Protein sequence:
MGNGNSALLGTDLDKFEKIRLKRGGKKCYRLKHLCWCKGELDRFGLSDKLLETQQGCEKILSVCWPLYDQGSDNLKALVGTVCVVACIHAGIEIKSTQDALKKLKVITRKEEKQEDESKNFPVQRDAAGQYQYTPISPRIIQTWVKTVEEKKWKPEVIPLFSALTEGAISHDLNIMLNAVGDHQGAMQVLKDVINEQAAEWDLTHPQQQPAQPGGGLRTPSGSDIAGTTSTVEEQLAWMNMQQNAINVGTIYKSWIILGMNRLVKSHCPISITDVRQGPKEAFKDYVDRFYNVMRAEQASGEVKMWMQQHLLIENANPECKQILRSLGKGATLEEMLEACQGVGGPQHKARLMAEMMRTVVGQSQNFVQQRGPQRGPVRQPTGRKPICFNCNKEGHVARFFKAPRRKGCWNCGAMDHQKAQCPKPAQQQRVNFFRVWPLGSLQTGELSGTRGDSNSSTIRGETSAENSEHLSEIRERAQAEDEGGEERGGFSFPEYSLSRRPIEEVSVDGVTIRALLDTGADDTIFNERNIKLKGNWQPKIIGGIGGNLRVKQYDNVYVEIRGKGTFGTVLIGPTPIDIIGRNIMEKLGGKLILAQLSDKIPITKVKLKPGVDGPRIKQWPLSKEKIVGLQKICDRLEEEGKISRVDPGNNYNTPIFAIKKKDKNEWRKLIDFRELNKLTQDFHELQLGIPHPAGIKKCKRITVLDIGDAYFSIPLDPDYRPYTAFTVPSVNNQAPGKRYMYNVLPQGWKGSPCIFQGTVASLLEVFRKNHPTVQLYQYMDDLFVGSDYTAEEHEKAIVELRALLMTWNLETPEKKYQKEPPFHWMGYELHPDKWKIEKVQLPELAEQPTVNEIQKLVGKLNWAAQLYPGIKTKQLCKLIRGGLNITEKVTMTEEARLEYEQNKEILAEEQEGSYYDPNKELYVRFQKTTGGDISFQWKQGNKVLRAGKYGKQKTAHSNDLMKLAGATQKVGRESIVIWGFVPKMQIPTTREIWEDWWHEYWQCTWIPEVEFISTPMLEREWYSLSPEPLEGVETYYVDGAANRDSKMGKAGYITDRGFQRVEEYLNTTNQQTELHAVKLALEDSGSYVNIVTDSQYVVGILASRPTETDHPIVKEIIELMKGKEKIYLSWLPAHKGIGGNEQIDKLVSSGIRKVLFLQNIEPAQEEHEKYHSNEAQLREKFHLPALVAKQIVQSCSKCCHHGEPIKGQTDASLGVWQIDCTHLENQIIIVAVHVASGFMKAEVITAETGKKTAEFLLKLAAQWPISKLHTDNGPNFTSQEVETMCWWLGIEHTFGIPYNPQSQGVVENKNKYLKELIEKIREDCKELKTAVAMATFIHNFKQRGGLGGMTAGERIVNMINTELEYQYQQNQISKNLNFKVYFREGRDQLWKGPGILLWKGEGAVVLKYQEEIKIVPRRKCKIIKDYGESGKNSQVNLESV

Annotated regions:
phrase: FKVYFREGRDQLWKGPGILLWKGEGAVVLKYQEEIKIVPRRKCKIIK
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: CWNCGAMDHQKAQCP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: IKKKDKNEWRKLIDFRELNKLTQDFHELQLGIPHPAGIKKCKRITVLDIGDAYFSIPLDPDYRPYTAFTVPSVNNQAPGKRYMYNVLPQGWKGSPCIFQGTVASLLEVFRKNHPTVQLYQYMDDLFVGSDYTAEEHEKAIVELRALLMTWNLETPEKKYQKEPPFHWMGYE
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: AQEEHEKYHSNEAQLREKFHLPALVAKQIVQSCSKC
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: GNSALLGTDLDKFEKIRLKRGGKKCYRLKHLCWCKGELDRFGLSDKLLETQQGCEKILSVCWPLYDQGSDNLKALVGTVCVVACIHAGIEIKSTQDALKKLKVITRKEEKQEDESKN
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: QNIEPAQEEHEKYHSNEAQLREKFHLPALVAKQIVQSCSKC
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: ISITDVRQGPKEAFKDYVDRFYNVMRAEQASGEVKMWMQQHLLIENANPECKQILRSLGKGATLEEMLE
type: DOMAIN
name: Gag_p24_C
description: Retroviral nucleocapsid Gag protein p24, C-terminal domain

phrase: VYFREGRDQLWKGPGILLWKGEGAVVLKYQEEIKIVPRRKCKI
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: IRALLDTGADDTIFNERNIKLKGNWQPKIIGGIGGNLRVKQYDNVYVEIRGKGTFGTVLIGPTPIDIIGRN
type: DOMAIN
name: Peptidase_A2_cat
description: Peptidase A2A, retrovirus, catalytic

phrase: ICFNCNKEGHVARFFK
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: GCWNCGAMDHQKAQCP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: LEGVETYYVDGAANRDSKMGKAGYITDRGFQRVEEYLNTTNQQTELHAVKLALEDSGSYVNIVTDSQYVVGILASRPTETDHPIVKEIIELMKGKEKIYLSWLPAHKGIGGNEQIDKLVSSGI
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: EGKISRVDPGNNYNTPIFAIKKKDKNEWRKLIDFRELNKLTQDFHELQLGIPHPAGIKKCKRITVLDIGDAYFSIPLDPDYRPYTAFTVPSVNNQAPGKRYMYNVLPQGWKGSPCIFQGTVASLLEVFRKNHPTVQLYQYMDDLFVGSDYTAEEHEKAIVELRALLMTWNLETPEKKYQKEPPFHWMGYE
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: SLGVWQIDCTHLENQIIIVAVHVASGFMKAEVITAETGKKTAEFLLKLAAQWPISKLHTDNGPNFTSQEVETMCWWLGIEHTFGIPYN
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: GNSALLGTDLDKFEKI
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: KRGGKKCYRLKHLCWCKG
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: DRFGLSDKLLETQQG
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: QGSDNLKALVGTVCVVACI
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: HAGIEIKSTQDAL
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: GCWNCGAMDHQKAQCP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: ICFNCNKEGHVA
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: EQPTVNEIQKLVGKLNWAAQLYPGIKTKQLCKLIRGGLNITEKVTMTEEARL
type: DOMAIN
name: RVT_thumb
description: Reverse transcriptase thumb

phrase: ALLDTGADDTI
type: ACTIVE_SITE
name: Aspartic_peptidase_AS
description: Aspartic peptidase, active site

phrase: TYYVDGAANRDSKMGKAGYITDRGFQRVEEYLNTTNQQTELHAVKLALEDSGSYVNIVTDSQYVVGILASRPTETDHPIVKEIIELMKGKEKIYLSWLPAHKGIGGNEQIDKLVSSG
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: HHGEPIKGQTDASLGVWQIDCTHLENQIIIVAVHVASGFMKAEVITAETGKKTAEFLLKLAAQWPISKLHTDNGPNFTSQEVETMCWWLGIEHTFGIPYNPQSQGVVENKNKYLKELIEKIREDCKELKTAVAMATFIHNFKQRGGLGGMTAGERIVNM
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: YYDPNKELYVRFQKTTGGDISFQWKQGNKVLRAGKYGKQKTAHSNDLMKLAGATQKVGRESIVIWGFVPKMQIPTTREIWEDWWHEYWQCTWIPEVEFIS
type: DOMAIN
name: RVT_connect
description: Reverse transcriptase connection

phrase: VDGVTIRALLDTGADDTIFNERNIKLKGNWQPKIIGGIGGNLRVKQYDNVYVEIRGKGTFGTVLIGPTPIDIIGRNIM
type: DOMAIN
name: Retropepsin-like_cat_dom
description: Retropepsin-like catalytic domain

phrase: RRPIEEVSVDGVTIRALLDTGADDTIFNERNIKLKGNWQPKIIGGIGGNLRVKQYDNVYVEIRGKGTFGTVLIGPTPIDIIGRNIMEKLGGK
type: DOMAIN
name: Retropepsins
description: Retropepsins