nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MPELPEVETVVRTLRGLVMGKTIERVSVHLARIVRQPDDVEAFKSLLVGQTIQDIQRRAKFIQFFLNEDVLVSHLRMEGRYGVYQADDPVEKHTHVVFHFTDGTELRYRDVRQFGTMDLFPKGKETTIGPLAKLGVEPLDKSFTPEVLGKLLKGRSTKIKPLLLNQECIVGLGNIYVDESLFKAGIHPEKPAGKLTDKEVIRLHESIVSTLQEAVEQGGSSIKSYVNGQGEMGMFQQSLLVYGRKDEACTKCGAEIIRFVVGGRGTHICPDCQKNQ

Annotated regions:
phrase: LVYGRKDEACTKCGAEIIRFVVGGRGTHICPDCQ
type: DOMAIN
name: Znf_DNA_glyclase/AP_lyase
description: Zinc finger, DNA glycosylase/AP lyase-type

phrase: PELPEVETVVRTLRGLVMGKTIERVSVHLARIVRQPDDVEAFKSLLVGQTIQDIQRRAKFIQFFLNEDVLVSHLRMEGRYGVYQADDPVEKHTHVVFHFTDGTELRYRDVRQF
type: DOMAIN
name: FPG_cat
description: Formamidopyrimidine-DNA glycosylase, catalytic domain

phrase: EACTKCGAEIIRFVVGGRGTHICPDCQK
type: DOMAIN
name: Znf_FPG/IleRS
description: Zinc finger, FPG/IleRS-type

phrase: MPELPEVETVVRTLRGLVMGKTIERVSVHLARIVRQPDDVEAFKSLLVGQTIQDIQRRAKFIQFFLNEDVLVSHLRMEGRYGVYQADDPVEKHTHVVFHFTDGTELRYRDVRQFGT
type: DOMAIN
name: FPG_cat
description: Formamidopyrimidine-DNA glycosylase, catalytic domain

phrase: LGVEPLDKSFTPEVLGKLLKGRSTKIKPLLLNQECIVGLGNIYVDESLFKAGIHPEKPAGKLTDKEVIRLHESIVSTLQEAVEQGGSSIK
type: DOMAIN
name: DNA_glyclase/AP_lyase_DNA-bd
description: DNA glycosylase/AP lyase, H2TH DNA-binding

phrase: LGVEPLDKSFTPEVLGKLLKGRSTKIKPLLLNQECIVGLGNIYVDESLFKAGIHPEKPAGKLTDKEVIRLHESIVSTLQEAVEQGGSSIKSY
type: DOMAIN
name: DNA_glyclase/AP_lyase_DNA-bd
description: DNA glycosylase/AP lyase, H2TH DNA-binding

phrase: PELPEVETVVRTLRGLVMGKTIERVSVHLARIVRQPDDVEAFKSLLVGQTIQDIQRRAKFIQFFLNEDVLVSHLRMEGRYGVYQADDPVEKHTHVVFHFTDGTELRYRDVRQFGTM
type: DOMAIN
name: FPG_cat
description: Formamidopyrimidine-DNA glycosylase, catalytic domain

phrase: CTKCGAEIIRFVVGGRGTHICPDC
type: BINDING_SITE
name: DNA_glyclase_Znf_dom_DNA_BS
description: DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site
Protein sequence:
MKYELTATEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNREPVMNLTEQEVQEQLDNLVKRHFLRTVSGFGNRVTKYEQRFCNSEFGDLKLSAAEVALVTTLLLRGAQTPGELRSRASRMHEFSDMAEVESTLERLASREDGPYVIRLAREPGKRESRYMHLFCGDVDELSLQTSAPESASGDLQSRVEALESEVAELKQRLDSLLAHLGE

Annotated regions:
Protein sequence:
MAMGVSLTSHNNPLLRHLSPSSSWVSRSSSRLSSSPLPSFLFPCRRTLLQRKLASTDGNVGYCTTTVCQGFQHSVHQRSSSVVFNGEWELRSESNKVRMVPKIIKVGNQTEVAETHQVPGTVSAWREEANKLRERNGQIARNLDDNGYFNGSVPIISSAPSYETSQKIDYEFKPRGTTRSTTATLNKELIGITQSEPVVSLPRKGLDVGDNMDVNPKGEGIQRPLISDKSSGTANGNKNTVAISKVERSTEPSNVRENLGKIYDKVLIVDNVQAAKDTVAKLVNQFRNHVHSCDTEVSGIEVKEETPVDHGELICFSIYCGPEADFGNGKSCIWVDVLGENGREVLAEFKPYFEDSFIRKVWHNYSFDSHIIRNHGIEISGFHADTMHMARLWDSARRIKGGYSLEALTSDPKVLGGTQTKEEAEFLGKISMKTIFGKRKLKKDGSEGKIVVIPPVEELQREDREAWISYSALDAISTLKLYESMTKKLQLMDWHLDGKPVLGRTMLDFYHEFWRPFGELLVKMEAEGILVDREYLAEIEKVAKAEQQVAGSRFRNWASKYCPDAKYMNIGSDTQLRQLFFGGISNSHDEVLPVEKLFKVPNIDKVIEEGKKTPTKFRNIKLHRISDSPLSTENFTASGWPSVGGDVLKELAGKVSAEYDFMDDVSDISLEEVVEDDDVETSETQKSKTDDETDTSAYGTAYVAFGGGERGKEACHAIASLCEVCSIDSLISNFILPLQGSNVSGKDGRVHCSLNINTETGRLSARRP

Annotated regions:
phrase: EADFGNGKSCIWVDVLGENGREVLAEFKPYFEDSFIRKVWHNYSFDSHIIRNHGIEISGFHADTMHMARLWDSARRIKGGYSLEALTSDPKVLGGTQTKEEAEFLGKISMKTIFGKRKLKKDGSEGKIVVIPPVEELQREDREAWISYSALDAISTLKLYESMTKKL
type: DOMAIN
name: 3'-5'_exonuclease_dom
description: 3'-5' exonuclease domain
Protein sequence:
MDQLSMKKMAAQAALQYVKPDSIIGVGSGSTVNCFIEVLGTIKETIKGAVAASKASEELLLRQGIEVFSANDVSGLDIYVDGADEINPQKMMIKGGGAALTREKIVAALAKKFICIVDSSKQVDVLGSTFALPIEVIPMARSQVARKLVALGGSPEYRENVVTDNGNVILDVYNFKIMNPIEMEKELNNVAGVVTNGIFALRSADIVIVGTPEGTKIIE

Annotated regions:
Protein sequence:
MNPAPNLVMVGPMGAGKSCIGRRLAERFGLEFVDVDQAIVEQVGSSIPAIFAQHGEAGFRQHEADTLQALLEQDNKLISTGGGTVLDPHNRQRICARGFVVHLHVSVPTQLTRLARDRNRPLLQRADREQLLHAMAAHRTPLYHEVADLSLETDHFSPAEATAQLVLRLAAQWRMSSAPA

Annotated regions:
phrase: RQHEADTLQALLEQDNKLISTGGGT
type: CONSERVED_SITE
name: Shikimate_kinase_CS
description: Shikimate kinase, conserved site
Protein sequence:
MASQDSDEALPANYKDYPDGSLLRVVFHNFLTYEHTSFLPTASLNMILGHNGSGKSSIICGICLACGGSPKSLGRSERIVEYIRHGCTEGYVEIAIADKQKGPQVVRLTIRVGEQPKYRLNDSATTQSEIADLRKHYNIQIDNPCAFLAQDKVKSFSEQSSIELLRNTEKAASADLDQQHIDLMKQREDSTSIEDKCTTSENAIKRLEDEIGKIMPLVENYRKKLALQSKLRLLEKKMKIMEFEKFDREYKAELQNMDGAMIEYREVEKSIAECEKHRKNLEDRIKKDRSQISQMQRSCNEILAKVQEKGDKKLMEDMMQRAKAKLESAKKAADQHEKDVEKARKMIDQARARLQEAVDTLNGYEEFQSEMKSLEQKYSTAERDSRQEEDAIQKKSYEMRQLENKKRDEEQNSQLNRQDRYRVLQNFSSDASKAYRWYQQNRSQFKGDVYMPIMDMVLKTPEAAKALENSVGVRDRTMFVCCYKEDELLINGKQHSWRINTSVVPAEKIYSEDIDAQLPSELSRLGFKYLVSNCFDAPAPLKQFLCNVSGLNRIPFGGSDVEKKIAEVSQAIEQTRYSVFLTANIRCQNSKSRYANNTLQSQSATREANTWRDQFFKVSPVAKRTDNSILEEIQKLKAEIDIRSEQLREKRGAIQKERDVLRQEQMQWKSKKQVHTKWKTELASEMAKLEALENEVVDISAIEEEYANVEKKAILETKKMLENSIRWHKEIIDKHRLIGIFELSESICKSRVNKSNSEAETHRSKLEDLKSVKDAAEDLLKTALNHKKAAASALMKECSLKTLDESKMSPAENKIYSSLVKMFEEADVPTDMNTLDQAITSEKTRLKLAEDSGEDGSIVHEQRLKVLDDDLVLEKTRQEKLIENRARIHDKLGDEINNWRKEVETMIEQINVNYVQFFDSLGCRGEVSLEVPENPLDIEKYGIMIMVCFRKGESMKRLDNKVQSGGERSVATMLYLLALQQLCPVPFRCIDEINQGMDPTNERKVFDIMVGMWNGTTGTLSKTQYFLLSPKLLHGLDMRENVNIVMVNSTLTNSHGKHYDTSAKIDATFAKMGISA

Annotated regions:
phrase: LRVVFHNFLTYEHTSFLPTASLNMILGHNGSGKSSIICGICLACGGSPKSLGRSERIVEYIRHGCTEGYVEIAIADKQKGPQVVRLTIRVGEQPKYRLNDSATTQSEIADLRKHYNIQIDNPCAFLAQDKVKSFSEQSSIELLRNTEKAASADLDQQHIDLMKQREDSTSIEDKCTTSENAIKRLEDEIGKIMPLVENYRKKLALQSKLRLLEKKMKIMEFEKFDREYKAELQNMDGAMIEYREVEKSIAECEKHRKNLEDRIKKDRSQISQMQRSCNEILAKVQEKGDKKLMEDMMQRAKAKLESAKKAADQHEKDVEKARKMIDQARARLQEAVDTLNGYEEFQSEMKSLEQKYSTAERDSRQEEDAIQKKSYEMRQLENKKRDEEQNSQLNRQDRYRVLQNFSSDASKAYRWYQQNRSQFKGDVYMPIMDMVLKTPEAAKALENSVGVRDRTMFVCCYKEDELLINGKQHSWRINTSVVPAEKIYSEDIDAQLPSELSRLGFKYLVSNCFDAPAPLKQFLCNVSGLNRIPFGGSDVEKKIAEVSQAIEQTRYSVFLTANIRCQNSKSRYANNTLQSQSATREANTWRDQFFKVSPVAKRTDNSILEEIQKLKAEIDIRSEQLREKRGAIQKERDVLRQEQMQWKSKKQVHTKWKTELASEMAKLEALENEVVDISAIEEEYANVEKKAILETKKMLENSIRWHKEIIDKHRLIGIFELSESICKSRVNKSNSEAETHRSKLEDLKSVKDAAEDLLKTALNHKKAAASALMKECSLKTLDESKMSPAENKIYSSLVKMFEEADVPTDMNTLDQAITSEKTRLKLAEDSGEDGSIVHEQRLKVLDDDLVLEKTRQEKLIENRARIHDKLGDEINNWRKEVETMIEQINVNYVQFFDSLGCRGEVSLEVPENPLDIEKYGIMIMVCFRKGESMKRLDNKVQSGGERSVATMLYLLALQQLCPVPFRCIDEINQGMDPTNERKVFDI
type: DOMAIN
name: RecF/RecN/SMC_N
description: RecF/RecN/SMC, N-terminal
Protein sequence:
MSDISDANKLKHRFRGYFPVVIDVETAGFNSQTDALLEIAVTLLKMDDEGLLGIDKTLHFNIEPFEGANLEPEALAFNGIDPTNPLRGAVSEKEAFLEIFKAVKKAQKASDCHRSIIVAHNAAFDHGFVSKAIERCDLKRSPFHPFATFDTATLAGLAIGHTVLAKACIMAGIPFDNKEAHSALYDTERTAELFCHIVNRWKQLGGWPLLAAGESEDADGEE

Annotated regions:
phrase: FPVVIDVETAGFNSQTDALLEIAVTLLKMDDEGLLGIDKTLHFNIEPFEGANLEPEALAFNGIDPTNPLRGAVSEKEAFLEIFKAVKKAQKASDCHRSIIVAHNAAFDHGFVSKAIERCDLKRSPFHPFATFDTATLAGLAIGHTVLAKACIMAGIPFDNKEAHSALYDTERTAELFCHIVNRWK
type: DOMAIN
name: Exonuclease_RNaseT/DNA_pol3
description: Exonuclease, RNase T/DNA polymerase III

phrase: VVIDVETAGFNSQTDALLEIAVTLLKMDDEGLLGIDKTLHFNIEPFEGANLEPEALAFNGIDPTNPLRGAVSEKEAFLEIFKAVKKAQKASDCHRSIIVAHNAAFDHGFVSKAIERCDLKRSPFHPFATFDTATLAGLAIGHTVLAKACIMAGIPFDNKEAHSALYDTERTAEL
type: DOMAIN
name: Exonuclease_RNaseT/DNA_pol3
description: Exonuclease, RNase T/DNA polymerase III
Protein sequence:
DLTPKVQVYSRFPASAGTKNVLNCFAAGFHPPKISITLMKDGVPMEGAQYSDMSFNDDWSFQRLVYADFTPSSDAVYTCKVDHETLKEPQVYKWDPEF

Annotated regions:
phrase: KNVLNCFAAGFHPPKISITLMKDGVPMEGAQYSDMSFNDDWSFQRLVYADFTPSSDAVYTCKVDHETLKE
type: DOMAIN
name: Ig_C1-set
description: Immunoglobulin C1-set

phrase: YTCKVD
type: CONSERVED_SITE
name: Ig/MHC_CS
description: Immunoglobulin/major histocompatibility complex, conserved site

phrase: VQVYSRFPASAGTKNVLNCFAAGFHPPKISITLMKDGVPMEGAQYSDMSFNDDWSFQRLVYADFTPSSDAVYTCKVDHET
type: DOMAIN
name: Ig_C1-set
description: Immunoglobulin C1-set

phrase: PKVQVYSRFPASAGTKNVLNCFAAGFHPPKISITLMKDGVPMEGAQYSDMSFNDDWSFQRLVYADFTPSSDAVYTCKVDHETLKEPQV
type: DOMAIN
name: Ig-like_dom
description: Immunoglobulin-like domain
Protein sequence:
MSVLEENRPFAQQLSNVYFTILSLFCFKLFVKISLAILSHFYIVKGNRKEAARIAAEFYGVTQGQGSWADRSPLHEAASQGRLLALRTLLSQGYNVNAVTLDHVTPLHEACLGDHVACARTLLEAGANVNAITIDGVTPLFNACSQGSPSCAELLLEYGAKAQLESCLPSPTHEAASKGHHECLDILISWGIDVDQEIPHLGTPLYVACMSQQFHCIWKLLYAGADVQKGKYWDTPLHAAAQQSSTEIVNLLLEFGADINAKNTELLRPIDVATSSSMVERILLQHEATPSSLYQLCRLCIRSYIGKPRLHLIPQLQLPTLLKNFLQYR

Annotated regions:
phrase: MVERILLQHEATPSSLYQLCRLCIRSYIGKPRLHLIPQLQLPTLLKNFLQY
type: DOMAIN
name: SOCS_box
description: SOCS box domain

phrase: DHVTPLHEACLGDHVACARTLLEAGANVNAIT
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: ATPSSLYQLCRLCIRSYIGKPRLHLIPQLQLPTLLKNFLQY
type: DOMAIN
name: ASB5_SOCS
description: Ankyrin repeat and SOCS box protein 5, SOCS box domain

phrase: GVTPLFNACSQGSPS
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: IVNLLLEFGADINA
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: TPSSLYQLCRLCIRSYIGKPRLHLIPQLQLPTLLKNFL
type: DOMAIN
name: SOCS_box
description: SOCS box domain

phrase: LHEAASQGRLLALRTLLSQGYNVNAVTLDHVTPLHEACLGDHVACARTLLEAGANVNAITIDGVTPLFNACSQGSPSCAELLLEYGAKA
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: HEAASKGHHECLDILISWGIDVDQEIPHLGTPLYVACMSQQFHCIWKLLYAGADVQKGKYWDTPLHAAAQQSSTEIVNLLLEFGADINAK
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: DGVTPLFNACSQGSPSCAELLLEYGAKAQLES
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: ADRSPLHEAASQGRLLALRTLLSQGYNVN
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: DHVTPLHEACLGDHVACARTLLEAGANVN
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: HLGTPLYVACMSQQFHCIWKLLYAGADVQ
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: YWDTPLHAAAQQSSTEIVNLLLEFGADIN
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: CLPSPTHEAASKGHHECLDILISWGIDVD
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: DGVTPLFNACSQGSPSCAELLLEYGAKAQ
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: PSSLYQLCRLCIRSYIGKPRLHLIPQLQLPTLLKNFLQY
type: DOMAIN
name: SOCS_box
description: SOCS box domain

phrase: ADRSPLHEAASQGRLLALRTLLSQGYNVNAVT
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: YWDTPLHAAAQQSSTEIVNLLLEFGADINAKN
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat
Protein sequence:
MIVDKLQEDSRGGEGLLDGAAGEGGLMTSPLNLAYFYGGSPPAAALGANEACFSSSGHSTPGSPGSDSSDFSSSSSVSTASSCSAVGESRARGGPRADRVPGEHHMAGGRQQRGPFQGVRVRNSVKELLLHIRSSKQKSPAPPVDDLKAQSVTTEQFPELKTILTHSGKRKGTEPISDGPVCKRPTISLQTQILTPPQTPTPVDSMEDVHINEPKQNNNSDLLQNIMNIKNESSPVSLNTVQFSWMSPVVINQNSPREQYQDFHRGQILTPPQKYQPFPVSSPPQVMEQSQMYQFSSQSPDLQQPYSHVSVPECSPYSGKPQSSAFESNLFDGQDLLFCPTQSFASLLSGPGEPENIAVPIQTSPGAQQQQQQPQAQPNAPINTQNFNLGPNSVCDVLRGQDPGVAPLNVSLPLRNTTGNSMNTTQLGKSFFQWQVEQEESKLANLSQDHFLSKDADGDTLLHIAVAQGRRALSYVLARKMSALQMLDIKEHNGQSAFQVAVAANQHLIVQDLVNLGAQVNTTDCWGRTPLHVCAEKGHSQVLQAIQKGAICSNQFIDLEATNYDGLTALHCAVVAHNAVVHELQRNQQHHSPEVQELLLKNKSLVDTIKCLIQMGATVEAKDRKSGRTALHLAAEEANLELIRFFLELPSCLSFVNAKAYNGNTALHVAASLQYRVTQLDAVRLLMRKGADPSTRNLENEQPVHLVPDGPVGEQIRRILKGKSVQQRAPPY

Annotated regions:
phrase: NKSLVDTIKCLIQMGATVEAKDRKSGRTALHLAAEEANLELIRFFLELPSCLSFVNAKAYNGNTALHVAASLQYRVTQLDAVRLLMRKGADPST
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: VAVAANQHLIVQDLVNLGAQVNTTDCWGRTPLHVCAEKGHSQVLQAIQKGAICSNQFIDLEATNYDGLTALHCAVVAHNAVVHEL
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: SGRTALHLAAEEANLELIRFFLELPSCLSFVN
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: DGLTALHCAVVAHNAVVHELQRNQQHHSPEVQELLLKNKSLVDTIKCLIQMGATVE
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: WGRTPLHVCAEKGHSQVLQAIQKGAICSNQF
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: SGRTALHLAAEEANLELIRFFLELPSCLS
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: NGQSAFQVAVAANQHLIVQDLVNLGAQVN
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: DGDTLLHIAVAQGRRALSYVLARKMSALQ
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: NGNTALHVAASLQYRVTQLDAVRLLMRKGADPS
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: RGPFQGVRVRNSVKELLLHIRS
type: DOMAIN
name: OCA
description: OCA domain

phrase: NGQSAFQVAVAANQHLIVQDLVNLGAQVNTTD
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: GRTPLHVCAEKGHSQ
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: AVRLLMRKGADPST
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: NGNTALHVAASLQYRVTQLDAVRLLMRKGADPSTRN
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat
Protein sequence:
MSNLNGFIVVDKPKGPTSHQIDSWIRDITGEPRVGHIGTLDPGVSGVLVMALGKATKLIDIVHRESKEYVSVLRTYDKYDHDSIKSVFKEFTGKIYQIPPVRSAVSRELRIREIYNLELLEMDEKFVLFKVCCESGTYIRTLCTDIGYVLGSGGQMAELRRTRTGPFDESMCHTLQEVSDAFKLKSMGNEKLFKNIFIPMDFIFIKYPKVIVKETALKNIAHGSDIYPAGIHAITGSPKKGDVVAVYTEKNELVATGTMMVNADEIYDLKVIDIDNVLIETGDNDGKDSLVRKDNRWKDIPVQKPERKLHGNLQGSQEWKDTGNRGNPKRGGTGSKGFSSGFRKRKAKR

Annotated regions:
phrase: RDITGEPRVGHIGTLDPGVSGVLVMALGKATKLIDIVHRESKEYVSVLRTYDKYDHDSIKSVFKEFTGKIYQIPPVRSAVSRELRIREIYNLELLEMDEKFVLFKVCCESGTY
type: DOMAIN
name: PsdUridine_synth_N
description: Pseudouridine synthase II, N-terminal

phrase: PKVIVKETALKNIAHGSDIYPAGIHAITGSPKKGDVVAVYTEKNELVATGTMMVNADEIYDLKVIDIDNVL
type: DOMAIN
name: PUA
description: PUA domain

phrase: PKVIVKETALKNIAHGSDIYPAGIHAITGSPKKGDVVAVYTEKNELVATGTMMVNADEIYDLKVID
type: DOMAIN
name: PUA
description: PUA domain

phrase: RTLCTDIGYVLGSGGQMAELRRTRTGPFDESMCHTLQEVSDAFKLKSMGNEKLFKNIFIPMD
type: DOMAIN
name: TruB_C
description: tRNA pseudouridylate synthase B, C-terminal
Protein sequence:
MFKGSIPALITPFTDNGSVDEKAFAAHVEWQIAEGSNGLVPVGTTGESPTLSHDEHKRVVELCIEVAAKRVPVIAGAGSNNTDEAIELALHAQEAGADALLVVTPYYNKPTQKGLFAHFSAVAEAVKLPIVIYNIPPRSVVDMSPETMGALVKAHKNIIGVKDATGKLDRVSEQRISCGKDFVQLSGEDGTALGFNAHGGVGCISVTANVAPRLCSEFQAAMLAGDYAKALEYQDRLMPLHRAIFMEPGVCGTKYALSKTRGGNRRVRSPLMSTLEPATEAAIDAALKHAGLMN

Annotated regions:
phrase: YNIPPRSVVDMSPETMGALVKAHKNIIGVKD
type: ACTIVE_SITE
name: Schiff_base-form_aldolases_AS
description: Schiff base-forming aldolase, active site

phrase: GLVPVGTTGESPTLSHD
type: CONSERVED_SITE
name: Schiff_base-form_aldolases_CS
description: Schiff base-forming aldolase, conserved site
Protein sequence:
MTTETRSLYSQLPAIDRLLRDSSFLSLRDTYGHTRVVELLRQMLDEAREVIRGSQTLPAWCENWAQEVDARLTKEAQSALRPVINLTGTVLHTNLGRALQAEAAVEAVAQAMRSPVTLEYDLDDAGRGHRDRALAQLLCRITGAEDACIVNNNAAAVLLMLAATASGKEVVVSRGELVEIGGAFRIPDVMRQAGCTLHEVGTTNRTHANDYRQAVNENTALLMKVHTSNYSIQGFTKAIDEAELVALGKELDVPVVTDLGSGSLVDLSQYGLPKEPMPQELIAAGVSLVSFSGDKLLGGPQAGIIVGKKEMIARLQSHPLKRALRADKMTLAALEATLRLYLHPEALSEKLPTLRLLTRSAEVIQIQAQRLQAPLVAHYGAEFAVQVMPCLSQIGSGSLPVDRLPSAALTFTPHDGRGSHLESLAARWRELPVPVIGRIYDGRLWLDLRCLEDEQRFLEMLLK

Annotated regions:
phrase: YSQLPAIDRLLRDSSFLSLRDTYGHTRVVELLRQMLDEA
type: DOMAIN
name: SelA_trans_N_dom
description: L-seryl-tRNA selenium transferase N-terminal domain
Protein sequence:
MRSTTFDKNSGAPEEPRRPRGPRTPDGEPTEANERPCSSSSSLSNDSFVPAPQGPQNGHTSSSHDNDYSEYRPRRGPKTPPLPPPDEPVKQQQQQQPIVAPYSYYPTYGSSTGYPYPYPTMMMPQQGIPGPSQHPATPSYYIQHPPPPSMSNGAPYYPHMNPSPYYQPRPNYVTQPPAPIIPPPQPPVMTASAAAAAYRDRLPPPPPKPPMPDLRTKEPIGIRSWNGSGIPPPPILPPVACLSSTMSPGMLRSPVPRERFNSVESNGSFSLHPPPPVPPPAKKPLNMDVRELLNGAHQTTVESVKKDPPAPQPRPRPIPVPPTTSYNSSFCGLLPPPPVPPDLRASAASAAASPPMVQDASFSSVLTPKTKAPEKIPSPPATVTSSTDSLEHMQRKRKKQQETEEQEKAAKKAKRHQEERERQKIEAEKRKKAILEEAAKVTRPPAEKKPPVVVEETIRAVPFVFKQEMPLPFVLAAAAAAAKEPETRPEPRPEPKQNGYHVKQAEPLQAEPPQNGYRLAAAQALQHEPRQASEPLQNVQPEPSKQASELVQNGYAAPQEPRRATPPPEPLRNELPKHSDLLNVSKPSEPAEPPKPSDAPREPEVAAAEAVIPEPSPAVSVEEPPRREERAASMAGIPPPPPTSSRHSPVPRREDRAEFMARSTPPAPGKDRKSLGGRMAMWRNKKNKTASMVGPPEPKELPAVVEVEAIVEPVVEDQPEPVVSEELKPTEPEPVEPEPMEVEPVVAKEVVEEVVEEVVETQEPWVPLSECSRSSSLELLAELPPPPRASEPPPPPPPPVATAPVPASMEEDEIIDIETIDEITSTSTKKPEKVEKIKKAPVVTKAALKMVGRPKKTPGRRRKKDRGASPSPSPSPPPPPETTLTPIVLPRKKQRIEKKKLTPPPPQQAPVTSHTPPPVEQLMSRKKQIMMEHSSLDHIQFKLIEIELAAKRRKAEAAAKAAAAVEQKDEKAEEVENRETPPGPSTSMRSSSLHTPNTSEEDEVIFVEPSTLEKPERRNGTTEERVMTADQRAMFDAKIEEARRSRMSTRDCSVVSTLGPVKSKASQRLHDIIEGKEELEDSMDDPTNNNGTLAGILYPMRSERAESVSSNHRSEGAGGSMSLKHHLARKNELKEEANVARRSEILKAVVKRQREIGVPTTLMSKSAIELVEEDEKERKNHKNNKTLSHPDYVRSKNEAEKAEFHGKGGTMRITNRNLKMLTRQFDLPKMSSRFRKFVRIRRHPNGMATIISCDYNQIKQHLGPNEMKHFERQFVRLGFAENNGVPLFAIGVMENAAEALHDQFEWLAKNSPNTQVKVGSLTNKQFIETMPMKKYYESAMETLDMGTFRFGPLMSLSMVGTKNEEAGGNFKEMLDALNAAPFLGPIMPWGDFSEVQGIKEDTSDDGPIFWVRPGEQMVPTDGKNRSTEPRHPLATRGNDRRETAFNDRTNAHADQVRESTEDDPTTTTTTTTTTSSSSSSSKSKKSAKSDPTFVKSTAAVGVLQGIRNPDANDDDEYYEDERKAVKEVIVFDAHDLHKVAHHLAMDLYEPPVSQCHRWVDDAILNTMRREGIRYAKLELHENDMYFLPRNVIHQFRTVSACSSVAWHVRLRHYYDVDQPASLSDPQFECDSDYSDDGDFDD

Annotated regions:
Protein sequence:
MRAPLLLESRDYLLSEQMPVAVTNRYPQETFVEHTHQFCEIVIVWRGNGLHVLNDHPYRITCGDVFYIQAADHHSYESVHDLVLDNIIYCPERLHLNAQWHKLLPPLGPEQNQGYWRLTTQGMAQARPIIQQLAQESRKTDSWSIQLTEVLLLQLAIVLKRHRYRAEQAHLLPDGEQLDLIMSALQQSLGAYFDMADFCHKNQLVERSLKQLFRQQTGMSISHYLRQIRLCHAKCLLRGSEHRISDIAARCGFEDSNYFSAVFTREAGMTPRDYRQRFIRSPVLPAKNEP

Annotated regions:
phrase: PVAVTNRYPQETFVEHTHQFCEIVIVWRGNGLHVLNDHPYRITCGDVFYIQAADHHSYESVHDLVLDNIIYCPERLHLNAQWHKLLPPLGPEQNQGYWRLTTQGMAQARPIIQQLAQESRKTDSWSIQLTEVLLLQLAIVLKRH
type: DOMAIN
name: RhaR_RhaS-like_N
description: HTH-type transcriptional activator RhaR/RhaS, N-terminal domain

phrase: YFDMADFCHKNQLVERSLKQLFRQQTGMSISHYLRQIRLCHAKCLLRGSEHRISDIAARCGFEDSNYFSAVFTREAGMTPRDY
type: DOMAIN
name: HTH_AraC
description: DNA binding HTH domain, AraC-type

phrase: ISDIAARCGFEDSNY
type: DOMAIN
name: Tscrpt_reg_AraC-type_HTH
description: Transcription regulator HTH, AraC- type, HTH domain

phrase: FSAVFTREAGMTPRDY
type: DOMAIN
name: Tscrpt_reg_AraC-type_HTH
description: Transcription regulator HTH, AraC- type, HTH domain

phrase: RLCHAKCLLRGSEHRISDIAARCGFEDSNYFSAVFTREAGMT
type: CONSERVED_SITE
name: HTH_AraC-typ_CS
description: HTH domain AraC-type, conserved site

phrase: DLIMSALQQSLGAYFDMADFCHKNQLVERSLKQLFRQQTGMSISHYLRQIRLCHAKCLLRGSEHRISDIAARCGFEDSNYFSAVFTREAGMTPRDYRQ
type: DOMAIN
name: HTH_AraC
description: DNA binding HTH domain, AraC-type

phrase: LVERSLKQLFRQQTGMSISHYLRQIRLCHAKCLLRGSEHRISDIAARCGFEDSNYFSAVFTREAGMTPRDYRQ
type: DOMAIN
name: HTH_AraC
description: DNA binding HTH domain, AraC-type

phrase: AVTNRYPQETFVEHTHQFCEIVIVWRGNGLHVLNDHPYRITCGDVFYIQAADHHSYESVHDLVLDNIIYCPERLHLNAQWHKLLPPLGPEQNQGYWRLTTQGMAQARPIIQQLAQESRK
type: DOMAIN
name: AraC-bd
description: AraC-type arabinose-binding/dimerisation domain
Protein sequence:
MKFAVIQFPGSNCDFDLLWAIRDVMGAEAEFVWHDEKSLAGFDGVLIPGGFSYGDYLRCGAIASFANIMPEIKRLAKEGKPVFGTCNGFQILVESGLLPGVLIRNEGLKFVSKWQVLKVENNQSNFTTEYAKDALINLPIAHGEGQYVADEATLAELKENGQIVFTYADENPNGSVENIAGIINKEGNVLGMMPHPERAMEELLGGADGRKMFASLLKNFLVTVKN

Annotated regions:
Protein sequence:
MAKKKTLKQQDFQKKKLKVGKPKQAASNATDTSFVAKTIHLPNQTKLTSTNDAEADLLRRLSLCKHHSEITRKETLIYLQVAVPRVIHGQVASRLMSACIPLMCDPNKHVREELLKLLDVVGSCDANTMRLYMRPLVLFMGSAMTHISAGVQRDSGRFLQCVLRHAGHELVRAAWVKMLRGLCNVLGWPLRGAASASAGAGSNVVSMHKNRALQHQNLQALADFIRLGCAEPAAAALAGCAAPALYAKYLLPDCPQPYSHLKLFVREFPADTAAAARPLHELDTLVCEDAATRRDVFLGHFRPVLAAQLPSLVKDGGDCGRVAANLLQLLDHVQQAAA

Annotated regions:
phrase: TMRLYMRPLVLFMGSAMTHISAGVQRDSGRFLQCVLRHAGHELVRAAWVKMLRGLCNVLGWPLRGAASASAGAGSNVVSMHKNRALQHQNLQALADF
type: DOMAIN
name: Ipi1_N
description: Pre-rRNA-processing protein Ipi1, N-terminal
Protein sequence:
MLLVVSPAKNLDFEKHSNAPSSSQPELLEHSQQLIDRSRKLSPAQIGSLMKISDKLAGLNADRFAAWHTPFTDENAKQAVLAFNGDVYGGLDAASFSEQDFSYAQKHMRILSGLYGLLKPLDLMQAYRLEMGTKLDTERGTNLYQFWGNIITEKLNQALAEQGDNVLVNLASSEYFTAVKPKALDGEIIEPVFKDFKNGQYKIISFYAKKARGLMARYIIQNKVSDVAKLRDFDTAGYRFSEEQSAGNKLVFLRDEQ

Annotated regions:
Protein sequence:
MGCRLLCCAVLCLLGAVPMETGVTQTPRHLVMGMTNKKSLKCEQHLGHNAMYWYKQSAKKPLELMFVYNFKEQTENNSVPSRFSPECPNSSHLFLHLHTLQPEDSALYLCASSQ

Annotated regions:
phrase: PMETGVTQTPRHLVMGMTNKKSLKCEQHLGHNAMYWYKQSAKKPLELMFVYNFKEQTENNSVPSRFSPECPNSSHLFLHLHTLQPEDSALYLCASS
type: DOMAIN
name: Ig-like_dom
description: Immunoglobulin-like domain

phrase: KKSLKCEQHLGHNAMYWYKQSAKKPLELMFVYNFKEQTENNSVPSRFSPECPNSSHLFLHLHTLQPEDSALYLCA
type: DOMAIN
name: Ig_V-set
description: Immunoglobulin V-set domain

phrase: TPRHLVMGMTNKKSLKCEQHLGHNAMYWYKQSAKKPLELMFVYNFKEQTENNSVPSRFSPECPNSSHLFLHLHTLQPEDSALYLC
type: DOMAIN
name: Ig_V-set
description: Immunoglobulin V-set domain
Protein sequence:
MLGIESSCDETGVGIVRGTTLLTNTVSSSMDEHVRFGGVIPEIASRAHLDAFVPTLQESLQEAGVTLEDIDAIAVTSGPGLAGALMVGVCAAKALAVATGKPLYAINHLVAHVGVGLLDGNRVSEGKHDAVAAAGLGAGKLPENLGALLVSGGHTEILRIRSITDDVELLGSTIDDAAGEAYDKVARILGLGYPGGPAIDKLAHQGNPKSIRFPRGLTQPKYMGTAEEKGPHRYDWSFSGLKTAVARCVEQFEARGEEVPVADIAAAFQEAVVDVISSKAVLACKEHGITDVLLGGGVAANSRLRELTGQRCASAGITLHVPPLGLCTDNGAMVAALGAQLIMAGISPSGVSFAPDSSMPVTTVSVPA

Annotated regions:
phrase: MLGIESSCDETGVGIVRGTTLLTNTVSSSMDEHVRFGGVIPEIASRAHLDAFVPTLQESLQEAGVTLEDIDAIAVTSGPGLAGALMVGVCAAKALAVATGKPLYAINHLVAHVGVGLLDGNRVSEGKHDAVAAAGLGAGKLPENLGALLVSGGHTEILRIRSITDDVELLGSTIDDAAGEAYDKVARILGLGYPGGPAIDKLAHQGNPKSIRFPRGLTQPKYMGTAEEKGPHRYDWSFSGLKTAVARCVEQFEARGEEVPVADIAAAFQEAVVDVISSKAVLACKEHGITDVLLGGGVAANSRLRELTGQRCASAGITLHVPPLGLCTDNGAMVAALGAQLIMAGIS
type: DOMAIN
name: Gcp-like_dom
description: Gcp-like domain

phrase: LLTNTVSSSMDEHVRFGGVIPEIASRAHLDAFVPTLQESLQEAGVTLEDIDAIAVTSGPGLAGALMVGVCAAKALAVATGKPLYAINHLVAHVGVGLLDGNRVSEGKHDAVAAAGLGAGKLPENLGALLVSGGHTEILRIRSITDDVELLGSTIDDAAGEAYDKVARILGLGYPGGPAIDKLAHQGNPKSIRFPRGLTQPKYMGTAEEKGPHRYDWSFSGLKTAVARCVEQFEARGEEVPVADIAAAFQEAVVDVISSKAVLACKEHGITDVLLGGGVAANSRLRELTGQRCASAGITLHVPPLGLCTDNGAMV
type: DOMAIN
name: Gcp-like_dom
description: Gcp-like domain
Protein sequence:
MAENRRNDREQSEFEERVVSINRVTKVVKGGRRLRFAALVVVGDRNGRVGFGTGKAQEVPEAIRKAIEAAKKNLITVPMVGTTLPHEALGVFGGGKILLKPAVEGAGVAAGGAVRAVLELAGVADVTSKSLGSNTPINVVRATVDGLTQLKRAEEVAALRGKSVSDFA

Annotated regions:
phrase: GRRLRFAALVVVGDRNGRVGFGTGKAQEVPEA
type: CONSERVED_SITE
name: Ribosomal_uS5_N_CS
description: Small ribosomal subunit protein uS5, N-terminal, conserved site

phrase: GVFGGGKILLKPAVEGAGVAAGGAVRAVLELAGVADVTSKSLGSNTPINVVRATVDGLTQLKRAEEVAAL
type: DOMAIN
name: Ribosomal_uS5_C
description: Small ribosomal subunit protein uS5, C-terminal

phrase: FEERVVSINRVTKVVKGGRRLRFAALVVVGDRNGRVGFGTGKAQEVPEAIRKAIEAAKKNLITV
type: DOMAIN
name: Ribosomal_uS5_N
description: Small ribosomal subunit protein uS5, N-terminal

phrase: FEERVVSINRVTKVVKGGRRLRFAALVVVGDRNGRVGFGTGKAQEVPEAIRKAIEAAKKNLIT
type: DOMAIN
name: Ribosomal_uS5_N
description: Small ribosomal subunit protein uS5, N-terminal
Protein sequence:
MSMFCFQCQETAKGTGCILSGVCGKTPEVANMQDLLLFVVRGIAVYNQALRKDGRSSARADKFIFDALFTTITNANFDKHAIIKKIKKGLELKKDLSNQVTIEHAPDECTWYGDETEFEEKAQTVGVLRTSDEDIRSLKELVHYGIKGMAAYVEHAYNLGYENPEIFAFMQYALAELTREDITVDELITLTLATGNHGVQAMAQLDTANTSHYGNPEISEVNIGVRNNPGILVSGHDLKDIEELLQQTEGTGIDIYTHSEMLPAHYYPQLKKYKHLVGNYGNAWWKQKEEFESFNGPILFTTNCIVPPRPNATYKDRIYTTGATGLEGATYIPERKDGKQKDFSVIIEHARRCQPPVAIESGKIVGGFAHAQVIALADKVVEAVKSGAIRKFFVMAGCDGRMKSRSYYTEFAEKLPADTVILTAGCAKYRYNKLPLGDINGIPRVLDAGQCNDSYSLAIIAMKLQEVFGLKDINDLPIVYNIAWYEQKAVIVLLALLALGVKKIHLGPTLPAFLSPNVKQVLIDNFGIGGISTADEDIAKFLA

Annotated regions:
Protein sequence:
MNPYIFFIIMSTVMLGTLIVMTSTHWLLVWMGFEMNMLAIIPLLMKQYNPRSMEAATKYFLTQATASMLLMLAIMINSLYSGQWTFTKLMNPTASVIMTLALTMKLGLAPFHFWVPEVTQGISLPSGLIMLTWQKIAPFSGLYTLAPIINLDLLLVVSILSVAIGGWGGLNQTQLRKIMAYSSIAHMGWMTSILVFNPTMTLLNLFLYVLMTTTTFMLLMAASTTTTLSLALMWNKMPLITTSTLAMMLSLGGLPPLTGFMPKWMIIQELTKNNNIILATLMAITALLNLFFYMRLAYTTSLTMFPTTNNMKMKWQLNTTNQTKYLPLLIIMSTMTLPLTPTMVLLN

Annotated regions:
phrase: STHWLLVWMGFEMNMLAIIPLLMKQYNPRSMEAATKYFLTQATASMLLMLAIMINSLYSGQWTFTKLMNPTASVIMTLALTMKLGLAPFHFWVPEVTQGISLPSGLIMLTWQKIAPFSGLYTLAPIINLDLLLVVSILSVAIGGWGGLNQTQLRKIMAYSSIAHMGWMTSILVFNPTMTLLNLFLYVLMTTTTFMLLMAASTTTTLSLALMWNKMPLITTSTLAMMLSLGGLPPLTGFMPKWMIIQELTKNNNIILATLMAITAL
type: DOMAIN
name: ND/Mrp_TM
description: NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domain

phrase: LFFYMRLAYTTSLTMFPTTNNMKMKWQLNTTNQTKYLPLLIIMSTMTLPLTPT
type: DOMAIN
name: NADH_DH_su2_C
description: NADH dehydrogenase subunit 2, C-terminal
Protein sequence:
MRSRRTLQNKVYNELDSTRFRNQLIPESSRSTMLELTPEVLSILKEHTEVFSKYLSCYIHALNKFIGFLRKASSLRFERTVLIKYVKKLRFINDSLIAYNFEAEFPDPNNTHLDEAVKPLASFLLKSIELLDLLNYFLTQPLQKEIISKTLNSDLNLSGECIVAIEDTYNHFVKFAQWMIESLQIENTFFQIEVVQFTRKCAIEDGVDLENTDNIFLQQVVPVTDTEEYEVIAEEWAHILADKTLQLETKFNENVINWQNKFDKKKEDK

Annotated regions:
phrase: KEHTEVFSKYLSCYIHALNKFIGFLRKASSLRFERTVLIKYVKKLRFINDSLIAYNFEAEFPDPNNTHLDEAVKPLASFLLKSIELLDLLNYFLTQPLQKEIISKTLNSDLNLSGECIVAIEDTYNHFVKFAQWMIESLQIENTFFQIEVVQFTRKCAIEDGVDLENTDNIFLQQVVPVTDTEEYEVIAEEWAHILAD
type: DOMAIN
name: RNA-bd_She2
description: RNA binding protein She2