nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSRTSSAPSQKSLISRALKAERDVITASSQSQALDAAIDAAEHYMKALALTSSSKDRNVLDAKCKEWLTRAEKIKGSEDWRSVAQSRRSRLRTPASTRKLTTREDIILLQGAKLNGFIFPPWKAEPSLTEFETGTNGDVLFTDKPDLHLSNLQRDIFAGWKRPHELLSGQVDDAGMPLNPVMTVSGNTDLVQDVLTDCSVVASLCATTSRSERGLDDTLLPIVYPCIHNSMKSDISPSGKYIFRFYFNGCFRKVVIDDRLPSSKTSRSLYMIDRNHRNFMWPALVEKAYLKLRGGYEFPGSNSGTDLWVLTGWIPEQVFLHSDEVTADQIWSDLFKSFHSGDVLLTIGTGKLTEREQKELGLVSEHDYAILDMKELKGRRQFLIKNPWAGTDAVYPALFADPGPFPNSPFLSPGTFWMDCEMVLQNFENLYLNWNPGIFAYQEDIHFTWDLSTGKGMAGCFVKNPQFSVYTERGGVVWLLLGRHLRTIESRASEEDERFGFISIYVFKGGKRVALSDGALHRGPYVDSPNTLMKLDVPPRSTYTAVVSEESLPRVSQNFTISAFSDSPVRISHAPNKYICVTKVQGSWTPTTAGGNAESARYSLNPQFSIVLSDPTDISIVLEPSDQELATHVKLFWSGGKRIARVRSRDIVADSGDYRRGGSLVEKQDLDPGEYTIVVSTFAPDQYGSFTLWVSTNITCEVTQLPSEAAGRRAVLSDIGVLLPGQDRMLAPLTTPRLTRVKLIARSRESRIGNRPVGPSPLLMTVELGQGPYKEILATSEDGDHSDSISGVRVEDFDLQPGLEERGGVWIVLERIGGPGGQVEDHFEVEALGEERVEIGEWIVEDA

Annotated regions:
phrase: TREDIILLQGAKLNGFIFPPWKAEPSLTEFETGTNGDVLFTDKPDLHLSNLQRDIFAGWKRPHELLSGQVDDAGMPLNPVMTVSGNTDLVQDVLTDCSVVASLCATTSRSERGLDDTLLPIVYPCIHNSMKSDISPSGKYIFRFYFNGCFRKVVIDDRLPSSKTSRSLYMIDRNHRNFMWPALVEKAYLKLRGGYEFPGSNSGTDLWVLTGWIPEQVFLHSDEVTADQIWSDLFKSFHSGDVLLTIGTGKLTEREQKELGLVSEHDYAILDMKELKGRRQFLIKNPWAGTDAVYPALFADPGPFPNSPFLSPGTFWMDCEMVLQNFENLYLN
type: DOMAIN
name: Peptidase_C2_calpain_cat
description: Peptidase C2, calpain, catalytic domain

phrase: AGWKRPHELLSGQVDDAGMPLNPVMTVSGNTDLVQDVLTDCSVVASLCATTSRSERGLDDTLLPIVYPCIHNSMKSDISPSGKYIFRFYFNGCFRKVVIDDRLPSSKTSRSLYMIDRNHRNFMWPALVEKAYLKLRGGYEFPGSNSGTDLWVLTGWIPEQVFLHSDEVTADQIWSDLFKSFHSGDVLLTIGTGKLTEREQKELGLVSEHDYAILDMKELKGRRQFLIKNPWA
type: DOMAIN
name: Peptidase_C2_calpain_cat
description: Peptidase C2, calpain, catalytic domain

phrase: SRDIVADSGDYRRGGSLVEKQDLDPGEYTIVVSTFAPDQYGSFTL
type: DOMAIN
name: Calpain_domain_III
description: Peptidase C2, calpain, large subunit, domain III

phrase: GFIFPPWKAEPSLTEFETGTNGDVLFTDKPDLHLSNLQRDIFAGWKRPHELLSGQVDDAGMPLNPVMTVSGNTDLVQDVLTDCSVVASLCATTSRSERGLDDTLLPIVYPCIHNSMKSDISPSGKYIFRFYFNGCFRKVVIDDRLPSSKTSRSLYMIDRNHRNFMWPALVEKAYLKLRGGYEFPGSNSGTDLWVLTGWIPEQVFLHSDEVTADQIWSDLFKSFHSGDVLLTIGTGKLTEREQKELGLVSEHDYAILDMKELKGRRQFLIKNPWAGTDAVYPALFADPGPFPNSPFLSPGTFWMDCEMVLQNFENLYLNWN
type: DOMAIN
name: Peptidase_C2_calpain_cat
description: Peptidase C2, calpain, catalytic domain

phrase: FIFPPWKAEPSLTEFETGTNGDVLFTDKPDLHLSNLQRDIFAGWKRPHELLSGQVDDAGMPLNPVMTVSGNTDLVQDVLTDCSVVASLCATTSRSERGLDDTLLPIVYPCIHNSMKSDISPSGKYIFRFYFNGCFRKVVIDDRLPSSKTSRSLYMIDRNHRNFMWPALVEKAYLKLRGGYEFPGSNSGTDLWVLTGWIPEQVFLHSDEVTADQIWSDLFKSFHSGDVLLTIGTGKLTEREQKELGLVSEHDYAILDMKELKGRRQFLIKNPWAGTDAVYPALFADPGPFPNSPFLSPGTFWMDCEMVLQNFENLYLNWNPGIFAYQ
type: DOMAIN
name: Peptidase_C2_calpain_cat
description: Peptidase C2, calpain, catalytic domain

phrase: RTSSAPSQKSLISRALKAERDVITASSQSQALDAAIDAAEHYMKALALTSSSKDRNVLDAKCKEWLTRAEKIKGSEDWRSV
type: DOMAIN
name: MIT_dom
description: MIT domain

phrase: YICVTKVQGSWTPTTAGGNAESARYSLNPQFSIVLSDPTDISIVLEPSDQELATHVKLFWSGGKRIARVRSRDIVADSGDYRRGGSLVEKQDLDPGEYTIVVSTFAPDQYGSFTLWVSTNITCEV
type: DOMAIN
name: Calpain_III
description: Peptidase C2, calpain, domain III
Protein sequence:
MTDQENNNNISSNPFAALFGSLADAKQFAAIQKEQLKQQSDELPASPDDSDNSVSESLDEFDYSVAEISRSFRSQQEICEQLNINHMIQRIFLITLDNSDPSLKSGNGIPSRCVYLEEMAVELEDQDWLDMGNVEQALFARLLLQDPGNHLINMTSSTTLNLSADRDAGERHIFCYLYSCFQRAKEEITKVPENLLPFAVQCRNLTVSNTRTVLLTPEIYVDQNIHEQLVDLMLEAIQGAHFEDVTEFLEEVIEALILDEEVRTFSEVMIPVFDILLGRIKDLELCQILLYAYLDILLYFTRQKDMAKVFVEYIQPKDPTNGQMYQKTLLGVILNISCLLKTPGVVENHGYFLNPSRSSPQEIKVQEANIHQFMAQFHEKIYQMLKNLLQLSPETKHCILSWLGNCLHANAGRTKIWANQMPEIFFQMYASDAFFLNLGAALLKLCQPFCKPRSSRLLTFNPTYCALKELNDEERKIKNVHMRGLDKETCLIPAVQEPKFPQNYNLVTENLALTEYTLYLGFHRLHDQMVKINQNLHRLQVAWRDAQQSSSPAADSLREQFERLMTIYLSTKTAMTEPQMLQNCLNLQVSMAVLLVQLAIGNEGSQPIELTFPLPDGYSSLAYVPEFFADNLGDFLIFLRRFADDILETSADSLEHVLHFITIFTGSIERMKNPHLRAKLAEVLEAVMPHLDQTPNPLVSSVFHRKRVFCNFQYAPQLAEALIKVFVDIEFTGDPHQFEQKFNYRRPMYPILRYMWGTDTYRESIKDLADYASKNLEAMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKIKIQQIEKDRGEWDSLTPEARREKEAGLQMFGQLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICTIYLNLGDEENFCATVPKDGRSYSPTLFAQTVRVLKKINKPGNMIVAFSNLAERIKSLADLQQQEEETYADACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWLAERKQQKEQLE

Annotated regions:
phrase: LGVILNISCLLKTPGVVENHGYFLNPSRSSPQEIKVQEANIHQFMAQFHEKIYQMLKNLLQLSPETKHCILSWLGNCLHANAGRTKIWANQMPEIFFQMYASDAFFLNLGAALLKLCQPFCKPRSSRLLTFNPTYCALKELNDEERKIKNVHMRGLDKETCLIPAVQEPKFPQNYNLVTENLALTEYTLYLGFHRLHDQMVKINQNLHRLQVAWRDAQQSSSPAADSLREQFERLMTIYLSTKTAMTEPQMLQNCLNLQVSMAVLLVQLAIGNEGSQPIELTFPLPDGYSSLAYVPEFFADNLGDFLIFLRRFADDILETSADSLEHVLHFITIFTGSIERMKNPHLRAKLAEVLEAVMPHLDQTPNPLVSSVFHRKRVFCNFQYAPQLAEALIKVFVDIEFTGDPHQFEQKFNYRRPMYPILRYMWGTDTYRESIKDLADYASKNLEAMNPPLFLRFLNLLMNDAIFLLDEAIQYLSKIKIQQIEKDRGEWDSLTPEARREKEAGLQMFGQLARFHNIMSNETIGTLAFLTSEIKSLFVHPFLAERIISMLNYFLQHLVGPKMGALKVKDFSEFDFKPQQLVSDICTIYLNLGDEENFCATVPKDGRSYSPTLFAQTVRVLKKINKPGNMIVAFSNLAER
type: DOMAIN
name: Ub_conjug_fac_E4_core
description: Ubiquitin conjugation factor E4, core

phrase: EFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQR
type: DOMAIN
name: Ubox_domain
description: U-box domain

phrase: DACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWLAERKQ
type: DOMAIN
name: Ubox_domain
description: U-box domain

phrase: ACDEFLDPIMSTLMCDPVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQRWLAER
type: DOMAIN
name: Ubox_domain
description: U-box domain
Protein sequence:
MLVLTETSVGFVVFKLSSDAKIDNKDLWKEFETPEGANKALKVQAIQRFTSTASAVEDLTAVQDGRLTDSLSRFLLDTVGGADDGEKKKKKKKIEEMLVVSDPKLAGTINKALSIPVLSDSSTQDLYRGIRQQLASLLGGVDQKDLNTMSLGLGHSLSRFKLKFSTDKVDTMVIQAIALLDDLDKEINIYAMRVKEWYGWHFPEMAKIIVDNIAFARVVKAMGFRTNAVTTDFSLLLPEDLEATLKSAAELSMGTEISDSDMTHIHSLCDQVISISEYRTQLSEYLRNRMQAIAPNLTALVGELVGARLISHAGSLMNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAPQKLKGKMARMVATKAALSIRVDALSDADSRSDVSAAEVGISNRVKLESRLRALEHQAGIQSVRKVVSANGQQGRQQPRFEMSGVTGSYNAATDNVPLNGDLLPTQPATEEVKEEKDEKKDKKKKRKSEVAEAGDVTMDGDADLSMVAGETKEERRARKEAKKAAKAAKKAAEESGDGDKKSKKRRADEDEDSEKKKKKKKKDE

Annotated regions:
phrase: LLDDLDKEINIYAMRVKEWYGWHFPEMAKIIVDNIAFARVVKAMGFRTNAVTTDFSLLLPEDLEATLKSAAELSMGTEISDSDMTHIHSLCDQVISISEYRTQLSEYLRNRMQAIAPNLTALVGELVGARLISHAGSLMNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAPQKLKGKMARMVATKAALSIRVDALSDADSRSDVSAAEVGISNRVKLESR
type: DOMAIN
name: Nop_dom
description: Nop domain

phrase: LVLTETSVGFVVFKLSSDAKIDNKDLWKEFETPEGANKALKVQAIQRFTSTASAVEDLTAVQD
type: DOMAIN
name: NOP58/56_N
description: Nucleolar protein 58/56, N-terminal

phrase: MVIQAIALLDDLDKEINIYAMRVKEWYGWHFPEMAKIIVDNIAFARVVKAMG
type: DOMAIN
name: NOSIC
description: NOSIC

phrase: IAPNLTALVGELVGARLISHAGSLMNLAKHPASTVQILGAEKALFRALKTKHDTPKYGLIYHASLIGQAPQKLKGKMARMVATKAALSIRVDALSDADSRSDVSAAEVGISNRVKLESRLRALE
type: DOMAIN
name: Nop_dom
description: Nop domain
Protein sequence:
MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVIVPVEVEAAVA

Annotated regions:
phrase: KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVIVP
type: DOMAIN
name: CSD
description: Cold-shock domain

phrase: KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVI
type: DOMAIN
name: CSP_DNA-bd
description: Cold-shock protein Csp, DNA-binding

phrase: KGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVIV
type: DOMAIN
name: CSP_DNA-bd
description: Cold-shock protein Csp, DNA-binding

phrase: MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKAGQSVQFDVHQGPKGNHASVIV
type: DOMAIN
name: CSP_DNA-bd
description: Cold-shock protein Csp, DNA-binding

phrase: GTVKWFNNAKGFGFI
type: DOMAIN
name: CSP_DNA-bd
description: Cold-shock protein Csp, DNA-binding

phrase: EDIFAHYST
type: DOMAIN
name: CSP_DNA-bd
description: Cold-shock protein Csp, DNA-binding

phrase: RTLKAGQSVQFDVHQGPK
type: DOMAIN
name: CSP_DNA-bd
description: Cold-shock protein Csp, DNA-binding

phrase: FGFICPEGGGEDIFAHYST
type: CONSERVED_SITE
name: CSD_CS
description: Cold-shock domain, conserved site
Protein sequence:
MATHLFTSESVSEGHPDKIADQISDAVLDAILEQDPRARVACETYVKTGMVLVGGEVTTSAWVDIEELTRNTVKEIGYTHSDMGFDADSCAVLNAIGKQSPDINQGVDRASLEEQGAGDQGLMFGYASDETDVLMPAPITYSHRLVQKQAEVRKSGKLDWLRPDAKSQITFKYENDKPVGIDAVVLSTQHCDSVSTETVREAVMEEIIKPVLPSEWIDGNTRFHINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAKRCEIQVSYAIGVAEPTSISIDTFGTGVVDEKTLVALVREHFDLRPYGLIQMLDLERPIYRPTAAYGHFGRDEFPWEATDKAQALKASL

Annotated regions:
phrase: HLFTSESVSEGHPDKIADQISDAVLDAILEQDPRARVACETYVKTGMVLVGGEVTTSAWVDIEELTRNTVKEIGYTHSDMGFDADSCAVLNAIGKQS
type: DOMAIN
name: S-AdoMet_synt_N
description: S-adenosylmethionine synthetase, N-terminal

phrase: GGGAFSGK
type: CONSERVED_SITE
name: ADOMET_SYNTHASE_CS
description: S-adenosylmethionine synthetase, conserved site

phrase: GAGDQGLMFG
type: CONSERVED_SITE
name: ADOMET_SYNTHASE_CS
description: S-adenosylmethionine synthetase, conserved site

phrase: IGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAKRCEIQVSYAIGVAEPTSISIDTFGTGVVDEKTLVALVREHFDLRPYGLIQMLDLERPIYRPTAAYGHFGRDEFPW
type: DOMAIN
name: S-AdoMet_synt_C
description: S-adenosylmethionine synthetase, C-terminal

phrase: EQGAGDQGLMFGYASDETDVLMPAPITYSHRLVQKQAEVRKSGKLDWLRPDAKSQITFKYENDKPVGIDAVVLSTQHCDSVSTETVREAVMEEIIKPVLPSEWIDGNTRFHINPTGR
type: DOMAIN
name: S-AdoMet_synt_central
description: S-adenosylmethionine synthetase, central domain
Protein sequence:
MLTAVVGLQFGDEGKGKFVDYLSGNINNIARFNGGANAGHCVQHGNLRGSFSQLPASLNKKNLYICQGALISLPILVKEIDFIKKEDIDSHIFIDPRCHIVLPLHAELNRASEKYKGKQKIGSVGVGVGACVEDKANRHGIRLIDTFDKEKLRSKLEFLWSIREKQINHVFNAQASLDFEEMLETTHQYGKRIEPYFTFTNEIIGDLLNSGEDVLLETSQATFLDNSFGTYPYTVAYQTLVQTCFAMIGIPAQKMHIVGVMKSYMIRVGNGPFPTELSTEQADYIRERGNEYGTVSKRPRRCGWLDLSLIKHAVKLNGVIELAITNVDVLAGLDEIKVAVAYEIDDKLVCCDNALLQLDRAKPIYKTFKSWSTLNSSYTDLTELPIELIDFLSFIQDYTGVPIKYISYGPDRNQTLVVK

Annotated regions:
phrase: QFGDEGK
type: BINDING_SITE
name: Adenylosuccin_syn_GTP-bd
description: Adenylosuccinate synthase, GTP-binding site
Protein sequence:
MANSLILGSPINPEGEMMIQFSNNHDNNIEFQRRKKMKKNNPETETDSSSDLSCFVAQTGALLHLPQGFTSSNGSNRECRKSPRPIISSYSSSEKQFVTFTLAPVDGRHCRLRLPMQFTRENGINKPGKIYLVGKDGSKWLANLLLENNRGRMTLGDGWKSFVKANGLKTGDTYTFKLLWEDTTPVLSLCFEEYNTDTRVGEESSKESLPAEPSSQEKIVKDDNNKDESSTWKREGNHLRCKDSTSPSQNCTLTVTITPDSLEHGRLRLPLQFMTENSMNKPGEITLLGTDGAKWMASLLLEKKGRMSLGKGWKDFAKANGLKTGDSITLEPIWEDRTPVLSIKSSSGKGQSEFSKESLSIKPSSGNMTKKVENNREASRKYPPRSRESSSAIQNQFMALTPLRDIVSQVAHDLSIGEVINFRHKGDNMLRVSDLGSNCCGVQDLLAPSSNYDHDNISNISMKINPHIRKEAVTFSSYDGYAHDNFEPPSKKKVKKNNPEMEADYLSDHSCFVSHVTTSSLHTNALSLEVKESLPIEPSIKPNISEDDNNKEEDIIEENSSFEREKNHWICIDSISSSQNRFLTLTITPDSLKHGRLRLPLQFMIENSMNKPGEITVLGKDGAKWLVSLLLERRGRMSLDASSGQETREAEKNREESSSLWELEKRTYCPRKRDSSSDVKNRFLTLTLAPEDVKDGNLHLPCQFMRINGINKPGQITLLGRGGMKWFAYLLSGDGTVVVGNGWKGFCEANGVMLGETFVLEFIPKDDT

Annotated regions:
phrase: RFLTLTLAPEDVKDGNLHLPCQFMRINGINKPGQITLLGRGGMKWFAYLLSGDGTVVVGNGWKGFCEANGVMLGETFVLEFIPK
type: DOMAIN
name: B3_DNA-bd
description: B3 DNA binding domain

phrase: FVTFTLAPVDGRHCRLRLPMQFTRENGINKPGKIYLVGKDGSKWLANLLLENNRGRMTLGDGWKSFVKANGLKTGDTYTFKLLWEDTTPVLSLC
type: DOMAIN
name: B3_DNA-bd
description: B3 DNA binding domain

phrase: FLTLTITPDSLKHGRLRLPLQFMIENSMNKPGEITVLGKDGAKWLVSLLLERRGRMSLDASSGQETREA
type: DOMAIN
name: B3_DNA-bd
description: B3 DNA binding domain

phrase: LTVTITPDSLEHGRLRLPLQFMTENSMNKPGEITLLGTDGAKWMASLLLEKKGRMSLGKGWKDFAKANGLKTGDSITLEPIWEDRTPVLSIKS
type: DOMAIN
name: B3_DNA-bd
description: B3 DNA binding domain

phrase: FLTLTLAPEDVKDGNLHLPCQFMRINGINKPGQITLLGRGGMKWFAYLLSGDGTVVVGNGWKGFCEANGVMLGETFVLEF
type: DOMAIN
name: B3_DNA-bd
description: B3 DNA binding domain

phrase: TLTVTITPDSLEHGRLRLPLQFMTENSMNKPGEITLLGTDGAKWMASLLLEKKGRMSLGKGWKDFAKANGLKTGDSITLEPIWEDRTPVLSIKSS
type: DOMAIN
name: B3_DNA-bd
description: B3 DNA binding domain

phrase: LTVTITPDSLEHGRLRLPLQFMTENSMNKPGEITLLGTDGAKWMASLLLEKKGRMSLGKGWKDFAKANGLKTGDSITLEPIWEDRTPVLS
type: DOMAIN
name: B3_DNA-bd
description: B3 DNA binding domain

phrase: FLTLTITPDSLKHGRLRLPLQFMIENSMNKPGEITVLGKDGAKWLVSLLLERRGRMSLDASSGQETREAEKNREESSSLWELEKRTYCPRKRDS
type: DOMAIN
name: B3_DNA-bd
description: B3 DNA binding domain

phrase: FVTFTLAPVDGRHCRLRLPMQFTRENGINKPGKIYLVGKDGSKWLANLLLENNRGRMTLGDGWKSFVKANGLKTGDTYTFKLLWEDTTPVLSLCFE
type: DOMAIN
name: B3_DNA-bd
description: B3 DNA binding domain

phrase: TLTVTITPDSLEHGRLRLPLQFMTENSMNKPGEITLLGTDGAKWMASLLLEKKGRMSLGKGWKDFAKANGLKTGDSITLEPIWEDRTPVLSIKSS
type: DOMAIN
name: B3_DNA-bd
description: B3 DNA binding domain

phrase: FLTLTLAPEDVKDGNLHLPCQFMRINGINKPGQITLLGRGGMKWFAYLLSGDGTVVVGNGWKGFCEANGVMLGETFVLEFIPKDD
type: DOMAIN
name: B3_DNA-bd
description: B3 DNA binding domain

phrase: FVTFTLAPVDGRHCRLRLPMQFTRENGINKPGKIYLVGKDGSKWLANLLLENNRGRMTLGDGWKSFVKANGLKTGDTYTFKLLWEDTTPVLSLCFE
type: DOMAIN
name: B3_DNA-bd
description: B3 DNA binding domain

phrase: KQFVTFTLAPVDGRHCRLRLPMQFTRENGINKPGKIYLVGKDGSKWLANLLLENNRGRMTLGDGWKSFVKANGLKTGDTYTFKLLWEDTTPVLSL
type: DOMAIN
name: B3_DNA-bd
description: B3 DNA binding domain

phrase: FLTLTLAPEDVKDGNLHLPCQFMRINGINKPGQITLLGRGGMKWFAYLLSGDGTVVVGNGWKGFCEANGVMLGETFVLEFIPKDD
type: DOMAIN
name: B3_DNA-bd
description: B3 DNA binding domain
Protein sequence:
FALAQMVNDLEMVDEFVGKGANGLEIDVTFSSSGQPQYTYHGVPCDCFRSCKRREDFDTYIKYIRHLTTPGDPKFRSNLIMLIFDLKLNGLSQDALRKAGVEMADKLVGNYWQDLAEARAYIVLSMPSIEQSAFVTAFKDELKDFGYDKNLDRIGYDFSGNEDLDETAKVYKQLNINGHIWQADGITNRLPRGDSRLKEAISKRDTPGYQYINKVYTWTIDKASSIANALRLGVDGVMTNYPERVIDALNDSEFSGKFRLATYEDNPWETFKG

Annotated regions:
Protein sequence:
MVKKKGKDNSSREEDEIDLAGPSCRHIKKGTDQTLLKKLSGNSNWTSCQHCKHEENKENISTPVAQNSEEEQETIPIWMCLKCGHIGCGQNSTNRHAIKHYETPRSEPHCLVISLDNWSVWCYICDDEVHYSRTGHLAQLVTNIQKQTSVDPIKRPQSRVKEGDSLLDVDQKTGTVKAEESEDNENKGHQKKTVKKESVAISKKSDCPEDGGGVSVKGLSNLGNTCFFNAVIQNLSQTHILRQTLNKVTEENISLHIKPVSSSDLLCVQAPILTQLGQPGSLTLAMCQLLNEIQQSKKGVVTPRELFTQVCKKAARFKGFQQQDSQELLRYLLDGMRAEESRRVSSGISDALKESRKGTDGDQLKTLVKEYEKNGCPKNFVDQVFGGEMTSTIMCQQCKTVSVVTEMFLDLSLPVSDEAYRKKNLKKAVQSTSESSQDERNSPALTNGNDDDLSGSGSKYQQKKAKKQAKKQAKHQKRQQKIEDRVTLDNLSSASQTESEQTNAAADAKDGENADNATDEEASLSEGSPAQISASEQDQQNLNPVEDKEKEEDVDSVIDCDPSVSNRFTVLSDEQPSKDVVSDADKISEMDLERDEDGTQLESEVEPLEEKEYTVVSQDPELAFCTLATRTAPEKQECSVQSCLFHFTEVETLTQNNSLLCVTCTKVQSNKEKVGGSGSKKNVYTDALKQMLISSPPPVLTLHLKRFQQNGYSICKVNRHVSFPLILDLAPFCVVKCENLTEVDSQVLYSLYGIVEHSGTMRSGHYTA

Annotated regions:
phrase: YSLYGIVEHSGTMRSGH
type: CONSERVED_SITE
name: USP_CS
description: Ubiquitin specific protease, conserved site

phrase: CQHCKHEENKENISTPVAQNSEEEQETIPIWMCLKCGHIGCGQNSTNRHAIKHYETPRSEPHCLVISLDNWSVWCYICDDEVH
type: DOMAIN
name: Znf_UBP
description: Zinc finger, UBP-type

phrase: SCQHCKHEENKENISTPVAQNSEEEQETIPIWMCLKCGHIGCGQNSTNRHAIKHYETPRSEPHCLVISLDNWS
type: DOMAIN
name: Znf_UBP
description: Zinc finger, UBP-type

phrase: PSCRHIKKGTDQTLLKKLSGNSNWTSCQHCKHEENKENISTPVAQNSEEEQETIPIWMCLKCGHIGCGQNSTNRHAIKHYETPRSEPHCLVISLDNWSVWCYICDDEVHYSRTGHLAQLVTNIQKQ
type: DOMAIN
name: Znf_UBP
description: Zinc finger, UBP-type

phrase: GLSNLGNTCFFNAVI
type: CONSERVED_SITE
name: USP_CS
description: Ubiquitin specific protease, conserved site

phrase: KGLSNLGNTCFFNAVIQNLSQTHILRQTLNKVTEENISLHIKPVSSSDLLCVQAPILTQLGQPGSLTLAMCQLLNEIQQSKKGVVTPRELFTQVCKKAARFKGFQQQDSQELLRYLLDGMRAEESRRVSSGISDALKESRKGTDGDQLKTLVKEYEKNGCPKNFVDQVFGGEMTSTIMCQQCKTVSVVTEMFLDLSLPVSDEAYRKKNLKKAVQSTSESSQDERNSPALTNGNDDDLSGSGSKYQQKKAKKQAKKQAKHQKRQQKIEDRVTLDNLSSASQTESEQTNAAADAKDGENADNATDEEASLSEGSPAQISASEQDQQNLNPVEDKEKEEDVDSVIDCDPSVSNRFTVLSDEQPSKDVVSDADKISEMDLERDEDGTQLESEVEPLEEKEYTVVSQDPELAFCTLATRTAPEKQECSVQSCLFHFTEVETLTQNNSLLCVTCTKVQSNKEKVGGSGSKKNVYTDALKQMLISSPPPVLTLHLKRFQQNGYSICKVNRHVSFPLILDLAPFCVVKCENLTEVDSQVLYSLYGIVEHSGTMRSGHYT
type: DOMAIN
name: USP_dom
description: Ubiquitin specific protease domain

phrase: GLSNLGNTCFFNAVIQNLSQTHILRQTLNKVTEENISLHIKPVSSSDLLCVQAPILTQLGQPGSLTLAMCQLLNEIQQSKKGVVTPRELFTQVCKKAARFKGFQQQDSQELLRYLLDGMRAEESRRVSSGISDALKESRKGTDGDQLKTLVKEYEKNGCPKNFVDQVFGGEMTSTIMCQQCKTVSVVTEMFLDLSLPVSDEAYRKKNLKKAVQSTSESSQDERNSPALTNGNDDDLSGSGSKYQQKKAKKQAKKQAKHQKRQQKIEDRVTLDNLSSASQTESEQTNAAADAKDGENADNATDEEASLSEGSPAQISASEQDQQNLNPVEDKEKEEDVDSVIDCDPSVSNRFTVLSDEQPSKDVVSDADKISEMDLERDEDGTQLESEVEPLEEKEYTVVSQDPELAFCTLATRTAPEKQECSVQSCLFHFTEVETLTQNNSLLCVTCTKVQSNKEKVGGSGSKKNVYTDALKQMLISSPPPVLTLHLKRFQQNGYSICKVNRHVSFPLILDLAPFCVVKCENLTEVDSQVLYSLYGIVEHSGTMRSGHYT
type: DOMAIN
name: Peptidase_C19_UCH
description: Peptidase C19, ubiquitin carboxyl-terminal hydrolase
Protein sequence:
MQNAPKCYLPNSRKGRDVNFHDRGPETLKCLYDESEDNNNFTMHSESIGPKSLDSLSPRRLSNYSSAVDPRTTSLEDVPRLILTRSNSQEQTPLRTHTPVEYMSDSIHKSLADLQLGGSSYSVAESPVPVLQSSAVSEADDMASAHSAHPSRKASRSLRLFESSTSNNLETGNSTNTALHNVSSPLESVSERLSKSGSPSVGAQHDLDEVISEKDTSLSRRSSRGRSSAPKRRKDSGSSKTTATYIPHNPSKKSSQHLPLLPDASFELERSVSRSYQSPASTPRSSVSSVSSSPPEDHPFFHWNVDYPVTVRLEPFKHQVGGHTAFFRFSKRAVCKPLTRNENTFYETIEACHPELLPFIPKYIGVLNVTHTITKTEENDSTTEYVNTESSSKTPAPHKHTFNSCYQKKDYGYIPEVSVEQNRHIFPEWMLPDKRSHSYGSPKSLHHKSSSAGERPVSPTFVADIPPKTPWGTTLINRKLREEVLREVFAPKHARRRLGTRFHSRSSHRPSVFRDNSVAFGQLDNGNTSSRARDKDADPNKSLSCSVEDKHYDLHSAVAEENEEVDEELLNVPSNNQGKSYRRFSSDAVWEEPESNEFPRVSGTMEDYDSRESTGHTIKELRSTPNSHGTVPDDSIFAMDNEENSELPPPLEPAEIGDPFRSVNDPRRVLSLPHMASADEDHRIPASDNQNNNNNDANALAENSESQHSTQIERYIVIEDLTSGMKRPCVLDVKMGTRQYGIMATEKKKASQTKKCAMTTSRVLGVRICGMQVWHPWLQSYTFEDKYVGRDIKAGEEFQHALMRYLGKTDDDEDNSHLLVHHIPTIIRKLEQLEQIVRFLKGSRLYASSLLFLYDGEPPPSDKSSKEKVKPREIDIRIVDFANCVFAEDKELLAKATCPPQHKDTYDRGYVRGLRTLRLYFLKIWKEAKGMQIAERGYEDSLSNAYDELGGLMSYSNDDDSCGETST

Annotated regions:
Protein sequence:
MMQASITSILVVLTLVAQDRLAGGLEHKSYDYTKYHTMDEISAWMNQMQRENPDVVSTMTYGQTYEKRNITLLKIGFSSTTPKKAIWMDCGIHAREWIAPAFCQHFVKEVLGSYKTDSRVNMLFKNLDFYITPVLNMDGYIYSWLNNSTRLWRKSRSPCHENSTCSGTDLNRNFYANWGMVGISRNCCSEVYNGATALSEPEAEAVTDFLGAHQNHLLCYLTIHSYGQLILVPYGHPNISAPNYDELMEVGLAAAKAIKAVHGKSYKVGSSPDVLYPNSGSSRDFARLIGIPYSFTFELRDEGQHGFILPEDQIQPTCQEAYEGAMSIINYVHDKNFKNTAITVTATLWTTLMALWISTSHVF

Annotated regions:
phrase: YTKYHTMDEISAWMNQMQRENPDVVSTMTYGQTYEKRNITLLKIGFSSTTPKKAIWMDCGIHAREWIAPAFCQHFVKEVLGSYKTDSRVNMLFKNLDFYITPVLNMDGYIYSWLNNSTRLWRKSRSPCHENSTCSGTDLNRNFYANWGMVGISRNCCSEVYNGATALSEPEAEAVTDFLGAHQNHLLCYLTIHSYGQLILVPYGHPNISAPNYDELMEVGLAAAKAIKAVHGKSYKVGSSPDVLYPNSGSSRDFARLIGIPYSFTFELRDEGQHGFILPEDQIQPTCQEAYEGAMSIINY
type: DOMAIN
name: Carboxypeptidase_O
description: Carboxypeptidase O

phrase: YHTMDEISAWMNQMQRENPDVVSTMTYGQTYEKRNITLLKIGFSSTTPKKAIWMDCGIHAREWIAPAFCQHFVKEVLGSYKTDSRVNMLFKNLDFYITPVLNMDGYIYSWLNNSTRLWRKSRSPCHENSTCSGTDLNRNFYANWGMVGISRNCCSEVYNGATALSEPEAEAVTDFLGAHQNHLLCYLTIHSYGQLILVPYGHPNISAPNYDELMEVGLAAAKAIKAVHGKSYKVGSSPDVLYPNSGSSRDFARLIGIPYSFTFELRDEGQHGFILPEDQIQPTCQ
type: DOMAIN
name: Peptidase_M14
description: Peptidase M14, carboxypeptidase A

phrase: KAIWMDCGIHAREWIAPAFCQH
type: DOMAIN
name: Peptidase_M14
description: Peptidase M14, carboxypeptidase A

phrase: ISAWMNQMQRENPDVVSTMTYGQTYEKRNITLLKIGFSSTTPKKAIWMDCGIHAREWIAPAFCQHFVKEVLGSYKTDSRVNMLFKNLDFYITPVLNMDGYIYSWLNNSTRLWRKSRSPCHENSTCSGTDLNRNFYANWGMVGISRNCCSEVYNGATALSEPEAEAVTDFLGAHQNHLLCYLTIHSYGQLILVPYGHPNISAPNYDELMEVGLAAAKAIKAVHGKSYKVGSSPDVLYPNSGSSRDFARLIGIPYSFTFELRDEGQHGFILPEDQIQPTCQEAY
type: DOMAIN
name: Peptidase_M14
description: Peptidase M14, carboxypeptidase A

phrase: YGQTYEKRNITL
type: DOMAIN
name: Peptidase_M14
description: Peptidase M14, carboxypeptidase A

phrase: KAIWMDCGIHAREW
type: DOMAIN
name: Peptidase_M14
description: Peptidase M14, carboxypeptidase A

phrase: GTDLNRNF
type: DOMAIN
name: Peptidase_M14
description: Peptidase M14, carboxypeptidase A

phrase: LTIHSYGQLILVP
type: DOMAIN
name: Peptidase_M14
description: Peptidase M14, carboxypeptidase A
Protein sequence:
MNKQDFYFDLPSELIAQYPLANRSDSRLLIYNRQTEEYGHYQFREIADFLQPGDLLVMNDSKVIPARLYGHKATGGKVELLVERITGDFTFLAHIKASKSLKSNDFIYLDAGKRLEVLERQDDLFLCKASENILDLLNDLGHIPLPPYIAREDESLDKERYQTVYAKCAGSVAAPTAGLHFDDAVLSSIRARGVNIAYVTLHVGAGTFRPVRCERIQDHKMHSEWFTVSPDLCAAVKAAKSMGNRVIAVGTTALRSLESAAMGGELIPCSRDTDIFIYPGYQFKVCDGLITNFHLPESTLVMLVSAFIGHQECMALYQEAIDKRYRFFSYGDASLLL

Annotated regions:
Protein sequence:
MKLHELKPAEGSRKVRNRVGRGIGSGNGKTAGKGHKGQNARSGGGVRLGFEGGQTPLFRRLPKRGFTNINRKEFTIVNLSTLNRFEDGTEVTPELLLETGVISKLNDGVKILASGAVEKKLTVKAHKFSSSAKEAIEAAGGSVEVI

Annotated regions:
phrase: IVNLSTLNRFEDGTEVTPELLLETGVISKLNDGVKILASGAVEKKLTVKAHKFSSSAKEAIEAAGGSV
type: DOMAIN
name: Ribosomal_uL15/eL18
description: Large ribosomal subunit protein uL15/eL18

phrase: KILASGAVEKKLTVKAHKFSSSAKEAIEAA
type: CONSERVED_SITE
name: Ribosomal_uL15_CS
description: Large ribosomal subunit protein uL15, conserved site
Protein sequence:
MENLVKSCAGIEKKRSNLTPSMEDILTESKERSSTSGASYESSSTTTVASSSPPPPPSQILGWPIRKASFRKNSKESVNFDHKKLTLHDDSGFKAKEMNSADVEMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATIFGQLWRLEPLSSEKKEMWRREMEWILSVSDHIVELTPSTQTYPDGNKFEVMTCRPRFDLFINLPALRKLDNMLLDILASFKKTEFWYVDQGIVASENDGSASFRRKIQRQEEKWWLPVPRLAPNGLTEEARTELNHKRECATQILKAAMAINSLALTEMDVPKSYLETLPKNGRSCLGDVIYRYVTSDKFSAESLLDCLDLSSEHIALDIANRVEASIYVWRRRVQTKLGVNNNTSSTTPKLTWEMVKELMAAGDKRGLLVERSETLLRCLKQRFPSLTQTSLDISKIQWNKDIGKSILESYSRALESLASNIIARIDDLLYVDDLTKQSDDNNLLSSPAVSSIIAHKKVVPLPYLISASGTPYRTSFSTTPGFSPSMISPKKGERRTPYSSKDTNKIIEKGLPSRGYGVRRVLNNYLGMESKLKICVNPSDNADTAVINQISKDVEEEKKRNSTSVHQKGPPKYTVS

Annotated regions:
phrase: FKAKEMNSADVEMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATIFGQLWRLEPLSSEKKEMWRREMEWILSVSDHIVELTPSTQTYPDGNKFEVMTCRPRFDLFINLPALRKLDNMLLDILASFKKTEFWYVDQGIVASENDGSASFRRKIQRQEEKWWLPVPRLAPNGLTEEARTELNHKRECATQILKAAMAINSLALTEMDVPKSYLETLPKNGRSCLGDVIYRYVTSDKFSAESLLDCLDLSSEHIALDIANRVEASIYVWRRRVQTKLGVNNNTSSTTPKLTWEMVKELMAAGDKRGLLVERSETLLRCLKQRFPSLTQTSLDISKIQWNKDIGKSILESYSRALESLASNIIARIDDLLYVDDLTKQSDDN
type: DOMAIN
name: PRONE_dom
description: PRONE domain

phrase: DVEMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATIFGQLWRLEPLSSEKKEMWRREMEWILSVSDHIVELTPSTQTYPDGNKFEVMTCRPRFDLFINLPALRKLDNMLLDILASFKKTEFWYVDQGIVASENDGSASFRRKIQRQEEKWWLPVPRLAPNGLTEEARTELNHKRECATQILKAAMAINSLALTEMDVPKSYLETLPKNGRSCLGDVIYRYVTSDKFSAESLLDCLDLSSEHIALDIANRVEASIYVWRRRVQTKLGVNNNTSSTTPKLTWEMVKELMAAGDKRGLLVERSETLLRCLKQRFPSLTQTSLDISKIQWNKDIGKSILESYSRALESLASNIIARIDDLLYVDDLT
type: DOMAIN
name: PRONE_dom
description: PRONE domain
Protein sequence:
MNSLFASTARGLEELLKSELEALGAHDCKIVQGGVHFQGDDRLMYQSLLWSRLASRILLPLNEFKVYSDLDLYLGVQAIDWPSIFGVDKTFAVHFSGVNDEIRNSQYGALKVKDAIVDSFTRKMDQRPTVAKQQPDIRVNVFLQRDMASVALDLSGEGLHQRGYRDLTGQAPLKENLAAAIIQRSGWQPGTPMVDPMCGSGTLLIEAAMMASDRAPGLHRGHWGFTAWSAFNEALWRELTTEAQVRARRGLLETSSRFFGSDIDRRVIEMARANARRAGVAELITFNANDISKLVNPLPEGPVGTVISNPPYGERLESEPALIALHNMFGRMMKTAFGGWRLSLFSASPELLSCLQLRADREFKAKNGPLDCVQKNYQLTANPQGAGGALVAEDYANRLRKNVKKLDKWAKQQGIECYRLYDADLPDYNVAVDRYGSKVVVQEYAPPKTIDPQKARQRLFDVINATLAVLELPSNQLVLKTRERQKGKNQYEKLAQKGEFLLVSEYNAKLWVNLTDYLDTGLFLDHRIARQMLGKMSQGKDFLNLFAYTGTASVHAGLGGARSTTTVDMSRTYLEWAEKNLRVNGLTGQQHRLIQADCLSWLSNTDEQFDVIFIDPPTFSNSKRMETTFDVQRDHLVLMKELKRLLRRKGTIMFSNNKRGFQMDLAGIAALGLEAKEITALTQSEDFARNRQIHNCWLVTHSQEEK

Annotated regions:
phrase: RILLPLNEFKVYSDLDLYLGVQAIDWPSIFGVDKTFAVHFSGVNDEIRNSQYGALKVKDAIVDSFTRKMDQRPTVAKQQPDIRVNVFLQRDMASVALD
type: DOMAIN
name: THUMP_dom
description: THUMP domain

phrase: DLYLGVQAIDWPSIFGVDKTFAVHFSGVNDEIRNSQYGALKVKDAIVDSFTRKMDQRPTVAKQQPDIRVNVFLQRDMASVAL
type: DOMAIN
name: THUMP_dom
description: THUMP domain

phrase: ELPSNQLVLKTRERQKGKNQYEKLAQKGEFLLVSEYNAKLWVNLTDYLDTGLFLDHRIARQMLGKMSQGKDFLNLFAYTGTASVHAGLGGARSTTTVDMSRTYLEWAEKNLRVNGLTGQQHRLIQADCLSWLSNTDEQFDVIFIDPPTFSNSKRMETTFDVQRDHLVLMKELKRLLRRKGTIMFSNNKRGFQMD
type: DOMAIN
name: SAM-dep_methyl-trfase
description: S-adenosylmethionine-dependent methyltransferase

phrase: VISNPP
type: CONSERVED_SITE
name: DNA_methylase_N6_adenine_CS
description: DNA methylase, N-6 adenine-specific, conserved site

phrase: LFASTARGLEELLKSELEALGAHDCKIVQGGVHFQGDDRLMYQSLLWSRLASRI
type: DOMAIN
name: RlmL_1st
description: RlmL, ferredoxin-like domain

phrase: DPMCGSGTLLI
type: CONSERVED_SITE
name: RlmKL-like_Mtase_CS
description: Ribosomal RNA large subunit methyltransferase K/L-like, conserved site

phrase: LMYQSLLWSRLASRILLPLNEFKVYSDLDLYLGVQAIDWPSIFGVDKTFAVHFSGVNDEIRNSQYGALKVKDAIVDSFTRKMDQRPTVAKQQPDIRVNVFLQRDMASVALD
type: DOMAIN
name: THUMP_dom
description: THUMP domain

phrase: RGYRDLTGQAPLKENLAAAIIQRSGWQPGTPMVDPMCGSGTLLIEAAMMASDRAPGLHRGHWGFTAWSAFNEALWRELTTEAQVRARRGLLETSSRFFGSDIDRRVIEMARANARRAGVAELITFNANDISKLVNPLPEGPVGTVISNPPYGERLESEPALIALHNMFGRMMKTAFGGWRLSLFSASPELLSCLQLRADREFKAKNGPLDCVQ
type: DOMAIN
name: RlmKL-like_Mtase
description: Ribosomal RNA large subunit methyltransferase K/L-like, methyltransferase domain
Protein sequence:
MHNKTVRHLTILILTIAGIFIIDQNIKSLFVDGYRYYSDCIDLILVYNKGVAFSMFAFLDESLKYIQLVLVFGVFGYMLYLNQLCYAIPAGLMLGGAFSNIYDRFIHGGVVDMVYWHCGFDFAVFNFADVMIDVAVVWILLLNFKPKFCKNHS

Annotated regions: