nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MATKAASSSSLPKSGAISKGYNFASTWEQSAPLTEQQQAAIVSLSHAVAERPFPANLVHEHVHRPENGLSVSVEDTHLGDSGAIEAVLVNTNQFYKWFTDLESAMKSETEEKYRHYVSTLTERIQTCDNILHQVDETLDLFNELQLQHQGVTTKTKTLHDACDRLLMEKQKLMEFAEALRSKLNYFDELENVSSNFYSPNMNVSNSNFLPLLKRLDECISYIEDNPQYAESSVYLLKFRQLQSRALGMIRTYILAVLKTAASQVQAAFRGTGGNKTSVSEGVEASVIYVRFKAAANELKPVLEEIESRSARKEYVQILAECHRLYCEQRLSLVKGIVHQRVSDFAKKEALPSLTRSGCAYLMQVCHMEHQLFTHFFPASSEEVSSLAPLVDPLSTYLYDILRPKLIHEANIDLLCELVHILKVEVLGDQSARQSEPLAGLRPTLQRILADVNERLTFRARTYIRDEIANYTPSDEDLDYPAKLEGSPNTTSETDLRDDENADVFKTWYPPLEKTLSCLSKLYRCLEQAVFTGLAQEAVEVCSLSIQKASKLIIKRSTTMDGQLFLIKHLLILREQIAPFDIEFSVTHKELDFSHLLEHLRRILRGQASLFDWSRSTSLARTLSPRVLESQIDAKKELEKCLKTTCEEFIMSVTKLVVDPMLSFVTKVTAIKVALSSGTQNHKVDSVMAKPLKEQAFATPDKVVELVQKVYAAIQQELLPILAKMKLYLQNPSTRTILFKPIKTNIVEAHTQVESLLKAEYSAEEQANINMISIQDLQTQLDNFL

Annotated regions:
phrase: SVIYVRFKAAANELKPVLEEIESRSARKEYVQILAECHRLYCEQRLSLVKGIVHQRVSDFAKKEALPSLTRSGCAYLMQVCHMEHQLFTHFFPASSEEVSSLAPLVDPLSTYLYDILRPKLIHEANIDLLCELVHILKVEVLGDQSARQSEPLAGLRPTLQRILADVNERLTFRARTYIRDEIANYTPSDEDLDYPAKLEGSPNTTSETDLRDDENADVFKTWYPPLEKTLSCLSKLYRCLEQAVFTGLAQEAVEVCSLSIQKASKLIIKRSTTMDGQLFLIKHLLILREQIAPFDIEFSVTHKELDFSH
type: DOMAIN
name: COG3_C
description: Conserved oligomeric Golgi complex subunit 3, C-terminal

phrase: YVSTLTERIQTCDNILHQVDETLDLFNELQLQHQGVTTKTKTLHDACDRLLMEKQKLMEFAEALRSKLNYFDELENVSSNFYSPNMNVSNSNFLPLLKRLDECISYIEDNPQYAESSVYLLKFRQLQSRALGMIRTYILAVL
type: DOMAIN
name: COG3_N
description: Conserved oligomeric Golgi complex subunit 3, N-terminal
Protein sequence:
MKFAWIRPNGTWNDRKEAIVDSLESGFDHIMDLDNAETIKKLGSVTIISDKEDSDITLLGLNNKITMADIKKAQESGKEVAAYVEINNKDDELLVSKLGTVADYVILKGKNWKVIPLENIIASLQNRTSKIIVDVPNYEEAKLALETMEHGSDGVLLSSNDGNEIRKLGALIEKVSKESYDLKAATVTKVESVGIGDRVCVDTCSMMNVGDGMLVGSFASGLFLVHSETLESEYVASRPFRVNAGPVHAYVMTPENKTRYLSELEAGDEVVTLNSKGEANTVIVGRVKIEKRPLLLIEAKYKNSRIRTLVQNAETIRLVNDKGEPISVSKLKVGDKVLAYFSEAARHFGMAIEEQIIEK

Annotated regions:
Protein sequence:
MSDQPVHTSELRPVLPFAFARAQQILLLQDESASAAEVVCVPETPALALLEVRRVAGVALTVSQVSPEEFERQLVMRYQRDSEEARRLMEDIGNDIDFYTLAEELPDSDDLLDGEDDAPIIRLINAMLTEAIKHKASDIHIETFERHLLIRFRIDGVLREILRPQRQLASLLVSRIKVMAKLDIAEKRVPQDGRMALRIGGRAIDVRVSTLPSNYGERVVLRLLDKNSVRLDLETLGMAEHHRRQLDTLIHRPHGIILVTGPTASGKSTTLYAALSPLNSAERNIMTVEDPIEYELEGIGQTQVNPKVDMTFARGLRAILRQDPDVVLVGEIRDGETAQIAVQASLTGHLVLSTLHTNSALGALSRLQDMGIEPFLLSTSLLGVLAQRLVRTLCPSCRQPYTIDHEQAEQTGLAAGTTLYHPGGCEKCNYSGYRGRTGIHELLLIDDTVRAAIHRGESELGIARMLGAKRVTIRQDGLDKVLAGITTWEEVVRVTKEE

Annotated regions:
phrase: LRQDPDVVLVGEIR
type: DOMAIN
name: T2SS/T4SS_dom
description: Type II/IV secretion system domain

phrase: EDDAPIIRLINAMLTEAIKHKASDIHIETFERHLLIRFRIDGVLREILRPQRQLASLLVSRIKVMAKLDIAEKRVPQDGRMALRIGGRAIDVRVSTLPSNYGERVVLRLLDKNSVRLDLETLGMAEHHRRQLDTLIHRPHGIILVTGPTASGKSTTLYAALSPLNSAERNIMTVEDPIEYELEGIGQTQVNPKVDMTFARGLRAILRQDPDVVLVGEIRDGETAQIAVQASLTGHLVLSTLHTNSALGALSRLQDMGIEPFLLSTSLLGVLAQRLVRTLCPSCRQPYTIDHEQAEQTGLAAGTTLYHPGGCEKCNYSGYRGRTGIHELLLIDDTVRAAIHRGESELGIARMLGAKRVTIRQDGLDKVLAGITTWEEVV
type: DOMAIN
name: T2SS/T4SS_dom
description: Type II/IV secretion system domain

phrase: LPFAFARAQQILLLQDESASAAEVVCVPETPALALLEVRRVAGVALTVSQVSPEEFERQLVMR
type: DOMAIN
name: GSPE_N1E
description: Type II secretion system protein E, N1E domain
Protein sequence:
MGIKHLFQVIQENAPDAVKSGDIKNHFGRKVAIDASMSIYSFLIAVRSEGQQLMSESGETTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRTARKAEATEAHEEAKETGTAEEIEKFSRRTVRVTREHNAECKKLLKLMGVPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLCFEAPILLRHLTFSEQRKEPIQEIHLNRVLEGLDMDRSQFIDMCILLGCDYLEPIPKVGPNTALKLIREHGSLEKVVEAIESDPKKKYVIPEDWPYQDARELFHHPDVRAADHPECDFKWEAPDIEALVDFLVKDKGFNEDRVRNGAARLQKNLKTAQQSRLEGFFKPVAKTDAEKASLKRKHDEKLQEQKKRKKEEAKAKKEAKAKPRGAA

Annotated regions:
phrase: KLMGVPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLCFEAPILLRHLTFSEQRKEPIQEIHLNRVLEGLD
type: DOMAIN
name: XPG-I_dom
description: XPG-I domain

phrase: GVPYIDAPTEAEAQ
type: CONSERVED_SITE
name: XPG_CS
description: XPG conserved site

phrase: MGIKHLFQVIQENAPDAVKSGDIKNHFGRKVAIDASMSIYSFLIAVRSEGQQLMSESGETTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRTARKAE
type: DOMAIN
name: XPG_DNA_repair_N
description: XPG, N-terminal

phrase: GVPYIDAPTEAEAQCAVLARAGKVYAAASEDMDTLCFEAPILLRHLTFSEQRKEPIQEIHLNRVLEGLDMDRSQFIDMCILLGC
type: DOMAIN
name: XPG-I_dom
description: XPG-I domain

phrase: IKPLYVFDGAPPKL
type: CONSERVED_SITE
name: XPG_CS
description: XPG conserved site

phrase: RSQFIDMCILLGCDYLEPIPKVGPNTALKLIRE
type: CONSERVED_SITE
name: HhH2
description: Helix-hairpin-helix motif, class 2

phrase: MGIKHLFQVIQENAPDAVKSGDIKNHFGRKVAIDASMSIYSFLIAVRSEGQQLMSESGETTSHLMGMFYRTLRMVDNGIKPLYVFDGAPPKLKSGELAKRTARKAE
type: DOMAIN
name: XPG_DNA_repair_N
description: XPG, N-terminal
Protein sequence:
MTHQFPPLTTEQKKELHEIALRIVSPGKGILAADESIGSMGKRLNQIGVENNEENRRLFRQVLFTADDRIDNCIGGVIFFHETLYQNSDDGVPFVKMIKDKGITIGIKVDKGVVPLPGTNGETATQGLDGLSERCAQYKKDGADFAKWRCVMKISETTPSNLCITENAKVLARYASICQQHGIVPIVEPEILPDGDHNLKRCQFVTERVLAAVYKAMFDHHVYLEGTLLKPNMVTPGHGCPTKYSAEEVAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLSAINNCRLVKPWALTFSFGRALQASALKTWRGQRENEAAATEEFIKRAEINSLASQGKYTVCGDSSGATGLSHYLSSYAY

Annotated regions:
phrase: VYLEGTLLKP
type: CONSERVED_SITE
name: Aldolase_I_AS
description: Fructose-bisphosphate aldolase class-I active site
Protein sequence:
MRPLTEEETRVMFEKIAKYIGENLQLLVDRPDGTYCFRLHNDRVYYVSEMILKLAANISGDKLVSLGTCFGKFTKTHKFRLHVTALDFLAPYAKYKVWIKPGAEQSFLYGNHVLKSGLGRITENTSQYQGVVVYSMADVPLGFGVAAKSTQDCRKVDPMAIVVFHQADIGEYIRHEETLT

Annotated regions:
phrase: RPLTEEETRVMFEKIAKYIGENLQLLVDRPDGTYCFRLHNDRVYYVSEMILKLAANISGDKLVSLGTCFGKFTKTHKFRLHVTALD
type: DOMAIN
name: Nip7_N_euk
description: 60S ribosome subunit biogenesis protein Nip7, pre-PUA domain, eukaryotes

phrase: MRPLTEEETRVMFEKIAKYIGENLQLLVDRPDGTYCFRLHNDRVYYVSEMILKLAANISGDKLVSLGTCFGKFTKTHKFRLH
type: DOMAIN
name: NIP7_N
description: 60S ribosome subunit biogenesis protein NIP7, pre-PUA domain

phrase: KVWIKPGAEQSFLYGNHVLKSGLGRITENTSQYQGVVVYSMADVPLGFGVAAKSTQDCRKVDPMAIVVFHQADIGEYIR
type: DOMAIN
name: UPF0113_PUA
description: UPF0113, PUA domain

phrase: YKVWIKPGAEQSFLYGNHVLKSGLGRITENTSQYQGVVVYSMADVPLGFGVAAKSTQDCRKVDPMAIVVFHQADIGE
type: DOMAIN
name: UPF0113_PUA
description: UPF0113, PUA domain

phrase: YKVWIKPGAEQSFLYGNHVLKSGLGRITENTSQYQGVVVYSMADVPLGFGVAAKSTQDCRKVDPMAIVVFHQADI
type: DOMAIN
name: PUA
description: PUA domain
Protein sequence:
MNKFDEFIESNEKDLDVDTSTRNSIISMSPVRKTGRKIRSASSNGYRLEHHRTSSAGSMHSQRLMTPTRLNDQDHPLQAKTDARRVVTRHSSVSVPNAMSKRRSLIQPMVVPTTPESQNNLPFGGSVSHSEGSYGIPLESTTVLSSEQAMASGLRRSRNGSSQSVNSMIATTIPTNGVDVSALLQSLATKELELLECKQKIEDLKKQTQHEEQNYTRRARELHELKEQVSKHLDPSLNTPVKNRAFSPVYQNIPLESRTENAGNSSLPSSVSKPKNMGHQSTNQSRSVSPQDIQERRQRDDSSDSSKQSLWSKPLALFNQFDKIIQHEIERTLNWDDSLSGTPEVQEGTPTSNSESSAQQYDNEAPGARQKSPSQGSVSRSLWSFVSDVKAGLLGIEEENDNDVITDNRCDPVYKSDRQHEQKKSTQKITNRGQAEDSGDDSSLNMRKFKTTTKFQKDNAGNNSLTDESGHRTREKKSKRSSNKLSFIGEPDNDNSSVKNSVEMTDF

Annotated regions:
Protein sequence:
MRPDHNQLRPLSELVRLLETNAFGGRPDPDGTTDAVPPAVIGDDLDVTETTITGITHDSRGVRPGDLYAALPGQRAHGAAYAEQAARAGAVAILTDPQGYERAVATGLPVLTVPDPRAVLGEAAAWVYGHPADELLLIGTTGTSGKTTVTYLIESGLRASGRRTGLIGTVEMRVGDERVDSSLTTPESTDLHGLFAVMRERGVDAAAMEVSSHALAKGRVGGAHYDVAIFTNLSQDHLDFHADLRDYFDTKARLFTPEFARIAVVNRDDRFGRALIDMVAAHGEVPVTTFSSEGDPEADWRAVDVELGPDGSTFRIVGPGGLETNAAVRLPGPFNVSNAMAAIVGLVEAGIPLHEAIEGVAAAPGVPGRMERVDEGQNFTAIVDYSHKPGAIEAVLSSLRSITEGRLTIVVGCGGDRDRAKRPLMGEAAARLADAVILTDDNPRTEDSITIITSMLDGVAKVPQEERARITVEPDRATAIQMAVERAKPGDVLVVAGKGHERGQYVAGRVLEFDDREVLRDALRWRVGDS

Annotated regions:
phrase: TITGITHDSRGVRPGDLYAALPGQRAHGAAYAEQAARAGAVAILTDPQGYERAVATGLPVLTVPDPRAVLGEAA
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: GRMERVDEGQNFTAIVDYSHKPGAIEAVLSSLRSITEGRLTIVVGCGGDRDRAKRPLMGEAAARLADAVILTDDNPRTEDSITIITSMLDGVAKVPQEERARITVEPDRATAIQMAVERAKPGDVLVVAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: TGTSGKTTVTYLIESGLRASGRRTGLIGTVEMRVGDERVDSSLTTPESTDLHGLFAVMRERGVDAAAMEVSSHALAKGRVGGAHYDVAIFTNLSQDHLDFHADLRDYFDTKARLFTPEFARIAVVNRDDRFGRALIDMVAAHGEVPVTTFSSEGDPEADWRAVDVELGPDGSTFRIVGPGGLETNAAVRLPGPFNVSNAMAAI
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central
Protein sequence:
MNLLRYTSKSIQKAIEHRIEHRPDRENLHWNPELVSESPAPDEKALSSSSAARSNPYVARAPTETSDASLKETMESVKGVLGRWGRRVGEAAMKAESLAGNTWQHPLRAAMGRIAQSTKVLAEGGYEKIFRQTFETVPEEQLQNSFACYLSTSAGPVMGVLYVSTAKLAYCSDTSLVVIPLHQLKSVNPSISTVNPAEKYIQVISVDDHEFWFMGFLNYEGAVTSLQDTLQAGASVCVI

Annotated regions:
phrase: IFRQTFETVPEEQLQNSFACYLSTSAGPVMGVLYVSTAKLAYCSDTSLVVIPLHQLKSVNPSISTVNPAEKYIQVISVDDHEFWFMGFLNYEGAVTSLQDTL
type: DOMAIN
name: GRAM
description: GRAM domain

phrase: KIFRQTFETVPEEQLQNSFACYLSTSAGPVMGVLYVSTAKLAYCSDTSLVVIPLHQLKSVNPS
type: DOMAIN
name: GRAM
description: GRAM domain
Protein sequence:
MSKLKTRKSAAKRFKATATGKFMRRRAFHNHLLDHKSSKLKRHLSTKAVVDERDADNVRLMIPYA

Annotated regions:
phrase: KTRKSAAKRFKATATGKFMRRRAFHN
type: CONSERVED_SITE
name: Ribosomal_bL35_CS
description: Large ribosomal subunit protein bL35, conserved site
Protein sequence:
MQQYLDLMKHILAEGVDKSDRTGTGTRSVFGYQMRFDLSKGFPLVTTKKCHMRSIIHELLWFLKGETNIAYLRENKVSIWDEWADDNGDLGPVYGAQWRSWPTQSGDAIDQISQVIAQIKAQPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTVLQLSREPKPLPLMTILRKPESIFDYQFEDFELTNYNPHPHIKAPVAV

Annotated regions:
phrase: QYLDLMKHILAEGVDKSDRTGTGTRSVFGYQMRFDLSKGFPLVTTKKCHMRSIIHELLWFLKGETNIAYLRENKVSIWDEWADDNGDLGPVYGAQWRSWPTQSGDAIDQISQVIAQIKAQPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYALLTMMVAQQCDLALGDFVWTGGDTHLYSNHME
type: DOMAIN
name: Thymidate_synth/dCMP_Mease_dom
description: Thymidylate synthase/dCMP hydroxymethylase domain

phrase: RRLIVSAWNVGELDKMALAPCHAFFQFY
type: ACTIVE_SITE
name: Thymidylate_synthase_AS
description: Thymidylate synthase, active site

phrase: QQYLDLMKHILAEGVDKSDRTGTGTRSVFGYQMRFDLSKGFPLVTTKKCHMRSIIHELLWFLKGETNIAYLRENKVSIWDEWADDNGDLGPVYGAQWRSWPTQSGDAIDQISQVIAQIKAQPDSRRLIVSAWNVGELDKMALAPCHAFFQFYVADGKLSCQLYQRSCDVFLGLPFNIASYALLTMMVAQQCDLALGDFVWTGGDTHLYSNHMEQTVLQLSREPKPLPLMTILRKPESIFDYQFEDFELTNYNPHPHIKAPVA
type: DOMAIN
name: Thymidate_synth/dCMP_Mease_dom
description: Thymidylate synthase/dCMP hydroxymethylase domain
Protein sequence:
MELAEFWNDLNTFTIYGPNHTDMTTKYKYSYHFPGEQVADPQYWTILFQKYWYHSITISVLYFILIKVIQKFMENRKPFTLKYPLILWNGALAAFSIIATLRFSIDPLRSLYAEGFYKTLCYSCNPTDVAAFWSFAFALSKIVELGDTMFIILRKRPLIFLHYYHHAAVLIYTVHSGAEHTAAGRFYILMNYFAHSLMYTYYTVSAMGYRLPKWVSMTVTTVQTTQMLAGVGITWMVYKVKTEYKLPCQQSVANLYLAFVIYVTFAILFIQFFVKAYIIKSSKKSKSVKNE

Annotated regions:
phrase: LIFLHYYH
type: CONSERVED_SITE
name: ELO_CS
description: ELO family, conserved site
Protein sequence:
SVPGPMGPSGPRGLPGPPGPGPQGFQGPPGEPGEPGSGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGPGERGRPGASGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGARGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPSGPPGPKGNSGEPGAPGSKGDTGAKGEPGPTGIQGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGSNGAPGSQGAPGLQGMPGERGAAGLPGPKGDRGDAGPKGADGAPGKDGVRGLTGPIGPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPTGPPGPIGNLGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPVGKEGGKGPRGETGPAGRPGEVGPPGPPGPSGEKGSPGADGPAGAPGTPGPQGISGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGSSGERGPPGPMGPPGLAGPPGESGREGPGAEGSPGRDGSPGPKGDRGETGPGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPAGPAGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPAGPPGSPGEQGPSGASGPAGPRGPPGSAGSPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPP

Annotated regions:
phrase: GPSGPQGPSGPPGPKGNSGEPGAPGSKGDTGAKGEPGPTGIQGPPGPAGEEGKRGARG
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: GPPGPAGPTGPPGPIGNLGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGP
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: GPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPG
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: GRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPAGKDGE
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: SGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHR
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: GPAGARGPAGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPAGPPGSPGEQGPSGASG
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: GASGPAGPRGPPGSAGSPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPG
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: GERGVPGPPGAVGPAGKDGEAGAQGPPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPG
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: GVVGLPGQRGERGFPGLPGPSGEPGKQGPSGSSGERGPPGPMGPPGLAGPPGESGREG
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: GDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKG
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: GARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRG
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: GPQGARGSEGPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPG
type: REPEAT
name: Collagen
description: Collagen triple helix repeat
Protein sequence:
MRSRQTRDRYRLLPEGYQVTPGRNRHPGTMVGNTPVLWIPELSGTSDPDRGFWAKLEGFNPGGMKDRPALYMVECARARGDIAPGAAIVESTGGTLGLGLALAGKVYRHPVTLVTDPGLEPIIARMLTAYGAGVDMVTQPHPVGGWQQARKDRVAQLMAEYPGAWNPNQYGNPDNVGAYRSLALELVAQLGRIDVLVCSVGTGGHSAGVARVLREFNPDMRLIGVDTIGSTIFGQPASNRLMRGLGSSIYPRNVDYRAFDEVHWVAPPEAVWACRSLAATHYASGGWSVGAVALVAGWAARNLPADTTIAAVFPDGPQRYFDTIYNDAYCNEHELLGGQPPTEPDEIASPLDAVVTRWTRSTTVIDPTQVVS

Annotated regions:
phrase: VGNTPVLWIPELSGTSDPDRGFWAKLEGFNPGGMKDRPALYMVECARARGDIAPGAAIVESTGGTLGLGLALAGKVYRHPVTLVTDPGLEPIIARMLTAYGAGVDMVTQPHPVGGWQQARKDRVAQLMAEYPGAWNPNQYGNPDNVGAYRSLALELVAQLGRIDVLVCSVGTGGHSAGVARVLREFNPDMRLIGVDTIGSTIFGQPASNRLMRGLGSSIYPRNVDYRAFDEVHWVAPPEAVWACRSLAATHYASGGWSVGAVALVAGWAARNLPADTTIAAVFP
type: DOMAIN
name: TrpB-like_PALP
description: Tryptophan synthase beta chain-like, PALP domain
Protein sequence:
MSGNTLGTLFCVTNFGESHGPAIGCVVDGCPPGLALDAADIQAELDRRRPGTSRHVTQRQEADQVEILSGVYQGVTTGTPIALLIRNTDARSKDYSNIADTFRPGHADFTYTRKYGLRDPRGGGRSSARLTAPTVAAGAIAKKWLAEHHGVRVRGYMSQLGPIAIPFVSWDDVPANPFYAPNAAIVPELEAYMDQLRRDGDSVGARIEVVAENLPAGWGEPLYDRLDADIAHVMMGLNAVKGVSIGAGFGCIAQRGSEHGDEITPDGFVGNNAGGVLGGISTGQPVTVSLAIKPTSSIRVERRSVNSAGEPVMVQTLGRHDPCVGIRATPIAEAMLALVLIDHALRHRAQCG

Annotated regions:
phrase: GRSSARLTAPTVAAGA
type: CONSERVED_SITE
name: Chorismate_synthase_CS
description: Chorismate synthase, conserved site

phrase: RHDPCVGIRATPIAEA
type: CONSERVED_SITE
name: Chorismate_synthase_CS
description: Chorismate synthase, conserved site

phrase: GESHGPAIGCVVDGC
type: CONSERVED_SITE
name: Chorismate_synthase_CS
description: Chorismate synthase, conserved site
Protein sequence:
MEEEDEEARALLAGGPDEADRGAPAAPGALPALCDPSRLVHRLLVLLLMCFLGFGSYFCYDNPAALQTQVKRDMQVNTTKFMLLYAWYSWSNVVLCFFGGFLIDRVFGIRWGTIIFSCFVCIGQVVFALGGIFNAFWLMEFGRFVFGIGGESLAVAQNTYAVSWFKGKELNLVFGLQLSMARIGSTVNMNLMGWLYSKIEALLGSAGHTTLGITLMIGGVTCILSLICALALAYLDQRAERILHKEQGKTGEVIKLTDVKDFSLPLWLIFIICVCYYVAVFPFIGLGKVFFTEKFGFSSQAASAINSVVYVISAPMSPVFGLLVDKTGKNIIWVLCAVAATLVSHMMLAFTMWNPWIAMCLLGLSYSLLACALWPMVAFVVPEHQLGTAHGFMQSIQNLGLAIISIIAGMILDSRGYLFLEVFFIACVSLSLLSVVLLYLVNRAQGGNLNYSARQREEIKFSHTE

Annotated regions:
phrase: RLLVLLLMCFLGFGSYFCYDNPAALQTQVKRDMQVNTTKFMLLYAWYSWSNVVLCFFGGFLIDRVFGIRWGTIIFSCFVCIGQVVFALGGIFNAFWLMEFGRFVFGIGGESLAVAQNTYAVSWFKGKELNLVFGLQLSMARIGSTVNMNLMGWLYSKIEALLGSAGHTTLGITLMIGGVTCILSLICALALAYLDQRAERILHKEQGKTGEVIKLTDVKDFSLPLWLIFIICVCYYVAVFPFIGLGKVFFTEKFGFSSQAASAINSVVYVISAPMSPVFGLLVDKTGKNIIWVLCAVAATLVSHMMLAFTMWNPWIAMCLLGLSYSLLACALWPMVAFVVPEHQLGTAHGFMQSIQNLGLAIISIIAGMILDSRGYLFLEVFFIACVSLSLLSVVLLYLVNRA
type: DOMAIN
name: MFS_dom
description: Major facilitator superfamily domain
Protein sequence:
MNLILMGLPGAGKGTQAEKIIDTYGIPHISTGDMFRAAMKNETALGLEAKSYIDKGELVPDEVTNGIVKERLAEPDTDKGFLLDGFPRTLDQAKALDTMLKELNKKIDAVIDIHVEEDVLIERLAGRFICRTCGATYHKLFNPPKVEGTCDRCGGHEFYQREDDKPETVKNRLAVNIESSAPILAFYKEQGLMHTIDGNREIDTVFSDVKKIIDEN

Annotated regions:
phrase: FLLDGFPRTLD
type: CONSERVED_SITE
name: Adenylat_kinase_CS
description: Adenylate kinase, conserved site

phrase: RFICRTCGATYHKLFNPPKVEGTCDRCGGHEFYQRE
type: DOMAIN
name: Adenylate_kinase_lid-dom
description: Adenylate kinase, active site lid domain
Protein sequence:
MVRGPKKHLKRVAAPHHWLLDKLSGTYAPKPSPGPHKARECLPLIVFLRNRLKYALNGREVKAILMQRLIQVDGKVRTDSTFPTGFMDVISVEKTGEHFRLVYDIKGRFTVHRITAEEAKYKLCKVKRVQLGAKGVPFLVTHDGRTIRYPDPLIKVNDTIKLNLETNKIESFIKFDTSAQVMVTGGRNMGRVGTIVHREHHLGSFEIIHVKDALDREFATRLSNVFVIGEAGKSWISLPKGKGVKLSITEERDRRRALKGLA

Annotated regions:
phrase: DALDREFATRLSNVFVIGEAGKSWISLPKGKGVKLSITEERDRRR
type: DOMAIN
name: Ribosomal_eS4_C
description: Small ribosomal subunit protein eS4, C-terminal domain

phrase: HLKRVAAPHHWLLD
type: CONSERVED_SITE
name: Ribosomal_eS4_N_CS
description: Small ribosomal subunit protein eS4, N-terminal, conserved site

phrase: TGEHFRLVYDIKGRFTVHRITAEEAKYKLCKVKRVQLGAKGVPFLVTHDGRTIRYPDPLIKVNDTIKLNLETNK
type: DOMAIN
name: Ribosomal_eS4_central_region
description: Small ribosomal subunit protein eS4, central region

phrase: LPLIVFLRNRLKYALNGREVKAILMQRLIQVDGKVRTDSTFPTGFMDVISVEKTGEHFRLVYDI
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: QVMVTGGRNMGRVGTIVHREHHLGSFEIIH
type: DOMAIN
name: KOW
description: KOW

phrase: RGPKKHLKRVAAPHHWLLDKLSGTYAPKPSPGPHKA
type: DOMAIN
name: Ribosomal_eS4_N
description: Small ribosomal subunit protein eS4, N-terminal

phrase: FDTSAQVMVTGGRNMGRVGTIVHREHHLGSFEIIHVKDALDREFATRLSNVFVI
type: DOMAIN
name: Ribosomal_eS4_KOW
description: Small ribosomal subunit protein eS4, KOW domain
Protein sequence:
MQFLPKADPEIFAALKKEDERQENNLEMIASENFVSRAVLEAYTSTLTNKYAEGYPGKRYYNGCHNADVVETLAIERAKKLFGSQYANVQPHSGAQANMAVFLACLEPGDSFLGMNLAHGGHLTHGSPVNVSGKIYKPIPYGVDSKTETINYDEVAKLAREHKPKLIVAGASAYARTIDFSKFAEIAKEVGAKLMADIAHISGLVATGYHPSPIGMFDFVTTTTHKTLRGPRGGLILSTLENEKVLNSRVFPGIQGGPLMHVIAAKAVAFQEALQPDYKKYIETVLANAKTLAEVFVKRGYRVVSGGTDNHLVLLDVSVKGLTGAQAADGLDEVGVTVNKNAIPFDKNPPAVASGIRLGTPALTTRGLKPADMETVGNLICDFLDHPNDDKNRTKVKGGIQEMTQKFPMNQFRLD

Annotated regions:
phrase: DFVTTTTHKTLRGPRG
type: BINDING_SITE
name: Ser_HO-MeTrfase_PLP_BS
description: Serine hydroxymethyltransferase, pyridoxal phosphate binding site

phrase: PKADPEIFAALKKEDERQENNLEMIASENFVSRAVLEAYTSTLTNKYAEGYPGKRYYNGCHNADVVETLAIERAKKLFGSQYANVQPHSGAQANMAVFLACLEPGDSFLGMNLAHGGHLTHGSPVNVSGKIYKPIPYGVDSKTETINYDEVAKLAREHKPKLIVAGASAYARTIDFSKFAEIAKEVGAKLMADIAHISGLVATGYHPSPIGMFDFVTTTTHKTLRGPRGGLILSTLENEKVLNSRVFPGIQGGPLMHVIAAKAVAFQEALQPDYKKYIETVLANAKTLAEVFVKRGYRVVSGGTDNHLVLLDVSVKGLTGAQAADGLDEVGVTVNKNAIPFDKNPPAVASGIRLGTPALTTRGLKPADMETVGNL
type: DOMAIN
name: SHMT-like_dom
description: Serine hydroxymethyltransferase-like domain
Protein sequence:
MACCTGRCTLILLCTLQLVAALERQVFDFLGYQWGPILANFLHIVVTILGLFGTLQYRPRYVIAYAIWAAIWVTWNVFLICFYLEVGDLNKESDLLSFHVSQHQSWWSEHGPGCVRKEAPVAGVAGLESHSYVSVIGCSVEYQYIEVMHSALQILLALLGFVYACYVTSVFTEEEDSFDFIGGFDPFPLYHVNEKSNHLLVKQTSLPA

Annotated regions:
Protein sequence:
MTEDQLLGPRAHGEPCGSAVLKAVAEDFQVEEVLDIPLSGEGEHLWLWVEKRNLNTEEAAKRIARAAGVPLKLISYAGLKDRQALTRQWFSLHLPGKADPDLAAAEDDSLRLLQRVRHQRKLQRGAHSANGFRLRLTDLHADHAQLDARLERIRAQGVPNYFGLQRFGYEGGNLLGARDFAARAELPVQRNLRSRLLSAGRSYLFNRVLAQRVADGSWAEARVGDLLAFTDSRSFFPAAEAECSDPRLAILDLHPTGPLWGEGGSPAGAEIQALEDAVAASEEPIANWLAQAGMKHERRILRLPIGGLSWHYPGPDILQLEFVLPTGCFATAMVRELVSLAGQTDI

Annotated regions:
phrase: GLKDRQALTRQWF
type: CONSERVED_SITE
name: PsdUridine_synth_TruD_CS
description: Pseudouridine synthase TruD, conserved site

phrase: GVPNYFGLQRFGYEGGNLLGARDFAARAELPVQRNLRSRLLSAGRSYLFNRVLAQRVADGSWAEARVGDLLAFTDSRSFFPAAEAECSDPRLAILDLHPTGPLWGEGGSPAGAEIQALEDAVAASEEPIANWLAQAGMKHERRILR
type: DOMAIN
name: PsdUridine_synth_TruD_insert
description: Pseudouridine synthase, TruD, insertion domain
Protein sequence:
MRFPQPHRNGGETQQHFHSTISLQKLKRFNSLILVFRFSAFCFSLASAVFMLTNSRGSDSFHWYNFDAFRYVFAANAIVAVYSLFEMTAAVWEISRNATLFPEVCQVWFDFGHDQVFAYLLLSANSTGTEMARTMKDACTDNKPFCVQSDIAIALGFVGFLFLGVSSLFSGFRVVCFIINGSRFYV

Annotated regions:
phrase: NSLILVFRFSAFCFSLASAVFMLTNSRGSDSFHWYNFDAFRYVFAANAIVAVYSLFEMTAAVWEISRNATLFPEVCQVWFDFGHDQVFAYLLLSANSTGTEMARTMKDACTDNKPFCVQSDIAIALGFVGFL
type: DOMAIN
name: CASP_dom
description: Casparian strip membrane protein domain
Protein sequence:
MEVLMAKGANLVFHNKVIDGIAMKRLISRFIDHFGMAYTSHILDQVKTLGFQQATATSISLGIDDLLTIPSKGWLVQDAEQQSFILEKQHHYGNIHAVEKLRQSIEIWYATSEHLRQEMNPNFRMTDPYNPVHMMSFSGARGNASQVHQLVGMRGLMSDPQGQMIDLPIQSNLREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHVVVRRRDCGTTRGISVSPQTGTIPEILFIQTLIGRVLADDIYKGPRCIAARNQDIGVGLVNRLITFRVQTISIRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAVHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLAVTIESEDIIHNVNIPPKSFLLVQKDQYVESEQVIAEIRAGTSTLNFKEKVRKHIYSDSQGEMHWSTDVDHAPEFTYGNVHLLPKTSHLWILAGRPHKSRVATRSLHKDQDQTNAHFLSVEQRYISNSSVINAYMRHTFFSSDLSSTNSNKGDSISDYSERKRIVRTRHSNLIYPAKNSYLLGKRRRNRFMTTFQSIQELEKELRAPSGISIDIPLNGSFRRNSILAYFDDPRYRRESAGITKYGTIEAHSIKKKEGLIEYRGVNEFRAKYQMQVDRFFFIPEEVHILPRSSAIMVRNNSIIGVDTQITLTTRSRVGGLVRVEKKKKKIGLKIFSGNIHFPGKTDKISRHRGILIPPGRGQTKLKNWSYVQRITPTKKRYFVLIRPAITYEITDGISLSTLFPQDLLQERDKVQLRVVNYILSGNGKPIRGISDTSIQLVRTCLVLNWDHDKKSSSIEESRASFVEVKTNDMMRDFLRIDLVKSTISYAGKRNDPSGSGLLSDNESDRMNPFYSIYIYSKARLQQPFSQNNETVRTLLNRTKEFQSFIILSSANCFRMGPFKGLKYYKELDPIIPIKNSSGPFGTSLQIANFYSFYRLITQDKILVTNYLQLDNLKQTFWVMKYYFIDDNRKIYNPDPVSNIVLNSFKLNWYCLHHNYYEETSARMGLGQFLCENVCLAKNGPRLKAGQVLIVQVDSVVIRAAKPYLATPGATVHGHYGEIIYEGDTLVTFIYEKSRSGDITQGLPKVEQVLEVRSLESISMNLERRIDAWNERITGILGLPWGFVVGAELTIVQSRISLVNKIQKVYRSQGVQIHNRHLEIIVHQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEVISYRAVLVGITRASLNTHSFISEASFQETARVLAKAALRGRIDWLKGLKENVVLGGKIPVGTGFKGLVHPSSQHKSIPLKNKKKNLFEGEINDILFYYREFFNIEFLCFKNYQ

Annotated regions:
phrase: HAVEKLRQSIEIWYATSEHLRQEMNPNFRMTDPYNPVHMMSFSGARGNASQVHQLVGMRGLMSDP
type: DOMAIN
name: RNA_pol_Rpb1_4
description: RNA polymerase Rpb1, domain 4

phrase: GLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHVVVRRRDCGTTRGISVSPQTGTIPEILFIQTLIGRVLADDIYKGPRCIAARNQDIGVGLVNRLITFRVQTISIRTPFTCRSTSWICRLCYGRSPTHGDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAVHVRAPSNGKIKFNEDLVHPTRTRHGHPAFLCYIDLAVTIESEDIIHNVNIPPKSFLLVQKDQYVESEQVIAEIRAGTSTLNFKEKVRKHIYSDSQGEMHWSTDVDHAPEFTYGNVHLLPKTSHLWILAGRPHKSRVATRSL
type: DOMAIN
name: RNA_pol_Rpb1_5
description: RNA polymerase Rpb1, domain 5

phrase: TIVQSRISLVNKIQKVYRSQGVQIHNRHLEIIVHQITSKVLVSEDGMSNVFLPGELIGLLRAERTGRALEEVISYRAVLV
type: DOMAIN
name: RNA_pol_Rpb1_5
description: RNA polymerase Rpb1, domain 5
Protein sequence:
MARPDDEEGAAVAPGHPLAKGYLPLPRGAPVGKESVELQNGPKAGTFPVNGAPRDSLAAASGVLGGPQTPLAPEEETQARLLPAGAGAETPGAESSPLPLTALSPRRFVVLLIFSLYSLVNAFQWIQYSIISNVFEGFYGVTLLHIDWLSMVYMLAYVPLIFPATWLLDTRGLRLTALLGSGLNCLGAWIKCGSVQQHLFWVTMLGQCLCSVAQVFILGLPSRIASVWFGPKEVSTACATAVLGNQLGTAVGFLLPPVLVPNTQNDTNLLACNISTMFYGTSAVATLLFILTAIAFKEKPRYPPSQAQAALQDSPPEEYSYKKSIRNLFKNIPFVLLLITYGIMTGAFYSVSTLLNQMILTYYEGEEVNAGRIGLTLVVAGMVGSILCGLWLDYTKTYKQTTLIVYILSFIGMVIFTFTLDLRYIIIVFVTGGVLGFFMTGYLPLGFEFAVEITYPESEGTSSGLLNASAQIFGILFTLAQGKLTSDYGPKAGNIFLCVWMFIGIILTALIKSDLRRHNINIGITNVDVKAIPADSPTDQEPKTVMLSKQSESAI

Annotated regions:
phrase: VLLIFSLYSLVNAFQWIQYSIISNVFEGFYGVTLLHIDWLSMVYMLAYVPLIFPATWLLDTRGLRLTALLGSGLNCLGAWIKCGSVQQHLFWVTMLGQCLCSVAQVFILGLPSRIASVWFGPKEVSTACATAVLGNQLGTAVGFLLPPVLVPNTQNDTNLLACNISTMFYGTSAVATLLFILTAIAFKEKPRYPPSQAQAALQDSPPEEYSYKKSIRNLFKNIPFVLLLITYGIMTGAFYSVSTLLNQMILTYYEGEEVNAGRIGLTLVVAGMVGSILCGLWLDYTKTYKQTTLIVYILSFIGMVIFTFTLDLRYIIIVFVTGGVLGFFMTGYLPLGFEFAVEITYPESEGTSSGLLNASAQIFGILFTLAQGKLTSDYGPKAGNIFLCVWMFIGIILTALIKSDL
type: DOMAIN
name: MFS_dom
description: Major facilitator superfamily domain