nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSKLITIERHILEQQKNFPEATGELTDLLSDVAFAAKLVRREVVRAGLVDILGFAGSTNVQGEEVKKLDLFANDKIINAIGQHGRFAIMGSEENEEIITPPNNENGSYALLFDPLDGSSNIDVNVSVGTIFSIYKIKNSDPRKADISDCLQKGSEQVAAGYVIYGSSVVMVYTTGNGVHGFTYDPTIGEFLLSHENIVTPKHGKYYSINEGSYAQFNDTTKKYLDYIKEEDSATGRPYSTRYIGSLVADFHRNLLTGGVFVYPPTTNHPNGKLRLMYEGNPLAYICEQAGGRATDGRRRILDIDPSELHQRTPLYIGSEDDVRVAEEFEQGIR

Annotated regions:
phrase: ITIERHILEQQKNFPEATGELTDLLSDVAFAAKLVRREVVRAGLVDILGFAGSTNVQGEEVKKLDLFANDKIINAIGQHGRFAIMGSEENEEIITPPNNENGSYALLFDPLDGSSNIDVNVSVGTIFSIYKIKNSDPRKADISDCLQKGSEQVAAGYVIYGSSVVMVYTTGNGVHGFTYDPTIGEFLLSH
type: DOMAIN
name: FBPase_N
description: Fructose-1-6-bisphosphatase class I, N-terminal

phrase: PKHGKYYSINEGSYAQFNDTTKKYLDYIKEEDSATGRPYSTRYIGSLVADFHRNLLTGGVFVYPPTTNHPNGKLRLMYEGNPLAYICEQAGGRATDGRRRILDIDPSELHQRTPLYIGSEDDVRVAEE
type: DOMAIN
name: FBPase_C_dom
description: Fructose-1-6-bisphosphatase class 1, C-terminal
Protein sequence:
MGVNLKEIVDPVKKEIEFKQLFGKVIAIDAFNALYQFLFSIRQDGEPLRDSKGRITSHLSGLFYRTINLLEYGIKPIYVFDGTPPKFKIVAWEKRKKHKEQLESKYKEALKKGNIQEAIKYAKSLGKLDSYMVEEAKKLLEAMGIPYVQAPSEGEAEAAYLTKKGVSDYCGSQDYDSLLFGSPRVVRNITISEKRKLPGKNIYVEVKPEVIELEAVLNYWKITREQLIAIAMLLGTDYNEKVPGIGPKTAIEIVKRFGDPIKVIEYYKIPNGKEIFEFFLNPPVIDFEPKWGKPNKELIFKILVEEHDFNPERVERAIERLEKALNKINQKTLFSFFGS

Annotated regions:
phrase: REQLIAIAMLLGTDYNEKVPGIGPKTAIEIVKR
type: CONSERVED_SITE
name: HhH2
description: Helix-hairpin-helix motif, class 2

phrase: EAMGIPYVQAPSEGEAEAAYLTKKGVSDYCGSQDYDSLLFGSPRVVRNITISEKRKLPGKNIYVEVKPEVIELEAVLNYWK
type: DOMAIN
name: XPG-I_dom
description: XPG-I domain

phrase: IKPIYVFDGTPPKF
type: CONSERVED_SITE
name: XPG_CS
description: XPG conserved site

phrase: MGVNLKEIVDPVKKEIEFKQLFGKVIAIDAFNALYQFLFSIRQDGEPLRDSKGRITSHLSGLFYRTINLLEYGIKPIYVFDGTPPKFKIVAWEKRKKHKE
type: DOMAIN
name: XPG_DNA_repair_N
description: XPG, N-terminal

phrase: MGVNLKEIVDPVKKEIEFKQLFGKVIAIDAFNALYQFLFSIRQDGEPLRDSKGRITSHLSGLFYRTINLLEYGIKPIYVFDGTPPKFKIVAWEKRKKHKEQ
type: DOMAIN
name: XPG_DNA_repair_N
description: XPG, N-terminal

phrase: GIPYVQAPSEGEAEAAYLTKKGVSDYCGSQDYDSLLFGSPRVVRNITISEKRKLPGKNIYVEVKPEVIELEAVLNYWKITREQLIAIAMLLGT
type: DOMAIN
name: XPG-I_dom
description: XPG-I domain
Protein sequence:
MATGDKPRVVLGVSGGIAAYKSCDVLRSLTETGHHVDVVPTESALRFVGSATFEALSGNPVTDGVFSDVPSVRHVRLGQQADLVLVVPATADLMARMAHGNADDLLTATLLTAHCPVAIAPAMHTEMWEHAATRANVATLRERGVTVIGPAIGRLTGKDTGPGRLAEPNEIADLARLLIERPNALPADLDGLNVVVTAGGTRESLDPVRFLTNRSSGKQGYAIARVAAARGANVTMIAANVDFPEPAGAQVVRVSSADQLAEAVRREMGAADVIVMAAAVSDFRPAAYSEAKIKKSELEPDAIELTKNPDILVGLVTSRAQGDIPADCTIVGFAAETGDKQHSVEEYGRAKMARKGADMMVVNSVGDGGAFESDHNSGWILDAVGADEPIEHGSKYALAAQLWDHIGTRRSAR

Annotated regions:
phrase: DGLNVVVTAGGTRESLDPVRFLTNRSSGKQGYAIARVAAARGANVTMIAANVDFPEPAGAQVVRVSSADQLAEAVRREMGAADVIVMAAAVSDFRPAAYSEAKIKKSELEPDAIELTKNPDILVGLVTSRAQGDIPADCTIVGFAAETGDKQHSVEEYGRAKMARKGADMMVVNSVGDGGAFESDHNSGWI
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal

phrase: RVVLGVSGGIAAYKSCDVLRSLTETGHHVDVVPTESALRFVGSATFEALSGNPVTDGVFSDVPSVRHVRLGQQADLVLVVPATADLMARMAHGNADDLLTATLLTAHCPVAIAPAMHTEMWEHAATRANVATLRERGVTVIGPAIGRLTGKDTGPGRLAEPNEIA
type: DOMAIN
name: Flavoprotein
description: Flavoprotein
Protein sequence:
MAPYCSSLRSALLVLALCALSPSHAATASRGRAQERAPQSRVSETRPSTMVVEHPEFLKAGKEPGLQIWRVEKFDLVPVPPNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESSTFQGYFKSGLKYKKGGVASGFKHVVPNEVVVQRLFQVKGRRVVRATEVPVSWDSFNNGDCFILDLGNNIYQWCGSGSNKFERLKATQVSKGIRDNERSGRAQVHVSEEGSEPEAMLQVLGPKPDLPQGTEDTAKEDAANRRLAKLYKVSNSGGSMSVSLVADENPFAQSALRSEDCFILDHGRDGKIFVWKGKQANMDERKAALKTASDFISKMQYPRQTQVSVLPEGGETPLFKQFFKNWRDPDQTDGPGLSYLSSHIANVERVPFDAATLHTSTAMAAQHGMDDDGTGQKQIWRIEGSNKVLVDPATYGQFYGGDSYIILYNYRHGGRQGQIIYNWQGAQSTQDEVAASAILTAQLDEELGGTPVQSRVVQGKEPAHLMSLFGGKPMIIYKGGTSRDGGQTTPASTRLFQVRASSSGATRAVEVMPKAGALNSNDAFVLKTPSAAYLWVGTGASDAEKTGALELLKVLRAQHVQVEEGSEPDGFWEALGGKTAYRTSPRLKDKKMDAHPPRLFACSNRIGRFVIEEVPGELMQEDLATDDVMLLDTWDQVFVWVGKDSQEEEKTEALTSAKRYIETDPANRDRRTPITVVRQGFEPPSFVGWFLGWDDDYWSV

Annotated regions:
phrase: IEEVPGELMQEDLATDDVMLLDTWDQVFVWVGKDSQEEEKTEALTSAKRYIETDPANRDRRTPITVVRQGFEPPSF
type: DOMAIN
name: Gelsolin-like_dom
description: Gelsolin-like domain

phrase: AVEVMPKAGALNSNDAFVLKTPSAAYLWVGTGASDAEKTGALELLKVLRAQHVQVEEGSEPDGF
type: DOMAIN
name: Gelsolin-like_dom
description: Gelsolin-like domain

phrase: ADENPFAQSALRSEDCFILDHGRDGKIFVWKGKQANMDERKAALKTASDFISKMQYPRQTQVSVLPEGGETPL
type: DOMAIN
name: Gelsolin-like_dom
description: Gelsolin-like domain

phrase: VVRATEVPVSWDSFNNGDCFILDLGNNIYQWCGSGSNKFERLKATQVSKGIRDNERSGRAQVHVSEEGSEPEA
type: DOMAIN
name: Gelsolin-like_dom
description: Gelsolin-like domain

phrase: NKVLVDPATYGQFYGGDSYIILYNYRHGGRQGQIIYNWQGAQSTQDEVAASAILTAQLDEELGGTPVQSRVVQGKEPAHL
type: DOMAIN
name: Gelsolin-like_dom
description: Gelsolin-like domain

phrase: KFDLVPVPPNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESST
type: DOMAIN
name: Gelsolin-like_dom
description: Gelsolin-like domain
Protein sequence:
MGYRVVVVGATGNVGREMLNILAEREFPCDEIAALASSRSQGSEIEYGDTGRMLKVKNVDHFDFTGWDIALFAVGSEPTKIHAPRAAAAGCVVIDNSSLYRMDPDVPLIVPEVNPEAIDGYKAKNIIANPNCSTAQMVVALKPLHDAAKITRVVVSTYQSTSGSGKAGMDELFEQSRAIFVGDPVEPRKYTKQIAFNVIPHIDVFLDDGFTKEEWKMVVETKKILDPKIKVVATCVRVPVFVGHSEAINIEMENELSAEQAQDILREAPGVMLIDKREDGGYVTPIECVGDGATYVSRVREDPTVDNGLVLWCVADNLRKGAALNAVQIAELLGRRHLKKG

Annotated regions:
phrase: RVVVVGATGNVGREMLNILAEREFPCDEIAALASSRSQGSEIEYGDTGRMLKVKNVDHFDFTGWDIALFAVGSEPTKIHAPRAAAAGCVVIDNSSLYRMDPDVPLIVPEVNPEAIDG
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: LKPLHDAAKITRVVVSTYQSTSGSGKAGMDELFEQSRAIFVGDPVEPRKYTKQIAFNVIPHIDVFLDDGFTKEEWKMVVETKKILDPKIKVVATCVRVPVFVGHSEAINIEMENELSAEQAQDILREAPGVMLIDKREDGGYVTPIECVGDGATYVSRVREDPTVDNGLVLWCVADNLR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: RVVVVGATGNVGREMLNILAEREFPCDEIAALASSRSQGSEIEYGDTGRMLKVKNVDHFDFTGWDIALFAVGSEPTKIHAPRAAAAGCVVIDNSSLYRMDPDVPLIVPEVNPEAI
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MLNIIHRLKSGMFPALFFLTSASVLAHPLTIPPGHWLEGMAVGVTELSGTLYVRDVSWQWQPRAVRMSSPDAVQAGLAAGKGGMVSESRRGQDFYILGGHTTSLTTARSGLQPSVTLLQVAPSSPRIAARGELARGQVRYGEITFTLRHLLAWQDNITGGQGWSVVSGEVTPEAEKQVKRQLWQVNGYEWTPDYAGLTARPDAFISGAESLLSQENGSQHIAGAWVTSLSDVRVNFPGAEEPVKRWQGNLTPVVVYF

Annotated regions:
Protein sequence:
MAKIIAINAGSSSLKFQLLAMPEETVIAKGLVERIGLKKSIFTIEANGQQHELTEDIPDHAAAVKLLLKDLTGRGIIASLEEIEGIGHRVVHGGEKFNDSVVITDEVLQGIEEVSELAPLHNPANITGIKAFKEVLPNVPAVAVFDTAFHQTMPESAFLYSLPYEYYEKYGIRKYGFHGTSHKYVTHRAAELMETPIEELRILSCHLGNGASIAAVKGGKSIDTSMGFTPLAGVTMGTRSGNIDPALIPYIMEKTGQSVEEVVATLNKKSGLLGITGFSSDLRDIEAAAKEGDERAQVALDVFASRIHKYVGSYAARMGGLDAIVFTAGIGENSATIRERVLKGLSFMGVDVDLEKNNVRGKEAFIEKAGAPVKIIVIPTNEEVMIARDTVRLTS

Annotated regions:
phrase: ILSCHLGNGASIAAVKG
type: CONSERVED_SITE
name: Aliphatic_acid_kinase_CS
description: Aliphatic acid kinase, short-chain, conserved site

phrase: IIAINAGSSSL
type: CONSERVED_SITE
name: Aliphatic_acid_kinase_CS
description: Aliphatic acid kinase, short-chain, conserved site
Protein sequence:
MDSAPPSPSPSPAPAYAELHCLTNFSFQRGASHPEELVARAAEAGYTALAITDECSLAGVVRAHQQLRRLARPLKLLIGSELRLVDGLRVVLLATDRAAYGRLARLITIGRRAATKGRYQLTCADLDRGIPGCLALVVPPDDRILDAAALVADARWVGERFPDAAWLAVELACGPDDGRRLEALLAIASAAGLPPVAATGALMHDPSRRALADVLAALRLRVTIAEAGRALAPNAERALHERAVLARRYPAELLAETLRIVARCHFRLDELRYEYPAELVPDGETPASWLRRLVEDGLRWRHGRPQDDLAPPKVRAQVEHELALIAELGFEAYFLTVEDLVRFARGRGILCQGRGSAANSVICWALGITEVDPELGIMLVERFISKERDEPPDIDVDFEHERREEVIQYVYRKYGRERAALAATVIRYRARSALRDVGRALGLPPGQLERLARDRFWFDAGRIRPERLREAGFDPASPGVQRLATLTEALVGFPRHLSQHVGGFVIARGRLDELVPVENAAMPERTVIQWDKDDLDALGLLKIDVLALGMLSALRRSLALVSTWRGRPFTLADIPREAPEVYRMLSEADSIGVFQIESRAQMTMLPRLKPARFYDLVVQVAIVRPGPIQGGMVHPYLQARARIERDEPVSYPQPHCPDADADGTCVPRPDDVRRVLERTLGVPIFQEQVMQLAVVAAGFTPGEADQLRRAMGAFRRHGELERYRAKLLAGMAARGYRAEFAERLCDQIEGFGSYGFPESHAASFALLV

Annotated regions:
phrase: AELHCLTNFSFQRGASHPEELVARAAEAGYTALAITDECSLAGVVRAHQQLRRLARPLKLLIGSELRLV
type: DOMAIN
name: Pol/His_phosphatase_N
description: Polymerase/histidinol phosphatase, N-terminal

phrase: WLRRLVEDGLRWRHGRPQDDLAPPKVRAQVEHELALIAELGFEAYFLTVEDLVRFARGRGILCQGRGSAANSVICWALGITEVDPELGIMLVERFISKERDEPPDIDVDFEHERREEVIQYVYRKYGRERAALAATVIRYRARSALRDVGRALGLPPGQLERLARDRFWFDAGRIRPERLREAGFDPASPGVQRLATLTEALVGFPRHLSQHVGGFVIARGRLDELVPVENAAMPERTVIQWDKDDLDALGLLKIDVL
type: DOMAIN
name: DNA_pol3_alpha_NTPase_dom
description: Bacterial DNA polymerase III, alpha subunit, NTPase domain

phrase: MLSALRRSLALVSTWRGRPFTLADIPREAPEVYRMLSEADSIGVFQIESRAQMTMLPRLKPARFYDLVVQVAIVRPGPIQGGMVHPYLQARARIERDEPVSYPQPHCPDADADGTCVPRPDDVRRVLERTLGVPIFQEQVMQLAVVAAGFTPGEADQLRRAMGAFRRHGELERYRAKLLAGMAA
type: DOMAIN
name: DNA_pol3_finger
description: DNA polymerase III alpha subunit finger domain

phrase: ELHCLTNFSFQRGASHPEELVARAAEAGYTALAITDECSLAGVVRAHQQLRRLARPLKLLIGSELRLVDGLRVVLLATDRAAYGRLARLITIGRRAATKG
type: DOMAIN
name: PHP_dom
description: PHP domain
Protein sequence:
MSWQAYVDDHLMCDLEGNPGHHLAAAAILGQDGSVWAQSTAFPQFKPDEINGILTDFNEPGHLAPTGLHLGGAKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMVVERLGDYLLEQGL

Annotated regions:
phrase: MSWQAYV
type: CONSERVED_SITE
name: Profilin_CS
description: Profilin conserved site
Protein sequence:
MGEEAAMATMESAYHDELAPAAAPAPAKGGGSKKKRKQQKREEKRKECRLVSYHELPDYMKENEFILDYYRSEWPILNALLSLFSWHNETINIWTHLLGFVLFFGLTVLHLGQYFPQVADLIGHLSWPISKVAENVSSNIGDVLSGAASFMQASPASSAGAMAAAWPVTAAAAATTRWPFFVFLAGAMFCLLSSAACHLLSCHSHRLNLFLIRLDYTGIAVMIVVSFFPPIYYIFQCEPRWQVVYLSAITAAGVATVYALMSPRLSAARYRAHRALLFVAMGLSGVVPAAHAVAVNWHEPRRNVTLAYEGAMAASYLAGTAFYLTRVPERWRPGMFDLCGHSHQIFHALVIAGALAHYAAAIVFIQARDEMGCPAP

Annotated regions:
Protein sequence:
IKTNHPANGMYRINLPLRPISSGGSQPADTGECSIIGEWYCHKLQESLLSSASGFKNYRGILNWCVVMLVLSNARLFLENLLRYGILVDPIQVVSLFLKDPYSWPAACLVIVSNVFILVALYTERKLAMGTFSEKLGLLIHIINLTVILCFPMLTVLMVPSVTPVGGAFALGSYTILFLKLYSYKDVNRWCRERLQVKARGPSPPSADGAVHVSYPGNLAFKNLYYFVSAPTLCYELNFPRSQSVRMGFLLRRLFEMVGENLFLFRCFFQWTKRYDTNCQCDCDMDYSRMIERLLRLAVPNHFLWLIFFYWFFHSSMNFVAELLRFGDREFYRDWWNSESVTYFWQNWNIPVHKWCIRHFYKPLLRKGASKLLSQSAVFFASAFFHEYLVSVPLRMFRLWAFMGMMAQLPLAWFVGRFLRGNYGNAAVWLSLIIGQPIAVLMYVHDYYVINHLEEAADPGAL

Annotated regions:
Protein sequence:
MPAGKKITVGITGGIAVYKAAELVSSLVKAGADVHVAMTSAAREFMTPLTFEVLTGNPVHGELFQAGSEGGVLHIDLAQQAHALVIVPATANIIGKAAGGIADDLVSTLILAASCPVLFCPAMNVVMYQNPIVRQNIRKLKEFGYHFVEPGEGRLACGTTGKGRLADQATLLHSIEKLVTPQDLAGLDVLVTAGPTREPLDPVRYLSNRSSGKMGYALARAAFLRGARVRLVTGPAHLMPPPGVEVQRVETAGEMYEAVLQHFDSVDLVIKAAAVADYRPGEVSPQKIKKQGQAMQIELARNPDILAELGRRKKAHQLLVGFAAETNDLEQNALAKLTGKNLDLLVANDVTLPGAGFDHDTNVVRIFGRDGVVEALPLMDKNRVAQKILDRAAKLLQSRQGAK

Annotated regions:
phrase: LAGLDVLVTAGPTREPLDPVRYLSNRSSGKMGYALARAAFLRGARVRLVTGPAHLMPPPGVEVQRVETAGEMYEAVLQHFDSVDLVIKAAAVADYRPGEVSPQKIKKQGQAMQIELARNPDILAELGRRKKAHQLLVGFAAETNDLEQNALAKLTGKNLDLLVANDVTLPGAGFDHDTNVVR
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal

phrase: KKITVGITGGIAVYKAAELVSSLVKAGADVHVAMTSAAREFMTPLTFEVLTGNPVHGELFQAGSEGGVLHIDLAQQAHALVIVPATANIIGKAAGGIADDLVSTLILAASCPVLFCPAMNVVMYQNPIVRQNIRKLKEFGYHFVEPGEGRLACGTTGK
type: DOMAIN
name: Flavoprotein
description: Flavoprotein
Protein sequence:
MRVKGTQMSWLNLWRWGTLILGLGIICSASDKLWVTVYYGVPVWKDANTTLFCASDAKAHSTEVHNVWATYACVPTDPNPQEIHLENVTEYFNMWKNNMAEQMQEDVISLWDQSLKPCVKLTPLCVTLNCTNATVTNPNNATTDHSTIGNITDEVRNCSFNMTTVIRDKQQQIHALFYKLDIVPIEDNNNNSNKSNSSNESSDSSMYRLINCNTSVIKQACPKVSFDPIPIHYCTPAGYAILKCNDKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEDRIIIRSENLTNNAKTIIVHLNKSVEINCTRPSNNTRTSANIGPGQVLFYRAGDITGDIRKAYCEVNRTHWYKALKQVARELKERFANITGKSNITFRPPSGGDLEITMHHFNCRGEFFYCNTSLLFNSTWGNETKENETIGNNTGNIILPCRIKQIINMWQGAGQAMYAPPIRGKINCISNITGILLTRDGGNNNDTEEIFRPGGGNIKDNWRSELYKYKVVQIEPLGIAPTRAKRRVVEREKRAVGIGAMIFGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQKFLGLWGCSGKIICTTAVPWNSTWSNKSFEQIWNNMTWTEWEREISNYTDLIYDILTESQNQQDKNEKELLELDKWASLWNWFDITKWLWYIKIFIMIVGGLIGLRIVFTVLSIVNRVRQGYSPLSFQTPTHHQREADRPERIEEEGGEQGRDRSVRLVSG

Annotated regions:
phrase: VQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQKFLGLWGCSGKIICTTAVPWNSTWSNKSFEQIWNNMTWTEWEREISNYTDLIYDILTESQNQQDKNEKELLELD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKDANTTLFCASDAKAHSTEVHNVWATYACVPTDPNPQEIHLENVTEYFNMWKNNMAEQMQEDVISLWDQSLKPCVKLTPLCVTLNCTNATVTNPNNATTDHSTIGNITDEVRNCSFNMTTVIRDKQQQIHALFYKLDIVPIEDNNNNSNKSNSSNESSDSSMYRLINCNTSVIKQACPKVSFDPIPIHYCTPAGYAILKCNDKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEDRIIIRSENLTNNAKTIIVHLNKSVEINCTRPSNNTRTSANIGPGQVLFYRAGDITGDIRKAYCEVNRTHWYKALKQVARELKERFANITGKSNITFRPPSGGDLEITMHHFNCRGEFFYCNTSLLFNSTWGNETKENETIGNNTGNIILPCRIKQIINMWQGAGQAMYAPPIRGKINCISNITGILLTRDGGNNNDTEEIFRPGGGNIKDNWRSELYKYKVVQIEPLGIAPTRAKRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: MGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQKFLGLWGCSGKIICTTAVPWNSTWSNKSFEQIWNNMTWTEWEREISNYTDLIYDILTESQNQQDKNEKELLELDKWASLWNWFDITKWLWYIKIFIMIVGGLIGLRIVFTVLSIVNRVRQGYSPLSFQTPT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MERKSNTVFRNVAIAGVIILAIVGFSFFTGDDRDYAEVDTSVALAQVDAGNVKEALIEDREQQLRLTLETPIAPEDGADETDKLLAKYPERAADQVFDRVAAAEPEKYDTAVNQQGFLSQMLSFLLPMLILFGLLFYFMSRMQGGKGGLFGVGKSRAVEFTKDMPQTTFADVAGEDEAVEELNEIKDFLQNPARYERLGAKIPRGVLLYGPPGTGKTLLARAVAGEAGVPFYSISGSDFVEMFVGVGASRVRDLFEKAKQNAPCIVFVDEIDAVGRHRGSGTGGGHDEREQTLNQLLVEMDGFSDRETVIMIAATNRPDVLDPALLRPGRFDRQVPVTNPDLKGREAILAVHSAGKPLAENVNMTSLARRTIGMSGADLANVLNEGALLAARLGRDEIDIDILEEATDRVVGGPRRKHRVISEHEKKVTAYHESGHALAAWAMEDLEPVHKVTILARGRTGGHALVVPEDDKSLMTRADMIARVVMAMGGRAAEEYVFGEPTSGASSDIEQATRIARTMVAEYGMSAKLGAVKYGGEGGDPFLGRGGSAAGEYSPEVAKIIDDEVRRIIDSAHTEAWQVLESNRDILDAVAGELLEKETLRQDDLERLFADVVKRPRITEFDDFGGRIPSARPPIKTPGELAKERGEPWPPPVTDPFAMPVLPAGRDAEDARDPGEADGPGDDGGDRNGVGAPVGMPGGGSGRGVPAGGGQRPTGIPAYGTPPPPGWSAPGWPPRQPAHRGDRGPSGAETTRLPAAPEGLQRNDGSGS

Annotated regions:
phrase: IPRGVLLYGPPGTGKTLLARAVAGEAGVPFYSISGSDFVEMFVGVGASRVRDLFEKAKQNAPCIVFVDEIDAVGRHRGSGTGGGHDEREQTLNQLLVEMDGFSDRETVIMIAATNRPDVLDPALLRPGRFDRQVPVTNP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VLLYGPPGTGKTLLARAVAGEAGVPFYSISGSDFVEMFVGVGASRVRDLFEKAKQNAPCIVFVDEIDAVGRHRGSGTGGGHDEREQTLNQLLVEMDGFSDRETVIMIAATNRPDVLDPALLRPGRFDRQVP
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: RVISEHEKKVTAYHESGHALAAWAMEDLEPVHKVTILARGRTGGHALVVPEDDKSLMTRADMIARVVMAMGGRAAEEYVFGEPTSGASSDIEQATRIARTMVAEYGMSAKLGAVKYGGEGGDPFLGRGGSAAGEYSPEVAKIIDDEVRRIIDSAHTEAWQVLESNRDILDAVAGELLEKETLRQDDLER
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: VIMIAATNRPDVLDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: NVNMTSLARRTIGMSGADLANVLNEGALLAARLGRDEIDIDI
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain
Protein sequence:
MKTKEEFHRIEISKFTEDLREAFGYKIQYRQDLVLVNIRGCNGAGKSTVPMQMLQTDPGAFMLTLDGKDKATVFPSYGFVAMGRYFSKTGGLDGFKNNEETLKVLKLLWELPFSIIMEGVISSTIFSTYCDLFKELEQRNNPKRAVGVLNLLPPFEVCLERIKKRTPEKFDSIKKDQIEGKWRTVNRNAQKFRDAGVTSWDEDNSVIDINDTVSWFFSSIKNNLQPEFTGLRLGVRFPTEEPVKALKKAEKGVKRGKKGRKTSPVAKTLDDNGDGAFLRSLKREIRPHWDPKYLNTPDDNVRLRRDPETGQTLWDMYFINLVERQNIWYRRVIQGKSKPWTDDPVMSTYHFTNVDRRLDRVTLHYIDKVLCNLEDSYESKKFLLLNTFIYRLFVRPETTDAMGYIFPETFEEDWERAKAALRARRESGEPVFTDAYFVNDLKSANPDRANSSNKTENAIHLIQFIIDHLDELAEFTFNPKNSMEEVIEKFTMIPAVGNFNAYEVALDLGIVKEMTGIDFVDWTPDHYANVGPGCKKGIEYVFEDLGNMSHLDIVFFITSVYKGELERLGLEYKYQEGCKELDLRALEGWCCEMSKYFNYYATERGYDWAKGKRPKKKMNLRTDDVSYLNPRISNLVK

Annotated regions:
phrase: LWDMYFINLVERQNIWYRRVIQGKSKPWTDDPVMSTYHFTNVDRRLDRVTLHYIDKVLCNLEDSYESKKFLLLNTFIYRLFVRPETTDAMGYIFPETFEEDWERAKAALRARRESGEPVFTDAYFVNDLKSANPDRANSSNKTENAIHLIQFIIDHLDELAEFTFNPKNSMEEVIEKFTMIPAVGNFNAYEVALDLGIVKEMTGIDFVDWTPDHYANVGPGCKKGIEYVFEDLGNMSHLDIVFFITSVYKGELERLGLEYKYQEGCKELDLRALEGWCCEMSKYF
type: DOMAIN
name: HMUDK_hel
description: 5-hmdU DNA kinase, helical domain
Protein sequence:
MIPANASARKGPEGKYPLHYLVWHNRHRELEKEVRAGQVDIEQLDPRGRTPLHLATTLGHLECARVLLAHGADVGRENRSGWTVLQEAVSTRDLELVQLVLRYRDYQRVVKRLAGIPMLLEKLRKAQDFYVEMKWEFTSWVPLVSKICPSDTYKVWKSGQNLRVDTTLLGFDHMTWQRGNRSFVFRGQDTSAVVMEIDHDRRVVYMETLALAGQDRELLLAAAQPSEEQVLSRLTAPVVTTQLDTKNISFERNKTGILGWRSEKTEMVNGYEAKVYGASNVELITRTRTEHLSEQHKGKVKGCKTPLQSFLGIAEQHGGPQNGTLITQTLSQANPPAITAEEYFNPNFELGNRAMGRPMELTTKTQKFKAKLWLCEEHPLSLCEQVAPIIDLMAVSNALFAKLRDFITLRLPPGFPVKIEIPIFHILNARITFGNLNGCDEPVPSVRGSPGSETPSPGSDSSSVSSSSSTTSCRACEISPALFEAPRGYSVLGGQREAVPRDEDDDLLRFAIQQSLLEAGSEYDQVTIWEALTNSKPGTHPMSYEGRRQDRSAPPTPQRQPMPPAPVPSPRPSPGPGSSSHVFRSYDEQLRLAMELSAQEQEERRRRVRQEEEELERILRLSLTEQ

Annotated regions:
phrase: RGRTPLHLATTLGHLECARVLLAHGADVGREN
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: RGRTPLHLATTLGHLECARVLLAHGADVG
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: EGKYPLHYLVWHNRHRELEKEVRAGQVDIE
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: SGWTVLQEAVSTRDLELVQLVLRYRDYQR
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: SYDEQLRLAMELSAQEQEE
type: CONSERVED_SITE
name: UIM_dom
description: Ubiquitin interacting motif

phrase: EDDDLLRFAIQQSLLEAGS
type: CONSERVED_SITE
name: UIM_dom
description: Ubiquitin interacting motif

phrase: SYDEQLRLAMELSAQEQEE
type: CONSERVED_SITE
name: UIM_dom
description: Ubiquitin interacting motif

phrase: RVDTTLLGFDHMTWQRGNRSFVFRGQDTSAVVMEIDHDRRVVYMETLALAGQDRELLLAAAQPSEEQVLSRLTAPVVTTQLDTKNISFERNKTGILGWRSEKTEMVNGYEAKVYGASNVELITRTRTEHLSEQHKGKVKGCKTPLQSFLGIAEQHGGPQNGTLITQTLSQANPPAITAEEYFNPNFELGNRAMGRPMELTTKTQKFKAKLWLCEEHPLSLCEQVAPIIDLMAVSNALFAKLRDFITLRLPPGFPVKIEIPIFHILNARITFGNLNGCDEPVPSVRGSPGSETPSPGSDSSSVSSSSSTTSCRACEISPALFEAPRGY
type: DOMAIN
name: ANKRD13_C
description: Ankyrin repeat domain-containing protein 13, C-terminal

phrase: LHYLVWHNRHRELEKEVRAGQVDIEQLDPRGRTPLHLATTLGHLECARVLLAHGADVGRENRSGWTVLQEAVSTRDLELVQLVLR
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat
Protein sequence:
MARYTGATCKLCRREGMKLFLKGDRCYTDKCAFVRRSYAPGQHGASRKKLSNYGTQLREKQKAKRIYGVLEGQFRNTYERAEKMRGIAGENLLKLLEMRLDNVVYRLGYGASRTEARQLVNHGHFLVNGKKVDIASFKVSVNDVITVCEKSRGSERFKMFAENPKALPKWLEANVENFEGKVVAEPAREDIDVPVNETLIVELYSK

Annotated regions:
phrase: MRLDNVVYRLGYGASRTEARQLVNHGHFLVNGKKVDIASFKVSVNDV
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: MRLDNVVYRLGYGASRTEARQLVNHGHFLVNGKKVDIASFKVSVNDVITVCEKSRGSERF
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: RYTGATCKLCRREGMKLFLKGDRCYTDKCAFVRRSYAPGQHGASRKKLSNYGTQLREKQKAKRIYGVLEGQFRNTYERAEKMRGIAGENLLKLL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: RYTGATCKLCRREGMKLFLKGDRCYTDKCAFVRRSYAPGQHGASRKKLSNYGTQLREKQKAKRIYGVLEGQFRNTYERAEKMRGIAGENLLKLL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: LEMRLDNVVYRLGYGASRTEARQL
type: CONSERVED_SITE
name: Ribosomal_uS4_CS
description: Small ribosomal subunit protein uS4, conserved site
Protein sequence:
MQLLLIHSDYIEYETKKQTPVAEKIEESLKSGRLEEALTAFTAVESVDEANPEEAIKKAVSEIEKVAAQVKTNRIMLYPYAHLSSDLSSPKVAVQVLKGMEAALSSRYEVKRAPFGWYKAFTVSCKGHPLSELSRSIRPEGAAKAEVKTETCEKEEVVSEALKAEGTARSYWRILTPDGELHEVEGFDLTPYPKLQQFVNYEISKSRAVERAPPHVELMRRLELADYEPGSDSGNMRYYPKGRLVKSLLENYVLDVATEFGAMEVETPLMYDMNHPTLKKYLDRFPARQYSIESDKRHMFLRFAACFGQFLMNHDMTISYKNLPLRMIEMTRYSFRKEQRGELVGLRRLRAFTMPDMHTLCEDMDQAVNQFKEQYDLCISVLENVGIHINDYEVAIRFTRDFYEANKDLVVNMAKTVNKPVLVEMWDTRFFYFVLKFEFNFVDALAKASALSTVQIDVENAERYDISYVNADGKLERPTVLHCSPSGAIERCIYALLEKAAMETEEGKVPMLPVWLSPTQVRIVPISEKHIAFAEEVAKKLDFRVDVDDRDLSIGKKVREAGREWVPYVVVIGDKEMEESTINVTIREESGQDKPKKVQMTPEELNARIKEETSGKPYRKLPLAKYLSARPKFL

Annotated regions:
phrase: PHVELMRRLELADYEPGSDSGNMRYYPKGRLVKSLLENYVLDVATEFGAMEVETPLMYDMNHPTLKKYLDRFPARQYSIESDKRHMFLRFAACFGQFLMNHDMTISYKNLPLRMIEMTRYSFRKEQRGELVGLRRLRAFTMPDMHTLCEDMDQAVNQFKEQYDLCISVLENVGIHINDYEVAIRFTRDFYEANKDLVVNMAKTVNKPVLVEMWDTRFFYFVLKFEFNFVDALAKASALSTVQIDVENAERYDISYVNADGKLERPTVLHCSPSGAIERCIYALLEKAAMETEEGKVPML
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: MQLLLIHSDYIEYETKKQTPVAEKIEESLKSGRLEEALTAFTAVESVDEANPEEAIKKAVSEIEKVAAQVKTNRIMLYPYAHLSSDLSSPKVAVQVLKGMEAALSSRYEVKRAPFGWYKAFTVSCKGHPLSELSRS
type: DOMAIN
name: Threonyl-tRNA_syn_edit_dom_arc
description: Threonyl-tRNA synthetase, editing domain, archaea

phrase: YSIESDKRHMFLRFAACFGQFLMNHDMTISYKNLPLRMIEMTRYSFRKEQRGELVGLRRLRAFTMPDMHTLCEDMDQAVNQFKEQYDLCISVLENVGIHINDYEVAIRFTRDFYEANKDLVVNMAKTVNKPVLVEMWDTRFFYFVLKFEFNFVDALAKASALSTVQIDVENAERYDISYVNADGKLERPTVLHCSPSGAIERCIYALLE
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: QVRIVPISEKHIAFAEEVAKKLDFRVDVDDRDLSIGKKVREAGREWVPYVVVIGDKEMEESTINVTIREESGQDKPKKVQMTPEELNARIK
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding
Protein sequence:
MSIKFRTVITTAGAAKLAAATAPGRRKVGITTMAVGDGGGKLPVPDAGQTGLIHEVWRHALNKISQDKRNSNYIIAELVIPPEVGGFWMRELGLYDDAGTLIAVANMAESYKPALAEGSGRWQTCRMVIIVSSVASVELTIDTTTVMATQDYVDDKIAEHEQSRRHPDASLTAKGFTQLSSATNSTSETLAATPKAVKAAYDLANGKYTAQDATTARKGLVQLSSATNSTSETLAATPKAVKTVMDETNKKAPLNSPALTGTPTTPTARQGTNNTQIANTAFVMAAIAALVDSSPDALNTLNELAAALGNDPNFATTMTNALAGKQPKDATLTALAGLATAADRFPYFTGNDVASLATLTKVGRDILAKSTVAAVIEYLGLQETVNRAGNAVQKNGDTLSGGLTFENDSILAWIRNTDWAKIGFKNDADGDTDSYMWFETGDNGNEYFKWRSRQSTTTKDLMTLKWDALNILVNAVINGCFGVGTTNALGGSSIVLGDNDTGFKQNGDGILDVYANSQRVFRFQNGVAIAFKNIQAGDSKKFSLSSSNTSTKNITFNLWGASTRPVVAELGDEAGWHFYSQRNTDNSVIFAVNGQMQPSNWGNFDSRYVKDVRLGTRVVQLMARGGRYEKAGHTITGLRIIGEVDGDDEAIFRPIQKYINGTWYNVAQV

Annotated regions:
phrase: WAKIGFKNDADGDTDSYMWFETGDNGNEYFKWRSRQSTTTKDLMTLKWDALNILVNAVINGC
type: DOMAIN
name: Gp34_trimer
description: Long-tail fiber proximal subunit, trimerization domain

phrase: MSIKFRTVITTAGAAKLAAATAPGRRKVGITTMAVGDGGGKLPVPDAGQTGLIHEVWRHALNKISQDKRNSNYIIAELVIPPEVGGFWMRELGLYDDAGTLIAVANMAESYKPALAEGSGRWQTCRMVIIVSSVASVELTIDTTTVMATQ
type: DOMAIN
name: Phage_tail_fibre_N
description: Phage tail fibre protein, N-terminal domain

phrase: SLTAKGFTQLSSATNSTSETLAATPKAVKAAYDLANGKYT
type: REPEAT
name: Phage_lambda_Stf-r2
description: Bacteriophage lambda, Tail fiber protein, repeat-2

phrase: TTARKGLVQLSSATNSTSETLAATPKAVKTVMDETNKKAP
type: REPEAT
name: Phage_lambda_Stf-r2
description: Bacteriophage lambda, Tail fiber protein, repeat-2
Protein sequence:
MAQIYIRNSGKRLESEEVRSFLEEQGVLYEQWPTEKLPEHLREKFVLNEEEQEEILKAYQEEIQSLAKRNGYVQWDVVALSEATENLDELLKKFENVHTHSEDEVRAIVSGNGIFTIKGKEGTGYFDVELSPGDVISVPENTPHFFTLMENRKVVAVRLFIDPSGWVAHPYQDPEFTA

Annotated regions:
Protein sequence:
MDATTTHSRLSEHDIYLFREGSHGRLYDKLGCQLDEAGAHFAVWAPNARAVAVIGSFNAWRDDAAVLRPRDDGSGIWEGFVAGVAAGDVYKYSIVCQDGRVAEKADPFAQYAEVPPATGSRAWRSAHRWADDAWMAGRARANALDAPFSIYELHLGSWRRAQDGALPGYREIAPQLAAYVVEWGFTHVELMPLSEHPFYGSWGYQTTGYFAATARYGTPDDLMFLIDTLHQAGVGVILDWVPSHFPSDAHGLAEFDGTYLYEHADPRQGFHPEWHSCIFNYGRHEVCAFLLSSALFWLERFHIDGLRVDAVASMLYLDYGRQHGEWVPNRYGGRENLDAVAFLRRLNEAVYRDHPGVQTIAEESTAWPMVSRPLYVGGLGFGMKWNMGWMHDSLDYFRHDPLFRKFHHGRITFSIWYAFHENFVLPLSHDEVVYGKGSLIGKMPGDSWQQFAGLRALFGYMWAHPGKKLLFMGGEFGQRREWTHEGELEWWVLDRPEHAGLRHWVGDLNRLYRERAALHELDFDEAGFQWIDSDDSENSVLSFLRKSRNGATVLVICNFTPVTRPNYTLGVPRAGFWREALNSDATLYGGSGAGNLGGVETVPVPAHGHYQSLTLTLPPLAVLFLIPEVDDARPDS

Annotated regions:
phrase: KLGCQLDEAGAHFAVWAPNARAVAVIGSFNAWRDDAAVLRPRDDGSGIWEGFVAGVAAGDVYKYSIVCQDGRVAEKADPF
type: DOMAIN
name: Glyco_hydro_13_N
description: Glycoside hydrolase, family 13, N-terminal

phrase: AYVVEWGFTHVELMPLSEHPFYGSWGYQTTGYFAATARYGTPDDLMFLIDTLHQAGVGVILDWVPSHFP
type: DOMAIN
name: Glyco_hydro_13_cat_dom
description: Glycosyl hydrolase, family 13, catalytic domain

phrase: WIDSDDSENSVLSFLRKSRNGATVLVICNFTPVTRPNYTLGVPRAGFWREALNSDATLYGGSGAGNLGGVETVPVPAHGHYQSLTLTLPPLAVLFL
type: DOMAIN
name: A-amylase/branching_C
description: Alpha-amylase/branching enzyme, C-terminal all beta

phrase: HGRLYDKLGCQLDEAGAHFAVWAPNARAVAVIGSFNAWRDDAAVLRPRDDGSGIWEGFVAGVAAGDVYKYSIVCQDGRVAEKADPFAQYAEVPPATGSRA
type: DOMAIN
name: GlgB_N_E_set_prok
description: Glycogen branching enzyme GlgB, N-terminal Early set domain

phrase: ELHLGSWRRAQDGALPGYREIAPQLAAYVVEWGFTHVELMPLSEHPFYGSWGYQTTGYFAATARYGTPDDLMFLIDTLHQAGVGVILDWVPSHFPSDAHGLAEFDGTYLYEHADPRQGFHPEWHSCIFNYGRHEVCAFLLSSALFWLERFHIDGLRVDAVASMLYLDYGRQHGEWVPNRYGGRENLDAVAFLRRLNEAVYRDHPGVQTIAEESTAWPMVSRPLYVGGLGFGMKWNMGWMHDSLDYFRHDPLFRKFHHGRITFSIWYAFHENFVLPLSHDEVVYGKGSLIGKMPGDSWQQFAGLRALFGYMWAHPGKKLLFMGGEFGQRREWTHEGELEWWVLDRPEHAGLRHWVGDLNRLYRERAAL
type: DOMAIN
name: Glyco_hydro_13_cat_dom
description: Glycosyl hydrolase, family 13, catalytic domain