nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MGRTRKGRAISGWLVVDKPAGMTSTAVVNKVRWALGAQKAGHAGTLDPDATGVLAVALGEATKTVPYITDALKCYRFMVRLGVGTRTDDASGEVIATSEARPEDPEIEAALAAFRGEIMQVPPQFSAVKVEGERAYDLAREGERLDLAARPLWVESLELISRPDADHVELEMVCGKGGYVRSIARDLGQALGCHGHVEWLRRTWSGPFEAEDGISVATIDELAKSEELLAHVMPLACGLADLPELPATAEGAARLKCGNPGMVIASDVEFGEEAWASFQGQPVAVGIYKAGELHPTRVFNL

Annotated regions:
phrase: RSIARDLGQALGCHGHVEWLRRTWSGPFEAEDGISVATIDELAKSEELLAHVMP
type: DOMAIN
name: TruB_C
description: tRNA pseudouridylate synthase B, C-terminal

phrase: RWALGAQKAGHAGTLDPDATGVLAVALGEATKTVPYITDALKCYRFMVRLGVGTRTDDASGEVIATSEARPEDPEIEAALAAFRGEIMQVPPQFSAVKVEGERAYDLAREGERLDLAARPLWVESLELISRPDADHVELEMVCGKGGY
type: DOMAIN
name: PsdUridine_synth_N
description: Pseudouridine synthase II, N-terminal
Protein sequence:
MLTVPGLCWLCRMPLALSHWGICSVCARAVRQRVSLCPQCGLPAGHPSLPCGRCLQKPPPWQRLVSVSDYTPPLSLLVHQLKFTRRSEIAAALARLLLQEVLMARRSTGLPLPDRIVSVPLWSRRHWRRGFNQSDLLCQPLAHWLGCAWDSQTITRVRATATQHHLSARLRKRNLKNAFRLELPVQGLHMVIVDDVVTTGSTVAEIAQLLLRNGAATVQVWCLCRTL

Annotated regions:
phrase: LMARRSTGLPLPDRIVSVPLWSRRHWRRGFNQSDLLCQPLAHWLGCAWDSQTITRVRATATQHHLSARLRKRNLKNAFRLELPVQGLHMVIVDDVVTTGSTVAEIAQLLLRNGAATVQVWC
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: RNLKNAFRLELPVQGLHMVIVDDVVTTGSTVAEIAQLLLRNGAATVQVWCLC
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain
Protein sequence:
MGCHNSKVCGQVSKKKKKNKAQEGEKRTKDIKLQDGRGTHSSEEERCCLENQLENYEWQLKILHAVLTASGDQEREQLLKDHPGDICTLVHSITEKVKTEISADLNDLHEQQMRSVSEQHQSETEELQRLHSEEKNVLNESHAAAEEALKDQIEDLTSELKLFNELKRRAEASTLKRDLQRNIETHGSPGEFWEQEQESLLFVIEMKRQNLQDQGNKLLQMEAQVEKNLSLEDQLLQALQQNEDFRVRIENYQSLIQQLSKEQNDMQEVLEKQSLQNQKLIQEKEELLFKLLHRRDSCSTFHLPSVIPTQVSPS

Annotated regions:
Protein sequence:
MATVEELQTRVKQLEEELERERTRNRGGTDGGGGRKKIDQMSSEVVDSNPYSRLMALKRMGIVDNYERIRDFTVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEITLRDINPDVEFETHNYNITTVDNFQHFMDRISHGHLKGDRPVDLVLSCVDNFEARMAINTACNEQGQVWIESGVSENAVSGHIQVIKPGETACFACAPPLVVASGIDEKTLKREGVCAASLPTTMGIVAGFLVQNTLKYLLEFGSVTYYLGYNAMQDFFPSMAMKPNPNCDDSFCTKLQTEYQEKLLAQPKEEAKEETVEEVVHDANDWGIELVAETTEEELKAASHGHVPELVEGVHVAYVRPMTQEDEEGAAGLTVDDQESLEDLMAKMKSI

Annotated regions:
phrase: YSRLMALKRMGIVDNYERIRDFTVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEITLRDINPDVEFETHNYNITTVDNFQHFMDRISHGHLKGDRPVDLVLSCVDNFEARMAINTACNEQGQVWIESGVSENAVSGHIQVIKPGETACFACAPPLVVASGIDEKTLKREGVCAASLPTTMGIVAGFLVQNTLKYLLEFGSVTYYLGYNAMQDFFPSMAMKPNPNC
type: DOMAIN
name: ThiF_NAD_FAD-bd
description: THIF-type NAD/FAD binding fold

phrase: VAIVGVGGVGSVTAEMLTRCGIGKLLLF
type: CONSERVED_SITE
name: D-isomer_DH_CS1
description: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1
Protein sequence:
MSDEDHDFAHQGGGDNASKTYPMAAGALKKGGYVCINGRPCKVIDLSVSKTGKHGHAKVSIVATDIFTGNRLEDQAPSTHNVEVPFVKTFTYSVLDIQPNEDPSLPSHLSLMDDEGESREDLDMPPDAALATQIKEQFDSGKEVLVVVVSAMGTEQVLQTKNAAEK

Annotated regions:
phrase: FVKTFTYSVLDIQPNEDPSLPSHLSLMDDEGESREDLDMPPDAALATQIKEQFDSGKEVLVVVVSAMGTEQVLQT
type: DOMAIN
name: Transl_elong_IF5A_C
description: Translation elongation factor, IF5A C-terminal

phrase: SKTYPMAAGALKKGGYVCINGRPCKVIDLSVSKTGKHGHAKVSIVATDIFTGNRLEDQAPST
type: DOMAIN
name: IF5A-like_N
description: Translation initiation factor 5A-like, N-terminal

phrase: FVKTFTYSVLDIQPNEDPSLPSHLSLMDDEGESREDLDMPPDAALATQIKEQFDSGKEVLVVVVSAMGTEQVLQT
type: DOMAIN
name: Transl_elong_IF5A_C
description: Translation elongation factor, IF5A C-terminal

phrase: TGKHGHA
type: PTM
name: Trans_elong_IF5A_hypusine_site
description: Translation elongation factor, IF5A, hypusine site
Protein sequence:
FIVLVICLSCLISFFLWNQNRAKGKLPPGPTPLPIIGNILQINTKNVSKSLSKLAENYGPVFTVYFGMKPTVVLYGYEAVKEALIDRSEEFSGRGHFPLLDWTIQGLGIVFSNGEKWKQTRRFSLTVLRNMGMGKKTVEDRIQEEALYLVEALKKTNASPCDPTFLLGCAPCNVICSIIFQNRFEYDDKDFLTLLEYFHENLLISSTSWIQLYNAFPLLIHYLPGSHHVLFKNIANQFKFISEKIKEHEESLNFSNPRDFIDYFLIKIEKEKHNKQSEFTMDNLIITIWDVFSAGTETTSTTLRYGLLVLLKHPDVTAKVQEEIHRVVGRHRSPCMQDRSCMPYTDAVVHEIQRYIDLVPNNLPHSVTQDIKFREYLIPKGTTILTSLTSVLHDEKGFPNPDQFDPGHFLDENGSFKKSDYFMAFSAGKRVCVGEGLARMELFLLLTNILQHFTLKPLVDPKDIDTTPIANGLGATPPSYKLCFVPV

Annotated regions:
phrase: FSAGKRVCV
type: CONSERVED_SITE
name: Cyt_P450_CS
description: Cytochrome P450, conserved site
Protein sequence:
MSSQQQKQPCTVPPQLHQHEVKQPCQPPPQEPCAPKTKEPCHPIPEPCNPKVPEPCQPKVPEPCQPKVPEPCQPKVPEPCQPKVPEPCQPKVPEPCQPKVPEPCHPKAPEPCHPVVPEPCQPVAPEPCQPVVPEPCPPTVTPSPYQQKTKQK

Annotated regions:
Protein sequence:
MRRQPPRPRNSPPQSHSSPSSSSSEFEFNISISPRKASSSLCPADELFYKGQLLPLQLSPRLSLVRTLGSSTSSSDYTSSSSSSVATSAARDSTESNSSTDSTASFPLLHPPPLDCCDSSRPSSVTDDEDFFFKPPKNKSSSGGFSLSRFSSVFKKDPKTNLHHHSSSSSTATTAAAPSSVKRMSSTAKEVIRKYMKKVKPLYEKLSPKQSSNIKTESSSSLKDSGNNIRGTTTVTTVTAAPTVVSSGGGLSISFSGNLMKYTKRGRCAASCPSSMRSSPNHSGVLTRGGFPVHQGSCSSSSSNNNSVSSSMEELQSAIQGAIAHCKNSMLQKNLVSSLEI

Annotated regions:
Protein sequence:
MSDKASTPKKSATKDATKPKKVGDEEAKKREVKKNFDSYALYISRVLKSVFPDIGITLPSISVMDSFVRDIFERIAMDASSLTRNYQKSTLTTKEIETATKLILKGDLNKHAVSEGQSAVKRAQGQPTSGSKSR

Annotated regions:
phrase: PKKSATKDATKPKKVGDEEAKKREVKKNFDSYALYISRVLKSVFPDIGITLPSISVMDSFVRDIFERIAMDASSLTRNYQKSTLTTKEIETATK
type: DOMAIN
name: Histone_H2A/H2B/H3
description: Histone H2A/H2B/H3

phrase: KEIETATKLILKGDLNKHAVSE
type: CONSERVED_SITE
name: HISTONE_H2B_site
description: Histone H2B, conserved site
Protein sequence:
MFNWVKTAMLMAAITALFIVIGGMIGGSRGMTIALLIALGMNFFSYWFSDKMVLRMYNAQEVDEATAPQFYRMVRELATRANLPMPRVYLIDENQPNAFATGRNPEHAAVAATTGILRVLSEREMRGVMAHELAHVKHRDILISTISATMAGAISALANFAMFFGGRDENGRPANPIAGIAVALLAPIAGALIQMAISRAREFEADRGGAQISGDPQALASALDKIHRYASGIPFQTAEEHPATAQMMIMNPLSGGGLQNLFSTHPATEERIARLMDMARTGRFD

Annotated regions:
phrase: TAPQFYRMVRELATRANLPMPRVYLIDENQPNAFATGRNPEHAAVAATTGILRVLSEREMRGVMAHELAHVKHRDILISTISATMAGAISALANFAMFFGGRDENGRPANPIAGIAVALLAPIAGALIQMAISRAREFEADRGGAQISGDPQALASALDKIHRYASGIPFQTAEEHPATAQMMIMNPLSGGGLQNLFSTHPATEERIARLM
type: DOMAIN
name: Peptidase_M48
description: Peptidase M48
Protein sequence:
MGNIKSFALYISILLLIVVVAGCGKSDKTKEDSKEEQIKKSFAKTLDMYPIKNLEDLYDKEGYRDGEFKKGDKGTWTLLTSFSKSNKPDEIDDEGMVLYLNRNTKKATGYYFVNKIYDDISKNQNEKKYRVELKNNKIVLLDNVEDEKLKQKIENFKFFSQYADFKDLKNYQDGSITTNENIPSYEAEYKLNNSDENVKKLRDIYPITTKKAPILKLHIDGDIKGSSVGYKKIEYKFSKVKDQETTLRDYLNFGPSDEDS

Annotated regions:
Protein sequence:
MTKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAIAQNGFFLDTESSKKILALEDEQPIVDAFMKTVDASDPLARIHALKSAGDFDIFFPVVHGNLGEDGTLQGLFKLLDKPYVGAPLRGHAVSFDKALTKELLTVNGIRNTKYIVVDPESANNWSWDKIVAELGNIVFVKAANQGSSVGISRVTNAEEYTEALSDSFQYDYKVLIEEAVNGARELEVGVIGNDQPLVSEIGAHTVPNQGSGDGWYDYNNKFVDNSAVHFEIPAQLSPEVTKEVKQMALDAYKVLNLRGEARMDFLLDENNVPYLGEPNTLPGFTNMSLFKRLWDYSDINNAKLVDMLIDYGFEDFAQNKKLSYSFVSLGEEKIGKFN

Annotated regions:
phrase: HGNLGEDGTLQ
type: CONSERVED_SITE
name: D-Ala_lig_Van_CS
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site

phrase: KELLTVNGIRNTKYIVVDPESANNWSWDKIVAELGNIVFVKAANQGSSVGISRVTNAEEYTEALSDSFQYDYKVLIEEAVNGARELEVGVIGNDQPLVSEIGAHTVPNQGSGDGWYDYNNKFVDNSAVHFEIPAQLSPEVTKEVKQMALDAYKVLNLRGEARMDFLLDENNVPYLGEPNTLPGFTNMSLFKRLWDYSDINNAKLVDMLI
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold

phrase: LNLRGEARMDFLLDENNVPYLGEPNTLP
type: CONSERVED_SITE
name: D-Ala_lig_Van_CS
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site

phrase: RVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAIAQNGFFLDTESSKKILALEDEQPIVDAFMKTVDASDPLARIHALKSAGDFDIFFPVVHGNLGEDGTLQGLFKLLDKPYVG
type: DOMAIN
name: Dala_Dala_lig_N
description: D-alanine--D-alanine ligase, N-terminal domain

phrase: TVNGIRNTKYIVVDPESANNWSWDKIVAELGNIVFVKAANQGSSVGISRVTNAEEYTEALSDSFQYDYKVLIEEAVNGARELEVGVIGNDQPLVSEIGAHTVPNQGSGDGWYDYNNKFVDNSAVHFEIPAQLSPEVTKEVKQMALDAYKVLNLRGEARMDFLLDENNVPYLGEPNTLPGFTNMSLFKRLWDYSDINNAKLVDML
type: DOMAIN
name: Dala_Dala_lig_C
description: D-alanine--D-alanine ligase, C-terminal
Protein sequence:
MVEYAHSKPVDPEEWTVIDAENAVLGRLASVVAKRILKGERIAVINTEKAIITGKKNTIKEEWLQKIQRGDPKKGPFYPRRPDLIFRRVVRGMLPWKTKRGREAFKRLRAYIGTPRWVEEANIEPERVAEADMSRLGHLWYVTLGELSEELGYQMPGGQ

Annotated regions:
phrase: VRGMLPWKTKRGREAFKRLRAYI
type: CONSERVED_SITE
name: Ribosomal_uL13_CS
description: Large ribosomal subunit protein uL13, conserved site
Protein sequence:
MPVYVDREAPKLWRRIYSEATLEASLLAEKWKLVLAGLVFQYIHGLAAHGVHYLHRPGPTLQDAGFFILPALGQDKAFFSETVFVTIFGSFILWTFHPFVSHSKKICTVLIWCRVFVYLAASQSLRIITFFATQLPGPNYHCREGSKLAKIPPPKNVLEVLLINFPDGVIYGCGDLIFSSHTIFTLVFVRTYQRYGTRRWIKHLAWLMAVIQSILIIASRKHYTVDIVVAWYTVNLVMFYVDSKLPEMAERSSGPSPTPLLPLSTKDSKNKSKEDHQRLLNENNVADDH

Annotated regions:
phrase: GCGDLIFSSHTIFTLVFVRTYQRYGTRRWIKHLAWLMAVIQSILIIASRKHYTVDIVVAWYTVNLVMF
type: DOMAIN
name: Sphingomyelin_synth-like_dom
description: Sphingomyelin synthase-like domain
Protein sequence:
MVVLQSYCEVNSPISITWVDEGISPCFYFTLVPTILLTIAIFLGTIHCVFYQKYGTTMEPKFIPRSRLYGFQLAVTVLLGLQSLGGTVYRAATAAELPGYAVLNGCFYVLAWGWAFALLRVERRRALLMDRTRGHSGALLAFWAVAFAAENLAFVSWYSPHWWWGLDTTEHQVQFALWLIRYSGAGLLFFIGLRAPGLPRRPYMLLINEDERDVEASAQSLLGRTEENLSTWQGFRKKVRLLVPYMWPRGNVFLQMLVLLCLGLLGVERAINVFVPIYYKNIVNALTDGSSWRSVATIVCIYVLLKLLQGGGAGSSGFVSNIRTFLWIRVQQFTNRVVEVQLFAHLHSLSLRWHLGRKTGDVLRSIDRGTSSINSLLSYIVFSIFPTIADIVISIIYFITYFNAWFGLIVFCCMALYLTLTIIITEWRTKYRREMNQMDNLTKTRAVDSLLNFETVKYYNAENYEVSRFEDAILKYQVSEWKTQASLAMLNQTQNVIIGSGLLAGSLLCAYFVTEGKFQVGDFVLFGTYIIQLYTPLNWFGTYYRMIQTSFIDMESMFKLFEEDQEVNDEVNAGNLLFKLGKVEFDGVYFSYTNGKEILRDVSFTVLPGQTVALVGPSGSGKSTIIRLVFRFYDVQGGCIRIDGQDIAKVKQTSLRAHVGVVPQDTVLFNDTIRENIRYGRISASDQEVEEAAMAADIHDKIMTFPDGYDTQVGERGLKLSGGEKQRVAIARTILKAPQIILLDEATSALDTQTERNIQASLTKVCAT

Annotated regions:
phrase: VEFDGVYFSYTNGKEILRDVSFTVLPGQTVALVGPSGSGKSTIIRLVFRFYDVQGGCIRIDGQDIAKVKQTSLRAHVGVVPQDTVLFNDTIRENIRYGRISASDQEVEEAAMAADIHDKIMTFPDGYDTQVGERGLKLSGGEKQRVAIARTILKAPQIILLDEATSALDTQTERNIQASLTKVCA
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: SYCEVNSPISITWVDEGISPCFYFTLVPTILLTIAIFLGTIHCVFYQKYGTTMEPKFIPRSRLYGFQLAVTVLLGLQSLGGTVYRAATAAELPGYAVLNGCFYVLAWGWAFALLRVERRRALLMDRTRGHSGALLAFWAVAFAAENLAFVSWYSPHWWWGLDTTEHQVQFALWLIRYSGAGLLFFIGLRAPGLPRRPYMLLINEDERDVEASAQSLLGRTEENLSTWQGFRKKVRLLVPYMW
type: DOMAIN
name: ABCB6_N
description: ATP-binding cassette sub-family B member 6, N-terminal five TM domain

phrase: LLCLGLLGVERAINVFVPIYYKNIVNALTDGSSWRSVATIVCIYVLLKLLQGGGAGSSGFVSNIRTFLWIRVQQFTNRVVEVQLFAHLHSLSLRWHLGRKTGDVLRSIDRGTSSINSLLSYIVFSIFPTIADIVISIIYFITYFNAWFGLIVFCCMALYLTLTIIITEWRTKYRREMNQMDNLTKTRAVDSLLNFETVKYYNAENYEVSRFEDAILKYQVSEWKTQASLAMLNQTQNVIIGSGLLAGSLLCAYFVTEGKFQVGDFVLFGTYIIQLYTPLNWFGTYYRMIQ
type: DOMAIN
name: ABC1_TM_dom
description: ABC transporter type 1, transmembrane domain

phrase: LRDVSFTVLPGQTVALVGPSGSGKSTIIRLVFRFYDVQGGCIRIDGQDIAKVKQTSLRAHVGVVPQDTVLFNDTIRENIRYGRISASDQEVEEAAMAADIHDKIMTFPDGYDTQVGERGLKLSGGEKQRVAIARTILKAPQIILLDEAT
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: LSGGEKQRVAIART
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: PGQTVALVGPSGSGKSTIIRLVFRFYDVQGGCIRIDGQDIAKVKQTSLRAHVGVVPQDTVLFNDTIRENIRYGRISASDQEVEEAAMAADIHDKIMTFPDGYDTQVGERGLKLSGGEKQRVAIARTILKAPQIILLDEATSALDTQTERNIQASLTKV
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LCLGLLGVERAINVFVPIYYKNIVNALTDGSSWRSVATIVCIYVLLKLLQGGGAGSSGFVSNIRTFLWIRVQQFTNRVVEVQLFAHLHSLSLRWHLGRKTGDVLRSIDRGTSSINSLLSYIVFSIFPTIADIVISIIYFITYFNAWFGLIVFCCMALYLTLTIIITEWRTKYRREMNQMDNLTKTRAVDSLLNFETVKYYNAENYEVSRFEDAILKYQVSEWKTQASLAMLNQTQNVIIGSGLLAGSLLCAYFVTEGKFQVGDFVLFGTYIIQLYTP
type: DOMAIN
name: ABC1_TM_dom
description: ABC transporter type 1, transmembrane domain
Protein sequence:
MFDKTQTIAAFDPEIWASIQNEGRRQEEHIELIASENYTSPLVMAAQGTKLTNKYAEGYPGKRYYGGCEYVDQSEALAIERAKQLFGADYANVQPHSGSQANTAVYAALCAPGDTVLGMSLAHGGHLTHGAKVNFSGKIYNAVQYGLNPETGLVDYDEVERLALEHKPKMIVAGFSAYSQVLDWQRFRDIADKVGAYLMVDMAHVAGLVAAGLYPNPVQIADVTTSTTHKTLRGPRGGIILAKANEEIEKKLNSAVFPGGQGGPLMHVIAAKAISFKEAMTPEYKDYQQQVVKNAKAMAATFIERGIKIVSGGTENHLMLVDLIGKPYSGKDADEALGKAHITVNKNAVPNDPRSPFVTSGIRVGTPAITTRGFKEAECIQLTNWICDIFAALEAGNADAVIEQVKTRVASLCKEFPVYAD

Annotated regions:
phrase: AAFDPEIWASIQNEGRRQEEHIELIASENYTSPLVMAAQGTKLTNKYAEGYPGKRYYGGCEYVDQSEALAIERAKQLFGADYANVQPHSGSQANTAVYAALCAPGDTVLGMSLAHGGHLTHGAKVNFSGKIYNAVQYGLNPETGLVDYDEVERLALEHKPKMIVAGFSAYSQVLDWQRFRDIADKVGAYLMVDMAHVAGLVAAGLYPNPVQIADVTTSTTHKTLRGPRGGIILAKANEEIEKKLNSAVFPGGQGGPLMHVIAAKAISFKEAMTPEYKDYQQQVVKNAKAMAATFIERGIKIVSGGTENHLMLVDLIGKPYSGKDADEALGKAHITVNKNAVPNDPRSPFVTSGIRVGTPAITTRGFKEAECIQLTNW
type: DOMAIN
name: SHMT-like_dom
description: Serine hydroxymethyltransferase-like domain

phrase: DVTTSTTHKTLRGPRG
type: BINDING_SITE
name: Ser_HO-MeTrfase_PLP_BS
description: Serine hydroxymethyltransferase, pyridoxal phosphate binding site
Protein sequence:
MRIALGIEYDGSGYFGWQRQAEVDSVQGQLERALSIVANEPIGLFCAGRTDAGVHATGQVVHFDTNAIRNEGAWTLGVNANLPDNIAVRWVKEVDDSFHARFSATARRYRYVIYNHSFRPGILRHGVSHYHGNIDADKMHQAAQVLLGEQDFTSFRAVQCQSKTPFRNVHSVNVTRQGMYVIVDIAANAFLHHMVRNIVGSLLEIGLGNQPLTWMGDLLALKDRNQAAATAKPHGLYLVDVTYPEQYQLPKLALGPLFMLD

Annotated regions:
phrase: AAQVLLGEQDFTSFRAVQCQSKTPFRNVHSVNVTRQGMYVIVDIAANAFLHHMVRNIVGSLLEIGLGNQPLTWMGDLLALKDRNQAAATAKPHGLYLVDVTY
type: DOMAIN
name: PsdUridine_synth_TruA_a/b_dom
description: Pseudouridine synthase I, TruA, alpha/beta domain

phrase: EYDGSGYFGWQRQAEVDSVQGQLERALSIVANEPIGLFCAGRTDAGVHATGQVVHFDTNAIRNEGAWTLGVNANLPDNIAVRWVKEVDDSFHAR
type: DOMAIN
name: PsdUridine_synth_TruA_a/b_dom
description: Pseudouridine synthase I, TruA, alpha/beta domain
Protein sequence:
MNKSRVVVGMSGGVDSSVAALLLKQQGYDVIGLFMKNWEDDDTDEYCSSRKDFLDAASVADILDIPLEAVNFSAEYRERVFSLFLAEYQAGRTPNPDVLCNSEIKFKAFLDHALALGADWIATGHYAQVHEINGQFQLLKGEDGNKDQSYFLYRLNQQQLSRTIFPIGHLYKREVRKIAHKHGLPNSTKKDSTGICFIGERPFREFLNRYLPVDPGEIHTLDGQIVGEHQGLMYYTIGQRQGLGIGGIREGSEQPWFVSGKDMQTNVLYVVQGHDHPALLRSSLTAADLSWISGAPPHQSWVYAAKIRYRQTDAPCAIIRLEHDSCQIGFAAPQWGVTPGQSVVIYESKVCLGGGIITDSV

Annotated regions:
phrase: SSLTAADLSWISGAPPHQSWVYAAKIRYRQTDAPCAIIRLEHDSCQIGFAAPQWGVTPGQSVVIYESKVCLGGGI
type: DOMAIN
name: MnmA-like_C
description: tRNA-specific 2-thiouridylase MnmA-like, C-terminal domain

phrase: EFLNRYLPVDPGEIHTLDGQIVGEHQGLMYYTIGQRQGLGIGGIREGSEQPWFVSGKDMQTNVLYVV
type: DOMAIN
name: MnmA-like_central
description: tRNA-specific 2-thiouridylase MnmA-like, central domain
Protein sequence:
MADQTHVLFVEDDDVIREATQLALERDGFAVTAMPDGLSGLESFRADRPDIALLDVMLPGLDGVSLCRRIRDESTVPVIMLSARADSIDVVLGLEAGADDYVTKPFDGAVLVARIRAVLRRFGHAGGGDRTEGAGAAETGGVLTFGDLEVDTDGMEVRRAGRPVGLTPTEMRLLLEFSSAPGTVLSRDKLLERVWDYGWGGDTRVVDVHVQRLRTKIGQDRIETVRGFGYKLKA

Annotated regions:
phrase: GGVLTFGDLEVDTDGMEVRRAGRPVGLTPTEMRLLLEFSSAPGTVLSRDKLLERVWDYGWGGDTRVVDVHVQRLRTKIGQDRIETVRGFGYKLK
type: DOMAIN
name: OmpR/PhoB-type_DNA-bd
description: OmpR/PhoB-type DNA-binding domain

phrase: VLFVEDDDVIREATQLALERDGFAVTAMPDGLSGLESFRADRPDIALLDVMLPGLDGVSLCRRIRDESTVPVIMLSARADSIDVVLGLEAGADDYVTKPFDGAVLVARI
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: HVLFVEDDDVIREATQLALERDGFAVTAMPDGLSGLESFRADRPDIALLDVMLPGLDGVSLCRRIRDESTVPVIMLSARADSIDVVLGLEAGADDYVTKPFDGAVLVARIRAV
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: LEVDTDGMEVRRAGRPVGLTPTEMRLLLEFSSAPGTVLSRDKLLERVWDYGWGGDTRVVDVHVQRLRTKIGQDRIETVRGFGYK
type: DOMAIN
name: OmpR/PhoB-type_DNA-bd
description: OmpR/PhoB-type DNA-binding domain

phrase: GRPVGLTPTEMRLLLEFSSAPGTVLSRDKLLERVWDYGWGGDTRVVDVHVQRLRTKIGQDRIETVRGFGYK
type: DOMAIN
name: OmpR/PhoB-type_DNA-bd
description: OmpR/PhoB-type DNA-binding domain

phrase: GRPVGLTPTEMRLLLEFSSAPGTVLSRDKLLERVWDYGWGGDTRVVDVHVQRLRTKIGQDRIETVRGFGYK
type: DOMAIN
name: OmpR/PhoB-type_DNA-bd
description: OmpR/PhoB-type DNA-binding domain

phrase: THVLFVEDDDVIREATQLALERDGFAVTAMPDGLSGLESFRADRPDIALLDVMLPGLDGVSLCRRIRDESTVPVIMLSARADSIDVVLGLEAGADDYVTKPFDGAVLVAR
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain
Protein sequence:
MGAMLNLLLVVTVILCSILSPTRFMIMIDKMVADGYDPLDPFGKIIIKWDLLLSSPGQHHVQVTLENMQEYRHVEKPGWKLSWHWLNQEVIWDMKGAETTEQGNCSAFASSGNLPHCCLERPTIVDLLPGASLNVQVANCCRGGVLTSMSQDHANHVSAFHMTVGSSPDGPEEFNMPSNFDIGVPGYSCDNATSVSPTKFSTDKGRRKTQALATWEAVCVYSQFRSSPSPKCCVSLSAFYYQNIVPCPTCSCGCSSSHCVKDGELPPYLEQKHDPDEEVSPVVKCSDHMCPIRIHWHVKVNYREYWRVKITATNFNTMKNYTNWNLVVLHPNLKSVQQVFSFNYKSLTPYQNSINDTGMFWGVQFYNDVLLQEGKIGNVQTELLLKKDMGNFTFREGWAFPRRILFNGDECVMPSPDDFPRLPKSAHSSSSSSAVISSVSVVFCFLLHHLLLLV

Annotated regions:
phrase: KCCVSLSAFYYQNIVPCPTCSCGCSSSHCVKDGELPPYLEQKHDPDEEVSPVVKCSDHMCPIRIHWHVKVNYREYWRVKITATNFNTMKNYTNWNLVVLHPNLKSVQQVFSFNYKSLTPYQNSINDTGMFWGVQFYNDVLLQEGKIGNVQTELLLKKDMGNFTFREGWAFPRRILFNGDECVMPSPDD
type: DOMAIN
name: COB_C
description: COBRA, C-terminal domain
Protein sequence:
MHLNQLVISHLACERGENRLFEGCHFSVSSGEWVQIEGHNGIGKTSLLRILAGLALPVAGEVLWNNLSIHKQRDEYYAELFYLGHYAGIKPELSAWENLRFYQKMQGLSLDDEALWFALDKVSLVERADLPCSYLSAGQQRRVALAKLWLTQQKLWILDEPFTAIDNHGVGDLIMHIERHCSLGGMAIFTSHQTVESNKVRTLSLDQFKL

Annotated regions:
phrase: LSAGQQRRVALAKL
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: GCHFSVSSGEWVQIEGHNGIGKTSLLRILAGLALPVAGEVLWNNLSIHKQRDEYYAELFYLGHYAGIKPELSAWENLRFYQKMQGLSLDDEALWFALDKVSLVERADLPCSYLSAGQQRRVALAKLWLTQQKLWILDEP
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: MHLNQLVISHLACERGENRLFEGCHFSVSSGEWVQIEGHNGIGKTSLLRILAGLALPVAGEVLWNNLSIHKQRDEYYAELFYLGHYAGIKPELSAWENLRFYQKMQGLSLDDEALWFALDKVSLVERADLPCSYLSAGQQRRVALAKLWLTQQKLWILDEPFTAIDNHGVGDLIMHIERHCSLGGMAIFTSHQTVESNKVRTLSLDQ
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain
Protein sequence:
MMAAAPIQQNGTHTGVPIDLDPPDSRKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNISYANVTGPVANSNPTGSPYANTAEVLPTAAAAAGLLGHANLAGVAAFPAVLSGFTGNDLVAITSALNTLASYGYNLNTLGLGLSQAAATGALAAAAASANPAAAAANLLATYASEASASGSTAGGTAGTFALGSLAAATAATNGYFGAASPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAAQYLITQRITYEQGVRAANPQKVG

Annotated regions:
phrase: QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNAVHGFIAEKI
type: DOMAIN
name: KH-I_NOVA_rpt1
description: RNA-binding protein Nova-1/2, type I K Homology domain 1

phrase: DVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAAQYLITQR
type: DOMAIN
name: KH-I_NOVA_rpt3
description: RNA-binding protein Nova-1/2, type I K Homology domain 3

phrase: RANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKAVELIIQKI
type: DOMAIN
name: KH_dom
description: K Homology domain

phrase: GQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNAVHGFIAEKI
type: DOMAIN
name: KH_dom
description: K Homology domain

phrase: SKDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAAQYLITQRI
type: DOMAIN
name: KH_dom
description: K Homology domain

phrase: KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEALNA
type: DOMAIN
name: KH_dom_type_1
description: K Homology domain, type 1

phrase: VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKAVELI
type: DOMAIN
name: KH_dom_type_1
description: K Homology domain, type 1

phrase: VEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAAQYLI
type: DOMAIN
name: KH_dom_type_1
description: K Homology domain, type 1

phrase: NQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKAVELIIQK
type: DOMAIN
name: KH-I_NOVA_rpt2
description: RNA-binding protein Nova-1/2, type I K Homology domain 2
Protein sequence:
MKQSKVFIPTMRDVPSEAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRNELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQAYSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKESDYAANIEKAEVVYEPNHKHTTVQPLEKIETPNVKTAQELADFLGRPVDEIVKTMIFKVDGEYIMVLVRGHHEINDIKLKSYFGTDNIELATQDEIVNLVGANPGSLGPVIDKEIKIYADNFVQDLNNLVVGANEDGYHLINVNVGRDFNVDEYGDFRFILEGEKLSDGSGAAHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQSLIMGCYGIGISRTLSAIVEQNHDDNGIVWPKSVTPFDLHLISINPKKDDQRELADALYAEFNTKFDVLYDDRQERAGVKFNDADLIGLPLRIVVGKRASEGIVEVKERLTGDSEEVHIDDLMTVITNKYDNLK

Annotated regions:
phrase: LQDRHGRQFALGPTHEELVTSIVRNELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQAYSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKESDYAANIEKAEVVYEPNHKHTTVQPLEKIETPNVKTAQELADFLGRPVDEIVKTMIFKVDGEYIMVLVRGHHEINDIKLKSYFGTDNIELATQDEIVNLVGANPGSLGPVIDKEIKIYADNFVQDLNNLVVGANEDGYHLINVNVGRDFNVDEYGDFRFILEGEKLSDGSGAAHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQSLIMGCYGIGISRTLSAIVEQ
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: LISINPKKDDQRELADALYAEFNTKFDVLYDDRQERAGVKFNDADLIGLPLRIVVGKRASEGIVEVKERLTGDSEEVHIDDLMTVIT
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: TPNVKTAQELADFLGRPVDEIVKTMIFKVDGEYIMVLVRGHHEINDIKLKSYFGTDNIELATQDEIVNLVGANPGSLGPVIDKEIKIYADNFVQDLNNLVVGANEDGYHLINVN
type: DOMAIN
name: YbaK/aa-tRNA-synth-assoc-dom
description: YbaK/aminoacyl-tRNA synthetase-associated domain

phrase: EAEAQSHRLLLKSGLIKQSTSGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRNELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQAYSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKESDYAANIEKAEVVYEPNHKHTTVQPLEKIETPNVKTAQELADFLGRPVDEIVKTMIFKVDGEYIMVLVRGHHEINDIKLKSYFGTDNIELATQDEIVNLVGANPGSLGPVIDKEIKIYADNFVQDLNNLVVGANEDGYHLINVNVGRDFNVDEYGDFRFILEGEKLSDGSGAAHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQSLIMGCYGIGISRTLSAIVE
type: DOMAIN
name: ProRS_core_prok
description: Prokaryote proline-tRNA ligase core domain

phrase: KQSTSGIYSYLPLATRVLNNITAIVRQEMERIDSVEILMPALQQAELWEESGRWGAYGPELMRLQDRHGRQFALGPTHEELVTSIVRNELKSYKQLPMTLFQIQSKFRDEKRPRFGLLRGREFIMKDAYSFHADEASLDQTYQDMYQAYSRIFERVGINARPVVADSGAIGGSHTHEFMALSAIGEDTIVYSKESDYAANIEKAEVVYEPNHKHTTVQPLEKIETPNVKTAQELADFLGRPVDEIVKTMIFKVDGEYIMVLVRGHHEINDIKLKSYFGTDNIELATQDEIVNLVGANPGSLGPVIDKEIKIYADNFVQDLNNLVVGANEDGYHLINVNVGRDFNVDEYGDFRFILEGEKLSDGSGAAHFAEGIEVGQVFKLGTKYSESMNATFLDNQGKAQSLIMGCYGIGISRTLSAIVEQNHDDNGIVW
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: PFDLHLISINPKKDDQRELADALYAEFNTKFDVLYDDRQERAGVKFNDADLIGLPLRIVVGKRASEGIVEVKERLTGDSEEVHIDDLMTVI
type: DOMAIN
name: ProRS_anticodon_short
description: Proline--tRNA ligase, anticodon binding domain
Protein sequence:
MNLASQSGEAGAGQLLFANFNQDNTSLAVGSKSGYKFFSLSSVDKLEQIYECTDTEDVCIVERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQRLIVCLEESLYIHNIRDMKVLHTIRETPPNPAGLCALSINNDNCYLAYPGSASIGEVQVFDTINLRAANMIPAHDSPLAALAFDASGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSMDGMFLSASSNTETVHIFKLEAVREKPPEEPTTWTGYFGKVLMASTSYLPSQVTEMFNQGRAFATVRLPFCGHKNICSLTTIQKIPRLLVGASDGYLYMYNLDPQEGGECALMRQHRLDGSMETTSEIVDSASHDCPLATQTYGTAAAKGAYVPSSPTRLGKGQDANLEAYTDDLGAVGGACLEDEASALRLDEDSEHPPMILRTD

Annotated regions:
phrase: QGRAFATVRLPFCGHKNICSLTTIQKIPRLLVGASDGYLYMY
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: EGQKLFEFRRGVKRCVSICSLAFSMDGMFLSASSNTETVHIF
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: NLRAANMIPAHDSPLAALAFDASGTKLATASEKGTVIRVF
type: REPEAT
name: WD40_rpt
description: WD40 repeat
Protein sequence:
MTENWKFRRRTFLKHGAQAATLAGLSGLFPETLRRALAVEPDIRTGTIQDVQHVVILMQENRSFDHYFGHLNGVRGFNDPRALKRQDGKPVWYQNYKYEFSPYHWDTKVTSAQWVSSQNHEWSAFHAIWNQGRNDKWMAVQYPEAMGYFKRGDIPYYYALADAFTLCEAYHQSMMGPTNPNRLYHMSGRAAPSGDGKDVHIGNDMGDGTIGASGTVDWTTYPERLSAAGVDWRVYQEGGYRSSSLWYLYVDAYWKYRLQEQNNYDCNALAWFRNFKNAPRDSDLWQRAMLARGVDQLRKDVQENTLPQVSWIVAPYCYCEHPWWGPSFGEYYVTRVLEALTSNPEVWARTVFILNYDEGDGFYDHASAPVPPWKDGVGLSTVSTAGEIEVSSGLPIGLGHRVPLIAISPWSKGGKVSAEVFDHTSVLRFLERRFGVVEENISPWRRAVCGDLTSLFDFQGAGDTQVAPDLTNVPQSDARKEDAYWQQFYRPSPKYWSYEPKSLPGQEKGQRPTLAVPYQLHATLALDIAAGKLRLTLGNDGMSLPGNPQGHSAAVFQVQPREVGNPRFYTVTSYPVVQESGEELGRTLNDELDDLLDANGRYAFEVHGPNGFFREFHGNLHLAAQMARPEVSVTYQRNGNLQLNIRNLGRLPCSVTVTPNPAYTREGSRRYELEPNQAISEVWLLRSSQGWYDLSVTASNTEANYLRRLAGHVETGKPSRSDPLLDIAAT

Annotated regions:
phrase: PTLAVPYQLHATLALDIAAGKLRLTLGNDGMSLPGNPQGHSAAVFQVQPREVGNPRFYTVTSYPVVQESGEELGRTLNDELDDLLDANGRYAFEVHGPNGFFREFHG
type: DOMAIN
name: PLipase_C_C
description: Bacterial phospholipase C, C-terminal domain

phrase: PEVSVTYQRNGNLQLNIRNLGRLPCSVTVTPNPAYTREGSRRYELEPNQAISEVWLLRSSQGWYDLSVTASNTEANYLRRLAG
type: DOMAIN
name: PLipase_C_C
description: Bacterial phospholipase C, C-terminal domain

phrase: MTENWKFRRRTFLKHGAQAATLAGLSGLFPETLRRAL
type: CONSERVED_SITE
name: TAT_signal
description: Twin-arginine translocation pathway, signal sequence