nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MRLNTLSPAVGAKSAPKRVGRGIGSGLGKTAGRGHKGQKSRSGGGVRPGFEGGQMPLKIRLPKFGFTSRVSMVTAEVRLGELAKVNGDVIDLNALKDANVVTRNIQFAKVVLSGTIERPVTVKGLKVTKGARAAIEAAGGKIEE

Annotated regions:
phrase: KVVLSGTIERPVTVKGLKVTKGARAAIEAA
type: CONSERVED_SITE
name: Ribosomal_uL15_CS
description: Large ribosomal subunit protein uL15, conserved site

phrase: AKVNGDVIDLNALKDANVVTRNIQFAKVVLSGTIERPVTVKGLKVTKGARAAIEAAGGKI
type: DOMAIN
name: Ribosomal_uL15/eL18
description: Large ribosomal subunit protein uL15/eL18
Protein sequence:
MAGKEVIFIMALFIAVESSPIFSFDDLVCPSVTSLRVNVEKNECSTKKDCGRNLCCENQNKINVCVGGIMPLPKPNLDVNNIGGAVSESVKQKRETAESLSGSFDKEKASAENLSGSFDQQKSSVDEKSGSVGQQKGAVEGQSGSGEQRRETAESQSGSVDQEKASAENLSGSIDKQKVTVEEKSEPAQGQSGSVKQKRKTTENVSGSLDQEKASAESLSGSFDQQKSSVDEKSGSVGNDDDISVQ

Annotated regions:
Protein sequence:
MKKPVDFFAMKENGEKITMITAYDYPSAKNVEQAEADMILVGDSLGMVVLGYDSTVPVTMNDMIHHTKAVKRGAPNTFVVTDMPFMTYHGSVDETIQNARKIIQESGAHAVKLEGAGEVVNKIARLTEAGAPVVAHLGLTPQSVGLTGSYKVRAKSVQEAQELIDNALAVEAAGAIAIVLEAIPRQLAEKVTKALTIPTIGIGAGLETDGQVLVYHDIIGYGINRRAKFVKAYADIDETIEPALKNYVNDVKELAFPEVKHSFTMAEEDLKGLYGRE

Annotated regions:
Protein sequence:
MSGHNKWASIKHKKTATDVKKGKVFTKIIREIVVATKESGAQIENNARLRKAIEDAKEANMPQDNIKKAIQRGTGEIPGAIYEEMVYEGYGPAGVALIVEVTTDNKNRTASDIRKMFSSHNGNLGEAGCVGWMFERKGYITVKKSAADEEIVMNTVLEAAVEDFKSEADSDVYEIITLSSDLETVKNVLKEKNITVESAEVTMVPQTQIALKSDNAKNMLKLMDALEDHDDVKNVYANFDISSEDMEKLNA

Annotated regions:
phrase: YEEMVYEGYGPAGVALIVEVTTDNKNRTASDIRKMFSSHNGNLGEAGCVGWMFERKGYITVKKSAADEEIVMNTVLEAAVEDFKSEADSDVYEIITLSSDLETVKNVLKEKNITVESAEVTMVPQTQIALKSDNAKNMLKLMDALEDHDDVKNVYAN
type: DOMAIN
name: TACO1_YebC-like_2nd/3rd_dom
description: TACO1/YebC-like, second and third domains

phrase: NKWASIKHKKTATDVKKGKVFTKIIREIVVATKESGAQIENNARLRKAIEDAKEANMPQDNIKKAIQRGTG
type: DOMAIN
name: TACO1_YebC_N
description: TACO1/YebC-like, N-terminal domain
Protein sequence:
MAMFLKSRGVRSCRDRRLLSDEEEETSQSSSYTLGSQASQSIQEEDVSDTDESDYSDEDEEIDLEEEYPSDEDPSEGSDSDPSWHPSDSDESDYSESDEDEATPGSQASRSSRVSPSTQQSSGLTPTPSFSRPRTRAPPRPPAPAPVRGRASAPPRPPAPVQQSTKDKGPHRPTRPVLRGPAPRRPPPPSSPNTYNKHMMETTPPIKGNNNYNWPWL

Annotated regions:
Protein sequence:
MKRPLIIGVGGPVGAGKTMLIERLTRYLSTKGYSMAAITNDIYTKEDARILLNTSVLPADRIAGVETGGCPHTAIREDASMNFAAIEEMCDKHPDLQLLFLESGGDNLSATFSPDLVDFSIYIIDVAQGEKIPRKGGQGMIKSDLFIINKVDLAPYVGANVEVMKADTLKSRGNKDFFVTNLKTDEGLKSVADWIEKRLQLALLEE

Annotated regions:
phrase: IIGVGGPVGAGKTMLIERLTRYLSTKGYSMAAITNDIYTKEDARILLNTSVLPADRIAGVETGGCPHTAIREDASMNFAAIEEMCDKHPDLQLLFLESGGDNLSATFSPDLVDFSIYIIDVAQGEKIPRKGGQGMIKSDLFIINKVDLAPYVGANVEVMKADTLKSRGNKD
type: DOMAIN
name: CobW/HypB/UreG_nucleotide-bd
description: CobW/HypB/UreG, nucleotide-binding domain
Protein sequence:
MAGYVVVGTQWGDEGKGKIIDVLSEKADYVVRFQGGNNAGHTVVVDGEKFILQLLPSGVLQAGTCVIGPGVVIDPKVFLDEIDRIEKRGAKTDHVIISDRAHVIMPYHIEMDKIRESVEDRIKIGTTKKGIGPCYADKISRDGIRMSDLLDLKQFEEKLRYNLKEKNEIFTKIYGLEPLDFDTIFEEYKGYAEKIKHRIVDTIPMVNKALDENKLVLFEGAQAMMLDINYGTYPYVTSSSPTLGGVTTGAGISPRKIDKGIGVMKAYTTRVGEGPFVTEIKGEFGDKIRGIGGEYGAVTGRPRRCGWLDLVVGRYATEINGLTDIVMTKIDVLSGLGKLKICTAYEIDGVIHEYVPADTKSLDRAIPIYEELDGWDEDITQIKKYEDLPVNCRKYLERVQEILGCPISVVSVGPDRSQNIHIREI

Annotated regions:
phrase: QWGDEGK
type: BINDING_SITE
name: Adenylosuccin_syn_GTP-bd
description: Adenylosuccinate synthase, GTP-binding site

phrase: GIGPCYADKIS
type: ACTIVE_SITE
name: Adenylosuccin_syn_Lys_AS
description: Adenylosuccinate synthase, active site
Protein sequence:
MILFPAIDLKDGQCVRLKLGDMDQATVYNEDPAAQAKAFEDQGFEWLHVVDLNGAFAGESVNGKAVEAILKATKNPVQLGGGIRTLQHIENWLSKGLRRVILGTVAVRDPALVIEACKAFPGQVAVGIDAKGGYVAVEGWAEASELGVIELAKKFEGAGVAAIIYTDIDRDGVLAGINWDSTLGLADSVSIPVIASGGLASMDDIKRLAAPDARKLEGAISGRALYDGRIDPAEALSLLRAAA

Annotated regions:
Protein sequence:
MSDIVWHQHSIDKQSRADQKGQKPILLWFTGLSGSGKSTLAGALERALFDAGFHTYLLDGDNVRHGLCKDLGFSLDDRDENLRRVGEVAKLMVDAGLVVLSAFISPTRAERERVRALFDDGQFIEVHVSTPIEVCEARDPKGLYSKARAGEIKNFTGISASYEVPTAAELIIDTSKGDLATQVSALLDYLAAIQVIDSEKLKKAI

Annotated regions:
Protein sequence:
MIPALWIAKTGLDAQQINMNVIANNLANVNTNGFKRSKAIFEDLIYHTVQQPGSKSSEETISPSGFQLGTGVRPITTEREHSQGNLSKTNSLKDVAINGNGFFQVQLPDGNAAYTRDGSFQINPNGQLVTNNGFLIQPVINFPANGNNMSVSRDGIITVRIPEQTQPIRVGKLYLANFVNDSGLSNIGENLYQETEASGNPSISSPGSHGTGLLYQSYVETSNVNIAEELVNMIQAQRAYEINSKVITTADQMLQKLSLL

Annotated regions:
phrase: QSYVETSNVNIAEELVNMIQAQRAYEINSKVITTADQMLQKL
type: DOMAIN
name: Flg_bb/hook_C_dom
description: Flagellar basal-body/hook protein, C-terminal domain

phrase: GLDAQQINMNVIANNLANVN
type: CONSERVED_SITE
name: Flagellar_basal_body_rod_CS
description: Flagellar basal body rod protein, conserved site

phrase: AINGNGFFQVQLPDGNAAYTRDGSFQINPNGQLVTNNGFLIQPVINFPANGNNMSVSRDGIIT
type: DOMAIN
name: LlgE_F_G-like_D1
description: Flagellar hook protein FlgE/F/G-like, D1 domain

phrase: IAKTGLDAQQINMNVIANNLANVNTNGF
type: DOMAIN
name: Flag_bb_rod_N
description: Flagellar basal body rod protein, N-terminal
Protein sequence:
MSAKEVRFGEDARNKMLKGVNILADAVKVTLGPKGRNVILDKSFGTPTVTKDGVSVAKEIELADKFENMGAQLVKEVASQTNDAAGDGTTTATVLAQAIVVEGLKAVAAGMNPMDLKRGIDKAVAEAVKTLHAISKPCSDSKAIAQVGTISANSDETVGAKIAEAMEKVGKEGVITVEEGQGLEDSLEVVEGMQFDRGYLSPYFINNQQSQQVELENPYILLHDKKIANIRDMLPLLEGVAKSGQPLLIVAEDVEGEALATLVINSMRGIVKVAAVKAPGFGDRRKAMLEDIAILTGGTVISEEVGLTLESVTLDQLGTAKRVTVGKDNTTIIDGSGEKSAIEARVALIRHQIEESSSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGIVPGGGVALIRAINSIVDLKGDNYDQQVGIDIARRAMEYPLRTIVSNAGSEAAVVLERVKSGKGNDGYDAATGQYVDMVAAGIIDPTKVTRSALQNAASVAGLMITTEAMVSEIPQKEEGHHHDMGGMGGMGGMGMM

Annotated regions:
phrase: AAVEEGIVPGG
type: CONSERVED_SITE
name: Chaperonin_Cpn60_CS
description: Chaperonin Cpn60, conserved site
Protein sequence:
MKVLRGSAVLSSATLTLQSAPTAVADNNRLRLFSGSANVPFSQEVARYLGMELGPMIRKRFADGELYIQIQESIRGCDVYLIQPTCHPVNDNLMELLIMIDACRRASARQITAVIPYYGYARADRKTAGRESITAKLVANLITQAGANRIVAMDLHSAQIQGYFDIPFDHVYGSPVLINYLASKQLADLVVVSPDVGGVARARAFAKKLDDAPLAIIDKRRQAHNVAEVLNVIGDVEGKTAVLVDDMIDTGGTITEGAKLLREQGARQVYACATHAVFSPPAIERLSSGIFEEVIVTNTIPVPEDHRFAQLTVLSVANLIGETIWRVHEDSSVSSMFR

Annotated regions:
phrase: RLFSGSANVPFSQEVARYLGMELGPMIRKRFADGELYIQIQESIRGCDVYLIQPTCHPVNDNLMELLIMIDACRRASARQITAVIPYYGYARADRKTAGRESITAKLVANLITQA
type: DOMAIN
name: Pribosyltran_N
description: Ribose-phosphate pyrophosphokinase, N-terminal domain

phrase: DLHSAQIQGYFDIPF
type: CONSERVED_SITE
name: PRib_PP_synth_CS
description: Phosphoribosyl pyrophosphate synthetase, conserved site

phrase: SPVLINYLASKQLADLVVVSPDVGGVARARAFAKKLDDAPLAIIDKRRQAHNVAEVLNVIGDVEGKTAVLVDDMIDTGGTITEGAKLLREQGARQVYACATHAVFSPPAIERLSSGIFEEVIVTN
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain
Protein sequence:
MNDITVTLPDGSELSVPADATVEDVAYEIGPGLGRDTIAGVVDGELVDATTSVYNDARVVIVTEQSDEYQRVLRHSAAHVFAQALQREYPDAKLTIGPPTDDGFYYDIASVDLDENDLETIETEMEAIIDADIPITQQYQSREEAFSKYENNPYKCDILETEAADEDPVSFYIQDDFEDLCQGPHVDSTGEIGAITLLNISSAYWRGDEDNDTLTRVYGAAFESESELESFLERRKKAKERDHRKIGQELDLFSIPDITGPGLPLYHPDGKKILNELSSFARSLNLEAGYEPVETPHLFRTELWKQSGHYENYVDDMFLLDVSDEEYGLKPMNCPGHATIFDQHSWSYRDLPVRYFEDGKVYRKEQRGELSGLSRVWSFTIDDGHLFCQPEQIEQEVTHVMDAIYSVLDTFGLEAHVALATRPEKSVGGDEIWENAETQLRSVLESQNIDYDLEPGDGAFYGPKIDFAFEDALGRQWDGPTVQLDFNMPDRFELTYTGEDNTDHQPVMIHRALYGSYERFFMVLIEHFNGKFPLWLAPDQVRILPISDDQLGYAHRIKNELSDFRVSIEDRAWTLGRKIRAAQEERVPYMIIIGDDEVSTETISVRDRKEREKQDVDLSTFHSHLKSEYENKRLEPDFIDMN

Annotated regions:
phrase: PDQVRILPISDDQLGYAHRIKNELSDFRVSIEDRAWTLGRKIRAAQEERVPYMIIIGDDEVSTETISVRDRKEREKQDVDLSTFHSHL
type: DOMAIN
name: ThrRS_anticodon
description: Threonine-tRNA ligase, class IIa, anticodon-binding domain

phrase: SDEEYGLKPMNCPGHATIFDQHSWSYRDLPVRYFEDGKVYRKEQRGELSGLSRVWSFTIDDGHLFCQPEQIEQEVTHVMDAIYSVLDTFGLEAHVALATRPEKSVGGDEIWENAETQLRSVLESQNIDYDLEPGDGAFYGPKIDFAFEDALGRQWDGPTVQLDFNMPDRFELTYTGEDNTDHQPVMIHRALYGSYERFFMVLIEH
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: QVRILPISDDQLGYAHRIKNELSDFRVSIEDRAWTLGRKIRAAQEERVPYMIIIGDDEVSTETISVRDRKEREKQDVDLSTFHSHLK
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: ITVTLPDGSELSVPADATVEDVAYEIGPGLGRDTIAGVVDGELVDATTSVYNDARVVIV
type: DOMAIN
name: TGS
description: TGS

phrase: YHPDGKKILNELSSFARSLNLEAGYEPVETPHLFRTELWKQSGHYENYVDDMFLLDVSDEEYGLKPMNCPGHATIFDQHSWSYRDLPVRYFEDGKVYRKEQRGELSGLSRVWSFTIDDGHLFCQPEQIEQEVTHVMDAIYSVLDTFGLEAHVALATRPEKSVGGDEIWENAETQLRSVLESQNIDYDLEPGDGAFYGPKIDFAFEDALGRQWDGPTVQLDFNMPDRFELTYTGEDNTDHQPVMIHRALYGSYERFFMVLIEHFNGKFPLWLAPDQVRIL
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: VSFYIQDDFEDLCQGPHVDSTGEIGAITLLNISSAYWRGDEDNDTLTRV
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD

phrase: DHRKIGQELDLFSIPDITGPGLPLYHPDGKKILNELSSFARSLNLEAGYEPVETPHLFRTELWKQSGHYENYVDDMFLLDVSDEEYGLKPMNCPGHATIFDQHSWSYRDLPVRYFEDGKVYRKEQRGELSGLSRVWSFTIDDGHLFCQPEQIEQEVTHVMDAIYSVLDTFGLEAHVALATRPEKSVGGDEIWENAETQLRSVLESQNIDYDLEPGDGAFYGPKIDFAFEDALGRQWDGPTVQLDFNMPDRFELTYTGEDNTDHQPVMIHRALYGSYERFFMVLIEHFNGKFPLWLA
type: DOMAIN
name: ThrRS_core
description: Threonine-tRNA ligase catalytic core domain

phrase: VSFYIQDDFEDLCQGPHVDSTGEIGAITLLNISSAYWRGDEDNDTLTRV
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD

phrase: MNDITVTLPDGSELSVPADATVEDVAYEIGPGLGRDTIAGVVDGELVDATTSVYNDARVVIV
type: DOMAIN
name: TGS
description: TGS
Protein sequence:
MSDRLTLLRPDDWHIHLRDGAALANTVGDAARTFGRAIVMPNLVPPVRNAAEADAYRQRILAARPAASRFEPLMVLYLTDRTSAEEIRTAKASGFVHAAKLYPAGATTNSDSGVTRIDNVFAALEAMAEVGMPLLVHGEVTRAEVDVFDREKQFIDEHLRRVVERFPTLKVVFEHITTGDAAQFVREAPANVGATITAHHLLYNRNHMLVGGIRPHFYCLPILKRNTHQEALLDAAVSGNPKFFLGTDSAPHARHAKEAACGCAGCYTAYAAIELYAEAFEQRNALDKLEGFASLHGPDFYGLPRNTDRITLVREQWQAPASLPFGDFDVVPLRAGETLRWKLLEAEA

Annotated regions:
phrase: GTDSAPHARHA
type: CONSERVED_SITE
name: Dihydroorotase_CS
description: Dihydroorotase, conserved site

phrase: DWHIHLRD
type: CONSERVED_SITE
name: Dihydroorotase_CS
description: Dihydroorotase, conserved site

phrase: DWHIHLRDGAALANTVGDAARTFGRAIVMPNLVPPVRNAAEADAYRQRILAARPAASRFEPLMVLYLTDRTSAEEIRTAKASGFVHAAKLYPAGATTNSDSGVTRIDNVFAALEAMAEVGMPLLVHGEVTRAEVDVFDREKQFIDEHLRRVVERFPTLKVVFEHITTGDAAQFVREAPANVGATITAHHLLYNRNHMLVGGIRPHFYCLPILKRNTHQEALLDAAVSGNPKFFLGTDSAPHARHAKEAACGCAGCYTAYAAIELYAEAFEQRNALDKLEGFASLHGPDFYGLPRNTDR
type: DOMAIN
name: Amidohydro-rel
description: Amidohydrolase-related
Protein sequence:
MLEHGVMKIPGINNVGKTGQAGGETERIPSTEPLGSSAATSPAGPLGGLPARSSSISNTNRTGENPMITPIISSNLGLKHRVTLRKATLASLMQSLSGESSNRVMWNDRYDTLLIARDPREIKNAIEKSVTDFGGLENYKELTGGADPFALMTPVCGLSANNIFKLMTEKDVPIDPTSIEYLENTSFAEHVNTLDSHKNYVVIVNDGRLGHKFLIDLPALTQGPRTAYIIQSDLGGGALPAVRVEDWISRRGSDPVSLDELNQLLSKDFSKMPDDVQTRLLASILQIDKDPHKVDIKKLHLDGKLRFASHEYDFRQFQRNAQYVAGLG

Annotated regions:
Protein sequence:
SGGFDFSFLPQPPQEKAHDGGRYYLGPGPMGLMGPRGPPGASGAPGPQGFGPAGEPGEPGQTGPAGARGPAGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGRGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGELGPVGNTGPSGPAGPRGEQGLPGVSGPVGPPGNPGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGPVGASGATGARGLVGEPGPAGSKGESGGKGEPGSAGPQGPPGSSGEEGKRGPSGESGSTGPTGPPGLRGGPGSRGLPGADGRAGVIGPAGARGASGPAGVRGPSGDTGRPGEPGLMGARGLPGSPGNVGPAGKEGPAGLPGIDGRPGPIGPAGARGEAGNIGFPGPKGPAGDPGKAGEKGHAGLAGNRGAGAQGPPGLQGVQGGKGEQGPAGPPGFQGLPGPAGTTGEVGKPGERGIPGEFGLPGPAGPRGERGPSGESGAVGPSGAIGSRGPSGPPGPDGNKGEPGVVGAPGTAGPAGSGGLPGERGAAGIPGGKGEKGETGLRGEVGTTGRDGARGAPGAVGAPGPAGATGDRGEAGAAGPAGPAGPRGSPGERGEVGPAGPNGFAGPAGAAGQPGAKGERGTKGPKGENGIVGPTGPVGSAGPAGPNGPAGPAGSRGDGGPPGVTGFPGAAGRTGPPGPSGITGPPGPPGAAGKEGLRGPRGDQGPVGRGETGAGGPPGFTGEKGPSGEPGTAGPPGTAGPQGLLGAPGILGLPGSRGERGLPGVAGAVGEPGPLGIGPPGARGPSGGVPGVNGAPGEAGRDGNPGSDGPPGRDGLPGHKGERGYAGNPGPVGAAGAPGPQGVGPVGKHGNRGEPGPVGSAGPVGALGPRGPSGPQGIRGDKGEAGDKGPRGLPGLKGHNGLQGLPGLAGQHGDQGPGPVGPAGPRGPAGPSGPPGKDGRTGHPGAVGPAGIRGSQGSQGPSGPAGPPGPPGPPGASGGGYDFGYEGDFYRA

Annotated regions:
phrase: GVIGPAGARGASGPAGVRGPSGDTGRPGEPGLMGARGLPGSPGNVGPA
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: GPVGPAGPRGPAGPSGPPGKDGRTGHPGAVGPAGIRGSQGSQGPSGPAGPPGPPGPPG
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: GKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAPGVKGEPGAPG
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: GLPGPAGPRGERGPSGESGAVGPSGAIGSRGPSGPPGPDGNKGEPGVVGAPGTAGPA
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: GPAGKEGPAGLPGIDGRPGPIGPAGARGEAGNIGFPGPKGPAGDPGKAGEKGHAGLAG
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: AGAQGPPGLQGVQGGKGEQGPAGPPGFQGLPGPAGTTGEVGKPGERGIPGEFGLP
type: REPEAT
name: Collagen
description: Collagen triple helix repeat
Protein sequence:
MAVDLLLGLQWGDEGKGKIVDVLTSKYDIIARFQGGPNAGHTLEFDGQKHVLHTIPSGIFHDDSINLVGNGVVIDPVIFKRELDNLAKHKIDYKSKLVISRKAHLILPTHRLLDAASEASKGKAKIGSTLKGIGPTYMDKTGRNGLRVGDLELEDWKDRYRALADKHEKMIAFYDVDVQYDLKELEKEFCTAVDTLKELTFIDSEEYLHQAMKSGKSILAEGAQGSLLDIDFGTYPFVTSSNTTAAGACTGLGVAPREIGEAFGIFKAYTTRVGSGPFPTELFDEVGERMGKVGNEFGATTGRKRRCGWLDLVALKYAVQVNGITQLIMMKGDVLSGFDTLKVCTAYKYKGKEITHLPFNIESGNIEPVYTEVKGWEEDLTKMTDASSLPKEFNEYVDFLEKELETPITIVSVGPDRKQTITR

Annotated regions:
phrase: QWGDEGK
type: BINDING_SITE
name: Adenylosuccin_syn_GTP-bd
description: Adenylosuccinate synthase, GTP-binding site

phrase: GIGPTYMDKTG
type: ACTIVE_SITE
name: Adenylosuccin_syn_Lys_AS
description: Adenylosuccinate synthase, active site
Protein sequence:
MFTIGAHLSISKGFENLGLEALSIDANTAQFFPRSPRGGKAKPLNQADVDGLQELMDNTTMDVILAHAPYIINLASKSEKTRNNAYEIFEDDLKRLDNLPNNMYNFHPGSHVQQGVEKGIELISDSLNKLIREDMKTTILLETMAGKGTEIGRTFEELESIIEKIDMDEKVGVCIDTCHIYDGGYDIVNDLDGVIDEFDSIIGLDRLKAIHLNDSKYGLNSHKDRHEKIGMGKIGIDAITEIINHKKLRDLPFYLETPNDVEGYKEEIDLLRGLYK

Annotated regions:
phrase: HAPYIINL
type: BINDING_SITE
name: AP_endonuc_F2_Zn_BS
description: AP endonuclease 2, zinc binding site

phrase: GVCIDTC
type: BINDING_SITE
name: AP_endonuc_F2_Zn_BS
description: AP endonuclease 2, zinc binding site

phrase: IHLNDSKYGLNSHKDR
type: BINDING_SITE
name: AP_endonuc_F2_Zn_BS
description: AP endonuclease 2, zinc binding site

phrase: ALSIDANTAQFFPRSPRGGKAKPLNQADVDGLQELMDNTTMDVILAHAPYIINLASKSEKTRNNAYEIFEDDLKRLDNLPNNMYNFHPGSHVQQGVEKGIELISDSLNKLIREDMKTTILLETMAGKGTEIGRTFEELESIIEKIDMDEKVGVCIDTCHIYDGGYDIVNDLDGVIDEFDSIIGLDRLKAIHLNDSKYGLNSHKDRHEKIGMGKIGIDAITEIINHKKLRDLPFYLETPNDVEGYKEEIDLL
type: DOMAIN
name: Xyl_isomerase-like_TIM-brl
description: Xylose isomerase-like, TIM barrel domain
Protein sequence:
MRIGQGVDVHAFGDGDKIVIGGVVIPYERGLVAHSDGDVLLHALCDALLGAAALGDIGKHFPDTDSAYKNACSRTLLRMVYSKLKAKGYSLVNADMTIVAQAPKMAPHISDMRAKIAEDLDTHIDNINVKATTTEQLGFNGRKEGITALATVLIK

Annotated regions:
phrase: MRIGQGVDVHAFGDGDKIVIGGVVIPYERGLVAHSDGDVLLHALCDALLGAAALGDIGKHFPDTDSAYKNACSRTLLRMVYSKLKAKGYSLVNADMTIVAQAPKMAPHISDMRAKIAEDLDTHIDNINVKATTTEQLGFNGRKEGITALATVLI
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RIGQGVDVHAFGDGDKIVIGGVVIPYERGLVAHSDGDVLLHALCDALLGAAALGDIGKHFPDTDSAYKNACSRTLLRMVYSKLKAKGYSLVNADMTIVAQAPKMAPHISDMRAKIAEDLDTHIDNINVKATTTEQLGFNGRKEGITALATVL
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: MRIGQGVDVHAFGDGDKIVIGGVVIPYERGLVAHSDGDVLLHALCDALLGAAALGDIGKHFPDTDSAYKNACSRTLLRMVYSKLKAKGYSLVNADMTIVAQAPKMAPHISDMRAKIAEDLDTHIDNINVKATTTEQLGFNGRKEGITALATVL
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: MRIGQGVDVHAFGDGDKIVIGGVVIPYERGLVAHSDGDVLLHALCDALLGAAALGDIGKHFPDTDSAYKNACSRTLLRMVYSKLKAKGYSLVNADMTIVAQAPKMAPHISDMRAKIAEDLDTHIDNINVKATTTEQLGFNGRKEGITALATVL
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RIGQGVDVHAFGDGDKIVIGGVVIPYERGLVAHSDGDVLLHALCDALLGAAALGDIGKHFPDTDSAYKNACSRTLLRMVYSKLKAKGYSLVNADMTIVAQAPKMAPHISDMRAKIAEDLDTHIDNINVKATTTEQLGFNGRKEGITALATVL
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: SDGDVLLHALCDALL
type: CONSERVED_SITE
name: MECDP_synthase_CS
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site
Protein sequence:
MEASVILPILKKKLAFLSGGKDRRSGLILTIPLCLEQTSMDELSVTLDYLLSIPSEKCKARGFTVIVDGRKSQWNVVKTVVLMLQNVVPAEVSLVCVVKPDEFWDKKVTHFCFWKEKDRLGFEVILVSANKLTRYIEPCQLTEDFGGSLTYDHMDWLNKRLVFEKFTKESTSLLDELALINNGSDKGNEQEKERSVDLNFLPSVDPETVLQTGHELLSELQQRRFNGSDGGVSWSPMDDELLAQPQVMKLLDSLREQYTRYQEVCRQRSKRTQLEEIQQKVMQVVNWLEGPGSEQLRAQWGIGDSIRASQALQQKHEEIESQHSEWFAVYVELNQQIAALLNAGDEEDLVELKSLQQQLSDVCYRQASQLEFRQNLLQAALEFHGVAQDLSQQLDGLLGMLCVDVAPADGASIQQTLKLLEEKLKSVDVGLQGLREKGQGLLDQISNQASWAYGKDVTIENKENVDHIQGVMEDMQLRKQRCEDMVDVRRLKMLQMVQLFKCEEDASQAVEWLSELLDALLKTHIRLGDDAQETKVLLEKHRKFVDVAQSTYDYGRQLLQATVVLCQSLRCTSRSSGDTLPRLNRVWKQFTVASEERVHRLEMAIAFHSNAEKILQDCPEEPEAMNDEEQFEEIEAIGKSLLDRLTIPVVYPDGTEQYFGSPSDMASTAEHIRDRMKLVSLKRQQLRHPELVTTES

Annotated regions:
phrase: QAALEFHGVAQDLSQQLDGLLGMLCVDVAPADGASIQQTLKLLEEKLKSVDVGLQGLREKGQGLLDQISNQASWAYGKDVTIENKENVDHIQGVMEDMQLRKQRCEDMV
type: DOMAIN
name: Spectrin_SESTD1
description: SESTD1-like, spectrin repeats region

phrase: MEASVILPILKKKLAFLSGGKDRRSGLILTIPLCLEQTSMDELSVTLDYLLSIPSEKCKARGFTVIVDGRKSQWNVVKTVVLMLQNVVPAEVSLVCVVKPDEFWDKKVTHFCFWKEKDRLGFEVILVSANKLTRYIEPCQLTEDFGGSLTYD
type: DOMAIN
name: CRAL-TRIO_dom
description: CRAL-TRIO lipid binding domain

phrase: TIPLCLEQTSMDELSVTLDYLLSIPSEKCKARGFTVIVDGRKSQWNVVKTVVLMLQNVVPAEVSLVCVVKPDEFWDKKVTHFCFWKEKDRLGFEVILVSANKLTRYIEPCQLTEDFGGSLTYD
type: DOMAIN
name: CRAL-TRIO_dom
description: CRAL-TRIO lipid binding domain
Protein sequence:
MAKQIKGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDSDGYESVQIAFGEIDPRKVNKPLKGHFAKADVTPRRHLVEIRTADASEYTLGQEITAETFEAGVKVDVTGKSKGKGFAGVMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAVDAEKGLLLIKGAVPGPNGGLVLVRTAAKGA

Annotated regions:
phrase: FEAGVKVDVTGKSKGKGFAGVMK
type: CONSERVED_SITE
name: Ribosomal_uL3_CS
description: Large ribosomal subunit protein uL3, conserved site
Protein sequence:
MTLNLDEAKITAEVLTTALPYIQRFVDKIIVVKYGGNAMTDPALESSFARDIVLLKTVGMHPVVVHGGGPQVDNLLKELGRHSDRIDGMRVTDKDTMDIVEMVLGGNVNKSIVSLINKHGGCAIGLTGKDANLILAKKLMMEKIGVDGVAVPVDLGFVGDVVSVNKDVINMLIASDFIPVIAPLGVDEEGNTYNINADLVAGKVAEFLQAEKLMLLTNIKGVLGRDGEVVTGLTPKTVDSLIEDGTISGGMIPKIQCALDAVRSGVKSAVIVDGRVPHATLLEIFTNEGVGTLISRDLG

Annotated regions:
phrase: KIIVVKYGGNAMTDPALESSFARDIVLLKTVGMHPVVVHGGGPQVDNLLKELGRHSDRIDGMRVTDKDTMDIVEMVLGGNVNKSIVSLINKHGGCAIGLTGKDANLILAKKLMMEKIGVDGVAVPVDLGFVGDVVSVNKDVINMLIASDFIPVIAPLGVDEEGNTYNINADLVAGKVAEFLQAEKLMLLTNIKGVLGRDGEVVTGLTPKTVDSLIEDGTISGGMIPKIQCALDAVRSGVKSAVIV
type: DOMAIN
name: Asp/Glu/Uridylate_kinase
description: Aspartate/glutamate/uridylate kinase
Protein sequence:
MSKLKEKRGKIVVSMERVKKEEAIELARVQIEKTFGKGSLIKIGESSVGKGIKSISSGSIVLDEALGIGGYPRGRIIEIFGPESSGKTTLTLQAIAEVQKEGGIAAFIDAEHALNPVYAKALGVNVSELWLSQPDTGEQALEIAEHLIRSGGIDLIVVDSVAALTPKLEIDGEMGDSQIGLQARLMSKSLRKITGILSKSNTCIMFINQIRMRIGIMFGNPETTAGGNALKFYSSLRLEVRKIEQITRSGSSDDVIGNKIRVKIVKNKVAPPFRKVELVIYFGKGISREAGILDAALKHNLIQKTGSWYSLGNNKLGQGRESVVEYLNKEVELANDLDKRLRKIIFNNFDQEDVNFIKLKED

Annotated regions:
phrase: ILDAALKHNLIQKTGSWYSLGNNKLGQGRESVVEYLNKEVELANDLDKRLR
type: DOMAIN
name: RecA-like_C
description: RecA-like, C-terminal

phrase: GIMFGNPETTAGGNALKFYSSLRLEVRKIEQITRSGSSDDVIGNKIRVKIVKNKVAPPFRKVELVIYFGKGISREA
type: DOMAIN
name: RecA_monomer-monomer_interface
description: DNA recombination and repair protein RecA, monomer-monomer interface

phrase: GIKSISSGSIVLDEALGIGGYPRGRIIEIFGPESSGKTTLTLQAIAEVQKEGGIAAFIDAEHALNPVYAKALGVNVSELWLSQPDTGEQALEIAEHLIRSGGIDLIVVDSVAALTPKLEIDGEMGDSQIGLQARLMSKSLRKITGILSKSNTCIMFINQ
type: DOMAIN
name: RecA_ATP-bd
description: DNA recombination and repair protein RecA-like, ATP-binding domain

phrase: RGRIIEIFGPESSGKTTLTLQAIAEVQKEGGIAAFIDAEHALNPVYAKALGVNVSELWLSQPDTGEQALEIAEHLIRSGGIDLIVVDSVAALTPKLEIDGEMGDSQIGLQARLMSKSLRKITGILSKSNTCIMFINQIRMRIGIMFGNPETTAGGNALKFYSSLRLEVRKI
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: AIELARVQIEKTFGKGSLIKIGESSVGKGIKSISSGSIVLDEALGIGGYPRGRIIEIFGPESSGKTTLTLQAIAEVQKEGGIAAFIDAEHALNPVYAKALGVNVSELWLSQPDTGEQALEIAEHLIRSGGIDLIVVDSVAALTPKLEIDGEMGDSQIGLQARLMSKSLRKITGILSKSNTCIMFINQIRMRIGIMFGNPETTAGGNALKFYSSLRLEVRKIEQITRSGSSDDVIGNKIRVKIVKNKVAPPFRKVELVIYFGKGI
type: DOMAIN
name: RecA-like_N
description: RecA-like, N-terminal

phrase: ALKFYSSL
type: CONSERVED_SITE
name: DNA_recomb/repair_RecA_CS
description: DNA recombination/repair protein RecA, conserved site
Protein sequence:
MKDIGEQLYTTQVNGGPSSLTMSPKQPNRATRTERQEAQTLLYQGSEAEAATMTIATCVQCKSVHKIPTQDLRKGPGQSQDTYVCFKCSLRAVPTQLHFVNNNAGAAHVRNETETISSPVNKFKVRNFKPGKYYCDKCRFSTKDPLQYRKHTLQHEEIRFICSHCSYISYTKGEFQRHLVKHTGIFPYRCEYCDYGAIRNDYIVKHRRRVHERAGAKRPFKTVAKLEPKRTSIPKQSMELSKGPSPRAAFQNKLSDQLSRFSLHANKDKTHNLMLLPELKKYQKDVVCIPNKVTLSEPREVSLLGNKNVEVEVLSPSKEPVHPGMPLTVMAPSELVVPTNCLAQLMDVKVVNGAQQLVLKLFPLEENARLETSRGDGGTSECLSTEKGSGGQKKMLSPEASRSLAVEGNAGDFVGLDRLHSLVQKQLKNVKWVKSCNFFMPNSGVHSQQESFLGSDTIKELQKSHSLCPPRALPSAAIKSHSPASVQNSVPYGPGATVSHFLSKAAVAFADDRRGARSNSQQLLPLASLPSKVPFSGEKGLLPIGESDLEARNRISRPETLVSSDRKLEDKQMESKAVGNTGQVSSVQNKEYLHINITGEDKPRSQQPGDQPGQPKTSETAGATFEGPIISSVFSLSSGSENVPEAIKWNSSTTKIKSIELLRRKIAQLIESCGKPSSLSANSAQRRSIGQAPKLTSKATPKAIQEMSVSLTGPGPTPGPSVGPLQKPPNEDSITGSRQLVPQQVCPQFISANDGKMENRVTRKTPVA

Annotated regions:
phrase: FICSHCSYISYTKGEFQRHLVK
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: YRCEYCDYGAIRNDYIVKHRRRV
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: YYCDKCRFSTKDPLQYRKHTLQ
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: YRCEYCDYGAIRNDYIVKHRRRVHERAG
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: FICSHCSYISYTKGEFQRHLVKHTGIF
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type
Protein sequence:
MMTNFKFALKNLKVNFTSENIDKLRFYIEKVLLFSDRFNLVSNNVRNFDAMLLHALDSVSGLPIVKDKNPRQVLDVGSGAGFPGIVLALFDRCRKYVLLERSNKKAIFLKMISLELGLENVEVLEHNVEEEQNKYEFITIRAFGDIRKYANILGSILKSGGLIMAYKGKFDKVEFEMSYVKNLFDKVEIKSSELISDKERYFLLLYDYKC

Annotated regions:
Protein sequence:
MSSDGTVVKSLRDLGLTARGGRDVKVTDLAVDSRDVREGYLFAALPGTRVHGAEFIQYALRMGAGAVLTDAAGAKIAADVLGGADAALIVAEDPRQALAYTSALWFGAQPETMVAVTGTNGKTSVATFTRQIWQELGLRAVNLGTTGVEGDWTAPLKHTTPEPITLHRMLAGAAESGVTHAAMEASSHGLSQRRLDGVQLMAAGFTNFTQDHLDYHASFEDYFAAKAGLFARVLPEDGVAVINIDDPRGVDMVAIARARGQEVLTVGREAADICLEAQRFDATGQEIRLSFEGEVRQERLGLIGGFQADNVLLAAGLVIACGGDPDDVFDVLPMLGTVRGRMQLAAMRDNGAAVFVDYAHTPDAVATAIKALRPHVMGRLVAIVGAGGDRDKGKRLLMGQAAAEFADSVIVTDDNPRSEDPASIRAMVMEGAPEALEVGDRAEAILRGVDALGPGDALLICGKGHESGQIVGDTVFPFDDAEQASVAVSALDGKGL

Annotated regions:
phrase: GRMQLAAMRDNGAAVFVDYAHTPDAVATAIKALRPHVMGRLVAIVGAGGDRDKGKRLLMGQAAAEFADSVIVTDDNPRSEDPASIRAMVMEGAPEALEVGDRAEAILRGVDALGPGDALLICGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: TDLAVDSRDVREGYLFAALPGTRVHGAEFIQYALRMGAGAVLTDAAGAKIAADVLGGADAALIVAEDPRQALA
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: VTGTNGKTSVATFTRQIWQELGLRAVNLGTTGVEGDWTAPLKHTTPEPITLHRMLAGAAESGVTHAAMEASSHGLSQRRLDGVQLMAAGFTNFTQDHLDYHASFEDYFAAKAGLFARVLPEDGVAVINIDDPRGVDMVAIARARGQEVLTVGREAADICLEAQRFDATGQEIRLSFEGEVRQERLGLIGGFQADNVLLAAG
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central