nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MFEKRPRLFKNRDVLSPLFVPDTLQDRKEEVGAISQYLGYILDGATPPHLLIVGPPGSGKTVTTKYVINELEKHTSDAVIEYIVADGTAYQVATSIARAPRRGLGFLNIVEKIRERASEGKMIIVMDEIDKTLSRDGDKLLYHLSREPNVCIVGLSNKLTVMDMIGDSGVISSFKPRRISFAPYSAPQLEEILNYRVEMAFNDGVLEDDVVPLCAALAAQRNGDARYALDLLSFAADIAIRQLKGVVSESDVRMATDEVEVEFIRRSIEQLRDNQKILLYAVMTSHGGTPTEIYRKYNKMTEEQFGGNALTQRRLSQLLRELELYGLVEIEVVGRGRGRGVNWHVVPSSSIDPELMLEAIRRSL

Annotated regions:
phrase: TPPHLLIVGPPGSGKTVTTKYVINELEKHTSDAVIEYIVADGTAYQVATSIARAPRRGLGFLNIVEKIRERASEGKMIIVMDEIDKTLSRDGDKLLYHLSREPNVCIVGLSNKLTVMDMIGDSGVISSFKPRRISFAPY
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: SIEQLRDNQKILLYAVMTSHGGTPTEIYRKYNKMTEEQFGGNALTQRRLSQLLRELELYGLVEIEVVGRGRGR
type: DOMAIN
name: Cdc6_C
description: Cdc6, C-terminal

phrase: LYAVMTSHGGTPTEIYRKYNKMTEEQFGGNALTQRRLSQLLRELELYGLVEIEVVGRGRGRGVNWHVVPSSSIDPELMLEA
type: DOMAIN
name: Cdc6_C
description: Cdc6, C-terminal

phrase: PHLLIVGPPGSGKTVTTKYVINELEKHTSDAVIEYIVADGTAYQVATSIARAPRRGLGFLNIVEKIRERASEGKMIIVMDEIDKTLSRDGDKLLYHLS
type: DOMAIN
name: AAA_22
description: ORC1/DEAH AAA+ ATPase domain

phrase: EILNYRVEMAFNDGVLEDDVVPLCAALAAQRNGDARYALDLLSFAADIAIRQLKGVVSESDVRMA
type: DOMAIN
name: Cdc6_lid
description: Cdc6, AAA+ ATPase-type lid domain
Protein sequence:
MAPSSEAGFMMSDAPSIAPAHRRNLGFPSSSSTRPRGPPSENPGAPSEDGTEGFADDQMPRTARGNGQGFVPRVQDRIGVLVQEHFAAFVESFTEEPVLAAAPTSSAVTTDKLYIAQIRAMRAYSLSTFYVDFKHLASWENGSLADGVMRQYYRFLPFITAALNELLAKYEPQYYRDHRQPTSTSSAVSTSAASQVGSGTQSDSTHRMNERQQTDKLFSVAFYNLPLVSRVRSLRAANIGQLLSISGTVTRTSEVRPELSLATFVCEACRAVVQNVEQTFRYTEPTQCPNASCQNRLAWQLDIRRSTFVDWQKVRIQENSSEIPTGSMPRTMDVILRGEIVDRAKAGEKCIFTGALIVVPDVSQLGLPGLKPSAIRDDRGAPRGSEAGGAGISGLKALGVRDLTYRLAFLACMVSADTTSAGRSAAAGAMDAIAALTRNTDPDDKQSVEQTQATILSSMNNAEIEDLRVMVHGDHIYSRLVQSIAPMVYGHEVVKKGLLLQLMSGVSKTTPEGMQLRGDINICIVGDPSTSKSQFLKHRPPLV

Annotated regions:
phrase: IEDLRVMVHGDHIYSRLVQSIAPMVYGHEVVKKGLLLQLMSGVSKTTPEGMQLRGDINICIVGDPSTSKSQFLK
type: DOMAIN
name: MCM_dom
description: MCM domain

phrase: VRSLRAANIGQLLSISGTVTRTSEVRPELSLATFVCEACRAVVQNVEQTFRYTEPTQCPNASCQNRLAWQLDIRRSTFVDWQKVRIQENSSEIPTGSMPRTMDVILRGEIVDRAKAGEKCIFTGALIVV
type: DOMAIN
name: MCM_OB
description: MCM OB domain

phrase: IYSRLVQSIAPMVYGHEVVKKGLLLQLMSGVSKTTPEGMQLRGDINICIVGDPSTSKSQFLKHRPPL
type: DOMAIN
name: MCM_dom
description: MCM domain

phrase: QEHFAAFVESFTEEPVLAAAPTSSAVTTDKLYIAQIRAMRAYSLSTFYVDFKHLASWENGSLADGVMRQYYRFLPFITAALNELLAKYEPQYYRDHRQPTSTSSAVSTSAASQVGSGTQSDSTHRMNERQQTDKLFSVAFY
type: DOMAIN
name: MCM_N
description: MCM, N-terminal domain
Protein sequence:
MSRALDPHTDFIPRHIGPTAADQEKMLAAIGCGSLDALLQEVVPPAIRSQGPLALPASRSESDVLADLKAVAGRNRIYRNYIGQGYYGTHTPNVVLRNVLENPAWYTAYTPYQPEISQGRLEALLNYQTMVADLTGLDISNASLLDEGTAAAEAMTLARRGSKSASQVFFVSAHCHPQTIEVVRTRAEGLGIEVALGDEAQGLPECFGVLLQYPHSLGGVADYRALAEAAHAQGAVVACATDLLALALMTPPGEWGADIAIGSSQRFGVPFGFGGPHAGFMACKDAYKRNMPGRLVGVSKDAQGNPALRLALQTREQHIRREKATSNICTAQVLLAVMAGLYAVWHGPDGIRRIATRVHRYTAILRAALTQLGIKVVNDTFFDTLLLETGVATPAIVEAAVCEHINLRRVDGARLAVSLDETVTAADLQALVNVFAAGLQKDDLALDIDAHDAAAPGGIPAALQRQGGILAHPVFSSIQSETDMLRYLRKLADKDLALDRSMIPLGSCTMKLNATAEMIPITWPEFALIHPYAPADQSAGYRELIERLSKALCEITGYDDISLQPNSGAQGEYAGLLAIRGYHRANGQAQRNVCLIPASAHGTNPASAQLAGMEVVVVASDANGNVDLDDLRAKLTQVGDRLAALMITYPSTHGVFEESITHICDLVHQAGGQVYLDGANMNAMVGVARPGKFGSDVSHLNLHKTFCIPHGGGGPGVGPVAVRSHLAPFLPGVLNAQGKLGGETGIGPVAAAPYGSAGILPISYAYIALMGADGLRRATEVAILNANYVAARLRDYYPVLYAGRNGRVAHECILDVRPLKDSSGISAEDIAKRLMDYGFHAPTMSFPVAGTLMVEPTESEGLAELERFIDAMIAIREEIAQVERGERDRDDNVLKNAPHTAQMLLAEEWLHDYPRQQAAYPVASLRDAKYWPPVARVDNAYGDRNLVCACLPVEAYA

Annotated regions:
phrase: ATEVAILNANYVAARLRDYYPVLYAGRNGRVAHECILDVRPLKDSSGISAEDIAKRLMDYGFHAPTMSFPVAGTLMVEPTESEGLAELERFIDAMIAIREEIAQVERGERDRDDNVLKNAP
type: DOMAIN
name: GDC-P_C
description: Glycine dehydrogenase, C-terminal domain

phrase: PVFSSIQSETDMLRYLRKLADKDLALDRSMIPLGSCTMKLNATAEMIPITWPEFALIHPYAPADQSAGYRELIERLSKALCEITGYDDISLQPNSGAQGEYAGLLAIRGYHRANGQAQRNVCLIPASAHGTNPASAQLAGMEVVVVASDANGNVDLDDLRAKLTQVGDRLAALMITYPSTHGVFEESITHICDLVHQAGGQVYLDGANMNAMVGVARPGKFGSDVSHLNLHKTFCIPHGGGGPGVGPVAVRSHLAPFLPGV
type: DOMAIN
name: GDC-P_N
description: Glycine cleavage system P-protein, N-terminal domain

phrase: RHIGPTAADQEKMLAAIGCGSLDALLQEVVPPAIRSQGPLALPASRSESDVLADLKAVAGRNRIYRNYIGQGYYGTHTPNVVLRNVLENPAWYTAYTPYQPEISQGRLEALLNYQTMVADLTGLDISNASLLDEGTAAAEAMTLARRGSKSASQVFFVSAHCHPQTIEVVRTRAEGLGIEVALGDEAQGLPECFGVLLQYPHSLGGVADYRALAEAAHAQGAVVACATDLLALALMTPPGEWGADIAIGSSQRFGVPFGFGGPHAGFMACKDAYKRNMPGRLVGVSKDAQGNPALRLALQTREQHIRREKATSNICTAQVLLAVMAGLYAVWHGPDGIRRIATRVHRYTAILRAALTQLGIKVVNDTFFDTLLLETGVATPAIVEAAVCEHINLRRVDGARLAVSLDETVTAADLQALVNV
type: DOMAIN
name: GDC-P_N
description: Glycine cleavage system P-protein, N-terminal domain
Protein sequence:
MSNTLRPYLNAVRSTLTASLALEEFSSEIVERQSQPEVEVGRSPEILLKPLVVSRNEQEQCLIESSVNSVRFSIRIKQVDEIERILVRKFMQFLMGRAESFFILRRKPVQGYDISFLITNYHTEEMLKHKLVDFIIEFMEEVDAEISEMKLFLNGRARLVAETYLSCF

Annotated regions:
Protein sequence:
MIELLFLLLPIAAAYGWYMGRRSAKKDQDDISNKLSRDYVTGVNFLLSNQTDKAVDLFLDMLQKQEIENEIESHSQFEAELTLGNLFRSRGEVDRALRIHQALDLSPNYTFEQKLLAKQQLARDFMVVGFFDRAENLYILLVDEPEFAENALQQLLVIYQKTKEWKKAVNIAEKLAKIKPQENNIELAQCYCEYSQSLEPESAVEKRSVLQKALSVSPTCVRASLLLANLAMLDGQYQQAVKILENVLEQNPDYTGEILLPLKHCYEELNQLDNFELFLIRAGQIINNDEVELALAKLIEEKDGKSAAQAKLYQQLTKKPSTLIFHRFMQYQIDDAEDGRGKESLILLHKMVGERIKQTSPYRCTNCGYQIHKLLWNCPSCRQWESIKPVSNQEHN

Annotated regions:
phrase: LGNLFRSRGEVDRALRIHQALD
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: VRASLLLANLAMLDGQYQQAVKILENVLEQNPD
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: FEAELTLGNLFRSRGEVDRALRIHQALDLSPN
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: ENALQQLLVIYQKTKEWKKAVNIAEKLAKIKPQ
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: VRASLLLANLAMLDGQYQQAVKILENVLEQNPD
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: YRCTNCGYQIHKLLWNCPSCRQWESIK
type: DOMAIN
name: Rubredoxin_2
description: LapB, rubredoxin metal binding domain
Protein sequence:
MATKYPKFSRDLAQDPTTRRIWYAIATGNDFESHDGITEENLYQKIFATHFGHVAIIFLWASSLLFHVAWQGNFEQWIKDPLHIRPIAHAIWDPHFGEPAIEAFSQGGANYPVNIAYSGVYHWWYTIGMRTNNDLYQGSIFLLLLAALFLFAGWLHLQPKFRPSLTWFKSAEPRLNHHLAGLFGVSSLAWAGHLIHVAIPESRGVHVGWRNFLTTLPHPAGLTPFWMGNWGVYAENADTTGHIFGTSQGAGTAILTFLGGFHPQTESLWLTDMAHHHLAIAVIFIIAGHMYRTNFGIGHSIKEMLNARQFFGIRTEGQFNLPHQGLYDTYNNSLHFQLSIHLAALGTALSLVAQHMYSLPPYAFIAKDFTTQAALYTHHQYIAGFLMVGAFAHAGIFWVRDYDPEQNQGNVLDRVLKHKEAIISHLSWVSLFLGFHTLGLYVHNDVVVAFGTPEKQILIEPVFAQFIQAAHGKLLYGMDTLLSNPDSIAYTAWPNHANVWLPNWLEAINSGTNSLFLTIGPGDFLVHHAIALGLHTTTLICVKGALDARGTKLMPDKKDFGFTFPCDGPGRGGTCQTSSWEQSFYLALFWMLNLLGWVTFYWHWKHLGVWQGNVAQFNENSTYLMGWFRDYLWANSAQLINGYNPYGTNNLSVWAWMFLFGHLVWATGFMFLISWRGYWQELIETLVWAHERTPLANLVRWKDKPVALSIVQGWLVGLAHFTVGYILTYAAFLIASTAGKFG

Annotated regions:
phrase: CDGPGRGGT
type: CONSERVED_SITE
name: PSI_PsaA/B_CS
description: Photosystem I PsaA/PsaB, conserved site
Protein sequence:
MPIQNSPYKAFATLLNSGGHQVSPAELHGLLLGRSCAGAGFDNEGWFADASVLLETEPQDNIRQALIGLQEMVKGELTGDDMTVVLLLPGDDEPLTERAAALGQWCQGFLAGFGLAIGDKTLGTEAKDVLEDLAAIAQVQDALDESEDGETDYMEVMEYMRVAPLLLFTEFNEPAAPQPKPSLH

Annotated regions:
Protein sequence:
MAQAKKKSTAKKKTASKKRTNSRKKKNDNPIRYVIAILVVVLMVLGVFQLGIIGRLIDSFFNYLFGYSRYLTYILVLLATGFITYSKRIPKTRRTAGSIVLQIALLFVSQLVFHFNSGIKAEREPVLSYVYQSYQHSHFPNFGGGVLGFYLLELSVPLISLFGVCIITILLLCSSVILLTNHQHRDVAKVALENIKAWFGSFNEKMSERNQEKQLKREEKARLKEEQKARQNEQPQIKDVSDFTEVPQERDIPIYGHTENESKSQCQPSRKKRVFDAENSSNNIVNHQADQQEQLTEQTHNSVESENTIEEAGEVTNVSYVVPPLTLLNQPAKQKATSKAEVQRKGQVLENTLKDFGVNAKVTQIKIGPAVTQYEIQPAQGVKVSKIVNLHNDIALALAAKDVRIEAPIPGRSAVGIEVPNEKISLVSLKEVLDEKFPSNNKLEVGLGRDISGDPITVPLNEMPHLLVAGSTGSGKSVCINGIITSILLNAKPHEVKLMLIDPKMVELNVYNGIPHLLIPVVTNPHKAAQALEKIVAEMERRYDLFQHSSTRNIKGYNELIRKQNQELDEKQPELPYIVVIVDELADLMMVAGKEVENAIQRITQMARAAGIHLIVATQRPSVDVITGIIKNNIPSRIAFAVSSQTDSRTIIGTGGAEKLLGKGDMLYVGNGDSSQTRIQGAFLSDQEVQDVVNYVVEQQQANYVKEMEPDAPVDKSEMKSEDALYDEAYLFVVEQQKASTSLLQRQFRIGYNRASRLMDDLERNQVIGPQKGSKPRQVLIDLNNDEV

Annotated regions:
phrase: GDPITVPLNEMPHLLVAGSTGSGKSVCINGIITSILLNAKPHEVKLMLIDPKMVELNVYNGIPHLLIPVVTNPHKAAQALEKIVAEMERRYDLFQHSSTRNIKGYNELIRKQNQELDEKQPELPYIVVIVDELADLMMVAGKEVENAIQRITQMARAAGIHLIVATQRPSVDVITGIIKNNIPSRIAFAVSSQTDS
type: DOMAIN
name: FtsK_dom
description: FtsK domain

phrase: MKSEDALYDEAYLFVVEQQKASTSLLQRQFRIGYNRASRLMDDLERNQVIGPQKGSKPRQVLIDL
type: DOMAIN
name: Ftsk_gamma
description: FtsK gamma domain

phrase: EMPHLLVAGSTGSGKSVCINGIITSILLNAKPHEVKLMLIDPKMVELNVYNGIPHLLIPVVTNPHKAAQALEKIVAEMERRYDLFQHSSTRNIKGYNELIRKQNQELDEKQPELPYIVVIVDELADLMMVAGKEVENAIQRITQMARAAGIHLIVATQRPSVDVITGIIKNNIPSRIAFAVS
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: SEDALYDEAYLFVVEQQKASTSLLQRQFRIGYNRASRLMDDLERNQVIGPQKGSKPRQVL
type: DOMAIN
name: Ftsk_gamma
description: FtsK gamma domain

phrase: SNNKLEVGLGRDISGDPITVPLNEMPHLLVAGSTGSGKSVCINGIITSILLNAKPHEVKLMLIDPKMVELNVYNGIPHLLIPVVTNPHKAAQALEKIVAEMERRYDLFQHSSTRNIKGYNELIRKQNQELDEKQPELPYIVVIVDELADLMMVAGKEVENAIQRITQMARAAGIHLIVATQRPS
type: DOMAIN
name: FtsK_dom
description: FtsK domain

phrase: PPLTLLNQPAKQKATSKAEVQRKGQVLENTLKDFGVNAKVTQIKIGPAVTQYEIQPAQGVKVSKIVNLHNDIALALAAKDVRIEAPIPGRSAVGIEVP
type: DOMAIN
name: FtsK_alpha
description: FtsK alpha domain
Protein sequence:
MGDVEKGKKIFVQKCAQCHTVEKGGKHKTGPNLNGIFGRKTGQAPGFTYTDANKNKGIIWGEDTLMEYLENPKKYIPGTKMIFAGIKKKGERADLIAYLKKATNE

Annotated regions:
phrase: GDVEKGKKIFVQKCAQCHTVEKGGKHKTGPNLNGIFGRKTGQAPGFTYTDANKNKGIIWGEDTLMEYLENPKKYIPGTKMIFAGIKKKGERADLIAYLKKA
type: DOMAIN
name: Cyt_c-like_dom
description: Cytochrome c-like domain

phrase: VEKGKKIFVQKCAQCHTVEKGGKHKTGPNLNGIFGRKTGQAPGFTYTDANKNKGIIWGEDTLMEYLENPKKYIPGTKMIFAGIKKKGERADLIAYLK
type: DOMAIN
name: Cyt_c-like_dom
description: Cytochrome c-like domain
Protein sequence:
MFQIGEALMGQGAELAHVDLMIGDKGGPVGQAFANGLTQLSVGHTPLLSVIRPNLPPKPSTLIIPKVTVKNMEQAGKIFGPAQAAVAKAVADSVEEGVISKDQVEEIVIVASVFIHPDAQDYNKIYRYNYGATKLAIKRALGGFPDINTVLEESNKSTHAIMGFKVTRLWDPPYLQVAFDNPDIEFVQSAISQIPKSDHVIIEAGTPLIKRYGMDVISRIREVRPDAFIVADLKTLDTGNLEARMVADAAGDAIVVSALAPISTIDKLIEEAHKTGIYAVMDTLNQQDPISVLKQLKVMPDVIELHRGIDIEATEHAWGNIAEIKKIAPKILVAVAGGVRLDKVPVALGQGADILVVGRAITNSKDVREVAEQFINSLNKPEIDQFRVMTDF

Annotated regions:
phrase: FQIGEALMGQGAELAHVDLMIGDKGGPVGQAFANGLTQLSVGHTPLLSVIRPNLPPKPSTLIIPKVTVKNMEQAGKIFGPAQAAVAKAVADSVEEGVISKDQVEEIVIVASVFIHPDAQDYNKIYRYNYGATKLAIKRALGGFPDINTVLEESNKSTHA
type: DOMAIN
name: HCHO-activating_enzyme
description: Formaldehyde-activating enzyme

phrase: PYLQVAFDNPDIEFVQSAISQIPKSDHVIIEAGTPLIKRYGMDVISRIREVRPDAFIVADLKTLDTGNLEARMVADAAGDAIVVSALAPISTIDKLIEEAHKTGIYAVMDTLNQQDPISVLKQLKVMPDVIELHRGIDIEATEHAWGNIAEIKKIAPKILVAVAGGVRLDKVPVALGQGADILVVGRAITNSKDVREVAEQ
type: DOMAIN
name: OMPdeCOase_dom
description: Orotidine 5'-phosphate decarboxylase domain

phrase: PYLQVAFDNPDIEFVQSAISQIPKSDHVIIEAGTPLIKRYGMDVISRIREVRPDAFIVADLKTLDTGNLEARMVADAAGDAIVVSALAPISTIDKLIEEAHKTGIYAVMDTLNQQDPISVLKQLKVMPDVIELHRGIDIEATEHAWGNIAEIKKIAPKILVAVAGGVRLDKVPVALGQGADILVVGRAITNSKDVREVAEQ
type: DOMAIN
name: HPS/KGPDC
description: HPS/KGPDC domain

phrase: IGEALMGQGAELAHVDLMIGDKGGPVGQAFANGLTQLSVGHTPLLSVIRPNLPPKPSTLIIPKVTVKNMEQAGKIFGPAQAAVAKAVADSVEEGVISKDQVEEIVIVASVFIHPDAQDYNKIYRYNYGATKLAIKRALGGFPDINTVLEESNKSTHAI
type: DOMAIN
name: HCHO-activating_enzyme
description: Formaldehyde-activating enzyme

phrase: YLQVAFDNPDIEFVQSAISQIPKSDHVIIEAGTPLIKRYGMDVISRIREVRPDAFIVADLKTLDTGNLEARMVADAAGDAIVVSALAPISTIDKLIEEAHKTGIYAVMDTLNQQDPISVLKQLKVMPDVIELHRGIDIEATEHAWGNIAEIKKIAPKILVAVAGGVRLDKVPVALGQGADILVVGRAITNSKDVREVAEQ
type: DOMAIN
name: OMPdeCOase_dom
description: Orotidine 5'-phosphate decarboxylase domain
Protein sequence:
METTEPGQADGEERMMDLRPRTRSNPEGAEDRRSSTGSLNSSLPSAPQPAVGSRVEGEGEAASSDSPPVSATAIAATASVPVAAVGNTTTTNTASLPAMSPAVKERPKPSQPTMPTQIPPSAELHLRAPRVNCPEKVIICLDLSEEMSLQKLESINGSKTNALNISQKMIEMFVRTKHKIDKRHEFALVVVNDDAMWLSGFTSDPRELCSCLYDLETNVCESFNLEDLFNVILQKIELPQMENIQTIPPPFVVRTLLVFSRHAGMLQFNPSDAVKKMLQSPYFFFDVVFLHNGTEEQTEDTSWKDVYASFCELDTKGMCYRFEVSLCGPAIELHNCMAKLLCHPLQRPFQSHASYSLLEDEDTLENEATV

Annotated regions:
Protein sequence:
MKTDIQIAQEAQMKHIKDVAELIDIHEDDLELYGKYKAKVSLDVLDQLKDKPDGKLVLVTAINPTPAGEGKTTTNIGLSMGLNKLGKKTSTALREPSLGPSFGVKGGAAGGGYAQVVPMADINLHFTGDFHAITSAHSLLAALVDNHLHHGNALRIDTNRIVWKRVVDMNDRALRKIVVGLGGKAQGITREDGFDITVASEIMAILCLANDREDLKERLGNMVVAYNVDGDAVRAKDLEAQGALTLILKDAINPNIVQTLENTPAFIHGGPFANIAHGCNSVLATKLALKTGDYAVTEAGFGADLGAEKFFDIKCRYAGLNPDVAVIVATVRALKMHGGVAKEDLGTENLDALAKGMTNLERHIENVAKFGVPSVVAINAFPTDTEAEKQLVFDKCKEMGVDVAISDVFAKGGDGGVELAQKVIDVCENKKSDFKVLYDVEESIPEKITKIAKEIYRADKVNFSKAAKKQIAELEKLGLDKLPICMAKTQYSFSDDPALLGAPEGFELTIRDLELAAGAGFIVALTGDIMRMPGLPKVPAANRMDVLPNGEIIGLF

Annotated regions:
phrase: VATVRALKMHG
type: CONSERVED_SITE
name: Formate_THF_ligase_CS
description: Formate-tetrahydrofolate ligase, FTHFS, conserved site

phrase: GVKGGAAGGG
type: CONSERVED_SITE
name: Formate_THF_ligase_CS
description: Formate-tetrahydrofolate ligase, FTHFS, conserved site
Protein sequence:
MILKNVKLKSGEITVPGDKSLSHRSVLFAALCKGKSKVTGFLEAEDPLNTMSAFTKLGLKVRKVKPGEYEFESPGKRGFISPNVDLDFGNAGTGIRLSAGLLCGLPGVNAVLTGDGSLKKRPMGRIIKPLTAMGASILGLGEKETAPLKVEGKKLKSFRYESPIASAQIKSCLMLAAIASETDLEYSENILSRDHTENMFRFLGNKIEQISPFHFKIEPPYVLNGGEFKVPGDISSAAFFLVLGVLAKEGNLLVRNIGLNPARIGILKALELMGAKIEIRNQRMECGEPVGDLKTYPSILNKTNIPKSLIPSIIDEIPILSVAGLFAKGGFEIRHAEELRAKESDRIHTMVSNFRALGIEVEEYPDGYAFDGTSPQSLEIWKFLASGKKISILSHMDHRITMSFLIFKTLSGFNLHIDETSWIETSFPGFEKLLESCLDE

Annotated regions:
phrase: SGEITVPGDKSLSHRSVLFAALCKGKSKVTGFLEAEDPLNTMSAFTKLGLKVRKVKPGEYEFESPGKRGFISPNVDLDFGNAGTGIRLSAGLLCGLPGVNAVLTGDGSLKKRPMGRIIKPLTAMGASILGLGEKETAPLKVEGKKLKSFRYESPIASAQIKSCLMLAAIASETDLEYSENILSRDHTENMFRFLGNKIEQISPFHFKIEPPYVLNGGEFKVPGDISSAAFFLVLGVLAKEGNLLVRNIGLNPARIGILKALELMGAKIEIRNQRMECGEPVGDLKTYPSILNKTNIPKSLIPSIIDEIPILSVAGLFAKGGFEIRHAEELRAKESDRIHTMVSNFRALGIEVEEYPDGYAFDGTSPQSLEIWKFLASGKKISILSHMDHRITMSFLIFKTLSGFNLHIDETSWIETSFPGFE
type: DOMAIN
name: Enolpyruvate_Tfrase_dom
description: Enolpyruvate transferase domain

phrase: RAKESDRIHTMVSNFRAL
type: CONSERVED_SITE
name: EPSP_synthase_CS
description: 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site
Protein sequence:
MTWQSDYSRDYEVKNHMECQNRSDKYIWSPHDAYFYKGLSELIVDIDRLIYLSLEKIRKDFVFINLNTDSLSEFINRDNEWLSAVKGKQVVLIAARKSEALANYWYYNSNIRGVVYAGLSRDIRKELAYVINGRFLRKDIKKDKITDREMEIIRMTAQGMQPKSIARIENCSVKTVYTHRRNAEAKLYSKIYKLVQ

Annotated regions:
phrase: ITDREMEIIRMTAQ
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: GMQPKSIARIENCSVK
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: TVYTHRRNAEAK
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: ITDREMEIIRMTAQGMQPKSIARIENCSVKTVYTHRRNAEAK
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: TDREMEIIRMTAQGMQPKSIARIENCSVKTVYTHRRNAEAK
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: KDIKKDKITDREMEIIRMTAQGMQPKSIARIENCSVKTVYTHRRNAEAKLYSKIYKLV
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: KDKITDREMEIIRMTAQGMQPKSIARIENCSVKTVYTHRRNAEAKLYSK
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal
Protein sequence:
MSQLTHINAAGEAHMVDVSAKAETVREARAEAFVTMRSETLAMIIDGRHHKGDVFATARIAGIQAAKRTWDLIPLCHPLMLSKVEVNLQAEPEHNRVRIETLCRLTGKTGVEMEALTAASVAALTIYDMCKAVQKDMVIGSVRLLAKSGGKSGDFKVEADD

Annotated regions:
phrase: MVDVSAKAETVREARAEAFVTMRSETLAMIIDGRHHKGDVFATARIAGIQAAKRTWDLIPLCHPLMLSKVEVNLQAEPEHNRVRIETLCRLTGKTGVEMEALTAASVAALTIYDMCKAVQKDMVIGSVRLLAKSG
type: DOMAIN
name: Mopterin_CF_biosynth-C_dom
description: Molybdopterin cofactor biosynthesis C (MoaC) domain
Protein sequence:
MTSSHLNFKNKHILVVGDVMLDRYWHGGTSRISPEAPVQVVKVSSVEDRPGGAANVALGLAKLGVRVSLVGVVGNDENAAALEVALKKEGVDCHFVVAESLPTITKLRVVSRHQQLIRLDFEEREDSLSQNQAIEEKVEQLLGDVNAVVFSDYAKGCLADVTTLIAHANAADVPSFVDPKGSDFSIYQGATLVKPNLVEFEAIVGECRDSKDIEQKGVELRERYGWQALLVTRGEDGLMLLEKNKAPFSLATAAKEVFDVTGAGDTVVAVLTAVFATSKRFSDAVDYANQAAGYVVGKLGTASIDAQTLDAIMFARSHSSNFGVLSPDDLKEQIRMAQLNGEKIVFTNGCFDILHPGHVAYIKQAKALGDRLIVAVNTDASVKRLKGEKRPVNDLVHRMAVLEGVGAIDWVTWFDEDTPLEIIKMLTPDILVKGGDYTVASIVGAEHVIEHGGEVKVLSFVDGYSTTSIIEKANS

Annotated regions:
phrase: MAQLNGEKIVFTNGCFDILHPGHVAYIKQAKALGDRLIVAVNTDASVKRLKGEKRPVNDLVHRMAVLEGVGAIDWVTWFDEDTPLEIIKMLTPDILVKGGDYTVASIVGAEHVIEHGGEVKVLSFVDGYSTTSIIEKA
type: DOMAIN
name: RfaE_dom_II
description: RfaE bifunctional protein, domain II

phrase: NFKNKHILVVGDVMLDRYWHGGTSRISPEAPVQVVKVSSVEDRPGGAANVALGLAKLGVRVSLVGVVGNDENAAALEVALKKEGVDCHFVVAESLPTITKLRVVSRHQQLIRLDFEEREDSLSQNQAIEEKVEQLLGDVNAVVFSDYAKGCLADVTTLIAHANAADVPSFVDPKGSDFSIYQGATLVKPNLVEFEAIVGECRDSKDIEQKGVELRERYGWQALLVTRGEDGLMLLEKNKAPFSLATAAKEVFDVTGAGDTVVAVLTAVFATSKRFSDAVDYANQAAGYVVGKLGTASIDAQTLD
type: DOMAIN
name: RfaE_dom_I
description: RfaE bifunctional protein, domain I

phrase: HILVVGDVMLDRYWHGGTSRISPEAPVQVVKVSSVEDRPGGAANVALGLAKLGVRVSLVGVVGNDENAAALEVALKKEGVDCHFVVAESLPTITKLRVVSRHQQLIRLDFEEREDSLSQNQAIEEKVEQLLGDVNAVVFSDYAKGCLADVTTLIAHANAADVPSFVDPKGSDFSIYQGATLVKPNLVEFEAIVGECRDSKDIEQKGVELRERYGWQALLVTRGEDGLMLLEKNKAPFSLATAAKEVFDVTGAGDTVVAVLTAVFATSKRFSDAVDYANQAAGYVVGKLGTASIDAQT
type: DOMAIN
name: RfaE_dom_I
description: RfaE bifunctional protein, domain I

phrase: IVFTNGCFDILHPGHVAYIKQAKALGDRLIVAVNTDASVKRLKGEKRPVNDLVHRMAVLE
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: FTNGCFDILHPGHVAYIKQAKALGDRLIVAVNTDASVKRLKGEKRPVNDLVHRMAVLEGVGAIDWVTWFDEDTPLEIIKMLTPDILVKGGDYTVASIVGAEHVIEHGGEVKVLSFVDGYSTTSII
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: KHILVVGDVMLDRYWHGGTSRISPEAPVQVVKVSSVEDRPGGAANVALGLAKLGVRVSLVGVVGNDENAAALEVALKKEGVDCHFVVAESLPTITKLRVVSRHQQLIRLDFEEREDSLSQNQAIEEKVEQLLGDVNAVVFSDYAKGCLADVTTLIAHANAADVPSFVDPKGSDFSIYQGATLVKPNLVEFEAIVGECRDSKDIEQKGVELRERYGWQALLVTRGEDGLMLLEKNKAPFSLATAAKEVFDVTGAGDTVVAVLTAVFATSKRFSDAVDYANQAAGYVVGKLGTA
type: DOMAIN
name: PfkB_dom
description: Carbohydrate kinase PfkB

phrase: GGAANVALGLAKLGVRVSLVGVV
type: CONSERVED_SITE
name: Carboh/pur_kinase_PfkB_CS
description: Carbohydrate/purine kinase, PfkB, conserved site
Protein sequence:
MQQSKEERVHDVFEKISDKYDVMNSVISFQRHKAWRKETMRIMDVKPGSKALDVCCGTADWTIALAGAVGEDGKVYGLDFSENMLAVGKQKVEALELKQVELIHGNAMELPYEDNTFDYVTIGFGLRNVPDYMQVLKEMTRVVKPGGKVICLETSQPTMIGFRQGYVLYFKYIMPLFGKMFAKSYKEYSWLQESASTFPGMKELACMFEEAGLKNVQVKPFTFGVAAMHLGIKPESK

Annotated regions:
phrase: YDVMNSVISFQRHKA
type: CONSERVED_SITE
name: UbiE/COQ5_MeTrFase_CS
description: UbiE/COQ5 methyltransferase, conserved site

phrase: RVVKPGGKVICLET
type: CONSERVED_SITE
name: UbiE/COQ5_MeTrFase_CS
description: UbiE/COQ5 methyltransferase, conserved site
Protein sequence:
MPMYEDRIDLYGADGKLLEEDVPLEAVSPLKNPTIANLVSDVKRSVAVNLAGIEGSLKKAALGGKSNFIPGREVELPIVENAEAIAEKVKRLVQTSEDDDTNIRLINNGQQILVQVPTTRMGVAADYTVSALVTGAAVVQAIIDEFDVDMFDANAVKTAVMGRYPQTVDFTGANLSTLLGPPVLLEGLGYGLRNIMANHVVAITRKNTLNASALSSILEQTAMFETGDAVGAFERMHLLGLAYQGLNANNLLFDLVKENSKGTVGTVIASLVERAIEDRVIKVASEMKSGYKMYEPADWALWNAYAATGLLAATIVNVGAARAAQGVASTVLYYNDILEYETGLPGVDFGRAMGTAVGFSFFSHSIYGGGGPGIFHGNHVVTRHSKGFALPCVAAAMCLDAGTQMFSVEKTSGLIGSVYSEIDYFREPIVNVAKGAAEIKDQL

Annotated regions:
phrase: DRIDLYGADGKLLEEDVPLEAVSPLKNPTIANLVSDVKRSVAVNLAGIEGSLKKAALGGKSNFIPGREVELPIVENAEAIAEKVKRLVQTSEDDDTNIRLINNGQQILVQVPTTRMGVAADYTVSALVTGAAVVQAIIDEFDVDMFDANAVKTAVMGRYPQTVDFTGANLSTLLGPPVLLE
type: DOMAIN
name: Me_CoM_Rdtase_bsu_N
description: Methyl-coenzyme M reductase, beta subunit, N-terminal

phrase: GYGLRNIMANHVVAITRKNTLNASALSSILEQTAMFETGDAVGAFERMHLLGLAYQGLNANNLLFDLVKENSKGTVGTVIASLVERAIEDRVIKVASEMKSGYKMYEPADWALWNAYAATGLLAATIVNVGAARAAQGVASTVLYYNDILEYETGLPGVDFGRAMGTAVGFSFFSHSIYGGGGPGIFHGNHVVTRHSKGFALPCVAAAMCLDAGTQMFSVEKTSGLIGSVYSEIDYFREPIVNVAKG
type: DOMAIN
name: Me_CoM_Rdtase_bsu_C
description: Methyl-coenzyme M reductase, beta subunit, C-terminal
Protein sequence:
MLKILFHTMTLFGHLLSTPVYMVGDACGKDRDEYRNPPLKAFSIESQFLQIENADFKTLPNQSLGYRQTDTMFFATLPVTDMSGFLVSARYLGAEVLWKSSKDLQNTDPHALGYFAFQDKSFYQYVSLSAGAYTLALTNWQWSVLFSGMVDPENIEMGSGVYQVVLSSKYHASEAFAVVIGVINEVGLHDKQAWPLLGFSYKPEDKLTLNCIYPVNFSAEYQCTSVCDLGAAYRLTRFRKKFPKNSLTTSEGIFEYSGREIEGSVKLIFWPGQSLKVFGGYSVGNDISLTNPHNEDEKIYKFGSSLFFGGSANLHF

Annotated regions:
Protein sequence:
MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLELPDGMGLIVRTAGVGKSAEALQWDLSFRLKHWEAIKKAAESRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVLELARQHISALGRPDFSSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDSTEALTAIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVENRLREAVRQDRARIQISHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNESMALSILRLIEEEALKENTKEVHAIVPVPIASYLLNEKRAAVSAIETRQGGDVRCIIVPNDQMETPHYHVLRVRKGEETSTLSYLLPKLHEEEMALPSEDEPAERKLPEQPALATFVMPEVPPAPTAEKPAAPAAPVKAATSAAPAAPGLLSRFFTALKNLFGGSEEPVVEPQPEKKEEKPARQQERRKPRQNNRRDRNDRNDRGDRGERNERRDNNRGDNEGREAREPREGREGREDNRRNRREKPQQNVETRDNRQQNIAEDSDKAKSRDEQQPRRERNRRRNNDEKRQTQQEAKPQVRGDIVADDNAQEERVQTMPRRKQRQLTQKIRIETAEETAARETFEDDIPQE

Annotated regions:
phrase: KKANIYKGKITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTT
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: SLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLELPDGMGLIVRTAGVGKSAEALQWDLSFRLKHWEAIKKAAESRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVLELARQHISALGRPDFSSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDSTEALTAIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVENRLREAVRQDRARIQISHISRFGLLEMSRQ
type: DOMAIN
name: RNA-bd_AU-1/RNase_E/G
description: RNA-binding protein AU-1/Ribonuclease E/G

phrase: VCPRCSGTGTVRDNESMALSILRLIEEEALKENTKEVHAIVPVPIASYLLNEKRAAVSAIETRQGGDVRCIIVPNDQMETPHYHVL
type: DOMAIN
name: RNase_E_G_thioredoxin-like
description: RNase E/G, thioredoxin-like domain

phrase: ANIYKGKITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTT
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: QKKANIYKGKITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIVQIDKEERGNKGAAL
type: DOMAIN
name: S1_domain
description: S1 domain
Protein sequence:
MTRILVQRGSSGSSSNSSRPSSSSSSSSGSETQINNNIPVPPVTIDEEITDEKQEEVTVVEKAECSDAKDVAVDSDEPADREDDEGLVVAENVHVQSEGIDCDSPVSGGSNSDSPPVPAPPPKPSSTVNPGSNRSVLGSFGALRIGPTRRAAGPRSLVSSRSSPTGSHPSSPRSHSENEGYNSSDEHMPCYVPSHPGSGLEREHQFEAEIRYSKGFEIRRMLEDGNCLFRAVADQVYGDSEAYDLARQMCMDYMEQERDHFSQFITEGFTSYLKRKRRDKVYGNNVEIQALAEMYNRPIHIYSYSTEPINIFQGNYSTDTPPIRLSYHHGNHYNSLVDPHRLTVGAGLGFSSLSGRHVDKEQVKAAIKAQQEHQIDNALLAEGRFYSDLELTEKEIERSVMEASRAEYLMEWSKPRIGPKESSTSNAETSSSGARPSGSDSKPAEAVKEKTVLSSSIEMVLSMGFSYAQAMEAYSIFGDDVDSMVCYVLETSCGGNNRRKGKATE

Annotated regions:
phrase: FEIRRMLEDGNCLFRAVADQVYGDSEAYDLARQMCMDYMEQERDHFSQFITEGFTSYLKRKRRDKVYGNNVEIQALAEMYNRPIHIYSYSTEPINIFQGNYSTDTPPIRLSYHHGNHYNSLVD
type: DOMAIN
name: OTU_dom
description: OTU domain

phrase: DGNCLFRAVADQVYGDSEAYDLARQMCMDYMEQERDHFSQFITEGFTSYLKRKRRDKVYGNNVEIQALAEMYNRPIHIYSYSTEPINIFQGNYSTDTPPIRLSYHHGNH
type: DOMAIN
name: OTU_dom
description: OTU domain

phrase: AVKEKTVLSSSIEMVLSMGFSYAQAMEAYSIFGDDVDSMVCYVLE
type: DOMAIN
name: UBA
description: Ubiquitin-associated domain
Protein sequence:
MMNRVKIGTALLGLTLAGIALPALAQPQSGPQTGVVFRNTVTGEALDVSQGKEGGRDTPAVKKFLETGENLYIDDKSCLRNGESLFATSCSGCHGHLAEGKLGPGLNDNYWTYPSNTTDVGLFATIFGGANGMMGPHNENLTPDEMLQTIAWIRHLYTGPKQDAVWLNDEQKKAYTPYKQGEVIPKDAKGQCKPLDE

Annotated regions:
phrase: RNGESLFATSCSGCHGHLAEGKLGPGLNDNYWTYPSNTTDVGLFATIFGGANGMMGPHNENLTPDEMLQTIAW
type: DOMAIN
name: Cyt_c-like_dom
description: Cytochrome c-like domain

phrase: SCLRNGESLFATSCSGCHGHLAEGKLGPGLNDNYWTYPSNTTDVGLFATIFGGANGMMGPHNENLTPDEMLQTIAWIRHL
type: DOMAIN
name: Cyt_c-like_dom
description: Cytochrome c-like domain
Protein sequence:
MQNAPESVLNALVPMVVEQTAKGERSYDIYSRLLKERVIFLVGQVEEHMANLIVAQLLFLESESPDKDIYLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGAEGKRHCLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKNKLNQMLADHTGQPMEIIERDTDRDNFMSAAEAAEYGLVDSVLSKRG

Annotated regions:
phrase: RHCLPNSRVMIHQ
type: ACTIVE_SITE
name: ClpP_His_AS
description: ClpP, histidine active site

phrase: TVCIGQAASMG
type: ACTIVE_SITE
name: ClpP_Ser_AS
description: ClpP, Ser active site
Protein sequence:
MPLHRLHGLYAITDPALTPDEHLLPAAEAALRGGAKLLQYRDKTASPTQREYRAAQLRQLCHQYHALFIVNDDPALAAQVNADGVHIGQSDGGIKAARDQLGGSRIIGVTCHGDLTLAARAAEAGADYLAMGRFFTSHTKPLAPPASLALLRQACQQFHQPVVAIGGVNPDNAPQLINAGAVSVAVIHALFGQTDTDAIEAAARQLSACFQTNRSAP

Annotated regions:
phrase: LYAITDPALTPDEHLLPAAEAALRGGAKLLQYRDKTASPTQREYRAAQLRQLCHQYHALFIVNDDPALAAQVNADGVHIGQSDGGIKAARDQLGGSRIIGVTCHGDLTLAARAAEAGADYLAMGRFFTSHTKPLAPPASLALLRQACQQFHQPVVAIGGVNPDNAPQLINAGAVSVAVIHA
type: DOMAIN
name: ThiamineP_synth_TenI
description: Thiamine phosphate synthase/TenI

phrase: LYAITDPALTPDEHLLPAAEAALRGGAKLLQYRDKTASPTQREYRAAQLRQLCHQYHALFIVNDDPALAAQVNADGVHIGQSDGGIKAARDQLGGSRIIGVTCHGDLTLAARAAEAGADYLAMGRFFTSHTKPLAPPASLALLRQACQQFHQPVVAIGGVNPDNAPQLINAGAVSVAVIHALFGQTDTDAIEAAARQLS
type: DOMAIN
name: ThiamineP_synth_TenI
description: Thiamine phosphate synthase/TenI