nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTMSDIEDSDVENYDIAGKLALRSDDELGSDDEQNTSGEEGEEVELQDEIVSSDDDDDDGDKGKDTGKMPPTKKAKLDRKPGSDFDFASLDFEAEDNEEEDKTLSSILALSNPTAKKAKAGSFASFGFSKFLLANIAKKGYKQPTPIQRRSIPLIIDNRDVVGMARTGSGKTAAFVLPLIEKLKLRSPSGVRAVILSPSRELALQTYKQVKEFSHGTNLQSIVLIGGDSLEEDFGKMMTKPDIIVCTPGRFLHLKVEMQYDLMSVQYIVFDEADRLFEMGFAEQLNELLLALPSNRQSLLFSATLPRSLVEFAKAGLTNPVLVRLDADSKLSENLQMAYFTTKRNEREANLLYILQEVIKMPLGTPEEVKKLAAMDKRSIESDEENEEAKEQNNGKKRKYKFKKERMPSAKELPSEKSTIIFVPTKHHVEYVTSLLKDAGYLVSYIYGTLDQHARKNQLYLFRIGLTKILVVTDVAARGIDIPVLANVINFTLPGSSKIFIHRVGRTARAGNKGWAYSIVNSSELPYLLDLEIFLGKKLLLTSMHEAKCELLKKKQGGSFIPPRINYTERLVVGAIPRLDLETFQELYENLLRNNYEIKVLKDVAAKGEKLYHRTRQPASQESLKRSKEILETNSWDDQHLLFGENLEKMKDDFLAKLQNRNVKETVFELKKKGVKENDSLAEFMHRRRRQLAPIQRKAQERKELLQKERLAGLSHGIEEEVLKIDGEASGYNQNVDEAELQETFELGDEAHNKKKTFKDPQFFMSHY

Annotated regions:
phrase: EYVTSLLKDAGYLVSYIYGTLDQHARKNQLYLFRIGLTKILVVTDVAARGIDIPVLANVINFTLPGSSKIFIHRVGRTARA
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: TPIQRRSIPLIIDNRDVVGMARTGSGKTAAFVLPLIEKLKLRSPSGVRAVILSPSRELALQTYKQVKEFSHGTNLQSIVLIGGDSLEEDFGKMMTKPDIIVCTPGRFLHLKVEMQYDLMSVQYIVFDEADRLFEMGFAEQLNELLLALPSNRQSLLFSATLPRSL
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: GSFASFGFSKFLLANIAKKGYKQPTPIQRRSIPLIIDNRDVVGMARTGSGKTAAFVLPLIEKLKLRSPSGVRAVILSPSRELALQTYKQVKEFSHGTNLQSIVLIGGDSLEEDFGKMMTKPDIIVCTPGRFLHLKVEMQYDLMSVQYIVFDEADRLFEMGFAEQLNELLLALPSNRQSLLFSATLPRSLVEFAKAGLTNPVLV
type: DOMAIN
name: DDX54/DBP10_DEAD-box_helicase
description: DDX54/DBP10 family, DEAD-box helicase domain

phrase: IPLIIDNRDVVGMARTGSGKTAAFVLPLIEKLKLRSPSGVRAVILSPSRELALQTYKQVKEFSHGTNLQSIVLIGGDSLEEDFGKMMTKPDIIVCTPGRFLHLKVEMQYDLMSVQYIVFDEADRLFEMGFAEQLNELLLALPSNRQSLLFSATLPRSLVEFAKAGLTNPVL
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: VFDEADRL
type: CONSERVED_SITE
name: RNA-helicase_DEAD-box_CS
description: ATP-dependent RNA helicase DEAD-box, conserved site

phrase: GYKQPTPIQRRSIPLIIDNRDVVGMARTGSGKTAAFVLPLIEKLKLRSPSGVRAVILSPSRELALQTYKQVKEFSHGTNLQSIVLIGGDSLEEDFGKMMTKPDIIVCTPGRFLHLKVEMQYDLMSVQYIVFDEADRLFEMGFAEQLNELLLALPSNRQSLLFSATLPRSLVEFAKAGLTNPVLVRLDADSKLSE
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: SEKSTIIFVPTKHHVEYVTSLLKDAGYLVSYIYGTLDQHARKNQLYLFRIGLTKILVVTDVAARGIDIPVLANVINFTLPGSSKIFIHRVGRTARA
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: GSFASFGFSKFLLANIAKKGYKQPTPIQ
type: DOMAIN
name: RNA_helicase_DEAD_Q_motif
description: RNA helicase, DEAD-box type, Q motif

phrase: GKKRKYKFKKERMPSAKELPSEKSTIIFVPTKHHVEYVTSLLKDAGYLVSYIYGTLDQHARKNQLYLFRIGLTKILVVTDVAARGIDIPVLANVINFTLPGSSKIFIHRVGRTARAGNKGWAYSIVNSSELPYLLDLEIFLGKKLLLTSMHEAKCEL
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like
Protein sequence:
MRVKGTQMIWPNLWKWGTLILGLVIICSASENLWVTVYYGVPVWRDADTTLFCASDAKAHETEVHNVWATHACVPTDPNPQEIHLENVTENFNMWKNKMAEQMQEDVISLWDQSLKPCVKLTPLCVTLNCTKANLNATSNYTTNDPKIGNITDEVKNCTFNMTTEIKDKKQKVHALFYKLDIVKMHSDSNDSEYRLINCNTSVIKQACPKISFDPIPIHYCTPAGYVILKCNDKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEEEIIIRSENLTDNAKTIIVHLNKSIEINCTRPSNNTRTSIAIGPGQMFYRTGDIIGDIRKAYCQINGTKWNEVLVQVAAKLKKHFKNKTIIFQPPSGGDLEIITHHFNCRGEFFYCNTTQLFNYTYTGNTSMEGWNETIILPCRIKQIINMWQGVGQAMYAPPISGRINCVSNITGILLTRDGGAKDANNETFRPGGGNIKDNWRSELYKYKVVEIEPLGIAPTRAKRRVVEREKRAVGIGAMIFGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQRFLGLWGCSGKTICTTAVPWNSSWSNKSFEEIWNNMTWIEWEREISNYTNQIYGILTESQNQQERNEKELLELNKWASLWNWFDISNWLWYIKIFIIIVGSLIGLRIIFAVLSIVNRVRQGYSPLSSQTPTHHQREPDRPEEIEEGGGEQGRDRSVRLVSGFLALAWDDLRSLCLFSYRLLRD

Annotated regions:
phrase: MGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQRFLGLWGCSGKTICTTAVPWNSSWSNKSFEEIWNNMTWIEWEREISNYTNQIYGILTESQNQQERNEKELLELNKWASLWNWFDISNWLWYIKIFIIIVGSLIGLRIIFAVLSIVNRVRQGYSPLS
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: VQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQRFLGLWGCSGKTICTTAVPWNSSWSNKSFEEIWNNMTWIEWEREISNYTNQIYGILTESQNQQERNEKELLELN
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWRDADTTLFCASDAKAHETEVHNVWATHACVPTDPNPQEIHLENVTENFNMWKNKMAEQMQEDVISLWDQSLKPCVKLTPLCVTLNCTKANLNATSNYTTNDPKIGNITDEVKNCTFNMTTEIKDKKQKVHALFYKLDIVKMHSDSNDSEYRLINCNTSVIKQACPKISFDPIPIHYCTPAGYVILKCNDKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEEEIIIRSENLTDNAKTIIVHLNKSIEINCTRPSNNTRTSIAIGPGQMFYRTGDIIGDIRKAYCQINGTKWNEVLVQVAAKLKKHFKNKTIIFQPPSGGDLEIITHHFNCRGEFFYCNTTQLFNYTYTGNTSMEGWNETIILPCRIKQIINMWQGVGQAMYAPPISGRINCVSNITGILLTRDGGAKDANNETFRPGGGNIKDNWRSELYKYKVVEIEPLGIAPTRAKRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
SNLTHEIHFPAEFSSNPNQTHLSMLINVFRIIRKSQVAEFDQVDVWSWREKQVFDAVMVCTGHHCHPHLPLQDFPGINTFKGKFFHSRDYKNSEEWRGKRVVVIGIGNSGGDIAVELSRMAKQVYLSTRRGSWILNRVGDKGVPFDMIFNKRALLFLRLLSVGFLNKWREKQLNKRFNHKLYGLQPAHRVFSQHPTVNDDLPNRILSGTVSVKPNVEEFRWSSVVFEDGTVEDDIDLVVFATGYTFSFPFLSSHAIPASKNKVSLYKYVYPPGLEHPTLAVIGLIQPLGAIMPISEMQARWAARVFKGLCKLPPMSAMMKDIKAKEEAMATRYVAAQRHTIQVDYIPYMDELAKQVGVCPPILKLLLTDPRLALNIIFGPCTPYQFRFHGPGRWDGARQAILTQWDRVDEPLKTRCTPEPQSQRSSHSLIFSVSVAALLSALYYSRASLHALIADPSSLLDKIRAFVPLPLTTQ

Annotated regions:
Protein sequence:
MGGKWSKRSKVEWPEVRERMRQAPSAAPGVGAVSQDLDKHGAITSSNINNPSCVWLEAQEDEEVGFPVMPQVPVRPMTFKGAFDLSHFLREKGGLDGLIYSRKRQEILDLWVYNTQGYFPDWQCYTPGPGIRYPLTFGWCFKLVPVDPDEVEKETEGENNSLLHPICQHGMEDEEKEVLKWQFDSRLALKHRAYEMHPEFYKNC

Annotated regions:
Protein sequence:
MGDRGGAGGSRRRRTGSRPSSQGGGGPAAAEEEVRDVGPGGRAGAAPAPAPDKDKNGDSDVGSGHWDLRCHRLQDSLFSSDSGFSNYRGILNWCVVMLANVFAVAAFQVEKRLAVGALTEQAGLLLHVVNTILCFPAAVALLLESITPVGSVLALMAYTILFLKLFSYRDVNLWCRERRAKAKAKAAPAGKKANGGAAQRAVSYPDNLTYRDLYYFLCAPTLCYELNFPRSPRIRKRFLLRRLLEMLFLTQLQVGLIQQWMVPTIQNSMKPFKDMDYSRIIERLLKLAVPNHLIWLIFFYWFFHSCMNAVAELMQFGDREFYRDWWNSESVTYFWQNWNIPVHKWCLRHFYKPMLRRGSSKWVARTGVFFASAFFHEYLVSIPLHMFRLWAFTGMMAQIPLAWIVSRFFQGNYGNAAVWLTLIIGQPVAVLMYVHDYYVLNYEAPVAGA

Annotated regions:
Protein sequence:
MQILLASNNAKKLRELQTILDSAGIDGVEVLPLSAVDAYEEPVEDGRTFADNALIKARAGAKHAGLVTVADDSGIAVDELNGMPGVLSARWSGAHGNDEANNELLLGQMAHVPDERRAAAFVSVCALVTPEGEEHVVEGRWPGRLLRASQGEGGFGYDPLFVPTEEDEAGTGRSAGELSPEEKNAISHRGRALSQLVPVIKDLAG

Annotated regions:
Protein sequence:
MSLKLFKGMRIVLATHNPGKVPEIAALLGEDYEILTAGQLNLPEPEETETTFAGNALLKARHAADRSGEVALADDSGLSVAALDGAPGIYSARWAGPGKDFAVAMKKVEERLEEIQAADMSAWFTSALAVAWPDGPSVVVEGVVRGRLSFPPRGDRGFGYDPIFIPDEAPDDASGLTFGEMEPAAKEAISHRTRAFAKLRAALID

Annotated regions:
Protein sequence:
MEKGKDKSAGFLPPFKNFATQAIHAGQDPEQWKSLAVVPPISLATTFKQYAPGQHSGFEYSRCGNPTRDCLEKAVAALDGAKYCLAYASGLAATLNIAHLLKAGDNIVCTDDVYGGTNRYFSKMASDMGLKTVFVDCTKLESLDAAITPQTKLVWIETPTNPMLKVIDIQACAKVVHKHKGVILAVDNTFMSAYFQRPLALGADICMYSATKYMNGHSDVVMGLVSVNDDAIHERLRLLQYSLGAVPSPFDCYLCNRGLKTLPIRMKQHYQNALAVAQFLESDPRVEKVIFPGLPSHPQFEVTKRQCTGCPGMISFYIKGNLTNAATFLKNLKLFALAESLGGYESLAEHPAIMTHASVPKADRELLGITDTLIRMSIGLEDSEDLLEDLAQALKAAVPDFKICN

Annotated regions:
phrase: DICMYSATKYMNGH
type: CONSERVED_SITE
name: Cys_met_metab_PP
description: Cys/Met metabolism enzyme, pyridoxal-phosphate attachment site
Protein sequence:
MLQIKQDLLDALGQALKTMAPDSGVAAVFESPKVAAHGDFASTAAMQLAKPLKLNPRQVAENLRGLLLQAPAFARWVDAIEIAGPGFLNIRLKPEAKQQVVREVLQGADQYGMQLADSPHRMVVEFVSANPTGPLHVGHGRQAALGDAICNLFDTQGWDVWREFYYNDAGVQIQTLATSTQARAKGLKPGDAGWPEPAYNGDYIADIANDFLAKKTVKSDDREFTASGDVEDIDAIRQFAVAYLRHEQDLDLRAFSVRFDNYYLESSLYSSGRVDSAVQKLKDAGKTYEQDGALWLKSTDYGDDKDRVMKKGDGSYTYFVPDVAYHLAKWERGFSKAINIQGMDHHGTIARVRAGLQAASAGIPQGYPDYVLHTMVRVVRHGEEVKISKRAGSYVTLRDLIEWTSADAVRFFLLSRKPDTEYVFDIDLALAKNNENPVYYVQYAHARICSILGTWAAQGGDASQLKSVDLSALDGPQAQALMLLLAKYPDMLSNAAAGLAPHDVAFYLRELAACYHSYYDAERILVDDEAIKLARLALVAATAQVLHNGLKVLGVSAPHKM

Annotated regions:
phrase: RMVVEFVSANPTGPLHVGHGRQAALGDAICNLFDTQGWDVWREFYYNDAGVQIQTLATSTQARAKGLKPGDAGWPEPAYNGDYIADIANDFLAKKTVKSDDREFTASGDVEDIDAIRQFAVAYLRHEQDLDLRAFSVRFDNYYLESSLYSSGRVDSAVQKLKDAGKTYEQDGALWLKSTDYGDDKDRVMKKGDGSYTYFVPDVAYHLAKWERGFSKAINIQGMDHHGTIARVRAGLQAASAGIPQGYPDYVLHTMVRVVRHGEEVKISKRA
type: DOMAIN
name: ArgRS_core
description: Arginyl-tRNA synthetase, catalytic core domain

phrase: VQYAHARICSILGTWAAQGGDASQLKSVDLSALDGPQAQALMLLLAKYPDMLSNAAAGLAPHDVAFYLRELAACYHSYYDAERILVDDEAIKLARLALVAATAQVLHNGLKVLGVSAPHK
type: DOMAIN
name: DALR_anticod-bd
description: DALR anticodon binding

phrase: REVLQGADQYGMQLADSPHRMVVEFVSANPTGPLHVGHGRQAALGDAICNLFDTQGWDVWREFYYNDAGVQIQTLATSTQARAKGLKPGDAGWPEPAYNGDYIADIANDFLAKKTVKSDDREFTASGDVEDIDAIRQFAVAYLRHEQDLDLRAFSVRFDNYYLESSLYSSGRVDSAVQKLKDAGKTYEQDGALWLKSTDYGDDKDRVMKKGDGSYTYFVPDVAYHLAKWERGFSKAINIQGMDHHGTIARVRAGLQAASAGIPQGYPDYVLHTMVRVVRHGEEVKISKRAGSYVTLRDLIEWT
type: DOMAIN
name: ArgRS_core
description: Arginyl-tRNA synthetase, catalytic core domain

phrase: QDLLDALGQALKTMAPDSGVAAVFESPKVAAHGDFASTAAMQLAKPLKLNPRQVAENLRGLLLQAPAFARWVDAIEIAGPGFLNIR
type: DOMAIN
name: Arg-tRNA-synth_N
description: Arginyl tRNA synthetase N-terminal domain

phrase: LLDALGQALKTMAPDSGVAAVFESPKVAAHGDFASTAAMQLAKPLKLNPRQVAENLRGLLLQAPAFARWVDAIEIAGPGFLNIR
type: DOMAIN
name: Arg-tRNA-synth_N
description: Arginyl tRNA synthetase N-terminal domain

phrase: PTGPLHVGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: VQYAHARICSILGTWAAQGGDASQLKSVDLSALDGPQAQALMLLLAKYPDMLSNAAAGLAPHDVAFYLRELAACYHSYYDAERILVDDEAIKLARLALVAATAQVLHNGLKVLGVSAPHK
type: DOMAIN
name: DALR_anticod-bd
description: DALR anticodon binding
Protein sequence:
MSLTNLFKLQSSLKPSGDQPQAIQKLVNNFKQGLKEQILLGATGTGKTFTIANIIQHLQQKTLVIAHNKTLAGQLYNELKAMFPNNRVEYFISYYDYYQPEAYVASSDTYIEKDSKINDEIDQLRHSAAGSLINRDDVIVVASVSCIYGVGDLKDYQKSTLHLQIGDKYERKNLINKLIELKYQRNEINFQRGTFRVRGDIIEIIASSSKEIGIRIIFFGNEIENIQNFYVLNGKAIANLKLITLFPASLYATNNQKLQESIKRIRQELKEQINHFEKTNQLLAAQKIKMRTLHDLEMLEQIGNCNGVENYSRHLALKGKGEAPSTLIDFFGNDFLTIVDESHVTIPQIKGMYFGDFSRKNNLVNFGFRLPSALDNRPLKFNEFQEKMNKVIYLSATPGDYELTKKIPIVEQIIRPTFVLDPEIEVRPTNNQMDDLYFEIKHQTKNNQRILITTLTINMSEDLTTYLKNLGIKVAYLHSEIKSLQRLEILKDLRLGKYDCLVGVNLLREGLDLPEVALVAILDADKQGFLRNERSLIQTIGRAARNITGKAIMYADCISPAMQIAIEETYRRRKIQKQYNETMKVTPTALNKTILETISIKQKERIKNEKGKSKVQKKLQINTNMTAKNKEIKRLQKTMKEAAKALDFEKAATLRDLILDLEKKEKR

Annotated regions:
phrase: LHLQIGDKYERKNLINKLIELKYQRNEINFQRGTFRVRGDIIEIIASSSKEIGIRIIFFGNEIENIQNFYVLNGKAIANLKLITLFPASL
type: DOMAIN
name: UvrB_inter
description: UvrB, interaction domain

phrase: KEIKRLQKTMKEAAKALDFEKAATLRDLILDLE
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: NKEIKRLQKTMKEAAKALDFEKAATLRDLILDLEK
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: MYADCISPAMQIAIEETYRRRKIQKQYNETMKVTPTALNKT
type: DOMAIN
name: UvrB_YAD/RRR_dom
description: UvrB, YAD/RRR-motif-containing domain

phrase: QMDDLYFEIKHQTKNNQRILITTLTINMSEDLTTYLKNLGIKVAYLHSEIKSLQRLEILKDLRLGKYDCLVGVNLLREGLDLPEVALVAILDADKQGFLRNERSLIQTIGRAARNITGKAIMYADCISPAMQIAIEETYRRRKIQKQYNETMKVTPTALNKT
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: SSLKPSGDQPQAIQKLVNNFKQGLKEQILLGATGTGKTFTIANIIQHLQQKTLVIAHNKTLAGQLYNELKAMFPNNRVEYFISYYDYYQPEAYVASSDTYIEKDSKINDEIDQLRHSAAGSLINRDDVIVVASVSCIYGVGDLKDYQKSTLHLQIGDKYERKNLINKLIELKYQRNEINFQRGTFRVRGDIIEIIASSSKEIGIRIIFFGNEIENIQNFYVLNGKAIANLKLITLFPASLYATNNQKLQESIKRIRQELKEQINHFEKTNQLLAAQKIKMRTLHDLEMLEQIGNCNGVENYSRHLALKGKGEAPSTLIDFFGNDFLTIVDESHVTIPQIKGMYFGDFSRKNNLVNFGFRLPSALDNRPLKFNEFQEKMNKVIYLSATPGDYELTKKIPIVEQIIRPTFVLDPEIEV
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: NNFKQGLKEQILLGATGTGKTFTIANIIQHLQQKTLVIAHNKTLAGQLYNELKAMFPNNRVEYFISYYDYYQPEAYVASSDTYIEKDSKINDEIDQLRHSAAGSLINRDDVIVVASVSCIYGVGDLKDYQKSTLHLQIGDKYERKNLINKLIELKYQ
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: EIKHQTKNNQRILITTLTINMSEDLTTYLKNLGIKVAYLHSEIKSLQRLEILKDLRLGKYDCLVGVNLLREGLDLPEVALVAILDADKQGFLRNERSLIQTIGRAAR
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: EDLTTYLKNLGIKVAYLHSEIKSLQRLEILKDLRLGKYDCLVGVNLLREGLDLPEVALVAILDADKQGFLRNERSLIQTIGRAARN
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: KPSGDQPQAIQKLVNNFKQGLKEQILLGATGTGKTFTIANIIQHLQQKTLVIAHNKTLAGQLYNELKAMFPNNRVEYFIS
type: DOMAIN
name: Helicase/UvrB_N
description: Helicase/UvrB, N-terminal
Protein sequence:
MRVKGIQRNSQNLWRWGTLILGMMIICSAAENLWVTVYYGVPVWKEAETTLFCASDAKAYETEVHNVWATHACVPTDPSPQETYLENVTENFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLECYDNVTSNNGSNAINITNNMLGEVTNCSFNVTTELRDKKQKVSALFYKLDVVPLGGGNSTQYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCRDEEFNGTGPCKNVSTVQCTHGIRPVVSTQLLLNGSLAEGKVKIRSENITNNVKNIIVQFIKPVTINCTRPNNNTRTSIRIGPGQAFYATGQVTGDIRSAYCEVSKTGWNNALQMVSEQLGTYFGNKTIIFNNSTGGDIEITTHSFNCGGEFFYCNTSSLFNSTWNSSTWDNNASMQGANSTESNDTIILQCRIKQIINMWQRAGQAIYAPPIPGXISCRSNITGLILTRDGGVNNSTNETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKARRRVVQREKRAVGIGAVFIGFLGAAGSTMGAASITLTVQARKLLSGIVQQQSNLLRAIEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICTTNVPWNSSWSNKSQSEIWDNMTWLQWDKEISNYTQTIYNLIEEAQNQQEKNEQDLLSLDKWVNLWNWFDISNWLWYIKIFIMIVGGLIGLRIVFAVLSIINRVRQGYSPLSFQTHTPSPGDLDRPGRIEEEGGEQDRTRSIRLVSGFLALAWDDLRSLCLF

Annotated regions:
phrase: LWVTVYYGVPVWKEAETTLFCASDAKAYETEVHNVWATHACVPTDPSPQETYLENVTENFNMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLECYDNVTSNNGSNAINITNNMLGEVTNCSFNVTTELRDKKQKVSALFYKLDVVPLGGGNSTQYRLINCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCRDEEFNGTGPCKNVSTVQCTHGIRPVVSTQLLLNGSLAEGKVKIRSENITNNVKNIIVQFIKPVTINCTRPNNNTRTSIRIGPGQAFYATGQVTGDIRSAYCEVSKTGWNNALQMVSEQLGTYFGNKTIIFNNSTGGDIEITTHSFNCGGEFFYCNTSSLFNSTWNSSTWDNNASMQGANSTESNDTIILQCRIKQIINMWQRAGQAIYAPPIPGXISCRSNITGLILTRDGGVNNSTNETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTKARRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: VQARKLLSGIVQQQSNLLRAIEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICTTNVPWNSSWSNKSQSEIWDNMTWLQWDKEISNYTQTIYNLIEEAQNQQEKNEQDLLSLD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASITLTVQARKLLSGIVQQQSNLLRAIEAQQHLLKLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICTTNVPWNSSWSNKSQSEIWDNMTWLQWDKEISNYTQTIYNLIEEAQNQQEKNEQDLLSLDKWVNLWNWFDISNWLWYIKIFIMIVGGLIGLRIVFAVLSIINRVRQGYSPLSFQ
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MKLHNDYRLLTPRINRDKQSFLARVIITLKTSFSLDLFSGLKTALGAFFSPKVTIHYPLESAPLSPRYRAIHKLQRLLESENERCIGCGLCEKICTSNCIRIITDKGEDGRKKILNYSINFGRCIYCGLCAEVCPELAIVHGDLVENASTQRAFFGFKPQLLEHKSSLLEFGGFGSISVNADERVKTTPLSYCTQDSQNMLSESAPQENTNV

Annotated regions:
phrase: RCIGCGLCEKICTSNCIRIITDKGEDGRKKILNYSINFGRCIYCGLCAEVCP
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: RLLESENERCIGCGLCEKICTSNCIRIIT
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: LNYSINFGRCIYCGLCAEVCPELAIVHGD
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: CIYCGLCAEVC
type: CONSERVED_SITE
name: 4Fe4S_Fe_S_CS
description: 4Fe-4S ferredoxin, iron-sulphur binding, conserved site
Protein sequence:
MYGLIIDHIATYIKEKYGESTWSEVKFVSGVTDDTFQMDKKFSEGLSHKLIWACHDVTGDPVDELMTNIGTSFYKFLTKFEFNKVLRVLGRTFPQFLNGLDNLHEYLRFTFPKLKPPSFYCEHESRTGLTLHYRSKRRGFLHYVQGQIRNISQELFQTEVVIELLDIEHDLNLEHVIMRLHFNNLDFNRQGTAYRNLNDSILEKVKITSDIFFDIFPFIIVFNRGMRIRNIGIGLLRVMAGIVGKKINQTFLLMRPFIRFRWEEIMLHSNNIFELISSDPIQEDEDGILVYKTTDVDQMTEERHRMGDGEREKFLSLKGQMFYMEEWESICFVGIPVMSHLPQMYKSGLFINDFALHDSSRDLVLASTQQSAELKLLLHQEAQKSRNMRENMNRLKKERRRTDKLLYQMLPKSVANQLRHGESAVACCERFDSVTILFTDIVEFTKMCSSLTPLEVIEFLKVIYTNFDKIIDTHGVYKVETIGDAYMVVSGAPTKTEHDAEFILDCASQFLVEAGKMVNMNNKIHKIDIRAGVHSGSVVAGVVGLSMPRYCLFGETVYVANKMEQNSSPMKILVSETTHNKIEESDPGLYQFERREEIEIKDDQTIQTFFVVSRHGPHRVPSPRNCESRQDDSQTEDDDDDELLLPRKSGRKSPTSEAEEELKKKGQLSFTPVSDAGIECHSRNSNKTPRQSQDLTPRKSIT

Annotated regions:
phrase: GVVGLSMPRYCLFGETVYVANKM
type: CONSERVED_SITE
name: A/G_cyclase_CS
description: Adenylyl cyclase class-4/guanylyl cyclase, conserved site

phrase: YGLIIDHIATYIKEKYGESTWSEVKFVSGVTDDTFQMDKKFSEGLSHKLIWACHDVTGDPVDELMTNIGTSFYKFLTKFEFNKVLRVLGRTFPQFLNGLDNLHEYLRFTFPKLKPPSFYCEHESRTGLTLHYRSKRRGFLHYVQGQIRNISQELFQTEVVI
type: DOMAIN
name: Heme_NO-bd
description: Heme NO-binding

phrase: TILFTDIVEFTKMCSSLTPLEVIEFLKVIYTNFDKIIDTHGVYKVETIGDAYMVVSGAPTKTEHDAEFILDCASQFLVEAGKMVNMNNKIHKIDIRAGVHSGSVVAGVVGLSMPRYCLFGETVYVANKM
type: DOMAIN
name: A/G_cyclase
description: Adenylyl cyclase class-3/4/guanylyl cyclase

phrase: VTILFTDIVEFTKMCSSLTPLEVIEFLKVIYTNFDKIIDTHGVYKVETIGDAYMVVSGAPTKTEHDAEFILDCASQFLVEAGKMVNMNNKIHKIDIRAGVHSGSVVAGVVGLSMPRYCLFGETVYVANKMEQNSSPMKILVSETTHNKIEESDPGLYQFERREEIEIKDDQTIQTFF
type: DOMAIN
name: A/G_cyclase
description: Adenylyl cyclase class-3/4/guanylyl cyclase

phrase: VKITSDIFFDIFPFIIVFNRGMRIRNIGIGLLRVMAGIVGKKINQTFLLMRPFIRFRWEEIMLHSNNIFELISSDPIQEDEDGILVYKTTDVDQMTEERHRMGDGEREKFLSLKGQMFYMEEWESICFVGIPVMSHLPQMYKSGLFINDFALHDSSRDLVLASTQQSAELKLLLHQEAQKSRNMRENMNRLKKERRRTDKLLYQMLPKSVANQ
type: DOMAIN
name: HNOB_dom_associated
description: Haem NO binding associated

phrase: ERFDSVTILFTDIVEFTKMCSSLTPLEVIEFLKVIYTNFDKIIDTHGVYKVETIGDAYMVVSGAPTKTEHDAEFILDCASQFLVEAGKMVNMNNKIHKIDIRAGVHSGSVVAGVVGLSMPRYCLFGETVYVANKMEQNSSPMKILVSETTHNKIEESDPGLYQFERREEIEIKDDQTIQTFFV
type: DOMAIN
name: A/G_cyclase
description: Adenylyl cyclase class-3/4/guanylyl cyclase

phrase: KERRRTDKLLYQMLPKSVANQLRHGESAVACCERFDSVTILFTDIVEFTKMCSSLTPLEVIEFLKVIYTNFDKIIDTHGVYKVETIGDAYMVVSGAPTKTEHDAEFILDCASQFLVEAGKMVNMNNKIHKIDIRAGVHSGSVVAGVVGLSMPRYCLFGETVYVANKMEQNSSPMKILVSETTHNKIEESDPGLYQFE
type: DOMAIN
name: A/G_cyclase
description: Adenylyl cyclase class-3/4/guanylyl cyclase
Protein sequence:
MDREALLQAVKEARELAKPRNFTQSFEFIATLKEIDMRKPENRIKTEVVLPHGRGKEAKIAVIGTGDLAKQAEELGLTVIRKEEIEELGKNKRKLRKIAKAHDFFIAQADLMPLIGRYMGVILGPRGKMPKPVPANANIKPLVERLKKTVVINTRDKPYFQVLVGNEKMTDEQIVDNIEAVLNVVAKKYEKGLYHIKDAYVKLTMGPAVKVKKEKAKKK

Annotated regions:
phrase: MPLIGRYMGVILGPRGKMP
type: CONSERVED_SITE
name: Ribosomal_uL1_CS
description: Large ribosomal subunit protein uL1, conserved site
Protein sequence:
MSDMPPPPPPPRNQPPRNPFKGMRDNKQPGTDAKPPMPKWAIWAIVAAVMVIAFGSQFISQPTGEKISYTEFLELVRDGDVREITINNSNNVISGELKNGGKFTTTGAMLMSEADEQLLKQQGVNYDFKTPQPNWFTSLLPIFLPFLLIIGFFVWMQRRAMGQAGNIMSVGRSKAKAYQADKPSTTFSDVAGYDGVKMEIKEVVDFLRMPERFKEIGARVPKGILLVGPPGTGKTLFARAVAGEAGVGFLSVTGSDFMEMFVGVGASRVRDLFQQARKMGKAIIFIDEIDSIGRKRGAGLGGGHDEREQTLNQLLAEMDGFEATEGIVILAATNRPDILDAALLRPGRFDRQIIVPLPEFEERLAILKVHSRDKRMGSDVDMDTMAKATPGMSGADLANLVNEAALFAVRRGSTFIERIDFENARDRVVLGASRESLVLSPEEKRATAIHEGGHAVLATVLTHSDPLHKVTILPRGMALGVTWSLPQERHTYSREYFEDLICKAMGGRVAEKIVYGHLNSGAANDLEQATGIARRMVREWGMSDKVGPMAWNSQQQVFLGEDLMTSGREYSDSTARMLDEEISRILNEQEQRAHNLLTQHRAGLEAVAEKLLEEETIDGATVGRLIQESLDTPTSTTV

Annotated regions:
phrase: IVILAATNRPDILDAALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: VPKGILLVGPPGTGKTLFARAVAGEAGVGFLSVTGSDFMEMFVGVGASRVRDLFQQARKMGKAIIFIDEIDSIGRKRGAGLGGGHDEREQTLNQLLAEMDGFEATEGIVILAATNRPDILDAALLRPGRFDRQIIVPLP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: WAIWAIVAAVMVIAFGSQFISQPTGEKISYTEFLELVRDGDVREITINNSNNVISGELKNGGKFTTTGAMLMSEADEQLLKQQGVNYDF
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular

phrase: DVDMDTMAKATPGMSGADLANLVNEAALFAVRRGSTFIERIDF
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: ILLVGPPGTGKTLFARAVAGEAGVGFLSVTGSDFMEMFVGVGASRVRDLFQQARKMGKAIIFIDEIDSIGRKRGAGLGGGHDEREQTLNQLLAEMDGFEATEGIVILAATNRPDILDAALLRPGRFDRQIIVP
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: VLSPEEKRATAIHEGGHAVLATVLTHSDPLHKVTILPRGMALGVTWSLPQERHTYSREYFEDLICKAMGGRVAEKIVYGHLNSGAANDLEQATGIARRMVREWGMSDKVGPMAWNSQQQVFLGEDLMTSGREYSDSTARMLDEEISRILNEQEQRAHNLLTQHRAGLEAVAEKLLEEETIDGAT
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41
Protein sequence:
MSLRLAELLADPTLPPGLAELRVGGLCADSRRVAPGDVFVALAGASSHGLRYAAEVRAAGAVAVLYDPAEALPADPAAVAGALAVPGLRSRLGELADRVHGSPSATLRVVGVTGTNGKTSTVHLLAEALERLGLAAGTVGTLGAGRVGRLVAGERTTPDVASVHALLAQLRDDGAQAVAMEVSSHALAQGRVDGVRFALAVFSNLSRDHLDYHGDMASYAAAKARLFAWPGLPAAVINIDDAFGRERLATLSGPTLWTVSAAGAPEARLRAERLELGAEGLRFELVEAGQRASIASPLLGRFNADNLLAVAGSLRALGFAFDAVAAVLPELQPVRGRMTRLGGGSAPLVLVDYAHTPDALALALASLRGHVRGRLWCVFGCGGERDRGKRAAMAAVAEAGADRVIVTDDNPRGEDGDAIVADILAGFSEPSRHRVLRDRRAAIHAAIGAAVTGDGVLLAGKGHEPYQEITGVKHPFDDLAEARAALEARR

Annotated regions:
phrase: GRMTRLGGGSAPLVLVDYAHTPDALALALASLRGHVRGRLWCVFGCGGERDRGKRAAMAAVAEAGADRVIVTDDNPRGEDGDAIVADILAGFSEPSRHRVLRDRRAAIHAAIGAAVTGDGVLLAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: GLCADSRRVAPGDVFVALAGASSHGLRYAAEVRAAGAVAVLYDPAEALPADPAAVAGALAVPGLRSRLGELAD
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: VTGTNGKTSTVHLLAEALERLGLAAGTVGTLGAGRVGRLVAGERTTPDVASVHALLAQLRDDGAQAVAMEVSSHALAQGRVDGVRFALAVFSNLSRDHLDYHGDMASYAAAKARLFAWPGLPAAVINIDDAFGRERLATLSGPTLWTVSAAGAPEARLRAERLELGAEGLRFELVEAGQRASIASPLLGRFNADNLLAVA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central
Protein sequence:
MVISAIRGGIGFLTRVPIGHDKKAWDAFRQTPVAFTVIGYPLGTIVALPFVLLSIVPVPTLIGVYLLILIGVTGITHIDGIADIGDAAVVHDTDDEHSRRRSVLHDSQVGVGGALAVTVTVVSLALGVLGATRTTPQVTFILVLTAEVGAKSAMALLVCTGDAAHDGLGAALIDESTPLSLFPVILALTPLLLAIPYLGASPTAAVVLTPLIVALVIKQWADNALGGISGDVLGAVNEVSRAAAIHAGVVVWML

Annotated regions:
Protein sequence:
MEDNNLNQYDDGGFNNGNRGGNKNNNNGNRGPGGNGDNPKKQSIFLLLIAALITLLCMSYFMKAMTGGTEKEITYNEFIKMVEDGEVESVVVETDQITIYPKDTEETSTNIYGMPVITYYTGIMEDNDTLTARLIEHNVDVNKKVPDGSGMLLSILLTYVFPILLMWVLLSFIFRRMSKGGGGPMGVGKSNAKVYVQKETGVTFKDVAGEDEAKESLQEVVDFLHNPGKYSKIGAKLPKGALLVGPPGTGKTLLAKAVAGEAHVPFFSLAGSDFIELYVGVGASRVRDLFKEATKNAPCIIFIDEIDAIGRSRDSKYGGGNEEREQTLNQLLSEMDGFDTSKGILILGATNRPEILDKALLRPGRFDRRIIVDKPDLKGRIEILKVHAKDVLMDDSVDLDAIALATSGAVGADLANMINEGAINAVQKGRNYVCQHDLFEAVEQVLVGKEKKDRIMSKEERKIVSYHEVGHALLSALQKNSEPVQKITIVPRTMGALGYVMQVPEEEKFLNTKAELHDMLVGYLGGRAAEEIVFDTVTTGAANDIEKATNIARNMVTRFGMSEKFGLMGLATVESEYLDGGARLTCSDVTAADVDTEVRELLKECYAEAKQLLGQNRDLMDKIAAYLIEKETITGKEFMKIYRAEKGLPEPEEKAEGESETKSSEAEAKKVESESKTSEAEIKVSESGIKAYEAEDGKVIIKKDSMILSPEFEAKPEKAREPEKEVSAYGGPVGRFSNASGEFVKNGDSIKNGNFAEELQNKIDEQK

Annotated regions:
phrase: LLVGPPGTGKTLLAKAVAGEAHVPFFSLAGSDFIELYVGVGASRVRDLFKEATKNAPCIIFIDEIDAIGRSRDSKYGGGNEEREQTLNQLLSEMDGFDTSKGILILGATNRPEILDKALLRPGRFDRRIIV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: LPKGALLVGPPGTGKTLLAKAVAGEAHVPFFSLAGSDFIELYVGVGASRVRDLFKEATKNAPCIIFIDEIDAIGRSRDSKYGGGNEEREQTLNQLLSEMDGFDTSKGILILGATNRPEILDKALLRPGRFDRRIIVDKP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: SVDLDAIALATSGAVGADLANMINEGAINAVQKGRNYVCQHD
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: RIMSKEERKIVSYHEVGHALLSALQKNSEPVQKITIVPRTMGALGYVMQVPEEEKFLNTKAELHDMLVGYLGGRAAEEIVFDTVTTGAANDIEKATNIARNMVTRFGMSEKFGLMGLATVESEYLDGGARLTCSDVTAADVDTEVRELLKECYAEAKQLLGQNRDLMDKIAAYLIEKETITGKEFMK
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: ILILGATNRPEILDKALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: FLLLIAALITLLCMSYFMKAMTGGTEKEITYNEFIKMVEDGEVESVVVETDQITIYPKDTEETSTNIYGMPVITYYTGIMEDNDTLTARLIEHNVDVNKK
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular
Protein sequence:
MLDNPKLTARQQQVLDLIQNTMARTGAPPTRAEIAAELGFKSANAAEEHLQALARKGAIELVSGTSRGIRLHSETLRSIHAARSGPSGAGNPGSSPWVLPLIGRVAAGSPILAQEHVEQTYSVENGLFQHKPDYLLKVRGMSMRDAGIIDGDLLAVQATREARNGQIIVARLGDDVTVKRLRRTASTIELLPENPDYPVIVVQPGEPFEIEGLAVGLIRNTMLM

Annotated regions:
phrase: KLTARQQQVLDLIQNTMARTGAPPTRAEIAAELGFKSANAAEEHLQALARKGAIELVSGTSR
type: DOMAIN
name: LexA_DNA-bd_dom
description: LexA repressor, DNA-binding domain

phrase: YLLKVRGMSMRDAGIIDGDLLAVQATREARNGQIIVARLGDDVTVKRLRRTASTIELLPENPDYPVIVVQPGEPFEIE
type: DOMAIN
name: LexA-like
description: LexA-like

phrase: PLIGRVAAGSPILAQEHVEQTYSVENGLFQHKPDYLLKVRGMSMRDAGIIDGDLLAVQATREARNGQIIVARLGDDVTVKRLRRTASTIELLPENPDYPVIVVQPGEPFEIEGLA
type: DOMAIN
name: Peptidase_S24_S26A/B/C
description: Peptidase S24/S26A/S26B/S26C