nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MIEFSDPILTSQEALMLESTLFNGDTDKEWQAMRKAGSKVGCEILRDYSECGVLPESPHLLVLVGKGHNGGDALIAAHTILEHVTDAQIDVLFVFGERTLKPLAARAWQELQEFKVNQVHIILLTTLKKSYTLSLDGIFGASYCSPLPSQVALLIEQVNALSVDLRAAVDLPSGLNEKSAFKADFTYATGCVKSEILACSNAGRIRYLDLGFFNPGETFGLGTDRVLKPTLLLALAKLRPSQSDKRTYGHIFILGGSLRYPGAVLMTVKSALKSGVGLVTACVPESLVAEYAAAAPEAMWVGMPVDLESGGMNLKGFKKLEALLSNATALVVGPGMGRSQATTALLTEVFSKTRLPLVIDADALQQPWINELQTPAILTPHTGEFNRIGAGCDLKTLVSRTGTTVVLKGPTTRVMGSDGNTYLSFYGGPVLARGGSGDLLAGLIGGLLAQTPHDLPLAAARGVVWHGMAADLLARSQGQTATRITELLTELPKVLKALDKN

Annotated regions:
phrase: KPTLLLALAKLRPSQSDKRTYGHIFILGGSLRYPGAVLMTVKSALKSGVGLVTACVPESLVAEYAAAAPEAMWVGMPVDLESGGMNLKGFKKLEALLSNATALVVGPGMGRSQATTALLTEVFSKTRLPLVIDADALQQPWINELQTPAILTPHTGEFNRIGAGCDLKTLVSRTGTTVVLKGPTTRVMGSDGNTYLSFYGGPVLARGGSGDLLAGLIGGLLAQTPHDLPLAAARGVVWHGMAADLLARSQGQTATRITELLTELPKVLKA
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: LLLALAKLRPSQSDKRTYGHIFILGGSLRYPGAVLMTVKSALKSGVGLVTACVPESLVAEYAAAAPEAMWVGMPVDLESGGMNLKGFKKLEALLSNATALVVGPGMGRSQATTALLTEVFSKTRLPLVIDADALQQPWINELQTPAILTPHTGEFNRIGAGCDLKTLVSRTGTTVVLKGPTTRVMGSDGNTYLSFYGGPVLARGGSGDLLAGLIGGLLAQTPHDLPLAAARGVVWHGMAADLLARSQGQTATRITELLTELPKVL
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: MRKAGSKVGCEILRDYSECGVLPESPHLLVLVGKGHNGGDALIAAHTILEHVTDAQIDVLFVFGERTLKPLAARAWQELQEFKVNQVHIILLTTLKKSYTLSLDGIFGASYCSPLPSQVALLIEQVNALSVDLRAAVDLPSGLNEKSAFKADFTYATGCV
type: DOMAIN
name: YjeF_N_dom
description: YjeF N-terminal domain

phrase: FILGGSLRYPGAVLMTVKSALKSGVGLVTACVPESLVAEYAAAAPEAMWVGMPVDLESGGMNLKGFKKLEALLSNATALVVGPGMGRSQATTALLTEVFSKTRLPLVIDADALQQPWINELQTPAILTPHTGEFNRIGAGCDLKTLVSRTGTTVVLKGPTTRVMGSDGNTYLSFYGGPVLARGGSGDLLAGLIGGLLAQTPHDLPLAAARGVVWHGMAADLLARSQGQTATRITELLTEL
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: KPTLLLALAKLRPSQSDKRTYGHIFILGGSLRYPGAVLMTVKSALKSGVGLVTACVPESLVAEYAAAAPEAMWVGMPVDLESGGMNLKGFKKLEALLSNATALVVGPGMGRSQATTALLTEVFSKTRLPLVIDADALQQPWINELQTPAILTPHTGEFNRIGAGCDLKTLVSRTGTTVVLKGPTTRVMGSDGNTYLSFYGGPVLARGGSGDLLAGLIGGLLAQTPHDLPLAAARGVVWHGMAADLLARSQGQTATRITELLTELPKVLKALD
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: SDKRTYGHIFILGGSLRYPGAVLMTVKSALKSGVGLVTACVPESLVAEYAAAAPEAMWVGMPVDLESGGMNLKGFKKLEALLSNATALVVGPGMGRSQATTALLTEVFSKTRLPLVIDADALQQPWINELQTPAILTPHTGEFNRIGAGCDLKTLVSRTGTTVVLKGPTTRVMGSDGNTYLSFYGGPVLARGGSGDLLAGLIGGLLAQTPHDLPLAAARGVVWHGMAADLLARSQGQTATRITELLTEL
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: SQEALMLESTLFNGDTDKEWQAMRKAGSKVGCEILRDYSECGVLPESPHLLVLVGKGHNGGDALIAAHTILEHVTDAQIDVLFVFGERTLKPLAARAWQELQEFKVNQVHIILLTTLKKSYTLSLDGIFGASYCSPLPSQVALLIEQVNALSVDLRAAVDLPSGLNEKSAFKADFTYATGCVKSEILACSNAGRIRYLDLGFFNPGE
type: DOMAIN
name: YjeF_N_dom
description: YjeF N-terminal domain
Protein sequence:
MSDVENQPFFNIQRIYLKDLSLEQPNSPAIFLEQEMPAVEVEVDVKAERLADTVYEIVVAGTVTAKVREKVAFLVEAKQAGIFDIRNIPAEQIDPLCGIACPTILFPYLRSNIADSITRAGFPPIHLAEINFQALYEQRLAEIAQQQGGAPNGTTLN

Annotated regions:
Protein sequence:
MAGVLFANLPCSLQLSPKVPFRQSTNILIPFHKRSSFGFNAQHCVRSHLRLRWNCVGIHASAAETRPDQLPQEERFVSRLNADYHPAVWKDDFIDSLTSPNSHATSKSSVDETINKRIQTLVKEIQCMFQSMGDGETNPSAYDTAWVARIPSIDGSGAPQFPQTLQWILNNQLPDGSWGEECIFLAYDRVLNTLACLLTLKIWNKGDIQVQKGVEFVRKHMEEMKDEADNHRPSGFEVVFPAMLDEAKSLGLDLPYHLPFISQIHQKRQKKLQKIPLNVLHNHQTALLYSLEGLQDVVDWQEITNLQSRDGSFLSSPASTACVFMHTQNKRCLHFLNFVLSKFGDYVPCHYPLDLFERLWAVDTVERLGIDRYFKKEIKESLDYVYRYWDAERGVGWARCNPIPDVDDTAMGLRILRLHGYNVSSDVLENFRDEKGDFFCFAGQTQIGVTDNLNLYRCSQVCFPGEKIMEEAKTFTTNHLQNALAKNNAFDKWAVKKDLPGEVEYAIKYPWHRSMPRLEARSYIEQFGSNDVWLGKTVYKMLYVSNEKYLELAKLDFNMVQALHQKETQHIVSWWRESGFNDLTFTRQRPVEMYFSVAVSMFEPEFAACRIAYAKTSCLAVILDDLYDTHGSLDDLKLFSEAVRRWDISVLDSVRDNQLKVCFLGLYNTVNGFGKDGLKEQGRDVLGYLRKVWEGLLASYTKEAEWSAAKYVPTFNEYVENAKVSIALATVVLNSIFFTGELLPDYILQQVDLRSKFLHLVSLTGRLINDTKTYQAERNRGELVSSVQCYMRENPECTEEEALSHVYGIIDNALKELNWELANPASNAPLCVRRLLFNTARVMQLFYMYRDGFGISDKEMKDHVSRTLFDPVA

Annotated regions:
phrase: ESGFNDLTFTRQRPVEMYFSVAVSMFEPEFAACRIAYAKTSCLAVILDDLYDTHGSLDDLKLFSEAVRRWDISVLDSVRDNQLKVCFLGLYNTVNGFGKDGLKEQGRDVLGYLRKVWEGLLASYTKEAEWSAAKYVPTFNEYVENAKVSIALATVVLNSIFFTGELLPDYILQQVDLRSKFLHLVSLTGRLINDTKTYQAERNRGELVSSVQCYMRENPECTEEEALSHVYGIIDNAL
type: DOMAIN
name: Terpene_synthase_metal-bd
description: Terpene synthase, metal-binding domain

phrase: DWQEITNLQSRDGSFLSSPASTACVFMHTQNKRCLHFLNFVLSKFGDYVPCHYPLDLFERLWAVDTVERLGIDRYFKKEIKESLDYVYRYWDAERGVGWARCNPIPDVDDTAMGLRILRLHGYNVSSDVLENFRDEKGDFFCFAGQTQIGVTDNLNLYRCSQVCFPGEKIMEEAKTFTTNHLQNALAKNNAFDKWAVKKDLPGEVEY
type: DOMAIN
name: Terpene_synth_N
description: Terpene synthase, N-terminal domain

phrase: SNEKYLELAKLDFNMVQALHQKETQHIVSWWRESGFNDLTFTRQRPVEMYFSVAVSMFEPEFAACRIAYAKTSCLAVILDDLYDTHGSLDDLKLFSEAVRRWDISVLDSVRDNQLKVCFLGLYNTVNGFGKDGLKEQGRDVLGYLRKVWEGLLASYTKEAEWSAAKYVPTFNEYVENAKVSIALATVVLNSIFFTGELLPDYILQQVDLRSKFLHLVSLTGRLINDTKTYQAERNRGELVSSVQCYMRENPECTEEEALSHVYGIIDNALKELNWELANPASNAPLCVRRLLFNTARVMQLFYMYRDGFGISDKEMKDHVSRTLFDP
type: DOMAIN
name: Terpene_cyclase-like_1_C
description: Terpene cyclase-like 1, C-terminal domain
Protein sequence:
MAQHTVYFPDAFLTQMREAMPSTLSFDDFLAACQRPLRRSIRVNTLKTSVADFLRLTAPYGWTLTPIPWCEEGFWIERDDEDALPLGSTAEHLSGLFYIQEASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQIAARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAALPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRSGGTLVYSTCTLNREENESVCLWLKETYPDAVEFLPLGDLFPGANKALTEEGFLHVFPQIYDCEGFFVARLRKTQAIPALPTPKYKVGNFPFSPVKDREAAQIRQAAASVGLNWDGNLRLWQRDKEVWLFPVGIEALIGKVRFSRLGIKLAETHNKGYRWQHEAVIALASPDNENAFELTPQEAEEWYRGRDVYPQAAPVADDVLVTFQHQPIGLAKRIGSRLKNSYPRELVRDGKLFTSNA

Annotated regions:
phrase: FDAILLDAPCS
type: CONSERVED_SITE
name: RsmB/NOL1/NOP2-like_CS
description: RsmB/NOL1/NOP2-like, conserved site

phrase: FLAACQRPLRRSIRVNTLKTSVADFLRLTAPYGWTLTPIPWCEEGFWIERDDEDALPLGSTAEHLSGLFYIQEASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQIAARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAALPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRSGGTLVYSTCTLNREENESVCLWLKETYPDAVEFLPLGDLFPGANKALTEEGFLHVFPQIYDCEGFFVARLRK
type: DOMAIN
name: MeTrfase_RsmB-F_NOP2_dom
description: SAM-dependent methyltransferase RsmB-F/NOP2-type domain

phrase: IRVNTLKTSVADFLRLTAPYGWTLTPIPWCEEGFWIERDDEDALPLGSTAEHLSGLFYIQEASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQIAARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAALPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRSGGTLVYSTCTLNREENESVCLWLKETYPDAVEFLPLGDLFPGANKALTEEGFLHVFPQIYDCEGFFVARLR
type: DOMAIN
name: Nop2p
description: Nop2p

phrase: PQRVMDVAAAPGSKTTQIAARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAALPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRSGGTLVYSTCTLNREENESVCLWLKETYPDAVEFLPLGDLFPGANKALTEEGFLHVFPQIYDCEGFFVARL
type: DOMAIN
name: MeTrfase_RsmB-F_NOP2_cat
description: SAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic core

phrase: FSPVKDREAAQIRQAAASVGLNWDGNLRLWQRDKEVWLFPVGIEALIGKVRFSRLGIKLAETHNKGYRWQHEAVIA
type: DOMAIN
name: YebU_pre-PUA_dom
description: Ribosomal RNA small subunit methyltransferase F, pre-PUA domain

phrase: FPDAFLTQMREAMPSTLSFDDFLAACQRPLRRSIRVNTLKTSVADFLRLTAPYGWTLTPIPWCEEGFWIERDDEDALPLGSTAEHLSGLFYIQE
type: DOMAIN
name: Methyltr_RsmF_N
description: Ribosomal RNA small subunit methyltransferase F, N-terminal

phrase: AEEWYRGRDVYPQAAPVADDVLVTFQHQPIGLAKRIGSRLKNSYPRELV
type: DOMAIN
name: Nol1_Nop2_Fmu_2
description: rRNA small subunit methyltransferase F, RNA-binding PUA-like domain
Protein sequence:
MIRIGQGYDVHKLDYDRELIIGGIKIPYEKGLLGHSDADVLLHAITDAIIGAIGALDIGHFFPDTDMAYKDADSAELLAEIWRQVEAEGFKLGNLDATIIAEKPKMAPYVELMKRRIAELLHAEPSQVNVKATTTEKLGFTGREEGIASLAVVLLEK

Annotated regions:
phrase: RIGQGYDVHKLDYDRELIIGGIKIPYEKGLLGHSDADVLLHAITDAIIGAIGALDIGHFFPDTDMAYKDADSAELLAEIWRQVEAEGFKLGNLDATIIAEKPKMAPYVELMKRRIAELLHAEPSQVNVKATTTEKLGFTGREEGIASLAVVLLE
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RIGQGYDVHKLDYDRELIIGGIKIPYEKGLLGHSDADVLLHAITDAIIGAIGALDIGHFFPDTDMAYKDADSAELLAEIWRQVEAEGFKLGNLDATIIAEKPKMAPYVELMKRRIAELLHAEPSQVNVKATTTEKLGFTGREEGIASLAVVL
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: SDADVLLHAITDAII
type: CONSERVED_SITE
name: MECDP_synthase_CS
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site

phrase: IRIGQGYDVHKLDYDRELIIGGIKIPYEKGLLGHSDADVLLHAITDAIIGAIGALDIGHFFPDTDMAYKDADSAELLAEIWRQVEAEGFKLGNLDATIIAEKPKMAPYVELMKRRIAELLHAEPSQVNVKATTTEKLGFTGREEGIASLAVVLLE
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: IRIGQGYDVHKLDYDRELIIGGIKIPYEKGLLGHSDADVLLHAITDAIIGAIGALDIGHFFPDTDMAYKDADSAELLAEIWRQVEAEGFKLGNLDATIIAEKPKMAPYVELMKRRIAELLHAEPSQVNVKATTTEKLGFTGREEGIASLAVVLLE
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: IRIGQGYDVHKLDYDRELIIGGIKIPYEKGLLGHSDADVLLHAITDAIIGAIGALDIGHFFPDTDMAYKDADSAELLAEIWRQVEAEGFKLGNLDATIIAEKPKMAPYVELMKRRIAELLHAEPSQVNVKATTTEKLGFTGREEGIASLAVVL
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Protein sequence:
MNWVNDSIIQEFILLGFSDRPWLEFPLLVVFLISYTVTIFGNLTIILVSRLDTKLHTPMYFFLTNLSLLDLCYTTCTVPQMLVNLCSIRKVISYRGCVAQLFIFLALGATEYLLLAVMSFDRFVAICRPLHYSVIMHQRLCLQLAAASWVTGFSNSVWLSTLTLQLPLCDPYVIDHFLCEVPALLKLSCVETTANEAELFLVSELFHLIPLTLILISYAFIVRAVLRIQSAEGRQKAFGTCGSHLIVVSLFYSTAVSVYLQPPSPSSKDQGKMVSLFYGIIAPMLNPLIYTLRNKEVKEGFKRLVARVFLIKK

Annotated regions:
phrase: GNLTIILVSRLDTKLHTPMYFFLTNLSLLDLCYTTCTVPQMLVNLCSIRKVISYRGCVAQLFIFLALGATEYLLLAVMSFDRFVAICRPLHYSVIMHQRLCLQLAAASWVTGFSNSVWLSTLTLQLPLCDPYVIDHFLCEVPALLKLSCVETTANEAELFLVSELFHLIPLTLILISYAFIVRAVLRIQSAEGRQKAFGTCGSHLIVVSLFYSTAVSVYLQPPSPSSKDQGKMVSLFYGIIAPMLNPLI
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM
Protein sequence:
MAIHSSFEALAYQSGFANQFSSEALPGALPMGQNSPQKHPLGLYAEQFSGTAFTVARNEARRTWLYRIKPSAAHPRYQRMDRQITGREQGPINPNRLRWNAFDIPAEPVDFIDGLIALASTSAADQAEGVSVYVYAANTSMQRAFFSADGEWLIVPQQGRLRIITEMGVLDIGPLEIAVLPRGLKFSVQLLDGSARGYLCENHGGVLRLPELGPIGSNGLANPRDFLTPVAWFEERDEPVQLVQKFLGELWTTQLQHSPFDVVGWHGNNVPYTYDLRRFNTIGTVSYDHPDPSIFTVLTSPGAVHGQANIDFVIFPPRWMVAENTFRPPWFHRNLMNEFMGLIDGAYDAKAEGFMPGGSSLHNCMSAHGPDNITAEKAIAADLKPHKIENTMAFMFETGKVLRPSLHALACPQLQADYDACWNGMARTFNKESS

Annotated regions:
phrase: AYQSGFANQFSSEALPGALPMGQNSPQKHPLGLYAEQFSGTAFTVARNEARRTWLYRIKPSAAHPRYQRMDRQITGREQGPINPNRLRWNAFDIPAEPVDFIDGLIALASTSAADQAEGVSVYVYAANTSMQRAFFSADGEWLIVPQQGRLRIITEMGVLDIGPLEIAVLPRGLKFSVQLLDGSARGYLCENHGGVLRLPELGPIGSNGLANPRDFLTPVAWFEERDEPVQLVQKFLGELWTTQLQHSPFDVVGWHGNNVPYTYD
type: DOMAIN
name: HgmA_N
description: Homogentisate 1,2-dioxygenase, N-terminal domain

phrase: RRFNTIGTVSYDHPDPSIFTVLTSPGAVHGQANIDFVIFPPRWMVAENTFRPPWFHRNLMNEFMGLIDGAYDAKAEGFMPGGSSLHNCMSAHGPDNITAEKAIAADLKPHKIENTMAFMFETGKVLRPSLHALACPQLQADYDACWNGMART
type: DOMAIN
name: HgmA_C
description: Homogentisate 1,2-dioxygenase, C-terminal domain
Protein sequence:
MRAMGIQRNCQSLWRWGIMILGMIIICSAAGNLWVTVYYGVPVWKDAETTLFCASDAKAYTTEVHNVWATHACVPTDPNPQEINLENVTEKFNMWKNNMVEQMHTDIISLWDQSLQPCVKLTPLCVTLNCSDVNVNATNYNVNDTINMKEEIRNCSFNMTTELRDRKQKVYSLFYRLDVVQMNNSNNSNQYRLINCNTSAITQACPKVSFEPIPIHYCAPAGYAILKCKDKEFNGTGLCKNVSTVQCTHGIKPVVSTQLLLNGSLAESKVMIRSENITNNAKNILVQLTSPVNISCIRPNNNTRKSVRIGPGQAFYATGEIIGNIRQAYCNVNRSEWNEALREVVKQLRTYFNKTIIFDNSSGGDLEITTHSFNCGGEFFYCNTSRLFNSTWNDTTSMLNDTKPNDTITLPCRIKQIINMWQRAGQAIYAPPIQGVIRCESNITGLILTRDGGGNSSVSSETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVEREKRAVGLGAVFIGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHLLKLTVWGIKQLQARVLALERYLRDQQILGIWGCSGKLICTTNVPWNSSWSNKSQSEIWENMTWLQWDKEISNYTHIIYTLLEESQIQQEKNEQDLLALDKWANLWNWFDITNWLWYIKIFIMIVGGLIGLRIVFTVLSIINRVRQGYSPLSFQTHTPNPGGLDRPRRIEEEGGEQDRDRSIRLVGGFLTLVWDDLRSLCLFSYHRLRD

Annotated regions:
phrase: VQARQLLSGIVQQQSNLLRAIEAQQHLLKLTVWGIKQLQARVLALERYLRDQQILGIWGCSGKLICTTNVPWNSSWSNKSQSEIWENMTWLQWDKEISNYTHIIYTLLEESQIQQEKNEQDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHLLKLTVWGIKQLQARVLALERYLRDQQILGIWGCSGKLICTTNVPWNSSWSNKSQSEIWENMTWLQWDKEISNYTHIIYTLLEESQIQQEKNEQDLLALDKWANLWNWFDITNWLWYIKIFIMIVGGLIGLRIVFTVLSIINRVRQGYSPLSFQ
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: KEEIRNCSFNMTTELRDRKQKVYSLFYRLDVVQMNNSNNSNQYRLINCNTSAITQACPKVSFEPIPIHYCAPAGYAILKCKDKEFNGTGLCKNVSTVQCTHGIKPVVSTQLLLNGSLAESKVMIRSENITNNAKNILVQLTSPVNISCIRPNNNTRKSVRIGPGQAFYATGEIIGNIRQAYCNVNRSEWNEALREVVKQLRTYFNKTIIFDNSSGGDLEITTHSFNCGGEFFYCNTSRLFNSTWNDTTSMLNDTKPNDTITLPCRIKQIINMWQRAGQAIYAPPIQGVIRCESNITGLILTRDGGGNSSVSSETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: LWVTVYYGVPVWKDAETTLFCASDAKAYTTEVHNVWATHACVPTDPNPQEINLENVTEKFNMWKNNMVEQMHTDIISLWDQSLQPCVKLTPLCVTLNCSDVNVNATNY
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MNNSVTRLLFKRLLTLQLCHHFDIIPHRDQSFDCVQMQQPQNETANNFIPSIQLLWSTDPPQIRPDGTYPQAVELFPCFKDKWNTKEEILNIILAANADPKSNCVTVQSSPRPCSSSQFIYPRLDNAWYKNDGYIWKKRTNGKQNREDHLNLKISGHPHISAKYIHSAIVPTFHRRSYSVPDSDCHVLVHYLNVKTNNKIDDQAEEIARSMIENKVFISLSQLHDQLSPIFLQTLNVNQLVAEINEHLKKKGVNLPTSPLPQEPSSSTSRELERRNSCSSAFRKGLSSVALRRQPSANSEIDANHIGTMLKRFGCNGSSSDRISIIQPTMQNFQSIRSHQNHVAMESRSPSGDGDSRPITFEEDASYQQLSIKSSTNVSTPASAFAEKMKIRSGSQESPMGPPSSSSVTSTSLIPIIEMTPSSSSLKGGQKMLVVGGYYRKGHEYKISFGRGRMMPAVLIHAGVLSCVIPPSAKPEVVQIRVFCNGQAISTASEFTYEPQSAHLIKENDDTLVQIFEKIRIMACAFNAYSSIENIQSSSCMESLLANIVQQIDNEVSSQNLNYKTELLNGSAHFPSKTVLHLVASLDYDRLFEALIDLSRKVPACREFDIFARDNDGSTPLHTACKNSASRIARLIISIDSSAIDVVDDRGRTPVEVAPEHSIDMLSDKNNEEERVNATELWVMTNGKAFTTDKILDGKISRAPIAEKPDDLLREATSSYSIMSEMYEGPMLQAGTSRECDEDCESCCDPDSTQQLHVEIAMDTDVHVPDSPKMARLFHAVTSPGIVVPPNARARMADLARQIIEALPDRIKRNSEVSMCPDEEDPGQNHHGGVEPMFYQQASCSMSTDSPNMMDDYFDMMATETRNDIFTEPRSTETTETSASKSAQLFATHCNFFDDRSFASSSTRANTFESDTLDFDKDLGEFFTIHVDRFVDPIQQRLANLKYNDDEQRDVYEAAMVIQRAYRVYRARSTTRRQEDIERRAALKIQGCYRRYKQFCYFKKLHNAAIVVQKHFRMRKRDDKEEGAVEAVIASVPEHPTLDGQSICIQVPKTNSTMLRERAATTIQVAYRYRHRKRQAAARKIQNFMRQNRNNVNIDDGHTQHLIAENACAKRRRYVACPQTSGDQRNKRDSDGERKRDAHHDAPEFIPIGATPSSTTIPHRPTQRHHPWDQLKPPYGCGTLA

Annotated regions:
phrase: FKDKWNTKEEILNIILAANADPKSNCVTVQSSPRPCSSSQFIYPRLDNAWYKNDGYIWKKRTNGKQNREDHLNLKISGHPHISAKYIHSAIVPTFHRRSYSVPDSDCHVLVHYLN
type: DOMAIN
name: CG-1_dom
description: CG-1 DNA-binding domain

phrase: AVELFPCFKDKWNTKEEILNIILAANADPKSNCVTVQSSPRPCSSSQFIYPRLDNAWYKNDGYIWKKRTNGKQNREDHLNLKISGHPHISAKYIHSAIVPTFHRRSYSVPDSDCHVLVHYLNVKTNNK
type: DOMAIN
name: CG-1_dom
description: CG-1 DNA-binding domain

phrase: LFPCFKDKWNTKEEILNIILAANADPKSNCVTVQSSPRPCSSSQFIYPRLDNAWYKNDGYIWKKRTNGKQNREDHLNLKISGHPHISAKYIHSAIVPTFHRRSYSVPDSDCHVLVHYLNV
type: DOMAIN
name: CG-1_dom
description: CG-1 DNA-binding domain

phrase: DVYEAAMVIQRAYRVYRARSTT
type: BINDING_SITE
name: IQ_motif_EF-hand-BS
description: IQ motif, EF-hand binding site

phrase: KLHNAAIVVQKHFRMRKRD
type: BINDING_SITE
name: IQ_motif_EF-hand-BS
description: IQ motif, EF-hand binding site

phrase: IERRAALKIQGCYRRYKQFCYF
type: BINDING_SITE
name: IQ_motif_EF-hand-BS
description: IQ motif, EF-hand binding site

phrase: LRERAATTIQVAYRYRHRKRQ
type: BINDING_SITE
name: IQ_motif_EF-hand-BS
description: IQ motif, EF-hand binding site
Protein sequence:
MHTRAIYPGTFDPITNGHADLIERAAKLFKHVIIGIAANPSKQPRFTLEERVELVNRVTAHLDNVEVVGFSGLLVDFAKEQRASVLVRGLRAVSDFEYEFQLANMNRRLSPDLESVFLTPAEENSFISSTLVKEVALHGGDVSQFVHPEVASALAAKLNLAKA

Annotated regions:
phrase: IYPGTFDPITNGHADLIERAAKLFKHVIIGIAANPSKQPRFTLEERVELVNRVTAHLDNVEVVGFSGLLVDFAKEQRASVLVRGLRAVSDFEYEFQLANMNRRLSPDLESVFLTPAEENSFISSTLVK
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: RAIYPGTFDPITNGHADLIERAAKLFKHVIIGIAANPSKQPRFTLEERVELVNRVTAHLD
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain
Protein sequence:
MEDGTPKHIIQMTGFKMEEKEALVKLLLKLDCTFIKSEKYKNCTHLIAERLCKSEKFLAACAAGKWILTKDYIIHSAKSGRWLDETTYEWGYKIEKDSRYSPQMQSAPKRWREELKRTGAPGAFHRWKVVLLVRTDKRSDSLIRVLEAGKANVILPKSSPSGITHVIASNARIKAEKEKDNFKAPFYPIQYLGDFLLEKEIQNDEDSQTNSVWTEHSNEETNKDFRKDAGFLEMKGALRETMYRTQKEMQNHEDVNVGSILIQHHKKEKFSGSSKDLKFVKMRNTFGSHTYENQKEIKKKDEDIQRSYTLRRKRKKGKESNCKKGVEHEKIKSTLRRHIYNRDQKEMKNSIFAEYAKESKAMAIKTDVDVVEIKNTLRKHIYRAQAVRYNCIRIDKQPVYNVEVKNAEFPRGVLNLIESLIEGHFFKEAIEELSTLQAHYIPPVCVLHALLENVLQDNIDTFSGRYFHILSALLHLHPPWKSPAMSRYYLELFQCPTCMKGAWSLVEVLIRSCLFNESFCHQISENIGSKVLHLTLLKFFFNLIESEVQHLSQKLYDWSDSQNLKITGKAMLLEIFWSGSETSGLLTKPVNMLLEWTIYSHKEKFKSNDVFKHELAYLLAGILGAAIDYWIFLGLKMGRNVMRHMSDDLGSYVSLSCDDFSSQELEIFICSFSSSWLQMFVAEAVFKKLCLQSSGSVSSEPLSLQKMVYSYLPALGKTGVLGSGKIQVSKKIGQRPCFDSQRTLLMLNGTKQKQVEGLPELLDLNLAKCSSSLKKLKKKSEGELSCSKENCPSVVKKMNFHKTNLKGETALHRACINNQVEKLILLLSLPGIDINVKDNAGWTPLHEACNYGNTVCVQEILQRCPEVDLLTQVDGVTPLHDALSNGHVEIGKLLLQHGGPVLLQQRNAKGELPLDYVVSPQIKEELFAITKIEDTVENFHAQAEKHFHYQQLEFGSFLLSRMLLNFCSIFDLSSEFILASKGLTHLNELLMACKSHKETTSVHTDWLLDLYAGNIKTLQKLPHILKELPENLKVCPGVHTEALMITLEMMCRSVMEFS

Annotated regions:
phrase: EDGTPKHIIQMTGFKMEEKEALVKLLLKLDCTFIKSEKYKNCTHLIAERLCKSEKFLAACAAGKWILTKDYIIHSAKS
type: DOMAIN
name: BRCT_dom
description: BRCT domain

phrase: PGAFHRWKVVLLVRTDKRSDSLIRVLEAGKANVILPKSSPSGITHVIASNARIKAEKEKDNFKAPFYPIQYLGDFLLE
type: DOMAIN
name: BRCT_dom
description: BRCT domain

phrase: TPKHIIQMTGFKMEEKEALVKLLLKLDCTFIKSEKYKNCTHLIAERLCKSEKFLAACAAGKWILTKDYIIHSAKSGRWLD
type: DOMAIN
name: BRCT_SLF1
description: SMC5-SMC6 complex localization factor protein 1, BRCT domain

phrase: DGVTPLHDALSNGHVEIGKLLLQHGGPVLLQQ
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: IQMTGFKMEEKEALVKLLLKLDCTFIKSEKYKNCTHLIAERLCKSEKFLAACAAGKWILTKDYIIHSAKSGRWLDETT
type: DOMAIN
name: BRCT_dom
description: BRCT domain

phrase: KGETALHRACINNQVEKLILLLSLPGIDINVKD
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: LHRACINNQVEKLILLLSLPGIDINVKDNAGWTPLHEACNYGNTVCVQEILQRCPEVDLLTQVDGVTPLHDALSNGHVEIGKLLLQH
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: AGWTPLHEACNYGNTVCVQEILQRCPEVDLLT
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: AGWTPLHEACNYGNTVCVQEILQRCPEVD
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: KGETALHRACINNQVEKLILLLSLPGIDIN
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: DGVTPLHDALSNGHVEIGKLLLQHGGPVL
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat
Protein sequence:
MVRALIRRVLGRQENDQSTPQLELPPTDSRDRARSMVMGLQDEICAGLEALDGEGRFQEESWVRPEGGGGRSRVMREGRVFEQGGVNFSEVQGNELPPSILKQRPEAKGHPWFATGTSMVLHPRNPYIPTVHLNYRYFEAGPVWWFGGGADLTPYYPFLDDARHFHRTHQQACNSVHPNLHKVFKPWCDEYFYLKHRNETRGVGGIFYDYQDSRGTLYKGQDPTGAAAKVSSELGATPLSWEQLFSLGQANGRAFLPSYAPIVEKRHATSYGDRERDFQLYRRGRYVEFNLVWDRGTIFGLQTNGRTESILMSLPPLVRWEYGYTAEAGSREALLTDLFTTPQDWLGDPSLEERCRPHQAIN

Annotated regions:
phrase: KPWCDEYFYLKHRNETRGVGGIFY
type: CONSERVED_SITE
name: Coprogen_oxidase_CS
description: Coproporphyrinogen III oxidase, conserved site
Protein sequence:
MRVAFLVDSVSNLKESQAQHLYVLPLFIIESTPEAETTFSSGFDIDLKTLTDKMANAPKGVKFSTSQTTEEIVRAKVSELVEQYDLIIGIPIDKEISASYANWKLVEKDYASKFHVLDARAVEMIIDWLINDIKGWLNTNPYSREGLDRFVEQYRKKTAAVLFVTDTKPLVAGGRLSNLKSFIIKSLKFHLLISFLGENGKLQFFDKARSAHDAHKLAVKFLKKQLLKHSAKLKRGAFLTTVFDEQTNTNLVQEFDKLLDHSINIEQSLLSPVICTHTGLNSYVIVLQGE

Annotated regions:
Protein sequence:
MIRKDAKRSALVLFSGGQDSATCLAWALERYETVETLGFDYGQRHRVELECREGFRNAVARAFPAWAERLGDDHMIDLSVLGAISDTAMTREIEIEATANGLPNTFVPGRNLMFMTIAAAIAYRRGLQVLVGGMCETDFSGYPDCRDDTMKALQVALNLGMDTRVLLETPLMWLDKGDTWRLAHQLGGDELVELVRVETHTCYVGERAELHAWGFGCGECPACRLRKRGYEAYLSGEKVTEAPV

Annotated regions:
Protein sequence:
MDSSLKTQEPQVVETSPSPVAQEPPQVADKPAIVPSPIAQEPDNDVPAPGNEFAEFAAGCFWGVELAFQRIPGVTVTEVGYTHGISHNPSYEDVCTNTTNHAEVVRVQYDPKECTYETLLDLFWSRHNPTTLNRQGELLGAQYRSGIYFYTPEQEKLARESLEKEQKKLEDKIVTEILPAKKFYKAEEYHQQYLVKGGMHGNAQSPAKSCKDPIRCYG

Annotated regions:
phrase: EFAAGCFWGVELAFQRIPGVTVTEVGYTHGISHNPSYEDVCTNTTNHAEVVRVQYDPKECTYETLLDLFWSRHNPTTLNRQGELLGAQYRSGIYFYTPEQEKLARESLEKEQKKLEDKIVTEILPAKKFYKAEEYHQQYLV
type: DOMAIN
name: Met_Sox_Rdtase_MsrA_dom
description: Peptide methionine sulphoxide reductase MsrA domain

phrase: NEFAEFAAGCFWGVELAFQRIPGVTVTEVGYTHGISHNPSYEDVCTNTTNHAEVVRVQYDPKECTYETLLDLFWSRHNPTTLNRQGELLGAQYRSGIYFYTPEQEKLARESLEKEQKKLEDKIVTEILPAKKFYKAEEYHQQYLVKGGMHGNAQSPA
type: DOMAIN
name: Met_Sox_Rdtase_MsrA_dom
description: Peptide methionine sulphoxide reductase MsrA domain

phrase: FAEFAAGCFWGVELAFQRIPGVTVTEVGYTHGISHNPSYEDVCTNTTNHAEVVRVQYDPKECTYETLLDLFWSRHNPTTLNRQGELLGAQYRSGIYFYTPEQEKLARESLEKEQKKLEDKIVTEILPAKKFYKAEEYHQQYLVK
type: DOMAIN
name: Met_Sox_Rdtase_MsrA_dom
description: Peptide methionine sulphoxide reductase MsrA domain
Protein sequence:
MRECISVHIGQAGIQVGNACWELYCLEHGIQPDGQVPGDKTAGHHDDAFSTFFSQTGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVEYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLDIERPNYSNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISSAKAFHEQLSVAEITSSAFEPASMMVKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQAPTVVPGADLAKVQRAVCMISNSTSVVEVFSRINSKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVAAEGGSDDGDEEEEY

Annotated regions:
phrase: LNVDVNEFQTNLVPYPRIHFMLSSYAPVISSAKAFHEQLSVAEITSSAFEPASMMVKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQAPTVVPGADLAKVQRAVCMISNSTSVVEVFSRIN
type: DOMAIN
name: Tubulin/FtsZ_2-layer-sand-dom
description: Tubulin/FtsZ, 2-layer sandwich domain

phrase: GGGTGS
type: CONSERVED_SITE
name: Tubulin_CS
description: Tubulin, conserved site

phrase: FSTFFSQTGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVEYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDICRRSLDIERPNYSNLNRLVSQVISSLTASLRFD
type: DOMAIN
name: Tubulin_FtsZ_GTPase
description: Tubulin/FtsZ, GTPase domain

phrase: ECISVHIGQAGIQVGNACWELYCLEHGIQPDGQVPGDKTAGHHDDAFSTFFSQTGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVEYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVSILLDNEAIYDI
type: DOMAIN
name: Tubulin_FtsZ_GTPase
description: Tubulin/FtsZ, GTPase domain

phrase: PRIHFMLSSYAPVISSAKAFHEQLSVAEITSSAFEPASMMVKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQAPTVVPGADLAKVQRAVCMISNSTSVVEVFSRI
type: DOMAIN
name: Tubulin/FtsZ_2-layer-sand-dom
description: Tubulin/FtsZ, 2-layer sandwich domain
Protein sequence:
GLLGAPAVATYAAAPAVAYSAAPAVSTAYINQAAPVLAHAGPVAVAHAAPYAVHAPAVGASHQAIVRSLGGNQAVSHYSKAVDSAFSSVRKFDTRITNDALLHAPVAVAHAAPVVSTYAAHAPVVSSYAHAPLVSSYAAHAPLVSSYAAHAPLVSSYAAHAPVLSTAYAAHAPVVSSYAAPVVARTAAVGYSPAAVVSHTSFTGLGASYAW

Annotated regions:
Protein sequence:
MYGIDIELSDYRIGSETISSGDDGYYEGCACDKDASTNAYSYDKCRVVRGTWRPSELVLYVGDEHVACRDVASGMHHGNLPGKVYFIEAEAGRAATAEGGVYTTVVEALSLVQEEEGTGMYLINAPEKAVVRFFKIEKSAAEEPQTVDPSVVESATGSGVDTQEEQEIDQEAPAIEEVETEEQEVILEEGTLIDLEQPVAQVPVVAEAELPGVEAAEAIVPSLEENKLQEVVVAPEAQQLESAPEVSAPAQPESTVLGVAEGDLKSEVSVEANADVAQKEVISGQQEQEIAEALEGTEAPVEVKEETEVLLKEDTLIDLEQPVAQVPVVAEAELPGVEAAEAIVPSLEENKLQEVVVAPEAQQLESAPEVSAPAQPESTVLGVTEGDLKSEVSVEADAGMQQEAGISDQETQATEEVEKVEVSVETKTEEPEVILEEGTLIDLEQPVAQVPVVAEAELPGVEAAEAIVPSLEENKLQEVVVAPEAQQLESAPEVSAPVQPESTVLGVTEGDLKSEVSVEADAGMQQEAGISDQETQATEEVEKVEVSVEADAGMQQELVDVPTALPLKDPDDEDVLSY

Annotated regions:
Protein sequence:
MNPFWSMSTNAGRKRSDGEEQSGSGEQRASPARPPFGKKQLPSIPKNAVPITKAASPASSTQSANGTHASYGPFYLEYSLLAEFTLVIKQKLPGIYVQPSYRSALMWFGVIFIRHGLYQDGVFKFTVYIPDNYPDGDCPKVVFDTPVFHPLVDPVSGELDVRRAFTKWRRNHNHIWQVLMYARTIFYKINTMEPLNPEAAVLYDKDIQLFKSKVVDSVKLCNSHLFDQPKIDDPYAISFSPWNPAVHEEAKEKMFAHKRRPEDFNKGLPVSGLSWVKPGSTQPFSKEDNPLQT

Annotated regions:
phrase: AEFTLVIKQKLPGIYVQPSYRSALMWFGVIFIRHGLYQDGVFKFTVYIPDNYPDGDCPKVVFDTPVFHPLVDPVSGELDVRRAFTKWRRNHNHIWQVLMYARTIFYKINTMEPLNPEAAVLYDKDIQLFKSKV
type: DOMAIN
name: UBQ-conjugat_E2_core
description: Ubiquitin-conjugating enzyme E2, catalytic core domain

phrase: YLEYSLLAEFTLVIKQKLPGIYVQPSYRSALMWFGVIFIRHGLYQDGVFKFTVYIPDNYPDGDCPKVVFDTPVFHPLVDPVSGELDVRRAFTKWRRNHNHIWQVLMYARTIFYKINTMEPLNPEAAVLYDKDIQLFKSKVVDSVKLCN
type: DOMAIN
name: UBQ-conjugat_E2_core
description: Ubiquitin-conjugating enzyme E2, catalytic core domain