nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
ASPTSPKVFPLSLCSTQPDGDVVVACLVQGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCPDGKSVTCHVNHYTNPSQDVTVPCRVPSTPPTPSPSTPPTPSPPCCHPRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTWTPSSGKSAVEGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTPLTATLSKSGNMFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALPLAFTQKTIDRLAGKPTHVNVSVVMAEVDGTCY

Annotated regions:
phrase: FSCMVG
type: CONSERVED_SITE
name: Ig/MHC_CS
description: Immunoglobulin/major histocompatibility complex, conserved site

phrase: PRLSLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTWTPSSGKSAVEGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTPLTATL
type: DOMAIN
name: Ig-like_dom
description: Immunoglobulin-like domain

phrase: PKVFPLSLCSTQPDGDVVVACLVQGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCPDGKSVTCHVNHYTNPSQDV
type: DOMAIN
name: Ig-like_dom
description: Immunoglobulin-like domain

phrase: PEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALPLAFTQKTI
type: DOMAIN
name: Ig-like_dom
description: Immunoglobulin-like domain

phrase: VFPLSLCSTQPDGDVVVACLVQGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCPDGKSVTCHVNHY
type: DOMAIN
name: Ig_C1-set
description: Immunoglobulin C1-set

phrase: VHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEA
type: DOMAIN
name: Ig_C1-set
description: Immunoglobulin C1-set

phrase: DVVVACLVQGFFPQEPLSVTWSESGQGVTARNFPPSQDASGDLYTTSSQLTLPATQCPDGKSVTCHVNHYTNPS
type: DOMAIN
name: Ig_C1-set
description: Immunoglobulin C1-set

phrase: LVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVTSILRVAAEDWKKGDTFSCMVGHEALPL
type: DOMAIN
name: Ig_C1-set
description: Immunoglobulin C1-set

phrase: DLLLGSEANLTCTLTGLRDASGVTFTWTPSSGKSAVEGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTP
type: DOMAIN
name: Immunoglobulin_dom
description: Immunoglobulin-like beta-sandwich domain
Protein sequence:
MRVVLATRNRHKIVELRRILAGAGLDVDLAGLDVFPDVPDVPETGATFAENALIKAHAVARATGLPAIADDSGIAVDALNGMPGVLSARWSGRHGEDRANLDLLLAQTGDVPDERRGAWFVCAAAAARPDGAERVVEGVLAGSLAHKPRGEGGFGYDPIFVPEGESRTTAELSPAEKDAISHRGRAFRALVPELRALLEG

Annotated regions:
Protein sequence:
MAKDDVIEIEGKVTDTLPNAMFKVELENGAVILAHVSGKIRKNYIKILPGDRVTVELSPYDLTKGRITYRFK

Annotated regions:
phrase: MAKDDVIEIEGKVTDTLPNAMFKVELENGAVILAHVSGKIRKNYIKILPGDRVTVELSPYDLTKGRITYRF
type: DOMAIN
name: RNA-binding_domain_S1_IF1
description: RNA-binding domain, S1, IF1 type

phrase: DDVIEIEGKVTDTLPNAMFKVELENGAVILAHVSGKIRKNYIKILPGDRVTVELSPYDLTKGRITYRF
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: IEIEGKVTDTLPNAMFKVELENGAVILAHVSGKIRKNYIKILPGDRVTVELSPYDLTKGRITY
type: DOMAIN
name: RNA-binding_domain_S1_IF1
description: RNA-binding domain, S1, IF1 type
Protein sequence:
MKLCGVRGSGVSLMRSSNFPCFRAAHNGGAPTATRHQSLCGRCLDSHMGAGKRWCFRPLLAEPRRYGSASSASTTDAATAPVHGEDLYVSHYAIPEDARRLVGTPQLLPRNPAEEVAFKKNLIRSFPQACIRNVSVVAHVDHGKTTLSDAMLRFSNLLPADGATGTFTDRLKVEKERGITIKAQTCSVLLTVRETGTQYLVNLIDTPGHVDFQYEVSRSLCASEGAALLVDVRQGVEAQTMAQFYAALEQNLTILPVLTKMDNVMSDAEVEKTLLQLEDSTGLLSREVILTSAKSKQGIEQLFQQIIDKVPPPRGREGFSDMKQLPAMHPDSADRKKVEKELVPLRALLFDCWTSESSGMTDGAASAPVSTVSSVSSGTTAASGGQSVAKDGIYGLIRVMDGTVTPGTTVTFFHSGKKHEVREVGIIHPTLHPTAALTAGMVGFVFFPGLLKKDVFIGDTLCTLPTRKHTMRVVATGPPETASRTKPATAAETASSDDASGSSGSSVVEPIPGFKTVQPVVFAGFYPDEGVYITQLREAVDLLCVNDPSVTVEQLQCPALGPGLQLGFLGFLHMQVFKERLLMEFGQTVLVTPPQVQYMYVEQHGDPDDPAQRKPVSVSNWRWPHEGVGAYLEPFITATVLTPSEYLNEINSAALSAFRGEMQEMRVIDGARTLVRYRMPLADLARGFFSTVKSSSHGYATLEYDDPTYMTADLVKMDIVINKAHISALSTICLRHEATTHARRIIGSLKENLLRSSVDLPLQALVGSKIIARETVKAYRKDVTAKIHAGDISRKQKKWNDQKKGKERMARRSVGTVTLDQSVLAAALGATTAR

Annotated regions:
phrase: YLEPFITATVLTPSEYLNEINSAALSAFRGEMQEMRVIDGARTLVRYRMPLADLARGFFSTVKSSSHGYATLEYDDPTYMTADLVKM
type: DOMAIN
name: EFG_V-like
description: Elongation factor EFG, domain V-like

phrase: INKAHISALSTICLRHEATTHARRIIGSLKENLLRSSVDLPLQALVGSKIIARETVKAYRKDVTAKIHAGDISRKQKKWNDQKKGKERMARRSVGTVTLDQSVLAAA
type: DOMAIN
name: LepA_CTD
description: GTP-binding protein LepA, C-terminal

phrase: NVSVVAHVDHGKT
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: ERGITIKA
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: NLIDTPGHVD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: EPFITATVLTPSEYLNEINSAALSAFRGEMQEMRVIDGARTLVRYRMPLADLARGFFSTVKSSSHGYATLEYDDPTYMTA
type: DOMAIN
name: LepA_IV
description: Elongation factor 4, domain IV

phrase: ACIRNVSVVAHVDHGKTTLSDAMLRFSNLLPADGATGTFTDRLKVEKERGITIKAQTCSVLLTVRETGTQYLVNLIDTPGHVDFQYEVSRSLCASEGAALLVDVRQGVEAQTMAQFYAALEQNLTILPVLTKMDNVMSDAEVEKTLLQLEDSTGLLSREVILTSAKSKQGIEQLFQQIIDKVPPP
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: RNVSVVAHVDHGKTTLSDAMLRFSNLLPADGATGTFTDRLKVEKERGITIKAQTCSVLLTVRETGTQYLVNLIDTPGHVDFQYEVSRSLCASEGAALLVDVRQGVEAQTMAQFYAALEQNLTILPVLTKMDNVMSDAEVEKTLLQLEDSTGLLSREVILTSAKSKQGIEQLFQ
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: IRNVSVVAHVDHGKTTLSDAMLRFSNLLPADGATGTFTDRLKVEKERGITIKAQTCSVLLTVRETGTQYLVNLIDTPGHVDFQYEVSRSLCASEGAALLVDVRQGVEAQTMAQFYAALEQNLTILPVLTKMDNVMSDAEVEKTLLQLEDSTGLLSREVILTSAKSKQGIEQLFQQIIDKVP
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain
Protein sequence:
MICPIFFLYIINVLFTQYFIKCEGNKVTVISHNNGHNDNLDVNKNGVISQENVFDTSESLNLPSNKKVGSDDLNTTTISFTVPDNLENEVKVVSSSESGKGATVSHTKVTSEGLSDTQPNVTQSVSSSTHTPGSLDSTMSTEQHSSVSQSSLPTESSSETLNKATVPEIPIQINSGLLKNYNGVKVTGSCGSYFRVYLVPHILIYALTKYSVIQLESLFNDNARIDVEHKGELQNKCSEGYHFKLVVYITHNVLNLKWKTYKPNEESKSEDSDVRKYRIPKLERPFTSIQVYTANSKAGVIETKNYNIRTDIPDTCDAIATDCFLNGNVNIEKCFQCTLLVQKKDKSHECFKYVSSEMKKKMNEIKVKAQDDFNPNEYKLIESIDNILSKIYKKANKPFEISKDLINLEDLDYQFKNELLEYCKLLKKVDTSGTLEEYELGNAEDIYNNLTRLLKSHSDENIVTLQGKLRNTAICIKNVDEWILNKRGLTLPSESPSESSSKSDSYLNTFNDKDKNEDKDDMSKNSKEEFKNDDKENSDDQNNNDSNKKDDENNINNGDTNYVYDFDDDDYDNNSYEKDMYESPIKENKNGVIDLEKYGNQIKLKSPYFKNSKYCNYEYCNRWRDKTSCISQIEVEEQGNCGLCWIFASKLHFETIRCMRGYGHFRSSALYVANCSKRKPIDRCEEGSNPLEFLRILDEKKFLPLESNYPYSYTSAGNSCPKLPNSWTNLWGDTKLLFNKKVHRYIGNKGFISHETSYFKNNMDLFIDMVKREVQNKGSVIIYIKTQDVIGYDFNGKGVHSMCGDRTPDHAANIIGYGNYINKKGEKRSYWLIRNSWSYYWGDEGNFRVDMLGPKNCLYNFIHTVVFFKLDLGTIHVPKKKSWKKNVYFLRHNPDFMYSLYYNNYEPETSQDFESENDYDNAFVHGQSNESDETNKEGKNVHNSVEKKIQILHILKHIKDSQIKRGLVKYDNINETKDEHTCSRVNSQDAEKYEECKKFCLTKWNECKDHYSPGYCLTDLYKGEDCNFCYV

Annotated regions:
phrase: YEYCNRWRDKTSCISQIEVEEQGNCGLCWIFASKLHFETIRCMRGYGHFRSSALYVANCSKRKPIDRCEEGSNPLEFLRILDEKKFLPLESNYPYSYTSAGNSCPKLPNSWTNLWGDTKLLFNKKVHRYIGNKGFISHETSYFKNNMDLFIDMVKREVQNKGSVIIYIKTQDVIGYDFNGKGVHSMCGDRTPDHAANIIGYGNYINKKGEKRSYWLIRNSWSYYWGDEGNFRVDMLGPKNCLYNFIHTVVF
type: DOMAIN
name: Peptidase_C1A_C
description: Peptidase C1A, papain C-terminal

phrase: WRDKTSCISQIEVEEQGNCGLCWIFASKLHFETIRCMRGYGHFRSSALYVANCSKRKPIDRCEEGSNPLEFLRILDEKKFLPLESNYPYSYTSAGNSCPKLPNSWTNLWGDTKLLFNKKVHRYIGNKGFISHETSYFKNNMDLFIDMVKREVQNKGSVIIYIKTQDVIGYDFNGKGVHSMCGDRTPDHAANIIGYGNYINKKGEKRSYWLIRNSWSYYWGDEGNFRVDM
type: DOMAIN
name: Peptidase_C1A_C
description: Peptidase C1A, papain C-terminal

phrase: QGNCGLCWIFA
type: ACTIVE_SITE
name: Pept_cys_AS
description: Cysteine peptidase, cysteine active site
Protein sequence:
MSSKKTEAPRKIAADNRRARFDFEIGETFEAGVMLTGTEVKSLRTGKATIGESYAAQKAGEMWLYNAYIPEYLEANRFNHETRRPRKLLLHKRQIAKLGHAVEREGMTVVALKIYFNDQGRAKVELALAKGKKAHDKREASKERDWARDKARLMRDRG

Annotated regions:
phrase: AGVMLTGTEVKS
type: CONSERVED_SITE
name: SsrA-bd_prot_CS
description: SsrA-binding protein, conserved site
Protein sequence:
MTTISAALPSGRLLEDSKAFLKKIGINVKEPAKRELISYENGYAFYFPRAFDVPVYVENGVDIGICGSDVVLERNNEVYIPLELPFGKCRMSIILPENREISFQNMEGYKIATKYPEITKNFFSEKGLKVKILKLNGAVELAAKTGIADAIVDIVDTGNTIKANNLKEAYKIMDISAVLLVNRITQKTKFDFINDLINKAKNYKNGVKGH

Annotated regions:
phrase: RAFDVPVYVENGVDIGICGSDVVLERNNEVYIPLELPFGKCRMSIILPENREISFQNMEGYKIATKYPEITKNFFSEKGLKVKILKLNGAVELAAKTGIADAIVDIVDTGNTIKANNLKEAYKIMDISAVLLVNRITQKTKFDFINDLIN
type: DOMAIN
name: ATP_PRibTrfase_cat
description: ATP phosphoribosyltransferase, catalytic domain

phrase: ELAAKTGIADAIVDIVDTGNT
type: CONSERVED_SITE
name: ATP_PRibTrfase_CS
description: ATP phosphoribosyltransferase, conserved site

phrase: AALPSGRLLEDSKAFLKKIGINVKEPAKRELISYENGYAFYFPRAFDVPVYVENGVDIGICGSDVVLERNNEVYIPLELPFGKCRMSIILPENREISFQNMEGYKIATKYPEITKNFFSEKGLKVKILKLNGAVELAAKTGIADAIVDIVDTGNTIKANNLKEAYKIMDISAVL
type: DOMAIN
name: ATP_PRibTrfase_cat
description: ATP phosphoribosyltransferase, catalytic domain
Protein sequence:
MKVAVVGATGMVGNVMLKVLEERNFPFTDLILVASERSVGKQISYKGTDYTVIGLQDAVDLKPEIALFSAGGTTSEIWAPKFAEAGTTVIDNSSAWRMDPTKKLVVPEINGDVLTKDDKIIANPNCSTIQLVMALAPLHKKYIMKRVVISTYQSVSGTGVKAVQQLENEENGIKGEMAYHYPISRNAIPHCDVFLENGYTKEEMKLVKEPKKILNDKSFTVTATAVRIPTAGGHSEAVNVQFENDFNESDVRKLLNETSGVVVQDNLDTNTYPMPIYAHNKDDVFVGRIRRDESQSKTLNMWIVSDNLRKGAATNAIQIAEYLIKNNLV

Annotated regions:
phrase: LAPLHKKYIMKRVVISTYQSVSGTGVKAVQQLENEENGIKGEMAYHYPISRNAIPHCDVFLENGYTKEEMKLVKEPKKILNDKSFTVTATAVRIPTAGGHSEAVNVQFENDFNESDVRKLLNETSGVVVQDNLDTNTYPMPIYAHNKDDVFVGRIRRDESQSKTLNMWIVSDNLR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: KVAVVGATGMVGNVMLKVLEERNFPFTDLILVASERSVGKQISYKGTDYTVIGLQDAVDLKPEIALFSAGGTTSEIWAPKFAEAGTTVIDNSSAWRMDPTKKLVVPEINGDVLTK
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: KVAVVGATGMVGNVMLKVLEERNFPFTDLILVASERSVGKQISYKGTDYTVIGLQDAVDLKPEIALFSAGGTTSEIWAPKFAEAGTTVIDNSSAWRMDPTKKLVVPEINGDV
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MNWQDPLVKKFLYLIVAMVILCPLGILLVWNYGDAWGEWGPEDVAEKVGEDKVSGLLHLADIWSYAPLPDYDIPGWDDPFHASIGYIISAIVGVILCVGAYYALIKIVNPKAAAG

Annotated regions:
phrase: LYLIVAMVILCPLGILLVWNYGDAWGEWGPEDVAEKVGEDKVSGLLHLADIWSYAPLPDYDIPGWDDPFHASIGYIISAIVGVILCVGAYYALIKI
type: DOMAIN
name: PDGLE_dom
description: PDGLE domain
Protein sequence:
MGKPITLSWEAITEKALKNERITLQEGLDILEADDRELLSIMHAAYQVRFHFFQNKVKLNMIFNAKSGYCPENCGYCSQSIISNAPVERYTMLDQKTIVAGAREALKRKAGTYCIVASGRAPSHRELDEVTAAVKEITETMPLKVCACLGLLNEDKAKRLKEAGVHRYNHNINTHQDHHPHITTTHTYHDRLSTLKKVKQSGMSPCSGVIIGMGETNQQIVEMAFALRAIDADSIPVNFLHAIEGTPLEHQERTHPIKALKVLALMRFVNPTKEIRVSGGREFNLRTLQPLALYAANSIFVGDYLTTKGQQVQTDHHIIEDLGFDIEECAL

Annotated regions:
phrase: GYCPENCGYCSQSIISNAPVERYTMLDQKTIVAGAREALKRKAGTYCIVASGRAPSHRELDEVTAAVKEITETMPLKVCACLGLLNEDKAKRLKEAGVHRYNHNINTHQDHHPHITTTHTYHDRLSTLKKVKQSGMSPCSGVIIGMGETNQQIVEM
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: PVNFLHAIEGTPLEHQERTHPIKALKVLALMRFVNPTKEIRVSGGREFNLRTLQPLALYAANSIFVGDYLTTKGQQVQTDHHIIEDLGFD
type: DOMAIN
name: BATS_dom
description: Biotin and thiamin synthesis-associated domain

phrase: PVNFLHAIEGTPLEHQERTHPIKALKVLALMRFVNPTKEIRVSGGREFNLRTLQPLALYAANSIFVGDYLTTKGQQVQTDHHIIEDLG
type: DOMAIN
name: BATS_dom
description: Biotin and thiamin synthesis-associated domain

phrase: NMIFNAKSGYCPENCGYCSQSIISNAPVERYTMLDQKTIVAGAREALKRKAGTYCIVASGRAPSHRELDEVTAAVKEITETMPLKVCACLGLLNEDKAKRLKEAGVHRYNHNINTHQDHHPHITTTHTYHDRLSTLKKVKQSGMSPCSGVIIGMGETNQQIVEMAFALRAIDADSIPVNFLHAIEGTPLEHQERTHPIKALKVLALMR
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: FFQNKVKLNMIFNAKSGYCPENCGYCSQSIISNAPVERYTMLDQKTIVAGAREALKRKAGTYCIVASGRAPSHRELDEVTAAVKEITETMPLKVCACLGLLNEDKAKRLKEAGVHRYNHNINTHQDHHPHITTTHTYHDRLSTLKKVKQSGMSPCSGVIIGMGETNQQIVEMAFALRAIDADSIPVNFLHAIEGTPLEHQERTHPIKALKVLALMRFVNPTKEIRVSGG
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MKINTIEEVVKALKNGEIIIVTDDPDRENEGDFICAAEFASPENINMMAKYARGLICMPMSKFYGEKLGLPQMVNENTDNHSTAFTVSIDHKDTSTGISAYERSLTAIKTTEDSASPEDFRRPGHMFPLIARTGGVLVRRGHTEGTVDLLKIAGLKEIGLCCEIMAEDGHMLRGKDIFALAEKFNMKITTIDAIAKYRKKHEKMVRKIAVAKLPTKYGEFTAHAYLDTITGEHHVALVKGNIGDGKNLLCRVHSECLTGDAFGSLRCDCGNQLQLAMKRINEEGRGILLYMRQEGRGIGLLNKIRAYALQDQGMDTVEANLALGFPEDMRDYSKGAQILQDLGVHELRLLTNNPDKVYSLEEYGMEIKERVPIEIKSNEVDRFYLKTKAKKMKHILKEFEEEK

Annotated regions:
phrase: AVAKLPTKYGEFTAHAYLDTITGEHHVALVKGNIGDGKNLLCRVHSECLTGDAFGSLRCDCGNQLQLAMKRINEEGRGILLYMRQEGRGIGLLNKIRAYALQDQGMDTVEANLALGFPEDMRDYSKGAQILQDLGVHELRLLTNNPDKVYSLEEYGMEIKERV
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MMQPVINAPEIATAREQQLFNGKNFHVFIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHHQSFYEFGATRILNVGISKRFFEQHYLPLLPYCFVASQVYRTNNAFLTYVETVISSLNFRETGLEEFVEMVTFYVINRLRHYREEQVIDDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRKKLTEFNQ

Annotated regions:
phrase: KSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYR
type: DOMAIN
name: HTH_AraC
description: DNA binding HTH domain, AraC-type

phrase: DDVPQWLKSTVEKMHDKEQFSESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSYRK
type: DOMAIN
name: HTH_AraC
description: DNA binding HTH domain, AraC-type

phrase: FIYNKTESISGLHQHDYYEFTLVLTGRYFQEINGKRVLLERGDFVFIPLGSHH
type: DOMAIN
name: Cupin_2
description: Cupin 2, conserved barrel

phrase: VTDIAFEAGYSSPSL
type: DOMAIN
name: Tscrpt_reg_AraC-type_HTH
description: Transcription regulator HTH, AraC- type, HTH domain

phrase: FIKTFKKLTSFTPKSY
type: DOMAIN
name: Tscrpt_reg_AraC-type_HTH
description: Transcription regulator HTH, AraC- type, HTH domain

phrase: ESALENMVALSAKSQEYLTRATQRYYGKTPMQIINEIRINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFTPKSY
type: DOMAIN
name: HTH_AraC
description: DNA binding HTH domain, AraC-type

phrase: RINFAKKQLEMTNYSVTDIAFEAGYSSPSLFIKTFKKLTSFT
type: CONSERVED_SITE
name: HTH_AraC-typ_CS
description: HTH domain AraC-type, conserved site
Protein sequence:
MEQKQRRFTKNIFVLDVTAKTLCGAIAKLSSQPYCQIKIGRVVAFKPVKNPEPKGYVLNVPGPGAYRIQDGQDIISLMLTPHGVEATTERWEEWKFEGVSVTPMATRVQYNGVMVDAEIKYCKGMGIVQPYMRNDFDRNEMPDLPGVMRSNYDIRELRQKIKNERESAPRLQVHSVAPREESRWMDDDEAKVDDEAKEIVPGTSGLEKLREARSNVFKEVEAVINWNLDERDEGDRDERGDEEQVKTLSDDDDQGEDASDDEHPKTHITKEYIEKVAKQIKLKDERFMSLSSAMPQASGGFDRMIVTKKLKWQNVPLYCFDESLKRYELQCVGACERVAFVSKDMSLIICRSAFRRL

Annotated regions:
Protein sequence:
MLSRSDLLTLLTINFIVVTKGAERISEVSARFTLDAMPGKQMAIDADLNAGLINQAQAQTRRKDVASEADFYGAMDGASKFVRGDAIAGMMILAINLIGGVCIGIFKYNLSADAAFQQYVLMTIGDGLVAQIPSLLLSTAAAIIVTRVSDNGDIAHDVRNQLLASPSVLYTATGIMFVLAVVPGMPHLPFLLFSALLGFTGWRMSKQPLAAEAEEKSLETLTRTITETSEQQVSWETIPLIEPISLSLGYKLVALVDKAQGNPLTQRIRGVRQVISDGNGVLLPEIRIRENFRLKPSQYAIFINGIKADEADIPADKLMALPSSETYGEIDGVQGNDPAYGMPVTWIQAAQKAKALNMGYQVIDSASVIATHVNKIVRSYIPDLFNYDDITQLHNRLSSTAPRLAEDLSAALNYSQLLKVYRALLTEGVSLRDIVTIATVLVASSTVTKDHILLAADVRLALRRSITHPFVRKQELTVYTLNNELENLLTNVVNQAQQGGKVMLDSVPVDPNMLNQFQSTMPQVKEQMKAAGKDPVLLVPPQLRPLLARYARLFAPGLHVLSYNEVPDELELKIMGALM

Annotated regions:
phrase: RISEVSARFTLDAMPGKQMAIDA
type: CONSERVED_SITE
name: FHIPEP_CS
description: FHIPEP conserved site
Protein sequence:
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWXTMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPQMITLNDQTHLLKQSGEIKSWKSLDLYKLIKKIWLLYFELEYQRLHSSFNKAKVKMWKDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE

Annotated regions:
phrase: PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWXTMSAKEKGKFEDMAKADKARYEREMKT
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain

phrase: PRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWXTMSAKEKGKFEDMAKADKARYEREMKTY
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain

phrase: KPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWXTMSAKEKGKFEDMAKADKARYEREMKTYI
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain
Protein sequence:
MITYTKPLSKLIGHFEKFPGIGPRTAQRLALFILKQPESTIREFSKALLEAHSNVGRCKKCFNLTSEDECEICRNTERNQKLICVVAETKDLLALERAREFKGVYHVIGGLISPMDSVGPELLEIRSLVERVSKSEIDEIILALTPSVEGDTTSLYIGKLLAPFTKVTRIAYGLPMGSELEYVDEVTLARALEGRTKLN

Annotated regions:
phrase: LICVVAETKDLLALERAREFKGVYHVIGGLISPMDSVGPELLEIRSLVERVSKSEIDEIILALTPSVEGDTTSLYIGKLLAPFTKVTRI
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: KLICVVAETKDLLALERAREFKGVYHVIGGLISPMDSVGPELLEIRSLVERVSKSEIDEIILALTPSVEGDTTSLYIGKLLAPFT
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: KLICVVAETKDLLALERAREFKGVYHVIGGLISPMDSVGPELLEIRSLVERVSKSEIDEIILALTPSVEGDTTSLYIGKLLAPFTKVTRIAYGLPMGSELEYVDEVTLAR
type: DOMAIN
name: TOPRIM_RecR
description: RecR, TOPRIM domain

phrase: VGRCKKCFNLTSEDECEICR
type: DOMAIN
name: Rcmb_RecR_Znf
description: Recombination protein RecR, zinc finger domain

phrase: CKKCFNLTSEDECEICRNTER
type: DOMAIN
name: Rcmb_RecR_Znf
description: Recombination protein RecR, zinc finger domain

phrase: KLICVVAETKDLLALERAREFKGVYHVIGGLISPMDSVGPELLEIRSLVERVSKSEIDEIILALTPSVEGDTTSLYIGKLLAPFTKVTRIAYGL
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain
Protein sequence:
MSDRGKCQYPDDVDVIREREYPLLKDTTYLDHAGTTLYAKSLIESFSRDLTSNLYGNPHSMSAPSQLSTQRVDDIRLRALRFFSADPEEFDLVFVANATAAIKLVADSFRESTPQGFWYGYHVDSHTSLVGARELAGIGSRCFVTDAEVESWISQLDTEPVQGPRLFAYPAQSNMNGRRFPRGWCGRIRESAKDTYTLLDVASLVSTSPFDLSDASAAPDFAVLSFYKIFGFPDLGALIVRKSAGHIFDKRKFFGGGTVDMVLTQGTQWHAKKQSSIHERLEDGTLPFHNIIALGSAFDTHERLFGSMDNISSHTRFLAKRLYDRMTTLRHYNGESVCHVYKPSHSDYTDPSTQGPILAFNLRSSQGAWIGKSEVEKMASVRNIQIRSGTLCNPGGTAASLNWSGADMLRHFGAGMRCGDDHDIMDGRPTGILRVSLGAMSNLTDIDTFMGFIEEFYVEKSPNVCALVPPLEANLTHRSGFHVESLSVYPIKSCGAFKVPDGKRWEIRREGLVWDREWCLIHQGTGTALNQKRYPRMALIRPFIDLSHGVLRVTCGSIRSPSQKTLEIPLDRENSNLTTTSLCQNSSKPSTVCGDQVIVQAYSSPTVSAFFSDFLGVPCTLARFPPQSSTRLAEPRRGLGSRKSPLRPAMPGAFPQDTPTPEAERNPILLSNESPILLISRSSVNRLNETIKSSPTTTNSTGRKKAVAADVFRANIVVAEDFPQPVSAGRPYIEDHWESLRIGPDNLHFNVLGSCQRCQMVCVDQLTGVRGEEPYSTLAKTRKSGNKIYFGRHLAISSNGDGNSVNSRTVMVGDVVTPSYYGP

Annotated regions:
phrase: SPLRPAMPGAFPQDTPTPEAERNPILLSNESPILLISRSSVNRLNETIKSSPTTTNSTGRKKAVAADVFRANIVVAEDFPQPVSAGRPYIEDHWESLRIGPDNLHFNVLGSCQRCQMVCVDQLTGVRGEEPYSTLAKTRKSGNKIYFGRHLAISSNGDGNSVNSRTVMVGDVVTP
type: DOMAIN
name: MoCF_Sase_C
description: Molybdenum cofactor sulfurase, C-terminal

phrase: TYLDHAGTTLYAKSLIESFSRDLTSNLYGNPHSMSAPSQLSTQRVDDIRLRALRFFSADPEEFDLVFVANATAAIKLVADSFRESTPQGFWYGYHVDSHTSLVGARELAGIGSRCFVTDAEVESWISQLDTEPVQGPRLFAYPAQSNMNGRRFPRGWCGRIRESAKDTYTLLDVASLVSTSPFDLSDASAAPDFAVLSFYKIFGFPDLGALIVRKSAGHIFDKRKFFGGGTVDMVLTQGTQWHAKKQSSIHERLEDGTLPFHNIIALGSAFDTHERLFGSMDNISSHTRFLAKRLYDRMTTLRHYNGESVCHVYKPSHSDYTDPSTQGPILAFNLRSSQGAWIGKSEVEKMASVRNIQIRSGTLCNPGGTAASLNWSGADMLRHFGAGMRCGDDHDIMDGRPTGILRVSLGAMSNLTDID
type: DOMAIN
name: Aminotrans_V_dom
description: Aminotransferase class V domain

phrase: FHVESLSVYPIKSCGAFKVPDGKRWEIRREGLVWDREWCLIHQGTGTALNQKRYPRMALIRPFIDLSHGVLRVTCGSIRSPSQKTLEIPLDRENSNLTTTSLCQNSSKPSTVCGDQVIVQAYSSPTVSAFFSDFLG
type: DOMAIN
name: MOCOS_middle
description: Molybdenum cofactor sulfurase, middle domain

phrase: ILLSNESPILLISRSSVNRLNETIKSSPTTTNSTGRKKAVAADVFRANIVVAEDFPQPVSAGRPYIEDHWESLRIGPDNLHFNVLGSCQRCQMVCVDQLTGVRGEEPYSTLAKTRKSGNKIYFGRHLAISSNGDGNSVNSRTVMVGDVV
type: DOMAIN
name: MoCF_Sase_C
description: Molybdenum cofactor sulfurase, C-terminal
Protein sequence:
MSEKHPGPLVVEGKLSDAERMKLESNYLRGTIAEDLNDGLTGGFKGDNFLLIRFHGMYQQDDRDIRAERAAQKLEPRHAMLLRCRLPGGVITTTQWKAIDKFAAENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSNPYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQKKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPIRPYEFTGRGDRIGWVKGIDDKWHLTLFIENGRILDYPGRPLKTGLLEIAKVHQGEFRITANQNLIVASVPEDQKARIEKLARDHGLMNAVTPQRENSMACVSFPTCPLAMAEAERFLPSFIDKVEGVMSKHGVSDEHIVTRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHIGGNRNGTRIPRMYRENITESEILDSLDELVGRWAKEREAGEGFGDFTVRAGIIRPVLDPARDFWE

Annotated regions:
phrase: DDKWHLTLFIENGRILDYPGRPLKTGLLEIAKVHQGEFRITANQNLIVASVPEDQKARIEKL
type: DOMAIN
name: NiRdtase/SiRdtase_haem-b_fer
description: Nitrite/Sulfite reductase ferredoxin-like domain

phrase: LLRCRLPGGVITTTQWKAIDKFAAENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLH
type: DOMAIN
name: NiRdtase/SiRdtase_haem-b_fer
description: Nitrite/Sulfite reductase ferredoxin-like domain

phrase: ENSMACVSFPTCPLAMAE
type: BINDING_SITE
name: NO2/SO3_Rdtase_FeS/sirohaem_BS
description: Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site

phrase: TGCPNGCGRAMLAEVGLV
type: BINDING_SITE
name: NO2/SO3_Rdtase_FeS/sirohaem_BS
description: Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site

phrase: TGCPNGCGRAMLAEVG
type: BINDING_SITE
name: NO2/SO3_Rdtase_FeS/sirohaem_BS
description: Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site

phrase: WAKKISEHLLPRTRAYAEIWLDQKKVATTDEEPILGQTYLPRKFKTTVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGYLPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGI
type: DOMAIN
name: NO2/SO3_Rdtase_4Fe4S_dom
description: Nitrite/sulphite reductase 4Fe-4S domain
Protein sequence:
MNPSTALARVLVDELARLGLTEAVIAPGSRSTPLALALVADTRIRTHVRIDERSASFLAVGLARASRRPVALVCTSGTAAANFHPAVLEADQSGVSLIVLTADRPPELRGTGANQTVNQIGLYGSAVRFFAEVGVPEREAGMVAYWRSLVCRAWAAAQANKPGPVHLNLAFREPLVPEPGGQPWPEPVTGRPDGKPWITVDLQRNEPEPVELPWVERGVIVCGDGDYDPIPLLALSAQTGWPLLAEPTSNARRAEALSSYRQLLAVPEFVAAHEPELVVSVGRPGLSRQLLAYLRRAPRHVVVGDPVAFADPVRTATDVVGAVTAPPSATPDTAWAASWAAAEAAARAAADRLLDSDETLSELRLARDLAAHLPAGSLLFAGASMPIRDLDAVMRPRCGLRLIGNRGVSGIDGTVSTAVGAALAHQADGGGEAFALLGDLALLHDQNGLLLGPDEPRPNLTIVVVNNDGGGIFSELEQAGHPDFERVFGTPHGVAVEQVAATAGLPYTRVEWATDLPKALIGDGLRLVEVRTDRAASARLRRALQEAVAAAVR

Annotated regions:
phrase: LARVLVDELARLGLTEAVIAPGSRSTPLALALVADTRIRTHVRIDERSASFLAVGLARASRRPVALVCTSGTAAANFHPAVLEADQSGVSLIVLTADRPPELRGTGANQTVNQI
type: DOMAIN
name: Thiamin_PyroP_enz_TPP-bd_dom
description: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain

phrase: KPWITVDLQRNEPEPVELPWVERGVIVCGDGDYDPIPLLALSAQTGWPLLAEPTSNARRAEALSSYRQLLAVPEFVAAHEPELVVSVGRPGLSRQLLAYLRRAPRHVVVGDPVAFADPVRTATDVVGAVTAPPSATPDTAWAASWAAAEAAARAAADRLLDSDETLSELRLARDLAAHLPAGSLL
type: DOMAIN
name: MenD_middle
description: Menaquinone biosynthesis protein MenD, middle domain
Protein sequence:
MPRKGPAPRRPLVADPVYNSPLVTQLVNKILLRGKRQLAETLVYAALEGCREKSGTDPVVTLKRAMDNVKPTLEVRSRRVGGATYQVPVEVRPARATTLGLRWLVTYARARREKTMVERLMNELLDASNGLGAAVKRREDTHKMAESNKAFAHYRW

Annotated regions:
phrase: SPLVTQLVNKILLRGKRQLAETLVYA
type: CONSERVED_SITE
name: Ribosomal_uS7_CS
description: Small ribosomal subunit protein uS7, conserved site

phrase: PRKGPAPRRPLVADPVYNSPLVTQLVNKILLRGKRQLAETLVYAALEGCREKSGTDPVVTLKRAMDNVKPTLEVRSRRVGGATYQVPVEVRPARATTLGLRWLVTYARARREKTMVERLMNELLDASNGLGAAVKRREDTHKMAESN
type: DOMAIN
name: Ribosomal_uS7_dom
description: Small ribosomal subunit protein uS7 domain
Protein sequence:
MCDDDAGALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANSVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF

Annotated regions:
phrase: WISKQEYD
type: CONSERVED_SITE
name: Actin_CS
description: Actin, conserved site

phrase: LLTEAPLNPKAN
type: CONSERVED_SITE
name: Actin/actin-like_CS
description: Actin/actin-like conserved site

phrase: YVGDEAQSKR
type: CONSERVED_SITE
name: Actin_CS
description: Actin, conserved site
Protein sequence:
MKRKAEKQQAAAPAPMSAVAARKARQQQMQAAIAVVKPSQAESVQEPPSKKARRSPEQAAPTPPASGEPQGRTTRSSKRKAESLKVDKLIEKKEKTLSAEYTEQLPVRSSPQEQEDQSSSDEESEEQNPIVGENDAGIAPLRGDVDGYESPADTSGPIQEFPLSKTRLNKSNIIYSDEHTLCVRIKEKMSLVLLGHYDLWVKRGVVSVMGAKLHPSPRLYRVYAPSTHSLPVIKCVSGVDGAAEIEVKSCHSGIYRLRDLSPLYRRIWNGKNTSADKLTLRTSPSSAKRTFSVLYTSADDSFKRHLRPLHLEKQWSSAIKSLSQRGGRLKALICGPKASGKSTFSRYLLNHLLSPAPQTETNYCNTDGVAFLDLDPGQPEFSPMGQVYLAHLRSPVFGPPFSHPSLDSSQEGTIIRAHHIGATSPKEDPDHYVLAAMDLMDRYRALLASYPQCPLIINYPGWIFGLGLEVATWLVRSLGLSDVVYMSEKGPTEVVMPLGQAAQEAMAPLTILPSQPTDFVSRSSAQLRSMQMQSYFHMTRPTEISNPLWLEKPISRTRPFHVHYAGPKQGIKGVMVMGSQIDPDLLQEVLDGSIVAVVAVESPQAILGQNDGPGLTINHPAQPIDADVTMDDSTDTPMEGVPLQDPINPFIDANIVRTPTENLPYLFVGSGSSNPLDPKASRCLGLALVRSIDVSSQRLELVTPIAGSAIRDALEQSHGIVLVRGQLDNPNWAISEDYYAARAEERRYRESLEKLKKNEATTDKEDSIIEPEQQARVSAILRDRIRRASNVPWMTVIEDNSGHQREAAQREKSLWKLRKKAYPGSDSEGDW

Annotated regions:
phrase: GPKASGKSTFSRYLLNHLLSPAPQTETNYCNTDGVAFLDLDPGQPEFSPMGQVYLAHLRSPVFGPPFSHPSLDSSQEGTIIRAHHIGATSPKEDPDHYVLAAMDLMDRYRALLASYPQCPLIINYPGWIFGLGLEVATWLVRSLGLSDVVYMSEKGPTEVVMPLGQAAQEAMAPLTILPSQPTDFVSRSSAQLRSMQMQSYF
type: DOMAIN
name: CLP1_P
description: Polyribonucleotide 5'-hydroxyl-kinase Clp1, P-loop domain
Protein sequence:
MSDPESPLWVATLLRHHKELKQRQGMFQSRHMEFFRFKRFVRALNSDEYRAKSEREPEKYPPVRSEEDARDVFVSLIKAQLVLPCTKLHTAQCREHGLAPSKDYPHLLLSTKATLDADEYYVWTHNPKTLTDYLTVVGVIVGILAFVCYPLWPHSMKRVVYYLSLGLLGLLAVFSALALVRFVIYVLSLAFCSERGGFWIFPNLFEDCGVIASFKPLYGFGETECYGYIKKQKRRKRKLEKKKQ

Annotated regions: