nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSQSPEHRTDGRRPEQLRPFSVTWNPMGFALSSLVVHTGRTAVLCSVCLEGKVPRWRKGEGLGWLSAEYRLLPGSTPQRQSRELMKLSGRTQEIQRLIGRSLRAVIDMERLGERTLLIDCDVIQADAGTRTASITGAWLALDQACRSLVEQGVLEQSPLVDQVAAVSVGLVDGQALLDLDYSEDSRAEVDLNVVQAGDGRLLEIQGTAEGAPFSRSQLNELLDLAEPGLSSLMQAQRQAFTEHSSVT

Annotated regions:
phrase: CDVIQADAGTRT
type: CONSERVED_SITE
name: RNase_PH_CS
description: Ribonuclease PH, conserved site

phrase: DQVAAVSVGLVDGQALLDLDYSEDSRAEVDLNVVQAGDGRLLEIQGTAEGAPFSRSQLNELLDLA
type: DOMAIN
name: ExoRNase_PH_dom2
description: Exoribonuclease, phosphorolytic domain 2

phrase: QLRPFSVTWNPMGFALSSLVVHTGRTAVLCSVCLEGKVPRWRKGEGLGWLSAEYRLLPGSTPQRQSRELMKLSGRTQEIQRLIGRSLRAVIDMERLGERTLLIDCDVIQADAGTRTASITGAWLAL
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1
Protein sequence:
MVDINQIPTRRPFHRRRKTCPFSGANAPKIDYKDVKLLQRYISERGKIVPSRITAVSQKKQRELAKAIKRARFLGLLPYVVK

Annotated regions:
phrase: IDYKDVKLLQRYISERGKIVPSR
type: CONSERVED_SITE
name: Ribosomal_bS18_CS
description: Small ribosomal subunit protein bS18, conserved site
Protein sequence:
MKRMIALDGAQGEGGGQILRSALSLSMITGQPFTITSIRAGRAKPGLLRQHLTAVKAAAEICRATVEGAELGSQRLVFRPGTVRGGEYRFAIGSAGSCTLVLQTVLPALWFADGPSRVEVSGGTDNPSAPPADFIRRVLEPLLAKIGIHQQTTLLRHGFYPAGGGVVATEVSPVASFNTLQLGERGNIVQMRGEVLLAGVSRHVAEREIATLAGSFSLHEQNIHNLPRDQGPGNTVSLEVESENITERFFVVGEKRVSAEVVAAQLVKEVKRYLASPAAVGEYLADQLVLPMALAGAGEFKVAHPSCHLLTNIAVVERFLPVRFGLIETDGVTRVSIE

Annotated regions:
phrase: HGFYPAGGGV
type: CONSERVED_SITE
name: RNA3'_term_phos_cycl-like_CS
description: RNA 3'-terminal phosphate cyclase-like, conserved site

phrase: ERGNIVQMRGEVLLAGVSRHVAEREIATLAGSFSLHEQNIHNLPRDQGPGNTVSLEVESENITERFFVVGEKRVSAEVVAAQLVKEVKRY
type: DOMAIN
name: RNA3'-term_phos_cycl_insert
description: RNA 3'-terminal phosphate cyclase, insert domain

phrase: GEGGGQILRSALSLSMITGQPFTITSIRAGRAKPGLLRQHLTAVKAAAEICRATVEGAELGSQRLVFRPGTVRGGEYRFAIGSAGSCTLVLQTVLPALWFADGPSRVEVSGGTDNPSAPPADFIRRVLEPLLAKIGIHQQTTLLRHGFYPAGGGVVATEVSPVASFNTLQLGERGNIVQMRGEVLLAGVSRHVAEREIATLAGSFSLHEQNIHNLPRDQGPGNTVSLEVESENITERFFVVGEKRVSAEVVAAQLVKEVKRYLASPAAVGEYLADQLVLPMALAGAGEFKVAHPSCHLLTNIAVVERFLPVR
type: DOMAIN
name: RNA3'_phos_cyclase_dom
description: RNA 3'-terminal phosphate cyclase domain
Protein sequence:
MKASLLNKLDILQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVYAAYKEWCKVQGDLEGAQALLKDSDPDLREMAVEEVREAKEQLLTLESQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFESGAHRVQRVPETESQGRVHTSACTVAVLPEPDEQAAIEINPADLRVDTYRASGAGGQHVNKTDSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNAIASERKLLVGSGDRSERIRTYNYPQGRVTDHRINLTLYSLDDILSGGVEAVIEPLLAEYQADQLAALGD

Annotated regions:
phrase: AQALLKDSDPDLREMAVEEVREAKEQLLTLESQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKF
type: DOMAIN
name: PCRF
description: Peptide chain release factor

phrase: AAIEINPADLRVDTYRASGAGGQHVNKTDSAIRITHLPTGIVVECQEERSQHKNRARAMSWLSAKLNDMQTSAAQNAIASERKLLVGSGDRSERIRTYNYPQGRVTDH
type: DOMAIN
name: Pep_chain_release_fac_I
description: Peptide chain release factor class I

phrase: LQDRFEELTALLGDAEVISDQTRFRAYSREYAEVEPVYAAYKEWCKVQGDLEGAQALLKDSDPDLREMAVEEVREAKEQLLTLESQLQRMLLPKDPNDGRNVFLEIRAGTGGDEAAIFSGDLFRMYSRYAEKRGWRLEILSENEGEHGGYKEIIARVEGENVYGKLKFESGAHRVQRVPETESQGRVHTSACT
type: DOMAIN
name: PCRF
description: Peptide chain release factor

phrase: RASGAGGQHVNKTDSA
type: DOMAIN
name: Pep_chain_release_fac_I
description: Peptide chain release factor class I
Protein sequence:
MAASASSLALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSPASRFARNVAITSEFEVEEDGFADVAPPKEQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSGSGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPPRRQY

Annotated regions:
phrase: NRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSEAE
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: LKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGP
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: RVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRVSE
type: DOMAIN
name: RRM2_NsCP33-like
description: NsCP33-like, RNA recognition motif 2

phrase: VYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQI
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: LFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPL
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: RVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKSLDGADLDGRQIRV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: KLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain
Protein sequence:
MRIAAIIVAAGRGSRAGAGMPKQWRAIAGKRVADWTVFAFADHPAIDQIVLVHHADDSEQIAAIAPSVICVTGGATRDGSVRNGLEALADAPPDLVLIHDVARPCVPASVIDAVIEALRETPGAAPALPVTDALWRGQDNRVTGVQDRAQLFRAQTPQGFHYDALLQAHRAQAGPAADDVEVARAAGLPVTIVPGHEHNLKITHPGDFDRAENLLRGHMDIRLGNGYDVHRFGTGDHVILCGIKIPHGRGLQGHSDADVGMHAVTDALYGALAEGDIGRHFPPSDPQWKGAASQIFLDHAARLVAAKGFAISNVDCTLVCEHPKIGPHAAAMQAEMARIMGIDASRVSIKATTSERLGFTGREEGIAALATAALVKT

Annotated regions:
phrase: RGHMDIRLGNGYDVHRFGTGDHVILCGIKIPHGRGLQGHSDADVGMHAVTDALYGALAEGDIGRHFPPSDPQWKGAASQIFLDHAARLVAAKGFAISNVDCTLVCEHPKIGPHAAAMQAEMARIMGIDASRVSIKATTSERLGFTGREEGIAALATAALV
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: VLIHDVA
type: CONSERVED_SITE
name: ISPD_synthase_CS
description: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site

phrase: IRLGNGYDVHRFGTGDHVILCGIKIPHGRGLQGHSDADVGMHAVTDALYGALAEGDIGRHFPPSDPQWKGAASQIFLDHAARLVAAKGFAISNVDCTLVCEHPKIGPHAAAMQAEMARIMGIDASRVSIKATTSERLGFTGREEGIAALATAA
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: IRLGNGYDVHRFGTGDHVILCGIKIPHGRGLQGHSDADVGMHAVTDALYGALAEGDIGRHFPPSDPQWKGAASQIFLDHAARLVAAKGFAISNVDCTLVCEHPKIGPHAAAMQAEMARIMGIDASRVSIKATTSERLGFTGREEGIAALATAALV
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RLGNGYDVHRFGTGDHVILCGIKIPHGRGLQGHSDADVGMHAVTDALYGALAEGDIGRHFPPSDPQWKGAASQIFLDHAARLVAAKGFAISNVDCTLVCEHPKIGPHAAAMQAEMARIMGIDASRVSIKATTSERLGFTGREEGIAALATAA
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: SDADVGMHAVTDALY
type: CONSERVED_SITE
name: MECDP_synthase_CS
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site

phrase: RLGNGYDVHRFGTGDHVILCGIKIPHGRGLQGHSDADVGMHAVTDALYGALAEGDIGRHFPPSDPQWKGAASQIFLDHAARLVAAKGFAISNVDCTLVCEHPKIGPHAAAMQAEMARIMGIDASRVSIKATTSERLGFTGREEGIAALATAALV
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Protein sequence:
MVEGKGFLVSSVTELHRKEKQKKKGKSGGFESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEKLKQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELTKGPDVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQILTQLSENRQTLLFSATLPSALAEFAKAGLREPQLVRLDVENKISPDLKLSFLTVRPEEKYSALLYLVREHISSDQQTLIFVSTKHHVEFVNSLFKLENIEPSVCYGDMDQDARKIHVSRFRARKTMLLIVTDIAARGIDIPLLDNVINWDFPPRPKIFVHRVGRAARAGRTGCAYSFVTPEDMPYMLDLHLFLSKPVRPAPTEDEVLKNMEEVMTKTSQAIDSGVTVYGRFPQKTIDLIFNRTREMIDSSAELDSLERTSTKAFRLYSKTKPSPSKESIRRAKDLPREGLHPIFRSIIETGELEAMSFFQKIKNFRPKQTILEAEGEVAKSKHVKGPAGQWVDVMKKKRAIHEEIINTRHQQNQKTSNNHLEMEAEPTTSFVDGTVEGSKVSGKKRKAQETFKDDEFFISSIPVNHHSEAGLSLRGNEGFGSNRLDAAVLDLVADDGQGIKQQQSNYHWDKKGKKYIKLNNGDRVTASGKIKTESGAKATAKKTGIYKRWQERSHKKVSRDSGDADETTRMSGRGGRDGKRRQGSVPNAHVRSEIKDLDQVRKERQQKANKVSYLQSKRGGRGGRGGARGGRGGGARGGRGGSRDFGGGGRDFGSSSDRGGRSGGRDFGGRRGGASTSSRGGKRGGGRGGGGKRGRGR

Annotated regions:
phrase: DLVADDGQGIKQQQSNYHWDKKGKKYIKLNNGDRVTASGKIKTESGAKATAKKTGIYKRWQ
type: DOMAIN
name: DBP10_C
description: DBP10, C-terminal

phrase: KYSALLYLVREHISSDQQTLIFVSTKHHVEFVNSLFKLENIEPSVCYGDMDQDARKIHVSRFRARKTMLLIVTDIAARGIDIPLLDNVINWDFPPRPKIFVHRVGRAARA
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: EFVNSLFKLENIEPSVCYGDMDQDARKIHVSRFRARKTMLLIVTDIAARGIDIPLLDNVINWDFPPRPKIFVHRVGRAARA
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: GGFESLNLGPNVFNAIKKKGYKVPTPIQ
type: DOMAIN
name: RNA_helicase_DEAD_Q_motif
description: RNA helicase, DEAD-box type, Q motif

phrase: MPLILSGVDVVAMARTGSGKTAAFLIPMLEKLKQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELTKGPDVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQILTQLSENRQTLLFSATLPSALAEFAKAGLREPQL
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: GYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEKLKQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELTKGPDVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQILTQLSENRQTLLFSATLPSALAEFAKAGLREPQLVRLDVENKISPDLKLSFLTV
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: DLVADDGQGIKQQQSNYHWDKKGKKYIKLNNGDRVTASGKIKTESGAKATAKKTGIYKRWQE
type: DOMAIN
name: DBP10_C
description: DBP10, C-terminal

phrase: TPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEKLKQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELTKGPDVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQILTQLSENRQTLLFSATLPSALA
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEKLKQHVPQGGVRALILSPTRDLAEQTLKFTKELGKFTDLRVSLLVGGDSMEDQFEELTKGPDVIIATPGRLMHLLSEVDDMTLRTVEYVVFDEADSLFGMGFAEQLHQILTQLSENRQTLLFSATLPSALAEFAKAGLREPQLV
type: DOMAIN
name: DDX54/DBP10_DEAD-box_helicase
description: DDX54/DBP10 family, DEAD-box helicase domain

phrase: KYSALLYLVREHISSDQQTLIFVSTKHHVEFVNSLFKLENIEPSVCYGDMDQDARKIHVSRFRARKTMLLIVTDIAARGIDIPLLDNVINWDFPPRPKIFVHRVGRAARAGRTGCAYSFVTPEDMPYMLDLHLFLSKPVRPAPTEDEVLKNMEEV
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like
Protein sequence:
MQQNHMSLSNMIKEVKEVFFHVPALLIPTRYREIYREIDRAPKLLEQSFYTIFIKVWNITEKVTVTDVFYYSSVEDPLGLQSPRHSRWAQNTDEEQRKQARIIIQSVYKPNSFIRITSNKFTRVLITSLFVLTYFQSNGVFQSFPYFESQINGFLFKKMNNINQLEINSTNTCIIKITDLLTHQKSKELLGNSLPTNSILRWKMHSKISDIKTIFNMPEKWIYLPLGLGLENSEQIFSYRNFDICNLTKNSSNIMKIKNNRTILDPKIDKYPLVLKNKENILFFHKLPIQFFLFPYIVLRIWLAPVFVLWWSYQFNSEEKENIKNNLKNIHDIEISTIQKFVAKAITFRDIGGMESLKQELATVAFLLKQKNYSNSYPMGYLFAGPPGTGKTLMAKAMSYEAETPYLYVEGSQFRCREEGVANARVDDLFKQIQNISPCILYIDEIDSIAERREEANKQLEQLKTIGDSIEGSNINIDQKPSDTVLMQFLIYMDGYKKRNDLIIIGATNRIETLDDAIMRPGRFDRQIVFSPPFFEERKDILRIFLRNTKALVDDTTKTMMAERSIGLNGCDLRLLADNILLLSALESRNQQKTIPVINEDTFDRALERVSRIRHIISNYELAFGKYDFYRTAYHEAGIALIHTLLPECRPVYSVKLFPKPLNDRYLEIERENLKVPSSDIISTNNIDYFVQKIVGLLAGRAAESILFDFYPGQISTYLNKTYDPNIQGAYNIAHHIVEFGLLDSVTGVIHYLNSENENNIKDPFVTK

Annotated regions:
phrase: YPMGYLFAGPPGTGKTLMAKAMSYEAETPYLYVEGSQFRCREEGVANARVDDLFKQIQNISPCILYIDEIDSIAERREEANKQLEQLKTIGDSIEGSNINIDQKPSDTVLMQFLIYMDGYKKRNDLIIIGATNRIETLDDAIMRPGRFDRQIVFSPP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: TAYHEAGIALIHTLLPECRPVYSVKLFPKPLNDRYLEIERENLKVPSSDIISTNNIDYFVQKIVGLLAGRAAESILFDFYPGQISTYLNKTYDPNIQGAYNIAHHIVEFGLLDSVTGVIHYLNSENE
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: LFAGPPGTGKTLMAKAMSYEAETPYLYVEGSQFRCREEGVANARVDDLFKQIQNISPCILYIDEIDSIAERREEANKQLEQLKTIGDSIEGSNINIDQKPSDTVLMQFLIYMDGYKKRNDLIIIGATNRIETLDDAIMRPGRFDRQIVF
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: LIIIGATNRIETLDDAIM
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site
Protein sequence:
MPPAVVDTITAATTAELRARRDATVGDIVELRLDYLTDIDVAGALADRRTPVIVTCRASWEGGRFAGDEATRLGVLARAIELGAEYVDVEWKADRRGLPSNPRTTLVLSHHDFSGMPADLPGLVRTMAAEPGAIVKVAVTPTRLRDCLTLRETMRLDLPHVAIAMGPMGQVTRTAPALFGSRWTYGGVAAPGQTSASDLVDVYRVGRQSATTALYAVAGAPLAHSASPAMHNAAFAALGLDAVYVVLETDDAAELLEVGEALGLRGASVTAPLKTGVFARVPRRDDLSATIGALNTLRRDAHGWEGRNYDVAGFLSPFVRRDENLRGRRAVVLGAGGAARTALWALGARGARVEVAARRMDRARALAAEFGVTASTWPPAAGWDLLVNTTPVGTWPDVDALPIQADAVRGRMVYDLIYNPEETGLLAVARAQGAEAIGGLEMLVGQACHQFEWWTGQPAPRDVMAGAARRFLESKRADV

Annotated regions:
phrase: GLEMLVGQACHQFEWWTGQPAPRDVMAGAA
type: DOMAIN
name: SDH_C
description: SDH, C-terminal

phrase: VAGAPLAHSASPAMHNAAFAALGLDAVYVVLETDDAAELLEVGEALGLRGASVTAPLKTGVFARVPRRDDLSATIGALNT
type: DOMAIN
name: Shikimate_DH-bd_N
description: Shikimate dehydrogenase substrate binding, N-terminal
Protein sequence:
MSVGFIGAGQLAFALAKGFTAAGVVAAHKIMASSPDMDLATVSALRKMGVNLTHHNKETVQHSDVLFLAVKPHIIPFILDEIAANIEARHIVVSCAAGVTISSIEKKLTAFQPAPKVIRCMTNTPVVVREGATVYATGTHAQVEDGRLLEQLMSSVGFCTEVEEDLIDAVTGLSGSGPAYAFTALDALADGGVKMGLPRRLAVRLGAQALLGAAKMLLDSEQHPGQLKDNVCSPGGATIHALHVLESGGFRSLLIKAVEASCTRTRELQSMADQEKVSPAAIKKTILDKVKLDSPPGTSLAPSGHSKLLPRSMAPAGKQD

Annotated regions:
phrase: EDLIDAVTGLSGSGPAYAFTALDALADGGVKMGLPRRLAVRLGAQALLGAAKMLLDSEQHPGQLKDNVCSPGGATIHALHVLESGGFRSLLIKAVEASCTRTRE
type: DOMAIN
name: P5CR_dimer
description: Pyrroline-5-carboxylate reductase, dimerisation domain

phrase: VGFIGAGQLAFALAKGFTAAGVVAAHKIMASSPDMDLATVSALRKMGVNLTHHNKETVQHSDVLFLAVKPHIIPFILDEIAANIEARHIVVSCAA
type: DOMAIN
name: P5C_Rdtase_cat_N
description: Pyrroline-5-carboxylate reductase, catalytic, N-terminal

phrase: PGQLKDNVCSPGGATIHALHVL
type: CONSERVED_SITE
name: P5CR-like_CS
description: Pyrroline-5-carboxylate reductase-like conserved site
Protein sequence:
MRVMGIQKNYPLLWKGGMMIFWIMTICSATMWVTVYYGVPVWRDADTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEIHLENVTENFNMWKNNMVKQMHKDIISLWDQSLQPCVKLTPLCVTLNCNRVNNSSSSNSTNNXXTSSNSTVSPGIKXEMMNCSFNMTXXVXXKKXKVSALFYRLDVXQIDSEQTNSTXYRLINCNTSTVTQACPKVTFEPIPIHYCAPAGFAILKCKDKNFTGTGPCXNVSTVQCTHGIRPVXTTQLLLNGSLAEERVMIRSENLTNNTXTILVQFQNPVRINCTRPSNNTRKSLRIGPGQTFYATGEVIGDIRRAHCNVSTQDWNDTLKEVVTQLRGHFKNKTIIFKNHAGGDLEIVTHSFNCGGEFFYCNTTDLFNSTWDKDGNGTVSSGSNGTITLQCRIKQIINMWQRVGQAMYAPPIQGVIRCDSNITGLLLTRDGGNGNDSQANETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRARRRVVQREKRAVGLGAVFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLKAIEAQQHMLRLTVWGIKQLQARVLALERYLKDQQLLGIWGCSGKLICTTNVPWNSSWSNKTYSDIWDNMTWLQWDKEISNYTSIIYELIEESQNQQEKNEQDLLALDKWASLWNWFNITNWLWYIKIFIMIVGGLIGLRIVFAVLTIINRVRQGYSPLSFQTLTHHQREPDRPERIEEGGGEQDKDRSLRLVSGFFALVWDDLRSL

Annotated regions:
phrase: VQARQLLSGIVQQQSNLLKAIEAQQHMLRLTVWGIKQLQARVLALERYLKDQQLLGIWGCSGKLICTTNVPWNSSWSNKTYSDIWDNMTWLQWDKEISNYTSIIYELIEESQNQQEKNEQDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASITLTVQARQLLSGIVQQQSNLLKAIEAQQHMLRLTVWGIKQLQARVLALERYLKDQQLLGIWGCSGKLICTTNVPWNSSWSNKTYSDIWDNMTWLQWDKEISNYTSIIYELIEESQNQQEKNEQDLLALDKWASLWNWFNITNWLWYIKIFIMIVGGLIGLRIVFAVLTIINRVRQGYSPLSFQTL
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MWVTVYYGVPVWRDADTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEIHLENVTENFNMWKNNMVKQMHKDIISLWDQSLQPCVKLTPLCVTLNCNRVNNSSSSNSTNNXXTSSNSTVSPGIKXEMMNCSFNMTXXVXXKKXKVSALFYRLDVXQIDSEQTNSTXYRLINCNTSTVTQACPKVTFEPIPIHYCAPAGFAILKCKDKNFTGTGPCXNVSTVQCTHGIRPVXTTQLLLNGSLAEERVMIRSENLTNNTXTILVQFQNPVRINCTRPSNNTRKSLRIGPGQTFYATGEVIGDIRRAHCNVSTQDWNDTLKEVVTQLRGHFKNKTIIFKNHAGGDLEIVTHSFNCGGEFFYCNTTDLFNSTWDKDGNGTVSSGSNGTITLQCRIKQIINMWQRVGQAMYAPPIQGVIRCDSNITGLLLTRDGGNGNDSQANETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRARRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MSKSSRGGRQIVASNRKARHNYSIIEVFEAGVALQGTEVKSLREGQASLADSFATIDDGEVWLRNAHIPEYRHGSWTNHEPRRNRKLLLHRRQIDTLVGKIREGNFALVPLSLYFAEGKVKVELALARGKQARDKRQDMARRDAQREVLRELGRRAKGMT

Annotated regions:
phrase: AGVALQGTEVKS
type: CONSERVED_SITE
name: SsrA-bd_prot_CS
description: SsrA-binding protein, conserved site
Protein sequence:
MGLTEGVFLILSGTQFTLGILVNCFIELVNGSSWFKTKRMSLSDFIITTLALLRIILLCIILTDSFLIEFSPNTHDSGIIMQIIDVSWTFTNHLSIWLATCLGVLYCLKIASFSHPTFLWLKWRVSRVMVWMLLGALLLSCGSTASLINEFKLYSVFRGIEATRNVTEHFRKKRSEYYLIHVLGTLWYLPPLIVSLASYSLLIFSLGRHTRQMLQNGTSSRDPTTEAHKRAIRIILSFFFLFLLYFLAFLIASFGNFLPKTKMAKMIGEVMTMFYPAGHSFILILGNSKLKQTFVVMLRCESGHLKPGSKGPIFS

Annotated regions:
Protein sequence:
MYAVFIAGGKQHRVEEGEVLRLEKIEVATGESVDFDQVLLVTKGDDVKIGAPYVEGAKVTAEVVSHGRADKVRIIKFRRRKHSMTRQGHRQWYTEVKITGIAG

Annotated regions:
phrase: VRIIKFRRRKHSMTRQGHRQWY
type: CONSERVED_SITE
name: Ribosomal_bL21_CS
description: Large ribosomal subunit protein bL21, conserved site
Protein sequence:
MGITGMTYMFTMVLSLIVLIFSASTVGFDYFQFTQQYQPAVCNSNPTPCNDPTDKLFTVHGLWPSNRNGPDPEKCKTTTMNSQKIGNMTAQLEIIWPNVLNRSDHVGFWEREWLKHGTCGYPTIKDDMHYLKTVIKMYITQKQNVSAILSKATIQPNGNNRSLVDIENAIRSGNNNTKPKFKCQKNTRTTTELVEVTLCSNRDLTKFINCPHGPPKGSRYFCPANVKY

Annotated regions:
phrase: FTVHGLW
type: ACTIVE_SITE
name: RNase_T2_His_AS_1
description: Ribonuclease T2, His active site 1
Protein sequence:
MNRRLPATLRELSECFRSKSLDPLTFTEHTLHRASDRAKHLNAFVRISSQTALQQAEASTQRHRSGSTLGPLDGATIAVKDNFCTRNVATTCASRMLESFVPTYSATVWERLERGGAVLVGKTNMDQFGMGSGTVDSIFGPTRNCWSESLEGERFRIAGGSSGGSAVAVASGVCFAALGSDTGGSTRNPASYCGVVGLKPTYGLLSRHGLIPLVNSMDVPGILTRTVKDCATVLNAIAGPDERDSTTVKKPFKPVELPESICLKGLRIGIPVEYHCEGLSEEVLHTWAKVADMLEDAGATVTSVSLPYTSASIFVYSILNQCEVSSNMSRYDGIEFGLRSDEDASTEQLYARSRAEGFNGVVKNRILTGNYFLLRKNYDKFFQKALQVRRLIAEDFDKAFTKVDFLLTPTTLSSAPLYEDFVQGTNRDQCAVQDFCTQPANMGGIPAISLPIRLSEHKLPISLQLMGPNFSEQNLLTVAKWIESQVEFEHLCATND

Annotated regions:
phrase: TEHTLHRASDRAKHLNAFVRISSQTALQQAEASTQRHRSGSTLGPLDGATIAVKDNFCTRNVATTCASRMLESFVPTYSATVWERLERGGAVLVGKTNMDQFGMGSGTVDSIFGPTRNCWSESLEGERFRIAGGSSGGSAVAVASGVCFAALGSDTGGSTRNPASYCGVVGLKPTYGLLSRHGLIPLVNSMDVPGILTRTVKDCATVLNAIAGPDERDSTTVKKPFKPVELPESICLKGLRIGIPVEYHCEGLSEEVLHTWAKVADMLEDAGATVTSVSLPYTSASIFVYSILNQCEVSSNMSRYDGIEFGLRSDEDASTEQLYARSRAEGFNGVVKNRILTGNYFLLRKNYDKFFQKALQVRRLIAEDFDKAFTKVDFLLTPTTLSSAPLYEDFVQGTNRDQCAVQDFCTQPANMGGIPAISLPIRLSEHKLPISLQLMGPNFSEQNL
type: DOMAIN
name: Amidase_dom
description: Amidase signature domain
Protein sequence:
MADFEKIKSIIVEQLGVDESEVTPEAHFINDLGADSLDTVELVMALEEEFGVEISDEDAEKIQTVGDVIKFIDKLKG

Annotated regions:
phrase: MADFEKIKSIIVEQLGVDESEVTPEAHFINDLGADSLDTVELVMALEEEFGVEISDEDAEKIQTVGDVIKFIDKL
type: DOMAIN
name: PP-bd_ACP
description: Phosphopantetheine binding ACP domain

phrase: DLGADSLDTVELVMA
type: PTM
name: Ppantetheine_attach_site
description: Phosphopantetheine attachment site

phrase: EKIKSIIVEQLGVDESEVTPEAHFINDLGADSLDTVELVMALEEEFGVEISDEDAEKIQTVGDVIKF
type: DOMAIN
name: PP-bd_ACP
description: Phosphopantetheine binding ACP domain
Protein sequence:
MFSLRNLPSLAPFVSAYASLTGYVMMIKPFLEMTIPPPLQNYMISYLNSFLHSTPSTLTLIIDDHIKNGMYNELYGAAQVYISTKVNHNAERLRISRDRSEKNVNIHFSVGEVVSDIYQGIEVKWRFCVDSNKSNMVHYFGEHFKLNPDRECVELSFEKKHTELVLNSYIPYVESKAKVINNERKILKMYSYCCMYLKWQSVNLEHPSTFDTMAMNEELKRSVMGDLDRFIRRKDFYKRVGKPWKRGYLLYGPPGTGKTSLVAAIANYLKFDIYDLQLASVREDADLRRLLLGTTNSSILLVEDIDCAVDLHTRLQPKTQDDTKGSSMLTLSGLLTCIDGLWSSCGDERIVIFTTTHKERLDPALLRPGRMDMHIHMGHCCFDVFKTLASNYLGLSHDDPHHLYPEIERLIKGEVLTPAQVAEELMKNEDPDVALEGLVKVLKRKRLELEKYDGETGRGGLRKPELQFFL

Annotated regions:
phrase: IPPPLQNYMISYLNSFLHSTPSTLTLIIDDHIKNGMYNELYGAAQVYISTKVNHNAERLRISRDRSEKNVNIHFSVGEVVSDIYQGIEVKWRF
type: DOMAIN
name: AAA_N_dom
description: AAA-type ATPase, N-terminal domain

phrase: YLLYGPPGTGKTSLVAAIANYLKFDIYDLQLASVREDADLRRLLLGTTNSSILLVEDIDCAVDLHTRLQPKTQDDTKGSSMLTLSGLLTCIDGLWSSCGDERIVIFTTTHKERLDPALLRPGRMDMHIH
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: WKRGYLLYGPPGTGKTSLVAAIANYLKFDIYDLQLASVREDADLRRLLLGTTNSSILLVEDIDCAVDLHTRLQPKTQDDTKGSSMLTLSGLLTCIDGLWSSCGDERIVIFTTTHKERLDPALLRPGRMDMHIHMGHC
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain
Protein sequence:
MVFGTGVDNVELSRIQKALTRSERFVEQVLTAVELEKYNSFQSTARKTEFLAGRWAAKEAFSKAYGTGFGKALGMHDLEIKNDELGKPFFTKHPFDGQVHLSISHSNLEAVAFVVLEKN

Annotated regions:
phrase: TGVDNVELSRIQKALTRSERFVEQVLTAVELEKYNSFQSTARKTEFLAGRWAAKEAFSKAYGTGFGKALGMHDLEIKNDELGKPFFTKHPFDGQVHLSISH
type: DOMAIN
name: 4-PPantetheinyl_Trfase_dom
description: 4'-phosphopantetheinyl transferase domain

phrase: FGTGVDNVELSRIQKALTRSERFVEQVLTAVELEKYNSFQSTARKTEFLAGRWAAKEAFSKAYGTGFGKALGMHDLEIKNDELGKPFFTKHPFDGQVHLSISHSNLEAVAFVVLE
type: DOMAIN
name: Ppantetheine-prot_Trfase_dom
description: Phosphopantetheine-protein transferase domain
Protein sequence:
MVALLFAGAFSLAFTLFLTPLFIKLFHRLQWGQFIRDDGPQTHHTKRGTATMGGIVIILASVLGYFVGHLLTWDGIRFDPVTPSGLLVVFMMVGLGFVGFLDDYLKTRKQQSLGLGGWQKIAGQVVVATVFAVLAITLRDPVSGLTPASTAISLFRDLPLDFMALGAVIGTGLFIVWICLIVASASNGVNVADGLDGLAAGASIFSIGSYVIIGFWQFNQSCDSVSSYQNEYRCYEVASPLDLAIIAASIVGALIGFLWWNTSPAQIFMGDTGSLGLGGALAALAILSRTELLLVFIGGLFVIVAGSVVLQRIYFKLTHGKRIFLMSPLHHHFELKGWAEVTVVVRFWIIAGLLVAAGVGTFYLEWITQ

Annotated regions:
phrase: NGVNVADGLDG
type: CONSERVED_SITE
name: PNAcMuramoyl-5peptid_Trfase_CS
description: Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site
Protein sequence:
MLNDTIVAISSPIGTGAIGVVRISGDHVKNIIDQALKRKKYTPKKMYYGWLYDKEGEKVDEITWVYHSQPHSYTGEDMLEIFCHGGKLITYAVLNTIIKYGARQALPGEFTKRAVLNGKMDLIKAEAVNNVITSETEISLKASFNQLKNAVSEKIKDIKNSLLNISAQIEVEMDYPDDIEFEDHDLKNKLVHIVNSMNQLLKEAENGIIAVEGVRTVIVGKPNSGKSTLLNALLRKDRAIVTDIPGTTRDTIEENLNINGIYIRLIDTAGIRYTEDTLERVGIERTINSIKNSHLILFVLDGTTPFTQEDELIYNKLNELGDKTVIIILNKSDSPNFTENNYLSLKQKNPNDFVIISAKNGAIKNLENKIYEKFFEKVNIEEPTLTNQRQKITLESSKEFVLNAINSLEKGFSNDIIMYDVRKALEKIYELSGENYTEELLDKIFSTFCVGK

Annotated regions:
phrase: EGVRTVIVGKPNSGKSTLLNALLRKDRAIVTDIPGTTRDTIEENLNINGIYIRLIDTAGIRYTEDTLERVGIERTINSIKNSHLILFVLDGTTPFTQEDELIYNKLNELGDKTVIIILNKSDSPNFTENNYLSLKQKNPNDFVIISAKNGAIKNLENKIYEK
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain

phrase: TVIVGKPNSGKSTLLNALLR
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: IERTINSIKNSHLILFVL
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: TIVAISSPIGTGAIGVVRISGDHVKNIIDQALKRKKYTPKKMYYGWLYDKEGEKVDEITWVYHSQPHSYTGEDMLEIFCHGGKLITYAVLNTIIKYGARQALPGEFTKRAVLNG
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal

phrase: DTIVAISSPIGTGAIGVVRISGDHVKNIIDQALKRKKYTPKKMYYGWLYDKEGEKVDEITWVYHSQPHSYTGEDMLEIFCHGGKLITYAVLNTIIKYGARQALPGEFTKRAVLN
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal

phrase: GVRTVIVGKPNSGKSTLLNALLRKDRAIVTDIPGTTRDTIEENLNINGIYIRLIDTAGIRYTEDTLERVGIERTINSIKNSHLILFVLDGTTPFTQEDELIYNKLNELGDKTVIIILNKSDSPNFTENNYLSLKQKNPNDFVIISAKNGAIKNLENKIYEKF
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain

phrase: RTVIVGKPNSGKSTLLNALLRKDRAIVTDIPGTTRDTIEENLNINGIYIRLIDTAGIRYTEDTLERVGIERTINSIKNSHLILFVLDGTTPFTQEDELIYNKLNELGDKTVIIILNKSDSPNFTENNYLSLKQKNPNDFVIISAKN
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: LIKAEAVNNVITSETEISLKASFNQLKNAVSEKIKDIKNSLLNISAQIEVEMDYPDDIEFEDHDLKNKLVHIVNSMNQLLKEAENGIIAVEGVRTVIVGKPNSGKSTLLNALLRKDRAIVTDIPGTTRDTIEENLNINGIYIRLIDTAGIRYTEDTLERVGIERTINSIKNSHLILFVLDGTTPFTQEDELIYNKLNELGDKTVIIILNKSDSPNFTENNYLSLKQKNPNDFVIISAKNGAIKNLENKIYEKFFEKVNIEEPTLTNQRQKITLESSKEFVLNAINSLEKGFSNDIIMYDVRKALEKIYELSGENYTEELLDKIFSTF
type: DOMAIN
name: MnmE_helical
description: MnmE, helical domain

phrase: TVIVGKPNSGKSTLLNALLRKDRAIVTDIPGTTRDTIEENLNINGIYIRLIDTAGIRYTEDTLERVGIERTINSIKNSHLILFVLDGTTPFTQEDELIYNKLNELGDKTVIIILN
type: DOMAIN
name: GTP-bd
description: GTP binding domain
Protein sequence:
MFSLQKKALQHIYMTPENASELTKDLLQHLGLYWNGPIIKMDTVVYLHNKIFSNRSVLKYALAKQANITIIKTLVLWVEPEYALAQALKHNRKDVLECIFSYHLTTPKYHHIMHLTSSQELFEFFHLFICKSKNYNARMECLLYAATLYNFPNILEKNREYIIRHSIGNSLFAIACKERHIHLIAWFVTAGVLDTYDDSTLFNTAFKLGDYSLLEVACDLPIIYPDYLIISMMQTAIQKNYFRFFKKLLTHFNIYRQIIITDAAYYNRRKILLLLLNQNIFNNFAILCALSAAIKGHASKKTLNLLISQLDSQMTVVDSVYYSIIKYNNIDCIPLLMQIKTFKIETLISIAVHGNNINIIAACKAFLPKDTLYHLVLKMAIVSRNYKLFKLYTEKENPMYIFTTIKAIISNLVNYTVVQAVAIEYLRKFHQERQLPIVPLLMVLAEHNYITKFKKTCYAANMSDQNVKRALIKCLFIASQKNYCQIFKYCFGSLLKVLSKHERVKFFNSVVFAKKLASYYDHQNMIHLIDSLIERFRYLIKD

Annotated regions: