nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MATIKVDVVSAEEQIFSGEAKFVALPGETGELGILPGHTPLITRIRPGAVRIEVEGGSDEFVFVAGGILEVQPGAVTVLADTAIRGKDLDAAKAEEARKRAEETLQNAKSDLDLAKAQSELATAMAQLEAIQRLAKIRSRH

Annotated regions:
phrase: IKVDVVSAEEQIFSGEAKFVALPGETGELGILPGHTPLITRIRPGAVRIEVEGGSDEFVFVAGGILEVQPGAVTVLADT
type: DOMAIN
name: ATP_synth_F1_dsu/esu_N
description: ATP synthase, F1 complex, delta/epsilon subunit, N-terminal

phrase: KDLDAAKAEEARKRAEETLQNAKSDLDLAKAQSELATAMAQLEAI
type: DOMAIN
name: ATP_synth_F1_esu_C
description: ATP synthase epsilon subunit, C-terminal domain
Protein sequence:
MPKLKTRKAAAKRFRPTGSGKKIIRRKAFKNHLLEHKSSEQKHRRLSNLALVHEADEKNVRLMLPYM

Annotated regions:
phrase: KTRKAAAKRFRPTGSGKKIIRRKAFKN
type: CONSERVED_SITE
name: Ribosomal_bL35_CS
description: Large ribosomal subunit protein bL35, conserved site
Protein sequence:
MATEGGGKEMNEIKTQFTTREGLYKLLPHSEYSRPNRVPFNSQGSNPVRVSFVNLNDQSGNGDRLCFNVGRELYFYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLVGFSAGQVQLIDPIKKETSKLFNEERLIDKSRVTCVKWVPGSESLFLVAHSSGNMYLYNVEHTCGTTAPHYQLLKQGESFAVHTCKSKSTRNPLLKWTVGEGALNEFAFSPDGKFLACVSQDGFLRVFNFDSVELHGTMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFVDCRVIARGHGHKSWVSVVAFDPYTTSVEEGDPMEFSGSDEDFQDLLHFGRDRANSTQSRLSKRNSTDSRPVSVTYRFGSVGQDTQLCLWDLTEDILFPHQPLSRARTHTNVMNATSPPAGSNGNSVTTPGNSVPPPLPRSNSLPHSAVSNAGSKSSVMDGAIASGVSKFATLSLHDRKERHHEKDHKRNHSMGHISSKSSDKLNLVTKTKTDPAKTLGTPLCPRMEDVPLLEPLICKKIAHERLTVLIFLEDCIVTACQEGFICTWGRPGKVVSFNP

Annotated regions:
phrase: DCRVIARGHGHKSWVSVVAFDPYTTSVEEGDPMEFSGSDEDFQDLLHFGRDRANSTQSRLSKRNSTDSRPVSVTYRFGSVGQDTQLCLW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: TRNPLLKWTVGEGALNEFAFSPDGKFLACVSQDGFLRVF
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LFNEERLIDKSRVTCVKWVPGSESLFLVAHSSGNMYLY
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: SVELHGTMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: GGLLCVCWSPDGKYIVTGGEDDLVTVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LNEFAFSPDGKFLACVSQDGFLRVF
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: MKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat
Protein sequence:
MKRKTIDIITLGCSKNLVDSEQLMRQLEEAGYDVTHDSEKPTGEIAVINTCGFIGDAKEESINMILEFAQEKEEGNLEKLFVMGCLSERYLKELAIEIPQVDKFYGKFNWKGLLQDLGKAYHEELHIERTLTTPKHYAYLKISEGCDRKCSYCAIPIITGRHVSRPIEEILDEVRYLVSNGVKEFQVIAQELTYYGVDLYKKQMLPELIERISEIPGVEWIRLHYAYPAHFPEELFRVMRERDNVCKYMDIALQHISDNMLQRMRRHVTKKETYRLIEQFRKEVPGIHLRTTLMVGHPGETEGDFEELKEFVRKVRFDRMGAFTYSEEEGTYAAANYEDSIPQELKQARLDELMAIQQGISTELSASKVGQKMKVIIDRIEGEYYIGRTEFDSPEVDPEVLIRCEGDNLMIGNFYQVQVIDSDEFDLFGEII

Annotated regions:
phrase: VGQKMKVIIDRIEGEYYIGRTEFDSPEVDPEVLIRCEGDNLMIGNFYQVQVIDSDEFDLFGEI
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: ASKVGQKMKVIIDRIEGEYYIGRTEFDSPEVDPEVLIRCEGDNLMIGNFYQVQVIDSDEFDLFGEI
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: TTPKHYAYLKISEGCDRKCSYCAIPIITGRHVSRPIEEILDEVRYLVSNGVKEFQVIAQELTYYGVDLYKKQMLPELIERISEIPGVEWIRLHYAYPAHFPEELFRVMRERDNVCKYMDIALQHISDNMLQRMRRHVTKKETYRLIEQFRKEVPGIHLRTTLMVGHPGETEGDFEELKEFVRKVRFDRMGAFTYSEEEGTYAAANYEDSIPQELKQARLDELMAIQQGIST
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: IDIITLGCSKNLVDSEQLMRQLEEAGYDVTHDSEKPTGEIAVINTCGFIGDAKEESINMILEFAQEKEEGNLEKLFVMGCLSERYLKELAIEIPQVDKFY
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: LKISEGCDRKCSYCAIPIIT
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: KISEGCDRKCSYCAIPIITGRHVSRPIEEILDEVRYLVSNGVKEFQVIAQELTYYGVDLYKKQMLPELIERISEIPGVEWIRLHYAYPAHFPEELFRVMRERDNVCKYMDIALQHISDNMLQRMRRHVTKKETYRLIEQFRKEVPGIHLRTTLMVGHPGETEGDFEELKEF
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: HYAYLKISEGCDRKCSYCAIPIITGRHVSRPIEEILDEVRYLVSNGVKEFQVIAQELTYYGVDLYKKQMLPELIERISEIPGVEWIRLHYAYPAHFPEELFRVMRERDNVCKYMDIALQHISDNMLQRMRRHVTKKETYRLIEQFRKEVPGIHLRTTLMVGHPGETEGDFEELKEFVRKVRFDRMGAFTYSEEEGTYAAANYEDSIPQELKQARLDELM
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: KRKTIDIITLGCSKNLVDSEQLMRQLEEAGYDVTHDSEKPTGEIAVINTCGFIGDAKEESINMILEFAQEKEEGNLEKLFVMGCLSERYLKELAIEIPQVDKFYGKFNWKGLLQDLGKAYHEELHIERTLTTPKHYAYLKISEGCDRKCSYCAIPIITGRHVSRPIEEILDEVRYLVSNGVKEFQVIAQELTYYGVDLYKKQMLPELIERISEIPGVEWIRLHYAYPAHFPEELFRVMRERDNVCKYMDIALQHISDNMLQRMRRHVTKKETYRLIEQFRKEVPGIHLRTTLMVGHPGETEGDFEELKEFVRKVRFDRMGAFTYSEEEGTYAAANYEDSIPQELKQARLDELMAIQQGISTELSASKVGQKMKVIIDRIEGEYYIGRTEFDSPEVDPEVLIRCEGDNLMIGNFYQVQVIDSDEFDLFGE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: KTIDIITLGCSKNLVDSEQLMRQLEEAGYDVTHDSEKPTGEIAVINTCGFIGDAKEESINMILEFAQEKEEGNLEKLFVMGCLSERYLKELAIEIPQVDKFYGKFNWKGLLQDLGKAY
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal
Protein sequence:
MAQWNQLQQLDTRYLEQLHQLYSDSFPMELRQFLAPWIESQDWAYAASKESHATLVFHNLLGEIDQQYSRFLQESNVLYQHNLRRIKQFLQVSEFRCVWAKAQRVGRECGNTLHQGGQANHPTAAVVTEKQQMLEQHLQDVRKRVQDLEQKMKVVENLQDDFDFNYKTLKSQGDMQDLNGNNQSVTRQKMQQLEQMLTALDQMRRSIVSELAGLLSAMEYVQKTLTDEELADWKRRQQIACIGGPPNICLDRLENWITSLAESQLQTRQQIKKLEELQQKVSYKGDPIVQHRPMLEERIVELFRNLMKSAFVVERQPCMPMHPDRPLVIKTGVQFTTKVRLLVKFPELNYQLKIKVCIDKDSGDVAALRGSRKFNILGTNTKVMNMEESNNGSLSAEFKHLTLREQRCGNGGRANCDASLIVTEELHLITFETEVYHQGLKIDLEVNHSLPVVVISNICQMPNAWLLPRDLLTDVWVGRGPDWQFSSTTKRGRRKLLGSAISPLLPPACPEKGSRPGVNYSGCQITWAKFCKENMAGKGFSFWVWLDNIIDLVKKYILALWNEGYIMGFISKERERAILSTKPPGTFLLRFSESSKEGGVTFTWVEKDISGKTQIQSVEPYTKQQLNNMSFAEIIMGYKIMDATNILVSPLVYLYPDIPKEEAFGKYCRPESQEHPEADPGSAAPYLKTKFICVTPTTCSNTIDLPMSPRTLDSLMQFGNNGEGAEPSAGGQFGEYLVDRLCPYKGSWSPLYDALTCTHRELVTQNGR

Annotated regions:
phrase: EQHLQDVRKRVQDLEQKMKVVENLQDDFDFNYKTLKSQGDMQDLNGNNQSVTRQKMQQLEQMLTALDQMRRSIVSELAGLLSAMEYVQKTLTDEELADWKRRQQIACIGGPPNICLDRLENWITSLAESQLQTRQQIKKLEELQQKVSYKGDPIVQHRPMLEERIVEL
type: DOMAIN
name: STAT_TF_alpha
description: STAT transcription factor, all-alpha domain

phrase: AQWNQLQQLDTRYLEQLHQLYSDSFPMELRQFLAPWIESQDWAYAASKESHATLVFHNLLGEIDQQYSRFLQESNVLYQHNLRRIKQFL
type: DOMAIN
name: STAT_TF_prot_interaction
description: STAT transcription factor, protein interaction

phrase: YIMGFISKERERAILSTKPPGTFLLRFSESSKEGGVTFTWVEKDISGKTQIQSVEPYTKQQLNNMSF
type: DOMAIN
name: SH2
description: SH2 domain

phrase: WQFSSTTKRGRRKLLGSAISPLLPPACPEKGSRPGVNYSGCQITWAKFCKENMAGKGFSFWVW
type: DOMAIN
name: STAT_linker
description: Signal transducer and activator of transcription, linker domain

phrase: WNEGYIMGFISKERERAILSTKPPGTFLLRFSESSKEGGVTFTWVEKDISGKTQIQSVEPYTKQQLNNMSFAEIIMGYKIMDATNILVSP
type: DOMAIN
name: SH2
description: SH2 domain

phrase: QPCMPMHPDRPLVIKTGVQFTTKVRLLVKFPELNYQLKIKVCIDKDSGDVAALRGSRKFNILGTNTKVMNMEESNNGSLSAEFKHLTLREQRCGNGGRANCDASLIVTEELHLITFETEVYHQGLKIDLEVNHSLPVVV
type: DOMAIN
name: STAT_TF_DNA-bd
description: STAT transcription factor, DNA-binding

phrase: MAGKGFSFWVWLDNIIDLVKKYILALWNEGYIMGFISKERERAILSTKPPGTFLLRFSESSKEGGVTFTWVEKDISGKTQIQSVEPYTKQQLNNMSFAEIIMGYKIMDATNILVSPLVYLYPDIPKEEAFGKYCRPESQEHPEADPGSAAPYLKTKFICVT
type: DOMAIN
name: STAT3_SH2
description: STAT3, SH2 domain

phrase: AQWNQLQQLDTRYLEQLHQLYSDSFPMELRQFLAPWIESQDWAYAASKESHATLVFHNLLGEIDQQYSRFLQESNVLYQHNLRRIKQFLQVSEFRCVWAKAQR
type: DOMAIN
name: STAT_TF_prot_interaction
description: STAT transcription factor, protein interaction
Protein sequence:
MGFSLTDYAPYDFANRRHIGPSPKEMGQMLATLGVPSLEALINEALPEGIRRRDPLAFGPALSERDTLHRMRELADKNTVLTSLIGQGYHGTHTPPVILRNILENPAWYTAYTPYQPEISQGRLEALLNFQTMMADLTGLPIANASLLDEGTAAAEAMAMAQRASKSKARGFFVAEDCHPQTIDVIRTRAEPLGIEVIVGAVDALDPEAVFAALFQYPGSYGHVRDYSDVIEALHGARALAVVAADPLALTLLKSPGEMGADIAIGSTQRFGVPMGYGGPHAAYMTCTDALKRSMPGRIIGVSVDARGNKAYRLSLQTREQHIRREKANSNVCTAQALLAVMASMYGVFHGPDGLKAIAQTVHRKTARMADGLTELGFKVDPQDYFDTITVKVGSMQGVILAAALREGVNLRKVGTDRIGITLDELTLGRTIEAVWRAFGAEGMVYDKTRMVYHLPQEMLRESSYMTHPIFHMNRAEAEMTRYMRRLADRDLALDRAMIPLGSCTMKLNATVEMLPLTWPEFANLHPFAPADQAAGYHEMIAELSQMLCDVTGYDAMSMQPNSGAQGEYAGLLAIRGYHRARGEGHRNICLIPTSAHGTNPASAQMVGWKVVVVKSAENGDIDLEDFRAKAEQHSENLAGCMITYPSTHGVFEEIVREVCDITHAHGGQVYIDGANMNAMVGLSAPGDLGGDVSHLNLHKTFCIPHGGGGPGMGPIGVKAHLAPHLPSHATATGAGFGDAGAVASAAYGSPSILTISYAYCLLMGGAGLTQATKVAILNANYMAKRLSAGFPILYANDKGRVAHECILDTRVLDKIAGVTVEDVAKRLMDCGFHAPTMSWPVAGTLMVEPTESEPKAELDRFCDAMLAIREEADAIAAGSLDAENNPLKRAPHTVEDLVGDWDRPYSREQACYPPGAFRVDKYWPPVNRVDNAYGDRNLVCTCPPVEDYAEPAE

Annotated regions:
phrase: LPQEMLRESSYMTHPIFHMNRAEAEMTRYMRRLADRDLALDRAMIPLGSCTMKLNATVEMLPLTWPEFANLHPFAPADQAAGYHEMIAELSQMLCDVTGYDAMSMQPNSGAQGEYAGLLAIRGYHRARGEGHRNICLIPTSAHGTNPASAQMVGWKVVVVKSAENGDIDLEDFRAKAEQHSENLAGCMITYPSTHGVFEEIVREVCDITHAHGGQVYIDGANMNAMVGLSAPGDLGGDVSHLNLHKTFCIPHGGGGPGMGPIGVKAHLAPHL
type: DOMAIN
name: GDC-P_N
description: Glycine cleavage system P-protein, N-terminal domain

phrase: RRHIGPSPKEMGQMLATLGVPSLEALINEALPEGIRRRDPLAFGPALSERDTLHRMRELADKNTVLTSLIGQGYHGTHTPPVILRNILENPAWYTAYTPYQPEISQGRLEALLNFQTMMADLTGLPIANASLLDEGTAAAEAMAMAQRASKSKARGFFVAEDCHPQTIDVIRTRAEPLGIEVIVGAVDALDPEAVFAALFQYPGSYGHVRDYSDVIEALHGARALAVVAADPLALTLLKSPGEMGADIAIGSTQRFGVPMGYGGPHAAYMTCTDALKRSMPGRIIGVSVDARGNKAYRLSLQTREQHIRREKANSNVCTAQALLAVMASMYGVFHGPDGLKAIAQTVHRKTARMADGLTELGFKVDPQDYFDTITVKVGSMQGVILAAALREGVNLRKVGTDRIGITLDELTLGRTIEAVWRA
type: DOMAIN
name: GDC-P_N
description: Glycine cleavage system P-protein, N-terminal domain

phrase: ATKVAILNANYMAKRLSAGFPILYANDKGRVAHECILDTRVLDKIAGVTVEDVAKRLMDCGFHAPTMSWPVAGTLMVEPTESEPKAELDRFCDAMLAIREEADAIAAGSLDAENNPLKRAP
type: DOMAIN
name: GDC-P_C
description: Glycine dehydrogenase, C-terminal domain
Protein sequence:
MALETCFRAWATLHAPQPPSSGGSRDRLLLSGAGSSQSKPRLSVASPSPLRPASRFACQCSNVVDEVVVADEKNWDSMVLGSEAPVLVEFWAPWCGPCRMIAPVIDELAKEYVGKIKCCKVNTDDSPNIATNYGIRSIPTVLMFKNGEKKESVIGAVPKTTLATIIDKYVSS

Annotated regions:
phrase: LVEFWAPWCGPCRMIAPV
type: CONSERVED_SITE
name: Thioredoxin_CS
description: Thioredoxin, conserved site

phrase: PSPLRPASRFACQCSNVVDEVVVADEKNWDSMVLGSEAPVLVEFWAPWCGPCRMIAPVIDELAKEYVGKIKCCKVNTDDSPNIATNYGIRSIPTVLMFKNGEKKESVIGAVPKTTLATIIDKYV
type: DOMAIN
name: Thioredoxin_domain
description: Thioredoxin domain

phrase: VVVADEKNWDSMVLGSEAPVLVEFWAPWCGPCRMIAPVIDELAKEYVGKIKCCKVNTDDSPNIATNYGIRSIPTVLMFKNGEKKESVIGAVPKTTLATII
type: DOMAIN
name: Thioredoxin_domain
description: Thioredoxin domain
Protein sequence:
MAPIRVLSLVLPILSTVTLLLTQFGECNNGRRSGDAVDTDFSGFSVPLEHSFEVDDVPRFRLRGALQFRGGRENSVYLSQNQLSEKDRNTLKDVAAVDGLYRIRVPRVSLQVDRQTERQYEGYLTAFVRACALVESHLSDVITLHTDVSGYVIGISIVTIPGSCRGIEVEDEVDLEVFNTTISVMAPVTAPVPETAPYIERMEMEMEKKGKNPQEQKSFFAKYWMYIVPLVLFLMMSGAQDQSGGGAGGGAANGGGR

Annotated regions:
Protein sequence:
MKTLVILSSILGDRSNSKQLADHLLARLKQSEPGGTVKIRDLAADPVPYFDGATVGALFTPAEARNAEQQRIAALSDDLVAELFDADRIVFAVPVYNFNLPAQFKSYIDHIARAGVTFRYTAEGKPEGLVQGKQVLMLIARGGKSEGTPDDTMTPYLKQMLAFLGMTDVTFIAAEGMAMGELAAQEGLALARQRIDALSLDARQGLAAA

Annotated regions:
phrase: MKTLVILSSILGDRSNSKQLADHLLARLKQSEPGGTVKIRDLAADPVPYFDGATVGALFTPAEARNAEQQRIAALSDDLVAELFDADRIVFAVPVYNFNLPAQFKSYIDHIARAGVTFRYTAEGKPEGLVQGKQVLMLIARGGKSEGTPDDTMTPYLKQMLAFLGMTDVTFIAAEGMAMGELAAQEGLALARQRID
type: DOMAIN
name: Flavodoxin_fold
description: Flavodoxin-like fold
Protein sequence:
MITVTEATATAGALQRLADQGVSVWLDDLSRRRIESGNLAELIRTKNVVGVTTNPSIFQAAIGSGEGYEEQLADLATRGVTVDEAVRMMTTADVRAAADVLRGVYDASGGRDGRVSIEVDPRLAHDTAATVAEARQLSWLVDRPNVMIKIPATKAGLPAITEVIGAGISVNVTLIFSLERYREVMDAYLAGLEKAQAAGIDLAGIHSVASFFVSRVDSEIDKRLSLLGTEEALGLRGRAALANARLAYEAYENVFAGDRFTALAGARANAQRPLWASTGVKDPAFRDTLYVEELVAPGTVNTMPEATLDAAADHGDVRGDTVTGGYAQARADLAAVERLGVSYDEVVEQLEQEGVAKFEAAWQELLAAVTKSLDSKGVDGE

Annotated regions:
phrase: GVTTNPSI
type: ACTIVE_SITE
name: Transaldolase_AS
description: Transaldolase, active site

phrase: VMIKIPATKAGLPAITE
type: ACTIVE_SITE
name: Transaldolase_AS
description: Transaldolase, active site
Protein sequence:
MGARASVLTGGKLDAWEKIRLRPGGRKSYKIKHLVWASRELERFALNPDLLETAEGCQQIMRQLQPSLQTGTEEIKSLYNAVATLYCVHQRIEVKDTKEALEEVEKIQKKSQEKIQQAAMDKGNSNQVSQNYPIVQNAQGQMVHQAITPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNLMLNTVGGHQAAMQMLKDTINEEAAEWDRMHPQQAGPFPPGQIREPRGSDIAGTTSSLQEQITWMTGNPPIPVGEIYKRWIILGLNKIVRMYSPVSILDIRQGPKEPFRDYVDRFFKCLRAEQASQDVKGWMTDTLLVQNANPDCKTILRALGQGASLEEMMTACQGVGGPSHKARVLAEAMSQASGAAAAIMMQRSNFKGPRRTIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQANFLGKIWPSNKGRPGNFLQNRTEPTAPPAESLGFGEEIAPSPKQEMKEKELYPSLKSLFGSDP

Annotated regions:
phrase: PVSILDIRQGPKEPFRDYVDRFFKCLRAEQASQDVKGWMTDTLLVQNANPDCKTILRALGQGASLEEMMTACQGVGGPSHKARVLAEAMSQASGAAAAIMMQRSNFKGPRRTIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQANFLGKIWPSNKGRPGNFL
type: DOMAIN
name: Primate_lentivir_Gag_pol-like
description: Primate lentivirus group Gag polyprotein-like

phrase: CWKCGKEGHQMKDCT
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: RASVLTGGKLDAWEKI
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: RPGGRKSYKIKHLVWASR
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: ERFALNPDLLETAEG
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: TGTEEIKSLYNAVATLYCV
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: HQRIEVKDTKEAL
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: KCFNCGKEGHLARNC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: YSPVSILDIRQGPKEPFRDYVDRFFKCLRAEQASQDVKGWMTDTLLVQNANPDCKTILRALGQGASLEEMMT
type: DOMAIN
name: Gag_p24_C
description: Retroviral nucleocapsid Gag protein p24, C-terminal domain

phrase: GARASVLTGGKLDAWEKIRLRPGGRKSYKIKHLVWASRELERFALNPDLLETAEGCQQIMRQLQPSLQTGTEEIKSLYNAVATLYCVHQRIEVKDTKEALEEVEKIQKKSQEKIQQAAMDKGNSNQVSQN
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: KCFNCGKEGHLARNCR
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: GCWKCGKEGHQMKDCT
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: LQNRTEPTAPPAESLGFGEEIAPSPKQEMKEKELY
type: DOMAIN
name: Gag_p6
description: Gag protein p6

phrase: IKCFNCGKEGHLARNC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: GCWKCGKEGHQMKDCT
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type
Protein sequence:
MASLSGPISPINLEMFKPGVEELNPSKLLLLSNHQEGMLYPTILGSLELLSFKRERSLNLQRDKVCLLHQESQLLKLRGTGTDTTDVPLKQPMATSVNCCHDGIFTILEQDRMPKTSMAPTLTESTGSLVTRLMSIPRLTFSIGTQVAMRLFRLGFRLARYSLRVTILKAQEGLLLIPDLLHAHPVEPLVQDRAVEPILAIEPLPLV

Annotated regions:
phrase: LLKLRGTGTDTTDVPLKQPMATSVNCCHDGIFTILEQDRMPKTSMAPTLTESTGSLVTRLMSIPRLTFSIGTQVAMRLFRLGFRLARYSLRVTILKAQEGLLLIPDLLHAHPVE
type: DOMAIN
name: N2-like_embe-CoV
description: Accessory protein N2-like
Protein sequence:
MDKFVKLTGVAAPLPVVNIDTDMIIPKDYLKTIKRTGLGKGLFAEARYNEDGSENPDFVLNKPAYRDAKILVAGDNFGCGSSREHAPWALLDFGIRCVISTSFADIFYNNCFKNGILPIKVSQEDLDKLMDDASRGSNAILTVDLENLEITGPDGGSIKFDLDAFKRHCLLNGLDDIGLTMEKGKAIDEFEKKNAASHPWAA

Annotated regions:
phrase: MDKFVKLTGVAAPLPVVNIDTDMIIPKDYLKTIKRTGLGKGLFAEARYNEDGSENPDFVLNKPAYRDAKILVAGDNFGCGSSREHAPWALLDFGIRCVISTSFADIFYNNCFKNGILPIKVS
type: DOMAIN
name: AconitaseA/IPMdHydase_ssu_swvl
description: Aconitase A/isopropylmalate dehydratase small subunit, swivel domain

phrase: LPVVNIDTDMIIPKDYLKTIKRTGLGKGLFAEARYNEDGSENPDFVLNKPAYRDAKILVAGDNFGCGSSREHAPWALLDFGIRCVISTSFADIFYNNCFKNGILPIKVSQEDLDKLMDDASRGSNAILTVD
type: DOMAIN
name: IPMI_Swivel
description: 3-isopropylmalate dehydratase, swivel domain
Protein sequence:
MPSQAVTYTTAAVAAVATGFLAYAVYFDYKRRNDPEFRRQLRRSARRQARQEKEYAELSQQAQRQRIRQMVDEAKEEGFPTTSDEKEAYFLEQVQAGEILGQDPTKAIDASLAFYKALKVYPTPGDLISIYDKTVAKPILDILAEMIAYDPSLKIGTNYTGGVDVAELMREMASAPGVGLD

Annotated regions:
Protein sequence:
MFLKTESFEHNGVTVTLSELSALQRIEHLALMKRQAEQAESDSNRKFTVEDAIRTGAFLVAMSLWHNHPQKTQMPSMNEAVKQIEQEVLTTWPTEAISHAENVVYRLSGMYEFVVNNAPEQTEDAGPAEPVSAGKVFDGELSFALKLAREMGRPDWRAMLAGMSSTEYADWHRFYSTHYFHDVLLDMHFSGLTYTVLSLFFSDPDMHPLDFSLLNRREADEEPEDDVLMQKAAGLAGGVRFGPDGNEVIPASPDVADMTEDDVMLMTVSEGIAGGVRYG

Annotated regions:
phrase: ELSFALKLAREMGRPDWRAMLAGMSSTEYADWHRFYSTHYFHDVLLDMHFSGLTYTVLSLFFSDPDMHPLDFSLLNRREADEEPEDDVLMQKAAGLAGGVRFGPD
type: DOMAIN
name: Phage_tail_T
description: Minor tail T

phrase: MFLKTESFEHNGVTVTLSELSALQRIEHLALMKRQAEQAESDSNRKFTVEDAIRTGAFLVAMSLWHNHPQKTQMPSMNEAVKQIEQEVLTTWPTEAISHAENVVYRLSGMYEFVVNNAPEQTEDAGPAEPVSAGK
type: DOMAIN
name: Tail_assembly_G
description: Tail assembly protein G

phrase: MFLKTESFEHNGVTVTLSELSALQRIEHLALMKRQAEQAESDSNRKFTVEDAIRTGAFLVAMSLWHNHPQKTQMPSMNEAVKQIEQEVLTTWPTEAISHAENVVYRLSGMYEFVVNNAPEQTED
type: DOMAIN
name: Tail_assembly_G
description: Tail assembly protein G

phrase: SSTEYADWHRFYSTHYFHDVLLDMHFSGLTYTVLSLFFSDPDMHPLDFSLLNRREADEEPEDDVLMQKAAGLAGG
type: DOMAIN
name: Phage_tail_T
description: Minor tail T
Protein sequence:
MSIYRRYISKSVIFFSVFFVIFFLFIESSVGFKYIFNFTNRIFIGLKAEEISGNWRDFTLKNIKYDVFGISITANSLHIVLDTRSLFKMSTIFKKIETKNVILSLKKNTASNFSQNSLPSKISKNIFFIKYPIILKKIHADKILFTSPKVRVSFLDVLSGIKLVRNNIIFSPTYINTIHVSSAKFNFEKKNILNKSTIIKNFNKIKKIYSFSYFSSNQTKKNFPLNIYLKSLKCNKTQFIDYEYKNLLQVELQANIENNILQINKMKVDSSFLKMNSYGKVIFNNDYSISCVMNSKTVIPSLYNKSINFQLKANFNVDHQLIFKLISKDLYNMKINGLVFLNFSDYPFFIKLQSRNLSCVIKKNYIFKLKSFDGVLKGYINNYFFSLKNIFTLQDLPPIFIDIQGRGDLNNIFLKKINFFPIKQKKFYKKVIHPEDYIKYNQYILKLIGQINITGKSDRHTHYVHIPKIDLYANIMKKKLSILGALYYKNFNFIETPGINLLLGKNKLYLRGSLGKKYNIYSSIYANNLDYFFPKLQGRMQAKVNFLGNNKFPIISSKILARDLNWNNIYFKNIKVLTGININNTFSGKMLIYANKIHFYKFYINTLHIQTYSNNHKQNFSFLLKSNRLHINLIINGAFNNKTGHWHGFFKKINIRTFWGQVTAKKNNFIHYYDSHNSITNFYQKSIKKRNCFSSFLYNVKMSFFNLFNRSFISFESKLSINAKLKLILGKMISDGAIFLKGNNTKLEKKINKKIFIQNIDFFKISMNLIKNDFKSKWIIKKNKKLSNNKNIFGYLNIIDIYNKKNIKGEFIFYKFPFSFINFFTTNFKEVSGKFQSKIKLFGTLYQPKVLADVHFKNIFIRSNNILKYITLFFPYFLGKVDNIKINQEIMMNKGNILFTLKPFFKNNSADIEWNIAFNSKKISVLIFPKIKVKFSSKLNLHYLFSKYDLIGYIKFSLFYFQINEKNFIF

Annotated regions:
Protein sequence:
MKILLATQNLGKYKEIKRMLEPLGVEVILPEEKLNVEEKGNSFMENAYIKAMAYFEKYRIPTLADDSGLVVPSLGGYPGVFSSRFYSIDWGGREEIQTSEDEANIRKLLRLMKDVSDRRAYFRAVLCLVLEEGLSIFSEGTCEGEIVHSPRGSGGFGYDPIFKPKSYEKTMAELSPEEKDLISHRGKALRKLKEFLELWKKCG

Annotated regions:
Protein sequence:
MDRVLSRADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTFKTEVYNLRMNLGGTGFQVRRLHADGWNLSTKDTFGDRYYQRFCRMPLTCLVNVKYSSCSCILCLLRKQHRELKDKCDARCLVLGECFCLECYMQWFGTPTRDVLNLYADFIASMPIDWLDLDVHSVYNPRTRSEELRRAATVHYTMTTGHSAMEASTSQGNGMISSESGTPAISRRLRLPSLLSNPTYSVMRSHSFPPTRVLQQIHPHILLEDDETLVLLSPMTAYPRTPPELLYPESDQDQLEPLEEEEEEYMPMEDLYLDILPEEQVPQLIPPPIIPRAGLSPWEGLILRDLQRAHFDPILEASQRMRATHRAALRAHSMQRHLRRLGRTLLLVTFLAALLGICLMLFILIKRSRHF

Annotated regions:
phrase: TKDTFGDRYYQRFCRMPLTCLVNVKYSSCSCILCLLRKQHRELKDKCDARCLVLGECFCLECYMQWFGTPTRDVLNLYADFIASMPIDWLD
type: DOMAIN
name: Papo_T_antigen
description: Small/middle T-antigen

phrase: ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTFKTEV
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain
Protein sequence:
MATPDQDVRNRKINPEARMELKEHLREFRDRLIKAAIATIIAAIIGTVFLYQPFIEMISAPLQQINIETGRRANLNYGSVASPFDQLLKVGMYIGLVIASPVWLYQALRFLLPALHTKEKKYLFGFLTASIFAFACGVAISYFTLPGVVYALLKFTPVNESNYIDAGVYISFILKFVVTFSCAFIIPVILVGINMLGLIRGKTILKSWRWVVVLVAVIAALTAPGSDIMMMFVLMAPLLIFFFAAIGICMINDKRRDRKLAKLAQGSDEASLNTATSSEDLAKMGYFEEEKTS

Annotated regions:
Protein sequence:
MESPTSTFQFDTIESALHDLAAGRAIVVVDDENRENEGDVICAAQFATPDMINFMAVEARGLICLAMTGDRLDQLELPLMVGPSAFEDENEQTAFTVSIDAALHWGVTTGISADDRARTIQVAIHPSARPQDLRRPGHIFPLRAKEGGVLKRAGHTEAGVDLARMAGLYPAGVICEIQNPDGSMARLPELVGYAQDHNLKLISIADLISYRLQHERFLQREAVAELPTQFGHFQIYAYRNLLDGSEHVAMVKGDPASFKESPVMVRVHSECLTGDAFGSLRCDCRMQLQAALKMIATAERGVVVYLRQEGRGIGLVNKLKAYSLQDMGLDTVEANEKLGLPVDQRNYGIGAQILNDIGVRQFCLITNNPRKIAGIKGYGLEMIDRVPLIIEATPYNSTYLETKAQKMGHMLIQTYLITIAVHWQQEQLPVTARYGQLEALRALGRHHELLVQEEARSVAIALFTRADLILHVGVDQPRAVPEKWYRDCQHPQLQAIATILDKLATWPELERLEFLISDGTDPFRGLQERLDRQVFHLKPARGSIIKPSDLCQSLETQRVYVFATHDSDGTLN

Annotated regions:
phrase: REAVAELPTQFGHFQIYAYRNLLDGSEHVAMVKGDPASFKESPVMVRVHSECLTGDAFGSLRCDCRMQLQAALKMIATAERGVVVYLRQEGRGIGLVNKLKAYSLQDMGLDTVEANEKLGLPVDQRNYGIGAQILNDIGVRQFCLITNNPRKIAGIKGYGLEMIDRV
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MTVDYKNTLNLPETGFPMRGDLAKREPNMLKSWYEKDLYQKIRQASKGKKSFILHDGPPYANGTIHIGHAVNKILKDIIVKSKTALGYDSPYIPGWDCHGLPIELKVEGLVGKPNQNISAAQFREACRQYAAEQVEGQKKDFIRLGVLGDWDNPYLTMNYHTEANIIRAFGKAVENGHLYKGSKPVHWCLDCASSLAEAEVEYEDKVSPSIYVRFSAVDSDAVLAKFNATDKGTGNISAVIWTTTPWTIPSNRAIAIHENLDYQLVQFNDERVILAKDLVEEVAKAAGVEQVVILGESKGKDLEWLRFQHPFYDFSVPFILGDHVTTDGGTGLVHTAPDHGHDDYIIAQKNGIEMAGLIGNDGLFKADVPFFAGKGVFESNDLVVAKLQEVGAMLKFSKIKHSYPHCWRHKTPIIFRATPQWFIGMEKQGLRQQALSEIKKVRWIPDWGQARIEKMVENRPDWCISRQRTWGVPVALFIHKETEELHPRTVELVEEVAKRVEQKGIQAWWDLDTAELLGADADNYIKVPDTLDVWFDSGSTYYSVVKDRPEFNGQEADMYLEGSDQHRGWFMSSLMLSTATDNKAPYKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDYTGEISVSDEILKRAADAYRRIRNTARFLLANLNGFDPKRDLVKPEEMMVLDRWAVDCAYQAQNEIKDAYDNYQFHAVIQRLMKFCSIEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEALVRWIAPVLSFTADEIWQYIPGERGEFVFTEEFYNGLFALDANEQMNDAYWQQVITLRNEVNRVLEQARNDKIIGAALEAELTIYANDTYAPLLAKLQNELRFVLLTSKAEVKPLADADVAEGEVKGFAVKVVRSANHKCPRCWHYSDSKDAESLCSRCDENVNGQGEVRQFA

Annotated regions:
phrase: MLKSWYEKDLYQKIRQASKGKKSFILHDGPPYANGTIHIGHAVNKILKDIIVKSKTALGYDSPYIPGWDCHGLPIELKVEGLVGKPNQNISAAQFREACRQYAAEQVEGQKKDFIRLGVLGDWDNPYLTMNYHTEANIIRAFGKAVENGHLYKGSKPVHWCLDCASSLAEAEVEYEDKVSPSIYVRFSAVDSDAVLAKFNATDKGTGNISAVIWTTTPWTIPSNRAIAIHENLDYQLVQFNDERVILAKDLVEEVAKAAGVEQVVILGESKGKDLEWLRFQHPFYDFSVPFILGDHVTTDGGTGLVHTAPDHGHDDYIIAQKNGIEMAGLIGNDGLFKADVPFFAGKGVFESNDLVVAKLQEVGAMLKFSKIKHSYPHCWRHKTPIIFRATPQWFIGMEKQGLRQQALSEIKKVRWIPDWGQARIEKMVENRPDWCISRQRTWGVPVALFIHKETEELHPRTVELVEEVAKRVEQKGIQAWWDLDTAELLGADADNYIKVPDTLDVWFDSGSTYYSVVKDRPEFNGQEADMYLEGSDQHRGWFMSSLMLSTATDNKAPYKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMDKFGGDILRLWVASTDYTGEIS
type: DOMAIN
name: aa-tRNA-synth_Ia
description: Aminoacyl-tRNA synthetase, class Ia

phrase: DRWAVDCAYQAQNEIKDAYDNYQFHAVIQRLMKFCSIEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEALVRWIAPVLSFTADEIWQYIPGERGEFVFTEEFYNGLFALDANEQMNDAYWQQVITLRNEVNRVLEQARNDKIIGAALEAEL
type: DOMAIN
name: M/V/L/I-tRNA-synth_anticd-bd
description: Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding

phrase: PYANGTIHIGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: VSDEILKRAADAYRRIRNTARFLLANLNGFDPKRDLVKPEEMMVLDRWAVDCAYQAQNEIKDAYDNYQFHAVIQRLMKFCSIEMGSFYLDIIKDRQYTTKADSLARRSCQTALWHIAEALVRWIAPVLSFTADEIWQYIPGERGEFVFTEEFYNGLFALDANEQMNDAYWQQVITLRNEV
type: DOMAIN
name: Anticodon_Ile_BEm
description: Isoleucyl tRNA synthetase type 1, anticodon-binding domain
Protein sequence:
MERLNRNRSYQEELNFIEKINDYSYRIKLGFVPNMKVEGLFYADLPLEHLMFEELQHFCSCNGVGGFLPGVKQIGNVAALPGIVGKSIGLPDIHSGYGFAIGNIAAFDVANPKAIVSPGGVGFDINCGVRLIRTNLHERDVNPMKETLAQSLFDHIPVGVGSRGIIPMNARDLDEALEMGMDWSLREGYAWAEDKEHCEEYGRMLQADSNKISLRAKKRGLPQLGTLGAGNHYAEIQAVDEIYDSFAAKSMGINRRGQICIMVHSGSRGLGHQVATDALFNMEKAMIKDGINVNDRQLACARIASDEGQNYLKGMAAAANYAWVNRSSMTFLARQAFAKCFHTTPDDLDMHVIYDVSHNIAKIEEHVVNGKLSTLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLIGGTMGTCSFVMTGTSQGMSETYGTTCHGAGRALSRAKARRSLNYQEVLDRLNASGISIRVASPKLVMEEAPESYKDVTNVVETCHLAGISKKCFKLRPIAVIKG

Annotated regions:
Protein sequence:
MAESEGSNTENGKVGAVKSENLDRGVAAIKNQFLTTKEKFHAFIDADGKDVTEKETCSELSLNDAENTTRTENAAEPEAKRIKLDDGSSEGQDQPPKTAENKQEKKRARGQNKSRPHMKHSQFEENKLCPSVTQECASKCFFGDKCKFSHDVAKYVSQKPEDIRPNCHLYETFGKCIYGVTCRFAKSHLGEDFKNIINEELMKEWEGKVLVKNSLDKSLKEQLRKKKVVFEKSDKYLKLCFKSGDSSKMKNPVVKEDSAVQVTQKDSPITTVGAVTDEDVIKLRPCEKKTIDFRNKLYLAPLTTCGNLPFRRICKRLGADITCGEMAMCTNLLQGQPSEWALLKRHHSEDIFGVQLEGAFPDTMTKCAELLNRTIDVDFVDINVGCPIDLVYKKGGGCGLMNRTNKFEQIVKGMNSVLDVPLTVKIRTGVQEKVNIAHKLIPNLRDWGVSLVTLHGRSREQRYTKLANWEYIDQCAKIASPVPLFGNGDIISYEDANRALQTGVAGVMLARGALFKPWLFTEIKEQRHWDISSTERFDILKDFTNYGLEHWGSDCQGVEKTRKFMLEWLSFLCRYIPVGLLEHVPQKINERPPYYMGRDYLETLMASQNVTDWIKISEMLLGPVPPNFTFLPKHKANSYK

Annotated regions:
phrase: EDIRPNCHLYETFGKCIYGVTCRFAKSHLG
type: DOMAIN
name: Znf_CCCH
description: Zinc finger, CCCH-type

phrase: VDINVGCPIDLVYKKGGG
type: CONSERVED_SITE
name: tRNA_hU_synthase_CS
description: tRNA-dihydrouridine synthase, conserved site

phrase: FEENKLCPSVTQECASKCFFGDKCKFSHDV
type: DOMAIN
name: Znf_CCCH
description: Zinc finger, CCCH-type

phrase: LAPLTTCGNLPFRRICKRLGADITCGEMAMCTNLLQGQPSEWALLKRHHSEDIFGVQLEGAFPDTMTKCAELLNRTIDVDFVDINVGCPIDLVYKKGGGCGLMNRTNKFEQIVKGMNSVLDVPLTVKIRTGVQEKVNIAHKLIPNLRDWGVSLVTLHGRSREQRYTKLANWEYIDQCAKIASPVPLFGNGDIISYEDANRALQTGVAGVMLARGALFKPWLFTEIKEQRHWD
type: DOMAIN
name: DUS-like_FMN-bd
description: DUS-like, FMN-binding domain

phrase: KLYLAPLTTCGNLPFRRICKRLGADITCGEMAMCTNLLQGQPSEWALLKRHHSEDIFGVQLEGAFPDTMTKCAELLNRTIDVDFVDINVGCPIDLVYKKGGGCGLMNRTNKFEQIVKGMNSVLDVPLTVKIRTGVQEKVNIAHKLIPNLRDWGVSLVTLHGRSREQRYTKLANWEYIDQCAKIASPVPLFGNGDIISYEDANRALQTGVAGVMLARGALFKPWLFTEIKEQR
type: DOMAIN
name: DUS-like_FMN-bd
description: DUS-like, FMN-binding domain

phrase: KLCPSVTQECASKCFFGDKCKFSH
type: DOMAIN
name: Znf-CCCH_4
description: E3 ligase, CCCH-type zinc finger