Protein sequence:
MGQELSQHERYVEQLKQALKTRGVKVKYADLLKFFDFVKDTCPWFPQEGTIDIKRWRRVGDCFQDYYNTFGPEKVPVTAFSYWNLIKELIDKKEVNPQVMAAVAQTEEILKTSSHTELTTKPSQNPDLDLISLDSDDEGAKGSSLKDKNLSCTKKPKRFPVLLTAQTSADPEDPNPSEVDWDGLEDEAAKYHNPDWPPFLTRPPPYNKATPSAPTVMAVVNPKEELKEKIAQLEEQIKLEELHQALISKLQKLKTGNETVTSPETAGGFSRTPHWPGQHIPKGKCCASREKEEQTPKDIFPVTETVDGQGQAWRHHNGFDFTVIKELKTAASQYGATAPYTLAIVESVADNWLTPTDWNTLVRAVLSGGDHLLWKSEFFENCRETAKRNQQAGNGWDFDMLTGSGNYSSTDAQMQYDPGLFAQIQAAATKAWRKLPVKGDPGASLTGVKQGPDEPFADFVHRLITTAGRIFGSAEAGVDYVKQLAYENANPACQAAIRPYRKKTDLTGYIRLCSDIGPSYQQGLAMAAAFSGQTVKDFLNNKNKEKGGCCFKCGRKGHFAKNCHEHIHNNSETKAPGLCPRCKRGKHWANECKSKTDSQGNPLPPHQGNRTEGPAPGPETSLWGGQLCSSQQKQPISKLTRATPGSAGLDLSSTSHTVLTPEMGPQALSTGIYGPLPPNTFGLILGRSSITIKGLQVYPGVIDNDYTGEIKIMAKAVNNIVTVPQGNRIAQLILLPLIETDNKVQQPYRGQGSFGSSDIYWVQPITCQKPSLTLWLDDKMFTGLIDTGADVTIIKLEDWPPNWPITDTLTNLRGIGQSNNPKQSSKYLTWRDKENNSGLIKPFVIPNLPVNLWGRDLLSQMKIMMCSPSDIVTAQMLAQGYSPGKGLGKNENGILHPIPNQGQFDKKGFGNFLTAAIDMLAPQQCAEPITWKSDEPVWVDQWPLTSEKLAAAQQLVQEQLEAGHITESNSPWNTPIFVIKKKSGKWRLLQDLRAVNATMVLMGALQPGLPSPVAIPQGYLKIIIDLKDCFFSIPLHPSDQKRFAFSLPSTNFKEPMQRFQWKVLPQRMANSPTLCQKYVATAIHKVRHAWKQMYIIHYMDDILIAGKDGQQVLQCFDQLKQELTIAGLHIAPEKIQLQDPYTYLGFELNGPKITNQKAVIRKDKLQTLNDFQKLLGDINWLRPYLKLTTADLKPLFDTLKGDSNPNSHRSLSKEALALLDKVETAIAEQFVTHINYSLPLMFLIFNTALTPTGLFWQNNPIMWVHLPASPKKVLLPYYDAIADLIILGRDHSKKYFGIEPSVIIQPYSKSQIDWLMQNTEMWPIACASYVGILDNHYPPNKLIQFCKLHAFIFPQIISKTPLNNALLVFTDGSSTGMAAYTLADTTIKFQTNLNSAQLVELQALIAVLSAFPNQPLNIYTDSAYLAHSIPLLETVAQIKHISETAKLFLQCQQLIYNRSIPFYIGHVRAHSGLPGPIAHGNQKADLATKTVASNINTNLESAQNAHTLHHLNAQTLKLMFNIPREQARQIVRQCPICATYLPVPHLGVNPRGLLPNMIWQMDVTHYSEFGNLKYIHVSIDTFSGFLLATLQTGETTKHVITHLLHCFSIIGLPKQIKTDNGPGYTSKNFQEFCSTLQIKHVTGIPYNPQGQGIVERAHLSLKTTIEKIKKGEWYPTKGTPRNILNHALFILNFLNLDDQNHSAADRFWHSNPRKQFAMVKWKDPLDNTWPWPDPVIIWGRGSVCVYSQTHDAARWLPERLVKQIPNNNQSRE

Annotated regions:
phrase: LEAGHITESNSPWNTPIFVIKKKSGKWRLLQDLRAVNATMVLMGALQPGLPSPVAIPQGYLKIIIDLKDCFFSIPLHPSDQKRFAFSLPSTNFKEPMQRFQWKVLPQRMANSPTLCQKYVATAIHKVRHAWKQMYIIHYMDDILIAGKDGQQVLQCFDQLKQELTIAGLHIAPEKIQLQDPYTYLGFE
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: AGLDLSSTSHTVLTPEMGPQALSTGIYGPLPPNTFGLILGRSSITIKGLQVYPGVIDNDYTGEIKIMAKAVNNIVTVPQGNRIAQLI
type: DOMAIN
name: dUTPase_trimeric
description: dUTPase, trimeric

phrase: CSPSDIVTAQMLAQGYSPGKGLGKNENGILHPIPNQGQFDKKGFGN
type: DOMAIN
name: G_patch_dom
description: G-patch domain

phrase: HERYVEQLKQALKTRGVKVKYADLLKFFDFVKDTCPWFPQEGTIDIKRWRRVGDCFQDYYNTFGPEKVPVTAFSYWNLIKELI
type: DOMAIN
name: B_retro_matrix
description: Beta-retroviral matrix protein

phrase: GLIDTGADVTI
type: ACTIVE_SITE
name: Aspartic_peptidase_AS
description: Aspartic peptidase, active site

phrase: AQNAHTLHHLNAQTLKLMFNIPREQARQIVRQCPIC
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: SLTGVKQGPDEPFADFVHRLITTAGRIFGSAEAGVDYVKQLAYENANPACQAAIRPYRKKTDLTGYI
type: DOMAIN
name: Gag_p24_C
description: Retroviral nucleocapsid Gag protein p24, C-terminal domain

phrase: LNNALLVFTDGSSTGMAAYTLADTTIKFQTNLNSAQLVELQALIAVLSAFPNQPLNIYTDSAYLAHSIPLLETVAQIKHISETAKLFLQCQQLIYNRSIPFYIGHVRAHSGLPGPIAHGNQKADLATKTVA
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: LTLWLDDKMFTGLIDTGADVTIIKLEDWPPNWPITDTLTNLRGIGQSNNPKQSSKYLTWRDKENNSGLIKPFVIPNLPVNLWGRDLL
type: DOMAIN
name: Retropepsin-like_cat_dom
description: Retropepsin-like catalytic domain

phrase: NALLVFTDGSSTGMAAYTLADTTIKFQTNLNSAQLVELQALIAVLSAFPNQPLNIYTDSAYLAHSIPLLETVAQIKHISETAKLFLQCQQLIYNRSIPFYIGHVRAHSGLPGPIAHGNQKADLATKTV
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: VKWKDPLDNTWPWPDPVIIWGRGSVCVYSQTHDAARWLPERLVKQ
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: FTGLIDTGADVTIIKLEDWPPNWPITDTLTNLRGIGQSNNPKQSSKYLTWRDKENNSGLIKPFVIPNLPVNLWGRD
type: DOMAIN
name: Peptidase_A2_cat
description: Peptidase A2A, retrovirus, catalytic

phrase: AMVKWKDPLDNTWPWPDPVIIWGRGSVCVYSQTHDAARWLPERLVKQIP
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: PNMIWQMDVTHYSEFGNLKYIHVSIDTFSGFLLATLQTGETTKHVITHLLHCFSIIGLPKQIKTDNGPGYTSKNFQEFCSTLQIKHVTGIPYN
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: SKLTRATPGSAGLDLSSTSHTVLTPEMGPQALSTGIYGPLPPNTFGLILGRSSITIKGLQVYPGVIDNDYTGEIKIMAKAVNNIVTVPQGNRIAQLILLPLIETDNKVQQPYRGQGSFGS
type: DOMAIN
name: dUTPase-like
description: dUTPase-like

phrase: TNLESAQNAHTLHHLNAQTLKLMFNIPREQARQIVRQCPIC
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: LCPRCKRGKHWANECK
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: CCFKCGRKGHFAKNCH
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: PSDIVTAQMLAQGYSPGKGLGKNENGILHPIPNQGQFDKKGFGNFL
type: DOMAIN
name: G_patch_dom
description: G-patch domain

phrase: QKAVIRKDKLQTLNDFQKLLGDINWLRPYLKLTTADLKPLFDTLKGDSNPNSHRSLSKEALA
type: DOMAIN
name: RVT_thumb
description: Reverse transcriptase thumb

phrase: QKPSLTLWLDDKMFTGLIDTGADVTIIKLEDWPPNWPITDTLTNLRGIGQSNNPKQSSKYLTWRDKENNSGLIKPFVIPNLPVNLWGRDLLSQMKI
type: DOMAIN
name: Retropepsins
description: Retropepsins

phrase: IKKKSGKWRLLQDLRAVNATMVLMGALQPGLPSPVAIPQGYLKIIIDLKDCFFSIPLHPSDQKRFAFSLPSTNFKEPMQRFQWKVLPQRMANSPTLCQKYVATAIHKVRHAWKQMYIIHYMDDILIAGKDGQQVLQCFDQLKQELTIAGLHIAPEKIQLQDPYTYLGFE
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: CFKCGRKGHFAKN
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: MLAQGYSPGKGLGKNENGILHPIPNQGQFDKKGFG
type: DOMAIN
name: G_patch_dom
description: G-patch domain

phrase: RGLLPNMIWQMDVTHYSEFGNLKYIHVSIDTFSGFLLATLQTGETTKHVITHLLHCFSIIGLPKQIKTDNGPGYTSKNFQEFCSTLQIKHVTGIPYNPQGQGIVERAHLSLKTTIEKIKKGEWYPTKGTPRNILNHALFILNFLNLDDQNHSAADRFWHSNPRKQFAMV
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core