nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MLGFLTARQTGLDDPMRLRRAESTRRVLGLKLNPDRDVERIHGNGINTIDIEAIEGRYMLSGGADGVIVIYDLENYSGKLQYTCKAVCTIGRSSRYVHKFSVETVQWYPYDTGMFVSSSFDKTMKVWDTETLKVNYGKVCNESRKRLQFTVSHGCSPEFVFVPCGSSVAVYALHTGELITMLRGHYNYVDCCEFHPAYQNYKDMEFFNIKSSAALIYDEFIQNADSRTEKWLLMSSPLPQTIIIAAYIYFVTSLGPRIMENRKAFDLKGILIIYNFGVVALSLYMCYEFVMSGWGTGYSFRCDLVDYSDSPQAMRMAATCWLYYFSKFIEMFDTIFFVLRKKNSQVTFLHVYHHSIMPFTWWFGVRFAPGGLGTFHALLNCVVHVIMYTYYGLTAMGPNYQKYLWWKKYLTTIQLIQFVMVTSHISQYFFMKDCPYQFPIFIYIIGLYGLIFLFLFLNFWYHAYTKGKRLPKVLQAQTWAHHTNGVMNGNASHDKDE

Annotated regions:
phrase: KLNPDRDVERIHGNGINTIDIEAIEGRYMLSGGADGVIVIY
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: TCKAVCTIGRSSRYVHKFSVETVQWYPYDTGMFVSSSFDKTMKVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: HKFSVETVQWYPYDTGMFVSSSFDKTMKVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: RYVHKFSVETVQWYPYDTGMFVSSSFDKTMKVWDTE
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: VTFLHVYH
type: CONSERVED_SITE
name: ELO_CS
description: ELO family, conserved site
Protein sequence:
MLFKQWNDLPEPKHLLDLPEISKNLQSLEVCPVPKVEFPQDLDVPQYSTAVITTKIMNPLFPKNLLQLTSIGEIKTTLTVKSPSLPQSSGKHSWNYDENFPNEVDPDQKNDTADETVYGFSFPIYSFGKTLLFSMEENFISISPIFGNMISRSIISQLAQFSPDIIVIGTSDKIASMKVMTENECTLQPPEFITGFIGSVLTQLIVGPSKGLKFKCLVAPSEGPNGFEKLSLSDMGSLVDLCGQWLGFEPSRYSEECYRLWRCDSAAIGAQSGLYI

Annotated regions:
Protein sequence:
MMLKSCGLIFKGKRFVRLFIFIAVCLGFLIAVTILAGLTIFDRQHNHILHDYVARNDDIVVLSTTYYENSKSFPPNTAVILFNSVQVFHLKYSNLNVVAETMQGNVEVQFKIQPVINTIPFFCKWVPYLAVGQVPEDHVLLKLSTNKIDGMELSLRTPYETPRKVVACFSPLFLNERWQLLLATVEIYSHYGAFMHFYVRSIITDLFKLIKDNKNTRISPWSAIRIGESRAASPMFDPNTELEFRNQASAMTDCLLQYKEAAEFIVFPDPDDILVPVLGKNYYEEFTQAFKMFPTAGAVVYNMTQTSIESSMTPALYSPISMLASMKFKGEQKWGKLVVRPERVDSTWIHRSYAIKEGFEQKVMPVDVNAFYHLRIWKFPEVPTFNRSKISNPPFFDPYHLNATKRAIYKISDGLKIQRKFKNRVSQGTMKTIYSRLPKVSLYYPLIEVCYNRIFYSMKDIGTCRGPEYCNIPAFPGLRCTNVASEFVTYKSYRNIYIHQLISTDFEEGDNGCTL

Annotated regions:
Protein sequence:
MTISSTQLRVRWLGKVPYAEALAVQESMFQHGSGNALLLMEHPHVFTYGPSAELEKNLKCDPAEVGADFVKVKRGGDITYHGPGQLVGYPIVNLQPKHGADGPADSVAYVHSVEQVIIDSLREVGLSSADRFPGYPGVWVDVDGGNPRKICAIGVRVGRRRTMHGFAVNVSTDLHYMSTNIVPCGIADYPVTSLEAEGISVSMKDFTEVVARHAANMWGNGLIERQDVAWKHTPDDLSAFSRGEGPGQPVRMLGRLAQAGVKESISLSERKPDWIRPHVKHGEEVLTLKKTLRDLSLVTVCEEAGCPNLSECWNDGTATFMVLGERCTRACGFCLVDTQKPEAPDSNEPSHVAEAVARMGLKFAVLTMVARDDLADEGMGHVAQCIQAIRTRDASVQVETLISDARGTASLDVLINARPDVFNHNVETVPRLQRAVRPSAGYARSLSVLARGKAAGLTVKSGLIVGMGETDDEIVGVLTDLADIGVDIVTIGQYLRPTTNHLPVARWVEPAVFDMYKRVGEEFGIGHVESSPLTRSSYHARESAEHAVPVTIGTR

Annotated regions:
phrase: RGGDITYHGPGQLVG
type: CONSERVED_SITE
name: Octanoyltransferase_CS
description: Octanoyltransferase, conserved site

phrase: SERKPDWIRPHVKHGEEVLTLKKTLRDLSLVTVCEEAG
type: DOMAIN
name: LIAS_N
description: Lipoyl synthase, N-terminal

phrase: PYAEALAVQESMFQHGSGNALLLMEHPHVFTYGPSAELEKNLKCDPAEVGADFVKVKRGGDITYHGPGQLVGYPIVNLQPKHGADGPADSVAYVHSVEQVIIDSLREVGLSSADRFPGYPGVWVDVDGGNPRKICAIGVRVGRRRTMHGFAVNVSTDLHYMSTNIVPCGIADYPVTSLEAEGISVSMKDFTEVVAR
type: DOMAIN
name: BPL_LPL_catalytic
description: Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain

phrase: HGSGNALLLMEHPHVFTYGPSAELEKNLKCDPAEVGADFVKVKRGGDITYHGPGQLVGYPIVNLQPKHGADGPADSVAYVHSVEQVIIDSLREVGLSSADRFPGYPGVWVDVDGGNPRKICAIGVRVGRRRTMHGFAVNVSTDLHYMSTNIVPCGIADYPVTSLEAEGISVSMKDFTEVVARHAANMWGNG
type: DOMAIN
name: BPL_LPL_catalytic
description: Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain

phrase: WNDGTATFMVLGERCTRACGFCLVDTQKPEAPDSNEPSHVAEAVARMGLKFAVLTMVARDDLADEGMGHVAQCIQAIRTRDASVQVETLISDARGTASLDVLINARPDVFNHNVETVPRLQRAVRPSAGYARSLSVLARGKAAGLTVKSGLIVGMGETDDEIVGVLTDLADIGVDIVTIGQYLRPTTNHLPVARWVEPAVFDMYKRVGEEFGI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VLGERCTRACGFCLVDTQKPEAPDSNEPSHVAEAVARMGLKFAVLTMVARDDLADEGMGHVAQCIQAIRTRDASVQVETLISDARGTASLDVLINARPDVFNHNVETVPRLQRAVRPSAGYARSLSVLARGKAAGLTVKSGLIVGMGETDDEIVGVL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: ISLSERKPDWIRPHVKHGEEVLTLKKTLRDLSLVTVCEEAGCPNLSECWNDGTATFMVLGERCTRACGFCLVDTQKPEAPDSNEPSHVAEAVARMGLKFAVLTMVARDDLADEGMGHVAQCIQAIRTRDASVQVETLISDARGTASLDVLINARPDVFNHNVETVPRLQRAVRPSAGYARSLSVLARGKAAGLTVKSGLIVGMGETDDEIVGVLTDLADIGVDIVTIGQYLRPTTNHLPVARWVEPAVFDMYKRVGEEFGIGHVESSPLTRSSYHARESAE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TATFMVLGERCTRACGFCLVDTQKPEAPDSNEPSHVAEAVARMGLKFAVLTMVARDDLADEGMGHVAQCIQAIRTRDASVQVETLISDARGTASLDVLINARPDVFNHNVETVPRLQRAVRPSAGYARSLSVLARGKAAGLTVKSGLIVGMGETDDEIVGVLTDLADIGVDIVTIGQYLRPTTNHLPVARWVEPAVFDMYK
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain
Protein sequence:
MSEMEVEKPDLTLYNTMTQLKEVYKPMNPGKIGIYVCGITAYDYSHIGHARAAVSFDLLYRYLRHLGYQVTYVRNFTDVDDKAKNCGEKPLDLSNRFCEEYLLDMAALQCLLPTHQPRVSDHMEQIIKMIEKIIENGCGYAVGGDVFFSVDKSPSYGQLSGQRLDHTQAGKRVAVDSRKRNPADFALRKAAKSGEPSWESPWGHGRPGWHIEFDIHGGGADLKFPHHENEIAQTCAACEDSGVNYWLHNGHVTNNNVKMGKSLNNFFTIRQIAANYHPLALRHFLMSAQYRSPLNYSVSQLESSSDALYSLSPYREEMSGDVGKTQQSAEAKEMIKKVKNALKFINVSISKLKKMQKKQRMSLVVSLVEVEKAVREVLDVLGLLTTLSYGELLKDMKQKALTRAGMGEEEVLQRIEERNMARKSKDFRRSDRIRELLAFKGIFLEDVPGDTVWRPSTPLTKPKSGLGLGMTAIVFAIVFTFLGFFFYSR

Annotated regions:
phrase: TLYNTMTQLKEVYKPMNPGKIGIYVCGITAYDYSHIGHARAAVSFDLLYRYLRHLGYQVTYVRNFTDVDDKAKNCGEKPLDLSNRFCEEYLLDMAALQCLLPTHQPRVSDHMEQIIKMIEKIIENGCGYAVGGDVFFSVDKSPSYGQLSGQRLDHTQAGKRVAVDSRKRNPADFALRKAAKSGEPSWESPWGHGRPGWHIEFDIHGGGADLKFPHHENEIAQTCAACEDSGVNYWLHNGHVTNNNVKMGKSLNNFFTIRQIAANYHPLALRHFLMSAQYRSPLNY
type: DOMAIN
name: tRNA-synt_1_cat_dom
description: tRNA synthetases class I, catalytic domain

phrase: KPMNPGKIGIYVCGITAYDYSHIGHARAAVSFDLLYRYLRHLGYQVTYVRNFTDVDDKAKNCGEKPLDLSNRFCEEYLLDMAALQCLLPTHQPRVSDHMEQIIKMIEKIIENGCGYAVGGDVFFSVDKSPSYGQLSGQRLDHTQAGKRVAVDSRKRNPADFALRKAAKSGEPSWESPWGHGRPGWHIEFDIHGGGADLKFPHHENEIAQTCAACEDSGVNYWLHNGHVTNNNVKMGKSLNNFFTIRQIAANYHPLALRHFLMSAQYRSPLNYSVSQLES
type: DOMAIN
name: tRNA-synt_1_cat_dom
description: tRNA synthetases class I, catalytic domain
Protein sequence:
MNSKVLNTLEYQQVKQQLAPYLVSATGQQALNELHPMTSVADIQRALDETNDGAEVYRLKGGIPVARLADIKPHMKRLAIGATLNGSELGQVGRVLRTTRAITRFFAELLEDAPENDIRHLFDEVAELVTLPDVTKRLATAIEGDGHITDEASPELSRIRSNIRRTETEIRNQMGHYTRGHDAKYLSDPIITIRNDRYVIPVKAENRSRFGGIVHDQSASGQTLFIEPQAVMAMNDRLRQNQVAEKQEEQRILEELSNLIAPYQDEIINNAAILGHFDFINAKARYAHDMKATEPAVSPQNEVYLRQARHPLIDPRKVVANDISLGTDYQAMVITGPNTGGKTITLKTLGLLQLMAQSGLFIPVEAGSRVGVYNEIFADIGDEQSIEQNLSTFSSHMENIESFLAQIDAHSLVLVDELGAGTDPQEGAALAIAILDAIGAKGTQVVATTHYPELKAYGFNRPDTINASMEFDEETLKPTYRLLVGIPGRSNALDIAQRLGIPQAIVDQARSLTDTDSQDLNAMIADLVTKRKQVEDEQLHLKTQVADSEKLHRQLKSEFNAYQQRKDQLIEDAKVQANTIVEQSKTKADAIISDLRKKQLASGTATVKENELIDAKGALNALEQQPKLKKNRVLRRAKAQHDFHEGDDVLVKSYGQRGVLMRQMGKHEWEVQLGILKMKISDGDLERVKPEEPKRARATVQSAHASHVSPNLDLRGVRYEDAMTQVDRYIDAALLAGYPSVTIVHGKGTGALREGITNYLKSNRQVKS

Annotated regions:
phrase: SLVLVDELGAGTDPQE
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: LDLRGVRYEDAMTQVDRYIDAALLAGYPSVTIVHGKGTGALREGITNYLKSNRQVK
type: DOMAIN
name: Smr_dom
description: Smr domain

phrase: EGDDVLVKSYGQRGVLMRQMGKHEWEVQLGILKMKISDGD
type: DOMAIN
name: MSSS
description: MutS2 and Smr-associated SH3 domain

phrase: YQAMVITGPNTGGKTITLKTLGLLQLMAQSGLFIPVEAGSRVGVYNEIFADIGDEQSIEQNLSTFSSHMENIESFLAQIDAHSLVLVDELGAGTDPQEGAALAIAILDAIGAKGTQVVATTHYPELKAYGFNRPDTINASMEFDEETLKPTYRLLVGIPGRSNALDIAQRLGIPQAIVDQARSLT
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: LDLRGVRYEDAMTQVDRYIDAALLAGYPSVTIVHGKGTGALREGITNYLKSNRQVK
type: DOMAIN
name: Smr_dom
description: Smr domain

phrase: MVITGPNTGGKTITLKTLGLLQLMAQSGLFIPVEAGSRVGVYNEIFADIGDEQSIEQNLSTFSSHMENIESFLAQIDAHSLVLVDELGAGTDPQEGAALAIAILDAIGAKGTQVVATTHYPELKAYGFNRPDTINASMEFDEETLKPTYRLLVGIPGRSNALDIAQRLGIPQAIVDQARSL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: SPNLDLRGVRYEDAMTQVDRYIDAALLAGYPSVTIVHGKGTGALREGITNYLKSNRQV
type: DOMAIN
name: Smr_dom
description: Smr domain

phrase: LEYQQVKQQLAPYLVSATGQQALNELHPMTSVADIQRALDETNDGAEVYRLKGGIPVARLADIKPHMKRLAIGATLNGSELGQVGRVLRTTRAITRFFAELLEDAPENDIRHLFDEVAELVTLPDVTKRLATAIEGDGHITDEASPELSRIRSNIRRTETEIRNQMGHYTRGHDAKYLSDPIITIRNDRYVIPVKAENRSRFGGIVHDQSASGQTLFIEPQAVMAMNDRLRQNQVAEKQEEQRILEELSNLIAPYQDEIINNAAILGHFDFINAKARYAHDMKATEPAVSPQNEVYLRQARHPLIDP
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core
Protein sequence:
MNIRNLLNDRVKSAMNDAGIPADYSPHLAVSKKAGFGDYQANGAMGAAKALKTNPREVAQKIIDNLDLNGIASKVEIAGPGFINIHLDPKWLAQQTVAVTNSTNLGILPKNNPETVVIDYSSPNLAKEMHVGHLRSTIIGDAIARVLEFTGDKVIRQNHVGDWGTQFGMLIAELEDQLGSGERPELALQDLEGFYQQAKKHFDDDPAFADRARDYVVKLQSGDAQVNKLWQEFRRVSLLHAEEIYRKLNVTLGEADVRGESAYNDDLAPVVAELEAQGLAVEDQGAKVVFLHELADKNGDPSVAIIQKKDGGYLYSTSDLAALRYRVGTLKANRILYFIDARQSLHMQQVFTLARKAGFADEWLSTEHHAFGTMLGSDGKPFKTRSGGTVKLAQLLDEAVERAAKEVRTKNPDLTEEEMAEVASKVGIGAVKYADLCKTRTNDYVFNWESMLAFEGNTGPYMQYAYTRIRSIFRRANENMDTFESEVNLTEPQEVQLAIKLLQLPEIVEQIAADAYPHVMCNYLYDLASLFMTFYEACPILKEGVEPAVKTSRLQLSKGVARTLAQGLDLLGIEVMEKM

Annotated regions:
phrase: MNIRNLLNDRVKSAMNDAGIPADYSPHLAVSKKAGFGDYQANGAMGAAKALKTNPREVAQKIIDNLDLNGIASKVEIAGPGFINIH
type: DOMAIN
name: Arg-tRNA-synth_N
description: Arginyl tRNA synthetase N-terminal domain

phrase: LNDRVKSAMNDAGIPADYSPHLAVSKKAGFGDYQANGAMGAAKALKTNPREVAQKIIDNLDLNGIASKVEIAGPGFINIH
type: DOMAIN
name: Arg-tRNA-synth_N
description: Arginyl tRNA synthetase N-terminal domain

phrase: TVVIDYSSPNLAKEMHVGHLRSTIIGDAIARVLEFTGDKVIRQNHVGDWGTQFGMLIAELEDQLGSGERPELALQDLEGFYQQAKKHFDDDPAFADRARDYVVKLQSGDAQVNKLWQEFRRVSLLHAEEIYRKLNVTLGEADVRGESAYNDDLAPVVAELEAQGLAVEDQGAKVVFLHELADKNGDPSVAIIQKKDGGYLYSTSDLAALRYRVGTLKANRILYFIDARQSLHMQQVFTLARKAGFADEWLSTEHHAFGTMLGSDGKPFKTRS
type: DOMAIN
name: ArgRS_core
description: Arginyl-tRNA synthetase, catalytic core domain

phrase: PNLAKEMHVGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: NNPETVVIDYSSPNLAKEMHVGHLRSTIIGDAIARVLEFTGDKVIRQNHVGDWGTQFGMLIAELEDQLGSGERPELALQDLEGFYQQAKKHFDDDPAFADRARDYVVKLQSGDAQVNKLWQEFRRVSLLHAEEIYRKLNVTLGEADVRGESAYNDDLAPVVAELEAQGLAVEDQGAKVVFLHELADKNGDPSVAIIQKKDGGYLYSTSDLAALRYRVGTLKANRILYFIDARQSLHMQQVFTLARKAGFADEWLSTEHHAFGTMLGSDGKPFKTRSGGTVKLAQLLDEAVERAAKEVRTKNPDLTEEEMAEVASKVGIGAVKYADLCKTRTNDYVFN
type: DOMAIN
name: ArgRS_core
description: Arginyl-tRNA synthetase, catalytic core domain

phrase: MQYAYTRIRSIFRRANENMDTFESEVNLTEPQEVQLAIKLLQLPEIVEQIAADAYPHVMCNYLYDLASLFMTFYEACPILKEGVEPAVKTSRLQLSKGVARTLAQGLDLLGIEVMEK
type: DOMAIN
name: DALR_anticod-bd
description: DALR anticodon binding

phrase: MQYAYTRIRSIFRRANENMDTFESEVNLTEPQEVQLAIKLLQLPEIVEQIAADAYPHVMCNYLYDLASLFMTFYEACPILKEGVEPAVKTSRLQLSKGVARTLAQGLDLLGIEVMEK
type: DOMAIN
name: DALR_anticod-bd
description: DALR anticodon binding
Protein sequence:
MFVKTGDTVKVIAGKDRGTTGKVIKALPKVNKVVVEGVAIMKKHQKPNSENPSGAILEIEAPIHVSNVQVLDKNGVAGRVGYKVVDDKKVRFNKKSGEILD

Annotated regions:
phrase: FVKTGDTVKVIAGKDRGTTGKVIKALP
type: DOMAIN
name: KOW
description: KOW

phrase: GDTVKVIAGKDRGTTGKVIKALPKVNKVVVEGVAIMKKHQKPNSENPSGAILEIEAPIHVSNVQ
type: DOMAIN
name: Ribosomal_uL24_KOW
description: Large ribosomal subunit protein uL24, KOW domain

phrase: GDTVKVIAGKDRGTTGK
type: CONSERVED_SITE
name: Ribosomal_uL24_CS
description: Large ribosomal subunit protein uL24, conserved site

phrase: GDTVKVIAGKDRGTTGKVIKALPKVNKVVV
type: DOMAIN
name: KOW
description: KOW
Protein sequence:
MAGKGQRDHVILGNDQTGERIYLTSKNRRNTPDRLVLKKYSPKLHKVVEFKEVK

Annotated regions:
phrase: YLTSKNRRNTPDRLVLKKY
type: CONSERVED_SITE
name: Ribosomal_bL33_CS
description: Large ribosomal subunit protein bL33, conserved site
Protein sequence:
MRTSPWVWILGFLLVLVLFNYLFAPRPNPILYSEFLVKVEEGQIVGTLEISETSVSGRFREGGDARTFTTTIPPILQGTPQLTELLNDRGIAYTGVTPNPLSGFLLGWVIPLMLFAGLWFFLIRRMSGAQAGAALNLGRNRVRIYDRKEMKTSFADVAGVDEAKEELREIVDFLKNPKKYQRLGGRIPKGVLLLGPPGCGKTLLARAVAGEADVPFFFMSGSEFVEMFVGLGAARVRELFQQAKEKAPALVFLDEIDTIGKGRGGALGAGFGAHDEREQTLNQLLVEMDGFDSSKGVIIMAATNRPDVLDPALVRPGRFDRQVVVDRPDLKGREEILKVHTRGVAMDPQVDLRIVAARTPGFTGADLANVVNEAALLAARRERDSVTMLELEEAIDRTVAGLERKSRVMSDKEKERVAVHEMGHAIVALTAPTADPVHRVSIIPRGAAALGMTMQRPLEDRYLLTEPELHDRLAILLGGRTAEEIVFDQVVSTGAQNDLERATEIARAMVTEYGMSPKVGPLSFGGNGFRSPEGRLLYPGAAPEFSDELASLIDAEVARLVNEAHERAREVLTQHRRFLEQMAEILIATEVIDGPDLKAYFEGSKEIPTGERLREQAEGREREPELPPGPDVIVKPPQGSSPTGTPPRRP

Annotated regions:
phrase: VLLLGPPGCGKTLLARAVAGEADVPFFFMSGSEFVEMFVGLGAARVRELFQQAKEKAPALVFLDEIDTIGKGRGGALGAGFGAHDEREQTLNQLLVEMDGFDSSKGVIIMAATNRPDVLDPALVRPGRFDRQVVV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: RVMSDKEKERVAVHEMGHAIVALTAPTADPVHRVSIIPRGAAALGMTMQRPLEDRYLLTEPELHDRLAILLGGRTAEEIVFDQVVSTGAQNDLERATEIARAMVTEYGMSPKVGPLSFGGNGFRSPEGRLLYPGAAPEFSDELASLIDAEVARLVNEAHERAREVLTQHRRFLEQMAEILIATEVIDGPDL
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: VIIMAATNRPDVLDPALV
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: IPKGVLLLGPPGCGKTLLARAVAGEADVPFFFMSGSEFVEMFVGLGAARVRELFQQAKEKAPALVFLDEIDTIGKGRGGALGAGFGAHDEREQTLNQLLVEMDGFDSSKGVIIMAATNRPDVLDPALVRPGRFDRQVVVDRP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: PWVWILGFLLVLVLFNYLFAPRPNPILYSEFLVKVEEGQIVGTLEISETSVSGRFREGGDARTFTTTIPPILQGTPQLTELLNDRGIAYTGV
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular

phrase: VDLRIVAARTPGFTGADLANVVNEAALLAARRERDSVTMLELE
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain
Protein sequence:
MRQATELDQSIHCASAANLDLVQFAAELCELLVEENFGELFGRIFATLSRYDRLNLPRLKAYSELPNRQLLPALAAMIQQHLVYHYTSYDDGVTYYEANMQSAYYLVRSGKILEFVEERLGKYAATVLSTIMNLGHAQVSYLETLPELTSEAVKANGVSEEHGEHEEGEEQSNGLNGEHSNEQPELLHPTLKALAAHGYIIRVREAQFQSHADNILDAERVIRSKPEMKALKGKRLEEAVIEGTLGLLKERTDGDLTRGLIVHGVPRGAKRKYSSRRADEPNKKPRTDFASVDEIDEQDEEEENEWLDDEMGYDTTPMESGLVVRVNYNKLDVALRNRRFIELAEQGVSPETAEVYECLLRRIEYQTHQCRDTAEIPREGEEGEQYSVPIALSALAEDVDPRLDLSSSTGPMDTSQPDGRRGKRPLESDVDGTNHEGANGLSSGGNRTFEIDQHLSLLAQPPHNLTSKRMVSGLITWTVEFRHLARKLRHLELERMIEARYGDVALRVVRVLHAKGKLDEKRLQEISLLPFKDLRQVLASMQAGGFVDLQEVPRDAQRQPSRTIYLWYYDPDRICNSVLQDTYKAMSRCLQRLRFERSRIKDFLEKTERSDVKGNEQRFLSEPELVLLEQWRAKEALLLGEVARLDEMVAVMRDY

Annotated regions:
phrase: ELCELLVEENFGELFGRIFATLSRYDRLNLPRLKAYSELPNRQLLPALAAMIQQHL
type: DOMAIN
name: RNA_pol_III_RPC82-rel_HTH
description: RNA polymerase III subunit RPC82-related, helix-turn-helix

phrase: LKALAAHGYIIRVREAQFQSHADNILDAERVIRSKPEMKALKGKRLEEAVIEGTLGLLKERTDGDLTRGLIVHGVPRGAKRKYSSRRADEPNKKPRTDFASVDEIDEQDEEEENEWLDDEMGYDTTPMESGLVVRVNYNKLDVALRNRRFIELAEQGVSPETAEVYECLLRRIEYQTHQCRDTAEIPREGEEGEQYSVPIALSALAEDVDPRLDLSSSTGPMDTSQPDGRRGKRPLESDVDGTNHEGANGLSSGGNRTFEIDQHLSLLAQPPHNLTSKRMVSGLITWTVEFRHLARK
type: DOMAIN
name: RNA_pol_III_Rpc82_C
description: RNA polymerase III Rpc82, C -terminal

phrase: LERMIEARYGDVALRVVRVLHAKGKLDEKRLQEISLLPFKDLRQVLASMQAGGFVDLQEVPRDAQRQPSRTIYLW
type: DOMAIN
name: POLR3C_WHD
description: DNA-directed RNA polymerase III subunit RPC3, winged-helix domain
Protein sequence:
MDHFKQLEVWFVIGSQHLYGPETLRQVKENAEKVVAGLNQQANLPVKLVLKPLVKTPDEILALCRDANYQDNCIGLLTWLHTFSPAKMWIGGLSVLSKPLLQFHTQFNAEVPWDTMDMDFMNLNQTAHGGREFGFIGARMRQAHQVVVGHWQDKNAHVRIGKWMRVAAAIQESKQLKVARFGDNMREVAVTEGDKVGAQIQFGYSVSAWGLGDLTAVVDAVSKGDIDALIEEYETSYQLTDAVKLNGANRQNLLDAAQIELGMKRFLEQGGYHAFTTDFENLYGLKQLPGLAVQRLMQQGYGFGGEGDWKTAALLRIMKVMAGGLSGGTSFMEDYTYNFQNGNDLVVGSHMLEVCPTIAKEQKPILDAQHLGIGGKADPARLIFSTPAGPSLNASVIDMGDRFRMLVNLVDTIEQPRPLPKLPVARAIWKAQPSLEVAAEAWILAGGAHHTVFSQALDLDHMRLYAEMQNIELLVIDNETRLHEFKDALRWNEVYYKLCSR

Annotated regions:
phrase: GTSFMEDYTYNFQNGNDLVVGSHMLEVCPTIAKEQKPILDAQHLGIGGKADPARLIFSTPAGPSLNASVIDMGDRFRMLVNLVDTIEQPRPLPKLPVARAIWKAQPSLEVAAEAWILAGGAHHTVFSQALDLDHMRLYAEMQNI
type: DOMAIN
name: Ara_Isoase_C
description: L-arabinose isomerase, C-terminal

phrase: EVWFVIGSQHLYGPETLRQVKENAEKVVAGLNQQANLPVKLVLKPLVKTPDEILALCRDANYQDNCIGLLTWLHTFSPAKMWIGGLSVLSKPLLQFHTQFNAEVPWDTMDMDFMNLNQTAHGGREFGFIGARMRQAHQVVVGHWQDKNAHVRIGKWMRVAAAIQE
type: DOMAIN
name: AraA_N
description: L-arabinose isomerase, N-terminal domain

phrase: KVARFGDNMREVAVTEGDKVGAQIQFGYSVSAWGLGDLTAVVDAVSKGDIDALIEEYETSYQLTDAVKLNGANRQNLLDAAQIELGMKRFLEQGGYHAFTTDFENLYGLKQLPGLAVQRLMQQGYGFGGEGDWKTAALLRIMKVMA
type: DOMAIN
name: AraA_central
description: L-arabinose isomerase, central domain
Protein sequence:
MTSAVGNTGMAAPQRVAALNRPNMVSVGTIVFLSQELMFFAGLFAMYFVSRANGLANGSWGEQTDHLNVPYALLITVILVSSSVTCQFGVFAAERGDVYGLRKWFLVTIILGSIFVIGQGYEYITLVGHGLTIQSSVYGSAFFITTGFHALHVIAGVMAFVVVLMRIHKSKFTPAQATAAMVVSYYWHFVDVVWIGLFITIYFIQ

Annotated regions:
phrase: VSVGTIVFLSQELMFFAGLFAMYFVSRANGLANGSWGEQTDHLNVPYALLITVILVSSSVTCQFGVFAAERGDVYGLRKWFLVTIILGSIFVIGQGYEYITLVGHGLTIQSSVYGSAFFITTGFHALHVIAGVMAFVVVLMRIHKSKFTPAQATAAMVVSYYWHFVDVVWIGLFITIY
type: DOMAIN
name: Cyt_c_oxidase-like_su3
description: Cytochrome c oxidase subunit III-like

phrase: VSVGTIVFLSQELMFFAGLFAMYFVSRANGLANGSWGEQTDHLNVPYALLITVILVSSSVTCQFGVFAAERGDVYGLRKWFLVTIILGSIFVIGQGYEYITLVGHGLTIQSSVYGSAFFITTGFHALHVIAGVMAFVVVLMRIHKSKFTPAQATAAMVVSYYWHFVDVVWIGLFITIYFI
type: DOMAIN
name: Cyt_c_oxidase-like_su3
description: Cytochrome c oxidase subunit III-like
Protein sequence:
MSESPKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLEEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRADVNGKSRLLRGLDGNKDQSYFLYTLGHEQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFRDFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKDGSEDPWYVVDKDVENNVLIVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTLRCTVKTRYRQTDIPCTINALNDDRIEVIFDEPVAAVTPGQSAVFYSGEVCLGGGIIEQRLPLTV

Annotated regions:
phrase: RDFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKDGSEDPWYVVDKDVENNVLIVA
type: DOMAIN
name: MnmA-like_central
description: tRNA-specific 2-thiouridylase MnmA-like, central domain

phrase: GLIAQQLHWVDREPFTGTLRCTVKTRYRQTDIPCTINALNDDRIEVIFDEPVAAVTPGQSAVFYSGEVCLGGGI
type: DOMAIN
name: MnmA-like_C
description: tRNA-specific 2-thiouridylase MnmA-like, C-terminal domain
Protein sequence:
MAPKGEKKPAEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGEKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

Annotated regions:
phrase: AEKKPAEEKKSTVAEKAPAEKKPKAGKKLPKEGGSAAGEKKKKRSKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSRLARYNKKPTITSREIQTAVR
type: DOMAIN
name: Histone_H2A/H2B/H3
description: Histone H2A/H2B/H3

phrase: REIQTAVRLVLPGELAKHAVSE
type: CONSERVED_SITE
name: HISTONE_H2B_site
description: Histone H2B, conserved site
Protein sequence:
MLKTPLYESHIAANAKMVDFSGWSMPINYGSQIQEHNNVREDCGIFDVSHMLAVDIQGSEAEKFLRYLLANDVAKLQENKAQYGCMLNHDAGIVDDLITYKVTDEHFRIVVNAGNRESDVAWFNQNAQNFDVAITPQTDLAIVAVQGPKAVDVIKRVVTKEIAAEIEALLPFSFKFFSKWMVARTGYTGEDGFEVILPTTQVKKFWDSLLENGAQPAGLGARDTLRLEAGMHLYGADMDISTTPLERGLGWSVDLSDEHRDFIGKKAYLAKKAQGVDTKWVGVVLKTKGVLRAGQEIDFDNGEKGYITSGSFSPTLKVAIGLAYVPKQADNPVVNIRGKELEVELVKPKFVKNGKSLI

Annotated regions:
phrase: LYESHIAANAKMVDFSGWSMPINYGSQIQEHNNVREDCGIFDVSHMLAVDIQGSEAEKFLRYLLANDVAKLQENKAQYGCMLNHDAGIVDDLITYKVTDEHFRIVVNAGNRESDVAWFNQNAQNFDVAITPQTDLAIVAVQGPKAVDVIKRVVTKEIAAEIEALLPFSFKFFSKWMVARTGYTGEDGFEVILPTTQVKKFWDSLLENGAQPAGLGARDTLRLEAGMHLYGADMDISTTPLERGLG
type: DOMAIN
name: GCV_T_N
description: Aminomethyltransferase, folate-binding domain

phrase: WVGVVLKTKGVLRAGQEIDFDNGEKGYITSGSFSPTLKVAIGLAYVPKQADNPVVNIRGKELEVELVKPKFV
type: DOMAIN
name: GCST_C
description: Aminomethyltransferase, C-terminal domain
Protein sequence:
MSFFYRSFANSLLPKQLLRFILARLDLLDSQALDLDNLNFALGRNTVLEFRDVGLILSKLEALTNLPPTFKIQKAKVLLLRITIPVDIYNSPIIVEVEGVDTRIRVASKQEQDEQTAKNKKGTHKDGDEVVPTAADLAQSFLQTEIPTDEQRRLEKALAEEAQEALSESMSDSETDDDGSFATFGTGQGLSLPTFLTNFLQGILDRLQIRIHKVTFQLDMQVPVEPGLSTIELVTFQLALDEVIAEGVTAPGQQKDGSPAIVPREGKRHILLDNLRAFLITEANVFSSLLPTQSAQSLVKPQGPAPHDVPSTLRDMSGSMQSSVGGLDMSISPDQMEALDMLAQSQYEVRDSEDALNIPYESDTQYPEAEENVAGSSPLSTPRASMYQEHDTPMLQDHANSAIMQHQPELWSSYERGIRSEPSLHPPTSFQPQTMPSGAVSPAPSEPSSSASSVRSDDDTPSADTEDLAQSHLYSHEEAESMYMSAFSDAHSTLMPGAYMPGGWGAESEGGESASERDLSTTHPVAGEPQSSTPVVSELASPTPIPEQNPTAQGYEPQHEDTSTPRGITRMVKEIVSLDSISVYVPSTRKQVLAPVTNLAKSNPNLPGAFSVHQSFHSSTTDQSTLLTPENLKEDRQDYAIEIVLKPLTLRFDSSVGFLLAMVVTRLLEAFKGSSDEGAEVKPSSTESILPDIKVCLEQVTMQFLEELTGVADSAKRIYETQKPNFGSDVLLEASLTNLNAFTHQSGSQTEVNVSIEKFAFGYADEAIVSFTGEADLFQSTATVDMLSVGKDIAVKATITPDVTRVDVKTLPLYLKLDLQRLDETFSWFGGLSGFLNMGASEDSVAKAVQIPAKPPQKTRGVRFETPIDPMEKRSGSKIDVRINGVHVDVIGKDCRAVLNTSALKLVHREEAIAAVLKTIRLSGPYVRNSHARAPVVLELDSTRLDYILTPRTRDLERLLELITPSKVKFDEDEDEIMVDTLLRQRRKGGVLGLEVKNFKVRAGNLALLDCIPSLVDDLAKLGTVAKYLPEDDRPGLLTLGQVTNVDCEVDVGGRFGVVNARLTNLELAQITVPSLVAVAVGVVTVNRNENSPIEEELVSTSTAHAPGSSKAPVLMMRMIDDIEPVLKIKLFGLNVDYRVPTIMDVLGLIQEETTPEEFEANLAASVANLGGQATAALRRQDTPESPVVDKEFKPIKLDVAFRDCVVGLNPLGQDSKLAIVLADSHLEAIPGKDSTLDATATLKKACILLIDDVKTLQDVQINARGRAPAMSTPQALELCSKGFVSICEMSSAKAVVKVGKDENGESHVEVSVRDDLLVLETCADSTQTLISLANALTPPTPPSKEIKYRTSVLPVEDLFASITPDAFGRAEGEYDFDDDFAGAQGIECGNEDDDDYYGIGSTEHLEIQSEGYGVAEELFDATNSSLLGDIEVENTNDGMLVSTANLDVPPVSSQSESDLDIQENYFSSEPVKNTTLRWNSRKNLYDQSSDAQVFKSPLVICVRDVHVIWNLYDGYDWVRTREIITKAVQDVEAKAYERKARADRHTYEDEGDEESVVDDCLFNSIYIAVGPNGDPSNLRRAINQELQYQDTTTETESVATTAFTTSTVRASGHRQSRPRGKTLKLSRSKNHKITFELKGVNIDVVTFPPGNETINTIDVRIHDLDVFDHIRTSTWKKFAMYDIDAGERELSKHMVHLEVLNVKPVPDLPATELVVKVNILPLRLHVDQDALDFITRFFEFKDETQPIHQSSSDVPFIQRCEVGDVPVRLDFKPKRVDYAGLRSGHTTEFMNFVILEDSRLVLRHVILYGVSGFDKLGKKLNDIWTADVKSTQLPGVLAGVAPVRSLVNAGSGFKDLIEIPIREYKKDGRIFRSIGKGATAFAKTTGTEVVKLGAKLAIGTQYALQGAEGMLAKNPPNYNHAGPSSSSAGVPAGVDYEVWDEEDFGDHHTPKAISLYADQPLGIMQGMRGAYASLSRDIAIARDAIIAVPTEVMESSSAQGAAKAVLMQAPTILFRPAIGVSKAIGQTLLGATNALDPNHRKRIEAKYKKH

Annotated regions:
Protein sequence:
MGEKPTIAISHLGCEKNRIDTEHMLGLLVKAGYGVDTNEELADYVIVNTCSFIESAREESVRTLVELAEANKKIVITGCMAQHFQTQLLEELPEAVAVVGTGDYHKIVSVIERAEQGERVTLVSAEPTYIADETTPRYRTTTEGVAYLRVAEGCDYRCAFCIIPHLRGNQRSRTIESIVAEAEQLVAQGVQEIILISQITTNYGLDIYGKPKLAELLRALGKINVPWIRMHYAYPTGLTPDVIAAIQETPNVLPYLDLPLQHSHSEVLRSMNRPWQGRVNDEIIERLKIAIPGAVLRTTFIVGFPGETEAQFEHLLQFVQRHEFDHVGVFTFSAEEGTPAYKLPNQLPQEVMDERRDRLMALQQPISWRKNQQEVGKTVEVLIEQENPESGKLIGRSGRFSPEVDGQVYVDGEAKLGTIIPVKIHSADEYDLFGQVVSHN

Annotated regions:
phrase: TTTEGVAYLRVAEGCDYRCAFCIIPHLRGNQRSRTIESIVAEAEQLVAQGVQEIILISQITTNYGLDIYGKPKLAELLRALGKINVPWIRMHYAYPTGLTPDVIAAIQETPNVLPYLDLPLQHSHSEVLRSMNRPWQGRVNDEIIERLKIAIPGAVLRTTFIVGFPGETEAQFEHLLQFVQRHEFDHVGVFTFSAEEGTPAYKLPNQLPQEVMDERRDRLMALQQPISWR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VGKTVEVLIEQENPESGKLIGRSGRFSPEVDGQVYVDGEAKLGTIIPVKIHSADEYDLFGQV
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: VAEGCDYRCAFCIIPHLRGNQRSRTIESIVAEAEQLVAQGVQEIILISQITTNYGLDIYGKPKLAELLRALGKINVPWIRMHYAYPTGLTPDVIAAIQETPNVLPYLDLPLQHSHSEVLRSMNRPWQGRVNDEIIERLKIAIPGAVLRTTFIVGFPGETEAQFEHLLQF
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: PTIAISHLGCEKNRIDTEHMLGLLVKAGYGVDTNEELADYVIVNTCSFIESAREESVRTLVELAEANKKIVITGCMAQHFQTQLLEELPEAVAVVGTGDYHKIVSVIERAE
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: GVAYLRVAEGCDYRCAFCIIPHLRGNQRSRTIESIVAEAEQLVAQGVQEIILISQITTNYGLDIYGKPKLAELLRALGKINVPWIRMHYAYPTGLTPDVIAAIQETPNVLPYLDLPLQHSHSEVLRSMNRPWQGRVNDEIIERLKIAIPGAVLRTTFIVGFPGETEAQFEHLLQFVQRHEFDHVGVFTFSAEEGTPAYKLPNQLPQEVMDERRDRLM
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: QQEVGKTVEVLIEQENPESGKLIGRSGRFSPEVDGQVYVDGEAKLGTIIPVKIHSADEYDLFGQVV
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: IAISHLGCEKNRIDTEHMLGLLVKAGYGVDTNEELADYVIVNTCSFIESAREESVRTLVELAEANKKIVITGCMAQHFQTQLLEELPEAVAVV
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: LRVAEGCDYRCAFCIIPHLR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: EKPTIAISHLGCEKNRIDTEHMLGLLVKAGYGVDTNEELADYVIVNTCSFIESAREESVRTLVELAEANKKIVITGCMAQHFQTQLLEELPEAVAVVGTGDYHKIVSVIERAEQGERVTLVSAEPTYIADETTPRYRTTTEGVAYLRVAEGCDYRCAFCIIPHLRGNQRSRTIESIVAEAEQLVAQGVQEIILISQITTNYGLDIYGKPKLAELLRALGKINVPWIRMHYAYPTGLTPDVIAAIQETPNVLPYLDLPLQHSHSEVLRSMNRPWQGRVNDEIIERLKIAIPGAVLRTTFIVGFPGETEAQFEHLLQFVQRHEFDHVGVFTFSAEEGTPAYKLPNQLPQEVMDERRDRLMALQQPISWRKNQQEVGKTVEVLIEQENPESGKLIGRSGRFSPEVDGQVYVDGEAKLGTIIPVKIHSADEYDLFGQVV
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MSNHLPGVFIVSDSIGETAEMVVRAAASQFNSGNMEIRQVPNISDTETLEEIINQAAASNFIIAYTLVINELADFLKMEARKKGVICVDVLGPVIEAFKSVSDIEPRREPGLLRKVDEMYYRRVEAVEFAVRYDDGKDPRGVMQSDIVLVGVSRTSKTPLSMYLAHKRIKVANVPLVPEVEPPEEIFQVEKGKVIGLVINPEQLNQIRTERLKTLGLKGQASYANLERILEEMEYAQEIMKRLGCPVIDVTNRAVEETASKILEIYYRRLSHV

Annotated regions: