nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MLNISKIFEEVKVMKNFTLNFGPQHPAAHGVLRLIVELESENVVRVEPHIGLLHRGTEKLIEGKTYTQALPYFDRLDYVSMNVQEHAYSLAVERLYLDSLDIELEIPQRAKVIRVLFSEITRVLNHIMATTTHAMDVGALTPFLWAFEEREKLMEFYERVSGARMHAAYIRPGGVAFDLPMNISEDIYKFVIQYRKRLEEIEDMLINNRIWKQRLVDIGIVSAEEALNYGFTGPLLRGAGIVYDIRKNYPYDDYDKYDFKIIIGEENNSYTRFIIRMKEMYQSLSIIEQALNNLRPGLIKLEGVNITAPDRAFVKKDMESCINHFKFFSEGFIIPANENYTIVEAPKGEFGIYLNANDTAKPYRCRIKAPGFLHLQGLNMMSKDHLLADVVTLIGTQDIVFGEVDR

Annotated regions:
phrase: DVGALTPFLWAFEEREKLMEFYERVSGARMHAAYIRPGGVAFDLPMNISEDIYKFVIQYRKRLEEIEDMLINNRIWKQRLVDIGIVSAEEALNYGFTGPLLRGAGIVYDIRKNYPYDDYDKYDFKIIIGEENNSYTRFIIRMKEMYQSLSIIEQALNNLRPGLIKLEGVNITAPDRAFVKKDMESCINHFKFFSEGFIIPANENYTIVEAPKGEFGIYLNANDTAKPYRCRIKAPGFLHLQGLNMMSKDHLLADVVTLIGTQDIVFGEVD
type: DOMAIN
name: NADH_Q_OxRdtase_suD
description: NADH-quinone oxidoreductase, subunit D

phrase: LHRGTEKLIEG
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_49kDa_CS
description: NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site
Protein sequence:
MSKERPKRNIIQKKYDDSDGIPWSEERVVRKVLYLSLKEFKNAQKRQHGEGLAGSLKAVNGLLGNAQAKALGPASEQSENEKDDASQVSSTSNDVSSSDFEEGPSRKRPRLQAQRKFAQSQPNSPSTTPVKIVEPLLPPPATQISDLSKRKPKTEDFLTFLCLRGSPALPNSMVYFGSSQDEEDVEEEDDETEDVKATTNNASSSCQSTPRKGKTHKHVHNGHVFNGSSRSAREKEPAHKHRSKEATPGKEKHSEPRADSRREQASGAQPTAASAAASSAKGLAANHQPPPSHRSAQDLRKQVSKVNGVTRMSSLGAGTNSAKKIREVRPSPSKTVKYTATVTKGTVTYTKAKRELVKETKPNHHKPSSAVNHTISGKTESSNAKTRKQVLSLGGASKSTGPAASGLKASSRLNPKSCTKEVGGRQLREGLRNSKRRLEEAQQVDKPQSPPKKMKGVAGNAEAPGKKASAASGEKSLLNGHVKKEVPERSLERNRPKRAAAGKNMLGKQAHGKTEGTPCENRSTSQPESSHKPHDPQGKPEKGSGKSGWAAMDEIPVLRPSAKEFHDPLIYIESVRAQVEKYGMCRVIPPPDWRPECKLNDEMRFVTQIQHIHKLGRRWGPNVQRLACIKKHLRSQGITMDELPLIGGCELDLACFFRLINEMGGMQQVTDLKKWNKLADMLRIPKTAQDRLAKLQEAYCQYLLSYDSLSPEEHRRLEKEVLMEKEILEKRKGPLEGHTESDHHKFHSLPRFEPKNGLVHGVTPRNGF

Annotated regions:
phrase: WGPNVQRLACIKKHLRSQGITMDELPLIGGCELDLACFFRLINEMGGMQQVTDLKKWNKLADMLRIPKTAQDRLAKLQEAYCQYLLSYDSLS
type: DOMAIN
name: ARID_dom
description: ARID DNA-binding domain

phrase: GPNVQRLACIKKHLRSQGITMDELPLIGGCELDLACFFRLINEMGGMQQVTDLKKWNKLADMLRIPKTAQDRLAKLQEAYCQYLLSYDSLSP
type: DOMAIN
name: ARID_dom
description: ARID DNA-binding domain

phrase: PVLRPSAKEFHDPLIYIESVRAQVEKYGMCRVI
type: DOMAIN
name: JmjN
description: JmjN domain

phrase: LACIKKHLRSQGITMDELPLIGGCELDLACFFRLINEMGGMQQVTDLKKWNKLADMLRIPKTAQDRLAKLQEAYCQYLLSY
type: DOMAIN
name: ARID_dom
description: ARID DNA-binding domain

phrase: EIPVLRPSAKEFHDPLIYIESVRAQVEKYGMCRVIPPPDWR
type: DOMAIN
name: JmjN
description: JmjN domain

phrase: IPVLRPSAKEFHDPLIYIESVRAQVEKYGMCRVIPPPDWRP
type: DOMAIN
name: JmjN
description: JmjN domain
Protein sequence:
MTIRAVVRGVGHYLPARVVENAEFEGKLDTTDEWIRSRTGIERRHFAAEGETTSQLAIKAAAAALADAGLSAADIDAIVVATSTPDFTFPSVATMVQAGLGNTNAFAFDVQAVCAGFVFALANANGMILSGQAKRVLVIGAETFSRIMDWADRGTCVLFGDGAGAVILEAAEGAGTAADRGILASDLHSDGRYRELLYVDGGVSTNGQSGHLRMQGNAVFKHAVQKLAETAHAALAKAGLTPEDVSWIVPHQANLRIITATAERMGVPMERVVVTVADHGNTSAASIPLALSTARARGQIKAGDLIVTEAIGGGLAWGSVVLRW

Annotated regions:
phrase: FDVQAVCAGFVFALANANGMILSGQAKRVLVIGAETFSRIMDWADRGTCVLFGDGAGAVILEAAEGAGTAADRGILASDLHSD
type: DOMAIN
name: ACP_syn_III_N
description: Beta-ketoacyl-[acyl-carrier-protein] synthase III, N-terminal

phrase: LAKAGLTPEDVSWIVPHQANLRIITATAERMGVPMERVVVTVADHGNTSAASIPLALSTARARGQIKAGDLIVTEAIGGGLAWGSVVLR
type: DOMAIN
name: ACP_syn_III_C
description: Beta-ketoacyl-[acyl-carrier-protein] synthase III, C-terminal
Protein sequence:
MADPLHVIVLAAGEGKRMKSMLPKVLMPLAGEPLLAHVLDTARALRPEGLHVVYGHRGEQVRTAFARDTDIHWVHQQEQRGTGHAVRMALHDIPDPARVLVLYGDVPLLRAETLRELVLTHAELAVLAAELSNPTGYGRVLRDGLGRVRAIVEDRDLDASQRDIRIVNTGVTFAESRLLRGWVGRLSPNNLQGELYLTDVFALAAEDGTPADVVMTADAIEAFGANDPAQLAGLAAYLRLRDATRLMLAGVRIADPARFDLRGHFSHGRDVEIDVDVILEDGVTFGDGVKVGPFCRLRNVNLAAGTEVLAHCDLEGVTTYGACKIGPFARLRPGTELAAGVHVGNFVETKKAKLGEGSKANHLTYLGDARVGAGVNIGAGTITCNYDGVNKHLTEIGDGAFIGSNTALVAPVRVGDHATIGAGSTITADAPADKLTLARGRQATIQDWERPHKDEPRE

Annotated regions:
phrase: TEIGDGAFIGSNTALVAPVRVGDHATIGAGSTI
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: VIVLAAGEGKRMKSMLPKVLMPLAGEPLLAHVLDTARALRPEGLHVVYGHRGEQVRTAFARDTDIHWVHQQEQRGTGHAVRMALHDIPDPARVLVLYGDVPLLRAETLRELVLTHAELAVLAAELSNPTGYGRVLRDGLGR
type: DOMAIN
name: MobA-like_NTP_Trfase
description: MobA-like NTP transferase

phrase: GVRIADPARFDLRGHFSHGRDVEIDVDVILEDGVTFGDGVKVGPFCRLRNVNLAAGTEVLAHCDLEGVTTYGACKIGPFARLRPGTELAAGVHVGNFVETKKAKLGEGSKANHLTYLGDARVGAGVNIGAGTITCNYDGVNKHLTEIGDGAFIGSNTALVAPVRVGDHATIGAGSTITADAPADKLTLARGR
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain
Protein sequence:
MIVSDDVVFEAKQISKLFPGVKALDGVDLTLRAGRLTTLLGENGAGKSTLMKILAGVQPPDEGELLVQGEPVHFTSPRDAQDHGIAMIHQELSLVPDLTVAENIFLGREPLRFETLIDYTELNRQANEWLKRLELDVSPTTPVRRLRVGQQQLVEIARALAGNVRILIMDEPTSAITERETEVLFRCIADLKKQGVAIVYITHRLEELEQIADDIVVMRDGCLIGTAEFGELSHDAMVRMMVGRDVKILSKQSSSNNQPVLRAEGISLSHPTRPGDYLVHEVDMHVCKGEVLGIFGLMGAGRTELLECLFGLHPTASTGQVSMHDRSVRLRNPADAISHGLALVPEDRKQDGLVLSMSVGENASLASLKHAERFGFIDRGREREHTRRFVERFRVKTPSLREKIINLSGGNQQKVILAKWLATGPAVLMLDEPTRGIDIHAKNEIYSLINELTADGLAVIMVSSELPEVMAVSDRILVMCEGRATQSFDRSEATEENILQAALPRRNSIPC

Annotated regions:
phrase: LSGGNQQKVILAKW
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: LRAEGISLSHPTRPGDYLVHEVDMHVCKGEVLGIFGLMGAGRTELLECLFGLHPTASTGQVSMHDRSVRLRNPADAISHGLALVPEDRKQDGLVLSMSVGENASLASLKHAERFGFIDRGREREHTRRFVERFRVKTPSLREKIINLSGGNQQKVILAKWLATGPAVLMLDEPTRGIDIHAKNEIYSLINELTADGLAVIMVSSELPEVMAVSDRILVMCEGRATQSFDRSEATEENILQAALPR
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: HEVDMHVCKGEVLGIFGLMGAGRTELLECLFGLHPTASTGQVSMHDRSVRLRNPADAISHGLALVPEDRKQDGLVLSMSVGENASLASLKHAERFGFIDRGREREHTRRFVERFRVKTPSLREKIINLSGGNQQKVILAKWLATGPAVLMLDEP
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: LDGVDLTLRAGRLTTLLGENGAGKSTLMKILAGVQPPDEGELLVQGEPVHFTSPRDAQDHGIAMIHQELSLVPDLTVAENIFLGREPLRFETLIDYTELNRQANEWLKRLELDVSPTTPVRRLRVGQQQLVEIARALAGNVRILIMDEPT
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: KGEVLGIFGLMGAGRTELLECLFGLHPTASTGQVSMHDRSVRLRNPADAISHGLALVPEDRKQDGLVLSMSVGENASLASLKHAERFGFIDRGREREHTRRFVERFRVKTPSLREKIINLSGGNQQKVILAKWLATGPAVLMLDEPTRGIDIHAKNEIYSLINELTADGLAVIMVSSELPEVMAVSDRILVMCEG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: AGRLTTLLGENGAGKSTLMKILAGVQPPDEGELLVQGEPVHFTSPRDAQDHGIAMIHQELSLVPDLTVAENIFLGREPLRFETLIDYTELNRQANEWLKRLELDVSPTTPVRRLRVGQQQLVEIARALAGNVRILIMDEPTSAITERETEVLFRCIADLKKQGVAIVYITHRLEELEQIADDIVVMRDG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: FEAKQISKLFPGVKALDGVDLTLRAGRLTTLLGENGAGKSTLMKILAGVQPPDEGELLVQGEPVHFTSPRDAQDHGIAMIHQELSLVPDLTVAENIFLGREPLRFETLIDYTELNRQANEWLKRLELDVSPTTPVRRLRVGQQQLVEIARALAGNVRILIMDEPTSAITERETEVLFRCIADLKKQGVAIVYITHRLEELEQIADDIVVMRDGCLIGTAEFGELSHDAMVRMMVGR
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain
Protein sequence:
MKKIGILTGGGDCPGLNAVIRAVVKKSAKNNWEVIGILDGWKGLIEGNIMPLTDVNISGILPRGGTILGTSRTNPFKEKGNVDAVIKNMKKFKLDALIVIGGEDTLGVALKLHKMGVPVIGVPKTIDNDISGTDYTFGFDTAVSIVTEAIDRLHTTAESHHRIMVLEVMGRHAGWIATISGIAGGADEILIPERSFSIDAVCKNLKARHKKGKKFSIVVVSEGARPKDANQFVIQSQEKDEFGHVRLGGIGQRLAKEIQNRLGIETRFVVLGHVQRGGSPTAYDRVLATRYGIAAVEMVKDKHFGKMVALRGYKIVPVDLNESVTKLKTVDMNIYNVATTFFAKPHNE

Annotated regions:
phrase: KIGILTGGGDCPGLNAVIRAVVKKSAKNNWEVIGILDGWKGLIEGNIMPLTDVNISGILPRGGTILGTSRTNPFKEKGNVDAVIKNMKKFKLDALIVIGGEDTLGVALKLHKMGVPVIGVPKTIDNDISGTDYTFGFDTAVSIVTEAIDRLHTTAESHHRIMVLEVMGRHAGWIATISGIAGGADEILIPERSFSIDAVCKNLKARHKKGKKFSIVVVSEGARPKDANQFVIQSQEKDEFGHVRLGGIGQRLAKEIQNRLGIETRFVVLGHVQRGGSPTAYDRVLATRYGIAAVEM
type: DOMAIN
name: Phosphofructokinase_dom
description: Phosphofructokinase domain

phrase: RFVVLGHVQRGGSPTAYD
type: CONSERVED_SITE
name: Phosphofructokinase_CS
description: Phosphofructokinase, conserved site
Protein sequence:
MFKILLVCALAALVAANENAEVKELVNEVNPDGFKTVVSLSDGSASQASGDVHGNIDGVFEWVSPEGVHVRVAYKADENGYQPSSDLLPVAPPIPEAILKSLAWIEAHPSKE

Annotated regions:
phrase: GVFEWVSPEGVHVRVAYKADENGYQ
type: CONSERVED_SITE
name: CHIT_BIND_RR_consensus
description: Chitin-binding type R&R consensus
Protein sequence:
MLEGGDTPSSANRPLSTIVLAAGEGKRMRSATPKVLHRVGGRTLVQHALVAAAGTRPDHLVAVVGHGREAVTEHVTSLTEQLGKVTVAVQDAQNGTGHAVGCGLAELPGDLGGTVLVTYGDVPLLDTATLTALLDEHARAGNAVTVLTAVVADPTGYGRIVRENGAVRAIVEHKDATDDQRAITEINSGVYAFDAAVLSDGLSRLSTDNRQGEQYLTDVLGIAVADGRPVGALTSTDPWLVEGVNDRVQLAAIGAELNQRLLEAHMRAGVTVVDPASTWIDADVTLGVDVHIEPGVQLHGATAIGDGANIGPDTTLANVTVGAGAKVVRTHGSDSEIGDGASVGPFAYLRPGVHLGRSGKIGTFVEVKNSEIGEGSKVPHLSYVGDATIGERSNIGAASVFVNYDGVNKHRTVVGSHVRMGTDNSYVAPVTVGDGAYSGAGTVIRRDVPPGALAVSGGPQRNLEGWVLSRRPGTPAADAAQRALDEAARTQDENGTDAEGSRA

Annotated regions:
phrase: IVLAAGEGKRMRSATPKVLHRVGGRTLVQHALVAAAGTRPDHLVAVVGHGREAVTEHVTSLTEQLGKVTVAVQDAQNGTGHAVGCGLAELPGDLGGTVLVTYGDVPLLDTATLTALLDEHARAGNAVTVLT
type: DOMAIN
name: MobA-like_NTP_Trfase
description: MobA-like NTP transferase

phrase: GVTVVDPASTWIDADVTLGVDVHIEPGVQLHGATAIGDGANIGPDTTLANVTVGAGAKVVRTHGSDSEIGDGASVGPFAYLRPGVHLGRSGKIGTFVEVKNSEIGEGSKVPHLSYVGDATIGERSNIGAASVFVNYDGVNKHRTVVGSHVRMGTDNSYVAPVTVGDGAYSGAGTVIRRDVPPGALAVSGGP
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain
Protein sequence:
MTQYSHVKYTQSPTPSVVSGYSSASRLHSPLPPPANHRRDCLSATTKSYKYLRRLLKFNQMDFEFALWQMLYLFVAPQKVYRNFNYRKQTKSQFARDDPAFLVLLVVCLCVTSLGFAYVLGLSFWQSISFIFYVVFVDCIFVGIIIASFFWAVTNRYLRTNSLEPDIEWGYAFDVHLNAFFPPLMLLHFIQLFFYNWLISQTWFISRFLGNTFWLMGMGYYVYITFLGYNCIPHLKNTRIILIALPIIFLLFLVVTIIGWNATISFVNFYKYRVY

Annotated regions:
Protein sequence:
MVACVIKDWQGSEVGETALELRVAKAENAAHIVHRALRRQMANARQGTASTKTRAEVRGGGRKPWRQKGTGRARAGSNRSPLWRGGGVIFGPKPRDYSIKMNYKERRLALRTALISRSDSLIVVEDFSDKLPRPKTKELAAAIARWGVQPNDKVLLIVADKQDTIYLSARNIATVKLIQATSLNVFDLLNADWIVATVEALGKIQEVYGG

Annotated regions:
Protein sequence:
MGGKWSKSSIVGWPEIRERIRRTRPTRPADPAAEGVGAASRDLDRHGALTSSNTAQNNADCAWLEAQEEEGDVGFPVRPQVPLRPMTYKGAFDLSFFLKEKGGLDGLIYSKKRQEILDLWVYHTQGFFPDWQNYTPGPGVRHPLTFGWCFKLVPVDPREVEANEGENTCLLHPMSLHGMEDEEREVLKWQFDSSLARRHLAREKHPEWYKDC

Annotated regions:
Protein sequence:
MTKSNADLSAHTPMMQQYWKLKREHPDQLMFYRMGDFYELFYDDAKKAAALLDITLTARGQSAGTAIPMAGIPFHSAEGYLARLVKLGESVVICEQIGDPATSKGPVERQVVRIITPGTVSDEALLDERRDNLLAAVVGDEKLFGLSVLDIASGRFSVQELKGWETLLAELERLSPAELLIPDDWPQGLPLEKRRGVRRRAPWDFDRDSAFKSLCQQFSTQDLKGFGCENLTLAIGAAGCLLAYAKETQRTALPHLRSLRHERLDDTVILDGASRRNLELDVNLAGGRENTLQSVMDRCQTAMGSRLLTRWLNRPLRNREILEARQDSITCLLEHYRFEQLQPQLKDIGDLERILARIGLRNARPRDLARLRDALAALPQLQAGMQDLVAPHLLGLAKSIGTYPELADLLARAIIDNPPAVIRDGGVLKTGYDAELDELQSLSENAGQYLMDLETREKARTGLANLKVGYNRVHGYFIELPSKQAESAPADYIRRQTLKGAERFITPELKEFEDKALSAKSRALAREKLLYDELLEMLIGHLAPLQESAAALAELDVLSNLAERALNLDLNRPRFVEQPCLRIEQGRHPVVEQVLETPFVANDLALDDATRMLVITGPNMGGKSTYMRQTALIVLLAQIGSFVPAAACELSLVDRIFTRIGSSDDLAGGRSTFMVEMSETANILHNASDRSLVLMDEVGRGTSTFDGLSLAWAAAEQLARLRAFTLFATHYFELTVLPESEPVVANVHLSATEHNERIVFLHHVLPGP

Annotated regions:
phrase: LVITGPNMGGKSTYMRQTALIVLLAQIGSFVPAAACELSLVDRIFTRIGSSDDLAGGRSTFMVEMSETANILHNASDRSLVLMDEVGRGTSTFDGLSLAWAAAEQLARLRAFTLFATHYFELTVLPESEPVVANVHLSATEHNERIVFLHHVLP
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: TPMMQQYWKLKREHPDQLMFYRMGDFYELFYDDAKKAAALLDITLTARGQSAGTAIPMAGIPFHSAEGYLARLVKLGESVVICEQIGDPATSKGPVERQVVRIITPGTVSD
type: DOMAIN
name: DNA_mismatch_repair_MutS-lik_N
description: DNA mismatch repair protein MutS-like, N-terminal

phrase: SLVLMDEVGRGTSTFD
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: GYDAELDELQSLSENAGQYLMDLETREKARTGLANLKVGYNRVHGYFIELPSKQAESAPADYIRRQTLKGAERFITPELKEFEDKALSAK
type: DOMAIN
name: DNA_mismatch_repair_MutS_clamp
description: DNA mismatch repair protein MutS, clamp

phrase: GRENTLQSVMDRCQTAMGSRLLTRWLNRPLRNREILEARQDSITCLLEHYRFEQLQPQLKDIGDLERILARIGLRNARPRDLARLRDALAALPQLQAGMQDLVAPHLLGLAKSIGTYPELADLLARAIIDNPPAVIRDGGVLKTGYDAELDELQSLSENAGQYLMDLETREKARTGLANLKVGYNRVHGYFIELPSKQAESAPADYIRRQTLKGAERFITPELKEFEDKALSAKSRALAREKLLYDELLEMLIGHLAPLQESAAALAELDVLSNLAERALNLDLNRPRFVEQPCLRIEQGRHPVVEQ
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: NLLAAVVGDEKLFGLSVLDIASGRFSVQELKGWETLLAELERLSPAELLIPDDWPQGLPLEKRRGVRRRAPWDFDRDSAFKSLCQQFSTQDLKGFGCENLTLAIGAAGCLLAYAKETQRTALPHL
type: DOMAIN
name: DNA_mmatch_repair_MutS_con_dom
description: DNA mismatch repair protein MutS, connector domain

phrase: TRMLVITGPNMGGKSTYMRQTALIVLLAQIGSFVPAAACELSLVDRIFTRIGSSDDLAGGRSTFMVEMSETANILHNASDRSLVLMDEVGRGTSTFDGLSLAWAAAEQLARLRAFTLFATHYFELTVLPESEPVVANVHLSATEHNERIVFLHHVLPG
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: ASRRNLELDVNLAGGRENTLQSVMDRCQTAMGSRLLTRWLNRPLRNREILEARQDSITCLLEHYRFEQLQPQLKDIGDLERILARIGLRNARPRDLARLRDALAALPQLQAGMQDLVAPHLLGLAKSIGTYPELADLLARAIIDNPPAVIRDGGVLKTGYDAELDELQSLSENAGQYLMDLETREKARTGLANLKVGYNRVHGYFIELPSKQAESAPADYIRRQTLKGAERFITPELKEFEDKALSAKSRALAREKLLYDELLEMLIGHLAPLQESAAALAELDVLSNL
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core
Protein sequence:
MDPKDRKKIQFSVPAPPSQLDPRQVEMIRRRRPTPALLFRVSEHSSPEEESSPHQRTSGEGHHPKSKRPNPCAYTPPSLKAVQRIAESHLQTISNLSENQASEEEDELGELRELGYPQEDDEEDEDEDEEEDEEEDSQAEVLKGSRGTAGQKLTSGQGLEGPWERPPPLDEPQRDGNSEDQGEGRATQSEPGEEPRHPTPPESGT

Annotated regions:
Protein sequence:
MQRRVSGFILLTKIRPKSARNCIWNSESVRRRKPLHLSDLIPVAVDAHADKATISTLEITGISSDSRKAAAGHLFVAINGNSSDGRAYAATAVEAGAVAILTDARELDDSLTALATSGVPVLRSDDPRRDLAHAAARFWRRQPGMVAAVTGTNGKTSTAEFLRQIWSRVTWDAVSIGTLGLQGADPRAMQGSIMGLPALTTPDAVSLHSALAPLTTAGVTHLALEASSHGLAQRRLDGLNIHIAAFTNLTRDHLDHHPDMESYFAAKARLFTELLMPGGTAVINIDDPYGARLAEMIRGDGPRQHVLLTIGTDPAADFHITAITPMEFGLEVGVEHAGTSHRIPMALAGTFQAINAITAAVMAHASGLPIHDSLFALPYVTGADGRMQLVTGHPSGARVIVDYAHTPDALRAALSALRPEAKGRLAVLFGAGGDRDPGKRSMMGKVAQNGADLVYVTDDNPRSEDPGDIRKAILDGCPDAVEIADRGAAITAALGELSAEDVLLIAGKGHENFQLVGDETLPFSDSSVARNAIKRLTSEGGAG

Annotated regions:
phrase: EITGISSDSRKAAAGHLFVAINGNSSDGRAYAATAVEAGAVAILTDARELDDSLTALATSGVPVLRSDDPRRDLAHAAAR
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: GRMQLVTGHPSGARVIVDYAHTPDALRAALSALRPEAKGRLAVLFGAGGDRDPGKRSMMGKVAQNGADLVYVTDDNPRSEDPGDIRKAILDGCPDAVEIADRGAAITAALGELSAEDVLLIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: VTGTNGKTSTAEFLRQIWSRVTWDAVSIGTLGLQGADPRAMQGSIMGLPALTTPDAVSLHSALAPLTTAGVTHLALEASSHGLAQRRLDGLNIHIAAFTNLTRDHLDHHPDMESYFAAKARLFTELLMPGGTAVINIDDPYGARLAEMIRGDGPRQHVLLTIGTDPAADFHITAITPMEFGLEVGVEHAGTSHRIPMALAGTFQAINAITAAV
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central
Protein sequence:
MDYFPIFMKLQDQACLLVGGGEVALRKARLLRSAGARLRIIAPELTPELAAWVAAGEVEHIAAAFRPEMLGHPQLVIAATNAREVNQQVTDAAKAAGIPVNVVDDPELSSFITPAIIDRSPMVIAVSTGGKVPVLARLMRARLESLIPAGYGALARFAGDWRERVKARFSQVDERRAFWEAVLQGPLAEAVMAGSDGGDVEMDALLASNARWHAGCVYLVGAGPGNPDLLTFRALRLMQQADVVLYDKLVAPELLELVRRDAERIYVGKARADHTLPQDDINSLMVSLAKAGRRVLRLKGGDPFTFGRGGEEIDTLAAEGIPFEVVPGITSASGAAAYAGIPLTHRDYAQSVVFVTGHMKDGSFNLDWPALTRPQQTVVVYMGLSHIQGLCDGFILHGKAADTPAAIVEQATTVRQRTLTGTLADLPALAQAHGIASPALIIVGEVVRLSDRLAWYRRKPAGG

Annotated regions:
phrase: GCVYLVGAGPGNPDLLTFRALRLMQQADVVLYDKLVAPELLELVRRDAERIYVGKARADHTLPQDDINSLMVSLAKAGRRVLRLKGGDPFTFGRGGEEIDTLAAEGIPFEVVPGITSASGAAAYAGIPLTHRDYAQSVVFVTGHMKDGSFNLDWPALTRPQQTVVVYMGLSHIQGLCDGFILHGKAADTPAAIVEQATTVRQRTLTGTLADLPALAQAHGIASPALIIVGEVVRL
type: DOMAIN
name: CobA/CysG_C
description: Uroporphyrin-III C-methyltransferase

phrase: VYLVGAGPGNPDLLTFRALRLMQQADVVLYDKLVAPELLELVRRDAERIYVGKARADHTLPQDDINSLMVSLAKAGRRVLRLKGGDPFTFGRGGEEIDTLAAEGIPFEVVPGITSASGAAAYAGIPLTHRDYAQSVVFVTGHMKDGSFNLDWPALTRPQQTVVVYMGLSHIQGLCDGFILHGKAADTPAAIVEQATTVRQRTLTGTLAD
type: DOMAIN
name: 4pyrrol_Mease
description: Tetrapyrrole methylase

phrase: VLRLKGGDPFTFGRGGEEIDTLAAEGIPFEVVP
type: CONSERVED_SITE
name: Uropor_MeTrfase_CS
description: Uroporphiryn-III C-methyltransferase, conserved site

phrase: GYGALARFAGDWRERVKARFSQVDERRAFWEAVLQGPLAEAVMAG
type: DOMAIN
name: Sirohaem_synthase_dimer_dom
description: Sirohaem synthase, dimerisation domain

phrase: FPIFMKLQDQACLLVGGGEVALRKARLLRSAGARLRIIAPELTPELAAWVAAGEVEHIAAAFRPEMLGHPQLVIAATNAREVNQQVTDAAKAAGIPVNVVDDPELSSFITPAIIDRSPMVIAVSTGGKVPVLARLMRARLESLIPAGYGALARFAGDWRERVKARFSQVDERRAFWEAVLQGPLAEAVMAG
type: DOMAIN
name: Sirohaem_synthase_N
description: Sirohaem synthase, N-terminal

phrase: VGAGPGNPDLLTFRALRLMQQADVVLYDKLVAPELLELVRRDAERIYVGKARADHTLPQDDINSLMVSLAKAGRRVLRLKGGDPFTFGRGGEEIDTLAAEGIPFEVVPGITSASGAAAYAGIPLTHRDYAQSVVFVTGHMKDGSFNLDWPALTRPQQTVVVYMGLSHIQGLCDGFILHGKAADTPAAIVEQATTVRQRTLTGTLADLPALAQAHGIASPALIIVGEV
type: DOMAIN
name: CobA/CysG_C
description: Uroporphyrin-III C-methyltransferase

phrase: PMVIAVSTGGKVPVLARLMRARLE
type: DOMAIN
name: Sirohaem_synthase_central
description: Siroheme synthase, central domain
Protein sequence:
MQRFIRTKGIILAAGRGLRMKSKTAKPFHHLGGEYLVSHVINSMQKSGIEEIIVIISPDIQKNKELLKFTSGFSSEIKFVVQKTPRGTGDALLQGVGLVSDCDLIVVAACDVPLVTSNAINSMIHDMNSGNSCGQVLVARVPDPTGYGRVKVDGKNSNVKCIIEEDDLNHNDKDINLINTSWYCFDTGWVRGRLKEIQQSKSGEIQLTDIVKFSNTSNIVSHSLLDDHLEAIGINSKIDLSKAEKVLKDRIGKKWMLAGVTIIDPDTTYIDSSVIIQPDSTLYPGTHLKGSTLISAGAMIGPNTIIENSKVGAKSKIISSHVSDSVIGPDVVIGSNARIRNGTRVGHQCVLGNGVEVKNSTIGEETKISHFSYIGDAKIGKHVNIGAGTVTCNYDGQFKHETFIDDDVFIGSGTMLIAPVKIFSKAKTGAGSVVTKNIKSGIAVKGVPARPYDREITINQKDEND

Annotated regions:
phrase: IDDDVFIGSGTMLIAPVKIFSKAKTGAGSVVT
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: GVTIIDPDTTYIDSSVIIQPDSTLYPGTHLKGSTLISAGAMIGPNTIIENSKVGAKSKIISSHVSDSVIGPDVVIGSNARIRNGTRVGHQCVLGNGVEVKNSTIGEETKISHFSYIGDAKIGKHVNIGAGTVTCNYDGQFKHETFIDDDVFIGSGTMLIAPVKIFSKAKTGAGSVVTKNIKS
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain

phrase: KGIILAAGRGLRMKSKTAKPFHHLGGEYLVSHVINSMQKSGIEEIIVIISPDIQKNKELLKFTSGFSSEIKFVVQKTPRGTGDALLQGVGLVSDCDLIVVAACDVPLVTSNAINSMIHDMNSGNSCGQVLVARVPDPTGYGRVKVDGKNSNVKCIIEEDDLNHNDKDINLINTSWYCFDTGWVRGRLKEIQQSKSGEIQLTDIV
type: DOMAIN
name: NTP_transferase_dom
description: Nucleotidyl transferase domain

phrase: DSVIGPDVVIGSNARIRNGTRVGHQCVLGNGVEVK
type: REPEAT
name: Hexapep
description: Hexapeptide repeat
Protein sequence:
MSKFQQNNYNNFNMNNNNNNGNRNNNNNNNNNKKNNKNNGIFVMTLIFIALIALFAVSLFSKNFSQMSSKETSYDQFLTYLKKGEIKEVKVGSYEIDYKLIKKKGEKYEITYYTGRISDLKLVDRLKDARTKNNKPVKFNAVIPDNTSTVILNVLSLIMPIALLVLLFLMFARHMDGGSMGVGKNKAKVYVEKSTGVTFKDVAGQDEAKESLQEVVDFLHNPAKYREIGAKLPKGALLVGPPGTGKTLLAKAVAGEANVPFFSIAGSDFVEMFVGVGASRVRELFKEAQRLAPCIVFIDEIDAIGKSRDSRYGGGNDEREQTLNQLLAEMDGFDQSKGVLILAATNRPEVLDKALLRPGRFDRRIIVDHPDLKGRLETLKVHSKNVNMDETVDLDALALATAGLVGSELANLINEAAINAVKNGRKAVNQEDLFEAFEIVAVGGKEKKDRAMSDKERKTVAYHEVGHALVTALTKNSEPVQKITIVPRTMGALGYTLQTPEEEKFLRTKDELLAKITTYMGGRAAEMLKFNVATSGASNDIEEASKIARAMVTMYGMSDRFGMMCLATIENQYLSNSAGLICGEDTAGLVDKEVYSIINNAYEEAYKMLKENEEILDAISEYLYEKETITGKEFMQMYRKMKGLPEPEEESKVHKLQSGNTIDLSKKDEAESKKDDTREVESFKEVESTENVDEVQQQNVEKSINPYEREFGFARNSVPQKDDLIQNLLKEDAEESKKYVIDLQQESNSDKASNDNVNNTNDVNNTND

Annotated regions:
phrase: VLILAATNRPEVLDKALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: LPKGALLVGPPGTGKTLLAKAVAGEANVPFFSIAGSDFVEMFVGVGASRVRELFKEAQRLAPCIVFIDEIDAIGKSRDSRYGGGNDEREQTLNQLLAEMDGFDQSKGVLILAATNRPEVLDKALLRPGRFDRRIIVDHP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: AMSDKERKTVAYHEVGHALVTALTKNSEPVQKITIVPRTMGALGYTLQTPEEEKFLRTKDELLAKITTYMGGRAAEMLKFNVATSGASNDIEEASKIARAMVTMYGMSDRFGMMCLATIENQYLSNSAGLICGEDTAGLVDKEVYSIINNAYEEAYKMLKENEEILDAISEYLYEKETITGKEFM
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: VDLDALALATAGLVGSELANLINEAAINAVKNGRKAVNQED
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: LLVGPPGTGKTLLAKAVAGEANVPFFSIAGSDFVEMFVGVGASRVRELFKEAQRLAPCIVFIDEIDAIGKSRDSRYGGGNDEREQTLNQLLAEMDGFDQSKGVLILAATNRPEVLDKALLRPGRFDRRII
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: LIFIALIALFAVSLFSKNFSQMSSKETSYDQFLTYLKKGEIKEVKVGSYEIDYKLIKKKGEKYEITYYTGRISDLKLVDRLKDARTKNNKP
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular
Protein sequence:
MQVSDFHFELPDELIARYPKAERTASRLLQLDGNSGQLVDGTFKDVLELVEPGDLLVFNNTRVIPARMFGRKASGGKLEVLVERMLDEHTILAHVRSSKPPKPGTELYLGENDEFHAVMQARHDALFEIRFTAETVVLDILNQIGHMPLPPYIDRPDEEADKERYQTVYNQKPGAVAAPTAGLHFDQALLEQIQAKGVELAYVTLHVGAGTFQPVRVENIHDHHMHAEYVEVPQEVVDAITATKARGGRVVAVGTTSVRSLESAAQDALQKGTELKPFFGDTEIFIFPGYQYQLVDCLITNFHLPESTLIMLVSAFAGYEHTMAAYEHAVKEQYRFFSYGDAMFIRKQMTKA

Annotated regions:
Protein sequence:
MSPIFTPVTSVAPNITKVILAITGGIAAYKSAILARLLIKSGFEVRVIMTAGAQQFITPLTLQALTGNEVHTELLDTKAEAGMGHIELAKWADLIVIAPASANTLARLAMGMADDLLTTVCLATAAPVMVAPAMNQQMWAHPAVQLNVQTLSDMGYEIIEPDSGVQACGDVGSGRLPEPDILLRQVINFKARLTVAQCLTGKKVTITAGPTVEAIDPVRFLSNHSTGKMGFALARACRDAGAEVTLIAGGKVSLMTPLKVKRIDVLSANDMLQAATRSVEAGCDIFIATAAVADYRTRDAAPQKIKKTQDEMTLDLVKNPDILATISHSYPDMFVVGFAAETQDVEKYARGKLESKNLDMIACNDVSRKDIGFASDENAMLVFFANQYQKPPVELEKMSKANIAEHLVNLIGSVLN

Annotated regions:
phrase: LTGKKVTITAGPTVEAIDPVRFLSNHSTGKMGFALARACRDAGAEVTLIAGGKVSLMTPLKVKRIDVLSANDMLQAATRSVEAGCDIFIATAAVADYRTRDAAPQKIKKTQDEMTLDLVKNPDILATISHSYPDMFVVGFAAETQDVEKYARGKLESKNLDMIACNDVSRKDIGFASDENAML
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal

phrase: KVILAITGGIAAYKSAILARLLIKSGFEVRVIMTAGAQQFITPLTLQALTGNEVHTELLDTKAEAGMGHIELAKWADLIVIAPASANTLARLAMGMADDLLTTVCLATAAPVMVAPAMNQQMWAHPAVQLNVQTLSDMGYEIIEPDSGVQACGDVGS
type: DOMAIN
name: Flavoprotein
description: Flavoprotein
Protein sequence:
MTVSIYLAKGRDKALRRRHPWIFSRGIDRIDGKAELGETVEIYANNGEWLARGAFSPQSQIRARVWTFDKNEAIDKDFFVRKLNQAQALRNVLAERDGLTGYRLIAAESDGLPGITIDRYQDYFVCQLLSAGAEATKELLVEALVECYPDCNIYERSDVSVRKKEGLKQRTGVLHGEEPPESVVIEENGVKISVDIVNGHKTGFYLDQRDSRERACKYVKNKSVLNCFSYTGGFGLYALKGGAKHVINADVSQLALDTAKYNAEINKFDLSKAEFLNADVFKLLREYRDNGTKFDVVIMDPPKFAESKNQLTGACRGYKDINMLAMQILNPGGTLLTYSCSGLMDAGLFQKIVADAALDAHRTVQFIERFEQAADHPLDSAYPEGFYLKGFACRVV

Annotated regions:
phrase: IYLAKGRDKALRRRHPWIFSRGIDRIDGKAELGETVEIYANNGEWLARGAFSPQSQIRARVWT
type: DOMAIN
name: RlmI-like_PUA
description: RlmI-like, PUA domain

phrase: VSIYLAKGRDKALRRRHPWIFSRGIDRIDGKAELGETVEIYANNGEWLARGAFSPQSQIRARVWTFDKN
type: DOMAIN
name: RlmI-like_PUA
description: RlmI-like, PUA domain

phrase: VSIYLAKGRDKALRRRHPWIFSRGIDRIDGKAELGETVEIYANNGEWLARGAFSPQSQIRARVWTFDKNEAIDKDFFVRKLNQAQ
type: DOMAIN
name: PUA
description: PUA domain

phrase: RTGVLHGEEPPESVVIEENGVKISVDIVNGHKTGFYLDQRDSRERACKYVKNKSVLNCFSYTGGFGLYALKGGAKHVINADVSQLALDTAKYNAEINKFDLSKAEFLNADVFKLLREYRDNGTKFDVVIMDPPKFAESKNQLTGACRGYKDINMLAMQILNPGGTLLTYSCSGLMDAGLFQKIVADAALDAHRTVQFIERFEQA
type: DOMAIN
name: SAM-dep_methyl-trfase
description: S-adenosylmethionine-dependent methyltransferase
Protein sequence:
MGNARNIAFWVVLFLLILALFNLISGGQTTMSSQTVSYSEFVQSVEAGEVSSVTLDGERALIRRNDGTNVSTIIPDGTDVTERLLDNGVNVTGEPQEQNGLLSYVGTLLPFLILIGIWIFLMNRMQGGGRGGAMGFGKSRAKLLTEKQGRVTFDDVAGIDEAKDELEEIVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRSRGVGYGGGNDEREQTLNQLLVEMDGFEANEGIIIVAATNRPDVLDPALLRPGRFDRQVQVPNPDIKGREKILGVHARKVPLGPNVDLRIIARGTPGFSGADLANLVNEAALMAARVGRRFVTMEDFENAKDKVMMGSERRSMVMTEDEKKLTAYHEAGHAIVGLNVPQHDPIHKATIIPRGRALGLVLSLPERDQLSVSYTKYTSKIAMAMGGRVAEELIFGPENVTSGASSDIQQVTRIARAMVTQFGFDPELGYVDYANEQDSYLGNYGGGTNHSGITQKTIDDKIKALVDEGYETAKRILTEKSEDLERLAQGLLEYETLTGDEITKVIAGEPLKRGDDEDNSSDSGSAPSLTAVPKTTKPKSDDGSGMEPEPTA

Annotated regions:
phrase: MVMTEDEKKLTAYHEAGHAIVGLNVPQHDPIHKATIIPRGRALGLVLSLPERDQLSVSYTKYTSKIAMAMGGRVAEELIFGPENVTSGASSDIQQVTRIARAMVTQFGFDPELGYVDYANEQDSYLGNYGGGTNHSGITQKTIDDKIKALVDEGYETAKRILTEKSEDLERLAQGLLEYETLTGDEITK
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: NVDLRIIARGTPGFSGADLANLVNEAALMAARVGRRFVTMEDF
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: IIIVAATNRPDVLDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: LLVGPPGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRSRGVGYGGGNDEREQTLNQLLVEMDGFEANEGIIIVAATNRPDVLDPALLRPGRFDRQVQV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: IPKGALLVGPPGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRSRGVGYGGGNDEREQTLNQLLVEMDGFEANEGIIIVAATNRPDVLDPALLRPGRFDRQVQVPNP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: AFWVVLFLLILALFNLISGGQTTMSSQTVSYSEFVQSVEAGEVSSVTLDGERALIRRNDGTNVSTIIPDGTDVTERLLDNGVNVTGEP
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular