nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MALGSNTKFYETPNHPFQGERIAEEGDLLSRYGLVNKEELWRAQSELRDYRREARRLIGEAQGDTVAAAEAGSEFLARLKRIGVLDDEDSLDDILSLDVTDILERRLQTVAYRKGLGNTPQQARQFIAHGHVTVNGARVSAPSYKVDVAEEGEIEFDETSPLADDLHPERAEGQ

Annotated regions:
phrase: RRLQTVAYRKGLGNTPQQARQFIAHGHVTVNGARVSAPSYKVDVAEEGEIEFDETSPLADDL
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: MALGSNTKFYETPNHPFQGERIAEEGDLLSRYGLVNKEELWRAQSELRDYRREARRLIGEAQGDTVAAAEAGSEFLARLKRIGVLDDEDSLDDILSLDVTDIL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: RRLQTVAYRKGLGNTPQQARQFIAHGHVTVNGARVSAPSYKVD
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain
Protein sequence:
MARLLFRLLQEANSTSPAEASPPFNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIASRNRSDQTHPPPVAAANKGLKKKVLRSLPKLTYSPDSPPAEKLVECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILVVTRCHKCGGLPGSSSSGPEPDTRIKQREDGPDNLP

Annotated regions:
phrase: CAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSC
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: ECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSC
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: CAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPS
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type
Protein sequence:
MSRIGKLPITIPENVDINYNDSEITVKGKFGTLQTQIPTVIKITESDNILTVGLSEQTRSVRALHGLYRTLINNMVIGVSEQFEIILELKGVGYRAAVQNNEIILNLGYSHPVNIKIPNIISVEVVQNTTINLKSCDKELLGLFAANIRAWRQPEPYKGKGILYKGEQIIRKAGKSAK

Annotated regions:
phrase: PEPYKGKG
type: CONSERVED_SITE
name: Ribosomal_uL6_CS
description: Large ribosomal subunit protein uL6, conserved site

phrase: IPENVDINYNDSEITVKGKFGTLQTQIPTVIKITESDNILTVGLSEQTRSVRALHGLYRTLINNMVIGVS
type: DOMAIN
name: Ribosomal_uL6_a/b-dom
description: Large ribosomal subunit protein uL6, alpha-beta domain

phrase: GVGYRAAVQNNEIILNLGYSHPVNIKIPNIISVEVVQNTTINLKSCDKELLGLFAANIRAWRQPEPYKGKGIL
type: DOMAIN
name: Ribosomal_uL6_a/b-dom
description: Large ribosomal subunit protein uL6, alpha-beta domain
Protein sequence:
MQFAQKLDQLEKRFDELTQQMADPAVISDADQYRKVAKAQSELSDIAAKYREWKKVEDGLAQARPMLQEQDAELKEMAELEIAQLEPEKLRIEEELRVLLLPKDPNDDKNVVLEIRAGTGGDEATLFAAEIFRMYSRYAETQNWKMEVTSSSESSVGGLKEVIALVSGNKVYAKLKYESGVHRVQRVPVTEQQGRVHTSAITVAVLPEADEVEVKLEAKDIRIDTFCSSGPGGQSVNTTYSAVRITHLPTGLVVSCQDEKSQIKNRAKAERVLRSRLYELELEKQQAALGAERRTMVGSGDRSEKIRTYNFPQNRVSDHRIGLTLHQLDFVMEGKMDAIVDALTEFYQAQKLKQQAEKGPVS

Annotated regions:
phrase: LEKRFDELTQQMADPAVISDADQYRKVAKAQSELSDIAAKYREWKKVEDGLAQARPMLQEQDAELKEMAELEIAQLEPEKLRIEEELRVLLLPKDPNDDKNVVLEIRAGTGGDEATLFAAEIFRMYSRYAETQNWKMEVTSSSESSVGGLKEVIALVSGNKVYAKLKYESGVHRVQRVPVTEQQGRVHTSAIT
type: DOMAIN
name: PCRF
description: Peptide chain release factor

phrase: PMLQEQDAELKEMAELEIAQLEPEKLRIEEELRVLLLPKDPNDDKNVVLEIRAGTGGDEATLFAAEIFRMYSRYAETQNWKMEVTSSSESSVGGLKEVIALVSGNKVYAKLKY
type: DOMAIN
name: PCRF
description: Peptide chain release factor

phrase: DEVEVKLEAKDIRIDTFCSSGPGGQSVNTTYSAVRITHLPTGLVVSCQDEKSQIKNRAKAERVLRSRLYELELEKQQAALGAERRTMVGSGDRSEKIRTYNFPQNRVSDH
type: DOMAIN
name: Pep_chain_release_fac_I
description: Peptide chain release factor class I
Protein sequence:
MSQDFYEILGVSRDASEDEIQEAYREKAREYHPDVSDDPDAEEKFKQAKKAKEVLTDEEKRQMYDQMGHERFEQAEKRGGAGGGGGRGGMGGDPFGGGAGGFDMQDIFDQFFGGGGRGGRGGSRRRQGQDLQTRLEIDLEEAYNGATKQLNVTRPEACDDCDGAGHPPGADSETCPECNGQGQTTQVQQTPMGRVQQRTTCRRCDGEGTLYDETCSTCRGNGVVQNDASLEVEIPSGIADGQTLRMEREGAPGENGGPNGDLLIEVQVRDHPDFERDGDSLQHQQAISFPQAVFGDTITVPTLDGEVEVDVPSGTQSGEVFRLEGKGMPRLRRRGHGDLYVQVQVVTPDSLNAEQKEALEQFAEAGGEEVDVDEGFFEKLKNSL

Annotated regions:
phrase: QDFYEILGVSRDASEDEIQEAYREKAREYHPDVSDDPDAEEKFKQAKKAKEVLTDEE
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: CDDCDGAGHPPGADSETCPECNGQGQTTQVQQTPMGRVQQRTTCRRCDGEGTLYDETCSTCRGN
type: DOMAIN
name: HSP_DnaJ_Cys-rich_dom
description: Heat shock protein DnaJ, cysteine-rich domain

phrase: DFYEILGVSRDASEDEIQEAYREKAREYHPDVSDDPDAEEKFKQAKKAKEVLT
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: DFYEILGVSRDASEDEIQEAYREKAREYHPDVSDDPDAEEKFKQAKKAKEVLTDEEKRQMYDQM
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: QTRLEIDLEEAYNGATKQLNVTRPEACDDCDGAGHPPGADSETCPECNGQGQTTQVQQTPMGRVQQRTTCRRCDGEGTLYDETCSTCRGNGVVQNDASLEVEIPSGIADGQTLRMEREGAPGENGGPNGDLLIEVQVRDHPDFERDGDSLQHQQAISFPQAVFGDTITVPTLDGEVEVDVPSGTQSGEVFRLEGKGMPRLRRRGHGDLYVQVQVVT
type: DOMAIN
name: DnaJ_C
description: Chaperone DnaJ, C-terminal

phrase: YEILGVSRDASEDEIQEA
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: YREKAREYHPDVSDD
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: DAEEKFKQAKKAKEVLTDEE
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: KRQMYDQMGHERFEQAEKR
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: DFYEILGVSRDASEDEIQEAYREKAREYHPDVSDDPDAEEKFKQAKKAKEVLTDEEKRQMY
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: CDDCDGAGHPPGADSETCPECNGQGQTTQVQQTPMGRVQQRTTCRRCDGEGTLYDETCSTCRGN
type: DOMAIN
name: HSP_DnaJ_Cys-rich_dom
description: Heat shock protein DnaJ, cysteine-rich domain

phrase: GATKQLNVTRPEACDDCDGAGHPPGADSETCPECNGQGQTTQVQQTPMGRVQQRTTCRRCDGEGTLYDETCSTCRGNGVVQN
type: DOMAIN
name: HSP_DnaJ_Cys-rich_dom
description: Heat shock protein DnaJ, cysteine-rich domain
Protein sequence:
MYKSLSLDLTKTKPFLNDYEVEQLQPMVSAAHKLLHEKTGAGNDFLGWIDLPVNYDKDEFARIKKSAEKIRNNSEALIVIGIGGSYLGARAAIEMLTHTFGNVASKEARKAPQIFYAGNNISSTYMADLIETVKDMDFSVNVISKSGTTTEPAIAFRIFKDLLEKKYGKEGAKERIFATTDKAKGALRTLADSEGYETFVIPDDVGGRYSVLTAVGLLPIATAGVDIDEMMKGAADAREEYSTDDLSKNTAYRYAAARNALYNKGKNIEMMVNFEPCLHYIGEWWKQLFGESEGKDHKGIFPAAADFSTDLHSMGQYIQEGLRTLVETHLNVEKPRKSVIIEANEDNLDGLNFLAGKDMDYVNNQAFRGTVIAHNEGEVPNMIINIPELTPYYFGYLVYFFEKSCALSGYLLGVNPFNQPGVEAYKKNMFALLGKPGYEDMKAEIEAKLQ

Annotated regions:
phrase: DDVGGRYSVLTAV
type: CONSERVED_SITE
name: Phosphoglucose_isomerase_CS
description: Phosphoglucose isomerase, conserved site

phrase: NIEMMVNFEPCLHYIGEWWKQLFGESEGKDHKGIFPAAADFSTDLHSMGQYIQEGLRTLVETHLNVEKPRKSVIIEANEDNLDGLNFLAGKDMDYVNNQAFRGTVIAHNEGEVPNMIINIPELTPYYFGYLVYFFEKSCALSGYLLGVNPFNQPGVEAYKKNMFA
type: DOMAIN
name: SIS_PGI_2
description: Phosphoglucose isomerase, SIS domain 2

phrase: KDEFARIKKSAEKIRNNSEALIVIGIGGSYLGARAAIEMLTHTFGNVASKEARKAPQIFYAGNNISSTYMADLIETVKDMDFSVNVISKSGTTTEPAIAFRIFKDLLEKKYGKEGAKERIFATTDKAKGALRTLADSEGYETFVIPDDVGGRYSVLTAVGLLPIAT
type: DOMAIN
name: SIS_PGI_1
description: Phosphoglucose isomerase, SIS domain 1

phrase: GYLLGVNPFNQPGVEAY
type: CONSERVED_SITE
name: Phosphoglucose_isomerase_CS
description: Phosphoglucose isomerase, conserved site
Protein sequence:
MKATLRTRLDGFQERFEELAALLAEPDVIADQARFRDYSREYAELEPLIEAWRSYRRTEDDLEAAEQMREDSDPEMRELAEEEWREAQARLEALDADVKRLLVPRDPDDASNVFLEIRAGTGGDEAALFAGDLFRMYSRYAEKVGWRIEVINASHGEQGGYKELIARVRGDNVYARLKFESGAHRVQRVPATESQGRIHTSACTVAVMAEASAVGEVELNSNDLRVDTFRSSGAGGQHVNTTDSAIRITHLPSGLVVECQEERSQHKNRAKAMALLAARLKQSAVDAQRQQQADTRRSLVGSGDRSERIRTYNFPQGRITDHRINLTLYKLGDVMAGELGEVIDPLIHEYQAEQLSALQAS

Annotated regions:
phrase: EQMREDSDPEMRELAEEEWREAQARLEALDADVKRLLVPRDPDDASNVFLEIRAGTGGDEAALFAGDLFRMYSRYAEKVGWRIEVINASHGEQGGYKELIARVRGDNVYARLKF
type: DOMAIN
name: PCRF
description: Peptide chain release factor

phrase: EVELNSNDLRVDTFRSSGAGGQHVNTTDSAIRITHLPSGLVVECQEERSQHKNRAKAMALLAARLKQSAVDAQRQQQADTRRSLVGSGDRSERIRTYNFPQGRITDH
type: DOMAIN
name: Pep_chain_release_fac_I
description: Peptide chain release factor class I

phrase: QERFEELAALLAEPDVIADQARFRDYSREYAELEPLIEAWRSYRRTEDDLEAAEQMREDSDPEMRELAEEEWREAQARLEALDADVKRLLVPRDPDDASNVFLEIRAGTGGDEAALFAGDLFRMYSRYAEKVGWRIEVINASHGEQGGYKELIARVRGDNVYARLKFESGAHRVQRVPATESQGRIHTSACT
type: DOMAIN
name: PCRF
description: Peptide chain release factor

phrase: RSSGAGGQHVNTTDSA
type: DOMAIN
name: Pep_chain_release_fac_I
description: Peptide chain release factor class I
Protein sequence:
MSIMDERLLSGESAYEDADLEYSLRPQTLRQYIGQDKAKHNLEVFIEAAKMREETLDHVLLYGPPGLGKTTLANIIANEMGVNVRTTSGPAIERPGDLAAVLTSLQPGDVLFIDEIHRLHRSIEEVLYPAMEDFCLDIVIGKGPSARSVRLDLPPFTLVGATTRAGALSAPLRDRFGVLSRLEYYTVDQLSAIVERTAEVFEVEIDSLAALEIARRARGTPRIANRLLRRVRDFAQVRGNGTVTMEITQMALELLQVDKLGLDHIDHKLLLGIIEKFRGGPVGLETVSATIGEESHTIEDVYEPYLLQIGFLQRTPRGRIVTPLAYEHFGMEMPKV

Annotated regions:
phrase: TLDHVLLYGPPGLGKTTLANIIANEMGVNVRTTSGPAIERPGDLAAVLTSLQPGDVLFIDEIHRLHRSIEEVLYPAMEDFCLDIVIGKGPSARSVRLDLPPFTLVGATTRAGALSAPLRDRFGVLSRLEYY
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LRPQTLRQYIGQDKAKHNLEVFIEAAKMREETLDHVLLYGPPGLGKTTLANIIANEMGVNVRTTSGPAIERPGDLAAVLTSLQPGDVLFIDEIHRLHRSIEEVLYPAMEDFCLDIVIGKGPSARSVRLDLPPFTLVGATTRAGALSAPLRDRFGVLSR
type: DOMAIN
name: RuvB-like_N
description: RuvB-like P-loop domain

phrase: KLGLDHIDHKLLLGIIEKFRGGPVGLETVSATIGEESHTIEDVYEPYLLQIGFLQRTPRGRIVTPLAYEH
type: DOMAIN
name: RuvB_C
description: RuvB C-terminal winged helix domain

phrase: YTVDQLSAIVERTAEVFEVEIDSLAALEIARRARGTPRIANRLLRRVRDFAQVRGNGTVTMEITQMALELLQV
type: DOMAIN
name: AAA_lid_4
description: RuvB, AAA lid domain
Protein sequence:
MQRGKVKWFNNEKGYGFIEVEGGSDVFVHFTAIQGEGFKTLEEGQEVSFEIVQGNRGPQAANVVKL

Annotated regions:
phrase: RGKVKWFNNEKGYGFIEVEGGSDVFVHFTAIQGEGFKTLEEGQEVSFEIVQGNRGPQAANVV
type: DOMAIN
name: CSP_DNA-bd
description: Cold-shock protein Csp, DNA-binding

phrase: RGKVKWFNNEKGYGFIEVEGGSDVFVHFTAIQGEGFKTLEEGQEVSFEIVQGNRGPQAANVVK
type: DOMAIN
name: CSD
description: Cold-shock domain

phrase: YGFIEVEGGSDVFVHFTA
type: CONSERVED_SITE
name: CSD_CS
description: Cold-shock domain, conserved site

phrase: MQRGKVKWFNNEKGYGFIEVEGGSDVFVHFTAIQGEGFKTLEEGQEVSFEIVQGNRGPQAANVV
type: DOMAIN
name: CSP_DNA-bd
description: Cold-shock protein Csp, DNA-binding

phrase: GKVKWFNNEKGYGFI
type: DOMAIN
name: CSP_DNA-bd
description: Cold-shock protein Csp, DNA-binding

phrase: SDVFVHFTA
type: DOMAIN
name: CSP_DNA-bd
description: Cold-shock protein Csp, DNA-binding

phrase: KTLEEGQEVSFEIVQGNR
type: DOMAIN
name: CSP_DNA-bd
description: Cold-shock protein Csp, DNA-binding

phrase: QRGKVKWFNNEKGYGFIEVEGGSDVFVHFTAIQGEGFKTLEEGQEVSFEIVQGNRGPQAANVV
type: DOMAIN
name: CSP_DNA-bd
description: Cold-shock protein Csp, DNA-binding
Protein sequence:
MERIKELRDLMSQSRTREILTKTTVDHMAIIKKYTSGRQEKNPALRMKWMMAMKYPITADKRIMEMIPERNEQGQTLWSKTNDAGSDRVMVSPLAVTWWNRNGPTTSTVHYPKVYKTYFEKVERLKHGTFGPVHFRNQVKIRRRVDINPGHADLSAKEAQDVIMEVVFPNEVGARILTSESQLTITKEKKEELQDCKIAPLMVAYMLERELVRKTRFLPVAGGTSSVYIEVLHLTQGTCWEQMYTPGGEVRNDDVDQSLIIAARNIVRRATVSADPLASLLEMCHSTQIGGIRMVDILRQNPTEEQAVDICKAAMGLRISSSFSFGGFTFKRTSGSSVKREEEVLTGNLQTLKIRVHEGYEEFTMVGRRATAILRKATRRLIQLIVSGRDEQSIAEAIIVAMVFSQEDCMIKAVRGDLNFVNRANQRLNPMHQLLRHFQKDAKVLFQNWGIEPIDNVMGMIGILPDMTPSTEMSLRGVRVSKMGVDEYSSTERVVVSIDRFLRVRDQRGNVLLSPEEVSETQGTEKLTITYSSSMMWEINGPESVLVNTYQWIIRNWETVKIQWSQDPTMLYNKMEFEPFQSLVPKAARGQYSGFVRTLFQQMRDVLGTFDTVQIIKLLPFAAAPPEQSRMQFSSLTVNVRGSGMRILVRGNSPVFNYNKATKRLTVLGKDAGALTEDPDEGIAGVESAVLRGFLILGKEDKRYGPALSINELSNLAKGEKANVLIGQGDVVLVMKRKRDSSILTDSQTATKRIRMAIN

Annotated regions:
phrase: MERIKELRDLMSQSRTREILTKTTVDHMAIIKKYT
type: DOMAIN
name: Flu_PB2_N
description: Influenza RNA polymerase PB2, N-terminal region

phrase: VRNDDVDQSLIIAARNIVRRATVSADPLASLLEMCHSTQIGGIRMVDILRQNPTEEQAVDICKAAMGLR
type: DOMAIN
name: PB2_helical
description: Polymerase basic protein 2, helical domain

phrase: AGVESAVLRGFLILGKEDKRYGPALSINELSNLAKGEKANVLIGQGDVVLVMKRKRDSSILTDSQTATKRIRM
type: DOMAIN
name: Flu_PB2_C
description: Influenza RNA polymerase PB2, C-terminal domain

phrase: GRQEKNPALRMKWMMAMKYPITADKRIMEMIPERNEQGQTLWSKTNDAGSDRVMVSPLAVTWWNRNG
type: DOMAIN
name: Flu_PB2_2nd
description: Influenza RNA polymerase PB2, second domain

phrase: STVHYPKVYKTYFEKVERLKHGTFGPVHFRNQVKIRRRVDINPGHADLSAKEAQDVIMEVVFPNEVGARILTSESQLTITKEKKEELQDCKIAPLMVAYMLERELVRKTRFLPVAGGTSSVYIEVLHLTQGTCWEQMYTPG
type: DOMAIN
name: Flu_PB2_middle
description: Influenza RNA polymerase PB2, middle domain

phrase: YSSSMMWEINGPESVLVNTYQWIIRNWETVKIQWSQDPTMLYNKMEFEPFQSLVPKAARGQYSGFVRTLFQQMRDVLGTFDTVQIIKLLPFAAAPPEQSRMQFSSLTVNVRGSGMRILVRGNSPVFNYNKATKRLTVLGKDAGALTEDP
type: DOMAIN
name: Flu_PB2_6th
description: Influenza RNA polymerase PB2, sixth domain

phrase: SSSFSFGGFTFKRTSGSSVKREEEVLTGNLQTLKIRVHEGYEEFTMVGRRATAILRKATRRLIQLIVSGRDEQSIAEAIIVAMVFSQEDCMIKAVRGDLNFVNRANQRLNPMHQLLRHFQKDAKVLFQNWGIEPIDNVMGMIGILPDMTPSTEMSLRGVRVSKMGVDEYSSTERVVVSIDRFLRVRDQRGNVLLSPEEVSETQGTEKLTI
type: DOMAIN
name: Flu_PB2_CAP-bd
description: Influenza RNA polymerase PB2, CAP binding domain
Protein sequence:
MKIYLVGGAVRDALLGLPVKDKDWVVVGATPEEMLNAGYQQVGRDFPVFLHPKTREEYALARTERKAGLGYTGFTCYAAPDVTLEQDLLRRDLTINALAQDDEGHIIDAYGGKRDLQNRLLRHVSPAFSEDPLRVLRVARFAARYAHLSFRIADETLALMTAMTAAGELEHLTPERVWKETENALTTRNPQVFFQVLRDCGALKVLFPEIDALFGVPAPAKWHPEIDTGIHTLMTLSMAAMLSPEVDVRFATLCHDLGKGLTPKEFWPRHHGHGPAGVKLVEGICQRLRVPNDIRDLAKLVAEFHDLIHTFPILKPATIVKLFDNIDAWRKPQRVEQIALTSEADVRGRTGFEACDYSQGRLLREAWEIAKAVPTKDVVEAGFKGPEIREELTKRRVQAVADWKEKRCPQPKD

Annotated regions:
phrase: MKIYLVGGAVRDALLGLPVKDKDWVVVGATPEEMLNAGYQQVGRDFPVFLHPKTREEYALARTERKAGLGYTGFTCYAAPDVTLEQDLLRRDLTINALAQDDEGHIIDAYGGKRDLQ
type: DOMAIN
name: PolA_pol_head_dom
description: Poly A polymerase, head domain

phrase: GIHTLMTLSMAAMLSPEVDVRFATLCHDLGKGLTPKEFWPRHHGHGPAGVKLVEGICQRLRVPNDIRDLAKLVAEFHDLIHTFPILKPATIVKLFDNID
type: DOMAIN
name: HD_domain
description: HD domain

phrase: TGIHTLMTLSMAAMLSPEVDVRFATLCHDLGKGLTPKEFWPRHHGHGPAGVKLVEGICQRLRVPNDIRDLAKLVAEFHDLIHTFPILKPATIVKLFDNIDA
type: DOMAIN
name: HD_domain
description: HD domain

phrase: IYLVGGAVRDALLGLPVKDKDWVVVGATPEEMLNAGYQQVGRDFPVFLHPKTREEYALARTERKAGLGYTGFTCYAAPDVTLEQDLLRRDLTINALAQDDEGHIIDAYGGKRDLQNRLL
type: DOMAIN
name: PolA_pol_head_dom
description: Poly A polymerase, head domain

phrase: DTGIHTLMTLSMAAMLSPEVDVRFATLCHDLGKGLTPKEFWPRHHGHGPAGVKLVEGICQRLRVPNDIRDLAKLVAEFHDLIHTFPILKPATIVKLFDNIDAWRKPQRVEQIALTS
type: DOMAIN
name: HD/PDEase_dom
description: HD/PDEase domain

phrase: FRIADETLALMTAMTAAGELEHLTPERVWKETENALTTRNPQVFFQVLRDCGALKVLFPEID
type: DOMAIN
name: PolyA_RNA-bd
description: tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain

phrase: PEIDTGIHTLMTLSMAAMLSPEVDVRFATLCHDLGKGLTPKEFWPRHHGHGPAGVKLVEGICQRLRVPNDIRDLAKLVAEFHDLIHTFPILKPATIVKLFDNIDAWRKPQRVEQ
type: DOMAIN
name: HD/PDEase_dom
description: HD/PDEase domain
Protein sequence:
MSKKRLHEIAKEIGKSSKEVVEHAKYLGLDVKSHASSVEEADAKKIISSFSKASKPDVTASQTVKPKEVAQPSVTVVKETGSEHVEKTQVSKPKSRNFKAEREARAKEQAARKQANGSSHRSQERRGGYRQPNNHQTNEQGDKRITHRSQGDTNDKRIDRKASNVSPRHDNHQLVGDRNRSFAKENHKNGRFTNQKKQGRQEPQSKSPKIDFKARAAALKAEQNAEYSRQSETRFRAQQEAKRLAELARQEAKEAALKAQAEEMSHREAALKSIEEAETKLKSSNISAKSTADNRRKKQARPEKNRELTHHSQEGQKKNKKSWNSQNQVRNQKNSNWNKNKKTKKGKNVKNTNTAPKPVTERKFHELPKEFEYTEGMTVAEIAKRIKREPAEIVKKLFMMGVMATQNQSLDGDTIELLMVDYGIEAKAKVEVDDADIERFFEDENYLNPENIVERAPVVTIMGHVDHGKTTLLDTLRNSRVATGEAGGITQHIGAYQIEEAGKKITFLDTPGHAAFTSMRARGASVTDITILIVAADDGVMPQTIEAINHSKAAGVPIIVAINKIDKPGANPERVIAELAEYGIISTAWGGECEFVEISAKFNKNIDELLETVLLVAEVEELKADPTVRAIGTVIEARLDKGKGAIATLLVQQGTLHVQDPIVVGNTFGRVRAMVNDLGRRVKSAEPSTPVSITGLNETPMAGDHFAVYADEKAARAAGEERSKRALLKQRQNTQRVSLDNLFDTLKAGEIKTVNVIIKADVQGSVEALAASLVKIEVEGVRVNVVHSAVGAINESDVTLAEASNAVIIGFNVRPTPQARQQADTDDVEIRLHSIIYKVIEEVEEAMKGKLDPVYQEKVLGEAIIRETFKVSKVGTIGGFMVINGKVTRDSSVRVIRDSVVIFDGKLASLKHYKDDVKEVGNAQEGGLMIENFNDLKVDDTIEAYIMEEIVRK

Annotated regions:
phrase: PVVTIMGHVDHGKTTLLDTLRNSRVATGEAGGITQHIGAYQIEEAGKKITFLDTPGHAAFTSMRARGASVTDITILIVAADDGVMPQTIEAINHSKAAGVPIIVAINKIDKPGANPERVIAELAEYGIISTAWGGECEFVEISAKFNKNIDELLET
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: KQRQNTQRVSLDNLFDTLKAGEIKTVNVIIKADVQGSVEALAASLVKIEVEGVRVNVVHSAVGAINESDVTLAEASNAVIIGFNVRPTPQARQQADTDDVEIRLHSIIYKVIEEV
type: DOMAIN
name: TIF_IF2_dom3
description: Translation initiation factor IF- 2, domain 3

phrase: RAIGTVIEARLDKGKGAIATLLVQQGTLHVQDPIVVGNTFGRVRAMVNDLGRRVKSAEPSTPVSITGLNETPMAGDHFAVYADEKAARAAGEERS
type: DOMAIN
name: IF2_II
description: Translation initiation factor IF-2, domain II

phrase: PVVTIMGHVDHGKTTLLDTLRNSRVATGEAGGITQHIGAYQIEEAGKKITFLDTPGHAAFTSMRARGASVTDITILIVAADDGVMPQTIEAINHSKAAGVPIIVAINKIDKPGANPERVIAELAEYGIISTAWGGECEFVEISAKFNKNIDELLETVL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: AIGTVIEARLDKGKGAIATLLVQQGTLHVQDPIVVGNTFGRVRAMVNDLGRRVKSAEPSTPVSITGLNETPMAGDHFA
type: DOMAIN
name: EF-G-like_DII
description: Elongation factor G-like, domain II

phrase: ERAPVVTIMGHVDHGKTTLLDTLRNSRVATGEAGGITQHIGAYQIEEAGKKITFLDTPGHAAFTSMRARGASVTDITILIVAADDGVMPQTIEAINHSKAAGVPIIVAINKIDKPGANPERVIAELAEYGIISTAWGGECEFVEISAKFNKNIDELLETVLLVAEVEEL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: MSKKRLHEIAKEIGKSSKEVVEHAKYLGLDVKSHASSVEEADAKKIISS
type: DOMAIN
name: IF2_N
description: Translation initiation factor IF-2, N-terminal

phrase: TEGMTVAEIAKRIKREPAEIVKKLFMMGVMATQNQSLDGDTIELLMVDYGI
type: DOMAIN
name: IF2_N
description: Translation initiation factor IF-2, N-terminal
Protein sequence:
MPKHGKRYRALLEKVDPNKVYTIDEAARLVKELATAKFDETVEVHAKLGIDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKILDGWMDFDAVVATPDVMGAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGTFLRSVYVTTTMGPSVRINPHS

Annotated regions:
phrase: MGAVGSKLGRILGPRGLLP
type: CONSERVED_SITE
name: Ribosomal_uL1_CS
description: Large ribosomal subunit protein uL1, conserved site
Protein sequence:
MLVWLAEHLAKLYTGFNVFSYLTFRAIVSLLTALVISLWMGPHMIAWLQRLQIGQVVRNEGPESHFSKRGTPTMGGVMILVAIIVSVLMWANLSNPYVWCVLLVLAGYGAVGFVDDYRKVVRKDTKGLIARWKYFWQSVIALVVAFSMYAIGKDTPATQLVVPFFKDVMPQLGLLYVALAYFVIVGTSNAVNLTDGLDGLAIMPTVFVAAGFALVAWATGNMNFAGYLHIPYIRHASELVIVCTAIVGAGLGFLWFNTYPAQVFMGDVGSLALGGALGTIAVLLRQEFLLVIMGGVFVVETLSVILQVGSFKLRGQRIFRMAPIHHHYELKGWPEPRVIVRFWIISLMLVLIGLATLKVR

Annotated regions:
phrase: KRGTPTMGGVMI
type: CONSERVED_SITE
name: PNAcMuramoyl-5peptid_Trfase_CS
description: Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site

phrase: KRGTPTMGGVMI
type: CONSERVED_SITE
name: PNAcMuramoyl-5peptid_Trfase_CS
description: Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site

phrase: NAVNLTDGLDG
type: CONSERVED_SITE
name: PNAcMuramoyl-5peptid_Trfase_CS
description: Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site
Protein sequence:
MVAGILRSARRIVVKVGSSLVTNEGRGLDEAAIGEWSRQLAALVRGDAGAAREVVMVSSGAIAEGMKRLGWVGRPREIHALQAAAAVGQMGLAQMYETKLREQGMGSAQVLLTHADLADRERYLNARSTLLTLLRLGVVPVINENDTVVNDEIKFGDNDTLGALVANLVEADALIILTDQKGLYTADPRRDPSARLVRQAKAGDSALEAMAGGAGSSIGKGGMITKILAAKRAAGSGASTVIAWGREPDVLVRLVAGEALGSLLVAQTQKTQARKQWMADHLQLRGSVVVDAGAAAKLRAEGKSLLPIGMTAVEGDFARGDVIAVRDASGAEIARGLANYAAAEARMLCRKPSTEFEKLLGYSAEPEMVHRDNLVLAAGS

Annotated regions:
phrase: RIVVKVGSSLVTNEGRGLDEAAIGEWSRQLAALVRGDAGAAREVVMVSSGAIAEGMKRLGWVGRPREIHALQAAAAVGQMGLAQMYETKLREQGMGSAQVLLTHADLADRERYLNARSTLLTLLRLGVVPVINENDTVVNDEIKFGDNDTLGALVANLVEADALIILTDQKGLYTADPRRDPSARLVRQAKAGDSALEAMAGGAGSSIGKGGMITKILAAKRAAGSGASTV
type: DOMAIN
name: Asp/Glu/Uridylate_kinase
description: Aspartate/glutamate/uridylate kinase

phrase: SSIGKGGMITKILAAKR
type: CONSERVED_SITE
name: Glutamate_5-kinase_CS
description: Glutamate 5-kinase, conserved site

phrase: GSVVVDAGAAAKLRAEGKSLLPIGMTAVEGDFARGDVIAVRDASGAEIARGLANYAAAEARMLCRKPSTEFE
type: DOMAIN
name: PUA
description: PUA domain

phrase: RIVVKVGSSLVTNEGRGLDEAAIGEWSRQLAALVRGDAGAAREVVMVSSGAIAEGMKRLGWVGRPREIHALQAAAAVGQMGLAQMYETKLREQGMGSAQVLLTHADLADRERYLNARSTLLTLLRLGVVPVINENDTVVNDEIKFGDNDTLGALVANLVEADALIILTDQKGLYTADPRRDPSARLVRQAKAGDSALEAMAGGAGSSIGKGGMITKILAAKRAAGSGASTVIAWGREPDVLVRLVAGEALGSLL
type: DOMAIN
name: G5K_ProB
description: Glutamate-5-kinase domain

phrase: GSVVVDAGAAAKLRAEGKSLLPIGMTAVEGDFARGDVIAVRDASGAEIARGLANYAAAEARMLCRKPSTEFEKLLGYSAEPEM
type: DOMAIN
name: PUA
description: PUA domain
Protein sequence:
MSQPIYKRILLKLSGEALQGEDGLGIDPAILDRMAVEIKELVEMGVEVGVVLGGGNLFRGAKLAKAGMNRVVGDHMGMLATVMNGLAMRDSLFRADVNAKLMSAFQLNGICDTYNWSEAIKMLREKRVVIFSAGTGNPFFTTDSTACLRGIEIEADVVLKATKVDGVYDCDPAKNPDAKLYKNLTYAEVIDKELQVMDLSAFTLARDHGMPIRVFNMGKPGALRQVVTGTEEGTTIC

Annotated regions:
phrase: KRILLKLSGEALQGEDGLGIDPAILDRMAVEIKELVEMGVEVGVVLGGGNLFRGAKLAKAGMNRVVGDHMGMLATVMNGLAMRDSLFRADVNAKLMSAFQLNGICDTYNWSEAIKMLREKRVVIFSAGTGNPFFTTDSTACLRGIEIEADVVLKATKVDGVYDCDPAKNPDAKLYKNLTYAEVIDKELQVMDLSAFTLARDHGMPIRVF
type: DOMAIN
name: Asp/Glu/Uridylate_kinase
description: Aspartate/glutamate/uridylate kinase
Protein sequence:
MGGKWSKSSKAGWPAVRERIRRTEPAAEGVGPASQDLDKYGALTSSNTAHNNDACAWLEAQEEEEVGFPVRPQVPLRPMTYKEAFDLGFFLKEKGGLEGLIHSKKRQEILDLWVYHTQGFFPDWQNYTPGPGVRYPLTFGWCFKLVPVDPREVEEANKGENNSLLHPICQHGMEDEHGEVLMWKFDSSLARRHMARELHPEYYKDC

Annotated regions:
Protein sequence:
MLQKPRGTQDFFLDETKLWIKVETKLREILNKFNYSEIRTPMFESKELFIRSIGSTSDIVSKEMYEFVDKKNRSLVLKPEGTASVVRAVVENKLYAEDYLPFKTYYISPMFRYERPQNGRYRQFHQLGIEVYGSDSIQQDYEVLNIANNIINDFKLNKNIKIYTNYLITGKNREQYILELKKYLTDFKLCNDCNIRIEKNPLRVLDCKIDDKQFNNVPSMKDFLTDEEQKRYQQTLDLFKEMNISTIHDDKLVRGLDYYTGFIFEIKYEAKNIEQTIIAGGRYNNLVYEIGNINLPACGFGMGLERFINIIKEQNNKLNKNDQSIDLYTICLDQSAIKLNQQILELSRSIGLISDSNYYNMSLKSALKKSDKLNPKYLIILGEKEATSNQFIIKNKINKTEIKTTLTNFVNDLK

Annotated regions:
phrase: ETKLWIKVETKLREILNKFNYSEIRTPMFESKELFIRSIGSTSDIVSKEMYEFVDKKNRSLVLKPEGTASVVRAVVENKLYAEDYLPFKTYYISPMFRYERPQNGRYRQFHQLGIEVYGSDSIQQDYEVLNIANNIINDFKLNKNIKIYTNYLITGKNREQYILELKKYLTDFKLCNDCNIRIEKNPLRVLDCKIDDKQFNNVPSMKDFLTDEEQKRYQQTLDLFKEMNISTIHDDKLVRGLDYYTGFIFEIKYEAKNIEQTIIAGGRYNNLVYEIGNINLPACGFGMGLERFINII
type: DOMAIN
name: HisRS-like_core
description: Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain

phrase: GTQDFFLDETKLWIKVETKLREILNKFNYSEIRTPMFESKELFIRSIGSTSDIVSKEMYEFVDKKNRSLVLKPEGTASVVRAVVENKLYAEDYLPFKTYYISPMFRYERPQNGRYRQFHQLGIEVYGSDSIQQDYEVLNIANNIINDFK
type: DOMAIN
name: HisRS-like_core
description: Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain

phrase: EQKRYQQTLDLFKEMNISTIHDDKLVRGLDYYTGFIFEIKYEAKNIEQTIIAGGRYNNLVYEIGNINLPACGFGMGLE
type: DOMAIN
name: HisRS-like_core
description: Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain

phrase: RGTQDFFLDETKLWIKVETKLREILNKFNYSEIRTPMFESKELFIRSIGSTSDIVSKEMYEFVDKKNRSLVLKPEGTASVVRAVVENKLYAEDYLPFKTYYISPMFRYERPQNGRYRQFHQLGIEVYGSDSIQQDYEVLNIANNIINDFKLNKNIKIYTNYLITGKNREQYILELKKYLTDFKLCNDCNIRIEKNPLRVLDCKIDDKQFNNVPSMKDFLTDEEQKRYQQTLDLFKEMNISTIHDDKLVRGLDYYTGFIFEIKYEAKNIEQTIIAGGRYNNLVYEIGNINLPACGFGMGLERFINI
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II
Protein sequence:
MGTGNQTWVREFVLLGLSSDWDTEVSLFVLFLITYMVTVLGNFLIILLIRLDSRLHTPMYFFLTNLSLVDVSYATSIIPQMLAHLLAAHKAIPFVSCAAQLFFSLGLGGIEFVLLAVMAYDRYVAVCDPLRYSVIMHGGLCTRLAITSWVSGSMNSLMQTVITFQLPMCTNKYIDHISCELLAVVRLACVDTSSNEIAIMVSSIVLLMTPFCLVLLSYIQIISTILKIQSTEGRKKAFHTCASHLTVVVLCYGMAIFTYIQPRSSPSVLQEKLISLFYSVLTPMLNPMIYSVRNKEVKGAWQKLLGQLTGITSKLAT

Annotated regions:
phrase: GNFLIILLIRLDSRLHTPMYFFLTNLSLVDVSYATSIIPQMLAHLLAAHKAIPFVSCAAQLFFSLGLGGIEFVLLAVMAYDRYVAVCDPLRYSVIMHGGLCTRLAITSWVSGSMNSLMQTVITFQLPMCTNKYIDHISCELLAVVRLACVDTSSNEIAIMVSSIVLLMTPFCLVLLSYIQIISTILKIQSTEGRKKAFHTCASHLTVVVLCYGMAIFTYIQPRSSPSVLQEKLISLFYSVLTPMLNPMI
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM
Protein sequence:
MAAFRAAHRLLGHILRNESSAGLVTQRWSSSAAVASVPKSSDPKPHAQPDKRKPKTGILMLNMGGPETLDDVHGFLLRLFLDKDLMTLPAQSKLAPFIAKRRTPKIQEQYSKIGGGSPIKKWTEQQGEGMVKLLDELSPATAPHKYYIGFRYVRPLTEAAIEEMERDGVERAIAFTQYPQYSCSTTGSSLNAIYRYYNAKGTQPKMKWSVIDRWPTHPLLIQCFADHIQKELNMFPADKRGEVVILFSAHSLPMSVVNRGDPYPQEVGATVQKVMERLGFSNPYRLVWQSKVGPMAWLGPQTDESIKGLCQRGKKNILLVPIAFTSDHIETLYELDIEYAQVLAKECGVENIRRSESLNGNPLFSKALADLVLSHMKSSEICSKQLSLRCPMCVNPVCGEAKSFFTKQQQQ

Annotated regions:
phrase: TGILMLNMGGPETLDDVHGFLLRLFLDKDLMTLPAQSKLAPFIAKRRTPKIQEQYSKIGGGSPIKKWTEQQGEGMVKLLDELSPATAPHKYYIGFRYVRPLTEAAIEEMERDGVERAIAFTQYPQYSCSTTGSSLNAIYRYYNAKGTQPKMKWSVIDRWPT
type: DOMAIN
name: Ferrochelatase_N
description: Ferrochelatase, N-terminal

phrase: ILFSAHSLPMSVVNRGDP
type: ACTIVE_SITE
name: Ferrochelatase_AS
description: Ferrochelatase, active site

phrase: QCFADHIQKELNMFPADKRGEVVILFSAHSLPMSVVNRGDPYPQEVGATVQKVMERLGFSNPYRLVWQSKVGPMAWLGPQTDESIKGLCQRGKKNILLVPIAFTSDHIETLYELDIEYAQVLAKECGVENIRRSESL
type: DOMAIN
name: Ferrochelatase_C
description: Ferrochelatase, C-terminal
Protein sequence:
MASWLPETLFETVGQGPPPSKDYYQLLVTRSQVIYRWWKISLRSEYRSTKPGEAKETHEDFLENSHLQGQTALIFGARILDYVINLCKGKFDFLERLSDDLLLNIISYLDLEDIARLCQTSHRFAKLCMSDKLWEQIVQSTCDTITPDVRALAEDTGWRQLFFTNKLQLQRQLRKRKQKYGNLREKQP

Annotated regions:
phrase: LSDDLLLNIISYLDLEDIARLCQTSHRFAKLCMSDKLWEQ
type: DOMAIN
name: F-box_dom
description: F-box domain

phrase: FDFLERLSDDLLLNIISYLDLEDIARLCQTSHRFAKLCMSDKLWEQ
type: DOMAIN
name: F-box_dom
description: F-box domain

phrase: DDLLLNIISYLDLEDIARLCQTSHRFAKLCMSDKLWEQIV
type: DOMAIN
name: F-box_dom
description: F-box domain