nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MKVGIIMGGISSEREVSLNSGKSIINYMDKNKYEIVPIVIDKKNDVFEKVKDIDFAFIALHGKFGEDGIIQSVFQTMDIPYSGCSPLTSGICMDKDISKKLLYSANINTAEWICIKSIENIDYDYLEKMGYPVVVKPNSGGSSVATTIIEKSEDIEEAARLAFNYDEEVMIEKYIEGDEITCCILDGTALPILAIKPNKGSFFDYTSKYADGGSEEIVVEFEKPLQSKIEEISLKCWELFKCKGYVRVDMILKDKVPYVLELNTLPGLTKNSLFPKSANGVNISFTELLDKIIQCSM

Annotated regions:
phrase: FKCKGYVRVDMILKDKVPYVLELNTLP
type: CONSERVED_SITE
name: D-Ala_lig_Van_CS
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site

phrase: HGKFGEDGIIQ
type: CONSERVED_SITE
name: D-Ala_lig_Van_CS
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site

phrase: KKLLYSANINTAEWICIKSIENIDYDYLEKMGYPVVVKPNSGGSSVATTIIEKSEDIEEAARLAFNYDEEVMIEKYIEGDEITCCILDGTALPILAIKPNKGSFFDYTSKYADGGSEEIVVEFEKPLQSKIEEISLKCWELFKCKGYVRVDMILKDKVPYVLELNTLPGLTKNSLFPKSANGVNISFTELLDKII
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold

phrase: EKVKDIDFAFIALHGKFGEDGIIQSVFQTMDIPYSG
type: DOMAIN
name: Dala_Dala_lig_N
description: D-alanine--D-alanine ligase, N-terminal domain

phrase: KVGIIMGGISSEREVSLNSGKSIINYMDKNKYEIVPIVIDKKNDV
type: DOMAIN
name: Dala_Dala_lig_N
description: D-alanine--D-alanine ligase, N-terminal domain

phrase: LYSANINTAEWICIKSIENIDYDYLEKMGYPVVVKPNSGGSSVATTIIEKSEDIEEAARLAFNYDEEVMIEKYIEGDEITCCILDGTALPILAIKPNKGSFFDYTSKYADGGSEEIVVEFEKPLQSKIEEISLKCWELFKCKGYVRVDMILKDKVPYVLELNTLPGLTKNSLFPKSANGVNISFTELLDKII
type: DOMAIN
name: Dala_Dala_lig_C
description: D-alanine--D-alanine ligase, C-terminal
Protein sequence:
MAHSIWHEKIKSFLPEHYYGRINHFLDEAYASGLVYPQRENVFKALQVTPLEETKVLILGQDPYHGPKQAQGISFSVPEEISAPPSLINILKELADDIGPRDHHDLSTWASQGVLLLNACLTVPAGQANGHAGLIWEPFTDAVIKVLNEKDSPVVFILWGAYARKKKAFITNPKHHIIESPHPSPLSSYRGFFGSKPFSRTNAMLEKEGMIGIDWLQ

Annotated regions:
phrase: QVTPLEETKVLILGQDPYHGPKQAQGISFSVPEEISAPPSLINILKELADDIGPRDHHDLSTWASQGVLLLNACLTVPAGQANGHAGLIWEPFTDAVIKVLNEKDSPVVFILWGAYARKKKAFITNPKHHIIESPHPSPLSSYRGFFGSKPFSRTNAM
type: DOMAIN
name: Uracil-DNA_glycosylase-like
description: Uracil-DNA glycosylase-like

phrase: KVLILGQDP
type: ACTIVE_SITE
name: Ura-DNA_Glyclase_AS
description: Uracil-DNA glycosylase, active site

phrase: PLEETKVLILGQDPYHGPKQAQGISFSVPEEISAPPSLINILKELADDIGPRDHHDLSTWASQGVLLLNACLTVPAGQANGHAGLIWEPFTDAVIKVLNEKDSPVVFILWGAYARKKKAFITNPKHHIIESPHPSPLSSYRGFFGSKPFSRTNAM
type: DOMAIN
name: Uracil-DNA_glycosylase-like
description: Uracil-DNA glycosylase-like
Protein sequence:
MKVLALRHSVAQVYADTQTYLHDDSKDEYENAFLISNLTTHNILYLNYSLKTLKILNKSGIAAVEVQSPDELFALIRCNFTYDYENNIIYLHDYSYYTNNEIRTDQHWITKTDIIDYLLPGWKLTYVGYNGKNTRGHYNFSFSCQNAATDDDIIIEYIYSNELDFQNFLLRKIKERMTTSLPIARLSNRVFRDKLFPSIVNIYKKVINVGPRNESMFTFLNFPTIKQFSNGAYIVKHTIKLKQEKWLGKRVSQFDIGQYKNMLNVVTTIYYYYNLYHSKPIIYMLGSAPSYWIHDIKQYSDFTFETWDPLDTPYSTIHHKELFFDKDVNKLKDNSVLYIDIRTDRKNMDWKEWRKVVEQQTVNNLNIAYKYLSTGKAKVCCVKLTAMDLELPITAKLLHHPTTEVRSEFYAILDAWDIITIKRFIPKGVFYAFINNITTENVFIQPPFKLKASPTDYIVALYALSNDFNSRQDVINLINKQKQSLITVRMNNTFKDEPKVNFKNIYDWTFLPTDFELKDSIITSYDGCLGMFGLSISLSSKPTGNNHLFIINGTDKYYKLDQYANHMGISRRSHQIRFSESATSYSGYIFRDLSNNNFNLIGTNVENSVSGHVYNALIYYRYNYAFDLKRWIYLHSIGKVTVEGGRYYEHAPIELIYACRSAKEFAILQDDLTVLRYANEIEGYINKVYSITYADDPNYFIGIKFNSIPYEYDVKVPHLTLGVLFISDNMIHDVVTVLKKMKTELFKTEISTSYTYMLSDNIYVANASGVLSTYFKLYNMFYRNHITFGQSRMFIPHITLSFSNKQTVRIESTRLKINSIYLRKIKGETVFDMSE

Annotated regions:
Protein sequence:
MAVWLPAQNKFYLPTQPITKILSSDDYVSRTNIFYHATSDRLLIVGHPLYEVTRANDNTMTVPKVSPNQYRVFRVRFPDPNRFAFGDKDIFDPETERLVWGLRGIEIGRGQPLGVGISGNPLLNRFDDAENPSRYNNTHATGDNRQNVAFDAKQTQMFLIGCTPATGEHWSIARRCAGTQFQLGDCPPIELVNTVIEDGDMFDIGLGAMDFGSLQANKADAPLDIAGTVCKYPDYIKMGQEVHGNSLFFFARREQMYLRHVFTHAGIVSEKEKVPTSAYIAAKAEQPQNTIATDNYFVAPSGSLVSSDVQIFNRPYWLQRSQGQNNGICWRNELFVTVADNTRGTTMNINVLNKATPETYDSADYNEYTRHVEEYELSFIVQLCKVKLTPENLAFLHNMDPTIIDSWQLTVSQPPANAIEDKYRFIESLATKCPDNVPPPTPTDPYKDLRFWDVDLSERMSEQLDQFPLGRKFLYQSGLAQRSVPKTVNFRKRRSSNTTVAKRRRRA

Annotated regions:
Protein sequence:
MKLLAIDSSILTNTSVSRQLTRSFVSRWQKIYPETEVVYRDLHAQPINHLSQKILAANSVPSTQISAEIREEMNLSMQLISELLSASVLVIGAPMYNFSIPSQLKSWIDRIVIAGKTFKYVDGKVQGLATGKRAYILSSRGGFYNAEPALNLDHQERYLTSILNFIGISDITFIRAEGVNVGEEIRTQSLHQAEAKIQQLLQFQMA

Annotated regions:
phrase: MKLLAIDSSILTNTSVSRQLTRSFVSRWQKIYPETEVVYRDLHAQPINHLSQKILAANSVPSTQISAEIREEMNLSMQLISELLSASVLVIGAPMYNFSIPSQLKSWIDRIVIAGKTFKYVDGKVQGLATGKRAYILSSRGGFYNAEPALNLDHQERYLTSILNFIGISDITFIRAEGVNVGEEIRTQSLHQAEAKIQQ
type: DOMAIN
name: Flavodoxin_fold
description: Flavodoxin-like fold
Protein sequence:
MPYSSYPELEPSNPRFFEPTGIIVLVGLMGAGKTTIGRRVAARLGLPFVDADHEIERAAGCTIAEIFARHGEPAFRDGERRVIQRLLQGQPMVLATGGGAYLDSRTRKLIREHARSIWLRCPLPVLLRRLAGRTGRPLLAQGDLKTTLTALQAQRHPVYAEADLIVDCGDDSVENSAQRVLEALESYEHPVRVPVELDAHRYDVVIGPDLLARAGALLAPLLPQKRAVVITDVRVAALHLPKLLAALAETSIEAQVFTVPGGEESKSLAQYGALINDILAHGIERRTAVIGLGGGVIGDLSGFVAATVLRGVPFVQIPTTLLSQVDSSVGGKTGLNANTGKNLIGAFYQPLVVLADTSTLATLPKRERIAGYAEIVKAGLIADPELFAWCEAHGGDVLDGDPAAQIEAVRRACAFKARVVAADEREQAAQGGRALLNLGHSFAHALEACFGYDGRLLHGEAVSVGLHLAAALSVRLGYCPGSVLKRLDAHLRAHGMPAGLDWFPEPLSAETLIGHMARDKKVHDGRLAFVLLRDIGDSFTTRDVQMDVVRDFLVQEGCRY

Annotated regions:
phrase: FTVPGGEESKSLAQYGALINDILAHGIERRTAVIGLGGGVIGDLSGFVAATVLRGVPFVQIPTTLLSQVDSSVGGKTGLNANTGKNLIGAFYQPLVVLADTSTLATLPKR
type: DOMAIN
name: DHQS/DOIS_N
description: 3-dehydroquinate synthase, N-terminal domain

phrase: GYAEIVKAGLIADPELFAWCEAHGGDVLDGDPAAQIEAVRRACAFKARVVAADEREQAAQGGRALLNLGHSFAHALEACFGYDGRLLHGEAVSVGLHLAAALSVRLGYCPGSVLKRLDAHLRAHGMPAGLDWFPEPLSAETLIGHMARDKK
type: DOMAIN
name: DHQS_C
description: 3-dehydroquinate synthase, C-terminal domain
Protein sequence:
MANLLSKTRRITSILQRSVESLQSDLPYNTIADQLAEIIDCNACIIDGSGIILGYAMKYKTNTDRVEEFFQAKKLPDDYVKSASRIYDTEANLSVENDLTIFPIESKDIYPDGLTTIAPIYGGGMRLGSLIIWRNDKEFNDDDLILIEISSTVVGIQLLNLQTENLEETIRKQTAINMAINTLSYSEMKAVAAILNELDGNEGRLTASVIADRIGITRSVIVNALRKLESAGIIESRSLGMKGTYLKVINEGIFDKLKDYS

Annotated regions:
phrase: AILNELDGNEGRLTASVIADRIGITRSVIVNALRKLESAGIIESRSLGMKGTYLKVINEGIFDKLK
type: DOMAIN
name: ArsR-like_HTH
description: ArsR-like helix-turn-helix domain

phrase: EGRLTASVIADRIGITRSVIVNALRKLESAGIIESRSLGMKGTYLKVINEGIFDKLKD
type: DOMAIN
name: GTP_trans_reg_CodY_C
description: Global transcriptional regulator CodY, C-terminal

phrase: NLLSKTRRITSILQRSVESLQSDLPYNTIADQLAEIIDCNACIIDGSGIILGYAMKYKTNTDRVEEFFQAKKLPDDYVKSASRIYDTEANLSVENDLTIFPIESKDIYPDGLTTIAPIYGGGMRLGSLIIWRNDKEFNDDDLILIEISSTVVGIQLLNLQTENLEETIRKQTAINMAIN
type: DOMAIN
name: Transc_reg_CodY_N
description: Global transcriptional regulator CodY, N-terminal
Protein sequence:
MLRGTAAGGTLRLVGIEASKVVEEARRRHNLSKTATAALGRTMAASALLAVVLGKRTDSRVTVRVDGGGPVGWIVAEGSTDGRLRGYVRQPEADLPPRESDGKLDVRGIVGTDGELAVTRLLDNGEPYTGSVRLQSGEIAEDVSRYLGASEQIPNAVLLGVYEEGGRVANAGGLLIQAMPGVTDETLAKLEANIAAMGMLTDQLRNGGLLGAMQQAAAGLDLQLATDAQPAHFSCRCSREKAIDSLKFFGAEERQEMIDEGGQEVLCHWCSEKYHLTPEEIAALDEGEARAEA

Annotated regions:
Protein sequence:
MKKNTDSEMDQRLGYKFLVPDPKAGVFYRPLHFQYVSYSNFILHRLHEILTVKRPLLSFKNNTERIMIEISNVKVTPPDYSPIIASIKGKSYDALATFTVNIFKEVMTKEGISITKISSYEGKDSHLIKIPLLIGYGNKNPLDTAKYLVPNVIGGVFINKQSVEKVGINLVEKITTWPKFRVVKPNSFTFSFSSVSPPNVLPTRYRHYKISLDISQLEASNISSTKTFITVNIVLLSQYLSRVSLEFIRRSLSYDMPPEVVYLVNAIIDSAKRLTESITDFNIDTYINDLVEAEHIKQKSQLTINEFKYEMLHNFLPHMNYTPDQLKGFYMISLLRKFLYCIYHTSRYPDRDSMVCHRILTYGKYFETLAHDELENYIGNIRNDIMNNHKNRGTYAVNIHVLTTPGLNHAFSSLLSGKFKKSDGSYRTHPHYSWMQNISIPRSVGFYPDQVKISKMFSVRKYHPSQYLYFCSSDVPERGPQVGLVSQLSVLSSITNILTSEYLDLEKKICEYIRSYYKDDISYFETGFPITIENALVASLNPNMICDFVTDFRRRKRMGFFGNLEVGITLVRDHMNEIRINIGAGRLVRPFLVVDNGELMMDVCPELESRLDDMTFSDIQKEFPHVIEMVDIEQFTFSNVCESVQKFRMMSKDERKQYDLCDFPAEFRDGYVASSLVGINHNSGPRAILGCAQAKQAISCLSSDIRNKIDNGIHLMYPERPIVISKALETSKIAANCFGQHVTIALMSYKGINQEDGIIIKKQFIQRGGLDIVTAKKHQVEIPLENFNNKERDRSNAYSKLESNGLVRLNAFLESGDAMARNISSRTLEDDFARDNQISFDVSEKYTDMYKSRVERVQVELTDKVKVRVLTMKERRPILGDKFTTRTSQKGTVAYIADETELPYDENGITPDVIINSTSIFSRKTISMLIEVILTAAYSAKPYNNKGENRPVCFPSSNETSIDTYMQFAKQCYEHSNPKLSDEELSDKIFCEKILYDPETDKPYASKVFFGPIYYLRLRHLTQDKATVRCRGKKTKLIRQANEGRKRGGGIKFGEMERDCLIAHGAANTITEVLKDSEEDYQDVYVCENCGDIAAQIKGINTCLRCSKLNLSPLLTKIDTTHVSKVFLTQMNARGVKVKLDFERRPPSFYKPLDKVDLKPSFLA

Annotated regions:
phrase: GDKFTTRTSQKG
type: CONSERVED_SITE
name: RNA_pol_bsu_CS
description: RNA polymerase, beta subunit, conserved site

phrase: GGIKFGEMERDCLIAHGAANTITEVLKDSEEDYQDVYVCENCGDIAAQIKGINTCLRCSKLNLSPLLTKIDTTHVSKVFLTQMNARGVKVK
type: DOMAIN
name: RNA_pol_Rpb2_7
description: RNA polymerase Rpb2, domain 7

phrase: HPHYSWMQNISIPRSVGFYPDQVKISKMFSVRKYHPSQYLYFCSSDVPERGPQVGLVSQLSVLSS
type: DOMAIN
name: RNA_pol_Rpb2_3
description: RNA polymerase Rpb2, domain 3

phrase: INHNSGPRAILGCAQAKQAISCLSSDIRNKIDNGIHLMYPERPIVISKALETSKIAANCFGQHVTIALMSYKGINQEDGIIIKKQFIQRGGLDIVTAKKHQVEIPLENFNNKERDRSNAYSKLESNGLVRLNAFLESGDAMARNISSRTLEDDFARDNQISFDVSEKYTDMYKSRVERVQVELTDKVKVRVLTMKERRPILGDKFTTRTSQKGTVAYIADETELPYDENGITPDVIINSTSIFSRKTISMLIEVILTAAYSAKPYNNKGENRPVCFPSSNETSIDTYMQFAKQCYEHSNPKLSDEELSDKIFCEKILYDPETDKPYASKVFFGPIYYLRLRHLTQDKATVRCRGKKTKLIRQANEGRK
type: DOMAIN
name: DNA-dir_RNAP_su2_dom
description: DNA-directed RNA polymerase, subunit 2, hybrid-binding domain

phrase: FSDIQKEFPHVIEMVDIEQFTFSNVCESVQKFRMMSKDERK
type: DOMAIN
name: RNA_pol_Rpb2_5
description: RNA polymerase Rpb2, domain 5
Protein sequence:
MTRPEPNFKRHTARYRARRRAADILFEAESRDVDPVAIVEDRVELARDPENGVAPIADYTREIVSGAAEELDAIDDAIARYLSSEWSLERIPAVDRAIMRVSVWEILFNADVPNATALVEGVELASEYSNDKAAPYIHAVLDDVIQAQSADSPMAPASAEEPAEPAETAETEGDTK

Annotated regions:
phrase: RARRRAADILFEAESRDVDPVAIVEDRVELARDPENGVAPIADYTREIVSGAAEELDAIDDAIARYLSSEWSLERIPAVDRAIMRVSVWEILFNADVPNATALVEGVELASEYSNDKAAPYIHAVLDDV
type: DOMAIN
name: NusB_RsmB_TIM44
description: NusB/RsmB/TIM44
Protein sequence:
MAATTLTDLVADVNQRVPGLLTPHGDLEGRLVQAISDDSRRVEEGTLFFAIRGEVVDGHDYIEAVADAGGVAVVAEDVRTERIPTLLAESSRVATAHTSAAFHGHPSAEIQVVAVTGTNGKTSIVNLIEHLVRHAGRTAESFGTLTGTLTTAAAPRFQERLRSAADSGVTVVAAEVSSHALDQHRVDGTTFAIGIFTNLTQDHLDYHATMEAYFQAKARLFSMCEVAIIDVSNEWGRRLADLVDIPTIEVDATAETADLRPNGSSFDWQGQRVSIPLGGRFNVSNAILAAEAALCLGLEVDDVVAGLVAVPQIPGRFEWVAAGQLFGIVVDYSHTPAGLEAAIATARELIPEDGRVFVVFGAGGDRDPGKRPMMGAASLSADVVIVTSDNPRTEDPGTIIDHIFQGIDMSADATIVREVDRRAAIGMAIADAREGDIVVIAGKGHEQYQIIGETRHEFDDRLVARSAVNTIAEAGRA

Annotated regions:
phrase: GRFEWVAAGQLFGIVVDYSHTPAGLEAAIATARELIPEDGRVFVVFGAGGDRDPGKRPMMGAASLSADVVIVTSDNPRTEDPGTIIDHIFQGIDMSADATIVREVDRRAAIGMAIADAREGDIVVIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: VAVTGTNGKTSIVNLIEHLVRHA
type: CONSERVED_SITE
name: Folylpolyglutamate_synth_CS
description: Folylpolyglutamate synthetase, conserved site

phrase: AISDDSRRVEEGTLFFAIRGEVVDGHDYIEAVADAGGVAVVAEDV
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: VTGTNGKTSIVNLIEHLVRHAGRTAESFGTLTGTLTTAAAPRFQERLRSAADSGVTVVAAEVSSHALDQHRVDGTTFAIGIFTNLTQDHLDYHATMEAYFQAKARLFSMCEVAIIDVSNEWGRRLADLVDIPTIEVDATAETADLRPNGSSFDWQGQRVSIPLGGRFNVSNAILAAE
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central
Protein sequence:
MNYQPTPEDRFTFGLWTVGWQGRDPFGDATRPALDPVEAVQRLAELGAYGVTFHDDDLIPFGSSDAEREAHVKRFRQALDATGMTVPMATTNLFTHPVFKDGAFTANDRDVRRYALRKTIRNIDLAVELGAKVYVAWGGREGAESGAAKDVRAALDRMKEAFDLLGEYVTSQGYDIRFAIEPKPNEPRGDILLPTIGHALAFIERLERPELYGVNPEVGHEQMAGLNFPHGIAQALWAGKLFHIDLNGQSGIKYDQDLRFGAGDLRAAFWLVDLLESAGWEGPRHFDFKPPRTEDIDGVWASAAGCMRNYLILKERAAAFRADPEVQEALRAARLDQLAEPTAADGLQALLADRTAYEDFDVDAAAARGMAFERLDQLAMDHLLGARG

Annotated regions:
phrase: VQRLAELGAYGVTFHDDDLIPFGSSDAEREAHVKRFRQALDATGMTVPMATTNLFTHPVFKDGAFTANDRDVRRYALRKTIRNIDLAVELGAKVYVAWGGREGAESGAAKDVRAALDRMKEAFDLLGEYVTSQGYDIRFAIEPKPNEPRGDILLPTIGHALAFIERLERPELYGVNPEVGHEQMAGLNFPHGIAQALWAGKLFHIDLNGQSGIKYDQDLRFGAGDLRAAFWLVDLLESAGWEGPRHFDFKPPRTEDIDGVWASAAGCM
type: DOMAIN
name: Xyl_isomerase-like_TIM-brl
description: Xylose isomerase-like, TIM barrel domain
Protein sequence:
MAVSDNTFSMSTMFNALPNPTETSGYIPPSGFAPRASATPLHAALFNLMTDGDGVSYFKEMISKSDKTELQRMASLLTSDSDYFMSIVTTKFGSRRVQKLLGKSDDVDAFFCAAILRRFLHITTDKYASYVTIRAMVVFDKVMKKALYERILYHALDLACDQHGCIALNDIITDADDPYYRDQLLELVVSNALRLSNDASGNFVVQHVLTLYDSRCIHNIAVNLYGQCIELSFKKYGSYIVEKLLEVEESMVVVVVELLGCDGDRLMRLARNEFGNFVVVKALRFTKEMRMDLFWGLVQKLMPFIHLLRRSHGNNIANILDTFRLRC

Annotated regions:
phrase: HALDLACDQHGCIALNDIITDADDPYYRDQLL
type: REPEAT
name: Pumilio_RNA-bd_rpt
description: Pumilio RNA-binding repeat

phrase: QCIELSFKKYGSYIVEKLLE
type: REPEAT
name: Pumilio_RNA-bd_rpt
description: Pumilio RNA-binding repeat

phrase: FLHITTDKYASYVTIR
type: REPEAT
name: Pumilio_RNA-bd_rpt
description: Pumilio RNA-binding repeat

phrase: ALRLSNDASGNFVVQHVL
type: REPEAT
name: Pumilio_RNA-bd_rpt
description: Pumilio RNA-binding repeat

phrase: NLYGQCIELSFKKYGSYIVEKLLEVEESMVVVVVELL
type: REPEAT
name: Pumilio_RNA-bd_rpt
description: Pumilio RNA-binding repeat

phrase: ELVVSNALRLSNDASGNFVVQHVLTLYDSRCIHNIA
type: REPEAT
name: Pumilio_RNA-bd_rpt
description: Pumilio RNA-binding repeat

phrase: MAVSDNTFSMSTMFNALPNPTETSGYIPPSGFAPRASATPLHAALFNLMTDGDGVSYFKEMISKSDKTELQRMASLLTSDSDYFMSIVTTKFGSRRVQKLLGKSDDVDAFFCAAILRRFLHITTDKYASYVTIRAMVVFDKVMKKALYERILYHALDLACDQHGCIALNDIITDADDPYYRDQLLELVVSNALRLSNDASGNFVVQHVLTLYDSRCIHNIAVNLYGQCIELSFKKYGSYIVEKLLEVEESMVVVVVELLGCDGDRLMRLARNEFGNFVVVKALRFTKEMRMDLFWGLVQKLMPFIHLLRRSHGNNIANILDTF
type: DOMAIN
name: PUM-HD
description: Pumilio homology domain

phrase: CDGDRLMRLARNEFGNFVVVKALRFTKEMRMDLF
type: REPEAT
name: Pumilio_RNA-bd_rpt
description: Pumilio RNA-binding repeat

phrase: RILYHALDLACDQHGCIALNDIITDADDPYYRDQLL
type: REPEAT
name: Pumilio_RNA-bd_rpt
description: Pumilio RNA-binding repeat

phrase: LVVSNALRLSNDASGNFVVQHVLTLYDSRCIHNIA
type: REPEAT
name: Pumilio_RNA-bd_rpt
description: Pumilio RNA-binding repeat

phrase: NLYGQCIELSFKKYGSYIVEKLLEVEESMVVVVV
type: REPEAT
name: Pumilio_RNA-bd_rpt
description: Pumilio RNA-binding repeat

phrase: AILRRFLHITTDKYASYVTIRAMVVFDKVMKKALY
type: REPEAT
name: Pumilio_RNA-bd_rpt
description: Pumilio RNA-binding repeat

phrase: SDSDYFMSIVTTKFGSRRVQKLLGKSDDVDAFF
type: REPEAT
name: Pumilio_RNA-bd_rpt
description: Pumilio RNA-binding repeat
Protein sequence:
MAIKHLPKILIARKNKAEVNHCDLKRRVSIKIIYGLGNPGSAFVKSRHSLGKLMVSMYADSMAFPKNWPSTKENLTLVLSTSYMNDSGKQLKKISNDFVRKVSPLDKIVYVVVHDELELDLGKVKLRLPGGSHRGHNGIRSCQEFLGKESFYRIGLGIGRCESRNREDVSDYVLSKFNSNEMKLIETDIFHKFCNILQQLQLSIET

Annotated regions:
phrase: SHRGHNGIRS
type: CONSERVED_SITE
name: Pept_tRNA_hydro_CS
description: Peptidyl-tRNA hydrolase, conserved site
Protein sequence:
MPEQEPLSPNGRKRSEVHYISIPLNRGSAFSPDDSVSQFQSDGFMTRRQSILDHPVGSFKGVNSLSRFATSLRRANSFRNIELNADNERSFFKESNDETYDPDTLAPALDGRRLSVTLNNAGRPRITNLANNDRVSTASMAIHDDDYGSIQNSTIGDSGSILRPTASLTEMMSGGAGRRFTNNDMDSIVVKRVEGVDGKVVTLLAGQSTAPQTIFNSINVLIGIGLLALPLGLKYAGWVIGLTMLAIFALATFCTAELLSRCLDTDPTLISYADLGYAAFGTKGRALISALFTLDLLGSGVSLVILFGDSLNALFPQYSTTFFKIVSFFIVTPPVFIPLSVLSNISLLGILSTTGTVLVICCCGLYKSSSPGSLVNPMETSMWPIDLKHLCLSIGLLSACWGGHAVFPNLKTDMRHPDKFKDCLKTTYKITSVTDIGTAVIGFLMFGNLVKDEITKNVLLTEGYPKFVYGLISALMTIIPIAKTPLNARPIVSVLDVLMNVQHIDEAASAIKRRAAKGLQVFNRIFINVVFVLIAINFPEFDKIIAFLGAGLCFTICLILPCWFYLRLCKTTIKPWERVACHVTICISVVLSTLGVGAAIIS

Annotated regions:
phrase: QSTAPQTIFNSINVLIGIGLLALPLGLKYAGWVIGLTMLAIFALATFCTAELLSRCLDTDPTLISYADLGYAAFGTKGRALISALFTLDLLGSGVSLVILFGDSLNALFPQYSTTFFKIVSFFIVTPPVFIPLSVLSNISLLGILSTTGTVLVICCCGLYKSSSPGSLVNPMETSMWPIDLKHLCLSIGLLSACWGGHAVFPNLKTDMRHPDKFKDCLKTTYKITSVTDIGTAVIGFLMFGNLVKDEITKNVLLTEGYPKFVYGLISALMTIIPIAKTPLNARPIVSVLDVLMNVQHIDEAASAIKRRAAKGLQVFNRIFINVVFVLIAINFPEFDKIIAFLGAGLCFTICLILPCWFYLRLCKTTIKPWERVACHVTICISVVLSTLGVGAA
type: DOMAIN
name: AA_transpt_TM
description: Amino acid transporter, transmembrane domain
Protein sequence:
MTSEQSIPDITATPAWEALRKHHDQIGETHLRQIFADDPNRGHDLTVTVGDLYIDYSKHRITRDTISLLVDLARTANLEAHRDQMFAGAHINTSEDRAVLHTALRLPRDAELIVDGRNVVEDVHAVLDAMGDFTDRLRSGEWTGATGKRISTVVNIGIGGSDLGPVMVYQALRHYADAGISARFVSNVDPADLIATLADLDPATTLFIVASKTFSTLETLTNATAARRWLTDALGDAAVSQHFVAVSTNRRLVDDFGINTDNMFGFWDWVGGRYSVDSAIGLSVMAAIGREAFADFLSGFHIVDEHFRTAPLESNAPALLGLIGLWYSNFLGAQSRAVLPYSNDLARFAAYLQQLTMESNGKSTRADGTAVTTDTGEIYWGEPGTNGQHAFYQLLHQGTRLVPADFIGFSQPIDDLPTVEGTGSMHDLLMSNFFAQTQVLAFGKTAEEIAAEGTPAAVVPHKVMPGNRPSTSILANRLTPSVLGQLIALYEHQVFTEGVVWGIDSFDQWGVELGKTQAKALLPVITSDGSPQRQSDSSTDALVRRYRTQRGRTG

Annotated regions:
phrase: QSRAVLPYSNDLARFAAYLQQLTMESNGKSTRADGTAVTTDTGEIYWGEPGTNGQHAFYQLLHQGTRLVPADFIGFSQPIDDLPTVEGTGSMHDLLMSNFFAQTQVLAFGKTAEEIAAEGTPAAVVPHKVMPGNRPSTSILANRLTPSVLGQLIALYEHQVFTEGVVWGIDSFDQWGVELGKTQAKA
type: DOMAIN
name: SIS_PGI_2
description: Phosphoglucose isomerase, SIS domain 2

phrase: DWVGGRYSVDSAI
type: CONSERVED_SITE
name: Phosphoglucose_isomerase_CS
description: Phosphoglucose isomerase, conserved site

phrase: GVVWGIDSFDQWGVELG
type: CONSERVED_SITE
name: Phosphoglucose_isomerase_CS
description: Phosphoglucose isomerase, conserved site

phrase: HAVLDAMGDFTDRLRSGEWTGATGKRISTVVNIGIGGSDLGPVMVYQALRHYADAGISARFVSNVDPADLIATLADLDPATTLFIVASKTFSTLETLTNATAARRWLTDALGDAAVSQHFVAVSTNRRLVDDFGINTDNMFGFWDWVGGRYSVDSAIGLSVMA
type: DOMAIN
name: SIS_PGI_1
description: Phosphoglucose isomerase, SIS domain 1
Protein sequence:
MLLMLTQWLQGLSPELSFLRVFQYLTLRAVMAALTALLIGLIAGPKVIRMLTSLKIGQPIRGYAMQTHLSKSGTPTMGGVLILGSIAISTLLWFDLSNRFVWIVLAVTLGFGAIGWVDDWRKVVNKDPEGMRSREKYFWQSVIGLLAALYLVFSISENSNTRVFELFITWVQSGFLMDLPPKAGLLVPFFKEVSYPLGVLGFVILTYLVIVGSSNAVNLTDGLDGLAIMPVIMVGASLGIFAYVTGNAGYAKYLLFPYIAGSGELLIFCAAMAGAGLAFLWFNTHPAQVFMGDVGALALGAALGTIAVIVRQEIVLAIMGGIFVVEALSVMLQVTWFKYTKRKYGEGRRLLKMAPLHHHFEKSGWKETQVVVRFWIITMLLCLVGLTTLKLR

Annotated regions:
phrase: KSGTPTMGGVLI
type: CONSERVED_SITE
name: PNAcMuramoyl-5peptid_Trfase_CS
description: Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site

phrase: KSGTPTMGGVLI
type: CONSERVED_SITE
name: PNAcMuramoyl-5peptid_Trfase_CS
description: Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site

phrase: NAVNLTDGLDG
type: CONSERVED_SITE
name: PNAcMuramoyl-5peptid_Trfase_CS
description: Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site
Protein sequence:
MAGPKRFNKDKRPKRNTQSLLFKRKRFCRFTAAGVEEIDYKDIDTLRDFVSENGKIIPARLTGTRAIFQRQINTAVKRARFLAMLPYSDQHRSL

Annotated regions:
phrase: IDYKDIDTLRDFVSENGKIIPAR
type: CONSERVED_SITE
name: Ribosomal_bS18_CS
description: Small ribosomal subunit protein bS18, conserved site
Protein sequence:
MRAKGMRKNYQHLWKWGILLLGIWMISSAEEQLWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVALVNVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTDVNATNAENATTPTSSSGGLMERGEIKNCSFNITASIRDKMQREYALFYKLDVVPIDRDNTSYRLISCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCRDKKFNGTGPCKNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSVNFSDNAKTIIVQLKEAVEIKCTRPSNNTRKSIPIGPGRAFYTTGEIIGDIRQAHCNISGEKWNNTLGQIVKKLKEQFENSTIVFNQSSGGDPEIVMHSFNCGGEFFYCNTSQLFNSIWNSAEKTNITKGIITLPCRIKQIINMWQEVGKAMYAPPIRGNISCSSNITGLLLTRDGSNGNGTGNRTEIFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPSKAKRRVVQREKRAVTLGALFLGFLGAAGSTMGAASMTLTVQARLLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLQDQQLLGIWGCSGKLICTTAVPWNTSWSNKSIDAIWHNMTWMEWEREIDNYTNSIYSLLEKSQNQQEKNEQELLELDKWASLWSWFDITNWLWYIKIFIIIVGGLVGLRIVFIVISLVNRVRQGYSPLSLQTHFPAPRGPDRPEGIEEEGGGRDRDGSGRLVDGFLALFWDDLRSLCLFSYHR

Annotated regions:
phrase: LWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVALVNVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTDVNATNAENATTPTSSSGGLMERGEIKNCSFNITASIRDKMQREYALFYKLDVVPIDRDNTSYRLISCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCRDKKFNGTGPCKNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSVNFSDNAKTIIVQLKEAVEIKCTRPSNNTRKSIPIGPGRAFYTTGEIIGDIRQAHCNISGEKWNNTLGQIVKKLKEQFENSTIVFNQSSGGDPEIVMHSFNCGGEFFYCNTSQLFNSIWNSAEKTNITKGIITLPCRIKQIINMWQEVGKAMYAPPIRGNISCSSNITGLLLTRDGSNGNGTGNRTEIFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPSKAKRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: VQARLLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLQDQQLLGIWGCSGKLICTTAVPWNTSWSNKSIDAIWHNMTWMEWEREIDNYTNSIYSLLEKSQNQQEKNEQELLELD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASMTLTVQARLLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLQDQQLLGIWGCSGKLICTTAVPWNTSWSNKSIDAIWHNMTWMEWEREIDNYTNSIYSLLEKSQNQQEKNEQELLELDKWASLWSWFDITNWLWYIKIFIIIVGGLVGLRIVFIVISLVNRVRQGYSPLSL
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MPKQLSFSNESREALEKGINTVANAVKVTIGPKAKNVVIERKFGSPDIVRDGSTVAKEINLDNPISNLGAKLIEQVASKTKESAGDGTTTATILTQIMVQEGLKNIAAGASPIELKKGMEKGLNFVLEKLRSKSIKINGSDIKKVATVSAGGDEDIGSIISKAMDIVTSDGVITVEESQSLETELDITEGMSFDRGYSSPYFVTDQERQICELENPKILITDQKISTLTNLVPILEEVQKSASPFLILAEDIEGEALTTLVLNKNSGVLNVSAVRAPSFGERRKAALEDIAILTGAKLISEDQSMKLEEVTLNDLGKAKKITISKDKTTIVAFDDTKDLVQERVEKLKREVEITESEYDKDKINERIAKLAGGVALIKVGAATETEMKYKKLRIEDSLNATKAAIEEGVVSGGGQTLIEISNELSNSRKEISDDLTTGIDIITNALLEPTKQIAKNAGFNGDVVIADIKRLGKGFNANNGEYENLNESGILDPTKVIRLALQDSVSIAAMIITTEVAVADIPEPEAAPGGPGADPMGGMGGMGGMGGMGGMGMPGMGGMGMPGMGGMGMPGMGGMGMPGMM

Annotated regions:
phrase: AAIEEGVVSGG
type: CONSERVED_SITE
name: Chaperonin_Cpn60_CS
description: Chaperonin Cpn60, conserved site
Protein sequence:
MQIPTLIDSMANKLHKKPPPLLKLTVIASDAEFHPPPLLGISYEELGSKLVNFATTRNVAMEFRIISSSYSDGLSSLIEQLRIDPFVFNEALVVNCHMMLHYIPDEILTSNLRSVFLKELRDLNPTIVTLIDEDSDFTSTNFISRLRSLYNYMWIPYDTAEMFLTRGSEQRQWYEADISWKIDNVVAKEGAERVERLEPKSR

Annotated regions:
Protein sequence:
KQFTKCELSQNLYDIDGYGRIALPELICTMFHTSGYDTQAIVENNESTEYGLFQISNALWCKSSQSPQSRNICDITCDKFLDDDITDDIMCAKKILDIKGIDYWIAHKALCTEKLEQWLCEKE

Annotated regions:
phrase: CDITCDKFLDDDITDDIM
type: DOMAIN
name: Glyco_hydro_22_CS
description: Glycoside hydrolase family 22 domain
Protein sequence:
MAGHSKWANIKRQKARVDAKKGSLFTKLSRAIIVAARNGLPDPDANFRLRSAVEKAKAAGMPAETIERAIAKGSGNWADDSPLEEIRYEGYGPGGVAVLIEAMTDNRNRTAAEVREAFSKVGGSLGESGCVSWLFRQKGVISLEGVTDPEALLLAVAEAGGEDLKVEGTDAEVYCDYTLLEQVATYLKKEGYQVQEAAIRWIPSTEVHVEDPETAKLVLTLMERLDHLDDVQNVYANFEIDEALMESLA

Annotated regions:
phrase: LEEIRYEGYGPGGVAVLIEAMTDNRNRTAAEVREAFSKVGGSLGESGCVSWLFRQKGVISLEGVTDPEALLLAVAEAGGEDLKVEGTDAEVYCDYTLLEQVATYLKKEGYQVQEAAIRWIPSTEVHVEDPETAKLVLTLMERLDHLDDVQNVYAN
type: DOMAIN
name: TACO1_YebC-like_2nd/3rd_dom
description: TACO1/YebC-like, second and third domains

phrase: SKWANIKRQKARVDAKKGSLFTKLSRAIIVAARNGLPDPDANFRLRSAVEKAKAAGMPAETIERAIAKGSG
type: DOMAIN
name: TACO1_YebC_N
description: TACO1/YebC-like, N-terminal domain
Protein sequence:
MALPILLDCDPGHDDAIAIVLALASPELDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDIPVAGGAVKPLMRELIIADNVHGESGLDGPALPEPTFAPQNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGNWTPAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDFFLEYHKDEKWGFVGAPLHDPCTIAWLLKPELFTSVERWVGVETQGKYTQGMTVVDYYYLTGNKPNATVMVDVDRQGFVDLLADRLKFYA

Annotated regions:
phrase: DCDPGHDDAI
type: CONSERVED_SITE
name: I/U_nuclsd_hydro_CS
description: Inosine/uridine-preferring nucleoside hydrolase, conserved site

phrase: ILLDCDPGHDDAIAIVLALASPELDVKAITSSAGNQTPEKTLRNVLRMLTLLNRTDIPVAGGAVKPLMRELIIADNVHGESGLDGPALPEPTFAPQNCTAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGNWTPAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHKAQIHVEDTERFRAIGNPVSTIVAELLDFFLEYHKDEKWGFVGAPLHDPCTIAWLLKPELFTSVERWVGVETQGKYTQGMTVVDYYYLTGNKPNATVMVDVDRQGF
type: DOMAIN
name: Inosine/uridine_hydrolase_dom
description: Inosine/uridine-preferring nucleoside hydrolase domain
Protein sequence:
MNPPTVTVHDSTLRDGQHAVRHQLDADQIRAYAVAADTAGVPVLEVGHGNGIGASSRQVGLSKTDDATMLTTAREAMPHSRLATLMLPGWATSTDLRSAIRHGVDIVRVAAHCTEADVTERHLGVIRDLGAEAQGVLLMSHLAAPDELAAQCQRMVGYGAQAVCIFDSAGTYLPEDVTARITAITTAVDVPVAFHGHNNLGMAVANSLAAVRAGARVLDACARGFGAGAGNTQLEVLVAVLERYGHPTGIDLRLVAQAADLAERTLMPAPPTIDSTSLVSGLAGVFSGFKKPVLAAAQRAGVSPWDVFVELGRRRVLAGQEDLIPDAINTLTSMGERP

Annotated regions:
phrase: PTIDSTSLVSGLAGVFSGFKKPVLAAAQRAGVSPWDVFVELGRRRVLAGQEDLIPDAINTL
type: DOMAIN
name: DmpG_comm
description: DmpG-like communication

phrase: VTVHDSTLRDGQHAVRHQLDADQIRAYAVAADTAGVPVLEVGHGNGIGASSRQVGLSKTDDATMLTTAREAMPHSRLATLMLPGWATSTDLRSAIRHGVDIVRVAAHCTEADVTERHLGVIRDLGAEAQGVLLMSHLAAPDELAAQCQRMVGYGAQAVCIFDSAGTYLPEDVTARITAITTAVDVPVAFHGHNNLGMAVANSLAAVRAGARVLDACARGFGAGAGNTQLEVLVAVLERYGHPTGIDLRLV
type: DOMAIN
name: PYR_CT
description: Pyruvate carboxyltransferase

phrase: VTVHDSTLRDGQHAVRHQLDADQIRAYAVAADTAGVPVLEVGHGNGIGASSRQVGLSKTDDATMLTTAREAMPHSRLATLMLPGWATSTDLRSAIRHGVDIVRVAAHCTEADVTERHLGVIRDLGAEAQGVLLMSHLAAPDELAAQCQRMVGYGAQAVCIFDSAGTYLPEDVTARITAITTAVDVPVAFHGHNNLGMAVANSLAAVRAGARVLDACARGFGAGAGNTQLEVLVAVLERYGHPTGIDLRLVAQAADLAERTL
type: DOMAIN
name: DRE_TIM_HOA
description: 4-hydroxy-2-oxovalerate aldolase, N-terminal catalytic TIM barrel domain

phrase: TVHDSTLRDGQHAVRHQLDADQIRAYAVAADTAGVPVLEVGHGNGIGASSRQVGLSKTDDATMLTTAREAMPHSRLATLMLPGWATSTDLRSAIRHGVDIVRVAAHCTEADVTERHLGVIRDLGAEAQGVLLMSHLAAPDELAAQCQRMVGYGAQAVCIFDSAGTYLPEDVTARITAITTAVDVPVAFHGHNNLGMAVANSLAAVRAGARVLDACARGFGAGAGNTQLEVLVAVLERYGHPTGIDLRLVAQAAD
type: DOMAIN
name: PYR_CT
description: Pyruvate carboxyltransferase