nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTASHGQAAAIPTVTLNDDNTLPVVGIGVGELSDSEAERSVSAALEAGYRLIDTAAAYGNEAAVGRAIAASGIPRDEIYVTTKLATPDQGFTSSQAAARASLERLGLDYVDLYLIHWPGGDTSKYVDSWGGLMKVKEDGIARSIGVCNFGAEDLETIVSLTYFTPAVNQIELHPLLNQAALREVNAGYNIVTEAYGPLGVGRLLDHPAVTAIAEAHGRTAAQVLLRWSIQLGNVVISRSANPERIASNLDVFGFELTADEMETLNGLDDGTRFRPDPATYTGS

Annotated regions:
phrase: GYRLIDTAAAYGNEAAV
type: CONSERVED_SITE
name: Aldo/ket_reductase_CS
description: Aldo/keto reductase, conserved site

phrase: VGELSDSEAERSVSAALEAGYRLIDTAAAYGNEAAVGRAIAASGIPRDEIYVTTKLATPDQGFTSSQAAARASLERLGLDYVDLYLIHWPGGDTSKYVDSWGGLMKVKEDGIARSIGVCNFGAEDLETIVSLTYFTPAVNQIELHPLLNQAALREVNAGYNIVTEAYGPLGVGRLLDHPAVTAIAEAHGRTAAQVLLRWSIQLGNVVISRSANPERIASNLDVFGFELTADEMETLNGL
type: DOMAIN
name: NADP_OxRdtase_dom
description: NADP-dependent oxidoreductase domain

phrase: LMKVKEDGIARSIGVCN
type: CONSERVED_SITE
name: Aldo/ket_reductase_CS
description: Aldo/keto reductase, conserved site
Protein sequence:
MKVAVVGATGLVGSKVLQVLAERNFPVTEIIPVASERSVGKEIDFKGKKYKVVGMEEGIAAKPALAIFSAGGGTSLEWAPKFAEAGITVIDNSSSWRMDPTKKLVVPEINADVLTREDKIIANPNCSTIQMVVALNPLHKKYKITRIVVSTYQSVTGTGKKAVDQLRAEREKEVKGVHGEYTMAYTYPIDLNAIPQIDVFLENGYTREEMKMVNETKKIMRDDSIRLTATTVRIPVMGGHSESVNVEFENEYDIDHVKELLRNAPGVVLVDDPATQKYPMPMHAHEKDEVFAGRLRRDETQPKTLNMWVVSDNLRKGAATNTVQIAEYLLAKNLLENPINFEANSSIGTRG

Annotated regions:
phrase: LNPLHKKYKITRIVVSTYQSVTGTGKKAVDQLRAEREKEVKGVHGEYTMAYTYPIDLNAIPQIDVFLENGYTREEMKMVNETKKIMRDDSIRLTATTVRIPVMGGHSESVNVEFENEYDIDHVKELLRNAPGVVLVDDPATQKYPMPMHAHEKDEVFAGRLRRDETQPKTLNMWVVSDNLR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: KVAVVGATGLVGSKVLQVLAERNFPVTEIIPVASERSVGKEIDFKGKKYKVVGMEEGIAAKPALAIFSAGGGTSLEWAPKFAEAGITVIDNSSSWRMDPTKKLVVPEINADVLTR
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: KVAVVGATGLVGSKVLQVLAERNFPVTEIIPVASERSVGKEIDFKGKKYKVVGMEEGIAAKPALAIFSAGGGTSLEWAPKFAEAGITVIDNSSSWRMDPTKKLVVPEINADV
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MEHKEIVIGVDIGSRKICAIVAEFKDGILRIIGTAHQDSKEINSKAIKRGRINSLAHASNAIKEVINSAKKMAGLNADEDRNNPISSFRESYHPKTKAIVSFSGAYTESIRDVTGVASTKDNVVTIDEINRAINNACAKAGLDNDKHILHALPYRFTLDKQEVNDPLGMSGTRLEVFIHIVYTEKNNIENLEKIMIQSGVEIENIVINSYAASIATLSNDERELGVACVDMGGETCNLTIYSGNSIRYNKYLPVGSHHLTTDLSHMLNTPFPYAEEVKIKYGDLSFESGAETPSQSVQIPTTGSDGHESHIVPLSEIQTIMRERALETFKIIHRSIQDSGFEEHLGGGVVLTGGMALMKGIKELARTHFTNYPVRLATPVEKYNIMGMFEDLKDPRFSVVVGLILYKAGGHTNYERDSKGIIRYHESDDYIRKAHQSNPTPHIHSSPTERNLSDLKTPSAPLNTAKNDDFLPIKPTEQKGFFQNLLDKISKIF

Annotated regions:
phrase: TESIRDVTGVASTKDNVVTIDEINRAINNACAKAGLDNDKHILHALPYRFTLDKQEVNDPLGMSGTRLEVFIHI
type: DOMAIN
name: SHS2_FtsA
description: SHS2 domain inserted in FtsA

phrase: VIGVDIGSRKICAIVAEFKDGILRIIGTAHQDSKEINSKAIKRGRINSLAHASNAIKEVINSAKKMAGLNADEDRNNPISSFRESYHPKTKAIVSFSGAYTESIRDVTGVASTKDNVVTIDEINRAINNACAKAGLDNDKHILHALPYRFTLDKQEVNDPLGMSGTRLEVFIHIVYTEKNNIENLEKIMIQSGVEIENIVINSYAASIA
type: DOMAIN
name: SHS2_FtsA
description: SHS2 domain inserted in FtsA
Protein sequence:
MALDNKFVAKGLRLYSARSVANRTKTFVAKKNKVVAPKKVVAPVTPVEKTFGKGKRVIAAKASKFAPSIPAEIRSTAAKKVQQKVALRKSITPGTVLIILAGRFAGKRVVALKQLDSGLILITGPFKVNGVPLRRIDQRYVIATSTKIDVSSVKVAATINDAYFAAEKKSTTKSEGAFFSDEKKAEKKKIADSRVADQKSVDSAILAVLKKEKFLTVYLKTKFYLKKGEFPHQLKF

Annotated regions:
phrase: LRKSITPGTVLIILAGRFAGKRVVALKQLDSGLILITGPFKVNGVPLRRIDQRYVIATSTKIDVSSVKVAATINDAYFAAEKKSTTKSEGAFFSDEKKAEKKKIADSRVADQKSVDSAILAVLKKEKFLTVYLKTKFYLKKGEFPHQLK
type: DOMAIN
name: Ribosomal_eL6_KOW
description: Large ribosomal subunit protein eL6, KOW domain

phrase: NGVPLRRIDQRYVIATST
type: CONSERVED_SITE
name: Ribosomal_eL6_CS
description: Large ribosomal subunit protein eL6, conserved site
Protein sequence:
MAFKIASSPHVSTTLHTNTVMKRVALCLIPGIAVQSYYFGYGTLVQLLLAITVAYLAEAAVMKLRNRNITATLTDNSALVTASLLAVAIPPLAPWWLIVIGTLFAIVIVKQLYGGLGNNVFNPAMAAYVLLLISFPVQMTSWVAPQTLTVNYADMLHTFNSIFQLNAGYAADFFHLAIDGTTMATPLDTLKTDLSMGLTTTESMTKTIFSGSVGEGWFWVNMAYLVGGLVMLKLKVIRWHISGAIVLTLFVCASIGFLISPDTFVSPIMHLFSGGTMLAAFFIATDPVTAATSPRGRLIFGAMIGLLIYLIRTFGGYPDAVAFAVLLANMCAPFIDYYVRPRSYGHRVGN

Annotated regions:
Protein sequence:
MNISALQKERAKYQPKLPKSLVGAVKLVEGAKTQSVADQKDIEKLFPNTYGMPLITFEEGEVKKDRPAINVGVILSGGQAPGGHNVISGIFDGIKKINQESRLYGFLGGPGGLVDHKYVELTAEIIDEYRNTGGFDIIGSGRTKLEEEWQFDKGLEIANDLNLNALVIIGGDDSNTNACVLAEYYAAKDAGVQVIGCPKTIDGDLKNEMIETSFGFDTATKVYSELIGNIQRDANSAKKYWHFIKLMGRSASHIGLECALKTQPNITLISEEVADKKQTLEEIVEYMAGIVAKRAENGDNFGVALIPEGLIEFIPEMKVLISELNDMLAEGSETEKEFKMLKKSHRNEWVAGHLTDDSAKVFKSLPSGIATQLTLDRDPHGNVQVSLIETEKLLGEMVKTKLEKMKKAGEYVGKFGTQYHFFGYEGRCAAPSNFDADYCYSLGYTASVLISDGKTGYMSSVRNLTSPAEEWIAGGVPVTTMMNMEKRHGHMKPVIQKALVELEGAPYKYFVSKRGEWAFTTQFVYPGPIQYFGPSEVCDLTTETLKFEKA

Annotated regions:
phrase: NVGVILSGGQAPGGHNVISGIFDGIKKINQESRLYGFLGGPGGLVDHKYVELTAEIIDEYRNTGGFDIIGSGRTKLEEEWQFDKGLEIANDLNLNALVIIGGDDSNTNACVLAEYYAAKDAGVQVIGCPKTIDGDLKNEMIETSFGFDTATKVYSELIGNIQRDANSAKKYWHFIKLMGRSASHIGLECALKTQPNITLISEEVADKKQTLEEIVEYMAGIVAKRAENGDNFGVALIPEGLIEFIPEMKVLISELNDMLAEGSETE
type: DOMAIN
name: Phosphofructokinase_dom
description: Phosphofructokinase domain
Protein sequence:
MRNDIVKIVDRIIQGGRLSEAEGRSILQAGGASLGWVMAGAQQLRETYCGDGVGLCMIVNAKSGHCSEDCRFCAQSSHYHTGAPVFPLKTAEQIVAEAQCADSRGARCFGIVTSGARVLPGAELESILAALREIRETTRIAPSASLGLLDEETARALADAGCVTYHHNLETARSYFPHICTTHDYDQDLETVRVAKAAGMKVCCGGLFGLGETPEQRLELGLTLRELDIDSVPINFLNPVAGTPLADATPLEPMEALKIIALYRYLMPDRHITVCGGRGVTLGDFQSWIFQAGASGMMVGDYLTTAGRQLSDDLRMVTDAGLTYERC

Annotated regions:
phrase: PINFLNPVAGTPLADATPLEPMEALKIIALYRYLMPDRHITVCGGRGVTLGDFQSWIFQAGASGMMVGDYLTTAGRQLSDDLRMVTDAGLT
type: DOMAIN
name: BATS_dom
description: Biotin and thiamin synthesis-associated domain

phrase: HCSEDCRFCAQSSHYHTGAPVFPLKTAEQIVAEAQCADSRGARCFGIVTSGARVLPGAELESILAALREIRETTRIAPSASLGLLDEETARALADAGCVTYHHNLETARSYFPHICTTHDYDQDLETVRVAKAAGMKVCCGGLFGLGETPEQRL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: PINFLNPVAGTPLADATPLEPMEALKIIALYRYLMPDRHITVCGGRGVTLGDFQSWIFQAGASGMMVGDYLTTAGRQLSDDLRMVTDAG
type: DOMAIN
name: BATS_dom
description: Biotin and thiamin synthesis-associated domain

phrase: YCGDGVGLCMIVNAKSGHCSEDCRFCAQSSHYHTGAPVFPLKTAEQIVAEAQCADSRGARCFGIVTSGARVLPGAELESILAALREIRETTRIAPSASLGLLDEETARALADAGCVTYHHNLETARSYFPHICTTHDYDQDLETVRVAKAAGMKVCCGGLFGLGETPEQRLELGLTLRELDIDSVPINFLNPVAGTPLADATPLEPMEALKIIALYRYLMPDRHITVCGG
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: CMIVNAKSGHCSEDCRFCAQSSHYHTGAPVFPLKTAEQIVAEAQCADSRGARCFGIVTSGARVLPGAELESILAALREIRETTRIAPSASLGLLDEETARALADAGCVTYHHNLETARSYFPHICTTHDYDQDLETVRVAKAAGMKVCCGGLFGLGETPEQRLELGLTLRELDIDSVPINFLNPVAGTPLADATPLEPMEALKIIALYR
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain
Protein sequence:
MRNLRLGTRGSQLALWQARHVASLLESSIPDLKVEIKTIKTTGDKILDVALSKIGDKGLFTKEIEKELLDGEIDIAVHSMKDLPSELPPGLCIAAVLEREDPRDVLLSHKNYSLADLPQAALIGTSSLRRIAQLKAWRPDLQLVDMRGNVETRIRKMKEQDLDGIILACAGVKRLGLEEMISDYLPAHLVLPAVGQGMIAVEARSDEQDVLKLLSRINHQDSFLAGQAERGFLHELGGGCQVPVASLAELQGGQLHIRGLIASLDGKEKYSGSSDCSPPEAEEAGRELARSLLQQGGAAILCETRK

Annotated regions:
phrase: ERGFLHELGGGCQVPV
type: BINDING_SITE
name: Porphobilin_deaminase_cofac_BS
description: Porphobilinogen deaminase, dipyrromethane cofactor binding site

phrase: LRLGTRGSQLALWQARHVASLLESSIPDLKVEIKTIKTTGDKILDVALSKIGDKGLFTKEIEKELLDGEIDIAVHSMKDLPSELPPGLCIAAVLEREDPRDVLLSHKNYSLADLPQAALIGTSSLRRIAQLKAWRPDLQLVDMRGNVETRIRKMKEQDLDGIILACAGVKRLGLEEMISDYLPAHLVLPAVGQGMIAVEARSDEQDV
type: DOMAIN
name: Porphobilin_deaminase_N
description: Porphobilinogen deaminase, N-terminal

phrase: QAERGFLHELGGGCQVPVASLAELQGGQLHIRGLIASLDGKEKYSGSSDCSPPEAEEAGRELARSL
type: DOMAIN
name: Porphobilinogen_deaminase_C
description: Porphobilinogen deaminase, C-terminal
Protein sequence:
MKPKVVAIVPAGGSGRRMQSSNPKQYFLINGMPVLVHTLLRLQQFPLIDEILLVVPHSDMVFVRDNIEKPYQLTKIRGIVAGGRERQDSVRNGLKCVVEKDEIVVIHDGVRPFVTEKILSRVIDAAHRSGAAIAAVPAMDTVKEVHSDGHISVTLDRKRIWLAQTPQAFHRRIIQEAYKKAVQDDYYGTDDASLVERLGIPVEVVPGSCTNIKITTPDDLILAEAFLKKEEGRI

Annotated regions:
phrase: VVIHDGV
type: CONSERVED_SITE
name: ISPD_synthase_CS
description: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site
Protein sequence:
MSRFTGPRLKIMRALGVDLPGLSRKTIASRPTPPGQHGAKLVRRRKSDFGIKLQEKQKLRFNYGLSERQLRHLMLNARKSTEPTGETLLQLLERRLDNVVFRAGFAPTVIAARQLVSHRHVRLNGKPVNIPSIRLNVGDEITIKPESLNLPIVLGTLQDLPLSRPEWLLWDEKDKTGKITHLPTAEDVPFPIDVQQVVEYYANRM

Annotated regions:
phrase: LERRLDNVVFRAGFAPTVIAARQL
type: CONSERVED_SITE
name: Ribosomal_uS4_CS
description: Small ribosomal subunit protein uS4, conserved site

phrase: RFTGPRLKIMRALGVDLPGLSRKTIASRPTPPGQHGAKLVRRRKSDFGIKLQEKQKLRFNYGLSERQLRHLMLNARKSTEPTGETLLQLL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: RRLDNVVFRAGFAPTVIAARQLVSHRHVRLNGKPVNIPSIRLNVGDEITIKPESLNLPIVLG
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: RRLDNVVFRAGFAPTVIAARQLVSHRHVRLNGKPVNIPSIRLNVGDE
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: RFTGPRLKIMRALGVDLPGLSRKTIASRPTPPGQHGAKLVRRRKSDFGIKLQEKQKLRFNYGLSERQLRHLMLNARKSTEPTGETLLQLL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal
Protein sequence:
MAGYKPVAIQTYPILGEKITQDTLYWNNYKTPVQIKEFGAVSKVDFSPQPPYNYAVTASSRIHIYGRYSQEPIKTFSRFKDTAYCATFRQDGRLLVAGSEDGGVQLFDISGRAPLRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLWDIPNSKEILTFKEHSDYVRCGCASKLNPDLFITGSYDHTVKMFDARTSESVLSVEHGQPVESVLLFPSGGLLVSAGGRYVKVWDMLKGGQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVHSFDYAASILSLALAHEDETIVVGMTNGILSVKHRKSEAKKESLPRRRRPAYRTFIKGKNYMKQRDDILINRPAKKHLELYDRDLKHFRISKALDRVLDPTCTIKTPEITVSIIKELNRRGVLANALAGRDEKEISHVLNFLIRNLSQPRFAPVLINAAEIIIDIYLPVIGQSPVVDKKFLLLQGLVEKEIDYQRELLETLGMMDMLFATMRRKEGTSVLEHTSDGFPENKKIES

Annotated regions:
phrase: NYMKQRDDILINRPAKKHLELYDRDLKHFRISKALDRVLDPTCTIKTPEITVSIIKELNRRGVLANALAGRDEKEISHVLNFLIRNLSQPRFAPVLINAAEIIIDIYLPVIGQSPVVDKKFLLLQGLVEKEIDYQRELLETLGMMDM
type: DOMAIN
name: U3_snoRNA-assocProt_15_C
description: U3 small nucleolar RNA-associated protein 15, C-terminal

phrase: KEILTFKEHSDYVRCGCASKLNPDLFITGSYDHTVKMF
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: GQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVY
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: PLRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: EPIKTFSRFKDTAYCATFRQDGRLLVAGSEDGGVQLF
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: EHGQPVESVLLFPSGGLLVSAGGRYVKVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: FEGHTKAVHTVDFTADKYHVVSGADDYTVKLWDIPNSKEIL
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: VVSGADDYTVKLWD
type: CONSERVED_SITE
name: WD40_repeat_CS
description: WD40 repeat, conserved site

phrase: LKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYSTTSYKVVH
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: NSKEILTFKEHSDYVRCGCASKLNPDLFITGSYDHTVKMF
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: SQEPIKTFSRFKDTAYCATFRQDGRLLVAGSEDGGVQLF
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: GGQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVY
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: GRAPLRQFEGHTKAVHTVDFTADKYHVVSGADDYTVKLW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: TPVQIKEFGAVSKVDFSPQPPYNYAVTASSRIHIY
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: TSESVLSVEHGQPVESVLLFPSGGLLVSAGGRYVKVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat
Protein sequence:
MPGIKVFGETVLRGSVRVSGAKNATTKLLVASLLSDQRTILKNVPNIEDVRQTVDLCRVLGAIVEWDQQAQVIEIHTPRILLSKVPPQFSCVNRIPILLLGALLRRCPYGIFVPILGGDAIGPRTLHFHLEGLKKLGAEIVISDEGYWASAPNGLVGAHITLPYPSVGATENLILASVGAQGRTIIKNAALEVEIIDLIVFLQKAGMEITTDNDKTIEIFGCQDFYSVEHSIIPDKIEAASFGMAAVVSQGRIFVEQARHEHMIPFLKVLRSIGGGFSVHENGIEFFYDKPLKGGVLLETDVHPGFITDWQQPFAVLLSQSEGCSVIHETVHENRLGYLKGLVKMGAHCDLFHECLSAKSCRYSTGNHPHSAVIHGPTPLQATDLVIPDLRAGFAYVMAALITEGGASWIENTEMLDRGYTDWRGKLERLGAKVLARDSVSVYV

Annotated regions:
phrase: TVLRGSVRVSGAKNATTKLLVASLLSDQRTILKNVPNIEDVRQTVDLCRVLGAIVEWDQQAQVIEIHTPRILLSKVPPQFSCVNRIPILLLGALLRRCPYGIFVPILGGDAIGPRTLHFHLEGLKKLGAEIVISDEGYWASAPNGLVGAHITLPYPSVGATENLILASVGAQGRTIIKNAALEVEIIDLIVFLQKAGMEITTDNDKTIEIFGCQDFYSVEHSIIPDKIEAASFGMAAVVSQGRIFVEQARHEHMIPFLKVLRSIGGGFSVHENGIEFFYDKPLKGGVLLETDVHPGFITDWQQPFAVLLSQSEGCSVIHETVHENRLGYLKGLVKMGAHCDLFHECLSAKSCRYSTGNHPHSAVIHGPTPLQATDLVIPDLRAGFAYVMAALITEGGASWIENTEMLDRGYTDWRGK
type: DOMAIN
name: Enolpyruvate_Tfrase_dom
description: Enolpyruvate transferase domain
Protein sequence:
MAKTSMKAREAKRAQLVAKYAEKRAALKTIIASPASSDEDRWDAVLKLQALPRDSSAARQRNRCNQTGRPHGFLRKFGLSRIKLREATMRGEVPGLRKASW

Annotated regions:
phrase: RCNQTGRPHGFLRKFGLSRIKL
type: CONSERVED_SITE
name: Ribosomal_uS14_CS
description: Small ribosomal subunit protein uS14, conserved site
Protein sequence:
MSGKIKVTFIINDGEEKTVEAPIGLSILEIAHSNDLDLEGACEGSLACATCHVILEEEFYNKLKKPTEAEEDMLDLAFGLTDTSRLGCQIILTEELDGIKVHLPAATRNIKL

Annotated regions:
phrase: CEGSLACATC
type: BINDING_SITE
name: Adrenodoxin_Fe-S_BS
description: Adrenodoxin, iron-sulphur binding site

phrase: IKVTFIINDGEEKTVEAPIGLSILEIAHSNDLDLEGACEGSLACATCHVILEEEFYNKLKKPTEAEEDMLDLAFGLTDTSRLGCQIILTEELDGIKVHLPAA
type: DOMAIN
name: 2Fe-2S_ferredoxin-type
description: 2Fe-2S ferredoxin-type iron-sulfur binding domain

phrase: NDGEEKTVEAPIGLSILEIAHSNDLDLEGACEGSLACATCHVILEEEFYNKLKKPTEAEEDMLDLAFGLTDTSRLGCQII
type: DOMAIN
name: 2Fe-2S_ferredoxin-type
description: 2Fe-2S ferredoxin-type iron-sulfur binding domain

phrase: VTFIINDGEEKTVEAPIGLSILEIAHSNDLDLEGACEGSLACATCHVILEEEFYNKLKKPTEAEEDMLDLAFGLTDTSRLGCQIILTEE
type: DOMAIN
name: 2Fe-2S_ferredoxin-type
description: 2Fe-2S ferredoxin-type iron-sulfur binding domain
Protein sequence:
MTAPHDPLDDIQADPWALWLSGRTRTALELPHYRRAAVLVALTREADPRVLLTVRSSELPTHKGQIAFPGGSLDAGETPTQAALREAQEEVALDPAAVTLLGELDDVFTPVGFHVTPVLGRIAPEALDTLRVTPEVAQIITPTLAELRAVPLVRERRTLPDGTEVPLYRYPWRGLDIWGMTARVLHDLLEQGPG

Annotated regions:
phrase: RRAAVLVALTREADPRVLLTVRSSELPTHKGQIAFPGGSLDAGETPTQAALREAQEEVALDPAAVTLLGELDDVFTPVGFHVTPVLGR
type: DOMAIN
name: NUDIX_hydrolase_dom
description: NUDIX hydrolase domain

phrase: YRRAAVLVALTREADPRVLLTVRSSELPTHKGQIAFPGGSLDAGETPTQAALREAQEEVALDPAAVTLLGELDDVFTPVGFHVTPVLGRIAPEALDTLRVTPEVAQIITPTLAELRAVPLVRERRTLPDGTEVPLYRYPWRGLDIWGM
type: DOMAIN
name: NUDIX_hydrolase_dom
description: NUDIX hydrolase domain
Protein sequence:
MSKDDVIQMQGEVLENLPNATFRVKLENGHVVLGHISGKMRMHYIRILPGDKVTVELTPYDLTRARIVFRSK

Annotated regions:
phrase: MSKDDVIQMQGEVLENLPNATFRVKLENGHVVLGHISGKMRMHYIRILPGDKVTVELTPYDLTRARIVFRS
type: DOMAIN
name: RNA-binding_domain_S1_IF1
description: RNA-binding domain, S1, IF1 type

phrase: IQMQGEVLENLPNATFRVKLENGHVVLGHISGKMRMHYIRILPGDKVTVELTPYDLTRARIVF
type: DOMAIN
name: RNA-binding_domain_S1_IF1
description: RNA-binding domain, S1, IF1 type
Protein sequence:
MSTSDAAATVIPIDDVPRQHGKAPAVDTVTAAPPPLAAAAPPAATTAPRKTRVPFFRRADRGSRCVALLDLVLRVAAFGPALAAAIATGTSDETLSVFTQFFQFHARFDDFPALLFFMVANAIAAGYLVLSLPFSAVVVLRPQAIGLRHLLLICDLIIAALLTAAAAAAAAIVDLAHSGNQRANWVPICMQFHGFCQRTSGAVVASFLAVLVLLFLVILAAFTIRKRC

Annotated regions:
phrase: CVALLDLVLRVAAFGPALAAAIATGTSDETLSVFTQFFQFHARFDDFPALLFFMVANAIAAGYLVLSLPFSAVVVLRPQAIGLRHLLLICDLIIAALLTAAAAAAAAIVDLAHSGNQRANWVPICMQFHGFCQRTSGAVVASFLAV
type: DOMAIN
name: CASP_dom
description: Casparian strip membrane protein domain
Protein sequence:
MTSQRTRERLIQRLYDEGLSNPQVLEVIRRTPRHLFVDEALAHRAYEDTALPIGHNQTISQPYMVARMSELLLAAGPLDKVLEIGTGSGYQTAVLSQLVERVFSVERIKVLQDRAKERLQELNLRNVVFRWGDGWEGWPALAPYNGIIVTAVATDIPQALLDQLAPGGRLVIPVGAGEVQQLMLIIREEQGFARHVLGAVRFVPLLNGPLA

Annotated regions:
Protein sequence:
MADEIAKAQVARPGGDTIFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDNESLLGHLMIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMHWPPG

Annotated regions:
phrase: RKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDNESLLGHLMIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGR
type: DOMAIN
name: HIT-like
description: HIT-like domain

phrase: IFGKIIRKEIPAKIIFEDDRCLAFHDISPQAPTHFLVIPKKHISQISVAEDDNESLLGHLMIVGKKCAADLGLNKGYRMVVNEGSDGGQSVYHVHLHVLGGRQMHWPP
type: DOMAIN
name: HIT-like
description: HIT-like domain

phrase: NEGSDGGQSVYHVHLHVL
type: CONSERVED_SITE
name: Histidine_triad_CS
description: Histidine triad, conserved site
Protein sequence:
MAFRENVLEILEEITETDEVVQNTNIKLFDEGLLDSMATVQLLIEIEEKLDITVPVSEFDRDEWATPEMIITQLEALK

Annotated regions:
phrase: MAFRENVLEILEEITETDEVVQNTNIKLFDEGLLDSMATVQLLIEIEEKLDITVPVSEFDRDEWATPEMIITQLEAL
type: DOMAIN
name: PP-bd_ACP
description: Phosphopantetheine binding ACP domain

phrase: VLEILEEITETDEVVQNTNIKLFDEGLLDSMATVQLLIEIEEKLDITVPVSEFDRDEWATPEMI
type: DOMAIN
name: PP-bd_ACP
description: Phosphopantetheine binding ACP domain
Protein sequence:
MTKSKPATKKNEWTVKDSCSLYGLDLWGEEYFSINDSGNVTVSPQGKEGNSLELTHLLEELKGRNLNTPLLLRFDDILEDRLKKLHQAFENAINQYGYNNDYQGVFPIKCNQQRHVVEEIVTIGRKWHFGLEAGSKAELLIALALVNDPKAFLICNGYKDNRYIETTILARQLGRQPIVVIEQSDEVGRIIKASQKLGAAPLIGIRAKLSNQSSGRWGNSVGEKSKFGLSIPEILKAVQELTAAGLLNELILLHFHVGSQINDIAILKNALQEASQIYVELNRLGAPMGHLDVGGGLGVDYDGSRTATSASTNYSLQNYANDVVATIQECCKAKKVKVPKLISESGRFLSSHFSILIFNVLGTSSVPTQIAIETSNECLSVKNLRETLMILHQICEEKKIDVSKLQEAWNDALKFKEDALNAFRLGFIDLTERATAEQLTWACAKQIAAHLPNDLKIPKELLAINKGLTETYYANISIFRSAPDTWAIQQLFPLLPIHRLQEKPDQLGHFADLTCDSDGKLARFINNGQEKFLLELHTVKANENYWIGMFLGGAYQEVMGNLHNLFGSTNAIHIRLTKNGKYKLDHVVRGNSKSDVLQAMEHDSEQLLERIRMASESAIQQGSLKINDAQRLIEHVETSLRQSTYLQE

Annotated regions:
phrase: DVLQAMEHDSEQLLERIRMASESAIQQGSLKINDAQRLIEHVETSLRQSTY
type: DOMAIN
name: Arg_decarbox_C
description: Arginine decarboxylase, C-terminal helical

phrase: KLHQAFENAINQYGYNNDYQGVFPIKCNQQRHVVEEIVTIGRKWHFGLEAGSKAELLIALALVNDPKAFLICNGYKDNRYIETTILARQLGRQPIVVIEQSDEVGRIIKASQKLGAAPLIGIRAKLSNQSSGRWGNSVGEKSKFGLSIPEILKAVQELTAAGLLNELILLHFHVGSQINDIAILKNALQEASQIYVELNRLGAPMGHLDVGGGLGVDYDGSRTATSASTNYSLQNYANDVVATIQECCKAKKVKVPKLISESGRFL
type: DOMAIN
name: De-COase2_N
description: Orn/DAP/Arg decarboxylase 2, N-terminal

phrase: LHQICEEKKIDVSKLQEAWNDALKFKEDALNAFRLGFIDLTERATAEQLTWACAKQIAAHLPNDLKIPKEL
type: DOMAIN
name: Arg_decarb_HB
description: Arginine decarboxylase, helical bundle domain

phrase: FPIKCNQQRHVVEEIVTI
type: BINDING_SITE
name: De-COase2_pyr-phos_BS
description: Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site

phrase: GAPMGHLDVGGGL
type: CONSERVED_SITE
name: De-COase2_CS
description: Orn/DAP/Arg decarboxylase 2, conserved site
Protein sequence:
MRPRPILLLLLMFLPMLPAPPPGQPSGRRRGRRSGGSGGGFWGDRVDSQPFAIPYIHPTNPFAPDVTAAAGAGPRVRQPARPLGSAWRDQAQRPAVASRRRPTTAGAAPLTAVAPAHDTPPVPDVDSRAAILRRQYNLSTSPLTSSVATGTNLVLYAAPLSPLLPLQDGTNTHIMATEASNYAQYRVVRATIRYRPLVPNAVGGYAISISFWPQTTTTPTSVDMNSITSTDVRILVQPGIASELVIPSERLHYRNQGWRSVETSGVAEEEATSGLVMLCIHGSPVNSYTNTPYTGALGLLDFALELEFRNLTPGNTNTRVSRYSSTARHRLRRGADGTAELTTTAATRFMKDLYFTSTNGVGEIGRGIALTLFNLADTLLGGLPTELISSAGGQLFYSRPVVSAHGEPTVKLYTSVENAQQDKGIAIPHDIDLGESRVVIQDYDNQHEQDRPTPSPAPSRPFSVLRANDVLWLSLTAAEYDQSTYGSSTAPVYVSDSVTLVNVATGAQAVARSLDWTKVTLDGRPLSTIQQYPKTFFVLPLRGKLSFWEAGTTKAGYPYNYNTTASDQLLVENAAGHRVAISTYTTSLGAGPVSISAVAVLAPHSALALLEDTLDYPACAHTFDDFCPECRPLGLQGCAFQSTVAELQRLKMKVGKTREL

Annotated regions:
phrase: APSRPFSVLRANDVLWLSLTAAEYDQSTYGSSTAPVYVSDSVTLVNVATGAQAVARSLDWTKVTLDGRPLSTIQQYPKT
type: DOMAIN
name: SP2_C
description: Structural protein 2, C-terminal domain

phrase: GNTNTRVSRYSSTARHRLRRGADGTAELTTTAATRFMKDLYFTSTNGVGEIGRGIALTLFNLADTLLGGLPTELISSAGGQLFYSRPVVSAHGEPTVKLYTSVENAQQDKGIAIPHDIDLGESRVVIQDYDNQHEQDR
type: DOMAIN
name: SP2_M
description: Structural protein 2, second domain

phrase: PPVPDVDSRAAILRRQYNLSTSPLTSSVATGTNLVLYAAPLSPLLPLQDGTNTHIMATEASNYAQYRVVRATIRYRPLVPNAVGGYAISISFWPQTTTTPTSVDMNSITSTDVRILVQPGIASELVIPSERLHYRNQGWRSVETSGVAEEEATSGLVMLCIHGSPVNSYTNTPYTGALGLLDFALELEFRN
type: DOMAIN
name: SP2_N
description: Hepatitis E virus structural protein 2, N-terminal domain
Protein sequence:
MTMVEHYPFKIHSDFEPQGDQPQAIEEIVEGIKAGKRHQTLLGATGTGKTFTMSNVIKEVGKPTLIIAHNKTLAGQLYSEFKEFFPENRVEYFVSYYDYYQPEAYVPSTDTFIEKDASINDEIDQLRHSATSALFERDDVIIIASVSCIYGLGNPEEYKDLVVSVRVGMEMDRSELLRKLVDVQYTRNDIDFQRGTFRVRGDVVEIFPASKEELCIRVEFFGDEIDRIREVNYLTGEVLKEREHFAIFPASHFVTREEKLKVAIERIEKELEERLKELRDENKLLEAQRLEQRTNYDLEMMREMGFCSGIENYSVHLTLRPLGSTPYTLLDYFGDDWLVMIDESHVTLPQVRGMYNGDRARKQVLVDHGFRLPSALDNRPLKFEEFEEKTKQLVYVSATPGPYEIEHTDKMVEQIIRPTGLLDPKIEVRPTENQIDDLLSEIQTRVERNERVLVTTLTKKMSEDLTTYMKEAGIKVNYLHSEIKTLERIEIIRDLRMGTYDVIVGINLLREGIDIPEVSLVVILDADKEGFLRSNRSLIQTIGRAARNDKGEVIMYADKMTDSMKYAIDETQRRREIQMKHNEKHGITPKTINKKIHDLISATVENDENNDKAQTVIPKKMTKKERQKTIDNIEKEMKQAAKDLDFEKATELRDMLFELKAEG

Annotated regions:
phrase: EPQGDQPQAIEEIVEGIKAGKRHQTLLGATGTGKTFTMSNVIKEVGKPTLIIAHNKTLAGQLYSEFKEFFPENRVEYFVS
type: DOMAIN
name: Helicase/UvrB_N
description: Helicase/UvrB, N-terminal

phrase: MYADKMTDSMKYAIDETQRRREIQMKHNEKHGITPKTINKK
type: DOMAIN
name: UvrB_YAD/RRR_dom
description: UvrB, YAD/RRR-motif-containing domain

phrase: VSVRVGMEMDRSELLRKLVDVQYTRNDIDFQRGTFRVRGDVVEIFPASKEELCIRVEFFGDEIDRIREVNYLTGEVLKEREHFAIFPASH
type: DOMAIN
name: UvrB_inter
description: UvrB, interaction domain

phrase: KTIDNIEKEMKQAAKDLDFEKATELRDMLFELK
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: QIDDLLSEIQTRVERNERVLVTTLTKKMSEDLTTYMKEAGIKVNYLHSEIKTLERIEIIRDLRMGTYDVIVGINLLREGIDIPEVSLVVILDADKEGFLRSNRSLIQTIGRAARNDKGEVIMYADKMTDSMKYAIDETQRRREIQMKHNEKHGITPKTINKKIHDL
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: EGIKAGKRHQTLLGATGTGKTFTMSNVIKEVGKPTLIIAHNKTLAGQLYSEFKEFFPENRVEYFVSYYDYYQPEAYVPSTDTFIEKDASINDEIDQLRHSATSALFERDDVIIIASVSCIYGLGNPEEYKDLVV
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: EDLTTYMKEAGIKVNYLHSEIKTLERIEIIRDLRMGTYDVIVGINLLREGIDIPEVSLVVILDADKEGFLRSNRSLIQTIGRAARN
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: SDFEPQGDQPQAIEEIVEGIKAGKRHQTLLGATGTGKTFTMSNVIKEVGKPTLIIAHNKTLAGQLYSEFKEFFPENRVEYFVSYYDYYQPEAYVPSTDTFIEKDASINDEIDQLRHSATSALFERDDVIIIASVSCIYGLGNPEEYKDLVVSVRVGMEMDRSELLRKLVDVQYTRNDIDFQRGTFRVRGDVVEIFPASKEELCIRVEFFGDEIDRIREVNYLTGEVLKEREHFAIFPASHFVTREEKLKVAIERIEKELEERLKELRDENKLLEAQRLEQRTNYDLEMMREMGFCSGIENYSVHLTLRPLGSTPYTLLDYFGDDWLVMIDESHVTLPQVRGMYNGDRARKQVLVDHGFRLPSALDNRPLKFEEFEEKTKQLVYVSATPGPYEIEHTDKMVEQIIRPTGLLDPKIEV
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: QKTIDNIEKEMKQAAKDLDFEKATELRDMLFELKA
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: DDLLSEIQTRVERNERVLVTTLTKKMSEDLTTYMKEAGIKVNYLHSEIKTLERIEIIRDLRMGTYDVIVGINLLREGIDIPEVSLVVILDADKEGFLRSNRSLIQTIGRAAR
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like
Protein sequence:
MASLLDRYLRNISDKSQQNLASVAYLASLDHLLHAFPSIGQSIVQELKSQRSRLKMIASENFSSLSVQLAMGNLLTDKYCEGSPFKRFYSCCENVDAIEWECAETAKELFGAESAFVQPHSGADANLLAIMSIITQKIQSPAVQRLGYKTINDLPEQEYEALKAEMAQHKCLGPSLNSGGHLTHGTVRMNIMSKLMHCLPYEVNLDTELFDYDEIAKIAKEHKPTVLIAGYSSYSRRLNFATLKQIAEDCGAVLWVDMAHFAGLVAGGVFVGEENPMPYADIVTTTTHKTLRGPRGGLVLAKKEYANTLNKACPLMMGGPLPHVIAAKAIALKEAMTINFRKYAHKVVENARTLAEVFQRNGLRLLTGGTDNHMLIIDLTSLGVPGRIAEDMLTSVGIAVNRNTIPSDASGQWKTSGIRLGTPALTTLGMGSAEMEEVANIIVKVLRNITVRSNAESGSSKSEGELSEGIAQEARQRVADLLGRFPLYPEIDLETLV

Annotated regions:
phrase: DIVTTTTHKTLRGPRG
type: BINDING_SITE
name: Ser_HO-MeTrfase_PLP_BS
description: Serine hydroxymethyltransferase, pyridoxal phosphate binding site

phrase: QHKCLGPSLNSGGHLTHGTVRMNIMSKLMHCLPYEVNLDTELFDYDEIAKIAKEHKPTVLIAGYSSYSRRLNFATLKQIAEDCGAVLWVDMAHFAGLVAGGVFVGEENPMPYADIVTTTTHKTLRGPRGGLVLAKKEYANTLNKACPLMMGGPLPHVIAAKAIALKEAMTINFRKYAHKVVENARTLAEVFQRNGLRLLTGGTDNHMLIIDLTSLGVPGRIAEDMLTSVGIAVNRNTIPSDASGQWKTSGIRLGTPALTTLGMGSAEMEEVANI
type: DOMAIN
name: SHMT-like_dom
description: Serine hydroxymethyltransferase-like domain

phrase: IGQSIVQELKSQRSRLKMIASENFSSLSVQLAMGNLLTDKYCEGSPFKRFYSCCENVDAIEWECAETAKELFGAESAFVQPHSGADANLLAIMSIIT
type: DOMAIN
name: SHMT-like_dom
description: Serine hydroxymethyltransferase-like domain