nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
METPAFTILLTVFLWIQEASGQRTCPPIPPRLPDFSAEYSLPFFRADKPVQNIAVTAYTPPQIFVGHQNAIVALNDSMQKIWEVKTGPLGSPDCGTCHICHTEPDPNDHVDTDNQVLLMDPAVFLPYLYMCGSTQYGICYFIDISSPQPEPKCLYREKLNFKDNCPDCLASPLGTKVTIVEYGATSYFFIAATVNDRVAQNYPRRSISVARPLSTEDGFDMVMSGLTVLPELRQSYAIDYIYTFSTEEYVYFLSLQRENPSNRNSAFQTRLGRLPISIPEVWMYREVVLECRYNPKRRRRRRENPKDIVYNGLQAAHFGRAGLDLAQELRVDTKEDILYGVFAEVNERGEAKKNSAFCAFPLLKVNHAIEMGVEACCKSGTEQLSRGLCHYQLCENCPHESSWDNYTCSNKPTLVSKPHYRVDLFNNRMKGVLFTAVLVNIIGNHTIGHFGTSDGRIMQVILTQYKPNFFSNFSLGNTEVSRTATVHSEDYLLFVAGNKLFKVPTVGPGCAHLWTCSLCLTAPSFMNCGWCSGKCSRKHECASHWNNYSCTPVITEFFPQMAPAGGETEVTLCGSEFRSLSSVIDEKTHVITVSSGAPCALLPNQKSSEKLVCKILNQAPNQNVNITLEVHEGKVDGPYSIEGTAQISGLSFVEPQIMEIRPDYGPMFGGTKVTLQGKYLNSGTQRQVFFANKKCSISRVFEEPGGLSSIVCHTDATESVGEVPVKVVIDSFEVQAAGKFFYKKNPVITSVKPLCSFQSGSRLIIEGQ

Annotated regions:
phrase: TPVITEFFPQMAPAGGETEVTLCGSEFRSLSSVIDEKTHVITVSSGAPCALLPNQKSSEKLVCKILNQAPNQNVNITLEVHEGKVDGPYSI
type: DOMAIN
name: IPT_dom
description: IPT domain

phrase: EPQIMEIRPDYGPMFGGTKVTLQGKYLNSGTQRQVFFANKKCSISRVFEEPGGLSSIVCHTDATESVGEVPVKVVIDSFEVQAAGKFFY
type: DOMAIN
name: IPT_dom
description: IPT domain

phrase: PQIMEIRPDYGPMFGGTKVTLQGKYLNSGTQRQVFFANKKCSISRVFEEPGGLSSIVCHTDATESVGEVPVKVVIDSFEVQAAGKFF
type: DOMAIN
name: IPT_dom
description: IPT domain

phrase: PVITEFFPQMAPAGGETEVTLCGSEFRSLSSVIDEKTHVITVSSGAPCALLPNQKSSEKLVCKILNQAPNQNVNITLEVH
type: DOMAIN
name: IPT_dom
description: IPT domain

phrase: RTCPPIPPRLPDFSAEYSLPFFRADKPVQNIAVTAYTPPQIFVGHQNAIVALNDSMQKIWEVKTGPLGSPDCGTCHICHTEPDPNDHVDTDNQVLLMDPAVFLPYLYMCGSTQYGICYFIDISSPQPEPKCLYREKLNFKDNCPDCLASPLGTKVTIVEYGATSYFFIAATVNDRVAQNYPRRSISVARPLSTEDGFDMVMSGLTVLPELRQSYAIDYIYTFSTEEYVYFLSLQRENPSNRNSAFQTRLGRLPISIPEVWMYREVVLECRYNPKRRRRRRENPKDIVYNGLQAAHFGRAGLDLAQELRVDTKEDILYGVFAEVNERGEAKKNSAFCAFPLLKVNHAIEMGVEACCKSGTEQLSRGLCHYQLCENCPHESSWDNYTCSNKPTLVSKPHYRVDLFNNRMKGVLFTAVLVNIIGNHTIGHFGTSDGRIMQVILTQYKPNFFSNFSLGNTEVSRTATVHSEDYLLFVAGNKLFKVP
type: DOMAIN
name: Semap_dom
description: Sema domain

phrase: VQNIAVTAYTPPQIFVGHQNAIVALNDSMQKIWEVKTGPLGSPDCGTCHICHTEPDPNDHVDTDNQVLLMDPAVFLPYLYMCGSTQYGICYFIDISSPQPEPKCLYREKLNFKDNCPDCLASPLGTKVTIVEYGATSYFFIAATVNDRVAQNYPRRSISVARPLSTEDGFDMVMSGLTVLPELRQSYAIDYIYTFSTEEYVYFLSLQRENPSNRNSAFQTRLGRLPISIPEVWMYREVVLECRYNPKRRRRRRENPKDIVYNGLQAAHFGRAGLDLAQELRVDTKEDILYGVFAEVNERGEAKKNSAFCAFPLLKVNHAIEMGVEACCKSGTEQLSRGLCHYQLCENCPHESSWDNYTCSNKPTLVSKPHYRVDLFNNRMKGVLFTAVLVNIIGNHTIGHFGTSDGRIMQVILTQYKPNFFSNFSLGNTEVSRTATVHSE
type: DOMAIN
name: Semap_dom
description: Sema domain

phrase: GCAHLWTCSLCLTAPSFMNCGWCSGKCSRKHECASHWNNYSC
type: DOMAIN
name: PSI
description: PSI domain

phrase: VDTKEDILYGVFAEVNERGEAKKNSAFCAFPLLKVNHAIEMGVEACCKSGTEQLSRGLCHYQLCENCPHESSWDNYTCSNKPTLVSKPHYRVDLFNNRMKGVLFTAVLVNIIGNHTIGHFGTSDGRIMQVILTQYKPNFFSNFSLG
type: DOMAIN
name: Semap_dom
description: Sema domain
Protein sequence:
MKKFAVFGNPIAQSLSPTIHQMFADQVGEKISYEKILAPEDGFVEAAKAFLAQEGAVGCNVTMPFKLDAFNLAKVDDQAAKDAQAVNTLMNGDRGELLGFNTDGVGLVNDLLNSGVKIKDKHVLLIGAGGAARGVISPLLKAGAATLTIANRTKAKAEEVASAASNPKVDVVALEDIATIAPHIIINSTAASLSNALPCSLNDGVLQHCEVVYDMVYKNSPTRFMRDAAELGVKTQIDGLGMLVEQAAEAFYIWTQKRPDTSDIVKRVRDIVEQSEKRN

Annotated regions:
phrase: GLGMLVEQAAEAFYIWTQKRPDTSDIVKR
type: DOMAIN
name: SDH_C
description: SDH, C-terminal

phrase: KIKDKHVLLIGAGGAARGVISPLLKAGAATLTIANRTKAKAEEVASAASNPKVDVVALEDIATIAPHIIINSTAA
type: DOMAIN
name: Shikm_DH/Glu-tRNA_Rdtase
description: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase

phrase: VFGNPIAQSLSPTIHQMFADQVGEKISYEKILAPEDGFVEAAKAFLAQEGAVGCNVTMPFKLDAFNLAKVDDQAAKDAQAVNT
type: DOMAIN
name: Shikimate_DH-bd_N
description: Shikimate dehydrogenase substrate binding, N-terminal
Protein sequence:
MGGKMKAIVKNENAFGATLKEIPIPSINENEVLIKVQAASICGTDVHIYNWDQWAQKRIKTPQVFGHEFSGIVAETGKHVTNVKTGDYVSAETHFVCGTCVPCLTGKHHVCTHTKILGVDTAGSFAEYVKVPARNVWKNPADMDPAVASVQEPLGNAVHTVLESSQLAGGSAAIIGCGPIGLMAVAVAKAAGASRIAAIDKNDYRLALAKKLGATITISADKEDPLEVIDTLTGGEGIDLVCEMSGHPAAIAQGLKMAANGGRFHMLSLPERPVTVDLTNDVVFKGLTVQGITGRKMFETWRQVSHLLESGLVDLTPVITHQLPLEDFEKGFDLMRKGQCGKVILIP

Annotated regions:
phrase: GATLKEIPIPSINENEVLIKVQAASICGTDVHIYNWDQWAQKRIKTPQVFGHEFSGIVAETGKHVTNVKTGDYVSAETHFVCGTCVPCLTGKHHVCTHTKILGVDTAGSFAEYVKVPARNVWKNPADMDPAVASVQEPLGNAVHTVLESSQLAGGSAAIIGCGPIGLMAVAVAKAAGASRIAAIDKNDYRLALAKKLGATITISADKEDPLEVIDTLTGGEGIDLVCEMSGHPAAIAQGLKMAANGGRFHMLSLPERPVTVDLTNDVVFKGLTVQGITGRKMFETWRQVSHLLESGLVDLTPVITHQLPLEDFEKGFDLMRKGQCGKVI
type: DOMAIN
name: PKS_ER
description: Polyketide synthase, enoylreductase domain

phrase: ENEVLIKVQAASICGTDVHIYNWDQWAQKRIKTPQVFGHEFSGIVAETGKHVTNVKTGDYVSAETHFVCGTCVPCLTGKHHVCTHTKILGVDTAGSFAEYVKVPARNVWKN
type: DOMAIN
name: ADH-like_N
description: Alcohol dehydrogenase-like, N-terminal

phrase: PIGLMAVAVAKAAGASRIAAIDKNDYRLALAKKLGATITISADKEDPLEVIDTLTGGEGIDLVCEMSGHPAAIAQGLKMAANGGRFHMLSLPERPVTVDLTNDVVFKGLTVQGITGRKMFETWRQVSHLL
type: DOMAIN
name: ADH-like_C
description: Alcohol dehydrogenase-like, C-terminal

phrase: GHEFSGIVAETGKH
type: CONSERVED_SITE
name: ADH_Zn_CS
description: Alcohol dehydrogenase, zinc-type, conserved site
Protein sequence:
MFNAIVSADTLQATLDSVSVLVDECKIHLEEDGLEIRAVDPANVGMVDLRLDAAAFESYETDGGLIGVNLSRLEDIAGMADAGQLVHLDLDEETRKLHISIDGLEYTLALIDPDSIRQEPDLPDLDLSANIVIEGKDIDRSVTAADMVSDHIALGVDATDELFYVDAEGDTDDVHLELTRDDLIDLTPGDAHSLFSLDYLKNMNKAIPKDAEVEMELGEEFPVKMHFSFAEGQGRVTYMLAPRIQSE

Annotated regions:
phrase: VSADTLQATLDSVSVLVDECKIHLEEDGLEIRAVDPANVGMVDLRLDAAAFESYETDGGLIGVNLSRLEDIAGMADAGQLVHLDLDEETRKLH
type: DOMAIN
name: Pr_cel_nuc_antig_N
description: Proliferating cell nuclear antigen, PCNA, N-terminal

phrase: GLEIRAVDPANVGMVDLRLDAAA
type: CONSERVED_SITE
name: Pr_cel_nuc_antig_CS
description: Proliferating cell nuclear antigen, PCNA, conserved site
Protein sequence:
MKNNNFRLSAAGKLAAALAIILAASAGAYAAEIVAANGANGPGVSTAATGAQVVDIVAPNGNGLSHNQYQDFNVNQPGAVLNNSREAGLSQLAGQLGANPNLGGREASVILNEVIGRNPSLLHGQQEIFGMAADYVLANPNGISCQSCGFINTSHSSLVVGNPLVENGVLQGYSTFGNRNTLSLNGTLNAGGVLDLIAPKIDSRGEVIVQDFKQSNGKVTSAAINAISGLNRVARDGTVQASQQMPTALDSYYLGSMQAGRINIINTAQGSGVKLAGSLNAGDELKVKAYDIRSESRVDDASSNKNGGDNYQNYRGGIYVNDRSSSQTLTRTELKGKNISLVADNHAHLTATDIRGEDITLQGGKLTLDGQQLKQTQGHTDDRWFYSWQYDVTREREQLQQAGSTVAASGSAKLISTQEDVKLLGANVSADRALSVKAARDVHLAGLVEKDKSSERGYQRNHTSSLRTGRWSNSDESESLKASELRSEGELTLKAGRNVSTQGAKVHAQRDLTIDADNQIQVGVQKTANAKAVRDDKTSWGGIGGGDNKNNSNRREISHASELTSGGTLRLNGQQGVTITGSKARGQKGGEVTATHGGLRIDNALSTTVDKIDARTGTAFNITSSSHKADNSYQSSTASELKSDTNLTLVSHKDADVIGSQVASGGELSVESKTGNINVKAAERQQNIDEQKTALTVNGYAKEAGDKQYRAGLRIEHTRDSEKTTRTENSASSLSGGSVKLKAEKDVTFSGSKLVADKGDASVSGNKV

Annotated regions:
phrase: AANGANGPGVSTAATGAQVVDIVAPNGNGLSHNQYQDFNVNQPGAVLNNSREAGLSQLAGQLGANPNLGGREASVILNEVIGRNPSLLHGQQEIFGMAADYVLANPNGISCQSCGFINTSHSSLVVGNPLVENGVLQGYSTFGNRNTLSLNGTLNAGGVLDLIAPKIDSRGEVIVQDFKQSNGKVTSAAINAISGLNRVARDGTVQASQQMPTALDSYYLGSMQAGRINIINTAQGSGVKLAGSLNA
type: DOMAIN
name: FhaB/CdiA-like_TPS
description: Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain

phrase: HNQYQDFNVNQPGAVLNNSREAGLSQLAGQLGANPNLGGREASVILNEVIGRNPSLLHGQQEIFGMAADYVLANPNGISCQSCGFINTSHSS
type: DOMAIN
name: FhaB/CdiA-like_TPS
description: Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain

phrase: NSDESESLKASELRSEGELTLKAGRNVSTQGAKVHAQRDLTIDADNQIQVGVQKTANAKAVRDDKTSWGGIGGGDNKNNSNRREISHASELTSGGTLRLNGQQGVTITGSKARGQKGG
type: REPEAT
name: Hemagglutinin_rpt
description: Hemagglutinin repeat

phrase: EREQLQQAGSTVAASGSAKLISTQEDVKLLGANVSADRALSVKAARDVHLAGLVEKD
type: REPEAT
name: Hemagglutinin_rpt
description: Hemagglutinin repeat

phrase: ITSSSHKADNSYQSSTASELKSDTNLTLVSHKDADVIGSQVASGGELSVESKTGNINVKAAERQQNIDEQKTALTVNGYAKEAGDKQYRAGLRIEHTRDSEKTTRTENSASSLSGGSVKLKAEKDVTFSGSKLVADKGDASVSG
type: REPEAT
name: Hemagglutinin_rpt
description: Hemagglutinin repeat

phrase: ATGAQVVDIVAPNGNGLSHNQYQDFNVNQPGAVLNNSREAGLSQLAGQLGANPNLGGREASVILNEVIGRNPSLLHGQQEIFGMAADYVLANPNGISCQSCGFINTSHSSLVVGNPLVEN
type: DOMAIN
name: FhaB/CdiA-like_TPS
description: Filamentous haemagglutinin FhaB/tRNA nuclease CdiA-like, TPS domain
Protein sequence:
MSVNLAVVGATGAVGRIVLEQLALRKLPINRLKLLASQRSVGKEVRFADETLKVQLLEPDAFQGIDIVVASTPDEVSAEFASWATDAGAVVVDESGYWRMDPKVPLVIPEVNPEAIHDHQGIIASPNCSTTQMVVALAALHRHSPVRRVVVSTYQATSGAGLAGNEELYDSTRSALTGKTHPAKTFQYPIAFNLIPQIGSEKEAGYTSEEMKMVYETRKIMGDDDIVVCPTCVRVPVTIGHSESILVETADPISVDKARELFASAPGVTLVDDLDNKQYPMPQDCEGKDDVFVGRVRKDLSSPNGLAFWCVSDNLRKGAATNAVQIAELLIQKLAAASS

Annotated regions:
phrase: NLAVVGATGAVGRIVLEQLALRKLPINRLKLLASQRSVGKEVRFADETLKVQLLEPDAFQGIDIVVASTPDEVSAEFASWATDAGAVVVDESGYWRMDPKVPLVIPEVNPEAIHD
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: LAVVGATGAVGRIVLEQLALRKLPINRLKLLASQRSVGKEVRFADETLKVQLLEPDAFQGIDIVVASTPDEVSAEFASWATDAGAVVVDESGYWRMDPKVPLVIPEVNPEAIH
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: LAALHRHSPVRRVVVSTYQATSGAGLAGNEELYDSTRSALTGKTHPAKTFQYPIAFNLIPQIGSEKEAGYTSEEMKMVYETRKIMGDDDIVVCPTCVRVPVTIGHSESILVETADPISVDKARELFASAPGVTLVDDLDNKQYPMPQDCEGKDDVFVGRVRKDLSSPNGLAFWCVSDNLR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain
Protein sequence:
MDEWYGQVAPREKLLKYGAAVLTDAELLAIFLRTGIPGMHVMKMAEYLIETFGSLHGLISADYQTLCAHKGIGASKYSQIQAIGELACRCFSSHLMRESVLLNPGITQKFLQNILSHREREIFLVVFLDNQHRVIRHEEMFTGTISSVEVHPREIVREALKVNAAALILAHNHPSGKAEPSQADRLITTQVIKACSLLDIRVLDHLVVGRGECVSFAERGWL

Annotated regions:
phrase: HNHPS
type: CONSERVED_SITE
name: UPF0758_CS
description: Uncharacterised protein family UPF0758, conserved site

phrase: EWYGQVAPREKLLKYGAAVLTDAELLAIFLRTGIPGMHVMKMAEYLIETFGSLHGLISADYQTLCAHKGIGASK
type: DOMAIN
name: UPF0758_N
description: UPF0758, N-terminal

phrase: TQKFLQNILSHREREIFLVVFLDNQHRVIRHEEMFTGTISSVEVHPREIVREALKVNAAALILAHNHPSGKAEPSQADRLITTQVIKACSLLDIRVLDHLVVGRGECVSFAERG
type: DOMAIN
name: RadC_JAB
description: RadC-like JAB domain

phrase: KFLQNILSHREREIFLVVFLDNQHRVIRHEEMFTGTISSVEVHPREIVREALKVNAAALILAHNHPSGKAEPSQADRLITTQVIKACSLLDIRVLDHLVVGRGECVSF
type: DOMAIN
name: RadC_JAB
description: RadC-like JAB domain

phrase: VLLNPGITQKFLQNILSHREREIFLVVFLDNQHRVIRHEEMFTGTISSVEVHPREIVREALKVNAAALILAHNHPSGKAEPSQADRLITTQVIKACSLLDIRVLDHLVVGRGECVSFAERGW
type: DOMAIN
name: MPN
description: MPN domain
Protein sequence:
MLLFTVVFFLLLPTLKYENLSKFPTKYLFVTGGVTSSLGKGIISASLGKLLSSRGYSVTIQKLDPYINIDPGTMNPYEHGECFVTNDGAETDLDLGHYERFLNNETSQANNVTTGRIYQTVIKKERKGDYLGKTVQVIPHITDEIKKRIKILGDTGKFDFVITEIGGTVGDIEALPFIEAVRQLKWELEDNSLFIHLTLVPYLSAAAELKTKPTQHSVKTLLESGIQPDVLVCRTEHPLNSSLKRKIARFCNVERDAVIESMDASTIYEVPLLMQKEGLDKVVLRKLGLEDNTDGDLEQWCNFLEGLQNPKQIITIGLVGKYVELQDAYKSISEAIIHAGAKNSCKVKVNWIHSEKINETNVTEKLSGLSGVLVAPGFGDRGMEGKISTIKYLREYNIPFFGICLGMQSAVIEYARNVLGFKDANSTEMNNSTSYPVIDLMEEQKEVTKKGGTMRLGAYDCNISKDSKSFESYKQTIISERHRHRFEFNNKYKSDFEESGLKAMGINPKNNLVEIIEIPTHPWFVGVQFHPEYKSTVANPHPLFVGFIKACIQKNKKYTDETK

Annotated regions:
phrase: ITIGLVGKYVELQDAYKSISEAIIHAGAKNSCKVKVNWIHSEKINETNVTEKLSGLSGVLVAPGFGDRGMEGKISTIKYLREYNIPFFGICLGMQSAVIEYARNVLGFKDANSTEMNNSTSYPVIDLMEEQKEVTKKGGTMRLGAYDCNISKDSKSFESYKQTIISERHRHRFEFNNKYKSDFEESGLKAMGINPKNNLVEIIEIPTHPWFVGVQFHPEYKSTVANPHPLFVGF
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain

phrase: LQDAYKSISEAIIHAGAKNSCKVKVNWIHSEKINETNVTEKLSGLSGVLVAPGFGDRGMEGKISTIKYLREYNIPFFGICLGMQSAVIEYARNVLGFKDANSTEMNNSTSYPVIDLMEEQKEVTKKGGTMRLGAYDCNISKDSKSFESYKQTIISERHRHRFEFNNKYKSDFEESGLKAMGINPKNNLVEIIEIPTHPWFVGVQFHPEYKSTVANPHPLFVGFI
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: KYLFVTGGVTSSLGKGIISASLGKLLSSRGYSVTIQKLDPYINIDPGTMNPYEHGECFVTNDGAETDLDLGHYERFLNNETSQANNVTTGRIYQTVIKKERKGDYLGKTVQVIPHITDEIKKRIKILGDTGKFDFVITEIGGTVGDIEALPFIEAVRQLKWELEDNSLFIHLTLVPYLSAAAELKTKPTQHSVKTLLESGIQPDVLVCRTEHPLNSSLKRKIARFCNVERDAVIESMDASTIYEVPLLMQKEGLDKVVLRKLG
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: KYLFVTGGVTSSLGKGIISASLGKLLSSRGYSVTIQKLDPYINIDPGTMNPYEHGECFVTNDGAETDLDLGHYERFLNNETSQANNVTTGRIYQTVIKKERKGDYLGKTVQVIPHITDEIKKRIKILGDTGKFDFVITEIGGTVGDIEALPFIEAVRQLKWELEDNSLFIHLTLVPYLSAAAELKTKPTQHSVKTLLESGIQPDVLVCRTEHPLNSSLKRKIARFCNVERDAVIESMDASTIYEVPLLMQKEGLDKVVL
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal
Protein sequence:
MRRASRDYSKYLRGSEEMGSCGSGAPHEAPLHPAPPPAPAAPPPSHAASRSMFVALLGLGLGQVVCSVALFLYFRAQMDPNRIAEDSTECIYRIFRLHENDMQDTSVESEDTRLIPDSCRRIRQAFQGAVQKELQHIFASQHIRAERVVESSSSGLTNRGKVESQPFAHLTINATNIPSGSHKVSLSSWYHDRGWAKISNMTLKNGKLIVNQNGFYYLYANICFRHHETSGDLPTEYLQLMVYVTKTSVKIPSSQTLMKGGSTKYWSGNSEFHFYSINVGGFFKLRSGEEISIEVSNPFLLDPDQDATYFGAFKVGDID

Annotated regions:
phrase: PFAHLTINATNIPSGSHKVSLSSWYHDRGWAKISNMTLKNGKLIVNQNGFYYLYANICFRHHETSGDLPTEYLQLMVYVTKTSVKIPSSQTLMKGGSTKYWSGNSEFHFYSINVGGFFKLRSGEEISIEVSNPFLLDPDQDATYFGAFK
type: DOMAIN
name: TNF_dom
description: Tumour necrosis factor domain

phrase: SWYHDRGWAKISNMTLKNGKLIVNQNGFYYLYANICFRHHETSGDLPTEYLQLMVYVTKTSVKIPSSQTLMKGGSTKYWSGNSEFHFYSINVGGFFKLRSGEEISIEVSNPFLLDPDQDATYFGAFK
type: DOMAIN
name: TNF_dom
description: Tumour necrosis factor domain

phrase: PFAHLTINATNIPSGSHKVSLSSWYHDRGWAKISNMTLKNGKLIVNQNGFYYLYANICFRHHETSGDLPTEYLQLMVYVTKTSVKIPSSQTLMKGGSTKYWSGNSEFHFYSINVGGFFKLRSGEEISIEVSNPFLLDPDQDATYFGA
type: DOMAIN
name: TNF_dom
description: Tumour necrosis factor domain

phrase: AHLTINATNIPSGSHKVSLSSWYHDRGWAKISNMTLKNGKLIVNQNGFYYLYANICFRHHETSGDLPTEYLQLMVYVTKTSVKIPSSQTLMKGGSTKYWSGNSEFHFYSINVGGFFKLRSGEEISIEVSNPFLLDPDQDATYFGAFK
type: DOMAIN
name: TNF_dom
description: Tumour necrosis factor domain
Protein sequence:
MGDPGSRARRERPGGRSWCLRRVGMDAEWLLLEDGSEVTLGRGFGVTYQLVSKLCPLMISRNHCVLKQNTEGQWTIMDNKSLNGVWLNRVRLEPLEVYSLHTGDRVQLGVPLENKESAEYEYEVTEEDWEKMCPYLAPKNDQILGKNKGLRTKRKCSLDELEGPEAEGPSHLKFKMNKVSSEPGQPLRSRGKGELASGPSEHWEPRVTSLEPSENVSGAHVFSGPTKVLALHHHKRKASNLSVSQSRLELFKVTMSRILKLKTQMQEKQVAVLNEKKQTQKGDSKNIVQMEQELQDLQSQLCAEQAQQEARVEQLEKTFEEEQQYLQGLEKEQGEEDLKQQLAQALQEHQALMEELNRSKKDFEAIIQAKNKELEQTKEEKEKVQAQKEEVLSHMNDVLENELQCIICSEYFIEAVTLNCAHSFCSYCINEWMKRKVECPICRKDIKSKTPSLVLDNCISKMVDNLSSEVKERRTDLIKRRKGVKDVI

Annotated regions:
phrase: CIICSEYFIEAVTLNCAHSFCSYCINEWMKRKVECPI
type: DOMAIN
name: Znf_C3HC4_RING-type
description: Zinc finger, C3HC4 RING-type

phrase: CAHSFCSYC
type: CONSERVED_SITE
name: Znf_RING_CS
description: Zinc finger, RING-type, conserved site

phrase: VTLGRGFGVTYQLVSKLCPLMISRNHCVLKQNTEGQWTIMDNKSLNGVWLNRVR
type: DOMAIN
name: FHA_dom
description: Forkhead-associated (FHA) domain

phrase: CIICSEYFIEAVTLNCAHSFCSYCINEWMKRKVECPI
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: CIICSEYFIEAVTLNCAHSFCSYCINEWMKRKVECPIC
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: TLGRGFGVTYQLVSKLCPLMISRNHCVLKQNTEGQWTIMDNKSLNGVWLNRVRLEPLEVYSLHTGDRVQL
type: DOMAIN
name: FHA_dom
description: Forkhead-associated (FHA) domain

phrase: EVTLGRGFGVTYQLVSKLCPLMISRNHCVLKQNTEGQWTIMDNKSLNGVWLNRVR
type: DOMAIN
name: FHA_dom
description: Forkhead-associated (FHA) domain
Protein sequence:
MRILEGKTIILGISGGIAAYKGAELCRLLVQEGAAVRVIMTRAAREFINPLTFSTLTGFPALTEIFGVDSGGTLTHIDLARAADLFLVAPATANILGKLAAGLADDLLTTTALAVDCPTLVAPAMNVNMFAKAVVQDNLALLQRRGWGIIEPEEGFLACGTTGKGRLASLERIVAACRRALAPRDFQDRTVLVTAGGTREPLDPVRYIGNYSSGKMGYALARAAWERGARVTLISASQLPPPPGVEVVPVERAAEMLACLQEHFAAADVVIMAAAVADFRPARVAGRKIKKEDQQELTVHLKPTEDILTALAQARRNQLLVGFAAETEDLLANAGHKLAAKGLDLIVANNITRPGAGFGSETNIVTIIYPGGQYTELPQLPKLEVAYRILDAITTLPRFQRGESGRKGRNSE

Annotated regions:
phrase: KTIILGISGGIAAYKGAELCRLLVQEGAAVRVIMTRAAREFINPLTFSTLTGFPALTEIFGVDSGGTLTHIDLARAADLFLVAPATANILGKLAAGLADDLLTTTALAVDCPTLVAPAMNVNMFAKAVVQDNLALLQRRGWGIIEPEEGFLACGTTGKGRLASLERIVAACRR
type: DOMAIN
name: Flavoprotein
description: Flavoprotein

phrase: QDRTVLVTAGGTREPLDPVRYIGNYSSGKMGYALARAAWERGARVTLISASQLPPPPGVEVVPVERAAEMLACLQEHFAAADVVIMAAAVADFRPARVAGRKIKKEDQQELTVHLKPTEDILTALAQARRNQLLVGFAAETEDLLANAGHKLAAKGLDLIVANNITRPGAGFGSETNIVTI
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal
Protein sequence:
MIVLGIEGTAHTISAGIIDEENIYYTSSRTYHPKDGGIHPREAANHHFENILPVIREALKESSMNIGDIDLIGFSRGPGLGPCLKIVAVAARSLSIRNNIPLLGVNHPMGHIEIGKRTTGSKDPLVLYVSGGNTQIITGGKGKYRVVGETLDIGIGNMLDKFARDIGIPFPGGPAIEQYALRGKELLTLPYSVKGMDTAFSGIYTAAKHLKEKGHNVEDICYSIQEVAFSMLCETLERAIYTTGKREILLTGGVARNGRLREMISILAKEANCKVFETPVEYCMDNGSMIAQAALMMYQNGIRHNLEDTSVDQKFRIDQAPAPWISSGMIEVIEDQGAESVISHNEFLGINAVIKKRLSKSYRDKRLDGMILNERTGREMRILAKGIESGVNFPILLDYNSEGTEIVLEKIEGSLLNAVLEKGENLTHNIFSLGKEVAKMHNSNISHGDLNLNNIIVRGENIFIIDPSLGSLSPGVEEFATDIKMVNDFLAGYEDRGKALFDIFLESYKSNFQRWDEVMSVLKEMEVRKRYS

Annotated regions:
phrase: TSSRTYHPKDGGIHPREAANHHFENILPVIREALKESSMNIGDIDLIGFSRGPGLGPCLKIVAVAARSLSIRNNIPLLGVNHPMGHIEIGKRTTGSKDPLVLYVSGGNTQIITGGKGKYRVVGETLDIGIGNMLDKFARDIGIPFPGGPAIEQYALRGKELLTLPYSVKGMDTAFSGIYTAAKHLKEKGHNVEDICYSIQEVAFSMLCETLERAIYTTGKREILLTGGVARNGRLREMISILAKEANCKVFETPVEYCMDNGSMI
type: DOMAIN
name: Gcp-like_dom
description: Gcp-like domain

phrase: MILNERTGREMRILAKGIESGVNFPILLDYNSEGTEIVLEKIEGSLLNAVLEKGENLTHNIFSLGKEVAKMHNSNISHGDLNLNNIIVRGENIFIIDP
type: DOMAIN
name: RIO_dom
description: RIO-type domain

phrase: MIVLGIEGTAHTISAGIIDEENIYYTSSRTYHPKDGGIHPREAANHHFENILPVIREALKESSMNIGDIDLIGFSRGPGLGPCLKIVAVAARSLSIRNNIPLLGVNHPMGHIEIGKRTTGSKDPLVLYVSGGNTQIITGGKGKYRVVGETLDIGIGNMLDKFARDIGIPFPGGPAIEQYALRGKELLTLPYSVKGMDTAFSGIYTAAKHLKEKGHNVEDICYSIQEVAFSMLCETLERAIYTTGKREILLTGGVARNGRLREMISILAKEANCKVFETPVEYCMDNGSMIAQAALMMYQNGIRHNLEDTSVDQKFRIDQAPAP
type: DOMAIN
name: Gcp-like_dom
description: Gcp-like domain
Protein sequence:
MIDYTQYPDARGHFGIHGGRFVSETLMAALEDLENLYNRMKNDEQFLAEFDRDLAYYVGRPSPLYYAERWSKKLGGAQIYLKREDLNHTGSHKVNNTIGQALLAKLSGKKRIIAETGAGQHGVATATIAARLGLECVVFMGAEDVKRQAMNVYRMRLLGATVIPVQSGSKTLKDAMNEAMRDWVTNVDSTYYVIGTVAGPHPYPQLVRDFQSIIGREARRQIQEQAGRLPDALVACVGGGSNAIGLFYPFLNDQDVKMYGVEAAGHGIETGKHSAPLNAGHVGVLHGNRTYLMSDPQGQIIETHSISAGLDYPGVGPEHSFLKDMHRVEYVPIDDNEALQGFRDLTRIEGIIPAIESAHAMAYVTKLAPTMDKDQIIIANVSGRGDKDLMTVARIDGIEMVEM

Annotated regions:
phrase: LNHTGSHKVNNTIG
type: CONSERVED_SITE
name: Trp_synth_b_CS
description: Tryptophan synthase, beta chain, conserved site

phrase: GRPSPLYYAERWSKKLGGAQIYLKREDLNHTGSHKVNNTIGQALLAKLSGKKRIIAETGAGQHGVATATIAARLGLECVVFMGAEDVKRQAMNVYRMRLLGATVIPVQSGSKTLKDAMNEAMRDWVTNVDSTYYVIGTVAGPHPYPQLVRDFQSIIGREARRQIQEQAGRLPDALVACVGGGSNAIGLFYPFLNDQDVKMYGVEAAGHGIETGKHSAPLNAGHVGVLHGNRTYLMSDPQGQIIETHSISAGLDYPGVGPEHSFLKDMHRVEYVPIDDNEALQGFRDLTRIEGIIPAIESAHAMAYVTKLAPTMDKDQIIIANVS
type: DOMAIN
name: TrpB-like_PALP
description: Tryptophan synthase beta chain-like, PALP domain
Protein sequence:
MSDSHHTPEAASASLRHVRAKGEPRFPDGPKADPAGSHFERRIRSFQPRRSRVTAGQADALQRLWPLWGLDIDGRRVVDLAELFGNARPVVLEIGFGMGETTARMAAADPDTNILAADVHTPGQGNLLGLAERQELPNIRVANGDAIILLREMLAPGSLAGLRVYFPDPWPKKRHHKRRLIQPEFLTLAATRLAPGAVVHCATDWEPYAEQMLDVLTAHPDFENTVPGGGFAPRPEHRPLTRFEGQGLDKGHVVNDLLFRRVQHKEPPPNG

Annotated regions:
Protein sequence:
MDATANTGKCPFHHGSATTHTTSGTTNKDWWPNQLNLNILHQHDRKSNPLGDDFDYAEEFGKLDYQALKQDLRELMTDSQDWWPADYGHYGPFFIRMAWHSAGTYRTGDGRGGAGSGTQRFAPLNSWPDNGNLDKARRLLWPIKQKYGNKISWADLMILTGNVAIESMGGKTFGFGGGRADVWHPEEDIYWGAEKEWLGDKRYTGERDLDNPLAAVQMGLIYVNPEGPNGKPDPLASARDIRETFKRMGMNDEETVALVAGGHTFGKAHGAGDPVHVGAEPEGASIEAQGLGWLSTHGSGKGRDTITSGIEGAWTANPTQWDNGFFDALFGYEWELTKSPAGAHQWAPINPADEHLAPDAEDSSIRVKTIMTTADMALRVDPEYEKISRRFHANPEEFADAFARAWFKLTHRDMGPRARYLGPEVPRELLIWQDPIPAGNGDFTDAEIENIKTLILDSGLTVSELVTTAWASASTFRGSDKRGGANGARIRLAPQKDWEVNQPAQLNKVLRILEAIQDDLDHKISLADLIVLGGSAAVEKAARDAGFDIKVPFAPGRGDATQEQTDAESFAVLEPVADGFRNYQKKQYSVSAAELLVDKAQLLNLTAPEMTVLIGGLRVLGTNFGGTKHGVFTDRVGTLTNDFFVNLLDMGVQWKPVDAVVYEGRDRKTGEVVRTATVADLVFGSNSVLRAIAEVYAQDDNQEKFVRDFIAAWVKVMNADRFDLKAKA

Annotated regions:
phrase: GPFFIRMAWHSAGT
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: ISWADLMILTGNVAIES
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: GGKTFGFGGGRA
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: TVALVAGGHTFGKAH
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: WTANPTQWDNGFFDA
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: AFARAWFKLTHRDMGPRARYLGPEVPRELLIWQDPIPAGNGDFTDAEIENIKTLILDSGLTVSELVTTAWASASTFRGSDKRGGANGARIRLAPQKDWEVNQPAQLNKVLRILEAIQDDLDHKISLADLIVLGGSAAVEKAARDAGFDIKVPFAPGRGDATQEQTDAESFAVLEPVADGFRNYQKKQYSVSAAELLVDKAQLLNLTAPEMTVLIGGLRVLGTNFGGTKHGVFTDRVGTLTNDFFVNLLDMGVQWKPVDAVVYEGRDRKTGEVVRTATVADLVFGSNSVLRAIAEVYAQ
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: ADYGHYGPFFIRMAWHSAGTYRTGDGRGGAGSGTQRFAPLNSWPDNGNLDKARRLLWPIKQKYGNKISWADLMILTGNVAIESMGGKTFGFGGGRADVWHPEEDIYWGAEKEWLGDKRYTGERDLDNPLAAVQMGLIYVNPEGPNGKPDPLASARDIRETFKRMGMNDEETVALVAGGHTFGKAHGAGDPVHVGAEPEGASIEAQGLGWLSTHGSGKGRDTITSGIEGAWTANPTQWDNGFFDALFGYEWELTKSPAGAHQWAPINPADEHLAPDAEDSSIRVKTIMTTADMALRVDPEYEKISRRFHA
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: LDKARRLLWPIKQKYGNKISWADLMILTGNVAIESMGGKTFGFGGGRADVWHPEEDIYWGAEKEWLGDKRYTGERDLDNPLAAVQMGLIYVNPEGPNGKPDPLASARDIRETFKRMGMNDEETVALVAGGHTFGKAHGAGDPVHVGAEPEGASIEAQGLGWLSTHGSGKGRDTITSGIEGAWTANPTQWDNGFFDALFGYEWELTKSPAGAHQWAPINPADEHLAPDAEDSSIRVKTIMTTADMALRVDPEYEKISRRFHANPEEFADAFARAWFKLTHRDMGPRARYLGPEVP
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: TVALVAGGHT
type: BINDING_SITE
name: Peroxidases_heam-ligand_BS
description: Peroxidases heam-ligand binding site

phrase: GPFFIRMAWHS
type: ACTIVE_SITE
name: Peroxidases_AS
description: Peroxidase, active site
Protein sequence:
MIKSALLVLEDGTQFHGRAIGAEGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNASDEESSAVHAQGLVIRDLPLIASNYRNEEGLSEYLKRHNIVAIADIDTRKLTRLLREKGAQNGCIIVGELSDAALALEKAKAFPGLKGMDLAKEVTTKEMYQWLQGSWTLEGDLPAAKQPEDLPFHVVAYDYGVKRNILRMLVDRGCRLTVVPAQTPAEDVLKLNPDGIFLSNGPGDPEPCDYAITAIKRFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDLDASCVMITAQNHGFAVDETSLPSNLRTTHVSLFDGSLQGLHRTDKAAFSFQGHPEASPGPHDAAPLFDHFIELIEAYRASSVSLNCSNSHK

Annotated regions:
phrase: VVAYDYGVKRNILRMLVDRGCRLTVVPAQTPAEDVLKLNPDGIFLSNGPGDPEPCDYAITAIKRFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDLDASCVMITAQNHGFAVDETSLPSNLRTTHVSLFDGSLQGLHRTDKAAFSFQGHPEASPGPHDAAPLFDHF
type: DOMAIN
name: CPSase_GATase1
description: Carbamoyl-phosphate synthase small subunit, GATase1 domain

phrase: KSALLVLEDGTQFHGRAIGAEGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNASDEESSAVHAQGLVIRDLPLIASNYRNEEGLSEYLKRHNIVAIADIDTRKLTRLLREKGAQNGCI
type: DOMAIN
name: CarbamoylP_synth_ssu_N
description: Carbamoyl-phosphate synthase small subunit, N-terminal domain

phrase: AYDYGVKRNILRMLVDRGCRLTVVPAQTPAEDVLKLNPDGIFLSNGPGDPEPCDYAITAIKRFLETDIPVFGICLGHQLLALASGAKTVKMKFGHHGGNHPVKDLDASCVMITAQNHGFAVDETSLPSNLRTTHVSLFDGSLQGLHRTDKAAFSFQGHPEASPGPHDAAPLFDHFI
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: LVLEDGTQFHGRAIGAEGTAVGEVVFNTSMTGYQEILTDPSYSRQIVTLTYPHIGNVGTNASDEESSAVHAQGLVIRDLPLIASNYRNEEGLSEYLKRHNIVAIADIDTRKLTRLLREKGAQNGC
type: DOMAIN
name: CarbamoylP_synth_ssu_N
description: Carbamoyl-phosphate synthase small subunit, N-terminal domain
Protein sequence:
MENLIGYVAAFLTTVSFLPQVLRVVMTKQTRDISRNMYIMFFLGVVLWFVYGILRSDLPIILANVVTLFFVTIILYYKLTEGNQT

Annotated regions:
phrase: NLIGYVAAFLTTVSFLPQVLRVVMTKQTRDISRNMYIMFFLGVVLWFVYGILRSDL
type: REPEAT
name: PQ-loop_rpt
description: PQ-loop repeat
Protein sequence:
MKDQRLLDSVPLPNDPDRSLRPQVLDDFIGQEAARANLKIFIEAAKARQEALDHVLFVGPPGLGKTTLSQIMAKELGVNFRSTSGPVIAKSGDLAALLTNLEERDVLFIDEIHRLNPAIEEILYPAMEDYQLDLILGEGPAARSVKIDLAKFTLVAATTRLGLLTTPLRDRFGIPIRLNFYTIEELEYIVQRNARLFSVQISDDGAHEIARRARGTPRIAGRLLRRVCDFALVKRAKKIDRKVADEALSRLEVDHLGLDPLDRRYLLLIAETFLGGPVGIETIAAALSEPRDAIEDIIEPYLLQQGFIQRTARGRILREKAWNHLGLCAPASTISTQKCAQLLNTQDNSSGQTTLWDEADE

Annotated regions:
phrase: YTIEELEYIVQRNARLFSVQISDDGAHEIARRARGTPRIAGRLLRRVCDFALVKRAKKIDRKVADEALSRLEV
type: DOMAIN
name: AAA_lid_4
description: RuvB, AAA lid domain

phrase: LRPQVLDDFIGQEAARANLKIFIEAAKARQEALDHVLFVGPPGLGKTTLSQIMAKELGVNFRSTSGPVIAKSGDLAALLTNLEERDVLFIDEIHRLNPAIEEILYPAMEDYQLDLILGEGPAARSVKIDLAKFTLVAATTRLGLLTTPLRDRFGIPIR
type: DOMAIN
name: RuvB-like_N
description: RuvB-like P-loop domain

phrase: ALDHVLFVGPPGLGKTTLSQIMAKELGVNFRSTSGPVIAKSGDLAALLTNLEERDVLFIDEIHRLNPAIEEILYPAMEDYQLDLILGEGPAARSVKIDLAKFTLVAATTRLGLLTTPLRDRFGIPIRLNFY
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LGLDPLDRRYLLLIAETFLGGPVGIETIAAALSEPRDAIEDIIEPYLLQQGFIQRTARGRILREKAWNH
type: DOMAIN
name: RuvB_C
description: RuvB C-terminal winged helix domain