nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MKSLLKFITCGSVDDGKSTLIGHMLYDAKLLFTDQEKALEMDSRVGSREGKIDYSLLLDGLMAEREQGITIDVAYRYFTTENRSFIVADTPGHEQYTRNMAVGASFADLAVILVDARQGVLSQTKRHARICSLMGIRHFVLAVNKMDLISYNMHRFQEIKDSFLQFTANMNLESVQVIPVSASEGDNITKPSPNTPWYKELPLLPYLEEKDVTTQAEMKGFVMPVQRVARPNHEFRGFQGQVESGSLKIGDEIVTLPSNETAKVKGLLVTDREVEEVVVGQPITVQLDREVDVSRGCVLVKEAQPEMADMFTATILWMDDMELVAGRNYLIKVGTKVLPAMVMDIKSKIDINTGEHVPADHLFKNEMARCDIALSEKMVFDEFENNKGLGSLILMDRVSNMTSACGVIEHSLRRSTNVVWQDTDITREIRSKQKNQKPLTLWFTGLSGSGKSTLANEVEKRLVAMGKHTMLLDGDNVRHGLNKNLGFKEVDRVENIRRVSEVAKLMNDAGIIAITSFISPYASDRENAREIIGKEYIEIYVSTPLEECEKRDVKGLYKKARSGEIPEFTGVSSPYEAPANPEIEIDTSKHSIDAAADYIMDQLVTYLE

Annotated regions:
phrase: KSLLKFITCGSVDDGKSTLIGHMLYDAKLLFTDQEKALEMDSRVGSREGKIDYSLLLDGLMAEREQGITIDVAYRYFTTENRSFIVADTPGHEQYTRNMAVGASFADLAVILVDARQGVLSQTKRHARICSLMGIRHFVLAVNKMDLISYNMHRFQEIKDSFLQFTANMNLESVQVIPVSASEGDNITKPSPNTPWYKELPLLPYLEEKDVTTQ
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: MAEREQGITIDVAYRYFTTENRSFIVADTPGHEQYTRNMAVGASFADLAVILVDARQGVLSQTKRHARICSLMGIRHFVLAVNKMDLISYNMHRFQEIKDSFLQFTANMNLESVQVIPVSASEGDNIT
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: DGLMAEREQGITIDV
type: CONSERVED_SITE
name: G_TR_CS
description: Tr-type G domain, conserved site

phrase: FTATILWMDDMELVAGRNYLIKVGTKVLPAMVMDIKSKIDINTGEHVPADHLFKNEMARCDIALSEKMVFDEFENNKGLGSLILMDRVSNMTSACGVI
type: DOMAIN
name: GTP-eEF1A_C
description: GTP-eEF1A, C-terminal domain

phrase: KFITCGSVDDGKS
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: EQGITIDV
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: IVADTPGHEQ
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: VGASFADLAVI
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: FVLAVNKMD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: SLLKFITCGSVDDGKSTLIGHMLYDAKLLFTDQEKALEMDSRVGSREGKIDYSLLLDGLMAEREQGITIDVAYRYFTTENRSFIVADTPGHEQYTRNMAVGASFADLAVILVDARQGVLSQTKRHARICSLMGIRHFVLAVNKMDLISYNMHRFQEIKDSFLQFTANMNLESVQVIPVSASEGDNI
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: KFITCGSVDDGKSTLIGHMLYDAKLLFTDQEKALEMDSRVGSREGKIDYSLLLDGLMAEREQGITIDVAYRYFTTENRSFIVADTPGHEQYTRNMAVGASFADLAVILVDARQGVLSQTKRHARICSLMGIRHFVLAVNKMDLISYNMHRFQEIKDSFLQFTANMNLESVQVIPVSASEGDNITKPSPNTPWYKELPLLPYL
type: DOMAIN
name: CysN_GTP-bd
description: Sulfate adenylyltransferase subunit CysN, GTP-binding domain

phrase: EMADMFTATILWMDDMELVAGRNYLIKVGTKVLPAMVMDIKSKIDINTGEHVPADHLFKNEMARCDIALSEKMVFDEFENNKGLGSLILMDRVSNMTSACGV
type: DOMAIN
name: CysN_NoDQ_III
description: Sulfate adenylyltransferase subunit CysN, Domain III

phrase: FVMPVQRVARPNHEFRGFQGQVESGSLKIGDEIVTLPSNETAKVKGLLVTDREVEEVVVGQPITVQLDREVDVSRGCVLV
type: DOMAIN
name: CysN_II
description: Sulfate adenylyltransferase subunit CysN, Domain II
Protein sequence:
MFQVQKELASHEAVIVALFEEEETSSFVQELDKAFEGQLQVLLEEKELSTKKKAISKVHSLGKTEVKRYYFVGLGKKESYTTETLRSALGKTFKTLQAAKVQDAAILLDSFVTEKLDAIDVAHIAAEVQGLGTYELQTYKSDKKDRVELEKFTAITAEDAQEIEAALTVGYVHGRATNSARTLVNMPPNVLTATKLAEYAVELAEKYDMDYKVLEKEEMEELGMGALLAVNQGSVEPPKMIALIYKGKEEWTDVIGFVGKGITYDTGGYSLKPREGMVGMKGDMGGAAAVLGAMEIIGELRPEQNVIAVIPSTDNVVSGTAFKPDDVITSMSGKTIEVLNTDAEGRLALADGITYAKKLGANYLIDVATLTGGVIVALGNHTTGAMTNNEELFEQVLEASMETDESIWQLPIFDRDKERVRNSKFADLNNSPGREGHAVMAGTFLGEFAEDTPWVHLDIAGTSESSGAHDLGPAGATGAMVRTLATLVERFGEE

Annotated regions:
phrase: SARTLVNMPPNVLTATKLAEYAVELAEKYDMDYKVLEKEEMEELGMGALLAVNQGSVEPPKMIALIYKGKEEWTDVIGFVGKGITYDTGGYSLKPREGMVGMKGDMGGAAAVLGAMEIIGELRPEQNVIAVIPSTDNVVSGTAFKPDDVITSMSGKTIEVLNTDAEGRLALADGITYAKKLGANYLIDVATLTGGVIVALGNHTTGAMTNNEELFEQVLEASMETDESIWQLPIFDRDKERVRNSKFADLNNSPGREGHAVMAGTFLGEFAEDTPWVHLDIAGTSESSGAHDLGPAGATGAMVRT
type: DOMAIN
name: Peptidase_M17_C
description: Peptidase M17, leucyl aminopeptidase, C-terminal

phrase: NTDAEGR
type: DOMAIN
name: Peptidase_M17_C
description: Peptidase M17, leucyl aminopeptidase, C-terminal

phrase: IVALFEEEETSSFVQELDKAFEGQLQVLLEEKELSTKKKAISKVHSLGKTEVKRYYFVGLGKKESYTTETLRSALGKTFKTLQAAKVQDAAILLDSFVTEKLDAIDVAHIAAEVQGLGTYELQTYKSD
type: DOMAIN
name: Peptidase_M17_N
description: Peptidase M17, leucyl aminopeptidase, N-terminal
Protein sequence:
MQFDNIDSALMALKNGETIIVVDDENRENEGDLVAVTEWMNDNTINFMAKEARGLICAPVSKDIAQRLDLVQMVDDNSDIFGTQFTVSIDHVDTTTGISAYERTLTAKKLIDPSSEAKDFNRPGHLFPLVAQDKGVLARNGHTEAAVDLAKLTGAKPAGVICEIMNDDGTMAKGQDLQKFKEKHQLKMITIDDLIEYRKKLEPEIEFKAKVKMPTDFGTFDMYGFKATYTDEEIVVLTKGAIRQHENVRLHSACLTGDIFHSQRCDCGAQLESSMKYINEHGGMIIYLPQEGRGIGLLNKLRAYELIEQGYDTVTANLALGFDEDLRDYHIAAQILKYFNIEHINLLSNNPSKFEGLKQYGIDIAERIEVIVPETVHNHDYMETKKIKMGHLI

Annotated regions:
phrase: AKVKMPTDFGTFDMYGFKATYTDEEIVVLTKGAIRQHENVRLHSACLTGDIFHSQRCDCGAQLESSMKYINEHGGMIIYLPQEGRGIGLLNKLRAYELIEQGYDTVTANLALGFDEDLRDYHIAAQILKYFNIEHINLLSNNPSKFEGLKQYGIDIAER
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MSLRVYNTLSGTKEEFTPLVPGRVSMYVCGVTVYDHCHIGHARANVVFDMIYRYLRHAGYDVTYVRNYTDVDDKIINRANQEGVPYNAISERFIAEFDRDMAALGLDLPTHQPKATEHIAEMIDVISRLIEKGFAYAADGDVYFCVEKFDPYLKLSKRNLDEMQAGARIEVGEKKRHPMDFALWKGSKPGEPFWESPWGQGRPGWHIECSAMSMKYLGETFDIHGGGKDLVFPHHENEIAQSEAANGKPFAHYWIHNGFVNINSEKMSKSLGNFFTIKEVLEKYDAEVLRFFLLSAHYRSPIDFSDQNLREAEAGLERIYGTLAGIDENLTKGAEGTAEETDRELAEKAVTFPERFREAMDDDFNTAQALGFVFDLVRSANRVLGEGKGGGSNRALLAEARDRIRKVGAVLGIFTSEPRAFAERLKNRKAAELPITAEEIERLIAERIAARANRDFKRADEIRDSLAAKGIMLLDSPQGTTWKVK

Annotated regions:
phrase: RVYNTLSGTKEEFTPLVPGRVSMYVCGVTVYDHCHIGHARANVVFDMIYRYLRHAGYDVTYVRNYTDVDDKIINRANQEGVPYNAISERFIAEFDRDMAALGLDLPTHQPKATEHIAEMIDVISRLIEKGFAYAADGDVYFCVEKFDPYLKLSKRNLDEMQAGARIEVGEKKRHPMDFALWKGSKPGEPFWESPWGQGRPGWHIECSAMSMKYLGETFDIHGGGKDLVFPHHENEIAQSEAANGKPFAHYWIHNGFVNINSEKMSKSLGNFFTIKEVLEKYDAEVLRFFLLSAHYRSPIDF
type: DOMAIN
name: tRNA-synt_1_cat_dom
description: tRNA synthetases class I, catalytic domain

phrase: RFREAMDDDFNTAQALGFVFDLVRSANRVLGEGKGGGSNRALLAEARDRIRKVGAVLGI
type: DOMAIN
name: Cys-tRNA-synt_Ia_DALR
description: Cysteinyl-tRNA synthetase, class Ia, DALR

phrase: FTPLVPGRVSMYVCGVTVYDHCHIGHARANVVFDMIYRYLRHAGYDVTYVRNYTDVDDKIINRANQEGVPYNAISERFIAEFDRDMAALGLDLPTHQPKATEHIAEMIDVISRLIEKGFAYAADGDVYFCVEKFDPYLKLSKRNLDEMQAGARIEVGEKKRHPMDFALWKGSKPGEPFWESPWGQGRPGWHIECSAMSMKYLGETFDIHGGGKDLVFPHHENEIAQSEAANGKPFAHYWIHNGFVNINSEKMSKSLGNFFTIKEVLEKYDAEVLRFFLLSAHYRSPIDFSDQNLREA
type: DOMAIN
name: tRNA-synt_1_cat_dom
description: tRNA synthetases class I, catalytic domain

phrase: RFREAMDDDFNTAQALGFVFDLVRSANRVLGEGKGGGSNRALLAEARDRIRKVGAVLGIFTSEPRAF
type: DOMAIN
name: Cys-tRNA-synt_Ia_DALR
description: Cysteinyl-tRNA synthetase, class Ia, DALR

phrase: AEEIERLIAERIAARANRDFKRADEIRDSLAAKGIMLLDSPQGTT
type: DOMAIN
name: CysS_C
description: Cysteinyl-tRNA ligase, anticodon binding domain
Protein sequence:
MSRIGKLPISIPAGVTVTLKDDVVTVKGPKGELSQYVNPAINVAIEDGHITLTENENAMLDNPKQKHAFHGLYRSLVHNMVVGVSEGYKKELELVGVGYRASNQGNIIELALGYTHNIFIQLPPEVKVETKSERNKNPLILLESCDKQLLGQVCSKIRSFRKPEPYKGKGIKFVGEEIRRKSGKSAGAK

Annotated regions:
phrase: VGVGYRASNQGNIIELALGYTHNIFIQLPPEVKVETKSERNKNPLILLESCDKQLLGQVCSKIRSFRKPEPYKGKGI
type: DOMAIN
name: Ribosomal_uL6_a/b-dom
description: Large ribosomal subunit protein uL6, alpha-beta domain

phrase: IPAGVTVTLKDDVVTVKGPKGELSQYVNPAINVAIEDGHITLTENENAMLDNPKQKHAFHGLYRSLVHNMVVGVSE
type: DOMAIN
name: Ribosomal_uL6_a/b-dom
description: Large ribosomal subunit protein uL6, alpha-beta domain

phrase: PEPYKGKG
type: CONSERVED_SITE
name: Ribosomal_uL6_CS
description: Large ribosomal subunit protein uL6, conserved site
Protein sequence:
MKKDPYLEVKKQLALEAANLVEPGMLLGLGSGSTSREFIKAVAHKHKQENLDIRAVASSKESHSLAKSLGIPLVDDEEFTEIDLAVDGADEIDPQLRMIKGGGGAIFREKILLQSSRRRLILADESKHVQVLGKFGLPIEISPFGRSSIIATLKNLGYLGNLRKNSHGGFFITNNRNYIYDIHTPNVYPHPEEDLLKLLQIHGIIEVGFVIASVEVWFGYANGQIGKKNTGRV

Annotated regions:
Protein sequence:
MRVLISNDDGVFAEGIRTLAAAAVARGHDVTVVCPDQERSATGHGLTLQTPIRAERADELFVPGVTAWACSGTPADCMKLALFELVKDKPDLVLSGINHGPNLGTDVFCSGTVAAAMEGTLEGIPSMAISSACFQWRQFQAGAELAVEVAEQALADQWPENLLLNLNIPPCNRDAMGPLRWTRLSIRRYDEQFSSRVDPRGRAYYWLAGEVVNDLESAGEGPRDWPSDVAQIHANSPSLTPIQPDLFWRGSLSGLPQLKLKDQLVR

Annotated regions:
phrase: VLISNDDGVFAEGIRTLAAAAVARGHDVTVVCPDQERSATGHGLTLQTPIRAERADELFVPGVTAWACSGTPADCMKLALFELVKDKPDLVLSGINHGPNLGTDVFCSGTVAAAMEGTLEGIPSMAISSACFQWRQFQAGAELAVEVAEQALADQWPENLLLNLNIPPCNRDAMGPLRWTRLSIRRY
type: DOMAIN
name: SurE-like_Pase/nucleotidase
description: Survival protein SurE-like phosphatase/nucleotidase

phrase: MRVLISNDDGVFAEGIRTLAAAAVARGHDVTVVCPDQERSATGHGLTLQTPIRAERADELFVPGVTAWACSGTPADCMKLALFELVKDKPDLVLSGINHGPNLGTDVFCSGTVAAAMEGTLEGIPSMAISSACFQWRQFQAGAELAVEVAEQALADQWPENLLLNLNIPPCNRDAMGPLRWTRLSIRRYDEQFSSRVDPRGRAYYWLAGEVVNDLESAGEGPRDWPSDVAQIHANSPSLTPIQP
type: DOMAIN
name: SurE-like_Pase/nucleotidase
description: Survival protein SurE-like phosphatase/nucleotidase
Protein sequence:
MKILFWGTPAYAVPTLDTLHEAGHQIVGVVTQPDRRRGRGKQLMPSPVKARAQELGCPVFTPERIRRDLDCQQQLNALDADVSVVVAFGQILPKDILQHPPLGCWNGHGSLLPRWRGAGPIQWSILEGDPETGVGIMAMEEGLDTGPVLLEQRLSINLLENAHQLGERLSRLSADLMLQAMPVIEAAGPGLEAERWSRLQVRHQPEEGTYARMLSKEDFQLNWGDSALTIHRKVMGLYPGAVTVWKDRRLKVLATEPLIERLADDLSDEARALVGRWNTGAHPPGQVLHSADSGLVVSTHGCPILIREAQLEGKARSHGQALIQQLQAQPGDSLGLAAKP

Annotated regions:
phrase: EDFQLNWGDSALTIHRKVMGLYPGAVTVWKDRRLKVLATEPLIERLADDLSDEARALVGRWNTGAHPPGQVLHSADSGLVVSTHGCPILIREAQLEGKA
type: DOMAIN
name: Met-tRNA-FMT_C
description: Methionyl-tRNA formyltransferase, C-terminal domain

phrase: LSKEDFQLNWGDSALTIHRKVMGLYPGAVTVWKDRRLKVLATEPLIERLADDLSDEARALVGRWNTGAHPPGQVLHSADSGLVVSTHGCPILIREAQLEGKARSHGQALIQ
type: DOMAIN
name: Formyl_trans_C
description: Formyl transferase, C-terminal

phrase: MKILFWGTPAYAVPTLDTLHEAGHQIVGVVTQPDRRRGRGKQLMPSPVKARAQELGCPVFTPERIRRDLDCQQQLNALDADVSVVVAFGQILPKDILQHPPLGCWNGHGSLLPRWRGAGPIQWSILEGDPETGVGIMAMEEGLDTGPVLLEQRLSINLLENAHQLGERLSRLSADLMLQ
type: DOMAIN
name: Formyl_transf_N
description: Formyl transferase, N-terminal

phrase: MKILFWGTPAYAVPTLDTLHEAGHQIVGVVTQPDRRRGRGKQLMPSPVKARAQELGCPVFTPERIRRDLDCQQQLNALDADVSVVVAFGQILPKDILQHPPLGCWNGHGSLLPRWRGAGPIQWSILEGDPETGVGIMAMEEGLDTGPVLLEQRLSINLLENAHQLGERLSRLSADLMLQAMPVIEAAGPGLEAERWSRLQVRHQPEEGTYARM
type: DOMAIN
name: Met-tRNA-FMT_N
description: Methionyl-tRNA formyltransferase, N-terminal domain
Protein sequence:
MFNKIDEDTEFTMLDSATIATVKSTIPLLAATGPKLTAHFYDRMFEHNPELKDIFNMSNQRNGDQRQALFDAICAYAANIENLAALLPAVERIAQKHTSFTIQPEQYNIVGAHLLATLDEMFSPGQEVLDAWGKAYGVLANVFINREAEIYQDSAEKTGGWRGTREFRIAEKQPQSELITSFLLEPVDGKPVADFQPGQYLAVYIRDASLENQEIRQYSLTQAPNGKTYRIAVKREGEGAVSNFLHNFALPGDIIHLAAPHGDFFMDISDTTPVALISAGVGQTPMLGMLNTLAARGHHAPVQWLHAAENGAVHAFASEVKGAQKNLPQLESHVWYNQPQANDLPGEDYQYEGLMNLSSVSTQLSDPAMHFYLCGPVGFMQFAAKQLLAMNIREANIHYECFGPHKVI

Annotated regions:
phrase: LISAGVGQTPMLGMLNTLAARGHHAPVQWLHAAENGAVHAFASEVKGAQKNLPQLESHVWYNQPQANDLPGEDYQYEGLMNLSSVSTQLSDPAMHFYLCGPVGFMQFA
type: DOMAIN
name: OxRdtase_FAD/NAD-bd
description: Oxidoreductase FAD/NAD(P)-binding

phrase: RIAEKQPQSELITSFLLEPVDGKPVADFQPGQYLAVYIRDASLENQEIRQYSLTQAPNGKTYRIAVKREGEGAVSNFLHNFALPGDIIHLAAPHGD
type: DOMAIN
name: Cbr1-like_FAD-bd_dom
description: Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain

phrase: FQPGQYLAVY
type: DOMAIN
name: Flavoprot_Pyr_Nucl_cyt_Rdtase
description: Flavoprotein pyridine nucleotide cytochrome reductase

phrase: RQYSLTQ
type: DOMAIN
name: Flavoprot_Pyr_Nucl_cyt_Rdtase
description: Flavoprotein pyridine nucleotide cytochrome reductase

phrase: ALISAGVGQTPMLGMLNTL
type: DOMAIN
name: Flavoprot_Pyr_Nucl_cyt_Rdtase
description: Flavoprotein pyridine nucleotide cytochrome reductase

phrase: HFYLCGPV
type: DOMAIN
name: Flavoprot_Pyr_Nucl_cyt_Rdtase
description: Flavoprotein pyridine nucleotide cytochrome reductase

phrase: PLLAATGPKLTAHFYDRMFEHNPELKDIFNMSNQRNGDQRQALFDAICAYAANIENLAALLPAVERIAQKHTSFTIQPEQYNIVGAHLLATLDEMFSPGQEVLDAWGKAYGVLANVFIN
type: DOMAIN
name: Globin
description: Globin

phrase: RGTREFRIAEKQPQSELITSFLLEPVDGKPVADFQPGQYLAVYIRDASLENQEIRQYSLTQAPNGKTYRIAVKREGEGAVSNFLHNFALPGDIIHLAAPHGDFFM
type: DOMAIN
name: FAD-bd_FR_type
description: FAD-binding domain, ferredoxin reductase-type

phrase: HFYDRMFEHNPELKDIFNMSNQRNGDQRQALFDAICAYAANIENLAALLPAVERIAQKHTSFTIQPEQYNIVGAHLLATLDEMFSPGQEVLDAWGKAYGVLAN
type: DOMAIN
name: Globin
description: Globin
Protein sequence:
MGCRHSRLSSCKPPKKKRQEPEPEQPPRPEPHELGPLNGDTAITVQLCASEEAERHQKDITRILQQHEEEKKKWAQQVEKERELELRDRLDEQQRVLEGKNEEALQVLRASYEQEKEALTHSFREASSTQQETIDRLTSQLEAFQAKMKRVEESILSRNYKKHIQDYGSPSQFWEQELESLHFVIEMKNERIHELDRRLILMETVKEKNLILEEKITTLQQENEDLHVRSRNQVVLSRQLSEDLLLTREALEKEVQLRRQLQQEKEELLYRVLGANASPAFPLAPVTPTEVSFLAT

Annotated regions:
Protein sequence:
MTAINRILIVDDEDNVRRMLSTAFALQGFETHCANNGRTALHLFADIHPDVVLMDIRMPEMDGIKALKEMRSHETRTPVILMTAYAEVETAVEALRCGAFDYVIKPFDLDELNLIVQRALQLQSMKKEIRHLHQALSTSWQWGHILTNSPAMMDICKDTAKIALSQASVLISGESGTGKELIARAIHYNSRRAKGPFIKVNCAALPESLLESELFGHEKGAFTGAQTLRQGLFERANEGTLLLDEIGEMPLVLQAKLLRILQEREFERIGGHQTIKVDIRIIAATNRDLQAMVKEGTFREDLFYRLNVIHLILPPLRDRREDISLLANHFLQKFSSENQRDIIDIDPMAMSLLTAWSWPGNIRELSNVIERAVVMNSGPIIFSEDLPPQIRQPVCNAGEVKTAPVGERNLKEEIKRVEKRIIMEVLEQQEGNRTRTALMLGISRRALMYKLQEYGIDPADV

Annotated regions:
phrase: ILTNSPAMMDICKDTAKIALSQASVLISGESGTGKELIARAIHYNSRRAKGPFIKVNCAALPESLLESELFGHEKGAFTGAQTLRQGLFERANEGTLLLDEIGEMPLVLQAKLLRILQEREFERIGGHQTIKVDIRIIAATNRDLQAMVKEGTFREDLFYRLNVIHLILPPLRDRREDISLLANHFLQKFSSENQRDIIDIDPMAMSLLTAWSWPGNIRELSNVIERAV
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: RILIVDDEDNVRRMLSTAFALQGFETHCANNGRTALHLFADIHPDVVLMDIRMPEMDGIKALKEMRSHETRTPVILMTAYAEVETAVEALRCGAFDYVIKPFDLDELNLIVQRA
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: GLFERANEGTLLLDE
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_2
description: Sigma-54 interaction domain, ATP-binding site 2

phrase: ILTNSPAMMDICKDTAKIALSQASVLISGESGTGKELIARAIHYNSRRAKGPFIKVNCAALPESLLESELFGHEKGAFTGAQTLRQGLFERANEGTLLLDEIGEMPLVLQAKLLRILQEREFERIGGHQTIKVDIRIIAATNRDLQAMVKEGTFREDLFYRLNVIH
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: NRILIVDDEDNVRRMLSTAFALQGFETHCANNGRTALHLFADIHPDVVLMDIRMPEMDGIKALKEMRSHETRTPVILMTAYAEVETAVEALRCGAFDYVIKPFDLDELNLI
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: ILIVDDEDNVRRMLSTAFALQGFETHCANNGRTALHLFADIHPDVVLMDIRMPEMDGIKALKEMRSHETRTPVILMTAYAEVETAVEALRCGAFDYVIKPFDLDELNL
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: WPGNIRELS
type: CONSERVED_SITE
name: Sigma_54_int_dom_CS
description: Sigma-54 interaction domain, conserved site

phrase: VLISGESGTGKEL
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_1
description: Sigma-54 interaction domain, ATP-binding site 1

phrase: KRVEKRIIMEVLEQQEGNRTRTALMLGISRRALMYKLQE
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: RIIMEVLEQQEGNRTRT
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: ALMLGISRRALMYKLQEYGI
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: SQASVLISGESGTGKELIARAIHYNSRRAKGPFIKVNCAALPESLLESELFGHEKGAFTGAQTLRQGLFERANEGTLLLDEIGEMPLVLQAKLLRILQEREFERIGGHQTIKVDIRIIAATNRDLQAMVKEGTFREDLFYRLN
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain
Protein sequence:
MADITVAELAKEIGTPVDRLVTQLADSGVNKSATDAISQDEKEALLGHLKKQHGDESEAKPNKLTLNRKTKSTLTMGHGSKAKSVNVEVRKKRTYVKRSEVEDEKLAEEAAKAEAEAAILAEADAKAKAEAAAKEAENEKGVAAAKAEVEAERKAEAKIEAAAKAKIAAVEKAKNVEQAPEKVAETEEAKKLRLAQEKETLAKVEAEAAAAAEAAKKLAEENEGRWKEQEAERKAKEKEVVHLTSSVYAQEAEDKSDSADESGRRRKKKKAPDRNARGRNSGRGKGKTLSSPQSLKHGFTKPVETKLQDIRIGETISVAELANKMSKKGAEVVKAMFKLGAMATINQVIDQETAALVAEDMGFEVVLVKENALEEAVLADRNDTGEEITRAPVVTIMGHVDHGKTSLLDHIREAKVADGEAGGITQHIGAYHVETGHGMITFLDTPGHAAFTAMRSRGAKATDIVVIVVAADDGVMPQTIEAIQHAQASEAPIIIAVNKMDKESADPDRVKSELSQHGVLSEEWGGEVQFCHVSAKTGLGIDELLDSILLQSEVLELTAVVDKMANGVVVESKLDKGRGPVATVLVQEGTLKQGDIVLCGLEYGRVRAMRDENGKTIQSAGPSIPVEIIGLSGVPISGDEATVVKDEKKAREVALFRQGKFRDVKLARQQKAKLENMFASMAEGDISEVNVVIKSDVQGSLEAISDSLLKLSTDEVKVKIIGSGVGAITETDATLAAASNAIVVGFNVRADASARKVIESENIDLRYYSVIYALIEEVKQAMSGMLAPEFKQEIIGLAQVRDVFKSPKIGAIAGCMVTEGVIKRSAPIRVLRENVVIYEGELESLRRFKDDVQEVRNGTECGIGVKNYNDVRVGDQIEVFETIEIKRSL

Annotated regions:
phrase: MADITVAELAKEIGTPVDRLVTQLADSGVNKSATDAISQDEKEALLGHL
type: DOMAIN
name: IF2_N
description: Translation initiation factor IF-2, N-terminal

phrase: ETISVAELANKMSKKGAEVVKAMFKLGAMATINQVIDQETAALVAEDMGF
type: DOMAIN
name: IF2_N
description: Translation initiation factor IF-2, N-terminal

phrase: VVTIMGHVDHGKTSLLDHIREAKVADGEAGGITQHIGAYHVETGHGMITFLDTPGHAAFTAMRSRGAKATDIVVIVVAADDGVMPQTIEAIQHAQASEAPIIIAVNKMDKESADPDRVKSELSQHGVLSEEWGGEVQFCHVSAKTGLGIDELLDSI
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: GAIAGCMVTEGVIKRSAPIRVLRENVVIYEGELESLRRFKDDVQEVRNGTECGIGVKNYNDVRVGDQ
type: DOMAIN
name: EFTu-like_2
description: Translation elongation factor EFTu-like, domain 2

phrase: PVVTIMGHVDHGKTSLLDHIREAKVADGEAGGITQHIGAYHVETGHGMITFLDTPGHAAFTAMRSRGAKATDIVVIVVAADDGVMPQTIEAIQHAQASEAPIIIAVNKMDKESADPDRVKSELSQHGVLSEEWGGEVQFCHVSAKTGLGIDELLDS
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: PNKLTLNRKTKSTLTMGHGSKAKSVNVEVRKKRTYVK
type: DOMAIN
name: IF2_assoc_dom_bac
description: Initiation factor 2 associated domain, bacterial

phrase: ANGVVVESKLDKGRGPVATVLVQEGTLKQGDIVLCGLEYGRVRAMRDENGKTIQSAGPSIPVEIIGLSGVPISGDEAT
type: DOMAIN
name: EF-G-like_DII
description: Elongation factor G-like, domain II

phrase: ANGVVVESKLDKGRGPVATVLVQEGTLKQGDIVLCGLEYGRVRAMRDENGKTIQSAGPSIPVEIIGLSGVPISGDEATVVKDEKKAREVALFR
type: DOMAIN
name: IF2_II
description: Translation initiation factor IF-2, domain II

phrase: KLARQQKAKLENMFASMAEGDISEVNVVIKSDVQGSLEAISDSLLKLSTDEVKVKIIGSGVGAITETDATLAAASNAIVVGFNVRADASARKVIESENIDLRYYSVIYALIEEV
type: DOMAIN
name: TIF_IF2_dom3
description: Translation initiation factor IF- 2, domain 3

phrase: TRAPVVTIMGHVDHGKTSLLDHIREAKVADGEAGGITQHIGAYHVETGHGMITFLDTPGHAAFTAMRSRGAKATDIVVIVVAADDGVMPQTIEAIQHAQASEAPIIIAVNKMDKESADPDRVKSELSQHGVLSEEWGGEVQFCHVSAKTGLGIDELLDSILLQSEVLEL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain
Protein sequence:
MDLFEYQAKGLFAKHNVPTTPGRVTDTAEGARAIATEIGHPVMVKAQVKIGGRGKAGGVKYAATPDDAYEHANNILGLDIKGHVVKKLLVAEASDIAEEYYISFLLDRANRTYLAMCSVEGGMEIEEVAATKPDRLAKVPVDAAKGVDLAFARSIAEQGHLPAEVLDAAAVTISKLWDLFVGEDATLVEVNPLVRTPDDQILALDGKVTLDANADFRHPDHVEFEDRAATDPLELKAKEHDLNYVKLDGQVGIIGNGAGLVMSTLDVVAYAGEKHGGVKPANFLDIGGGASAEVMAAGLDVVLGDSQVKSVFVNVFGGITSCDAVATGIVKALEILGAEANKPLVVRLDGNNVEEGRRILTDANHPLVTLVPTMDEAADKAAELASA

Annotated regions:
phrase: KGLFAKHNVPTTPGRVTDTAEGARAIATEIGHPVMVKAQVKIGGRGKAGGVKYAATPDDAYEHANNILGLDIKGHVVKKLLVAEASDIAEEYYISFLLDRANRTYLAMCSVEGGMEIEEVAATKPDRLAKVPVDAAKGVDLAFARSIAEQGHLPAEVLDAAAVTISKLWDLFVGEDATLVEVNPLVRTPDDQILALDGKVTLDANADFRHPDHV
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold

phrase: NGAGLVMSTLDVVAYAGEKHGGVKPANFLDIGGGASAEVMAAGLDVVLGDSQVKSVFVNVFGGITSCDAVATGIVKALEILGAEANKPLVVRLDGNNVEEGRRILTDANHPLVTLVPTMDEA
type: DOMAIN
name: SUCC_ACL_C
description: ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain

phrase: LFEYQAKGLFAKHNVPTTPGRVTDTAEGARAIATEIGHPVMVKAQVKIGGRGKAGGVKYAATPDDAYEHANNILGLDIKGHVVKKLLVAEASDIAEEYYISFLLDRANRTYLAMCSVEGGMEIEEVAATKPDRLAKVPVDAAKGVDLAFARSIAEQGHLPAEVLDAAAVTISKLWDLFVGEDATLVEVNPL
type: DOMAIN
name: ATP-grasp_succ-CoA_synth-type
description: ATP-grasp fold, succinyl-CoA synthetase-type

phrase: GQVGIIGNGAGLVMSTLDVVAYAG
type: CONSERVED_SITE
name: Succ-CoA_synthase_bsu_CS
description: Succinyl-CoA synthetase, beta subunit, conserved site
Protein sequence:
MEKKQSILSPIIRITFTFLVLCGLVYPLIVTGIAQAVMKDNADGSLIYNDKNEVIGSKLIGQNFTDPRYFQGRVSSIEYKAEASGSNNYAPSNPDLEKRVEKSIEEWKKQNPSVPVTEVPIDLVTNSGSGLDPDISPKAASVQVDRISKLTDIPKEKLNQLIKDQTEGAALGLFGETRVNVLKLNLALQELMK

Annotated regions:
Protein sequence:
MPKTMHFLFRFIVFFYLWGLFTAQRQKKEESTEEVKIEVLHRPENCSKTSKKGDLLNAHYDGYLAKDGSKFYCSRTQNEGHPKWFVLGVGQVIKGLDIAMTDMCPGEKRKVVIPPSFAYGKEGYAEGKIPPDATLIFEIELYAVTKGPRSIETFKQIDMDNDRQLSKAEINLYLQREFEKDEKPRDKSYQDAVLEDIFKKNDHDGDGFISPKEYNVYQHDEL

Annotated regions:
phrase: LEDIFKKNDHDGDGFISPKE
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: GDLLNAHYDGYLAKDGSKFYCSRTQNEGHPKWFVLGVGQVIKGLDIAMTDMCPGEKRKVVIPPSFAYGKEGYAEGKIPPDATLIFEIELYAV
type: DOMAIN
name: PPIase_FKBP_dom
description: FKBP-type peptidyl-prolyl cis-trans isomerase domain

phrase: YQDAVLEDIFKKNDHDGDGFISPKEYNVYQHDE
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: CSKTSKKGDLLNAHYDGYLAKDGSKFYCSRTQNEGHPKWFVLGVGQVIKGLDIAMTDMCPGEKRKVVIPPSFAYGKEGYAEGKIPPDATLIFEIE
type: DOMAIN
name: PPIase_FKBP_dom
description: FKBP-type peptidyl-prolyl cis-trans isomerase domain

phrase: DMDNDRQLSKAE
type: BINDING_SITE
name: EF_Hand_1_Ca_BS
description: EF-Hand 1, calcium-binding site

phrase: DHDGDGFISPKE
type: BINDING_SITE
name: EF_Hand_1_Ca_BS
description: EF-Hand 1, calcium-binding site
Protein sequence:
MAHENVWFSHPRRFGKGSRQCRVCSSHTGLIRKYDLNICRQCFRERASDIGFNKYR

Annotated regions:
phrase: RVCSSHTGLIRKYDLNICRQCF
type: CONSERVED_SITE
name: Ribosomal_uS14_CS
description: Small ribosomal subunit protein uS14, conserved site
Protein sequence:
MSKSSIYGLTYEQLKDWLMEHGQQRFRVDQVWNWLYKKRIHQFSDMKNVNKQTIALLEEHFVLGTLEEEIKQESKDGTIKFLFRLADGNLIETVLMRFNYGLSVCVTTQVGCNIGCSFCASGLLSKSRDLTSGEIVEQIMMVQKHLDTREKDERVSHIVVMGIGEPLDNFTHLMDFIYVVNDDKGLNIGARHITVSTSGLAHKIYQFADTGVQVNLAISLHAPNNELRRSIMKINKAFPIEKLMKSVDYYLEKTNRRITYEYIMLKDVNDHKEEAIQLAKLLKNHRKLAYVNLIPYNPVDEHSHYQRSDSETIQAFFETLKDQGIHCGVRWENGADIDAACGQLRSKQIKKETAK

Annotated regions:
phrase: TTQVGCNIGCSFCASGLLSKSRDLTSGEIVEQIMMVQKHLDTREKDERVSHIVVMGIGEPLDNFTHLMDFIYVVNDDKGLNIGARHITVSTSGLAHKIYQFADTGVQVNLAISLHAPNNELRRSIMKINKAFPIEKLMKSVDYYLEKTNRRITYEYIMLKDVNDHKEEAIQ
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SKSSIYGLTYEQLKDWLMEHGQQRFRVDQVWNWLYKKRIHQFSDMKNVNKQTIALLEEHFVLGTLEEEIKQESKDGTIKFLFRLADGNLIETVLMRFNYGLSVCVTTQVGCNIGCSFCASGLLSKSRDLTSGEIVEQIMMVQKHLDTREKDERVSHIVVMGIGEPLDNFTHLMDFIYVVNDDKGLNIGARHITVSTSGLAHKIYQFADTGVQVNLAISLHAPNNELRRSIMKINKAFPIEKLMKSVDYYLEKTNRRITYEYIMLKDVNDHKEEAIQLAKLLKNHRKLAYVNLIPYNPVDEHSHYQRSDSETIQAFFETLKDQGIHCGVRWENGADIDAACGQLRSKQIKKE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: IYGLTYEQLKDWLMEHGQQRFRVDQVWNWLYKKRIHQFSDMKNVNKQTIALLEEH
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: FNYGLSVCVTTQVGCNIGCSFCASGLLSKSRDLTSGEIVEQIMMVQKHLDTREKDERVSHIVVMGIGEPLDNFTHLMDFIYVVNDDKGLNIGARHITVSTSGLAHKIYQFADTGVQVNLAISLHAPNNELRRSIMKINKAFPIEKLMKSVDYYLEKTNRRITYEYIMLKDVNDHKEEAIQLAKLLKNHRKLAYVNLIPYNPVDEHSHYQRSDSETIQAFFETLKDQGIHCGV
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MSPQTETKAFVGFKAGVKDYKLNYYTPQYQPLDTDILAAFRVTPQPGVPSEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIDPVPGEDNQYICYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPVAYIKTFQGPPHGIQVERDKLNKYGRAILGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEALYKAQAETGEIKGHYLNATAGTCEEMIKRAVFARELGAPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRLSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDYIEIDDDRGIYFTQPWVSTPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGATIIREAAKWSPELAAACEVWKEIKFEFPAVDTLDKKKG

Annotated regions:
phrase: GIQVERDKLNKYGRAILGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEALYKAQAETGEIKGHYLNATAGTCEEMIKRAVFARELGAPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKALRLSGGDHIHAGTVVGKLEGERDITLGFVDLLRDDYIEIDDDRGIYFTQPWVSTPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGATIIREAAKWSPELAAACEV
type: DOMAIN
name: RuBisCO_lsu_C
description: Ribulose bisphosphate carboxylase, large subunit, C-terminal

phrase: YYTPQYQPLDTDILAAFRVTPQPGVPSEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIDPVPGEDNQYICYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPVA
type: DOMAIN
name: RuBisCO_lsu_fd_N
description: Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal

phrase: GLDFTKDD
type: ACTIVE_SITE
name: RuBisCo_large_chain_AS
description: Ribulose bisphosphate carboxylase, large chain, active site