nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MIYTMKKVHALWVSICLMLNLAPAPLNADSEEDEEYTIITDTELPPLKLMHSFCAFKPDDGPCKAIMKRFFFNIFTRQCEEFIYGGCGGNQNRFESMEECKKVCTRDNVHRIIQTALQQEKPDFCFLEEDPGICRGYITRYFYNNQSKQCERFKYGGCLGNMNNFETLEECKNTCEDGLNGFQVDNYGTQLNAVNNSQTPQSTKVPSFFEFHGPSWCLAPADRGLCRANENRFYYNSVIGKCRPFKYSGCGGNENNFTSKRECLRACKKGFIQRISKGGLIKTKRKRKKQRVKIAYEEVFVKNM

Annotated regions:
phrase: FKYGGCLGNMNNFETLEE
type: CONSERVED_SITE
name: Prtase_inh_Kunz-CS
description: Proteinase inhibitor I2, Kunitz, conserved site

phrase: FIYGGCGGNQNRFESMEE
type: CONSERVED_SITE
name: Prtase_inh_Kunz-CS
description: Proteinase inhibitor I2, Kunitz, conserved site

phrase: FCFLEEDPGICRGYITRYFYNNQSKQCERFKYGGCLGNMNNFETLEECKNTC
type: DOMAIN
name: Kunitz_BPTI
description: Pancreatic trypsin inhibitor Kunitz domain

phrase: WCLAPADRGLCRANENRFYYNSVIGKCRPFKYSGCGGNENNFTSKRECLRAC
type: DOMAIN
name: Kunitz_BPTI
description: Pancreatic trypsin inhibitor Kunitz domain

phrase: FCAFKPDDGPCKAIMKRFFFNIFTRQCEEFIYGGCGGNQNRFESMEECKKV
type: DOMAIN
name: Kunitz_BPTI
description: Pancreatic trypsin inhibitor Kunitz domain

phrase: SFCAFKPDDGPCKAIMKRFFFNIFTRQCEEFIYGGCGGNQNRFESMEECKKVC
type: DOMAIN
name: Kunitz_BPTI
description: Pancreatic trypsin inhibitor Kunitz domain

phrase: SWCLAPADRGLCRANENRFYYNSVIGKCRPFKYSGCGGNENNFTSKRECLRAC
type: DOMAIN
name: Kunitz_BPTI
description: Pancreatic trypsin inhibitor Kunitz domain

phrase: DFCFLEEDPGICRGYITRYFYNNQSKQCERFKYGGCLGNMNNFETLEECKNTC
type: DOMAIN
name: Kunitz_BPTI
description: Pancreatic trypsin inhibitor Kunitz domain

phrase: HSFCAFKPDDGPCK
type: DOMAIN
name: Kunitz_BPTI
description: Pancreatic trypsin inhibitor Kunitz domain

phrase: CEEFIYGGCG
type: DOMAIN
name: Kunitz_BPTI
description: Pancreatic trypsin inhibitor Kunitz domain

phrase: GNQNRFESMEECKKV
type: DOMAIN
name: Kunitz_BPTI
description: Pancreatic trypsin inhibitor Kunitz domain

phrase: CAFKPDDGPCKAIMKRFFFNIFTRQCEEFIYGGCGGNQNRFESMEECKKV
type: DOMAIN
name: Kunitz_BPTI
description: Pancreatic trypsin inhibitor Kunitz domain

phrase: CFLEEDPGICRGYITRYFYNNQSKQCERFKYGGCLGNMNNFETLEECKNT
type: DOMAIN
name: Kunitz_BPTI
description: Pancreatic trypsin inhibitor Kunitz domain

phrase: FKYSGCGGNENNFTSKRE
type: CONSERVED_SITE
name: Prtase_inh_Kunz-CS
description: Proteinase inhibitor I2, Kunitz, conserved site

phrase: CLAPADRGLCRANENRFYYNSVIGKCRPFKYSGCGGNENNFTSKRECLRA
type: DOMAIN
name: Kunitz_BPTI
description: Pancreatic trypsin inhibitor Kunitz domain
Protein sequence:
MVKRNSEPKHWLILPAAGIGSRMGSTIPKQYLNIDGQTIIARTIEAMTAKPRFETVLVGLRSDDSYFNSLPVDVTNKCIRFVGGDERADTVLAGLMALSDKAADHDWVWVHDAARPLITEHELELLEKSLLDAPDGALLALPSVDTIKCSKNGRVDSTLDRNIIWRAQTPQAFPYALLRDALRSALKKEVQITDESSAMEFAGHSPLLVEGRSSNIKVTKPEDLAALESTNTVNEKTNMTPDLRVGTGYDVHAFENGEFVTLGGVRIPHSFGLKAHSDGDVLLHAICDAMLGALALGDIGKHFPDTDDEWSGADSRFLLRAVNDLIQSKGFSVNNLDSTIIAQAPKMLPHIDNMRQCIAEDLGIDVDRVSVKATTTEKLGFTGRKEGIACDASVMLMRQVSV

Annotated regions:
phrase: RVGTGYDVHAFENGEFVTLGGVRIPHSFGLKAHSDGDVLLHAICDAMLGALALGDIGKHFPDTDDEWSGADSRFLLRAVNDLIQSKGFSVNNLDSTIIAQAPKMLPHIDNMRQCIAEDLGIDVDRVSVKATTTEKLGFTGRKEGIACDASVM
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: TKPEDLAALESTNTVNEKTNMTPDLRVGTGYDVHAFENGEFVTLGGVRIPHSFGLKAHSDGDVLLHAICDAMLGALALGDIGKHFPDTDDEWSGADSRFLLRAVNDLIQSKGFSVNNLDSTIIAQAPKMLPHIDNMRQCIAEDLGIDVDRVSVKATTTEKLGFTGRKEGIACDASVMLMR
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: SDGDVLLHAICDAML
type: CONSERVED_SITE
name: MECDP_synthase_CS
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site

phrase: LRVGTGYDVHAFENGEFVTLGGVRIPHSFGLKAHSDGDVLLHAICDAMLGALALGDIGKHFPDTDDEWSGADSRFLLRAVNDLIQSKGFSVNNLDSTIIAQAPKMLPHIDNMRQCIAEDLGIDVDRVSVKATTTEKLGFTGRKEGIACDASVMLM
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RVGTGYDVHAFENGEFVTLGGVRIPHSFGLKAHSDGDVLLHAICDAMLGALALGDIGKHFPDTDDEWSGADSRFLLRAVNDLIQSKGFSVNNLDSTIIAQAPKMLPHIDNMRQCIAEDLGIDVDRVSVKATTTEKLGFTGRKEGIACDASVMLM
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: LRVGTGYDVHAFENGEFVTLGGVRIPHSFGLKAHSDGDVLLHAICDAMLGALALGDIGKHFPDTDDEWSGADSRFLLRAVNDLIQSKGFSVNNLDSTIIAQAPKMLPHIDNMRQCIAEDLGIDVDRVSVKATTTEKLGFTGRKEGIACDASVM
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Protein sequence:
MARYIGPKAKLSRREGTDLFLKSARRSLDSKCKLDSKPGQHGRTSGARTSDYGNQLREKQKVKRMYGILERQFRRYFAEADRRKGNTGETLLKLLETRLDNVVYRMGFGSTRAEGRQLVSHKAFTVNGIVVNIASYQVKPGDIVAVREKSKKQVRIVEALSLAEQIGMPSWVAVDSKKMEGTFKSVPDRSEIAADVNESLIVELYSR

Annotated regions:
phrase: RYIGPKAKLSRREGTDLFLKSARRSLDSKCKLDSKPGQHGRTSGARTSDYGNQLREKQKVKRMYGILERQFRRYFAEADRRKGNTGETLLKLL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: RYIGPKAKLSRREGTDLFLKSARRSLDSKCKLDSKPGQHGRTSGARTSDYGNQLREKQKVKRMYGILERQFRRYFAEADRRKGNTGETLLKLL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: TRLDNVVYRMGFGSTRAEGRQLVSHKAFTVNGIVVNIASYQVKPGDIVAVREKSKKQVRIVEAL
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: RLDNVVYRMGFGSTRAEGRQLVSHKAFTVNGIVVNIASYQVKPGDI
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain
Protein sequence:
MSIMEVEVVSSEQKIYSGEATFIVVPTVQGELGIYPRHEPIMSLVRPGALRLTVPGEDKEVLVAVSGGVLEVQPDKVTVLADVAVRSAEMDQARAEEAKKAAEAGISQAKDDKALAEAHKALAAAIAQLKTLDYIRSHKK

Annotated regions:
phrase: EMDQARAEEAKKAAEAGISQAKDDKALAEAHKALAAAIAQLK
type: DOMAIN
name: ATP_synth_F1_esu_C
description: ATP synthase epsilon subunit, C-terminal domain

phrase: MEVEVVSSEQKIYSGEATFIVVPTVQGELGIYPRHEPIMSLVRPGALRLTVPGEDKEVLVAVSGGVLEVQPDKVTVLADV
type: DOMAIN
name: ATP_synth_F1_dsu/esu_N
description: ATP synthase, F1 complex, delta/epsilon subunit, N-terminal
Protein sequence:
MRKIKLIIFPGYYIPHIGGLETHVDEFTKHLSEDENYDIYIFAPNIPKYKEFEIRHNNVKVYRYPAFEIIPNYPVPNIFNIKFWRMFFNLYKIDFDIVMTRTRFFSNTLLGFIFAKLRFKKKKLIHVEHGSAFVKLESEFKNKLSYFYDKTIGKLIFKKADYVVAISKAVKNFILENFVNDKDIPIIYRGLEIEKIESIGEDKKIKEKFKNKIKLCFVGRLYKWKGVENIIKAYVDLPKDLKEKIILIVVGYGEDLERLKKLAGNYLNNGIYFTGKVDFEKAIAIVKASDIYIHSSYKGGGLSSSLLQAMCCGKAIVASPYEGADEVVIDGYNGILLKDNSPEEIKRGIIKLIENNNLRKIYGENAKNFIKENFNWKKSVKEYKKIFERLVN

Annotated regions:
phrase: IGGLETHVDEFTKHLSEDENYDIYIFAPNIPKYKEFEIRHNNVKVYRYPAFEIIPNYPVPNIFNIKFWRMFFNLYKIDFDIVMTRTRFFSNTLLGFIFAKLRFKKKKLIHVEHGSAFVKLESEFKNKLSYFYDKTIGKLIFKKADYVVAISKAVKNFILENFVNDKDIPIIYRGLEI
type: DOMAIN
name: Glyco_trans_4-like_N
description: Glycosyltransferase subfamily 4-like, N-terminal domain

phrase: EDKKIKEKFKNKIKLCFVGRLYKWKGVENIIKAYVDLPKDLKEKIILIVVGYGEDLERLKKLAGNYLNNGIYFTGKVDFEKAIAIVKASDIYIHSSYKGGGLSSSLLQAMCCGKAIVASPYEGADEVVIDGYNGILLKDNSPEEIKRGIIKLIENNNLRKIYGENAK
type: DOMAIN
name: Glyco_trans_1
description: Glycosyl transferase, family 1
Protein sequence:
MFRGANAVSLDAKGRISMPARYREELMARSAGQLIVTIDAMDPCLCIYPLPEWELIETKLRELPSLREETRRLQRLLIGNAVDLELDGSGRFLIPPRLREHASLDKHAMLVGQLNKFQLWNEDAWIAIANADLAAIKQQPGDLPGELRDLIL

Annotated regions:
phrase: AVDLELDGSGRFLIPPRLREHASLDKHAMLVGQLNKFQLWNED
type: DOMAIN
name: SpoVT-AbrB_dom
description: SpoVT-AbrB domain

phrase: ANAVSLDAKGRISMPARYREELMARSAGQLIVTIDAMDPCLCIYPLP
type: DOMAIN
name: SpoVT-AbrB_dom
description: SpoVT-AbrB domain

phrase: MFRGANAVSLDAKGRISMPARYREELMARSAGQLIVTIDAMDPCLCIYPLPEWELIETKLRELPSLREETRRLQ
type: DOMAIN
name: MraZ_dom
description: MraZ domain

phrase: IGNAVDLELDGSGRFLIPPRLREHASLDKHAMLVGQLNKFQLWNEDAWIAIAN
type: DOMAIN
name: MraZ_dom
description: MraZ domain

phrase: RRLQRLLIGNAVDLELDGSGRFLIPPRLREHASLDKHAMLVGQLNKFQLWNEDA
type: DOMAIN
name: MraZ_C
description: MraZ, C-terminal

phrase: RGANAVSLDAKGRISMPARYREELMARSAGQLIVTIDAMDPCLCIYPLPEWELIETKLREL
type: DOMAIN
name: MraZ_N
description: MraZ, N-terminal
Protein sequence:
MSEKLQKVLARAGHGSRREIESIIEAGRVSVDGKIAKLGDRVEVTPGLKIRIDGHLISVRESAEQICRVLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGARWIAVGRLDVNTCGLLLFTTDGELANRLMHPSREVEREYAVRVFGQVDDAKLRDLSRGVQLEDGPAAFKTIKFSGGEGINQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDIPLPKGLPRGGWTELDLAQTNYLRELVELPPETSSKVAVEKDRRRMKANQIRRAVKRHSQVSGGRRSGGRNNG

Annotated regions:
phrase: KLQKVLARAGHGSRREIESIIEAGRVSVDGKIAKLGDRVE
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: EKLQKVLARAGHGSRREIESIIEAGRVSVDGKIAKLGDRVEVTPGLKIRIDGHLISVRESAEQICRVLAYY
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: GRLDVNTCGLLLFT
type: CONSERVED_SITE
name: PsdUridine_synth_RsuA/RluB_CS
description: Pseudouridine synthase, RsuA/RluB/E/F, conserved site

phrase: VLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGARWIAVGRLDVNTCGLLLFTTDGELANRLMHPSREVEREYAVRVFGQVDDAKLRDLSRGVQLEDGPAAFKTIKFSGGEGINQWYNVTLTEGRNREVRRL
type: DOMAIN
name: PsdUridine_synth_RsuA/RluA
description: Pseudouridine synthase, RsuA/RluA-like
Protein sequence:
MSIEQGYKTPLLGLNKTEIEDIVKSKGLEKYRASQIFSWLYKTPVMDIDLMTNIPIKEREFLKKDYCLTTITLEKTSDSKSSSSKKYLFKTRDNNFIESVKISNHYAAPTICISSQIGCAIKCKFCATGGIKFVRNLTAEEIISQLIYLIQLEREMIGNVVFMGMGEPLLNYKNVIKSIKLMNDPQGLKIGARRITISTCGIPKFIRNLSNEELGINLAVSLNATDDKTRSFLMPINRVYPIRELLSAVDYYTKKTNRRVSFEYVLIRGINDSIKDAKKLVEILNGRLCHVNLILLNKISNSKFYPTSIERAKLFVEILAHGGVNATIRKSKGTDISAACGQLAAKKF

Annotated regions:
phrase: LLGLNKTEIEDIVKSKGLEKYRASQIFSWLYKTPVMDIDLMTNIPIKEREFLKK
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: PTICISSQIGCAIKCKFCATGGIKFVRNLTAEEIISQLIYLIQLEREMIGNVVFMGMGEPLLNYKNVIKSIKLMNDPQGLKIGARRITISTCGIPKFIRNLSNEELGINLAVSLNATDDKTRSFLMPINRVYPIRELLSAVDYYTKKTNRRVSFEYVLIRGINDSIKDAKKLVEILNGRLCHVNLILLNKISNSKFYPTSIERAKLFV
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: SSQIGCAIKCKFCATGGIKFVRNLTAEEIISQLIYLIQLEREMIGNVVFMGMGEPLLNYKNVIKSIKLMNDPQGLKIGARRITISTCGIPKFIRNLSNEELGINLAVSLNATDDKTRSFLMPINRVYPIRELLSAVDYYTKKTNRRVSFEYVLIRGINDSIKDA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: HYAAPTICISSQIGCAIKCKFCATGGIKFVRNLTAEEIISQLIYLIQLEREMIGNVVFMGMGEPLLNYKNVIKSIKLMNDPQGLKIGARRITISTCGIPKFIRNLSNEELGINLAVSLNATDDKTRSFLMPINRVYPIRELLSAVDYYTKKTNRRVSFEYVLIRGINDSIKDAKKLVEILNGRLCHVNLILLNKISNSKFYPTSIERAKLFVEILAHGGVNATIRKSKGT
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: YKTPLLGLNKTEIEDIVKSKGLEKYRASQIFSWLYKTPVMDIDLMTNIPIKEREFLKKDYCLTTITLEKTSDSKSSSSKKYLFKTRDNNFIESVKISNHYAAPTICISSQIGCAIKCKFCATGGIKFVRNLTAEEIISQLIYLIQLEREMIGNVVFMGMGEPLLNYKNVIKSIKLMNDPQGLKIGARRITISTCGIPKFIRNLSNEELGINLAVSLNATDDKTRSFLMPINRVYPIRELLSAVDYYTKKTNRRVSFEYVLIRGINDSIKDAKKLVEILNGRLCHVNLILLNKISNSKFYPTSIERAKLFVEILAHGGVNATIRKSKGTDISAACGQLAAK
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MQYEDKNGVNEPSRRRLLKGIGALALAGSCPVAHAQKTQSAPGTLSPVARNEKQPFYGEHQAGILTPQQAAMMLVAFDVLASDKADLERLFRLLTQRFAFLTQGGAAPETPNPRLPPLDSGILGGYIAPDNLTITLSVGHSLFDERFGLAPQMPKKLQKMTRFPNDSLDAALCHGDVLLQICANTQDTVIHALRDIIKHTPDLLSVRWKREGFISDHAARSKGKETPINLLGFKDGTANPDSQNDKLMQKVVWVTADQQEPAWTIGGSYQAVRLIQFRVEFWDRTPLKEQQTIFGRDKQTGAPLGMQHEHDVPDYASDPEGKGIALDSHIRLANPRTAESESSLMLRRGYSYSLGVTNSGQLDMGLLFVCYQHDLEKGFLTVQKRLNGEALEEYVKPIGGGYFFALPGVKDANDYLGSALLRV

Annotated regions:
phrase: QAGILTPQQAAMMLVAFDVLASDKADLERLFRLLTQRFAFLTQGGAAPETPNPRLPPLDSGILGGYIAPDNLTITLSVGHSLFDERFGLAPQMPKKLQKMTRFPNDSLDAALCHGDVLLQICANTQDTVIHALRDIIKHTPDLLSVRWKREG
type: DOMAIN
name: Dyp_perox_N
description: Dyp-type peroxidase, N-terminal domain

phrase: TPINLLGFKDGTANPDSQNDKLMQKVVWVTADQQEPAWTIGGSYQAVRLIQFRVEFWDRTPLKEQQTIFGRDKQTGAPLGMQHEHDVPDYASDPEGKGIALDSHIRLANPRTAESESSLMLRRGYSYSLGVTNSGQLDMGLLFVCYQHDLEKGFLTVQKRLNGEALEEYVKPIGGGYFFALPGV
type: DOMAIN
name: Dyp_perox_C
description: Dyp-type peroxidase, C-terminal domain

phrase: MQYEDKNGVNEPSRRRLLKGIGALALAGSCPVAH
type: CONSERVED_SITE
name: TAT_signal
description: Twin-arginine translocation pathway, signal sequence
Protein sequence:
MSSYFVNPLFSKYKAGESLEPAYYDCRFPQSVGRSHALVYGPGGSAPGFQHASHHVQDFFHHGTSGISNSGYQQNPCSLSCHGDASKFYGYEALPRQSLYGAQQEASVVQYPDCKSSANTNSSEGQGHLNQNSSPSLMFPWMRPHAPGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKLPGARDEEKVEEEGNEEEEKEEEEKEENKD

Annotated regions:
phrase: MFPWM
type: CONSERVED_SITE
name: Homeobox_Antennapedia_CS
description: Homeobox protein, antennapedia type, conserved site

phrase: RSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK
type: DOMAIN
name: HD
description: Homeodomain

phrase: RSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE
type: DOMAIN
name: HD
description: Homeodomain

phrase: PGRRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK
type: DOMAIN
name: HD
description: Homeodomain

phrase: NPYLTRKRRIE
type: DOMAIN
name: HD_metazoa
description: Homeodomain, metazoa

phrase: LGLTERQVKI
type: DOMAIN
name: HD_metazoa
description: Homeodomain, metazoa

phrase: WFQNRRMKW
type: DOMAIN
name: HD_metazoa
description: Homeodomain, metazoa

phrase: RRSGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNK
type: DOMAIN
name: HD
description: Homeodomain

phrase: VSHALGLTERQVKIWFQNRRMKW
type: CONSERVED_SITE
name: Homeobox_CS
description: Homeobox, conserved site

phrase: RRIEVSHAL
type: CONSERVED_SITE
name: HTH_motif
description: Helix-turn-helix motif

phrase: GLTERQVKIWFQNRRM
type: CONSERVED_SITE
name: HTH_motif
description: Helix-turn-helix motif
Protein sequence:
MRAVAKYVRISPRKARLVADQIRGKSYPEAASILRFTNKRAARILGDVLKSAAANAENNHDADPELLFVEEVRVDEGPTIKRYRPRALGRATMIRKRTSHITLRLGAPEGVPVGGAVDTPGDEEEEE

Annotated regions:
phrase: KRYRPRALGRATMIRKRTSHITLR
type: CONSERVED_SITE
name: Ribosomal_uL22_CS
description: Large ribosomal subunit protein uL22, conserved site
Protein sequence:
MSERLVTSNEIGIDSTNEYSLRPEKINEYIGQDKVKERLNIFIKAAQRRGEALDHVILYGPPGLGKTTLANIIANEMGGNLKITSGPAIERAGDLAAILTTLNTNDVLFIDEIHRLNRSVEEILYPAMEDYVLDIIIGKGAASKSIRLDLPKFTLIGATTRIGMLSSPLRDRFGVLCSMEYYTDEQLKEIIIRSAEILGCHITEEGAFEIAKRSRGTPRIANRLLKRVRDFAEVLYDNEITEEAAKKSLEILEVDGEGFDRIDNKILEAIIDNFNGGPVGIETLAYFVGEELDTIEDVYEPYLLQKGFIVRTPRGRMATDKAYKHLGRVRFNESKIDSKQCTLFEK

Annotated regions:
phrase: EGFDRIDNKILEAIIDNFNGGPVGIETLAYFVGEELDTIEDVYEPYLLQKGFIVRTPRGRMATDKAYKH
type: DOMAIN
name: RuvB_C
description: RuvB C-terminal winged helix domain

phrase: LRPEKINEYIGQDKVKERLNIFIKAAQRRGEALDHVILYGPPGLGKTTLANIIANEMGGNLKITSGPAIERAGDLAAILTTLNTNDVLFIDEIHRLNRSVEEILYPAMEDYVLDIIIGKGAASKSIRLDLPKFTLIGATTRIGMLSSPLRDRFGVLC
type: DOMAIN
name: RuvB-like_N
description: RuvB-like P-loop domain

phrase: YTDEQLKEIIIRSAEILGCHITEEGAFEIAKRSRGTPRIANRLLKRVRDFAEVLYDNEITEEAAKKSLEILEV
type: DOMAIN
name: AAA_lid_4
description: RuvB, AAA lid domain

phrase: ALDHVILYGPPGLGKTTLANIIANEMGGNLKITSGPAIERAGDLAAILTTLNTNDVLFIDEIHRLNRSVEEILYPAMEDYVLDIIIGKGAASKSIRLDLPKFTLIGATTRIGMLSSPLRDRFGVLCSMEYYTD
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain
Protein sequence:
MIKLLFMGTPQFSATVLKGLLDNPAYEILGVVTQPDRAVGRKKDIKVTPVKQLALEHGISIYQPEKLSGSQELIEIMGLGADGIITAAFGQFLPTILLDSVSFAINVHASLLPKYRGGAPIHYAIMNGDKEAGVTIMEMIKEMDAGDMVAKASTPILETDNVGTLFEKLAIIGRDLLLDSLPAYLSGELKPIPQDHSQATFSPNISPEQEKLDWTMFNQEVFNHIRGMNPWPVAHTFLEGQRLKIYEAQLAEGEGLPGQVIVKTKKSLVIATGQGALSLIVVQPAGKPKMSIIDFLNGIGRKLEVGDIIGR

Annotated regions:
phrase: NISPEQEKLDWTMFNQEVFNHIRGMNPWPVAHTFLEGQRLKIYEAQLAEGEGLPGQVIVKTKKSLVIATGQGALSLIVVQPAGKPKMSIIDFLNG
type: DOMAIN
name: Formyl_trans_C
description: Formyl transferase, C-terminal

phrase: EQEKLDWTMFNQEVFNHIRGMNPWPVAHTFLEGQRLKIYEAQLAEGEGLPGQVIVKTKKSLVIATGQGALSLIVVQPAGKPKMS
type: DOMAIN
name: Met-tRNA-FMT_C
description: Methionyl-tRNA formyltransferase, C-terminal domain

phrase: LLFMGTPQFSATVLKGLLDNPAYEILGVVTQPDRAVGRKKDIKVTPVKQLALEHGISIYQPEKLSGSQELIEIMGLGADGIITAAFGQFLPTILLDSVSFAINVHASLLPKYRGGAPIHYAIMNGDKEAGVTIMEMIKEMDAGDMVAKASTPILETDNVGTLFEKLAIIGRDL
type: DOMAIN
name: Formyl_transf_N
description: Formyl transferase, N-terminal

phrase: KLLFMGTPQFSATVLKGLLDNPAYEILGVVTQPDRAVGRKKDIKVTPVKQLALEHGISIYQPEKLSGSQELIEIMGLGADGIITAAFGQFLPTILLDSVSFAINVHASLLPKYRGGAPIHYAIMNGDKEAGVTIMEMIKEMDAGDMVAKASTPILETDNVGTLFEKLAIIGRDLLLDSLPAYLSGELKPIPQDHSQATFSPN
type: DOMAIN
name: Met-tRNA-FMT_N
description: Methionyl-tRNA formyltransferase, N-terminal domain

phrase: GVTIMEMIKEMDAGDMVAKASTP
type: ACTIVE_SITE
name: GART_AS
description: Phosphoribosylglycinamide formyltransferase, active site
Protein sequence:
MTTITPEAARLRLAQYLSPAFPTGGFAWSQGLEWAMDQGAVTRATLPQWLEDWLDHGAGWCDAVLLSLALRRGADHAELDDLARAMCPCARRLAETVEQGTAFAANVAALTGRPQSAAALPVAVGRACGCLPLPAGEIIGLYLQAQAAALISAAVRFLPLGPVEGQAMLAGLQPALLAAAARAGTADPKDLASATWGADLAAMRHETMVTRIFRS

Annotated regions:
Protein sequence:
MAKIVVGLSGGVDSAVSAYLLKKAGHNVIAVFMRNWDSSLNNDFLGKKNEKNFTICPQEQDWLDAKVVAKQLNIPIFRIDFIKEYWDEVFSDLILKYQSGLTPNPDILCNKNIKFKHFLDYAQKVHNADFIAMGHYAKTDNGNLYAGADSLKDQSYFLGQLSKSQLQKTIFPLGNLLKSEVRKIANELGLINAKKKDSTGICFIGERKFTDFLQNYIPAQPGNIIDISTKKVLGKHIGIMYFTIGQRKGFGLSGMKEPYFVVGHNLKEKILYVSPQSEKKWLESDSLMAKNANFLSENFRNLDNLSAKFRYRQEAIPIRIEKIQDNSFWISYQKYQAITPGQQVVIYHQNQVILAGEIALLFRNGKKLDYLD

Annotated regions:
phrase: SDSLMAKNANFLSENFRNLDNLSAKFRYRQEAIPIRIEKIQDNSFWISYQKYQAITPGQQVVIYHQNQVI
type: DOMAIN
name: MnmA-like_C
description: tRNA-specific 2-thiouridylase MnmA-like, C-terminal domain

phrase: DFLQNYIPAQPGNIIDISTKKVLGKHIGIMYFTIGQRKGFGLSGMKEPYFVVGHNLKEKILYV
type: DOMAIN
name: MnmA-like_central
description: tRNA-specific 2-thiouridylase MnmA-like, central domain
Protein sequence:
MEEGLEASNLPPEAWPSEVTVSVTGEPPNTSVEEKEETAKEAVIETSPEIMKPLSILDVLRISAVLEDTTDQLSILNYIMPVQYEKRQSISMKDNKEMHLEGRSSEKVPLASNPSKISSPLVHKEEPKLPEIRQGGQFNKVQDLIFKKPTRQTIMNTETLKKIQIDRQFLSDVITETLEELQEEGTFTNLLKALGKERESKMHFYDTIAREENGRKKIKSLQKQLLNVKKERQAEVQNRNEYIAHLKDQLQEMKAKTNMENRYMKRNTELQISQTQKKCSKTEELLLEEIEKLRLKTEEENRIHAEIELFLRKEQQKLEEKLEFWMEKFDKDTEMKQNELNALKSAKASDLAHLQELAKTIREYEQVIIEDRIEKEKTRKKREQDDLEMRSIIKLQAWWRGTVVRREIGGFKMPKDKDDSKDVKGKGKEKDKRRGKK

Annotated regions:
phrase: RSIIKLQAWWRGTVVRR
type: BINDING_SITE
name: IQ_motif_EF-hand-BS
description: IQ motif, EF-hand binding site
Protein sequence:
MSRIAILPSAVADQIAAGEVVERPASVVKELVENALDAGATSVDITIEDGGRTLIRIADNGSGMDGADAVLALSRHATSKITSAEQLVGVRSFGFRGEALPAIASVSELQIETASEDGSGTLVRVQAGTLTETGQVARRQGTTVSVHRLFHNTPARLKFMRSARSEWRAIVDAMQAIGVLRRDVHFTVRHDGRVALDWPAVSTLRARLAALWGAADVERFVDVDDVQGVVHVSGLAERPADVGTATRRVLLIVNGRVVRDHGLIRAAEAAYRSTIPAGMRPSLVLQVHVPGGDVDVNVHPAKAEVRFRDRWPLERAVEEAVRRALGLFDASAGIGWRTWSAAPASREPGHALGGIPLEPSALRAAPAPEGLFATPAAADANLAQHAIATATAPTADDLTSAMQVDAMRAEAAREMETLVVPPLMQLRKTYLMFEHDEGVVLIDQHSAHERVLYEQFLGVLERGEAPSQRLLFPLTLHLGPQEADAFEAHRDAFVRLGFEIDHFGGTSLLVQAVPMPHPRFDAERCLRDTLAALIGDRGASAAAKHERLAATFACKAAIKAGDQMSPGEMQALYRALAATVLPAHDVHGRSTIVRLSWDELDRRFGRK

Annotated regions:
phrase: PLMQLRKTYLMFEHDEGVVLIDQHSAHERVLYEQFLGVLERGEAPSQRLLFPLTLHLGPQEADAFEAHRDAFVRLGFEIDHFGGTSLLVQAVPMPHPRFDAERCLRDTLAALIGDRGASAAAKHERLAATFACKAAIKAGDQ
type: DOMAIN
name: MutL_C
description: MutL, C-terminal, dimerisation

phrase: AALWGAADVERFVDVDDVQGVVHVSGLAERPADVGTATRRVLLIVNGRVVRDHGLIRAAEAAYRSTIPAGMRPSLVLQVHVPGGDVDVNVHPAKAEVRFRDRWPLERAVEEAVRRA
type: DOMAIN
name: DNA_mismatch_S5_2-like
description: DNA mismatch repair protein, S5 domain 2-like

phrase: LMQLRKTYLMFEHDEGVVLIDQHSAHERVLYEQFLGVLERGEAPSQRLLFPLTLHLGPQEADAFEAHRDAFVRLGFEIDHFGGTSLLVQAVPMPHPRFDAERCLRDTLAALIGDRGASAAAKHERLAATFACKAAIKAGD
type: DOMAIN
name: MutL_C
description: MutL, C-terminal, dimerisation

phrase: GFRGEA
type: CONSERVED_SITE
name: DNA_mismatch_repair_CS
description: DNA mismatch repair, conserved site

phrase: LAALWGAADVERFVDVDDVQGVVHVSGLAERPADVGTATRRVLLIVNGRVVRDHGLIRAAEAAYRSTIPAGMRPSLVLQVHVPGGDVDVNVHPAKAEVRFRDRWPLERAVEEAVRRAL
type: DOMAIN
name: DNA_mismatch_S5_2-like
description: DNA mismatch repair protein, S5 domain 2-like
Protein sequence:
MMILKIGGSVITDKSAYRTARTYAIRSIVKVLSGIEDLVCVVHGGGSFGHIKAMEFGLPGPKNPRSSIGYSIVHRDMENLDLMVIDAMIEMGMRPISVPISALRYDGRFDYTPLIRYIDAGFVPVSYGDVYIKDEHSYGIYSGDDIMADMAELLKPDVAVFLTDVDGIYSKDPKRNPDAVLLRDIDTNITFDRVQNDVTGGIGKKFESMVKMKSSVKNGVYLINGNHPERIGDIGKESFIGTVIR

Annotated regions:
phrase: MILKIGGSVITDKSAYRTARTYAIRSIVKVLSGIEDLVCVVHGGGSFGHIKAMEFGLPGPKNPRSSIGYSIVHRDMENLDLMVIDAMIEMGMRPISVPISALRYDGRFDYTPLIRYIDAGFVPVSYGDVYIKDEHSYGIYSGDDIMADMAELLKPDVAVFLTDVDGIYSKDPKRNPDAVLLRDIDTNITFDRVQNDVTGGIGKKFESMVKMKS
type: DOMAIN
name: Asp/Glu/Uridylate_kinase
description: Aspartate/glutamate/uridylate kinase
Protein sequence:
MTRRYWNINLEEMMEAGVHFGHGTRKWNPRMAPYISAKRKGIHITNLTRTARFLSEACDLLFDAASRGKQFLIVGTKNKAADLVASAAIRARCHYVNKKWLGGMSTNWSTTETRLHKFRDLRAEQKTARLARLPKRDAAMLKRQLSHLQTYLGGIKYMTRLPDIVIIVDQQEEYTAIRECVTLGIPMICLIDTNCDPDLADISIPANDDAIASIRLILNKLVSAICEGRSSYIRNR

Annotated regions:
phrase: PDIVIIVDQQEEYTAIRECVTLGI
type: CONSERVED_SITE
name: Ribosomal_uS2_CS
description: Small ribosomal subunit protein uS2, conserved site

phrase: LEEMMEAGVHF
type: CONSERVED_SITE
name: Ribosomal_uS2_CS
description: Small ribosomal subunit protein uS2, conserved site
Protein sequence:
VHLTAEEKDAVLGLWGKVNVQEVGGEALGRLLVVYPWTQRFFESFGDLSSADAVMNNPKVKAHGKKVLDSFADGLKHLDNLKGTFAALSELHCDQLHVDPENFRLLGNELVVVLARTFGKEFTPELQAAYQKVVAGVANALAHRYH

Annotated regions:
phrase: EALGRLLVVYPWTQRFFESFGDLSSADAVMNNPKVKAHGKKVLDSFADGLKHLDNLKGTFAALSELHCDQLHVDPENFRLLGNELVVVLARTFGKEFTPELQAAYQKVVAGVANA
type: DOMAIN
name: Globin
description: Globin

phrase: VHLTAEEKDAVLGLWGKVNVQEVGGEALGRLLVVYPWTQRFFESFGDLSSADAVMNNPKVKAHGKKVLDSFADGLKHLDNLKGTFAALSELHCDQLHVDPENFRLLGNELVVVLARTFGKEFTPELQAAYQKVVAGVANALAHRY
type: DOMAIN
name: Globin
description: Globin
Protein sequence:
MLFSKETPWRRLEGMSFGMYSSAELRKLSVKSVTNPLLLDNVGNPAPNGLYDLSLGPADVKEICTTCMQDFNSCPGHFGHVDLQLPVYNPFLFDKLYMLVRGTCLSCHMLTCPRAAIHLLLNQLRLLDVGAMKEVYELPIILNQASSPKASGAEIQEALEEFSSPIVQANKNSRGCAPIKHICEMKSSLNTEFWKTHMTSRKCPNCSASKSQIRREHNSKLIVNHSGVKDDGGVQKDDLQVAKRGYLTPSLARDHVTKVWEKEGFFLKHLFSGLAENSPNGFSPDMFFLELLMVPPSSRLGDQMFTNGQTVNMQAVLKDNIIIQKLLALIATEKAETVDGTRTELEEPSETTEPAQVDQAFLAGIPGQTLTDKLYNIWIRLQSHVNIVFDSDMDKLMTEKFPGIRQILEKKEGLFRKHMMGKRVDFAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKELRQAVINGPDVHPGASIVINEDGSRTILSRTNPTQREAIAKQLLTPSTGQHRMPMKIVNRHIKNGDVLLLNRQPTLHRPSIQAHCARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAYTLVSTAQQYLVPKDGKPLAGLIQDHMVSGTSMTIRGCFFPRDQYMELVYRGLTDKRGRVKLLPPALIKPQKLWTGKQVVSTLLLNIIPENHIPLNLTGKAKIPSKAWVKEPPRSVPGYNPDSMCDSQVVIRNGELLVGVLDKAHYGSSAYGLVHCCYELYGGETSGNLLSCLA

Annotated regions:
phrase: SFGMYSSAELRKLSVKSVTNPLLLDNVGNPAPNGLYDLSLGPADVKEICTTCMQDFNSCPGHFGHVDLQLPVYNPFLFDKLYMLVRGTCLSCHMLTCPRAAIHLLLNQLRLLDVGAMKEVYELPIILNQASSPKASGAEIQEALEEFSSPIVQANKNSRGCAPIKHICEMKSSLNTEFWKTHMTSRKCPNCSASKSQIRREHNSKLIVNHSGVKDDGGVQKDDLQVAKRGYLTPSLARDHVTKVWEKEGFFLKHLFSGLAENSPNGFSPDMFFLELLMVPPSSRLGDQMFTNGQTVNMQAVLKDNIIIQKLLALIATEKAETVDGTRTELEEPSETTEPAQVDQAFLAGIPGQTLTDKLYNIWIRLQSHVNIVFDSDMDKLMTEKFPGIRQILEKKEGLFRKHMMGKRVDFAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKELRQAVINGPDVHPGASIVINEDGSRTILSRTNPTQREAIAKQLLTPSTGQHRMPMKIVNRHIKNGDVLLLNRQPTLHRPSIQAHCARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAYTLVSTAQQYLVPKDGKPLAGLIQDHMVSGTSMTIRGCFFPRDQYMELVYRGLTDKRGRVKLLPPALIKPQKLWTGKQVVSTLLLNIIPENHIPLNLTGKAKIPSKAWVKEPPRSVPGYNPDSMCDSQVVIRNGELLVGVLDKAHYGSSAYGLVHCCYELYGGETSGNLLSCL
type: DOMAIN
name: DNA-dir_RNA_pol1_lsu_N
description: DNA-directed RNA pol I, largest subunit, N-terminal domain

phrase: QYLVPKDGKPLAGLIQDHMVSGTSMTIRGCFFPRDQYMELVYRGLTDKRGRVKLLPPALIKPQKLWTGKQVVSTLLLNIIPENHIPLNLTGKAKIPSKAWVKEPPRSVPGYNPDSMCDSQVVIRNGELLVGVLDKAHYGSSAYGLVHCCYELYGGETSGNLLS
type: DOMAIN
name: RNA_pol_Rpb1_3
description: RNA polymerase Rpb1, domain 3

phrase: DMFFLELLMVPPSSRLGDQMFTNGQTVNMQAVLKDNIIIQKLLALIATEKAETVDGTRTELEEPSETTEPAQVDQAFLAGIPGQTLTDKLYNIWIRLQSHVNIVFDSDMDKLMTEKFPGIRQILEKKEGLFRKHMMGKRVDFAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKELRQAVINGPDVHPGASIVINEDGSRTILSRTNPTQREAIAKQLLTPSTGQHRMPMKIVNRHIKNGDVLLLNRQPTLHRPSIQAHCARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAYTLVSTAQQYLVPKDGKPLAGLIQDHMVSGTSM
type: DOMAIN
name: RNA_pol_N
description: RNA polymerase, N-terminal

phrase: GKRVDFAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKELRQAVINGPDVHPGASIVINEDGSRTILSRTNPTQREAIAKQLLTPSTGQHRMPMKIVNRHIKNGDVLLLNRQPTLHRPSIQAHCARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAEAYTLV
type: DOMAIN
name: RNA_pol_asu
description: RNA polymerase, alpha subunit

phrase: RLEGMSFGMYSSAELRKLSVKSVTNPLLLDNVGNPAPNGLYDLSLGPADVKEICTTCMQDFNSCPGHFGHVDLQLPVYNPFLFDKLYMLVRGTCLSCHMLTCPRAAIHLLLNQLRLLDVGAMKEVYELPIILNQASSPKASGAEIQEALEEFSSPIVQANKNSRGCAPIKHICEMKSSLNTEFWKTHMTSRKCPNCSASKSQIRREH
type: DOMAIN
name: RNA_pol_Rpb1_1
description: RNA polymerase Rpb1, domain 1