nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MEKVFNFCAGPAMLPVDVLAQAQKELVNWNGLGTSVMEISHRSKEFIKVAEESEQDLRDLLAIPDNYKVLFCQGGARAQFAAVPLNLLGGNTKADYVDAGYWAQSAVEEAQKYCTPNVINTIIDVDGKKAVQPASEWALSDDAVYVHFCPNETIDGIEINDLPVTDKPIVADMSSTILSRKIDVSKYGVIYAGAQKNIGPAGLTIVIVRDDLLDLASQTLPSVLNYGVLADKESMFNTPPTYAWYLAGLVFKWLKSNGGIDAMETHNRKKAAVLYDYIDQSDFYRNDVHSDNRSLMNVPFQLANPELDTKFLELADEAGLKALKGHRVVGGMRASIYNAMPLEGVEALVQFMKEFEEKYV

Annotated regions:
phrase: YGVIYAGAQKNIGPAGLTI
type: BINDING_SITE
name: Aminotrans_V_PyrdxlP_BS
description: Aminotransferase class-V, pyridoxal-phosphate binding site

phrase: VFNFCAGPAMLPVDVLAQAQKELVNWNGLGTSVMEISHRSKEFIKVAEESEQDLRDLLAIPDNYKVLFCQGGARAQFAAVPLNLLGGNTKADYVDAGYWAQSAVEEAQKYCTPNVINTIIDVDGKKAVQPASEWALSDDAVYVHFCPNETIDGIEINDLPVTDKPIVADMSSTILSRKIDVSKYGVIYAGAQKNIGPAGLTIVIVRDDLLDLASQTLPSVLNYGVLADKESMFNTPPTYAWYLAGLVFKWLKSNGGIDAMETHNRKKAAVLYDYIDQSDFYRNDVHSDNRSLMNVPFQLANPELDTKFLELADEAGLKALKGHRVVGGMRASIYNAMPLEGVEA
type: DOMAIN
name: Aminotrans_V_dom
description: Aminotransferase class V domain
Protein sequence:
MVDRKRIIVGVSGGIAAYKACTVVRQLAEAGHSVRVVPTESALRFVGAATFEALSGNPVHTGVWDDVHEVPHVRIGQEADLVVVAPATADLLARAVAGRADDLLTATLLTARCPVMFAPAMHTEMWFHPATVDNVATLRRRGAVVLEPASGRLTGADSGAGRLPEAEEITTLAHLLLERADALPYDLAGVKVLVSAGGTREPIDPVRFIGNRSSGKQGYAMARVAAQRGADVTLIAGNTAGLVDPAGVHVEHIGSAAQLKDAVSKHAPDAHVLVMAAAVADFRPAHVQTSKIKKGASEPTSIELARTDDVLAGAVRARADGQLPNMRAIVGFAAETGDANGDVLFHARAKLARKGCDLLVVNAVGENRAFEVDSNDGWLLASDGTEVALEHGSKTLMASRIVDAIVAFLRNSSG

Annotated regions:
phrase: KRIIVGVSGGIAAYKACTVVRQLAEAGHSVRVVPTESALRFVGAATFEALSGNPVHTGVWDDVHEVPHVRIGQEADLVVVAPATADLLARAVAGRADDLLTATLLTARCPVMFAPAMHTEMWFHPATVDNVATLRRRGAVVLEPASGRLTGADSGAGRLPEAEE
type: DOMAIN
name: Flavoprotein
description: Flavoprotein

phrase: LAGVKVLVSAGGTREPIDPVRFIGNRSSGKQGYAMARVAAQRGADVTLIAGNTAGLVDPAGVHVEHIGSAAQLKDAVSKHAPDAHVLVMAAAVADFRPAHVQTSKIKKGASEPTSIELARTDDVLAGAVRARADGQLPNMRAIVGFAAETGDANGDVLFHARAKLARKGCDLLVVNAVGENRAFEVDSNDGW
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal
Protein sequence:
MVMEKLGDSLQGALKKLIGAGRIDERTVNEVVKDIQRALLQADVNVKLVMGMSQRIKERAMKEEPPAGMNPREHVIRIVYQELMEIIGKGAEIQLKPQTIMMVGLQGSGKTTSAAKLARYFQRKGLKAGVVAADTFRPGAYHQLKTLAEKLNVGFYGEEGNPDAVEITKNGLKALEKYDIRIVDTAGRHALEADLIEEMERIHAVAKPDHKFMVLDAGIGQQASQQAHAFNDSVGITGVIITKLDGTAKGGGALSAVSETKAPIAFIGVGETPEDFEKFEADRFISRLLGMGDLKSLMEKAEESLSEEDVNVEALMQGRFTLKDMYKQLEAMNKMGPLKQIMSMLPMGMGGMKFSDEMFQATSDKMKNYKVIMDSMTEEEMTDPRVIGGSRIKRISKGSGCSSEDVRELLKYHKTMQTALKGFRGGKFNIQKMMKKKMGM

Annotated regions:
phrase: RFTLKDMYKQLEAMNKMGPLKQIMSMLPMGMGGMKFSDEMFQATSDKMKNYKVIMDSMTEEEMTDPRVIGGSRIKRISKGSGCSSEDVRELLKYHKTMQT
type: DOMAIN
name: Signal_recog_particle_SRP54_M
description: Signal recognition particle, SRP54 subunit, M-domain

phrase: KPQTIMMVGLQGSGKTTSAAKLARYFQRKGLKAGVVAADTFRPGAYHQLKTLAEKLNVGFYGEEGNPDAVEITKNGLKALEKYDIRIVDTAGRHALEADLIEEMERIHAVAKPDHKFMVLDAGIGQQASQQAHAFNDSVGITGVIITKLDGTAKGGGALSAVSETKAPIAFI
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: QTIMMVGLQGSGKTTSAAKLARYFQRKGLKAGVVAADTFRPGAYHQLKTLAEKLNVGFYGEEGNPDAVEITKNGLKALEKYDIRIVDTAGRHALEADLIEEMERIHAVAKPDHKFMVLDAGIGQQASQQAHAFNDSVGITGVIITKLDGTAKGGGALSAVSETKAPIAFIGVGETPEDFEKFEADRFISRLL
type: DOMAIN
name: SRP54_GTPase_dom
description: Signal recognition particle, SRP54 subunit, GTPase domain

phrase: PIAFIGVGETPED
type: DOMAIN
name: SRP54_GTPase_dom
description: Signal recognition particle, SRP54 subunit, GTPase domain

phrase: LGDSLQGALKKLIGAGRIDERTVNEVVKDIQRALLQADVNVKLVMGMSQRIKERAMKEEPPAGMNPREHVIRIVYQE
type: DOMAIN
name: Signal_recog_particl_SRP54_hlx
description: Signal recognition particle SRP54, helical bundle

phrase: PQTIMMVGLQGSGKTTSAAKLARYFQRKGLKAGVVAADTFRPGAYHQLKTLAEKLNVGFYGEEGNPDAVEITKNGLKALEKYDIRIVDTAGRHALEADLIEEMERIHAVAKPDHKFMVLDAGIGQQASQQAHAFNDSVGITGVIITKLDGTAKGGGALSAVSETKAPIAFIGVGETPEDFEKFEADRFISRLL
type: DOMAIN
name: SRP54_GTPase_dom
description: Signal recognition particle, SRP54 subunit, GTPase domain

phrase: MEKLGDSLQGALKKLIGAGRIDERTVNEVVKDIQRALLQADVNVKLVMGMSQRIKERAMKEEPPAGMNPREHVIRIVYQELMEI
type: DOMAIN
name: Signal_recog_particl_SRP54_hlx
description: Signal recognition particle SRP54, helical bundle
Protein sequence:
MTQKNTLLLIDGYGFVFRAYYAQQPLTSPKGEPVGALYGFTSMLLKLLSDFKPKHVAVVFDSGGKNFRHQIYPDYKANRPPPPEDLIIQLPLVRDVASNLNFPILEKNGYEADDIIATFATKTAALGAHVVIISSDKDLLQLMTENIKIYDPLKGKYITEDDVVKKFGTTSDKLREVMALIGDRSDNIPGVPSIGPKTASSLITQFGSVENIFNSLDQVSSVKQRETLQNSREAALISWQLIGLNSNVDLDFQLNNLEWSPPNSDKLTGFLQEYGFRSLYKRVENLLDIKINDHKEIADSKVTEIKELNNANELADFAKEATKIGIFGIYLLQHKGANLAFILSLQNQSYIIKISNTSHDLFSYNTKSNNNWFSDIIFNLLTDKSIKKITYSLKPLLKFYANQSHDITAIEDLELMQYALSAGLSQKNLFKEVLKETWIENIIIESAKIVINFIALYKQTIWELKDNKTFRLYSNIDLPICFILDKMEKVGITVDANYLKQLSAEFGTEILKLEEEIFALSGTKFNIGSPKQLGEILFEKMQLPFGKASAKASSYSTGAEILEKLSEHGYNIADLLLRWRQLTKLKNTYTDSLPKQIDNITHRVHTTFLQTSTTTGRLSSQEPNLQNVPIRSSEGNQIRKAFIAEEGYKLISADYSQIELRILSHIANIDALKQAFINKDDIHTQTACQIFNLQKHELTSEHRRKAKAINFGIIYGISAFGLAKQLNVTNGEASEYIKKYFAEYKGVQEYMEQTKAFASSNGYVTNCFGRKCFVPLIHDKKLKQFAERAAINAPIQGTNTDIIKIAMINLDQEIEKRKLKTRLVLQIHDELLFEAPIDEVEIITPIIKKIMENSTNMAVPIITEIRAGNNWMEIH

Annotated regions:
phrase: SDKLREVMALIGDRSDNIPGVPSIGPKTASSLITQ
type: CONSERVED_SITE
name: HhH2
description: Helix-hairpin-helix motif, class 2

phrase: GNQIRKAFIAEEGYKLISADYSQIELRILSHIANIDALKQAFINKDDIHTQTACQIFNLQKHELTSEHRRKAKAINFGIIYGISAFGLAKQLNVTNGEASEYIKKYFAEYKGVQEYMEQTKAFASSNGYVTNCFGRKCFVPLIHDKKLKQFAERAAINAPIQGTNTDIIKIAMINLDQEIEKRKLKTRLVLQIHDELLFEAPID
type: DOMAIN
name: DNA-dir_DNA_pol_A_palm_dom
description: DNA-directed DNA polymerase, family A, palm domain

phrase: SDKLREVMALIGDRSDNIPGVPSIGPKTASSLITQFGSVENIFNSLDQVSSVKQRETLQNSREAALISWQLIGLNSNVDLDFQLNNLEWSPPN
type: DOMAIN
name: DNA_polI_H3TH
description: DNA polymerase I-like, H3TH domain

phrase: NYLKQLSAEFGTEILKLEEEIFALSGTKFNIGSPKQLGEILFEKMQLPFGKASAKASSYSTGAEILEKLSEHGYNIADLLLRWRQLTKLKNTYTDSLPKQIDNITHRVHTTFLQTSTTTGRLSSQEPNLQNVPIRSSEGNQIRKAFIAEEGYKLISADYSQIELRILSHIANIDALKQAFINKDDIHTQTACQIFNLQKHELTSEHRRKAKAINFGIIYGISAFGLAKQLNVTNGEASEYIKKYFAEYKGVQEYMEQTKAFASSNGYVTNCFGRKCFVPLIHDKKLKQFAERAAINAPIQGTNTDIIKIAMINLDQEIEKRKLKTRLVLQIHDELLFEAPIDEVEIITPIIKKIMENSTNMAVPIITEIRAGNNWM
type: DOMAIN
name: DNA-dir_DNA_pol_A_palm_dom
description: DNA-directed DNA polymerase, family A, palm domain

phrase: TLLLIDGYGFVFRAYYAQQPLTSPKGEPVGALYGFTSMLLKLLSDFKPKHVAVVFDSGGKNFRHQIYPDYKANRPPPPEDLIIQLPLVRDVASNLNFPILEKNGYEADDIIATFATKTAALGAHVVIISSDKDLLQLMTENIKIYDPLKGKYITEDDVVKKF
type: DOMAIN
name: 5-3_exonucl_a-hlix_arch_N
description: 5'-3' exonuclease, alpha-helical arch, N-terminal

phrase: DKLREVMALIGDRSDNIPGVPSIGPKTASSLITQFGSVENIFNSLDQVSSVKQRETLQNSREAALISWQLIG
type: DOMAIN
name: DNA_polI_H3TH
description: DNA polymerase I-like, H3TH domain

phrase: QKNTLLLIDGYGFVFRAYYAQQPLTSPKGEPVGALYGFTSMLLKLLSDFKPKHVAVVFDSGGKNFRHQIYPDYKANRPPPPEDLIIQLPLVRDVASNLNFPILEKNGYEADDIIATFATKTAALGAHVVIISSDKDLLQLMTENIKIYDPLKGKYITEDDVVKKFGTTSDKLREVMALIGDRSDNIPGVPSIGPKTASSLITQFGSVENIFNSLDQVSSVKQRETLQNSREAALISWQLIGLNSNVDLDFQLNNLEW
type: DOMAIN
name: 5-3_exonuclease
description: 5'-3' exonuclease

phrase: RRKAKAINFGIIYGISAFG
type: CONSERVED_SITE
name: DNA-dir_DNA_pol_A_CS
description: DNA-directed DNA polymerase, family A, conserved site
Protein sequence:
MVSLHPLLDNGITPGSDSFPGGTLKCLCPSFPVEITLTTNVAHNHACGCSKCWKPAGALFSIVGVVPRDELSVTANGDKLAIVDESAVIQRYACKECGTHLYRRIEKEHPFYGLDFVHAELSEEEGWQEPQFAAFVSSVIEQGFDPAKIGEVRARFRELGLETYDSLSPPLMDAIAAWTGRKNGKYDLHSWLDCERRKGGGGGGQPGGVVCRL

Annotated regions:
phrase: FPGGTLKCLCPSFPVEITLTTNVAHNHACGCSKCWKPAGALFSIVGVVPRDELSVTANGDKLAIVDESAVIQRYACKECGTHLYRRIEKEHPFYGLDFVHAELSEEEGWQEPQFAAFVSSVIEQGFDPAKIGEVRARFRELGLETY
type: DOMAIN
name: CENP-V/GFA
description: CENP-V/GFA domain

phrase: KCLCPSFPVEITLTTNVAHNHACGCSKCWKPAGALFSIVGVVPRDELSVTANGDKLAIVDESAVIQRYACKECGTHLYRRIEKEHPFYGLDFVHAELSEEEGWQEPQFAAF
type: DOMAIN
name: CENP-V/GFA
description: CENP-V/GFA domain
Protein sequence:
MDYTIEHVLTRKIAGFHLVGPWEKTVPQGFEQLSLWVDNFHIQPQAWLAVYYDNPQQVAPEKLRADTVVEVPADFTLPENSVGVILTDLPGGQYAVARARVENNDFGTPWLAFFTRLHQDVRYQMAARPCFEIYLNDGKRDGYWDIDMYIPVQTSGE

Annotated regions:
phrase: MDYTIEHVLTRKIAGFHLVGPWEKTVPQGFEQLSLWVDNFHIQPQAWLAVYYDNPQQVAPEKLRADTVVEVPADFTLPENSVGVILTDLPGGQYAVARARVENNDFGTPWLAFFTRLHQDVRYQMAARPCFEIYLNDGKRDGYWDIDMYIP
type: DOMAIN
name: GyrI-like
description: GyrI-like small molecule binding domain

phrase: MDYTIEHVLTRKIAGFHLVGPWEKTVPQGFEQLSLWVDNFHIQPQAWLAVYYDNPQQVAPEKLRADTVVEVPADFTLPENSVGVILTDLPGGQYAVARARVENNDFGTPWLAFFTRLHQDVRYQMAARPCFEIYLNDGKRDGYWDIDMYIPV
type: DOMAIN
name: AraC_E-bd
description: Bacterial transcription activator, effector binding
Protein sequence:
MRLENKKILLGMTGGIACYKVAYLCRKLKSEGADVTVVMTEAAKSFITPTTMQALSGHPVFSELLDPNMSDSMSHIHLSRDCDLVLIAPCTANFIAKLAHGIADDLLSSICLASNKSIAIVPSMNSYMWTNRATQKNYFEITSNGIFVWGPDSGLQACGEDGYGRMLEPEQITEEVVAFFKPKIMEGLRVLITAGPTQEDIDPVRYLGNRSSGKTGYEIAKSAYEHGAEVHLISGPTCLDIPYGVSSTQVSTAVEMHKEVIQRAKDYDIFISVAAVADWHLPYPSEQKIKKNDGVDTWKPNWEFQKNPDILAEVASIPDGPWCVGFAAETENLEEYGSIKRERKSIPLLVGNLAQYSMGKDTTTFLLFDSDGIEKFETLPKSEAADKLITAIHKRFNKNA

Annotated regions:
phrase: KKILLGMTGGIACYKVAYLCRKLKSEGADVTVVMTEAAKSFITPTTMQALSGHPVFSELLDPNMSDSMSHIHLSRDCDLVLIAPCTANFIAKLAHGIADDLLSSICLASNKSIAIVPSMNSYMWTNRATQKNYFEITSNGIFVWGPDSGLQACGEDGYGRMLEPEQITEEVV
type: DOMAIN
name: Flavoprotein
description: Flavoprotein

phrase: MEGLRVLITAGPTQEDIDPVRYLGNRSSGKTGYEIAKSAYEHGAEVHLISGPTCLDIPYGVSSTQVSTAVEMHKEVIQRAKDYDIFISVAAVADWHLPYPSEQKIKKNDGVDTWKPNWEFQKNPDILAEVASIPDGPWCVGFAAETENLEEYGSIKRERKSIPLLVGNLAQYSMGKDTTTFL
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal
Protein sequence:
MDYEIRQAEKRNIAGFHMVGPWEKTVKQGFEQLMMWVDGNQVVPLEWIAVYYDNPDEVPAEKLRCDTVVSVPDNFTIPKNSEGVILTEIAGGQYATAVARVENHDFATPWYQFFNSLLQDNHYQIAAKPCFEVYLNNGTEDGYWDIEMYVPVQSK

Annotated regions:
phrase: MDYEIRQAEKRNIAGFHMVGPWEKTVKQGFEQLMMWVDGNQVVPLEWIAVYYDNPDEVPAEKLRCDTVVSVPDNFTIPKNSEGVILTEIAGGQYATAVARVENHDFATPWYQFFNSLLQDNHYQIAAKPCFEVYLNNGTEDGYWDIEMYVPV
type: DOMAIN
name: AraC_E-bd
description: Bacterial transcription activator, effector binding

phrase: MDYEIRQAEKRNIAGFHMVGPWEKTVKQGFEQLMMWVDGNQVVPLEWIAVYYDNPDEVPAEKLRCDTVVSVPDNFTIPKNSEGVILTEIAGGQYATAVARVENHDFATPWYQFFNSLLQDNHYQIAAKPCFEVYLNNGTEDGYWDIEMYVP
type: DOMAIN
name: GyrI-like
description: GyrI-like small molecule binding domain
Protein sequence:
MSVTTQEKDLSYKVKDLSQAEWGRQEIILAEKEMPGLMALRQEYKGKKPLAGARIAGSLHMTIQTAVLIETLTELGAEVRWSSCNIFSTQDHAAAAIAKAGIPVFAWKGETEEEYWWCIEQTIFFGDKGPNMILDDGGDLTAYIHEKYPKLLSEIRGISEETTTGVKSLYKLLKKGELKVPAFNVNDSVTKSKFDNLYGCRESLADGIKRATDVMLAGKVALVCGFGDVGKGSAASLRNFGARVIVTEIDPICALQASMEGYQVLRVEDIIEQVDIVVTATGNDDIITLEHMKAMKDGAILCNIGHFDTEIQMSRLNNEKGVTKKEIKPQVDKYTFPDGKSIIVLAEGRLVNLGCATGHPSFVMSCSFTNQVLAQIELYNNKYELGVYTLPKHLDEKVAALHLEQLGVRLTKLNQKQADYLGVPINGPFKPDHYRY

Annotated regions:
phrase: GKVALVCGFGDVGKGSA
type: CONSERVED_SITE
name: S-Ado-L-homoCys_hydrolase_CS
description: S-adenosyl-L-homocysteine hydrolase, conserved site

phrase: NLYGCRESLADGIKRATDVMLAGKVALVCGFGDVGKGSAASLRNFGARVIVTEIDPICALQASMEGYQVLRVEDIIEQVDIVVTATGNDDIITLEHMKAMKDGAILCNIGHFDTEIQMSRLNNEKGVTKKEIKPQVDKYTFPDGKSIIVLAEGRLVNLGCAT
type: DOMAIN
name: Ado_hCys_hydrolase_NAD-bd
description: S-adenosyl-L-homocysteine hydrolase, NAD binding domain

phrase: SCNIFSTQDHAAAA
type: CONSERVED_SITE
name: S-Ado-L-homoCys_hydrolase_CS
description: S-adenosyl-L-homocysteine hydrolase, conserved site

phrase: NLYGCRESLADGIKRATDVMLAGKVALVCGFGDVGKGSAASLRNFGARVIVTEIDPICALQASMEGYQVLRVEDIIEQVDIVVTATGNDDIITLEHMKAMKDGAILCNIGHFDTEIQMSRLNNEKGVTKKEIKPQVDKYTFPDGKSIIVLAEGRLVNLGCAT
type: DOMAIN
name: Ado_hCys_hydrolase_NAD-bd
description: S-adenosyl-L-homocysteine hydrolase, NAD binding domain
Protein sequence:
MSGLIPQPFIDDLLNRTDLVELIDGYVPLKKRGNSHIACCPFHNEKTPSFNVVAKKQFYHCFGCGASGNAISFVMNYLNQGFTDAVETLRRAWVKCPRDGTGEKHKSSLNLYNLMSEVSQYYQKKLKYNGQVAIDYLRNRGLSGEIAKRYHLGYAPEGWHNLEKAFPNNQRELLSTGMLIKSDEGKIYDRYRNRIMFPIHDRNGRVIGFGGRVLDKDQKPKYLNSPETVLFQKSRELYGLHQVLSQQKNPDSIIVVEGYMDVIALAQHGIFNVVATLGTATSTFHIQLLAKHTKHLIFCFDGDAAGKQAAWRALESSLPHLNAGLDAGFIFLPNEHDPDSLVRNEGKNGFLELLQQATPLHRFFFDTLSKDINLSNPAGKTQLINAVKPYLQKMVEGSYKQLLIDDLSRLTHIESHRLTNLITDKSESKPEVQAAISRSPLRIAIALLLQNPEIYSIAIQQINPALLHEQEHHILLKLLQQLKDKPNANTATLIEFWRNSSYFELIVKLAAWDHQVPEQELTKEFIDVLLFLQKQNREILIRQYIEKSRKTGLTEAERLSLQNLLKERHGQAEIEK

Annotated regions:
phrase: RIAIALLLQNPEIYSIAIQQINPALLHEQEHHILLKLLQQLKDKPNANTATLIEFWRNSSYFELIVKLAAWDHQVPEQELTKEFIDVLLFLQKQNREILIRQYIEKSRKTGLTEAERLSLQN
type: DOMAIN
name: DNA_primase_DnaG_DnaB-bd_dom
description: DNA primase DnaG, DnaB-binding domain

phrase: IPQPFIDDLLNRTDLVELIDGYVPLKKRGNSHIACCPFHNEKTPSFNVVAKKQFYHCFGCGASGNAISFVMNYLNQGFTDAVETLRRAWVKCPRDGTGEKHKSSLNLYNLMSEVSQYYQKKLKYNGQVAIDYLRNRGLSGEIAKRYHLGYAPEGWHNLEKAFPNNQRELLSTGMLIKSDEGKIYDRYRNRIMFPIHDRNGRVIGFGGRVLDKDQKPKYLNSPETVLFQKSRELYGLHQVLSQQKNPDSIIVVEGYMDVIALAQHGIFNVVATLGTATSTFHIQLLAKHTKHLIFCFDGDAAGKQAAWRALESSLPHLNAGLDAGFIFLPNEHDPDSLVRNEGKNGFLELLQQATPLHRFFFDTLSKDINLSNPAGKTQLINAVKPYLQKMVEGSYKQLLIDDLS
type: DOMAIN
name: DNA_primase_DnaG
description: DNA primase, DnaG

phrase: PLRIAIALLLQNPEIYSIAIQQINPALLHEQEHHILLKLLQQLKDKPNANTATLIEFWRNSSYFELIVKLAAWDHQVPEQELTKEFIDVLLFLQKQNREILIRQYIEKSRKTGLTEAERLSLQNL
type: DOMAIN
name: DNA_primase_DnaG_DnaB-bd_dom
description: DNA primase DnaG, DnaB-binding domain

phrase: DSIIVVEGYMDVIALAQHGIFNVVATLGTATSTFHIQLLAKHTKHLIFCFDGDAAGKQAAWRALESSLPHL
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: DSIIVVEGYMDVIALAQHGIFNVVATLGTATSTFHIQLLAKHTKHLIFCFDGDAAGKQAAWRALESSLPHLNAGLDAGFIFL
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: YYQKKLKYNGQVAIDYLRNRGLSGEIAKRYHLGYAPEGWHNLEKAFPNNQRELLSTGMLIKSDEGKIYDRYRNRIMFPIHDRNGRVIGFGGRVLDKDQKPKYLNSPETVLFQKSRELYGLHQ
type: DOMAIN
name: DNAG_N
description: DNA primase DNAG, catalytic core, N-terminal

phrase: HIACCPFHNEKTPSFNVVAKKQFYHCFGCGASGNAISFVMNYLNQGFTDAVETL
type: DOMAIN
name: Znf_CHC2
description: Zinc finger, CHC2-type

phrase: FFFDTLSKDINLSNPAGKTQLINAVKPYLQKMVEGSYKQLLIDDLSRLTHI
type: DOMAIN
name: DNA_primase_DnaB-bd
description: DNA primase, DnaB-helicase binding domain

phrase: DSIIVVEGYMDVIALAQHGIFNVVATLGTATSTFHIQLLAKHTKHLIFCFDGDAAGKQAAWRALESSLPHLNAGLDAGFIF
type: DOMAIN
name: TOPRIM_DnaG_bac
description: Bacterial DnaG primase, TOPRIM domain

phrase: PQPFIDDLLNRTDLVELIDGYVPLKKRGNSHIACCPFHNEKTPSFNVVAKKQFYHCFGCGASGNAISFVMNYLNQGFTDAVETLR
type: DOMAIN
name: Znf_CHC2
description: Zinc finger, CHC2-type
Protein sequence:
MSKPADHIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPYIDEAKRLRAQHMKEHPDYKYRPRRKPKNLLKKDRYVFPLPYLGDTDHLKGLPVSATDSLLGSSEKARAFLPPTSAPYSFLDPSQFSSSAIQKMTEMPHTLATSTLPYASSLGYQNGAFGSLGCPSQHTHTHPSPTNPGYVVPCNCTAWSASSLQPPVAYILFPGMTKSGIDPYSSAHAAAM

Annotated regions:
phrase: IKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPYIDEAKRLRAQHMKEHPDY
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain

phrase: IKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPYIDEAKRLRAQHMKEHPDY
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain

phrase: HIKRPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSESEKRPYIDEAKRLRAQHMKEHPDYK
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain
Protein sequence:
MSLSIGMVAGEPSGDLLAGRIIGGLRAGAPDVHCAGIGGPQMQAQGFEAWHPMHALTVFGYIDALKRIPSLLSIYGQTKQRMLAERPAAFVGIDAPDFNLRLELQLRQAGIPTVHFVGPSIWAWRYERIHKIRAAVSHMLVLFPFEEEIYQKEGIPVTYVGHPLAGVIPMRPDRAAARLRLNLDVGERVLAILPGSRSSEIRTLAPRFLQAAQLLQARDPALCCVVPMVNPQRRAEFEQILAQYPVQGLRCITAEDVQGNGATPVAWSVMEAADAVLVASGTATLETALYKRPMVISYVLTPWMRRIMAWKSGQQRPYLPWVGLPNVLLKDFAVPELLQDDATPEKLAEAAWTALTDKDNAARIEARFTAMHEELLRDTPALAAKAILEVAHGAG

Annotated regions:
Protein sequence:
MARQQTKKNYSLRKLKTGTASVAVALTVLGAGFANQTEVRAEGVNATTSLTEKAKYDALKDENTGLRGDQTKLVKKLEEEQEKSKNLEKEKQKLENQALNFQDVIETQEKEKEDLKTTLAKATKENEISEASRKGLSRDLEASRAAKKELEAKHQKLEAENKKLTEANQVSEASRKGLSNDLEASRAAKKELEAKYQKLETDHQALEAKHQKLEADLPKFQRPSRKGLSRDLEASREANKKVTSELTQAKAQLSALEESKKLSEKEKAELQAKLDAQGKALKEQLAKQTEELAKLRAEKAAGSKTPATKPANKERSGRAAQTATRPSQNKGMRSQLPSTGEAANPFFTAAAATVMVSAGMLALKRKEEN

Annotated regions:
phrase: KGMRSQLPSTGEAANPFFTAAAATVMVSAGMLALKRKEE
type: DOMAIN
name: LPXTG_anchor
description: LPXTG cell wall anchor domain

phrase: MARQQTKKNYSLRKLKTGTASVAVALTVLGAGFANQ
type: DOMAIN
name: YSIRK_signal_dom
description: YSIRK Gram-positive signal peptide

phrase: AKLDAQGKALKEQLAKQTEELAKLRA
type: REPEAT
name: SMDRR
description: Streptococcal M protein, D repeats

phrase: QKLEADLPKFQRPSRKGLSRDLEASREANKKVTSE
type: REPEAT
name: SMCR
description: Streptococcal M proteins C repeat

phrase: AAKKELEAKHQKLEAENKKL
type: REPEAT
name: M_repeat
description: M protein repeat

phrase: AAKKELEAKYQKLETDHQAL
type: REPEAT
name: M_repeat
description: M protein repeat

phrase: KGMRSQLPSTGEAAN
type: DOMAIN
name: M_anchor
description: M protein-type anchor domain

phrase: FFTAAAATVMVSAGMLALKR
type: DOMAIN
name: M_anchor
description: M protein-type anchor domain

phrase: TKKNYSLRKLKTGTASVAVALTV
type: DOMAIN
name: YSIRK_signal_dom
description: YSIRK Gram-positive signal peptide

phrase: KKLTEANQVSEASRKGLSNDLEASRAAKKELEAK
type: REPEAT
name: SMCR
description: Streptococcal M proteins C repeat

phrase: AKATKENEISEASRKGLSRDLEASRAAKKELEAK
type: REPEAT
name: SMCR
description: Streptococcal M proteins C repeat

phrase: LPSTGEAANPFFTAAAATVMVSAGMLALKRKEE
type: DOMAIN
name: LPXTG_anchor
description: LPXTG cell wall anchor domain
Protein sequence:
MKEKIVLAYSGGLDTSVAVQWLIDKGYDVVACCLDVGEGKDLDEVYQKALDMGAIECYIIDATEEFSDEYVSYAIKGNLMYENTYPVVSALSRPLISKKLVEIAEKTDAVGIAHGCTGKGNDQVRFEVAIKALNPELKVFAPVRAWGWSREEEIDYAIQHNIPVPINHDSPYSIDQNLWGRANECGILEDPYAAPPADAFDLTREIEDTPDTPDEIVIHFEKGLPVSIDDKAFPLDELILYLNDLAGKHGIGRIDHVENRLVGIKSREIYETPGAEVILKAHKALETITLTKDVAHFKPVIEKQFAEQTYNGLWFSPLTDSLKLFIDSTQEHVTGDVRVKLFKGNATVNGRRSPYSLYNEKLATYTKEDAFNQEAAVGFIEIYGLPTEVNSMLHGGYSNEQ

Annotated regions:
phrase: YSIDQNLWGRANECGILEDPYAAPPADAFDLTREIEDTPDTPDEIVIHFEKGLPVSIDDKAFPLDELILYLNDLAGKHGIGRIDHVENRLVGIKSREIYETPGAEVILKAHKALETITLTKDVAHFKPVIEKQFAEQTYNGLWFSPLTDSLKLFIDSTQEHVTGDVRVKLFKGNATVNGRRSPYSLYNEKLATYTKEDAFNQEAAVGFIEIYGLPTE
type: DOMAIN
name: Arginosuc_syn_C
description: Arginosuccinate synthase C-terminal domain

phrase: KIVLAYSGGLDTSVAVQWLIDKGYDVVACCLDVGEGKDLDEVYQKALDMGAIECYIIDATEEFSDEYVSYAIKGNLMYENTYPVVSALSRPLISKKLVEIAEKTDAVGIAHGCTGKGNDQVRFEVAIKALNPELKVFAPVRAWGWSREEEIDYAIQHNI
type: DOMAIN
name: Arginosuc_syn_N
description: Arginosuccinate synthase-like, N-terminal domain

phrase: GCTGKGNDQVR
type: CONSERVED_SITE
name: Arginosuc_synth_CS
description: Argininosuccinate synthase, conserved site

phrase: AYSGGLDT
type: CONSERVED_SITE
name: Arginosuc_synth_CS
description: Argininosuccinate synthase, conserved site
Protein sequence:
MAKTILAARKHIKKQVVDGIAHIHASFNNTIVTITDRQGNTLGWATAGNSGFRGSRKSTPFAAQVAAERCAEAVKDYGIKNLEVMVKGPGPGRESTVRALNAAGFRITNITDVTPIPHNGCRPPKKRRV

Annotated regions:
phrase: VRALNAAGFRITNITDVTPIPH
type: CONSERVED_SITE
name: Ribosomal_uS11_CS
description: Small ribosomal subunit protein uS11, conserved site
Protein sequence:
MREILHIQGGQCGNQIGSKFWEVICDEHGVDPTGRYKGTAAESDLQLERINVYFNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNLVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKVREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPLPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTGLKMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDPVAEYQQYQDATADDEEEYDDEAADDHHQYES

Annotated regions:
phrase: GGGTGS
type: CONSERVED_SITE
name: Tubulin_CS
description: Tubulin, conserved site

phrase: MRE
type: BINDING_SITE
name: Beta-tubulin_BS
description: Beta tubulin, autoregulation binding site

phrase: PRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTGLKMASTFVGNSTSIQEMFRRV
type: DOMAIN
name: Tubulin/FtsZ_2-layer-sand-dom
description: Tubulin/FtsZ, 2-layer sandwich domain

phrase: INVYFNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNLVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKVREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFP
type: DOMAIN
name: Tubulin_FtsZ_GTPase
description: Tubulin/FtsZ, GTPase domain

phrase: EILHIQGGQCGNQIGSKFWEVICDEHGVDPTGRYKGTAAESDLQLERINVYFNEASGGRYVPRAVLMDLEPGTMDSIRSGPYGQIFRPDNLVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKVREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDI
type: DOMAIN
name: Tubulin_FtsZ_GTPase
description: Tubulin/FtsZ, GTPase domain

phrase: LNSDLRKLAVNLIPLPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTGLKMASTFVGNSTSIQEMFRRVS
type: DOMAIN
name: Tubulin/FtsZ_2-layer-sand-dom
description: Tubulin/FtsZ, 2-layer sandwich domain
Protein sequence:
MSFASETKKELTNLEMKECCEKSELSALLRMNGSLSFSNRRLSIDIQTENAAIARRIYTLLKKGYDVTVELLVRKKMRLKKNNVYIVRLVEKSREILADLHIVRDDFSFIRNISQELIEKKCCKRSYLRGAFLAGGSVNNPETSSYHLEIFSLYKEHNDSICELMNGFDLNSKTLERRKGYITYLKEAEKITEFLNIIGAHNALLRFEDIRIVRDMRNSVNRLVNCETANLNKTIGAALRQIENIRYIDETVGLDILPDKLREIAQLRRDYQDVTLKELGEMVSGGKISKSGINHRLRKIDEIAEKLRAGETVAKK

Annotated regions:
phrase: ECCEKSELSALLRMNGSLSFSNRRLSIDIQTENAAIARRIYTLLKKGYDVTVELLVRKKMRLKKNNVYIVRLVEKSREILADLHI
type: DOMAIN
name: Sporu_reg_WhiA_N_dom
description: Sporulation transcription regulator WhiA, N-terminal domain

phrase: VNRLVNCETANLNKTIGAALRQIENIRYIDETVGLDILPDKLREIAQLRRDYQDVTLKELGEMVSGGKISKSGINHRLRKIDEI
type: DOMAIN
name: Sporulation_regulator_WhiA_C
description: Sporulation regulator WhiA, C-terminal

phrase: RSYLRGAFLAGGSVNNPETSSYHLEIFSLYKEHNDSICELMNGFDLNSKTLERRKGYITYLKEAEKITEFLNIIGAHNALLRFEDIRIVRDM
type: DOMAIN
name: WhiA_LAGLIDADG_dom
description: WhiA, LAGLIDADG-like domain
Protein sequence:
MSTCGRKALTLLSSVFAVCGLGLLGIAVSTDYWLYLEEGIILPQNQSTEVKMSLHSGLWRVCFLAGEERGRCFTIEYVMPMNSQMTSESTVNVLKMIRSATPFPLVSLFFMFIGFILSNIGHIRPHRTILAFVSGIFFILSGLSLVVGLVLYISSINDEMLNRTKDAETYFNYKYGWSFAFAAISFLLTESAGVMSVYLFMKRYTAEDMYRPHPGFYRPRLSNCSDYSGQFLHPDAWIRGRSPSDISSDASLQMNSNYPALLKCPDYDQMSSSPC

Annotated regions:
Protein sequence:
SVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVPGEESQFIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFNAVRALRLEDLRIPPAYTKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIFKSQSETGEIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGXHFRVLAKALRMSGGDHIHSGTVVGKLEGEREITLGFVDLLRDDFVEKDRSRGIFFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGXPWGNXPGAVANRVALEACVQARNEGRDLAREGNEIIREASKWSPELAAACEVWKEIKFEFEPVDTI

Annotated regions:
phrase: YYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVPGEESQFIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFNAVRALRLEDLRIPPA
type: DOMAIN
name: RuBisCO_lsu_fd_N
description: Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal

phrase: GIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEAIFKSQSETGEIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGXHFRVLAKALRMSGGDHIHSGTVVGKLEGEREITLGFVDLLRDDFVEKDRSRGIFFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGXPWGNXPGAVANRVALEACVQARNEGRDLAREGNEIIREASKWSPELAAACEV
type: DOMAIN
name: RuBisCO_lsu_C
description: Ribulose bisphosphate carboxylase, large subunit, C-terminal

phrase: GLDFTKDD
type: ACTIVE_SITE
name: RuBisCo_large_chain_AS
description: Ribulose bisphosphate carboxylase, large chain, active site
Protein sequence:
MRVLGIDPGLTRCGVGVVEGVPGRPCTLIAYHVVRTDPDDELPLRLLHLDRSLTALVAEHRPDGVAVERVFSQHNVRTVMGTAQASGVAVLAGARAGIPVQTYTPSEVKAAVTGSGQADKAQMTAMVTRLLRLSEPPRPADAADALALAICHVWRGGTRSRLAAAADRARRGGGR

Annotated regions:
phrase: GSGQADKAQMTAMVTRLLRLSEPPRPADAADALAL
type: BINDING_SITE
name: X-over_junc_endoDNase_Mg_BS
description: Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site
Protein sequence:
MEPQNTTQVSMFVLLGFSQTQELQKFLFLLFLLVYVTTIVGNLLIMVTVTFDCRLHTPMYFLLRNLALIDLCYSTVTSPKMLVDFLHETKTISYQGCMAQIFFFHLLGGGTVFFLSVMAYDRYIAISQPLRYVTIMNTQLCVGLVVAAWVGGFVHSIVQLALILPLPFCGPNILDNFYCDVPQVLRLACTDTSLLEFLMISNSGLLVIIWFLLLLISYTVILVMLRSHSGKARRKAASTCTTHIIVVSMIFIPCIYIYTWPFTPFLMDKAVSISYTVMTPMLNPMIYTLRNQDMKAAMRRLGKCLVICRE

Annotated regions:
phrase: GNLLIMVTVTFDCRLHTPMYFLLRNLALIDLCYSTVTSPKMLVDFLHETKTISYQGCMAQIFFFHLLGGGTVFFLSVMAYDRYIAISQPLRYVTIMNTQLCVGLVVAAWVGGFVHSIVQLALILPLPFCGPNILDNFYCDVPQVLRLACTDTSLLEFLMISNSGLLVIIWFLLLLISYTVILVMLRSHSGKARRKAASTCTTHIIVVSMIFIPCIYIYTWPFTPFLMDKAVSISYTVMTPMLNPMI
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM