nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MYPVDLHMHTVASTHAYSTLHDYIAQARLKGIKLFAITDHGPDMADAPHYWHFVNMRIWPRLVDGVGILRGIEANIKNTDGEIDCTGPMLTSLDMIIAGFHEPVFPPQDKDTHTQAMIATIASGNVHIISHPGNPKFPIDIQAVAQAAAKHRVALEINNSSFTHSRMGSEANCRAVAAAVRDAGGMVALGSDSHTAFTLGEFTECRKVLDEVGFPEERILNVTPRRMLDFLESLGMPHIPEFADL

Annotated regions:
phrase: VDLHMHTVASTHAYSTLHDYIAQARLKGIKLFAITDHGPDMADAPHYWHFVNMRIWPRLVDGVGILRGIEANIK
type: DOMAIN
name: Pol/His_phosphatase_N
description: Polymerase/histidinol phosphatase, N-terminal

phrase: DLHMHTVASTHAYSTLHDYIAQARLKGIKLFAITDHGPDMADAPHYWHFVNMRIWPRLVDGVGILRGIEANIKNT
type: DOMAIN
name: PHP_dom
description: PHP domain
Protein sequence:
MSNQNRSFTVAVVGATGAVGETMLSILAERDFPVGKLVLLASARSAGTQVEFKGQKVDVLDLETFDPTGVDIALFSAGGGVSKEYAPKFAAAGAVVIDNSSTFRYDADVPLVVSEVNPHAAKNRPRGIIANPNCSTMQLMPVLAPIHRKYGIERINVATYQSVSGAGRSGLEELGRQTAQLLAFQEIEPKKFQAQIAFNLIPHIDEFLPNGYTKEEMKLVWETRKILEDDSIQVNPTAVRVPVFYGHSEAVNIETKEKITPEQARELLRAAPGVEVVDEHKAGGYPTPVTHASGRDPVFVGRIREDFSHPRGLNLWVVADNIRKGAALNAVQVAELVANGG

Annotated regions:
phrase: TVAVVGATGAVGETMLSILAERDFPVGKLVLLASARSAGTQVEFKGQKVDVLDLETFDPTGVDIALFSAGGGVSKEYAPKFAAAGAVVIDNSSTFRYDADVPLVVSEVNPHAAKN
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: TVAVVGATGAVGETMLSILAERDFPVGKLVLLASARSAGTQVEFKGQKVDVLDLETFDPTGVDIALFSAGGGVSKEYAPKFAAAGAVVIDNSSTFRYDADVPLVVSEVNPHAAK
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: LAPIHRKYGIERINVATYQSVSGAGRSGLEELGRQTAQLLAFQEIEPKKFQAQIAFNLIPHIDEFLPNGYTKEEMKLVWETRKILEDDSIQVNPTAVRVPVFYGHSEAVNIETKEKITPEQARELLRAAPGVEVVDEHKAGGYPTPVTHASGRDPVFVGRIREDFSHPRGLNLWVVADNIR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain
Protein sequence:
MGGHSHWAGIKHKKALLDSKRGKVFTRIIREITIAAKMGGAELENNPRLRKAVEDAKAANMPADNIKRAIMKGTGQLEGATYEEITYEGYGPSSIAVIVDCTTDNKNRTFSEIRKIFTSRGGSIGTTGCVSYMFKKKGLIIINKETISEESLMDIAIEAGADDIKSESEVHEVFTAPESLDIVKKALEEKGVKTESATLTMIPDTETEITDENAAQSIMKMMDELDDHDDTKAVYSNYNIPDEIMEKISK

Annotated regions:
phrase: YEEITYEGYGPSSIAVIVDCTTDNKNRTFSEIRKIFTSRGGSIGTTGCVSYMFKKKGLIIINKETISEESLMDIAIEAGADDIKSESEVHEVFTAPESLDIVKKALEEKGVKTESATLTMIPDTETEITDENAAQSIMKMMDELDDHDDTKAVYSN
type: DOMAIN
name: TACO1_YebC-like_2nd/3rd_dom
description: TACO1/YebC-like, second and third domains

phrase: SHWAGIKHKKALLDSKRGKVFTRIIREITIAAKMGGAELENNPRLRKAVEDAKAANMPADNIKRAIMKGTG
type: DOMAIN
name: TACO1_YebC_N
description: TACO1/YebC-like, N-terminal domain
Protein sequence:
MLVPLTLIGLISSRRMQDQEISYTRFREELERTNIEKVTIVEREAKGMLKQPGELVLDDRVVTFTKFKTYIPFDDPDLANELVAQDVDVSAKPAINWIQMVWTYLPWIALLAIWFFFIRQMQSGPNRAFTFGKSRARVYGEDRPSVTFKDVAGAEEAKQELREVIDFLKSPRKYERLGGKIPKGVLLLGPPGTGKTLLARAVAGEARVPFFFISGSGFVEMFVGVGASRVRDMFEQAKRNKPSIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLAEMDGFESDEHVILLAATNRPDVLDPALLRPGRFDRQVVVDRPDVKEREGILKVHTRKIPLAEDVDLALLARGTPGFSGADIANMVNEAALLAARLNRNKVARADFENAKDKILLGVERRSLLISEEEKKSTAYHESGHVLVSRMIPGTDPIHKVTIIPRGRALGVTQPLPIDERRTYSKEYCLNLLAFLLGGRAAEMAIMGQLTTGSGDDIEKATELARKMVCDWGMSEELGPLTFGKKEEEIFLGREIVQHRDYSEQTAVLIDKEVRRIVETQQKRAEQIVRDNIERLHRLAEALLEREILDGAEIDAVLEGRPIEARVDVAQAESEAVQTDAGREQVAEEKDRKGILPGRMEEAPSGA

Annotated regions:
phrase: VILLAATNRPDVLDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: VLLLGPPGTGKTLLARAVAGEARVPFFFISGSGFVEMFVGVGASRVRDMFEQAKRNKPSIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLAEMDGFESDEHVILLAATNRPDVLDPALLRPGRFDRQVVV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: IPKGVLLLGPPGTGKTLLARAVAGEARVPFFFISGSGFVEMFVGVGASRVRDMFEQAKRNKPSIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLAEMDGFESDEHVILLAATNRPDVLDPALLRPGRFDRQVVVDRP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LVPLTLIGLISSRRMQDQEISYTRFREELERTNIEKVTIVEREAKGMLKQPGELVLDDRVVTFTKFKTYIPFDDPDLANELVAQDVDVSAK
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular

phrase: DVDLALLARGTPGFSGADIANMVNEAALLAARLNRNKVARADF
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: LISEEEKKSTAYHESGHVLVSRMIPGTDPIHKVTIIPRGRALGVTQPLPIDERRTYSKEYCLNLLAFLLGGRAAEMAIMGQLTTGSGDDIEKATELARKMVCDWGMSEELGPLTFGKKEEEIFLGREIVQHRDYSEQTAVLIDKEVRRIVETQQKRAEQIVRDNIERLHRLAEALLEREILDGAEID
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41
Protein sequence:
MTAKYAIILAAGQGTRMKSKLYKVLHPVCGKPMVDHVLTEIEKNDMQEVVTIVGHGAQKVKETLGDRTEYALQAEQLGTGHAVLQAESILGQKDGMTIIACGDTPLFTAKTFEELFEYHKQKGAVATVLTAHTDNPFGYGRIIRNEIGIVEKIVEQKDATEKEAAVKEINTGVYCFDNRELFKALHGIKNDNAQGEYYLPDVMEIFQKEGKVVAAYQMKDFEESMGVNDRIALSKATKVMQRRINENLMRQGVTLIDPENTYIDIDVKVGADTVIEPGVYLKGKTVIGEDCFIGANSQIVDSVIENNVTVTSSMIEESIMHEGSDVGPNGHLRPLAEIGKNAHIGNFVEVKKAQIGENTKVGHLSYVGDATLGRNINVGCGTVFVNYDGMNKHHTNVGDYSFIGSGSNIVAPVNIADHAYVAAGSTITNDIDAHDMGIARGRQINKKGYFDKYPVADAAKKAEEKNK

Annotated regions:
phrase: IGSGSNIVAPVNIADHAYVAAGSTITND
type: CONSERVED_SITE
name: Hexapep_transf_CS
description: Hexapeptide transferase, conserved site

phrase: DVKVGADTVIEPGVYLKGKTVIGEDCFIGANSQ
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: AIILAAGQGTRMKSKLYKVLHPVCGKPMVDHVLTEIEKNDMQEVVTIVGHGAQKVKETLGDRTEYALQAEQLGTGHAVLQAESILGQKDGMTIIACGDTPLFTAKTFEELFEYHKQKGAVATVLTAHTDNPFGYGRIIRNEIGIVEKIVEQKDATEKEAAVKEINTGVYCFDNRELFKALHGIKNDNAQGEYYLPDVMEIFQKEGKVVAAYQMK
type: DOMAIN
name: NTP_transferase_dom
description: Nucleotidyl transferase domain

phrase: GVTLIDPENTYIDIDVKVGADTVIEPGVYLKGKTVIGEDCFIGANSQIVDSVIENNVTVTSSMIEESIMHEGSDVGPNGHLRPLAEIGKNAHIGNFVEVKKAQIGENTKVGHLSYVGDATLGRNINVGCGTVFVNYDGMNKHHTNVGDYSFIGSGSNIVAPVNIADHAYVAAGSTITNDIDAHDMGIARGR
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain

phrase: VGDYSFIGSGSNIVAPVNIADHAYVAAGSTI
type: REPEAT
name: Hexapep
description: Hexapeptide repeat
Protein sequence:
MQDKDNKELQQEVQNVDRRRFMGKSALLGAGAVAAPMTAAMFASMAKAQAKEAGNSAVVHPGELDEYYGFWSGGHSGEVRILGIPSMRELMRIPVFNVDSATGWGITNESKRIKGDSAHLLAGDSHHPHMSMTDGSYNGKYVFINDKANTRVARIRCDVMKTDKMLTVPNVQAIHGLRVQKVPYTKYIICNGEFEIPMNNDGKASLEDVSTYRSLFNVIDAESMEVAFQVMVDGNLDNTDADFDGKYFASTCYNSEMGMNLGEMITAERDHVVVFNLARCEAAVKAGKFKTYNSNKIPVLDGRKGSELTRYIPVPKSPHGLNTSPSGQYFVANGKLSPTVSIIAIDKLDDLFNDKIKPRDTIVAEPELGLGPLHTAFDNRGNAYTTLFLDSQIAKWNVEDAIRAHNGEKVNYLRQKLDVHYQPGHNHTSQGESRDADGKWLISLCKFSKDRFLPVGPLRPENDQLIDISGDEMKLVHDGPTFAEPHDCMIVHRSKVKPKKLWTRDDPIFADTVTMAKKDGVTLETDNKVIREGNKVRVYMTSIAPNFGMNEFKVKLGDEVTVVVTNLDQVEDVTHGFCMTNHGVQMEVGPQATSSVTFIANQPGVQWYYCNWFCHALHMEMRGRMLVEA

Annotated regions:
phrase: MQDKDNKELQQEVQNVDRRRFMGKSALLGAGAVAAPMTAAMFASMAKAQ
type: CONSERVED_SITE
name: TAT_signal
description: Twin-arginine translocation pathway, signal sequence

phrase: VPNVQAIHGLRVQKVPYTKYIICNGEFEIPMNNDGKASLEDVSTYRSLFNVIDAESMEVAFQVMVDGNLD
type: REPEAT
name: NOS_propeller_2
description: Nitrous oxide reductase, propeller repeat 2

phrase: KLDVHYQPGHNHTSQGESRDADGKWLISLCKFSKDRFLPVGPLRPENDQLIDISGDEMKLVHDGPTFAEP
type: REPEAT
name: Nos_propeller
description: Nitrous oxide reductase, propeller repeat 1

phrase: REGNKVRVYMTSIAPNFGMNEFKVKLGDEVTVVVTNLDQVEDVTHGFCMTNHGVQMEVGPQATSSVTFIANQPGVQWYYCNWFCHALHMEMRGRMLVE
type: DOMAIN
name: CcO_II-like_C
description: Cytochrome c oxidase subunit II-like C-terminal

phrase: KVRVYMTSIAPNFGMNEFKVKLGDEVTVVVTNLDQVEDVTHGFCMTNHGVQMEVGPQATSSVTFIANQPGVQWYYCNWFCHALHMEMRGRMLV
type: DOMAIN
name: N2OR_C
description: Nitrous-oxide reductase, C-terminal

phrase: VTHGFCMTNHGVQMEVGPQATSSVTFIANQPGVQWYYCNWFCHALHME
type: BINDING_SITE
name: Copper_CuA
description: Copper centre Cu(A)
Protein sequence:
MVRAARRKRASEDDLYRGCRMGQDCPIDIKNKYEHNTLADRILKWVSSFLYFGQLGISSGKGTGGSTGYTPLGGRGGGGVTSGKGANVVRPTVIVDALGPTGVPIDPAVPDSSIVPLLESSGGSTTLDATPGAEIEIIAEVHPPPVYEGPEVTIGDIEEPPILEVVPETHPTSRVRSTTSKHDNPAFTAYVASAQLPGETSASDNVYILHGFNGDFVGQADPEGDTIFEEIPLEEFGVPDMPPSTSTPTSSFRSVLNKFQRRLYNRKLVQQVKITNRNTFLKQPSQFVQWEFDNPAYVDDSLSLIFQQDLDEVSAAPDADFQDIVKLSRPVFTTKEGLVRLSRLGQRGTIKTRMACK

Annotated regions:
Protein sequence:
MAPVKSQESINQKLALVIKSGKYTLGYKSTVKSLRQGKSKLIIIAANTPVLRKSELEYYAMLSKTKVYYFQGGNNELGTAVGKLFRVGVVSILEAGDSDILTTLA

Annotated regions:
phrase: ELGTAVGKLFRVGVVSILEA
type: CONSERVED_SITE
name: Ribosomal_eL30_CS
description: Large ribosomal subunit protein eL30, conserved site

phrase: SINQKLALVIKSGKYTLGYKSTVKSLRQGKSKLIIIAANTPVLRKSELEYYAMLSKTKVYYFQGGNNELGTAVGKLFRVGVVSILEAGDSDI
type: DOMAIN
name: Ribosomal_eL8/eL30/eS12/Gad45
description: Ribosomal protein eL8/eL30/eS12/Gadd45

phrase: SGKYTLGYKSTVKSLRQGKSKLII
type: CONSERVED_SITE
name: Ribosomal_eL30_CS
description: Large ribosomal subunit protein eL30, conserved site
Protein sequence:
MNLEIYLTGKVKTKFILEGVEQYLKWIRPYHKIKITSFPLAGSTSANRDQIKKKEGERYLKALQNEKNVVVLHERGEELSSMEFATFIKKWQNSGTRKLIFIIGGPLGFSDNVLSQNWKKLSLSRMTFTHEMALLVLLEQLYRAETINRGMIYHY

Annotated regions:
Protein sequence:
MRAVVQRISEGKVVVDDAVTGAIKKGLLVFLGVTKEDTMEDVQYMAEKIVNLRIFEDQEEKMNLSVKDVGGKILAVSQFTLLGDCRKGRRPSFTEAARPETADKLYEAFIEQCEKLDIKVEKGVFQAHMMVHLVNDGPVTMLIDSKKVF

Annotated regions:
Protein sequence:
MAQKFDVCVLGATGLVGKTIIEILEQRDFPINKLYPLASSRSAGEIIEFNGESIEVIDADTFDFSLAQIGFFSAGGNISAKFAPLAADAGCIVIDNTSEFRYDDDIPLVIPEVNPHALAEYRNRNIIANPNCSTIQMLVALKPIHEAVGIERINVCTYQSVSGAGKEAMDELAKQCANLLSGKPVDPKVFSRQIAFNVIPQIDAFQDNGYTKEEMKMVWETNKILGDNTIRVNPTAVRVPVFFGHGEAVHIETRSPISAEEVKALLREAPGVEVCEKDEDFPTQIGEASGVDATFVGRIREDISHNNGINMWIVADNVRKGAATNSIQIAELLIKEHLS

Annotated regions:
phrase: LKPIHEAVGIERINVCTYQSVSGAGKEAMDELAKQCANLLSGKPVDPKVFSRQIAFNVIPQIDAFQDNGYTKEEMKMVWETNKILGDNTIRVNPTAVRVPVFFGHGEAVHIETRSPISAEEVKALLREAPGVEVCEKDEDFPTQIGEASGVDATFVGRIREDISHNNGINMWIVADNVR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: VCVLGATGLVGKTIIEILEQRDFPINKLYPLASSRSAGEIIEFNGESIEVIDADTFDFSLAQIGFFSAGGNISAKFAPLAADAGCIVIDNTSEFRYDDDIPLVIPEVNPHALA
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: DVCVLGATGLVGKTIIEILEQRDFPINKLYPLASSRSAGEIIEFNGESIEVIDADTFDFSLAQIGFFSAGGNISAKFAPLAADAGCIVIDNTSEFRYDDDIPLVIPEVNPHALAE
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MSTTNILLLCGGGGDEHAISLLSANYFETSLATLPQFNVLRVELDVNGHYRTAAGESCELNSRRQIRFDADNRAPWEVDFAIPCIHGFPGETGDIQSYFELINLPYFGCKAEASRNCFNKITAKMWFSALNIPNTPYLFLNEMSDVSIEQATNALVNWGSIFVKAASQGSSVGCYRIDNQEDVASTLAQAFTYSDYVIVEKTISARELEVAVYEIDGEIVATVPGEVICSSNNFYTFDEKYAANSKAQTQVVADISKEVSDLIRQYAISAFKGMKLRHLSRIDFFLTDDGEVLLNEINTFPGLTPISMFPKMLQNHGHSFPDYLLSNINSTD

Annotated regions:
phrase: SALNIPNTPYLFLNEMSDVSIEQATNALVNWGSIFVKAASQGSSVGCYRIDNQEDVASTLAQAFTYSDYVIVEKTISARELEVAVYEIDGEIVATVPGEVICSSNNFYTFDEKYAANSKAQTQVVADISKEVSDLIRQYAISAFKGMKLRHLSRIDFFLTDDGEVLLNEINTFPGLTPISMFPKMLQNHGHSFPD
type: DOMAIN
name: Dala_Dala_lig_C
description: D-alanine--D-alanine ligase, C-terminal

phrase: NILLLCGGGGDEHAISLLSANYFETSLATLPQFNVLRVELDVNGHYRTAAGESCELNSRRQIRFDADNRAPWEVDFAIPCIHGFPGETGDIQSYFELINLPYFG
type: DOMAIN
name: Dala_Dala_lig_N
description: D-alanine--D-alanine ligase, N-terminal domain

phrase: KMWFSALNIPNTPYLFLNEMSDVSIEQATNALVNWGSIFVKAASQGSSVGCYRIDNQEDVASTLAQAFTYSDYVIVEKTISARELEVAVYEIDGEIVATVPGEVICSSNNFYTFDEKYAANSKAQTQVVADISKEVSDLIRQYAISAFKGMKLRHLSRIDFFLTDDGEVLLNEINTFPGLTPISMFPKMLQNHGHSFPDYLLSNI
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold

phrase: HGFPGETGDIQ
type: CONSERVED_SITE
name: D-Ala_lig_Van_CS
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site

phrase: MKLRHLSRIDFFLTDDGEVLLNEINTFP
type: CONSERVED_SITE
name: D-Ala_lig_Van_CS
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site
Protein sequence:
MSLLSKTRELNTLLQKHKGIAVDFKDVARKISEVTVTNVFIVSRRGKILGHSLNELLKSNRINQMLEDRHIPSEYTDKLIDVKQTVSNIGIDDDLSVFPPENRDTFIDSKTTIFPVLGGGERLGTLVLGRVSDDFTDNDLVLGEYAATVLGMEILREKHSEVEQEARDKAAINMAINSLSYSEREAIEHIFEELGGKEGLLIASKVADRVGITRSVIVNALRKLESAGVIESRSLGMKGTFIKVKKEQFLDELEKSN

Annotated regions:
phrase: EGLLIASKVADRVGITRSVIVNALRKLESAGVIESRSLGMKGTFIKVKKEQFLDELE
type: DOMAIN
name: GTP_trans_reg_CodY_C
description: Global transcriptional regulator CodY, C-terminal

phrase: SLLSKTRELNTLLQKHKGIAVDFKDVARKISEVTVTNVFIVSRRGKILGHSLNELLKSNRINQMLEDRHIPSEYTDKLIDVKQTVSNIGIDDDLSVFPPENRDTFIDSKTTIFPVLGGGERLGTLVLGRVSDDFTDNDLVLGEYAATVLGMEILREKHSEVEQEARDKAAINMAIN
type: DOMAIN
name: Transc_reg_CodY_N
description: Global transcriptional regulator CodY, N-terminal
Protein sequence:
MSGIGPDQALSIAAIATAVAPGQGGIAVIRLSGPSAVRAVAAITVIPGQQVWESHRVLYGHVVAAGGVERLDEVLVLVMLAPRSFTGEDVVEIHCHGGVIAVQQVLARVLEQPGVRRALPGEFSQRAVLNGRLDLTRAEAIGDLVGARSQRAAQLAMAGLDGGIQKKMVVLRERLLDQLSELEARVDFEEDLPPLNGEALLQELQAVRLELLTLVADGERGSVVRHGLRVALVGRPNVGKSSLLNLLSRRERAIVTDLPGTTRDLLESEIVLDGVPITLLDTAGIRATSNAVEKLGIARSRDALASADLVLLLFDLAQGWSDDDQALFALIPEGVPCLRVGNKADLPLKAEPVAETVAASVADVRLSAVTGDGEQALVQAVLERCGALGEQPLLLALNQRQSDLAVTAAEALARSEQVAADGLPWDFWTIDLRQAIRSLGEITGEQLTESVLDRIFSRFCIGK

Annotated regions:
phrase: IAAIATAVAPGQGGIAVIRLSGPSAVRAVAAITVIPGQQVWESHRVLYGHVVAAGGVERLDEVLVLVMLAPRSFTGEDVVEIHCHGGVIAVQQVLARVLEQPGVRRALPGEFSQRAVLNG
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal

phrase: LTRAEAIGDLVGARSQRAAQLAMAGLDGGIQKKMVVLRERLLDQLSELEARVDFEEDLPPLNGEALLQELQAVRLELLTLVADGERGSVVRHGLRVALVGRPNVGKSSLLNLLSRRERAIVTDLPGTTRDLLESEIVLDGVPITLLDTAGIRATSNAVEKLGIARSRDALASADLVLLLFDLAQGWSDDDQALFALIPEGVPCLRVGNKADLPLKAEPVAETVAASVADVRLSAVTGDGEQALVQAVLERCGALGEQPLLLALNQRQSDLAVTAAEALARSEQVAADGLPWDFWTIDLRQAIRSLGEITGEQLTESVLDRIFSRF
type: DOMAIN
name: MnmE_helical
description: MnmE, helical domain

phrase: RVALVGRPNVGKSSLLNLLSRRERAIVTDLPGTTRDLLESEIVLDGVPITLLDTAGIRATSNAVEKLGIARSRDALASADLVLLLFDLAQGWSDDDQALFALIPEGVPCLRVGNKADLPLKAEPVAETVAASVADVRLSAVTGDGEQALV
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: IAAIATAVAPGQGGIAVIRLSGPSAVRAVAAITVIPGQQVWESHRVLYGHVVAAGGVERLDEVLVLVMLAPRSFTGEDVVEIHCHGGVIAVQQVLARVLEQPGVRRALPGEFSQRAVLN
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal

phrase: RVALVGRPNVGKSSLLNLLSRRERAIVTDLPGTTRDLLESEIVLDGVPITLLDTAGIRATSNAVEKLGIARSRDALASADLVLLLFDLAQGWSDDDQALFALIPEGVPCLRVGN
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: RHGLRVALVGRPNVGKSSLLNLLSRRERAIVTDLPGTTRDLLESEIVLDGVPITLLDTAGIRATSNAVEKLGIARSRDALASADLVLLLFDLAQGWSDDDQALFALIPEGVPCLRVGNKADLPLKAEPVAETVAASVADVRLSAVTGDGEQALVQAVLERC
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain

phrase: GLRVALVGRPNVGKSSLLNLLSRRERAIVTDLPGTTRDLLESEIVLDGVPITLLDTAGIRATSNAVEKLGIARSRDALASADLVLLLFDLAQGWSDDDQALFALIPEGVPCLRVGNKADLPLKAEPVAETVAASVADVRLSAVTGDGEQALVQAVLERC
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain
Protein sequence:
MNGNSIIGLIGHPVSHSIGQILYNRIFQDMGIDAFYLAMDVHMNVLPAFLKNSFFLKAFNVTIPHKVSIIPFLDDLDEIASQTRSVNLVIREQSRMKGYNTDYYGLDYALSFNQVEIEEKRIVIAGSGGIARTVIRYMLDHGAHRVDVLTRNAQNARRNLDIPGIGLHENIDEDYDIYVNCTPLGTLGDGDPFSTVDFRSGRTGIDLVYNPPDTPFLKRMRNAGGRTVSGLDVFIGQGLRTLELVFGIRPDSIFREYAVEALNEIRKG

Annotated regions:
phrase: LIGHPVSHSIGQILYNRIFQDMGIDAFYLAMDVHMNVLPAFLKNSFFLKAFNVTIPHKVSIIPFLDDLDEIASQTRSVNL
type: DOMAIN
name: Shikimate_DH-bd_N
description: Shikimate dehydrogenase substrate binding, N-terminal
Protein sequence:
MLLSELITYVTDARVVNPGDADITGIAYDSRDVKPGWLFVAMQGGTFDGHKFIGAALDAGAAAIIGEKKGDRHLFDSCSEKVSVTFYEVPNGRVAMGEIAAPFFGYPSRKMKLIGVTGTSGKTTVTHLVQSIFSAGGRPAGLVGTLGARIGDEFIETKHTTPESVDLQRTLAYMVERGVEAVAMEASSHGLYQGRTLGCEFDCGVFTNIARDHLDFHGTIEAYLDAKMMLFRDYPAMSAKSFVAAVNADDAAAAAVIAATKGDVITFAVDSPADLKASNVEVTDRSVRFDMAYSGASVPVRLDIGGFFNVYNALSAAAAAIGLGLDVDTVVRGLAAAHSVPGRFESVDCGQDFGVIVDYAHTPDELENVLRTAKSLTKNRLIAVFGCGGDRDRGKRPIMGGIGAELADLVVVTSDNPRSEDPDSIIEMVLEGIPDPEKSRATVRPDRREAIETAIGMAQAGDVVVIAGKGHEDYQIFADRTIHFDDREVAREVLTSAADIR

Annotated regions:
phrase: ITGIAYDSRDVKPGWLFVAMQGGTFDGHKFIGAALDAGAAAIIGEKKGDRHLFDSCSEKVSVTFYEVPNGRVAMGEIAAP
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: VTGTSGKTTVTHLVQSIFSAGGRPAGLVGTLGARIGDEFIETKHTTPESVDLQRTLAYMVERGVEAVAMEASSHGLYQGRTLGCEFDCGVFTNIARDHLDFHGTIEAYLDAKMMLFRDYPAMSAKSFVAAVNADDAAAAAVIAATKGDVITFAVDSPADLKASNVEVTDRSVRFDMAYSGASVPVRLDIGGFFNVYNALSAAAA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRFESVDCGQDFGVIVDYAHTPDELENVLRTAKSLTKNRLIAVFGCGGDRDRGKRPIMGGIGAELADLVVVTSDNPRSEDPDSIIEMVLEGIPDPEKSRATVRPDRREAIETAIGMAQAGDVVVIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MSQIFNFSSGPAMLPVEVLRRAEQELCNWRGLGTSVMEISHRSKEFIQVAEEAEKDFRDLLKIPSNYKVLFCHGGARGQFAAVPLNLLGQHGKADYVDGGYWAASAIKEAQKYCTPNVIDAKTTLNGLRAISPMNSWELSDDAAYVHFCPNETIDGIAIHETPDFGDKTVVADLSSTILSTPIDVSRYGVLYAGAQKNIGPAGLTLVVVREDLLGHARKELPSILDYTVLAENDSMFNTPPTFAWYLSGLVFKWLKEQGGVGELDKRNQAKADLLYGTIDSSDFYRNDVAVANRSRMNVPFQLADAALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLAGVKTLTDFMIDFERRHG

Annotated regions:
phrase: IFNFSSGPAMLPVEVLRRAEQELCNWRGLGTSVMEISHRSKEFIQVAEEAEKDFRDLLKIPSNYKVLFCHGGARGQFAAVPLNLLGQHGKADYVDGGYWAASAIKEAQKYCTPNVIDAKTTLNGLRAISPMNSWELSDDAAYVHFCPNETIDGIAIHETPDFGDKTVVADLSSTILSTPIDVSRYGVLYAGAQKNIGPAGLTLVVVREDLLGHARKELPSILDYTVLAENDSMFNTPPTFAWYLSGLVFKWLKEQGGVGELDKRNQAKADLLYGTIDSSDFYRNDVAVANRSRMNVPFQLADAALDKLFLEESFAAGLHALKGHRVVGGMRASIYNAMPLAGVKT
type: DOMAIN
name: Aminotrans_V_dom
description: Aminotransferase class V domain

phrase: YGVLYAGAQKNIGPAGLTL
type: BINDING_SITE
name: Aminotrans_V_PyrdxlP_BS
description: Aminotransferase class-V, pyridoxal-phosphate binding site
Protein sequence:
MIITTEKETILGNGSKSKAFSITASPKVFKILSSDLYTNKIRAVVRELITNMIDAHALNGNPEKFIIQVPGRLDPRFVCRDFGPGMSDFDIQGDDNSPGLYNSYFSSSKAESNDFIGGFGLGSKSPFSYTDTFSITSYHKGEIRGYVAYMDGDGPQIKPTFVKEMGPDDKTGIEIVVPVEEKDFRNFAYEVSYIMRPFKDLAIINGLDREIDYFPDFDDYYGVNPERYWPDRGGLYAIYGGIVYPIDGVIRDRNWLSIRNEVNYIKFPMGSLDIAPSREALSLDDRTRKNIIERVKELSEKAFNEDVKRFKESTSPRHTYRELMKMGYSARDYMISNSVKFTTKNLSYKKMQSMFEPDSKLCNAGVVYEVNLDPRLKRIKQSHETSAVASSYRLFGINTTKINIVIDNIKNRVNIVRGLARALDDSEFNNTLNIHHNERLLFINPEVESQIDLLPDIMAMFESDEVNIHYLSEIEALVKSYIPKVVKSKAPRPKAATAFKFEIKDGRWEKRNYLRLTSEADEITGYVAYMHRSDIFSMDGTTSLCHPSMNILIRMANLIGINEFYVIRPLLQKKVKELGQCQCIFEALRDLYVDAFDDVDYDKYVGYSSSAKRYIDKIIKYPELDFMMKYFSIDEVSEEYTRLANMVSSLQGVYFNGGKDTIGHDIWTVTNLFDVLSNNASKNSDKMVAEFTKKFRIVSDFIGYRNSLSDDEVSQIAKTMKALAA

Annotated regions:
Protein sequence:
MNMNADPAELQKFSELAHRWWDTTSEFKPLHEINPLRLDWIDRNAGLAGKRVLDIGCGGGILSESMAAAGAHVTGIDLSEKALGVARLHLFESGQKVDYHHASAEEFAAQHAGEFDIVTCMEMLEHVPDPASTVAACAQLVRPGGQVFFSTINRNFKAYLFAVLGAEYILKLLPRGTHDYVKFIRPSELARYCRQAGLETAELLGMSYNPLTQVYSLGNDTDVNYLVHAKQAVS

Annotated regions:
Protein sequence:
MGQKVNPIGLRLGVNRTWESRWYAGAGEYAKLLHEDIKIRKMLKERLKNASVSKIVIERPHKKCRVTVHTARPGVVIGKKGSDIETLRKELSKMIDGEVHLNLVEVRKPEIDAALVAESIAQQLERRVAFRRAMKRSMQSAMRMGAKGCKIVCGGRLGGAEIARTEQYNEGSVPLHTLRADIDYGTCEAKTAMGIIGIKVWIYKGEIMEHDPNAQERRLQESGEQRARSGRQAA

Annotated regions:
phrase: KIRKMLKERLKNASVSKIVIERPHKKCRVTVHTARPGVVIGKKGSDIETLRKELSKMIDGEVHLNLVEVRKP
type: DOMAIN
name: KH_dom_type_2
description: K Homology domain, type 2

phrase: IAQQLERRVAFRRAMKRSMQSAMRMGAKGCKIVCGGRLGGAEIARTEQYNEGSVPLHTLRADIDYGTCEAKTAMGIIGIKVW
type: DOMAIN
name: Ribosomal_uS3_C
description: Small ribosomal subunit protein uS3, C-terminal

phrase: ARTEQYNEGSVPLHTLRADIDYGTCEAKTAMGII
type: CONSERVED_SITE
name: Ribosomal_uS3_CS
description: Small ribosomal subunit protein uS3, conserved site

phrase: IRKMLKERLKNASVSKIVIERPHKKCRVTVHTARPGVVIGKKGSDIETLRKELSKMIDGEVHLNLVEV
type: DOMAIN
name: KH_dom_type_2
description: K Homology domain, type 2

phrase: PHKKCRVTVHTARPGVVIGKKGSDIETLRKELSKMIDGEVHLNLVEVRKPEIDAALVAESIAQQL
type: DOMAIN
name: KH_dom
description: K Homology domain
Protein sequence:
MAKKALIEKSNRKPKYAVRGYTRCQRCGRSRSVYRVFGLCRVCLRQMAHRGELPGITKSSW

Annotated regions:
phrase: RCQRCGRSRSVYRVFGLCRVCL
type: CONSERVED_SITE
name: Ribosomal_uS14_CS
description: Small ribosomal subunit protein uS14, conserved site
Protein sequence:
MNYSALITLAQKLIQQPSVSPNHHSCHEIIANYLEKLNFNVELMRFDNTLNLWAFHSCKKQQKHTTLLFIGHTDVVDPGDPQFWDYPPFSGLVHNNMLHGRGAIDMKGALAAMLVATANFIDQYPNYQGRIAFLITSDEEGSGINGTTKVVESLIARNEHINYCIVGEPSSQDQLGDVIKNGRRGSLTGQLTIHGSQGHVAYPQFSKNPIHLIIPALSDLLNITWDREKSILFPPTAIQITNIYSNHKNNNVTPHTVILNFNVRFNDKCSIDNIKRYINDIFTRHTLPYNINWKLSAEPYFSKPGQLTNVAINAIKYYQKFEPRLETTGGTSDGRFIAKMGTEVIELGARNHMIHKVNEYIDLIDLKLLSSIYKKIIEDLILIQ

Annotated regions:
phrase: LLFIGHTDV
type: CONSERVED_SITE
name: ArgE/DapE_CS
description: ArgE/DapE/ACY1/CPG2/YscS, conserved site

phrase: NGRRGSLTGQLTIHGSQGHVAYPQFSKNPIHLIIPALSDLLNITWDREKSILFPPTAIQITNIYSNHKNNNVTPHTVILNFNVRFNDKCSIDNIKRYINDIFTRHTLP
type: DOMAIN
name: Peptidase_M20_dimer
description: Peptidase M20, dimerisation domain

phrase: AIDMKGALAAMLVATANFIDQYPNYQGRIAFLITSDEEG
type: CONSERVED_SITE
name: ArgE/DapE_CS
description: ArgE/DapE/ACY1/CPG2/YscS, conserved site
Protein sequence:
MVTKPARMYTRITGPAYTRKEFMGGVPYPKITTFVQGNQKRDFPIEMQLIAMESCQVRHTALEAARVSVNRRMTEAAGLDNFYLKVVPYPHHVLREHKMATGAGADRISSGMRAAFGRPVGTAARVYQNDVIMIGRTDEAHAHELKIALKKAAIKLPTPCKVVITKGKEIAGAIGV

Annotated regions:
phrase: DFPIEMQLIAMESCQVRHTALEAARVSVNRRMTEAAGLDNFYLKVVPYPHHVLREHKMATGAGADRISSGMRAAFGRPVGTAARVYQNDVIMIGRTDEAHAHELKIALKKAAIKLPTPCKV
type: DOMAIN
name: Ribosomal_uL16_dom
description: Large ribosomal subunit protein uL16 domain

phrase: ADRISSGMRAAFGRPVGTAAR
type: CONSERVED_SITE
name: Ribosomal_uL16_CS_euk_arc
description: Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaea
Protein sequence:
MIEEKLKKQAAWAAIKYIKPGDIVGVGSGSTAEYFIDALGSIKNLIKGTVSSSRISSSKLKDLNIPLFDLNEVSLLNIYVDGADEINQKKHMIKGKGAALTREKIIASAAKKFICIVDSSKFVHVLGRAPLPIEVIPMARTLVSKKIIDIGGSPKYRKGIITENGNVLLDVHNLIILDSLFLEEKINNIPGVVSVGLFAHRAADIAIISGKNGIKIID

Annotated regions:
Protein sequence:
MARQFKVAVCGATGAVGNQMLQCLEERDFPVGELRLLASERSRGKTLTYKGQSIPVQVLGPDSFQGIQIALFSAGASTSKQFAPLAARAGAVVVDNSSCWRMDPAVPLVVPEVNPQDVAAYTNQGIIANPNCSTIQMVVALKPIHDLAGIERVVVSTYQAVSGTGQKAIFELEGQLKALHEGRAPEAKVYPYQIAGNLLPHIDVFQDNGYTKEEMKMVLETRKIMGDDSIKLSATCVRVPVRYSHSEAVNITTRKKITPEQVRAALAQAPGVKVVDDPAKLLYPTPLMAAGQDLTLVGRIREDISQERGIDLWVVADNIRKGAATNAVQIAEILAAKYL

Annotated regions:
phrase: LSATCVRVPVRYSH
type: CONSERVED_SITE
name: Asp-semialdehyde_DH_CS
description: Aspartate-semialdehyde dehydrogenase, conserved site

phrase: KVAVCGATGAVGNQMLQCLEERDFPVGELRLLASERSRGKTLTYKGQSIPVQVLGPDSFQGIQIALFSAGASTSKQFAPLAARAGAVVVDNSSCWRMDPAVPLVVPEVNPQDV
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: LKPIHDLAGIERVVVSTYQAVSGTGQKAIFELEGQLKALHEGRAPEAKVYPYQIAGNLLPHIDVFQDNGYTKEEMKMVLETRKIMGDDSIKLSATCVRVPVRYSHSEAVNITTRKKITPEQVRAALAQAPGVKVVDDPAKLLYPTPLMAAGQDLTLVGRIREDISQERGIDLWVVADNIR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: KVAVCGATGAVGNQMLQCLEERDFPVGELRLLASERSRGKTLTYKGQSIPVQVLGPDSFQGIQIALFSAGASTSKQFAPLAARAGAVVVDNSSCWRMDPAVPLVVPEVNPQDVAA
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MSRASETTHFGFQRVSLGQKQALVDHVFRNVAQRYDLMNDLMSCGLHRAWKDALITALNPPKDAGSFALLDLAGGTADIALRAAAAGGAGMRITVLDINPEMIELGQARATERGADIRFIAGNAETLPLATCSFDAVTIAFGIRNVSRIESALGEAYRVLRPGGHFLCLEFSAVDVPGLDGLYDFYSFNLIPTLGGAVTGDAQAYRYLVESIRRFPASETFAQMLRKVGFARVSFQRMTGGIVALHSGWRL

Annotated regions:
phrase: YDLMNDLMSCGLHRA
type: CONSERVED_SITE
name: UbiE/COQ5_MeTrFase_CS
description: UbiE/COQ5 methyltransferase, conserved site

phrase: RVLRPGGHFLCLEF
type: CONSERVED_SITE
name: UbiE/COQ5_MeTrFase_CS
description: UbiE/COQ5 methyltransferase, conserved site
Protein sequence:
MSLSTGTSPFSIHFMTTTHFGFESVDEQDKARRVRSVFDSVAPKYDVMNDLMSMGLHRAWKAYTVLVANVREGQQVLDIAGGTGDLALAFAPKVGATGRVVHTDINEAMLREGRNRLLDAGVCLPTLVCDAEKLPFPDASFDVVTVAFGLRNMTHKDLALKEMNRVLKPGGKLLVLEFSKVAKPLEKLYDWYSFKVLPRIGKLVANDDASYQYLAESIRMHPSQEELKTLMQNTGFGHVDYHNLSGGVVALHVGIKC

Annotated regions:
phrase: YDVMNDLMSMGLHRA
type: CONSERVED_SITE
name: UbiE/COQ5_MeTrFase_CS
description: UbiE/COQ5 methyltransferase, conserved site

phrase: RVLKPGGKLLVLEF
type: CONSERVED_SITE
name: UbiE/COQ5_MeTrFase_CS
description: UbiE/COQ5 methyltransferase, conserved site
Protein sequence:
MKSLNNKVGFSSLNISIVLLILMISLLARYLVSLNGYSGQSKPPMFGDYEAQRHWMEITTNLDIHQWYFNSTDNDLMYWGLDYPPLTAYLSWVFGKIGEFIEPKSMELFTSRGYETDSGKLFMRMTVIVSDLFIWLPSVWFFVKTFYKQRNISQQISAFLFISLQPGLLLIDHGHFQYNGVSLGLGLFAITFIIRDQQLLASFFFVLSLNYKQMCLYYSPAFFFYLLLSNFEFTLKFSKIFSSIFKILKIGIVVIFTFILCWIPFLSIEQASQVLFRLFPFARGLYEDKVANFWCFISIIINVKNLFTTDQLIKICLILTLVTMLPLVYGIKRIPKNKFVFIHSLINSSFSFFLFSFQVHEKTILLVSLPISLLILHHPNMVWWFILISTFSMFPLLFKDGLVIPYFAIMILYIVIGYQFKNSITRSNNQFKHQNSQENLLASSDKSFYSIYLNYWFYLNIIGMVVCHLLYQFAPHPPHLPSLWLLLVCNFSFIHFILTFFYFIKEMTTFSPIKIKSN

Annotated regions: