nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSDIKDGNNDHLVQSDDPEHPANLIPALCRNFYSHGWVTGTGGGASIKRDNHIFIAPSGVQKELIQPHNIFVLSYPTPKYPPSARQYIRKPLKLNPSACTPLFLAAFERGAGCCIHTHSQWAVLVTLLVEREKGPEGCFEISNIEQIKGIPRGKGKGMMGFYDTLKIPIIENTAFEEDLTQSLEEAMEMYPDTYAVLVRRHGIYVWGDDVAKAKTQCESLDYLFQLAVEMHRLGLPWVKS

Annotated regions:
phrase: NLIPALCRNFYSHGWVTGTGGGASIKRDNHIFIAPSGVQKELIQPHNIFVLSYPTPKYPPSARQYIRKPLKLNPSACTPLFLAAFERGAGCCIHTHSQWAVLVTLLVEREKGPEGCFEISNIEQIKGIPRGKGKGMMGFYDTLKIPIIENTAFEEDLTQSLEEAMEMYPDTYAVLVRRHGIYVWGDDVAKAKTQCESLDYLFQLA
type: DOMAIN
name: Aldolase_II/adducin_N
description: Class II aldolase/adducin N-terminal

phrase: IPALCRNFYSHGWVTGTGGGASIKRDNHIFIAPSGVQKELIQPHNIFVLSYPTPKYPPSARQYIRKPLKLNPSACTPLFLAAFERGAGCCIHTHSQWAVLVTLLVEREKGPEGCFEISNIEQIKGIPRGKGKGMMGFYDTLKIPIIENTAFEEDLTQSLEEAMEMYPDTYAVLVRRHGIYVWGDDVAKAKTQCESLDYLFQL
type: DOMAIN
name: Aldolase_II/adducin_N
description: Class II aldolase/adducin N-terminal
Protein sequence:
MQKIRKGDKVVVLTGKDKGRTGEVIQVMPKEDRALVRGVNVVKRHQRQTQNQEAGIITKEASIHLSNIAIADPKDGKPTRVGFKIDGDKKVRVAKRSGDVIDG

Annotated regions:
phrase: GDKVVVLTGKDKGRTGEVIQVMPKEDRALVRGVNVVKRHQRQTQNQEAGIITKEASIHLSNIA
type: DOMAIN
name: Ribosomal_uL24_KOW
description: Large ribosomal subunit protein uL24, KOW domain

phrase: KIRKGDKVVVLTGKDKGRTGEVIQVMP
type: DOMAIN
name: KOW
description: KOW

phrase: KGDKVVVLTGKDKGRTGEVIQVMPKEDRAL
type: DOMAIN
name: KOW
description: KOW

phrase: GDKVVVLTGKDKGRTGE
type: CONSERVED_SITE
name: Ribosomal_uL24_CS
description: Large ribosomal subunit protein uL24, conserved site
Protein sequence:
MAAGRGERAGASVEGPKQYRRIGDRPVIAHTLEVFATWPQATEIVAVIHADDEALFAKATAGVAFRLPIATVHGGSTRQQSVLAGLRHLQDKGITHVMIHDAVRPFFDHDLLDRVMATLAEGAPAVLPAMPVADTLKRADQSGIVVETVPRAQLHAAQTPQSFDFGIILAAHAQAAAADRNDFSDDAAIAEWAGHPVTIVEGMADNVKLTVRRDIAMADQRLSSTRLPDVRTGNGYDVHQLEAGDGVTLCGVFIPHDQKLKGHSDADVALHALTDALLATCGAGDIGDHFPPSDPQWKGAPSRIFIEHAAKIVRERGGTVMNADVTLIAEAPKVGPHRDTMRAMLSEFLGISIDRCSVKATTNETIGFVGRREGIAAIATATVVYQEISQ

Annotated regions:
phrase: RTGNGYDVHQLEAGDGVTLCGVFIPHDQKLKGHSDADVALHALTDALLATCGAGDIGDHFPPSDPQWKGAPSRIFIEHAAKIVRERGGTVMNADVTLIAEAPKVGPHRDTMRAMLSEFLGISIDRCSVKATTNETIGFVGRREGIAAIATAT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: ADQRLSSTRLPDVRTGNGYDVHQLEAGDGVTLCGVFIPHDQKLKGHSDADVALHALTDALLATCGAGDIGDHFPPSDPQWKGAPSRIFIEHAAKIVRERGGTVMNADVTLIAEAPKVGPHRDTMRAMLSEFLGISIDRCSVKATTNETIGFVGRREGIAAIATATV
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RTGNGYDVHQLEAGDGVTLCGVFIPHDQKLKGHSDADVALHALTDALLATCGAGDIGDHFPPSDPQWKGAPSRIFIEHAAKIVRERGGTVMNADVTLIAEAPKVGPHRDTMRAMLSEFLGISIDRCSVKATTNETIGFVGRREGIAAIATATV
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: VRTGNGYDVHQLEAGDGVTLCGVFIPHDQKLKGHSDADVALHALTDALLATCGAGDIGDHFPPSDPQWKGAPSRIFIEHAAKIVRERGGTVMNADVTLIAEAPKVGPHRDTMRAMLSEFLGISIDRCSVKATTNETIGFVGRREGIAAIATATVV
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: VMIHDAV
type: CONSERVED_SITE
name: ISPD_synthase_CS
description: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site

phrase: RTGNGYDVHQLEAGDGVTLCGVFIPHDQKLKGHSDADVALHALTDALLATCGAGDIGDHFPPSDPQWKGAPSRIFIEHAAKIVRERGGTVMNADVTLIAEAPKVGPHRDTMRAMLSEFLGISIDRCSVKATTNETIGFVGRREGIAAIATAT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: SDADVALHALTDALL
type: CONSERVED_SITE
name: MECDP_synthase_CS
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site
Protein sequence:
MKISDVVVELFREAAIYLPEDVKNALEEAYKKESSEISKNTLKAIIENNKIAEETQVPLCQDTGVPIVFLKIGKNINSSEIMKIIEEIKEGVKKATEEVPLRPNVVHPLTRENFKTNVGLNSPFINIEFDESLDREIEIIAFPKGAGSENMSALKMLKPSDGIEGIKNFVLETIANAGGKPCPPIVVGIGIGGTADVALKLAKKALLRKIGERHRDKEIANLEKELLEKINSLGIGAMGLGGDITALDVFIEIAGCHTASLPVGICIQCWADRRAIKRIKLDAKL

Annotated regions:
phrase: DVVVELFREAAIYLPEDVKNALEEAYKKESSEISKNTLKAIIENNKIAEETQVPLCQDTGVPIVFLKIGKNINSSEIMKIIEEIKEGVKKATEEVPLRPNVVHPLTRENFKTNVGLNSPFINIEFDESLDREIEIIAFPKGAGSENMSALKMLKPSDGIEGIKNFVLETIANAGGKPCPPIVVGIGIGGTADVALKLAKKALLRKIGERHRDKEIANLEKELLEKINSLGIGAMGLGGDITALDVFIEIAGCHTASLPVGICIQCWADRR
type: DOMAIN
name: Fe-S_hydro-lyase_TtdA-typ_cat
description: Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain

phrase: ISDVVVELFREAAIYLPEDVKNALEEAYKKESSEISKNTLKAIIENNKIAEETQVPLCQDTGVPIVFLKIGKNINSSEIMKIIEEIKEGVKKATEEVPLRPNVVHPLTRENFKTNVGLNSPFINIEFDESLDREIEIIAFPKGAGSENMSALKMLKPSDGIEGIKNFVLETIANAGGKPCPPIVVGIGIGGTADVALKLAKKALLRKIGERHRDKEIANLEKELLEKINSLGIGAMGLGGDITALDVFIEIAGCHTASLPVGICIQCWADRRAIKR
type: DOMAIN
name: Fe-S_hydro-lyase_TtdA-typ_cat
description: Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain
Protein sequence:
MDWKEVLRRRLATPNTCPNKKKSEQELKDEEMDLFTKYYSEWKGGRKNTNEFYKTIPRFYYRLPAEDEVLLQKLREESRAVFLQRKSRELLDNEELQNLWFLLDKHQTPPMIGEEAMINYENFLKVGEKAGAKCKQFFTAKVFAKLLHTDSYGRISIMQFFNYVMRKVWLHQTRIGLSLYDVAGQGYLRESDLENYILELIPTLPQLDGLEKSFYSFYVCTAVRKFFFFLDPLRTGKIKIQDILACSFLDDLLELRDEELSKESQETNWFSAPSALRVYGQYLNLDKDHNGMLSKEELSRYGTATMTNVFLDRVFQECLTYDGEMDYKTYLDFVLALENRKEPAALQYIFKLLDIENKGYLNVFSLNYFFRAIQELMKIHGQDPVSFQDVKDEIFDMVKPKDPLKISLQDLINSNQGDTVTTILIDLNGFWTYENREALVANDSENSADLDDT

Annotated regions:
phrase: DKDHNGMLSKEE
type: BINDING_SITE
name: EF_Hand_1_Ca_BS
description: EF-Hand 1, calcium-binding site

phrase: VAGQGYLRESDLENYILELIPTLPQLDGLEKSFYSFYVCTAVRKFFFFLDPLRTGKIKIQDILACSFLDDLLELRD
type: DOMAIN
name: EF-hand_13
description: PP2A regulatory subunit B'', EF-hand domain
Protein sequence:
MSFASRNIGRKIAGVGVDIVYLPRFAHILEKYSPFDPCGRSTLNKITRKFMHEKERFHFSNLLIEENCLTPRLHEYIAGVWALKECSLKALCCCVSKHDLPPAQVLYAGMLYKTQTDTGVPQLEFDKMFGKKYPKYQQLSKNYDSLFSTHEFLVSLSHDKDYLIAVTNLVERE

Annotated regions:
phrase: GVGVDIVYLPRFAHILEKYSPFDPCGRSTLNKITRKFMHEKERFHFSNLLIEENCLTPRLHEYIAGVWALKECSLKALCCCVSKHDLPPAQVLYAGMLYKTQTDTGVPQLEFDKMFG
type: DOMAIN
name: 4-PPantetheinyl_Trfase_dom
description: 4'-phosphopantetheinyl transferase domain
Protein sequence:
MPPGPRGVASGKPVISGQDQKYTLADSSKDLEGIAHMAIVDSLSPLHISLSSLESAWNNLLNIASQEDYSIPELSIPKIDVKSILSCKPKYSPKYPVVLQYISDHYVQVQDHIANAKELTEGLKFVSQLIMYKKIDHDTLASVSKMLSNYLTDYASTISSLKSVVCQDQTAPSHPMDESYMDTPLSMILKGTMPTGAGVDKGFALGGGGVGKGFNLNGGGVGKGFDLNGGGVGKGFDLNGGGVGKGFDLNGGGVGKGFDLNGGGVGKGFALGGGGVGKGFSLTGGGVGREVEIKDW

Annotated regions:
Protein sequence:
MLYYVIKRLLGLIPTLFIVSVLVFLFVHMLPGDPARLIAGPEADAQVIELVRQQLGLDQPLYHQFWHYISNAVQGDFGLSMVSRRPVADEIASRFMPTLWLTITSMVWAVIFGMAAGIIAAVWRNRWPDRLSMTIAVSGISFPAFALGMFLIQVFSVELGWLPTVGADSWQHYILPSLTLGAAVAAVMARFTRASFVDVLSEDYMRTARAKGVSETWVVLKHGLRNAMIPVVTMMGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLFSLEFILINLVVDVLYAAINPAIRYK

Annotated regions:
phrase: GMAAGIIAAVWRNRWPDRLSMTIAVSGISFPAFALGMFLIQVFSVELGWLPTVGADSWQHYILPSLTLGAAVAAVMARFTRASFVDVLSEDYMRTARAKGVSETWVVLKHGLRNAMIPVVTMMGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLFSLEFILINLVVDVLYAAINPAI
type: DOMAIN
name: MetI-like
description: ABC transporter type 1, transmembrane domain MetI-like

phrase: FMPTLWLTITSMVWAVIFGMAAGIIAAVWRNRWPDRLSMTIAVSGISFPAFALGMFLIQVFSVELGWLPTVGADSWQHYILPSLTLGAAVAAVMARFTRASFVDVLSEDYMRTARAKGVSETWVVLKHGLRNAMIPVVTMMGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLFS
type: DOMAIN
name: MetI-like
description: ABC transporter type 1, transmembrane domain MetI-like

phrase: FMPTLWLTITSMVWAVIFGMAAGIIAAVWRNRWPDRLSMTIAVSGISFPAFALGMFLIQVFSVELGWLPTVGADSWQHYILPSLTLGAAVAAVMARFTRASFVDVLSEDYMRTARAKGVSETWVVLKHGLRNAMIPVVTMMGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLFSLEFILINLV
type: DOMAIN
name: MetI-like
description: ABC transporter type 1, transmembrane domain MetI-like

phrase: MLYYVIKRLLGLIPTLFIVSVLVFLFVHMLPGDPARLIAGPEADAQVIELVRQQLGLDQPLYHQFWHYISNAVQGDFGLSMV
type: DOMAIN
name: BPD_transp_1_N
description: ABC transporter type 1, GsiC-like, N-terminal domain
Protein sequence:
MKHSSGLIVFDMDSTLIHIECIDEIARLNNRYTKVSAITEAAMRGEIDFAESLTQRVACLEGIKESDLESLFSPIPFNPGAKELIQALQAAGWKTALVSGGFTWFANRVQAALNLDAVVANQLEVADGCLTGKVLGDIVDAQVKAEQLQQLAGHWNIPPDRTVAVGDGANDGLMLKAAAVGIAFNAKPALQAIADYSVNSNNLLEILGCLKQSELIEPVI

Annotated regions:
Protein sequence:
MGVPDCLALPLLVTFLLLSLGLPVLGAPPRLICDSRVLERYILEAKEAENITMGCAEGPRFNENFTVPDTKVNFYAWKTMGVEEQAVEVWQGLSLLFEAILQAQAVLANSSQPSEMLQLHVDKAISGLRSLTSLLRALGAQKEAISPPDTTQVIPLRRFTVDTFCKLFRIYSNFLRGKLKLYTGEACRRGDR

Annotated regions:
phrase: PPRLICDSRVLERYILEAKEAENITMG
type: CONSERVED_SITE
name: EPO/TPO_CS
description: Erythropoietin/thrombopoeitin, conserved site
Protein sequence:
MAAKEVVFGNDARVKMLAGVNILANAVKVTLGPKGRNVVLDKSFGSPLITKDGVSVAKEIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVTEGLKAVAAGMNPMDLKRGIDKAVAAAVIELKNLSQDCADSKAIAQVGTISANSDESIGQIIATAMEKVGKEGVITVEEGQALENELDVVEGMQFDRGYLSPYFINKPETGSVELDHPFVLLVDKKISNIRELLPILEGLAKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDVAILTGGTVIAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGEQAQIEARVSQIKQQIEESTSDYDKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRVASKIADVEVANEDQKHGVVIALRAMEAPLRQIATNAGEEASVVANTVKNGSGNYGYNAGNDTYGDMLEMGILDPTKVTRSALQFAASIAGLMITTEAMVAELPKADAPDMGGMGGMGGMGGMM

Annotated regions:
phrase: AAVEEGVVPGG
type: CONSERVED_SITE
name: Chaperonin_Cpn60_CS
description: Chaperonin Cpn60, conserved site
Protein sequence:
MNSRQMYEKIKERLVAHRHWTFRFDAKQDAMRVEDRRTKKGVTISLPGVIAKWHEQKDEAVREVVYYVEETLKTMEEDAALSGNERNIYPVIRSASFPTETKEGIPLLFDDHTAETRIYYALDLGKTYRLIDERMLEKDKWSRERVKEIARFNVRSLPTPVKEDRVADNVFYFVNTNDGYDASRILNESFLAGMRARVEGTMAVAVPHQDVLIIADVRNDIGYDVLAQMTMSFFAGGRVPITALSFLYENGKLEPIFILGKKRRT

Annotated regions:
Protein sequence:
MAEEQVNLSAGLAPDCEASATAESTVSLVGTCEAAAKSPEPKDSDSTCVFCRIAGRQDPGTELLHCENEDLICFKDIKPAATHHYLVVPKKHIGNCRTLRKDQVELVENMVTVGKTILERNNFTDFTNVRMGFHMPPFCSISHLHLHVLAPVDQLGFLSKLVYRVNSYWFITADHLIEKLRT

Annotated regions:
phrase: VFCRIAGRQDPGTELLHCENEDLICFKDIKPAATHHYLVVPKKHIGNCRTLRKDQVELVENMVTVGKTILERNNFTDFTNVRMGFHMPPFCSISHLHLHVLAPVDQLGFLS
type: DOMAIN
name: HIT-like
description: HIT-like domain
Protein sequence:
MTQDNSQAKAKAPAKSARRRARELALQGLYQWLLNRNDPGVVEAHLQDAQGFNKADRAHFDALLHGAIREETTLTEAFTPYLDRPVAELSPVERAALLVGAYELVHCVDIPYKVVINEAVELTKTFGGVEGYKYVNGVLDKLATQVRAVEVAARR

Annotated regions:
phrase: RRARELALQGLYQWLLNRNDPGVVEAHLQDAQGFNKADRAHFDALLHGAIREETTLTEAFTPYLDRPVAELSPVERAALLVGAYELVHCVDIPYKVVINEAVELTKTFGGVEGYKYVNGVLDKL
type: DOMAIN
name: NusB_RsmB_TIM44
description: NusB/RsmB/TIM44
Protein sequence:
MTQSEKIINLTNHYGAHNYVPLPIVISEAEGVWVKDPEGNTYMDMLSAYSAVNQGHRHPRIIQALKDQADKVTLVSRAFHSDNLGQWHEKICKLAGKDKALPMNTGAEAVETALKAARRWAYDVKGIEPNKAEIIAFNGNFHGRTMAPVSLSSEAEYQRGYGPLLEGFRKVEFGDVNQLKAAINKNTAAILVEPIQGEAGINVPPEGYLKTIRELCDEHQILFIADEIQAGLGRSGKLFATDWDHVKPDVYILGKALGGGVFPISVVLADNEVLDVFTPGSHGSTFGGNPLASAVSIAAIDVIIDEDLPGRSLELGEYFKSELKKIEHPSIKEVRGRGLFIGIELHESARPYCEALKEQGLLCKETHDTVIRFAPPLVITKEELDMALEKIKSVFA

Annotated regions:
phrase: FIADEIQAGLGRSGKLFATDWDHVKPDVYILGKALGG
type: CONSERVED_SITE
name: Aminotrans_3_PPA_site
description: Aminotransferases class-III pyridoxal-phosphate attachment site
Protein sequence:
MSDIAPVTNTPYIPPTPEVGLPLWLLAELTYRCPLQCPYCSNPLDFAKQGQELTTEQWFKVMQEAREMGAAQIGFSGGEPLVRQDLAELIAEARRLGFYTNLITSGIGLTKEKIIAFKEAGLDHIQISFQASDEQVNNMLAGSKKAFAQKLEMAKAVKKHGYPMVLNFVTHRHNIDRIDKIIELCLALEADFVELATCQFYGWAHLNRLGLLPTKDQLVRAEAVTNEYRVRLEAENHPCKLIFVTPDYYEERPKACMNGWGNIFLTVTPDGTALPCHGARQMPIQFPNVRDYSMQHIWYDSFGFNRFRGYDWMPEPCRSCDEKEKDFGGCRCQAFMLTGDAANADPVCSKSYHHGIITQARDESETATQTIEELAFRNDRNSRLIAKSS

Annotated regions:
phrase: LTYRCPLQCPY
type: CONSERVED_SITE
name: MoaA_NifB_PqqE_Fe-S-bd_CS
description: MoaA/NifB/PqqE, iron-sulphur binding, conserved site

phrase: WGNIFLTVTPDGTALPCHGARQMPIQFPNVRDYSMQHIWYDSFGFNRFRGYDWMPEPCRSC
type: DOMAIN
name: 4Fe4S-binding_SPASM_dom
description: 4Fe4S-binding SPASM domain

phrase: VGLPLWLLAELTYRCPLQCPYCSNPLDFAKQGQELTTEQWFKVMQEAREMGAAQIGFSGGEPLVRQDLAELIAEARRLGFYTNLITSGIGLTKEKIIAFKEAGLDHIQISFQASDEQVNNMLAGSKKAFAQKLEMAKAVKKHGYPMVLNFVTHRHNIDRIDKIIELCLALEADFVELATCQFYGWAHLNRLGLLPTKDQLVRAEAVTNEYRVRLEA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: IFLTVTPDGTALPCHGARQMPIQFPNVRDYSMQHIWYDSFGFNRFRGYDWMPEPCRSCDEKEKDFGGCRCQAFMLTGDAANADPV
type: DOMAIN
name: 4Fe4S-binding_SPASM_dom
description: 4Fe4S-binding SPASM domain

phrase: LTYRCPLQCPYCSNPLDFAKQGQELTTEQWFKVMQEAREMGAAQIGFSGGEPLVRQDLAELIAEARRLGFYTNLITSGIGLTKEKIIAFKEAGLDHIQISFQASDEQVNNMLAGSKKAFAQKLEMAKAVKKHGYPMVLNFVTHRHNIDRIDKIIEL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LWLLAELTYRCPLQCPYCSNPLDFAKQGQELTTEQWFKVMQEAREMGAAQIGFSGGEPLVRQDLAELIAEARRLGFYTNLITSGIGLTKEKIIAFKEAGLDHIQISFQASDEQVNNMLAGSKKAFAQKLEMAKAVKKHGYPMVLNFVTHRHNIDRIDKIIELCLALEADFVELATCQFYGWAHLNRLGLLPTKDQLVRAEA
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain
Protein sequence:
MSEELWVEKYRPRSLDEIVDQEEIVKRLKEFVKNKNMPHLLFAGPPGTGKTTAALALAHDLYGESWRDNTLELNASDERGIDVIRSRIKDYARTLPIGDVPFKLVILDEADNMTGDAQQALRRTMELFSRNTRFILIANYASKIIEPIQSRCAVFRFQPLPKGDAFQRLRWIAQQEGITVDDGALEAIWEESQGDLRKAINTLQAASAISRNVTEEVVYAALGRVKPKEVREMIESALKGNLLEARDKLRLLLYNYGLSGVDIIRFIHREVLSQKSVRLDDATLAELLVLVGETNYRIVEGSDDEIQLMALLSKLALVSKKAAKG

Annotated regions:
phrase: NMPHLLFAGPPGTGKTTAALALAHDLYGESWRDNTLELNASDERGIDVIRSRIKDYARTLPIGDVPFKLVILDEADNMTGDAQQALRRTMELFSRNTRFILIANYASKIIEPIQSRCAVFRFQPLPKG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: KPKEVREMIESALKGNLLEARDKLRLLLYNYGLSGVDIIRFIHREVLSQKSVRLDDATLAELLVLVGETNYRIVEGSDDEIQLMALLS
type: DOMAIN
name: Rep_factorC_C
description: Replication factor C, C-terminal

phrase: LLFAGPPGTGKTTAALALAHDLYGESWRDNTLELNASDERGIDVIRSRIKDYARTLPIGDVPFKLVILDEADNMTGDAQQALRRTMELFSRNTRFILIANYASKIIEPIQSRCAVFRF
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: LPKGDAFQRLRWIAQQEGITVDDGALEAIWEESQGDLRKAINTLQAASAISRNVTEEVVY
type: DOMAIN
name: RFC_lid
description: Replication factor C, lid domain
Protein sequence:
MHPVLPTTSTLPLFDVAASRRIEARALAHSPDLMERAGLAVAKLALALRRGAGPVWVVCGPGNNGGDGHVAARRLAEVGVPTHVSHDAPQYPSLVIDALLGLGLNRAPSPELLAPIVAMGNCGAPVLAVDLPSGLLADTGQLAGEHAVRADHTLTLLTLKPGLFTGEGRAHAGRIWFDELGIAPDEPPTANLLGLGAALHRSPTSHKGSHGQVLVVGGAPGMQGAARLAARAALACGAGRVYLDLLGLGPAEVADSGWLELMRGRLTELPQAVGVIGCGAGDAITPHLPSLLQTLPRLVIDADALNAIAADTTLQSLVRTRPAGSTLLTPHPLEAARLLNRGTTAIQADRLVAAQELALQLGCTVVLKGSGSVITSPAERPALCASGGPALATAGSGDVLAGWLGGLWAQQPSATAHAIACTGVDAHGRAGEYGGVLRAGELIERLAALR

Annotated regions:
phrase: AGSGDVLAGW
type: CONSERVED_SITE
name: Carbohydrate_kinase_pred_CS
description: Carbohydrate kinase, predicted, conserved site

phrase: SRRIEARALAHSPDLMERAGLAVAKLALALRRGAGPVWVVCGPGNNGGDGHVAARRLAEVGVPTHVSHDAPQYPSLVIDALLGLGLNRAPSPELLAPIVAMGNCGAPVLAVDLPSGLLADTGQLAGEHAVRADHTLTLLTLKPGLFTGEGRAHAGRIWFDELGIAPDEP
type: DOMAIN
name: YjeF_N_dom
description: YjeF N-terminal domain

phrase: TTSTLPLFDVAASRRIEARALAHSPDLMERAGLAVAKLALALRRGAGPVWVVCGPGNNGGDGHVAARRLAEVGVPTHVSHDAPQYPSLVIDALLGLGLNRAPSPELLAPIVAMGNCGAPVLAVDLPSGLLADTGQLAGEHAVRADHTLTLLTLKPGLFTGEGRAHAGRIWFDELGI
type: DOMAIN
name: YjeF_N_dom
description: YjeF N-terminal domain

phrase: PTSHKGSHGQVLVVGGAPGMQGAARLAARAALACGAGRVYLDLLGLGPAEVADSGWLELMRGRLTELPQAVGVIGCGAGDAITPHLPSLLQTLPRLVIDADALNAIAADTTLQSLVRTRPAGSTLLTPHPLEAARLLNRGTTAIQADRLVAAQELALQLGCTVVLKGSGSVITSPAERPALCASGGPALATAGSGDVLAGWLGGLWAQQPSATAHAIACTGVDAHGRAG
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: YPSLVIDALLGLGLNRAPSPELLAPIVAMGNCGAPVLAVDLPSGLLADTGQLAGEHAVRADHTLTLLTLKP
type: DOMAIN
name: YjeF_N_dom
description: YjeF N-terminal domain

phrase: DLMERAGLAVAKLALALRRGAGPVWVVCGPGNNGGDGHVAARRLAEVGVPTH
type: DOMAIN
name: YjeF_N_dom
description: YjeF N-terminal domain

phrase: ANLLGLGAALHRSPTSHKGSHGQVLVVGGAPGMQGAARLAARAALACGAGRVYLDLLGLGPAEVADSGWLELMRGRLTELPQAVGVIGCGAGDAITPHLPSLLQTLPRLVIDADALNAIAADTTLQSLVRTRPAGSTLLTPHPLEAARLLNRGTTAIQADRLVAAQELALQLGCTVVLKGSGSVITSPAERPALCASGGPALATAGSGDVLAGWLGGLWAQQPSATAHAIACTGVDAHGRAGEYGGVLRAGELIERLA
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: VLVVGGAPGMQGAARLAARAALACGAGRVYLDLLGLGPAEVADSGWLELMRGRLTELPQAVGVIGCGAGDAITPHLPSLLQTLPRLVIDADALNAIAADTTLQSLVRTRPAGSTLLTPHPLEAARLLNRGTTAIQADRLVAAQELALQLGCTVVLKGSGSVITSPAERPALCASGGPALATAGSGDVLAGWLGGLWAQQPSATAHAIACTGVDAHGRAG
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: ANLLGLGAALHRSPTSHKGSHGQVLVVGGAPGMQGAARLAARAALACGAGRVYLDLLGLGPAEVADSGWLELMRGRLTELPQAVGVIGCGAGDAITPHLPSLLQTLPRLVIDADALNAIAADTTLQSLVRTRPAGSTLLTPHPLEAARLLNRGTTAIQADRLVAAQELALQLGCTVVLKGSGSVITSPAERPALCASGGPALATAGSGDVLAGWLGGLWAQQPSATAHAIACTGVDAHGRAGEYGGVLRAGELIERLAAL
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase
Protein sequence:
MSRPEHIAPPEIFYNDVEAGKYSTNTRIQSIQTEMSERALELLDAEGPSFILDIGCGSGISTQIGESQGHVVVGMDISPSMLSVALESQEIEGDLLLCDMGTGVPFRPGTFDGVISISAIQWLLNADKTCNVPQRRLNRFFQTLYISMKRGGRAVMQYYPETEKSQQMIMDTARKAGFAGGIVVDHPESKRQKKYYLVLQAGGTRTLDISSMTLDQEGTNAKQRKLKKKQDMSTREYIIHKKELNRKRGRLHVPKDSKYSGRRRKAAF

Annotated regions:
phrase: LDIGCGSGISTQIGESQGHVVVGMDISPSMLSVALESQEIEGDLLLCDMGTGVPFRPGTFDGVISISAIQWLLNADKTCNVPQRRLNRFFQTLYISMKRGGR
type: DOMAIN
name: Methyltransf_11
description: Methyltransferase type 11

phrase: LDQEGTNAKQRKLKKKQDMSTREYIIHKKELNRKRGRLHVPKDSKYSGRRR
type: DOMAIN
name: Bud23_C
description: 18S rRNA (guanine(1575)-N(7))-methyltransferase Bud23, C-terminal
Protein sequence:
MMKIFNTLKNKKEKFKPINSNIVNVYVCGITPYDLCHIGHARTLVFFDIMIKYFQYKGYRTNYIRNITDIDDKIINKAFHKKEKYNLLSDFMIKEMKYDLNSLNIMPPNNEPRVTNHISDILEMIKILLEKKHAYISKTGDVVFDISTYRDYGKLSKRFEEKKQLLNNKKNKINFKTKKEKDFVLWKMSKPNEPSWKSPWGHGRPGWHIECSAISDKTLGNIFDIHGGGSDLIFPHHENEIAQSKCANSKFNVNFWVHTGMVMFKKEKMSKSLGNSCLIREIVKKYDADTLKYFLTSSHYRSQITYSVDNMEKSKSAVKRLYRSLHNTNYFYNLPIKEKFTSKFIDAMNDDFNTPKAYSVLFSISRQINYFKNKNPEKANQLSTVLKNLSNIIGILNENPDSYLNNKLKFSKDKINKIKSIIKKRENYRKLKQWEKADEERKKLKYIGVCLEDTIQGTKWFKL

Annotated regions:
phrase: KFIDAMNDDFNTPKAYSVLFSISRQINYFKNKNPEKANQLSTVLKNLSNIIGI
type: DOMAIN
name: Cys-tRNA-synt_Ia_DALR
description: Cysteinyl-tRNA synthetase, class Ia, DALR

phrase: KFIDAMNDDFNTPKAYSVLFSISRQINYFKNKNPEKANQLSTVLKNLSNIIGILNENPDSY
type: DOMAIN
name: Cys-tRNA-synt_Ia_DALR
description: Cysteinyl-tRNA synthetase, class Ia, DALR

phrase: KIFNTLKNKKEKFKPINSNIVNVYVCGITPYDLCHIGHARTLVFFDIMIKYFQYKGYRTNYIRNITDIDDKIINKAFHKKEKYNLLSDFMIKEMKYDLNSLNIMPPNNEPRVTNHISDILEMIKILLEKKHAYISKTGDVVFDISTYRDYGKLSKRFEEKKQLLNNKKNKINFKTKKEKDFVLWKMSKPNEPSWKSPWGHGRPGWHIECSAISDKTLGNIFDIHGGGSDLIFPHHENEIAQSKCANSKFNVNFWVHTGMVMFKKEKMSKSLGNSCLIREIVKKYDADTLKYFLTSSHYRSQITY
type: DOMAIN
name: tRNA-synt_1_cat_dom
description: tRNA synthetases class I, catalytic domain

phrase: FKPINSNIVNVYVCGITPYDLCHIGHARTLVFFDIMIKYFQYKGYRTNYIRNITDIDDKIINKAFHKKEKYNLLSDFMIKEMKYDLNSLNIMPPNNEPRVTNHISDILEMIKILLEKKHAYISKTGDVVFDISTYRDYGKLSKRFEEKKQLLNNKKNKINFKTKKEKDFVLWKMSKPNEPSWKSPWGHGRPGWHIECSAISDKTLGNIFDIHGGGSDLIFPHHENEIAQSKCANSKFNVNFWVHTGMVMFKKEKMSKSLGNSCLIREIVKKYDADTLKYFLTSSHYRSQITYSVDNMEKS
type: DOMAIN
name: tRNA-synt_1_cat_dom
description: tRNA synthetases class I, catalytic domain
Protein sequence:
MSMQDPIADMLTRIRNGQSANKVAVTMPSSKLKVAIANVLKEEGFIEDFKVEGDAKPVLELALKYFQGKAVVESIQRISRPGLRIYKKKDELPKVMAGLGIAVISTSKGVMTDRAARQAGLGGEIICYVA

Annotated regions:
phrase: GIAVISTSKGVMTDRAA
type: CONSERVED_SITE
name: Ribosomal_uS8_CS
description: Small ribosomal subunit protein uS8, conserved site
Protein sequence:
MSEESVVVAFCCYEXGYGAADLAGTGRAQYPSSVRIVRVPCTGRVGIEHILTALAKGAWTVFVAGXKKGECSYEDGNLKCERRVQAAKKLLEELGIEPERVEIYFMSSAEADKFVAAVKEMHERAKELGPLA

Annotated regions:
phrase: VVAFCCYEXGYGAADLAGTGRAQYPSSVRIVRVPCTGRVGIEHILTALAKGAWTVFVAGXKKGECSYEDGNLKCERRVQAAKKLLEELGIEPERVEIYFMSSAEADKFVAAVKEMHERAKEL
type: DOMAIN
name: MvhD/FlpD
description: F420-non-reducing hydrogenase iron-sulfur subunit D
Protein sequence:
MQSSMWSFLQKKEGGEIEDIEKKISNAQELNKLKTSPKKKREAVVKEKVEKKEKKETKPKRKSSKKNKEEEEEEEQEEQDGEEEQEEEEEYQQQDEEIEEDINGEEEMELDENEKEKNKKKKQSLKTKENKESKSSSSSKKTIENKETKKPEKQSSKQSNNLKRLKRKKMDDDEEDEEDENKTDDNDLDDMLDDDSDNEKDSISSKDKEYKEKVLKDKEKKEKEKKEKELKEKESKEKEKKEKEKKEKEEKDKKEKELKEKELKEKELKDKKEKELKEKEKELKDKEKKEKELKEKEKKEKEEKEKEKKEKKEKELKEKEEKEKKEKELKEKELKEKELKEKELKEKELTSPKKETIDISDLFKRANAEAKSSVPTSTSKNSKTNKKQKVDHKPTATTKKPSPVLEAKQSTTTTTTTTTTSTATTISSKSISSPSKKEEKEVITSKKQVEATKVEVKKEKEKEKEKEKEDDEEEEEEEEDDDEKLEDIDEEEYEEEEEEDEEGISENEEEEEKKSTQIKSKFIKKVPISKKKGNAKTIQADLKVIGKYRPIEDAQWKKGEAVPYMVLAKTFEMMESTSSRLIIIEHLANLFRSIMLLSPKDLVMTIYLSINKIGPSYQSKELGIGEHVLIKSLAESTGRSVDVIKQELTEVGDLGIIAQNSRSTQTLMGKPTPLTIQSVFKTFQQIADLSGTGGQQKKKDLIKKLLVSCKDCETLYIIRSLQGKLRIGLAERSVLMALAKSVLVTPPIDGSGQQIFDIRKQMKQEEFEERYQNVVSKVTRAYSQLPNYDLFVPHLIAVNGIDNILSTCSLKVGIPVKPMLAQPTTGISQMLDRFSDMEFTCEFKYDGERAQIHRLPDGTTHIYTRNLEDYTQKYPDIVANVTKFVGPNVKSFILDCEAVAFDAATKKILSFQVLSTRARKSVQLSQIKVPVCVFAFDLLYLNGQSLIDEPLIKRREHLVENFIASDGVFAFAKYSNISDVNDIQSYLEEAVEGNCEGLMVKTLKEKSIYEPSRRSYNWLKIKKDYMQGMTDSLDLVPIGAWYGKGKRTGTYGAYLLACYDENNEEFQTLCKIGTGFSDEQLTTFTSQLKPHLINQPRNQFRFSDSIKPDVWFSPSCVWEVLAADLSISPVHTAASGILDPNKGIALRFPRFIRIRPDKSPEDATSSDQVVDMYQNQKINSQSSKINEKDEDY

Annotated regions:
phrase: RTGTYGAYLLACYDENNEEFQTLCKIGTGFSDEQLTTFTSQLKPHLINQPRNQFRFSDSIKPDVWFSPSCVWEVLAADLSISPVHTAASGILDPNKGIALRFPRFIRIRPD
type: DOMAIN
name: DNA_ligase_ATP-dep_C
description: DNA ligase, ATP-dependent, C-terminal

phrase: EFKYDGER
type: CONSERVED_SITE
name: DNA_ligase_ATP-dep_CS
description: DNA ligase, ATP-dependent, conserved site

phrase: LSQIKVPVCVFAFDLLYLNGQSLIDEPLIKRREHLVENFIASDGVFAFAKYSNISDVNDIQSYLEEAVEGNCEGLMVKTLKEKSIYEPSRRSYNWLKIKKDYMQGMTDSLDLVPIGAWYGKGKRTGTYGAYLLACY
type: DOMAIN
name: DNA_ligase_ATP-dep_cent
description: DNA ligase, ATP-dependent, central

phrase: EGLMVKTLKEKSIYEPSRRSYNWLKI
type: CONSERVED_SITE
name: DNA_ligase_ATP-dep_CS
description: DNA ligase, ATP-dependent, conserved site

phrase: PYMVLAKTFEMMESTSSRLIIIEHLANLFRSIMLLSPKDLVMTIYLSINKIGPSYQSKELGIGEHVLIKSLAESTGRSVDVIKQELTEVGDLGIIAQNSRSTQTLMGKPTPLTIQSVFKTFQQIADLSGTGGQQKKKDLIKKLLVSCKDCETLYIIRSLQGKLRIGLAERSVLMAL
type: DOMAIN
name: DNA_ligase_ATP-dep_N
description: DNA ligase, ATP-dependent, N-terminal

phrase: PMLAQPTTGISQMLDRFSDMEFTCEFKYDGERAQIHRLPDGTTHIYTRNLEDYTQKYPDIVANVTKFVGPNVKSFILDCEAVAFDAATKKILSFQVLSTRARKSVQLSQIKVPVCVFAFDLLYLNGQSLIDEPLIKRREHLVENFIASDGVFAFAKYSNISDVNDIQSYLEEAVEGNCEGLMVKTLKEKSIYEPSRRSYNWLKI
type: DOMAIN
name: DNA_ligase_ATP-dep_cent
description: DNA ligase, ATP-dependent, central
Protein sequence:
MGGCDPMDEAARGALDLLGRIGGELGVLGVGTGRTVMRFLREASARGVEPGVAVPSSFETAVELAGLGWSVGDPRVYRGVNVYVDGADEAEPGRGYMVKGGGGALLGEKILSSRSKLNIFIVGEDRLVGRLGEKTPVPVEVEPGFVSMVLASLEELGLNPRVRTSPGKRGPVVSDWGGVIVDLLTGPLEDPRGLESMLRNVPGVRETGLFLGLADYIVVGLSSCGYRVLGPYRGRAV

Annotated regions:
Protein sequence:
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK

Annotated regions:
phrase: KTITLEVEPSDTIENVKAKI
type: DOMAIN
name: Ubiquitin_dom
description: Ubiquitin domain

phrase: DKEGIPPDQQRLIFAGKQLE
type: DOMAIN
name: Ubiquitin_dom
description: Ubiquitin domain

phrase: GRTLSDYNIQKESTLHLVLRL
type: DOMAIN
name: Ubiquitin_dom
description: Ubiquitin domain

phrase: MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG
type: DOMAIN
name: Ubiquitin-like_dom
description: Ubiquitin-like domain

phrase: MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVL
type: DOMAIN
name: Ubiquitin-like_dom
description: Ubiquitin-like domain

phrase: IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKV
type: DOMAIN
name: Ribosomal_eL40_dom
description: Large ribosomal subunit protein eL40 domain

phrase: IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL
type: DOMAIN
name: Ubiquitin-like_dom
description: Ubiquitin-like domain

phrase: IEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKK
type: DOMAIN
name: Ribosomal_eL40_dom
description: Large ribosomal subunit protein eL40 domain

phrase: KAKIQDKEGIPPDQQRLIFAGKQLE
type: CONSERVED_SITE
name: Ubiquitin_CS
description: Ubiquitin conserved site