nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MLTSNLGYPRIGENREWKKALESFWANDTTEEQLLATMKELRLNHLRVQQEQEVDLIPVGDFTLYDHVLDMAVMFGIIPKRFLQQGDTPTLSTYFAMARGSKNAQACEMTKWYNTNYHYIVPELHDAAPRLTKNAPLEAYLEAKNELGIDGKPVILGPYSFVKLAKGYEEDKLQETIQSLLPLYIQVIQELVDAGARSIQVDEPSLVTSISAREMALVTRIYEQINEAIADAPLFLQTYFDAVTFYEEVVSLPVKGIGLDFVHGGAKNLEALRTFGFPEDKVLAAGIIDGRNIWISNLRERHELVHQLEQHVAKDRLVLQPSCSLLHVPVTTKREEKLDPTLLGVLAFANEKLTELHTLKQLAAGNEAEVKEALEANDDALAALEKSGWRSGAATSHNLENKKRPQSFNERRPLQEEKWQLPLLPTTTIGSFPQTKDVRRTRSLWRKGELSTVEYERTMKSYIEKWINIQEELGLDVLVHGEFERNDMVEFFGEKLDGFAFTANGWVQSYGSRCVKPPIIYGNVSFTEPMTVAETVYAQSLTDKPVKGMLTGPVTILNWSFVRDDLPLTVIAHQIAEALTHEVTALEEAGIEMIQIDEPAIREGLPLKAEDQQEYLDWAVSAFRASCAHVKATTQIHTHMCYSEFHEMIEAIDDLDADVISIETSRSHGEMISAFEKTTYEKGIGLGVYDIHSPRVPSEEEMLNVIRRALTVLPASLFWVNPDCGLKTRAEKETVAALKNMVAAARAAREELKTKA

Annotated regions:
phrase: TSNLGYPRIGENREWKKALESFWANDTTEEQLLATMKELRLNHLRVQQEQEVDLIPVGDFTLYDHVLDMAVMFGIIPKRFLQQGDTPTLSTYFAMARGSKNAQACEMTKWYNTNYHYIVPELHDAAPRLTKNAPLEAYLEAKNELGIDGKPVILGPYSFVKLAKGYEEDKLQETIQSLLPLYIQVIQELVDAGARSIQVDEPSLVTSISAREMALVTRIYEQINEAIADAPLFLQTYFDAVTFYEEVVSLPVKGIGLDFVHGGAKNLEALRTFGFPEDKVLAAGIIDGRNIWISNLRERHELVHQLEQH
type: DOMAIN
name: Cbl-indep_Met_Synth_N
description: Cobalamin-independent methionine synthase MetE, N-terminal

phrase: LPTTTIGSFPQTKDVRRTRSLWRKGELSTVEYERTMKSYIEKWINIQEELGLDVLVHGEFERNDMVEFFGEKLDGFAFTANGWVQSYGSRCVKPPIIYGNVSFTEPMTVAETVYAQSLTDKPVKGMLTGPVTILNWSFVRDDLPLTVIAHQIAEALTHEVTALEEAGIEMIQIDEPAIREGLPLKAEDQQEYLDWAVSAFRASCAHVKATTQIHTHMCYSEFHEMIEAIDDLDADVISIETSRSHGEMISAFEKTTYEKGIGLGVYDIHSPRVPSEEEMLNVIRRALTVLPASLFWVNPDCGLKTRAEKETVAALKNMVAAA
type: DOMAIN
name: Met_Synth_C/arc
description: Cobalamin-independent methionine synthase MetE, C-terminal/archaeal

phrase: PTTTIGSFPQTKDVRRTRSLWRKGELSTVEYERTMKSYIEKWINIQEELGLDVLVHGEFERNDMVEFFGEKLDGFAFTANGWVQSYGSRCVKPPIIYGNVSFTEPMTVAETVYAQSLTDKPVKGMLTGPVTILNWSFVRDDLPLTVIAHQIAEALTHEVTALEEAGIEMIQIDEPAIREGLPLKAEDQQEYLDWAVSAFRASCAHVKATTQIHTHMCYSEFHEMIEAIDDLDADVISIETSRSHGEMISAFEKTTYEKGIGLGVYDIHSPRVPSEEEMLNVIRRALTVLPASLFWVNPDCGLKTRAEKETVAALKNM
type: DOMAIN
name: Met_Synth_C/arc
description: Cobalamin-independent methionine synthase MetE, C-terminal/archaeal
Protein sequence:
MAQAAKILDGKAAAAAIKSELAERVAKLKARGVTPGIATVLVGADPASQLYVSMKHKQSVEIGMNSIQRELPADATQAQVEALIDELNADPACHGYIVQLPLPKHLDTDAILERIDPAKDADGLHPTNLGRLVLNVSGEITSPLPCTPRGVIELLERNGYSLSGKHVVVVGRGVTIGRTIGLLLTRRSVNATVTLTHTGTENLSQLLRQADVIVGAAGAKHIVKAADVKPGAALLDVGVTRETDPETGKSKVHGDIDPAAAEVAGWISPNPGGVGPMTVALLMTNVVEAAERKLAAESAGTA

Annotated regions:
phrase: HPTNLGRLVLNVSGEITSPLPCTPRGVIELLERNGYSLSGKHVVVVGRGVTIGRTIGLLLTRRSVNATVTLTHTGTENLSQLLRQADVIVGAAGAKHIVKAADVKPGAALLDVGVTRETDPETGKSKVHGDIDPAAAEVAGWISPNPGGVGPMTVALLMTNVVEAAER
type: DOMAIN
name: THF_DH/CycHdrlase_NAD-bd_dom
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain

phrase: PAKDADGLHPTNLGRLVLNVSGEITSPLPCTPRGVIELLERNGYSLSGKHVVVVGRGVTIGRTIGLLLTRRSVNATVTLTHTGTENLSQLLRQADVIVGAAGAKHIVKAADVKPGAALLDVGVTRETDPETGKSKVHGDIDPAAAEVAGWISPNPGGVGPMTVALLMTNVVEAA
type: DOMAIN
name: THF_DH/CycHdrlase_NAD-bd_dom
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain

phrase: LDGKAAAAAIKSELAERVAKLKARGVTPGIATVLVGADPASQLYVSMKHKQSVEIGMNSIQRELPADATQAQVEALIDELNADPACHGYIVQLPLPKHLDTDAILERIDPAKDA
type: DOMAIN
name: THF_DH/CycHdrlase_cat_dom
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain

phrase: PGGVGPMT
type: CONSERVED_SITE
name: THF_DH/CycHdrlase_CS
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site
Protein sequence:
MSRAIAADKREDDSQFDSTLRPKSLDDYIGQEKIKGNLRLFIEAARGRGEALDHVLLYGPPGLGKTTLANIVACEMGVNLKSTSGPVIERPGDLAAILTNLEPHDVLFIDEIHRLSHVVEEILYPAMEDFQLDIIIGQGPSARSIKLDLPRFTLVGATTRAGLLSSPLRDRFGVISRMDFYTHDELATIITRSSRILGMEIEPRGADELSRRSRGTPRIANRLLRRVRDFAQVRADGVITRQVVKETLALLEIDEMGFDHMDRMILLTIIDKFSGGPVGLDTIAAAISEESDTIEDVYEPYMIQNGFLNRTPRGRVATLAAYEHFGRSVPAAPQAALL

Annotated regions:
phrase: ALDHVLLYGPPGLGKTTLANIVACEMGVNLKSTSGPVIERPGDLAAILTNLEPHDVLFIDEIHRLSHVVEEILYPAMEDFQLDIIIGQGPSARSIKLDLPRFTLVGATTRAGLLSSPLRDRFGVISRMDFY
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: YTHDELATIITRSSRILGMEIEPRGADELSRRSRGTPRIANRLLRRVRDFAQVRADGVITRQVVKETLALLEI
type: DOMAIN
name: AAA_lid_4
description: RuvB, AAA lid domain

phrase: LRPKSLDDYIGQEKIKGNLRLFIEAARGRGEALDHVLLYGPPGLGKTTLANIVACEMGVNLKSTSGPVIERPGDLAAILTNLEPHDVLFIDEIHRLSHVVEEILYPAMEDFQLDIIIGQGPSARSIKLDLPRFTLVGATTRAGLLSSPLRDRFGVISR
type: DOMAIN
name: RuvB-like_N
description: RuvB-like P-loop domain

phrase: EMGFDHMDRMILLTIIDKFSGGPVGLDTIAAAISEESDTIEDVYEPYMIQNGFLNRTPRGRVATLAAYEH
type: DOMAIN
name: RuvB_C
description: RuvB C-terminal winged helix domain
Protein sequence:
MGLLVFVRNLLLALCLFLVLGFLYYSAWKLHLLQWEDSNSLILSLDSAGQTLGTEYDRLGFLLKLDSKLPAELATKYANFSEGACKPGYASAMMTAIFPRFSKPAPMFLDDSFRKWARIREFVPPFGIKGQDNLIKAILSVTKEYRLTPALDSLHCRRCIIVGNGGVLANKSLGSRIDDYDIVIRLNSAPVKGFEKDVGSKTTLRITYPEGAMQRPEQYERDSLFVLAGFKWQDFKWLKYIVYKERVSASDGFWKSVATRVPKEPPEIRILNPYFIQEAAFTLIGLPFNNGLMGRGNIPTLGSVAVTMALDGCDEVAVAGFGYDMNTPNAPLHYYETVRMAAIKESWTHNIQREKEFLRKLVKARVITDLSSGI

Annotated regions:
Protein sequence:
MGKRVVIALGGNALQQRGQKGSYEEMMDNVRKTARQIAEIIARGYEVVITHGNGPQVGSLLLHMDAGQATYGIPAQPMDVAGAMSQGWIGYMIQQALKNELRKRGMEKKVVTIITQTIVDKNDPAFQNPTKPVGPFYDEETAKRLAREKGWIVKEDSGRGWRRVVPSPDPKGHVEAETIKKLVERGVIVIASGGGGVPVILEDGEIKGVEAVIDKDLAGEKLAEEVNADIFMILTDVNGAALYYGTEKEQWLREVKVEELRKYYEEGHFKAGSMGPKVLAAIRFIEWGGERAIIAHLEKAVEALEGKTGTQVLP

Annotated regions:
phrase: KRVVIALGGNALQQRGQKGSYEEMMDNVRKTARQIAEIIARGYEVVITHGNGPQVGSLLLHMDAGQATYGIPAQPMDVAGAMSQGWIGYMIQQALKNELRKRGMEKKVVTIITQTIVDKNDPAFQNPTKPVGPFYDEETAKRLAREKGWIVKEDSGRGWRRVVPSPDPKGHVEAETIKKLVERGVIVIASGGGGVPVILEDGEIKGVEAVIDKDLAGEKLAEEVNADIFMILTDVNGAALYYGTEKEQWLREVKVEELRKYYEEGHFKAGSMGPKVLAAIRFIEWGGERAII
type: DOMAIN
name: Asp/Glu/Uridylate_kinase
description: Aspartate/glutamate/uridylate kinase
Protein sequence:
MLKRKQSSRVEAQPVTDFGPDESLSDNADILWINKPWVHSLLRICAIISVIPVCMNTPMTFEHYPPLQYVTFTLDTLLMFLYTAEMIAKMHIRGIVKGDSSYVKDRWCVFDGFMVFCLWVSLVLQVFEIADIVDQMSPWGMLRIPRPLIMIRAFRIYFRFELPRTRITNILKRSGEQIWSVSIFLLFFLLLYGILGVQMFGTFTYHCVVNDTKPGNVTWNSLAIPDTHCSPELEEGYQCPPGFKCMDLEDLGLSRQELGYSGFNEIGTSIFTVYEASSQEGWVFLMYRAIDSFPRWRSYFYFITLIFFLAWLVKNVFIAVIIETFAEIRVQFQQMWGTRSSTTSTATTQMFHEDAAGGWQLVAVDVNKPQGRAPACLQKMMRSSVFHMFILSMVTVDVIVAASNYYKGENFRRQYDEFYLAEVAFTVLFDLEALLKIWCLGFTGYISSSLHKFELLLVIGTTLHVYPDLYHSQFTYFQVLRVVRLIKISPALEDFVYKIFGPGKKLGSLVVFTASLLIVMSAISLQMFCFVEELDRFTTFPRAFMSMFQILTQEGWVDVMDQTLNAVGHMWAPLVAIYFILYHLFATLILLSLFVAVILDNLELDEDLKKLKQLKQSEANADTKEKLPLRLRIFEKFPNRPQMVKISKLPSDFTVPKIRESFMKQFIDRQQQDTCCLFRILPSTSSSSCDNPKRPTVEDNKYIDQKLRKSVFSIRARNLLEKETAVTKILRACTRQRMLSGSFEGQPTKERSILSVQHHIRQERRSLRHGSNSQRISRGKSLETLTQDHSNTVRYRNAQREDSEIKMIQEKKEQAEMKRKVQEEELRENHPYFDKPLFIVGREHRFRNFCRVVVRARFNASKTDPVTGAVKNTKYHQLYDLLGLVTYLDWVMITVTICSCISMMFESPFRRVMHAPTLQIAEYVFVIFMSIELNLKIMADGLFFTPTAVIRDFGGVMDIFIYLVSLIFLCWMPQNVPAESGAQLLMVLRCLRPLRIFKLVPQMRKVVRELFSGFKEIFLVSILLLTLMLVFASFGVQLFAGKLAKCNDPNIIRREDCNGIFRINVSVSKNLNLKLRPGEKKPGFWVPRVWANPRNFNFDNVGNAMLALFEVLSLKGWVEVRDVIIHRVGPIHGIYIHVFVFLGCMIGLTLFVGVVIANFNENKGTALLTVDQRRWEDLKSRLKIAQPLHLPPRPDNDGFRAKMYDITQHPFFKRTIALLVLAQSVLLSVKWDVEDPVTVPLATMSVVFTFIFVLEVTMKIIAMSPAGFWQSRRNRYDLLVTSLGVVWVVLHFALLNAYTYMMGACVIVFRFFSICGKHVTLKMLLLTVVVSMYKSFFIIVGMFLLLLCYAFAGVVLFGTVKYGENINRHANFSSAGKAITVLFRIVTGEDWNKIMHDCMVQPPFCTPDEFTYWATDCGNYAGALMYFCSFYVIIAYIMLNLLVAIIVENFSLFYSTEEDQLLSYNDLRHFQIIWNMVDDKREGVIPTFRVKFLLRLLRGRLEVDLDKDKLLFKHMCYEMERLHNGGDVTFHDVLSMLSYRSVDIRKSLQLEELLAREQLEYTIEEEVAKQTIRMWLKKCLKRIRAKQQQSCSIIHSLRESQQQELSRFLNPPSIETTQPSEDTNANSQDHNTQPESSSQQQLLSPTLSDRGGSRQDAADTGKPQRKIGQWRLPSAPKPISHSVSSVNLRFGGRTTMKSVVCKMNPMPDTASCGSEVKKWWTRQLTVESDESGDDLLDI

Annotated regions:
phrase: PWVHSLLRICAIISVIPVCMNTPMTFEHYPPLQYVTFTLDTLLMFLYTAEMIAKMHIRGIVKGDSSYVKDRWCVFDGFMVFCLWVSLVLQVFEIADIVDQMSPWGMLRIPRPLIMIRAFRIYFRFELPRTRITNILKRSGEQIWSVSIFLLFFLLLYGILGVQMFGTFTYHCVVNDTKPGNVTWNSLAIPDTHCSPELEEGYQCPPGFKCMDLEDLGLSRQELGYSGFNEIGTSIFTVYEASSQEGWVFLMYRAIDSFPRWRSYFYFITLIFFLAWLVKNVFIAVIIETFAEIRV
type: DOMAIN
name: Ion_trans_dom
description: Ion transport domain

phrase: HPFFKRTIALLVLAQSVLLSVKWDVEDPVTVPLATMSVVFTFIFVLEVTMKIIAMSPAGFWQSRRNRYDLLVTSLGVVWVVLHFALLNAYTYMMGACVIVFRFFSICGKHVTLKMLLLTVVVSMYKSFFIIVGMFLLLLCYAFAGVVLFGTVKYGENINRHANFSSAGKAITVLFRIVTGEDWNKIMHDCMVQPPFCTPDEFTYWATDCGNYAGALMYFCSFYVIIAYIMLNLLVAIIVENFSLFYST
type: DOMAIN
name: Ion_trans_dom
description: Ion transport domain

phrase: SVFHMFILSMVTVDVIVAASNYYKGENFRRQYDEFYLAEVAFTVLFDLEALLKIWCLGFTGYISSSLHKFELLLVIGTTLHVYPDLYHSQFTYFQVLRVVRLIKISPALEDFVYKIFGPGKKLGSLVVFTASLLIVMSAISLQMFCFVEELDRFTTFPRAFMSMFQILTQEGWVDVMDQTLNAVGHMWAPLVAIYFILYHLFATLILLSLFVAVILDNLE
type: DOMAIN
name: Ion_trans_dom
description: Ion transport domain

phrase: YLDWVMITVTICSCISMMFESPFRRVMHAPTLQIAEYVFVIFMSIELNLKIMADGLFFTPTAVIRDFGGVMDIFIYLVSLIFLCWMPQNVPAESGAQLLMVLRCLRPLRIFKLVPQMRKVVRELFSGFKEIFLVSILLLTLMLVFASFGVQLFAGKLAKCNDPNIIRREDCNGIFRINVSVSKNLNLKLRPGEKKPGFWVPRVWANPRNFNFDNVGNAMLALFEVLSLKGWVEVRDVIIHRVGPIHGIYIHVFVFLGCMIGLTLFVGVVIANFNEN
type: DOMAIN
name: Ion_trans_dom
description: Ion transport domain
Protein sequence:
MTSRMAILSGLLFWLLLEWNPAFAYSPRTPDRVSETDIQRLLHGVMEQLGIARPRVEYPAHQAMNLVGPQSIEGGAHEGLQHLGPFGNIPNIVAELTGDNIPKDFSEDQGYPDPPNPCPLGKTADDGCLENAPDTAEFSREFQLDQHLFDPEHDYPGLGKWNKKLLYEKMKGGQRRKRRSVNPYLQGKRLDNVVAKKSVPHFSEEEKEPE

Annotated regions:
Protein sequence:
MEDALLGAMTGPEDELGAELFGSERAFADGLALSPAGGAADRDELPVLADAYLGATEPGEPLLRALSPPPGAEVPAALLGDFPGLPELRSSDDAAPPPAYSVHVLSSLLPGARGPALLPLSAGVRVIPVEIKEAGGGVPGSSPEDAAFQAPLAQESCCKFSSSQEAEEASGCPRKKDSSPMVICQLKGGAQMLCIDNCGARELKALHLLPQYDDQSSFPQSELPKPMTTLVGRLLPVPAKLNLITQVDNGALPSAVNGAAFPSGPALQGPPKIALAGYCDCFSSGDFCNSCSCNNLRHELERFKAIKACLDRNPEAFQPKMGKGRLGAAKLRHSKGCNCKRSGCLKNYCECYEAKITCSSICKCIACKNYEESPERKMLMSTPHYMEPGDFESSHHLSPAKFSGPPRLRKNRQAFSCISWEVVEATCACLLAQGEEAEQERCSPSLAEQMVLEEFGRCLSQILHIEFKSKGLKIE

Annotated regions:
phrase: KGCNCKRSGCLKNYCECYEAKITCSSICKCIACKN
type: DOMAIN
name: CRC
description: CRC domain

phrase: SGPALQGPPKIALAGYCDCFSSGDFCNSCSCNNLRHELERFKAIKACLDRNPEAFQPKMGKGRLGAAKLRHSKGCNCKRSGCLKNYCECYEAKITCSSICKCIACKNYE
type: DOMAIN
name: CRC
description: CRC domain

phrase: RHSKGCNCKRSGCLKNYCECYEAKITCSSICKCIACKNYEE
type: DOMAIN
name: Tesmin/TSO1-like_CXC
description: Tesmin/TSO1-like CXC domain
Protein sequence:
MDLKQYVSEVEDWPKPGVNFKDITTIMDNGEAYGYATDQIVEYAKLRDVDIIVGPEARGFIIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLTMHKDAIKPGQRVLITDDLLATGGTIEAAIKLVEKLGGIVVGIAFIIELKYLNGIEKIKDYDVMSLISYED

Annotated regions:
phrase: ATDQIVEYAKLRDVDIIVGPEARGFIIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLTMHKDAIKPGQRVLITDDLLATGGTIEAAIKLVEKLGGIVVGIAFIIELKYLNGIEKIKDY
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: IVEYAKLRDVDIIVGPEARGFIIGCPVAYSMGIGFAPVRKEGKLPREVIRYEYDLEYGTNVLTMHKDAIKPGQRVLITDDLLATGGTIEAAIKLVEKLGGIVVGIAFIIEL
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain
Protein sequence:
MSDSNSRLVYSTQTGRIEEPKTAPVRPKGDGIVRIQRQTSGRKGKGVCLITGIEMNDAELTKLAAELKKKCGCGGAVKEGIIEIQGDKRDLIKSLLEAKGMKVKLAGG

Annotated regions:
phrase: RIQRQTSGRKGKGVCLITGIEMNDAELTKLAAELKKKCGCGGAVKEGIIEIQGDKRDLIKSLLEAK
type: DOMAIN
name: SUI1
description: SUI1 domain

phrase: GIVRIQRQTSGRKGKGVCLITGIEMNDAELTKLAAELKKKCGCGGAVKEGIIEIQGDKRDLIKSLLEAKGM
type: DOMAIN
name: SUI1
description: SUI1 domain
Protein sequence:
MEQNPQSQLKLLVTYGKEQGYLTYSEINDHLSDNIINSDQIEDIIQMINDMGIQVVEKAPDSDDLILHEIKRNNETDEDIVEATAQVLSTVESELGRTTDPVRMYMREMGTVELLTREGEIDIAKRIEDGINQVQCSVAEYPEAITHLLEQYNRVELGELRLSELIHGFVDPNAEAVHTSITNHINTNSEEHHHNDNTEENNDDDHLVDPELAREKFIALKNQYHITNYAIKTKNRNHQDTLIEINNLSEIFKQFRLVPKQFDHLVINMRKMMQKIRIQERNIAKLCIEYGNIPKKALLNFFSLQKTNQIWSKIVQNIKKPWIDKFNTIKPDIQMILKKLQKVEEETGLTIHQVKNINKRISLGEAKAKRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQILQEIGREPTPEELSERMLIPEDKIRKVLKIAKEPISMETPIGEDDDSHLGDFLEDTNIELPLDSATSASLRSATKNVLSGLTTREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEILRSFLDD

Annotated regions:
phrase: YPEAITHLLEQYNRVELGELRLSELIHGFVDPNAEAVHTSITNHINTNSEEHHHNDNTEENNDDDHLVDPELAREKFIALKNQYHITNYAIKTKNRNHQDTLIEINNLSEIFKQFRLVPKQFDHLVINMRKMMQKIRIQERNIAKLCIEYGNIPKKALLNFFSLQKTNQIWSKIVQNIKKPWIDKFNTIKPDIQMILKKLQKV
type: DOMAIN
name: RNA_pol_sigma_70_non-ess
description: RNA polymerase sigma factor 70, non-essential domain

phrase: AKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQILQEIGREPTPEELSERMLIPEDKIRKVLKIAKEPISMETPIGEDDDSHLGDFLEDTNIELPLDSATSASLRSATKNVLSGLTTREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLR
type: DOMAIN
name: RNA_pol_sigma-70_dom
description: RNA polymerase sigma-70-like domain

phrase: ETINKLNRISRQILQEIGREPTPEELSERMLIPEDKIRKVLKIAKEPISMETPIGEDDDSHLGDFLEDTNIELPLD
type: DOMAIN
name: RNA_pol_sigma70_r3
description: RNA polymerase sigma-70 region 3

phrase: VLSGLTTREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLR
type: DOMAIN
name: RNA_pol_sigma70_r4
description: RNA polymerase sigma-70 region 4

phrase: TLEEVGKQFDVTRERIRQIEAKALRK
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: MVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQAR
type: DOMAIN
name: RNA_pol_sigma70_r2
description: RNA polymerase sigma-70 region 2

phrase: AKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQILQEIGREPTPEELSERMLIPEDKIRKVLKIAKEPISMETPIGEDDDSHLGDFLEDTNIELPLDSATSASLRSATKNVLSGLTTREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEILRSF
type: DOMAIN
name: RNA_pol_sigma_RpoD_C
description: RNA polymerase sigma factor RpoD, C-terminal

phrase: DLIQEGNIGLMKA
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: DLIQEGNIGLMKA
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: FSTYATWW
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: LTTREAKVLRMR
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: TLEEVGKQFDVTRER
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: IRQIEAKALRK
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: DPVRMYMREMGTVELLTREGEIDIAKRIED
type: DOMAIN
name: RNA_pol_sigma70_r1_2
description: RNA polymerase sigma-70 region 1.2

phrase: NPQSQLKLLVTYGKEQGYLTYSEINDHLSDNIINSDQIEDIIQMINDMGIQVVEKAPDSDDLILHEIKRNNETDEDI
type: DOMAIN
name: RNA_pol_sigma_70_r1_1
description: RNA polymerase sigma factor 70, region 1.1
Protein sequence:
MASQGTKRSYEQMETGGERQNATEIRASVGRMVGGIGRFYIQMCTEIKLSDYEGRLIQNSITIERMVLSAFEERRNKYLEEHPSAGKDPKKTGGPIYRRRDGKWVRELILYDKEEIRRIWRQANNGEDATAGLTHLMIWHSNLNDATYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAIKGVGTMVMELIRMIKRGINDRNFWRGENGRRTRTAYERMCNILKGKFQTAAQRAMMDQVRESRNPGNAEIEDLIFLARSALILRGSVAHKSCLPACVYGLAVASGYDFEREGYSLVGIDPFRLLQNSQVFSLIRPNENPAHKSQLVWMACHSAAFEDLRVSSFIRGTRLVPRGQLSTRGVQIASNENMEAMDSNTLELRSRYWAIRTRSGGNTNQQRASAGQISVQPTFSVQRNLPFERATIMAAFTGNNEGRTSDMRTEIIRMMESARPEDVSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAEEYDN

Annotated regions:
Protein sequence:
MADIIDIANPTRTQAILNQYGLHAKKKFGQNFLTDLNVLHGIVDVAGITSEDYVIEIGPGIGALTEQLARSAKKVVAFEIDPHMVAVLAETLLPYDNVKVIENDILKVNLAHVIATEFGEGAHVKIVANLPYYITTPILMQLLRAKISWDNIVVMMQREVADRLNAEIGTKAYGVLTLTIQYYAQAQLAIKVPASAFNPSPNVDSAVVMLTPIVPETVVDNPDKLFSVVKGSFAHRRKSLWNNMLQMFGKQEDVKQRIQDALDSVNIASSIRAERLSLNQLTALYEALKLQGLIK

Annotated regions:
phrase: VIEIGPGIGALTEQLARSAKKVVAFEI
type: CONSERVED_SITE
name: rRNA_Ade_Mease_Trfase_CS
description: Ribosomal RNA adenine methylase transferase, conserved site

phrase: VLHGIVDVAGITSEDYVIEIGPGIGALTEQLARSAKKVVAFEIDPHMVAVLAETLLPYDNVKVIENDILKVNLAHVIATEFGEGAHVKIVANLPYYITTPILMQLLRAKISWDNIVVMMQREVADRLNAEIGTKAYGVLTLTIQYYAQAQLAIKVPASAFNPSPNVDSAVVMLTPI
type: DOMAIN
name: rRNA_Ade_methylase_Trfase_N
description: Ribosomal RNA adenine methylase transferase, N-terminal
Protein sequence:
METWQEVTVHVHRDAQEAVSHVLIETGSQGVAIADSADYIGQKDRFGELYPDVEQSDMIAITAYYPSSTNLADVIATINEQLAELASFGLQVGQVTVDSQELAEEDWADNWKKYYEPARITHDLTIVPSWTDYDASAGEKVIKLDPGMAFGTGTHPTTKMSLFALEQVLRGGETVIDVGTGSGVLSIASSLLGAKTIYAYDLDDVAVRVAQENIDLNQGTDNIHVAAGDLLKGVSQEADVIVANILADILVLLTDDAYRLVKKEGYLILSGIISEKLDMVLETAFSAGFFLETHMVQGEWNALVFKKTDDISGVIGG

Annotated regions:
Protein sequence:
MFRQVSVRALRRAAGRSVCASRAQMVRHSSTLGGGKGSYNLDMPALALAAGVTLLAGYMVYPRAPKAKQAAVQSVAPVNENVEQASASLQASAPVQATSESAEAGEEEAYGEESGAVNEEAAGEPEEAAAEVGETQAEQAPAVETEQAAEAEQAAEAAAEDKASAGEAAQGQQGAYNPDTGEINWDCPCLGGMAHGPCGEEFKAAFACFVYSEAEPKGIDCVEKFQVMQDCFRQHPEHYAEQLESEEQAVRETEAAAESAKSDEGH

Annotated regions:
phrase: WDCPCLGGMAHGPCGEEFKAAFACFVYSEAEPKGIDCVEKFQVMQDCFRQHPEHYAEQLESEEQAVRE
type: DOMAIN
name: GCK_dom
description: GCK domain

phrase: CGEEFKAAFACFVYSEAEPKGIDCVEKFQVMQDCFR
type: DOMAIN
name: CHCH
description: CHCH
Protein sequence:
MYNLQEITEKARKAIDALQDNSIESLEAIRVEYFGKKGHFTQLMQGLRDVSAEERPAVGAKINEAKQKVQAILNAKKVEWEEIALNERLAQERIDVSLPGRKMELGGLHPVSITINRVVQFFSKLGFTVEIGPEIETDYYNFDALNIPKHHPARADHDTFWFDAERLLRTQTSGVQIRTMEKMCPPIRIMAPGKVYRNDYDQTHTPMFHQIELLYVDKKANFTELKGLLHDFLRAFFEEDLQVRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVHPNVLRNVGIDPNEYSGFAVGMGVERLTMLRYNVTDLRSFFENDLRFLKQFK

Annotated regions:
phrase: VVQFFSKLGFTVEIGPEIETDYYNFDALNIPKHHPARADHDTFWFDAERLLRTQTSGVQIRTMEKMCPPIRIMAPGKVYRNDYDQTHTPMFHQIELLYVDKKANFTELKGLLHDFLRAFFEEDLQVRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVHPNVLRNVGIDPNEYSGFAVGMGVERLTMLRYNVTDLRSFFENDLRFLK
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: IDVSLPGRKMELGGLHPVSITINRVVQFFSKLGFTVEIGPEIETDYYNFDALNIPKHHPARADHDTFWFDAERLLRTQTSGVQIRTMEKMCPPIRIMAPGKVYRNDYDQTHTPMFHQIELLYVDKKANFTELKGLLHDFLRAFFEEDLQVRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVHPNVLRNVGIDPNEYSGFAVGMGVERLTMLRYNVTDLRSFFENDLRFLKQ
type: DOMAIN
name: Phenylalanyl-tRNA_Synthase
description: Phenylalanyl-tRNA synthetase

phrase: SIESLEAIRVEYFGKKGHFTQLMQGLRDVSAEERPAVGAKINEAKQKVQAILNAKKVEWEEIALNER
type: DOMAIN
name: Phe-tRNA_ligase_II_N
description: Phenylalanine-tRNA ligase, class II, N-terminal
Protein sequence:
MIQKIIFATLLSFTVAIISGRFFIPYLRKLKFGQKVREDGPKTHLKKSGTPTMGGIIFVVATFLTSLIFSPWNKYLFILLAGFLGYGLIGFADDFLKVYFKRSLGLRAREKLLAQFLLAIVISWFIKSNVGTEIIVPFFKRSVDLANFYIPFAVFIIVGTVNSVNLTDGLDGLAAGVSTIVMAFFAMIALFLNDVTYGVFSASLTGGLLGFLRYNKHPAEVFMGDTGSLAIGGAVATVALLTKLPLILPVLGIIYVAEAISVILQVFSFKLFGKRIFKMSPLHHHFELSGWKEEKVVYSFWLVTLIALFVSFYSLS

Annotated regions:
phrase: KSGTPTMGGIIF
type: CONSERVED_SITE
name: PNAcMuramoyl-5peptid_Trfase_CS
description: Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site

phrase: KSGTPTMGGIIF
type: CONSERVED_SITE
name: PNAcMuramoyl-5peptid_Trfase_CS
description: Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site

phrase: NSVNLTDGLDG
type: CONSERVED_SITE
name: PNAcMuramoyl-5peptid_Trfase_CS
description: Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site
Protein sequence:
MTIIQRSTSLNNIINEKLGKIIVASNTLPITVTKFNETPLFGSPLSASRESITSSFGMSEPSRDRESKIQIQINGHPFPTQSALETLKAKDEIEDWLWIGWSHCEVNEDEEPMLNQAIKEFSPHFEHVFLNPRQFENYYKGYCKNGLWLLLHYQMNFIRMQSEWWEEYVGVNQMFAEKIASVWRPSDIIWIHDYHLMLVPQMLRQLLPPEASIGFFFHAPFPSYELFRILPNRKELLKGILSSNLIGFQSFEYVRHFKSSCARLLDLEVHPKGLEIFEDGSTHFTKLQVYPIGVDYNDFAKNLNLPEVSSRVESLRKIFKGKKVVVARDRLDQIEGVPRKLEVFEQLLNDHPEYIGKLVFIQIYEPTVEEGDETDEQKILHKTVNEMVGRINGKFGKLSFNPIEYINKKISYEELSALYKLADIALITPIRDGMNLTSHEYVVCQKDNFGVLILSEFAGAARCLGGSIIVNPFSKKEIMEAIIEALNMSMHDRKLKHQINYNYVLANTSSFWGKRFLCDLNEATQKEIMETSVPRANFQEIEDSYKKAKVRVFFLDYDGTLTPLVRLPSQAMPSKQLIDVLSKLTEDRRNEVYVISGRDRSSLEKWLGHLPIGMSCEHGVFTRQPGENQPWTESPNAEVQWKDTVLSIMQDFEDRTPGSMTETKQVNITWHYRNADPDFGQFQAKELIAQLRSVANKYPLDILSGKKAIEVKPIGINKGEIVKMILQKIDADFILCIGDDKTDEDMFKALYNVPSFTIRVCGDLEESTKARGVVESSSEVLTLLNRLSLS

Annotated regions:
Protein sequence:
MVKSHIGSWILVLFVAMWSDVALCKKRPKPGGGWNTGGSRYPGQGSPGGNRYPPQEGGDWGQPHGGGWGQPHVGGWGQPHGGGWGQPHGGGGWGQGGTHGQWNKPSKPKTNMKHVAGAAAAGAVVGGLGGYMLGSAMSRPLIHFGSDYEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNITVKQHTVTTTTKGENFTETDIKMMERVVEQMCITQYQRESEAYYQRGASVILFSSPPVILLISFLIFLIVG

Annotated regions:
phrase: MSRPLIHFGSDYEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNITVKQHTVTTTTKGENFTETDIKMMERVVEQMCITQYQRESEAYYQRGASVILFSSPPVILLISFLIFL
type: DOMAIN
name: Prion/Doppel_prot_b-ribbon_dom
description: Prion/Doppel protein, beta-ribbon domain

phrase: MVKSHIGSWILVLFVAMWSDVALCKKRPK
type: DOMAIN
name: Prion_N
description: Major prion protein N-terminal

phrase: AGAAAAGAVVGGLGG
type: DOMAIN
name: Prion/Doppel_prot_b-ribbon_dom
description: Prion/Doppel protein, beta-ribbon domain

phrase: ETDIKMMERVVEQMCITQ
type: DOMAIN
name: Prion/Doppel_prot_b-ribbon_dom
description: Prion/Doppel protein, beta-ribbon domain

phrase: PPQEGGDWGQPHGGGWGQPHVGGWGQPHGGGWGQPHGGGGWGQGG
type: REPEAT
name: Prion_copper_b_octapeptide
description: Prion, copper binding octapeptide repeat region
Protein sequence:
MADPAGTNGEEGTGCNGWFYVEAVVEKKTGDAISDDENENDSDTGEDLVDFIVNDNDYLTQAETETAHALFTAQEAKQHRDAVQVLKRKYLVSPLSDISGCVDNNISPRLKAICIEKQSRAAKRRLFESEDSGYGNTEVETQQMLQVEGRHETETPCSQYSGGSGGGCSQYSSGSGGEGVSERHTICQTPLTNILNVLKTSNAKAAMLAKFKELYGVSFSELVRPFKSNKSTCCDWCIAAFGLTPSIADSIKTLLQQYCLYLHIQSLACSWGMVVLLLVRYKCGKNRETIEKLLSKLLCVSPMCMMIEPPKLRSTAAALYWYKTGISNISEVYGDTPEWIQRQTVLQHSFNDCTFELSQMVQWAYDNDIVDDSEIAYKYAQLADTNSNASAFLKSNSQAKIVKDCATMCRHYKRAEKKQMSMSQWIKYRCDRVDDGGDWKQIVMFLRYQGVEFMSFLTALKRFLQGIPKKNCILLYGAANTGKSLFGMSLMKFLQGSVICFVNSKSHFWLQPLADAKIGMLDDATVPCWNYIDDNLRNALDGNLVSMDVKHRPLVQLKCPPLLITSNINAGTDSRWPYLHNRLVVFTFPNEFPFDENGNPVYELNDKNWKSFFSRTWSRLSLHEDEDKENDGDSLPTFKCVSGQNTNTL

Annotated regions:
phrase: CTFELSQMVQWAYDNDIVDDSEIAYKYAQLADTNSNASAFLKSNSQAKIVKDCATMCRHYKRAEKKQMSMSQWIKYRCDRVDDGGDWKQIVMFLRYQGVEFMSFLTALKRFLQGIPKKNCILLYGAANTGKSLFGMSLMKFLQGSVICFVNSKSHFWLQPLADAKIGMLDDATVPCWNYIDDNLRNALDGNLVSMDVKHRPLVQLKCPPLLITSNINAGTDSRWPYLHNRLVVFTFPNEFPFDENGNPVYELNDKNWKSFFSRTWSRLSLHEDEDKENDGDSLPTFK
type: DOMAIN
name: PPV_DNA_helicase_E1_C
description: DNA helicase E1, C-terminal, Papillomavirus

phrase: KFKELYGVSFSELVRPFKSNKSTCCDWCIAAFGLTPSIADSIKTLLQQYCLYLHIQSLACSWGMVVLLLVRYKCGKNRETIEKLLSKLLCVSPMCMMIEPPKLRSTAAALYWYKTGISNISEVYGDTPEWIQRQTVLQ
type: DOMAIN
name: PPV_E1_DBD
description: DNA helicase E1, DNA-binding domain, papillomavirus

phrase: VEFMSFLTALKRFLQGIPKKNCILLYGAANTGKSLFGMSLMKFLQGSVICFVNSKSHFWLQPLADAKIGMLDDATVPCWNYIDDNLRNALDGNLVSMDVKHRPLVQLKCPPLLITSNINAGTDSRWPYLHNRLVVFTFPNEFPFDENGNP
type: DOMAIN
name: Helicase_SF3_DNA-vir
description: Helicase, superfamily 3, DNA virus

phrase: MADPAGTNGEEGTGCNGWFYVEAVVEKKTGDAISDDENENDSDTGEDLVDFIVNDNDYLTQAETETAHALFTAQEAKQHRDAVQVLKRKYLVSPLSDISGCVDNNISPRLKAICIEKQSRAAKRRLFESEDSGYGN
type: DOMAIN
name: PPV_DNA_helicase_E1_N
description: DNA helicase E1, N-terminal, Papillomavirus
Protein sequence:
MIKVIKKKSHSGLKKRIKISKKKKLLRGHAYKNHLAASKTTKQNRQLRGVTCVKLCDYNRIKTLIRGL

Annotated regions:
phrase: KSHSGLKKRIKISKKKKLLRGHAYKN
type: CONSERVED_SITE
name: Ribosomal_bL35_CS
description: Large ribosomal subunit protein bL35, conserved site
Protein sequence:
MSQNFGKISQVIGAVIDVEFEPGKLPPIYNALRVTNPAIDDKEYNLVLEVAQHLGENAVRTIAMDSTDGLVRGQAVLDTGKQISVPVGRKTLGRILNVIGEPVDEMGPVNAEKEYGIHREAPAFVDQSTKVEAFTTGIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIAKQHGGFSVFAGVGERTREGNDLWMEMKESGVLDKAALVYGQMNEPPGARARVALSALSIAEYFRDEEGQNVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGELQERITSTTKGSITSVQAIYVPADDLTDPAPATAFAHLDATTVLSRQIAELGIYPAVDPLDSTSRILDPQVIGEEHYSIARQVQYVLQKYKDLQDIIAILGMDELSEEDKLVVARARKIQRFLSQPFHVAEAFTGSPGKYVELKDTIKGFQEIVAGKHDDVPEQAFYMVGTIEEALEKAKKLAA

Annotated regions:
phrase: GIKVVDLLAPYARGGKIGLFGGAGVGKTVLIMELINNIAKQHGGFSVFAGVGERTREGNDLWMEMKESGVLDKAALVYGQMNEPPGARARVALSALSIAEYFRDEEGQNVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGELQERITSTTKGSITSVQAIYVPADDLTDPAPATAFAHLDATTVLSRQIAELGIYPAVDPLDST
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_nucl-bd
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain

phrase: PAVDPLDST
type: ACTIVE_SITE
name: ATPase_a/bsu_AS
description: ATPase, alpha/beta subunit, nucleotide-binding domain, active site

phrase: RGGKIGLFGGAGVGKTVLIMELINNIAKQHGGFSVFAGVGERTREGNDLWMEMKESGVLDKAALVYGQMNEPPGARARVALSALSIAEYFRDEEGQNVLLFVDNIFRFTQAGSEVSALLGRIPSAVGYQPTLATEMGELQERITSTTKGSITSVQAIYVPADDLTDPAPATAFAHLDATTVLSRQI
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: PQVIGEEHYSIARQVQYVLQKYKDLQDIIAILGMDELSEEDKLVVARARKIQRFLSQPFHVAEAFTGSPGKYVELKDTIKGFQE
type: DOMAIN
name: ATP-synt_VA_C
description: ATP synthase A/B type, C-terminal domain

phrase: ISQVIGAVIDVEFEPGKLPPIYNALRVTNPAIDDKEYNLVLEVAQHLGENAVRTIAMDSTDGLVRGQAVLDT
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_N
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain
Protein sequence:
MAQIRIHEVNTRIENEVEVSKFLQEEGVLYEKWNISKLPPHLNENYSLTDENKAEILAVFSKEIADVSARRGYKAHDVISLSNSTPNLDELLINFQKEHHHTDDEVRFIVSGHGIFAIEGKDGTFFDVELEPGDLISVPENARHYFTLQDDRQVVAIRIFVTTEGWVPIY

Annotated regions: