nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSLWKKTLYKSVCLALALLVAVTVFQRSVTPGQFLQDPLPPTLGPPKTGSLVNPNSFWKSSKDVVAPTPTVPRGPQVWDVVTTNCSINVNLTHQPWFQNLEPHFRQFLAYQHCRYFPMLLNHPEKCAGDVYLLVVVKSVITQHDRREVIRQTWGHEWESAGPDRGAVRTLFLLGTASKQEERTHYQQLLAYEDRLYGDILQWDFLDSFFNLTLKEIHFLKWLDIYCPNVPFIFKGDDDVFVNPTNLLEFLSDRQPQENLFVGDVLKHARPIRKKDNKYYIPAVMYSKATYPPYAGGGGFLMSGSLARQLHHACDTLELFPIDDVFLGMCLEVLGVKPTGHEGFKTFGISRVRGSRMNKEPCFYRSMLVVHKLLPAELLAMWDLVHSNLTCSLKFQVL

Annotated regions:
Protein sequence:
MSILKLSQNLIEDFLIKNNCKTFHLKQINEWIYQKYPSSFDEMSNLSLELRNKLKENFQLYSLTLKKEVSSKDKQTKKYLFQLEDGFFIETVLILSEKRKTLCLSTQVGCPIKCTFCASGKNGFYRNLKSYEILEQIIHVSKKISDKPTHIVFMGMGEPLLNLDAVVESIEKISDKTKFNISQRRITVSTVGILENIRKLKERNLKVNLALSVHAPNDELRNKIIPFSKKYKLKDLINELRLYFETTKRDISFEYILIDDLNDSIEHAKELAALLKNIQCSINLIPYNPIDGFSYKKPNSAKVNKFKEYLACCNMVVSQRYTKGDDIAAACGQLSLVEKC

Annotated regions:
phrase: KTLCLSTQVGCPIKCTFCASGKNGFYRNLKSYEILEQIIHVSKKISDKPTHIVFMGMGEPLLNLDAVVESIEKISDKTKFNISQRRITVSTVGILENIRKLKERNLKVNLALSVHAPNDELRNKIIPFSKKYKLKDLINELRLYFETTKRDISFEYILIDDLNDSIEHAKELAALLKNIQCSINLIPYNPIDGFSYKKPNSAKVNKFKEYL
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: ILKLSQNLIEDFLIKNNCKTFHLKQINEWIYQKYPSSFDEMSNLSLELRNKLKEN
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: STQVGCPIKCTFCASGKNGFYRNLKSYEILEQIIHVSKKISDKPTHIVFMGMGEPLLNLDAVVESIEKISDKTKFNISQRRITVSTVGILENIRKLKERNLKVNLALSVHAPNDELRNKIIPFSKKYKLKDLINELRLYFETTKRDISFEYILIDDLNDSIEHAK
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SEKRKTLCLSTQVGCPIKCTFCASGKNGFYRNLKSYEILEQIIHVSKKISDKPTHIVFMGMGEPLLNLDAVVESIEKISDKTKFNISQRRITVSTVGILENIRKLKERNLKVNLALSVHAPNDELRNKIIPFSKKYKLKDLINELRLYFETTKRDISFEYILIDDLNDSIEHAKELAALLKNIQCSINLIPYNPIDGFSYKKPNSAKVNKFKEYLACCNMVVSQRYTKG
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SILKLSQNLIEDFLIKNNCKTFHLKQINEWIYQKYPSSFDEMSNLSLELRNKLKENFQLYSLTLKKEVSSKDKQTKKYLFQLEDGFFIETVLILSEKRKTLCLSTQVGCPIKCTFCASGKNGFYRNLKSYEILEQIIHVSKKISDKPTHIVFMGMGEPLLNLDAVVESIEKISDKTKFNISQRRITVSTVGILENIRKLKERNLKVNLALSVHAPNDELRNKIIPFSKKYKLKDLINELRLYFETTKRDISFEYILIDDLNDSIEHAKELAALLKNIQCSINLIPYNPIDGFSYKKPNSAKVNKFKEYLACCNMVVSQRYTKGDDIAAACGQLS
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MTNIRKTHPLLKIINSSFVDLPAPSSLSSWWNFGSLLAACLAVQILTGLFLAMHYTSDTATAFDSVAHICRDVNYGWTLRYLHANGASMFFICLYLHVGRGLYYGSYTYSETWNVGILLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATLTRFFAFHFLLPFIVSALVMVHLLFLHETGSNNPTGIPSDPDMIPFHPYYTIKDILGFLIMLTALSALVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILILAIVPMLHISKQRSMMFRPLSQCLFWLLVAVLLTLTWIGGQPVEYPYVIIGQVASVLYFLIFLVFMPLVSAMENYLLKW

Annotated regions:
phrase: VDLPAPSSLSSWWNFGSLLAACLAVQILTGLFLAMHYTSDTATAFDSVAHICRDVNYGWTLRYLHANGASMFFICLYLHVGRGLYYGSYTYSETWNVGILLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATLTRFFAFHFLLPFIVSALVMVHLLFLHET
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: PLLKIINSSFVDLPAPSSLSSWWNFGSLLAACLAVQILTGLFLAMHYTSDTATAFDSVAHICRDVNYGWTLRYLHANGASMFFICLYLHVGRGLYYGSYTYSETWNVGILLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATLTRFFAFHFLLPFIVSALVMVHLLFLHETGS
type: DOMAIN
name: Cytochrome_b_N_euk/bac
description: Cytochrome b/b6, N-terminal domain, eukaryotic/bacterial

phrase: GIPSDPDMIPFHPYYTIKDILGFLIMLTALSALVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILILAIVPMLHISKQRSMMFRPLSQCLFWLLVAVLLTLTWIGGQPVEYPYVIIGQVASVLYFLIFLVFMPLVSAMENYLLK
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: MTNIRKTHPLLKIINSSFVDLPAPSSLSSWWNFGSLLAACLAVQILTGLFLAMHYTSDTATAFDSVAHICRDVNYGWTLRYLHANGASMFFICLYLHVGRGLYYGSYTYSETWNVGILLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTDLVQWIWGGFSVDKATLTRFFAFHFLLPFIVSALVMVHLLFLHETGSNNP
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: NPTGIPSDPDMIPFHPYYTIKDILGFLIMLTALSALVLFSPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILILAIVPMLHISKQRSMMFRPLSQCLFWLLVAVLLTLTWIGGQPVEYPYVIIGQV
type: DOMAIN
name: Cytochrome_b_C_euk/bac
description: Cytochrome b/b6, C-terminal domain, eukaryotic/bacterial

phrase: PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVMSILILAIVPMLHISKQRSMMFRPLSQCLFWLLVAVLLTLTWIGGQPVEYPYVIIGQVASVLY
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal
Protein sequence:
MARMNRPAPVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRFKDSNGHRNNCCIQ

Annotated regions:
phrase: DDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGGMKYEDAVQFIRQKRRGAFNSKQLL
type: DOMAIN
name: Tyr_Pase_dom
description: Tyrosine-specific protein phosphatases domain

phrase: APVEVTYKNMRFLITHNPTNATLNKFIEELKKYGVTTIVRVCEATYDTTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRPKMRLRF
type: DOMAIN
name: TYR_PHOSPHATASE_DUAL_dom
description: Dual specificity protein phosphatase domain

phrase: KEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIEGGMKYEDAVQFIRQKRRGAFNSKQLLYLEKYRP
type: DOMAIN
name: Tyr_Pase_cat
description: Protein-tyrosine phosphatase, catalytic
Protein sequence:
MGKQEVRTRSGERVAIVAGLRTPFARQSTEFGQVPAVDLGKMVVQEMMARTAIDPKLIEQVVFGQVVQMPEAPNIAREIVLGTGMSINTDAYSVTRACATSFQAAVNVAESIMAGSIDIGIAGGADSSSVLPIGVSKKLAASLLALSKTKTVGQKLKLLSNLSFKDLMPVPPAVAEYSTGLSMGQTAEQMAKSYAISRAEQDALAHRSHTLAAQAWAEGKIRDEVMTAFPEPYKKWLDMDNNIRMDSKLESYAKLRPAFDRQYGSVTAANSTPLTDGAAAIMLMREGKAKELGLEIMGYIRSYAFAAIGVEKDMLMGPSYATPIALDRAGITLNDLTLIDMHEAFAAQTLANLKMFASDKFAQEQLGRAQAIGEVDMSKFNVLGGSLAYGHPFAATGARMITQTLRELKRRGGGLALNTACAAGGLGAAMILEVE

Annotated regions:
phrase: VAIVAGLRTPFARQSTEFGQVPAVDLGKMVVQEMMARTAIDPKLIEQVVFGQVVQMPEAPNIAREIVLGTGMSINTDAYSVTRACATSFQAAVNVAESIMAGSIDIGIAGGADSSSVLPIGVSKKLAASLLALSKTKTVGQKLKLLSNLSFKDLMPVPPAVAEYSTGLSMGQTAEQMAKSYAISRAEQDALAHRSHTLAAQAWAEGKIRDEVMTAFPEPYKKWLDMDNNIRMDSKLESYAKLRPAFDRQYGSVTAANSTPLTDGAAAIMLMR
type: DOMAIN
name: Thiolase_N
description: Thiolase, N-terminal

phrase: EIMGYIRSYAFAAIGVEKDMLMGPSYATPIALDRAGITLNDLTLIDMHEAFAAQTLANLKMFASDKFAQEQLGRAQAIGEVDMSKFNVLGGSLAYGHPFAATGARMITQTLRELKRRGGGLALNTACAAGGLGAAMIL
type: DOMAIN
name: Thiolase_C
description: Thiolase, C-terminal

phrase: NVLGGSLAYGHPFAAT
type: CONSERVED_SITE
name: Thiolase_CS
description: Thiolase, conserved site
Protein sequence:
MLAEQFTDKNKHAEQELSPGSSAVTGARNWRASLTLNLTKESNRTILKQAAHQGPLRVQRPFYPEGAQRPHIYILHPPGGLVCGDEIEIDAKLEHGAEALLTTPSAGKIYRTDAAGHRQCQTVRLNCADAQSLEWLPQENIIYDGAEGAQTLLLETSAASRFIAWEITALGRPAADAPFASGAFTQTTRILRDSAPCFFERVALRGEGPGFQEPWGLQGQQVYGSLLAGYVQDSPQKRLQQCREALQANTAIAALGDSKDLRWTLTRKDDLIILRALCQQSEPIKRLFMAAWSLLRPALIGVESHPPRIWAT

Annotated regions:
Protein sequence:
MSSALAVRRVGILGGTFDPVHIGHLRSALEVAEFMRLDELRLLPNARPPHRDTPQVSAQDRLAMVRDAVAGVGGLSVDDRELARDKPSYTIDTLESIRAELNTHDQLFLVLGWDAFCGLPSWHRWEELLQHCHILVLQRPDADVEPPDELRNLLAARSESDPTAMSGPAGHISFVWQTPLAVSATQIRQLLASGKSARFLVPDAVLAYIEAHDLYRASN

Annotated regions:
phrase: VGILGGTFDPVHIGHLRSALEVAEFMRLDELRLLPNARPPHRDTPQVSAQDRLAMVRDAVA
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: ILGGTFDPVHIGHLRSALEVAEFMRLDELRLLPNARPPHRDTPQVSAQDRLAMVRDAVAGVGGLSVDDRELARDKPSYTIDTLESIRAELNTHDQLFLVLGWDAFCGLPSWHRWEELLQHCHILVLQRPDADVEPPDELRNLLAARSESDPTAMSGPAGHISFVWQTPLAVSATQIR
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain
Protein sequence:
MSLDVRVIAPNKVIWAKNAEEVILPSQSGMLGILTSHAPLYTALNTGVMKIRNETGWTSIVVMGGFVEVEKNEVLVLVNAGEYVDEIDLSAAKKDVEKALETFNSAEAPKEKEEAAEFLKYAQARLKAVVDK

Annotated regions:
phrase: LDVRVIAPNKVIWAKNAEEVILPSQSGMLGILTSHAPLYTALNTGVMKIRNETGWTSIVVMGGFVEVEKNEVLVLV
type: DOMAIN
name: ATP_synth_F1_dsu/esu_N
description: ATP synthase, F1 complex, delta/epsilon subunit, N-terminal
Protein sequence:
MLFRSQTHVFPGVYMMVAMLVVALSGYQVQSYSAKDILADVLMTDLLNRMDKDMQVGYYDVGNEAAAGSKDNVDLVSRSEYARLCDGGSDCILQSGSASGAASHPSLRDDEFLQHSSLWGHQFISGGMGEGPNRYPTIVKNDAGLPAYCNPPNPCPEGYDMETQGGSCIVDFENTAIFSREFQAAQDCTCDNEHMFDCSEQDSADVGGDKGDLNSAVEQYIMQMGQENSLNNVNSLAKKAGYPVMPDPRLDDAVINPFLQGDRLPIAAKKGNLLFH

Annotated regions:
Protein sequence:
MITISDAAQAHFVKLLADQPEGTHIRVFVISPGTPSAECGVSYCPPDAVEADDIELEFNGFHAMVDEKSAPFLEDASIDFVTDQLGSQLTLKAPNAKMRKVDADAPLKERIEYVIQSEINPQLASHGGNIMLVDIDEAGIAILQFGGGCNGCSMVDVTLKDGIEKQLLDMFPGELTGVRDVTEHQHGEHSYQ

Annotated regions:
phrase: ITISDAAQAHFVKLLADQPEGTHIRVFVISPGTPSAECGVSYCPPDAVEADDIELEFNGFHAMVDEKSAPFLEDASIDFVTDQLGSQLTLKAPNAKM
type: DOMAIN
name: FeS_biogenesis
description: FeS cluster biogenesis

phrase: IEYVIQSEINPQLASHGGNIMLVDIDEAGIAILQFGGGCNGCSMVDVTLKDGIEKQLLDMFPG
type: DOMAIN
name: NIF_FeS_clus_asmbl_NifU_C
description: NIF system FeS cluster assembly, NifU, C-terminal
Protein sequence:
MKSLLACLALMIAGIATALFIGFHDHTGNKKIVYDDDQEGLQDQIVFKFSHVVAENTPKGLAANKFADLVNEKSGGKIKIEVFPNGSLYSDIEEIEALQNGDVQFIAPSTSKLGMLSPEWGVLDLPYAFTDYNAVKKGLNGSIGTQLFDSLKKNQLKGLAYWTNGFKQITTNQGPVKTPDDLKGQDLRIMQSDVIEDQFKLLGATPHQESFNSTFQLLENNVVDGEENTISNIYSKKFYNVQDYLTISSHGYLGYAVMTDEHFWKAQTPETRRILTEAMKETTEWNETYAEQMNKEQLEEIKKNSAIHIYELSDKEKQEWMKRLDPVYRQYEPIFGRELIRELLELRKDS

Annotated regions:
Protein sequence:
MNQVLTETRPIRLKGRSFLAMVLSPELPLDGWLERLDDLARRSSGFFLGRPVVLDMENLAIERAQLVYLLQALNDRGVWIMGVEGARPSLLGPGMPPAMRGGQPAADFEAPAGEPQANPGAPEPQISQAVRAPGHAVHAMPSMVITEPVRSGQSVYFPEGDVTIVGSVASGAEVVAGGSIHIYGTLRGRALAGTAGNTSARIFCRKLEAELVAIDGLYKTAEDLEPRFRGQAVQLWLDGDYMMIDTLS

Annotated regions:
phrase: VITEPVRSGQSVYFPEGDVTIVGSVASGAEVVAGGSIHIYGTLRGRALAGTAGNTSARIFCRKLEAELVAIDGLYKTAEDLEPRFRGQAVQLWLDGDYMM
type: DOMAIN
name: Septum_form_inhib_MinC_C
description: Septum formation inhibitor MinC, C-terminal
Protein sequence:
MDESFDAFEIKPNSSIIEHFNNHPTCIDKEFNFILQKTELRALETDKFRSALEAKNKLKNRYSNVLPFEETRVKINIDDDDDDEDDNEDDIIVSNNNNNNNNNEKRIKRNSIGSSGQSDVMSNSSDEEDHGGSGDEGTTLSDYINASFINNGTYICTQGPLLNTIVDFWKMIWEQNSNIIVMLTREEENFKTKCDKYWPDKDEERYGNFIVKFDNNITIPDILIRREFTLENLKDNKTRKIYHFQYTTWPDHGTPVSTTGFLKFVSFVDHEKRSGPIVVHCSAGIGRSGTFVAIHSIVAKFAKHYDEKKQAPSINLPKLVVEMRNERPGMVQTRDQYRFCYLAISEAMNTVLKKEQKKRKGLSYSYSSIPLTGPEHD

Annotated regions:
phrase: LKFVSFVDHEKRSGPIVVHCSAGIGRSGTFVAIHSIVAKFAKHYDEKKQAPSINLPKLVVEMRNERPGMVQTRDQY
type: DOMAIN
name: Tyr_Pase_dom
description: Tyrosine-specific protein phosphatases domain

phrase: IDKEFNFILQKTELRALETDKFRSALEAKNKLKNRYSNVLPFEETRVKINIDDDDDDEDDNEDDIIVSNNNNNNNNNEKRIKRNSIGSSGQSDVMSNSSDEEDHGGSGDEGTTLSDYINASFINNGTYICTQGPLLNTIVDFWKMIWEQNSNIIVMLTREEENFKTKCDKYWPDKDEERYGNFIVKFDNNITIPDILIRREFTLENLKDNKTRKIYHFQYTTWPDHGTPVSTTGFLKFVSFVDHEKRSGPIVVHCSAGIGRSGTFVAIHSIVAKFAKHYDEKKQAPSINLPKLVVEMRNERPGMVQTRDQYRFCYLAISE
type: DOMAIN
name: PTP_cat
description: Tyrosine-specific protein phosphatase, PTPase domain

phrase: CIDKEFNFILQKTELRALETDKFRSALEAKNKLKNRYSNVLPFEETRVKINIDDDDDDEDDNEDDIIVSNNNNNNNNNEKRIKRNSIGSSGQSDVMSNSSDEEDHGGSGDEGTTLSDYINASFINNGTYICTQGPLLNTIVDFWKMIWEQNSNIIVMLTREEENFKTKCDKYWPDKDEERYGNFIVKFDNNITIPDILIRREFTLENLKDNKTRKIYHFQYTTWPDHGTPVSTTGFLKFVSFVDHEKRSGPIVVHCSAGIGRSGTFVAIHSIVAKFAKHYDEKKQAPSINLPKLVVEMRNERPGMVQTRDQYRFCYLAISEAM
type: DOMAIN
name: PTP_cat
description: Tyrosine-specific protein phosphatase, PTPase domain

phrase: DYINASF
type: DOMAIN
name: PTP_cat
description: Tyrosine-specific protein phosphatase, PTPase domain

phrase: YICTQGPLLNTIVDFWKMIW
type: DOMAIN
name: PTP_cat
description: Tyrosine-specific protein phosphatase, PTPase domain

phrase: RKIYHFQYTTWPDHGTP
type: DOMAIN
name: PTP_cat
description: Tyrosine-specific protein phosphatase, PTPase domain

phrase: PIVVHCSAGIGRSGTFVA
type: DOMAIN
name: PTP_cat
description: Tyrosine-specific protein phosphatase, PTPase domain

phrase: INLPKLVVEMRNERP
type: DOMAIN
name: PTP_cat
description: Tyrosine-specific protein phosphatase, PTPase domain

phrase: MVQTRDQYRF
type: DOMAIN
name: PTP_cat
description: Tyrosine-specific protein phosphatase, PTPase domain

phrase: KIYHFQYTTWPDHGTPVSTTGFLKFVSFVDHEKRSGPIVVHCSAGIGRSGTFVAIHSIVAKFAKHYDEKKQAPSINLPKLVVEMRNERPGMVQTRDQYRFCYLAIS
type: DOMAIN
name: Tyr_Pase_cat
description: Protein-tyrosine phosphatase, catalytic

phrase: VHCSAGIGRS
type: ACTIVE_SITE
name: Tyr_Pase_AS
description: Protein-tyrosine phosphatase, active site

phrase: LSDYINASFINNGTYICTQGPLLNTIVDFWKMIWEQNSNIIVMLTREEENFKTKCDKYWPDKDEERYGNFIVKFDNNITIPDILIRREFTLENLKDNKTRKIYHFQYTTWPDHGTPVSTTGFLKFVSFVDHEKRSGPIVVHCSAGIGRSGTFVAIHSIVAKFAKHYDEKKQAPSINLPKLVVEMRNERPGMVQTRDQYRFCYLAI
type: DOMAIN
name: PTP_cat
description: Tyrosine-specific protein phosphatase, PTPase domain
Protein sequence:
MMSSPKCKVYVIGVGMTKFEKPGSRDDFDYPQMAKEAVTKALADAKIQHGEIKQACVGYVYGDSTCGQRAVYEVGMTGIPIYNVNNNCSTGSTALFMAKQFVESGQNDCVLALGFEKMEKGSLMSKFNDRTNPMDKHVEAMCDIAGFGAGPVTAQLFGNAGKEHNEKYGSTPEHMAKIAYKNHKHSVNNPYSQFRDEYSLEQIKQSPQVFGPLTKLQCCPTSDGAGAAILASEEFVKRHHLEDQAVEIVGMEMTTDTTTTFKDKSLMKLVGYDMTKNAADKLFSKTQYKPTDVQVVELHDCFSANELITYEALGLCPPGKAGELIDTGNNTYGGKYVINPSGGLISKGHPLGATGLAQCAELCWQLRGQAEKRQVPGARLALQHNIGLGGAVVVALYKLGFPKAEQQQGKQPSSAPASPDDFQVTKYLKVLEGAMQDDTENLIERVRGIYGFKVRNGPGGKEGYWVINAKVGKGKVEYNGKDKPDVTFIINDSDIVDLISGTLNPQKAFFQGKIKITGNMGLAMKLADLQRVASKRIEELRSKL

Annotated regions:
phrase: NPSGGLISKGHPLGAT
type: CONSERVED_SITE
name: Thiolase_CS
description: Thiolase, conserved site

phrase: GYDMTKNAADKLFSKTQYKPTDVQVVELHDCFSANELITYEALGLCPPGKAGELIDTGNNTYGGKYVINPSGGLISKGHPLGATGLAQCAELCWQLRGQAEKRQVPGARLALQHNIG
type: DOMAIN
name: Thiolase_C_2
description: Thiolase, C-terminal domain 2

phrase: VNNNCSTGSTALFMAKQF
type: ACTIVE_SITE
name: Thiolase_acyl_enz_int_AS
description: Thiolase, acyl-enzyme intermediate active site

phrase: VYVIGVGMTKFEKPGSRDDFDYPQMAKEAVTKALADAKIQHGEIKQACVGYVYGDSTCGQRAVYEVGMTGIPIYNVNNNCSTGSTALFMAKQFVESGQNDCVLALGFEKMEKGSLMSKFNDRTNPMDKHVEAMCDIAGFGAGPVTAQLFGNAGKEHNEKYGSTPEHMAKIAYKNHKHSVNNPYSQFRDEYSLEQIKQSPQVFGPLTKLQCCPTSDGAGAAILASE
type: DOMAIN
name: Thiolase_N
description: Thiolase, N-terminal

phrase: DDTENLIERVRGIYGFKVRNGPGGKEGYWVINAKVGKGKVEYNGKDKPDVTFIINDSDIVDLISGTLNPQKAFFQGKIKITGNMGLAMKLADL
type: DOMAIN
name: SCP2_sterol-bd_dom
description: SCP2 sterol-binding domain
Protein sequence:
MTRTNLLQFDAEGFADFFTGLGEKPFRARQVMRWIHRNGEGDFDAMSDVAKSLRAKLSDIACVQAPVPVRDSTSTDGTRKWLIDVGAGNAVETVFIPEERRGTLCISTQAGCALDCAFCSTGKQGFNRNLEVSEIIGQLWLANRALGAVRGGENDGERVISNVVMMGMGEPLANFDATVAALKLMLDDNAYGLSRRRVTVSTSGIVPAMDRLRDACPVALAVSLHAPNDALRDELVPINKKYPLRELLAACVRYLDRAPRDFITFEYVMLDGVNDSDEHARQLVDIARQVPCKYNLIPFNPFPQAPFGRSSKERIRRFSEILIEAGIVTTTRKTRGDDVDAACGQLAGQVLDKTRRTRKTIPLQEVPAR

Annotated regions:
phrase: TNLLQFDAEGFADFFTGLGEKPFRARQVMRWIHRNGEGDFDAMSDVAKSLRAKLSDIAC
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: EERRGTLCISTQAGCALDCAFCSTGKQGFNRNLEVSEIIGQLWLANRALGAVRGGENDGERVISNVVMMGMGEPLANFDATVAALKLMLDDNAYGLSRRRVTVSTSGIVPAMDRLRDACPVALAVSLHAPNDALRDELVPINKKYPLRELLAACVRYLDRAPRDFITFEYVMLDGVNDSDEHARQLVDIARQVPCKYNLIPFNPFPQAPFGRSSKERIRRFSEILIEAGIVTTTRKTRGD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TRTNLLQFDAEGFADFFTGLGEKPFRARQVMRWIHRNGEGDFDAMSDVAKSLRAKLSDIACVQAPVPVRDSTSTDGTRKWLIDVGAGNAVETVFIPEERRGTLCISTQAGCALDCAFCSTGKQGFNRNLEVSEIIGQLWLANRALGAVRGGENDGERVISNVVMMGMGEPLANFDATVAALKLMLDDNAYGLSRRRVTVSTSGIVPAMDRLRDACPVALAVSLHAPNDALRDELVPINKKYPLRELLAACVRYLDRAPRDFITFEYVMLDGVNDSDEHARQLVDIARQVPCKYNLIPFNPFPQAPFGRSSKERIRRFSEILIEAGIVTTTRKTRGDDVDAACGQLAGQVLDKTRRTR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: ISTQAGCALDCAFCSTGKQGFNRNLEVSEIIGQLWLANRALGAVRGGENDGERVISNVVMMGMGEPLANFDATVAALKLMLDDNAYGLSRRRVTVSTSGIVPAMDRLRDACPVALAVSLHAPNDALRDELVPINKKYPLRELLAACVRYLDRAPRDFITFEYVMLDGVNDSDEHAR
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MSNLKAIRDRIQSVKNTKKITEAMRLVASAKVRRAQEQVLATRPFADRLAGVLYGLQGRLQFEDVECPLLQQREVKKVGLVVLAGNRGLCGAYNSNIIKRAEARAAELKAEGLEYSYLLVGRKAIQHFTRRDAPISQCRDNPEKTPDPQEVSSATDEILAWFESGAVDRVELIYTKFVSLISSRPVTQTLLPLDLQGLEAQDDEVFRLTSKGGKFDVTREKVSVEPEALAQDMIFEQDPVEILNALLPLFLTNQLLRAWQESTASELAARMTAMSNASDNASDLVKTLTLSYNKARQASITQELLEVVAGA

Annotated regions:
Protein sequence:
MEFTASPKPQLSSRANAFSIAALMSSGGSKEKEATENTIKPLEQFVEKSSCAQPLGELTSLDAHGEFGGGSGSSPSSSSLCTEPLIPTTPIIPSEEMAKIACSLETKELWDKFHELGTEMIITKSGRRMFPTIRVSFSGVDPEAKYIVLMDIVPVDNKRYRYAYHRSSWLVAGKADPPLPARLYVHPDSPFTGEQLLKQMVSFEKVKLTNNELDQHGHIILNSMHKYQPRVHIIKKKDHTASLLNLKSEEFRTFIFPETVFTAVTAYQNQLITKLKIDSNPFAKGFRDSSRLTDIERESVESLIQKHSYARSPIRTYGGEEDVLGDESQTTPNRGSAFTTSDNLSLSSWVSSSSSFPGFQHPQSLTALGTSTASIATPIPHPIQGSLPPYSRLGMPLTPSAIASSMQGSGPTFPSFHMPRYHHYFQQGPYAAIQGLRHSSAVMTPFV

Annotated regions:
phrase: GTEMIITKSGRRMFPTIRVSFSGV
type: DOMAIN
name: T-box_DNA-bd
description: T-box transcription factor, DNA-binding domain

phrase: YVHPDSPFTGEQL
type: DOMAIN
name: T-box_DNA-bd
description: T-box transcription factor, DNA-binding domain

phrase: VSFEKVKLT
type: DOMAIN
name: T-box_DNA-bd
description: T-box transcription factor, DNA-binding domain

phrase: ILNSMHKYQPRVHI
type: DOMAIN
name: T-box_DNA-bd
description: T-box transcription factor, DNA-binding domain

phrase: TVFTAVTAYQNQL
type: DOMAIN
name: T-box_DNA-bd
description: T-box transcription factor, DNA-binding domain

phrase: NPFAKGFR
type: DOMAIN
name: T-box_DNA-bd
description: T-box transcription factor, DNA-binding domain

phrase: VHPDSPFTGEQLLKQMVS
type: CONSERVED_SITE
name: TF_T-box_CS
description: Transcription factor, T-box, conserved site

phrase: LWDKFHELGTEMIITKSGR
type: CONSERVED_SITE
name: TF_T-box_CS
description: Transcription factor, T-box, conserved site

phrase: KIACSLETKELWDKFHELGTEMIITKSGRRMFPTIRVSFSGVDPEAKYIVLMDIVPVDNKRYRYAYHRSSWLVAGKADPPLPARLYVHPDSPFTGEQLLKQMVSFEKVKLTNNELDQHGHIILNSMHKYQPRVHIIKKKDHTASLLNLKSEEFRTFIFPETVFTAVTAYQNQLITKLKIDSNPFAKGFRDSSRL
type: DOMAIN
name: T-box_DNA-bd
description: T-box transcription factor, DNA-binding domain

phrase: CSLETKELWDKFHELGTEMIITKSGRRMFPTIRVSFSGVDPEAKYIVLMDIVPVDNKRYRYAYHRSSWLVAGKADPPLPARLYVHPDSPFTGEQLLKQMVSFEKVKLTNNELDQHGHIILNSMHKYQPRVHIIKKKDHTASLLNLKSEEFRTFIFPETVFTAVTAYQNQLITKLKIDSNPFAKGFR
type: DOMAIN
name: T-box_DNA-bd
description: T-box transcription factor, DNA-binding domain

phrase: LETKELWDKFHELGTEMIITKSGRRMFPTIRVSFSGVDPEAKYIVLMDIVPVDNKRYRYAYHRSSWLVAGKADPPLPARLYVHPDSPFTGEQLLKQMVSFEKVKLTNNELDQHGHIILNSMHKYQPRVHIIKKKDHTASLLNLKSEEFRTFIFPETVFTAVTAYQNQLITKLKIDSNPFAKGFR
type: DOMAIN
name: T-box_DNA-bd
description: T-box transcription factor, DNA-binding domain
Protein sequence:
MNSETLFQRSKQVVPGGVHSPVRSFSSVGGTPIFFSEARGAYLKSVEGNDFIDYCLSFGPLLFGHRHPEIQEVVEDTVNKAWSFGACEPYSLELAEFITERIPWVEKIRFVNSGTEAVMSALRVARAATGRNKILKFDGCYHGHLDQLLVKSGSGLAGLSSSDSKGIGPEIIQNTLVLPLDDESKLEELFQREGSNIACLAIEPLPANYGLLPQRIEFLKKCRELTTKYGVLLLFDEVISGFRVSFQGMAGITGIIPDLVCYGKIIGGGFPVGAYAGKRELMDLVAPSGPVYQAGTLSANPIGMRAGLKTLTKAWTENPYPALESATKQLTDGILTLLSEKGDTNWEAVTFGSLFWLKGKTENPIRRIDQIPGTHKSNFATLFHKLLKQGVYLAPSGYEVGFLSTAHTNDIINLTLEKTKKALKD

Annotated regions:
phrase: LLFDEVISGFRVSFQGMAGITGIIPDLVCYGKIIGG
type: CONSERVED_SITE
name: Aminotrans_3_PPA_site
description: Aminotransferases class-III pyridoxal-phosphate attachment site
Protein sequence:
MKIHTTEALMKAEISRRSLMKTSALGSLALASSAFTLPFSQMVRAAEAPVEEKAVWSSCTVNCGSRCLLRLHVKDDTVYWVESDTTGDDVYGNHQVRACLRGRSIRRRMNHPDRLKYPMKRVGKRGEGKFERISWDEALDTISDNLRRILKDYGNEAVHVLYGTGVDGGNITNSNVPYRLMNSCGGFLSRYGSYSTAQISAAMSYMFGANDGNSPDDIANTKLVVMFGNNPAETRMSGGGVTYYVEQARERSNARMIVIDPRYNDTAAGREDEWLPIRPGTDGALACAIAWVLITENMVDQPFLDKYCVGYDEKTLPANAPRNAHYKAYILGEGPDGIAKTPEWAAKITSIPAEKIIQLAREIGSAKPAYICQGWGPQRHSNGEQTSRAIAMLSVLTGNVGINGGNSGVREGSWDLGVEWFPMLENPVKTQISVFTWTDAIDHGTEMTATRDGVRGKEKLDVPIKFLWCYASNTLINQHGDINHTHEVLQDDSKCEMIVGIDHFMTASAKYCDILLPDLMPTEQEDLISHESAGNMGYVILAQPATSAKFERKPIYWMLSEVAKRLGPDVYQTFTEGRSQHEWIKYLHAKTKERNPEMPDYEEMKTTGIFKKKCPEEHYVAFRAFREDPQANPLKTPSGKIEIYSERLAKIADTWELKKDEIIHPLPAYTPGFDGWDDPLRKTYPLQLTGFHYKARTHSSYGNIDVLQQACPQEVWINPIDAQARGIRHGDTVRVFNNNGEMLIAAKVTPRILPGVTAIGQGAWLKADMFGDRVDHGGSINILTSHRPSPLAKGNPSHSNLVQIEKV

Annotated regions:
phrase: RLKYPMKRVGKRGEGKFERISWDEALDTISDNLRRILKDYGNEAVHVLYGTGVDGGNITNSNVPYRLMNSCGGFLSRYGSYSTAQISAAMSYMFGANDGNSPDDIANTKLVVMFGNNPAETRMSGGGVTYYVEQARERSNARMIVIDPRYNDTAAGREDEWLPIRPGTDGALACAIAWVLITENMVDQPFLDKYCVGYDEKTLPANAPRNAHYKAYILGEGPDGIAKTPEWAAKITSIPAEKIIQLAREIGSAKPAYICQGWGPQRHSNGEQTSRAIAMLSVLTGNVGINGGNSGVREGSWDLGVEWFPMLENPVKTQISVFTWTDAIDHGTEMTATRDGVRGKEKLDVPIKFLWCYASNTLINQHGDINHTHEVLQDDSKCEMIVGIDHFMTASAKYCDILLPDLMPTEQEDLISHESAGNMGYVILAQPATSAKFERKPIYWMLSEVAK
type: DOMAIN
name: Mopterin_OxRdtase
description: Molybdopterin oxidoreductase

phrase: AQARGIRHGDTVRVFNNNGEMLIAAKV
type: CONSERVED_SITE
name: Mopterin_OxRdtase_prok_CS
description: Molybdopterin oxidoreductase, prokaryotic, conserved site

phrase: MKIHTTEALMKAEISRRSLMKTSALGSLALASSAFTLPFSQMVRAAE
type: CONSERVED_SITE
name: TAT_signal
description: Twin-arginine translocation pathway, signal sequence

phrase: EKAVWSSCTVNCGSRCLLRLHVKDDTVYWVESDTTGDDVYGNHQVRACLRGRSIRRRMN
type: DOMAIN
name: Mopterin_OxRdtase_4Fe-4S_dom
description: Molybdopterin oxidoreductase, 4Fe-4S domain

phrase: EKAVWSSCTVNCGSRCLLRLHVKDDTVYWVESDTTGDDVYGNHQVRACLRGRSIRRRMN
type: DOMAIN
name: Mopterin_OxRdtase_4Fe-4S_dom
description: Molybdopterin oxidoreductase, 4Fe-4S domain

phrase: EKAVWSSCTVNCGSRCLLRLHVKDDTVYWVESDTTGDDVYGNHQVRACLRGRSIRRRMNHP
type: DOMAIN
name: Mopterin_OxRdtase_4Fe-4S_dom
description: Molybdopterin oxidoreductase, 4Fe-4S domain

phrase: SSCTVNCGSRCLLRLHVKD
type: BINDING_SITE
name: MopterinOxRdtase_cofactor_BS
description: Molybdopterin oxidoreductase, molybdopterin cofactor binding site

phrase: LQLTGFHYKARTHSSYGNIDVLQQACPQEVWINPIDAQARGIRHGDTVRVFNNNGEMLIAAKVTPRILPGVTAIGQGAWLKADMFGDRVDHGGSINILTSHRPSPLAKGNPSH
type: DOMAIN
name: MoPterin_dinucl-bd_dom
description: Molybdopterin dinucleotide-binding domain
Protein sequence:
MSMSSSNITSGFIDIATFDEIEKYMYGGPTATAYFVREIRKSTWFTQVPVPLSRNTGNAAFGQEWSVSISRAGDYLLQTWLRVNIPQVTLNPLLAATFSLRWTRNLMHNLIREATITFNDLVAARFDNYHLDFWSAFTVPASKRTGYDNMIGNVSSLINPVAPGGNLGSTGGTNLNLPLPFFFSRDTGVALPTAALPYNEMQINFNFRDWTELLVLQNSALVAPASPYVPIVVPTHLTVAPVLGPVQVWANYAIVSNEERRRMGCAIRDILIEQVQTAPRQNYTPLTNASPTFDIRFSHAIKALFFSVRNKTSASEWSNYATSSPVVTGATVNFEPTGSFDPIANTTLIYENTNRLGAMGSDYFSLINPFYHAPTIPSFIGYHLYSYSLHFYDLDPMGSTNYGKLTNVSVVPQASPAAVNAASGAGGFPGSDYPQSYEFVIVAVNNNIVRISGGETPQNYLSGSFVTLLNRRKWSREGPMIMVQ

Annotated regions:
phrase: YFVREIRKSTWFTQVPVPLSRNTGNAAFGQEWSVSISRAGDYLLQTWLRVNIPQVTLNPLLAATFSLRWTRNLMHNLIREATITFNDLVAARFDNYHLDFWSAFTVPASKRTGYDNMIGNVSSLINPVAPGGNLGSTGGTNLNLPLPFFFSRDTGVALPTAALPYNEMQINFNFRDWTELLVLQNSALVAPASPYVPIVVPTHLTVAPVLGPVQVWAN
type: DOMAIN
name: Capsid_N
description: Major capsid protein, N-terminal

phrase: ERRRMGCAIRDILIEQVQTAPRQNYTPLTNASPTFDIRFSHAIKALFFSVRNKTSASEWSNYATSSPVVTGATVNFEPTGSFDPIANTTLIYENTNRLGAMGSDYFSLINPFYHAPTIPSFIGYHLYSYSLHFYDLDPMGSTNYGKLTNVSVVPQASPAAVNAASGAGGFPGSDYPQSYEFVIVAVNNNIVRISG
type: DOMAIN
name: MCP_C
description: Major capsid protein, C-terminal