nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MKSYHIAIVGATGAAGTELLRVLERRNFPVANLRALASARSAGKSVRFRGESVPVEKLADRSFDKIDIAFFCTDGDVSKEYVPIACQADAIAIDKSSAFRMEPHVPLVIPEINADDVHRHRGLIANPNCTTTVMLMALYPLHRIFHVRRVFAASYQAVSGSGTRGVEALTRQIKDAAADPESFEQSGSSAFAPRLRGGAAEDKPQSATVFPHPIAFNLLPHVDSFLDSGYTKEEVKMQDEARKIMHSPALRVSATCVRVPVYRAHSVAVSAEFQRPLSVEQAREILSKAPGLELVDEPHSNRYPTPLSVAGKDNCQVGRVRLDCAFENGLSFWVSGDQLLKGAALNAVQIAELL

Annotated regions:
phrase: IAIVGATGAAGTELLRVLERRNFPVANLRALASARSAGKSVRFRGESVPVEKLADRSFDKIDIAFFCTDGDVSKEYVPIACQADAIAIDKSSAFRMEPHVPLVIPEINADDV
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: LYPLHRIFHVRRVFAASYQAVSGSGTRGVEALTRQIKDAAADPESFEQSGSSAFAPRLRGGAAEDKPQSATVFPHPIAFNLLPHVDSFLDSGYTKEEVKMQDEARKIMHSPALRVSATCVRVPVYRAHSVAVSAEFQRPLSVEQAREILSKAPGLELVDEPHSNRYPTPLSVAGKDNCQVGRVRLDCAFENGLSFWVSGDQLL
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: HIAIVGATGAAGTELLRVLERRNFPVANLRALASARSAGKSVRFRGESVPVEKLADRSFDKIDIAFFCTDGDVSKEYVPIACQADAIAIDKSSAFRMEPHVPLVIPEINADDVHR
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MKKGFSLPLWVAGAARSALKKLVGLSFENYELIKIPYEKKEIKIEIHSVGLLKNDSHALGITFAKSGLDLDITQNLEIWTIASLEKISFENSLQRVPINIIAGSGVGIKEDTSEICISNFAKEVLYENLLDIIPEGFNLKLEIIFPNGAFLAERTSNQSFGIVDGLSIIGTSAETYSSASPDQLEEAKNNLAKLIQNDFKGEVVFVIGENGLNLLKTHNVNLPIIKIGNWIGPLLVDAAIKKVKTVILFGYHGKLIKLAGGIFHTHNHLADGRIEILVYLAVQENVPFEIIVKLSKLDNIENALLFLEKFNQSTADKLFKRLSNTIEKRSFAYVNRYVKTDMEIASIIFDRKRKIRWAGIYGKKYISYFQ

Annotated regions:
Protein sequence:
MWINRLVKHPSYSVLRFYTKRLCTVSVKSLREFGVLPNSTICHSVYPRRTYVMGRAVINDILIKKSYSTHTVCAIDRSKDENNGSAYDKFEAKGIPIDVHTLKRIISSSGMDESEFSKSISYLFAKTVDPEPKDVLSLEDLSFLLNKLYTQRFQIRRICRDINAKYSEFWFKLFSLYAEKVDAKRNQVNLRNTKLDACEIFDANLMIKNFIELGQLGKAQKILSFILDRNPDILLSPKNADISTIVHFLQLRCGALAPYWKIPDNSEQKQGFLRKMVRLGAKNTSIRLSSTYKAMDHQTLLKIADLALQEKKLLNSEDLLSTLIQSFGHLGQTQILERCIEHIWQISPQEFPSHVVIKHRGCYPSSKILVSILVSFYFNDHDLHRGLSILDSFIKHYPDVKLDALFWRRLFQLSHFAWTPANDKKATSVVRCWHLMKQWYASKRLRPSVDYETLRQLYDIMKKTGNFPLGIDVLRSFKPGIERTRAENAGKVNNIIIKYQKCIIKELVNRGRFSAVREFIDNYGFDRKMTKDLNIFCANRMFLRSKKMKNKIENKKEREKVRLDSFDDDEDDGMIIGSLW

Annotated regions:
Protein sequence:
MAVEGRPPTPKSILRGHKAQVHAATFIRNNERLVTGDADGFVIAWDLTIMRPRAVWQAHDNAILGIAGWGNDRIITHGRDNKLIVWKLIGDDEARMSTTLPLDPCAEPRPKPWILHLLEVNTMNFCSFSYCPVSAPVLPGQQEGQSQDTAQESRFESELLIAVPNTLASEAIDIFHLPSQTRRHTVKLGDKNGMVMAVALFNQADSLTLVAGYENGLAIVAHRDPVKNDWVPLYQATCHSQPILSLSVSPARDFFLTSSADAVIAKHPLPSVVSQDTTSTHATTTQAAQVSESEESSSPVNTGDKAVGKSLLGAALAKEKQNPSSQPKRSLKPEEVLTHPLKTVNTKHAGQQSIEIRSDGLIFATAGWDSKIRVYSTKTLKEVAVLKWHQVGCYAVAFAHIAPNTGAPSINDQNPKATVSTTGTQPATSDSLGHGTQKPNMDQSLTVVPKLVELTVRDKRLRQAKAAHWLAAGSKDGKVSLWDVF

Annotated regions:
phrase: LVTGDADGFVIAWD
type: CONSERVED_SITE
name: WD40_repeat_CS
description: WD40 repeat, conserved site

phrase: LAAGSKDGKVSLWDV
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: DWVPLYQATCHSQPILSLSVSPARDFFLTSSADAVIAKH
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: PPTPKSILRGHKAQVHAATFIRNNERLVTGDADGFVIAW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LTHPLKTVNTKHAGQQSIEIRSDGLIFATAGWDSKIRVY
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: IMRPRAVWQAHDNAILGIAGWGNDRIITHGRDNKLIVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: TLKEVAVLKWHQVGCYAVAFAHIAPNTGAPSINDQNPKATVSTTGTQPATSDSLGHGTQKPNMDQSLTVVPKLVELTVRDKRLRQAKAAHWLAAGSKDGKVSLW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: PKSILRGHKAQVHAATFIRNNERLVTGDADGFVIAW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: HWLAAGSKDGKVSLW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: PLYQATCHSQPILSLSVSPARDFFLTSSADA
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LRGHKAQVHAATFIRNNERLVTGDADGFVIAWD
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LAAGSKDGKVSLWD
type: CONSERVED_SITE
name: WD40_repeat_CS
description: WD40 repeat, conserved site
Protein sequence:
METIFALATAQGKAGVAVIRVSGPHAIEIGEKLTRRTLPARGMIFSKLKDSAGEILDEALVLSFTSPDSFTGENIVEFQLHGSIAVVSAVMSAIEETGVARLADPGEFTRRALDNGKLDLTQVEGLADLIDAETEAQRKQAQVILAGTLGDLADRWRTDLIRAASLIEVTIDFADEEVPVDVTPEVKQLLSGVLHDIEKEVDGVAIAERIREGFEVAIVGSPNVGKSTLLNALAGRTAAITSEYAGTTRDVIEVRMDLAGLPVTLLDTAGLRETDDHVEGIGIRLAQERAERADIRVFLAEEDESFSIQMREGDLRLLPKADERRSAKGAISGRTGQGVDDLVSRISDTLRNRTAHDGIATRARHRETMNRAVLSLRQAIEVVEQGPEFYDLAAEDMRSAIRALELLVGRINVENLLDEIFSSFCLGK

Annotated regions:
phrase: ETIFALATAQGKAGVAVIRVSGPHAIEIGEKLTRRTLPARGMIFSKLKDSAGEILDEALVLSFTSPDSFTGENIVEFQLHGSIAVVSAVMSAIEETGVARLADPGEFTRRALDN
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal

phrase: TIFALATAQGKAGVAVIRVSGPHAIEIGEKLTRRTLPARGMIFSKLKDSAGEILDEALVLSFTSPDSFTGENIVEFQLHGSIAVVSAVMSAIEETGVARLADPGEFTRRALDNG
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal

phrase: REGFEVAIVGSPNVGKSTLLNALAGRTAAITSEYAGTTRDVIEVRMDLAGLPVTLLDTAGLRETDDHVEGIGIRLAQERAERADIRVFLAEEDESFSIQMREGDLRLLPKADERRSAKGAISGRTGQGVDDLVSRISDT
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain

phrase: LTQVEGLADLIDAETEAQRKQAQVILAGTLGDLADRWRTDLIRAASLIEVTIDFADEEVPVDVTPEVKQLLSGVLHDIEKEVDGVAIAERIREGFEVAIVGSPNVGKSTLLNALAGRTAAITSEYAGTTRDVIEVRMDLAGLPVTLLDTAGLRETDDHVEGIGIRLAQERAERADIRVFLAEEDESFSIQMREGDLRLLPKADERRSAKGAISGRTGQGVDDLVSRISDTLRNRTAHDGIATRARHRETMNRAVLSLRQAIEVVEQGPEFYDLAAEDMRSAIRALELLVGRINVENLLDEIFSSF
type: DOMAIN
name: MnmE_helical
description: MnmE, helical domain

phrase: VAIVGSPNVGKSTLLNALAG
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: LLDTAGLRETDDHVE
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: EVAIVGSPNVGKSTLLNALAGRTAAITSEYAGTTRDVIEVRMDLAGLPVTLLDTAGLRETDDHVEGIGIRLAQERAERADIRVFLAEEDESF
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: FEVAIVGSPNVGKSTLLNALAGRTAAITSEYAGTTRDVIEVRMDLAGLPVTLLDTAGLRETDDHVEGIGIRLAQERAERADIRVF
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: GFEVAIVGSPNVGKSTLLNALAGRTAAITSEYAGTTRDVIEVRMDLAGLPVTLLDTAGLRETDDHVEGIGIRLAQERAERADIRVFLAEEDESFSIQMREGDLRLLPKADERRSAKGAISGRTGQGVDDLVSRISDTL
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain
Protein sequence:
MTKKKAYKPGSATIAQNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVMFKNGEAFLFGATITPLNVASTHVVCEPMRTRKLLLNKRELDSLFGRVNREGYTVVALSMYWKNAWVKVKIGVAKGKKDNDKRDDIRDREWKLDKARIMKHANR

Annotated regions:
phrase: AGLALQGWEVKS
type: CONSERVED_SITE
name: SsrA-bd_prot_CS
description: SsrA-binding protein, conserved site
Protein sequence:
MSGDEVQFHENYDDYITYLKRRIRQLELQVRMLEADKERLERELSRLRSEMSRLRQPPAFAGTVIEVLDDDRAIVQNYNGPRFVVRIAPWIERDKLRPGARVALDQRTMAIIELLPSSKDPTVLGFEVIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKLKNVDLRVIAEITEGASGADLKAIATEAGMFAIRERRTYVTQEDFLKAVDKVLGNERKLLQQITSHEIIYG

Annotated regions:
phrase: NVDLRVIAEITEGASGADLKAIATEAGMFAIRERRTYVTQEDF
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: VLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVP
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: GTVIEVLDDDRAIVQNYNGPRFVVRIAPWIERDKLRPGARVALDQRTMAIIELL
type: DOMAIN
name: Prot_ATP_ID_OB_2nd
description: Proteasomal ATPase, second OB domain

phrase: PPKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPLP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VKVIAATNRPDILDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site
Protein sequence:
MSLINTQVQPFKVNAFHNGKFIEVTEESLKGKWSVLIFMPAAFTFNCPTEIEDAANNYGEFQKAGAEVYIVTTDTHFSHKVWHETSPAVGKAQFPLIGDPTHQLTNAFGVHIPEEGLALRGTFVINPEGVIKTVEIHSNEIARDVGETVRKLKAAQYTAAHPGEVCPAKWKEGEKTLAPSLDLVGKI

Annotated regions:
phrase: AAQYTAAHPGEVCPAKWKEGEKTLAPSL
type: DOMAIN
name: Peroxiredoxin_C
description: Peroxiredoxin, C-terminal

phrase: NTQVQPFKVNAFHNGKFIEVTEESLKGKWSVLIFMPAAFTFNCPTEIEDAANNYGEFQKAGAEVYIVTTDTHFSHKVWHETSPAVGKAQFPLIGDPTHQLTNAFGVHIPEEGLALRGTFVINPEGVIK
type: DOMAIN
name: AhpC/TSA
description: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant

phrase: SLINTQVQPFKVNAFHNGKFIEVTEESLKGKWSVLIFMPAAFTFNCPTEIEDAANNYGEFQKAGAEVYIVTTDTHFSHKVWHETSPAVGKAQFPLIGDPTHQLTNAFGVHIPEEGLALRGTFVINPEGVIKTVEIHSNEIARDVGETVRKLKAAQ
type: DOMAIN
name: Thioredoxin_domain
description: Thioredoxin domain
Protein sequence:
MSRLRRFNRKILSLSSDYTHDGESDQEDVSILPLDTEEQEELIQKFETNAHITNKLYINLLSILYLLYGGLLMILVRKSRGYIKLALLAGANSLICSCITLRYDIVNDYLLFKKFKLRVSNFSINIINIILLVLMAWISFNHVVEDKKTVLCLQVPMFLFWVAVLVKRWARNIEDEIADLRCLKYKYKNA

Annotated regions:
Protein sequence:
MAKIRIHEIAKELGYDSKEIIEKANELGLGIKTASNAVEPEIAAAIYEYIQTREIPEAFKKNIKTPTAKKPKKENIKEQEKLNESEKKEPKKEEKLKQEVKKEELKVEKENVKEEEKQEIIDAHKPQSLASATLAKRRGLVIVKKKKDEEEIQVKKEEVKNSNDISINNEERLSLKTMFSNADESLKKKKKEKKSFVASKKESTEKMNFLDEHDFGDISLDDEDEVVLPDFSVKEQEKPQNINKKQPNFIRQAVGNSAGFGLEGGIQRRSRKKPPKKIEKKEVEEVSSVAISKEIRVYEFADKIGKSTSEVISKLFMLGMMTTKNDFLDEDAIEILAAEFGIEINIINEADEFDYVKDYEEETDEKDLVTRAPVITIMGHVDHGKTSLLDYIRKSRVASGEAGGITQHVGAYMVEKNGRKITFIDTPGHEAFTAMRARGASITDIVIIVVAADDGVKPQTKEAINHAKAAGVPIIIAINKMDKEAANPDMVKTQLAEMEIMPVEWGGSYEFVGVSAKTGMGIEDLLEIVLLQADILELKANPKSFAKASIIESSVQKGRGAVATIIVQNGTLTVGSTVVAGEAYGKVRAMSDDQGKALKEIKPGECGVIVGLSEVADAGEILIAVKTDKEAREYANKRHEYNRQKELSKSTKVSIDELGAKIKEGNLKALPVILKADVQGSLEALKASLEKLRNDEIKVNIIHSGVGGITQSDIELASASENSIVLGFNIRPTGEVKERAKDKGVEIKTYNVIYNLLDDVKALLGGMMSPIISEEQLGQAEIRQVINVPKIGQIAGCMVTEGVINRGAKIRLIRDGVVVYEGNVSSLKRFKDDAKEVAKGYECGVGIEGCDDMRVGDYIESYKEVEEQASL

Annotated regions:
phrase: KEIRVYEFADKIGKSTSEVISKLFMLGMMTTKNDFLDEDAIEILAAEFGI
type: DOMAIN
name: IF2_N
description: Translation initiation factor IF-2, N-terminal

phrase: MAKIRIHEIAKELGYDSKEIIEKANELGLGIKTASNAVEPEIAAAIYEYIQ
type: DOMAIN
name: IF2_N
description: Translation initiation factor IF-2, N-terminal

phrase: AKASIIESSVQKGRGAVATIIVQNGTLTVGSTVVAGEAYGKVRAMSDDQGKALKEIKPGECGVIVGLSEVADAGEILI
type: DOMAIN
name: EF-G-like_DII
description: Elongation factor G-like, domain II

phrase: PVITIMGHVDHGKTSLLDYIRKSRVASGEAGGITQHVGAYMVEKNGRKITFIDTPGHEAFTAMRARGASITDIVIIVVAADDGVKPQTKEAINHAKAAGVPIIIAINKMDKEAANPDMVKTQLAEMEIMPVEWGGSYEFVGVSAKTGMGIEDLLEIV
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: PVITIMGHVDHGKTSLLDYIRKSRVASGEAGGITQHVGAYMVEKNGRKITFIDTPGHEAFTAMRARGASITDIVIIVVAADDGVKPQTKEAINHAKAAGVPIIIAINKMDKEAANPDMVKTQLAEMEIMPVEWGGSYEFVGVSAKTGMGIEDLLEI
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: GQIAGCMVTEGVINRGAKIRLIRDGVVVYEGNVSSLKRFKDDAKEVAKGYECGVGIEGCDDMRVGDY
type: DOMAIN
name: EFTu-like_2
description: Translation elongation factor EFTu-like, domain 2

phrase: KELSKSTKVSIDELGAKIKEGNLKALPVILKADVQGSLEALKASLEKLRNDEIKVNIIHSGVGGITQSDIELASASENSIVLGFNIRPTGEVKERAKDKGVEIKTYNVIYNLLDDV
type: DOMAIN
name: TIF_IF2_dom3
description: Translation initiation factor IF- 2, domain 3

phrase: AKASIIESSVQKGRGAVATIIVQNGTLTVGSTVVAGEAYGKVRAMSDDQGKALKEIKPGECGVIVGLSEVADAGEILIAVKTDKEAREYANKRH
type: DOMAIN
name: IF2_II
description: Translation initiation factor IF-2, domain II

phrase: TRAPVITIMGHVDHGKTSLLDYIRKSRVASGEAGGITQHVGAYMVEKNGRKITFIDTPGHEAFTAMRARGASITDIVIIVVAADDGVKPQTKEAINHAKAAGVPIIIAINKMDKEAANPDMVKTQLAEMEIMPVEWGGSYEFVGVSAKTGMGIEDLLEIVLLQADIL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain
Protein sequence:
MIIRTLRSQLRLPKPVYISPPCRYYSTDLEKLKKESDTTESDNSASATGVIDKTHNEVLLYYDHIYPFTTSRNVVKQYLSRFSLPWSTAYDDEKLKQKVWDLSSPLETTAKITEFVPLRRDCGAFVKFKYPPEVPATKFIEEIRENVEKNEQERVNSNILTKLYHQIWRNVPKVYSVKGTPWIEDLRRFPSPKLSVKFEGDPLTEEELYVLFRRYGLINEIEPGATEAFIYFHSTRAAISAKHCITGMVLNGGKTTLHIQFVAIKRSNFLVSLISNHTKIAIPVLIALLATFAVLIFDPIREWFIEYKILHNRKSFDQFKESRWFKYLYIPYRTITGWVYSSYDYIDSQIQEVTGSSCSEEDDSSNGSNIVDGQSVRDLKNESNMFWIERYEKSKQLQLWIMENANTFIIVKGPQGSGKEEFVLEHSLGSDERLNKKVLVLECDQLGKARSDNNLINTTASQLGYFPVFTWTNTVSRFVDLGVQGLTGQKSGLSESKETQIKNMFSLATQAIRKITTNEYNKYVKSVERRNKRLKDDEKIEVLKEEQFLQQHPEAKPIIVLNKYSRRADVSSNDFIPPLVADWASGLVQNNTAHVIFLTADVGSLQLLNDALPNQVFKDISLSDASMSSSRQYVCDVLKVKDTSTLDECLEPLGGRMLDLQSFIRRIKSGESPQQAINEMISQAAELINTFFLNSHHKFGAGDSNWDPSQVWLIMKLLSECDTINYSELVKSPLFKVSKETLEILTTLEKYDLISLKRDKGVLDKISTGRPLFKAAFANIISDLRIWKLYETEYIGRLISLEAAKIQKLEEELEKIYKIGKVDGRIDYVSQKIEASNKKILDLEKQAADVASYTGKPDGKSFLGIKF

Annotated regions:
phrase: RYEKSKQLQLWIMENANTFIIVKGPQGSGKEEFVLEHSLGSDERLNKKVLVLECDQLGKARSDNNLINTTASQLGYFPVFTWTNTVSRFVDLGVQGLTGQKSGLSESKETQIKNMFSLATQAIRKITTNEYNKYVKSVERRNKRLKDDEKIEVLKEEQFLQQHPEAKPIIVLNKYSRRADVSSNDFIPPLVADWASGLVQNNTAHVIFLTADVGSLQLLNDALPNQVFKDISLSDASMSSSRQYVCDVLKVKDTSTLDECLEPLGGRMLDLQSFIRRIKSGESPQQAINEMISQAAELINTFFLNSHHKFGAGDSNWDPSQVWLIMKLLSECDTINYSELVKSPLFKVSKETLEILTTLEKYDLISLKRDKGVLDKISTGRPLFKAAFANIISDLRIWKLYETEYIGRLISLEAAKIQKLEEELEKIYK
type: DOMAIN
name: Mt_escape_2_C
description: Mitochondrial escape protein 2, C-terminal

phrase: RFPSPKLSVKFEGDPLTEEELYVLFRRYGLINEIEPGATEAFIYFHSTRAAISAKHCITGMVLNGGKTTLHIQFVAIKRS
type: DOMAIN
name: Yme2_RRM
description: Yme2, RNA recognition motif
Protein sequence:
MRDKRIAFVTSNEHKFREVKVILEEYGIEVEHSQLAIVEIQAMRIEEIASAKAKSAYEILRRGVIVEDDALAIDALNGFPGPYSSYVFKTIGNEGILRLMHNIKDRSASFISVIAYCSSSSSDGEPLIFVGKVDGIIAESIRGNGWGYDPIFIPKGSSRTYAEMGDDEKNRVSHRRLALERFARWLKER

Annotated regions:
Protein sequence:
MSTLRLLISDSYDPWFNLAVEECIFRQMPATQRVLFLWRNADTVVIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFMAGKPEYDKTISTSIVLNALNALGVSAEASGRNDLVVKTAEGDRKVSGSAYRETKDRGFHHGTLLLNSDLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLPGITHEQVCEAITEAFFAHYGERVEAEIISPDKTPDLPNFAETFARQSSWEWNFGQAPEFSHLLDERFTWGGVELHFDVEKGHITRAQVFTDSLNPAPLEALAGRLQGCLYRADMLQQECEALLVDFPEQEKELRELSAWIAGAVR

Annotated regions:
phrase: PATQRVLFLWRNADTVVIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFMAGKPEYDKTISTSIVLNALNALGVSAEASGRNDLVVKTAEGDRKVSGSAYRETKDRGFHHGTLLLNSDLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLPGITHEQVCEAITEAFFAHYGER
type: DOMAIN
name: BPL_LPL_catalytic
description: Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain

phrase: PEFSHLLDERFTWGGVELHFDVEKGHITRAQVFTDSLNPAPLEALAGRLQGCLYRADMLQQECEALLVDFPEQEKELRELSAW
type: DOMAIN
name: Lipoate_protein_ligase_C
description: Lipoate protein ligase, C-terminal

phrase: DPWFNLAVEECIFRQMPATQRVLFLWRNADTVVIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFMAGKPEYDKTISTSIVLNALNALGVSAEASGRNDLVVKTAEGDRKVSGSAYRETKDRGFHHGTLLLNSDLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLPGITHEQVCEAITEA
type: DOMAIN
name: BPL_LPL_catalytic
description: Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain
Protein sequence:
MASKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLFGPKGVNIGGAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASGPPKGPSRASSVTTFTGEPNTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPCYGILFGPKGVNTGAVGSYIYDRDPEGKVQP

Annotated regions:
phrase: CPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKT
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: NTCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPCYGILFG
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: CPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPC
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: CPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYAT
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: TCPRCSKKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHK
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: KCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHK
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: SKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKTLTPGGHAEHDGKPFCHKPCYATLFG
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: CPKCDKTVYFAEKVSSLGKDWHKFCLKCERCSKT
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type
Protein sequence:
MKTLILLIQFFTRIPLPVQINMDEINLKKGSALLPFVGVIIGAWNWLIFTLVALLMPLPVAIIAGLFAEIIITGGFHVDALADTADGLFSSRKRERMLEIMKDSRVGANGVIAICFYFLFYGSLFLSVPDTQQIGWLFFVLPIVAKGVTMLLFAKMTYAGSKEGLGSIFLGVPWWPVVIAQVIVLVALGAFFSYIGVIAYAGVILFTIIYRAFVYKRIGGMNGDTLGAGGQMGQLICLFCLVLLWGLI

Annotated regions:
Protein sequence:
MMLRTEEMILNVGPQHPSTHGVFRLILKIDGEIIQEATPVIGYLHRGTEKIAEGLQYTQIIPYTDRMDYLSAMTNNYVLCHAVETMMGIEVPERAEYLRVLAMELGRIASHLVWWGTYLLDLGATSPFLYAFREREMIINLLNELSGARLTFNYMRIGGVKWDAPDGWIDKVKQFVPYMREKLHGYHELVTGNEIFRQRVTGVGRYTKEEAISYSLSGVNLRSTGVKWDLRKDEPYSIYDRFDFDVPVREGGDCLARYECRMAEIEQSLRIIEQACEQFPPEGPIMGKVPRIIKAPPGETFVRIEAPRGEIGCYIASDGKKEPYRLKFRRPSFYNLQILPKLLKGENLANVIAILGSIDIVLGEVDG

Annotated regions:
phrase: IKAPPGETFVRIEAPRGEIGCYIASDGKKEPYRLKFRRPSFYNLQILPKLLKGENLANVIAILGSIDIVLGEV
type: DOMAIN
name: NADH_Q_OxRdtase_suD
description: NADH-quinone oxidoreductase, subunit D

phrase: DLGATSPFLYAFREREMIINLLNELSGARLTFNYMRIGGVKWDAPDGWIDKVKQFVPYMREKLHGYHELVTGNEIFRQRVTGVGRYTKEEAISYSLSGVNLRSTGVKWDLRKDEPYSIYDRFDFDVPVREGGDCLARYECRMAEIEQSLRIIEQACEQFPPEGPIMGKVPR
type: DOMAIN
name: NADH_Q_OxRdtase_suD
description: NADH-quinone oxidoreductase, subunit D
Protein sequence:
MYKFRIQGSDKPLSGEVTISGAKNAALPILFASLLAEEPVEVANVPKLRDVDTTMELLKRLGAEVSRNGSVHIDASGVNDFCAPYDLVKTMRASIWALGPLVARFGKGQVSLPGGCAIGARPVDLHIHGLEQLGATIKLEEGYVKAEVDGRLKGAHIVMDKVSVGATITVMCAATLAEGTTVLENAAREPEIVDTANFLNAIGAKVSGMGTDTITIEGVERLGGGYHEVVADRIETGTFLVAAAVSGGKIVCKNTKAHLLEAVLAKLEEAGADVQTGDDWISLDMTGRELKAVNIRTAPHPAFPTDMQAQFTLLNMMAKGSGIITETIFENRFMHIPELQRMGAHAEIEGNTAICGDTDGLSGAQVMATDLRASASLVIAGCIAKGETIVDRIYHIDRGYDKIEDKLTALGANIERVHSDDL

Annotated regions:
phrase: KPLSGEVTISGAKNAALPILFASLLAEEPVEVANVPKLRDVDTTMELLKRLGAEVSRNGSVHIDASGVNDFCAPYDLVKTMRASIWALGPLVARFGKGQVSLPGGCAIGARPVDLHIHGLEQLGATIKLEEGYVKAEVDGRLKGAHIVMDKVSVGATITVMCAATLAEGTTVLENAAREPEIVDTANFLNAIGAKVSGMGTDTITIEGVERLGGGYHEVVADRIETGTFLVAAAVSGGKIVCKNTKAHLLEAVLAKLEEAGADVQTGDDWISLDMTGRELKAVNIRTAPHPAFPTDMQAQFTLLNMMAKGSGIITETIFENRFMHIPELQRMGAHAEIEGNTAICGDTDGLSGAQVMATDLRASASLVIAGCIAKGETIVDRIYHIDRGYDKIEDK
type: DOMAIN
name: Enolpyruvate_Tfrase_dom
description: Enolpyruvate transferase domain
Protein sequence:
MDGIKYAVFTDKSIRLLGNNQYTSNVESGSTRTEIKHWVELFFGVKVIAMNSHRLPGKGRRMGPIMGHTMHYRRMIITLQPGYSIPPLRKKRT

Annotated regions:
phrase: RRMIITLQPGYSIPP
type: CONSERVED_SITE
name: Ribosomal_uL23_CS
description: Large ribosomal subunit protein uL23, conserved site
Protein sequence:
MKFILIDQAPELPIEFLPKGDCYRKGRLFGPKGEEIENTTDCDLLQDARRAAEAHRRARYKVQSIIRPGITLLEIVRSIEDSTRTLLEGERNNGIGFPAGMSMNSCAAHYTVNPGEEDIVLKEDDVLKVDFGTHSNGRIMDSAFTVAFQENLQPLLMAAREGTETGIRSLGIDARVCDIGRDINEVITSYEVEIEGKTWPIRPVSDLHGHSISQFKIHGGISIPAVNNRDTTRIKGDTFYAVETFATTGKGFINDRSPCSHFMLNVHKSRKLFNKDLIKVYEFVKSSFGTLPFSPRHLDHYNLVEGGSLKSVNLLTMMGLFTPYPPLNDIDGSKVAQFEHTVYLSENGKEILTRGDDY

Annotated regions:
phrase: DVLKVDFGTHSNGRIM
type: BINDING_SITE
name: Pept_M24A_MAP2_BS
description: Peptidase M24A, methionine aminopeptidase, subfamily 2, binding site

phrase: ARRAAEAHRRARYKVQSIIRPGITLLEIVRSIEDSTRTLLEGERNNGIGFPAGMSMNSCAAHYTVNPGEEDIVLKEDDVLKVDFGTHSNGRIMDSAFTVAFQENLQPLLMAAREGTETGIRSLGIDARVCDIGRDINEVITSYEVEIEGKTWPIRPVSDLHGHSISQFKIHGGISIPAVNNRDTTRIKGDTFYAVE
type: DOMAIN
name: Pept_M24
description: Peptidase M24
Protein sequence:
MQSVIAQAKRIVVKVGSSLVTNDGKGLDHDAIARWAAQIARLRVAGKEVVLVSSGAIAEGMQRLGWARRPKEIHELQAAAAVGQMGLAQVYESQFTRYGIRTAQVLLTHADLADRERYLNARSTLLTLLSLGVVPIINENDTVVTDEIKFGDNDTLGALVTNLIEGDALVILTDQRGLYTADPRKDPAAQFVDEALAGTPELEAMAGGAGTSIGRGGMLTKILAAKRAAKSGAHTTIASGREANVLERLAAGEAIGTQLLAPTGRLTARKQWMADHLQLRGRVVIDGGAVEKLTSGGKSLLPIGVVEVQGEFARGEVIACVDAQGKEVARGITNYSSAESRLIARKPSSEIESVLGHLNEPELIHRDNLVLV

Annotated regions:
phrase: RIVVKVGSSLVTNDGKGLDHDAIARWAAQIARLRVAGKEVVLVSSGAIAEGMQRLGWARRPKEIHELQAAAAVGQMGLAQVYESQFTRYGIRTAQVLLTHADLADRERYLNARSTLLTLLSLGVVPIINENDTVVTDEIKFGDNDTLGALVTNLIEGDALVILTDQRGLYTADPRKDPAAQFVDEALAGTPELEAMAGGAGTSIGRGGMLTKILAAKRAAKSGAHTTIASGREANVLERLAAGEAIG
type: DOMAIN
name: G5K_ProB
description: Glutamate-5-kinase domain

phrase: KRIVVKVGSSLVTNDGKGLDHDAIARWAAQIARLRVAGKEVVLVSSGAIAEGMQRLGWARRPKEIHELQAAAAVGQMGLAQVYESQFTRYGIRTAQVLLTHADLADRERYLNARSTLLTLLSLGVVPIINENDTVVTDEIKFGDNDTLGALVTNLIEGDALVILTDQRGLYTADPRKDPAAQFVDEALAGTPELEAMAGGAGTSIGRGGMLTKILAAKRAAKSGAHTT
type: DOMAIN
name: Asp/Glu/Uridylate_kinase
description: Aspartate/glutamate/uridylate kinase

phrase: GRVVIDGGAVEKLTSGGKSLLPIGVVEVQGEFARGEVIACVDAQGKEVARGITNYSSAESRLIARKPSSEIESV
type: DOMAIN
name: PUA
description: PUA domain

phrase: TSIGRGGMLTKILAAKR
type: CONSERVED_SITE
name: Glutamate_5-kinase_CS
description: Glutamate 5-kinase, conserved site

phrase: GRVVIDGGAVEKLTSGGKSLLPIGVVEVQGEFARGEVIACVDAQGKEVARGITNYSSAESRLIARKPSSEIESVLGHLNEPEL
type: DOMAIN
name: PUA
description: PUA domain
Protein sequence:
MYLSELQLNHYRNYESVDVHFSPDTNVLIGENAQGKTNLLEAIYVLALARSHRTNTDRELIQWHEDFAKITGLVQRSAGKTPLELVLSQKGKKAKVNHLEQAKLSQYIGQLNVVLFAPEDLNIVKGSPAVRRHFIDMEFGQMSSKYLYNISQYKSILKQRNQYLKQLQRRQAKDLVYLGVLSDQLAAYGAEVTVARRQFLQQMEKWAQKLHQEITKDREVLTFKYQSQIPEEQLDQSVEELYQQFQTLYEKQQIREVEQGTTLIGPHRDDVQFLVNDKDVQAFGSQGQQRTTALSVKLAEIDLMKAQTGEYPILLLDDVLSELDDLRQTHLLKTFQNKVQTFLTTTSLENVKKEIIATPRVFTVTNGVVIEEQAE

Annotated regions:
phrase: YLSELQLNHYRNYESVDVHFSPDTNVLIGENAQGKTNLLEAIYVLALARSHRTNTDRELIQWHEDFAKITGLVQRSAGKTPLELVLSQKGKKAKVNHLEQAKLSQYIGQLNVVLFAPEDLNIVKGSPAVRRHFIDMEFGQMSSKYLYNISQYKSILKQRNQYLKQLQRRQAKDLVYLGVLSDQLAAYGAEVTVARRQFLQQMEKWAQKLHQEITKDREVLTFKYQSQIPEEQLDQSVEELYQQFQTLYEKQQIREVEQGTTLIGPHRDDVQFLVNDKDVQAFGSQGQQRTTALSVKLAEIDLMKAQTGEYPILLLDDVLSELDDLRQTHLLKTFQNKVQTFLTTTSLENVKKEIIATPRVFTVTN
type: DOMAIN
name: RecF/RecN/SMC_N
description: RecF/RecN/SMC, N-terminal

phrase: ILLLDDVLSELDDLRQTH
type: CONSERVED_SITE
name: DNA-binding_RecF_CS
description: DNA-binding, RecF, conserved site

phrase: FAPEDLNIVKGSPAVRRHFI
type: CONSERVED_SITE
name: DNA-binding_RecF_CS
description: DNA-binding, RecF, conserved site
Protein sequence:
MEQELMRIGVSLPDNLLNKFDSIIEGRGYSSRSEGIRDSIRTYINQYEWMSDIRGRRVGTITIIYDHTKRGLSNAVADIQHDYSDLIKSSVHIHLDHDNCLEVIIFDGEGELIKEMDERLMALKGVKYVKLNTAPPAEKI

Annotated regions:
phrase: RIGVSLPDNLLNKFDSIIEGRGYSSRSEGIRDSIRTYIN
type: DOMAIN
name: CopG
description: Ribbon-helix-helix protein, CopG

phrase: VGTITIIYDHTKRGLSNAVADIQHDYSDLIKSSVHIHLDHDNCLEVIIFDGEGELIKEMDERLMALKGVKYVKLN
type: DOMAIN
name: TF_NikR_Ni-bd_C
description: Transcription factor, NikR, nickel binding C-terminal