Protein sequence:
MKRKDLEARGKAPGRDSSTPFWGREGRRKDKDKGGESPSNRQVTLKTPIQSGRRAGKRQRVGLLGRLGVGWGSFLQEDIVQALIHMALVLHALFASIDRRIRSLSRRVTALESRRTTGNPMTLAFILGFLTVLCGCVVIDMQVSTTRGTEIFEGETNRTDYLHLLKLPADGCWSGILVTKKCPKVTDLAKDLESTDCGSTWTEFTLRYRRCVVKKREKRSREPPKADLLAEMEIIAFKTIRENKTIFIVALLCVAIAKRWPTWVVILLAIGTWTTVKGEFVEPLYTLKAEQMTMLQTIVRPEEGYVVATPNGLLEFKTGPAEIYGGQWLRELLADCHVNASYSTDVCPGGSQLNMADIMAKERVCSTQPYNRGWGTGCFKWGIGFVGTCVELHCDRGFNVSSIARSAIVMNVTASFHSVSDTQQMVGDIPLTFRFAKLGNAAMTCRLESEQLLLDYYHVTGSSHEGLFLRSQVDSWPGVHSTASGRHGMEKVVVWGDARSNEILVKNVIEPSLSWEDAIATHGGFRDISFVCQIMLDKLVSGAFRDCPGPKISTFSQDGFGYSGVVITTLTASSNETCSLSLTCHGCLLQSTKMIFLAGKTTSRAFVKCGNHTSTLLVGSTSVSIECALNPISQGWRLARHVVDRYRRFGVSGVAGVWQDLVGKFSVGAFFSNTALLVILVLAALIDKRIAFLLVLGGYFYYVRADLGCGIDTTRKTISCGSGVFVWKHLGVGISNDHAVELEDYSFTDLYIKDMFSWTTKPCLICEDALQCVALRRAAFSAVGSMGSERVYVNDTLARTFKFSETAKRTISVTINLIQYKFSSYVAHGRAEGDLGLLPTMYGSYPEKEADKVIRIVASRPDIRRLCGKAVSFQFKFTGFRRGLYGSNVQVEVSKNSSTECPTYLAGVAVKNGRTVITDGMFWMESIVLDGVAQITSLEMRQSHRCVWPREYTPDTLSDPSDQALFIPPAWGGPISRVNHIIGYKTQTDFPWNVSDITLIEGPAPGTKVKVDSRCHGRMHAQVIGPNDTESWCCQSCTRIVHFRVGDLLYYPMEIQLGTMSEASEPNSKIFEEPIGEEPEPTVDDILKRYGKANAQSDFRRVSQRAGVWFDRSLLNLLCLAISLQLIGAKTRTSTLTRLFLTILAMALFGLPNLFSSVGLSAWVLLVASSSAQPQDLSMNLWIVLQTGSSAVLLLGYMIRRKLAMVLGVHHLVTLMCVQFLFSAVDRYQKYLYGLLELMASVVLLSAYKSVLQALPPEVLCFSLVMGWKTALSLATVVFLIFSLNAMYKYACQYHNPRNGYRDSGANLWFWTVSLASAGGIWAAEKAHQPTVAAVLAFTMVVLFLYMEQTNVSMELEFISAGETPEGVSTENDDGINIPDLKGRYGEDGIVVGAASSSGYLPELVFVFLLGFAVTSTSYFLGALYLLIATSTNLPVVIIRMLRMKLTASNRSDDLLGLGGPVETDLQTSFQDIPNGVYRIVVRSLFGDRQRGAGFSKNGVFHTLMHVTRGEPVKWRGRVVVPHSGSALRDVVSYGGPWQLDTPTTTEDLVLMACKPDKTIEYHRYRPGVMSIDGEPVMFISDDFGKGSSGSPFFINGEPVGFYGFGFYVNGIYRSTVAGGKPTDVTESLNCDSTRRFVTWHPGKGKTRKVIVEETKKNYDSNQRTVILTPTRVVMAEVVEALNNSGMRSDKNLSYCTRNLITVACHATFTKFVLSHGAKKVRVAMIIMDECHFMDPMSIAARGILEHLHGQGTKLIYLSATPPGHAPDTGSNYAISDQSISFPTWLSPAWIGNVQKSVGAKKTILFVPSHNQANTLASAIPGSVPLHRANFSSNYAQAGDAATALVISTDISEMGANLGVDLVIDTRRALRPLVDSATRVKLVETNITTSSMIQRRGRTGRREPGTYVYPIDSQTEENPVSWVCWPEAQMILDQLGMTFMLEEAAYSQPPGRFTLVGEDRMRFLKLMDRDDIPIWLAWHWAEAGDRRHSALFQGAGTGKIIENRFGKQEYRPQYVDDRFESIEWETRKVSIDFYMNCRGGPTLYEFFTVVDWTDIWRRTASALWDLSDVMNGEVRDRYTTERSLTVVMAFVLGVSIMLSCFIAVWALCFLFSLFRPKKATYEQMPSSDPLSGGVLVSTPSVLYCMGVPLGFCVVITLAMFLVYPVLYKSIGNRSYMDSDLVKWVILGSCLICGVLAWEMRMFPNIRSDLMELVKAVKEPEEVVNSGPSFPSWEIAQGKGATMLDSLQVFFFITVLSTKFLYWFQENWTARMYAMKHPEMVSSIGGFRFDEIPFRAVLPSGFAIVAIASLPSVVVGLLAAGVFMAIMYCQNKWNATPKILTALDARDQRHDRPTEITSRVPLENTRSIMYAFCLIFSLFWAFCTRSPGDFLRGSLVVGASMWQILHPRSKIHDVMDFGSMVSAIGLLEMNYLFYRFMHIAARALGAVAPFNQFRALEKSTTIGLGMKWKMTLNALDGDAFTRYKSRGVNETERGDYVSRGGLKLNEIISKYEWRPSGRVVDLGCGRGGWSQRAVMEETVSSALGFTIGGAEKENPQRFVTKGYNLATLKTGVDVHRLTPFRCDTIMCDIGESDPSPIKEKTRTLKVLQLLENWLLVNPGAHFVCKILSPYSLEVLRKIESLQHLYNGRLVRLSHSRNSSVEMYYISGARSNVVRTTYMTLAALMARFSRHLDSVVLPSPVLPKGTRADPAASVASMNTSDMMDRVERLMNENRGTWFEDQQHPYKSFKYFGSFVTDDVKVGGQAVNPLVRKIMWPWETLTSVVGFSMTDVSTYSQQKVLREKVDTVIPPHPQHIRRVNRTITKHFIRLFKNRNLRPRILSKEEFVANVRNDAAVGSWSRDVPWRDVQEAIQDQCFWDLVGKERALHLQGKCEMCIYNTMGKKEKKPSLAGEAKGSRTIWYMWLGSRFLEFEALGFLNADHWVSREHFPGGVGGVGVNYFGYYLKDIASRGKYLIADDIAGWDTKISEEDLEDEEALLTALTEDPYHRALMAATMRLAYQNIVAMFPRTHSKYGSGTVMDVVGRRDQRGSGQVVTYALNTITNGKVQVARVLESEGLLQADESVLDAWLEKHLEEALGNMVIAGDDVVVSTDNRDFSSALEYLELTGKTRKNVPQGAPSRMESNWEKVEFCSHHYHEMSLKDGRIIIAPCRHENEVLGRSRLQKGGVVSISESACMAKAYAQMWALYYFHRRDLRLGFIAISSAVPTNWFPLGRTSWSVHQYHEWMTTDDMLRVWNDVWVHNNPWMLNKESIESWDDIPYLHKKQDITCGSLIGVKERATWAREIENSVISVRRIIDAETGVLNTYKDELSVMSRYRRGNDVI

Annotated regions:
phrase: ESLNCDSTRRFVTWHPGKGKTRKVIVEETKKNYDSNQRTVILTPTRVVMAEVVEALNNSGMRSDKNLSYCTRNLITVACHATFTKFVLSHGAKKVRVAMIIMDECHFMDPMSIAARGILEHLHGQGTKLIYLSATPPGHAPDTGSNYAISDQS
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: YVSRGGLKLNEIISKYEWRPSGRVVDLGCGRGGWSQRAVMEETVSSALGFTIGGAEKENPQRFVTKGYNLATLKTGVDVHRLTPFRCDTIMCDIGESDPSPIKEKTRTLKVLQLLENWLLVNPGAHFVCKILSPYSLEVLRKIESLQHLYNGRLVRLSHSRNSSVEMYYIS
type: DOMAIN
name: RNA_MeTrfase_FtsJ_dom
description: Ribosomal RNA methyltransferase, FtsJ domain

phrase: SDDLLGLGGPVETDLQTSFQDIPNGVYRIVVRSLFGDRQRGAGFSKNGVFHTLMHVTRGEPVKWRGRVVVPHSGSALRDVVSYGGPWQLDTPTTTEDLVLMACKPDKTIEYHRYRPGVMSIDGEPVMFISDDFGKGSSGSPFFINGEPVGFYGFGFYVNGIYRSTVAGGKPTDVTESL
type: DOMAIN
name: Flavi_NS3_S7
description: Non-structural protein NS3, peptidase S7, flavivirus

phrase: NGVYRIVVRSLFGDRQRGAGFSKNGVFHTLMHVTRGEPVKWRGRVVVPHSGSALRDVVSYGGPWQLDTPTTTEDLVLMACKPDKTIEYHRYRPGVMSIDGEPVMFISDDFGKGSSGSPFFINGEPVGFYGFGFYV
type: DOMAIN
name: Flavi_NS3_S7
description: Non-structural protein NS3, peptidase S7, flavivirus

phrase: DSTRRFVTWHPGKGKTRKVIVEETKKNYDSNQRTVILTPTRVVMAEVVEALNNSGMRSDKNLSYCTRNLITVACHATFTKFVLSHGAKKVRVAMIIMDECHFMDPMSIAARGILEHLHGQGTKLIYLSATPPGHAPDTGS
type: DOMAIN
name: Flavi_DEAD
description: Non-structural protein NS3-like, DEAD box helicase, flavivirus

phrase: LPKGTRADPAASVASMNTSDMMDRVERLMNENRGTWFEDQQHPYKSFKYFGSFVTDDVKVGGQAVNPLVRKIMWPWETLTSVVGFSMTDVSTYSQQKVLREKVDTVIPPHPQHIRRVNRTITKHFIRLFKNRNLRPRILSKEEFVANVRNDAAVGSWSRDVPWRDVQEAIQDQCFWDLVGKERALHLQGKCEMCIYNTMGKKEKKPSLAGEAKGSRTIWYMWLGSRFLEFEALGFLNADHWVSREHFPGGVGGVGVNYFGYYLKDIASRGKYLIADDIAGWDTKISEEDLEDEEALLTALTEDPYHRALMAATMRLAYQNIVAMFPRTHSKYGSGTVMDVVGRRDQRGSGQVVTYALNTITNGKVQVARVLESEGLLQADESVLDAWLEKHLEEALGNMVIAGDDVVVSTDNRDFSSALEYLELTGKTRKNVPQGAPS
type: DOMAIN
name: Flavi_RdRp_fingers/palm
description: RNA-directed RNA polymerase, fingers/palm subdomains, flavivirus

phrase: QTEENPVSWVCWPEAQMILDQLGMTFMLEEAAYSQPPGRFTLVGEDRMRFLKLMDRDDIPIWLAWHWAEAGDRRHSALFQGAGTGKIIENRFGKQEYRPQYVDDRFESIEWETRK
type: DOMAIN
name: NS3-hel_C_flaviviridae
description: Flavivridae NS3 helicase, C-terminal helical domain

phrase: EKVEFCSHHYHEMSLKDGRIIIAPCRHENEVLGRSRLQKGGVVSISESACMAKAYAQMWALYYFHRRDLRLGFIAISSAVPTNWFPLGRTSWSVHQYHEWMTTDDMLRVWNDVWVHNNPWMLNKESIESWDDIPYLHKKQDITCGSLIGVKERATWAREIENS
type: DOMAIN
name: Flavi_NS5_thumb
description: RNA-directed RNA polymerase, thumb subdomain, flavivirus

phrase: ALEKSTTIGLGMKWKMTLNALDGDAFTRYKSRGVNETERGDYVSRGGLKLNEIISKYEWRPSGRVVDLGCGRGGWSQRAVMEETVSSALGFTIGGAEKENPQRFVTKGYNLATLKTGVDVHRLTPFRCDTIMCDIGESDPSPIKEKTRTLKVLQLLENWLLVNPGAHFVCKILSPYSLEVLRKIESLQHLYNGRLVRLSHSRNSSVEMYYISGARSNVVRTTYMTLAALMARFSRHLDSVVLPSPVLPKGTR
type: DOMAIN
name: mRNA_cap_0/1_MeTrfase
description: mRNA cap 0/1 methyltransferase

phrase: LGMKWKMTLNALDGDAFTRYKSRGVNETERGDYVSRGGLKLNEIISKYEWRPSGRVVDLGCGRGGWSQRAVMEETVSSALGFTIGGAEKENPQRFVTKGYNLATLKTGVDVHRLTPFRCDTIMCDIGESDPSPIKEKTRTLKVLQLLENWLLVNPGAHFVCKILSPYSLEVLRKIESLQHLYNGRLVRLSHSRNSSVEMYYISGARSNVVRTTYMTLAALMA
type: DOMAIN
name: mRNA_cap_0/1_MeTrfase
description: mRNA cap 0/1 methyltransferase

phrase: AGGKPTDVTESLNCDSTRRFVTWHPGKGKTRKVIVEETKKNYDSNQRTVILTPTRVVMAEVVEALNNSGMRSDKNLSYCTRNLITVACHATFTKFVLSHGAKKVRVAMIIMDECHFMDPMSIAARGILEHLHGQGTKLIYLSATPPGHAPDTGSNYAISDQSISFPTWLSPAWIGN
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: KYLIADDIAGWDTKISEEDLEDEEALLTALTEDPYHRALMAATMRLAYQNIVAMFPRTHSKYGSGTVMDVVGRRDQRGSGQVVTYALNTITNGKVQVARVLESEGLLQADESVLDAWLEKHLEEALGNMVIAGDDVVVSTDNRDFSS
type: DOMAIN
name: RNA-dir_pol_PSvirus
description: RNA-directed RNA polymerase, catalytic domain

phrase: QFKFTGFRRGLYGSNVQVEVSKNSSTECPTYLAGVAVKNGRTVITDGMFWMESIVLDGVAQITSLEMRQSHRCVWPREYTPDTLSDPSDQALFIPPAWGGPISRVNHIIGYKTQTDFPWNVSDITLIEGPAPGTKVKVDSRCHGRMHAQVIGPNDTESWCCQSCTRIVHFRVGDLLYYPMEIQ
type: DOMAIN
name: Flavi_NS1
description: Non-structural protein NS1, flavivirus