nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
FRSSVLHSTQDLFLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLXNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYRYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVITPGTNTSNQVAVLYQGVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEHVNNSYECDIPIGAGICASYQTQTNSPRRARSVASQSXXXXXXXXXXXXXXXXXXXXXXXPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILPDPS

Annotated regions:
phrase: QPTESIVRFPNITNLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLXNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYRYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCGPKKSTNLVKNKCVN
type: DOMAIN
name: Spike_S1_RBD_SARS-CoV-2
description: Spike (S) protein S1 subunit, receptor-binding domain, SARS-CoV-2

phrase: XPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQYGSFCTQLNRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKDFGGFNFSQILP
type: DOMAIN
name: Spike_S2_CoV
description: Spike glycoprotein S2, coronavirus

phrase: SVYAWNRKRISNCVADYSVLXNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYRYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVC
type: DOMAIN
name: Spike_S1_RBD_bCoV
description: Spike (S) protein S1 subunit, receptor-binding domain, betacoronavirus

phrase: NKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCS
type: DOMAIN
name: CoV_S1_C
description: Coronavirus spike glycoprotein S1, C-terminal

phrase: NLCPFGEVFNATRFASVYAWNRKRISNCVADYSVLXNSASFSTFKCYGVSPTKLNDLCFTNVYADSFVIRGDEVRQIAPGQTGKIADYNYKLPDDFTGCVIAWNSNNLDSKVGGNYNYRYRLFRKSNLKPFERDISTEIYQAGSTPCNGVEGFNCYFPLQSYGFQPTNGVGYQPYRVVVLSFELLHAPATVCG
type: DOMAIN
name: Spike_S1_RBD_bCoV
description: Spike (S) protein S1 subunit, receptor-binding domain, betacoronavirus
Protein sequence:
MERTFLMIKPDAVQRNLIGEIISRIEKKGLKLVGGKFMQVPMELAEKHYSEHEGKPFYDKLISFITSAPVFAMVVEGENAVAVSRKIIGSTNPSEAAPGTIRGDYGLNLGRNIIHGSDSTESAQREVKLWFTSSEIADYKEPREDWLYE

Annotated regions:
phrase: MERTFLMIKPDAVQRNLIGEIISRIEKKGLKLVGGKFMQVPMELAEKHYSEHEGKPFYDKLISFITSAPVFAMVVEGENAVAVSRKIIGSTNPSEAAPGTIRGDYGLNLGRNIIHGSDSTESAQREVKLWFTSSEIA
type: DOMAIN
name: NDK-like_dom
description: Nucleoside diphosphate kinase-like domain

phrase: ERTFLMIKPDAVQRNLIGEIISRIEKKGLKLVGGKFMQVPMELAEKHYSEHEGKPFYDKLISFITSAPVFAMVVEGENAVAVSRKIIGSTNPSEAAPGTIRGDYGLNLGRNIIHGSDSTESAQREVKLWFTSSE
type: DOMAIN
name: NDK-like_dom
description: Nucleoside diphosphate kinase-like domain
Protein sequence:
MEKSWFNSMLSKGEVEYRCGLSKSMDSLGPIENTSISEDPVINDPDKNIYNSIWGESSSYYSNVDHLVGAKDIRNFISDDTFLVRDSNRDSYSIYFDIENNNFEIDNDHSFLSELESFFYSYRNSSYMNNRSKSDDPHYDPYMYDTKYSWTNHINSCIDSYLRSQICIDSSILSGSDNYNDSYIYNYICSESGKSSESENSNIRTNTNRSDLTIKESSNDLDITQKYRHLWVQCENCYGLNYKKFLKSKMNICEQCGYYLKMSSSDRIELLVDPGTWNPMDENMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEAVQTGTGQLNGIPIALGVMDFQFMGGSMGSVVGEKITRLIEYATNEFLPLIIVCASGGARMQEGSLSLMQMAKISSALYDYQSNKKLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKRVIEQTLNKTVPEGSQAAEYLFHKGLFDSIVPRNPLKGVLSELFQLHGFFPLNQNSIK

Annotated regions:
phrase: LWVQCENCYGLNYKKFLKSKMNICEQCGYYLKMSSSDRIELLVDPGTWNPMDENMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEAVQTGTGQLNGIPIALGVMDFQFMGGSMGSVVGEKITRLIEYATNEFLPLIIVCASGGARMQEGSLSLMQMAKISSALYDYQSNKKLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKRVIEQTLNKTVPEGSQAAEYLFHKGLFDSIVPRNPLKGVLSELFQLHGFFPLNQNSI
type: DOMAIN
name: COA_CT_N
description: Acetyl-coenzyme A carboxyltransferase, N-terminal

phrase: DENMVSLDPIEFHSEEEPYKDRIDSYQRKTGLTEAVQTGTGQLNGIPIALGVMDFQFMGGSMGSVVGEKITRLIEYATNEFLPLIIVCASGGARMQEGSLSLMQMAKISSALYDYQSNKKLFYVSILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKRVIEQTLNKTV
type: DOMAIN
name: AcCoA_carboxyl_beta
description: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta
Protein sequence:
MATSASSHLNKGIKQMYMNLPQGEKIQLMYIWVDGTGEGLRCKTRTLDCDPKCVEELPEWNFDGSSTFQSEGSNSDMYLHPVAMFRDPFRRDPNKLVFCEVFKYNRKPAETNLRHSCKRIMDMVSSQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGIKITGTNAEVMPAQWEFQIGPCEGIRMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLRCIEEAIDKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVANRSASIRIPRIVGQEKKGYFEDRRPSANCDPYAVTEAIVRTCLLNETGDEPFQYKN

Annotated regions:
phrase: LRHSCKRIMDMVSSQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGIKITGTNAEVMPAQWEFQIGPCEGIRMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLRCIEEAIDKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVANRSASIRIPRIVGQEKKGYFEDRRPSANCDPYAVTEAIVRTCLLNETGDEPFQYK
type: DOMAIN
name: Gln_synth_cat_dom
description: Glutamine synthetase, catalytic domain

phrase: ETNLRHSCKRIMDMVSSQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGIKITGTNAEVMPAQWEFQIGPCEGIRMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENGLRCIEEAIDKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVANRSASIRIPRIVGQEKKGYFEDRRPSANCDPYAVTEAIVRT
type: DOMAIN
name: Gln_synth_cat_dom
description: Glutamine synthetase, catalytic domain

phrase: KPIPGNWNGAGCHTNF
type: CONSERVED_SITE
name: Gln_synth_gly_rich_site
description: Glutamine synthetase, glycine-rich site

phrase: EKIQLMYIWVDGTGEGLRCKTRTLDCDPKCVEELPEWNFDGSSTFQSEGSNSDMYLHPVAMFRDPFRRDPNKLVFCEVFKYN
type: DOMAIN
name: Gln_synt_N
description: Glutamine synthetase, N-terminal domain

phrase: KRIMDMVSSQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADKAYGRDIVEAHYRACLYAGIKITGTNAEVMPAQWEFQIGPCEGIRMGDHLWVARFILHRVCEDFGVIATFDPKPIPGNWNGAGCHTNFSTKAMREENG
type: DOMAIN
name: Gln_synth_cat_dom
description: Glutamine synthetase, catalytic domain

phrase: LMYIWVDGTGEGLRCKTRTLDCDPKCVEELPEWNFDGSSTFQSEGSNSDMYLHPVAMFRDPFRRDPNKLVFCEVF
type: DOMAIN
name: Gln_synt_N
description: Glutamine synthetase, N-terminal domain

phrase: FDGSSTFQSEGSNSDMY
type: CONSERVED_SITE
name: Gln_synth_N_conserv_site
description: Glutamine synthetase, N-terminal conserved site
Protein sequence:
MAYVSMKQMLETGVHFGHQTRRWNPKMRPFIFGARNGIHIIDLQQTVKMFRVAHDKVVDTVANGGRVMFIGTKRQAQEAVATEAGRAGQFYVTNRWMGGTLTNFFTIQKSIDRLKKLEAMFADGTVNRYQKKEILRLQREMDKLLATLGGIKDMDKLPQLAFVIDPHREDIAIKECRKLGIPIVAVTDTNCDPDLIDFVIPGNDDAIRAIKLFVAAIADACLEGDALRKERKGQDAEEELKKASEPKAAEAAAE

Annotated regions:
phrase: MKQMLETGVHF
type: CONSERVED_SITE
name: Ribosomal_uS2_CS
description: Small ribosomal subunit protein uS2, conserved site
Protein sequence:
MAAAAVARLWWRGILGASALTRGTGRPSVLLLPVRRESAGADTRPTVRPRNDVAHKQLSAFGEYVAEILPKYVQQVQVSCFNELEVCIHPDGVIPVLTFLRDHTNAQFKSLVDLTAVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPIESAVSVFKAANWYEREIWDMFGVFFANHPDLRRILTDYGFEGHPFRKDFPLSGYVELRYDDEVKRVVAEPVELAQEFRKFDLNSPWEAFPVYRQPPESLKLEAGDKKPDAK

Annotated regions:
phrase: EREIWDMFGVFFANHPDLRRI
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_CS
description: NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site

phrase: CIHPDGVIPVLTFLRDHTNAQFKSLVDLTAVDVPTRQNRFEIVYNLLSLRFNSRIRVKTYTDELTPIESAVSVFKAANWYEREIWDMFGVFFANHPDLRRILTDYGFEGHPFRKDFPLSG
type: DOMAIN
name: NADH_UbQ_OxRdtase_30kDa_su
description: NADH:ubiquinone oxidoreductase, 30kDa subunit
Protein sequence:
MIYLGYFLFLFCGLTRVMASYPIWWSLAVGHQYTSLGTQPIMCSSIPGLVPKQLRFCRNYVEIMPSVAEGVKIGIQECQHQFRGRRWNCTTINDKLAIFGPVLDKEKERKIGFKQAKATRESAFVHAIASAGVAFXVTRACTEGSATICGCDSRRKGPPGEGWKWGGCSEDVEFGSMVSREFADARENRPDARSAMNRHNNEAGRSSITDHMYLKCKCHGLSGSCEVKTCWWSQPDFRVIGDYMKDKYDSASEMVVEKHRESRGWVETLRPKYPYYKPPTETDLVYYESSPNFCEPNPETGSFGTRDRTCNLTSHGIDGCDLLCCGRGHNTRTEKRKEKCHCIFHWCCYVSCQECTRVYDVHTCK

Annotated regions:
phrase: CKCHGLSGS
type: CONSERVED_SITE
name: Wnt_CS
description: Wnt protein, conserved site
Protein sequence:
MSLPNCPKCQSEYVYEDGILLVCPECAYEWNPAEVEKEEGLVVIDANGKQLADGDTVTLIKDLKVKGAPKDLKQGTRVKNIRLVEGDHNIDCKIDGFGAMKLKSEFVKKL

Annotated regions:
phrase: SLPNCPKCQSEYVYEDGILLVCPECAYEW
type: DOMAIN
name: YjdM_N
description: Protein YjdM, N-terminal

phrase: IDANGKQLADGDTVTLIKDLKVKGAPKDLKQGTRVKNIRLVEGDHNIDCKIDGFGAMKLKSEFVK
type: DOMAIN
name: YjdM_C
description: Protein YjdM, C-terminal
Protein sequence:
MGIKFLEVIKPFCAVLPEIQKPERKIQFREKVLWTAITLFIFLVCCQIPLFGIMSSDSADPFYWMRVILASNRGTLMELGISPIVTSGLIMQLLAGAKIIEVGDTPKDRALFNGAQKLFGMIITIGQSIVYVMTGMYGDPSEMGAGICLLIIIQLFVAGLIVLLLDELLQKGYGLGSGISLFIATNICETIVWKAFSPTTVNTGRGTEFEGAIIALFHLLATRTDKVRALREAFYRQNLPNLLNLIATVFVFAVVIYFQGFRVDLPIKSARYRGQYNTYPIKLFYTSNIPIILQSALVSNLYVISQMLSTRFSGNFLVNLLGTWSDTSTGGPARAYPVGGLCYFLSPPESFGSVLDDPIHAAIYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMGGHRETSMVHELNRYIPTAAAFGGLCIGGLSVMADFLGAIGSGTGILLAVTIIYQYFEIFVKEQSEMGSMGALLF

Annotated regions:
phrase: LLDELLQKGYGLGSGISL
type: CONSERVED_SITE
name: SecY_CS
description: SecY conserved site

phrase: TLMELGISPIVTSGLIMQL
type: CONSERVED_SITE
name: SecY_CS
description: SecY conserved site

phrase: FIFLVCCQIPLFGIMSSDSADPFYWMRVILASNR
type: DOMAIN
name: Translocon_Sec61/SecY_plug_dom
description: Translocon Sec61/SecY, plug domain
Protein sequence:
MTNIEDKDWSRSEGDSWDIVSSVGFTALGVAAARAVENREADPLVRDPYAEHFVRAAGEPHLIGLLDSSEPKPPNPGTAPRHIGLRSKFFDEFFINATNSGCKQAVILAAGLDVRAHRLPWPAGTKVFELDQPQVLEFKDRVLAEHDATPTSDRREIAVDLRDDWPAALLAAGFDPEVPTAWSAEGLIIYLPSAAQDLLFERVVALSAPGSQVAVEATRGRPDIAKWGEMQKKYADEGHPMSKVDITTLFYDEERADVAEWLAARGWKVQGSHALELAAAYGVEIPELPEDVVEVVKQGNYVTAVLPS

Annotated regions:
Protein sequence:
MAQINVIGQNGGRSIDLDLPEVNPHVLHEVVTWQLAGRRRGTASTKTRAEVSRSGKKMYSQKGTGNARHGDRSVPTFVGGGVAFGPKPRSYSYTLPRKVRQLGLAMALADRQQQGKLTAVDGFGLDGKTKSFVSWAKENGLDGSERVLIVTDDELTRRAARNVAWATVLPVAGLNVYDILRHERLVIDAVALEPAQELETVPAEGNVQEGAAL

Annotated regions:
Protein sequence:
MSAERLVNPHSDSDDQQVEKSLRPRTLSEFIGQEKVVEQLRIAIAAARGRNESLDHTLFYGPPGLGKTSLANVVANEMGAKIKITSGPAIERAGDLAAILTNLQANDVLFIDEVHRLNRAVEEVLYPAMEDFALDLVVGKGPGARSLRLNLPRFTVIGATTRLALLTSPLRDRFVAVHRLVFYSDDAMTEIVSRSARILGVPISPEGAREIGRRARGTPRIANRILRRVRDYAQVVADGAITLQVARDALAQLEIDELGLDENDRRLLRAIIELFNGGPVGLSTLAAALAEEVDAIEDVYEPFLLQLGFLQRTPRGRIATRRAYEHLGLPYPERTLPADDESGPQQATLF

Annotated regions:
phrase: SLDHTLFYGPPGLGKTSLANVVANEMGAKIKITSGPAIERAGDLAAILTNLQANDVLFIDEVHRLNRAVEEVLYPAMEDFALDLVVGKGPGARSLRLNLPRFTVIGATTRLALLTSPLRDRFVAVHR
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LRPRTLSEFIGQEKVVEQLRIAIAAARGRNESLDHTLFYGPPGLGKTSLANVVANEMGAKIKITSGPAIERAGDLAAILTNLQANDVLFIDEVHRLNRAVEEVLYPAMEDFALDLVVGKGPGARSLRLNLPRFTVIGATTRLALLTSPLRDRFVAVHR
type: DOMAIN
name: RuvB-like_N
description: RuvB-like P-loop domain

phrase: YSDDAMTEIVSRSARILGVPISPEGAREIGRRARGTPRIANRILRRVRDYAQVVADGAITLQVARDALAQLEI
type: DOMAIN
name: AAA_lid_4
description: RuvB, AAA lid domain

phrase: ELGLDENDRRLLRAIIELFNGGPVGLSTLAAALAEEVDAIEDVYEPFLLQLGFLQRTPRGRIATRRAYEH
type: DOMAIN
name: RuvB_C
description: RuvB C-terminal winged helix domain
Protein sequence:
MPDPSTYRPAPGSIPVEPGVYRFRDPHGRVIYVGKAKSLRSRLNSYFADLSGLAPRTRQMVMTAAKVEWTVVNTEVEALQLEYNWIKEFDPRFNIRYRDDKSYPVLAVTLNEEFPRLKVYRGPRKKGVRYFGPYSHAWAIRETVDLLTRVFPARTCSAGVFKRHNQIDRPCLLGYIDKCSAPCVGRVSAEQHRQIVLDFCDFLAGKTDRLVRDLERKMTAAAEDLDFERAARLRDDIGALRRALEKQTVVFGDGTDADVVAFADDDLEAAVQVFHVRGGRVRGQRGWIVEKSGEPGESGEGQLVEQFLTQFYGDQAELGSAGDNAGDSGQDEATNPVPRQVLVPCLPDNADELTEWLSQLRGSRVALRVPQRGDKKALFETVQRNAKEALAQHKLKRAGDFTARTAALQSIQDTLGLADAPLRIECIDISHVQGTDVVASLVVFEDGLPRKSDYRHYAIREAAGDGRSDDVASIAEVTRRRFYRHLHDTQHPTELSAEGKSRKFAYPPNLFVVDGGAPQVNAAQAVLDELGISDVAVIGLAKRLEEVWVPSGSDLGPEPIILPRNSEGLYLLQRVRDEAHRFAITYHRSKRSKRMTASALDSVRGLGEHRRKALVTHFGSVARLKEASVEEITAVPGIGVTTARAVLEALGVPQAAPADSDTAAAVIDDDQRRVTG

Annotated regions:
phrase: DRLVRDLERKMTAAAEDLDFERAARLRDDIGALRR
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: DRLVRDLERKMTAAAEDLDFERAARLRDDIGALR
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: PGVYRFRDPHGRVIYVGKAKSLRSRLNSYFADLSGLAPRTRQMVMTAAKVEWTVVNTEVEALQLEYNWIKEFD
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: VEPGVYRFRDPHGRVIYVGKAKSLRSRLNSYFADLSGLAPRTRQMVMTAAKVEWTVVNTEVEALQLEYNWIKEFDPRFN
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: VVAFADDDLEAAVQVFHVRGGRVRGQRGWIVEKSGEPGESGEGQLVEQFLTQFYGDQAELGSAGDNAGDSGQDEATNPVPRQVLVPCLPDNADELTEWLSQLRGSRVALRVPQRGDKKALFETVQRNAKEALAQHKLKRAGDFTARTAALQSIQDTLGLADAPLRIECIDISHVQGTDVVASLVVFEDGLPRKSDYRHYAIREAAGDGRSDDVASIAEVTRRRFYRHLHDTQHPTELSAEGKSRKFAYPPNLFVVDGGAPQVNAAQAV
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: SALDSVRGLGEHRRKALVT
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: EEITAVPGIGVTTARAVLE
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: QDTLGLADAPLRIECIDISHVQGTDVVASLVVFEDGLPRKSDYRHYAIREAAGDGRSDDVASIAEVTRRRFYRHLHDTQHPTELSAEGKSRKFAYPPNLFVVDGGAPQVNAAQAVLDELGISDVAVIGLAKRLEEVWVPSGSDLGPEPIILPRNSEGLYLLQRVRDEAHRFA
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: EPGVYRFRDPHGRVIYVGKAKSLRSRLNSYFADLSGLAPRTRQMVMTAAKVEWTVVNTEVEALQLEYNWIKEFDPRFNIRYR
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: IPVEPGVYRFRDPHGRVIYVGKAKSLRSRLNSYFADLSGLAPRTRQMVMTAAKVEWTVVNTEVEALQLEYNWIKEFDPRFN
type: DOMAIN
name: GIY-YIG_UvrC_Cho
description: UvrC/Cho-like, GIY-YIG domain
Protein sequence:
MTRTVKRDENAYARLGWLLVLFGFGGALLWAAFAPLDQGVAVPATVIISGQRKSVQHPLGGVVKHILVRDGQHVEAGEPLIRMEPTQARANVDSLLNRYANARLNQARLQAEYDGRRTLEMPAGLAEQAPLPTLGERLELQRQLLHSRQTALANELSALRANIEGLRAQLEGLRQTEGNQRLQQRLLNSQLSGARDLAEEGYMPRNQLLEQERQLAEVNARLSESSGRFGQIRQSIAEAQMRIAQREEEYRKEVNGQLAETQVNARTLWEELSSARYELRHAEIRAPVSGYVAGLKVFTDGGVIGPGELLMYIVPNSDSLEVEGQLAVNLVDRIHSGLPVEMLFTAFNQSKTPRVTGEVTMVSADRLLDEQNKQPYYALRAQVDAAAMGKLKGLQIRPGMAVQVFVRTGERSLLNYLFKPLFDRAHVALAEN

Annotated regions:
phrase: GFGGALLWAAFAPLDQGVAVPATVIISGQRKSVQHPLGGVVKHILVRDGQHVEAGEPLIRMEPTQARANVDSLLNRYANARLNQARLQAEYDGRRTLEMPAGLAEQAPLPTLGERLELQRQLLHSRQTALANELSALRANIEGLRAQLEGLRQTEGNQRLQQRLLNSQLSGARDLAEEGYMPRNQLLEQERQLAEVNARLSESSGRFGQIRQSIAEAQMRIAQREEEYRKEVNGQLAETQVNARTLWEELSSARYELRHAEIRAPVSGYVAGLKVFTDGGVIGPGELLMYIVPNSDSLEVEGQLAVNLVDRIHSGLPVEMLFTAFNQSKTPRVTGEVTMVSADRLLDEQNKQPYYALRAQVDAAA
type: DOMAIN
name: CusB-like_dom_1
description: Cation efflux system protein CusB-like, domain 1

phrase: VQHPLGGVVKHILVRDGQHVEAGEPLIRMEPTQ
type: DOMAIN
name: MFP_biotin_lipoyl_2
description: Membrane fusion protein, biotin-lipoyl like domain

phrase: IRPGMAVQVFVRTGERSLLNYL
type: CONSERVED_SITE
name: Secretion_HlyD_CS
description: Secretion protein HlyD, conserved site
Protein sequence:
MIEIEKVCVDFTAGRGTPTRAVDDVSLHIAAGEIFGIVGTSGAGKSTLLRTLNALTRPSQGRVNVNGVEISALDGKALRQARQRIGMIFQHFNLMHTRTVAKNVAFSLKAAGWERSKIAPRVAEILTLVGLADKANCFPVQLSGGQKQRVGIARAIANHPDVLLCDEPTSALDLETSATILALLRQINAQLGITIVLITHEMNVIKSICDRVAVMSGGKVVESGEVFDVFAHPQHAFTQQLVSHTLNLTLPERLREHLPGQLLKILFIGDSAEQPVLSEVAIKFGVAVNILHGKIEYIGERALGILVVQLTAPHNPTAVAAAVEHIRQRTAQVEVIRG

Annotated regions:
phrase: PGQLLKILFIGDSAEQPVLSEVAIKFGVAVNILHGKIEYIGERALGILVVQLTAPHNPTAVAAAVEHIRQRTAQVEV
type: DOMAIN
name: NIL_domain
description: NIL domain

phrase: DDVSLHIAAGEIFGIVGTSGAGKSTLLRTLNALTRPSQGRVNVNGVEISALDGKALRQARQRIGMIFQHFNLMHTRTVAKNVAFSLKAAGWERSKIAPRVAEILTLVGLADKANCFPVQLSGGQKQRVGIARAIANHPDVLLCDEPT
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: MIEIEKVCVDFTAGRGTPTRAVDDVSLHIAAGEIFGIVGTSGAGKSTLLRTLNALTRPSQGRVNVNGVEISALDGKALRQARQRIGMIFQHFNLMHTRTVAKNVAFSLKAAGWERSKIAPRVAEILTLVGLADKANCFPVQLSGGQKQRVGIARAIANHPDVLLCDEPTSALDLETSATILALLRQINAQLGITIVLITHEMNVIKSICDRVAVMSGGKVVESGEVFDVFAHP
type: DOMAIN
name: MetN_ABC
description: Methionine import ATP-binding protein MetN, ATP-binding domain

phrase: AGEIFGIVGTSGAGKSTLLRTLNALTRPSQGRVNVNGVEISALDGKALRQARQRIGMIFQHFNLMHTRTVAKNVAFSLKAAGWERSKIAPRVAEILTLVGLADKANCFPVQLSGGQKQRVGIARAIANHPDVLLCDEPTSALDLETSATILALLRQINAQLGITIVLITHEMNVIKSICDRVAVMSGGKVVESGEV
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: QLLKILFIGDSAEQPVLSEVAIKFGVAVNILHGKIEYIGERALGILVVQLTAPHNPTAVAAAVEHIRQRTAQVE
type: DOMAIN
name: NIL_domain
description: NIL domain

phrase: LSGGQKQRVGIARA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: IEIEKVCVDFTAGRGTPTRAVDDVSLHIAAGEIFGIVGTSGAGKSTLLRTLNALTRPSQGRVNVNGVEISALDGKALRQARQRIGMIFQHFNLMHTRTVAKNVAFSLKAAGWERSKIAPRVAEILTLVGLADKANCFPVQLSGGQKQRVGIARAIANHPDVLLCDEPTSALDLETSATILALLRQINAQLGITIVLITHEMNVIKSICDRVAVMSGGKVVESGEVFDVFAHPQHAFTQQL
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain
Protein sequence:
MTKPSIYDITPEKWPSAVAEMGLKSFSARQIQEWLYQKHVSTFEEMTNLAKTTRELLAETYDIPGMTVADEQLATDGTHKFAWALADGQKIESVLIPSDFESLNDRSLGVAGGGVNPKRRTLCISTQAGCAMGCTFCRTATMGLMRNLTHGEIVGQIVEVNRRIHNTIGPITNIVLMGMGEPLANYSNMVQALRTMYSPHGLKITQRKITLSTVGIAPAIKRLADEPNMHVKLALSLHAVNDEIRKTLIPMANRYPMQEIMDACRYYVEKHPRDRVTFEYLLIAGVNDRKSDADGLAKLIAHIPAKVNLIPFNPFPGNSWERPSDEVISQFSEWVHAKHIQVNIRVSRGREILAACGQLAQESSRKNVTEMSF

Annotated regions:
phrase: DITPEKWPSAVAEMGLKSFSARQIQEWLYQKHVSTFEEMTNLAKTTRELLAETY
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: NPKRRTLCISTQAGCAMGCTFCRTATMGLMRNLTHGEIVGQIVEVNRRIHNTIGPITNIVLMGMGEPLANYSNMVQALRTMYSPHGLKITQRKITLSTVGIAPAIKRLADEPNMHVKLALSLHAVNDEIRKTLIPMANRYPMQEIMDACRYYVEKHPRDRVTFEYLLIAGVNDRKSDADGLAKLIAHIPAKVNLIPFNPFPGNSWERPSDEVISQFSEWVHAKHIQVNI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: ISTQAGCAMGCTFCRTATMGLMRNLTHGEIVGQIVEVNRRIHNTIGPITNIVLMGMGEPLANYSNMVQALRTMYSPHGLKITQRKITLSTVGIAPAIKRLADEPNMHVKLALSLHAVNDEIRKTLIPMANRYPMQEIMDACRYYVEKHPRDRVTFEYLLIAGVND
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TKPSIYDITPEKWPSAVAEMGLKSFSARQIQEWLYQKHVSTFEEMTNLAKTTRELLAETYDIPGMTVADEQLATDGTHKFAWALADGQKIESVLIPSDFESLNDRSLGVAGGGVNPKRRTLCISTQAGCAMGCTFCRTATMGLMRNLTHGEIVGQIVEVNRRIHNTIGPITNIVLMGMGEPLANYSNMVQALRTMYSPHGLKITQRKITLSTVGIAPAIKRLADEPNMHVKLALSLHAVNDEIRKTLIPMANRYPMQEIMDACRYYVEKHPRDRVTFEYLLIAGVNDRKSDADGLAKLIAHIPAKVNLIPFNPFPGNSWERPSDEVISQFSEWVHAKHIQVNIRVSRGREILAACGQLAQESSRKN
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MGAQVSRQNVGTHSTQNTVANGSSLNYFNINYFKDAASNGASRLDFSQDPSKFTDPVKDVLIKGVPTLQSPTVEACGYSDRIIQITRGNSTITSQDIANAVVAYGVWPHYLSDTDANAIDKPSHPDTSSDRFYTLDSKLWSNESKGWWWKLPDALKDMGIFGENMFYHFLGRTGYTIHVQCNASKFHQGTLIVAAIPEHQLAFIGKGNVSVGYRHTHPGENGRTLNGSRTDGNSKQPTEESWLNCDGTLLGNITIYPHQFINLRSNNSATLILPYVNAVPMDSMLRHNNWSLVIIPISPLVSESSDKVPITISISPMCSEFSGARNQSAKIQGLPVMLTPGSAQFLTTDDTQSPSALPYFHPTKEIFIPGKVSNLSEICQVDSMIPVNNTIPVNNSIGMYTVEVRVQTDFKQEIFAIPVDVASQPLSTTLIGEIASYYTHWTGSLRFSFMFCGTANTSLKLLIAYTPPGVDKPTTRTKAMLGTHVVWDVGLQSTVSMVVPWISASHYRFTTPDTYSQAGYITCWYQTNFVTPPSTPKHADIICFVSGCKDFCLRMARDTNLHSQTVNITQNPVEKYTEALLNEVLVVPNIQPSSGHTSNAAPALDAAETGHTSQVQPEDVIETRSVITDQTRDEMSVESFLGRSACIAIIHTNLEHDETDRQVYNAQKKNFSTWKITLKEMAQIRRKCELFTYLRFDSEITIVATIAGQGDDIGHIVLQYMYVPPGGPVPLTRKDDEWQSGTNASVFWQHGQPYPRFTIPFVSIASAY

Annotated regions:
phrase: PDTSSDRFYTLDSKLWSNESKGWWWKLPDALKDMGIFGENMFYHFLGRTGYTIHVQCNASKFHQGTLIVAAIPEHQLAFIGKGNVSVGYRHTHPGENGRTLNGSRTDGNSKQPTEESWLNCDGTLLGNITIYPHQFINLRSNNSATLILPYVNAVPMDSMLRHNNWSLVIIPISPLVSESSDKVPITISISPMCSEFSGAR
type: DOMAIN
name: Rhv-like
description: Picornavirus/Calicivirus coat protein

phrase: VESFLGRSACIAIIHTNLEHDETDRQVYNAQKKNFSTWKITLKEMAQIRRKCELFTYLRFDSEITIVATIAGQGDDIGHIVLQYMYVPPGGPVPLTRKDDEWQSGTNASVFWQHGQPYPRFTIPFVSIASA
type: DOMAIN
name: Rhv-like
description: Picornavirus/Calicivirus coat protein

phrase: LSEICQVDSMIPVNNTIPVNNSIGMYTVEVRVQTDFKQEIFAIPVDVASQPLSTTLIGEIASYYTHWTGSLRFSFMFCGTANTSLKLLIAYTPPGVDKPTTRTKAMLGTHVVWDVGLQSTVSMVVPWISASHYRFTTPDTYSQAGYITCWYQTNFVTPPSTPKHADIICFVSGCKDFCLRMARDT
type: DOMAIN
name: Rhv-like
description: Picornavirus/Calicivirus coat protein

phrase: EDVIETRSVITDQTRDEMSVESFLGRSACIAIIHTNLEHDETDRQVYNAQKKNFSTWKITLKEMAQIRRKCELFTYLRFDSEITIVATIAGQGDDIGHIVLQYMYVPPGGPVPLTRKDDEWQSGTNASVFWQHGQPYPRFTIPFVSIASA
type: DOMAIN
name: Picornavirus_capsid
description: Picornavirus capsid

phrase: HPTKEIFIPGKVSNLSEICQVDSMIPVNNTIPVNNSIGMYTVEVRVQTDFKQEIFAIPVDVASQPLSTTLIGEIASYYTHWTGSLRFSFMFCGTANTSLKLLIAYTPPGVDKPTTRTKAMLGTHVVWDVGLQSTVSMVVPWISASHYRFTTPDTYSQAGYITCW
type: DOMAIN
name: Picornavirus_capsid
description: Picornavirus capsid

phrase: TSQDIANAVVAYGVWPHYLSDTDANAIDKPSHPDTSSDRFYTLDSKLWSNESKGWWWKLPDALKDMGIFGENMFYHFLGRTGYTIHVQCNASKFHQGTLIVAAIPEHQLAFIGKGNVSVGYRHTHPGENGRTLNGSRTDGNSKQPTEESWLNCDGTLLGNITIYPHQFINLRSNNSATLILPYVNAVPMDSMLRHNNWSLVIIPISP
type: DOMAIN
name: Picornavirus_capsid
description: Picornavirus capsid
Protein sequence:
MDYNSKTSTGGRNMAGARALWRATGMTDGDFGKPIIAIANSFTQFVPGHVHLKDLGQMVAREIEKAGGVAKEFNTIAVDDGIAMGHSGMLYSLPSRDLIADSVEYMVNAHCADALVCISNCDKITPGMLMAALRLNIPVVFISGGPMEAGKILASTVGKSHNNEDSSGGAIRKLDLVDAMMDAADDSISDEDVAAIEASACPTCGSCSGMFTANSMNCLTEALGLALPGNGSLLATHSLRRELFLEAGRTIVSLAKRRYEQDDDSVLPRSIATKAAFENAMTLDIAMGGSTNTILHLLAAANEAEVDFKMHDIDRLSRGVPCLAKVAPASQKYHMEDVHRAGGVFALLAELDRAGLLNTDLPTIHSATMKEAIDKWDIMNPDNLEARARYIAAPGGVRTTEAFSQSKEWSNLDVNRESGCIRSAQHAYSEDGGLAVLYGNIAERGCVVKTAGVDDSILVFTGRARIFESQDDAVAAVLDDQIVAGDVVIIRFEGPKGGPGMQEMLYPTTYLKSKGLGKECALLTDGRFSGGTSGLSIGHASPEAAEGGAIGLVQEGDTIHIDIPNRTINMQVSDEELAARREEMDSRGRDAWKPVSRDRHVSPALRAYAAMTTSADTGAVRDVSQVER

Annotated regions:
phrase: CDKITPGMLM
type: CONSERVED_SITE
name: DiOHA_6PGluconate_deHydtase_CS
description: Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site

phrase: KPIIAIANSFTQFVPGHVHLKDLGQMVAREIEKAGGVAKEFNTIAVDDGIAMGHSGMLYSLPSRDLIADSVEYMVNAHCADALVCISNCDKITPGMLMAALRLNIPVVFISGGPMEAGKILASTVGKSHNNEDSSGGAIRKLDLVDAMMDAADDSISDEDVAAIEASACPTCGSCSGMFTANSMNCLTEALGLALPGNGSLLATHSLRRELFLEAGRTIVSLAKRRYEQDDDSVLPRSIATKAAFENAMTLDIAMGGSTNTILHLLAAANEAEVDFKMHDIDRLSRGVPCLAKVAPASQKYHMEDVHRAGGVFALLAELDRAGLLNTDLPTIHSATMK
type: DOMAIN
name: ILV_EDD_N
description: Dihydroxy-acid/6-phosphogluconate dehydratase, N-terminal

phrase: CIRSAQHAYSEDGGLAVLYGNIAERGCVVKTAGVDDSILVFTGRARIFESQDDAVAAVLDDQIVAGDVVIIRFEGPKGGPGMQEMLYPTTYLKSKGLGKECALLTDGRFSGGTSGLSIGHASPEAAEGGAIGLVQEGDTIHIDIPNRTINMQVSDEELAARREEMDSRGRDAWKPVSRDRHVSPALRAYAAMTTSADTG
type: DOMAIN
name: ILV_EDD_C
description: Dihydroxy-acid/6-phosphogluconate dehydratase, C-terminal

phrase: ALLTDGRFSGG
type: CONSERVED_SITE
name: DiOHA_6PGluconate_deHydtase_CS
description: Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site
Protein sequence:
MRSRTPKVLHPVAGRPMLHLVLDALAAAGFDRRVVVAARADDEVAEASRSRAPIAVQDAPLGTGHAVLAAHEAAGDAERLLIVNGDLPLLTAATLAALADAHCAERAALSFLTVEVDDPTGYGRIVRDGEGDRIAGIVEEADTDEQTRAIPEVNAGVYTAEAAWLWSALEALAPAPNGEIYLTDAVRAAASSGCRVHAQRLGDATEAQQVNTRAELAAADTAMRDRIRAALMASGVTLVGPETIYVDAGVAVGEDTTLLPGTHLMGDTVVGGECEIGPNAVLRDMRVGNRCTIGGSTLEGSTVADGVDIGAYCRVRPGSVIEADVHLGTYAEVKASRIGARTQIGHFSYTGDADVGEDVNIGAGAITANYDGTSKHRTEIGDGAFIGSDTMMIAPVRVGAGARTAAGAVVTHDVPDGAQVIGAPARIRDAAGDTTESLQREEQ

Annotated regions:
phrase: RSRTPKVLHPVAGRPMLHLVLDALAAAGFDRRVVVAARADDEVAEASRSRAPIAVQDAPLGTGHAVLAAHEAAGDAERLLIVNGDLPLLTAATLAALADAHCAERAALS
type: DOMAIN
name: MobA-like_NTP_Trfase
description: MobA-like NTP transferase

phrase: TEIGDGAFIGSDTMMIAPVRVGAGARTAAGAVVT
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: RVGNRCTIGGSTLEGSTVADGVDIGAYCRVRPGSV
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: GVTLVGPETIYVDAGVAVGEDTTLLPGTHLMGDTVVGGECEIGPNAVLRDMRVGNRCTIGGSTLEGSTVADGVDIGAYCRVRPGSVIEADVHLGTYAEVKASRIGARTQIGHFSYTGDADVGEDVNIGAGAITANYDGTSKHRTEIGDGAFIGSDTMMIAPVRVGAGARTAAGAVVTHDVPDGAQVI
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain
Protein sequence:
MSKEIPTPYMWSYQPQMGLAAGAAQDYSTRINYMSAGPHMISRVNGIRAHRNRILLEQAAITTTPRNNLNPRSWPAALVYQESPAPTTVVLPRDAQAEVQMTNSGAQLAGGFRHRVRSPGQGITHLTIRGRGIQLNDESVSSSLGLRPDGTFQIGGAGRPSFTPRQAILTLQTSSSEPRSGGIGTLQFIEEFVPSVYFNPFSGPPGHYPDQFIPNFDAVKDSADGYD

Annotated regions: