nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MFLSTLFLVSLATCVICGNPSSPPVVDTAHGKVLGKHVNVEGFSQPVAVFLGIPFAKPPLGSLRFAPPQPAEPWSSVKNATTYPPMCSQDAARGQAVNDLITNRKEKIHLEFSEDCLYLNIYTPADFSKNSRLPVMVWIHGGGLKLGGASSFDGRALSAYENVVVVAIQYRLSIWGFFSTGDEHSRGNWGHLDQVAALHWVQDNIANFGGDPGSVTIFGESAGGYSVSILILSPLSKNLFHRAISESGVAFIPGMFTKDVRPITEQIAVTAGCKTTTSAVIVHCMRQKTEEELLEIMHKLNLYKLSLQGDTKNSDQFVTSVLDGVVLPKDPKEILAEKNFNTVPYIVGINKQECGWLLPTMTGFLPADVKLDKKKAIALLEQFASMTGIPEDIIPVAVEKYTKGSDDPDQIREGVLDAMGDVAFGVPSVIVSRGHRDTGAPTYMYEYQYYPSFSSPQRPKNVVGDHADDVYSVFGAPILREGASEEEINLSKMVMKFWANFARNGNPNGKGLPHWPKYDQKEGYLHIGGTTQQAQRLKEEEVTFWTQSLAKKQPQPYHNEL

Annotated regions:
phrase: EDCLYLNIYT
type: CONSERVED_SITE
name: Carboxylesterase_B_CS
description: Carboxylesterase type B, conserved site

phrase: PPVVDTAHGKVLGKHVNVEGFSQPVAVFLGIPFAKPPLGSLRFAPPQPAEPWSSVKNATTYPPMCSQDAARGQAVNDLITNRKEKIHLEFSEDCLYLNIYTPADFSKNSRLPVMVWIHGGGLKLGGASSFDGRALSAYENVVVVAIQYRLSIWGFFSTGDEHSRGNWGHLDQVAALHWVQDNIANFGGDPGSVTIFGESAGGYSVSILILSPLSKNLFHRAISESGVAFIPGMFTKDVRPITEQIAVTAGCKTTTSAVIVHCMRQKTEEELLEIMHKLNLYKLSLQGDTKNSDQFVTSVLDGVVLPKDPKEILAEKNFNTVPYIVGINKQECGWLLPTMTGFLPADVKLDKKKAIALLEQFASMTGIPEDIIPVAVEKYTKGSDDPDQIREGVLDAMGDVAFGVPSVIVSRGHRDTGAPTYMYEYQYYPSFSSPQRPKNVVGDHADDVYSVFGAPILREGASEEEINLSKMVMKFWANFARNGNPNGKGLPHWPKYDQKEGYLHIGGTTQQAQRLKEEEVTF
type: DOMAIN
name: CarbesteraseB
description: Carboxylesterase, type B

phrase: FGGDPGSVTIFGESA
type: ACTIVE_SITE
name: Carboxylesterase_B_AS
description: Carboxylesterase type B, active site
Protein sequence:
MSLKQQPLPGILGLTQDDLNELFAEFGEKPYRAKQVIEWIYKHRTMEFDEMLNLPAALRDTLKERFRLRTVEHVRTQGSEDTTRKFLFKLHDGRYVETVLIPASPALYGEKSDRHTVCVSSQVGCAYGCKFCASGLDGFTRNLTADEIVGQLMAIEELADRRINNIVFMGMGEPLANFKNLNQALDVITGQWGMNIGARHITISTSGLAPMIKKLADRPQQIRLAISLHGATDETRDKIMPVNSKWKLAELTEALQYYKQRSKKRITFEYILIKGINDNLDEAHILAKRAKALGCLVNLIPYNKVEGLDWERPAEEHCYKFRDIVRSHGVVTTLRIEKGHDIDAACGQLRLKQETAEGIIKSV

Annotated regions:
phrase: ILGLTQDDLNELFAEFGEKPYRAKQVIEWIYKHRTMEFDEMLNLPAALRDTLKER
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: KSDRHTVCVSSQVGCAYGCKFCASGLDGFTRNLTADEIVGQLMAIEELADRRINNIVFMGMGEPLANFKNLNQALDVITGQWGMNIGARHITISTSGLAPMIKKLADRPQQIRLAISLHGATDETRDKIMPVNSKWKLAELTEALQYYKQRSKKRITFEYILIKGINDNLDEAHILAKRAKALGCLVNLIPYNKVEGLDWERPAEEHCYKFRDIVRSHGVVTTLRIEKGH
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SSQVGCAYGCKFCASGLDGFTRNLTADEIVGQLMAIEELADRRINNIVFMGMGEPLANFKNLNQALDVITGQWGMNIGARHITISTSGLAPMIKKLADRPQQIRLAISLHGATDETRDKIMPVNSKWKLAELTEALQYYKQRSKKRITFEYILIKGIND
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: PLPGILGLTQDDLNELFAEFGEKPYRAKQVIEWIYKHRTMEFDEMLNLPAALRDTLKERFRLRTVEHVRTQGSEDTTRKFLFKLHDGRYVETVLIPASPALYGEKSDRHTVCVSSQVGCAYGCKFCASGLDGFTRNLTADEIVGQLMAIEELADRRINNIVFMGMGEPLANFKNLNQALDVITGQWGMNIGARHITISTSGLAPMIKKLADRPQQIRLAISLHGATDETRDKIMPVNSKWKLAELTEALQYYKQRSKKRITFEYILIKGINDNLDEAHILAKRAKALGCLVNLIPYNKVEGLDWERPAEEHCYKFRDIVRSHGVVTTLRIEKGHDIDAACGQLRLKQET
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: HTVCVSSQVGCAYGCKFCASGLDGFTRNLTADEIVGQLMAIEELADRRINNIVFMGMGEPLANFKNLNQALDVITGQWGMNIGARHITISTSGLAPMIKKLADRPQQIRLAISLHGATDETRDKIMPVNSKWKLAELTEALQYYKQRSKKRITFEYILIKGINDNLDEAHILAKRAKALGCLVNLIPYNKVEGLDWERPAEEHCYKFR
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain
Protein sequence:
MEHEFWQKKWASNVIGFHLPDTNPILTQYWSALEPKRNETVFVPLCGKSMDLDWLAERHNSVTGVELSQIAVRAFFAERLYTPTVTQLSSTLELYEFDEFTIYSGDYFVAPIEAADLIYDRAALVALPKEMREEYVQVLRSRLKEGGRILLVTLDYDQNEMAGPPFSVPENEVQALFSGMKITRLQRDEADAEHPKIKKGLSRFAEEVWLIES

Annotated regions:
Protein sequence:
MVKAYLDNVRKYIPHYWPMTTFVHHNPLHGFEDMPFKEALKQASKLYKAKVYMDPDYYVELYKEGIIKRDILEKNLFEFLKSIGLQMYFAESKKFITEISQDWKYYKVKSSTTPDINLIDYFNQKIVKDEDTLFQELIEDMMLSEILDAILEDNTTDIIEKEILEFVARFLDEGQTTMSMPEREKGMFGAFKLYEGLNTSLNEEEYADTILHELSPKNVERYILNHLLKDFGWAAFIKYREDNEDYYFQQIHPASLLEYLAVRLHYEKKYLNHYPISNFVELQKAFEQNKTLFVLKLLKAKNILPSKYIDRLEEKDSPKAILSDYLSEEVFLEAYRIQNIANELLLHLDKQKDITDFAFLIEKLKEEEGYIWLKSLEDSYIKEYTIDFLQSNEKIQRDILASAVFCIDVRSEAIRRHIERLGNYNTYGVAGFFGTPIAFIEFDKGHEQYLCPALIKPQKIIFELPEDEHHDYKTKHNINYTFKKTLESLKNNPYTPFFMVEAMGWLFGVNLFGKTLFPDFTLKILSFIKAKKPKTRFTIDKLSQEEIEFYAQKFFIQKIQEAYHQEFKKHINDKKAKDLFEAIINENHKGIDERILEILKTKYNINKESFELEKIRLSNVGYTEEEQIKLVENFLKLIGLTENIPKFVLLIAHGSTSDNNPFESALDCGACGGNNGLPNVRILASIANRNQIRKGLEKVGIKIPEDTIFIPGIHNTTTDEITFYDTEVMPQKDRALFDKIVKDFKIASQKTREERAKTLPYAGSGDRI

Annotated regions:
Protein sequence:
MVIMLKFIDLFCGCGGFSRGFVEEGFEPLVAIELNEDAAFSYALNFNGQIYEKIRPGEFKLKELKGYVGIYPFKFPFEEEDIKWLKRLGTLNEKTKKLSPVVINDDIREIHAIEIEKFIKNKKVDVIIGGPPCEGYTGANPKREKNPYDRLYKDETGRLVLEYIRIVGDLQPKIFVMENVPGIKEVRGAIIKEFREIGYEDVYFNTLRAEDYGNPSVRRRVFVSNIEINPEKTQPKTVIEAIGDLMYKGRDVPNHEFAALPARFRKRVHKLGWGDAFIYFKGANRRLGNYIRLHPLKLAETVMGKRFFIHPYEDRLLTPREQARLMSYPDYHLFAGGIRSCYNQIGESVPVALSRAIARVIKENLK

Annotated regions:
Protein sequence:
MSKEPPKNSREKTKNLLLKLQDNICKGLENIDGKAKFTEESWLREEGGGGKSRVLKNGSIFEQAGVNFSEVHGKELPQSIISQRPEAKGHKWFATGTSMVLHPKNPFIPTVHLNYRYFEAGPVWWFGGGADLTPYYPYLTDVRNFHKEHCNACEKVNKNLHKVFKPWCDEYFFLKHRNESRGIGGIFYDYQDGSGRIYKGNNKESKAYKESINIGELNLNWNNLFSLAENCGGAFLDSYQPIIEKRVNQNYTKEQREFQLYRRGRYVEFNLVWDRGTIFGLQTNGRTESILMSLPPLARWEYGYKAKKGSREDYLTKIFTKPQDWQNDKILEKFCKENNIFD

Annotated regions:
phrase: KPWCDEYFFLKHRNESRGIGGIFY
type: CONSERVED_SITE
name: Coprogen_oxidase_CS
description: Coproporphyrinogen III oxidase, conserved site
Protein sequence:
MNAITLVHSGHVPVMLHEVLEALSPRAGGRYLDGTFGGGGYARAILNAADCTLDAIDRDPAAIERGNAMAVQANGRLRMHQGTFGDMEALAGAEGPFDGIVLDLGVSSFQIDQAERGFSFRNDGPLDMRMGSDGPSAADLVNTCKEAELADILYRYGEEKLSRRIARAIVAARAEAPITTTGQLAHIIRCCVPRDRANIDPATRSFQGLRIAVNDELGELERALEAAPRLLAPGGIFVVVTFHSLEDRLAKRAMAVLAGRTGNPSRYEPAPLRQEAPAFSLLYSRPLSATDEESRENPRARSARLRALVCNPAPKMPVSGMPS

Annotated regions:
Protein sequence:
MDKLGVDLPLLISQIVNFCLLAFLLNTFLYKPVLNALQARSERIRESLDNAEKVKQQLARVDADYEAKLQEARREGQTIISQAQERARAQEAELLVVARNNAAKIEEEARGKVEQERQQVLRGLQGQLASLVTETASNVLGRELQTKGHDELINKSIDQLGRLN

Annotated regions:
Protein sequence:
MARSLKKAPFVDDHLMKKVLAIIENKSPKRPIKTWSRRSTIYPEFIGLTFQVHNGHAFIDVFVTNDMVGHKLGEFAPTRTFNGHGADKGKK

Annotated regions:
phrase: NGHAFIDVFVTNDMVGHKLGEFAP
type: CONSERVED_SITE
name: Ribosomal_uS19_CS
description: Small ribosomal subunit protein uS19, conserved site
Protein sequence:
MMLNKKVVALCTLTLHLFCIFLCLGKEVRSEENGKIQDDAKKIVSELRFLEKVEDVIEKSNIGGNEVDADENSFNPDTEVPIEEIEEIKMRELKDVKEEKNKNDNHNNNNNNISSSSSSSSNTFGEEKEEVSKKKKKLRLIVSENHATTPSFFQESLLEPDVLSFLESKGNLSNLKNINSMIIELKEDTTDDELISYIKILEEKGALIESDKLVSADNIDISGIKDAIRRGEENIDVNDYKSMLEVENDAEDYDKMFGMFNESHAATSKRKRHSTNERGYDTFSSPSYKTYSKSDYLYDDDNNNNNYYYSHSSNGHNSSSRNSSSSRSRPGKYHFNDEFRNLQWGLDLSRLDETQELINEHQVMSTRICVIDSGIDYNHPDLKDNIELNLKELHGRKGFDDDNNGIVDDIYGANFVNNSGNPMDDNYHGTHVSGIISAIGNNNIGVVGVDVNSKLIICKALDEHKLGRLGDMFKCLDYCISRNAHMINGSFSFDEYSGIFNSSVEYLQRKGILFFVSASNCSHPKSSTPDIRKCDLSINAKYPPILSTVYDNVISVANLKKNDNNNHYSLSINSFYSNKYCQLAAPGTNIYSTAPHNSYRKLNGTSMAAPHVAAIASLIFSINPDLSYKKVIQILKDSIVYLPSLKNMVAWAGYADINKAVNLAIKSKKTYINSNISNKWKKKSRYLH

Annotated regions:
phrase: ICVIDSGIDYN
type: ACTIVE_SITE
name: Peptidase_S8_Asp-AS
description: Peptidase S8, subtilisin, Asp-active site

phrase: LRLIVSENHATTPSFFQESLLEPDVLSFLESKGNLSNLKNINSMIIELKEDTTDDELISYIKILEEKGALIESDKLVSA
type: DOMAIN
name: SUB1_ProdP9
description: SUB1 protease prodomain ProdP9

phrase: GTSMAAPHVA
type: ACTIVE_SITE
name: Peptidase_S8_Ser-AS
description: Peptidase S8, subtilisin, Ser-active site

phrase: HGTHVSGIIS
type: ACTIVE_SITE
name: Peptidase_S8_His-AS
description: Peptidase S8, subtilisin, His-active site

phrase: TRICVIDSGIDYNHPDLKDNIELNLKELHGRKGFDDDNNGIVDDIYGANFVNNSGNPMDDNYHGTHVSGIISAIGNNNIGVVGVDVNSKLIICKALDEHKLGRLGDMFKCLDYCISRNAHMINGSFSFDEYSGIFNSSVEYLQRKGILFFVSASNCSHPKSSTPDIRKCDLSINAKYPPILSTVYDNVISVANLKKNDNNNHYSLSINSFYSNKYCQLAAPGTNIYSTAPHNSYRKLNGTSMAAPHVAAIASLIFSINPDLSYKKVIQILKDS
type: DOMAIN
name: Peptidase_S8/S53_dom
description: Peptidase S8/S53 domain

phrase: ICVIDSGIDYNHPDLKDNIELNLKELHGRKGFDDDNNGIVDDIYGANFVNNSGNPMDDNYHGTHVSGIISAIGNNNIGVVGVDVNSKLIICKALDEHKLGRLGDMFKCLDYCISRNAHMINGSFSFDEYSGIFNSSVEYLQRKGILFFVSASNCSHPKSSTPDIRKCDLSINAKYPPILSTVYDNVISVANLKKNDNNNHYSLSINSFYSNKYCQLAAPGTNIYSTAPHNSYRKLNGTSMAAPHVAAIASLIFSINPDLSYKKVIQILKD
type: DOMAIN
name: PfSUB1-like_cat_dom
description: Subtilisin SUB1-like catalytic domain
Protein sequence:
MQAILEHLYQGGRISREQSQQLFGAIIQGQLAPEQLAAALISMKVRGEYSEEIAGAASALLADASPFPRPDYTFADIVGTGGDGSNSINISTASAIVAAGCGARVAKHGNRSVSSCSGSSDLLAAFGIRLDMPAALSRQALDELGICFLFAPQYHSGFSHAMPVRQLLKTCTLFNVLGPLINPARPPLALIGVYSPELVLPIAETLRVLGYQRAAVVHGGDMDEVALHAPTHVAELREGTIENYTLNAADFGLSAQPAEALRGGSPEENRDILARLLQGKGEHAHESAVAANVALLLKLFGQENLRDNTHRALEEIHSGAPYARVMALAARG

Annotated regions:
phrase: YTFADIVGTGGDGSNSINISTASAIVAAGCGARVAKHGNRSVSSCSGSSDLLAAFGIRLDMPAALSRQALDELGICFLFAPQYHSGFSHAMPVRQLLKTCTLFNVLGPLINPARPPLALIGVYSPELVLPIAETLRVLGYQRAAVVHGGDMDEVALHAPTHVAELREGTIENYTLNAADFGLSAQPAEALRGGSPEENRDILARLLQGKGEHAHESAVAANVALLLKLFGQENLRDNTHRALEEIHSG
type: DOMAIN
name: Glycosyl_Trfase_fam3
description: Glycosyl transferase, family 3

phrase: AILEHLYQGGRISREQSQQLFGAIIQGQLAPEQLAAALISMKVRGEYSEEIAGAASALL
type: DOMAIN
name: Glycosyl_Trfase_fam3_N_dom
description: Glycosyl transferase family 3, N-terminal domain
Protein sequence:
MKFYTISSKYIEYLKEFDDKVPNSEDPTYQNPKAFIGIVLEIQGHKYLAPLTSPKKWHNNVKESSLSCFKLHENGVPENQLGLINLKFMIPIIEAEVSLLDLGNMPNTPYKRMLYKQLQFIRANSDKIASKSDTLRNLVLQGKMQGTCNFSLLEEKYRDFGKEAEDTEEGE

Annotated regions:
Protein sequence:
QGPLGTTQSAFLSLHFGDAKPRVRLPEEASSPPLASDRGSCTCTDSCKCEGCKCTSCKKSCCSCCPAECKKCAKDCVCKGGEGAEAEAEKCSCCQ

Annotated regions:
phrase: CTCTDSCKCEGCKCTSCK
type: BINDING_SITE
name: Metalthion_vert_metal_BS
description: Metallothionein, vertebrate, metal binding site
Protein sequence:
MRDKTGPKFGPYQPDDEAVSPSRRRLILGMGMVSGALVLGGAKTAQAADCRSPDVAGTQDERWQKQPFYGQHQAGVLTPQQAAMMLVAFDVLATDKTSLIRLFKLLTERLAFLTTGGRAPSVNAKLPPLDSGIMGPEIYPDNLTVTVSVGNALFDERFGLQGQKPLRLQRMTRFPNDSLDAGLCHGDVMLQICANTNETVIHALRDIIKHTPDLLSVRWKREGFISAHAARSKGQETPINLLGFKDGTANPKISNKPLINNVVWVSNNAGEPAWAVGGSYQVVRIIRFKVEFWDRTPLQEQQTIFGRDKNSGAPLGMQHEHDEPNYAKDPEGKVIPMDAHIRLANPRTIETQRNLMLRRGYSYSLGVSNSGQLDMGLLFVCYQSDLAQAFLTVQERLNGEALEEYVKPIGGGYFFTLPGVADANHYLAQSLLEA

Annotated regions:
phrase: QAGVLTPQQAAMMLVAFDVLATDKTSLIRLFKLLTERLAFLTTGGRAPSVNAKLPPLDSGIMGPEIYPDNLTVTVSVGNALFDERFGLQGQKPLRLQRMTRFPNDSLDAGLCHGDVMLQICANTNETVIHALRDIIKHTPDLLSVRWKREG
type: DOMAIN
name: Dyp_perox_N
description: Dyp-type peroxidase, N-terminal domain

phrase: TPINLLGFKDGTANPKISNKPLINNVVWVSNNAGEPAWAVGGSYQVVRIIRFKVEFWDRTPLQEQQTIFGRDKNSGAPLGMQHEHDEPNYAKDPEGKVIPMDAHIRLANPRTIETQRNLMLRRGYSYSLGVSNSGQLDMGLLFVCYQSDLAQAFLTVQERLNGEALEEYVKPIGGGYFFTLPG
type: DOMAIN
name: Dyp_perox_C
description: Dyp-type peroxidase, C-terminal domain

phrase: MRDKTGPKFGPYQPDDEAVSPSRRRLILGMGMVSGALVLGGAKTAQ
type: CONSERVED_SITE
name: TAT_signal
description: Twin-arginine translocation pathway, signal sequence
Protein sequence:
MRLSKTLVDMDMADYSAALDPAYTTLEFENVQVLTMGNDTSPSEGTNLNAPNSLGVSALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNERDRISTRRSSYEDSSLPSINALLQAEVLSRQITSPVSGINGDIRAKKIASIADVCESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDNLLQEMLLGGSPSDAPHAHHPLHPHLMQEHMGTNVIVANTMPTHLSNGQMCEWPRPRGQAATPETPQPSPPGGSGSEPYKLLPGAVATIVKPLSAIPQPTITKQEVI

Annotated regions:
phrase: CAICGDRATGKHYGAS
type: DOMAIN
name: Znf_hrmn_rcpt
description: Zinc finger, nuclear hormone receptor-type

phrase: SCDGCKGFFRRSVRK
type: DOMAIN
name: Znf_hrmn_rcpt
description: Zinc finger, nuclear hormone receptor-type

phrase: RNQCRYCR
type: DOMAIN
name: Znf_hrmn_rcpt
description: Zinc finger, nuclear hormone receptor-type

phrase: LKKCFRAG
type: DOMAIN
name: Znf_hrmn_rcpt
description: Zinc finger, nuclear hormone receptor-type

phrase: SALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQ
type: DOMAIN
name: Znf_hrmn_rcpt
description: Zinc finger, nuclear hormone receptor-type

phrase: SALCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKK
type: DOMAIN
name: Znf_hrmn_rcpt
description: Zinc finger, nuclear hormone receptor-type

phrase: CAICGDRATGKHYGASSCDGCKGFFR
type: DOMAIN
name: Znf_hrmn_rcpt
description: Zinc finger, nuclear hormone receptor-type

phrase: DIRAKKIASIADVCESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKL
type: DOMAIN
name: Nucl_hrmn_rcpt_lig-bd
description: Nuclear hormone receptor, ligand-binding domain

phrase: CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMKKEAVQNER
type: DOMAIN
name: HNF4-like_DBD
description: Hepatocyte nuclear factor 4-like, DNA-binding domain

phrase: SSLPSINALLQAEVLSRQITSPVSGINGDIRAKKIASIADVCESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDNLLQEMLLG
type: DOMAIN
name: Nucl_hrmn_rcpt_lig-bd
description: Nuclear hormone receptor, ligand-binding domain

phrase: LCAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCRFSRQCVVDKDKRNQCRYCRLKKCFRAGMK
type: DOMAIN
name: Znf_hrmn_rcpt
description: Zinc finger, nuclear hormone receptor-type

phrase: ESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSI
type: DOMAIN
name: Nucl_hrmn_rcpt_lig-bd
description: Nuclear hormone receptor, ligand-binding domain

phrase: SINALLQAEVLSRQITSPVSGINGDIRAKKIASIADVCESMKEQLLVLVEWAKYIPAFCELPLDDQVALLRAHAGEHLLLGATKRSMVFKDVLLLGNDYIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYAYLKAIIFFDPDAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMIEQIQFIKLFGMAKIDNLLQE
type: DOMAIN
name: HNF4_LBD
description: Hepatocyte nuclear factor 4, ligand-binding domain
Protein sequence:
RSGKLDAFLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKLRNWQWWRLFTK

Annotated regions:
phrase: RSGKLDAFLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKLRNWQWWRLFT
type: DOMAIN
name: Myosin_head_motor_dom-like
description: Myosin head, motor domain-like

phrase: SGKLDAFLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKLRN
type: DOMAIN
name: Myosin_head_motor_dom-like
description: Myosin head, motor domain-like
Protein sequence:
MNSPGLRKPTIWRPLLLLFPLLALLLSMSSPRLPDEVMLHITPLHQGMTLPDGFYIYQRLNERGIAIKSITPENNSIIVRLSSPEQSGAAKEILSIALPNTVVIAQRTHGTIRVARS

Annotated regions:
phrase: KPTIWRPLLLLFPLLALLLSMSSPRLPDEVMLHITPLHQGMTLPDGFYIYQRLNERGIAIKSITPENNSIIVRLSSPEQSGAAKEILSIALPNTVVIA
type: DOMAIN
name: SecD-TM
description: SecD export protein N-terminal TM domain
Protein sequence:
MISVCPQNDLQKCYRSLTFDVPGQQFEERNEQNLKKRAKKKGSFQPSVAFDTVPSTAGYSSIDDSREGFKGVPVPNYYTMEECYDDETDSFSPNLQYYLRDTFQSSPFLNTRKENKSESSSFPMRSSKLLEKNSDIKKYFLVSKNGKIVRRDYPSTPVIVNETLMINRFEKNWIKLWRQRKLQINERLNDKKKWFTYPELIFSEERIKPLYRGDDSAPCTKEQKRKHKILQQKVGYPNNPKTIVCHINGKKHTWVALDWTVYKFARNLDHIVVITTLPKMISNRKKTAKDDTEWAPGYQKEVIDQKLNDIFDYILQLVKVVKISVKITLEIIVGKIKKSLVDVINVHTPDFLVLATLKHERNENLITYKSKKLTDVFPVSYPIPTFVVPSKRMYSFELNLQREVNEHYVSKNHMKHEHTDVESMSSSMFKKNTISDISSHISVDSYAEDFKRQGYIKKQFNTSNDSIPRKLTGLAQHSRRKITGDIEKLQDDEKDRECTKEKLLLKKIDIIIRESLKSSLAIETLPGKNVSQSSHGDQISSFKNALIGNGSKNTKFRKSLIPYSSSEEQNTTTTIKLSSSPTSQIKFATSVKHKDGRAALGKARNLPDIRHSISFDKENSFDPSDKSSSVDNSIPLRKVKSAGALRKVKTNDSSSSAGSKKSSSSFSTVNTFTGGGVGIFKVFKSGSSSGNKSSSRRNSSSGDVFESDDRNDKKKKKKKKKKSLFLFGKI

Annotated regions:
Protein sequence:
MSDVRSDKPFVLAGRTFESRLLVGTGKYIDMEQTRLAIEASGAEIVTVAVRRTNLGQNPGEPNLLDVLPPDRYTILPNTAGCFDAVEAVRTCRLSRELLDGRNLVKLEVLADQKTLFPNVIETLKAAEILVKDGFDVMVYTSDDPIIARQLAEIGCIAIMPLAGLIGSGLGICNPYNLQIILEETKVPVLVDAGVGTASDATIAMELGCEAVLMNSAIAHAQQPVMMAEAMKHAVIAGRLAYLAGRMPRKLYASASSPLDGLIK

Annotated regions:
phrase: LAGRTFESRLLVGTGKYIDMEQTRLAIEASGAEIVTVAVRRTNLGQNPGEPNLLDVLPPDRYTILPNTAGCFDAVEAVRTCRLSRELLDGRNLVKLEVLADQKTLFPNVIETLKAAEILVKDGFDVMVYTSDDPIIARQLAEIGCIAIMPLAGLIGSGLGICNPYNLQIILEETKVPVLVDAGVGTASDATIAMELGCEAVLMNSAIAHAQQPVMMAEAMKHAVIAGRLAYLAGRMPRKLYASASS
type: DOMAIN
name: Thiazole_synthase_ThiG
description: Thiazole synthase ThiG
Protein sequence:
MAATTEKDLTARTTANIEAASDTVSLEEKSEREILERPNEITQDAQIGVQKAEATALVWSKTALYATYAWIWVCFFILNLQFSISNNMIYYAYAGFSSAPQISQAYILSTIIGGVLQLPIAKTLNLWGRAEGFLVFVGVLIVGIIVIASCNGPNGFAAGYTLYWIGYTAVNFILVVFVADASGLRNRAFAYAFIGTPTICTAFVGPLAAQAFYAHSTWRWAYGCFAIVIFFTFVPLALVFKFYQRKAEKTGVFVRDPSGRTPLQSFRHYFREFDLVGAFLLMAAFVLFLLPFSLETYGFSGYSSATFISMVVIGVLLFPVFAIWERFFAPTAFIKWQLFKNRTVLGACILAAVIFFNYYTWDQYYYYYLQVVYNLNTANTGYMTQIYSVGSTLWAVLFGIWIRQTKHFQKTCLYFGAPLMLLGAGLMIHFRGAESKIGYLVMCQIFIAFGGGTLVIGDEMAVMAAADRDGVPMMIAMISLAGSFGGAIGYAVAGAIYANTFPQALLRGLPDDLKGDSATVYLGGSTAQVMYPPGSAARNAINHAWTESQKYECITATAVVVLAFPAIAMWKNYNVDRKQVKGTVI

Annotated regions:
Protein sequence:
MSDEKYNAKLDQAGGKLKEGFGKISGDKSLETEGKVDKVTGKVKEVIVDAKDTVKGLAKGLDNKDK

Annotated regions:
phrase: KYNAKLDQAGGKLKEGFGKISGDKSLETEGKVDKVTGKVKEVIVDAKDTV
type: DOMAIN
name: CsbD
description: CsbD-like domain
Protein sequence:
MEATRNLVSSSPSFQTKTHLKSSYSSPSSVVMLHDQTTTPVVNSRHLNSLSRHFPASVLSQEPREESRPLSHALRDDRTSQLTLERRQFDELVSSREDEKFEQQLLHSTGLWNLLISPLTSETKLPAVVSPLADAELCDVVALAQKALSASKQAALLVDDTEANPSDNIKDSLSTSSSMSLPEKGNIVRSKRQLERRAKNRRAPKSNDVDDEGYVPQKTSAKKKYKQGADNDDALQLFLWGPETKQLLTAKEEAELISHIQHLLKLEKVKTKLESQNGCEPTIGEWAEAMGISSPVLKSDIHRGRSSREKLITANLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFATYAYWWIRQSIRKSIFQNSRTIRLPENVYMLLGKVSEARKTCVQEGNYRPSKEELAGHVGVSTEKLDKLLYNTRTPLSMQQPIWSDQDTTFQEITPDSGIETPTMSVGKQLMRNHVRNLLNVLSPKERRIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRALYRLKQNMNSHGLHAYADLLV

Annotated regions:
phrase: LITANLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFATYAYWWIRQSIRKSIFQNS
type: DOMAIN
name: RNA_pol_sigma70_r2
description: RNA polymerase sigma-70 region 2

phrase: LLGKVSEARKTCVQEGNYRPSKEELAGHVGVSTEKLDKLLYNTRTPLSMQQPIWSDQDTTFQEITPDSGIETPT
type: DOMAIN
name: RNA_pol_sigma70_r3
description: RNA polymerase sigma-70 region 3

phrase: LLNVLSPKERRIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRALYRLK
type: DOMAIN
name: RNA_pol_sigma70_r4
description: RNA polymerase sigma-70 region 4

phrase: SLSEIGEIYGLSKERVRQLESRALYR
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: DLLQEGSMGLMKS
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: FATYAYWW
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: LSPKERRIIKLR
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: SLSEIGEIYGLSKER
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: VRQLESRALYR
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: SREKLITANLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQSGCRFATYAYWWIRQSIRKSIFQNSRTIRLPENVYMLLGKVSEARKTCVQEGNYRPSKEELAGHVGVSTEKLDKLLYNTRTPLSMQQPIWSDQDTTFQEITPDSGIETPTMSVGKQLMRNHVRNLLNVLSPKERRIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRALYRLKQN
type: DOMAIN
name: RNA_pol_sigma-70_dom
description: RNA polymerase sigma-70-like domain

phrase: DLLQEGSMGLMKS
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70
Protein sequence:
MQLTSASVCLLWMGLLSWVSHRIDASQGFPSPLKRCKLQEESCLVAQAQTFFQAFQKGIPERQVAALEPIDLGTMRIESGGHSESLKFKLVMSDAKLYNLANSVVVKSLKGFTKDLTKPLKLTLLMDTPELEVRAKYDVDGKLLILPIVSKGDLTIRMNEVQTKRRITAEPVKRSDGHSYLNITDYKTITKIKGGHFDLSNLFDDNKELRESTLKVLNQEWNTLALDVQPKINEACSKAFRAILQSLWANIPYDEFFKAE

Annotated regions:
Protein sequence:
MNHSRSHALFVQAQTRIPGGVNSPVRAFRSVGGEPFFVARADGPYLFDVDGHRYIDYVGSWGPMIVGHNHPAVREAVQVAISNGLSYGAPCAAEVTMAETIARLVPSCEMVRMVNSGTEATLSAIRLARGATGRNYIVKFEGCYHGHGDSFLVKGGSGMLTLGIPSSPGVPAELSKLTITLTYNDFDAATALFEEMGHHIAAVIVEPVIGNANCIPPQPGYLQHLRTLCTQYAVLLIFDEVMTGFRVALGGAQALYGVTPDLTTFGKIIGGGMPVGAYGGRRDLMQHIAPTGPIYQAGTLSGNPVAMAAGLAMLELIQAPDFYTHLSNAAAALCTGLQQAASQAGIAMTTQQIGGMFGLFFTDQQVETYAQATACNTDRFNRFFHAMLQRGVFFAPSAYEAGFISSAHSPNIIETTLEAARTAFQTIANEAAILSKSETPIKMR

Annotated regions:
phrase: LIFDEVMTGFRVALGGAQALYGVTPDLTTFGKIIGG
type: CONSERVED_SITE
name: Aminotrans_3_PPA_site
description: Aminotransferases class-III pyridoxal-phosphate attachment site
Protein sequence:
MKKAILGKKLGMTQIFNENGKVIPVTVIEAGPCTVIQKKTVEKDGYEAIQVAFGDIREKLRNKPVKGHFAKAGVSVKRHIKEFKLEDLNSLEIGQEIKADVFEAGERVDISGVSKGKGFQGTIRRWNAHRGPMSHGSKFHRAVGSMGASSDPSRTFKNKRMPGHMGNVNTTVLNLEVVRIIPEKNLILIKGGVPGPNKGLVQIRNTVKA

Annotated regions:
phrase: FEAGERVDISGVSKGKGFQGTIR
type: CONSERVED_SITE
name: Ribosomal_uL3_CS
description: Large ribosomal subunit protein uL3, conserved site
Protein sequence:
MSGPGTAAVALLPAVLLALLAPWAGRGGAAAPTAPNGTLEAELERRWESLVALSLARLPVAAQPKEAAVQSGAGDYLLGIKRLRRLYCNVGIGFHLQALPDGRIGGAHADTRDSLLELSPVERGVVSIFGVASRFFVAMSSKGKLYGSPFFTDECTFKEILLPNNYNAYESYKYPGMFIALSKNGKTKKGNRVSPTMKVTHFLPRL

Annotated regions:
Protein sequence:
METDSMECVSSTGNEIHQNGNGHQSYQFSSTKTHGGAAAAAVVTNIVGPTATAPATSVYELLECPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTCRQELGDIRCLALEKVAESLELPCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPFLVAHLRDDHKVDMHAGSTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMGPVYMAFLRFMGDEEDARSYSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRNMALFFSGGDRKELKLRVTGKIWKEQHSPDSGLSIPNLSSS

Annotated regions:
phrase: CPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPTC
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: FHCFGQYFCLHFEAFQLGMGPVYMAFLRFMGDEEDARSYSYSLEVGGSGRKLTWEGTPRSIRDSHRKVRDSNDGLIIQRNMALFFSGGDRKELKLRV
type: DOMAIN
name: 7-in-absentia-prot_TRAF-dom
description: Seven-in-absentia protein, TRAF-like domain

phrase: CPVCTYSMYPPIHQCHNGHTLCSTCKVRVHNRCPT
type: DOMAIN
name: Sina-like_RING
description: E3 ubiquitin-protein ligase Sina-like, RING finger

phrase: SLELPCKFYNLGCPEIFPYYSKLKHESLCNFRPYSCPYAGSECGIVGDIPFLVAHLRDDH
type: DOMAIN
name: Znf_SIAH
description: Zinc finger, SIAH-type
Protein sequence:
MSETPLIDAMLAEHAELEKQLADPALHADAAAARKAGRRFAMLSPIVATHRKLATARDDLATARELSADDPSFADEVTELESSIAELETQLSDMLAPRDPHDGDDILLEVKSGEGGEESALFAADLARMYIRYAERHGWKVTVLDETESDLGGYKDATLAIASKGDSADGVWSRLKFEGGVHRVQRVPVTESQGRVHTSAAGVLVYPEPEEVEEIQIDESDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQALAEEQAQADASAGRASQIRTVDRSERIRTYNFPENRITDHRVGFKAHNLDQVLDGDLDALFDALAAADRKARLQEA

Annotated regions:
phrase: EVEEIQIDESDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLAARLQALAEEQAQADASAGRASQIRTVDRSERIRTYNFPENRITDH
type: DOMAIN
name: Pep_chain_release_fac_I
description: Peptide chain release factor class I

phrase: RSSGKGGQGVNTTDSA
type: DOMAIN
name: Pep_chain_release_fac_I
description: Peptide chain release factor class I

phrase: ELSADDPSFADEVTELESSIAELETQLSDMLAPRDPHDGDDILLEVKSGEGGEESALFAADLARMYIRYAERHGWKVTVLDETESDLGGYKDATLAIASKGDSADGVWSRLKF
type: DOMAIN
name: PCRF
description: Peptide chain release factor

phrase: AEHAELEKQLADPALHADAAAARKAGRRFAMLSPIVATHRKLATARDDLATARELSADDPSFADEVTELESSIAELETQLSDMLAPRDPHDGDDILLEVKSGEGGEESALFAADLARMYIRYAERHGWKVTVLDETESDLGGYKDATLAIASKGDSADGVWSRLKFEGGVHRVQRVPVTESQGRVHTSAAG
type: DOMAIN
name: PCRF
description: Peptide chain release factor