nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MRVKETQMNWRNLRKWGTLILGLVIICSASDNLWVTVYYGVPVWKDADTTLFCASDAKAHETEVHNVWATHACVPTDPNPQEIHLENVTENFNMWKNNMVEQMQEDVISLWDQSLKPCVKLTPLCVTLNCTNAQLTNVTYTTDAPNIGNITDEIRNCSFNMTTELRDKKQKVHALFYKLDIVQMNSSEYRLINCNTSVIKQACPKVSFDPIPIHYCTPAGYAILKCNDKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEEEIIIRSENLTDNVKNIIVHLNKSVEINCTRPSNNTRTSIHIGPGQVFYRTEDIIGNIRKAYCQINGTEWNKTLTQVIEKLKEHFPNKTIGFQSPSGGDLEITMHHFNCRGEFFYCDTTKLFNNTIKNGTITLPCKIKQVVNMWQGAGQAMYAPPIKGSINCVSNITGILLTRDGGNQNATEIFRPGGGNIRDNWRSELYKYKVVQIEPLGIAPTRAKRRVVEREKRAVGIGAMIFGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQKFLGLWGCSGKIICTTAVPWNSTWSNKSFEEIWNNMTWIEWEREISNYTSQIYEILTESQNQQDRNEKDLLELDKWASLWNWFDITNWLWYIKIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQTPTHHQREPDRPERIEEEGGEQGRDRSVRLVSGFLALFWDDLRSLCLFSYHRLTDFISIAARTVELLGH

Annotated regions:
phrase: VQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQKFLGLWGCSGKIICTTAVPWNSTWSNKSFEEIWNNMTWIEWEREISNYTSQIYEILTESQNQQDRNEKDLLELD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKDADTTLFCASDAKAHETEVHNVWATHACVPTDPNPQEIHLENVTENFNMWKNNMVEQMQEDVISLWDQSLKPCVKLTPLCVTLNCTNAQLTNV
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: ITDEIRNCSFNMTTELRDKKQKVHALFYKLDIVQMNSSEYRLINCNTSVIKQACPKVSFDPIPIHYCTPAGYAILKCNDKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEEEIIIRSENLTDNVKNIIVHLNKSVEINCTRPSNNTRTSIHIGPGQVFYRTEDIIGNIRKAYCQINGTEWNKTLTQVIEKLKEHFPNKTIGFQSPSGGDLEITMHHFNCRGEFFYCDTTKLFNNTIKNGTITLPCKIKQVVNMWQGAGQAMYAPPIKGSINCVSNITGILLTRDGGNQNATEIFRPGGGNIRDNWRSELYKYKVVQIEPLGIAPTRAKRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: MGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQKFLGLWGCSGKIICTTAVPWNSTWSNKSFEEIWNNMTWIEWEREISNYTSQIYEILTESQNQQDRNEKDLLELDKWASLWNWFDITNWLWYIKIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQTP
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MQVYYDKDCDLSIIQGMKVAIIGFGSQGHAHAANLQDSGVDVTVGLRPGSSSIKKAEGYGLKTADVATAVAGADVVMILTPDEFQSVLYKEEIEPNIKQGAVLAFAHGFAIIYNQIEPRKDLDVIMIAPKAPGHTVRSEFVRGGGIPDLIAIQQDASGKAKEIALSYASGVGGGRTGIIETTFRDECETDLFGEQAVLCGGAVELVKAGFDTLVEAGYEPEMAYFECLHELKLIVDLMFEGGIADMNYSISNNAEYGEYVTGPRVINDESRAAMREALKNIQTGEYAKQFILEGQSNYPSMTAARRLNEEHGIEVVGRKLRAMMPWIASNKIVDQEKN

Annotated regions:
phrase: MQVYYDKDCDLSIIQGMKVAIIGFGSQGHAHAANLQDSGVDVTVGLRPGSSSIKKAEGYGLKTADVATAVAGADVVMILTPDEFQSVLYKEEIEPNIKQGAVLAFAHGFAIIYNQIEPRKDLDVIMIAPKAPGHTVRSEFVRGGGIPDLIAIQQDASGKAKEIALSYASGVGGGRTGIIE
type: DOMAIN
name: KARI_N
description: Ketol-acid reductoisomerase, N-terminal

phrase: TFRDECETDLFGEQAVLCGGAVELVKAGFDTLVEAGYEPEMAYFECLHELKLIVDLMFEGGIADMNYSISNNAEYGEYVTGPRVINDESRAAMREALKNIQTGEYAKQFILEGQSNYPSMTAARRLNEEHGIEVVGRKLRAMMPW
type: DOMAIN
name: KARI_C
description: Ketol-acid reductoisomerase, C-terminal

phrase: FRDECETDLFGEQAVLCGGAVELVKAGFDTLVEAGYEPEMAYFECLHELKLIVDLMFEGGIADMNYSISNNAEYGEYVTGPRVINDESRAAMREALKNIQTGEYAKQFILEGQSNYPSMTAARRLNEEHGIEVVGRKLRAMMP
type: DOMAIN
name: KARI_C
description: Ketol-acid reductoisomerase, C-terminal

phrase: IQGMKVAIIGFGSQGHAHAANLQDSGVDVTVGLRPGSSSIKKAEGYGLKTADVATAVAGADVVMILTPDEFQSVLYKEEIEPNIKQGAVLAFAHGFAIIYNQIEPRKDLDVIMIAPKAPGHTVRSEFVRGGGIPDLIAIQQDASGKAKEIALSYASGVGGGRT
type: DOMAIN
name: KARI_N
description: Ketol-acid reductoisomerase, N-terminal
Protein sequence:
MGFWENNKDSITSGLKSAGKYGYQGTKYVAKTGYKASKKHYNNSKARRERKSGKKNSSDEEYDSEDEMEYERKPTDIRSLKDPKSFPPPPLKPGQKTYTGQQQQQMPNGQASYAFQGAYQGQPGAGSTEQSQYAQPQYNQYPQQQLQQGVMPQQQQLQQGVVPQQPPIYGEQVPPYGSNSNATSYQSLPQQNQPQNAIPSQVSLNSASQQSTGFVSQNLQYGTQSSNPAPSPSFQNGLQCHQQPQYVSHGSTNLGQSQFPSGQQQQPTTQFGQQVLPSPAQPQQQQQGQPLPPPRGQVILPAPGEPLSNGFGQQQQQQQQQQQPLNQNNALLPQMNVEGVSGMAAVQPVYGQAMSSTTNMQDSNPSYGASPMQGQPPVGGQPPVPVRMQPQPPQPMQQGNIYPIEPSLDSTGSTPHFEVTPFDPDAPAPKPKIDIPTVDVSSLPPPPTHRDRGAVVHQEPAPSGKIQPNTTSSAASLPAKHSRTTTADNERNSGNKENDESTSKSSILGHYDVDVNIMPPPKPFRHGLDSVPSEHTTKNAPERAVPILPPRNNVEPPPPPSRGNFERTESVLSTNAANVQEDPISNFLPPPKPFRHTETKQNQNSKASPVEMKGEVLPGHPSEEDRNVEPSLVPQSKPQSQSQFRRAHMETQPIQNFQPPPKPFRRSQSSNSSDSSYTIDGPEANHGRGRGRIAKHHDGDEYNPKSENSTENGRLGDAPNSFIRKRAPTPPAPSRSEKLHEGTITSEVDSSKDANKYEKSIPPVTSSIQAQQSTKKAPPPVVKPKPRNFSLKANEYPKELTREATGQDEVLNSITNELSHIKLRKTNVNLEKLGGSKKVKDSSPVPSDLDEKYVSASGSITPPRPPPSRSSPKKVPPVVPKKNDNLKKKPPVVPKKKPLLKSLEPRPIEMERAYSGDISAADDNLNPFERYKRNVVPQEDDRLHKLK

Annotated regions:
Protein sequence:
MPHLGPLRRRAWAALLGQLLRPPSTVCTRGCHSQVAKAVLTSEQLKSHQEKPNFVIKVPKGTRDLSPQQMVVREKILDKIISCFKRHGAKGLDTPAFELKEMLTEKYEDNFGLMYDLKDQGGELLSLRYDLTVPFARYLAMNKLKKMKRYQVGKVWRRESPAIAQGRYREFCQCDFDIAGEFDPMIPDAECLRIMCEILSGLQLGDFLIKVNDRRVVDGIFAVCGVPESKLRTICSSMDKLDKMSWEGVRHEMVAKKGLAPEVADRIGDFVQYHGGISLVEDLFKDPRLSQSQLALQGLGDLKLLFEYLRLFGIADKISLDLSLARGLDYYTGVIYEAVLLESPAQAGKETLSVGSVAAGGRYDNLVAQFDPKGHHVPCVGLSIGVERIFYLVEQKMKMSGEKVRTTETQVFVATPQKNFLQERLKIIAELWDAGIKAEMLYKNNPKLLTQLHYCEKADIPLMVIIGEQERNEGVIKLRSVASREEVTINRESLVAEIQKRLSES

Annotated regions:
phrase: QVFVATPQKNFLQERLKIIAELWDAGIKAEMLYKNNPKLLTQLHYCEKADIPLMVIIGEQERNEGVIKLRSVASREEVTINRESLVAEIQK
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: GTRDLSPQQMVVREKILDKIISCFKRHGAKGLDTPAFELKEMLTEKYEDNFGLMYDLKDQGGELLSLRYDLTVPFARYLAMNKLKKMKRYQVGKVWRRESPAIAQGRYREFCQCDFDIAGEFDPMIPDAECLRIMCEILSGLQLGDFLIKVNDRRVVDGIFAVCGVPESKLRTICSSMDKLDKMSWEGVRHEMVAKKGLAPEVADRIGDFVQYHGGISLVEDLFKDPRLSQSQLALQGLGDLKLLFEYLRLFGIADKISLDLSLARGLDYYTGVIYEAVLLESPAQAGKETLSVGSVAAGGRYDNLVAQFDPKGHHVPCVGLSIGVERIFYLVEQKMKMSGEKVRTTETQVFVAT
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: GTRDLSPQQMVVREKILDKIISCFKRHGAKGLDTPAFELKEMLTEKYEDNFGLMYDLKDQGGELLSLRYDLTVPFARYLAMNKLKKMKRYQVGKVWRRESPAIAQGRYREFCQCDFDIAGEFDPMIPDAECLRIMCEILSGLQLGDFLIKVNDRRVVDGIFAVCGVPESKLRTICSSMDKLDKMSWEGVRHEMVAKKGLAPEVADRIGDFVQYHGGISLVEDLFKDPRLSQSQLALQGLGDLKLLFEYLRLFGIADKISLDLSLARGLDYYTGVIYEAVLLESPAQAGKETLSVGSVAAGGRYDNLVAQFDPKGHHVPCVGLSIGVER
type: DOMAIN
name: HisRS-like_core
description: Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain

phrase: ETQVFVATPQKNFLQERLKIIAELWDAGIKAEMLYKNNPKLLTQLHYCEKADIPLMVIIGEQERNEGVIKLRSVASREEVTINRESLVAEI
type: DOMAIN
name: HisRS_anticodon
description: Histidyl-anticodon-binding

phrase: QMVVREKILDKIISCFKRHGAKGLDTPAFELKEMLTEKYEDNFGLMYDLKDQGGELLSLRYDLTVPFARYLAMNKLKKMKRYQVGKVWRRESPAIAQGRYREFCQCDFDIAGEFDPMIPDAECLRIMCEILSGLQLGDFLIKVNDRRVVDGIFAVCGVPESKLRTICSSMDKLDKMSWEGVRHEMVAKKGLAPEVADRIGDFVQYHGGISLVEDLFKDPRLSQSQLALQGLGDLKLLFEYLRLFGIADKISLDLSLARGLDYYTGVIYEAVLLESPAQAGKETLSVGSVAAGGRYDNLVAQFDPKGHHVPCVGLSIGVERIFYLV
type: DOMAIN
name: HisRS-like_core
description: Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain
Protein sequence:
MQLNDLRSAPGARREKHRPGRGIGSGLGKTGGRGHKGQTSRSGGSIAPGFEGGQQPLHRRLPKFGFVSLKAMDRAEVRTSELNKLEGVVTLQALKDANLVGQHVQRVKVMLSGEVTRAVTLKGIAATKGARAAIEAAGGKFED

Annotated regions:
phrase: LEGVVTLQALKDANLVGQHVQRVKVMLSGEVTRAVTLKGIAATKGARAAIEAAGGKF
type: DOMAIN
name: Ribosomal_uL15/eL18
description: Large ribosomal subunit protein uL15/eL18

phrase: KVMLSGEVTRAVTLKGIAATKGARAAIEAA
type: CONSERVED_SITE
name: Ribosomal_uL15_CS
description: Large ribosomal subunit protein uL15, conserved site
Protein sequence:
MSEKIYDVPAEWAKRAFVDDAKYQEMYASSIRDPNGFWAEQAKRVDWIHAPTKIENVSYAPGNISIKWFEDGVLNAAYNCIDRHLATRADQTAIIWEGDDPADSKHITYRQLHDEVCKMANILRNRNVKKGDRVTIYLPMIPEAAYAMLACARIGAIHSVVFAGFSPDSLAQRIKDCDSKVVITADEGLRGGRKVPLKANVDAALNKVDNVDWVVVVKRTGGKIEMNPTRDLWYHEAAEMVTTECPVEHMNAEDALFILYTSGSTGQPKGVLHTTGGYLVYASMTHQYVFDYHEGDVYWCTADVGWVTGHSYILYGPLANGAVTLMFEGVPNYPDNSRFWNVIDKHKVNIFYTAPTAIRALMQGGDGPVTKTSRESLRLLGSVGEPINPEAWEWYHRVVGDNRCPIVDTWWQTETGGILITPLPGATRLKPGSATRPFFGVVPEIVDADGNTLEGATEGNLCLTRSWPGQMRTVYGDHARFEMTYFSTYKGKYFTGDGCRRDADGYYWITGRVDDVINVSGHRMGTAEVESALVAHPKVSEAAVVGYPHDIKGQGIYAYVTLMAGETPSEELRKELVGWVRKEIGPIASPDQIQFSQGLPKTRSGKIMRRILRKIAEDEPGALGDTSTLADPAVVDDLVQHRQNRKEKQA

Annotated regions:
phrase: ILYTSGSTGQP
type: CONSERVED_SITE
name: AMP-binding_CS
description: AMP-binding, conserved site

phrase: YQEMYASSIRDPNGFWAEQAKRVDWIHAPTKIENVSYAPGNISIKWFEDGVLNAAYN
type: DOMAIN
name: ACAS_N
description: Acetyl-coenzyme A synthetase, N-terminal domain

phrase: EVESALVAHPKVSEAAVVGYPHDIKGQGIYAYVTLMAGETPSEELRKELVGWVRKEIGPIASPDQIQFSQGLPKTRSG
type: DOMAIN
name: AMP-bd_C
description: AMP-binding enzyme, C-terminal domain

phrase: DRHLATRADQTAIIWEGDDPADSKHITYRQLHDEVCKMANILRNRNVKKGDRVTIYLPMIPEAAYAMLACARIGAIHSVVFAGFSPDSLAQRIKDCDSKVVITADEGLRGGRKVPLKANVDAALNKVDNVDWVVVVKRTGGKIEMNPTRDLWYHEAAEMVTTECPVEHMNAEDALFILYTSGSTGQPKGVLHTTGGYLVYASMTHQYVFDYHEGDVYWCTADVGWVTGHSYILYGPLANGAVTLMFEGVPNYPDNSRFWNVIDKHKVNIFYTAPTAIRALMQGGDGPVTKTSRESLRLLGSVGEPINPEAWEWYHRVVGDNRCPIVDTWWQTETGGILITPLPGATRLKPGSATRPFFGVVPEIVDADGNTLEGATEGNLCLT
type: DOMAIN
name: AMP-dep_synth/lig_dom
description: AMP-dependent synthetase/ligase domain
Protein sequence:
MTTPKKTAKTSGNEARELADLSEDIGIRFKYPNSERVYLQGSRDDIRVPLREIRQDDTYTAQGTEANPPIPVYDTSGVYGDPAAHIDLKQGLPHIRTAWLDERGDTEILPKLSSEYGIERAHDPKTAHLRFNQITRPRRAKAGRNVTQLHYARQGIITPEMEFVAIRERLKLDELSQKPEYAKLLKQHAGQSFGANIPTHPDQITPEFVRREIAAGRAIIPANINHPELEPMIIGRNFRVKINGNLGNSAVTSSLTEEVEKMVWSLRWGADTIMDLSTGAHIHETREWIIRNAPVPIGTVPIYQALEKTGGIAEDLTWDLFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTANRLTGIVSRGGSIMAKWCLAHHRENFLYTHFDEICEIMKAYDVSFSLGDGLRPGCIADANDESQFAELHTLGELTSKAWKHDVQVMIEGPGHVPLQRVKENMTEELQHCFEAPFYTLGPLVTDIAPGYDHITSGIGAANIGWYGTAMLCYVTPKEHLGLPDKEDVRTGIITYKLAAHAADLAKGWPGAQLRDNALSKARFEFRWRDQFRLSLDPERAESFHDETLPAEGAKIAHFCSMCGPKFCSMKITQEVRDYADKQKAQRQGMEEKAVEFVKKGAKIYS

Annotated regions:
phrase: KYPNSERVYLQGSRDDIRVPLREIRQDDTYTAQGTEANPPIPVYDTSGVYGDPAAHIDLKQGLPHIRTAWLDERGDT
type: DOMAIN
name: ThiC-associated_dom
description: ThiC-associated domain
Protein sequence:
MEKSWFNLILSKGELEYRCGLSKSMDSRLGPVENTTVNEDPTRNDTDKNIHDCSDSSSYYSKVDHLVDVKDIRNFISDDTFLIRDSNQDRYSIYFDSENQIFELNNDHSFLSELESFFYSYHNSSYMNNGSKNDEPHYHFNLYDNDTNCGWNNHINSCIDSYLRSQICIDSSILSGSDNSNDNYISNYICGEGGNSSEGKNFDIITRENGNDLTLKESSNDLDLYKDLWVQCECENCYGVNYKKSLNSKMNICEQCGYHLKMRSSDRIELSIDPGTWGPMDEDMISLDPIEFQSEEELYKDRIDFYQRKTGLTEAIQTGTGQLNGIPIAIGVMDFQFMGGSMGSVVGEKITRLIEYATNNFLPLILVCASGGARMQEGSLSLMQMAKISSALYDYQSNKKLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKRVIEQTLNKTIPEGSQAAEYLFHKGLFDPIVPRNPLKGVLSELVQLHGFFPLNQNSIK

Annotated regions:
phrase: ISLDPIEFQSEEELYKDRIDFYQRKTGLTEAIQTGTGQLNGIPIAIGVMDFQFMGGSMGSVVGEKITRLIEYATNNFLPLILVCASGGARMQEGSLSLMQMAKISSALYDYQSNKKLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKRVIEQTLNKT
type: DOMAIN
name: AcCoA_carboxyl_beta
description: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta

phrase: VQCECENCYGVNYKKSLNSKMNICEQCGYHLKMRSSDRIELSIDPGTWGPMDEDMISLDPIEFQSEEELYKDRIDFYQRKTGLTEAIQTGTGQLNGIPIAIGVMDFQFMGGSMGSVVGEKITRLIEYATNNFLPLILVCASGGARMQEGSLSLMQMAKISSALYDYQSNKKLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKRVIEQTLNKTIPEGSQAAEYLFHKGLFDPIVPRNPLKGVLSELVQLHGFFPLNQNSI
type: DOMAIN
name: COA_CT_N
description: Acetyl-coenzyme A carboxyltransferase, N-terminal
Protein sequence:
MNAPGTFTLGPGDGSARTARLTTAHGEIETPVFMPVGTQGTVKSLCPTDLQDIKARIILGNTYHLYLRPGDELVAKLGGLHRFMGWDGPILTDSGGFQVFSLSGLRRITEEGVTFASHIDGSKHLFSPEKVVSIQRNLGSDIMMVLDECVPYGADRAYTEKSLGLTTRWARRCRKAHPAGDRGQLMFGIVQGGFFKDLRAQSAEQIIEVGFDGYALGGLSVGESRAEMYDILGDAAPLLPADRPRYLMGVGAPRDLLAGMAAGIDMFDCVLPTRNARNGTLFTFQGKVNIKRAEYREDDSPLDPTCPCYACRTFSRAYLRHLYIAKELLSYRLNTLHNLTFFSIMMERARQAIREGRFAAYRAEMEALYPEGE

Annotated regions:
phrase: GDGSARTARLTTAHGEIETPVFMPVGTQGTVKSLCPTDLQDIKARIILGNTYHLYLRPGDELVAKLGGLHRFMGWDGPILTDSGGFQVFSLSGLRRITEEGVTFASHIDGSKHLFSPEKVVSIQRNLGSDIMMVLDECVPYGADRAYTEKSLGLTTRWARRCRKAHPAGDRGQLMFGIVQGGFFKDLRAQSAEQIIEVGFDGYALGGLSVGESRAEMYDILGDAAPLLPADRPRYLMGVGAPRDLLAGMAAGIDMFDCVLPTRNARNGTLFTFQGKVNIKRAEYREDDSPLDPTCPCYACRTFSRAYLRHLYIAKELLSYRLNTLHNLTFFSIMMERARQAIREGRFAAYRAEME
type: DOMAIN
name: tRNA_ribo_trans-like
description: tRNA-guanine(15) transglycosylase-like

phrase: SARTARLTTAHGEIETPVFMPVGTQGTVKSLCPTDLQDIKARIILGNTYHLYLRPGDELVAKLGGLHRFMGWDGPILTDSGGFQVFSLSGLRRITEEGVTFASHIDGSKHLFSPEKVVSIQRNLGSDIMMVLDECVPYGADRAYTEKSLGLTTRWARRCRKAHPAGDRGQLMFGIVQGGFFKDLRAQSAEQIIEVGFDGYALGGLSVGESRAEMYDILGDAAPLLPADRPRYLMGVGAPRDLLAGMAAGIDMFDCVLPTRNARNGTLFTFQGKVNIKRAEYREDDSPLDPTCPCYACRTFSRAYLRHLYIAKELLSYRLNTLHNLTFFSIMMERARQAIREGRFAAYRAEMEAL
type: DOMAIN
name: tRNA_ribo_trans-like
description: tRNA-guanine(15) transglycosylase-like
Protein sequence:
MAAPAFPPFRLRFATAATLLGMLGLAGCQTGGYQDSVPPTSGVQPLKGLAQNVSVRRNAMGAPLIESSSFHDALFSLGYVHAGDRIEQMVAMRLLAQGRLAELAGSEALDIDRLMRAANLKQSAAQQYADASPRLKRFFEVYARGVNAYLFRYRDKLPAGLASSGYRPEYWKPEDSALIFCLYAFSQSVNLQEELSALTLAQKAGSDKLAWLLPGAPDEPLAEMEVDKLKGLNLASQLPGLPALAAASQKLADLDLLGSPGSANLALGPQRSRSGKSLLASDSRAAWALSPVQINTSKYQVAGLSLPGLPIVLAGYNGKLAWSSSAVMADNQDLFLEQLRRQGSQLSYLADGKWLPARARSETYFVRGQRPVREVMYDTRHGTLLAQPENASLGLALNLPQFKGDRSLDALFDLTRAKNVERAFDSTREVTAAAVNFVFAEPEHIGWQVSGRYPNRREGQGLLPSPGWDGRYDWDGYADPMLHPYDQDPPAGWIGHANQRSLPRGYGMQLSSTWYYPERAERLAQLAGNGRHDSRSLMALQNDQVTLLANKLKQMFDAPGMAQPLKQAIDALPAGQRDKARDTLARLKAFDGRLSPVSADAALYELFLQEVARQTFLDDLGPESGPAWQAFVGNARLSFSAQADHLLGRDDSPFWDDRNTPQKEDKPAILARSLAGAMEAGIAQLGADRRTWQWGKLHQYRWPAPAYHGLGDAISRSPLAAGGDFTTLALTPFAWGSDFDTHLPASARMIVDFGQAEPLQILTSSGQSGNPASAHYRDGLDAWFKGRFMSLPLQQQNFGRAYGNQRLTLVPGR

Annotated regions:
Protein sequence:
MSTNKKVQSPKEESIAKMLICKVHIGTKNLENKMKRYVYTRAKDGVHILNLAKTYEKLQLAARIIVAINNPADVVVVSARPFGSRAVLKFAQYTGAQAIAGRWTPGMLTNQIIQKFTEPRLLIVTDPRTDAQPVKESAYANIPVIALCDSDSPLEHVDIAIPCNNKGKESIALMYWLLAQEVLYLKGTLPRSKPWNVMVDMFLWRDPEQFELKNLAIEETAPAAPHLTENQFATEAPYEEWNKKEEWNDNANEEWKNPIAAEEW

Annotated regions:
phrase: PRLLIVTDPRTDAQPVKESAYANI
type: CONSERVED_SITE
name: Ribosomal_uS2_CS
description: Small ribosomal subunit protein uS2, conserved site

phrase: IAKMLICKVHI
type: CONSERVED_SITE
name: Ribosomal_uS2_CS
description: Small ribosomal subunit protein uS2, conserved site
Protein sequence:
MASIWEETEADGLGEEVLKMSTEEIIQRTRLLDSEIKIMKSEVLRVTHELQAMRDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHEDYMEGILEVQAKKKANLQYYA

Annotated regions:
phrase: DVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELTHED
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: VKVIAATNRVDILDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: LDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETL
type: DOMAIN
name: Prot_ATP_ID_OB_2nd
description: Proteasomal ATPase, second OB domain

phrase: PPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEF
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core
Protein sequence:
MKLLENSHFEAVNSQLCVETGDAHIIGRIESYSCKMAGDDKHMFKQFCQEGQPHVLEALSPPQTGISPSRLGKSQGADEEGPLSDKCSRKTLFYLIATLNESFRPDYDFSAARAHEFSREPSLNWVVNAVNSSLVSALGDDFTSLRPNLWDAVDEEINLSECDIYSYNPDLDCDPFGEDGNLWSFNYFFYNKKLKRIVFFSCRSISGYTYTHCDAGAELDMDLEEEDDEDEPSSAAGDRPQLMCI

Annotated regions:
Protein sequence:
MSFSRPSGRTADQLRPVRIERAFTRHAEGSVLVSFGDTRVLCTASVENRVPNFLRGKGEGWVTAEYGMLPRSTHTRSDREAARGKQGGRTLEIQRLIGRALRACVDRNALGERTITLDCDVLQADGGTRTAAITGAYVALADAVNLLLKRGDIKKHPLIGAVAAVSVGIYRGEPVLDLDYPEDSDCDTDMNVVMNDGGGFIELQGTAEGHAFRRDELNALLALAEKGVGELFELQRAALAG

Annotated regions:
phrase: AVAAVSVGIYRGEPVLDLDYPEDSDCDTDMNVVMNDGGGFIELQGTAEGHAFRRDELNALLALAEK
type: DOMAIN
name: ExoRNase_PH_dom2
description: Exoribonuclease, phosphorolytic domain 2

phrase: CDVLQADGGTRTA
type: CONSERVED_SITE
name: RNase_PH_CS
description: Ribonuclease PH, conserved site

phrase: QLRPVRIERAFTRHAEGSVLVSFGDTRVLCTASVENRVPNFLRGKGEGWVTAEYGMLPRSTHTRSDREAARGKQGGRTLEIQRLIGRALRACVDRNALGERTITLDCDVLQADGGTRTAAITGAYVALAD
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1
Protein sequence:
MRVKETQMNWPNLWKWGTLILGLVIICSASDNLWVTVYYGVPVWRDANTTLFCASDAKAHETEVHNVWATHACVPTDPSPQEVRLENVTENFNMWKNNMVEQMQEDVISLWDQSLKPCVKLTPLCVTLNCTNATVNATVTNANVTQNTTNATNIENTTDEVKNCSFNMTTELRDKKQQIYALFYKLDVVQINKSSSNPSGKYRLINCNTSVIKQACPKVSFDPIPIHYCTPAGYAILKCNDKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEEEIIIRSENLTNNAKTIIVHLNTSVQINCTRPSNNTRTSITIGPGQILFYRPGDIIGDIRKAYCEVNGTEWNTVLKQVTGKLKEHFINRTIKFQPSSGGDLEITMHHFTCRGEFFYCNTTELFTCINETGEGCNDTITLPCRIKQIINMWQGVGQAMYAPPISGSINCVSNITGILLTRDGGDNKTTEEIFRPGGGNIKDNWRSELYKYKVVQIEPLGIAPTRAKRRVVEREKRAVGIGAMIFGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQFLGLWGCSGKIICTTAVPWNSTWSNKSYEEIWSKMTWIEWEREIGNYTNLIYDILTESQTQQDKNEKDLLELDKWASLWNWFDITKWLWYIQIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQTPSHHQREPDRPERIEEGGGEQGRDRSVRLVSGFLALAWDDLRSLCLFS

Annotated regions:
phrase: VQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQFLGLWGCSGKIICTTAVPWNSTWSNKSYEEIWSKMTWIEWEREIGNYTNLIYDILTESQTQQDKNEKDLLELD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQFLGLWGCSGKIICTTAVPWNSTWSNKSYEEIWSKMTWIEWEREIGNYTNLIYDILTESQTQQDKNEKDLLELDKWASLWNWFDITKWLWYIQIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQTP
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWRDANTTLFCASDAKAHETEVHNVWATHACVPTDPSPQEVRLENVTENFNMWKNNMVEQMQEDVISLWDQSLKPCVKLTPLCVTLNCTNATVNATVTNANVTQNTTNATNIENTTDEVKNCSFNMTTELRDKKQQIYALFYKLDVVQINKSSSNPSGKYRLINCNTSVIKQACPKVSFDPIPIHYCTPAGYAILKCNDKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEEEIIIRSENLTNNAKTIIVHLNTSVQINCTRPSNNTRTSITIGPGQILFYRPGDIIGDIRKAYCEVNGTEWNTVLKQVTGKLKEHFINRTIKFQPSSGGDLEITMHHFTCRGEFFYCNTTELFTCINETGEGCNDTITLPCRIKQIINMWQGVGQAMYAPPISGSINCVSNITGILLTRDGGDNKTTEEIFRPGGGNIKDNWRSELYKYKVVQIEPLGIAPTRAKRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MSRIGYKTIVIPEGVTVTRDEDVITVKGPKGELSETFSPDVAMNVNGNEINFEPTGKYDNKMCALHGTQRANLANMIEGVEKGFNKTLKLVGVGYRTQLKGSDLILNVGYSNPVDVKVPEDIDVKVPDNTTIEIAGINKQHVGDFAAKVREIRSPEPYKGKGIRYENEHITLREGKTGK

Annotated regions:
phrase: VGVGYRTQLKGSDLILNVGYSNPVDVKVPEDIDVKVPDNTTIEIAGINKQHVGDFAAKVREIRSPEPYKGKGIR
type: DOMAIN
name: Ribosomal_uL6_a/b-dom
description: Large ribosomal subunit protein uL6, alpha-beta domain

phrase: IPEGVTVTRDEDVITVKGPKGELSETFSPDVAMNVNGNEINFEPTGKYDNKMCALHGTQRANLANMIEGVEK
type: DOMAIN
name: Ribosomal_uL6_a/b-dom
description: Large ribosomal subunit protein uL6, alpha-beta domain

phrase: PEPYKGKG
type: CONSERVED_SITE
name: Ribosomal_uL6_CS
description: Large ribosomal subunit protein uL6, conserved site
Protein sequence:
MTNTILDTYSSRRKPRRIGILTSGGDAPGMNGAIRAVVRTAIQNGCEAWAIHEGYEGLIQGGAMMHPLYWEDVRGFLSRGGTLIGSVRCDRFREREGRLQAARNMVLFGIDALVVCGGDGSLTGADLFRSEWPELLNELVSTGVLTVAQVAPHQNLNIVGLLGSIDNDFSGTDATIGCYSALTRICEAVDAVFDTASSHRRGFVVEVMGRHCGWLALMAAIATGADWLFIPERPPRDGWEDDMCSIITKNRNRGKRRTIVILAEGAQDSNLDRISSSAVKDVLSKRLGLDTRVTVLGHIQRGGSPCAYDRWLSTLQGIHAVKAVLSMTPESPSPVVIIQENRIRTSSLAETVALTKEANASMHAKEFEKAATLRDPEFMEYHSAYRHLNTSDHPKMVLPEDKRMRVAIIHVGAPAAGMNPATRAVVAYCLTRGHTPIAIHNGFPGLCRHHDDTPGSVREMHWLESGDWINDGGSDIGTNAGLPLDDIETTAQCFERYKFDALFVIGGFEAFTAVSQLRKARKQYLAFRIPLVLLPASMSNNVPGTEYSLGSDTSLNTLVYFCDVVRQSASSSGHSVFVVEAQGAEYQATAAALAAGAMTVYTPERGITLQSLSNDIEYLRQQFSKDHGANRSGKLIIRNDQTSTIYSTTEIANIIKHEAKNRFDAQGVVPGHFQQGGKVSPIDRIRAFRLAVKCMEHLETFAGQSPEEIMNDENSATVISIKQSRILLLPMGGPTGVEATDTDWKRQRPKTQNWLEIQEAVDSLSGRSSLYAIPN

Annotated regions:
phrase: RIGILTSGGDAPGMNGAIRAVVRTAIQNGCEAWAIHEGYEGLIQGGAMMHPLYWEDVRGFLSRGGTLIGSVRCDRFREREGRLQAARNMVLFGIDALVVCGGDGSLTGADLFRSEWPELLNELVSTGVLTVAQVAPHQNLNIVGLLGSIDNDFSGTDATIGCYSALTRICEAVDAVFDTASSHRRGFVVEVMGRHCGWLALMAAIATGADWLFIPERPPRDGWEDDMCSIITKNRNRGKRRTIVILAEGAQDSNLDRISSSAVKDVLSKRLGLDTRVTVLGHIQRGGSPCAYDRWLSTLQGIHAVK
type: DOMAIN
name: Phosphofructokinase_dom
description: Phosphofructokinase domain

phrase: RVAIIHVGAPAAGMNPATRAVVAYCLTRGHTPIAIHNGFPGLCRHHDDTPGSVREMHWLESGDWINDGGSDIGTNAGLPLDDIETTAQCFERYKFDALFVIGGFEAFTAVSQLRKARKQYLAFRIPLVLLPASMSNNVPGTEYSLGSDTSLNTLVYFCDVVRQSASSSGHSVFVVEAQGAEYQATAAALAAGAMTVYTPERGITLQSLSNDIEYLRQQFSKDHGANRSGKLIIRNDQTSTIYSTTEIANIIKHEAKNRFDAQGVVPGHFQQGGKVSPIDRIRAFRLAVKCME
type: DOMAIN
name: Phosphofructokinase_dom
description: Phosphofructokinase domain

phrase: RVTVLGHIQRGGSPCAYD
type: CONSERVED_SITE
name: Phosphofructokinase_CS
description: Phosphofructokinase, conserved site
Protein sequence:
MIRIAIDCMGGDFGLPVTIPAAIEFARQFPDSRLLLVGLPEAIEAALAEHKAAPRDRFEIVPATEVVSMDDPVEIALRRKKDSSMRLAAQAVKDGRADACVSAGNTGAWMAISRYVLKTLDGIDRPAIATSIPNQTGRATTVLDLGANVDCTAEHLLQFAIMGTALTQAVDHRDNPTVGLLNIGEEVIKGNEVVKEAAELLRRSPLNFRGNVEGNDIFKGTVDVVVCDGFVGNVVLKSVEGLAKMLSSVIREEFQRNLVTLLAGAIAKPVLNRLRNRVDNRRYNGAALLGLRGVVIKSHGSADVYAYGFALQRAREAVVSKLQERTAQAVALITQRVQMGEAAAGEPEAAGDTV

Annotated regions:
Protein sequence:
MGGKWSKGSLGGWSKVREKMEKVXPAAEGVGAASRDLENRGALTVSNTAXTNADCAWLEAQEDEEVGFPVRPQVPLRPMTYKGALDLSHFLREKGGLEGLIYSQKRQDILDLWVYHTQGYFPDWQNYTPGPGTRFPLTFGWCFKLVPVDPEKIEEANAGENNCLLHPMSQHGXDDPEREVLMWKFDSHLAFRHMARELHPEYYKNC

Annotated regions:
Protein sequence:
MSDLYRFGISLDRELIEAFDRHIKGQGYQSRSEALRDLIRNELLRKTTAEGGLVAGAIVMTYDHHKRELVNRLIDIQHDFHDLIISTQHVHLDHENCLEVIAVKGNAPDIEKLSSALKVLVGVKHLDLSLSSAD

Annotated regions:
phrase: RFGISLDRELIEAFDRHIKGQGYQSRSEALRDLIRNEL
type: DOMAIN
name: CopG
description: Ribbon-helix-helix protein, CopG

phrase: AGAIVMTYDHHKRELVNRLIDIQHDFHDLIISTQHVHLDHENCLEVIAVKGNAPDIEKLSSALKVLVGVKHLDLS
type: DOMAIN
name: TF_NikR_Ni-bd_C
description: Transcription factor, NikR, nickel binding C-terminal
Protein sequence:
MADYLVRAIGAGGNVRAFAAVTTALTEEARRRHDTWPVATAALGRALTGTALLAATLKDPNESLTLRVAGDGPLRGILCDADEQGHVRGYVTEPHVDLEPAARGKLNVGAAVGTGMLYVTRQLALQGIYTGSSELVSGEIAEDLAYYLTRSEQTPSAVGLGVRVGPDGAVVAAGGYMVQLLPATPDADRDRLEENLGRLGSVSLAVEQGMTPEEILSVVLTGIDYQILERRDLSFPCRCSRERALGAIALLDETELSGLVEEGRGAELTCHFCNAVYRFSPEEVLQVQRGMKDKQ

Annotated regions:
Protein sequence:
MKLKSLINDKKLSIDNINIVGLXENSKEIKKNYIFFIKETKNFKSSYIDEAVNNGAKLIIYSKDCQLNIKKYNKLCYFYAVDDIDRAISKXSEKFHKVKKNKIKIYGITGTNGKSTVSNFIAQLITLQKEKAGLIGTLGNGIYPKLSQKNLTTPNIININKYISQFFNKEASAVVIEASSHGIKQNRIQGINFDTVIFTNLTHDHLDYHKNMKDYYNTKLKLFTKYKSKRKIICIDNYYGKKIYKDIKNRNKVKTVSISNSKADFYASDITYYRYGIKFKIHSNYGDKEINIKMFGEFNVINILLAVASLATNKIKYNLIINNIIKLKPIDGRMNKYYKVGYPTTFIDFAHTPDAMKQVIVSIKKHFPKNKIITIFGCGGERDAKKRKSMGEIAYKLSDHIIITNDNPRNESQKKITEDIILGIKKNKKYQVVLDRSKAIKKSLNRSXFDKVVLILGKGHEXFQIVKSKKIAYSDKSEXIKLMV

Annotated regions:
phrase: ITGTNGKSTVSNFIAQLITLQKEKAGLIGTLGNGIYPKLSQKNLTTPNIININKYISQFFNKEASAVVIEASSHGIKQNRIQGINFDTVIFTNLTHDHLDYHKNMKDYYNTKLKLFTKYKSKRKIICIDNYYGKKIYKDIKNRNKVKTVSISNSKADFYASDITYYRYGIKFKIHSNYGDKEINIKMFGEFNVINILLAVA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRMNKYYKVGYPTTFIDFAHTPDAMKQVIVSIKKHFPKNKIITIFGCGGERDAKKRKSMGEIAYKLSDHIIITNDNPRNESQKKITEDIILGIKKNKKYQVVLDRSKAIKKSLNRSXFDKVVLILGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: YGITGTNGKSTVSNFIAQLITLQ
type: CONSERVED_SITE
name: Folylpolyglutamate_synth_CS
description: Folylpolyglutamate synthetase, conserved site
Protein sequence:
MRILGIDPGLRVTGFGVIDVSGHQLAYVASGVIKTPTADLPTRLGTIYDGVSTLIREHTPDQAAIEKVFVNVNPQSTLLLGQARGAAICGLVSGGLPVAEYTALQLKQAVVGYGRATKEQMQEMVARLLSLSGRPGTDAADALGMAICHAHGGNTLNTLGGIAPALAKKGLRVRRGRLVG

Annotated regions:
phrase: GYGRATKEQMQEMVARLLSLSGRPGTDAADALGM
type: BINDING_SITE
name: X-over_junc_endoDNase_Mg_BS
description: Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site