nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MALPSSSLSSQIHTGATTQCIPHFHGSLNAGTSAGKRRSLYLRWGKDNQAKKFGPSKIVACAGQDPFSVPTLVKREFPPGFWKDHVIESLMPSYKVAPSDEKRIETLITEIKNMFRSMGYGETNPSAYDTAWVARIPAVDGSEKPQFPETLEWILQNQLKDGSWGEEFYFLAYDRILATLACIITLTIWQTGDTQVQKGIEFFKTQAGKIEEEADSHRPSGFEIVFPAMLKEAKALGLDLPYELPFIQQIIEKREAKLQRLPPDLLYALPTTLLYSLEGLQEIVDWEKIMKLQSKDGSFLSSPASTAAVFMRTGNKKCLEFLNFVLKKFGNHVPCHYPLDLFERLWAVDTVERLGIDHHFKEEIKDALDYVYSHWDERGIGWARENPVPDIDDTAMGLRILRLHGYNVSSDVLKTFRDENGEFFCFLGQTQRGVTDMLNVNRCSHVAFPGETIMEEAKLCTERYLRNALEDTGAFDKWALKKNIRGEVEYALKYPWHRSMPRLEARSYIENYGPNDVWLGKTMYMMPNISNEKYLELAKLDFNRVQFFHRQELQDIRRWWNSSGFSQLGFTRERVAEIYFSPASFLFEPEFATCRAVYTKTSNFTVILDDLYDAHGTLDNLKLFSESVKRWDLSLVDQMPQDMKICFKGFYNTFNEIAEEGRKRQGRDVLSYIQKVWEVQLEAYTKEAEWSAVRYVPSYDEYIGNASVSIALGTVVLISALFTGEILTDDILSKIGRDSRFLYLMGLTGRLVNDTKTYQAERGQGEVASAVQCYMKDHPEISEEEALKHVYTIMDNALDELNREFVNNRDVPDTCRRLVFETARIMQLFYMDGDGLTLSHNMEIKEHVKNCLFQPVA

Annotated regions:
phrase: DWEKIMKLQSKDGSFLSSPASTAAVFMRTGNKKCLEFLNFVLKKFGNHVPCHYPLDLFERLWAVDTVERLGIDHHFKEEIKDALDYVYSHWDERGIGWARENPVPDIDDTAMGLRILRLHGYNVSSDVLKTFRDENGEFFCFLGQTQRGVTDMLNVNRCSHVAFPGETIMEEAKLCTERYLRNALEDTGAFDKWALKKNIRGEVEYA
type: DOMAIN
name: Terpene_synth_N
description: Terpene synthase, N-terminal domain

phrase: SNEKYLELAKLDFNRVQFFHRQELQDIRRWWNSSGFSQLGFTRERVAEIYFSPASFLFEPEFATCRAVYTKTSNFTVILDDLYDAHGTLDNLKLFSESVKRWDLSLVDQMPQDMKICFKGFYNTFNEIAEEGRKRQGRDVLSYIQKVWEVQLEAYTKEAEWSAVRYVPSYDEYIGNASVSIALGTVVLISALFTGEILTDDILSKIGRDSRFLYLMGLTGRLVNDTKTYQAERGQGEVASAVQCYMKDHPEISEEEALKHVYTIMDNALDELNREFVNNRDVPDTCRRLVFETARIMQLFYMDGDGLTLSHNMEIKEHVKNCLFQP
type: DOMAIN
name: Terpene_cyclase-like_1_C
description: Terpene cyclase-like 1, C-terminal domain

phrase: GFSQLGFTRERVAEIYFSPASFLFEPEFATCRAVYTKTSNFTVILDDLYDAHGTLDNLKLFSESVKRWDLSLVDQMPQDMKICFKGFYNTFNEIAEEGRKRQGRDVLSYIQKVWEVQLEAYTKEAEWSAVRYVPSYDEYIGNASVSIALGTVVLISALFTGEILTDDILSKIGRDSRFLYLMGLTGRLVNDTKTYQAERGQGEVASAVQCYMKDHPEISEEEALKHVYTIMDN
type: DOMAIN
name: Terpene_synthase_metal-bd
description: Terpene synthase, metal-binding domain
Protein sequence:
MKIEVIKRDKNLLEFYLVGEDHTFANLLSETLHENKHVTFAAYTIEHPVLMARKPRFRISTDGKITPEKALEEAAQKIFDRAKDVLEVWEGVIKK

Annotated regions:
phrase: LVGEDHTFANLLSETLHENKHVTFAAYTIEH
type: CONSERVED_SITE
name: RNA_pol_Rpb11_13-16kDa_CS
description: DNA-directed RNA polymerase Rpb11, 13-16kDa subunit, conserved site

phrase: LEFYLVGEDHTFANLLSETLHENKHVTFAAYTIEHPVLMARKPRFRISTDGKITPEKALEEAAQKIFDRAKDV
type: DOMAIN
name: RBP11-like_dimer
description: DNA-directed RNA polymerase, RBP11-like dimerisation domain
Protein sequence:
MSRYTGPSWRVSRRLGVSLSGTGKELARRAYAPGDHGRDRRGKLSEYGTQLREKQKLRFMYGMTERQFSNLFVRAGKIKEGTHGANFMALLERRLDNMVYRLGLATTRRQARQLVNHGHITVDGKRVDIPSYEVKVGQIIAVRDKSKNLDIIKNAVEAVVSRPSYVDFDADKLEGKLNRIPAREDMNADIDEALIVEFYNK

Annotated regions:
phrase: LERRLDNMVYRLGLATTRRQARQL
type: CONSERVED_SITE
name: Ribosomal_uS4_CS
description: Small ribosomal subunit protein uS4, conserved site

phrase: RYTGPSWRVSRRLGVSLSGTGKELARRAYAPGDHGRDRRGKLSEYGTQLREKQKLRFMYGMTERQFSNLFVRAGKIKEGTHGANFMALL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: RRLDNMVYRLGLATTRRQARQLVNHGHITVDGKRVDIPSYEVKVGQI
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: RYTGPSWRVSRRLGVSLSGTGKELARRAYAPGDHGRDRRGKLSEYGTQLREKQKLRFMYGMTERQFSNLFVRAGKIKEGTHGANFMALL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: RRLDNMVYRLGLATTRRQARQLVNHGHITVDGKRVDIPSYEVKVGQIIAVRDKSKNLDIIKNAV
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain
Protein sequence:
MGSASSKTRKDKAKSSTIAACPTDTAAAKACPTRLDDGLAQVAMFAGLRQVTMGVLRIDYDYQTNLGDILDPRSFDFRLVSATVEGLTFKRAQEGEPLPCYVMSNLDGAVKKLIDAGADFIVGDCGFLVYWQVYVRDFAQQYAGGRACPVMLSSLVLSLPLLATIPVGGKIGILTASKGSLMKMQKKLASVIELQKEEARTRAVPAAVQPSGIEINFSDPRFKVVGLDTVNSFKTALADDSGVDDRRSIAIEIAKYCKQVACEDPAICAWLIECTEAGGFSWAIKLGTGLPVWDPVTIGRFLSLGFTSSLPSVALTLGETGQVALDPNETDVSKGRPTKAEHRFGPEFEEMLQ

Annotated regions:
Protein sequence:
MSEIKLIVGLANPGAEYAHTRHNAGAWYVLELARICGVTLVADSKYFGLTARAVLHGKDVRLLIPTTYMNLSGKAVGALANFFRITPEEILVAHDELDLPPGVAKFKLGGGHGGHNGLKDIIAKLANDKNFYRLRLGIGHPGDKNQVSGYVLGKAPAKEQELIDAAIDEAVRSTEILFKQDMVKAMNRLHSFKAE

Annotated regions:
phrase: GHGGHNGLKD
type: CONSERVED_SITE
name: Pept_tRNA_hydro_CS
description: Peptidyl-tRNA hydrolase, conserved site
Protein sequence:
MIVVLGDAMIDLHVYGVVERISPEAPVPIVRHRSDRAVPGGAGNVAVNIAALGSAVTLIGIVGDDKDGGQLAALLQESRVTFEPVIVPGRATSLKTRVMAGNQHILRIDREDVSAISRNVEDSILEQVEAALSEAKILAISDYAKGLLTDRVLEESIGLARKRDIPVVIDPKRHDFSRYAGAHLIKPNRLELAAASGMPCSTDEEVEQAAGMMCKRTGAALMVTRSEKGISYFAPHMRAIHMPTAAKAVFDVSGAGDTAFAVIAYGMANRLTVEQIMRLANLAAGIVVSKPGTATVSLEEIRAATANYEAHPVFRKGEIVSRESAMAIREGWRRQGLSVGFTNGCFDLLHPGHIAVLRGAARHCDRLVVGLNSDSSVSRLKGASRPIQSEAARAAVLSAIDCVDLVVVFEEETPLSLIEMLMPDVLVKGADYTEDRIVGADVVRAAGGRVERVELVAGQSTTDLIRRVAPGPTEATATSSVRPVDSSRRRVTI

Annotated regions:
phrase: REGWRRQGLSVGFTNGCFDLLHPGHIAVLRGAARHCDRLVVGLNSDSSVSRLKGASRPIQSEAARAAVLSAIDCVDLVVVFEEETPLSLIEMLMPDVLVKGADYTEDRIVGADVVRAAGGRVERVELVAGQSTTDLIRR
type: DOMAIN
name: RfaE_dom_II
description: RfaE bifunctional protein, domain II

phrase: GGAGNVAVNIAALGSAVTLIGIV
type: CONSERVED_SITE
name: Carboh/pur_kinase_PfkB_CS
description: Carbohydrate/purine kinase, PfkB, conserved site

phrase: IVVLGDAMIDLHVYGVVERISPEAPVPIVRHRSDRAVPGGAGNVAVNIAALGSAVTLIGIVGDDKDGGQLAALLQESRVTFEPVIVPGRATSLKTRVMAGNQHILRIDREDVSAISRNVEDSILEQVEAALSEAKILAISDYAKGLLTDRVLEESIGLARKRDIPVVIDPKRHDFSRYAGAHLIKPNRLELAAASGMPCSTDEEVEQAAGMMCKRTGAALMVTRSEKGISYFAPHMRAIHMPTAAKAVFDVSGAGDTAFAVIAYGMANRLTVEQIMRLANLAAGIVVSKPGTATVSLEEI
type: DOMAIN
name: RfaE_dom_I
description: RfaE bifunctional protein, domain I

phrase: FTNGCFDLLHPGHIAVLRGAARHCDRLVVGLNSDSSVSRLKGASRPIQSEAARAAVLSAIDCVDLVVVFEEETPLSLIEMLMPDVLVKGADYTE
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: VGFTNGCFDLLHPGHIAVLRGAARHCDRLVVGLNSDSSVSRLKGASRPIQSEAARAAVLSAIDCV
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: IVVLGDAMIDLHVYGVVERISPEAPVPIVRHRSDRAVPGGAGNVAVNIAALGSAVTLIGIVGDDKDGGQLAALLQESRVTFEPVIVPGRATSLKTRVMAGNQHILRIDREDVSAISRNVEDSILEQVEAALSEAKILAISDYAKGLLTDRVLEESIGLARKRDIPVVIDPKRHDFSRYAGAHLIKPNRLELAAASGMPCSTDEEVEQAAGMMCKRTGAALMVTRSEKGISYFAPHMRAIHMPTAAKAVFDVSGAGDTAFAVIAYGMANRLTVEQIMRLANLAAGIVVSKPGTATV
type: DOMAIN
name: PfkB_dom
description: Carbohydrate kinase PfkB
Protein sequence:
MKRIVLLRLGHRPERDKRITTHVGLTARMLGAEGMLLASDDSGIVQSLEDVVRRWGGNFYIKNNVSFKQEIRNWKEGGGKVCHLSMYGVNLPDLADELKKCDKLMIVVGAEKVPPEIYQLADWNVAVGSQPHSEVAAVAITMDRIAEGEPLEKEFPGAELTIVPAERGKHVIENAGE

Annotated regions:
Protein sequence:
MSTPFYVSPEQLMRDRADFARKGIAKGRSAIALQYADGILFVAENRSPALHKVAEIYDRMAFAAVGRYNEFENLRIAGVRLADMRGYSYDRRDVTGRALANAYAQTLGAIFSSGGEKPLEVEILVAEVGTTAADDQIYRLTYDGSIADVRGYAVMGGPAEQVADYVGEHYQEGISLAGALRLAVDALGHDSSEVRQLEPDQIEVAVLDRTRTQVRKFKRISDQTLARILSESRPDTAPSPESSAHTEETETVDGGSYESAAGTSAADDAPIAPPEDPDDNRPL

Annotated regions:
Protein sequence:
MQRLLAPARRVLQVKRVMQESSLSPAHLLPAAQQRFSTIPPAPLAKTDTWPKDVGILALEVYFPAQYVDQTDLEKFNNVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQRLMERTKLPWDAVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWMESSYWDGRYALVVCGDIAVYPSGNARPTGGAGAVAMLIGPKAPLVLEQGLRGTHMENAYDFYKPNLASEYPLVDGKLSIQCYLRALDRCYAAYRRKIQNQWKQAGNNQPFTLDDVQYMIFHTPFCKMVQKSLARLMFNDFLSSSSDKQNNLYKGLEAFKGLKLEETYTNKDVDKALLKASLDMFNKKTKASLYLSTNNGNMYTSSLYGCLASLLSHHSAQELAGSRIGAFSYGSGLAASFFSFRVSKDASPGSPLEKLVSSVSDLPKRLDSRRRMSPEEFTEIMNQREQFYHKVNFSPPGDTSNLFPGTWYLERVDEMHRRKYARRPV

Annotated regions:
phrase: WPKDVGILALEVYFPAQYVDQTDLEKFNNVEAGKYTVGLGQTRMGFCSVQEDINSLCLTVVQRLMERTKLPWDAVGRLEVGTETIIDKSKAVKTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWMESSYWDGRYALVVCGDIAVYPSGNARPTGGAGAVAMLIGPKA
type: DOMAIN
name: HMG_CoA_synth_N
description: Hydroxymethylglutaryl-coenzyme A synthase, N-terminal

phrase: LVLEQGLRGTHMENAYDFYKPNLASEYPLVDGKLSIQCYLRALDRCYAAYRRKIQNQWKQAGNNQPFTLDDVQYMIFHTPFCKMVQKSLARLMFNDFLSSSSDKQNNLYKGLEAFKGLKLEETYTNKDVDKALLKASLDMFNKKTKASLYLSTNNGNMYTSSLYGCLASLLSHHSAQELAGSRIGAFSYGSGLAASFFSFRVSKDASPGSPLEKLVSSVSDLPKRLDSRRRMSPEEFTEIMNQREQFYHKVNFSPPGDTSNLFPGTWYLERVDEMHRRKYAR
type: DOMAIN
name: HMG_CoA_synt_C_dom
description: Hydroxymethylglutaryl-coenzyme A synthase, C-terminal domain

phrase: NTDIEGIDTTNACYG
type: ACTIVE_SITE
name: HMG_CoA_synt_AS
description: Hydroxymethylglutaryl-coenzyme A synthase, active site
Protein sequence:
MNLVVIGVNHKTAPVALRERLAFVGGDIQVAQAQLQQITAGSLIISTCNRTEIYALAPSTQLLANSDAALSKQSDLSLADEPVSTVDLTEQLITWLADFKQVPLEETRPYLYDYVDGQALTHMLRVAAGLDSMILGEPQIFGQIKRSVNQAKEQGFLTNQLNWVVEQIFAAAKRVRNETDVGTQAISLGYAASKLVTQIFDRPEETTFLLIAAGEMNRLVAQNIAGLGVKRILICNRTPERANLLAQELAHLGIQIEVHPLTELDSLLYQADIVSSCSGSMDMLIDKAMTRRALKKRRYKPMLMVDLAVPRDIDSSVGKLDDVYLYSIDDLQHVIAGNLEKRRQAAVEAELLVSHLVVEIERRFQVRKVGQDIHDYRALAAQKAEAVLNEALHELRTSEATAEEVMTELTRRLTQTLVHAPSSLMRRAARDGNNEAIDLIILGLKDAYRKK

Annotated regions:
phrase: EAELLVSHLVVEIERRFQVRKVGQDIHDYRALAAQKAEAVLNEALHELRTSEATAEEVMTELTRRLTQTLVHAPSSLMRRAARDGNNEAI
type: DOMAIN
name: 4pyrrol_synth_GluRdtase_dimer
description: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain

phrase: LVTQIFDRPEETTFLLIAAGEMNRLVAQNIAGLGVKRILICNRTPERANLLAQELAHLGIQIEVHPLTELDSLLYQADIVSSCSGSMDMLIDKAMTRRALKKRRYKPMLMVDLAVPRDIDSSVGKLDDVYLYSIDDLQH
type: DOMAIN
name: Shikm_DH/Glu-tRNA_Rdtase
description: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase

phrase: IGVNHKTAPVALRERLAFVGGDIQVAQAQLQQITAGSLIISTCNRTEIYALAPSTQLLANSDAALSKQSDLSLADEPVSTVDLTEQLITWLADFKQVPLEETRPYLYDYVDGQALTHMLRVAAGLDSMILGEPQIFGQIKRSVNQAKEQGFLTNQLNWVVEQIFAAAKRVRNE
type: DOMAIN
name: 4pyrrol_synth_GluRdtase_N
description: Glutamyl-tRNA reductase, N-terminal
Protein sequence:
MKPAGAFLLLISLACLFLSVDAVSQGGFQAFCSNYEKTLAPDGKSCPKTHKPVCGTDGKTYQNRCAFCQTAMERSLGKLGFKHEGKC

Annotated regions:
phrase: CPKTHKPVCGTDGKTYQNRCAF
type: DOMAIN
name: Kazal_dom
description: Kazal domain

phrase: GGFQAFCSNYEKTLAPDGKSCPKTHKPVCGTDGKTYQNRCAFCQTAMERSLGKLGFKHEGK
type: DOMAIN
name: Kazal_dom
description: Kazal domain

phrase: CSNYEKTLAPDGKSCPKTHKPVCGTDGKTYQNRCAFCQTAMERSLGKLGFKHEGK
type: DOMAIN
name: Kazal_dom
description: Kazal domain

phrase: FCSNYEKTLAPDGKSCPKTHKPVCGTDGKTYQNRCAFCQTAMERSLGKLGFKHEGK
type: DOMAIN
name: Kazal_dom
description: Kazal domain
Protein sequence:
MENKEAGTPPPIPSREGRLQPTLLLATLSAAFGSAFQYGYNLSVVNTPHKVFKSFYNETYFERHATFMDGKLMLLLWSCTVSMFPLGGLLGSLLVGLLVDSCGRKGTLLINNIFAIIPAILMGVSKVAKAFELIVFSRVVLGVCAGISYSALPMYLGELAPKNLRGMVGTMTEVFVIVGVFLAQIFSLQAILGNPAGWPVLLALTGVPALLQLLTLPFFPESPRYSLIQKGDEATARQALRRLRGHTDMEAELEDMRAEARAERAEGHLSVLHLCALRSLRWQLLSIIVLMAGQQLSGINAINYYADTIYTSAGVEAAHSQYVTVGSGVVNIVMTITSAVLVERLGRRHLLLAGYGICGSACLVLTVVLLFQNRVPELSYLGIICVFAYIAGHSIGPSPVPSVVRTEIFLQSSRRAAFMVDGAVHWLTNFIIGFLFPSIQEAIGAYSFIIFAGICLLTAIYIYVVIPETKGKTFVEINRIFAKRNRVKLPEEKEETIDAGPPTASPAKETSF

Annotated regions:
phrase: VLGVCAGISYSALPMYLGELAPKNL
type: CONSERVED_SITE
name: Sugar_transporter_CS
description: Sugar transporter, conserved site

phrase: TLSAAFGSAFQYGYNLSVVNTPHKVFKSFYNETYFERHATFMDGKLMLLLWSCTVSMFPLGGLLGSLLVGLLVDSCGRKGTLLINNIFAIIPAILMGVSKVAKAFELIVFSRVVLGVCAGISYSALPMYLGELAPKNLRGMVGTMTEVFVIVGVFLAQIFSLQAILGNPAGWPVLLALTGVPALLQLLTLPFFPESPRYSLIQKGDEATARQALRRLRGHTDMEAELEDMRAEARAERAEGHLSVLHLCALRSLRWQLLSIIVLMAGQQLSGINAINYYADTIYTSAGVEAAHSQYVTVGSGVVNIVMTITSAVLVERLGRRHLLLAGYGICGSACLVLTVVLLFQNRVPELSYLGIICVFAYIAGHSIGPSPVPSVVRTEIFLQSSRRAAFMVDGAVHWLTNFIIGFLFPSIQEAIGAYSFIIFAGICLLTAIYIYVVIPET
type: DOMAIN
name: MFS_dom
description: Major facilitator superfamily domain

phrase: SAVLVERLGRRHLLLA
type: CONSERVED_SITE
name: Sugar_transporter_CS
description: Sugar transporter, conserved site
Protein sequence:
MSEQYAALRGNVNLLGQLLGQTIKDAQGQAILDKVEEIRALSKSSRSGNENDRKTLIKVLHALSDEELLPVARSFNHFLNLANVAEQFHTVSRFNDVGFCQLNPLTQTLKTLATKANNGQLNHNHLADTLSKLHINLVLTAHPTEVTRRTIINKHVELSDCLASLERTDNLAQEREAILNRIAQLISQAWHTDDIRRSRPTPVDEAKWGYAVIENSLWHAVPRFLREFSQHVKEHLSLELPINYSPIEFTSWMGGDRDGNPYVTAQVTKEVLDHGRWMALDLYGRDLETLSTELSMSDASDELIALAGQEFEPYRCVIKTLKNQVLETVMHLGAKIKNQRSEAQDLITDINQIKHPIEVCYRSLLKCNMKVVADGLLLDVLHRLNSFGLRLAKLDVRQDSSRHGDVFSELTRYLGLGDYNQWQEQDKQAFLLTELNSRRPLIPKRWQPSPEVQEVLDTFDVIAQQDEQTFGLYIISMARTASDILAVQLLLKESGCSFKLPVAPLFETLDDLNDGHNVITTLLDNDWYRGQINNTQNVMIGYSDSAKDAGMMAAGWAQYEAMDKLVQLADKRGIELVLFHGRGGTVGRGGAPAAQALHSQPPGSLKGGLRVTEQGEMIRFKFGLPDVALQSLNIYAGAVLQSNLLPPPEPKPQWREVMALISEESCEHYRNVVRHDENFVPYFRMATPELELSKLPLGSRPAKRNPTGGVESLRAIPWIFAWSQNRLMLPAWLGALTGLQAALAKYGVETLQEMSLQWPFFRSRLEML

Annotated regions:
phrase: VMIGYSDSAKDA
type: ACTIVE_SITE
name: PEPCASE_His_AS
description: Phosphoenolpyruvate carboxylase, His active site

phrase: VLTAHPTEVTR
type: ACTIVE_SITE
name: PEP_COase_Lys_AS
description: Phosphoenolpyruvate carboxylase, Lys active site
Protein sequence:
MKTARRRSRELAVQAVYQSLINRTAAPEIAKNIREMSDFAKADEELFNKLFFGTQTNAAEYIRQIRPLLDRDEKDLNPIERAVLLTACHELSAMPETPYPVIINEAIEVTKTFGGTDGHKFVNGILDKLAAQIRPDEPKRR

Annotated regions:
phrase: RSRELAVQAVYQSLINRTAAPEIAKNIREMSDFAKADEELFNKLFFGTQTNAAEYIRQIRPLLDRDEKDLNPIERAVLLTACHELSAMPETPYPVIINEAIEVTKTFGGTDGHKFVNGILDKL
type: DOMAIN
name: NusB_RsmB_TIM44
description: NusB/RsmB/TIM44
Protein sequence:
MKVGVLALQGDVSEHIDAFTAALRKRGYTEDSPVIEVRNPEDLAGCAALAIPGGESTTISRLVDKNGLYKPIRDFKGGIFATCAGMILMATDVGDPRVHSLGLLDMTVDRNAFGRQRESFEADIRVQGLDGGSFHAVFIRGPVVTEARDGVVVLARTDKGIVAVEKGRHMALAFHPELGGDLRLHERFLKNLGV

Annotated regions:
phrase: ALAIPGGEST
type: CONSERVED_SITE
name: PdxT/SNO_CS
description: PdxT/SNO family, conserved site
Protein sequence:
MNNVSMRELLEAGAHFGHRTRFWNPKMSEYIFGSRNKIHIINLEKTLPMLSDVTNYVSRLAANKAKILFVGTKRAAQDSIREHAKRCGMPYVDHRWLGGMLTNYKTVRQSIFRLKELKEMKEKGLFNDMIKKEALMLTRELEKLERSLGGIENMGGLPDALFVVDVGFEHIAVEEARRLRIPVIGVVDTNNSPDNIDYVIPGNDDSMRAVDIYVRCVADAILDGKNSNTVGRVSSDSEFVEVTSNSNEEEKSGE

Annotated regions:
phrase: PDALFVVDVGFEHIAVEEARRLRI
type: CONSERVED_SITE
name: Ribosomal_uS2_CS
description: Small ribosomal subunit protein uS2, conserved site

phrase: MRELLEAGAHF
type: CONSERVED_SITE
name: Ribosomal_uS2_CS
description: Small ribosomal subunit protein uS2, conserved site
Protein sequence:
MTEVPWSVVPNGTDAAFLAGLGSLWGNSTVASTAAVSSSFQCALTKTGFQFYYLPAVYILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYPLKSLGRLKKKNAIYVSVLVWLIVVVAISPILFYSGTGTRKNKTVTCYDTTSNDYLRSYFIYSMCTTVAMFCIPLVLILGCYGLIVKALIYNDLDNSPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLDFQTPEMCDFNDRVYATYQVTRGLASLNSCVDPILYFLAGDTFRRRLSRATRKASRRSEANLQSKSEEMTLNILSEFKQNGDTSL

Annotated regions:
phrase: GNSVAIWMFVFHMKPWSGISVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYPLKSLGRLKKKNAIYVSVLVWLIVVVAISPILFYSGTGTRKNKTVTCYDTTSNDYLRSYFIYSMCTTVAMFCIPLVLILGCYGLIVKALIYNDLDNSPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLDFQTPEMCDFNDRVYATYQVTRGLASLNSCVDPIL
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM
Protein sequence:
MSKLIRRVVTVLALTSMASCFASGGIEAAVAESLITKIVASAETKPAPVPMTAKKVRLVRRNKQPVEQKSRGAFCDKEFYPCEEGRCQPVEAQQESCYGRLYSVKVNDDCNVEICQSVPEYATVGSPYPIEILAIGKKDCVDVVITQQLPCEAEFVSSDPETTPTSDGKLVWKIDRLGAGDKCKITVWVKPLKEGCCFTAATVCACPELRSYTKCGQPAICIKQEGPDCACLRCPVCYKIEVVNTGSAIARNVTVDNPVPDGYSHASGQRVLSFNLGDMRPGDKKVFTVEFCPQRRGQITNVATVTYCGGHKCSANVTTVVNEPCVQVNISGADWSYVCKPVEYSISVSNPGDLVLHDVVIQDTLPSGVTVLEAPGGEICCNKVVWRIKEMCPGETLQFKLVVKAQVPGRFTNQVAVTSESNCGTCTSCAETTTHWKGLAATHMCVLDTNDPICVGENTVYRICVTNRGSAEDTNVSLILKFSKELQPIASSGPTKGTISGNTVVFDALPKLGSKESVEFSVTLKGIAPGDARGEAILSSDTLTSPVSDTENTHVY

Annotated regions:
phrase: VCYKIEVVNTGSAIARNVTVDNPVPDGYSHASGQRVLSFNLGDMRPGDKKVFTVEFCPQRRGQITNVATVT
type: DOMAIN
name: OmcB-like_DUF11
description: Large cysteine-rich periplasmic protein OmcB-like, DUF11 domain

phrase: NDPICVGENTVYRICVTNRGSAEDTNVSLILKFSKELQPIASSGPTKGTISGNTVVFDALPKLGSKESVEFSVTLKGIAPGDARGEAILSSDTLTS
type: DOMAIN
name: OmcB-like_DUF11
description: Large cysteine-rich periplasmic protein OmcB-like, DUF11 domain

phrase: VCKPVEYSISVSNPGDLVLHDVVIQDTLPSGVTVLEAPGGEICCNKVVWRIKEMCPGETLQFKLVVKAQVPGRFTNQVAVTS
type: DOMAIN
name: OmcB-like_DUF11
description: Large cysteine-rich periplasmic protein OmcB-like, DUF11 domain

phrase: PVEYSISVSNPGDLVLHDVVIQDTLPSGVT
type: REPEAT
name: DUF11_rpt
description: DUF11 repeat
Protein sequence:
MASLPVLQKESVFQSGAHAYRIPALLYLPGQQSLLAFAEQRASKKDEHAELIVLRRGDYDAPTHQVQWQAQEVVAQARLDGHRSMNPCPLYDAQTGTLFLFFIAIPGQVTEQQQLQTRANVTRLCQVTSTDHGRTWSSPRDLTDAAIGPAYREWSTFAVGPGHCLQLHDRARSLVVPAYAYRKLHPIQRPIPSAFCFLSHDHGRTWARGHFVAQDTLECQVAEVETGEQRVVTLNARSHLRARVQAQSTNDGLDFQESQLVKKLVEPPPQGCQGSVISFPSPRSGPGSPAQWLLYTHPTHSWQRADLGAYLNPRPPAPEAWSEPVLLAKGSCAYSDLQSMGTGPDGSPLFGCLYEANDYEEIVFLMFTLKQAFPAEYLPQ

Annotated regions:
phrase: LLAFAEQRASKKDEHAELIVLRRGDYDAPTHQVQWQAQEVVAQARLDGHRSMNPCPLYDAQTGTLFLFFIAIPGQVTEQQQLQTRANVTRLCQVTSTDHGRTWSSPRDLTDAAIGPAYREWSTFAVGPGHCLQLHDRARSLVVPAYAYRKLHPIQRPIPSAFCFLSHDHGRTWARGHFVAQDTLECQVAEVETGEQRVVTLNARSHLRARVQAQSTNDGLDFQESQLVKKLVEPPPQGCQGSVISFPSPRSGPGSPAQWLLYTHPTHSWQRADLGAYLNPRPPAPEAWSEPVLLAKGSCAYSDLQSMGT
type: DOMAIN
name: Sialidase
description: Sialidase
Protein sequence:
MNFVAQYLTQQGVKKYRIDQVNQAIYRDFVFDFSQMTTLPQDMREDLQENLIFPLEVMKERVSKDKTQKILFKANDGKMIESVLMRHLHERNTVCVSSQVGCAMACTFCATGKMGITRNLTADEIVMQVVYFQKKMANEGQRIRNVVFMGMGEPLNNYENVMEAVRVLNDQKKCAIGIRHLTISTCGVVPMIEKLIKDPLKMNLAISLHAPNDKLRSSIMPINDAFPLAELMKVLRKYQAVTNNRIFYEYVLLKGVNDSLENAAELGKLLQGTNAHVNLIPYNPGADDAYEAPANNANRRFQKAIEEFGVPVTVRVTFGQDIDGACGQLALKS

Annotated regions:
phrase: SSQVGCAMACTFCATGKMGITRNLTADEIVMQVVYFQKKMANEGQRIRNVVFMGMGEPLNNYENVMEAVRVLNDQKKCAIGIRHLTISTCGVVPMIEKLIKDPLKMNLAISLHAPNDKLRSSIMPINDAFPLAELMKVLRKYQAVTNNRIFYEYVLLKGVNDSLENAAE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: AQYLTQQGVKKYRIDQVNQAIYRDFVFDFSQMTTLPQDMREDLQE
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: LHERNTVCVSSQVGCAMACTFCATGKMGITRNLTADEIVMQVVYFQKKMANEGQRIRNVVFMGMGEPLNNYENVMEAVRVLNDQKKCAIGIRHLTISTCGVVPMIEKLIKDPLKMNLAISLHAPNDKLRSSIMPINDAFPLAELMKVLRKYQAVTNNRIFYEYVLLKGVNDSLENAAELGKLLQGTNAHVNLIPYNPGADDAYEAPANNANRRFQKAIEEFGVPVTVRVTFGQ
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: AQYLTQQGVKKYRIDQVNQAIYRDFVFDFSQMTTLPQDMREDLQENLIFPLEVMKERVSKDKTQKILFKANDGKMIESVLMRHLHERNTVCVSSQVGCAMACTFCATGKMGITRNLTADEIVMQVVYFQKKMANEGQRIRNVVFMGMGEPLNNYENVMEAVRVLNDQKKCAIGIRHLTISTCGVVPMIEKLIKDPLKMNLAISLHAPNDKLRSSIMPINDAFPLAELMKVLRKYQAVTNNRIFYEYVLLKGVNDSLENAAELGKLLQGTNAHVNLIPYNPGADDAYEAPANNANRRFQKAIEEFGVPVTVRVTFGQDIDGACGQLAL
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MARNGPPGRGRSSLPFCLSRGVNCGQSRGMTQPDYQLEAALAAQGHIRIAGVDEVGRGPLAGPVVAAAVVLDPGAIPEGLNDSKKLTAARRERLYDILHANAQVSIAEASVEEIDALNILRASHLAMERAVAALNPAPDFLLIDGNLIPAGLSCPAEAVIKGDGRSVSIAAASIVAKTWRDRLMVDLAQQHPGYGWERNAGYPTKEHRSALQNLGVTPHHRRSFKTVHKILYQE

Annotated regions:
phrase: IRIAGVDEVGRGPLAGPVVAAAVVLDPGAIPEGLNDSKKLTAARRERLYDILHANAQVSIAEASVEEIDALNILRASHLAMERAVAALNPAPDFLLIDGNLIPAGLSCPAEAVIKGDGRSVSIAAASIVAKTWRDRLMVDLAQQHPGYGWERNAGYPTKEHRSALQNLGVTPHHRRSFKTVHKILYQ
type: DOMAIN
name: RNase_HII/HIII_dom
description: Ribonuclease HII/HIII domain

phrase: AGVDEVGRGPLAGPVVAAAVVLDPGAIPEGLNDSKKLTAARRERLYDILHANAQVSIAEASVEEIDALNILRASHLAMERAVAALNPAPDFLLIDGNLIPAGLSCPAEAVIKGDGRSVSIAAASIVAKTWRDRLMVDLAQQHPGYGWERNAGYPTKEHRSALQNLGVTPHHRRSFKT
type: DOMAIN
name: RNase_HII/HIII_dom
description: Ribonuclease HII/HIII domain
Protein sequence:
MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVVRHWDNIEVRAKDESQRLAIRDALTRIPGIHHILEVEDVPFTDMHDIFEKALVQYRDQLEGKTFCVRVKRRGKHDFSSIDVERYVGGGLNQHIESARVKLTNPDVTVHLEVEDDRLLLIKGRYEGIGGFPIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTNLRLIDNVSDTLILRPLISYDKEHIINLARQIGTEDFARTMPEYCGVISKSPTVKAVKSKIEAEEEKFDFSILDKVVEEANNVDIREIAQQTEQEVVEVETVNGFGPNDVILDIRSVDEQEDKPLRVEGIDVVSLPFYKLSTKFGDLDQNKTWLLWCERGVMSRLQALYLREQGFNNVKVYRP

Annotated regions:
phrase: DIREIAQQTEQEVVEVETVNGFGPNDVILDIRSVDEQEDKPLRVEGIDVVSLPFYKLSTKFGDLDQNKTWLLWCERGVMSRLQALYLREQGFNNVKVYR
type: DOMAIN
name: THII_Thiazole_biosynth_dom
description: ThiI, thiazole biosynthesis domain

phrase: IIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVVRHWDNIEVRAKDESQRLAIRDALTRIPGIHHILEVEDVPFTDMHDIFEKALVQYRDQLEGKTFCVRVKRRGKHDFSSIDVERYVGGGLNQHIESARVKLTNPDVTVHLEVEDDRLLLIKGRYEGIGGFPIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTNLRLIDNVSDTLILRPLISYDKEHIINLARQIGTEDFARTMPEYCGVISKSPTVKAVKSKIEAEEEKFDFSILDKVV
type: DOMAIN
name: ThiI_N
description: ThiI, N-terminal

phrase: LAIRDALTRIPGIHHILEVEDVPFTDMHDIFEKALVQYRDQLEGKTFCVRVKRRGKHDFSSIDVERYVGGGLNQHIESARVKLTNPDVTVHLEVEDDRLLLIKG
type: DOMAIN
name: THUMP_dom
description: THUMP domain

phrase: HILEVEDVPFTDMHDIFEKALVQYRDQLEGKTFCVRVKRRGKHDFSSIDVERYVGGGLNQHIESARVKLTNPDVTVHLEVEDDRLLLIKG
type: DOMAIN
name: THUMP_dom
description: THUMP domain

phrase: TDMHDIFEKALVQYRDQLEGKTFCVRVKRRGKHDFSSIDVERYVGGGLNQHIESARVKLTNPDVTVHLEVEDDRLL
type: DOMAIN
name: THUMP_dom
description: THUMP domain

phrase: KFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVVRHWDNIEVRAKDESQRLAIRDALTRIPGIHHILEVEDVPFTDMHDIFEKALVQYRDQLEGKTFCVRVKRRGKHDFSSIDVERYVGGGLNQHIESARVKLTNPDVTVHLEVEDDRLLLIKGRYEGI
type: DOMAIN
name: THUMP_ThiI
description: ThiI, THUMP domain

phrase: IGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTNLRLIDNVSDTLILRPLISYDKEHIINLARQIGTEDFARTMPEYCGVISKSPTVK
type: DOMAIN
name: ThiI_AANH
description: Thil, AANH domain

phrase: PEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVVRHWDNIEVRAKDESQRLAIRDALTRIPGIHH
type: DOMAIN
name: ThiI_fer
description: ThiI, ferredoxin-like domain

phrase: FGPNDVILDIRSVDEQEDKPLRVEGIDVVSLPFYKLSTKFGDLDQNKTWLLWCERGVMSRLQALYLREQGFNNVKV
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain

phrase: GTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVRQVAHYLWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKRMMVRAASKVAERYGVQALVTGEALGQVSSQTLTNLRLIDNVSDTLILRPLISYDKEHIINLARQIGTEDFARTMPEYCGVISKSPTVKAVKSKIEAEEEKFD
type: DOMAIN
name: ThiI_AANH
description: Thil, AANH domain
Protein sequence:
MSSHVPAVTAPTPSTVSENSASKDSHSSPMPESKPVSVNRKKQKRREKAARLAAQRQAANGHAPSDTLDVNGSSSTVLDNDVSHEQSGGGYDDKSEKVLNGHGHNTQELPHPSEHDPQGTTSRKSKKKRGKKGRNGSQASSTPMSTPSISLSNAPRPPLSSHFGSQSSSKLLKERSIWNTSTQEERENIKTFWLELGEEERRQLVKVEKDAVLKKMKEQQKHSCSCTVCGRKRTAIEEELEVLYDAYYDELEQYANNTQGSFERGPAILPPPGLYQPPLRSPGQHTHTHGQFHPSRGRIHEPEDDEDLEEDYDEDEEDDEPYSDEEYEDDEGSAARADFFAFGNSLTVKVADDLLKNDGKHFIDMMEQLAERRMQREEDTQYGIAAAHQSLHSSHNHGPLDDEDYDDEEDEDYDSQEEEEYEEDEMDAMTEEQRMEEGRRMFQIFAARMFEQRVLTAYREKVAEQRQQKLIEELLEEENLNEQRNAKKAREAQKRKDKKRLAKLAKDEEKARREAQKAAEEAAAKAEQERKLEEQRKKKEEQRKKREAERKAQEEERARKEAEKHKRLREERERQEEAERRQREQKEQEKKRREEAKRKEREERELREQKAKQERERKAQDEQSRRERERVAQEQAKRAPNLQPVSPVSPPPESATPVVSKAPTPAKGRRPSQQGSHSSSPRSQSASAEASQVSPRSAPLSQSSGSSIPKYGSGHPILHPHPGAPMSPLGRTHPPGLSPSNPPGLSGLVPRPPMGHELPTYPPHSSPYMNQLRGFPAPNGIPVLPGMNGTRPMPPGRGFPLDAPGIPFHAQPPFSGIFSPQPSGLPHGHSRQPSNSFERSPLDTSAQPFPISRPSPIKRPPSTQQEQRNSRRDVDDLSAQLGSSALLDDSDVPLTSSQLSQSLPGTTPAPVMPGPARASFAGSSLFPDPLSVAKHANFPVSPVIGGSTWGAQMPFGAPFPGGPTWGYTPANNNAFGAGIHHRAHTSRPVAIRLLVIQACKQLSTMSPSKDSGGYHDVNAVLRQVEQLRPSNEPSISLKEMLDICDTEGNAQNGGGTFSIKSGQTGELVKFEPDAVSTTTGHRGSIVPGEIGSPIPSSTMPALGGIGLGTPPSSALRQFSSPTTGF

Annotated regions:
Protein sequence:
MIRQLVFATNNLNKTKEVRSLLADQYEVLNLQDIGCTTDIPETADTFAGNAGLKSRFVVENYQLDCFADDSGLEVEALNNEPGIYSARYAGERSDAANLDLVLQKMEGQQNRNARFITVISLIQNGKEFLFEGTIQGTLRESRTGENGFGYDPIFQPDGYQITFAEMDMAEKNKISHRAIAMRKLIAFLKEQAV

Annotated regions:
Protein sequence:
MSTRDLPHSFSELSYGWVKRIRAEFTVGKSKEQLLAEDYHSTTDEDSEVVTSVKANSLWPAFASGAGLFSDGYVNNSISTVLFCLKKIYPDEITKSNAINNIASIAFVGTVVGQLGFGYISDRIARKGGMMAANVMLIFFTLMCAVGSWGVTVQGFFACLTVWRFFLGVAIGAEYPTSSVIASEFANQLPPGKRNRYFSWFTNAMIDSGFVVSAFVPFVLIWIFTEKHLRALWRVAIGLGVIPPLSLFFMRLKMKNSSSFQKLHMKNVKYRDYPWWLIVKFYWFRLTIVSLIWFIYDFSAYSFGNFNTIIIGEIIPEAPIWKQWGWSIVFNLFYIPGAFLGAISADYIGPRLTLALGVGIQGVIGIAMSACLNSLKKHIAGFVVVFGIFTTFGEFGPGDNIGLLASKTSATAIRGQYYGIAAAIGKIGAFVGTWVFPAIQSKYANNANPDLQLQVPFYISSALCLFSACLAIFFCPQVGQDAIYKEDHDFVQYLSNNGFDINMLGEGGDVREVCRESDSLEKGKRDDFQVDNNSL

Annotated regions:
phrase: PAFASGAGLFSDGYVNNSISTVLFCLKKIYPDEITKSNAINNIASIAFVGTVVGQLGFGYISDRIARKGGMMAANVMLIFFTLMCAVGSWGVTVQGFFACLTVWRFFLGVAIGAEYPTSSVIASEFANQLPPGKRNRYFSWFTNAMIDSGFVVSAFVPFVLIWIFTEKHLRALWRVAIGLGVIPPLSLFFMRLKMKNSSSFQKLHMKNVKYRDYPWWLIVKFYWFRLTIVSLIWFIYDFSAYSFGNFNTIIIGEIIPEAPIWKQWGWSIVFNLFYIPGAFLGAISADYIGPRLTLALGVGIQGVIGIAMSACLNSLKKHIAGFVVVFGIFTTFGEFGPGDNIGLLASKTSATAIRGQYYGIAAAIGKIGAFVGTWVFPAIQSKYANNANPDLQLQVPFYISSALCLFSACLAIFFCPQV
type: DOMAIN
name: MFS_dom
description: Major facilitator superfamily domain