nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MQDFWSKAMDAVAEQVSVQVFEAWIRPLKAGGEVGDGQFQVYAANDFSADWVKKRYGGLLEEILSEQLGEPVTLLFAADPALEKPVASKTQTVTPVQSGGETGDQENFHSGLDPRYTFDSFVVGGCNQFVHAAAARVAEAPAAAYNPLFIHGGVGLGKTHVMQAIGNRVLEIDPDKRVLYISSENFMTQLINSLRFKRVFDFKENFRSVDVLLVDDIQFIAGKKATQEEFFHTFNALYEAKKQIVMTADSFPHEIEHLEERLRSRFGMGLVADMQPPDLETRVAILQKKAGSEGLRLADEVAFFLADAVQTNVRELEGALIRVSAYASLTGKPITMALVKESLKDIVRGQDRAVTVEQIQKTVANYYKVKVTDLCSNSRSRIYSHPRQIAMYLCKQLTQHSYPEIGHRFGGRDHTTVLYAVSQVDKKQGSTPALADELASLKSMLQK

Annotated regions:
phrase: VEQIQKTVANYYKVKVTDLCSNSRSRIYSHPRQIAMYLCKQLTQHSYPEIGHRFGGRDHTTVLYAVSQ
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: AYNPLFIHGGVGLGKTHVMQAIGNRVLEIDPDKRVLYISSENFMTQLINSLRFKRVFDFKENFRSVDVLLVDDIQFIAGKKATQEEFFHTFNALYEAKKQIVMTADSFPHEIEHLEERLRSRFGMGLV
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: TVEQIQKTVANYYKVKVTDLCSNSRSRIYSHPRQIAMYLCKQLTQHSYPEIGHRFGGRDHTTVLYAVSQ
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: VEQIQKTVANYYKVKVTDLCSNSRSRIYSHPRQIAMYLCKQLTQHSYPEIGHRFGGRDHTTVLYAVSQVDKKQGSTPALADELASLKSM
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: DFWSKAMDAVAEQVSVQVFEAWIRPLKAGGEVGDGQFQVYAANDFSADWVKKRYGGLLEEIL
type: DOMAIN
name: DnaA_N_dom
description: DnaA N-terminal domain

phrase: IGHRFGGRDHTTVLYAVSQ
type: CONSERVED_SITE
name: Chromosome_initiator_DnaA_CS
description: Chromosomal replication control, initiator DnaA, conserved site

phrase: LDPRYTFDSFVVGGCNQFVHAAAARVAEAPAAAYNPLFIHGGVGLGKTHVMQAIGNRVLEIDPDKRVLYISSENFMTQLINSLRFKRVFDFKENFRSVDVLLVDDIQFIAGKKATQEEFFHTFNALYEAKKQIVMTADSFPHEIEHLEERLRSRFGMGLV
type: DOMAIN
name: DnaA_dom
description: Chromosomal replication initiator protein DnaA, ATPAse domain
Protein sequence:
MSRSLKKGPFVADHLLKKIEKLNIKGIQKVIVTWSRSSTIVPIMIGHTVAVHNGREHIPVFITDKMVGHKLGEFALTRTFKTHTKKVNKKTKR

Annotated regions:
phrase: NGREHIPVFITDKMVGHKLGEFAL
type: CONSERVED_SITE
name: Ribosomal_uS19_CS
description: Small ribosomal subunit protein uS19, conserved site
Protein sequence:
MENRTNFFHLHLISDSTGETLISAGRAASAQFRSAQPIEHVYPLIRNRKQLLPVLQAIDDAPGIVLYTIVDRELASLIDERCTEMGVASVNVLEPVMNAFQIYLGAPSRRRVGAQHVMNAGYFARIEALNFTMDHDDGQMPDDYNDADVVIIGISRTSKTPTSIYLANRGIKTANIPIVYGVPLPEGLLVATKPLIVCLIATTDRISQVRENRILGATQGFDREHYTDRAAISEELKYARSLCARHNWPLIDVTRRSIEETAAAIVALRPKLR

Annotated regions:
Protein sequence:
MNLLKEVLKNQVYPAMGCTEPVSVALCAAYAAKELGKPVQKAVFYLDAGTFKNGLAVRIPNTSGERGNLLAGTAGLLIAKPQLKMEILKAATPSILKRAKQLIDDKKAFIKVAPCKKHFYIKVEVENGKDKASCVISDSHTTVSKLTKNGKVIFENKPSKKKEDNYKQLLGKATLKDLIALADNADNTDLKYIKKGVEMNLNACKEGKKLKKVGFFLESTVEKSILQKNLVTETKIMAARVADARMDGIAVPVMSSGESGNQGVVAILVPYNVGKKSKVKEEKILKSIAFSHLLNGYVKVYTGSLSPLCGCAIAAGVGAAGAIVYQQNGDLKKITLAINNIISDIGGMLCDGAKSGCALKVVSSVDSAIRAAYMGLNNYGITELEGFIGKTAEETIQNLGNISITGMCDVDAVIVDIMKKKVK

Annotated regions:
phrase: MEILKAATPSILKRAKQLIDDKKAFIKVAPCKKHFYIKVEVENGKDKASCVISDSHTTVSKLTKNGKVIFENKPSKKKEDNYKQLLGKATLKDLIALADNADNTDLKYIKKGVEMNLNACKEGKKLKKVGFFLESTVEKSILQKNLVTETKIMAARVADARMDGIAVPVMSSGESGNQGVVAILVPYNVGKKSKVKEEKILKSIAFSHLLNGYVKVYTGSLSPLCGCAIAAGVGAAGAIVYQQNGDLKKITLAINNIISDIGGMLCDGAKSGCALKVVSSVDSAIRAAYMGLNNYGITELEGFIGKTAEETIQNLGNISITGMCDVDAVI
type: DOMAIN
name: Ser_deHydtase-like_asu
description: Serine dehydratase-like, alpha subunit
Protein sequence:
MMVLKVEELVTGKKSSNGETGEFLPDDFRDGQYEAAVTSEKQEDLKTLPAHHVSLAEQQWEREKQLEAELKKKKLEQRSKLENLEDLEIIIQLKKRKKYRKTKVPVAKEPEPEIITEPVDVPRFLKAALENKLAVVEKFLSDQNNPDVCDEYKRTALHRACLEGHLAIVEKLMEAGAQIEFRDMLESTAIHWACRGGNLEVLKLLLNKGAKISARDKLLSTALHVAVRTGHYECAEHLIACEADLNAKDREGDTPLHDAVRLNRYKMIRLLIMYGADLTIKNSAGKTPMDLVLNWQNGTKAIFDSLKENSYKTSRIATF

Annotated regions:
phrase: EGDTPLHDAVRLNRYKMIRLLIMYGADLTIKN
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: LLSTALHVAVRTGHYECAEHLIACEADLNAKD
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: LESTAIHWACRGGNLEVLKLLLNKGAKISARD
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: KAALENKLAVVEKFLSDQNNPDVCDEYKRTALHRACLEGHLAIVEKLMEAGAQIEFRDMLESTAIHWACRGGNLEVLKLLLNKGAKISAR
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: STALHVAVRTGHYECAEHLIACEADLNAKDREGDTPLHDAVRLNRYKMIRLLIMYGADLTIK
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: EGDTPLHDAVRLNRYKMIRLLIMYGADLT
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: YKRTALHRACLEGHLAIVEKLMEAGAQIE
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: LESTAIHWACRGGNLEVLKLLLNKGAKIS
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: LLSTALHVAVRTGHYECAEHLIACEADLN
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: YKRTALHRACLEGHLAIVEKLMEAGAQIEFRD
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat
Protein sequence:
MENRWQVMIVWQVDRMRIRTWNSLVKHHMYVSKKATGWFYRHHYESRHPKVSSEVHIPLGEAKLVVITYWGLHTGEREWHLGHGVSIEWRLKRYRTQVDPDLADQLIHLHYFACFSESAIRKAILGHRVSPRCEYQAGHNKVGSLQYLALRALLNPNKKTKPPLPSVKKLAEDRWNKPQKIRGHRENQTTNGH

Annotated regions:
Protein sequence:
MALNLCTSPKWIGTTVFDSASSSKPSLASSFSTTSFSSSILCSKRVGLQRLSLRRSISVSVRSSLETAGPTVTVGKVTEVNKDTFWPIVNAAGDKTVVLDMFTKWCGPCKVIAPLYEELSQKYLDVVFLKLDCNQDNKSLAKELGIKVVPTFKILKDNKIVKEVTGAKFDDLVAAIDTVRSS

Annotated regions:
phrase: VTEVNKDTFWPIVNAAGDKTVVLDMFTKWCGPCKVIAPLYEELSQKYLDVVFLKLDCNQDNKSLAKELGIKVVPTFKILKDNKIVKEVTGAKFDDLVAAI
type: DOMAIN
name: Thioredoxin_domain
description: Thioredoxin domain

phrase: VLDMFTKWCGPCKVIAPL
type: CONSERVED_SITE
name: Thioredoxin_CS
description: Thioredoxin, conserved site

phrase: ISVSVRSSLETAGPTVTVGKVTEVNKDTFWPIVNAAGDKTVVLDMFTKWCGPCKVIAPLYEELSQKYLDVVFLKLDCNQDNKSLAKELGIKVVPTFKILKDNKIVKEVTGAKFDDLVAAIDTVR
type: DOMAIN
name: Thioredoxin_domain
description: Thioredoxin domain
Protein sequence:
MSKEKFQRVKPHINVGTIGHVDHGKTTLTAAITTVLSKKYGGSARAFDQIDNAPEEKARGITINTSHVEYDTELRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRDLLTQYDFPGDDTPIIRGSALKALEGDADWESKILDLSKFLDTYIPEPKRAIDQPFLLPIEDVFSISGRGTVVTGRVERGIVKVGEEVEIVGIKKTTKTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDEIERGQVLAKPGSIHPHTTFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGSIELPEGVEMVMPGDNIKMTVTLIHPIAMADGLRFAIREGGRTVGAGVVSKVLV

Annotated regions:
phrase: SIHPHTTFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGSIELPEGVEMVMPGDNIKMTVTLIHPIAMADGLRFAIREGGRTVGAGVVSK
type: DOMAIN
name: Transl_elong_EFTu/EF1A_C
description: Translation elongation factor EFTu/EF1A, C-terminal

phrase: KPHINVGTIGHVDHGKTTLTAAITTVLSKKYGGSARAFDQIDNAPEEKARGITINTSHVEYDTELRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRDLLTQYDFPGDDTPIIRGSALKALEGDADWESKILDLSKFLDTYIPEP
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: NVGTIGHVDHGKT
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: ARGITINT
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: AHVDCPGHAD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: TGAAQMDGAIL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: IIVFLNKCD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: PHINVGTIGHVDHGKTTLTAAITTVLSKKYGGSARAFDQIDNAPEEKARGITINTSHVEYDTELRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRDLLTQYDFPGDDTPIIRGSALKALEGDADWESKILDLSKFLDTYIPE
type: DOMAIN
name: EF-Tu_GTP-bd
description: Elongation factor Tu (EF-Tu), GTP-binding domain

phrase: DNAPEEKARGITINT
type: CONSERVED_SITE
name: G_TR_CS
description: Tr-type G domain, conserved site

phrase: KPHINVGTIGHVDHGKTTLTAAITTVLSKKYGGSARAFDQIDNAPEEKARGITINTSHVEYDTELRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRDLLTQYDFPGDDTPIIRGSALKALEGDADWESKILDLSKFLDTYI
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: FLLPIEDVFSISGRGTVVTGRVERGIVKVGEEVEIVGIKKTTKTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDEIERGQVLAKP
type: DOMAIN
name: EFTU_2
description: Elongation factor Tu, domain 2

phrase: GTVVTGRVERGIVKVGEEVEIVGIKKTTKTTCTGVEMFRKLLDEGRAGENVGVLLRGTKRDEIERGQVL
type: DOMAIN
name: EFTu-like_2
description: Translation elongation factor EFTu-like, domain 2

phrase: INVGTIGHVDHGKTTLTAAITTVLSKKYGGSARAFDQIDNAPEEKARGITINTSHVEYDTELRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMPQTREHILLGRQVGVPYIIVFLNKCDMVDDEE
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain
Protein sequence:
MADLKITWLGHAAFLLEAEKKLLIDPFISENPKAPCTPEELNPDIIAVTHGHRDHLGDTIEIGARTGCRIISIHEVANYIKSKGVFAEGMNKGGTVDLEGVTLTMTQALHSSSIDASGFSFDGGSPAGFVIGIGGHSIYHAGDTGIFGDMQLIGELYEPEIALLPIGSRFTMGIKEAVKAVELIEPQIVVPMHYNTFDVIKQDPEVFRKAVEAKVDTKVIILDPGESIEL

Annotated regions:
phrase: LLIDPFISENPKAPCTPEELNPDIIAVTHGHRDHLGDTIEIGARTGCRIISIHEVANYIKSKGVFAEGMNKGGTVDLEGVTLTMTQALHSSSIDASGFSFDGGSPAGFVIGIGGHSIYHAGDTGIFGDMQLIGELYEPEIALLPIGSRFTMGIKEAVKAVELIEPQIVVPMH
type: DOMAIN
name: Metallo-B-lactamas
description: Metallo-beta-lactamase

phrase: GHAAFLLEAEKKLLIDPFISENPKAPCTPEELNPDIIAVTHGHRDHLGDTIEIGARTGCRIISIHEVANYIKSKGVFAEGMNKGGTVDLEGVTLTMTQALHSSSIDASGFSFDGGSPAGFVIGIGGHSIYHAGDTGIFGDMQLIGELYEPEIALLPIGSRFTMGIKEAVKAVELIEPQIVVPM
type: DOMAIN
name: Metallo-B-lactamas
description: Metallo-beta-lactamase
Protein sequence:
MSIKLTPLEDKIIVKQAEAQTQTASGLYIPDNAKEKPQQGEVLAVGPGRRDDKGERIPMDVKVGDKVLYSKYGGTEVHYEGEDYLIVGARDILAILG

Annotated regions:
phrase: LTPLEDKIIVKQAEAQTQTASGLY
type: CONSERVED_SITE
name: Chaprnonin_Cpn10_CS
description: Chaperonin GroES, conserved site
Protein sequence:
MLTMVGLTPAEDRSEIAFFDVETTIPFRVGQGYAILEFGSILVCPKKLVELKNYSVLVRPANLNLITPRSVKCNGIKREDVESALTFADIADTVYDILHGRIWAGHNILKFDCPRIREAFAEIGRDPPEPKGTIDSLALLTQRFGRRAGDMKMATLATYFGLGNQTHRSLDDVRMNFEVLKYCATVLFLESSLPDELIENSVTTTTPETSSRRRRTIKKSPLQSPTDQQTGENMTTIPILSFVSSAEAQTDPFDMSTLRNEIAPEVLQSDVPMEEEQNQQSETVASEGTGDQEGFMELDKISVSSIRATHVPLYDGSQTMKLQLFLGDRPLQLHCPRLKVRFGINGKFMDKAGRRRLNFVIDLYPSLCNVLQECDSAAQTISVDSGSGSDWNPLVIPMKGFLNCPTARIHIPTELNGDIDRYAAEIHQKEFSGATATQKLISSNPKAEEIESLLNPRTVLDAFLSLEPYDYQQRAGIRLVARKLVIH

Annotated regions:
phrase: FFDVETTIPFRVGQGYAILEFGSILVCPKKLVELKNYSVLVRPANLNLITPRSVKCNGIKREDVESALTFADIADTVYDILHGRIWAGHNILKFDCPRIREAFAEIGRDPPEPKGTIDSLALLTQRFGRRAGDMKMATLATYFGLGNQTHRSLDDVRMNFEV
type: DOMAIN
name: Exonuclease_RNaseT/DNA_pol3
description: Exonuclease, RNase T/DNA polymerase III

phrase: EIAFFDVETTIPFRVGQGYAILEFGSILVCPKKLVELKNYSVLVRPANLNLITPRSVKCNGIKREDVESALTFADIADTVYDILHGRIWAGHNILKFDCPRIREAFAEIGRDPPEPKGTIDSLALLTQRFGRRAGDMKMATLATYFGLGNQTHRSLDDVRMNFEVLKYCATVLF
type: DOMAIN
name: Exonuclease_RNaseT/DNA_pol3
description: Exonuclease, RNase T/DNA polymerase III
Protein sequence:
MPEEGSGCSVRRRPYGCVLRAALVPLVAGLVICLVVCIQRFAQAQQQLPLESLGWDVAELQLNHTGPQQDPRLYWQGGPALGRSFLHGPELDKGQLRIHRDGIYMVHIQVTLAICSSTTASRHHPTTLAVGICSPASRSISLLRLSFHQGCTIASQRLTPLARGDTLCTNLTGTLLPSRNTDETFFGVQWVRP

Annotated regions:
phrase: LRIHRDGIYMVHIQVT
type: CONSERVED_SITE
name: TNF_CS
description: Tumour necrosis factor, conserved site

phrase: AELQLNHTGPQQDPRLYWQGGPALGRSFLHGPELDKGQLRIHRDGIYMVHIQVTLAICSSTTASRHHPTTLAVGICSPASRSISLLRLSFHQGCTIASQRLTPLARGDTLCTNLTGTLLPSRNTDETFFGV
type: DOMAIN
name: TNF_dom
description: Tumour necrosis factor domain

phrase: QLNHTGPQQDPRLYWQGGPALGRSFLHGPELDKGQLRIHRDGIYMVHIQVTLAICSSTTASRHHPTTLAVGICSPASRSISLLRLSFHQGCTIASQRLTPLARGDTLCTNLTGTLLPSRNTDETFFGVQW
type: DOMAIN
name: TNF_dom
description: Tumour necrosis factor domain

phrase: VAELQLNHTGPQQDPRLYWQGGPALGRSFLHGPELDKGQLRIHRDGIYMVHIQVTLAICSSTTASRHHPTTLAVGICSPASRSISLLRLSFHQGCTIASQRLTPLARGDTLCTNLTGTLLPSRNTDETFFG
type: DOMAIN
name: TNF_dom
description: Tumour necrosis factor domain

phrase: GRSFLHGPELDKGQLRIHRDGIYMVHIQVTLAICSSTTASRHHPTTLAVGICSPASRSISLLRLSFHQGCTIASQRLTPLARGDTLCTNLTGTLLPSRNTDETFFG
type: DOMAIN
name: TNF_dom
description: Tumour necrosis factor domain
Protein sequence:
MRESLKNSKRLVIKVGTSTLMYGNGHINLRTIEKLAMVLSDLRNEGKEVILVSSGAIGVGCHKLQLPVRPTSIPEQQAVASVGQSELMHIYSKFFGEYGQVVGQVLLTRDVTDFPISRENVMNTLESLLERGIIPIVNENDTVAVEELEHVTKYGDNDLLSAIVAKLVQADLLIMLSDIDGFYGSNPSTDPDAVMFSEINQITPEIEALAGGKGSKFGTGGMLTKLSAASYCMNANQKMILTNGKNPTIIFDIMQGEQVGTLFASKKEEFSHDGTH

Annotated regions:
phrase: SKFGTGGMLTKLSAASY
type: CONSERVED_SITE
name: Glutamate_5-kinase_CS
description: Glutamate 5-kinase, conserved site

phrase: KRLVIKVGTSTLMYGNGHINLRTIEKLAMVLSDLRNEGKEVILVSSGAIGVGCHKLQLPVRPTSIPEQQAVASVGQSELMHIYSKFFGEYGQVVGQVLLTRDVTDFPISRENVMNTLESLLERGIIPIVNENDTVAVEELEHVTKYGDNDLLSAIVAKLVQADLLIMLSDIDGFYGSNPSTDPDAVMFSEINQITPEIEALAGGKGSKFGTGGMLTKLSAASYCMNANQKMILT
type: DOMAIN
name: Asp/Glu/Uridylate_kinase
description: Aspartate/glutamate/uridylate kinase

phrase: RLVIKVGTSTLMYGNGHINLRTIEKLAMVLSDLRNEGKEVILVSSGAIGVGCHKLQLPVRPTSIPEQQAVASVGQSELMHIYSKFFGEYGQVVGQVLLTRDVTDFPISRENVMNTLESLLERGIIPIVNENDTVAVEELEHVTKYGDNDLLSAIVAKLVQADLLIMLSDIDGFYGSNPSTDPDAVMFSEINQITPEIEALAGGKGSKFGTGGMLTKLSAASYCMNANQKMILTNGKNPTIIFDIMQGEQVGTLF
type: DOMAIN
name: G5K_ProB
description: Glutamate-5-kinase domain
Protein sequence:
MAKEIVRKAKLQFPAGQAKPGPALAGVGINMPEFTKAFNDQTRDRGQEPVPVLITVYKDKSFEFKLFTSPTAYKLTQIAKIKKGSSKANKEKVATITLDQLKEIAEYKLPDLNTNNIDSAMRQIAGTAKQMGIEIEGYAEWLKKGTN

Annotated regions:
phrase: RQIAGTAKQMGIEIE
type: CONSERVED_SITE
name: Ribosomal_uL11_CS
description: Large ribosomal subunit protein uL11, conserved site

phrase: KLQFPAGQAKPGPALAGVGINMPEFTKAFNDQTRDRGQEPVPVLITVYKDKS
type: DOMAIN
name: Ribosomal_uL11_N
description: Large ribosomal subunit protein uL11, N-terminal

phrase: TSPTAYKLTQIAKIKKGSSKANKEKVATITLDQLKEIAEYKLPDLNTNNIDSAMRQIAGTAKQMGIE
type: DOMAIN
name: Ribosomal_uL11_C
description: Large ribosomal subunit protein uL11, C-terminal
Protein sequence:
MDKSKQPFRKSKRSFRRRLPPIGSGDQINYRNMSLISRFISEQGKILSRRVNRLTLKQQRLITIAIKQARILSLLPFLNNEKQFERAESIPRTTGPRTRNK

Annotated regions:
phrase: INYRNMSLISRFISEQGKILSRR
type: CONSERVED_SITE
name: Ribosomal_bS18_CS
description: Small ribosomal subunit protein bS18, conserved site
Protein sequence:
MSDYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAAKKGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGFDSPYVPGWDCHGLPIELKVEQEFGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANIIRALGRIIKNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFRAVDQDAVKAKFGLPGVSGPVSLVIWTTTPWTLPANRAISLAPDFDYALVQIDGQAVILAKDLVESVIQRIGAAEYTILGTVKGAELELLRFTHPFMGFDVPAILGDHVTLDAGTGAVHTAPGHGPDDYVIGQKYGLETANPVGPDGAYLPGTYPTLDGVNVFKANDIVIELLKEKGALLHVEKMQHSYPCCWRHKTPIIFRATPQWFVSMDKEGLRQQSLKEIKGVQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKETQELLPIERTLAAMEEVAKRVEVDGIQAWWDLDPKEILGEDADQYEKVPDTLDVWFDSGSTSYSVVDARPEFAGHAADMYLEGSDQHRGWFMSSLMISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFNPATDMVKPEEMVVLDRWAVGCAKTAQQEILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPIMSFTADEIWGYLPGEREKYVFTGEWYDGLFGLEENEEFNDAFWDDVRYIKDQVNKELENQKANGIKSNLEAKVTLKYADDANGTIKKLKLLGEEVRFIFITSQFVISEQAGGIDDENIQYNAGNTTVQAVVTRAEGDKCPRCWHYTTDVGKVAEHADICGRCVSNIAGNGEQRKFA

Annotated regions:
phrase: PYANGSIHIGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: DRWAVGCAKTAQQEILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPIMSFTADEIWGYLPGEREKYVFTGEWYDGLFGLEENEEFNDAFWDDVRYIKDQVNKELENQKANGIKSNLEAKV
type: DOMAIN
name: M/V/L/I-tRNA-synth_anticd-bd
description: Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding

phrase: GDKCPRCWHYTTDVGKVAEHADICGRCVS
type: DOMAIN
name: Znf_FPG/IleRS
description: Zinc finger, FPG/IleRS-type

phrase: MLARWTDDDLYGIIRAAKKGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGFDSPYVPGWDCHGLPIELKVEQEFGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFKTEANIIRALGRIIKNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFRAVDQDAVKAKFGLPGVSGPVSLVIWTTTPWTLPANRAISLAPDFDYALVQIDGQAVILAKDLVESVIQRIGAAEYTILGTVKGAELELLRFTHPFMGFDVPAILGDHVTLDAGTGAVHTAPGHGPDDYVIGQKYGLETANPVGPDGAYLPGTYPTLDGVNVFKANDIVIELLKEKGALLHVEKMQHSYPCCWRHKTPIIFRATPQWFVSMDKEGLRQQSLKEIKGVQWIPDWGQARIESMVANRPDWCISRQRTWGVPMSLFVHKETQELLPIERTLAAMEEVAKRVEVDGIQAWWDLDPKEILGEDADQYEKVPDTLDVWFDSGSTSYSVVDARPEFAGHAADMYLEGSDQHRGWFMSSLMISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADILRLWVASTDYTGEMA
type: DOMAIN
name: aa-tRNA-synth_Ia
description: Aminoacyl-tRNA synthetase, class Ia

phrase: VSDEILKRAADSYRRIRNTARFLLANLNGFNPATDMVKPEEMVVLDRWAVGCAKTAQQEILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKADSVARRSCQTALYHIAEALVRWMAPIMSFTADEIWGYLPGEREKYVFTGEWYDGLFGLEENEEFNDAFWDDVRYIKDQV
type: DOMAIN
name: Anticodon_Ile_BEm
description: Isoleucyl tRNA synthetase type 1, anticodon-binding domain
Protein sequence:
MHTYNRVILKLSGEALAGDQGYGIDPNVIQSIAKQIKDVVGLGTEVAIVVGAGNIWRGMAGSSQGMDRATADYMGMLATVMNALALQDSLEDIEVESRVQTSIEMRQVAEPYIRRKAIRHLEKKRVVIFAAGTGNPYFTTDTTAALRAAEIEADVILMAKNKVDGVYSADPFKDETAVKYEELSYLDVLKDGLGVMDSTASSLCMDNDIPLLVFSITEEGNIKRAVEGEKNRNDCEGELLMSAEIMQDAKAKMTKSIEALNRELATLRAGRANPALLDKVLVSYYGMDTPLNQVATVSVPEGRLLVVSPFDKSSIAEIEKAILKADLGLTPNNDGSVIRITIPALTEERRKELAKLVRKYAEDARVSVRNIRRDANDSLKKQEKDGDITEDESRRGQDETQKLTNDHVKEIDSIAEAKEKEIMEV

Annotated regions:
phrase: NRVILKLSGEALAGDQGYGIDPNVIQSIAKQIKDVVGLGTEVAIVVGAGNIWRGMAGSSQGMDRATADYMGMLATVMNALALQDSLEDIEVESRVQTSIEMRQVAEPYIRRKAIRHLEKKRVVIFAAGTGNPYFTTDTTAALRAAEIEADVILMAKNKVDGVYSADPFKDETAVKYEELSYLDVLKDGLGVMDSTASSLCMDNDIPLLVF
type: DOMAIN
name: Asp/Glu/Uridylate_kinase
description: Aspartate/glutamate/uridylate kinase

phrase: LNRELATLRAGRANPALLDKVLVSYYGMDTPLNQVATVSVPEGRLLVVSPFDKSSIAEIEKAILKADLGLTPNNDGSVIRITIPALTEERRKELAKLVRKYAEDARVSVRNIRRDANDSLKKQEKDGDITEDESRRGQDETQKLTNDHVKEIDSIAEAKEKEI
type: DOMAIN
name: Ribosome_recyc_fac_dom
description: Ribosome recycling factor domain
Protein sequence:
MNNAKIWTVVKPSTGIPLILGAVAVAALIVHAGLLTNTTWFANYWNGNPMATVVAVAPAQ

Annotated regions:
phrase: VAALIVHAGLLTNTTW
type: CONSERVED_SITE
name: Antenna_alpha_CS
description: Antenna complex, alpha subunit conserved site

phrase: NAKIWTVVKPSTGIPLILGAVAVAALIVHAGLLTNTTW
type: DOMAIN
name: Antenna_a/b
description: Antenna complex, alpha/beta subunit
Protein sequence:
MARAKLKFRLHRTAIVLICLALLVLLMQGASYFSLSHQLARSEQVEELAQTLAKQVAFSLSPIMDSGDDNIDSQKVDAILQQLTQSSRILDASVYQIDGTLVASAGENVKVRDRLALDGKRPGSYFNHQIVEMIAGNSGPSGFLRMTLDTHVLATESKQVDNTTNLLRLMILVALAVGIILARTLLQGRRSRWQQSPYLLTANIPVKEEDESEDDTPEALVGQAETDHKPADK

Annotated regions:
Protein sequence:
MRLGAHLSIAKGLPRTAAMATSIGANTFQYFTRNPRGGAARQIPGKEIQAWREARRRADLYPIAGHLPYTVNLGAAAERQQEFTRMVLHDDTLRVAAIDGEYLISHPGHYEGERQAGLDRIIQLIEEAYLSITPPGPMLLLETMAGQGKEVGTIDDLCYILEGLGWPDRVGVCLDSAHLFAAGWDLRTPAGCQQLVQELAAKIGLDRVKAMHLNDSAAPLGSHRDRHAGIGKGELGREGIAAVVNDPFLGELPLFLETPVANYEEYGEEIALIQKLKSV

Annotated regions:
phrase: MHLNDSAAPLGSHRDR
type: BINDING_SITE
name: AP_endonuc_F2_Zn_BS
description: AP endonuclease 2, zinc binding site

phrase: ATSIGANTFQYFTRNPRGGAARQIPGKEIQAWREARRRADLYPIAGHLPYTVNLGAAAERQQEFTRMVLHDDTLRVAAIDGEYLISHPGHYEGERQAGLDRIIQLIEEAYLSITPPGPMLLLETMAGQGKEVGTIDDLCYILEGLGWPDRVGVCLDSAHLFAAGWDLRTPAGCQQLVQELAAKIGLDRVKAMHLNDSAAPLGSHRDRHAGIGKGELGREGIAAVVNDPFLGELPLFLETPVANYEEYGEEIALI
type: DOMAIN
name: Xyl_isomerase-like_TIM-brl
description: Xylose isomerase-like, TIM barrel domain
Protein sequence:
MSATALFTRRSVSTSNPELRPIPGPKPLPLLGNLFDFDFDNLTKSLGELGKIHGPIYSITFGASTEIMVTSREIAQELCDETRFCKLPGGALDVMKAVVGDGLFTAETSNPKWAIAHRIITPLFGAMRIRGMFDDMKDICEQMCLRWARFGPDEPLNVCDNMTKLTLDTIALCTIDYRFNSFYRENGAAHPFAEAVVDVMTESFDQSNLPDFVNNYVRFRAMAKFKRQAAELRRQTEELIAARRQNPVDRDDLLNAMLSAKDPKTGEGLSPESIVDNLLTFLIAGHETTSSLLSFCFYYLLENPHVLRRVQQEVDTVVGSDTITVDHLSSMPYLEAVLRETLRLRDPGPGFYVKPLKDEVVAGKYAVNKDQPLFIVFDSVHRDQSTYGADADEFRPERMLKDGFDKLPPCAWKPFGNGVRACVGRPFAMQQAILAVAMVLHKFDLVKDESYTLKYHVTMTVRPVGFTMKVRLRQGQRATDLAMGLHRGHSQEASAAASPSRASLKRLSSDVNGDDTDHKSQIAVLYASNSGSCEALAYRLAAEATERGFGIRAVDVVNNAIDRIPVGSPVILITASYNGEPADDAQEFVPWLKSLESGRLNGVKFAVFGNGHRDWANTLFAVPRLIDSELARCGAERVSLMGVSDTCDSSDPFSDFERWIDEKLFPELETPHGPGGVKNGDRAVPRQELQVSLGQPPRITMRKGYVRAIVTEARSLSSPGVPEKRHLELLLPKDFNYKAGDHVYILPRNSPRDVVRALSYFGLGEDTLITIRNTARKLSLGLPLDTPITATDLLGAYVELGRTASLKNLWTLVDAAGHGSRAALLSLTEPERFRAEVQDRHVSILDLLERFPDIDLSLSCFLPMLAQIRPRAYSFSSAPDWKPGHATLTYTVVDFATPATQGINGSSKSKAVGDGTAVVQRQGLASSYLSSLGPGTSLYVSLHRASPYFCLQKSTSLPVIMVGAGTGLAPFRAFLQERRMAAEGAKQRFGPALLFFGCRGPRLDSLYSVELEAYETIGLVQVRRAYSRDPSAQDAQGCKYVTDRLGKCRDEVARLWMDGAQVLVCGGKKMANDVLEVLGPMLLEIDQKRGETTAKTVVEWRARLDKSRYVEEVYV

Annotated regions:
phrase: FGNGVRACV
type: CONSERVED_SITE
name: Cyt_P450_CS
description: Cytochrome P450, conserved site

phrase: VLYASNSGSCEALAYRLAAEATERGFGIRAVDVVNNAIDRIPVGSPVILITASYNGEPADDAQEFVPWLKSLESGRLNGVKFAVFGNGHRDWANTLFAVPRLIDSELARCGAERVSLMGVSDTCDSSDPFSDFER
type: DOMAIN
name: Flavodoxin/NO_synth
description: Flavodoxin/nitric oxide synthase

phrase: MVGAGTGLAPFRAFLQERRMAAEGAKQRFGPALLFFGCRGPRLDSLYSVELEAYETIGLVQVRRAYSRDPSAQDAQGCKYVTDRLGKCRDEVARLWMDGAQVLVCGGKKMAND
type: DOMAIN
name: OxRdtase_FAD/NAD-bd
description: Oxidoreductase FAD/NAD(P)-binding

phrase: IAVLYASNSGSCEALAYRLAAEATERGFGIRAVDVVNNAIDRIPVGSPVILITASYNGEPADDAQEFVPWLKSLESGRLNGVKFAVFGNGHRDWANTLFAVPRLIDSELARCGAERVSLMGVSDTCDSSDPFSDFERWIDEK
type: DOMAIN
name: Flavodoxin/NO_synth
description: Flavodoxin/nitric oxide synthase

phrase: VTEARSLSSPGVPEKRHLELLLPKDFNYKAGDHVYILPRNSPRDVVRALSYFGLGEDTLITIRNTARKLSLGLPLDTPITATDLLGAYVELGRTASLKNLWTLVDAAGHGSRAALLSLTEPERFRAEVQDRHVSILDLLERFPDIDLSLSCFLPMLAQIRPRAYSFSSAPDWKPGHATLTYTVVDFATP
type: DOMAIN
name: CysJ-like_FAD-binding
description: Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding

phrase: KGYVRAIVTEARSLSSPGVPEKRHLELLLPKDFNYKAGDHVYILPRNSPRDVVRALSYFGLGEDTLITIRNTARKLSLGLPLDTPITATDLLGAYVELGRTASLKNLWTLVDAAGHGSRAALLSLTEPERFRAEVQDRHVSILDLLERFPDIDLSLSCFLPMLAQIRPRAYSFSSAPDWKPGHATLTYTVVDFATPATQGINGSSKSKAVGDGTAVVQRQGLASSYLSSLGPGTSLYVSLHRASPYFCL
type: DOMAIN
name: FAD-bd_FR_type
description: FAD-binding domain, ferredoxin reductase-type
Protein sequence:
MITISESAQAHFRKLLEKQAENTNIRVFVMNPGTPNAECGVSYCPPDAVEPEDSRQPFDGFDAIIDPNSAPFLEEAAIDFISDQMGSQLTLKAPNAKMRKVDDNASLAERVEYVLQSQVNPSLAAHGGRVTLTEITDDGVAILQFGGGCNGCSMVDVTLKEGIEKQLLELFPGELTGAKDATEHARGEHSFY

Annotated regions:
phrase: ITISESAQAHFRKLLEKQAENTNIRVFVMNPGTPNAECGVSYCPPDAVEPEDSRQPFDGFDAIIDPNSAPFLEEAAIDFISDQMGSQLTLKAPNAKM
type: DOMAIN
name: FeS_biogenesis
description: FeS cluster biogenesis

phrase: VEYVLQSQVNPSLAAHGGRVTLTEITDDGVAILQFGGGCNGCSMVDVTLKEGIEKQLLELFPG
type: DOMAIN
name: NIF_FeS_clus_asmbl_NifU_C
description: NIF system FeS cluster assembly, NifU, C-terminal
Protein sequence:
MTNRKSLAMVIPMLLAASNGVNALEVFHKHGNKLELYGSINPNHKLNHSFLANKITSHKDDTNAILGLSGEVNIADELFSYATIEYGIDLSVPEQLLDKQQPNNLRLGYAGFKYGNWGSIDYGRNYGVLHDVQALTNRSPYINKDSIFSYNDNYMTGRSNSLLTYKNDDIFGLIDGMSFILQYQDQSENRAQNQTNGPGWGISIKYETDVGLTAIGSCFSSQRFQSDKSNQDNKLTPSVGAYGLGFKYDANDIYIAAFYGEGRNLTPSLNILSDNNASKDQPYINKTQNIEAIAEYNFHSGFHPSLSYLDSKGQNLNIKDATTVPKNLELAKQINISTRYEFNKNISTYMNYTINLLKSDNVIKEQNIPTDNTIGAGIVYHF

Annotated regions:
phrase: NKLELYGSINPNHKLNHSFLANKITSHKDDTNAILGLSGEVNIADELFSYATIEYGIDLSVPEQLLDKQQPNNLRLGYAGFKYGNWGSIDYGRNYGVLHDVQALTNRSPYINKDSIFSYNDNYMTGRSNSLLTYKNDDIFGLIDGMSFILQYQDQSENRAQNQTNGPGWGISIKYETDVGLTAIGSCFSSQRFQSDKSNQDNKLTPSVGAYGLGFKYDANDIYIAAFYGEGRNLTPSLNILSDNNASKDQPYINKTQNIEAIAEYNFHSGFHPSLSYLDSKGQNLNIKDATTVPKNLELAKQINISTRYEFNKNISTYMNYTINLLKSDNVIKEQNIPTDNTIGAGIVYH
type: DOMAIN
name: Gram_neg_porin_domain
description: Porin domain, Gram-negative type
Protein sequence:
MFISISAGIVTFLLTLVEIPAFIQFYRKAQITGQQMHEDVKQHQAKAGTPTMGGLVFLITSVLVAFFFALFSSQFSNNVGMILFILVLYGLVGFLDDFLKVFRKINEGLNPKQKLALQLLGGVIFYLFYERGGDILSVFGYPVHLGFFYIFFALFWLVGFSNAVNLTDGVDGLASISVVISLSAYGVIAYVQGQMDILLVILAMIGGLLGFFIFNHKPAKVFMGDVGSLALGGMLAAISMALHQEWTLLIIGIVYVFETTSVMMQVSYFKLTGGKRIFRMTPVHHHFELGGLSGKGNPWSEWKVDFFFWGVGLLASLLTLAILYLM

Annotated regions:
phrase: KAGTPTMGGLVF
type: CONSERVED_SITE
name: PNAcMuramoyl-5peptid_Trfase_CS
description: Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site

phrase: NAVNLTDGVDG
type: CONSERVED_SITE
name: PNAcMuramoyl-5peptid_Trfase_CS
description: Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site

phrase: KAGTPTMGGLVF
type: CONSERVED_SITE
name: PNAcMuramoyl-5peptid_Trfase_CS
description: Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site