Protein sequence:
MGARNSVLRGKKADELEKIRLRPGGKKKYKLKHIVWAANELDRFGLAESLLESKEGCQKILTVLDPLVPTGSENLKSLFNTVCVIWCIHAEEKVKDTEGAKQIVQRHLVAETGTAEKMPNTSRPTAPPSGKNFPVQQVAGNYTHIPLSPGTLNAWVKLVEEKKFGAEVVPGFQALSEGCTPYDINQMLNCVGDHQAAMQIIREIINEEAADWDVAHPIPGPLPAGQLREPRGSDIAGTTSTVEEQIQWMFRPQNPVPVGNIYRRWIQIGLQKCVRMYNPTNILDINQGPKEPFQSYVDRFYKSLRAEQTDPAVKNWMTQTLLIQNANPDCKLVLKGLGMNPTLEEMLTTCQGVGGPGQKARLMAEALKEVMAPAPIPFAAAQQRKTFKCWNCGKEGHSARQWSAPRRQGCWKCGKSGHVMANCPDRQAGFLRDWPLGKEGPQLPRGPSPAGANTNSTPIGSSSGPTGEIYAARKKAKGAERETVQGSDRGLTAFRAGRDTMQGDDRGLAAPQFSLWKRPVVTAHIEGQPVEVLLDTRANDSIVAGIELGSNYSPKIVGGIGGFINTKEYKNVEIEVLGKRVKATIMTGDTPINIFGRNVLTALGMSLNLPVAKIEPIKIMLKPGKDGPRLKQWPLTKEKIEALKEICEKMEKEGQLEEAPPTNPYNTPTFAIKKKDKNKWRMLIDFRELNKVTQDFTEIQLGIPHPAGLAKKRRITVLDVGDAYFSIPLHEDFRQYTAFTLPSVNNAEPGKRYIYKVLPQGWKGSPAIFQYTMRQILEPFRKANEDVIIIQYMDDILIASDRTDLEHDKVVLQLKELLNGLGFSTPDEKFQKDPPYRWMGYELWPTKWKLQKIQLPQKEVWTVNDIQKLVGVLNWAAQIYPGIKTKHLCRLIRGKMTLTEEVQWTELAEAELEENRIILSQKQEGHYYQEEKKLEATVQKDQDNQWTYKVHQGEKILKGGKICKDKKYPYQRVRLLAQVVQKIGKEALVIWGRIPKFHLPVERDTWEQWWDNYWQVTWIPDWDFVSTPPLVRLAFNLVGEPVPGAETFYTDGSCNRQSKEGKAGYITDRGRDRVKVLEQTTNQQAELEAFAMALTDSGPKANIIVDSQYVMGIVAGQPTESENRIVNQIIEEMIKKEAIYVAWVPAHKGIGGNQEVDHLVSQGIRQVLFLEKIEPAQEEHEKYHSNIKELSHKFGIPKLVARQIVNTCAHVQQKGEAIHGQVNAELGTWQMDCTHLEGKVIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWVGIEQTFGVPYNPQSQGVVEAMNHHLKNQIDRIREQANTVETIVLMAVHCMNFKRRGGIGDMTPAERIINMITTEQEIQFLQAKNSKLKNFRVYFREGRDQLWKGPGELLWKGDGAVIVKVGTEIKVVPRRKAKIIKDYGGRQEMDSGSHLEGAREDGEMA

Annotated regions:
phrase: VTAHIEGQPVEVLLDTRANDSIVAGIELGSNYSPKIVGGIGGFINTKEYKNVEIEVLGKRVKATIMTGDTPINIFGRNVL
type: DOMAIN
name: Retropepsin-like_cat_dom
description: Retropepsin-like catalytic domain

phrase: AELGTWQMDCTHLEGKVIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWVGIEQTFGVPYN
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: FRVYFREGRDQLWKGPGELLWKGDGAVIVKVGTEIKVVPRRKAKIIK
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: CWKCGKSGHVMANCP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: AQEEHEKYHSNIKELSHKFGIPKLVARQIVNTCA
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: IKKKDKNKWRMLIDFRELNKVTQDFTEIQLGIPHPAGLAKKRRITVLDVGDAYFSIPLHEDFRQYTAFTLPSVNNAEPGKRYIYKVLPQGWKGSPAIFQYTMRQILEPFRKANEDVIIIQYMDDILIASDRTDLEHDKVVLQLKELLNGLGFSTPDEKFQKDPPYRWMGYE
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: KCWNCGKEGHSAR
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: EKIEPAQEEHEKYHSNIKELSHKFGIPKLVARQIVNTCAHV
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: GARNSVLRGKKADELEKIRLRPGGKKKYKLKHIVWAANELDRFGLAESLLESKEGCQKILTVLDPLVPTGSENLKSLFNTVCVIWCIHAEEKVKDTEGAKQIVQRHLVAETGTAEKMPNTSRPTAPPSGKNFPVQQVAGN
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: WKRPVVTAHIEGQPVEVLLDTRANDSIVAGIELGSNYSPKIVGGIGGFINTKEYKNVEIEVLGKRVKATIMTGDTPINIFGRNVLTALGMS
type: DOMAIN
name: Retropepsins
description: Retropepsins

phrase: VEVLLDTRANDSIVAGIELGSNYSPKIVGGIGGFINTKEYKNVEIEVLGKRVKATIMTGDTPINIFGRN
type: DOMAIN
name: Peptidase_A2_cat
description: Peptidase A2A, retrovirus, catalytic

phrase: KCWNCGKEGHSAR
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: GCWKCGKSGHVMANC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: QVNAELGTWQMDCTHLEGKVIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGANFTSQEVKMVAWWVGIEQTFGVPYNPQSQGVVEAMNHHLKNQIDRIREQANTVETIVLMAVHCMNFKRRGGIGDMTPAERIINM
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: EGQLEEAPPTNPYNTPTFAIKKKDKNKWRMLIDFRELNKVTQDFTEIQLGIPHPAGLAKKRRITVLDVGDAYFSIPLHEDFRQYTAFTLPSVNNAEPGKRYIYKVLPQGWKGSPAIFQYTMRQILEPFRKANEDVIIIQYMDDILIASDRTDLEHDKVVLQLKELLNGLGFSTPDEKFQKDPPYRWMGYE
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: YYQEEKKLEATVQKDQDNQWTYKVHQGEKILKGGKICKDKKYPYQRVRLLAQVVQKIGKEALVIWGRIPKFHLPVERDTWEQWWDNYWQVTWIPDWDFVS
type: DOMAIN
name: RVT_connect
description: Reverse transcriptase connection

phrase: LQKIQLPQKEVWTVNDIQKLVGVLNWAAQIYPGIKTKHLCRLIRGKMTLTEEVQWTELAEAEL
type: DOMAIN
name: RVT_thumb
description: Reverse transcriptase thumb

phrase: VYFREGRDQLWKGPGELLWKGDGAVIVKVGTEIKVVPRRKAKI
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: MYNPTNILDINQGPKEPFQSYVDRFYKSLRAEQTDPAVKNWMTQTLLIQNANPDCKLVLKGLGMNPTLEEML
type: DOMAIN
name: Gag_p24_C
description: Retroviral nucleocapsid Gag protein p24, C-terminal domain

phrase: VPGAETFYTDGSCNRQSKEGKAGYITDRGRDRVKVLEQTTNQQAELEAFAMALTDSGPKANIIVDSQYVMGIVAGQPTESENRIVNQIIEEMIKKEAIYVAWVPAHKGIGGNQEVDHLVSQGI
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: RNSVLRGKKADELEKI
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: RPGGKKKYKLKHIVWAAN
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: DRFGLAESLLESKEG
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: TGSENLKSLFNTVCVIWCI
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: HAEEKVKDTEGAK
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: GCWKCGKSGHVMANCP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: KCWNCGKEGHSARQWS
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: AETFYTDGSCNRQSKEGKAGYITDRGRDRVKVLEQTTNQQAELEAFAMALTDSGPKANIIVDSQYVMGIVAGQPTESENRIVNQIIEEMIKKEAIYVAWVPAHKGIGGNQEVDHLVSQG
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain