nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MENRWQVLIVWQIDRMKIKTWHSLVKHHIYISKRANRWHYRHHYESRNPKVSSEVHIPLEEAKLIVKTYWGLQTGERDWHLGHGCSIEWRLREYSTQVDPGLADQLIHMHYFDCFAESAIRKAILGHIVIPRCDYPTGHNQVGSLQYLALTALIKPKRRKPPLPSVRKLAEDRWNNPQKTKGHRESHTMNGH

Annotated regions:
Protein sequence:
MEHIYQYTWIIPFIPLTVPLLIGAGLIIFPTTTKNLRRMWAFPSILLLSLVMLFSTKLSIQQINSHYIYQSVWSWTINNDFSLEFGYLVDPLTSIMSMLITTVGILVLIYSDNYMVHDQGYLRFFAYLSFFNTSMLGLVTSSNFIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWLTGSFEFRDLFEIFNTLIYNNEVHFLVGTVCTFLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLFPLLIVTPFILNLIALVGIITLFLGATLASCSKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGCVIHSMEAIVGYSPDKSQNMVFMGGLKKHVPITKTAFLLGTLSLSGIPPLACFWSKDEIINDTWLYSPIFAIISWATVGFTAFYMFRIYLLTFEGHLNVHFQNYNGKKSSSVYSISLWGHEGLKPINKNLSLFTLLPIKNNESFYKNPHGDIKKTIQSFLITNNCDNKKIVPYPHESGNTMLFPLLVLIIFTGVIGFIGIPFDQENMDFDILSSWLTPSVNLLHLKLNNKNSFDWSEFLTNATLSVSIAYSGIVLASFLYKPIYSYSSLQNFALINLFAKRHPKRFFSDKIKNVIYDWAHHRGYIDAFYTRYIIRSVRGLSQFINFFDRRVIDGIPNGLGVTSFFVGEGLKYVGGGRISSYLFLYLLYASIFLLIYYFDFTNININFTDQ

Annotated regions:
phrase: RIYLLTFEGHLNVHFQNYNGKKSSSVYSISLWGHEGLKPINKNLSLFTLLPIKNNESFYKNPHGDIKKTIQSFLITNNCDNKKIVPYPHESGNTMLFPLLVLIIFTGVIGFIGIPFDQENMDFDILSSWLTPSVNLLHLKLNNKNSFDWSEFLTNATLSVSIAYSGIVLASFLYKPIYSYSSLQNFALINLFAKRHPKRFFSDKIKNVIYDWAHHRGYIDAFYTRYIIRSVRGLSQFINFF
type: DOMAIN
name: NADH_UbQ_OxRdtase_chlpt_su5_C
description: NADH:ubiquinone/plastoquinone oxidoreductase, chloroplast chain 5, C-terminal

phrase: SSNFIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLLLGILGLYWLTGSFEFRDLFEIFNTLIYNNEVHFLVGTVCTFLLFAGAVAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLFPLLIVTPFILNLIALVGIITLFLGATLASCSKDIKRGLAYSTMSQLGYMMLALGMGSYRAALFHLITHAYSKALLFLGSGCVIHSMEAIVGYSPDKSQNMVFMGGLKKHVPITKTAFLLGTLSLSGIPPLACFWSKDEIINDTWLYSPIFAIIS
type: DOMAIN
name: ND/Mrp_TM
description: NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domain

phrase: WTINNDFSLEFGYLVDPLTSIMSMLITTVGILVLIYSDNYMVHDQGYLRF
type: DOMAIN
name: Proton_antipo_N
description: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal
Protein sequence:
MTGTPKIAALIVAAGQGARSGEGVPKQYRPVGGKAVIAHTVDALAAFPAIDVVQVVIGEGQDALYAKAIDGRALPPPVRGGATRRDSVIAGLEAIEADIVLIHDAARPFLSAAVIGRLLAALDGSDGAVPALAVADTLARGDGLLGDTVSRDGLHRIQTPQVFRRDAILGAHRIWNEGREATDDAQVARAAGLSVAIVEGDSALDKLTFPVDFEAAEDRMLISRTAQGFDVHGFTSGDAVQLGGVRIAHDRALAGHSDADVALHALTDALLGTIAAGDIGSHFPPSDARWKGADSEIFLAHARDLVRAAGGVIDHVDVTIICEAPKIGPHRDAIRDRIAALLGIRAGQVSVKATTTERLGFTGRREGIAAQAIATVRAPLIQQCRTSA

Annotated regions:
phrase: RTAQGFDVHGFTSGDAVQLGGVRIAHDRALAGHSDADVALHALTDALLGTIAAGDIGSHFPPSDARWKGADSEIFLAHARDLVRAAGGVIDHVDVTIICEAPKIGPHRDAIRDRIAALLGIRAGQVSVKATTTERLGFTGRREGIAAQAIAT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: VDFEAAEDRMLISRTAQGFDVHGFTSGDAVQLGGVRIAHDRALAGHSDADVALHALTDALLGTIAAGDIGSHFPPSDARWKGADSEIFLAHARDLVRAAGGVIDHVDVTIICEAPKIGPHRDAIRDRIAALLGIRAGQVSVKATTTERLGFTGRREGIAAQAIATV
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RTAQGFDVHGFTSGDAVQLGGVRIAHDRALAGHSDADVALHALTDALLGTIAAGDIGSHFPPSDARWKGADSEIFLAHARDLVRAAGGVIDHVDVTIICEAPKIGPHRDAIRDRIAALLGIRAGQVSVKATTTERLGFTGRREGIAAQAIAT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: SRTAQGFDVHGFTSGDAVQLGGVRIAHDRALAGHSDADVALHALTDALLGTIAAGDIGSHFPPSDARWKGADSEIFLAHARDLVRAAGGVIDHVDVTIICEAPKIGPHRDAIRDRIAALLGIRAGQVSVKATTTERLGFTGRREGIAAQAIATVR
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RTAQGFDVHGFTSGDAVQLGGVRIAHDRALAGHSDADVALHALTDALLGTIAAGDIGSHFPPSDARWKGADSEIFLAHARDLVRAAGGVIDHVDVTIICEAPKIGPHRDAIRDRIAALLGIRAGQVSVKATTTERLGFTGRREGIAAQAIAT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: SDADVALHALTDALL
type: CONSERVED_SITE
name: MECDP_synthase_CS
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site

phrase: VLIHDAA
type: CONSERVED_SITE
name: ISPD_synthase_CS
description: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site
Protein sequence:
MEFSKMKILIGTKNNGKIKEIKKILNGIDVTILTPNDLGIKKKPLENGKDFWENSITKARFYHELSSYPTLAEDSGLEVEALNGLPGVHSARFAGDQASDKENWEKLLLLLKDLPEEKRKARFICVVSFIDKNGDIKFFEGKVEGVITKEAIGERGFGYDPIFFVSEKGKTMAQLTEDEKNLISHRGKAWREAKAYLEKIIRSNKNRGVAQPG

Annotated regions:
Protein sequence:
MAANRNLKQVRIENSSPAAPLGMVGGGGGLKGLRGLETENEAAAMALVPGKEGGDEEQEGGFTIDIKSFLKPGEKSYTQRCRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIRLESRTLAEIAKAELDGTILKSRPLRIRFATHGAALTVKNLSPVVSNELLEQAFSQFGPVERAVVVVDDRGRATGKGFVEFAAKPPARKALERCSDGAFLLTTTPRPVVVEPMEQFDDEDGLPEKLMQKTQQYHKEREQPPRFAQPGTFEFEYASRWKALDEMEKQQREQVDRNIREAKEKLEAEMEAARHEHQLMLMRQDLMRRQEELRRLEELRNQELQKRKQIQLRHEEEHRRREEEMLRQREQEELRRQQEGGFKPNFMDNREQEMRMGDMGPRGAINMGDAFSPAPAGNQGPPPMMGMNMNNRGTLPGPAMGPGPSMGPEGAANMGTPMMPDNGTVHNERFPQGGPSQMGSPLVSRTGSETPQPPMSGVGTVSGGPGGFGRGNPGGNFEGPNKRRRY

Annotated regions:
phrase: CRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIRLESRTLAEIAKAELDGTILKSRPLRIRFAT
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: ALTVKNLSPVVSNELLEQAFSQFGPVERAVVVVDDRGRATGKGFVEFAAKPPARKALERCSDGAFLLTTTPRPVVVEPM
type: DOMAIN
name: PSP1_RRM2
description: PSP1, RNA recognition motif 2

phrase: RCRLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIRLESRTLAEIAKAELDGTILKSRPLRIR
type: DOMAIN
name: PSP1_RRM1
description: PSP1, RNA recognition motif 1

phrase: AALTVKNLSPVVSNELLEQAFSQFGPVERAVVVVDDRGRATGKGFVEFAAKPPARKALERCSDGAFLLTTTPRPVVVEPME
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: LTVKNLSPVVSNELLEQAFSQFGPVERAVVVVDDRGRATGKGFVEFAAKPPARKALERC
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: LFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIRLESRTLAEIAKAELDGTILKSRPL
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: ALTVKNLSPVVSNELLEQAFSQFGPVERAVVVVDDRGRATGKGFVEFAAKPPARKALERCSDGAFLLTTTPRPVVV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: RLFVGNLPTDITEEDFKRLFERYGEPSEVFINRDRGFGFIRLESRTLAEIAKAELDGTILKSRPLRI
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: PVVVEPMEQFDDEDGLPEKLMQKTQQYHKEREQPPRFAQPGTFEFEYASRW
type: DOMAIN
name: NOPS
description: NOPS
Protein sequence:
MAEELEKSMHKEESLMEKIADKIHDHDSSSSSDSEHEKPESPSALKAKIYRLFGREKPVHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGLWIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEKVLSKLPVASLKAKLG

Annotated regions:
phrase: ADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGLWIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAE
type: DOMAIN
name: Reticulon
description: Reticulon

phrase: PADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGLWIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEKVLSKLPVASLKAKL
type: DOMAIN
name: Reticulon
description: Reticulon
Protein sequence:
MNATGTPVAPESCQQLAAGGHSRLIVLHYNHSGRLAGRGGPEDGGLGALRGLSVAASCLVVLENLLVLAAITSHMRSRRWVYYCLVNITLSDLLTGAAYLANVLLSGARTFRLAPAQWFLREGLLFTALAASTFSLLFTAGERFATMVRPVAESGATKTSRVYGFIGLCWLLAALLGMLPLLGWNCLCAFDRCSSLLPLYSKRYILFCLVIFAGVLATIMGLYGAIFRLVQASGQKAPRPAARRKARRLLKTVLMILLAFLVCWGPLFGLLLADVFGSNLWAQEYLRGMDWILALAVLNSAVNPIIYSFRSREVCRAVLSFLCCGCLRLGMRGPGDCLARAVEAHSGASTTDSSLRPRDSFRGSRSLSFRMREPLSSISSVRSI

Annotated regions:
phrase: ENLLVLAAITSHMRSRRWVYYCLVNITLSDLLTGAAYLANVLLSGARTFRLAPAQWFLREGLLFTALAASTFSLLFTAGERFATMVRPVAESGATKTSRVYGFIGLCWLLAALLGMLPLLGWNCLCAFDRCSSLLPLYSKRYILFCLVIFAGVLATIMGLYGAIFRLVQASGQKAPRPAARRKARRLLKTVLMILLAFLVCWGPLFGLLLADVFGSNLWAQEYLRGMDWILALAVLNSAVNPII
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM
Protein sequence:
MGSNGSELWFNKELEYSQQLTNGKMKEFFFLVSETMDWLNEHMLEVSKLQLESDIYELVRTPTKIKEKYSTPRLSPVHRCALPTPRMRLTSIQHQLEEAAVEGYKSGESNTVKEPKELHTATNTETQFDDDRDSTKLSSEYVKDDIVNKSTKGGVSPIKETRLPTNLPAFSPTSVERRFTEWNVPLRETSPSPSETADSPNKLPKQKHPAYSFVTLPKREEILKRPASLHSRVESTNSFINQLNRRRTKDNLTNNPEISLDEPIKALPSTTSDAPSSLLNTNVSSSPSKFRKFLSSVIPAKTDLSAKESLTSSTRLSTSYKTRKRSSGVAFSSETVTSSSKERKRSVENEMLKPHPTIFESPPEITSFDKSNAVEAEALTAKLKSNEERLPVSSQPGSDAKSQEFDFFEAKIPDSIAKLNELTASNENHYELKTYDRAERLRQKIQEVSSNKRLIPSTPPTKKPINAVLDAAKNSAAKDLHLAKMKLNNKNDESSLSPAKSHAVITQAPKIPLISTFTRLSTRKSSNDFNSSNSRPSSNALKSDANENTDSSLPPSKKEFIEKSLHKLSEPLHDDSRQNSDHNFAPHSRPIAIRVATASQRELEQTEKRKAKNGAANASNMESRSSENETHRFKKFYGKERELSNNEFPSRQTKTVTSANSSNIRDMEHTISDKPRSEPDAIPSSKSMHSNKPFEEKSEKPTTKRLVTNPSNVNASWHSNMLKRQEDLRKKKPLTDNGATSRHMLKSGLTRVTSKPTQRFANELAEDM

Annotated regions:
Protein sequence:
MNSIEFPLLDQIAQNSVISTTSNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRASPRQADLILTAGTVTMKMAPSLLRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITKLRKKISREIYEDRIKSQPKNRCFTINHKFRVGRSIHTGNYDQALLYKYKSPSTSEIPPETFFKYKNAASSRELVN

Annotated regions:
phrase: CCFIEFASLIGSRFDFDRYGLVPRASPRQADLILTAGTVTMKMAPSLLRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPGCPPKPEAVIDAITK
type: DOMAIN
name: NADH_UbQ_OxRdtase-like_20kDa
description: NADH:ubiquinone oxidoreductase-like, 20kDa subunit
Protein sequence:
MSLASKLSTIPEALDAIRAGRPVIVADDENRENEGDVILSAQLATPEVIAWAVRYSSGFLCAPMPQEWADRLDLPPMVAVNEDARSTAYTVSVDAADGVTTGISAHDRARTVNVLANPDSTPTSLIRPGHILPLRAVPGGVRERSGHTEAAVDLMRLAGVAPVGVIGEIVEDDGDMMRLPALLEMGEREGVPVITIEQLIAYLEEHEPSAASAAPFRRQVSLRADSTVPTSHGVFRFLAYKDRITGTDHLAIVKGDLSDGAPLVRVHSECLTGEAFGSLKCECGPQLDAALDAIEQDGGVVIYMRGHEGRGIGLINKLRAYALQERGYDTVDANTALGLPADARDYAAAAGILADLGVEKLRLLTNNTDKVSQLRALGIEVVEQVPLIVGVGPNNHQYLETKRDRMGHIIGEEALAAAVAQMHEGAGK

Annotated regions:
phrase: ADSTVPTSHGVFRFLAYKDRITGTDHLAIVKGDLSDGAPLVRVHSECLTGEAFGSLKCECGPQLDAALDAIEQDGGVVIYMRGHEGRGIGLINKLRAYALQERGYDTVDANTALGLPADARDYAAAAGILADLGVEKLRLLTNNTDKVSQLRALGIEVVEQV
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MTTKPFVNVIGAGLAGSEAAWQIAKRGVDVHLYEMRPVKMTPAHHTEQFAELVCTNSLRANQVTNAAGLIKEEMRRLDSIIIAAADENAVPAGGALAVDRTPFSQTVTDKLANHERVTVHHEELTAFPEGPTVVATGPLTSPGLAEEISALNGSEGLYFYDAAAPILDKNSIDFDKVYLKSRYDKGEAAYLNCPMTEAEFEAFYKALISAEVAEMHDFEDEKFFDGCMPIEVMAKRGIKTMLFGPLKPVGLENPKTGEQPYAVVQLRQDNAAASLYNIVGFQTHLKWGEQKRVFRMIPGLENAEFVRYGVMHRNTFMKSPDVLLPTYQSKQRSDLFFAGQMTGVEGYVESAASGLVAGINASRLALDTEPVTFPATTAMGSMAHYITHTSAKHFQPMNANFGIFEPLKQRIRDKKERNQALADRALASIDTFKETL

Annotated regions:
phrase: AGQMTGVEGYVESAASGLVAGIN
type: CONSERVED_SITE
name: MnmG-rel_CS
description: MnmG-related, conserved site

phrase: VNVIGAGLAGSEAAWQIAKRGVDVHLYEMRPVKMTPAHHTEQFAELVCTNSLRANQVTNAAGLIKEEMRRLDSIIIAAADENAVPAGGALAVDRTPFSQTVTDKLANHERVTVHHEELTAFPEGPTVVATGPLTSPGLAEEISALNGSEGLYFYDAAAPILDKNSIDFDKVYLKSRYDKGEAAYLNCPMTEAEFEAFYKALISAEVAEMHDFEDEKFFDGCMPIEVMAKRGIKTMLFGPLKPVGLENPKTGEQPYAVVQLRQDNAAASLYNIVGFQTHLKWGEQKRVFRMIPGLENAEFVRYGVMHRNTFMKSPDVLLPTYQSKQRSDLFFAGQMTGVEGYVESAASGLVAGINASRLAL
type: DOMAIN
name: MnmG_N
description: MnmG, N-terminal domain
Protein sequence:
MRVKGIRKNCQHLWRWGTMLLGMLMICSTAGQLWVTVYYGVPVWKEATTTLFCASDAKAYDTEAHNVWATHACVPTDPNPQEMNLPNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTNITTTATNNATVNSSGRTQEGGEIKNCSFYITTSLRDKIRKEYXXXXXXXXXXXXXXXXXXXXXSCNTSVXTQACPKISFEPIPIHYCAPAGFAILKCKEKNFDGKGPCRNVSTVQCTHGIRPVVSTQLLLNGSLAEDEIVIRSENFTDNAKTIIVQLNESVVINCTRPNNNTRKSIHIGPGRAFYTTGQIVGDIRQAYCNLSITKWGNTLHQVAKKLSEQFKNKTIVFNHSSGGDPEIVLHSFNCGGEFFYCNTTKLFNGTLHTNGTWYFNGTWNFTGESNSTENIILTCRIKQIINMWQEVGKAMYAPPISGQIRCSSNITGLLLTRDGGNNSTTNESETFRPEGGNMKDNWRSELYKYKVVQIEPLGVAPTKAKRRVVQREKRAIGIGAMFLGFLGAAGSTMGAASMTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLQDQQLLGIWGCSGKLICTTAVPWNASWSNKSLNDIWDNMTWMEWEKEISNYTNIIYTLIEESQNQQEKNEKELLELDKWASLWNWFDITKWLWYIKIFIMIVGGLVGLRIVFTVLSIVNRVRQGYSPLSFQTRSPAPRGPDRPEGIEEEGGEGDRDRSNRLVDGFLAIFWVDLRS

Annotated regions:
phrase: VQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLQDQQLLGIWGCSGKLICTTAVPWNASWSNKSLNDIWDNMTWMEWEKEISNYTNIIYTLIEESQNQQEKNEKELLELD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASMTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLQDQQLLGIWGCSGKLICTTAVPWNASWSNKSLNDIWDNMTWMEWEKEISNYTNIIYTLIEESQNQQEKNEKELLELDKWASLWNWFDITKWLWYIKIFIMIVGGLVGLRIVFTVLSIVNRVRQGYSPLSFQ
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKEATTTLFCASDAKAYDTEAHNVWATHACVPTDPNPQEMNLPNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTNITTTATNNATVNSSGRTQEGGEIKNCSFYITTSLRDKIRKEYXXXXXXXXXXXXXXXXXXXXXSCNTSVXTQACPKISFEPIPIHYCAPAGFAILKCKEKNFDGKGPCRNVSTVQCTHGIRPVVSTQLLLNGSLAEDEIVIRSENFTDNAKTIIVQLNESVVINCTRPNNNTRKSIHIGPGRAFYTTGQIVGDIRQAYCNLSITKWGNTLHQVAKKLSEQFKNKTIVFNHSSGGDPEIVLHSFNCGGEFFYCNTTKLFNGTLHTNGTWYFNGTWNFTGESNSTENIILTCRIKQIINMWQEVGKAMYAPPISGQIRCSSNITGLLLTRDGGNNSTTNESETFRPEGGNMKDNWRSELYKYKVVQIEPLGVAPTKAKRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MKPARQAVDGVLLLNKPVGITSNAALQKAKWLLNAKKAGHTGTLDPFADGLLPLCFGEATKFSAYLLDADKRYRAILQLGVTTRTGDPEGEVLATREVRATCADIRAALPAFVGEIEQIPPMHSALKHQGRPLYEYARAGVEIARAPRRVHIRALDLFKCAPPRAVVDVQCSAGTYVRTLAEDLGNALGCGAHLTALTRTASGGFLLEQAHTLAELEATNAGARQALLLPADCLVAHLPSVHLGETAAASLRQGRSVPDAADRRGLVRVYDGHGVFVGLAEAEAGKLVPRRLIATVQA

Annotated regions:
phrase: KWLLNAKKAGHTGTLDPFADGLLPLCFGEATKFSAYLLDADKRYRAILQLGVTTRTGDPEGEVLATREVRATCADIRAALPAFVGEIEQIPPMHSALKHQGRPLYEYARAGVEIARAPRRVHIRALDLFKCAPPRAVVDVQCSAGTY
type: DOMAIN
name: PsdUridine_synth_N
description: Pseudouridine synthase II, N-terminal

phrase: RTLAEDLGNALGCGAHLTALTRTASGGFLLEQAHTLAELEATNAGARQALLLPADCL
type: DOMAIN
name: TruB_C
description: tRNA pseudouridylate synthase B, C-terminal

phrase: PSVHLGETAAASLRQGRSVPDAADRRGLVRVYDGHGVFVGLAEAEAGKLVPRRL
type: DOMAIN
name: tRNA_sdUridine_synth_fam1_C
description: tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal
Protein sequence:
MSLLGRDYNSELNSLDNGPQSPSESSSSITSENVHPAGEAGLSMMQTLIHLLKCNIGTGLLGLPLAIKNAGLLVGPVSLLAIGVLTVHCMVILLNCAQHLSQRLQKTFVNYGEATMYGLETCPNTWLRAHAVWGRYTVSFLLVITQLGFCSVYFMFMADNLQQMVEKAHVTSNICQPREILTLTPILDIRFYMLIILPFLILLVFIQNLKVLSVFSTLANITTLGSMALIFEYIMEGIPYPSNLPLMANWKTFLLFFGTAIFTFEGVGMVLPLKNQMKHPQQFSFVLYLGMSIVIILYILLGTLGYMKFGSDTQASITLNLPNCWLYQSVKLMYSIGIFFTYALQFHVPAEIIIPFAISQVSESWALFVDLSVRSALVCLTCVSAILIPRLDLVISLVGSVSSSALALIIPALLEIVIFYSEDMSCVTIAKDIMISIVGLLGCIFGTYQALYELPQPISHSMANSTGVHA

Annotated regions:
phrase: LSMMQTLIHLLKCNIGTGLLGLPLAIKNAGLLVGPVSLLAIGVLTVHCMVILLNCAQHLSQRLQKTFVNYGEATMYGLETCPNTWLRAHAVWGRYTVSFLLVITQLGFCSVYFMFMADNLQQMVEKAHVTSNICQPREILTLTPILDIRFYMLIILPFLILLVFIQNLKVLSVFSTLANITTLGSMALIFEYIMEGIPYPSNLPLMANWKTFLLFFGTAIFTFEGVGMVLPLKNQMKHPQQFSFVLYLGMSIVIILYILLGTLGYMKFGSDTQASITLNLPNCWLYQSVKLMYSIGIFFTYALQFHVPAEIIIPFAISQVSESWALFVDLSVRSALVCLTCVSAILIPRLDLVISLVGSVSSSALALIIPALLEIVIFYSEDMSCVTIAKDIMISIVGLLGCIFGTYQ
type: DOMAIN
name: AA_transpt_TM
description: Amino acid transporter, transmembrane domain
Protein sequence:
MEPERLKFGGPRELCGAADLISQFKLVQHHEFFCKKSLPVSLSDSHYLHNVVGDTEIRKGEGMQLDQLIESISQSRETNIRIQPFDIDELQESFQLNDMTPVELPPAEKGAPTIPSKSKSESKDRDRKHKKHKDRDKDKDREHKKHKHKHKDRSKDKDKDKDRDRKKDKNGHHDSGDHSKKHHDKKRKHDGDEDLNDVQRHKKNKHKSSKLDEVGAIRVAG

Annotated regions:
Protein sequence:
MRRLIAANWKMNKTVKETEEYINTFLKFVEHPESREILICPPFTSLYVAGKMLQGTGVKLGAQNCHYEKRGAFTGEISIPMLQEVGCEYVIVGHSERRHIFGESDELIHKKIVACLEMGIRPILCVGEKKEEREAGMTFKVIETQIKLALTGVEEHTDKIDIAYEPVWAIGTGTPATPEDAVEVHTFIRNLINQLNPKNEGKTRILYGGSVNPQNAKEFMKHEEINGLLVGTASLDPESFAKIVYSF

Annotated regions:
phrase: AYEPVWAIGT
type: ACTIVE_SITE
name: Triosephosphate_isomerase_AS
description: Triosephosphate isomerase, active site
Protein sequence:
MIFNFLNKASNKTHTKLLLFSSIRNRILINNISSTSKWSSINNNNKQSSVSKTNIFIITTHNKQQQQLSKSFSTINNNTKPISDVNLFHDIVDEEFELFVDRLEILSEANTCEGFEVEGNDGVLTIIVGNKGTYVINKQTPNRQIWWSSPLSGPKRFDYDSVEKRWVDNRDGTPLRQLLNSEINTLCKYDMEI

Annotated regions:
phrase: VINKQTPNRQIWWS
type: CONSERVED_SITE
name: Frataxin_CS
description: Frataxin conserved site
Protein sequence:
MPSSALLCCLVLLAGVKASQGTNTQSEDSCAHFPAGLPHMLRELRAAFGRVKTFFQTQDQLDNVLLNKSLLEDFKGYLGCQALSEMIQFYLVEVMPKAENHDPDIKEHVSSLGEKLKTLRLRLRRCHRFLPCENKSKAVEQVKNTFNKLQEKGVYKAMSEFDIFINYIEAYMTRKLTN

Annotated regions:
phrase: KGYLGCQALSEMIQFYLVEV
type: CONSERVED_SITE
name: IL-10_CS
description: Interleukin-10, conserved site
Protein sequence:
MPAVLPIKLNPSQMRPVAYRIFSKKHGLNLKSTGLETLTEIIGKNYGTEWRGAEAAKMMEEICRLWKEQEMGVFVEGKPLQELFDEITASKKAKEKARVQVVSKSVGLTGVEEIEDREGEPQVNVIREAAPSVDVVWKEFFKVISAFDQPLFHYNARQQRFEKRKTKPTLFANAQSASNMFLTRYHLVYNRLLRNDDTTDLKITSIRSLIGRQGEFSIFGMLSKNPEQKICLQDDTGRILLILAAGCKPDPGVYYPEGSFVICNGRYMKSGDAEVFVVITMGPPVAEKRQETITAYGNMDYLGLHGNPHGSVVRRIERQVEASMLAEEKRLVDQKVIVFGGDMYLDNPLTLKALQKVFSTIELEFQDSGTKKPLAMVFSGDFTSQYQPPHLYKKGFDKLEELFKEFSSIITGVKIIFVPGQRDPWTNTFPTQNAVVPLQPLPTTMINRVARLCGEDVSMSSNPCRMAYLTQDMVFYRDGLSERLRKCNLQLDSAKDDSDDSDDDIEIDNDEVMINDVVVNEPESSFDFGEGLSNLTRPVDISTPMASQVGPTNTLSAKEVESRKIVRTICDQGHLSPFNRHDRPVAWDYDETLWLSPLPTILFMVDTHAPKFSLRYEECMVVNPGPFLNRKIASWVEYDPSKKTVKERQLHI

Annotated regions:
phrase: IVFGGDMYLDNPLTLKALQKVFSTIELEFQDSGTKKPLAMVFSGDFTSQYQPPHLYKKGFDKLEELFKEFSSIITGVKIIFVPGQRDPWTNTFPTQNAVVPLQPLPTTMINRVARLCGEDVSMSSNPCRMAYLTQDMVFYRDGLSERLRKCNLQLDSAKDDSDDSDDDIEIDNDEVMINDVVVNEPESSFDFGEGLSNLTRPVDISTPMASQVGPTNTLSAKEVESRKIVRTICDQGHLSPFNRHDRPVAWDYDETLWLSPLPTILFMVDTHA
type: DOMAIN
name: DNA_pol_a/d/e_bsu
description: DNA polymerase alpha/delta/epsilon, subunit B
Protein sequence:
MSKLYRPEAFVMPQGIYMDGNSLGLMPHSARRAVERRLNDWAEQAVMGWDRWFDLSETLSPQVARLVGAQPDEVISTGSITTNLHLLISTFYRPEGERRHLLATELDFPSDLYAMRSWADLHGAELRLIPSRDGQTLHPDDIAAAITDEIALVLLPVVLYRSGQLLDMPRWTEYAHAQGCVVGWDAAHSIGALPHNFHDDGADFAVWCTYKYLNAGPGAPGGLFVHERHLGTMPALRGWWGNDKTSQFKMAGDYERGAGAGAFQLGTPGILSLAGLEGALEVYDGVDLQELRARSLELTELLMTLADEQLPEMQMVTPRDPAERGGHISLQWEHNKQVSLALRARGIVPDFREPGILRLAPIPFYNSEDDVRRTVQVIREIVDSGEYREIVDGGAVS

Annotated regions:
Protein sequence:
MSDTESMSSQVAPEQAEPQQPENTDPEAQRQAVAPRRPGQLIFAGPRRAKPPRHLADLTVAERREAVAALGEKPFRADQLSRHYFERLISDPAEMPDLSQKLRDKLGPELLPRLLTSVRDLACDGGKTHKTVWKAFDGVLFESVLMRYPERVTMCVSSQAGCGMNCPFCATGQAGLTRNLSTGEIVEQVAGGQRALNRGDIAGGPGRVSNIVFMGMGEPLANYKAVLGAVRRITEPSPSGLGISQRGVTVSTVGLVPAIHKLTEEGLSVRLAVSLHAPDDELRDTLVPINTRFKVREVLDAAFGYARKSGRRVSIEYALIKDVNDHAWRADLLGKLLKGKLVHVNLIPLNPTPGSKWTASRPEDEREFVRRLEAHGVAVTVRDTRGREIDGACGQLAAATQS

Annotated regions:
phrase: VTMCVSSQAGCGMNCPFCATGQAGLTRNLSTGEIVEQVAGGQRALNRGDIAGGPGRVSNIVFMGMGEPLANYKAVLGAVRRITEPSPSGLGISQRGVTVSTVGLVPAIHKLTEEGLSVRLAVSLHAPDDELRDTLVPINTRFKVREVLDAAFGYARKSGRRVSIEYALIKDVNDHAWRADLLGKLLKGKLVHVNLIPLNPTPGSKWTASRPEDEREFVRRLE
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: LADLTVAERREAVAALGEKPFRADQLSRHYFERLISDPAEMPDLSQKLRDK
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: SSQAGCGMNCPFCATGQAGLTRNLSTGEIVEQVAGGQRALNRGDIAGGPGRVSNIVFMGMGEPLANYKAVLGAVRRITEPSPSGLGISQRGVTVSTVGLVPAIHKLTEEGLSVRLAVSLHAPDDELRDTLVPINTRFKVREVLDAAFGYARKSGRRVSIEYALIKDVNDHAW
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: YPERVTMCVSSQAGCGMNCPFCATGQAGLTRNLSTGEIVEQVAGGQRALNRGDIAGGPGRVSNIVFMGMGEPLANYKAVLGAVRRITEPSPSGLGISQRGVTVSTVGLVPAIHKLTEEGLSVRLAVSLHAPDDELRDTLVPINTRFKVREVLDAAFGYARKSGRRVSIEYALIKDVNDHAWRADLLGKLLKGKLVHVNLIPLNPTPGSKWTASRPEDEREFVRRLEAHGVAVTVRDTRGR
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MPSQVMDQRHHMSQYSHPTLAASSFSEELRLPTERQVGFWKQESLPHHMGSKSVASSPIEKPQPIGTRMAGRLELLQPYKLRDQGAAFSLEHKLFGQERHANLPPSPWRPDQETGRQTDSSLKSAALFSDGRINPNGAYNENGLFSSSVSDIFDKKLRLTSKNGLVGQSIEKVDLNHVDDEPFELTEEIEAQIIGNLLPDDDDLLSGVVDEVGYPTNANNRDDADDDIFYTGGGMELETDENKKLQEFNGSANDGIGLLNGVLNGEHLYREQPSRTLFVRNINSNVEDSELKLLFEHFGDIRALYTACKHRGFVMISYYDIRSALNAKMELQNKALRRRKLDIHYSIPKDNPSEKDINQGTIVLFNVDLSLTNDDLHKIFGDYGEIKEIRDTPQKGHHKIIEFYDVRAAEAALRALNRNDIAGKKIKLETSRLGAARRLSQHMSSELCQEEFGVCKLGSPSTSSPPIASFGSTNLATITSTGHENGSIQGMHSGLQTSISQFRETSFPGLSSTIPQSLSTPIGISSGATHSNQAALGEISQSLGRMNGHMNYSFQGMSALHPHSLPEVHNGVNNGVPYNLNSMAQVVNGTNSRTAEAVDNRHLHKVGSGNLNGHSFDRAEGALGFSRSGSSSVRGHQLMWNNSSNFHHHPNSPVLWPSPGSFVNNVPSRSPAQMHGVPRAPSSHMIDNVLPMHHLHVGSAPAINPSLWDRRHGYAGELTEAPNFHPGSVGSMGFPGSPQLHSMELNNIYPQTGGNCMDPTVSPAQIGG

Annotated regions:
phrase: VLFNVDLSLTNDDLHKIFGDYGEIKEIRDTPQKGHHKIIEFYDVRAAEAALRALNRNDIAGKKI
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: LFVRNINSNVEDSELKLLFEHFGDIRALYTACKHRGFVMISYYDIRSALNAKMELQNKALRRRK
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: GTIVLFNVDLSLTNDDLHKIFGDYGEIKEIRDTPQKGHHKIIEFYDVRAAEAALRALNRNDIAGKKIKLETSR
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: TLFVRNINSNVEDSELKLLFEHFGDIRALYTACKHRGFVMISYYDIRSALNAKMELQNKALRRRKLDI
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: TIVLFNVDLSLTNDDLHKIFGDYGEIKEIRDTPQKGHHKIIEFYDVRAAEAALRALNRNDIAGKKIKL
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: RTLFVRNINSNVEDSELKLLFEHFGDIRALYTACKHRGFVMISYYDIRSALNAKMELQNKALRRRKLDIHYSI
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: SRTLFVRNINSNVEDSELKLLFEHFGDIRALYTACKHRGFVMISYYDIRSALNAKMELQNKALRRRKLDIHYSIPK
type: DOMAIN
name: MEI2-like_RRM1
description: MEI2-like, RNA recognition motif 1
Protein sequence:
MGDRGGPAAGGGARRRRGGAPGARPPPDPDPDPDPALGGGPAGPEQEFRCHKLQESLLSSASGYSNYRGVLNWCVIMLILSNARLFLENLIKYGILVDPIQVVSLFLKDPYSWPSLCLIIVANVFAVVALTLERRLAAGSMSEAAGAFLHTLNLVAILFFPAAVVLMVTSITPVGSVFALAIYTVLFLKLFSFRDVNGWCRQRREAKAGGQDAAPEGRKANGAVGPSGVTYPGNLTYGNLYYFLFAPTLCYELNFPRSPRIRKRFLLRRLFEMLFFIQLLVGLIQQWMVPTIQNSMKPFRDMDYSRIIERLLKLAVPNHLIWLIFFYWFFHSCLNVVAEVLQFGDREFYRDWWNSESVTYFWQNWNIPVHKWCLRHFYKPMLRRGASKWAAQAAVFLASAFFHEYLVSVPLKMFRLWAFMGMAAQIPLAWFVSRFLRGNYGNAAVWISLIIGQPVAVLMYVHDYYVLNYEGRP

Annotated regions:
Protein sequence:
MSEHNIAAIILAAGKGTRMKSQMPKVLHKVANRPMLGHVMEAASAAGCAPTVVVTSPDMPEVAEYARKRECQIAHQEVQLGTGHAVQCAQDALADHHGHVVVLFGDSPLILPDTISQLAEVLNRDAETAVAVFGFDVPTPPAYGRLITSGNGELERIVEAKDASPEELAVTVCNSGVMAIRGSLVWNLLAAIDNQNAQEEYYLTDIIAAARAEGYRCRVVMGDETEALGINSRQQLAQVERLMQTRLRNTAMDEGVTLQDPASTFLSADTEYGTDITIQPGVFIGPDVVIGDGVEIRAFSHLEGCVIGDRALIGPYARIRPGSNIGAESKIGNFVELKKAELEEGVKVSHLSYIGDAFIGAESNIGAGTITCNYDGYKKYHTEIGKDVFIGSNSALVAPIVIGSGAYVGAGSVVTDNVASDGLAIARSRQEVKEAWGKAFRERMEQDS

Annotated regions:
phrase: HTEIGKDVFIGSNSALVAPIVIGSGAYVGAGSVV
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: GCVIGDRALIGPYARIRPGSNIGAESKIGNFVEL
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: IGSNSALVAPIVIGSGAYVGAGSVVTDN
type: CONSERVED_SITE
name: Hexapep_transf_CS
description: Hexapeptide transferase, conserved site

phrase: AIILAAGKGTRMKSQMPKVLHKVANRPMLGHVMEAASAAGCAPTVVVTSPDMPEVAEYARKRECQIAHQEVQLGTGHAVQCAQDALADHHGHVVVLFGDSPLILPDTISQLAEVLNRDAETAVAVFGFDVPTPPAYGR
type: DOMAIN
name: MobA-like_NTP_Trfase
description: MobA-like NTP transferase

phrase: GVTLQDPASTFLSADTEYGTDITIQPGVFIGPDVVIGDGVEIRAFSHLEGCVIGDRALIGPYARIRPGSNIGAESKIGNFVELKKAELEEGVKVSHLSYIGDAFIGAESNIGAGTITCNYDGYKKYHTEIGKDVFIGSNSALVAPIVIGSGAYVGAGSVVTDNVASDGLAIARSR
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain
Protein sequence:
VPLNKETGEVTDDTRIKAALPTIKYAIDQGGKVILMSHLGRPKGVKDPKYSLKPVAKRLEELLGHHVSFVDDCIGEGPRKVVEAMKDGEIVLLENVRFHKEEKNNDPEFAKSLASLGDIHVNDAFGTAHRAHASNVGVAKHLTSVAGFLMEKEILMLGKAVEKPEHPYVVILGGAKVSDKIGVITNLLEKADRILIGGAMMFTFLRALGKKVGDSLVEEDKIELAKNILKTAREKGVEFILPVDTIIAQTIEAGVEKKVVSIDEGIPSGWKGLDIGPRTIELFKEKLNDAKTVVWNGPMGVFEIDDFATGTEEIAKALASLKGADTIIGGGDSAAAINKFNLANKVSHVSTGGGASLEMLEGKVLPGIASIAEEDIKKKRRLTIAGNWKMNKTPTEAKLFAGVLAAEIGLEDSLDIVVCPPSIDIPAVADVLKDTKIGVGAQNIYPKESGAFTGEISVTMLKDLGVKYVIVGHSERRHIFGESDELINEKNKFALKENLIPIFCIGETLEEREAGRTFEVLRSQIIKGLKDISANEIMRMIIAYEPVWAIGTGKVATPEQADKAMGYVRKLLGELYSMEIADQLKILYGGSIKPDNFDSLIKMENIDGGLVGGASLKESFIELVRIAKNYL

Annotated regions:
phrase: AYEPVWAIGT
type: ACTIVE_SITE
name: Triosephosphate_isomerase_AS
description: Triosephosphate isomerase, active site
Protein sequence:
MLRKLQKYWKKSIIFQRFTWMIGIVFIYMLGRQIPIPTVGVDKVVVGNASDSQLLENFGAITGIQFSNMTLFSLGIGPTMTMMILWRFLITFKLIGSWTSNKVNRLQFLLTLAIALLQSFGITNDSKFLLIFGYSHSTLRIITIILLTTGTFILNWLCKINSERGIGGMTVVILVNMILTFQSNIIRYFSVQQFKFSSLIQYGLVFFVALSILIWFNILLYKGEYRIPIQRVGLNTPYHASSYLPIRVTPAGAMPFMYGMTLMMLPPYIFVVLLHIFPGNQILEYLSVHIGLSQLPGVICYIFLLYFLSIGFAYYNYDPYEISKNMRNNGDYISGKKPGEETIKYIQYVVNSFAQFGAFTVIIFGGLPMLAVLLQGQGKNSVSIALLISNAYIIVSLLLGVIEQVDTMNSWKKYKNLI

Annotated regions:
Protein sequence:
MNIITGGVTAAKGFQAASAAAGIKYQGRTDMAMVYSEVPCKAAGTFTTNIVKAAPVKWDQDIVYNQPEAQVIICNSGIANACTGKEGFECCRETALAAAKTLKVDPDSVLVASTGVIGMQLPVQKLAAGVEAMAPELDGGLEAGNQAAKAIMTTDTVEKEAAVQVEIGGKTVTVGGMCKGSGMIHPNMCTMLGFVTTDVNISKELLQEALSQDVKDTYNMVSVDGDTSTNDTVLLLANGMAGNPEITEKNEDYRAFCQALNYVNTQLAKKIAGDGEGATALFEVKIIGAESKEQAVTLSKSVVTSSLTKAAIYGHDANWGRILCAMGYSGAQFDPEKVDLYFESRAGKIKIIENGVSTGYSEEEATKILSEDAVTAIADIKMGDCTATAWGCDLTYDYVKINADYRS

Annotated regions: