nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MNIISVGVNHKTAPIEIRERISLSEVQNKEFITGLISSGLAHEAMVVSTCNRTELYVVPAIYEVNGEFLKEYLISFKDARKEVRPEHFFSRFYCGTARHIFEVASAIDSLVLGEGQILGQVKNAYRIAAETQCAGILITRLCHTAFSVAKKVKTKTKIMEGAVSVSYAAVELAQKIFSNLSMKKVLLVGAGETGELAAKHMFQKNARNIVITNRTLSKAETLAEELGTNKVLPFETFREHLHEFDIIITAISTKEYVLNEAEMHQSMIKRRLKPVIILDLGLPRNVDPDVSKLQNMFLKDIDALKHIIDKNLEKRSRELPKVNAIIEEELIAFGQWINTLKVRPTIVDLQSKFIEIKEKELERYRYKVSEEELQRMEHLTDRILKKILHHPIKMLKAPIDTTDSIPSRVNLVRNVFDLEEPNQSH

Annotated regions:
phrase: ELAQKIFSNLSMKKVLLVGAGETGELAAKHMFQKNARNIVITNRTLSKAETLAEELGTNKVLPFETFREHLHEFDIIITAISTKEYVLNEAEMHQSMIKRRLKPVIILDLGLPRNVDPDVSKLQNMFLKDIDALKH
type: DOMAIN
name: Shikm_DH/Glu-tRNA_Rdtase
description: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase

phrase: VGVNHKTAPIEIRERISLSEVQNKEFITGLISSGLAHEAMVVSTCNRTELYVVPAIYEVNGEFLKEYLISFKDARKEVRPEHFFSRFYCGTARHIFEVASAIDSLVLGEGQILGQVKNAYRIAAETQCAGILITRLCHTAFSVAKKVKTK
type: DOMAIN
name: 4pyrrol_synth_GluRdtase_N
description: Glutamyl-tRNA reductase, N-terminal

phrase: HIFEVASAIDSLVLGEGQILGQV
type: CONSERVED_SITE
name: GluRdtase_CS
description: Glutamyl-tRNA reductase, conserved site

phrase: KVNAIIEEELIAFGQWINTLKVRPTIVDLQSKFIEIKEKELERYRYKVSEEELQRMEHLTDRILKKILHHPIKMLKAPIDTTDSIPSRVNLVRNVFD
type: DOMAIN
name: 4pyrrol_synth_GluRdtase_dimer
description: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain
Protein sequence:
MIEFVKGTIDYVCPQYVVIENGGVGYQVYSPNPFIYQINKQETIYTYHYIKEDAFSLYGFQTREEKALFTKLLNVTGIGPKGALAILASGDPGAVISAIEREDEAFLIKFPGVGKKTARQIILDLKGKLADVVPEMIGNLFNHEDHIQVETQQTALDEALEALSVLGYGDREIKKVYPLLKEEKNLTTDQYVKKALQKMLK

Annotated regions:
phrase: ALDEALEALSVLGYGDREIKKVYPLLKEEKNLTTDQYVKKALQK
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal

phrase: TALDEALEALSVLGYGDREIKKVYPLLKEEKNLTTDQYVKKAL
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal

phrase: MIEFVKGTIDYVCPQYVVIENGGVGYQVYSPNPFIYQINKQETIYTYHYIKEDAFSLY
type: DOMAIN
name: DNA_helicase_Holl-junc_RuvA_I
description: DNA helicase, Holliday junction RuvA type, domain I, bacterial

phrase: TKLLNVTGIGPKGALAILA
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: AFLIKFPGVGKKTARQIIL
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1
Protein sequence:
MPDISLKVLSNEIKISIQELIKELSIIGITKTEDNYINVLEKNILLKHLESKKKYSLDTLVLQRKTRSTLRISTVGGKNKSVQVEVRKKRAYVKNNKFENESFLNEKKVIKHSMQKTSSLKNKEKKYIKNIEKIELNKSDSRSLNTKKENKLKISNKDEQNKKFNQHRESNSFDLNHKKRIKENKDIRISHKEEKQDYHLTTFLHARQAEDENDREVEIDKRNHGRILKNYRQKKNNKNFHNGRYNKEEIRTFNRNKKNSKQKNKPILLQQVFQKPESIINRDVIISNTITVSDLANKMAIKSSEVIKNMMNMGIIGTINHVLDQDTAQLIAEEMGHKVIVHRENALEELIMKDRDTGNDVSAIRAPVVTIMGHVDHGKTSLLDYIRSTKTAFYEAGGITQNIGAYHVKTDLGSITFLDTPGHSAFTAMRSRGVQITDIVILVVAADDGVMPQTIEAIQHAKEANVPVIVAINKIDKTDSDIDKVRNDLMKYNILSEEWGGENIFVSVSAKTGKGINKLLNVILLQAEMLELKAVTTGMAEGIVVESFLDKGRGPIATVLVKKGQLKKGDVILCGFEYGRIKSLRDASGNEVFSAGPSIPVEVLGLSKVPFSGDVVTVVRDEKKAREVASYRKEKSREKKLSNQNRINLENMFDDINKNNVSELKIILKSDVQGSLEAISGALLKLSTEEVKIKIIGLGIGGITETDASLALASNAIILGFNVRADTSAKKIINSEHLDLRYYSVIYDLLDEVKAAMTGLLSPEYKENIIGLAEVRNTFKSPKFGLIAGCMVTEGVIKRSNPIHILRNNIVIYEGELESLRRFKEDVNEIRNGLECGIGIKNYNDIRVGDIIEVFEVREMKRIL

Annotated regions:
phrase: PVVTIMGHVDHGKTSLLDYIRSTKTAFYEAGGITQNIGAYHVKTDLGSITFLDTPGHSAFTAMRSRGVQITDIVILVVAADDGVMPQTIEAIQHAKEANVPVIVAINKIDKTDSDIDKVRNDLMKYNILSEEWGGENIFVSVSAKTGKGINKLLNV
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: NTITVSDLANKMAIKSSEVIKNMMNMGIIGTINHVLDQDTAQLIAEEMGH
type: DOMAIN
name: IF2_N
description: Translation initiation factor IF-2, N-terminal

phrase: GLIAGCMVTEGVIKRSNPIHILRNNIVIYEGELESLRRFKEDVNEIRNGLECGIGIKNYNDIRVGDI
type: DOMAIN
name: EFTu-like_2
description: Translation elongation factor EFTu-like, domain 2

phrase: AEGIVVESFLDKGRGPIATVLVKKGQLKKGDVILCGFEYGRIKSLRDASGNEVFSAGPSIPVEVLGLSKVPFSGDVVTV
type: DOMAIN
name: EF-G-like_DII
description: Elongation factor G-like, domain II

phrase: TLVLQRKTRSTLRISTVGGKNKSVQVEVRKKRAYV
type: DOMAIN
name: IF2_assoc_dom_bac
description: Initiation factor 2 associated domain, bacterial

phrase: AEGIVVESFLDKGRGPIATVLVKKGQLKKGDVILCGFEYGRIKSLRDASGNEVFSAGPSIPVEVLGLSKVPFSGDVVTVVRDEKKAREVASYRK
type: DOMAIN
name: IF2_II
description: Translation initiation factor IF-2, domain II

phrase: IRAPVVTIMGHVDHGKTSLLDYIRSTKTAFYEAGGITQNIGAYHVKTDLGSITFLDTPGHSAFTAMRSRGVQITDIVILVVAADDGVMPQTIEAIQHAKEANVPVIVAINKIDKTDSDIDKVRNDLMKYNILSEEWGGENIFVSVSAKTGKGINKLLNVILLQAEMLEL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: VVTIMGHVDHGKTSLLDYIRSTKTAFYEAGGITQNIGAYHVKTDLGSITFLDTPGHSAFTAMRSRGVQITDIVILVVAADDGVMPQTIEAIQHAKEANVPVIVAINKIDKTDSDIDKVRNDLMKYNILSEEWGGENIFVSVSAKTGKGINKLLNVI
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: EKKLSNQNRINLENMFDDINKNNVSELKIILKSDVQGSLEAISGALLKLSTEEVKIKIIGLGIGGITETDASLALASNAIILGFNVRADTSAKKIINSEHLDLRYYSVIYDLLDEV
type: DOMAIN
name: TIF_IF2_dom3
description: Translation initiation factor IF- 2, domain 3
Protein sequence:
MEKIDLLSLTLKEIEEILTNMGEKKFRGKQIFQWVNKGVKTFDEMTNLSKNLRDQLAERTYITNIKIEKKLISSIDGTIKYLFLLEDCNIIEGVVMKYHHGLTACISTQVGCAMGCTFCASTLDGLVRNLRAGEMIDQILTMQEDTGERISNIVLMGSGEPLHNYDETINFLKIINDENGLNIGNRHITLSTSGLVPQIKTLADLKIPINLAISLHAPNDELRQQTMPVAKKYAIDELIDSCRYYIEKTGRRITFEYALIKGVNDRDKDARELGDLLKGMLCHVNLIPVNNVDERGYKKPSIESIHQFQNTLKKAGIETTVRREMGADINAACGQLRRKHLQN

Annotated regions:
phrase: EKIDLLSLTLKEIEEILTNMGEKKFRGKQIFQWVNKGVKTFDEMTNLSKNLRDQLAERTYITNIKIEKKLISSIDGTIKYLFLLEDCNIIEGVVMKYHHGLTACISTQVGCAMGCTFCASTLDGLVRNLRAGEMIDQILTMQEDTGERISNIVLMGSGEPLHNYDETINFLKIINDENGLNIGNRHITLSTSGLVPQIKTLADLKIPINLAISLHAPNDELRQQTMPVAKKYAIDELIDSCRYYIEKTGRRITFEYALIKGVNDRDKDARELGDLLKGMLCHVNLIPVNNVDERGYKKPSIESIHQFQNTLKKAGIETTVRREMGADINAACGQLRRKH
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: ISTQVGCAMGCTFCASTLDGLVRNLRAGEMIDQILTMQEDTGERISNIVLMGSGEPLHNYDETINFLKIINDENGLNIGNRHITLSTSGLVPQIKTLADLKIPINLAISLHAPNDELRQQTMPVAKKYAIDELIDSCRYYIEKTGRRITFEYALIKGVNDRDKDA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: IDLLSLTLKEIEEILTNMGEKKFRGKQIFQWVNKGVKTFDEMTNLSKNLRDQLAERTY
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: YHHGLTACISTQVGCAMGCTFCASTLDGLVRNLRAGEMIDQILTMQEDTGERISNIVLMGSGEPLHNYDETINFLKIINDENGLNIGNRHITLSTSGLVPQIKTLADLKIPINLAISLHAPNDELRQQTMPVAKKYAIDELIDSCRYYIEKTGRRITFEYALIKGVNDRDKDARELGDLLKGMLCHVNLIPVNNVDERGYKKPSIESIHQFQNTLKKAGIETTVRREMGA
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MVVYNIAIVGATGIVGETIFQLLLERQFPARKIYLVASKRSEGKKILLGGKQKKIYNLEEFDFSTIHFAFFAAGEECSSRHAPRAAETGCVVIDNTSCFRYENDVPLVVPEVNLSALTNYRNRNIIANPNCSTIQLVVAIKPIYDIVEIARINVVTYQSVSGAGRKAIRELEEQTVCLLNGKPIGKLTVFPLQIAFNVLPHIDVFCDNGYTREEMKMVWETHKIMGNRSLQINPTAVRVPLFFGHSEAVYIETCRPISLEKVRECLKRASGIVVIDENNSYPTAASHAKNTDAVFIGRIRKDIFCSNGINLWVVANNVRKGAALNSVQIAEALINENFF

Annotated regions:
phrase: NIAIVGATGIVGETIFQLLLERQFPARKIYLVASKRSEGKKILLGGKQKKIYNLEEFDFSTIHFAFFAAGEECSSRHAPRAAETGCVVIDNTSCFRYENDVPLVVPEVNLSAL
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: NIAIVGATGIVGETIFQLLLERQFPARKIYLVASKRSEGKKILLGGKQKKIYNLEEFDFSTIHFAFFAAGEECSSRHAPRAAETGCVVIDNTSCFRYENDVPLVVPEVNLSALTN
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: IKPIYDIVEIARINVVTYQSVSGAGRKAIRELEEQTVCLLNGKPIGKLTVFPLQIAFNVLPHIDVFCDNGYTREEMKMVWETHKIMGNRSLQINPTAVRVPLFFGHSEAVYIETCRPISLEKVRECLKRASGIVVIDENNSYPTAASHAKNTDAVFIGRIRKDIFCSNGINLWVVANNVR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain
Protein sequence:
MPLSGTPAPNKKRKSSKLIMELTGGGQESSGLNLGKKISVPRDVMLEELSLLTNRGSKMFKLRQLRVEKFIYENHPDVFSDSSMDRFQKFIPTVGGQLGTAGQGFSYSKSSGGGQAGRSGSAGQYGSDQQHHHQGSGSGSGSGSGPGSGGAGGPGGHSGRGGALPDNQAGGEGKHITVFKTYISPWEKAMGIDPQQKVELGIDLLAYGAKAELPKYKSFNRTAMPYGGYEKASKRMTFQMPKFDLGPLLSEPLVLYNQNLSNRPSFNRTPIPWLSSGEPVDYNVDISIPLDGETEEL

Annotated regions:
Protein sequence:
MCDQLAFASQRKPYQHMDLRHHVRDIPDYPKPGILFRDITPLLAHPEALTASVEEMAKPFLDQKIDVVAAAEARGFIFGTPLAMRLNAGFVPIRKPGKLPFDLHSFAYELEYGSDELQIHVDGIKPGQRVLIVDDLLATGGTVEACLRLLEKCDAEIVGCSFLIHLVALGGEARLSPYHVHSVLEYGGDDAEDELSIQNRPPGPSV

Annotated regions:
phrase: SVEEMAKPFLDQKIDVVAAAEARGFIFGTPLAMRLNAGFVPIRKPGKLPFDLHSFAYELEYGSDELQIHVDGIKPGQRVLIVDDLLATGGTVEACLRLLEKCDAEIVGCSFL
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: VEEMAKPFLDQKIDVVAAAEARGFIFGTPLAMRLNAGFVPIRKPGKLPFDLHSFAYELEYGSDELQIHVDGIKPGQRVLIVDDLLATGGTVEACLRLLEKCDAEIVGCSFLIHLVALGGEARLSPYHVHSVL
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain
Protein sequence:
MNPQACTSGRLCYPVMMPLACSRTMRDLTQRGPVRSSAGYKKAEDEMSRATSVGDQLEAPARIIYLNQSHLNKFCDNRISTAKYSVLTFLPRFLYEQIRRAANAFFLFIALLQQIPDVSPTGRYTTLVPLVIILTIAGIKEIVEDFKRHKADNAVNKKKTIVLRNGMWHTIMWKEVAVGDIVKVLNGQYLPADMVLFSSSEPQGMCYVETANLDGETNLKIRQGLSHTADMQTREVLMKLSGRIECEGPNRHLYDFTGTLHLDGKSSVALGPDQILLRGTQLRNTQWVFGVVVYTGHDTKLMQNSTKAPLKRSNVEKVTNVQILVLFGILLVMALVSSVGALFWNGSHGGKSWYIKKMDTTSDNFGYNLLTFIILYNNLIPISLLVTLEVVKYTQALFINWDTDMYYIENDTPAMARTSNLNEELGQVKYLFSDKTGTLTCNIMNFKKCSIAGVTYGHFPELAREQSSDDFCRMTSCPSDSCDFNDPRLLKNIEDEHPTAPCIQEFLTLLAVCHTVVPEKDGDEIIYQASSPDEAALVKGAKKLGFVFTGRTPYSVIIEAMGQEQTFGILNVLEFSSDRKRMSVIVRMPSGQLRLYCKGADNVIFERLSKDSKYMEETLCHLEYFATEGLRTLCVAYADLSENEYEEWLKVYQEASIILKDRAQRLEECYEIIEKNLLLLGATAIEDRLQAGVPETIATLLKAEIKIWVLTGDKQETAINIGYSCRLVSQNMALILLKEDSLDATRAAITQHCTDLGNLLGKENDVAL

Annotated regions:
phrase: IYLNQSHLNKFCDNRISTAKYSVLTFLPRFLYEQIRRAANAFFLFIALLQQIPDVSPTGRYTT
type: DOMAIN
name: P-type_ATPase_N
description: P-type ATPase, N-terminal

phrase: DKTGTL
type: PTM
name: ATPase_P-typ_P_site
description: P-type ATPase, phosphorylation site
Protein sequence:
MLLKDILLGSCDYTGDEFIEDIVYNSKYAQKGTLFVALRGALSDGHKYIKDAYEKGVRIFVVEDDSMSHAYVDATFIKVGDTRKALAIISRNFFNKPDEDITMIAITGTKGKTTTANIIYEAFKKMGAKPGIIGTNGVFYADKEETVDNTTPESYEVYRILNNMRKEKITHCVLEASSIGLKMKRLYGINFDIGVFTNISHDHIGGIEHPDFDDYFSSKMLLKDISKKFIYNKDDEKLRETIKNGITFSINEESDYKAENIIISDDIFKIQSDFDIKGKVFEVKSISKYDIYNYLAAISVMKEIGYDWSEIIDAVKNISIRGRFEEINVNDRLYIIDYAHNYISLKSILETLKHFKKNKIITVFGSVGGRSEKRREELAEVSDELADISIVTSDNPNFEDPARICNEIASFIKGIHYTEPDREKAIKLSYELSDKNDIIVVAGKGHETYQLIKGEKVHYSDKECILKLKEAHDA

Annotated regions:
phrase: IVYNSKYAQKGTLFVALRGALSDGHKYIKDAYEKGVRIFVVEDDSMSHAYVDATFIKVGDTRKALAIISRN
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: GRFEEINVNDRLYIIDYAHNYISLKSILETLKHFKKNKIITVFGSVGGRSEKRREELAEVSDELADISIVTSDNPNFEDPARICNEIASFIKGIHYTEPDREKAIKLSYELSDKNDIIVVAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: ITGTKGKTTTANIIYEAFKKMGAKPGIIGTNGVFYADKEETVDNTTPESYEVYRILNNMRKEKITHCVLEASSIGLKMKRLYGINFDIGVFTNISHDHIGGIEHPDFDDYFSSKMLLKDISKKFIYNKDDEKLRETIKNGITFSINEESDYKAENIIISDDIFKIQSDFDIKGKVFEVKSISKYDIYNYLAAIS
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central
Protein sequence:
MFGFIHESIRQLVIRNYGEDTWTQVLERSGFESGKENIMNHYYSDTDTYVLVDSVSLVLKVTKDQVWEMYGGFLITYSMEIGWDELVRSMSPNLKGFLDNLDSLHYFIDHVVYKANLRGPSFRCEETPDGTLLLHYFTGRPGLYHIVKGVVKEVAKRVFDLDITLVVQGRTQRSVHMNNGERVEEHVVFLINNLSEPRRDSEGSEVSLLTSTNANFPTIVDDTLGISLDDFSKALPYHFVIDESCKLVQCGSELHNHIPNELLQPGTPILRIFEINRPQIPLDFENICNFINAVFVLQVKTSPLKKKHMDAMSQEELKQEMETLDEDATNELTQGHHLKLKGQMMLLASKKHIIYLCSPYVTSINELMQYGMRLTAMPLHDATRDLILLNQQRLSDVEVNLQLEANNEQLETMTRELELERQKTDSILKDMLPRRIAQQLLSGEHIEACEHEATVMFCDLPAFQQAIPQCSPKDIVNMLNEIFRKLDRIVVIRGVYKVETVSDSYMAVSGIPDYTPEHAENMCHVALGMMWEARSVIDPVSKTPFLLRIGIHSGTITAGVVGTVHPKYCLFGETVTLASQMESLGMAGKIQCSKWAYQKAMETGRFEFSPRGRIDVKQRGLTETYFLTRSLKKSIWEIIDHDRDINVNSIEGYEELETAIENAVTIKSALPRPDQRNSAACSIS

Annotated regions:
phrase: EATVMFCDLPAFQQAIPQCSPKDIVNMLNEIFRKLDRIVVIRGVYKVETVSDSYMAVSGIPDYTPEHAENMCHVALGMMWEARSVIDPVSKTPFLLRIGIHSGTITAGVVGTVHPKYCLFGETVTLASQMESLGMAGKIQCSKWAYQKAMETGRFEFSPRGRIDVKQRGLTETYF
type: DOMAIN
name: A/G_cyclase
description: Adenylyl cyclase class-3/4/guanylyl cyclase

phrase: LERQKTDSILKDMLPRRIAQQLLSGEHIEACEHEATVMFCDLPAFQQAIPQCSPKDIVNMLNEIFRKLDRIVVIRGVYKVETVSDSYMAVSGIPDYTPEHAENMCHVALGMMWEARSVIDPVSKTPFLLRIGIHSGTITAGVVGTVHPKYCLFGETVTLASQMESLGMAGKIQCSKWAYQKAMETGRFEFS
type: DOMAIN
name: A/G_cyclase
description: Adenylyl cyclase class-3/4/guanylyl cyclase

phrase: EATVMFCDLPAFQQAIPQCSPKDIVNMLNEIFRKLDRIVVIRGVYKVETVSDSYMAVSGIPDYTPEHAENMCHVALGMMWEARSVIDPVSKTPFLLRIGIHSGTITAGVVGTVHPKYCLFGETVTLASQMESLGMAGKIQCSKWAYQKAMETGRFEFSPRGRIDVKQRGLTETYFL
type: DOMAIN
name: A/G_cyclase
description: Adenylyl cyclase class-3/4/guanylyl cyclase

phrase: GVVGTVHPKYCLFGETVTLASQM
type: CONSERVED_SITE
name: A/G_cyclase_CS
description: Adenylyl cyclase class-4/guanylyl cyclase, conserved site

phrase: GFIHESIRQLVIRNYGEDTWTQVLERSGFESGKENIMNHYYSDTDTYVLVDSVSLVLKVTKDQVWEMYGGFLITYSMEIGWDELVRSMSPNLKGFLDNLDSLHYFIDHVVYKANLRGPSFRCEETPDGTLLLHYFTGRPGLYHIVKGVVKEVAKRVFDLDIT
type: DOMAIN
name: Heme_NO-bd
description: Heme NO-binding

phrase: TVMFCDLPAFQQAIPQCSPKDIVNMLNEIFRKLDRIVVIRGVYKVETVSDSYMAVSGIPDYTPEHAENMCHVALGMMWEARSVIDPVSKTPFLLRIGIHSGTITAGVVGTVHPKYCLFGETVTLASQM
type: DOMAIN
name: A/G_cyclase
description: Adenylyl cyclase class-3/4/guanylyl cyclase

phrase: ISLDDFSKALPYHFVIDESCKLVQCGSELHNHIPNELLQPGTPILRIFEINRPQIPLDFENICNFINAVFVLQVKTSPLKKKHMDAMSQEELKQEMETLDEDATNELTQGHHLKLKGQMMLLASKKHIIYLCSPYVTSINELMQYGMRLTAMPLHDATRDLILLNQQRLSDVEVNLQLEANNEQLETMTRELELERQKTDSILKDMLPRRIAQQ
type: DOMAIN
name: HNOB_dom_associated
description: Haem NO binding associated
Protein sequence:
MIRSTVRGVGAALPRRVVTNKDLETRLETSDEWIVQRTGIRQRHIASDDETTASLGEAAALRALDAAGLAPADIDLIVVATSTPNNTFPATAVEIQERLGIRQGFAFDMQAVCSGFVYAVTTADLYIRGGMAKRALVIGAETFSRILDWTDRTTCVLFGDGAGAIVLEAEEGQGDISDRGILAEALRSDGSHKEKLYVDGGPSTTRTVGHLRMQGREVFKHAVGMITDVIEDVFGQAGITAEDIDWFVSHQANKRIIDASAKKLGIAEEKVVITVDLHGNTSAASVPLALNHAVSQGKIQKGDLVLLEAMGGGFTWGAVLLRW

Annotated regions:
phrase: FDMQAVCSGFVYAVTTADLYIRGGMAKRALVIGAETFSRILDWTDRTTCVLFGDGAGAIVLEAEEGQGDISDRGILAEALRSD
type: DOMAIN
name: ACP_syn_III_N
description: Beta-ketoacyl-[acyl-carrier-protein] synthase III, N-terminal

phrase: QAGITAEDIDWFVSHQANKRIIDASAKKLGIAEEKVVITVDLHGNTSAASVPLALNHAVSQGKIQKGDLVLLEAMGGGFTWGAVLLR
type: DOMAIN
name: ACP_syn_III_C
description: Beta-ketoacyl-[acyl-carrier-protein] synthase III, C-terminal
Protein sequence:
MASSMLSNAAMATTAATAGAQASMVAPFNGLKSFATFPITKKSSNDFSSLPSNGGRVQCMQVWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEFELEHPFVYRENHRSPGYQDGRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYPSAFIRIIGFDNKRQVQCVSFIAYKPAGGL

Annotated regions:
phrase: KFETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEFELEHPFVYRENHRSPGYQDGRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYPSAFIRIIGFDNKRQVQCVSFIAYK
type: DOMAIN
name: RuBisCO_ssu_dom
description: Ribulose bisphosphate carboxylase small subunit, domain

phrase: ASSMLSNAAMATTAATAGAQASMVAPFNGLKSFATFPITKKSSN
type: DOMAIN
name: RuBisCO_ssu_N
description: Ribulose-1,5-bisphosphate carboxylase small subunit, N-terminal

phrase: FETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEFELEHPFVYRENHRSPGYQDGRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYPSAFIRIIGFDNKRQVQCVSFIAYK
type: DOMAIN
name: RuBisCO_ssu_dom
description: Ribulose bisphosphate carboxylase small subunit, domain

phrase: KKFETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEFELEHPFVYRENHRSPGYQDGRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYPSAFIRIIGFDNKRQVQCVSFIAYKP
type: DOMAIN
name: RuBisCO_ssu_dom
description: Ribulose bisphosphate carboxylase small subunit, domain

phrase: KKFETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEFELEHPFVYRENHRSPGYQDGRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYPSAFIRIIGFDNKRQVQCVSFIAYK
type: DOMAIN
name: RuBisCO_ssu_dom
description: Ribulose bisphosphate carboxylase small subunit, domain
Protein sequence:
MELNFEKPLSLLTLDEIDQQEGGVIQSFRTGHTSPYPDPADWLNGEEPPPGVFITSVEKVLNWSRHYSLWPVMFGLACCAIEMMCMAASRWDLARFGMDIFRASPRQADLMIVAGTLTWKMAPWLKRIYDQMPEPKWVLAMGACGTSGGLFRDSYSVVPGFNLVVPVDVYVPGCPPRPEALMRAIMDIHEKIDKTCILKR

Annotated regions:
phrase: CCAIEMMCMAASRWDLARFGMDIFRASPRQADLMIVAGTLTWKMAPWLKRIYDQMPEPKWVLAMGACGTSGGLFRDSYSVVPGFNLVVPVDVYVPGCPPRPEALMRAIM
type: DOMAIN
name: NADH_UbQ_OxRdtase-like_20kDa
description: NADH:ubiquinone oxidoreductase-like, 20kDa subunit
Protein sequence:
MRMNKQIVVTDWIKEKPKLGSFLKLTLSSDERRILRGKRLTDCDQEIILQLPREGKLNDGDILSTNKSNFYVEIVAKKENLIEISSNSKIELIKTAYHLGNRHVELEIEEGILLTKSDYVIKNMLLNFKVNIKNTKKKFFPERGAHSHE

Annotated regions:
phrase: IVVTDWIKEKPKLGSFLKLTLSSDERRILRGKRLTDCDQEIILQLPREGKLNDGDILSTNKSNF
type: DOMAIN
name: UreE_N
description: UreE urease accessory, N-terminal

phrase: ENLIEISSNSKIELIKTAYHLGNRHVELEIEEGILLTKSDYVIKNMLLNFKVNIKNTKKKFFPERGAH
type: DOMAIN
name: UreE_C_dom
description: Urease accessory protein UreE, C-terminal domain
Protein sequence:
MGSSTDHGGAGGRGKKGSGSQLWKKALLHSSLCFVMGFFTGFAPSSVSDWTSAAVSAGGVGSSHVVRSLHATGGAAVNRSLLAQAAAGAVDAGPQPLLVVVTTTESTPSAAGQRAAALTRMAHTLRLVPPPLLWVVVEANPDVAATARLLRTTGLMYRHLTYKDNFTVADAAAGKERHHQRNVALGHIEHHRLAGVVLFAGLGDTFDLRFFDQLRQIRTFGAWPVATMSQNERKVVVQGPACSSSSVAGWFSMDLSNATSPVAVGGAGYGAAAARPRELDVHGFAFNSSVLWDPERWGRYPTSEPDKSQDSVKFVQQVVLEDYSKVRGIPSDCSEVMAKLRTVSQQLEATWRSALAIINELLRACASVHGHVRSKLDSLYRSDFPQTEPETLICLIHDHASHYIYGGRFLSGDFC

Annotated regions:
Protein sequence:
MGYVGNVSYPDTIPGQGNLVFEASFESGNLGRVDKVSCSEYDLFIRPDTLNNKYRVWFYFECKNASENQRAIFNIVNFSKQRTLFEMGIAAPVVKSNAQNSWARIPSRHIYYYRSSQHNDRWILSFAFIFESPDPVQFAYCIPYTYGQMQIWLNELESRKYPFFHRDLLVQTVQKRRVDLITIDATPDTFQGSKKMIFLTARVHPGESPSSHVMHGIIEFLVSKDDRAQKLRKVYCFKIIPMLNPDGVFLGNYRCSLMGHDLNRMWRTPSDWAHPSIYAVKNLLTQYDNNPQAQTVIYVDLHAHSQKPNCFLYGNVNMSAVEEKSTFRQLWLPHLLADLSEDYSLEFTQFNTDVEKAGTGRRTMGDLLSCLCYTLEVSFFSYRHTDSSGNGIQHCTPYLQYKYEALGEAFCRALLNFYEADCGLREIVLERPFKTFLPARAQKTLKKQARKVIQTVMMK

Annotated regions:
phrase: WLNELESRKYPFFHRDLLVQTVQKRRVDLITIDATPDTFQGSKKMIFLTARVHPGESPSSHVMHGIIEFLVSKDDRAQKLRKVYCFKIIPMLNPDGVFLGNYRCSLMGHDLNRMWRTPSDWAHPSIYAVKNLLTQYDNNPQAQTVIYVDLHAHSQKP
type: DOMAIN
name: Peptidase_M14
description: Peptidase M14, carboxypeptidase A

phrase: EASFESGNLGRVDKVSCSEYDLFIRPDTLNNKYRVWFYFECKNASENQRAIFNIVNFSKQRTLFEMGIAAPVVKSNAQNSWARIPSRHI
type: DOMAIN
name: Pepdidase_M14_N
description: Cytosolic carboxypeptidase, N-terminal
Protein sequence:
MTKKAWFLPLVCVLLISGWLAPAASASAQTTLSLNDRLASSPSGTGSLLSLAAPAAPYADTDTYYEGAEGKTGDSLKSTLHRIISGHTMLSYSEVWNALKETDEDPRNPNNVILLYTNESRSKNLNGGNVGDWNREHVWAKSHGDFGTSKGPGTDIHHLRPADVQVNSARGNMDFDNGGTEYAKAPGNYYDGDSWEPRDDVKGDVARMLFYMAVRYEGDDGYPDLELNDKTGNGSAPYHGKQSVLLEWNKQDPVDDRERKRNEIIYEKYQHNRNPFIDHPEWADEIWP

Annotated regions:
Protein sequence:
MAAIIVVGAQWGDEGKGKATDILGGKVDYVVKPNGGNNAGHTVVVGGEKYELKLLPAGVLSENATPIIGNGCVVNLEALFEEIDGLEARGANASRLRVSANAQLVAPYHVAIDRVAERFLGKRAIGTTGRGIGPTYADKVSRVGIRAQDLLDESILRQKIESALDQKNQILVKIYNRRAVDVDEVVEYFLSYADRLKPMLIDATTELNKALDAGKSVLMEGGQATMLDVDHGTYPFVTSSNPTTGGACVGTGIGPTRITASLGIIKAYTTRVGAGPFPTELFDKWGEFLQTTGGEVGVNTGRKRRCGWYDSVIARYASRVNGFTDYFLTKLDVLTGIGEIPICVAYDVDGVRHDEMPMTQTEFHHATPIYETMPAWDEDITDCKTFEELPEKAQDYVKRLEELSGCRISYIGVGPGRDQTIVINDVAEG

Annotated regions:
phrase: QWGDEGK
type: BINDING_SITE
name: Adenylosuccin_syn_GTP-bd
description: Adenylosuccinate synthase, GTP-binding site

phrase: GIGPTYADKVS
type: ACTIVE_SITE
name: Adenylosuccin_syn_Lys_AS
description: Adenylosuccinate synthase, active site
Protein sequence:
MSENHDAIVTDAKTEETDGCPVAHGRAPHPTQGGGNRQWWPERLNLKILAKNPAVANPLGEEFDYAEAFEALDLAAVKRDIAEVLTTSQDWWPADFGNYGPLMIRMAWHSAGTYRISDGRGGAGAGQQRFAPLNSWPDNGNLDKARRLLWPVKKKYGQNLSWADLLVLTGNVALETMGFETFGFAGGRADVWEAEEDVYWGPETTWLDDRRYTGDRELENPLGAVQMGLIYVNPEGPNGNPDPIAAARDIRETFRRMAMNDEETVALIAGGHTFGKTHGAGPADAVGDDPEAAAMEQQGLGWKSTHGTGKGGDAITSGLEVTWTSTPTQWGNGFFKNLFEFEYELEQSPAGANQWVAKDAPEIIPDAHDPAKKHRPRMLTTDLSLRLDPIYGPISRRFYENPEEFADAFARAWFKLTHRDMGPKSLYLGPEVPEETLIWQDPLPEPEGEVIDAEDVATLKTKLLESGLSVSQLVTTAWASASTFRGSDKRGGANGARIRLEPQRGWEVNEPDELAQVLRVLEGVQREFNSGSGAKKVSLADLIVLGGSAAVEKAAKEAGFPVEVPFAAGRVDATEEHTDAESFEALEPTADGFRNYLGKGNRLPAEFLLLDRANLLTLSAPEMTVLVGGLRVLGAGHQQSQLGVFTRTPGSLTNDFFVNLLDLGTTWKSTSEDRTTFEGRDAATGEVKWAGSRADLVFGSNAELRALAEVYASDDAGEKFVHDFVAAWVKVMNLDRFDLA

Annotated regions:
phrase: TVALIAGGHT
type: BINDING_SITE
name: Peroxidases_heam-ligand_BS
description: Peroxidases heam-ligand binding site

phrase: GPLMIRMAWHSAGT
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: LSWADLLVLTGNVALET
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: GFETFGFAGGRA
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: TVALIAGGHTFGKTH
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: WTSTPTQWGNGFFKN
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: GPLMIRMAWHS
type: ACTIVE_SITE
name: Peroxidases_AS
description: Peroxidase, active site

phrase: FGNYGPLMIRMAWHSAGTYRISDGRGGAGAGQQRFAPLNSWPDNGNLDKARRLLWPVKKKYGQNLSWADLLVLTGNVALETMGFETFGFAGGRADVWEAEEDVYWGPETTWLDDRRYTGDRELENPLGAVQMGLIYVNPEGPNGNPDPIAAARDIRETFRRMAMNDEETVALIAGGHTFGKTHGAGPADAVGDDPEAAAMEQQGLGWKSTHGTGKGGDAITSGLEVTWTSTPTQWGNGFFKNLFEFEYELEQSPAGANQWVAKDAPEIIPDAHDPAKKHRPRMLTTDLSLRLDPIYGPISRRFY
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: AFARAWFKLTHRDMGPKSLYLGPEVPEETLIWQDPLPEPEGEVIDAEDVATLKTKLLESGLSVSQLVTTAWASASTFRGSDKRGGANGARIRLEPQRGWEVNEPDELAQVLRVLEGVQREFNSGSGAKKVSLADLIVLGGSAAVEKAAKEAGFPVEVPFAAGRVDATEEHTDAESFEALEPTADGFRNYLGKGNRLPAEFLLLDRANLLTLSAPEMTVLVGGLRVLGAGHQQSQLGVFTRTPGSLTNDFFVNLLDLGTTWKSTSEDRTTFEGRDAATGEVKWAGSRADLVFGSNAELRALAEVYAS
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: LDKARRLLWPVKKKYGQNLSWADLLVLTGNVALETMGFETFGFAGGRADVWEAEEDVYWGPETTWLDDRRYTGDRELENPLGAVQMGLIYVNPEGPNGNPDPIAAARDIRETFRRMAMNDEETVALIAGGHTFGKTHGAGPADAVGDDPEAAAMEQQGLGWKSTHGTGKGGDAITSGLEVTWTSTPTQWGNGFFKNLFEFEYELEQSPAGANQWVAKDAPEIIPDAHDPAKKHRPRMLTTDLSLRLDPIYGPISRRFYENPEEFADAFARAWFKLTHRDMGPKSLYLGPEVPEETLIWQDPLPEPEGE
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase
Protein sequence:
MATKKAGGGSRNGRDSAGRRLGVKKTDGQYVIPGNIIVRQRGTKIHPGTNVGLGKDHTIFALIEGRVEFLTKRNHKIVNVKGIAST

Annotated regions:
phrase: GNIIVRQRGTKIHP
type: CONSERVED_SITE
name: Ribosomal_bL27_CS
description: Large ribosomal subunit protein bL27, conserved site
Protein sequence:
MATGTFDIIHPGHGFYLKKAKELGGKNSKLVVIVARDSTVRARKRKPVINEKQRLEVVKMLKPVDEAYLGCEGDIFKTVEKIKPDIIALGPDQDFDEKELQKELKKRNIDCKVVRIKEYKKSPLDSTCKIIKKIKQMKFDDIEKC

Annotated regions:
phrase: MATGTFDIIHPGHGFYLKKAKELGGKNSKLVVIVARDSTVRARKRKPVINEKQRLEVVKMLKPVD
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: ATGTFDIIHPGHGFYLKKAKELGGKNSKLVVIVARDSTVRARKRKPVINEKQRLEVVKMLKPVDEAYLGCEGDIFKTVEKIKPDIIALGPDQDFDEKELQKELKKRNIDCKVVRIKEYKKSPLDSTCKII
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain
Protein sequence:
METVEAGHDDVIGWFEHVSENACKVQSETLRRILELNSGVEYLRKWLGTVDVEKMDDYTLETLFTSLVPIVSHADLDPYIQRIADGETSPLLTQEPITVLSLSSGTTEGRQKYVPFTRHSAQTTLQIFRLSAAYRSRFYPIREGGRILEFIYAGKEFKTLGGLTVGTATTHYYASEEFKTKQETTKSFTCSPQEVISGGDFGQCTYCHLLLGLHYSSQVEFVASAFSYTIVQAFSFFEEIWREICADIKEGNLSSRITLPKMRKAVLALIRPNPSLASHIEEICLELETNLGWFGLISKLWPNAKFISSIMTGSMLPYLNKLRHYAGGLPLVSADYGSTESWIGVNVDPHLPPEDVSFAVIPTFSYFEFIPLYRRQNQSDICIDGDFVEDKPVPLSQVKLGQEYELVLTTFTGLYRYRLGDVVEVTSFHKGTPKLSFIYRRKLILTINIDKNTEKDLQRVVDKASQLLSRSTRAEVVDFTSHADVIARPGHYVIYWEIRGEADDKALEECCREMDTAFVDYGYVVSRRMNSIGPLELRVVERGTFGKVAERCVGKCGGLNQFKTPRCTTNSVMLDILNDSTIKRFRSSAYD

Annotated regions:
phrase: KDLQRVVDKASQLLSRSTRAEVVDFTSHADVIARPGHYVIYWEIRGEADDKALEECCREMDTAFVDYGYVVSRRMNSIGPLELRVVERGTFGKVAERCVGKCGGLNQFKTPRCTT
type: DOMAIN
name: GH3_C
description: GH3, C-terminal domain

phrase: AVIPTFSYFEFIPLYRRQNQSDICIDGDFVEDKPVPLSQVKLGQEYELVLTTFTGLYRYRLGDVVEVTSFHKGTPKLSFIY
type: DOMAIN
name: GH3_M
description: GH3, middle domain
Protein sequence:
MAPVPVTASNLNTSHSEAIFSAAKALMPGGVSSPVRAFKSVGGQPIVFDRVKGPYAWDVDGNKYVDYIGSWGPAICGHAHPEVISALQEAIEKGTSFGAPCALENTLAEMVIEAVPSVEMVRFVNSGTEACMSMLRLIRAFTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPDSPGVPRSTTANTLTAPYNDLESVKQLFAENPDAIAGVILEPIVGNAGFIQPEPGFLEGLRELTKENGALLVFDEVMTGFRISYGGAQAHFGVTPDLTTMGKVIGGGLPVGAYGGRKEIMEMVAPAGPMYQAGTLSGNPLAMTAGIKTLELLKQPGSYEKLTATTERLIQGILDAGREAGLPITGGSVGAMFGFFLCEGPVRNFEEAKATDSVRFGLLHRAMLERGVYLAPSAFEAGFTSLAHSDENIDATIQAFRDSFAAIS

Annotated regions:
phrase: LVFDEVMTGFRISYGGAQAHFGVTPDLTTMGKVIGG
type: CONSERVED_SITE
name: Aminotrans_3_PPA_site
description: Aminotransferases class-III pyridoxal-phosphate attachment site
Protein sequence:
MTKPHDFKTRAIIVRKTKCGEADRILSLLTPDLGLIQGFAKSVRKTKSKLSGHLELFCYSEVSLARGKAIDTVTGSQTIQSFLNIRSSLQLSAMAFYVCELAFHFSPEESANPAIFQLLLSTLEELDNTTQAELCTKYFEIHLLEMSGYKPELRECANCHQKLLATTNYFSPESGGIICPDCRNTQTGIPISVNAVKVLRYIQENDIPNIYRLKINREILSELELAIRANIRFVLEKEPKALLWLDSLSRANL

Annotated regions:
phrase: DFKTRAIIVRKTKCGEADRILSLLTPDLGLIQGFAKSVRKTKSKLSGHLELFCYSEVSLARGKAIDTVTGSQTIQS
type: DOMAIN
name: DNA_rep/recomb_RecO_N
description: DNA replication/recombination mediator RecO, N-terminal