nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSTLPKPQRKTKRNTNRRPQDVKFPGGGQIVGGVYLLPRRGPRLGVRATRKTSERSQPRGRRQPIPKARQSQGRTWGQPGYPWPLYGNEGCGWAGWLLSPRGSRPSWGPNDPRRRSRNLGKVIDTLTCGFADLMGYLPVVGGPLGGVAAALAHGVRAVEDGINYATGNLPGCSFSIFLLALLSCLTVPASAHQVRNASGLYILTNDCANSSIIFEGDGIILHMPGCVPCEKKNETEFLCWAGVTPTLSVRDPGAPTAGFRRHVDLIAGAAVVCSSLYIGDICGGVFLVGQLFTFQPRRYWTTQECNCSIFLGHVSGHRMAWDMMQNWSPTVTWVISSLLRIPQLLFDMVSGGHWGVLAAVAFYGMSSNWLKVLVVMVLFAGVDGETTLIGSRQGSAINAITSIFNQGPKQRILLVNSSGSWHINSTALNCNDSLKTGFIAALFYTNAHLDLTGCPERMSACKRITDFDQGWGPLTYANISGPQEDKPYCWHYPPRPCGVVAAKSVCGPVYCFTPSPVVVGTTDRLGYATYSWGEGDKDVFILNSTRPPSGGWFGCTWMNTTGYTKTCGAPPCRTRPPGSGNNTLICPTDCFRKHPEATYGRCGSGPWLTPRCLVDYPYRLWHYPCTVNYTLHKIRLYIGGTEHRLTAACSWTRGERCDLEDRDRADLSPLLFSTTELAILPCSFTPMPALSTGLIHLHQNIVDVQYLYGVGSIIVSWAVKWEYVVLAFLMLADSRICLCLWLMFLVGRAEAALENLVALNTISAAGSH

Annotated regions:
phrase: GSRQGSAINAITSIFNQGPKQRILLVNSSGSWHINSTALNCNDSLKTGFIAALFYTNAHLDLTGCPERMSACKRITDFDQGWGPLTYANISGPQEDKPYCWHYPPRPCGVVAAKSVCGPVYCFTPSPVVVGTTDRLGYATYSWGEGDKDVFILNSTRPPSGGWFGCTWMNTTGYTKTCGAPPCRTRPPGSGNNTLICPTDCFRKHPEATYGRCGSGPWLTPRCLVDYPYRLWHYPCTVNYTLHKIRLYIGGTEHRLTAACSWTRGERCDLEDRDRADLSPLLFSTTELAILPCSFTPMPALSTGLIHLHQNIVDVQYLYGVGSIIVSWAVKWEYVVLAFLMLA
type: DOMAIN
name: HCV_NS1
description: Hepatitis C virus, Non-structural protein E2/NS1

phrase: QVRNASGLYILTNDCANSSIIFEGDGIILHMPGCVPCEKKNETEFLCWAGVTPTLSVRDPGAPTAGFRRHVDLIAGAAVVCSSLYIGDICGGVFLVGQLFTFQPRRYWTTQECNCSIFLGHVSGHRMAWDMMQNWSPTVTWVISSLLRIPQLLFDMVSGGHWGVLAAVAFYGMSSNWLKVLVVMVLFAGV
type: DOMAIN
name: HCV_Env
description: Hepatitis C virus, Envelope glycoprotein E1

phrase: STLPKPQRKTKRNTNRRPQDVKFPGGGQIVGGVYLLPRRGPRLGVRATRKTSERSQPRGRRQPIPKARQSQGRTWGQPGYPWPLYGNEGCGWAGWLLSPRGSRPSWGPNDPRR
type: DOMAIN
name: HCV_core_N
description: Hepatitis C virus, Core protein, N-terminal

phrase: SRNLGKVIDTLTCGFADLMGYLPVVGGPLGGVAAALAHGVRAVEDGINYATGNLPGCSFSIFLLALLSCLTVPA
type: DOMAIN
name: HCV_Core_C
description: Hepatitis C virus, Core protein, C-terminal
Protein sequence:
MYPHRRADMNPISEFIRGITKDNPTFGLVLGLCPTLAVTTSVENGIGMAMGTLFVLVGSNMMVSAIRKGIPGTVRLPVEIIVIATFVTIVDMVMEAFTPDLYTSLGVFIPLIVVNCIVIGRAEAYALKNGVFYSIIDALGEGTGFLLVLILIGGIRELLGTGIIDPFGMTLINLSGVINPAMFMTMSPGAFLTIAVLMTIVNYRRQQKAAKGG

Annotated regions:
Protein sequence:
MDLPPLSLDQLSAVITAGPTPTDLYTSLSAYEEQACLLSATDPSEKDLLLEFYTAFFFSHLLTDQICEARALTRRIPREISRLDAMQTCSLLLRAVWQSKHTEIYKILRELPWPGRSQPLVQRYESYFQEKTLVEMSNSYETIRIAAAATYLGLDPAAVEGDIIEKFTACGWKWDSEKQLLHPKPVVTAPPKDDSLQNELSRVMALISNQGS

Annotated regions:
phrase: TSLSAYEEQACLLSATDPSEKDLLLEFYTAFFFSHLLTDQICEARALTRRIPREISRLDAMQTCSLLLRAVWQSKHTEIYKILRELPWPGRSQPLVQRYESYFQEKTLVEMSNSYETIRIAAAATYLGLDPAAVEGDIIEKFTACGWKWDSEKQLLHPKPVVTAPPK
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain

phrase: LEFYTAFFFSHLLTDQICEARALTRRIPREISRLDAMQTCSLLLRAVWQSKHTEIYKILRELPWPGRSQPLVQRYESYFQEKTLVEMSNSYETIRIAAAATYLGLDPAAVEGDIIEKFTACGWKWDSEKQLLHPKP
type: DOMAIN
name: CSN8_PSD8_EIF3K
description: CSN8/PSMD8/EIF3K
Protein sequence:
MSTHVTFDYSKALSFIGEHEITYLRDAVKVTHHAIHEKTGAGNDFLGWVDLPLQYDKEEFARIQKCAEKIKNDSDILLVVGIGGSYLGARAAIEMLNHSFYNTLSKEQRKTPQVLFVGQNISSTYMKDLMDVLEGKDFSINVISKSGTTTEPALAFRIFRKLLEEKYGKEEARKRIYATTDKARGALKTLADNEGYETFVIPDDVGGRFSVLTPVGLLPIAVSGLNIEEMMKGAAAGRDDFGTSELEENPAYQYAVVRNALYNKGKTIEMLVNYEPALQYFAEWWKQLFGESEGKDQKGIFPSSANFSTDLHSLGQYVQEGRRDLFETVLKVGKSTHELTIESEENDLDGLNYLAGETVDFVNTKAYEGTLLAHSDGGVPNLIVNIPELNEYTFGYLVYFFEKACAMSGYLLGVNPFDQPGVEAYKKNMFALLGKPGFEELKAELEERLK

Annotated regions:
phrase: KEEFARIQKCAEKIKNDSDILLVVGIGGSYLGARAAIEMLNHSFYNTLSKEQRKTPQVLFVGQNISSTYMKDLMDVLEGKDFSINVISKSGTTTEPALAFRIFRKLLEEKYGKEEARKRIYATTDKARGALKTLADNEGYETFVIPDDVGGRFSVLTPVGLLPIA
type: DOMAIN
name: SIS_PGI_1
description: Phosphoglucose isomerase, SIS domain 1

phrase: DDVGGRFSVLTPV
type: CONSERVED_SITE
name: Phosphoglucose_isomerase_CS
description: Phosphoglucose isomerase, conserved site

phrase: GYLLGVNPFDQPGVEAY
type: CONSERVED_SITE
name: Phosphoglucose_isomerase_CS
description: Phosphoglucose isomerase, conserved site

phrase: IEMLVNYEPALQYFAEWWKQLFGESEGKDQKGIFPSSANFSTDLHSLGQYVQEGRRDLFETVLKVGKSTHELTIESEENDLDGLNYLAGETVDFVNTKAYEGTLLAHSDGGVPNLIVNIPELNEYTFGYLVYFFEKACAMSGYLLGVNPFDQPGVEAYKKNMFA
type: DOMAIN
name: SIS_PGI_2
description: Phosphoglucose isomerase, SIS domain 2
Protein sequence:
MYIFFPKLNPIIFTIGPVSARWYGFMYVISFLFAMWYGKKCSIKNKKIWYEKKIETLLYSIFLGSCIGGRIGYIIFYNFSYYSQNMLSVFYIWEGGMSFHGGLIGAIIVMSYFSFKYKKKILEISDFITPLIPFGLGAGRIGNFINSELWGRVSPNFSYAMIFPNSQNQDLKEIKKYPELQLLSDQYGALPRHPTQLYEFFLEGILLFFIIYFFSKKDRPTGSISGLFLIFYGLFRIFIEFFREPDPQIGLLKNIITMGQILSLPMIIAGLIIMYKSCYKK

Annotated regions:
Protein sequence:
MSKRQLCILGSTGSIGCSTLDVVRLHPERFQVISLAAYTSVDVIFEQCIEFKPQQVVLVSSEHAALLTQKLNDANVSNITVLSGEQALIDIAECQNSDTVMASIVGASGLLPTLAAVNAGKRVLLANKEALVTSGAIFMAAVKASGAELLPIDSEHNAIFQCLPSQQQAEIGECQLLANGISKILLTGSGGPFRTRAIDTLESVTPSQACAHPNWDMGRKISVDSATMMNKGLEFIEAKWLFNVEAEDIQVVLHPQSTIHSMVQYKDGSVIAQMGNPDMRTPIAHALSFPERIESGVAPLDFFNTPSFEFQPVDFERYPNLELAIEACKQGQAACTALNAANEIAVAAFLDEKIKFTDIYKINETSVKKFVSQKVDNINEVIALDEQARSFAQTLLADFLQTEALSQKGNK

Annotated regions:
phrase: LCILGSTGSIGCSTLDVVRLHPERFQVISLAAYTSVDVIFEQCIEFKPQQVVLVSSEHAALLTQKLNDANVSNITVLSGEQALIDIAECQNSDTVMASIVGASGLLPTLAAVNAGKRVLLANKEALVTS
type: DOMAIN
name: DXP_reductoisomerase_N
description: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal

phrase: LLPIDSEHNAIFQCLPSQQQAEIGECQLLANGISKILLTGSGGPFRTRAIDTLESVTPSQACAHPNWDMGRKISVDSATMMNKGLEFIEAKWL
type: DOMAIN
name: DXP_reductoisomerase_C
description: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal

phrase: MGNPDMRTPIAHALSFPERIESGVAPLDFFNTPSFEFQPVDFERYPNLELAIEACKQGQAACTALNAANEIAVAAFLDEKIKFTDIYKINETSVKKFVSQKVDNINEVIALDEQAR
type: DOMAIN
name: DXPR_C
description: DXP reductoisomerase, C-terminal domain
Protein sequence:
MNVKRKATLKFGICIGLLCVSFTGFNSLFGSTHAEAKSIENTKMTSCITNQKFVQLEKKFDARLGVYAIDTGSNKTIAYRPNERFAYASTYKVLAAAAVLKQKPIEKLNDVIRYTKEDLVTYSPITEKHLDTGMSLKEISEAAIRYSDNTAGNILLQQLGGPKGFEKSLKQIGDHVTKADRFETDLNSAIPGDIRDTSTAKALATDLKAFTLGNTLTTDKRTILTDWMRGNATGDELIRAGAPAGWEVGDKSGAGSYGTRNDIAIVWPPDRAPIVLAILTKRFTKDAEYDNALIAEAAKVALDDLK

Annotated regions:
phrase: GVYAIDTGSNKTIAYRPNERFAYASTYKVLAAAAVLKQKPIEKLNDVIRYTKEDLVTYSPITEKHLDTGMSLKEISEAAIRYSDNTAGNILLQQLGGPKGFEKSLKQIGDHVTKADRFETDLNSAIPGDIRDTSTAKALATDLKAFTLGNTLTTDKRTILTDWMRGNATGDELIRAGAPAGWEVGDKSGAGSYGTRNDIAIVWPPDRAPIVLAIL
type: DOMAIN
name: Beta-lactam_cat
description: Beta-lactamase class A, catalytic domain

phrase: FAYASTYKVLAAAAV
type: ACTIVE_SITE
name: Beta-lactam_class-A_AS
description: Beta-lactamase, class-A active site
Protein sequence:
MPKNSKAVKRELDDDVIDSVKDLLSNEDSGDEAFKKSELIVDDQSDKDGDIEEGSDIEDERPAWNSKLQYILAQVGFSVGLGNVWRFPYMCQKNGGGAYLVPYLILLLVIGIPLFFLELCVGQRIRRGSIGVWNFISPKMGGIGFASCIVCFFVALYYNVIIGWSLFYFSQSFQHPLPWDQCPLAKNASHTFVEPECEKSSATTYYWYREALDISSSISDGGGLNWKMTLCLLAAWIIICLAMIKGIQSSGKIMYFSSLFPYVVLICFLVRGLLLNGALDGIRHMFTPKLEIMLEPKVWREAATQVFFALGLGFGGVIAFSSYNKRDNNCHFDAVLVSFINFFTSILATLVVFAVLGFKANVINQNCIIQNSAKIVHLLKAGNLSRDMIPHHINFSAITAKDYHLVYDIIKKVEEEEFAALGLAPCLTEDELNKSVQGTGLAFIAFTEAMTHFPASPFWSVMFFLMLVNLGLGSMFGTIEGIITPLVDTFKVRKELLTIGCCLLAFSVGLIFVQRSGNYFVTMFDDYSATLPLLIVVILENIAVAWIYGLDKFMEELKDMLGFTPYRYYFYMWKYISPLFLLLLLISSIIQMGFSPPGYSVWIEERATEQFQSYPVWGIIVCISLIILAILPVPIVFVVRLCNLMEDGSGSLASVSYKRGRIIKETSNLEGDDASLIHGKISSELPSPNLGTNIYRKQTESPDLRVDTAPNGRYGIGYLMADMADMPESDL

Annotated regions:
phrase: RPAWNSKLQYILAQVGFSVGLGNVWRFPYMCQKNGGGAYLVPYLILLLVIGIPLFFLELCVGQRIRRGSIGVWNFISPKMGGIGFASCIVCFFVALYYNVIIGWSLFYFSQSFQHPLPWDQCPLAKNASHTFVEPECEKSSATTYYWYREALDISSSISDGGGLNWKMTLCLLAAWIIICLAMIKGIQSSGKIMYFSSLFPYVVLICFLVRGLLLNGALDGIRHMFTPKLEIMLEPKVWREAATQVFFALGLGFGGVIAFSSYNKRDNNCHFDAVLVSFINFFTSILATLVVFAVLGFKANVINQNCIIQNSAKIVHLLKAGNLSRDMIPHHINFSAITAKDYHLVYDIIKKVEEEEFAALGLAPCLTEDELNKSVQGTGLAFIAFTEAMTHFPASPFWSVMFFLMLVNLGLGSMFGTIEGIITPLVDTFKVRKELLTIGCCLLAFSVGLIFVQRSGNYFVTMFDDYSATLPLLIVVILENIAVAWIYGLDKFMEELKDMLGFTPYRYYFYMWKYISPLFLLLLLISSIIQMGFSPPGYSVWIEERATEQFQSYPVWGIIVCISLIILAILPVPIVFVV
type: DOMAIN
name: B(0)AT2
description: B(0)AT2, solute-binding domain
Protein sequence:
MSASTTATLRHDWTLAEVRALFVQPFNDLLFQAQTLHRAHFDANRVQVSTLLSIKTGACPEDCKYCPQSGHYNTGLEKEKLLEVQKVLEEAARAKSIGSTRFCMGAAWKHPSAKDMPYVLEMVKGVKAMGLETCMTLGRLDQEQTEALATAGLDYYNHNLDTSPEFYGSIITTRTYGERLQTLAYVRDAGMKICSGGILGMGESLDDRAGLLIQLANLPEHPESVPINMLVKVAGTPLENAEDVDPFDFIRMLAVARILMPQSHVRLSAGREAMNEQMQALAFFAGANSIFYGDKLLTTANPQADKDMLLFSRLGIKPEAGEGHADEVHQAAIEQALVEQQSSAMFYDAASA

Annotated regions:
phrase: PINMLVKVAGTPLENAEDVDPFDFIRMLAVARILMPQSHVRLSAGREAMNEQMQALAFFAGANSIFYGDKLLTTANPQADKDMLLFSRLGIK
type: DOMAIN
name: BATS_dom
description: Biotin and thiamin synthesis-associated domain

phrase: STLLSIKTGACPEDCKYCPQSGHYNTGLEKEKLLEVQKVLEEAARAKSIGSTRFCMGAAWKHPSAKDMPYVLEMVKGVKAMGLETCMTLGRLDQEQTEALATAGLDYYNHNLDTSPEFYGSIITTRTYGERLQTLAYVRDAGMKICSGGILGMGESLDDRAGLLIQLANLPEHPESVPINMLVKVAGTPLENAEDVDPFDFIRMLAVARILM
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: STTATLRHDWTLAEVRALFVQPFNDLLFQAQTLHRAHFDANRVQVSTLLSIKTGACPEDCKYCPQSGHYNTGLEKEKLLEVQKVLEEAARAKSIGSTRFCMGAAWKHPSAKDMPYVLEMVKGVKAMGLETCMTLGRLDQEQTEALATAGLDYYNHNLDTSPEFYGSIITTRTYGERLQTLAYVRDAGMKICSGGILGMGESLDDRAGLLIQLANLPEHPESVPINMLVKVAGTPLENAEDVDPFDFIRMLAVARILMPQSHVRLSAGREAMNEQMQALAFFAGANSIFYGDKLLTTANPQADKDMLLFSRLGIKPEAGE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: NRVQVSTLLSIKTGACPEDCKYCPQSGHYNTGLEKEKLLEVQKVLEEAARAKSIGSTRFCMGAAWKHPSAKDMPYVLEMVKGVKAMGLETCMTLGRLDQEQTEALATAGLDYYNHNLDTSPEFYGSIITTRTYGERLQTLAYVRDAGMKICSGGILGMGESLDDRAGLLIQLANLPEHPESVPINMLVKVAGTPLENAEDVDPFDFIRMLAVARILMP
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: KTGACPEDCKYCPQSGHYNTGLEKEKLLEVQKVLEEAARAKSIGSTRFCMGAAWKHPSAKDMPYVLEMVKGVKAMGLETCMTLGRLDQEQTEALATAGLDYYNHNLDTSPEFYGSIITTRTYGERLQTLAYVRDAGMKICSGGILGMGESLDDRA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: PINMLVKVAGTPLENAEDVDPFDFIRMLAVARILMPQSHVRLSAGREAMNEQMQALAFFAGANSIFYGDKLLTTANPQADKDMLLFSRLG
type: DOMAIN
name: BATS_dom
description: Biotin and thiamin synthesis-associated domain
Protein sequence:
MSKPFKLNSAFKPSGDQPDAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMLIDQRAILRRLAELQYTRNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQVESTVPRYTIYPKTHYVTPRERILQAMEEIKDELADRRKVLLANNKLLEEQRLSQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGDEVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALGQNIAKTKAKGKGKGRSTAKAGIVELDMTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS

Annotated regions:
phrase: LHLTVGMLIDQRAILRRLAELQYTRNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQVESTVPRYTIYPKTH
type: DOMAIN
name: UvrB_inter
description: UvrB, interaction domain

phrase: SAFKPSGDQPDAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMLIDQRAILRRLAELQYTRNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQVESTVPRYTIYPKTHYVTPRERILQAMEEIKDELADRRKVLLANNKLLEEQRLSQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGDEVVDQVVRPTGLLDPIIE
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: QKIHELEGQMMQHAQNLEFEEAAQIRDQLHQLR
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: EGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMLIDQRAILRRLAELQYT
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: DLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAAR
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: QQKIHELEGQMMQHAQNLEFEEAAQIRDQLHQLRE
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: PSGDQPDAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAV
type: DOMAIN
name: Helicase/UvrB_N
description: Helicase/UvrB, N-terminal

phrase: EDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARN
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: QVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDI
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: LYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKK
type: DOMAIN
name: UvrB_YAD/RRR_dom
description: UvrB, YAD/RRR-motif-containing domain
Protein sequence:
MTDKLIIRGGKKLAGTLQVDGAKNSAVALIPAAILAESEVVLEGLPDISDVHTLYNILEELGGTVRYDNKTAVIDPTDMISMPLPSGNVKKLRASYYLMGAMLGRFKKAVIGLPGGCYLGPRPIDQHIKGFEALGAKVTNEQGAIYLRADELKGARIYLDVVSVGATINIMLAAVRAKGKTVIENAAKEPEIIDVATLLTNMGAIIKGAGTDTIRITGVEHLHGCHHTIIPDRIEAGTFMVLAAASGKGVRIENVIPTHLEGIIAKLTEMGVPMDIEEDAIFVGEVEKIKKVDIKTYAYPGFPTDLQQPLTALLTRAEGSSVITDTIYPSRFKHIAEIERMGGKFKLEGRSAVINGPVQLQGSKVTATDLRAGAALVIAALLADGETEIHGVEHIERGYSKIIEKLSAIGANITRSSAAETKL

Annotated regions:
phrase: RGGKKLAGTLQVDGAKNSAVALIPAAILAESEVVLEGLPDISDVHTLYNILEELGGTVRYDNKTAVIDPTDMISMPLPSGNVKKLRASYYLMGAMLGRFKKAVIGLPGGCYLGPRPIDQHIKGFEALGAKVTNEQGAIYLRADELKGARIYLDVVSVGATINIMLAAVRAKGKTVIENAAKEPEIIDVATLLTNMGAIIKGAGTDTIRITGVEHLHGCHHTIIPDRIEAGTFMVLAAASGKGVRIENVIPTHLEGIIAKLTEMGVPMDIEEDAIFVGEVEKIKKVDIKTYAYPGFPTDLQQPLTALLTRAEGSSVITDTIYPSRFKHIAEIERMGGKFKLEGRSAVINGPVQLQGSKVTATDLRAGAALVIAALLADGETEIHGVEHIERGYSKIIEK
type: DOMAIN
name: Enolpyruvate_Tfrase_dom
description: Enolpyruvate transferase domain
Protein sequence:
MKVLALSALLSLASAASISRRSDFCGQWDTATAGDFILYNDLWGEDNASSGSQCTGVDSASGNEIAWHTSWSWEGGSSDVKSYANAALQFTGTQLSSISSIPSTWKWTYSGSDIVADVAYDMFLGSTADASSDEYEIMVWLAALGGAGPISSTGSTIATPTINGVTWDLYTGPNGDTTVYSFVAQSTTEDFSGDLNDFFTYLVDNEGVSDSLYLTTLEAGTEPFTGSDAELKVSEYSVSIE

Annotated regions:
Protein sequence:
MSDKTQNTKPVAELNVEQVKEALIEEGKKKGILTYAKIAARLAPFTLDSDQMDEYLEHVGEAGIEVSDDADDEDPDETELVKEETESFDLTDMSVPPGVKINDPVRMYLKEIGRVDLLTADEEIALAKRIEAGDIEAKGRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLMKAVEKFDFNKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRSLLQDLGRDPSPEEIGEEMDLPTEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDATSPSDHAAYELLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGRVFGVTRERIRQIEAKALRKLRHPSRSKQLKDFLE

Annotated regions:
phrase: ETINKLIRVQRSLLQDLGRDPSPEEIGEEMDLPTEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDATSPSD
type: DOMAIN
name: RNA_pol_sigma70_r3
description: RNA polymerase sigma-70 region 3

phrase: TLEEVGRVFGVTRERIRQIEAKALRK
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: DLIQEGNMGLMKA
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: AKGRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLMKAVEKFDFNKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRSLLQDLGRDPSPEEIGEEMDLPTEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDATSPSDHAAYELLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGRVFGVTRERIRQIEAKALRKLRHPSRSKQLKDF
type: DOMAIN
name: RNA_pol_sigma_RpoD_C
description: RNA polymerase sigma factor RpoD, C-terminal

phrase: DPVRMYLKEIGRVDLLTADEEIALAKRIEAG
type: DOMAIN
name: RNA_pol_sigma70_r1_2
description: RNA polymerase sigma-70 region 1.2

phrase: LAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLMKAVEKFDFNKGFKFSTYATWWIRQAITRAIADQAR
type: DOMAIN
name: RNA_pol_sigma70_r2
description: RNA polymerase sigma-70 region 2

phrase: KGRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLMKAVEKFDFNKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRSLLQDLGRDPSPEEIGEEMDLPTEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDATSPSDHAAYELLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGRVFGVTRERIRQIEAKALRKLR
type: DOMAIN
name: RNA_pol_sigma-70_dom
description: RNA polymerase sigma-70-like domain

phrase: VLDTLTDREENVLRLRFGLDDGRTRTLEEVGRVFGVTRERIRQIEAKALRKLR
type: DOMAIN
name: RNA_pol_sigma70_r4
description: RNA polymerase sigma-70 region 4

phrase: NVEQVKEALIEEGKKKGILTYAKIAARLAPFTLDSDQMDEYLEHVGEAGIEVSDDADDEDPDETELVKEET
type: DOMAIN
name: RNA_pol_sigma_70_r1_1
description: RNA polymerase sigma factor 70, region 1.1

phrase: DLIQEGNMGLMKA
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: FSTYATWW
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: LTDREENVLRLR
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: TLEEVGRVFGVTRER
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: IRQIEAKALRK
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70
Protein sequence:
MNERSPPRRPATFRLDDPGVVVTEADETARLGRGTIQITPEHDPATLPVPIEAVLPARRGLPWGALFWSGLAGLTLLGVGLGVVHLIEDLFARSESLGFVGLAFAFVTALALAVVIGREAYGLARLATIEKLHQRAAAVLASDDRKESRVIVQDLLKIAHQNPQLARARATLESHTGEIIDGADMIRLAERELMSPLDAEARRLVSSAAQKVSIVTAVSPRAAIDVMFVFVAALRLIRQLAYLYGGRPGALGMIRLLRHVIAHLAITGGMAASDSLVQQMLGHGIAAKLSQRLGEGVLNGLLTARLGLAAIEVTRPLPFAALPPPKLSDLATDLLRKKEDEEE

Annotated regions:
Protein sequence:
MSSGKIAQVVGPVVDVMFASGDKLPEINNALIVYKDSDKKQKIVLEVALELGDGMVRTIAMESTDGLTRGLEVLDTGRAISVPVGKETLGRVFNVLGETIDLEEPFAEDVDRQPIHKKAPSFDELSTSSEILETGIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVESQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERITSTQKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLASSSRALSPEIVGEEHYAVATEVQRVLQRYRELQDIIAILGMDELSDEEKTLVGRARRIQFFLSQNFNVAEQFTGLPGSYVPVAETVRGFKEILEGKYDHLPEDAFRSVGPIEDVIKKAEKMGF

Annotated regions:
phrase: GIKVIDLLAPYLKGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVESQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERITSTQKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTTNLERKLTQMGIYPAVDPLASS
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_nucl-bd
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain

phrase: PEIVGEEHYAVATEVQRVLQRYRELQDIIAILGMDELSDEEKTLVGRARRIQFFLSQNFNVAEQFTGLPGSYVPVAETVRGFKEILEGKY
type: DOMAIN
name: ATP-synt_VA_C
description: ATP synthase A/B type, C-terminal domain

phrase: KGGKVGLFGGAGVGKTVLIQELIHNIAQEHGGISVFTGVGERTREGNDLYWEMKESGVIEKTAMVFGQMNEPPGARMRVALTGLTIAEYFRDVESQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGQLQERITSTQKGSVTSIQAIYVPADDYTDPAPATAFAHLDSTTNLERK
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: PAVDPLASS
type: ACTIVE_SITE
name: ATPase_a/bsu_AS
description: ATPase, alpha/beta subunit, nucleotide-binding domain, active site

phrase: IAQVVGPVVDVMFASGDKLPEINNALIVYKDSDKKQKIVLEVALELGDGMVRTIAMESTDGLTRGLEVLDT
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_N
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain
Protein sequence:
MMEAIKKKMQMLKLDKENVLDRAEQAEAEQKQAEERSKQLEDELATMQKKLKGTEDELDKYSEALKDAQEKLELAEKKAADAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRALKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIEGDLERTEERAELAESKCSELEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKILTDKLKEAETRAEFAERSVAKLEKTIDDLEDELYAQKLKYKAISDELDHALNDMTSI

Annotated regions:
Protein sequence:
MMIIEEYTPVPNTAFDFKIPDLIEMQLSSFRIFLKKGLIEELKDFSVISNSKKNLELRFFPEKYKLKRPKYNERTSIRRASTYTCQLYVPAKLTNKRTGEIQEQDVFLGEIPLMTGRGSFIINGSSRVIVNQIVRSPGIYYKREIDKKGRKTHSATIISNRGAWLRIETDKNGLIWARIGKIRKVSIMIVFKAMGLTKNEIFDALKYPQFLKKTIQETDPYLENDIQHDDDFENESTSTLLSTREILESRFFQSKYYDLGKVGRYKINKKLQLNIPENIRVLTVQDILAAVDYLINLEFNIGTLDDIDHLKNRRVRSVGELIQNQVRVGLGRLERMIYKRMGESSPDSLTLTSLVNPKPLVGAIREFFGSSQLSQFMDQTNPLSEITHKRRLSCLGPGGLSRERAGLAVRDIHPSHYGRICPIETPEGPNAGLIGSLATHSRVNEYGFLESPFYITKNRKVIKSELPIYLAPDQEDQFKVAPGDLLLSCYSSIENNYVPVRYKQEFTTSKAEEVDYVGISPTQAISIATSLIPFLEHDDANRALMGSNMQRQAVPLLKPNRPIVGTGFEEQVALDSGTVVICRHKGIVISVDSKTILVRSLRMNAKGIQHSHIDRYYLQKYNRSNQDTCINQKPVVSQGEWVQKGDILADGSATVNGELTLGQNILVAYMPWEGYNFEDAILISEKLVYEDIYTSIHIEKYEVDARKTKLGPEKITREIPNVNDHLLRNLDDNGIVIPGARVESGDILVGKVTPKEDLDQHPEGKLLRAIFGEKARDVRDSSLRVPNGVSGTVVNVRRLTGKELPSGVIMMVHVSISQKRKIQVGDKMAGRHGNKGIISKILPRQDMPYLQDGTPVDMVLNPLGVPSRMNVGQVFECLLGLAGEYLSENYKLMPFDEMYGKETSRGLVYSKLYEARQKTGYPWLFNIQSPGKSKLFDGRTGESFDQPVTIGKAYMLKLVHLVDDKIHARSTGPYSLVTQQPLGGRAKHGGQRLGEMEVWALEGFGAAYTLQELLTIKSDDMKGRNDALNAIIKGRPIPKPGTPESFKVLIRELQSLCLDIGVYKVHKSNKNQEIDLMQNF

Annotated regions:
phrase: KVIKSELPIYLAPDQEDQFKVAPGDLLLSCYSSIENNYVPVRYKQEFTTSKAEEVDYVGI
type: DOMAIN
name: DNA-dir_RNA_pol_bsu_external_1
description: DNA-directed RNA polymerase, beta subunit, external 1 domain

phrase: CRHKGIVISVDSKTILVRSLRMNAKGIQHSHIDRYYLQKYNRSNQDTCINQKPVVSQGEWVQKGDILADGSATVNGELTLGQNILVAYMPWEGYNFEDAILISEKLVYEDIYTSIHIEKYEVDARKTKLGPEKITREIPNVNDHLLRNLDDNGIVIPGARVESGDILVGKVTPKEDLDQHPEGKLLRAIFGEKARDVRDSSLRVPNGVSGTVVNVRRLTGKELPSGVIMMVHVSISQKRKIQVGDKMAGRHGNKGIISKILPRQDMPYLQDGTPVDMVLNPLGVPSRMNVGQVFECLLGLAGEYLSENYKLMPFDEMYGKETSRGLVYSKLYEARQKTGYPWLFNIQSPGKSKLFDGRTGESFDQPVTIGKAYMLKLVHLVDDKIHARSTGPYSLVTQQPLGGRA
type: DOMAIN
name: DNA-dir_RNAP_su2_dom
description: DNA-directed RNA polymerase, subunit 2, hybrid-binding domain

phrase: RSPGIYYKREIDKKGRKTHSATIISNRGAWLRIETDKNGLIWARIGKIRKVSIMIVFKAMGLTKNEIFDALKYPQFLKKTIQETDPYLENDIQHDDDFENESTSTLLSTREILESRFFQSKYYDLGKVGRYKINKKLQLNIPENIRVLTVQDILAAVDYLINLEFNIGTLDDIDHLKNRRV
type: DOMAIN
name: RNA_pol_Rpb2_2
description: RNA polymerase Rpb2, domain 2

phrase: GDKMAGRHGNKG
type: CONSERVED_SITE
name: RNA_pol_bsu_CS
description: RNA polymerase, beta subunit, conserved site

phrase: GGQRLGEMEVWALEGFGAAYTLQELLTIKSDDMKGRNDALNAIIKGRPIPKPGTPESFKVLIRELQSLCLDIGV
type: DOMAIN
name: RNA_pol_Rpb2_7
description: RNA polymerase Rpb2, domain 7

phrase: QFMDQTNPLSEITHKRRLSCLGPGGLSRERAGLAVRDIHPSHYGRICPIETPEGPNAGLIGSLATHSR
type: DOMAIN
name: RNA_pol_Rpb2_3
description: RNA polymerase Rpb2, domain 3

phrase: LIEMQLSSFRIFLKKGLIEELKDFSVISNSKKNLELRFFPEKYKLKRPKYNERTSIRRASTYTCQLYVPAKLTNKRTGEIQEQDVFLGEIPLMTGRGSFIINGSSRVIVNQIVRSPGIYYKREIDKKGRKTHSATIISNRGAWLRIETDKNGLIWARIGKIRKVSIMIVFKAMGLTKNEIFDALKYPQFLKKTIQETDPYLENDIQHDDDFENESTSTLLSTREILESRFFQSKYYDLGKVGRYKINKKLQLNIPENIRVLTVQDILAAVDYLINLEFNIGTLDDIDHLKNRRVRSVGELIQNQVRVGLGRLERMIYKRMGESSPDSLTLTSLVNP
type: DOMAIN
name: RNA_pol_bsu_protrusion
description: RNA polymerase, beta subunit, protrusion
Protein sequence:
MAFDLDTIRSAAQRVASSHGLDVVDVEYQGGAKHRMLRIFIEKNAEERAKLAAQSSGRVETIEVHEEMPREGMNPEHFSGVTHEDCSAFSTDFGTLLDVEELMPGASEYTLEVSSPGLDRKLQSRADYERFAGSLVKLSTFEPVNGNRHWQGRMAGLDGDTLRLDLTAMKQKGKGKEKKSAAETVEIALGNVEKAQLIPEI

Annotated regions:
phrase: GLDRKLQSRADYERFAGSLVKLSTFEPVNGNRHWQGRMAGLDGDTLRLDLTAMKQKGKGKEKKSAAETVEIALGNVEKAQLIPE
type: DOMAIN
name: RimP_C
description: Ribosome maturation factor RimP, C-terminal

phrase: LQSRADYERFAGSLVKLSTFEPVNGNRHWQGRMAGLDGDTLRLDLTAMKQKGKGKEKKSAAETVEIALGNVEKAQLIP
type: DOMAIN
name: RimP_C
description: Ribosome maturation factor RimP, C-terminal

phrase: SGVTHEDCSAFSTDFGTLLDVEELMPGASEYTLEVSSPGL
type: DOMAIN
name: RimP_N
description: Ribosome maturation factor RimP, N-terminal
Protein sequence:
MSHHSSWRGHHCAPGDINCTAGFKESLGSRNYKLLHVPVHGPTHSHHHDPPHPFPTVDVPDHAHYIIGSVILIVGITGVIGNALVVYVFCRSRTLRTAGNMFIVNLAVADFLMSVTQSPVFFAASLHRRWVFGERPCELYAFCGALFGICSMMTLTAIAADRCLAITQPLALVSRVSRRKAGAVLVVVWLYSLGWSLPPFFGWSAYVPEGLQTSCSWDYMTFTPSVRAYTILLFVFVFFIPLGIIGSCYFAIFQTIRAAGKEIRELDCGETHKVYERMQNEWKMAKVALVVIVLFIISWSPYSVVALTATAGYSHFLTPYMNSVPAVIAKASAIHNPIIYAITHPKYRVAIARYIPVLRPILRVKEKDLRSSFSSGSVSSRRPTLTSQCSLGVSMGNAARANGRWGKTRLSSASDSDSCWTESEADGSSVSSLTFGRRVSTEISTDTVILSSGSSVSNASGQKSERAHKVISVPVPSITFETDAADGESLSDGKALLGGN

Annotated regions:
phrase: VPAVIAKASAIHNPII
type: BINDING_SITE
name: Retinal_BS
description: Visual pigments (opsins) retinal binding site

phrase: GNALVVYVFCRSRTLRTAGNMFIVNLAVADFLMSVTQSPVFFAASLHRRWVFGERPCELYAFCGALFGICSMMTLTAIAADRCLAITQPLALVSRVSRRKAGAVLVVVWLYSLGWSLPPFFGWSAYVPEGLQTSCSWDYMTFTPSVRAYTILLFVFVFFIPLGIIGSCYFAIFQTIRAAGKEIRELDCGETHKVYERMQNEWKMAKVALVVIVLFIISWSPYSVVALTATAGYSHFLTPYMNSVPAVIAKASAIHNPII
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM