nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MAQAGVVGEVTQVLCAAGGALELPELRRRLRMGLSADALERLLRQRGRFVVAVRAGGAAAAPERVVLAASPLRLCRAHQGSKPGCVGLCAQLHLCRFMVYGACKFLRAGKNCRNSHSLTTEHNLSVLRTHGVDHLSYNELCQLLFQNDPWLLPEICQHYNKGDGPHGSCAFQKQCIKLHICQYFLQGECKFGTSCKRSHDFSNSENLEKLEKLGMSSDLVSRLPTIYRNAHDIKNKSSAPSRVPPLFVPQGTSERKDSSGSVSPNTLSQEEGDQICLYHIRKSCSFQDKCHRVHFHLPYRWQFLDRGKWEDLDNMELIEEAYCNPKIERILCSESASTFHSHCLNFNAMTYGATQARRLSTASSVTKPPHFILTTDWIWYWSDEFGSWQEYGRQGTVHPVTTVSSSDVEKAYLAYCTPGSDGQAATLKFQAGKHNYELDFKAFVQKNLVYGTTKKVCRRPKYVSPQDVTTMQTCNTKFPGPKSIPDYWDSSALPDPGFQKITLSSSSEEYQKVWNLFNRTLPFYFVQKIERVQNLALWEVYQWQKGQMQKQNGGKAVDERQLFHGTSAIFVDAICQQNFDWRVCGVHGTSYGKGSYFARDAAYSHHYSKSDTQTHTMFLARVLVGEFVRGNASFVRPPAKEGWSNAFYDSCVNSVSDPSIFVIFEKHQVYPEYVIQYTTSSKPSVTPSILLALGSLFSSRQ

Annotated regions:
phrase: EEGDQICLYHIRKSCSFQDKCHRVHF
type: DOMAIN
name: Znf_CCCH
description: Zinc finger, CCCH-type

phrase: KLHICQYFLQGECKFGTSCKRSHD
type: DOMAIN
name: Znf_CCCH
description: Zinc finger, CCCH-type

phrase: AQLHLCRFMVYGACKFLRAGKNCRNSHS
type: DOMAIN
name: Znf_CCCH
description: Zinc finger, CCCH-type

phrase: SVTKPPHFILTTDWIWYWSDEFGSWQEYGRQGTVHPVTTVSSSDVEKAYLAYCTPGSDGQAATLKFQAGKHNYELDFKAFVQKNLVYGTTKKVC
type: DOMAIN
name: WWE_dom
description: WWE domain

phrase: AGVVGEVTQVLCAAGGALELPELRRRLRMGLSADALERLLRQRGRFVVAVRAGGAAAAPERVVL
type: DOMAIN
name: WH_PARP12
description: PARP12, winged helix domain

phrase: IPDYWDSSALPDPGFQKITLSSSSEEYQKVWNLFNRTLPFYFVQKIERVQNLALWEVYQWQKGQMQKQNGGKAVDERQLFHGTSAIFVDAICQQNFDWRVCGVHGTSYGKGSYFARDAAYSHHYSKSDTQTHTMFLARVLVGEFVRGNASFVRPPAKEGWSNAFYDSCVNSVSDPSIFVIFEKHQVYPEYVIQYTTSSKPSVTPSILLALGSLF
type: DOMAIN
name: Poly(ADP-ribose)pol_cat_dom
description: Poly(ADP-ribose) polymerase, catalytic domain

phrase: ICQYFLQGECKFGTSCKRSH
type: DOMAIN
name: Znf_CCCH
description: Zinc finger, CCCH-type

phrase: EEGDQICLYHIRKSCSFQDKCHRVHFH
type: DOMAIN
name: Znf_CCCH
description: Zinc finger, CCCH-type

phrase: WIWYWSDEFGSWQEYGRQGTVHPVTTVSSSDVEKAYLAYCTPGSDGQAATLKFQAGKHNYELDFKAFVQKNLVYGTTKKVC
type: DOMAIN
name: WWE_dom
description: WWE domain

phrase: SFQDKCHRVHFHLPYRWQFLDRGKWEDLDNMELIEEAYCNPKIERILCSESASTFHSHCLNFNAMTYGATQARRLS
type: DOMAIN
name: WWE_dom
description: WWE domain

phrase: SEEYQKVWNLFNRTLPFYFVQKIERVQNLALWEVYQWQKGQMQKQNGGKAVDERQLFHGTSAIFVDAICQQNFDWRVCGVHGTSYGKGSYFARDAAYSHHYSKSDTQTHTMFLARVLVGEFVRGNASFVRPPAKEGWSNAFYDSCVNSVSDPSIFVIFEKHQVYPEYVIQY
type: DOMAIN
name: Poly(ADP-ribose)pol_cat_dom
description: Poly(ADP-ribose) polymerase, catalytic domain

phrase: ICQYFLQGECKFGTSCKRSHDF
type: DOMAIN
name: Znf_CCCH
description: Zinc finger, CCCH-type
Protein sequence:
MDKFTTLEGVAAPLKIINVDTDMIIPKQYLKTIKRTGLGRGLFSEQRYRDDGSENPDFVLNKSAYRNARILVAGDNFGCGSSREHAPWALLDFGIRCVISTSFGDIFYNNCFKNGILPIRVTQADLDKLFDDAERGANATLTIDLANQEIRGPDGGTVKFEIDAFRKHCLLNGLDDIGLTMEKKAAIDSYEDKAKRERAWA

Annotated regions:
phrase: MDKFTTLEGVAAPLKIINVDTDMIIPKQYLKTIKRTGLGRGLFSEQRYRDDGSENPDFVLNKSAYRNARILVAGDNFGCGSSREHAPWALLDFGIRCVISTSFGDIFYNNCFKNGILPIRVT
type: DOMAIN
name: AconitaseA/IPMdHydase_ssu_swvl
description: Aconitase A/isopropylmalate dehydratase small subunit, swivel domain

phrase: NVDTDMIIPKQYLKTIKRTGLGRGLFSEQRYRDDGSENPDFVLNKSAYRNARILVAGDNFGCGSSREHAPWALLDFGIRCVISTSFGDIFYNNCFKNGILPIRVTQADLDKLFDDAERGANATLTID
type: DOMAIN
name: IPMI_Swivel
description: 3-isopropylmalate dehydratase, swivel domain
Protein sequence:
MIDPWGSAKLEYQDLIENFGVRPFSEVLDEVPEPSWLMRRGIIFGHRDYERIISAMKKGEDFAVVTGMMPSGRMHIGHKMIVDQLRWYDRMGAEIFIPIADMEAYSARGVDFEDSRRIAIEEYIAGYIALGLDLEKDNIHVYLQSENLMVEDLAYVLAGKVNFNELRAIYGFTGSTSMAHMYAPIIQVSDILHPQLDELGGPRPVIVPVGPDQDPHIRLTRDIAARFRDRYGFILPSSTYHRFMGGLTGGKMSSNRPKSAIFLSDTPEEAEAKIRNAKTGGRETLKEQRELGGVPEECIIYETLLYHMSGSDSRLEEIYESCRNGTLMCGECKNNTAEFIRKFFEELSVKREKALPAARRILEG

Annotated regions:
Protein sequence:
MIKVGIVGGTGYTGVELLRILASHPQAEVTVITSRAEAGRQVSELFPNLRGHYDLAFSEPSKEVLLECDVIFFATPHGVAQAMMAELIEGGARVIDLSADFRIRDIATWEKWYGQKHGCPDLVASAVYGLPEVNREKIKSAQLIACPGCYPTSIQLGFLPLLEKGLIDVSSLIANSASGTTGAGKQASVPNLFSEASDSFKAYGAAGHRHLPEIEQGLVDIGGEHANGLSLTFVPHLLPTIRGIHSTLYAKLKGDAGDLQALYEQRYANEPFVDVLPKGDFPQTRTVKSTNMCRISVIEPQERGTVVIMSVIDNLTKGASGQGVQNMNIMFGLDENMGMSSPAILP

Annotated regions:
phrase: IACPGCYPTSIQLGFL
type: ACTIVE_SITE
name: AGPR_AS
description: N-acetyl-gamma-glutamyl-phosphate reductase, active site

phrase: KVGIVGGTGYTGVELLRILASHPQAEVTVITSRAEAGRQVSELFPNLRGHYDLAFSEPSKEVLLECDVIFFATPHGVAQAMMAELIEGGARVIDLSADFRIRDIATWEKWYGQKHGCPDLVASAVYGLPEVNREKIKS
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: KVGIVGGTGYTGVELLRILASHPQAEVTVITSRAEAGRQVSELFPNLRGHYDLAFSEPSKEVLLECDVIFFATPHGVAQAMMAELIEGGARVIDLSADFRIRDIATWEKWYGQKHGCPDLVASAVYGLPEVNREKIKS
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MNLLRNALIGGIVLVSFLLIIRWNEFQERKFEETQLQQSSANNSERVAPSIPSEQPQAPNGEEVPDAPASDSKDAVEFTANADNDRQIHISTDTLDLVIDTNGGDIVRLALPQYYAMLHEKDNPFVLLNNNDTSTYIAQSGLVGPNGTDGKNGRPRFSAASSDYTLEPGKDTLVVDLKYQQESAIITKRFTFHRDSYLIDLEYLIENTGDTNWVGNLYGQIKRDDHNPAQAVGVGMQPFLGAAITTPETNYKKLKFDELAKEKLEVSNTGGWVAMVQHYFMSAWVPDQDKDQKYVLRKSRNANMYFLSFTTLTSTTVAPGTTGSIKAQYYAGPKHIRVLEKIAPHLDLTIDYSWLWFIAKPLFYALDFIHGLVGNWGLAIILLTCCIKLVFFYPSAMSYRSMAKMRKVQPLMNELKERYGDDRQRMSAELMKLYKKEKVNPLGGCLPILLQMPVFIALYWMIMESVELRHAPFFLWIHDLSVRDPYFVLPLIMGVTMWIQQKLNPTPADPMQAKVMQLMPFFFTALFMMFPAGLVLYWVVNNTLSITQQYIITRQIEKAD

Annotated regions:
phrase: GLAIILLTCCIKLVFFYPSAMSYRSMAKMRKVQPLMNELKERYGDDRQRMSAELMKLYKKEKVNPLGGCLPILLQMPVFIALYWMIMESVELRHAPFFLWIHDLSVRDPYFVLPLIMGVTMWIQQKLNPTPADPMQAKVMQLMPFFFTALFMMFPAGLVLYWVVNNTLSITQQYIIT
type: DOMAIN
name: YidC_ALB_C
description: Membrane insertase YidC/ALB, C-terminal

phrase: RQIHISTDTLDLVIDTNGGDIVRLALPQYYAMLHEKDNPFVLLNNNDTSTYIAQSGLVGPNGTDGKNGRPRFSAASSDYTLEPGKDTLVVDLKYQQESAIITKRFTFHRDSYLIDLEYLIENTGDTNWVGNLYGQIKRDDHNPAQAVGVGMQPFLGAAITTPETNYKKLKFDELAKEKLEVSNTGGWVAMVQHYFMSAWVPDQDKDQKYVLRKSRNANMYFLSFTTLTSTTVAPGTTGSIKAQYYAGPKHIRVLEKIAPHLDLTID
type: DOMAIN
name: Membr_insert_YidC_N
description: Membrane insertase YidC, N-terminal

phrase: QIHISTDTLDLVIDTNGGDIVRLALPQYYAMLHEKDNPFVLLNNNDTSTYIAQSGLVGPNGTDGKNGRPRFSAASSDYTLEPGKDTLVVDLKYQQESAIITKRFTFHRDSYLIDLEYLIENTGDTNWVGNLYGQIKRDDHNPAQAVGVGMQPFLGAAITTPETNYKKLKFDELAKEKLEVSNTGGWVAMVQHYFMSAWVPDQDKDQKYVLRKSRNANMYFLSFTTLTSTTVAPGTTGSIKAQYYAGPKHIRVLEKIAPHLDLTIDYSWLWFIAKPLF
type: DOMAIN
name: Membr_insert_YidC_N
description: Membrane insertase YidC, N-terminal

phrase: IVLVSFLLIIRWNEFQERKFEETQLQQSSANNSERVAPSIPSEQPQAPNGEEVPDAPASDSKDAVEFTANADNDRQIHISTDTLDLVIDTNGGDIVRLALPQYYAMLHEKDNPFVLLNNNDTSTYIAQSGLVGPNGTDGKNGRPRFSAASSDYTLEPGKDTLVVDLKYQQESAIITKRFTFHRDSYLIDLEYLIENTGDTNWVGNLYGQIKRDDHNPAQAVGVGMQPFLGAAITTPETNYKKLKFDELAKEKLEVSNTGGWVAMVQHYFMSAWVPDQDKDQKYVLRKSRNANMYFLSFTTLTSTTVAPGTTGSIKAQYYAGPKHIRVLEKIAPHLDLTIDYSWLWFIAKPLFYALDFIHGLV
type: DOMAIN
name: Membr_insert_YidC_N
description: Membrane insertase YidC, N-terminal

phrase: WGLAIILLTCCIKLVFFYPSAMSYRSMAKMRKVQPLMNELKERYGDDRQRMSAELMKLYKKEKVNPLGGCLPILLQMPVFIALYWMIMESVELRHAPFFLWIHDLSVRDPYFVLPLIMGVTMWIQQKLNPTPADPMQAKVMQLMPFFFTALFMMFPAGLVLYWVVNNTLSITQQYIIT
type: DOMAIN
name: YidC/Oxa/ALB_C
description: Membrane insertase YidC/Oxa/ALB, C-terminal

phrase: NWGLAIILLTCCIKLVFFYPSAMSYRSMAKMRKVQPLMNELKERYGDDRQRMSAELMKLYKKEKVNPLGGCLPILLQMPVFIALYWMIMESVELRHAPFFLWIHDLSVRDPYFVLPLIMGVTMWIQQKLNPTPADPMQAKVMQLMPFFFTALFMMFPAGLVLYWVVNNTLSITQQYIIT
type: DOMAIN
name: YidC/Oxa/ALB_C
description: Membrane insertase YidC/Oxa/ALB, C-terminal
Protein sequence:
MRVGVLTGGGDCPGLNAVIRAIVRRGVRDHGFEFVGYRDGWKGPLDDLTMPLGIEQCRGILPRGGTILGSSRTNPLKVDGGVDRIRENLVRDGVDALVVIGGEDTLGVATHLADLGVAVVGVPKTIDNDLSGTDFTFGFDTAVNIATEAIDRLHTTAESHHRVLVVEVMGRHAGWIALHAGMAGGASAVLIPEQPFDIEAICAHVETRFQTQYAPIIVVSEGAVPVEGGAMTVHPGEVDAFGHVRLGGIGDRLAVEIERRTGKEARTVVLGHIQRGGTPTAFDRWLATRFGLQAVDAVAEGDFGTMMALQGTKIVRLPLIEGTGALKLVSPEEYAEAQVFFG

Annotated regions:
phrase: RTVVLGHIQRGGTPTAFD
type: CONSERVED_SITE
name: Phosphofructokinase_CS
description: Phosphofructokinase, conserved site

phrase: RVGVLTGGGDCPGLNAVIRAIVRRGVRDHGFEFVGYRDGWKGPLDDLTMPLGIEQCRGILPRGGTILGSSRTNPLKVDGGVDRIRENLVRDGVDALVVIGGEDTLGVATHLADLGVAVVGVPKTIDNDLSGTDFTFGFDTAVNIATEAIDRLHTTAESHHRVLVVEVMGRHAGWIALHAGMAGGASAVLIPEQPFDIEAICAHVETRFQTQYAPIIVVSEGAVPVEGGAMTVHPGEVDAFGHVRLGGIGDRLAVEIERRTGKEARTVVLGHIQRGGTPTAFDRWLATRFGLQAVDA
type: DOMAIN
name: Phosphofructokinase_dom
description: Phosphofructokinase domain
Protein sequence:
MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARIVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLKAQQTEKAVA

Annotated regions:
phrase: HDSYLINL
type: BINDING_SITE
name: AP_endonuc_F2_Zn_BS
description: AP endonuclease 2, zinc binding site

phrase: MHLNDAKSTFGSRVDR
type: BINDING_SITE
name: AP_endonuc_F2_Zn_BS
description: AP endonuclease 2, zinc binding site

phrase: GVCIDTC
type: BINDING_SITE
name: AP_endonuc_F2_Zn_BS
description: AP endonuclease 2, zinc binding site

phrase: RAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLGLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARIVGFKYLRGMHLNDAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEEIAWLK
type: DOMAIN
name: Xyl_isomerase-like_TIM-brl
description: Xylose isomerase-like, TIM barrel domain
Protein sequence:
MSMKKTAAVEDKKISLDKESYIKSVQERIAKIPISNYRNFSIVAHVDHGKSTLSDRLLELTGVIQPGDANKQVLDKLDVERERGITVKAQTCSMFYVDPKSKEEYLLHLVDTPGHVDFRAEVSRSYASCGGALLLIDASQGVQAQTVANFYLAYSMGLKLIPVINKIDLDAADIPRAMDQVETTFELPREDCIPVSAKTGLNIENIIPAIIRDIPGPRGSVDKPLKALLVDSWHDPYVGVVMLIHVVDGVVKKGMKLLSAHSEKRYDVKEVGIMYPDKMPMDCVKAGQVAYIIPGMRNPREAMIGDTFYQYGKHEGLEPLPGFEEPKPMVFVGAFPADGGEFKVMNDHMENLVLNDRSVTLEKETSNALGLGWRLGFLGSLHASVFKERLENEYGAKIILTAPTVPYKLIFKDGEESIVTNPDEFPGADFRNHNIEMLMEPYVNALMTIPDEYIGTVMSLCENNRGIQKELEYLTTGQVLLKYEIPLAQLVEDFFGKLKGCTKGYASLDYEDAGYKKSDIVKMELCVNGEPQDALTQVMHRSQVLSRGKEYVTRFKEYLKFQLFEVAIQAKVNNKVVARETIKAKRKDVTQKLHAADISRRKKLLSRQKEGKKQMKATGKISINQEAYQAFLRRAD

Annotated regions:
phrase: NFSIVAHVDHGKS
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: ERGITVKA
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: HLVDTPGHVD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: LIPVINKID
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: GVVMLIHVVDGVVKKGMKLLSAHSEKRYDVKEVGIMYPDKMPMDCVKAGQVAYIIPGMRNPREAMIGDT
type: DOMAIN
name: EFTu-like_2
description: Translation elongation factor EFTu-like, domain 2

phrase: EPYVNALMTIPDEYIGTVMSLCENNRGIQKELEYLTTGQVLLKYEIPLAQLVEDFFGKLKGCTKGYASLDYEDAGYKKS
type: DOMAIN
name: LepA_IV
description: Elongation factor 4, domain IV

phrase: SNYRNFSIVAHVDHGKSTLSDRLLELTGVIQPGDANKQVLDKLDVERERGITVKAQTCSMFYVDPKSKEEYLLHLVDTPGHVDFRAEVSRSYASCGGALLLIDASQGVQAQTVANFYLAYSMGLKLIPVINKIDLDAADIPRAMDQVETTFELPREDCIPVSAKTGLNIENIIPAIIRDIPGP
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: VNGEPQDALTQVMHRSQVLSRGKEYVTRFKEYLKFQLFEVAIQAKVNNKVVARETIKAKRKDVTQKLHAADISRRKKLLSRQKEGKKQMKATGKISINQEAYQAF
type: DOMAIN
name: LepA_CTD
description: GTP-binding protein LepA, C-terminal

phrase: DKLDVERERGITVKA
type: CONSERVED_SITE
name: G_TR_CS
description: Tr-type G domain, conserved site

phrase: YRNFSIVAHVDHGKSTLSDRLLELTGVIQPGDANKQVLDKLDVERERGITVKAQTCSMFYVDPKSKEEYLLHLVDTPGHVDFRAEVSRSYASCGGALLLIDASQGVQAQTVANFYLAYSMGLKLIPVINKIDLDAADIPRAMDQVETTFELPREDCIPVSAKTGLNIENI
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: LMEPYVNALMTIPDEYIGTVMSLCENNRGIQKELEYLTTGQVLLKYEIPLAQLVEDFFGKLKGCTKGYASLDYEDAGYKKSDIVK
type: DOMAIN
name: EFG_V-like
description: Elongation factor EFG, domain V-like

phrase: NYRNFSIVAHVDHGKSTLSDRLLELTGVIQPGDANKQVLDKLDVERERGITVKAQTCSMFYVDPKSKEEYLLHLVDTPGHVDFRAEVSRSYASCGGALLLIDASQGVQAQTVANFYLAYSMGLKLIPVINKIDLDAADIPRAMDQVETTFELPREDCIPVSAKTGLNIENIIPAIIRDI
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain
Protein sequence:
MNHPQPITMPIPGHIDPVPVPRDLKPRVDGRIDLLGLSRDDLRMALETAQLEPRQAKLRAKQLWHWIYNRGATDFAVMTDIAKDMRGWLDQRFVVSRPEVVEAQVSTDGTRKWLLRSDDGQDYEMVFIPDADRGTLCVSSQVGCTLNCRFCHTGTMKLVRNLTPAEIVGQVMLARDALGEWPSQPEGRMLTNIVMMGMGEPLYNFDNVRDALKLVMDGDGLALSKRRITLSTAGVVPMMARAGEEIGVNLAVSLHAITKEVRDEIVPLNRKYGIEDLLQACADYPGANNARRITFEYVMLKDKNDRDEDALELVRLIRKYRLPAKVNLIPFNPWPGAPYECSDPDRVARFSDLIFKAGISAPVRTPRGRDIMAACGQLKSAAEKKSRAELDRMAAEKQAALG

Annotated regions:
phrase: SSQVGCTLNCRFCHTGTMKLVRNLTPAEIVGQVMLARDALGEWPSQPEGRMLTNIVMMGMGEPLYNFDNVRDALKLVMDGDGLALSKRRITLSTAGVVPMMARAGEEIGVNLAVSLHAITKEVRDEIVPLNRKYGIEDLLQACADYPGANNARRITFEYVMLKDKNDRDEDALEL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: DADRGTLCVSSQVGCTLNCRFCHTGTMKLVRNLTPAEIVGQVMLARDALGEWPSQPEGRMLTNIVMMGMGEPLYNFDNVRDALKLVMDGDGLALSKRRITLSTAGVVPMMARAGEEIGVNLAVSLHAITKEVRDEIVPLNRKYGIEDLLQACADYPGANNARRITFEYVMLKDKNDRDEDALELVRLIRKYRLPAKVNLIPFNPWPGAPYECSDPDRVARFSDLIFKAGISAPVRTPRGR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: IDLLGLSRDDLRMALETAQLEPRQAKLRAKQLWHWIYNRGATDFAVMTDIAKDMRGWLDQRF
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MSGPYDEASEEITDSFWEVGNYKRTVKRIDDGHRLCNDLMSCVQERAKIEKAYAQQLTDWAKRWRQLIEKGPQYGSLERAWGAMMTEADKVSELHQEVKNSLLNEDLEKVKNWQKDAYHKQIMGGFKETKEAEDGFRKAQKPWAKKMKELEAAKKAYHLACKEEKLAMTREMNSKTEQSVTPEQQKKLVDKVDKCRQDVQKTQEKYEKVLEDVGKTTPQYMEGMEQVFEQCQQFEEKRLVFLKEVLLDIKRHLNLAENSSYIHVYRELEQAIRGADAQEDLRWFRSTSGPGMPMNWPQFEEWNPDLPHTAAKKEKQPKKAEGAALSNATGAVESTSQAGDRGSVSSYDRGQAYATEWSDDESGNPFGGNEANGGANPFEDDAKGVRVRALYDYDGQEQDELSFKAGDELTKLGEEDEQGWCRGRLDSGQLGLYPANYVEAI

Annotated regions:
phrase: VRVRALYDYD
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: DELSFKAGDELTKLG
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: QLGLYPANYVEA
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: AKGVRVRALYDYDGQEQDELSFKAGDELTKLGEEDEQGWCRGRLDSGQLGLYPANYVEA
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: VRVRALYDYDGQEQDELSFKAGDELTKLGEEDEQGWCRGRLDSGQLGLYPANYVEA
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: FWEVGNYKRTVKRIDDGHRLCNDLMSCVQERAKIEKAYAQQLTDWAKRWRQLIEKGPQYGSLERAWGAMMTEADKVSELHQEVKNSLLNEDLEKVKNWQKDAYHKQIMGGFKETKEAEDGFRKAQKPWAKKMKELEAAKKAYHLACKEEKLAMTREMNSKTEQSVTPEQQKKLVDKVDKCRQDVQKTQEKYEKVLEDVGKTTPQYMEGMEQVFEQCQQFEEKRLVFLKEVLLDIKRHLNLAENSSYIHVYRELEQAI
type: DOMAIN
name: PACSIN1_F-BAR
description: PACSIN1, F-BAR

phrase: EEITDSFWEVGNYKRTVKRIDDGHRLCNDLMSCVQERAKIEKAYAQQLTDWAKRWRQLIEKGPQYGSLERAWGAMMTEADKVSELHQEVKNSLLNEDLEKVKNWQKDAYHKQIMGGFKETKEAEDGFRKAQKPWAKKMKELEAAKKAYHLACKEEKLAMTREMNSKTEQSVTPEQQKKLVDKVDKCRQDVQKTQEKYEKVLEDVGKTTPQYMEGMEQVFEQCQQFEEKRLVFLKEVLLDIKRHLNLAENSSYIHVYRELEQAIRGADAQE
type: DOMAIN
name: F_BAR
description: F-BAR domain

phrase: VRVRALYDYDGQEQDELSFKAGDELTKLGEEDEQGWCRGRLDSGQLGLYPANYVE
type: DOMAIN
name: PACSIN1/PACSIN2_SH3
description: PACSIN1/PACSIN2, SH3 domain

phrase: DSFWEVGNYKRTVKRIDDGHRLCNDLMSCVQERAKIEKAYAQQLTDWAKRWRQLIEKGPQYGSLERAWGAMMTEADKVSELHQEVKNS
type: DOMAIN
name: FCH_dom
description: FCH domain

phrase: YKRTVKRIDDGHRLCNDLMSCVQERAKIEKAYAQQLTDWAKRWRQLIEKGPQYGSLERAWGAMMTEADKVSELH
type: DOMAIN
name: FCH_dom
description: FCH domain

phrase: ALYDYDGQEQDELSFKAGDELTKLGEEDEQGWCRGRLDSGQLGLYPANYV
type: DOMAIN
name: SH3_domain
description: SH3 domain
Protein sequence:
MNRLKEKFQKEITPALVSKFNYKSVMEVPKIEKIVINTGVGDAVSNSKALDNAVEELTQIAGQKPVVTRAKKSIAGFRLREGMPIGAKVTLRGEQMYEFFDKLVSVSLPRVRDFRGVSKKSFDGRGNYTLGVKEQLIFPEIDYDKVSKVRGMDIVIVTTAKTDEEARELLTQFGMPFQK

Annotated regions:
phrase: SVMEVPKIEKIVINTGVGDAVSNSKALDNAVEELTQIAGQKPVVTRAKKSIAGFRL
type: DOMAIN
name: Ribosomal_uL5_N
description: Large ribosomal subunit protein uL5, N-terminal

phrase: LTQIAGQKPVVTRAKK
type: CONSERVED_SITE
name: Ribosomal_uL5_CS
description: Large ribosomal subunit protein uL5, conserved site

phrase: PIGAKVTLRGEQMYEFFDKLVSVSLPRVRDFRGVSKKSFDGRGNYTLGVKEQLIFPEIDYDKVSKVRGMDIVIVTTAKTDEEARELLTQFGMP
type: DOMAIN
name: Ribosomal_uL5_C
description: Large ribosomal subunit protein uL5, C-terminal
Protein sequence:
MKKQRNLRSMAAQAIEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLEWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAVAIKRPQLKGLINGVLRQFQRQQDELLAEFNASDARYLHPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRVNRTHHSRDSWLALLDEAGMKGFPHADYPDAVQLETPAPVHALPGFEEGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVLAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWSHLKSGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIKK

Annotated regions:
phrase: FDRILLDAPCS
type: CONSERVED_SITE
name: RsmB/NOL1/NOP2-like_CS
description: RsmB/NOL1/NOP2-like, conserved site

phrase: MTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVLAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWSHLKSGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAK
type: DOMAIN
name: MeTrfase_RsmB-F_NOP2_cat
description: SAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic core

phrase: HPSWLLKRLQKAYPEQWQSIVEANNQRPPMWLRVNRTHHSRDSWLALLDEAGMKGFPHADYPDAVQLETPAPV
type: DOMAIN
name: RsmB-like_ferredoxin
description: Ribosomal RNA small subunit methyltransferase B-like, ferredoxin-like domain

phrase: IVEANNQRPPMWLRVNRTHHSRDSWLALLDEAGMKGFPHADYPDAVQLETPAPVHALPGFEEGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVLAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWSHLKSGGTLVYATCSVLPEENSLQIKAFLQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIK
type: DOMAIN
name: MeTrfase_RsmB-F_NOP2_dom
description: SAM-dependent methyltransferase RsmB-F/NOP2-type domain

phrase: RNLRSMAAQAIEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLEWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAVAIKRPQLKGLINGVLRQFQRQ
type: DOMAIN
name: RsmB-like_N
description: Ribosomal RNA small subunit methyltransferase B-like, N-terminal domain

phrase: NLRSMAAQAIEQVVEQGQSLSNILPPLQQKVSDKDKALLQELCFGVLRTLSQLEWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAETVEGAVAIKRPQLKGLINGVLRQFQ
type: DOMAIN
name: NusB_RsmB_TIM44
description: NusB/RsmB/TIM44
Protein sequence:
MIFMILTKFEKARIIGARALQIAMGAPVIIDISPDIIDPIDIAMIEFENNVIPITIKRNQ

Annotated regions:
phrase: TKFEKARIIGARAL
type: CONSERVED_SITE
name: DNA-dir_RNA_polK_14-18kDa_CS
description: DNA-directed RNA polymerase, 14-18kDa subunit, conserved site
Protein sequence:
MNDYIVVKCGGSMLEQLNDVFFDCIKKLQQQYKVVIVHGGGPEIDAKLKDCNINVEKRDGLRVTPKEVMDVVQMVLCGSTNKKFVMNLQKHNLLAVGCSGCDGKLLQVQPVSEEIGYVGEVSYVETALLKGLINMNYIPVIAPIGIHDNEIYNINADTAAAGIAAALSAKELILITDVDGILHEGKLVKKTDESEIATLIEKGVITGGMIPKVQAALASLKMGVQKISIVNRTKDFTEDTGECIGTTVTRGVSIV

Annotated regions:
phrase: YIVVKCGGSMLEQLNDVFFDCIKKLQQQYKVVIVHGGGPEIDAKLKDCNINVEKRDGLRVTPKEVMDVVQMVLCGSTNKKFVMNLQKHNLLAVGCSGCDGKLLQVQPVSEEIGYVGEVSYVETALLKGLINMNYIPVIAPIGIHDNEIYNINADTAAAGIAAALSAKELILITDVDGILHEGKLVKKTDESEIATLIEKGVITGGMIPKVQAALASLKMGVQKISIV
type: DOMAIN
name: Asp/Glu/Uridylate_kinase
description: Aspartate/glutamate/uridylate kinase
Protein sequence:
MKYLIGIDDHDSYKFGCTTHFSVILTSYLYKNHNTILLDLPYLVRLNPNIPWKTRGNASIKLIVDFNGTKKELADIIFSYSVKYVKNVSLALEHGRRPGIAIIEYDKYKSLFEKLYDFYIKGILDIIPIDYAKKFAEKNDIEIRGDRGIIGSIAALGMSGDYTYELITYRKKENWLKKRMINEDSVKRVDEETFPLTFANYDYINDSPLITPHGNDPILYGIRGTSIEHLIKAMELIESNEDINFFAVFKTNQNTDIHFQKVGNRFYQEIKKVIQIKNIKILEGGDVMIRTTDDDILFVYKETGELNSAAKLLKEGDEIVAYGAIKPSITYGKIIELERFEILKLNDLQLINPKCPICGGPTKSLGKNKGYKCKKCKYIINTANKSMKNIIRNLSLGIYQTRAYRHLTRPIFLTLENNNQSFHEERKFLDMYRSELYKLDYHL

Annotated regions:
phrase: DRGIIGSIAALGMSGDYTYELITYRKKENWLKKRMINEDSVKRVDEETFPLTFANYDYINDSPLITPHGNDPILYGIRGTSIEHLIKAMELIESNEDINFFAVFKTNQNTDI
type: DOMAIN
name: TiaS_FLD
description: TiaS, FLD domain

phrase: IGIDDHDSYKFGCTTHFSVILTSYLYKNHNTILLDLPYLVRLNPNIPWKTRGNASIKLIVDFNGTKKELADIIFSYSVKYVKNVSLALEHGRRPGIAIIEYDKYKSLFEKLYDFYIKGILDIIPIDYAKKFAEKNDI
type: DOMAIN
name: TiaS-like_TCKD
description: TiaS-like, TCKD domain

phrase: NPKCPICGGPTKSLGKNKGYKCKKCKYIINTANKSMKNIIR
type: DOMAIN
name: Zn_ribbon_TiaS
description: TiaS, C-terminal zinc ribbon domain
Protein sequence:
MNVNQGTVGSDPVILATAGYDHTVRFWQAHSGICTRTVQHQDSQVNSLEVTPDRSMIAAAGYQHIRMYDLNSNNPNPVINYDGVSKNITSVGFHEDGRWMYTGGEDCMARIWDLRSRNLQCQRIFQVNAPINCVCLHPNQAELIVGDQSGVIHIWDLKTDHNEQLIPEPDVSVNSVHIDPDASYMAAVNSSGNCYVWNLAGGMGDEVTQLIPKTKIPAHKRYSLRCKFSPDSTLLATCSADQTCKIWRTSNFSLMTELSIKSNNPGETSRGWMWDCAFSGDSQYIVTASSDNLARLWCVETGEIKREYSGHQKAVVCLAFNDSVLG

Annotated regions:
phrase: IPAHKRYSLRCKFSPDSTLLATCSADQTCKIWRTSNFSLMT
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: YDGVSKNITSVGFHEDGRWMYTGGEDCMARIWDLRSRNLQC
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: MYTGGEDCMARIWD
type: CONSERVED_SITE
name: WD40_repeat_CS
description: WD40 repeat, conserved site

phrase: AFSGDSQYIVTASSDNLARLWCVETGEIKR
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: NPNPVINYDGVSKNITSVGFHEDGRWMYTGGEDCMARIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: QLIPKTKIPAHKRYSLRCKFSPDSTLLATCSADQTCKIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: TELSIKSNNPGETSRGWMWDCAFSGDSQYIVTASSDNLARLW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: SGICTRTVQHQDSQVNSLEVTPDRSMIAAAGYQHIRMY
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: TDHNEQLIPEPDVSVNSVHIDPDASYMAAVNSSGNCYVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: NLQCQRIFQVNAPINCVCLHPNQAELIVGDQSGVIHIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: KIPAHKRYSLRCKFSPDSTLLATCSADQTCKI
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: CTRTVQHQDSQVNSLEVTPDRSMIAAAGYQHIRMY
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: NYDGVSKNITSVGFHEDGRWMYTGGEDCMARIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: GWMWDCAFSGDSQYIVTASSDNLARL
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: SVNSVHIDPDASYMAAVNSSGNCYVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: QCQRIFQVNAPINCVCLHPNQAELIVGDQSGVIHIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat
Protein sequence:
MSNFLPDSSCYELLTIIGRGFEDLMVVNLARYKPSGEYVTVRRVNLEACTNEMVTFLQGELHVSKLFNHPNIVPYKATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLKVVHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSIGITACELANGHVPFKDMPSTQMLLEKLNGTVPCLLDTTTIPADELTMKTSRSSANYGLGESTAVSNVRAANGESTLHPYLRTFSSCFHNFVGQCLQRNPDFRPSAGALLNHPFFKQIKRRASEALPELLRPVTPITNFEGTRPQDPSGILGWCQTWSSWMWMTGNSRKTKTALGSGGAFWTL

Annotated regions:
phrase: YELLTIIGRGFEDLMVVNLARYKPSGEYVTVRRVNLEACTNEMVTFLQGELHVSKLFNHPNIVPYKATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLKVVHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSIGITACELANGHVPFKDMPSTQMLLEKLNGTVPCLLDTTTIPADELTMKTSRSSANYGLGESTAVSNVRAANGESTLHPYLRTFSSCFHNFVGQCLQRNPDFRPSAGALLNHPF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: YELLTIIGRGFEDLMVVNLARYKPSGEYVTVRRVNLEACTNEMVTFLQGELHVSKLFNHPNIVPYKATFIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLKVVHDFPKYSIKVLPWLSPEVLQQNLQGYDAKSDIYSIGITACELANGHVPFKDMPSTQMLLEKLNGTVPCLLDTTTIPADELTMKTSRSSANYGLGESTAVSNVRAANGESTLHPYLRTFSSCFHNFVGQCLQRNPDFRPSAGALLNHPF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain
Protein sequence:
MLLSVPLLLGLLGLAVAEPAVYFKEQFLDGDGWTSRWIESKHKSDFGKFVLSSGKFYGDEEKDKGLQTSQDARFYALSASFEPFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNSQVESGSLEDDWDFLPPKKIKDPDASKPEDWDERAKIDDPTDSKPEDWDKPEHIPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWGVTKAAEKQMKDKQDEEQRLKEEEEDKKRKEEEEAEDKEDDEDKDEDEEDEEDKEEDEEEDVPGQAKDEL

Annotated regions:
phrase: IPDPDAKKPEDW
type: CONSERVED_SITE
name: Calret/calnex_CS
description: Calreticulin/calnexin, conserved site

phrase: IMFGPDIC
type: CONSERVED_SITE
name: Calret/calnex_CS
description: Calreticulin/calnexin, conserved site

phrase: KHEQNIDCGGGYVKL
type: CONSERVED_SITE
name: Calret/calnex_CS
description: Calreticulin/calnexin, conserved site