nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MHSYVRPNQFVALRLPSEFTKIQKIEPDSTVFLGKFGSFPANQIIGRPFYLTFEILDDADEKDGSCLRIIPAAELHAETLIAEGEGDGEELDTNEDGTPMRTNREIVDDASTQKLTWEEIEALKKESGGAGREIISKLLESHQTLDQKTSFSLAKYMLRKRRKYMKRFTVLPLDVSILTNHMMEDQGAARIMELRDEMVGLLGCWGNVHHGGDASLDEAIAAKPNGRYLVVDDTGGLVVAAMAERMGILYPHDGDEYEEQGSSDEPKKNEAEQAHDDEQPPTESSTHRPARPAHMSASGNSITVLHPNKQPNLSLLKYFGYSQDNPDETHPLHKHLKTISWLQLLDPNADPIYSEEPEIIPESELYTMKSNKRGAYYRKRNRWTRVQSVVNEARAGEFDGLIVATVMDPSSVLKYAVPLLAGSAHVAVYSPSIEPLTELSDLYSTAKKTAFINRRQQLREQKLQQSSDQPDANETELQDSDLSELMAEFYLDPTLLLAPTLQNSRVRPWQVLPGRTHPLMSMRGGAEGYIFHAVRVIPTQQTIQAAGNLSRKKRKVVTQETPTTAVDSGSGVDVEMKS

Annotated regions:
Protein sequence:
MFNNLTQRFLKIIKKISNKGRLTEKNIKETLREIRIALLEADVALPVVKNFIPSIQKSVIGNQVNKSLTPGQELIKIVKKELTLILGKENHSLNLSVTPPAIILMIGLQGSGKTTTTAKLGQLIRTKYKKKVIVTSIDIYRLAAIKQLKMLSKQAKISFFPSNNTQSPKDIVQHAIQHAKLKFYDVLLIDTAGRLQIDKKMMNELLDVYNISHPIETFFVADAMFGQDSINVINEFNKYLPVSSFIITKTDSDTRAGIILSIKYLTKKPIKFIGTGEKLEELELFYPDRIASRILGMGDMLSLIENIENKIDKKHIKKFSNTIKKYNTFNFNDMLLHINQIKKIGGVNSILGKLPKTQTIFNSFQNNIDENILLKMKTIINSMTISERHQPELIKGSRKRRISLGSGIPIPEINQLLKQFNNIKKIMKTIKKGGVTKIMQGINNIIKNKF

Annotated regions:
phrase: LTQRFLKIIKKISNKGRLTEKNIKETLREIRIALLEADVALPVVKNFIPSIQKSVIGNQVNKSLTPGQELIKIVKKE
type: DOMAIN
name: Signal_recog_particl_SRP54_hlx
description: Signal recognition particle SRP54, helical bundle

phrase: PAIILMIGLQGSGKTTTTAKLGQLIRTKYKKKVIVTSIDIYRLAAIKQLKMLSKQAKISFFPSNNTQSPKDIVQHAIQHAKLKFYDVLLIDTAGRLQIDKKMMNELLDVYNISHPIETFFVADAMFGQDSINVINEFNKYLPVSSFIITKTDSDTRAGIILSIKYLTKKPIKFIGTGEKLEELELFYPDRIASRIL
type: DOMAIN
name: SRP54_GTPase_dom
description: Signal recognition particle, SRP54 subunit, GTPase domain

phrase: PPAIILMIGLQGSGKTTTTAKLGQLIRTKYKKKVIVTSIDIYRLAAIKQLKMLSKQAKISFFPSNNTQSPKDIVQHAIQHAKLKFYDVLLIDTAGRLQIDKKMMNELLDVYNISHPIETFFVADAMFGQDSINVINEFNKYLPVSSFIITKTDSDTRAGIILSIKYLTKKPIKFIGTGEKLEELELFYPDRIASRILGMGDM
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: PAIILMIGLQGSGKTTTTAKLGQLIRTKYKKKVIVTSIDIYRLAAIKQLKMLSKQAKISFFPSNNTQSPKDIVQHAIQHAKLKFYDVLLIDTAGRLQIDKKMMNELLDVYNISHPIETFFVADAMFGQDSINVINEFNKYLPVSSFIITKTDSDTRAGIILSIKYLTKKPIKFIGTGEKLEELELFYPDRIASRIL
type: DOMAIN
name: SRP54_GTPase_dom
description: Signal recognition particle, SRP54 subunit, GTPase domain

phrase: MFNNLTQRFLKIIKKISNKGRLTEKNIKETLREIRIALLEADVALPVVKNFIPSIQKSVIGNQVNKSLTPGQELIKIVKKELTLI
type: DOMAIN
name: Signal_recog_particl_SRP54_hlx
description: Signal recognition particle SRP54, helical bundle

phrase: PIKFIGTGEKLEE
type: DOMAIN
name: SRP54_GTPase_dom
description: Signal recognition particle, SRP54 subunit, GTPase domain

phrase: TFNFNDMLLHINQIKKIGGVNSILGKLPKTQTIFNSFQNNIDENILLKMKTIINSMTISERHQPELIKGSRKRRISLGSGIPIPEINQLLKQFNNIKKI
type: DOMAIN
name: Signal_recog_particle_SRP54_M
description: Signal recognition particle, SRP54 subunit, M-domain
Protein sequence:
MESPAFSKPLKDKINPWGPLIIMGILVRAGASVQRDSPHQVFNVTWKITNLMTGQTANATSLLGTMTDTFPKLYFDLCDLVGDNWDDPEPDIGDGCRSPGGRKRTRLYDFYVCPGHTVLTGCGGPREGYCGKWGCETTGQAYWKPSSSWDLISLKRGNTPKGQGPCFDSSVGSGSIQGATPGGRCNPLVLEFTDAGKRASWDAPKTWGLRLYRSTGADPVTLFSLTRQVLNVGPRVPIGPNPVITEQLPPSQPVQIMLPRPPRPPPSGAASMVPGAPPPSQQPGTGDRLLNLVEGAYQALNLTSPDKTQECWLCLVSGPPYYEGVAVLGTYSNHTSAPANCSVTSQHKLTLSEVTGQGLCIGAVPKTHQALCNTTQKTSDGSYYLASPAGTIWACSTGLTPCLSTTVLNLTTDYCVLVELWPKVTYHSPNYVYGQFEKKTKYKREPVSLTLALLLGGLTMGGIAAGVGTGTTALVATKQFEQLQAAIHTDLGALEKSVSALEKSLTSLSEVVLQNRRGLDLLFLKEGGLCAALKEECCFYADHTGVVRDSMAKLRERLNQRQKLFESGQGWFEGLFNRSPWFTTLISTIMGPLIVLLLILLFGPCILNRLVQFVKDRISVVQALVLTQQYHQLKSIDPEEVESRE

Annotated regions:
Protein sequence:
MVYKEVQERVRLALRQALDEMLHEAGKEWDGEITFDDTPSIELGDFGTAVSFQLARVFRKAPKFIAEELVGRVKEKLPEEIRDVKAVNGYINFYLDYEFFGKALVREILEKGEKYGESELGSGKKVIVEHTSVNPTKPLHMGHARNAVLGDTMARIMRKLGYTVEVQNYIDDLGVQFAQVLWGYLNLKEEFERIEAELREKGLKEDFIDHVMGLLYVEVNKKLEENPEVDKEVRELMKKLEEGDNEIAEVGRKLAERVVRAQMLTTYRMGITYDLLSWESDIMKSGIFGEAYGLIEKNENFFWATEGKYKGAFVMDLRKLFPDMKNPFLVLRRSDGTATYTGKDIAYHLWKFGKVKADMLYKLWDRVEDHETWTTAPDGKEMPGKFGRADIVINVIGAEQKHPQMAIKYALQLLGFEDAAENFHHLAYEHVVRPEGSFSGRKGTWVGFTVDEVLNEAVQRARELVEQKNPNLSDEEKDEIAEAVGVGAVRYNLVKYSPDKVITFRWEDVLNFEGDSAPYLQYAHARCASILRKAEESGVETDWNALLEKADFSKLTNREKELIKFLAKFPEVLESAGRDVKPHLVPAYLNELASLFNRFYMDHPVLKAEEGIREERLLLVLAVKQVLRNGLDVLGIKAPERM

Annotated regions:
phrase: LRQALDEMLHEAGKEWDGEITFDDTPSIELGDFGTAVSFQLARVFRKAPKFIAEELVGRVKEKLPEEIRDVKAVNGYINFY
type: DOMAIN
name: Arg-tRNA-synth_N
description: Arginyl tRNA synthetase N-terminal domain

phrase: KVIVEHTSVNPTKPLHMGHARNAVLGDTMARIMRKLGYTVEVQNYIDDLGVQFAQVLWGYLNLKEEFERIEAELREKGLKEDFIDHVMGLLYVEVNKKLEENPEVDKEVRELMKKLEEGDNEIAEVGRKLAERVVRAQMLTTYRMGITYDLLSWESDIMKSGIFGEAYGLIEKNENFFWATEGKYKGAFVMDLRKLFPDMKNPFLVLRRSDGTATYTGKDIAYHLWKFGKVKADMLYKLWDRVEDHETWTTAPDGKEMPGKFGRADIVINVIGAEQKHPQMAIKYALQLLGFEDAAENFHHLAYEHVVRPEGSFSGRK
type: DOMAIN
name: ArgRS_core
description: Arginyl-tRNA synthetase, catalytic core domain

phrase: LQYAHARCASILRKAEESGVETDWNALLEKADFSKLTNREKELIKFLAKFPEVLESAGRDVKPHLVPAYLNELASLFNRFYMDHPVLKAEEGIREERLLLVLAVKQVLRNGLDVLGIKAPER
type: DOMAIN
name: DALR_anticod-bd
description: DALR anticodon binding

phrase: PTKPLHMGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: ERVRLALRQALDEMLHEAGKEWDGEITFDDTPSIELGDFGTAVSFQLARVFRKAPKFIAEELVGRVKEKLPEEIRDVKAVNGYINFY
type: DOMAIN
name: Arg-tRNA-synth_N
description: Arginyl tRNA synthetase N-terminal domain

phrase: LQYAHARCASILRKAEESGVETDWNALLEKADFSKLTNREKELIKFLAKFPEVLESAGRDVKPHLVPAYLNELASLFNRFYMDHPVLKAEEGIREERLLLVLAVKQVLRNGLDVLGIKAPER
type: DOMAIN
name: DALR_anticod-bd
description: DALR anticodon binding

phrase: RADIVINVIGAEQKHPQMAIKYALQLLGFEDAAENFHHLAYEHVVRPEGSFSGRKGTWVGFTVDEVLNEAVQRARELVEQKNPNLSDEEKDEIAEAVGVGAVRYNL
type: DOMAIN
name: ArgRS_core
description: Arginyl-tRNA synthetase, catalytic core domain

phrase: VREILEKGEKYGESELGSGKKVIVEHTSVNPTKPLHMGHARNAVLGDTMARIMRKLGYTVEVQNYIDDLGVQFAQVLWGYLNLKEEFERIEAELREKGLKEDFIDHVMGLLYVEVNKKLEENPEVDKEVRELMKKLEEGDNEIAEVGRKLAERVVRAQMLTTYRMGITYDLLSWESDIMKSGIFGEAYGLIEKNENFFWATEGKYKGAFVMDLRKLFPDMKNPFLVLRRSDGTATYTGKDIAYHLWKFGKVKADMLYKL
type: DOMAIN
name: ArgRS_core
description: Arginyl-tRNA synthetase, catalytic core domain
Protein sequence:
MKNTYYITTPIYYVNDVSHIGHAYTSVASDVIARFMRCCGKDVMFLTGTDEHGQKVEKAAINKNIDPQSFTDKTSQNFRDLMVAMNISNDDFIRTTENRHKKAVAVFWQKLLDNGAIYEGFYEGWYSVRDEAFYDESEITEDKLAPTGAPVEWVKEPSYFFNLAKWQDKLLEFYELNPDFVRPISRRNEVISFVKSGLKDLSISRTTFNWGIKVPNNEKHVIYVWLDALVNYISALGYPDQQSNYSKFWPANLQVVGKDILRFHAVYWPAFLMAAEISPPKSIMVHGWWTNAGQKISKSLGNTIDPITLIDEFGVDQVRYFLMREVIFGADANFTRNNLITRINSELSNKIGNLLHRIVSFVYNNNDAKVPLIKSGVIDKIYELPILKTAMKFAQENILLMDKIEINKILENIINLAEDANIYIANEAPWNLKKTDYDKMLEVLYTLLEVLRYVAIMLQPFVPSSANKMLDQLGVAKEERLFKHLVRDHALKAGSNILEPSIIFPKI

Annotated regions:
phrase: YYITTPIYYVNDVSHIGHAYTSVASDVIARFMRCCGKDVMFLTGTDEHGQKVEKAAINKNIDPQSFTDKTSQNFRDLMVAMNISNDDFIRTTENRHKKAVAVFWQKLLDNGAIYEGFYEGWYSVRDEAFYDESEI
type: DOMAIN
name: Methionyl/Leucyl_tRNA_Synth
description: Methionyl/Leucyl tRNA synthetase

phrase: EWVKEPSYFFNLAKWQDKLLEFYELNPDFVRPISRRNEVISFVKSGLKDLSISRTTFNWGIKVPNNEKHVIYVWLDALVNYISALGYPDQQSNYSKFWPANLQVVGKDILRFHAVYWPAFLMAAEISPPKSIMVHGWWTNAGQKISKSLGNTIDPITLIDEFGVDQVRYFLMREVIFGADANFTRNNLITRINSELSNKIGNLLHR
type: DOMAIN
name: Methionyl/Leucyl_tRNA_Synth
description: Methionyl/Leucyl tRNA synthetase

phrase: INSELSNKIGNLLHRIVSFVYNNNDAKVPLIKSGVIDKIYELPILKTAMKFAQENILLMDKIEINKILENIINLAEDANIYIANEAPWNLKKTDYDKMLEVLYTLLEVLRYVAIMLQPFVPSSANKMLDQ
type: DOMAIN
name: Anticodon_Met
description: Methionyl-tRNA synthetase, anticodon-binding domain

phrase: CGKDVMFLTGTDEH
type: DOMAIN
name: MetRS_core
description: Methioninyl-tRNA synthetase core domain

phrase: ELSNKIGNLLH
type: DOMAIN
name: MetRS_core
description: Methioninyl-tRNA synthetase core domain

phrase: ITTPIYYVNDVSH
type: DOMAIN
name: MetRS_core
description: Methioninyl-tRNA synthetase core domain

phrase: QVVGKDILRFHAVYW
type: DOMAIN
name: MetRS_core
description: Methioninyl-tRNA synthetase core domain

phrase: ISNDDFIRTTE
type: DOMAIN
name: MetRS_core
description: Methioninyl-tRNA synthetase core domain

phrase: IYVWLDALVNY
type: DOMAIN
name: MetRS_core
description: Methioninyl-tRNA synthetase core domain

phrase: TYYITTPIYYVNDVSHIGHAYTSVASDVIARFMRCCGKDVMFLTGTDEHGQKVEKAAINKNIDPQSFTDKTSQNFRDLMVAMNISNDDFIRTTENRHKKAVAVFWQKLLDNGAIYEGFYEGWYSVRDEAFYDESEITEDKLAPTGAPVEWVKEPSYFFNLAKWQDKLLEFYELNPDFVRPISRRNEVISFVKSGLKDLSISRTTFNWGIKVPNNEKHVIYVWLDALVNYISALGYPDQQSNYSKFWPANLQVVGKDILRFHAVYWPAFLMAAEISPPKSIMVHGWWTNAGQKISKSLGNTIDPITLIDEFGVDQVRYFLMREVIFGADAN
type: DOMAIN
name: MetRS_core
description: Methioninyl-tRNA synthetase core domain

phrase: LMDKIEINKILENIINLAEDANIYIANEAPWNLKKTDYDKMLEVLYTLLEVLRYVAIMLQPFVPSSANKMLDQLGVAKEERLFKHLVRDHALKAGSNILEPSIIFPK
type: DOMAIN
name: Anticodon_Met
description: Methionyl-tRNA synthetase, anticodon-binding domain
Protein sequence:
MPLLLSGQKFRTDLESFGCLAILSPLEGGAETRLLRRLRASGYQTQVTSARGLGDPVVFLTQLHGIRPPHLGHQNVGRNGALGEVQQVIPQLNELLVEDKPLVLWLLEGQVLSKSELLAINNLCQKEPRIKIVIEMGGARSIKWQPLNEFINKD

Annotated regions:
Protein sequence:
MTKKTLAFASGSAHKWKEMQMLLSPFGYEVVLPKDLGISFSPEETENSFTGNSYIKSKELFRLTGLPSFADDSGISVPALGGEPGVYSARFGGPGLSDKERALYLLQKLGKNPERNAYYSCVVTYVDANTSVSFEGRVDGVISNQYDEEGKYGFGYDPIFVYPPFGKSFSQVPESEKNTVSHRKKAMELFLNWLSNQK

Annotated regions:
Protein sequence:
MAKANTRKTRRKKERKNIEHGCAHIKSTFNNSIVTITDAVGNALSWSSAGALGFKGSRKSTPFAAQMAAETAATAAMEHGLKSIEVYVKGPGAGREAAIRSLQAAGLEITLIKDVTPIPHNGCRPPKRRRV

Annotated regions:
phrase: IRSLQAAGLEITLIKDVTPIPH
type: CONSERVED_SITE
name: Ribosomal_uS11_CS
description: Small ribosomal subunit protein uS11, conserved site
Protein sequence:
MARLRVYELARKLNMSPKELLQELEELGVNVKSHMSYVDEEMANIIIDLLEEDNRKAKQPSKPKKEKGEEEVEKEVVEKKKKKKITLKPDELKLDIIAEKIGVPQNKIIQDMFVKRGIALRPGQILKLEEVEQILKEYKIEIEIEEEQQTSVEEVDEFELLEKRYQELYEKEKDKLVPRPPVVTVMGHVDHGKTTLLDRIRSTRVAEREEGGITQSIGAYQVEVNGKKITFIDTPGHELFTEMRARGAQATDIVVLVVAADDGVMPQTIEAYNHAKAANVPIIVAINKIDKPNANVEKTKQELVEKLGLIPEEWGGDTIVVPISARTGQGVDELLEMILLVAEMNEIKCYPEGPARAVIIESKLDKKMGPVASAIVKDGVLKVGDAVVASNTYGRVRNLFDDNMRPIREAYPSQPVMILGFEDVPDVHSNVYVVESAEKAKEIVEKRLQRLEAQKQSRKHINLEELMKMMQEKEKKVLNLILKADTYGSVAALKNAINKLQSKEIELNIVHAGVGEISTSDVMLAAAVDGVILGFRVKVNNQARRLAEQEGVDVRTYSIIYKLVEDLKLALEGMLEPEEVEEVIGHGEIRKVFKISKVGKVAGVQMLDGKADRNGFVRIYRNGQLVFGGKIESLKHYKEDVSVVEAPQECGIKFAGFDDIHEGDELEFYVIRKVKRKPTFVEEQADQEQK

Annotated regions:
phrase: AQKQSRKHINLEELMKMMQEKEKKVLNLILKADTYGSVAALKNAINKLQSKEIELNIVHAGVGEISTSDVMLAAAVDGVILGFRVKVNNQARRLAEQEGVDVRTYSIIYKLVEDL
type: DOMAIN
name: TIF_IF2_dom3
description: Translation initiation factor IF- 2, domain 3

phrase: PVVTVMGHVDHGKTTLLDRIRSTRVAEREEGGITQSIGAYQVEVNGKKITFIDTPGHELFTEMRARGAQATDIVVLVVAADDGVMPQTIEAYNHAKAANVPIIVAINKIDKPNANVEKTKQELVEKLGLIPEEWGGDTIVVPISARTGQGVDELLEM
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: VTVMGHVDHGKTTLLDRIRSTRVAEREEGGITQSIGAYQVEVNGKKITFIDTPGHELFTEMRARGAQATDIVVLVVAADDGVMPQTIEAYNHAKAANVPIIVAINKIDKPNANVEKTKQELVEKLGLIPEEWGGDTIVVPISARTGQGVDELLEMIL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: PARAVIIESKLDKKMGPVASAIVKDGVLKVGDAVVASNTYGRVRNLFDDNMRPIREAYPSQPVMILGFEDVPDVHSNVYVVESAEKAKEIVEKRL
type: DOMAIN
name: IF2_II
description: Translation initiation factor IF-2, domain II

phrase: MARLRVYELARKLNMSPKELLQELEELGVNVKSHMSYVDEEMANIII
type: DOMAIN
name: IF2_N
description: Translation initiation factor IF-2, N-terminal

phrase: PRPPVVTVMGHVDHGKTTLLDRIRSTRVAEREEGGITQSIGAYQVEVNGKKITFIDTPGHELFTEMRARGAQATDIVVLVVAADDGVMPQTIEAYNHAKAANVPIIVAINKIDKPNANVEKTKQELVEKLGLIPEEWGGDTIVVPISARTGQGVDELLEMILLVAEMN
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: PARAVIIESKLDKKMGPVASAIVKDGVLKVGDAVVASNTYGRVRNLFDDNMRPIREAYPSQPVMILGFEDVPDVHSNV
type: DOMAIN
name: EF-G-like_DII
description: Elongation factor G-like, domain II
Protein sequence:
MTVDFGRVLTAMVSPFDKNMELNLPMARKLARHLVDSGSDGLVVCGTTGESPTLSKEEKLELFRTVVDEVGGRAVVVAGTGSYSTKDSIALTQAAEKLGVDAVMLVCPYYNKPSQDGLYQHFRAVAESTNLPVMIYNIPGRTSINLLPQTCARLAEIGNIVAIKEASGNMDQATELRRLLPDHFHIYSGDDSMTLPLLAVGGKGVVSVAAHLVGGKIQEMINAFTSGNITLAAKLHSSLFPLIKGLFMTTNPVPVKAALGMLGLNVGPPRLPLVEATEQEKEKLRVLLREAQLL

Annotated regions:
phrase: YNIPGRTSINLLPQTCARLAEIGNIVAIKE
type: ACTIVE_SITE
name: Schiff_base-form_aldolases_AS
description: Schiff base-forming aldolase, active site

phrase: GLVVCGTTGESPTLSKE
type: CONSERVED_SITE
name: Schiff_base-form_aldolases_CS
description: Schiff base-forming aldolase, conserved site
Protein sequence:
MPRRRVAAKREVLDDPKYGSQILAKFMNHVMESGKKAVAERIVYGALEKVKERKNSDPLEIFEKALDAIAPLVEVKSRRVGGATYQVPVEVRPSRRNALAMRWLVDFARKRGEKSMALRLAGELMDAAEGKGAAVKKREDVHRMAEANKAFSHYRF

Annotated regions:
phrase: PRRRVAAKREVLDDPKYGSQILAKFMNHVMESGKKAVAERIVYGALEKVKERKNSDPLEIFEKALDAIAPLVEVKSRRVGGATYQVPVEVRPSRRNALAMRWLVDFARKRGEKSMALRLAGELMDAAEGKGAAVKKREDVHRMAEAN
type: DOMAIN
name: Ribosomal_uS7_dom
description: Small ribosomal subunit protein uS7 domain

phrase: SQILAKFMNHVMESGKKAVAERIVYG
type: CONSERVED_SITE
name: Ribosomal_uS7_CS
description: Small ribosomal subunit protein uS7, conserved site
Protein sequence:
MKTQRQAKILELVRERTIETQEELAAALRAEGFEVTQATVSRDIKELSLIKIPGENNTSYYASPGEPMIRRGGEDRLRRLVRLSLSDINSSENLIIIKTPPGEAQGMASAIDHVHWPQIIGTVAGDDTILVIVKPKEATPEVVQRFLELARG

Annotated regions:
phrase: SLSDINSSENLIIIKTPPGEAQGMASAIDHVHWPQIIGTVAGDDTILVIVKPKEATPEVVQRF
type: DOMAIN
name: Arg_repress_C
description: Arginine repressor, C-terminal

phrase: KTQRQAKILELVRERTIETQEELAAALRAEGFEVTQATVSRDIKELSLIKIPGENNTSYYAS
type: DOMAIN
name: Arg_repress_DNA-bd
description: Arginine repressor, DNA-binding domain
Protein sequence:
MQTNLLKPKAINVEPLSAAKGAHRAKVTLEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAGVLHEYSAIDGVQEDVVHVMLNLKGVVFRLHNRDEVTLVLRKEGEGPVKAGDIQTPHDVEIINPDHVITHLSQGGKLDMQIKVEKGRGYVPGTMRRFGDEPTKSIGRIVLDASFSPVRRVSYTVESARVEQRTDLDKLVMEIETNGAITPEEAIRASAKILVEQLAVFAQLEGQINDIFDAQPAQRSTQFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRTETELLKTPNLGRKSLNEIKEVLASRGLTLGGRLENWPPQGLDKR

Annotated regions:
phrase: EPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAGVLHEYSAIDGVQEDVVHVMLNLKGVVFRLHNRDEVTLVLRKEGEGPVKAGDIQTPHDVEIINPDHVITHLSQGGKLDMQIKVEKGRGYVPGTMRRFGDEPTKSIGRIVLDASFSPVRRVSYTVESARVEQRTDLDKLVMEIETNGAITPEEAIRASAKILVEQ
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: PILLRPVDELELTVRSANCLKAENIYYIGDLIQRTETELLKTPNLGRKSLNEIKEVL
type: DOMAIN
name: RNAP_asu_C
description: RNA polymerase, alpha subunit, C-terminal

phrase: RAKVTLEPFERGYGHTLGNALRRVLLSSMVGYAPTEVTIAGVLHEYSAIDGVQEDVVHVMLNLKGVVFRLHNRDEVTLVLRKEGEGPVKAGDIQTPHDVEIINPDHVITHLSQGGKLDMQIKVEKGRGYVPGTMRRFGDEPTKSIGRIVLDASFSPVRRVSYTVESARVEQRTDLDKLVMEIETNGAITPEEAIRASAKILVEQLAVFAQ
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: VTIAGVLHEYSAIDGVQEDVVHVMLNLKGVVFRLHNRDEVTLVLRKEGEGPVKAGDIQTPHDVEIINPDHVITHLSQGGKLDMQIKVEKGRGYVPGTMRRFGDEPTKSIGRIVLDASF
type: DOMAIN
name: DNA-dir_RNA_pol_insert
description: DNA-directed RNA polymerase, insert domain
Protein sequence:
MIHALNGKVESIENGKVYVNVNDLIYEIIVGDTGDFEEYINRNVKIYTKMVVNDDGISLYGFLEVIKLKLFEKLIGVNKLGPKSALKIISSNSVESVVSAIINEDVKALSSLPGIGPKTAERIVLELKDTIKELDVSINEKDRKVLEAIEALVTLGFNRNQAKKAVNKVAAKDDKLDDIIKKALRFLSR

Annotated regions:
phrase: EAIEALVTLGFNRNQAKKAVNKVAAKDDKLDDIIKKALRFL
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal

phrase: MIHALNGKVESIENGKVYVNVNDLIYEIIVGDTGDFEEYINRNVKIYTKMVVNDDGISLY
type: DOMAIN
name: DNA_helicase_Holl-junc_RuvA_I
description: DNA helicase, Holliday junction RuvA type, domain I, bacterial

phrase: EAIEALVTLGFNRNQAKKAVNKVAAKDDKLDDIIKKAL
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal

phrase: EKLIGVNKLGPKSALKIIS
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: KALSSLPGIGPKTAERIVL
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1
Protein sequence:
MSWQAYVDDHLLCDIEGNHLTHAAIIGQDGSVWAQSTDFPQFKPEEITAIMNDFNEPGSLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTGAALIIGIYDEPMTPGQCNMVVERPGDYLIDQGY

Annotated regions:
phrase: MSWQAYV
type: CONSERVED_SITE
name: Profilin_CS
description: Profilin conserved site
Protein sequence:
MLIFKICFYRLLPLSVLLLAACSALKAPESSSVLKNHIASDEWQEYQHQLKQIQQFQIQGSVAYFSDEKKAYARFFWQQYSPKNYHLLLLSPLGQTEFELKVTNGRVDMAKYKDQGEIKGDAEEILFKLTGIPIPLEHLSRWIVGASSDADEIILNRQSRLKTLIHHKKEQTWKVYYQAYNTKITPILPERLELYLISPNHQDQRMTLKINHWILK

Annotated regions:
Protein sequence:
MQTLQTTSLRVSENQLFILDQQALPQEKRWLAADNVALLVDHIHALRVRGAPLIGLSASLLLALLAQRGLNRDALQQALETLRAARPTAVNLMNNLDRMKQALAREDYPQALEAEALRLVEEDKQLCDRIAEAGSALVKPGSRLLTHCNTGGLATAGVGTALGVIALAHRQGKVANVWVDETRPLLQGGRLTAWELGELGVPYQLITDSMAASLMAQGQVDAVWVGADRIAANGDVANKIGTYSLAVLAHYHQIPFYVAAPQTTLDRYCPNGAAIPIEQRAAAEVTGVAGSFGAVQWAPMGAAVYNPAFDVTPAGLVSGWVLDSGVVTPAQVAAGAFAPDNG

Annotated regions:
Protein sequence:
MAKTVALVVAAGRGRRFGGDIPKQYQSLNGRPILRHSLARLAADPSIAAIRVVIHPDDRELYDEAARGLALLEPVHGGETRQDSVRLGLESLASLSPDKVLIHDGARPFVDEALVGRVIAALDRHDGAIPAVAVADTLKKGADGLVQTTIDRQGLWRAQTPQGFRFGPILQAHLAVAGNELTDDSSVAEHAGLRVALVTGAEGNFKITTNDDLARAQAAFAGPGYTCVGNGFDVHRFAPGTGVWLCGILVPHDFSLEGHSDADVALHALTDAILGAVGAGDIGAHFPPTDPRWKGASSDRFLTHAANLVQGLGGKIQHVDVTVICERPKVGPHRPAMRLKLGEILGLPLSRVSVKATTTEGLGFTGRREGIAAQASATVWMPA

Annotated regions:
phrase: VLIHDGA
type: CONSERVED_SITE
name: ISPD_synthase_CS
description: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site

phrase: SDADVALHALTDAIL
type: CONSERVED_SITE
name: MECDP_synthase_CS
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site

phrase: VGNGFDVHRFAPGTGVWLCGILVPHDFSLEGHSDADVALHALTDAILGAVGAGDIGAHFPPTDPRWKGASSDRFLTHAANLVQGLGGKIQHVDVTVICERPKVGPHRPAMRLKLGEILGLPLSRVSVKATTTEGLGFTGRREGIAAQASAT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: TCVGNGFDVHRFAPGTGVWLCGILVPHDFSLEGHSDADVALHALTDAILGAVGAGDIGAHFPPTDPRWKGASSDRFLTHAANLVQGLGGKIQHVDVTVICERPKVGPHRPAMRLKLGEILGLPLSRVSVKATTTEGLGFTGRREGIAAQASATVW
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: VGNGFDVHRFAPGTGVWLCGILVPHDFSLEGHSDADVALHALTDAILGAVGAGDIGAHFPPTDPRWKGASSDRFLTHAANLVQGLGGKIQHVDVTVICERPKVGPHRPAMRLKLGEILGLPLSRVSVKATTTEGLGFTGRREGIAAQASAT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: ARAQAAFAGPGYTCVGNGFDVHRFAPGTGVWLCGILVPHDFSLEGHSDADVALHALTDAILGAVGAGDIGAHFPPTDPRWKGASSDRFLTHAANLVQGLGGKIQHVDVTVICERPKVGPHRPAMRLKLGEILGLPLSRVSVKATTTEGLGFTGRREGIAAQASAT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: VGNGFDVHRFAPGTGVWLCGILVPHDFSLEGHSDADVALHALTDAILGAVGAGDIGAHFPPTDPRWKGASSDRFLTHAANLVQGLGGKIQHVDVTVICERPKVGPHRPAMRLKLGEILGLPLSRVSVKATTTEGLGFTGRREGIAAQASAT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Protein sequence:
MFRYLTAGESHGPQLTAIIEGIPAGLSLSEEQINIDLARRQCGYGRGGRMLIEKDQVEILSGVRWGKTIGSPITLCVRNRDWENWHEKMSPHERFHDDKIRVTRSRPGHADLPGAMKYNHHDVRNILERSSARETAVRVAVGAVAKALLSQFEIEVCGFVAELGGIKAIRPSLPLAALKDMAAKSELFTYDKSVEEEMKRLIDTVRDEGDTVGGVIEVNAVGVPPGLGSHVQWDRKLDARLAMAVLSIQAFKGVEIGIGFQAAASTGSKVHDEIFYDSARIAHGEQSGFYRKSNNAGGIEGGISNGEEIVVRAAMKPIPTLYKPLRSVDIVSKEPYEATVERSDVCAVPAASVVAEAVVAIELADAFMVKFGGDSITEIKRNYQSYLDYLRAF

Annotated regions:
phrase: RSDVCAVPAASVVAEA
type: CONSERVED_SITE
name: Chorismate_synthase_CS
description: Chorismate synthase, conserved site

phrase: ERSSARETAVRVAVGA
type: CONSERVED_SITE
name: Chorismate_synthase_CS
description: Chorismate synthase, conserved site

phrase: GESHGPQLTAIIEGI
type: CONSERVED_SITE
name: Chorismate_synthase_CS
description: Chorismate synthase, conserved site
Protein sequence:
MQVQKSFKDKKTSGTLYLVPTPIGNLQDMTFRAVATLKEVDFICAEDTRNTGLLLKHFDIATKQISFHEHNSYEKIPDLIDLLISGRSLAQVSDAGMPSISDPGHDLVKAAIDSDIAVVALPGASAGITALIASGLAPQPHVFYGFLPRKAGQQKAFFEDKHHYTETQMFCESPYRIKDTLTNMLACYGDRQVVLVRELTKLFEEYQRGSISEILSYLEETPLKGECLLIVAGAQVDSEIELTADVDLVSLVQKEIQAGAKPNQAIKTIAKAYQVNRQELYQQFHDL

Annotated regions:
phrase: TLYLVPTPIGNLQDMTFRAVATLKEVDFICAEDTRNTGLLLKHFDIATKQISFHEHNSYEKIPDLIDLLISGRSLAQVSDAGMPSISDPGHDLVKAAIDSDIAVVALPGASAGITALIASGLAPQPHVFYGFLPRKAGQQKAFFEDKHHYTETQMFCESPYRIKDTLTNMLACYGDRQVVLVRELTKLFEEYQRGSISE
type: DOMAIN
name: 4pyrrol_Mease
description: Tetrapyrrole methylase

phrase: SDAGMPSISDP
type: CONSERVED_SITE
name: SAM_MeTrfase_RsmI_CS
description: SAM-dependent methyltransferase RsmI, conserved site
Protein sequence:
MAISAAIGTPLETCLAQAVDANPALKDAAAVVAAVGRSAVEISERIGRGALGGDLAAAGDHNSDGDVQKALDVIAHESVTAALRGAPVAEVASEEAEEVMRLNPDAPLAVAIDPLDGSSNIGVNMAVGMIFGIRPSIKDPANPLASFTTPGSTQIAAGFVTYGPATALILTLGEGTQSYVLDRTEGRFKLTSPAMSVPPSTKEFAINASNARHWDAPVKAYIEDCQRGTEGPRDKDYNMRWLASLVADIQRVLTRGGVFLYPGDARKNYARGRLRLLYEVAPVAMLVEQAGGAATDGQTRILDIVANGIHERAPLVCGSTEEVTCVATYYAGGKPDAGRSPLFGQRGLMRS

Annotated regions:
phrase: ALKDAAAVVAAVGRSAVEISERIGRGALGGDLAAAGDHNSDGDVQKALDVIAHESVTAALRGAPVAEVASEEAEEVMRLNPDAPLAVAIDPLDGSSNIGVNMAVGMIFGIRPSIKDPANPLASFTTPGSTQIAAGFVTYGPATALILTLGEGTQSYVLDRTEGRFKLT
type: DOMAIN
name: FBPase_N
description: Fructose-1-6-bisphosphatase class I, N-terminal

phrase: GRLRLLYEVAPV
type: ACTIVE_SITE
name: Fructose_bisphosphatase_AS
description: Fructose-1,6-bisphosphatase, active site

phrase: VPPSTKEFAINASNARHWDAPVKAYIEDCQRGTEGPRDKDYNMRWLASLVADIQRVLTRGGVFLYPGDARKNYARGRLRLLYEVAPVAMLVEQAGGAATDGQTRILDIVANGIHERAPLVCGSTEEVTCVATY
type: DOMAIN
name: FBPase_C_dom
description: Fructose-1-6-bisphosphatase class 1, C-terminal
Protein sequence:
MDLVLKRCLLHLAVIGALLAVGATKVPRNQDWLGVSRQLRTKAWNRQLYPEWTEAQRLDCWRGGQVSLKVSNDGPTLIGANASFSIALNFPGSQKVLPDGQVIWVNNTIINGSQVWGGQPVYPQETDDACIFPDGGPCPSGSWSQKRSFVYVWKTWGQYWQVLGGPVSGLSIGTGRAMLGTHTMEVTVYHRRGSRSYVPLAHSSSAFTITDQVPFSVSVSQLRALDGGNKHFLRNQPLTFALQLHDPSGYLAEADLSYTWDFGDSSGTLISRALVVTHTYLEPGPVTAQVVLQAAIPLTSCGSSPVPGTTDGHRPTAEAPNTTAGQVPTTEVVGTTPGQAPTAEPSGTTSVQVPTTEVISTAPVQMPTAESTGMTPEKVPVSEVMGTTLAEMSTPEATGMTPAEVSIVVLSGTTAAQVTTTEWVETTARELPIPEPEGPDASSIMSTESITGSLGPLLDGTATLRLVKRQVPLDCVLYRYGSFSVTLDIVQGIESAEILQAVPSGEGDAFELTVSCQGGLPKEACMEISSPGCQPPAQRLCQPVLPSPACQLVLHQILKGGSGTYCLNVSLADTNSLAVVSTQLIMPGQEAGLGQVPLIVGILLVLMAVVLASLIYRRRLMKQDFSVPQLPHSSSHWLRLPRIFCSCPIGENSPLLSGQQV

Annotated regions:
phrase: DLSYTWDFGDSSGTLISRALVVTHTYLEPGPVTAQVV
type: DOMAIN
name: PKD_dom
description: PKD domain

phrase: FLRNQPLTFALQLHDPSGYLAEADLSYTWDFGDSSGTLISRALVVTHTYLEPGPVTAQVVLQAAIP
type: DOMAIN
name: PKD_dom
description: PKD domain

phrase: NKHFLRNQPLTFALQLHDPSGYLAEADLSYTWDFGDSSGTLISRALVVTHTYLEPGPVTAQVVLQAAIPLTSCGSSPVPGTT
type: DOMAIN
name: PKD/Chitinase_dom
description: PKD/Chitinase domain

phrase: SCQGGLPKEACMEISSPGCQPPAQRLCQPVLPSPACQLVLHQILKGGSGTY
type: DOMAIN
name: PKAT_KLD
description: PKAT, KLD domain
Protein sequence:
MTKYIFVTGGVVSSLGKGITAASLGRLLKNRGLKVTIQKFDPYINVDPGTMSPYQHGEVFVTEDGAETDLDLGHYERFIDINLGQYSNVTTGRVYSSVIQKERRGDYLGGTVQVIPHITNEIKERVFRSGRESNADVVITEIGGTVGDIESLPFLEAIRQIKSDIGRENVMYLHCTLVPYIKAAGELKTKPTQHSVKELRSLGIQPDAIVLRTEMPIPDGMKAKIAQFCDVNEQAVFEAGDAETLYDVPLMLQNQELDQFTCNHFGLSCGEADMSEWNELVTRVKNLSKVTTIGLVGKYVELPDAYISVVEALKHAGYSFDTDIEIKWVNSEEVTRENAAQYLSDVDGILVPGGFGDRGIEGKIEAIRYAREEKVPFLGICLGMQLATVEFARNVLGLDGAHSAEIEPTTPYPIIDLLPEQKDVEDMGGTLRLGVYPSRVIEGTKTKAAYGEEVIYERHRHRYEFNNQYRDQMEEAGFLFSGTSPDGRLVEIIELSDHPWFVASQFHPEFKSRPTRPQPLFHDFIGASVQK

Annotated regions:
phrase: TIGLVGKYVELPDAYISVVEALKHAGYSFDTDIEIKWVNSEEVTRENAAQYLSDVDGILVPGGFGDRGIEGKIEAIRYAREEKVPFLGICLGMQLATVEFARNVLGLDGAHSAEIEPTTPYPIIDLLPEQKDVEDMGGTLRLGVYPSRVIEGTKTKAAYGEEVIYERHRHRYEFNNQYRDQMEEAGFLFSGTSPDGRLVEIIELSDHPWFVASQFHPEFKSRPTRPQPLFHDF
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain

phrase: KYIFVTGGVVSSLGKGITAASLGRLLKNRGLKVTIQKFDPYINVDPGTMSPYQHGEVFVTEDGAETDLDLGHYERFIDINLGQYSNVTTGRVYSSVIQKERRGDYLGGTVQVIPHITNEIKERVFRSGRESNADVVITEIGGTVGDIESLPFLEAIRQIKSDIGRENVMYLHCTLVPYIKAAGELKTKPTQHSVKELRSLGIQPDAIVLRTEMPIPDGMKAKIAQFCDVNEQAVFEAGDAETLYDVPLMLQNQELDQFT
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: KYIFVTGGVVSSLGKGITAASLGRLLKNRGLKVTIQKFDPYINVDPGTMSPYQHGEVFVTEDGAETDLDLGHYERFIDINLGQYSNVTTGRVYSSVIQKERRGDYLGGTVQVIPHITNEIKERVFRSGRESNADVVITEIGGTVGDIESLPFLEAIRQIKSDIGRENVMYLHCTLVPYIKAAGELKTKPTQHSVKELRSLGIQPDAIVLRTEMPIPDGMKAKIAQFCDVNEQAVFEAGDAETLYDVPLMLQNQELDQFTCNHFG
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: LPDAYISVVEALKHAGYSFDTDIEIKWVNSEEVTRENAAQYLSDVDGILVPGGFGDRGIEGKIEAIRYAREEKVPFLGICLGMQLATVEFARNVLGLDGAHSAEIEPTTPYPIIDLLPEQKDVEDMGGTLRLGVYPSRVIEGTKTKAAYGEEVIYERHRHRYEFNNQYRDQMEEAGFLFSGTSPDGRLVEIIELSDHPWFVASQFHPEFKSRPTRPQPLFHDF
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase