nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDEKRKEILEANKIDVEKARERGVKESLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVLAIKEALRETEVPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQRPGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEKTREIVPDVVPATEEDWPTEYLDLIIAIKVVRDVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGNYHVRE

Annotated regions:
phrase: REAWDVLRNATTREKNKAIKKIAEKLDEKRKEILEANKIDVEKARERGVKESLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVLAIKEALRETEVPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQRPGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEKTREIVPDVVPATEEDWPTEYLDLIIAIKVVRDVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTY
type: DOMAIN
name: GPR_dom
description: GPR domain

phrase: IIAIKVVRDVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQF
type: DOMAIN
name: Aldehyde_DH_dom
description: Aldehyde dehydrogenase domain

phrase: LLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDEKRKEILEANKIDVEKARERGVKESLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVLAIKEALRETEVPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQRPGTCNAAEKLLVHEKIAKEFLPVIVEELRKH
type: DOMAIN
name: Aldehyde_DH_dom
description: Aldehyde dehydrogenase domain

phrase: ELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDEKRKEILEANKIDVEKARERGVKESLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVLAIKEALRETEVPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQRPGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEKTREIVPDVVPATEEDWPTEYLDLIIAIKVVRDVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGNYHV
type: DOMAIN
name: GPR_dom
description: GPR domain

phrase: EKAKKVREAWDVLRNATTREKNKAIKKIAEKLDEKRKEILEANKIDVEKARERGVKESLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVLAIKEALRETEVPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNATVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQRPGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEKTREIVPDVVPATEEDWPTEYLDLIIAIKVVRDVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLG
type: DOMAIN
name: GPR_dom
description: GPR domain

phrase: VRDVDEAIEHIKKYSTGHSES
type: CONSERVED_SITE
name: G-glutamylP_reductase_CS
description: Gamma-glutamyl phosphate reductase GPR, conserved site
Protein sequence:
MGRTLANKQDIVTELKGLVDEAQMAFVVDYQGLTVAEITDLRNRLEASNSVCKVTKNTLMRRAIADADDWQPLTELLKGTNAFVLVKDDPGSAIKAYQAFQKDTKKTELRGGLLEGRLLSSDELKAIGDLPSKEVLIAQIAGAINGVATKLAVGIKEVPNSLARGIKAVSEQTDA

Annotated regions:
phrase: KQDIVTELKGLVDEAQMAFVVDYQGLTVAEITDL
type: CONSERVED_SITE
name: Ribosomal_uL10_CS_bac
description: Large ribosomal subunit protein uL10, conserved site, bacteria
Protein sequence:
MKFTRTLVLASTSLLATVATSQAQEVKRDTKKQGEVVLKPITIISHGKDNIEATGGTVLTYKDIEKLQPANVSELFSRQSSIAVSGGGGPSKRIHVLGMEQSNLAVSVDGVPQTATSWHHTGSNVIDPAFLKRVEVEAGAAAADSGFGAAAGAIRYETVNALDLLEPGKTFGARIIGSYGTNGRGFSGSTAAYGLKDGFDWLLMLHGTSGHNYKNGDGTEILGTEPAARNILGKAGYEFDGNRIDIGYERSRDKADRLIKMNMGLPGDTEYPLEVARDSVNIKYTRTDATDMWDPEVQFYYNRNDYWRNDYQNRTNGNMILKEDLYGGKLQNTFTIDYGKITAGIDFGKHDYNTDNYGHNDRRYRKFNTQQVGAFTQGRFEFDNGFSLSTGARYDYSRFADWNDEVFSDSGASVNGTLSYKFNEHIEVFAGASRTWLGYVLGDYGYVHARNNAFYTDPTFSPGRARNYKAGVNFGGADWSAGITLFDTRIAGLPNYDSQKLGNDPEEYRSRGFTLNARYIWNYTTIGATFTKAKVTAGDDPVLPNSGSFMPIGDMATLFIDQEIPDYNMKVGATLAWAGRISDEAATAANFYDQPAYTVVNAYAEWNPPAVKNMTLRVGVENLFNENYYERTSFAPSQNRGGIDAVWAPGRTFTFQTAFKF

Annotated regions:
phrase: GKAGYEFDGNRIDIGYERSRDKADRLIKMNMGLPGDTEYPLEVARDSVNIKYTRTDATDMWDPEVQFYYNRNDYWRNDYQNRTNGNMILKEDLYGGKLQNTFTIDYGKITAGIDFGKHDYNTDNYGHNDRRYRKFNTQQVGAFTQGRFEFDNGFSLSTGARYDYSRFADWNDEVFSDSGASVNGTLSYKFNEHIEVFAGASRTWLGYVLGDYGYVHARNNAFYTDPTFSPGRARNYKAGVNFGGADWSAGITLFDTRIAGLPNYDSQKLGNDPEEYRSRGFTLNARYIWNYTTIGATFTKAKVTAGDDPVLPNSGSFMPIGDMATLFIDQEIPDYNMKVGATLAWAGRISDEAATAANFYDQPAYTVVNAYAEWNPPAVKNMTLRVGVEN
type: DOMAIN
name: TonB-dep_rcpt_b-brl
description: TonB-dependent receptor-like, beta-barrel

phrase: TVLTYKDIEKLQPANVSELFSRQSSIAVSGGGGPSKRIHVLGMEQSNLAVSVDGVPQTATSWHHTGSNVIDPAFLKRVEVEAGAAAADSGFGAAAG
type: DOMAIN
name: Plug_dom
description: TonB-dependent receptor, plug domain
Protein sequence:
MPTNAGTSLSSYKHIVAIGTTVKSESLESAAYEIPRKRKMRSDSAAVSGNSVSTPKKLKSHLPSSVPNPGMSEKEVVEDSNEILRYPVNLAVSDCLGTKSKWSPRDEEQMRAVKEALHVSKAPSTILCREDEQIRIFEFVKGCIDQQKAGSLYICGCPGTGKSLSMEKVVQQVGDWSTQAGLPPVDTLSVNCTSLSKTTDIFSKILGEIKPGKNANTNSSPLQHLQNLFSQKQESSSSRMMLIIADEMDYLITKDRGVLYDLFMLTTLPFSRCILIGVANAIDLADRFLPKLKSLNCKPMVITFRAYSKDQILRILQERLRVLSYVAFQPKALELCARKVAAASGDMRKALCVCRSALEILEIETRGSTGPESQGPTPDDSVVRMDHMAAALSKTFKSPVVETIQSLPQHQQIIICAAAKAFRGSKKDATVGELNKLYLEICKSWMISPAGITEFTNMCTVLNDQGILKVGQARRDKLKRVSLRVDESDITFALQEIRFFRNCLL

Annotated regions:
phrase: YSKDQILRILQERLRVLSYVAFQPKALELCARKVAAASGDMRKALCVCRSALEILEI
type: DOMAIN
name: Cdc6_ORC1-like_ATPase_lid
description: Cdc6/ORC1-like, ATPase lid domain

phrase: ETIQSLPQHQQIIICAAAKAFRGSKKDATVGELNKLYLEICKSWMISPAGITEFTNMCTVLNDQGILKVGQARRDKLKRVSLRVDESDITF
type: DOMAIN
name: Cdc6_C
description: Cdc6, C-terminal

phrase: PQHQQIIICAAAKAFRGSKKDATVGELNKLYLEICKSWMISPAGITEFTNMCTVLNDQGILKVGQARRDKLKRVSLRVDESD
type: DOMAIN
name: Cdc6_C
description: Cdc6, C-terminal

phrase: QKAGSLYICGCPGTGKSLSMEKVVQQVGDWSTQAGLPPVDTLSVNCTSLSKTTDIFSKILGEIKPGKNANTNSSPLQHLQNLFSQKQESSSSRMMLIIADEMDYLITKDRGVLYDLFMLT
type: DOMAIN
name: AAA_22
description: ORC1/DEAH AAA+ ATPase domain

phrase: ICAAAKAFRGSKKDATVGELNKLYLEICKSWMISPAGITEFTNMCTVLNDQGILKVGQARRDKLKRVSLRVDESDITFA
type: DOMAIN
name: Cdc6_C
description: Cdc6, C-terminal
Protein sequence:
MPTQVQMRPLLRIFAEPILLILIFLFTLGAKGEKVLQETFLGLQEAPIHDLGDLRLVPSRLDFGTWSVGQARSQTVTLFNQHSNRTLQLNAVAGPSPAFYSSFLGTREVPPQGNTTFNVVFLPRQLGAIAADLLIHTSFGQAELAVQGEGSECPYRLKPLVGIKAPMNATLTPEIHMYNPHERPLQILEIYSSGGEFQLELPSGGSEGPQNLWKIPPHTLKPVIRISFHGRTAGNHSAYIRIKVAEQELDIFIPVEFEILPRHSVYARNPLADFGRVATLNAPDALQFKLDVRNDESRQLFGSYLRQIPGLSFDANNTSIVLDASLFEGDEIINDLLVINSNQSSTSPGADQPFTVLVRAEIFHGGLTFDRNATRFVTTSPEGVEGEPLERKRSLVVRNKFAIPLMLFNVSLTEPIDESILEVTLVGDPRILIQPDESVELLRLNLLNDQVPFKSFLRIETNVTVFKLPLVSCSGRLHVSTQPIVLNFRQESLEKAAYNLELDLGTVPFAEMSRDGFVILRNDNPVPVRITNWFFKHPKTVYSQSTFLGCRATAIGHPVSVENDTKGWHLCTEIRAGESAVFKVAIQTYEADATFGTLKVWTPYEVIRVRVKFEASVGHLEIDQEQLSFKNCFPGKMCTAVLSIRSSFTHPVHVKGISFALPVGLRFKDFNAKGTTIAPQTLTKVGRIYFDPASVCRNNCYIRESTNDLAIFPSVPGGGNGNSGVINNNLLYDGVELRQRTELFRQLRRQLSSMSLTLHSEELPPLEL

Annotated regions:
phrase: RLVPSRLDFGTWSVGQARSQTVTLFNQHSNRTLQLNAVAGPSPAFYSSFLGTREVPPQGNTTFNVVFLPRQLGAIAADLLIH
type: DOMAIN
name: TMEM131-like_N
description: Transmembrane protein 131-like, N-terminal

phrase: PYRLKPLVGIKAPMNATLTPEIHMYNPHERPLQILEIYSSGGEFQLELPSGGSEGPQNLWKIPPHTLKPVIRISFHGRTAGNHSAYIRI
type: DOMAIN
name: Ig_TMEM131_2
description: Transmembrane protein 131, second Ig-like domain
Protein sequence:
MRVSWLESRCDTPFANNLSFISSGSSSSSSFTLASTACRNSCLCSSSIFFQVLRRNCSSNCCSISNVDISLSAFSFNRFETSSKMARYNLPCPRSLLAILSPPKCCNSPAISCQLRRCCSGCPSIDLNSSLRISTLERRVLPFSLWVSSRAKFANCSSLQCWRKSRSESFR

Annotated regions:
Protein sequence:
MESQQLHQNPRSLHGSAYASVTSKEVPSNQDPLAVSASNLPEFDRDSTKVNSQQETTPGTSAVPENHHHVSPQPASVPPPQNGQYQQHGMMTPNKAMASNWAHYQQPSMMTCSHYQTSPAYYQPDPHYPLPQYIPPLSTSSPDPIDSQNQHSEVPQAETKVRNNVLPPHTLTSEENFSTWVKFYIRFLKNSNLGDIIPNDQGEIKRQMTYEEHAYIYNTFQAFAPFHLLPTWVKQILEINYADILTVLCKSVSKMQTNNQELKDWIALANLEYDGSTSADTFEITVSTIIQRLKENNINVSDRLACQLILKGLSGDFKYLRNQYRTKTNMKLSQLFAEIQLIYDENKIMNLNKPSQYKQHSEYKNVSRTSPNTTNTKVTTRNYQRTNSSKPRAAKAHNIATSSKFSRVNNDHINESTVSSQYLSDDNELSLGQQQKESKPTHTIDSNDELPDHLLIDSGASQTLVRSAHYLHHATPNSEINIVDAQKQDIPINAIGNLHFNFQNGTKTSIKALHTPNIAYDLLSLSELANQNITACFTRNTLERSDGTVLAPIVKHGDFYWLSKKYLIPSHISKLTINNVNKSKSVNKYPYPLIHRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHVKGSRLKYQESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSLVSPKNDKSARQHAGLAGLDITTILPFGQPVIVNNHNPDSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQDKQSKLDQFNYDTLTFDDDLNRLTAHNQSFIEQNETEQSYDQNTESDHDYQSEIEINSDPLVNDFSSQSINPLQLDKEPVQKVRAPKEVDADISEYNILPSPVRSRTPHIINKESTEMGGTVESDTTSPRHSSTFTARNQKRPGSPNDMIDLTSQDRVNYGLENIKTTRLGGTEEPYIQRNSDTNIKYRTTNSTPSIDDRSSNSESTTPIISIETKAVCDNTPSIDTDPPEYRSSDHATPNIMPDKSSKNVTADSILDDLPLPDLTHQSPTDTSDVSKDIPHIHSRQTNSSLGGMDDSNVLTTTKSKKRSLEDNETEIEVSRDTWNNKNMRSLEPPRSKKRINLIAAIKGVKSIKPVRTTLRYDEAITYNKDNKEKDRYVEAYHKEISQLLKMNTWDTNKYYDRNDIDPKKVINSMFIFNKKRDGTHKARFVARGDIQHPDTYDSDMQSNTVHHYALMTSLSIALDNDYYITQLDISSAYLYADIKEELYIRPPPHLGLNDKLLRLRKSLYGLKQSGANWYETIKSYLINCCDMQEVRGWSCVFKNSQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRSKYMKLGMEKSLTEKLPKLNVPLNPKGKKLRAPGQPGHYIDQDELEIDEDEYKEKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKPTKPDNKLVAISDASYGNQPYYKSQIGNIFLLNGKVIGGKSTKASLTCTSTTEAEIHAVSEAIPLLNNLSHLVQELNKKPIIKGLLTDSRSTISIIKSTNEEKFRNRFFGTKAMRLRDEVSGNNLYVYYIETKKNIADVMTKPLPIKTFKLLTNKWIH

Annotated regions:
phrase: EPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTT
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: KKVINSMFIFNKKRDGTHKARFVARGDIQHPDTYDSDMQSNTVHHYALMTSLSIALDNDYYITQLDISSAYLYADIKEELYIRPPPHLGLNDKLLRLRKSLYGLKQSGANWYETIKSYLINCCDMQEVRGWSCVFKNSQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKI
type: DOMAIN
name: RVT_2
description: Reverse transcriptase, RNA-dependent DNA polymerase

phrase: ESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSLVSPKNDKSARQHAGLAGLDITTIL
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: LIDSGASQTLVRSAHYLHHATPNSEINIVDAQKQDIPINAIGNLHFNFQNGTKTSIKALHTPNIAYDLLSLSELANQ
type: DOMAIN
name: PolX-like_BBD
description: Retrovirus-related Pol polyprotein from transposon TNT 1-94-like, beta-barrel domain
Protein sequence:
MATTRLNPSCHFPASTRLSCESYLGLRTTGRISYARTLTAPRGYLAVKANGGQASVVTAAAITEKQQKKYPGESKGFVEEMRFVAMRLHTKDQAREGEKESRSPEEGPVAKWEPTVEGYLHFLVDSKLVYDTLEGIIDGSNFPTYAGFKNTGLERAESLRKDLEWFKEQGYEIPEPMAPGKTYSEYLKDLAENDPQAFICHFYNIYFAHSAGGQMIGTKVSKKILDNKELEFYKWDGQLSQLLQNVRQKLNKVAEWWTREEKSHCLEETEKSFKFSGEILRLILS

Annotated regions:
Protein sequence:
MDFYGMSLAETRSWAESLGLPGYRGQQVFEGLYAPGTNRFADISVLPRELAERLDAEHRLIPGEESRRQESADGTVKSLLRMHDGKLVECVSIPTEDRHTICVSSQVGCAVGCTFCASGLNGVERDLTAGEIVYQILFHHRRRPVTNVVFMGSGEPLFNYDNVVKAIRVLAEPRGLGMGKRRFTVSTSGVPKRIRQLGVDEPQVTLAFSLHAADDETRSRIVPINRRWPLAEVMDAMDEYSAAVNRRMTLEYVLLAESNMTDAHADSLAAVAQKYRAHVNLIPFNPVFETTHQRPETEAVNAFAARVAAQGVNITVRGQRGADIDAACGQLRRREMSQG

Annotated regions:
phrase: HTICVSSQVGCAVGCTFCASGLNGVERDLTAGEIVYQILFHHRRRPVTNVVFMGSGEPLFNYDNVVKAIRVLAEPRGLGMGKRRFTVSTSGVPKRIRQLGVDEPQVTLAFSLHAADDETRSRIVPINRRWPLAEVMDAMDEYSAAVNRRMTLEYVLLAESNMTDAHADSLAAVAQKYRAHVNLIPFNPVFETTHQRPETEAVNAFAA
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: FYGMSLAETRSWAESLGLPGYRGQQVFEGLYAPGTNRFADISVLPRELAERLDAEHRLIPGEESRRQESADGTVKSLLRMHDGKLVECVSIPTEDRHTICVSSQVGCAVGCTFCASGLNGVERDLTAGEIVYQILFHHRRRPVTNVVFMGSGEPLFNYDNVVKAIRVLAEPRGLGMGKRRFTVSTSGVPKRIRQLGVDEPQVTLAFSLHAADDETRSRIVPINRRWPLAEVMDAMDEYSAAVNRRMTLEYVLLAESNMTDAHADSLAAVAQKYRAHVNLIPFNPVFETTHQRPETEAVNAFAARVAAQGVNITVRGQRGADIDAACGQLRRREM
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TEDRHTICVSSQVGCAVGCTFCASGLNGVERDLTAGEIVYQILFHHRRRPVTNVVFMGSGEPLFNYDNVVKAIRVLAEPRGLGMGKRRFTVSTSGVPKRIRQLGVDEPQVTLAFSLHAADDETRSRIVPINRRWPLAEVMDAMDEYSAAVNRRMTLEYVLLAESNMTDAHADSLAAVAQKYRAHVNLIPFNPVFETTHQRPETEAVNAFAARVAAQGVNITVRGQRGADI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SSQVGCAVGCTFCASGLNGVERDLTAGEIVYQILFHHRRRPVTNVVFMGSGEPLFNYDNVVKAIRVLAEPRGLGMGKRRFTVSTSGVPKRIRQLGVDEPQVTLAFSLHAADDETRSRIVPINRRWPLAEVMDAMDEYSAAVNRRMTLEYVLLAESNMT
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MPTGSILVADDDAAIRTVLNQALSRAGYEVRSCGNAATLWRWVSQGDGDLVITDVVMPDENAFDLLPRIKKARPDLPVIVMSAQNTFMTAIRASERGAYEYLPKPFDLKELISIVGRALAEPKKAEKLALGSDEQENIPLVGRSAAMQEIYRLLARLMQTDLTVMIAGESGTGKELVARALHDYGKRRNGPFVAINMAAIPRDLIESELFGHEKGSFTGATTRNAGRFEQAEGGTLFLDEIGDMPMEAQTRLLRVLQQGEYTTVGGRTPIKTDVRIIAATNKDLRTLIQQGLFREDLFFRLNVVPLRLPPLRERSEDVPDLVRHFFLQAEREGLPAKQVDSAALDRLKRYRWPGNVRELENLVRRLAALYPQEIITPSIIEAELSEPAPSALSEDGPVDATLGASVERHLNGYFSGFGEDLPPPGLYHRILRDVEYPLLSAALAATRGNQIKAAELLGLNRNTLRKKIRDLDIQVIRTSR

Annotated regions:
phrase: ILVADDDAAIRTVLNQALSRAGYEVRSCGNAATLWRWVSQGDGDLVITDVVMPDENAFDLLPRIKKARPDLPVIVMSAQNTFMTAIRASERGAYEYLPKPFDLKELISI
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: PLLSAALAATRGNQIKA
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: AELLGLNRNTLRKKIRDLDI
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: LVGRSAAMQEIYRLLARLMQTDLTVMIAGESGTGKELVARALHDYGKRRNGPFVAINMAAIPRDLIESELFGHEKGSFTGATTRNAGRFEQAEGGTLFLDEIGDMPMEAQTRLLRVLQQGEYTTVGGRTPIKTDVRIIAATNKDLRTLIQQGLFREDLFFRLNVVPLRLPPLRERSEDVPDLVRHFFLQAEREGLPAKQVDSAALDRLKRYRWPGNVRELENLVRRLA
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: TDLTVMIAGESGTGKELVARALHDYGKRRNGPFVAINMAAIPRDLIESELFGHEKGSFTGATTRNAGRFEQAEGGTLFLDEIGDMPMEAQTRLLRVLQQGEYTTVGGRTPIKTDVRIIAATNKDLRTLIQQGLFREDLFFRLN
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VMIAGESGTGKEL
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_1
description: Sigma-54 interaction domain, ATP-binding site 1

phrase: GRFEQAEGGTLFLDE
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_2
description: Sigma-54 interaction domain, ATP-binding site 2

phrase: LVGRSAAMQEIYRLLARLMQTDLTVMIAGESGTGKELVARALHDYGKRRNGPFVAINMAAIPRDLIESELFGHEKGSFTGATTRNAGRFEQAEGGTLFLDEIGDMPMEAQTRLLRVLQQGEYTTVGGRTPIKTDVRIIAATNKDLRTLIQQGLFREDLFFRLNVVP
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: LRDVEYPLLSAALAATRGNQIKAAELLGLNRNTLRKKI
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: WPGNVRELE
type: CONSERVED_SITE
name: Sigma_54_int_dom_CS
description: Sigma-54 interaction domain, conserved site

phrase: GSILVADDDAAIRTVLNQALSRAGYEVRSCGNAATLWRWVSQGDGDLVITDVVMPDENAFDLLPRIKKARPDLPVIVMSAQNTFMTAIRASERGAYEYLPKPFDLKELISI
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: SILVADDDAAIRTVLNQALSRAGYEVRSCGNAATLWRWVSQGDGDLVITDVVMPDENAFDLLPRIKKARPDLPVIVMSAQNTFMTAIRASERGAYEYLPKPFDLKELISIVGRA
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain
Protein sequence:
MAVSLAGKKIVFVTGNAKKLEEVQGPVLVEDTCLCFNALGGLPGPYIKWFLEKLKPEGLYQLLAGFEDKSAYALCTFALCTGDPSEPVRLFRGRTSGQIVVPRGCQDFGWDPCFQPDGYTQTYAEMPKAEKNGISHRFRALRQLQEYFGSLTRPAAGGGHLSQESGEG

Annotated regions:
Protein sequence:
MRIQSLFVLFNVAIIAWSYPYEPLRVLQVGENEVMEVPESEKLNLRRRGVKFFDVTKHTSFLPFFNKEEEPTVPTYNYPPEISNKEVVDDSIKNIDKGSMHKNLAKFTSFYTRYYKSDHGFESAEWLAATIANITKDIPQDTLTIEHFDHKEWKQYSIIVRVTGSTTPEDIIIIGSHQDSINLLLPSIMAAPGADDNGSGTVTNMEALRLYTENFLKRGFRPNNTVEFHFYSAEEGGLLGSLDVFTAYAKQKKHVRAMLQQDMTGYVSDPEDEHVGIVTDYTTPALTDFIKLIINSYLSIPYRDTQCGYACSDHGSATRNGFPGSFVIESEFKKTNKYIHSTMDTLDRLSLAHMAEHTKIVLGVIIELGSWSAW

Annotated regions:
phrase: IIVRVTGSTTPEDIIIIGSHQDSINLLLPSIMAAPGADDNGSGTVTNMEALRLYTENFLKRGFRPNNTVEFHFYSAEEGGLLGSLDVFTAYAKQKKHVRAMLQQDMTGYVSDPEDEHVGIVTDYTTPALTDFIKLIINSYLSIPYRDTQCGYACSDHGSATRNGFPGSFVIESEFKKTNKYIHSTMDTLDRLSLAHMAEHTKIVL
type: DOMAIN
name: Peptidase_M28
description: Peptidase M28
Protein sequence:
MRVKGTRRNCWWKWGTMLLGMLMICSAQENLWVTVYYGVPVWKEATTTLFCASDAKAYDTEAHNVWATHACVPTDPNPQEVKLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTDYVNTNSTNATTSGREVIEGGMKNCSFNITTDRKDKWRREYALFYKLDVTQIENESNDSYRLISCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKQFNGTGPCRNVSTVQCTHGIKPVVSTQLLLNGSLAEEDIVIRSENFTNNAKTIIVQLNRTVIINCARPNNNTRKGIHIGPGGALYATGQIIGNIRQAHCNISTESWNKTLNQVREKLKEQFGNTTTIFFNQSSGGDPEITMHSFNCRGEFFYCNTSQLFNTSLLFDKSPEKPNNGTITLPCRIKQIINLWQEVGKAMYAPPISGPINCSSEITGLLLTRDGGNNNDTNSTHEVFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQRERRAVGIGAIFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLKDQQLLGIWGCSGKLICTTTVPWNTSWSNKTMTDIWDNMTWMEWDREISNYTSLIYTLIEESQNQQEKNELELLELDKWANLWNWFDISNWLWYIKIFIMIVGGLVGLRIVFTVLSIVNRVRQGYSPLSFQTRLPTQRGPDRPEGIEESGGERDRDRSSPLVDGFLAIIWVDLRSLFLFSYHRLRD

Annotated regions:
phrase: VQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLKDQQLLGIWGCSGKLICTTTVPWNTSWSNKTMTDIWDNMTWMEWDREISNYTSLIYTLIEESQNQQEK
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLKDQQLLGIWGCSGKLICTTTVPWNTSWSNKTMTDIWDNMTWMEWDREISNYTSLIYTLIEESQNQQEKNELELLELDKWANLWNWFDISNWLWYIKIFIMIVGGLVGLRIVFTVLSIVNRVRQGYSPLSFQ
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKEATTTLFCASDAKAYDTEAHNVWATHACVPTDPNPQEVKLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTDYVNTNSTNATTSGREVIEGGMKNCSFNITTDRKDKWRREYALFYKLDVTQIENESNDSYRLISCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNDKQFNGTGPCRNVSTVQCTHGIKPVVSTQLLLNGSLAEEDIVIRSENFTNNAKTIIVQLNRTVIINCARPNNNTRKGIHIGPGGALYATGQIIGNIRQAHCNISTESWNKTLNQVREKLKEQFGNTTTIFFNQSSGGDPEITMHSFNCRGEFFYCNTSQLFNTSLLFDKSPEKPNNGTITLPCRIKQIINLWQEVGKAMYAPPISGPINCSSEITGLLLTRDGGNNNDTNSTHEVFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQRER
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MSEVNVPLSFSDAAAKRVKALIAEEENPSLMLRVYITGGGCSGFQYGFTFDETVNEGDTKIENSGVILVVDPMSLQYLIGGVVDYTEGLEGSRFFVNNPNATTTCGCGASFSV

Annotated regions:
phrase: FFVNNPNATTTCGCGAS
type: CONSERVED_SITE
name: FeS_cluster_insertion_CS
description: FeS cluster insertion, C-terminal, conserved site

phrase: LSFSDAAAKRVKALIAEEENPSLMLRVYITGGGCSGFQYGFTFDETVNEGDTKIENSGVILVVDPMSLQYLIGGVVDYTEGLEGSRFFVNNPNATTTCGC
type: DOMAIN
name: FeS_biogenesis
description: FeS cluster biogenesis
Protein sequence:
MNDTIHATDAAHAPHSTQQHSMRALAIAAIGVVFGDIGTSPLYSLKEAFSPAHGIPLTEGSILGVISLLFWAIILVVGIKYLLFVMRADNNGEGGVLALMALSLRPLDSKTRVAGALMALGIFGACMFYGDAVITPAISVMSAVEGLEIATPHLSHLVLPITIVILIALFWIQRHGTALVGKLFGPIMVLWFVAIAALGVYHIVRVPGIMAAINPYYAASFMADHLLQAYVVLGSVVLVLTGAEALYADMGHFGAKPIRIAAYGLVMPSLVLNYFGQGALLIQNPKAIENPFFLLAPEWGLLPLVILSTVATVIASQAVISGAYSLTSQAIQLGYVPRMKVLHTSELAIGQIYVPVVNWLLLFVILCIVIGFKSSDNLAAAYGIAVTATMVITTVLAAVVMVKVWNWNRLLVGAIIAVFLAVDLGFFGANLLKVAQGGWLPLGIGALLFFLLMTWYKGRHIVKERTAADGIPLEPFLQGLLAHPPHRVSGTAIYLTGNDKLVPVSLLHNLKHNKVLHERTIFLTFVTRDIPYVRDDKRQTSRDAGGGLYIVRAEYGFNETPDVKAVLEEFGRTHDMTFELMDTSFFLARETVVPTHLPGMSIWRERVFAWMHQNAAKPTDFFSIPANRVVELGTKIEI

Annotated regions:
phrase: LAIAAIGVVFGDIGTSPLYSLKEAFSPAHGIPLTEGSILGVISLLFWAIILVVGIKYLLFVMRADNNGEGGVLALMALSLRPLDSKTRVAGALMALGIFGACMFYGDAVITPAISVMSAVEGLEIATPHLSHLVLPITIVILIALFWIQRHGTALVGKLFGPIMVLWFVAIAALGVYHIVRVPGIMAAINPYYAASFMADHLLQAYVVLGSVVLVLTGAEALYADMGHFGAKPIRIAAYGLVMPSLVLNYFGQGALLIQNPKAIENPFFLLAPEWGLLPLVILSTVATVIASQAVISGAYSLTSQAIQLGYVPRMKVLHTSELAIGQIYVPVVNWLLLFVILCIVIGFKSSDNLAAAYGIAVTATMVITTVLAAVVMVKVWNWNRLLVGAIIAVFLAVDLGFFGANLLKVAQGGWLPLGIGALLFFLLMTWYKGRHIVKERTAADGIPLEPFL
type: DOMAIN
name: K_trans_N
description: K+ potassium transporter, integral membrane domain

phrase: SGTAIYLTGNDKLVPVSLLHNLKHNKVLHERTIFLTFVTRDIPYVRDDKRQTSRDAGGGLYIVRAEYGFNETPDVKAVLEEFGRTHDMTFELMDTSFFLARETVVPTHLPGMSIWRERVFAWMHQNAAKPTDFFSIPANRVVELGTKIE
type: DOMAIN
name: K_trans_C
description: K+ potassium transporter, C-terminal domain
Protein sequence:
MAREKFERNKPHVNIGTIGHVDHGKTTLTAAITSVLAKKGQAKVQDYAEIDGAPEERERGITINTAHVEYETDGRHYAHVDCPGHADYVKNMITGAAQMDGAILVCAATDGPMAQTKEHILLAKQVGVPALVVALNKCDMVDDEEIIELVEMEIRELLSSYDFPGDDIPIVQVSGLKAIEGEAEWEAKIDELMEAVDASIPEPEREIEKPFLMAVEDVFSITGRGTVATGRIERGKVKKGEEIEIVGIRDSRKTTVTGVEMFRKDLDEGLAGDNCGLLLRGIEKEDIERGMVLVKPGSITPHTKFEGQVYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTAEDGSNVEMVMPGDNIKMTGELICPVAIEQGMRFAIREGGRTIGAGVVSKIIE

Annotated regions:
phrase: PHVNIGTIGHVDHGKTTLTAAITSVLAKKGQAKVQDYAEIDGAPEERERGITINTAHVEYETDGRHYAHVDCPGHADYVKNMITGAAQMDGAILVCAATDGPMAQTKEHILLAKQVGVPALVVALNKCDMVDDEEIIELVEMEIRELLSSYDFPGDDIPIVQVSGLKAIEGEAEWEAKIDELMEAVDASIPE
type: DOMAIN
name: EF-Tu_GTP-bd
description: Elongation factor Tu (EF-Tu), GTP-binding domain

phrase: GTVATGRIERGKVKKGEEIEIVGIRDSRKTTVTGVEMFRKDLDEGLAGDNCGLLLRGIEKEDIERGMV
type: DOMAIN
name: EFTu-like_2
description: Translation elongation factor EFTu-like, domain 2

phrase: KPHVNIGTIGHVDHGKTTLTAAITSVLAKKGQAKVQDYAEIDGAPEERERGITINTAHVEYETDGRHYAHVDCPGHADYVKNMITGAAQMDGAILVCAATDGPMAQTKEHILLAKQVGVPALVVALNKCDMVDDEEIIELVEMEIRELLSSYDFPGDDIPIVQVSGLKAIEGEAEWEAKIDELMEAVDASI
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: VNIGTIGHVDHGKTTLTAAITSVLAKKGQAKVQDYAEIDGAPEERERGITINTAHVEYETDGRHYAHVDCPGHADYVKNMITGAAQMDGAILVCAATDGPMAQTKEHILLAKQVGVPALVVALNKCDMVDDE
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: DGAPEERERGITINT
type: CONSERVED_SITE
name: G_TR_CS
description: Tr-type G domain, conserved site

phrase: SITPHTKFEGQVYVLKKEEGGRHTPFFAGYRPQFYIRTTDVTGQITAFTAEDGSNVEMVMPGDNIKMTGELICPVAIEQGMRFAIREGGRTIGAGVVSK
type: DOMAIN
name: Transl_elong_EFTu/EF1A_C
description: Translation elongation factor EFTu/EF1A, C-terminal

phrase: FLMAVEDVFSITGRGTVATGRIERGKVKKGEEIEIVGIRDSRKTTVTGVEMFRKDLDEGLAGDNCGLLLRGIEKEDIERGMVLVKP
type: DOMAIN
name: EFTU_2
description: Elongation factor Tu, domain 2

phrase: NIGTIGHVDHGKT
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: ERGITINT
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: AHVDCPGHAD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: TGAAQMDGAIL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: LVVALNKCD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: KPHVNIGTIGHVDHGKTTLTAAITSVLAKKGQAKVQDYAEIDGAPEERERGITINTAHVEYETDGRHYAHVDCPGHADYVKNMITGAAQMDGAILVCAATDGPMAQTKEHILLAKQVGVPALVVALNKCDMVDDEEIIELVEMEIRELLSSYDFPGDDIPIVQVSGLKAIEGEAEWEAKIDELMEAVDASIPEP
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain
Protein sequence:
MSSPDIVGILENTKELDRLRKDQEEVLVEINKMHKKLQASPEIVEKPGDISLAKLKNLYIQAKELSENEVTVSNILLTQLDLLLPYGPTGQQRRKLGVVAEGNDQKRKRMKVDSDVIRLSPSMRNQIEAYASLKGEQVAARVTAESADKDEWFVVKVIHFDRETKEVEVLDEEPGDDEEGSGQRTYKLPMLCILPFPKRNDPSNTQEFPPGKHVLAVYPGTTALYKATVVSTPRKRKSDEYLLEFDDDEEDGALPQRTVPFHKVVALPEGHRQ

Annotated regions:
phrase: EAYASLKGEQVAARVTAESADKDEWFVVKVIHFDRETKEVEVLDEEPGDDEEGSGQRTYKLPMLCILPFPKRNDPSNTQEFPPGKHVLAVYPGTTALYKATVVSTPRKRKSDEYLLEFDDDEEDGALPQRTVPFHKVVALPEGHR
type: DOMAIN
name: SGF29_tudor-like_dom
description: SGF29 tudor-like domain

phrase: FPPGKHVLAVYPGTTALYKATVVSTPRKRKSDEYLLEFDDDEEDGALPQRTVPFHKVVA
type: DOMAIN
name: Tudor_SGF29_rpt2
description: SAGA-associated factor 29, second Tudor domain

phrase: KGEQVAARVTAESADKDEWFVVKVIHFDRETKEVEVLDEEPGDDEEGSGQRTYKLPMLCILPFPKRNDPSNTQEFPPGKHVLAVYPGTTALYKATVVSTPRKRKSDEYLLEFDDDEEDGALPQRTVPFHKVVAL
type: DOMAIN
name: SGF29_tudor-like_dom
description: SGF29 tudor-like domain

phrase: YASLKGEQVAARVTAESADKDEWFVVKVIHFDRETKEVEVLDEEPGDDEEGSGQRTYKLPMLCILPFPKR
type: DOMAIN
name: Tudor_SGF29_rpt1
description: SAGA-associated factor 29, first Tudor domain
Protein sequence:
MESQQLSQHSPIFHGSACASVTSKEVQTTQDPLDISASKTEECEKVSTQANSQQPTTPPSSAVPENHHHASPQAAQVPLPQNGPYPQQRMMNTQQANISGWPVYGHPSLMPYPPYQMSPMYAPPGAQSQFTQYPQYVGTHLNTPSPESGNSFPDSSSAKSNMTSTNQHVRPPPILTSPNDFLNWVKIYIKFLQNSNLGDIIPTATRKAVRQMTDDELTFLCHTFQLFAPSQFLPPWVKDILSVDYTDIMKILSKSINKMQSDTQEVNDITTLATLHYNGSTPADAFEAEVTNILDRLNNNGIPINNKVACQFIMRGLSGEYKFLPYARHRCIHMTVADLFSDIHSMYEEQQESKRNKSTYRRSPSDEKKDSRTYTNTTKPKSITRNSQKPNNSQSRTARAHNVSTFNNSPGPDNDLIRGSTTEPIQLKNTHDLHLRPGTY

Annotated regions: