nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MNALNIGRNDFSEIELAAIPYNILSEHYGDQAAREQLALEHEAYELGRQRFLKMLERQVKAGEFADNAAAKPLVLTLHPQLTKRIDDWKEEQANARGKKPRAYYPIKHGVASELAVSMGAEVLKEKRGVSSEAIALLTIKVVLGNAHRPLKGHNPAVSSQLGKALEDEARFGRIREQEAAYFKKNVADQLDKRVGHVYKKAFMQVVEADMISKGMLGGDNWASWKTDEQMHVGTKLLELLIEGTGLVEMTKNKMADGSDDVTSMQMVQLAPAFVELLSKRAGALAGISPMHQPCVVPPKPWVETVGGGYWSVGRRPLALVRTHSKKALRRYADVHMPEVYKAVNLAQNTPWKVNKKVLAVVNEIVNWKHCPVGDVPAIEREELPPRPDDIDTNEVARKAWRKEAAAVYRKDKARQSRRCRCEFMVAQANKFANHKAIWFPYNMDWRGRVYAVSMFNPQGNDMTKGSLTLAKGKPIGLDGFYWLKIHGANCAGVDKVPFPERIKFIEENEGNILASAADPLNNTWWTQQDSPFCFLAFCFEYAGVKHHGLNYNCSLPLAFDGSCSGIQHFSAMLRDSIGGRAVNLLPSDTVQDIYKIVADKVNEVLHQHAVNGSQTVVEQIADKETGEFHEKVTLGESVLAAQWLQYGVTRKVTKRSVMTLAYGSKESLVRQQVLEDTIQPAIDNGEGLMFTHPNQAAGYMAKLIWDAVTVTVVAAVEAMNWLKSAAKLLAAEVKDKKTKEVLRKRCAIHWVTPDGFPVWQEYRKQNQARLKLVFLGQANVKMTYNTGKDSEIDAHKQESGIAPNFVHSQDGSHLRMTVVHANEVYGIDSFALIHDSSGTIPADAGNLFKAVRETMVKTYEDNDVIADFYDQFADQLHESQLDKMPAVPAKGDLNLRDILESDFAFA

Annotated regions:
phrase: REQLALEHEAYELGRQRFLKMLERQVKAGEFADNAAAKPLVLTLHPQLTKRIDDWKEEQANARGKKPRAYYPIKHGVASELAVSMGAEVLKEKRGVSSEAIALLTIKVVLGNAHRPLKGHNPAVSSQLGKALEDEARFGRIREQEAAYFKKNVADQLDKRVGHVYKKAFMQVVEADMISKGMLGGDNWASWKTDEQMHVGTKLLELLIEGTGLVEMTKNKMADGSDDVTSMQMVQLAPAFVELLSKRAGALAGISPMHQPCVVPPKPWVETVGGGYWSVGRRPLALVRTHSKKALRRYADVHMPEVYKAVNLAQ
type: DOMAIN
name: RPOL_N
description: DNA-directed RNA polymerase, N-terminal

phrase: KPIGLDGFYWLKIHGANCAGVDKVPFPERIKFIEENEGNILASAADPLNNTWWTQQDSPFCFLAFCFEYAGVKHHGLNYNCSLPLAFDGSCSGIQHFSAMLRDSIGGRAVNLLPSDTVQDIYKIVADKVNEVLHQHAVNGSQTVVEQIADKETGEFHEKVTLGESVLAAQWLQYGVTRKVTKRSVMTLAYGSKESLVRQQVLEDTIQPAIDNGEGLMFTHPNQAAGYMAKLIWDAVTVTVVAAVEAMNWLKSAAKLLAAEVKDKKTKEVLRKRCAIHWVTPDGFPVWQEYRKQNQARLKLVFLGQANVKMTYNTGKDSEIDAHKQESGIAPNFVHSQDGSHLRMTVVHANEVYGIDSFALIHDSSGTIPADAGNLFKAVRETMVKTYEDNDVIADFYDQFADQLHES
type: DOMAIN
name: DNA-dir_Rpol_C_phage-type
description: DNA-directed RNA polymerase, C-terminal domain, phage-type

phrase: QLALEHEAYELGRQRFLKMLERQVKAGEFADNAAAKPLVLTLHPQLTKRIDDWKEEQANARGKKPRAYYPIKHGVASELAVSMGAEVLKEKRGVSSEAIALLTIKVVLGNAHRPLKGHNPAVSSQLGKALEDEARFGRIREQEAAYFKKNVADQLDKRVGHVYKKAFMQVVEADMISKGMLGGDNWASWKTDEQMHVGTKLLELLIEGTGLVEMTKNKMADGSDDVTSMQMVQLAPAFVELLSKRAGALAGISPMHQPCVVPPKPWVETVGGGYWSVGRRPLALVRTHSKKALRRYADVHMPEVYKAVN
type: DOMAIN
name: RPOL_N
description: DNA-directed RNA polymerase, N-terminal
Protein sequence:
MPNRLKVAHPRKKTPFSTIEEAIDAIRAGRIVIVIDDEDRENEGDLTVAAAKITPEHINFMARYGRGLICMPMTDERLDELEVPLMVDKNTAAYGTAFCVPIEAKKGTTTGISAGDRAATVRAAINPRTKPSDLARPGHMFPLRARQGGVMVRAGQTEAAVDLARIAGLYPAGVICEIMNDDGTMARVPQLTRFARRHKLPLITIADLIKYRMRTERLVRRVATAELPTGLGAFRLFAYESLLDKETHLALVRGEIGDGTSVMVRVHSRCLTGDVFHSMRCDCGAQLDAAMTRIAAEGRGILLYLNQEGRGIGLANKIRAYELQDQGLDTVEANERLGFKADQRDYGIGAQILGDLGVRTMRLLTNNPRKFVGLEGYGLSVLESIPLEIPVSDTTRRYLKTKKEKLGHKLSLV

Annotated regions:
phrase: RVATAELPTGLGAFRLFAYESLLDKETHLALVRGEIGDGTSVMVRVHSRCLTGDVFHSMRCDCGAQLDAAMTRIAAEGRGILLYLNQEGRGIGLANKIRAYELQDQGLDTVEANERLGFKADQRDYGIGAQILGDLGVRTMRLLTNNPRKFVGLEGYGLSVLESI
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MSTKAKQQSSQQMTRGFEPYQETKGEEYMSERMRAHFTAILNKWKQELMEEVDRTVHHMQDEAANFPDPADRASQEEEFSLELRARDRERKLIKKIDETLQLIEDEEYGWCDSCGVEIGIRRLEARPTATLCIDCKTLAEIREKQLGS

Annotated regions:
phrase: CDSCGVEIGIR
type: DOMAIN
name: Znf_C4-type_bac
description: Zinc finger, DksA/TraR C4-type, bacteria

phrase: LEARPTATLCID
type: DOMAIN
name: Znf_C4-type_bac
description: Zinc finger, DksA/TraR C4-type, bacteria

phrase: EYGWCDSCGVEIGIRRLEARPTATLCIDCKTL
type: DOMAIN
name: Znf_DskA_TraR
description: Zinc finger, DksA/TraR C4-type

phrase: RAHFTAILNKWKQELMEEVDRTVHHMQDEAANFPDPADRASQEEEFSLELRARDRERKLIKKIDETLQL
type: DOMAIN
name: DksA_N
description: DnaK suppressor protein DksA, N-terminal domain

phrase: CDSCGVEIGIRRLEARPTATLCID
type: CONSERVED_SITE
name: Znf_DskA_TraR_CS
description: Zinc finger, DksA/TraR C4-type conserved site
Protein sequence:
MKIQTEVDELGFFGEYGGQYVPETLMPAIIELKKAYEDAKSDTHFKKEFNYYLSEYVGRETPLTFAESYTKLLGGAKIYLKREDLNHTGAHKINNAIGQALLAKRMGKTKLVAETGAGQHGVASATIAALFDMDLIVFMGSEDIKRQQLNVFRMELLGAKVVSVSDGQGTLSDAVNKALQYWVNHVEDTHYLLGSALGPDPFPTMVRDFQSVIGNEIKSQILSKEGRLPDALVACVGGGSNSIGTFYPFIQDDVKLYGVEAAGKGSHTHNHALAIGKGKPGVLHGSKMYLIQNDDGQIELAHSISAGLDYPGIGPEHSYYNDIGRVSYVSATDNEAMEALITFSKVEGIIPAIESAHALSYVEKLAPNMDEKEIIVVTISGRGDKDMETIKQYKENGGEQNE

Annotated regions:
phrase: GRETPLTFAESYTKLLGGAKIYLKREDLNHTGAHKINNAIGQALLAKRMGKTKLVAETGAGQHGVASATIAALFDMDLIVFMGSEDIKRQQLNVFRMELLGAKVVSVSDGQGTLSDAVNKALQYWVNHVEDTHYLLGSALGPDPFPTMVRDFQSVIGNEIKSQILSKEGRLPDALVACVGGGSNSIGTFYPFIQDDVKLYGVEAAGKGSHTHNHALAIGKGKPGVLHGSKMYLIQNDDGQIELAHSISAGLDYPGIGPEHSYYNDIGRVSYVSATDNEAMEALITFSKVEGIIPAIESAHALSYVEKLAPNMDEKEIIVVTIS
type: DOMAIN
name: TrpB-like_PALP
description: Tryptophan synthase beta chain-like, PALP domain

phrase: LNHTGAHKINNAIG
type: CONSERVED_SITE
name: Trp_synth_b_CS
description: Tryptophan synthase, beta chain, conserved site
Protein sequence:
MTHSEYRDEYCGAVTESLIEQTISVVGWVHRRRDHGGVIFLDMRDRAGILQVVVDPDTPEAFAIADAVRPEYVIKITGRVRQRYAGTENANMTSGHIELLAKEIEVLAKSETPPFPLNDEKSTVSEDLRLKYRYLDMRRPQMQDRMVFRAKATSAIRRYLDDHGFLDVETPILTRATPEGARDYLVPSRTRPGNFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQVDIETSFLNEEEIMNINEGLIKHVFKTMMDVEFEQFPRMTYAEAMRDYASDKPDLRIPLKLIDVADLMKDVDFKVFAGPANDPKGRVAALRIPGGASLSRKQIDAYTKFVSIYGARGLAYIKVNDASNINNGVDKESGLQSPIIKNMTDDVLVSLIERTGAESNDIIFFGADKASVVNDAIGALRQKIGLDLEMTTCEWAPLWVTDFPMFEETEDGRWTSMHHPFTKPKGSVEELKTNPESALSIAYDMVLNGTEVGGGSLRINTLEMQTAVFEALGIDDQEAEDKFGFLLDALKFGAPPHGGLAFGLDRLIMLMVGASSIRDVIAFPKTKTAECPLTQAPAEVNTKQLRELGIRVREKVQADTSKSAE

Annotated regions:
phrase: SEDLRLKYRYLDMRRPQMQDRMVFRAKATSAIRRYLDDHGFLDVETPILTRATPEGARDYLVPSRTRPGNFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQVDIETSFLNEEEIMNINEGLIKHVFKTMMDVEFEQFPRMTYAEAMRDYASDKPDLRIPLKLIDVADLMKDVDFKVFAGPANDPKGRVAALRIPGGASLSRKQIDAYTKFVSIYGARGLAYIKVNDASNINNGVDKESGLQSPIIKNMTDDVLVSLIERTGAESNDIIFFGADKASVVNDAIGALRQKIGLDLEMTTCEWAPLWVTDFPMFEETEDGRWTSMHHPFTKPKGSVEELKTNPESALSIAYDMVLNGTEVGGGSLRINTLEMQTAVFEALGIDDQEAEDKFGFLLDALKFGAPPHGGLAFGLDRLIMLMVGASSIRDVIAFPKT
type: DOMAIN
name: Aa-tRNA-synt_II
description: Aminoacyl-tRNA synthetase, class II (D/K/N)

phrase: RDEYCGAVTESLIEQTISVVGWVHRRRDHGGVIFLDMRDRAGILQVVVDPDTPEAFAIADAVRPEYVIKITGRVRQRYAGTENANMTSGHIELLAKEIEVLAKSETPPFPLNDEKSTVSEDLRLKYRYLDMRRPQ
type: DOMAIN
name: Asp-tRNA-ligase_1_N
description: Aspartate-tRNA ligase, type 1, anticodon recognition domain

phrase: FAGPANDPKGRVAALRIPGGASLSRKQIDAYTKFVSIYGARGLAYIKVNDASNINNGVDKESGLQSPIIKNMTDDVLVSLIERTGAESNDIIFFGADKASVVND
type: DOMAIN
name: GAD_dom
description: GAD domain

phrase: SAIRRYLDDHGFLDVETPILTRATPEGARDYLVPSRTRPGNFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQVDIETSFLNEEEIMNINEGLIKHVFKTMMDVEFEQFPRMTYAEAMRDYASDKPDLRIPLKLIDVADLMKDVDFKVFAGPANDPKGRVAALRIPGGASLSRKQIDAYTKFVSIYGARGLAYIKVNDASNINNGVDKESGLQSPIIKNMTDDVLVSLIERTGAESNDIIFFGADKASVVNDAIGALRQKIGLDLEMTTCEWAPLWVTDFPMFEETEDGRWTSMHHPFTKPKGSVEELKTNPESALSIAYDMVLNGTEVGGGSLRINTLEMQTAVFEALGIDDQEAEDKFGFLLDALKFGAPPHGGLAFGLDRLIMLMVGASSIRDVIAF
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: MVFRAKATSAIRRYLDDHGFLDVETPILTRATPEGARDYLVPSRTRPGNFFALPQSPQLFKQLLMVAGFDRYYQIAKCFRDEDLRADRQPEFTQVDIETSFLNEEEIMNINEGLIKHVFKTMMDVEFEQFPRMTYAEAMRDYASDKPDLRIPLKLIDVADLMKDVDFKVFAGPANDPKGRVAALRIPGGASLSRKQIDAYTKFVSIYGARGLAYIKVNDASNINNGVDKESGLQSPIIKNMTDDVLVSLIERTGAESNDIIFFGADKASVVNDAIGALRQKIGLDLEMTTCEWAPLWVTDFPMFEETEDGRWTSMHHPFTKPKGSVEELKTNPESALSIAYDMVLNGTEVGGGSLRINTLEMQTAVFEALGIDDQEAEDKFGFLLDALKFGAPPHGGLAFGLDRLIMLMVGASSIRDVIAFPKT
type: DOMAIN
name: AspRS_core
description: Aspartate-tRNA ligase, type 1, core domain

phrase: ISVVGWVHRRRDHGGVIFLDMRDRAGILQVVVDPDTPEAFAIADAVRPEYVIKITGRVRQRYAGTENANMTSGHIELLAKEIEV
type: DOMAIN
name: NA-bd_OB_tRNA
description: OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
Protein sequence:
MNIHEYQAKAIFADNGILTLKGKVAFSVDEAVSNAKELGGSVWAVKAQIHAGGRGLGGGVKIAKNLDEVKDYASKILGMNLVTHQTGPEGKLVQKLYIESGANIVKEYYLAILFNRMAEQITIIASSEGGMDIEKVAKESPGKIAKVGIDPQIGFKMFHGLEVARVLGLDKDEGKKLISMIAKLYKLYMDKDMNMLEINPLIKTAEGDFYALDAKCSFDDSALYRHPEIAELRDITEENPAEREAAEFGLSYVKLDGDVACMVNGAGLAMATMDIINYSGAKPANFLDVGGGASPETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILEATKNVEVNIPIVVRLDGTNAAEAKTILDNSNLKNIKAATNLKNGAELVKSLVG

Annotated regions:
phrase: MVNGAGLAMATMDIINYSGAKPANFLDVGGGASPETVAKAFEIILRDKNVKVIFINIFGGIVRCDRIANGILEATKNVEVNIPIVVRLDGTNAAEAKTILDNSNLKNIKAATN
type: DOMAIN
name: SUCC_ACL_C
description: ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain

phrase: NIHEYQAKAIFADNGILTLKGKVAFSVDEAVSNAKELGGSVWAVKAQIHAGGRGLGGGVKIAKNLDEVKDYASKILGMNLVTHQTGPEGKLVQKLYIESGANIVKEYYLAILFNRMAEQITIIASSEGGMDIEKVAKESPGKIAKVGIDPQIGFKMFHGLEVARVLGLDKDEGKKLISMIAKLYKLYMDKDMNMLEINPL
type: DOMAIN
name: ATP-grasp_succ-CoA_synth-type
description: ATP-grasp fold, succinyl-CoA synthetase-type

phrase: GDVACMVNGAGLAMATMDIINYSG
type: CONSERVED_SITE
name: Succ-CoA_synthase_bsu_CS
description: Succinyl-CoA synthetase, beta subunit, conserved site
Protein sequence:
MSNAITMGIFWHLIGAASAACFYAPFKQVKQWSWETMWSVGGIVSWLILPWTISALLLPDFWAYYGQFNLSTLLPVFLFGAMWGIGNINYGLTMRYLGMSMGIGIAIGITLIVGTLMTPIINGNFDVLIHTEGGRMTLLGVFVALIGVGIVTRAGQLKERKMGIKAEEFNLKKGLLLAVMCGIFSAGMSFAMNAAKPMHEAAAALGVDPLYVALPSYVVIMGGGALVNLGFCFIRLAKVQNLSIKADFSLARPLIISNILLSALGGLMWYLQFFFYAWGHARIPAQYDYMSWMLHMSFYVLCGGLVGLVLKEWKNAGRRPVAVLSLGCVVIIIAANIVGLGMAS

Annotated regions:
Protein sequence:
MTRTITPSITDDDALIEATLRPRALDDYVGQEKAKGNLRIFIDAARGRDEALDHVLLYGPPGLGKTTLANIIACEMGVNIKSTSGPVIERPGDLAAILTNLEAHDVLFIDEIHRLSHVVEEILYPAMEDFQLDIIIGQGPSARTIKLDLPKFTLVGATTRAGLLSSPLRDRFGVISRLEFYTDEELAFIITRSARILGMEIKTDGAAEMARRSRGTPRIANRLLRRVRDFAQVKADGVITMKVVQDALALLEIDEMGFDQMDRMILLTIIDKFGGGPVGLDTIAAAISEESDTIEDVYEPFLIQNGFLNRTPRGRVATKAAYLHFGRIVPEPPQGKLF

Annotated regions:
phrase: LRPRALDDYVGQEKAKGNLRIFIDAARGRDEALDHVLLYGPPGLGKTTLANIIACEMGVNIKSTSGPVIERPGDLAAILTNLEAHDVLFIDEIHRLSHVVEEILYPAMEDFQLDIIIGQGPSARTIKLDLPKFTLVGATTRAGLLSSPLRDRFGVISR
type: DOMAIN
name: RuvB-like_N
description: RuvB-like P-loop domain

phrase: EMGFDQMDRMILLTIIDKFGGGPVGLDTIAAAISEESDTIEDVYEPFLIQNGFLNRTPRGRVATKAAYLH
type: DOMAIN
name: RuvB_C
description: RuvB C-terminal winged helix domain

phrase: ALDHVLLYGPPGLGKTTLANIIACEMGVNIKSTSGPVIERPGDLAAILTNLEAHDVLFIDEIHRLSHVVEEILYPAMEDFQLDIIIGQGPSARTIKLDLPKFTLVGATTRAGLLSSPLRDRFGVISRLEFY
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: YTDEELAFIITRSARILGMEIKTDGAAEMARRSRGTPRIANRLLRRVRDFAQVKADGVITMKVVQDALALLEI
type: DOMAIN
name: AAA_lid_4
description: RuvB, AAA lid domain
Protein sequence:
MQTLEQLTSPEHSAWITLSQWIDNARNHCEVIKKDQSSAERELFTMQMPTSSPMGAVIYETGGILIHYGWLRILGSGSFKLPRGLMDWNFSKSFSESGEKPKYLLVADDVIGGYFALNGGSLGNNIGKIYYYSSKDLTWHNLNFTYTEFLAWVLNGDVEAFYQGLFWKNWQDDVKQLDGNQVFVFTPDLNQDRKIAIDERQKQEVNIETHYQANFAEKNKFDLAYSVA

Annotated regions:
Protein sequence:
MKLEDLLKDIEIILLSGPKDVEIKGLEYDSRNVKEGDLLVCINGANVNGHKFIESAKAKGAVAFVIEEDVQKDDNLTYIKVRSTNEVISSLGRNFYKNPSEKIQLIGITGTNGKTSVASFLKDILSQDEKCGFIGTIGIFDGKNNYLNKNTTPNNIEIQRSLNSMINNDCKYCTMEVSSHALALKRVENMKYKIGIFTNLTEDHLDFHKTFENYRKAKESLFYMTTSANIINIDDINGRIILDNIKTLGVPYYTYGINYDATFRAKDVKLYEDKTVFTLHGPNNFQREVALNMVGQFTVYNCLAAICACYILNMDVDEIVNRISILKGVNGRFEKVENNKNIHVFVDYAHTPDALDNVLNSIKAFARKRIITVFGCGGNREKEKRPLMGKIAQEYSDIAIITSDNPRYEEPNEIIKDILIGINKEKENYVVIVDRKDAIKEAISRAKEGDVVLIAGKGHENYQIIKDEIVEFDDKLVAKEILDSLGE

Annotated regions:
phrase: ITGTNGKTSVASFLKDILSQDEKCGFIGTIGIFDGKNNYLNKNTTPNNIEIQRSLNSMINNDCKYCTMEVSSHALALKRVENMKYKIGIFTNLTEDHLDFHKTFENYRKAKESLFYMTTSANIINIDDINGRIILDNIKTLGVPYYTYGINYDATFRAKDVKLYEDKTVFTLHGPNNFQREVALNMVGQFTVYNCLAAICA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: EIKGLEYDSRNVKEGDLLVCINGANVNGHKFIESAKAKGAVAFVIEEDVQKDDNLTYIKVRSTNEVISSLGRN
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: GRFEKVENNKNIHVFVDYAHTPDALDNVLNSIKAFARKRIITVFGCGGNREKEKRPLMGKIAQEYSDIAIITSDNPRYEEPNEIIKDILIGINKEKENYVVIVDRKDAIKEAISRAKEGDVVLIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MVPAPHTQHSPSSTMLNSSSTTAHAAPSTNGDVHAPKDHHLSSPSDTVSAPVNRKKQKRRQKQAARLAERQLANGHVSTDDTTQNGSSHANPERYHSDDGGADGPDHEQPTNGDVYDKDGQDSMDAHVDSQNPQGPNGTESSQKSTGRKSKKKKGKKARNNSHAQGDETSTPMSTPSVSMSHPLPPPLPSHLASHNILKPAKNRSIWNTSTQEERENIKTFWLELGEEERRQLVKVEKDAVLKKMKEQQRHSCSCTVCGRKRTAIEEELEVLYDAYYEELEQYANHNQGSFEKGSPMVPPPRLYQPPLRSPGQHTRTQGQFHPSRGRIHELTEEDDDLEEDYDEEEDDGDEPYSDEELDEEDEETRAARADFFAFGNSLTVKVADDLLKNDGKHFIDMMEQLAERRMQREEDTQYGIAAAHESLHSGHNHGPFDDEDYDDEEDEDYDSQEEEDYEEDEMDAMTEEQRMEEGRRMFQIFAARMFEQRVLTAYREKVAEQRQQKLIEELMEEETRNEQRNAKKAREAQKRKDKKRLQKQAKEEERARREAEKAAEEAAAKAEQEKKLEEQRKKREEQRKKKEAERKAQEEERARKEAEKLRRQREERERQAEAERKQREEKKRREEARRKEKEERELREKKAKEERDRKAQEEQAKKDTAKGGEEAKDQEKRDDQAKRSSQQGPVPIPSNLHHLQGFSPAVAHSPHVPSATPVLPKAPTPARPRQPSQQDSHSSSPHSQAPSTDPSQASLSPRSMPVSQSSGVASGNSQQGHGLHAMLHQPQPSTPLSPLGRSIPPGFSSVNGIPPNPPGLSGMVARPPVGHDLPSYPPHSGPFISPFRGYPAPSGIPAPPGINGARPMPPGRGFPLEPGQGFAFHGQQIPGAFSTPQGGLPHRHSRQPSGSLERSPLENHAQPMPISRPSPIKRPSSTQQDQQKGGDRTTQRDVDDLSAHLGSSALLDDTDVPLSSTLSQSLPGATAPGTFPGPARASFGGPSLFPDPLSASKHANFAVSPAVSGGTWGAQIPFGTSAFPSAQTWGTGHASGWSNNAFGSGGHHRAHTSRPVAIRLLVIQACKQLNTMSPFKGADGYHDVNLVLRQVEQLRPQNEPSISLKEMLDICDTEGNTQNGGGTFSIKKDETREFVKFEPDNNSAASGHRGSIVPGEIGSPVPSSSLPAFGGIGTPSVLRQYSSPPMGF

Annotated regions:
Protein sequence:
MNYLTILLCNRKPTMLSRRNKEKSQHKEGVVGKYMKKDTPPDISVINVWSDQRAKKKSLQRCASTSPSCEFHPRSSSTSRNTYSCTDSQPDYYHARRAQSQMPLQQHSHSHPHSLPHPSHPHVRSHPPLPPHQFRASSNQLSQNSSNYVNFEQIERMRRQQSSPLLQTTSSPAPGAGGFQRSYSTTQRQHHPHLGGDSYDADQGLLSASYANMLQLPQRPHSPAHYAVPPQQQQHPQIHQQHASTPFGSTLRFDRAAMSIRERQPRYQPTSSPMQQQQQQQQQQQQQLQHTQLAAHLGGSYSSDSYPIYENPSRVISMRATQSQRSESPIYSNTTASSATLAVVPQHHHQGHLAVPSGSGGGSLSGSGRGGSSGSVRGASTSVQSLYVPPRTPPSAVAGAGGSANGSLQKVPSQQSLTEPEELPLPPGWATQYTLHGRKYYIDHNAHTTHWNHPLEREGLPVGWRRVVSKMHGTYYENQYTGQSQRQHPCLTSYYVYTTSAEPPKAIRPEASLYAPPTHTHNALVPANPYLLEEIPKWLAVYSEADSSKDHLLQFNMFSLPELEGFDSMLVRLFKQELGTIVGFYERYRRALILEKNRRAGQNQNQNQ

Annotated regions:
phrase: PPGWATQYTLHGRKYYIDHNAHTTHWNHPL
type: DOMAIN
name: WW_dom
description: WW domain

phrase: EGLPVGWRRVVSKMHGTYYENQYTGQSQRQHPC
type: DOMAIN
name: WW_dom
description: WW domain

phrase: LPPGWATQYTLHGRKYYIDHNAHTTHWNH
type: DOMAIN
name: WW_dom
description: WW domain

phrase: GLPVGWRRVVSKMHGTYYENQYTGQSQRQHPC
type: DOMAIN
name: WW_dom
description: WW domain

phrase: PLPPGWATQYTLHGRKYYIDHNAHTTHWNHPL
type: DOMAIN
name: WW_dom
description: WW domain

phrase: LPLPPGWATQYTLHGRKYYIDHNAHTTHWNHPL
type: DOMAIN
name: WW_dom
description: WW domain

phrase: LLQFNMFSLPELEGFDSMLVRLFKQELGTIVGFYERYRRALILEKNR
type: DOMAIN
name: SARAH_dom
description: SARAH domain
Protein sequence:
MNIDIVISADHIDEKRLIKKTVIIIDILRATSVITTAINNGCKKVIPVLTVEEAKDIAKNSKEDIILGGERNALKIDGFNFSNSPLEYTKKYVEGKTVVLSTTNGTRAINNSFNAKTILISALINSKATAKAIDKLNEDLIIINSGTNGQFSIDDFICSGYLIDCLYNIRKDLELSDIAKTAHYIYTNNKDIESFVKKATHYSRLKSLNLEKDLEYCFQKDIIGVVPQYKDGYIIKSNI

Annotated regions:
Protein sequence:
MEACCCSSSSVPSASILATGAGLRRRFSPAGAGGGGRAVAVAAGRPIRASAALLAAPAPRRRGGVVVRAVFERFTERAVKAVVFSQREARGMGDETVAPHHLLLGLVAEDRSPLGFLASGVRVERAREACRAAVGKEGLAQAPVGLATDVPFSGASKRVFEAAVEFSRNMGCNFISPEHIALGLFNLNDPTTNNVLKSLGVDSSQLAKQALTRVQGELAKDGREPVGLSSFKVREKFTPGGGKSAIVKYSNKNKEKSALALFCLDLTMRASGGLIDPVIGRKDEIERVVQIICRRTKNNPILLGEAGVGKTAIAEGLAHKIANGDVPIFLVGKRILSLDVALLMAGAKERGELEARVTSLIREVRKAGDVILFIDEVHTLIGSGIAGRGSKGAGLDIANLLKPALARGELQCIASTTLDEHRLHFDKDKALARRFQPVLVNEPSQEDAVKILLGLREKYETYHKCKYTLESINAAVYLSARYIADRHLPDKAIDLIDEAGSRARMESFKRKKEEQCSILSKSPDEYWQEIRAVQNMHEVALTNKVKYSLNQNDQEDAVDIELVGEDKTSPASMLSTSTDKPSLVGSEEIARVTSLWSGIPVQQLTADERKLLVGLDDELRKRVIGQDDAVLAISKAVKRSRVGLNDPDRPIATLIFCGPTGVGKTELTKALAASYFGSESATVRLDMSEYMERHAVSKLIGSPPGYMGFGEGGTLTEAVRRKPFTVVLLDEIEKAHPDIFNILLQIFEDGHLTDSQGRRVSFKNTLIVMTSNVGSTSISNGKRSIGFQTQTDTEEKSYAAMKSLVMEELKAFFRPELLNRIDEVVVFHPLEKTQMLAILNIMLQEVKGRILALGIGLEVSDSMKDLISQHGYDKSYGARPLRRAVTQLVEDVISEAILSGQFKPGDTIMVDTDATGKPCLSRLNDQTVQLSDPTPTL

Annotated regions:
phrase: FERFTERAVKAVVFSQREARGMGDETVAPHHLLLGLVAEDRSPLGFLASGVRVERAREACRAAVGKEGLAQAPVGLATDVPFSGASKRVFEAAVEFSRNMGCNFISPEHIALGLFNLNDPTTNNVLKSLGVDSSQLAKQALTRVQG
type: DOMAIN
name: Clp_R_dom
description: Clp, repeat (R) domain

phrase: DIANLLKPALAR
type: CONSERVED_SITE
name: ClpA/B_CS1
description: ClpA/B, conserved site 1

phrase: RLDMSEYMERHAVSKLIG
type: CONSERVED_SITE
name: ClpA/B_CS2
description: ClpA/B, conserved site 2

phrase: LEKTQMLAILNIMLQEVKGRILALGIGLEVSDSMKDLISQHGYDKSYGARPLRRAVTQLVEDVISEAILSGQFKPGDTIM
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal

phrase: TKNNPILLGEAGVGKTAIAEGLAHKIANGDVPIFLVGKRILSLDVALLMAGAKERGELEARVTSLIREVRKAGDVILFIDEVHTLIGSGIAGRGSKGAGLDIANLLKPALARGELQCIASTTLDEHRLHFDKDKALARRFQPVLVNEPS
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: PIATLIFCGPTGVGKTELTKALAASYFGSESATVRLDMSEYMERHAVSKLIGSPPGYMGFGEGGTLTEAVRRKPFTVVLLDEIEKAHPDIFNILLQIFEDGHLTDSQGRRVSFKNTLIVMTSNVGSTSISNGKRSIGFQTQTDTEEKSYAAMKSLVMEELKAFFRPELLNRIDEVVVFHPL
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LEKTQMLAILNIMLQEVKGRILALGIGLEVSDSMKDLISQHGYDKSYGARPLRRAVTQLVEDVISEAILSGQFKPGDTIMVDTDATGKPC
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal

phrase: RPIATLIFCGPTGVGKTELTKALAASYFGSESATVRLDMSEYMERHAVSKLIGSPPGYMGFGEGGTLTEAVRRKPFTVVLLDEIEKAHPDIFNILLQIFEDGHLTDSQGRRVSFKNTLIVMTSNVGSTSISNGKRSIGFQTQTDTEEKSYAAMKSLVMEELKAFFRPELLNRIDE
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: ILLGEAGVGKTAIAEGLAHKIANGDVPIFLVGKRILSLDVALLMAGAKERGELEARVTSLIREVRKAGDVILFIDEVHTLIGSGIAGRGSKGAGLDIANLLKPALARGELQCIAST
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: SQREARGMGDETVAPHHLLLGLVAEDRSPLGFLASGVRVERARE
type: DOMAIN
name: Clp_R_dom
description: Clp, repeat (R) domain

phrase: AVEFSRNMGCNFISPEHIALGLFNLNDPTTNNVLKSLGVDSSQLAKQ
type: DOMAIN
name: Clp_R_dom
description: Clp, repeat (R) domain

phrase: SQEDAVKILLGLREKYETYHKCKYTLESINAAVYLSARYIADRHLPDKAIDLIDEAGSRARMESFKRKKEEQCSILSKSPDEYWQEIRAVQNMH
type: DOMAIN
name: ClpA/ClpB_AAA_lid
description: ClpA/ClpB, AAA lid domain
Protein sequence:
MKNTYNLRSITAKAINQVLDQGQSLSTVLPKLQQNITDKDKPLLQELSFGVLRVLPQLEWIIGQLMVKPLKGKQRILHYLLMVGIYQLAYTRIPAHAALAETVNGAVTLKHSQLKGLINGVLRQFQRQQLQLMECTQNNSSHHLHPEWLLTRIQKAYPQQWQQLINANNKKPPMWLRVNRIYHSRDEYLTLLRKSGIDAEPAPKSPSAIRIISPCPVTILPGFDKGWVTVQDLSAQECVELLKPINGEKILDLCAAPGGKTTYILEIAPESQVVAVDIDEQRIKRVKENLKRLNCHATVKTGDGRHPEHWAENQQFDRILLDAPCSATGVIRRHPDIKWLRREEDIAQLVQLQSEILDAIWPYLKKSGTLVYATCSILPDENCQQISSFLKRHSDAKLAGTETNDCLGKQIIPELNGGDGFFYARLTKR

Annotated regions:
phrase: LINANNKKPPMWLRVNRIYHSRDEYLTLLRKSGIDAEPAPKSPSAIRIISPCPVTILPGFDKGWVTVQDLSAQECVELLKPINGEKILDLCAAPGGKTTYILEIAPESQVVAVDIDEQRIKRVKENLKRLNCHATVKTGDGRHPEHWAENQQFDRILLDAPCSATGVIRRHPDIKWLRREEDIAQLVQLQSEILDAIWPYLKKSGTLVYATCSILPDENCQQISSFLKRHSDAKLAGTETNDCLGKQIIPELNGGDGFFYARLTK
type: DOMAIN
name: MeTrfase_RsmB-F_NOP2_dom
description: SAM-dependent methyltransferase RsmB-F/NOP2-type domain

phrase: FDRILLDAPCS
type: CONSERVED_SITE
name: RsmB/NOL1/NOP2-like_CS
description: RsmB/NOL1/NOP2-like, conserved site

phrase: NLRSITAKAINQVLDQGQSLSTVLPKLQQNITDKDKPLLQELSFGVLRVLPQLEWIIGQLMVKPLKGKQRILHYLLMVGIYQLAYTRIPAHAALAETVNGAVTLKHSQLKGLINGV
type: DOMAIN
name: RsmB-like_N
description: Ribosomal RNA small subunit methyltransferase B-like, N-terminal domain

phrase: HPEWLLTRIQKAYPQQWQQLINANNKKPPMWLRVNRIYHSRDEYLTLLRKSGIDAEPAPKSPSAIRIISPCPV
type: DOMAIN
name: RsmB-like_ferredoxin
description: Ribosomal RNA small subunit methyltransferase B-like, ferredoxin-like domain

phrase: LRSITAKAINQVLDQGQSLSTVLPKLQQNITDKDKPLLQELSFGVLRVLPQLEWIIGQLMVKPLKGKQRILHYLLMVGIYQLAYTRIPAHAALAETVNGAVTLKHSQLKGLINGVLRQFQ
type: DOMAIN
name: NusB_RsmB_TIM44
description: NusB/RsmB/TIM44

phrase: LLKPINGEKILDLCAAPGGKTTYILEIAPESQVVAVDIDEQRIKRVKENLKRLNCHATVKTGDGRHPEHWAENQQFDRILLDAPCSATGVIRRHPDIKWLRREEDIAQLVQLQSEILDAIWPYLKKSGTLVYATCSILPDENCQQISSFLKRHSDAKLAGTETNDCLGKQIIPELNGGDGFFYAR
type: DOMAIN
name: MeTrfase_RsmB-F_NOP2_cat
description: SAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic core
Protein sequence:
MHLNKLSLFNYKNFSEAGFDFDIKINCFVGKNGIGKTNVLDAIYHLAYGKSYFNPLAVQNIKHGEEFFVIDAELEKNDRTEQIVCSLKKGQKKVLKRNGKAYDKFSDHIGFIPLVIISPADRDLIVEGSETRRKFMDSVISQLDSTYLHQLIQYQKVIVQRNALLKYFALNHTFDNDTLSIYNEQLNEFGKSIFEKRKEFLEEFIPIFNVHHQAITGSEESVQLVYESHLFEKDLLTLLQENINKDRALHYTSSGIHKDDLSFEIDSHPIKKFGSQGQQKSFLIALKLAQFEFLKKQSGVKPILLFDDIFDKLDETRVAKIVEMVNSETFGQLFISDTHPERTEAIVKSTHQTYKIFNL

Annotated regions:
phrase: ISPADRDLIVEGSETRRKFM
type: CONSERVED_SITE
name: DNA-binding_RecF_CS
description: DNA-binding, RecF, conserved site

phrase: LNKLSLFNYKNFSEAGFDFDIKINCFVGKNGIGKTNVLDAIYHLAYGKSYFNPLAVQNIKHGEEFFVIDAELEKNDRTEQIVCSLKKGQKKVLKRNGKAYDKFSDHIGFIPLVIISPADRDLIVEGSETRRKFMDSVISQLDSTYLHQLIQYQKVIVQRNALLKYFALNHTFDNDTLSIYNEQLNEFGKSIFEKRKEFLEEFIPIFNVHHQAITGSEESVQLVYESHLFEKDLLTLLQENINKDRALHYTSSGIHKDDLSFEIDSHPIKKFGSQGQQKSFLIALKLAQFEFLKKQSGVKPILLFDDIFDKLDETRVAKIVEMVNSETFGQLFISDTHPER
type: DOMAIN
name: RecF/RecN/SMC_N
description: RecF/RecN/SMC, N-terminal
Protein sequence:
MDTLFVEEVAASLIREFLSRKGLKKTYVTMDQERPRSDLSINSRNDLRKVLHLEFLYKENKAKENPLKTNLELITRYFLDHFGNIGNNVTQETRIPELSVPKKSNKLPLRSSETTLVNIYHLADEDETWRTSLSEISKARHDSLDGDVLGHFVSSKRSSHKSRPIKTVAGESPTVASAWEKTDKLPMSEPSLDTKRMGEKVRPKSGLIVRGMMAGPIASSPQDSLRKRSLRRSPALSSATQPHKEGSPQEPELSTHTSTCPTPLEGPASSTASTSRSPQGPLSELTWEKQRTSPGSPPHLPGKGLLPRGSGRWRDLSEDSPAVDSGSEAIRTPPKFSLSSGNVPKTQERPERAFERQGSQPASLRKNQLSVSNKLEGDLDVLQLEDVEDELVREEIILSPVSSVLKLQVVSKPIDLSVAKDIKTILFGSSFCCFSDEWKLQSFSFNDSVSLKYGIVQNKGGPCGVLAAVQGCVLQKLLFEGDSSADCARLQPSNARRTHCLALAIADIVWRAGGCERAVVTLASGTQHFSPTGKYKADGVLETLILHSLTCYEELVTFLQQSIHQFEAGPYGCVLLTLSAILSRSTELVRQDFDVPTSHLIGAHGYCTQELVNLLLTGKAVSNVFNDVVELDSGNGDVTLLKGISTRSDIGFLSLFEHYNVCQVGCFLKTPRFPIWVVCSESHFSVLFSQQLELLRDWRAERLFDLYYYDGLANQQEQIRLTVDTTQTVPEDRDNGLVPPLELCNRTKWKGASVNWNGSEPIL

Annotated regions:
phrase: KTILFGSSFCCFSDEWKLQSFSFNDSVSLKYGIVQNKGGPCGVLAAVQGCVLQKLLFEGDSSADCARLQPSNARRTHCLALAIADIVWRAGGCERAVVTLASGTQHFSPTGKYKADGVLETLILHSLTCYEELVTFLQQSIHQFEAGPYGCVLLTLSAILSRSTELVRQDFDVPTSHLIGAHGYCTQELVNLLLTGKAVSNVFNDVVELDSGNGDVTLLKGISTRSDIGFLSLFEHYNVCQVGCFLKTPRFPIWVVCSESHFSVLFSQQLELLRDWRAERLFDLYYYDGLANQQEQIRLTVDTTQTVPEDRDNGLVPPLELCNRTKWKGASVNWN
type: DOMAIN
name: MINDY-3/4_CD
description: Deubiquitinating enzyme MINDY-3/4, conserved domain

phrase: KTILFGSSFCCFSDEWKLQSFSFNDSVSLKYGIVQNKGGPCGVLAAVQGCVLQKLLFEGDSSADCARLQPSNARRTHCLALAIADIVWRAGGCERAVVTLASGTQHFSPTGKYKADGVLETLILHSLTCYEELVTFLQQSIHQFEAGPYGCVLLTLSAILSRSTELVRQDFDVPTSHLIGAHGYCTQELVNLLLTGKAVSNVFNDVVELDSGNGDVTLLKGISTRSDIGFLSLFEHYNVCQVGCFLKTPRFPIWVVCSESHFSVLFSQQLELLRDWRAERLFDLYYYDGLANQQEQIRLTVDTTQTVPEDRDNGLVPPLELCNRTKWKGASVNWN
type: DOMAIN
name: MINDY-3/4_CD
description: Deubiquitinating enzyme MINDY-3/4, conserved domain
Protein sequence:
MNTELFGVISIFIVSIVLAIPLGRYIAKIYSNDKTLLDPIFNPIEKFIFKISGINATEVMNWKQHLKALLSINMVWFFLCFFILLFQGSLFLNPDNNPSMPPDLAFNTAISFLVNCNLQHYSGESGVSYLSQLFLMFLQFVSAGVGMAAAAMVFTAMKERTTDKLGNFYNFFIKSCTRILLPLSVIVAVALLFSGTPMTFEGKDTITTLQGDTVEISRGPAAAFIAIKHIGTNGGGFFGANSAHPLENPTYFTNAVELWAQLIIPFAMIFALGFYLKKRKFSYVIFGVMTVGFLLLVIPTVISELNGNPAIERMGITQATGAMEGKEVRFGPAVTGFWSIATTVISTGSVNSMHDSSMPVSGSMELLAMMINAFYGGCGVGILNFYIFIILAVFISGLMVGRTPEFLGKKIEAREVKIAAFIAILHPLLILSGTALASYFAANDTAMGYWFSGNATGWLNNPGHHGFSEMLYEYTSSAANNGSGFEGLADNNPFWNITTGIVLLLSRFLPIIGPLAIAGLLANKKYIPESAGTLKTDTTIFGVMVFAVIAIIAALSFFPALALGPLAEYFTLK

Annotated regions:
Protein sequence:
MRHDHLLSAKQLSRGDIEGVLDRAAEIAADPDAVAEKHSDKLLGLLFFEPSTRTKMSFDTAMKRLGGDTVDMGSVDSSSVKKGESLADTVRVIEGYTDAIVLRHPSEGSPKLASEFVDVPVINAGDGAGQHPTQTLLDMYTIRENAGLDDLTIGIMGDLKYGRTVHSLAHALTNFDVSQHFISPESLQLPRSVRYDLHESGAQVREHTDIESVLETLDVLYVTRIQRERFPDENEYRQVAGEYRIDADLLESAKDDLTVMHPLPRVSEIAADVDETEHATYFKQAHNGVPVRMALLDEML

Annotated regions:
phrase: DLTIGIMGDLKYGRTVHSLAHALTNFDVSQHFISPESLQLPRSVRYDLHESGAQVREHTDIESVLETLDVLYVTRIQRERFPDENEYRQVAGEYRIDADLLESAKDDLTVMHPLPRVSEIAADVDETEHATYFKQAHNGVPVRMALL
type: DOMAIN
name: Asp_carbamoyltransf_Asp/Orn-bd
description: Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain

phrase: HLLSAKQLSRGDIEGVLDRAAEIAADPDAVAEKHSDKLLGLLFFEPSTRTKMSFDTAMKRLGGDTVDMGSVDSSSVKKGESLADTVRVIEGYTDAIVLRHPSEGSPKLASEFVDVPVINAGDGAGQHPTQTLLDMYTIR
type: DOMAIN
name: Asp/Orn_carbamoyltranf_P-bd
description: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding