nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSTDQMTQLDESQIETNYDKVVYEFDDMNLNEKLLRGVFGYGFNKPSAIQQRAIMPIIEGNDVLAQAQSGTGKTGTFSIAALQRIDPAIKAPQALMLAPTRELALQIQKVVMALGFHMDIKVHACIGGTSFVEDAEGLRDAQIVVGTPGRVFDNIQRRKFKVDNIKMFILDEADEMLSTGFKEQIYQIFTMLPPTTQVVLLSATMPRDVLEVTAKFMQNPVRILVKKDELTLEGIKQFYVNVEEEQFKYDCLTDLYDSISVTQAVIFCNTRRKVEELTQRLTADNFTVSSIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPTNKENYIHRIGRGGRFGRKGVAINFIVNEDVQALRELEQFYSTQIEELPSDIGTLFT

Annotated regions:
phrase: GIKQFYVNVEEEQFKYDCLTDLYDSISVTQAVIFCNTRRKVEELTQRLTADNFTVSSIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPTNKENYIHRIGRGGRFGRKGVAINFIVNEDVQALRELEQFYSTQIEELPSDIGTL
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: EELTQRLTADNFTVSSIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPTNKENYIHRIGRGGRF
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: GFNKPSAIQQRAIMPIIEGNDVLAQAQSGTGKTGTFSIAALQRIDPAIKAPQALMLAPTRELALQIQKVVMALGFHMDIKVHACIGGTSFVEDAEGLRDAQIVVGTPGRVFDNIQRRKFKVDNIKMFILDEADEMLSTGFKEQIYQIFTMLPPTTQVVLLSATMPRDVLEVTAKFMQNPVRILVKKDELTLEGIKQ
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: ILDEADEM
type: CONSERVED_SITE
name: RNA-helicase_DEAD-box_CS
description: ATP-dependent RNA helicase DEAD-box, conserved site

phrase: YEFDDMNLNEKLLRGVFGYGFNKPSAIQ
type: DOMAIN
name: RNA_helicase_DEAD_Q_motif
description: RNA helicase, DEAD-box type, Q motif

phrase: KYDCLTDLYDSISVTQAVIFCNTRRKVEELTQRLTADNFTVSSIYSDLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPTNKENYIHRIGRGGRF
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: AIQQRAIMPIIEGNDVLAQAQSGTGKTGTFSIAALQRIDPAIKAPQALMLAPTRELALQIQKVVMALGFHMDIKVHACIGGTSFVEDAEGLRDAQIVVGTPGRVFDNIQRRKFKVDNIKMFILDEADEMLSTGFKEQIYQIFTMLPPTTQVVLLSATMPRDVL
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: FDDMNLNEKLLRGVFGYGFNKPSAIQQRAIMPIIEGNDVLAQAQSGTGKTGTFSIAALQRIDPAIKAPQALMLAPTRELALQIQKVVMALGFHMDIKVHACIGGTSFVEDAEGLRDAQIVVGTPGRVFDNIQRRKFKVDNIKMFILDEADEMLSTGFKEQIYQIFTMLPPTTQVVLLSATMPRDVLEVTAKFMQNPVRI
type: DOMAIN
name: EIF4A_DEADc
description: ATP-dependent RNA helicase eIF4A, DEAD-box helicase domain

phrase: IMPIIEGNDVLAQAQSGTGKTGTFSIAALQRIDPAIKAPQALMLAPTRELALQIQKVVMALGFHMDIKVHACIGGTSFVEDAEGLRDAQIVVGTPGRVFDNIQRRKFKVDNIKMFILDEADEMLSTGFKEQIYQIFTMLPPTTQVVLLSATMPRDVLEVTAKFMQNPVR
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain
Protein sequence:
MVIQTNLSYRFFILIVFLFTLANPKSDSDLKNELVSLRSTAESGVISFNNDDVSKFITSVSTPRPYSLIIFFDAVHLHGNSQLRLPEFRREFRLVSATFITNNNNESNGTKLFFCEIESTHSEASFRRFAVESLPHISLVSPTTENLTESDQMDGGDFTGLAESMAEFVERQTKLTVCSIQRPPLISKTQIGIIVAIIIISTPILIKKILKGETLLHDHRIWLVGAVFVYFFSVSGTMHNIIREMPMYIKDYEDSSKFVFFIEESEMQLGAEGFFVGFLYTVVGLLLAFVTNVVVRVKKLDEQRMAMLLALSISFWAVRKVVYLDNWKTGYEIYPYWPSSWRG

Annotated regions:
Protein sequence:
MSRNQPPKIAIVAGEHSGDLLGAGLMQAIAKRHPNATFIGVGGPLMAERGMDSFFAMDDLAVMGIAEVFQQLPKLLKHRKNLVNYLISEQPDVMIGIDAPDFNLTVEARLKKAGISTIHYVSPSVWAWREGRIKGIKKAVDHVLCLLPFEKDFYDKHQLPATFVGHPLADDIPMQWQQTEARNELELEPAVMYLAILPGSRKGEIARMAPVFLKVANKLAERYPELRFVAPMISEARAAQFRELVDQYSPELNIVLPVGESRKVMAAANYLLLTSGTVALEALLIKRPMVVAYRFHWLSYQIIKRLFHAPFFSLPNLLAGKEIVPELAQSDASEEAIEQALVQLIEQDNEPLLEQFTNIHQQLQVSASEKAADVVESFL

Annotated regions:
Protein sequence:
MTRKLVLLRHGQSQWNLDNRFTGWVDVDLTEQGRQEAAAAGKLMKDEGLQFDVAYTSVLKRAIHTLQGALKELDQDWLPVHKSWRLNERHYGGLQGLDKAETAAKHGEEQVKIWRRSYDIPPPAMDVTDPGHPGHDRRYATLDRNALPGTESLATTLVRVLPYWHDAIAPQLKAGQTVLVTAHGNSLRALYKYLNDISNAQILELNIPTGIPLLFELDDNLQVQSYRYLGDPEAAKRAAEAVANQGKAK

Annotated regions:
phrase: LLRHGQSQW
type: ACTIVE_SITE
name: PG/BPGM_mutase_AS
description: Phosphoglycerate/bisphosphoglycerate mutase, active site
Protein sequence:
MSHAVKIYDTCIGCTQCVRACPLDVLEMVPWDGCKAGQIASSPRTEDCVGCKRCETACPTDFLSIRVYLGDETSRSMGLSY

Annotated regions:
phrase: SHAVKIYDTCIGCTQCVRACPLDVLEMVP
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: GQIASSPRTEDCVGCKRCETACPTDFLSIRV
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: CVGCKRCETAC
type: CONSERVED_SITE
name: 4Fe4S_Fe_S_CS
description: 4Fe-4S ferredoxin, iron-sulphur binding, conserved site

phrase: TCIGCTQCVRACPLDVLEMVPWDGCKAGQIASSPRTEDCVGCKRCETACPT
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain
Protein sequence:
MATVQLSTQFSCQTRVSISPNSKSISKPPFLVPVTSIIHRPMISTGGIAVSPRRVFKVRATDTGEIGSALLAAEEAIEDVEETERLKRSLVDSLYGTDRGLSASSETRAEIGDLITQLESKNPTPAPTEALFLLNGKWILAYTSFVNLFPLLSRGIVPLIKVDEISQTIDSDNFTVQNSVRFAGPLGTNSISTNAKFEIRSPKRVQIKFEQGVIGTPQLTDSIEIPEYVEVLGQKIDLNPIRGLLTSVQDTASSVARTISSQPPLKFSLPADNAQSWLLTTYLDKDIRISRGDGGSVFVLIKEGSPLLNP

Annotated regions:
phrase: RLKRSLVDSLYGTDRGLSASSETRAEIGDLITQLESKNPTPAPTEALFLLNGKWILAYTSFVNLFPLLSRGIVPLIKVDEISQTIDSDNFTVQNSVRFAGPLGTNSISTNAKFEIRSPKRVQIKFEQGVIGTPQLTDSIEIPEYVEVLGQKIDLNPIRGLLTSVQDTASSVARTISSQPPLKFSLPADNAQSWLLTTYLDKDIRISRGDGGSVFV
type: DOMAIN
name: PAP/fibrillin_dom
description: Plastid lipid-associated protein/fibrillin conserved domain
Protein sequence:
MQKIFRPFQLTRGFTSSVKNFRQWRLIETRKIAKQPNYQVGDAKPLHMPKERKKFPDYKYGESNIFKQSNKGLYGGSFVQFGNNISESKAKTRKKWLPNVVKKGLWSETLNRKISIKMTAKVLKTISKEGGIDNYLTKEKSARIKELGPTGWKLRYRVLKRKDEIENPPHKDAPIIEMAGGKKAKIYYDEIVNGSPRKISVGRRRLMSFLYPLEKLEYRSVGKDLNYKKFVELFADVPVKDILARLEDHKFDLSTITV

Annotated regions:
Protein sequence:
MNYMRTAVLLAGLTALFMVVGFAIGGKGGMMVALLVAAGMNLFSYWYADKIVLGMYGAREVDMRTAPEFVAMVAELARRAELPMPKVYIIDNPQPNAFATGRNPQNAAVAATTGLLQTLNPDEVAGVMAHELAHVKHHDTLTMTITASIAGAISMLANFGLFFGGGNRESNNPFGGISAILMAILAPIAAMVVQMAISRSREYEADRGGAEICGQPLALASALAKIAGGAHAVPNYAAEANPATAHMFIINPLSGARMDNLFSTHPNTENRIAALEDLARQMGGYRPAPARAAPARGPWGGNTGGTRRGPWG

Annotated regions:
phrase: PEFVAMVAELARRAELPMPKVYIIDNPQPNAFATGRNPQNAAVAATTGLLQTLNPDEVAGVMAHELAHVKHHDTLTMTITASIAGAISMLANFGLFFGGGNRESNNPFGGISAILMAILAPIAAMVVQMAISRSREYEADRGGAEICGQPLALASALAKIAGGAHAVPNYAAEANPATAHMFIINPLSGARMDNLFSTHPNTENRIAALED
type: DOMAIN
name: Peptidase_M48
description: Peptidase M48
Protein sequence:
MPTYSPKAGDVTRQWYVIDATDVVLGRLAVQAANLLRGKNKPTYAPHVDGGDFVIIINAEKVAISGNKRQDKLIHHHSGHPGGLKSRTVGQVLETRPERLVEKAVKGMIPKNKLGNAIAGKLKVYAGPNHPHAAQQPVPFEIKQVAQ

Annotated regions:
phrase: VKGMIPKNKLGNAIAGKLKVYA
type: CONSERVED_SITE
name: Ribosomal_uL13_CS
description: Large ribosomal subunit protein uL13, conserved site
Protein sequence:
MPPIKRQPGGWVLPGYKYLGPFNPLENGEPVNKADRAAQAHDKSYSELIKSGKNPYLYFNKADEKFIDDLKDDWSLGGIIGSSFFKLKRAVAPALGNKERAQKRHFYFANSNKGAKKTKNNEPKPGTSKMSENEIQDQQPSDSMDGQRGGGGGATGSVGGGKGSGVGISTGGWVGGSYFTDSYVITKNTRQFLVKIQNNHQYKTELISPSTSQGKSQRCVSTPWSYFNFNQYSSHFSPQDWQRLTNEYKRFRPKGMHVKIYNLQIKQILSNGADTTYNNDLTAGVHIFCDGEHAYPNATHPWDEDVMPELPYQTWYLFQYGYIPVIHELAEMEDSNAVEKAICLQIPFFMLENSDHEVLRTGESTEFTFNFDCEWINNERAYIPPGLMFNPLVPTRRAQYIRRNNNPQTAESTSRIAPYAKPTSWMTGPGLLSAQRVGPATSDTGAWMVAVKPENASIDTGMSGIGSGFDPPQGSLAPTNLEYKIQWYQTPQGTNNNGNIISNQPLSMLRDQALFRGNQTTYNLCSDVWMFPNQIWDRYPITRENPIWCKKPRSDKHTTIDPFDGSLAMDHPPGTIFIKMAKIPVPSNNNADSYLNIYCTGQVSCEIVWEVERYATKNWRPERRHTTFGLGIGGADNLNPTYHVDKNGTYIQPTTWDMCFPVKTNINKVL

Annotated regions:
phrase: FPNQIWDRYPITRENPIWCKKPRSDKHTTIDPFDGSLAMDHPPGTIFIKMAKIPVPSNNNADSYLNIYCTGQVSCEIVWEVERYATKNWRPER
type: DOMAIN
name: Parvovirus_coat
description: Parvovirus coat protein VP2

phrase: GGGKGSGVGISTGGWVGGSYFTDSYVITKNTRQFLVKIQNNHQYKTELISPSTSQGKSQRCVSTPWSYFNFNQYSSHFSPQDWQRLTNEYKRFRPKGMHVKIYNLQIKQILSNGADTTYNNDLTAGVHIFCDGEHAYPNATHPWDEDVMPELPYQTWYLFQYGYIPVIHELAEMEDSNAVEKAICLQIPFFMLENSDHEVLRTGESTEFTFNFDCEWINNERAYIPPGLMFNPLVPTRRAQYIRRNNNPQTAESTSRIAPYAKPTSWMTG
type: DOMAIN
name: Parvovirus_coat
description: Parvovirus coat protein VP2

phrase: GWVLPGYKYLGPFNPLENGEPVNKADRAAQAHDKSYSELIKSGKNPYLYFNKADEKFIDDLKDDWSLGGIIGSSFFKL
type: DOMAIN
name: Phospholipase_A2-like
description: Phospholipase A2-like domain
Protein sequence:
MEQERIMQRVQKDVRSLLIASKNGLSIQELEQDYRMMIGSQIPLRSLGYKSTMELLLDMPNVVQIHTQMDGTVNLSAVVDEATRKIADLVSCQKDRSTARSRNRRRNIRPRCPVDLVRRGRVSPVLPATVKSDLRDLLSLSPLLLSELEKAFFSRFGRSFQYTRYGFYSMLEVLRSISDIVEVKQTRTGSLLVLRKSETGHISASLCVKKSLDCQPAAVPNKTSCVFEKCLNEPQRPEKKPSEPATSLKISPPEFQKFSSQEPQSITSSRSFLHSSSNKEPDVNRNVSLGESKKSIENKTSPAVPSNNVVLNNSLVKNSETFESLFTRMSKPVSHVEADHANASEPNSSDLNWLEKKLEKELKLCLARKGAGGSVSDDLRSDIKHVVNQHSNGLNISLLPTAFKSFTGKDLPFKELGFMSVMELVGSLGDILCLESTDEGKDWKLFGAKKEDLVDEFSAGLRSTNSSLSSWNSTRQSTAPLKPVGTIFSKVDEKLWWGPLELKVCSTEQIDIPPDAVRNQKLHCLPRIKHSLMIGVYVESIESPSQFYVRCCGKDTSEKLEDMMIEMRHCYSNECVSERYIVPDNCISVGQIYALRVPGDVWWYRVIVHSIKNSELLDVFYPDFGNVATVKKSWLRFLKNCYMKVPAQAVPSSLPFVTSTEAQWSTQAIKRFRQLCSCLPLVGLVLQYVQDVLVIFLCDTSSAEDVYLHQLLIAQGLAKMEPEHACKKVSRNTFMHYLTPSQEKPQEESSKSSVPSESSQSEVLCTKETILQVIDEVDPEMPYLEAFPTDTDVWDENWVFSDGAGGSNTTPTIPKVETQKQENKISKEQKQPFKFCMDSGDASVVHRPLEEFYISLIKSSKSQESTDIQQSSHTEEQHLAEKSHRCTAEQLQGGSSSSMLCEKKLYYENKDLTYCQQQSKCSFSPLIGFQKLQIPRSATPAALGPAARLATAGRLLYWASDSH

Annotated regions:
phrase: PATVKSDLRDLLSLSPLLLSELEKAFFSRFGRSFQYTRYGFYSMLEVLRSISDIVEVKQTRTGSLLVLR
type: DOMAIN
name: TDRD5_LOTUS_2
description: TDRD5, second LOTUS domain

phrase: CISVGQIYALRVPGDVWWYRVIVHSIKNSELLDVFYPDFGNVATVKKSWLRFLKNCYMK
type: DOMAIN
name: Tudor
description: Tudor domain

phrase: IMQRVQKDVRSLLIASKNGLSIQELEQDYRMMIGSQIPLRSLGYKSTMELLLDMPNVVQIHTQMDGTVNLSAV
type: DOMAIN
name: OST-HTH/LOTUS_dom
description: OST-HTH/LOTUS domain

phrase: IGVYVESIESPSQFYVRCCGKDTSEKLEDMMIEMRHCYSNECVSERYIVPDNCISVGQIYALRVPGDVWWYRVIVHSIKNSELLDVFYPDFGNVATVKKSWLRFLKNCYMKVPAQAVPSS
type: DOMAIN
name: Tudor
description: Tudor domain

phrase: VSPVLPATVKSDLRDLLSLSPLLLSELEKAFFSRFGRSFQYTRYGFYSMLEVLRSISDIVEVKQTRTGSLLVLRK
type: DOMAIN
name: OST-HTH/LOTUS_dom
description: OST-HTH/LOTUS domain

phrase: RVQKDVRSLLIASKNGLSIQELEQDYRMMIGSQIPLRSLGYKSTMELLLDMPNVVQIHTQMD
type: DOMAIN
name: OST-HTH/LOTUS_dom
description: OST-HTH/LOTUS domain

phrase: TVKSDLRDLLSLSPLLLSELEKAFFSRFGRSFQYTRYGFYSMLEVLRSISDIVEVKQTRTGSL
type: DOMAIN
name: OST-HTH/LOTUS_dom
description: OST-HTH/LOTUS domain

phrase: DLRSDIKHVVNQHSNGLNISLLPTAFKSFTGKDLPFKELGFMSVMELVGSLGDILCLESTDEGK
type: DOMAIN
name: OST-HTH/LOTUS_dom
description: OST-HTH/LOTUS domain

phrase: VSDDLRSDIKHVVNQHSNGLNISLLPTAFKSFTGKDLPFKELGFMSVMELVGSLGDILCLESTDEGKDWKLFGA
type: DOMAIN
name: OST-HTH/LOTUS_dom
description: OST-HTH/LOTUS domain
Protein sequence:
MKIQLVRWHCSRNALWNRAFYSTRKATKNASSATPATMTSMVSQRQDLFMTDPLSPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTLWEKSGHWENYADDMFKVETTDEEKEEYGLKPMNCPGHCLIFGKKDRSYNELPLRFSDFSPLHRNEASGALSGLTRLRKFHQDDGHIFCTPSQVKSEIFNSLKLIDIVYNKIFPFVKGGSGAESNYFINFSTRPDHFIGDLKVWNHAEQVLKEILEESGKPWKLNPGDGAFYGPKLDIMVTDHLRKTHQVATIQLDFQLPERFDLKFKDQDNSYKRPIMIHRATFGSIERFMALLIDSNEGRWPFWLNPYQAVIIPVNTKNVQQLDMCTALQKKLRNELEADDMEPVPLNDWHFNVDLDIRNEPVGYRIKSAILKNYSYLIIVGDEEVQLQKYNIRERDNRKSFEKLTMSQIWEKFIELEKNYK

Annotated regions:
phrase: KIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTLWEKSGHWENYADDMFKVETTDEEKEEYGLKPMNCPGHCLIFGKKDRSYNELPLRFSDFSPLHRNEASGALSGLTRLRKFHQDDGHIFCTPSQVKSEIFNSLKLIDIVYNKIFPFVKGGSGAESNYFINFSTRPDHFIGDLKVWNHAEQVLKEILEESGKPWKLNPGDGAFYGPKLDIMVTDHLRKTHQVATIQLDFQLPERFDLKFKDQDNSYKRPIMIHRATFGSIERFMALLIDSNEGRW
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: FKVETTDEEKEEYGLKPMNCPGHCLIFGKKDRSYNELPLRFSDFSPLHRNEASGALSGLTRLRKFHQDDGHIFCTPSQVKSEIFNSLKLIDIVYNKIFPFVKGGSGAESNYFINFSTRPDHFIGDLKVWNHAEQVLKEILEESGKPWKLNPGDGAFYGPKLDIMVTDHLRKTHQVATIQLDFQLPERFDLKFKDQDNSYKRPIMIHRATFGSIERFMALLIDS
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: PYQAVIIPVNTKNVQQLDMCTALQKKLRNELEADDMEPVPLNDWHFNVDLDIRNEPVGYRIKSAILKNYSYLIIVGDEEVQLQKYNIRERDNRKSFEKLTMSQIWEKFIELE
type: DOMAIN
name: ThrRS_anticodon
description: Threonine-tRNA ligase, class IIa, anticodon-binding domain

phrase: QAVIIPVNTKNVQQLDMCTALQKKLRNELEADDMEPVPLNDWHFNVDLDIRNEPVGYRIKSAILKNYSYLIIVGDEEVQLQKYNIRERDNRKSFEKLTMSQIWEKFI
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: QRQDLFMTDPLSPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTLWEKSGHWENYADDMFKVETTDEEKEEYGLKPMNCPGHCLIFGKKDRSYNELPLRFSDFSPLHRNEASGALSGLTRLRKFHQDDGHIFCTPSQVKSEIFNSLKLIDIVYNKIFPFVKGGSGAESNYFINFSTRPDHFIGDLKVWNHAEQVLKEILEESGKPWKLNPGDGAFYGPKLDIMVTDHLRKTHQVATIQLDFQLPERFDLKFKDQDNSYKRPIMIHRATFGSIERFMALLIDSNEGRWPFWLN
type: DOMAIN
name: ThrRS_core
description: Threonine-tRNA ligase catalytic core domain
Protein sequence:
MNRLPSSASALACSAHALNLIEKRTLDHEEMKALNREVIEYFKEHVNPGFLEYRKSVTAGGDYGAVEWQAGGLNTLVDTQGEEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALNECKKTGDDVAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNEIGYNFASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCELVIKAARKALAAMRVSVEEA

Annotated regions:
phrase: MILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGG
type: CONSERVED_SITE
name: Aminotrans_3_PPA_site
description: Aminotransferases class-III pyridoxal-phosphate attachment site
Protein sequence:
MDRYCVFGNPIGHSKSPLIHRLFAEQTGQVLTYEARLAPLDDFIGDARAFFAEGLGANVTVPFKEEAFRLADELSERARRAGAVNTLKKLEGGRLLGDNTDGAGLTRDLQDNAGFALTGKRILVLGAGGAVRGVLEPFLAQKPAVLVIANRTVAKAEQLVREFADLGPLVAAGFDWLDAPVDLIVNGTSASLGGELPPIAPSLIQPGHTLCYDMMYGKEPTAFNRWAFDQGAARCLDGLGMLVEQAAEAFELWRGVRPNTAPVLAELRRQLAG

Annotated regions:
phrase: VFGNPIGHSKSPLIHRLFAEQTGQVLTYEARLAPLDDFIGDARAFFAEGLGANVTVPFKEEAFRLADELSERARRAGAVNT
type: DOMAIN
name: Shikimate_DH-bd_N
description: Shikimate dehydrogenase substrate binding, N-terminal

phrase: GLGMLVEQAAEAFELWRGVRPNTAPVLAEL
type: DOMAIN
name: SDH_C
description: SDH, C-terminal

phrase: ALTGKRILVLGAGGAVRGVLEPFLAQKPAVLVIANRTVAKAEQLVREFA
type: DOMAIN
name: Shikm_DH/Glu-tRNA_Rdtase
description: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase
Protein sequence:
MGIKHLFQVIQENAPDAIKAGDIKNHFGRKVAIDASMSIYSFLIAVRSEGQQLMSESGETTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRTARKAEATEAHEEAKETGTAEDVEKFSRRTVRVTREHNAECKKLLKLMGIPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLCFEAPILLRHLTFSEQRKEPIQEIHLNRTLEGLGMDRKQFIDLCILLGCDYLEPIPKVGPNTALKLIREHGSLEKVVEAIENDPKKKYVIPEDWPYQDARELFLHPDVREADHPECDFKWEAPDVEALVEFLVKDKGFNEDRVRNGAARLQKNLKTAQQSRLEGFFKPVARTDEEKASLKRKHDEKLQEQKKRKKEEAKAKKEAKAKPRGAA

Annotated regions:
phrase: IKPLYVFDGAPPKL
type: CONSERVED_SITE
name: XPG_CS
description: XPG conserved site

phrase: RKQFIDLCILLGCDYLEPIPKVGPNTALKLIRE
type: CONSERVED_SITE
name: HhH2
description: Helix-hairpin-helix motif, class 2

phrase: MGIKHLFQVIQENAPDAIKAGDIKNHFGRKVAIDASMSIYSFLIAVRSEGQQLMSESGETTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRTARKAE
type: DOMAIN
name: XPG_DNA_repair_N
description: XPG, N-terminal

phrase: GIPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLCFEAPILLRHLTFSEQRKEPIQEIHLNRTLEGLGMDRKQFIDLCILLGC
type: DOMAIN
name: XPG-I_dom
description: XPG-I domain

phrase: KLMGIPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLCFEAPILLRHLTFSEQRKEPIQEIHLNRTLEGLG
type: DOMAIN
name: XPG-I_dom
description: XPG-I domain

phrase: GIPYIDAPTEAEAQ
type: CONSERVED_SITE
name: XPG_CS
description: XPG conserved site

phrase: MGIKHLFQVIQENAPDAIKAGDIKNHFGRKVAIDASMSIYSFLIAVRSEGQQLMSESGETTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRTARKAE
type: DOMAIN
name: XPG_DNA_repair_N
description: XPG, N-terminal
Protein sequence:
MEADVQRAQQAQLEKGSSVPPWTGIPLQKGLGQRLRQHVNPLQAQYQQPTPPPHWERVYRRLGQPLHLDIGSGSGRFLLRMAQEQPDWNFLGVEIRQPLVERANAWRDELGLDNVHFLFANINVSLRHLFAPGDLSRVTIQFPDPWFKKRHHKRRIVQPRLVADLALLLQPGSPVFLQSDVREVAEEMVDRFLEHPQFWNPYQGPIDDNPFGIPTEREWQCLQLGLPIYRYWLERR

Annotated regions:
Protein sequence:
MATIKDVAKRAGVSTTTVSHVINKTRFVAENTRAAVWAAIKELNYSPSAVARSLKVNHTKSIGLLATSSEAPYFAEVIEAVENSCYSKGYTLILCNSHNNLDKQKAYLAMLAQKRVDGLLVMCSEYPDHLLSLLEGYRNIPMVVMDWGKARGDFTDTIIDNAFHGGYIAGRYLIERGHRDIGIIPGPLERNTGGGRLQGFLKAMEEAKITVKEEWIVQGDFEPESGYKAMTQMLNQKQRPTAVFCGGDVMAMGAICAADELGLRVPADISIVGYDNIRNARYFTPALTTVHQPKERLGQMAFSMLLDRIVNKREDAQTIEVHPRLVERRSVADGPFIDYRR

Annotated regions:
phrase: KDVAKRAGVSTTTVSHVINKTRFVAENTRAAVWAAIKELNYSPSAVARSL
type: DOMAIN
name: HTH_LacI
description: LacI-type HTH domain

phrase: RYLIERGHRDIGIIPGPLERNTGGGRLQGFLKAMEEAKITVKEEWIVQGDFEPESGYKAMTQMLNQKQRPTAVFCGGDVMAMGAICAADELGLRVPADISIVGYDNIRNARYFTPALTTVHQPKERLGQMAFSMLLDRIVNKREDAQTIEVHPRLVERRS
type: DOMAIN
name: LacI/GalR-like_sensor
description: Transcriptional regulator LacI/GalR-like, sensor domain

phrase: MATIKDVAKRAGVSTTTVSHVINKTRFVAENTRAAVWAAIKELNYSPSAVARSLKVNHTKSIGLLATSSE
type: DOMAIN
name: HTH_LacI
description: LacI-type HTH domain

phrase: TIKDVAKRAGVSTTTVSHVINKTRFVAENTRAAVWAAIKELNYSP
type: DOMAIN
name: HTH_LacI
description: LacI-type HTH domain

phrase: ATIKDVAKRAGVSTTTVSHVINKTRFVAENTRAAVWAAIKELNYSPSAVARSLK
type: DOMAIN
name: HTH_LacI
description: LacI-type HTH domain

phrase: TIKDVAKRAG
type: DOMAIN
name: HTH_LacI
description: LacI-type HTH domain

phrase: VSTTTVSHVI
type: DOMAIN
name: HTH_LacI
description: LacI-type HTH domain
Protein sequence:
MPLVTRNIEPRHLCRQTLPSDTSELECRTNITLANVIRQLGSLSKYAEDIFGEICTQASAFASRVNSLAERVDRVQVKVTQLDPKEEEVSLQGINTRKAFRSSTTQDQKLFDRNSLPVPVLETYNSCDAPPPLNNLSPYRDDGKEALKFYTNPSYFFDLWKEKMLQDTKDIMKEKRKHRKEKKDNPNRGNVNPRKIKTRKEEWEKMKMGQEFVESKERLGPSGYSSTLVYQNGSIGSVENVDAASYPPPPQSDSASSPSPSFSEDNLPPPPAEFSYPADNQRGSVLAGPKRTSMVSPSHPPPAPPLSSPPGPKPGFAPPPAPPPPPPMSVPPPLPSMGFGSPGTPPPPSPPSFPPHPDFAAPPPPPPPPAADYPMPPPPLSQPSGGAPPPPPPPPPPGPPPLPFSGADGQPAAPPPPPPSEATKPKSSLPAVSDARSDLLSAIRQGFQLRRVEEQREQEKRDVVGNDVATILSRRIAVEYSDSEDDSSEFDEDDWSD

Annotated regions:
phrase: ARSDLLSAIRQGFQLRR
type: DOMAIN
name: WH2_dom
description: WH2 domain

phrase: ARSDLLSAIRQGFQLRR
type: DOMAIN
name: WH2_dom
description: WH2 domain

phrase: SDARSDLLSAIRQGFQLRRVEEQRE
type: DOMAIN
name: WH2_dom
description: WH2 domain
Protein sequence:
MEIQQTHRKINRPLVSLALVGALVSITPQQSHAAFFTTVIIPAIVGGIATGAAVGTVSGLLGWGLKQAEEANKTPDKPDKVWRIQAGKGFNEFPNKEYDLYKSLLSSKIDGGWDWGNAARHYWVKDGQWNKLEVDMQNAVGTYNLSGLINFTGGDLDVNMQKATLRLGQFNGNSFTSYKDSADRTTRVDFNAKNILIDNFLEINNRVGSGAGRKASSTVLTLQASEGITSRENAEISLYDGATLNLASNSVKLMGNVWMGRLQYVGAYLAPSYSTINTSKVTGEVNFNHLTVGDHNAAQAGIIASNKTHIGTLDLWQSAGLNIIAPPEGGYKDKPNDKPSNTTQNNAKNDKQESSQNNSNTQVINPPNSAQKTEIQPTQVIDGPFAGGKNTVVNINRINTNADGTIRVGGFKASLTTNAAHLHIGKGGINLSNQASGRSLLVENLTGNITVDGPLRVNNQVGGYALAGSSANFEFKAGTDTKNGTATFNNDISLGRFVNLKVDAHTANFKGIDTGNGGFNTLDFSGVTNKVNINKLITASTNVAVKNFNINELVVKTNGVSVGEYTHFSEDIGSQSRINTVRLETGTRSIYSGGVKFKGGEKLVINDFYYAPWNYFDARNIKNVEITNKLAFGPQGSPWGTAKLMFNNLTLGQNAVMDYSQFSNLTIQGDFVNNQGTINYLVRGGQVATLNVGNAAAMFFSNNVDSATGFYQPLMKINSAQDLIKNKEHVLLKAKIIGYGNVSAGTDSIANVNLIEQFKERLALYNNNNRMDICVVRNTDDIKACGTAIGNQSMVNNPENYKYLEGKAWKNIGISKTANGSKISVHYLGNSTPTENGGNTTNLPTNTTNKVRFASYALIKNAPFARYSATPNLVAINQHDFGTIESVFELANRSNDIDTLYANSGAQGRDLLQTLLIDSHDAGYARTMIDATSANEITKQLNTATTTLNNIASLEHKTSGLQTLSLSNAMILNSRLVNLSRRHTNHIDSFAKRLQALKDQRFASLESAAEVLYQFAPKYEKPTNVWANAIGGTSLNSGGNASLYGTSAGVDAYLNGEVEAIVGGFGSYGYSSFSNQANSLNSGANNTNFGVYSRIFANQHEFDFEAQGALGSDQSSLNFKSALLRDLNQSYNYLAYSAATRASYGYDFAFFRNALVLKPSVGVSYNHLGSTNFKSNSNQKVALKNGASSQHLFNASANVEARYYYGDTSYFYMNAGVLQEFANFGSSNAVSLNTFKVNATRNPLNTHARVMMGGELKLAKEVFLNLGFVYLHNLISNIGHFASNLGMRYSF

Annotated regions:
phrase: FELANRSNDIDTLYANSGAQGRDLLQTLLIDSHDAGYARTMIDATSANEITKQLNTATTTLNNIASLEHKTSGLQTLSLSNAMILNSRLVNLSRRHTNHIDSFAKRLQALKDQRFASLESAAEVLYQFAPKYEKPTNVWANAIGGTSLNSGGNASLYGTSAGVDAYLNGEVEAIVGGFGSYGYSSFSNQANSLNSGANNTNFGVYSRIFANQHEFDFEAQGALGSDQSSLNFKSALLRDLNQSYNYLAYSAATRASYGYDFAFFRNALVLKPSVGVSYNHLGSTNFKSNSNQKVALKNGASSQHLFNASANVEARYYYGDTSYFYMNAGVLQEFANFGSSNAVSLNTFKVNATRNPLNTHARVMMGGELKLAKEVFLNLGFVYLHNLISNIGHFASNLGMRYS
type: DOMAIN
name: OM_autotransptr_brl_dom
description: Outer membrane autotransporter barrel domain

phrase: PTNVWANAIGGTSLNSGGNASLYGTSAGVDAYLNGEVEAIVGGFGSYGYSSFSNQANSLNSGANNTNFGVYSRIFANQHEFDFEAQGALGSDQSSLNFKSALLRDLNQSYNYLAYSAATRASYGYDFAFFRNALVLKPSVGVSYNHLGSTNFKSNSNQKVALKNGASSQHLFNASANVEARYYYGDTSYFYMNAGVLQEFANFGSSNAVSLNTFKVNATRNPLNTHARVMMGGELKLAKEVFLNLGFVYLHNLISNI
type: DOMAIN
name: Autotransporte_beta
description: Autotransporter beta-domain

phrase: KYEKPTNVWANAIGGTSLNSGGNASLYGTSAGVDAYLNGEVEAIVGGFGSYGYSSFSNQANSLNSGANNTNFGVYSRIFANQHEFDFEAQGALGSDQSSLNFKSALLRDLNQSYNYLAYSAATRASYGYDFAFFRNALVLKPSVGVSYNHLGSTNFKSNSNQKVALKNGASSQHLFNASANVEARYYYGDTSYFYMNAGVLQEFANFGSSNAVSLNTFKVNATRNPLNTHARVMMGGELKLAKEVFLNLGFVYLHNLISNIGHFASNLGMRYS
type: DOMAIN
name: Autotransporte_beta
description: Autotransporter beta-domain
Protein sequence:
MVAIKRLATVDADFKAQMDALLAFEAAQDEGIERTVIGILADVKARGDAAVVEYSNKFDRLTASSMADLELSKAEMQKALDGLPADQRQALEAAAHRVRVYHEKQRMEGWSYTEADGTMLGQMITPLDRVGLYVPGGKAAYPSSVLMNAIPAKVAGVKELIMVVPTPGGEHNQLVLAAACLAGVDRVFTIGGAQAVGALAYGTEAVPQVDKIVGPGNAYVACAKRRVFGIVGIDMIAGPSEILVVADGSSDPDWVAMDLFSQAEHDELAQSILICTDAAYIDRVQASIEKLLPTMPRREVIETSLTNRGALILVRDLEEACAIANRVAPEHLELSLADPDPWVAKIHHAGAIFIGHYTSESLGDYCAGPNHVLPTSGSARFSSPLGVYDFQKRTSLIKVSKAGAQTLGKIASTLAHGEGLPAHAKSAEFRLEN

Annotated regions:
phrase: IDMIAGPSEILVVADGSSDPDWVAMDLFSQAE
type: CONSERVED_SITE
name: Histidinol_DH_CS
description: Histidinol dehydrogenase, conserved site
Protein sequence:
MITLAVDCMGGDHGPRVTLAACRQFLEHHPQARLLLVGQPESLGGFAHERAQIVPASEVVSMDDPVEVALRRKKDSSMRVAVQQVKDGAAQVAVSAGNTGALMAIARYLLKTLDGIDRPAIATQMPNARGGATTVLDLGANVDCSAEHLLQFAVMGAALVSALHEGTEEPAVGLLNIGEEVIKGNEVIKRTGELLRSAAESGDLNFYGNVEGNDIFKGTVDIVVCDGFVGNVALKASEGVASMIVGALKQEFKRSIFTKIAAVVAYPVLSALMRRMDHRRYNGAALLGLRGLVFKSHGSADILAFEQALIRAYDTARNNLLDRVRSRVAHAAPLLGPAAAQPSP

Annotated regions:
Protein sequence:
MTDQNLAIVVLAAGQGTRMRSRTPKVLHRIGGRSLLQHVLDTAGTLDPDRLLVVVRHERDLIADAVQDVAPEAVVVDQDEIPGTGRAVQVALEQLTEFGGDILILSADVPLLDGETLAELVAGHRAAEAAVTLLSARVDDPTGYGRVIRSGDGGVVGIVEQRDASPEERAIAEINAGVYIFQSAPLRREIGALGDDNAQGERYLTDVVALFHTAGMTIGATLAPDPTAALGINDRVQLAAAAAELNARTVRRWQLEGVTVQDPATTWIDVTASLAPDVTVLPNTHILRATSIAEGAIVGPDTSLVDCEVGEDATVTRTDATLAVIGARATVGPFAYLRPGTNLGSRGKIGTFVETKNARIGNGSKVPHLSYLGDAEVGVGANVGAGTIIANYDGVEKHRTEVGDHVRTGAHNVFVAPVRIGDGAYTGAGTVVRKDVPPGALALTVASQRNVEGWVARNRPGTAAAQAAEKAPNGSQEEDG

Annotated regions:
phrase: VVLAAGQGTRMRSRTPKVLHRIGGRSLLQHVLDTAGTLDPDRLLVVVRHERDLIADAVQDVAPEAVVVDQDEIPGTGRAVQVALEQLTEFGGDILILSADVPLLDGETLAELVAGHRAAEAAVTLLSA
type: DOMAIN
name: MobA-like_NTP_Trfase
description: MobA-like NTP transferase

phrase: GVTVQDPATTWIDVTASLAPDVTVLPNTHILRATSIAEGAIVGPDTSLVDCEVGEDATVTRTDATLAVIGARATVGPFAYLRPGTNLGSRGKIGTFVETKNARIGNGSKVPHLSYLGDAEVGVGANVGAGTIIANYDGVEKHRTEVGDHVRTGAHNVFVAPVRIGDGAYTGAGTVVRKDVPPGALALTVAS
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain
Protein sequence:
MAAAAMRPSMGALGRISSSTPSPLRPLTQTASLSTTAALLKRHKYREARVYRDNSKHRGESAIHRSGTRWRLSMSDEPLPRPVPRNKLPAIETDPDHGLWEFFQNRTMVVNSPPEIAKHGRSWTAEELRHKSWDDLHRLWWVCAKERNRIATANWERNKSGLGFGEAEMRERDNAVRQTMRSIKHVLTERFYTWEDAVKVAEKDPEVDLTGNGPAFTPSNFLEDSDAAATEGEQQAAEATEEAVEKAEPATAATPESATIPSSQQQTDTPRL

Annotated regions:
Protein sequence:
MDVANCEIGENTKMAREMTLLGNYESAEIYYQAVMQMIQRQVHLVNDTSRKAKWNVVQKQINDENLQLKRVQIPLNKFKINPHNERAIRVRNPILEEPSKYNIINDPDVWPPPPDADLDVWPAPINAEHKPTRPIKSNLKKPLPNRKVTTPKTPAVNGKKSTVKPSFNRPTVPLKDKDTKRDSKDKNDKEKEEKETKEESEKKFEPSCILEADLVDMLERDIVQKNPNIHWDDIADLHEAKRLLEEAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKIVRLLFEMARFYAPSTIFIDEIDSLCSRRGSESEHEASRRVKSELLVQMDGISSNSEEASKVVMVLAATNFPWDIDEAMRRRLEKRIYIPLPNDEGREALLKINLREVQVDPSVDLSDISRRLKGYSGADITNVCRDASMMSMRRKISGLRPEQIRQLPKEELDLPVSTQDFLEAVNKCNKSVSKDDLKKYEEWMSKFGSS

Annotated regions:
phrase: PWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKIVRLLFEMARFYAPSTIFIDEIDSLCSRRGSESEHEASRRVKSELLVQMDGISSNSEEASKVVMVLAATNFPWDIDEAMRRRLEKRIYIPLP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: EIGENTKMAREMTLLGNYESAEIYYQAVMQMIQRQVHLVNDTSRKAKWNVVQKQINDENLQLKRV
type: DOMAIN
name: KATNA1_MIT
description: Katanin p60 ATPase-containing subunit A1, MIT domain

phrase: LPKEELDLPVSTQDFLEAVNKCNKSVSKDDLKKYEEWMSKF
type: DOMAIN
name: Spast_Vps4_C
description: Spastin/Vps4, C-terminal

phrase: IGENTKMAREMTLLGNYESAEIYYQAVMQMIQRQVHLVNDTSRKAKWNVVQKQINDENLQLKR
type: DOMAIN
name: KATNA1_MIT
description: Katanin p60 ATPase-containing subunit A1, MIT domain

phrase: SVDLSDISRRLKGYSGADITNVCRDASMMSMRRKISGLRPE
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: DIADLHEAKRLLEEAVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKIVRLLFEMARFYAPSTIFIDEIDSLCSRRGSESEHEASRRVKSELLVQMDGISSNSEEASKVVMVLAATNFPWDIDEAMRRRLEKRIY
type: DOMAIN
name: KTNA1_AAA_dom
description: Katanin p60 ATPase-containing subunit A1, AAA domain

phrase: VLMVGPPGTGKTMLAKAVATECGTTFFNVSSSTLTSKYRGESEKIVRLLFEMARFYAPSTIFIDEIDSLCSRRGSESEHEASRRVKSELLVQMDGISSNSEEASKVVMVLAATNFPWDIDEAMRRRLEKRIYIP
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core