nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MKFIVKLYPEIMMKSKPVRMRFTKMLETNIRNVLKKVDEDAKVQRQWDRIMVMVPKHKPELAQAFGERLACIPGIAHVVQVDEYSFESVDDIYQQALPVYRDQIAGKTFCVRVKRTGDHDFNSIDVERYVGGGLNQFTDAIGVRLKNPDVTVNLEIDRDKLYMVTKRIEGLGGFPMATQEDVLSLISGGFDSGVSSYQFIKKGARTHYCFFNLGGAQHEIGVKQVAYHLWKTYGESHKVKFVSVPFEPVVAEILEKIDNGQMGVVLKRMMMRTAARIAERLGIQALVTGESLGQVSSQTLTNLNVIDRCTELLILRPLIAMDKQDIINESRRIGTEDFAKSMPEYCGVISQKPTVKAVLAKVEAEEKKFSEDLIDQIVAQAVTIDIREIAEQMDTRITETETVIAIETNEVVIDIRAPEEEEHKPLNIEGVEVKRIPFFKLATQFADLDKQKTYLLYCERGVMSKLQALYLIEQGYTNVKVYRP

Annotated regions:
phrase: KFIVKLYPEIMMKSKPVRMRFTKMLETNIRNVLKKVDEDAKVQRQWDRIMVMVPKHKPELAQAFGERLACIPGIAHVVQVDEYSFESVDDIYQQALPVYRDQIAGKTFCVRVKRTGDHDFNSIDVERYVGGGLNQFTDAIGVRLKNPDVTVNLEIDRDKLYMVTKRIEGL
type: DOMAIN
name: THUMP_ThiI
description: ThiI, THUMP domain

phrase: HVVQVDEYSFESVDDIYQQALPVYRDQIAGKTFCVRVKRTGDHDFNSIDVERYVGGGLNQFTDAIGVRLKNPDVTVNLEIDRDKLYMVTK
type: DOMAIN
name: THUMP_dom
description: THUMP domain

phrase: SVDDIYQQALPVYRDQIAGKTFCVRVKRTGDHDFNSIDVERYVGGGLNQFTDAIGVRLKNPDVTVNLEIDRDKLYM
type: DOMAIN
name: THUMP_dom
description: THUMP domain

phrase: ETNEVVIDIRAPEEEEHKPLNIEGVEVKRIPFFKLATQFADLDKQKTYLLYCERGVMSKLQALYLIEQGYTNVKV
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain

phrase: QAFGERLACIPGIAHVVQVDEYSFESVDDIYQQALPVYRDQIAGKTFCVRVKRTGDHDFNSIDVERYVGGGLNQFTDAIGVRLKNPDVTVNLEIDRDKLYMVTK
type: DOMAIN
name: THUMP_dom
description: THUMP domain

phrase: YPEIMMKSKPVRMRFTKMLETNIRNVLKKVDEDAKVQRQWDRIMVMVPKHKPELAQAFGERLACIPGIA
type: DOMAIN
name: ThiI_fer
description: ThiI, ferredoxin-like domain

phrase: IETNEVVIDIRAPEEEEHKPLNIEGVEVKRIPFFKLATQFADLDKQKTYLLYCERGVMSKLQALYLIEQGYTNVKV
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain

phrase: IDIREIAEQMDTRITETETVIAIETNEVVIDIRAPEEEEHKPLNIEGVEVKRIPFFKLATQFADLDKQKTYLLYCERGVMSKLQALYLIEQGYTNVKVYR
type: DOMAIN
name: THII_Thiazole_biosynth_dom
description: ThiI, thiazole biosynthesis domain

phrase: TQEDVLSLISGGFDSGVSSYQFIKKGARTHYCFFNLGGAQHEIGVKQVAYHLWKTYGESHKVKFVSVPFEPVVAEILEKIDNGQMGVVLKRMMMRTAARIAERLGIQALVTGESLGQVSSQTLTNLNVIDRCTELLILRPLIAMDKQDIINESRRIGTEDFAKSMPEYCGVISQKPTVK
type: DOMAIN
name: ThiI_AANH
description: Thil, AANH domain

phrase: IVKLYPEIMMKSKPVRMRFTKMLETNIRNVLKKVDEDAKVQRQWDRIMVMVPKHKPELAQAFGERLACIPGIAHVVQVDEYSFESVDDIYQQALPVYRDQIAGKTFCVRVKRTGDHDFNSIDVERYVGGGLNQFTDAIGVRLKNPDVTVNLEIDRDKLYMVTKRIEGLGGFPMATQEDVLSLISGGFDSGVSSYQFIKKGARTHYCFFNLGGAQHEIGVKQVAYHLWKTYGESHKVKFVSVPFEPVVAEILEKIDNGQMGVVLKRMMMRTAARIAERLGIQALVTGESLGQVSSQTLTNLNVIDRCTELLILRPLIAMDKQDIINESRRIGTEDFAKSMPEYCGVISQKPTVKAVLAKVEAEEKKFSED
type: DOMAIN
name: ThiI_N
description: ThiI, N-terminal

phrase: TQEDVLSLISGGFDSGVSSYQFIKKGARTHYCFFNLGGAQHEIGVKQVAYHLWKTYGESHKVKFVSVPFEPVVAEILEKIDNGQMGVVLKRMMMRTAARIAERLGIQALVTGESLGQVSSQTLTNLNVIDRCTELLILRPLIAMDKQDIINESRRIGTEDFAKSMPEYCGVISQKPTVKAVLAKVEAEEKK
type: DOMAIN
name: ThiI_AANH
description: Thil, AANH domain
Protein sequence:
MDKGRCTILNSEELWAQARQLFAGGVNSPVRAAVKPFPFYVERGKGAYIYTVEGNKFIDYVLGYGPLILGHSPESVKRKIIEQLEKGWLFGTPSKLEIELAKKISSHIPSAQKIRFVNSGTEATMAAIRLARGYSKRSKILKFSGNYHGAHDYTLVEAGSAATEYNVTTSDGIPMEIMKTIEICEFNDLDCVDKKLRNEDIAAALLEPIMGNAGVILPEKGFLSGLRELTKSYNSLLIFDEVITGFRIDIGGAQSYYQIYPDITTLGKIIGGGFPIGAVAGKAEIIDNFTPAGRVFNAGTFNANPISMIAGIATIEELEKEYPYNIANKASKTLVEELERLLKIKHTINHIGSMFQVFFGIDKVRNYSDAKRANKEYYIKFHERLLKERVFIPPSQYETIFTSAAHEDDVVNDTIDKLAKVIGELS

Annotated regions:
phrase: LIFDEVITGFRIDIGGAQSYYQIYPDITTLGKIIGG
type: CONSERVED_SITE
name: Aminotrans_3_PPA_site
description: Aminotransferases class-III pyridoxal-phosphate attachment site
Protein sequence:
MAEKPAQEQEQKRAMEPAVLDDIIRRLVEFRNTRPGSGKQVHLSEGEIRQLCAVSKEIFLQQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHESASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDDRILCMHGGISPELKSLDQIRNIARPMDIPESGLVCDLLWSDPSGDVGWGMNDRGVSYTFGADKVAEFLEKHDMDLICRAHQVVEDGYEFFAERQLVTVFSAPNYCGEFDNAGAMMSIDESLMCSFQILKPSEKKSPFL

Annotated regions:
phrase: PIKICGDIHGQYSDLLRLFEYGGFPPE
type: DOMAIN
name: Ser/Thr-sp_prot-phosphatase
description: Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase

phrase: YLFLGDYVDRGKQSLETICLLLAYKIK
type: DOMAIN
name: Ser/Thr-sp_prot-phosphatase
description: Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase

phrase: LLRGNHESASINRIYGFYDECKRR
type: DOMAIN
name: Ser/Thr-sp_prot-phosphatase
description: Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase

phrase: DCFNCLPVAALIDDRILCMHGGISPE
type: DOMAIN
name: Ser/Thr-sp_prot-phosphatase
description: Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase

phrase: LDQIRNIARPMDIPESGLVCDLLWSDP
type: DOMAIN
name: Ser/Thr-sp_prot-phosphatase
description: Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase

phrase: DMDLICRAHQVVEDGYEFFA
type: DOMAIN
name: Ser/Thr-sp_prot-phosphatase
description: Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase

phrase: QLVTVFSAPNYCGEFD
type: DOMAIN
name: Ser/Thr-sp_prot-phosphatase
description: Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase

phrase: PIKICGDIHGQYSDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHESASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDDRILCMHGGISPELKSLDQIRNIARPMDIPESGLVCDLLWSDPSGDVGWGMNDRGVSYTFGADKVAEFLEKHDMDLICRAHQV
type: DOMAIN
name: Calcineurin-like_PHP_ApaH
description: Calcineurin-like phosphoesterase domain, ApaH type

phrase: LRGNH
type: DOMAIN
name: Ser/Thr-sp_prot-phosphatase
description: Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase

phrase: LSEGEIRQLCAVSKEIFLQQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHESASINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDDRILCMHGGISPELKSLDQIRNIARPMDIPESGLVCDLLWSDPSGDVGWGMNDRGVSYTFGADKVAEFLEKHDMDLICRAHQVVEDGYEFFAERQLVTVFSAPNYCGEFDNAGAMMSIDESLMCSFQILKPS
type: DOMAIN
name: Ser/Thr-sp_prot-phosphatase
description: Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase

phrase: LDDIIRRLVEFRNTRPGSGKQVHLSEGEIRQLCAVSKEIFLQQPNLLEL
type: DOMAIN
name: STPPase_N
description: Serine-threonine protein phosphatase, N-terminal
Protein sequence:
MEIAFDLSSIFTDNIQRLEKADLLKYSPKQYWAVAKSIDTLGEMSSKFHGWKRIITMYEKIIDHDEDQTVYILWDKVDGNKSVLKGILRVGYKTLYLTDNEQNQYMEKAMCILDFFIVPTEQRSGNGFNMFDAMLKAENVLVEQCAFDKPSAALRQFLEKYYDQKEPVMQSNKYAVFPNFFIGRHPTVPFTPRQTKRASRASSAVSSHTTSRNTSPIGRNRPRHDSVADLMRQDNFPRGRSVIDPNSPAGFKLTRDQRHEPIW

Annotated regions:
phrase: SIFTDNIQRLEKADLLKYSPKQYWAVAKSIDTLGEMSSKFHGWKRIITMYEKIIDHDEDQTVYILWDKVDGNKSVLKGILRVGYKTLYLTDNEQNQYMEKAMCILDFFIVPTEQRSGNGFNMFDAMLKAENVLVEQCAFDKPSAALRQFLEKYYDQKEPVMQSNKYAVFPNF
type: DOMAIN
name: GNAT_ATAT
description: Gcn5-related N-acetyltransferase (GNAT) domain, ATAT-type

phrase: MEIAFDLSSIFTDNIQRLEKADLLKYSPKQYWAVAKSIDTLGEMSSKFHGWKRIITMYEKIIDHDEDQTVYILWDKVDGNKSVLKGILRVGYKTLYLTDNEQNQYMEKAMCILDFFIVPTEQRSGNGFNMFDAMLKAENVLVEQCAFDKPSAALRQFLEKYYDQKEPVMQSNKYAVFPNF
type: DOMAIN
name: GNAT_ATAT
description: Gcn5-related N-acetyltransferase (GNAT) domain, ATAT-type

phrase: AFDLSSIFTDNIQRLEKADLLKYSPKQYWAVAKSIDTLGEMSSKFHGWKRIITMYEKIIDHDEDQTVYILWDKVDGNKSVLKGILRVGYKTLYLTDNEQNQYMEKAMCILDFFIVPTEQRSGNGFNMFDAMLKAENVLVEQCAFDKPSAALRQFLEKYYDQKEPVMQSNKYAVFPNFFIGRHPTVPFTPR
type: DOMAIN
name: GNAT_ATAT
description: Gcn5-related N-acetyltransferase (GNAT) domain, ATAT-type
Protein sequence:
MEFWQNIYSHFNPVAFNLGSIAVHWYGIMYALALLSAIFVAKWFIKHDKLAISNDLFDSYIWWAEIGVILGARLGYVLFYDSHTMYYITHPWQIFNPYINGVYAGISGMSYHGAFFGFIIASYLFCRKNKVSFWFITDIAVLGVSAAYIFGRLGNFFNQELIGRVTDVPWGIYVGGVLRHPSQIYEAILEGLFVFLILAFYRKRKTFDGQLALMYGILYAIARIIAEFFRQPDSQLGFLVGEWLTMGILQSLIILIICVGFYVVRRKIIIKN

Annotated regions:
Protein sequence:
MKLHDLLQHLHLLVPYQGTDPEITSIENDNRKVQKGSLFICIKGYTVDGHDYAESAVNNGAAAVLAERALALSVPVIIVKDATRAMAVLADAFYNHPTKKLHLIGITGTNGKTTTSHLIEKIFSDVNRSTGLIGTMYTKIGSQKIETKNTTPESLILQKGFQQMLDAGVDTAIMEVSSHALHLGRVHGCDYDIAVFTNLTQDHLDYHKTMDDYRHAKSLLFSQLGNSFDVNKPKFAILNADDSASEMYRKSTAAHVVTYGIDNEADFHARNIKMTSAGTSFEIVLKEKSYPINIQLIGKFSVYNVLASIAAAFVSNISMEVIIESIESVKGVDGRFELVNAGQEFTVIVDYAHTPDSLENVLKTIRSFAKKRVFVIVGCGGDRDKTKRPLMAEIACRYGTDPIFTSDNPRSEDPIAILGDMENGATGENYITIPDRKEAIVNAINQAAEGDVILIAGKGHETYQIIGSNVYDFDDRVVAREAIEER

Annotated regions:
phrase: ITGTNGKTTTSHLIEKIFSDVNRSTGLIGTMYTKIGSQKIETKNTTPESLILQKGFQQMLDAGVDTAIMEVSSHALHLGRVHGCDYDIAVFTNLTQDHLDYHKTMDDYRHAKSLLFSQLGNSFDVNKPKFAILNADDSASEMYRKSTAAHVVTYGIDNEADFHARNIKMTSAGTSFEIVLKEKSYPINIQLIGKFSVYNVLASIAA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRFELVNAGQEFTVIVDYAHTPDSLENVLKTIRSFAKKRVFVIVGCGGDRDKTKRPLMAEIACRYGTDPIFTSDNPRSEDPIAILGDMENGATGENYITIPDRKEAIVNAINQAAEGDVILIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: EITSIENDNRKVQKGSLFICIKGYTVDGHDYAESAVNNGAAAVLAERALALSVPVIIVKDATRAMAVLADAF
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain
Protein sequence:
MLEIVYQDEYFVAVNKPAGMLVHRSWLDKHETQFVMQTLRDQIGQHVFPLHRLDRPTSGVLVFALSSEVASQVMPMFAGQEMSKTYHAIVRGWIEEEGELDYALKVELDKIADKFASQEKEAQDAITLYKPLAKVEVPYSTSKFPTTRYGLMELKPKTGRKHQLRRHMAHLRHPIVGDTTHGDGKHNKLFREEFDAPRLLLHASELRFVHPYTQQEVVIRAEVDKVWQQLFERFEWPSTLLTASH

Annotated regions:
phrase: FVAVNKPAGMLVHRSWLDKHETQFVMQTLRDQIGQHVFPLHRLDRPTSGVLVFALSSEVASQVMPMFAGQEMSKTYHAIVRGWIEEEGELDYALKVELDKIADKFASQEKEAQDAITLYKPLAKVEVPYSTSKFPTTRYGLMELKPKTGRKHQLRRHMA
type: DOMAIN
name: PsdUridine_synth_RsuA/RluA
description: Pseudouridine synthase, RsuA/RluA-like

phrase: LHRLDRPTSGVLVF
type: CONSERVED_SITE
name: PsdUridine_synth_RluA-like_CS
description: Pseudouridine synthase, RluA-like, conserved site
Protein sequence:
MKGFIFAGVLVSALICLAEGKPFDNLELVEDDMLMTKEQKEAYLAHQNGRVRRAALRDRYLWPQGKIPYTFSDDIDQAGRELAERAMNHWMSRTCLRFSPRRREHAYIEFQYDGRCRARVGYTGEARQKVSIGSALDPCPLGSVIHELGHGIGFFHEHSRPDRDEYVNINVNNMREGAESNFRKDNGYFVDSRGQDYDYGSIMHYSKYQGNNAFNAVVMEPIQRGAEIGQRDGLSAGDIRQTNLMYKCNAQGDSELQPVNDEDEDKDGGDSKKKPDPKGPKPGEIEE

Annotated regions:
phrase: RAALRDRYLWPQGKIPYTFSDDIDQAGRELAERAMNHWMSRTCLRFSPRRREHAYIEFQYDGRCRARVGYTGEARQKVSIGSALDPCPLGSVIHELGHGIGFFHEHSRPDRDEYVNINVNNMREGAESNFRKDNGYFVDSRGQDYDYGSIMHYSKYQGNNAFNAVVMEPIQRGAEIGQRDGLSAGDIRQTNLMYKC
type: DOMAIN
name: Peptidase_M12A
description: Peptidase M12A

phrase: WPQGKIPYTFSDDIDQAGRELAERAMNHWMSRTCLRFSPRRREHAYIEFQYDGRCRARVGYTGEARQKVSIGSALDPCPLGSVIHELGHGIGFFHEHSRPDRDEYVNINVNNMREGAESNFRKDNGYFVDSRGQDYDYGSIMHYSKYQGNNAFNAVVMEPIQRGAEIGQRDGLSAGDIRQTNLMYKC
type: DOMAIN
name: Peptidase_M12A
description: Peptidase M12A

phrase: DRYLWPQGKIPYTFSDDIDQAGRELAERAMNHWMSRTCLRFSPRRREHAYIEFQYDGRCRARVGYTGEARQKVSIGSALDPCPLGSVIHELGHGIGFFHEHSRPDRDEYVNINVNNMREGAESNFRKDNGYFVDSRGQDYDYG
type: DOMAIN
name: Peptidase_Metallo
description: Peptidase, metallopeptidase

phrase: GKIPYTFSDDIDQAGRELAERAMNHWMSRTCLRFSPRRREHAYIEFQYDGRCRARVGYTGEARQKVSIGSALDPCPLGSVIHELGHGIGFFHEHSRPDRDEYVNINVNNMREGAESNFRKDNGYFVDSRGQDYDYGSIMHYSKYQGNNAFNAVVMEPIQRGAEIGQRDGLSAGDIRQTNLM
type: DOMAIN
name: Astacin-like_dom
description: Astacin-like metallopeptidase domain

phrase: AERAMNHWMSRTCLRFSP
type: DOMAIN
name: Peptidase_M12A
description: Peptidase M12A

phrase: PCPLGSVIHELGHGIGFF
type: DOMAIN
name: Peptidase_M12A
description: Peptidase M12A

phrase: EHSRPDRDEYVNINVNN
type: DOMAIN
name: Peptidase_M12A
description: Peptidase M12A

phrase: DYDYGSIMHYSKYQG
type: DOMAIN
name: Peptidase_M12A
description: Peptidase M12A

phrase: LSAGDIRQTNLMY
type: DOMAIN
name: Peptidase_M12A
description: Peptidase M12A
Protein sequence:
MYSTTDFRKGLKIELDGTPFEIVDFQHFKPGKGGAMVRTKLRNILNGRVVDNTFRSGEKVGRPDLESRDMQYLYHEGDDLVLMDLTTYEQLYMHEDLTDGKAGFLKDGQQVRVLLYNGKPLDLELPVSLVLEVVETEPGAKGDTVSNVTKPAKLETGIVVQVPIFVNQGDRIKVDTRSREYLGRE

Annotated regions:
phrase: SRDMQYLYHEGDDLVLMDLTTYEQLYMHEDLTDGKAGFLKDGQQVRVLLYNGKP
type: DOMAIN
name: Transl_elong_P/YeiP_cen
description: Translation elongation factor P/YeiP, central

phrase: RDMQYLYHEGDDLVLMDLTTYEQLYMHEDLTDGKAGFLKDGQQVRVLLYNGKP
type: DOMAIN
name: Transl_elong_P/YeiP_cen
description: Translation elongation factor P/YeiP, central

phrase: LVLEVVETEPGAKGDTVSNVTKPAKLETGIVVQVPIFVNQGDRIKVDTRSREYLG
type: DOMAIN
name: Elong-fact-P_C
description: Elongation factor P, C-terminal

phrase: LVLEVVETEPGAKGDTVSNVTKPAKLETGIVVQVPIFVNQGDRIKVDTRSREYLG
type: DOMAIN
name: Elong-fact-P_C
description: Elongation factor P, C-terminal

phrase: ESRDMQYLYHEGDDLVLMDLTTYEQLYMHEDLTDGKAGFLKDGQQVRVLLYNGKPLDLEL
type: DOMAIN
name: Transl_elong_P/YeiP_cen
description: Translation elongation factor P/YeiP, central

phrase: STTDFRKGLKIELDGTPFEIVDFQHFKPGKGGAMVRTKLRNILNGRVVDNTFRSGEK
type: DOMAIN
name: Transl_elong_KOW-like
description: Translation elongation factor, KOW-like

phrase: KPAKLETGIVVQVPIFVNQ
type: CONSERVED_SITE
name: Transl_elong_P/YeiP_CS
description: Translation elongation factor P/YeiP, conserved site

phrase: VLEVVETEPGAKGDTVSNVTKPAKLETGIVVQVPIFVNQGDRIKVDTRSREYLG
type: DOMAIN
name: Elong-fact-P_C
description: Elongation factor P, C-terminal
Protein sequence:
MHCARYSTGTCRSCQWLEKPYPQQLSDKQQHLEDLLQPHAVQRWLPVQPSAQTAFRNKAKMVVSGSVERPLLGMLHRDGTAVDLCDCPLYPTSFAPVFDVLKVFIARAGLTPYNVARRRGELKYLLLTESTQRGTFMLRFVLRSETKLAQLRAAMPWLQQQLPQLEVISANIQPVHQAIMEGKTEIILSDAAALAEQFNQVPLYIRPQSFFQTNPQVAAALYATARDWVAELKITSMWDLFCGVGGFGLHCASSEMRLTGIEISAEAIACARRSAEQLGLKHVEFQALDSTQFATAKAEIPDLVLVNPPRRGIGSELCSYLSRMAPDYILYSSCNAESMAKDMTELANYRALRVQLFDMFPHTAHYEVLTLLKRA

Annotated regions:
phrase: FDMFPHTAHY
type: CONSERVED_SITE
name: MeTrfase_TrmA_CS
description: RNA methyltransferase TrmA, conserved site

phrase: NPPRRGIGSELCSYLSRMAPDYILYSSCNAE
type: ACTIVE_SITE
name: MeTrfase_TrmA_AS
description: RNA methyltransferase TrmA, active site
Protein sequence:
MRVTGITRNCQQWWIWGILGFWMVMICSVVGNLWVTVYYGVPVWKEAKTTLFCASDAKAYEREVHNVWATHACVPTDPDPQEMDLENVTENFNMWKNDMVDQMHEDIISLWDQSLKPCVKLTPLCVTLKCDNVTSNSSNRYNETGDGGMKNCSFNATTELRDRKRLEYALFYKLDIVLLNSSTKEYRLINCNTSAITQACPKVSFDPIPIHYCAPAGYAILKCKDRTFNGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEKKIIIRSENLTNNAKTIIVHLNKSIEIVCTRPNNNIRKSIRIGPGQSFHATGSIIGDIREAYCNISEGEWNRTLQNVSKELAEYFPGKIVFAPSSGGDLEITTHSFNCRGEFFYCNTSNLFNRPNGTESNSSSSNSSAVIRLPCRIKQIINMWQKVGRAMYAPPIAGNITCKSNITGLLLIRDGGGGQNATNETFRPGGGDMRDNWRSELYKYKVVEIKPLGVAPTEAKRRVVEREKRAVGMGAMFLGFLGVAGSTMGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQARVLAIERYLKDQQLLGMWGCSGKLICTTAVPWNTSWSNKSQEEIWSNMTWMQWDREVSNYTNIIYNLLEESQIQQEKNEKDLLALDSWKNLWTWFDITNWLWYIKIFIMIVGGLIGLRIIFAVLSVVNRVRQGYSPLSFQTLTPSPRGPDRLGRIEEEGGEQDRDRSTRLVSGFLALAWDDLRSLCLFLYHRLRDLILVTT

Annotated regions:
phrase: VQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQARVLAIERYLKDQQLLGMWGCSGKLICTTAVPWNTSWSNKSQEEIWSNMTWMQWDREVSNYTNIIYNLLEESQIQQEKNEKDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: TGDGGMKNCSFNATTELRDRKRLEYALFYKLDIVLLNSSTKEYRLINCNTSAITQACPKVSFDPIPIHYCAPAGYAILKCKDRTFNGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEKKIIIRSENLTNNAKTIIVHLNKSIEIVCTRPNNNIRKSIRIGPGQSFHATGSIIGDIREAYCNISEGEWNRTLQNVSKELAEYFPGKIVFAPSSGGDLEITTHSFNCRGEFFYCNTSNLFNRPNGTESNSSSSNSSAVIRLPCRIKQIINMWQKVGRAMYAPPIAGNITCKSNITGLLLIRDGGGGQNATNETFRPGGGDMRDNWRSELYKYKVVEIKPLGVAPTEAKRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: LWVTVYYGVPVWKEAKTTLFCASDAKAYEREVHNVWATHACVPTDPDPQEMDLENVTENFNMWKNDMVDQMHEDIISLWDQSLKPCVKLTPLCVTLKCDNVTSNSS
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: MGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQARVLAIERYLKDQQLLGMWGCSGKLICTTAVPWNTSWSNKSQEEIWSNMTWMQWDREVSNYTNIIYNLLEESQIQQEKNEKDLLALDSWKNLWTWFDITNWLWYIKIFIMIVGGLIGLRIIFAVLSVVNRVRQGYSPLSFQT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MNALVNLLDLDADALTAYCGELGEKPFRARQLQRWIHHYGASRFDAMSDLAKSLREKLATRAEIRAPAAITDHLSADGTRKWLLDVGQGNAVETVYIPEETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTGEIIGQLWMAEFAMREQLGRGPKDDRVISNVVMMGMGEPLLNYDAVVPAMRLMLDDNAYGLSRRRVTLSTSGVVPMMDRLSKDLPVALAVSLHASNDALRDVLVPLNKKYPLAELMAACRRYLEFAPRDFITFEYCMLDGVNDGVEHARELLKLVADVPCKFNLIPFNPFPESGLKRSNNDQIRRFAQVLMDAGIVTTIRKTRGDDIDAACGQLAGEVKDRTRLVERGKFGKITPLVPVAASGQPREVRPA

Annotated regions:
phrase: VNLLDLDADALTAYCGELGEKPFRARQLQRWIHHYGASRFDAMSDLAKSLREKLATRAE
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: SSQAGCAVNCRFCSTGKQGFSRNLSTGEIIGQLWMAEFAMREQLGRGPKDDRVISNVVMMGMGEPLLNYDAVVPAMRLMLDDNAYGLSRRRVTLSTSGVVPMMDRLSKDLPVALAVSLHASNDALRDVLVPLNKKYPLAELMAACRRYLEFAPRDFITFEYCMLDGVNDGVEHARE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: EETRGTLCVSSQAGCAVNCRFCSTGKQGFSRNLSTGEIIGQLWMAEFAMREQLGRGPKDDRVISNVVMMGMGEPLLNYDAVVPAMRLMLDDNAYGLSRRRVTLSTSGVVPMMDRLSKDLPVALAVSLHASNDALRDVLVPLNKKYPLAELMAACRRYLEFAPRDFITFEYCMLDGVNDGVEHARELLKLVADVPCKFNLIPFNPFPESGLKRSNNDQIRRFAQVLMDAGIVTTIRKTRGD
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MARLAAFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFATGRHALEMQHILGALSLDAYLITGNGTRVHSLEGELLHRDDLPADVAELVLYQQWDTRASMHIFNDDGWFTGKENPALLQAFVYSGFRYQIIDVKKMPLGSVTKICFCGDHDDLTRLQIQLYEALGERAHLCFSATDCLEVLPVGCNKGAVLTVLTQHLGLSLRDCMAFGDAMNDREMLGSVGSGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLDYPHLPYSPE

Annotated regions:
Protein sequence:
MAEELAGVRSGVVVSPHSDLSVDVLVLRISQQHNSSRRIDPRLSDGASEEISLVAAQAPQALPVSDVHFGGGTPTIIKPEDFLALMDLLRRSFAFRKTATIAVEIEPRTFTAEMAEALGAAEVSHVSLGVQSFDPIVQKATNRVQRKAQTTAAIENLRRIGISRINFDLMYGLPHQTVQSCVQSATAAVAMRPDRLAVFGYAHVPSYRKNQRLIDETALPDIAARAEQAVAVAETYLPNGAGAVAVLASLPLAAKSQPVL

Annotated regions:
phrase: EEISLVAAQAPQALPVSDVHFGGGTPTIIKPEDFLALMDLLRRSFAFRKTATIAVEIEPRTFTAEMAEALGAAEVSHVSLGVQSFDPIVQKATNRVQRKAQTTAAIENLRRIGISRINFDLMYGLPHQTVQ
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: DVLVLRISQQHNSSRRIDPRLSDGASEEISLVAAQAPQALPVSDVHFGGGTPTIIKPEDFLALMDLLRRSFAFRKTATIAVEIEPRTFTAEMAEALGAAEVSHVSLGVQSFDPIVQKATNRVQRKAQTTAAIENLRRIGISRINFDLMYGLPHQTVQSCVQSATAAVAMRPDRLAVFGYAHVPSYRKNQRLIDETALPDIAARAEQAV
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: AGVRSGVVVSPHSDLSVDVLVLRISQQHNSSRRIDPRLSDGASEEISLVAAQAPQALPVSDVHFGGGTPTIIKPEDFLALMDLLRRSFAFRKTATIAVEIEPRTFTAEMAEALGAAEVSHVSLGVQSFDPIVQKATNRVQRKAQTTAAIENLRRIGISRINFDLMYGLPHQTVQSCVQSATAAVAMRPDRLAVFGYAHVPSYRKNQRLIDETALPDIAARAEQAVAVAETYLP
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MPSEILLKIFSYLDAVSLLCAGCVSRRFYHLANDNFIWIRIYSTAFSPTRSNWKVNSVEKIAVSVSFLSVQDKEAGYWKKEYITKQIASVKAALADILKPVNPYTGLPVKTKEALRMFGLGWAIILKEKSGKEYIMEHVDLSVNDTSVTVIWYGKNWPCLASLSTLDLCGVTPVFMDWYKTPTKHRLRWHSLIAKYNLSHLTVSTMIGCDRLIRIFCLHPGLLVGVWKKEEELAFVMANLHFHHLVERSTLGSATIPYELPPHSPFLDDSPEYGLHGYQLHVDLHSGGVFYLCGTFRNLFTKKGNIENGHVKLIVIHLKNNREHLPLIGKVGLSWKTDILDGCIKSCSMMDVTLLDEHGKPFWCFSSPVCMRSPATPADGPSFLGQTYSVDYVDAEGRVHVELVWIRETEEYLIVNLVLYLSIAKINRWFGTEY

Annotated regions:
phrase: PSEILLKIFSYLDAVSLLCAGCVSRRFYHLANDNFIWIRI
type: DOMAIN
name: F-box_dom
description: F-box domain

phrase: MPSEILLKIFSYLDAVSLLCAGCVSRRFYHLANDNFIWIR
type: DOMAIN
name: F-box_dom
description: F-box domain

phrase: MPSEILLKIFSYLDAVSLLCAGCVSRRFYHLANDNFIWIR
type: DOMAIN
name: F-box_dom
description: F-box domain
Protein sequence:
MKEYQTITEISGPLVFVETDEPVGYDDIVEIELSDGETRRGQVLESASDYVAIQVFEGTEGIDRDASVRFLGETMKMPVTEDLLGRVMDGTGQPIDGGPEIVPDERRDIVGEAINPFSREYPEEFIQTGVSAIDGMNTLVRGQKLPIFSASGLPHNDLALQIARQATVPEEEDGEDDEGSEFAVIFGAMGITAEEANEFMDDFERTGALERSVVFMNLADDPAVERTITPRLALTTAEYLAFEKDYHVLVILTDMTNYCEALREIGAAREEVPGRRGYPGYMYTDLAQLYERAGRIEGREGSVTQLPILTMPGDDDTHPIPDLTGYITEGQIYIDRDLNSQGIQPPINVLPSLSRLMDDGIGEGLTRADHADVKDQIFAAYAEGEDLRDLVNIVGREALSELDNKYLDFADRFEEEFVDQGTDTARSIDETLELGWDLLSMLPKDALNRIDEDLIEEHYREDETAETVEA

Annotated regions:
phrase: DGIGEGLTRADHADVKDQIFAAYAEGEDLRDLVNIVGREALSELDNKYLDFADRFEEEFVDQGTDTARSIDETLELGWDLLSMLPKDALNRIDEDLIEE
type: DOMAIN
name: ATP-synt_VA_C
description: ATP synthase A/B type, C-terminal domain

phrase: PPINVLPSL
type: ACTIVE_SITE
name: ATPase_a/bsu_AS
description: ATPase, alpha/beta subunit, nucleotide-binding domain, active site

phrase: GVSAIDGMNTLVRGQKLPIFSASGLPHNDLALQIARQATVPEEEDGEDDEGSEFAVIFGAMGITAEEANEFMDDFERTGALERSVVFMNLADDPAVERTITPRLALTTAEYLAFEKDYHVLVILTDMTNYCEALREIGAAREEVPGRRGYPGYMYTDLAQLYERAGRIEGREGSVTQLPILTMPGDDDTHPIPDLTGYITEGQIYIDRDLNSQGIQPPINVLPSL
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_nucl-bd
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain

phrase: ITEISGPLVFVETDEPVGYDDIVEIELSDGETRRGQVLESASDYVAIQVFEGTEGIDRDASVRFL
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_N
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain
Protein sequence:
MFECWLVSKDGKHGRIRLPHAETVVIGRGPETQITDKKCSRHQVQLMADCNKGYVKVKQMGTNPTSINGVDIGNEHKVELKPGHTLYIVNNLYPYMIEFLEGSTNPRAKIENENRSSSKRTPENSLNVDTETPRKLVKKESNVSPSSSSGRISSCPTQGKSNVQEVKSQGHWSQDLKVSMQDPTMQVFKDDKIVVIKDKYPKARYHWLVLPWQSIASLKVLRAEHLELVQHMDAVGHNIAREHTNSKCAPFRFGYHAIPSMSHVHLHVISQDFDSPCLKNKKHWNSFTTDYFLESQAVIEMLKTHGKVNVKERISDVLKTPLLCHMCKKEQATMPQLKEHLKKHWPT

Annotated regions:
phrase: SQDLKVSMQDPTMQVFKDDKIVVIKDKYPKARYHWLVLPWQSIASLKVLRAEHLELVQHMDAVGHNIAREHTNSKCAPFRFGYHAIPSMSHVHLHVISQDFDSPC
type: DOMAIN
name: HIT-like
description: HIT-like domain

phrase: TTDYFLESQAVIEMLKTHGKVNVKERISDVLKTPLLCHMCKKEQATMPQLKEHLKKH
type: DOMAIN
name: Znf-C2HE
description: Aprataxin, C2HE/C2H2/C2HC zinc finger

phrase: CWLVSKDGKHGRIRLPHAETVVIGRGPETQITDKKCSRHQVQLMADCNKGYVKVKQMGTNPTSINGVD
type: DOMAIN
name: FHA_2
description: PNK, FHA domain

phrase: RFGYHAIPSMSHVHLHVI
type: CONSERVED_SITE
name: Histidine_triad_CS
description: Histidine triad, conserved site

phrase: FECWLVSKDGKHGRIRLPHAETVVIGRGPETQITDKKCSRHQVQLMADCNKGYVKVKQMGTNPTSINGVDIGNEHKVELKPGHTLYIVNNLYPYMIEFL
type: DOMAIN
name: FHA_APTX
description: Aprataxin, forkhead associated domain
Protein sequence:
MIPELGHLALILALCLALVQSSLPLVGAWRGDRQWMSLARPAAWGQFAFLAFAFGCLTWAFLRDDFSVAYVAGNSNSALPWYYKFSAVWGAHEGSLLLWALILGGWTFAVSIFSRQLPEVMLARVLAVMGMISTGFLLFLIITSNPFSRLLPQTPMDGNDLNPLLQDVGLIVHPPMLYMGYVGFSVAFAFAIAALLGGRLDAAWARWSRPWTLVAWAFLGIGIVLGSWWAYYELGWGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVRSGVLTSVHAFASDPERGVFILAFLLLVVGGSLTLFALRAPVVKSQVGFALWSRETLLLLNNLVLVVAASMILLGTLYPLLLDALSGAKLSVGPPYFNAMFLPLMAALMAALAVGVLVRWKDTPSRWLLGMLTPVLAASAVLAAAGSMYFGDFNWAVLAVFLLSAWVVLAGFRDFLDKTRHKGVLAGARSLTRSYWGMQLAHLGIAVCAIGIVLSSQYSAQRDLRMSPGDTVELGGYHFLFDGAKHHEGPNYTSDKGSIHVSRDGKEIATLHPEKRLYTVQSSMMTEAGIDAGFTRDLYVALGEPLENGAWAVRVHVKPFVRWIWFGGLLMGLGGALAALDRRYRVKVKTRVREALGLAGQGA

Annotated regions:
phrase: LAFLLLVVGGSLTLFALRAPVVKSQVGFALWSRETLLLLNNLVLVVAASMILLGTLYPLLLDALSGAKLSVGPPYFNAMFLPLMAALMAALAVGVLVRWKDTPSRWLLGMLTPVLAASAVLAAAGSMYFGDFNWAVLAVFLLSAWVVLAGFRDFLDKTRHKGVLAGARSLTRSYWGMQLAHLGIAVCAIGIVLSSQYSAQRDLRMSPGDTVELGGYHFLFDGAKHHEGPNYTSDKGSIHVSRDGKEIATLHPEKRLYTVQSSMMTEAGIDAGFTRDLYVALGEPLENGAWAVRVHVKPFVRWIWFGGLLMGLGGALAALD
type: DOMAIN
name: CcmF_C
description: Cytochrome c-type biogenesis protein CcmF, C-terminal

phrase: WGAHEGSLLLWALILGGWTFAVSIFSRQLPEVMLARVLAVMGMISTGFLLFLIITSNPFSRLLPQTPMDGNDLNPLLQDVGLIVHPPMLYMGYVGFSVAFAFAIAALLGGRLDAAWARWSRPWTLVAWAFLGIGIVLGSWWAYYELGWGGWWFWDPVENASFMPWLVGTALIHSLAVTEKRGVFKSWTVLLAIAAFSLSLLGTFLVR
type: DOMAIN
name: Cyt_c_assembly
description: Cytochrome c assembly protein