nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MRVYLDLMQKILDEGTVKSDRTGTGTVSLFGHQMRFNLAQGFPLVTTKKCHLRSIIHELLWFLNGDTNTAYLKEQGVSIWDEWADENGDLGPVYGAQWRSWPAADGAVIDQIQRAVDDIKHNPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYALLTHMMAQQCDLEVGDFVWTGGDVHLYSNHMEQTALQLSREPRPLPQLAIKRKPDSIFDYRFEDFEILGYDPHPGIKAPVAI

Annotated regions:
phrase: YLDLMQKILDEGTVKSDRTGTGTVSLFGHQMRFNLAQGFPLVTTKKCHLRSIIHELLWFLNGDTNTAYLKEQGVSIWDEWADENGDLGPVYGAQWRSWPAADGAVIDQIQRAVDDIKHNPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYALLTHMMAQQCDLEVGDFVWTGGDVHLYSNHME
type: DOMAIN
name: Thymidate_synth/dCMP_Mease_dom
description: Thymidylate synthase/dCMP hydroxymethylase domain

phrase: VYLDLMQKILDEGTVKSDRTGTGTVSLFGHQMRFNLAQGFPLVTTKKCHLRSIIHELLWFLNGDTNTAYLKEQGVSIWDEWADENGDLGPVYGAQWRSWPAADGAVIDQIQRAVDDIKHNPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYALLTHMMAQQCDLEVGDFVWTGGDVHLYSNHMEQTALQLSREPRPLPQLAIKRKPDSIFDYRFEDFEILGYDPHPGIKAPVA
type: DOMAIN
name: Thymidate_synth/dCMP_Mease_dom
description: Thymidylate synthase/dCMP hydroxymethylase domain

phrase: RRIIVSAWNVGELDKMALAPCHAFFQFY
type: ACTIVE_SITE
name: Thymidylate_synthase_AS
description: Thymidylate synthase, active site
Protein sequence:
MKITKNKILKNKKIINFKYQKLLDLFYNVNNQKKNNQLLSYLYSFSGKIIFSLTEEKSLKKILRFLMRHKIHPQYIKRIIDIKKEIDYFYMIEEIKNGFIDKKNNILFLCTKDLLPILIDDKYIGNIKKNTNNINKFNLSQLILNHPVMHIEHGIGRYKGLTTIETASIQSEYLVISYAEGDKLYVPVSNLHLVSPYTGTSIENAPLHKLGGDDWNKEKHKISKTVYDHAAQLLHIYAKRESKTGFAFKKNIEKYDLFCNDCSFKTTSDQNEVMKFVLKDMSKPIPMDRLICGDVGFGKTEIAMRASFLAVSNKKQVAILVPTTLLAQQHYKNFKIRFSNWPVNINILSRFQTQKEQDLIFKHTKNGRINIIIGTHKLLFKNIEWCSLGLLIIDEEHRFGVSHKEIIKKIYSNIDILTLTATPIPRTLNMAMTGIKDLSIIAKPPAQRLAIKTFIQEYSPILIRKTILREISRGGQVYYIYNKVQNIMNIAERLSILIPEASIKIGHGQMKNIDLKKVMNEFYNNKFNVLICTTIIESGVDIARANTIIIENSDHFGLSQLHQLRGRIGRSNNQAYALLLVNNFNKITSDAKKRLEAISSVDNFGGGFSLSNQDLEIRGVGEILGKEQSGHIKNIGFSLYMDLLKNAIDLLKNGKIFSVEKSLKKPLEIDLHVSSLLPSSYILDINTRLFFYKKLANAIHEKQIEEIKYELIDQFGKLPDFSKNLILIAKIRLIADKIGIKYIKSNNNIGIIEFNDYGSINTEYLLKM

Annotated regions:
phrase: PVMHIEHGIGRYKGLTTIETASIQSEYLVISYAEGDKLYVPVSNLHLVSP
type: DOMAIN
name: CarD-like/TRCF_RID
description: CarD-like/TRCF, RNAP-interacting domain

phrase: CSFKTTSDQNEVMKFVLKDMSKPIPMDRLICGDVGFGKTEIAMRASFLAVSNKKQVAILVPTTLLAQQHYKNFKIRFSNWPVNINILSRFQTQKEQDLIFKHTKNGRINIIIGTHKLLFKNIEWCSLGLLIIDEEHRFGVSHKEIIKKIYSNIDILTLTATPIPRTLNMAMTGIKDLSIIAKPPAQRLAIKT
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: DMSKPIPMDRLICGDVGFGKTEIAMRASFLAVSNKKQVAILVPTTLLAQQHYKNFKIRFSNWPVNINILSRFQTQKEQDLIFKHTKNGRINIIIGTHKLLFKNIEWCSLGLLIIDEEHRFGVSHKEIIKKIYSNIDILTLTATPIPRTLNMAMTGIKDLSI
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: LIRKTILREISRGGQVYYIYNKVQNIMNIAERLSILIPEASIKIGHGQMKNIDLKKVMNEFYNNKFNVLICTTIIESGVDIARANTIIIENSDHFGLSQLHQLRGRIGRSNNQAYALLLVNNFNKITSDAKKRLEAISSVDNFGGGFSLSNQDLEIRGV
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: LHVSSLLPSSYILDINTRLFFYKKLANAIHEKQIEEIKYELIDQFGKLPDFSKNLILIAKIRLIADKIGIKYIKSNNNIGIIEFNDYGSIN
type: DOMAIN
name: TRCF_C
description: Transcription-repair-coupling factor, C-terminal domain

phrase: DLHVSSLLPSSYILDINTRLFFYKKLANAIHEKQIEEIKYELIDQFGKLPDFSKNLILIAKIRLIADKIGIKYIKSNNNIGIIEFNDYGSINTEYLLK
type: DOMAIN
name: TRCF_C
description: Transcription-repair-coupling factor, C-terminal domain

phrase: LREISRGGQVYYIYNKVQNIMNIAERLSILIPEASIKIGHGQMKNIDLKKVMNEFYNNKFNVLICTTIIESGVDIARANTIIIENSDHFGLSQLHQLRGRIGR
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: MNIAERLSILIPEASIKIGHGQMKNIDLKKVMNEFYNNKFNVLICTTIIESGVDIARANTIIIENSDHFGLSQLHQLRGRIGRS
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: YLYSFSGKIIFSLTEEKSLKKILRFLMRHKIHPQYIKRIIDIKKEIDYFYMIEEIKNGFIDKKNNILFLCTKD
type: DOMAIN
name: MFD_D3
description: Transcription-repair-coupling factor, D3 domain

phrase: QLILNHPVMHIEHGIGRYKGLTTIETASIQSEYLVISYAEGDKLYVPVSNLHLVSPYTGTSIENAPLHKLGGDDWNKEKHKISKTVYDHAAQLLHIY
type: DOMAIN
name: CarD-like/TRCF_RID
description: CarD-like/TRCF, RNAP-interacting domain

phrase: SDQNEVMKFVLKDMSKPIPMDRLICGDVGFGKTEIAMRASFLAVSNKKQVAILVPTTLLAQQHYKNFKIRFSNWPVNINILSRFQTQKEQDLIFKHTKNGRINIIIGTHKLLFKNIEWCSLGLLIIDEEHRFGVSHKEIIKKIYSNIDILTLTATPIPRTL
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain
Protein sequence:
MTLRIAITPGEPAGIGPDLLLKLAQQTWDAQLVAIADANMLKQRAKHLGLSIKLIEFDQHAAATPAPAGSLYLHQVDVAEPVELGVLNDANGQYVLDTLRIASEKNMDGTFAAVVTGPVHKGIINKAGISFSGHTEYFAQQSNTADVVMMLATQGLRVALVTTHIPLAYVSRAITEDRLIKVASILNHDLQTKFGIEKPRILVCGLNPHAGEDGHLGREEIDTIIPTLEILNNQGMNLIGPLPADTLFQDKYLNEADAVLAMYHDQGLPVLKYKGFGNSVNITLGLPFIRTSVDHGTALDLAGKGTADVGSFELAIREAIKLAQEKAQNQ

Annotated regions:
Protein sequence:
MTTNNPHNHPTGTTHFGFRTVAEEDKVALVRDVFDSVAGKYDLMNDLMSVGIHRLWKSTFLDMLRPRPDQVLLDVGGGTGDIAFGWKKRGGGKVTVCDINREMLAVGRDRAVDRNLSSGVTWVCGNAESLPIPDRSVDRYTIAFCLRNVTHWENAIAEAYRVLKPGGRFMCLEFSHVIVPGLKQAYDAYSFNVLPRVGELVTGNRDAYQYLVESIRKFPPQGELAAMIGDAGFERVTVRNLSAGIAAIHSGWRV

Annotated regions:
phrase: YDLMNDLMSVGIHRL
type: CONSERVED_SITE
name: UbiE/COQ5_MeTrFase_CS
description: UbiE/COQ5 methyltransferase, conserved site

phrase: RVLKPGGRFMCLEF
type: CONSERVED_SITE
name: UbiE/COQ5_MeTrFase_CS
description: UbiE/COQ5 methyltransferase, conserved site
Protein sequence:
MSRAILQVMIRGRVQGVGYRAWVEYQATASGLEGWVRNRRDGSVEALFAGAPNHVADMVALCRHGPPSSRVDSVTSETAGADELNLRRAGEKFSVLPTV

Annotated regions:
phrase: QVMIRGRVQGVGYRAWVEYQATASGLEGWVRNRRDGSVEALFAGAPNHVADMVALCRHGPPSSRVDSVTSETA
type: DOMAIN
name: Acylphosphatase-like_dom
description: Acylphosphatase-like domain

phrase: GWVRNRRDGSVEALFA
type: CONSERVED_SITE
name: Acylphosphatase_CS
description: Acylphosphatase, conserved site

phrase: ILQVMIRGRVQGVGYRAWVEYQATASGLEGWVRNRRDGSVEALFAGAPNHVADMVALCRHGPPSSRVDSVTSETAGADELNLRRAGEKFSVL
type: DOMAIN
name: Acylphosphatase-like_dom
description: Acylphosphatase-like domain
Protein sequence:
MVAPSQTGSRVPERIQSGFMSSSSNTAPSAGQSDAETTHFGFSTVAETDKAGLVRQVFDSVAGRYDLMNDVMSAGVHRLWKASLIDSLRPRTGERLLDVAGGTGDIAFRAMAAARRAGDNRQPHRPDLRVTVCDINAEMLRVGAARAESRGCGDIDFVCGDAEALPFPDRSFDAYTIAFGIRNVTRIDAALEEAFRVLKPGGRFFCLEFSPAVVPALKAAYDRYSFSVIPRLGGWITGDRDSYRYLVESIRRFPAPERFAAMIGAAGFDRVKVRGMSMGVVALHGGVRL

Annotated regions:
phrase: YDLMNDVMSAGVHRL
type: CONSERVED_SITE
name: UbiE/COQ5_MeTrFase_CS
description: UbiE/COQ5 methyltransferase, conserved site

phrase: RVLKPGGRFFCLEF
type: CONSERVED_SITE
name: UbiE/COQ5_MeTrFase_CS
description: UbiE/COQ5 methyltransferase, conserved site
Protein sequence:
MTNIRKTHPLMKIVNSSFIDLPAPSNISSWWNFGSLLGICLIMQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGLYYGSYMYLETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIVAALAGVHLLFLHETGSNNPSGLNSDTDKIPFHPYYTIKDILGALIMISMLSSLVLFSPDMXGDPDNXXXXNPLNTPPHIKPEWYFLFAXAILRSIPNKLGGVLALVLSILILMIIPLLHTAKQRSMMFRPMSQCMFWILVADLLTLTWIGGQPVEYPFVVIGXLASVIYFLIILFIMPITSMIENQLLKW

Annotated regions:
phrase: IDLPAPSNISSWWNFGSLLGICLIMQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGLYYGSYMYLETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIVAALAGVHLLFLHET
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: NPLNTPPHIKPEWYFLFAXAILRSIPNKLGGVLALVLSILILMIIPLLHTAKQRSMMFRPMSQCMFWILVADLLTLTWIGGQPVEYPFVVIGXLASVIY
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: PLMKIVNSSFIDLPAPSNISSWWNFGSLLGICLIMQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGLYYGSYMYLETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIVAALAGVHLLFLHETGS
type: DOMAIN
name: Cytochrome_b_N_euk/bac
description: Cytochrome b/b6, N-terminal domain, eukaryotic/bacterial

phrase: GLNSDTDKIPFHPYYTIKDILGALIMISMLSSLVLFSPDMXGDPDNXXXXNPLNTPPHIKPEWYFLFAXAILRSIPNKLGGVLALVLSILILMIIPLLHTAKQRSMMFRPMSQCMFWILVADLLTLTWIGGQPVEYPFVVIGXLASVIYFLIILFIMPITSMIENQLLK
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: NPSGLNSDTDKIPFHPYYTIKDILGALIMISMLSSLVLFSPDMXGDPDNXXXXNPLNTPPHIKPEWYFLFAXAILRSIPNKLGGVLALVLSILILMIIPLLHTAKQRSMMFRPMSQCMFWILVADLLTLTWIGGQPVEYPFVVIGXL
type: DOMAIN
name: Cytochrome_b_C_euk/bac
description: Cytochrome b/b6, C-terminal domain, eukaryotic/bacterial

phrase: MTNIRKTHPLMKIVNSSFIDLPAPSNISSWWNFGSLLGICLIMQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGLYYGSYMYLETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIVAALAGVHLLFLHETGSNNP
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain
Protein sequence:
MKYELVSTDGRARRGRLIFERGVVETPAFMPVGTYGTVKGMTPEEVAQTGAQILLGNTFHLWLRPGQEIMKLHGDLHDFMQWPGPILTDSGGFQVFSLGAMRKIKEEGVYFRNPINGSPVFLSPEKSMEIQYDLGSDIVMIFDECTPYPADWDYAKRSMEMSLRWAKRSRQRFDELGNQNALFGIIQGSVYEDLRDVSLKGLVEIGFDGYAVGGLAVGEPKEDMHRILEHVCPMIPQDKPRYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGHLFVTGGVVKIRNAQYKEDTTALDPECDCYTCRNYSRAYLHHLDRCNEILGARLNTIHNLRYYQRLMAALRQAIEEGKLERFAADFYGRRGRTVPPLGAADAAS

Annotated regions:
phrase: RARRGRLIFERGVVETPAFMPVGTYGTVKGMTPEEVAQTGAQILLGNTFHLWLRPGQEIMKLHGDLHDFMQWPGPILTDSGGFQVFSLGAMRKIKEEGVYFRNPINGSPVFLSPEKSMEIQYDLGSDIVMIFDECTPYPADWDYAKRSMEMSLRWAKRSRQRFDELGNQNALFGIIQGSVYEDLRDVSLKGLVEIGFDGYAVGGLAVGEPKEDMHRILEHVCPMIPQDKPRYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGHLFVTGGVVKIRNAQYKEDTTALDPECDCYTCRNYSRAYLHHLDRCNEILGARLNTIHNLRYYQRLMAALRQAIEEGKLERFAADFYGR
type: DOMAIN
name: tRNA_ribo_trans-like
description: tRNA-guanine(15) transglycosylase-like

phrase: YELVSTDGRARRGRLIFERGVVETPAFMPVGTYGTVKGMTPEEVAQTGAQILLGNTFHLWLRPGQEIMKLHGDLHDFMQWPGPILTDSGGFQVFSLGAMRKIKEEGVYFRNPINGSPVFLSPEKSMEIQYDLGSDIVMIFDECTPYPADWDYAKRSMEMSLRWAKRSRQRFDELGNQNALFGIIQGSVYEDLRDVSLKGLVEIGFDGYAVGGLAVGEPKEDMHRILEHVCPMIPQDKPRYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGHLFVTGGVVKIRNAQYKEDTTALDPECDCYTCRNYSRAYLHHLDRCNEILGARLNTIHNLRYYQRLMAALRQAIEEGKLERFAADFYGRRG
type: DOMAIN
name: tRNA_ribo_trans-like
description: tRNA-guanine(15) transglycosylase-like
Protein sequence:
MRRKIIAGNWKMNGDQDLVRRVAERAADSAGDAELAVCPPYPLLAAAASQLPFGVALGAQDVSEYDSGAYTGEVSASMLLEAGCRYVIVGHSERRTLYGEDNGRVAGKFVAARNAGLTPILCVGETLAERDAERTESVVGEQLDAVMDAVGGATFQGAVIAYEPVWAIGTGRTATPEQAQAVHAFIRQRVQERDAGEIADQLPILYGGSMKADNAAELLAQPDIDGGLIGGASLDPDSFLSIYNAAAEG

Annotated regions:
phrase: AYEPVWAIGT
type: ACTIVE_SITE
name: Triosephosphate_isomerase_AS
description: Triosephosphate isomerase, active site
Protein sequence:
MTKYVFVTGGVVSSLGKGIAAASLGAILESRGLKVTMLKLDPYINVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFISARMRKVNNFTTGQIYESVLKKERRGDYLGKTVQVIPHITNEIQDFIVRGANAAWGAETDIAICEIGGTVGDIESLPFLEAARQMSLRLGRGQCAFVHLTLVPYIPSAGELKTKPTQHSVQKLREIGLYPDALLCRADRPIPDDERAKISMFSNVPLDAVISVWDVDSIYKIPAMLHQQGLDEIICETLGLHPPAADLTVWERLTAARENPGAEVHIGMVGKYVDLTESYKSLTEALIHAGIHTNSKVVVDYIDSEDIEANGCAGLEKFDAILVPGGFGKRGTEGKIQAIRYARENGVPFLGICLGMQLAVVEYARDVAGLTGANSTEFEPEALHPVVALITEWQDREGRVERRDSSSDLGGTMRKGAQRVPVKAGTRAHAIYGNEVNERHRHRYEVNNLYAPKLEAAGMVISARTPTENLPEIMELDSHPWFMGVQFHPEFTSTPRDGHPLFSSYVRAAKEFSKKRNGEKG

Annotated regions:
phrase: KYVFVTGGVVSSLGKGIAAASLGAILESRGLKVTMLKLDPYINVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFISARMRKVNNFTTGQIYESVLKKERRGDYLGKTVQVIPHITNEIQDFIVRGANAAWGAETDIAICEIGGTVGDIESLPFLEAARQMSLRLGRGQCAFVHLTLVPYIPSAGELKTKPTQHSVQKLREIGLYPDALLCRADRPIPDDERAKISMFSNVPLDAVISVWDVDSIYKIPAMLHQQGLDEIIC
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: KYVFVTGGVVSSLGKGIAAASLGAILESRGLKVTMLKLDPYINVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFISARMRKVNNFTTGQIYESVLKKERRGDYLGKTVQVIPHITNEIQDFIVRGANAAWGAETDIAICEIGGTVGDIESLPFLEAARQMSLRLGRGQCAFVHLTLVPYIPSAGELKTKPTQHSVQKLREIGLYPDALLCRADRPIPDDERAKISMFSNVPLDAVISVWDVDSIYKIPAMLHQQGLDEIICETLG
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: VHIGMVGKYVDLTESYKSLTEALIHAGIHTNSKVVVDYIDSEDIEANGCAGLEKFDAILVPGGFGKRGTEGKIQAIRYARENGVPFLGICLGMQLAVVEYARDVAGLTGANSTEFEPEALHPVVALITEWQDREGRVERRDSSSDLGGTMRKGAQRVPVKAGTRAHAIYGNEVNERHRHRYEVNNLYAPKLEAAGMVISARTPTENLPEIMELDSHPWFMGVQFHPEFTSTPRDGHPLFSSY
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain

phrase: TESYKSLTEALIHAGIHTNSKVVVDYIDSEDIEANGCAGLEKFDAILVPGGFGKRGTEGKIQAIRYARENGVPFLGICLGMQLAVVEYARDVAGLTGANSTEFEPEALHPVVALITEWQDREGRVERRDSSSDLGGTMRKGAQRVPVKAGTRAHAIYGNEVNERHRHRYEVNNLYAPKLEAAGMVISARTPTENLPEIMELDSHPWFMGVQFHPEFTSTPRDGHPLFSSYV
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase
Protein sequence:
MTYETSLTFARQLDQNDPLRLFRDRFHIPQRDGQPLTYLCGNSLGLQPTTARAALEQELTTWQNLGVEGWFEVPEGAEHTWLGYHNTCKEALAQIVGADRGEVCPMNALTVNLHLLLASFYQPTGRKYKILTIKGDFPSDQYALETHVKLRNPGMGSLVDAIIEVAPRPDDHLIHTTDIQAAIAEHADELAVIWMSGLNYYTGQVYNMAAIAETARRHCVSIGFDLAHAIGNVPLRLHDWGVDFATWCSYKYLNGGPGAVSGVFIHQKHHEQNLPRLAGWWGYREDRRFEMTPGFLPAPGADGWQLSTPNIPALALHRASLAITAEAGMTALRQKSELLTSYLEYLLGGFGEVQILTPDDPNQRGCQLSLLVRKQGKALFRFLTEQGIIGDWREPDCIRLAPAPLYNTFEDVWRVGDALSRFFGQA

Annotated regions:
Protein sequence:
MSVLKVESAYRSDDIRAAEGPVLARLGGSALMDRAAARLAVVCVEVLRETGGVNGRRVVLLVGSGNNAGDALLAGARLRQRGAKVTAVLINKTTHQRGLTTLRSRGGCVIDATNTDAVESILNALADAELVVDGIVGISGKTGLRAPADQLVNAVPSGTPVVAVDLPSGVDPDTGETDGQHVVADVTVTFGAMKPCLMLPPAAYATGRVVYVDVGITGELRGEPAVERLTPAGVAARWPLPAHTAHKYSRGVLGVIAGSDKYPGAAVLAVGGAFETGLGALWYVGPRRASDQVLTAFPETMHGKGRVQAWLLGSGVESDPNQDRAVDEALESGLPCVVDAGALAACVRHRSSGKRAATTAEQVLLTPHAGELARMFNQIGHEVSREEVEARPAYHGRWLAGELEVTVLVKGPTTLVVPPTGPVGSVSEAPAWLATAGAGDVLAGIAGALMAAGVDAYNAGQMAAFVHGRAAALASNGGPIRSGRVIGAIAPVIAELLEA

Annotated regions:
phrase: TPAGVAARWPLPAHTAHKYSRGVLGVIAGSDKYPGAAVLAVGGAFETGLGALWYVGPRRASDQVLTAFPETMHGKGRVQAWLLGSGVESDPNQDRAVDEALESGLPCVVDAGALAACVRHRSSGKRAATTAEQVLLTPHAGELARMFNQIGHEVSREEVEARPAYHGRWLAGELEVTVLVKGPTTLVVPPTGPVGSVSEAPAWLATAGAGDVLAGIAGALMAAGVDAYNAGQMAAFVHGRAAALASNGGPIRSGRVIGAIAPVIAE
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: ALMDRAAARLAVVCVEVLRETGGVNGRRVVLLVGSGNNAGDALLAGARLRQRGAKVTAVLINKTTHQRGLTTLRSRGGCVIDATNTDAVESILNALADAELVVDGIVGISGKTGLRAPADQLVNAVPSGTPVVAVDLPSGVDPDTGETDGQHVVADVTVTFGAMKP
type: DOMAIN
name: YjeF_N_dom
description: YjeF N-terminal domain

phrase: SALMDRAAARLAVVCVEVLRETGGVNGRRVVLLVGSGNNAGDALLAGARLRQRGAKVTAVLINKTTHQRGLTTLRSRGGCVIDATNTDAVESILNALADAELVVDGIVGISGKTGLRAPADQLVNAVPSGTPVVAVDLPSGVDPDTGETDGQHVVADVTVTFGAMKPCLMLPPAAYATGRVVYVDVG
type: DOMAIN
name: YjeF_N_dom
description: YjeF N-terminal domain

phrase: YRSDDIRAAEGPVLARLGGSALMDRAAARLAVVCVEVLRETGGVNGRRVVLLVGSGNNAGDALLAGARLRQRGAKVTAVLINKTTHQRGLTTLRSRGGCVIDATNTDAVESILNALADAELVVDGIVGISGKTGLRAPADQLVNAVPSGTPVVAVDLPSGVDPDTGETDGQHVVADVTVTFGAMKPCLMLPPAAYATGRVVYVDVGITGELR
type: DOMAIN
name: YjeF_N_dom
description: YjeF N-terminal domain

phrase: VESAYRSDDIRAAEGPVLARLGGSALMDRAAARLAVVCVEVLRETGGVNGRRVVLLVGSGNNAGDALLAGARLRQRGAKVTAVLINKTTHQRGLTTLRSRGGCVIDATNTDAVESILNALADAELVVDGIVGISGKTGLRAPADQLVNAVPSGTPVVAVDLPSGVDPDTGETDGQHVVADVTVTFGAMKPCLMLPPAAYATGRVVYVDVGI
type: DOMAIN
name: YjeF_N_dom
description: YjeF N-terminal domain

phrase: TPAGVAARWPLPAHTAHKYSRGVLGVIAGSDKYPGAAVLAVGGAFETGLGALWYVGPRRASDQVLTAFPETMHGKGRVQAWLLGSGVESDPNQDRAVDEALESGLPCVVDAGALAACVRHRSSGKRAATTAEQVLLTPHAGELARMFNQIGHEVSREEVEARPAYHGRWLAGELEVTVLVKGPTTLVVPPTGPVGSVSEAPAWLATAGAGDVLAGIAGALMAAGVDAYNAGQMAAFVHGRAAALASNGGPIRSGRVIGAIAPVIAELL
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: TAHKYSRGVLGVIAGSDKYPGAAVLAVGGAFETGLGALWYVGPRRASDQVLTAFPETMHGKGRVQAWLLGSGVESDPNQDRAVDEALESGLPCVVDAGALAACVRHRSSGKRAATTAEQVLLTPHAGELARMFNQIGHEVSREEVEARPAYHGRWLAGELEVTVLVKGPTTLVVPPTGPVGSVSEAPAWLATAGAGDVLAGIAGALMAAGVDAYNAGQMAAFVHGRAAALASNG
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: GVIAGSDKYPGAAVLAVGGAFETGLGALWYVGPRRASDQVLTAFPETMHGKGRVQAWLLGSGVESDPNQDRAVDEALESGLPCVVDAGALAACVRHRSSGKRAATTAEQVLLTPHAGELARMFNQIGHEVSREEVEARPAYHGRWLAGELEVTVLVKGPTTLVVPPTGPVGSVSEAPAWLATAGAGDVLAGIAGALMAAGVDAYNAGQMAAFVHGRAAALAS
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase
Protein sequence:
MQLQASRQTPGAPRPALYDLTFDELRALLTSWGEPEYRARQLWAWLYKRLPASFDEMTDLPARLRQRLAAETVLHRLRVVAERESSDGGTRKLLLELPDGQRIESVLMGYERRRTACISTQAGCGMGCVFCATGQMGLLRNLTSGEIVEQVLFIERELRQGTPPLVGEGPGEGSERGLTNIVLMGMGEPLANYGPTLAALRRLIDPTGFNFGQRRITLSTVGLVPAIERFSREGLQVGLAVSLHAATDELRNELVPINRRYPLAQLLAACRNYVARTGRRITFEWALIRDVNDTPEQARALVRLISGLLCHVNVIPLNPTRGYAGAPSTRERVAAFREILERAGIPCTVRVRRGIDIQAGCGQLRTEVEAARGGGQPGDGHRA

Annotated regions:
phrase: YERRRTACISTQAGCGMGCVFCATGQMGLLRNLTSGEIVEQVLFIERELRQGTPPLVGEGPGEGSERGLTNIVLMGMGEPLANYGPTLAALRRLIDPTGFNFGQRRITLSTVGLVPAIERFSREGLQVGLAVSLHAATDELRNELVPINRRYPLAQLLAACRNYVARTGRRITFEWALIRDVNDTPEQARALVRLISGLLCHVNVIPLNPTRGYAGAPSTRERVAAFREILERAGIPCTVRVRRGI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: ISTQAGCGMGCVFCATGQMGLLRNLTSGEIVEQVLFIERELRQGTPPLVGEGPGEGSERGLTNIVLMGMGEPLANYGPTLAALRRLIDPTGFNFGQRRITLSTVGLVPAIERFSREGLQVGLAVSLHAATDELRNELVPINRRYPLAQLLAACRNYVARTGRRITFEWALIRDVND
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LYDLTFDELRALLTSWGEPEYRARQLWAWLYKRLPASFDEMTDLPARLRQRLAAE
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MDNIQTFIKESDDFKSIINGLHEGLKEQLLAGLSGSARSVFTSALANETNKPIFLITHNLYQAQKVTDDLTSLLEDRSVLLYPVNELISSEIAVASPELRAQRLDVINRLTNGEAPIVVAPVAAIRRMLPPVEVWKSSQMLIQVGHDIEPDQLASRLVEVGYERSDMVSAPGEFSIRGGIIDIYPLTSENPVRIELFDTEVDSIRSFNSDDQRSIETLTSINIGPAKELIIRPEEKARAMEKIDSGLAASLKKLKADKQKEILHANISHDKERLSEGQTDQELVKYLSYFYEKPASLLDYTPDNTLLILDEVSRIHEMEEQLQKEEAEFITNLLEEGKILHDIRLSFSFQKIVAEQKRPLLYYSLFLRHVHHTSPQNIVNVSGRQMQSFHGQMNVLAGEMERFKKSNFTVVFLGANKERTQKLSSVLADYDIEAAMTDSKKALVQGQVYIMEGELQSGFELPLMKLAVITEEELFKNRVKKKPRKQKLTNAERIKSYSELQIGDYVVHINHGIGKYLGIETLEINGIHKDYLNIHYQGSDKLYVPVEQIDQVQKYVGSEGKEPKLYKLGGSEWKRVKKKVETSVQDIADDLIKLYAEREASKGYAFSPDHEMQREFESAFPYQETEDQLRSIHEIKKDMERERPMDRLLCGDVGYGKTEVAIRAAFKAIGDGKQVALLVPTTILAQQHYETIKERFQDYPINIGLLSRFRTRKEANETIKGLKNGTVDIVIGTHRLLSKDVVYKDLGLLIIDEEQRFGVTHKEKIKQI

Annotated regions:
phrase: DMERERPMDRLLCGDVGYGKTEVAIRAAFKAIGDGKQVALLVPTTILAQQHYETIKERFQDYPINIGLLSRFRTRKEANETIKGLKNGTVDIVIGTHRLLSKDVVYKDLGLLIIDEEQRFGVTHKEKIKQ
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: TEDQLRSIHEIKKDMERERPMDRLLCGDVGYGKTEVAIRAAFKAIGDGKQVALLVPTTILAQQHYETIKERFQDYPINIGLLSRFRTRKEANETIKGLKNGTVDIVIGTHRLLSKDVVYKDLGLLIIDEEQRFGVTHKEKIKQ
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: IQVGHDIEPDQLASRLVEVGYERSDMVSAPGEFSIRGGIIDIYPLTSENPVRIELFDTEVDSIRSFNSDDQRSIETLTSINIGPAK
type: DOMAIN
name: UvrB_inter
description: UvrB, interaction domain

phrase: LQIGDYVVHINHGIGKYLGIETLEINGIHKDYLNIHYQGSDKLYVPVEQIDQVQKY
type: DOMAIN
name: CarD-like/TRCF_RID
description: CarD-like/TRCF, RNAP-interacting domain

phrase: FPYQETEDQLRSIHEIKKDMERERPMDRLLCGDVGYGKTEVAIRAAFKAIGDGKQVALLVPTTILAQQHYETIKERFQDYPINIGLLSRFRTRKEANETIKGLKNGTVDIVIGTHRLLSKDVVYKDLGLLIIDEEQRFGVTHKEKIKQ
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: ELQIGDYVVHINHGIGKYLGIETLEINGIHKDYLNIHYQGSDKLYVPVEQIDQVQKYVGSEGKEPKLYKLGGSEWKRVKKKVETSVQDIADDLIKLY
type: DOMAIN
name: CarD-like/TRCF_RID
description: CarD-like/TRCF, RNAP-interacting domain

phrase: FTVVFLGANKERTQKLSSVLADYDIEAAMTDSKKALVQGQVYIMEGELQSGFELPLMKLAVITEEE
type: DOMAIN
name: MFD_D3
description: Transcription-repair-coupling factor, D3 domain
Protein sequence:
MPLSTIPAALEDLRAGKMIILVDDPGRENEGDVAMLAEHVTPEAINFMAKEARGLICMPMGEALCDQLDLPPQAHENQSRMGTAFTVSIEAREGVTTGISAADRAHTIKVAAAEGASATDLARPGHIFPLRAKDGGVLVRGGQTEGIVDLARLAGGRPAGVICEVMKDDGTMARMPDLEVFAKQHDLRIVTIADLIAYRRQTERLIEAVEMDTPLPTRFGNFRAHLFRSKLDGREHVALTTEAMPGPGLDGPREAVDEVVTVRVHSECLTGDVFHSLRCDCGTQLDQALQTLAAQKYGVLVYMRQEGRGIGLAAKLKAYRLQDEGMDTVEANQALGYAADLREYGLGAQMLTYLGVRRMRLLTNNPKKIAGLEGYGLSVEDQVPLKTEPNSFNTRYLQTKRDKLGHLLGEIKETLG

Annotated regions:
phrase: DTPLPTRFGNFRAHLFRSKLDGREHVALTTEAMPGPGLDGPREAVDEVVTVRVHSECLTGDVFHSLRCDCGTQLDQALQTLAAQKYGVLVYMRQEGRGIGLAAKLKAYRLQDEGMDTVEANQALGYAADLREYGLGAQMLTYLGVRRMRLLTNNPKKIAGLEGYGLSVEDQV
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MDYLPLFFDLKKRHALLIGGGDVALRKARLLVRAGAQVRVISHEVHAELRELVELHEGQVLIGEYHPGLLDGVALVIAATDDETLNERVHYDAVERLLPVNVVDNPPLCTFVFPAIVDRSPIVIGISSGGQSPVLARMLRAKLETLIPSGYSRLGQLVGGFRERVKARFSSVNDRRKFWEKILQGEVAERVFAGRDEEAAQLLENELNADQGEPGVGEVYLVGAGPGDPELLTFKALRLMQQADVVLYDRLVSPQVLDLCRRDADLIYVGKARDNHSVPQQGINALLVEHALKGRRVVRLKGGDPFIFGRGGEEIEELKAQGIPFQVVPGITAASACSTYAGIPLTHRDYAQSVKFVTGQLKNRTSDLKFDELVHPNQTIVFYMGLHTLDKLCEGLMEKGKPGDTPVAIVSQGTSAEQRVLTGRLDDIVERQREAQLPAPAIVILGEVVELQSKLAWFGQTEGAQADA

Annotated regions:
phrase: IGISSGGQSPVLARMLRAKL
type: DOMAIN
name: Sirohaem_synthase_central
description: Siroheme synthase, central domain

phrase: VGAGPGDPELLTFKALRLMQQADVVLYDRLVSPQVLDLCRRDADLIYVGKARDNHSVPQQGINALLVEHALKGRRVVRLKGGDPFIFGRGGEEIEELKAQGIPFQVVPGITAASACSTYAGIPLTHRDYAQSVKFVTGQLKNRTSDLKFDELVHPNQTIVFYMGLHTLDKLCEGLMEKGKPGDTPVAIVSQGTSAEQRVLTGRLDDIVERQREAQLPAPAIVILGEV
type: DOMAIN
name: CobA/CysG_C
description: Uroporphyrin-III C-methyltransferase

phrase: VYLVGAGPGDPELLTFKALRLMQQADVVLYDRLVSPQVLDLCRRDADLIYVGKARDNHSVPQQGINALLVEHALKGRRVVRLKGGDPFIFGRGGEEIEELKAQGIPFQVVPGITAASACSTYAGIPLTHRDYAQSVKFVTGQLKNRTSDLKFDELVHPNQTIVFYMGLHTLDKLCEGLMEKGKPGDTPVAIVSQGTSAEQRVLTGRLDD
type: DOMAIN
name: 4pyrrol_Mease
description: Tetrapyrrole methylase

phrase: VVRLKGGDPFIFGRGGEEIEELKAQGIPFQVVP
type: CONSERVED_SITE
name: Uropor_MeTrfase_CS
description: Uroporphiryn-III C-methyltransferase, conserved site

phrase: LPLFFDLKKRHALLIGGGDVALRKARLLVRAGAQVRVISHEVHAELRELVELHEGQVLIGEYHPGLLDGVALVIAATDDETLNERVHYDAVERLLPVNVVDNPPLCTFVFPAIVDRSPIVIGISSGGQSPVLARMLRAKLETLIPSGYSRLGQLVGGFRERVKARFSSVNDRRKFWEKILQGEVAERVFAGRDEEAAQLLENE
type: DOMAIN
name: Sirohaem_synthase_N
description: Sirohaem synthase, N-terminal

phrase: GEVYLVGAGPGDPELLTFKALRLMQQADVVLYDRLVSPQVLDLCRRDADLIYVGKARDNHSVPQQGINALLVEHALKGRRVVRLKGGDPFIFGRGGEEIEELKAQGIPFQVVPGITAASACSTYAGIPLTHRDYAQSVKFVTGQLKNRTSDLKFDELVHPNQTIVFYMGLHTLDKLCEGLMEKGKPGDTPVAIVSQGTSAEQRVLTGRLDDIVERQREAQLPAPAIVILGEVVEL
type: DOMAIN
name: CobA/CysG_C
description: Uroporphyrin-III C-methyltransferase

phrase: GYSRLGQLVGGFRERVKARFSSVNDRRKFWEKILQGEVAERVFAGRDEEAAQLLENE
type: DOMAIN
name: Sirohaem_synthase_dimer_dom
description: Sirohaem synthase, dimerisation domain
Protein sequence:
MGDNALDLATASSTPIPMPNTGQLVISPQDIGYSDPPKLRGRLKLEFVHDISLDANVEDPIALIPHGIWSIFKSKLAQMRCPKGYITYDKVILSWKPHVATGLARGQIAVVDTRVNHTSIEDLMHKALWKTAPVDLGCTYTIQGTVPYCLPFHPKEGGDVKSDLESQNPIRGIVYITDSRYQEAARHGALTMTLKLSIGTMPTDALTGPRATLSQPHLRDNLRSRSQRISRPPIGITQRPRRSLAEPPLEKEEEQESTLSSEASGSEQGLIIPVQGPSTSSRSRRVRG

Annotated regions:
Protein sequence:
MWLPTPLGPLWLEVSPLGVRRLEPALYPRGPEAEGALALRVREAVQAYFAGERPDFLDLPLDYTGLSPARLRLYERVRLVPYGRTVSYGALGRELGLSPRAVGAALRACPFFLLVPAHRVIHADGRLGGFQGQEGLKLWLLRFEGAL

Annotated regions:
phrase: RLRLYERVRLVPYGRTVSYGALGRELGLSPRAVGAALRACPFFLLVPAHRVIHADGRLGGFQGQEGLKLWLLRFE
type: DOMAIN
name: MethylDNA_cys_MeTrfase_DNA-bd
description: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding

phrase: RLRLYERVRLVPYGRTVSYGALGRELGLSPRAVGAALRACPFFLLVPAHRVIHADGRLGGFQGQEGLKLWLLRF
type: DOMAIN
name: MethylDNA_cys_MeTrfase_DNA-bd
description: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding

phrase: LRLYERVRLVPYGRTVSYGALGRELGLSPRAVGAALRACPFFLLVPAHRVIHADGRLGGFQGQEGLKLWLLRFE
type: DOMAIN
name: MethylDNA_cys_MeTrfase_DNA-bd
description: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding
Protein sequence:
MFAFLRGELVTVSREEAVVEVSGIGYLLHISSGTSRRLPPEGSQVRLFTHHYVREDAQQLFGFLDEEELQLFRLLLTIGGVGPKLAMAVLSGLSVGEIQEAIVANRPETLYGITGVGKKTASRIILELRDKILKIQPAASGKTAGAPQALQLNEDALAALMTLGFPKPAAQKAISGILETSPGLSVEEVVRAALIAIHNNF

Annotated regions:
phrase: RLLLTIGGVGPKLAMAVLS
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: ETLYGITGVGKKTASRIIL
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: NEDALAALMTLGFPKPAAQKAISGILETSPGLSVEEVVRAALIA
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal

phrase: MFAFLRGELVTVSREEAVVEVSGIGYLLHISSGTSRRLPPEGSQVRLFTHHYVREDAQQLF
type: DOMAIN
name: DNA_helicase_Holl-junc_RuvA_I
description: DNA helicase, Holliday junction RuvA type, domain I, bacterial

phrase: EDALAALMTLGFPKPAAQKAISGILETSPGLSVEEVVRAA
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal