nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MRLSSNWSKLQDGVTKKAGKKRIDKKPHIIKKVGQDKKPKSKIMGMIYQMNKEIDQQKENKKVGKKFEFTETITEIDTVETTTETKKDANKIGKYIAMDCEFVGVGPEGKDSALARVSLVNFHGNVVLDIFVKPRETVTDWRTWVSGITPDHMKNAVSFKQAQQQLSDILKDKILVGHAVKHDLEALMLSHPKSKVIDTARHLPFRQKYAKGKSPSLKKLAKEILNMDIQSGQHSSVEDARATMLIYKSAKQDFDKEHRKKFH

Annotated regions:
phrase: IAMDCEFVGVGPEGKDSALARVSLVNFHGNVVLDIFVKPRETVTDWRTWVSGITPDHMKNAVSFKQAQQQLSDILKDKILVGHAVKHDLEALMLSHPKSKVIDTARHLPFRQKYAKGKSPSLKKLAKEILNMDIQSGQHSSVEDARATMLIY
type: DOMAIN
name: REX4_DEDDh_dom
description: RNA exonuclease 4, DEDDh 3'-5' exonuclease domain

phrase: KYIAMDCEFVGVGPEGKDSALARVSLVNFHGNVVLDIFVKPRETVTDWRTWVSGITPDHMKNAVSFKQAQQQLSDILKDKILVGHAVKHDLEALMLSHPKSKVIDTARHLPFRQKYAKGKSPSLKKLAKEILNMDIQSGQHSSVEDARATMLIYKSAKQDFD
type: DOMAIN
name: Exonuclease_RNaseT/DNA_pol3
description: Exonuclease, RNase T/DNA polymerase III

phrase: IAMDCEFVGVGPEGKDSALARVSLVNFHGNVVLDIFVKPRETVTDWRTWVSGITPDHMKNAVSFKQAQQQLSDILKDKILVGHAVKHDLEALMLSHPKSKVIDTARHLPFRQKYAKGKSPSLKKLAKEILNMDIQSGQHSSVEDARATMLI
type: DOMAIN
name: Exonuclease_RNaseT/DNA_pol3
description: Exonuclease, RNase T/DNA polymerase III
Protein sequence:
MSDITVANYHAFPDARGHFGRYGGRFVAETLIGPLQELAQAYDAARHDPDFIAAYNKDLKDYVGRPSPIYHAERLSRKVGGAQILLKREDLNHTGAHKINNTIGQALLAARMGKTRIIAETGAGQHGVASATVAARLGLECVVYMGATDIQRQQINVYRMKLLGATVVPVTSGSATLKDALNEAMRDWVTHVGHTFYIIGTVAGPDPYPRMVRDFNAIVGREARAQMIEDYGRLPDAMTACVGGGSNAIGLFHAFLNDASVRIYGAEAAGDGIATGRHAASIVAGRPGVLHGNRTYVVCDDDGQILETHSVSAGLDYPGVGPEHAFLADSGRVQYVGIRDEEALAAFHLLAHTEGILAALESSHAVAHTMTLARDLPKDALVLCNLSGRGDKDVHTIAAREGVRV

Annotated regions:
phrase: GRPSPIYHAERLSRKVGGAQILLKREDLNHTGAHKINNTIGQALLAARMGKTRIIAETGAGQHGVASATVAARLGLECVVYMGATDIQRQQINVYRMKLLGATVVPVTSGSATLKDALNEAMRDWVTHVGHTFYIIGTVAGPDPYPRMVRDFNAIVGREARAQMIEDYGRLPDAMTACVGGGSNAIGLFHAFLNDASVRIYGAEAAGDGIATGRHAASIVAGRPGVLHGNRTYVVCDDDGQILETHSVSAGLDYPGVGPEHAFLADSGRVQYVGIRDEEALAAFHLLAHTEGILAALESSHAVAHTMTLARDLPKDALVLCNLS
type: DOMAIN
name: TrpB-like_PALP
description: Tryptophan synthase beta chain-like, PALP domain

phrase: LNHTGAHKINNTIG
type: CONSERVED_SITE
name: Trp_synth_b_CS
description: Tryptophan synthase, beta chain, conserved site
Protein sequence:
MSRELTVSLAAIASQALTFPQLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRNPLADHYACMDLLR

Annotated regions:
phrase: QRNLVTWNAMISGYTRIGDMSSARQLFDT
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: SVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISA
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: RDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTA
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: RNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSAC
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: NLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVV
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: NDSGYRSLIFMYARGGNLWEAKRVFDEMKE
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: VSWTVMITGFAKVKDLENARKYFDRMPEKSV
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: VSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPN
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: WNVMISGYWKWGNKEEACKLFDMMPENDV
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: VTWNAMISGYTRIGDMSSARQLFDTMPKRNV
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: YRSLIFMYARGGNLWEAKRVFDEMKERDV
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: VSYNTLFTAFAANGDGVETLNLLSKMKDEGIEP
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: VSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKP
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: SVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVR
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: DVVSWTVMITGFAKVKDLENARKYFDRMPE
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: WNVMISGYWKWGNKEEACKLFDMMPEN
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: NVIMDMYVKHESVESARKVFDQIS
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: DVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIE
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: KGSDWNVMISGYWKWGNKEEACKLFDMMPE
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat
Protein sequence:
MTNSHSADFKQQRIRVASQSSYEVVIDRGIDFATEEILKAAGATANYLIIHQPALADRAAELSKRLSAAGYAAHTHQIDDAESAKTAQSAAECWDVCAQVGLTRADTIIGLGGGAATDLAGFIAATWMRGIKVVHYPTTLLAMVDAAVGGKTGINTPAGKNLVGSFHEPSAVIVDLEVLETLPEAEMIAGSAEIVKAGFIADTEILGIYEADPQAALDPHGSLPELIARAIQVKADVVAVDLKESSLREILNYGHTYGHAVEHYEDYRWRHGQAVAVGMIFEAELAKAAGLLSEADVRRHRDILNSVGLATSYDGAELDELLAAMGRDKKNKGGKIRFVVLEQIGKPTRLEGPSEELLRAAYAASVGA

Annotated regions:
phrase: GSAEIVKAGFIADTEILGIYEADPQAALDPHGSLPELIARAIQVKADVVAVDLKESSLREILNYGHTYGHAVEHYEDYRWRHGQAVAVGMIFEAELAKAAGLLSEADVRRHRDILNSVGLATSYDGAELDELLAAMGRDKK
type: DOMAIN
name: DHQS_C
description: 3-dehydroquinate synthase, C-terminal domain

phrase: QIDDAESAKTAQSAAECWDVCAQVGLTRADTIIGLGGGAATDLAGFIAATWMRGIKVVHYPTTLLAMVDAAVGGKTGINTPAGKNLVGSFHEPSAVIVDLEVLETLPEAEM
type: DOMAIN
name: DHQS/DOIS_N
description: 3-dehydroquinate synthase, N-terminal domain
Protein sequence:
MALLLVSLLAFLSLGSGCHHQVCHYSNRVFLCQESKVTEIPSDLPRNALELRFVLTKLRVIPKGAFSGFGDLKKIEISQNDVLEVIEANVFSNLPKLHEIRIEKANNLLYIDHDAFQNLPNLQYLLISNTGIKHLPAVHKIQSLQKVLLDIQDNINIHIVERNSFMGLSFESMILRLSKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFQGASGPVILDISGTRIHSLPNYGLENLKKLRARSTYNLKKLPSLEKFVALMEASLTYPSHCCAFANWRQQTSELQTTCNKSILRQEVDMTQARGERVSLAEDDESMMYSEFDYDLCNEVVDVTCSPKPDAFNPCEDIMGYDILRVLIWFISILAITGNIIVLVILITSQYKLTVPRFLMCNLAFADLCIGIYLLLIASVDIHTKSQYHNYAIDWQTGAGCDAAGFFTVFGSELSVYTLTAITLERWHTITHAMQLECKVQLRHAASVMLVGWIFGFGVGLLPIFGISTYMKVSICLPMDIDSPLSQLYVMSLLVLNVLAFVVICGCYTHIYLTVRNPNIVSSSSDTKIAKRMGILIFTDFLCMAPISFFGISASLKVALITVSKSKILLVLFYPINSCANPFLYAIFTKNFRRDFFILLSKFGCYEMQAQTYRTETSSTGHISHPKNGPCPPTPRVTNGANCTLVPLSHLAQN

Annotated regions:
phrase: VERNSFMGLSFESMILRLSKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFQGASGPVILDISGTRIHSLPNYGLENLKKL
type: REPEAT
name: LRR_5
description: BspA-type LRR region

phrase: KLRVIPKGAFSGFGDLKKIEISQNDVLEVIEANVFSNLPKLHEIRIEKANNLLYIDHDAFQNLPNLQYLLISN
type: REPEAT
name: LRR_5
description: BspA-type LRR region

phrase: RQQTSELQTTCNKSILRQEVDMTQARGERVSLAEDDESMMYSEFDYDLCNEVVDVTCSP
type: DOMAIN
name: GnHR_TM
description: Gonadotropin hormone receptor, transmembrane domain

phrase: GNIIVLVILITSQYKLTVPRFLMCNLAFADLCIGIYLLLIASVDIHTKSQYHNYAIDWQTGAGCDAAGFFTVFGSELSVYTLTAITLERWHTITHAMQLECKVQLRHAASVMLVGWIFGFGVGLLPIFGISTYMKVSICLPMDIDSPLSQLYVMSLLVLNVLAFVVICGCYTHIYLTVRNPNIVSSSSDTKIAKRMGILIFTDFLCMAPISFFGISASLKVALITVSKSKILLVLFYPINSCANPFL
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM

phrase: QLDELNLSDNNNLEELPNDVFQ
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat
Protein sequence:
MFSSAHSGLLEKLFHYIDLHQDEFVQTLKEWVAIESDSVQPVPRLRQKLFQMMALAADKLRNLGAGVESIDLGSQQMPDGQSLPIPPILLAELGSDPEKPTVCFYGHLDVQPAQKDDGWLTDPYTLTEVDGKLYGRGATDNKGPVLAWINAVSTFRALQQDLPVNIKFILEGMEEAGSIALEELVMREKDHFFSSVDYIVISDNLWLSQRKPALTYGTRGNCYFTVEVKCRDQDFHSGTFGGILNEPMADLVALLGSLVDSSGHILIPGIYDQMAPITEGEKTMYKNIDMDLEEYQNINQVEKFLFDTKEELLMHLWRYPSLSIHGIEGAFDEPGTKTVIPGRVLGKFSIRLVPTMSPSVVEKQVTQHLEAVFSKRNSFNKMAVSMVLGLHPWTANVNDTQYLAAQRTIKTVFGVNPDMIRDGSTIPIAKIFQAITQKSVMMLPLGAVDDGEHSQNEKINRWNYIQGSKLFAAFFLELSKQHSGHQMPSSVY

Annotated regions:
phrase: ATDNKGPVLAWINAVSTFRALQQDLPVNIKFILEGMEEA
type: CONSERVED_SITE
name: ArgE/DapE_CS
description: ArgE/DapE/ACY1/CPG2/YscS, conserved site

phrase: YGTRGNCYFTVEVKCRDQDFHSGTFGGILNEPMADLVALLGSLVDSSGHILIPGIYDQMAPITEGEKTMYKNIDMDLEEYQNINQVEKFLFDTKEELLMHLWRYPSLSIHGIEGAFDEPGTKTVIPGRVLGKFSIRLVPTMSPSVVEKQVTQHLEAVF
type: DOMAIN
name: Peptidase_M20_dimer
description: Peptidase M20, dimerisation domain
Protein sequence:
MTPQIKTHLLPKQEPSSSENHGSSTSGIVFNVSTSIIGAGIMSMPAAFKVLGIVPAFLIITIIAWLSTISVGFLMKSTLAGESTTYAGVMKESFGKTGSIAVQIATMVATFGCMIIFSIIIGDVLSGNENGGPEHIGVLQEWFGSYWWNTRIFALLFVYGFVLLPLVLRRRVERLAISSAVSFLLAVLFVVISSVLAISALVNGQTKNPRLFPELSNGGSFWQLFTASPVIVTAFTFHFNVHPIGFELKDPLQVIPATKISVILCAAIYFATGLFGYLLFGDATMSDILVNFDQSSGSSIGSLLNDIVRLSYVLHLMLVFPLLNFSLRANLDELLYPKKPSLEKDTKRFIGLTLALLICCFLSAIAVPDIWYFFQFMGSTITVSIAFIFPAAIVLRNIHGVSTSREKIVAAIMLVLAVATSIIAISTNLYSLAAN

Annotated regions:
phrase: GSSTSGIVFNVSTSIIGAGIMSMPAAFKVLGIVPAFLIITIIAWLSTISVGFLMKSTLAGESTTYAGVMKESFGKTGSIAVQIATMVATFGCMIIFSIIIGDVLSGNENGGPEHIGVLQEWFGSYWWNTRIFALLFVYGFVLLPLVLRRRVERLAISSAVSFLLAVLFVVISSVLAISALVNGQTKNPRLFPELSNGGSFWQLFTASPVIVTAFTFHFNVHPIGFELKDPLQVIPATKISVILCAAIYFATGLFGYLLFGDATMSDILVNFDQSSGSSIGSLLNDIVRLSYVLHLMLVFPLLNFSLRANLDELLYPKKPSLEKDTKRFIGLTLALLICCFLSAIAVPDIWYFFQFMGSTITVSIAFIFPAAIVLRNIHGVSTSREKIVAAIMLVLAVATSI
type: DOMAIN
name: AA_transpt_TM
description: Amino acid transporter, transmembrane domain
Protein sequence:
MAKDLDELLDEVETKFCRLDPLRLDLGERPKGDGGGGSHSGDRNGAQEKETLRSTETFKKEDDLDSLINEIFEEPDFDRKSFQKFKSKSSSNTCVRAPMQGVSKSCSPVYLSGSAIPCGIGTNTSQRACDRLRCVACDFRIVSYNDYMWDKSCDYLFFRNNMPEFHKLKTKLIEKKGARAYACQCSWRTVEELTDLQTDHQLRWVCGKH

Annotated regions:
Protein sequence:
MNKICLKYLLLPWIKNIPKKYISNLKMDSRTLTPGDLFIAVPGIKKDGRHFIVQAINKKAAAILCETKKKDKHGIFKYIKNVILIYFFKLSENVSLLANRFYKEPGKRLKIIGITGTNGKTTVTQLINQWSTILGTKTATMGTLGNGFYNSLQPTNNTTSSPIFIQLFLSKVLEKQAELVTMEVSSHGLIQHRVKEVPFYIAIFTNLTQDHLDYHENLEKYESAKWLLFSTHKVKKIILNADDQYGKIWLKKLLNFYTVAVTIQNRKQKKYSTKWINATNIEQNNNSIYITFESSWGTGRISSCLIGRFNVTNLLLSLACLLELGYSLSDLIHTSEKIIPVQGRMELFSYVKKPTFIIDYAHTPDALKKTLNAIHSHYQRYIWCIFGCGGERDQKKRPIMGAIAEKMSDKVIITNDNPRNEKEKKIIQDILNGCKNKEKILIIPDRKKAISYAYFGAKYHHIILIAGKGHEEKQIIQNRSINYSDKKIVLNLLGKNI

Annotated regions:
phrase: GRMELFSYVKKPTFIIDYAHTPDALKKTLNAIHSHYQRYIWCIFGCGGERDQKKRPIMGAIAEKMSDKVIITNDNPRNEKEKKIIQDILNGCKNKEKILIIPDRKKAISYAYFGAKYHHIILIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: ITGTNGKTTVTQLINQWSTILGTKTATMGTLGNGFYNSLQPTNNTTSSPIFIQLFLSKVLEKQAELVTMEVSSHGLIQHRVKEVPFYIAIFTNLTQDHLDYHENLEKYESAKWLLFSTHKVKKIILNADDQYGKIWLKKLLNFYTVAVTIQNRKQKKYSTKWINATNIEQNNNSIYITFESSWGTGRISSCLIGRFNVTNLLLSLA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: ISNLKMDSRTLTPGDLFIAVPGIKKDGRHFIVQAINKKAAAILCETKKKDKHGIFKYIKNVILIYFFKLSENVSLLANRF
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain
Protein sequence:
MSDHPTAYLVLASQRSGSTLLVESLRATGVAGEPQEFFQYLPNTSMSPQPREWFADVEDQSILRLLDPLIEGKPDLAPATIWRDYIQTVGRTPNGVWGGKLMWNQTPLLVQRAKDLPDRSGSGLLSAIRDVVGSDPVLIHIHRPDVVSQAVSFWRAVQTRVWRGRPDPVRDARAEYHAGAIAHVITMLRAQEEGWRAWFTEENVEPIDVDYPYLWRNLTEVVGTVLEALGQDPRLAPKPVLERQADQRSDEWVERYRRDAQRDGLPL

Annotated regions:
phrase: AYLVLASQRSGSTLLVESLRATGVAGEPQEFFQYLPNTSMSPQPREWFADVEDQSILRLLDPLIEGKPDLAPATIWRDYIQTVGRTPNGVWGGKLMWNQTPLLVQRAKDLPDRSGSGLLSAIRDVVGSDPVLIHIHRPDVVSQAVSFWRAVQTRVWRGRPDPVRDARAEYHAGAIAHVITMLRAQEEGWRAWFTEENVEPIDVDYPYLWRNLTEVVGTVLEALGQDPRLAPKPVLERQADQRSDEWVERYRR
type: DOMAIN
name: Sulfotransferase_Stf0_dom
description: Sulphotransferase Stf0, domain
Protein sequence:
MGARASILRGEKLDAWEKIKLRPGGKKHYMLKHLVWANRELEKFALNPDLLDTSAGCKQIIKQLQPALQTGTEELKSLFNTVATLYCVHQKIEIKDTKEALDKIEEEQNESQQKTQQAGAADRGKDSQNYPIVQNMQGQMVHQPISARTLNAWVKVVEEKAFSPEVIPMFTALSEGATPQDLNTMLNTVGGHQAAMQMLKDTINEEAAEWDRLHPVHAGPVAPGQMRDPRGSDIAGTTSTLQEQIAWMTGNPPVPVGDIYKRWIILGLNKIVRMYSPVSILDIKQGPKEPFRDYVDRFFKTLRAEQATQDVKNWMTDTLLVQNANPDCKTILRALGPGASLEEMMTACQGVGGPAHKARVLAEAMSQVNNTTIMMQKSNFKGPKRAIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQANFLGRLWPSNKGRPGNFLQSRPEPTAPPESLRPEPTAPPPESFRFEEATPSPKQELKDREALTSLKSLFGNDHLLQ

Annotated regions:
phrase: GCWKCGKEGHQMKDCT
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: KCFNCGKEGHLARNCR
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: IKCFNCGKEGHLARNC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: GCWKCGKEGHQMKDCT
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: CWKCGKEGHQMKDCT
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: RPEPTAPPPESFRFEEATPSPKQELKDRE
type: DOMAIN
name: Gag_p6
description: Gag protein p6

phrase: PVSILDIKQGPKEPFRDYVDRFFKTLRAEQATQDVKNWMTDTLLVQNANPDCKTILRALGPGASLEEMMTACQGVGGPAHKARVLAEAMSQVNNTTIMMQKSNFKGPKRAIKCFNCGKEGHLARNCRAPRKKGCWKCGKEGHQMKDCTERQANFLGRLWPSNKGRPGNFLQSR
type: DOMAIN
name: Primate_lentivir_Gag_pol-like
description: Primate lentivirus group Gag polyprotein-like

phrase: KCFNCGKEGHLARNC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: GARASILRGEKLDAWEKIKLRPGGKKHYMLKHLVWANRELEKFALNPDLLDTSAGCKQIIKQLQPALQTGTEELKSLFNTVATLYCVHQKIEIKDTKEALDKIEEEQNESQQKTQQAGAADRGKDS
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: RASILRGEKLDAWEKI
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: RPGGKKHYMLKHLVWANR
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: EKFALNPDLLDTSAG
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: TGTEELKSLFNTVATLYCV
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: HQKIEIKDTKEAL
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: YSPVSILDIKQGPKEPFRDYVDRFFKTLRAEQATQDVKNWMTDTLLVQNANPDCKTILRALGPGASLEEMMT
type: DOMAIN
name: Gag_p24_C
description: Retroviral nucleocapsid Gag protein p24, C-terminal domain
Protein sequence:
MADMKRLKHLMFSPFIDNNPIALQVLGICSALAVTTKLQTAIVMGISVALVTGFSSFFISLVRNYIPNSIRIIVQMAIIASLVTLVDQLLQAFAYELSKQLSVFVGLIITNCIVMGRAEAFAMKEPPLESLIDGIGNGAGYGMMLLVVATVRELIGSGKLLGYTVFQTVQDGGWYQTNGLFLLAPSAFFIIGFLIWGLRTWKPEQAEE

Annotated regions:
Protein sequence:
MAGNDCGALLDEELSSFFLNYLSDTQGGESGEEQLCADLPELDLSQLDASDFDSATCFGELQWCPETSETEPSQYSPDDSEFFQIDSENEALLAALTKTLDDIPEDDVGLAAFPGLDEGDTPSCTPASPAPLSVPPSPALERLLSPVSEVDELSLLQKLLLATSSPTASSDALKDGATWSQTSLSSRSQRPCVKVDGTQDKKTPMLRSQSRPCTELHKHLTSVLPCPRGKACSPPPHPSPQLLSKEDEEVGEDCPSPWPAPASPQDSLGQDTANPNSAQVPKDDVRAMVQLIRYMHTYCLPQRKLPQRASEPIPQSCSSPLRKVPPRSRQTPKAFWTEFSILRELLAQDILCDVSKPYRLATPVYASLTPQSRTRPPKDSQASPAHSAMAEEVRITASPKSTGPRPSLRPLRLEVKRDVNKPARQKREEDEEEEEEEEEEEEKEDEEEEWGRKRPGRGLPWTKLGRKMDSSVCPVRRSRRLNPELGPWLTFTDEPLGALPSMCLATETHDLEEELGGLTDSSQGQQLPLGSQIPTLESPCESGCGDTDEDPSCPRPPSRDSPRCLMLALSQSDPLGKKSFEESLTVELCGTAGLTPPTTPPYKPMEEDPFKQDTKHSPGQDTAPSLPSPETLQLTATPGASHKLPKRHPERSELLSHLQHATTQPVSQAGQKRPFSCSFGDHDYCQVIRPEAALQRKVLRSWEPIKVHLEDLAHQGATLPVETKTPRREADQNCDPTPKDSMQLRDHEIRASLTKHFGLLETALEEEDLASCKSPEYDTVFEDSSSSSGESSFLLEEEEEEGGEEDDEGEDSGVSPPCSDHCPYQSPPSKASRQLCSRSRSSSGSSSCSSWSPATRKNFRLESRGPCSDGTPSARHAKKRREKAIGEGRVVYIRNLSGDMSSRELKKRFEVFGEIVECQVLRRSKRGQKHGFITFRCSEHAALSVRNGATLRKRNEPSFHLSYGGLRHFRWPRYTDYDPTSEESLPSSGKSKYEAMDFDSLLKEAQQSLH

Annotated regions:
phrase: EKAIGEGRVVYIRNLSGDMSSRELKKRFEVFGEIVECQVLRRSKRGQKHGFITFRCSEHAALSVRNGATLRKRNEPSFHLSYGGLRHFRWPRYTDY
type: DOMAIN
name: PPARGC1B_RRM
description: PPARGC1B, RNA recognition motif

phrase: VVYIRNLSGDMSSRELKKRFEVFGEIVECQVLRRSKRGQKHGFITFRCSEHAALSVRNGATLRKRNEPSF
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: VYIRNLSGDMSSRELKKRFEVFGEIVECQVLRRSKRGQKHGFITFRCSEHAALSVRNGATLRK
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: RVVYIRNLSGDMSSRELKKRFEVFGEIVECQVLRRSKRGQKHGFITFRCSEHAALSVRNGATLRK
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain
Protein sequence:
MILVLLGPPGSGKGTQGALLKSELSFEHISTGDMLRAEVSKKSPLGLKAEEYMKQGLLVPDDLIIAMIKNILTEAPHKNYVFDGFPRNVNQAEAFETMLNTMRLQVDKVFYFDLEDDVIIKRLSGRRVCPKCGATYNIYYQKPKNDTLCDNDATPLIQRDDDKEEVIVNRLRVYKEQTFPLIEYYKYKNKLFVVSADGTQEEVFEKLKSML

Annotated regions:
phrase: RRVCPKCGATYNIYYQKPKNDTLCDNDATPLIQRD
type: DOMAIN
name: Adenylate_kinase_lid-dom
description: Adenylate kinase, active site lid domain

phrase: YVFDGFPRNVN
type: CONSERVED_SITE
name: Adenylat_kinase_CS
description: Adenylate kinase, conserved site
Protein sequence:
MSTLRLLISDSYDPWFNLAVEECIFRQMPATQRVLFLWRNADTVVIGRAQNPWKECNTQRMEEDNVRLARRSSGGGAVFHDLGNTCFTFMAGKPEYDKTISTSIVLNALNALGVSAEASGRNDLVVKTAEGDRKVSGSAYRETKDRGFHHGTLLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLPGITHEQVCEAIREAFFAHYGERVEAEIISPDKTPDLPNFAETFARQSSWEWNFGQAPAFSHLLDERFTWGGVELHFDVEKGHITRAQVFTDSLNPAPLEALAGRLQGCLYRADMLQQECEALLVDFPEQEKELRELSAWMAGAVK

Annotated regions:
phrase: DPWFNLAVEECIFRQMPATQRVLFLWRNADTVVIGRAQNPWKECNTQRMEEDNVRLARRSSGGGAVFHDLGNTCFTFMAGKPEYDKTISTSIVLNALNALGVSAEASGRNDLVVKTAEGDRKVSGSAYRETKDRGFHHGTLLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLPGITHEQVCEAIREA
type: DOMAIN
name: BPL_LPL_catalytic
description: Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain

phrase: PATQRVLFLWRNADTVVIGRAQNPWKECNTQRMEEDNVRLARRSSGGGAVFHDLGNTCFTFMAGKPEYDKTISTSIVLNALNALGVSAEASGRNDLVVKTAEGDRKVSGSAYRETKDRGFHHGTLLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLPGITHEQVCEAIREAFFAHYGER
type: DOMAIN
name: BPL_LPL_catalytic
description: Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain

phrase: PAFSHLLDERFTWGGVELHFDVEKGHITRAQVFTDSLNPAPLEALAGRLQGCLYRADMLQQECEALLVDFPEQEKELRELSA
type: DOMAIN
name: Lipoate_protein_ligase_C
description: Lipoate protein ligase, C-terminal
Protein sequence:
MLNKPNIRDLSLPELKSYFESIGDKKFRAIQAYEWLWKHHVRSFEDMTNLSVGLRKKLAEDFALNSILVDKVQHSNDGTLKTRFVTYDGHYMEGVMIPTENRNTACVSSQIGCSLTCRFCATGMMDRKRNLSFEEIYDQVAILHEQSEQATGKKLSNIVFMGMGEPLLNYKNVLKAVDRITAVDSMAMSPKRITVSTAGVAKMIRQLGDDQVRFNLALSLHAPTDEKRNDIMPINETNSIQSLVDALNYFYDKTKNDITLEYILFKDKNDSLKDAEELIKIYRKIPTHLINVIEYNPVAGADFAKPDEQKTQAFTQYLAQHRVNVRVRRSRGKDIDAACGQLANKDKATAKSTL

Annotated regions:
phrase: TENRNTACVSSQIGCSLTCRFCATGMMDRKRNLSFEEIYDQVAILHEQSEQATGKKLSNIVFMGMGEPLLNYKNVLKAVDRITAVDSMAMSPKRITVSTAGVAKMIRQLGDDQVRFNLALSLHAPTDEKRNDIMPINETNSIQSLVDALNYFYDKTKNDITLEYILFKDKNDSLKDAEELIKIYRKIPTHLINVIEYNPVAGADFAKPDEQKTQAFTQYLAQHRVNVRVRRSRGK
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SQIGCSLTCRFCATGMMDRKRNLSFEEIYDQVAILHEQSEQATGKKLSNIVFMGMGEPLLNYKNVLKAVDRITAVDSMAMSPKRITVSTAGVAKMIRQLGDDQVRFNLALSLHAPTDEKRNDIMPINETNSIQSLVDALNYFYDKTKNDITLEYILFKDKNDSLKD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: NTACVSSQIGCSLTCRFCATGMMDRKRNLSFEEIYDQVAILHEQSEQATGKKLSNIVFMGMGEPLLNYKNVLKAVDRITAVDSMAMSPKRITVSTAGVAKMIRQLGDDQVRFNLALSLHAPTDEKRNDIMPINETNSIQSLVDALNYFYDKTKNDITLEYILFKDKNDSLKDAEELIKIYRKIPTHLINVIEYNPVAGADFAKPDEQKTQAFTQYLA
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: NKPNIRDLSLPELKSYFESIGDKKFRAIQAYEWLWKHHVRSFEDMTNLSVGLRKKLAEDFALNSILVDKVQHSNDGTLKTRFVTYDGHYMEGVMIPTENRNTACVSSQIGCSLTCRFCATGMMDRKRNLSFEEIYDQVAILHEQSEQATGKKLSNIVFMGMGEPLLNYKNVLKAVDRITAVDSMAMSPKRITVSTAGVAKMIRQLGDDQVRFNLALSLHAPTDEKRNDIMPINETNSIQSLVDALNYFYDKTKNDITLEYILFKDKNDSLKDAEELIKIYRKIPTHLINVIEYNPVAGADFAKPDEQKTQAFTQYLAQHRVNVRVRRSRGKDIDAACGQLANKDKATA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: NIRDLSLPELKSYFESIGDKKFRAIQAYEWLWKHHVRSFEDMTNLSVGLRKKLAE
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MKQEQSHEGDSYSTEFINLFGKDTATHPSSNNGANNNGMGSTNSLDQFVATASSSSSLVTSSENRRPLIGDVTNRGNTNLYDHAVTPEILLEQLAYVDNFIPSLDNEFSNVDWNVNTTHNNANNNGADTFSSINANPFDLDEQLAIELSAFADDSFIFPDEDKPSNNNNNSNNGNDDHSNHDVLHEDPSTNNRQRNPHFLTQRRNTFLTSQYDQSKSRFSSKNKRNGNNGETNNFGDNMQNNHPFEPNFMGSPSQFPADATNMTSIDHGGFTNVDITSTENNTTGDNGVDALSNLLHRTTHTPNRSSPLSNVTSAQNSSSQQRKHSESKVDSNSDNNSSNKAPNITVPDYSIIPTSVLVTLLPRVNVPNGAYNSLISAGFDNDQIDAIAAIMAYHHQKKIRENNSNNNKNINTNDSQEAPILKNINELLSVLIPPSPAETRGPTTLSTSPSFNEHGVVAEASFLSSILELGIKHPKSNNIHNQRQPSRNDHKISRESDGNNGNDNVHHNNAVIKSSTTRGDEIAKIRSEPTLNASSSDHKENSLKRSHSGDLKNKKVPVDRKYSDNEDDEYDDADLHGFEKKQLIKKELGDDDEDLLIQSKKSHQKKKLKEKELESSIHELTEIAASLQKRIHTLETENKLLKNLVLSSGETEGIKKAESLKKQIFEKVQKE

Annotated regions:
Protein sequence:
MKCPYCGYGESKVVDSRATDDKMAIRRRRECLKCNKRYTTYEKIENVPLLVIKKNMSREYFDRTKILNGLMKACQKRPVSRKQIEEIADEVEKKISNSVLTEINSSDIGEMIMESLKKVDEVSYVRFASVYRQFKDINTFMEEIKNLISNR

Annotated regions:
phrase: MKCPYCGYGESKVVDSRATDDKMAIRRRRECLKCNKRYTTY
type: DOMAIN
name: NrdR-like_N
description: Transcriptional repressor NrdR-like, N-terminal domain

phrase: LLVIKKNMSREYFDRTKILNGLMKACQKRPVSRKQIEEIADEVEKKISNSVLTEINSSDIGEMIMESLKKVDEVSYVRFASVYRQFKDIN
type: DOMAIN
name: ATP-cone_dom
description: ATP-cone domain

phrase: LVIKKNMSREYFDRTKILNGLMKACQKRPVSRKQIEEIADEVEKKISNSVLTEINSSDIGEMIMESLKKVDEVSYVRFASVYRQFK
type: DOMAIN
name: ATP-cone_dom
description: ATP-cone domain
Protein sequence:
MTSAVGTSGTAITSRVHSLNRPNMVSVGTIVWLSSELMFFAGLFAFYFSARAQAGGNWPPPPTELNLYQAVPVTLVLIASSFTCQMGVFAAERGDIFGLRRWYVITFLMGLFFVLGQAYEYRNLMSHGTSIPSSAYGSVFYLATGFHGLHVTGGLIAFIFLLVRTGMSKFTPAQATASIVVSYYWHFVDIVWIALFTVIYFIR

Annotated regions:
phrase: MTSAVGTSGTAITSRVHSLNRPNMVSVGTIVWLSSELMFFAGLFAFYFSARAQAGGNWPPPPTELNLYQAVPVTLVLIASSFTCQMGVFAAERGDIFGLRRWYVITFLMGLFFVLGQAYEYRNLMSHGTSIPSSAYGSVFYLATGFHGLHVTGGLIAFIFLLVRTGMSKFTPAQATASIVVSYYWHFVDIVWIALFTVIYFI
type: DOMAIN
name: Cyt_c_oxidase-like_su3
description: Cytochrome c oxidase subunit III-like

phrase: PNMVSVGTIVWLSSELMFFAGLFAFYFSARAQAGGNWPPPPTELNLYQAVPVTLVLIASSFTCQMGVFAAERGDIFGLRRWYVITFLMGLFFVLGQAYEYRNLMSHGTSIPSSAYGSVFYLATGFHGLHVTGGLIAFIFLLVRTGMSKFTPAQATASIVVSYYWHFVDIVWIALFTVIY
type: DOMAIN
name: Cyt_c_oxidase-like_su3
description: Cytochrome c oxidase subunit III-like
Protein sequence:
MPEYRSKTSTHGRNMAGARALWRATGMQDGDFQKPIIAIANSFTQFVPGHVHLKDLGQLVAREIERVGGVAKEFDTIAVDDGIAMGHDGMLYSLPSREIIADSVEYMVNAHCADALVCISNCDKITPGMLMAALRLNIPTVFVSGGPMEAGKTALAEHKLDLIDAMVIAADDSASDEKVAEFERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGTVVATHADREQLFLRAGRVAVELCHRWYGGEDPTALPRGIATFEAFENAMTLDIAMGGSTNTILHLLAAAQEGEVPFGMQDIDRLSKRVPQLCKVAPNTPKYHIEDVHRAGGIMAILGELARGGLLHTTAATVHARTLADAIAHWDVTQTVDENVHTFYKAGPAGIPTQIAFSQATRWDSLDTDRSEGCIRDVAHALSQEGGLAVLYGNIARDGCVVKTAGVDESIHVFEGTARVFESQDAAVKSILADEVKAGDVVVIRYEGPKGGPGMQEMLYPTSYLKSKGLGKQCALLTDGRFSGGTSGLSIGHASPEAAAGGAIGLVRDGDKILIDIPNRGINLLISDEALASRRAEQDAKGWKPVEVRPRKVTTALKAYALLATSADKGAVRDKALLDG

Annotated regions:
phrase: CIRDVAHALSQEGGLAVLYGNIARDGCVVKTAGVDESIHVFEGTARVFESQDAAVKSILADEVKAGDVVVIRYEGPKGGPGMQEMLYPTSYLKSKGLGKQCALLTDGRFSGGTSGLSIGHASPEAAAGGAIGLVRDGDKILIDIPNRGINLLISDEALASRRAEQDAKGWKPVEVRPRKVTTALKAYALLATSADKG
type: DOMAIN
name: ILV_EDD_C
description: Dihydroxy-acid/6-phosphogluconate dehydratase, C-terminal

phrase: ALLTDGRFSGG
type: CONSERVED_SITE
name: DiOHA_6PGluconate_deHydtase_CS
description: Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site

phrase: CDKITPGMLM
type: CONSERVED_SITE
name: DiOHA_6PGluconate_deHydtase_CS
description: Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site

phrase: KPIIAIANSFTQFVPGHVHLKDLGQLVAREIERVGGVAKEFDTIAVDDGIAMGHDGMLYSLPSREIIADSVEYMVNAHCADALVCISNCDKITPGMLMAALRLNIPTVFVSGGPMEAGKTALAEHKLDLIDAMVIAADDSASDEKVAEFERSACPTCGSCSGMFTANSMNCLTEALGLSLPGNGTVVATHADREQLFLRAGRVAVELCHRWYGGEDPTALPRGIATFEAFENAMTLDIAMGGSTNTILHLLAAAQEGEVPFGMQDIDRLSKRVPQLCKVAPNTPKYHIEDVHRAGGIMAILGELARGGLLHTTAATVHARTLA
type: DOMAIN
name: ILV_EDD_N
description: Dihydroxy-acid/6-phosphogluconate dehydratase, N-terminal