nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MNLVEWIVTIIMMTEFLLGNCANVFITIVNFIDCVKRRKISSADRIITAIAIFRIGLLWAMLTNWHSHVFTPDTDNLQMRVFGGITWAITNHFTTWLGTILSMFYLFKIANFSNSLFLHLKRKLDNVLLVIFLGSSLFLVAYLGMVNIKKIAWMSIHEGNVTTKSKLKHVTSITNMLLFSLINIVPFGISLNCVLLLIYSLSKHLKNMKFYGKGCQDQSTMVHIKALQTVVSFLLLYATYSSCVIISGWSLQNAPVFLFCVTIGSFYPAGHSCILIWGNQKLKQVFLLLLRQMRC

Annotated regions:
Protein sequence:
MKLVFATNNAHKLEEIKEMLGSQHEIVSLKEIQCHEDIPEEQDTLEGNALQKARYIHEKYGLDCFADDTGLEIKALNNAPGVYSARYAGNAHDSEANMKKVLQEMQNISERQARFRTVIALILGEKEYLFEGIVNGEILTSKHGHEGFGYDPIFRPEGFQESFAEMPLHEKNEISHRGQAVRALCRFLNNL

Annotated regions:
Protein sequence:
MAQKIQSVKGMNDLLPVEQKDFKLTAAFWQAFEDTVNRWTRAYGYRQIRTPIVEQTGLFVRSIGEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRERPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLWEKLGIREYLTLEINSLGNREERAAHRAALVEYLTRYEDKLDEDSKRRLKTNPLRVLDTKNPDLQEICNAAPRLVDYLGEASQNHYARFKAMLDGLGIQYIENPRLVRGLDYYNQTVFEWTTDKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAMGIERLLLLVSEYGSLEVNAAPDVYAMHQGERADLQVMKYAQALRTQGFNVMQHSGYQSLKAQMKKADNSGARFALIVAQDELANGTVTLKDMNGAHGQQTVAAEDLTHTLQQWKNA

Annotated regions:
phrase: RADLQVMKYAQALRTQGFNVMQHSGYQSLKAQMKKADNSGARFALIVAQDELANGTVTLKDMNGAHGQQTVAAEDLTHTLQ
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: WQAFEDTVNRWTRAYGYRQIRTPIVEQTGLFVRSIGEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRERPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLWEKLGIREYLTLEINSLGNREERAAHRAALVEYLTRYEDKLDEDSKRRLKTNPLRVLDTKNPDLQEICNAAPRLVDYLGEASQNHYARFKAMLDGLGIQYIENPRLVRGLDYYNQTVFEWTTDKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAMGIERLLLLVSEYGSLEVNAA
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: AAFWQAFEDTVNRWTRAYGYRQIRTPIVEQTGLFVRSIGEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRERPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLWEKLGIREYLTLEINSLGNREERAAHRAALVEYLTRYEDKLDEDSKRRLKTNPLRVLDTKNPDLQEICNAAPRLVDYLGEASQNHYARFKAMLDGLGIQYIENPRLVRGLDYYNQTVFEWTTDKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAMGIERLLLL
type: DOMAIN
name: HisRS-like_core
description: Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain

phrase: APDVYAMHQGERADLQVMKYAQALRTQGFNVMQHSGYQSLKAQMKKADNSGARFALIVAQDELANGTVTLKDMNGAHGQQTVAAEDLTHTL
type: DOMAIN
name: HisRS_anticodon
description: Histidyl-anticodon-binding

phrase: AAFWQAFEDTVNRWTRAYGYRQIRTPIVEQTGLFVRSIGEETDVVGKEMYTFSDSNDSLSLSLRPEGTASCLRAVVEHNLLYNSPQKLWYMGPMFRRERPQKGRYRQFHQVGIEALGFEGPDIDAEIIAMSADLWEKLGIREYLTLEINSLGNREERAAHRAALVEYLTRYEDKLDEDSKRRLKTNPLRVLDTKNPDLQEICNAAPRLVDYLGEASQNHYARFKAMLDGLGIQYIENPRLVRGLDYYNQTVFEWTTDKLGAQATVCGGGRYDGLIEELGGKPAPSIGFAMGIER
type: DOMAIN
name: HisRS-like_core
description: Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain
Protein sequence:
MSLTLINVLAAALIALAFVAVNAAYLVWAERRGAAFIQRRLGPVENGPWGLLQPPVDGIKLMTKQLVIPGGVDKILFMVAPVLAMFPALMSFVTIPFSENIVAHNMDIGLLVILAFASFAGLAILLAGWSSRNKYSMMAAIRAVSQTIAYEIPMLITAITVVLVSGSVDFIEIVHSQSGGFWHWNLWPLKPGLFNIFMPISFLIFFICSLAETNRAPFDLGEAESELVAGFHTEYSSMGFGLFFMGEYANIVIGACLTTLLFLGGWDCPFGLFPGVWWFLIKIYILIFTFIWIRWTFPRTTIYGLLNLSWKILIPLSLINLLLTAGFIKVFAP

Annotated regions:
phrase: PFDLGEAESELVA
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_su1_CS
description: NADH:ubiquinone oxidoreductase, subunit 1, conserved site
Protein sequence:
MARITILPDILCNQIAAGEVVERPAAVAKELLENSIDAGARRISLSIADGGRKEIRVVDNGSGMHPDDALLALERHATSKIRSIEDLQAIGSLGFRGEALPSIAAVSRFELVTREPDAVAGTFIRVEGGVVREVRETGSPAGTRITVRDLFYNVPARRKFLRAADTETAYICDQFQRLAMAHHAVHFQLINRERTQYDFPGAASPEERAGQVLGAETLKRAIPFCVENASARLRGMVGTPDLQRANSHSLFVFVNGRPVWDRAVNRAILAAFESLIPRGKFPVAVLFLELDPLHVDVNVHPTKREVRFKHPGGVIDTVRGAIRDALCHLRPLHGSAAAAPRPFSETADQRAFRDSLVREGQLSFDRGRPLSRPPGFPSERWRERHRPDAEPPYPLLREPAPTENPRREAGSPPAAPADSLFDEGAAPQPDNPDTDFFAEPKRAAGGPASTHAPVTVDTAAFADAFQAFEAATHLHAGDVPALAELPVIGQLANTYILLEAPDGLILIDQHAAHERIIFDALSFPAGGPARQRLIRPAVIDLPPRDAAMLRRWLPLLEEIGVEIESFGGDSFVVHAVPAPLGECPPEGLVRELLASAIEGDDAPRWNVLGRLAKTAACHRAVRAGQRLRPEEIRLLLEGLDRTRFASTCPHGRPVWYKMTLSDVARLFQRT

Annotated regions:
phrase: VIGQLANTYILLEAPDGLILIDQHAAHERIIFDALSFPAGGPARQRLIRPAVIDLPPRDAAMLRRWLPLLEEIGVEIESFGGDSFVVHAVPAPLGECPPEGLVRELLASAIEGDDAPRWNVLGRLAKTAACHRAVRAGQR
type: DOMAIN
name: MutL_C
description: MutL, C-terminal, dimerisation

phrase: GFRGEA
type: CONSERVED_SITE
name: DNA_mismatch_repair_CS
description: DNA mismatch repair, conserved site

phrase: IGQLANTYILLEAPDGLILIDQHAAHERIIFDALSFPAGGPARQRLIRPAVIDLPPRDAAMLRRWLPLLEEIGVEIESFGGDSFVVHAVPAPLGECPPEGLVRELLASAIEGDDAPRWNVLGRLAKTAACHRAVRAGQR
type: DOMAIN
name: MutL_C
description: MutL, C-terminal, dimerisation

phrase: AGQVLGAETLKRAIPFCVENASARLRGMVGTPDLQRANSHSLFVFVNGRPVWDRAVNRAILAAFESLIPRGKFPVAVLFLELDPLHVDVNVHPTKREVRFKHPGGVIDTVRGAIRDAL
type: DOMAIN
name: DNA_mismatch_S5_2-like
description: DNA mismatch repair protein, S5 domain 2-like

phrase: QVLGAETLKRAIPFCVENASARLRGMVGTPDLQRANSHSLFVFVNGRPVWDRAVNRAILAAFESLIPRGKFPVAVLFLELDPLHVDVNVHPTKREVRFKHPGGVIDTVRGAIRDA
type: DOMAIN
name: DNA_mismatch_S5_2-like
description: DNA mismatch repair protein, S5 domain 2-like
Protein sequence:
MLALYQPDIPQNCGTMLRLCACLGVEAAIIEPAGFPVSDRHFRRAGMDYLDQVALSRHVSFTAFRAWQIETGRRLVLLSTKASQPYTDFTFRPDDILLMGRESAGVPEAVHASADARVVIPLRPPMRSLNVAVAAAMVLGEALRQVGALAKVMDAPRASL

Annotated regions:
phrase: LALYQPDIPQNCGTMLRLCACLGVEAAIIEPAGFPVSDRHFRRAGMDYLDQVALSRHVSFTAFRAWQIETGRRLVLLSTKASQPYTDFTFRPDDILLMGRESAGVPEAVHASADARVVIPLRPPMRSLNVAVAAAMV
type: DOMAIN
name: SpoU_MeTrfase
description: tRNA/rRNA methyltransferase, SpoU type
Protein sequence:
MKIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAEELGGPVWVVKAQIHAGGRGKGGGVKVAKSLEQVREYANQILGMQLVTHQTGPEGQKVNRLLIEEGADIKQELYVSLVVDRISQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDSQADDLATKIGVPAASIPQARAILQGLYKAFWETDASLAEINPLNVSGDGKVVALDAKFNFDSNALFRHPEIVAYRDLDEEDPAEIEASKFDLAYISLDGNIGCLVNGAGLAMATMDTIKLFGGEPANFLDVGGGATTEKVTEAFKLMLKNPGLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLNVPLVVRMKGTNEDLGKKMLADSGLPIISADSMEEAAQKVVAAAAGK

Annotated regions:
phrase: GNIGCLVNGAGLAMATMDTIKLFGG
type: CONSERVED_SITE
name: Succ-CoA_synthase_bsu_CS
description: Succinyl-CoA synthetase, beta subunit, conserved site

phrase: LVNGAGLAMATMDTIKLFGGEPANFLDVGGGATTEKVTEAFKLMLKNPGLKAILVNIFGGIMRCDVIAEGVIAGSKAVNLNVPLVVRMKGTNEDLGKKMLADSGLPIISADSMEEAAQKV
type: DOMAIN
name: SUCC_ACL_C
description: ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain

phrase: KIHEYQGKEILRKFGVAVPRGKPAFSVDEAVKVAEELGGPVWVVKAQIHAGGRGKGGGVKVAKSLEQVREYANQILGMQLVTHQTGPEGQKVNRLLIEEGADIKQELYVSLVVDRISQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDSQADDLATKIGVPAASIPQARAILQGLYKAFWETDASLAEINPL
type: DOMAIN
name: ATP-grasp_succ-CoA_synth-type
description: ATP-grasp fold, succinyl-CoA synthetase-type

phrase: KEILRKFGVAVPRGKPAFSVDEAVKVAEELGGPVWVVKAQIHAGGRGKGGGVKVAKSLEQVREYANQILGMQLVTHQTGPEGQKVNRLLIEEGADIKQELYVSLVVDRISQKIVLMGSSEGGMDIEEVAEKHPELIHKVIVEPSTGLLDSQADDLATKIGVPAASIPQARAILQGLYKAFWETDASLAEINPLNVSGDGKVVALDAKFNFDSNALFRHPEIV
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold
Protein sequence:
MSWQAYVDDHLMCDIEGHEGHRLTAAAIVGHDGSVWAQSATFPQFKPEEMNGIMTDFNEPGHLAPTGLHLGETKYMVIQGEAGAVIRGKKGSGGITIKKTGQALVFGIYEEPVTPGQCNMVVERLGDYLLEQGL

Annotated regions:
phrase: MSWQAYV
type: CONSERVED_SITE
name: Profilin_CS
description: Profilin conserved site
Protein sequence:
MPPRCPFLRHLFFLLLLLSPWIMSPCGGAADDVTYPIVPSSPGRRSILQIRREPPTEPNTKLVVDRDGKVFLKQQPKETPYWSFSTGSPMHSLYQAPANNNTENATEITRPHIIVEYLNNSKAATTVDGYHNWTVQEFFRQKPLVTDDGVTLGSETTSAYLVDGRSGRLIHVYKSTGDTKITNALVKPASTEDFVNEPLLIRRTDSKLEHFSKTTGKLVWNLTVSHFRAALLCDPVFNSGYDLGPKLQTGIYMPLLCGSQIDVRGPEIVIRVLHDQPMNVKMLPSPSLNHFESENSIMPFGKARESRKLQEQHKQKYTYLFGQWSPVKLLAPLVLLGVVVSVFIKKFSSRGSDVSLKAGPSKKKKNRKSAKDTNRQSVPRGQDQFELIEGGQMLLGFNNFQSGATDGRKIGKLFLSSKEIAKGSNGTVVFEGIYEGRPVAVKRLVRSHHEVAFKEIQNLIASDQHTNIIRWYGVEYDQDFVYLSLERCTCSLDDLIKSYLEFSMTKVLENNDSTEGVAAYKIQLDSLEGVIKGNNFWKVGGHPSPLMLKLMRDIVCGIVHLHELGIVHRDLKPQNVLISKDMTLSAKLSDMGISKRMSRDMSSLGHLATGSGSSGWQAPEQLLQGRQTRAVDMFSLGCVIFYTITGCKHPFGDDLERDVNIVKNKVDLFLVEHVPEASDLISRLLNPDPDLRPSATEVLLHPMFWNSEMRLSFLRDASDRVELENREADSEILKAMESTAPVAIGGKWDEKLEPVFITNIGRYRRYKY

Annotated regions:
phrase: FLSSKEIAKGSNGTVVFEGIYEGRPVAVKRLVRSHHEVAFKEIQNLIASDQHTNIIRWYGVEYDQDFVYLSLERCTCSLDDLIKSYLEFSMTKVLENNDSTEGVAAYKIQLDSLEGVIKGNNFWKVGGHPSPLMLKLMRDIVCGIVHLHELGIVHRDLKPQNVLISKDMTLSAKLSDMGISKRMSRDMSSLGHLATGSGSSGWQAPEQLLQGRQTRAVDMFSLGCVIFYTITGCKHPFGDDLERDVNIVKNKVDLFLVEHVPEASDLISRLLNPDPDLRPSATEVLLHPM
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: RLSFLRDASDRVELENREADSEILKAMESTAPVAIGGKWDEKLEPVFITNIGRYRRYK
type: DOMAIN
name: KEN_dom
description: KEN domain

phrase: IVHRDLKPQNVL
type: ACTIVE_SITE
name: Ser/Thr_kinase_AS
description: Serine/threonine-protein kinase, active site

phrase: SKEIAKGSNGTVVFEGIYEGRPVAVKRLVRSHHEVAFKEIQNLIASDQHTNIIRWYGVEYDQDFVYLSLERCTCSLDDLIKSYLEFSMTKVLENNDSTEGVAAYKIQLDSLEGVIKGNNFWKVGGHPSPLMLKLMRDIVCGIVHLHELGIVHRDLKPQNVLISKDMTLSAKLSDMGISKRMSRDMSSLGHLATGSGSSGWQAPEQLLQGRQTRAVDMFSLGCVIFYTITGCKHPFGDDLERDVNIVKNKVDLFLVEHVPEASDLISRLLNPDPDLRPSATEVLLHPM
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: SEMRLSFLRDASDRVELENREADSEILKAMESTAPVAIGGKWDEKLEPVFITNIGRYRRYK
type: DOMAIN
name: KEN_dom
description: KEN domain

phrase: FLSSKEIAKGSNGTVVFEGIYEGRPVAVKRLVRSHHEVAFKEIQNLIASDQHTNIIRWYGVEYDQDFVYLSLERCTCSLDDLIKSYLEFSMTKVLENNDSTEGVAAYKIQLDSLEGVIKGNNFWKVGGHPSPLMLKLMRDIVCGIVHLHELGIVHRDLKPQNVLISKDMTLSAKLSDMGISKRMSRDMSSLGHLATGSGSSGWQAPEQLLQGRQTRAVDMFSLGCVIFYTITGCKHPFGDDLERDVNIVKNKVDLFLVEHVPEASDLISRLLNPDPDLRPSATEVLLHPM
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain
Protein sequence:
MATSAAAKDDDSPATRFAVDQLKSIIERIERLEEEKKAISEDIKDVYAESKGNGFDVKALRTIIRLRKQDPNERQEEESILETYMQALGMI

Annotated regions:
phrase: VDQLKSIIERIERLEEEKKAISEDIKDVYAESKGNGFDVKALRTIIRLRKQDPNERQEEESILETYMQAL
type: DOMAIN
name: GapR-like_DNA-bd
description: GapR-like, DNA-binding domain
Protein sequence:
MVQTIDQAASLRGTVSLPADKSISHRSALLSALGTGRSRVYNFPDSADPQSTLDCVRTLGIEAGRNDEGVLAIHGRGLGGLHPPSEPLDCGNSGTTMRLLSGMMAGQEFGSVLTGDESLQQRPMERIADPLQAMGARIDLRSGHAPIRIRPQRSDGLRPLEYRLPVASAQVKSCVLLAGLYASGRTVVIETTPSRDHTERMLGLEVQEVGGERHIIVEEDHTVPAVDWSVPGDFSGAAFFLVAGTLVPDSELHLDDVGLNPSRTALLDVLDGMGADITVENERVQGSEPVGDITVRSASLSGIDIGGRLIPNLIDEIPVIAVAAACAEGRTEIRDAEELRVKETDRLHAMAQNLEALGAKVQEREDGLIIDGNGPNLLGAAVTSHDDHRIAMAMGVAGLVAHGTTTISDAECARVSFPGFWDELSRVSVS

Annotated regions:
phrase: DQAASLRGTVSLPADKSISHRSALLSALGTGRSRVYNFPDSADPQSTLDCVRTLGIEAGRNDEGVLAIHGRGLGGLHPPSEPLDCGNSGTTMRLLSGMMAGQEFGSVLTGDESLQQRPMERIADPLQAMGARIDLRSGHAPIRIRPQRSDGLRPLEYRLPVASAQVKSCVLLAGLYASGRTVVIETTPSRDHTERMLGLEVQEVGGERHIIVEEDHTVPAVDWSVPGDFSGAAFFLVAGTLVPDSELHLDDVGLNPSRTALLDVLDGMGADITVENERVQGSEPVGDITVRSASLSGIDIGGRLIPNLIDEIPVIAVAAACAEGRTEIRDAEELRVKETDRLHAMAQNLEALGAKVQEREDGLIIDGNGPNLLGAAVTSHDDHRIAMAMGVAGLVAHGTTTISDAECARVSFPGFWDE
type: DOMAIN
name: Enolpyruvate_Tfrase_dom
description: Enolpyruvate transferase domain

phrase: RVKETDRLHAMAQNLEAL
type: CONSERVED_SITE
name: EPSP_synthase_CS
description: 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site

phrase: LDCGNSGTTMRLLS
type: CONSERVED_SITE
name: EPSP_synthase_CS
description: 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site
Protein sequence:
MKFFVDTADVKEIRELNDLGLVDGVTTNPSLILKSGRDIIEVTKEICNIVKGPVSAEVAATEYEQMMKEAAVIARIADNICIKLPVTLDGLKACKALTSEGHKVNMTLCFSANQALLAAKAGATFISPFIGRLDDTGINGMELIAEIRTIYDNYDFRTEILAASVRTVNHVKEAALIGADVVTAPPATLKALVKHPLTDKGLETFLADWAKTGQKIA

Annotated regions:
phrase: GVTTNPSL
type: ACTIVE_SITE
name: Transaldolase_AS
description: Transaldolase, active site

phrase: ICIKLPVTLDGLKACKA
type: ACTIVE_SITE
name: Transaldolase_AS
description: Transaldolase, active site
Protein sequence:
MDNNFIFGIIAFTALVLVLAVIILFAKSKLVDSGDITISINDDPEKGITLPAGGKLLGALASKGIFVSSACGGGGSCGQCKVQVNSGGGEILPTELSHISKKEAKEGWRLACQVNVKSSMDVELPEEIFGVKKWECTVISNDNKATFIKELKLQIPEGEEVPFRAGGYIQIEAEPHTVNYKDFDIPKEYHEDWDKFNLWRYVSKVDEHIIRAYSMASYPEEKGIIMLNVRIATPPPRQPDAPPGQMSSYIWSLKAGDKVTISGPFGEFFAKETDNEMVFIGGGAGMAPMRSHIFDQLKRLKSKRKMSFWYGARSKREMFYVEDFDQLQAENDNFKWHVALSDPLPEDNWDGYTGFIHNVLYENYLKNHEAPEDCEYYMCGPPVMNAAVIGMLKSLGVEDENILLDDFGG

Annotated regions:
phrase: FIGGGAGMAPMRSHIFDQLKRLKSKRKMSFWYGARSKREMFYVEDFDQLQAENDNFKWHVALSDPLPEDNWDGYTGFIHNVLYENYLKNHEAPEDCEYYMCGPPVMNAA
type: DOMAIN
name: OxRdtase_FAD/NAD-bd
description: Oxidoreductase FAD/NAD(P)-binding

phrase: RAYSMAS
type: DOMAIN
name: Flavoprot_Pyr_Nucl_cyt_Rdtase
description: Flavoprotein pyridine nucleotide cytochrome reductase

phrase: VFIGGGAGMAPMRSHIFDQ
type: DOMAIN
name: Flavoprot_Pyr_Nucl_cyt_Rdtase
description: Flavoprotein pyridine nucleotide cytochrome reductase

phrase: RKMSFWYGA
type: DOMAIN
name: Flavoprot_Pyr_Nucl_cyt_Rdtase
description: Flavoprotein pyridine nucleotide cytochrome reductase

phrase: EYYMCGPP
type: DOMAIN
name: Flavoprot_Pyr_Nucl_cyt_Rdtase
description: Flavoprotein pyridine nucleotide cytochrome reductase

phrase: VKKWECTVISNDNKATFIKELKLQIPEGEEVPFRAGGYIQIEAEPHTVNYKDFDIPKEYHEDWDKFNLWRYVSKVDEHIIRAYSMASYPEEKGIIMLNVRIATPPPRQPDAPPGQMSSYIWSLKAGDKVTISGPFGEFFA
type: DOMAIN
name: FAD-bd_FR_type
description: FAD-binding domain, ferredoxin reductase-type

phrase: KGITLPAGGKLLGALASKGIFVSSACGGGGSCGQCKVQVNSGGGEILPTELSHISKKEAKEGWRLACQVN
type: DOMAIN
name: 2Fe-2S_ferredoxin-type
description: 2Fe-2S ferredoxin-type iron-sulfur binding domain

phrase: GDITISINDDPEKGITLPAGGKLLGALASKGIFVSSACGGGGSCGQCKVQVNSGGGEILPTELSHISKKEAKEGWRLACQVNVKSSMDVELPEE
type: DOMAIN
name: 2Fe-2S_ferredoxin-type
description: 2Fe-2S ferredoxin-type iron-sulfur binding domain

phrase: DEHIIRAYSMASYPEEKGIIMLNVRIATPPPRQPDAPPGQMSSYIWSLKAGDKVTISGPFGE
type: DOMAIN
name: Cbr1-like_FAD-bd_dom
description: Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain
Protein sequence:
MTSPASGVPEPADPKARLAELVERLAAADAAYYRDDAPIMDDAAYDALRREAESLRAAHPDLAAALDQVGAAPSGAFGKVRHRLPMLSLDNVFEPADFVEFCASIRRFLGLGAAPLAFVAEPKIDGLSISLTYENRRFVRGATRGDGTEGEDVTENLRTLRELPATLPDDAPDFIEIRGEVYMTKTDFITLNQGQARQFANPRNAAAGSLRQLDPAVTASRRLSLFAYARGAASQAVGETHWDYLAILRRWGFPVNPLAERVSEAGAEPFQRSIGERRAGLDYDIDGVVYKIDDLALQERLGFAGRAPRWAVAWKFPAERALTTLLGIDIQVGRTGALTPRARLDPVNVGGVLVSHATLHNEDEIARKDVRIGDTVELQRAGDVIPQILRALPERRPADSVPFVFPDHCPVCGALAIRPAGEVVRRCTGGLSCPAQVVERLIHFCSRLAFDIEGMGEKTVQEFHGLGWLESPADIFTLRDREAAIAALEGWGEVSARKLIAAIDARRRISLARFIYALGIRRIGEQNAKLLARHYSSYAVWRRQMEEAGVIGSDARLELGSISGIGPSIAEELAGFFAEPHNRDLLDRLVPMLTIEDEVAAAGGALAGKTIVFTGTLESLTRPEAKARAEALGARVTESVSKKTDFVVVGADAGSKAAKAASLGVTVLSEAEFRSLAGLPPG

Annotated regions:
phrase: AAGGALAGKTIVFTGTLESLTRPEAKARAEALGARVTESVSKKTDFVVVGADAGSKAAKAASLGVTVLS
type: DOMAIN
name: BRCT_dom
description: BRCT domain

phrase: HCPVCGALAIRPAGEVVRRCTGGLSCP
type: DOMAIN
name: Znf_DNAligase_C4
description: Zinc-finger, NAD-dependent DNA ligase C4-type

phrase: AFGKVRHRLPMLSLDNVFEPADFVEFCASIRRFLGLGAAPLAFVAEPKIDGLSISLTYENRRFVRGATRGDGTEGEDVTENLRTLRELPATLPDDAPDFIEIRGEVYMTKTDFITLNQGQARQFANPRNAAAGSLRQLDPAVTASRRLSLFAYARGAASQAVGETHWDYLAILRRWGFPVNPLAERVSEAGAEPFQRSIGERRAGLDYDIDGVVYKIDDLALQERLGFAGRAPRWAVAWKFPA
type: DOMAIN
name: DNAligase_adenylation
description: NAD-dependent DNA ligase, adenylation

phrase: LAGKTIVFTGTLESLTRPEAKARAEALGARVTESVSKKTDFVVVGADAGSKAAKAASLGVTVLSEAEF
type: DOMAIN
name: BRCT_dom
description: BRCT domain

phrase: DPKARLAELVERLAAADAAYYRDDAPIMDDAAYDALRREAESLRAAHPDLAAALDQVGAAPSGAFGKVRHRLPMLSLDNVFEPADFVEFCASIRRFLGLGAAPLAFVAEPKIDGLSISLTYENRRFVRGATRGDGTEGEDVTENLRTLRELPATLPDDAPDFIEIRGEVYMTKTDFITLNQGQARQFANPRNAAAGSLRQLDPAVTASRRLSLFAYARGAASQAVGETHWDYLAILRRWGFPVNPLAERVSEAGAEPFQRSIGERRAGLDYDIDGVVYKIDDLALQERLGFAGRAPRWAVAWKFPAERALTTLLGIDIQVGRTGALTPRARLDPVNVGGVLVSHATLHNEDEIARKDVRIGDTVELQRAGDVIPQILRALPERRPADSVPFVFPDHCPVCGALAIRPAGEVVRRCTGGLSCPAQVVERLIHFCSRL
type: DOMAIN
name: DNAligase_N
description: NAD-dependent DNA ligase, N-terminal

phrase: TTLLGIDIQVGRTGALTPRARLDPVNVGGVLVSHATLHNEDEIARKDVRIGDTVELQRAGDVIPQILRALPERRPA
type: DOMAIN
name: NAD_DNA_ligase_OB
description: NAD-dependent DNA ligase, OB-fold

phrase: ARLAELVERLAAADAAYYRDDAPIMDDAAYDALRREAESLRAAHPDLAAALDQVGAAPSGAFGKVRHRLPMLSLDNVFEPADFVEFCASIRRFLGLGAAPLAFVAEPKIDGLSISLTYENRRFVRGATRGDGTEGEDVTENLRTLRELPATLPDDAPDFIEIRGEVYMTKTDFITLNQGQARQFANPRNAAAGSLRQLDPAVTASRRLSLFAYARGAASQAVGETHWDYLAILRRWGFPVNPLAERVSEAGAEPFQRSIGERRAGLDYDIDGVVYKIDDLALQERLGFAGRAPRWAVAWKFP
type: DOMAIN
name: DNAligase_adenylation
description: NAD-dependent DNA ligase, adenylation

phrase: RFIYALGIRRIGEQNAKLLARHYSSYAVWRRQMEEAGVIGSDARLELGSISGIGPSIAEELAGFFAEPHNRD
type: DOMAIN
name: DisA/LigA_HHH
description: DisA/LigA, helix-hairpin-helix motif

phrase: KIDGLSISLTYENRRFVRGATRGDGTEGE
type: ACTIVE_SITE
name: DNA_ligase_AS
description: NAD-dependent DNA ligase, active site

phrase: GGALAGKTIVFTGTLESLTRPEAKARAEALGARVTESVSKKTDFVVVGADAGSKAAKAASLGVTVLSEAEFRSLAGL
type: DOMAIN
name: BRCT_dom
description: BRCT domain
Protein sequence:
MLYLAKMRNAEGELTENEQKIASFLLAHVSELKTVSSRNLAKQLEVSQSSIVKFAQKLGAKGFTELRMALIEEYSVNREKKHDTALHLHSTITSEDSLEVIARKLNREKMFALEETCSLMDFDRLKQVINLISKARLIQITGVGGSALVGRDLSFKLMKIGYRVACEVDTHVQATIAQALQEGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLADYTLDTVSGETEWRSSSMSTRTAQNSVTDLLFVGMVQLNDVESLRMIERSSELINLLGRS

Annotated regions:
phrase: MLYLAKMRNAEGELTENEQKIASFLLAHVSELKTVSSRNLAKQLEVSQSSIVKFAQKLGAKGFTELRMALIEEYSV
type: DOMAIN
name: HTH_RpiR
description: Helix-turn-helix protein RpiR

phrase: ISKARLIQITGVGGSALVGRDLSFKLMKIGYRVACEVDTHVQATIAQALQEGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLADYTLDTVSGETEWRSSSMSTRTAQNSVTDLLF
type: DOMAIN
name: SIS_dom
description: SIS domain

phrase: MLYLAKMRNAEGELTENEQKIASFLLAHVSELKTVSSRNLAKQLEVSQSSIVKFAQKLGAKGFTELRMALIEEY
type: DOMAIN
name: HTH_RpiR
description: Helix-turn-helix protein RpiR

phrase: VINLISKARLIQITGVGGSALVGRDLSFKLMKIGYRVACEVDTHVQATIAQALQEGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLADYTLDTVSGETEWRSSSMSTRTAQNSVTDLLFVGMVQLND
type: DOMAIN
name: SIS_dom
description: SIS domain

phrase: DRLKQVINLISKARLIQITGVGGSALVGRDLSFKLMKIGYRVACEVDTHVQATIAQALQEGDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLADYTLDTVSGETEWRSSSMSTRTAQNSVTDLLFV
type: DOMAIN
name: RpiR-like_SIS
description: RpiR-like, SIS domain
Protein sequence:
MSSMTPQEIVSELDRHIVGQNGAKRAVAIALRNRWRRQQVDASLRHEITPKNILMIGPTGVGKTEIARRLARLADAPFIKVEATKFTEVGYVGKDVDSIVRDLVEVAVKQTREADMKKVRVRAEDAAEDRILDVLIPPARGAGVDTARTGEPAGDSTARQVFRKKLREGQLDDKEIEIDLADARPQFEIMSPAGMEEMTEQLRGMFSQMGQERRRARKLKIAEAMKLLVEEEAAKLVNEEEVKTRALANAEQNGIVFIDEIDKVASRQEAGGADVSRQGVQRDLLPLVEGTTVSTKYGMVKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVELTSLSVQDFEAILTQTHASLVKQYQALLETEGVTLDFTPEGITRLAHIAFEVNERTENIGARRLSTVMERLLDEVSYDATRLSGQTVVVDAGYVNARLQSLSQDEDLSRYIL

Annotated regions:
phrase: TPKNILMIGPTGVGKTEIARRLARLADAPFIKVEATKFTEVGYVGKDVDSIVRDLVEVAVKQTREADMKKVRVRAEDAAEDRILDVLIPPARGAGVDTARTGEPAGDSTARQVFRKKLREGQLDDKEIEIDLADARPQFEIMSPAGMEEMTEQLRGMFSQMGQERRRARKLKIAEAMKLLVEEEAAKLVNEEEVKTRALANAEQNGIVFIDEIDKVASRQEAGGADVSRQGVQRDLLPLVEGTTVSTKYGMVKTDHILFIASGAFHLAKPSDLIPELQGRFPIRVE
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LSVQDFEAILTQTHASLVKQYQALLETEGVTLDFTPEGITRLAHIAFEVNERTENIGARRLSTVMERLLDEVSYDATRLSGQTVVVDAGYVNAR
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal

phrase: ILMIGPTGVGKTEIARRLARLADAPFIKVEATKFTEVGYVGKDVDSIVRDLVE
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: FEIMSPAGMEEMTEQLRGMFSQMGQERRRARKLKIAEAMKLLVEEEAAKLVNEEEVKTRALANAEQNGIVFIDEIDKVASRQEAGGADVSRQGVQRDLLPLVEGTTVSTKYGMVKTDHILFIASGAFHLAKPSDLIPELQGRFPI
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core
Protein sequence:
MSKQKHSASSTRWLKEHFDDKYVNEAKKKGYRSRAIFKIEEIQNKDKLLKAGMTVVDLGAAPGGWSQFAAKVVGEGGRVIACDLLPMESIAGVSFLQGDFREEAVLNALLDRIQPDMVDVVMSDMAPNMAGNLSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDDYVKAVRDLFKVVKIRKPDSSRSRSREVFIVATGYKG

Annotated regions:
phrase: YRSRAIFKIEEIQNKDKLLKAGMTVVDLGAAPGGWSQFAAKVVGEGGRVIACDLLPMESIAGVSFLQGDFREEAVLNALLDRIQPDMVDVVMSDMAPNMAGNLSVDQPRAMYLVELALDMCRQVLAPNGSFVVKVFQGEGFDDYVKAVRDLFKVVKIRKPDSSRSRSREVFIVATG
type: DOMAIN
name: RNA_MeTrfase_FtsJ_dom
description: Ribosomal RNA methyltransferase, FtsJ domain
Protein sequence:
MTKLPMKDSFHLPDGIIYLDGNSLGALPKGVGERLQSMVQDEWGAHLIKGWNIDEWMAQPARVGNMVGRLIGAPEGSVTMGDTLSVKVFQALSAALKMRPDRRVILSDSGNFPSDLYMAQGLIQQLDNGFELRVVAPEEVESAMTDEIAVAMITQVDYRTGRMHDMAGITAAAHAAGAVMLWDLAHSAGAVPVDIAGCGAEFAVGCTYKYLNGGPGAPAFIYARPDIVADIQPALAGWLGHDAPFAFEPTYRPAPDIERMRVGTPPVIQMTALEVALKIWDDVDMTELRSASVRLCDLFIAEVEAKCPSLRLASPRDAAQRGSQVSFAFEDGYAAMQALIARGVIGDFRAPNIMRFGFTPLYIDETDVREAVRIIADVLDNRLWDQPEYHQKGRVT

Annotated regions:
Protein sequence:
MSAPAPEATIGTLPSLLGATREELGDALAAIGVPEREIRMRTAQVWHWIYFHGIRSFDTMLNVGKGLRTTLAAHYSLERPQVVSEQVSVDGTRKWLIRLPPVDAQDRGAEVECVYIPESDRGTLCISSQVGCTLTCSFCHTGTQKLVRNLSAREIVSQLVVAREKLGDFPGLVPPKDGLLPTEGNRPITNIVFMGMGEPLYNFDNVRKAVSVLSDGEGLSLSRRRITVSTAGVVPQMEALGREAGSMLAVSLHAVRDDLRDKLVPLNKKYPIKTLLEACRTYPGASNARRITFEYVMLKDINDSPAEARELIRLLKGIPAKINLIPFNPWPGAPYDCSDWDRIERFSDIVFNAGYASPVRTPRGRDILAACGQLKSETEKLRARARLLGED

Annotated regions:
phrase: LLGATREELGDALAAIGVPEREIRMRTAQVWHWIYFHGIRSFDTMLNVGKGLRTTLAA
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: ITNIVFMGMGEPLYNFDNVRKAVSVLSDGEGLSLSRRRITVSTAGVVPQMEALGREAGSMLAVSLHAVRDDLRDKLVPLNKKYPIKTLLEACRTYPGASNARRITFEYVMLKDINDSPAE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: ESDRGTLCISSQVGCTLTCSFCHTGTQKLVRNLSAREIVSQLVVAREKLGDFPGLVPPKDGLLPTEGNRPITNIVFMGMGEPLYNFDNVRKAVSVLSDGEGLSLSRRRITVSTAGVVPQMEALGREAGSMLAVSLHAVRDDLRDKLVPLNKKYPIKTLLEACRTYPGASNARRITFEYVMLKDINDSPAEARELIRLLKGIPAKINLIPFNPWPGAPYDCSDWDRIERFSDIVFNAGYASPVRTPRGRDI
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MTTIETTQGLERRVSITVPAETVTTAVRDELKRVAKNARVDGFRKGKVPAQIIEKRFGASVRQDVLNDLLPRHFFDLAFKEKVNLAGRPTFAVENYEEGKDLQFTATFEVYPEIQLQGLENIKVEKPVVEITDADVDNMVEVLRKQQATWAETDNAATKDDRVTIDFVGSIDGEEFQGGKANDFVLAMGQGRMIPGFEDGILGHKAGEQFDIEVTFPEDYHVENLKAKPAKFAITVKKVEVMVLPELTADFIAKFGPNTKTVDDLRAEIRKNMQRELKNALTARVKNQVIDGLIEQNQIDVPFAAVDQEIEVLRNQAAQRFGGNGEQAAQLPRELFEEQAKRRVQVGLLLAEVISSNELKADEEKAKAMIEDIASAYEQPAEVVEYYSKNNELMNNIRNVVLEEQAIDAVLAKAQVTEKASSFDEVMNPQA

Annotated regions:
phrase: TVDDLRAEIRKNMQRELKNALTARVKNQVIDGLIEQNQIDVPFAAVDQEIEVLRNQAAQRFGGNGEQAAQLPRELFEEQAKRRVQVGLLLAEVISSNELKADEEKAKAMIEDIASAYEQPAEVVEYYSKNNELMNNIRNVVLEEQAIDAV
type: DOMAIN
name: Trigger_fac_C
description: Trigger factor, C-terminal

phrase: DDRVTIDFVGSIDGEEFQGGKANDFVLAMGQGRMIPGFEDGILGHKAGEQFDIEVTFPEDYHVENLKAKPAKFAITVKKVEVMVL
type: DOMAIN
name: PPIase_FKBP_dom
description: FKBP-type peptidyl-prolyl cis-trans isomerase domain

phrase: NAATKDDRVTIDFVGSIDGEEFQGGKANDFVLAMGQGRMIPGFEDGILGHKAGEQFDIEVTFPEDYHVENLKAKPAKFAIT
type: DOMAIN
name: PPIase_FKBP_dom
description: FKBP-type peptidyl-prolyl cis-trans isomerase domain

phrase: TTIETTQGLERRVSITVPAETVTTAVRDELKRVAKNARVDGFRKGKVPAQIIEKRFGASVRQDVLNDLLPRHFFDLAFKEKVNLAGRPTFAVENYEEGKDLQFTATFEVYPEIQLQGLENIKVEKPVVEITDADVDNMVE
type: DOMAIN
name: Trigger_fac_ribosome-bd_bac
description: Trigger factor, ribosome-binding, bacterial