nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSAIDSCEHTVSWKLCEQKYNEATTLLSKLKKLLGNFKENCTSVVVDGHKKPRSESRKKYDAKKQHQSSHFATPVKGVESSEPTEKKKRNKEALWLRARQKKWKEIFELCQKITSLLGGTILIDVSFSMEKDVLTYLWMRVHYQVISFFKHRIYEASTQHDPELLSSLVTMHIQYLNSTIQFYTTLIAIIGELYHLQCLSPLTSFFTSCVTPKTILESPLRKQGSHNWKTSTNSQSRLAALFSSIFEDSCLEVDSVKRLLSGSPSSSSSPLKKDSSSNSLTYEPALTDHKPQYLVLCVYRSLIYIGDVHRYLAEVRSPNVPDYQVSRRYYVMAANVAPDYGVHFHQLGLIEVADARSSSRKSSSGQSSSLKGNVNVEDKRLIQALPAISFFFLSSISPNNVAASSAKTSLFIALKRCFGKTNDGSNPCLYHKESSAISLFLRLYAIAFSNTDADYIQDSGPLFKRVRFLLSESLKSGLFSESSLLQMTYCALAARVLAPFIGFSDSGEHGESYPNLKLATQTTTMFFEVLSDSVNSQLPLQALTSGVSSKKDGNFDDLVERRQYGSLSSNAVLMPMLLPLCVLTSSCLQNGDVWLTKDIRTGLSQIFNRLSFFLENTNQTAPDDSVLVRCSSKSIGLLFFFPLVKVCGVPRDTLQWLYFSNHYPFNEEGKGPQVDDSDALITIALDSLYVLLNMRAKSTPNSTSFSSPPTPHRSPFSGQAFTGMGLSNYSLMSSSSFPSAQSSPTSPFLSGTPSIANQSSSIASLQFG

Annotated regions:
phrase: SRRYYVMAANVAPDYGVHFHQLGLIEVADARSSSRKSSSGQSSSLKGNVNVEDKRLIQALPAISFFFLSSISPNNVAASSAKTSLFIALKRCFGKTNDGSNPCLYHKESSAISLFLRLYAIAFSNTDADYIQDSGPLFKRVRFLLSESLKSGLFSESSLLQMTYCALAARVLAPFIGFSDSGEHGESYPNLKLATQTTTMFFEVLSDSVNSQLPLQALTSGVSSKKDGNFDDLVERRQYGSLSSNAVLMPMLLPLCVLTSSCLQNGDVWLTKDIRTGLSQIFNRLSFFLENTNQTAPDDSVLVRCSSKSIG
type: DOMAIN
name: DNA/RNA-bd_Est1-type
description: DNA/RNA-binding domain, Est1-type

phrase: DVLTYLWMRVHYQVISFFKHRIYEASTQHDPELLSSLVTMHIQYLNSTIQFYTTLIAIIGELYHLQCLSPLTSFFTSCVTPKTILESPLRKQGSHNWKTSTNSQSRLAALFSSIFEDSCLEVDSVKRLLSGSPSSSSSPLKKDSSSNSLTYEPALTDHKPQYLVLCVYRSLIYIGDVHRYLAE
type: DOMAIN
name: Est1-like_N
description: Telomerase activating protein Est1-like, N-terminal
Protein sequence:
MSSTSNENISSYVIFKSKGQHINTSYNPIDIHPIHPWIVYADSDSNIVIQNYQNNEKILNFSISQHDEEKKEQILLLQKKVPTLSALSSSASGINGTNNNNSGSNSSNNNNNNNGSLSNSPNNNNNVAFIGSTGGVDSRSASVTSIGSGGGVVTPINVNSNSNSNSPSVPTLHVIGNQTLHNRSPNNTIKLSPNSSNNDSLNNNNNNINNNSTNSNNYLNENLDKMKLGQIKFIYFYDKHTRSCKDKKPKISQNKLQNISKAQPSVGIEDYIVVVAENRIVFINYHSQRLREVKIPAFENKSPNSVEFFSNSPFVAFGGPDSMIRLWNTEKWEIEKQLAGHPKGTIVKLKAIEIEGEFLVSGGTDGFVCVWNVKTGSLATQFSKVHEIVDLSYDYVTGQVMALTQDRHIMIYDLNTLKEVSKVSCGKKEFFSIEAYYHSRFNQDLLLGMKQPAQVSFFSRSGSTKEYSIDLDALLNPSKKEKSKLYKVVQHPLQPHLLLCWLNKSVYIVSTLATSIPMQVTTFNSLSNDHTVYYPFAGYLYSSSLTNVLTCEKVQTPIQLSLNENYKLDISPSGKYLSIHAISSGNYQILEISTWKILEKGQALDVAWSGKGKDSTVDEKFGKLEKILESVDSVKKKKTLGILPSIVKSTKKEETVISKILLKTKEFNNNNVVQELLLHANEDRISGGLMLGVYHKESTNSNGTLNYGSGGSIGSGSGSGTISSGSSNLINGSVGGSSSNNSANSNNSNNNNNNNNNNSNNSNNNNNSSQPILEPPIITTGEETESKSFQLLDWWTLQPVGESLPPPLKIYWDQNQTHCAIAFTHYFFVFKLRPTFHMLCRWSLGITSAVWHNNTLFFSTHNDIQCIFPHKHESSPIILASSTGNVFPEDLYDLSSGSLSTSKPNQSFSTLPNIKPTGPISLIEVNNEGLVLLDSNYKFYCIPLTHYLLKFFILAQMEAIDLAMKCSTMVDPKYHYLMAKFLTVRGHPKECLQMNGISNFLKLQICLNNEAFETSLDIVPLITEAIKSGQSITNENNNDEEVTLSSMGKMCIEIGQRAQNKNEYPTAEKAFKLATSLEPNSAYQELALHYVFLKKMNELKELQQSISTTYPLESNLISLFLD

Annotated regions:
phrase: TGSLATQFSKVHEIVDLSYDYVTGQVMALTQDRHIMIY
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: HSQRLREVKIPAFENKSPNSVEFFSNSPFVAFGGPDSMIRLW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: KWEIEKQLAGHPKGTIVKLKAIEIEGEFLVSGGTDGFVCVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: KQLAGHPKGTIVKLKAIEIEGEFLVSGGTDGFVCVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: EGEFLVSGGTDGFVCVWNVKTGSLAT
type: REPEAT
name: WD40_rpt
description: WD40 repeat
Protein sequence:
MPGGCSRGPAAGDGRLRLARLALVLLGWVSSSSPTSSASSFSSSAPFLASAVSAQPPLPDQCPALCECSEAARTVKCVNRNLTEVPTDLPAYVRNLFLTGNQLAVLPAGAFARRPPLAELAALNLSGSRLDEVRAGAFEHLPSLRQLDLSHNPLADLSPFAFSGSNASVSAPSPLVELILNHIVPPEDERQNRSFEGMVVAALLAGRALQGLRRLELASNHFLYLPRDVLAQLPSLRHLDLSNNSLVSLTYVSFRNLTHLESLHLEDNALKVLHNGTLAELQGLPHIRVFLDNNPWVCDCHMADMVTWLKETEVVQGKDRLTCAYPEKMRNRVLLELNSADLDCDPILPPSLQTSYVFLGIVLALIGAIFLLVLYLNRKGIKKWMHNIRDACRDHMEGYHYRYEINADPRLTNLSSNSDV

Annotated regions:
phrase: LQGLRRLELASNHFLYLPRDVLA
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LPAYVRNLFLTGNQLAVLPAGAFA
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LTHLESLHLEDNALKVLHNGTLA
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LAELAALNLSGSRLDEVRAGAFE
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LPSLRHLDLSNNSLVSLTYVSFR
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LPSLRQLDLSHNPLADLSPFAFS
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: NPWVCDCHMADMVTWLKETEVVQGKDRLTCAYPEKMRNRVLLELNSADLDC
type: DOMAIN
name: Cys-rich_flank_reg_C
description: Cysteine-rich flanking region, C-terminal

phrase: LTCAYPEKMRNRVLLELNSADLDC
type: DOMAIN
name: Cys-rich_flank_reg_C
description: Cysteine-rich flanking region, C-terminal

phrase: SLRQLDLSHNPLADLSPFAFS
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: QCPALCECSEAARTVKCVNRNLTEVPTDLPAYVR
type: DOMAIN
name: LRRNT
description: Leucine-rich repeat N-terminal domain

phrase: SLRHLDLSNNSLVSLTYVSFR
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: VRNLFLTGNQLAVLPAGAFARRPPLAELAALNLSGSRLDEVRAGAFEHLPSLRQLDLSHNP
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: GLRRLELASNHFLYLPRDVLAQLPSLRHLDLSNNSLVSLTYVSFRNLTHLESLHLEDNA
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: QCPALCECSEAARTVKCVNRNLTEVPTDL
type: DOMAIN
name: LRRNT
description: Leucine-rich repeat N-terminal domain
Protein sequence:
MPIITDVYAREVLDSRGNPTVEVEVLTESGAFGRALVPSGASTGEHEAVELRDGDKSRYLGKGVTKAVDNVNEIIAPELIEGEFSVLEQVSIDKMMIQLDGTENKGKLGANAILGVSIAVARAAADLLGQPLYKYLGGFNGKQLPVPMMNIVNGGSHSDAPIAFQEFMVLPVGAESFKESLRWGAEIFHNLKSILKNRGLETAVGDEGGFAPKFEGTEDAVETILEAIKAVGLEPGKDVFLGFDCASSEFFEDGVYNYAKFEGENGAKRSAEEQVDYLEELVNKYPIITIEDGMDENDWDGWKVLTDRIGDKVQLVGDDLFVTNTVKLSEGIEKGIGNSILIKVNQIGTLTETFDAIEMAQKAGYTAVVSHRSGETEDTTISDIAVATNAGQIKTGSLSRTDRIAKYNQLLRIEDELYETGKFDGLKSFYNLSK

Annotated regions:
phrase: QLPVPMMNIVNGGSHSDAPIAFQEFMVLPVGAESFKESLRWGAEIFHNLKSILKNRGLETAVGDEGGFAPKFEGTEDAVETILEAIKAVGLEPGKDVFLGFDCASSEFFEDGVYNYAKFEGENGAKRSAEEQVDYLEELVNKYPIITIEDGMDENDWDGWKVLTDRIGDKVQLVGDDLFVTNTVKLSEGIEKGIGNSILIKVNQIGTLTETFDAIEMAQKAGYTAVVSHRSGETEDTTISDIAVATNAGQIKTGSLSRTDRIAKYNQLLRIEDELYETGKFDGLKSF
type: DOMAIN
name: Enolase_C
description: Enolase, C-terminal TIM barrel domain

phrase: GKQLPVPMMNIVNGGSHSDAPIAFQEFMVLPVGAESFKESLRWGAEIFHNLKSILKNRGLETAVGDEGGFAPKFEGTEDAVETILEAIKAVGLEPGKDVFLGFDCASSEFFEDGVYNYAKFEGENGAKRSAEEQVDYLEELVNKYPIITIEDGMDENDWDGWKVLTDRIGDKVQLVGDDLFVTNTVKLSEGIEKGIGNSILIKVNQIGTLTETFDAIEMAQKAGYTAVVSHRSGETEDTTISDIAVATNAGQIKTGSLSRTDRIAKYNQLLRIEDELYETGKFDGLKSFY
type: DOMAIN
name: Enolase_C
description: Enolase, C-terminal TIM barrel domain

phrase: ITDVYAREVLDSRGNPTVEVEVLTESGAFGRALVPSGASTGEHEAVELRDGDKSRYLGKGVTKAVDNVNEIIAPELIEGEFSVLEQVSIDKMMIQLDGTENKGKLGANAILGVSIAVARAAADLLGQPLYKY
type: DOMAIN
name: Enolase_N
description: Enolase, N-terminal

phrase: ILIKVNQIGTLTE
type: CONSERVED_SITE
name: Enolase_CS
description: Enolase, conserved site

phrase: ITDVYAREVLDSRGNPTVEVEVLTESGAFGRALVPSGASTGEHEAVELRDGDKSRYLGKGVTKAVDNVNEIIAPELIEGEFSVLEQVSIDKMMIQLDGTENKGKLGANAILGVSIAVARAAADLLGQPLYKY
type: DOMAIN
name: Enolase_N
description: Enolase, N-terminal
Protein sequence:
MEETYIDTLDPEKLLQCPYDKNHQIRACRFPYHLIKCRKNHPDVANKLATCPFNARHQVPRAEISHHISSCDDKSCIEQDVVNQTRSLGQETMAESTWRCPPCDEDWDKDLWEQTSTPFVWGTANYCGNNSPASNIVMEHKSNLASGMRVPKSLPYVLPWKNNGNAQ

Annotated regions:
phrase: LATCPFNARHQVPRAEISHHISS
type: DOMAIN
name: TRM13/UPF0224_CHHC_Znf_dom
description: TRM13/UPF0224 family, U11-48K-like CHHC zinc finger domain

phrase: LLQCPYDKNHQIRACRFPYHLIKC
type: DOMAIN
name: TRM13/UPF0224_CHHC_Znf_dom
description: TRM13/UPF0224 family, U11-48K-like CHHC zinc finger domain

phrase: LATCPFNARHQVPRAEISHHISSCDDK
type: DOMAIN
name: TRM13/UPF0224_CHHC_Znf_dom
description: TRM13/UPF0224 family, U11-48K-like CHHC zinc finger domain

phrase: LLQCPYDKNHQIRACRFPYHLIKCRKN
type: DOMAIN
name: TRM13/UPF0224_CHHC_Znf_dom
description: TRM13/UPF0224 family, U11-48K-like CHHC zinc finger domain
Protein sequence:
MPSPASNTWINTTLPSSCSSPFKDLASTSSSPTTLLPFKKRSSSNTNTITCSLQTLHYPKQYQPTSTSTTTTPTPIKPTTTTTTTTPHRETKPLSDTKQPFPQKWNFLQKAAATGLDMVETALVSHESKHPLPKTADPKVQIAGNFAPVPEHAADQALPVVGKIPKCIDGVYVRNGANPLYEPVAGHHFFDGDGMVHAVKFTNGAASYACRFTETQRLAQEKSLGRPVFPKAIGELHGHSGIARLLLFYARSLFQLVDGSHGMGVANAGLVYFNNHLLAMSEDDLPYHVRITSNGDLTTVGRYDFNGQLNSTMIAHPKLDPVNGDLHALSYDVVQKPYLKYFRFSADGVKSPDVEIPLKEPTMMHDFAITENFVVVPDQQVVFKLTEMITGGSPVVYDKNKTSRFGILDKNAKDANAMRWIDAPECFCFHLWNAWEEPETDEIVVIGSCMTPADSIFNECDESLKSVLSEIRLNLRTGKSTRRPIISDAEQVNLEAGMVNRNKLGRKTQFAYLALAEPWPKVSGFAKVDLFSGEVQKYMYGEEKFGGEPLFLPNGEEEGDGYILAFVHDEKEWKSELQIVNAQNLKLEASIKLPSRVPYGFHGTFIHSKDLRKQA

Annotated regions:
Protein sequence:
MIDAEGFRANVGIVICNGHGQVFWARRINQQSWQFPQGGIHEGETPEQAMYRELYEEVGLKPEQVEILYTSRQWLRYRLPKRLIRREQRPMCVGQKQKWFLLRLKCREEDVDVLHSGHPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFATQAMPFRASGGRQHRRKR

Annotated regions:
phrase: WQFPQGGIHEGETP
type: DOMAIN
name: Nudix_hydrolase
description: NUDIX hydrolase

phrase: EQAMYRELYEEVGLK
type: DOMAIN
name: Nudix_hydrolase
description: NUDIX hydrolase

phrase: GFRANVGIVICNGHGQVFWARRINQQSWQFPQGGIHEGETPEQAMYRELYEEVGLKPEQVEILYTSRQWLRYRLPKRLIRREQRPMCVGQKQKWFLLRLKCREEDVDVLHSGHPEFDGWRWVSYWYPVRQVVSFKRDVYRRVM
type: DOMAIN
name: NUDIX_hydrolase_dom
description: NUDIX hydrolase domain

phrase: GGIHEGETPEQAMYRELYEEV
type: CONSERVED_SITE
name: NUDIX_hydrolase_CS
description: NUDIX hydrolase, conserved site

phrase: FRANVGIVICNGHGQVFWARRINQQSWQFPQGGIHEGETPEQAMYRELYEEVGLKPEQVEILYTSRQWLRYRLPKRLIRREQRPMCVGQKQKWFLLRLKCREEDVDVLHSGHPEFDGWRWVSYWYPVRQVVSFKR
type: DOMAIN
name: NUDIX_hydrolase_dom
description: NUDIX hydrolase domain
Protein sequence:
MRDAVTSLIKNYDVAGRYFDRNAIESLKSYFESGTQRVQAAKAINANAAAIVKQTGSKLFDEQPELIRPGGNAYTTRRYAACLRDLDYYLRYATYAIVAGSMDVLDERVLQGLRETYNSLGVPIGPTVRGIQIMKEIVKEQLGAAGIPNTSFVDEPFDYMTRELGEKDI

Annotated regions:
Protein sequence:
MDFENIKVSDSEVYSIIEEENARQENNIELIASENFTSKAVMEAMGSYLTNKYAEGYPGKRYYGGCYVVDKVEELARERAKKLFKAEHANVQPHSGSQANMAVYFAVLKPGDTIMGMNLTDGGHLTHGSPVNFSGKLFNIIAYGVSDETEQIDYEAFRKKALECKPKMIVSGASAYSRIIDFKKIREICDEVGAYMMVDMAHIAGLVAAGLHPSPIPYADFVTTTTHKTLRGPRGGAIFCKEKYAKDIDKSVFPGMQGGPLMHIIAGKAVCFGEALKDDFKDYAQQIVNNAKVFADELTKYGFRIVSGGTDNHLLLVDLTNKNITGKDAEHLLDSVGITANKNTIPFEKKSPFITSGIRMGTPSVTTRGFKEEEMKKVAYFINYVIEHRDEDLSEIRKQVSELCSGFPIYK

Annotated regions:
phrase: KVSDSEVYSIIEEENARQENNIELIASENFTSKAVMEAMGSYLTNKYAEGYPGKRYYGGCYVVDKVEELARERAKKLFKAEHANVQPHSGSQANMAVYFAVLKPGDTIMGMNLTDGGHLTHGSPVNFSGKLFNIIAYGVSDETEQIDYEAFRKKALECKPKMIVSGASAYSRIIDFKKIREICDEVGAYMMVDMAHIAGLVAAGLHPSPIPYADFVTTTTHKTLRGPRGGAIFCKEKYAKDIDKSVFPGMQGGPLMHIIAGKAVCFGEALKDDFKDYAQQIVNNAKVFADELTKYGFRIVSGGTDNHLLLVDLTNKNITGKDAEHLLDSVGITANKNTIPFEKKSPFITSGIRMGTPSVTTRGFKEEEMKKVAYF
type: DOMAIN
name: SHMT-like_dom
description: Serine hydroxymethyltransferase-like domain

phrase: DFVTTTTHKTLRGPRG
type: BINDING_SITE
name: Ser_HO-MeTrfase_PLP_BS
description: Serine hydroxymethyltransferase, pyridoxal phosphate binding site
Protein sequence:
MKVAVGTVNPVKVNAVKNVFGKLFDNVEVEGRKVGSGVPDQPFGSETIKGAINRAKNAYRTGDYDYGVGIEAGLTDVEGYVLDIQFCAVFDGLDCTTGCGSGFQYPPTVLAEVLTGREVGDVMSELTGIENLGQKMGAIGYLSRGMLDRTQLTEQSVLMAMIPRLNPKLYRQID

Annotated regions:
phrase: GTVNPVKVNAVKNVFGKLFDNVEVEGRKVGSGVPDQPFGSETIKGAINRAKNAYRTGDYDYGVGIEAGLTDVEGYVLDIQFCAVFDGLDCTTGCGSGFQYPPTVLAEVLTGREVGDVMSELTGIENLGQKMGAIGYLSRGMLDRTQLTEQSVLMAMIPR
type: DOMAIN
name: NTPase/PRRC1
description: Non-canonical purine NTP phosphatase/PRRC1
Protein sequence:
MSDRVDVGNLRVARVLYDFITNEALPGTGVDADAFWAGVDKVVTDLAPRNRELLERRDDLQTQVDRWHRQRAIEPLDGAAYQDFLTEIGYLVPEPEDFTITTANVDDEITTTAGPQLVVPILNARFALNAANARWGSLYDALYGTDVIPEADGAEKASADTGGYNKVRGDKVIAYAREVLDGAAPLASGSWKDAVGLKIDDGQLLVELGDEFSTGLQNPDQFVGYTGKLGKPQWSVLLINHGLHIEVLIDPDSPIGSTDKAGIKDVVLESAITTIMDFEDSVAAVDAEDKVLGYRNWLGLNKGDLSEEVSKGGKTFTRVLNEDRVFTTPDGKGELTLPGRSLLFVRNVGHLMTNDAIVDAAGNEMPEGIQDALFTSLIAIHGLRSGKKNGPLKNSRTGSIYIVKPKMHGPEEVAFTAELFGRVEEVLGLPHATLKVGIMDEERRTTVNLKAAIKAASDRVVFINTGFLDRTGDEIHTSMEAGPMCRKAVMKSQPWILAYEDHNVDTGLGAGLAGKAQIGKGMWAMPDLMADMVAQKIAQPRAGATTAWVPSPTAATLHALHYHQVDVKAVDQELAGKHRAKLESLLTIPLAESRHDWTAEDIREEIDNNCQSILGYVVRWIDQGVGCSKVPDIHDVALMEDRATLRISSQLLANWLRHDVITEDEVVEGLKRMAPVVDRQNAGDKEYRPMAPDFDSNIAFQAAKELILEGKDQPNGYTEPILHRRRREYKAAAAK

Annotated regions:
phrase: DIREEIDNNCQSILGYVVRWIDQGVGCSKVPDIHDVALMEDRATLRISSQLLANWLRHDVITEDEVVEGLKRMAPVVDRQNAGDKEYRPMAPDFD
type: DOMAIN
name: MS_C
description: Malate synthase, C-terminal domain

phrase: YNKVRGDKVIAYAREVLDGAAPLASGSWKDAVGLKIDDGQLLVELGDEFSTGLQNPDQFVGYTGKLGKPQWSVL
type: DOMAIN
name: MSG_insertion
description: Malate synthase G, alpha-beta insertion domain

phrase: LYDFITNEALPGTGVDADAFWAGVDKVVTDLAPRNRELLERRDDLQTQVDRWHRQRAIE
type: DOMAIN
name: MS_N
description: Malate synthase, N-terminal domain

phrase: LFVRNVGHLMTNDAIVDAAGNEMPEGIQDALFTSLIAIHGLRSGKKNGPLKNSRTGSIYIVKPKMHGPEEVAFTAELFGRVEEVLGLPHATLKVGIMDEERRTTVNLKAAIKAASDRVVFINTGFLDRTGDEIHTSMEAGPMCRKAVMKSQPWILAYEDHNVDTGLGAGLAGKAQIGKGMWAMPDLMADMVAQKIAQPRAGATTAWVPSPTAATLHALHYHQVDVKAVDQELAGKHRA
type: DOMAIN
name: Malate_synthase_TIM
description: Malate synthase, TIM barrel domain
Protein sequence:
MEWNESLLRLTVAFVLGSTLGIERQWRQRMAGLRTNTLVAIGAALFVIVSVLTNHDSSPTRIPAQIVSGIGFLAGGVILKEGLTVKGLNTAATLWCSAAVGTLCGQGLFSEAVLGSMMVLVANIALRPLSTFINHQPMHSTELECHYLCHLVCRGDEEANVRRILLDSLAEIKNIKLRSLRSHDLDEFNHFVEVEAAIICTARKDKFLEAVISKLSLNPSVKSVSWQALEQESG

Annotated regions:
phrase: LTVAFVLGSTLGIERQWRQRMAGLRTNTLVAIGAALFVIVSVLTNHDSSPTRIPAQIVSGIGFLAGGVILKEGLTVKGLNTAATLWCSAAVGTLCGQGLFSEAVLGSMMVLVANIALRPLS
type: DOMAIN
name: MgtC_SapB_SrpB_YhiD_N
description: MgtC/SapB/SrpB/YhiD, N-terminal domain

phrase: YLCHLVCRGDEEANVRRILLDSLAEIKNIKLRSLRSHDLDEFNHFVEVEAAIICTARKDKFLEAVISKLSLNPSVKSVS
type: DOMAIN
name: MgtC-like_C
description: MgtC-like, C-terminal domain
Protein sequence:
MPDADQNPSAVSSGGDREHIFAQTPESLSRWCETNRVPGYRAKQILDWVYAKGVIDPGQMSNLSASDRERLADGFTFLSGRTVRHQVASDGTQKLLIQWEPGRRGGAEAGGGEGVRLPVLGAGVGGGEGDDPSRQTECVLIPTEARQTACISSQIGCPVGCTFCASGLGGLEGNLSAGRIVEQVWRLRSLIPRPAGGAGKPGALPRISNVVFMGMGEPLANFSNVTSAIRTLASPWGMGISARKITISTVGLPAAIDRLAAQFELPVTLALSLHAPTDEIRRRLIPWAQYSTIEELLRSCQRWFEKTGREITLEYTLLRGVNDRPSHARALAEIASTVRANINLIRYNEVEGMPFGRPADEDVRAFQAVLKERGINAHIRASRGRDISAACGQLRHETGPKAPPHPPHLSHPSPHPSPRSPRQAPHHDSSPTGTAAVPPPPPPGPLASAEAGGEEP

Annotated regions:
phrase: TEARQTACISSQIGCPVGCTFCASGLGGLEGNLSAGRIVEQVWRLRSLIPRPAGGAGKPGALPRISNVVFMGMGEPLANFSNVTSAIRTLASPWGMGISARKITISTVGLPAAIDRLAAQFELPVTLALSLHAPTDEIRRRLIPWAQYSTIEELLRSCQRWFEKTGREITLEYTLLRGVNDRPSHARALAEIASTVRANINLIRYNEVEGMPFGRPADEDVRAFQAVLKERGINAHIRASRG
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TPESLSRWCETNRVPGYRAKQILDWVYAKGVIDPGQMSNLSASDRERLA
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: SSQIGCPVGCTFCASGLGGLEGNLSAGRIVEQVWRLRSLIPRPAGGAGKPGALPRISNVVFMGMGEPLANFSNVTSAIRTLASPWGMGISARKITISTVGLPAAIDRLAAQFELPVTLALSLHAPTDEIRRRLIPWAQYSTIEELLRSCQRWFEKTGREITLEYTLLRGVND
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MLYQWLYSMADEFSPLNVFRYITVRTFIAFFTAFLLCWIWGPHFIKRLQLKHFGQAIRDDGPQTHKKKAGTPTMGGGLILLSTLIPCLLWVDMMNPLVWGVLIVTWGFGLIGYMDDWLKVSKKNSKGLSGKIRLAGEFLISGLVVAALVHFHGLSTAVTIPFMKSVSIDLGYFYVIFAALVVVGTANAVNLTDGLDGLAIVPVMISAATLGLFAYVTGHFSIANYLQIPHVVGAGELSIVAATIVAAGMGFLWFNAYPAQVFMGDVGSLSLGGFLGSMAVITQNELLMLVLGGVFVVEALSVITQVISFKMTGKRVFKMAPIHHHFELGGLTETKIIVRFWIISILLAVLSLATLKLR

Annotated regions:
phrase: NAVNLTDGLDG
type: CONSERVED_SITE
name: PNAcMuramoyl-5peptid_Trfase_CS
description: Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site
Protein sequence:
MTSLSQEALLVRAALEAEGLETPLVANALNGQQKKEKIEGHMRAIMETLGLDLTDDSLAETPHRIAKMYVNEIFSGLDYSTFPKVTVIENKMKVDEMIMVRDISLTSTCEHHFVTIDGLAHVAYIPRGKVIGLSKINRIVQFFARRPQVQERLTQQILLALQTLLGTKDVAISIKATHFCVKARGVMDSTSYTTTTSLGGVFKTQPDTRAEFLGGLKG

Annotated regions:
phrase: IEGHMRAIMETLGLDLTDDSLAETPHRIAKMYVNEIFSGLDYSTFPKVTVIENKMKVDEMIMVRDISLTSTCEHHFVTIDGLAHVAYIPRGKVIGLSKINRIVQFFARRPQVQERLTQQILLALQTLLGTKDVAISIKATHFCVKARGVMDSTSYTTTTSLGGVFKTQPDTRAEFL
type: DOMAIN
name: GTP_CycHdrlase_I_dom
description: GTP cyclohydrolase I domain

phrase: EMIMVRDISLTSTCEH
type: CONSERVED_SITE
name: GTP_CycHdrlase_I_CS
description: GTP cyclohydrolase I, conserved site

phrase: ARRPQVQERL
type: CONSERVED_SITE
name: GTP_CycHdrlase_I_CS
description: GTP cyclohydrolase I, conserved site
Protein sequence:
MPRSLKKGPFVDDHLLKKVDVQNEKNTKQVIKTWSRRSTIIPDFIGHTFAVHDGRKHVPVFVTESMVGHKLGEFAPTRTFKGHIKDDRKSKRR

Annotated regions:
phrase: DGRKHVPVFVTESMVGHKLGEFAP
type: CONSERVED_SITE
name: Ribosomal_uS19_CS
description: Small ribosomal subunit protein uS19, conserved site
Protein sequence:
MLMKTTAVHAPASQGTSGIVLDSLRVAYHGNVVLKPLSLTIEPGEVLALIGPSGSGKTTVLRAVAGFVQPAGGRILIGDTDVTHLPPYKRGLAMVVQNYALFPHLKVEDNVAFGLRAQKQPKALINERVTQALKTVGMSDYAARYPHQLSGGQQQRVAIARAIAVRPRVLLLDEPLSALDAQIRHNMVEELARLHRELPELTILYVTHDQTEALTLADKIGIMKDGSLIAHGETRALYQHPPNRFASEFLGRANILSAIALGITEAPGLVHVSCGGAVIRAFSRGSHHGYNKLLCIRPQHLSLTPRSAYSNRFNATLQSVHWQGDLTHLLCDVAGETVRMVLTHVNPLPRVGDKLALWFEPDDAVLIEV

Annotated regions:
phrase: LCIRPQHLSLTPRSAYSNRFNATLQSVHWQGDLTHLLCDVAGETVRMVLTHVNPLPRVGDKLALWFEPDDAV
type: DOMAIN
name: Transp-assoc_OB_typ2
description: Transport-associated OB, type 2

phrase: PGEVLALIGPSGSGKTTVLRAVAGFVQPAGGRILIGDTDVTHLPPYKRGLAMVVQNYALFPHLKVEDNVAFGLRAQKQPKALINERVTQALKTVGMSDYAARYPHQLSGGQQQRVAIARAIAVRPRVLLLDEPLSALDAQIRHNMVEELARLHRELPELTILYVTHDQTEALTLADKIGIMKDG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LSGGQQQRVAIARA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: IVLDSLRVAYHGNVVLKPLSLTIEPGEVLALIGPSGSGKTTVLRAVAGFVQPAGGRILIGDTDVTHLPPYKRGLAMVVQNYALFPHLKVEDNVAFGLRAQKQPKALINERVTQALKTVGMSDYAARYPHQLSGGQQQRVAIARAIAVRPRVLLLDEPLSALDAQIRHNMVEELARLHRELPELTILYVTHDQTEALTLADKIGIMKDGSLIAHGETRALYQHPPNRFASEF
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: LKPLSLTIEPGEVLALIGPSGSGKTTVLRAVAGFVQPAGGRILIGDTDVTHLPPYKRGLAMVVQNYALFPHLKVEDNVAFGLRAQKQPKALINERVTQALKTVGMSDYAARYPHQLSGGQQQRVAIARAIAVRPRVLLLDEP
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain
Protein sequence:
MRSHTIKKPFERSGVGLHSGITTQVKVLPAKPGEGRYFVRVDLPQQPIIPAKLAYVNQTPLSTELKSPQGSVRTVEHLLAALSGSGINDVRIEIDGPEVPLLDGSAQQWIEAIASAGMIELTDEETTPTVMISSPISVQEGDAFVLALPARELRFTYGIDFAYSVIGNQWYSWNPASESFAEAIAPARTFGFADQIESLKQAGLIKGGSLENALVCDHQGWVNPPLRFSNEPVRHKLLDLVGDLSLLETIPLAHFLAYKASHKLHIELAKAIHGTVKVSEHHFKGFPENALTS

Annotated regions:
Protein sequence:
MSSKTVTPMMAQYLEIKQDHADALLFYRMGDFYEMFFDDAVEAAAALDIALTKRGKHDDADIPMCGVPVHAAEGYLLTLIRKGFRVAVCEQMEDPAEAKKRGSKSVVRREVVRLVTPGTLTEASLLEARRHNYLAAFAKVRDDSALAWVDISTGEFRVMACPAARLSVDLARLAPREVLLAEGNDLRSLVEEHEAAATELGRASFDSTAAVDRLCRLYGVADLEAFGSFERADLSAMGAIVGYLELTQKGKLPLLRKPVKERAQHGLQIDAATRRNLELTQSLSGGREGALLTVIDRTVTAQGARLLARRLASPSADLSIIRTRHEGVRYALEAPEILDTVRTALRQVPDMDRALSRLALDRGGPRDLAAIRNGLAQAATLAEALPDDALPPLWAQSKSRFFGHDALRDLLEKALIAEPPLLTRDGGFVASGYNVDLDEARQLRDEGRGVIAGMQAEYAEATGIASLKVKHNNVLGYFIETTATHADKMLSPPLSDRFIHRQTTANAVRFTTVELSEMETRILNAGGRALALEKSIFEELRQAVIVAAAELSDCARALAELDVVTALAVLARDEDWCAPKVDDSRAFEISGGRHPVVEAALRASGTPFIRNDCDLSEGAAPIWLLTGPNMAGKSTFLRQNALIAILAQMGSYVPATAARIGLVAQVFSRVGASDDLARGRSTFMVEMVETAAILNQAGDRALVILDEIGRGTATYDGLSIAWATLEHLHGVNRCRALFATHYHEMTGLAAQLSGVENATVAVKEHDGDVIFLHEVRRGAADRSYGVQVAKLAGLPPSVVARAREVLKTLESGERSGGNPAKALLEDLPLFANAAPPPPPAAPTSALEARLADISPDALSPREALDLVYELKSLADRD

Annotated regions:
phrase: WLLTGPNMAGKSTFLRQNALIAILAQMGSYVPATAARIGLVAQVFSRVGASDDLARGRSTFMVEMVETAAILNQAGDRALVILDEIGRGTATYDGLSIAWATLEHLHGVNRCRALFATHYHEMTGLAAQLSGVENATVAVKEHDGDVIFLHEVRRGAADRSYGVQVAKLAGLPPSVVARAREVLKTL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: ALVILDEIGRGTATYD
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: GYNVDLDEARQLRDEGRGVIAGMQAEYAEATGIASLKVKHNNVLGYFIETTATHADKMLSPPLSDRFIHRQTTANAVRFTTVELSEMETRILN
type: DOMAIN
name: DNA_mismatch_repair_MutS_clamp
description: DNA mismatch repair protein MutS, clamp

phrase: NYLAAFAKVRDDSALAWVDISTGEFRVMACPAARLSVDLARLAPREVLLAEGNDLRSLVEEHEAAATELGRASFDSTAAVDRLCRLYGVADLEAFGSFERADLSAMGAIVGYLELTQKGKLPL
type: DOMAIN
name: DNA_mmatch_repair_MutS_con_dom
description: DNA mismatch repair protein MutS, connector domain

phrase: ATRRNLELTQSLSGGREGALLTVIDRTVTAQGARLLARRLASPSADLSIIRTRHEGVRYALEAPEILDTVRTALRQVPDMDRALSRLALDRGGPRDLAAIRNGLAQAATLAEALPDDALPPLWAQSKSRFFGHDALRDLLEKALIAEPPLLTRDGGFVASGYNVDLDEARQLRDEGRGVIAGMQAEYAEATGIASLKVKHNNVLGYFIETTATHADKMLSPPLSDRFIHRQTTANAVRFTTVELSEMETRILNAGGRALALEKSIFEELRQAVIVAAAELSDCARALAELDVVTAL
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: TPMMAQYLEIKQDHADALLFYRMGDFYEMFFDDAVEAAAALDIALTKRGKHDDADIPMCGVPVHAAEGYLLTLIRKGFRVAVCEQMEDPAEAKKRGSKSVVRREVVRLVTPGTLTE
type: DOMAIN
name: DNA_mismatch_repair_MutS-lik_N
description: DNA mismatch repair protein MutS-like, N-terminal

phrase: APIWLLTGPNMAGKSTFLRQNALIAILAQMGSYVPATAARIGLVAQVFSRVGASDDLARGRSTFMVEMVETAAILNQAGDRALVILDEIGRGTATYDGLSIAWATLEHLHGVNRCRALFATHYHEMTGLAAQLSGVENATVAVKEHDGDVIFLHEVRRGAADRSYGVQVAKLAGLPPSVVARAREVL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: GREGALLTVIDRTVTAQGARLLARRLASPSADLSIIRTRHEGVRYALEAPEILDTVRTALRQVPDMDRALSRLALDRGGPRDLAAIRNGLAQAATLAEALPDDALPPLWAQSKSRFFGHDALRDLLEKALIAEPPLLTRDGGFVASGYNVDLDEARQLRDEGRGVIAGMQAEYAEATGIASLKVKHNNVLGYFIETTATHADKMLSPPLSDRFIHRQTTANAVRFTTVELSEMETRILNAGGRALALEKSIFEELRQAVIVAAAELSDCARALAELDVVTALAVLARDEDWCAPKVDDSRAFEISGGRHPVVEA
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core
Protein sequence:
MKVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEKAVEVAIDYDESAYAFEFFEKKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLERLQNRHKEILEEKAKLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIEVTCKEKRNPGELVKVEIISHSKGRLMAATKGN

Annotated regions:
phrase: MKVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVLGARNVSKISQVIHKEK
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: KKAQIRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLERLQNRHKEILE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: NISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTME
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: KLEVGKTHVVLVENRREMDNQIVGFEGRSDTGKFIEVTCKEKRNPGELVKVEIISHSKGRLMAATK
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: LNISIGCDKKCAYCIVPHTR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: KVYIETMGCAMNSRDSEHLLSELSKLDYKETNDPKTADLILINTCSVREKPERKLFSEIGQFAKIKKPNAKIGVCGCTASHMGADILKKAPSVSFVL
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: IRSLLNISIGCDKKCAYCIVPHTRGKEISIPMDLILKEAEKLANNGTKELMLLGQNVNNYGARFSSEHAKVDFSDLLDKLSEIQGIERIRFTSPHPLHMNDGFLERFAKNPKVCKSIHMPLQSGSSAVLKMMRRGYSKEWFLNRVERLKALVPEVGISTDIIVGFPNESDKDFEDTMEVLEKVRFDTLYSFIYSPRPFTEAGAWKERVPLEVSSSRLERLQ
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain
Protein sequence:
MEENLERTESLAREADDCHPIFRIAPSTVEFNKLRKRLLRHIRQAFDDFSMLSSGKKWLVALSGGKDSYGLLALLLDLKWRGLLPVEILACNLDQGQPGFPKHILPDFLNSYQIPHRIEYQDTYSIVTDKLVHTQTYCSLCSRLRRGNLYRIAREEGCSALVLGHHRDDVLETFFMNLFHGGRLAAMPGKLINDEGDLFVLRPLVYAAEEDMEKFSQAMQFPIIPCNLCGSQDGLQRNAMKEMLKDIERKMPGRKDTMIRALTNVRPSHLLDKKFFDFKNLF

Annotated regions:
phrase: KWLVALSGGKDSYGLLALLLDLKWRGLLPVEILACNLDQGQPGFPKHILPDFLNSYQIPHRIEYQDTYSIVTDKLVHTQTYCSLCSRLRRGNLYRIAREEGCSALVLGHHRDDVLETFFMNLFHGGRLAAMPGKLINDEGDLFVLRPLVYAAEEDMEKFSQAMQ
type: DOMAIN
name: TilS/TtcA_N
description: tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal