Protein sequence:
MGARASILSGGKLDDWEKIRLRPGGKKKYRIKHLVWASRELDRFALNPGLLESAKGCQQILVQLQPALQTGTQEIKSLYNTVATLYCVHQRIEIKDTMEALEKIEEIQNKNKQQAQKAETDKKDNSQVSQNYPIVQNLQGQPVHQALSPRTLNAWVKVIEEKAFSPEVIPMFSALSEGATPQDLNTMLNTIGGHQAAMQMLKDTINEEAAEWDRVHPVHAGPIAPGQVREPRGSDIAGTTSTLQEQIGWMTGNPPIPVGEIYKRWIILGLNKIVRMYSPVSILDIRQGPKEPFRDYVDRFFKALRAEQATQDVKNWMTDTLLVQNANPDCKTILKALGSGATLEEMMTACQGVGGPGHKARVLAEAMSQVTNTNIMMQRGNFRDHKRIVKCFNCGKQGHIAKNCRAPRKKGCWKCGKEGHQMKDCTERQANFFREDLAFQQREARELSPEQTRANSPTSREPRARRGDPLPETGAEGQGTVSSNFPQITLWQRPLVTIRIGGQLREALLDTGADDTVLEDIDLPRKWKPKMIGGIGGFIKVRQYNEVPIEIEGKKAIGTVLIGPTPVNIIGRNMLTQLGCTLNFPISPIETVPVKLKPGMDGPKIKQWPLTEEKIKALTQICAEMEEEGKISRVGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLYEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILKPFRERNPEIVIYQYMDDLYVGSDLEIEQHRRKIKELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPEKEDWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLKGAKALTDIVPLTREAELELAENKEILKEPVHGVYYDSAKELIAEVQKQGLDQWTYQIYQEPFKNLKTGKYAKRRSAHTNDVKQLAEVVQKIALEAIVIWGKTPKFRLPIQRETWETWWTDYWQATWIPEWEFVNTPPLVKLWYQLEKEPIMGAETFYVDGASNRETKTGKAGYVTDKGRQKVVTLTDTTNQKTELHAIYLALRDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEELIKKEKVYLSWVPAHKGIGGNEQVDKLVSSGIRKVLFLDGIDKAQEDHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQEAAFFILKLAGRWPVKVIHTDNGSNFTSGAVKAACWWADIKQEFGIPYNPQSQGVVESMNKELKKIIGQVREQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDIIATDIQTRELQKQITKIQNFRVYYRDSRDPIWKGPAKLPWKGEGAVVIQDNSEIKVVPRRKAKIIRDYGKQMAGDDCVAGRQDED

Annotated regions:
phrase: EGKISRVGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLYEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILKPFRERNPEIVIYQYMDDLYVGSDLEIEQHRRKIKELREHLLKWGFTTPDKKHQKEPPFLWMGYE
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: YYDSAKELIAEVQKQGLDQWTYQIYQEPFKNLKTGKYAKRRSAHTNDVKQLAEVVQKIALEAIVIWGKTPKFRLPIQRETWETWWTDYWQATWIPEWEFVN
type: DOMAIN
name: RVT_connect
description: Reverse transcriptase connection

phrase: GCWKCGKEGHQMKDCT
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: KCFNCGKQGHIAKNC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: GCWKCGKEGHQMKDCT
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: KCFNCGKQGHIAKNCR
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: GARASILSGGKLDDWEKIRLRPGGKKKYRIKHLVWASRELDRFALNPGLLESAKGCQQILVQLQPALQTGTQEIKSLYNTVATLYCVHQRIEIKDTMEALEKIEEIQNKNKQQAQKAETDKKDNSQVSQ
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: WQRPLVTIRIGGQLREALLDTGADDTVLEDIDLPRKWKPKMIGGIGGFIKVRQYNEVPIEIEGKKAIGTVLIGPTPVNIIGRNMLTQLGCT
type: DOMAIN
name: Retropepsins
description: Retropepsins

phrase: REALLDTGADDTVLEDIDLPRKWKPKMIGGIGGFIKVRQYNEVPIEIEGKKAIGTVLIGPTPVNIIGRN
type: DOMAIN
name: Peptidase_A2_cat
description: Peptidase A2A, retrovirus, catalytic

phrase: RASILSGGKLDDWEKI
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: RPGGKKKYRIKHLVWASR
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: DRFALNPGLLESAKG
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: TGTQEIKSLYNTVATLYCV
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: HQRIEIKDTMEAL
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: IMGAETFYVDGASNRETKTGKAGYVTDKGRQKVVTLTDTTNQKTELHAIYLALRDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEELIKKEKVYLSWVPAHKGIGGNEQVDKLVSSGI
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: IKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLYEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQCSMTKILKPFRERNPEIVIYQYMDDLYVGSDLEIEQHRRKIKELREHLLKWGFTTPDKKHQKEPPFLWMGYE
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: FRVYYRDSRDPIWKGPAKLPWKGEGAVVIQDNSEIKVVPRRKAKIIR
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: CWKCGKEGHQMKDCT
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: SPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQEAAFFILKLAGRWPVKVIHTDNGSNFTSGAVKAACWWADIKQEFGIPYN
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: ALLDTGADDTV
type: ACTIVE_SITE
name: Aspartic_peptidase_AS
description: Aspartic peptidase, active site

phrase: KCFNCGKQGHIAKNC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: VDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQEAAFFILKLAGRWPVKVIHTDNGSNFTSGAVKAACWWADIKQEFGIPYNPQSQGVVESMNKELKKIIGQVREQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIIDI
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: VQPIQLPEKEDWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLKGAKALTDIVPLTREAELE
type: DOMAIN
name: RVT_thumb
description: Reverse transcriptase thumb

phrase: VYYRDSRDPIWKGPAKLPWKGEGAVVIQDNSEIKVVPRRKAKI
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: YSPVSILDIRQGPKEPFRDYVDRFFKALRAEQATQDVKNWMTDTLLVQNANPDCKTILKALGSGATLEEMMT
type: DOMAIN
name: Gag_p24_C
description: Retroviral nucleocapsid Gag protein p24, C-terminal domain

phrase: VTIRIGGQLREALLDTGADDTVLEDIDLPRKWKPKMIGGIGGFIKVRQYNEVPIEIEGKKAIGTVLIGPTPVNIIGRNML
type: DOMAIN
name: Retropepsin-like_cat_dom
description: Retropepsin-like catalytic domain

phrase: DGIDKAQEDHEKYHSNWRAMASDFNLPPVVAKEIVASCDKC
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: AQEDHEKYHSNWRAMASDFNLPPVVAKEIVASCDKC
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: AETFYVDGASNRETKTGKAGYVTDKGRQKVVTLTDTTNQKTELHAIYLALRDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEELIKKEKVYLSWVPAHKGIGGNEQVDKLVSSG
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain