nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTDLHTDVERYLRYLSVERQLSPITLLNYQRQLEAIIHFASENGLQSWQQCDVTMVRNFAVRSRRKGLGAAGLALRLSALRSFFDWLVSQNELKANPAKGVSAPKAPRHLPKNIDVDDMSRLLDIDINDPLAVRDRAMLEVMYGAGLRLSELVGLDIKHLDLESGEVWVMGKGSKERRLPIGRNAVAWIEHWLDLRDLFGSEDDALFLSKLGKRISARNVQKRFAEWGIKQGLNNHVHPHKLRHSFATHMLESSGDLRGVQELLGHANLSTTQIYTHLDFQHLASVYDAAHPRAKRGK

Annotated regions:
phrase: VERYLRYLSVERQLSPITLLNYQRQLEAIIHFASENGLQSWQQCDVTMVRNFAVRSRRKGLGAAGLALRLSALRSFFDWLVS
type: DOMAIN
name: Integrase_SAM-like_N
description: Integrase, SAM-like, N-terminal

phrase: HLPKNIDVDDMSRLLDIDINDPLAVRDRAMLEVMYGAGLRLSELVGLDIKHLDLESGEVWVMGKGSKERRLPIGRNAVAWIEHWLDLRDLFGSEDDALFLSKLGKRISARNVQKRFAEWGIKQGLNNHVHPHKLRHSFATHMLESSGDLRGVQELLGHANLSTTQIYTHLDFQHLASVY
type: DOMAIN
name: Integrase_catalytic
description: Integrase, catalytic domain

phrase: TDLHTDVERYLRYLSVERQLSPITLLNYQRQLEAIIHFASENGLQSWQQCDVTMVRNFAVRSRRKGLGAAGLALRLSALRSFFDWL
type: DOMAIN
name: CB
description: Core-binding (CB) domain

phrase: NIDVDDMSRLLDIDINDPLAVRDRAMLEVMYGAGLRLSELVGLDIKHLDLESGEVWVMGKGSKERRLPIGRNAVAWIEHWLDLRDLFGSEDDALFLSKLGKRISARNVQKRFAEWGIKQGLNNHVHPHKLRHSFATHMLESSGDLRGVQELLGHANLSTTQIYTHLDFQ
type: DOMAIN
name: Integrase_catalytic
description: Integrase, catalytic domain
Protein sequence:
MLNTVEEAVAAIRAGEMVIVVDDEDRENEGDLVMAAEKVTPEAVNFMLRHGRGLICVPMTGERLDALDLPVMVPHGGDHMGTAFTVSVDAREGVTTGISAQDRARTIRLLADPGTRPEDLVRPGHIFPLRAKPGGVLRRPGHTEAAVDLCRLAGLAPVGVICEILNEDGTMARLPQLLDFARRHGLKIIAIADLIRYRMQHESLVDPLPPVRMPTRFGDFTAHPYEDRLTGETHVALVMGEVAGDEPVLVRVHSECLTGDVFHSLRCDCGEQLEAALAQIARAGRGVLLYMRQEGRGIGLANKFRAYRLQDEGLDTVEANLQLGFAPDARDYGTGAQILRHLGLRRLRLLTNNPHKQYSLQGYGLTIVERVPIEMPPNPVNRGYLETKRTKMGHLIGES

Annotated regions:
phrase: VRMPTRFGDFTAHPYEDRLTGETHVALVMGEVAGDEPVLVRVHSECLTGDVFHSLRCDCGEQLEAALAQIARAGRGVLLYMRQEGRGIGLANKFRAYRLQDEGLDTVEANLQLGFAPDARDYGTGAQILRHLGLRRLRLLTNNPHKQYSLQGYGLTIVERV
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
METSLISPMKENNTAQPQQREENTQQNLNAAVPIKQQSPGLLPEALEVGVKPDPASQILATQEIENPVAGFEGDSDKFHISTDEMAEHLQASDLWYCPDGSFVKKIIVHGHGLDKPKLGSKCRVLALGFPFGSGMPEGWTELTIGTGQWREKTWGELTEKCLESMRQGEEAKIHLPGSSTPLAKLRLDSFTNGRDSWELEAVEKEALAKEEHRRGTELFRAGNPQGAARCYGRALRLLLTLPPPGPPERTILHANLAACQLLLGHPQLAAQSCDRVLEREPGHLKALYRRGVAQAALGDLDKATADLKKVLAVDPKNRAAKEELGKVVIQGKIQDAGLARGLRKMFS

Annotated regions:
phrase: KALYRRGVAQAALGDLDKATADLKKVLAVDPK
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: LKALYRRGVAQAALGDLDKATADLKKVLAVDPK
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: AKEEHRRGTELFRAGNPQGAARCYGRALRLLLT
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: LKALYRRGVAQAALGDLDKATADLKKVLAVDPK
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: TILHANLAACQLLLGHPQLAAQSCDRVLEREPG
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat
Protein sequence:
MSIVKEFREFAMRGNVVDLAVGVIIGAAFGKIVSSLVADIIMPPLGLLIGGIDFKQFAVTLRDAQGDIPAVVMHYGVFIQNVFDFVIVAFAIFMAIKLINRLNRKKEEPAAVPPAPSKEEVLLTQIRDLLKEQNNRI

Annotated regions:
phrase: RGNVVDLAVGVII
type: CONSERVED_SITE
name: Mechanosensitive_channel_CS
description: Large-conductance mechanosensitive channel, conserved site
Protein sequence:
MRVGILGATGQVGAVMRRLLAERNFPVDELRYFASARSAGRTLPWGDTEITVEDSTEADYSGLDVVLASAGATASRALAERIAASGPVVIDNSSAFRMDDRVPLVVPEVNADALDDLPIGIVANPNCTTMVAMPVLKPLADEAGLEAIVVSTYQAVSGAGLSGVEELDSQVRKVGDDAPRLTHDGRAAEFGEPDNFVKPIAFNVLPFAGDLVDDGLEETNEEQKLRNESRKILGLPDLLVSGTCVRVPVFTGHSLSINARFSRPISPDRARELLAGAAGVQLADVPTPLDSAGIDDTLVGRIRVDPTVEHGLALFLSGDNLRKGAALNTIQIAEELLRRRS

Annotated regions:
phrase: VSGTCVRVPVFTGH
type: CONSERVED_SITE
name: Asp-semialdehyde_DH_CS
description: Aspartate-semialdehyde dehydrogenase, conserved site

phrase: LKPLADEAGLEAIVVSTYQAVSGAGLSGVEELDSQVRKVGDDAPRLTHDGRAAEFGEPDNFVKPIAFNVLPFAGDLVDDGLEETNEEQKLRNESRKILGLPDLLVSGTCVRVPVFTGHSLSINARFSRPISPDRARELLAGAAGVQLADVPTPLDSAGIDDTLVGRIRVDPTVEHGLALFLSGDNLR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: RVGILGATGQVGAVMRRLLAERNFPVDELRYFASARSAGRTLPWGDTEITVEDSTEADYSGLDVVLASAGATASRALAERIAASGPVVIDNSSAFRMDDRVPLVVPEVNADALDD
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: RVGILGATGQVGAVMRRLLAERNFPVDELRYFASARSAGRTLPWGDTEITVEDSTEADYSGLDVVLASAGATASRALAERIAASGPVVIDNSSAFRMDDRVPLVVPEVNADALD
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MLQCAPKKNERLRGSCDFCTQSKLRCNKNKPSCRRCTIQQQPCVYSVARRTGRPPKRPRKANDGQEANEQHGDQDPVTSTPGGSCQQQSNHLLDVEGDGANFTLADASTTAQDRETAACTALDNALLMGGTFGFSSLLDDPLIQSDDFLSFSLCMPPGEEEGHMASPCSPPILPSIDVPHLPARFGFLESSVESGLHGRNGPHLIEQPDKTVPSSFSEMEKIYDEGLTFSGLDSAINAVTNNGKGEPSIPGTMAAHPHSKRQCFCSTSMSKLQMLVSHPTLCQKNSRARFDMTLFLEEVVFSIYRDVLQCLVCQSKSLHSLASLCICTDWVIEALRDVAQDLSSGQDNLGGFRAGLCPPKDKFSICVGRFVLDDQLRESCTRSLVRYRLRKLIPIMDTMMKLNYRGAGGALSQAIRTMVEDVRHKIESALGMMEL

Annotated regions:
phrase: RLRGSCDFCTQSKLRCNKNKPSCRRCTIQQQPCVY
type: DOMAIN
name: Zn2Cys6_DnaBD
description: Zn(2)Cys(6) fungal-type DNA-binding domain

phrase: ERLRGSCDFCTQSKLRCNKNKPSCRRCTIQQQPCVYSVARRTGR
type: DOMAIN
name: Zn2Cys6_DnaBD
description: Zn(2)Cys(6) fungal-type DNA-binding domain

phrase: SCDFCTQSKLRCNKNKPSCRRCTIQQQP
type: DOMAIN
name: Zn2Cys6_DnaBD
description: Zn(2)Cys(6) fungal-type DNA-binding domain

phrase: SCDFCTQSKLRCNKNKPSCRRCTIQQQPCV
type: DOMAIN
name: Zn2Cys6_DnaBD
description: Zn(2)Cys(6) fungal-type DNA-binding domain

phrase: SCDFCTQSKLRCNKNKPSCRRCTIQQQPCVYSVAR
type: DOMAIN
name: Zn2Cys6_DnaBD
description: Zn(2)Cys(6) fungal-type DNA-binding domain
Protein sequence:
MSEKIYEFKDNDNWFVGKWNGYNSIEEVGNLINEDLARLNQVLSQLNTNTIEEQDWDNFGYAITVIKKSSDFSLISFVLDMINQETSSHLLARRHNGAILISDGSKVRAVILPKDGLKESDLFSDIASTAPKKLLVATHNKGKTEEFKALFAPLGYEVEDLNAYPELPEVKETGTTFEENARLKAESISKLTGKMVLADDSGLKVDILGGLPGVWSARFSGPDATDEKNNAKLLHELSMVFEQKDRSAQFHTTLVVAAPDCDSLVVEADWPGYIAFQPKGENGFGYDPLFIVGETGKHSAELSSQEKNALSHRGQAVKKLVEVFPKWQAKLSL

Annotated regions:
Protein sequence:
MTEQEKTSAVVEETREAVDTTSQPVATEKKSKNNTALILSAVAIAIALAAGIGLYGWGKQQAVNQTATSDALANQLTALQKAQESQKAELEGIIKQQAAQLKQANRQQETLAKQLDEVQQKVATISGSDAKTWLLAQADFLVKLAGRKLWSDQDVTTAAALLKSADASLADMNDPSLITVRRAITDDIASLSAVSQVDYDGIILKLNQLSNQVDNLRLADNDSDGSPMDSDGEELSSSISEWRINLQKSWQNFMDNFITIRRRDDTAVPLLAPNQDIYLRENIRSRLLVAAQAVPRHQEETYRQALENVSTWVRAYYDTDDATTKAFLDEVDQLSQQNISMDLPETLQSQAMLEKLMQTRVRNLLAQPAAGTTEAKPAPAPQADTPAAAPQGE

Annotated regions:
Protein sequence:
MKNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFKDLGFNVEVQPVPGTRNKFNMLASYGQGAGGLLLAGHTDTVPFDDGRWTRDPFTLTEHDGKLYGLGTADMKGFFAFILDALRDVDVTKLKKPLYILATADEETSMAGARYFAETTALRPDCAIIGEPTSLQPVRAHKGHISNAIRIQGQSGHSSDPARGINAIELMHDAIGHILQLRDNLKERYHYEAFTVPYPTLNLGHIHGGDASNRICACCELHMDIRPQPGMTLNELNGLLNDALAPVSERWPGRLTVDELHPPIPGYECPPNHQLVEVVEKLLGAKTEVVNYCTEAPFIQTLCPTLVLGPGSINQAHQPDEYLETRFIKPTRELIIQVIHHFCWH

Annotated regions:
phrase: AHKGHISNAIRIQGQSGHSSDPARGINAIELMHDAIGHILQLRDNLKERYHYEAFTVPYPTLNLGHIHGGDASNRICACCELHMDIRPQPGMTLNELNGLLNDALAPVS
type: DOMAIN
name: Peptidase_M20_dimer
description: Peptidase M20, dimerisation domain

phrase: LLLAGHTDT
type: CONSERVED_SITE
name: ArgE/DapE_CS
description: ArgE/DapE/ACY1/CPG2/YscS, conserved site

phrase: TADMKGFFAFILDALRDVDVTKLKKPLYILATADEET
type: CONSERVED_SITE
name: ArgE/DapE_CS
description: ArgE/DapE/ACY1/CPG2/YscS, conserved site
Protein sequence:
MVQKESQATLEERESELSSNPAASAGASLEPPAAPAPGEDNPAGAGGAAVAGAAGGARRFLCGVVEGFYGRPWVMEQRKELFRRLQKWELNTYLYAPKDDYKHRMFWREMYSVEEAEQLMTLISAAREYEIEFIYAISPGLDITFSNPKEVSTLKRKLDQVSQFGCRSFALLFDDIDHNMCAADKEVFSSFAHAQVSITNEIYQYLGEPETFLFCPTEYCGTFCYPNVSQSPYLRTVGEKLLPGIEVLWTGPKVVSKEIPVESIEEVSKIIKRAPVIWDNIHANDYDQKRLFLGPYKGRSTELIPRLKGVLTNPNCEFEANYVAIHTLATWYKSNMNGVRKDVVMTDSEDSTVSIQIKLENEGSDEDIETDVLYSPQMALKLALTEWLQEFGVPHQYSSRQVAHSGAKASVVDGTPLVAAPSLNATTVVTTVYQEPIMSQGAALSGEPTTLTKEEEKKQPDEEPMDMVVEKQEETDHKNDNQILSEIVEAKMAEELKPMDTDKESIAESKSPEMSMQEDCISDIAPMQTDEQTNKEQFVPGPNEKPLYTAEPVTLEDLQLLADLFYLPYEHGPKGAQMLREFQWLRANSSVVSVNCKGKDSEKIEEWRSRAAKFEEMCGLVMGMFTRLSNCANRTILYDMYSYVWDIKSIMSMVKSFVQWLGCRSHSSAQFLIGDQEPWAFRGGLAGEFQRLLPIDGANDLFFQPPPLTPTSKVYTIRPYFPKDEASVYKICREMYDDGVGLPFQSQPDLIGDKLVGGLLSLSLDYCFVLEDEDGICGYALGTVDVTPFIKKCKISWIPFMQEKYTKPNGDKELSEAEKIMLSFHEEQEVLPETFLANFPSLIKMDIHKKVTDPSVAKSMMACLLSSLKANGSRGAFCEVRPDDKRILEFYSKLGCFEIAKMEGFPKDVVILGRSL

Annotated regions:
phrase: FLCGVVEGFYGRPWVMEQRKELFRRLQKWELNTYLYAPKDDYKHRMFWREMYSVEEAEQLMTLISAAREYEIEFIYAISPGLDITFSNPKEVSTLKRKLDQVSQFGCRSFALLFDDIDHNMCAADKEVFSSFAHAQVSITNEIYQYLGEPETFLFCPTEYCGTFCYPNVSQSPYLRTVGEKLLPGIEVLWTGPKVVSKEIPVESIEEVSKIIKRAPVIWDNIHANDYDQKRLFLGPYKGRSTELIPRLKGVLTNPNCEFEANYVAIHTLATWYKSN
type: DOMAIN
name: O-GlcNAcase_cat
description: Beta-N-acetylglucosaminidase, catalytic domain

phrase: CGVVEGFYGRPWVMEQRKELFRRLQKWELNTYLYAPKDDYKHRMFWREMYSVEEAEQLMTLISAAREYEIEFIYAISPGLDITFSNPKEVSTLKRKLDQVSQFGCRSFALLFDDIDHNMCAADKEVFSSFAHAQVSITNEIYQYLGEPETFLFCPTEYCGTFCYPNVSQSPYLRTVGEKLLPGIEVLWTGPKVVSKEIPVESIEEVSKIIKRAPVIWDNIHANDYDQKRLFLGPYKGRSTELIPRLKGVLTNPNCEFEANYVAIHTLATWYKSNMNGVRK
type: DOMAIN
name: O-GlcNAcase_cat
description: Beta-N-acetylglucosaminidase, catalytic domain
Protein sequence:
MTVEAFISALNDAGITLTEQQIEQFQRYFELLVEANKQFNLTAITDEKDVYLKHFYDSLTVAIYVKALQHQSSTLIDVGTGAGFPSLPLKIAFPQLKITMVDALQKRVRFLQDVVDTLDLKNVSIVHGRAEDIGQNVAYREQFDFATARALARTSVLAEYTLPFVKVGGALLVMKGAAAEQELADGQQALATLGGTLSSAFDFKLPNGDQRVIQVVDKHKKTPKKYPRQAGTPNKKPIA

Annotated regions:
Protein sequence:
MTERTLILIKPDGVANGHVGEIISRIERKGLKLVEMDLRTADRATAEKHYEEHKDKPFFGELVDFITSAPLVAGIVEGESAIAAWRQLAGGTHPVEAATPGTIRGDFALTVGENVVHGSDSPESAEREIAIWFPNV

Annotated regions:
phrase: ERTLILIKPDGVANGHVGEIISRIERKGLKLVEMDLRTADRATAEKHYEEHKDKPFFGELVDFITSAPLVAGIVEGESAIAAWRQLAGGTHPVEAATPGTIRGDFALTVGENVVHGSDSPESAEREIAIWFP
type: DOMAIN
name: NDK-like_dom
description: Nucleoside diphosphate kinase-like domain

phrase: TERTLILIKPDGVANGHVGEIISRIERKGLKLVEMDLRTADRATAEKHYEEHKDKPFFGELVDFITSAPLVAGIVEGESAIAAWRQLAGGTHPVEAATPGTIRGDFALTVGENVVHGSDSPESAEREIAIWFPN
type: DOMAIN
name: NDK-like_dom
description: Nucleoside diphosphate kinase-like domain

phrase: NVVHGSDS
type: ACTIVE_SITE
name: Nucleoside_diP_kinase_AS
description: Nucleoside diphosphate kinase, active site
Protein sequence:
MNSLQNHLLIAMPSLQDTFFERSVIYLCEHDEKGAMGLMINRPIGIDVNELLKQMELDEEPDPITSLGSAVLIGGPVNQERGFVLHTPQTNWNNSQSLTDEIMLTTSRDVLTSLGTDAAPENFIVTLGYAGWSKDQLEQELAENTWLSIPATKELLFDIGFNDRWQQATESLGFDIWQLSNQSGHA

Annotated regions:
Protein sequence:
MIKLGNDWDELLKNEFNQPYYLTLRQFLKKEYQTKKVFPDMYDIFNALKHTAYKDVKVVILGQDPYHGPGQAHGLSFSVQQGVQIPPSLQNIYLELHNDLNCEIPNNGYLIPWADQGVLLLNTVLTVRAGQANSHRGQGWEILTNHIIEIINQKEEPVVFLLWGSNAKEKLQLLTNPKHTAFTSVHPSPLSASRGFMGCKHFSKTNQFLEQNGVKPIDWQIPSI

Annotated regions:
phrase: KVVILGQDP
type: ACTIVE_SITE
name: Ura-DNA_Glyclase_AS
description: Uracil-DNA glycosylase, active site

phrase: DVKVVILGQDPYHGPGQAHGLSFSVQQGVQIPPSLQNIYLELHNDLNCEIPNNGYLIPWADQGVLLLNTVLTVRAGQANSHRGQGWEILTNHIIEIINQKEEPVVFLLWGSNAKEKLQLLTNPKHTAFTSVHPSPLSASRGFMGCKHFSKTNQF
type: DOMAIN
name: Uracil-DNA_glycosylase-like
description: Uracil-DNA glycosylase-like

phrase: KHTAYKDVKVVILGQDPYHGPGQAHGLSFSVQQGVQIPPSLQNIYLELHNDLNCEIPNNGYLIPWADQGVLLLNTVLTVRAGQANSHRGQGWEILTNHIIEIINQKEEPVVFLLWGSNAKEKLQLLTNPKHTAFTSVHPSPLSASRGFMGCKHFSKTNQF
type: DOMAIN
name: Uracil-DNA_glycosylase-like
description: Uracil-DNA glycosylase-like
Protein sequence:
MFDFFKKTAQNISNFLGGGAKQQIEKELLEEVLIEADVDYEVIEQLLQHLPQNITRNQLEVGLDRFFRGESYYDKVSLKDIPTKPLVELIIGVNGAGKTTTIAKLAKRYKDSGKKVLLGAGDTFRAAAIDQLKLWSEKISVDIISTQYGSDPSALAYDTINAGSARKMDHIIIDTAGRLHNQTNLKNELLKITRVCSKALNNEPYRKILILDGTQGSSSINQAKIFHEMLKVDGVILTKLDGTSKGGAILSIIHALKLPIIAIGVGERAEDLLDFDQKDFINKLLDSIFEVK

Annotated regions:
phrase: PLVELIIGVNGAGKTTTIAKLAKRYKDSGKKVLLGAGDTFRAAAIDQLKLWSEKISVDIISTQYGSDPSALAYDTINAGSARKMDHIIIDTAGRLHNQTNLKNELLKITRVCSKALNNEPYRKILILDGTQGSSSINQAKIFHEMLKVDGVILTKLDGTSKGGAILSIIHALKLPIIAIGVGERAEDLLDFDQKDFINKLL
type: DOMAIN
name: SRP54_GTPase_dom
description: Signal recognition particle, SRP54 subunit, GTPase domain

phrase: KPLVELIIGVNGAGKTTTIAKLAKRYKDSGKKVLLGAGDTFRAAAIDQLKLWSEKISVDIISTQYGSDPSALAYDTINAGSARKMDHIIIDTAGRLHNQTNLKNELLKITRVCSKALNNEPYRKILILDGTQGSSSINQAKIFHEMLKVDGVILTKLDGTSKGGAILSIIHALKLPIIAIGVGERAEDLLDFDQK
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VELIIGVNGAGKTTTIAKLAKRYKDSGKKVLLGAGDTFRAAAIDQLKLWSEKISVDIISTQYGSDPSALAYDTINAGSARKMDHIIIDTAGRLHNQTNLKNELLKITRVCSKALNNEPYRKILILDGTQGSSSINQAKIFHEMLKVDGVILTKLDGTSKGGAILSIIHALKLPIIAIGVGERAEDLLDFDQKDFINKL
type: DOMAIN
name: SRP54_GTPase_dom
description: Signal recognition particle, SRP54 subunit, GTPase domain
Protein sequence:
MTKVIKSKYKVSRRLGTSVWGHEKDAINNKNYKPGQQGNSSSVSKPSDYSKHLVAKQRLKSHYGRIPEKQFRNTFKIARKKSGNTAENLVGLLERRLDAVVYRLNIAPTIFAARQLVSHKHIKVNGKKINIASYRVKAGDSIELSEQAKQIPIVIGAISKKARRIPEYLAFDDEKFIGNFIRMPSSISEVPYPFDPQINLVVEFYSA

Annotated regions:
phrase: RRLDAVVYRLNIAPTIFAARQLVSHKHIKVNGKKINIASYRVKAGDSIELSEQAKQIPIVIGAI
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: LERRLDAVVYRLNIAPTIFAARQL
type: CONSERVED_SITE
name: Ribosomal_uS4_CS
description: Small ribosomal subunit protein uS4, conserved site

phrase: RRLDAVVYRLNIAPTIFAARQLVSHKHIKVNGKKINIASYRVKAGDS
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: VIKSKYKVSRRLGTSVWGHEKDAINNKNYKPGQQGNSSSVSKPSDYSKHLVAKQRLKSHYGRIPEKQFRNTFKIARKKSGNTAENLVGLL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: KVIKSKYKVSRRLGTSVWGHEKDAINNKNYKPGQQGNSSSVSKPSDYSKHLVAKQRLKSHYGRIPEKQFRNTFKIARKKSGNTAENLVGLL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal
Protein sequence:
MVAPHEDPEDHVAPAAQRVRAGTLLLANTDLLEPTFRRSVIYIVEHNDGGTLGVVLNRPSETAVYNVLPQWAKLAAKPKTMFIGGPVKRDAALCLAVLRVGADPEGVPGLRHVAGRLVMVDLDADPEVLAAAVEGVRIYAGYSGWTIGQLEGEIERDDWIVLSALPSDVLVGPRADLWGQVLRRQPLPLSLLATHPIDLSRN

Annotated regions:
Protein sequence:
MKNNQEYILVVDIGNSYTKIGIFEKEKENTTSIILFPTDSETNIATLSKKMNVFKKYNIKHSIVGSVVPKLKPTYFKTIKKMFNIEPYYISETTKYSFLIDESPNKELGDDLKALCEYCVSVNKNCIGISFGTAIASVYLKNNSLVGASIAAGLGFGLNKLIEKASLLKKSKIDKFSSDFFGTNTISALESGINNLRSGFAYNFYNQAKKDNLNSDLKCIITGGESYNINISSFEYEINKEAILLGFKKIYFLNN

Annotated regions:
Protein sequence:
MTHWFHRNPLKATAPVSFNYYGMITGPPASKICNDLRSARTRLLELFTDLSCNPETMKNAADLYFSLLQGFINSVGDSTQESKLRYIQNFKWTDTLQGHVPSAQQDAVFELISMGFNVALWYTKYASRLAGKENITEDEAKEVHRSLKIAAGIFKHLKESHIPKLLTPAEKGRDLEARLIDAYIIQCQAEAQEVTIARAIELKHAPGLIAALAYETASFYQKADHTLSSLEPAHSAKWRKYLHLKMCFYTAYAYCYHGQTLLASDKCGEAIRSLQEAEKLYAEAEALCKEYGETKGPGPTAKPSGHLFFRKLGSLVKNTLDKCQRENGFIYFQKIPTEAPQLELKANYGLVEPVPFEFPPMSALWTPEALAAFDLTKRPKDDSIKPKPEEEVKPVKEPDIKPQKDTGCSVS

Annotated regions:
phrase: YFSLLQGFINSVGDSTQESKLRYIQNFKWTDTLQGHVPSAQQDAVFELISMGFNVALWYTKYASRLAGKENITEDEAKEVHRSLKIAAGIFKHLKESHIPKLLTPAEKGRDLEARLIDAYIIQCQAEAQEVTIARAIELKHAPGLIAALAYETASFYQKADHTLSSLEPAHSAKWRKYLHLKMCFYTAYAYCYHGQTLLASDKCGEAIRSLQEAEKLYAEAEALCKEYGETKGPGPTAKPSGHLFFRKLGSLVKNTLDKCQRENGFIYFQKIPTEAPQLELKANYGLVEPVP
type: DOMAIN
name: BRO1_dom
description: BRO1 domain

phrase: WFHRNPLKATAPVSFNYYGMITGPPASKICNDLRSARTRLLELFTDLSCNPETMKNAADLYFSLLQGFINSVGDSTQESKLRYIQNFKWTDTLQGHVPSAQQDAVFELISMGFNVALWYTKYASRLAGKENITEDEAKEVHRSLKIAAGIFKHLKESHIPKLLTPAEKGRDLEARLIDAYIIQCQAEAQEVTIARAIELKHAPGLIAALAYETASFYQKADHTLSSLEPAHSAKWRKYLHLKMCFYTAYAYCYHGQTLLASDKCGEAIRSLQEAEKLYAEAEALCKEYGETKGPGPTAKPSGHLFFRKLGSLVKNTLDKCQRENGFIYFQKIPTEAPQLELKANYGLVEPVPFEFPPMSALWTPEALAAFDLTKRPKDDS
type: DOMAIN
name: BRO1_dom
description: BRO1 domain

phrase: FKWTDTLQGHVPSAQQDAVFELISMGFNVALWYTKYASRLAGKENITEDEAKEVHRSLKIAAGIFKHLKESHIPKLLTPAEKGRDLEARLIDAYIIQCQAEAQEVTIARAIELKHAPGLIAALAYETASFYQKADHTLSSLEPAHSAKWRKYLHLKMCFYTAYAYCYHGQTLLASDKCGEAIRSLQEAEKLYAEAEALCKEYGETKGPGPTAKPSGHLFFRKLGSLVKNTLDKCQRENGFIYFQKIPTEAPQLELKANYGLVEPVPFEFPPMSALWTPEALAAFDLTKRPKDDSIKPKPEEEVKPVKEPDIKPQKDTGCSV
type: DOMAIN
name: BRO1_dom
description: BRO1 domain
Protein sequence:
MDLNEKIINILSSVGLTKNLSIFILDLIPILIILLGATLGVLVIVWLERKISAAVQQRIGPEYAGPLGMIQALADGLKLVLKEDIIPAKGDPWLFSVGPALVVVPVFLSYLVVPFGHELILANLGVGILFWIALSSIAPLGLLMAGYGSNNKYSFLGGLRAAAQAISYEIPLALCVLSVALLSHSLSTVDIVEEQSKYGILGWNIWRQPIGFIAFLIASLAECERLPFDLPEAEEELVAGYQTEYCGIKFGLFYVGSYLNLLVSALFVSVLYLGGWNFSLPWINFPILLTENDFALSLNIVNATLGIAITLGKAYLFLFLSILARWTLPRVRMDQLLDLGWKFLLPVSLGNLLLTASLQLALL

Annotated regions:
phrase: GMIQALADGLKLVLK
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_su1_CS
description: NADH:ubiquinone oxidoreductase, subunit 1, conserved site

phrase: PFDLPEAEEELVA
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_su1_CS
description: NADH:ubiquinone oxidoreductase, subunit 1, conserved site
Protein sequence:
MTEIIQELDLNGEMLVRREKLAALRAKGNAFPNTFRRNALAQDLHTQYDEIESESLKTQGIEVKVAGRIMTRRVMGKATFITLQDMSGKIQLYVARDNLAEGVYTDDVGNWDLGDIVGVKGTLFKTKTNELTIRATEVHLLTKALRPLPNKFHGLSDQETRYRQRYLDLIANEDSRRTFIIRSKVIAGIREYFISKGFMEVETPMLQIIPGGASARPFITHHNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNEGVSIRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLALDILGTTIVPYGDLKFDFGKPFERITMHEAILKYGAEQGIVKEDLYDFDRAVAVAQKLGIEVQKSWGLGSLVNAIFEEVAEHHLIQPTFLMAHPAEISPLARRNDENPDVTDRFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDEAMFKDEDFVTALEHGLPPTAGEGLGIDRLAMLFANANSIRDVILFPAMKTKS

Annotated regions:
phrase: DQETRYRQRYLDLIANEDSRRTFIIRSKVIAGIREYFISKGFMEVETPMLQIIPGGASARPFITHHNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNEGVSIRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLALDILGTTIVPYGDLKFDFGKPFERITMHEAILKYGAEQGIVKEDLYDFDRAVAVAQKLGIEVQKSWGLGSLVNAIFEEVAEHHLIQPTFLMAHPAEISPLARRNDENPDVTDRFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDEAMFKDEDFVTALEHGLPPTAGEGLGIDRLAMLFANANSIRDVILFPA
type: DOMAIN
name: Aa-tRNA-synt_II
description: Aminoacyl-tRNA synthetase, class II (D/K/N)

phrase: EVKVAGRIMTRRVMGKATFITLQDMSGKIQLYVARDNLAEGVYTDDVGNWDLGDIVGVKGTLFKTKTNELTIRATEVHLLTKALRPLPNKFHGLSDQETRYRQRYLD
type: DOMAIN
name: Lys-tRNA-ligase_II_N
description: Lysine-tRNA ligase, class II, N-terminal

phrase: VKVAGRIMTRRVMGKATFITLQDMSGKIQLYVARDNLAEGVYTDDVGNWDLGDIVGVKGTLFKTKTNELTIRATEVHL
type: DOMAIN
name: NA-bd_OB_tRNA
description: OB-fold nucleic acid binding domain, AA-tRNA synthetase-type

phrase: FIIRSKVIAGIREYFISKGFMEVETPMLQIIPGGASARPFITHHNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNEGVSIRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLALDILGTTIVPYGDLKFDFGKPFERITMHEAILKYGAEQGIVKEDLYDFDRAVAVAQKLGIEVQKSWGLGSLVNAIFEEVAEHHLIQPTFLMAHPAEISPLARRNDENPDVTDRFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDEAMFKDEDFVTALEHGLPPTAGEGLGIDRLAMLFANANSIRDVILF
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: NEDSRRTFIIRSKVIAGIREYFISKGFMEVETPMLQIIPGGASARPFITHHNALDVDMYLRIAPELYLKRLVVGGFERVFELNRNFRNEGVSIRHNPEFTMLEYYQAYADYHDLMDNTEELLRKLALDILGTTIVPYGDLKFDFGKPFERITMHEAILKYGAEQGIVKEDLYDFDRAVAVAQKLGIEVQKSWGLGSLVNAIFEEVAEHHLIQPTFLMAHPAEISPLARRNDENPDVTDRFELFIGGREIGNGFSELNDAEDQNERFDAQVAAKEAGDDEAMFKDEDFVTALEHGLPPTAGEGLGIDRLAMLFANANSIRDVILFPAM
type: DOMAIN
name: Lys-tRNA-synth_II_C
description: Lysyl-tRNA synthetase, class II, C-terminal

phrase: ISKGFMEVET
type: DOMAIN
name: Lys-tRNA-synth_II_C
description: Lysyl-tRNA synthetase, class II, C-terminal

phrase: PGGASARPFITHHNAL
type: DOMAIN
name: Lys-tRNA-synth_II_C
description: Lysyl-tRNA synthetase, class II, C-terminal

phrase: LKRLVVGGFERVF
type: DOMAIN
name: Lys-tRNA-synth_II_C
description: Lysyl-tRNA synthetase, class II, C-terminal

phrase: FRNEGVSIRHNPEFTML
type: DOMAIN
name: Lys-tRNA-synth_II_C
description: Lysyl-tRNA synthetase, class II, C-terminal

phrase: QPTFLMAHPAEISPLA
type: DOMAIN
name: Lys-tRNA-synth_II_C
description: Lysyl-tRNA synthetase, class II, C-terminal
Protein sequence:
MTPAKAPSHAKKPEAGSQPISSMWTQMFPPKPTYTEEHMPDLSGKIYIVTGASSGVGKETSRMLYSKNAKVYMAMRSGAKAAAAMADIQRAVPKSSGALVILPLDLADLSAVKKAAEEFVSLESSLHGLINNAGVQVLDDTNGEARTAQGHEIHIGVNVLGPFLFTQLLRGVLAATAGRAQPDTVRIVWVSSMGTETIGEKGRGLSADYVDYWPLMSPLERYGLSKAGNWLQGAECAKRYAGDGILSFPINPGHLKSELYREGGTLFKLALRPVLFPPAYGSYVELFAALSPTLSTKDSGAWIVPWGRLYPIRSDLLDATKSAAEGGNGHASAFWDWCEEQVKAFL

Annotated regions:
Protein sequence:
MTSILTNVAAMAALQTLRGIDSNMEETQARVSSGLRVGTASDNAAYWSIATTMRSDNMALSAVQDALGLGAAKVDTAYAGMENAVEVVKEIRAKLVAATEDGVDKAKIQEEIEQLKQQLTSIATAASFSGENWLQADITTPVTKSVVGSFVRDSSGVVSVKTIDYVLDGNSVLFDTVGDAGILDKIYNVSQASVTLPVNVNGTTTEYTVAAYAVDELIAAGATFDGDSANVTGYTVPAGGIDYNGNFVKVEGTWVRAIDVAATGQEVVYDDGTTKWGVDTTVAGAPAINVVAPASIENIDITNAAQAANLDALIRGVDEALEDLISATSALGSISMRIGMQEEFVSKLTDSIDSGIGRLVDADMNEESTRLKALQTQQQLAIQSLSIANTNSENILQLFRQ

Annotated regions:
phrase: RGVDEALEDLISATSALGSISMRIGMQEEFVSKLTDSIDSGIGRLVDADMNEESTRLKALQTQQQLAIQSLSIANTNSENILQL
type: DOMAIN
name: Flagellin_C
description: Flagellin, C-terminal domain

phrase: RVGTASDNAAYWSIATT
type: DOMAIN
name: Flagellin_N
description: Flagellin, N-terminal domain

phrase: DTAYAGMENAVEVVKEIRA
type: DOMAIN
name: Flagellin_N
description: Flagellin, N-terminal domain

phrase: KIQEEIEQLKQQLTSIATAASFS
type: DOMAIN
name: Flagellin_N
description: Flagellin, N-terminal domain

phrase: ILTNVAAMAALQTLRGIDSNMEETQARVSSGLRVGTASDNAAYWSIATTMRSDNMALSAVQDALGLGAAKVDTAYAGMENAVEVVKEIRAKLVAATEDGVDKAKIQEEIEQLKQQLTSIATAASFSGENWLQ
type: DOMAIN
name: Flagellin_N
description: Flagellin, N-terminal domain
Protein sequence:
MAAPSVPTPLYGHVGRGAFRDVYEPAEDTFLLLDALEAAAAELAGVEICLEVGAGSGVVSAFLASMIGPRALYMCTDINPEAAACTLETARCNRVHVQPVITDLVHGLLPRLKGKVDLLVFNPPYVVTPPEEVGSRGIEAAWAGGRNGREVMDRFFPLAPELLSPRGLFYLVTVKENNPEEIFKTMKTRGLQGTTALCRQAGQEALSVLRFSKS

Annotated regions:
phrase: LVFNPP
type: CONSERVED_SITE
name: DNA_methylase_N6_adenine_CS
description: DNA methylase, N-6 adenine-specific, conserved site

phrase: LLLDALEAAAAELAGVEICLEVGAGSGVVSAFLASMIGPRALYMCTDINPEAAACTLETARCNRVHVQPVITDLVHGLLPRLKGKVDLLVFNPPYVV
type: DOMAIN
name: Small_mtfrase_dom
description: Methyltransferase small domain
Protein sequence:
MSELYDITIVGGGPVGLFAAFYAHLRQAKVKIIDSLPQLGGQPAILYPEKKILDVPGFTNLSGEELTQRLIEQLETFQTEICLNETVLDIVKSDDGFTITTSQAQHQTKTIIIAMGGGAFKPRALELDAAESYSNLHYHVSNISQYAGKKVVVLGGGDSAVDWALAFEKIAETSLVHRRDNFRALEHSVEELKASSVEIKTPFVPSRLVGENGKITHLEISQVKGEESQLLPLDHLFVNYGFKSSVGNLKDWGLELNRHKILVNSKQETSVPGIYAAGDCCSYEGKIDLIATGLGEAPTAVNNAINHIYPDQKVQPKHSTSL

Annotated regions:
phrase: YDITIVGGGPVGLFAAFYAHLRQAKVKIIDSLPQLGGQPAILYPEKKILDVPGFTNLSGEELTQRLIEQLETFQTEICLNETVLDIVKSDDGFTITTSQAQHQTKTIIIAMGGGAFKPRALELDAAESYSNLHYHVSNISQYAGKKVVVLGGGDSAVDWALAFEKIAETSLVHRRDNFRALEHSVEELKASSVEIKTPFVPSRLVGENGKITHLEISQVKGEESQLLPLDHLFVNYGFKSSVGNLKDWGLELNRHKILVNSKQETSVPGIYAAGDCCSYEGKIDLIATGLGE
type: DOMAIN
name: FAD/NAD-binding_dom
description: FAD/NAD(P)-binding domain
Protein sequence:
MDTAPNLVLVGPMGAGKSTVGRRLAALLGFPFSDLDDDIEIAAGRSIAAIFAEDGEDAFRALESARLRERLDGVGRVLATGGGVVLDPGNRELLESRACVVWLGAQVDSQLARVDGSSHRPLLRDGDPESVLRTLAATRTPLYRKVADLRLETDELTEDQVVEILEEMVRYRWKEAGGRRGAHVIEVGGEHPYLIHIGPGLLDDGNALAAQVRGRHALVASDGNVAPLYAERTLAALTTSGRLQARVSIVAPGEKSKSLDEFADLLTDLAELGATRDACVFALGGGVVGDLAGFAAACWMRGIDLVQLPTSLLAMVDSSVGGKTAIDVPQGKNLVGAFYPPRAVFADTSTLATLPDRELRAGLSEVVKYGAIRDARFLEWLAANAGLLLARDAEVLAEAIARSCAHKVAIVERDPHERGERALLNFGHTFAHAIEAEQGYGRAAALNHGEAVAVGMVLAARLSALRGMASEADARRLASLLDAFGLPTRLPHGLDPKLLLSRMRLDKKALASGLRLVLWEGPGRAKIVSGVPDAAVLEVLAAPA

Annotated regions:
phrase: RALESARLRERLDGVGRVLATGGGV
type: CONSERVED_SITE
name: Shikimate_kinase_CS
description: Shikimate kinase, conserved site

phrase: IVAPGEKSKSLDEFADLLTDLAELGATRDACVFALGGGVVGDLAGFAAACWMRGIDLVQLPTSLLAMVDSSVGGKTAIDVPQGKNLVGAFYPPRAVFADTSTLATLPDREL
type: DOMAIN
name: DHQS/DOIS_N
description: 3-dehydroquinate synthase, N-terminal domain

phrase: GLSEVVKYGAIRDARFLEWLAANAGLLLARDAEVLAEAIARSCAHKVAIVERDPHERGERALLNFGHTFAHAIEAEQGYGRAAALNHGEAVAVGMVLAARLSALRGMASEADARRLASLLDAFGLPTRLPHGLDPKLLLSRMRLDKK
type: DOMAIN
name: DHQS_C
description: 3-dehydroquinate synthase, C-terminal domain