nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MRLSQMLFVTLRDDPADAEIPSHKLLVRAGFIRRLGSGLYAYLPLIWRVLEKVKRIVQEEMNRTGAQECLLPQLQPSELWKMSGRWDTYTESEGIMFALRDRLERELGLGPTHEEVITAIAKEMIRSYRQLPVNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHSDEASLKATYGAMDQAYRNIFSRCGLDFRPVDADSGAIGGSGSQEFMVLADAGEDEILYTEDGLYSANVEKAVSLAPDAKPSPFSGYKKQSAPNTATIAKMCQCLDCDASNVVKNVLYQAVYNSGKAVLVLVSIRGDQEVNEVKLTNELTKLAPHYESTNILSLTVPDEKEQQKWAAKPLPLGYISPGISDDYIATNKQVADKFLRLVDQTAVDLTNFATGADAVDYHVTGANWSTDFTLPKLVVDVRKALAGDRPVHDPTGELKTARGIEVGHIFQLGTKYSQAMGATFTNEQGEEKPLVMGCYGIGVSRLAQAAVEQSYDKDGIIWPTAIAPYEVVIVVPNVGDEEQMQVAEQIYTEFQAAEVDVLLDDRNERAGVKFKDSELIGIPYRVVTGKSLKQGQLEVVKRADKSVQNLAIAAVVPTLTAWIKAEKKTS

Annotated regions:
phrase: VVIVVPNVGDEEQMQVAEQIYTEFQAAEVDVLLDDRNERAGVKFKDSELIGIPYRVVTGKSLKQGQLEVVKRADKSVQNLAIAAVVPTL
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: RRLGSGLYAYLPLIWRVLEKVKRIVQEEMNRTGAQECLLPQLQPSELWKMSGRWDTYTESEGIMFALRDRLERELGLGPTHEEVITAIAKEMIRSYRQLPVNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHSDEASLKATYGAMDQAYRNIFSRCGLDFRPVDADSGAIGGSGSQEFMVLADAGEDEILYTEDGLYSANVEKAVSLAPDAKPSPFSGYKKQSAPNTATIAKMCQCLDCDASNVVKNVLYQAVYNSGKAVLVLVSIRGDQEVNEVKLTNELTKLAPHYESTNILSLTVPDEKEQQKWAAKPLPLGYISPGISDDYIATNKQVADKFLRLVDQTAVDLTNFATGADAVDYHVTGANWSTDFTLPKLVVDVRKALAGDRPVHDPTGELKTARGIEVGHIFQLGTKYSQAMGATFTNEQGEEKPLVMGCYGIGVSRLAQAAVEQSYDKDGIIWPTAIAPYEVVIVV
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: PYEVVIVVPNVGDEEQMQVAEQIYTEFQAAEVDVLLDDRNERAGVKFKDSELIGIPYRVVTGKSLKQGQLEVVKRADKSVQNLAIAAVVPTL
type: DOMAIN
name: ProRS_anticodon_short
description: Proline--tRNA ligase, anticodon binding domain

phrase: DAEIPSHKLLVRAGFIRRLGSGLYAYLPLIWRVLEKVKRIVQEEMNRTGAQECLLPQLQPSELWKMSGRWDTYTESEGIMFALRDRLERELGLGPTHEEVITAIAKEMIRSYRQLPVNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHSDEASLKATYGAMDQAYRNIFSRCGLDFRPVDADSGAIGGSGSQEFMVLA
type: DOMAIN
name: ProRS_core_prok
description: Prokaryote proline-tRNA ligase core domain

phrase: FALRDRLERELGLGPTHEEVITAIAKEMIRSYRQLPVNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHSDEASLKATYGAMDQAYRNIFSRCGLDFRPVDADSGAIGGSGSQEFMVLADAGEDEILYTEDGLYSANVEKAVSLAPDAKPSPFSGYKKQSAPNTATIAKMCQCLDCDASNVVKNVLYQAVYNSGKAVLVLVSIRGDQEVNEVKLTNELTKLAPHYESTNILSLTVPDEKEQQKWAAKPLPLGYISPGISDDYIATNKQVADKFLRLVDQTAVDLTNFATGADAVDYHVTGANWSTDFTLPKLVVDVRKALAGDRPVHDPTGELKTARGIEVGHIFQLGTKYSQAMGATFTNEQGEEKPLVMGCYGIGVSRLAQAAVE
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: PNTATIAKMCQCLDCDASNVVKNVLYQAVYNSGKAVLVLVSIRGDQEVNEVKLTNELTKLAPHYESTNILSLTVPDEKEQQKWAAKPLPLGYISPGISDDYIATNKQVADKFLRLVDQTAVDLTNFATGADAVDYHVTGAN
type: DOMAIN
name: YbaK/aa-tRNA-synth-assoc-dom
description: YbaK/aminoacyl-tRNA synthetase-associated domain
Protein sequence:
MTAVVNIAAYKFVSIANPADLREPMLEQAGQRQLKGTVLLAPEGINLFLAGAADAIEGFLRWLRADARFADLQAKYSESARMPFRKLLVKVKREIIRMDHPAIRPEAGRAPAVDAATLRRWLAQGRELVMLDTRNAFEVEVGTFRGALDWRIERFTQFPQAVRDNQAALAGKTVVSFCMGGIRCEKAAIYMAEAGIEHVYQLEGGILKYFEETDGAGFDGACFVFDERVALDAALAPQA

Annotated regions:
phrase: ATLRRWLAQGRELVMLDTRNAFEVEVGTFRGALDWRIERFTQFPQAVRDNQAALAGKTVVSFCMGGIRCEKAAIYMAEAGIEHVYQLEGGILKY
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain

phrase: DAATLRRWLAQGRELVMLDTRNAFEVEVGTFRGALDWRIERFTQFPQAVRDNQAALAGKTVVSFCMGGIRCEKAAIYMAEAGIEHVYQLEGGILKYFEETD
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain

phrase: QGRELVMLDTRNAFEVEVGTFRGALDWRIERFTQFPQAVRDNQAALAGKTVVSFCMGGIRCEKAAIYMAEAGIEHVYQLEGGILKYFEET
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain

phrase: VNIAAYKFVSIANPADLREPMLEQAGQRQLKGTVLLAPEGINLFLAGAADAIEGFLRWLRADARFADLQAKYSESARMPFRKLLVKVKRE
type: DOMAIN
name: TRHO_N
description: tRNA uridine(34) hydroxylase, N-terminal
Protein sequence:
MGIKDWPDGEGPREKLLKLGVGPLSDAELLAVVLRNGVQGLSAVELARNLIGQFGGLRELLTASEIEVCRMPGMGPVKFAQLQAAAELSKRISQQNLKRGKILSDPDLTRDYLMRQLADRAYEVFAILLLDSQHRVIQFVELFRGTIDSASVYPRDVVCLVLEKKAAAVIVCHNHPSGVAEPSLADRRITERLKFALETIDVSLLDHMVVGDREIVSFAERGWID

Annotated regions:
phrase: IKDWPDGEGPREKLLKLGVGPLSDAELLAVVLRNGVQGLSAVELARNLIGQFGGLRELLTASEIEVCRMPGMGPVK
type: DOMAIN
name: UPF0758_N
description: UPF0758, N-terminal

phrase: SDPDLTRDYLMRQLADRAYEVFAILLLDSQHRVIQFVELFRGTIDSASVYPRDVVCLVLEKKAAAVIVCHNHPSGVAEPSLADRRITERLKFALETIDVSLLDHMVVGDREIVSFAERG
type: DOMAIN
name: RadC_JAB
description: RadC-like JAB domain

phrase: RDYLMRQLADRAYEVFAILLLDSQHRVIQFVELFRGTIDSASVYPRDVVCLVLEKKAAAVIVCHNHPSGVAEPSLADRRITERLKFALETIDVSLLDHMVVGDREIVSF
type: DOMAIN
name: RadC_JAB
description: RadC-like JAB domain

phrase: HNHPS
type: CONSERVED_SITE
name: UPF0758_CS
description: Uncharacterised protein family UPF0758, conserved site

phrase: ILSDPDLTRDYLMRQLADRAYEVFAILLLDSQHRVIQFVELFRGTIDSASVYPRDVVCLVLEKKAAAVIVCHNHPSGVAEPSLADRRITERLKFALETIDVSLLDHMVVGDREIVSFAERGW
type: DOMAIN
name: MPN
description: MPN domain
Protein sequence:
MGQKVNPIGFRLGVIRTWDSRWYAEADYAKLLHEDIKLRNFLKKRLFNSGVSKIEIERAASKAKINIFTARPGLIIGKKGAEVETLKKELAKLTDKEIYLNIQEVRKPELDAQLVSENVALQLERRVAFRRAMKKSVTSALKFGAKGIRITCSGRLGGAEMSRTEWYREGRVPLHTLRADIDYGFAEAKTTYGIIGVKVLIFKGEVLPGQK

Annotated regions:
phrase: KLRNFLKKRLFNSGVSKIEIERAASKAKINIFTARPGLIIGKKGAEVETLKKELAKLTDKEIYLNIQEVRKPE
type: DOMAIN
name: KH_dom_type_2
description: K Homology domain, type 2

phrase: AASKAKINIFTARPGLIIGKKGAEVETLKKELAKLTDKEIYLNIQEVRKPELDAQLVSENVALQL
type: DOMAIN
name: KH_dom
description: K Homology domain

phrase: SRTEWYREGRVPLHTLRADIDYGFAEAKTTYGII
type: CONSERVED_SITE
name: Ribosomal_uS3_CS
description: Small ribosomal subunit protein uS3, conserved site

phrase: VALQLERRVAFRRAMKKSVTSALKFGAKGIRITCSGRLGGAEMSRTEWYREGRVPLHTLRADIDYGFAEAKTTYGIIGVKVL
type: DOMAIN
name: Ribosomal_uS3_C
description: Small ribosomal subunit protein uS3, C-terminal

phrase: LRNFLKKRLFNSGVSKIEIERAASKAKINIFTARPGLIIGKKGAEVETLKKELAKLTDKEIYLNIQEV
type: DOMAIN
name: KH_dom_type_2
description: K Homology domain, type 2
Protein sequence:
MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVAGEENQYIAYVAYPLDLFEEGSVTNMFTSIVGXVFGFKALRALRLEDLRIPPAYVKTFQGPPHGIQVERDKLNKXGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEALFKAQAETGEIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGIHFRVLAKALRMSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDFIEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTIGHPWGNAPGAVAGRVALEACVQARNEGRDLAREGNAIILEASKWSPELAAAC

Annotated regions:
phrase: YYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVAGEENQYIAYVAYPLDLFEEGSVTNMFTSIVGXVFGFKALRALRLEDLRIPPA
type: DOMAIN
name: RuBisCO_lsu_fd_N
description: Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal

phrase: GLDFTKDD
type: ACTIVE_SITE
name: RuBisCo_large_chain_AS
description: Ribulose bisphosphate carboxylase, large chain, active site

phrase: GIQVERDKLNKXGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEALFKAQAETGEIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGIHFRVLAKALRMSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDFIEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTIGHPWGNAPGAVAGRVALEACVQARNEGRDLAREGNAIILEASKWSPELAAA
type: DOMAIN
name: RuBisCO_lsu_C
description: Ribulose bisphosphate carboxylase, large subunit, C-terminal
Protein sequence:
MNTPVNLLDFDVDGLIAWFAERGEKPFRARQVMRWMHREGCKDFAAMTDVAKALRARLAEEASIRPPVPVRDSVSADGTRKWLLDVGNSNAVETVFIPETNRGTLCISSQAGCALDCAFCSTGKQGFNRNLSAGEIIGQLWLANHLLGAAREAEAGLEAGDKDNGRIISNVVMMGMGEPLANFDNVVTALRLMLDDHAYGLSRRRVTVSTSGIVPAMDRLRDECPVALAVSLHASNDALRDRLVPINVKYPLVELMAACRRYLDKAPRDFVTFEYVMLEGVNDEPAHARELIELVREVPCKFNLIPFNPFPNSGFQRSAPERIRRFAGILIDAGIVTTTRKTRGDDVDAACGQLAGQVQDKTRRTVRLKQTLEVRS

Annotated regions:
phrase: VNLLDFDVDGLIAWFAERGEKPFRARQVMRWMHREGCKDFAAMTDVAKALRARLAEEAS
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: SSQAGCALDCAFCSTGKQGFNRNLSAGEIIGQLWLANHLLGAAREAEAGLEAGDKDNGRIISNVVMMGMGEPLANFDNVVTALRLMLDDHAYGLSRRRVTVSTSGIVPAMDRLRDECPVALAVSLHASNDALRDRLVPINVKYPLVELMAACRRYLDKAPRDFVTFEYVMLEGVNDEP
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: ETNRGTLCISSQAGCALDCAFCSTGKQGFNRNLSAGEIIGQLWLANHLLGAAREAEAGLEAGDKDNGRIISNVVMMGMGEPLANFDNVVTALRLMLDDHAYGLSRRRVTVSTSGIVPAMDRLRDECPVALAVSLHASNDALRDRLVPINVKYPLVELMAACRRYLDKAPRDFVTFEYVMLEGVNDEPAHARELIELVREVPCKFNLIPFNPFPNSGFQRSAPERIRRFAGILIDAGIVTTTRKTRGD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: NTPVNLLDFDVDGLIAWFAERGEKPFRARQVMRWMHREGCKDFAAMTDVAKALRARLAEEASIRPPVPVRDSVSADGTRKWLLDVGNSNAVETVFIPETNRGTLCISSQAGCALDCAFCSTGKQGFNRNLSAGEIIGQLWLANHLLGAAREAEAGLEAGDKDNGRIISNVVMMGMGEPLANFDNVVTALRLMLDDHAYGLSRRRVTVSTSGIVPAMDRLRDECPVALAVSLHASNDALRDRLVPINVKYPLVELMAACRRYLDKAPRDFVTFEYVMLEGVNDEPAHARELIELVREVPCKFNLIPFNPFPNSGFQRSAPERIRRFAGILIDAGIVTTTRKTRGDDVDAACGQLAGQVQDKTRR
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MFGVYRVFVLLVFVSQLCNGFYLPGSYMHTYSDGDSIFAKVNSLTSIETELPFSYYSLPYCQPLEGIKKSAENLGELLMGDQIDNSAYRFRMRTNESLYLCTTSPLNEHEVKLLKQRTRELYQVNMILDNLPALRFAKQNGVTIQWTGYPVGYSPPNSNDDYIINHLKFKVLVHEYEGNVMEVIGTGEEGMGVISEADKKKALGYEIVGFEVVPCSVKYDAEKMTKLHMYDPVPSVNCPLELDKAQIIKEHERITFTYEVEFVKSETRWPSRWDAYLKMEGARVHWFSILNSLMVIFFLAGIVFVIFLRTVRRDLTKYEELDKEAQAQMNEELSGWKLVVGDVFREPEMSKLLCIMVGDGVRITGMAVVTIVFAALGFMSPASRGMLLTGMIILYLFLGIVAGYAGVRLWRTVKGTSEGWRSLSWSIACFFPGIAFVILTVLNFLLWSSNSTGAIPISLYFELLALWFCISVPLTLFGGFLGTRAEAIQFPVRTNQIPREIPERKYPSWLLVLGAGTLPFGTLFIELFFIFSSIWLGRFYYVFGFLLIVLLLLVVVCAEVSVVLTYMHLCVEDWRWWWKAFYASGSVALYVFAYSINYLVFDLQSLSGPVSAMLYIGYSLLMAIAIMLATGTIGFLTSFYFVHYLFSSVKID

Annotated regions:
Protein sequence:
MRSATPKVLHPLGGRSMLGHVLAAAAPLGAGVTVVVVGAGRELVREHLAAVAPDALPVVQEEQRGSGHAAAVALAAVPDLTGPVLLVNGDAPLLRASTVARLVEEHRSRENALTVLTAEVEDPTGLGRIVRDADGSVRAIVEQRDATDEQRAIREINAGVYVGDAAAVRSALGRIDADNDQGELYFTDVLALLVGDGARVGGVIAEDPDDVLGCNDRVELAARRRTLNDRVLDDLMRSGVTVVDPLTTWVDVTVTVGRDAVLEPGTHLQGATSVGDAAHVGPDTTLVDCTVADGASVVRSHCLGAAIGPGATVGPFSYLRPGTDLGRGAKVGAFVETKNVQVGEGSKVPHLSYVGDATIGTGSNIGAATVFVNYDGVAKHRTMIGDHVRVGSDTMLVAPVTVGDGAYTAAGSVITSDVPPGAMGVARAAQRNVAGWVRRRRPGTPAAQAAEAAENRAGALREESSGPSRADTDS

Annotated regions:
phrase: SATPKVLHPLGGRSMLGHVLAAAAPLGAGVTVVVVGAGRELVREHLAAVAPDALPVVQEEQRGSGHAAAVALAAVPDLTGPVLLVNGDAPLLRASTVARLVEEHRSRENALTVLTAEVE
type: DOMAIN
name: MobA-like_NTP_Trfase
description: MobA-like NTP transferase

phrase: TMIGDHVRVGSDTMLVAPVTVGDGAYTAAGSVI
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: GVTVVDPLTTWVDVTVTVGRDAVLEPGTHLQGATSVGDAAHVGPDTTLVDCTVADGASVVRSHCLGAAIGPGATVGPFSYLRPGTDLGRGAKVGAFVETKNVQVGEGSKVPHLSYVGDATIGTGSNIGAATVFVNYDGVAKHRTMIGDHVRVGSDTMLVAPVTVGDGAYTAAGSVITSDVPPGAMGVARAA
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain
Protein sequence:
MDKFVIQGGVKLEGEVRISGAKNAALPLLAAMILADTPITLKNVPDLKDVRTLVKLIGGLGITMSYEGETVIANTSTLDNQFAPYELVKTMRASILVLGPLLARYGSAKVSLPGGCAIGSRPVDQHLKALEALGAQIEVEAGYVHAKVDGRLKGGEVIFDMVTVGGTENILTAAVLAEGVTTIRNAAREPEITDLALMLIKMGAKIEGLDTDTLVVTGVESLHGCEYSVVADRIETGSYLAAAAITGGKVKTTHTDPNLLESVLDKFEEMGAEVTRGEDWIELDMLGKRPKAVSFRTLPHPEFPTDMQAQIMAVNAIGRGFATISETIFENRFMHVPELARMGANIQVEGNDAVVTGVEKLSAAPVMATDLRASFSLVLAALAAEGETIIDRIYHIDRGYEDIEAKLQGLGAQIKRVSE

Annotated regions:
phrase: QGGVKLEGEVRISGAKNAALPLLAAMILADTPITLKNVPDLKDVRTLVKLIGGLGITMSYEGETVIANTSTLDNQFAPYELVKTMRASILVLGPLLARYGSAKVSLPGGCAIGSRPVDQHLKALEALGAQIEVEAGYVHAKVDGRLKGGEVIFDMVTVGGTENILTAAVLAEGVTTIRNAAREPEITDLALMLIKMGAKIEGLDTDTLVVTGVESLHGCEYSVVADRIETGSYLAAAAITGGKVKTTHTDPNLLESVLDKFEEMGAEVTRGEDWIELDMLGKRPKAVSFRTLPHPEFPTDMQAQIMAVNAIGRGFATISETIFENRFMHVPELARMGANIQVEGNDAVVTGVEKLSAAPVMATDLRASFSLVLAALAAEGETIIDRIYHIDRGYEDIEAK
type: DOMAIN
name: Enolpyruvate_Tfrase_dom
description: Enolpyruvate transferase domain
Protein sequence:
MNDMMKNIVLWVVIAIVLMSVFNNFGPQNSKSGEMDYSTFISNVKNGAVSNVEIQGRTISGELTDGNQFTTYSPDYDPGLIGDLLDNGVTIQAEPVEKTSLFMQIFISWFPMLLLIAVWIFFMRQMQGGGGKNPMSFGKSKARMLSDDQVKVTFKDVAGVEEAKEEVAELVDFLRDPSKFQKLGGRIPRGILMVGSPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRHRGAGLGGGNDEREQTLNQLLVEMDGFEGNEGVIVIAATNRPDVLDPALLRPGRFDRQVVVPLPDIRGREQIINVHLRKVPAAEDVDARVIARGTPGFSGADLANLVNEAALFAARANKRLVSMEQLELAKDKIMMGAERRSMVMSDKEKELTAYHEAGHAIVGRLVPGHDPVYKVSIIPRGRALGVTMFLPTEDRYSYTKQQLESQISSLYGGRLAEEMIFGQEAVTTGASNDIQRATELAHNMVTKWGLSDNMGPLSYGEDEGEVFLGRSVTQHKSVSDLTAKQIDEDVRAVINRNYDRAQQLLNDNMEKLHTMAQLLIKYETIDSGQIDAIMEGREPGEPKDWNDRSTPPSASPEPDESETPSGKPADQLH

Annotated regions:
phrase: IVLWVVIAIVLMSVFNNFGPQNSKSGEMDYSTFISNVKNGAVSNVEIQGRTISGELTDGNQFTTYSPDYDPGLIGDLLDNGVTIQAE
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular

phrase: IPRGILMVGSPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRHRGAGLGGGNDEREQTLNQLLVEMDGFEGNEGVIVIAATNRPDVLDPALLRPGRFDRQVVVPLP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VIVIAATNRPDVLDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: DVDARVIARGTPGFSGADLANLVNEAALFAARANKRLVSMEQL
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: MVMSDKEKELTAYHEAGHAIVGRLVPGHDPVYKVSIIPRGRALGVTMFLPTEDRYSYTKQQLESQISSLYGGRLAEEMIFGQEAVTTGASNDIQRATELAHNMVTKWGLSDNMGPLSYGEDEGEVFLGRSVTQHKSVSDLTAKQIDEDVRAVINRNYDRAQQLLNDNMEKLHTMAQLLIKYETIDSGQID
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: ILMVGSPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKHAPCIIFIDEIDAVGRHRGAGLGGGNDEREQTLNQLLVEMDGFEGNEGVIVIAATNRPDVLDPALLRPGRFDRQVVVP
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core
Protein sequence:
MEMYETLGKVGEGSYGTVMKCKHKDTGRIVAIKIFYEKPEKSVNKIATREIKFLKQFRHENLVNLIEVFRQKKKIHLVFEFIDHTVLDELQHYCHGLESKRLRKYLFQILRAIEYLHNNNIIHRDIKPENILVSQSGITKLCDFGFARTLAAPGDVYTDYVATRWYRAPELVLKDTTYGKPVDIWALGCMIIEMATGNPYLPSSSDLDLLHKIVLKVGNLTPHLHNIFSKSPIFAGVVLPQVQHPKNARKKYPKLNGLLADIVHACLQIDPAERISSTDLLHHDYFTRDGFIEKFIPELRAKLLQEAKVNSFIKPKENFKENEPVRDEKKPVFTNPLLYGNPTLYGKEVDRDKRAKELKVRVIKAKGGKGDVPDLKKTESEGEHRQQGTAEDTHPTSLDRKPSVSELTNPVHPSANSDTVKEDPHSGGCMIMPPINLTSSNLLAANPSSNLSHPNSRLTERTKKRRTSSQTIGQTLSNSRQEDTGPTQVQTEKGAFNERTGQNDQIASGNKRKLNFSKCDRKEFHFPELPFTIQAKEMKGMEVKQIKVLKRESKKTDSPKIPTLLSMDSNQEKQEVFNIFPGWCKRGNLNWPS

Annotated regions:
phrase: YETLGKVGEGSYGTVMKCKHKDTGRIVAIKIFYEKPEKSVNKIATREIKFLKQFRHENLVNLIEVFRQKKKIHLVFEFIDHTVLDELQHYCHGLESKRLRKYLFQILRAIEYLHNNNIIHRDIKPENILVSQSGITKLCDFGFARTLAAPGDVYTDYVATRWYRAPELVLKDTTYGKPVDIWALGCMIIEMATGNPYLPSSSDLDLLHKIVLKVGNLTPHLHNIFSKSPIFAGVVLPQVQHPKNARKKYPKLNGLLADIVHACLQIDPAERISSTDLLHHDY
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: VGEGSYGTVMKCKHKDTGRIVAI
type: BINDING_SITE
name: Protein_kinase_ATP_BS
description: Protein kinase, ATP binding site

phrase: YETLGKVGEGSYGTVMKCKHKDTGRIVAIKIFYEKPEKSVNKIATREIKFLKQFRHENLVNLIEVFRQKKKIHLVFEFIDHTVLDELQHYCHGLESKRLRKYLFQILRAIEYLHNNNIIHRDIKPENILVSQSGITKLCDFGFARTLAAPGDVYTDYVATRWYRAPELVLKDTTYGKPVDIWALGCMIIEMATGNPYLPSSSDLDLLHKIVLKVGNLTPHLHNIFSKSPIFAGVVLPQVQHPKNARKKYPKLNGLLADIVHACLQIDPAERISSTDLLHHDY
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: YETLGKVGEGSYGTVMKCKHKDTGRIVAIKIFYEKPEKSVNKIATREIKFLKQFRHENLVNLIEVFRQKKKIHLVFEFIDHTVLDELQHYCHGLESKRLRKYLFQILRAIEYLHNNNIIHRDIKPENILVSQSGITKLCDFGFARTLAAPGDVYTDYVATRWYRAPELVLKDTTYGKPVDIWALGCMIIEMATGNPYLPSSSDLDLLHKIVLKVGNLTPHLHNIFSKSPIFAGVVLPQVQHPKNARKKYPKLNGLLADIVHACLQIDPAERISSTDLLHHDY
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: IIHRDIKPENIL
type: ACTIVE_SITE
name: Ser/Thr_kinase_AS
description: Serine/threonine-protein kinase, active site
Protein sequence:
MIISLTGGIGVGKSFVANCFQEFGAVVFDADSVVHQLYKVDKSIISYAEKNFPGVVVNGEIDRTVLSKYFLAYDENWKQFQSLVHSAVLRELEFFIAKEKKIDRKLLVLDVPLLLETKFYLYCDLIVFVHADSVVQAQRLNERNIDKEKLNLISDVQLSIEEKRKMSDFIIDTSVSKEYVFSQVKDIVDSLNLNT

Annotated regions:
Protein sequence:
MEKIIGLMSRDDWVYTGLLLFSFAASCYVRKLGNNILASGALGFAMALFIIGPRIAYSLGICAIAVGIQAFAPKKKVPFYVFLTTFTYLMFVRFAHYFLPVVEVASHTNVIQLIITLRIIGITFEENDAWLHKNDENATKRYLTRMPTLLEKFAYFYHFCGLFTGPYYTYQMLLDSQNPALQSWDPTPEVTSRFVRLLWSVPAFVITNHYFPLDSLRSDAIWEVSFFTRLVYAALIFVVFKTRVYSAWAIAESICVILGIGIYPAASNPKIIVGPTDLKVFEGLRDKENVEMNSDAIVNLDIPKVEFSDGFRDGMKAWNRSVQTWLALYVHSRVKFMRVETTMLVSAIWHGTYAGYFMSFGVVAMCAILEDVIFKLVPVNPETGLRPQWFRILYTHTIRCRGFEMLATGFLLKNASDVHHFWSSIYYWLPLLCVPFYIYSVKTAAPKLKLVV

Annotated regions:
Protein sequence:
MADQKIQIRLKAFDCRLIDRSAGEIVETAKRTGAHVRGPIPLPTKIERCTILVSPHADKDARDQYETCTYKRVLYIVDPNDKTVDALMKLELAAGVDVQIKLT

Annotated regions:
phrase: QIRLKAFDCRLIDRSAGEIVETAKRTGAHVRGPIPLPTKIERCTILVSPHADKDARDQYETCTYKRVLYIVDPNDKTVDALMKLELAAGVDVQI
type: DOMAIN
name: Ribosomal_uS10_dom
description: Small ribosomal subunit protein uS10 domain

phrase: QIRLKAFDCRLIDRSAGEIVETAKRTGAHVRGPIPLPTKIERCTILVSPHADKDARDQYETCTYKRVLYIVDPNDKTVDALMKLELAAGVDVQI
type: DOMAIN
name: Ribosomal_uS10_dom
description: Small ribosomal subunit protein uS10 domain

phrase: AKRTGAHVRGPIPLP
type: CONSERVED_SITE
name: Ribosomal_uS10_CS
description: Small ribosomal subunit protein uS10, conserved site
Protein sequence:
MTNSLSVIILAAGKGTRMQSAKPKVLQTLAGKPLLGHVLDTCDELTVAKTIVVYGFGGDQVQTAMDDKYAHLPITWVAQTEQLGTGHAVKVALEQLPKDGQSLILYGDVPLVSCQTLATLQAANTAGMSMLTLTVDNPFGLGRIKRDASGNIEAIVEQKDASTDEQSIQEINSGIYCVNNALLHKYLPELSNDNAQQEYYLTDIVKMAVADGVTIAAIEPEHTFEIEGVNNRQQLASLERTWQNKLVADLQEAGVQFADPTRVDIRGTLTAGQDVFVDVGVVFEGDCTLGDNVYIEAGCIIKNAQIGNACHLKPYCVIDRAEVGAGVDIGPFANLRPETVLSDNSKVGNFVEIKKSTIGHGSKINHLSYVGDATVGADVNVGAGVITCNYDGVNKSQTIIKDNAFIGSNASLVAPVTIGDTATIAAGSVITNDVDSNALGLGRARQVQKADFQRPTKKSK

Annotated regions:
phrase: VIILAAGKGTRMQSAKPKVLQTLAGKPLLGHVLDTCDELTVAKTIVVYGFGGDQVQTAMDDKYAHLPITWVAQTEQLGTGHAVKVALEQLPKDGQSLILYGDVPLVSCQTLATLQAA
type: DOMAIN
name: MobA-like_NTP_Trfase
description: MobA-like NTP transferase

phrase: TIIKDNAFIGSNASLVAPVTIGDTATIAAGSVIT
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: GQDVFVDVGVVFEGDCTLGDNVYIEAGCIIK
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: IGSNASLVAPVTIGDTATIAAGSVITND
type: CONSERVED_SITE
name: Hexapep_transf_CS
description: Hexapeptide transferase, conserved site

phrase: GVQFADPTRVDIRGTLTAGQDVFVDVGVVFEGDCTLGDNVYIEAGCIIKNAQIGNACHLKPYCVIDRAEVGAGVDIGPFANLRPETVLSDNSKVGNFVEIKKSTIGHGSKINHLSYVGDATVGADVNVGAGVITCNYDGVNKSQTIIKDNAFIGSNASLVAPVTIGDTATIAAGSVITNDVDSNALGLGRAR
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain
Protein sequence:
MRNTELVQWFRQSTPYVNMHREKTFVIMLDGNAIAHPNFINITNDISLLHSLGIKLVIVFGARCQIDELLAKNQMSSTYHKHIRITDSKTLEVVKQAVGGLHYDIFSRLSLRLPNSPVLNVVSSNAVLAQPLGVIDGVDYGLSGKIRRINIEGIQQQLAQDAIVVIGPIAPSVTGEMFNLPFEEIATQIAIKLKADKLIGFCDQQGILDSEGNVLSDLHPREAKRYLTQFIESGQYHHSAARFLQASIEVCHAGIKRSHLLSYKEDGSLLQELFSRDGIGTQLSEESSENIRLATSFDIPGLLNLIRPLEEQGILVKRSREQLEMEISNYTIIERDGIVIACAALNHYPEEKMAEMACVAVHPDYRDSSRGDVLLEAIKRRAYKLQVEKLFVLTTRTTQWFQERGFVLSTTDDLPKEKREHYNYQRMSKILILELSQ

Annotated regions:
phrase: RSREQLEMEISNYTIIERDGIVIACAALNHYPEEKMAEMACVAVHPDYRDSSRGDVLLEAIKRRAYKLQVEKLFVLTTRTTQW
type: DOMAIN
name: GNAT_dom
description: GNAT domain

phrase: ENIRLATSFDIPGLLNLIRPLEEQGILVKRSREQLEMEISNYTIIERDGIVIACAALNHYPEEKMAEMACVAVHPDYRDSSRGDVLLEAIKRRAYKLQVEKLFVLTTRTTQWFQERGFVLSTTDDLPKEKREHYNYQRMS
type: DOMAIN
name: GNAT_dom
description: GNAT domain

phrase: KTFVIMLDGNAIAHPNFINITNDISLLHSLGIKLVIVFGARCQIDELLAKNQMSSTYHKHIRITDSKTLEVVKQAVGGLHYDIFSRLSLRLPNSPVLNVVSSNAVLAQPLGVIDGVDYGLSGKIRRINIEGIQQQLAQDAIVVIGPIAPSVTGEMFNLPFEEIATQIAIKLKADKLIGFCDQQGILDSEGNVLSDLHPREAKRYLTQFIESGQYHHSAARFLQASIEVCHAGI
type: DOMAIN
name: Asp/Glu/Uridylate_kinase
description: Aspartate/glutamate/uridylate kinase

phrase: ELVQWFRQSTPYVNMHREKTFVIMLDGNAIAHPNFINITNDISLLHSLGIKLVIVFGARCQIDELLAKNQMSSTYHKHIRITDSKTLEVVKQAVGGLHYDIFSRLSLRLPNSPVLNVVSSNAVLAQPLGVIDGVDYGLSGKIRRINIEGIQQQLAQDAIVVIGPIAPSVTGEMFNLPFEEIATQIAIKLKADKLIGFCDQQGILDSEGNVLSDLHPREAKRYLTQFIESGQYHHSAARFLQASIEVCHAGIKRSHLLSYKEDGSLLQELFSRDGIGT
type: DOMAIN
name: NAGS_kin
description: N-acetylglutamate synthase, kinase-like domain
Protein sequence:
MKSPKVGFVSLGCPKALVDSERILTQLRTEGYQVASDYDGADLVVVNTCGFIESAVQESLDAIGEAMSENGRVIVTGCLGKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPPRHNPFVDLVPEQGIRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAALKRAGVKEVLVISQDTSAYGVDTKYKLDFWNGQPVKTKFYDMCEALGQLGIWVRLHYVYPYPHVDAVIDLMAQGKILPYLDIPFQHASPRILKLMKRPAHSENTLDRIKVWREKCPNLVIRSTFVVGFPGETEEDFQILLEWLKEAQLDRVGCFTYSPVEGATANDLPDHVSEEVKQERYERFMQVQQEISAARLQKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDGNVFVEDIDKSLVQPGQLLEVEITDADEYDLFAKLIQIKTA

Annotated regions:
phrase: HYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAALKRAGVKEVLVISQDTSAYGVDTKYKLDFWNGQPVKTKFYDMCEALGQLGIWVRLHYVYPYPHVDAVIDLMAQGKILPYLDIPFQHASPRILKLMKRPAHSENTLDRIKVWREKCPNLVIRSTFVVGFPGETEEDFQILLEWLKEAQLDRVGCFTYSPVEGATANDLPDHVSEEVKQERYERFM
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: QKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDGNVFVEDIDKSLVQPGQLLEVEITDADEYDLFAKLI
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: LKISEGCNHRCTFCIIPSMR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: IGQTMTVLVDSLEDEYPVAVARSYADAPEIDGNVFVEDIDKSLVQPGQLLEVEITDADEYDLFAKL
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: KISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAALKRAGVKEVLVISQDTSAYGVDTKYKLDFWNGQPVKTKFYDMCEALGQLGIWVRLHYVYPYPHVDAVIDLMAQGKILPYLDIPFQHASPRILKLMKRPAHSENTLDRIKVWREKCPNLVIRSTFVVGFPGETEEDFQILLEW
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: PKVGFVSLGCPKALVDSERILTQLRTEGYQVASDYDGADLVVVNTCGFIESAVQESLDAIGEAMSENGRVIVTGCLGKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYV
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: KVGFVSLGCPKALVDSERILTQLRTEGYQVASDYDGADLVVVNTCGFIESAVQESLDAIGEAMSENGRVIVTGCLGKDEDKIRQMHPN
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: LTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAALKRAGVKEVLVISQDTSAYGVDTKYKLDFWNGQPVKTKFYDMCEALGQLGIWVRLHYVYPYPHVDAVIDLMAQGKILPYLDIPFQHASPRILKLMKRPAHSENTLDRIKVWREKCPNLVIRSTFVVGFPGETEEDFQILLEWLKEAQLDRVGCFTYSPVEGATANDLPDHVSEEVKQERYERFMQVQQEISA
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MKETLSGVVTRVTGASYIVETGDGLKVRCRTVPGTVSENEGSNLVAVGDRVEFRPKASETDMAEGVITRVEERRTALVRRREVRRNRSKEKEQVIVANIDQLVLITSFDDPPFNSRLVDRYLVFAESEKLPLLIVVNKIDLDEEGMVEEDLEVYRQLDCNICLVSAEDGRGIEELRELLRDRVSAFSGHSGVGKSTLINLLVGCEELRTAETSGKTGKGVHTTTSSAMFQLPGGGYVIDTPGIREFNLAGITRENLRFYYTEFLRYMPECTFSSCSHTVEPGCAVIAAVESGSIARERYESYLALLDSLAE

Annotated regions:
phrase: ANIDQLVLITSFDDPPFNSRLVDRYLVFAESEKLPLLIVVNKIDLDEEGMVEEDLEVYRQLDCNICLVSAEDGRGIEELRELLRDRVSAFSGHSGVGKSTLINLLVGCEELRTAETSGKTGKGVHTTTSSAMFQLPGGGYVIDTPGI
type: DOMAIN
name: RsgA_GTPase_dom
description: RsgA GTPase domain

phrase: SKEKEQVIVANIDQLVLITSFDDPPFNSRLVDRYLVFAESEKLPLLIVVNKIDLDEEGMVEEDLEVYRQLDCNICLVSAEDGRGIEELRELLRDRVSAFSGHSGVGKSTLINLLVGCEELRTAETSGKTGKGVHTTTSSAMFQLPGGGYVIDTPGIRE
type: DOMAIN
name: G_CP_dom
description: Circularly permuted (CP)-type guanine nucleotide-binding (G) domain

phrase: ERRTALVRRREVRRNRSKEKEQVIVANIDQLVLITSFDDPPFNSRLVDRYLVFAESEKLPLLIVVNKIDLDEEGMVEEDLEVYRQLDCNICLVSAEDGRGIEELRELLRDRVSAFSGHSGVGKSTLINLLVGCEELRTAETSGKTGKGVHTTTSSAMFQLPGGGYVIDTPGIREFN
type: DOMAIN
name: RsgA_GTPase_dom
description: RsgA GTPase domain
Protein sequence:
MAKSRTAADGGMETSYGFRDVAEGEKQALVNDVFHKVAKRYDVMNDVMSMGLHRAWKDAMISALHPRKDPSYKVLDVAGGTGDIAFRIVEASGKLAHATVLDINGSMLAVGADRAEKKKISENLTFVEANAEDLPFEDNSFDAYTIAFGIRNVPRIDVALKEAHRVLKRGGRLLVLEFSEVDLPLLDKVYDAWSFNAIPRFGKAITGEAEPYQYLVESIRKFPNQQDFATMIRQAGFGRVTFTNYTGGIAALHSGWKL

Annotated regions:
phrase: YDVMNDVMSMGLHRA
type: CONSERVED_SITE
name: UbiE/COQ5_MeTrFase_CS
description: UbiE/COQ5 methyltransferase, conserved site

phrase: RVLKRGGRLLVLEF
type: CONSERVED_SITE
name: UbiE/COQ5_MeTrFase_CS
description: UbiE/COQ5 methyltransferase, conserved site
Protein sequence:
MTKKILILSGGISKERLISLDTGKQVAKELIKNGYKVLISEPDKNLSKNITSFKPDVIFNALHGQFGEDGYIQAILETKKIPYTHSGVIASSIAMDKEISKKIFIKNKILTPKYIKFNHKKNKLNIIKLIEKNLKFPVVVKPINEGSSVHVYICDKTNILKNLKVLKSYNEILIEEFIPGREIQVAIMNNKSLGAIELEPRRKFYDYEAKYNSSAKTKHLIPVDLSKNNLAKITGIARAAHKIIGCKGVTRSDFKFFNGKFYLLEINTQPGMTKLSLVPEIAKHKGISFIKLIEWILKDASINR

Annotated regions:
phrase: KKIFIKNKILTPKYIKFNHKKNKLNIIKLIEKNLKFPVVVKPINEGSSVHVYICDKTNILKNLKVLKSYNEILIEEFIPGREIQVAIMNNKSLGAIELEPRRKFYDYEAKYNSSAKTKHLIPVDLSKNNLAKITGIARAAHKIIGCKGVTRSDFKFFNGKFYLLEINTQPGMTKLSLVPEIAKHKGISFIKLIEWIL
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold

phrase: HGQFGEDGYIQ
type: CONSERVED_SITE
name: D-Ala_lig_Van_CS
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site

phrase: TPKYIKFNHKKNKLNIIKLIEKNLKFPVVVKPINEGSSVHVYICDKTNILKNLKVLKSYNEILIEEFIPGREIQVAIMNNKSLGAIELEPRRKFYDYEAKYNSSAKTKHLIPVDLSKNNLAKITGIARAAHKIIGCKGVTRSDFKFFNGKFYLLEINTQPGMTKLSLVPEIAKHKGISFIKLIEWI
type: DOMAIN
name: Dala_Dala_lig_C
description: D-alanine--D-alanine ligase, C-terminal

phrase: ITSFKPDVIFNALHGQFGEDGYIQAILETKKIPY
type: DOMAIN
name: Dala_Dala_lig_N
description: D-alanine--D-alanine ligase, N-terminal domain