nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MLDINFIESNLVKVKEQLNKRSGDYSLIIDEAVELNVQRKSILKEVENLKANKNNLSKQVGELMRNKQSDEANKIKEEVTLINSKIEKLDDSLKLVQEQLTSKLQNIPNIPNDNMPIGNDDNDNVEVRQWGNELIKKHNTPHWDIADKLKLVDFEAGPKLSGSRFVVYTGLGAKLVRSLSNILLNLHTSKGYTEITVPLLVNPQAMYGTGQLPKFKEDAYITTNDQYLIPTGEVPLTNLHAGEILDLNQLPIHYTTYSQCFRQEAGSAGRDTKGLIRLHQFNKVELVKITNQESSEAELQAMVNDAEAVLQLFNLPYRVVELCTGDVGFSSSKTYDLEVWFPEQNKYREISSCSNCTDFQARNMQTRYRDANGEVKLAHTLNGSGVAIDRLIAAILENYWDGEKLILPTALKPYFDNKEYID

Annotated regions:
phrase: MLDINFIESNLVKVKEQLNKRSGDYSLIIDEAVELNVQRKSILKEVENLKANKNNLSKQVGELMRNKQSDEANKIKEEVTLINSKIEKLDDSLKLVQEQLTSKLQNIPNI
type: DOMAIN
name: Ser-tRNA-synth_1_N
description: Serine-tRNA synthetase, type1, N-terminal

phrase: PHWDIADKLKLVDFEAGPKLSGSRFVVYTGLGAKLVRSLSNILLNLHTSKGYTEITVPLLVNPQAMYGTGQLPKFKEDAYITTNDQYLIPTGEVPLTNLHAGEILDLNQLPIHYTTYSQCFRQEAGSAGRDTKGLIRLHQFNKVELVKITNQESSEAELQAMVNDAEAVLQLFNLPYRVVELCTGDVGFSSSKTYDLEVWFPEQNKYREISSCSNCTDFQARNMQTRYRDANGEVKLAHTLNGSGVAIDRLIAAILENYWDGEKLIL
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: DNVEVRQWGNELIKKHNTPHWDIADKLKLVDFEAGPKLSGSRFVVYTGLGAKLVRSLSNILLNLHTSKGYTEITVPLLVNPQAMYGTGQLPKFKEDAYITTNDQYLIPTGEVPLTNLHAGEILDLNQLPIHYTTYSQCFRQEAGSAGRDTKGLIRLHQFNKVELVKITNQESSEAELQAMVNDAEAVLQLFNLPYRVVELCTGDVGFSSSKTYDLEVWFPEQNKYREISSCSNCTDFQARNMQTRYRDANGEVKLAHTLNGSGVAIDRLIAAILENYWDGEKLILPTALKP
type: DOMAIN
name: SerRS_core
description: Serine-tRNA ligase catalytic core domain

phrase: NDQYLIPTGEVPLTNLHAGEILDLNQLPIHYTTYSQCFRQEAGSAGRDTKGLIRLHQFNKVELVKITNQESSEAELQAMVNDAEAVLQLFNLPYRVVELCTGDVGFSSSKTYDLEVWFPEQNKYREISSCSNCTDFQARNMQTRYRDANGEVKLAHTLNGSGVAIDRLIAAILEN
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
Protein sequence:
MNTPSIYGLTLDQLEAWLLEQGQKKFRAQQIWDWLYIKRVLDFSEMTNLSKDLVALLSDTFLLQPLNQVVVQESADGTTKYLFQLEDKLMIETVLMRQEYGLSVCVTTQVGCDIGCTFCASGLKRKQRDLTAGEIVAQIMQIQHYLDQKGNGERVSHIVVMGIGEPFDNYDNVIAFLNIVNHAKGLAIGARHITVSTSGLAPKIREFAENGLQVNLALSLHAPNDEIRSRMMRINRKHPLKEVMAAIDEYLEKTNRRITFEYIMISGVNDRPEQAHELVALLKDKRHLSYVNLIPYNPVAEHIKYERSTKKDILAFYDILKKNNINCVIRKEHGTDIDAACGQLRSKHLEKATK

Annotated regions:
phrase: TTQVGCDIGCTFCASGLKRKQRDLTAGEIVAQIMQIQHYLDQKGNGERVSHIVVMGIGEPFDNYDNVIAFLNIVNHAKGLAIGARHITVSTSGLAPKIREFAENGLQVNLALSLHAPNDEIRSRMMRINRKHPLKEVMAAIDEYLEKTNRRITFEYIMISGVNDRPEQAHE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TPSIYGLTLDQLEAWLLEQGQKKFRAQQIWDWLYIKRVLDFSEMTNLSKDLVALLSDTFLLQPLNQVVVQESADGTTKYLFQLEDKLMIETVLMRQEYGLSVCVTTQVGCDIGCTFCASGLKRKQRDLTAGEIVAQIMQIQHYLDQKGNGERVSHIVVMGIGEPFDNYDNVIAFLNIVNHAKGLAIGARHITVSTSGLAPKIREFAENGLQVNLALSLHAPNDEIRSRMMRINRKHPLKEVMAAIDEYLEKTNRRITFEYIMISGVNDRPEQAHELVALLKDKRHLSYVNLIPYNPVAEHIKYERSTKKDILAFYDILKKNNINCVIRKEHGTDIDAACGQLRSKHLEK
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LSVCVTTQVGCDIGCTFCASGLKRKQRDLTAGEIVAQIMQIQHYLDQKGNGERVSHIVVMGIGEPFDNYDNVIAFLNIVNHAKGLAIGARHITVSTSGLAPKIREFAENGLQVNLALSLHAPNDEIRSRMMRINRKHPLKEVMAAIDEYLEKTNRRITFEYIMISGVNDRPEQAHELVALLKDKRHLSYVNLIPYNPVAEHIKYERSTKKDILAFYD
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: IYGLTLDQLEAWLLEQGQKKFRAQQIWDWLYIKRVLDFSEMTNLSKDLVALLSD
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: QEYGLSVCVTTQVGCDIGCTFCASGLKRKQRDLTAGEIVAQIMQIQHYLDQKGNGERVSHIVVMGIGEPFDNYDNVIAFLNIVNHAKGLAIGARHITVSTSGLAPKIREFAENGLQVNLALSLHAPNDEIRSRMMRINRKHPLKEVMAAIDEYLEKTNRRITFEYIMISGVNDRPEQAHELVALLKDKRHLSYVNLIPYNPVAEHIKYERSTKKDILAFYDILKKNNINCVIRKEHGT
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MRIPLVGKDSIESKDIGFTLIHEHLRVFSEAVRQQWPHLYNEDEEFRNAVNEVKRAMQFGVKTIVDPTVMGLGRDIRFMEKVVKATGINLVAGTGIYIYIDLPFYFLNRSIDEIADLFIHDIKEGIQGTLNKAGFVKIAADEPGITKDVEKVIRAAAIANKETKVPIITHSNAHNNTGLEQQRILTEEGVDPGKILIGHLGDTDNIDYIKKIADKGSFIGLDRYGLDLFLPVDKRNETTLRLIKDGYSDKIMISHDYCCTIDWGTAKPEYKPKLAPRWSITLIFEDTIPFLKRNGVNEEVIATIFKENPKKFFS

Annotated regions:
phrase: GFTLIHEH
type: BINDING_SITE
name: AryldialkylPase_Zn-BS
description: Aryldialkylphosphatase, zinc-binding site
Protein sequence:
MTSVSERFRSLKQAGQCALIPFITAGDPDLETTEQALKILDAAGADFIELGVPYSDPLADGPTIQAAATRALSRGVTLEQVLAIVQRVHGQLTAPIILFTYYNPIFYRGIDAFMAQVAAAGVKGLVIPDLPLEESQMVLDAATSHGLDLILLVAPTSPTERIEAIAKASQGFIYLVSVTGVTGARTSVASRVGELLPKLRQVTDKPIGVGFGVSDPAQARQLKEWGADGVIVGSAVVKRLATGTPAEGLAAVKEFCESLKEAIA

Annotated regions:
phrase: IELGVPYSDPLAD
type: ACTIVE_SITE
name: Trp_synthase_alpha_AS
description: Tryptophan synthase, alpha chain, active site
Protein sequence:
MMFNEMGMCGNMDFFSSGSLGEVDFCPVPQAEPDSIVEDDYTDDEIDVDELERRMWRDKMRLKRLKEQDKGKEGVDAAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPENGKPVTGASDNLREWWKDKVRFDRNGPAAITKYQAENNIPGIHEGNNPIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPNGKEDWWPQLGLPKDQGPAPYKKPHDLKKAWKVGVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEESLARELYPESCPPLSLSGGSCSLLMNDCSQYDVEGFEKESHYEVEELKPEKVMNSSNFGMVAKMHDFPVKEEVPAGNSEFMRKRKPNRDLNTIMDRTVFTCENLGCAHSEISRGFLDRNSRDNHQLACPHRDSRLPYGAAPSRFHVNEVKPVVGFPQPRPVNSVAQPIDLTGIVPEDGQKMISELMSMYDRNVQSNQTSMVMENQSVSLLQPTVHNHQEHLQFPGNMVEGSFFEDLNIPNRANNNNSSNNQTFFQGNNNNNNVFKFDTADHNNFEAAHNNNNNSSGNRFQLVFDSTPFDMASFDYRDDMSMPGVVGTMDGMQQKQQDVSIWF

Annotated regions:
phrase: DELERRMWRDKMRLKRLKEQDKGKEGVDAAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPENGKPVTGASDNLREWWKDKVRFDRNGPAAITKYQAENNIPGIHEGNNPIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPNGKEDWWPQLGLPKDQGPAPYKKPHDLKKAWKVGVLTAVIKHMFPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQE
type: DOMAIN
name: EIN3-like_DNA-bd
description: Ethylene insensitive 3-like, DNA-binding domain
Protein sequence:
MKVKGIKKNYQHLWRWGTMLLGILMICSAAENLWVTVYYGVPVWKEANTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVKLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTDLRNATNNSTTNNSTTNNSGMKMETGEIKNCSFNITTSIRDKIQKEYALLYKLDIVPIDNDTNSYRLISCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKTFNGKGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEKEIVIRSDNITDNAKTIIVQLKEAVQITCTRPNNNTRKSIHIGPGRAFYATGEIIGDIRQAHCNLTRGNWENTLQQIAKKLREQFRNKTIVFNQSSGGDPEITMHSFNCGGEFFYCNTTQLFNSTWNSTRINSTWNSTRNDTKVSNETITLPCRIKQLINMWQEVGKVMYAPPIRGTISCSSNITGLLLTRDGGNNKNETENGTEIFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQREKRAVGIGAMFLGFLGAAGSTMGAASVTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKSLDNIWNNMTWMEWEREINNYTREIYTLIEESQNQQEKNEQELLELDQWANLWNWFDITNWLWYIKIFIMIVGGLVGLRIVFAVLSIANRVRQGYSPLSFQTHLPAQRGPDRPEGIEEEGGERDKDRSGRLVDGFLAIIW

Annotated regions:
phrase: MGAASVTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKSLDNIWNNMTWMEWEREINNYTREIYTLIEESQNQQEKNEQELLELDQWANLWNWFDITNWLWYIKIFIMIVGGLVGLRIVFAVLSIANRVRQGYSPLSFQ
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKEANTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVKLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTDLRNATNNSTTNNSTTNNSGMKMETGEIKNCSFNITTSIRDKIQKEYALLYKLDIVPIDNDTNSYRLISCNTSVITQACPKVSFEPIPIHYCAPAGFAILKCNNKTFNGKGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEKEIVIRSDNITDNAKTIIVQLKEAVQITCTRPNNNTRKSIHIGPGRAFYATGEIIGDIRQAHCNLTRGNWENTLQQIAKKLREQFRNKTIVFNQSSGGDPEITMHSFNCGGEFFYCNTTQLFNSTWNSTRINSTWNSTRNDTKVSNETITLPCRIKQLINMWQEVGKVMYAPPIRGTISCSSNITGLLLTRDGGNNKNETENGTEIFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: VQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKSLDNIWNNMTWMEWEREINNYTREIYTLIEESQNQQEKNEQELLELD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MAEKEHYERTKPHVNIGTIGHVDHGKTTLTAAITTVLAEDGLAQAEDYSQIDAAPEEKERGITINTAHVEYETKNRHYAHMDAPGHADYIKNMITGAAQMDGAILVVAATDGPMPQTREHILLARQVGVKYIVVFLNKVDLVDDPELIDLVEMEVRDLLTEYDYPGDDVPVIRGSALKALQGDPEQQDVIRKLMETVDEYIPTPERDTDKPFLMPVEDVFTITGRGTVASGRIDRGTVKVGDEVEIVGLTDKVEKSTVTGLEMFHKTLDLGEAGDNVGVLLRGIDRDQVERGQVLAAPGSIQTHKKFKGQVYILNKDEGGRHTPFFSDYRPQFYFHTTDVTGKIELPEGTEMVMPGDNVEFTVELIKPVAIEKGTKFTIREGGKTVGAGQVTEILD

Annotated regions:
phrase: SIQTHKKFKGQVYILNKDEGGRHTPFFSDYRPQFYFHTTDVTGKIELPEGTEMVMPGDNVEFTVELIKPVAIEKGTKFTIREGGKTVGAGQVTE
type: DOMAIN
name: Transl_elong_EFTu/EF1A_C
description: Translation elongation factor EFTu/EF1A, C-terminal

phrase: NIGTIGHVDHGKT
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: ERGITINT
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: AHMDAPGHAD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: TGAAQMDGAIL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: IVVFLNKVD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: FLMPVEDVFTITGRGTVASGRIDRGTVKVGDEVEIVGLTDKVEKSTVTGLEMFHKTLDLGEAGDNVGVLLRGIDRDQVERGQVLAAP
type: DOMAIN
name: EFTU_2
description: Elongation factor Tu, domain 2

phrase: KPHVNIGTIGHVDHGKTTLTAAITTVLAEDGLAQAEDYSQIDAAPEEKERGITINTAHVEYETKNRHYAHMDAPGHADYIKNMITGAAQMDGAILVVAATDGPMPQTREHILLARQVGVKYIVVFLNKVDLVDDPELIDLVEMEVRDLLTEYDYPGDDVPVIRGSALKALQGDPEQQDVIRKLMETVDEYIPTP
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: VNIGTIGHVDHGKTTLTAAITTVLAEDGLAQAEDYSQIDAAPEEKERGITINTAHVEYETKNRHYAHMDAPGHADYIKNMITGAAQMDGAILVVAATDGPMPQTREHILLARQVGVKYIVVFLNKVDLVDDPELID
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: PHVNIGTIGHVDHGKTTLTAAITTVLAEDGLAQAEDYSQIDAAPEEKERGITINTAHVEYETKNRHYAHMDAPGHADYIKNMITGAAQMDGAILVVAATDGPMPQTREHILLARQVGVKYIVVFLNKVDLVDDPELIDLVEMEVRDLLTEYDYPGDDVPVIRGSALKALQGDPEQQDVIRKLMETVDEYIPT
type: DOMAIN
name: EF-Tu_GTP-bd
description: Elongation factor Tu (EF-Tu), GTP-binding domain

phrase: KPHVNIGTIGHVDHGKTTLTAAITTVLAEDGLAQAEDYSQIDAAPEEKERGITINTAHVEYETKNRHYAHMDAPGHADYIKNMITGAAQMDGAILVVAATDGPMPQTREHILLARQVGVKYIVVFLNKVDLVDDPELIDLVEMEVRDLLTEYDYPGDDVPVIRGSALKALQGDPEQQDVIRKLMETVDEYIP
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: GTVASGRIDRGTVKVGDEVEIVGLTDKVEKSTVTGLEMFHKTLDLGEAGDNVGVLLRGIDRDQVERGQVL
type: DOMAIN
name: EFTu-like_2
description: Translation elongation factor EFTu-like, domain 2

phrase: DAAPEEKERGITINT
type: CONSERVED_SITE
name: G_TR_CS
description: Tr-type G domain, conserved site
Protein sequence:
MTHSTADPNPPQGETTHFGYQKVPVNEKHERVAEVFRSVATRYDIMNDLMSLGTHRLIKRFTLELSGLRQGNRVLDLAGGTGDLSIRFSPIVGKEGHVILADINAAMLKVGRDRIIDRGLASNITVAQSDAECLPFADNCFDCVCIAYGLRNLTRKERALESILRVLKPGGRLLVLEFSKPQNRFISKAYDAFSGLWPIAGKAIVGDKESYRYLVESIRVHPDQEALLAMLDGAGFVDTRFHNVLNGISAIHVGVKP

Annotated regions:
phrase: RVLKPGGRLLVLEF
type: CONSERVED_SITE
name: UbiE/COQ5_MeTrFase_CS
description: UbiE/COQ5 methyltransferase, conserved site
Protein sequence:
MSTLVSLPTAAPAPDYQSIDRPLNFSVAAAAKVRELIQEEGNADLALRVYIQGGGCSGFQYGFEFDENRAEDDLAVATDGVTLLVDPLSLQYLMGAEVDYTESLTGAQFVIRNPNAKTTCGCGSSFSV

Annotated regions:
phrase: LNFSVAAAAKVRELIQEEGNADLALRVYIQGGGCSGFQYGFEFDENRAEDDLAVATDGVTLLVDPLSLQYLMGAEVDYTESLTGAQFVIRNPNAKTTCGC
type: DOMAIN
name: FeS_biogenesis
description: FeS cluster biogenesis

phrase: FVIRNPNAKTTCGCGSS
type: CONSERVED_SITE
name: FeS_cluster_insertion_CS
description: FeS cluster insertion, C-terminal, conserved site
Protein sequence:
MRLWKSMAWGILLWHSQSGALCPAWPPARAAEEIARLQQQLADWNDIYWKQGVSAVDDSVYDQLSARLVQWQRCVGQDVSSTPVSPPLNGTTMHPVAHTGVRKLADRQAVEQWMRGRSELWVQPKVDGVAVTLVYQNGKLARAISRGNGLQGEDWTPKIRLIPSIPQTTQGALANAVLQGEIFLQREGHIQQRMGGMNARSKVAGMLMRQDNASALNSLGIFIWAWPDGPANMPERLSQLAKAGFSLTKKYTLAVKDASEVERARQSWLTSALPFVTDGVVIRMAKEPAAQYWRPGQGDWLAAWKYPPVAQVAQVSAIQFSVGKSGKITVVASLVPVILDDKRVQRVNIGSVKRWEAWDIAPGDQILVSLAGQGIPRLDEVVWRSRERSKPVPPDSHFNSLTCFYASATCQEQFISRLVWLGSRSALGLDGMGEASWRALHQTHRFEHIFSWLALTSAQIANTPGFAKGKSEQIWRQFNLARRQSFTRWIMAMDIPLTQAALQASGDRSWEQLLMRTEQHWRQLPATGERRAGRVIDWRDNPQIKALSRWLSAQHIPGFGS

Annotated regions:
phrase: AQVSAIQFSVGKSGKITVVASLVPVILDDKRVQRVNIGSVKRWEAWDIAPGDQILVSLAGQGIPRLDEVVWRSRER
type: DOMAIN
name: NAD_DNA_ligase_OB
description: NAD-dependent DNA ligase, OB-fold

phrase: SELWVQPKVDGVAVTLVYQNGKLARAISRGNGLQGEDWTPKIRLIPSIPQTTQGALANAVLQGEIFLQREGHIQQRMGGMNARSKVAGMLMRQDNASALNSLGIFIWAWPDGPANMPERLSQLAKAGFSLTKKYTLAVKDASEVERARQSWLTSALPFVTDGVVIRMA
type: DOMAIN
name: DNAligase_adenylation
description: NAD-dependent DNA ligase, adenylation

phrase: KVDGVAVTLVYQNGKLARAISRGNGLQGE
type: ACTIVE_SITE
name: DNA_ligase_AS
description: NAD-dependent DNA ligase, active site

phrase: VGKSGKITVVASLVP
type: CONSERVED_SITE
name: DNA_ligase_CS
description: NAD-dependent DNA ligase, conserved site

phrase: RAAEEIARLQQQLADWNDIYWKQGVSAVDDSVYDQLSARLVQWQRCVGQDVSSTPVSPPLNGTTMHPVAHTGVRKLADRQAVEQWMRGRSELWVQPKVDGVAVTLVYQNGKLARAISRGNGLQGEDWTPKIRLIPSIPQTTQGALANAVLQGEIFLQREGHIQQRMGGMNARSKVAGMLMRQDNASALNSLGIFIWAWPDGPANMPERLSQLAKAGFSLTKKYTLAVKDASEVERARQSWLTSALPFVTDGVVIRMAKEPAAQYWRPGQGDWLAAWKYPPVAQVAQVSAIQFSVGKSGKITVVASLVPVILDDKRVQRVNIGSVKRWEAWDIAPGDQILVSLAGQGIPRLDEVVWRSRERSKPVPPDSHFNSLTCFYASATCQEQFISRLVWLGSRS
type: DOMAIN
name: DNAligase_N
description: NAD-dependent DNA ligase, N-terminal
Protein sequence:
MPKVSSDTLWDIAAAEVRSRESRTDEEEAEEEDAHFPSQRTVFFMGSKAGGKTTILLRFLERDETAKPTLALEYTFGRRARGHNTPKDIAHLWELGGGISLSDLVQIPITADNVSFLSVVLVLDLSKPNALWETMESLLGSARNQVEKVCAALQKTGESRSGKQRVPRVLHKDYPDRELISPFPVPLLIVGSKFDIFQDFDSEKRKVICKTLRFLAHFYGASLIFTSSKSETTMSKSRSFINQLAFGTERPKSISTDPSKPLAIPAGSDSLSQIGPPVATEVDIGTLHAKNPFDLWKKVFEKVFPHESTRERKELKDPVKDPQFSEPLIDSIRAQKDQELDQYKREQAKSWKSLALDP

Annotated regions:
Protein sequence:
MSIEVSNESGYDVSEPELISVARFVIEKMDVHPAAELSMVLLDSAAMADLHMRWMDLPGPTDVMSFPMDELEPGGRPDAPEPGPAMLGDIVLCPEFAEQQAAKAGHSLGHELALLTVHGVLHLLGYDHAEPDEEKEMFALQRQLLEEWVADQVEAYHADRQSEKDRRLLDKSRYFDEP

Annotated regions:
phrase: HGVLHLLGYD
type: CONSERVED_SITE
name: YbeY_CS
description: Endoribonuclease YbeY, conserved site
Protein sequence:
MSKDRDGRRTSRRGTLKKIGGFSLGALSFGAVGRTQAATGSSVTTADIAPPGPNGDPKSVQIDDKYTGAEMYGEGDFRVGLGTDLTMYPPVYRESLGNGSGGWEFDFTVCGSTACRFVDSNGDVKEDDKAKEMWWQEINFNDINQDLYSRNDSDWVGSTPADTQPEFDYTEFALARDGVTLALTALNPAMGSLALGATYFLSDMVNWIASQHEDDSSLKRKWDYDGLSGPLYADSSTYLLARDEMTSNSYESFTIDNIAVAFPEFPVRTKYYVTFTAPDDPSTQSISTLEEEGIYRVPATEVAAARPPGSRRSKSAADEMVYVADPKKFIEVEPVKNPSIPDRIYEEIEQKKKQRSRKQ

Annotated regions:
Protein sequence:
MSENQTADEGRFSSTEIRILGALIEKQATSPESYPLTLNALVLACNQKTSREPVMNLTQGQVGQALRALESQDMTRLQMGSRADRWEQRVDKALELVPAQLILMGLMFLRGPQTLNELLTRSNRLHDFDDTEQIQHQLERLISRGLALHLPRQAGQREDRYTHALGDPAEIEQILAARQQEGGARSSGGNVSEERIEALEARIAALEARLAELEG

Annotated regions:
Protein sequence:
MPATEASPVVCSESAIVKMEDRKRPATHDHNDSAPPLKKQATSVNGGSKPHPDADMPWKDDLERFQKDAIWRQMQEYKREKMSLETKLKEMSKATAYHNDHLRVIDAWFNQLIDEVKTLMGALDEDKDRPSFRSSLLFENMEDFEKHLKARSDDIRAIITRLQSFSINAPPEVTDLQSQLAKKLAEEKGTIAELEKALAEKQQLEESLEAASLRYMVAEKKLDRARSLTVAKLEKQYLLGAQRPGGDSASGNREEQSPVNGLPSSAERNTELEEAHKQLVAVSEKQKEQLQKLESENANLLSQITELNIKRTKPTDDDYAHTDLFKQLRSQYDDVVKRINHLEATNIQLREEAAKLRSERTAYRNQVDEETQNVIAEKEAQLMRAETDLARIRNARDELLADQQMRKAAQEQEKIATTKVQELADAAQARINALESEVDRLRLQLDNTKAAHTEIDDVPLEELRAKYQNLERQYSMLNTELTSMQTACKKYSLLASQKVADFSALEEKVARLTAEKSKADQKYFAAMKSKEARELEVRTLRIQNSKSSDIVSQLKESEATTRSLLANMEKQASETKEALNSIISKHHAAQQQIAENNIVIDGLKAQVNELKALSVSKDSSLASASSACRKAETEIESLKVTLADTKKSLENWKNKSLGNSSSEYEMLRSLALCTVCRRNFKNTAIKTCGHVFCKECVEERLTSRSRKCPNCNRSFGNNDHMHITL

Annotated regions:
phrase: CTVCRRNFKNTAIKTCGHVFCKECVEERLTSRSRKCPNC
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: CGHVFCKEC
type: CONSERVED_SITE
name: Znf_RING_CS
description: Zinc finger, RING-type, conserved site

phrase: CTVCRRNFKNTAIKTCGHVFCKECVEERLTSRSRKCPN
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type
Protein sequence:
MEQNIISTIRDECIRHRSKYLTIAQLTAIAEAKINEFIITGKAKDQDLSSLLDKCIDILSIYKKNSKDIKNIISCKNKGAMISSNSVMIIQLNYVYYKVIHIIVTTNIPHLSEFAKIKLHKSTSDEGNGNNNNNEFQLMNIYNTLLETLLKDENIAKIKSFIKSSIKQTKLNHEQEECNLMRTGSYITSNQLNSLISSSANSASSQMEILLIDIRSRLEFNKSHIDTKNIICLEPISFKMSYSDHDLEKKSLITSPNSEIKMFQSRNLFKFIILYTDANEYNVKQQSVLLDILVNHSFEKPISDDFTKIFILESGFPGWLKSNYGRQVSSSFPSNNNIKDDSVYINGNTSGLSLQHLPKMSPSIRHSMDDSMKEMLVAPTPLNHLQQQQQQQSDNDHVLKRSSSFKKLFSNYTSPNPKNSNSNLYSISSLSISSSPSPLPLHSPDPVKGNSLPINYPETPHLWKNSETDFMTNQREQLNHNSFAHIAPINTKAITSPSRTATPKLQRFPQTISMNLNMNSNGHSSATSTIQPSCLSLSNNDSLDHTDVTPTSSHNYDLDFAVGLENLGNSCYMNCIIQCILGTHELTQIFLDDSYAKHININSKLGSKGILAKYFARLVHMMYKEQVDGSKKISISPIKFKLACGSVNSLFKTASQQDCQEFCQFLLDGLHEDLNQCGSNPPLKELSQEAEARREKLSLRIASSIEWERFLTTDFSVIVDLFQGQYASRLKCKVCSHTSTTYQPFTVLSIPIPKKNSRNNITIEDCFREFTKCENLEVDEQWLCPHCEKRQPSTKQLTITRLPRNLIVHLKRFDNLLNKNNDFVIYPFLLDLTPFWANDFDGVFPPGVNDDELPIRGQIPPFKYELYGVACHFGTLYGGHYTAYVKKGLKKGWLYFDDTKYKPVKNKADAINSNAYVLFYHRVYGV

Annotated regions:
phrase: GLENLGNSCYMNCII
type: CONSERVED_SITE
name: USP_CS
description: Ubiquitin specific protease, conserved site

phrase: SQMEILLIDIRSRLEFNKSHIDTKNIICLEPISFKMSYSDHDLEKKSLITSPNSEIKMFQSRNLFKFIILYTDANEYNVKQQSVLLDILVNHSFEKPISDDFTKIFILESGFPGWLKSNYGRQ
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain

phrase: YELYGVACHFGTLYGGH
type: CONSERVED_SITE
name: USP_CS
description: Ubiquitin specific protease, conserved site

phrase: VGLENLGNSCYMNCIIQCILGTHELTQIFLDDSYAKHININSKLGSKGILAKYFARLVHMMYKEQVDGSKKISISPIKFKLACGSVNSLFKTASQQDCQEFCQFLLDGLHEDLNQCGSNPPLKELSQEAEARREKLSLRIASSIEWERFLTTDFSVIVDLFQGQYASRLKCKVCSHTSTTYQPFTVLSIPIPKKNSRNNITIEDCFREFTKCENLEVDEQWLCPHCEKRQPSTKQLTITRLPRNLIVHLKRFDNLLNKNNDFVIYPFLLDLTPFWANDFDGVFPPGVNDDELPIRGQIPPFKYELYGVACHFGTLYGGHYTAYVKKGLKKGWLYFDDTKYKPVKNKADAINSNAYVLFYHR
type: DOMAIN
name: USP_dom
description: Ubiquitin specific protease domain

phrase: EILLIDIRSRLEFNKSHIDTKNIICLEPISFKMSYSDHDLEKKSLITSPNSEIKMFQSRNLFKFIILYTDANEYNVKQQSVLLDILVNHSFEKPISDDFTKIFILESGFPGWL
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain

phrase: VGLENLGNSCYMNCIIQCILGTHELTQIFLDDSYAKHININSKLGSKGILAKYFARLVHMMYKEQVDGSKKISISPIKFKLACGSVNSLFKTASQQDCQEFCQFLLDGLHEDLNQCGSNPPLKELSQEAEARREKLSLRIASSIEWERFLTTDFSVIVDLFQGQYASRLKCKVCSHTSTTYQPFTVLSIPIPKKNSRNNITIEDCFREFTKCENLEVDEQWLCPHCEKRQPSTKQLTITRLPRNLIVHLKRFDNLLNKNNDFVIYPFLLDLTPFWANDFDGVFPPGVNDDELPIRGQIPPFKYELYGVACHFGTLYGGHYTAYVKKGLKKGWLYFDDTKYKPVKNKADAINSNAYVLF
type: DOMAIN
name: Peptidase_C19_UCH
description: Peptidase C19, ubiquitin carboxyl-terminal hydrolase

phrase: LISSSANSASSQMEILLIDIRSRLEFNKSHIDTKNIICLEPISFKMSYSDHDLEKKSLITSPNSEIKMFQSRNLFKFIILYTDANEYNVKQQSVLLDILVNHSFEKPISDDFTKIFILESGFPGWLKSNY
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain
Protein sequence:
MNTIHLRCLFRMNPLVWCLRADVAAELRSLRRYYHLSNGMESKSVDTRSIYRELGATLSYNMRLGNGMEXEPWLKAAVRKEFVDDNRVKVNNDGNFVNDLSGRRGIYQAAIKASFSSTFSGHLGVGYSHGAGVESPWNAVAGVNWSF

Annotated regions:
phrase: YHLSNGMESKSVDTRSIYRELGATLSYNMRLGNGMEXEPWLKAAVRKEFVDDNRVKVNNDGNFVNDLSGRRGIYQAAIKASFSSTFSGHLGVGYSHGAGVESPWNAVAGVNWS
type: DOMAIN
name: OM_autotransptr_brl_dom
description: Outer membrane autotransporter barrel domain

phrase: YHLSNGMESKSVDTRSIYRELGATLSYNMRLGNGMEXEPWLKAAVRKEFVDDNRVKVNNDGNFVNDLSGRRGIYQAAIKASFSSTFSGHLG
type: DOMAIN
name: Autotransporte_beta
description: Autotransporter beta-domain
Protein sequence:
MNHFELFGLPLQFQLDGSLLSSQFRDLQRQFHPDKFAIASERDRLLAVQKAAQINDAYQVLKNPISRAEYLLVQHGEDIRGEQQTMQDPMFLMEQMELREELEDIADSSDPEDALFAFEGKVSKMYKQQLSAIQQELESEAWLEAADRVRKLKFIAKLKNEIELVEDRLIG

Annotated regions:
phrase: MNHFELFGLPLQFQLDGSLLSSQFRDLQRQFHPDKFAIASERDRLLAVQKAAQINDAYQVLKNPI
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: DGSLLSSQFRDLQRQFHPDKFAIASERDRLLAVQKAAQINDAYQVLKNPISRAE
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: NHFELFGLPLQFQLDGSLLSSQFRDLQRQFHPDKFAIASERDRLLAVQKAAQINDAYQVLKNPISRAEYLLV
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: QDPMFLMEQMELREELEDIADSSDPEDALFAFEGKVSKMYKQQLSAIQQELESEAWLEAADRVRKLKFIAKLKNEI
type: DOMAIN
name: HscB_oligo_C
description: Co-chaperone HscB, C-terminal oligomerisation domain

phrase: NHFELFGLPLQFQLDGSLLSSQFRDLQRQFHPDKFAIASERDRLLAVQKAAQINDAYQVLK
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain
Protein sequence:
MKFIVKLYPEIMMKSKSVRLRFTKMLETNIRNVLKKVDEDAKVQRLFDRIIVKVPEGKPELVDTFAQRLACIPGIAHVVQVSEYPFDTVDSIYQLALPRYRDEIAGKTFCVRVKRSGKHDFNSIDVERYVGGGLNQHTDALGVKLNNPDVTVNLEIDNNKLYMVERRIEGLGGFPMATQEDVLSLISGGFDSGVSSFQFIKKGARTHYCFFNLGGAQHEIGVKQVAFHLWKTYGESHKVRFISVPFEPVVEQILERIDNGQMGVVLKRMMMRAAAKIAEKYGIQALVTGESLGQVSSQTLTNLNVIDRCTDLLIMRPLIAMDKQDIINQSRVIGTEDFAKTMPEYCGVISQKPTVKAVLSKIEAEEKKFDEDLIERIVASAKVIDIRDIESEMNQQITETETVSDIASGEVVIDVRAPEEEERKPLEIDGVEVKVIPFFKLATQFGDLDKSKTYLLYCERGVMSKLQALYLIEQGHQNVKVYRP

Annotated regions:
phrase: DTFAQRLACIPGIAHVVQVSEYPFDTVDSIYQLALPRYRDEIAGKTFCVRVKRSGKHDFNSIDVERYVGGGLNQHTDALGVKLNNPDVTVNLEIDNNKLYMVER
type: DOMAIN
name: THUMP_dom
description: THUMP domain

phrase: TVDSIYQLALPRYRDEIAGKTFCVRVKRSGKHDFNSIDVERYVGGGLNQHTDALGVKLNNPDVTVNLEIDNNKLY
type: DOMAIN
name: THUMP_dom
description: THUMP domain

phrase: KFIVKLYPEIMMKSKSVRLRFTKMLETNIRNVLKKVDEDAKVQRLFDRIIVKVPEGKPELVDTFAQRLACIPGIAHVVQVSEYPFDTVDSIYQLALPRYRDEIAGKTFCVRVKRSGKHDFNSIDVERYVGGGLNQHTDALGVKLNNPDVTVNLEIDNNKLYMVERRIEGL
type: DOMAIN
name: THUMP_ThiI
description: ThiI, THUMP domain

phrase: IVKLYPEIMMKSKSVRLRFTKMLETNIRNVLKKVDEDAKVQRLFDRIIVKVPEGKPELVDTFAQRLACIPGIAHVVQVSEYPFDTVDSIYQLALPRYRDEIAGKTFCVRVKRSGKHDFNSIDVERYVGGGLNQHTDALGVKLNNPDVTVNLEIDNNKLYMVERRIEGLGGFPMATQEDVLSLISGGFDSGVSSFQFIKKGARTHYCFFNLGGAQHEIGVKQVAFHLWKTYGESHKVRFISVPFEPVVEQILERIDNGQMGVVLKRMMMRAAAKIAEKYGIQALVTGESLGQVSSQTLTNLNVIDRCTDLLIMRPLIAMDKQDIINQSRVIGTEDFAKTMPEYCGVISQKPTVKAVLSKIEAEEKKFDEDLI
type: DOMAIN
name: ThiI_N
description: ThiI, N-terminal

phrase: HVVQVSEYPFDTVDSIYQLALPRYRDEIAGKTFCVRVKRSGKHDFNSIDVERYVGGGLNQHTDALGVKLNNPDVTVNLEIDNNKLYMVER
type: DOMAIN
name: THUMP_dom
description: THUMP domain

phrase: TQEDVLSLISGGFDSGVSSFQFIKKGARTHYCFFNLGGAQHEIGVKQVAFHLWKTYGESHKVRFISVPFEPVVEQILERIDNGQMGVVLKRMMMRAAAKIAEKYGIQALVTGESLGQVSSQTLTNLNVIDRCTDLLIMRPLIAMDKQDIINQSRVIGTEDFAKTMPEYCGVISQKPTVKAVLSKIEAEEKK
type: DOMAIN
name: ThiI_AANH
description: Thil, AANH domain

phrase: TQEDVLSLISGGFDSGVSSFQFIKKGARTHYCFFNLGGAQHEIGVKQVAFHLWKTYGESHKVRFISVPFEPVVEQILERIDNGQMGVVLKRMMMRAAAKIAEKYGIQALVTGESLGQVSSQTLTNLNVIDRCTDLLIMRPLIAMDKQDIINQSRVIGTEDFAKTMPEYCGVISQKPTVK
type: DOMAIN
name: ThiI_AANH
description: Thil, AANH domain

phrase: IDIRDIESEMNQQITETETVSDIASGEVVIDVRAPEEEERKPLEIDGVEVKVIPFFKLATQFGDLDKSKTYLLYCERGVMSKLQALYLIEQGHQNVKVYR
type: DOMAIN
name: THII_Thiazole_biosynth_dom
description: ThiI, thiazole biosynthesis domain

phrase: IASGEVVIDVRAPEEEERKPLEIDGVEVKVIPFFKLATQFGDLDKSKTYLLYCERGVMSKLQALYLIEQGHQNVKV
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain

phrase: YPEIMMKSKSVRLRFTKMLETNIRNVLKKVDEDAKVQRLFDRIIVKVPEGKPELVDTFAQRLACIPGIA
type: DOMAIN
name: ThiI_fer
description: ThiI, ferredoxin-like domain
Protein sequence:
MMVDTGVDHRAVSSHDGPDAGRRVFGAADPRFACVVRAFASMFPGRRFGGGALAVYLDGQPVVDVWKGWADRAGWVPWSADSAPMVFSATKGMTATVIHRLADRGLIDYEAPVAEYWPAFGANGKATLTVRDVMRHQAGLSGLRGATQQDLLDHVVMEERLAAAVPGRLLGKSAYHALTFGWLMSGLARAVTGKDMRLLFREELAEPLDTDGLHLGRPPADAPTRVAEIIMPQDIAANAVLTCAMRRLAHRFSGGFRSMYFPGAIAAVQGEAPLLDAEIPAANGVATARALARMYGAIANGGEIDGIRFLSRELVTGLTRNRRQVLPDRNLLVPLNFHLGYHGMPIGNVMPGFGHVGLGGSIGWTDPETGVAFALVHNRLLSPLVMTDHAGFVGIYHLIRQAAAQARKRGYQPVTPFGAPYSEPGAAAG

Annotated regions:
phrase: RRFGGGALAVYLDGQPVVDVWKGWADRAGWVPWSADSAPMVFSATKGMTATVIHRLADRGLIDYEAPVAEYWPAFGANGKATLTVRDVMRHQAGLSGLRGATQQDLLDHVVMEERLAAAVPGRLLGKSAYHALTFGWLMSGLARAVTGKDMRLLFREELAEPLDTDGLHLGRPPADAPTRVAEIIMPQDIAANAVLTCAMRRLAHRFSGGFRSMYFPGAIAAVQGEAPLLDAEIPAANGVATARALARMYGAIANGGEIDGIRFLSRELVTGLTRNRRQVLPDRNLLVPLNFHLGYHGMPIGNVMPGFGHVGLGGSIGWTDPETGVAFALVHNRLL
type: DOMAIN
name: Beta-lactam-related
description: Beta-lactamase-related
Protein sequence:
MGGKWSKRSIGGWPAVRERIRRAGPAERVETAAEGVGTASQDLDKYGALTSSNTAHNNADWAWLEAQEEAEEVGFPVRPQVPLRPMTYKGAFDLGFFLKEKGGLEGLIYSKKRQEILDLWVYHTQGYFPDWQNYTPGPGVRYPLCFGWCFKLVPVDPREVEEANKGEDNCLLHPMSQHGMEDEEGEVLKWQFDSSLARRHMARELHPEYFKDC

Annotated regions: