nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTMHVEVGPDSTAPPHSSGIKVIIIGLGIGGLAAAIECHRKGHSVIAFDKAQELKPVGDGIALAHNAVRVIEKWGKGTVGQELGRLSSRLNTTVIYDQTGRFIAEDKLDGFKAGEGHLLPRGELSQVMYKHAKSLGIDMRLASEVDEYWEDENSAGVIVDGEKITADCVVACDGVNSKARRHIIGYEPELRSSGSCVFRGWMTTEEPLVGSHWLLSHTDQADQVKVFAGDGVHVLLSTIQHGKMVFWLCTHKDNDCYDRKKEAPPTPEVDGMIHLIRDWPMRGQIESTIRKTLAKNVMHYPLLIREALSNWRSKGGRMVIIGDAAHPFLPVSGQGAAQAIEDAAVLAITLHLAGKEEVPLALHALEKIRLPRTALLQRSSLELERFWLNIDWPEVEKCPELLTIPRPKWIHGHDCQTHAYTEFAKVVSAIQMREEYHPLGGPRDSTNGESLLALLRQDT

Annotated regions:
phrase: KVIIIGLGIGGLAAAIECHRKGHSVIAFDKAQELKPVGDGIALAHNAVRVIEKWGKGTVGQELGRLSSRLNTTVIYDQTGRFIAEDKLDGFKAGEGHLLPRGELSQVMYKHAKSLGIDMRLASEVDEYWEDENSAGVIVDGEKITADCVVACDGVNSKARRHIIGYEPELRSSGSCVFRGWMTTEEPLVGSHWLLSHTDQADQVKVFAGDGVHVLLSTIQHGKMVFWLCTHKDNDCYDRKKEAPPTPEVDGMIHLIRDWPMRGQIESTIRKTLAKNVMHYPLLIREALSNWRSKGGRMVIIGDAAHPFLPVSGQGAAQAIEDAAVLAITLHLAGKE
type: DOMAIN
name: FAD-bd
description: FAD-binding domain
Protein sequence:
MQVQPPDFMIFTGNANPVLAAEIAQHLNTQLGAANVGRFSDGEVTVEITQNVRARDVFVIQSTCAPTNENLMELIIMVDALKRASAARISAVIPYFGYARQDRRPRSSRVPISAKVVANMLQTVGVNRVLTMDLHADQIQGFFDIPVDNIYASPVLLGDLRQKNYEDLLVVSPDVGGVVRARALAKQLGCDMAIIDKRRPKANVSEVMHVIGDIEGRNCVIMDDMIDTAGTLVKAAEVLKERGAKHVYAYCTHAIFSGPAIDRIAKGSALDEVVVTNTIPLSQAAQACAKIRQLSVAPLMAETIARIASGESVMSLFADQDNLF

Annotated regions:
phrase: MIFTGNANPVLAAEIAQHLNTQLGAANVGRFSDGEVTVEITQNVRARDVFVIQSTCAPTNENLMELIIMVDALKRASAARISAVIPYFGYARQDRRPRSSRVPISAKVVANMLQTV
type: DOMAIN
name: Pribosyltran_N
description: Ribose-phosphate pyrophosphokinase, N-terminal domain

phrase: DLHADQIQGFFDIPV
type: CONSERVED_SITE
name: PRib_PP_synth_CS
description: Phosphoribosyl pyrophosphate synthetase, conserved site

phrase: ASPVLLGDLRQKNYEDLLVVSPDVGGVVRARALAKQLGCDMAIIDKRRPKANVSEVMHVIGDIEGRNCVIMDDMIDTAGTLVKAAEVLKERGAKHVYAYCTHAIFSGPAIDRIAKGSALDEVVVTN
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain
Protein sequence:
MERKTVLVIADLGGCPPHMFYKSAAEKYNLVSFIPRPFAITASHAALIEKYSVAVIKDKDYFKSLADFEHPDSIYWAHEDHNKPEEEVVEQIVKVAEMFGADAITTNNELFIAPMAKACERLGLRGAGVQAAENARDKNKMRDAFNKAGVKSIKNKRVTTLEDFRAALEEIGTPLILKPTYLASSIGVTLITDTETAEDEFNRVNDYLKSINVPKAVTFEAPFIAEEFLQGEYGDWYQTEGYSDYISIEGIMADGEYFPIAIHDKTPQIGFTETSHITPSILDEEAKKKIVEAAKKANEGLGLQNCATHTEIKLMKNREPGLIESAARFAGWNMIPNIKKVFGLDMAQLLLDVLCFGKDADLPDGLLDQEPYYVADCHLYPQHFKQNGQIPETAEDLVIEAIDIPDGLLKGDTEIVSFSAAAPGTSVDLTLFEAFNSIAAFELKGSNSQDVAESIRQIQQHAKLTAKYVLPV

Annotated regions:
phrase: RDAFNKAGVKSIKNKRVTTLEDFRAALEEIGTPLILKPTYLASSIGVTLITDTETAEDEFNRVNDYLKSINVPKAVTFEAPFIAEEFLQGEYGDWYQTEGYSDYISIEGIMADGEYFPIAIHDKTPQIGFTETSHITPSILDEEAKKKIVEAAKKANEGLGLQNCATHTEIKLMKNREPGLIESAARFAGWNMIPNIKKVFGLDMAQLLLDVL
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold
Protein sequence:
MSDAQFDAALDLLRRLNPTTLQENLNNLIELQPNLAQDLLSSVDVPLSTQKDSADSNREYLCCDYNRDIDSFRSPWSNTYYPELSPKDLQDSPFPSAPLRKLEILANDSFDVYRDLYYEGGISSVYLWDLNEEDFNGHDFAGVVLFKKNQSDHSNWDSIHVFEVTTSPSSPDSFNYRVTTTIILHLDKTKTDQNSHMMLSGNLTRQTEKDIAIDMSRPLDVIFTSHVANLGSLIEDIESQMRNLLETVYFEKTRDIFHQTKNAAIASSAEEANKDAQAEVIRGLQSL

Annotated regions:
phrase: CDYNR
type: CONSERVED_SITE
name: F-actin_capping_bsu_CS
description: F-actin capping protein, beta subunit, conserved site
Protein sequence:
MDSQNIRIRLKAYDHRVLDNSTREIVNTAKRTGAQVRGPIPLPTHIERFTVNRSPHVDKKSREQFEIRTHRRLLDIVEPTPQTVDALMKLDLAAGVDVEIKI

Annotated regions:
phrase: RIRLKAYDHRVLDNSTREIVNTAKRTGAQVRGPIPLPTHIERFTVNRSPHVDKKSREQFEIRTHRRLLDIVEPTPQTVDALMKLDLAAGVDVEI
type: DOMAIN
name: Ribosomal_uS10_dom
description: Small ribosomal subunit protein uS10 domain

phrase: AKRTGAQVRGPIPLP
type: CONSERVED_SITE
name: Ribosomal_uS10_CS
description: Small ribosomal subunit protein uS10, conserved site

phrase: RIRLKAYDHRVLDNSTREIVNTAKRTGAQVRGPIPLPTHIERFTVNRSPHVDKKSREQFEIRTHRRLLDIVEPTPQTVDALMKLDLAAGVDVEI
type: DOMAIN
name: Ribosomal_uS10_dom
description: Small ribosomal subunit protein uS10 domain
Protein sequence:
MTRKRVVLGVSGGIAAYKACSLLRLFTESGHDVTVVPTAAALNFVGAATWAALSGKPVATDVWTDVHQVPHVRLGQHADLVVVAPSTADLMAKAAHGLADDLLTNTLLTASCPVVLAPAMHTEMWEHPATVANVATLRSRGVHVIDPVSGRLTGADTGLGRLPEPQDIFDVCRELLSRSDGTVAATGGLAGRRVVISAGGTREPLDPVRFLGNRSSGKQGYALAEVALSRGADVTLISANVALPVPEGVTLVPVQTAIELGEAVAKAAQDCDVVVMAAAVADYRPAHYTDVKIKKTYDETVPESRPLAPTIELVRNPDVLAGLVQSRGSSTVPVIVGFAAETGDPEHSVLDLARAKFARKGCDVLVANEVGVDKTFGQDTNTVFILRRGVDAVTYAGPAPKDVVSATVWDVIQDVLSSG

Annotated regions:
phrase: LAGRRVVISAGGTREPLDPVRFLGNRSSGKQGYALAEVALSRGADVTLISANVALPVPEGVTLVPVQTAIELGEAVAKAAQDCDVVVMAAAVADYRPAHYTDVKIKKTYDETVPESRPLAPTIELVRNPDVLAGLVQSRGSSTVPVIVGFAAETGDPEHSVLDLARAKFARKGCDVLVANEVGVDKTFGQDTNTVFI
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal

phrase: KRVVLGVSGGIAAYKACSLLRLFTESGHDVTVVPTAAALNFVGAATWAALSGKPVATDVWTDVHQVPHVRLGQHADLVVVAPSTADLMAKAAHGLADDLLTNTLLTASCPVVLAPAMHTEMWEHPATVANVATLRSRGVHVIDPVSGRLTGADTGLGRLPEPQDIFDVCR
type: DOMAIN
name: Flavoprotein
description: Flavoprotein
Protein sequence:
MSTEAPLNISEIFYSIQGESSFAGWPCAFVRLAGCGHGCRYCDTTYAEEPGTAMTIDEIMHRVLAFDAPCVEVTGGEPLLQSGTFGLLSALCDRHPVVLLETGGFLPVDRVDPRVHAIIDIKAPSSGVMEHNCAANFTLALNEPERFEFKIVVASEADYLWAKSYIAGHGILGKCSIIFGPVFGQLEPRLLAEWMLRDRLPVRMQLQLHKYIWNPDARGV

Annotated regions:
phrase: AGCGHGCRYCDTTYAEEPGTAMTIDEIMHRVLAFDAPCVEVTGGEPLLQSGTFGLLSALCDRHPVVLLETGGFLPVDR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: FAGWPCAFVRLAGCGHGCRYCDTTYAEEPGTAMTIDEIMHRVLAFDAPCVEVTGGEPLLQSGTFGLLSALCDRHPVVLLETGGFLPVDRVDPRVHAIIDIKAPSSGVMEHNCAANFTLALNEPERFEFKIVVASEADYLWAKSYIAGHGILGKCSIIFGPVFGQLEPRLLAEWMLRDRLPVRMQLQLHKYIWN
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VRLAGCGHGCRYCDTTYAEEPGTAMTIDEIMHRVLAFDAPCVEVTGGEPLLQSGTFGLLSALCDRHPVVLLETGGFLPVDRVDPRVHAIIDIKA
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MSITVNQIVLHQIIKPASANIPANNNNETENGETATQNTQLETVLRQELLPITAEAEQFMLELHQAYQNKTKGYGVFQEQSRFAQSLNRLLERETDFLPFSYEAAKLLSSELAKYAFAESGTFVLCRYNFLATDYLFIALLDSKASVLVDEKLEIHRTQYLNINQFDIAARINLTDLRVNANSNRYLTFIKGRVGRKIGDFFMDFLGADEGLNPQVQNQCLLQAVSDYCQKGELSAEQSQAVKKQVFDYCKGQINAGDEIELTELSETIPTLNQQPFADFAAEQDYGLENNIPPVRSALKSLTKFSGSGKGVTISFDAELLDKRIYWDDMQDTLTIHGLPANLKDQLQRLLKNHN

Annotated regions:
Protein sequence:
MTPHINAPEGAFADVVLMPGDPLRAKYIAETFLENAKEVTNVRNMLGYTGTYKGRPVSVMGHGMGIPSCSIYTKELITEYGVKKIIRVGSCGAVRNDVKVRDVIIGLGACTDSKVNRIRFKDNDFAAIADFDMTQAAVQAAKAKGINYRVGNLFSADLFYTPDVEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALSICTVSDHIRTGEQTSSEERQLTFNDMIEIALESVLLGDQA

Annotated regions:
phrase: VVLMPGDPLRAKYIAETFLENAKEVTNVRNMLGYTGTYKGRPVSVMGHGMGIPSCSIYTKELITEYGVKKIIRVGSCGAVRNDVKVRDVIIGLGACTDSKVNRIRFKDNDFAAIADFDMTQAAVQAAKAKGINYRVGNLFSADLFYTPDVEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALSICTVSDHIRTGEQTSSEERQLTFN
type: DOMAIN
name: Nucleoside_phosphorylase_d
description: Nucleoside phosphorylase domain

phrase: GHGMGIPSCSIYTKE
type: CONSERVED_SITE
name: Nucleoside_phosphorylase_CS
description: Nucleoside phosphorylase, conserved site
Protein sequence:
MSQFTHINASGEANMVDVSAKAETVREARAEAFVHMAPETLQLIVSGQHHKGDVFATARIAGIQAAKKTWDLIPLCHPLLLSKVEVQLEAIEAENKVRIESVCKLAGKTGVEMEALTAASVAALTIYDMCKAVQKDMVIGPVRLLEKTGGKSGHFKVEA

Annotated regions:
phrase: MVDVSAKAETVREARAEAFVHMAPETLQLIVSGQHHKGDVFATARIAGIQAAKKTWDLIPLCHPLLLSKVEVQLEAIEAENKVRIESVCKLAGKTGVEMEALTAASVAALTIYDMCKAVQKDMVIGPVRLLEKTG
type: DOMAIN
name: Mopterin_CF_biosynth-C_dom
description: Molybdopterin cofactor biosynthesis C (MoaC) domain
Protein sequence:
MNKVVLLCRPGFEKECAAEITDKAGQREIFGFARVKENSGYVIYECYQPDDGDKLIRELPFSSLIFARQWFVVGELLQHLPPEDRITPIVGMLQGVVEKGGELRVEVADTNESKELLKFCRKFTVPLRAALRDAGVLANYETPKRPVVHVFFIAPGCCYTGYSYSNNNSPFYMGIPRLKFPAEAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVCDMVEKPAKVAALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINAQIQARQLYHDREEVTVHVRRIWAAVGGRRDER

Annotated regions:
phrase: SRSTLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKRNMWVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVCDM
type: DOMAIN
name: RNA_MeTrfase_FtsJ_dom
description: Ribosomal RNA methyltransferase, FtsJ domain

phrase: MNKVVLLCRPGFEKECAAEITDKAGQREIFGFARVKENSGYVIYECYQPDDGDKLIRELPFSSLIFARQW
type: DOMAIN
name: RlmM_FDX
description: RlmM ferredoxin-like domain

phrase: DRITPIVGMLQGVVEKGGELRVEVADTNESKELLKFCRKFTVPLRAALRDAGVLANYETPKRPVVHVFFIAPGCCYTGYS
type: DOMAIN
name: RlmM_THUMP-like
description: Ribosomal RNA large subunit methyltransferase M, THUMP-like domain
Protein sequence:
MPERELWPAGPGLEPATRVGSCDSMMSTTSTRSGSSDSSYDFLSAEEKECLLFLEETIGSLDTEADSGLSTEKSEQATTPQVPRALPKTQPAPQGHPEEITGRVPEPKRVTPFSSAHPPGPQSLGLRSGSYSLPRNIHIGRNQNLRKSTTLTNSHNPGGSEGLVSGPETEQVSQSREPRQTLATPPDAALELDGALIPPPEAFRDTQPQQRGQGSLPRGPGELSPRPQVHPSLSSQRNREPAPEAMSQKASEKGSTGEPVPPRPPPLVSSRDAGSGDAAVLSGGHPSARPAPLTAPKPRKLPPNIVLKSSRSSFHSDPQNRLSRHSEAAPGDPSPASSSLQEQRKARREALEKLGLPQDQEEPSPRLSRPSVRLKETGVQAVSPAPAQVPGRAPAAAPTQGPSPGKAPALAQPPSPGKVLVPAQESTPGTAPAAKSTPIPIPKGPRAHSPLTQRKPDSGLTLQESGVPGLRQMSFKSNTLERSGIGLSSYLSAEKASSPQTSTSLEKGSFLDRISPSVLRNSRPRPASLGTGKDFEGIQVGKLADLEQEGGPKRLSFQGQSRDKLPRPPCVSVRISPKGVSDEHRREALKKLGLLKE

Annotated regions:
Protein sequence:
MEKKDMLYEGKAKKIFRTDDKDTVVVYYKDDATAFNGEKKGTIEDKGVMNNSITAMLFELLEKKGVKTHFIEKINEREQLCKKVEIVPLEVIVRNIAAGSMAKILGLSEGRKLDTTVFEISYKNDDLNDPLINDYHAVAIGLTNFEELKEMYSIAEKVNNTLKEFFDEQGINLVDFKIEIGRFNGELLLADEISPDTCRLWDKKTGEKLDKDRFRRDMGNVKEAYMEILKRVNK

Annotated regions:
phrase: IVPLEVIVRNIAAG
type: CONSERVED_SITE
name: SAICAR_synthetase_CS
description: SAICAR synthetase, conserved site

phrase: KDMLYEGKAKKIFRTDDKDTVVVYYKDDATAFNGEKKGTIEDKGVMNNSITAMLFELLEKKGVKTHFIEKINEREQLCKKVEIVPLEVIVRNIAAGSMAKILGLSEGRKLDTTVFEISYKNDDLNDPLINDYHAVAIGLTNFEELKEMYSIAEKVNNTLKEFFDEQGINLVDFKIEIGRFNGELLLADEISPDTCRLWDKKTGEKLDKDRFRRDMGNVKEAYMEILKRVN
type: DOMAIN
name: SAICAR_synt/ADE2_N
description: SAICAR synthetase/ADE2, N-terminal

phrase: LVDFKIEI
type: CONSERVED_SITE
name: SAICAR_synthetase_CS
description: SAICAR synthetase, conserved site

phrase: LYEGKAKKIFRTDDKDTVVVYYKDDATAFNGEKKGTIEDKGVMNNSITAMLFELLEKKGVKTHFIEKINEREQLCKKVEIVPLEVIVRNIAAGSMAKILGLSEGRKLDTTVFEISYKNDDLNDPLINDYHAVAIGLTNFEELKEMYSIAEKVNNTLKEFFDEQGINLVDFKIEIGRFNGELLLADEISPDTCRLWDKKTGEKLDKDRFRRDMGNVKEAYMEILK
type: DOMAIN
name: SAICAR_synt/ADE2_N
description: SAICAR synthetase/ADE2, N-terminal
Protein sequence:
MAINPLILLTIFPLFLLLSFTDAGIPRVFSGGSWQTAHATFYGGNDASGTMGGACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSGGIRFTINGHRYFNLVLITNVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSNWQFGQTFVGKNFRV

Annotated regions:
phrase: GGACGYGNLYSQGYGTNTAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPISYRRVACRKSG
type: DOMAIN
name: Expansin/allergen_DPBB_dom
description: Expansin/pollen allergen, DPBB domain

phrase: TAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPIS
type: DOMAIN
name: RlpA-like_DPBB
description: RlpA-like protein, double-psi beta-barrel domain

phrase: YFNLVLITNVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIAPSNWQFGQTFV
type: DOMAIN
name: Expansin_CBD
description: Expansin, cellulose-binding-like domain

phrase: IRFTINGHRYFNLVLITNVAGAGDIARTSVKGSKTGWMSLTRNWGQNWQSNAVLVGQSLSFRVTSSDRRTSTSWNIA
type: DOMAIN
name: Expansin_CBD
description: Expansin, cellulose-binding-like domain

phrase: TAALSTSLFNSGQSCGACFEIKCVNDPKWCHPGNPSVFVTATNFCPPNLAQPSDNGGWCNPPRSHFDLAMPVFLKIAEYRAGIVPIS
type: DOMAIN
name: Expansin/allergen_DPBB_dom
description: Expansin/pollen allergen, DPBB domain
Protein sequence:
MTPVAGPAVHAVPLRARWLGTVAYREALALQQALFAHGGEQHLLLLEHPHVFTYGPRTDLSANLRCEPADVGAELVAVKRGGDVTYHGPGQLVGYPIVSVANSLGASDHVRAVQQVVVHTLHELGLTSAGCLPDYPGVWIDPDGPNPRKICAIGVRLSRGRTMHGFALNVTTDLTYMREHIVPCGIADKPVTSLAEELAGTGREVSMREVVDVLVRHAAEVWGAGAVERQDVAWRHRPDDLSAFSRGEGPGAAVRTAADHGVAAEPVRLMQRLGQAGVTDGLAIASRKPDWLRPKVVHGPEVLALKKTVREFGLVTVCEEAGCPNLSDCWSDGTATFMVLGERCTRACGFCLVDTRKPLEPETDEPARVAGAVARTGLDHVVLTMVARDDLADGGMAHVAACIAAIREARPQARVETLVSDAKGDAASLEVLFAARPDVMNHNIETVARLQRAVRPSAGYARSLGVLARAKHAGLTTKSGLVVGMGETPDEIEGCLADLASIGVDIVTIGQYLRPTSHHLPVARWVHPDEFVAWKATGEAFGIGHVEASPLTRSSYHARQAADQVTPVAVR

Annotated regions:
phrase: RGGDVTYHGPGQLVG
type: CONSERVED_SITE
name: Octanoyltransferase_CS
description: Octanoyltransferase, conserved site

phrase: HGGEQHLLLLEHPHVFTYGPRTDLSANLRCEPADVGAELVAVKRGGDVTYHGPGQLVGYPIVSVANSLGASDHVRAVQQVVVHTLHELGLTSAGCLPDYPGVWIDPDGPNPRKICAIGVRLSRGRTMHGFALNVTTDLTYMREHIVPCGIADKPVTSLAEELAGTGREVSMREVVDVLVRHAAEVWGAG
type: DOMAIN
name: BPL_LPL_catalytic
description: Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain

phrase: WSDGTATFMVLGERCTRACGFCLVDTRKPLEPETDEPARVAGAVARTGLDHVVLTMVARDDLADGGMAHVAACIAAIREARPQARVETLVSDAKGDAASLEVLFAARPDVMNHNIETVARLQRAVRPSAGYARSLGVLARAKHAGLTTKSGLVVGMGETPDEIEGCLADLASIGVDIVTIGQYLRPTSHHLPVARWVHPDEFVAWKATGEAFGI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TATFMVLGERCTRACGFCLVDTRKPLEPETDEPARVAGAVARTGLDHVVLTMVARDDLADGGMAHVAACIAAIREARPQARVETLVSDAKGDAASLEVLFAARPDVMNHNIETVARLQRAVRPSAGYARSLGVLARAKHAGLTTKSGLVVGMGETPDEIEGCLADLASIGVDIVTIGQYLRPTSHHLPVARWVHPDEFVAWKA
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: YREALALQQALFAHGGEQHLLLLEHPHVFTYGPRTDLSANLRCEPADVGAELVAVKRGGDVTYHGPGQLVGYPIVSVANSLGASDHVRAVQQVVVHTLHELGLTSAGCLPDYPGVWIDPDGPNPRKICAIGVRLSRGRTMHGFALNVTTDLTYMREHIVPCGIADKPVTSLAEELAGTGREVSMREVVDVLVR
type: DOMAIN
name: BPL_LPL_catalytic
description: Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain

phrase: VLGERCTRACGFCLVDTRKPLEPETDEPARVAGAVARTGLDHVVLTMVARDDLADGGMAHVAACIAAIREARPQARVETLVSDAKGDAASLEVLFAARPDVMNHNIETVARLQRAVRPSAGYARSLGVLARAKHAGLTTKSGLVVGMGETPDEIEGC
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MPSARFGRRGIVLLTLGLVGPCGVGGAAAGSSTGIMALRFLLGFLLAGVDLGVYLMRLELCDPTQRLRVALAGELVGVGGHFLFLGLALVSKDWRFLQRMITAPCILFLFYGWPGLFLESARWLIVKRQIEEAQSVLRILAERNRPHGQMLGEEAQEALQELENTCPLPATSTFSFASLLNYRNIWKNLLILGFTNFIAHAIRHCYQPVGGGGSPSDFYLCSLLASGTAALACVFLGVTVDRFGRRGILLLSMTLTGIASLVLLGLWDYLNDAAITTFSVLGLFSSQASAILSTLLASEVIPTTVRGRGLGLIMALGALGGLSCPAQRLHMGHGAFLQHVVLAACALLCILSIMLLPETKRKLLPEVLRDGELCRRPSLLRQPPPNRCDHVPLLATPNPAL

Annotated regions:
phrase: LGVTVDRFGRRGILLL
type: CONSERVED_SITE
name: Sugar_transporter_CS
description: Sugar transporter, conserved site

phrase: MPSARFGRRGIVLLTLGLVGPCGVGGAAAGSSTGIMALRFLLGFLLAGVDLGVYLMRLELCDPTQRLRVALAGELVGVGGHFLFLGLALVSKDWRFLQRMITAPCILFLFYGWPGLFLESARWLIVKRQIEEAQSVLRILAERNRPHGQMLGEEAQEALQELENTCPLPATSTFSFASLLNYRNIWKNLLILGFTNFIAHAIRHCYQPVGGGGSPSDFYLCSLLASGTAALACVFLGVTVDRFGRRGILLLSMTLTGIASLVLLGLWDYLNDAAITTFSVLGLFSSQASAILSTLLASEVIPTTVRGRGLGLIMALGALGGLSCPAQRLHMGHGAFLQHVVLAACALLCILSIMLLPETK
type: DOMAIN
name: MFS_dom
description: Major facilitator superfamily domain
Protein sequence:
MTAPANVRVRFCPSPTGTPHVGMVRTALFNWAYARHTGGTFVFRIEDTDAARDSEESYLALLDALRWLGLDWDEGPEVGGPYGPYRQSQRGEIYRDVVAKLVEAGEAYYAFSTPEEVEARHIAAGRNPKLGYDNFDRHLTDSQRAAFLAEGRQPVVRLRMPDEDLGWDDLVRGSTVFAAGSVPDFALTRANGDPLYTLVNPCDDALMKITHVLRGEDLLPSTPRQLALYQALIRIGVAERIPQFAHLPTVLGEGTKKLSKRDPQSNLFAHRDRGFIPEGLLNYLALLGWAIADDRDVFSLDEMVAAFDVVDVNSNPARFDQKKADALNAEHIRMLTAADFAARLRHYLDVHGHRLALDDAAFATAAELVQTRIVVLGDAWDLLKFLNDDEYAIDPKAAAKELGPDGAAVLDAALPALDAVTDWAAPQIEAALKTALIDGLGLKPRKAFGPIRVGATGTTISPPLFESLQLLGRDRSLRRLRAARERAGQHSA

Annotated regions:
phrase: NVRVRFCPSPTGTPHVGMVRTALFNWAYARHTGGTFVFRIEDTDAARDSEESYLALLDALRWLGLDWDEGPEVGGPYGPYRQSQRGEIYRDVVAKLVEAGEAYYAFSTPEEVEARHIAAGRNPKLGYDNFDRHLTDSQRAAFLAEGRQPVVRLRMPDEDLGWDDLVRGSTVFAAGSVPDFALTRANGDPLYTLVNPCDDALMKITHVLRGEDLLPSTPRQLALYQALIRIGVAERIPQFAHLPTVLGEGTKKLSKRDPQSNLFAHRDRGFIPEGLLNYLALLGWAIADDRDVFSLDEMVAAFDVVDVNSNPARFDQK
type: DOMAIN
name: Glu/Gln-tRNA-synth_Ib_cat-dom
description: Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain

phrase: FAARLRHYLDVHGHRLALDDAAFATAAELVQTRIVVLGDAWDLLKFLNDDEYAIDPKAAAKELGPDGAAVLDAALPALDAVTDWAAPQIEAALKTALIDGLGLKPRKAFGPIRVGATGTTISPPLFESLQLLGRDRSLRRLRA
type: DOMAIN
name: aa-tRNA-synth_I_cd-bd
description: Aminoacyl-tRNA synthetase, class I, anticodon-binding

phrase: NVRVRFCPSPTGTPHVGMVRTALFNWAYARHTGGTFVFRIEDTDAARDSEESYLALLDALRWLGLDWDEGPEVGGPYGPYRQSQRGEIYRDVVAKLVEAGEAYYAFSTPEEVEARHIAAGRNPKLGYDNFDRHLTDSQRAAFLAEGRQPVVRLRMPDEDLGWDDLVRGSTVFAAGSVPDFALTRANGDPLYTLVNPCDDALMKITHVLRGEDLLPSTPRQLALYQALIRIGVAERIPQFAHLPTVLGEGTKKLSKRDPQSNLFAHRDRGFIPEGLLNYLALLGWAIADDRDVFSLDEMVAAFDVVDVNSNPARFDQKKADALNAEHIR
type: DOMAIN
name: GluRS_core
description: Glutamyl-tRNA synthetase
Protein sequence:
MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIALHDRPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMPGRMALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICLFEAVRQRT

Annotated regions:
phrase: MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQ
type: DOMAIN
name: SpoU_subst-bd
description: RNA 2-O ribose methyltransferase, substrate binding

phrase: MIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALESQGVVIQLANRQYLDEKSDGAVHQGIIARVKPG
type: DOMAIN
name: SpoU_subst-bd
description: RNA 2-O ribose methyltransferase, substrate binding

phrase: FLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLARTMRMLQEENIWIVGTAGEADHTLYQSKMPGRMALVMGAEGEGMRRLTREHCDELISIPMAGSVSSLNVSVATGICL
type: DOMAIN
name: SpoU_MeTrfase
description: tRNA/rRNA methyltransferase, SpoU type
Protein sequence:
MELKLLNENGQEGAVVNASDVVFGRDYNEALIHQVVVAYQANARQGNRAQKDREQVKHTTKKPWRQKGTGRARAGMSSSPLWRGGGRIFPNSPEENFSHKVNKKMHRAGLCSIFSQLAREGRLSVVEDIILEAPKTKLLAEKFKTMGLDSVLIITDTVDENLYLASRNLPHVAIVEPRYADPLSLIYFKKVLVTKAAVAQIEELLS

Annotated regions:
Protein sequence:
MSKEEVLEFSGVVIELLPNAMFRVKLENDHEIIAHTAGRMRKNRIRVLAGDKIMVEMTPYDLTKGRITYRYK

Annotated regions:
phrase: MSKEEVLEFSGVVIELLPNAMFRVKLENDHEIIAHTAGRMRKNRIRVLAGDKIMVEMTPYDLTKGRITYRY
type: DOMAIN
name: RNA-binding_domain_S1_IF1
description: RNA-binding domain, S1, IF1 type

phrase: EFSGVVIELLPNAMFRVKLENDHEIIAHTAGRMRKNRIRVLAGDKIMVEMTPYDLTKGRITY
type: DOMAIN
name: RNA-binding_domain_S1_IF1
description: RNA-binding domain, S1, IF1 type
Protein sequence:
MADTLESSLEDPLRSFVRVLEKRDGTVLRLQQYSSGGVGCVVWDAAIVLSKYLETPEFSGDGAHALSRRSVLELGSGTGAVGLMAATLGADVVVTDLEELQDLLKMNINMNKHLVTGSVQAKVLKWGEEIEGFPSPPDFILMADCIYYEESLEPLLKTLKDISGFETCIICCYEQRTMGKNPEIEKKYFELLQLDFDFEKIPLEKHDEEYRSEDIHIIYIRKKKSKFPS

Annotated regions:
Protein sequence:
MYFAEPVAKLIEHLAKLPGIGPKTAQKLALYLLEIPEEEARALAEAIITARKNTRYCSICFNLTDTDPCAICRNPGRNHRLLMVVEEAKDVAAMERTGSFNGIYHVLHGVLSPIKGIGPEDLKVRELLLRLSREPVEEIIIATNPTVEGEATAMYLASLLKPLNFKVTRIAHGLPVGSDIEYADELTIRKALEGRRVLE

Annotated regions:
phrase: RLLMVVEEAKDVAAMERTGSFNGIYHVLHGVLSPIKGIGPEDLKVRELLLRLSREPVEEIIIATNPTVEGEATAMYLASLLKPLNFKVTRIAHGL
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: RYCSICFNLTDTDPCAICR
type: DOMAIN
name: Rcmb_RecR_Znf
description: Recombination protein RecR, zinc finger domain

phrase: RLLMVVEEAKDVAAMERTGSFNGIYHVLHGVLSPIKGIGPEDLKVRELLLRLSREPVEEIIIATNPTVEGEATAMYLASLLKPLNFKVTRIAHGLPVGSDIEYADELTIRK
type: DOMAIN
name: TOPRIM_RecR
description: RecR, TOPRIM domain

phrase: LLMVVEEAKDVAAMERTGSFNGIYHVLHGVLSPIKGIGPEDLKVRELLLRLSREPVEEIIIATNPTVEGEATAMYLASLLKPLNFKVTRI
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: EHLAKLPGIGPKTAQKLAL
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: RLLMVVEEAKDVAAMERTGSFNGIYHVLHGVLSPIKGIGPEDLKVRELLLRLSREPVEEIIIATNPTVEGEATAMYLASLLKPLN
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: CSICFNLTDTDPCAICRNPGR
type: DOMAIN
name: Rcmb_RecR_Znf
description: Recombination protein RecR, zinc finger domain
Protein sequence:
MVEVTIWLAFFAGVVSFLSPCVFPLVPVYLAQLTGTQISGNEITADRKLILMRSLGFILGFTSIFIFLGASSTFIGQLFWGNRQLFEQIGGIIITVFGLQMMGVISIRMLLSEKRLQAKPRQSASFANSVLIGFLFATGWTPCIGLVLGAILVLAGDANTMWSGMSMLFVYSMGLAIPFFLVALLWSRSLHKVRKLNKWLPTIQKGSGVVMVALGVLLFTGQFSTIAAYLARINPFGI

Annotated regions:
phrase: IWLAFFAGVVSFLSPCVFPLVPVYLAQLTGTQISGNEITADRKLILMRSLGFILGFTSIFIFLGASSTFIGQLFWGNRQLFEQIGGIIITVFGLQMMGVISIRMLLSEKRLQAKPRQSASFANSVLIGFLFATGWTPCIGLVLGAILVLAGDANTMWSGMSMLFVYSMGLAIPFFLVALLWSRSLHKVRKLNKWLPTIQKGSGVVMVALGVLL
type: DOMAIN
name: Cyt_c_assmbl_TM_dom
description: Cytochrome C biogenesis protein, transmembrane domain
Protein sequence:
MEPWVPQWPPPSRGRPRSPVPDSERGLQRDGYHRPAPHSWHNGERLPQWQDVQGSPQPQQDPRAGPQRPQHVPRLGAWQQHAPAVDYYEGGHRGQLYSRPSYESLYPALTEDYAYGSHYYHGHPQWQQEGRVPRQGSPYVWHDSYRDQRHLSEHRPENQSRTFRRDSETQFQRSNRRNPHKDGPASSSGQERPGELFAEGRLSWGLTSQPSLGSKSNLLQQREVGLSSSSYELSQYMVDAPELYDPAAAAGWRPVPAEDIPVAGPKAPKKFYIPHVSVGFGPRGQLVCVSPSSPMDGQTALVEVHSMEVILNDLEEQEEMRSFPGPLIREDVHKVDVMTFCQQKAAQSRKSGTPGGRDSALLWQLLVLLCRQNGSMAGSDIAELLLQDCKKLEKYKKQPPVANLINLADEDWPVLSSGPRNLLTGETPPSVETPAQVVGKFTQLLYYGRKKEALEWAMKNHLWGHALFLSSKMEPRTYKWVMSGFTSTLALNDPLQTLFQLLSGRIPQAATCCGDTQWGDWRPHLAVILSNQAGDPELRRRVIVSMGDTLASKGLVEAAHFCYLMAQVPFGHYTVNADRLALLGSSHSQEFPRFASAEAIQRTEVLEYCRTLGGRPGLIASFQVYKLLYASRLADYGLASQAFHYCEAIGTAVLSQAESSHPVLLVELIKLAERLKLADPLVLERRGGDEAWEPDWLQRLRRHQELQQKAAADAGEPHSANLDTPGATGTTESTFYQDLPAYQRFSDAPGCEPAPWPTPTQTGCPSPF

Annotated regions:
phrase: QLLYYGRKKEALEWAMKNHLWGHALFLSSKMEPRTYKWVMSGFTSTLALNDPLQTLFQLLSGRIPQAATCCGDTQWGDWRPHLAVILSNQAGDPELRRRVIVSMGDTLASKGLVEAAHFCYLMAQVPFGHYTVNADRLALLGSSHSQEFPRFASAEAIQRTEVLEYCRTLGGRPGLIASFQVYKLLYASRLADYGLASQAFHYCEAIGTAVLSQAESSHPVLLVELIKLAERL
type: DOMAIN
name: Sec16_Sec23-bd
description: Sec16, Sec23-binding domain

phrase: FGPRGQLVCVSPSSPMDGQTALVEVHSMEVILNDLEEQEEMRSFPGPLIREDVHKVDVMTFCQQKAAQSRKSGTPGGRDSALLWQLLVLLCRQN
type: DOMAIN
name: Sec16_CCD
description: Sec16, central conserved domain
Protein sequence:
MAKHKHEEHPEDVEVKETVETAEQAESASPEKSELELANERADDFENKYLRAHAEMQNIQRRANEERQLLQRYRSQDLAKAILPSLDNLERALAVEGLTDDVKKGLEMVQESLVHALKEEGIEEIPADGEFDHNYHMAIQTVPADDEHPADTIAQVFQKGYKLHDRILRPAMVVVYN

Annotated regions:
Protein sequence:
MKIKDTLNMGKTSFPMRAGLPKNEPIWQKKWDEDHVYEQRQKLNEGKPTFMLHDGPPFANGNIHMGHALNKISKDIIVRYKSMNGFRAPYVPGWDTHGLPIEQQLAKQGVKRKEMSMTDYRELCRQFAMQEIDKQRTDFKRLGVMGDWEHPYITLQHHYEASEIRVFGAMAKKGYIYHGLKPVYWSWSSESTLAEAEIEYHDDKSPSIYVAFKVVDGKGLLDTDTYLVIWTTTPWTIPANYGITVNPRFDYVQVQVGDKKYVVAAELLDRVAEEIGWENPKILKTFKGTDMDKMTAQHPLYDRTSLVMNADHVTLDAGTGLVHTAPGHGEDDYKVGVKYGLPVVSVVDAKGYMNEYAPGFEGVFYDDANKQITQALADKGALLKLDFFTHSYPHDWRTKKPVIFRATTQWFASIDAFRDQILKAIDTVDFKPSWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGEPIIEEETINHVADLFGKYGSNVWFEREAKDLLPEGYTNPHSPNGQFTKEKDIMDVWFDSGSSHQAVLAARPELSFPADLYLEGSDQYRGWFNSSLITSVAATGVAPYRGILSQGFTLDGKGRKMSKSLGNTIVPATIEKQFGAEIIRLWVATVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDPEKDTVAYDELGSVDRYMMVRLNQIIKQVKTAYDAYDFATVEKTISSFLVNDLSAFYLDVAKDVVYIEAKDDPKRRGMQTVMFAALLTVTKLITPILPHTAEEVWPYLKQPEAYAALADMPEAEQFDDESQLLDIWSGFMDFRSEVQKALELARDNKVIGKSLEAAVTVYPSEPVRDMLDDVDANVMQLLITSHFEIAPATTKAPADAEQFDDMAVVVKHADGEVCPRCRMVRTDIGTDPKLPQLCSRCAAIVEANFPDAVTNGFDK

Annotated regions:
phrase: DRYMMVRLNQIIKQVKTAYDAYDFATVEKTISSFLVNDLSAFYLDVAKDVVYIEAKDDPKRRGMQTVMFAALLTVTKLITPILPHTAEEVWPYLKQPEAYAALADMPEAEQFDDESQLLDIWSGFMDFRSEVQKALELARDNKVIGKSLEAA
type: DOMAIN
name: M/V/L/I-tRNA-synth_anticd-bd
description: Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding

phrase: WQKKWDEDHVYEQRQKLNEGKPTFMLHDGPPFANGNIHMGHALNKISKDIIVRYKSMNGFRAPYVPGWDTHGLPIEQQLAKQGVKRKEMSMTDYRELCRQFAMQEIDKQRTDFKRLGVMGDWEHPYITLQHHYEASEIRVFGAMAKKGYIYHGLKPVYWSWSSESTLAEAEIEYHDDKSPSIYVAFKVVDGKGLLDTDTYLVIWTTTPWTIPANYGITVNPRFDYVQVQVGDKKYVVAAELLDRVAEEIGWENPKILKTFKGTDMDKMTAQHPLYDRTSLVMNADHVTLDAGTGLVHTAPGHGEDDYKVGVKYGLPVVSVVDAKGYMNEYAPGFEGVFYDDANKQITQALADKGALLKLDFFTHSYPHDWRTKKPVIFRATTQWFASIDAFRDQILKAIDTVDFKPSWGKTRLYNMIRDRGDWVISRQRAWGVPLPIFYAEDGEPIIEEETINHVADLFGKYGSNVWFEREAKDLLPEGYTNPHSPNGQFTKEKDIMDVWFDSGSSHQAVLAARPELSFPADLYLEGSDQYRGWFNSSLITSVAATGVAPYRGILSQGFTLDGKGRKMSKSLGNTIVPATIEKQFGAEIIRLWVATVDSSSDVRV
type: DOMAIN
name: aa-tRNA-synth_Ia
description: Aminoacyl-tRNA synthetase, class Ia

phrase: VSVDNFAQTSEAYRKIRNTMRFMVANTGDFDPEKDTVAYDELGSVDRYMMVRLNQIIKQVKTAYDAYDFATVEKTISSFLVNDLSAFYLDVAKDVVYIEAKDDPKRRGMQTVMFAALLTVTKLITPILPHTAEEVWPYLKQPEAYAALADMPEAEQFDDESQLLDIWSGFMDFRSE
type: DOMAIN
name: Anticodon_Ile_BEm
description: Isoleucyl tRNA synthetase type 1, anticodon-binding domain

phrase: PFANGNIHMGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: GEVCPRCRMVRTDIGTDPKLPQLCSRC
type: DOMAIN
name: Znf_FPG/IleRS
description: Zinc finger, FPG/IleRS-type
Protein sequence:
MANITVKLVRSRYGNTPKQRATLASLGLKKIRQERSFEKTDTLVGMIAKVQHLVEVTES

Annotated regions:
phrase: TVKLVRSRYGNTPKQRATLASLGLKKIRQERSFEKTDTLVGMIAKVQHL
type: DOMAIN
name: Ribosomal_uL30_ferredoxin-like
description: Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain

phrase: TLASLGLKKIRQERSFEKTDTLVGMIAKVQHL
type: CONSERVED_SITE
name: Ribosomal_uL30_CS
description: Large ribosomal subunit protein uL30, conserved site