nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MKDSALIELFLNEIWIEKQLSQNTIASYRLDLTALIQWLEKQQLTLINLDAIDLQTFLGERLNQGYKATSTARLLSAMRKLFQYLYREKYRTDDPSAVLSSPKLPSRLPKYLTEQQVTDLLNSPDVDIPLELRDKAMMELLYATGLRVTELVSLTIENININQGIVRVVGKGNKERIVPIGEEATYWIRQFMLYGRPFLLHGQSSDVVFPSKRALQMTRQTFWHRIKHYALLSDIDINSLSPHVLRHAFATHLVNHGADLRVVQMLLGHSDLSTTQIYTHVAKERLKHLHERYHPRG

Annotated regions:
phrase: MKDSALIELFLNEIWIEKQLSQNTIASYRLDLTALIQWLEKQQLTLINLDAIDLQTFLGERLNQGYKATSTARLLSAMRKLFQYL
type: DOMAIN
name: CB
description: Core-binding (CB) domain

phrase: IELFLNEIWIEKQLSQNTIASYRLDLTALIQWLEKQQLTLINLDAIDLQTFLGERLNQGYKATSTARLLSAMRKLFQYLYRE
type: DOMAIN
name: Integrase_SAM-like_N
description: Integrase, SAM-like, N-terminal

phrase: KYLTEQQVTDLLNSPDVDIPLELRDKAMMELLYATGLRVTELVSLTIENININQGIVRVVGKGNKERIVPIGEEATYWIRQFMLYGRPFLLHGQSSDVVFPSKRALQMTRQTFWHRIKHYALLSDIDINSLSPHVLRHAFATHLVNHGADLRVVQMLLGHSDLSTTQIYTHVAK
type: DOMAIN
name: Integrase_catalytic
description: Integrase, catalytic domain

phrase: RLPKYLTEQQVTDLLNSPDVDIPLELRDKAMMELLYATGLRVTELVSLTIENININQGIVRVVGKGNKERIVPIGEEATYWIRQFMLYGRPFLLHGQSSDVVFPSKRALQMTRQTFWHRIKHYALLSDIDINSLSPHVLRHAFATHLVNHGADLRVVQMLLGHSDLSTTQIYTHVAKERLKHLH
type: DOMAIN
name: Integrase_catalytic
description: Integrase, catalytic domain
Protein sequence:
MATVLFVKANNRPAEQAVSVKLYEAFLANYKEAHPNDTVVELDLYKEELPYVGVDMINGTFKAGKGFDLTEEEAKAVAVADKYLNQFLEADKVVFGFPLWNLTIPAVLHTYIDYLNRAGKTFKYTPEGPVGLIGDKKIALLNARGGVYSEGPAAEVEMAVKYVASMMGFFGATNMETVVIEGHNQFPDKAEEIIAAGLEEAAKVASKF

Annotated regions:
phrase: TVLFVKANNRPAEQAVSVKLYEAFLANYKEAHPNDTVVELDLYKEELPYVGVDMINGTFKAGKGFDLTEEEAKAVAVADKYLNQFLEADKVVFGFPLWNLTIPAVLHTYIDYLNRAGKTFKYTPEGPVGLIGDKKIALLNARGGVYSEGPAAEVEMAVKYVASMMGFFGATNMETVVIEGHNQFPDKAEEIIAAGLEEAA
type: DOMAIN
name: Flavodoxin_fold
description: Flavodoxin-like fold
Protein sequence:
MKFALLSGVAAGLLPVVSAVSVSGAAEGFAKGVTGGGSAAAVYPTTTDELVSYLGDSSPRVIVLDRTFDFTGTEGTTTATGCAPWGTAAACQLAINQNDWCTNYQPDAPSVSVTYDNAGILGITVASDKTILGSGSSGVIKGKGLRIVSGASNIIIQNIAITDLNPKYVWGGDAITLNDADMVWIDHVTTARIGRQHLVLGNDADNRVTVSNSYFNGVSDYSATCDGYAYWGIYFAGSSDLITFKGNYIHHFSGRSPKVQENTLLHAVNNYWYDSTGHAFEIGAGGYVLAEGNVFQNIDTPVQSPIEGQLFTSPDTNTNTVCATYLGRNCEVNGFGSSGTFSQADTAFLVNFEGKNIASASPYADAQSSVPSSAGQGNL

Annotated regions:
phrase: ITVASDKTILGSGSSGVIKGKGLRIVSGASNIIIQNIAITDLNPKYVWGGDAITLNDADMVWIDHVTTARIGRQHLVLGNDADNRVTVSNSYFNGVSDYSATCDGYAYWGIYFAGSSDLITFKGNYIHHFSGRSPKVQENTLLHAVNNYWYDSTGHAFEIGAGGYVLAEGNV
type: DOMAIN
name: Pec_lyase
description: Pectate lyase

phrase: AINQNDWCTNYQPDAPSVSVTYDNAGILGITVASDKTILGSGSSGVIKGKGLRIVSGASNIIIQNIAITDLNPKYVWGGDAITLNDADMVWIDHVTTARIGRQHLVLGNDADNRVTVSNSYFNGVSDYSATCDGYAYWGIYFAGSSDLITFKGNYIHHFSGRSPKVQENTLLHAVNNYWYDSTGHAFEIGAGGYVLAEGNVFQNIDT
type: DOMAIN
name: Pec_lyase
description: Pectate lyase
Protein sequence:
MAVRKLKPTSPGRRFQTVSSFEEITRSTPERSLTEGLTKKSGRNCYGRVTSRRRGGGHKRLYRIIDFRRDKVGVPAKVAHVEYDPNRSARIALLHYSDGEKRYILAPLGVKQGDVVVAGDSVDIKPGNAMALSRVPVGTIVHNIELYPGKGGQFCRAAGTYAQLVAKEGNYALLRMPSGEVRKVLVTCCATIGQVGNLDHEKISYGKAGRSRWLGRRPKVRGVAMNPIDHPLGGGEGRSSGGRHPVTPWGIPTKGFKTRDKKKASSKLIIKRRGQK

Annotated regions:
phrase: KPGNAMALSRVPVGTIVHNIELYPGKGGQFCRAAGTYAQLVAKEGNYALLRMPSGEVRKVLVTCCATIGQVGNLDHEKISYGKAGRSRWLGRRPKVRGVAMNPIDHPLGGGEGRSSGGRHPVTPW
type: DOMAIN
name: Ribosomal_uL2_C
description: Large ribosomal subunit protein uL2, C-terminal

phrase: GRNCYGRVTSRRRGGGHKRLYRIIDFRRDKVGVPAKVAHVEYDPNRSARIALLHYSDGEKRYILAPLGVKQGDVV
type: DOMAIN
name: Ribosomal_uL2_RNA-bd_dom
description: Large ribosomal subunit protein uL2, RNA-binding domain

phrase: PKVRGVAMNPI
type: CONSERVED_SITE
name: Ribosomal_uL2_CS
description: Large ribosomal subunit protein uL2, conserved site

phrase: IKPGNAMALSRVPVGTIVHNIELYPGKGGQFCRAAGTYAQLVAKEGNYALLRMPSGEVRKVLVTCCATIGQVGNLDHEKISYGKAGRSRWLGRRPKVRGVAMNPIDHPLGGGEGRSSGGRHPVTPWGI
type: DOMAIN
name: Ribosomal_uL2_C
description: Large ribosomal subunit protein uL2, C-terminal
Protein sequence:
MSPRKTYILKLYVAGNTPNSMRALTTLREILQTDFKGVYALKVIDVLKNPQLAEEDKILATPTLAKILPPPVRRIIGDLSDRERVLIGLDLLFEELSESDFFSGSPDSEFSSDEGKS

Annotated regions:
phrase: TYILKLYVAGNTPNSMRALTTLREILQTDFKGVYALKVIDVLKNPQLAEEDKILATPTLAKILPPPVRRII
type: DOMAIN
name: KaiB_domain
description: KaiB domain

phrase: KLYVAGNTPNSMRALTTLREILQTDFKGVYALKVIDVLKNPQLAEEDKILATPTLAKILPPPVRRIIGDLSDRERVLIGL
type: DOMAIN
name: KaiB_domain
description: KaiB domain

phrase: KLYVAGNTPNSMRALTTLREILQTDFKGVYALKVIDVLKNPQLAEEDKILATPTLAKILPPPVRRIIGDLSDRERVLIGLD
type: DOMAIN
name: KaiB_domain
description: KaiB domain
Protein sequence:
MADLNKLAEDIVGLTLLEAQELKTILKDKYGIEPAAGGAVMMAGPAAGAAAPAEEEKTEFDVGLTDAGANKINVIKEVRAITGLGLKEAKDLVEAGGKVKEAVAKADAEAMKKKLEEAGAKVELK

Annotated regions:
phrase: NKLAEDIVGLTLLEAQELKTILKDKYGIEPAAGGAVMMAGPAAGAA
type: DOMAIN
name: Ribosomal_bL12_oligo
description: Large ribosomal subunit protein bL12, oligomerization

phrase: FDVGLTDAGANKINVIKEVRAITGLGLKEAKDLVEAGGKVKEAVAKADAEAMKKKLEEAGAKVEL
type: DOMAIN
name: Ribosomal_bL12_C
description: Large ribosomal subunit protein bL12, C-terminal
Protein sequence:
MNGSTSSDAVDPGLCVTTPSPVKQTLTLGSDTFNKDDKQITPSIRRSNSTRSKGINFNVAISPLATGQTPPSSKGGHRKTASYDAKNLHLPQLAESSPSSTIPDSPIPTASEELKYDLPLPSTEQLMGLDIDDQLRLLALKEMSIVEIKDSIGNLTSKLQRNENELHSLREVIQRSLYKELNSSSSKSKKETSSNGFVTRPQRQNSNPREEAIASTKNRSRRRTLSSSSSGVPPVLSSQQLSQNTDKQSRRDSTLWSNLSKPLNLIQQFDSMLQHEFEKSMIPQKNQEGSDKTMDSHKSRHSEDSTSSLGSISSPLNSKSKSVTGKQSNDELDRYFAQQSTSGASKDKPDGVVPTESHMNSDDMIQAVSSSIWSFVNDVKTNVLSSLADEDVPESRSHVTKGPSGFSNSNDQKEINDLTVYNLDTGSTVSLDKNEDSDLDYTFVHNTANEDRAAVDHDKSKND

Annotated regions:
Protein sequence:
MEVEDSSRAYGLVAANYFGNPADQLTLIGVTGTNGKTTVAYLLESVLLEAGYKVGVIGTVNNRYSGDNGKSVILETRFTTPEAMVLQKVLREMADNGVSFVIMEVSSHALSQKRISNIRFRTAAFTNLSRDHLDYHKDMKEYFEAKLSLFREHLEDEGIAVLPGKSWVEREADLYGELVRTCEDNCGKNVYWGDGEKDDVRLIGFRTRLEETLMDLILAGNPVKLKSKLVGGFNMDNVLTTCGLCHALEIDPDSVRRGLMKSTGAPGRLERVMDRAEDPLDGPVVLVDYAHTPDALEHVLETVAALPHGELFCVFGCGGDRDNGKRPLMGEIACRFSDVVLITDDNPRTEDPELIVKQILEGTEESGLEPREQAWLGERQRGDRGIVVERDRRKAIRLAITSAGPEDVVLIAGKGHETYQLSLRGRQFFDDRLEAENILSSWTPLRVARGARGKLRSAGVRPGLLGPVSTDSRQMPENGIFVALKGEHFDGHRFVDQVLEKKCGCLVLEKGAPVPEPTVVPVIRVEDTARALGDLAAYRRRQVSRLCEQTVIGITGSCGKTTVKEMVSAILKRKWPAGPNHTENSVLKTKGNFNNLIGLPLSLLPLDLNHRAAVLEMGMNQPGELRRLVEIADPDISCIINVHGAHLEKLGSLEGVARAKEELFAGTRSDGILVVNLDDPLVRKLSAKYGQRKIGFSVSGQVAGAQPDLWTSDINLEDKGVITFTLHCGTEQEDIHLYTLGEHNVGNSLAAAAIAKAAGAGLSEIAAG

Annotated regions:
phrase: VTGTNGKTTVAYLLESVLLEAGYKVGVIGTVNNRYSGDNGKSVILETRFTTPEAMVLQKVLREMADNGVSFVIMEVSSHALSQKRISNIRFRTAAFTNLSRDHLDYHKDMKEYFEAKLSLFREHLEDEGIAVLPGKSWVEREADLYGELVRTCEDNCGKNVYWGDGEKDDVRLIGFRTRLEETLMDLILAGNPVKLKSKLVGGFNMDNVLTTCG
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: ITGSCGKTTVKEMVSAILKRKWPAGPNHTENSVLKTKGNFNNLIGLPLSLLPLDLNHRAAVLEMGMNQPGELRRLVEIADPDISCIINVHGAHLEKLGSLEGVARAKEELFAGTRSDGILVVNLDDPLVRKLSAKYGQRKIGFSVSGQVAGAQPDLWTSDINLEDKGVITFTLHCGTEQEDIHLYTLGEHNVGNSLAAAAI
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRLERVMDRAEDPLDGPVVLVDYAHTPDALEHVLETVAALPHGELFCVFGCGGDRDNGKRPLMGEIACRFSDVVLITDDNPRTEDPELIVKQILEGTEESGLEPREQAWLGERQRGDRGIVVERDRRKAIRLAITSAGPEDVVLIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: IGVTGTNGKTTVAYLLESVLLEA
type: CONSERVED_SITE
name: Folylpolyglutamate_synth_CS
description: Folylpolyglutamate synthetase, conserved site

phrase: VSTDSRQMPENGIFVALKGEHFDGHRFVDQVLEKKCGCLVLEKGAPVPEPTVVPVIRVEDTARALGDLAAY
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain
Protein sequence:
MITSSQSALSGEMLMAMLPILIVAGTVVLLMLSIAWRRHHFFNGSLTVIGLNCALFSLYTVWGLFHFSQHDAINVTPLLRINGYSIFYSGLVILASLATCTFAYPWLQGYPDNREEFYLLLLISTLGALVLVSAQHLAAVFLGIELIALPLFGLLGYAYQQNRSLEASIKYFVLSAAASSFLLFGMAMLYAQTGGLSFTSLGNVFNEHVFSKPLILAGMGMILVGFGFKLSLVPFQLWTPDVYQGAPAPVTTFLGTVGKIALLAGVMRFFLYVPTFNVPGLNTALSFMAVASIFFGNLMALTQNNIKRLLGYSSIAHFGYLMIGLIALHQDPMVLERVAVYIVAYLFSSLGVLGVVSLMSSPYKGADAEALFSYRGLFWHRPILAAVMTIMLLSLAGIPMTLGFIAKFFLLLTAVNTHLWVLTATVVIGSAIALYYYLRITVSLFLSPPETLQRDTPKDWAFTAGGIVVWISALLVLVFGIYPQPLISFIKGFNALS

Annotated regions:
phrase: AQHLAAVFLGIELIALPLFGLLGYAYQQNRSLEASIKYFVLSAAASSFLLFGMAMLYAQTGGLSFTSLGNVFNEHVFSKPLILAGMGMILVGFGFKLSLVPFQLWTPDVYQGAPAPVTTFLGTVGKIALLAGVMRFFLYVPTFNVPGLNTALSFMAVASIFFGNLMALTQNNIKRLLGYSSIAHFGYLMIGLIALHQDPMVLERVAVYIVAYLFSSLGVLGVVSLMSSPYKGADAEALFSYRGLFWHRPILAAVMTIMLLSLAGIPMTLGFIAKFFLLLTAVNTHLWVLTATVVIGSA
type: DOMAIN
name: ND/Mrp_TM
description: NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domain
Protein sequence:
MARAKLPRSPSEGKAGPGDTPAGSAAPEEPHGLSPLLPTRGGGSVGSDVGQRLHVEDFSLDSSLSQVQVEFYVNENTFKERLKLFFIKNQRSSLRIRLFNFSLKLLTCLLYIVRVLLDNPDQGIGCWGCTKYNYTFNGSSSEFHWAPILWVERKMALWVIQVIVATISFLETMLLIYLSYKGNIWEQIFHVSFVLEMINTLPFIITVFWPPLRNLFIPVFLNCWLAKHALENMINDFHRAILRTQSAMFNQVLILFCTLLCLVFTGTCGIQHLERAGGNLNLLTSFYFCIVTFSTVGFGDVTPKIWPSQLLVVILICVTLVVLPLQFEELVYLWMERQKSGGNYSRHRARTEKHVVLCVSSLKIDLLMDFLNEFYAHPRLQDYYVVILCPSEMDVQVRRVLQIPLWSQRVIYLQGSALKDQDLMRAKMDNGEACFILSSRNEVDRTAADHQTILRAWAVKDFAPNCPLYVQILKPENKFHVKFADHVVCEEECKYAMLALNCICPATSTLITLLVHTSRGQEGQESPEQWQRMYGRCSGNEVYHIRMGDSKFFREYEGKSFTYAAFHAHKKYGVCLIGLKREENKSILLNPGPRHILAASDTCFYINITKEENSAFIFKQEEKQNRRGLAGQALYEGPSRLPVHSIIASMVAMDLQNTDCRPSQGGSGGGGGKLTLPTENGSGSRRPSIAPVLELADSSALLPCDLLSDQSEDEVTPSDDEGLSVVEYVKGYPPNSPYIGSSPTLCHLLPVKAPFCCLRLDKGCKHNS

Annotated regions:
phrase: DHVVCEEECKYAMLALNCICPATSTLITLLVHTSRGQEGQESPEQWQRMYGRCSGNEVYHIRMGDSKFFREYEGKSFTYAAFHAHKKYGVCLIG
type: DOMAIN
name: K_chnl_BK_asu
description: Calcium-activated potassium channel BK, alpha subunit

phrase: LCLVFTGTCGIQHLERAGGNLNLLTSFYFCIVTFSTVGFGDVTPKIWPSQLLVVILICVTLVVLPLQ
type: DOMAIN
name: K_chnl_dom
description: Potassium channel domain

phrase: EKHVVLCVSSLKIDLLMDFLNEFYAHPRLQDYYVVILCPSEMDVQVRRVLQIPLWSQRVIYLQGSALKDQDLMRAKMDNGEACFILSSRNEVDRTAADHQTILRAWAVKDFAPNCPLY
type: DOMAIN
name: Slo-like_RCK
description: Calcium-activated potassium channel slowpoke-like, RCK domain
Protein sequence:
MSWLFGIKGSKGEGTGPPLPLPPVQPGGEGSGDGGAGDRPGPKDKWSNFDPTGLERAAKAARELEHSRHAKEALSLAQMQEQTLQLEHQAKLKEYEAAVEQLKGDQIRVQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESVQKQEALRRATVEREMELRHKNEMLRVEAEARARAKAERENADIIREQIRLKAAEHRQTILESIRTAGTLFGEGFRAFVTDWDKVTATVAGLTLLAVGIYSAKNATSVAGRYIEARLGKPSLVRETSRITVLEALRHPIQVSRRLLSKPQDALEGVVLSPSLEARVRDIAIATRNTKKNKSLYRNVLMYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPMGRDGVTAMHKVFDWASTSRRGLLLFVDEADAFLRKRATEKISEDLRATLNAFLHRTGQHSSKFMLVLASNQPEQFDWAINDRIDEMVSFELPQREERERLVRMYFDKYVLKPATEGKQRLKLAQFDYGKKCSEIAQLTEGMSGREISQLAVAWQAMAYASEDGVLTEAMMDARVQDAIQQHRQKMQWLKAEGSQPPTLRTQAE

Annotated regions:
phrase: LYRNVLMYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPMGRDGVTAMHKVFDWASTSRRGLLLFVDEADAFLRKRATEKISEDLRATLNAFLHRTGQHSSKFMLVLASNQPEQFDWAINDRIDEMVSFELPQREERERLV
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VLMYGPPGTGKTLFAKKLALHSGMDYAIMTGGDVAPMGRDGVTAMHKVFDWASTSRRGLLLFVDEADAFLRKRATEKISEDLRATLNAFLHRTGQHSSKFMLVLASNQPEQFDWAINDRIDEMVSF
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: RPGPKDKWSNFDPTGLERAAKAARELEHSRHAKEALSLAQMQEQTLQLEHQAKLKEYEAAVEQLKGDQIRVQAEERRKTLSEETRQHQARAQYQDKLARQRYEDQLKQQQLLNEENLRKQEESVQKQEALRRATVEREMELRHKNEMLRVEAEARARAKAERENADIIREQIRLKAAEHRQTILESIRTAGTLFGEGFRAFVTDWDKVTATVAGLTLLAVGIYSAKNATSVAGRYIEARLGKPSLV
type: DOMAIN
name: ATAD3_N
description: ATPase family AAA domain-containing protein 3, N-terminal
Protein sequence:
MMDWYAIQTYSGSEQSVKKAIENLANDHDIRDRIQEIIVPTEDIIEVSKKSKTKVMERSLYPGYVFIKVDLDTVLWHKIQSLPRVSRFIGENKKPTPLSEADIGHILEKMNNRAAPKPKIFFEQGEVVRVVEGPFANFTATVEEYDVEHRKLKLNVSIFGRTTPIEILYSQVEKII

Annotated regions:
phrase: MMDWYAIQTYSGSEQSVKKAIENLANDHDIRDRIQEIIVPTEDIIEVSKKSKTKVMERSLYPGYVFIKVDLDTVLWHKIQSLPRVSRFIGENKKPTPLSEADIGHILEK
type: DOMAIN
name: NGN-like_dom
description: NusG-like, N-terminal

phrase: MDWYAIQTYSGSEQSVKKAIENLANDHDIRDRIQEIIVPTEDIIEVSKKSKTKVMERSLYPGYVFIKVDLDTVLWHKIQSLPRVSRFIGENKKPTPLSEADIGH
type: DOMAIN
name: NGN-like_dom
description: NusG-like, N-terminal

phrase: WYAIQTYSGSEQSVKKAIENLANDHDIRDRIQEIIVPTEDIIEVSKKSKTKVMERSLYPGYVFIKVDLDTVLWHKIQSLPRVSRFIGENKKPTPLSEADIGHILEK
type: DOMAIN
name: NGN
description: NusG, N-terminal

phrase: FFEQGEVVRVVEGPFANFTATVEEYDV
type: DOMAIN
name: KOW
description: KOW

phrase: IFGRTTPIE
type: CONSERVED_SITE
name: Transcrpt_antiterm_NusG_bac_CS
description: Transcription antitermination protein, NusG, bacteria, conserved site
Protein sequence:
MAQFHYECVESKTDKDRSQYGKFIIEPLARGQGTTVGNALRRVLLSNLEGTAITSVRIAGVNHEFATIKGVREDVLEILLNMKEVVLKSYSEQPQIGRLRVEGPATVTADRFDVPSEVEVIDRSQYIATLSPGSILEMEFRIEKGTGYKAVDRTRDDVATLDFLQIDAIFMPVRKVNYTIEDAHIGSSLEQDRLIMDIWTNGSYTPQDALSNAAGILMSLFEPLKDITNMADIPSGETTDPTSQIPIEELQLSVRAYNCLKRAQINSVADLLDYSQEDLLEIKNFGQKSAEEVIEALQKRLGITLPQEKVAKAT

Annotated regions:
phrase: EPLARGQGTTVGNALRRVLLSNLEGTAITSVRIAGVNHEFATIKGVREDVLEILLNMKEVVLKSYSEQPQIGRLRVEGPATVTADRFDVPSEVEVIDRSQYIATLSPGSILEMEFRIEKGTGYKAVDRTRDDVATLDFLQIDAIFMPVRKVNYTIEDAHIGSSLEQDRLIMDIWTNGSYTPQDALSNAAGILMS
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: DPTSQIPIEELQLSVRAYNCLKRAQINSVADLLDYSQEDLLEIKNFGQKSAEEVIEALQ
type: DOMAIN
name: RNAP_asu_C
description: RNA polymerase, alpha subunit, C-terminal

phrase: VRIAGVNHEFATIKGVREDVLEILLNMKEVVLKSYSEQPQIGRLRVEGPATVTADRFDVPSEVEVIDRSQYIATLSPGSILEMEFRIEKGTGYKAVDRTRDDVATLDFLQIDAIF
type: DOMAIN
name: DNA-dir_RNA_pol_insert
description: DNA-directed RNA polymerase, insert domain

phrase: YGKFIIEPLARGQGTTVGNALRRVLLSNLEGTAITSVRIAGVNHEFATIKGVREDVLEILLNMKEVVLKSYSEQPQIGRLRVEGPATVTADRFDVPSEVEVIDRSQYIATLSPGSILEMEFRIEKGTGYKAVDRTRDDVATLDFLQIDAIFMPVRKVNYTIEDAHIGSSLEQDRLIMDIWTNGSYTPQDALSNAAGILMSLFEPLKD
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type
Protein sequence:
MIKPQLSKKIDSVAVLQEKISTAKTVIVFEYASLPVSSFMQLRRELKKTSCEVKVYPKNIMQRAVTNAKQDDLVTFLKGAKALIISPQELLEPIKTIYNFAKKNKAVKIVSGIVEQKIVSLQEIKTLATLPSKEQMLALLAASMFAPLQHLAIGLNMLVQTKKQENPQQ

Annotated regions:
Protein sequence:
MDRAEKREFVAWLNGAFKESGSVVVAHYTGLTVAQMSDLRSKMRDAGGAVKVAKNRLAKIALQGTESEGIADLFTGQTVVAYANDPITAPKVAVEFAKANDKLVILGGAMGATTLNADGVKSLASLPSLDELRAKLVGMIQTPAQRLAVLTSAPAGQIARVIGAHARKNEAA

Annotated regions:
phrase: KREFVAWLNGAFKESGSVVVAHYTGLTVAQMSDL
type: CONSERVED_SITE
name: Ribosomal_uL10_CS_bac
description: Large ribosomal subunit protein uL10, conserved site, bacteria
Protein sequence:
MPDSTIPLLCVLGLLALSSACYIQNCPRGGKRSFPDLKRPCMSCGPGNRGLCFGPSICCGEGMGCYMGSPEAASCVEENYLTSPCEVGGRVCGSEEGHCAAPGVCCDAESCLLDSDCLDDSKRQPPSEQYSSLMEGLAGDLLQWMLHATRRERPQ

Annotated regions:
phrase: CYIQNCPR
type: CONSERVED_SITE
name: Neurohypophysial_hormone_CS
description: Neurohypophysial hormone, conserved site

phrase: CYIQNCPR
type: CONSERVED_SITE
name: Neurohypophysial_hormone_CS
description: Neurohypophysial hormone, conserved site
Protein sequence:
MKHSYFISDLHLSETQPELTALFVDFMQNLAPQAERLYILGDLFDFWIGDDEQSTLIQQVKDLIKSVSNQGVQCYFQHGNRDFLIGERFSKETGAQLLPDYQLITLYDKKILLCHGDTLCIDDVAYQQFRRRVHQKWLQRLFLCLPLKVRLKIAEKIRAKSNQDKQAKSQEIMDINQAFTTEKVQEFGVNLLIHGHTHREAIHQQEGFTRIVLGDWRKNYASILKMDESGEFGFIKD

Annotated regions:
phrase: FISDLHLSETQPELTALFVDFMQNLAPQAERLYILGDLFDFWIGDDEQSTLIQQVKDLIKSVSNQGVQCYFQHGNRDFLIGERFSKETGAQLLPDYQLITLYDKKILLCHGDTLCIDDVAYQQFRRRVHQKWLQRLFLCLPLKVRLKIAEKIRAKSNQDKQAKSQEIMDINQAFTTEKVQEFGVNLLIHGHTH
type: DOMAIN
name: Calcineurin-like_PHP_ApaH
description: Calcineurin-like phosphoesterase domain, ApaH type
Protein sequence:
MIEFILNGQPVRVTEVPEDAPLLWVVREHLKLSGTKFGCGLGLCGACTVHINGEAARSCITPLSVVARQSVTTIEGLDPQHAHPLQRAWIAEQVPQCGYCQSGQIMQAAALLKKVPKPSDAQIVEAMDGNLCRCGTYQRIKIAIHRAAKEAA

Annotated regions:
phrase: TIEGLDPQHAHPLQRAWIAEQVPQCGYCQSGQIMQAAALLKKVPKPSDAQIVEAMDGNLCRCGTYQRIKIAI
type: DOMAIN
name: 2Fe-2S-bd
description: [2Fe-2S]-binding

phrase: CGLGLCGA
type: BINDING_SITE
name: 2Fe2S_fd_BS
description: 2Fe-2S ferredoxin, iron-sulphur binding site

phrase: MIEFILNGQPVRVTEVPEDAPLLWVVREHLKLSGTKFGCGLGLCGACTVHINGEAARSCITPLSVVARQSVTTIEG
type: DOMAIN
name: 2Fe-2S_ferredoxin-type
description: 2Fe-2S ferredoxin-type iron-sulfur binding domain

phrase: IEFILNGQPVRVTEVPEDAPLLWVVREHLKLSGTKFGCGLGLCGACTVHI
type: DOMAIN
name: 2Fe-2S_ferredoxin-type
description: 2Fe-2S ferredoxin-type iron-sulfur binding domain

phrase: LNGQPVRVTEVPEDAPLLWVVREHLKLSGTKFGCGLGLCGACTVHINGEAARS
type: DOMAIN
name: 2Fe-2S_ferredoxin-type
description: 2Fe-2S ferredoxin-type iron-sulfur binding domain
Protein sequence:
MDNKIIYLTELDSSVDKSEPFVMGIDEAGRGPVMGPMVYGCCYAPISKSTTLKSMKFNDSKKLTEQQRDQLFDKMGESNKILAYETDVITAEILSEKMLYKKPISLNVISHESAIGLIRSVLKKGVNVQELYLDTVGPPDKYQLMLKKLFPEIGKIIVSKKADSLYPIVSAASIAAKVVRDFEITNKNFDYLNIYDQDEQLSTDFGSGYPSDPLSKKWLVKNRDKVFGYPNFIRFSWKTTETAMRGACFGVDWVLENDKLKQHFQENQNDKKRFMFFKENNIENCINDF

Annotated regions:
phrase: MGIDEAGRGPVMGPMVYGCCYAPISKSTTLKSMKFNDSKKLTEQQRDQLFDKMGESNKILAYETDVITAEILSEKMLYKKPISLNVISHESAIGLIRSVLKKGVNVQELYLDTVGPPDKYQLMLKKLFPEIGKIIVSKKADSLYPIVSAASIAAKVVRDFEITNKNFDYLNIYDQDEQLSTDFGSGYPSDPLSKKWLVKNRDKVFGYPNFIRFSWKT
type: DOMAIN
name: RNase_HII/HIII_dom
description: Ribonuclease HII/HIII domain

phrase: PFVMGIDEAGRGPVMGPMVYGCCYAPISKSTTLKSMKFNDSKKLTEQQRDQLFDKMGESNKILAYETDVITAEILSEKMLYKKPISLNVISHESAIGLIRSVLKKGVNVQELYLDTVGPPDKYQLMLKKLFPEIGKIIVSKKADSLYPIVSAASIAAKVVRDFEITNKNFDYLNIYDQDEQLSTDFGSGYPSDPLSKKWLVKNRDKVFGYPNFIRFSWKTTETAMRGAC
type: DOMAIN
name: RNase_HII/HIII_dom
description: Ribonuclease HII/HIII domain
Protein sequence:
MSILLIDLSGQELRQEEIELLEHPLVAGLILFSRNFYDIEQIRHLIRSVRQKVKKPLLITVDQEGGRVQRFRQGLTQLPAMQSFACLLSDPQEQQEMAWRAGWQMAAEMTALDIDLSFAPVLDLGHQCKAIGDRSFHYEEKKLIELAEKFIQGMRQIGMSATGKHFPGHGHVLADSHLETPYDDRAKELIFAQDIRPFQSLIKQGLLDAVMPAHVIYTQCDNQPASGSSYWLKEVLRQQLGFQGAIFSDDLGMKGAGFMGDFVARCTQSLQAGCDLLLLCNEPEAVVQVLDRFKPQESQNKRIIRQTRLNKLFKKQRIDWQTLRTQRDWLENHKKLTALQQDWLAYKG

Annotated regions:
phrase: ELRQEEIELLEHPLVAGLILFSRNFYDIEQIRHLIRSVRQKVKKPLLITVDQEGGRVQRFRQGLTQLPAMQSFACLLSDPQEQQEMAWRAGWQMAAEMTALDIDLSFAPVLDLGHQCKAIGDRSFHYEEKKLIELAEKFIQGMRQIGMSATGKHFPGHGHVLADSHLETPYDDRAKELIFAQDIRPFQSLIKQGLLDAVMPAHVIYTQCDNQPASGSSYWLKEVLRQQLGFQGAIFSDDLGMKGAGFMGDFVARCTQSLQAGCDLLLLCNEPEAVVQVLDRF
type: DOMAIN
name: Glyco_hydro_3_N
description: Glycoside hydrolase, family 3, N-terminal
Protein sequence:
MQSLRCVSWLAGLLCLLFSTPVFAASAAPLDLTSSLVGFVCIAIFVVAYVLVMGEEKLHMRKSKPVLVAAGLIWILIGWVYISRDIPDVTEAAFRHNLLEFAELMLFLLVAMTYINALEERRLFDALRAWMIRKGFSYQNLFWITGFLSFFISPIADNLTTALLMCAVVMKVAEGDKRFINLCCVNIVIAANAGGAFSPFGDITTLMVWQAGLVRIDEFLVLFFPALVNYLIPAAVMSFFVEKRQPSAVYEDVELKRGALRILTLFLLTVATAVLCHSLLHLPPVLGMMMGLGYLQFFGYFLRMTLPGSLARKRAMAEREGDQEKLKRLGGVVPFDVFSRVSRAEWDTLLFFYGIVMCVGGLGFLGYLGLMSDLLYEGWNPTSANILLGVISAVIDNIPVMFAVLAMQPEMSHGHWLLITLTAGVGGSLLSIGSAAGVALMGQARGYYTFFGHLKWAPVIFIGYIASIAVHLWLNADLFHIYD

Annotated regions:
phrase: VLVMGEEKLHMRKSKPVLVAAGLIWILIGWVYISRDIPDVTEAAFRHNLLEFAELMLFLLVAMTYINALEERRLFDALRAWMIRKGFSYQNLFWITGFLSFFISPIADNLTTALLMCAVVMKVAEGDKRFINLCCVNIVIAANAGGAFSPFGDITTLMVWQAGLVRIDEFLVLFFPALVNYLIPAAVMSFFVEKRQPSAVYEDVELKRGALRILTLFLLTVATAVLCHSLLHLPPVLGMMMGLGYLQFFGYFLRMTLPGSLARKRAMAEREGDQEKLKRLGGVVPFDVFSRVSRAEWDTLLFFYGIVMCVGGLGFLGYLGLMSDLLYEGWNPTSANILLGVISAVIDNIPVMFAVLAMQPEMSHGHWLLITLTA
type: DOMAIN
name: Cit_transptr-like_dom
description: Citrate transporter-like domain
Protein sequence:
MNIFRLTGDLSHLAAIVILLLKIWKTRSCAGISGKSQLLFALVFTTRYLDLFTSFISLYNTSMKVIYLACSYATVYLIYLKFKATYDGNHDTFRVEFLVVPVGGLSFLVNHDFSPLEILWTFSIYLESVAILPQLFMISKTGEAETITTHYLFFLGLYRALYLVNWIWRFYFEGFFDLIAVVAGVVQTILYCDFFYLYITKVLKGKKLSLPA

Annotated regions:
Protein sequence:
MVAIIVHGGAGTIRKEERIPKVLEGVREAVLAGWKELKKGSALDAVEEAIKVLEDNPIFNAGTGSVLTIDGKVEMDAAIMRGKTLEAGAVAGIWGVKNPISVARKVMEKTDHVLLVGEGAVKFARIMGFPEYDPTTEERRKQWQELKEKLMKGEVRHWKKLGELIKEHPEVLRSTVGAVAFDGEEVVAGTSTGGVFLKMFGRVGDTPIIGAGTYANEVAGASCTGLGEVAIKLALAKTATDFVRLGLDAQAASEAAIELATKHFGKDTMGIIMVDSRGNVGFAKNTKHMSYAFMKEGMNEPEAGV

Annotated regions:
Protein sequence:
MTKKRICVIGAGASGLCSIKCCLDEDLEPVCFERTDDIGGLWRYQENPEEGRASIYKSVIINTSKEMMCFSDYPIPDHYPNFMHNSQILEYFRMYAKDFNLLKYIQFKTTVCSVKKRPDFSTSGQWEVVTECEGKKEANVFDGVMVCTGHHTNAHLPLESFSGIEKFRGQYFHSRDYKNPEAFAGKRVIIIGIGNSGGDLAVEISHTAKQVFLSTRRGAWILNRVGDHGYPFDVVHSSRFKYLISKICGQALTSTFLEKRMNQRFDHEMFGLKPKHRALSQHPTVNDDLPNRIISGLVKVKGNVKEFTETAAIFEDGSREDDIDVVIFATGYSFAFPFLEDSIKVVKNKISLYKKVFPPNLEKPTLAIIGLIQPLGAIMPIAELQGRWATQVFKGLKKLPSQSEMMADISKTQEEMAKRYVESQRHTIQGDYIDTMDQIADLMGVKPNLLSLAFTDPKLALQLFWGPCTPAQFRLQGPGKWDGARKTILTTHDRIRKPMKTRVIEKNNSIALTKTMGRIMLAVIFFAVIMAYF

Annotated regions:
Protein sequence:
MAKPLTDGERRKQISVRGLAGLGDVAEVRKSFNRHLHFTLVKDRNVATRRDYYLALAHTVRDHLVGRWIRTQQRYYERDPKRIYYLSLEFYMGRTLQNTMVNLGLQNACDEAIYQLGLDLEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKIVNGWQVEEADDWLRYGNPWEKARPEYMLPVHFYGRVEHSPEGVRWLDTQVVLAMPYDTPVPGYKNDTVNTMRLWSAKAPNDFKLHDFNVGGYIEAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTSFETFPDKVAIQLNDTHPALAIPELMRILVDVEKVDWGKAWEITKKTCAYTNHTVLPEALERWPVSMFEKLLPRHLDIIYAINQRHLDHVAALFPGDVDRLRRMSVIEEGDCKRINMAHLCVIGSHAVNGVARIHSEIVRQSVFKDFYELEPEKFQNKTNGITPRRWLLLCNPGLAETIVERIGEDFLTDLSQLKKLLPLVGDEALIRDVAQVKQENKVKFSAFLEKQYGVKVNPSSMFDVHVKRIHEYKRQLLNCLHVVTLYNRIKKDPTQAFVPRTVMIGGKAAPGYHMAKKIIKLVTSIGDIVNHDPIVGDRLKVIFLENYRVSLAEKVIPAADLSQQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGAENLFIFGLRVEDVEALDRKGYNAHEYYNHLPELQQAVDQINSGFFSPREPDCFKDVVNMLLNHDRFKVFADYEAYVACQAQVDQLYRNPKEWTKKVIRNIACSGKFSSDRTITEYARDIWGAEPPALQTPPPSLPRD

Annotated regions:
phrase: EASGTGNMKFML
type: CONSERVED_SITE
name: Pyridoxal_P_attach_site
description: Phosphorylase pyridoxal-phosphate attachment site
Protein sequence:
MKCPFCGAEDTAVADTRLNDEADVVRRRRKCNACDKRFTTYERAEIQLPQVVKKNGLRTEFSRAKLRASLELALRKRPVSIESVDAAVADIEERLLSAGEREVTTQQLGELVMRELKKLDKVAYIRFASVYRNFEDVDAFSRAIREVSPAAKKK

Annotated regions:
phrase: QVVKKNGLRTEFSRAKLRASLELALRKRPVSIESVDAAVADIEERLLSAGEREVTTQQLGELVMRELKKLDKVAYIRFASVYRNFE
type: DOMAIN
name: ATP-cone_dom
description: ATP-cone domain

phrase: PQVVKKNGLRTEFSRAKLRASLELALRKRPVSIESVDAAVADIEERLLSAGEREVTTQQLGELVMRELKKLDKVAYIRFASVYRNFEDVD
type: DOMAIN
name: ATP-cone_dom
description: ATP-cone domain

phrase: MKCPFCGAEDTAVADTRLNDEADVVRRRRKCNACDKRFTTY
type: DOMAIN
name: NrdR-like_N
description: Transcriptional repressor NrdR-like, N-terminal domain
Protein sequence:
MYDFEPKMNALVPMVIEQTNRGERGYDIYSRLLKERIIFLIGGVNDAVASLICSQLLFLESENPSKDIALYINSPGGYVSAGLAIYDTMQYIRPQVSTVCMGQAASMGSLLLAAGAPGKRFSLPNSRIMIHQPSGGAQGQASDIEIQAQEILKLRSRLNDIYVKHTGQSLDTIEAXMERDKFMSPEEAKAFGLIDEVVEKRPGSIGDGAA

Annotated regions:
phrase: TVCMGQAASMG
type: ACTIVE_SITE
name: ClpP_Ser_AS
description: ClpP, Ser active site

phrase: RFSLPNSRIMIHQ
type: ACTIVE_SITE
name: ClpP_His_AS
description: ClpP, histidine active site
Protein sequence:
MTVFKHIAIIGLGLIGSSAARATKAYCPDVTVSLYDKSEFVRDRARALNLGDNVTDDIQDAVREADLVLLCVPVRAMGIVAAAMAPALKKDVIICDTGSVKVSVIKTLQDNLPNHIIVPSHPLAGTENNGPDAGFAELFQDHPVILTPDAHTPAQAIAYIADYWEEIGGRINLMSAEHHDHVLALTSHLPHVIAYQLIGMVSGYEKKSRTPIMRYSAGSFRDATRVAASEPRLWQDIMLENAPALLPVLDHFIADLKKLRTAIASQDGDYLLEHFKESQKARLALKTDHDIRP

Annotated regions:
phrase: ARATKAYCPDVTVSLYDKSEFVRDRARALNLGDNVTDDIQDAVREADLVLLCVPVRAMGIVAAAMAPALKKDVIICDTGSVKVSVIKTLQDNLPNHIIVPSHPLAGTENNGPDAGFAELFQDHPVILTPDAHTPAQAIAYIADYWEEIGGRI
type: DOMAIN
name: PDH_N
description: Prephenate dehydrogenase, nucleotide-binding domain

phrase: SAEHHDHVLALTSHLPHVIAYQLIGMVSGYEKKSRTPIMRYSAGSFRDATRVAASEPRLWQDIMLENAPALLPVLDHFIADLKKLRTAIASQDGDYLLEHFK
type: DOMAIN
name: PDH_C
description: Prephenate dehydrogenase, dimerization domain

phrase: KHIAIIGLGLIGSSAARATKAYCPDVTVSLYDKSEFVRDRARALNLGDNVTDDIQDAVREADLVLLCVPVRAMGIVAAAMAPALKKDVIICDTGSVKVSVIKTLQDNLPNHIIVPSHPLAGTENNGPDAGFAELFQDHPVILTPDAHTPAQAIAYIADYWEEIGGRINLMSAEHHDHVLALTSHLPHVIAYQLIGMVSGYEKKSRTPIMRYSAGSFRDATRVAASEPRLWQDIMLENAPALLPVLDHFIADLKKLRTAIASQDGDYLLEHFKESQKARLALKTDHDIR
type: DOMAIN
name: Prephen_DH
description: Prephenate dehydrogenase
Protein sequence:
MTEQVVNVIGAGLAGSEAAWQIAKRGVKVRLYEMRPVKQTPAHHTDKFAELVCSNSLRANGLTNAVGVIKEEMRILDSVILKAADQCSVPAGGALAVDRHEFAGYVTEAVKNHPLVEVIHEEVTEIPEGITVIATGPLTSKALAEKIQGLTGLDYLYFYDAAAPIIEKDSIDMDKVYLKSRYDKGEAAYLNCPMTKEEFDRFRQALIEAEVVPLKEFEKEIYFEGCMPIEVMASRGEKTMLFGPMKPVGLEDPKTGKRPYAVVQLRQDDAAGTLYNIVGFQTHLKWGPQKEVLQLIPGLENVEIVRYGVMHRNTFINSPKVLEKTYQLREQKNIFFAGQMTGVEGYVESAGSGLIAGINAARLALGQEPIIFPFETALGSMARYITEAQSKNFQPMNVNFGIFPELPPGRRSKPERAEMHATRAISTIHNFVNSQTI

Annotated regions:
phrase: AGQMTGVEGYVESAGSGLIAGIN
type: CONSERVED_SITE
name: MnmG-rel_CS
description: MnmG-related, conserved site

phrase: VNVIGAGLAGSEAAWQIAKRGVKVRLYEMRPVKQTPAHHTDKFAELVCSNSLRANGLTNAVGVIKEEMRILDSVILKAADQCSVPAGGALAVDRHEFAGYVTEAVKNHPLVEVIHEEVTEIPEGITVIATGPLTSKALAEKIQGLTGLDYLYFYDAAAPIIEKDSIDMDKVYLKSRYDKGEAAYLNCPMTKEEFDRFRQALIEAEVVPLKEFEKEIYFEGCMPIEVMASRGEKTMLFGPMKPVGLEDPKTGKRPYAVVQLRQDDAAGTLYNIVGFQTHLKWGPQKEVLQLIPGLENVEIVRYGVMHRNTFINSPKVLEKTYQLREQKNIFFAGQMTGVEGYVESAGSGLIAGINAARLALG
type: DOMAIN
name: MnmG_N
description: MnmG, N-terminal domain