nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSSLPRTFPLLSCEQARAFEQALFKGDSQREWEAMQRAGKALAAAVERDFLELAEWPEDPRLLVLAGKGHNAGDALIAVRHLVEERPDSHVTILWASDPNEARPHVQQARGELGRCRVAKLEEVVWTTEGALSSPEPEYDVVFDGLLGMNFTPPLRSPYDKMIEWANHRDRHFGMRVAVDLPSGVGDAEAPGAFRADFTYAMGLPKAPIEDERNGEWVGRPELLDLGFLNAGVELPEVQACWLDKRDALRQLQHLRPADSHKYTYGQVAVIAGSPQYPGAALMCMGGALRVGPGLVTGIVPHMLSSRLALALPEVTWMPVAARPDGSLEVEAVRAAHMMASNRTKCIVMGPGLVADRNALFNITRIVREITLPLVLDASALTPEVVPAVLGRHPQAGPVILTPHPGELKRLLDRREDGFDPQQVSDFCARHRVILVLKGRITRIFDGESMIATAAGGPVLARGGTGDVLAGMIGGLVAQDPGNCRAAILRAVAWHGAAGDALATRFGQASPRTTELIDYLPMVLRERIRRV

Annotated regions:
phrase: KRDALRQLQHLRPADSHKYTYGQVAVIAGSPQYPGAALMCMGGALRVGPGLVTGIVPHMLSSRLALALPEVTWMPVAARPDGSLEVEAVRAAHMMASNRTKCIVMGPGLVADRNALFNITRIVREITLPLVLDASALTPEVVPAVLGRHPQAGPVILTPHPGELKRLLDRREDGFDPQQVSDFCARHRVILVLKGRITRIFDGESMIATAAGGPVLARGGTGDVLAGMIGGLVAQDPGNCRAAILRAVAWHGAAGDALATRFGQASPRTTELIDYLPMVLRERI
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: KRDALRQLQHLRPADSHKYTYGQVAVIAGSPQYPGAALMCMGGALRVGPGLVTGIVPHMLSSRLALALPEVTWMPVAARPDGSLEVEAVRAAHMMASNRTKCIVMGPGLVADRNALFNITRIVREITLPLVLDASALTPEVVPAVLGRHPQAGPVILTPHPGELKRLLDRREDGFDPQQVSDFCARHRVILVLKGRITRIFDGESMIATAAGGPVLARGGTGDVLAGMIGGLVAQDPGNCRAAILRAVAWHGAAGDALATRFGQASPRTTELIDYLPMVLRE
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: MQRAGKALAAAVERDFLELAEWPEDPRLLVLAGKGHNAGDALIAVRHLVEERPDSHVTILWASDPNEARPHVQQARGELGRCRVAKLEEVVWTTEGALSSPEPEYDVVFDGLLGMNFTPPLRSPYDKMIEWANHRDRHFGMRVAVDLPSGVGDAEAPGAFRADFTYAMGLP
type: DOMAIN
name: YjeF_N_dom
description: YjeF N-terminal domain

phrase: ADSHKYTYGQVAVIAGSPQYPGAALMCMGGALRVGPGLVTGIVPHMLSSRLALALPEVTWMPVAARPDGSLEVEAVRAAHMMASNRTKCIVMGPGLVADRNALFNITRIVREITLPLVLDASALTPEVVPAVLGRHPQAGPVILTPHPGELKRLLDRREDGFDPQQVSDFCARHRVILVLKGRITRIFDGESMIATAAGGPVLARGGTGDVLAGMIGGLVAQDPGNCRAAILRAVAWHGAAGDALATRFGQASPRTTELIDY
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: GGTGDVLAGM
type: CONSERVED_SITE
name: Carbohydrate_kinase_pred_CS
description: Carbohydrate kinase, predicted, conserved site

phrase: VAVIAGSPQYPGAALMCMGGALRVGPGLVTGIVPHMLSSRLALALPEVTWMPVAARPDGSLEVEAVRAAHMMASNRTKCIVMGPGLVADRNALFNITRIVREITLPLVLDASALTPEVVPAVLGRHPQAGPVILTPHPGELKRLLDRREDGFDPQQVSDFCARHRVILVLKGRITRIFDGESMIATAAGGPVLARGGTGDVLAGMIGGLVAQDPGNCRAAILRAVAWHGAAGDALATRFGQASPRTTELIDYL
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: LRQLQHLRPADSHKYTYGQVAVIAGSPQYPGAALMCMGGALRVGPGLVTGIVPHMLSSRLALALPEVTWMPVAARPDGSLEVEAVRAAHMMASNRTKCIVMGPGLVADRNALFNITRIVREITLPLVLDASALTPEVVPAVLGRHPQAGPVILTPHPGELKRLLDRREDGFDPQQVSDFCARHRVILVLKGRITRIFDGESMIATAAGGPVLARGGTGDVLAGMIGGLVAQDPGNCRAAILRAVAWHGAAGDALATRFGQASPRTTELIDYLPMVL
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: ARAFEQALFKGDSQREWEAMQRAGKALAAAVERDFLELAEWPEDPRLLVLAGKGHNAGDALIAVRHLVEERPDSHVTILWASDPNEARPHVQQARGELGRCRVAKLEEVVWTTEGALSSPEPEYDVVFDGLLGMNFTPPLRSPYDKMIEWANHRDRHFGMRVAVDLPSGVGDAEAPGAFRADFTYAMGLPKAPIEDERNGEWVGRPELLDLGFLNAGV
type: DOMAIN
name: YjeF_N_dom
description: YjeF N-terminal domain
Protein sequence:
MRKRISAIIMTLFMVLVSCNSGGVAEDPQSKFLKSAIDLGNDFLNVFTSFGDIVSKVLGFSTETKKSDVGAYFKTIQDTIQGTKDKLNKIVTDMKREGNPNASATETAVKTLIDNTLDKIIEGSKTVSDAIGDASDPIANVGANNAAGVAGTGIESLTKGIKAIVDVVLGKEGNAEAGTDKKAEDLSARTAAGNGEAGKLFAANAGDDANAKKVAADAAKAVGAVTGADILQAMVKNGANAAADAAKANAKDGTIAGAIALTVMAKGGKFAGPTADSADYVTVAKGAAVSAITKALDTLTIAIRKTIDAGLKTVKEAMKINANDTPISPEQNTPKATTNN

Annotated regions:
Protein sequence:
MDVTWTVKYITEFVGTALLIIMGNGAVANVELKGTKAHAQSWMIIGWGYGLGVMLPAVAFGNITSQINPAFTLGLAASGLFPWAHVAQYIIAQVLGAMFGQLLIVMVYRPYYLKTQNPNAILGTFSTIDNVDDNDKKTRLGATINGFLNEFVGSFVLFFGAVAATNIFFGSQSITWMTNYLKGQGADVSSSDIMNQIWVQASGASASKMVAHLFLGFLVMGLVVALGGPTGPGLNPARDFGPRLVHSLLPKSVLGEAKGSSKWWYAWVPVLAPILASLAAVALFKMIYL

Annotated regions:
phrase: QINPAFTL
type: CONSERVED_SITE
name: MIP_CS
description: Major intrinsic protein, conserved site
Protein sequence:
MSTRTVKVGGIDIANDRPFVLFGGMNVLESRDLALQVAESYVKVTQKLGIPYVFKASFDKANRSSINSYRGPGLDEGLRIFEEIKRTFNVPVITDIHEPHQAQPVAEVADIIQLPAFLSRQTDLVAAMARTGCPVNIKKAQFLAPQEMKHILSKCEEAGNDQLILCERGSSFGYNNLVVDMLGFGIMKQFGYPVFFDVTHSLQMPGGLSSSAGGRREQVVQLARSGMAVGLAGLFLEAHPDPDVAKCDGPCALRLSQLEPFLAQMKALDDMVKQFPNIDTA

Annotated regions:
phrase: GIDIANDRPFVLFGGMNVLESRDLALQVAESYVKVTQKLGIPYVFKASFDKANRSSINSYRGPGLDEGLRIFEEIKRTFNVPVITDIHEPHQAQPVAEVADIIQLPAFLSRQTDLVAAMARTGCPVNIKKAQFLAPQEMKHILSKCEEAGNDQLILCERGSSFGYNNLVVDMLGFGIMKQFGYPVFFDVTHSLQMPGGLSSSAGGRREQVVQLARSGMAVGLAGLFLEAHPDPDVAKCDGPCALRLSQLEPFLAQMKALDDMV
type: DOMAIN
name: DAHP1/KDSA
description: DAHP synthetase I/KDSA
Protein sequence:
MSEPRTTHFGYESVDEAAKATRVAGVFHSVAARYDLMNDLMSAGLHRLWKAFTIGQAAVRPGMRVLDVAGGTADLARAFARRVGPEGQVWLTDINASMLAVGRDRMVDDGCLQPAVQCDAEALPFPDGYFDRVTVAFGLRNMTHKERALVEMQRVLASGGRLLVLEFSQVRKALAPLYDLYSFSVLPWLGKRVAGDEASYRYLAESIRMHPDQETLKTMMEEAGFSRVRYFNLTGGVVALHEGFKP

Annotated regions:
phrase: YDLMNDLMSAGLHRL
type: CONSERVED_SITE
name: UbiE/COQ5_MeTrFase_CS
description: UbiE/COQ5 methyltransferase, conserved site
Protein sequence:
MSLLWQARFFTTVNHLRDLPNTQVPEIAFAGRSNAGKSTAINILSNQKKLCFASKTPGRTQHINYFSIGGAHVGQHRKDETKVEEIRAMLVDLPGYGYAEVSGSAKHHWQALLGDYVQRREQLAALVLIVDSRRPFTDLDIQMLEWFAPTGKPIHCILTKSDKLNRNESTNALRTANTLLASYVDEYGQPFPFTAQLFSALKRTGIDEANDKILELLGLNDEVSEESDSKTAGDAEKAE

Annotated regions:
phrase: EIAFAGRSNAGKSTAINILSNQKKLCFASKTPGRTQHINYFSIGGAHVGQHRKDETKVEEIRAMLVDLPGYGYAEVSGSAKHHWQALLGDYVQRREQLAALVLIVDSRRPFTDLDIQMLEWFAPTGKPIHCILTKSDKLNRNESTNALRTANTLLASYVDEYGQPFPFTAQLFSALKRTGIDEANDKILEL
type: DOMAIN
name: G_ENGB_dom
description: EngB-type guanine nucleotide-binding (G) domain

phrase: EIAFAGRSNAGKSTAINILSNQKKLCFASKTPGRTQHINYFSIGGAHVGQHRKDETKVEEIRAMLVDLPGYGYAEVSGSAKHHWQALLGDYVQRREQLAALVLIVDSRRPFTDLDIQMLEWFAPTGKPIHCILT
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: QVPEIAFAGRSNAGKSTAINILSNQKKLCFASKTPGRTQHINYFSIGGAHVGQHRKDETKVEEIRAMLVDLPGYGYAEVSGSAKHHWQALLGDYVQRREQLAALVLIVDSRRPFTDLDIQMLEWFAPTGKPIHCILTKSDKLNRNESTNALRTANTLLASYVDEYGQPFPFTAQLFSALKRTGIDEANDKILELLG
type: DOMAIN
name: G_ENGB_dom
description: EngB-type guanine nucleotide-binding (G) domain
Protein sequence:
MIDLLIIAGPTAVGKTDISIKLAEKLNGEIISADSMQIYKYMDIGSAKITKDEMKGIPHHLIDVVEPHEEFNVSSFKALAEESIKDIWNRGKLPIIAGGTGLYINSLIYNYDFTDADRDEKYREYLTKLAEDKGKEYVHSLLKDIDEESYEKLYPNDLKRVVRALEVYKITGKSISEYTKENEKKLYDIPYNVNYFILNMNREVLYERINKRVDIMMGKGLIEEVKKLESMGYTPDMQSMKGIGYKEVLFYLNGDISLDEAIYLIKKGSRNYAKRQLTWFRKDKRSIWIDKDKYNSEEEIVDKIIKMVKDK

Annotated regions:
Protein sequence:
MNFPSIQEQLDLITRNTVEIISVDELEQKLVSSQKSGKPLNIKLGADPSRPDLHLGHSVVLRKLRDFQDLGHHAILIIGNFTAMIGDPSGKSKTRPQLSAEEAAENGRSYFEQAIKILDAANTTLCSNADWLGAMTFADVIRLSSHYTVARMLERNDFEQRYRAQEPISIHEFLYPLAQGMDSVHLKNDVELGGTDQKFNLLVGRDLQREYGIAPQVCITMPLLVGTDGKDKMSKSLDNAISFTDTPNDMYGRALSIPDTLIETYSRLLLSQFGAALNEILSQIETNPRLAKRAMARHIVADYYSPEAASAAEEHFDKLFVHKQAPDNLELLELEATSMPIIDLLTLLGAAPSKSEARRMIQAKSVSIDDEKIEDFNAVIALEGEAKIVRAGKRKFFKIRSK

Annotated regions:
phrase: MPIIDLLTLLGAAPSKSEARRMIQAKSVSIDDEKIEDFNAVIALEGEAKIVRAGKRKFFKI
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: QAPDNLELLELEATSMPIIDLLTLLGAAPSKSEARRMIQAKSVSIDDEKIEDFNAVIALEGEAKIVRAGKRKFF
type: DOMAIN
name: SYY-like_C
description: Tyrosine--tRNA ligase SYY-like, C-terminal domain
Protein sequence:
MIADSSSWLKLTKKVRFGDTDAAGVMHFHQLLRWCHEAWEESLERYGLEAQAVFPGCRGQEQWPAIALPVVHCRADFLRPVHGGDQLSLHLTPQRLDPSSFEVHHRFLLEQQDVAHGWIRHVAISTETRRRSALPDAIERWLEASLIGRISEL

Annotated regions:
Protein sequence:
MSGHSKWANIKRQKGAADAVRGKIFTKLGREIQIAVRMGGADPSSNSKLKDVIAKCKANNMPNDNIQRSIKRASGETDGSNYEEITYEGYGPGGVAVICECTTDNRNRTAGDLRHYFDKFGGNLGQSGCVSYMFNKKGVIVIEKNDKVNEETLMMEALDAGAEDFDSDDNCYEIITDPADFSTVREALEAKGYEFIEAEVSMIPTTTTKLTDPEQIKFMDKLIEALEDLDDVSNVYHSWEQDEENEEE

Annotated regions:
phrase: SKWANIKRQKGAADAVRGKIFTKLGREIQIAVRMGGADPSSNSKLKDVIAKCKANNMPNDNIQRSIKRASG
type: DOMAIN
name: TACO1_YebC_N
description: TACO1/YebC-like, N-terminal domain

phrase: YEEITYEGYGPGGVAVICECTTDNRNRTAGDLRHYFDKFGGNLGQSGCVSYMFNKKGVIVIEKNDKVNEETLMMEALDAGAEDFDSDDNCYEIITDPADFSTVREALEAKGYEFIEAEVSMIPTTTTKLTDPEQIKFMDKLIEALEDLDDVSNVYH
type: DOMAIN
name: TACO1_YebC-like_2nd/3rd_dom
description: TACO1/YebC-like, second and third domains
Protein sequence:
MSAAVALAVILAVYVVLRYISSPRGRSKPLNLPPGPRGWPVIGSLGALAGALPPHRALAALAARHGPLMHLRLGSYHAVVASSADTARLVLKVHDLAFADRPRTAAGEVASYGYLGIVHTPYGAYWRMARKLCATELFSARRVDSFERVRAQEMRALARGLFECAGRGAVAVREHVAGATLRNILRMAVGEKWSGCYGSPEGEAFRRTLDEAFAVTGAVSNVGEWVPWLGWLDLQGCVRRMKRLRAQYDRFFEQILDDHDHKKTRRERGRPGAGDSAADDDLVDVLLRLVEEDEDRPETTEASRLTRDGVKAFVQDIVAGGTESSAVTIEWAMSELLRRPDALRAATAELDRVIGHGRWVTERDLPDLPYIDAVVKETMRLHPVGPLLVPHHAREHTVVAGYDVPAGARVLVNVWAIARDPASWPDAPDAFRPERFLNGSSGASVDVRGAHFELLPFGAGRRMCPAHGLAMKLVTAGVANLVHGFAWRLPDGMAPEDVSMEELFGLSTRRKVPLVAVAEPRLPAHLYTNVTPPQQVAGSTIANLSTRPEYKLVF

Annotated regions:
phrase: FGAGRRMCP
type: CONSERVED_SITE
name: Cyt_P450_CS
description: Cytochrome P450, conserved site
Protein sequence:
MPTDLIRYGSISPEMLAYLWLLIEYKNSIMVAGEVATGKTTLLNAFSLFIPPQMKIVSIEDTPEIRLYHENWIAGTTRSGFGGEEYEITMMDLLKAALRQRPDYLIVGEVRGEEAKILFQAITTGHLALSTIHAKSPEAVIRRLNAEPMNIPKIMLEQLNAICMQVRLIYKGRFVRRTKSITEIVEYDPKIDDIILHDVFRWNPEDDTFEFSGESYLLRRIAEFIGISEKEIINELHSRAEFLRNLCKTKPNFEEFVKKICEYKEYHKGD

Annotated regions:
phrase: DLIRYGSISPEMLAYLWLLIEYKNSIMVAGEVATGKTTLLNAFSLFIPPQMKIVSIEDTPEIRLYHENWIAGTTRSGFGGEEYEITMMDLLKAALRQRPDYLIVGEVRGEEAKILFQAITTGHLALSTIHAKSPEAVIRRLNAEPMNIPKIMLEQLNAICMQVRLIY
type: DOMAIN
name: T2SS/T4SS_dom
description: Type II/IV secretion system domain
Protein sequence:
MSARLKEKYVSEITPALVEKFSYSSVMQTPKIEKIVLNMGVGDAVSNAKNLDEAVEELGLISGQKPLVTKAKKSIATFRLREGMSIGAKVTLRGDRMYEFLDKLINVSLPRVRDFHGVSSRAFDGRGNYTLGVREQLIFPEINFDNVNRVRGLDIVIVTTANTDEESRELLTQFGMPFAH

Annotated regions:
phrase: LGLISGQKPLVTKAKK
type: CONSERVED_SITE
name: Ribosomal_uL5_CS
description: Large ribosomal subunit protein uL5, conserved site

phrase: SVMQTPKIEKIVLNMGVGDAVSNAKNLDEAVEELGLISGQKPLVTKAKKSIATFRL
type: DOMAIN
name: Ribosomal_uL5_N
description: Large ribosomal subunit protein uL5, N-terminal

phrase: IGAKVTLRGDRMYEFLDKLINVSLPRVRDFHGVSSRAFDGRGNYTLGVREQLIFPEINFDNVNRVRGLDIVIVTTANTDEESRELLTQFGMP
type: DOMAIN
name: Ribosomal_uL5_C
description: Large ribosomal subunit protein uL5, C-terminal
Protein sequence:
MSKSSLSKSQSCQNEEMPLCDQPLVHLEQVRQVQPEVMSLDQAQQMAEFFSALADPSRLRLMSALARQELCVCDLAAAMKVSESAVSHQLRILRSQRLVKYRRVGRNVYYSLADNHVMNLYREVADHLQESD

Annotated regions:
phrase: DPSRLRLMSALARQELCVCDLAAAMKVSESAVSHQLRILRSQRLVK
type: DOMAIN
name: HTH_ArsR_DNA-bd_dom
description: HTH ArsR-type DNA-binding domain

phrase: FSALADPSRLRLMSALARQELCVCDLAAAMKVSESAVSHQLRILRSQRLVKYRRVGRNVYYSLADNHVMNLYREVA
type: DOMAIN
name: ArsR-like_HTH
description: ArsR-like helix-turn-helix domain

phrase: EFFSALADPSRLRLMSALARQELCVCDLAAAMKVSESAVSHQLRILRSQRLVKYRRVGRNVYYSLADNHVMNLYREVA
type: DOMAIN
name: HTH_ArsR_DNA-bd_dom
description: HTH ArsR-type DNA-binding domain

phrase: MSLDQAQQMAEFFSALADPSRLRLMSALARQELCVCDLAAAMKVSESAVSHQLRILRSQRLVKYRRVGRNVYYSLADNHVMNLYREVADHLQES
type: DOMAIN
name: HTH_ArsR_DNA-bd_dom
description: HTH ArsR-type DNA-binding domain

phrase: CVCDLAAAMKVSESAVSH
type: CONSERVED_SITE
name: ArsR_HTH
description: ArsR-type transcription regulator, HTH motif

phrase: FSALADPSRLRLMSA
type: DOMAIN
name: HTH_ArsR_DNA-bd_dom
description: HTH ArsR-type DNA-binding domain

phrase: ELCVCDLAAAM
type: DOMAIN
name: HTH_ArsR_DNA-bd_dom
description: HTH ArsR-type DNA-binding domain

phrase: SESAVSHQLRILRSQ
type: DOMAIN
name: HTH_ArsR_DNA-bd_dom
description: HTH ArsR-type DNA-binding domain

phrase: RLVKYRRVGRNVYYS
type: DOMAIN
name: HTH_ArsR_DNA-bd_dom
description: HTH ArsR-type DNA-binding domain
Protein sequence:
MPDDFNLKSFLADLPHLPGVYRHLDAAGEVMYVGKARDLKKRVSSYFQKNLASPRIAQMVAKVASVDVTVTRSEAEALLLENNLIKSLRPRYNILFRDDKSYPYLLITGHAWPRIAYYRGATSKRGQYFGPYPNSWAVRETIQILQKVFRLRTCEDTVFANRSRPCLLHQIGRCSAPCVGVIEAGDYAHDVQRAVRFLNGEAREVMDEIEARMLQASTELRFEEAAVLRDQMGSLSKVLHQQTMENVGGDDTDVIAVASAGGKICVNLAMVRGGRHLGDKPFFPTHAEGEQPAQVLEAFVAQHYADGAMPPVLVCSHALPDSGLVGLLAEQGGTRAARVLTRPQGVRRSWLEQAQKNAEMALARALTESGARAGRTLALAEALDLDTDEESLDALRIECFDISHTAGEATQASCVVFLHHDMQPSLYRRYNIVGITPGDDYAAMRQVLTRRFGKVADGEAPMPGLVLIDGGKGQVEVARQVFVELGLDIQSLVGVAKGEGRKVGLETLVFADGRPPVALGKESAALMLIAQVRDEAHRFAITGMRARRAKTRNVSRLEEIEGIGARRRQRLLARFGGLSGVSSASIEDLASVEGISQELAVRIYDALHG

Annotated regions:
phrase: SRLEEIEGIGARRRQRLLA
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: EDLASVEGISQELAVRIYD
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: VIAVASAGGKICVNLAMVRGGRHLGDKPFFPTHAEGEQPAQVLEAFVAQHYADGAMPPVLVCSHALPDSGLVGLLAEQGGTRAARVLTRPQGVRRSWLEQAQKNAEMALARALTESGARAGRTLALAEALDLDTDEESLDALRIECFDISHTAGEATQASCVVFLHHDMQPSLYRRYNIVGITPGDDYAAMRQVLTRRFGKVADGEAPMPGLVLIDGGKGQVEVARQV
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: REVMDEIEARMLQASTELRFEEAAVLRDQMGSLSK
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: LPHLPGVYRHLDAAGEVMYVGKARDLKKRVSSYFQKNLASPRIAQMVAKVASVDVTVTRSEAEALLLENNLIKSLRPRYN
type: DOMAIN
name: GIY-YIG_UvrC_Cho
description: UvrC/Cho-like, GIY-YIG domain

phrase: LRIECFDISHTAGEATQASCVVFLHHDMQPSLYRRYNIVGITPGDDYAAMRQVLTRRFGKVADGEAPMPGLVLIDGGKGQVEVARQVFVELGLDIQSLVGVAKGEGRKVGLETLVFADGRPPVALGKESAALMLIAQVRDEAHRFA
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: HLPGVYRHLDAAGEVMYVGKARDLKKRVSSYFQKNLASPRIAQMVAKVASVDVTVTRSEAEALLLENNLIKSLRPRYN
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: GVYRHLDAAGEVMYVGKARDLKKRVSSYFQKNLASPRIAQMVAKVASVDVTVTRSEAEALLLENNLIKSLRPRY
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: LPGVYRHLDAAGEVMYVGKARDLKKRVSSYFQKNLASPRIAQMVAKVASVDVTVTRSEAEALLLENNLIKSLRPRYNILFR
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: EVMDEIEARMLQASTELRFEEAAVLRDQMGSLS
type: DOMAIN
name: UVR_dom
description: UVR domain
Protein sequence:
MKKIIIASNNQNKIREIKQILKEFDFNIVSLKEENIDIDVEEDGKTFIENAYKKAYEIYKMRKDCMVIADDSGLTVDELEGAPGIYSARFAGIHGDDKKNNEKLLSLLEGVPFEKRNAQFVCSIVLIIDEANSIKVEGEISGFITDKEIGTKGFGYDPLFYVPEFKKTFAELTEDEKNSISHRAIALEKLCSEMKKLNWGE

Annotated regions:
Protein sequence:
MENSLKSSGKPLAAPKVGMVSLGCPKALVDSEQIITQLRAEGYEISGTYDGADLVVVNTCGFIDEAVQESLDAIGEALAENGKVIVTGCLGAKKSASGSGLIAEVHPKVLAVTGPHAVGEVMQAVHSHLPKPHDPFVDLVPAAGIKLTPRHYAYLKISEGCNHRCSFCIIPSMRGELVSRPVAEVMLEAENLFKSGVKELLVISQDTSAYGVDVKYRTGFWNGRPLKTRMTELVGALGELAAQYGAWVRLHYVYPYPHVDEIIPMMAQGPLKGHVLPYLDVPFQHAHPEVLKRMKRPANAERVLERVQKWREICPDLTIRSTFIAGFPGETDAQFETLLDFIRDAELDRVGCFAYSPVEGASANALDGALPDDVREARRARFMEVAEEVSAARIARKIGKTLKVLIDEVNAEGGIGRTAADAPEIDGVVYVEPAAKASKRYKVGEFVSVKITGADSHDLWGEV

Annotated regions:
phrase: KISEGCNHRCSFCIIPSMRGELVSRPVAEVMLEAENLFKSGVKELLVISQDTSAYGVDVKYRTGFWNGRPLKTRMTELVGALGELAAQYGAWVRLHYVYPYPHVDEIIPMMAQGPLKGHVLPYLDVPFQHAHPEVLKRMKRPANAERVLERVQKWREICPDLTIRSTFIAGFPGETDAQFETLLDF
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: IGKTLKVLIDEVNAEGGIGRTAADAPEIDGVVYVEPAAKASKRYKVGEFVSVKITGADSHDLWGE
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: LTPRHYAYLKISEGCNHRCSFCIIPSMRGELVSRPVAEVMLEAENLFKSGVKELLVISQDTSAYGVDVKYRTGFWNGRPLKTRMTELVGALGELAAQYGAWVRLHYVYPYPHVDEIIPMMAQGPLKGHVLPYLDVPFQHAHPEVLKRMKRPANAERVLERVQKWREICPDLTIRSTFIAGFPGETDAQFETLLDFIRDAELDRVGCFAYSPVEGASANALDGALPDDVREARRARFMEVAEEVSA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: HYAYLKISEGCNHRCSFCIIPSMRGELVSRPVAEVMLEAENLFKSGVKELLVISQDTSAYGVDVKYRTGFWNGRPLKTRMTELVGALGELAAQYGAWVRLHYVYPYPHVDEIIPMMAQGPLKGHVLPYLDVPFQHAHPEVLKRMKRPANAERVLERVQKWREICPDLTIRSTFIAGFPGETDAQFETLLDFIRDAELDRVGCFAYSPVEGASANALDGALPDDVREARRARFM
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: ARKIGKTLKVLIDEVNAEGGIGRTAADAPEIDGVVYVEPAAKASKRYKVGEFVSVKITGADSHDLWGE
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: PKVGMVSLGCPKALVDSEQIITQLRAEGYEISGTYDGADLVVVNTCGFIDEAVQESLDAIGEALAENGKVIVTGCLGAKKSASGSGLIAEVHPKVLAVTGPHAVGEVMQAVHSHL
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: APKVGMVSLGCPKALVDSEQIITQLRAEGYEISGTYDGADLVVVNTCGFIDEAVQESLDAIGEALAENGKVIVTGCLGAKKSASGSGLIAEVHPKVLAVTGPHAVGEVMQAVHSHLPKPHDPFVDLVPAAGIKLTPRHYAYLKISEGCNHRCSFCIIPSMRGELVSRPVAEVMLEAENLFKSGVKELLVISQDTSAYGVDVKYRTGFWNGRPLKTRMTELVGALGELAAQYGAWVRLHYVYPYPHVDEIIPMMAQGPLKGHVLPYLDVPFQHAHPEVLKRMKRPANAERVLERVQKWREICPDLTIRSTFIAGFPGETDAQFETLLDFIRDAELDRVGCFAYSPVEGASANALDGALPDDVREARRARFMEVAEEVSAARIARKIGKTLKVLIDEVNAEGGIGRTAADAPEIDGVVYVEPAAKASKRYKVGEFVSVKITGADSHDLWGE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LKISEGCNHRCSFCIIPSMR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: KVGMVSLGCPKALVDSEQIITQLRAEGYEISGTYDGADLVVVNTCGFIDEAVQESLDAIGEALAENGKVIVTGCLGAKK
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal
Protein sequence:
MAKIDNAVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPDQGQDLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVGSETA

Annotated regions:
phrase: VLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPH
type: DOMAIN
name: Epimerase_deHydtase
description: NAD-dependent epimerase/dehydratase
Protein sequence:
MNWLTNVVRPKIRNILRRETPENLWIKCPDTGQLVFYKDVEQNQFVIPGSNYHMRMGATARLRSVFDNETWYDVALPEVTADPLKFRDERKYVDRIKDARAKTGAHDAVKVGYGKLEGLGVVAAVQDFDFMGGSLGMAAGEAIIRGLELAVEKHAPFIMFAASGGARMQEGILSLMQMPRTTVAVQLLREAGLPYIVVLTNPTTGGVTASYAMLGDIQLAEPGALIGFAGARVIEQTIREKLPDGFQRAEYLRDHGMVDMVVHRHELRPTLARLCRILTKTPLPAVEEPAVVDDDAQDIEAVATEIVATPPEPAPPPAAPQA

Annotated regions:
phrase: LWIKCPDTGQLVFYKDVEQNQFVIPGSNYHMRMGATARLRSVFDNETWYDVALPEVTADPLKFRDERKYVDRIKDARAKTGAHDAVKVGYGKLEGLGVVAAVQDFDFMGGSLGMAAGEAIIRGLELAVEKHAPFIMFAASGGARMQEGILSLMQMPRTTVAVQLLREAGLPYIVVLTNPTTGGVTASYAMLGDIQLAEPGALIGFAGARVIEQTIREKLPDGFQRAEYLRDHGMVDMVVHRHELRPTLARLCRILTKTPLPAVEEPAVV
type: DOMAIN
name: COA_CT_N
description: Acetyl-coenzyme A carboxyltransferase, N-terminal

phrase: KDARAKTGAHDAVKVGYGKLEGLGVVAAVQDFDFMGGSLGMAAGEAIIRGLELAVEKHAPFIMFAASGGARMQEGILSLMQMPRTTVAVQLLREAGLPYIVVLTNPTTGGVTASYAMLGDIQLAEPGALIGFAGARVIEQTIREKL
type: DOMAIN
name: AcCoA_carboxyl_beta
description: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta
Protein sequence:
MNNIFKGLITAIITPFRDNKLDLNALEKILEYQINAEVNAVVIAGSTGEGSSLSFEEYKLLLQTAKDIVNKRIPVISGCSSNNTACAIELAAESTKIGVDGFMISPPSYLKPTQGGIYKHFEAIHEASNLPIMLYSVPSRTGVDFTDETILKLSKLSRILALKDAGIDLERPLRIKSVINKELNLLCGNDDLSLAFNAQGGVGCVSVASNITPKLCKELQEKWHNNDVKGALGIHQRLLPLYKALFVESNPIPVKYAMYYLGFCTNEIRLPLTEATDTTKKQIEEIITSLSIKV

Annotated regions:
phrase: YSVPSRTGVDFTDETILKLSKLSRILALKD
type: ACTIVE_SITE
name: Schiff_base-form_aldolases_AS
description: Schiff base-forming aldolase, active site

phrase: AVVIAGSTGEGSSLSFE
type: CONSERVED_SITE
name: Schiff_base-form_aldolases_CS
description: Schiff base-forming aldolase, conserved site
Protein sequence:
MQRWPKYGGTDVNTRTVHDLLNTINTMSARIKTLERYEHALREIHKVVVILKPSANTHSFEPDALPALIMQFLSDFAGRDINTLTHNINYKYDYNYPPAPVPAMQPPPPPPQPPAPPQPPYYNNYPYYPPYPFSTPPPTQPPESNVAGVGGSQSLNQITLTNEEESELAALFKNMQTNMTWELVQNFVEVLIRIVRVHVVNNVTMINVISSITSVRTLIDYNFTEFIRCVYQKTNIRFAIDQYLCTNIVTFIDFFTRVFYLVMRTNFQFTTFDQLTQYSNELYTRIQTSILQSAAPLSPPTVETVNSDIVISNLQEQLKRERALMQQISEQHRIANERVETLQSQYDELDLKYKEIFEDKSEFAQQKSENVRKIKQLERSNKELNDTVQKLRDENAERLSEIQLQKGDLDEYKNMNRQLNEDIYKLKRRIESTFDKDYVETLNDKIESLEKQLDDKQNLNRELRSSISKIDETTQRYKLDAKDIMELKQSVSIKDQEIAMKNAQYLELSAIYQQTVNELTATKNELSQVATTNQSLFAENEESKVLLEGTLAFIDSFYQIIMQIEKPDYVPISKPQLTAQESIYQTDYIKDWLQKLRSKLSNADVANLQSVSELSDLKSQIISIVPRNIVNRILKENYKVKVENVNAELLESVAVTSAVSALVQQYERSEKQNVKLRQEFEIKLNDLQRLLEQNQTDFESISEFISRDPAFNRNLNDERFQNLRQQYDEMSSKYSALETTKIKEMESIADQAVKSEMSKLNTQLDELNSLFVKYNRKAQDIFEWKTSMLKRYETLARTTAASVQPNVE

Annotated regions:
phrase: KYGGTDVNTRTVHDLLNTINTMSARIKTLERYEHALREIHKVVVILKPSANTHSFEPDALPALIMQFLSDFAGRDINTLTHNINYKYDY
type: DOMAIN
name: Desmo_N
description: Viral desmoplakin, N-terminal
Protein sequence:
MSSYENHRALDGLTLGKSTDYRDNYDASLLQGVPRSLNRDPLGLTADNLPFHGADIWTLYELSWLNSHGLPQIAIGHVELDYTSVNLIESKSFKLYLNSFNQTRFDTWETVRQTLERDLRACAQGNVSVKLHRLDELEGLPVAHFHGACIDDQDISIDNYQFTASYLQHAVSGEKRVEETLVSHLLKSNCLITHQPDWGSIQIQYRGRKIDREKLLRYLVSFRHHNEFHEQCVERIFNDLLRFCQPETLSVYARYTRRGGLDINPWRSNTDFVPATGRLARQ

Annotated regions:
phrase: YRDNYDASLLQGVPRSLNRDPLGLTADNLPFHGADIWTLYELSWLNSHGLPQIAIGHVELDYTSVNLIESKSFKLYLNSFNQTRFDTWETVRQTLERDLRACAQGNVSVK
type: DOMAIN
name: QueF_N
description: NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal
Protein sequence:
MTSTTNLARLLTSLAVLCAAASASAQQAQPEGPHGPGAAAGSRCPVTGAIRALTSLTAAVEGPGNQDQEAPPAVEAPRPKPRSNQDWWPQALNLGMLHQNSPMGNPMGEDFNYAEEFKTLDLDALKKDIEEVLTTSQDWWPADYGHYGPLFIRMAWHSAGTYRVADGRGGASDGTQRFAPLNSWPDNANLDKARRLLWPIKQKYGRKISWADLMVLAGNVSLESMGFETFGFGGGREDVWEPQQDVDWGPEAEWLGGERYDGKSMPNPLSATQMGLIYVNPEGPKGKPDPIAAAQAIRLTFGRMAMSDEETVALIAGGHTFGKAHGAASPHEYLGPAPEGADITEQGLGWKNRYRSGKGADTITSGLEGAWSSTPTKWSNEYFENLFGYDWELTKSPAGAWQWTPKGGEGDGTVPDAHDPTRFHAPMMFTTDLALRMDPAYETISRRFLENPEEFRLAFAKAWYKLTHRDMGPVSRLLGPEVPEAQLWQDPIPPVDHSLIDEQDIARLKRAILDSGLTTEQLVSTAWASASSFRGSDYRGGANGARIRLAPQKDWEVNEPAELAKVLPVFERIQREFNDAQNDDTRVSIADLIVLGGCAAVEQAARKAGAEVEVPFTPGRTDASQEETDVQSFAVMEPIADGFRNYLGSSSDRRPEELLVDKAQLLTLTAPEMTALVGGLRVLGANHGDSPLGVFTDRPGTLTNDFFVNLLDMGTEWRQSAEGAGVFEGIDHKTGEVKWTGSRVDLIFGSNSQLRAIAEVYASNDARE

Annotated regions:
phrase: GPLFIRMAWHS
type: ACTIVE_SITE
name: Peroxidases_AS
description: Peroxidase, active site

phrase: LDSGLTTEQLVSTAWASASSFRGSDYRGGANGARIRLAPQKDWEVNEPAELAKVLPVFERIQREFNDAQNDDTRVSIADLIVLGGCAAVEQAARKAGAEVEVPFTPGRTDASQEETDVQSFAVMEPIADGFRNYLGSSSDRRPEELLVDKAQLLTLTAPEMTALVGGLRVLGANHGDSPLGVFTDRPGTLTNDFFVNLLDMGTEWRQSAEGAGVFEGIDHKTGEVKWTGSRVDLIFGSNSQLRAIAEVYAS
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: ADYGHYGPLFIRMAWHSAGTYRVADGRGGASDGTQRFAPLNSWPDNANLDKARRLLWPIKQKYGRKISWADLMVLAGNVSLESMGFETFGFGGGREDVWEPQQDVDWGPEAEWLGGERYDGKSMPNPLSATQMGLIYVNPEGPKGKPDPIAAAQAIRLTFGRMAMSDEETVALIAGGHTFGKAHGAASPHEYLGPAPEGADITEQGLGWKNRYRSGKGADTITSGLEGAWSSTPTKWSNEYFENLFGYDWELTKSPAGAWQWTPKGGEGDGTVPDAHDPTRFHAPMMFTTDLALRMDPAYETISRRFL
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: LDKARRLLWPIKQKYGRKISWADLMVLAGNVSLESMGFETFGFGGGREDVWEPQQDVDWGPEAEWLGGERYDGKSMPNPLSATQMGLIYVNPEGPKGKPDPIAAAQAIRLTFGRMAMSDEETVALIAGGHTFGKAHGAASPHEYLGPAPEGADITEQGLGWKNRYRSGKGADTITSGLEGAWSSTPTKWSNEYFENLFGYDWELTKSPAGAWQWTPKGGEGDGTVPDAHDPTRFHAPMMFTTDLALRMDPAYETISRRFLENPEEFRLAFAKAWYK
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: TVALIAGGHT
type: BINDING_SITE
name: Peroxidases_heam-ligand_BS
description: Peroxidases heam-ligand binding site

phrase: TVALIAGGHTFGKAH
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: GFETFGFGGGRE
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: WSSTPTKWSNEYFEN
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: GPLFIRMAWHSAGT
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: ISWADLMVLAGNVSLES
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase
Protein sequence:
MSGDGSPEIEVDGSGLRVAVVAARWHAETMDGLLAGARRALEASGVTEVTEVRVPGAFELPVAAARLARAGHDAVVALGVVIRGGTPHFDYVCDAATQGLTQVAVTTGVPIGFGVLTVDNEAQALHRAGLRGSREDKGAEAVLAALETVVALRGVAPLPQG

Annotated regions:
Protein sequence:
MTAQTPIHVYSEIGKLKKVLLHRPGKEIENLMPDYLERLLFDDIPFLEDAQKEHDAFAQALRDEGIEVLDLETLAAESLGTPEIREAFIDEYLSEANIRGRATKKAIRELLMAIEDNQELIEKTMAGVQKSELPEIPASEKGLTDLVESNYPFAIDPMPNLYFTRDPFATIGTGVSLNHMFSETRNRETLYGKYIFTHHPIYGGGKVPMVYDRNETTRIEGGDELVLSKDVLAVGISQRTDAASIEKLLVNIFKQNLGFKKVLAFEFANNRKFMHLDTVFTMVDYDKFTIHPEIEGDLRVYSVTYDNEELHIVEEKGDLAELLAANLGVEKVDLIRCGGDNLVAAGREQWNDGSNTLTIAPGVVVVYNRNTITNAILESKGLKLIKIHGSELVRGRGGPRCMSMPFEREDI

Annotated regions:
Protein sequence:
MSDNLALHGTTILCLKKNEEIIIAADGQVSHGNTILKSTARKLRTIANNKIIAGFAGSTADGLALFEKLEVKIEQHKHNLLRSAVELAKDWRSDKYLRRLEAMMIVADRNHILILTGNGDVVEPENNVAAIGSGGLFALSAARALMSYENNLTAEEIALKSMNIAADLCVFSNHNIIMEKVV

Annotated regions: