nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MDPDAFTASLFKWDPRTVLSTAPSPRPQLLDYAVTPTTAPMTYHPARLPRELGGLEELFQAYGIRYYTAAKIAELGFTVSTLVDMKDDELDDMMNSLSQIFRWDLLVGERYGIKAAIRAERRRLDEEEIKRRGLLSGDTTNALDALSQEGLSEEPVVQREKEAMGSGGGSTWEVAVVEERRKRQQIRRRRMKMKGNDHGENEEGEEEEEDNISGGGVGGGERQREHPFIVTEPAEVARGKKNGLDYLFHLYEQCREFLIQVQAIAKERGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEVSNELRRGFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPRLSIWYGPTKLRQLCHAERNGAAASSSVSFGTTHLPF

Annotated regions:
phrase: GGVGGGERQREHPFIVTEPAEVARGKKNGLDYLFHLYEQCREFLIQVQAIAKERGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEVSNELRRGFKERGENVGAWRQACYKPLVAIAARQGWDIDAIFNAHPRLSIWYGPTKLRQLCHAERNGA
type: DOMAIN
name: FLO/LFY_C
description: Floricaula/leafy, DNA-binding C-terminal domain

phrase: RELGGLEELFQAYGIRYYTAAKIAELGFTVSTLVDMKDDELDDMMNSLSQIFRWDLLVGERYGIKAAIRAERRRLDEE
type: DOMAIN
name: LFY_SAM
description: Floricaula/Leafy protein, SAM domain
Protein sequence:
MSSTKQWDISKALAVATLFHFFHNVGKFCLMPFLTLYFRQLGLGASLVGIIIGFKHAVHLLWAPLCSFLAKSHRKRRFFIMASLLLSAGAGGLFAFYPPLDKNIVSLFCNTSMPWKEQLNPPIDISVFVDENISTTYATPTNHQTTNGEFNTFPSSVAEVAIDTTMASSLDMKTTTHQRFTDQFPSSSPLTRNKRLEHQTRKVLGSGKAQKANSSKSSASNSKQRSSLNNQTAPFATHPNVSHRPSIHERKVRDISIDFTDSFLDPKHKIFLIVLAMVIIWEILAAPLEWIADDSLYEYLDFVDATDRHGKLWIWGYLGASMGSIFITFLIDNLNCFVIFDIPRVSFHFFCYGGFLISTFFLSTLYPVHVSKKTEHSNKTVKALGFLGSDGRIVLTALTVFVLGAVGSTIQNFLFWQMQDIGSNELYMGLSIAAGLLSELALYFFRNKLLKTLTFKWMVVLGLLSLGIQFLYYSFLWTPWSVVAIQILNAFSSGVIWWAINSQVVDVASPGTERSLQLTLRWLAYGCGSSAGSFASGFIISRFSLAVLYQACCITLLTWIVIFLLVQPKLPNIKKINYSRLLAADNSDMSDSDEEQDRDWLVTAMKDENSNRKW

Annotated regions:
phrase: TLFHFFHNVGKFCLMPFLTLYFRQLGLGASLVGIIIGFKHAVHLLWAPLCSFLAKSHRKRRFFIMASLLLSAGAGGLFAFYPPLDKNIVSLFCNTSMPWKEQLNPPIDISVFVDENISTTYATPTNHQTTNGEFNTFPSSVAEVAIDTTMASSLDMKTTTHQRFTDQFPSSSPLTRNKRLEHQTRKVLGSGKAQKANSSKSSASNSKQRSSLNNQTAPFATHPNVSHRPSIHERKVRDISIDFTDSFLDPKHKIFLIVLAMVIIWEILAAPLEWIADDSLYEYLDFVDATDRHGKLWIWGYLGASMGSIFITFLIDNLNCFVIFDIPRVSFHFFCYGGFLISTFFLSTLYPVHVSKKTEHSNKTVKALGFLGSDGRIVLTALTVFVLGAVGSTIQNFLFWQMQDIGSNELYMGLSIAAGLLSELALYFFRNKLLKTLTFKWMVVLGLLSLGIQFLYYSFLWTPWSVVAIQILNAFSSGVIWWAINSQVVDVASPGTERSLQLTLRWLAYGCGSSAGSFASGFIISRFSLAVLYQ
type: DOMAIN
name: MFS_assoc_dom
description: Major facilitator superfamily associated domain
Protein sequence:
MLDMNPQETYTAPEEVNTPSRPIDENALLQRHQVMVKRVVNQLRVHATSHCSIEDMQQIGLIALVEAGRRYGDIDDTHFPAFAVCRVRGAILDELRRLDWRSRKTRQQAHELNDVTRDLTRSLGRMPTDSEIIKALGTDEQDYYNRQNAALAGEMQSLDQLMENSTDSHFGGQYDGMEHEHIRRSLDSALGRLSKRDQLLLTLFYQHELNLHEIALVLDLTPPRICQLHKQALKQLNQLMSS

Annotated regions:
phrase: NLHEIALVLDLTPPRICQLHKQALKQ
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: NALLQRHQVMVKRVVNQLRVHATSHCSIEDMQQIGLIALVEAGRRYGDIDDTHFPAFAVCRVRGAILDELRRLDWRSRKTRQQAHELNDVTRDLTRSLGRMPTDSEIIKALGTDEQDYYNRQNAALAGEMQSLDQLMENSTDSHFGGQYDGMEHEHIRRSLDSALGRLSKRDQLLLTLFYQHELNLHEIALVLDLTPPRICQLHKQALKQLNQ
type: DOMAIN
name: RNA_pol_sigma-70_dom
description: RNA polymerase sigma-70-like domain

phrase: ALGRLSKRDQLLLTLFYQHELNLHEIALVLDLTPPRICQLHKQALKQ
type: DOMAIN
name: RNA_pol_sigma70_r4
description: RNA polymerase sigma-70 region 4

phrase: LLQRHQVMVKRVVNQLRVHATSHCSIEDMQQIGLIALVEAGRRYGDIDDTHFPAFAVCRVRGAILDELRRLDW
type: DOMAIN
name: RNA_pol_sigma70_r2
description: RNA polymerase sigma-70 region 2
Protein sequence:
MKPLHYTASALALGLALMGNAQAVTTIPFWHSMEGELGKEVDSLAQRFNAENPDYKIVPTYKGNYEQNLSAGIAAFRTGNAPAILQVYEVGTATMMASKAIQPVYDVFKEAGIQFDESQFVPTVSGYYSDSKTGHLLSQPFNSSTPVLYYNKDAFKKAGLDPEQPPKTWQDLADYAAKLKASGMKCGYASGWQGRIQLENFSAWNGLPFASKNNGFDGTDAVLEFNKPEQVKHIAMLEEMNKKGDFSYVGRKDESTEKFYNGDCAMTTASSGSLANIREYAKFNYGVGMMPYDADAKDAPQNAIIGGASLWVMQGKDKETYTGVAKFLDFLAKPENAAEWHQKTGYLPITKAAYDLTREQGFYEKNPGADTATRQMLNKPPLPFTKGLRLGNMPQIRVIVDEELESVWTGKKTPQQALDTAVERGNQLLRRFEKSTKS

Annotated regions:
phrase: PFNSSTPVLYYNKDAFK
type: CONSERVED_SITE
name: SBP_1_CS
description: Solute-binding family 1, conserved site
Protein sequence:
MTSPSPTARRTRLRRRTALALAAAATAALTLSACGTDTKANTPATRAGSGNAAAAKADTVALLDDTTLAVPGDKPSALFFFSVGCGECAGGAKSLDKAAQAFDKAGKKANFLAVDMDPNESKQTIMQFLDYIKAPALPATIDKGAALSQRYQVAALSTLIVVAPQGKVTYRATDPSADQIQDALKKAGA

Annotated regions:
phrase: KPSALFFFSVGCGECAGGAKSLDKAAQAFDKAGKKANFLAVDMDPNESKQTIMQFLDYIKAPALPATIDKGAALSQRYQVAALSTLIVVAPQGK
type: DOMAIN
name: Thioredoxin-like_fold
description: Thioredoxin-like fold

phrase: TKANTPATRAGSGNAAAAKADTVALLDDTTLAVPGDKPSALFFFSVGCGECAGGAKSLDKAAQAFDKAGKKANFLAVDMDPNESKQTIMQFLDYIKAPALPATIDKGAALSQRYQVAALSTLIVVAPQGKVTYRATDPSADQIQDALKKAG
type: DOMAIN
name: Thioredoxin_domain
description: Thioredoxin domain

phrase: MTSPSPTARRTRLRRRTALALAAAATAALTLSACGTDTKANTPATR
type: CONSERVED_SITE
name: TAT_signal
description: Twin-arginine translocation pathway, signal sequence
Protein sequence:
MASSSRTALPSAVLALRLLTLALLAASLAVIAADKLTLDFGGGLPPKKITFKDVYAYRYVLAIAVIGCAYTLLQIPFVAVSIAKRKRMIGGSENVALFLIFADVIFALLVATGAGAGFGLTYDAKSAFGGSKLPGEVVRFFNMAYAAAGLMLLAAAAMALIIMLSIYSLVR

Annotated regions:
phrase: ALPSAVLALRLLTLALLAASLAVIAADKLTLDFGGGLPPKKITFKDVYAYRYVLAIAVIGCAYTLLQIPFVAVSIAKRKRMIGGSENVALFLIFADVIFALLVATGAGAGFGLTYDAKSAFGGSKLPGEVVRFFNMAYAAAGLMLLAA
type: DOMAIN
name: CASP_dom
description: Casparian strip membrane protein domain
Protein sequence:
MRVMGIQRNCQQWWIWVSLGFWMLYSGMGNLWVTVYYGVPVWKEAQTTLFCASDAKAYEREVHNIWATHACVPTDPNPQEMKLVNVTENFNMWKNYMVEQMHEDIISLWDQSLKPCVKLTPLCVTLRCTNITMTNITDTNMTNIMGSINDTMKNCSFNVTTELRDKKQQTYALFYKLDIISLNNDSNTEYRLINCNTSTITQACPKVTFDPIPIHYCAPAGYAILKCNNNTFNGSGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEKEIIIRSENITDNTKTIIVHLNESVRIVCTRPGNNTRRSIRIGPGQTFYTTGEVIGDIRNAHCNITRHNWTQTLQKVGKKLQEHFNNKTLKFNSSSGGDLEITTHTFNCRGEFFYCNTSGLFNGVYIEGNYTHNIKNSNENITLQCRIKQIINMWQEVGRAIYAPPIAGNITCVSNITGLLLTRDGGANVSEETFRPGGGDMRDNWRSELYKYKVVEIKPLGIAPTEAKRRVVRREKRAVIGAVFLGFLGAAGSTMGAASIALTAQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQARVLALERYLRDQQLLGIWGCSGKLICTTTVPWNSSWSNKSVNQIWNNMTWMQWEKEIDNYTGTIYRLLEESQNQQERNEKDLLELNSWNSLWNWFDITNWLWYIKIFIMIVGGLIGLRITFAVLSIVNRVRQGYSPLSFQTLTPNQRGPDRLGRIEEEGGEQDRNRSVRLVSGFLALAWDDLRSLCLFSYHQLRTFIL

Annotated regions:
phrase: LWVTVYYGVPVWKEAQTTLFCASDAKAYEREVHNIWATHACVPTDPNPQEMKLVNVTENFNMWKNYMVEQMHEDIISLWDQSLKPCVKLTPLCVTLRCTNITMTNIT
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: IMGSINDTMKNCSFNVTTELRDKKQQTYALFYKLDIISLNNDSNTEYRLINCNTSTITQACPKVTFDPIPIHYCAPAGYAILKCNNNTFNGSGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEKEIIIRSENITDNTKTIIVHLNESVRIVCTRPGNNTRRSIRIGPGQTFYTTGEVIGDIRNAHCNITRHNWTQTLQKVGKKLQEHFNNKTLKFNSSSGGDLEITTHTFNCRGEFFYCNTSGLFNGVYIEGNYTHNIKNSNENITLQCRIKQIINMWQEVGRAIYAPPIAGNITCVSNITGLLLTRDGGANVSEETFRPGGGDMRDNWRSELYKYKVVEIKPLGIAPTEAKRRVVRREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: MGAASIALTAQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQARVLALERYLRDQQLLGIWGCSGKLICTTTVPWNSSWSNKSVNQIWNNMTWMQWEKEIDNYTGTIYRLLEESQNQQERNEKDLLELNSWNSLWNWFDITNWLWYIKIFIMIVGGLIGLRITFAVLSIVNRVRQGYSPLSFQTL
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: AQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQARVLALERYLRDQQLLGIWGCSGKLICTTTVPWNSSWSNKSVNQIWNNMTWMQWEKEIDNYTGTIYRLLEESQNQQERNEKDLLELN
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MVLQKNWQSLIKPEKLEVEPGGEPLRTATVVAEPLERGFGMTLGNAIRRVLLSSLQGAAVTAIQIDGVLHEFSSVAGVREDVTDIVLNVKQLALRMHGEGPKRMVLTATGPGEVRAGQIQTGHDIEVMNPDLVICTLDEGVKFGMEFTVNLGKGYVPAAANRPEDAPIGLIPVDAIYSPVRRVSYKVEPTRVGQVTDYDRLLLTVETNGAVTPEDAVALAARILQDQLQLFINFDEPRPVRTEEPQDDLPFNRNLLRKVDELELSVRSANCLKNDNIVYIGDLVQKTEQEMLRTPNFGRKSLNEIKEVLTSMGLSLGMNVPAWPPENIEDLAKRLDEPF

Annotated regions:
phrase: RNLLRKVDELELSVRSANCLKNDNIVYIGDLVQKTEQEMLRTPNFGRKSLNEIKEVL
type: DOMAIN
name: RNAP_asu_C
description: RNA polymerase, alpha subunit, C-terminal

phrase: EPLERGFGMTLGNAIRRVLLSSLQGAAVTAIQIDGVLHEFSSVAGVREDVTDIVLNVKQLALRMHGEGPKRMVLTATGPGEVRAGQIQTGHDIEVMNPDLVICTLDEGVKFGMEFTVNLGKGYVPAAANRPEDAPIGLIPVDAIYSPVRRVSYKVEPTRVGQVTDYDRLLLTVETNGAVTPEDAVALAARILQDQ
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: IQIDGVLHEFSSVAGVREDVTDIVLNVKQLALRMHGEGPKRMVLTATGPGEVRAGQIQTGHDIEVMNPDLVICTLDEGVKFGMEFTVNLGKGYVPAAANRPEDAPIGLIPVDAIY
type: DOMAIN
name: DNA-dir_RNA_pol_insert
description: DNA-directed RNA polymerase, insert domain

phrase: TATVVAEPLERGFGMTLGNAIRRVLLSSLQGAAVTAIQIDGVLHEFSSVAGVREDVTDIVLNVKQLALRMHGEGPKRMVLTATGPGEVRAGQIQTGHDIEVMNPDLVICTLDEGVKFGMEFTVNLGKGYVPAAANRPEDAPIGLIPVDAIYSPVRRVSYKVEPTRVGQVTDYDRLLLTVETNGAVTPEDAVALAARILQDQLQLFIN
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type
Protein sequence:
MLNKQFLEIKSKKKINLLNFNLQKMINFVLQLGEKKFRAIQIMEWIYKKNCINFKNMNNLNSSLQEKLKKTSIIQLPQCINELKSIDGTIKWNFLFNTEFIETIYIPEKKRATLCISSQAGCVLGCKFCATGKLGYTRNLLVSEIIGQIWYAIDKINQYRNRNHILSPIKNIVMMGMGEPLLNLKNIIIAIDIMLHKYGFNFSKNKVTLSTAGLVPAINKIAGKIDISLAISLHASNDYIRNMIMPINKRYNIKMLLSSVRNYLKKSTANRGVVTIEYVMLLYVNDYKHHAKELACLLKNIPCKINLIPWNTIKNSSYKCSNYNRITTFCEYLKSKGFVIMIRKNRGSDIQAACGQLTGI

Annotated regions:
phrase: SSQAGCVLGCKFCATGKLGYTRNLLVSEIIGQIWYAIDKINQYRNRNHILSPIKNIVMMGMGEPLLNLKNIIIAIDIMLHKYGFNFSKNKVTLSTAGLVPAINKIAGKIDISLAISLHASNDYIRNMIMPINKRYNIKMLLSSVRNYLKKSTANRGVVTIEYVMLLYVN
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: EKKRATLCISSQAGCVLGCKFCATGKLGYTRNLLVSEIIGQIWYAIDKINQYRNRNHILSPIKNIVMMGMGEPLLNLKNIIIAIDIMLHKYGFNFSKNKVTLSTAGLVPAINKIAGKIDISLAISLHASNDYIRNMIMPINKRYNIKMLLSSVRNYLKKSTANRGVVTIEYVMLLYVNDYKHHAKELACLLKNIPCKINLIPWNTIKNSSYKCSNYNRITTFCEYLKSKGFVIMIRKNRGS
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SKKKINLLNFNLQKMINFVLQLGEKKFRAIQIMEWIYKKNCINFKNMNNLNSSLQEKLKKTSIIQLPQCINELKSIDGTIKWNFLFNTEFIETIYIPEKKRATLCISSQAGCVLGCKFCATGKLGYTRNLLVSEIIGQIWYAIDKINQYRNRNHILSPIKNIVMMGMGEPLLNLKNIIIAIDIMLHKYGFNFSKNKVTLSTAGLVPAINKIAGKIDISLAISLHASNDYIRNMIMPINKRYNIKMLLSSVRNYLKKSTANRGVVTIEYVMLLYVNDYKHHAKELACLLKNIPCKINLIPWNTIKNSSYKCSNYNRITTFCEYLKSKGFVIMIRKNRGSDIQAACGQL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: INLLNFNLQKMINFVLQLGEKKFRAIQIMEWIYKKNCINFKNMNNLNSSLQEKLKKTSI
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MAAPCEGQAFAVGVEKNWGAVVRSPEGTPQKIRQLIDEGIAPEEGGVDAKDTSATSQSVNGSPQAEQPSLESTSKEAFFSRVETFSSLKWAGKPFELSPLVCAKYGWVTVECDMLKCSSCQAFLCASLQPAFDFDRYKQRCAELKKALCTAHEKFCFWPDSPSPDRFGMLPLDEPAILVSEFLDRFQSLCHLDLQLPSLRPEDLKTMCLTEDKISLLLHLLEDELDHRTDERKTTIKLGSDIQVHVTACILSVCGWACSSSLESMQLSLITCSQCMRKVGLWGFQQIESSMTDLDASFGLTSSPIPGLEGRPERLPLVPESPRRMMTRSQDATFSPGSEQAEKSPGPIVSRTRSWDSSSPVDRPEPEAASPTTRTRPVTRSMGTGDTPGLEVPSSPLRKAKRARLCSSSSSDTSSRSFFDPTSQHRDWCPWVNITLGKESRENGGTEPDASAPAEPGWKAVLTILLAHKQSSQPAETDSMSLSEKSRKVFRIFRQWESLCSC

Annotated regions:
phrase: ACILSVCGWACSSSLESMQLSLITCSQCMRKVGLWGFQQIESSMTDLDASFGLTSSPIPGLEGRPERLPLVPESPRRMMTRSQDATFSPGSEQAEKSPGPIVSRTRSWDSSSPVDRPEPEAASPTTRTRPVTRSMGTGDTPGLEVPSSPLRKAKRARLCSSSSSDTSSRSFFDPTSQHRDWCPWVNITLGKESRENGGTEPDASAPAEPGWKAVLTILLAHKQ
type: DOMAIN
name: NuBaID_C
description: NuBaID, C-terminal domain

phrase: TSKEAFFSRVETFSSLKWAGKPFELSPLVCAKYGWVTVECDMLKCSSCQAFLCASLQPAFDFDRYKQRCAELKKALCTAHEKFCFWPDSPSPDRFGMLPLDEPAILVSEFLDRFQSLCHLDLQLPS
type: DOMAIN
name: NuBaID_N
description: NuBaID, N-terminal domain
Protein sequence:
MVTLSNTSMVGGRDLPSTGFAWWSGNARLINLSGKLLGAHVAHAGLIVFWAGAMTLFEVAHFIPEKPMYEQGLILLPHIATLGWGVGPAGEVTDIFPFFVVGVLHLISSAVLGLGGIYHALRGPEVLEEYSSFFGYDWKDKNQMTNIIGYHLILLGCGALLLVFKAMFFGGVYDTWAPGGGDVRVITNPTLNPAIIFGYLLKAPFGGEGWIISVNNMEDIIGGHIWIGLICISGGIWHILTKPFGWARRALIWSGEAYLSYSLGALSLMGFIASVFVWFNNTAYPSEFYGPTGMEASQSQAFTFLVRDQRLGANIASAQGPTGLGKYLMRSPSGEIIFGGETMRFWDFRGPWLEPLRGPNGLDLDKLRNDIQPWQVRRAAEYMTHAPLGSLNSVGGVITDVNSFNYVSPRAWLATSHFVLGFFFLVGHLWHAGRARAAAAGFEKGIDRETEPTLFMPDLD

Annotated regions:
Protein sequence:
MSATRSTFLGSIFRTAKARILISPIARRSLPSPNFTSSRFHTSSSLRQSRIEGSIPRSFLPSIHVRFHSVSASTWFSSRRTSSQGRLASVSMYIQYSTSVPTRSLRRRISNRKKSSAKPILNVSKFHETISKLPPRFTPEELADAITLEEDPFLCFHLFNWASQQPRFTHENCSYHIAIRKLGAAKMYQEMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLVDRDSYDKLVNVLHKDL

Annotated regions:
phrase: NSFTYDYLIHGLCAQGRTINARELLSEMKGKGFV
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: DFISYRTLVDESCRKGKYDEATRLLEMLREKQLV
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: FTYDYLIHGLCAQGRTINARELLSEMKGKGFVP
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: LNCLVKGYVLSLHVNDALRIFHQMSVVYDCEP
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: SYNSLVNAFALSGEIDDAVKCLWEMIENGRVV
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: LNCLVKGYVLSLHVNDALRIFHQ
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: PNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAF
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: VVDFISYRTLVDESCRKGKYDEATRLL
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: NGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRV
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: NLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKA
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat
Protein sequence:
MNLIPMVIEQTNRGERSYDIYSRLLKDRIIFIGTGINDDIANSVIAQMLFLESEDPDKDIHLYINSPGGHVHAGLAIYDTMQYIRSDVSTICVGMAASMGAVLLAAGNEGKRFCLPNSRIMLHQPMGGAQGQAADVEIHAREIMKTKERLNQILAHHTGQPVEQISKDTDRDFFMSSEEAQKYGVIDDVLKRPPENS

Annotated regions:
phrase: RFCLPNSRIMLHQ
type: ACTIVE_SITE
name: ClpP_His_AS
description: ClpP, histidine active site

phrase: TICVGMAASMG
type: ACTIVE_SITE
name: ClpP_Ser_AS
description: ClpP, Ser active site
Protein sequence:
MDIRAAEISAILKDQIKNFGQEAEVTEVGQVLSVGDGIARVYGLDNVQAGEMVEFENGTRGMALNLETDNVGIVIFGADREIKEGQTVKRTRSIVDTPVGKGLLGRVVDALGNPIDGKGPIVATERKRVDVKAPGIIPRKSVHEPMATGLKSIDALIPIGRGQRELIIGDRQTGKTAIALDTILNQKPLNVEGAPEGQKLYCVYVAIGQKRSTVAQFVKVLEEQGALEYSIVVAATASDPAPMQYIAPFTGCTMGEYFRDNGMHAVIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDDEGNGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETDLFFQGIRPAVNVGLSVSRVGSSAQTKAMKKVAGKIKGELAQYREMAAFAQFGSDLDASTQRLLNRGSRLTELLKQPQFSPLKMEEQVVVIYAGVNGYLDPLPVAKVRAFEDGLLSLLRGKNVEILNAIRDSRDLSDDTAGKLKAVVEAYAKTFA

Annotated regions:
phrase: GLKSIDALIPIGRGQRELIIGDRQTGKTAIALDTILNQKPLNVEGAPEGQKLYCVYVAIGQKRSTVAQFVKVLEEQGALEYSIVVAATASDPAPMQYIAPFTGCTMGEYFRDNGMHAVIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDDEGNGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETDLFFQGIRPAVNVGLSV
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_nucl-bd
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain

phrase: TEVGQVLSVGDGIARVYGLDNVQAGEMVEFENGTRGMALNLETDNVGIVIFGADREIKEGQTVKR
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_N
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain

phrase: IVDTPVGKGLLGRVVDALGNPIDGKGPIVATERKRVDVKAPGIIPRKSVHEPMATGLKSIDALIPIGRGQRELIIGDRQTGKTAIALDTILNQKPLNVEGAPEGQKLYCVYVAIGQKRSTVAQFVKVLEEQGALEYSIVVAATASDPAPMQYIAPFTGCTMGEYFRDNGMHAVIIYDDLSKQAVAYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKLNDDEGNGSLTALPVIETQANDVSAYIPTNVISITDGQIFLETDLFFQGIRPAVNVGLSVSRV
type: DOMAIN
name: ATP_synth_F1_a_nt-bd_dom
description: ATP synthase, F1 complex, alpha subunit nucleotide-binding domain

phrase: MKKVAGKIKGELAQYREMAAFAQFGSDLDASTQRLLNRGSRLTELLKQPQFSPLKMEEQVVVIYAGVNGYLDPLPVAKVRAFEDGLLSLLRGKNVEILNAIRDSRDLSDDTAGKLKAVVEAYAKT
type: DOMAIN
name: ATP_synth_asu_C
description: ATP synthase, alpha subunit, C-terminal

phrase: QTKAMKKVAGKIKGELAQYREMAAFAQFGSDLDASTQRLLNRGSRLTELLKQPQFSPLKMEEQVVVIYAGVNGYLDPLPVAKVRAFEDGLLSLLRGKNVEILNAIRDSRDLSDDTAGKLKAVVE
type: DOMAIN
name: ATP_synth_asu_C
description: ATP synthase, alpha subunit, C-terminal

phrase: PAVNVGLSV
type: ACTIVE_SITE
name: ATPase_a/bsu_AS
description: ATPase, alpha/beta subunit, nucleotide-binding domain, active site
Protein sequence:
MLSYDSVAVLGGGAWGTALAQTGARAGRDVVLWEHDANNAQQLQQKRESLYLPGVTLDSSIKVTRDLSEAARAQAILLVVPAQVLRQVVTSLAPLIADRTPLVACAKGIEHGTHKFMTEIIAEAAPQATPAILSGPSFAADVARGLPTAVTIAATDAGIAQALAQAMNSGTFRPYHSTDVRGVELGGATKNVLAIAAGIVEGRKLGASALAAMTTRGFVELMRFGKAYGARIETMHGLSGLGDLTMCCSTPQSRNFSFGVALGRGESASEASHGKLAEGAFTAPVLLEMARLKNVEMPISTAVAAILAGQISVDAAIESLLTRPLKAEE

Annotated regions:
phrase: VAVLGGGAWGTALAQTGARAGRDVVLWEHDANNAQQLQQKRESLYLPGVTLDSSIKVTRDLSEAARAQAILLVVPAQVLRQVVTSLAPLIADRTPLVACAKGIEHGTHKFMTEIIAEAAPQATPAILSGPSFAADVARGLPTAVTIAATD
type: DOMAIN
name: G3P_DH_NAD-dep_N
description: Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal

phrase: DVRGVELGGATKNVLAIAAGIVEGRKLGASALAAMTTRGFVELMRFGKAYGARIETMHGLSGLGDLTMCCSTPQSRNFSFGVALGRGESASEASHGKLAEGAFTAPVLLEMARLKNVEMPISTAVAAILAGQISVDAAI
type: DOMAIN
name: G3P_DH_NAD-dep_C
description: Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal
Protein sequence:
MMKPVLHFSKLYEVKKLLRKSRLYTVCEESRCPNISECFGNKTATFMILGNRCTRRCAFCNVEKGFPKGVDPEEPYRLLEAVKTLGLKYVVITSVTRDDLPDGGASHFAKCIRVLKENIEDIKVEVLIPDFRGNKKALEVVLKEKPVVLNHNVETVPRLYPSVRIGANYKRSLNILKWSKEIDKSVYTKSALILGFGERKEEVIKVMEDLRSVDCDFLVLGQYYQPSLKHHPVVKYYSEEEFKEFEEIGYEMGFKFVVSKPNARSSYKAFESLLST

Annotated regions:
phrase: MILGNRCTRRCAFCNVEKGFPKGVDPEEPYRLLEAVKTLGLKYVVITSVTRDDLPDGGASHFAKCIRVLKENIEDIKVEVLIPDFRGNKKALEVVLKEKPVVLNHNVETVPRLYPSVRIGANYKRSLNILKWSKEIDKSVYTKSALILGFGERKEEVIKVMED
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SKLYEVKKLLRKSRLYTVCEESRCPNISECFGNKTATFMILGNRCTRRCAFCNVEKGFPKGVDPEEPYRLLEAVKTLGLKYVVITSVTRDDLPDGGASHFAKCIRVLKENIEDIKVEVLIPDFRGNKKALEVVLKEKPVVLNHNVETVPRLYPSVRIGANYKRSLNILKWSKEIDKSVYTKSALILGFGERKEEVIKVMEDLRSVDCDFLVLGQYYQPSLKHHPVVKYYSEEEFKEFEEIGYEMGFKFVVSKPNARSSYKAFES
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: FGNKTATFMILGNRCTRRCAFCNVEKGFPKGVDPEEPYRLLEAVKTLGLKYVVITSVTRDDLPDGGASHFAKCIRVLKENIEDIKVEVLIPDFRGNKKALEVVLKEKPVVLNHNVETVPRLYPSVRIGANYKRSLNILKWSKEIDKSVYTKSALILGFGERKEEVIKVMEDLRSVDCDFLVLGQYYQPSLKHHPVVKYYSEEEFKEFEEIGYEMGF
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TATFMILGNRCTRRCAFCNVEKGFPKGVDPEEPYRLLEAVKTLGLKYVVITSVTRDDLPDGGASHFAKCIRVLKENIEDIKVEVLIPDFRGNKKALEVVLKEKPVVLNHNVETVPRLYPSVRIGANYKRSLNILKWSKEIDKSVYTKSALILGFGERKEEVIKVMEDLRSVDCDFLVLGQYYQPSLKHHPVVKYYSEEEFKEFEE
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain
Protein sequence:
MGLKINRPRRGSMGVYPRKRAADIVPRVRTWPEVNLGKPTLLGFAAYKAGMLHAVVVDDRPTSPLYGKEVVKAVTVLDAPPLYVAAVRLYTLDPTNGYKVAVGEAWVSEPPADLRRVLTLPEKFDTEKQLKALEEYRDVAVDVRVLVATQPRLSGIGKKTPEVLEIPVGGVPSIDERINFAISLLGKTVSPKDVFTPGQLVDVIAVTKGKGYQGVVKRFGVTILPRWHKHRKGHRRTGTIGPQAPALMFTQPRPGQMGFHQRTEYNKRILKIGDNGAEITPKSGFPHYGVIKGPYILLQGSVPGARKRLVVLRYPVRPPKKAPPAAEPQVVWVSSQSI

Annotated regions:
phrase: FTPGQLVDVIAVTKGKGYQGVVK
type: CONSERVED_SITE
name: Ribosomal_uL3_CS
description: Large ribosomal subunit protein uL3, conserved site
Protein sequence:
MGLEKSFILFSLLVLVLGWVQPSLGVESRESSADKFKRQHMDPESPSKSSPTYCNQMMKRQGMTKGSCKPVNTFVHEPLEDVQAICSQGQVTCKNGRNNCHKSSSTLHITECRLKGSSKYPNCEYTTTDSQKHIIIACEGNPLVPVHYDDTV

Annotated regions:
phrase: CKPVNT
type: ACTIVE_SITE
name: RNaseA_AS
description: Ribonuclease A, active site

phrase: RESSADKFKRQHMDPESPSKSSPTYCNQMMKRQGMTKGSCKPVNTFVHEPLEDVQAICSQGQVTCKNGRNNCHKSSSTLHITECRLKGSSKYPNCEYTTTDSQKHIIIACEGNPLVPVHYDDT
type: DOMAIN
name: RNaseA_domain
description: Ribonuclease A-domain

phrase: SADKFKRQHMDPESPSKSSPTYCNQMMKRQGMTKGSCKPVNTFVHEPLEDVQAICSQGQVTCKNGRNNCHKSSSTLHITECRLKGSSKYPNCEYTTTDSQKHIIIACEGNPLVPVHY
type: DOMAIN
name: RNaseA_domain
description: Ribonuclease A-domain
Protein sequence:
MDIIGGQHLRQMWDDLADVYGHKTALICESSGGVVNRYSYLELNQEINRTTNLFYTLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLREESAWILQNSQACLLVTSAQFYPMYQQIQQEDATQLRHICLTDVALPADDGVSSFTQLKNQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLVEKYSARAFWGQVQKYRATVTECIPMMIRTLMAQPPSANDRQHRLREVMFYLNLSEQEKDAFCERFGVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRDDHNRPLPAGEIGEICIKGVPGKTIFKEYFLNPKATAKVLEADGWLHTGDTGYCDEEGFFYFVDRRCNMIKRGGENVSCVELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSGKIIRKNLK

Annotated regions:
phrase: ELENIIATHPKIQDIVVVGIKDSIRDEAIKAFVVLNEGETLSEEEFFRFCEQNMAKFKVPSYLEIRKDLPRNCSG
type: DOMAIN
name: AMP-bd_C
description: AMP-binding enzyme, C-terminal domain

phrase: ADVYGHKTALICESSGGVVNRYSYLELNQEINRTTNLFYTLGIRKGDKVALHLDNCPEFIFCWFGLAKIGAIMVPINARLLREESAWILQNSQACLLVTSAQFYPMYQQIQQEDATQLRHICLTDVALPADDGVSSFTQLKNQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCTAAMAAFSAGATFVLVEKYSARAFWGQVQKYRATVTECIPMMIRTLMAQPPSANDRQHRLREVMFYLNLSEQEKDAFCERFGVRLLTSYGMTETIVGIIGDRPGDKRRWPSIGRAGFCYEAEIRDDHNRPLPAGEIGEICIKGVPGKTIFKEY
type: DOMAIN
name: AMP-dep_synth/lig_dom
description: AMP-dependent synthetase/ligase domain

phrase: ILFTSGTTSRP
type: CONSERVED_SITE
name: AMP-binding_CS
description: AMP-binding, conserved site
Protein sequence:
MLETSQTIPELVNWTREREFSLSLSTERLAFLLAIAIYNNERLDGEMLETDLIDIFRHISNTFEQSAETISTRANNSINELVKQRFLNRFSSEFTEGLSIYRLTPLGVGVSDYYIRQREFSALRLSVQLSIVADEIQRASEAAEEGGDEHYWRKNVFAPLKYSVAEIFDSIDLSQRMMDENQQHIKEEIAELLTKDWQTAIASCERLLDETSGNLRELQDTLNAAGDKLQSQLLRIQDCVIGHDNLYFVEQLIVDLQAKLDRIISWGQQAIDLWIGYDRHVHKFIRTAIDLDKNRVFSQRLRQSIHHYFDHPWFLWIAQAERLIDLREEELTLREEEALGELPEELQYESLADLHEQIVETMQSLLIEYRLQNTPIDLSEVLTAQLKQYPLAKHFDIARIIIDQAVRLGLAQDDLNGIYPNWRSINENGAEVQAHVIDKY

Annotated regions:
phrase: KFIRTAIDLDKNRVFSQRLRQSIHHYFDHPWFLWIAQAERLIDLREEELTLREEEALGELPEELQYESLADLHEQIVETMQSLLIEYRLQNTPIDLSEVLTAQLKQYPLAKHFDIARIIIDQAVRLGLAQDDLNGIYPNWRSINENGAEVQAHVIDK
type: DOMAIN
name: MukF_C
description: Chromosome partition protein MukF, C-terminal domain

phrase: ETSQTIPELVNWTREREFSLSLSTERLAFLLAIAIYNNERLDGEMLETDLIDIFRHISNTFEQSAETISTRANNSINELVKQRFLNRFSSEFTEGLSIYRLTPLGVGVSDYYIR
type: DOMAIN
name: MukF_WHTH
description: Chromosome partition protein MukF, winged-helix domain

phrase: SALRLSVQLSIVADEIQRASEAAEEGGDEHYWRKNVFAPLKYSVAEIFDSIDLSQRMMDENQQHIKEEIAELLTKDWQTAIASCERLLDETSGNLRELQDTLNAAGDKLQSQLLRIQDCVIGHDNLYFVEQLIVDLQAKLDRIISWGQQAIDLWIGYDRH
type: DOMAIN
name: MukF_M
description: Chromosome partition protein MukF, middle domain

phrase: LPEELQYESLADLHEQIVETMQSLLIEYRLQNTPIDLSEVLTAQLKQYPLAKHFDIARIIIDQAVRLGLAQDDLNGIYPNWRSINENGAEVQAHVI
type: DOMAIN
name: MukF_C
description: Chromosome partition protein MukF, C-terminal domain
Protein sequence:
MGEDTDTRKINHSFLRDHSYVTEADIISTVEFNHTGELLATGDKGGRVVIFQREPESKNAPHSQGEYDVYSTFQSHEPEFDYLKSLEIEEKINKIKWLPQQNAAHSLLSTNDKTIKLWKITERDKRPEGYNLKDEEGKLKDLSTVTSLQVPVLKPMDLMVEVSPRRIFANGHTYHINSISVNSDCETYMSADDLRINLWHLAITDRSFNIVDIKPANMEDLTEVITASEFHPHHCNLFVYSSSKGSLRLCDMRAAALCDKHSKLFEEPEDPSNRSFFSEIISSVSDVKFSHSGRYMLTRDYLTVKVWDLNMEARPIETYQVHDYLRSKLCSLYENDCIFDKFECAWNGSDSVIMTGAYNNFFRMFDRNTKRDVTLEASRESSKPRAVLKPRRVCVGGKRRRDDISVDSLDFTKKILHTAWHPAENIIAIAATNNLYIFQDKVNSDMH

Annotated regions:
phrase: EFDYLKSLEIEEKI
type: CONSERVED_SITE
name: PP2A_PR55_CS
description: Protein phosphatase 2A regulatory subunit PR55, conserved site

phrase: NGHTYHINSISVNS
type: CONSERVED_SITE
name: PP2A_PR55_CS
description: Protein phosphatase 2A regulatory subunit PR55, conserved site

phrase: VDIKPANMEDLTEVITASEFHPHHCNLFVYSSSKGSLRLC
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: SFLRDHSYVTEADIISTVEFNHTGELLATGDKGGRVVIF
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: EFDYLKSLEIEEKINKIKWLPQQNAAHSLLSTNDKTIKLW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: EVSPRRIFANGHTYHINSISVNSDCETYMSADDLRINLW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: DDISVDSLDFTKKILHTAWHPAENIIAIAATNNLYIF
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: DPSNRSFFSEIISSVSDVKFSHSGRYMLTRDYLTVKVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat
Protein sequence:
MASQYPGHQLDDIPSTNVYRPPPRHEDDEAEHALLHQNSAYQSQYDDPHSRPLTPGQESVYTLNESYVGGDPSKVPVTSYNPQYTQPYGQGYGMNNSRPGFPTPGPPDPIDRTDSTEAWRERQAPGFGTIKRYATRKVKLVQGSVLSIDYPVPSAIQNAIQAKYRNDLEGGSEEFTHMRYTAATCDPDDFTLKNGYNLRPAMYNRHTELLIAITYYNEDKVLTARTLHGVMQNIRDIVNLKKSEFWNKGGPAWQKIVVCLVFDGIDPCDKNTLDVLATIGVYQDGVMKKDVDGKETVAHIFEYTTQLSVTANQQLIRPNDNDATSLPPAQMIFCLKQKNRKKINSHRWLFNAFGRILNPEVCILLDAGTKPGSKSLMALWQAFYNDKDLGGACGEIHAMLGPGGVFGRKLLNPLVAAQNFEYKISNILDKPLESSFGYVSVLPGAFSAYRFRAIMGRPLEQYFHGDHTLSKTLGKKGIEGMNIFKKNMFLAEDRILCFELVAKAGSKWHLSYVKASKAETDVPEGPPEFIGQRRRWLNGSFAASMYCLMHFSRMYKSGHNLIRMFFLHIQMIYNIVSVLLSWFSLASFWLTTKVLMDLVGQPSTSNDNAAFPFGNTATPIINTILQYLYLAFLLLQFILALGNRPKGSKVAYIISFCLFGLIQLYVIVLSMYLVVRAFTTKNGTDIVTNEGANEFVKSFFASTGPGIVIIALAATFGLYFVASFLYMDPWHMFTSFAQYLLLMPSFINILMIYAFSNWHDVSWGTKGS

Annotated regions:
phrase: TRKVKLVQGSVLSIDYPVPSAIQNAIQAKYRNDLEGGSEEFTHMRYTAATCDPDDFTLKNGYNLRPAMYNRHTELLIAI
type: DOMAIN
name: Chitin_synth_N
description: Chitin synthase N-terminal