nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MHLDILKNADPEVYAAIQSELERQTDTLELIASENFTSRAVMEACGSVMTNKYAEGYPGKRFYGGCEFVDVAEDLARDRAKKLFSCEYANVQPHSGSSANMAVIFTFCKPGDTILGFDLSHGGHLTHGSPVNFSGQFYNAHFYGVEKETGRIDMNRVEEKAKEVKPKLIICGASAYSRDWEYAEFRRIADSVDAILMADIAHPAGLIATGLLNDPMPHCHVVTTTTHKTLRGPRGGMILMGKDFENPMGIKAKTKTGERIKMVSELLDAMVMPGIQGGPLMHVIAGKAVAFGEALNPEYKQYMEQVRKNAAAMAEQFISLGYDIISGGTDNHLMLIDLRNKDITGKKTENLLHEAGITVNKNMVPFDDKSPFVTSGFRVGAAAMTTREMKEAEAKTIVKFIDKVISNAGSENISAICQEVKEEVNALCQQFPLYDFVPAS

Annotated regions:
phrase: LKNADPEVYAAIQSELERQTDTLELIASENFTSRAVMEACGSVMTNKYAEGYPGKRFYGGCEFVDVAEDLARDRAKKLFSCEYANVQPHSGSSANMAVIFTFCKPGDTILGFDLSHGGHLTHGSPVNFSGQFYNAHFYGVEKETGRIDMNRVEEKAKEVKPKLIICGASAYSRDWEYAEFRRIADSVDAILMADIAHPAGLIATGLLNDPMPHCHVVTTTTHKTLRGPRGGMILMGKDFENPMGIKAKTKTGERIKMVSELLDAMVMPGIQGGPLMHVIAGKAVAFGEALNPEYKQYMEQVRKNAAAMAEQFISLGYDIISGGTDNHLMLIDLRNKDITGKKTENLLHEAGITVNKNMVPFDDKSPFVTSGFRVGAAAMTTREMKEAEAKTIVKF
type: DOMAIN
name: SHMT-like_dom
description: Serine hydroxymethyltransferase-like domain

phrase: HVVTTTTHKTLRGPRG
type: BINDING_SITE
name: Ser_HO-MeTrfase_PLP_BS
description: Serine hydroxymethyltransferase, pyridoxal phosphate binding site
Protein sequence:
MSSPPRGEVAARLEPVVAEAVSAAGFDLEELDVQQAGRRRLVKVVVDAEEGVGLDEISEISRAVSKVLDAHEHVLAGSYTLEVTSPGVDRPLTRPRHWRRARYRLVRVRLADGSDLVVRVGEADDEGVVVLADGEIRTLAYRDVERAVVEVEFQQPPAEDLVRLERAADGAPERGGDRGDTEESR

Annotated regions:
phrase: LTRPRHWRRARYRLVRVRLADGSDLVVRVGEADDEGVVVLADGEIRTLAYRDVERAVVEVE
type: DOMAIN
name: RimP_C
description: Ribosome maturation factor RimP, C-terminal

phrase: VAEAVSAAGFDLEELDVQQAGRRRLVKVVVDAEEGVGLDEISEISRAVSKVLDAHEHVLAGSYTLEVTSPGV
type: DOMAIN
name: RimP_N
description: Ribosome maturation factor RimP, N-terminal

phrase: GVDRPLTRPRHWRRARYRLVRVRLADGSDLVVRVGEADDEGVVVLADGEIRTLAYRDVERAVVEVE
type: DOMAIN
name: RimP_C
description: Ribosome maturation factor RimP, C-terminal
Protein sequence:
MSENYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCKDIVVTIHEDNSVSVSDDGRGIPTEMHPEEKVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSEKVVLTIHRGGHIHTQTYRHGEPEAPLAVVGDTDKTGTQIRFWPSAETFSNTEFHYDILAKRLRELSFLNSGVSIKLIDEREADKQDHFMYEGGIQAFVQHLNTNKTPIIEKIFHFDLEREDGISVEVAMQWNDGFQENIFCFTNNIPQRDGGTHLAGFRAALTRTLNSFMDKEGFSKKAKTATSGDDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEVKSAVESAMGEKLSEFLVENPSEAKMVCSKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQEKDPALSELYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGRDEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYVYIAQPPLYKVKKGKQEQYIKDEEAMNQYQVSLALDNASLHVNAEAPALAGEALEKLVQQYNAGIKLADRMSRRYPRALVHELIYTSRLTAEQCHDAAAVEAWTKQLVEQLNAKEVGASQYSYEVELHAELGLSLPKIIVRTHGVTHEHALSVDFLNSKEYGKLADLSEVLDGLLEEGAYIKRGERTLPVSSFAEALEWLVKESMRGLSRQRYKGLGEMNPDQLWETTMDPETRRMMQVTIEDAVGADQLFTTLMGDQVEPRRHFIEENALKVANLDV

Annotated regions:
phrase: IVEGDSAG
type: CONSERVED_SITE
name: TopoIIA_CS
description: DNA topoisomerase, type IIA, conserved site

phrase: SRQRYKGLGEMNPDQLWETTMDPETRRMMQVTIEDAVGADQLFTTLMGDQVEPRRHFI
type: DOMAIN
name: DNA_gyrase_B_C
description: DNA gyrase B subunit, C-terminal

phrase: PLYKVKKGKQEQYIKDEEAMNQYQVSLA
type: DOMAIN
name: GyrB_hook
description: DNA gyrase subunit B, hook

phrase: GIQAFVQHLNTNKTPIIEKIFHFDLEREDGISVEVAMQWNDGFQENIFCFTNNIPQRDGGTHLAGFRAALTRTLNSFMDKEGFSKKAKTATSGDDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEVKSAVESAMGEKLSEFLVENPSEAKMVCSKIIDAARAREAARKAR
type: DOMAIN
name: Topo_IIA_bsu_dom2
description: DNA topoisomerase, type IIA, subunit B, domain 2

phrase: ELYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGRDEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYVYIA
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: DGTGLHHMVFEVVDNSIDEALAGHCKDIVVTIHEDNSVSVSDDGRGIPTEMHPEEKVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSEKVVLTIHRGGHIHTQTYRHGEPEAPLAVVGDTDKTGTQIRFWP
type: DOMAIN
name: HATPase_dom
description: Histidine kinase/HSP90-like ATPase domain

phrase: ASLHVNAEAPALAGEALEKLVQQYNAGIKLADRMSRRYPRALVHELIYTSRLTAEQCHDAAAVEAWTKQLVEQLNAKEVGASQYSYEVELHAELGLSLPKIIVRTHGVTHEHALSVDFLNSKEYGKLADLSEVLDGLLEEGAYIKRGERTLPVSSFAEALEWLVK
type: DOMAIN
name: GyrB_insert
description: DNA gyrase subunit B insert domain

phrase: SELYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGRDEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYVYIAQP
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: DDGTGLHHMVFEVVDNSIDEALAGHCKDIVVTIHEDNSVSVSDDGRGIPTEMHPEEKVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSEKVVLTIHRGGHIHTQTYRHGEPEAPLAVVGDTDKTGTQIRFWPSAE
type: DOMAIN
name: HATPase_dom
description: Histidine kinase/HSP90-like ATPase domain

phrase: SELYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGRDEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYVYIAQ
type: DOMAIN
name: TOPRIM_GyrB
description: DNA gyrase subunit B, TOPRIM domain
Protein sequence:
MMHHCSITKPTFSISISTQKLHHHSSKFLNLGFRIRCESGDVSSPLRTKAVSLSSEMEDSSSLKKSLMELEGKKSEPYPGGMPKMGPFTGRDPNVKKPAWLRQKAPQGERFQEVKESLSRLNLNTVCEEAQCPNIGECWNGGGDGVATATIMVLGDTCTRGCRFCAVKTSRNPPPPDPMEPENTAKAIASWGVDYIVITSVDRDDIPDGGSGHFAQTVKAMKRHKPDIMIECLTSDFRGDLEAVDTLVHSGLDVFAHNVETVKRLQRLVRDPRAGYEQSMSVLKHAKISKPGMITKTSIMLGLGETDEELKEAMADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFDFWKTYGESIGFRYVASGPLVRSSYRAGELFVKTMVKESYSKSLS

Annotated regions:
phrase: VLGDTCTRGCRFCAVKTSRNPPPPDPMEPENTAKAIASWGVDYIVITSVDRDDIPDGGSGHFAQTVKAMKRHKPDIMIECLTSDFRGDLEAVDTLVHSGLDVFAHNVETVKRLQRLVRDPRAGYEQSMSVLKHAKISKPGMITKTSIMLGLGETDEELKEAMA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TATIMVLGDTCTRGCRFCAVKTSRNPPPPDPMEPENTAKAIASWGVDYIVITSVDRDDIPDGGSGHFAQTVKAMKRHKPDIMIECLTSDFRGDLEAVDTLVHSGLDVFAHNVETVKRLQRLVRDPRAGYEQSMSVLKHAKISKPGMITKTSIMLGLGETDEELKEAMADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFDFWKTYG
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: VKKPAWLRQKAPQGERFQEVKESLSRLNLNTVCEEAQ
type: DOMAIN
name: LIAS_N
description: Lipoyl synthase, N-terminal

phrase: DPNVKKPAWLRQKAPQGERFQEVKESLSRLNLNTVCEEAQCPNIGECWNGGGDGVATATIMVLGDTCTRGCRFCAVKTSRNPPPPDPMEPENTAKAIASWGVDYIVITSVDRDDIPDGGSGHFAQTVKAMKRHKPDIMIECLTSDFRGDLEAVDTLVHSGLDVFAHNVETVKRLQRLVRDPRAGYEQSMSVLKHAKISKPGMITKTSIMLGLGETDEELKEAMADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFDFWKTYGESIGFRYVASGPLVRSSYRAGELFVKT
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: GGGDGVATATIMVLGDTCTRGCRFCAVKTSRNPPPPDPMEPENTAKAIASWGVDYIVITSVDRDDIPDGGSGHFAQTVKAMKRHKPDIMIECLTSDFRGDLEAVDTLVHSGLDVFAHNVETVKRLQRLVRDPRAGYEQSMSVLKHAKISKPGMITKTSIMLGLGETDEELKEAMADLRAIDVDILTLGQYLQPTPLHLTVKEYVTPEKFDFWKTYGESIGF
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MGGGVLKQQFVLHAPFLPCGDQPEAIRRLSQGITDGVPAQVLLGTTGSGKTFTMANVIANVNVPTLVLAHNKTLAAQLYQEFKAFFPENAVEYFISYYDYYQPEAYIARSDTYIEKSLLINDEIDKLRLSATRSILERRDTLIVSSISCIYGIGSPDNYSSMALTLEVGKEYPRSQLSSQLVRMHYQASSTPQRSAFRERGSVIDIFLAYESDLAVRLEFMNDTLISIEYVDPLTMIPSHTTSSITLYPGSHYVTPEAVREQAIRTIREELEQRMLFFEGRPVEQERLFQRTTHDIEMIKEIGFCKGIENYSRHFTGAAPGEPPTCLLDYFPDDFLLIIDESHQTLPQLRAMYRGDQSRKQSLVEYGFRLPSAFDNRPLTYEEARRYFHRVIYVSATPGDLEIQESRGHIIEQIIRPTGIPDPLPEIRPAKGQIDDLLEEIRQRLRKDQEKILVISVTKKLAEDIAAFLAELGIAATYLHSGIETAERTQILTDLRLGNIDVLIGVNLLREGIDLPEVSLVAILDADKEGFLRSSASLIQFCGRAARNIHGKVICYADRITPSMDHMLKETERRRKIQLDYNQQHKITPQPIIKPILANPITKEAGQEETRLKMQSSKELEASIKTYEEAMYQAAQEFQFDEAAKYRDLMNAAKKQLLFQKGEEENGD

Annotated regions:
phrase: QIDDLLEEIRQRLRKDQEKILVISVTKKLAEDIAAFLAELGIAATYLHSGIETAERTQILTDLRLGNIDVLIGVNLLREGIDLPEVSLVAILDADKEGFLRSSASLIQFCGRAARNIHGKVICYADRITPSMDHMLKETERRRKIQLDYNQQHKITPQPIIKP
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: DDLLEEIRQRLRKDQEKILVISVTKKLAEDIAAFLAELGIAATYLHSGIETAERTQILTDLRLGNIDVLIGVNLLREGIDLPEVSLVAILDADKEGFLRSSASLIQFCGRAAR
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: QPEAIRRLSQGITDGVPAQVLLGTTGSGKTFTMANVIANVNVPTLVLAHNKTLAAQLYQEFKAFFPENA
type: DOMAIN
name: Helicase/UvrB_N
description: Helicase/UvrB, N-terminal

phrase: ASIKTYEEAMYQAAQEFQFDEAAKYRDLMNAAKK
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: QGITDGVPAQVLLGTTGSGKTFTMANVIANVNVPTLVLAHNKTLAAQLYQEFKAFFPENAVEYFISYYDYYQPEAYIARSDTYIEKSLLINDEIDKLRLSATRSILERRDTLIVSSISCIYGIGSPDNYSSMAL
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: APFLPCGDQPEAIRRLSQGITDGVPAQVLLGTTGSGKTFTMANVIANVNVPTLVLAHNKTLAAQLYQEFKAFFPENAVEYFISYYDYYQPEAYIARSDTYIEKSLLINDEIDKLRLSATRSILERRDTLIVSSISCIYGIGSPDNYSSMALTLEVGKEYPRSQLSSQLVRMHYQASSTPQRSAFRERGSVIDIFLAYESDLAVRLEFMNDTLISIEYVDPLTMIPSHTTSSITLYPGSHYVTPEAVREQAIRTIREELEQRMLFFEGRPVEQERLFQRTTHDIEMIKEIGFCKGIENYSRHFTGAAPGEPPTCLLDYFPDDFLLIIDESHQTLPQLRAMYRGDQSRKQSLVEYGFRLPSAFDNRPLTYEEARRYFHRVIYVSATPGDLEIQESRGHIIEQIIRPTGIPDPLPE
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: EDIAAFLAELGIAATYLHSGIETAERTQILTDLRLGNIDVLIGVNLLREGIDLPEVSLVAILDADKEGFLRSSASLIQFCGRAARN
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: EASIKTYEEAMYQAAQEFQFDEAAKYRDLMNAAKK
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: YADRITPSMDHMLKETERRRKIQLDYNQQHKITPQPIIKP
type: DOMAIN
name: UvrB_YAD/RRR_dom
description: UvrB, YAD/RRR-motif-containing domain

phrase: LTLEVGKEYPRSQLSSQLVRMHYQASSTPQRSAFRERGSVIDIFLAYESDLAVRLEFMNDTLISIEYVDPLTMIPSHTTSSITLYPGSH
type: DOMAIN
name: UvrB_inter
description: UvrB, interaction domain
Protein sequence:
MSRPIPPHRPSPENPSLTIPLDLNAVGPAAPRQAGSGRTIVLVGLMGAGKTTIGRILATRLGIPFVDSDEEIERAAGCTIADLFEKYGEPEFRRGERLVIRRLLAGPPVVLATGGGAFMDARTRASVREHATSIWLRCPLPVLVQRVAERTHRPLLNVAAPHAVLADLMRVRHPVYAEADIIVDCGEDSVEHSADHVIGALKQGQQPLRVPVRLERGSYDVIIGSDVIRRAGALLAPVLPQKRVMILTDETVAPLHLPRLLEGLEETGTRAEVITIPPGEGSKTISMYERVTNALLEAHVERDTTVVALGGGVVGDLAGFCAATTLRGLPFVQIPTTLLSQVDSSVGGKTGINTPFGKNLLGAFHQPIAVLADTSTLATLPVRELRAGYAEIVKSGLLGDAGLFDWCERNGAEVLAGNPAIQAEAIRMACAFKARVVIADEREERKTDGRALLNLGHTFGHALEAEMGYDGSLLHGEAVSIGLRLAFMLSVRLGYCAIEDLERVTRHLEQLSMPARVGDTGRTFSATQLVRNMQRDKKMRDGRLSFVLVHGIGRAFTCRDVPDDAVLEVLRADGCTP

Annotated regions:
phrase: RRGERLVIRRLLAGPPVVLATGGGA
type: CONSERVED_SITE
name: Shikimate_kinase_CS
description: Shikimate kinase, conserved site

phrase: ITIPPGEGSKTISMYERVTNALLEAHVERDTTVVALGGGVVGDLAGFCAATTLRGLPFVQIPTTLLSQVDSSVGGKTGINTPFGKNLLGAFHQPIAVLADTSTLATLPVREL
type: DOMAIN
name: DHQS/DOIS_N
description: 3-dehydroquinate synthase, N-terminal domain

phrase: GYAEIVKSGLLGDAGLFDWCERNGAEVLAGNPAIQAEAIRMACAFKARVVIADEREERKTDGRALLNLGHTFGHALEAEMGYDGSLLHGEAVSIGLRLAFMLSVRLGYCAIEDLERVTRHLEQLSMPARVGDTGRTFSATQLVRNMQRDKK
type: DOMAIN
name: DHQS_C
description: 3-dehydroquinate synthase, C-terminal domain
Protein sequence:
MSVRRTRKDDGSQWTVADSRSVYGIRHWGAGYFAINEAGRVEVRPNGPDSSPIDLYEQVDNLRKSGLSLPLLVRFPDILQDRVRQLTGAFDSNIARLEYQSQYTALYPIKVNQQEAVVENIIATQNVSIGLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELVIEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQGIRLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNASSINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLTAHHAMLVVQVTDVEKHNDEVPKIADKESLPETVQWLVDLLGPTDIEMVTETYWRATHYMSDIATQYADGKISLAEKALGEQCYFAVCRRLYNSLKARQRSHRQVLDELNDKLADKYICNFSVFQSLPDTWAIGQVLPILPLHRLDEEPVRRAVLQDLTCDSDGKIKQYVDEQSIETSMPVHSLNEGEDYLLGIFLVGAYQEILGDMHNLFGDTDSVNIYQNPDGSVYHAGIETHDTIEDMLRYVHLSPEELMTHYRDKVASAKITPRERTYFLDALRLGLTRSSYLSS

Annotated regions:
phrase: GLPVDYIDVGGGL
type: CONSERVED_SITE
name: De-COase2_CS
description: Orn/DAP/Arg decarboxylase 2, conserved site

phrase: ESLPETVQWLVDLLGPTDIEMVTETYWRATHYMSDIATQYADGKISLAEKALGEQCYFAVCRRLYNSLKARQRSHRQVLDEL
type: DOMAIN
name: Arg_decarb_HB
description: Arginine decarboxylase, helical bundle domain

phrase: IEDMLRYVHLSPEELMTHYRDKVASAKITPRERTYFLDALRLGLTRSSY
type: DOMAIN
name: Arg_decarbox_C
description: Arginine decarboxylase, C-terminal helical

phrase: QSQYTALYPIKVNQQEAVVENIIATQNVSIGLEAGSKPELMAVLALAPKGGTIVCNGYKDREFIRLALMGQKLGHNVFIVIEKESEVELVIEEAAELKVAPQVGLRVRLSSLASSKWADTGGEKSKFGLSAAQLLSVVERFRKAGLDQGIRLLHFHMGSQIANLADYQHGFKEAIRYYGELRKLGLPVDYIDVGGGLGVDYDGTHSRNASSINYDMDDYAGVVVGMLKEFCDAQSLPHPHIFSESGRSLT
type: DOMAIN
name: De-COase2_N
description: Orn/DAP/Arg decarboxylase 2, N-terminal
Protein sequence:
MRKYIPLVLFIFSWPVLCADIHGRVVRVLDGDTIEVMDSRKAVRIRLVNIDAPEKKQDYGRWSTDMMKSLVAGKTVTVTYFQRDRYGRILGQVYAPDGMNVNQFMVRAGAAWVYEQYNTDPVLPVLQNEARQQKRGLWSDADPVPPWIWRHRK

Annotated regions:
phrase: DRYGRILGQV
type: ACTIVE_SITE
name: Thermonucl_AS
description: Thermonuclease active site

phrase: DGDTIEVMDSRKAVRIRLVNIDAP
type: ACTIVE_SITE
name: Thermonucl_AS
description: Thermonuclease active site

phrase: ADIHGRVVRVLDGDTIEVMDSRKAVRIRLVNIDAPEKKQDYGRWSTDMMKSLVAGKTVTVTYFQRDRYGRILGQVYAPDGMNVNQFMVRAGAAWVYEQYNTDPVLPVLQNEARQQKRGLWS
type: DOMAIN
name: Staphylococal_nuclease_OB-fold
description: Staphylococcal nuclease (SNase-like), OB-fold

phrase: RIRLVNIDAPEKKQDYGRWSTDMMKSLVAGKTVTVTYFQRDRYGRILGQVYAPDGMNVNQFMVRAGAAWVYEQYNTDPVLPVLQNEARQQKRGLWS
type: DOMAIN
name: Staphylococal_nuclease_OB-fold
description: Staphylococcal nuclease (SNase-like), OB-fold

phrase: ADIHGRVVRVLDGDTIEVMDSRKAVRIRLVNIDAPEKKQDYGRWSTDMMKSLVAGKTVTVTYFQRDRYGRILGQVYAPDGMNVNQFMVRAGAAWVYEQYNTDPVLPVLQNEARQQKRGLWS
type: DOMAIN
name: Staphylococal_nuclease_OB-fold
description: Staphylococcal nuclease (SNase-like), OB-fold
Protein sequence:
MQGTLIRHLGKHVDEEVSIQGWLYNKRSSGKIQFLIVRDGTGLVQGVLVKKEAPEIFELAKELTQESAIRLRGIVREEPRSMGGYELTVTGLEIINLAQEYPISHKEHGVDFLMDRRHLWMRTPRQNAILRIRAEIEQAARDFFNQNDFTLVDSPIITPAACEGTTTLFELDYHGEKAYLSQSGQLYNEASAMAVGRMYCFGPTFRAEKSKTRRHLMEFWMIEAEAAFFDFEDNMKLQEEMVYFIVQRVLERRRQDLELLGRDISKLEAIKLPFPRLSYTEAVELLKSKGEAFEWGEDFGAPHETIISENFESPVFIHRYPTEIKAFYMKPDPEDGRVVLGADLIAPEGYGEMIGGGQRIDDLQLLEQRLEEHKLPKEAFEWYLDLRRYGSVPHSGFGLGLERTVAWICKLDHVRETIPYPRMLYRVYP

Annotated regions:
phrase: LRIRAEIEQAARDFFNQNDFTLVDSPIITPAACEGTTTLFELDYHGEKAYLSQSGQLYNEASAMAVGRMYCFGPTFRAEKSKTRRHLMEFWMIEAEAAFFDFEDNMKLQEEMVYFIVQRVLERRRQDLELLGRDISKLEAIKLPFPRLSYTEAVELLKSKGEAFEWGEDFGAPHETIISENFESPVFIHRYPTEIKAFYMKPDPEDGRVVLGADLIAPEGYGEMIGGGQRIDDLQLLEQRLEEHKLPKEAFEWYLDLRRYGSVPHSGFGLGLERTVAWICKLDHVRETI
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: VSIQGWLYNKRSSGKIQFLIVRDGTGLVQGVLVKKEAPEIFELAKELTQESAIRLRGIVREEPRSMGGYELTVTGLEI
type: DOMAIN
name: NA-bd_OB_tRNA
description: OB-fold nucleic acid binding domain, AA-tRNA synthetase-type

phrase: DFLMDRRHLWMRTPRQNAILRIRAEIEQAARDFFNQNDFTLVDSPIITPAACEGTTTLFELDYHGEKAYLSQSGQLYNEASAMAVGRMYCFGPTFRAEKSKTRRHLMEFWMIEAEAAFFDFEDNMKLQEEMVYFIVQRVLERRRQDLELLGRDISKLEAIKLPFPRLSYTEAVELLKSKGEAFEWGEDFGAPHETIISENFESPVFIHRYPTEIKAFYMKPDPEDGRVVLGADLIAPEGYGEMIGGGQRIDDLQLLEQRLEEHKLPKEAFEWYLDLRRYGSVPHSGFGLGLERTVAWICKLDHVRETIPYPR
type: DOMAIN
name: Aa-tRNA-synt_II
description: Aminoacyl-tRNA synthetase, class II (D/K/N)
Protein sequence:
MKKNDKKNGKNNRPFSGGKKTIAFWLVIFLLMLSVFHFMNEPLVSAHKLGFSEFMSAVKNGEVEQVTIQEDVYSGKYKSGAQFETVGPINSEKALATFEENNVAVNYVKMAEVSIWQHLLSWLPLILLFGFFFFSMRQIQVGGGKAMGFGRSKAKLLNESQKRVTFNDVAGVEEAKEELEEIVAFLKDPKKFTRLGGRIPKGVLLMGSPGTGKTLLAKAIAGEARVPFFSISGSDFVEMFVGVGASRVRDLFEQGKKNAPCIIFIDEIDAVGRHRGAGIGGGHDEREQTLNQLLVEMDGFESNEGVIIMAATNRPDVLDPALLRAGRFDRRITVSRPDLKGRFEILKVHTRNKPLDINADLEVLARGTPGFSGADLENVVNEAALIAARYNKNAITIEDLELAKDKVLMGSERKSMIVSEDEKKNTAYHEAGHALVAKMIPGTDPLHKVTIIPRGMALGLTQQLPVDERYTQNKTYCYNTIAILMGGRAAEQLIFSEPTTGAGNDIERATDLAHKMVCEWGMSEKLGPLAFGKKEEQVFLGKEMGHQKNYSDTTAQVIDEEVHSIVRDGYDKAFKILTDNKKQLEDLAIALLEHESLDADQIDRVVKGEKLAADQKPVQRESNPEKKMNKPSKIRNLIPDPGKA

Annotated regions:
phrase: VLLMGSPGTGKTLLAKAIAGEARVPFFSISGSDFVEMFVGVGASRVRDLFEQGKKNAPCIIFIDEIDAVGRHRGAGIGGGHDEREQTLNQLLVEMDGFESNEGVIIMAATNRPDVLDPALLRAGRFDRRITV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: VIIMAATNRPDVLDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: IPKGVLLMGSPGTGKTLLAKAIAGEARVPFFSISGSDFVEMFVGVGASRVRDLFEQGKKNAPCIIFIDEIDAVGRHRGAGIGGGHDEREQTLNQLLVEMDGFESNEGVIIMAATNRPDVLDPALLRAGRFDRRITVSRP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: MIVSEDEKKNTAYHEAGHALVAKMIPGTDPLHKVTIIPRGMALGLTQQLPVDERYTQNKTYCYNTIAILMGGRAAEQLIFSEPTTGAGNDIERATDLAHKMVCEWGMSEKLGPLAFGKKEEQVFLGKEMGHQKNYSDTTAQVIDEEVHSIVRDGYDKAFKILTDNKKQLEDLAIALLEHESLDADQIDR
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: ADLEVLARGTPGFSGADLENVVNEAALIAARYNKNAITIEDL
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: AFWLVIFLLMLSVFHFMNEPLVSAHKLGFSEFMSAVKNGEVEQVTIQEDVYSGKYKSGAQFETVGPINSEKALATFEENNVAVN
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular
Protein sequence:
MTAPTVVVLAAGEGTRMRSAVPKMLHEICGRPMVQWPIRAAIEAGAGRVVVVGGPGGELDGALPDGVELAVQREPRGTGDAVLAAAERLEGDAPVLVVNGDTPLVTPQLLAAVLQAHTSSGAAATIATVELDDPTGYGRVVRGPDGGVEHIAETKSPGDADEAELRIREVNAGVYAFDGTRLLPALQRVQPDNAQGEYYLPDVLQVFRGDDHGVAAFPVDDPQAVLGVNDRVDLARVRALAQRRIHEAHMRAGVTIVDPDATTIDANVQLGRDTVIEPASFLRGSTRAGERCRIGPLTTIIDSALNDQVTVTHSYLLECEVHDGAKLGPFAYLRPGTVVRANAKVGTFVEVKNSDIGEGTKVPHLTYLGDADVGGQTNIGAGTITANYDGFRKHRTRIGERVHGGVDTSFVAPVEVGDDAWTAAGSAIVDDVPPGALGVARERQRNVEGYDARKRSEEEERRKG

Annotated regions:
phrase: VVVLAAGEGTRMRSAVPKMLHEICGRPMVQWPIRAAIEAGAGRVVVVGGPGGELDGALPDGVELAVQREPRGTGDAVLAAAERLEGDAPVLVVNGDTPLVTPQLLAAVLQAHTSSGAAATIATV
type: DOMAIN
name: MobA-like_NTP_Trfase
description: MobA-like NTP transferase

phrase: GVTIVDPDATTIDANVQLGRDTVIEPASFLRGSTRAGERCRIGPLTTIIDSALNDQVTVTHSYLLECEVHDGAKLGPFAYLRPGTVVRANAKVGTFVEVKNSDIGEGTKVPHLTYLGDADVGGQTNIGAGTITANYDGFRKHRTRIGERVHGGVDTSFVAPVEVGDDAWTAAGSAIVDDVPPGALGVARER
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain
Protein sequence:
MTTSSIRRQMKNIVNSYSEAEIKVREATSNDPWGPSSSLMTEIADLTYNVVRFSEIMSMVWKRLNDHGKNWRHVYKALTLLDYLIKTGSERVAQQCRENIFAIQTLKDFQYIDRDGKDQGINVREKSKQLVALLKDEERLKVERVQALKTKERMAQVATGVGSNQITFGRGSSQPNLSISHSEQEYGKAGGSPASYHGSTSPRVSSELEQARPQTSGEEELQLQLALAMSREVAEQEERLRRGDDLRLQMALEESRRDTVKVPKKKEVKACCKPGSHSQQTTLLDLMDALPSSGPVAQKTEPWSTGTPANQTNPWGGTVAPANISDPWPSFGTKPAASVDPWGVPTTASIQSVPKNSDPWAASQQPASDAGKTADAWGAAKPSPASGSFELFSNFNGTVKDDFSEFDNLRTSKKPAESGASVPPQDSRTTSPDLFESQSLTSASSKPSSARKTPESFLGPNAALVNLDSLVTKPAPPAQSLNPFLAPGAAAPAPVNPFQVNQPQPLTLNQLRGSPVLGSSASFGSGPGVETVAPMPSVAPHSALGATGSSLTPLGPTAMNMVGSMGIPPSAAQPAGTTNPFLL

Annotated regions:
phrase: EEELQLQLALAMSREVAEQ
type: CONSERVED_SITE
name: UIM_dom
description: Ubiquitin interacting motif

phrase: GDDLRLQMALEESRRDTVK
type: CONSERVED_SITE
name: UIM_dom
description: Ubiquitin interacting motif

phrase: SEAEIKVREATSNDPWGPSSSLMTEIADLTYNVVRFSEIMSMVWKRLNDHGKNWRHVYKALTLLDYLIKTGSERVAQQCRENIFAIQTLKDFQYIDRDGKDQGINVREKSKQLVALLKDEERLKVE
type: DOMAIN
name: ENTH
description: ENTH domain

phrase: GDDLRLQMALEESRRDTVK
type: CONSERVED_SITE
name: UIM_dom
description: Ubiquitin interacting motif

phrase: NIVNSYSEAEIKVREATSNDPWGPSSSLMTEIADLTYNVVRFSEIMSMVWKRLNDHGKNWRHVYKALTLLDYLIKTGSERVAQQCRENIFAIQTLKDFQYIDRDGKDQGINVREKSKQLVALLKDEERLKVE
type: DOMAIN
name: ENTH
description: ENTH domain

phrase: YSEAEIKVREATSNDPWGPSSSLMTEIADLTYNVVRFSEIMSMVWKRLNDHGKNWRHVYKALTLLDYLIKTGSERVAQQCRENIFAIQTLKDFQYIDRDGKDQGINVREKSKQLVALLKDEER
type: DOMAIN
name: ENTH
description: ENTH domain

phrase: EEELQLQLALAMSREVAEQ
type: CONSERVED_SITE
name: UIM_dom
description: Ubiquitin interacting motif
Protein sequence:
MSTPTFTVADIRKSFLDFFASKGHTIVESSPLVPGNDPTLMFTNSGMVQFKDVFLGTDKRPYKRATSVQTCLRAGGKHNDLENVGYTARHHTFFEMLGNWSFGDYFKRESLKWAWELLTEVYKLPKERLLATVYAEDDEAYDIWTKEIGLPPERVIRIGDNKGGRYKSDNFWMMADTGPCGPCSEIFYDHGAHVAGGPPGSPDEDGDRFIEIWNNVFMQFDMDEQGNVKPLPAPCVDTGMGLERLAAILQHVHSNYEIDLFQALIKAAARETHIADIETPSLKVIADHIRATAFLVADGVIPSNEGRGYVQRRIVRRAIRHGYKLGQKTPFFHKLVKDLVAVMGDAYPKIREQEARITEVLRVEEERFFETLANGMEILDAALAGGAKVLPGDVAFKLHDTYGFPLDLTNDVCRERGLSVDEAGFQTAMEEQKNKARAAGKFKMDRALEYTGDANAFTGYQKLAEAAKVVALYAEGSAVQELKAGQSGVVVLDTTPFYAESGGQVGDQGVISTAGARFAVEDTLKIKADVFGHHGVLESGSLKVGDAVQAEVDTQLRAATMRNHSVTHIMHKALREVLGDHVQQKGSLVNAERTRFDFAHNQPVTAEEIREIERRVNAEILANTPTDARVMDIESAKATGAMMLFGEKYGDSVRVLDIGSSRELCGGTHVQRTGDIGLFKVVGEGGVAAGVRRIEAVTGENALAYLQSLESTVDQAAAALKAPTAELNTRIGGALEQIRALEKEVAALKGKLASSQGDELAGQAVDVKGIKVLAARLEGADAKTLRDTMDKLKDKLGAAAIVLAAVDGDKVQLAAGVTKAETSRIKAGDLVNFVASQVGGKGGGKPDMAMAGGTDASGLPAALAGVHAWVAERV

Annotated regions:
phrase: DIRKSFLDFFASKGHTIVESSPLVPGNDPTLMFTNSGMVQFKDVFLGTDKRPYKRATSVQTCLRAGGKHNDLENVGYTARHHTFFEMLGNWSFGDYFKRESLKWAWELLTEVYKLPKERLLATVYAEDDEAYDIWTKEIGLPPERVIRIGDNKGGRYKSDNFWMMADTGPCGPCSEIFYDHGAHVAGGPPGSPDEDGDRFIEIWNNVFMQFDMDEQGNVKPLPAPCVDTGMGLERLAAILQHVHSNYEIDLFQALIKAAARETHIADIETPSLKVIADHIRATAFLVADGVIPSNEGRGYVQRRIVRRAIRHGYKLGQKTPFFHKLVKDLVAVMGDAYPKIREQEARITEVLRVEEERFFETLANGMEILDAALAGGAKVLPGDVAFKLHDTYGFPLDLTNDVCRERGLSVDEAGFQTAMEEQKNKARAAGKFKMDRALEYTGDANAFTGYQKLAEAAKVVALYAEGSAVQELKAGQSGVVVLDTTPFYAESGGQVGDQGVISTAGARFAVEDTLKIKADVFGHHGVLESGSLKVGDAVQAEVDT
type: DOMAIN
name: Ala-tRNA-synth_IIc_N
description: Alanyl-tRNA synthetase, class IIc, N-terminal

phrase: VRVLDIGSSRELCGGTHVQRTGDIGLFKVVGEGGVAAGVRRI
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD

phrase: VRVLDIGSSRELCGGTHVQRTGDIGLFKVVGEGGVAAGVRRI
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD

phrase: IKVLAARLEGADAKTLRDTMDKLKDKLGAAAIVLAAVDGDKVQLAAGVTKAETSRIKAGDLVNFVASQVGGKGGGKPDMAMAGGTDASGLPAALAGVHAWVA
type: DOMAIN
name: DHHA1_dom
description: DHHA1 domain

phrase: FTVADIRKSFLDFFASKGHTIVESSPLVPGNDPTLMFTNSGMVQFKDVFLGTDKRPYKRATSVQTCLRAGGKHNDLENVGYTARHHTFFEMLGNWSFGDYFKRESLKWAWELLTEVYKLPKERLLATVYAEDDEAYDIWTKEIGLPPERVIRIGDNKGGRYKSDNFWMMADTGPCGPCSEIFYDHGAHVAGGPPGSPDEDGDRFIEIWNNVFMQFDMDEQGNVKPLPAPCVDTGMGLERLAAILQHVHSNYEIDLFQALIKAAARETHIADIETPSLKVIADHIRATAFLVADGVIPSNEGRGYVQRRIVRRAIRHGYKLGQKTPFFHKLVKDLVAVMGDAYPKIREQEARITEVLRVEEERFFETLANGMEILDAALAGGAKVLPGDVAFKLHDTYGFPLDLTNDVCRERGLSVDEAGFQTAMEEQKNKARAAGKFKMDRALEYTGDANAFTGYQKLAEAAKVVALYAEGSAVQELKAGQSGVVVLDTTPFYAESGGQVGDQGVISTAGARFAVEDTLKIKADVFGHHGVLESGSLKVGDAVQAEVDTQLRAATMRNHSVTHIMHKALREVLGDHVQQKGSLVNAERTRFDFAHNQPVTAEEIREIERRVNAEILANTPTDARVMDIESAKATGAMMLFGEKYGDSVRVLDIGSSRELCGGTHVQRTGDIGLFKVVGEGGVAAGVRRIEAVTGENALAYLQ
type: DOMAIN
name: Ala-tRNA-synth_IIc_core
description: Alanyl-tRNA synthetase, class IIc, core domain
Protein sequence:
MINLKLIETNFDEFNAKLKAKKVDEGVLKNLLDTYNELKIKKQELENLQAVQNAKSKEVGILARSGADTTLLKTELEENKKLMQTASNLVSELETKLDTVASRVPNVIDDDVPLGKDDNDNVCIKTILEPREFNFTPKEHFELGENLGWLDFATGAKLSGSRFTVLRSDGARLSRALVNFMIDFNTARGFELVNVPFLVNSNTLYGTGQLPKFEEDLYKIRDEDLYLIPTSEVPVTNIYNNEIIPVENLPIKMTCYSACFRQEAGSAGRDTRGMIRQHQFEKVELVSISKPEDSAKILDEMVSCASDMLKELGLPHRHMMLCSADLGFGAAKTIDLEVWLPGQGKYREISSISNTRDFQARRAKIRYKDGKKNALVHTLNGSSLAVGRTLIAIMENYQNSDGSINIPEVLKKYM

Annotated regions:
phrase: MINLKLIETNFDEFNAKLKAKKVDEGVLKNLLDTYNELKIKKQELENLQAVQNAKSKEVGILARSGADTTLLKTELEENKKLMQTASNLVSELETKLDTVASRVPN
type: DOMAIN
name: Ser-tRNA-synth_1_N
description: Serine-tRNA synthetase, type1, N-terminal

phrase: DNVCIKTILEPREFNFTPKEHFELGENLGWLDFATGAKLSGSRFTVLRSDGARLSRALVNFMIDFNTARGFELVNVPFLVNSNTLYGTGQLPKFEEDLYKIRDEDLYLIPTSEVPVTNIYNNEIIPVENLPIKMTCYSACFRQEAGSAGRDTRGMIRQHQFEKVELVSISKPEDSAKILDEMVSCASDMLKELGLPHRHMMLCSADLGFGAAKTIDLEVWLPGQGKYREISSISNTRDFQARRAKIRYKDGKKNALVHTLNGSSLAVGRTLIAIMENYQNSDGSINIPEVLKKY
type: DOMAIN
name: SerRS_core
description: Serine-tRNA ligase catalytic core domain

phrase: RDEDLYLIPTSEVPVTNIYNNEIIPVENLPIKMTCYSACFRQEAGSAGRDTRGMIRQHQFEKVELVSISKPEDSAKILDEMVSCASDMLKELGLPHRHMMLCSADLGFGAAKTIDLEVWLPGQGKYREISSISNTRDFQARRAKIRYKDGKKNALVHTLNGSSLAVGRTLIAIMEN
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: EHFELGENLGWLDFATGAKLSGSRFTVLRSDGARLSRALVNFMIDFNTARGFELVNVPFLVNSNTLYGTGQLPKFEEDLYKIRDEDLYLIPTSEVPVTNIYNNEIIPVENLPIKMTCYSACFRQEAGSAGRDTRGMIRQHQFEKVELVSISKPEDSAKILDEMVSCASDMLKELGLPHRHMMLCSADLGFGAAKTIDLEVWLPGQGKYREISSISNTRDFQARRAKIRYKDGKKNALVHTLNGSSLAVGRTLIAIMENYQNSDGSINI
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II
Protein sequence:
MLYISGARLVADKQVRIALTKMYGIGPKKAIQVCYRLGISGNIKIKELTKYQIDQMEQMIGQDHVVHWELKRGERADIERFISISCYRGIRHQDGLPLRGQRTHTNARTCRKQIRK

Annotated regions:
phrase: RGIRHQDGLPLRG
type: CONSERVED_SITE
name: Ribosomal_uS13_CS
description: Small ribosomal subunit protein uS13, conserved site
Protein sequence:
MLANDNTNMKVFSLNSNIPLAEEVVKHIGIDLGKSTITRFSDGEIQMNIEESIRGCDIYLIQSTAQPGNDYIMELLIMIDALKRASAKTINCVIPYFGYSRQDRKARSREPVTAKLIANLLEKAGASRIITVDLHSPQVQGFFNVPVDQLLAFPLLSKYFIDKALDDVVVVAPENNGVVRARKLADALDSSIAFIDRNRRPKTYIPGGMEIMGDVSGKTAIIIDDMVDTARTVTTASNALIERGAKEVYACCTHPVLSEPASTWIEESPIKELVTTNSIHLPDERRIDKITTLSIAPLLGEAIIKVQNNRSVSTLFK

Annotated regions:
phrase: PLLSKYFIDKALDDVVVVAPENNGVVRARKLADALDSSIAFIDRNRRPKTYIPGGMEIMGDVSGKTAIIIDDMVDTARTVTTASNALIERGAKEVYACCTHPVLSEPASTWIEESPIKELVTTN
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: MKVFSLNSNIPLAEEVVKHIGIDLGKSTITRFSDGEIQMNIEESIRGCDIYLIQSTAQPGNDYIMELLIMIDALKRASAKTINCVIPYFGYSRQDRKARSREPVTAKLIANLLEKA
type: DOMAIN
name: Pribosyltran_N
description: Ribose-phosphate pyrophosphokinase, N-terminal domain

phrase: DLHSPQVQGFFNVPV
type: CONSERVED_SITE
name: PRib_PP_synth_CS
description: Phosphoribosyl pyrophosphate synthetase, conserved site