Protein sequence:
MNTTDCFIALVHAIREIRAFFLPRATGRMEFTLHNGERKVFYSRPNNHDNCWLNTILQLFRYVGEPFFDWVYDSPENLTLEAIEQLEELTGLELHEGGPPALVIWNIKHLLHTGIGTASRPSEVCMVDGTNMCLADFHAGIFLKGQEHAVFACVTSNGWYAIDDEDFYPWTPDPSDVLVFVPYDQEPLNGEWKTKVQQKLKGAGQSSPATGSQNQSGNTGSIINNYYMQQYQNSMDTQLGDNAISGGSNEGSTDTTSTHTTNTQNNDWFSKLASSAFTGLFGALLADKKTEETTLLEDRILTTRNGHTTSTTQSSVGVTHGYSTEEDHVAGPNTSGLETRVVQAERFYKKYLFDWTTDKAFGHLEKLELPSDHHGVFGHLVDSYAYMRNGWDVEVSAVGNQFNGGCLLVAMVPEWKEFDTREKYQLTLFPHQFISPRTNMTAHITVPYLGVNRYDQYKKHKPWTLVVMVVSPLTVNNTSAAQIKVYANIAPTYVHVAGELPSKEGIFPVACADGYGGLVTTDPKTADPAYGKVYNPPRTNYPGRFTNLLDVAEACPTFLCFDDGKPYVTTRTDDTRLLAKFDLSLAAKHMSNTYLSGIAQYYTQYSGTINLHFMFTGSTDSKARYMVAYIPPGVETPPDTPERAAHCIHAEWDTGLNSKFTFSIPYVSAADYAYTASDTAETINVQGWVCIYQITHGKAENDTLVVSVSAGKDFELRLPIDPRQQTTATGESADPVTTTVENYGGETQIQRRHHTDIGFIMDRFVKIQSLSPTHVIDLMQTHQHGLVGALLRAATYYFSDLEIVVRHEGNLTWVPNGAPESALLNTSNPTAYNKAPFTRLALPYTAPHRVLATVYNGTSKYAVGGSGRRGDMGSLAARVVKQLPASFNYGAIKADAIHELLVRMKRAELYCPRPLLAIEVSSQDRHKQKIIAPAKQLLNFDLLKLAGDVESNPGPFFFSDVRSNFSKLVDTINQMQEDMSTKHGPDFNRLVSAFEELATGVKAIRTGLDEAKPWYKLIKLLSRLSCMAAVAARSKDPVLVAIMLADTGLEILDSTFVVKKISDSLSSLFHVPAPVFSFGAPILLAGLVKVASSFFRSTPEDLERAEKQLKARDINDIFAILKNGEWLVKLILAIRDWIKAWIASEEKFVTTTDLVPGILEKQRDLNDPSKYKEAKEWLDNARQACLKSGNVHIANLCKVVAPAPSRSRPEPVVVCLRGKSGQGKSFLANVLAQAISTHFTGRTDSVWYCPPDPDHFDGYNQQTVVVMDDLGQNPDGKDFKYFAQMVSTTGFIPPMASLEDKGKPFNSKVIIATTNLYSGFTPRTMVCPDALNRRFHFDIDVSAKDGYKINNKLDIIKALEDTHTNPVAMFQYDCALLNGMAVEMKRMQQDMFKPQPPLQNVYQLVQEVIERVELHEKVSSHPIFKQISIPSQKSVLYFLIEKGQHEAAIEFFEGMVHDSIKEELRPLIQQTSFVKRAFKRLKENFEIVALCLTLLANIVIMIRETRKRQKMVDDAVSEYIERANITTDDKTLDEAEKNPLETSGASTVGFRERPLPGQKARNDENSEPAQPAEEQPQAEGPYAGPLERQKPLKVRAKLPQQEGPYAGPMERQKPLKVKAKAPVVKEGPYEGPVKKPVALKVKAKNLIVTESGAPPTDLQKLVMGNTKPVELILDGKTVAICCATGVFGTAYLVPRHLFAEKYDKIMLDGRAMTDSDYRVFEFEIKVKGQDMLSDAALMVLHRGNRVRDITKHFRDTARMKKGTPVVGVINNADVGRLIFSGEALTYKDIVVCMDGDTMPGLFAYKAATKAGYCGGAVLAKDGADTFIVGTHSAGGNGVGYCSCVSRSMLLKMKAHVDPEPHHEGLIVDTRDVEERVHVMRKTKLAPTVAHGVFNPEFGPAALSNKDPRLNDGVVLDEVIFSKHKGDTKMSEEDKALFRRCAADYASRLHSVLGTANAPLSIYEAIKGVDGLDAMEPDTAPGLPWALQGKRRGALIDFENGTVGPEVEAALKLMEKREYKFACQTFLKDEIRPMEKVRAGKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVGCNPDVDWQRFGTHFAQYRNVWDVDYSAFDANHCSDAMNIMFEEVFRTEFGFHPNAEWILKTLVNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALRRHYEGVELDTYTMISYGDDIVVASDYDLDFEALKPHFKSLGQTITPADKSDKGFVLGHSITDVTFLKRHFHMDYGTGFYKPVMASKTLEAILSFARRGTIQEKLISVAGLAVHSGPDEYRRLFEPFQGLFEIPSYRSLYLRWVNAVCGDA

Annotated regions:
phrase: PTVAHGVFNPEFGPAALSNKDPRLNDGVVLDEVIFSKHKGDTKMSEEDKALFRRCAADYASRLHSVLGTANAPLSIYEAIKGVDGLDAMEPDTAPGLPWALQGKRRGALIDFENGTVGPEVEAALKLMEKREYKFACQTFLKDEIRPMEKVRAGKTRIVDVLPVEHILYTRMMIGRFCAQMHSNNGPQIGSAVGCNPDVDWQRFGTHFAQYRNVWDVDYSAFDANHCSDAMNIMFEEVFRTEFGFHPNAEWILKTLVNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALRRHYEGVELDTYTMISYGDDIVVASDYDLDFEALKPHFKSLGQTITPADKSDKGFVLGHSITDVTFLKRHFHMDYGTGFYKPVMASKTLEAILSFARRGTIQEKLISVAGLAVHSGPDEYRRLFEP
type: DOMAIN
name: RNA-dir_pol_C
description: RNA-directed RNA polymerase, C-terminal domain

phrase: TTQSSVGVTHGYSTEEDHVAGPNTSGLETRVVQAERFYKKYLFDWTTDKAFGHLEKLELPSDHHGVFGHLVDSYAYMRNGWDVEVSAVGNQFNGGCLLVAMVPEWKEFDTREKYQLTLFPHQFISPRTNMTAHITVPYLGVNRYDQYKKHKPWTLVVMVVSPL
type: DOMAIN
name: Picornavirus_capsid
description: Picornavirus capsid

phrase: NPPRTNYPGRFTNLLDVAEACPTFLCFDDGKPYVTTRTDDTRLLAKFDLSLAAKHMSNTYLSGIAQYYTQYSGTINLHFMFTGSTDSKARYMVAYIPPGVETPPDTPERAAHCIHAEWDTGLNSKFTFSIPYVSAADYAYTASDTAETINVQGW
type: DOMAIN
name: Picornavirus_capsid
description: Picornavirus capsid

phrase: RNVWDVDYSAFDANHCSDAMNIMFEEVFRTEFGFHPNAEWILKTLVNTEHAYENKRITVEGGMPSGCSATSIINTILNNIYVLYALRRHYEGVELDTYTMISYGDDIVVASDYDLDFE
type: DOMAIN
name: RNA-dir_pol_PSvirus
description: RNA-directed RNA polymerase, catalytic domain

phrase: APPTDLQKLVMGNTKPVELILDGKTVAICCATGVFGTAYLVPRHLFAEKYDKIMLDGRAMTDSDYRVFEFEIKVKGQDMLSDAALMVLHRGNRVRDITKHFRDTARMKKGTPVVGVINNADVGRLIFSGEALTYKDIVVCMDGDTMPGLFAYKAATKAGYCGGAVLAKDGADTFIVGTHSAGGN
type: DOMAIN
name: Peptidase_C3A/C3B_picornavir
description: Peptidase C3A/C3B, picornaviral

phrase: APPTDLQKLVMGNTKPVELILDGKTVAICCATGVFGTAYLVPRHLFAEKYDKIMLDGRAMTDSDYRVFEFEIKVKGQDMLSDAALMVLHRGNRVRDITKHFRDTARMKKGTPVVGVINNADVGRLIFSGEALTYKDIVVCMDGDTMPGLFAYKAATKAGYCGGAVLAKDGADTFIVGTHSAGGNGVGYCSCVSRSM
type: DOMAIN
name: PCV_3C_PRO
description: Picornavirales 3C/3C-like protease domain

phrase: TTTVENYGGETQIQRRHHT
type: DOMAIN
name: FMDV_VP1_coat
description: Foot-and-mouth disease virus VP1 coat

phrase: FIMDRFVKIQSLSPTHVIDLM
type: DOMAIN
name: FMDV_VP1_coat
description: Foot-and-mouth disease virus VP1 coat

phrase: TYYFSDLEIVVRHEGNLTWVPNGA
type: DOMAIN
name: FMDV_VP1_coat
description: Foot-and-mouth disease virus VP1 coat

phrase: ALLNTSNPTAYNKAPFTRLA
type: DOMAIN
name: FMDV_VP1_coat
description: Foot-and-mouth disease virus VP1 coat

phrase: PYTAPHRVLATVYNGTSK
type: DOMAIN
name: FMDV_VP1_coat
description: Foot-and-mouth disease virus VP1 coat

phrase: RGDMGSLAARVVKQLPASFNY
type: DOMAIN
name: FMDV_VP1_coat
description: Foot-and-mouth disease virus VP1 coat

phrase: AIKADAIHELLVR
type: DOMAIN
name: FMDV_VP1_coat
description: Foot-and-mouth disease virus VP1 coat

phrase: MKRAELYCPRPLLAIEV
type: DOMAIN
name: FMDV_VP1_coat
description: Foot-and-mouth disease virus VP1 coat

phrase: DRHKQKIIAPAKQL
type: DOMAIN
name: FMDV_VP1_coat
description: Foot-and-mouth disease virus VP1 coat

phrase: NVHIANLCKVVAPAPSRSRPEPVVVCLRGKSGQGKSFLANVLAQAISTHFTGRTDSVWYCPPDPDHFDGYNQQTVVVMDDLGQNPDGKDFKYFAQMVSTTGFIPPMASLEDKGKPFNSKVIIATTNLYSGFTPRTMVCPDALNRRFHFDIDVSAKDGYKINNKL
type: DOMAIN
name: Helicase_SF3_ssRNA_vir
description: Helicase, superfamily 3, single-stranded RNA virus

phrase: KFDLSLAAKHMSNTYLSGIAQYYTQYSGTINLHFMFTGSTDSKARYMVAYIPPGVETPPDTPERAAHCIHAEWDTGLNSKFTFSIPYVSAADYAYTASDTAETINVQGWVCIYQITHGKAENDTLVVSVSAGKDFELRLPIDP
type: DOMAIN
name: Rhv-like
description: Picornavirus/Calicivirus coat protein

phrase: GAGQSSPATGSQNQSGNTGSIINNYYMQQYQNSMDTQLGDNAISGGSNEGSTDTTSTHTTNTQNNDWFSKLASSAFTGLFGAL
type: DOMAIN
name: Capsid_VP4_Picornavir
description: Capsid protein VP4, Picornavirus

phrase: IGFIMDRFVKIQSLSPTHVIDLMQTHQHGLVGALLRAATYYFSDLEIVVRHEGNLTWVPNGAPESALLNTSNPTAYNKAPFTRLALPYTAPHRVLATVYNGTSKYAVGGSGRRGDMGSLAARVVKQLPASFNYGAIKADAIHELLVRMKRAELYCPRPL
type: DOMAIN
name: Rhv-like
description: Picornavirus/Calicivirus coat protein

phrase: LFDWTTDKAFGHLEKLELPSDHHGVFGHLVDSYAYMRNGWDVEVSAVGNQFNGGCLLVAMVPEWKEFDTREKYQLTLFPHQFISPRTNMTAHITVPYLGVNRYDQYKKHKPWTLVVMVVSPLTVNNTSAAQIKVYANIAPTYVHVAGELPS
type: DOMAIN
name: Rhv-like
description: Picornavirus/Calicivirus coat protein

phrase: VCLRGKSGQGKSFLANVLAQAISTHFTGRTDSVWYCPPDPDHFDGYNQQTVVVMDDLGQNPDGKDFKYFAQMVSTTGFIPPMASLEDKGKPFNSKVIIATTN
type: DOMAIN
name: Helicase_SF3_ssDNA/RNA_vir
description: Helicase, superfamily 3, single-stranded DNA/RNA virus

phrase: MEFTLHNGERKVFYSRPNNHDNCWLNTILQLFRYVGEPFFDWVYDSPENLTLEAIEQLEELTGLELHEGGPPALVIWNIKHLLHTGIGTASRPSEVCMVDGTNMCLADFHAGIFLKGQEHAVFACVTSNGWYAIDDEDFYPWTPDPSDVLVFV
type: DOMAIN
name: Peptidase_C28
description: Peptidase C28, foot-and-mouth virus L-proteinase

phrase: MNTTDCFIALVHAIREIRAFFLPRATGRMEFTLHNGERKVFYSRPNNHDNCWLNTILQLFRYVGEPFFDWVYDSPENLTLEAIEQLEELTGLELHEGGPPALVIWNIKHLLHTGIGTASRPSEVCMVDGTNMCLADFHAGIFLKGQEHAVFACVTSNGWYAIDDEDFYPWTPDPSDVLVFVPYDQEPLNGEWKTKVQQKL
type: DOMAIN
name: Peptidase_C28
description: Peptidase C28, foot-and-mouth virus L-proteinase