nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MAKVTDIVLWDKPGERVLLLGNHAIARGALEANIAVFAAYPGTPSSELTDTMAAVAKKAGVYMEYSTNEKVAFETALAAAWSGLRAMTAMKHVGLNVAADSFLSSVGMGVEGGFVIMVADDPSMWSSQNEQDTRVYAKFANVPVLEPSSPHEAKEMTKYAFELSEKFKHFVILRTTTRSSHARGDVVLGELPEEIKTGKRKFGKFKKDPTRFVDVPAHARKFHPLILEKIEKIREELNNCPFNWIEGKEDAKVGIIAPGLSYAYVKEALAWLGVEDVKILKLGTPFPVPYGLLGKFFDGLEKVLIVEELEPVVEEQVKTWAYDKGLRIPIHGKDLVPRVYEMTTRRAVEAIAKFLGLETPINFAEIDEKYEKVSQIVPPRPPSLCPACPHRNSFFAIRKAAGPKAIYPSDIGCYTLGVLPPLRTVDTTVAMGASIGIGHGLSIAMNGSLAEEEHKEGKEKQIIVATIGDSTFYHTGLPALANAIYNRSNVLIVVLDNLVTAMTGDQPNPGTGQTPHGMGKRIPIEDVAKAMGADFVAVVDPYDIKATYETIKKALEVEGVSVVVSRQVCALYKIGQMRRRGMKWPIYHVVEDKCTGCKICINAYGCPAIYWDPETKKAKVDPTMCWGCGGCAQVCPFDAFEPMKEGE

Annotated regions:
phrase: GALEANIAVFAAYPGTPSSELTDTMAAVAKKAGVYMEYSTNEKVAFETALAAAWSGLRAMTAMKHVGLNVAADSFLSSVGMGVEGGFVIMVADDPSMWSSQNEQDTRVYAKFANVPVLEPSSPHEAKEMTKYAFELSEKFKHFVILRTTTRSSHARGDVVLGELPEEIKTGKRKFGK
type: DOMAIN
name: Pyrv_Fd/Flavodoxin_OxRdtase_N
description: Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain

phrase: GNHAIARGALEANIAVFAAYPGTPSSELTDTMAAVAKKAGVYMEYSTNEKVAFETALAAAWSGLRAMTAMKHVGLNVAADSFLSSVGMGVEGGFVIMVADDPSMWSSQNEQDTRVYAKFANVPVLEPSSPHEAKEMTKYAFELSEKFKHFVILRTT
type: DOMAIN
name: Pyrv_Fd/Flavodoxin_OxRdtase_N
description: Pyruvate flavodoxin/ferredoxin oxidoreductase, pyrimidine binding domain

phrase: KCTGCKICINAYGCPAIYWDPETKKAKVDPTMCWGCGGCAQVCPFD
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: KKAKVDPTMCWGCGGCAQVCPFDAFEPMK
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: CWGCGGCAQVC
type: CONSERVED_SITE
name: 4Fe4S_Fe_S_CS
description: 4Fe-4S ferredoxin, iron-sulphur binding, conserved site

phrase: DIGCYTLGVLPPLRTVDTTVAMGASIGIGHGLSIAMNGSLAEEEHKEGKEKQIIVATIGDSTFYHTGLPALANAIYNRSNVLIVVLDNLVTAMTGDQPNPGTGQTPHGMGKRIPIEDVAKAMGADFVAVVDPYDIKATYETIKKALEVEGVSV
type: DOMAIN
name: TPP_enzyme_TPP-bd
description: Thiamine pyrophosphate enzyme, TPP-binding

phrase: PIYHVVEDKCTGCKICINAYGCPAIYWDP
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain
Protein sequence:
MKQRKFFGTDGIRGRVGAGKMTPELALKLGWAAGRVLSRNGTQKVIIGKDTRISGYLFESALEAGLSAAGLNVLLLGPMPTPAVAYLTRTFRAEAGVVISASHNPYYDNGIKFFSTDGSKLDDAIELEIEAELEKPLVCVESHLLGKARRIEDAAGRYIEYCKGNFPADQTLEGLKIVVDCAHGATYHIAPNVFRELGADVIAIGDKPDGLNINDKVGATSMAKICETVLAEKADLGIALDGDGDRIMMVNRHGEVVDGDQILYILAVDAQKRGILKGGVVGTLMSNLGLDLALQALDIPFVRSKVGDRYVMEMLRENEWRIGGENSGHILNLDHGTTGDGIVAGILVLAAMRRQNASLEQLTEPMKMLPQVLVNVRFEGDSNPLDTDAVKSAQADVELQLGARGRVLLRKSGTEPLIRVMVEGDDHPQVLAHANRIADAVKAAC

Annotated regions:
phrase: RYIEYCKGNFPADQTLEGLKIVVDCAHGATYHIAPNVFRELGADVIAIGDKPDGLNINDKVGATSMAKICETVLAEKADLGIALDGDGDRIMMVNRH
type: DOMAIN
name: A-D-PHexomutase_a/b/a-II
description: Alpha-D-phosphohexomutase, alpha/beta/alpha domain II

phrase: GVVISASHN
type: CONSERVED_SITE
name: A-D-PHexomutase_CS
description: Alpha-D-phosphohexomutase, conserved site

phrase: DGDQILYILAVDAQKRGILKGGVVGTLMSNLGLDLALQALDIPFVRSKVGDRYVMEMLRENEWRIGGENSGHILNLDHGTTGDGIVAGILVLAAMRRQNASLEQLTEP
type: DOMAIN
name: A-D-PHexomutase_a/b/a-III
description: Alpha-D-phosphohexomutase, alpha/beta/alpha domain III

phrase: LVNVRFEGDSNPLDTDAVKSAQADVELQLGARGRVLLRKSGTEPLIRVMVEGDDHPQVLAHANRIA
type: DOMAIN
name: A-D-PHexomutase_C
description: Alpha-D-phosphohexomutase, C-terminal

phrase: KFFGTDGIRGRVGAGKMTPELALKLGWAAGRVLSRNGTQKVIIGKDTRISGYLFESALEAGLSAAGLNVLLLGPMPTPAVAYLTRTFRAEAGVVISASHNPYYDNGIKFFSTDGSKLDDAIELEIEAELE
type: DOMAIN
name: A-D-PHexomutase_a/b/a-I
description: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I
Protein sequence:
MSEKFVELRKEFLTKLYKSTPSEQTSRSEKETWLEEKSKYLGEMTRELNEVQDQIAPYDRRVCMEQLVDLTRRLQQIRHDILPRQPFRFQRALHVKSSQKPVKNITVNAEAPEVYFENDTLYLANLKNQNIGDNVIPYPNNKAVKVSAKSLRSCNISISNCSSVNLHNATKCNFTFPTIQGSIHLSDINDSTICVSCHQFRLHHSTNLRVHLRCKTSPVIEESKEISFSYKDEHPILDFTWARSDPSPHFRITSDLFDA

Annotated regions:
phrase: PEVYFENDTLYLANLKNQNIGDNVIPYPNNKAVKVSAKSLRSCNISISNCSSVNLHNATKCNFTFPTIQGSIHLSDINDSTICVSCHQFRLHHSTNLRVHLRCKTSPVIEESKEISFSYKDEHPILDFT
type: DOMAIN
name: C-CAP_CF_C-like
description: C-CAP/cofactor C-like domain

phrase: INDSTICVSCHQFRLHHSTNLRVHLRCKTSPVIE
type: DOMAIN
name: CARP_motif
description: CARP motif

phrase: LRSCNISISNCSSVNLHNATKCNFTFPTIQGSIHLS
type: DOMAIN
name: CARP_motif
description: CARP motif

phrase: KVSAKSLRSCNISISNCSSVNLHNATKCNFTFPTIQGSIHLSDINDSTICVSCHQFRLHHSTNLRVHLRCKTSPVIEESKEISFSYKDEHPILDFTWARSDPSPHFRITSD
type: DOMAIN
name: Tubulin-bd_cofactor_C_dom
description: Tubulin binding cofactor C-like domain
Protein sequence:
MLTIISSAKTLNFELIAFKGELTSPAFPKITNQLLAIVKNYSEVQLSKTMDISEKLAHLNKERFQNFEKQDSKAAIFAYAGDVFNNIQSKNLSEDAVNFLQSHLLIISGLYGALKPLDAIKPYRLEMAAKLNEINDLSKFWQDEITNYINHTLEHHKHKYLLNLASQEYSSVLNQDKLKYPIINIHFKENRNGKLATIGINAKKARGNMVNFIANNLIDSPDLLKEFSYLGYKYSSKDSLNNDLVFVK

Annotated regions:
Protein sequence:
MIGRLRGILAYKQPPWLVIDVGGVGYELEAPMSTFYDLPDVGRDVILFTHYAQKEDSVSLYGFLREGERRLFRDVQKVTGIGAKIALAVLSGVTVDEFARLITSGDITALTRIPGIGKKTAERMVVELRDRAADFSSGAPITGQLGPDAISEATVALQQLGYKPAEAARMARDAGAEGGEVATVIRKALQAALR

Annotated regions:
phrase: RDVQKVTGIGAKIALAVLS
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: TALTRIPGIGKKTAERMVV
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: DAISEATVALQQLGYKPAEAARMARDAGAEGGEVATVIRKAL
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal

phrase: MIGRLRGILAYKQPPWLVIDVGGVGYELEAPMSTFYDLPDVGRDVILFTHYAQKEDSVSLY
type: DOMAIN
name: DNA_helicase_Holl-junc_RuvA_I
description: DNA helicase, Holliday junction RuvA type, domain I, bacterial

phrase: DAISEATVALQQLGYKPAEAARMARDAGAEGGEVATVIRKALQ
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal
Protein sequence:
MVRRQSAPRLEFEAAAIYEYPEHLRPFLSEAPALPGVYIFHSESDTLPLYIGKSVNIRSRVLSHLRTPDEAAMLRQARRISWICTAGEMGALLLEARLIKEQQPLFNKRLRRNRQLCSLQLSEQKIEVVSARSVDFSHEPNLFGLFANRRAALQSLQNLADEQKLCYGLLGLEPVSRGRACFRFALKRCAGACCGQETPQAHFLRLQASLERLRVVCWPWKGAIALKESRPQMTQFHIINNWLWLGAVPSLDEAATLVRTPAGFDQDGYKILCKPLMSGQYEIIELHTDCRQS

Annotated regions:
phrase: ALPGVYIFHSESDTLPLYIGKSVNIRSRVLSHLRTPDEAAMLRQARRISWICTAGEMGALLLEARLIKEQQPLFN
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: LPGVYIFHSESDTLPLYIGKSVNIRSRVLSHLRTPDEAAMLRQARRISWICTAGEMGALLLEARLIKEQQPLFNKRLR
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: APALPGVYIFHSESDTLPLYIGKSVNIRSRVLSHLRTPDEAAMLRQARRISWICTAGEMGALLLEARLIKEQQPLFN
type: DOMAIN
name: GIY-YIG_UvrC_Cho
description: UvrC/Cho-like, GIY-YIG domain
Protein sequence:
MVSTISRQDQNNNDDLNQPSKEGRFGKYGGQYVPETLMPALFELEEAASDAWKDKQFVNELNHLLKTYVGRETPLYEAKRLTEHYQTKTSTSRIWLKREDLNHTGAHKINNALGQALLAIRMGKQRIIAETGAGQHGVATATVCARFGLQCIIYMGAEDIKRQSLNVFRMKLLGAEVKVVTSGTATLKDATSEAIRDWVSNVETTHYILGSVAGPHPFPMIVRDFHAVIGEEAKKQCLESFGSLPDILLACVGGGSNAMGLFHPFVKEKSVRLIGVEAAGSGVNTEKHAATITKGSVGILHGSMSLLLQDKDGQVQEAHSISAGLDYPGVGPEHSYLKDIGRAEYGSVTDAEALDALKLVSELEGIIPALETAHAFAWLEKLCPTLDKDTEIVINCSGRGDKDVNTVASSLNID

Annotated regions:
phrase: LNHTGAHKINNALG
type: CONSERVED_SITE
name: Trp_synth_b_CS
description: Tryptophan synthase, beta chain, conserved site

phrase: VGRETPLYEAKRLTEHYQTKTSTSRIWLKREDLNHTGAHKINNALGQALLAIRMGKQRIIAETGAGQHGVATATVCARFGLQCIIYMGAEDIKRQSLNVFRMKLLGAEVKVVTSGTATLKDATSEAIRDWVSNVETTHYILGSVAGPHPFPMIVRDFHAVIGEEAKKQCLESFGSLPDILLACVGGGSNAMGLFHPFVKEKSVRLIGVEAAGSGVNTEKHAATITKGSVGILHGSMSLLLQDKDGQVQEAHSISAGLDYPGVGPEHSYLKDIGRAEYGSVTDAEALDALKLVSELEGIIPALETAHAFAWLEKLCPTLDKDTEIVINCS
type: DOMAIN
name: TrpB-like_PALP
description: Tryptophan synthase beta chain-like, PALP domain
Protein sequence:
MKFLDEAKVYIKSGDGGGGSVSFRREKFIEFGGPDGGDGGRGGDVWVEAVNGLNTLIDFRYQQHFKATIGTHGMGRNRTGANGSDVTLKVPVGTQIFEEDQETLICDLTVEGQRYCLAHGGNGGFGNAHFKTSTNQAPDWANPGLPGEEKTIWLHLKLIADAGLVGLPNAGKSTFLASVTRARPKIANYPFTTLHPNLGVATIDEREFILADIPGLIEGAHEGVGIGDRFLGHVERTRVLLHLISAQEEKVGKAYKTVKHELEAYGNELTDKAEIVALSQIDVLDDAELKKKTKELAKACGKTPFQISAVTGKGMTEVLRALRDIIVEANTEEKPAKVPKLRHRDMVVTDEGEDKGGDEGDDQP

Annotated regions:
phrase: ADAGLVGLPNAGKSTFLASVTRARPKIANYPFTTLHPNLGVATIDEREFILADIPGLIEGAHEGVGIGDRFLGHVERTRVLLHLISAQEEKVGKAYKTVKHELEAYGNELTDKAEIVALSQIDVLDDAELKKKTKELAKACGKTPFQISAVTGKGMTEVLRALRDII
type: DOMAIN
name: G_OBG
description: OBG-type guanine nucleotide-binding (G) domain

phrase: AGLVGLPNAGKSTFLASVTRARPKIANYPFTTLHPNLGVATIDEREFILADIPGLIEGAHEGVGIGDRFLGHVERTRVLLHLISAQEEKVGKAYKTVKHELEAYGNELTDKAEIVA
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: ADAGLVGLPNAGKSTFLASVTRARPKIANYPFTTLHPNLGVATIDEREFILADIPGLIEGAHEGVGIGDRFLGHVERTRVLLHLISAQEEKVGKAYKTVKHELEAYGNELTDKAEIVALSQIDVLDDAELKKKTKELAKACGKTPFQISAVTGKGMTEVLRALRDI
type: DOMAIN
name: G_OBG
description: OBG-type guanine nucleotide-binding (G) domain

phrase: MKFLDEAKVYIKSGDGGGGSVSFRREKFIEFGGPDGGDGGRGGDVWVEAVNGLNTLIDFRYQQHFKATIGTHGMGRNRTGANGSDVTLKVPVGTQIFEEDQETLICDLTVEGQRYCLAHGGNGGFGNAHFKTSTNQAPDWANPGLPGEEKTIWLHLKL
type: DOMAIN
name: GTP1_OBG_dom
description: GTP1/OBG domain

phrase: DEAKVYIKSGDGGGGSVSFRREKFIEFGGPDGGDGGRGGDVWVEAVNGLNTLIDFRYQQHFKATIGTHGMGRNRTGANGSDVTLKVPVGTQIFEEDQETLICDLTVEGQRYCLAHGGNGGFGNAHFKTSTNQAPDWANPGLPGEEKTIWLHLK
type: DOMAIN
name: GTP1_OBG_dom
description: GTP1/OBG domain

phrase: GLVGLPNAGKSTFLASVTRARPKIANYPFTTLHPNLGVATIDEREFILADIPGLIEGAHEGVGIGDRFLGHVERTRVLLHLISAQEEKVGKAYKTVKHELEAYGNELTDKAEIVALSQIDVLDDAELKKKTKELAKACGKTPFQISAVTGKGMTEV
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: DIPGLIEGAHEGV
type: CONSERVED_SITE
name: GTP1-OBG_CS
description: GTP1/OBG, conserved site

phrase: AGLVGLPNAGKSTFLASVTR
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: RPKIANYPFTTLHPNLGV
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: LADIPGLIEGAHEGV
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: GDRFLGHVERTRVLLHLI
type: DOMAIN
name: GTP-bd
description: GTP binding domain
Protein sequence:
MAKNKFNQSWLHDHINDPYVKLAQREGYRARAAYKLKEIDEQDKLIKPGQVIVDLGAAPGSWSQYVRNKLAASPRAKDGRIDGAIVAIDILPMEPVADVTFIQGDFREESVFQQLETIVLDATGGGKVDLVLSDMAPNLSGVASADAARMEHIAELAVEFAQAHLKPEGALLIKCFHGSGYSQIVEMFKRHFRVVAPRKPKASRDKSSETFLLGRQLKHPG

Annotated regions:
phrase: YRARAAYKLKEIDEQDKLIKPGQVIVDLGAAPGSWSQYVRNKLAASPRAKDGRIDGAIVAIDILPMEPVADVTFIQGDFREESVFQQLETIVLDATGGGKVDLVLSDMAPNLSGVASADAARMEHIAELAVEFAQAHLKPEGALLIKCFHGSGYSQIVEMFKRHFRVVAPRKPKASRDKSSETFLLGR
type: DOMAIN
name: RNA_MeTrfase_FtsJ_dom
description: Ribosomal RNA methyltransferase, FtsJ domain
Protein sequence:
MQKVFKDCYALDQKCYEQYGLTEDILMEHAATGMANYIRKHFTHGCSVLIVSGVGNNGADGIVLARQLHGDYDVRLHIPFAVKSQMAKLQLDRAMRVGVKEVDSIEDADVIVDALLGAGLNKPLNENTEHIVHQLNAFNGHKVACDIPTGAGSIGLMPVSFVADVTVTMGARTEALYMDENKDVVGDILCVGLGVSASLYETEGFTWLLEQSDLNLPMRLQQNSHKGSYGHAAVFCGEKEGAGIISGMAAATFGAGLTTLVVHEKIIPPAYLMHSTVVPDSASSLAIGMGLGGHFESEFLEKYVLKSHLPIVLDADAFLSPELLTVLEQKDREIVITPHPKEFVIMWKNLTEEELTVADVQSKRFEIVRMFNAKYPHVTLLLKGANTLIIQEEQCYINALGSAKLSKGGSGDVLSGLIVSLLAQGYSAIDAALQASLALVTAANAYDGSSYAMLPTDVIAEVAKLEVS

Annotated regions:
phrase: GGSGDVLSGL
type: CONSERVED_SITE
name: Carbohydrate_kinase_pred_CS
description: Carbohydrate kinase, predicted, conserved site

phrase: NSHKGSYGHAAVFCGEKEGAGIISGMAAATFGAGLTTLVVHEKIIPPAYLMHSTVVPDSASSLAIGMGLGGHFESEFLEKYVLKSHLPIVLDADAFLSPELLTVLEQKDREIVITPHPKEFVIMWKNLTEEELTVADVQSKRFEIVRMFNAKYPHVTLLLKGANTLIIQEEQCYINALGSAKLSKGGSGDVLSGLIVSLLAQGYSAIDAALQASLALVTAANAYDGSSYAMLPTDVIA
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: YALDQKCYEQYGLTEDILMEHAATGMANYIRKHFTHGCSVLIVSGVGNNGADGIVLARQLHGDYDVRLHIPFAVKSQMAKLQLDRAMRVGVKEVDSIEDADVIVDALLGAGLNKPLNENTEHIVHQLNAFNGHKVACDIPTGAGSIGLMPVSFVADVTVTMGARTEALYMDENKDVVGDILCVGLG
type: DOMAIN
name: YjeF_N_dom
description: YjeF N-terminal domain

phrase: VFCGEKEGAGIISGMAAATFGAGLTTLVVHEKIIPPAYLMHSTVVPDSASSLAIGMGLGGHFESEFLEKYVLKSHLPIVLDADAFLSPELLTVLEQKDREIVITPHPKEFVIMWKNLTEEELTVADVQSKRFEIVRMFNAKYPHVTLLLKGANTLIIQEEQCYINALGSAKLSKGGSGDVLSGLIVSLLAQGYSAIDAALQASLALVTAANAYDGSSYAMLPTDVIA
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: DILMEHAATGMANYIRKHFTHGCSVLIVSGVGNNGADGIVLARQLHGDYDVRLHIPFAVKSQMAKLQLDRAMRVGVKEVDSIEDADVIVDALLGAGLNKPLNENTEHIVHQLNAFNGHKVACDIPTGAGSIGLMPVSFVADVTVTMGA
type: DOMAIN
name: YjeF_N_dom
description: YjeF N-terminal domain

phrase: WLLEQSDLNLPMRLQQNSHKGSYGHAAVFCGEKEGAGIISGMAAATFGAGLTTLVVHEKIIPPAYLMHSTVVPDSASSLAIGMGLGGHFESEFLEKYVLKSHLPIVLDADAFLSPELLTVLEQKDREIVITPHPKEFVIMWKNLTEEELTVADVQSKRFEIVRMFNAKYPHVTLLLKGANTLIIQEEQCYINALGSAKLSKGGSGDVLSGLIVSLLAQGYSAIDAALQASLALVTAANAYDGSSYAMLPTDVIAE
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: LEQSDLNLPMRLQQNSHKGSYGHAAVFCGEKEGAGIISGMAAATFGAGLTTLVVHEKIIPPAYLMHSTVVPDSASSLAIGMGLGGHFESEFLEKYVLKSHLPIVLDADAFLSPELLTVLEQKDREIVITPHPKEFVIMWKNLTEEELTVADVQSKRFEIVRMFNAKYPHVTLLLKGANTLIIQEEQCYINALGSAKLSKGGSGDVLSGLIVSLLAQGYSAIDAALQASLALVTAANAYDGSSYAMLPTDVIAEVAKLEV
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: CYALDQKCYEQYGLTEDILMEHAATGMANYIRKHFTHGCSVLIVSGVGNNGADGIVLARQLHGDYDVRLHIPFAVKSQMAKLQLDRAMRVGVKEVDSIEDADVIVDALLGAGLNKPLNENTEHIVHQLNAFNGHKVACDIPTGAGSIGLMPVSFVADVTVTMGARTEALYMDENKDVVGDILCVGLGVSASLY
type: DOMAIN
name: YjeF_N_dom
description: YjeF N-terminal domain

phrase: LEQSDLNLPMRLQQNSHKGSYGHAAVFCGEKEGAGIISGMAAATFGAGLTTLVVHEKIIPPAYLMHSTVVPDSASSLAIGMGLGGHFESEFLEKYVLKSHLPIVLDADAFLSPELLTVLEQKDREIVITPHPKEFVIMWKNLTEEELTVADVQSKRFEIVRMFNAKYPHVTLLLKGANTLIIQEEQCYINALGSAKLSKGGSGDVLSGLIVSLLAQGYSAIDAALQASLALVTAANAYDGSSYAMLPTDVIAEVAKLEV
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase
Protein sequence:
MTLLTRIKTETILLESDIKELIDILISPSIGTDIKYELLSSYSEREIQQQELTYIVRSLINTMYPHQPCYEGAMCVCGTGGDKSNSFNISTTVAFVVASAGVKVIKHGNKSITSNSGSTDLLNQMNIQTTTVDDTPNQLNEKDLVFIGATESYPIMKYMQPVRKMIGKPTILNLVGPLINPYHLTYQMVGVFDPTKLKLVAKTIKDLGRKRAIVLHGANGMDEATLSGDNLIYELTEDGEIKNYTLNATDYGLKHAPNSDFKGGSPEENLAISLNILNGKDQSSRRDVVLLNAGLSLYVAEKVDTIAEGIELATTLIDNGEALKKYHQMRGE

Annotated regions:
phrase: VCGTGGDKSNSFNISTTVAFVVASAGVKVIKHGNKSITSNSGSTDLLNQMNIQTTTVDDTPNQLNEKDLVFIGATESYPIMKYMQPVRKMIGKPTILNLVGPLINPYHLTYQMVGVFDPTKLKLVAKTIKDLGRKRAIVLHGANGMDEATLSGDNLIYELTEDGEIKNYTLNATDYGLKHAPNSDFKGGSPEENLAISLNILNGKDQSSRRDVVLLNAGLSLYVAEKVDTIAEGIELATTLIDNGEA
type: DOMAIN
name: Glycosyl_Trfase_fam3
description: Glycosyl transferase, family 3
Protein sequence:
MTILAWCIAWVLDFIIGDPQHWPHPVRWIGRLITFVQHIVRRYCHSDKALRIGGGVMWIVVVGATWGMAWGVLALAQRIHPWLGWSVEVWMIFTVLAGRSLARAAQDVERPLRENDLAESRIKLSWIVGRDTSQLQPEQINRAVVETVAENTVDGIIAPLFFLFLGGAPLAMAYKAVNTLDSMVGYKHEKYRAIGMVSARMDDVANYLPARLSWLLLGIAAGLCRLSGWRALRIGWRDRYNHSSPNCAWSEACVAGALGIQLGGPNNYFGERVDKPWIGDAQRDISVDDISRTIRLMWGASTLALALFIAARCWLSGVA

Annotated regions:
Protein sequence:
MSETGTATEKPLFGRPWIFIRGVPAMKFLPPEGPPEIAFAGRSNVGKSSLINALVGHKGLARTSNTPGRTQELNYFVPEGYSGEPGDLPPMALVDMPGYGYAQAPKDHVDAWTKLVFDYLRGRATLKRVYVLIDSRHGIKKNDEEVLSLLDKAAVSYQVVLTKTDKIKDVGVPRLIGETLEKIRKRPAAYPEVLATSSEKSFGLDDLRAEIVRTVLL

Annotated regions:
phrase: EIAFAGRSNVGKSSLINALVGHKGLARTSNTPGRTQELNYFVPEGYSGEPGDLPPMALVDMPGYGYAQAPKDHVDAWTKLVFDYLRGRATLKRVYVLIDSRHGIKKNDEEVLSLLDKAAVSYQVVLTKTDKIKDVGVPRLIGETLEKIRKRPAAYPEVLATSSEKSFGLDDLRAE
type: DOMAIN
name: G_ENGB_dom
description: EngB-type guanine nucleotide-binding (G) domain

phrase: EIAFAGRSNVGKSSLINALVGHKGLARTSNTPGRTQELNYFVPEGYSGEPGDLPPMALVDMPGYGYAQAPKDHVDAWTKLVFDYLRGRATLKRVYVLIDSRHGIKKNDEEVLSLLDKAAVSYQVVLT
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: GPPEIAFAGRSNVGKSSLINALVGHKGLARTSNTPGRTQELNYFVPEGYSGEPGDLPPMALVDMPGYGYAQAPKDHVDAWTKLVFDYLRGRATLKRVYVLIDSRHGIKKNDEEVLSLLDKAAVSYQVVLTKTDKIKDVGVPRLIGETLEKIRKRPAAYPEVLATSSEKSFGLDDLRAEIVRTVL
type: DOMAIN
name: G_ENGB_dom
description: EngB-type guanine nucleotide-binding (G) domain
Protein sequence:
MALVVKDDVKISEFINLSAAEKFLPAVMTSVKTVRISKVDKVIAMENDSLSDVDLLKGVKLVKDGYVCLAGLVVSGEWNLPDNCRGGVSVCLVDKRMQRDDEATLGSYRTSAAKKRFAFKLIPNYSITTADAERKVWQVLVNIRGVAMEKGFCPLSLEFVSVCIVHKSNIKLGLREKITSVSEGGPVELTEAVVDEFIESVPMADRLRKFRNQSKKGSNKYVGKRNDNKGLNKEGKLFDKVRIGQNSESSDAESSSF

Annotated regions:
Protein sequence:
MSAPGGPLARLEARLTREWQRRGALAWALTPFACVFGLCAALRRTAYAQGWKQPVDVGVPVVVVGNVTVGGTGKTPTVIALVDALRAAGFTPGVVSRGYGANVKAPTAVTPASRAAAAGDEPLLIARRTGAPVWVCPDRVAAAQALRAAHPDVDVIVSDDGLQHYRLARTVELVVFDHRLGGNGFLLPAGPLREPLSRHRDATLVNDPYSGALPPWPDTYALALTPGAAWHLDQPALRRPLSQFAHERVLAAAGIGAPERFFATLRAAGLAPATRALPDHYAFADNPFVDDAVDAILITEKDAVKLGASWRDARLWVVPVEAALDPRLIALVVEKLRGRSPA

Annotated regions:
Protein sequence:
MPIVIEQSARGERAFDIYSRLLKERVIFLVGQVEDYMANLVIAQLLFLESENPDKDIHLYINSPGGLVTAGLAIYDTMQFIKPDVSTLCVGQAASMGALLLAGGAAGKRYCLPHSRIMIHQPLGGFQGQASDIDIHAREILAVRDRLNKILAHHTGQPIEKIQIDTDRDNFMGGDDAVSYGLIDKVLTHRTVTAA

Annotated regions:
phrase: TLCVGQAASMG
type: ACTIVE_SITE
name: ClpP_Ser_AS
description: ClpP, Ser active site

phrase: RYCLPHSRIMIHQ
type: ACTIVE_SITE
name: ClpP_His_AS
description: ClpP, histidine active site
Protein sequence:
MNLKNRHFLKLLDFTPEEITAYLDLAAELKAAKKAGREIQRMKGKNIALIFEKTSTRTRCAFEVAARDQGAGVTYLEPSASQIGHKESIKDTARVLGRMYDAIEYRGFGQEVVEELAKYAGVPVFNGLTNEFHPTQMLADALTMREHSGKPLNQTAFAYVGDARYNMGNSLLILGAKLGMDVRIGAPQSLWPSEGIIAAAHAAAKETGAKITLTENAHEAVKNVDFIHTDVWVSMGEPKEVWQERIDLLKDYRVTPELMAASGNPQVKFMHCLPAFHNRETKVGEWIYETFGLNGVEVTEEIFESPASIVFDQAENRMHTIKAVMVAALGD

Annotated regions:
phrase: TAFAYVGDARYNMGNSLLILGAKLGMDVRIGAPQSLWPSEGIIAAAHAAAKETGAKITLTENAHEAVKNVDFIHTDVWVSMGEPKEVWQERIDLLKDYRVTPELMAASGNPQVKFMHCLPAFHNRETKVGEWIYETFGLNGVEVTEEIFESPASIVFDQAENRMHTIKAVMV
type: DOMAIN
name: Asp_carbamoyltransf_Asp/Orn-bd
description: Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain

phrase: RHFLKLLDFTPEEITAYLDLAAELKAAKKAGREIQRMKGKNIALIFEKTSTRTRCAFEVAARDQGAGVTYLEPSASQIGHKESIKDTARVLGRMYDAIEYRGFGQEVVEELAKYAGVPVFNGLTNEFHPTQMLADALTMR
type: DOMAIN
name: Asp/Orn_carbamoyltranf_P-bd
description: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding
Protein sequence:
MAISFDKAFGIHQYALSVRSKRAEVLSSNIANADTPGFKARDINFSQALEEAQHQQGFGLATTSEKHFALQSDAPGLTQYRNPLQPDTGDGNTVDVQQERSEFLRNSLEYQTSLEFMNSKISGLLKALKGEQ

Annotated regions:
phrase: HQYALSVRSKRAEVLSSNIANADTPGF
type: DOMAIN
name: Flag_bb_rod_N
description: Flagellar basal body rod protein, N-terminal

phrase: ALSVRSKRAEVLSSNIANAD
type: CONSERVED_SITE
name: Flagellar_basal_body_rod_CS
description: Flagellar basal body rod protein, conserved site
Protein sequence:
MRRALRLLPLPLSIAICLPAMAADKPFNWGLCPTVDPLPGFDGAPAADPKAAEMRQQLPTDIEGDQLSGTSTTPQYQGNVALKRGDQFLGADNLRMDTETGNYIAEGNVRYQDTSFRMVADRAEGNQDTDTHKVTNIRYQLVERRGNGDAESVDLQGQVGQMHRSTYTTCDPSQPIWRVRAPEIDVDNGEGFGTARNAVLQIGNVPVLYFPWFKFPIDDRRQTGLLFPQFGLSRRNGFDYLQPIYLNLAPNYDATLLPRYMSKRGFMFGTEFRYLYEGGRGEVTGNYLPNDKLRDKDRGSVFYSGYHNVNSNWQARSSISWVSDTRYVEDFTSRLNGMGSTSSLQSTVGIYGTGETWTAGLMAERWQLTDYTLDERSLPYNRQPRAYFNWEKPFGIFEAGVYAEAVRFTHDDSYFVQPPSPSVPGEANNRDNNDKYVRTNIRNQEYGSGSRLDLKPYVSMPLSGAAWFFTPTLAWRYTAYQLDSTLAKTGPLTGDRSPSRSLPIASVDAGLYFDRETSLLGTNYLNTLEPRMYYLYVPYRDQDDLPVFDTRPFTFSYGQLFRDTRYTGADRQNDANQLTLAVTSRWLRQDDGREKLSLSAGQILYFSDSRVTINNSTNAVAGSEQTIDQGKSAWVVDANYMINDRWSMGATYQWNPNSRKEDLASLRTRYLLDNDGIINLAYRYRRNLIDNSDQLKQADFSFLYPINPSWSAVGRYYYSLQDRKPLEIIGGVQWDSCCLAVRGLVRRFVRNRDGQMDNSIQIEFVLKGLSSFGQNTDRTLRRAILGYYRDDLYLVPPSNTTTNPDDYDPNLIP

Annotated regions:
phrase: EGDQLSGTSTTPQYQGNVALKRGDQFLGADNLRMDTETGNYIAEGNVRYQDTSFRMVADRAEGNQDTDTHKVTNIRYQLVERRGNGDAESVDLQGQVGQMHRSTYTTCDPSQPIWRVRAPEIDVDNG
type: DOMAIN
name: OstA-like_N
description: Organic solvent tolerance-like, N-terminal

phrase: KDRGSVFYSGYHNVNSNWQARSSISWVSDTRYVEDFTSRLNGMGSTSSLQSTVGIYGTGETWTAGLMAERWQLTDYTLDERSLPYNRQPRAYFNWEKPFGIFEAGVYAEAVRFTHDDSYFVQPPSPSVPGEANNRDNNDKYVRTNIRNQEYGSGSRLDLKPYVSMPLSGAAWFFTPTLAWRYTAYQLDSTLAKTGPLTGDRSPSRSLPIASVDAGLYFDRETSLLGTNYLNTLEPRMYYLYVPYRDQDDLPVFDTRPFTFSYGQLFRDTRYTGADRQNDANQLTLAVTSRWLRQDDGREKLSLSAGQILYFSDSRVTINNSTNAVAGSEQTIDQGKSAWVVDANYMINDRWSMGATYQWNPNSRKEDLASLRTRYLLDNDGIINLAYRYRRNLIDNSDQLKQADFSFLYPINPS
type: DOMAIN
name: LptD_C
description: LptD, C-terminal
Protein sequence:
MQVLPPSSTGGPSRLFIMRPVATTLLMVAILLAGIIGYRALPVSALPEVDYPTIQVVTLYPGASPDVMTSAVTAPLERQFGQMSGLKQMSSQSSGGASVITLQFQLTLPLNVAEQEVQAAINAATNLLPSDLPNPPVYSKVNPADPPIMTLAVTSTAMPMTQVEDMVETRVAQKISQISGVGLVTLSGGQRPAVRVKLNAQAIAALGLTSETVRTAITGANVNSAKGSLDGPSRAVTLSANDQMQSAEEYRQLIIAYQNGAPIRLGDVATVEQGAENSWLGAWANKEQAIVMNVQRQPGANIISTADSIRQMLPQLTESLPKSVKVTVLSDRTTNIRASVDDTQFELMMAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTFAVMVFLDFSINNLTLMALTIATGFVVDDAIVVIENISRYIEKGEKPLAAALKGAGEIGFTIISLTFSLIAVLIPLLFMGDIVGRLFREFAITLAVAILISAVVSLTLTPMMCARMLSQESLRKQNRFSRASEKMFDRIIAAYGRGLAKVLNHPWLTLSVALSTLLLSVLLWVFIPKGFFPVQDNGIIQGTLQAPQSSSFANMAQRQRQVADVILQDPAVQSLTSFVGVDGTNPSLNSARLQINLKPLDERDDRVQKVIARLQTAVDKVPGVDLFLQPTQDLTIDTQVSRTQYQFTLQATSLDALSTWVPQLMEKLQQLPQLSDVSSDWQDKGLVAYVNVDRDSASRLGISMADVDNALYNAFGQRLISTIYTQANQYRVVLEHNTENTPGLAALDTIRLTSSDGGVVPLSSIAKIEQRFAPLSINHLDQFPVTTISFNVPDNYSLGHAVQAIMDTEKTLNLPVDITTQFGSTLAFQSALGSTVWLIVAAVVAMYIVLGILYESFIHPITILSTLPTAGVGALLALMIAGSELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGMSPRDAIYQACLLRFRPILMTTLAALLGALPLMLSTGVGAELRRPLGIGMVGGLIVSQVLTLFTTPVIYLLFDRLALWTKSRFARHEEEA

Annotated regions:
Protein sequence:
MISFIKGVLIEKDPTALLIDVNGIGYEVFVPMTTFYTLGDIDSQVSLYTHFVVREDAQQLYGFKSKVDKKVFQELIKVNGIGARTAIAILSGMDSKTLLHCIENKDYALLATVPGIGKKTAERLVVEIYDKLLKMANEIYAQTSGTTTTSQDSQAQQAPTSVVLANSIFNESVDALLALGYKQKDAEKMARSAMGDATTAAEVIRKALQGSIKSKG

Annotated regions:
phrase: SIFNESVDALLALGYKQKDAEKMARSAMGDATTAAEVIRKAL
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal

phrase: QELIKVNGIGARTAIAILS
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: ALLATVPGIGKKTAERLVV
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: FNESVDALLALGYKQKDAEKMARSAMGDATTAAEVIRKAL
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal

phrase: MISFIKGVLIEKDPTALLIDVNGIGYEVFVPMTTFYTLGDIDSQVSLYTHFVVREDAQQLY
type: DOMAIN
name: DNA_helicase_Holl-junc_RuvA_I
description: DNA helicase, Holliday junction RuvA type, domain I, bacterial
Protein sequence:
MLKNDLFLRALKRQPCSRTPIWVMRQAGRYLPEYRAVREKTDFLTLCKTPELAAEVTIQPVDLMGVDAAIIFSDILVVNEAMGMDVEIIESKGIRLSPAIRSQVDIDRLIIPDINEKLGYVMDAIRLTKKELDNRVPLIGFSGAAWTLFTYAVEGGGSKNYAFAKKMMYREPKMAHMLLSKISSVITEYVLMQIEAGADAIQIFDSWASALSEDDYREFALPYIKENVQAIKTKYPDTPVIVFSKDCNTILSEIADTGCDAMGLGWNMDIAKARKELNDRVCIQGNMDPTVLYGTPDKIRSEAAKILKQFGQHTATSGHVFNLGHGILPDVDPANLKLLVEFVKEESVKYH

Annotated regions:
phrase: IGFSGAAWTLFTYAVE
type: DOMAIN
name: Uroporphyrinogen_deCOase
description: Uroporphyrinogen decarboxylase (URO-D)

phrase: KNDLFLRALKRQPCSRTPIWVMRQAGRYLPEYRAVREKTDFLTLCKTPELAAEVTIQPVDLMGVDAAIIFSDILVVNEAMGMDVEIIESKGIRLSPAIRSQVDIDRLIIPDINEKLGYVMDAIRLTKKELDNRVPLIGFSGAAWTLFTYAVEGGGSKNYAFAKKMMYREPKMAHMLLSKISSVITEYVLMQIEAGADAIQIFDSWASALSEDDYREFALPYIKENVQAIKTKYPDTPVIVFSKDCNTILSEIADTGCDAMGLGWNMDIAKARKELNDRVCIQGNMDPTVLYGTPDKIRSEAAKILKQFGQHTATSGHVFNLGHGILPDVDPANLKLLVEFVK
type: DOMAIN
name: Uroporphyrinogen_deCOase
description: Uroporphyrinogen decarboxylase (URO-D)

phrase: PIWVMRQAG
type: DOMAIN
name: Uroporphyrinogen_deCOase
description: Uroporphyrinogen decarboxylase (URO-D)
Protein sequence:
MYGQNVRNVSYYPPYGYNGYKQSGERMWRMSHSLPSGMDTDFTSSYPGPSAMNPRGRGGYNDFSGGGSAMGSMCNMAPAQSTNSLNSGGDGGGGDTQAVNGTNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKTVNGITVRNKRLKVSYARPGGESIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPRGVAFVRFNKREEAQEAISALNNVIPEGASQPLTVRLAEEHGKMKAHHFMNQLGMGPPAAPIPAAGPGYNNMVHRGRQNKMRNHKVHPYHNPQKFI

Annotated regions:
phrase: LYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPRGVAFVRFNKREEAQEAISALNN
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: LIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKTVNGITVRNKRL
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: NLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPRGVAFVRFNKREEAQEAISALNNVIPEGASQPLTV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: NLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKTVNGITVRNKRLKV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: TNLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKTVNGITVRNKRLKVSYAR
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: TNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPRGVAFVRFNKREEAQEAISALNNVIPEGASQPLTVRLAE
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain