Protein sequence:
MGARASVLSGGKLDAWEKIRLRPGGRKKYRLKHLVWASRELERFALNPDLLETADGCQQILGQLQPALKTGTEDLQSLYNTIAVLYCVHQRIDVKDTKEALGKIEEIQNKNKQRTQQAPAAADKEKDSKISQNYPIVQNAQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNAMLNTVGGHQAAMQMLKDTINEEAAEWDRLHPVHAGPIPPGQMREPRGSDIAGTTSTLQEQVAWMTGNPPIPVGDIYKRWIILGLNKIVRMYSPVSILDIKQGPKEPFRDYVDRFFRVLRAEQATQDVKNWMTDTLLVQNANPDCRTILKALGRGASIEEMMTACQGVGGPSHKARVLAEAMSQVTNASAAIMMQKGNFKGPRRTVKCSNCGKEGHIARNCRAPRKKGCWKCGQEGHQMKDCTGRQANFFRENLAFQQGKAREFPPEEARANSPTSRELRVRRGDHPLSEAGAERTGTSFNFPQITLWQRPIVTVKIEGQLKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYEQVAIEIFGKKAIGTVLVGPTPVNIIGRNILTQMGCTLNLPISPIETVPVTLKPGMDGPKVKQWPLTEEKIKALTEICLEMEKEGKISKIGPENPYNTPIFAIKKKNSTRWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVSVLDVGGAYFSVPLHEDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPEVIIYQYMDDLYVGSDLEIGQHREKIEELRAHLLRWGFTTPDQKHQKEPPFLWMGYELHPDKWTVQPVKLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCXLLRGAKALTEIVPLTKEAELELAENREILKEPVHGAYYDPSKELIAEIQKQGPDQWTYQIYQEPFKNLKTGKYAKMRSAHTNDVKQLTEVVQKIATESIVIWGKIPKFRLPIQKETWETWWTEHWQATWIPEWEFVNTPHLVKLWYQLETEPIEGAETYYVDGAANRETKMGKAGYVTDRGKQKIVSLTETTNQKTELQAIYLALQESGPEVNIVTDSQYALGIIQAQPDKSESELVNQIIEELIKKEKFYLSWVPAHKGIGGNEQVDKLVSSGIRKVLFLDGIDKAQVQHEKYHSNWRAMASDFNLPPIVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVKMIHTDNGSNFTSAAVKAACWWADIHQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLRTAVQMAVFIHNFKRKGGIGGYSARERIIDIIATDIPTKELQKQISQIQKFRVYYRDSRDPIWKGPAKLLWKGEGAVVIQDNSEIKVVPRRKAKIIRDYGKQMAGDDCVAGRQDED

Annotated regions:
phrase: GARASVLSGGKLDAWEKIRLRPGGRKKYRLKHLVWASRELERFALNPDLLETADGCQQILGQLQPALKTGTEDLQSLYNTIAVLYCVHQRIDVKDTKEALGKIEEIQNKNKQRTQQAPAAADKEKDSKISQN
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: WQRPIVTVKIEGQLKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYEQVAIEIFGKKAIGTVLVGPTPVNIIGRNILTQMGCT
type: DOMAIN
name: Retropepsins
description: Retropepsins

phrase: KEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYEQVAIEIFGKKAIGTVLVGPTPVNIIGRN
type: DOMAIN
name: Peptidase_A2_cat
description: Peptidase A2A, retrovirus, catalytic

phrase: VYYRDSRDPIWKGPAKLLWKGEGAVVIQDNSEIKVVPRRKAKI
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: AETYYVDGAANRETKMGKAGYVTDRGKQKIVSLTETTNQKTELQAIYLALQESGPEVNIVTDSQYALGIIQAQPDKSESELVNQIIEELIKKEKFYLSWVPAHKGIGGNEQVDKLVSSG
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: RASVLSGGKLDAWEKI
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: RPGGRKKYRLKHLVWASR
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: ERFALNPDLLETADG
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: TGTEDLQSLYNTIAVLYCV
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: HQRIDVKDTKEAL
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: CWKCGQEGHQMKD
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: KCSNCGKEGHIARNC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: YYDPSKELIAEIQKQGPDQWTYQIYQEPFKNLKTGKYAKMRSAHTNDVKQLTEVVQKIATESIVIWGKIPKFRLPIQKETWETWWTEHWQATWIPEWEFVN
type: DOMAIN
name: RVT_connect
description: Reverse transcriptase connection

phrase: AQVQHEKYHSNWRAMASDFNLPPIVAKEIVASCDKC
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: VQPVKLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCXLLRGAKALTEIVPLTKEAELE
type: DOMAIN
name: RVT_thumb
description: Reverse transcriptase thumb

phrase: IEGAETYYVDGAANRETKMGKAGYVTDRGKQKIVSLTETTNQKTELQAIYLALQESGPEVNIVTDSQYALGIIQAQPDKSESELVNQIIEELIKKEKFYLSWVPAHKGIGGNEQVDKLVSSGI
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: FRVYYRDSRDPIWKGPAKLLWKGEGAVVIQDNSEIKVVPRRKAKIIR
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: VDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVKMIHTDNGSNFTSAAVKAACWWADIHQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLRTAVQMAVFIHNFKRKGGIGGYSARERIIDI
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: EGKISKIGPENPYNTPIFAIKKKNSTRWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVSVLDVGGAYFSVPLHEDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPEVIIYQYMDDLYVGSDLEIGQHREKIEELRAHLLRWGFTTPDQKHQKEPPFLWMGYE
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: ALLDTGADDTV
type: ACTIVE_SITE
name: Aspartic_peptidase_AS
description: Aspartic peptidase, active site

phrase: DGIDKAQVQHEKYHSNWRAMASDFNLPPIVAKEIVASCDKC
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: VTVKIEGQLKEALLDTGADDTVLEDINLPGKWKPKMIGGIGGFIKVRQYEQVAIEIFGKKAIGTVLVGPTPVNIIGRNIL
type: DOMAIN
name: Retropepsin-like_cat_dom
description: Retropepsin-like catalytic domain

phrase: SPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVKMIHTDNGSNFTSAAVKAACWWADIHQEFGIPYN
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: YSPVSILDIKQGPKEPFRDYVDRFFRVLRAEQATQDVKNWMTDTLLVQNANPDCRTILKALGRGASIEEMMT
type: DOMAIN
name: Gag_p24_C
description: Retroviral nucleocapsid Gag protein p24, C-terminal domain

phrase: GCWKCGQEGHQMKDC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: KCSNCGKEGHIARNC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: IKKKNSTRWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVSVLDVGGAYFSVPLHEDFRKYTAFTIPSTNNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFRKQNPEVIIYQYMDDLYVGSDLEIGQHREKIEELRAHLLRWGFTTPDQKHQKEPPFLWMGYE
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: KCSNCGKEGHIARNCR
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: GCWKCGQEGHQMKDCT
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type