nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSTTPAPANPKVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDSAKAESLEVIGEAIKENGKVIVTGCMGVEEGNIRDVHPSVLAVTGPQQYEQVVNAVHEVVPPKQDHNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDEAQRLVKSGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSTLGVWVRLHYVYPYPHVDELIPLMAAGKILPYLDIPFQHASPKVLKSMKRPAFEDKTLARIKNWREICPDLIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLDLEVVPDDVKQDRWERFMAHQQAISSARLQLRIGREIEVLVDEVDEQGAVGRCFFDAPEIDGNVFIDNGSNLKPGDKVWCKVTDADEYDLWAEQI

Annotated regions:
phrase: ANPKVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDSAKAESLEVIGEAIKENGKVIVTGCMGVEEGNIRDVHPSVLAVTGPQQYEQVVNAVHEVVPPKQDHNPLIDLVPPQGIKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDEAQRLVKSGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSTLGVWVRLHYVYPYPHVDELIPLMAAGKILPYLDIPFQHASPKVLKSMKRPAFEDKTLARIKNWREICPDLIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLDLEVVPDDVKQDRWERFMAHQQAISSARLQLRIGREIEVLVDEVDEQGAVGRCFFDAPEIDGNVFIDNGSNLKPGDKVWCKVTDADEYDLWAE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: PKVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDSAKAESLEVIGEAIKENGKVIVTGCMGVEEGNIRDVHPSVLAVTGPQQYEQVVNAVHEVV
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: LTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDEAQRLVKSGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSTLGVWVRLHYVYPYPHVDELIPLMAAGKILPYLDIPFQHASPKVLKSMKRPAFEDKTLARIKNWREICPDLIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLDLEVVPDDVKQDRWERFMAHQQAISSA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: HYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDEAQRLVKSGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSTLGVWVRLHYVYPYPHVDELIPLMAAGKILPYLDIPFQHASPKVLKSMKRPAFEDKTLARIKNWREICPDLIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLDLEVVPDDVKQDRWERFM
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: KVGFVSLGCPKALVDSERILTQLRMEGYDVVSTYQDADVVVVNTCGFIDSAKAESLEVIGEAIKENGKVIVTGCMGVEEG
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: KISEGCNHSCSFCIIPSMRGKLVSRPVGDVLDEAQRLVKSGVKELLVISQDTSAYGVDVKYRTGFWNGAPVKTRMTELCEALSTLGVWVRLHYVYPYPHVDELIPLMAAGKILPYLDIPFQHASPKVLKSMKRPAFEDKTLARIKNWREICPDLIIRSTFIVGFPGETEEDFQYLLDW
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LKISEGCNHSCSFCIIPSMR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: QLRIGREIEVLVDEVDEQGAVGRCFFDAPEIDGNVFIDNGSNLKPGDKVWCKVTDADEYDLWAEQ
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: IGREIEVLVDEVDEQGAVGRCFFDAPEIDGNVFIDNGSNLKPGDKVWCKVTDADEYDLWAEQ
type: DOMAIN
name: TRAM_dom
description: TRAM domain
Protein sequence:
MQFRPSIALVLSIVGILSLEISWTDGCTCFMETRREKCQRSTFGFIGYPYFAGRTNIGGMEYNRFCFFIVRIHKGLSVVFGEPCVYSSVSSAACGTGFYSGSLSIVNGYIESGVKQVNLCGWNERWRSVPSFVKFMFLTQPNWCYA

Annotated regions:
Protein sequence:
MEKILTVQELNEALKTLIENKQEFKDIYVQGELSNLTFNKSGHIYFSIKEQDAAINCMMWKTNAYKIQSLNLEDGMQIICYGRLTYYIPTGRVSFEVRDIQIHGIGDLQKIFEQRYKELEQKGWFDPNLKKSIPEFVKNVGIITADSGAAIYDLIRTVHRRLPLINIYLFPAQVQGDKAEIDITNKIKQANNFKIDLDVLIVGRGGGSYEDLWAFNELEVLQAIKNSHIPIISAVGHEPDWVLSDYVADIRAATPTAAGELVSKSIIEIKNQLKHYYQNYKTLILNKLDFFNEKINNYKKDQTKYIKDNFSFKYLQLKQLSIDNTKWTKNKIDSVIYKLEDYKHSINNSIIHIINSQNKALKNYLIADEQKILNYLKKQISEFNYTISSFKGHINQILKYEELSFDTLENKLNSLDPLKPLQNGYSIVTNLNHQKIRSYKQVKLNEDLKVILTDSKLTVTIKEVKTNEQ

Annotated regions:
phrase: WFDPNLKKSIPEFVKNVGIITADSGAAIYDLIRTVHRRLPLINIYLFPAQVQGDKAEIDITNKIKQANNFKIDLDVLIVGRGGGSYEDLWAFNELEVLQAIKNSHIPIISAVGHEPDWVLSDYVADIRAATPTAAGELVSKSIIEIKNQLKHYYQNYKTLILNKLDFFNEKINNYKKDQTKYIKDNFSFKYLQLKQLSIDNTKWTKNKIDSVIYKLEDYKHSINNSIIHIINSQNKALKNYLIADEQKILNYLKKQISEFNYTISSFKGHINQILKYEELSFDTLENKLNSLDPLKPLQNGYSIVTNLNHQKIRSYKQVKLNEDLKVILTDSKLT
type: DOMAIN
name: Exonuc_VII_lsu_C
description: Exonuclease VII, large subunit, C-terminal

phrase: DIYVQGELSNLTFNKSGHIYFSIKEQDAAINCMMWKTNAYKIQSLNLEDGMQIICYGRLTYYIPTGRVSFEVRDIQIH
type: DOMAIN
name: OB-fold_nuc-bd_dom
description: OB-fold nucleic acid binding domain

phrase: LTVQELNEALKTLIENKQEFKDIYVQGELSNLTFNKSGHIYFSIKEQDAAINCMMWKTNAYKIQSLNLEDGMQIICYGRLTYYIPTGRVSFEVRDI
type: DOMAIN
name: OB-fold_nuc-bd_dom
description: OB-fold nucleic acid binding domain
Protein sequence:
MEESQGYLELYKSGQHDFLYPLIFQEYIYVLAHDHGLNRSILLENLGSDNKFSSLIVKRLITRMYQQNRLIISANDSNQNPFLGHNKDLYSQIISEGFAVIVEIPFPLRLVSSLERKEIVKSHNLRSIHSVFPFLEDKFLHLNYVSDILIPHPIHLEILVQTLRYWVKDASSLHLLRFFLYEYRNWNSLINPKKSIFVFSKRNQRLFLFLYNSHVYEYESVFVFLRNQSSHLRSTSSGALLERIYFYGKIKHLVEVFANDFQAILWLFKDTFVHYVRYQGKSILASKGTPLLMNKWKYYLVNFWQCNFYVWSQPVRIYINQLSNHSLYFLGYISSVGLNPSVVRNQMLENSFIIDNAIKKFDIIVPIIPLIGSLAKAKFCNVLGHPISKPARADSSDSDIIDRFVRICRNLSHYHSGSSKKKSLYRIKYILRLSCARTLARKHKSPVRAFLKRLGSELLEEFLTEEEQVLSLIVPASSTSRRLYRGRIWYLDIICINDLANHE

Annotated regions:
phrase: MEESQGYLELYKSGQHDFLYPLIFQEYIYVLAHDHGLNRSILLENLGSDNKFSSLIVKRLITRMYQQNRLIISANDSNQNPFLGHNKDLYSQIISEGFAVIVEIPFPLRLVSSLERKEIVKSHNLRSIHSVFPFLEDKFLHLNYVSDILIPHPIHLEILVQTLRYWVKDASSLHLLRFFLYEYRNWNSLINPKKSIFVFSKRNQRLFLFLYNSHVYEYESVFVFLRNQSSHLRSTSSGALLERIYFYGKIKHLVEVFANDFQAILWLFKDTFVHYVRYQGKSILASKGTPLLMNKWKYYLVNFWQCNFYVWSQPVRIYINQLSNHSLYFL
type: DOMAIN
name: Maturase_MatK_N
description: Maturase MatK, N-terminal domain

phrase: KKFDIIVPIIPLIGSLAKAKFCNVLGHPISKPARADSSDSDIIDRFVRICRNLSHYHSGSSKKKSLYRIKYILRLSCARTLARKHKSPVRAFLKRLGSELLEEFLTEEEQ
type: DOMAIN
name: Domain_X
description: Domain X
Protein sequence:
MSERKKLLPDSAASETTPPLEENRDIFSPENQNSPDADADSADAHTRAVSDMFGRLTPWYDLQNHAFSLGLDFWWRRHLVRAIVPGPTRRVLDLAAGTLDVSIALCRRHPGLSVVAADICGPMLDFGMERKAKGPLKERISPLVADARCLPLPDASFDAVTMAFGIRNVRPRADALKEMHRVLVPGGRACVLEFAPVETPLFGPFYHWYLRVIMPRLAGLICSYPEAYAYLADTVENFPRPADFSEELREAGFPFVRCTSLTFGVVNLHVAVKGI

Annotated regions:
Protein sequence:
MAFWKPGTEKPRFEEDGEGGIVFMSNNLASSSSSSYGYANIEKQRQRLPVYKYRTEILYLVENHATTIIVGETGSGKTTQIPQYLKEAGWAEGGRVIACTQPRRLAVQAVSARVAEEMGVNLGEEVGYTIRFEDHTTSGVTSVKFLTDGVLIREMMEDPLLTKYSVIMIDEAHERSISTDILLGLLKKIQRRRPELRLIISSATIEAKTMSNFFNSSKKRHAPEGSTPGPKLEPAILSVEGRGFSVKIHYVEEPVSDYIRSVVSTILLINEREPPGDVLVFLTGQEDIETAIKLLEEEAHSNQKNSSGLLPLPLYSGLSRSEQELIFTPTPRGKRKVILSTNIAETSLTLEGVVYVIDSGFSKQKFYNPISDIESLVVAPISKASARQRSGRAGRVRPGKCYRLYTEDYFLNQMPGEGIPEMQRSNLVSTVIQLKALGIDNILGFDWPAPPSSEAMIRALEVLYSLQILDDDAKLTSPTGFQVAELPLDPMISKMILASSELGCSHEIITIAAVLSVQSVWIIARGVQKEQDEAKLRFAAAEGDHVTFLNVYKGFLESKKPTQWCYKNFLNYQSMKKVVEIRDQLKRIARRLGITLKSCDGDMEAVRKAVTAGFFANACRLEPHSNGVYKTIRGSEEVYIHPSSVLFRVNPKWVVYQSIVSTERQYMRNVVTINPSWLTEVAPHFYQNRQNAMSF

Annotated regions:
phrase: QRLPVYKYRTEILYLVENHATTIIVGETGSGKTTQIPQYLKEAGWAEGGRVIACTQPRRLAVQAVSARVAEEMGVNLGEEVGYTIRFEDHTTSGVTSVKFLTDGVLIREMMEDPLLTKYSVIMIDEAHERSISTDILLGLLKKIQRRRPELRLIISSATIEAKTMSNFFNSSKKRHAPEGSTPGPKLE
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: SVIMIDEAH
type: CONSERVED_SITE
name: DNA/RNA_helicase_DEAH_CS
description: DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site

phrase: EAHSNQKNSSGLLPLPLYSGLSRSEQELIFTPTPRGKRKVILSTNIAETSLTLEGVVYVIDSGFSKQKFYNPISDIESLVVAPISKASARQRSGRAGRV
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: LLINEREPPGDVLVFLTGQEDIETAIKLLEEEAHSNQKNSSGLLPLPLYSGLSRSEQELIFTPTPRGKRKVILSTNIAETSLTLEGVVYVIDSGFSKQKFYNPISDIESLVVAPISKASARQRSGRAGR
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: LYLVENHATTIIVGETGSGKTTQIPQYLKEAGWAEGGRVIACTQPRRLAVQAVSARVAEEMGVNLGEEVGYTIRFEDHTTSGVTSVKFLTDGVLIREMMEDPLLTKYSVIMIDEAHERSISTDILLGLLKKIQRRRPELRLIISSATIEAKTMSNFFNSSKKRHA
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: VRKAVTAGFFANACRLEPHSNGVYKTIRGSEEVYIHPSSVLFRVNPKWVVYQSIVSTERQYMRNVVTINPSWLTEVAP
type: DOMAIN
name: DEAD-box_helicase_OB_fold
description: DEAD-box helicase, OB fold

phrase: SVVSTILLINEREPPGDVLVFLTGQEDIETAIKLLEEEAHSNQKNSSGLLPLPLYSGLSRSEQELIFTPTPRGKRKVILSTNIAETSLTLEGVVYVIDSGFSKQKFYNPISDIESLVVAPISKASARQRSGRAGRVRPGKCYRLYTEDYFLNQMPGEGIPEMQRSNLVSTVIQLKAL
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: TTIIVGETGSGKTTQIPQYLKEAGWAEGGRVIACTQPRRLAVQAVSARVAEEMGVNLGEEVGYTIRFEDHTTSGVTSVKFLTDGVLIREMMEDPLLTKYSVIMIDEAHERSISTDILLGLLKKIQ
type: DOMAIN
name: AAA_22
description: ORC1/DEAH AAA+ ATPase domain

phrase: ALEVLYSLQILDDDAKLTSPTGFQVAELP
type: DOMAIN
name: HA2_WH
description: Helicase associated domain (HA2), winged-helix domain

phrase: RALEVLYSLQILDDDAKLTSPTGFQVAELPLDPMISKMILASSELGCSHEIITIAAVLSVQSVWIIARGVQKEQDEAKLRFAAAEGDHVTF
type: DOMAIN
name: Helicase-assoc_dom
description: Helicase-associated domain
Protein sequence:
MAPSSLFLSVGSLIASSLVSATALEARQSQTYQLAESWQGESFINDWNFFDRADPTNGYVTYVNQSFAEQSGLVKVTQSGSFYMGVDYESTLNPNGPGRESVRIETKNYYTEGLYVIDIEHMPGSICGTWPAFWSVGKDWPNDGEIDIIEGVNLQKANKIVLHTSGSCDVSGSNDMTGTLSSSECGEASGTVGCVVKGTNGSSGDPFNEAGGGVYAMEWTDTFIKIWFFPRSQIPASLSSGNPDTSSFGTPMAHLQGSCDFAERFKAQKFIIDTTFCGDWAGNVFAESTCPMSDPSSPMQSCVNYVAQNPAAFKEAYWEINSIKVYQYGVSAASSAAVSQATASKVEGTLVSVQAANTATPTVPVPAETTAVPQPAQTNTVATSAADYATQSSAETTTVPAATGAPSVSAAEGGDSELESTSTVYVTSTTTICPVAESSSAAAAGGKKDAPFNGVSGAEVAATSVAAAPAAATSEHPGADAIANSAAATSTVAKSEGVASQLTAGALSEIPTAPPEPVSQAVSTGSFDDSDTAQGDSEEHGSIASASAAPSTIPVPASSSAAALGGSSIASSFASSRLVPRPTGSSTAASVTAIATWSPTAGERASGTAKGSATLTAPSEVVFTPGLSNGANRMSVGLSGLIGVMFIAALA

Annotated regions:
phrase: ESWQGESFINDWNFFDRADPTNGYVTYVNQSFAEQSGLVKVTQSGSFYMGVDYESTLNPNGPGRESVRIETKNYYTEGLYVIDIEHMPGSICGTWPAFWSVGKDWPNDGEIDIIEGVNLQKANKIVLHTSGSCDVSGSNDMTGTLSSSECGEASGTVGCVVKGTNGSSGDPFNEAGGGVYAMEWTDTFIKIWFFPRSQIPASLSSGNPDTSSFGTPMAHLQGSCDFAERFKAQKFIIDTTFCGDWAGNVFAES
type: DOMAIN
name: GH16
description: Glycoside hydrolase family 16
Protein sequence:
MLVRNICKFTQVMGRFRVVVNPRDYCHLAPLKRSRYHQRSEFGCRPLCSNAAGYEVSWAAPPASGSSGGMFWAFSAAFTLNLFGGADEKEETPEEKLIKTIKRSILCIQREQYDKAEQMLHLALRMAQDIQSKDGITYVFDLMANLAMEREQFKKAEKIFTDVMKRLFAEGHTEESPKILHISSKIAHMSQLQGDLEKSFQGFTWTLQQLAKLLEKMPDDKDILELYGLTKNWFGQLLMKQGKYLEAKNLFKEAFDTLINVYGAVNDASVTILNNISVAYVNLEKYAEARETLLEAMELTKELKDATQEGILQANLGLVYLREGLMSQAENACRLAWKLGKQHQNPDAVEQAEYCLNEIKTTLNGEKRQ

Annotated regions:
Protein sequence:
MRVMGIRRNCQHLWRWGMMLLGMLMICKATEDLWVTVYYGVPVWKEATTTLFCASDAKGYEKEAHNVWATHACVPTDPNPQEIGLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLHCTNWNATGANVTRSNGGNATNTTGWMDGGEIKNCSFNITTNLRDKVEKKYALFYTLDVTQIGDTQMDNTSSTNYSIYRLTSCNTSIITQACPKTSFEPIPIHYCAPAGFAILKCRDKNFNGTGTCKNVSTVQCTHGIKPVVSTQLLLNGSLAEEEVVIRSENFSNNAKVIIVQLNASVEINCTRPSNNTRTSINIGPGRAWYTTGQITGDIRLAYCNISGKNWSNTLKQIVEKLGEQFRNKTIIKFNHSSGGDPEIVLHSFNCGGEFFYCNTTKLFNSTWNKTDSVNSTWNFIEGLNNTGENDIITLPCRIKQIINMWQEVGKAMYAPPIKGIISCRSNITGLILTRDGGSNNTNETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRAKRRVVQREKRAVGLGALFLGFLGAAGSTMGAASVTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTTVPWNASWSNKSMNEIWDNMTWMQWEREIDNYTDLIYLLLEKSQNQQEKNEQELLELDKWANLWNWFDISNWLWYIKLFIMIVGGLIGLRIVFTVLSIVNRVRQGYSPLPFQTRLPAPRGPDRPEGTEGEGGERDRDGSGQLA

Annotated regions:
phrase: VQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTTVPWNASWSNKSMNEIWDNMTWMQWEREIDNYTDLIYLLLEKSQNQQEKNEQELLELD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKEATTTLFCASDAKGYEKEAHNVWATHACVPTDPNPQEIGLENVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLHCTNWNATGANVTRSNGGNATNTTGWMDGGEIKNCSFNITTNLRDKVEKKYALFYTLDVTQIGDTQMDNTSSTNYSIYRLTSCNTSIITQACPKTSFEPIPIHYCAPAGFAILKCRDKNFNGTGTCKNVSTVQCTHGIKPVVSTQLLLNGSLAEEEVVIRSENFSNNAKVIIVQLNASVEINCTRPSNNTRTSINIGPGRAWYTTGQITGDIRLAYCNISGKNWSNTLKQIVEKLGEQFRNKTIIKFNHSSGGDPEIVLHSFNCGGEFFYCNTTKLFNSTWNKTDSVNSTWNFIEGLNNTGENDIITLPCRIKQIINMWQEVGKAMYAPPIKGIISCRSNITGLILTRDGGSNNTNETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRAKRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: MGAASVTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTTVPWNASWSNKSMNEIWDNMTWMQWEREIDNYTDLIYLLLEKSQNQQEKNEQELLELDKWANLWNWFDISNWLWYIKLFIMIVGGLIGLRIVFTVLSIVNRVRQGYSPLPF
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MMQPKKTKFRKAHKGRIHGVASSGATLSFGQFGLKAMAPERITARQIEAARRALTRHMKRVGRVWIRVFPDVPVSKKPAEVRMGSGKGSPELWVVRVKPGRILFEIDGVNDQIAREALTLAAAKLPIKTRFVARIAE

Annotated regions:
phrase: KRVGRVWIRVF
type: CONSERVED_SITE
name: Ribosomal_uL16_CS
description: Large ribosomal subunit protein uL16, conserved site

phrase: RMGSGKGSPEL
type: CONSERVED_SITE
name: Ribosomal_uL16_CS
description: Large ribosomal subunit protein uL16, conserved site

phrase: GATLSFGQFGLKAMAPERITARQIEAARRALTRHMKRVGRVWIRVFPDVPVSKKPAEVRMGSGKGSPELWVVRVKPGRILFEIDGVNDQIAREALTLAAAKLPIKTRF
type: DOMAIN
name: Ribosomal_uL16_dom
description: Large ribosomal subunit protein uL16 domain
Protein sequence:
MYNPVDAVLTKIITNYGIDSFTLRYAICLLGSFPLNAILKRIPEKRIGLKCCFIISMSMFYLFGVLNLVSGFRTLFISTMFTYLISRFYRSKFMPHLNFMFVMGHLAINHIHAQFLNEQTQTTVDITSSQMVLAMKLTSFAWSYYDGSCTSESDFKDLTEHQKSRAVRGHPPLLKFLAYAFFYSTLLTGPSFDYADFDSWLNCEMFRDLPESKKPMRRHHPGERRQIPKNGKLALWKVVQGLAWMILSTLGMKHFPVKYVLDKDGFPTRSFIFRIHYLFLLGFIHRFKYYAAWTISEGSCILCGLGYNGYDSKTQKIRWDRVRNIDIWTVETAQNTREMLEAWNMNTNKWLKYSVYLRVTKKGKKPGFRSTLFTFLTSAFWHGTRPGYYLTFATGALYQTCGKIYRRNFRPIFLREDGVTPLPSKKIYDLVGIYAIKLAFGYMVQPFIILDLKPSLMVWGSVYFYVHIIVAFSFFLFRGPYAKQVTEFFKSKQPKEIFIRKQKKLEKDISASSPNLGGILKAKIEHEKGKTAEEEEMNLGIPPIELEKWDNAKEDWEDFCKDYKEWRNKNGLEIEEENLSKAFERFKQEFSNAASGSGERVRKMSFSGYSPKPISKKEE

Annotated regions:
Protein sequence:
MDDKKKLKDLLSGVEVVSTGNNLAVEVSGIATDSKSVRDGYLFVAIKGYSRDGHDFINEAVLKGAKAIVAQDGCLPAGDISGAPVILVSDSRKASADISNNFYNRPSDKARVIGITGTNGKTTVSYLCESIFKKAGFKTGVVGTINYRYGQRLIPAVNTTPGALELAQIMGYMVDNGAKYIVMEVSSHSLSQGRVRGVDFKTAVFTNITPEHLDYHKTMQEYKNAKAILFKNLAVHAKAVLNIDDVFGKELSAELCCNKSALLTYSLGSNADIYPEKYFLSSSGVEAVIVTPAGKININSRLVGKFNLYNILAAASVGIAESVAIDKIAAGIDDIMVVPGRLEKISCGQKFDVYVDYAHTDDALKNVLGALRELSPAKIITLFGCGGDRDKTKRPRMGKIAASLSDYVIITTDNPRSEDPESIAGQVLEGVLKNDRNKALVIIDRQEAIKKAISLARSGDVVLLAGKGHETYQVFKNTTQPFDDSQIAKNILNAG

Annotated regions:
phrase: GRLEKISCGQKFDVYVDYAHTDDALKNVLGALRELSPAKIITLFGCGGDRDKTKRPRMGKIAASLSDYVIITTDNPRSEDPESIAGQVLEGVLKNDRNKALVIIDRQEAIKKAISLARSGDVVLLAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: ITGTNGKTTVSYLCESIFKKAGFKTGVVGTINYRYGQRLIPAVNTTPGALELAQIMGYMVDNGAKYIVMEVSSHSLSQGRVRGVDFKTAVFTNITPEHLDYHKTMQEYKNAKAILFKNLAVHAKAVLNIDDVFGKELSAELCCNKSALLTYSLGSNADIYPEKYFLSSSGVEAVIVTPAGKININSRLVGKFNLYNILAAAS
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: EVSGIATDSKSVRDGYLFVAIKGYSRDGHDFINEAVLKGAKAIVAQDGCLPAGDISGAPVILVSDSRKASADISNNF
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain
Protein sequence:
MAKQIQAIRGMNDILPTQSPLWQKVEAVLRSSVSAYGYSEIRTPIVENTDLFKRSIGEVTDIVEKEMYTFADNNGDSLTLRPEGTASTVRAGNENGLLYNQEQRLWYMGPMFRHERPQKGRYRQFNQFGVEVYGIGTADIDAEVLMLSARLWEKLGISDHVSLELNTLGDPAERAVYRDALIAFLEQHKDALDEDSKRRMYSNPLRVLDSKDQNVQAILAGAPELMDFLGEESKTHFSQLRELLDAVGIKYTINPRLVRGLDYYNRTVFEWVTSSLGSQGTVLAGGRYDGLVAQLGGKDTPAVGFAMGLERIVLLLETLELNKDIPSEVDVYVTAMGDSCLVEAIKIAQELRSALPNLKVMSHCGGGNVKKQMKRADKSGASVALLIGEDELAEGMVTVKHLRNDIEQQRVARSALGAFLAELAIK

Annotated regions:
phrase: EVDVYVTAMGDSCLVEAIKIAQELRSALPNLKVMSHCGGGNVKKQMKRADKSGASVALLIGEDELAEGMVTVKHLRNDIEQQRVARSALGAFL
type: DOMAIN
name: HisRS_anticodon
description: Histidyl-anticodon-binding

phrase: GMNDILPTQSPLWQKVEAVLRSSVSAYGYSEIRTPIVENTDLFKRSIGEVTDIVEKEMYTFADNNGDSLTLRPEGTASTVRAGNENGLLYNQEQRLWYMGPMFRHERPQKGRYRQFNQFGVEVYGIGTADIDAEVLMLSARLWEKLGISDHVSLELNTLGDPAERAVYRDALIAFLEQHKDALDEDSKRRMYSNPLRVLDSKDQNVQAILAGAPELMDFLGEESKTHFSQLRELLDAVGIKYTINPRLVRGLDYYNRTVFEWVTSSLGSQGTVLAGGRYDGLVAQLGGKDTPAVGFAMGLER
type: DOMAIN
name: HisRS-like_core
description: Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain

phrase: DVYVTAMGDSCLVEAIKIAQELRSALPNLKVMSHCGGGNVKKQMKRADKSGASVALLIGEDELAEGMVTVKHLRNDIEQQRVARSALGAFLA
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: MAKQIQAIRGMNDILPTQSPLWQKVEAVLRSSVSAYGYSEIRTPIVENTDLFKRSIGEVTDIVEKEMYTFADNNGDSLTLRPEGTASTVRAGNENGLLYNQEQRLWYMGPMFRHERPQKGRYRQFNQFGVEVYGIGTADIDAEVLMLSARLWEKLGISDHVSLELNTLGDPAERAVYRDALIAFLEQHKDALDEDSKRRMYSNPLRVLDSKDQNVQAILAGAPELMDFLGEESKTHFSQLRELLDAVGIKYTINPRLVRGLDYYNRTVFEWVTSSLGSQGTVLAGGRYDGLVAQLGGKDTPAVGFAMGLERIVLLLETLELNKDI
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: LWQKVEAVLRSSVSAYGYSEIRTPIVENTDLFKRSIGEVTDIVEKEMYTFADNNGDSLTLRPEGTASTVRAGNENGLLYNQEQRLWYMGPMFRHERPQKGRYRQFNQFGVEVYGIGTADIDAEVLMLSARLWEKLGISDHVSLELNTLGDPAERAVYRDALIAFLEQHKDALDEDSKRRMYSNPLRVLDSKDQNVQAILAGAPELMDFLGEESKTHFSQLRELLDAVGIKYTINPRLVRGLDYYNRTVFEWVTSSLGSQGTVLAGGRYDGLVAQLGGKDTPAVGFAMGLERIVLLL
type: DOMAIN
name: HisRS-like_core
description: Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain
Protein sequence:
MERTEFEIPGGIPPRRHGGTGRDPDTSVDANIQPDDVEAEVTLRPRSLDEFIGQPKVRDQLSLVLTGAKKRGVVPDHVLLSGPPGLGKTTMAMIIAQELGTSLRMTSGPALERAGDLAAMLSNLMEGDVLFIDEIHRIARPAEEMLYMAMEDFRIDVIVGKGPGATSIPLEIPPFTLVGATTRSGMLTGPLRDRFGFTAQMEFYDVADLTRVVKRTARILEVGIDADAAVEIASRSRGTPRIANRLLRRVRDFAEVHADGHITLGAANAALIVFDVDELGLDRLDRAVLDALVRGHGGGPVGVNTLAVAVGEEPATVEEVCEPYLVRAGMIARTGRGRVATAAAWRHLGLEPPEGTIGDY

Annotated regions:
phrase: VPDHVLLSGPPGLGKTTMAMIIAQELGTSLRMTSGPALERAGDLAAMLSNLMEGDVLFIDEIHRIARPAEEMLYMAMEDFRIDVIVGKGPGATSIPLEIPPFTLVGATTRSGMLTGPLRDRFGFTAQMEFYDV
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LRPRSLDEFIGQPKVRDQLSLVLTGAKKRGVVPDHVLLSGPPGLGKTTMAMIIAQELGTSLRMTSGPALERAGDLAAMLSNLMEGDVLFIDEIHRIARPAEEMLYMAMEDFRIDVIVGKGPGATSIPLEIPPFTLVGATTRSGMLTGPLRDRFGFTAQ
type: DOMAIN
name: RuvB-like_N
description: RuvB-like P-loop domain

phrase: YDVADLTRVVKRTARILEVGIDADAAVEIASRSRGTPRIANRLLRRVRDFAEVHADGHITLGAANAALIVFDV
type: DOMAIN
name: AAA_lid_4
description: RuvB, AAA lid domain

phrase: ELGLDRLDRAVLDALVRGHGGGPVGVNTLAVAVGEEPATVEEVCEPYLVRAGMIARTGRGRVATAAAWRH
type: DOMAIN
name: RuvB_C
description: RuvB C-terminal winged helix domain
Protein sequence:
MDKLLDRFLNYVSFDTQSKSGVRQVPSTDGQLKLARALQQELLELGFEQVVLSKQGCLMATLPANVAWPVPAIGFISHMDTSPDFSGKNVNPQILENYRGGDIALGVGDEVLSPVMFPVLHQLLGHTLITTDGKTLLGADDKAGIAEIMTALVRLKKSQLPHGDIRVAFTPDEEIGKGAQFFDVKAFNAQWAYTVDGGGVGELEYENFNAASVQVKIVGNNVHPGSAKGVMVNALTLASRYHQQVPESQSPEQTDGYQGFYHLHSMKGSVERADLHYIVRDFDRNGFEQRKQTMLDIAEKVGAGLHPDCYIEVTITDTYYNMREQVEQHPHIIALAQQAMRDCDIEPNMKPIRGGTDGAHLSFQGLPCPNLFTGGYNYHGKHEFVTLEGMEKAVSVIMRIAELTALRAKP

Annotated regions:
phrase: IGFISHMDT
type: CONSERVED_SITE
name: ArgE/DapE_CS
description: ArgE/DapE/ACY1/CPG2/YscS, conserved site

phrase: YENFNAASVQVKIVGNNVHPGSAKGVMVNALTLASRYHQQVPESQSPEQTDGYQGFYHLHSMKGSVERADLHYIVRDFDRNGFEQRKQTMLDIAEKVGAGL
type: DOMAIN
name: Peptidase_M20_dimer
description: Peptidase M20, dimerisation domain

phrase: GADDKAGIAEIMTALVRLKKSQLPHGDIRVAFTPDEEI
type: CONSERVED_SITE
name: ArgE/DapE_CS
description: ArgE/DapE/ACY1/CPG2/YscS, conserved site
Protein sequence:
MNPTKRKQICVVGAGSSGLTAIKQCLDQNFDVHCFEQSDNFGGLWRYRDEEDGFACVPKTTIINTSKEISAFSDFPPPSEYANFMDHRKMCNYLELYARHFDLLRHIHYNHIVLNVAPNSDHEETGKWRVKILNNEENKSFVKVFDGVMVCVGHHSFPYFPKFPGQEKFKGKIIHTRSYKSPKDFKDNVAVVIGIGNSGADIAADLSNVCSQVYIATRSGSWIFQRVQRNGLPLDLIFNTRLVVGLMSLLPTRIVNVCMEYYVNTFFDHRLYGLNPKHRIMEQQTTANDYISSSIISGKILVRENINRFTENGVIFEGMGVETKCDVVVFATGYDILFPFIDSTIISVNNNEVNLFKNVFQAALKHAHTLAIIGLCQPSGSFFPIAEMQSRWFALLMKGDIKLPKKEEMLKIIEEDTKAVKRRFYTSKRHTIQIGYIPYMDLLATYIGCKPNLFRIALTDVKLWFQLIYGPMMSYQYRLTGPNQWVGARDALLNYKQRFVAPFKC

Annotated regions:
Protein sequence:
MATIHFTKVHGSQNDFFLVDEEENLITEWSDEQRADFAIKLCDRKHSLGGADGILYVTKSSEVGPIGQMRVVNSDGSIASMCGNGLRTVARYLLEKHALTEAKVETMKAILDVKKATSLGFDIPTYQVEISPVKFAAETLPMHVGVEKLFNQVIPELDTELAFSAVSVPNPHLITFVDQSVLDSDKQEKLASYLNSENPYFPDGVNVSFVKRLSDDAIYVRTFERGVGFTNACGTAMSACSLIKKMLDNDTFETPLNVYNDGGRVQVTAKEDAAGEISLQLIGNATFVSKGSVRYENDIVTELTNEATAEQALYQALVKEVKEFLKTTE

Annotated regions:
phrase: NSDGSIASMCGNGL
type: ACTIVE_SITE
name: DAP_epimerase_AS
description: Diaminopimelate epimerase, active site
Protein sequence:
MLYHETFDVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRDFLENAPNLTLFQQAVDDLIVEQDQVRGVITQMGLKFHAKAVVLTVGTFLGGKIHIGLQSSSGGRAGDPPSIALADRLRELPFRVDRLKTGTPPRIDARSVDFSVLEAQHGDNPTPVFSFMGDRTHHPRQIPCFITHTNEQTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEGLTTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKFIQGLFFAGQINGTTGYEEAAAQGLMAGLNASLFSQEKEGWSPRRDQAYMGVLIDDLSTMGTKEPYRMFTSRAEHRLLLREDNADLRLTEKARELGLVDDARWARFNQKIDNMEQERQRLKSTWMNPASTGIEELNQLLKSPMNREASGEDLLRRPEMTYEQLTSLAAFAPALDDLEAAEQVEIQVKYEGYIKRQQDEIEKSLRHEHTKLPADLDYSDVKGLSNEVVLKLNTAKPETLGIASRISGITPAAISILLVHLKKIGMLKVGEENA

Annotated regions:
phrase: AGQINGTTGYEEAAAQGLMAGLN
type: CONSERVED_SITE
name: MnmG-rel_CS
description: MnmG-related, conserved site

phrase: GPRYCPSIEDKVMR
type: CONSERVED_SITE
name: MnmG-rel_CS
description: MnmG-related, conserved site

phrase: VKYEGYIKRQQDEIEKSLRHEHTKLPADLDYSDVKGLSNEVVLKLNTAKPETLGIASRISGITPAAISILL
type: DOMAIN
name: MnmG_C_subdom
description: tRNA uridine 5-carboxymethylaminomethyl modification enzyme, C-terminal subdomain

phrase: DVIVVGGGHAGTEAALASARTGQKTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDAMGGLMAQAIDHAGIQFRTLNASKGPAVRATRAQADRALYKAYVRDFLENAPNLTLFQQAVDDLIVEQDQVRGVITQMGLKFHAKAVVLTVGTFLGGKIHIGLQSSSGGRAGDPPSIALADRLRELPFRVDRLKTGTPPRIDARSVDFSVLEAQHGDNPTPVFSFMGDRTHHPRQIPCFITHTNEQTHEVIRNNLDRSPMYAGIIEGIGPRYCPSIEDKVMRFADKNSHQIFIEPEGLTTHELYPNGISTSLPFDVQVQIVRSMKGFENAHIVRPGYAIEYDFFDPRDLKQTYETKFIQGLFFAGQINGTTGYEEAAAQGLMAGLNASLFSQEK
type: DOMAIN
name: MnmG_N
description: MnmG, N-terminal domain

phrase: DARWARFNQKIDNMEQERQRLKSTWMNPASTGIEELNQLLKSPMNREASGEDLLRRPEMTYEQLTSLAAFAPALDDLEAAEQVEIQVKYEGYIKRQ
type: DOMAIN
name: GIDA_C_N
description: tRNA uridine 5-carboxymethylaminomethyl modification enzyme, C-terminal, N-terninal subdomain

phrase: KSLRHEHTKLPADLDYSDVKGLSNEVVLKLNTAKPETLGIASRISGITPAAISIL
type: DOMAIN
name: MnmG_C
description: tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG, C-terminal
Protein sequence:
MSNGFQMPSSRYVLPSFIEQSAYGTKETNPYAKLFEERIIFLGTQVDDTSANDIMAQLLVLEGMDPDRDITMYINSPGGSFTALMAIYDTMQYVRPDVQTVCLGQAASAAAVLLAAGAPGKRAALPNARVLIHQPATQGTQGQVSDLEIQAAEIERMRKLMETTLSQHTGKTPEQIRIDTDRDKILTAEGALEYGIIDQVFDYRKLNT

Annotated regions:
phrase: TVCLGQAASAA
type: ACTIVE_SITE
name: ClpP_Ser_AS
description: ClpP, Ser active site

phrase: RAALPNARVLIHQ
type: ACTIVE_SITE
name: ClpP_His_AS
description: ClpP, histidine active site
Protein sequence:
MNIQVLLSDKVSQALIAAGAPADCEAQVRQSAKAQFGDYQANGVMSVAKKLGMPPRQLAEKVVQLLDLGDVASKVEIAGPGFINIFLNSQWVAQQADRVLSAPKLDIAPVKQQTIVIDYSAPNVAKEMHVGHLRSTIIGDAAARTQEFLGHKVIRANHVGDWGTQFGMLIAYLEKMQNENASDMGLSDLEQFYREAKKHYDEDADFAERARAYVVKLQGGDQYCLKMWRKLVDITMAQNQLTYNRLNVTLTEDDVMGESLYNAMLPGIVADLKAKGLAVESEGATVVFLDEYKNKDGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRVLYYIDSRQHQHLMQAWTIVRKAGYIPDSLSLEHHMFGMMLGKDGKPFKTRSGGTVKLSDLLDEAVDRAGKLIAEKNPDMPAEEMQSLANAVGIGAVKYADLSKSRTTDYIFDWDNMLAFEGNTAPYMQYAYTRVASVFKRAGVDESNLTLPLVMTEEREITLATRLLQFEEVITTVAREGTPHVMCSYLYDLAGLFSGFYEHCQILNADSEEARQSRLKLSLLTAKTLKVGLDTLGIETVERM

Annotated regions:
phrase: MQYAYTRVASVFKRAGVDESNLTLPLVMTEEREITLATRLLQFEEVITTVAREGTPHVMCSYLYDLAGLFSGFYEHCQILNADSEEARQSRLKLSLLTAKTLKVGLDTLGIETVER
type: DOMAIN
name: DALR_anticod-bd
description: DALR anticodon binding

phrase: MNIQVLLSDKVSQALIAAGAPADCEAQVRQSAKAQFGDYQANGVMSVAKKLGMPPRQLAEKVVQLLDLGDVASKVEIAGPGFINIF
type: DOMAIN
name: Arg-tRNA-synth_N
description: Arginyl tRNA synthetase N-terminal domain

phrase: TIVIDYSAPNVAKEMHVGHLRSTIIGDAAARTQEFLGHKVIRANHVGDWGTQFGMLIAYLEKMQNENASDMGLSDLEQFYREAKKHYDEDADFAERARAYVVKLQGGDQYCLKMWRKLVDITMAQNQLTYNRLNVTLTEDDVMGESLYNAMLPGIVADLKAKGLAVESEGATVVFLDEYKNKDGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRVLYYIDSRQHQHLMQAWTIVRKAGYIPDSLSLEHHMFGMMLGKDGKPFKTRS
type: DOMAIN
name: ArgRS_core
description: Arginyl-tRNA synthetase, catalytic core domain

phrase: LSDKVSQALIAAGAPADCEAQVRQSAKAQFGDYQANGVMSVAKKLGMPPRQLAEKVVQLLDLGDVASKVEIAGPGFINIF
type: DOMAIN
name: Arg-tRNA-synth_N
description: Arginyl tRNA synthetase N-terminal domain

phrase: MQYAYTRVASVFKRAGVDESNLTLPLVMTEEREITLATRLLQFEEVITTVAREGTPHVMCSYLYDLAGLFSGFYEHCQILNADSEEARQSRLKLSLLTAKTLKVGLDTLGIETVER
type: DOMAIN
name: DALR_anticod-bd
description: DALR anticodon binding

phrase: KLDIAPVKQQTIVIDYSAPNVAKEMHVGHLRSTIIGDAAARTQEFLGHKVIRANHVGDWGTQFGMLIAYLEKMQNENASDMGLSDLEQFYREAKKHYDEDADFAERARAYVVKLQGGDQYCLKMWRKLVDITMAQNQLTYNRLNVTLTEDDVMGESLYNAMLPGIVADLKAKGLAVESEGATVVFLDEYKNKDGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLGADRVLYYIDSRQHQHLMQAWTIVRKAGYIPDSLSLEHHMFGMMLGKDGKPFKTRSGGTVKLSDLLDEAVDRAGKLIAEKNPDMPAEEMQSLANAVGIGAVKYADLSKSRTTDYIFD
type: DOMAIN
name: ArgRS_core
description: Arginyl-tRNA synthetase, catalytic core domain

phrase: PNVAKEMHVGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site