nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MLVIPAIDLKDGVCVRLEQGLMDRDTVFNDNPASQALEWQNQGAELLHIVDLDGAFAGTPRNKAAIEAIVKAISIPAQLGGGIRDLATIESYLSLGLSRVIIGTAAQRNPQLVKEACAKFPGRIVVGIDAKAGMVAVQGWAEVTGITAVDLARKFEDCGVAAIIYTDISRDGMLQGPNIEATRSLAEAVAIPVIASGGVSTLKDIENLMTIERSGVTGVITGKAIYTGAIRLHEAIALTGKDNQE

Annotated regions:
Protein sequence:
MTSASPSRSTAWLRVVTLAIAAFIFNTTEFIPVGLLSDIANSFAMKTEDVGLMITIYAWIVAVASLICMLLTSGIERRKLLIGLFSLFILSHLLSAVAWNFTVLVISRAGVALAHSVFWSITASLAIRMAPPGKRAQALGLIATGSSLAMVLGLPLGRVIGQYLGWRVTFLTIAAGATVAMILLARLLPLLPSEHSGSLGSVPKLFRRPALVGIYLLTVVVVTAHFTAYSYIEPFIQTVAGLPENFTTLILLLFGCAGIAGSMLYSRYSDRFPIGFLVTAMLLLLACLTLLMPLSGYPFGLTLLCLVWGLAMMSIGLAMQAKVLSLAPDASDVAMSIFSGLFNLGIGGGALLGSQVSLHLGMDKIGYVGAPLVLVALFATLLSVYRSVRLVHSRV

Annotated regions:
phrase: RVVTLAIAAFIFNTTEFIPVGLLSDIANSFAMKTEDVGLMITIYAWIVAVASLICMLLTSGIERRKLLIGLFSLFILSHLLSAVAWNFTVLVISRAGVALAHSVFWSITASLAIRMAPPGKRAQALGLIATGSSLAMVLGLPLGRVIGQYLGWRVTFLTIAAGATVAMILLARLLPLLPSEHSGSLGSVPKLFRRPALVGIYLLTVVVVTAHFTAYSYIEPFIQTVAGLPENFTTLILLLFGCAGIAGSMLYSRYSDRFPIGFLVTAMLLLLACLTLLMPLSGYPFGLTLLCLVWGLAMMSIGLAMQAKVLSLAPDASDVAMSIFSGLFNLGIGGGALLGSQVSLHLGMDKIGYVGAPLVLVALFATLLSVYRS
type: DOMAIN
name: MFS_dom
description: Major facilitator superfamily domain
Protein sequence:
MSTNHIQPLLDLLYQGKSLSREQAFEIFSALIRGEMSEATMAGMLVALKMRGETIDEISGAADAMRAAAKTFPYSNGDSLGNGIVDIVGTGGDGFNTINISTTAAFVAAAAGAKVAKHGNRSVSSKSGSSDLLAQFGIDLTMSPDTASRCLDALNLCFLFAPHYHGGVKHAGPVRQALKTRTLFNVLGPLINPARPEFMLLGVYSPELVLPIAKVLKALGTKRAMVVHGSGLDEVALHGNTQVAELKDGDIIEYQLTPADLGVPLAQISELEGGEPAQNALITEAILRGRGTDAHANAVAINAGCALYVCGIADSVKTGTLLALSTIQSGKAFELLSQLAKVSSETKE

Annotated regions:
phrase: GIVDIVGTGGDGFNTINISTTAAFVAAAAGAKVAKHGNRSVSSKSGSSDLLAQFGIDLTMSPDTASRCLDALNLCFLFAPHYHGGVKHAGPVRQALKTRTLFNVLGPLINPARPEFMLLGVYSPELVLPIAKVLKALGTKRAMVVHGSGLDEVALHGNTQVAELKDGDIIEYQLTPADLGVPLAQISELEGGEPAQNALITEAILRGRGTDAHANAVAINAGCALYVCGIADSVKTGTLLALSTIQSGK
type: DOMAIN
name: Glycosyl_Trfase_fam3
description: Glycosyl transferase, family 3

phrase: PLLDLLYQGKSLSREQAFEIFSALIRGEMSEATMAGMLVALKMRGETIDEISGAADAMRAA
type: DOMAIN
name: Glycosyl_Trfase_fam3_N_dom
description: Glycosyl transferase family 3, N-terminal domain
Protein sequence:
MSTIEAIYLVDTNGALLLQLESRGRTSPITLEHIKNELFRYKLRNEEPPFILHNKNFLIFQELEEDVRLCIPTTCDTEPLYIHDIMRRIVDVVKTFFGGFNASKVEKNVCVIVQLLAEMIDYGYATCMEPNALQDIVPLPSFMNKFMAVTGLQTNTPTLARDTVPWRTAKAKYATNEFFIHVLERVSAVYQPNGKLAFGTVKSDMECKCQISGMPLLLLSLRPGTKLGNVRFHQSVNLKRWKQHPDQIEFIPPDGKFTLASFQTDFATQKSLPVVVEAKNKLDGRFEVRIRNTGKKSVENLKILITIPQALKSVTVTEGNYIFRASKYTHMEEGILEWSVKKLAWTSPALVLTGFLAPLKKDANSTEESSSYSKLEHLDLQYKLQGSTLHNFKVESLKMLNHPDKKSYKGVKHTIIAQNVSFRFR

Annotated regions:
phrase: TNEFFIHVLERVSAVYQPNGKLAFGTVKSDMECKCQISGMPLLLLSLRPGTKLGNVRFHQSVNLKRWKQHPDQIEFIPPDGKFTLASFQTDFATQKSLPVVVEAKNKLDGRFEVRIRNTGKKSVENLKILITIPQALKSVTVTEGNYIFRASKYTHMEEGILEWSVKKLAWTSPALVLTGFLAPLKKDANSTEESSSYSKLEHLDLQYKLQGSTLHNFKVESLKMLNHPDKKSYKGVKHTIIAQNVSF
type: DOMAIN
name: MHD
description: Mu homology domain

phrase: VPWRTAKAKYATNEFFIHVLERVSAVYQPNGKLAFGTVKSDMECKCQISGMPLLLLSLRPGTKLGNVRFHQSVNLKRWKQHPDQIEFIPPDGKFTLASFQTDFATQKSLPVVVEAKNKLDGRFEVRIRNTGKKSVENLKILITIPQALKSVTVTEGNYIFRASKYTHMEEGILEWSVKKLAWTSPALVLTGFLAPLKKDANSTEESSSYSKLEHLDLQYKLQGSTLHNFKVESLKMLNHPDKKSYKGVKHTIIAQNVSF
type: DOMAIN
name: MHD
description: Mu homology domain
Protein sequence:
MGIPKEGEFVTIQSYKHDGHLHRTWRDTMVLKTSEYSLIGVNDHTLVTESDGRRWVTREPAIVYFHKKYWFNIIAMIREKGVSYYCNLASPYVLDDEALKYIDYDLDIKVFPDGEKRLLDVDEYEFHSKLMDYPEDIDFILKENVKTLVDWINNEKGPFSPEYVDIWYQRYQQLSKK

Annotated regions:
phrase: PAIVYFHKKYWFNIIAMIREKGVSYYCNLASPYVLDDEALKYIDYDLDIKVFPDGEKRLLDVDE
type: DOMAIN
name: DUF402
description: Domain of unknown function DUF402
Protein sequence:
MACQRHLLFLLLVLFAVSTQLSHGQHWSHGWYPGGKRELDMPASPEVSEEIKLCEGEECAYLRNPRKNLLKNILGRSNQKKNADVLARQLQKK

Annotated regions:
phrase: QHWSHGWYP
type: CONSERVED_SITE
name: GnRH
description: Gonadotropin-releasing hormone

phrase: QHWSHGWYP
type: CONSERVED_SITE
name: GnRH
description: Gonadotropin-releasing hormone
Protein sequence:
MRRQLRSRRAPAFPYGYRYRLDDQDEMNHNYLADEEEEAEEEAQVMMVPGLEEEEEEEEGKEEEEEREEEEGQGQSTGNAWWRKLQIVNEYLWDPEKRMSLARTGQSRSLILVIYFFFYASLAAVITLFIYMLFLAISPYMPTFTEQVKPPGVMIRPFAHSLNFNFNVSEPETWQRYVISLNGFLQGYNDSLQEEMNIDCPPGQYFIQDGDEDEDKKACQFKRSFLKNCSGLEDPTFGYSTGQPCILLKMNRIVGFRPEFGDPVKVSCKVQKGDENDIRSINYYPESASFDLRYYPYYGKLTHVNYTSPLVAMHFTDVVKNQEVPVQCQLKGKGIVNDVINDRFVGRIIFTLNIET

Annotated regions:
Protein sequence:
MSKLTALIQELVEPLLTPMGYELVDLQYGREGGRYILRLFIDRPEGIGLDDCEQVSRVVSALLDEKDPIPHSYYLEVSSPGLERPLKKEADFNRFAGRKVKLRTFAPINGQRHFQGRLLGYQDGQVRMHLEEGWDLAIPLEQVATARLVFDLADDEED

Annotated regions:
phrase: GLERPLKKEADFNRFAGRKVKLRTFAPINGQRHFQGRLLGYQDGQVRMHLEEGWDLAIPLEQVATARLVFD
type: DOMAIN
name: RimP_C
description: Ribosome maturation factor RimP, C-terminal

phrase: LKKEADFNRFAGRKVKLRTFAPINGQRHFQGRLLGYQDGQVRMHLEEGWDLAIPLEQVATARLV
type: DOMAIN
name: RimP_C
description: Ribosome maturation factor RimP, C-terminal

phrase: LVEPLLTPMGYELVDLQYGREGGRYILRLFIDRPEGIGLDDCEQVSRVVSALLDEKDPIPHSYYLEVSSPGL
type: DOMAIN
name: RimP_N
description: Ribosome maturation factor RimP, N-terminal
Protein sequence:
MKNSKAILQVPGTMKIISAEIPVPKEDEVLIKVEYVGICGSDVHGFESGPFIPPKDPNQEIGLGHECAGTVVAVGSRVRKFKPGDRVNIEPGVPCGHCRYCLEGKYNICPDVDFMATQPNYRGALTHYLCHPESFTYKLPDNMDTMEGALVEPAAVGMHAAMLADVKPGKKIIILGAGCIGLMTLQACKCLGATEIAVVDVLEKRLAMAEQLGATVVINGAKEDTIARCQQFTEDMGADIVFETAGSAVTVKQAPYLVMRGGKIMIVGTVPGDSAINFLKINREVTIQTVFRYANRYPVTIEAISSGRFDVKSMVTHIYDYRDVQQAFEESVNNKRDIIKGVIKISD

Annotated regions:
phrase: EDEVLIKVEYVGICGSDVHGFESGPFIPPKDPNQEIGLGHECAGTVVAVGSRVRKFKPGDRVNIEPGVPCGHCRYCLEGKYNICPDVDFMATQPNYRGALTHYLCHPESFTYKLP
type: DOMAIN
name: ADH-like_N
description: Alcohol dehydrogenase-like, N-terminal

phrase: QVPGTMKIISAEIPVPKEDEVLIKVEYVGICGSDVHGFESGPFIPPKDPNQEIGLGHECAGTVVAVGSRVRKFKPGDRVNIEPGVPCGHCRYCLEGKYNICPDVDFMATQPNYRGALTHYLCHPESFTYKLPDNMDTMEGALVEPAAVGMHAAMLADVKPGKKIIILGAGCIGLMTLQACKCLGATEIAVVDVLEKRLAMAEQLGATVVINGAKEDTIARCQQFTEDMGADIVFETAGSAVTVKQAPYLVMRGGKIMIVGTVPGDSAINFLKINREVTIQTVFRYANRYPVTIEAISSGRFDVKSMVTHIYDYRDVQQAFEESVNNKRDIIKGV
type: DOMAIN
name: PKS_ER
description: Polyketide synthase, enoylreductase domain

phrase: GHECAGTVVAVGSR
type: CONSERVED_SITE
name: ADH_Zn_CS
description: Alcohol dehydrogenase, zinc-type, conserved site

phrase: IGLMTLQACKCLGATEIAVVDVLEKRLAMAEQLGATVVINGAKEDTIARCQQFTEDMGADIVFETAGSAVTVKQAPYLVMRGGKIMIVGTVPGDSAINFLKINREVTIQTVFRYANRYPVTIEAI
type: DOMAIN
name: ADH-like_C
description: Alcohol dehydrogenase-like, C-terminal
Protein sequence:
MNSTEFTEDVEEVLKSITVKVETEAEDAALDCSVNSRTSEKHSVDSVLTALQDSSKRKQLVSDGLLDSVPGVKRRRLIPEALLAGMRNRENSSPCQGNGEQAGRGRSLGNVWPGEEEPCNDATTPSYKKPLYGISHKIMEKKNPPSGDLLNVYELFEKANASNSPSSLRLLNEPQKRDCGSTGAGTDNDPNIYFLIQKMFYMLNTLTSNMSQLHSKVDLLSLEVSRIKKQVSPTEMVAKFQPPPEYQLTAAELKQIVDQSLSGGDLACRLLVQLFPELFSDVDFSRGCSACGFAAKRKLESLHLQLIRNYVEVYYPSVKDTAVWQAECLPQLNDFFSRFWAQREMEDSQPSGQVASFFEAEQVDPGHFLDNKDQEEALSLDRSSTIASDHVVDTQDLTEFLDEASSPGEFAVFLLHRLFPELFDHRKLGEQYSCYGDGGKQELDPQRLQIIRNYTEIYFPDMQEEEAWLQQCAQRINDELEGLGLDAGSEGDPPRDDCYDSSSLPDDISVVKVEDSFEGERPGRRSKKIWLVPIDFDKLEIPQPDFEVPGADCLLSKEQLRSIYESSLSIGNFASRLLVHLFPELFTHENLRKQYNCSGSLGKKQLDPSRIKLIRHYVQLLYPRAKNDRVWTLEFVGKLDERCRRRDTEQRRSYQQQRKVHVPGPECRDLTSYAINPERFREEFEGPPLPPERSSKDFCKIPLDELVVPSPDFPVPSPYLLSDKEVREIVQQSLSVGNFAARLLVRLFPELFTAENLRLQYNHSGACNKKQLDPTRLRLIRHYVEAVYPVEKMEEVWHYECIPSIDERCRRPNRKKCDILKKAKKVEK

Annotated regions:
phrase: VPGADCLLSKEQLRSIYESSLSIGNFASRLLVHLFPELFTHENLRKQYNCSGSLGKKQLDPSRIKLIRHYVQLLYPRAKNDRVWTLEFVGKLDERCRRRDTE
type: DOMAIN
name: BEN_domain
description: BEN domain

phrase: PPPEYQLTAAELKQIVDQSLSGGDLACRLLVQLFPELFSDVDFSRGCSACGFAAKRKLESLHLQLIRNYVEVYYPSVKDTAVWQAECLPQLNDFFSRFWAQ
type: DOMAIN
name: BEN_domain
description: BEN domain

phrase: ASDHVVDTQDLTEFLDEASSPGEFAVFLLHRLFPELFDHRKLGEQYSCYGDGGKQELDPQRLQIIRNYTEIYFPDMQEEEAWLQQCAQRINDELEGLGLD
type: DOMAIN
name: BEN_domain
description: BEN domain

phrase: GEFAVFLLHRLFPELFDHRKLGEQYSCYGDGGKQELDPQRLQIIRNYTEIYFPDMQEEEAWLQQCAQRINDELEGLGLD
type: DOMAIN
name: BEN_domain
description: BEN domain

phrase: GDLACRLLVQLFPELFSDVDFSRGCSACGFAAKRKLESLHLQLIRNYVEVYYPSVKDTAVWQAECLPQLNDFFSRFWAQ
type: DOMAIN
name: BEN_domain
description: BEN domain

phrase: GNFASRLLVHLFPELFTHENLRKQYNCSGSLGKKQLDPSRIKLIRHYVQLLYPRAKNDRVWTLEFVGKLDERCRRRDTE
type: DOMAIN
name: BEN_domain
description: BEN domain

phrase: GNFAARLLVRLFPELFTAENLRLQYNHSGACNKKQLDPTRLRLIRHYVEAVYPVEKMEEVWHYECIPSIDERCRRPNRK
type: DOMAIN
name: BEN_domain
description: BEN domain

phrase: NFAARLLVRLFPELFTAENLRLQYNHSGACNKKQLDPTRLRLIRHYVEAVYPVEKMEEVWHYECIPSIDERCRR
type: DOMAIN
name: BEN_domain
description: BEN domain

phrase: DLACRLLVQLFPELFSDVDFSRGCSACGFAAKRKLESLHLQLIRNYVEVYYPSVKDTAVWQAECLPQLNDFFSRF
type: DOMAIN
name: BEN_domain
description: BEN domain

phrase: NFASRLLVHLFPELFTHENLRKQYNCSGSLGKKQLDPSRIKLIRHYVQLLYPRAKNDRVWTLEFVGKLDERCRR
type: DOMAIN
name: BEN_domain
description: BEN domain

phrase: EFAVFLLHRLFPELFDHRKLGEQYSCYGDGGKQELDPQRLQIIRNYTEIYFPDMQEEEAWLQQCAQRINDE
type: DOMAIN
name: BEN_domain
description: BEN domain

phrase: VPSPYLLSDKEVREIVQQSLSVGNFAARLLVRLFPELFTAENLRLQYNHSGACNKKQLDPTRLRLIRHYVEAVYPVEKMEEVWHYECIPSIDERCRRPNRK
type: DOMAIN
name: BEN_domain
description: BEN domain
Protein sequence:
MATRPGPLTEWPWHRLGNFKYVVMAPVVAHGARRVMRNGWGDLDIAFSLILPSLLLRMIHNQIWISLSRYQTARSKHRIVDRGIEFDQVDRERGWDDQILFNGLVFYAGYLAMPSVRRMPVWRTDGAVVTALVHTGPVEFLYYWFHRALHHHFLYSRYHSHHHASIVTEPITSVIHPFAEHVVYFILFAIPILSTIYLGNVSAMGIVGYIAYIDFMNNMGHCNFELVPEWIFQIFPPLKYLIYTPSFHSLHHTQFRTNYSLFMPFYDYIYNTMDKSSDELYESSLKGTEETPDLVHLTHMTNLQSAYHLRIGIASIASKPYSDSAWYMWTLWPLAWLSMVLAWIYGSSAFVVERIKLNKMKMQTWALPRYNFQYGLTWEREPINDLIEKAILDADMKGVKVISLGLLNQAKQLNGNGELFRQKYPKLGVRIIDGSGLATAVVLKSIPSDAKKVFLRTGTSKIARAIAIALCDRGVQVIMNEKEVYHMLKSQIPENRASYLKLSSDNVPQLWIVHNIDDNEQKMAPKGTIFIPISQFPLKKLRKDCTYMSTPAMRIPEEMKNIHSCENWLPRRVMSAWHIAGILHALEGWNMHECGDEMMDIEKSWSAAIRHGFLPLTKA

Annotated regions:
phrase: VEFLYYWFHRALHHHFLYSRYHSHHHASIVTEPITSVIHPFAEHVVYFILFAIPILSTIYLGNVSAMGIVGYIAYIDFMNNMGHCNFELVPEWIFQIFPPLKYLIYTPSFHSLHHTQFRTNYSLFMPFYDYIYN
type: DOMAIN
name: Fatty_acid_hydroxylase
description: Fatty acid hydroxylase

phrase: VFLRTGTSKIARAIAIALCDRGVQVIMNEKEVYHMLKSQIPENRASYLKLSSDNVPQLWIVHNIDDNEQKMAPKGTIFIPISQFPLKKLRKDCTYMSTPAMRIPEEMKNIHSCENWLPRRVMSAWHIAGILHALEGWNMHECGDEMMDIEKSWSAAIRHGFL
type: DOMAIN
name: CER1-like_C
description: Very-long-chain aldehyde decarbonylase CER1-like, C-terminal
Protein sequence:
MPSASCDVLLDDIEDIISQEDSKPQDRQFSRKHVFPKVRRRNTQKYLQEEPRPPSDSTIPGIQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENASDADLWLLNSCTVKNPAEDHFRNSIKKAQEENKKVVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQKKDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGNLASYPIDELVERAKQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGAMLRLGMTNPPYILEHLEEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYKFPSLFINQFYPRPGTPAAKAEQVPAHVKKQRTKDLSRVFHSYNPYDHKIGERQQVLVTEESFDSKFYVAHNRFYEQVLVPKNPAFMGKMVEVDIYESGKHFLKGQPVSETRVYTPSISKPLAKGEVSGLTKEFRNRLGNHPNGTSDTCPATQHGSAYSRMVLQMSQYDCALKVATGLALLALLLHFWPDSLLTM

Annotated regions:
phrase: IISINTGCLNACTYCKTKHARGNLASYPIDELVERAKQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGAMLRLGMTNPPYILEHLEEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYKFPSLFINQFYPRPGTPAAKAEQVPAHVKKQRTKDLSRVFHSYNPYDHKIGERQQVLV
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: ISINTGCLNACTYCKTKHAR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: PLIEIISINTGCLNACTYCKTKHARGNLASYPIDELVERAKQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGAMLRLGMTNPPYILEHLEEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYKFPSLFINQFYPRPGTPAAKAEQVPAHVKKQRTKDLS
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: DHKIGERQQVLVTEESFDSKFYVAHNRFYEQVLVPKNPAFMGKMVEVDIYESGKHFLKGQPV
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: QKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENASDADLWLLNSCTVKNPAEDHFRNSIKKAQEENKKVVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETI
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: RKNPLIEIISINTGCLNACTYCKTKHARGNLASYPIDELVERAKQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGAMLRLGMTNPPYILEHLEEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKLVEEYKFPSLFINQFYPRPGTPAAKAEQVPAHVKKQRTKDLSRVFHSYNPY
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: KIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENASDADLWLLNSCTVKNPAEDHFRNSIKKAQEENKKVVLAGCVPQAQP
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: KIGERQQVLVTEESFDSKFYVAHNRFYEQVLVPKNPAFMGKMVEVDIYESGKHFLKGQP
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: ISINTGCLNACTYCKTKHARGNLASYPIDELVERAKQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGAMLRLGMTNPPYILEHLEEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFKRVVDFLKEKVPGITIATDIICGFPGETDQDFQETVKL
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MSEAEAPLITEEAAERGLASSGSRRLSDGAGGQGSRKYRRRSDALAYGDRYQKAAALVDLAEDGVGIPEDVLNDTRFGRAMSFYFVYLRLDWLWSLNLFALILLNFLEKPLWCRKDALQAYDQRDLYFLGQLPYFSKTESLIYEGLTLVILVMDIFCPLSYEGLNIFWRSTTNKLKIVLLFILACDILVFAFSSQPFRLAPYIRVVFLIMTIRELRMCAITLAGLIGTYLNVLALSLLFLLFASWLAYVTFEDTPQGKTIFSSYGVTLYQMFVLFTTSNNPDVWVHAYKIPRWYSLFFIVYVLLGVYFLTNLILAVIYDSFKEQFAKQLVQVDSIRKNILQKAFDLIDTNNRGYLDREQCISLLNELNKYRSLPKTSREDFELIFAELDRSGDFKVTSEEFADLCNTIAIKFQKEPPPSYLEKFPFYHSPLCGRLKSFVRSRMFEYIIVFVLLINLVAVIIETTLDIENSSSQETWQEVEFFLGWIYVAEMALKIFSLGFGAYWMEGQNKFDFVLTWTIFIGETLTFAFPSKLPFLSNGEWIRYLLLGRVLRLTRILLQVQRFRAFVATFFTLMSSLMPYLGIVFCVLCMYCSIGLQIFGGIVYAGNPTLEETDLFNNDYLLFNFNDYPSGMVTLFNLLVMGNWQVWMESYWQLTGTSWSLIYFVSFYLISILLLLNLIVAFVLEAFFAEMELEKGEEVDIQNPTSGGIKKRRSMRVRSKGTMVDILLHHMLSNELDGSQNS

Annotated regions:
phrase: TSREDFELIFAELDRSGDFKVTSEEFADLCNTIAI
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: LQKAFDLIDTNNRGYLDREQCISLLNELNKYRSLPKTSREDFELIFAELDRSGDFKVTSEEFAD
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: LTLVILVMDIFCPLSYEGLNIFWRSTTNKLKIVLLFILACDILVFAFSSQPFRLAPYIRVVFLIMTIRELRMCAITLAGLIGTYLNVLALSLLFLLFASWLAYVTFEDTPQGKTIFSSYGVTLYQMFVLFTTSNNPDVWVHAYKIPRWYSLFFIVYVLLGVYFLTNLILAVIYDSFKEQF
type: DOMAIN
name: Ion_trans_dom
description: Ion transport domain

phrase: RMFEYIIVFVLLINLVAVIIETTLDIENSSSQETWQEVEFFLGWIYVAEMALKIFSLGFGAYWMEGQNKFDFVLTWTIFIGETLTFAFPSKLPFLSNGEWIRYLLLGRVLRLTRILLQVQRFRAFVATFFTLMSSLMPYLGIVFCVLCMYCSIGLQIFGGIVYAGNPTLEETDLFNNDYLLFNFNDYPSGMVTLFNLLVMGNWQVWMESYWQLTGTSWSLIYFVSFYLISILLLLNLIVAFVLEAFF
type: DOMAIN
name: Ion_trans_dom
description: Ion transport domain

phrase: DFELIFAELDRSGDFKVTSEEFADLCNT
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: ILQKAFDLIDTNNRGYLDREQCISLLNE
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: LQKAFDLIDTNNRGYLDREQCISLLNELNKYRSLPKTSREDFELIFAELDRSGDFKVTSEEFAD
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: IRKNILQKAFDLIDTNNRGYLDREQCISLLNELNK
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain
Protein sequence:
MQIWVDADACPNVIKDVLFRAADRTQTQVTLVANQTIKVPPSRFIRTLRVSSGFDVADNEIVRRVEAGDLVITADIPLAAEVIEKGGAALNPRGERYTPDTIRERLNMRDFMDTMRASGIQTGGPSALSQRDRQQFANELDKWLHQAKKP

Annotated regions:
Protein sequence:
MELEKLKKLLKEEKEPEYRFRQIYQAVFKNFCFNFEEMTALPEELKKKLKKEIEIFVFKLKDIKKGKEAEKALFQLKDGFYIETVLMRHKYGKKTVCVSSQVGCPLGCRFCATGKMGFKRNLNWQEITDQVLFFAEKEKDKKLNVVFMGMGEPLLNYENVLKAIRVLNDKDGFNLGARAISISTAGIIPGIKRLQKENLEINLAVSLNSPEDKQRTYLMPVNKTYPLKELILAAKNYVRTTKRKLFFEYIMLKDINDDRHSAQKLVKLLKNEPLFHVNLIRYHETETGFKSSEEKAILEFQNMLKRNGLGVTLRHSFGKEIKAACGQLATSQE

Annotated regions:
phrase: SSQVGCPLGCRFCATGKMGFKRNLNWQEITDQVLFFAEKEKDKKLNVVFMGMGEPLLNYENVLKAIRVLNDKDGFNLGARAISISTAGIIPGIKRLQKENLEINLAVSLNSPEDKQRTYLMPVNKTYPLKELILAAKNYVRTTKRKLFFEYIMLKDINDD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: KYGKKTVCVSSQVGCPLGCRFCATGKMGFKRNLNWQEITDQVLFFAEKEKDKKLNVVFMGMGEPLLNYENVLKAIRVLNDKDGFNLGARAISISTAGIIPGIKRLQKENLEINLAVSLNSPEDKQRTYLMPVNKTYPLKELILAAKNYVRTTKRKLFFEYIMLKDINDDRHSAQKLVKLLKNEPLFHVNLIRYHETETGFKSSEEKAILEFQNMLKRNGLGVTLRHSFGK
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: MELEKLKKLLKEEKEPEYRFRQIYQAVFKNFCFNFEEMTALPEELKKKLKKEIE
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MKFIIKLHSEITIKSKSVRLRFIKLLESNLRVAVRRVEEDTKVDRFWDKLEVRVPDSADRAAVIEKICSTPGVAHALEVSQFAFNDVHDIYQVAQQAWGHTLAGKTFCVRVKRSGKHSFSSIEVERYVGGGLNQNNATGGVRLKNPDVTLNIEVEDDKLYLVTQRHPGLGGFPIKTQEDLLSLISGGFDSGVASYQAIRRGSRTHYCFFNLGGNAHEIGTKQMAYHLWDRFGASHRVKFVTVPFEGVVGEILEKIDDGLMGVVLKRMMMRAAAKVAERMGIQALVTGEAVGQVSSQTLTNLTVIERSVDTLILRPLIFTDKQEIVDTARAIGTFEIAETMPEFCGVISKSPNVRADIKKVEATEEGFDFAVLDQALESAKVMDIRDIATESSQQVVEVETFALVPDNGVILDIRAPDEEEDKPLDVAGVEVKTIPFYKLATQFGDLPKEQLYYLYCAKGVMSKLQALYLQEQGFDNVRVYRPH

Annotated regions:
phrase: VPDNGVILDIRAPDEEEDKPLDVAGVEVKTIPFYKLATQFGDLPKEQLYYLYCAKGVMSKLQALYLQEQGFDNVRV
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain

phrase: TQEDLLSLISGGFDSGVASYQAIRRGSRTHYCFFNLGGNAHEIGTKQMAYHLWDRFGASHRVKFVTVPFEGVVGEILEKIDDGLMGVVLKRMMMRAAAKVAERMGIQALVTGEAVGQVSSQTLTNLTVIERSVDTLILRPLIFTDKQEIVDTARAIGTFEIAETMPEFCGVISKSPNVRADIKKVEATEEGFD
type: DOMAIN
name: ThiI_AANH
description: Thil, AANH domain

phrase: KFIIKLHSEITIKSKSVRLRFIKLLESNLRVAVRRVEEDTKVDRFWDKLEVRVPDSADRAAVIEKICSTPGVAHALEVSQFAFNDVHDIYQVAQQAWGHTLAGKTFCVRVKRSGKHSFSSIEVERYVGGGLNQNNATGGVRLKNPDVTLNIEVEDDKLYLVTQRHPGL
type: DOMAIN
name: THUMP_ThiI
description: ThiI, THUMP domain

phrase: IIKLHSEITIKSKSVRLRFIKLLESNLRVAVRRVEEDTKVDRFWDKLEVRVPDSADRAAVIEKICSTPGVAHALEVSQFAFNDVHDIYQVAQQAWGHTLAGKTFCVRVKRSGKHSFSSIEVERYVGGGLNQNNATGGVRLKNPDVTLNIEVEDDKLYLVTQRHPGLGGFPIKTQEDLLSLISGGFDSGVASYQAIRRGSRTHYCFFNLGGNAHEIGTKQMAYHLWDRFGASHRVKFVTVPFEGVVGEILEKIDDGLMGVVLKRMMMRAAAKVAERMGIQALVTGEAVGQVSSQTLTNLTVIERSVDTLILRPLIFTDKQEIVDTARAIGTFEIAETMPEFCGVISKSPNVRADIKKVEATEEGFD
type: DOMAIN
name: ThiI_N
description: ThiI, N-terminal

phrase: IKTQEDLLSLISGGFDSGVASYQAIRRGSRTHYCFFNLGGNAHEIGTKQMAYHLWDRFGASHRVKFVTVPFEGVVGEILEKIDDGLMGVVLKRMMMRAAAKVAERMGIQALVTGEAVGQVSSQTLTNLTVIERSVDTLILRPLIFTDKQEIVDTARAIGTFEIAETMPEFCGVISKSPNVR
type: DOMAIN
name: ThiI_AANH
description: Thil, AANH domain

phrase: NDVHDIYQVAQQAWGHTLAGKTFCVRVKRSGKHSFSSIEVERYVGGGLNQNNATGGVRLKNPDVTLNIEVEDDKLYL
type: DOMAIN
name: THUMP_dom
description: THUMP domain

phrase: MDIRDIATESSQQVVEVETFALVPDNGVILDIRAPDEEEDKPLDVAGVEVKTIPFYKLATQFGDLPKEQLYYLYCAKGVMSKLQALYLQEQGFDNVRVYR
type: DOMAIN
name: THII_Thiazole_biosynth_dom
description: ThiI, thiazole biosynthesis domain

phrase: FIIKLHSEITIKSKSVRLRFIKLLESNLRVAVRRVEEDTKVDRFWDKLEVRVPDSADRAAVIEKICSTPGV
type: DOMAIN
name: ThiI_fer
description: ThiI, ferredoxin-like domain

phrase: HALEVSQFAFNDVHDIYQVAQQAWGHTLAGKTFCVRVKRSGKHSFSSIEVERYVGGGLNQNNATGGVRLKNPDVTLNIEVEDDKLYLVTQ
type: DOMAIN
name: THUMP_dom
description: THUMP domain

phrase: AAVIEKICSTPGVAHALEVSQFAFNDVHDIYQVAQQAWGHTLAGKTFCVRVKRSGKHSFSSIEVERYVGGGLNQNNATGGVRLKNPDVTLNIEVEDDKLYLVTQ
type: DOMAIN
name: THUMP_dom
description: THUMP domain
Protein sequence:
MSAPLYVINVCDHETSAERVFGMLIERHNSFEDYPIDNDAFVNSLIVNGFRYTHVDDAVVCEYCGVVIKNWRENDVVEFVHATLSPYCVYANKIAQNEQFAEDISTDAVVVSPGKPRCVYNRLAHPSARRATFDHWPAALNALTHDIAEAGMFHTMLGDETACFFCDCRVRDWLPGDDPWQRHALANPQCYFVVCVKGDGFCNSERRAETAPGEPAPAFAGSEALECKVCLERQRDAVLLPCRHFCVCMQCYFALDGKCPTCRQDVADFIKIFVT

Annotated regions:
phrase: AHPSARRATFDHWPAALNALTHDIAEAGMFHTMLGDETACFFCDCRVRDWLPGDDPWQRHALANPQCYFVV
type: REPEAT
name: BIR_rpt
description: BIR repeat

phrase: GMLIERHNSFEDYPIDNDAFVNSLIVNGFRYTHVDDAVVCEYCGVVIKNWRENDVVEFVHATLSPYCVYAN
type: REPEAT
name: BIR_rpt
description: BIR repeat

phrase: ERHNSFEDYPIDNDAFVNSLIVNGFRYTHVDDAVVCEYCGVVIKNWRENDVVEFVHATLSPYCVYAN
type: REPEAT
name: BIR_rpt
description: BIR repeat

phrase: RHNSFEDYPIDNDAFVNSLIVNGFRYTHVDDAVVCEYCGVVIKNWRENDVVEFVHATLSPYCVYA
type: REPEAT
name: BIR_rpt
description: BIR repeat

phrase: RHNSFEDYPIDNDAFVNSLIVNGFRYTHVDDAVVCEYCGVVIKNWRENDVVEFVHATLSPYCVY
type: REPEAT
name: BIR_rpt
description: BIR repeat

phrase: RRATFDHWPAALNALTHDIAEAGMFHTMLGDETACFFCDCRVRDWLPGDDPWQRHALANPQCYF
type: REPEAT
name: BIR_rpt
description: BIR repeat

phrase: SARRATFDHWPAALNALTHDIAEAGMFHTMLGDETACFFCDCRVRDWLPGDDPWQRHALANPQCYFVV
type: REPEAT
name: BIR_rpt
description: BIR repeat

phrase: RRATFDHWPAALNALTHDIAEAGMFHTMLGDETACFFCDCRVRDWLPGDDPWQRHALANPQCYFV
type: REPEAT
name: BIR_rpt
description: BIR repeat

phrase: PSARRATFDHWPAALNALTHDIAEAGMFHTMLGDETACFFCDCRVRDWLPGDDPWQRHALANPQCYF
type: REPEAT
name: BIR_rpt
description: BIR repeat

phrase: CKVCLERQRDAVLLPCRHFCVCMQCYFALDGKCPTC
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: CKVCLERQRDAVLLPCRHFCVCMQCYFALDGKCPT
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type
Protein sequence:
MTPGKTSLVSLLLLLILEAIVKAGIASPQNPGCPNAEDKNFPRTVMVNLNIRNRNTNSKRASDYYNRSSSPWNLHRNEDPERYPSVIWEAKCRHLGCVDADGNVDYHMNSVPIQQEILVLRREPRHCTNSFRLEKMLVSVGCTCVTPIVRHVA

Annotated regions:
Protein sequence:
MIKDPFERLGLDREVLTVSQLNGRARVLLEDVFRSVWVEGEISNLARPASGHMYFTLKDSGAQVRCALFRQNATRVRQALRDGLAVRVRGKVSLFEGRGDYQLILDTVEPAGDGALRLAFEALKEKLGAEGLFSAERKKPLPAHPQRIGIITSPTGAVIRDIISVFGRRAPQVELNLIPTAVQGREAIAQIVRAIRLADSLGFDALILARGGGSLEDLWCFNEEAVARAVAACVTPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDNSGLRQRLDGLQRRLLLRMQNRLTHDRLRLESLTRRLRHPGERLRQRAQRLDDLDMRLRRAFMLNLNQRRERLARLDARLAAQHPGRNLKLLNQRLDSLAERLPRAMREVLKDRRQRFQAQLQTLQVVSPLATLARGYSILLDEQGQAIRSAEQTRNGQRLTARLNEGELLVRVEDNHLTPVTLSLLD

Annotated regions:
phrase: LFSAERKKPLPAHPQRIGIITSPTGAVIRDIISVFGRRAPQVELNLIPTAVQGREAIAQIVRAIRLADSLGFDALILARGGGSLEDLWCFNEEAVARAVAACVTPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPDNSGLRQRLDGLQRRLLLRMQNRLTHDRLRLESLTRRLRHPGERLRQRAQRLDDLDMRLRRAFMLNLNQRRERLARLDARLAAQHPGRNLKLLNQRLDSLAERLPRAMREVLKDRRQRFQAQLQTLQVVSPLATLARGYSILLDEQGQAIRSAEQTRNGQRLTARLNEGEL
type: DOMAIN
name: Exonuc_VII_lsu_C
description: Exonuclease VII, large subunit, C-terminal

phrase: LTVSQLNGRARVLLEDVFRSVWVEGEISNLARPASGHMYFTLKDSGAQVRCALFRQNATRVRQALRDGLAVRVRGKVSLFEGRGDYQLILDT
type: DOMAIN
name: OB-fold_nuc-bd_dom
description: OB-fold nucleic acid binding domain

phrase: SVWVEGEISNLARPASGHMYFTLKDSGAQVRCALFRQNATRVRQALRDGLAVRVRGKVSLFEGRGDYQLILDTVEPA
type: DOMAIN
name: OB-fold_nuc-bd_dom
description: OB-fold nucleic acid binding domain
Protein sequence:
MTVALGKSSKEEKNLFDIADDWLRRDRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGLASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVAFHGGFGLIGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLFEDGDGANTFRAFNPTQAEETYSMVTANRFWSQIFGVAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDFVSQEIRAAEDPEFETFYTKNILLNEGIRAWMAAQDQPHENLIFPEEVLPRGNAL

Annotated regions:
phrase: NWTLNPFHMMGVAGVLGAALLCAIHG
type: CONSERVED_SITE
name: Photo_RC_L/M_CS
description: Photosynthetic reaction centre, L/M, conserved site
Protein sequence:
MSELIPLSEVGVVNPTSATTNRPRRPEWLKARAPGGVNYHDVLRLMREKNLHTVCEEARCPNIGECWNHRTATFLLLGDICTRGCRYCAIGKGKPKPIDEEEPERVAESVAHLRLKFAVLTSVNRDDVPDGGAHIFARTIELIRQKVPDCKVEVLIPDFDGNWDALAMVLDAEPDVLNHNIETVPRLFRRFRPRAKFEQSIELLARARAAHPHLVTKSGMMVGAGETNEEVYEVIDRLREVDVNVLTIGQYLAPDASYWPVHRYVTPAEFADFRAYALARGFRHVESGPLVRSSYNAHLHVGAAQH

Annotated regions:
phrase: WNHRTATFLLLGDICTRGCRYCAIGKGKPKPIDEEEPERVAESVAHLRLKFAVLTSVNRDDVPDGGAHIFARTIELIRQKVPDCKVEVLIPDFDGNWDALAMVLDAEPDVLNHNIETVPRLFRRFRPRAKFEQSIELLARARAAHPHLVTKSGMMVGAGETNEEVYEVIDRLREVDVNVLTIGQYLAPDASYWPVHRYVTPAEFADFRAYALARGF
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LGDICTRGCRYCAIGKGKPKPIDEEEPERVAESVAHLRLKFAVLTSVNRDDVPDGGAHIFARTIELIRQKVPDCKVEVLIPDFDGNWDALAMVLDAEPDVLNHNIETVPRLFRRFRPRAKFEQSIELLARARAAHPHLVTKSGMMVGAGETNEEVYEVIDR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TTNRPRRPEWLKARAPGGVNYHDVLRLMREKNLHTVCEEAR
type: DOMAIN
name: LIAS_N
description: Lipoyl synthase, N-terminal

phrase: TSATTNRPRRPEWLKARAPGGVNYHDVLRLMREKNLHTVCEEARCPNIGECWNHRTATFLLLGDICTRGCRYCAIGKGKPKPIDEEEPERVAESVAHLRLKFAVLTSVNRDDVPDGGAHIFARTIELIRQKVPDCKVEVLIPDFDGNWDALAMVLDAEPDVLNHNIETVPRLFRRFRPRAKFEQSIELLARARAAHPHLVTKSGMMVGAGETNEEVYEVIDRLREVDVNVLTIGQYLAPDASYWPVHRYVTPAEFADFRAYALARGFRHVESGPLVRSSYNAHLH
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TATFLLLGDICTRGCRYCAIGKGKPKPIDEEEPERVAESVAHLRLKFAVLTSVNRDDVPDGGAHIFARTIELIRQKVPDCKVEVLIPDFDGNWDALAMVLDAEPDVLNHNIETVPRLFRRFRPRAKFEQSIELLARARAAHPHLVTKSGMMVGAGETNEEVYEVIDRLREVDVNVLTIGQYLAPDASYWPVHRYVTPAEFADFRAYA
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain