nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MAPTQEAETRLRWETEQQQSLEHNPLADSPTTADFTSGKAARALKAGAGSAAGAVRGPVAMSTRPALRAPLAGRQFPPLXXXXXXXXWRGRTPSALAGCCRAGTFPIGRALRGAAAAGALIGGRARRGPXXXXXXXSGLDPRVCLCPSLLCHPFLPAQVTQILGDSSPYTLVAKKIDLPEYQGEPDEISVQKCREAARQVQGPVIVEDTCLCFNALGGLPGPYIKWFLEKLKPEGLYKLLAGFEDKSAYALCTFAFSSGNPEEPVRLFKGQTHGVIVEPRGPRDFGWDPCFQPNGYNQTYAEMPKVVKNSISHRYRALSELSAFFLQSDSSEPRPAPS

Annotated regions:
Protein sequence:
MKKALVIKFFMGNYLISDIETKDKITAQVKGKLKNYDTHKKELFIIKVGDIVIYENYLDRYLISEVLERHNELNRPNIANFNQVILVFSLYKPRFQFRLLDKFLLILNKYKLKIILIFTKIDLITKKKFLIIQKKISYYENFYRIYYVNSKNKNSTHHLMDIFSNKITVLAGQTGVGKSTFLNSLKPSLQLKTQEISKKLGLGKHTTKNAQLYEFNGGYIADTPGFSKLDLTIFDYEELKFFYPDFLLYSDKCYFKKDCSHIKEINCGVKKALKLSLIPDWRYDNYLKFIEKIQEQKKLNYNKK

Annotated regions:
phrase: VLERHNELNRPNIANFNQVILVFSLYKPRFQFRLLDKFLLILNKYKLKIILIFTKIDLITKKKFLIIQKKISYYENFYRIYYVNSKNKNSTHHLMDIFSNKITVLAGQTGVGKSTFLNSLKPSLQLKTQEISKKLGLGKHTTKNAQLYEFNGGYIADTPGFSKLD
type: DOMAIN
name: RsgA_GTPase_dom
description: RsgA GTPase domain

phrase: HNELNRPNIANFNQVILVFSLYKPRFQFRLLDKFLLILNKYKLKIILIFTKIDLITKKKFLIIQKKISYYENFYRIYYVNSKNKNSTHHLMDIFSNKITVLAGQTGVGKSTFLNSLKPSLQLKTQEISKKLGLGKHTTKNAQLYEFNGGYIADTPGFSK
type: DOMAIN
name: G_CP_dom
description: Circularly permuted (CP)-type guanine nucleotide-binding (G) domain

phrase: ANFNQVILVFSLYKPRFQFRLLDKFLLILNKYKLKIILIFTKIDLITKKKFLIIQKKISYYENFYRIYYVNSKNKNSTHHLMDIFSNKITVLAGQTGVGKSTFLNSLKPSLQLKTQEISKKLGLGKHTTKNAQLYEFNGGYIADTPGF
type: DOMAIN
name: RsgA_GTPase_dom
description: RsgA GTPase domain
Protein sequence:
MTNSEPRRMTCDSEVVWKKLQDGLDVAYRRENMAPKDYMTLYTSVYDYCTSITLSTSRRDGEDGRAESSTPARTAGADFVGHEMYQRVEEYVKAYVIAVCEKGAELSGEDLLKYYTTEWENFRISSKVMDGIFAYLNRHWIRRELDEGHENIYMVYTLALVVWKRNLFNDLKDKVIDAMLELIRSERTGSMINSRYISGVVECLVELGVDDSETDAKKDAETKKLAVYKEFFEVKFLEATRGFYTQEAANFLSNGGNVTDYMIKVETRLNQEDDRCQLYLNSSTKTPLATCCESVLISNQLDFLQRHFGGLLVDKRDDDLSRMFKLCDRVPNGLDELRKSLENHIAKEGHQALERVAMEAATDAKLYVKTLLEVHERYQSLVNRSFKNEPGFMQSLDKAATSFINNNAVTKRAPPQAQLTKSAELLARYCDQLLRKSSKMPDEAELEELQTKIMVVFKYIDDKDVFSKFYTKMFSKRLISELSASDEAEANFITKLKSMCGYEYTARLSKMVNDTQVSKDLTADFKEKKADMLGQKSVEFNVLVLSSGSWPTFPTTPITLPQQLSKTIEIFGQFYNEKFNGRRLTWVYSQSRGEITSTAFPKKYVFTATTAQMCTMLLFNEQDSYTVEQIAAATKMDEKSAPAIVGSLIKNLVLKADTELQKEDEVPMTATVSLNKAYMNKKVRVDLSKFTMKQDAVRDTENVQKNVEEDRKSVISACIVRIMKTRKRVQHQQLMTEVITQLSGRFKPKVEMIKRCIGSLIEKEYMLRTEGQKDLYEYLA

Annotated regions:
phrase: TKIMVVFKYIDDKDVFSKFYTKMFSKRLISELSASDEAEANFITKLKSMCGYEYTARLSKMVNDTQVSKDLTADFKEKKADMLGQKSVEFNVLVLSSGSWPTFPTTPITLPQQLSKTIEIFGQFYNEKFNGRRLTWVYSQSRGEITST
type: DOMAIN
name: Cullin_homology
description: Cullin homology domain

phrase: VEEDRKSVISACIVRIMKTRKRVQHQQLMTEVITQLSGRFKPKVEMIKRCIGSLIEKEYMLRTEGQK
type: DOMAIN
name: Cullin_neddylation_domain
description: Cullin protein, neddylation domain

phrase: WKKLQDGLDVAYRRENMAPKDYMTLYTSVYDYCTSITLSTSRRDGEDGRAESSTPARTAGADFVGHEMYQRVEEYVKAYVIAVCEKGAELSGEDLLKYYTTEWENFRISSKVMDGIFAYLNRHWIRRELDEGHENIYMVYTLALVVWKRNLFNDLKDKVIDAMLELIRSERTGSMINSRYISGVVECLVELGVDDSETDAKKDAETKKLAVYKEFFEVKFLEATRGFYTQEAANFLSNGGNVTDYMIKVETRLNQEDDRCQLYLNSSTKTPLATCCESVLISNQLDFLQRHFGGLLVDKRDDDLSRMFKLCDRVPNGLDELRKSLENHIAKEGHQALERVAMEAATDAKLYVKTLLEVHERYQSLVNRSFKNEPGFMQSLDKAATSFINNNAVTKRAPPQAQLTKSAELLARYCDQLLRKSSKMPDEAELEELQTKIMVVFKYIDDKDVFSKFYTKMFSKRLISELSASDEAEANFITKLKSMCGYEYTARLSKMVNDTQVSKDLTADFKEKKADMLGQKSVEFNVLVLSSGSWPTFPTTPITLPQQLSKTIEIFGQFYNEKFNGRRLTWVYSQSRGEITSTAFPKKYVFTATTAQMCTMLLFNEQDSYTVEQIAAATKMDEKSAPAIVGSLIKNLVLKADTELQKEDEVPMTATVSLNKA
type: DOMAIN
name: Cullin_N
description: Cullin, N-terminal

phrase: IKRCIGSLIEKEYMLRTEGQKDLYEYL
type: CONSERVED_SITE
name: Cullin_CS
description: Cullin, conserved site

phrase: KSAELLARYCDQLLRKSSKMPDEAELEELQTKIMVVFKYIDDKDVFSKFYTKMFSKRLISELSASDEAEANFITKLKSMCGYEYTARLSKMVNDTQVSKDLTADFKEKKADMLGQKSVEFNVLVLSSGSWPTFPTTPITLPQQLSKTIEIFGQFYNEKFNGRRLTWVYSQSRGEITSTAFPKKYVFTATTAQMCTMLLFNEQDSYTVEQIAAATKMDEKSAPAIVGSL
type: DOMAIN
name: Cullin_homology
description: Cullin homology domain

phrase: DRKSVISACIVRIMKTRKRVQHQQLMTEVITQLSGRFKPKVEMIKRCIGSLIEKEYMLRTE
type: DOMAIN
name: Cullin_neddylation_domain
description: Cullin protein, neddylation domain
Protein sequence:
MSPFLSFSRATWSELRNSVPMTLSEEDLKALQGINENLTMQEAVEVYLPLSRLLNLYVQARQSRNSVLHQFLNNDEHAPPFVIGIAGSVAVGKSTTARVLCALLSRWENHPKVELVTTDGFLYPKKELDQRGIMHKKGFPESYDMKKLVQFVSDVKAGKPELEVPVYSHITYDITEEVKKVDRPDVLIIEGLNVLQSGMDYPHDPHRVFVSDFLDFSIYVDAESNTIEQWYVERFLKFRKGAFTQPGSYFSHYTQLSEQQAIEKAQQIWRDINGINLTENILPTKERAQLILRKGPNHLVEEILLRK

Annotated regions:
phrase: VIGIAGSVAVGKSTTARVLCALLSRWENHPKVELVTTDGFLYPKKELDQRGIMHKKGFPESYDMKKLVQFVSDVKAGKPELEVPVYSHITYDITEEVKKVDRPDVLIIEGLNVLQSGMDYPHDPHRVFVSDFLDFSIYVDAESNTIEQWYV
type: DOMAIN
name: PRK/URK
description: Phosphoribulokinase/uridine kinase
Protein sequence:
MESPWNELTLAFSRTSMFPFFDIAHYLVSVMALKHQPGAAALAWKNPLSSWFTAMLHCFGGGILSCVLLAEPPLRFLANNTNILLASSIWYIAFFCPCDLISQAYSFLPVQLLAAGMKEVTRTWKIVGGVTHANSYYKNGWIVMIAVGWARGAGGSIITNFEQLVKGCWKPEAEEWLKMSYPAKVTLLGSVIFTFQQTKYLAISKHNLMFLFTVFLVATKITMMITKTALVPFACFEDTLSRMLFGWQQQFSPCEKKSETKSSFNGTGSSTSKPVANASDKVKKKHSKKTE

Annotated regions:
Protein sequence:
MALKIRLARGGAKKRPFYRVVIADTRSPRDGRFIEKIGTFNPLLPKDNAERIKVDIERAKHWLSVGALPTDRVARFLDDAGVYTRKARSNPEKSKPKAKAQERLEAARMAEEEAAAAAKAAAEAPAEEAPAAEAPAEEAQA

Annotated regions:
phrase: LKIRLARGG
type: CONSERVED_SITE
name: Ribosomal_bS16_CS
description: Small ribosomal subunit protein bS16, conserved site
Protein sequence:
MATIDVFDINKNKVGEMDLSDAVFNGDVREYLIHEAVKVQLANRRAGTVGVKNRAAVSGGGKKPFKQKGTGQARQGCIRAPHYVGGGVAFGPQAKTYALSMNKKARKAAVRSALSMLFKENKLSVLDCLSLPSISTKGFVGVLKTFDVTKTLVIIDEANTNLELSARNVKDVKVLKAEHLNVFDIVKFNNIILTQSAVRKIEGALQS

Annotated regions:
Protein sequence:
MIRLILWNNVQSLVFKRCLFVPSNSLTNKRKRRIPPSKPRSSNRKDGDIEPYRMTDQNQTPNTGSIARLPAEVKKELKDLRSFTKVIAQHLKPEQENDSLTSAEKPDTSQLPPIDIEEATDDIFGEISGTKKLSANAVPPPPPPPPPGLDIPDEIKERLGLLSELLVPAKTSNNKLPEKQVENNWKLLLSQLDQAGGLSGLSKRSVSKFFSKIPPKNLKNLIPMIENMYNKAEMSIPHPIYYMFVRSLTLGDKISDSQMQLINKYFQEISKQTDLKIDHYETMILAYVKNNHMEKIDGILAQMKKKNIEISKMIYTSIVRGYIFYQKDHQRALDTFDSMKFLSQKTQPDEKVYTDVIVSCVMHREIERALDLYYELKDKGMNVNQNLLSTLAKGCSRSKQFKTQAWNFLFQVYDHGWVPNLQTYEHMLYIAARDGDVELTRVLFYKMLQTNSVTIRAFRYLILSYSKYVPPHKRKEKHLILLNHKGQLFRQNILQDVDFSKPVHGFPFLPSSHIPDSKFVLAESSAIWAHTVMNNPSFLRQQTLVASYVSIALELGDFTEFKDRFDSASYLNTDGIPKVREIEIIEPRQDEPTEKATTTEEQITSSEPDTNSLIRSPILNQLQQNINDNQFKAPRDSYLYNLAIKAAGKFKDYSFAQQILHERGQFRKSNSFKLLSPKQQNQDDFQFAGYLVECWTNMNLLEDAYAVVLSSVDRFPWSWRELGVLNNAAMKLGSLELAEAVRKVAQVTQVKHHGKIKRQDFKTYVMKRGY

Annotated regions:
phrase: DEKVYTDVIVSCVMHREIERALDLYYELKDKGMN
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: YETMILAYVKNNHMEKIDGILAQMKKKN
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: VYTDVIVSCVMHREIERALDLYYELKDK
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat
Protein sequence:
MRYIEFDEKRKFDIVPVGRVAIDFNPTDIHKPLSESRNFNKYLGGSPANIAVGLARLGKKVGFIGKVSDDRFGEFVVNYFKKEGIDVSEISKAKNGESLGLTFTEILSPTESSILMYRNGIADLQLDVDDIDEDYIKNTKAIVISGTALAMSPSREAALKALRLAKKNGTVVIFDVDYREYNWKNKDEIAIYYSIVGKESDIIMGSREEFDLMEGLIAKDSTDEETAKRWLDYGNKIVVIKHGKDGSTAYTRDGKAYRIKPFPVKLLKSFGGGDAYASAFIYGILEGWDMMDALEFGSASAAMLVASHSCSEDMPTVEAIKEFIKKEKEEYGEMVARS

Annotated regions:
phrase: DIVPVGRVAIDFNPTDIHKPLSESRNFNKYLGGSPANIAVGLARLGKKVGFIGKVSDDRFGEFVVNYFKKEGIDVSEISKAKNGESLGLTFTEILSPTESSILMYRNGIADLQLDVDDIDEDYIKNTKAIVISGTALAMSPSREAALKALRLAKKNGTVVIFDVDYREYNWKNKDEIAIYYSIVGKESDIIMGSREEFDLMEGLIAKDSTDEETAKRWLDYGNKIVVIKHGKDGSTAYTRDGKAYRIKPFPVKLLKSFGGGDAYASAFIYGILEGWDMMDALEFGSASAAMLVASHSCSEDMP
type: DOMAIN
name: PfkB_dom
description: Carbohydrate kinase PfkB

phrase: KSFGGGDAYASAF
type: CONSERVED_SITE
name: Carboh/pur_kinase_PfkB_CS
description: Carbohydrate/purine kinase, PfkB, conserved site
Protein sequence:
MDSPEVTFTLAYLVFAVCFVFTPNEFHAAGLTVQNLLSGWLGSEDAAFVPFHLRRTAATLLCHSLLPLGYYVGMCLAASEKRLHALSQAPEAWRLFLLLAVTLPSIACILIYYWSRDRWACHPLARTLALYALPQSGWQAVASSVNTEFRRIDKFATGAPGARVIVTDTWVMKVTTYRVHVAQQQDVHLTVTESRQHELSPDSNLPVQLLTIRVASTNPAVQAFDIWLNSTEYGELCEKLRAPIRRAAHVVIHQSLGDLFLETFASLVEVNPAYSVPSSQELEACIGCMQTRASVKLVKTCQEAATGECQQCYCRPMWCLTCMGKWFASRQDPLRPDTWLASRVPCPTCRARFCILDVCTVR

Annotated regions:
Protein sequence:
MQKSYDYDAIVIGSGPGGEGAAMGLVKQGARIAVIERYHNIGGGCTHWGTIPSKALRHAVSRIIEFNQNPLYSDHTRLLRSSFADILNHTENVVSQQTHMRQGFYERNHCEIFQGDARFIDANTLEIETHDGSIERLTAEKFVIACGSRPYHPPDVDFTHPRIYDSDSILNLHHEPGHVIIYGAGVIGCEYASIFRGLAVKVDLINTRDRLLAFLDQEMSDSLSYHFWNNGVVIRHNEEFEKVEGVADGVIMHLKSGKKLKADCLLYANGRTGNTDSLSLENVGLEADGRGLLKVNSMYQTAQPNIYAVGDVIGYPSLASAAYDQGRIAAQAMIKGEATAHLIEDIPTGIYTIPEISSVGKTEQQLTAMKVPYEVGRAQFKHLARAQIVGMNVGSLKILFHRETKEILGIHCFGERAAEIIHIGQAIMEQKNGGNTIEYFVNTTFNYPTMAEAYRVAALNGLNRLF

Annotated regions:
phrase: YDAIVIGSGPGGEGAAMGLVKQGARIAVIERYHNIGGGCTHWGTIPSKALRHAVSRIIEFNQNPLYSDHTRLLRSSFADILNHTENVVSQQTHMRQGFYERNHCEIFQGDARFIDANTLEIETHDGSIERLTAEKFVIACGSRPYHPPDVDFTHPRIYDSDSILNLHHEPGHVIIYGAGVIGCEYASIFRGLAVKVDLINTRDRLLAFLDQEMSDSLSYHFWNNGVVIRHNEEFEKVEGVADGVIMHLKSGKKLKADCLLYANGRTGNTDSLSLENVGLEADGRGLLKVNSMYQTAQPNIYAVGDVIGYPSLASAAYDQ
type: DOMAIN
name: FAD/NAD-binding_dom
description: FAD/NAD(P)-binding domain

phrase: IPTGIYTIPEISSVGKTEQQLTAMKVPYEVGRAQFKHLARAQIVGMNVGSLKILFHRETKEILGIHCFGERAAEIIHIGQAIMEQKNGGNTIEYFVNTTFNYPTMAEAYRV
type: DOMAIN
name: Pyr_nucl-diS_OxRdtase_dimer
description: Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
Protein sequence:
MFSIQQPLLVFSDLDGTLLDSHSYDWQPAAPWLSRLREANVPVILCSSKTSAEMLYLQKMLGLQGLPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISQVLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNELGLQFMQGARFWHVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIVKGLNREGVHLHDEDPARVWRTQREGPEGWREGLDHFFSAR

Annotated regions:
Protein sequence:
MDFSPSSELGFHFVAFILLTRHRTAFPASGKKRETDYSDGDPLDVHKRLPSSAGEDRAVMLGFAMMGFSVLMFFLLGTTILKPFMLSIQREESTCTAIHTDIMDDWLDCAFTCGVHCHGQGKYPCLQVFVNLSHPGQKALLHYNEEAVQINPKCFYTPKCHQDRNDLLNSALDIKEFFDHKNGTPFSCFYSPASQSEDVILIKKYDQMAIFHCLFWPSLTLLGGALIVGMVRLTQHLSLLCEKYSTVVRDEVGGKVPYIEQHQFKLCIMRRSKGRAEKS

Annotated regions:
Protein sequence:
MLKQFLLLQSFSFFLFNVVIVGGRTFGGGFSAEENPFTPKASLVRYWNKEIRGQSPRSEFLISKASPLNAVDSATFSKLAAANSLPTRFPDFCSAANLFCFPDLGASLEKHDDDVKFSVYDQKNFTNYGNARAGGADSFKNYSKDGNVVTDSFRRYSRNAAGHDDKFTVYGENSNVVEEGFNSYGTFGTGGAGDFTNYQNNVNNPTSRFTAYSDGGNGRSQTFKTYTHEANAGNGQSFTSYGKNGNGVPNEFTSYGVSSNVIGSGFSNYGESGNAANDTFTSYGSDGNVPQNNFNNYGASGNAAVDTFANYRDKANVGDDSFSSYAKDSNSEKVNFVNYGQSFNPGSETFTGYGKGAEGSKLSFKTYTPNSTFKDYAKKGVAFAKYNVSTTTANTVGDGKTVNKWIEPGKFFRESSLKEGTVIPMPDIKDKMPKRSFLPRSIITKLPFSTSKLGEIKRIFHAVENSTMGGIITDAVTECERPPSVGETKRCVGSAEDMIDFATSVLGRSVVLRTTENVAGSKEKVVIGKVNGINGGKLTKAVSCHQSLYPYLLYYCHSVPKVRVYEADLLELNSKKKINHGIAICHMDTSSWGPSHGAFLALGSKPGRIEVCHWIFENDMNWAIAD

Annotated regions:
phrase: GKFFRESSLKEGTVIPMPDIKDKMPKRSFLPRSIITKLPFSTSKLGEIKRIFHAVENSTMGGIITDAVTECERPPSVGETKRCVGSAEDMIDFATSVLGRSVVLRTTENVAGSKEKVVIGKVNGINGGKLTKAVSCHQSLYPYLLYYCHSVPKVRVYEADLLELNSKKKINHGIAICHMDTSSWGPSHGAFLALGSKPGRIEVCHWIFENDMNWAI
type: DOMAIN
name: BURP_dom
description: BURP domain

phrase: FFRESSLKEGTVIPMPDIKDKMPKRSFLPRSIITKLPFSTSKLGEIKRIFHAVENSTMGGIITDAVTECERPPSVGETKRCVGSAEDMIDFATSVLGRSVVLRTTENVAGSKEKVVIGKVNGINGGKLTKAVSCHQSLYPYLLYYCHSVPKVRVYEADLLELNSKKKINHGIAICHMDTSSWGPSHGAFLALGSKPGRIEVCHWIFENDMNW
type: DOMAIN
name: BURP_dom
description: BURP domain

phrase: FFRESSLKEGTVIPMPDIKDKMPKRSFLPRSIITKLPFSTSKLGEIKRIFHAVENSTMGGIITDAVTECERPPSVGETKRCVGSAEDMIDFATSVLGRSVVLRTTENVAGSKEKVVIGKVNGINGGKLTKAVSCHQSLYPYLLYYCHSVPKVRVYEADLLELNSKKKINHGIAICHMDTSSWGPSHGAFLALGSKPGRIEVCHWIFENDMNWAI
type: DOMAIN
name: BURP_dom
description: BURP domain
Protein sequence:
MNTAIITGAAQGVGLCIAEALAQRNYRIVLSDIDTEKGPAAASKLNLTHGEGTAAFFHCDLSNLREIDALLSFTIETMGGFSVLINNAGYLRAPFLALSAQDIQDMITVNLTAPIYATQQAIKYWDGLHQGQAGCVVSVTSSSSFKTYASIAPYGAAKAGAAMFTFAAGAFHPRVRVNAVAPTAIATGFDKNRMRVETDRTGPGYTPEEEMRAMGLKRLQPQEVAEAVVRCVEDKGLYGKVLYLDAVEGIKIHDGYT

Annotated regions:
phrase: SSSSFKTYASIAPYGAAKAGAAMFTFAA
type: CONSERVED_SITE
name: Sc_DH/Rdtase_CS
description: Short-chain dehydrogenase/reductase, conserved site
Protein sequence:
MARLIDQFERLPGIGPRTAQRLALHLLNQPQEQIHQFADALLAARTQVGQCQTCFHLSADPECEICRNPERRNGVICVVADSRDLLALERTREFHGRYHVLGGLISPMDGIGPELLRVTELVQRISNEEISEVILALTPSVEGDTTSLYLGRLLKPFCSVSRIAYGLPMGSELEYADEVTLSRALEGRRPV

Annotated regions:
phrase: GVICVVADSRDLLALERTREFHGRYHVLGGLISPMDGIGPELLRVTELVQRISNEEISEVILALTPSVEGDTTSLYLGRLLKPFC
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: GVICVVADSRDLLALERTREFHGRYHVLGGLISPMDGIGPELLRVTELVQRISNEEISEVILALTPSVEGDTTSLYLGRLLKPFCSVSRIAYGL
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: GVICVVADSRDLLALERTREFHGRYHVLGGLISPMDGIGPELLRVTELVQRISNEEISEVILALTPSVEGDTTSLYLGRLLKPFCSVSRIAYGLPMGSELEYADEVTLSR
type: DOMAIN
name: TOPRIM_RecR
description: RecR, TOPRIM domain

phrase: VGQCQTCFHLSADPECEICR
type: DOMAIN
name: Rcmb_RecR_Znf
description: Recombination protein RecR, zinc finger domain

phrase: VICVVADSRDLLALERTREFHGRYHVLGGLISPMDGIGPELLRVTELVQRISNEEISEVILALTPSVEGDTTSLYLGRLLKPFCSVSRI
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain
Protein sequence:
MKLILIKPVKKLGKIMDIVDVANGFGRNYLLPRNYAIRATNANLEIVKSTVQQLNEKNQKGIDAAQAVMQKIDRSFITFICQTSDDGKLFGSITAKEIIKKLQISSDIKAYIDIKPIKTAGIHEVEVSLHAEVHCKIFINVARSNTEAQEYLKKFNAALQNTNNNVLVEKN

Annotated regions:
phrase: AAQAVMQKIDRSFITFICQTSDDGKLFGSITAKEIIKKLQISSDIKAYIDIKPIKTAGIHEVEVSLHAEVHCKIFINV
type: DOMAIN
name: Ribosomal_bL9_C
description: Large ribosomal subunit protein bL9, C-terminal

phrase: MKLILIKPVKKLGKIMDIVDVANGFGRNYLLPRNYAIRATNANLE
type: DOMAIN
name: Ribosomal_bL9_N
description: Large ribosomal subunit protein bL9, N-terminal
Protein sequence:
MTTSLQPVHALVPGANLEAYVHSVNSIPLLSPEQERELAERLFYQQDLEAARQMVLAHLRFVVHIAKSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILRNWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNEEVHRVAESLGVEPREVREMESRLTGQDMAFDPAADADDESAYQSPAHYLEDHRYDPARQLEDADWSDSSSANLHEALEGLDERSRDILQQRWLSEEKATLHDLAEKYNVSAERIRQLEKNAMSKLKGRILA

Annotated regions:
phrase: ALEGLDERSRDILQQRWLSEEKATLHDLAEKYNVSAERIRQLEKNAMSKL
type: DOMAIN
name: RNA_pol_sigma70_r4
description: RNA polymerase sigma-70 region 4

phrase: TLHDLAEKYNVSAERIRQLEKNAMSK
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: DLIQEGNVGLMKA
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: EAARQMVLAHLRFVVHIAKSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILRNWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNEEVHRVAESLGVEPREVREMESRLTGQDMAFDPAADADDESAYQSPAHYLEDHRYDPARQLEDADWSDSSSANLHEALEGLDERSRDILQQRWLSEEKATLHDLAEKYNVSAERIRQLEKNAMSKLK
type: DOMAIN
name: RNA_pol_sigma-70_dom
description: RNA polymerase sigma-70-like domain

phrase: LEAYVHSVNSIPLLSPEQERELAE
type: DOMAIN
name: RNA_pol_sigma70_r1_2
description: RNA polymerase sigma-70 region 1.2

phrase: DLIQEGNVGLMKA
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: LDERSRDILQQR
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: TLHDLAEKYNVSAER
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: IRQLEKNAMSK
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: MVLAHLRFVVHIAKSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILRNW
type: DOMAIN
name: RNA_pol_sigma70_r2
description: RNA polymerase sigma-70 region 2
Protein sequence:
MADTRPERRFTRIDRLPPYVFNITAELKMAARRRGEDIIDFSMGNPDGATPPHIVEKLCTVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVEIDPESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGARDVAVEFFTLSKSYNMAGWRIGFMVGNKTLVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMPKASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAIRGIKAMFRADGLLPASSKHIHENAE

Annotated regions:
phrase: DIIDFSMGNPDGATPPHIVEKLCTVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVEIDPESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGARDVAVEFFTLSKSYNMAGWRIGFMVGNKTLVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEAGWMVEMPKASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFA
type: DOMAIN
name: Aminotransferase_I/II_large
description: Aminotransferase, class I/classII, large domain
Protein sequence:
MGMFNWLASAGMTGFPQLAEAGGYSLNFDILEANLVNLVIVIGLLIYFGRGFLGESLVKRREAIETAISEAEANQEKAAATLAEEQEKLAQAQAEAKKILANAQTNASKAKEQILAEAKTEIQRIKDAGSQDTSASQERAIAEIRQRVTAMALEKVEADLKNQLGNNESAQRKLVDQSIALLGGNS

Annotated regions:
Protein sequence:
MKQLLDFLPLVIFFAVYKLFDIYAASGALIAATALQLIVTYLLYKKIEKMHLITFVMVTVFGTLTLVFHDDAFIKWKVTVVYALFAIALAVSQLINKPILKSMLGKELVVEDRIWAHVTWYWVSFFITCALVNIYVAFSLPQEVWVNFKVFGLTALTLVNTVITVIYLYKNMPEEHKKELNNK

Annotated regions:
Protein sequence:
MKPKYIFCTGGVVSSVGKGLTVAAIGRILKARGLRVAIQKLDPYLNVDPGTMSPYQHGEVFVTSDGAEADLDLGHYERFVDENVSRLSNVTAGQVYLTVIEKERKGDYLGGTIQVVPHITNEIKRCIKLLGQRADADVVIVEVGGTAGDIESLPFLEALRQLRTEFSRRDTMYVHVTFLPHIGATDELKTKPTQHSVRELRGIGIQPDVIIARTDYPVNDDIIKKIALFCDVDQDAVIPLQTADNIYAVPLMIEQRGLGDYMLERLRLESEPPDLREWEAIVGRCRAVKDKLRIGIVGKYVELHDAYMSVKESVFHAAVSLDQDVEICWIHSGDLEKGKRLDELGDLDGIIVPGGFGYRGIEGKIAAAKFARENRVPYLGLCLGMQVMCIEYARNALGLDDANSTEFDVSTPHPVIDLMLEQRAITDMGGTMRLGEYPCQLQPNSAAAQAYGREQILERHRHRWEFNNVYRDVFSANGVYFSGLSPDSVLVEIAELEDHPFMLGSQFHPEFLSRPNRPHPLFLAFVEASAEYRDEMGRIREAPAWGVDSA

Annotated regions:
phrase: LHDAYMSVKESVFHAAVSLDQDVEICWIHSGDLEKGKRLDELGDLDGIIVPGGFGYRGIEGKIAAAKFARENRVPYLGLCLGMQVMCIEYARNALGLDDANSTEFDVSTPHPVIDLMLEQRAITDMGGTMRLGEYPCQLQPNSAAAQAYGREQILERHRHRWEFNNVYRDVFSANGVYFSGLSPDSVLVEIAELEDHPFMLGSQFHPEFLSRPNRPHPLFLAFV
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: KYIFCTGGVVSSVGKGLTVAAIGRILKARGLRVAIQKLDPYLNVDPGTMSPYQHGEVFVTSDGAEADLDLGHYERFVDENVSRLSNVTAGQVYLTVIEKERKGDYLGGTIQVVPHITNEIKRCIKLLGQRADADVVIVEVGGTAGDIESLPFLEALRQLRTEFSRRDTMYVHVTFLPHIGATDELKTKPTQHSVRELRGIGIQPDVIIARTDYPVNDDIIKKIALFCDVDQDAVIPLQTADNIYAVPLMIEQRGLGDYML
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: LRIGIVGKYVELHDAYMSVKESVFHAAVSLDQDVEICWIHSGDLEKGKRLDELGDLDGIIVPGGFGYRGIEGKIAAAKFARENRVPYLGLCLGMQVMCIEYARNALGLDDANSTEFDVSTPHPVIDLMLEQRAITDMGGTMRLGEYPCQLQPNSAAAQAYGREQILERHRHRWEFNNVYRDVFSANGVYFSGLSPDSVLVEIAELEDHPFMLGSQFHPEFLSRPNRPHPLFLAF
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain

phrase: KYIFCTGGVVSSVGKGLTVAAIGRILKARGLRVAIQKLDPYLNVDPGTMSPYQHGEVFVTSDGAEADLDLGHYERFVDENVSRLSNVTAGQVYLTVIEKERKGDYLGGTIQVVPHITNEIKRCIKLLGQRADADVVIVEVGGTAGDIESLPFLEALRQLRTEFSRRDTMYVHVTFLPHIGATDELKTKPTQHSVRELRGIGIQPDVIIARTDYPVNDDIIKKIALFCDVDQDAVIPLQTADNIYAVPLMIEQRGLGDYMLERLR
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal
Protein sequence:
MRLQQVIDRYEEVEARMGATSNTNEIIALSKEHAELRPVVEKARALMTVRKGLSEAEAMIASGDREMAELAEMEIDDLRERLPGLEQEMQLLLLPKDVDDKADIVLEVRAGTGGDEAALFAGDLFRMYTRFAQIMGWSVEIVDVAPGDAGGYKEIIANVSGDGVFGRMKWESGVHRVQRVPATETQGRIHTSAATVAVLPAPENIEIEVRADDIRIDTMRSSGAGGQHVNTTDSAVRITHLPTGIMVTSSEKSQHVNREKAMDQLKIRLYERERAEKDAARSEARASQIGSGDRSQKVRTYNYPENRLTDHRIGLTLYSLDRIITGDKLGDVIEALITEDQSRRLASLEAGA

Annotated regions:
phrase: ENIEIEVRADDIRIDTMRSSGAGGQHVNTTDSAVRITHLPTGIMVTSSEKSQHVNREKAMDQLKIRLYERERAEKDAARSEARASQIGSGDRSQKVRTYNYPENRLTDH
type: DOMAIN
name: Pep_chain_release_fac_I
description: Peptide chain release factor class I

phrase: EAMIASGDREMAELAEMEIDDLRERLPGLEQEMQLLLLPKDVDDKADIVLEVRAGTGGDEAALFAGDLFRMYTRFAQIMGWSVEIVDVAPGDAGGYKEIIANVSGDGVFGRMKW
type: DOMAIN
name: PCRF
description: Peptide chain release factor

phrase: DRYEEVEARMGATSNTNEIIALSKEHAELRPVVEKARALMTVRKGLSEAEAMIASGDREMAELAEMEIDDLRERLPGLEQEMQLLLLPKDVDDKADIVLEVRAGTGGDEAALFAGDLFRMYTRFAQIMGWSVEIVDVAPGDAGGYKEIIANVSGDGVFGRMKWESGVHRVQRVPATETQGRIHTSAAT
type: DOMAIN
name: PCRF
description: Peptide chain release factor

phrase: RSSGAGGQHVNTTDSA
type: DOMAIN
name: Pep_chain_release_fac_I
description: Peptide chain release factor class I
Protein sequence:
MKQYLDFLRLVKNTGTNKTDRTGIGTTSLFGYQMRFDLSDGFPLITTKRVHLPSVVHELLWFLSGATNIKYLQENGVRIWNEWADKNGDLGPIYGVQWRNWQNVRGESIDQIMQVIEQIKNTPDSRRIIVSAWNVGELENMALPPCHAFFQFYVALGKLSCQLYQRSADVFLGVPFNIASYALLTHMMAQQCDLEVGDFIWSGGDCHIYSNHTKQVEIQLARTPKTLATLKINNKPDSIFDYNFEDFEFINYVFDAYIKATVAI

Annotated regions:
phrase: KQYLDFLRLVKNTGTNKTDRTGIGTTSLFGYQMRFDLSDGFPLITTKRVHLPSVVHELLWFLSGATNIKYLQENGVRIWNEWADKNGDLGPIYGVQWRNWQNVRGESIDQIMQVIEQIKNTPDSRRIIVSAWNVGELENMALPPCHAFFQFYVALGKLSCQLYQRSADVFLGVPFNIASYALLTHMMAQQCDLEVGDFIWSGGDCHIYSNHTKQVEIQLARTPKTLATLKINNKPDSIFDYNFEDFEFINYVFDAYIKATVA
type: DOMAIN
name: Thymidate_synth/dCMP_Mease_dom
description: Thymidylate synthase/dCMP hydroxymethylase domain

phrase: RRIIVSAWNVGELENMALPPCHAFFQFY
type: ACTIVE_SITE
name: Thymidylate_synthase_AS
description: Thymidylate synthase, active site

phrase: QYLDFLRLVKNTGTNKTDRTGIGTTSLFGYQMRFDLSDGFPLITTKRVHLPSVVHELLWFLSGATNIKYLQENGVRIWNEWADKNGDLGPIYGVQWRNWQNVRGESIDQIMQVIEQIKNTPDSRRIIVSAWNVGELENMALPPCHAFFQFYVALGKLSCQLYQRSADVFLGVPFNIASYALLTHMMAQQCDLEVGDFIWSGGDCHIYSNHTKQV
type: DOMAIN
name: Thymidate_synth/dCMP_Mease_dom
description: Thymidylate synthase/dCMP hydroxymethylase domain
Protein sequence:
MVGVATQENGLLYRSVSSKPRPYDAGGDGGKGLSHVCLERLSYVPVLPDCLRGRHELEEGDARECVGGHEVICSLFPRLSNAHGGHSPLKMVNLHPAAAPGPDSEGGEQRPLRLGVVLSGGQAPGGHNVIIGLHDYLQRWHPGSTLVGFLAGPRGVMQNNYKILQAEELDGYRNQGGFHMIGSGRDAIAKPEQLAAAEKTCLAHDLDGMIVIGGDDSNTNAAIMAEHFLKQDLKTNVIGVPKTIDGDLKNTDVNISFGFDTACKVYSEMIGNIMIDAMSAKKYYHFIRLMGRAASHVTLECALQTHPQLALICEEVAAHRWGLKDVTRQIADMIAQRAELGKNFGVVLIPEGLVEFMHDVSTLIAELNEMLAKGINPADQSDVIAHLTPESADLFSNLTPGIRSELLEERDPHGNVQVSHIQTEKLLIKLVGLELARRKASGTYRGKFAALAHFFGYEGRCSLPSNFDATYCNALGQAAGALVASGRTGLMATVSNLQQPANKWTVGGTPLLSMMHLERRSGRDKPVIKKALVEMGGAPMASYTSMRAIWAIQDWCRSPGPIQFRGPSADMASITLALETNEGQPCLLQSSPEDDC

Annotated regions:
phrase: RLGVVLSGGQAPGGHNVIIGLHDYLQRWHPGSTLVGFLAGPRGVMQNNYKILQAEELDGYRNQGGFHMIGSGRDAIAKPEQLAAAEKTCLAHDLDGMIVIGGDDSNTNAAIMAEHFLKQDLKTNVIGVPKTIDGDLKNTDVNISFGFDTACKVYSEMIGNIMIDAMSAKKYYHFIRLMGRAASHVTLECALQTHPQLALICEEVAAHRWGLKDVTRQIADMIAQRAELGKNFGVVLIPEGLVEFMHDVSTLIA
type: DOMAIN
name: Phosphofructokinase_dom
description: Phosphofructokinase domain
Protein sequence:
MTDKEKRLQRQSRIRNFSIIAHIDHGKSTLADRILEKTAAITQREMKEQLLDSMDLERERGITIKLNSVQLKYQAKDGEEYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPSAEPERVRQEVEDVIGLDASEAVLASAKAGIGIEEILEQIVEKVPAPSGDPEAPLQALIFDSLYDAYRGVVAYIRVVQGTVKAGQKIKMMATGKEFEVTEVGVFTPKAVPADELTVGDVGFLTAAIKNVGDTRVGDTITSAENPAPEALPGYRKLNPMVYCGLYPIDTAKYNDLREALEKLELNDSALQYEAETSQALGFGFRCGFLGMLHMEIIQERIEREFNIDLITTAPSVIYDVYMTDGEKIVVDNPSNMPDPQKIDRVEEPFVKATMMVPNDFVGAVMELCQGKRGQFIDMQYLDANRVSIVYEIPLAEIVYEFFDQLKSNTKGYASFDYELIGYKPSKLVKMDIMLNGEKIDALSFIVHRDYAYERGKVIVEKLKELIPRQQFEVPVQAAIGTKIVARSTIKAMRKNVLAKCYGGDISRKRKLLEKQKEGKRRMKQVGSVEVPQEAFMAVLKMDDSGPKS

Annotated regions:
phrase: EPFVKATMMVPNDFVGAVMELCQGKRGQFIDMQYLDANRVSIVYEIPLAEIVYEFFDQLKSNTKGYASFDYELIGYKPS
type: DOMAIN
name: LepA_IV
description: Elongation factor 4, domain IV

phrase: GVVAYIRVVQGTVKAGQKIKMMATGKEFEVTEVGVFTPKAVPADELTVGDVGFLTAAIKNVGDTRVGDTI
type: DOMAIN
name: EFTu-like_2
description: Translation elongation factor EFTu-like, domain 2

phrase: DSMDLERERGITIKL
type: CONSERVED_SITE
name: G_TR_CS
description: Tr-type G domain, conserved site

phrase: VEEPFVKATMMVPNDFVGAVMELCQGKRGQFIDMQYLDANRVSIVYEIPLAEIVYEFFDQLKSNTKGYASFDYELIGYKPSKLVKM
type: DOMAIN
name: EFG_V-like
description: Elongation factor EFG, domain V-like

phrase: SRIRNFSIIAHIDHGKSTLADRILEKTAAITQREMKEQLLDSMDLERERGITIKLNSVQLKYQAKDGEEYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPSAEPERVRQEVEDVIGLDASEAVLASAKAGIGIEEILEQIVEKVPAP
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: NFSIIAHIDHGKS
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: ERGITIKL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: HLIDTPGHVD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: RSLAACEGAIL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: ILPVINKID
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: LNGEKIDALSFIVHRDYAYERGKVIVEKLKELIPRQQFEVPVQAAIGTKIVARSTIKAMRKNVLAKCYGGDISRKRKLLEKQKEGKRRMKQVGSVEVPQEAFMAVL
type: DOMAIN
name: LepA_CTD
description: GTP-binding protein LepA, C-terminal

phrase: RIRNFSIIAHIDHGKSTLADRILEKTAAITQREMKEQLLDSMDLERERGITIKLNSVQLKYQAKDGEEYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPSAEPERVRQEVEDVIGLDASEAVLASAKAGIGIEEILEQIVEKV
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: EPFVKATMMVPNDFVGAVMELCQGKRGQFIDMQYLDANRVSIVYEIPLAEIVYEFFDQLKSNTKGYASFDYELIGYKPSKLVKMD
type: DOMAIN
name: EFG_V-like
description: Elongation factor EFG, domain V-like

phrase: RNFSIIAHIDHGKSTLADRILEKTAAITQREMKEQLLDSMDLERERGITIKLNSVQLKYQAKDGEEYIFHLIDTPGHVDFTYEVSRSLAACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPSAEPERVRQEVEDVIGLDASEAVLASAKAGIGIEEIL
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain