nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MFYQENFDVIVIGGGHAGTEAALAAARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAEAIDHSGIQFRTLNASKGPAVRATRAQADRALYKTYVRSVLENQPNLTLFQQAVDDLIIENDKVIGAVTQMGLKFRAKSVVLTAGTFLGGQIHIGMENFSGGRAGDPSSITLAQRLRDRPFRIDRLKTGTPPRIDARSVDFSNLEAQPGDNPTPVFSFLGNRQQHPQQVNCFITHTNEKTHDVIRKNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKDSHQIFIEPEGLTTHELYPNGISTSLPFDVQLQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKATYETKFIEGLFFAGQINGTTGYEEAAAQGLMAGLNASLFSQGKEGWSPRRDEAYMGVLIDDLSTLGTKEPYRMFTSRAEYRLSLREDNADLRLTEQGRELGLVDDIRWSRFNEKVENIEKERQRLKDIWINPTSENIDQVNSILKTPIVREASGEDLLRRPEVTYSSLMTIEKFGPASDDQQASEQVEIQTKYAGYIQRQRDEIEKSLRHENTKLPFDLEYNKVKGLSNEVVAKLSDAKPESIGIASRISGITPAAISILLVHLKKHGLLKKGK

Annotated regions:
phrase: AGQINGTTGYEEAAAQGLMAGLN
type: CONSERVED_SITE
name: MnmG-rel_CS
description: MnmG-related, conserved site

phrase: DVIVIGGGHAGTEAALAAARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAEAIDHSGIQFRTLNASKGPAVRATRAQADRALYKTYVRSVLENQPNLTLFQQAVDDLIIENDKVIGAVTQMGLKFRAKSVVLTAGTFLGGQIHIGMENFSGGRAGDPSSITLAQRLRDRPFRIDRLKTGTPPRIDARSVDFSNLEAQPGDNPTPVFSFLGNRQQHPQQVNCFITHTNEKTHDVIRKNLDRSPMYAGVIEGIGPRYCPSIEDKVMRFADKDSHQIFIEPEGLTTHELYPNGISTSLPFDVQLQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKATYETKFIEGLFFAGQINGTTGYEEAAAQGLMAGLNASLFSQGK
type: DOMAIN
name: MnmG_N
description: MnmG, N-terminal domain

phrase: GPRYCPSIEDKVMR
type: CONSERVED_SITE
name: MnmG-rel_CS
description: MnmG-related, conserved site

phrase: TKYAGYIQRQRDEIEKSLRHENTKLPFDLEYNKVKGLSNEVVAKLSDAKPESIGIASRISGITPAAISILL
type: DOMAIN
name: MnmG_C_subdom
description: tRNA uridine 5-carboxymethylaminomethyl modification enzyme, C-terminal subdomain

phrase: KSLRHENTKLPFDLEYNKVKGLSNEVVAKLSDAKPESIGIASRISGITPAAISIL
type: DOMAIN
name: MnmG_C
description: tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG, C-terminal

phrase: RWSRFNEKVENIEKERQRLKDIWINPTSENIDQVNSILKTPIVREASGEDLLRRPEVTYSSLMTIEKFGPASDDQQASEQVEIQTKYAGYIQRQ
type: DOMAIN
name: GIDA_C_N
description: tRNA uridine 5-carboxymethylaminomethyl modification enzyme, C-terminal, N-terninal subdomain
Protein sequence:
MAKNKFNHSWLHDHINDPYVKMAQREGYRARAAYKLKEIDEQDKLIRPGQVIVDLGAAPGSWSQYARNKLADSPRAKDGRIDGAVVAIDLLPMEPVADVTFIQGDFREESVFRELESVVLDASGGNKIDLVLSDMAPNLSGVAFADAARIEYLCDLALEFAQAHLKPEGALLVKCFHGSGYSQIVEKFKRHFKVVAKRKPKASRDKSSETFILGRYLKAVD

Annotated regions:
phrase: YRARAAYKLKEIDEQDKLIRPGQVIVDLGAAPGSWSQYARNKLADSPRAKDGRIDGAVVAIDLLPMEPVADVTFIQGDFREESVFRELESVVLDASGGNKIDLVLSDMAPNLSGVAFADAARIEYLCDLALEFAQAHLKPEGALLVKCFHGSGYSQIVEKFKRHFKVVAKRKPKASRDKSSETFILG
type: DOMAIN
name: RNA_MeTrfase_FtsJ_dom
description: Ribosomal RNA methyltransferase, FtsJ domain
Protein sequence:
MERVGASTAELAEPALPASVPATRVDPHVPEWKVTAAGVVATIVQLAAVFSLLMIVFEDTYPDAVYTVTDLFYFVGLPVDSNVFVALLFAVLGAALRRRKRAALRALLLLQFLWLGLTLLVDLLVLVSPDPSGLVDPDLLDPDQPVSRADLIWPTVPYLAATIVVLAVLWTLRPAFPARLEKGAWRRALAVLVAGLALATLIGWALVEIFPGQLVAATDKLAWAGSQVTGNLVDPITGLSLPRFRPDTGPVGPGWLSVFLGFLGAAVAAYALAVFFRSVRTRRVLSQEEELRIRELLADHGEPDSLGYFATRRDKSVVFAPSGRAAVTYRVLGGTSLASGDPVGDAEHWPAAIAAWLAEARRYGWVVAVLGAGENGAHAYTEAGLKALEIGDEAILEVRDFTLTGRERRAVRQAVNRVERAGYRVQVRRHGEIPEDEMTELLAAAQRWRGAETERGFSMALGRLGDPSDECNVMVEAYDAEGRLRGLLSLVPWGRRGLSLDLMRRDRSAENGLNEYMVASLAASAGKLGIQRISLNFAMFRAVFEEGARIGAWPVLRLWRGLLSVASRFFQLESLYRSNAKYGPWWKPRFLCYGRARELVRVGIVGGVAEGFVPSMRSLVRRRDHTLETGAVDEDFARRVREINTRAEPRPPERRLPEQVRVRLAKLNRLRAEGVDPYPVGFERGELLGSVSDRFTELAPDTRTGVQVTVAGRLVAKRELGKLAFAVLRDFSGELQVMLTADALGKDGLAEWLAAIDLGDLVGVRGEV

Annotated regions:
phrase: VPEWKVTAAGVVATIVQLAAVFSLLMIVFEDTYPDAVYTVTDLFYFVGLPVDSNVFVALLFAVLGAALRRRKRAALRALLLLQFLWLGLTLLVDLLVLVSPDPSGLVDPDLLDPDQPVSRADLIWPTVPYLAATIVVLAVLWTLRPAFPARLEKGAWRRALAVLVAGLALATLIGWALVEIFPGQLVAATDKLAWAGSQVTGNLVDPITGLSLPRFRPDTGPVGPGWLSVFLGFLGAAVAAYALAVF
type: DOMAIN
name: tRNA-synt_2_TM
description: Lysyl-tRNA synthetase, N-terminal transmembrane region

phrase: RELLADHGEPDSLGYFATRRDKSVVFAPSGRAAVTYRVLGGTSLASGDPVGDAEHWPAAIAAWLAEARRYGWVVAVLGAGENGAHAYTEAGLKALEIGDEAILEVRDFTLTGRERRAVRQAVNRVERAGYRVQVRRHGEIPEDEMTELLAAAQRWRGAETERGFSMALGRLGDPSDECNVMVEAYDAEGRLRGLLSLVPWGRRGLSLDLMRRDRSAENGLNEYMVASLAASAGKLGIQRISLNFAMFRAVFEEGARIGAWPVLRLWRGLLSVASRFFQLESLYRSNAKYGPWWKPRFLC
type: DOMAIN
name: LPG_synthase_C
description: Phosphatidylglycerol lysyltransferase, C-terminal

phrase: VTVAGRLVAKRELGKLAFAVLRDFSGELQVMLTADALGKDGLAEWLAAIDLGDLVGVRGE
type: DOMAIN
name: NA-bd_OB_tRNA
description: OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
Protein sequence:
MHDAPAQRKRRRPGRIGPLPRSSRFARLKLLIASACAALLATLALPPGAAHAQTVTSNQTGNHNGYFYSFWTDAPGTVSATMGSGGNYSTSWRNTGNFVIGKGWSTGGRRTVTYSGSFNPSGNAYLTLYGWSRNPLVEYYIVDNWGTYRPTGTFKGTVTTDGGTYDIYQTTRYNAPSIEGNKTFNQYWSVRQQKRTGGTITTGNHFDAWARAGMQLGSHDYMIMATEGYQSSGSSNITVGGTSGGGGGGGGGGGCTATLSAGERWDDRYNLNVSVSGSSNWTVTMNVPSPATILSTWNITATWPSSQVLVARPNGSGNNFGVTIKHNGNWTWPTVSCSTG

Annotated regions:
phrase: PLVEYYIVDN
type: ACTIVE_SITE
name: GH11_AS_1
description: Glycoside hydrolase family 11, active site 1

phrase: TVTSNQTGNHNGYFYSFWTDAPGTVSATMGSGGNYSTSWRNTGNFVIGKGWSTGGRRTVTYSGSFNPSGNAYLTLYGWSRNPLVEYYIVDNWGTYRPTGTFKGTVTTDGGTYDIYQTTRYNAPSIEGNKTFNQYWSVRQQKRTGGTITTGNHFDAWARAGMQLGSHDYMIMATEGYQSSGSSNITV
type: DOMAIN
name: GH11_dom
description: Glycosyl hydrolase 11 domain

phrase: HNGYFYSFWTDAPGTVSATMGSGGNYSTSWRNTGNFVIGKGWSTGGRRTVTYSGSFNPSGNAYLTLYGWSRNPLVEYYIVDNWGTYRPTGTFKGTVTTDGGTYDIYQTTRYNAPSIEGNKTFNQYWSVRQQKRTGGTITTGNHFDAWARAGMQLGSHDYMIMATEGYQSSGSSNI
type: DOMAIN
name: GH11_dom
description: Glycosyl hydrolase 11 domain

phrase: CTATLSAGERWDDRYNLNVSVSGSSNWTVTMNVPSPATILSTWNITATWPSSQVLVARPNGSGNNFGVTIKHNGNWTWPTVS
type: DOMAIN
name: CBD2
description: Carbohydrate-binding type-2 domain

phrase: MATEGYQSSGS
type: ACTIVE_SITE
name: GH11_AS_2
description: Glycoside hydrolase family 11, active site 2

phrase: GGGGGGGCTATLSAGERWDDRYNLNVSVSGSSNWTVTMNVPSPATILSTWNITATWPSSQVLVARPNGSGNNFGVTIKHNGNWTWPTVSCST
type: DOMAIN
name: CBD2
description: Carbohydrate-binding type-2 domain
Protein sequence:
MNIGILTGGGDCPGLNSVIRAIVKKTSKLGHHVVGIRDGWKGLIDLNFIELNTGSASGILHLGGTILGTSRTNPFAKEGGPQKVMDNIKKLGIDALVAIGGDDTLGVAHKLYGMGINTIGVPKTIDNDLSATDFTFGFDSAVNIVMNALDNLHSTAESHHRVMVVEVMGRHAGWIATYGGLAGGADYILIPEKPFTIDEVCDSIKRRHATGRTFSIIVVAEGAVLEETEVVITKDVKKDAFGHVMLGGVGKFLCTEIEKRTGFECRDVVLGHLQRGGSPTAFDRILATRYGIAAVDLIEKKDFGKMVALRGNQIVAVSLEEGVKRAKTVDMDVYEIAKTFFG

Annotated regions:
phrase: RDVVLGHLQRGGSPTAFD
type: CONSERVED_SITE
name: Phosphofructokinase_CS
description: Phosphofructokinase, conserved site

phrase: NIGILTGGGDCPGLNSVIRAIVKKTSKLGHHVVGIRDGWKGLIDLNFIELNTGSASGILHLGGTILGTSRTNPFAKEGGPQKVMDNIKKLGIDALVAIGGDDTLGVAHKLYGMGINTIGVPKTIDNDLSATDFTFGFDSAVNIVMNALDNLHSTAESHHRVMVVEVMGRHAGWIATYGGLAGGADYILIPEKPFTIDEVCDSIKRRHATGRTFSIIVVAEGAVLEETEVVITKDVKKDAFGHVMLGGVGKFLCTEIEKRTGFECRDVVLGHLQRGGSPTAFDRILATRYGIAAVDL
type: DOMAIN
name: Phosphofructokinase_dom
description: Phosphofructokinase domain
Protein sequence:
MRPLAIIGPTGSGKSQLALDVAERLAGEVPAEIVNADAMQLYRGMDIGTAKLSVAARRGIPHHQLDVLNVAETATVARYQQAAAADIEAIIARGHVPIVVGGSMLYVQSLLDNWSFPATDPAVRARWEECLAELGVGELHAELARRDPAAAATILPTDGRRIVRALEVIELTGQPFAASAPRIGAAQWGTAIIGLDCDTPILDDRLAVRTDSMFERGLVEEVRVLLRAGLRDGVTAARALGYAQVLAALDAGGGAELLDDAREQTYFGTRRYVRRQRSWFRRDHRVHWCDAGATGPSDRAAMVDEALRVWRHVT

Annotated regions:
Protein sequence:
MPNWGGGKKCGVCQKTVYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVAVHGEEIYCKSCYGKKYGPKGYGYGQGAGTLSTDKGESLGIKHEEAPGHRPTTNPNASKFAQKIGGSERCPRCSQAVYAAEKVIGAGKSWHKSCFRCAKCGKGLESTTLADKDGEIYCKGCYAKNFGPKGFGFGQGAGALVHSE

Annotated regions:
phrase: CPRCSQAVYAAEKVIGAGKSWHKSCFRCAKCGKG
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: RCPRCSQAVYAAEKVIGAGKSWHKSCFRCAKCGKGLESTTLADKDGEIYCKG
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: KCGVCQKTVYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVAVHGEEIYCKS
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: KKCGVCQKTVYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVAVHGEEIYCKSCYGKKYG
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: CPRCSQAVYAAEKVIGAGKSWHKSCFRCAKCGKGLESTTLADKDGEIYCKGCYAKN
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: CGVCQKTVYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVAVHGEEIYCKSCYGK
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: ERCPRCSQAVYAAEKVIGAGKSWHKSCFRCAKCGKGLESTTLADKDGEIYCKGCYAKNFG
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: CGVCQKTVYFAEEVQCEGNSFHKSCFLCMVCKKN
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type
Protein sequence:
MKIKVTFQERIIEHNFETEITNLQQVTQKLCSLFLITNYYSYSLFLSSGQLVDNINLIDEGSEIIIKHLNRLGTISIGSGYSNSVVGTTNNNAPSSPSSSININGQQIQQQIQQQIQQQQQQQQQQQQQVQLSPDTLINNLLNNLKDNTFKKKAFFDLKDLKEEILIKKFVEKNGIEVIVCQLKELTGNTLSYALSALQTIMSYEFTITSMTSTDTASLITQLLPLTENTSNPSISKTSLSLLCLFLNQSNNLNFKQFSSTLVLEYNEKTKRNYNHTLVQLLSSSNTVDVQLNALTLINIIIGKTMSTTIPGLENGSVTGGENGFNKLLKELDEYEINQKLKKLVESIIVAPELKRQLYIYQRHRFQVITNRKNVTFNKESSEHDALLMKLWSLTYPGVKLESRVSEQWKQMGFQGTDPCTDFRAMGIWGLDNLIYFAQNYNEKFRKIVNSQIDRKEREYPTATAGIVLTFELYNSIFKMGTPNLNPYNSTTSNTTSNTTSTTNIDDLPFFPLFFSHPHAFEEVYCTTFQILDSTWDDMNGTYMHFQKIMSSVKNLIITALESKPTTLEAFDWKCQKNTKNSNGGTNSNQNNSSSNLLLSNFANGSSLLSLLNDLSSSSRDDMKKLLTGVNYQVLDLIKSQKISYFQEGFQFKLHKQLKTKQSLPLNWIFIRLFNNNNNNNNNNENCSYEIQYCFLSTELNQPPLPNQSIPTNYNTIKISDLFFNGESTNSNNKKKDKSLSYFNISIKDEQIQSLIQNQLPLSNLNNSSNSLQLDSSTSMNSIKDSIINISSSNNNIKDNLTNNNTNTNTNNTNNNTSNGNGNSNSVSMSSININNSGQLSPNTTSPILIPQQQQQQPQSSSLSVQHQQSSTPTPSSPVLLSSPSLQSSSSSSSSSSNPNLFTIDLISSNRDDVSNFWDSIKLLSGQEIKSQEGLDDYHSLLSINTSVKLLDLDGIDIPKETPQIPILPDNFDFRTV

Annotated regions:
phrase: GNTLSYALSALQTIMSYEFTITSMTSTDTASLITQLLPLTENTSNPSISKTSLSLLCLFLNQSNNLNFKQFSSTLVLEYNEKTKRNYNHTLVQLLSSSNTVDVQLNALTLINIIIG
type: DOMAIN
name: FH3_FHOD1-3-like
description: FHOD1/3-like, FH3 domain

phrase: VITNRKNVTFNKESSEHDALLMKLWSLTYPGVKLESRVSEQWKQMGFQGTDPCTDFRAMGIWGLDNLIYFAQNYNEKFRKIVNSQIDRKEREYPTATAGIVLTFELYNSIFKMGTPNLNPYNSTTSNTTSNTTSTTNIDDLPFFPLFFSHPHAFEEVYCTTFQILDSTWDDMNGTYMHFQKI
type: DOMAIN
name: ELMO_dom
description: ELMO domain

phrase: EHDALLMKLWSLTYPGVKLESRVSEQWKQMGFQGTDPCTDFRAMGIWGLDNLIYFAQNYNEKFRKIVNSQIDRKEREYPTATAGIVLTFELYNSIFKMGTPNLNPYNSTTSNTTSNTTSTTNIDDLPFFPLFFSHPHAFEEVYCTTFQILDSTWDDMNGTYMHFQKIMSSVKNLIITA
type: DOMAIN
name: ELMO_dom
description: ELMO domain
Protein sequence:
MQNQQIRIRLKAFDHRLIDQSTQEIVETAKRTGAQVRGPIPLPTRKERYTVLISPHVNKDARDQYEIRTHKRVLDIVQPTDKTVDALMKLDLAAGVEVQISLG

Annotated regions:
phrase: AKRTGAQVRGPIPLP
type: CONSERVED_SITE
name: Ribosomal_uS10_CS
description: Small ribosomal subunit protein uS10, conserved site

phrase: RIRLKAFDHRLIDQSTQEIVETAKRTGAQVRGPIPLPTRKERYTVLISPHVNKDARDQYEIRTHKRVLDIVQPTDKTVDALMKLDLAAGVEVQ
type: DOMAIN
name: Ribosomal_uS10_dom
description: Small ribosomal subunit protein uS10 domain

phrase: RIRLKAFDHRLIDQSTQEIVETAKRTGAQVRGPIPLPTRKERYTVLISPHVNKDARDQYEIRTHKRVLDIVQPTDKTVDALMKLDLAAGVEVQI
type: DOMAIN
name: Ribosomal_uS10_dom
description: Small ribosomal subunit protein uS10 domain
Protein sequence:
MTVKGKVVLAEPRGFCAGVHRAIAMTERALEMHGPPVYVRKQIVHNHYVVASLERRGARFVDEISEVPEGSVCVFSAHGVSPAVREAADQANLDVIDATCPLVSKVHQQAKRATRDGRLLLLIGHNNHEETEGTRGEVPEQTIVVETVEDVDRLGLAPHTPVAYLTQTTLSVDDTAEVVARIRERFHDVAEPASDTICYASQNRQNGIKSLARQCELVLVVGSENSSNSQRMVDVARQAGARSYLVPDVGHLREEWLRDVRTVGVSSGASAPEVLVEQVIERLAEYGYGDVDVDITAVEDVVFSMPQRNQERLLPSVRQPSDLRRMTTPELTRLAGEIRTLLIEQVSRTGGHLGPSLGVVELTLGLHRVFDSPADRILWDTGHQAYVHKVLTGRWQDFGGLRTRDGLSGYPSQEESPHDFIENSHASTALSYAYGMSKADSLRGVTGRRVVAVVGDGSLTGGMAWEALNSIAGEGRPVVIVLNDNGRSYSPTIGGLARHLAGNEPDKFFATLGLQYFGPVDGHDLDAVQDALRSAAEIDGPVVVHVLTRKGYGYELAENDQVDRFHAIKPMNPETGVPVKAGGPSWTSVFADELVRLGGLREDIVAITAAMQDPTGLSRFAERYPARVVDVGIAEQHAVTAAAGMAMAGMRPVVAIYSTFLNRAIDQVLLDVALHSCPVIFVLDRAGVTGDDGPSHNGMWDMSLLNVVPKMRIAAPRDAATLRSALRGALDTVDGPSAIRFPKGEVGAEVPAAFGCAGIDVLRPDPVD

Annotated regions:
phrase: RTLLIEQVSRTGGHLGPSL
type: CONSERVED_SITE
name: Transketolase_CS
description: Transketolase conserved site

phrase: PSWTSVFADELVRLGGLREDIVAITAAMQDPTGLSRFAERYPARVVDVGIAEQHAVTAAAGMAMAGMRPVVAIYSTFLNRAIDQVLLDVALHSCPVIFVLDRAGVTGDDGPSHNGMWDMSLLNVVPKMRIAAPRDAATLRSALRGALDTVDGPSAIRFPKGE
type: DOMAIN
name: Transketolase-like_Pyr-bd
description: Transketolase-like, pyrimidine-binding domain

phrase: PSWTSVFADELVRLGGLREDIVAITAAMQDPTGLSRFAERYPARVVDVGIAEQHAVTAAAGMAMAGMRPVVAIYSTFLNRAIDQVLLDVALHSCPVIFVLDRAGVTGDDGPSHNGMWDMSLLNVVPKMRIAAPRDAATLRSALRGALDTVDGPSAIRFPKGEVG
type: DOMAIN
name: Transketolase-like_Pyr-bd
description: Transketolase-like, pyrimidine-binding domain

phrase: GDDGPSHNGMWDMSLL
type: BINDING_SITE
name: Transketolase_BS
description: Transketolase binding site
Protein sequence:
MNINGYTRMAAVVANPIKHSLSPFIHNLAFDLTNENGVYLAWEVEAEKLPAIVDNVRTLDMYGLNISMPYKTEITPFMDELSPAAELIGAVNTVVNQSGKLIGHNTDGIGFFNSLEKYHFNIQNKQMLILGGGGAAIAIIAQAALSGAKKIVVAARKSASYIPLKEKLEKLSVKTGIEILLTDLSEADRLQKELKQTDLLVNATSVGMDGESLPLEKSLVLPEKLLVVDAIYKVRETPFLRWAKGQGAQTENGLGMLIGQAAESFYLWTGKKMPVAEITLEMEKEA

Annotated regions:
phrase: GLGMLIGQAAESFYLWTGKKMPVA
type: DOMAIN
name: SDH_C
description: SDH, C-terminal

phrase: VVANPIKHSLSPFIHNLAFDLTNENGVYLAWEVEAEKLPAIVDNVRTLDMYGLNISMPYKTEITPFMDELSPAAELIGAVNT
type: DOMAIN
name: Shikimate_DH-bd_N
description: Shikimate dehydrogenase substrate binding, N-terminal
Protein sequence:
MMLPVTSISNSLPRVASSSFGEQAQFERALAQAADSMKNDTASTPVRTAPISPPMDVHRAAPTSPLKDRVLQTISAICPDSIVAAAAPNHKAALISGAPPGPSQKLPVEDGAGTERLGIPQGGHDFDVMVAGLRDLYNGVTQVALVSKGISGITSSVNKLLKEG

Annotated regions:
Protein sequence:
MAHPAQLGLQDASSPIXEELLHFHEDALMIVFLISTLVLYIITTTVST

Annotated regions:
phrase: MAHPAQLGLQDASSPIXEELLHFHEDALMIVFLISTLVLYIITTTVS
type: DOMAIN
name: Cyt_c_oxidase_su2_TM_dom
description: Cytochrome C oxidase subunit II, transmembrane domain

phrase: HPAQLGLQDASSPIXEELLHFHEDALMIVFLISTLVLYIITTT
type: DOMAIN
name: Cyt_c_oxidase_su2_TM_dom
description: Cytochrome C oxidase subunit II, transmembrane domain
Protein sequence:
MSDLQGGYKRGELTVHHDPSVLTRVSKALRGVGRQVALVPTMGALHTGHLELVRQAKLTGAVVIVSIFVNPLQFGAGEDLDAYPRTLDADLELLREAGVELAFVPTAATMYPAGPRTTIHPGPLGAELEGVSRPTHFAGMLTVVAKLLQIAAPNVAYFGEKDYQQLTLIRQMVTDLNFDVRIFGVPTVREHDGLALSSRNRYLDEAQRSAATALSAALIAGAHAAAGGAEAILATAREVLASVPEVEVDYLEVRGVDLGPAPERGDGRLLVAAKVGTTRLIDNVGVAVGTGFLERDAEPPSDASAADELLSR

Annotated regions:
Protein sequence:
MEVTNLIEKCTKHSKDFATEVKKLWNDELSSESGLSRKTRNVIRNILRDITKSLTTDKKSKCFRILERSTINGEQIKDVYKTIFNNGVDVESRINTTGKYVLFTVMTYVAAELRLIKSDEIFALLSRFFNMICDIHRKYGCGNMFVGIPAALIILLEIDHINKLFSVFSTRYDAKAYLYTEYFLFLNINHYLLSGSDLFINVAYGAVSFSSPISVPDYIMEALTFKACDHIMKSGDLKYTYAFTKKVKDLFNTKSDSIYQYVRLHEMSYDGVSEDTDDDDEVFAILNLSIDSSVDRYRNRVLLLTPEVASLRKEYSDVEPDYKYLMDEEVPAYDKHLPKPITNTGIEEPHATGGDEDQPIKVVHPPNNDKDDAIKPYNPLEDPNYVPTITRTAIGIADYQLVINKLIEWLDKCEEECGNSGEFKTELEEAKRKLTELNAELSDKLSKIRTLERDSVYKTERIDRLTKEIKEHRDIQNGTDDGSDLLEIDKKTIRELRESLDREREMRSELEKELDTIRNGKVDGSCQRELELSRMWLKQRDDDLRAEIDKRRNVEWELSRLRRDIKECDKYKEDLDKAKTTISNYVSKISTLESEIAKYQQDRDTLSVVRRELEEERRRVRDLESRLDECTRNQEDTQEVDALRSRIRELENKLTDCIESGGGNLTEISRLQSKISDLERQLSECRENATEISRLQSRISDLERQLNDCRRNNETNAETERDATS

Annotated regions:
phrase: QEVDALRSRIRELENKLTDCI
type: REPEAT
name: Pox_A_type_inc
description: Viral A-type inclusion protein repeat

phrase: TEISRLQSKISDLERQLSECRE
type: REPEAT
name: Pox_A_type_inc
description: Viral A-type inclusion protein repeat

phrase: RELEEERRRVRDLESRLDECTR
type: REPEAT
name: Pox_A_type_inc
description: Viral A-type inclusion protein repeat

phrase: TEISRLQSRISDLERQLNDCRR
type: REPEAT
name: Pox_A_type_inc
description: Viral A-type inclusion protein repeat
Protein sequence:
MSASQDSRSRDNGPDGMEPEGVIESNWNEIVDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI

Annotated regions:
phrase: FDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRI
type: DOMAIN
name: EIF4A_DEADc
description: ATP-dependent RNA helicase eIF4A, DEAD-box helicase domain

phrase: GFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQ
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: GIRQFYINVEREEWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADL
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: AIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVL
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: DSFDDMNLSESLLRGIYAYGFEKPSAIQ
type: DOMAIN
name: RNA_helicase_DEAD_Q_motif
description: RNA helicase, DEAD-box type, Q motif

phrase: DWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRF
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: KLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRF
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: ILPCIKGYDVIAQAQSGTGKTATFAISILQQIELDLKATQALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEVQKLQMEAPHIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQKLNSNTQVVLLSATMPSDVLEVTKKFMRDPIR
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: VLDEADEM
type: CONSERVED_SITE
name: RNA-helicase_DEAD-box_CS
description: ATP-dependent RNA helicase DEAD-box, conserved site
Protein sequence:
MFRTCTKIGTVPKVLVNQKGLIDGLRRVTTDATTSRANPAHVPEEHDKPFPVKLDDSVFEGYKIDVPSTEIEVTKGELLGLYEKMVTIRRLELACDALYKAKKIRGFCHLSIGQEAVAAGIEGAITLDDSIITSYRCHGFAYTRGLSIRSIIGELMGRQCGASKGKGGSMHIFAKNFYGGNGIVGAQIPLGAGIGFAQKYLEKPTTTFALYGDGASNQGQAFEAFNMAKLWGLPVIFACENNKYGMGTSAERSSAMTEFYKRGQYIPGLLVNGMDVLAVLQASKFAKKYTVENSQPLLMEFVTYRYGGHSMSDPGTTYRSREEVQKVRAARDPIEGLKKHIMEWGVANANELKNIEKRIRGMVDEEVRIAEESPFPDPIEESLFSDVYVAGTEPAYARGRNSLEYHQYK

Annotated regions:
phrase: EKMVTIRRLELACDALYKAKKIRGFCHLSIGQEAVAAGIEGAITLDDSIITSYRCHGFAYTRGLSIRSIIGELMGRQCGASKGKGGSMHIFAKNFYGGNGIVGAQIPLGAGIGFAQKYLEKPTTTFALYGDGASNQGQAFEAFNMAKLWGLPVIFACENNKYGMGTSAERSSAMTEFYKRGQYIPGLLVNGMDVLAVLQASKFAKKYTVENSQPLLMEFVTYRYGGHSMSDPGTTYRSREEVQKVRAARDPIEGLKKHIMEWGVANANELKNIEKRIRGMVDEEVRIAEESPFPD
type: DOMAIN
name: DH_E1
description: Dehydrogenase, E1 component
Protein sequence:
MSRTKSSKRWLQEHFDDVYVKKAQAEGYRSRAVYKLKEIDDKESLIKPGMTVVDLGAAPGGWTQYASEKMKGSGRLVALDILPMDALPNVEFILGDFREDNVLQELINLIPQRTLDLLLSDMAPNMSGSSAIDIPRAMYLVELAFDFAEKMLKPGGNMLVKIFHGSGFDELVKQARASFEKVVIRKPSASRSRSKETYLLAKGYNL

Annotated regions:
phrase: YRSRAVYKLKEIDDKESLIKPGMTVVDLGAAPGGWTQYASEKMKGSGRLVALDILPMDALPNVEFILGDFREDNVLQELINLIPQRTLDLLLSDMAPNMSGSSAIDIPRAMYLVELAFDFAEKMLKPGGNMLVKIFHGSGFDELVKQARASFEKVVIRKPSASRSRSKETYLLAKG
type: DOMAIN
name: RNA_MeTrfase_FtsJ_dom
description: Ribosomal RNA methyltransferase, FtsJ domain
Protein sequence:
MINVESPLNLETTLGSLQFSHGSVQNIGMSISMIIGCELGDKSFIVTALLAYQYGRASVFFGSYLALFFMTSFAVLVGRAAPFLFPKSITHILGGTLFLIFGVKMLKESKEVRESQQSLENEFDKVEKIIVNEEDMKKTLELGLPASNRSSSTLKDKFFKVFSMSCFKNLFSKKFSRAFIKAFALIFVSELGDRSQIATIVMSAKEKVLDVFIGVNIGHMLCTMVAVIVGRYISNKIEMYKVLFFGGIVFMIFGILYIFQGF

Annotated regions:
Protein sequence:
MDAQFEKAIEIAFDPRSSHALKSQALEFLNQVRTDVQAWRICAALFTRSPRASDIVRHVSLEMVNNAVHSQGLDAPDLAFVKNSLLDYITRTYGPNAQDQADPANVQNKLTQTLTYLFVALYGEGWETFFDDFLALTSSQNGASRDNLSGVMLYLRILSSVHDEIADLMISRQGNESKRNNDLKDLIRERHMQKIAMSWQDILAQWTNKHDGVVELTLKVIGKWVSWIDISLVVSQDMQNLILPLVGRVNNTSNNIDTVRDTAIDTLTEIVAKKMGPSHKMELISFLNLGGIITELLASQGLHEFKGTSRYDNDLAEVVAKLLNTIMTDVVRVLEDNKVDAETRAKAERHLQDFLPALLRLFSDEFDEVCSTVIPSLTDLLTFLRRVGTLPDSYSQMLRPILSAIVAKMRYDETSSWGTEDGESDEAEFQELRKRLQILQKSVAAVDQTLYIEFLSNLVGNMFATLEQQGPQMDWRDLDLALHEIYLFGELALPNAGLAHKSEPNVVATERLAVMMSKMVESGIANFPHPAILLQYMEICVRYHAFFESHHQYIAPVLENFVHLIHHEHPRVRTRSWYLFLRFVKQLRAQVGNVAKTVIQSISDLLPIKAEVPSTEAEDDMSSDESDHSADAIFNGQLYLFEAIGCISSTSTTPETDQALYARSVMEPLFSDMSVHLPRAKSGDAQAILQIHHIIMALGTLANGFADPNQSQNPNNQRTPPQAVSAEFSRASEAILVALNELNTNGEIRAACRSAFSRLLGVLGATILPQLPQWIEGLLSQSSSKDEMAFFLRLLEQIVYNFKGEIYNILDLLLTPLLQRVFAGLSEPINGTDDEIQLQELRREYVSFVQVILINELGGVLVSTSNQGVFESLVNSIMTIAKTIVHGNIVASRISFNVLARMAQQWGGPDVATIGENPTANGVPAPAFPGFDQFMLTQFHAACWEVMQDINFRPYADAQTRQILNEITGLEQIIYLKTGEKFISHCQTVTFPAVGMGAEDFLRALTSSTDRKAVMAYLQQLLKSRR

Annotated regions:
phrase: ANVQNKLTQTLTYLFVALYGEGWETFFDDFLALTSSQNGASRDNLSGVMLYLRILSSVHDEIADLMISRQGNESKRNNDLKDLIRERHMQKIAMSWQDILAQWTNKHDGVVELTLKVIGKWVSWIDISLVVSQDMQNLILPLVGRVNNTSNNIDTVRDTAIDT
type: DOMAIN
name: Exportin-1/Importin-b-like
description: Exportin-1/Importin-beta-like

phrase: ETRAKAERHLQDFLPALLRLFSDEFDEVCSTVIPSLTDLLTFLRRVGTLPDSYSQMLRPILSAIVAKMRYDETSSWGTEDGESDEAEFQELRKRLQILQKSVAAVDQTLYIEFLSNLVGNMFATLEQQGPQMDWRDLDLALHEIYLFGELALPNAGLAHKSEPNVVATERLAVMMSKMVESGIANFPHPAILLQYMEICVRYHAFFESHHQYIAPVLENFVHLIHHEHPRVRTRSWYLFLRFVKQLRAQVGNVAKTVIQSISDLLPIKAEVPSTEAEDDMSSDESDHSADAIFNGQLYLFEAIGCISSTSTTPETDQALYARSVMEPLFSDMSVHLPRAKSGDAQAILQIHHIIMALGTLANGFADPNQSQNPNNQRTPPQAVSAEFSRASEAILVALNELNTNGEIRAACRSAFSRLLGVLGATILPQLPQWIEGLLSQSSSKDEMAFFLRLLEQIVYNFKGEIYNILDLLLTPLLQRVFAGLSEPINGTDDEIQLQELRREYVSFVQVILINELGGVLVSTSNQGVFESLVNSIMTIAKTIVHGNIVASRISFNVLARMAQQWGGPDVATIGENPTANGVPAPAFPGFDQFMLTQFHAACWEVMQDINFRPYADAQTRQILNEITGLEQIIYLKTGEKFISHCQTVTFPAVGMGAEDFLRALTSSTDRKAVMAYLQQLLK
type: DOMAIN
name: Exportin-T_C
description: Exportin-T, C-terminal domain
Protein sequence:
MDASKSKALEAALSQIDRQFGKGTVMRLGDKGREKMPAISTGSLGLDVALGIGGLPKGRIVEIYGPESSGKTTLTLQVIAEAQRQGGTCAFVDAEHALDPVYAEKLGVNVDDLIISQPDNGEQALEVADMLVRSGAVDVLVVDSVAALTPKAEIEGDMGDHHVGLQARLMSQALRKITGNIKNANCLAIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRIGSVKEGDEVVGSDTRVKVVKNKVAPPFKQAEFQILYGQGINRLGEIVDFGVKLGLIDKAGAWYSYNGDKIGQGKANAMQYLRDNKEVAEFLEQKIKAELLGDIKPVAKEGAEVEEESAEQE

Annotated regions:
phrase: GVMFGNPETTTGGNALKFYSSVRLDIRRIGSVKEGDEVVGSDTRVKVVKNKVAPPFKQAEFQILYGQGINRLG
type: DOMAIN
name: RecA_monomer-monomer_interface
description: DNA recombination and repair protein RecA, monomer-monomer interface

phrase: ALKFYSSV
type: CONSERVED_SITE
name: DNA_recomb/repair_RecA_CS
description: DNA recombination/repair protein RecA, conserved site

phrase: KMPAISTGSLGLDVALGIGGLPKGRIVEIYGPESSGKTTLTLQVIAEAQRQGGTCAFVDAEHALDPVYAEKLGVNVDDLIISQPDNGEQALEVADMLVRSGAVDVLVVDSVAALTPKAEIEGDMGDHHVGLQARLMSQALRKITGNIKNANCLAIFINQ
type: DOMAIN
name: RecA_ATP-bd
description: DNA recombination and repair protein RecA-like, ATP-binding domain

phrase: KALEAALSQIDRQFGKGTVMRLGDKGREKMPAISTGSLGLDVALGIGGLPKGRIVEIYGPESSGKTTLTLQVIAEAQRQGGTCAFVDAEHALDPVYAEKLGVNVDDLIISQPDNGEQALEVADMLVRSGAVDVLVVDSVAALTPKAEIEGDMGDHHVGLQARLMSQALRKITGNIKNANCLAIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRIGSVKEGDEVVGSDTRVKVVKNKVAPPFKQAEFQILYGQGI
type: DOMAIN
name: RecA-like_N
description: RecA-like, N-terminal

phrase: KGRIVEIYGPESSGKTTLTLQVIAEAQRQGGTCAFVDAEHALDPVYAEKLGVNVDDLIISQPDNGEQALEVADMLVRSGAVDVLVVDSVAALTPKAEIEGDMGDHHVGLQARLMSQALRKITGNIKNANCLAIFINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRI
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: GEIVDFGVKLGLIDKAGAWYSYNGDKIGQGKANAMQYLRDNKEVAEFLEQKIKAE
type: DOMAIN
name: RecA-like_C
description: RecA-like, C-terminal
Protein sequence:
MSQVILDLQLACEDNSGLPEESQFQTWLNAVIPQFQEESEVTIRVVDTAESHSLNLTYRGKDKPTNVLSFPFEVPPGMEMSLLGDLVICRQVVEKEAQEQGKPLEAHWAHMVVHGSLHLLGYDHIEDDEAEEMEAIETEIMLALGYEDPYIAEKE

Annotated regions:
phrase: HGSLHLLGYD
type: CONSERVED_SITE
name: YbeY_CS
description: Endoribonuclease YbeY, conserved site