nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MGRLILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAVLNPHTQDVKRVVWHPTKDILASASYDNTIKMFAEEPIDNDWDCTATLTSHTSTVWGIDFDADGERLVSCSDDTTIKIWRAYHPGNTAGVATPDQQTVWKCVCTVSGQHSRAIYDVSWCKLTGLIATACGDDGIRIFKESSDSKPDEPTFEQITAEEGAHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKVTE

Annotated regions:
phrase: LEGHENEVKSVSWSRSGGLLATCSRDKSVWIWE
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWS
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LTSHTSTVWGIDFDADGERLVSCSDDTTIKI
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LATCSRDKSVWIWE
type: CONSERVED_SITE
name: WD40_repeat_CS
description: WD40 repeat, conserved site

phrase: EGAHDQDVNSVQWNPVVAGQLISCSDDGTIKIWKVT
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: DWDCTATLTSHTSTVWGIDFDADGERLVSCSDDTTIKIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: VWKCVCTVSGQHSRAIYDVSWCKLTGLIATACGDDGIRIF
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: RLILEHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: EFECAAVLNPHTQDVKRVVWHPTKDILASASYDNTIKMF
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: EFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: TWSTKTILSDGHKRTIREIRWSPCGQYLASASFDATTAIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: TFEQITAEEGAHDQDVNSVQWNPVVAGQLISCSDDGTIKIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: EHTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: ECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWI
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: DGHKRTIREIRWSPCGQYLASASFDATTAIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: ECAAVLNPHTQDVKRVVWHPTKDILASASYDNTIKM
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: AHDQDVNSVQWNPVVAGQLISCSDDGTIKI
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: DCTATLTSHTSTVWGIDFDADGERLVSCSDDTTIKI
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: WKCVCTVSGQHSRAIYDVSWCKLTGLIATACGDDGIRI
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LATCSRDKSVWIWE
type: REPEAT
name: G-protein_beta_WD-40_rep
description: G-protein beta WD-40 repeat

phrase: LVSCSDDTTIKIWR
type: REPEAT
name: G-protein_beta_WD-40_rep
description: G-protein beta WD-40 repeat

phrase: LISCSDDGTIKIWK
type: REPEAT
name: G-protein_beta_WD-40_rep
description: G-protein beta WD-40 repeat

phrase: SDGHKRTIREIRWSPCGQYLASASFDATTAIWSKSSGEFEC
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LNPHTQDVKRVVWHPTKDILASASYDNTIKM
type: REPEAT
name: WD40_rpt
description: WD40 repeat
Protein sequence:
HASRATDGKKRRKRRKESYGIYIYKVLKQVHPDTGISSRAMSIMNSFVNDVFERIAGEASRLAQYNKKSTISSREVQTAVRLLLPGELAKHAVSEGTKAVTKYTTSK

Annotated regions:
phrase: REVQTAVRLLLPGELAKHAVSE
type: CONSERVED_SITE
name: HISTONE_H2B_site
description: Histone H2B, conserved site

phrase: KKRRKRRKESYGIYIYKVLKQVHPDTGISSRAMSIMNSFVNDVFERIAGEASRLAQYNKKSTISSREVQTAVR
type: DOMAIN
name: Histone_H2A/H2B/H3
description: Histone H2A/H2B/H3
Protein sequence:
MEAERRCQAEKPKKGRVGSSLLPERHPATGTLTTMVDSSAPPCRRLPGAGGGRSRFSPQGGQRGRPHSRRRHRTTFSPVQLEQLESAFGRNQYPDIWARESLARDTGLSEARIQVWFQNRRAKQRKQECSLLQPLAHLSPAAFSSFLPESTACPYSYAPPPPVTCFPHPYSHALPSQPSTGGAFALSHQSEDWYPTLHPAPAGHLPCPPPPPMLPLSLEPSKSWN

Annotated regions:
phrase: RRHRTTFSPVQLEQLESAFGRNQYPDIWARESLARDTGLSEARIQVWFQNRRAKQR
type: DOMAIN
name: HD
description: Homeodomain

phrase: RRRHRTTFSPVQLEQLESAFGRNQYPDIWARESLARDTGLSEARIQVWFQNRRAKQRKQECS
type: DOMAIN
name: HD
description: Homeodomain

phrase: HSRRRHRTTFSPVQLEQLESAFGRNQYPDIWARESLARDTGLSEARIQVWFQNRRAKQRK
type: DOMAIN
name: HD
description: Homeodomain

phrase: LARDTGLSEARIQVWFQNRRAKQ
type: CONSERVED_SITE
name: Homeobox_CS
description: Homeobox, conserved site

phrase: RRHRTTFSPVQLEQLESAFGRNQYPDIWARESLARDTGLSEARIQVWFQNRRAKQRKQ
type: DOMAIN
name: HD
description: Homeodomain

phrase: ARESLARDT
type: CONSERVED_SITE
name: HTH_motif
description: Helix-turn-helix motif

phrase: GLSEARIQVWFQNRRA
type: CONSERVED_SITE
name: HTH_motif
description: Helix-turn-helix motif
Protein sequence:
MATAEMEKTTTFDEAEKVKLNANEADDEVEEGEIVEETDDTTSYLSKEIATKHPLEHSWTFWFDNPVAKSKQAAWGSSLRNVYTFSTVEDFWGAYNNIHHPSKLVVGADLHCFKHKIEPKWEDPVCANGGTWKMSFSKGKSDTSWLYTLLAMIGHQFDHEDEICGAVVSVRGKGEKISLWTKNAANETAQVSIGKQWKQFLDYSDSVGFIFHDDAKRLDRNAKNRYTV

Annotated regions:
Protein sequence:
MVREGEERIGNRVLLGVIGVSYRETTLQQREQVLHILQQAQGSFRPEVFQEERDYVLLATCHRVELYSVAPAELFDSLAQEIKLLGVSPYFYRNQDCFAHLFCVAGGLDSLVLGETEIQGQVKRAYLQAAREQKLSFALHFLFQKALKEGKVFRAKGGAPYAAITIPILVDQELRRRQIDKKASLLFIGYSEINRSVAYHLRRQGFSCITFCSRQQLPTLSMRQVVREELCFQDPYRVVFLGSLELQYALPHSLWESIWDIPDRIVFDFAVPRALPSHTVFPHRYMDMDQISDWLREHRKEVNSAHLDSLREVAYRYWNSLNQRLERHDCVGANA

Annotated regions:
phrase: IGVSYRETTLQQREQVLHILQQAQGSFRPEVFQEERDYVLLATCHRVELYSVAPAELFDSLAQEIKLLGVSPYFYRNQDCFAHLFCVAGGLDSLVLGETEIQGQVKRAYLQAAREQKLSFALHFLFQKALKEGKVFR
type: DOMAIN
name: 4pyrrol_synth_GluRdtase_N
description: Glutamyl-tRNA reductase, N-terminal

phrase: HLFCVAGGLDSLVLGETEIQGQV
type: CONSERVED_SITE
name: GluRdtase_CS
description: Glutamyl-tRNA reductase, conserved site
Protein sequence:
MSAPLGPRGRPAPTPAASQPPPQPEMPDLSHLTEEERKIIQAVMDRQKKEEEKEQSVLKKLHQQFEMYKEQVKKMGEESQQQQEQKGDAPTCGICHKTKFADGCGHNCSYCQTKFCARCGGRVSLRSNKVMWVCNLCRKQQEILTKSGAWFYNSGSNTPQQPDQKALRGLRSEEAPQEKKAKLHEQTQFQGPPGDSSVPAVERGRAHGLTRQDSIKNGSGMKHQIASDMPSDRKRSPSVSRDQNRRYDQSEEREEYSQYVPSDSTMPRSPSDYADRRSQREPQFYEEPDHLNYRDSNRRGHRHSKEYIVDDEDVESRDEYERQRREEEYQARYRSDPNLARYPVKPQPYEEQMRIHAEVSRARHERRHSDVSLANAELEDSRISLLRMDRPSRQRSVSERRAAMENQRSYSMERTREAQGQSSYPQRTTNHSPPTPRRSPIPLDRPELRRADSLRKQHHLDPSSAVRKTKREKMETMLRNDSLSSDQSESVRPPPPRPHKSKKGGKMRQVSLSSSEEELASTPEYTSCDDVEIESESVGEKGDMEYSWLEHASWHSSEASPMSLHPVTWQPSKDGDRLIGRILLNKRLKDGSVPRDSGAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRPIGDMPRIPDSTHAQLESSSSSFESQKMDRPSISVTSPMSPGMLRDVPQFLSGQLSSQSLSRRTTPFVPRVQIKLWFDKVGHQLIVTILGAK

Annotated regions:
phrase: KGDAPTCGICHKTKFADGCGHNCSYCQTKFCARCGGRVSLRSNKVMWVCNLCRKQQ
type: DOMAIN
name: Znf_FYVE-rel
description: Zinc finger, FYVE-related

phrase: DGSVPRDSGAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVS
type: DOMAIN
name: PDZ
description: PDZ domain

phrase: VPRDSGAMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELV
type: DOMAIN
name: PDZ
description: PDZ domain

phrase: AMLGLKVVGGKMTESGRLCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRP
type: DOMAIN
name: PDZ
description: PDZ domain

phrase: MPDLSHLTEEERKIIQAVMDRQKKEEEKEQSVLKKLHQQFEMYKEQVKKMGEESQQQQEQKGDAPTCGICHKTKFADGCGHNCSYCQTKFCARCGGRVSLRSNKVMWVCNLCRKQQEILTKSGAWFYN
type: DOMAIN
name: Rab_BD
description: Rab-binding domain

phrase: CGICHKTKFADGCGHNCSYCQTKFCARCGGRVSLRSNKVMWVCNLCRK
type: DOMAIN
name: RIM_Znf
description: RIM, zinc finger
Protein sequence:
MQYKTKAKKSLGQNFLQDENIIRKIVQLANIKKHDIVVEIGPGLGALTRYLLSSSNNVSVVEFDASVIDTLIANCQKYGTPHIYNQDFLKFDISSLENSSNQKIKLIGNLPYNISSPILFKVIKDSDKIVDAHFMLQKEVVERIVSLPNSKSYGRLSVILQYHFDCSMILKIPPEVFYPQPKVDSAILRLKPKNSKELLKNYNFFEEIVKQSFAQRRKTLHNNLKSILKERKIDPSTLPVDTNLRAENLSVGDFVSLANFLS

Annotated regions:
phrase: VVEIGPGLGALTRYLLSSSNNVSVVEF
type: CONSERVED_SITE
name: rRNA_Ade_Mease_Trfase_CS
description: Ribosomal RNA adenine methylase transferase, conserved site

phrase: IIRKIVQLANIKKHDIVVEIGPGLGALTRYLLSSSNNVSVVEFDASVIDTLIANCQKYGTPHIYNQDFLKFDISSLENSSNQKIKLIGNLPYNISSPILFKVIKDSDKIVDAHFMLQKEVVERIVSLPNSKSYGRLSVILQYHFDCSMILKIPPEVFYPQPKVDSAILRLKPK
type: DOMAIN
name: rRNA_Ade_methylase_Trfase_N
description: Ribosomal RNA adenine methylase transferase, N-terminal
Protein sequence:
MSKKDTEHDDDFALFKDAVQGVKKLRQDTIIQQPKKNTKQKEITRSNREASDSEFYFSDEFVPLLNADGPTRYARDDVSTYEVKRLRRGVYVPDVFLDMHGMTQQEAKRELGAMIAYCVKNEIHCACVQHGIGKHILKQKAPLWLAQHPDVMAFHQAPLEFGGDGALLVLLSIPEK

Annotated regions:
phrase: DVFLDMHGMTQQEAKRELGAMIAYCVKNEIHCACVQHGIGKHILKQKAPLWLAQHPDVMAFHQAPLEFGGDGALLVLL
type: DOMAIN
name: Smr_dom
description: Smr domain

phrase: LDMHGMTQQEAKRELGAMIAYCVKNEIHCACVQHGIGKHILKQKAPLWLAQHPDVMAFHQAPLEFGGDGALLVLL
type: DOMAIN
name: Smr_dom
description: Smr domain

phrase: LDMHGMTQQEAKRELGAMIAYCVKNEIHCACVQHGIGKHILKQKAPLWLAQHPDVMAFHQAPLEFGGDGALLVL
type: DOMAIN
name: Smr_dom
description: Smr domain
Protein sequence:
MKALSKLKAEKGIWLVDAPKPEMGHNDLLIKIKKTAICGTDMHIYNWDEWSQKTIPVPMVVGHEYVGEVVDIGQEVRGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVGVNREGSFAEYLVIPAFNAFKIPDDISDDLASIFDPFGNAVHTALSFDLVGEDVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLELARKMGATRAVNVAQESLKDVMKELGMTEGFDVGLEMSGVPSAFHAMLDTMNHGGKIAMLGIPGGEMAIDWSKVIFKGLVIKGIYGREMFETWYKMASLIQSGLDISPIITHHYKIDDFQKGFDAMGSGQSGKVILSWD

Annotated regions:
phrase: PIGIMAAAVCRHVGARHVVITDVNEYRLELARKMGATRAVNVAQESLKDVMKELGMTEGFDVGLEMSGVPSAFHAMLDTMNHGGKIAMLGIPGGEMAIDWSKVIFKGLVIKGIYGREMFETWYKMASLI
type: DOMAIN
name: ADH-like_C
description: Alcohol dehydrogenase-like, C-terminal

phrase: HNDLLIKIKKTAICGTDMHIYNWDEWSQKTIPVPMVVGHEYVGEVVDIGQEVRGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVGVNREGSFAEYLVIPAFNAFKIP
type: DOMAIN
name: ADH-like_N
description: Alcohol dehydrogenase-like, N-terminal

phrase: GIWLVDAPKPEMGHNDLLIKIKKTAICGTDMHIYNWDEWSQKTIPVPMVVGHEYVGEVVDIGQEVRGFKIGDRVSGEGHITCGHCRNCRAGRTHLCRNTSGVGVNREGSFAEYLVIPAFNAFKIPDDISDDLASIFDPFGNAVHTALSFDLVGEDVLITGAGPIGIMAAAVCRHVGARHVVITDVNEYRLELARKMGATRAVNVAQESLKDVMKELGMTEGFDVGLEMSGVPSAFHAMLDTMNHGGKIAMLGIPGGEMAIDWSKVIFKGLVIKGIYGREMFETWYKMASLIQSGLDISPIITHHYKIDDFQKGFDAMGSGQSGKVI
type: DOMAIN
name: PKS_ER
description: Polyketide synthase, enoylreductase domain

phrase: GHEYVGEVVDIGQE
type: CONSERVED_SITE
name: ADH_Zn_CS
description: Alcohol dehydrogenase, zinc-type, conserved site
Protein sequence:
MTRTLPAGLTVTARVPASSANLGPGFDSLGMALGIYDEIEVRTTDSGLTIRVEGEGADDVPWGPSHLVVRAIERGLEHAGVWADGLDVVCRNVIPHSRGLGSSASAVVGGLAAGCALAAKLDESLATAADELVQLASEFEGHPDNAAASVLGGIVVSWTETSAEAQAEVPDHGRVYRAVRLDPHPTLRPVVLIPEVRSSTAHTRGLLPESVPHGDAAFNVSRAALAVVALTTRPDLLMPATADRLHQAQRAPALPLTTRWIDRLRAAGIPATVSGAGPTVLALGTGEFPAELRALAAEEGLRVVEPGLAEGVLVD

Annotated regions:
phrase: LVVRAIERGLEHAGVWADGLDVVCRNVIPHSRGLGSSASAVVGGLAAGCALAAKLDESLATAADELVQLASEFEGHPDNAAASVLG
type: DOMAIN
name: GHMP_kinase_N_dom
description: GHMP kinase N-terminal domain

phrase: ADRLHQAQRAPALPLTTRWIDRLRAAGIPATVSGAGPTVLALGTGEFP
type: DOMAIN
name: GHMP_kinase_C_dom
description: GHMP kinase, C-terminal domain

phrase: IPHSRGLGSSA
type: CONSERVED_SITE
name: GHMP_knse_ATP-bd_CS
description: GHMP kinase, ATP-binding, conserved site
Protein sequence:
MATILIVVLLLASIGVGYGLRAKKHSETLAQARKAAEKIIEHERQKTKAEVAEYEKNSVQETQQYQETIDQELADDLHDNQRKEAWIEQRMNLLNQKKIVLTNRADALAKKRQSLLQERDNVRTTLGEAKQLITDRWNKLQEVADLEEQAASKLVLKETKQDAIRSKDEFVNNAQTELESSCEREAEDLIALAMEHSDVPRGQAENHRSFIAENAEYLGKLIGNSGQNVRAIEALTGVDIVIDDQEKEVILNGYDPVRRAVAMETMEMIKTEKRVVPDTIERLVNKANKVIDQRIRQYGEDAVRELKLKYVAPDLIKFIGRMHYRTSYGQNILEHSIETAKLAGIFAVELGEDATLARRAGLLHDIGKSIDRDIEATHVELGVELTTKYRESPVIVNTIASHHGDVEARYVIANLVEAADAISGARQGARSESVADYIQRIKSLEEIANKHPEVKESYAIQAGRELRVIVQPKETDDKTIHSLATNVKNQIEEDVTYPGQVKVTVVRKLEIVEYVEKKQA

Annotated regions:
phrase: AEYLGKLIGNSGQNVRAIEALTGVDIVIDDQEKEVILNGYDPVRRAV
type: DOMAIN
name: KH_dom_type_1
description: K Homology domain, type 1

phrase: LEHSIETAKLAGIFAVELGEDATLARRAGLLHDIGKSIDRDIEATHVELGVELTTKYRESPVIVNTIASHHGDVEARYVIANLVEAADAI
type: DOMAIN
name: HD_domain
description: HD domain

phrase: YGQNILEHSIETAKLAGIFAVELGEDATLARRAGLLHDIGKSIDRDIEATHVELGVELTTKYRESPVIVNTIASHHG
type: DOMAIN
name: HDIG_dom
description: HDIG domain

phrase: QNILEHSIETAKLAGIFAVELGEDATLARRAGLLHDIGKSIDRDIEATHVELGVELTTKYRESPVIVNTIASHHGDVEARYVIANLVEAADAISGARQGARSESV
type: DOMAIN
name: HD/PDEase_dom
description: HD/PDEase domain

phrase: ILEHSIETAKLAGIFAVELGEDATLARRAGLLHDIGKSIDRDIEATHVELGVELTTKYRESPVIVNTIASHHGDVEARYVIANLVEAADAISG
type: DOMAIN
name: HD_domain
description: HD domain

phrase: YGQNILEHSIETAKLAGIFAVELGEDATLARRAGLLHDIGKSIDRDIEATHVELGVELTTKYRESPVIVNTIASHHGDVEARYVIANLVEAADAISGARQGARSES
type: DOMAIN
name: HD/PDEase_dom
description: HD/PDEase domain

phrase: ATILIVVLLLASIGVGYGLRAKKHSETLAQARKAAEKIIEHERQKTKAEVAEYEKNSVQETQQYQETIDQELADDLHDNQRKEAWIEQRMNLLNQKKIVLTNRADALAKKRQSLLQERDNVRTTLGEAKQLITDRWNKLQEVADLEEQAASKLVLKETKQDAIRSKDEFVNNAQTELESSCEREAEDLIALAME
type: DOMAIN
name: RNase_Y_N
description: Ribonuclease Y, N-terminal
Protein sequence:
MSKITEQVEVIVQPIMEDLNFELVDVEYVKEGRDHFLRISIDKEGGVDLNDCTLASEKISEAMDANDPIPEMYYLDVASPGAERPIKKEQDFQNAITKPVFVSLYVPIEGEKEWLGILQEVNNETIVVQVKIKARTKDIEIPRDKIAKARHAVMI

Annotated regions:
phrase: IKKEQDFQNAITKPVFVSLYVPIEGEKEWLGILQEVNNETIVVQVKIKARTKDIEIPRDKIAKARH
type: DOMAIN
name: RimP_C
description: Ribosome maturation factor RimP, C-terminal

phrase: IVQPIMEDLNFELVDVEYVKEGRDHFLRISIDKEGGVDLNDCTLASEKISEAMDANDPIPEMYYLDVASPGA
type: DOMAIN
name: RimP_N
description: Ribosome maturation factor RimP, N-terminal

phrase: GAERPIKKEQDFQNAITKPVFVSLYVPIEGEKEWLGILQEVNNETIVVQVKIKARTKDIEIPRDKIAKARHA
type: DOMAIN
name: RimP_C
description: Ribosome maturation factor RimP, C-terminal
Protein sequence:
MRTIALLLAYDGTDFAGSQWQTDIRTVQGALESAWEALTQERRRIVLAGRTDAGVHATGQVAHVQTTTRHNLQTIWRGLNAHLPVDLAIQNVGEAVPDFHARFSAIQREYRYLIDCAAAPLPQLRHQVLHYAGTLDVAAMTAALKLLEGTHDFAAFTTATPAQRSTVRTMYWTRVGDYEWFERRLLAIEVAANAFLQHMVRMIVGTLLLVGRGRMTVDQFGEVLASRDRRLAGPTAPAHGLTLTAVRYPPGLIRWVEPSKRQNGTTKVEQPSSYVHEE

Annotated regions:
phrase: AYDGTDFAGSQWQTDIRTVQGALESAWEALTQERRRIVLAGRTDAGVHATGQVAHVQTTTRHNLQTIWRGLNAHLPVDLAIQNVGEAVPDFHAR
type: DOMAIN
name: PsdUridine_synth_TruA_a/b_dom
description: Pseudouridine synthase I, TruA, alpha/beta domain

phrase: ALKLLEGTHDFAAFTTATPAQRSTVRTMYWTRVGDYEWFERRLLAIEVAANAFLQHMVRMIVGTLLLVGRGRMTVDQFGEVLASRDRRLAGPTAPAHGLTLTAVRY
type: DOMAIN
name: PsdUridine_synth_TruA_a/b_dom
description: Pseudouridine synthase I, TruA, alpha/beta domain
Protein sequence:
MKPTVWHHLRLCPHGHPDETIDDAAIAVDETGTIAWLGALSALPHGYAHWRREDLHGAWVTPGLVDCHTHLVYGGTRADEFAQRLAGVSYEEIARQGGGIVSTVRATRAADETTLFVQAAARLQPLLAEGVTAIEIKSGYGLDLASERKMLRVARQLGERFPVTVHTTFLGAHALPPEYAGRADAYIDEVCDRMLPTLADEGLVDAVDVFCERIGFSLAQTERVFEAATRRGLPVKLHAEQLSNAGGTALAARYRALSADHLEFLDEAGIEAMKAAGTVAVLLPGAYYFIRETQLPPIELLRKHGVPIALATDHNPGTSPLESLLLTLNMGCTLFRMTVPEVLQGVTRHAAAALGRADRHGALEVGRQADFAVWSVGSLAELAYWIGRPLCEQVVRGGTTVFRRMNG

Annotated regions:
phrase: WVTPGLVDCHTHLVYGGTRADEFAQRLAGVSYEEIARQGGGIVSTVRATRAADETTLFVQAAARLQPLLAEGVTAIEIKSGYGLDLASERKMLRVARQLGERFPVTVHTTFLGAHALPPEYAGRADAYIDEVCDRMLPTLADEGLVDAVDVFCERIGFSLAQTERVFEAATRRGLPVKLHAEQLSNAGGTALAARYRALSADHLEFLDEAGIEAMKAAGTVAVLLPGAYYFIRETQLPPIELLRKHGVPIALATDHNPGTSPLESLLLTLNMGCTLFRMTVPEVLQGVTRHAAAALGRADRHGALEVGRQADFAVWSVGSLAELAYWIG
type: DOMAIN
name: Amidohydro-rel
description: Amidohydrolase-related
Protein sequence:
MSRYRGPRFKKIRRLGALPGLTSKKPRSASDLRNQSRSGKRSQYRIRLEEKQKLRFHYGLTERQLLRYVRIAGKANGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHGHILVNGRLVDIPSYRCKPRDIITTKDKQGSRALIQNHMDSSSNAELPKHLTLHSFQYKGVVNQIIDSKWVGLKVNELLIVEYYSRQT

Annotated regions:
phrase: RYRGPRFKKIRRLGALPGLTSKKPRSASDLRNQSRSGKRSQYRIRLEEKQKLRFHYGLTERQLLRYVRIAGKANGSTGQVLLQLL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: RYRGPRFKKIRRLGALPGLTSKKPRSASDLRNQSRSGKRSQYRIRLEEKQKLRFHYGLTERQLLRYVRIAGKANGSTGQVLLQLL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: MRLDNILFRLGMASTIPGARQLVNHGHILVNGRLVDIPSYRCKPRDIITTKDKQGSRAL
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: LEMRLDNILFRLGMASTIPGARQL
type: CONSERVED_SITE
name: Ribosomal_uS4_CS
description: Small ribosomal subunit protein uS4, conserved site

phrase: MRLDNILFRLGMASTIPGARQLVNHGHILVNGRLVDIPSYRCKPRDI
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain
Protein sequence:
MIHGIGVDLIEISRIKNLYKRQSKLVDRILTINEQHKFNQFNNEQRKMEFLAGRFATKEAFSKALGSGLGKTVSFTDIDCVNDEDGKPCIHYEGYKVHVSISHTEHYAMSQVILEV

Annotated regions:
phrase: MIHGIGVDLIEISRIKNLYKRQSKLVDRILTINEQHKFNQFNNEQRKMEFLAGRFATKEAFSKALGSGLGKTVSFTDIDCVNDEDGKPCIHYEGYKVHVSISHTEHYAMSQVIL
type: DOMAIN
name: Ppantetheine-prot_Trfase_dom
description: Phosphopantetheine-protein transferase domain

phrase: GIGVDLIEISRIKNLYKRQSKLVDRILTINEQHKFNQFNNEQRKMEFLAGRFATKEAFSKALGSGLGKTVSFTDIDCVNDEDGKPCIHYEGYKVHVSISHTEHY
type: DOMAIN
name: 4-PPantetheinyl_Trfase_dom
description: 4'-phosphopantetheinyl transferase domain
Protein sequence:
MTILLATRNAGKLVEFRRLLTGLEVVGLADVPEFPEAPETGATFAENALAKARDAAAATGLPSVADDSGLAVDALNGMPGVLSARWSGKHGDDLANLNLLLGQLGDVPDERRGGAFICAAALVMPGGRETVVHGEWRGRIIREPRGTNGFGYDPIFVPDGETRTSAELSPAEKDAASHRGLAFRALLPYL

Annotated regions:
Protein sequence:
MKKRVIAVSAIALASVAVLAGCRSHDASGTSGKVKTDLKAAIVTDANGVNDRSFNQSAWEGLQSWGKENNLKKGTGYTYFQSNSASDYTTNYNSAEQQGYKLLFGIGFSLQDATSAAAKNNPKSNFVIVDSVIKDQKNVTSATFADNESAYLAGVAAAKATKTNKIGFIGGMQSDVITRFEKGYVAGAKSVKSDIKVDIQYAGSFSDAAKGKTIAAAMYGSGDDVVYQCAGGVGTGVFSEAKALNSSKNEADKVWVIGVDQDQEYLGKYKSKDGKDSNFVLVSTIKEVGTVVKDIADKTKDGKFPGGTIVTYNLKNGGVDLGLDNATSEIKDAVAKAKTDIIDGKITVPSK

Annotated regions:
phrase: AIVTDANGVNDRSFNQSAWEGLQSWGKENNLKKGTGYTYFQSNSASDYTTNYNSAEQQGYKLLFGIGFSLQDATSAAAKNNPKSNFVIVDSVIKDQKNVTSATFADNESAYLAGVAAAKATKTNKIGFIGGMQSDVITRFEKGYVAGAKSVKSDIKVDIQYAGSFSDAAKGKTIAAAMYGSGDDVVYQCAGGVGTGVFSEAKALNSSKNEADKVWVIGVDQDQEYLGKYKSKDGKDSNFVLVSTIKEVGTVVKDIADKTKDGKFPGGTIVTYNLKNGGVDLGLDNATSEIKDAVAKAKTDIIDGKITVP
type: DOMAIN
name: PnrA-like
description: ABC transporter substrate-binding protein PnrA-like
Protein sequence:
MSLLIIERGCPNCGGAISDERLSKGLPCSKCLPKPEEEVCEALEKLNKLRELKPYCETDRRLGEFESFFERAVGARPWSLQRLWAKRVLRKESFAIVAPTGVGKTTFGFVTSLFLEPKALLIFPTKLLANQAGERLRELSQRLGLEKRILVYESKKKVKEQFLSGGFDILCGTNMFLHRNFENLMNFRFKFIFIDDIDSFLKRSKNVDNLFKLLGFTDYEIKLALKENKTEKDWDRLSQIRKRERDTVLIVSSATLKPKGNRVFLFRNLLGFDVQKAVTTVRNIVDVAEPAKDLEDALGRSAELIKKLGKGGLVYLSVFYGKDKVEEVVEFYRKGGIKAINYLDYKAEELYKTLEKGEFDVAMGISHITNPLVRGLDLPHVIRYAIFLDPPKHVFPTELTLQPSLLHSMLLALLNLFEEEDRLKAIEYINYLKRYLTMRDEDLDKYPRIKERVQEIKDFLEGFLTDREFLKKIEESEDISLVHRDGQLFVVVGDANSYIQASGRTSRFIAGGMTKGLSILFYSDPKAFRSLKRRLAAYFMQSDVEFKSLEEIDLEKLIKEIDEDRGRARLILEHKVAQKIKDLFKTTLVVVESPNKAKTIASFFGKPQMRLVKDTIAYEVPLGERLLVITASLGHVLDLVTDKGFFGVLEDRDRFIPVYDTIKRCKPQGIQHTDYEYLKERCRGKIEDKLTIIEGLREVDYEVDEVFIATDPDAEGEKIAYDLFLLLRPFNVNLKRAEFHEVTPRAFQEAVESPRDFNVNMVKAQIVR

Annotated regions:
phrase: TTLVVVESPNKAKTIASFFGKPQMRLVKDTIAYEVPLGERLLVITASLGHVLDLVTDKGFFGVLEDRDRFIPVYDTIKRCKPQGIQHTDYEYLKERCRGKIEDKLTIIEGLREVDYEVDEVFIATDPDAEGEKIAYDLFLLLRPFN
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: LQRLWAKRVLRKESFAIVAPTGVGKTTFGFVTSLFLEPKALLIFPTKLLANQAGERLRELSQRLGLEKRILVYESKKKVKEQFLSGGFDILCGTNMFLHRNFENLMNFRFKFIFIDDIDSFLKRSKNVDNLFKLLGFTDYEIKLA
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: MSLLIIERGCPNCGGAISDERLSKGLPCSKCLPKPEEEVCEALEKLN
type: DOMAIN
name: Znf_Rg
description: Reverse gyrase, zinc finger

phrase: TTLVVVESPNKAKTIASFFGKPQMRLVKDTIAYEVPLGERLLVITASLGHVLDLVTDKGFFGVLEDRDRFIPVYDTIKRCKPQGIQHTDYEYLKERCRGKIEDKLTIIEGLREVDYEVDEVFIATDPDAEGEKIAYDLFLLLRPFNVNLKRAEFHE
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: TLVVVESPNKAKTIASFFGKPQMRLVKDTIAYEVPLGERLLVITASLGHVLDLVTDKGFFGVLEDRDRFIPVYDTIKRCKPQGIQHTDYEYLKERCRGKIEDKLTIIEGLREVDYEVDEVFIATDPDAEGEKIAYDLFLLLRPFNVNLKRAEFH
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: VGARPWSLQRLWAKRVLRKESFAIVAPTGVGKTTFGFVTSLFLEPKALLIFPTKLLANQAGERLRELSQRLGLEKRILVYESKKKVKEQFLSGGFDILCGTNMFLHRNFENLMNFRFKFIFIDDIDSFLKRSKNVDNLFKLLGFTDYEIKLALKENKTEKDWDRLSQIRKRERDTVLIVSSATLKPKGNRVFLFRNLLGFDVQKAVTTVRNIVD
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: TTLVVVESPNKAKTIASFFGKPQMRLVKDTIAYEVPLGERLLVITASLGHVLDLVTDKGFFGVLEDRDRFIPVYDTIKRCKPQGIQHTDYEYLKERCRGKIEDKLTIIEGLREVDYEVDEVFIATDPDAEGEKIAYDLFLLLRPFNVNLKRAEFHEVTPRAFQEAVES
type: DOMAIN
name: TOPRIM_RevGyr
description: Reverse gyrase, TOPRIM domain

phrase: AKRVLRKESFAIVAPTGVGKTTFGFVTSLFLEPKALLIFPTKLLANQAGERLRELSQRLGLEKRILVYESKKKVKEQFLSGGFDILCGTNMFLHRNFENLMNFRFKFIFIDDIDSFLKRSKNVDNLFKLLGFTDYEIKLALKENKTEKDWDRLSQIRKRERDTVLIVSSATLKPKGNRVFLFRNLLGFD
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain
Protein sequence:
MNSCHPPQDEMAGLIGIYAFQGFYGLLSVVVYTFNIRALRHHKNNLDKSFSLLYTCCAALSLTYFLDHFLIRRFVKLGFFCEIILENFGEPNYWMMPYKTIASYCPIAILVFHALIAAHRFSIVAAPMRGVQLWDRYRRLFVLVGFLIPLIFMWFMIPCKSYAELDSEGSGGLDIEYKKVFSISSSLAAAIAAVLFGVLTLCLTFGMLIALAKLSLRKLSQAEISLIVFEVFMTVFTLIYAFTQGILYYSIYIVKDMELKSTVIQFRTFAIDIFILPQAWTLLFLSTTVRRYTLRAFGKRLGVEFLSTEIEKSARMVSVAPATISLQKSTVLNYNFTLQNLF

Annotated regions:
Protein sequence:
MHGEHDRGGVIIKVCDDVLALAGKHERAINLTKLDNTLEQHTPMMRQYLGIKAQYPDMLVFYRMGDFYELFHDDAEKASRLLGITLTKRGSSNGEPIRMAGVPYHAAEQYLAKLAKLGEAVAICEQVGDPAKSKGPVERQVTRILTPGTLTDAALLDDTRDNLLLAIAHGEGVLGLARINLASGRFILSEITPGLLAQELERISPAEILYPDDFYHMALEQVKCPKKRLAPWQFDLDSSIQTLTKQFSTYDLDGFGCAHMLAAIMAAGALLDYVKHTQRTSLPHIQSLMVEQGSQFIQLDAATRRNLEIDQTLRGESSPTLYSLLNTTVTAMGARLLRSWLHHPLQHQADIQARLQAVKVLQAQYDGLRPLLRNVGDIERMAARVALKTARPRDLSGLRDSLQQLPALQRVLRPEDSALLHSLQQQLDVPQAALDMLIAAIKDEPAAVLREGGVIADGFDAELDELRAIQSNCGEFLLQFEAQERERSGISNLKVEYNSVHGFYIEISRAQSENVPAEYRRRQTLKNVERYITPELKTFEDKVLSANERALAREKFLFDELLGNLQPALAAWQRNAEAVAQLDVLATFAERADVLKYVAPQFSSEAGLDIVDGRHPVVEQLAQPFIANSVSLSPYRQLLLITGPNMGGKSTYMRQTALIVLLAHCGCFVPAKSARIGPIDRIFTRIGASDDLAGGRSTFMVEMTETANILHNATERSLVLLDEIGRGTSTFDGLSLAWAVARQLLEKNRSYTLFATHYFELTRISEEFKHAANVHLDAVEHGDGIVFLHNVEEGPASQSYGLQVAQLAGIPRTVVNAAKRKLVQLEQSQVMQQSLAGQGDMFVAANVEPEPATHPVVSELESIDPDSLTPRQALDVLYKLKKLI

Annotated regions:
phrase: NLLLAIAHGEGVLGLARINLASGRFILSEITPGLLAQELERISPAEILYPDDFYHMALEQVKCPKKRLAPWQFDLDSSIQTLTKQFSTYDLDGFGCAHMLAAIMAAGALLDYVKHTQRTSLPHI
type: DOMAIN
name: DNA_mmatch_repair_MutS_con_dom
description: DNA mismatch repair protein MutS, connector domain

phrase: SLVLLDEIGRGTSTFD
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: TPMMRQYLGIKAQYPDMLVFYRMGDFYELFHDDAEKASRLLGITLTKRGSSNGEPIRMAGVPYHAAEQYLAKLAKLGEAVAICEQVGDPAKSKGPVERQVTRILTPGTLTD
type: DOMAIN
name: DNA_mismatch_repair_MutS-lik_N
description: DNA mismatch repair protein MutS-like, N-terminal

phrase: ESSPTLYSLLNTTVTAMGARLLRSWLHHPLQHQADIQARLQAVKVLQAQYDGLRPLLRNVGDIERMAARVALKTARPRDLSGLRDSLQQLPALQRVLRPEDSALLHSLQQQLDVPQAALDMLIAAIKDEPAAVLREGGVIADGFDAELDELRAIQSNCGEFLLQFEAQERERSGISNLKVEYNSVHGFYIEISRAQSENVPAEYRRRQTLKNVERYITPELKTFEDKVLSANERALAREKFLFDELLGNLQPALAAWQRNAEAVAQLDVLATFAERADVLKYVAPQFSSEAGLDIVDGRHPVVEQ
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: RQLLLITGPNMGGKSTYMRQTALIVLLAHCGCFVPAKSARIGPIDRIFTRIGASDDLAGGRSTFMVEMTETANILHNATERSLVLLDEIGRGTSTFDGLSLAWAVARQLLEKNRSYTLFATHYFELTRISEEFKHAANVHLDAVEHGDGIVFLHNVEEGPASQSYGLQVAQLAGIPRTVVNAAKRKL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: ATRRNLEIDQTLRGESSPTLYSLLNTTVTAMGARLLRSWLHHPLQHQADIQARLQAVKVLQAQYDGLRPLLRNVGDIERMAARVALKTARPRDLSGLRDSLQQLPALQRVLRPEDSALLHSLQQQLDVPQAALDMLIAAIKDEPAAVLREGGVIADGFDAELDELRAIQSNCGEFLLQFEAQERERSGISNLKVEYNSVHGFYIEISRAQSENVPAEYRRRQTLKNVERYITPELKTFEDKVLSANERALAREKFLFDELLGNLQPALAAWQRNAEAVAQLDVLATF
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: LITGPNMGGKSTYMRQTALIVLLAHCGCFVPAKSARIGPIDRIFTRIGASDDLAGGRSTFMVEMTETANILHNATERSLVLLDEIGRGTSTFDGLSLAWAVARQLLEKNRSYTLFATHYFELTRISEEFKHAANVHLDAVEHGDGIVFLHNVEEGPASQSYGLQVAQLAGIPRTVVNAAKRKLVQL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: GFDAELDELRAIQSNCGEFLLQFEAQERERSGISNLKVEYNSVHGFYIEISRAQSENVPAEYRRRQTLKNVERYITPELKTFEDKVLSANE
type: DOMAIN
name: DNA_mismatch_repair_MutS_clamp
description: DNA mismatch repair protein MutS, clamp