nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MKYHDLRDFLTLLEQQGELKRITLPVDPHLEITEIADRTLRAGGPALLFENPKGYSMPVLCNLFGTPKRVAMGMGQDDVSALRDVGKLLAFLKEPEPPKGFRDLFDKLPQFKQVLNMPTKRLRGAPCQQKIASGDDVDLTRLPIMTCWPDDAAPLITWGLTVTRGPHKERQNLGIYRQQLIDKNKLIMRWLSHRGGALDFQEWLAAHPGERFPISVALGADPATILGAVTPVPDTLSEYAFAGLLRGTKTEVVKCLSNDLEVPASAEIILEGYIEPGEMAPEGPYGDHTGYYNEVDNFPVFTVTHITQREDAIYHSTYTGRPPDEPAVLGVALNEVFVPILQKQFPEIVDFYLPPEGCSYRLAVVTMKKQYAGHAKRVMMGVWSFLRQFMYTKFVIVCDDDVNARDWNDVIWAITTRMDPARDTVLVDNTPIDYLDFASPVSGLGSKMGLDATNKWPGETQREWGRPIVKDPEVTARIDAIWDELAIFK

Annotated regions:
phrase: GAPCQQKIASGDDVDLTRLPIMTCWPDDAAPLITWGLTVTRGPHKERQNLGIYRQQLIDKNKLIMRWLSHRGGALDFQEWLAAHPGERFPISVALGADPATILGAVTPVPDTLSEYAFAGLLRGTKTEVVKCLSNDLEVPASAEIILEGYIEPGEMAPEGPYGDHTGYYNEVDNFPVFTVTHITQREDAIYHSTYTGR
type: DOMAIN
name: UbiD_Rift_dom
description: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase-like, Rift-related domain

phrase: VLGVALNEVFVPILQKQFPEIVDFYLPPEGCSYRLAVVTMKKQYAGHAKRVMMGVWSFLRQFMYTKFVIVCDDDVNARDWNDVIWAITTRMDPARDTVLVDNTPIDYLDFASPVSGLGSKMGLD
type: DOMAIN
name: UbiD-like_C
description: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase-like, C-terminal domain

phrase: LTLLEQQGELKRITLPVDPHLEITEIADRTLRAGGPALLFENPKGYSMPVLCNLFGTPKRVAMGMGQDDVSALRDVGKL
type: DOMAIN
name: UbiD-like_N
description: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase-like, N-terminal domain
Protein sequence:
MAGTRWVLGALLRGCGCNCSSCRRTGAACLPFYSAAGTFPSGVSGRRRLLLLLGAAAAAASQTRGLQLGPAAAGRLAGPIPARPSAAAAAAASYSALRAPLFPRSLAAAAGPARGYSQESKTTYLEDLPPLPEYELSPSKLGDEVDDVYLIRAQGLPWSCTVEDVLNFFSDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMKSLQVKPSPVLSDGVVRLRGLPYSCNEKDIVDFFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSRRNEVRTHVGSHKGKKMTSSPPTKYITEPEVVFEEHEVNEDIRPMTAFESDKEIELPKEMSEKLPEAVDFGTLPSLHFVHMRGLPFQANAQDIINFFAPLKPVRITMEYSSSGKATGEADVHFDTHEDAVAAMLKDRSHVQHRYIELFLNSCPKGK

Annotated regions:
phrase: GVVRLRGLPYSCNEKDIVDFFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPSR
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: VYLIRAQGLPWSCTVEDVLNFFSDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYE
type: DOMAIN
name: GRSF1_RRM1
description: GRSF-1, RNA recognition motif 1

phrase: YLIRAQGLPWSCTVEDVLNFFSDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEVYEINNEDVDALMKSLQVKPSP
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: RLRGLPYSCNEKDIVDFFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRY
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: HFVHMRGLPFQANAQDIINFFAPLKPVRITMEYSSSGKATGEADVHFDTHEDAVAAMLKDRSHVQHRYIELFLN
type: DOMAIN
name: GRSF1_RRM3
description: GRSF-1, RNA recognition motif 3

phrase: HFVHMRGLPFQANAQDIINFFAPLKPVRITMEYSSSGKATGEADVHFDTHEDAVAAMLKDRSHVQHRYIELFLNSCPKG
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: LIRAQGLPWSCTVEDVLNFFSDCRIRNSENGIHFLLNRDGKRRGDALIEMESEQDVQKALEKHRMYMGQRYVEV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: VVRLRGLPYSCNEKDIVDFFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEI
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: FVHMRGLPFQANAQDIINFFAPLKPVRITMEYSSSGKATGEADVHFDTHEDAVAAMLKDRSHVQHRYIEL
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: DGVVRLRGLPYSCNEKDIVDFFAGLNIVDITFVMDYRGRRKTGEAYVQFEEPEMANQALLKHREEIGNRYIEIFPS
type: DOMAIN
name: GRSF-1_RRM2
description: GRSF-1, RNA recognition motif 2
Protein sequence:
MLNEVGKINIKGINHLLFSVSNLEKSIEFYEKVFHAQLLVKGQKTAYFDLNGLWLALNLEADIPRNEIHKSYTHMAFTIDPKDFDAIHHRLKNLNVNILNGRPRDKQDQKSIYFTDPDGHKFEFHTGTLQDRLSYYKKDKPHMKFYI

Annotated regions:
phrase: GINHLLFSVSNLEKSIEFYEKVFHAQLLVKGQKTAYFDLNGLWLALNLEADIPRNEIHKSYTHMAFTIDPKDFDAIHHRLKNLNVNILNGRPRDKQDQKSIYFTDPDGHKFEFHT
type: DOMAIN
name: VOC
description: Vicinal oxygen chelate (VOC) domain

phrase: GINHLLFSVSNLEKSIEFYEKVFHAQLLVKGQKTAYFDLNGLWLALNLEADIPRNEIHKSYTHMAFTIDPKDFDAIHHRLKNLNVNILNGRPRDKQDQKSIYFTDPDGHKFE
type: DOMAIN
name: Glyas_Fos-R_dOase_dom
description: Glyoxalase/fosfomycin resistance/dioxygenase domain
Protein sequence:
MIFSTLEHILTHISFSVVSIVITIHFLTLFLLVDEVVGLYDSSEKGMIVTFFCITGLLVTRWIYSGHFPLSDLYESLIFLSWGFSLIHMVSYLKFKKRKNNLSAITAPRAIFTQGFATSGLLTKMHQSAILAPALQSQWLMMHVSMMVLGYAALLCGSLLSVALLVITFRKAIKIIGENNNFSFSFGKIQYMNERSNVLLNTYFLSSKNYYRYQLTQQLDRWSYRIISLGFIFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTVFAIYFHTRTNTNLEGVNSALVASMGFLIIWICYFGVNLLGIGLHSYGSFTLN

Annotated regions:
phrase: LSDLYESLIFLSWGFSLIHMVSYLKFKKRKNNLSAITAPRAIFTQGFATSGLLTKMHQSAILAPALQSQWLMMHVSMMVLGYAALLCGSLLSVALLVITFRKAIKIIGENNNFSFSFGKIQYMNERSNVLLNTYFLSSKNYYRYQLTQQLDRWSYRIISLGFIFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTVFAIYFHTRTNTNLEGVNSALVASMGFLIIWICYFGVNLLGIGL
type: DOMAIN
name: Cyt_c_assembly
description: Cytochrome c assembly protein
Protein sequence:
MDPRSEVLLRQAELFQGSLLLVGLPADDLLGKLPDARGWCWHAGDQAALDARFEGRVDFGVEAPQTGFEAAVLFLPKARDLTDYLLNALASRLAGRELFLVGEKRGGIEAAAKQLSPFGRARKLDSARHCQLWQVTVEHAPQAVSLDSLARPYQIELQDGPLTVVSLPGVFSHGRLDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAIKRRYPHNEVIMLDVDAFATASSRLTLAANGLQAQVLTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATENLLRKARQHLKSGGELRLVANNFLRYQPLIEEHVGQCEVRAQGNGFKIYSAKRP

Annotated regions:
phrase: LTVVSLPGVFSHGRLDRGSALLLENIDKLPSGNLLDFGCGAGVLGAAIKRRYPHNEVIMLDVDAFATASSRLTLAANGLQAQVLTGDGIDAAPMGLNTILSNPPFHVGVHTDYMATENLLRKARQHLKSGGELRLVANNFLRYQPLIEEHVGQCEVRAQGNGFKI
type: DOMAIN
name: Small_mtfrase_dom
description: Methyltransferase small domain

phrase: SEVLLRQAELFQGSLLLVGLPADDLLGKLPDARGWCWHAGDQAALDARFEGRVDFGVEAPQTGFEAAVLFLPKARDLTDYLLNALASRLAGRELFLVGEKRGGIEAAAKQLSPFGRARKLDSARHCQLWQVTVEHAPQAVSLDSLARP
type: DOMAIN
name: Mtase_sm_N
description: Methyltransferase small, N-terminal
Protein sequence:
MAKFIMVVGTSSNSGKTVLVSGICRMLSNKGYKVAPFKSQNMSLNSRVSIEDGEIAVAQYTQAMAARAEPSVHFNPILLKPKGNFISQVIVHGTPYEDRDYNEYRSNKDDMLEKIKESIDYLDTNYDYVVIEGAGSCCEINLLKDDIANLRIAEISGADAILVSDIDRGGVFAAIYGTVQLLPENWRKLLKGFVINKFRGNIDVLKDGFEKIEELTNIPVIGTIPYDETLILPEEDSQALEGKRVFGNLKSPIEVNIVKFSKIANFTDVDPLSSDCLMRYLDFNDDITGDILILPGTRCSTVEMDLMKKHGMDKKIMEFIERGGIILGICGGYQTLGKMLIDENFSEGDVGTISGLGLFDMETTFGNKKAIKNSTGKISIFDQNFDVAGYELHEGYSVSNETPLISLSRGFGNCGNSYDGSFKVVGNSYIFGTYFHGILENFEFRNYLVNIVNNRKNLSKIENDNYAEIFNKNMDKLSKLIEESLDLSKIIK

Annotated regions:
phrase: KFIMVVGTSSNSGKTVLVSGICRMLSNKGYKVAPFKSQNMSLNSRVSIEDGEIAVAQYTQAMAARAEPSVHFNPILLKPKGNFISQVIVHGTPYEDRDYNEYRSNKDDMLEKIKESIDYLDTNYDYVVIEGAGSCCEINLLKDDIANLRIAEISGADAILVSDIDRGGVFAAIYGTVQLLPENWRKLLKGFVINKFRGNIDVLKDGFEKIEELTNIPVIGTI
type: DOMAIN
name: CobQ_N
description: Cobyric acid synthase, N-terminal domain

phrase: VNIVKFSKIANFTDVDPLSSDCLMRYLDFNDDITGDILILPGTRCSTVEMDLMKKHGMDKKIMEFIERGGIILGICGGYQTLGKMLIDENFSEGDVGTISGLGLFDMETTFGNKKAIKNSTGKISIFDQNFDVAGYELHEGYSVSNETPLISLSRGFGNCGNSYDGSFKVVGNSYIFGTYFHGILENFEFRNYL
type: DOMAIN
name: CobQ_GATase1
description: Cobyric acid synthase, glutamine amidotransferase type 1

phrase: IMVVGTSSNSGKTVLVSGICRMLSNKGYKVAPFKSQNMSLNSRVSIEDGEIAVAQYTQAMAARAEPSVHFNPILLKPKGNFISQVIVHGTPYEDRDYNEYRSNKDDMLEKIKESIDYLDTNYDYVVIEGAGSCCEINLLKDDIANLRIAEISGADAILVSDIDRGGVFAAIYGTVQLLPENWRKLLKGFVINKFRGNIDVLKDGFEKIEELTNIPVIGTIPYDETLI
type: DOMAIN
name: CobQ/CobB/MinD/ParA_Nub-bd_dom
description: CobQ/CobB/MinD/ParA nucleotide binding domain

phrase: VNIVKFSKIANFTDVDPLSSDCLMRYLDFNDDITGDILILPGTRCSTVEMDLMKKHGMDKKIMEFIERGGIILGICGGYQTLGKMLIDENFSEGDVGTISGLGLFDMETTFGNKKAIKNSTGKISIFDQNFDVAGYELHEGYSVSNETPLISLSRGFGNCGNSYDGSFKVVGNSYIFGTYFHGILENF
type: DOMAIN
name: GATase_3
description: CobB/CobQ-like glutamine amidotransferase
Protein sequence:
MKFAVFASLLASAAAFAPAQQSARTSVATNMAFESELGAQPPLGFFDPLGLVADGDQEKFDRLRYVELKHGRISMLAVVGYLVQENGIRLPGDIDYSGTSFASIPNGFAALSTISTAGIAQIVAFIGFLEIAVMKDITGGEFPGDFRNDYIDFGWDSFDEETQFKKRAIELNQGRAAQMGILALMVHEKLGVSLIPN

Annotated regions:
Protein sequence:
MEKAIVLLSAGLDSTVSLAYGVRNFQVVLGLTFNYGQKASRKEIEHSKKILDYYGIPQEVIELPFLKKITKTSLVAEDQEIPTGIDLESAAAVKTSMEKVWVPNRNGLFINIAAAYAESLGAKYIITGFNAEEAKTFSDNSREFVDAVNHALKYSTLNHVQVVSFTQNLEKSEIYRLGVELGAPLDLIWSCYYGGDEMCGVCESCLRLKRARGGN

Annotated regions:
Protein sequence:
MRIGILGGTFDPIHFGHIRPALEVRDKLNLDRVWLMPNHIPPHKASTCVSTEQRLEMVQLVCDQYDEFDLCDIEAKRDTPSYLVTTLKQLRDEHPNDEFYFIMGMDSLVSLPTWYEWRSIFTLCHIVVSERHGWCLNPDSAIYEEYEHRLTSTNQIPSQSTGLIIPIEIAPQPYSSTEIRHQLFNGIIPENALPSKIIKFIQHNSLYQAPA

Annotated regions:
phrase: ILGGTFDPIHFGHIRPALEVRDKLNLDRVWLMPNHIPPHKASTCVSTEQRLEMVQLVCDQYDEFDLCDIEAKRDTPSYLVTTLKQLRDEHPNDEFYFIMGMDSLVSLPTWYEWRSIFTLCHIVVSERHGWCLNPDSAIYEEYEHRLTSTNQIPSQSTGLIIPIEIAPQPYSSTEIR
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: IGILGGTFDPIHFGHIRPALEVRDKLNLDRVWLMPNHIPPHKASTCVSTEQRLEMVQL
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain
Protein sequence:
MSPESRKLLNIIILGIGFMFMFTAFQTSGNVAQTVISSLNSTSFHGSGYTSLAIIYSVFSASNLIAPSIVAVIGCQMSMFLSGLLYSAYIAMFIQPYTWSFYTLSVLIGIAAAVLWTAQGSCLTINSDDTTIGKHSGIFWALLQFSMLFGNLFIYLAWKGEINISDSDRRTVFIALTVISLVGSVLFFLIRTPESDDAQEDDISNSAADAEGTMSAQSCFAKAIDAFKRSLKLSITKEMLLLSILVAYTGLELTFYSGVYGTCIGSMKVFEADAKSLIGLSGIFVGLGEVLGGGLFGLLGKYNYFGRNPVVILGVVVHFLAFYMIYLYMPSDAPIASREGTYLRAFINPSKTIALACSFLLGLGDSCYNTQMLSILGSLYPDNSAPAFAVFKFVQSVSAAVAFFYSNYLLLHWQLLILVIFGFFGTISFFFVEWGLTRRSQYNSM

Annotated regions:
Protein sequence:
MWLRCPHCHQLLFAKQLTQYAVCPNCDYGLRIPARHRLSWLVDSFKEFDKDLQTKNPLHFPGYQEKISKLQRQTKLNDSVLTGEASINDQLFSLGIMDPTFIMGSLGTVTGEKITRLFEYATTHRQAVVLFTASGGARMQEGIMSLMQMAKVSQAINEHAAAGLLYIVVLTDPTTGGVTASFAMDGDIILAEPHALVGFAGRRVIEQTIHQQIPIDLQSAENILHHGFIDRIVKRQDEKKLLEWLLKTGSVANE

Annotated regions:
phrase: WLRCPHCHQLLFAKQLTQYAVCPN
type: DOMAIN
name: Znf-ACC
description: Acetyl-coA carboxylase zinc finger domain

phrase: MWLRCPHCHQLLFAKQLTQYAVCPNCDYGLRIPARHRLSWLVDSFKEFDKDLQTKNPLHFPGYQEKISKLQRQTKLNDSVLTGEASINDQLFSLGIMDPTFIMGSLGTVTGEKITRLFEYATTHRQAVVLFTASGGARMQEGIMSLMQMAKVSQAINEHAAAGLLYIVVLTDPTTGGVTASFAMDGDIILAEPHALVGFAGRRVIEQTIHQQIPIDLQSAENILHHGFIDRIVKRQDEKKLLEWLLKTGSVAN
type: DOMAIN
name: COA_CT_N
description: Acetyl-coenzyme A carboxyltransferase, N-terminal

phrase: KISKLQRQTKLNDSVLTGEASINDQLFSLGIMDPTFIMGSLGTVTGEKITRLFEYATTHRQAVVLFTASGGARMQEGIMSLMQMAKVSQAINEHAAAGLLYIVVLTDPTTGGVTASFAMDGDIILAEPHALVGFAGRRVIEQTIHQQIPIDL
type: DOMAIN
name: AcCoA_carboxyl_beta
description: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta
Protein sequence:
MFDFEQQLKILPDKPGVYLMKNSLGEVIYVGKAKILKNRVRQYFQKSKNHSEKVRTMVKHISEFEYIVTDSEMEALVLECNLIKKYRPRYNILLKDDKIYPLIKITLNEDFPRIICARNKIKDGAKYFGPYISTGAVYETMEVIKKIFPIRDCKLNIKKGNVKVRPCLNYHIGLCKAPCTGHISKEEYGKIISGVMDFLSGKNKDIIRKLKEDMDTLSENMEFEKAAELRDKIFALEKIIEKQKITTGGFEDEDFINIHSDEKDSCIQVFFSRTGKIIGREHFIIEDTQDLPKGEIVANFIKEFYGGTAYIAKTIYVPEIYDVQLLEDWLSIKKDSKVYIKIPQKGDKKAILNLVEKNARTTLQNFKLKFIQDKKMYETSLEELMEILNLDDIPHRIEAYDVSNIQGVDSVGTMVVFENGRPKHNDYRRFKINEVKGANDYESMKEILRRRFQNGMEEIKRIKERKLEFSAGKFSFFPDLILMDGGKIQVSAALEVLKEFNIDITVCGMVKDDKHRTRGLIYRNEEMPLNRNSNIIKLITRIQDEVHRFAVTYHRSLRSKRVLHSVLEDIPNVGVKRRKELLKRFLSVENIKKASMEELISTPSIDMRTAESIISYFRGYKS

Annotated regions:
phrase: KDIIRKLKEDMDTLSENMEFEKAAELRDKIFALEK
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: KPGVYLMKNSLGEVIYVGKAKILKNRVRQYFQKSKNHSEKVRTMVKHISEFEYIVTDSEMEALVLECNLIKKYRPRYNILLK
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: IPNVGVKRRKELLKRFLSVENIKKASMEELISTPSIDMRTAESIISYF
type: DOMAIN
name: DisA/LigA_HHH
description: DisA/LigA, helix-hairpin-helix motif

phrase: DIIRKLKEDMDTLSENMEFEKAAELRDKIFALE
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: EILNLDDIPHRIEAYDVSNIQGVDSVGTMVVFENGRPKHNDYRRFKINEVKGANDYESMKEILRRRFQNGMEEIKRIKERKLEFSAGKFSFFPDLILMDGGKIQVSAALEVLKEFNIDITVCGMVKDDKHRTRGLIYRNEEMPLNRNSNIIKLITRIQDEVHRFA
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: LPDKPGVYLMKNSLGEVIYVGKAKILKNRVRQYFQKSKNHSEKVRTMVKHISEFEYIVTDSEMEALVLECNLIKKYRPRYN
type: DOMAIN
name: GIY-YIG_UvrC_Cho
description: UvrC/Cho-like, GIY-YIG domain

phrase: FINIHSDEKDSCIQVFFSRTGKIIGREHFIIEDTQDLPKGEIVANFIKEFYGGTAYIAKTIYVPEIYDVQLLEDWLSIKKDSKVYIKIPQKGDKKAILNLVEKNARTTLQNFKLKFIQDKKMYETSLEELMEILNLDDIPHRIEAYDVSNIQGVDSVGTMVVFENGRPKHNDYRRFKINEVKGANDYESMKEILRRRFQNGMEEIKRIKERKLEFSAGKFSFFPDLILMDGGKIQVSAALEV
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: DKPGVYLMKNSLGEVIYVGKAKILKNRVRQYFQKSKNHSEKVRTMVKHISEFEYIVTDSEMEALVLECNLIKKYRPRYN
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: PGVYLMKNSLGEVIYVGKAKILKNRVRQYFQKSKNHSEKVRTMVKHISEFEYIVTDSEMEALVLECNLIKKYRPRY
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease
Protein sequence:
MAISSSSSSICFNPTRFHTARHISSPSRLFPVTSFSPRSLRFSDRRSLLSSSASRLRLSPLCVRDSRAAEVTQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLPVAEEYEIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIERVLNS

Annotated regions:
phrase: LVEFYTSWCGPCRMVHRI
type: CONSERVED_SITE
name: Thioredoxin_CS
description: Thioredoxin, conserved site

phrase: SLLSSSASRLRLSPLCVRDSRAAEVTQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLPVAEEYEIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIERVLN
type: DOMAIN
name: Thioredoxin_domain
description: Thioredoxin domain

phrase: AEVTQRSWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLPVAEEYEIKAVPVVLLFKNGEKRESIMGTMPKEFYISA
type: DOMAIN
name: Thioredoxin_domain
description: Thioredoxin domain
Protein sequence:
MKRNFDDFKQFIKCKKIGVVGIGISNKPLIDFLLKLGARVSAFDKKSPDEIGEVARELKEKNVDLVLGEKYLNDLSDFDIIFKTPSMRIDSPAFVKAKEKGAYITSEMEEFIRYCPAKIYGVTGSDGKTTTTTLMYNILKKQGYKSWIGGNIGTPLFSEVEEITPDDRVVIELSSFQLMTMNISPEVAVITNVSPNHLDIHKDMEEYIMAKKNIFKYQSNSDLLVLNKDNELTNSMTGEALGKVRQFSIKEKLNKGGYLNKDSLCIDGDEVCKLSEIKLKGMHNVENLLAAFCALKDDVNIESMREIATTFSGVEHRCEFVREINGVKYYNDSIASSPTRTLAGLKAFEKPVILIAGGYDKKIPFDILAEEGYSKIKTLVLMGATKYKIKEAFENLELKKHVHIPIIMANSLVEAVNSARKVSCRGDVVTLSPACASFDMFANFEIRGNMFKEIVNDM

Annotated regions:
phrase: VTGSDGKTTTTTLMYNILKKQGYKSWIGGNIGTPLFSEVEEITPDDRVVIELSSFQLMTMNISPEVAVITNVSPNHLDIHKDMEEYIMAKKNIFKYQSNSDLLVLNKDNELTNSMTGEALGKVRQFSIKEKLNKGGYLNKDSLCIDGDEVCKLSEIKLKGMHNVENLLAAFC
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: HRCEFVREINGVKYYNDSIASSPTRTLAGLKAFEKPVILIAGGYDKKIPFDILAEEGYSKIKTLVLMGATKYKIKEAFENLELKKHVHIPIIMANSLVEAVNSARKVSCRGDVVTLSPA
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MFLYNITLQRATGISHAIHGNFSGTKQQEIVVSRGKILELLRPDANTGKVHTLLTMEVFGVVRSLMAFRLTGGTKDYVVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQFLAVDPKGRAVMIGATEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENPMFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPGGSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFFFLAQTEQGDIFKVTLETDEEMVTEIRMKYFDTIPVATAMCVLKTGFLFVSSEFGNHYLYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDEQESLSPIMSCQIADLANEDTPQLYVACGRGPRSTLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVNATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPGKKTIIRCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGVEKQDELGEKGTIGFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYTPRKFVIHPETNNLILIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLNENLPEAIFGAPKAGSGQWASLVRLINPIQGNTLDLVQLEQNEAAFSVAICRFLNGGDDWYVLVGVARDMILNPRSVGGGYIYTYRIVGGGDKLEFLHKTPVEDVPLAIAPFQGRVLVGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGIHTIGQRVIVSDVQESLFWVRYRRNENQLIIFADDTYPRWITTACLLDYDTMASADKFGNICVVRLPPNTSDDVDEDPTGNKALWDRGLLNGASQKAEIIINYHIGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMDPHKQKSVSEELDRTPPEVSKKLEDIRTRYAF

Annotated regions:
phrase: ISHAIHGNFSGTKQQEIVVSRGKILELLRPDANTGKVHTLLTMEVFGVVRSLMAFRLTGGTKDYVVVGSDSGRIVILEYHPSKNMFEKIHQETFGKSGCRRIVPGQFLAVDPKGRAVMIGATEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENPMFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEALEEHGNFLITVPGGSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFFFLAQTEQGDIFKVTLETDEEMVTEIRMKYFDTIPVATAMCVLKTGFLFVSSEFGNHYLYQIAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVD
type: DOMAIN
name: Beta-prop_RSE1/DDB1/CPSF1_1st
description: RSE1/DDB1/CPSF1, first beta-propeller domain

phrase: SLVRLINPIQGNTLDLVQLEQNEAAFSVAICRFLNGGDDWYVLVGVARDMILNPRSVGGGYIYTYRIVGGGDKLEFLHKTPVEDVPLAIAPFQGRVLVGVGKLLRIYDLGKKKLLRKCENKHVPNLVTGIHTIGQRVIVSDVQESLFWVRYRRNENQLIIFADDTYPRWITTACLLDYDTMASADKFGNICVVRLPPNTSDDVDEDPTGNKALWDRGLLNGASQKAEIIINYHIGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDFFQHLEMHMRSEFPPLCGRDHLSFRSYYFPVKNVIDGDLCEQF
type: DOMAIN
name: Cleavage/polyA-sp_fac_asu_C
description: Cleavage/polyadenylation specificity factor, A subunit, C-terminal
Protein sequence:
MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNLK

Annotated regions:
phrase: TNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEW
type: DOMAIN
name: Cyt_c_oxase_su1_dom
description: Cytochrome c oxidase subunit I domain

phrase: MFINRWLFSTNHKDIGTLYLLFGAWAGMVGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMPIMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSFLLLLASSMVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAMSQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGNIKWSPAMMWALGFIFLFTVGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLNDTWAKIHFAIMFVGVNMTFFPQHFLGLSGMPRRYSDYPDAYTMWNTISSMGSFISLTAVMLMIFIIWEAFASKREVLTVDLTTTNLEWLNGCPPPYHTFEEPTYVNL
type: DOMAIN
name: Cyt_c_oxase-like_su1_dom
description: Cytochrome c oxidase-like, subunit I domain

phrase: WFFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAH
type: BINDING_SITE
name: Cyt_c_Oxase_su1_BS
description: Cytochrome c oxidase, subunit I, copper-binding site
Protein sequence:
MAHAQELTPEALAGLRERYRRERERRVRPDGTRQYLGADAEFGFYAADPWAGESDVREPVRDRVDVAVVGGGFGGVLAGARLRQQGVARVRVVEKGGDFGGTWYWNRYPGIHCDIEAHVYLPMLDETGYVPEWKYAPGEEIRRHAMRIAETFDLYTDVLFSTAVTSLSWDDTTGEWIVETDRHDAFRATYVITATGVLSELKLPGIPGIERFKGHTFHTSRWDYAYTGGGPDGGLTGLADKRVGVVGTGATGVQVIPKLAEDAGQLHVFQRTPSSVDVRANRRTTARDVGADRAGWASERRDNFLRVVSGEAVEEDLVADRWTATAGLLEKLLPSFRRPDDLAAFEAAYEVADAARMNDIRARVDDLVTDPATADRLKPWYRYACKRPTFSDLYLQAFNRDNVTLVDTADTHGIERMNERGVVVGDTEYPLDCLVFATGFSVGVSGVHSGRLPVRGRGGVRLRDAWSARGPRTLHGLTSNGFPNLIQLGGVQSASSVNHTHVLDEHAVHGAALVAAAEAKGAVVEPTREAEDAWIATLAEHAPDHAWFHAECTPGYYNAEGRGRPNGPTAYPHGAAAFHELLRRWREESMDELLAPRARVRAC

Annotated regions:
Protein sequence:
MTIARLNKPDFPANAGTKEYAASLDAADPLAYLRDKFIIPSKANINCKKLAKPGLSSEPCIYFCGNSLGIQPKATANYMEAQLDTWSSIAVGGHFTDLEGSPLRQWQLLSEQAAESMCKIVGAQPDEVAAMGTLTANLHLLLASFYKPTEMKHKILMDWKAFPSDHYAIESHIAWHGLNPENSMVLIGPEEGEYEISTEKILSYIDEHAESAALILLPGIQYYTGQLFDIPKITAYAQSRNLVVGWDLAHAYANAELKLHGWNVDFAAWCTYKYGNAGPGAMAGLFVHERHGRVDYSEGEDSPRFRHRLTGWYGGDRSVRFKMDNKFKPIPGAGGFQISNPSAIDLACLCASLSVFDETSMAELRKKSVKLTAYLEHLLLKDTSEKTRPFCIITPTDPEARGAQLSLLLKPGLLQNVSKKLQEGGIVCDKREPGVVRVAPTPLYNTFTDVWMFVDYFKSALNETHNGSNGTC

Annotated regions:
Protein sequence:
MLVPMVIEQTSRGERAYDIYSRLLRDNIIFLGTPIDDNVANLIIAQMLFLEAEDPEKDISLYINSPGGSITAGMAIYDTMQFIRPDVATICIGQCASMGATLLASGAPGKRYALPTSRILIHQPLMSGLSGQATDIDIHAREILRMREITNQLLAKHCNQRLEKVEKDVERDFIMNAQQAKEYGLVDDIIYKHK

Annotated regions:
phrase: RYALPTSRILIHQ
type: ACTIVE_SITE
name: ClpP_His_AS
description: ClpP, histidine active site
Protein sequence:
MKVKGIQRNYQHLWRWGTMLLGMLMICSAAEQLWVTVYYGVPVWKEATTTLFCASDAKSYKAEAHNIWATHACVPTDPNPREIILTNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTEWKNNNVTNNNATNVTNEDTGMRNCSFNITTEVRDKKKQVHALFYKLDVVQIDDDNSTNTSYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCNDKEFNGTGACKNVSTVQCTHGIRPVVSTQLLLNGSLAEKEIIIRSENITNNAKIIIVQLNESVTINCTRPYQTTRRRTPIGLGQAVYTSKIAGYAGPAYCNINGIAWNKTLQQVAKKLGDLLNRTTILFQPPSGGDPEITTHTFNCGGEFSYCNTSKLFNSTWRNNNTSNSTGVNSTGENEIIKLPCRIKQIVNMWQGVGKAMYAPPIEGLINCSSNITGLLLTRDGGANNSQNETFRPGGGDMRDNWRSELYKYKVVKLEPLGLAPTRAKRRVVEREKRAIGLGAMFLGFLGAAGSTMGAASLTLTVQARQLMSGIVQQQDNLLRAIEAQQHLLQLTVWGIKQLQARILAVESYLKDQQLLGIWGCSGKHICTTTVPWNSSWSNKSLDDIWNNMTWIEWEKEIDKYTGVIYNLIEESQTQQEKNEQELLELDNWASLWNWFSITKWLWYIKIFIMIVGGLIGLRIVFAVFSLVNRVRQGYSPLSFQTLLPAPRGPDRPEGIEEEGGERGRDRSIRLVNGFSALIWDDLRNLCLFGY

Annotated regions:
phrase: VQARQLMSGIVQQQDNLLRAIEAQQHLLQLTVWGIKQLQARILAVESYLKDQQLLGIWGCSGKHICTTTVPWNSSWSNKSLDDIWNNMTWIEWEKEIDKYTGVIYNLIEESQTQQEKNEQELLEL
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASLTLTVQARQLMSGIVQQQDNLLRAIEAQQHLLQLTVWGIKQLQARILAVESYLKDQQLLGIWGCSGKHICTTTVPWNSSWSNKSLDDIWNNMTWIEWEKEIDKYTGVIYNLIEESQTQQEKNEQELLELDNWASLWNWFSITKWLWYIKIFIMIVGGLIGLRIVFAVFSLVNRVRQGYSPLSFQT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKEATTTLFCASDAKSYKAEAHNIWATHACVPTDPNPREIILTNVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTEWKNNNVTNNNATNVTNEDTGMRNCSFNITTEVRDKKKQVHALFYKLDVVQIDDDNSTNTSYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCNDKEFNGTGACKNVSTVQCTHGIRPVVSTQLLLNGSLAEKEIIIRSENITNNAKIIIVQLNESVTINCTRPYQTTRRRTPIGLGQAVYTSKIAGYAGPAYCNINGIAWNKTLQQVAKKLGDLLNRTTILFQPPSGGDPEITTHTFNCGGEFSYCNTSKLFNSTWRNNNTSNSTGVNSTGENEIIKLPCRIKQIVNMWQGVGKAMYAPPIEGLINCSSNITGLLLTRDGGANNSQNETFRPGGGDMRDNWRSELYKYKVVKLEPLGLAPTRAKRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MKTYNINKRINTLLLLVITMLSFSGCDLEPQEKFRFDPEVDPQFTFGSMTTWEWLQTNPNDEFGFMIEAIKQTGLQDMYNSKTETYTFFLMKDPNWTNNGPGFFSREFNLKNTADRDPKEVFEDPAVDLDIVRNYLLYLTLPIYVDQGPDHLKTLDLPYTFETLSEDVNNQIMTIARDWNYVMQINDSPDLPTGNLGKINVPVGYHNYIFSNGNSVAHIFGLNNNGKMARRYKFGEPKMDF

Annotated regions:
Protein sequence:
MFRPPSIKDAKKIWELIGRCKPLDINSPYCYALIGRDFFDSSIVYEEEGRIKGVVIGYLRPRAPERLFVWQVAIEAKSRGKGIAKRAIEAILKNLERKGHCIQAIEATYTPSNLASKALFHALGREWKVVWIEENFLEGALLSAQEAHEEEWLITLPFSSEALGVQGANHANL

Annotated regions:
phrase: MFRPPSIKDAKKIWELIGRCKPLDINSPYCYALIGRDFFDSSIVYEEEGRIKGVVIGYLRPRAPERLFVWQVAIEAKSRGKGIAKRAIEAILKNLERKGHCIQAIEATYTPSNLASKALFHALGREWKVVWIEENFLEGALLSAQEA
type: DOMAIN
name: GNAT_dom
description: GNAT domain

phrase: RDFFDSSIVYEEEGRIKGVVIGYLRPRAPERLFVWQVAIEAKSRGKGIAKRAIEAILKNLERKGHCIQAIEATYTPSNLASKALFHAL
type: DOMAIN
name: GNAT_dom
description: GNAT domain
Protein sequence:
MREKYRQERDKRSVGRTYQFARGDFSRYARDPYTERQEREPLTDEVDVAVVGAGIGGLLTGAHLRKETGLERIRLIDGAGDVGGTWYWNRFPGVRCDVESYIYMPLLEETGTIPREKYSTGPEIFAHLQQIAHRYDLYRDALFQTTVTELRWDEAAGRWLVSTDRGDLIRARYVAMSIGLMHRPKLPGLPGLETFAGHSFHTSRWDFDYTGGDSTGGLTKLKDKKVGVIGTGSTTIQLAPHLAEWAEQLILFQRTPAAVDVRGNRPTPPEWAAGLAPGWQQRRMENFHALTSGVPQDEDLVQDRWTQTTAKLAAAILPTGDTGGDPKERALAAERADFLKMEELRARIDSVVTDPATAAALKPYYRVYCKRPCFHDGYLQTFNRPNVTLVDTQGQGVERLTPAGVVANGREYPLDCLIFATGYEHEFAVPYTERAGYDIVGRDGLRLSEKWADGARTLHGLQVNGFPNCFILSKVQAGRHVNIAYMLGEQTRHLAHIVKCVEERGHQVVEASEAGEKEWVEEILRLATNDIDFLENCTPGLYNNEGDPSGLPLLNSSYGGGSVEFVNILRRWREAGDLAGLELR

Annotated regions: