nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MPDLTSVVQEIAEEMRERPDRGEVATYIPELARADPKAFGLVVIDADGQVAAAGDSDVPFSIQSISKVFTLTLALGMVGDRLWRRVGREPSGSPFNSIVQLEYERGIPRNPFINAGAIAVTDLILSRHQPREALGEILRFMQFLAQDSSIAIDEAVAASELRTGFRNAALANFMKAHGVIDNPVEYTLGVYFHHCAIAMTCRQLAEAGRFLAHSGRNPSTGHLVVQPERARRINAVMLTCGHYDGSGEFAFRVGLPGKSGVGGGILAVAPGRASIAVWSPGLDASGNSHLGRIALERLTKRLGWSIFGQ

Annotated regions:
Protein sequence:
MSVLSEFKAFAVKGNVVDLAVGVIIGGAFGKIVESLVGDVIMPIVSKIFGGLDFSNYFIPLAGQTATTLVEAKKAGAVLAYGSFITVAINFMILAFIIFMMIKQINRLQSAPAPAPAPAEPPPPAEDIVLLREIRDSLKR

Annotated regions:
phrase: KGNVVDLAVGVII
type: CONSERVED_SITE
name: Mechanosensitive_channel_CS
description: Large-conductance mechanosensitive channel, conserved site
Protein sequence:
MVSRRVQALLDQLRAQGIQDEQVLNALAAVPREKFVDEAFEQKAWDNIALPIGQGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPTALMTQLDEGGILVLPVGEEHQYLKRVRRRGGEFIIDTVEAVRFVPLVKGELA

Annotated regions:
Protein sequence:
MYYTRITQIERLTDEVATLYFSISLRSYPGQFVMVYVPGCEEIPLSLSSSNSVTVKAVGETTASLINAKEGQYVGVRGAFGSAFTPSKRALIVAGGIGIAPMKYLYEYLMKCGSKVSVVYGERTAKNLFWLDKFDRITVTTEDGSFGLKGTVLDALKLEKLDEYEKIYVCGSEGMLRATYDFLKERDALDKAEFSLERYMRCGIGVCGSCVIENGLRVCADGPVFNASELPW

Annotated regions:
phrase: ERYMRCGIGVCGSCVIENGLRVCADGPVFNASE
type: DOMAIN
name: Dihydroorotate_DH_Fe-S-bd
description: Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain

phrase: VAGGIGIAPMKYLYEYLMKCGSKVSVVYGERTAKNLFWLDKFDRITVTTEDGSFGLKGTVLDALKLEKLDEYEKIYVCGSEGMLRA
type: DOMAIN
name: OxRdtase_FAD/NAD-bd
description: Oxidoreductase FAD/NAD(P)-binding

phrase: MYYTRITQIERLTDEVATLYFSISLRSYPGQFVMVYVPGCEEIPLSLSSSNSVTVKAVGETTASLINAKEGQYVGVRGAFGSAFT
type: DOMAIN
name: FAD-bd_FR_type
description: FAD-binding domain, ferredoxin reductase-type
Protein sequence:
MNATSPLRPILDLTRDELIAWVEEGGERPYRADQIRKWIFGKRVTEFDEMHDVSKVVRERLKAEFRLFSSEVVKHQVAKDRTEKLLLRLQDGNHVETVLMREPNRRTVCISSQVGCAMGCVFCASGLLGVKRNLTTAEILEQVLRVDRLLGPDERLTNVVVMGIGEPLANMRHLLPALDTLNDKGGMGLGYRRITISTVGLPEKIREFASHDKPYSLAVSLHAPNDELRTRLVPVNKNIGIDAILQAADDYFAQTGRRITYEYVLLRGQNDSPEHAAELGRLLAHRAAHVNLIPMNSITDLPYAEPGEPQTRAFFDVLARYGVVTTVRKRKGADIDAACGQLRLERERGEAALVEIAAPTVADVPA

Annotated regions:
phrase: EPNRRTVCISSQVGCAMGCVFCASGLLGVKRNLTTAEILEQVLRVDRLLGPDERLTNVVVMGIGEPLANMRHLLPALDTLNDKGGMGLGYRRITISTVGLPEKIREFASHDKPYSLAVSLHAPNDELRTRLVPVNKNIGIDAILQAADDYFAQTGRRITYEYVLLRGQNDSPEHAAELGRLLAHRAAHVNLIPMNSITDLPYAEPGEPQTRAFFDVLARYGVVTTVRKRKGA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: ILDLTRDELIAWVEEGGERPYRADQIRKWIFGKRVTEFDEMHDVSKVVRERLKAE
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: PLRPILDLTRDELIAWVEEGGERPYRADQIRKWIFGKRVTEFDEMHDVSKVVRERLKAEFRLFSSEVVKHQVAKDRTEKLLLRLQDGNHVETVLMREPNRRTVCISSQVGCAMGCVFCASGLLGVKRNLTTAEILEQVLRVDRLLGPDERLTNVVVMGIGEPLANMRHLLPALDTLNDKGGMGLGYRRITISTVGLPEKIREFASHDKPYSLAVSLHAPNDELRTRLVPVNKNIGIDAILQAADDYFAQTGRRITYEYVLLRGQNDSPEHAAELGRLLAHRAAHVNLIPMNSITDLPYAEPGEPQTRAFFDVLARYGVVTTVRKRKGADIDAACGQLRLERERG
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SSQVGCAMGCVFCASGLLGVKRNLTTAEILEQVLRVDRLLGPDERLTNVVVMGIGEPLANMRHLLPALDTLNDKGGMGLGYRRITISTVGLPEKIREFASHDKPYSLAVSLHAPNDELRTRLVPVNKNIGIDAILQAADDYFAQTGRRITYEYVLLRGQNDSPEHAA
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MSTNNSDIRVVVGMSGGVDSSVTAHILKEQGYDVIGIFMKNWDDTDEFGVCTATEDYDDVIRVANQIGIPYYAVNFEKEYWDKVFTYFLDEYKLGRTPNPDVMCNKEIKFKAFLEHAESLGADYVATGHYAQVKKVGDEIELLRGVDNNKDQTYFLNQLSQDQLKKVMFPLGGMEKTEVREIAKKAGLATANKKDSTGICFIGERNFKQFLSEYLPAQPGEMRTLNGEVLGKHDGLMYYTIGQRHGLGIGGDGEPWFVVGKDLKENVLFVEQGFHHETLYSDSLIATDISFTTNAEKPKTIECTAKFRYRQTDTKVTVHLREDGTAEVVFADPVRAITPGQAVVFYDGDICLGGGTIDTVWKNGAKLDYVG

Annotated regions:
phrase: KQFLSEYLPAQPGEMRTLNGEVLGKHDGLMYYTIGQRHGLGIGGDGEPWFVVGKDLKENVLF
type: DOMAIN
name: MnmA-like_central
description: tRNA-specific 2-thiouridylase MnmA-like, central domain

phrase: SDSLIATDISFTTNAEKPKTIECTAKFRYRQTDTKVTVHLREDGTAEVVFADPVRAITPGQAVVFYDGDICLGGGT
type: DOMAIN
name: MnmA-like_C
description: tRNA-specific 2-thiouridylase MnmA-like, C-terminal domain
Protein sequence:
MMYHIPGVLSPQDVARFREQLEQAEWVDGRVTTGAQGAQVKNNQQVDTRSTLYAALQNEVLNAVNQHALFFAAALPRTLSTPLFNRYQNNETYGFHVDGAVRSHPQNGWMRTDLSATLFLSDPQSYDGGELVVNDTFGQHRVKLPAGDLVLYPSSSLHCVTPVTRGVRVASFIWIQSMIRDDKKRAMLFELDKNIQNIQSLKSRYGENEEILSLLNLYHNLLREWSEI

Annotated regions:
phrase: TLSTPLFNRYQNNETYGFHVDGAVRSHPQNGWMRTDLSATLFLSDPQSYDGGELVVNDTFGQHRVKLPAGDLVLYPSSSLHCVTPVTRGVRVASFIWIQ
type: DOMAIN
name: Oxoglu/Fe-dep_dioxygenase_dom
description: Oxoglutarate/iron-dependent dioxygenase domain

phrase: FNRYQNNETYGFHVDGAVRSHPQNGWMRTDLSATLFLSDPQSYDGGELVVNDTFGQHRVKLPAGDLVLYPSSSLHCVTPVTRGVRVASFIW
type: DOMAIN
name: Pro_4_hyd_alph_FE2OG_OXY
description: Prolyl 4-hydroxylase alpha subunit, Fe(2+) 2OG dioxygenase domain

phrase: MMYHIPGVLSPQDVARFREQLEQAEWVDGRVTTGAQGAQVKNNQQVDTRSTLYAALQNEVLNAVNQHALFFAAALPRTLSTPLFNRYQNNETYGFHVDGAVRSHPQNGWMRTDLSATLFLSDPQSYDGGELVVNDTFGQHRVKLPAGDLVLYPSSSLHCVTPVTRGVRVASFIWI
type: DOMAIN
name: Pro_4_hyd_alph
description: Prolyl 4-hydroxylase, alpha subunit

phrase: DKKRAMLFELDKNIQNIQSLKSRYGENEEILSLLNLYHNLLREWS
type: DOMAIN
name: PKHD_C
description: PKHD-type hydroxylase C-terminal domain
Protein sequence:
MSCRVCLEDRSIKPLPCCKKPVCDECLKRYLSSQVQLGQAEIQCPITECNKHLDESTILYSLPHDDIIKYKYFLELSRMDSSTKPCPQCKHFTTFKRKTHIPNPTKSENKLKIQCPSCQFIWCFRCHAPWHEGVNCREYKKGDKLLRHWANEIEHGQRNAQKCPRCKVHIQRTEGCDHMTCSQCNTNFCYRCGERYRQLRFFGDHTSNLSIFGCKYRYLPERPHVRRLVRGSVCAGKLLIAPLLIVLGLVLGALAVVIGLFGLPIYCLCKKQRKRTRTGMPW

Annotated regions:
phrase: RMDSSTKPCPQCKHFTTFKRKTHIPNPTKSENKLKIQCPSCQFIWCFRCHAPWHEGVNCREYKKGDKLLRHWAN
type: DOMAIN
name: BRcat_RBR_RNF217
description: E3 ubiquitin-protein ligase RNF217, BRcat domain

phrase: LELSRMDSSTKPCPQCKHFTTFKRKTHIPNPTKSENKLKIQCPSCQFIWCFRCHAPWHEGVN
type: DOMAIN
name: IBR_dom
description: IBR domain

phrase: DKLLRHWANEIEHGQRNAQKCPRCKVHIQRTEGCDHMTCSQCNTNFCYRCGERYRQLRFFGDHTSNLSIFG
type: DOMAIN
name: IBR_dom
description: IBR domain

phrase: IKYKYFLELSRMDSSTKPCPQCKHFTTFKRKTHIPNPTKSENKLKIQCPSCQFIWCFRCHAPWHEGVN
type: DOMAIN
name: IBR_dom
description: IBR domain

phrase: GQRNAQKCPRCKVHIQRTEGCDHMTCSQCNTNFCYRCGERYRQLRFFGDHTSNLSIFGCKYRYLPER
type: DOMAIN
name: Rcat_RBR_RNF217
description: E3 ubiquitin-protein ligase RNF217, Rcat domain

phrase: MSCRVCLEDRSIKPLPCCKKPVCDECLKRYLSSQVQLGQAEIQCPITE
type: DOMAIN
name: RNF217_RBR_vRING-HC
description: E3 ubiquitin-protein ligase RNF217, variant RING finger, HC subclass

phrase: MSCRVCLEDRSIKPLPCCKKPVCDECLKRYLSSQVQLGQAEIQCPITECNKHLDESTILYSLPHDDIIKYKYFLELSRMDSSTKPCPQCKHFTTFKRKTHIPNPTKSENKLKIQCPSCQFIWCFRCHAPWHEGVNCREYKKGDKLLRHWANEIEHGQRNAQKCPRCKVHIQRTEGCDHMTCSQCNTNFCYRCGERYRQLRFFGDHTSNLSIFGCKYR
type: DOMAIN
name: TRIAD_supradom
description: TRIAD supradomain
Protein sequence:
MMDLGLLMLQDMEKERETLQVWKKRVEQELDRVIAFWMEHSHDQEHGGFFTCLGRDGKVYDHLKYVWLQGRQVWMYCRLYRSFERFRRVELLDAARAGGEFLLRYARVAPPGKKCAFVLTRDGRPVKVQRTIFSECFYTMAMNELWKVTGEVRYQSEAIEMMDQIIHWVREDPAGLGRPQLSGALATEPMAVPMMLLSLVEQLGEEDEELTNMYAELGDWCVHRILQHVQRDGQVVLENVSEDGKELPGCLGRHQNPGHTLEAGWFLLQYALRKGDPKLRMHIIDKFLLLPFHSGWDPEHGGLFYFQDADGLCPTQLEWNMKLWWPHSEAMIAFLMGYSDSGDPALLHLFYKVAEYTFRQFRDPEYGEWFGYLNQEGKVALTIKGGPFKGCFHVPRCLAMCEQILGALLQRLEPAPLDSSPAVSTHEGSK

Annotated regions:
phrase: ERETLQVWKKRVEQELDRVIAFWMEHSHDQEHGGFFTCLGRDGKVYDHLKYVWLQGRQVWMYCRLYRSFERFRRVELLDAARAGGEFLLRYARVAPPGKKCAFVLTRDGRPVKVQRTIFSECFYTMAMNELWKVTGEVRYQSEAIEMMDQIIHWVREDPAGLGRPQLSGALATEPMAVPMMLLSLVEQLGEEDEELTNMYAELGDWCVHRILQHVQRDGQVVLENVSEDGKELPGCLGRHQNPGHTLEAGWFLLQYALRKGDPKLRMHIIDKFLLLPFHSGWDPEHGGLFYFQDADGLCPTQLEWNMKLWWPHSEAMIAFLMGYSDSGDPALLHLFYKVAEYTFRQFRDPEYGEWFGYLNQEGKVALTIKGGPFKGCFHVPRCLAMCEQILGA
type: DOMAIN
name: AGE_dom
description: AGE domain
Protein sequence:
MKTARRRSRELAVQAVYQSLINRTAAPEIAKNIREMSDFAKADEELFNKLFFGTQTNAADYIQKIRPLLDRDEKDLNPIERAVLLTACHELSAMPETPYPVIINEAIEVTKTFGGTDGHKFVNGILDKLAAQIRPDEPKRR

Annotated regions:
phrase: RSRELAVQAVYQSLINRTAAPEIAKNIREMSDFAKADEELFNKLFFGTQTNAADYIQKIRPLLDRDEKDLNPIERAVLLTACHELSAMPETPYPVIINEAIEVTKTFGGTDGHKFVNGILDKL
type: DOMAIN
name: NusB_RsmB_TIM44
description: NusB/RsmB/TIM44
Protein sequence:
MDSSALGLTCLAAAIGMAIAAAGCGIGQGMGLKAACEGTARNPEAGGKIMVTLILGLAFVESLAIYALVVNLILLFANPFMG

Annotated regions:
phrase: ARNPEAGGKIMVTLILGLAFV
type: BINDING_SITE
name: ATP_synth_F0_csu_DDCD_BS
description: ATP synthase, F0 complex, subunit C, DCCD-binding site

phrase: LAAAIGMAIAAAGCGIGQGMGLKAACEGTARNPEAGGKIMVTLILGLAFVESLAIYALVVNLI
type: DOMAIN
name: ATPase_proteolipid_c-like_dom
description: V-ATPase proteolipid subunit C-like domain
Protein sequence:
MSQALKHFLNLTDAGGDAIAAMLNDALDRKSARAGQPKGKADADAPLGGRVLAMVFEKNSTRTRVSFDIAMRQLGGSALILDAGTTQLGRGETIADTARVLSRMADAIMLRTDDHAKVEELARHATVPVINGLTDLSHPCQIMADLLTVIEHGKALPGLEVAWLGDGNNVLNSIVEAAGLMKFNVRIGVPEGYESDAGMIEAAVLAGAGIRVIRDPVEAVRGADVVVTDTWISMGQAHAEAKLAAMAPYQVNDALMAHAKPDAVFLHCLPAHRGEEVTDAVIDGPRSVVWDEAENRIHAQKSVLRWVFGQI

Annotated regions:
phrase: GLEVAWLGDGNNVLNSIVEAAGLMKFNVRIGVPEGYESDAGMIEAAVLAGAGIRVIRDPVEAVRGADVVVTDTWISMGQAHAEAKLAAMAPYQVNDALMAHAKPDAVFLHCLPAHRGEEVTDAVIDGPRSVVWDEAENRIHAQKSVLR
type: DOMAIN
name: Asp_carbamoyltransf_Asp/Orn-bd
description: Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain

phrase: KHFLNLTDAGGDAIAAMLNDALDRKSARAGQPKGKADADAPLGGRVLAMVFEKNSTRTRVSFDIAMRQLGGSALILDAGTTQLGRGETIADTARVLSRMADAIMLRTDDHAKVEELARHATVPVINGLTDLSHPCQIMADLLTVI
type: DOMAIN
name: Asp/Orn_carbamoyltranf_P-bd
description: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding
Protein sequence:
MAKLEKLLENLIEFEVLESHFPTEVKGITYDSRQVKPGYIFVCIQGFQKDGHDFIEDAIGNGARVIVIEKDVPRKPGITYIKVKDSRDALSRLSEAYYDFASRKLNLIGVTGTNGKTTTTYMIESILRKANIKTGLIGTIRNKICDEVFPAKRTTPESSDLQELFARMVKAGVTHTVMEVSSHALELKRVQNFNFKVGVFTNITQDHLDFHTTLENYRQAKSKLFQALTLDGVGVINIDDPSGEYMIERCKGRVLTYGINNKHAEIRGSEIKVNVNGVSYHVTTPVGEIRLKLKLTGYFNVYNSLAAIGSGLALNIPLEIIKEGLESLTGVTGRFEQVDCGQNFGVIVDYAHTPDGMENILKTAQQIARGRKIIVFGCGGDRDRGKRPIMGKIAAKYCDLCILTSDNPRTEDPMQILRDIEKGLLELDQPVNYRIIEDRREAIFYAVREARENDLVIIMGKGHETYQIFKDYTIPFDDREVAKEAIMSL

Annotated regions:
phrase: VTGTNGKTTTTYMIESILRKANIKTGLIGTIRNKICDEVFPAKRTTPESSDLQELFARMVKAGVTHTVMEVSSHALELKRVQNFNFKVGVFTNITQDHLDFHTTLENYRQAKSKLFQALTLDGVGVINIDDPSGEYMIERCKGRVLTYGINNKHAEIRGSEIKVNVNGVSYHVTTPVGEIRLKLKLTGYFNVYNSLAAI
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRFEQVDCGQNFGVIVDYAHTPDGMENILKTAQQIARGRKIIVFGCGGDRDRGKRPIMGKIAAKYCDLCILTSDNPRTEDPMQILRDIEKGLLELDQPVNYRIIEDRREAIFYAVREARENDLVIIMGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: EVKGITYDSRQVKPGYIFVCIQGFQKDGHDFIEDAIGNGARVIVIEKDVPRKPGITYIKVKDSRDALSRLSEAY
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain
Protein sequence:
MKKKLVVLGLLAVVLVLVIVGLCLWLPSASKEPDNHVYTRAAVAADAKQCSKIGRDALRDGGSAVDAAIAALLCVGLMNAHSMGIGGGLFLTIYNSTTRKAEVINAREVAPRLAFATMFNSSEQSQKGGLSVAVPGEIRGYELAHQRHGRLPWARLFQPSIQLARQGFPVGKGLAAALENKRTVIEQQPVLCEVFCRDRKVLREGERLTLPQLADTYETLAIEGAQAFYNGSLTAQIVKDIQAAGGIVTAEDLNNYRAELIEHPLNISLGDVVLYMPSAPLSGPVLALILNILKGYNFSRESVESPEQKGLTYHRIVEAFRFAYAKRTLLGDPKFVDVTEVVRNMTSEFFAAQLRAQISDDTTHPISYYKPEFYTPDDGGTAHLSVVAEDGSAVSATSTINLYFGSKVRSPVSGILFNNEMDDFSSPSITNEFGVPPSPANFIQPGKQPLSSMCPTIMVGQDGQVRMVVGAAGGTQITTATALAIIYNLWFGYDVKRAVEEPRLHNQLLPNVTTVERNIDQAVTAALETRHHHTQIASTFIAVVQAIVRTAGGWAAASDSRKGGEPAGY

Annotated regions:
phrase: TAHLSVVAEDGSAVSATSTINLYF
type: CONSERVED_SITE
name: GGT_CS
description: Gamma-glutamyltranspeptidase, conserved site
Protein sequence:
MARISGIDLPSNKQLKIALTSIYGIGRTRALEVCNKADISSSKIAKDLDNDEVNRLRKVIESDYVVEGKLRSEVAMSIKRLMDIACYRGVRHRKGLPLRGQRTKTNARTRKGKRKTVANKKIASK

Annotated regions:
phrase: RGVRHRKGLPLRG
type: CONSERVED_SITE
name: Ribosomal_uS13_CS
description: Small ribosomal subunit protein uS13, conserved site
Protein sequence:
MGQIFSRSASPIPRPPRGLAAHHWLNFLQAAYRLEPGPSSYDFHQLKKFLKIALETPARICPINYSLLASLLPKGYPGRVNEILHILIQTQAQIPSRPAPPPPSSPTHDPPDSDPQIPPPYVEPTAPQVLPVMHPHGAPPNHRPWQMKDLQAIKQEVSQAAPGSPQFMQTIRLAVQQFDPTAKDLQDLLQYLCSSLVASLHHQQLDSLISEAETRGITGYNPLAGPLRVQANNPQQQGLRREYQQLWLAAFAALPGSAKDPSWASILQGLEEPYHAFVERLNIALDNGLPEGTPKDPILRSLAYSNANKECQKLLQARGHTNSPLGDMLRACQTWTPKDKTKVLVVQPKKPPPNQPCFRCGKAGHWSRDCTQPRPPPGPCPLCQDPTHWKRDCPRLKPTIPEPEPEEDALLLDLPADIPHPKNLHRGGGLTSPPTLQQVLPNQDPASILPVIPLDPARRPVIKAQVDTQTSHPKTIEALLDTGADMTVLPIALFSSNTPLKNTSVLGAGGQTQDHFKLTSLPVLIRLPFRTTPIVLTSCLVDTKNNWAIIGRDALQQCQGVLYLPEAKRPPVILPIQAPAVLGLEHLPRPPEISQFPLNQNASRPCNTWSGRPWRQAISNPTPGQGITQYSQLKRPMEPGDSSTTCGPLTL

Annotated regions:
phrase: RRPVIKAQVDTQTSHPKTIEALLDTGADMTVLPIALFSSNTPLKNTSVLGAGGQTQDHFKLTSLPVLIRLPFRTTPIVLTSCLVDTKNNWAIIGRDALQQCQGV
type: DOMAIN
name: Retropepsins
description: Retropepsins

phrase: PCPLCQDPTHWKRDCP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: PCFRCGKAGHWSRDCT
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: CFRCGKAGHWSRDCT
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: IEALLDTGADMTVLPIALFSSNTPLKNTSVLGAGGQTQDHFKLTSLPVLIRLPFRTTPIVLTSCLVDTKNNWAIIGRD
type: DOMAIN
name: Peptidase_A2_cat
description: Peptidase A2A, retrovirus, catalytic

phrase: ALLDTGADMTV
type: ACTIVE_SITE
name: Aspartic_peptidase_AS
description: Aspartic peptidase, active site

phrase: ITGYNPLAGPLRVQANNPQQQGLRREYQQLWLAAFAALPGSAKDPSWASILQGLEEPYHAFVERLNIALDNGLPEGTPKDPILRSLAYSNANKECQKLLQARGHTNSPLGDMLRACQTWTPKDKTKVLVVQPKKPPPNQPCFRCGKAGHWSRDCTQPRPPPGPCPLCQDPTHWKRDCPRLKP
type: DOMAIN
name: Primate_lentivir_Gag_pol-like
description: Primate lentivirus group Gag polyprotein-like

phrase: MGQIFSRSASPIPRPPRGLAAHHWLNFLQAAYRLEPGPSSYDFHQLKKFLKIALETPARICPINYSLLASLLPKGYPGRVNEILHILIQTQ
type: DOMAIN
name: D_retro_matrix
description: Delta-retroviral matrix protein

phrase: AKDPSWASILQGLEEPYHAFVERLNIALDNGLPEGTPKDPILRSLAYSNANKECQKLLQARGHTNSPLGDMLR
type: DOMAIN
name: Gag_p24_C
description: Retroviral nucleocapsid Gag protein p24, C-terminal domain

phrase: PCFRCGKAGHWSRDCT
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type
Protein sequence:
MTDHTHDQHTTTANGTAADSATEGAAHVRALAVVVLAAGQGTRMKSSMPKLLHPLAGVPILGHVLATARALSAEHVVTVVRHERDRIAAVVQEELPESVVVDQDDTPGTGRAVEQAVSALPDDFAGDVLVVNGDVPLLDSETLGQLLARHRAGTAAATILSAVLDDATGYGRVVRAADGSVSAIVEQKDAGESELAITEINAGVYVFSVAGLREQLASLTTENAQGEKYVTDLVGLLRGAGHEVHAVPVSQPWAVEGVNDRAQLARQAARLNALIIRKWQLAGVTVQDPSTTWIDMGVTLAQDVTIKPGTQLLGATVVETGATIGPDTTLVDCEIGEDAEVRRTDGTLAVVGAGATVGPFAYLRPGTLLGAAGKIGTFVETKNAEIGARSKVPHLSYVGDATIGEGANIGAGTIFANYDGVNKHSTVVGDEVRTGSHNVFVAPVRIGDGAYTGAGTVVRKDVPSGSLAISVAPQRNLEGWTVANRPGSAAATAAEASEPIDPTD

Annotated regions:
phrase: VVVLAAGQGTRMKSSMPKLLHPLAGVPILGHVLATARALSAEHVVTVVRHERDRIAAVVQEELPESVVVDQDDTPGTGRAVEQAVSALPDDFAGDVLVVNGDVPLLDSETLGQLLARHRAGTAAATIL
type: DOMAIN
name: MobA-like_NTP_Trfase
description: MobA-like NTP transferase

phrase: GVTVQDPSTTWIDMGVTLAQDVTIKPGTQLLGATVVETGATIGPDTTLVDCEIGEDAEVRRTDGTLAVVGAGATVGPFAYLRPGTLLGAAGKIGTFVETKNAEIGARSKVPHLSYVGDATIGEGANIGAGTIFANYDGVNKHSTVVGDEVRTGSHNVFVAPVRIGDGAYTGAGTVVRKDVPSGSLAISVAP
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain
Protein sequence:
MKLLSLHVQDFRNLAAVELAPSPRATVLLGENGQGKTNLLEAIYFLTTLKPLRAVRLAELVRFGAADAAVAGDFEGPGGVRRVAVQVAAGGRTASLDGKALGSGARLDDYFEGLASVCFSPDDLLLVKAGPDGRRRFLDRAAFNRWPAVLGEAREYVRALRARNAALRSGTAEVEASFREPLVRAGARLLVRRRDLVAELAPRLRAAFAEISGPAAPEADLAYRAAGGVEVGHPEAEVAARLARALETRLERDREKGFTSAGPHMDDLVLALGGKGARLYGSQGQQRALVLALKIAEIENLRAALGRPPLLLLDDVSSELDPAKNRFLLGYLAALPAQAFLTTTDRRLIEPAAGPDTAFYEVRSGVVSPLVS

Annotated regions:
phrase: LLLLDDVSSELDPAKNRF
type: CONSERVED_SITE
name: DNA-binding_RecF_CS
description: DNA-binding, RecF, conserved site

phrase: LSLHVQDFRNLAAVELAPSPRATVLLGENGQGKTNLLEAIYFLTTLKPLRAVRLAELVRFGAADAAVAGDFEGPGGVRRVAVQVAAGGRTASLDGKALGSGARLDDYFEGLASVCFSPDDLLLVKAGPDGRRRFLDRAAFNRWPAVLGEAREYVRALRARNAALRSGTAEVEASFREPLVRAGARLLVRRRDLVAELAPRLRAAFAEISGPAAPEADLAYRAAGGVEVGHPEAEVAARLARALETRLERDREKGFTSAGPHMDDLVLALGGKGARLYGSQGQQRALVLALKIAEIENLRAALGRPPLLLLDDVSSELDPAKNRFLLGYLAALPAQAFLTTTDRRLIEP
type: DOMAIN
name: RecF/RecN/SMC_N
description: RecF/RecN/SMC, N-terminal
Protein sequence:
MNYENLLIEVGTEELPPKALRKLAESFVSNFTDELEKAELSFESAQWHAAPRRLAFTVNQLVLAQADKVVEKRGPAIAQAFDADGNPTKAAMGWARGNGISVEQAERLKTDKGEWLLHQAKVVGVETKSLINDMAQRALDKLPIPKPMRWGTSKTQFIRPVHTVTMLLGSELVEGELLGVKSARVIRGHRFMGKKSFELDHADNYLSALKEQGMVLADYEARKAIIKTDAEAAAAKIGGVADLEDDLLEEVTSLVEWPVVLTANFEEKFLDVPAEALVYTMKGDQKYFPVFDKAGQLLPHFIFVTNIESKDPQVIISGNEKVVRPRLADAEFFFETDKKQTLESRLASLETVVFQKQLGTIKQRVERISQLAGYIAASIDADSDEASRAGLLSKSDLMTNMVMEFTDLQGTMGMHYARLNGETEAVAVALAEQYKPKFSGDTVPTAPISVCVALAEKLDTLVGIFGIGQAPKGAADPFALRRAAIGVLRICLENNLPLDLVDLIAKAQELHGDNLTNDKAAEQVLEFFMGRFRAWYQDQGVSVDVILAVLARRPTAPADFDSRIKAVAHFRSLEQASALAAANKRVSNILAKVEGELATDISSELLVENAEKALAEKLNELQPQLAPLFAAANYQQALSLLADLRESVDTFFEDVMVMADDEALKNNRLALLSSLREQFLHAADISLLQ

Annotated regions:
phrase: RVSNILAKVEGELATDISSELLVENAEKALAEKLNELQPQLAPLFAAANYQQALSLLADLRESVDTFFEDVMVMADDEALKNNRLALLSSLREQFLHAAD
type: DOMAIN
name: DALR_anticod-bd
description: DALR anticodon binding

phrase: AANKRVSNILAKVEGELATDISSELLVENAEKALAEKLNELQPQLAPLFAAANYQQALSLLADLRESVDTFFEDVMVMADDEALKNNRLALLSSLREQ
type: DOMAIN
name: DALR_anticod-bd
description: DALR anticodon binding
Protein sequence:
MVIERTLSIIKPDAVAKNIIGEIYTRFENAGLRIVAARMLHLSKEQAQEFYTVHKDRPFYNDLVGFMTSGPVMVQVLEGENAIARNREIMGATNPKEAVPGTIRADFAENIDANAVHGSDGSGTAEQEINFFFKSEDICPRIG

Annotated regions:
phrase: ERTLSIIKPDAVAKNIIGEIYTRFENAGLRIVAARMLHLSKEQAQEFYTVHKDRPFYNDLVGFMTSGPVMVQVLEGENAIARNREIMGATNPKEAVPGTIRADFAENIDANAVHGSDGSGTAEQEINFFFKSED
type: DOMAIN
name: NDK-like_dom
description: Nucleoside diphosphate kinase-like domain

phrase: IERTLSIIKPDAVAKNIIGEIYTRFENAGLRIVAARMLHLSKEQAQEFYTVHKDRPFYNDLVGFMTSGPVMVQVLEGENAIARNREIMGATNPKEAVPGTIRADFAENIDANAVHGSDGSGTAEQEINFFFKSEDIC
type: DOMAIN
name: NDK-like_dom
description: Nucleoside diphosphate kinase-like domain
Protein sequence:
MSPQTETKASVGFKAGVKEYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVPGETDQYICYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYIKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYLNATAGTSEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGIHFRVLAKALRMSGGDHIHSGTVVGKLEGERDITLGFVDLLRDDFIEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVKARNEGRDLASEGNVIIREAAKWSPELSAACEVWKEIRFDFKAVDTLDPEK

Annotated regions:
phrase: GLDFTKDD
type: ACTIVE_SITE
name: RuBisCo_large_chain_AS
description: Ribulose bisphosphate carboxylase, large chain, active site

phrase: YYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVPGETDQYICYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPA
type: DOMAIN
name: RuBisCO_lsu_fd_N
description: Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal

phrase: GIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIYKSQAETGEIKGHYLNATAGTSEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGIHFRVLAKALRMSGGDHIHSGTVVGKLEGERDITLGFVDLLRDDFIEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVKARNEGRDLASEGNVIIREAAKWSPELSAACEV
type: DOMAIN
name: RuBisCO_lsu_C
description: Ribulose bisphosphate carboxylase, large subunit, C-terminal
Protein sequence:
MTIETLSTQSKAQVLAEALRWLKQLHGRVVVIKYGGNAMTDDTLRQAFAADMAFLRNCGIHPVVVHGGGPQITAMLGKLGIEGDFKGGFRVTTPEVLDVARMVLFGQVGRELVNLINAHGPYAVGVTGEDAQLFTAVRRSVNVDGVATDIGLVGDVDHVNAAALMDLIAAHRIPVISTLAPDAEGVVHNINADTAAAAVAEALGAEKLLMLTDVEGLYTSWPDRDSLVREIDTAALEQLLPRLEAGMIPKVEGCLRAVTGGVPSAHVIDGRVEHCVLVELFTNAGTGTKVVSA

Annotated regions:
phrase: VVVIKYGGNAMTDDTLRQAFAADMAFLRNCGIHPVVVHGGGPQITAMLGKLGIEGDFKGGFRVTTPEVLDVARMVLFGQVGRELVNLINAHGPYAVGVTGEDAQLFTAVRRSVNVDGVATDIGLVGDVDHVNAAALMDLIAAHRIPVISTLAPDAEGVVHNINADTAAAAVAEALGAEKLLMLTDVEGLYTSWPDRDSLVREIDTAALEQLLPRLEAGMIPKVEGCLRAVTGGVPSAHVI
type: DOMAIN
name: Asp/Glu/Uridylate_kinase
description: Aspartate/glutamate/uridylate kinase
Protein sequence:
MCYSKINNSLRKRFRTFYPVVIDIETAGFNPETDAILEIAIITLKMNEFGLLEKEHLLHFHIQPFKGSRIDKKAIEFHGIDPFSPLRRAISEYEALYSIFNLIHKGIKSNNCTKSIIVAHNAIFDYNFLTAAITRTKIKNNPFHSFVIFDTATLSGLAVGQTVLARACKAIGLTFDNNQAHSALYDTQQTANLFCKIVNRWKTLGGWPPNDTRTIKL

Annotated regions:
phrase: VVIDIETAGFNPETDAILEIAIITLKMNEFGLLEKEHLLHFHIQPFKGSRIDKKAIEFHGIDPFSPLRRAISEYEALYSIFNLIHKGIKSNNCTKSIIVAHNAIFDYNFLTAAITRTKIKNNPFHSFVIFDTATLSGLAVGQTVLARACKAIGLTFDNNQAHSALYDTQQTANL
type: DOMAIN
name: Exonuclease_RNaseT/DNA_pol3
description: Exonuclease, RNase T/DNA polymerase III

phrase: YPVVIDIETAGFNPETDAILEIAIITLKMNEFGLLEKEHLLHFHIQPFKGSRIDKKAIEFHGIDPFSPLRRAISEYEALYSIFNLIHKGIKSNNCTKSIIVAHNAIFDYNFLTAAITRTKIKNNPFHSFVIFDTATLSGLAVGQTVLARACKAIGLTFDNNQAHSALYDTQQTANLFCKIVNRWK
type: DOMAIN
name: Exonuclease_RNaseT/DNA_pol3
description: Exonuclease, RNase T/DNA polymerase III
Protein sequence:
MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLAPYYTVKEFVESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIAAVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLSNEELAQTFTEWNNGELSSYLIDITKDIFTKKDEDGNYLVDVILDEAANKGTGKWTSQSALDLGEPLSLITESVFARYISSLKDQRVAASKVLSGPQAQSAGDKAEFIEKVRSALYLGKIVSYAQGFSQLRAASEEYNWDLNYGEIAKIFRAGCIIRAQFLQKITDAYAENPQIANLLLAPYFKQIADDYQQALRDVVAYAVQNGIPVPTFAAAVAYYDSYRAAVLPANLIQAQRDYFGAHTYKRIDKEGVFHTEWLD

Annotated regions:
phrase: GHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLSNEELAQTFTEWNNGELSSYLIDITKDIFTKKDEDGNYLVDVILDEAANKGTGKWTSQSALDLGEPLSLITESVFARYISSLKDQRVAASKVLSGPQAQSAGDKAEFIEKVRSALYLGKIVSYAQGFSQLRAASEEYNWDLNYGEIAKIFRAGCIIRAQFLQKITDAYAENPQIANLLLAPYFKQIADDYQQALRDVVAYAVQNGIPVPTFAAAVAYYDSYRAAVLPANLIQAQRDYFGAHTYKRIDKEGVFHTE
type: DOMAIN
name: 6PGDH_C
description: 6-phosphogluconate dehydrogenase, C-terminal

phrase: ILDEAANKGTGK
type: BINDING_SITE
name: 6PGdom_BS
description: 6-phosphogluconate-binding site

phrase: GHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLSNEELAQTFTEWNNGELSSYLIDITKDIFTKKDEDGNYLVDVILDEAANKGTGKWTSQSALDLGEPLSLITESVFARYISSLKDQRVAASKVLSGPQAQSAGDKAEFIEKVRSALYLGKIVSYAQGFSQLRAASEEYNWDLNYGEIAKIFRAGCIIRAQFLQKITDAYAENPQIANLLLAPYFKQIADDYQQALRDVVAYAVQNGIPVPTFAAAVAYYDSYRAAVLPANLIQAQRDYFGAHTYKRIDKEGVFHTEW
type: DOMAIN
name: 6PGDH_C
description: 6-phosphogluconate dehydrogenase, C-terminal

phrase: QIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIAENPGKKLAPYYTVKEFVESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIAAVAEDGEPCVTYI
type: DOMAIN
name: 6PGDH_NADP-bd
description: 6-phosphogluconate dehydrogenase, NADP-binding