nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTIILGIDPGSRVTGYGVIRQTGRTLEYLGSGVIRTQADDLPTRLKRIYAGVTEIITQFQPDMFAIEEVFLAKNPNSALKLGQARGTAIVAAVNRDLPVFEYAARLVKQTVVGIGSADKSQVQDMVARILKLSDKPQADAADALAIAITHAHTIRHSLHVAASAKTTETQEKLTALMRTRYSRGRFRLKV

Annotated regions:
phrase: GIGSADKSQVQDMVARILKLSDKPQADAADALAI
type: BINDING_SITE
name: X-over_junc_endoDNase_Mg_BS
description: Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site
Protein sequence:
MFHVSFRYIFGLPPLILVLLPVASSDCDIEGKDGKQYESVLMVSIDQLLDSMKEIGSNCLNNEFNFFKRHICDANKEGMFLFRAARKLRQFLKMNSTGDFDLHLLKVSEGTTILLNCTGQVKGRKPAALGEAQPTKSLEENKSLKEQKKLNDLCFLKRLLQEIKTCWNKILMGTKEH

Annotated regions:
phrase: NDLCFLKRL
type: CONSERVED_SITE
name: IL-7/IL-9_CS
description: Interleukin-7/Interleukin-9, conserved site
Protein sequence:
MAEVGEIIEGCRLPVLRRNQDNEDEWPLAEILSVKDISGRKLFYVHYIDFNKRLDEWVTHERLDLKKIQFPKKEAKTPTKNGLPGSRPGSPEREVPASAQASGKTLPIPVQITLRFNLPKEREAIPGGEPDQPLSSSSCLQPNHRSTKRKVEVVSPATPVPSETAPASVFPQNGSARRAVAAQPGRKRKSNCLGTDEDSQDSSDGIPSAPRMTGSLVSDRSHDDIVTRMKNIECIELGRHRLKPWYFSPYPQELTTLPVLYLCEFCLKYGRSLKCLQRHLTKCDLRHPPGNEIYRKGTISFFEIDGRKNKSYSQNLCLLAKCFLDHKTLYYDTDPFLFYVMTEYDCKGFHIVGYFSKEKESTEDYNVACILTLPPYQRRGYGKLLIEFSYELSKVEGKTGTPEKPLSDLGLLSYRSYWSQTILEILMGLKSESGERPQITINEISEITSIKKEDVISTLQYLNLINYYKGQYILTLSEDIVDGHERAMLKRLLRIDSKCLHFTPKDWSKRGKW

Annotated regions:
phrase: PPGNEIYRKGTISFFEIDGRKNKSYSQNLCLLAKCFLDHKTLYYDTDPFLFYVMTEYDCKGFHIVGYFSKEKESTEDYNVACILTLPPYQRRGYGKLLIEFSYELSKVEGKTGTPEKPLSDLGLLSYRSYWSQTILEILMGLKSESGERPQITINEISEITSIKKEDVISTLQYLNLINYYKG
type: DOMAIN
name: HAT_MYST-type
description: Histone acetyltransferase domain, MYST-type

phrase: TRMKNIECIELGRHRLKPWYFSPYPQELTTLPVLYLCEFCLKYGRSLKCLQRHLTKCDLRHPPGNEIYRKGTISFFEIDGRKNKSYSQNLCLLAKCFLDHKTLYYDTDPFLFYVMTEYDCKGFHIVGYFSKEKESTEDYNVACILTLPPYQRRGYGKLLIEFSYELSKVEGKTGTPEKPLSDLGLLSYRSYWSQTILEILMGLKSESGERPQITINEISEITSIKKEDVISTLQYLNLINYYKGQYILTLSEDIVDGHERAMLKRLLRIDSKCLHFT
type: DOMAIN
name: HAT_MYST-type
description: Histone acetyltransferase domain, MYST-type

phrase: IIEGCRLPVLRRNQDNEDEWPLAEILSVKDISGRKLFYVHYIDFNKRLDEWVTHERLD
type: DOMAIN
name: Tudor-knot
description: RNA binding activity-knot of a chromodomain

phrase: MKNIECIELGRHRLKPWYFSPYPQELTTLPVLYLCEFCLKYGRSLKCLQRHLTK
type: DOMAIN
name: Zf-MYST
description: MYST, zinc finger domain

phrase: EWPLAEILSVKDISGRKLFYVHYIDFNKRLDEWVTHERLDLKKIQFPKKEA
type: DOMAIN
name: Chromo/chromo_shadow_dom
description: Chromo/chromo shadow domain
Protein sequence:
MPRSLKKGPFVDGHLIKKVDVQNEAGTKNVIKTWSRRSMIVPAMLGHTIAVHNGKIHVPVFVTESMVGHKLGEFSPTRTFRGHVKDDRKSKRR

Annotated regions:
phrase: NGKIHVPVFVTESMVGHKLGEFSP
type: CONSERVED_SITE
name: Ribosomal_uS19_CS
description: Small ribosomal subunit protein uS19, conserved site
Protein sequence:
MEDKEKLIVYSNTSSVFTYSAEIRPNFKISVSQSQGFAWNQDLFATQYQQSYKVVYDAHEDNFDELILKIKGKLKTKSNKRAKMKSKTKLTRTAKQRRESPVCERDESDEDNDSDHYQRIQVLDGHEFPRANRYKSVWAHDVHSNEDSTSDGESNHDIDMIGGTGTSYAGAAIMDRPRRKSERSISFVEDSKTGDYRYQTGQVDVVEVDSDTPENNHLKWLIK

Annotated regions:
Protein sequence:
MPSLSTPPSQNLAFSPAASATSSRLTPSSKRSFYPHRLPDPTALCRCSSSSGSNSSSSSSSDDNPRWDSAIQDVLKSAIKRFDSVLSWYATLDNDDGEQGSENVEKIDDDWDWDRWKKHFDQVDDQDRLLSVLKSQLNRAIKREDYEDAARLKVAIAATATNDAVGKVMSTFYRALLEERYKDAVYLRDKAGAGLVGWWSGISEDVKDPFGLIVQITAEHGRYVARSYNPRQLSTSAAGAPLFEIFLTLDGKGNYKKQAVYLKWKEIFPDVPTMPSRTLTPGRFLTSPGRKEDTGNLAVESSEDEESDNSDDDSDLLEESSGFQSFLRDMIPGVKVKVMKVTAPGRVDKDFISKVIEQIADEEDEENDLDIEDIDVEDDTKAEIDEKNADIELESVTDEIIDNNGGREIAVKFVIGDIVDRLSGNQPLKESLRSPANLESVENSSFYLRLEKDLNVKESKGVEGTTLVDGKGSRQSRRRIENIMGDLAKSIEKEKKISVKMLKDVGELLSLTLSQAQNRQQLSGLTKFRRIDVTPSLDPLDGLYIGAHGLYTSEVIHLKRKFGQWKGGKESKKPTDIEFYEYVEAVKLTGDPYVPAGKVAFRAKIGRRYELPHKGLIPEEFGVIARYKGQGRLADPGFRNPRWVDGELVILDGKYVKGGPVVGFVYWAPEYHFVMFFNRLRLQA

Annotated regions:
phrase: DRLLSVLKSQLNRAIKREDYEDAARL
type: DOMAIN
name: UVR_dom
description: UVR domain
Protein sequence:
MAFSTLKSDRERGFLDGHFLIAMPGMADGNFTRSVVYVCAHTTAGAMGFIINRTQPVKFADILLHLDLIDQNDAIMLPDHARNFPIQCGGPVETGRGFVLHSDDYLSDSSIPVSDDISLTATLDIVRAISDGRGPARATMLLGYAGWGPGQLEAEIANNGWLNCPASEDLIFDPVLDNKYDRALALIGISPATLSAEAGHA

Annotated regions:
Protein sequence:
MQPFTTHTGLAVMIDSTNIDTDQIIPKQFLSKVTRDGFGVHLFHDWRYLDDAGDQPNPEFSLNQSRYRGASILLAQENFGCGSSREHAPWALADFGLRAIIAQSFADIFYGNSINNGLLPVALTHAQVRQLMDEVAAEAGAQITVDLTSCKVVSPSGAEFSFTLAESARHKLLNGLDAIGLTLSHAAQIGQYETQIQGWRR

Annotated regions:
phrase: MQPFTTHTGLAVMIDSTNIDTDQIIPKQFLSKVTRDGFGVHLFHDWRYLDDAGDQPNPEFSLNQSRYRGASILLAQENFGCGSSREHAPWALADFGLRAIIAQSFADIFYGNSINNGLLPVAL
type: DOMAIN
name: AconitaseA/IPMdHydase_ssu_swvl
description: Aconitase A/isopropylmalate dehydratase small subunit, swivel domain

phrase: NIDTDQIIPKQFLSKVTRDGFGVHLFHDWRYLDDAGDQPNPEFSLNQSRYRGASILLAQENFGCGSSREHAPWALADFGLRAIIAQSFADIFYGNSINNGLLPVALTHAQVRQLMDEVAAEAGAQITVD
type: DOMAIN
name: IPMI_Swivel
description: 3-isopropylmalate dehydratase, swivel domain
Protein sequence:
MTDVTPANAARIGIGGPVGSGKTALIERLIPVLQARGVDLAVITNDLVTKEDAERLRRSGLIDPSRVEAVEAGACPHTVIREDPTLNIAAGDALEARFPGLQLLVFESGGDNLASTFSLDLVDWWIFVIDVAGGDDIPRKRGPGVLRCDLLVINKIDLAPHVGVDLEGMLAEAARVRGGKPVIATNARAGLGIDRVADAIGRAVLFTP

Annotated regions:
phrase: IGIGGPVGSGKTALIERLIPVLQARGVDLAVITNDLVTKEDAERLRRSGLIDPSRVEAVEAGACPHTVIREDPTLNIAAGDALEARFPGLQLLVFESGGDNLASTFSLDLVDWWIFVIDVAGGDDIPRKRGPGVLRCDLLVINKIDLAPHVGVDLEGMLAEAARVRGGKPV
type: DOMAIN
name: CobW/HypB/UreG_nucleotide-bd
description: CobW/HypB/UreG, nucleotide-binding domain
Protein sequence:
MNRFAVVLAAGQGTRMKSKLYKVLHPVCGKPMVEHVVDQLEKLKLENIVTVVGHGAEKVRDQLGAQVEYVLQEEQLGTAHAVMQTQDALSDKDGVTLVVCGDTPLITSETMDSLLSYHEEQGAKATILTAKADNPFGYGRIIRDENGSVQRIVEQKDANESEQQVTEINTGTYCFDNKTLFETLQLVKNENAQGEYYLPDVVEILQKQGEVVGAYQTADFDETMGVNDRVALSKAEIAMKKRINEKHMRNGVTLIDPNQTYISPEAVIGQDTIIYPGSTISGKTIIGNEAHIGPNSEIKDSIVGDMSVVKQSVIHDSEVGNAVNIGPYAHVRPSSQIGDDVKIGNFVEVKKAVMGQGSKASHLSYVGDAEIGKNVNLGCGSITVNYDGKNKYLTKVEDGAFIGCNVNLIAPVTVGKGATVAAGSTITDNVPEQALSIARSRQTNKEDYASKMKDK

Annotated regions:
phrase: TKVEDGAFIGCNVNLIAPVTVGKGATVAAGSTI
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: SEVGNAVNIGPYAHVRPSSQIGDDVKIGNFVEV
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: AVIGQDTIIYPGSTISGKTIIGNEAHIGPNSEI
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: IGCNVNLIAPVTVGKGATVAAGSTITDN
type: CONSERVED_SITE
name: Hexapep_transf_CS
description: Hexapeptide transferase, conserved site

phrase: GVTLIDPNQTYISPEAVIGQDTIIYPGSTISGKTIIGNEAHIGPNSEIKDSIVGDMSVVKQSVIHDSEVGNAVNIGPYAHVRPSSQIGDDVKIGNFVEVKKAVMGQGSKASHLSYVGDAEIGKNVNLGCGSITVNYDGKNKYLTKVEDGAFIGCNVNLIAPVTVGKGATVAAGSTITDNVPEQALSIARSR
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain

phrase: AVVLAAGQGTRMKSKLYKVLHPVCGKPMVEHVVDQLEKLKLENIVTVVGHGAEKVRDQLGAQVEYVLQEEQLGTAHAVMQTQDALSDKDGVTLVVCGDTPLITSETMDSLLSYHEEQGAKATILTAKADNPFGYGRIIRDENGSVQRIVEQKDANESEQQVTEINTGTYCFDNKTLFETLQLVKNENAQGEYYLPDVVEILQKQGEVVGAYQ
type: DOMAIN
name: NTP_transferase_dom
description: Nucleotidyl transferase domain
Protein sequence:
MSWGTELWDQFDNLEKHTQWGIDFLDKYAKFVKERLEIEQNYAKQLRNLVKKYCPKRSAKDEEPRFTSCLSFYNILNELNDYAGQREVVAEEMGHRVYAEIMRYSNDIKGERKSHLQEGRKAQQYLDMCLKQMDNSKRKFERECREAEKAQQTYERLDNDSNATKSDVEKAKQQLHLRTHMADESKNEYAAQLQNYNAEQHKHFYIVIPQVYKHLQEMDERRTVKLSECYKGFADAERKVIPIISKCLEGMVQAAKSVDERRDSQIVVDCFKSGFEPNGDYPFEDYSQHIYRTVSDGTISTPKQESLKPDPRVTVGKAKGKLWLFGKKPKGPALEDFSHLPPEQRRKRLQQRIDELSRELQKEMDQKDALNKMKDVYEKNPQMGDPSSLHPKIAETTSNIERLRMEIHKNEAWLSEVEGKVSQRSERRHSAEANHLVAQGRESPEGSYTEDANQEGRVQPQPHAHPEFDDEFDDDEPLPAIGHCKSLYPFDGNNEGTLAMKEGEVLYIIEEDKGDGWTRARKQNGEEGYVPTSYIDITLEKNSKGAVTYI

Annotated regions:
phrase: TELWDQFDNLEKHTQWGIDFLDKYAKFVKERLEIEQNYAKQLRNLVKKYCPKRSAKDEEPRFTSCLSFYNILNELNDYAGQREVVAEEMGHRVYAEIMRYSNDIKGERKSHLQEGRKAQQYLDMCLKQMDNSKRKFERECREAEKAQQTYERLDNDSNATKSDVEKAKQQLHLRTHMADESKNEYAAQLQNYNAEQHKHFYIVIPQVYKHLQEMDERRTVKLSECYKGFADAERKVIPIISKCLEGMVQAA
type: DOMAIN
name: FNBP1L_F-BAR
description: FNBP1L, F-BAR domain

phrase: MSWGTELWDQFDNLEKHTQWGIDFLDKYAKFVKERLEIEQNYAKQLRNLVKKYCPKRSAKDEEPRFTSCLSFYNILNELNDYAGQREVVAEEMGHRVYAEIMRYSNDIKGERKSHLQEGRKAQQYLDMCLKQMDNSKRKFERECREAEKAQQTYERLDNDSNATKSDVEKAKQQLHLRTHMADESKNEYAAQLQNYNAEQHKHFYIVIPQVYKHLQEMDERRTVKLSECYKGFADAERKVIPIISKCLEGMVQAAKSVDERR
type: DOMAIN
name: F_BAR
description: F-BAR domain

phrase: QFDNLEKHTQWGIDFLDKYAKFVKERLEIEQNYAKQLRNLVKKYCPKRSAKDEEPRFTSCLSFYNILNELNDYAGQR
type: DOMAIN
name: FCH_dom
description: FCH domain

phrase: GHCKSLYPFDGNNEGTLAMKEGEVLYIIEEDKGDGWTRARKQNGEEGYVPTSYIDI
type: DOMAIN
name: FNBP1L_SH3
description: FNBP1L, SH3 domain

phrase: GHCKSLYPFDGNNEGTLAMKEGEVLYIIEEDKGDGWTRARKQNGEEGYVPTSYIDIT
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: PAIGHCKSLYPFDGNNEGTLAMKEGEVLYIIEEDKGDGWTRARKQNGEEGYVPTSYIDITL
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: HLPPEQRRKRLQQRIDELSRELQKEMDQKDALNKMKDVYEKNPQMGDPSSLHPKIAETTSNIERLRMEIHKNEAWLS
type: DOMAIN
name: HR1_rho-bd
description: HR1 rho-binding domain

phrase: LYPFDGNNEGTLAMKEGEVLYIIEEDKGDGWTRARKQNGEEGYVP
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: MSWGTELWDQFDNLEKHTQWGIDFLDKYAKFVKERLEIEQNYAKQLRNLVKKYCPKRSAKDEEPRFTSCLSFYNILNELNDYAGQREVVAEE
type: DOMAIN
name: FCH_dom
description: FCH domain
Protein sequence:
MFLMVEKKPVPEDWPHIVGDYVVGDEESPVAVVTLGSHMEDEPVKAGAAISGPLHTENLGIEKVVGNVIANPNLRFLVVCGAEVMGHITGQTMKALHSNGVDLETGRIIGATGAIPYIENMPEEAIERFRRQVELVDMVDVEDPDSIAARIQECVVHDSGAMEEEPLILKVPEIGKGDSEENT

Annotated regions:
Protein sequence:
MDWEEVTKLEENEYKRGYDEGILKGIEQGYEEAFLFGLEHAYNKYLLAGEIYGRVCFWLKEENSQHPKIKKAHRHLEQLKSLLESLPTNNELEETDAGFDSYWNKITAKAKVVSSLLGTKILPAEKIDANDGFE

Annotated regions:
phrase: GYDEGILKGIEQGYEEAFLFGLEHAYNKYLLAGEIYGR
type: DOMAIN
name: Essential_protein_Yae1_N
description: Essential protein Yae1, N-terminal
Protein sequence:
MAHKKGQGSTQNNRDSAGRRLGVKKFGGEFVRAGNIIIRQRGTKVHPGNNVGLGKDHTIYALIDGYVKFEIKDKQRKKVSVYPIENN

Annotated regions:
phrase: GNIIIRQRGTKVHP
type: CONSERVED_SITE
name: Ribosomal_bL27_CS
description: Large ribosomal subunit protein bL27, conserved site
Protein sequence:
MEIFESFGIEGEVTKQWEPATDEILWCRNESGTLSRMERFRNEPPVGVKWTHGTLQQGRVEEIMKKRITEISGVEVEYSTELSDLTINTRESSNSKASACSVTIRSVADDQEAHRSSETIRARYIIGADGGRSSIRDLMGVAMEGTKGTAIWGVMDILGGSDFPDFGATSVVRSDSDGAVDFVRREEGLTRIYVELNKCAAGWEALERDTITPELILEKCRYIIRPYKLEVDYVEWWSSFTVWQRLSKSMIVHDRVFLVGDAVHTHSPLCGMGMNTGIQDSFNLGWKLAGVVQGQLNYDILQTYETERRPVAEALLDTDRTVLDLFHAPLGPEAEALLAKVPALQVYLGGRGICYHESVLTCRLAQTLGDLTAGECLPDVTVFDYATGRPSSTHSWIKGNGGWAIIVWAGDVSRPSQMNLVQSLSRDMIELRDSLGKSGSMIDFFLIHCSAWPSVELADFPPLFFPTTKTIGRPNGRIFVDEKAVYDGLHISRAEGGVAIVRPDKHIAWAGGLQEVDSLQRYLRQVFRPQPE

Annotated regions:
phrase: YHESVLTCRLAQTLGDLTAGECLPDVTVFDYATGRPSSTHSWIKGNGGWAIIVWAGDVSRPSQMNLVQSLSRDMIELRDSLGKSGSMIDFFLIHCSAWPSVELADFPPLFFPTTKTIGRPNGRIFVDEKAVYDGLHISRAEGGVAIVRPDKHIAWAGGLQEVDSLQRYLRQVFRP
type: DOMAIN
name: Phe_hydrox_C_dim_dom
description: Phenol hydroxylase-like, C-terminal dimerisation domain

phrase: MEIFESFGIEGEVTKQWEPATDEILWCRNESGTLSRMERFRNEPPVGVKWTHGTLQQGRVEEIMKKRITEISGVEVEYSTELSDLTINTRESSNSKASACSVTIRSVADDQEAHRSSETIRARYIIGADGGRSSIRDLMGVAMEGTKGTAIWGVMDILGGSDFPDFGATSVVRSDSDGAVDFVRREEGLTRIYVELNKCAAGWEALERDTITPELILEKCRYIIRPYKLEVDYVEWWSSFTVWQRLSKSMIVHDRVFLVGDAVHTHSPLCGMGMNTGIQDSFNLGWKLAGVVQGQLNYDILQTYETERRPVAEALL
type: DOMAIN
name: FAD-bd
description: FAD-binding domain
Protein sequence:
MSEPEVTYSTVRLHKSSGLQKLVRHEETQGPREVGNRKCSAPWQLIVKALGILCFLLLVTVAVLAVKIFQYNQHKQEINETLNHHHNCSNMQRAFNLKEEMLTNKSIDCRPSNETLEYIKREQDRWDSKTKTVLDSSRDTGRGVKYWFCYSTKCYYFIMNKTTWSGCKANCQHYSVPILKIEDEDELKFLQRHVIPENYWIGLSYDKKKKEWAWIDNGPSKLDMKIRKMNFKSRGCVFLSKARIEDIDCNIPYYCICGKKLDKFPD

Annotated regions:
phrase: KTTWSGCKANCQHYSVPILKIEDEDELKFLQRHVIPENYWIGLSYDKKKKEWAWIDNGPSKLDMKIRKMNFKSRGCVFLSKARIEDIDCNIPYYCIC
type: DOMAIN
name: C-type_lectin-like
description: C-type lectin-like

phrase: KYWFCYSTKCYYFIMNKTTWSGCKANCQHYSVPILKIEDEDELKFLQRHVIPENYWIGLSYDKKKKEWAWIDNGPSKLDMKIRKMNFKSRGCVFLSKARIEDIDCNIPYYCICG
type: DOMAIN
name: NKR-like_CTLD
description: Natural killer cell receptor-like, C-type lectin-like domain

phrase: GVKYWFCYSTKCYYFIMNKTTWSGCKANCQHYSVPILKIEDEDELKFLQRHVIPENYWIGLSYDKKKKEWAWIDNGPSKLDMKIRKMNFKSRGCVFLSKARIEDIDCNIPYYCIC
type: DOMAIN
name: C-type_lectin-like
description: C-type lectin-like

phrase: SAPWQLIVKALGILCFLLLVTVAVLAVKIFQYNQHKQEINETLNHHHNCSNMQRAFNLKEEMLTNKSIDCRPSNETLEYIKREQDRWDSKTKTVLDSSRDTGRGVKYWFCYSTKCYY
type: DOMAIN
name: Ly49_N
description: Ly49-like, N-terminal

phrase: YSTKCYYFIMNKTTWSGCKANCQHYSVPILKIEDEDELKFLQRHVIPENYWIGLSYDKKKKEWAWIDNGPSKLDMKIRKMNFKSRGCVFLSKARIEDIDCNIPYYCIC
type: DOMAIN
name: C-type_lectin-like
description: C-type lectin-like
Protein sequence:
MTDLPFTLDQLRILRAILIQGSFKKAATSLYISQPAVSSHVHNIEKQLNIQLFDRSHRNAQLTEAGQLLLKYGGRILALCEETCRALEDLQNLQCGNLIIGASQTTGTYLMPKLIGLFRQKYPQISVQLQVHSTRRISWSVANGQLDLAIIGGEVPKELTEILEVRNFVEDELTLILPPSHPFSKFSCIQKEDLYRLRFIALDKNSTIRKVIDKILNRNGIDSSRLKTEMELSSIEAIKNAVQSGLGASFVSISAIDKELKLQLLNRVNIDKIKIKRMLSIITNYSRYRSKASETFCHEILGLLVNLPFKNAPSTEK

Annotated regions:
phrase: FKKAATSLYIS
type: DOMAIN
name: Tscrpt_reg_HTH_LysR
description: Transcription regulator HTH, LysR

phrase: QPAVSSHVHN
type: DOMAIN
name: Tscrpt_reg_HTH_LysR
description: Transcription regulator HTH, LysR

phrase: IEKQLNIQLFD
type: DOMAIN
name: Tscrpt_reg_HTH_LysR
description: Transcription regulator HTH, LysR

phrase: LQCGNLIIGASQTTGTYLMPKLIGLFRQKYPQISVQLQVHSTRRISWSVANGQLDLAIIGGEVPKELTEILEVRNFVEDELTLILPPSHPFSKFSCIQKEDLYRLRFIALDKNSTIRKVIDKILNRNGIDSSRLKTEMELSSIEAIKNAVQSGLGASFVSISAIDKELKLQLLNRVNIDKIKIKRMLSIITNYSRYRSKASETFCHE
type: DOMAIN
name: LysR_subst-bd
description: LysR, substrate-binding

phrase: FTLDQLRILRAILIQGSFKKAATSLYISQPAVSSHVHNIEKQLNIQLFDRSHRNAQL
type: DOMAIN
name: Tscrpt_reg_HTH_LysR
description: Transcription regulator HTH, LysR

phrase: LDQLRILRAILIQGSFKKAATSLYISQPAVSSHVHNIEKQLNIQLFDRSHRNAQLTEAG
type: DOMAIN
name: Tscrpt_reg_HTH_LysR
description: Transcription regulator HTH, LysR
Protein sequence:
MTDLIDATDRRILHELCANARIPVTELARKVGLSKTPVAARIRAMEEMGLITGYRAMLSPIRLGLIHVTYVEVRLNDTRQKALEQFNAAVREIPEVEECYMIAGGFDYLLKVRSHDIAEYRKIMGEKLSALPHVAATSSYVAMEAVVEQNSPSL

Annotated regions:
phrase: IDATDRRILHELCANA
type: DOMAIN
name: AsnC-type_HTH_dom
description: AsnC-type HTH domain

phrase: RIPVTELARKV
type: DOMAIN
name: AsnC-type_HTH_dom
description: AsnC-type HTH domain

phrase: GLSKTPVAARIRAMEEMGL
type: DOMAIN
name: AsnC-type_HTH_dom
description: AsnC-type HTH domain

phrase: IDATDRRILHELCANARIPVTELARKVGLSKTPVAARIRAMEEMGLITGYRAMLSPIRLGL
type: DOMAIN
name: AsnC-type_HTH_dom
description: AsnC-type HTH domain

phrase: PVTELARKVGLSKTPVAARIRAMEEM
type: CONSERVED_SITE
name: Tscrpt_reg_HTH_AsnC-type_CS
description: Transcription regulator HTH, AsnC-type, conserved site

phrase: IDATDRRILHELCANARIPVTELARKVGLSKTPVAARIRAM
type: DOMAIN
name: AsnC-type_HTH_dom
description: AsnC-type HTH domain

phrase: VEVRLNDTRQKALEQFNAAVREIPEVEECYMIAGGFDYLLKVRSHDIAEYRKIMGEKLSALPHVAATSSYVAM
type: DOMAIN
name: Tscrpt_reg_AsnC/Lrp_C
description: Transcription regulator AsnC/Lrp, ligand binding domain

phrase: LIDATDRRILHELCANARIPVTELARKVGLSKTPVAARIRAMEEMGLITGYR
type: DOMAIN
name: ArsR-like_HTH
description: ArsR-like helix-turn-helix domain
Protein sequence:
MDTGVTSPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRRRGSTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGGGPRLLHTVRGVGFVLRMQ

Annotated regions:
phrase: SETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGGGPRLLHTVRGVGFVLR
type: DOMAIN
name: OmpR/PhoB-type_DNA-bd
description: OmpR/PhoB-type DNA-binding domain

phrase: VLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARV
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: DVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGGGPRLLHTVRGVGFV
type: DOMAIN
name: OmpR/PhoB-type_DNA-bd
description: OmpR/PhoB-type DNA-binding domain

phrase: PRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVAR
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: LEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGGGPRLLHTVRGVGFV
type: DOMAIN
name: OmpR/PhoB-type_DNA-bd
description: OmpR/PhoB-type DNA-binding domain

phrase: RVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKAL
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: GVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAADTNVVDVFIGYLRRKLEAGGGPRLLHTVRGVGFV
type: DOMAIN
name: OmpR/PhoB-type_DNA-bd
description: OmpR/PhoB-type DNA-binding domain
Protein sequence:
MTQYTLKQASVLLQSKQISAVELASAYLAAIAEKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASKMLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNLEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQTGPMAQTAEDCAILLNAMAGFDPKDSTSLEREKEDYTRDLNQPLKGLKIGLPKEYFGEGNSADVLTALQNTIDLLKAQGAELIEVSLPQTKLSIPAYYVLASAEASTNLSRYDGVRYGHRAAQFADLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGYYDAYYLKAQKLRRLVADDFQTAFARCDLILAPTAPTAAPKIGADASPVETYLSDIYTIAVNLAGLPALTLPAGFSGGGLPVGVQLVGNYFAEAKILGAAHQIQLNSDWHGKRPE

Annotated regions:
phrase: GGSSGGSAAVVAARLAPAALGSDTGGSIRQP
type: CONSERVED_SITE
name: Amidase_CS
description: Amidase, conserved site

phrase: ELASAYLAAIAEKNPALNGYITIDQDKTLAEARAADERIAQGNASALTGVPVAYKDIFCQTGWRSACASKMLDNFISPYTATVVQNLLDEGMVTLGRTNMDEFAMGSTNENSFYGAAKNPWNLEHVPGGSSGGSAAVVAARLAPAALGSDTGGSIRQPASHCGITGIKPTYGTVSRFGMVAYASSFDQTGPMAQTAEDCAILLNAMAGFDPKDSTSLEREKEDYTRDLNQPLKGLKIGLPKEYFGEGNSADVLTALQNTIDLLKAQGAELIEVSLPQTKLSIPAYYVLASAEASTNLSRYDGVRYGHRAAQFADLEEMYGKTRAEGFGSEVKRRIMIGTYVLSHGYYDAYYLKAQKLRRLVADDFQTAFARCDLILAPTAPTAAPKIGADASPVETYLSDIYTIAVNLAGLPALTLPAGFSGGGLPVGVQLVGNYFAEAKI
type: DOMAIN
name: Amidase_dom
description: Amidase signature domain
Protein sequence:
MSDIQLNTLKPAEGSKHAKRRVGRGIGSGLGKTAGRGHKGQKSRSGGFHKVGFEGGQMPLQRRLPKRGFTPLGQHLYAEVRLSELQLMEAEEIDVQALKAAGVVGQSVRYAKVIKSGELSRKVVLRGITATAGARAAIEAAGGSLA

Annotated regions:
phrase: VRLSELQLMEAEEIDVQALKAAGVVGQSVRYAKVIKSGELSRKVVLRGITATAGARAAIEAAGG
type: DOMAIN
name: Ribosomal_uL15/eL18
description: Large ribosomal subunit protein uL15/eL18
Protein sequence:
MAPLHHILVLCVGFLTTATAEAPQEHDPFTYDYQSLRIGGLIIAGILFILGILIVLSRRCRCKFNQQQRTGEPDEEEGTFRSSIRRLSTRRR

Annotated regions:
phrase: DPFTYDYQSLRIG
type: CONSERVED_SITE
name: FXYD_motif
description: Ion-transport regulator, FXYD motif
Protein sequence:
MSKTYHFIGIKGSGMSALALMLHQMGYKVQGSDVEKYYFTQRGLEQAGIPILPFDEKNITEDVELIAGNAFREDNNVEIAYAIKNGYKFKRYHEFLGHFMNQFTSFGVAGAHGKTSTTGLLSHSMKNITDTSYLIGDGTGRGSANAQYFVFEADEYERHFMPYHPAYSIITNIDFDHPDYFTSIDDVFSAFDDYAKQVQKGLFVYGEDSNLRKITSNAPIYYYGFEENDDFMATDIIRTTTGSNFKVKHDGQIIGEFHVPAYGRHNILNATAVIANLYVAGFDMALVAEHLKTFSGVKRRFTEKIISDTVIIDDFAHHPTEIIATLDAARQKYPSKEIVAIFQPHTFTRTIALLDDFAEALNEADAVYLAQIYGSAREVDHGDVKVEDLAAKINKPAKVVTVENVSPLLDHDNAIYVFMGAGDIQLYERSFEELLASLQTHM

Annotated regions:
phrase: SDTVIIDDFAHHPTEIIATLDAARQKYPSKEIVAIFQPHTFTRTIALLDDFAEALNEADAVYLAQIYGSAREVDHGDVKVEDLAAKINKPAKVVTVENVSPLL
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: VAGAHGKTSTTGLLSHSMKNITDTSYLIGDGTGRGSANAQYFVFEADEYERHFMPYHPAYSIITNIDFDHPDYFTSIDDVFSAFDDYAKQVQKGLFVYGEDSNLRKITSNAPIYYYGFEENDDFMATDIIRTTTGSNFKVKHDGQIIGEFHVPAYGRHNILNATAVI
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: TYHFIGIKGSGMSALALMLHQMGYKVQGSDVEKYYFTQRGLEQAGIPILPFDEKNITEDVELIAGNAFREDNNVEIAYAIKNGYKFKRYHEFLGHFMNQ
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain
Protein sequence:
MEWSEPAIVLSVAAFGESDLRTIVLAETHGAWHGLARGGAGRRGAPIWQEGNLINARWVARLPEQLGSISGELVHPAAAIAMADPLALAVLRAACAVAAGALPEREAHRGAFIRLARLLGGIGIAGTALPALVRFELELLRELGYGLDLSSCALSGAAEDLAFVSPRTGRAVARGAAGDWVPRLLKLPAFLLDEDAADDKADLAACRDGLALTGHFLARDAFGARHAPLPTARLDLYDRLTRRLNGDDDAR

Annotated regions:
phrase: MEWSEPAIVLSVAAFGESDLRTIVLAETHGAWHGLARGGAGRRGAPIWQEGNLINARWVARLPEQLGSISGELVH
type: DOMAIN
name: DNA_rep/recomb_RecO_N
description: DNA replication/recombination mediator RecO, N-terminal
Protein sequence:
MLSDIEISRQSPRLPIHALAERLAIPSHQLHPYGHYKGKLSLELLKSLPKPAGKLVLVSAITPTPLGEGKTVTTLGLSMGLNHIGQPSIATIRQPSLGPVFGVKGGAAGGGHAQVVPMEEMNLHLTGDFHALTAAHNLAAAALDARLFHERKLGDQFSARTGLQRLDIDADNILWPRTLDMNDRALRHLTIGQGNAADGVERSDRFVITAASELMAILALASDLKDLRQRIGRIQLARDLRGKPITAEQLEVAGAMTVLLKEALQPTLMQTTEQTSVLVHAGPFANIAHGNSSVIADRMALGLTDYVVTEAGFGSDMGLEKFFNIKHRQSGITPACVVLVATVRGLKANSGLLDIRPGQPLPESLLREDLPTLEQGCANLGWHIANARRYGVPVVVAINRFPTDSEAELALLARAALRAGACGSAISSAFTQGGAGASELAQAVVAACEQPGKVKLLYPDQASLGAKLATLVECGYGGRGVQLSDKARQQLAQLSAEGWDHLPVCVAKTPLSISHDPALKGVPTDFEVPIEEVKLCAGAGFVYALAGPIMTMPGLGSLPAYRHIDIDDNGEIVGLS

Annotated regions:
phrase: VATVRGLKANS
type: CONSERVED_SITE
name: Formate_THF_ligase_CS
description: Formate-tetrahydrofolate ligase, FTHFS, conserved site

phrase: GVKGGAAGGG
type: CONSERVED_SITE
name: Formate_THF_ligase_CS
description: Formate-tetrahydrofolate ligase, FTHFS, conserved site
Protein sequence:
MINVQNVSKTFILHQQNGVRLPVLNRASLTVNAGECVVLHGHSGSGKSTLLRSLYANYLPDEGQIQIKHGDEWVDLVTAPARKVVEIRKTTVGWVSQFLRVIPRISALEVVMQPLLDTGVPREACAAKAARLLTRLNVPERLWHLAPSTFSGGEQQRVNIARGFIVDYPILLLDEPTASLDAKNSAAVVELIREAKTRGAAIVGIFHDEAVRNDVADRLHPMGASS

Annotated regions:
phrase: LNRASLTVNAGECVVLHGHSGSGKSTLLRSLYANYLPDEGQIQIKHGDEWVDLVTAPARKVVEIRKTTVGWVSQFLRVIPRISALEVVMQPLLDTGVPREACAAKAARLLTRLNVPERLWHLAPSTFSGGEQQRVNIARGFIVDYPILLLDEPT
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: FSGGEQQRVNIARG
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: AGECVVLHGHSGSGKSTLLRSLYANYLPDEGQIQIKHGDEWVDLVTAPARKVVEIRKTTVGWVSQFLRVIPRISALEVVMQPLLDTGVPREACAAKAARLLTRLNVPERLWHLAPSTFSGGEQQRVNIARGFIVDYPILLLDEPTASLDAKNSAAVVELIREAKTRGAAIVGIFHDEAVRNDVADRLHPMGAS
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: INVQNVSKTFILHQQNGVRLPVLNRASLTVNAGECVVLHGHSGSGKSTLLRSLYANYLPDEGQIQIKHGDEWVDLVTAPARKVVEIRKTTVGWVSQFLRVIPRISALEVVMQPLLDTGVPREACAAKAARLLTRLNVPERLWHLAPSTFSGGEQQRVNIARGFIVDYPILLLDEPTASLDAKNSAAVVELIREAKTRGAAIVGIFHDEAVRNDVADRLHPMGAS
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain
Protein sequence:
MANSEADKLFKEFKIQSVSEFFRRNAAMLGYTGKLRSLTTLIHEAVTNSLDACEEAGILPYVRVEIEELGTEHYKIIVEDNGPGIPEKFIAHVFGKMLAGTKAHRNIQSRGQQGIGISGAVMFAQITSGKATRIITSTGEEEIIEAWVGIDVDKNEGKIFKKIKHPNPTGWRGTRIEMEVKDVRYIRSKQGVYWYLKLTAIANPHAHIEFIEPDGKLIVFSRSSEELPEPPEEMKPHPKGIITDDIYRMAQRTTRTTVRTFLIGEFSRISDKKIDELVQYITALRLIKEEEEQNVKEQLMKRLVDGEVDKIIASFGKRGKKVLREVRKIMEKPPKKLTWHEAEEIVEAFKYMTFLAPPTHGLRPIGEENIEKGLTGILRPEFVTSVTRPPKVYRGGIPFQVEVGLAFGGELSSGFDLLRYANRVPLLFDAGSCVITSAARNIDWKRYRVDDVDRAPLALLVNVVSVHVPYTSTGKQSVANEEEIYEEIRLAVMDVARRLAKYLGGKHRKLYQVKRRKTLEKYVPEVSRALSILTGLPEGEIKKMLVTIIEKKFESIDEAVEAESDA

Annotated regions:
phrase: GKLRSLTTLIHEAVTNSLDACEEAGILPYVRVEIEELGTEHYKIIVEDNGPGIPEKFIAHVFGKMLAGTKAHRNIQSRGQQGIGISGAVMFAQITSGKATRIITSTGEEEIIEAWVGIDVDKNEGKIFKKIKHPNPTGWRGTRIEMEVKDV
type: DOMAIN
name: HATPase_dom
description: Histidine kinase/HSP90-like ATPase domain

phrase: GEENIEKGLTGILRPEFVTSVTRPPKVYRGGIPFQVEVGLAFGGELSSGFDLLRYANRVPLLFDAGSCVITSAARNIDWKRYRVDDVDRAPLALLVNVVSVHVPYTSTGKQSVANEEEIYEEIRLAVMDVARRLAKYLGGKHRKLYQVK
type: DOMAIN
name: TopoVI_B_transducer
description: DNA topoisomerase VI, subunit B, transducer

phrase: RSLTTLIHEAVTNSLDACEEAGILPYVRVEIEELGTEHYKIIVEDNGPGIPEKFIAHVFGKMLAGTKAHRNIQSRGQQGIGISGAVMFAQITSGKAT
type: DOMAIN
name: HATPase_dom
description: Histidine kinase/HSP90-like ATPase domain

phrase: PPTHGLRPIGEENIEKGLTGILRPEFVTSVTRPPKVYRGGIPFQVEVGLAFGGELSSGFDLLRYANRVPLLFDAGSCVITSAARNIDWKRYRVDDVDRAPLALLVNVVSVHVPYTSTGKQSVANEEEIYEEIRLAVMDVARRLAKYLGGKHRK
type: DOMAIN
name: TopoVI_B_transducer
description: DNA topoisomerase VI, subunit B, transducer