Protein sequence:
MNPLQLLQPLPAEVKGTKLLAHWDSGATITCIPESFLEDEQPIKQTLIKTIHGEKQQNVYYLTFKVKGRKVEAEVIASPYEYILLSPTDVPWLTQQPLQLTILVPLQEYQDRILNKTALPEEQKQQLKALFTKYDNLWQHWENQVGHRKIRPHNIATGDYPPRPQKQYPINPKAKPSIQIVIDDLLKQGVLTPQNSTMNTPVYPVPKPDGRWRMVLDYREVNKTIPLTAAQNQHSAGILATIVRQKYKTTLDLANGFWAHPITPDSYWLTAFTWQGKQYCWTRLPQGFLNSPALFTADAVDLLKEVPNVQVYVDDIYLSHDNPHEHIQQLEKVFQILLQAGYVVSLKKSEIGQRTVEFLGFNITKEGRGLTDTFKTKLLNVTPPKDLKQLQSILGLLNFARNFIPNFAELVQTLYNLIASSKGKYIEWTEDNTKQLNKVIEALNTASNLEERLPDQRLVIKVNTSPSAGYVRYYNESGKKPIMYLNYVFSKAELKFSMLEKLLTTMHKALIKAMDLAMGQEILVYSPIVSMTKIQKTPLPERKALPIRWITWMTYLEDPRIQFHYDKTLPELKHIPDVYTSSIPPLKHPSQYEGVFCTDGSAIKSPDPTKSNNAGMGIVHAIYNPEYKILNQWSIPLGHHTAQMAEIAAVEFACKKALKVPGPVLVITDSFYVAESANKELPYWKSNGFVNNKKEPLKHISKWKSIAECLSIKPDITIQHEKGHQPINTSIHTEGNALADKLATQGSYVVNCNTKKPNLDAELDQLLQGNNVKGYPKQYTYYLEDGKVKVSRPEGVKIIPPQSDRQKIVLQAHNLAHTGREATLLKIANLYWWPNMRKDVVKQLGRCKQCLITNASNKTSGPILRPDRPQKPFDKFFIDYIGPLPPSQGYLYVLVIVDGMTGFTWLYPTKAPSTSATVKSLNVLTSIAIPKVIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYHPQSSGKVERKNSDIKRLLTKLLVGRPTKWYDLLPVVQLALNNTYSPVLKYTPHQLLFGIDSNTPFANQDTLDLTREEELSLLQEIRASLYQPSTPPASSRSWSPVVGQLVQERVARPASLRPRWHKPSTVLEVLNPRTVVILDHLGNNRTVSIDNLKPTSHQNGTTNDTATMDHLEQNEQSS

Annotated regions:
phrase: VKGTKLLAHWDSGATITCIP
type: DOMAIN
name: Spumavirus_A9
description: Spumavirus aspartic protease A9

phrase: FLEDEQPIKQTLIKTIHGEK
type: DOMAIN
name: Spumavirus_A9
description: Spumavirus aspartic protease A9

phrase: VYYLTFKVKGRKVEAEVIASP
type: DOMAIN
name: Spumavirus_A9
description: Spumavirus aspartic protease A9

phrase: LLSPTDVPWLTQQPLQLTILV
type: DOMAIN
name: Spumavirus_A9
description: Spumavirus aspartic protease A9

phrase: QEYQDRILNKTALPEEQKQQL
type: DOMAIN
name: Spumavirus_A9
description: Spumavirus aspartic protease A9

phrase: TKYDNLWQHWENQVGHRKIR
type: DOMAIN
name: Spumavirus_A9
description: Spumavirus aspartic protease A9

phrase: IATGDYPPRPQKQYPINPKAK
type: DOMAIN
name: Spumavirus_A9
description: Spumavirus aspartic protease A9

phrase: LKQGVLTPQNSTMNTPVYPVPKPDGRWRMVLDYREVNKTIPLTAAQNQHSAGILATIVRQKYKTTLDLANGFWAHPITPDSYWLTAFTWQGKQYCWTRLPQGFLNSPALFTADAVDLLKEVPNVQVYVDDIYLSHDNPHEHIQQLEKVFQILLQAGYVVSLKKSEIGQRTVEFLGFN
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: VPKPDGRWRMVLDYREVNKTIPLTAAQNQHSAGILATIVRQKYKTTLDLANGFWAHPITPDSYWLTAFTWQGKQYCWTRLPQGFLNSPALFTADAVDLLKEVPNVQVYVDDIYLSHDNPHEHIQQLEKVFQILLQAGYVVSLKKSEIGQRTVEFLGFN
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: RSWSPVVGQLVQERVARPASLRPRWHKPSTVLEVLNPRTVVILDHLGNNRTVSIDNLKPTSH
type: DOMAIN
name: SH3_11
description: Retroviral integrase, C-terminal SH3 domain

phrase: RPQKPFDKFFIDYIGPLPPSQGYLYVLVIVDGMTGFTWLYPTKAPSTSATVKSLNVLTSIAIPKVIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYHPQSSGKVERKNSDIKRLLTKLLVGRPTKWYDLLPVVQLALNNTYSPVLKYTPHQLLFGI
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: VKGTKLLAHWDSGATITCIPESFLEDEQPIKQTLIKTIHGEKQQNVYYLTFKVKGRKVEAEVIASPYEYILLSPTDVPWLTQQPLQLTILVPLQEYQDRILNKTALPEEQKQQLKALFTKYDNLWQHWENQVGHRKIRPHNIATGDYPPRPQKQYPINPKAK
type: DOMAIN
name: Spumavirus_A9
description: Spumavirus aspartic protease A9

phrase: MNPLQLLQPLPAEVKGTKLLAHWDSGATITCIPESFLEDEQPIKQTLIKTIHGEKQQNVYYLTFKVKGRKVEAEVIASPYEYILLSPTDVPWLTQQPLQLTILVPLQEYQDRILNKTALPEEQKQQLKALFTKYDNLWQHWE
type: DOMAIN
name: Spumavirus_A9
description: Spumavirus aspartic protease A9

phrase: QKPFDKFFIDYIGPLPPSQGYLYVLVIVDGMTGFTWLYPTKAPSTSATVKSLNVLTSIAIPKVIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYH
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: WTEDNTKQLNKVIEALNTASNLEERLPDQRLVIKVNTSPSAGYVRYYNESGKKPIMYLNYVFSKAELKFSMLEKLLTTMHKALIKAMDLAMGQEI
type: DOMAIN
name: RT_RNaseH_2
description: Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain

phrase: FCTDGSAIKSPDPTKSNNAGMGIVHAIYNPEYKILNQWSIPLGHHTAQMAEIAAVEFACKKALKVPGPVLVITDSFYVAESANKELPYWKSNGFVNNKKEPLKHISKWKSIAECLSIKPDITIQHEKGHQPINTSIHTEGNALADKLATQG
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: SQYEGVFCTDGSAIKSPDPTKSNNAGMGIVHAIYNPEYKILNQWSIPLGHHTAQMAEIAAVEFACKKALKVPGPVLVITDSFYVAESANKELPYWKSNGFVNNKKEPLKHISKWKSIAECLSIKPDITIQHEKGHQPINTSIHTEGNALADKLATQGS
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: PPQSDRQKIVLQAHNLAHTGREATLLKIANLYWWPNMRKDVVKQLGRCKQCLITN
type: DOMAIN
name: Integrase_H2C2
description: Integrase zinc-binding domain