nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTAASLDPTAFSLDAASLAARLDAVFDQALRERRLVGAVAIVARHGEILYRRAQGLADREAGRPMREDTLFRLASVTKPIVALAVLRLVARGELALDAPVTRWLPEFRPRLADGSEPLVTIHHLLTHTSGLGYWLLEGAGSVYDRLGISDGIDLRDFDLDENLRRLASAPLSFAPGSGWQYSLALDVLGAVVERATGQPLAAAVDALVAQPLGMRDCGFVSAEPERFAVPYHDGQPEPVRMRDGIEVPLPEGHGAAVRFAPSRVFEPGAYPSGGAGMYGSADDVLRALEAIRANPGFLPETLADAARRDQAGVGAETRGPGWGFGYLSAVLDDPAAAGTPQHAGTLQWGGVYGHSWFVDRALGLSVLLLTNTAYEGMSGPLTIALRDAVYAR

Annotated regions:
phrase: FRLASVTKPIVALAV
type: ACTIVE_SITE
name: Beta-lactam_class-A_AS
description: Beta-lactamase, class-A active site

phrase: LDAVFDQALRERRLVGAVAIVARHGEILYRRAQGLADREAGRPMREDTLFRLASVTKPIVALAVLRLVARGELALDAPVTRWLPEFRPRLADGSEPLVTIHHLLTHTSGLGYWLLEGAGSVYDRLGISDGIDLRDFDLDENLRRLASAPLSFAPGSGWQYSLALDVLGAVVERATGQPLAAAVDALVAQPLGMRDCGFVSAEPERFAVPYHDGQPEPVRMRDGIEVPLPEGHGAAVRFAPSRVFEPGAYPSGGAGMYGSADDVLRALEAIRANPGFLPETLADAARRDQAGVGAETRGPGWGFGYLSAVLDDPAAAGTPQHAGTLQWGGVYGHSWFVDRALGLSVLLLTNTAYEGMSGPLTIA
type: DOMAIN
name: Beta-lactam-related
description: Beta-lactamase-related
Protein sequence:
MSQKIRIKLKSYDHNLVDKSAEKIVKTVKTTGAVVTGPIPLPTNKKIFTVLRSPHVNKKSREQFELSSYKRLLDIYSSSSKTIDALMKLELPSGVEVEIKV

Annotated regions:
phrase: RIKLKSYDHNLVDKSAEKIVKTVKTTGAVVTGPIPLPTNKKIFTVLRSPHVNKKSREQFELSSYKRLLDIYSSSSKTIDALMKLELPSGVEVEI
type: DOMAIN
name: Ribosomal_uS10_dom
description: Small ribosomal subunit protein uS10 domain

phrase: VKTTGAVVTGPIPLP
type: CONSERVED_SITE
name: Ribosomal_uS10_CS
description: Small ribosomal subunit protein uS10, conserved site

phrase: RIKLKSYDHNLVDKSAEKIVKTVKTTGAVVTGPIPLPTNKKIFTVLRSPHVNKKSREQFELSSYKRLLDIYSSSSKTIDALMKLELPSGVEVEI
type: DOMAIN
name: Ribosomal_uS10_dom
description: Small ribosomal subunit protein uS10 domain
Protein sequence:
MNALLNHMNTEQSEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLLDEKDVSPYNVLAITFTNKAAREMKERVQKLVGDQAEVIWMSTFHSMCVRILRRDADRIGIERNFTIIDPTDQKSVIKDVLKNENIDSKKFEPRMFIGAISNLKNELKTPADAQKEATDYHSQMVATVYSGYQRQLSRNEALDFDDLIMTTINLFERVPEVLEYYQNKFQYIHVDEYQDTNKAQYTLVKLLASKFKNLCVVGDSDQSIYGWRGADIQNILSFEKDYPEANTIFLEQNYRSTKTILNAANEVIKNNSERKPKGLWTANTNGEKIHYYEAMTERDEAEFVIREIMKHQRNGKKYQDMAILYRTNAQSRVLEETFMKSNMPYTMVGGQKFYDRKEIKDLLSYLRIIANSNDDISLQRIINVPKRGVGPSSVEKVQNYALQNNISMFDALGEADFIGLSKKVTQECLNFYELIQSLIKEQEFLEIHEIVDEVLQKSGYREMLERENTLESRSRLENIDEFMSVPKDYEENTPLEEQSLINFLTDLSLVADIDEADTENGVTLMTMHSAKGLEFPIVFIMGMEESLFPHIRAIKSEGDHEMQEERRICYVAITRAEEVLYITHATSRMLFGRPQSNMPSRFLKEIPESLLENHSSGKRQTIQPKAKPFAKRGFSQRTTSTKKQVSSSDWNVGDKVMHKAWGEGMVSNVNEKNGSIELDIIFKSQGPKRLLAQFAPIEKKED

Annotated regions:
phrase: NHMNTEQSEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLLDEKDVSPYNVLAITFTNKAAREMKERVQKLVGDQAEVIWMSTFHSMCVRILRRDADRIGIERNFTIIDPTDQKSVIKDVLKNENIDSKKFEPRMFIGAISNLKNELKTPADAQKEATDYHSQMVATVYSGYQRQLSRNEALDFDDLIMTTINLFERVPEVLEYYQNKFQYIHVDEYQDTNKAQYTLVKLLASKFKNLCVVGDSDQSIYGWRGADIQNILSFEKDYPEANTIFLEQNYRS
type: DOMAIN
name: UvrD-like_ATP-bd
description: UvrD-like helicase, ATP-binding domain

phrase: IFLEQNYRSTKTILNAANEVIKNNSERKPKGLWTANTNGEKIHYYEAMTERDEAEFVIREIMKHQRNGKKYQDMAILYRTNAQSRVLEETFMKSNMPYTMVGGQKFYDRKEIKDLLSYLRIIANSNDDISLQRIINVPKRGVGPSSVEKVQNYALQNNISMFDALGEADFIGLSKKVTQECLNFYELIQSLIKEQEFLEIHEIVDEVLQKSGYREMLERENTLESRSRLENIDEFMSVPKDYEENTPLEEQSLINFLTDLSLVADIDEADTENGVTLMTMHSAKGLEFPIVFIMGMEESLFPHIRAIKSEGDHEMQEERRICYVAITRAEEVLYITH
type: DOMAIN
name: DNA_helicase_UvrD-like_C
description: UvrD-like DNA helicase, C-terminal

phrase: MNTEQSEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLLDEKDVSPYNVLAITFTNKAAREMKERVQKLVGDQAEVIWMSTFHSMCVRILRRDADRIGIERNFTIIDPTDQKSVIKDVLKNENIDSKKFEPRMFIGAISNLKNELKTPADAQKEATDYHSQMVATVYSGYQRQLSRNEALDFDDLIMTTINLFERVPEVLEYYQNKFQYIHVDEYQDTNKAQYTLVKLLASKFKNLCVVGDSDQSIYGWRGADIQNILSFEKDY
type: DOMAIN
name: UvrD-like_ATP-bd
description: UvrD-like helicase, ATP-binding domain

phrase: KTILNAANEVIKNNSERKPKGLWTANTNGEKIHYYEAMTERDEAEFVIREIMKHQRNGKKYQDMAILYRTNAQSRVLEETFMKSNMPYTMVGGQKFYDRKEIKDLLSYLRIIANSNDDISLQRIINVPKRGVGPSSVEKVQNYALQNNISMFDALGEADFIGLSKKVTQECLNFYELIQSLIKEQEFLEIHEIVDEVLQKSGYREMLERENTLESRSRLENIDEFMSVPKDYEENTPLEEQSLINFLTDLSLVADIDEADTENGVTLMTMHSAK
type: DOMAIN
name: DNA_helicase_UvrD-like_C
description: UvrD-like DNA helicase, C-terminal
Protein sequence:
MGARVLVATTPGDGHVNPMVPVAQEMVSRGHEVRWYTGKAFRSTVERTGARHEPMRDAHDFGGMPREEAFPQHAGLTGITGMIAGFRDIFIEPAADQMTDLLALLEDFPADVLVTDETFFGAGFVSERTGIPVAWIATSIYVFSSRDTAPLGLGLPPSSSRLGRLRNTVLKQLTDRVVMRDLRRHADVVRDRVGLPRIRKGAFENIMRTPDLYLLGTVPSFEYPRGDMPPEVRFVGPFVSPAPPDFTPPAWWGELDSGRPVVHVTQGTVANDAERLLLPAIRALAAEDVLVVATTGAPLELEPMPANVRVERFIPHHALLPHVDAMVTNGGYGGVNTALAHGVPLVVAAATEEKHEVAARVSWSGAGVHLKKRRLSERDIRRAVRAVLDEPRFRVHAARLRDEYAARDAVVDAVDLIEGLV

Annotated regions:
phrase: AIRALAAEDVLVVATTGAPLELEPMPANVRVERFIPHHALLPHVDAMVTNGGYGGVNTALAHGVPLVVAAATEEKHEVAARVSWSGAGVHLKKRRLSERDIRRAVRAVLDEPRFRVHAARLRDEYAARD
type: DOMAIN
name: EryCIII-like_C
description: Erythromycin biosynthesis protein CIII-like, C-terminal domain
Protein sequence:
MEFTDLQIFIHLSDTKNFTKTATQNHMSPSTLSRQIQRLEDELGKTLFIRDNRQVKLTEYGEKFLQFAKTEWQNWQQFKQQLKDESDELCGEIKLFCSVTASYSHLPHVLKEFRQRYPKVEIQLTTGDPALALELIQAQQVDLALAGKPNNLPSSVVFHKIDDISLSLIAPRVACLATQLLQEKPIDWQQMPFIFPVEGHARQRIEQWLREKQIKHPKIYATVAGHEGIVPMVGLGFGLAMLPDAVIDSSPMNNQISRLNLDKPIEPFELGICTQKRNLEQPLVRAFWAMLE

Annotated regions:
phrase: MEFTDLQIFIHLSDTKNFTKTATQNHMSPSTLSRQIQRLEDELGKTLFIRDNRQVKL
type: DOMAIN
name: Tscrpt_reg_HTH_LysR
description: Transcription regulator HTH, LysR

phrase: DELCGEIKLFCSVTASYSHLPHVLKEFRQRYPKVEIQLTTGDPALALELIQAQQVDLALAGKPNNLPSSVVFHKIDDISLSLIAPRVACLATQLLQEKPIDWQQMPFIFPVEGHARQRIEQWLREKQIKHPKIYATVAGHEGIVPMVGLGFGLAMLPDAVIDSSPMNNQISRLNLDKPIEPFELGICTQKRNLEQPLVRAFWAM
type: DOMAIN
name: LysR_subst-bd
description: LysR, substrate-binding

phrase: TDLQIFIHLSDTKNFTKTATQNHMSPSTLSRQIQRLEDELGKTLFIRDNRQVKLTEYG
type: DOMAIN
name: Tscrpt_reg_HTH_LysR
description: Transcription regulator HTH, LysR

phrase: EIKLFCSVTASYSHLPHVLKEFRQRYPKVEIQLTTGDPALALELIQAQQVDLALAGKPNNLPSSVVFHKIDDISLSLIAPRVACLATQLLQEKPIDWQQMPFIFPVEGHARQRIEQWLREKQIKHPKIYATVAGHEGIVPMVGLGFGLAMLPDAVIDSSPMNNQISRLNLDKPIEPFELGICTQKRNLEQPLVRAFWA
type: DOMAIN
name: IlvY_PBP2
description: HTH-type transcriptional activator IlvY, PBP2 domain
Protein sequence:
MAAPAGGGGSAVSVLAPNGRRHTVKVTPSTVLLQVLEDTCRRQDFNPCEYDLKFQRSVLDLSLQWRFANLPNNAKLEMVPASRSREGPENMVRIALQLDDGSRLQDSFCSGQTLWELLSHFPQIRECLQHPGGATPVCVYTRDEVTGEAALRGTTLQSLGLTGGSATIRFVMKCYDPVGKTPGSLGSSASAGQAAASAPLPLESGELSRGDLSRPEDADTSGPCCEHTQEKQSTRAPAAAPFVPFSGGGQRLGGPPGPTRPLTSSSAKLPKSLSSPGGPSKPKKSKSGQDPQQEQEQERERDPQQEQERERPVDREPVDREPVVCHPDLEERLQAWPAELPDEFFELTVDDVRRRLAQLKSERKRLEEAPLVTKAFREAQIKEKLERYPKVALRVLFPDRYVLQGFFRPSETVGDLRDFVRSHLGNPELSFYLFITPPKTVLDDHTQTLFQANLFPAALVHLGAEEPAGVYLEPGLLEHAISPSAADVLVARYMSRAAGSPSPLPAPDPAPKSEPAAEEGALVPPEPIPGTAQPVKRSLGKVPKWLKLPASKR

Annotated regions:
phrase: APNGRRHTVKVTPSTVLLQVLEDTCRRQDFNPCEYDLKFQRSVLDLSLQWRFANLPNNAKLE
type: DOMAIN
name: TUG-UBL1
description: TUG ubiquitin-like domain

phrase: RYPKVALRVLFPDRYVLQGFFRPSETVGDLRDFVRSHLGNPELSFYLFITPPKTVLDDHTQTLFQANLFPAA
type: DOMAIN
name: UBX_dom
description: UBX domain

phrase: ERYPKVALRVLFPDRYVLQGFFRPSETVGDLRDFVRSHLGNPELSFYLFITPPKTVLDDHTQTLFQANLFPAALVH
type: DOMAIN
name: UBX_dom
description: UBX domain
Protein sequence:
MDNKISPEAQVAELELDAVIGFNGHVPTGLKCHPDQEHLIFPLGCTILIQAINTQEQNFLQGHGNNVSCLAISRSGRYIASGQVTFMGFKADIILWDYKKRELLARLSLHKGKIEALAFSPNDLYLVSLGGPDDGSVVVWSIAKRDAICGSPAAGLNVGNATNVIFSRCRDEMFVTAGNGTIRVWELDLPNRKIWPTECQTGQMKRIVMSIGMADDDSFFYLGTTTGDILKMNPRTKLLTDAGPAKDKFSLGVSAIRCLKMGGLLVGSGAGLLVFCKSPSYKPIKKIQSQGGITSITLRGEGHQFFVGTEESHIYRVSFTDFKETLIATCHFEAVEDIVFPFGTAELFATCAKKDIRVWHTSSNSAHRIGVTAIATTSDCKRVISGGGEGEVRVWQIGCQTQKLEEALKEHKSSVSCIRVKKNNEECVTASTDGTCIIWDLVRLRRNQMILANTLFQCVCYHPEEFQIITSGTDRKIAYWEVFDGTVIRELEGSLSGSINGMDITQEGVHFVTGGNDHLVKVWDYNEGEVTHVGVGHSGNITRIRISPGNQYIVSVSADGAILRWKYPYTS

Annotated regions:
phrase: EGSLSGSINGMDITQEGVHFVTGGNDHLVKVWDYNEGEVTH
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: HVGVGHSGNITRIRISPGNQYIVSVSADGAILR
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: ELLARLSLHKGKIEALAFSPNDLYLVSLGGPDDGSVVVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: SAHRIGVTAIATTSDCKRVISGGGEGEVRV
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: ALKEHKSSVSCIRVKKNNEECVTASTDGTCIIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: TVIRELEGSLSGSINGMDITQEGVHFVTGGNDHLVKVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: QNFLQGHGNNVSCLAISRSGRYIAS
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: GVGHSGNITRIRISPGNQYIVSVSADGAILRWKYPYT
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: NSAHRIGVTAIATTSDCKRVISGGGEGEVRVWQ
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: CVTASTDGTCIIWD
type: CONSERVED_SITE
name: WD40_repeat_CS
description: WD40 repeat, conserved site

phrase: LSLHKGKIEALAFSPNDLYLVSLGGPDDGSVVVWS
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LKEHKSSVSCIRVKKNNEECVTASTDGTCIIWD
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: DGTVIRELEGSLSGSINGMDITQEGVHFVTGGNDHLVKVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: AKKDIRVWHTSSNSAHRIGVTAIATTSDCKRVISGGGEGEVRVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: NTQEQNFLQGHGNNVSCLAISRSGRYIASGQVTFMGFKADIILW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: SYKPIKKIQSQGGITSITLRGEGHQFFVGTEESHIYRV
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: EGEVTHVGVGHSGNITRIRISPGNQYIVSVSADGAILRW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: RLRRNQMILANTLFQCVCYHPEEFQIITSGTDRKIAYW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: TQKLEEALKEHKSSVSCIRVKKNNEECVTASTDGTCIIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: CGSPAAGLNVGNATNVIFSRCRDEMFVTAGNGTIRVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: KRELLARLSLHKGKIEALAFSPNDLYLVSLGGPDDGSVVVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat
Protein sequence:
MAEVRNYTFNFGPQHPAAHGVLRLIVEVDGEVIQRIDPHIGLLHRATEKLAESKPYNQTIGYMDRLDYVSMMANEHGYVLAIEKLLGIEPPIRAKYIRTMFDEITRILNHLLWLGAHALDVGAMTVFLYCFREREDLMDCYEAVSGARMHATYYRPGGVYRDLPDSMPKYKPSRWHNEKAVKKMNEAREGSLLDFIWDFTARFPNLIDEYESLLTDNRIWKQRTVGIGVVSAERALQLGFTGPMLRASGVEWDLRKKQPYAAYDRVDFDIPIGREGDCYDRYLVRIEEMRQSNRIIRQCVEWLRKNPGPVIIDDYKIVPPQREVMKRDMEALIHHFKLFTEGYIVPEGEAYAAVEQPKGEFGVYIVSDGANKPYRVKVRAASYPHLAAMNEMCRGHMIADLVAIISSIDIVFGEIDR

Annotated regions:
phrase: LHRATEKLAES
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_49kDa_CS
description: NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site

phrase: DVGAMTVFLYCFREREDLMDCYEAVSGARMHATYYRPGGVYRDLPDSMPKYKPSRWHNEKAVKKMNEAREGSLLDFIWDFTARFPNLIDEYESLLTDNRIWKQRTVGIGVVSAERALQLGFTGPMLRASGVEWDLRKKQPYAAYDRVDFDIPIGREGDCYDRYLVRIEEMRQSNRIIRQCVEWLRKNPGPVIIDDYKIVPPQREVMKRDMEALIHHFKLFTEGYIVPEGEAYAAVEQPKGEFGVYIVSDGANKPYRVKVRAASYPHLAAMNEMCRGHMIADLVAIISSIDIVFGEID
type: DOMAIN
name: NADH_Q_OxRdtase_suD
description: NADH-quinone oxidoreductase, subunit D
Protein sequence:
MIRLGNQMCRQVAFNIQTVFRNPGTANNPRLITRKMTQQRPPVNWTTSIPNQAAKDKEKIAPLGWFLLLIPATTFGLGCWQVKRKIWKEQLIKDLNKQLSTAPVALPDDLTDLAQMEYRLVKIRGRFLHDKEMRLGPRSLIRPDGVETQGGLFSQRDSGNGYLIVTPFQLADRDDIVLVNRGWVSRKQVEPETRPLGQQQAEVELTAVVRKGEARPQFTPDHKGNVYLYRDLARMCAATGAAPVFLDAVYDPQTAAHAPIGGQTRVTLRNDHLSYLVTWFSLSAATSFLWYRQIVKRIPF

Annotated regions:
Protein sequence:
MAKKYFGTDGVRGEVGQFPITPDFVLKLGYAAGQVLVQHDTDQKPTVLIGKDTRISGYMLEAALVAGFTAAGVNVVQTGPLPTPGVAYLTRALRLSAGVMISASHNAYSDNGIKFFAEGGVKLSDEVELEIEAKIDGEMKTLPSARLGRARRISGADDRYIEFCKSTFPSHSDLRGLKLVIDTANGAGYGVAPKVFHELGAQVVSIGDEPNGYNINEKCGATYTKTLQAAVLQHEADYGIALDGDGDRLMMVDKNGKVYDGDSLIYVIAKARAREGINIGGVVGTVMTNMAMEIALKEQGVDFCRAKVGDRYVLAQLNQRSWLIGGEASGHILCMDKHNTGDGIISALQVLAALQTLNQDLATVCADWQPYPQTMINVRIQKGQKWQEASKDVLAEVEKELEGKGRVVLRASGTEPVVRVMVEARQADWARDGAERIASAIGSL

Annotated regions:
phrase: RYIEFCKSTFPSHSDLRGLKLVIDTANGAGYGVAPKVFHELGAQVVSIGDEPNGYNINEKCGATYTKTLQAAVLQHEADYGIALDGDGDRLMMVDKN
type: DOMAIN
name: A-D-PHexomutase_a/b/a-II
description: Alpha-D-phosphohexomutase, alpha/beta/alpha domain II

phrase: MINVRIQKGQKWQEASKDVLAEVEKELEGKGRVVLRASGTEPVVRVMVEARQADWARDGAERIA
type: DOMAIN
name: A-D-PHexomutase_C
description: Alpha-D-phosphohexomutase, C-terminal

phrase: KYFGTDGVRGEVGQFPITPDFVLKLGYAAGQVLVQHDTDQKPTVLIGKDTRISGYMLEAALVAGFTAAGVNVVQTGPLPTPGVAYLTRALRLSAGVMISASHNAYSDNGIKFFAEGGVKLSDEVELEIEAKIDGE
type: DOMAIN
name: A-D-PHexomutase_a/b/a-I
description: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I

phrase: DGDSLIYVIAKARAREGINIGGVVGTVMTNMAMEIALKEQGVDFCRAKVGDRYVLAQLNQRSWLIGGEASGHILCMDKHNTGDGIISALQVLAALQTLNQDLATVCADWQP
type: DOMAIN
name: A-D-PHexomutase_a/b/a-III
description: Alpha-D-phosphohexomutase, alpha/beta/alpha domain III
Protein sequence:
MSKSYRIAILGATGAVGKELLELLESRNFPLSDLRLLASQRSVGRKLQFKGEDLPVEVVSDRAFNNVDLVLASAGGATSKAWASIAVNAGAVVIDNSSAYRMNPEVPLVIPEVNPQAAANHKGIIANPNCTTILMAVAVWPLHCHQPVKRIVAATYQSASGAGALAMEEVKTQTSAILEGKQPTPSVFPYPLAFNLFPHNSPLNDLGYCEEEMKMVNETRKIFNNQQIKITATCVRVPVLRAHSEAINLEFESPFSAVEAKEILSRSPGVKLVEDWKANYFPMPIEATGRDEVLVGRIRSDISHECGLELWLCGDQIRKGAALNAVQIAELLVEKNLLQPAIAISQ

Annotated regions:
phrase: RIAILGATGAVGKELLELLESRNFPLSDLRLLASQRSVGRKLQFKGEDLPVEVVSDRAFNNVDLVLASAGGATSKAWASIAVNAGAVVIDNSSAYRMNPEVPLVIPEVNPQAAA
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: PLHCHQPVKRIVAATYQSASGAGALAMEEVKTQTSAILEGKQPTPSVFPYPLAFNLFPHNSPLNDLGYCEEEMKMVNETRKIFNNQQIKITATCVRVPVLRAHSEAINLEFESPFSAVEAKEILSRSPGVKLVEDWKANYFPMPIEATGRDEVLVGRIRSDISHECGLELWLCGDQIR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: RIAILGATGAVGKELLELLESRNFPLSDLRLLASQRSVGRKLQFKGEDLPVEVVSDRAFNNVDLVLASAGGATSKAWASIAVNAGAVVIDNSSAYRMNPEVPLVIPEVNPQAAAN
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MKKVLLSAAMATAFFGMAAANAADTNVGGGQVNFFGKVTDVSCTVSVNGQGSDANVYLSPVTLTEVKAAAADTYLKPKSFTIDVSDCQAADGTKQDDVSKLGVNWTGGNLLAGATAKQQGYLANTEAAGAQNIQLVLSTDNATALTNKIIPGDSTQPKAAGDASAVQDGARFTYYVGYATSTPTTVTTGVVNSYATYEITYQ

Annotated regions:
phrase: NFFGKVTDVSCTVSVNGQGSDANVYLSPVTLTEVKAAAADTYLKPKSFTIDVSDCQAADGTKQDDVSKLGVNWTGGNLLAGATAKQQGYLANTEAAGAQNIQLVLSTDNATALTNKIIPGDSTQPKAAGDASAVQDGARFTYYVGYATSTPTTVTTGVVNSYATYEITY
type: DOMAIN
name: Adhesion_dom_fimbrial
description: Fimbrial-type adhesion domain
Protein sequence:
MRAKEIWKSCQRWWIWSILGFWMLMNCNTENLWVTVYYGVPVWKEAKTTLFCASDAKAYETEVHNVWATHACVPTDPNPQEIVLENVTENFNMWKNEMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCGNATINXXVTSEMKNCSFNTTTELRDKKRKEYALFYRLDIVPLDNSSEYRLINCNTSAITQACPKVSFDPIPIHYCAPAGYAILKCNNKTFNGTGPCNNVSTVQCTHGIRPVVSTQLLLNGSLAEGDIIIRSENLTDNAKTIIVHLNKXVEIVCTRPHNNTRKSVRIGPGQTFYATGGIIGNIRQAHCIVGDXWNTTLEKVKKKLKEHFNKTIRFDQSAGGDLEITTHSFNCRGEFFYCNTSGLFNKSGTXNSTITLQCRIKQIINMWQGVGRAMYAPPIEGNITCKSNITGLLLTRDGGDGDDNSTETFRPGGGNMRDNWRSELYKYKVVEIKPLGVAPTKAKRRVVEREKRAVGIGAVFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQTRVLALERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKTQNDIWDNMTWMQWDREISNYTDTIYRLLEDSQNQQEKNEKDLLALDSWTNLWNWFNITNWLWYIRIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQTLTPNPREPDRRGGIEQEGGEQDRXRSVRLVSGFLALAWDDLRSLCLYSYHLLRDFILIALRAVELLGRSSLRGLQRGW

Annotated regions:
phrase: VQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQTRVLALERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKTQNDIWDNMTWMQWDREISNYTDTIYRLLEDSQNQQEKNEKDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKEAKTTLFCASDAKAYETEVHNVWATHACVPTDPNPQEIVLENVTENFNMWKNEMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCGNA
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: ATINXXVTSEMKNCSFNTTTELRDKKRKEYALFYRLDIVPLDNSSEYRLINCNTSAITQACPKVSFDPIPIHYCAPAGYAILKCNNKTFNGTGPCNNVSTVQCTHGIRPVVSTQLLLNGSLAEGDIIIRSENLTDNAKTIIVHLNKXVEIVCTRPHNNTRKSVRIGPGQTFYATGGIIGNIRQAHCIVGDXWNTTLEKVKKKLKEHFNKTIRFDQSAGGDLEITTHSFNCRGEFFYCNTSGLFNKSGTXNSTITLQCRIKQIINMWQGVGRAMYAPPIEGNITCKSNITGLLLTRDGGDGDDNSTETFRPGGGNMRDNWRSELYKYKVVEIKPLGVAPTKAKRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: MGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQTRVLALERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKTQNDIWDNMTWMQWDREISNYTDTIYRLLEDSQNQQEKNEKDLLALDSWTNLWNWFNITNWLWYIRIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MEDLDALLSDLETTTSHMPRSGAPKERPAEPLTPPPSYGHQPQTGSGESSGASGDKDHLYSTVCKPRSPKPAAPAAPPFSSSSGVLGTGLCELDRLLQELNATQFNITDEIMSQFPSSKVASGEQKEDQSEDKKRPSLPSSPSPGLPKASATSATLELDRLMASLSDFRVQNHLPASGPTQPPVVSSTNEGSPSPPEPTGKGSLDTMLGLLQSDLSRRGVPTQAKGLCGSCNKPIAGQVVTALGRAWHPEHFVCGGCSTALGGSSFFEKDGAPFCPECYFERFSPRCGFCNQPIRHKMVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQLFAPRCQGCQGPILDNYISALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFHARRGSLCATCGLPVTGRCVSALGRRFHPDHFTCTFCLRPLTKGSFQERAGKPYCQPCFLKLFG

Annotated regions:
phrase: CGFCNQPIRHKMVTALGTHWHPEHFCCVSCGEP
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: LCATCGLPVTGRCVSALGRRFHPDHFTCTFCLRPLTKGSFQERAGKPYCQPCFLKLF
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: CATCGLPVTGRCVSALGRRFHPDHFTCTFCLRP
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: GLCGSCNKPIAGQVVTALGRAWHPEHFVCGGCSTALGGSSFFEKDGAPFCPECYFERFS
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: CQGCQGPILDNYISALSALWHPDCFVCRECFAP
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: RCGFCNQPIRHKMVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRR
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: RCQGCQGPILDNYISALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCEN
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: LCGSCNKPIAGQVVTALGRAWHPEHFVCGGCSTALGGSSFFEKDGAPFCPE
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: LCATCGLPVTGRCVSALGRRFHPDHFTCTFCLRPLTKGSFQERAGKPYCQP
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: PRCQGCQGPILDNYISALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFHARRG
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: CQGCQGPILDNYISALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFHA
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: CGSCNKPIAGQVVTALGRAWHPEHFVCGGCSTALGGSSFFEKDGAPFCPECYFER
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: CGFCNQPIRHKMVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQL
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: CATCGLPVTGRCVSALGRRFHPDHFTCTFCLRPLTKGSFQERAGKPYCQPCFLKL
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: CGSCNKPIAGQVVTALGRAWHPEHFVCGGCSTALGGSSFFEKDGAPFCPECY
type: DOMAIN
name: Paxillin_TGFB1I1_LIM_dom1
description: Paxillin/TGFB1I1, LIM domain 1

phrase: RCGFCNQPIRHKMVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQLF
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type
Protein sequence:
MSDARNNRKVYRGRVVSDKMDKTITVVVETTKTDARYGKRVKYSKKYKAHDENGEAHTGDIVEIMETRPLSATKRFRLVDIVEKAVII

Annotated regions:
phrase: GDIVEIMETRPL
type: CONSERVED_SITE
name: Ribosomal_uS17_CS
description: Small ribosomal subunit protein uS17, conserved site
Protein sequence:
MNKTKIYINGKLIGTCDNPEEFVEEIRAKRRSGEVSHEMNITHYPENHEIYIFTDPGRARRPLIIVEDGEPLLKEEHLEKLSSGEMEWDDLISQGIIEYLDAEEEENTYIAMSPEEVTEEHTHLEIDPSTMLGICAGIIPFANHNSSPRNTMEAGMTKQALGLYASNYNLRTDTRAHLLHHPQVPIVKTRIIDVTGYDERPSGQNFVVAVMSYEGYNMEDALILNKASLERGLARSSFFRSYEATERRYPGGQEDRFEIPEKGVRGYRSERDYRHLDEDGIINPETEVSSGDVLIGKTSPPRFLEEIDEFGTVAERRRETSVTVRHGEEGIVDAVLLTETVEGSRLAKIRVREQRQPEFIGDKFASRHGQKGVVGLIVSQEDMPFTEDGVVPDLIVNPHAIPSRMSVGQVLEMLAGKAACMEGRRVDGTPFTGEEEKDLKEALKANGFESAGVETLYNGITGERIEAEIFIGVAYYQKLHHMTTDRIYARSRGPVQVLTRQPTEGRAREGGLRFGEMERDCLIAHGAALALKERLLDESDKYEALVCAECGMIAIYDKIRDKKYCPICEDSESFPVEISYAFKLLLDELKSLCIFPKLVLEDKA

Annotated regions:
phrase: GDKFASRHGQKG
type: CONSERVED_SITE
name: RNA_pol_bsu_CS
description: RNA polymerase, beta subunit, conserved site

phrase: WDDLISQGIIEYLDAEEEENTYIAMSPEEVTEE
type: DOMAIN
name: RNA_pol_Rpb2_5
description: RNA polymerase Rpb2, domain 5

phrase: GGLRFGEMERDCLIAHGAALALKERLLDESDKYEALVCAECGMIAIYDKIRDKKYCPICEDSESFPVEISYAFKLLLDELKSLCIFPKLV
type: DOMAIN
name: RNA_pol_Rpb2_7
description: RNA polymerase Rpb2, domain 7

phrase: CAGIIPFANHNSSPRNTMEAGMTKQALGLYASNYNLRTDTRAHLLHHPQVPIVKTRIIDVTGYDERPSGQNFVVAVMSYEGYNMEDALILNKASLERGLARSSFFRSYEATERRYPGGQEDRFEIPEKGVRGYRSERDYRHLDEDGIINPETEVSSGDVLIGKTSPPRFLEEIDEFGTVAERRRETSVTVRHGEEGIVDAVLLTETVEGSRLAKIRVREQRQPEFIGDKFASRHGQKGVVGLIVSQEDMPFTEDGVVPDLIVNPHAIPSRMSVGQVLEMLAGKAACMEGRRVDGTPFTGEEEKDLKEALKANGFESAGVETLYNGITGERIEAEIFIGVAYYQKLHHMTTDRIYARSRGPVQVLTRQPTEGRA
type: DOMAIN
name: DNA-dir_RNAP_su2_dom
description: DNA-directed RNA polymerase, subunit 2, hybrid-binding domain

phrase: IYINGKLIGTCDNPEEFVEEIRAKRRSGEVSHEMNITHYPENHEIYIFTDPGRARRPLIIV
type: DOMAIN
name: RNA_pol_Rpb2_4
description: RNA polymerase Rpb2, domain 4
Protein sequence:
MSKLRWLIMAFLVCLLLLTPKDLEGLQLVGAIRNHLFWSTSSPLHHLPDLLEEESVQVNEMELWGDDDGRRRMMGEEVRRQAGAGRMSEVKMGGDRPLVAVIKKEKHGAKKKKDDDSSGMVVVGLSAACVALVTLVGICFCACRDSESSSSPYDLRDEKPLLSLNLSDGPSRKSCATTIDVSRLGALTAECEQHLHGGAGAGDHNTTNYNLRKPAGVGSMSMNKVSMQSQAMRMSSHEITTIAGAGRVENKVSTIAPSAAAAAVASAGGGQVPAAPPPPAGPPPPAPPPLPPSHHHHHGHHPPPPHPLPPGAGAGAGTGAPPPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGGPPPPALPGGPRARGPPPFKKSPGAAAAAAQADPNKAKLKPFFWDKVTANPNQAMVWDQIKAGSFQFNEEMIESLFGAQSTEKKSTDAKKESGKEATQFVRILDPKKAQNLAISLKALSVSAEQVRAAVMEGHDLPPDLIQTLVRWSPTSDEELRLRLYAGEPAQLGPAEQFMRAIIDVPYLYQRLDALLFMAALPEEAAAVEQSFATLEVACEELRGSRLFKKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLADVKGVDGKTTLLHFVVQEIIRSEGVRAARAASGGGGGSSISSISSSDDLILLQSQSSIGSNSGRSSVDASSLEQEQDETERYRQLGLGVVSSLGDDLQNVRKAASFDADALTITVASLGHRLVKANEFLSTGMRSLEEDSGFQRRLASFVQQSQEQVTRLLEDEKRLRSLVRATVDYFHGSTGKDEGLRLFVVVRDFLGILDKVCREVKEQAAANAKAKKQQQPTPAPRSRQSSQSSFRDPRQQIQDRRAAALSRNNSSSSSSDSDD

Annotated regions:
phrase: AAQADPNKAKLKPFFWDKVTANPNQAMVWDQIKAGSFQFNEEMIESLFGAQSTEKKSTDAKKESGKEATQFVRILDPKKAQNLAISLKALSVSAEQVRAAVMEGHDLPPDLIQTLVRWSPTSDEELRLRLYAGEPAQLGPAEQFMRAIIDVPYLYQRLDALLFMAALPEEAAAVEQSFATLEVACEELRGSRLFKKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLADVKGVDGKTTLLHFVVQEIIRSEGVRAARAASGGGGGSSISSISSSDDLILLQSQSSIGSNSGRSSVDASSLEQEQDETERYRQLGLGVVSSLGDDLQNVRKAASFDADALTITVASLGHRLVKANEFLSTGMRSLEEDSGFQRRLASFVQQSQEQVTRLLEDEKRLRSLVRATVDYFHGSTGKDEGLRLFVVVRDFLGILDKVCREVKEQAAAN
type: DOMAIN
name: FH2_Formin
description: Formin, FH2 domain

phrase: AAQADPNKAKLKPFFWDKVTANPNQAMVWDQIKAGSFQFNEEMIESLFGAQSTEKKSTDAKKESGKEATQFVRILDPKKAQNLAISLKALSVSAEQVRAAVMEGHDLPPDLIQTLVRWSPTSDEELRLRLYAGEPAQLGPAEQFMRAIIDVPYLYQRLDALLFMAALPEEAAAVEQSFATLEVACEELRGSRLFKKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLADVKGVDGKTTLLHFVVQEIIRSEGVRAARAASGGGGGSSISSISSSDDLILLQSQSSIGSNSGRSSVDASSLEQEQDETERYRQLGLGVVSSLGDDLQNVRKAASFDADALTITVASLGHRLVKANEFLSTGMRSLEEDSGFQRRLASFVQQSQEQVTRLLEDEKRLRSLVRATVDYFHGSTGKDEGLRLFVVVRDFLGILDKVCREVKEQAAANAKAKKQQQPTP
type: DOMAIN
name: FH2_Formin
description: Formin, FH2 domain

phrase: ADPNKAKLKPFFWDKVTANPNQAMVWDQIKAGSFQFNEEMIESLFGAQSTEKKSTDAKKESGKEATQFVRILDPKKAQNLAISLKALSVSAEQVRAAVMEGHDLPPDLIQTLVRWSPTSDEELRLRLYAGEPAQLGPAEQFMRAIIDVPYLYQRLDALLFMAALPEEAAAVEQSFATLEVACEELRGSRLFKKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLADVKGVDGKTTLLHFVVQEIIRSEGVRAARAASGGGGGSSISSISSSDDLILLQSQSSIGSNSGRSSVDASSLEQEQDETERYRQLGLGVVSSLGDDLQNVRKAASFDADALTITVASLGHRLVKANEFLSTGMRSLEEDSGFQRRLASFVQQSQEQVTRLLEDEKRLRSLVRATVDYFHGSTGKDEGLRLFVVVRDFLGI
type: DOMAIN
name: FH2_Formin
description: Formin, FH2 domain
Protein sequence:
MPKIVILPHQDLCPDGAVLEANSGETILDAALRNGIEIEHACEKSCACTTCHCIVREGFDSLPESSEQEDDMLDKAWGLEPESRLSCQARVTDEDLVVEIPRYTINHAREH

Annotated regions:
phrase: PDGAVLEANSGETILDAALRNGIEIEHACEKSCACTTCHCIVREGFDSLPESSEQEDDMLDKAWGLEPESRLSCQARVTDEDLVV
type: DOMAIN
name: 2Fe-2S_ferredoxin-type
description: 2Fe-2S ferredoxin-type iron-sulfur binding domain

phrase: PKIVILPHQDLCPDGAVLEANSGETILDAALRNGIEIEHACEKSCACTTCHCIVREGFDSLPESSEQEDDMLDKAWGLEPESRLSCQARVTDEDLVVEIPRY
type: DOMAIN
name: 2Fe-2S_ferredoxin-type
description: 2Fe-2S ferredoxin-type iron-sulfur binding domain

phrase: CEKSCACTTC
type: BINDING_SITE
name: Adrenodoxin_Fe-S_BS
description: Adrenodoxin, iron-sulphur binding site

phrase: CPDGAVLEANSGETILDAALRNGIEIEHACEKSCACTTCHCIVREGFDSLPESSEQEDDMLDKAWGLEPESRLSCQARV
type: DOMAIN
name: 2Fe-2S_ferredoxin-type
description: 2Fe-2S ferredoxin-type iron-sulfur binding domain
Protein sequence:
MPREQGVRVVARNRRATHDYTIGDTWEAGLVLQGTEVKSLRAGKATLTDAFAQVDERGEVWMYNLHIPEYAFGTWRNHDVMRKRKLLLNKREIAKLSREADGPGKTIVPLQLYFKDGYAKVEIAVGTGKRDWDKRQAIRERDAKREAQRALANRVRNRKR

Annotated regions:
phrase: AGLVLQGTEVKS
type: CONSERVED_SITE
name: SsrA-bd_prot_CS
description: SsrA-binding protein, conserved site
Protein sequence:
MLRLPEAHRDLFKKPFGTLYTSVDELLPRLEGRAVYAVGDVVTHNLLAAGVVPDIAIIDGYTMRTPCNRSPLLRARRLTVKNPPGTITGELTDAIDEAVRGQPAVIFVDGEEDLAVIPLVLAAPDGAAVLYGQPAEGVVLRLVDTAAKQEAASMLSIFVRE

Annotated regions: