nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MLDNSRARSIVHLLILLKAHVITQIIKNTQEFTSLCTFVKVTLKATDGLTSAASKSQTDWALGENPTSRIKKLITELETSSDRIRLGEEPNLTIQLPQGDPKQRLRRKLEVFLARAKYTEELVRQAQGDVGGRCNEAKAELEEAVTGRKGPDLETQATAAAAALHNKARGTACKVAGATTDTNFAGTSLVADLMCLCAAETNSREKHICGFESHASGVWANAGTNSNAGEIWGKILDACKNREIQVEVTPQFLRIAITKFEGLLGAQAHKLTSNGNAGAWLLGYSMNAGSVTCDGQSSTNGICVDYKGSSDARGPIAWLGHIKNAITALENRDKNLQRVRKLQRQAEAILMSAEDALIEANISLGGKDMVPASEVTVPNSSNPTSRQNSVVQEPTTVSAAAITPLILPWTLLI

Annotated regions:
phrase: KQRLRRKLEVFLARAKYTEELVRQAQGDVGGRCNEAKAELEEAVTGRKGPDLETQATAAAAALHNKARGTACKVAGATTDTNFAGTSLVADLMCLCAAETNSREKHICGFESHASGVWANAGTNSNAGEIWGKILDACKNREIQVEVTPQFLRIAITKFEGLLGAQAHKLTSNGNAGAWLLGYSMNAGSVTCDGQSSTNGICVDYKGSSDARGPIAWLGHIKNAITALENRDKNLQRVRKLQRQ
type: DOMAIN
name: Trypano_VSG_B_N_dom
description: Trypanosome variant surface glycoprotein, B-type, N-terminal domain
Protein sequence:
MRVRGIPRNWPQWWTWGILGFWMIIMCRVVGNLWVTVYYGVPVWREAKTTLFCASEAKAYEREVHNVWATHACVPADPNPQEMVLENVTENFNMWKNDMVDQMHEDVISLWDQSLKPCVKLTPLCVTLKCTDATVNGTRNSTGTYHNTDGVKNCSFNITTEIRDKKQKVYALFYRPDVVPLGKNSSDYILINCNTSIITQTCPKVSFDPIPIHYCAPAGYAILKCNDKEFNGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEGEIIIRTESLTSNVKTIIVHLNESVEIVCTRPGNNTRKSIRIGPGQTFYANEVIGDIRKAHCSINKTLWGTTLNGVRKKLEELYNNTAKFEPPSGGDLEVTTHSFNCRGEFFYCDTTQLFNQTLFNGSDSNKTNIVLPYIVLPCRIKQIINMWQKVGRAIYNPPIAGNLTCNSSITGLLLTRDGGENMTQGAETFRPTGGNMKDNWRSELYKYKVVEIQPLGVAPTEAKRRVMQRERRAVVGMGAVLLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARVLAIERYLKDQQLLGLWGCSGKLICTTTVPWNSSWSNKSKTDIWDNMTWMQWDREISNYTGIIYSLLEESQNQQEKNEQDLLALDSWKNLWSWFDISNWLWYIKIFIMIVGGLIGLRIVLGVLSIVKRVRQGYSPLSFQTLIPNQRGPDRLGRIEGEGGEQDKGRSVRLVNGFLALVWEDLRSLCLFSYHQLRDFIL

Annotated regions:
phrase: MGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARVLAIERYLKDQQLLGLWGCSGKLICTTTVPWNSSWSNKSKTDIWDNMTWMQWDREISNYTGIIYSLLEESQNQQEKNEQDLLALDSWKNLWSWFDISNWLWYIKIFIMIVGGLIGLRIVLGVLSIVKRVRQGYSPLSFQT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: VQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARVLAIERYLKDQQLLGLWGCSGKLICTTTVPWNSSWSNKSKTDIWDNMTWMQWDREISNYTGIIYSLLEESQNQQEKNEQDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWREAKTTLFCASEAKAYEREVHNVWATHACVPADPNPQEMVLENVTENFNMWKNDMVDQMHEDVISLWDQSLKPCVKLTPLCVTLKCTDATVNGTRN
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: TRNSTGTYHNTDGVKNCSFNITTEIRDKKQKVYALFYRPDVVPLGKNSSDYILINCNTSIITQTCPKVSFDPIPIHYCAPAGYAILKCNDKEFNGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEGEIIIRTESLTSNVKTIIVHLNESVEIVCTRPGNNTRKSIRIGPGQTFYANEVIGDIRKAHCSINKTLWGTTLNGVRKKLEELYNNTAKFEPPSGGDLEVTTHSFNCRGEFFYCDTTQLFNQTLFNGSDSNKTNIVLPYIVLPCRIKQIINMWQKVGRAIYNPPIAGNLTCNSSITGLLLTRDGGENMTQGAETFRPTGGNMKDNWRSELYKYKVVEIQPLGVAPTEAKRRVMQRER
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MSDSEEDLGVQLKGLKIARHLKESGEHTDEESNSSPEHDCGLSNQDDLTVMHTQAKEEVFKRREEDGTRTEDALHEGEAGKEGTGFPSSQSVCSPNEADSGIDRADKPILLDPFKSVHDTDPVPGTKSRSNSDSDSDSDDGGWQEMPAVSSFNIYNHRGELELTSKVRNSEQASETSPTVPPGKNCKSVNDSRFDYTKMAAEQQAQRSYRTNKKTDFLFDHKVLKKKINSSQTSVNLTSSPSTTSLNNEKNNDDDDDDSYDEYEDDVEPVNDLNRDSQLNITKNLLSDMEKFAYVGAINILANQMCTNLATLCLCIDIKSHKKLAHRLQFTQKDMAAWKTVVLSRLYDHLGISQEEIVMIEKLSLHKIQLEDLCKCLKTTQSIDNPWENDRDHEEDGIEETTERMSPNEQNGSVQASTPDPEQSATPETPKAKQSPLSSDVPGKVLDPENVKSQDKLNIDVAWTIICDLFLICLQSSTYDSRSRTLLINFAKVLNMTSLEICEFERRVTDSLDMEQSTEDQVWDEQDHMRNRRRSKRRKKMAYVALAMVGGSLVLGLSGGLLAPVIGGGIAAGLSTIGITGATSFLTGVGGTTVVAVSSTAIGANIGARGMSKRMGSVRTFEFRPLHNNRRVNLILTVSGWMVGNEDDVRLPFSTVDPVEGDLYSLYWEPEMLKSIGQTVSIVATEIFTTSLQQILGATVLTALISSIQWPMALSKLGYILDNPWNVSLDRAWSAGKILADTLIARNLGARPITLVGFSIGARVIFSC

Annotated regions:
Protein sequence:
MALGNEINITNKLKRQEIFADIKHEKNKERHTMRRKRAKEERENPELREQRLKENVTQTIENTRVYDETINKEVEGDEDDLMRYFNSNSNEPPKIFLTTNVNAKKSAYEFANILIEILPNVTFVKRKFGYKLKEISDICIKRNFTDIVIINEDKKKVTGLTFIHLPEGPTFYFKLSSFVEVKKIVGHGRPTSHIPELILNNFQTRLGQTVGRLFQSILPQNPDIEGRQVITLHNQRDYIFFRRHRYVFKDNERVGLQELGPQFTLKLKRLQRGIKEETEWEHKPEMDKEKKKFYL

Annotated regions:
phrase: YEFANILIEILPNVTFVKRKFGYKLKEISDICIKRNFTDIVIINEDKKKVTGLTFIHLPEGPTFYFKLSSFVEVKKIVGHGRPTSHIPELILNNFQTRLGQTVGRLFQSILPQNPDIEGRQVITLHNQRDYIFFRRHRYVFKDNERVGLQELGPQFTLKLK
type: DOMAIN
name: Brix
description: Brix domain

phrase: FLTTNVNAKKSAYEFANILIEILPNVTFVKRKFGYKLKEISDICIKRNFTDIVIINEDKKKVTGLTFIHLPEGPTFYFKLSSFVEVKKIVGHGRPTSHIPELILNNFQTRLGQTVGRLFQSILPQNPDIEGRQVITLHNQRDYIFFRRHRYVFKDNERVGLQELGPQFTLKLKR
type: DOMAIN
name: Brix
description: Brix domain

phrase: PKIFLTTNVNAKKSAYEFANILIEILPNVTFVKRKFGYKLKEISDICIKRNFTDIVIINEDKKKVTGLTFIHLPEGPTFYFKLSSFVEVKKIVGHGRPTSHIPELILNNFQTRLGQTVGRLFQSILPQNPDIEGRQVITLHNQRDYIFFRRHRYVFKDNERVGLQELGPQFTLKLKRLQRGIK
type: DOMAIN
name: Brix
description: Brix domain
Protein sequence:
MVRECVEESFGPKKMTKKSIVDSCKKNKLYITPHLNDILYLNYSGYNAIESLEEYVGLKCLWLECNAISEIKGLEYQTELKCLYLQNNLITKIENLDSCKQLDTLNLSHNHITRIENCGHDILPVLNTLNLSHNYLKTADNLDHLRHCNFVSVLDLSHNRIEDIAIVKILGGMKELRVLTMTGNPVVNEIPSYRKTLILECKNLTYLDTRPVFDRDRACAEAWKRGGYEEERKELLRWKKEEQRKIRRSINATLRMRHRGDGEPELLKTSSDEEDEDKASKCGKDMSSMLEINQKTNEQAWAEVEKMFCTTPSATGSSGIFQRFATNRGGGADGDGEVIETSEEDIEATIEDIKAVSPKKLIEEISSDSDGAKENYDCKPDEVIAKPCSEKLIEEIVIETAECDSGPSSPEYHEALDKPIENIVNLTNESPLTSPSFDTEPRTLIEEIEPTDVEEEQQIEEQPAPKPLSKNMEKVMSTEKEDDTLNVLIENNEEISITMESKDGELISKVESRPPSTECKKYKIVSTNDVDNSESEPTDITNEDQEYRSSSVSVTSSTDSSDSEDLFDKIVPNKHPKLATNYRQDSTTSTDSENEVSPSKPPIKLEKEKSIAECIDEYKKFFKAAKILESDPEDESSTKMARPHTAKAKRTEPIIYEGVLRNMERNSNESKIAEARTEAKESKEKVIDRLIEQQNLVDMNLEEQNISIGGQEHDFNEYRLEAFRKDQEKLQCLIDRVTAQKDLYNAHIDQIHNQLANIMEDYDQIGLKLKKVDDFLENIKEEPKAPETPSIESEEEIPEELEVHSSEHEQEIVENDNLAQQIIEKIISQSVKTSSEDLKSNFDDSSESSDSAEEDFMDSIRPDHNLLEILTSPKPIPILDPELIPNVDNEFQRDPVYRKFIEIQEEIDKLTEDELYDIVTEATGEFSEEAHVEHCLNTQVDQYWKQYDDIEEFRKNINLDSHPIIQKFRQFIRCHCENKYPGEVDSTIDNLDKACRKLERRLSNQLFDEYLELSRKMSVATIGGESSANEIELIEVDEEENDVEDVVKKITAWVEEQVQNEIAELNEERAAHAGEVMQDTEDVESKPVEIDGTKEETVDSELADNCD

Annotated regions:
phrase: QLDTLNLSHNHITRIENCGHD
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: ELKCLYLQNNLITKIENLDSC
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: GLKCLWLECNAISEIKGLEYQ
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: VLNTLNLSHNYLKTADNLDHL
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat
Protein sequence:
MAKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNARTESLEKGLPIPVVITVYADRSFTFVTKTPPAAVLLKKAAGIKSGSSKPNKDKVGKVTLDQIRQIAETKAADMTGATIETKMKSIEGTARSMGLVVEG

Annotated regions:
phrase: VKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNARTESLEKGLPIPVVITVYADRS
type: DOMAIN
name: Ribosomal_uL11_N
description: Large ribosomal subunit protein uL11, N-terminal

phrase: KSIEGTARSMGLVVE
type: CONSERVED_SITE
name: Ribosomal_uL11_CS
description: Large ribosomal subunit protein uL11, conserved site

phrase: KTPPAAVLLKKAAGIKSGSSKPNKDKVGKVTLDQIRQIAETKAADMTGATIETKMKSIEGTARSMGLV
type: DOMAIN
name: Ribosomal_uL11_C
description: Large ribosomal subunit protein uL11, C-terminal
Protein sequence:
MANDYLFTSESVSEGHPDKVADQISDAILDAILEQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQIARDTIKRIGYDNTDYGIDYKGCAVLVAYDKQSPDIAQGVDRAHDDNLDQGAGDQGLMFGYACDETPELMPLPIYLSHRLVERQASLRRDGRLQWLRPDAKSQVTVRYVDGKPHSIDTVVLSTQHAPDIELPALREAVIEEIIKPTLPADLIKGDIKFLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDAVITKLVREHFDLRPKGIIKMLDLLRPIYEKTAAYGHFGREEPEFSWEATDKALALAEAAGVEPTARVA

Annotated regions:
phrase: GGGAFSGK
type: CONSERVED_SITE
name: ADOMET_SYNTHASE_CS
description: S-adenosylmethionine synthetase, conserved site

phrase: GAGDQGLMFG
type: CONSERVED_SITE
name: ADOMET_SYNTHASE_CS
description: S-adenosylmethionine synthetase, conserved site

phrase: YLFTSESVSEGHPDKVADQISDAILDAILEQDKYSRVAAETLCNTGLVVLAGEITTTANIDYIQIARDTIKRIGYDNTDYGIDYKGCAVLVAYDKQS
type: DOMAIN
name: S-AdoMet_synt_N
description: S-adenosylmethionine synthetase, N-terminal

phrase: IGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDAVITKLVREHFDLRPKGIIKMLDLLRPIYEKTAAYGHFGREEPEFSW
type: DOMAIN
name: S-AdoMet_synt_C
description: S-adenosylmethionine synthetase, C-terminal

phrase: DQGAGDQGLMFGYACDETPELMPLPIYLSHRLVERQASLRRDGRLQWLRPDAKSQVTVRYVDGKPHSIDTVVLSTQHAPDIELPALREAVIEEIIKPTLPADLIKGDIKFLVNPTGR
type: DOMAIN
name: S-AdoMet_synt_central
description: S-adenosylmethionine synthetase, central domain
Protein sequence:
MDLLRFITCGSVDDGKSTLIGRLLHDSAQLMDDQIAALESDSRRMGTQGQAIDFALLVDGLAAEREQGITIDVAYRFFSSATRRFIVADCPGHEQYTRNMATGASTADAAVLLVDARKGVLTQTRRHAAICRLMGVRHLILAVNKMDLVGFDAERFEAIAAEGEALGAALAIPLSGLTGANVFSRSAEMPWFAGPTLMEALDAVPAQTAEGDAPLRLPVQWVNRPHQDFRGYAGLIAAGSVVRGQDVRVLPSGRTSRVASVLVGEREVERAEAGQSVTLTLTDEVDCSRGSVIVALHQAPEVSDQFEASLVWLAEEELLPGRGYWLHCASQSVTATVQPPKYELGIDTGEHLAARTLGLNAIGVVEFATDRPLVFEPYATSRALGGFILVDKVTNATVACGMIHFALRRASNIHWQAIEVSRDAHARQKAQKPCVIWLTGLSGAGKSTIANRVEQKLHALGRHSFLLDGDNVRHGLSRDLGFTEADRIENIRRVGEVARLMADAGLIVITAFISPFRAEREMVRRMLPEGEFLEVFVDAPLAEAERRDVKGLYAKARAGKLSNFTGIDSPYEAPERPDLHIDTTVTSADEAAERIVDRLLR

Annotated regions:
phrase: EVSDQFEASLVWLAEEELLPGRGYWLHCASQSVTATVQPPKYELGIDTGEHLAARTLGLNAIGVVEFATDRPLVFEPYATSRALGGFILVDKVTNATVACGM
type: DOMAIN
name: CysN_NoDQ_III
description: Sulfate adenylyltransferase subunit CysN, Domain III

phrase: MDLLRFITCGSVDDGKSTLIGRLLHDSAQLMDDQIAALESDSRRMGTQGQAIDFALLVDGLAAEREQGITIDVAYRFFSSATRRFIVADCPGHEQYTRNMATGASTADAAVLLVDARKGVLTQTRRHAAICRLMGVRHLILAVNKMDLVGFDAERFEAIAAEGEALGAALAIPLSGLTGANVFSRSAEMPWFAGPTLMEALDAVPAQTA
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: DGLAAEREQGITIDV
type: CONSERVED_SITE
name: G_TR_CS
description: Tr-type G domain, conserved site

phrase: RFITCGSVDDGKS
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: EQGITIDV
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: IVADCPGHEQ
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: TGASTADAAVL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: LILAVNKMD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: LRLPVQWVNRPHQDFRGYAGLIAAGSVVRGQDVRVLPSGRTSRVASVLVGEREVERAEAGQSVTLTLTDEVDCSRGSVIV
type: DOMAIN
name: CysN_II
description: Sulfate adenylyltransferase subunit CysN, Domain II

phrase: RFITCGSVDDGKSTLIGRLLHDSAQLMDDQIAALESDSRRMGTQGQAIDFALLVDGLAAEREQGITIDVAYRFFSSATRRFIVADCPGHEQYTRNMATGASTADAAVLLVDARKGVLTQTRRHAAICRLMGVRHLILAVNKMDLVGFDAERFEAIAAEGEALGAALAIPLSGLTGANVFSRSAEMPWFAGPTLMEALDAVPA
type: DOMAIN
name: CysN_GTP-bd
description: Sulfate adenylyltransferase subunit CysN, GTP-binding domain

phrase: LLRFITCGSVDDGKSTLIGRLLHDSAQLMDDQIAALESDSRRMGTQGQAIDFALLVDGLAAEREQGITIDVAYRFFSSATRRFIVADCPGHEQYTRNMATGASTADAAVLLVDARKGVLTQTRRHAAICRLMGVRHLILAVNKMDLVGFDAERFEAIAAEGEALGAALAIPLSGLTGANVFSRSAEMPWFAGPTLMEAL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: QFEASLVWLAEEELLPGRGYWLHCASQSVTATVQPPKYELGIDTGEHLAARTLGLNAIGVVEFATDRPLVFEPYATSRALGGFILVDKVTNATVACGMI
type: DOMAIN
name: GTP-eEF1A_C
description: GTP-eEF1A, C-terminal domain
Protein sequence:
MFDAKNFLANVTHQPGVYRMFDEKGQVIYVGKAKDLKKRLSSYFRTNLNSKKTSALVSHIHSIETTITASETEALLLEHNYIKAFQPRYNVLLRDDKSYPYILLTKERHPRITSHRGSKKVQGEYFGPYPHAGAVRETLSLLQKLFPIRQCENSVYNNRSRPCLQYQIGRCSGPCIDGLVSDEEYQQQVDFARLFLQGKDQQVLEHLIKKMEQASMQLNFEQAAYFRDQIQAIRAVIEKQFVSNERLDDMDILAIAYQLGIACVQVLFIRQGKVLGNRSYFPKVPANTDLSELTETFVGQFYLQGHQGRIIPSTIIVDHVLNEKHELEVLLTEQAGRKVNIQDNVKGNKSKFLHLAQMNAQAALVTQLKQANLIQERYQALQELLSLTTIKRMECFDISHTMGEQTIASCVVFDTEGPLKSDYRRFNISGITAGDDYAAMEQALLKRYDRPLENEKIPDIIFIDGGKGQLNRALQVFAQLNVSWDKNKPLLIGVAKGVDRKAGLETLIISKQNKEVNLLPDSLALHLIQHIRDESHYHAIGGHRKKRQQAFTQSGLEAIKGVGAKRRQALLKYLGGMQGVKNATLAEISSVPGISAALAERIYETLRSE

Annotated regions:
phrase: QPGVYRMFDEKGQVIYVGKAKDLKKRLSSYFRTNLNSKKTSALVSHIHSIETTITASETEALLLEHNYIKAFQPRYNVLLR
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: HQPGVYRMFDEKGQVIYVGKAKDLKKRLSSYFRTNLNSKKTSALVSHIHSIETTITASETEALLLEHNYIKAFQPRYN
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: QQVLEHLIKKMEQASMQLNFEQAAYFRDQIQAIRA
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: QVLEHLIKKMEQASMQLNFEQAAYFRDQIQAIR
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: AEISSVPGISAALAERIYE
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: SGLEAIKGVGAKRRQALLK
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: ILAIAYQLGIACVQVLFIRQGKVLGNRSYFPKVPANTDLSELTETFVGQFYLQGHQGRIIPSTIIVDHVLNEKHELEVLLTEQAGRKVNIQDNVKGNKSKFLHLAQMNAQAALVTQLKQANLIQERYQALQELLSLTTIKRMECFDISHTMGEQTIASCVVFDTEGPLKSDYRRFNISGITAGDDYAAMEQALLKRYDRPLENEKIPDIIFIDGGKGQLNRALQV
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: QELLSLTTIKRMECFDISHTMGEQTIASCVVFDTEGPLKSDYRRFNISGITAGDDYAAMEQALLKRYDRPLENEKIPDIIFIDGGKGQLNRALQVFAQLNVSWDKNKPLLIGVAKGVDRKAGLETLIISKQNKEVNLLPDSLALHLIQHIRDESHYHA
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: PGVYRMFDEKGQVIYVGKAKDLKKRLSSYFRTNLNSKKTSALVSHIHSIETTITASETEALLLEHNYIKAFQPRY
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: HQPGVYRMFDEKGQVIYVGKAKDLKKRLSSYFRTNLNSKKTSALVSHIHSIETTITASETEALLLEHNYIKAFQPRYN
type: DOMAIN
name: GIY-YIG_UvrC_Cho
description: UvrC/Cho-like, GIY-YIG domain
Protein sequence:
MKQQAFDVIVIGGGHAGTEAAAAAARLGVQVALITLERSGIGVMSCNPAIGGLGKGHLVREIDAMDGVMGRVADKAGIQFRLLNRRKGPAVQGPRSQSDRDVYRSEMLAEMESLPNLRILEGEVADLITSGTRIEGVCLADGSEVTARAVVVTTGTFLRGIIHIGNRSFQGGRMGAAPSVRLAERFDSFGLPLGRLKTGTPPRLDKRSIAWDKLEPQPGDEDPTLFSFLSAGPHLRQVHCAVTHTNERTHEIIRKNLSRSAMYGGSIEGVGPRYCPSIEDKVVRFSDKTSHQIFLEPEGLDSTTIYPNGISTSLPEDVQEAYVRSISGLENAKITQPGYAIEYDYVDPRALDAALRVKGFDGLYLAGQINGTTGYEEAAAQGLVAGLNAALEGKGKFLPSRMTSYIGVMIDDLITQGVAEPYRMFTSRAEYRLSLRCDNADQRLTPEGLVLGCVGKERRIKFEKKMGLLDETLKKLKSFEVTPKQANEAGIRVNEDGRRRSGLDLLSLSNVSYESLAATWPELQASTEIAKQAKIEATYANYIERQQRDVMALKKDEEIEFPPRFDFSGLSGLSNELKSKLTAVRPSTLGQAARIEGMTPAALTLLLASLRKAEKRRSA

Annotated regions:
phrase: ATYANYIERQQRDVMALKKDEEIEFPPRFDFSGLSGLSNELKSKLTAVRPSTLGQAARIEGMTPAALTLLL
type: DOMAIN
name: MnmG_C_subdom
description: tRNA uridine 5-carboxymethylaminomethyl modification enzyme, C-terminal subdomain

phrase: DVIVIGGGHAGTEAAAAAARLGVQVALITLERSGIGVMSCNPAIGGLGKGHLVREIDAMDGVMGRVADKAGIQFRLLNRRKGPAVQGPRSQSDRDVYRSEMLAEMESLPNLRILEGEVADLITSGTRIEGVCLADGSEVTARAVVVTTGTFLRGIIHIGNRSFQGGRMGAAPSVRLAERFDSFGLPLGRLKTGTPPRLDKRSIAWDKLEPQPGDEDPTLFSFLSAGPHLRQVHCAVTHTNERTHEIIRKNLSRSAMYGGSIEGVGPRYCPSIEDKVVRFSDKTSHQIFLEPEGLDSTTIYPNGISTSLPEDVQEAYVRSISGLENAKITQPGYAIEYDYVDPRALDAALRVKGFDGLYLAGQINGTTGYEEAAAQGLVAGLNAALEGK
type: DOMAIN
name: MnmG_N
description: MnmG, N-terminal domain

phrase: GPRYCPSIEDKVVR
type: CONSERVED_SITE
name: MnmG-rel_CS
description: MnmG-related, conserved site

phrase: AGQINGTTGYEEAAAQGLVAGLN
type: CONSERVED_SITE
name: MnmG-rel_CS
description: MnmG-related, conserved site

phrase: ALKKDEEIEFPPRFDFSGLSGLSNELKSKLTAVRPSTLGQAARIEGMTPAALTLL
type: DOMAIN
name: MnmG_C
description: tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG, C-terminal

phrase: KERRIKFEKKMGLLDETLKKLKSFEVTPKQANEAGIRVNEDGRRRSGLDLLSLSNVSYESLAATWPELQASTEIAKQAKIEATYANYIERQ
type: DOMAIN
name: GIDA_C_N
description: tRNA uridine 5-carboxymethylaminomethyl modification enzyme, C-terminal, N-terninal subdomain
Protein sequence:
MNINEVINYAKGXNLDTIEALLILELILKTKKELIIANIKKSLTKKEKKLFFDQIDKIEKGIPIHYILQKKEFMGIEFSLNKHVLIPRFDTECLAEEALIQIQQNGFKKILDLCCGSGCIGLSIAYYIRKKVILSDISTKALQIVEKNTKKLKLEKFVEIIHSNLLKCIKGKLDIIITNPPYLNKEELEIKNKIKKEPTKALLGFGKDGLNISRKILNQAKEKLSPNGLIIIESAPWQIKSLKDFAIKKGFSHLKTIYDLEKRARALILGQRDDTSIRNCTFNQDK

Annotated regions:
phrase: IITNPP
type: CONSERVED_SITE
name: DNA_methylase_N6_adenine_CS
description: DNA methylase, N-6 adenine-specific, conserved site

phrase: GXNLDTIEALLILELILKTKKELIIANIKKSLTKKEKKLFFDQIDKIEKGIPIHYI
type: DOMAIN
name: PrmC_N
description: Release factor glutamine methyltransferase, N-terminal domain

phrase: QIQQNGFKKILDLCCGSGCIGLSIAYYIRKKVILSDISTKALQIVEKNTKKLKLEKFVEIIHSNLLKCIKGKLDIIITNPPYLNKEELEIKNKIK
type: DOMAIN
name: Small_mtfrase_dom
description: Methyltransferase small domain
Protein sequence:
MLSDTIDTKQQQQQLHVLFIDSYDSFTYNVVRLIEQQTDISPGVNAVHVTTVHSDTFQSMDQLLPLLPLFDAIVVGPGPGNPNNGAQDMGIISELFENANGKLDEVPILGICLGFQAMCLAQGADVSELNTIKHGQVYEMHLNDAARACGLFSGYPDTFKSTRYHSLHVNAEGIDTLLPLCTTEDENGILLMSAQTKNKPWFGVQYHPESCCSELGGLLVSNFLKLSFINNVKTGRWEKKKLNGEFSDILSRLDRTIDRDPIYKVKEKYPKGEDTTYVKQFEVSEDPKLTFEICNIIREEKFVMSSSVISENTGEWSIIALPNSASQVFTHYGAMKKTTVHYWQDSEISYTLLKKCLDGQDSDLPGSLEVIHEDKSQFWITLGKFMENKIIDNHREIPFIGGLVGILGYEIGQYIACGRCNDDENSLVPDAKLVFINNSIVINHKQGKLYCISLDNTFPVALEQSLRDSFVRKKNIKQSLSWPKYLPEEIDFIITMPDKLDYAKAFKKCQDYMHKGDSYEMCLTTQTKVVPSAVIEPWRIFQTLVQRNPAPFSSFFEFKDIIPRQDETPPVLCFLSTSPERFLKWDADTCELRPIKGTVKKGPQMNLAKATRILKTPKEFGENLMILDLIRNDLYELVPDVRVEEFMSVQEYATVYQLVSVVKAHGLTSASKKTRYSGIDVLKHSLPPGSMTGAPKKITVQLLQDKIESKLNKHVNGGARGVYSGVTGYWSVNSNGDWSVNIRCMYSYNGGTSWQLGAGGAITVLSTLDGELEEMYNKLESNLQIFM

Annotated regions:
phrase: VLFIDSYDSFTYNVVRLIEQQTDISPGVNAVHVTTVHSDTFQSMDQLLPLLPLFDAIVVGPGPGNPNNGAQDMGIISELFENANGKLDEVPILGICLGFQAMCLAQGADVSELNTIKHGQVYEMHLNDAARACGLFSGYPDTFKSTRYHSLHVNAEGIDTLLPLCTTEDENGILLMSAQTKNKPWFGVQYHPESCCSELGGLLVSNF
type: DOMAIN
name: TrpG/PapA_dom
description: Anthranilate synthase/para-aminobenzoate synthase like domain

phrase: FIDSYDSFTYNVVRLIEQQTDISPGVNAVHVTTVHSDTFQSMDQLLPLLPLFDAIVVGPGPGNPNNGAQDMGIISELFENANGKLDEVPILGICLGFQAMCLAQGADVSELNTIKHGQVYEMHLNDAARACGLFSGYPDTFKSTRYHSLHVNAEGIDTLLPLCTTEDENGILLMSAQTKNKPWFGVQYHPESCCSELGGLLVSNF
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: HVLFIDSYDSFTYNVVRLIEQQTDISPGVNAVHVTTVHSDTFQSMDQLLPLLPLFDAIVVGPGPGNPNNGAQDMGIISELFENANGKLDEVPILGICLGFQAMCLAQGADVSELNTIKHGQVYEMHLNDAARACGLFSGYPDTFKSTRYHSLHVNAEGIDTLLPLCTTEDENGILLMSAQTKNKPWFGVQYHPESCCSELGGLLVSNFL
type: DOMAIN
name: TrpG/PapA_dom
description: Anthranilate synthase/para-aminobenzoate synthase like domain

phrase: REEKFVMSSSVISENTGEWSIIALPNSASQVFTHYGAMKKTTVHYWQDSEISYTLLKKCLDGQDSDLPGSLEVIHEDKSQFWITLGKFMENKIIDNHREIPFIGGLVGILGYEIGQYIACGRCNDDENSLVPDAKLVFINNSIVINHKQGKL
type: DOMAIN
name: Anth_synth_I_N
description: Anthranilate synthase component I, N-terminal

phrase: KLDYAKAFKKCQDYMHKGDSYEMCLTTQTKVVPSAVIEPWRIFQTLVQRNPAPFSSFFEFKDIIPRQDETPPVLCFLSTSPERFLKWDADTCELRPIKGTVKKGPQMNLAKATRILKTPKEFGENLMILDLIRNDLYELVPDVRVEEFMSVQEYATVYQLVSVVKAHGLTSASKKTRYSGIDVLKHSLPPGSMTGAPKKITVQLLQDKIESKLNKHVNGGARGVYSGVTGYWSVNSNGDWSVNIRCMYSYNGGTSWQLGAGGAITVLSTLDGELEEMYN
type: DOMAIN
name: Chorismate_C
description: Chorismate-utilising enzyme, C-terminal
Protein sequence:
MDSRPIGVFDSGVGGLTVLKRLIQVLPEEDYIYFGDTKRVPYGDRSKEEIELFAGQIINFMKEKNVKAVVIACNTTCATIDKGKYDIELFDVLKAGAESGVYCTKNKKVGVIATKRTVESRSYEINIKSINPQIEVYQKACPEFVPLIEKGLYNSHLAYKAAKDCLEEFKGKEIDTLILGCTHYPLMEPIIKAIMGDGVKVVDPAVRLSHEVKEYLERSRILNFGKKGKIEFFVSGDAENFKRAAEMVLGKKIDEVFIVDIERY

Annotated regions:
phrase: LILGCTHYPL
type: ACTIVE_SITE
name: Asp/Glu_racemase_AS_2
description: Asp/Glu racemase, active site 2
Protein sequence:
MVMRNPSALLLEQFPWQETLQWQPTPQQQEQFQRFYGALLAANQGMNLTRITAVPDFWEKHLWDSLRGILPWLQPTGETLWGAKIQQVIDIGSGGGFPGVPVAIARPDWSVTLLEATQKKVKFLHSLGSAVGLANIYPEWGRAESHGRRYDLALIRAVGDVARCCAYGLPLLRSGGILVLYRGQWSDEDTQHLETLLPRYRSRRLDIQGFTTPLSHAQRHCVYLQRQG

Annotated regions:
Protein sequence:
MPSMPEEPILTPTPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLTNDERHFIKHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSEMYSLLLDTYIKDNKERDHLFRAIETIPCDEKSRMGYEMDQRISKLR

Annotated regions:
phrase: IENIHSEMYSLLLDTY
type: ACTIVE_SITE
name: RNR_small_AS
description: Ribonucleotide reductase small subunit, acitve site
Protein sequence:
MSTPARKRLMRDFKRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREVVEQSWTAD

Annotated regions:
phrase: PARKRLMRDFKRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVREVVEQSW
type: DOMAIN
name: UBQ-conjugat_E2_core
description: Ubiquitin-conjugating enzyme E2, catalytic core domain

phrase: FHPNIYADGSICLDI
type: ACTIVE_SITE
name: UBQ-conjugating_AS
description: Ubiquitin-conjugating enzyme, active site

phrase: RLMRDFKRLQHDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRRVRE
type: DOMAIN
name: UBQ-conjugat_E2_core
description: Ubiquitin-conjugating enzyme E2, catalytic core domain
Protein sequence:
MTKRYWNIILEEMMEAGVHFGHGTRKWNPKMSPYISAKRKGIHITNLIRTARFLSEACDLVFDAASEGKQFLIVGTKKKAADSVARAAIRARCHYVNKKWLGGMLTNWYTTETRLQKFRDLRMQQKTGRLNSFPKRDAAILKRHLAHLETYLGGIKYMTGLPDIVIIVDQQEEYTALRECITLEIPTICLIDTNCDPDLADISIPANDDAIASIRLILNKLVFAICEGRSSYIRNS

Annotated regions:
phrase: LEEMMEAGVHF
type: CONSERVED_SITE
name: Ribosomal_uS2_CS
description: Small ribosomal subunit protein uS2, conserved site
Protein sequence:
MPLLLSGQKFRTDLESFGCLAILSPLEGGAETRLLRRLRASGYQTQITSARGLGDPVVFLTQLHGIRPPHLGHQNVGRNGALGEVQQVIPQLNELLVEDKPLVLWLLEGQVLSKSELLAISNLCQKEPRIKIVIEMGGARSIKWQPLNEFINKD

Annotated regions:
Protein sequence:
MVNEQIIDISGPLKGEIEVPGDKSMTHRAIMLASLAEGVSTIYKPLLGEDCRRTMDIFRLLGVEIKEDDEKLVVTSPGYQSFNTPHQVLYTGNSGTTTRLLAGLLSGLGIESVLSGDVSIGKRPMDRVLRPLKLMDANIEGIEDNYTPLIIKPSVIKGINYQMEVASAQVKSAILFASLFSKEPTIIKELDVSRNHTETMFKHFNIPIEAEGLSINTTPEAIRYIKPADFHVPGDISSAAFFIVAALITPGSDVTIHNVGINPTRSGIIDIVEKMGGNIQLFNQTTGAEPTASIRIQYTPMLQPITIEGELVPKAIDELPVIALLCTQAVGTSTIKDAEELKVKETNRIDTTADMLNLLGFELQPTNDGLIIHPSEFKTNATVDSLTDHRIGMMLAVASLLSSEPVKIKQFDAVNVSFPGFLPKLKLLENEG

Annotated regions:
phrase: LYTGNSGTTTRLLA
type: CONSERVED_SITE
name: EPSP_synthase_CS
description: 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site

phrase: DISGPLKGEIEVPGDKSMTHRAIMLASLAEGVSTIYKPLLGEDCRRTMDIFRLLGVEIKEDDEKLVVTSPGYQSFNTPHQVLYTGNSGTTTRLLAGLLSGLGIESVLSGDVSIGKRPMDRVLRPLKLMDANIEGIEDNYTPLIIKPSVIKGINYQMEVASAQVKSAILFASLFSKEPTIIKELDVSRNHTETMFKHFNIPIEAEGLSINTTPEAIRYIKPADFHVPGDISSAAFFIVAALITPGSDVTIHNVGINPTRSGIIDIVEKMGGNIQLFNQTTGAEPTASIRIQYTPMLQPITIEGELVPKAIDELPVIALLCTQAVGTSTIKDAEELKVKETNRIDTTADMLNLLGFELQPTNDGLIIHPSEFKTNATVDSLTDHRIGMMLAVASLLSSEPVKIKQFDAVNVSFPGFLPK
type: DOMAIN
name: Enolpyruvate_Tfrase_dom
description: Enolpyruvate transferase domain

phrase: KVKETNRIDTTADMLNLL
type: CONSERVED_SITE
name: EPSP_synthase_CS
description: 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site