPPGAPAFIGNTPERLFHRKHLGVCSEALAATRPRGDSKVREMEIERDLLTSPKDDLEFSIVRENIREKLKTICDRVVVKPHKSVRKLARVQHLYSQLAGQLKREDDEFNILTALHPTPAVCGCPVEEARLLIKQIESFDRGMYAGPIGFFGGGESEFSVGIRSALVEKGLGALIYAGTGIVSGSNPSSEWNELEL
type: DOMAIN
name: Chorismate_C
description: Chorismate-utilising enzyme, C-terminal
Protein sequence:
MKKSRPVRPLKAWAIIVSVILLLCGAYAWRQHQADQRSRISYTAFIDRVNAGEIKSVRTEGDEIIALAASGVKYKLYRPADAELSQLLLAKHIEFSANAPAARSLWIELCFLLVLLVPLFFVFKRLAVFGRSSARLTDGSRSTTLFTDVAGADEAKIDLQETVEFLKDPQKFAKLGGKMPTGVLLVGPPGTGKTLLARAVAGEAGVPFYAMSGSEFVEMYVGVGASRVRDLFARAKKVAPCIIFIDELDAVGRRRDAGGNGASDERDQTLNQLLVEMDGFTVNSGIVIIAATNRPEVLDPALLRPGRFDRQVMVGNPDIRGREEILKVHTRSIPLAAEVDLLVIARGTPGFSGADLANVVNEAAILAARQDKSVLEMVDFDMARDKILMGAEKKSMVLSEKSKLSTAYHEAGHVMVAKLVPGCDPVHKVSIIPRGRALGVTVQIPEEDIHCYTRDMLIGHIKMLMGGRAAEELVFSTTTTGAGNDLARATDMARRMVCEWGMSEAFGPVAFGHRESTPQSDGSTPGNTFSDTTALEIDSQIRSIVTTAYNEVRDLLQTNRTALDLLSTELVAHETLGSREIDAILTTVSAQDRSAEGYAAAA

Annotated regions:
phrase: IVIIAATNRPEVLDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: MPTGVLLVGPPGTGKTLLARAVAGEAGVPFYAMSGSEFVEMYVGVGASRVRDLFARAKKVAPCIIFIDELDAVGRRRDAGGNGASDERDQTLNQLLVEMDGFTVNSGIVIIAATNRPEVLDPALLRPGRFDRQVMVGNP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: WAIIVSVILLLCGAYAWRQHQADQRSRISYTAFIDRVNAGEIKSVRTEGDEIIALAASGVKYKLYRPADAELSQLLLAKHIEFSAN
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular

phrase: VLLVGPPGTGKTLLARAVAGEAGVPFYAMSGSEFVEMYVGVGASRVRDLFARAKKVAPCIIFIDELDAVGRRRDAGGNGASDERDQTLNQLLVEMDGFTVNSGIVIIAATNRPEVLDPALLRPGRFDRQVMV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: VDLLVIARGTPGFSGADLANVVNEAAILAARQDKSVLEMVDF
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: MVLSEKSKLSTAYHEAGHVMVAKLVPGCDPVHKVSIIPRGRALGVTVQIPEEDIHCYTRDMLIGHIKMLMGGRAAEELVFSTTTTGAGNDLARATDMARRMVCEWGMSEAFGPVAFGHRESTPQSDGSTPGNTFSDTTALEIDSQIRSIVTTAYNEVRDLLQTNRTALDLLSTELVAHETLGSREIDA
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41
Protein sequence:
MIQKNTLLDVADNSGARKVLCIGLLNGKKSASVGDVIVVSTKVITPRGKVSKGKVYKAVVVRVKKAVRRLDGSIIRFSSNAVVLINDQGDPLGTRVFGPIKKLPFGLFSKVMSLAVEVL

Annotated regions:
phrase: AVVVRVKKAVRRLDGSIIRFSSNAVV
type: CONSERVED_SITE
name: Ribosomal_uL14_CS
description: Large ribosomal subunit protein uL14, conserved site
Protein sequence:
MPLIAISYSHGKLSILNQLFLPHQTTYDPIYSACDAWHAIHDMRVRGAPAIAIVAALSVAVELYDLIQKGKLSDQAKEVEIFIREKLEYIASSRPTAVNLVEAAGRLGKIVVARSCGEGVTGREVAEEYIRAAEKMLEDDVKDNRGIGEFGAKWIMKQAIDGAEGEGEGKGKVAVLTHCNTGSLATAGYGTALGVIRSLHAANSLKHAYCTETRPYNQGSRLTAYELVHDNIPATLITDSMAAALLAHKSAGVGAIVVGADRVAANGDTANKIGTYGLAVLAKHHGVKFLVAAPRTTIDMNTKSGEGIAIEERPRQEMTRIRGPRVGGEQDGLGAMETITVAADGIDVWNPAFDVTPASLIDGIITEIGVVEKDRDGEFHLERVFE

Annotated regions:
Protein sequence:
MTQPLHVIILAAGAGKRMKSALPKVLQPIAGRPMLAHVIDTARQLQPEAIHVVYGHGGEAVRQAFADQPDLHWAEQSRQLGTGHAVLQAMPEVPDAATVLVLYGDVPLIRGETLRHLLSQPGRLAVLVAEVADPTGYGRIVRNAEGKVGAIVEQKDASDEQRSIRTINTGIITAESTALRRWLSQLSNANAQGEYYLTDIFAAAASDYTPAEMAFVQDPQDAEGANDPWQLAQLERAWQLREVRALCAQGARVLDPARLDIRGPVTVGSDVQIDVNVILEGRVVLGDGVSIGAFTRLKDVTLAAGTVVKPHCDLDGVISEGAAEIGPFARLRPGTVLAEGSHVGNFVETKKVVLGAGSKANHLTYLGDAVIGSKVNIGAGTITCNYDGVNKSQTTIGDRAFIGSNSSLVAPVVIGEGATVAAGSVITRGAPADKLTVARARQETIDGWKRPTKK

Annotated regions:
phrase: VTVGSDVQIDVNVILEGRVVLGDGVSIGAFTRL
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: VIILAAGAGKRMKSALPKVLQPIAGRPMLAHVIDTARQLQPEAIHVVYGHGGEAVRQAFADQPDLHWAEQSRQLGTGHAVLQAMPEVPDAATVLVLYGDVPLIRGETLRHLLSQPGRLAV
type: DOMAIN
name: MobA-like_NTP_Trfase
description: MobA-like NTP transferase

phrase: TTIGDRAFIGSNSSLVAPVVIGEGATVAAGSVIT
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: GARVLDPARLDIRGPVTVGSDVQIDVNVILEGRVVLGDGVSIGAFTRLKDVTLAAGTVVKPHCDLDGVISEGAAEIGPFARLRPGTVLAEGSHVGNFVETKKVVLGAGSKANHLTYLGDAVIGSKVNIGAGTITCNYDGVNKSQTTIGDRAFIGSNSSLVAPVVIGEGATVAAGSVITRGAPADKLTVARAR
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain
Protein sequence:
MLRAQRPRLARLRACLSRGLHHKPVMALRREDVNAWERRAPLAPKHIKGITKLGYKVLIQPSNRRAIHDKEYVRAGGILQEDITEACLILGVKRPPEEKLMSKKTYAFFSHTIKAQEANMNLLDEVLKQEIRLIDYEKMVDHRGSRIVAFGQWAGVAGMINILHGMGLRLLALGHHTPFMHLGMAHNYRNSSQAVQAVRDAGYEISLGLMPKSIGPLTFVFTGTGNVSKGAQEVFNELPCEYVEPHELREVSKTGDLRKVYGTVLSRHHHLVRKTDGVYDPVEYEKYPERYTSRFNTDIAPYTTCLINGIYWEQNTPRLLTRQDAQSLLVPVKSSVVPVEGCPELPHKLVAICDISADTGGSIDFMTECTTIERPFCMYDADQQIIHDSVEGSGILMCSIDNLPAQLPIEATEYFGDMLYPYVEEMLLSDASQPLESQNFSPVVRDAVITSNGLLTDKYKYIQKLRESRERIQFLSMSTKKKVLVLGSGYVSGPVLEYLSRDNNIEITLGSDMTNQMQQLSKKYNINPVSLTVGKQEAKLQSLVESQDLVISLLPYVLHPVVAKACIESRVNMVTASYITPAMKELEKSVDDAGITVIGELGLDPGLDHMLAMETIDTAKELGATVESYVSYCGGLPAPEHSDNPLRYKFSWSPVGVLMNIMQPASYLLNGKVVNVTGGVSFLNSVTPMDYFPGLNLEGYPNRDSIKYAEIYGISSAHTLLRGTLRYKGYSKALNGFVKLGLINREAYPALRPEANPLTWKQLLCDLVGISRSSPCEKLKEVVFTKLGGDNTQLEAAEWLGLLGDEQVPQAESIVDAFSKHLVSKLSYGPEEKDMIVMRDSFGIRHPSGHLENKTIDLVVYGDFNGFSAMAKTVGLPTAMAAKMLLDGEIEAKGLMGPFTKEIYGPILERIKAEGIVFNTQSTIKL

Annotated regions:
phrase: LRREDVNAWERRAPLAPKHIKGITKLGYKVLIQPSNRRAIHDKEYVRAGGILQEDITEACLILGVKRPPEEKLMSKKTYAFFSHTIKAQEANMNLLDEVLKQEIRLIDYEKMVDHRGSRIVAFGQWAGV
type: DOMAIN
name: AlaDH/PNT_N
description: Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal

phrase: ALRREDVNAWERRAPLAPKHIKGITKLGYKVLIQPSNRRAIHDKEYVRAGGILQEDITEACLILGVKRPPEEKLMSKKTYAFFSHTIKAQEANMNLLDEVLKQEIRLIDYEKMVDHRGSRIVAFGQWAGV
type: DOMAIN
name: AlaDH/PNT_N
description: Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal

phrase: VLVLGSGYVSGPVLEYLSRDNNIEITLGSDMTNQMQQLSKKYNINPVSLTVGKQEAKLQSLVESQDLVISLLPYVLHPVVAKACIESRVNMVTASYITPAMKELEKSVDDAGITV
type: DOMAIN
name: Sacchrp_dh_NADP-bd
description: Saccharopine dehydrogenase, NADP binding domain

phrase: AVRDAGYEISLGLMPKSIGPLTFVFTGTGNVSKGAQEVFNELPCEYVEPHELREVSKTGDLRKVYGTVLSRHHHLVRKTDGVYDPVEYEKYPERYTSRFNTDIAPYTTCLINGIYWEQNTPRLLTRQDAQSLLVPVKSSVVPVEGCPELPHKLVAICDISADTGGSIDFMTECTTIERPFCMYDADQQIIHDSVEGSGILMC
type: DOMAIN
name: AlaDH/PNT_NAD(H)-bd
description: Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain

phrase: GLDPGLDHMLAMETIDTAKELGATVESYVSYCGGLPAPEHSDNPLRYKFSWSPVGVLMNIMQPASYLLNGKVVNVTGGVSFLNSVTPMDYFPGLNLEGYPNRDSIKYAEIYGISSAHTLLRGTLRYKGYSKALNGFVKLGLINREAYPALRPEANPLTWKQLLCDLVGISRSSPCEKLKEVVFTKLGGDNTQLEAAEWLGLLGDEQVPQAESIVDAFSKHLVSKLSYGPEEKDMIVMRDSFGIRHPSGHLENKTIDLVVYGDFNGFSAMAKTVGLPTAMAAKMLLDGEIEAKGLMGPFTKEIYGPILERIKAEG
type: DOMAIN
name: Sacchrp_dh-like_C
description: Saccharopine dehydrogenase-like, C-terminal
Protein sequence:
MIAIIVQTLLISVSVAMDAFAVSIGKGLTVSRVRPGDAVRSALWFGGSQALFLILGHYAASAFSAYVTAFDHWIIFGLLAFIGGNMVHEAYEEDAENAKETAQFDWKHMLPLAVACSIDAFAVGVSLAFMATSVPFAILCISVVTGLFSAAGLYIGRAFGAHWQKPAQIAGGVVLILIGVKVLLEHLGVIAF

Annotated regions:
Protein sequence:
MGRLSSTLCLTFLILATVAFGVPPKKSINVPFGRNYFPTWAFDHIKYLNGGSEVHLVLDKYTGTGFQSKGSYLFGHFSMHIKMVAGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGAGNREQRINLWFDPSKDYHSYSVLWNMYQIVFFVDDVPIRVFKNSKDVGVKFPFNQPMKIYSSLWNADDWATRGGLEKTNWEKAPFVASYRGFHVDGCEASVNAKFCETQGKRWWDQKEFQDLDANQYKRLKWVRKRYTIYNYCTDRVRFPVPPPECRRDRDI

Annotated regions:
phrase: QGKRWWDQKEFQDLDANQYKRLKWVRKRYTIYNYCTDRVRFPVPPPE
type: DOMAIN
name: XET_C
description: Xyloglucan endo-transglycosylase, C-terminal

phrase: EIDFEFLGNR
type: ACTIVE_SITE
name: GH16_AS
description: Glycoside hydrolase, family 16, active site

phrase: GRNYFPTWAFDHIKYLNGGSEVHLVLDKYTGTGFQSKGSYLFGHFSMHIKMVAGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGAGNREQRINLWFDPSKDYHSYSVLWNMYQIVFFVDDVPIRVFKNSKDVGVKFPFNQPMKIYSSLWNADDWATRGGLEKTNW
type: DOMAIN
name: GH16
description: Glycoside hydrolase family 16

phrase: PPKKSINVPFGRNYFPTWAFDHIKYLNGGSEVHLVLDKYTGTGFQSKGSYLFGHFSMHIKMVAGDSAGTVTAFYLSSQNSEHDEIDFEFLGNRTGQPYILQTNVFTGGAGNREQRINLWFDPSKDYHSYSVLWNMYQIVFFVDDVPIRVFKNSKDVGVKFPFNQPMKIYSSLWNADDWATRGGLEKTNWEKAPFVAS
type: DOMAIN
name: GH16
description: Glycoside hydrolase family 16
Protein sequence:
MEELVGLREGFSGDPVTLQELWGPCPHIRRAIQGGLEWLKQKVFRLGEDWYFLMTLGVLMALVSYAMNFAIGCVVRAHQWLYREIGDSHLLRYLSWTVYPVALVSFSSGFSQSITPSSGGSGIPELKTMLAGVILEDYLDIKNFGAKVVGLSCTLATGSTLFLGKVGPFVHLSVMIAAYLGRVRTTTIGEPENKSKQNEMLVAAAAVGVATVFAAPFSGVLFSIEVMSSHFSVRDYWRGFFAATCGAFIFRLLAVFNSEQETITSLYKTSFRVDVPFDLPEIFFFVALGGICGVLSCAYLFCQRTFLSFIKTNRYSSKLLATSKPVYSALATLLLASITYPPGVGHFLASRLSMKQHLDSLFDNHSWALMTQNSSPPWPEELDPQHLWWEWYHPRFTIFGTLAFFLVMKFWMLILATTIPMPAGYFMPIFILGAAIGRLLGEALAVAFPEGIVTGGVTNPIMPGGYALAGAAAFSGAVTHTISTALLAFELTGQIVHALPVLMAVLAANAIAQSCQPSFYDGTIIVKKLPYLPRILGRNIGSHHVRVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAPGHQQCLQDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTSRGRAVGCVSWVEMKKAISNLTNPPAPK

Annotated regions:
phrase: VEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQA
type: DOMAIN
name: CBS_dom
description: CBS domain

phrase: MNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPP
type: DOMAIN
name: CBS_dom
description: CBS domain

phrase: SITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQAL
type: DOMAIN
name: CBS_dom
description: CBS domain
Protein sequence:
MIKQFFSNVYEGIKHYSNYLWELSKKQLIKIYLNKKHLIWKISIILICAFIVLLTSFLTRNSILNATQSYWELIPGFLVINITGNTGVSFGTLGDSNPSLVYFVQSIPIVLGFFVLLFSSNYLLDIGVSLVFFGGLSNIIDRSIVDNYKYLSGISTNNAVVDYFQFPFIKNSAIFNFPDTFVIIGMIFVGIQIIISFVKDYKKEKDSEENKKPIKDVVLDEERNKTKKEPIKKPIVIQKS

Annotated regions:
Protein sequence:
MVNIPPAEELAGRVAVVIDVLRATTTICTALANGADTVVPILSPEEAFQVARDNPDRQFLLGGERKAVLIPGFHCDNSPLEYTEARVKGRPILFTTTNGTRAIRRAAGADRVYIASLLNAPAVGRELARLEVDVAICCAGTHDQFSLEDTVCAGAILEYMAGPDRPVETNDMGLVARELFRRYDGRLADLLHLSSHGQNLVRLGMQDDLLFCAQLGTLTILPVFTEGQVVLLE

Annotated regions:
Protein sequence:
MPAMSQNPPLLRPDLAPAPIFDTSRREGQPTIGMVSLGCPKALVDSERILTRLRAEGYAISPDYKGAGAVIVNTCGFLDSAKAESLQAIGEALAENGKVIVTGCLGAEPEYITGAHPSVLAVTGPQQYEQVLDAVHHAVPPSPDPFVDLLPASGVKLTPRHYSYLKISEGCNHACKFCIIPDMRGKLVSRPAHAVIREAEKLVEAGVRELLVISQDTSAYGLDRKFATERGHRAHITDLARDLGQLGAWVRLHYVYPYPHVRDLIPLMAAHGESGGLVLPYLDIPFQHAHPDVLKRMARPAAAARTLDEIAAWRAVCPDITLRSTFIVGYPGETEAEFQTLLDWLDEAQLDRVGCFQYENVKGARANDLPDHVPDDVKQDRWDRFMQKAQAISEAKLAAKVGHRIEVIVDAVDGDGATCRTKADAPEIDGNLFIDEGFEDLAPGDIVSVTVDEAGEYDLWGRL

Annotated regions:
phrase: QPTIGMVSLGCPKALVDSERILTRLRAEGYAISPDYKGAGAVIVNTCGFLDSAKAESLQAIGEALAENGKVIVTGCLGAEPEYITGAHPSVLAVTGPQQYEQVLDAVHHAVPPSPDPFVDLLPASGVKLTPRHYSYLKISEGCNHACKFCIIPDMRGKLVSRPAHAVIREAEKLVEAGVRELLVISQDTSAYGLDRKFATERGHRAHITDLARDLGQLGAWVRLHYVYPYPHVRDLIPLMAAHGESGGLVLPYLDIPFQHAHPDVLKRMARPAAAARTLDEIAAWRAVCPDITLRSTFIVGYPGETEAEFQTLLDWLDEAQLDRVGCFQYENVKGARANDLPDHVPDDVKQDRWDRFMQKAQAISEAKLAAKVGHRIEVIVDAVDGDGATCRTKADAPEIDGNLFIDEGFEDLAPGDIVSVTVDEAGEYDLWG
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: HYSYLKISEGCNHACKFCIIPDMRGKLVSRPAHAVIREAEKLVEAGVRELLVISQDTSAYGLDRKFATERGHRAHITDLARDLGQLGAWVRLHYVYPYPHVRDLIPLMAAHGESGGLVLPYLDIPFQHAHPDVLKRMARPAAAARTLDEIAAWRAVCPDITLRSTFIVGYPGETEAEFQTLLDWLDEAQLDRVGCFQYENVKGARANDLPDHVPDDVKQDRWDRFM
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: LTPRHYSYLKISEGCNHACKFCIIPDMRGKLVSRPAHAVIREAEKLVEAGVRELLVISQDTSAYGLDRKFATERGHRAHITDLARDLGQLGAWVRLHYVYPYPHVRDLIPLMAAHGESGGLVLPYLDIPFQHAHPDVLKRMARPAAAARTLDEIAAWRAVCPDITLRSTFIVGYPGETEAEFQTLLDWLDEAQLDRVGCFQYENVKGARANDLPDHVPDDVKQDRWDRFMQKAQAISE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: KISEGCNHACKFCIIPDMRGKLVSRPAHAVIREAEKLVEAGVRELLVISQDTSAYGLDRKFATERGHRAHITDLARDLGQLGAWVRLHYVYPYPHVRDLIPLMAAHGESGGLVLPYLDIPFQHAHPDVLKRMARPAAAARTLDEIAAWRAVCPDITLRSTFIVGYPGETEAEFQTLLDW
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: PTIGMVSLGCPKALVDSERILTRLRAEGYAISPDYKGAGAVIVNTCGFLDSAKAESLQAIGEALAENGKVIVTGCLGAEPEYITGAHPSVLAVTGPQQYEQVLDAVHHAV
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: GMVSLGCPKALVDSERILTRLRAEGYAISPDYKGAGAVIVNTCGFLDSAKAESLQAIGEALAENGKVIVTGCLGA
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: VGHRIEVIVDAVDGDGATCRTKADAPEIDGNLFIDEGFEDLAPGDIVSVTVDEAGEYDLWG
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: AAKVGHRIEVIVDAVDGDGATCRTKADAPEIDGNLFIDEGFEDLAPGDIVSVTVDEAGEYDLWGR
type: DOMAIN
name: TRAM_dom
description: TRAM domain
Protein sequence:
MLEELKYLSETPGIGGRIKVKPEDFIVREIIPKSIFKGNCQIYLMKKRNWETIAAIKEIAKRIGIHYSEIGFAGTKDRHAVTYQYISVCRDVRKEVEKLKIRDVELKFVGYGRPLKLGFLLGNFFLIRVRDVKRPELIPKIIEELKIKGGFPNYFGIQRFGEKRSVNHIVGKLLLEGKYEEAAEVFLGYPGNGMEGDEARKRFLETKDVDLALEEFPKFLRYERAMLYRYRETRSWKKAFLVLPRPILRIFIHAFQAYLFNLYLSRRIEEGLPLNEAIPGDIVVQVKRGIPLRTRTYRVTETNVDFVNEKIKRGEAMVSGPIFGYSYRKAHGIPGRLEEEILDENEVNVEMFKKLPKPMREPGGRRELLIKPRKFAYKRKEEEVLFKFFLPKGVYATSVLREITKH

Annotated regions:
phrase: GFPNYFGIQRFGEKRSVNHIVGKLLLEGKYEEAAEVFLGYPGNGMEGDEARKRFLETKDVDLALEEFPKFLRYERAMLYRYRETRSWKKAFLVLPRPILRIFIHAFQAYLFNLYLSRRIEEGLPLNEAIPGDIVVQVKRGIPLRTRTYRVTETNVDFVNEKIKRGEAMVSGPIFGYSYRKAHGIPGRLEEEILDENEVNVEMFKKLPKPMREPGGRRELLI
type: DOMAIN
name: PsdUridine_synth_TruD_insert
description: Pseudouridine synthase, TruD, insertion domain

phrase: GTKDRHAVTYQYI
type: CONSERVED_SITE
name: PsdUridine_synth_TruD_CS
description: Pseudouridine synthase TruD, conserved site
Protein sequence:
MSTESKCPFNHAAGGGTTNRDWWPKQLNLKILHQHSTLSDPMGENFDYAKEFKSLDIEAVKQDLRNVMTQSQDWWPADFGHYGPLFIRMAWHSAGTYRTGDGRGGAGAGQQRFAPLNSWPDNVSLDKARRLIWPVKQKYGRKISWADLIVLTGNVALESMGFKTFGFSGGRADVWEPEEDVYWGSETTWLGGEERYGAQKKMQQPGDGTLVAEPENHANEESRTASGERNLENPLAAVQMGLIYVNPEGPEGVPDPVASARDIRETFGRMAMNDEETVALIAGGHAFGKTHGAGPADNVGPEPEAAGLEEQGLGWRNKFGSGKGGDTITSGLEVTWTSTPTKWSNEYLENLFGFEWELTKSPAGAHQWTPKNGAGAGKIPDAHDPSKRHAPSMLTSDLALRFDPAYEQISRRFLNNPEQLADAFARAWFKLTHRDMGPLARYLGPETPAEELLWQDPIPSVDHALVDDQDVATLKAKILASGLSVSQLVSTAWAAASTFRGSDKRGGANGGRLRLAPQKDWAVNQPEQLAGVLKTLEGIQSEFNAAQSGGKKVSIADLIVLAGNAGVEQAAKNAGQHVTVPFAPGRADASQEQTDVESFSFLEPIADGFRNYQKGHYKVSAESLLVDKAQLLTLTAPEMTVLLGGLRVLNINVGQSKHGVFTDQPGTLTNDFFKNLLDMGVEWKATAGGTDTFEARDRKTGAVKWTGTRVDLVFGSHAQLRAISEVYGSSDAHEKFVKDFVAVWTKVMNLDRFDLA

Annotated regions:
phrase: LDKARRLIWPVKQKYGRKISWADLIVLTGNVALESMGFKTFGFSGGRADVWEPEEDVYWGSETTWLGGEERYGAQKKMQQPGDGTLVAEPENHANEESRTASGERNLENPLAAVQMGLIYVNPEGPEGVPDPVASARDIRETFGRMAMNDEETVALIAGGHAFGKTHGAGPADNVGPEPEAAGLEEQGLGWRNKFGSGKGGDTITSGLEVTWTSTPTKWSNEYLENLFGFEWELTKSPAGAHQWTPKNGAGAGKIPDAHDPSKRHAPSMLTSDLALRFDPAYEQISRRFLNNPEQLADAFARAWFKLTHRDMGPLARYLGPETPA
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: TVALIAGGHA
type: BINDING_SITE
name: Peroxidases_heam-ligand_BS
description: Peroxidases heam-ligand binding site

phrase: AFARAWFKLTHRDMGPLARYLGPETPAEELLWQDPIPSVDHALVDDQDVATLKAKILASGLSVSQLVSTAWAAASTFRGSDKRGGANGGRLRLAPQKDWAVNQPEQLAGVLKTLEGIQSEFNAAQSGGKKVSIADLIVLAGNAGVEQAAKNAGQHVTVPFAPGRADASQEQTDVESFSFLEPIADGFRNYQKGHYKVSAESLLVDKAQLLTLTAPEMTVLLGGLRVLNINVGQSKHGVFTDQPGTLTNDFFKNLLDMGVEWKATAGGTDTFEARDRKTGAVKWTGTRVDLVFGSHAQLRAISEVYG
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: ADFGHYGPLFIRMAWHSAGTYRTGDGRGGAGAGQQRFAPLNSWPDNVSLDKARRLIWPVKQKYGRKISWADLIVLTGNVALESMGFKTFGFSGGRADVWEPEEDVYWGSETTWLGGEERYGAQKKMQQPGDGTLVAEPENHANEESRTASGERNLENPLAAVQMGLIYVNPEGPEGVPDPVASARDIRETFGRMAMNDEETVALIAGGHAFGKTHGAGPADNVGPEPEAAGLEEQGLGWRNKFGSGKGGDTITSGLEVTWTSTPTKWSNEYLENLFGFEWELTKSPAGAHQWTPKNGAGAGKIPDAHDPSKRHAPSMLTSDLALRFDPAYEQISRRFLN
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: GPLFIRMAWHSAGT
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: ISWADLIVLTGNVALES
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: GFKTFGFSGGRA
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: WTSTPTKWSNEYLEN
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: GPLFIRMAWHS
type: ACTIVE_SITE
name: Peroxidases_AS
description: Peroxidase, active site
Protein sequence:
MTDIAESTAHPRDGVPPSQQTTASVASAALATATASASPTTGSATSTAAPGKRSRSSSTGSAKGSIGGKKATRACDQCRKRKIKCDYDNDKNVCSSCNRNGDRCQFNRVQLKRGPSKGFNRNNSTSSAAGASTTSSTHQTFNANASGNTNSSNNNNHNNNNNNSVLLPPITQYFQGNEQNHDQQFWKVPVDLAGHLSPHHSQSHLHRDSVDSATSNNSNLNINGINIVDNSTTNSQSGGYFPVSACRSRASSVPSFPRKPPMQIQPPMTSMYASSLGGGTPATGAIGASNTAVSGATVPGTSSKRRKSVVSSNESPRTSRASLLPRPDFAVVNLVPVPQNVVTPASSLPAVPSGPLPSTGVGVGGSTGQVRLTDLDLINTYYEFVHLNFPVIPINKKALTSDILVINTSIEELNDLVIVWFRNSLELLVTVSLEQPQTQSTHAYTESLNSCFQNVVNLYPRLKQNNGIDPKVKIVYLCTFLILIYVLFFLGQHNSFIISVSVTIFNNFGLYGKLLSLNTSSPDSSSPYDIIFVRLYLLLVTFDSSYSMALGTPKLLNLEINGLVDKFFNLKSQNEHLFIDENLIKVNCILKNLELGEYICNASHMKDSSDAMKVIKSTYMSKKHQSKKADHSSSVSPMFISEWFQKFLVDKKNLISLLLDYQLRINDITPLQLSKLYVDLTNSLCALITVILEILKLMMKLNPTNSIDYNYRPLQHFDIDKPPSGGGGSSSTNTSSNPYSNPNSNEFYQKLLGLSSDRNTNLADMTRGCITPFAIITINELFNVTELIKNIPSSLISVVMESTKEEKENTINPQDLVLKLSNSMNEIVQITSLLTMVKPYKGIDSSYPRWQKFSKRSGPIPSMAPSNTATSTIQDFSEYNMTRSPSLGSSAYSNNPHSQHSDHNFNETNDYNDNISIFKKIYYENNNIQNNTTPQNEVLQSYIDTAWRLLDDSELGWL

Annotated regions:
phrase: KATRACDQCRKRKIKCDYDNDKNVCSSCNRNGDRCQF
type: DOMAIN
name: Zn2Cys6_DnaBD
description: Zn(2)Cys(6) fungal-type DNA-binding domain

phrase: ACDQCRKRKIKCDYDNDKNVCSSCNRNGDR
type: DOMAIN
name: Zn2Cys6_DnaBD
description: Zn(2)Cys(6) fungal-type DNA-binding domain

phrase: ACDQCRKRKIKCDYDNDKNVCSSCNRNGDRCQ
type: DOMAIN
name: Zn2Cys6_DnaBD
description: Zn(2)Cys(6) fungal-type DNA-binding domain

phrase: RACDQCRKRKIKCDYDNDKNVCSSCNRNGDRCQFNRVQLK
type: DOMAIN
name: Zn2Cys6_DnaBD
description: Zn(2)Cys(6) fungal-type DNA-binding domain

phrase: KKATRACDQCRKRKIKCDYDNDKNVCSSCNRNGDRCQFNRVQLKRG
type: DOMAIN
name: Zn2Cys6_DnaBD
description: Zn(2)Cys(6) fungal-type DNA-binding domain
Protein sequence:
MAENLDISELSPIHPAIISRQATINIGTIGHVAHGKSTVVKAISGVHTVRFKNELERNITIKLGYANAKIYKCSNEECPRPGCYRSYSSNKEDHPPCEICNSPMNLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQPQTSEHLAAIEIMQLKHIIILQNKVDLIRESAAEEHYQSILKFIKGTVAENSPIVPISAQLKYNIDAILEYIVKKIPIPVRDFTTAPRLIVIRSFDVNKPGAEVDDLKGGVAGGSILTGVLRLNDEIEIRPGIVTKDDDGRIRCQPIFSRIISLFAEHNDLKIAVPGGLIGVGTTVDPTLCRADRLVGQVLGSKGNLPEVYTELEINYFLLRRLLGVKSGDKNTTKVQKLAKNEVLMVNIGSTSTGGRVMMVKADMAKILLTAPACTEIGEKVALSRRIEKHWRLIGWAKVVEGKTLKV

Annotated regions:
phrase: INIGTIGHVAHGKSTVVKAISGVHTVRFKNELERNITIKLGYANAKIYKCSNEECPRPGCYRSYSSNKEDHPPCEICNSPMNLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQPQTSEHLAAIEIMQLKHIIILQNKVDLIRESAAEEHYQSILKFIKGTVAENSPIVPISAQLKYNIDAILEYIVKKIPIPV
type: DOMAIN
name: eIF2g_GTP-bd
description: Initiation factor eIF2 gamma, GTP-binding domain

phrase: TINIGTIGHVAHGKSTVVKAISGVHTVRFKNELERNITIKLGYANAKIYKCSNEECPRPGCYRSYSSNKEDHPPCEICNSPMNLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQPQTSEHLAAIEIMQLKHIIILQNKVDLIRESAAEEHYQSILKFIKGTVAENSPIVPISAQLKYNIDAILEYIVKKI
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: QATINIGTIGHVAHGKSTVVKAISGVHTVRFKNELERNITIKLGYANAKIYKCSNEECPRPGCYRSYSSNKEDHPPCEICNSPMNLVRHVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNESCPQPQTSEHLAAIEIMQLKHIIILQNKVDLIRESAAEEHYQSILKFIKGTVAENSPIVPISAQLKYNIDAILEYIVKKIPIP
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: GGVAGGSILTGVLRLNDEIEIRPGIVTKDDDGRIRCQPIFSRIISLFAEHNDLKIAVPGGLIGVGTTVDPTLCRADRLVGQV
type: DOMAIN
name: EFTu-like_2
description: Translation elongation factor EFTu-like, domain 2

phrase: TELEINYFLLRRLLGVKSGDKNTTKVQKLAKNEVLMVNIGSTSTGGRVMMVKADMAKILLTAPACTEIGEKVALSRRIEKHWRLIGWAK
type: DOMAIN
name: eIF2g_C
description: Initiation factor eIF2 gamma, C-terminal

phrase: DFTTAPRLIVIRSFDVNKPGAEVDDLKGGVAGGSILTGVLRLNDEIEIRPGIVTKDDDGRIRCQPIFSRIISLFAEHNDLKIAVPGGLIGVGTTVDPTLCRADRLVGQVLGSK
type: DOMAIN
name: eIF2g_dom_2
description: Initiation factor eIF2 gamma, domain 2

phrase: PEVYTELEINYFLLRRLLGVKSGDKNTTKVQKLAKNEVLMVNIGSTSTGGRVMMVKADMAKILLTAPACTEIGEKVALSRRIEKHWRLIGWAK
type: DOMAIN
name: eIF2g_C
description: Initiation factor eIF2 gamma, C-terminal

phrase: NIGTIGHVAHGKS
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: SFVDCPGHDI
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: NGAAVMDAALL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: IIILQNKVD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain
Protein sequence:
MNTMNNMHLYADSLGIHPADHYPTMNEIETTDNTYPRYTSPPHPSILHHPQAPEPAPPRAQTAHPPAWALTSQSGYQMNEPSLSLTPEHRPAAGPPNGPNLNHDSDPRRPARRQQPCGVGTTRPLPGCPGQGQEPSRRRTTFTDSISNPDSTIRCWDHGCEGRKFSSVGNYRRHLREKNGQAKMHPCPDCGRVFTRSTARNFHRQSGTCGLIPSQLMLQMGMGMQLQVQMQPVSQHSLASGHPPAFNLAPPVLLEPLADWSEPSQMDLYAASGVVFD

Annotated regions:
Protein sequence:
EFPKYDSITELDVYCNQNNKSDVQMYNFITKLESEYGNITVTVYKGSKTISNDKSILNECELYFVFNIGSNKRVVCLADNKTWDQSLKYWNSSKYPYPRWCDEYLTESEFVRSIGEYKFHVNNGTVKYWEKYYNFPDMVFNYSDKKHDLRIGSLDLETYGDNCFELGLGNLNVYAGGFALNDGFKKLYYLNNDTELNSGEAIIKKMFGDLFDYIAEDRKARNNYTIYAHNLGRFDSVFIIRSLCSEGYKINGQWIDNSILYLKIVDSTRKLTIKLRDSIKLVPHSLDKALSSNGCNISKGMFPHKFVNKDTLNYIGDKPDIKYYVDENKFNESKLKKYKSLPSILNLKKECLNYLDKDILGLLELMNKVSLTYFNEYKLNITKFSTLPSITLNIFGIRFYDDQNSIKMINGPLSEFIRSSYFGGNSDIFVSGEERLVKNGYHYDMNSQYPYAMLQSMPTGNPVFSTNTDLNYYRNGFVFARVTPPSKDTLVNLFIPRRSDDGSVICDRNTFYEFIPTPDLKQGLEYGYKFEVICGINFPDACGNGELFSEFVNHFYEIKSSSTDLGQKYIAKLSLNSLYGKFGQKEREYSIRLLEKDKAKEIISKNHYSYMSEVSDNYTLIKSGGRLNSKLRRLYAEQARINTINDDLLSSKFIKSRGIPSAVQISAMISSYARTSINPFKNIPGNLAIASNTDSLILRKPLEDHLIGKEIGKWKLEHKFKNGVFVKPKLYCYEDVDINELIRKASGVTASNLTYENFVELVNGKDVL

Annotated regions:
phrase: NNYTIYAHNLGRFDSVFIIRSLCSEGYKINGQWIDNSILYLKIVDSTRKLTIKLRDSIKLVPHSLDKALSSNGCNISKGMFPHKFVNKDTLNYIGDKPDIKYYVDENKFNESKLKKYKSLPSILNLKKECLNYLDKDILGLLELMNKVSLTYFNEYKLNITKFSTLPSITLNIFGIRFYDDQNSIKMINGPLSEFIRSSYFGGNSDIFVSGEERLVKNGYHYDMNSQYPYAMLQSMPTGNPVFSTNTDLNYYRNGFVFARVTPPSKDTLVNLFIPRRSDDGSVICDRNTFYEFIPTPDLKQGLEYGYKFEVICGINFPDACGNGELFSEFVNHFYEIKSSSTDLGQKYIAKLSLNSLYGKFGQKEREYSIRLLEKDKAKEIISKNHYSYMSEVSDNYTLIK
type: DOMAIN
name: DNA-dir_DNA_pol_B_mt/vir
description: DNA-directed DNA polymerase, family B, mitochondria/virus
Protein sequence:
MAQVQYAGTGRRKNSVARVRLVPGTGKITMNGKDVRDYLPYENLITDLSQPFGITETTGSYDVLVNVNGGGFSGQAGATRHGIARALLTVDPDFRGPLKKAGMLTRDPRMKERKKYGLKKARKASQFSKR

Annotated regions:
phrase: GGGFSGQAGATRHGIARA
type: CONSERVED_SITE
name: Ribosomal_uS9_CS
description: Small ribosomal subunit protein uS9, conserved site
Protein sequence:
MAFQECVIEVAQDQAEAWSDALFDLCALSVSVEDADADTPDEQPLFGEPGLEPTKLAWNRSRVVALFGDDTDPALAVAAASNALGIDPVPAYALREVEDQDWVRLTQSQFEPIRIGERIWVVPSWHDAPEPDAVVLELDPGLAFGTGSHPTTRLCMQWLEQNLKAGETVLDYGCGSGILAIVAKKLGAGDTLGIDIDPNAVEASRYNAERNQVQADFALPESVSEATYDLVVANILSNPLKLMAAMLSARVRAGGRLILSGVLERQAEEVAAAYAPWLPLTVWRSEEGWVCLHGTRP

Annotated regions:
Protein sequence:
MSTDRACMLCGLVQSTAEFNRNGCPNCQSIFEEAGVSAVECTSPSFEGLVGMCKPSRSWVARWMSIDSYIPGMYAVKIDGRLPIEVTELLPHYKPRDGSQVD

Annotated regions:
phrase: DRACMLCGLVQSTAEFNRNGCPNCQSIFEEAGVSAVECTSPSFEGLVGMCKPSRSWVARWMSIDSYIPGMYAVKI
type: DOMAIN
name: Spt4/RpoE2_Znf
description: Spt4/RpoE2 zinc finger

phrase: RACMLCGLVQSTAEFNRNGCPNCQSIFEEAGVSAVECTSPSFEGLVGMCKPSRSWVARWMSIDSYIPGMYAVK
type: DOMAIN
name: Spt4/RpoE2_Znf
description: Spt4/RpoE2 zinc finger

phrase: RACMLCGLVQSTAEFNRNGCPNCQSIFEEAGVSAVECTSPSFEGLVGMCKPSRSWVARWMSIDSYIPGMYAVKIDGRLPIEVTELLPHYKPR
type: DOMAIN
name: Spt4/RpoE2_Znf
description: Spt4/RpoE2 zinc finger
Protein sequence:
MVKLYSKFPDVQVLTTKGPIDFYKDIFGKGKWLFLFAHPADFTPVCTTEFVAFSQKYEEFKKLGVELVGLSVDSIYSHIQWLMDIEQRYGVKVPFPVIADPDKKLARMLDALDEASGQTIRIVVLASPDGIIRFVAQYPMEFGRNIDELLRITKAAIVNYKAKVVLPANWQPGQDVIVPPPAIFDEAEMRIKLPNAKAWYLLFKKYEELPPDQKV

Annotated regions:
phrase: KFPDVQVLTTKGPIDFYKDIFGKGKWLFLFAHPADFTPVCTTEFVAFSQKYEEFKKLGVELVGLSVDSIYSHIQWLMDIEQRYGVKVPFPVIADPDKKLARMLDALDEASGQTIRIVVLASPDGIIR
type: DOMAIN
name: AhpC/TSA
description: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant

phrase: KAKVVLPANWQPGQDVIVPPPAIFDEA
type: DOMAIN
name: Peroxiredoxin_C
description: Peroxiredoxin, C-terminal

phrase: VKLYSKFPDVQVLTTKGPIDFYKDIFGKGKWLFLFAHPADFTPVCTTEFVAFSQKYEEFKKLGVELVGLSVDSIYSHIQWLMDIEQRYGVKVPFPVIADPDKKLARMLDALDEASGQTIRIVVLASPDGIIRFVAQYPMEFGRNIDELLRITKAAI
type: DOMAIN
name: Thioredoxin_domain
description: Thioredoxin domain
Protein sequence:
MNTFVYLLFMMAVGALIGGMTNFIAIVMLFRPYEPIYIFGKRLPLTPGLIPKRRRELAEQLGKTVVEHLVTPEGLRRKLTDPVFVAEVADWGREWLKRWLSRRETPAQLLERLGVHAPDEWLSELAAKQAGRAYEQWSETWRLRPIRDLLSPELKETMESRIESLADYLADRVIDYFSSEEGKRQIAGMIDRFFQERGMVGGMMQMLLGNVNFVDKVQSELGKFLRHAGTRAMLARLLWTEWNKWISYPLAAVEEMIGRQRIKETVSAAARGLVRNNDWLDRPLAELIAPYERELFDRFVPQAANAAIHALSDKIEGIVGKLGLADIVRNQVESFSLRRLEVIILSIARRELKMITYLGALLGAMIGAVQGIIGLWL

Annotated regions: