nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MHDIAAIRKDPAAYDKNWARRGVSPQTPEILKLDAERRAVQTEMQDLQNQRNTKSKEIGVIKGKGGDAAALMNEVAAMKDRMAELEQTEAALAEKLNTILASLPNLLDADTPDGKDENDNKEVRKVGTPKRLNSQTPEHFEIGEALGMMDFETAAKMSGSRFTLMHSGLARMERALAQFMLDTHTQEHGYTEVSPPLLVRDNALYGTGQLPKFAEDLFHTTSDHWLIPTAEVSLTNIVADCIVEDDYLPRRYTAWTPCFRSEAGAAGKDTRGMIRQHQFYKVELVSVTLPEQSNDEHERMTGCAENILKKLELPFRTISLCSGDIGFGSRKTYDIEVWLPGQDRYREISSCSNCGDFQARRMKARFRRKGEKDTQFLHTLNGSGVAVGRALIAVMENYYDPDDGGVFVPAALKPYMGGIEKLIPADTATQAQKRAI

Annotated regions:
phrase: RMERALAQFMLDTHTQEHGYTEVSPPLLVRDNALYGTGQLPKFAEDLFHTTSDHWLIPTAEVSLTNIVADCIVEDDYLPRRYTAWTPCFRSEAGAAGKDTRGMIRQHQFYKVELVSVTLPEQSNDEHERMTGCAENILKKLELPFRTISLCSGDIGFGSRKTYDIEVWLPGQDRYREISSCSNCGDFQARRMKARFRRKGEKDTQFLHTLNGSGVAVGRALIAVMENYYDPDDGGVFV
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: DNKEVRKVGTPKRLNSQTPEHFEIGEALGMMDFETAAKMSGSRFTLMHSGLARMERALAQFMLDTHTQEHGYTEVSPPLLVRDNALYGTGQLPKFAEDLFHTTSDHWLIPTAEVSLTNIVADCIVEDDYLPRRYTAWTPCFRSEAGAAGKDTRGMIRQHQFYKVELVSVTLPEQSNDEHERMTGCAENILKKLELPFRTISLCSGDIGFGSRKTYDIEVWLPGQDRYREISSCSNCGDFQARRMKARFRRKGEKDTQFLHTLNGSGVAVGRALIAVMENYYDPDDGGVFVPAALKPY
type: DOMAIN
name: SerRS_core
description: Serine-tRNA ligase catalytic core domain

phrase: MHDIAAIRKDPAAYDKNWARRGVSPQTPEILKLDAERRAVQTEMQDLQNQRNTKSKEIGVIKGKGGDAAALMNEVAAMKDRMAELEQTEAALAEKLNTILASLPN
type: DOMAIN
name: Ser-tRNA-synth_1_N
description: Serine-tRNA synthetase, type1, N-terminal

phrase: DHWLIPTAEVSLTNIVADCIVEDDYLPRRYTAWTPCFRSEAGAAGKDTRGMIRQHQFYKVELVSVTLPEQSNDEHERMTGCAENILKKLELPFRTISLCSGDIGFGSRKTYDIEVWLPGQDRYREISSCSNCGDFQARRMKARFRRKGEKDTQFLHTLNGSGVAVGRALIAVMEN
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
Protein sequence:
MSIDCLYRRSSLFDTSFVPLHSSIPATSKMSASNSDVNAPISPVVDEGKSELVSPTLERLVAPFNCSPSSTPLQDVAGVGSKMSDTLWMGDLEPWMDATFIQQLWASLNEPVNVKVMRSKASSSETLISYCFVQFSSSAAAERALMKYNNTMIPGAHCTFKLNWATGGGIQHNNFVSRDPEFSIFVGDLLPTTEDSDLFMTFRSIYPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALMHMQGYLCQGRPLRISVASPKSRASIAADSALGIVPTSTSNRQPNQDLCSMDPLNTTVFVGGLASNLSEKDLQVCFQPFGRILNIKIPFGKGCGFVQYSEKSAAEKAINTMQGALVGTSHIRLAWGHNTLPVSALSQSQSQVSDEGFDRTLSANQIFGMNQSVIGANSGSSNSSGSSLKSAPVSPRTAAAQSLLPNSVVSSINGMNSVNFSTISPPPLSRSASISPTLSGSGSGLTPLSSHFPSAATGLVGGQVYPQSSVLQSSKINGSAKVQPSVKLPEWLQPFSGNNHNSFATQDLLTRVSSLKLVDDEQPASLNGSAFQARASRPWNLGRERQSSLIDLRHELEQNENGLEKSGFGLNLRGRLPPRSYSTFNCTGQYLQPSLRLSRDS

Annotated regions:
phrase: VFVGGLASNLSEKDLQVCFQPFGRILNIKIPFGKGCGFVQYSEKSAAEKAINTMQGALVGTS
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: IFVGDLLPTTEDSDLFMTFRSIYPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALMHMQGYLCQGRPL
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: TTVFVGGLASNLSEKDLQVCFQPFGRILNIKIPFGKGCGFVQYSEKSAAEKAINTMQGALVGTSHIRLAWGH
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: FSIFVGDLLPTTEDSDLFMTFRSIYPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALMHMQGYLCQGRPLRISVAS
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: SIFVGDLLPTTEDSDLFMTFRSIYPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALMHMQGYLCQGRPLRI
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: TVFVGGLASNLSEKDLQVCFQPFGRILNIKIPFGKGCGFVQYSEKSAAEKAINTMQGALVGTSHIRL
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: TLWMGDLEPWMDATFIQQLWASLNEPVNVKVMRSKASSSETLISYCFVQFSSSAAAERALMKYNNTMIPGAHCTF
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: DTLWMGDLEPWMDATFIQQLWASLNEPVNVKVMRSKASSSETLISYCFVQFSSSAAAERALMKYNNTMIPGAHCTFKLNWAT
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain
Protein sequence:
MQRLRWLRDWKSSGRGLTAAKEPGARSSPLQAMRILQLILLALATGLVGGETRIIKGFECKPHSQPWQAALFEKTRLLCGATLIAPRWLLTAAHCLKPRYIVHLGQHNLQKEEGCEQTRTATESFPHPGFNNSLPNKDHRNDIMLVKMASPVSITWAVRPLTLSSRCVTAGTSCLISGWGSTSSPQLRLPHTLRCANITIIEHQKCENAYPGNITDTMVCASVQEGGKDSCQGDSGGPLVCNQSLQGIISWGQDPCAITRKPGVYTKVCKYVDWIQETMKNN

Annotated regions:
phrase: LVGGETRIIKGFECKPHSQPWQAALFEKTRLLCGATLIAPRWLLTAAHCLKPRYIVHLGQHNLQKEEGCEQTRTATESFPHPGFNNSLPNKDHRNDIMLVKMASPVSITWAVRPLTLSSRCVTAGTSCLISGWGSTSSPQLRLPHTLRCANITIIEHQKCENAYPGNITDTMVCASVQEGGKDSCQGDSGGPLVCNQSLQGIISWGQDPCAITRKPGVYTKVCKYVDWIQETM
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain

phrase: IIKGFECKPHSQPWQAALFEKTRLLCGATLIAPRWLLTAAHCLKPRYIVHLGQHNLQKEEGCEQTRTATESFPHPGFNNSLPNKDHRNDIMLVKMASPVSITWAVRPLTLSSRCVTAGTSCLISGWGSTSSPQLRLPHTLRCANITIIEHQKCENAYPGNITDTMVCASVQEGGKDSCQGDSGGPLVCNQSLQGIISWGQDPCAITRKPGVYTKVCKYVDW
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain

phrase: IIKGFECKPHSQPWQAALFEKTRLLCGATLIAPRWLLTAAHCLKPRYIVHLGQHNLQKEEGCEQTRTATESFPHPGFNNSLPNKDHRNDIMLVKMASPVSITWAVRPLTLSSRCVTAGTSCLISGWGSTSSPQLRLPHTLRCANITIIEHQKCENAYPGNITDTMVCASVQEGGKDSCQGDSGGPLVCNQSLQGIISWGQDPCAITRKPGVYTKVCKYVDWIQE
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain

phrase: RIIKGFECKPHSQPWQAALFEKTRLLCGATLIAPRWLLTAAHCLKPRYIVHLGQHNLQKEEGCEQTRTATESFPHPGFNNSLPNKDHRNDIMLVKMASPVSITWAVRPLTLSSRCVTAGTSCLISGWGSTSSPQLRLPHTLRCANITIIEHQKCENAYPGNITDTMVCASVQEGGKDSCQGDSGGPLVCNQSLQGIISWGQDPCAITRKPGVYTKVCKYVDW
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain

phrase: LTAAH
type: ACTIVE_SITE
name: TRYPSIN_HIS
description: Serine proteases, trypsin family, histidine active site

phrase: DSCQGDSGGPL
type: ACTIVE_SITE
name: TRYPSIN_SER
description: Serine proteases, trypsin family, serine active site
Protein sequence:
MDLPEPLHDFLLVFLGSGLILGSLGVVLFTNPIFSAFSLGLVLVCISLFYILSNSHFVAASQLLIYVGAINVLIIFAVMFMNGSEYYQDFRLWTVGDGITLMVCTSIFVSLITTILDTSWHGIIWTTRPNQIIEQDLISTSQQIGIHLSTDFFLPFELISIILLVALIGAIVVARQ

Annotated regions:
Protein sequence:
MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSRYRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTYRMLYIRAKGGQFKSKHQLYMFLEEHNLLKKR

Annotated regions:
phrase: LKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSRYRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTYRMLYIRAKGGQFKSKHQLYMFLEE
type: DOMAIN
name: Ribosomal_eL19_dom
description: Large ribosomal subunit protein eL19 domain

phrase: TLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSRYRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTYRMLYIRAKGGQFKSKHQLYMFLEEHNLL
type: DOMAIN
name: Ribosomal_eL19_dom
description: Large ribosomal subunit protein eL19 domain

phrase: TLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSRYRARIRHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTYRMLYIRAKGGQFKSKHQLYMFLEEH
type: DOMAIN
name: Ribosomal_eL19_dom
description: Large ribosomal subunit protein eL19 domain

phrase: QRRVAAELLKCGENRIWID
type: CONSERVED_SITE
name: Ribosomal_eL19_CS
description: Large ribosomal subunit protein eL19, conserved site
Protein sequence:
MTNIRKTHPLTKIINNSFIDLPAPSNISAWWNFGSLLGICLILQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWIIRYMHANGASMFFVCLFLHVGRGLYYGSYMFPETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFVISALAAVHLLFLHETGSNNPSGIPSDSDKIPFHPYYTIKDILGALFLILTLTLLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILVLAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFITIGQLASILYFMILLVFMPIVSIIENNLLKW

Annotated regions:
phrase: PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILVLAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFITIGQLASILY
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: PLTKIINNSFIDLPAPSNISAWWNFGSLLGICLILQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWIIRYMHANGASMFFVCLFLHVGRGLYYGSYMFPETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFVISALAAVHLLFLHETGS
type: DOMAIN
name: Cytochrome_b_N_euk/bac
description: Cytochrome b/b6, N-terminal domain, eukaryotic/bacterial

phrase: NPSGIPSDSDKIPFHPYYTIKDILGALFLILTLTLLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILVLAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFITIGQL
type: DOMAIN
name: Cytochrome_b_C_euk/bac
description: Cytochrome b/b6, C-terminal domain, eukaryotic/bacterial

phrase: GIPSDSDKIPFHPYYTIKDILGALFLILTLTLLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVFSILVLAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFITIGQLASILYFMILLVFMPIVSIIENNLLK
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: IDLPAPSNISAWWNFGSLLGICLILQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWIIRYMHANGASMFFVCLFLHVGRGLYYGSYMFPETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFVISALAAVHLLFLHET
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: MTNIRKTHPLTKIINNSFIDLPAPSNISAWWNFGSLLGICLILQILTGLFLAMHYTSDTATAFSSVTHICRDVNYGWIIRYMHANGASMFFVCLFLHVGRGLYYGSYMFPETWNIGIILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFVISALAAVHLLFLHETGSNNP
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain
Protein sequence:
MNYETLASEIRDGVGGQENIISVIHCATRLRFKLRDNTNANADALKNNPGIIMVVESGGQFQVVVGNQVADVYQALLSLDGMARFSDSAAPEEEKKNSLFSGFIDIISSIFTPFVGVMAATGILKGFLALGVATHVISESSGTYKLLFAASDALFYFFPIVLGYTAGKKFGGNPFTTLVIGATLVHPSMIAAFNAMQAPDHSTLHFLGIPITFINYSSSVIPILFASWVSCKLEKPLNRWLHANIRNFFTPLLCIVISVPLTFLLIGPSATWLSQMLAGGYQWLYGLNSLLAGAVMGALWQVCVIFGLHWGFVPLMLNNFSVIGHDTLLPLLVPAVLGQAGATLGVLLRTQDLKRKGIAGSAFSAAIFGITEPAVYGVTLPLRRPFIFGCIGGALGAAVMGYAHTTMYSFGFPSIFSFTQVIPPTGVDSSVWAAVIGTLLAFAFAALTSWSFGVPKDETQPAAADSPAVLAETQANAGAVRDETLFSPLAGEVLLLEQVADRTFASGVMGKGIAIRPTQGRLYAPVDGTVASLFKTHHAIGLASRGGAEVLIHVGIDTVRLDGRYFTPHVRVGDVVRQGDLLLEFDGPAIEAAGYDLTTPIVITNSEDYRGVEPVASGKVDANAPLTQLVC

Annotated regions:
phrase: ETLASEIRDGVGGQENIISVIHCATRLRFKLRDNTNANADALKNNPGIIMVVESGGQFQVVVGNQVADVYQALLSLDGMARF
type: DOMAIN
name: PTS_IIB_1
description: Phosphotransferase system, IIB component, type 1

phrase: EIRDGVGGQENIISVIHCATRLRFKLRDNTNA
type: CONSERVED_SITE
name: PTrfase_EIIB_Cys
description: Phosphotransferase system EIIB, cysteine phosphorylation site

phrase: DRTFASGVMGKGIAIRPTQGRLYAPVDGTVASLFKTHHAIGLASRGGAEVLIHVGIDTVRLDGRYFTPHVRVGDVVRQGDLLLEFDGPAIEAAGYDLTTPIVIT
type: DOMAIN
name: PTS_EIIA_1_perm
description: Phosphotransferase system, sugar-specific permease EIIA type 1

phrase: LFSPLAGEVLLLEQVADRTFASGVMGKGIAIRPTQGRLYAPVDGTVASLFKTHHAIGLASRGGAEVLIHVGIDTVRLDGRYFTPHVRVGDVVRQGDLLLEFDGPAIEAAGYDLTTPIVIT
type: DOMAIN
name: PTS_EIIA_1_perm
description: Phosphotransferase system, sugar-specific permease EIIA type 1

phrase: GAEVLIHVGIDT
type: DOMAIN
name: PTS_EIIA_1_perm
description: Phosphotransferase system, sugar-specific permease EIIA type 1

phrase: NIISVIHCATRLRFKLR
type: CONSERVED_SITE
name: PTrfase_EIIB_Cys
description: Phosphotransferase system EIIB, cysteine phosphorylation site

phrase: SIFTPFVGVMAATGILKGFLALGVATHVISESSGTYKLLFAASDALFYFFPIVLGYTAGKKFGGNPFTTLVIGATLVHPSMIAAFNAMQAPDHSTLHFLGIPITFINYSSSVIPILFASWVSCKLEKPLNRWLHANIRNFFTPLLCIVISVPLTFLLIGPSATWLSQMLAGGYQWLYGLNSLLAGAVMGALWQVCVIFGLHWGFVPLMLNNFSVIGHDTLLPLLVPAVLGQAGATLGVLLRTQDLKRKGIAGSAFSAAIFGITEPAVYGVTLPLRRPFIFGCIG
type: DOMAIN
name: PTS_EIIC
description: Phosphotransferase system, EIIC

phrase: ETLASEIRDGVGGQENIISVIHCATRLRFKLRDNTNANADALKNNPGIIMVVESGGQFQVVVGNQVADVYQALLSLD
type: CONSERVED_SITE
name: PTrfase_EIIB_Cys
description: Phosphotransferase system EIIB, cysteine phosphorylation site

phrase: DIISSIFTPFVGVMAATGILKGFLALGVATHVISESSGTYKLLFAASDALFYFFPIVLGYTAGKKFGGNPFTTLVIGATLVHPSMIAAFNAMQAPDHSTLHFLGIPITFINYSSSVIPILFASWVSCKLEKPLNRWLHANIRNFFTPLLCIVISVPLTFLLIGPSATWLSQMLAGGYQWLYGLNSLLAGAVMGALWQVCVIFGLHWGFVPLMLNNFSVIGHDTLLPLLVPAVLGQAGATLGVLLRTQDLKRKGIAGSAFSAAIFGITEPAVYGVTLPLRRPFIFGCIGGALGAAVMGYAHTTMYSFGFPSIFSFTQVIPPTGVDSSVWAAVIGTLLAFAFAALTSWSFGVPKDETQPAAAD
type: DOMAIN
name: PTS_EIIC_1
description: Phosphotransferase system, EIIC component, type 1

phrase: TLFSPLAGEVLLLEQVADRTFASGVMGKGIAIRPTQGRLYAPVDGTVASLFKTHHAIGLASRGGAEVLIHVGIDTVRLDGRYFTPHVRVGDVVRQGDLLLEFDGPAIEAAGYDLTTPIVITNSED
type: DOMAIN
name: PTS_EIIA_1_perm
description: Phosphotransferase system, sugar-specific permease EIIA type 1
Protein sequence:
MHALQAKILDPRIGNEFPLPQYATPGSAGLDLRAMLKEDTLLEPGQTLLIPTGLSVYIGDPGLAALILPRSGLGHKHGIVLGNLVGLIDSDYQGELMVSCWNRGQTAFNIAVGERIAQLVLVPVVQAHFEVVEAFDESQRGAGGFGHSGSH

Annotated regions:
phrase: EFPLPQYATPGSAGLDLRAMLKEDTLLEPGQTLLIPTGLSVYIGDPGLAALILPRSGLGHKHGIVLGNLVGLIDSDYQGELMVSCWNRGQTAFNIAVGERIAQLVLVPVVQAHFEVVEAFDESQRGAGGFGHS
type: DOMAIN
name: dUTPase-like
description: dUTPase-like

phrase: AGLDLRAMLKEDTLLEPGQTLLIPTGLSVYIGDPGLAALILPRSGLGHKHGIVLGNLVGLIDSDYQGELMVSCWNRGQTAFNIAVGERIAQLV
type: DOMAIN
name: dUTPase_trimeric
description: dUTPase, trimeric
Protein sequence:
MSTPTLPNLSQLHGIQNQSLQQQQQQQPQQQQQPQQQQQQQQPQQTMQQPIQNLHQQAPQMQQPQYNLHTTLPPPLMNPNGLGLMGHNMMGGGNNGNNSGNNNGQPQMHGTNLNGLSLAIQNQSSLPQPINNNNNNNNNNSNINNNNNNSNNNNNNNNSNLGINSSPTQSSANSADKRSRGRPRKNPPSEPKDTSGPKRKRGRPPKMDEEGNPQPKPVPQPGSNKKRGRPKKPKDENESDYNNTSFSDSNTDGTPKKRGRPPKAKGDSPSASPTHNTLGNGILNSNNNNNNNNNNSNINNINNNNNNNSNNNNNSSNNNNNNNNSTNNNTNNNNNNTNNNTNNNNNNINNNNNNTNNNNNNANNQNTNNNNMGNNSNNNNNPNNNNHQNNNNNNTSNNSNTTTATTTAPGGNNLTNSLNNAGNLGNLGRVSGLHSSDPNNPNAQKSFPDSTNTMDFQPNFSFFH

Annotated regions:
phrase: KRKRGRPPK
type: CONSERVED_SITE
name: AT_hook_DNA-bd_motif
description: AT hook, DNA-binding motif

phrase: KRSRGRPRKNP
type: CONSERVED_SITE
name: AT_hook_DNA-bd_motif
description: AT hook, DNA-binding motif

phrase: PKKRGRPPKAK
type: CONSERVED_SITE
name: AT_hook_DNA-bd_motif
description: AT hook, DNA-binding motif

phrase: KKRGRPK
type: CONSERVED_SITE
name: AT_hook_DNA-bd_motif
description: AT hook, DNA-binding motif

phrase: NKKRGRPKKPKD
type: CONSERVED_SITE
name: AT_hook_DNA-bd_motif
description: AT hook, DNA-binding motif

phrase: KRSRGRPRKNPP
type: CONSERVED_SITE
name: AT_hook_DNA-bd_motif
description: AT hook, DNA-binding motif

phrase: KRKRGRPPKMDE
type: CONSERVED_SITE
name: AT_hook_DNA-bd_motif
description: AT hook, DNA-binding motif

phrase: PKKRGRPPKAKG
type: CONSERVED_SITE
name: AT_hook_DNA-bd_motif
description: AT hook, DNA-binding motif

phrase: KRSRGRPRKN
type: CONSERVED_SITE
name: AT_hook_DNA-bd_motif
description: AT hook, DNA-binding motif

phrase: GPKRKRGRPPK
type: CONSERVED_SITE
name: AT_hook_DNA-bd_motif
description: AT hook, DNA-binding motif

phrase: GSNKKRGRPK
type: CONSERVED_SITE
name: AT_hook_DNA-bd_motif
description: AT hook, DNA-binding motif
Protein sequence:
MAESKNNKKRCSFCGRSENEVGFLITGMNGYICDSCATQAYEITQEAMGAGKQSAGATRLNLKELPKPVEIKNFLDQYVIGQDDAKRFLAVSVYNHYKRLLQKDSGDDVEIEKSNIIMVGSTGTGKTLLARTIAKLLHVPFTIVDATVLTEAGYVGEDIESILTRLLQVADYNVPEAEQGIVFIDEIDKIARKGDNPSITRDVSGEGVQQGLLKLLEGSVVNVPPQGGRKHPDQKMIPVNTKNILFICGGAFDGIEKKIAQRLNTHVVGYNASRKTATIDKNNMMQYIAPQDLKSFGLIPEIIGRLPVLTYLNPLDRNALRAILTEPKNSIIKQYIKLFEMDGVKLTFQPEVYEYIVDKAVEYKLGARGLRSIVETIMMDVMFEIPSEDQKEYEVTLDYAKHQLEKANLARLQTA

Annotated regions:
phrase: EKSNIIMVGSTGTGKTLLARTIAKLLHVPFTIVDATVLTEAGYVGEDIESILTRLLQVADYNVPEAEQGIVFIDEIDKIARKGDNPSITRDVSGEGVQQGLLKLLEGSVVNVPPQGGRKHPDQKMIPVNTKNILFICGGAFDGIEKKIAQRLNTHVVGYNA
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: KKRCSFCGRSENEVGFLITGMNGYICDSCATQAYEITQE
type: DOMAIN
name: Znf_CppX_C4
description: Zinc finger, ClpX C4-type

phrase: LDRNALRAILTEPKNSIIKQYIKLFEMDGVKLTFQPEVYEYIVDKAVEYKLGARGLRSIVETIMMDVMFEIPSED
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal

phrase: MAESKNNKKRCSFCGRSENEVGFLITGMNGYICDSCATQAYEITQEAMGAG
type: DOMAIN
name: Znf_CppX_C4
description: Zinc finger, ClpX C4-type

phrase: LDRNALRAILTEPKNSIIKQYIKLFEMDGVKLTFQPEVYEYIVDKAVEYKLGARGLRSIVETIMMDVMFEIPSEDQKEYEVTLDYAKHQ
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal

phrase: KRCSFCGRSENEVGFLITGMNGYICDSCATQAYEITQ
type: DOMAIN
name: Znf_CppX_C4
description: Zinc finger, ClpX C4-type

phrase: KSNIIMVGSTGTGKTLLARTIAKLLHVPFTIVDATVLTEAGYVGEDIESILTRLLQVADYNVPEAEQGIVFIDEIDKIARKGDNPSITRDVSGEGVQQGLLKLLEGSVVNVPPQGGRKHPDQKMIPVNTKNILFICGGAFDGIEKKIAQRLNTHVVGYNASRKTATIDKNNMMQYIAPQDLKSFGLIPEIIGRLP
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core
Protein sequence:
METKYLDLLAQKYDCEEKVVTEIINLKAILNLPKGTEHFVSDLHGEYQAFQHVLRNGSGRVKEKIRDIFSGVIYDREIDELAALVYYPEDKLKLIKHDFDTKEALNEWYKETIHRMIKLVSYCSSKYTRSKLRKALPAQFAYISEELLYKTEQAANKEQYYSEIIEQIIALGQADKLITGLAYSTQRLVVDHLHVVGDIYDRGPQPDKIMEELINYHSVDIQWGNHDVLWIGAYSGSKVCLANIIRICARYDNLDIIEDVYGINLRPLLNLAEKYYDDNPSFRPKADENRPEDEIKQITKIHQAIAMIQFKLESPIIKRRPNFNMEERLLLEKIDYDRNEITLNGKTYQLENTCFATVNPKQPDELLEEEAEVMDKLLFSVQNSEKLGRHMNFMMKKGSLYLKYNGNLLIHGCIPVDENGSMETMMIEDKAYAGRELLDVFERFLREAFAHPEETDDLATDMTWYLWTGEYSSLFGKRAMTTFERYFIKEKETHKEKKNPYYYLREDEAACRNILMEFGLNPDHGHIINGHTPVKEIEGEDPIKANGKMIVIDGGFSKAYQSTTGIAGYTLLYNSYGMQLVAHKHFNSKAEVLSTGTDVLTVKRLVDKELERKKVKETNVGEELMKEVAILEKLREYRYMK

Annotated regions:
Protein sequence:
MDKSIGVIDSGVGGLTVVHELMRQLPKEQLIYLGDTARCPYGPRSKEEVRQFTWEMVDFLLTKNIKMLVVACNTATAFTLKDLKEQLDIPVIGVIQPGARAAIKSTTNNQVGVIGTEGTISSGAYSQALEKIKSDIQVSGLACPPFVPMVERGVLSGPEAKAVVSEALRPFSNNKEMDTLILGCTHYPLLKSTIQEVMGEEVTVISSSEETARETSTLLDVHQIMNRSDLVPLHQFYTTGDLEIFIEIAKTIFQESHFQMLTIKQANISTNKVW

Annotated regions:
phrase: VVACNTAT
type: ACTIVE_SITE
name: Asp/Glu_racemase_AS_1
description: Asp/Glu racemase, active site 1

phrase: LILGCTHYPL
type: ACTIVE_SITE
name: Asp/Glu_racemase_AS_2
description: Asp/Glu racemase, active site 2
Protein sequence:
MVFERTLIDLIKGIRSHANDEEAFIATCLLECRKEATSQDADLKSEAILKLAYLEMLGVDISWASFQIVEVMSSSKILQKQKGYLAAVQSFKPDTDVLMLTTNLLKKDLMSSKVPEITLAIDGLSHFSTLGLARDLYRDVLILLNHSVPYVRKRTILLLYRLCLQYPEAISACIPKLRERLDDPDTSVVNAAVSVICELARRAPKNYLEFAPDLFHLLTTSSNNWMLIKLIKLFASLTPYEPRLVKKLIPSLTDIIENTHAMSLLYECINTIVSGNMLVGHSQCDKLASLCASKLRGFFEDTDQNLKYIALLCLRKLANTHPSLVSAQLDIILKCLVDTDTSIRLRALDLVNEIVNKENIRTIVKTLMLQLIVSSDESAVEDIRNSTATRIIEMTSKSTYMNIADFEWLLTVYVDLANIPGIDTGTLLNNQIIDLCVRVKALRPFSVDIFSQAILDPSYVSTTDCSVSEKRTDILPAIIWCLGEYAEFIEEYLDILDALTRPSFKKCSNLAHRLLLQAITKIFCQWCLEEEPTWGVEKFGLVKLWVEKIVSFIEQFLNFQDMEIQRRASEFYILFNQVSDIVNTSDTMEVLELQKKPPYIVQNTMYKLFFGEPLNPVAVKAQRKVMPDENLDLNCPINGVIEVPKELLENIIQSDDSLINFDTEVPSSGIDTFSKKQFNSLESVPVQRDLSSPFYLSSNQHTTTTNSEPENLNVETSMSDEAFNADKVTKVTKNKRRRKIFTSPSLQAMVVAQDEVPEGISLADIENKENPSNSNVYSLISLDPPLSTNQGSMGDIVLETKSPIRVEKKKSKKKKKKKEKTSGKE

Annotated regions:
phrase: EAFIATCLLECRKEATSQDADLKSEAILKLAYLEMLGVDISWASFQIVEVMSSSKILQKQKGYLAAVQSFKPDTDVLMLTTNLLKKDLMSSKVPEITLAIDGLSHFSTLGLARDLYRDVLILLNHSVPYVRKRTILLLYRLCLQYPEAISACIPKLRERLDDPDTSVVNAAVSVICELARRAPKNYLEFAPDLFHLLTTSSNNWMLIKLIKLFASLTPYEPRLVKKLIPSLTDIIENTHAMSLLYECINTIVSGNMLVGHSQCDKLASLCASKLRGFFEDTDQNLKYIALLCLRKLANTHPSLVSAQLDIILKCLVDTDTSIRLRALDLVNEIVNKENIRTIVKTLMLQLIVSSDESAVEDIRNSTATRIIEMTSKSTYMNIADFEWLLTVYVDLANIPGIDTGTLLNNQIIDLCVRVKALRPFSVDIFSQAILDPSYVSTTDCSVSEKRTDILPAIIWCLGEYAEFIEEYLDILDALTRPSFKKCSNLAHRLLLQAITKIFCQWCLEEEPTWGVEKFGLVKLWVEKIVSFIEQFLNFQDMEIQRRASEFYILFN
type: DOMAIN
name: Clathrin/coatomer_adapt-like_N
description: Clathrin/coatomer adaptor, adaptin-like, N-terminal
Protein sequence:
MSYDYHQNWGRDGGPRSSGGGYGGGPAGGHGGNRGSGGGGGGGGGGRGGRGRHPGHLKGREIGMWYAKKQGQKNKEAERQERAVVHMDERREEQIVQLLNSVQAKNDKESEAQISWFAPEDHGYGTEVSTKNTPCSENKLDIQEKKLINQEKKMFRIRNRSYIDRDSEYLLQENEPDGTLDQKLLEDLQKKKNDLRYIEMQHFREKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIRYVPEQKEHRSQFKRGFMQGHVNRQEKEEKEAIYKERWPDYVRELRRRYSASTVDVIEMMEDDKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKDTRSDHLTVVNAFEGWEEARRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPKDPESNINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVDWNDTKSRDCAVLSAIIDLIKTQEKATPRNFPPRFQDGYYS

Annotated regions:
phrase: SIRHLMELNALDKQEELTPLGVHLARLP
type: DOMAIN
name: HA2_WH
description: Helicase associated domain (HA2), winged-helix domain

phrase: IKAVICAGLYPKVAKIRLNLGKKRKMVKVYTKTDGLVAVHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGG
type: DOMAIN
name: DEAD-box_helicase_OB_fold
description: DEAD-box helicase, OB fold

phrase: ALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGR
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: SHIVLDEIH
type: CONSERVED_SITE
name: DNA/RNA_helicase_DEAH_CS
description: DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site

phrase: STLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRV
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: EKLPSYGMQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVE
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: MQKELVNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNA
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: VNLIDNHQVTVISGETGCGKTTQVTQFILDNYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQGSILYCTTGIILQWLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRSDLKVILMSATLNAEKFSEYFGNCPMIHI
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: ALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKIL
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: LSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKDTRSDHLTV
type: DOMAIN
name: Helicase-assoc_dom
description: Helicase-associated domain
Protein sequence:
MTKQNEKIINSSVKMLTISEDESGQRIDNYLLAKLKGVPKSLIYRIVRKGEVRVNKGRIKPEYKLQTGDVVRIPPVRVAEKNDAPISKNLNKVAALENQILFEDDCLIILNKPSGIAVHGGSGLNFGVIEALRALRPEARFLELVHRLDRDTSGILLIAKKRSALRNLHEQLRVKTVQKDYLALVRGQWQSHIKVIQASLLKNELSSGERIVRVSEQGKPSETRFSIEERYINATLVKASPVTGRTHQIRVHTQYAGHPIALDDKYGDKDFDKQMNELGLNRLFLHAFSIRFEHPKNGETLRFNASLDHQMKAILQKLRESK

Annotated regions:
phrase: LIILNKPSGIAVHGGSGLNFGVIEALRALRPEARFLELVHRLDRDTSGILLIAKKRSALRNLHEQLRVKTVQKDYLALVRGQWQSHIKVIQASLLKNELSSGERIVRVSEQGKPSETRFSIEERYINATLVKASPVTGRTHQIRVHT
type: DOMAIN
name: PsdUridine_synth_RsuA/RluA
description: Pseudouridine synthase, RsuA/RluA-like

phrase: QRIDNYLLAKLKGVPKSLIYRIVRKGEVRVNKGRIKPEYKLQTGDV
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: LIILNKPSGIAVHGGSGLNFGVIEALRALRPEARFLELVHRLDRDTSGILLIAKKRSALRNLHEQLRVKTVQKDYLALVRGQWQSHIKVIQASLLKNELSSGERIVRVSEQGKPSETRFSIEERYINATLVKASPVTGRTHQIRVHTQYAGHPIALDDKYGDKDFDKQMNELGLNRLFLHAFSIR
type: DOMAIN
name: PsdUridine_synth_RsuA/RluA
description: Pseudouridine synthase, RsuA/RluA-like

phrase: QRIDNYLLAKLKGVPKSLIYRIVRKGEVRVNKGRIKPEYKLQTGDVVRIPPVRVAEKNDAPISKNL
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: VHRLDRDTSGILLI
type: CONSERVED_SITE
name: PsdUridine_synth_RluA-like_CS
description: Pseudouridine synthase, RluA-like, conserved site
Protein sequence:
MLDILLFSLYFFFEPVLFFFFMVVFGFVALNNYSWLGCFYFFDSFSFILLIVMSLFILGVVLLSESNFMLLLLSEVLVVVCVFFFVPSNVILMYMYFELSMFPILVMILGYGSQIEKINSSYYLIFYAALCSFPFLFVYFKSFFFISLVYFDFNLSWEMVFVLSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGCLSFVHNNVWIVLAFLGMILASFCCMFQSDAKALAAYSSITHMSFVLMALVFIIMSGKTGGVILMLAHGYTSTLMFYLVGEFYHVSGSRMVYYMSSFFGSGMIMALLFAVVFLSNMGTPPSLSFLSEFIVISSSLNMMKFSFWVLFVYFFSAFYYSIYLLTSSVMGKGYVNFSIWNVGFSVPLVFMMYNIFWMSVFF

Annotated regions:
phrase: NVILMYMYFELSMFPILVMILGYGSQIEKINSSYYLIFYAALCSFPFLFVYFKSFFFISLVYFDFNLSWEMVFVLSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGCLSFVHNNVWIVLAFLGMILASFCCMFQSDAKALAAYSSITHMSFVLMALVFIIMSGKTGGVILMLAHGYTSTLMFYLVGEFYHVSGSRMVYYMSSFFGSGMIMALLFAVVFLSNMGTPPSLSFLSEFIVISSSLNMMKFSFWVLF
type: DOMAIN
name: ND/Mrp_TM
description: NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domain
Protein sequence:
MLMLFFTVAMVHIVALMSPGPDFFFVSQTAVSRSRKEAMMGVLGITCGVMVWAGVALLGLHLIIEKMAWLHTIIMVGGGLYLCWMGYQMLRGALKKQDAAASSPHIELAQSGRSFLKGLLTNLSNPKAIIYFGSVFSLFVGDNVGAAARWGIFALITLETLAWFTVVASLFALPKMRRGYQRLAKWIDGFAGALFAGFGIHLIISR

Annotated regions: