nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MRIFYGLLAFLVARQHDAQAIQARSDKEQPQTVVSGTAVQSVVPVQAQLGSGMGPSSSSSSASSASGGAGNSAFYPLGPNVMCSFLPRDFLDCKDPVDHRENATAQQEKKYGCLKFGGSTYEEVEHAMVWCTVFADIECYGNRTFLRAGVPCVRYTDHYFVTTLIYSMLLGFLGMDRFCLGQTGTAVGKLLTMGGVGVWWIIDVILLITNNLLPEDGSNWNPYV

Annotated regions:
phrase: DHYFVTTLIYSMLLGFLGMDRFCLGQTGTAVGKLLTMGGVGVWWIIDV
type: DOMAIN
name: TM2
description: TM2 domain
Protein sequence:
MPLLVIGTRNKHKVEEITDRWRSLAGQGWCLEDLTGHPGAPEVVEDSDTFAGNAEKKARETALALGHWVLAEDSGLVVPALQGAPGVLSARYAGSHGDDTANNRQVLANLEGITDRRAYYVCHAVVANPQGEVVARAEGRCNGVILAVAKGSGGFGYDPLFLVPEYHATFGELPLVVKQAISHRTRALEGLERQLTRLAPG

Annotated regions:
Protein sequence:
MNKIGVLLMNLGGPERITDVGPFLYNLFSDPEIIRTPFPAFQKPLAWLISTLRSTTSQQAYLSIGGGSPIRRITEQQARELQSKLREKGLNATTYIAMRYWHPFTESAIADMKADCVDQIVVLPLYPHFSISTSGSSFRELKKLRDSDNDFKKIPMRCVRSWFSQSGYLKSMVELISQQISCCESPPNAHIFFTAHGVPKSYVEEAGDPYKQQIEDCSLLIINELEKYLGHSNPHTLSYQSRVGPVEWLKPYTEEVLADLGKSNVEDLIVVPISFVGEHIETLQEIDIEYKEIAEKAGIKNFRRVKALNTHPTFIEGLSDLVISCLEEPQVNIEEASKLPEKVKLYPQEKWQWGWNNSSEVWNGRVAMIVFLVLFIELIAGSGPLHRLGIL

Annotated regions:
phrase: IGVLLMNLGGPERITDVGPFLYNLFSDPEIIRTPFPAFQKPLAWLISTLRSTTSQQAYLSIGGGSPIRRITEQQARELQSKLREKGLNATTYIAMRYWHPFTESAIADMKADCVDQIVVLPLYPHFSISTSGSSFRELKKLRDSDNDFKKIPMRCVRSWFS
type: DOMAIN
name: Ferrochelatase_N
description: Ferrochelatase, N-terminal

phrase: IFFTAHGVPKSYVEEAGDP
type: ACTIVE_SITE
name: Ferrochelatase_AS
description: Ferrochelatase, active site

phrase: MVELISQQISCCESPPNAHIFFTAHGVPKSYVEEAGDPYKQQIEDCSLLIINELEKYLGHSNPHTLSYQSRVGPVEWLKPYTEEVLADLGKSNVEDLIVVPISFVGEHIETLQEIDIEYKEIAEKAGIKNFRRVKAL
type: DOMAIN
name: Ferrochelatase_C
description: Ferrochelatase, C-terminal
Protein sequence:
MVTIRADEISNIIRERIEQYNREVKIVNTGTVLQVGDGIARIHGLDEVMAGELVEFEEGTVGIALNLESNNVGVVLMGDGLLIQEGSSVKATGRIAQIPVSEAYLGRVVNALAKPIDGRGEISASEYRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAEMADSPATLQYLAPYTGAALAEYFMYRERHTSIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSRLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDLLEIGQVRKFLVELRTYLKTNKPKFQEIISSTKTFTEEAEALLKEAIQEQTDRFILQEQA

Annotated regions:
phrase: PAINVGISV
type: ACTIVE_SITE
name: ATPase_a/bsu_AS
description: ATPase, alpha/beta subunit, nucleotide-binding domain, active site

phrase: TGTVLQVGDGIARIHGLDEVMAGELVEFEEGTVGIALNLESNNVGVVLMGDGLLIQEGSSVKAT
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_N
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain

phrase: MKQVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDLLEIGQVRKFLVELRTYLKTNKPKFQEIISSTKTFTEEAEALLKEAIQEQTDR
type: DOMAIN
name: ATP_synth_asu_C
description: ATP synthase, alpha subunit, C-terminal

phrase: IAQIPVSEAYLGRVVNALAKPIDGRGEISASEYRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAEMADSPATLQYLAPYTGAALAEYFMYRERHTSIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSRLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISVSRV
type: DOMAIN
name: ATP_synth_F1_a_nt-bd_dom
description: ATP synthase, F1 complex, alpha subunit nucleotide-binding domain

phrase: GLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVTTFQERGAMEYTIVVAEMADSPATLQYLAPYTGAALAEYFMYRERHTSIIYDDPSKQAQAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLSSRLGEGSMTALPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAGIRPAINVGISV
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_nucl-bd
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain

phrase: QIKAMKQVAGKLKLELAQFAELEAFAQFASDLDKATQNQLARGQRLRELLKQSQSAPLTVEEQIMTIYTGTNGYLDLLEIGQVRKFLVELRTYLKTNKPKFQEIISSTKTFTEEAEALLKEAIQ
type: DOMAIN
name: ATP_synth_asu_C
description: ATP synthase, alpha subunit, C-terminal
Protein sequence:
MEHKVICVLAVVLMLAFGSLAQAQAQAQAQEETCIMAPRERINCGFPGVTAQQCTERGCCFDDSVRGFPWCFHPMAIENTQEEECPF

Annotated regions:
phrase: ETCIMAPRERINCGFPGVTAQQCTERGCCFDDSVRGFPWCFHPMAI
type: DOMAIN
name: P_trefoil_dom
description: P-type trefoil domain

phrase: RINCGFPGVTAQQCTERGCC
type: CONSERVED_SITE
name: P_trefoil_CS
description: P-type trefoil, conserved site

phrase: ETCIMAPRERINCGFPGVTAQQCTERGCCFDDSVRGFPWCFH
type: DOMAIN
name: P_trefoil_dom
description: P-type trefoil domain

phrase: ETCIMAPRERINCGFPGVTAQQCTERGCCFDDSVRGFPWCFHP
type: DOMAIN
name: P_trefoil_dom
description: P-type trefoil domain

phrase: CIMAPRERINCGFPGVTAQQCTERGCCFDDSVRGFPWCFH
type: DOMAIN
name: P_trefoil_dom
description: P-type trefoil domain
Protein sequence:
MAYPLQLGLQDATSPIMEELTSFHDHTLMIVFLISSLVLYIISSMLTTKMTHTNTMDAQGVETIWTILPAAILVLIALPSLRILYMMDEINNPALTVKTMGHQWYWSYEYTDYEDLYFDSYMTPTSDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATISSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENWSASMI

Annotated regions:
phrase: MAYPLQLGLQDATSPIMEELTSFHDHTLMIVFLISSLVLYIISSMLTTKMTHTNTMDAQGVETIWTILPAAILVLIALPSLRILYMMDEI
type: DOMAIN
name: Cyt_c_oxidase_su2_TM_dom
description: Cytochrome C oxidase subunit II, transmembrane domain

phrase: LTVKTMGHQWYWSYEYTDYEDLYFDSYMTPTSDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATISSNRPGLFYGQCSEICGSNHSFMPIVLEM
type: DOMAIN
name: CcO_II-like_C
description: Cytochrome c oxidase subunit II-like C-terminal

phrase: PALTVKTMGHQWYWSYEYTDYEDLYFDSYMTPTSDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATISSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFEN
type: DOMAIN
name: CcO_II_C
description: Cytochrome c oxidase subunit 2, C-terminal

phrase: VLHSWAVPSLGLKTDAIPGRLNQATISSNRPGLFYGQCSEICGSNHSF
type: BINDING_SITE
name: Copper_CuA
description: Copper centre Cu(A)

phrase: NPALTVKTMGHQWYWSYEYTDYEDLYFDSYMTPTSDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATISSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENWSA
type: DOMAIN
name: CcO_II-like_C
description: Cytochrome c oxidase subunit II-like C-terminal

phrase: SPIMEELTSFHDHTLMIVFLISSLVLYIISSMLTTKMTHTNTMDAQGVETIWTILPAAILVLIALPSLRILYMMDEINNPALTVKTMGHQWYWSYEYTDYEDLYFDSYMTPTSDLKPGELRLLEVDNRVVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATISSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKHFENW
type: DOMAIN
name: Cyt_c_oxidase_su2
description: Cytochrome c oxidase, subunit II

phrase: YPLQLGLQDATSPIMEELTSFHDHTLMIVFLISSLVLYIISSMLTTKMTHTNTMDAQGVETIWTILPAAILVLIALPSLR
type: DOMAIN
name: Cyt_c_oxidase_su2_TM_dom
description: Cytochrome C oxidase subunit II, transmembrane domain
Protein sequence:
MSNVRYISNLTRETYALILAGGRGSRLHELTDWRAKPALYFGGKFRIIDFPLSNCINSGIRRVGVVTQYKSHSLIRHVMRGWGHFKKELGESVEILPASQRYSENWYQGTADAVFQNIDIIRHELPKYVMVLSGDHVYRMDYAGLLAAHAESGADMTVSCLEVPIAEAAGSFGVMEVDEEMRILGFEEKPLQPKHSPGNPEMCLASMGNYVFNTEFLFDQLKKDALNESSDRDFGKDIIPAIIEKHNVFAYPFKSAFPNEQAYWRDVGTLDSFWQANMELLSPTPALNLYDAKWPIWTFQEQLPPAKFVFDDDDRRGMALDSIVSGGCIISGATVRRSVLFNEVRVCSYSLVEDSVVLPDVVVLRHCKIKNAILDRGCIIPEGMVIGYNHDHDRAKGFRVSEKGVTLVTRDMLGLPVGYE

Annotated regions:
phrase: ASMGNYVFNT
type: CONSERVED_SITE
name: ADP_Glu_pyroP_CS
description: ADP-glucose pyrophosphorylase, conserved site

phrase: PPAKFVFDDDDRRGMALDSIVSGGCIISGATVRRSVLFNEVRVCSYSLVEDSVVLPDVVVLRHCKIKNAILDRGCIIPEGMVIGYNHDHDRAKGFRVSEKGVTL
type: DOMAIN
name: GlmU/GlgC-like_hexapep
description: Glucose-1-phosphate adenylyltransferase/Bifunctional protein GlmU-like, C-terminal hexapeptide

phrase: AGGRGSRLHELTDWRAKPA
type: CONSERVED_SITE
name: ADP_Glu_pyroP_CS
description: ADP-glucose pyrophosphorylase, conserved site

phrase: ALILAGGRGSRLHELTDWRAKPALYFGGKFRIIDFPLSNCINSGIRRVGVVTQYKSHSLIRHVMRGWGHFKKELGESVEILPASQRYSENWYQGTADAVFQNIDIIRHELPKYVMVLSGDHVYRMDYAGLLAAHAESGADMTVSCLEVPIAEAAGSFGVMEVDEEMRILGFEEKPLQPKHSPGNPEMCLASMGNYVFNTEFLFDQLKKDALNESSDRDFGKDIIPAIIEKHNVFAYPFKSAFPNEQAYWRDVGTLDSFWQANMEL
type: DOMAIN
name: NTP_transferase_dom
description: Nucleotidyl transferase domain

phrase: WYQGTADA
type: CONSERVED_SITE
name: ADP_Glu_pyroP_CS
description: ADP-glucose pyrophosphorylase, conserved site
Protein sequence:
MNVFFMFSLLFLAALESCADVRRNPLEECFREADYEEFLEIARNGLKKTSNPKHVVVVGAGMAGLSAAYVLAGAGHKVTLLEASERVGGRVHTYRNEKEGWYVNLGPMRLPERHRIIREYIRKFGLKLNEFFQENENAWYFIRNIRKRVWEVKKDPGVFKYPVKPSEEGKSASQLYRESLKKVIEELKRTNCSYILNKYDTYSTKEYLIKEGNLSRGAVDMIGDLLNEDSSYYLSFIESLKSDDLFSYEKRFDEIVGGFDQLPISMYQAIAEMVHLNAQVIKIQHNAEKVRVAYQTPAKTLSYVTADYVIVCSSSRAARRIYFEPPLPPKKAHALRSIHYKSGTKIFLTCSKKFWEADGIHGGKSTTDLPSRFIYYPNHNFTSGVGVIVAYTISDDADFFQSLDIKTSADIVINDLSLIHQLPKKEIQALCYPSMIKKWSLDKYAMGSITSFAPYQFQDFIERVAAPVGRIYFAGEYTARVHGWLDSTIKSGLTAARDVNRASQKPSRRQLSNDNEL

Annotated regions:
phrase: MAGLSAAYVLAGAGHKVTLLEASERVGGRVHTYRNEKEGWYVNLGPMRLPERHRIIREYIRKFGLKLNEFFQENENAWYFIRNIRKRVWEVKKDPGVFKYPVKPSEEGKSASQLYRESLKKVIEELKRTNCSYILNKYDTYSTKEYLIKEGNLSRGAVDMIGDLLNEDSSYYLSFIESLKSDDLFSYEKRFDEIVGGFDQLPISMYQAIAEMVHLNAQVIKIQHNAEKVRVAYQTPAKTLSYVTADYVIVCSSSRAARRIYFEPPLPPKKAHALRSIHYKSGTKIFLTCSKKFWEADGIHGGKSTTDLPSRFIYYPNHNFTSGVGVIVAYTISDDADFFQSLDIKTSADIVINDLSLIHQLPKKEIQALCYPSMIKKWSLDKYAMGSITSFAPYQFQDFIERVAAPVGRIYFAGEYTARVHGWLDSTIKSGLTAARD
type: DOMAIN
name: Amino_oxidase
description: Amine oxidase
Protein sequence:
MRLALGLSYRGGAYRGWQSQPDGLTVQDRVEEALARFADRPVRTVCAGRTDAGVHALNQVVHLDTEIEREPFSWVRGTNRYLPPDIAVQWCRPVDAAFHARNSARGRRYAYLLLESPVRPAIEAGAVGWVFRPLDATPMREAAAHLIGEHDFSAFRSAECQAASPVKNLRRIEIVRCGAYWRFEFEASAFLHHMVRNLMGCLLAVGQGVRAPQWLAEVLAAGDRRRAAPTFAPDGLYFLGPQYDANLDLPERTPAFDWLP

Annotated regions:
phrase: AAAHLIGEHDFSAFRSAECQAASPVKNLRRIEIVRCGAYWRFEFEASAFLHHMVRNLMGCLLAVGQGVRAPQWLAEVLAAGDRRRAAPTFAPDGLYFLGPQY
type: DOMAIN
name: PsdUridine_synth_TruA_a/b_dom
description: Pseudouridine synthase I, TruA, alpha/beta domain

phrase: YRGGAYRGWQSQPDGLTVQDRVEEALARFADRPVRTVCAGRTDAGVHALNQVVHLDTEIEREPFSWVRGTNRYLPPDIAVQWCRPVDAAFHA
type: DOMAIN
name: PsdUridine_synth_TruA_a/b_dom
description: Pseudouridine synthase I, TruA, alpha/beta domain
Protein sequence:
MEDFFNCLRSRGFERTDEPLPSDSRRIVVHGVGGSGKTSLIEAFAIANEWVRAYTLTSHERFDISGRGISQYKGQPIDEKLWTILDEYGQTDNPETLPPFNVLATDPYQAFRCQPLRAHFVSLRSYRVPHHIAQAITQYTGFPIEAAGTDLHEGKYTVGPWTDKLRQQILVEDGEIHYQLSRRQCPHKLITDAIGEQWPTVTVVFDRSISPESARPLRCLFYIAATRSSNELNIRTYVPTRTPGLIKASLPHTSCRLCCRPRDLPSEN

Annotated regions:
phrase: IVVHGVGGSGKTSLIEAFAIANEWVRAYTLTSHERFDISGRGISQYKGQPIDEKLWTILDEYGQTDNPETLPPFNVLATDPYQAFRCQPLRAHFVSLRSYRVPHHIAQAITQYTGFPIEAAGTDLHEGKYTVGPWTDKLRQQILVEDGEIHYQLSRRQCPHKLITDAIGEQWPTVTVVFDRSISPESARPLRCLFYIAATRSSNELNIR
type: DOMAIN
name: (+)RNA_virus_helicase_core_dom
description: (+) RNA virus helicase core domain

phrase: MEDFFNCLRSRGFERTDEPLPSDSRRIVVHGVGGSGKTSLIEAFAIANEWVRAYTLTSHERFDISGRGISQYKGQPIDEKLWTILDEYGQTDNPETLPPFNVLATDPYQAFRCQPLRAHFVSLRSYRVPHHIAQAITQYTGFPIEAAGTDLHEGKYTVGPWTDKLRQQILVEDGEIHYQLSRRQCPHKLITDAIGEQWPTVTVVFDRSISPESARPLRCLFYIAATRSSNELNIRTYVPTRTPGLIKASLPHTSCRLCCRPRDLPSE
type: DOMAIN
name: (+)RNA_virus_helicase_core_dom
description: (+) RNA virus helicase core domain
Protein sequence:
MAPPPFRPENAIKRADELISVGEKQAALQSLHDFITARRIRWATPSTVEPVVFKFLEIGVELKKGKLLKDGLHQYKKLIQGSTEGLVSVGAVARKFIDLVESKIASEQTRADELQKQEIDDDLEGGVTPENLLISVYESDQSVAGFNDEAITSWLRFTWESYRAVLDLLRNNALLEITYSGVVKKTMHFCLKYQRKNEFKRLAEMLRQHLDAANYQQSKSGNNLVDLSDADTLQRYLDQRFQQVDVSVKLELWHEAYRSIEDVFHLMKISKRAPKPSTLANYYENLVKVFFVSGDPLLHTTAWKKFYKLYSTNPRATEEEFKTYSSTIFLSAISTQLDEIPSIGYDPHLRMYRLLNLDAKPTRKEMLQSIIEDESIYGKVDEELKELYDIIEVNFDVDTVKQQLENLLVKLSSKTYFSQYIAPLRDVIMRRVFVAASQKFTTVSQSELYKLATLPAPLDLSAWDIEKSLLQAAVEDYVSITIDHESAKVTFAKDPFDIFASTASKEVSEEENTEPEVQEEKEETDEALGPQETEDGEEKEEESDPVIIRNSYIHNKLLELSNVLHDVDSFNNASYMEKVRIARETLIKKNKDDLEKISKIVDERVKRSQEQKQKHMEHAALHAEQDAEVRQQRILEEKAAIEAKLEEEAHRRLIEKKKREFEAIKEREITKMITEVNAKGHVYIDPNEAKSLDLDTIKQVIIAEVSKNKSELESRMEYAMKKLDHTERALRKVELPLLQKEVDKLQETDTANYEAMKKKIVDAAKAEY

Annotated regions:
phrase: QYIAPLRDVIMRRVFVAASQKFTTVSQSELYKLATLPAPLDLSAWDIEKSLLQAAVEDYVSITIDHESAKVTFAKDPFDIFASTASK
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain

phrase: ENAIKRADELISVGEKQAALQSLHDFITARRIRWATPSTVEPVVFKFLEIGVELKKGKLLKDGLHQYKKLIQGSTEGLVSVGAVARKFIDLVESKIASEQTRADELQKQEIDDDLEGGVTPENLLISVYESDQSVAGFNDEAITSWLRFTWESYRAVLDLLRNNALLEITYSGVVKKTMHFCLKYQRKNEFKRLAEMLRQHLDAANYQQSKSGNNLVDLSDADTLQRYLDQRFQQVDVSVKLELWHEAYRSIEDVFHLMKISKRAPKPSTLANYYENLVKVFFVSGDPLLHTTAWKKFYKLYSTNPRATEEEFKTYSSTIFLSAISTQLDEIPSIGYDPHLRMYRLLNLDAKPTRKEMLQSIIEDESIYGKVDEELKELYDIIEVNFDV
type: DOMAIN
name: eIF3a_PCI_TPR-like
description: eIF3a, PCI domain, TPR-like region

phrase: FKTYSSTIFLSAISTQLDEIPSIGYDPHLRMYRLLNLDAKPTRKEMLQSIIEDESIYGKVDEELKELYDIIEVNFDVDTVKQQLENLLVKLSSKTYFSQYIAPLRDVIMRRVFVAASQKFTTVSQSELYKLATLPAPLDLSAWDIEKSLLQAAVEDYVSITIDHESAKVTFAKDP
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain
Protein sequence:
MNKKNQWIVGINAVVSSIENDAEHVREVLVEAASKNSRLLDIEENARRKGIEVRRVTTQALDGVGGGVRHQGVAARYAAVRLWEEHDLKDLVDAAGGQALLLVLDGVQDPHNLGACLRSAAAAGVTAVIIPKDKSVGINATVRKTSSGAADRLPVIAVVNLARSLRELQKQDVWIYGLAGEVETSLYALDLRGNVALVLGGEADGLRRLTREHCDVLARIPMPGEVESLNVSVAAGVTLFEAVRQRTLV

Annotated regions:
phrase: WIVGINAVVSSIENDAEHVREVLVEAASKNSRLLDIEENARRKGIEVRRVTTQALDGVGGGVRHQGVAARYAAVRL
type: DOMAIN
name: SpoU_subst-bd
description: RNA 2-O ribose methyltransferase, substrate binding

phrase: WIVGINAVVSSIENDAEHVREVLVEAASKNSRLLDIEENARRKGIEVRRVTTQALDGVGGGVRHQGVAARYAAV
type: DOMAIN
name: SpoU_subst-bd
description: RNA 2-O ribose methyltransferase, substrate binding

phrase: LLLVLDGVQDPHNLGACLRSAAAAGVTAVIIPKDKSVGINATVRKTSSGAADRLPVIAVVNLARSLRELQKQDVWIYGLAGEVETSLYALDLRGNVALVLGGEADGLRRLTREHCDVLARIPMPGEVESLNVSVAAGVTL
type: DOMAIN
name: SpoU_MeTrfase
description: tRNA/rRNA methyltransferase, SpoU type
Protein sequence:
MTKNKPSTAEKTRLICQNKKAYHDYDILEKFEAGIVLLGTEVKSLREGRANLKDSYARVRKGEVFLQGLHISPYTHASYNNHEPERVRKLLLHAHEIKRLTGKTQERGLALIPLKLYFSKGKVKVELALAQGKKLYDKRESIKRKEENRELDRLRKRRRQE

Annotated regions:
phrase: AGIVLLGTEVKS
type: CONSERVED_SITE
name: SsrA-bd_prot_CS
description: SsrA-binding protein, conserved site
Protein sequence:
MSGQKPIYRRILLKLSGEALLGKEAYGIDSSVLDQIAEEVTAVHQMGVQVAIVIGGGNIFRGVSGASRGMDRSTADYMGMLATVMNALALQQALEKHGTSTRVQSAIDMKEVAEPYIRRRALRHMEKGRIVIFAAGTGLPFFTTDTTAALRAIEMGAEVLMKATKVDGIYASDPKKNPSALRYDRISFSEVLQKDLKVMDATAISLAKDQNMRIVVFNLRKKGNIKKIVLGKCIGTVVEGCDHAQ

Annotated regions:
phrase: RILLKLSGEALLGKEAYGIDSSVLDQIAEEVTAVHQMGVQVAIVIGGGNIFRGVSGASRGMDRSTADYMGMLATVMNALALQQALEKHGTSTRVQSAIDMKEVAEPYIRRRALRHMEKGRIVIFAAGTGLPFFTTDTTAALRAIEMGAEVLMKATKVDGIYASDPKKNPSALRYDRISFSEVLQKDLKVMDATAISLAKDQNMRIVVF
type: DOMAIN
name: Asp/Glu/Uridylate_kinase
description: Aspartate/glutamate/uridylate kinase
Protein sequence:
MKFTIQKDRLVESVQDVLKAVSSRTTIPILTGIKIVASDDGVSFTGSDSDISIESFIPKEEGDKEIVTIEQPGSIVLQARFFSEIVKKLPMATVEIEVQNQYLTIIRSGKAEFNLNGLDADEYPHLPQIEEHHAIQIPTDLLKNLIRQTVFAVSTSETRPILTGVNWKVEQSELLCTATDSHRLALRKAKLDIPEDRSYNVVIPGKSLTELSKILDDNQELVDIVITETQVLFKAKNVLFFSRLLDGNYPDTTSLIPQDSKTEIIVNTKEFLQAIDRASLLAREGRNNVVKLSAKPAESIEISSNSPEIGKVVEAIVADQIEGEELNISFSPKYMLDALKVLEGAEIRVSFTGAMRPFLIRTPNDETIVQLILPVRTY

Annotated regions:
phrase: MKFTIQKDRLVESVQDVLKAVSSRTTIPILTGIKIVASDDGVSFTGSDSDISIESFIPKEEGDKEIVTIEQPGSIVLQARFFSEIVKKLPMATVEIEVQNQYLTIIRSGKAEFNLNGLDADEYPHL
type: DOMAIN
name: DNA_polIII_beta_N
description: DNA polymerase III, beta sliding clamp, N-terminal

phrase: SLIPQDSKTEIIVNTKEFLQAIDRASLLAREGRNNVVKLSAKPAESIEISSNSPEIGKVVEAIVADQIEGEELNISFSPKYMLDALKVLEGAEIRVSFTGAMRPFLIRTPNDETIVQLILPV
type: DOMAIN
name: DNA_polIII_beta_C
description: DNA polymerase III, beta sliding clamp, C-terminal

phrase: QIPTDLLKNLIRQTVFAVSTSETRPILTGVNWKVEQSELLCTATDSHRLALRKAKLDIPEDRSYNVVIPGKSLTELSKILDDNQELVDIVITETQVLFKAKNVLFFSRLLDGNYP
type: DOMAIN
name: DNA_polIII_beta_cen
description: DNA polymerase III, beta sliding clamp, central
Protein sequence:
MLGKALAIFVFLMLNVLVAILLERKILGWMQLRPGPNRVGPWGVLQSLADGIKLALKETITPGGVDKFVYFAAPVISTIPAFTAFAFIPFGPVVSVFGHRTPLQLTDLPVAVLFILGLSAIGVYGIVLGGWASGSTYPLLGGVRSTAQVISYEVAMGLSFAAVFLYAGSMSTSQIVAAQDRVWFVFLLLPSFVIYLISMVGETNRAPFDLPEAEGELVAGFHTEYSSLKFAMFMLAEYVNMMTVSSLATALFFGGWHAPWPLNMWAGANTGWWPVLWFTAKMWTFLFIYFWLRASLPRLRYDQFMGLGWKLLIPASLVWVLIAAVIRTLQNQGYAHWTPILVISSIVFAAALVLSLRKPFTTPHIRALRRQLRRKAKQLPTAPDSTPVFPTPPLPAKALAAASKEKARG

Annotated regions:
phrase: PFDLPEAEGELVA
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_su1_CS
description: NADH:ubiquinone oxidoreductase, subunit 1, conserved site

phrase: GVLQSLADGIKLALK
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_su1_CS
description: NADH:ubiquinone oxidoreductase, subunit 1, conserved site
Protein sequence:
MADLHQKQIIDKLQHIIFKDGTFLNKVISDIIIKGNNIGFSIDISGKNKLEAEELKAKAIDKLNEISEINKITIVFTESKPMEKKAQKPKHFVENVKKIILVASGKGGVGKSTISALIAQQLSLENYRVGIVDADIYGPSIPHIFGINEVPKTKDGRIIPITVKSIQVISIGFFVKDHSAIIWRGPMASKTIYQLLSVTKWDNLDYLIIDMPPGTGDIHLSMLENYHLDGVIIVTTPQKISEIDVIRSIDLYQKLNLPILGIIENMSYMFESNSGGHLSQKYNIPLIAQIPIMPQIADACDKSLPLTDLLTLPLKEYL

Annotated regions:
phrase: WDNLDYLIIDMPPGTG
type: CONSERVED_SITE
name: Mrp-like_CS
description: Iron-sulfur cluster carrier protein-like, conserved site
Protein sequence:
MIRIAIDCMGGDFGLPVTIPAAIEFARQFPDTRLLLVGLPDAIEAALAERRDAPRDRLDIVPATEVVSMDDPVEVALRRKKDSSMRLAAQAVKDGRADACISAGNTGAWMAISRYVLKTLDGIDRPAIATSIPNQTGRATTVLDLGANVDCSAEHLLQFAIMGAALSQAVDHRDRPTVGLLNIGEEIIKGNEVVKEAAELLRASPLNFYGNVEGNDIFKGTVDVVVCDGFVGNVVLKSVEGLAKMLSSVIREEFKRNFITLLAGAFAKPVLNRLRNRVDNRRYNGAALLGLRGVVIKSHGSADAYAFGFALQRAREAVASKLLERTAQTVAQITKRVQSGEAVAPGAAGDTA

Annotated regions:
Protein sequence:
MPKSTVRPGAEIVGESAALKEVLEIAQIVARSNSPVLLRGESGTGKEFFAKLIHDSSSRHEKPFVKLNCAALSAGVLESELFGHEKGAFTGATSQKEGRFELAHGGTLLLDEIGEISAEFQAKLLRVLQEGELERVGGTRTLKVNVRLVCATNKDLETAVAAGEFRADLYYRINVVPITLPPLRQRDGDIPRLAQKFLQRFNRENGRSLSFAPATLDILSKCEFPGNIRELQNCTQRTATLARSDVIVPQDLACEQGRCYSPILKKAVAEQVGKGAIHGLARGETESMGQPCDVGVFAAETVMGQSGLIGRERLEQAMATAGWVQAKAARLLGRTPRQVGYSLRRHGIERKVF

Annotated regions:
phrase: ERLEQAMATAGWVQAKA
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: ARLLGRTPRQVGYSLRRHGI
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: GRFELAHGGTLLLDE
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_2
description: Sigma-54 interaction domain, ATP-binding site 2

phrase: FPGNIRELQ
type: CONSERVED_SITE
name: Sigma_54_int_dom_CS
description: Sigma-54 interaction domain, conserved site

phrase: VLLRGESGTGKEF
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_1
description: Sigma-54 interaction domain, ATP-binding site 1

phrase: IVGESAALKEVLEIAQIVARSNSPVLLRGESGTGKEFFAKLIHDSSSRHEKPFVKLNCAALSAGVLESELFGHEKGAFTGATSQKEGRFELAHGGTLLLDEIGEISAEFQAKLLRVLQEGELERVGGTRTLKVNVRLVCATNKDLETAVAAGEFRADLYYRINVVPITLPPLRQRDGDIPRLAQKFLQRFNRENGRSLSFAPATLDILSKCEFPGNIRELQNCTQRTA
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: IVGESAALKEVLEIAQIVARSNSPVLLRGESGTGKEFFAKLIHDSSSRHEKPFVKLNCAALSAGVLESELFGHEKGAFTGATSQKEGRFELAHGGTLLLDEIGEISAEFQAKLLRVLQEGELERVGGTRTLKVNVRLVCATNKDLETAVAAGEFRADLYYRINVVP
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: RERLEQAMATAGWVQAKAARLLGRTPRQVGYSLR
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: SNSPVLLRGESGTGKEFFAKLIHDSSSRHEKPFVKLNCAALSAGVLESELFGHEKGAFTGATSQKEGRFELAHGGTLLLDEIGEISAEFQAKLLRVLQEGELERVGGTRTLKVNVRLVCATNKDLETAVAAGEFRADLYYRIN
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain
Protein sequence:
MQQGDQTVLSLRPGGGRGNRLFGSSSSSSSLSFGSLSSSDLPLLRPHGGAPASSFPFKGGDSRFDGRERVKYTREQLLELKETTQLSDEILRVQRETAAELFGEEGTWARGESVVSNLVPVQSASRFSEPDSRDWRSRSTQPPPSGEERSWDNLREAKDSRYVEASQYNRQDQPNSQFSRANISSNQGGGPAPVLVKAEVPWSARRGNLSENDRVLKTVKGILNKLTPEKYDLLKGQLIESGITSADILKGVITLIFDKAVLEPTFCPMYAKLCSDINDQLPTFPPAEPGDKEITFKRVLLNICQEAFEGASQLREELRQMSAPDQEAERNDKEKLLKLKTLGNIRLIGELLKQKMVPEKIVHHIVQELLGADEKVCPAEENVEAICHFFKTIGKQLDGNVKSKRINDVYFKRLQALSKNPQLELRLRFMVQNIIDMRSNGWVPRREEMKARTITEIHTEAEKNLGLRPGATANMRRGMVSSGGPVSPGPVYPGGRPGAGGLMPGMPGTRRMPGMPGVDNDNWEVPRTRSMSRRDGPGPLHSPAVSKSASMNTRLLPQGSSGIMSGKTSALLQGSGSVSRPVTVSAERPAQSVAPLTVPVPVEKPQPSGPKLSEEVLQRKTKSLLEEYFNVRLLGEALQCVEELGLPSYHPEFVKEAISLSLEKSPPVVEPIATLLEYLLSKKVVAPKDLETGFLLYGAMLDDIGIDLPKAPNNFGEIVGKLILAGGVDFKLVREIIGKMEDDRFQKMVVDAAVRIVESSEQGKSLLA

Annotated regions:
phrase: LKTVKGILNKLTPEKYDLLKGQLIESGITSADILKGVITLIFDKAVLEPTFCPMYAKLCSDINDQLPTFPPAEPGDKEITFKRVLLNICQEAFEGASQLREELRQMSAPDQEAERNDKEKLLKLKTLGNIRLIGELLKQKMVPEKIVHHIVQELLGADEKVCPAEENVEAICHFFKTIGKQLDGNVKSKRINDVYFKRLQALSKNPQLELRLRFMVQNIIDMRS
type: DOMAIN
name: MIF4G-like_typ-3
description: MIF4G-like, type 3

phrase: LKTVKGILNKLTPEKYDLLKGQLIESGITSADILKGVITLIFDKAVLEPTFCPMYAKLCSDINDQLPTFPPAEPGDKEITFKRVLLNICQEAFEGASQLREELRQMSAPDQEAERNDKEKLLKLKTLGNIRLIGELLKQKMVPEKIVHHIVQELLGADEKVCPAEENVEAICHFFKTIGKQLDGNVKSKRINDVYFKRLQALSKNPQLELRLRFMVQNIIDMRSN
type: DOMAIN
name: MIF4G-like_typ-3
description: MIF4G-like, type 3

phrase: VLQRKTKSLLEEYFNVRLLGEALQCVEELGLPSYHPEFVKEAISLSLEKSPPVVEPIATLLEYLLSKKVVAPKDLETGFLLYGAMLDDIGIDLPKAPNNFGEIVGKLILAGGVDFKLVREII
type: DOMAIN
name: Initiation_fac_eIF4g_MI
description: Initiation factor eIF-4 gamma, MA3

phrase: LQRKTKSLLEEYFNVRLLGEALQCVEELGLPSYHPEFVKEAISLSLEKSPPVVEPIATLLEYLLSKKVVAPKDLETGFLLYGAMLDDIGIDLPKAPNNFGEIVGKLILAGGV
type: DOMAIN
name: Initiation_fac_eIF4g_MI
description: Initiation factor eIF-4 gamma, MA3

phrase: LQRKTKSLLEEYFNVRLLGEALQCVEELGLPSYHPEFVKEAISLSLEKSPPVVEPIATLLEYLLSKKVVAPKDLETGFLLYGAMLDDIGIDLPKAPNNFGEIVGKLILAGG
type: DOMAIN
name: Initiation_fac_eIF4g_MI
description: Initiation factor eIF-4 gamma, MA3
Protein sequence:
MAAIGVHLGCTCACVAVFKDGRADVVANDAGDRVTPAVVGFLEKEVIVGLAAKQSRVRNATNTIVKVKQILGRSYGDPIAQKHITESKCTVVEKGGKPKYEIDTGETQKLVSSEDVAKLIFSKMKETAQSALGSDVNDVVITVPFDFGESQKKALGEAASAAGFNILRMIHEPSAALLAYGIGQESPTGKSNVLVYKLGGTSLSVTMIEVNSGIYRVLATSTYDGIGGVCFTEALAQHLASEFQRTYKQDIRGNARAMMKLMNSADVAKHALSTLGSSNCFVDSLYDGIDFDCSVSRARFELICSSLFNQCIDPIKKLLEQVGFKATDVNQVVLCGGSARIPKLQQLIKDLFPEVEMLSSIPPDEVIPVGAAIQAGILLGKENTDLDTITIECSASDMLVKEIDESGNKFTVLLPSGTPLPARRQHVLQAPGNISSVCLELYESDGKSSVSEECKFAQVVLKDLQKKTSGVRDILTVLTMKRDGSLHITCTDKDSGKSEMITIEDTS

Annotated regions:
phrase: AAIGVHLGCTCACVAVFKDGRADVVANDAGDRVTPAVVGFLEKEVIVGLAAKQSRVRNATNTIVKVKQILGRSYGDPIAQKHITESKCTVVEKGGKPKYEIDTGETQKLVSSEDVAKLIFSKMKETAQSALGSDVNDVVITVPFDFGESQKKALGEAASAAGFNILRMIHEPSAALLAYGIGQESPTGKSNVLVYKLGGTSLSVTMIEVNSGIYRVLATSTYDGIGGVCFTEALAQHLASEFQRTYKQDIRGNARAMMKLMNSADVAKHALSTLGSSNCFVDSLYDGIDFDCSVSRARFELICSSLFNQCIDPIKKLLEQVGFKATDVNQVVLCGGSARIPKLQQLIKDLFPEVEMLSSIPPDEVIPVGAAIQAGI
type: DOMAIN
name: HSPA14_NBD
description: Heat shock 70kDa protein 14, nucleotide-binding domain
Protein sequence:
MTEKANGVKSSPANNHNHHAPPAIKASGKDDHRASSRPQSAAADDTSSELQQLAEMDAPQQRRGGFRRIARLVGVLREWAYRNFREEEPRPDSFLERFRGPELHTVTTQQGDGKGDKDGEGKGTKKKFELFVLDPAGDWYYRWLFLIALPVLYNWCLLVARACFSDLQKGYYIVWLVLDYVSDVVYIADLFIRLRTGFLEQGLLVKDTKKLRDNYIHTMQFKLDVASIIPTDLIYFAVGIHNPEVRFNRLLHFARMFEFFDRTETRTSYPNIFRISNLILYILIIIHWNACIYYAISKSIGFGVDTWVYPNITDPEYGYLSREYIYCLYWSTLTLTTIGETPPPVKDEEYLFVIFDFLIGVLIFATIVGNVGSMISNMNATRAEFQAKIDAVKHYMQFRKVSKEMEAKVIRWFDYLWTNKKSVDEREVLKNLPAKLRAEIAINVHLSTLKKVRIFQDCEAGLLVELVLKLRPQVFSPGDYICRKGDIGKEMYIIKEGKLAVVADDGVTQYALLSAGSCFGEISILNIKGSKMGNRRTANIRSLGYSDLFCLSKDDLMEAVTEYPDAKRVLEERGREILMKEGLLDENEVAASMEVDVQEKLEQLETNMDTLYTRFARLLAEYTGAQQKLKQRITVLETKMKQNNEDDSLSDGMNSPEPPAEKP

Annotated regions:
phrase: IFQDCEAGLLVELVLKLRPQVFSPGDYICRKGDIGKEMYIIKEGKLAVVADDGVTQYALLSAGSCFGEISILNIKGSKMGNRRTANIRSLGYSDLFCLSKDDLMEAVTEYPDAKRV
type: DOMAIN
name: cNMP-bd_dom
description: Cyclic nucleotide-binding domain

phrase: QVFSPGDYICRKGDIGKEMYIIKEGKLAVVADDGVTQYALLSAGSCFGEISILNIKGSKMGNRRTANIRSLGYSDLFCLSKDDLMEAV
type: DOMAIN
name: cNMP-bd_dom
description: Cyclic nucleotide-binding domain

phrase: IFQDCEAGLLVELVLKLRPQVFSPGDYICRKGDIGKEMYIIKEGKLAVVADDGVTQYALLSAGSCFGEISILNIKGSKMGNRRTANIRSLGYSDLFCLSKDDLMEAVTEYPDAK
type: DOMAIN
name: cNMP-bd_dom
description: Cyclic nucleotide-binding domain

phrase: LEERGREILMKEGLLDENEVAASMEVDVQEKLEQLETNMDTLYTRFARLLAEYTGAQQKLKQRITVLE
type: DOMAIN
name: CLZ_dom
description: Cyclic nucleotide-gated channel, C-terminal leucine zipper domain

phrase: ICRKGDIGKEMYIIKE
type: CONSERVED_SITE
name: cNMP-bd_CS
description: Cyclic nucleotide-binding, conserved site

phrase: YRWLFLIALPVLYNWCLLVARACFSDLQKGYYIVWLVLDYVSDVVYIADLFIRLRTGFLEQGLLVKDTKKLRDNYIHTMQFKLDVASIIPTDLIYFAVGIHNPEVRFNRLLHFARMFEFFDRTETRTSYPNIFRISNLILYILIIIHWNACIYYAISKSIGFGVDTWVYPNITDPEYGYLSREYIYCLYWSTLTLTTIGETPPPVKDEEYLFVIFDFLIGVLIFATIVGNVGSMISNMNA
type: DOMAIN
name: Ion_trans_dom
description: Ion transport domain

phrase: FGEISILNIKGSKMGNRRTANIR
type: CONSERVED_SITE
name: cNMP-bd_CS
description: Cyclic nucleotide-binding, conserved site

phrase: IFQDCEAGLLVELVLKLRPQVFSPGDYICRKGDIGKEMYIIKEGKLAVVADDGVTQYALLSAGSCFGEISILNIKGSKMGNRRTANIRSLGYSDLFCLSKDDLMEAVTEYPDAKRVLEERGREI
type: DOMAIN
name: cNMP-bd_dom
description: Cyclic nucleotide-binding domain