nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTNKQKLNLAGLTLPGLISLFSDLKEKPFRAGQVMKWIHQRGLTDIDLMSDLSKNLRNRLFEVSEIRLPIILNESVSSDGSRKWIVEVTSGSQIEMVYIPEAGRGTLCISSQAGCSLDCTFCATGKQGFDRNLSVAEIVGQLWWANKLLGNFDQLNPNPISNVVMMGMGEPLLNFNNVIDSVSIMMEDFAYGLSKRKVTISTSGVIPAIKKMNGLTEASLAVSLHAPNDTLRSQIMPINKKYPIAELLSSVKSYMESLSDSRVPLIEYTLIKGVNDHRQHARDLAELLVSFPXKINLIPFNTFDSSNFERPSGSSIANFREILRKAGYTVTVRTTRADDISAACGQLVGGVSDRTQRSMRYQLKMDKSNESIKLVGKLATAAERI

Annotated regions:
phrase: SSQAGCSLDCTFCATGKQGFDRNLSVAEIVGQLWWANKLLGNFDQLNPNPISNVVMMGMGEPLLNFNNVIDSVSIMMEDFAYGLSKRKVTISTSGVIPAIKKMNGLTEASLAVSLHAPNDTLRSQIMPINKKYPIAELLSSVKSYMESLSDSRVPLIEYTLIKGVNDHRQH
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: NLAGLTLPGLISLFSDLKEKPFRAGQVMKWIHQRGLTDIDLMSDLSKNLRNRLFEVSE
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: EAGRGTLCISSQAGCSLDCTFCATGKQGFDRNLSVAEIVGQLWWANKLLGNFDQLNPNPISNVVMMGMGEPLLNFNNVIDSVSIMMEDFAYGLSKRKVTISTSGVIPAIKKMNGLTEASLAVSLHAPNDTLRSQIMPINKKYPIAELLSSVKSYMESLSDSRVPLIEYTLIKGVNDHRQHARDLAELLVSFPXKINLIPFNTFDSSNFERPSGSSIANFREILRKAGYTVTVRTTRADDI
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MPSVGIVIGDGKKEYPGKLTLYVTVTCIVAAMGGLIFGYDIGISGGVTTMDSFQQKFFPSVYEKQKKDHDSNQYCRFDSVSLTLFTSSLYLAALCSSLVASYVTRQFGRKISMLLGGVLFCAGALLNGFATAVWMLIVGRLLLGFGIGFTNQSVPLYLSEMAPYKYRGALNIGFQLSITIGILVANVLNFFFSKISWGWRLSLGGAVVPALIITVGSLILPDTPNSMIERGQFRLAEAKLRKIRGVDDIDDEINDLIIASEASKLVEHPWRNLLQRKYRPHLTMAILIPAFQQLTGINVIMFYAPVLFQTIGFGSDAALISAVVTGLVNVGATVVSIYGVDKWGRRFLFLEGGFQMLISQVAVAAAIGAKFGVDGTPGVLPKWYAIVVVLFICIYVAAFAWSWGPLGWLVPSEIFPLEIRSAAQSITVSVNMIFTFLIAQVFLMMLCHLKFGLFIFFAFFVVVMSIFVYLFLPETRGVPIEEMNRVWRSHWYWSKFVDAEKNLTKVVI

Annotated regions:
phrase: SIYGVDKWGRRFLFLEG
type: CONSERVED_SITE
name: Sugar_transporter_CS
description: Sugar transporter, conserved site

phrase: TCIVAAMGGLIFGYDIGISGGVTTMDSFQQKFFPSVYEKQKKDHDSNQYCRFDSVSLTLFTSSLYLAALCSSLVASYVTRQFGRKISMLLGGVLFCAGALLNGFATAVWMLIVGRLLLGFGIGFTNQSVPLYLSEMAPYKYRGALNIGFQLSITIGILVANVLNFFFSKISWGWRLSLGGAVVPALIITVGSLILPDTPNSMIERGQFRLAEAKLRKIRGVDDIDDEINDLIIASEASKLVEHPWRNLLQRKYRPHLTMAILIPAFQQLTGINVIMFYAPVLFQTIGFGSDAALISAVVTGLVNVGATVVSIYGVDKWGRRFLFLEGGFQMLISQVAVAAAIGAKFGVDGTPGVLPKWYAIVVVLFICIYVAAFAWSWGPLGWLVPSEIFPLEIRSAAQSITVSVNMIFTFLIAQVFLMMLCHLKFGLFIFFAFFVVVMSIFVYLFLPET
type: DOMAIN
name: MFS_dom
description: Major facilitator superfamily domain

phrase: LLGFGIGFTNQSVPLYLSEMAPYKY
type: CONSERVED_SITE
name: Sugar_transporter_CS
description: Sugar transporter, conserved site
Protein sequence:
MLIEFTKMHGLGNDFMVIDLVTQRLELTPELITLLADRNLGIGFDQLLVVEPPMRPDVDFRYRIFNSDGSEVEQCGNGARCFARFVQARKLSFKQRIRVETKSGILTLSTDNYGWVEVDMGKPRFEPAEIPFTPKAITKIQNAYHLDVEGTPVQLYVANMGNPHAVIKVDDILTADVEKLGKAIESHPAFPERVNVGFMQVMNQRHIRLRVYERGVGETQACGTGACAAVATGIREGWLDEGEEIRAQLYGGSLLIRWSPGYSVMMTGPTAFVYEGVFSPDGIMAQAGLKPLS

Annotated regions:
phrase: NSDGSEVEQCGNGA
type: ACTIVE_SITE
name: DAP_epimerase_AS
description: Diaminopimelate epimerase, active site
Protein sequence:
MTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVHVAAEFRCRGDDLLGIYADAIREQVQAMQHLRLQDDEYQWLSALPFFQADYLNWLREFRFNPEQVTVSNDNGKLDIRLSGPWREVILWEVPLLAVISEMVHRYRSPQTDVAQALDTLESKLVDFSALTAGLDMSRFHLMDFGTRRRFSREVQETIVKRLQQESWFVGTSNYDLARRLSLTPMGTQAHEWFQAHQQISPDLANSQRAALAAWLEEYPDQLGIALTDCITMDAFLRDFGVEFASRYQGLRHDSGDPVEWGEKAIAHYEKLGIDPQSKTLVFSDNLDLRKAVELYRHFSSRVQLSFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFDLPHIKKAS

Annotated regions:
phrase: FHLMDFGTRRRFSREVQETIVKRLQQESWFVGTSNYDLARRLSLTPMGTQAHEWFQAHQQISPDLANSQRAALAAWLEEYPDQLGIALTDCITMDAFLRDFGVEFASRYQGLRHDSGDPVEWGEKAIAHYEKLGIDPQSKTLVFSDNLDLRKAVELYRHFSSRVQLSFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFDLP
type: DOMAIN
name: N/Namide_PRibTrfase
description: Nicotinate/nicotinamide phosphoribosyltransferase

phrase: LDTDAYKLHMQQAVFHHYYDVHVAAEFRCRGDDLLGIYADAIREQVQAMQHLRLQDDEYQWLSALPFFQADYLNWLREFRFNPEQVTVSNDNGKLDIRLSGPWREVILWEVPLLAVI
type: DOMAIN
name: NAPRTase_N
description: Nicotinate phosphoribosyltransferase, N-terminal domain
Protein sequence:
MRPILLSGHERSLTQVKYNREGDLLFSCSKDHIINVWFTHNGERLGTYNGHNGTVWSVDVDSKSEFMVSGSADNSMRLWKVSTGECLKAWEFPTAIKRVSWSEDDTKIALVTEQRMGHQGAVRVFEINRDGGPQPDEPLLVFNPIGSKAQVVAFSSLDKHLITGHENGKVALWDVNTGEEVASKEKNHIGLITDLQMSADRTYFVTSSKDKSARLYDSRTLEVIKSYQDPQTPLNSAALIPGKPYLLMGGGQEAMAVTTTSARQGHFEIRMWHVVFEEEVSRIKGGFGPCNSIAVHPEGKGYAIGGEDGYVRLHHFDENTFRAKPYGHETEPKELD

Annotated regions:
phrase: TGEEVASKEKNHIGLITDLQMSADRTYFVTSSKDKSARLY
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: TGECLKAWEFPTAIKRVSWSEDDTKIALVTEQRMGHQGAVRVF
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: FEEEVSRIKGGFGPCNSIAVHPEGKGYAIGGEDGYVRLH
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: NGERLGTYNGHNGTVWSVDVDSKSEFMVSGSADNSMRLW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: PDEPLLVFNPIGSKAQVVAFSSLDKHLITGHENGKVALW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: MRPILLSGHERSLTQVKYNREGDLLFSCSKDHIINVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LSGHERSLTQVKYNREGDLLFSCSKDHIINVWFTHNGERLG
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: VAFSSLDKHLITGHENGKVALWDVNTGEEVA
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LITGHENGKVALWD
type: CONSERVED_SITE
name: WD40_repeat_CS
description: WD40 repeat, conserved site

phrase: EKNHIGLITDLQMSADRTYFVTSSKDKSARLYDSRTLEVIK
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: YNGHNGTVWSVDVDSKSEFMVSGSADNSMRLWKVSTGECLK
type: REPEAT
name: WD40_rpt
description: WD40 repeat
Protein sequence:
MLQQAIDRDPVDRIDRYPTRTAEPAPHIERLDPTVWGEVHSEQLSTFDRDGFSIMENLLSPEEVSEFRAEVERLAADKSLLDDERVIREKTSNRVRSVFEVHKLSAAVADLVRQTRIVGLARQVLGSDVYLHQTRINYMPGFRGTGFYWHSDFETWHAEDGMPAPRAVSLSIALTDNYPFNGSLMVMPGSHRTFVPCVGATPADHYRESLREQEIGVPSTEDITVLAQRYGITQFTGRAGSALLFDSNVMHGSANNITPFPRSNIFLVFNSVENTLVEPFAAPAPRPTYIGSRDFTPL

Annotated regions:
Protein sequence:
MMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHENNIKVYIVAGNHEMPRRLGEESPLALLKDYVKILDGKDVINVNGEEIFICGTYYHKKSKREEMLDKLKNFESEAKNYKKKILMLHQGINPYIPLDYELEHFDLPKFSYYALGHIHKRILERFNDGILAYSGSTEIIYRNEYEDYKKEGKGFYLVDFSGNDLDISDIEKIDIECREFVEVNIKDKKSFNEAVNKIERCKNKPVVFGKIKREFKPWFDTLKDKILINKAIIVDDEFIDMPDNVDIESLNIKELLVDYANRQGIDGDLVLSLYKALLNNENWKELLDEYYNTKFRG

Annotated regions:
phrase: IKELLVDYANRQGIDGDLVLSLYKALLNNENWKELLDEYYNTK
type: DOMAIN
name: Mre11_C_arc
description: DNA double-strand break repair protein Mre11, C-terminal Rad50-binding domain, archaea

phrase: MMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHENNIKVYIVAGNHEMPRRLGEESPLALLKDYVKILDGKDVINVNGEEIFICGTYYHKKSKREEMLDKLKNFESEAKNYKKKILMLHQGINPYIPLDYELEHFDLPKFSYYALGHIH
type: DOMAIN
name: Calcineurin-like_PHP_ApaH
description: Calcineurin-like phosphoesterase domain, ApaH type

phrase: MFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEIKPDVVLHSGDLFNDLRPPVKALRIAMQAFKKLHENNIKVYIVAGNHEMPRRLGEESPLALLKDYVKILDGKDVINVNGEEIFICGTYYHKKSKREEMLDKLKNFESEAKNYKKKILMLHQGINPYIPLDYELEHFDLPKFSYYALGHIHKRILERFNDGILAYSGSTE
type: DOMAIN
name: Mre11_N
description: DNA double-strand break repair protein Mre11, N-terminal metallophosphatase domain
Protein sequence:
MAASTMAISSTAMAGTPIKVGSFGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHIADPVNNNAWAYATNFVPGN

Annotated regions:
Protein sequence:
MNEDIKNNLNNLDEFSGKIIVGLDEAGRGPVIGPMVIASVKINEKDLYKLQDLGLKDSKQLSKKKREELYVKISEICNVKKIVIAPEKIDEQMEITNLNKIELSAFSKLANHFIKENENISIYIDACSSNEQSFSNQFKAKLINKNVEIIAEHKADENYKIVSAASIIAKVTRDNVIEEYKKTFGEIGSGYPSDPKTKKFLKKYVHENKGLPKIARKSWATSKNLLKEIEESKIFQWVK

Annotated regions:
phrase: KIIVGLDEAGRGPVIGPMVIASVKINEKDLYKLQDLGLKDSKQLSKKKREELYVKISEICNVKKIVIAPEKIDEQMEITNLNKIELSAFSKLANHFIKENENISIYIDACSSNEQSFSNQFKAKLINKNVEIIAEHKADENYKIVSAASIIAKVTRDNVIEEYKKTFGEIGSGYPSDPKTKKFLKKYVHENKGLPKIARKSWATSKNLLKEIE
type: DOMAIN
name: RNase_HII/HIII_dom
description: Ribonuclease HII/HIII domain

phrase: VGLDEAGRGPVIGPMVIASVKINEKDLYKLQDLGLKDSKQLSKKKREELYVKISEICNVKKIVIAPEKIDEQMEITNLNKIELSAFSKLANHFIKENENISIYIDACSSNEQSFSNQFKAKLINKNVEIIAEHKADENYKIVSAASIIAKVTRDNVIEEYKKTFGEIGSGYPSDPKTKKFLKKYVHENKGLPKIARKSWA
type: DOMAIN
name: RNase_HII/HIII_dom
description: Ribonuclease HII/HIII domain
Protein sequence:
MRTNPTTSNPEVSIREKKNLGRIAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDMGNPLSVPVGGATLGRIFNVLGEPVDNLGPVDTRTTSPIHKSAPAFIELDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFNLILSGEFDSLPEQAFYLVGNIDEATAKATNLEMESKLKK

Annotated regions:
phrase: IAQIIGPVLDVAFPPGKMPNIYNALVVKGRDTLGQEINVTCEVQQLLGNNRVRAVAMSATEGLKRGMDVVDM
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_N
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain

phrase: RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: GIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNLAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGTLQERITSTKKGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDST
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_nucl-bd
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain

phrase: RIVGEEHYETAQQVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIR
type: DOMAIN
name: ATP-synt_VA_C
description: ATP synthase A/B type, C-terminal domain

phrase: PAVDPLDST
type: ACTIVE_SITE
name: ATPase_a/bsu_AS
description: ATPase, alpha/beta subunit, nucleotide-binding domain, active site
Protein sequence:
MANSPHGGILKDLIARDAPRREELYREAETLPAITLTERQLCDLELILNGGFSPLEGFMSEKDYNGVVENLRLTDGNLFSMPITLDLTQKTIEDLGIKSGARLALRDFRDDRNLAIITVEDVYKPDKDREAKLVFGGDPEHPAIKYLLNSAEEYYVGGKIDAIDRLMHYDYVDLRYSPAELRLHFDKLGWGRVVAFQTRNPMHRAHRELTVRAARARQANVLIHPVVGLTKPGDIDHFTRVRVYQALLPRYPNGMAVLGLLPLAMRMGGPREAIWHAIIRKNHGATHFIVGRDHAGPGKNSKGVDFYGPYDAQEAVEKYRDELGIEVVPFQQMTYLPDSDEYKPRDEVEAGVRTLDISGTELRRRLRTGVDIPDWFSYPEVVKVLRESHPPRAKQGFCVFLTGFQNSGKDAIARALNVTLNQQGGRAVSLLLGETVRHELSSELGYTREDRDKNIGRIAFVASELTKSGSAVIAAPIAPFETARKQARELVEKHGSFYLVHVATSLEFCEKTDKRGIYEKARRGEIKGFTGVDDPYEVPTKADLVVDAEKTNVRTIVHQIVLLLEAEGLLDQF

Annotated regions:
phrase: SPHGGILKDLIARDAPRREELYREAETLPAITLTERQLCDLELILNGGFSPLEGFMSEKDYNGVVENLRLTDGNLFSMPITLDLTQKTIEDLGIKSGARLALRDFRDDRNLAIITVEDVYKPDKDREAKLVFGGDPEHPAIKYLLNSAEEYYVGGKIDAI
type: DOMAIN
name: ATP-Sase_PUA-like_dom
description: ATP-sulfurylase PUA-like domain

phrase: DLRYSPAELRLHFDKLGWGRVVAFQTRNPMHRAHRELTVRAARARQANVLIHPVVGLTKPGDIDHFTRVRVYQALLPRYPNGMAVLGLLPLAMRMGGPREAIWHAIIRKNHGATHFIVGRDHAGPGKNSKGVDFYGPYDAQEAVEKYRDELGIEVVPFQQMTYLPDSDEYKPRDEVEAGVRTLDISGTELRRRLRTGVDIPDWFSYPEVVKVLR
type: DOMAIN
name: Sulfurylase_cat_dom
description: Sulphate adenylyltransferase catalytic domain
Protein sequence:
MQIWVGLGNPGAQYAMHRHNVGFMAVDTIAEVHRFDPWKKQFQGWSATGRIGNVKVLLLKPATFMNESGRSVGEAMRFFKRETGDVTVFHDELDLAPFKVKVKTGGGTAGHNGLRSTEAHIGNAFRRVRIGIGHPGHKDRVTGYVLGNYVKAELDPLAGMLGAIASEADWLASGDDARFMSEIALRLAD

Annotated regions:
phrase: GTAGHNGLRS
type: CONSERVED_SITE
name: Pept_tRNA_hydro_CS
description: Peptidyl-tRNA hydrolase, conserved site
Protein sequence:
MADPLGAAGRLPAVFMTPGTSSFADFLSRSAPHLLPGARSGLPGPVTEVAHGTTIVAVAFPGGVIMAGDRRATQGHMIAQRDVEKVHHADDYSCVGYAGTAGVGAELIRLFQVELEHYEKIEGSTLSLDAKANRLAAMVKGNLPMALQGLAVVPLFAGYDLDTGKGRIFSYDIAAAKSEERTYESIGSGSVFAKGSLKKRFRSDLSQDDAVRISVEALYDAADDDSATGGPDVIRKLYPIVAVVTADGYRRYADDEIEPVVTAIIADRSTNSGG

Annotated regions:
Protein sequence:
MKEKQFWNRILEFAQERLTRSMYDFYAIQAELIKVEENVATIFLPRSEMEMVWEKQLKDIIVVAGFEIYDAEITPHYIFTKPQDTTSSQVEEATNLTLYDYSPKLVSIPYSDTGLKEKYTFDNFIQGDGNVWAVSAALAVSEDLALTYNPLFIYGGPGLGKTHLLNAIGNEILKNIPNARVKYIPAESFINDFLDHLRLGEMEKFKKTYRSLDLLLIDDIQSLSGKKVATQEEFFNTFNALHDKQKQIVLTSDRSPKHLEGLEERLVTRFSWGLTQTITPPDFETRIAILQSKTEHLGYNFQSDTLEYLAGQFDSNVRDLEGAINDITLIARVKKIKDITIDIAAEAIRARKQDVSQMLVIPIDKIQTEVGNFYGVSIKEMKGSRRLQNIVLARQVAMYLSRELTDNSLPKIGKEFGGKDHTTVIHAHAKIKSLIDQDDNLRLEIESIKKKIK

Annotated regions:
phrase: IDKIQTEVGNFYGVSIKEMKGSRRLQNIVLARQVAMYLSRELTDNSLPKIGKEFGGKDHTTVIHAHAKIKSLIDQDDNLRLEIESIKKK
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: TYNPLFIYGGPGLGKTHLLNAIGNEILKNIPNARVKYIPAESFINDFLDHLRLGEMEKFKKTYRSLDLLLIDDIQSLSGKKVATQEEFFNTFNALHDKQKQIVLTSDRSPKHLEGLEERLVTRFSWGLTQTI
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: IDKIQTEVGNFYGVSIKEMKGSRRLQNIVLARQVAMYLSRELTDNSLPKIGKEFGGKDHTTVIHAHAK
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: IGKEFGGKDHTTVIHAHAK
type: CONSERVED_SITE
name: Chromosome_initiator_DnaA_CS
description: Chromosomal replication control, initiator DnaA, conserved site

phrase: LKEKYTFDNFIQGDGNVWAVSAALAVSEDLALTYNPLFIYGGPGLGKTHLLNAIGNEILKNIPNARVKYIPAESFINDFLDHLRLGEMEKFKKTYRSLDLLLIDDIQSLSGKKVATQEEFFNTFNALHDKQKQIVLTSDRSPKHLEGLEERLVTRFSWGL
type: DOMAIN
name: DnaA_dom
description: Chromosomal replication initiator protein DnaA, ATPAse domain

phrase: PIDKIQTEVGNFYGVSIKEMKGSRRLQNIVLARQVAMYLSRELTDNSLPKIGKEFGGKDHTTVIHAHAK
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal
Protein sequence:
MVLSSNWLSLQKSTDSDSVNKNKGGKKTKSNSKKRTVSVKKDKQYVDKKKKNGTGSKIMDMVANMNREIAKVEQERTKNTHADGQMINSEDRFESVLKQKLNEDVAKKSLSRTNGVGKYVSMDCEFVGVGPDGKDSALARVSIVNYYGNVVLDLFVRPKEPVTDWRTWVSGIKPHHMANAVTQEDCQKQVSNVLKGRILVGHSVHHDLTALMLSHPRRMIRDTSRHMPFRQKYSEGKTPSLKKLTKEILQLDIQDGEHSSIEDARATMLLYKSDKLEFEKLHNKQFGPSKPTQE

Annotated regions:
phrase: VSMDCEFVGVGPDGKDSALARVSIVNYYGNVVLDLFVRPKEPVTDWRTWVSGIKPHHMANAVTQEDCQKQVSNVLKGRILVGHSVHHDLTALMLSHPRRMIRDTSRHMPFRQKYSEGKTPSLKKLTKEILQLDIQDGEHSSIEDARATMLLY
type: DOMAIN
name: REX4_DEDDh_dom
description: RNA exonuclease 4, DEDDh 3'-5' exonuclease domain

phrase: KYVSMDCEFVGVGPDGKDSALARVSIVNYYGNVVLDLFVRPKEPVTDWRTWVSGIKPHHMANAVTQEDCQKQVSNVLKGRILVGHSVHHDLTALMLSHPRRMIRDTSRHMPFRQKYSEGKTPSLKKLTKEILQLDIQDGEHSSIEDARATMLLYKSDKLEFE
type: DOMAIN
name: Exonuclease_RNaseT/DNA_pol3
description: Exonuclease, RNase T/DNA polymerase III

phrase: VSMDCEFVGVGPDGKDSALARVSIVNYYGNVVLDLFVRPKEPVTDWRTWVSGIKPHHMANAVTQEDCQKQVSNVLKGRILVGHSVHHDLTALMLSHPRRMIRDTSRHMPFRQKYSEGKTPSLKKLTKEILQLDIQDGEHSSIEDARATMLL
type: DOMAIN
name: Exonuclease_RNaseT/DNA_pol3
description: Exonuclease, RNase T/DNA polymerase III
Protein sequence:
MEFYASLKSIAMHVPSERVKNAEFQQFLDTSDEWIEKRTGIKERRFASNEEKSSDLGVIAAKQAIERAHLTPKDIDLVVVATLSPDFLAMPSTACVLSAKLGIENKPAFDISAACTGFIYLLSVAKAYVESGMCENVLIVGAEKTSSVLDFKDRGTCILFGDGAGACVIGRTKRLKESILDVQISANGNFSNYLYTPRTLKPTPFNSKEEALEPFLCMKGNEVFKLAVKTLLKDVETILEKNALKPEDVRLFIPHQANFRIIQAVREHLDFKDEQVVLTVHKYGNTSAASIPMAMCEAYEEGRLKKGDLMLLDAFGGGLTWGSALVYFGG

Annotated regions:
phrase: FDISAACTGFIYLLSVAKAYVESGMCENVLIVGAEKTSSVLDFKDRGTCILFGDGAGACVIGRTKRLKESILDVQISAN
type: DOMAIN
name: ACP_syn_III_N
description: Beta-ketoacyl-[acyl-carrier-protein] synthase III, N-terminal

phrase: LEKNALKPEDVRLFIPHQANFRIIQAVREHLDFKDEQVVLTVHKYGNTSAASIPMAMCEAYEEGRLKKGDLMLLDAFGGGLTWGSAL
type: DOMAIN
name: ACP_syn_III_C
description: Beta-ketoacyl-[acyl-carrier-protein] synthase III, C-terminal
Protein sequence:
MASKSKGLVVLALLLAAAILVASADEHPQAKKEENEAGVENFFHGGGGHHGHGRGGHGGGGYGGGGGYGGGGGGYPGGGGGYGGGGGGYPGHGGEGGGGYGGGGGYPGHGGEGGGGYGGGGGYHGHGGEGGGGYGGGGGYHGHGGEGGGGYGGGGGGYPGHGGGGGHGGGRCKWGCCGHGFLHHGCRCCARADEVPEVRN

Annotated regions:
Protein sequence:
MSEKDFVQVAKLGKTVGLKGYVKLHNLSDFSSQFKKDATFFIKNTKEMLKIKHYNANNSTVLFENYEDIEKAKELTNLILFQSIEKSRQTCKLKKDEFFYFDILECEVFEEDKRLGKVVDILETGASYLFEIQSDEKWVEKKYPKIFFIPYLDKFVKNIDIEKRQIFCTQDAFLILENS

Annotated regions:
phrase: QVAKLGKTVGLKGYVKLHNLSDFSSQFKKDATFFIKNTKEMLKIKHYNANNSTVLFENYEDIEKAKELTNLILFQS
type: DOMAIN
name: RimM_N
description: RimM, N-terminal

phrase: DEFFYFDILECEVFEEDKRLGKVVDILETGASYLFEIQSDEKWVEKKYPKIFFIPYLDKFVKNIDIEKRQIFCTQD
type: DOMAIN
name: PRC-brl_dom
description: PRC-barrel domain
Protein sequence:
MSSVAITPGCVPLSGWRAILAGAAIRLDESCRPAIARAAEAVAAIVTRAEPVYGINTGFGKLATVRIDAADLATLQRNIVLSHAAGTGEPMPVAVARLMMALKLASLGQGASGVRPETVALLEAMLARGVTPLVPAQGSVGASGDLAPLAHMTAAMIGVGACIDEAGTRIPAAEALSRVGLEPLTLGPKEGLALLNGTQFSTAYALAGLFGAEDLLRAALVAGALSVDAARGSDTPFDPRIHALRRHRGQIETARALRDLLSGSAIRASHLVGDERVQDPYCLRCQPQVMGAALDLLRQAAATLETEANGVSDNPLVFPETGEALSGGNFHAEPVAFAADMIALALCEIGALSERRIALLVDPALSSGLPAFLTPRPGLNSGFMIPQVTAAALVSENKQRAHPASVDSIPTSANQEDHVSMAAHGARRLLPMVENAMAVIAIELLAAAQGCDFLAPLRSSEPLERVRARLRAAVPRLDEDRYFHPDLAAAAALVRGGAVVEAAGVGLPGVSGGVA

Annotated regions:
phrase: GSVGASGDLAPLAHMT
type: ACTIVE_SITE
name: Phe/His_NH3-lyase_AS
description: Phenylalanine/histidine ammonia-lyases, active site
Protein sequence:
MNTLFMHCRPGFEGEVCAEISEHAARLGVAGYAKGKPQSASAEFVCSEEGGAERLMGELRFNQLIFPRQWARGGYVELPESDRISVLLAQLVDFPVFGSLWLEVLDSNEGKELSTFCRKFEVPLRKALEKAGRLVDDPGRPRLLLTFISGRRVFVGVASASNSALWPMGIPRLKFPREAPSRSTLKLEEAWHQFIPREQWEQRLGDDMTGVDLGASPGGWTYQLVRRGMLVTAIDNGPMAESLMDTGLVQHLMADGFTWQPKHPVDWMVCDIVEKPARTTSLIETWLGEGLCREAVVNLKLPMKQRYAEVRRLLDRMEATFKARKIRVSIACKQLYHDREEVTCHLRRLDLKPR

Annotated regions:
phrase: MNTLFMHCRPGFEGEVCAEISEHAARLGVAGYAKGKPQSASAEFVCSEEGGAERLMGELRFNQLIFPRQ
type: DOMAIN
name: RlmM_FDX
description: RlmM ferredoxin-like domain

phrase: SRSTLKLEEAWHQFIPREQWEQRLGDDMTGVDLGASPGGWTYQLVRRGMLVTAIDNGPMAESLMDTGLVQHLMADGFTWQPKHPVDWMVCDIV
type: DOMAIN
name: RNA_MeTrfase_FtsJ_dom
description: Ribosomal RNA methyltransferase, FtsJ domain

phrase: DRISVLLAQLVDFPVFGSLWLEVLDSNEGKELSTFCRKFEVPLRKALEKAGRLVDDPGRPRLLLTFISGRRVFVGV
type: DOMAIN
name: RlmM_THUMP-like
description: Ribosomal RNA large subunit methyltransferase M, THUMP-like domain
Protein sequence:
MIRSVVRGIGSALPKRVMKNTDFEGIVETSDEWIVQRTGIRERHIAGEGETTVSLGAAAARAAIENAGLQPSDIDLVLLATSTPNNTFPASAVAIQRELGITRGFAFDLQAVCSGFIYAITTADLYIRGGMARRVLVIGAETFSHILDWTDRTTCVLFGDGAGAIVLEAAEGHGLTSDRGILAANLRSDGNHKEKLYVDGGPSTTQTVGHLRMEGREVFKHAVGMITDVIEASFEATGLTAEDIDWFVPHQANKRIIDASAKKLHIAEEKVVITVDRHGNTSAASVPLALATAVADGRIKKGDLVLLEAMGGGFTWGAVLVRW

Annotated regions:
phrase: FDLQAVCSGFIYAITTADLYIRGGMARRVLVIGAETFSHILDWTDRTTCVLFGDGAGAIVLEAAEGHGLTSDRGILAANLRSD
type: DOMAIN
name: ACP_syn_III_N
description: Beta-ketoacyl-[acyl-carrier-protein] synthase III, N-terminal

phrase: EATGLTAEDIDWFVPHQANKRIIDASAKKLHIAEEKVVITVDRHGNTSAASVPLALATAVADGRIKKGDLVLLEAMGGGFTWGAVLVR
type: DOMAIN
name: ACP_syn_III_C
description: Beta-ketoacyl-[acyl-carrier-protein] synthase III, C-terminal
Protein sequence:
MAPKAEKKPAAEKKPVETEKKPKAEKRVPGKDGGADKKKKKAKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS

Annotated regions:
phrase: AEKKPAAEKKPVETEKKPKAEKRVPGKDGGADKKKKKAKKSVETYKIYIFKVLKQVHPDIGISSKAMSIMNSFINDIFEKLAGESAKLARYNKKPTITSREIQTAVR
type: DOMAIN
name: Histone_H2A/H2B/H3
description: Histone H2A/H2B/H3

phrase: REIQTAVRLVLPGELAKHAVSE
type: CONSERVED_SITE
name: HISTONE_H2B_site
description: Histone H2B, conserved site
Protein sequence:
MKFIEVHTDGSCLGNPGPGGWAALLRYNGREKELAGGEAVSTNNRMELMAAIMALETLTEPCQIVLHTDSQYVRQGITEWMPGWVRRNWKTAGGDPVKNRELWERLHAATQRHRIDWRWVKGHNGDPDNERVDVLARNQAIAQRDGLATS

Annotated regions:
phrase: IEVHTDGSCLGNPGPGGWAALLRYNGREKELAGGEAVSTNNRMELMAAIMALETLTEPCQIVLHTDSQYVRQGITEWMPGWVRRNWKTAGGDPVKNRELWERLHAATQRHRIDWRWVKGHNGDPDNERVDVLARNQ
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: MKFIEVHTDGSCLGNPGPGGWAALLRYNGREKELAGGEAVSTNNRMELMAAIMALETLTEPCQIVLHTDSQYVRQGITEWMPGWVRRNWKTAGGDPVKNRELWERLHAATQRHRIDWRWVKGHNGDPDNERVDVLARNQA
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain
Protein sequence:
MAIPVVGLTGGIGSGKSAAADRFAELGVPVIDTDSIAHQLTGPGGAAMTEIVRVFGPGVVAGDGSLDRAAMRARVFAAPEERKRLEAILHPAIHAESVRRLQAAVGDYAVLVVPLLFESDRYAPLLARALVVDCSEEVQVERVMRRSKLSADAVRAIMAAQLPRSERLRRADDVIDNSGGLAELRLQVDAKHSYYLANLVKAML

Annotated regions:
Protein sequence:
MKILVPATSANLGPGFDCLGLSLKLFNETQIQKSGVFSISIGGEGSDNIFLKKNNIFVNIFYEIYEKLSGKKDNFRFIFQNNIPLSRGLGSSSAVIVGAIASAYYMSGFKVEKECILDEALIYENHPDNIAPATLGGFVCSLVEKNKVYSIKKEIDKDLAAVVVIPNLAMSTEQSRQALAKNLSFNDAVFNLSHASFLTACFLEKKYEFLKFASQDKLHEINRMKNLPELFEVQKFALENKALMSTLSGSGSSFFSLAFKDDALALAKKIQTKFKDFRVQYLEFDDNGFEIC

Annotated regions:
phrase: IPLSRGLGSSS
type: CONSERVED_SITE
name: GHMP_knse_ATP-bd_CS
description: GHMP kinase, ATP-binding, conserved site

phrase: NIFYEIYEKLSGKKDNFRFIFQNNIPLSRGLGSSSAVIVGAIASAYYMSGFKVEKECILDEALIYENHPDNIAPATLG
type: DOMAIN
name: GHMP_kinase_N_dom
description: GHMP kinase N-terminal domain

phrase: DKLHEINRMKNLPELFEVQKFALENKALMSTLSGSGSSFFSLAFKDDALALAKKIQTKF
type: DOMAIN
name: GHMP_kinase_C_dom
description: GHMP kinase, C-terminal domain
Protein sequence:
MERWWFNSILFKKEFEHRCGLSKSTGSLGPIENTSESEDPNINDMKKNIHSWGGRDNSNYSNVDHLFGVKDIRNFISDETFLVRDSNGNSYSIYFDIENHIFEIDNGHSFQSELESSFYSYQNSSYRNNGSNSDDPHYDHYMYDTQYSWNNNINSCIDNYLQSQIFIETDIVSGSDNYSNSYIYSSICGEIAGSGIRTRTDGSDLTIRESSNDLDVTQKYRHLWVQCENCYGLNYKKSFKSKMNLCEQCGYHLKMSSSDRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRVDSYQRKTGLTEAVQTGIGQLNSIPVAIGVMDFQFMGGSMGSVVGEKITRLIEYATKKFLPLIIVCASGGARMQEGSLSLMQMAKISSALYDYQSNKKLFYVPILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKRVIEQTLNKTVPEGSQAAEYLFQKGLFDLIVPRNPLKSVLSELFQLHAFFPLNQN

Annotated regions:
phrase: LWVQCENCYGLNYKKSFKSKMNLCEQCGYHLKMSSSDRIELLIDPGTWDPMDEDMVSLDPIEFHSEEEPYKDRVDSYQRKTGLTEAVQTGIGQLNSIPVAIGVMDFQFMGGSMGSVVGEKITRLIEYATKKFLPLIIVCASGGARMQEGSLSLMQMAKISSALYDYQSNKKLFYVPILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKRVIEQTLNKTVPEGSQAAEYLFQKGLFDLIVPRNPLKSVLSELFQLHAFFPLNQ
type: DOMAIN
name: COA_CT_N
description: Acetyl-coenzyme A carboxyltransferase, N-terminal

phrase: SLDPIEFHSEEEPYKDRVDSYQRKTGLTEAVQTGIGQLNSIPVAIGVMDFQFMGGSMGSVVGEKITRLIEYATKKFLPLIIVCASGGARMQEGSLSLMQMAKISSALYDYQSNKKLFYVPILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGKRVIEQTLNKTVP
type: DOMAIN
name: AcCoA_carboxyl_beta
description: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta
Protein sequence:
MSDVLPIILSGGSGTRLWPLSRESYPKQFLPLVGEHSMLQATWLRSAPVAAHAPIVVANEEHRFMAAEQLQQLGVKPSAILLEPKGRNTAPAIAVAALEATRNGGDPLLLVLPSDHVIRDEAAFQAAVTVAAAAAEQGKLVTFGIKPTAPETGYGYIKAGVGTGATAVERFVEKPDLATAQGYLASGEYYWNSGMFLFRASRYLEELRKFQPAIADACQKAWEGGKRDADFTRLDKDAFASSPSDSIDYAVMEKTADAVVVPLDAGWNDVGSWSSLLDVSEQDGQGNAHHGDVIQLDCKNTYAYGSRLIAMVGLENVVVVETDDAVLVGHRDRIQEVKEVVSQIKSAGRSEATWHRKVYRPWGAYDSIDMGQRFQVKRITVKPGATLSLQMHHHRAEHWIVVSGTAEVTRGEEVLLLTENQSTYIPLGVTHRLKNPGKLPLELIEVQSGSYLGEDDIVRFEDTYGRT

Annotated regions:
phrase: GDVIQLDCKNTYAYGSRLIAMVGLENVVVVETDDAVLVGHRDRIQEVKEVVS
type: DOMAIN
name: ManC/GMP-like_b-helix
description: MannoseP isomerase/GMP-like, beta-helix domain

phrase: PIILSGGSGTRLWPLSRESYPKQFLPLVGEHSMLQATWLRSAPVAAHAPIVVANEEHRFMAAEQLQQLGVKPSAILLEPKGRNTAPAIAVAALEATRNGGDPLLLVLPSDHVIRDEAAFQAAVTVAAAAAEQGKLVTFGIKPTAPETGYGYIKAGVGTGATAVERFVEKPDLATAQGYLASGEYYWNSGMFLFRASRYLEELRKFQPAIADACQKAWEGGKRDADFTRLDKDAFASSPSDSIDYAVMEKTADAVVVPLDAGWNDVGSWSS
type: DOMAIN
name: GMPP_N
description: GDP-mannose pyrophosphorylase, N-terminal domain

phrase: PIILSGGSGTRLWPLSRESYPKQFLPLVGEHSMLQATWLRSAPVAAHAPIVVANEEHRFMAAEQLQQLGVKPSAILLEPKGRNTAPAIAVAALEATRNGGDPLLLVLPSDHVIRDEAAFQAAVTVAAAAAEQGKLVTFGIKPTAPETGYGYIKAGVGTGATAVERFVEKPDLATAQGYLASGEYYWNSGMFLFRASRYLEELRKFQPAIADACQKAWEGGKRDADFTRLDKDAFASSPSDSIDYAVMEKTADAVVVPLDAGWNDVGSWSSLLDVSEQD
type: DOMAIN
name: NTP_transferase_dom
description: Nucleotidyl transferase domain

phrase: GRSEATWHRKVYRPWGAYDSIDMGQRFQVKRITVKPGATLSLQMHHHRAEHWIVVSGTAEVTRGEEVLLLTENQSTYIPLGVTHRLKNPGKLPLELIEVQSGSYLGEDDIVRFE
type: DOMAIN
name: Man6P_isomerase-2_C
description: Mannose-6-phosphate isomerase, type II, C-terminal
Protein sequence:
MPAKPQVDGHTLVDAFCCANIFTETGALKPRSDKVWMDISNQLKGAISAKTLNFYARINRNNMITVVKERCGIQQLDTSANLTLNSTFPDDDPEFQITEASKNGPLPILYFNLELDLELWRSIAPKKDQKTEKLQPNWTDTMAKLIYKKVPLPCAFNFRKAKLSDKVDNIWLRIEGYCNDCSSILKGHCLVKPDEQCGIMISVSVPDTRGIPHNKKRRCTGSRRLEIGNELILKKAALWRKEATDNMNDDDPEPSYIPNLPTLRKLREEATNRHLGITKDRDPVSSLYLKKYEGELAGCILDIGLDEFFCIYCTGTQVKTYASRIKTIRKISIDATGSVVLPIQKPNGDSSYVFLYQIVMEGDDSIFPVFQMLSAKHDTASIQFWLSRFISKSGHFPLEVVSDFSLALLNGISLSFNECRIATYIKKCFHSLLMEERTDLPPCYIRLDIAHLIKMICRKNVFKSKLPNLKDFYTRCIGLATTCETKDSFAELIKSVLIVALSQSSGEDEKGDILSSYRNEKYLLARIATFTAPDHKETIEDNCIPEDQEEIDEDVTDFISNIKIAAEEEALNCNSVNCRPNPYFLPELMPPLIKLCKYFVLWTNVMKEKFCSKYDVGSSALVEAYFKDLKNTDMSIFHRPVRADKFVVQHIRCIEAVCKLERAAMKRKTVKTPSFIKENAPKKMCSKETKGFLEEILEESEVEYLLQEENWKVKNKTIKPTEGNDAEDNDTDDENKEMDLSEQPKEKPRGKYLKKCPNVELLYNRPHRRKQDEILHNGGSMGPVWIGKQLLQFKNTCPFDSLVEILSTAYIDNFYYKSLLDDFYTDNLTIELVKKYAVEGVSSSLYCDRGLVLKSFFDEKHQIIKCDANIGSFIEKALNGVPSASSHRTHIKNNHDCRNQKYIHHRLEVIDVEKVGHLDVQEVVIPFIDEFFARTDGECKICGGQQILERQPGPHVILDIEFAMDAFHQIHHNGLPGTTTLLQVPEEILIQEKKYILSGAIEYVPAMGGEIGHYIAYCRRVIGSWEVHNDMCRQWKKFSALNTKMTLHILIYTRKN

Annotated regions: