nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTSMASLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSSPGQPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLDICEFPFGSKQKEVCINPYHYKRVESPVLPPVLVPRHNEFNPQHSLLVQFRNLSHNEPHMPQNATFPDSFHQPNSTPFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPADTPPPAYMPPDDQMGQDNSQPMDTSNNMIPQIMPSISSRDVQPVAYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVDGFTDPANNKSRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNCNFHHGFHPTTVCKIPSSCSLKIFNNQEFAQLLAQSVNHGFEAVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPLNPISSVS

Annotated regions:
phrase: PAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSSPGQPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLDICEFPFGSKQKEVCINPYHYKRVESPVL
type: DOMAIN
name: MAD_homology_MH1
description: MAD homology, MH1

phrase: EKAVDALVKKLKKKKGAMEELEKALSSPGQPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLDICEFPFGSKQKEVCINPYHYKRV
type: DOMAIN
name: MAD_homology1_Dwarfin-type
description: MAD homology 1, Dwarfin-type

phrase: KHWCSIVYYELNNRVGEAFHASSTSVLVDGFTDPANNKSRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNCNFHHGFHPTTVCKIPSSCSLKIFNNQEFAQLLAQSVNHGFEAVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHL
type: DOMAIN
name: SMAD_dom_Dwarfin-type
description: SMAD domain, Dwarfin-type

phrase: KHWCSIVYYELNNRVGEAFHASSTSVLVDGFTDPANNKSRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNCNFHHGFHPTTVCKIPSSCSLKIFNNQEFAQLLAQSVNHGFEAVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHL
type: DOMAIN
name: SMAD_dom_Dwarfin-type
description: SMAD domain, Dwarfin-type

phrase: EEEKWAEKAVDALVKKLKKKKGAMEELEKALSSPGQPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLDICEFPFGSKQKEVCINPYHYKRVESP
type: DOMAIN
name: MAD_homology1_Dwarfin-type
description: MAD homology 1, Dwarfin-type

phrase: WCSIVYYELNNRVGEAFHASSTSVLVDGFTDPANNKSRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNCNFHHGFHPTTVCKIPSSCSLKIFNNQEFAQLLAQSVNHGFEAVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPLNPISSV
type: DOMAIN
name: SMAD_dom_Dwarfin-type
description: SMAD domain, Dwarfin-type
Protein sequence:
MKLGVSTSLFLDTDKNLSDALEILEERVKYVELGCDGNLNVMSDGNIELAQSYDLKYTLHCPITDLNLSSYRERIRKVSLDFVRDVLEVAIKVDAKLIVLHPGYCVFKYDYEKALNSLIKSLNDLNNIQEEFGVQITIENMPSYDMFMFRNPDKEIIENLGELKITLDIGHSFLNKNIENFLKISDKIAHIHIHDNNGEFDEHLCIGKGKINFNNFKKDLKKINAIKMIELQNKSIDDLDLCIDNLKEILR

Annotated regions:
phrase: ELAQSYDLKYTLHCPITDLNLSSYRERIRKVSLDFVRDVLEVAIKVDAKLIVLHPGYCVFKYDYEKALNSLIKSLNDLNNIQEEFGVQITIENMPSYDMFMFRNPDKEIIENLGELKITLDIGHSFLNKNIENFLKISDKIAHIHIHDNNGEFDEHLCIGKGKINFNNFKKDLKKINAIKMIELQ
type: DOMAIN
name: Xyl_isomerase-like_TIM-brl
description: Xylose isomerase-like, TIM barrel domain
Protein sequence:
MSQSKAFHLKVDDNKVAWLSIDVPGEKMNTLQSAFVSEIKDILVELESYQDELKGVIIHSDKPDNFIAGADIRMLAECKTAQEAQALAVQGQEMFQALSDLPYPVVAAIHGPCLGGGLELALACDYRVCTDSDKTRLGLPEVQLGLLPGSGGTQRLSRLIGLLPSLDMILTGKQLRAKKAKKLGVVDACVPQSILFDVALSMLEKASKNKHKKKKSSTKEKLMSNTGLGRKVIFEQAAKKTAQKTRGNYPAVDSILEVIRYGLEKGIKKGLEQEAKRFGELVMTDESKALRSIFFATTEMKKEHGSSAEPASIDQVAVLGGGLMGAGISHVTVTKAKLPVRIKDVSNDGVLNALRYNNKLFDKQRKRRIISKAQQQSKMMQISGGIDFARFNTMDVVIEAVFEDLDLKQQMVADVESYVKESTIFATNTSSLPIAKIAEKALRPQNVIGLHYFSPVEKMPLVEVIPHQSTSDETISTVVALAKKQGKTPIVVKDCAGFYVNRILAPYMNEAAEVLLSGEPIEHLDKALLNFGFPVGPITLLDEVGIDIGAKIMPILVSELGERFQGPDVFDTLLNDGRKGRKSNKGFYSYKGKKKDVDKSVYKLLKLNPDIRSSEKDIAIRCTLLMLNEAVRCLDEGIIRSPRDGDIGAIFGIGFPPFLGGPFRYIDKLGVKTVVEMLNQHAERYGNRFAPCDGLLTRAEIGESFYPDAKKSQDEPQGDNAE

Annotated regions:
phrase: VAAIHGPCLGGGLELALACD
type: CONSERVED_SITE
name: Enoyl-CoA_hyd/isom_CS
description: Enoyl-CoA hydratase/isomerase, conserved site

phrase: QVAVLGGGLMGAGISHVTVTKAKLPVRIKDVSNDGVLNALRYNNKLFDKQRKRRIISKAQQQSKMMQISGGIDFARFNTMDVVIEAVFEDLDLKQQMVADVESYVKESTIFATNTSSLPIAKIAEKALRPQNVIGLHYFSPVEKMPLVEVIPHQSTSDETISTVVALAKKQGKTPIVVKD
type: DOMAIN
name: 3-OHacyl-CoA_DH_NAD-bd
description: 3-hydroxyacyl-CoA dehydrogenase, NAD binding

phrase: GFYVNRILAPYMNEAAEVLLSGEPIEHLDKALLNFGFPVGPITLLDEVGIDIGAKIMPILVSELGERFQGPDVFDTLLNDGRKGRKSNKGFYS
type: DOMAIN
name: 3HC_DH_C
description: 3-hydroxyacyl-CoA dehydrogenase, C-terminal

phrase: DCAGFYVNRILAPYMNEAAEVLLSG
type: CONSERVED_SITE
name: 3-OHacyl-CoA_DH_CS
description: 3-hydroxyacyl-CoA dehydrogenase, conserved site
Protein sequence:
MSDSILDPIEDVIAAIARGEIVVIVDDEDRENEGDFIMAAEFATPEKLAFIVRYSTGVVCCPLTDERCDDLRLPLMVEQNTESQRTAFTDTVDLIEGTSTGISAADRAATLRALADPTLTYKAFARPGHIFPLRARPGGVLKRAGHTEAAVDLARLAGCQPAGIICEIQNDDGTMMRLNDLRKFCNEHGLLLSSIAQLIEYRRHHERLVERMGEATVPTEFGSFTCVAYRSTIDGVEHLAFVKGEVSSSTPVLVRVHSECLTGDVFGSRRCDCGPQLAAAMSIVDAEGSGVIVYLRGHEGRGIGIGHKIRAYSLQDQGMDTVDANVELGLPIDSREYGIGAQILADLGVQQIRLMTNNPAKYGGLGGYGLTVVERVPLHTVPTAENESYLRTKAERMGHLMNLDQQKGANQ

Annotated regions:
phrase: RMGEATVPTEFGSFTCVAYRSTIDGVEHLAFVKGEVSSSTPVLVRVHSECLTGDVFGSRRCDCGPQLAAAMSIVDAEGSGVIVYLRGHEGRGIGIGHKIRAYSLQDQGMDTVDANVELGLPIDSREYGIGAQILADLGVQQIRLMTNNPAKYGGLGGYGLTVVERV
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MNKPSEVKPVALNVPDYVKHSGLIAWVERIAALTKPDRVVWCDGSQEEYDRLCEQMVQGGTMRRLNPAKRANSYLACSDPSDVARVEDRTFICSEREEDAGPTNNWAAPQAMRETLGGLFDGAMRGRTMYVVPFSMGPLGSPIAHIGVELSDSPYVVVNMRIMTRMGRKVFDVLGSDGAFVPCVHSVGMPLAEGQQDVAWPCNPTKYIVHYPETREIWSFGSGYGGNALLGKKCFALRIASTMGRDEGWLAEHMLILGVTSPKGRKYHVAAAFPSACGKTNFAMLIPPHGMDGWKVTTIGDDIAWIKPGPDGRLHAINPEAGYFGVAPGTSEKTNFNAMATLKANVIFTNVALTDDGDVWWEGMTDTPPAHLIDWQGQDWTPAIAAETGRKAAHPNARFTAPAAQCPSIDPEWENPKGVAIDAFIFGGRRSTTVPLVTEARNWVEGVYMAATMGSETTAAAAGQQGVVRRDPFAMLPFCGYNMSDYFDHWLKLGRRLEETGATLPRIYCVNWFRKGPDGKFVWPGFGENMRVLRWMLGRLDGQAGGVDQVFGISPAYGDIDWTGLEFSPDKFEQVISVDLPAWRAELALHDELFTQLAARLPEDLPLTRTAIERRMAA

Annotated regions:
phrase: FPSACGKT
type: CONSERVED_SITE
name: PEP_carboxykin_GTP_CS
description: Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site

phrase: WLAEHMLILGVTSPKGRKYHVAAAFPSACGKTNFAMLIPPHGMDGWKVTTIGDDIAWIKPGPDGRLHAINPEAGYFGVAPGTSEKTNFNAMATLKANVIFTNVALTDDGDVWWEGMTDTPPAHLIDWQGQDWTPAIAAETGRKAAHPNARFTAPAAQCPSIDPEWENPKGVAIDAFIFGGRRSTTVPLVTEARNWVEGVYMAATMGSETTAAAAGQQGVVRRDPFAMLPFCGYNMSDYFDHWLKLGRRLEETGATLPRIYCVNWFRKGPDGKFVWPGFGENMRVLRWMLGRLDGQAGGVDQVFGISPAYGDIDWTGLEFSPDKFEQVISVDLPAWRAELALHDELFTQLAARLPEDLPLTRTAI
type: DOMAIN
name: PEP_carboxykinase_GTP_C
description: Phosphoenolpyruvate carboxykinase, C-terminal P-loop domain

phrase: WVERIAALTKPDRVVWCDGSQEEYDRLCEQMVQGGTMRRLNPAKRANSYLACSDPSDVARVEDRTFICSEREEDAGPTNNWAAPQAMRETLGGLFDGAMRGRTMYVVPFSMGPLGSPIAHIGVELSDSPYVVVNMRIMTRMGRKVFDVLGSDGAFVPCVHSVGMPLAEGQQDVAWPCNPTKYIVHYPETREIWSFGSGYGGNALLGKKCFALRIASTMG
type: DOMAIN
name: PEP_carboxykinase_GTP_N
description: Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal
Protein sequence:
MQPYIELVRRYVYRRILIEFGDDELGKLAVAIFNTLLSRGEAMTDDKLTSIVGYNAIDVRRILQALYNMRLASVVEEFNEAAGRIEQSWSIKDEDIRRFLINLIGGVLDKVGVLMQQLTNTPIYICPKCFKRYSEDDALMYDYKCPLDRTPLEYINPADYLTVLGAVEARLKKMMESVSKGSV

Annotated regions:
phrase: KLAVAIFNTLLSRGEAMTDDKLTSIVGYNAIDVRRILQALYNMRLASVVEEFNEAAGRIEQSWSIKDEDIRRFLINLIGGVLDKVGVLMQQLTNTPIYICPKCFKRYSEDDALMYDYKCPLDRTPLEYINPADYLTVLG
type: DOMAIN
name: TFIIE_asu
description: Transcription initiation factor IIE subunit alpha, N-terminal

phrase: YIELVRRYVYRRILIEFGDDELGKLAVAIFNTLLSRGEAMTDDKLTSIVGYNAIDVRRILQALYNMRLASVVEEFNEAAGRIEQSWSIKDEDI
type: DOMAIN
name: TFIIE/TFIIEa_HTH
description: Transcription factor TFE/TFIIEalpha HTH domain

phrase: LGKLAVAIFNTLLSRGEAMTDDKLTSIVGYNAIDVRRILQALYNMRLASVVEEFNEAAGRIEQSWSIKDEDIR
type: DOMAIN
name: TFIIEa/SarR/Rpc3_HTH_dom
description: TFIIEalpha/SarR/Rpc3 HTH domain
Protein sequence:
MFAVIKAGGKQYKVDRNSVIKIEKIDGELGSKVQFDQILMIGEYSKPSFIGTPIVKGAIVTAEITNQLKDNKIIAFKKKRRKNYRRKAGHRQELTELKILDITKQ

Annotated regions:
phrase: IIAFKKKRRKNYRRKAGHRQEL
type: CONSERVED_SITE
name: Ribosomal_bL21_CS
description: Large ribosomal subunit protein bL21, conserved site
Protein sequence:
MRSAQVYRWQIPMDAGVVLRDRRLKTRDGLYVCLREGEREGWGEISPLPGFSQETWEDAQSVLLAWVNNWLAGDCEIPQMPSVAFGVSCALAELAETLPQAANYRAAPLCNGDPDDLILKLADMPGEKVAKVKVGLYEAVRDGMVVNLLLEAIPDLHLRLDANRAWTPLKGQQFAKYVNPDYRHRIAFLEEPCKTRDDSRAFARETGIAIAWDESLREPDFAFVAEEGVRAVVIKPTLTGSLDKVREQVQAAHALGLTAVISSSIESSLGLTQLARIAAWLTPDTIPGLDTLDLMQAQQVRRWPGSPLPLVDVDALERLL

Annotated regions:
phrase: ADMPGEKVAKVKVGLYEAVRDGMVVNLLLEAIPDLHLRLDANRAWTPLKGQQFAKYVNPDYRHRIAFLEEPCKTRDDSRAFARETGIAIAWDESLREPDFAFVAEEGVRAVVIKPTLTGSLDKVREQVQAAHALGLTAVISSSIESSLGLTQLARIAAWL
type: DOMAIN
name: Enolase_C-like
description: Enolase C-terminal domain-like

phrase: PDDLILKLADMPGEKVAKVKVGLYEAVRDGMVVNLLLEAIPDLHLRLDANRAWTPLKGQQFAKYVNPDYRHRIAFLEEPCKTRDDSRAFARETGI
type: DOMAIN
name: Mandelate_racemase_C
description: Mandelate racemase/muconate lactonizing enzyme, C-terminal

phrase: MRSAQVYRWQIPMDAGVVLRDRRLKTRDGLYVCLREGEREGWGEISPLPGFSQETWEDAQSVLLAWVNNWLAGDCEIPQMPSVAFGVSCALAE
type: DOMAIN
name: OSBS_N
description: OSBS, enolase-like N-terminal domain
Protein sequence:
MASDSSFPGASSNVAEYSVSEISGALKRTVEDTFGHVRVRGEISGYRGPHSSGHAYFALKDDRARLEAVIWRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPAGAGALMALLEERKQRLAAEGLFDPTLKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRVQGDTCGPEVATAVNGFNTLPDDGPIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHIPVISAVGHETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQASLASQSARLSSAMSRFFDQKRQAHRAAARAMPSADQLLALPRRRFDEAASRLTRALFVNTQKKRVHFDGHARQLSPRLLQRRLVELERGVTMLGQRLPRALEAFLRERRTAFTHRANRLSPEPILRRTRLTGSTLEQLDRRRDQAVRLLIERVKRRSQELDRLMRTLSYESVLERGFAVVFDAQGKPVKQAAAVSPGDALSVRFRDGDVGVVARAGLTIPDPTKGQ

Annotated regions:
phrase: LFDPTLKQLLPFMPRVIGVVTSPTGAVIRDIIHRISDRYPLRVIVWPVRVQGDTCGPEVATAVNGFNTLPDDGPIPRPDVLIVARGGGSLEDLWGFNDEIVVRAVAASHIPVISAVGHETDWTLIDLAADMRAPTPTGAAEMAVPVKADLQASLASQSARLSSAMSRFFDQKRQAHRAAARAMPSADQLLALPRRRFDEAASRLTRALFVNTQKKRVHFDGHARQLSPRLLQRRLVELERGVTMLGQRLPRALEAFLRERRTAFTHRANRLSPEPILRRTRLTGSTLEQLDRRRDQAVRLLIERVKRRSQELDRLMRTLSYESVLERGFAVVFDAQGKPVKQAAAVSPGDALSVRFRDGDV
type: DOMAIN
name: Exonuc_VII_lsu_C
description: Exonuclease VII, large subunit, C-terminal

phrase: YSVSEISGALKRTVEDTFGHVRVRGEISGYRGPHSSGHAYFALKDDRARLEAVIWRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQM
type: DOMAIN
name: OB-fold_nuc-bd_dom
description: OB-fold nucleic acid binding domain

phrase: HVRVRGEISGYRGPHSSGHAYFALKDDRARLEAVIWRGSMSRLRFRPEEGMEVIATGKLTTYPGSSKYQIVIEQMEPA
type: DOMAIN
name: OB-fold_nuc-bd_dom
description: OB-fold nucleic acid binding domain
Protein sequence:
AKDKEKKEKKDKKKDDAPAEEAPAAAAAPAEEAAPTPSAAPIHKVGNVFALFKQNQIQEFKEAFTMIDQDRDGIIGPDDLGNIFQQIGREVDPKVVKEMLAESAEKLNFTHFLTLFGEKLHGTDTEGTLRDAFALFDEDKLGYLLEEYVKDLLTNVGDQYNKDEIKQVWKEAPIEGGKFDYVKFVRLIKRGKEEE

Annotated regions:
phrase: NQIQEFKEAFTMIDQDRDGIIGPDDLGNIFQQIGR
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: DQDRDGIIGPDD
type: BINDING_SITE
name: EF_Hand_1_Ca_BS
description: EF-Hand 1, calcium-binding site

phrase: DTEGTLRDAFALFDEDKLGYLLEEYVKDLLTNVGD
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: EFKEAFTMIDQDRDGIIGPDDLGNIFQQI
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: TLRDAFALFDEDKLGYLLEEYVKDLLTN
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: EFKEAFTMIDQDRDGIIGPDDLGNIFQQ
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain
Protein sequence:
MITGIQITKSANDDLLNSIWLLDSETNEARCVVAKAGFEEDQVIAAADLGEYESRDVAIEVPAKVEGGQHLNVNVLKKETLEDAVAHPEKYPQLTIRVSGYAVRFNSLTTEQQKDVIARTFTSSL

Annotated regions:
phrase: LLNSIWLLDSETNEARCVVAKAGFEEDQVIAAADLGEYESRDVAIEVPAKVEGGQHLNVNVLKKETLEDAVAHPEKYPQLTIRVSGYAVRF
type: DOMAIN
name: Gly_radical
description: Glycine radical domain

phrase: TIRVSGYA
type: CONSERVED_SITE
name: Form_AcTrfase_GR_CS
description: Formate C-acetyltransferase glycine radical, conserved site

phrase: IQITKSANDDLLNSIWLLDSETNEARCVVAKAGFEEDQVIAAADLGEYESRDVAIEVPAKVEGGQHLNVNVLKKETLEDAVAHPEKYPQLTIRVSGYAVRFNSLTTEQQKDVIARTFTSS
type: DOMAIN
name: Gly_radical
description: Glycine radical domain
Protein sequence:
MKVKGMRKNYQHWWRWGTMLLGMLMICSAAEQLWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPSPQEVVLENVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTDWRNATNINATQITNGTLEGGEVKNCSFNITTRLRDKVQKKYALFYTLDVVPIREDNSNTSYRLVSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNNETFDGKGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEKGIVLRSENFSDNAKTIIVQLTTPVKINCTRPNNNTRRSIHLGPGKAIYTTGEIIGDIRRAHCNISRKEWNDTLTQIVTKLREHFKNKTIVFNQSSGGDPEIVMHTFNCGGEFFYCNSTQLFNSKWEGNSTWNSTGESNNTAENIILPCRIKQIVNMWQEVGKAIYAPPISGPIRCSTNITGLLLTRDGGKDENQTEIFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQREKRAVGMGALFLGFLGAAGSTMGAASITLTAQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTTVPWNVSWSNKSLDKIWNNMTWMEWEREIDNYTDTIYRLIEQSQNQQEKNEQELLEFDKWANLWNWFNISNWLWYIKIFIMIVGGLIGLRIVFTVLSIVNRVRQGYSPLSFQTLLPAQRGPDRPGGIEEEGGERDSARSSRLANGFLAIFWVDLRSLFLFSY

Annotated regions:
phrase: MGAASITLTAQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTTVPWNVSWSNKSLDKIWNNMTWMEWEREIDNYTDTIYRLIEQSQNQQEKNEQELLEFDKWANLWNWFNISNWLWYIKIFIMIVGGLIGLRIVFTVLSIVNRVRQGYSPLSFQT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPSPQEVVLENVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTDWRNATNINATQITNGTLEGGEVKNCSFNITTRLRDKVQKKYALFYTLDVVPIREDNSNTSYRLVSCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNNETFDGKGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEKGIVLRSENFSDNAKTIIVQLTTPVKINCTRPNNNTRRSIHLGPGKAIYTTGEIIGDIRRAHCNISRKEWNDTLTQIVTKLREHFKNKTIVFNQSSGGDPEIVMHTFNCGGEFFYCNSTQLFNSKWEGNSTWNSTGESNNTAENIILPCRIKQIVNMWQEVGKAIYAPPISGPIRCSTNITGLLLTRDGGKDENQTEIFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: AQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTTVPWNVSWSNKSLDKIWNNMTWMEWEREIDNYTDTIYRLIEQSQNQQEKNEQELLEFD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MKLTILTKRFRSSSPLRTSGSPTDTNPATQGQSTQTARKAETKGSRHHPKSPAVRKRRPYGRRRSRSPRDTTLRRGEGESARASAGSGERVAFISPGDVGTSTRSPPKGGQSRLRRLIQEARDPPIICLKGGPNQLKCLRYRIKASNSSDFESISTTWHWVHNKCTDRVGHARMLVRFISTEQRDRFLDKVVVPKSVSVILGAFDGS

Annotated regions:
phrase: PIICLKGGPNQLKCLRYRIKASNSSDFESISTTWHWVHNKCTDRVGHARMLVRFISTEQRDRFLDKVVVPKSVSVIL
type: DOMAIN
name: Papillomavirus_E2_C
description: Papillomavirus E2, C-terminal
Protein sequence:
MWMRRNQIVRKLTLGVVTTVLGMSLSFSALSATPVETHGQLSIENGRLVDEQGKRVQLRGISSHGLQWFGDYVNKDSMKWLRDDWGINVFRVAMYTAADGYISNPSLANKVKEAVAAAQSLGVYIIIDWHILSDNDPNIYKAQAKTFFAEMAGLYGSSPNVIYEIANEPNGGVTWNGQIRPYALEVTDTIRSKDPDNLIIVGTGTWSQDIHDAADNQLPDPNTMYALHFYAGTHGQFLRDRIDYAQSRGAAIFVSEWGTSDASGNGGPFLPESQTWIDFLNNRGVSWVNWSLTDKSEASAALAPGASKSGGWTEQNLSTSGKFVREQIRAGANLGGGDTPTTPTEPTNPGNGTTGDVVLQYRNVDNNPSDDAIRMAVNIKNTGSTPIKLSDLQVRYYFHDDGKPGANLFVDWANVGPNNIVTSTGTPAASTDKANRYVLVTFSSGAGSLQPGAETGEVQVRIHAGDWSNVNETNDYSYGANVTSYANWDKITVHDKGTLVWGVEP

Annotated regions:
phrase: VIYEIANEP
type: CONSERVED_SITE
name: Glyco_hydro_5_CS
description: Glycoside hydrolase, family 5, conserved site

phrase: TTGDVVLQYRNVDNNPSDDAIRMAVNIKNTGSTPIKLSDLQVRYYFHDDGKPGANLFVDWANVGPNNIVTSTGTPAASTDKANRYVLVTFSSGAGSLQPGAETGEVQVRIHAGDWSNVNETNDYSYGANVTSYANWDKITVHDKGTLVWGVE
type: DOMAIN
name: CBM3
description: Carbohydrate-binding module 3

phrase: VDEQGKRVQLRGISSHGLQWFGDYVNKDSMKWLRDDWGINVFRVAMYTAADGYISNPSLANKVKEAVAAAQSLGVYIIIDWHILSDNDPNIYKAQAKTFFAEMAGLYGSSPNVIYEIANEPNGGVTWNGQIRPYALEVTDTIRSKDPDNLIIVGTGTWSQDIHDAADNQLPDPNTMYALHFYAGTHGQFLRDRIDYAQSRGAAIFVSEWGTSDASGNGGPFLPESQTWIDFLNNRGVSWVNWSLTDK
type: DOMAIN
name: Glyco_hydro_5
description: Glycoside hydrolase, family 5

phrase: LQYRNVDNNPSDDAIRMAVNIKNTGSTPIKLSDLQVRYYFHDDGKPGANLFVDWANVGPNNIVTSTGTPAASTDKANRY
type: DOMAIN
name: CBM3
description: Carbohydrate-binding module 3

phrase: LQYRNVDNNPSDDAIRMAVNIKNTGSTPIKLSDLQVRYYFHDDGKPGANLFVDWANVGPNNIVTSTGTPAASTDKANRYVLV
type: DOMAIN
name: CBM3
description: Carbohydrate-binding module 3
Protein sequence:
MDRAQKAELVADLKSTFEGTSVVIVTRNLGLTVAQSTALRTKMREAGASYKVSKNKLARIALEGTTYQAINDLLVGPTALATSADPVAPAKVIVDFAKTNDKLEIVGGAMGETVLDVAGVKALAELPSLDELRAKIVGLIQAPATKVVQIVQAPAGQLARVFGAYAAKEDA

Annotated regions:
phrase: KAELVADLKSTFEGTSVVIVTRNLGLTVAQSTAL
type: CONSERVED_SITE
name: Ribosomal_uL10_CS_bac
description: Large ribosomal subunit protein uL10, conserved site, bacteria
Protein sequence:
MASLDNLVARYQRCFNDQSLKNSTIELEIRFQQINFLLFKTVYEALVAQEIPSTISHSIRCIKKVHHENHCREKILPSENLYFKKQPLMFFKFSEPASLGCKVSLAIEQPIRKFILDSSVLVRLKNRTTFRVSELWKIELTIVKQLMGSEVSAKLAAFKTLLFDTPEQQTTKNMMTLINPDDEYLYEIEIEYTGKPESLTAADVIKIKNTVLTLISPNHLMLTAYHQAIEFIASHILSSEILLARIKSGKWGLKRLLPQVKSMTKADYMKFYPPVGYYVTDKADGIRGIAVIQDTQIYVVADQLYSLGTTGIEPLKPTILDGEFMPEKKEFYGFDVIMYEGNLLTQQGFETRIESLSKGIKVLQAFNIKAEMKPFISLTSADPNVLLKNFESIFKKKTRPYSIDGIILVEPGNSYLNTNTFKWKPTWDNTLDFLVRKCPESLNVPEYAPKKGFSLHLLFVGISGELFKKLALNWCPGYTKLFPVTQRNQNYFPVQFQPSDFPLAFLYYHPDTSSFSNIDGKVLEMRCLKREINYVRWEIVKIREDRQQDLKTGGYFGNDFKTAELTWLNYMDPFSFEELAKGPSGMYFAGAKTGIYRAQTALISFIKQEIIQKISHQSWVIDLGIGKGQDLGRYLDAGVRHLVGIDKDQTALAELVYRKFSHATTRQHKHATNIYVLHQDLAEPAKEISEKVHQIYGFPKEGASSIVSNLFIHYLMKNTQQVENLAVLCHKLLQPGGMVWFTTMLGEQVLELLHENRIELNEVWEARENEVVKFAIKRLFKEDILQETGQEIGVLLPFSNGDFYNEYLVNTAFLIKIFKHHGFSLVQKQSFKDWIPEFQNFSKSLYKILTEADKTWTSLFGFICLRKN

Annotated regions:
phrase: GIYRAQTALISFIKQEIIQKISHQSWVIDLGIGKGQDLGRYLDAGVRHLVGIDKDQTALAELVYRKFSHATTRQHKHATNIYVLHQDLAEPAKEISEKVHQIYGFPKEGASSIVSNLFIHYLMKNTQQVENLAVLCHKLLQPGGMVWFTTMLGEQVLELLHENRIELNEVWEARENEVVKFAIKRLFKEDILQETGQEIGVLLPFSNGDFYNEYLVNTAFLIKIFKHHGFSLVQKQSFKDWIPEFQNFSKSLYKILTEADKTWTSLFGFICLRK
type: DOMAIN
name: mRNA_G-N7_MeTrfase_dom
description: mRNA (guanine-N(7))-methyltransferase domain

phrase: QEIIQKISHQSWVIDLGIGKGQDLGRYLDAGVRHLVGIDKDQTALAELVYRKFSHATTRQHKHATNIYVLHQDLAEPAKEISEKVHQIYGFPKEGASSIVSNLFIHYLMKNTQQVENLAVLCHKLLQPGGMVWFTTMLGEQVLELLHENRIELNEVWEARENEVVKFAIKRLFKEDILQETGQEIGVLLPFSNGDFYNEYLVNTAFLIKIFKHHGFSLVQKQSFKDWIPEFQ
type: DOMAIN
name: mRNA_G-N7_MeTrfase_dom
description: mRNA (guanine-N(7))-methyltransferase domain
Protein sequence:
MSTNPKPAYRRVLLKLSGEALQGSEGFGIDPAVLERMAQEIKELVELGVQVGLVIGGGNLFRGAGLAKAGMNRVVGDHMGMLATVMNGLAMRDALHRAYVNARLMSAISLQGVCDSYSWAEAISQLRAGKVVIFSAGTGNPFFTTDSAACLRGIEIEADVVLKATKVDGVFNEDPVKNPDAVLYHELSYNEVLEKELKVMDLAAFTLARDHDLPIRVFNMNKPGALRRVIMGEPEGTLIHHIGK

Annotated regions:
phrase: RVLLKLSGEALQGSEGFGIDPAVLERMAQEIKELVELGVQVGLVIGGGNLFRGAGLAKAGMNRVVGDHMGMLATVMNGLAMRDALHRAYVNARLMSAISLQGVCDSYSWAEAISQLRAGKVVIFSAGTGNPFFTTDSAACLRGIEIEADVVLKATKVDGVFNEDPVKNPDAVLYHELSYNEVLEKELKVMDLAAFTLARDHDLPIRVF
type: DOMAIN
name: Asp/Glu/Uridylate_kinase
description: Aspartate/glutamate/uridylate kinase
Protein sequence:
MVTPRRDSGSDRPSLKDARILVVEARYYDDIADELLRGATEAIAASGAEAEVVTVPGALEIPQTVAILVEAAMRSGKPYDAVVALGCVIRGETGHYDIVAGESARALMDLSVLLRLPLGNGILTVETEAQAQARARVSEMNKGGGAAEAALAVLALKRANAAEHPGRTIGFTPRRAAETAE

Annotated regions:
Protein sequence:
MCETPIGCHTPRRCNRFIDSAALIDCTNKTNQREHSPSFSIEIPTTPSRKRTLASSHFQTPTKRIKYELGELQEEKTDLYPNFPAQLKENKKPKLPTTPQTPKTPKRTIQIVTPKSLNRTCNPVPFATRLLQSTPHRQLFPPTPSTPSTPSYNSTAKLSLRKSYRSAGVVGRENEKSIVESFFRQHLDANAGGALYVSGAPGTGKTVLLHNVLDHVVSDYPKVNVCYINCMTINEPKAIFEKIHSKIVKEEILENEDHHINFQCELESHFTQSANELYNPVIIVLDEMDHLIAREQQVLYTLFEWPSRPTSRLILVGIANALDMTDRFLPRLRTKHITPKLLSFTPYTAQEISTIIKARLKTAATTSEKNNPFTPIKSISEVSDDSINVVSQHADETPFIHPAAIELCARKVAASSGDLRKALDICRHAIELAEREWKAQHDNTLSSVDIPRASIAHVVRATSAMSQSASARLKNLGLQQKAILCTLVVCEKTSLSVADVFEKYSSLCLRDRLIYPLTSSEFCDVANSLETLAIIRLRTKQRNGKPQDRIISLLVPEMDVITAVGDIGTLKRFFDRR

Annotated regions:
phrase: AGGALYVSGAPGTGKTVLLHNVLDHVVSDYPKVNVCYINCMTINEPKAIFEKIHSKIVKEEILENEDHHINFQCELESHFTQSANELYNPVIIVLDEMDHLIAREQQVLYTLFEWPSRPTSRLILVGIANALDMTDRFLPRLRTKHITPKL
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LQQKAILCTLVVCEKTSLSVADVFEKYSSLCLRDRLIYPLTSSEFCDVANSLETLAIIRLRTKQRNGKPQDRIISLLVPEMD
type: DOMAIN
name: Cdc6_C
description: Cdc6, C-terminal

phrase: LKNLGLQQKAILCTLVVCEKTSLSVADVFEKYSSLCLRDRLIYPLTSSEFCDVANSLETLAIIRLRTKQRNGKPQDRIISLLVPEMDVI
type: DOMAIN
name: Cdc6_C
description: Cdc6, C-terminal

phrase: IHPAAIELCARKVAASSGDLRKALDICRHAIELAEREWKAQH
type: DOMAIN
name: AAA_lid_10
description: AAA lid domain

phrase: VVGRENEKSIVESFFRQHLDANAGGALYVSGAPGTGKTVLLHNVLDHVVSDYPKVNVCYINCMTINEPKAIFEKIHSKIVKEEILENEDHHINFQCELESHFTQSANELYNPVIIVLDEMDHLIAREQQVLYTLFEWPSRPTSRL
type: DOMAIN
name: AAA_16
description: Orc1-like, AAA ATPase domain

phrase: LCTLVVCEKTSLSVADVFEKYSSLCLRDRLIYPLTSSEFCDVANSLETLAIIRLRTKQRNGKPQDRIISLLVPEMDVITA
type: DOMAIN
name: Cdc6_C
description: Cdc6, C-terminal
Protein sequence:
LHVQTAHHIKTATTNRNQRKKVRTEALQQVKEIANAAKAIKVPTPVPVSVPVALQVPNPHHLVHHQVPVHVGRQDSGPYKQIAIQGKVPKYLQKGRWKVTQAAIKVTLHLLLLHHTTVTAGTGRKSNNQRGPRVERVTRREPWGEIAATRKVILLLLPRPQTVTRGVC

Annotated regions:
Protein sequence:
MRYSQYFIPTVKETPSDAEVISHKLMLRAGMIRKLAAGIYNYLPFGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAELWKESGRWEFYGKELLRFNDRKDAEFCMGPTHEEVITDLIRKEVRSYRQLPINLYQIQGKFRDEIRPRFGLMRGREFIMKDAYSFDVNEAGADVSYEKMYKAYRRIFERCGLKFRAVEADTGTIGGNYSHEFMVLADSGEDAIVSCSACEYAANMEKAETRKGEGIEHADPRPMEHVSTPGQKSIEDVAAFLGVQNTQVVKTLVLVADGEPVVALIRGDYDLNEIKLKNHLGCAELEMAEDDVVVKVTGAPTGYAGPVGLAAKVKVVADLSLEGMHNFVTGANAADTHLKNVNIGRDFSVSGFVDIRNVVIGDACPRCDSGKLEIWRGIEVGHVFKLGTKYSKALKATFLDADGKEQTIFMGCYGIGVGRTVAACIEQNHDENGIIFPIPIAPFQCIISSLSVKEDEVKAASESIYQELLEAGIEVLLDDRDERPGFKFKDADLIGIPLRIVVGAKALAEGKVELKERRSGEVEVLPIAEAIAKVKAAVKEALQV

Annotated regions:
phrase: GIYNYLPFGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAELWKESGRWEFYGKELLRFNDRKDAEFCMGPTHEEVITDLIRKEVRSYRQLPINLYQIQGKFRDEIRPRFGLMRGREFIMKDAYSFDVNEAGADVSYEKMYKAYRRIFERCGLKFRAVEADTGTIGGNYSHEFMVLADSGEDAIVSCSACEYAANMEKAETRKGEGIEHADPRPMEHVSTPGQKSIEDVAAFLGVQNTQVVKTLVLVADGEPVVALIRGDYDLNEIKLKNHLGCAELEMAEDDVVVKVTGAPTGYAGPVGLAAKVKVVADLSLEGMHNFVTGANAADTHLKNVNIGRDFSVSGFVDIRNVVIGDACPRCDSGKLEIWRGIEVGHVFKLGTKYSKALKATFLDADGKEQTIFMGCYGIGVGRTVAACIEQNHDENGIIF
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: RFNDRKDAEFCMGPTHEEVITDLIRKEVRSYRQLPINLYQIQGKFRDEIRPRFGLMRGREFIMKDAYSFDVNEAGADVSYEKMYKAYRRIFERCGLKFRAVEADTGTIGGNYSHEFMVLADSGEDAIVSCSACEYAANMEKAETRKGEGIEHADPRPMEHVSTPGQKSIEDVAAFLGVQNTQVVKTLVLVADGEPVVALIRGDYDLNEIKLKNHLGCAELEMAEDDVVVKVTGAPTGYAGPVGLAAKVKVVADLSLEGMHNFVTGANAADTHLKNVNIGRDFSVSGFVDIRNVVIGDACPRCDSGKLEIWRGIEVGHVFKLGTKYSKALKATFLDADGKEQTIFMGCYGIGVGRTVAACIEQ
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: TPGQKSIEDVAAFLGVQNTQVVKTLVLVADGEPVVALIRGDYDLNEIKLKNHLGCAELEMAEDDVVVKVTGAPTGYAGPVGLAAKVKVVADLSLEGMHNFVTGANAADTHLKNV
type: DOMAIN
name: YbaK/aa-tRNA-synth-assoc-dom
description: YbaK/aminoacyl-tRNA synthetase-associated domain

phrase: PFQCIISSLSVKEDEVKAASESIYQELLEAGIEVLLDDRDERPGFKFKDADLIGIPLRIVVGAKALAEGKVELKERRSGEVEVLPIAEAIAKV
type: DOMAIN
name: ProRS_anticodon_short
description: Proline--tRNA ligase, anticodon binding domain

phrase: QCIISSLSVKEDEVKAASESIYQELLEAGIEVLLDDRDERPGFKFKDADLIGIPLRIVVGAKALAEGKVELKERRSGEVEVLPIAEAIAKVK
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: DAEVISHKLMLRAGMIRKLAAGIYNYLPFGLRSIRKVEAIVREEMNRAGAIELLMPAVQPAELWKESGRWEFYGKELLRFNDRKDAEFCMGPTHEEVITDLIRKEVRSYRQLPINLYQIQGKFRDEIRPRFGLMRGREFIMKDAYSFDVNEAGADVSYEKMYKAYRRIFERCGLKFRAVEADTGTIGGNYSHEFMVLADSGEDAIVSCSACEYAANMEKAETRKGEGIEHADPRPMEHVSTPGQKSIEDVAAFLGVQNTQVVKTLVLVADGEPVVALIRGDYDLNEIKLKNHLGCAELEMAEDDVVVKVTGAPTGYAGPVGLAAKVKVVADLSLEGMHNFVTGANAADTHLKNVNIGRDFSVSGFVDIRNVVIGDACPRCDSGKLEIWRGIEVGHVFKLGTKYSKALKATFLDADGKEQTIFMGCYGIGVGRTVAACIE
type: DOMAIN
name: ProRS_core_prok
description: Prokaryote proline-tRNA ligase core domain
Protein sequence:
MFGRVLGRETVQYFEALRREVQARRGAKNRAAEAQNGGEDDAKTAFLNFAIPTPQRHQTVVPGVGTLHDCCETAQIFASVARRLLFRSLSKWQSGEARERLDPASVEAYVDPKVRQALKTISFVEYSDDEARSCRNAYYSIMNTFDALRSSDAFHQVASFVARFSRLVDTSFNGADLDGDGQQASKRARVDVPTYGKQRGTLELFQKMILMHATYFIAAVILGDHADRIGAFLKMVFNTPEFSDATIRHFRQRATVFLVPRRHGKTWFLVPLIALALATFKGIKIGYTAHIRKATEPVFDEIGARLRQWFGNSPVDHVKGENISFSFPDGSKSTIVFASSHNTNGIRGQDFNLLFVDEANFIRPEAVQTIIGFLNQTNCKIIFVSSTNTGKASTSFLYNLKGAADDLLNVVTYICDEHMERVKAHTNATACSCYILNKPVFITMDGAMRNTAELFLPDSFMQEIIGGGNVSGAHRDEPVFTKTAQDRFLLYRPSTVANQDIMSSDLYVYVDPAFTTNAMASGTGVAVVGRYRSNWVVFGMEHFFLSALTGSSAELIARCVAQCLAQVFAIHKRPFDSVRVAVEGNSSQDAAVAIATNIQLELNTLRRADVVPMPGAVLFYHCTPHGSSVAYPFFLLQKQKTGAFDHFIKAFNSGSVLASQELVSNTVRLQTDPVEYLLTQMKNLTEVVTGTSETRVFTGKRNGASDDMLVALVMAVYLSSLPPTSDAFSSLPAQ

Annotated regions:
phrase: LNQTNCKIIFVSSTNTGKASTSFLYNLKGAADDLLNVVTYICDEHMERVKAHTNATACSCYILNKPVFITMDGAMRNTAELFLPDSFMQEIIGGGNVSGAHRDEPVFTKTAQDRFLLYRPSTVANQDIMSSDLYVYVDPAFTTNAMASGTGVAVVGRYRSNWVVFGMEHFFLSALTGSSAELIARCVAQCLAQVFAIHKRPFDSVRVAVEGNSSQDAAVAIATNIQLELNTLRRADVVPMPGAVLFYHCTPHGSSVAYPFFLLQKQKTGAFDHFIKAFNSGSVLASQELVSNTVRLQTDPVEYLLTQMKNLTEVVTGTSETRVFTGKRNGASDDMLVALVMAVYLSS
type: DOMAIN
name: DNA_pack_C
description: Probable DNA packing protein, C-terminal

phrase: RHQTVVPGVGTLHDCCETAQIFASVARRLLFRSLSKWQSGEARERLDPASVEAYVDPKVRQALKTISFVEYSDDEARSCRNAYYSIMNTFDALRSSDAFHQVASFVARFSRLVDTSFNGADLDGDGQQASKRARVDVPTYGKQRGTLELFQKMILMHATYFIAAVILGDHADRIGAFLKMVFNTPEFSDATIRHFRQRATVFLVPRRHGKTWFLVPLIALALATFKGIKIGYTAHIRKATEPVFDEIGARLRQWFGNSPVDHVKGENISFSFPDGSKSTIVFASSHNTNGIR
type: DOMAIN
name: DNA_pack_N
description: Probable DNA packing protein, N-terminal