nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MAKLTVEDLDLAGKKVLMRVDFNVPIKDGVVGDDNRIVAALPTIKYVLDHQGKAILFSHLGRIKKEDDKPGLSMRPVAERLSNLLNMPVTFVPVTEGPQLEDAIAKMEDGQVLVVQNTRYEDVKDGEYVKRESGNDPELGKYWASLGDLFINDAFGTAHRKHASNVGIASNMPGKAAAGFLMEKEIKFLGDAVTNPVRPFVAILGGAKVSDKIGVINNLLDKADKVIVGGGMTYTFYAAKGIKIGNSLVEEDKIDVAKEILEKAGDKLVLPVDNVVADKFANDANTKVVEGDIDDGWMALDIGPKSIEEFKKVLADAKTVVWNGPMGVFEMSNFAKGTLEVGQFLGTLEGATTIVGGGDSTAAAKQLGISDKLTHISTGGGASLAYLEGDVLPGIAAISDK

Annotated regions:
phrase: KVLMRVDFNV
type: CONSERVED_SITE
name: Phosphoglycerate_kinase_CS
description: Phosphoglycerate kinase, conserved site
Protein sequence:
MNQMLAAWQGTVTPEMEQVARDEGYPVEPVLQGVAAGTIVIPANMRRKNLKAVGIGTGLRTKVNANIGTSPKQSALDDHRVKLRVALDAGADAVMDLSTGGDLDRCRREILASCPVPVGTVPIYQAAIEAKERYGAIVAMREDELFEVVERQAKDGVDFFTIHAGVTLESLDRLRKQGRLTDIVSRGGSFLTGWMLHNDRENPFYKEFDRLLEICLAYDVALSLGDGMRPGCQADATDRAQVQELLILGELVDRCREAGVQVFVEGPGHVPLDQIIMNVQLQKRLCKGAPFYVLGPLVTDVAPGYDHITAAIGGAVAAMAGADFLCYVTPAEHLGLPTVEDVREGVIATRIAGHAADLVKRVPGAREWDERMSRARKALDWEKQIELAIDPEKARRYHTERNPEKFAGCTMCGEFCAMKLVGEYLGKDYENC

Annotated regions:
Protein sequence:
MAGNDCGALLDEELSSFFLNYLSDTQGGDSGEEQLCADLPELDLSQLDASDFDSATCFGELQWCPETSETEPSQYSPDDSELFQIDSENEALLAALTKTLDDIPEDDVGLAAFPELDEGDTPSCTPASPAPLSAPPSPTLERLLSPASDVDELSLLQKLLLATSSPTASSDALKDGATWSQTSLSSRSQRPCVKVDGTQDKKTPTLRAQSRPCTELHKHLTSVLPCPRVKACSPTPHPSPRLLSKEEEEEVGEDCPSPWPTPASPQDSLAQDTASPDSAQPPEEDVRAMVQLIRYMHTYCLPQRKLPQRAPEPIPQACSSLSRQVQPRSRHPPKAFWTEFSILRELLAQDILCDVSKPYRLAIPVYASLTPQSRPRPPKDSQASPAHSAMAEEVRITASPKSTGPRPSLRPLRLEVKRDVNKPTRQKREEDEEEEEEEEEEEEEKEEEEEEWGRKRPGRGLPWTKLGRKMDSSVCPVRRSRRLNPELGPWLTFTDEPLGALPSMCLDTETHNLEEDLGSLTDSSQGRQLPQGSQIPALESPCESGCGDTDEDPSCPQPTSRDSSRCLMLALSQSDSLGKKSFEESLTVELCGTAGLTPPTTPPYKPMEEDPFKPDTKLSPGQDTAPSLPSPEALPLTATPGASHKLPKRHPERSELLSHLQHATTQPVSQAGQKRPFSCSFGDHDYCQVLRPEAALQRKVLRSWEPIGVHLEDLAQQGAPLPTETKAPRREANQNCDPTHKDSMQLRDHEIRASLTKHFGLLETALEGEDLASCKSPEYDTVFEDSSSSSGESSFLLEEEEEEEEGGEEDDEGEDSGVSPPCSDHCPYQSPPSKASRQLCSRSRSSSGSSSCSSWSPATRKNFRRESRGPCSDGTPSVRHARKRREKAIGEGRVVYIRNLSSDMSSRELKKRFEVFGEIVECQVLTRSKRGQKHGFITFRCSEHAALSVRNGATLRKRNEPSFHLSYGGLRHFRWPRYTDYDPTSEESLPSSGKSKYEAMDFDSLLKEAQQSLH

Annotated regions:
phrase: VVYIRNLSSDMSSRELKKRFEVFGEIVECQVLTRSKRGQKHGFITFRCSEHAALSVRNGATLRKRNEPSF
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: RVVYIRNLSSDMSSRELKKRFEVFGEIVECQVLTRSKRGQKHGFITFRCSEHAALSVRNGATLRK
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: EKAIGEGRVVYIRNLSSDMSSRELKKRFEVFGEIVECQVLTRSKRGQKHGFITFRCSEHAALSVRNGATLRKRNEPSFHLSYGGLRHFRWPRYTDY
type: DOMAIN
name: PPARGC1B_RRM
description: PPARGC1B, RNA recognition motif

phrase: VYIRNLSSDMSSRELKKRFEVFGEIVECQVLTRSKRGQKHGFITFRCSEHAALSVRNGATLRK
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain
Protein sequence:
MALLNILQYPDERLHTVAKPVEQVDERIRKLVADMFETMYESRGIGLAATQVDVHERVVVMDLTEDRSEPRVFINPVIVEKDGETTYEEGCLSVPGIYDAVTRAERVKVEALNEKGEKFTLEADGLLAICVQHELDHLMGIVFVERLSQLKQGRIKTKLKKRQKHTI

Annotated regions:
Protein sequence:
MASNFKKTTMASSAQRKRMSPKPELTEDQKQEIREAFDLFDADGTGTIDIKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFSDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVNEQEFLRIMKKTSLY

Annotated regions:
phrase: EEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVNEQEFLRIM
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: QEIREAFDLFDADGTGTIDIKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFSDFLTVM
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: EILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVNEQEFLRIM
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: DQKQEIREAFDLFDADGTGTIDIKELKVAMRALGF
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: MIDEADRD
type: CONSERVED_SITE
name: RNA-helicase_DEAD-box_CS
description: ATP-dependent RNA helicase DEAD-box, conserved site

phrase: DADGTGTIDIKE
type: BINDING_SITE
name: EF_Hand_1_Ca_BS
description: EF-Hand 1, calcium-binding site

phrase: ELQEMIDEADRDGDGEVNEQEFLRIMKK
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: EIKKMISEIDKEGTGKMNFSDFLTVMTQ
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: EIREAFDLFDADGTGTIDIKELKVAMRA
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: EILKAFKLFDDDETGKISFKNLKRVAKE
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: LTDEELQEMIDEADRDGDGEVNEQEFLRIMKKTSL
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: DTKEEILKAFKLFDDDETGKISFKNLKRVAKELGE
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: PKKEEIKKMISEIDKEGTGKMNFSDFLTVMTQKMS
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: EIREAFDLFDADGTGTIDIKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFSDFLTVM
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: DRDGDGEVNEQE
type: BINDING_SITE
name: EF_Hand_1_Ca_BS
description: EF-Hand 1, calcium-binding site
Protein sequence:
MAATEPPSLREQPEMDDADNSEKSVNEENGEVSEDQSQNKHSRHKKKKHKHRSKHKKHKHSSEEDRDKKHKHKHKHKKHKRKEVLDASDKEGLSPAKRTKLDDLALLEDLEKQRALIKAELDNELMEGKVQSGMGLILQGYESGSEEEGEIHEKARNGNRSSTRSSSTRGKLEITDNKNSAKKRSKSRSKERTRHRSDKRKSKGAVEMMREKANRSKSKERRKSKSPSKRSKSQDQARKSKSPTLRRRSQEKVGKARSPADEKIKSEEKGKIKDRKKSPIVNERSRDRSKKSKSPVDLRDKSKDRRSRSKERKSKRSEIDKEKKPIKSPSKDASSGKENRSPSRRPGRSPKRRSLSPKQRDKSRRSRSPLLNDRRSKQSKSPSRTLSPGRRAKSRSLERKRREPERRRLSSPRTRPRDDILGRCERSKDASPINRWSPSRRRSRSPIRRRSRSPLRRSRSPRRRSRSPRRRDRSRRSRSRLRRRSRSRGGHRRRSRSKVKEDKFKGSLSEGMKVEQESSSDDNLEDFDVEEEDEEAVIEQRRIQRQAIVQKYKYLAEDSNISVPSEPSSPQSSTRSRSPSPDDILERVAADVKEYERENVDTFEASVKAKHNLMTVEQNNGSSQKKLLAPDMFTESDDMFAAYFDSARLRAAGIGKDFKENPNLRDNWTDAEGYYRVNIGEVLDKRYNVYGYTGQGVFSNVVRARDNARANQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCLVFEPLSMNLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNESKTILKLCDFGSASHVADNDITPYLVSRFYRAPEIIIGKSYDYGIDMWSVGCTLYELYTGKILFPGKTNNHMLKLAMDLKGKMPNKMIRKGVFKDQHFDQNLNFMYIEVDKVTEREKVTVMSTINPTKDLLADLIGCQRLPEDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAFIQEKI

Annotated regions:
phrase: RYNVYGYTGQGVFSNVVRARDNARANQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCLVFEPLSMNLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNESKTILKLCDFGSASHVADNDITPYLVSRFYRAPEIIIGKSYDYGIDMWSVGCTLYELYTGKILFPGKTNNHMLKLAMDLKGKMPNKMIRKGVFKDQHFDQNLNFMYIEVDKVTEREKVTVMSTINPTKDLLADLIGCQRLPEDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAF
type: DOMAIN
name: STKc_PRP4
description: Serine/threonine-protein PRP4, catalytic domain

phrase: ILHADIKPDNIL
type: ACTIVE_SITE
name: Ser/Thr_kinase_AS
description: Serine/threonine-protein kinase, active site

phrase: VYGYTGQGVFSNVVRARDNARANQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCLVFEPLSMNLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNESKTILKLCDFGSASHVADNDITPYLVSRFYRAPEIIIGKSYDYGIDMWSVGCTLYELYTGKILFPGKTNNHMLKLAMDLKGKMPNKMIRKGVFKDQHFDQNLNFMYIEVDKVTEREKVTVMSTINPTKDLLADLIGCQRLPEDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: YNVYGYTGQGVFSNVVRARDNARANQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCLVFEPLSMNLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNESKTILKLCDFGSASHVADNDITPYLVSRFYRAPEIIIGKSYDYGIDMWSVGCTLYELYTGKILFPGKTNNHMLKLAMDLKGKMPNKMIRKGVFKDQHFDQNLNFMYIEVDKVTEREKVTVMSTINPTKDLLADLIGCQRLPEDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: YNVYGYTGQGVFSNVVRARDNARANQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCLVFEPLSMNLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNESKTILKLCDFGSASHVADNDITPYLVSRFYRAPEIIIGKSYDYGIDMWSVGCTLYELYTGKILFPGKTNNHMLKLAMDLKGKMPNKMIRKGVFKDQHFDQNLNFMYIEVDKVTEREKVTVMSTINPTKDLLADLIGCQRLPEDQRKKVHQLKDLLDQILMLDPAKRISINQALQHAF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain
Protein sequence:
MKFLLAFSLLIPSVVFASSSKFQQVEQDVKAIEVSLSARIGVSVLDTQNGEYWDYNGNQRFPLTSTFKTIACAKLLYDAEQGKVNPNSTVEIKKADLVTYSPVIEKQVGQAITLDDACFATMTTSDNTAANIILSAVGGPKGVTDFLRQIGDKETRLDRIEPDLNEGKLGDLRDTTTPKAIASTLNKFLFGSALSEMNQKKLESWMVNNQVTGNLLRSVLPAGWNIADRSGAGGFGARSITAVVWSEHQAPIIVSIYLAQTQASMAERNDAIVKIGHSIFDVYTSQSR

Annotated regions:
phrase: GVSVLDTQNGEYWDYNGNQRFPLTSTFKTIACAKLLYDAEQGKVNPNSTVEIKKADLVTYSPVIEKQVGQAITLDDACFATMTTSDNTAANIILSAVGGPKGVTDFLRQIGDKETRLDRIEPDLNEGKLGDLRDTTTPKAIASTLNKFLFGSALSEMNQKKLESWMVNNQVTGNLLRSVLPAGWNIADRSGAGGFGARSITAVVWSEHQAPIIVSI
type: DOMAIN
name: Beta-lactam_cat
description: Beta-lactamase class A, catalytic domain

phrase: FPLTSTFKTIACAKL
type: ACTIVE_SITE
name: Beta-lactam_class-A_AS
description: Beta-lactamase, class-A active site
Protein sequence:
MPVVTRLIRLKCVGLRLDRSGLNRRICHGGHGESTRRRVMEELSSLTVSQREQFLVENDVFGIYNYFDASDVSTQKYMMEIQRDKQLDYLMKGLRQLGPQFSSLDANRPWLCYWILHSIALLGETVDDELESNAIDFLGRCQGSEGGYGGGPGQLPHLATTYAAVNALVTLGGDKALSSINREKMSCFLRRMKDTSGGFRMHDMGEMDVRACYTAISVASILNIMDDELTQGLGDYILSCQTYEGGIGGEPGSEAHGGYTYCGLAAMILINEVDRLNLDSLMNWAVHRQGVEMGFQGRTNKLVDGCYTFWQAAPCVLLQRLYSTNDHDVHGSSHISEGTNEEHHAHDEDDLEDSDDDDDSDEDNDEDSVNGHRIHHTSTYINRRMQLVFDSLGLQRYVLLCSKIPDGGFRDKPRKPRDFYHTCYCLSGLSVAQHAWLKDEDTPPLTRDIMGGYSNLLEPVQLLHNIVMDQYNEAIEFFFKAA

Annotated regions:
phrase: QRDKQLDYLMKGLRQLGPQFSSLDANRPWLCYWILHSIALLGETVDDELESNAIDFLGRCQGSEGGYGGGPGQLPHLATTYAAVNALVTLGGDKALSSINREKMSCFLRRMKDTSGGFRMHDMGEMDVRACYTAISVASILNIMDDELTQGLGDYILSCQTYEGGIGGEPGSEAHGGYTYCGLAAMILINEVDRLNLDSLMNWAVHRQGVEMGFQGRTNKLVDGCYTFWQAAPCVLLQRLYSTNDHDVHGSSHISEGTNEEHHAHDEDDLEDSDDDDDSDEDNDEDSVNGHRIHHTSTYINRRMQLVFDSLGLQRYVLLCSKIPDGGFRDKPRKPRDFYHTCYCLSGLSVAQHAWLKDEDTPPLTRDIMGGYSNLLEPVQL
type: DOMAIN
name: Prenyltrans
description: Prenyltransferase alpha-alpha toroid domain
Protein sequence:
MSSSESIRMVLIGPPGAGKGTQAPNLQERFHAAHLATGDMLRSQIAKGTQLGLEAKKIMDQGGLVSDDIMVNMIKDELTNNPACKNGFILDGFPRTIPQAEKLDQMLKEQGTPLEKAIELKVDDELLVARITGRLIHPASGRSYHKIFNPPKEDMKDDVTGEALVQRSDDNADALKKRLAAYHAQTEPIVDFYKKTGIWAGVDASQPPATVWADILNKLGKD

Annotated regions:
phrase: FILDGFPRTIP
type: CONSERVED_SITE
name: Adenylat_kinase_CS
description: Adenylate kinase, conserved site

phrase: RLIHPASGRSYHKIFNPPKEDMKDDVTGEALVQRS
type: DOMAIN
name: Adenylate_kinase_lid-dom
description: Adenylate kinase, active site lid domain
Protein sequence:
MISTKRHINTNELLHLSKAVVFGSGAFGTALAMVLSKKCREVCVWHIKEEEARLVNEKRENDLYLRGVQLASNIIFTSDVDEAYKGAELILFVIPTQFLRGFFQKSGGNLIAYAKARQVPVLVCTKGIERSTLKFPAQIVGEFFPSNLLSVLAGPSFAIEVATGVFTCVSVASADINVARRLQRIMTTGDRSFVCWATTDTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALITRGLLEIRDLTAALGGDGSAIFGLAGFGDLQLTCSSELSRNFTVGKKLGKGLSLEEIQRTSKAVAEGVATAEPLVRLAQQLKVTMPLCQQIYEVVYKKKNPRAAIADLLSCGLQDEGLPPLFKKSAATPSKL

Annotated regions:
phrase: DTVGCEVASAVKNVLAIGSGVANGLGMGLNARAALITRGLLEIRDLTAALGGDGSAIFGLAGFGDLQLTCSSELSRNFTVGKKLGKGLSLEEIQRTSKAVAEGVATAEPLVRLAQQLKVTMPLCQQIYEVVYKKKNPRAA
type: DOMAIN
name: G3P_DH_NAD-dep_C
description: Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal

phrase: VVFGSGAFGTALAMVLSKKCREVCVWHIKEEEARLVNEKRENDLYLRGVQLASNIIFTSDVDEAYKGAELILFVIPTQFLRGFFQKSGGNLIAYAKARQVPVLVCTKGIERSTLKFPAQIVGEFFPSNLLSVLAGPSFAIEVATGVFTCVSVASADIN
type: DOMAIN
name: G3P_DH_NAD-dep_N
description: Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal
Protein sequence:
MRPSGRKLDQMRSVSIEPNVMKHAEGSCLIRMGETHVLCSASIEDKPPPFLKNTGLGWVTAEYGMLPRATTSRNRREAAAGKQSGRTQEIQRLIGRALRAGVDRSALGERQIVIDCDVLQADGGTRCASITGGWVALRLAVNKLLKAGIIVSDPIVDHVAAVSCGIYAGQPVLDLDYAEDSTAGTDGNFVLTGRSRMIEVQMSAEGASFSRDEMGQLLDLAEAGIAELVAAQKAALG

Annotated regions:
phrase: CDVLQADGGTRC
type: CONSERVED_SITE
name: RNase_PH_CS
description: Ribonuclease PH, conserved site

phrase: VAAVSCGIYAGQPVLDLDYAEDSTAGTDGNFVLTGRSRMIEVQMSAEGASFSRDEMGQLLDLAE
type: DOMAIN
name: ExoRNase_PH_dom2
description: Exoribonuclease, phosphorolytic domain 2

phrase: QMRSVSIEPNVMKHAEGSCLIRMGETHVLCSASIEDKPPPFLKNTGLGWVTAEYGMLPRATTSRNRREAAAGKQSGRTQEIQRLIGRALRAGVDRSALGERQIVIDCDVLQADGGTRCASITGGWVALRL
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1
Protein sequence:
MPDRGGENGASCSVGRWSAEEARAIYNLPFNDLLFRAHGLHRENFDPNRIQLSKLLNIKTGGCPEDCGYCSQSASAENGLKASKLMEIETVLEEARKAKAAGATRYCMGAAWRSPKDRDMPALTHMIESVKAMGLETCMTLGMLDSDKAEKLADAGLDYYNHNIDTSERFYPAVITTRSFEDRLDTLANVRNAGIKVCSGGILGLGEEAEDRIDMLVTLANLPEPPESVPINMLIPMPGTRLAKAAPVDPLEFVRVVALARILMPKSHVRLTAGRTAMSDEMQALCFFAGANSLFMGDTLLTAANPGDDRDSSLLRRLGIQAETEQPA

Annotated regions:
phrase: GRWSAEEARAIYNLPFNDLLFRAHGLHRENFDPNRIQLSKLLNIKTGGCPEDCGYCSQSASAENGLKASKLMEIETVLEEARKAKAAGATRYCMGAAWRSPKDRDMPALTHMIESVKAMGLETCMTLGMLDSDKAEKLADAGLDYYNHNIDTSERFYPAVITTRSFEDRLDTLANVRNAGIKVCSGGILGLGEEAEDRIDMLVTLANLPEPPESVPINMLIPMPGTRLAKAAPVDPLEFVRVVALARILMPKSHVRLTAGRTAMSDEMQALCFFAGANSLFMGDTLLTAANPGDDRDSSLLRRLGIQAETE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: NRIQLSKLLNIKTGGCPEDCGYCSQSASAENGLKASKLMEIETVLEEARKAKAAGATRYCMGAAWRSPKDRDMPALTHMIESVKAMGLETCMTLGMLDSDKAEKLADAGLDYYNHNIDTSERFYPAVITTRSFEDRLDTLANVRNAGIKVCSGGILGLGEEAEDRIDMLVTLANLPEPPESVPINMLIPMPGTRLAKAAPVDPLEFVRVVALARILMPKSHVRLTAG
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: IKTGGCPEDCGYCSQSASAENGLKASKLMEIETVLEEARKAKAAGATRYCMGAAWRSPKDRDMPALTHMIESVKAMGLETCMTLGMLDSDKAEKLADAGLDYYNHNIDTSERFYPAVITTRSFEDRLDTLANVRNAGIKVCSGGILGLGEEAEDRIDM
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SKLLNIKTGGCPEDCGYCSQSASAENGLKASKLMEIETVLEEARKAKAAGATRYCMGAAWRSPKDRDMPALTHMIESVKAMGLETCMTLGMLDSDKAEKLADAGLDYYNHNIDTSERFYPAVITTRSFEDRLDTLANVRNAGIKVCSGGILGLGEEAEDRIDMLVTLANLPEPPESVPINMLIPMPGTRLAKAAPVDPLEFVRVVALARILM
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: PINMLIPMPGTRLAKAAPVDPLEFVRVVALARILMPKSHVRLTAGRTAMSDEMQALCFFAGANSLFMGDTLLTAANPGDDRDSSLLRRLGIQ
type: DOMAIN
name: BATS_dom
description: Biotin and thiamin synthesis-associated domain

phrase: PINMLIPMPGTRLAKAAPVDPLEFVRVVALARILMPKSHVRLTAGRTAMSDEMQALCFFAGANSLFMGDTLLTAANPGDDRDSSLLRRLGI
type: DOMAIN
name: BATS_dom
description: Biotin and thiamin synthesis-associated domain
Protein sequence:
MKIIKPTPIKRVGKHDRERRVLLGLVDYYIQTGKPVGSNTLKEAGFEDLSSATIRNYFAQLEEEGYLLQSHSSGGRIPTDLAYRIYAHAYLNTNEPYPKQNPFEAFKSFESKEIAIFLQEAAEKLSWETNCAVFLSAPRFDHDFIANLKLVPLDAYRCLCIIMTDFGVIKTEVMHLPVKLSSFGIKRIENYFHCRLTNLGEPENLEPEEETVAQTFYNELMLRYIVGYSNFIDVDLYRTGFSRLLFYSDFQDTNLLASSLSLFENAHSMRLLLKECKALNHLRFWIGDDLSSFANSSPRCSVLTIPYYINYKPVGAVGLLGPTRLPYRALFSLLKLFSDCISETVTKNVYKFKIDYRQPEQSLYLKKEESLLIGQSRFLIEDKRP

Annotated regions:
phrase: LQEAAEKLSWETNCAVFLSAPRFDHDFIANLKLVPLDAYRCLCIIMTDFGVIKTEVMHLPVKLSSFGIKRIENYFHCRLTNLGEPENLEPEEETVAQTFYNELMLRYIVGYSNFIDVDLYRTGFSRLLFYSDFQDTNLLASSLSLFENAHSMRLLLKECKALNHLRFWIGDDLSSFANSSPRCSVLTIPYYINYKPVGAVGLLGPTRLPY
type: DOMAIN
name: HrcA_C
description: Heat-inducible transcription repressor HrcA, C-terminal
Protein sequence:
MLRTSIASSRPLLPSSVCPKAPAQWLCTSRARRVNTATRRYHALARKSNAGRRCSLTPNTATTSQFFQKAASSTSTKPPGPSDADVRSPASPSSRSSLRPESIPKPPQSPPVQGQTSPGSEVLPPDHESSTPPPPPGPKSSRLRKLLYLFLTAGLAYAGGVWYSLRSDNFYDFFTEYIPYGEEAVLYLEERDFRNRFPHVTKQINRRVTVPKDEGAQVTIPSGSGLSWKVAEEQQEATDMTKKGRRMGTAHANEPTKDIKVAEKAKEEVKSKSAAKKEDVAANIPIQEALEPQPAKTEEKNLEAPRQPAVPAVTAIERLVQDKADEPVVQDLVKVFNDVISVISADESASKFAGPIAKAKEELQRIGDRIVALKKDAQESAQEEIRNAHAAFDKSAAELIRRIDEVRTQDAAEFREEFESEREKIARSYQEKVNTELQRAHEVAEQRLRNELVEQAIELNRKFLSDVKTLVENEREGRLSKLAELSANVAELERLTAGWSDVVDINLKTQQLQVAVDAVRTTLENSDVPRPFVRELAAVKELASNDEVVAAAIASISPAAYQRGIPSAAQLVDRFRRVASEVRKARLLPENAGITSHAASLVLSKVMLKKQGLPTSDDVESILTRTENFLEEGNFDEAAREMNSLQGWAKLLSKDWLADVRRVLEVKQALEIIETEARLRCLQVE

Annotated regions:
Protein sequence:
MRVLGIESSCDETGVALVEVRGSVLPVLLADALYSQIEMHQAYGGVVPELASRDHIRRVLPLTEQVLAASGRTLADIDVVAFTRGPGLAGALLVGAGVACALGAALGKPVLGVHHLEGHLLSPFLSADPPEFPFVALLVSGGHTQLMRVDGVGRYELLGETIDDAAGEAFDKSAKLLGLAYPGGPALSRLAEQGDATAFKLPRPLLKSGNLDFSFAGLKTAVMVQAKKLAAAQDGSVEALPVQVLADLAASTQAAIVEVLVKKSMTALSQTSLKRLVVAGGVGANRSLRAQLNAECGKRGVRVHYPELHLCTDNGAMIAMAAAMRLQSGQQAASEVYAFDVRPRWPLGDLTASA

Annotated regions:
phrase: LLADALYSQIEMHQAYGGVVPELASRDHIRRVLPLTEQVLAASGRTLADIDVVAFTRGPGLAGALLVGAGVACALGAALGKPVLGVHHLEGHLLSPFLSADPPEFPFVALLVSGGHTQLMRVDGVGRYELLGETIDDAAGEAFDKSAKLLGLAYPGGPALSRLAEQGDATAFKLPRPLLKSGNLDFSFAGLKTAVMVQAKKLAAAQDGSVEALPVQVLADLAASTQAAIVEVLVKKSMTALSQTSLKRLVVAGGVGANRSLRAQLNAECGKRGVRVHYPELHLCTDNGAMI
type: DOMAIN
name: Gcp-like_dom
description: Gcp-like domain

phrase: CALGAALGKPVLGVHHLEGH
type: CONSERVED_SITE
name: Peptidase_M22_CS
description: Peptidase M22, conserved site

phrase: MRVLGIESSCDETGVALVEVRGSVLPVLLADALYSQIEMHQAYGGVVPELASRDHIRRVLPLTEQVLAASGRTLADIDVVAFTRGPGLAGALLVGAGVACALGAALGKPVLGVHHLEGHLLSPFLSADPPEFPFVALLVSGGHTQLMRVDGVGRYELLGETIDDAAGEAFDKSAKLLGLAYPGGPALSRLAEQGDATAFKLPRPLLKSGNLDFSFAGLKTAVMVQAKKLAAAQDGSVEALPVQVLADLAASTQAAIVEVLVKKSMTALSQTSLKRLVVAGGVGANRSLRAQLNAECGKRGVRVHYPELHLCTDNGAMIAMAAAMRLQSGQQAASEVYAFDVRPRWPLGD
type: DOMAIN
name: Gcp-like_dom
description: Gcp-like domain
Protein sequence:
MEKVFSDEEISGNHHWSVNGMTSLNRSASEWAFNRFIQESSAAADDGESTTACGVSVSSPPNVPVDSEEYRAFLKSKLNLACAAVAMKRGTFIKPQDTSGRSDNGGANESEQASLASSKATPMMSSAITSGSELSGDEEEADGETNMNPTNVKRVKRMLSNRESARRSRRRKQAHLSELETQVSQLRVENSKLMKGLTDVTQTFNDASVENRVLKANIETLRAKVKMAEETVKRLTGFNPMFHNMPQIVSTVSLPSETSNSPDTTSSQVTTPEIISSGNKGKALIGCKMNRTASMRRVESLEHLQKRIRSVGDQ

Annotated regions:
phrase: NVKRVKRMLSNRESARRSRRRKQAHLSELETQVSQLRVENSKLMKGLTDVTQTFNDASVENRV
type: DOMAIN
name: bZIP
description: Basic-leucine zipper domain

phrase: VKRVKRMLSNRESARRSRRRKQAHLSELETQVSQLRVENSKLMKGLT
type: DOMAIN
name: bZIP
description: Basic-leucine zipper domain

phrase: KRMLSNRESARRSRR
type: DOMAIN
name: bZIP
description: Basic-leucine zipper domain

phrase: PTNVKRVKRMLSNRESARRSRRRKQAHLSELETQVSQLRVENSKLMKGLTDVTQTFNDASVENR
type: DOMAIN
name: bZIP
description: Basic-leucine zipper domain

phrase: LIGCKMNRTASMRRVESLEHLQKRIR
type: DOMAIN
name: Basic_leucine-zipper_C
description: Basic leucine-zipper, C-terminal

phrase: TLRAKVKMAEETVKRLTGFNPMFHNMPQIVSTVSLPSETSNSPDTTSSQ
type: DOMAIN
name: Basic_leucine-zipper_C
description: Basic leucine-zipper, C-terminal
Protein sequence:
MKSKRRKARELAIQVLYSWQISKKIVLFETEKYVIEQNKKYSLDKIYFHKIVTGVIKNIFYIDKIIKKNISKKKNRLDYIEQAILRLASYEIIKRLDIPYKVIINEGIELAKIYGSNKSHKFINSILDKIITNKNNIKIKNF

Annotated regions:
phrase: RKARELAIQVLYSWQISKKIVLFETEKYVIEQNKKYSLDKIYFHKIVTGVIKNIFYIDKIIKKNISKKKNRLDYIEQAILRLASYEIIKRLDIPYKVIINEGIELAKIYGSNKSHKFINSILDKI
type: DOMAIN
name: NusB_RsmB_TIM44
description: NusB/RsmB/TIM44
Protein sequence:
MSRSSKKGAFVEASLYKKVLDMNAQQKKKIIKTWSRRSTIFPDFVGHTFAVHNGKKFINVYVTEDMIGHKLGEFSPTRTFKGHSSNR

Annotated regions:
phrase: NGKKFINVYVTEDMIGHKLGEFSP
type: CONSERVED_SITE
name: Ribosomal_uS19_CS
description: Small ribosomal subunit protein uS19, conserved site
Protein sequence:
MIQKNWQELIKPNKVEFTSSGRTKATLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAVQIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDAKRMVVRKQGPGVVTAGDIQTVGDIEILNPEHVICTLDEGAEIRMEFTVNNGKGYVPAERNRAEDAPIGLIPVDSLYSPVKKVSYKVENTREGQVLDYDKLSMSIETDGSITGEDAVAFAARILQDQLGVFVNFDEPQKEAEEEAVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLNEIKEVLASMGLHLGMEVPAWPPENIEDLAKRYEDQY

Annotated regions:
phrase: PALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLNEIKEVL
type: DOMAIN
name: RNAP_asu_C
description: RNA polymerase, alpha subunit, C-terminal

phrase: KATLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAVQIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDAKRMVVRKQGPGVVTAGDIQTVGDIEILNPEHVICTLDEGAEIRMEFTVNNGKGYVPAERNRAEDAPIGLIPVDSLYSPVKKVSYKVENTREGQVLDYDKLSMSIETDGSITGEDAVAFAARILQDQLGVFVN
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: VQIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDAKRMVVRKQGPGVVTAGDIQTVGDIEILNPEHVICTLDEGAEIRMEFTVNNGKGYVPAERNRAEDAPIGLIPVDSLY
type: DOMAIN
name: DNA-dir_RNA_pol_insert
description: DNA-directed RNA polymerase, insert domain

phrase: EPLERGFGLTLGNALRRVLLSSLRGAAVTAVQIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDAKRMVVRKQGPGVVTAGDIQTVGDIEILNPEHVICTLDEGAEIRMEFTVNNGKGYVPAERNRAEDAPIGLIPVDSLYSPVKKVSYKVENTREGQVLDYDKLSMSIETDGSITGEDAVAFAARILQDQ
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type
Protein sequence:
MTLLDPLANALSHITNSERVGKKEVYIKPASKLIGEVLRVMQENGYIGEFEFIDDGRAGIYRVQLIGKINKAGAIKPRFPVKAREYEAWEKRFLPAFEFGILIVSTSQGVMTHKEAIEKGIGGRLIAYVY

Annotated regions:
phrase: GILIVSTSQGVMTHKEA
type: CONSERVED_SITE
name: Ribosomal_uS8_CS
description: Small ribosomal subunit protein uS8, conserved site
Protein sequence:
MPDPDSTLAARLLRIRGRVQGVSYRASAQREAQRLGLSGWVRNRHDGSVEALVCGPADTVERFIAWAHVGPPAASVSAIEVGDAAPTDGAGFDCLPTC

Annotated regions:
phrase: LRIRGRVQGVSYRASAQREAQRLGLSGWVRNRHDGSVEALVCGPADTVERFIAWAHVGPPAASVSAIEVGDAAPTDGAG
type: DOMAIN
name: Acylphosphatase-like_dom
description: Acylphosphatase-like domain

phrase: GWVRNRHDGSVEALVC
type: CONSERVED_SITE
name: Acylphosphatase_CS
description: Acylphosphatase, conserved site

phrase: ARLLRIRGRVQGVSYRASAQREAQRLGLSGWVRNRHDGSVEALVCGPADTVERFIAWAHVGPPAASVSAIEVGDAAPTDGAGFDCL
type: DOMAIN
name: Acylphosphatase-like_dom
description: Acylphosphatase-like domain
Protein sequence:
MATLFIADLHLCVEEPAITAGFLRFLAGEARKADALYILGDLFEAWIGDDDPNPLHRQMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKVLELYGRRVLIMHGDTLCTDDAGYQAFRTKVHKPWLQTLFLALPLFVRKRIAVRMRANSKEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGAWHTEGSMVKVTADDVELIHFPF

Annotated regions:
phrase: ATLFIADLHLCVEEPAITAGFLRFLAGEARKADALYILGDLFEAWIGDDDPNPLHRQMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKVLELYGRRVLIMHGDTLCTDDAGYQAFRTKVHKPWLQTLFLALPLFVRKRIAVRMRANSKEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHR
type: DOMAIN
name: Calcineurin-like_PHP_ApaH
description: Calcineurin-like phosphoesterase domain, ApaH type
Protein sequence:
MSKLFWAMLSFITRLPVPRRWSQGLDFEHYSRGIITFPLIGLLLGAISGLVFMVLQAWCGVPLAALFSVLVLALMTGGFHLDGLADTCDGVFSARSRDCMLEIMRDSRLGTHGGLALIFVVLAKILVLSELALRGEPSLASLAAACAVSRGTAALLMYRHRYAREEGLGNVFIGKIDGRQTCVTLGLAAIFAAVLLPGMHGVAAMVVTMVAIFILGQLLKRTLGGQTGDTLGAAIELGELVFLLALL

Annotated regions:
Protein sequence:
MKILCIFLTFVFTVSCGPSVPQKKTREVAERKRECQLVRGACKPECNSWEYVYYYCNVNPCCAVWEYQKPIINKITSKLHQK

Annotated regions:
phrase: ECQLVRGACKPECNSWEYVYYYCNVNPC
type: DOMAIN
name: Beta_defensin_dom
description: Beta-defensin domain
Protein sequence:
MALEKLGKALNNALRKLARSSTVDEATIKEVVRDIQRALIQADVNVRLVLDLTKRIEKRALEEEPPTGVSKKEHIIKIVYEELTKFLGTEAKPIEIKEKPTVLLTVGIQGSGKTTSIAKLARYFQKRGYKVGLVCSDTWRPGAYQQLKQLVEPFGIEVFGDPEEKDAIKLAKEGVEHFREKGVDIIIVDSAGRHKEEKSLIEEMKQISAAIKPHEVILVIDGTIGQQAYNQALAFKEATPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGVGERIDDLEPFDPKRFVSRLLGLGDIQGLLEKFEELQKQQEFREEDLEKFLKGKFNLKDMYAQLEAMQKMGPLKQILQMIPGMGYSLPDDAVRVGEERLKKFKVIMDSMTEEELEHPEIINYSRIKRIARGSGTSIQEVRELLHQYNQMKKMFKSMDKRKLSKMARKFNLGGFGL

Annotated regions:
phrase: ALEKLGKALNNALRKLARSSTVDEATIKEVVRDIQRALIQADVNVRLVLDLTKRIEKRALEEEPPTGVSKKEHIIKIVYEELTKF
type: DOMAIN
name: Signal_recog_particl_SRP54_hlx
description: Signal recognition particle SRP54, helical bundle

phrase: PTVLLTVGIQGSGKTTSIAKLARYFQKRGYKVGLVCSDTWRPGAYQQLKQLVEPFGIEVFGDPEEKDAIKLAKEGVEHFREKGVDIIIVDSAGRHKEEKSLIEEMKQISAAIKPHEVILVIDGTIGQQAYNQALAFKEATPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGVGERIDDLEPFDPKRFVSRLL
type: DOMAIN
name: SRP54_GTPase_dom
description: Signal recognition particle, SRP54 subunit, GTPase domain

phrase: LGKALNNALRKLARSSTVDEATIKEVVRDIQRALIQADVNVRLVLDLTKRIEKRALEEEPPTGVSKKEHIIKIVYEE
type: DOMAIN
name: Signal_recog_particl_SRP54_hlx
description: Signal recognition particle SRP54, helical bundle

phrase: KFNLKDMYAQLEAMQKMGPLKQILQMIPGMGYSLPDDAVRVGEERLKKFKVIMDSMTEEELEHPEIINYSRIKRIARGSGTSIQEVRELLHQYNQMKKM
type: DOMAIN
name: Signal_recog_particle_SRP54_M
description: Signal recognition particle, SRP54 subunit, M-domain

phrase: KPTVLLTVGIQGSGKTTSIAKLARYFQKRGYKVGLVCSDTWRPGAYQQLKQLVEPFGIEVFGDPEEKDAIKLAKEGVEHFREKGVDIIIVDSAGRHKEEKSLIEEMKQISAAIKPHEVILVIDGTIGQQAYNQALAFKEATPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFI
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: PTVLLTVGIQGSGKTTSIAKLARYFQKRGYKVGLVCSDTWRPGAYQQLKQLVEPFGIEVFGDPEEKDAIKLAKEGVEHFREKGVDIIIVDSAGRHKEEKSLIEEMKQISAAIKPHEVILVIDGTIGQQAYNQALAFKEATPIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGVGERIDDLEPFDPKRFVSRLL
type: DOMAIN
name: SRP54_GTPase_dom
description: Signal recognition particle, SRP54 subunit, GTPase domain

phrase: PIKFIGVGERIDD
type: DOMAIN
name: SRP54_GTPase_dom
description: Signal recognition particle, SRP54 subunit, GTPase domain
Protein sequence:
MLKNLRETMRTAPIVRRGTYNYFIHPISDGVPVVKPELLREVIACMVKNADLDVDKIVTIEAMGLPLGAALSTMTDIPFIIIRKRKYELPGEIAVHQTTGYSRGELYLNGINKGDRVLIIDDVISTGGTMKAVIKALEKAGAVIKDIVVVIERGDGKKSIEELGYDVQTLIKIDVDENGVKILGCIDEECQ

Annotated regions:
phrase: VIACMVKNADLDVDKIVTIEAMGLPLGAALSTMTDIPFIIIRKRKYELPGEIAVHQTTGYSRGELYLNGINKGDRVLIIDDVISTGGTMKAVIKALEKAGAVIKDIVVVIERGDGKKSIEELGYDVQTLIKIDVDE
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: EVIACMVKNADLDVDKIVTIEAMGLPLGAALSTMTDIPFIIIRKRKYELPGEIAVHQTTGYSRGELYLNGINKGDRVLIIDDVISTGGTMKAVIKALEKAGAVIKDIVVVIERGDGKKSIEELGY
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain