nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSEQSKCPVTGRTAGHPVAGGGMSNRDWWPNQLPLDMLHQHSSLVNPMGEAFRYKEEFKKLDLGAVKKDLYALMTDSQEWWPADYGHYGGLFIRMAWHSAGTYRTSDGRGGGGTGNQRFAPLNSWPDNANLDKARRLLWPIKQKYGKMLSWADLMILAGNCALESMGFRTFGFGGGRVDIWEPEEDIYWGKEVEWLGSNRYSGERDLENPLAAVQMGLIYVNPEGPDGNPDPVAAGRDIRETFARMAMNDEETVALVAGGHTFGKCHGVGDPNLIGPEPEAAPIEEQGLGWKSGYGSGKGDETMTSGLEGAWTPDPIHWDMGYLGMLFKYEWELTKSPAGAWQWKPKDVAEEDLAPAAHDPSKRVPTMMTTADLAMRMDPIYGPISRRYYEHPDQFADAFARAWFKLTHRDMGPKSRYLGAEVPAEDLIWQDPVPAVDHELITEGEIAELKMRILASGLPIPELVSTAWASASTFRGSDKRGGANGARIRLAPQKEWEVNQPEQLQRVLHELEKIRDTFNGEQSGGKRVSLADLIVLGGCAAVEEAARRAGHDVTVPFAPGRTDASQAETDVESFAALEPLADGFRNYAKRKYSVTPEEMLIDRSQLLTLTAPEMTVLVGGLRVLGINFRQSPHGVFTRHPETLTNDFFVNLLDMGTEWKPVSHEHDTFEGRDRKTGEPSWSATRVDLIFGSNARLRAIAEVYGSDDAQEKFVHDFVAAWDKVMNLDRFDLS

Annotated regions:
phrase: ADYGHYGGLFIRMAWHSAGTYRTSDGRGGGGTGNQRFAPLNSWPDNANLDKARRLLWPIKQKYGKMLSWADLMILAGNCALESMGFRTFGFGGGRVDIWEPEEDIYWGKEVEWLGSNRYSGERDLENPLAAVQMGLIYVNPEGPDGNPDPVAAGRDIRETFARMAMNDEETVALVAGGHTFGKCHGVGDPNLIGPEPEAAPIEEQGLGWKSGYGSGKGDETMTSGLEGAWTPDPIHWDMGYLGMLFKYEWELTKSPAGAWQWKPKDVAEEDLAPAAHDPSKRVPTMMTTADLAMRMDPIYGPISRRYY
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: AFARAWFKLTHRDMGPKSRYLGAEVPAEDLIWQDPVPAVDHELITEGEIAELKMRILASGLPIPELVSTAWASASTFRGSDKRGGANGARIRLAPQKEWEVNQPEQLQRVLHELEKIRDTFNGEQSGGKRVSLADLIVLGGCAAVEEAARRAGHDVTVPFAPGRTDASQAETDVESFAALEPLADGFRNYAKRKYSVTPEEMLIDRSQLLTLTAPEMTVLVGGLRVLGINFRQSPHGVFTRHPETLTNDFFVNLLDMGTEWKPVSHEHDTFEGRDRKTGEPSWSATRVDLIFGSNARLRAIAEVYG
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: TVALVAGGHT
type: BINDING_SITE
name: Peroxidases_heam-ligand_BS
description: Peroxidases heam-ligand binding site

phrase: GGLFIRMAWHS
type: ACTIVE_SITE
name: Peroxidases_AS
description: Peroxidase, active site

phrase: LDKARRLLWPIKQKYGKMLSWADLMILAGNCALESMGFRTFGFGGGRVDIWEPEEDIYWGKEVEWLGSNRYSGERDLENPLAAVQMGLIYVNPEGPDGNPDPVAAGRDIRETFARMAMNDEETVALVAGGHTFGKCHGVGDPNLIGPEPEAAPIEEQGLGWKSGYGSGKGDETMTSGLEGAWTPDPIHWDMGYLGMLFKYEWELTKSPAGAWQWKPKDVAEEDLAPAAHDPSKRVPTMMTTADLAMRMDPIYGPISRRYYEHPDQFADAFARAWFKLTHRDMGPKSRYLGAE
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: GGLFIRMAWHSAGT
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: LSWADLMILAGNCALES
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: GFRTFGFGGGRV
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: TVALVAGGHTFGKCH
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: FTRHPETLTNDFFVN
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase
Protein sequence:
MSSKLVNSLRLTFLSFLGIVSTSLDAMPAGNPAFPVIPGINVEQKSACAFDLCNSYDVLSALSGNLKLCFCGDYIFSEEAQVKDVPVVTSVTTSGVGPSPTITSTTKNRNFDLVDCSLSANCVAAAFSLPDRTMSAIPLFDASFEVKIGGLKQYYRLPMNAYRDFTSDPLNSESEVTDGLIEVQSNYGFVWDVSLKKVLWKDGVSFVGVGVDYRHASCPIDYIIANSQANPEVFIADSDGKLSLKEWSVCLGLTTYVNDYILPYVAFSVGNVSREAPDNSFKKLEERFTNLKFKVRKITSSHRGNICIGATNYIADNFFYNVEGRWGSQRAVNISGGFQF

Annotated regions:
Protein sequence:
MATELLCLHRPISLTHKLFRNPLPKVIQATPLTLKLRCSVSTENVSFSETETETRRSANYEPNSWDYDYLLSSDTDESIEVHKDKAKKLEAEVRREINNEKAEFLTLLELIDNVQRLGLGYRFESDIRRALDRFVSSGGFDGVTKTSLHGTALSFRLLRQHGFEVSQEAFSGFKDQNGNFLENLKEDIKAILSLYEASFLALEGENILDEAKVFAISHLKELSEEKIGKELAEQVSHALELPLHRRTQRLEAVWSIEAYRKKEDANQVLLELAILDYNMIQSVYQRDLRETSRWWRRVGLATKLHFARDRLIESFYWAVGVAFEPQYSDCRNSVAKMFSFVTIIDDIYDVYGTLDELELFTDAVERWDVNAINDLPDYMKLCFLALYNTINEIAYDNLKDKGENILPYLTKAWADLCNAFLQEAKWLYNKSTPTFDDYFGNAWKSSSGPLQLIFAYFAVVQNIKKEEIENLQKYHDIISRPSHIFRLCNDLASASAEIARGETANSVSCYMRTKGISEELATESVMNLIDETWKKMNKEKLGGSLFAKPFVETAINLARQSHCTYHNGDAHTSPDELTRKRVLSVITEPILPFER

Annotated regions:
phrase: VGLATKLHFARDRLIESFYWAVGVAFEPQYSDCRNSVAKMFSFVTIIDDIYDVYGTLDELELFTDAVERWDVNAINDLPDYMKLCFLALYNTINEIAYDNLKDKGENILPYLTKAWADLCNAFLQEAKWLYNKSTPTFDDYFGNAWKSSSGPLQLIFAYFAVVQNIKKEEIENLQKYHDIISRPSHIFRLCNDLASASAEIARGETANSVSCYMRTKGISEELATESVMNLIDETWK
type: DOMAIN
name: Terpene_synthase_metal-bd
description: Terpene synthase, metal-binding domain

phrase: WDYDYLLSSDTDESIEVHKDKAKKLEAEVRREINNEKAEFLTLLELIDNVQRLGLGYRFESDIRRALDRFVSSGGFDGVTKTSLHGTALSFRLLRQHGFEVSQEAFSGFKDQNGNFLENLKEDIKAILSLYEASFLALEGENILDEAKVFAISHLKELSEEKIGKELAEQVSHA
type: DOMAIN
name: Terpene_synth_N
description: Terpene synthase, N-terminal domain
Protein sequence:
MLLDLSEEHKEHLAFLPQVDTAVVAEFGRIAVEFLRRGSNPKIYEGAARKLNVSSDTIQHGVEGLTYLLTESSKLMISELDFQDSVFVLGFSEELNKLLLQLYLDNRKEIRTILNELAPRLPSYHSLEWRLDVQLASRSLRQQIKPAVTIKLHLDQNGDHSTHFLQTDPATLLHLVQQLEQALEEMKTNHCRRVVRSIK

Annotated regions:
phrase: SYHSLEWRLDVQLASRSLRQQIKPAVTIKLHLDQNGDHSTHFLQTDPATLLHLVQQLEQALEEMKTN
type: DOMAIN
name: COMM
description: COMM domain

phrase: RLPSYHSLEWRLDVQLASRSLRQQIKPAVTIKLHLDQNGDHSTHFLQTDPATLLHLVQQLEQ
type: DOMAIN
name: COMM
description: COMM domain
Protein sequence:
MYTKDTIVAIATPQGNGGIGIIRISGIDALEIAEKLTKKQLKPRYATFCNVYNDNEIIDHGIVIFFKAPLSYTGEDVVEIQAHGNPFILNLIIKAALNCGARIAKAGEFTERAFLNNKLDLAQAEAVADIINASSEIAAKSAAKSLQGDFSKEINNLLEKLIYLRMYVEASIDFPEEEINFLEDQKIHSSLEEIYKVILAIKNSCKQGVILAEGITLILVGKPNAGKSSLLNALAGKESAIVTSIAGTTRDIVKEHIQINGVPMHIIDTAGLRNSDDIIESEGIKRAIKKIQEADQVLFVTDDYTNSQVKFSDIKEIIPEFYDQIPKDIDITYVHNKIDLLKEVPHNHANHIYISAENNIGIDKLKEHILNKVGYTNQNESIYTARERHVTAINNAFEHIKLAKEQLELGNGELLAEELLIVQEYLNSITGEFSSDDLLGEIFSSFCIGK

Annotated regions:
phrase: ITLILVGKPNAGKSSLLNALAGKESAIVTSIAGTTRDIVKEHIQINGVPMHIIDTAGLRNSDDIIESEGIKRAIKKIQEADQVLFVTDDYTNSQVKFSDIKEIIPEFYDQIPKDIDITYVHNKIDLLK
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: LAQAEAVADIINASSEIAAKSAAKSLQGDFSKEINNLLEKLIYLRMYVEASIDFPEEEINFLEDQKIHSSLEEIYKVILAIKNSCKQGVILAEGITLILVGKPNAGKSSLLNALAGKESAIVTSIAGTTRDIVKEHIQINGVPMHIIDTAGLRNSDDIIESEGIKRAIKKIQEADQVLFVTDDYTNSQVKFSDIKEIIPEFYDQIPKDIDITYVHNKIDLLKEVPHNHANHIYISAENNIGIDKLKEHILNKVGYTNQNESIYTARERHVTAINNAFEHIKLAKEQLELGNGELLAEELLIVQEYLNSITGEFSSDDLLGEIFSSF
type: DOMAIN
name: MnmE_helical
description: MnmE, helical domain

phrase: LILVGKPNAGKSSLLNALAG
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: IKRAIKKIQEADQVLFVT
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: DTIVAIATPQGNGGIGIIRISGIDALEIAEKLTKKQLKPRYATFCNVYNDNEIIDHGIVIFFKAPLSYTGEDVVEIQAHGNPFILNLIIKAALNCGARIAKAGEFTERAFLN
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal

phrase: ILVGKPNAGKSSLLNALAGKESAIVTSIAGTTRDIVKEHIQINGVPMHIIDTAGLRNSDDIIESEGIKRAIKKIQEADQVLFVTDDYTNSQVKFSDIKEIIPEFYDQIPKDIDITYVH
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: EGITLILVGKPNAGKSSLLNALAGKESAIVTSIAGTTRDIVKEHIQINGVPMHIIDTAGLRNSDDIIESEGIKRAIKKIQEADQVLFVTDDYTNSQVKFSDIKEIIPEFYDQIPKDIDITYVHNKIDLLKEVPHNHANHIYISAENNIGIDKLKEHILNKV
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain

phrase: GITLILVGKPNAGKSSLLNALAGKESAIVTSIAGTTRDIVKEHIQINGVPMHIIDTAGLRNSDDIIESEGIKRAIKKIQEADQVLFVTDDYTNSQVKFSDIKEIIPEFYDQIPKDIDITYVHNKIDLLKEVPHNHANHIYISAENNIGIDKLKEHILNKV
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain

phrase: TIVAIATPQGNGGIGIIRISGIDALEIAEKLTKKQLKPRYATFCNVYNDNEIIDHGIVIFFKAPLSYTGEDVVEIQAHGNPFILNLIIKAALNCGARIAKAGEFTERAFLNN
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal
Protein sequence:
MSRATAVSRLARAARAAAAARRHHAGGRDPLRALASLAGDASASAGGGARRPAWFAPPMGRLGGGGLLVPPPPPQRRLFHPTQAARYSTSSSSQITPGEFTEMAWEGVVGAVDAARMSKQQVVEAEHLMKALLEQKDGLARRIFSKAGIDNTSVLQATDEFISRQPKVVGDTSGPIIGSSFVSILDNARKHKKEYADEFVSVEHILRAFTEDKRFGQQLFRDLKIGENELKEAISAVRGSQRVTDQNPEGKYQALEKYGIDMTELARRGKLDPVIGRDDEVRRCIQILCRRTKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPEPLQNRKLISLDMGALLAGAKFQGQFEERLKAVLKEITASNGQIILFIDEIHTIVGAGAAGGAMDAGNLLKPMLGRGELRCIGATTLDEYRKYIEKDAALERRFQQVYCGEPAVEDTISILRGLRERYELHHGVKISDGALVSAAVLSDRYITGRFLPDKAIDLVDEAAAKLKMEITSKPIELDEVDREIIRLEMEKLSLKNDTDKASKQRLSKLEADLESLKQKQKNLSEHWEYEKSLMTRIRSIKEETDRVNLEIEAAEREYDLNRAAELKYGTLLSLQKQLEEAENKLMEFQQSGKSMLREEVTDVDIAEIVSKWTGIPVSNLQQSEKEKLLLLEDVLHKRVIGQDIAVKSVANAIRRSRAGLSDPNRPIASLMFMGPTGVGKTELGKTLAEFLFNTENALIRIDMSEYMEKHAVSRLVGAPPGYIGYGEGGQLTEAVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVIIMTSNIGSPLILDTLRNTSDSKEAVYEIMKKQVIDMARQSFRPEFLNRIDEYIVFQPLDTTEINRIVEIQLNRVKNRLRQQKIHLQYTPEAVEHLGSLGFDPNYGARPVKRVIQQMVENEIALSVLKGDFKEDDTVLVDVSSVAIAKGLAPQKKLVLQRLENANLELVAND

Annotated regions:
phrase: VEDTISILRGLRERYELHHGVKISDGALVSAAVLSDRYITGRFLPDKAIDLVDEAAAKLKMEITSKPIELDEVDREIIRLEMEKLSLKNDTDKASKQRLSK
type: DOMAIN
name: ClpA/ClpB_AAA_lid
description: ClpA/ClpB, AAA lid domain

phrase: DAGNLLKPMLGR
type: CONSERVED_SITE
name: ClpA/B_CS1
description: ClpA/B, conserved site 1

phrase: IIGEPGVGKTAIAEGLAQRIVRGDVPEPLQNRKLISLDMGALLAGAKFQGQFEERLKAVLKEITASNGQIILFIDEIHTIVGAGAAGGAMDAGNLLKPMLGRGELRCIGATT
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: RIDMSEYMEKHAVSRLVG
type: CONSERVED_SITE
name: ClpA/B_CS2
description: ClpA/B, conserved site 2

phrase: TKNNPVIIGEPGVGKTAIAEGLAQRIVRGDVPEPLQNRKLISLDMGALLAGAKFQGQFEERLKAVLKEITASNGQIILFIDEIHTIVGAGAAGGAMDAGNLLKPMLGRGELRCIGATTLDEYRKYIEKDAALERRFQQVYCGEPA
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: PIASLMFMGPTGVGKTELGKTLAEFLFNTENALIRIDMSEYMEKHAVSRLVGAPPGYIGYGEGGQLTEAVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVIIMTSNIGSPLILDTLRNTSDSKEAVYEIM
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LDTTEINRIVEIQLNRVKNRLRQQKIHLQYTPEAVEHLGSLGFDPNYGARPVKRVIQQMVENEIALSVLKGDFKEDDTVL
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal

phrase: PGEFTEMAWEGVVGAVDAARMSKQQVVEAEHLMKALLEQKDGLARRIFSKAGIDNTSVLQATDEFISRQPKVVGDTSGPIIGSSFVSILDNARKHKKEYADEFVSVEHILRAFTEDKRFGQQLFRDLKIGENELKEAISAVRG
type: DOMAIN
name: Clp_R_dom
description: Clp, repeat (R) domain

phrase: ARKHKKEYADEFVSVEHILRAFTEDKRFGQQLFRDLKIGENELKEAISAVR
type: DOMAIN
name: Clp_R_dom
description: Clp, repeat (R) domain

phrase: AVDAARMSKQQVVEAEHLMKALLEQKDGLARRIFSKAGIDNTSVLQATDEF
type: DOMAIN
name: Clp_R_dom
description: Clp, repeat (R) domain

phrase: LDTTEINRIVEIQLNRVKNRLRQQKIHLQYTPEAVEHLGSLGFDPNYGARPVKRVIQQMVENEIALSVLKGDFKEDDTVLVDVSSVAIA
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal

phrase: RPIASLMFMGPTGVGKTELGKTLAEFLFNTENALIRIDMSEYMEKHAVSRLVGAPPGYIGYGEGGQLTEAVRRRPYSVVLFDEIEKAHQDVFNILLQLLDDGRITDSQGRTVSFTNCVIIMTSNIGSPLILDTLRNTSDSKEAVYEIMKKQVIDMARQSFRPEFLNRID
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core
Protein sequence:
MSSPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVPAVSTECEAVAPDIPAEGALYATLEDLKNCAGLALGSPTRFGNMASPLKYFLDGTSSLWLTGSLVGKPAAVFTSTASLHGGQETTQLSMLLPLLHHGMLVLGIPYSEPALLETRGGGTPYGASHFAGADGKRSLDEHELTLCRALGKRLAETAGKLGS

Annotated regions:
phrase: SRHGATAEMARQIARGVEQGGFEARVRTVPAVSTECEAVAPDIPAEGALYATLEDLKNCAGLALGSPTRFGNMASPLKYFLDGTSSLWLTGSLVGKPAAVFTSTASLHGGQETTQLSMLLPLLHHGMLVL
type: DOMAIN
name: FMN_Rdtase-like_dom
description: NADPH-dependent FMN reductase-like domain

phrase: VLYYSRHGATAEMARQ
type: CONSERVED_SITE
name: Flavodoxin_CS
description: Flavodoxin, conserved site

phrase: ILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVPAVSTECEAVAPDIPAEGALYATLEDLKNCAGLALGSPTRFGNMASPLKYFLDGTSSLWLTGSLVGKPAAVFTSTASLHGGQETTQLSMLLPLLHHGMLVLGIPYSEPALLETRGGGTPYGASHFAGADGKRSLDEHELTLCRALGKRL
type: DOMAIN
name: Flavodoxin/NO_synth
description: Flavodoxin/nitric oxide synthase
Protein sequence:
MTNQTQLSSKTYDTHFAKLTAEQLAENAKKKVIIGMSGGVDSSVSAFILQQQGYQVEGLFMKNWEEDDDTDYCTAAADLADAQAVADKLGMKLHKINFAAEYWDNVFEHFLNEYKAGRTPNPDILCNKEIKFKAFLEYAAEDLGADYIATGHYVRRSGDDNNAQLLRGLDANKDQSYFLYTLSHKQVGQSLFPVGDIEKPIVRQIAEDLGLATAKKKDSTGICFIGERKFKDFLARYLPAQPGEIRTVDGKVVGRHDGLMYHTLGQRKGLGIGGVKGLSEDPFYVVEKDLINNVLVVAQGHDNSALLSSGLIATQLHWVDRQPIRENLRCTVKTRYRQTDIACEIQPIDDDTIRVIFDEPQIAVTPGQSAVFYQGDVCLGGGVIEEQLK

Annotated regions:
phrase: SGLIATQLHWVDRQPIRENLRCTVKTRYRQTDIACEIQPIDDDTIRVIFDEPQIAVTPGQSAVFYQGDVCLGGGV
type: DOMAIN
name: MnmA-like_C
description: tRNA-specific 2-thiouridylase MnmA-like, C-terminal domain

phrase: KDFLARYLPAQPGEIRTVDGKVVGRHDGLMYHTLGQRKGLGIGGVKGLSEDPFYVVEKDLINNVLVVA
type: DOMAIN
name: MnmA-like_central
description: tRNA-specific 2-thiouridylase MnmA-like, central domain
Protein sequence:
MWITQEITPYLRKEYTIEAKLLDVRSEHNILEIFKSKDFGEIAMLNRQLLFKNFLHIESELLAHMGGCTKKELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLILCLQEPDIHKMDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGEFFSVAMPFVAPLRILSNKGYIYASFKTHPLKDLMAPKIEALKSVRYYNEDIHRAAFALPKNLQEVFKDNIKS

Annotated regions:
phrase: MWITQEITPYLRKEYTIEAKLLDVRSEHNILEIFKSKDFGEIAMLNRQ
type: DOMAIN
name: Spermidine_synt_N
description: Spermidine synthase, tetramerisation domain

phrase: MWITQEITPYLRKEYTIEAKLLDVRSEHNILEIFKSKDFGEIAMLNRQLLFKNFLHIESELLAHMGGCTKKELKEVLIVDGFDLELAHQLFKYDTHIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLILCLQEPDIHKMDGLKRMLKEDGVFISVAKHPLLEHVSMQNALKNMGEFFSVAMPFVAPLRILSNKGYIYASFKTHPLKDLMAPKIEALKSVRYYNEDIHRAAFAL
type: DOMAIN
name: PABS
description: Polyamine biosynthesis domain
Protein sequence:
MIGLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKANRVTKPEAGHFVKAGVEAGRGLWEFRTEGEEFTLGQEINVDIFADVKKVDVTGTSKGKGFQGGVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVRVDAERKLLLVKGSVPGAINGNVIVKPAVKA

Annotated regions:
phrase: FADVKKVDVTGTSKGKGFQGGVK
type: CONSERVED_SITE
name: Ribosomal_uL3_CS
description: Large ribosomal subunit protein uL3, conserved site
Protein sequence:
MLLSWLTGLGAGLLSLHFLQKLLFPYFWDDFWYLLKVVRYGIQMEMYKLRGELVTVLDKFLSHTRKQPRKAFIIYEGDVYTYEDVDKRSNRIAHALLNHSSLKRGDVVALLMSNEPDFVHVWFGLAKLGCVVAFLNSNLRFDSLLHCINTCEPTAVVVGGDLLGSIEEILPSLPKHVRVWGMKDSVPEGIDSLQEKLSLASDEPVPPSHHVTSSLKSTCLYIFTSGTTGLPKAAVISQLQVLKGSVGLWAFGCTADDIIYITLPLYHSSGSLLGIGGCVELGATCVLKKKFSASQFWNDCKKYNVTVFQYIGELCRYLCKQPQREGEKDHRVRLAVGNGLSSDVWRQFLDRFGNIKMCELYGATEGNIVFMNHTGKIGSVGRANFFYSLFFSFELIKYDFQKDEPWRNGQGWCSCVRKGEPGLLISRVNKKNPFFGYAGSDTHTKSKLLFDVFRKGDVYFNTGDLMFQDQENFVYFWDRLGDTFRWKGENVATTEVADVLGRLDFIQEANVYGVRVPGYEGKAGMTSVILKPNKSLDLEKMYNQVVTSLPAYACPLFLRIQDKMETTGTFKLKKLQLVEEGFDPLKISDPLYFMDNLKKSYVPLTEEIYNQIMSEEVKL

Annotated regions:
phrase: YIFTSGTTGLP
type: CONSERVED_SITE
name: AMP-binding_CS
description: AMP-binding, conserved site

phrase: EVADVLGRLDFIQEANVYGVRVPGYEGKAGMTSVILKPNKSLDLEKMYNQVVTSLPAYACPLFLRIQDKMETTGTF
type: DOMAIN
name: AMP-bd_C
description: AMP-binding enzyme, C-terminal domain

phrase: HTRKQPRKAFIIYEGDVYTYEDVDKRSNRIAHALLNHSSLKRGDVVALLMSNEPDFVHVWFGLAKLGCVVAFLNSNLRFDSLLHCINTCEPTAVVVGGDLLGSIEEILPSLPKHVRVWGMKDSVPEGIDSLQEKLSLASDEPVPPSHHVTSSLKSTCLYIFTSGTTGLPKAAVISQLQVLKGSVGLWAFGCTADDIIYITLPLYHSSGSLLGIGGCVELGATCVLKKKFSASQFWNDCKKYNVTVFQYIGELCRYLCKQPQREGEKDHRVRLAVGNGLSSDVWRQFLDRFGNIKMCELYGATEGNIVFMNHTGKIGSVGR
type: DOMAIN
name: AMP-dep_synth/lig_dom
description: AMP-dependent synthetase/ligase domain
Protein sequence:
MKHRDSIEDLYRQYYQEILNYLFRRTHHLETAKDLAQDTFVKALNGLASFRGHSSIRTWLYTIAHHTFINWYRRDVKYQFTEISKNEGLTQTTYDQPEQYLSRTVKSETLRQELLKLKDQHQSVLILREFQELSYEEIAEILGWSLSKVNTTLHRARLELKKNMTKSREEERI

Annotated regions:
phrase: TLRQELLKLKDQHQSVLILREFQELSYEEIAEILGWSLSKVNTTLHRARLE
type: DOMAIN
name: RNA_pol_sigma70_r4_t2
description: RNA polymerase sigma factor 70, region 4 type 2

phrase: SIEDLYRQYYQEILNYLFRRTHHLETAKDLAQDTFVKALNGLASFRGHSSIRTWLYTIAHHTFINWYRRDVKYQFTEISKNEGLTQTTYDQPEQYLSRTVKSETLRQELLKLKDQHQSVLILREFQELSYEEIAEILGWSLSKVNTTLHRARLELKKN
type: DOMAIN
name: RNA_pol_sigma-70_dom
description: RNA polymerase sigma-70-like domain

phrase: LYRQYYQEILNYLFRRTHHLETAKDLAQDTFVKALNGLASFRGHSSIRTWLYTIAHHTFINWYRR
type: DOMAIN
name: RNA_pol_sigma70_r2
description: RNA polymerase sigma-70 region 2
Protein sequence:
MSSQLGHESSVSSPLSYKTDSNAFTREYAESLDAQDPLRDFRKEFIIPSKVDLKRKTLAIDDSSKDESDPRCIYLCGNSLGVQPRNARKYIDYYLRTWAIKGVTGHFLPHEDQLLPPFVDVDDAGAKLMAPIVGALESEVAVMGTLTANLHFLMASFYRPTQERYKIILEGKAFPSDHYAIESQIRHHNLRPEDAMVLIEPEDRLKPILRTEQILRVIDEHASSTALVLLSGIQFYTGQYFDIEKITAHAQSKGILVGWDCAHAAGNVDLRLHDWNVDFAAWCNYKYLNSGPGGMAALFVHERHGRVDMDKVGSDEEPFRPRLSGWWGGDKKTRFLMNNNFLPQTGAAGFQLSNPSVLDMNAVVASLELFNRTSMAEIRQKSLNATGYLEHLLLNYPADFSTGKRPFSIITPSNPAERGAQLSLLLEPGLLDSVLETLEEHGVVVDERKPDVIRVAPAPLYNTYTEYPTYRT

Annotated regions:
Protein sequence:
MEELTKRQSQVLDFIKSYMEKNGFAPSIRDIMKHFNFKSPRAAHKHLIILEKKGYIERKNVSRGIKMMPKSGEIFATETLAPVSGKIAAGDAIEAIQTISDYIPIPTNFFPKNYEYFSLRVEGNSMIEAQIKSGDFVLIRKQDYAMDGDIVVALIDGNDATLKRYKRLNEDEVLLIPENKSMKEIKVKADHLKIQGKMVGLIRVL

Annotated regions:
phrase: MEELTKRQSQVLDFIKSYMEKNGFAPSIRDIMKHFNFKSPRAAHKHLIILEKKGYIERK
type: DOMAIN
name: LexA_DNA-bd_dom
description: LexA repressor, DNA-binding domain

phrase: FSLRVEGNSMIEAQIKSGDFVLIRKQDYAMDGDIVVALIDGNDATLKRYKRLNEDEVLLIPENKSMKEIKVKADHLKIQGKM
type: DOMAIN
name: LexA-like
description: LexA-like

phrase: PVSGKIAAGDAIEAIQTISDYIPIPTNFFPKNYEYFSLRVEGNSMIEAQIKSGDFVLIRKQDYAMDGDIVVALIDGNDATLKRYKRLNEDEVLLIPENKSMKEIKVKADHLKIQGKM
type: DOMAIN
name: Peptidase_S24_S26A/B/C
description: Peptidase S24/S26A/S26B/S26C
Protein sequence:
MKEPDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKAQSALHEQKTLPGMNRPIQVKPADSESRGEDRKLFVGMLGKQQTDEDVRRMFETFGNIDECTVLRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRTLPGASSSLVVKFADTEKERGLRRMQQVANQLGMFSPIALQFGAYSAYTQAVSDQLMQQQAALVAAQSAYLNPMATMAAVQMQQMATINPNGIIATPITQINSITSSSGTSTPPTLTATPVSAIPATLGVNGYSAVPTQSTVQPSSEAIYTNGLHPYPAQSPVAQLDPLQQAYAGMQHYTAAYPAAYGLVSPAFTQPPAILTQQPPQQQQQREGPEGCNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPGSAQAAIQSMNGFQIGMKRLKVQLKRPKDANRPY

Annotated regions:
phrase: CNIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPGSAQAAIQSMNGFQIGMKRLKVQLKR
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: IKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKAQSALHEQKTLPGMNRPIQVKPAD
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: LFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKAQSALHEQKT
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: IFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPGSAQAAIQSMNGFQIGMKRL
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: LFVGMLGKQQTDEDVRRMFETFGNIDECTVLRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRTL
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: RKLFVGMLGKQQTDEDVRRMFETFGNIDECTVLRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRTLPGASSSLVVKFAD
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: NIFIYHLPQEFTDSEILQMFLPFGNVISAKVFVDRATNQSKCFGFVSFDNPGSAQAAIQSMNGFQIGMKRLKV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: KLFVGMLGKQQTDEDVRRMFETFGNIDECTVLRGPDGTSKGCAFVKFQTHTEAQAAINALHGSRTLPGASSSLVV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: KLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKAQSALHEQKTLPGMNRPIQV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: KEPDAIKLFIGQIPRNLDEKDLKPIFEQFGKIYELTVIKDKFTGMHKGCAFLTYCARESALKAQSALHEQKTLPGMNRPIQVKPAD
type: DOMAIN
name: CELF3/4/5/6_RRM1
description: CELF-3/4/5/6, RNA recognition motif 1
Protein sequence:
MDTFRKWLNKPKADDKSLLARFYHADRSLTAVASELDSFDGRAEPDRCTRLVSRLRQNQDKVLAITNMIMEELLGEDRDPRAFRAKFPEEVLQENLAGQLWFGAECLAAGSSILNRESESKEMRPLAQAVTKSLGHVRVLLRDQCLRNNVPNSKTLHLDFNDSNTEQLYESLKIFDHLFAEFELSYVSAMVQVKSRHEYEMQQWIGVLFSETLQRSLKVGLLDQDMVDAFDPGLMFSIPRLAIVAGLVVYAKGPLNMDMPGDQLSEMFRPFRTILIKIRDLLRNLSKQELYQLEKLLCTNEDINTKVPLGSSSIEAPSPEHNNSSSTTNTSNNNNNNTNNNNSSSGSDCTNNDKTGTTTNTHKPVERLVDHRNNNTTNSQQTSSCSVNAAATTPATSSRTRTPPSILSPSAGSTPTASPAPSPTPSHSIASTSSAATTSTNSPAHWSDYDDDDEDDDDDDVHADVEEDEDESGILDSDEHDLNDDSDSEVDEFFEAQLKAIVAAVDCAPGYLIPDCASGYLISNTNLGNLLQPQQVPLTDNFVASEDDELGNPTAVDQQQQPQQQLEHHQQQLQQQQHTEDEPSTSAAMLAARRTLQRLRLPSSSSDNEPSSNNQQMTIKSPSEQTTTRSSSNRHRHHSHHHHHHHHSHHHHHHQPTAAVAVAAAQDEQHNNNQPHSHSHSSSHHHHHNHQSHSHPHRANRSTRKRCSQEHCETITTTKTTSGGEQQTEDSLDSSTASSLSDDVSLAMRNTTARLKFKSTENLLHRLFVCIAGVADQLQTNFASDLRQILRSVFLMNMSSAQEDIDIPEKTKESELFEFRASENDVIQESAGSNQSIYSAEEVNPELDNVFNTNTGTNGARHSAGATMQRNNTIDLATVQSSNSGNSSSSNSSSSSSAARSHVARSRSLGDHDQASTSSSQQQQRELQLQLQQQQQQQAQMQQQLQRHRNNSVGSNSPSSASSTSSNSEHNSPVSTRSGSRRRLPSNTTTTLSTSIGTAATTPTGATTTGVTTTTTMSPPAWIPDGKAPRCMSCQTPFTVVRRRHHCRNCGGVFCGVCSNASAPLPKYGLTKAVRVCRECFMREVRQSHSHGQSQSQIHSPTQQAGGRPQAASAS

Annotated regions:
phrase: MSPPAWIPDGKAPRCMSCQTPFTVVRRRHHCRNCGGVFCGVCSNASAPLPKYGLTKAVRVCRECFMREV
type: DOMAIN
name: Znf_FYVE
description: FYVE zinc finger

phrase: WIPDGKAPRCMSCQTPFTVVRRRHHCRNCGGVFCGVCSNASAPLPKYGLTKAVRVCRECF
type: DOMAIN
name: Znf_FYVE
description: FYVE zinc finger

phrase: SPPAWIPDGKAPRCMSCQTPFTVVRRRHHCRNCGGVFCGVCSNASAPLPKYGLTKAVRVCRECF
type: DOMAIN
name: FYVE_LST2
description: Lateral signaling target protein 2, FYVE domain

phrase: DGKAPRCMSCQTPFTVVRRRHHCRNCGGVFCGVCSNASAPLPKYGLTKAVRVCRECFMRE
type: DOMAIN
name: Znf_FYVE-rel
description: Zinc finger, FYVE-related
Protein sequence:
MSEKHKWWQQVENIDITHLGPKRKAYELLGRHEEQVLINRRDVMEKKDAWDVQEFITQMYIKQLLRHPAFQLLLAFLLLSNAITIALRTNSYLGQKHYELFSTIDDIVLTILICEVLLGWLNGFWIFWKDGWNILNFAIVFILFMGFFIKQLDMVAITYPLRVLRLVHVCMAVEPLARIIKVILQSMPDLANVMALILFFMLVFSVFGVTLFGAFVPKHFQNMGVALYTLFICITQDGWLDIYTDFQMDEREYAMEVGGAIYFAVFITLGAFIGLNLFVVVVTTNLEQMMKTGEEEGHLNIKFTETEEDEDWTDELPLVHCTEARKDTSTVPKEPLVGGPLSNLTEKTCDNFCLVLEAIQENLMEYKEIREELNMIVEEVSSIRFNQEQQNVILHKYTSKSATFLSEPPEGANKQDLITALVSREKVSDSNINMVNKHKFSH

Annotated regions:
phrase: HPAFQLLLAFLLLSNAITIALRTNSYLGQKHYELFSTIDDIVLTILICEVLLGWLNGFWIFWKDGWNILNFAIVFILFMGFFIKQLDMVAITYPLRVLRLVHVCMAVEPLARIIKVILQSMPDLANVMALILFFMLVFSVFGVTLFGAFVPKHFQNMGVALYTLFICITQDGWLDIYTDFQMDEREYAMEVGGAIYFAVFITLGAFIGLNLFVVVVTTNLEQMM
type: DOMAIN
name: Ion_trans_dom
description: Ion transport domain
Protein sequence:
MFIGDASILKPIQWCATEHPELPADIADWLMELGSMTRRFEQHCQRVHVEPQRECFITRDALGEEAEHLPVSQRYWLREIVLFGDNVPWLLGRTVIPEETLSGPDRALVDLGTLPLGRYLFSGDALTRDYIHVGRQDNLWARRSLLRLSGNPLLLTEVFLPASPLYTHCDSIPK

Annotated regions:
Protein sequence:
MAEKFNLQDRFLNILRTNKIPVKVYLVNGFQTKGIIRSFDNFTMLLENGSQQNLIYKHAVSTIMPESFVKLTKQQNEESENEEK

Annotated regions:
phrase: DRFLNILRTNKIPVKVYLVNGFQTKGIIRSFDNFTMLLENGSQQNLIYKHAVSTIMPESF
type: DOMAIN
name: Sm
description: Sm domain
Protein sequence:
MCTHSMITDTKLRKALGKKRDDIEIISDSHGLNARISQAGKISFFYRYRWAGKAVKLNVGDYPAMSITQARERRQQFRNWLTEGLDPREQVKLDKQTRQEAMSVAEAFNYWIERHCIANGLVKVDYYRQVFEKHIAEPMKNVKVDNTAKMHWINVFDSIESRVMAHYMLSLCKRAFRFCVNRSVIASNPLEGLLPSDVGQKPKKRTRRMDDDDLRKIYQWLKSHMSIESVFLVKFIMLTGCRTAEIRLSERSWFRLDDNEWVVPAGSYKTRVHIRRGLSDAAVNLVRNHLKKINTNHLVTSQRKIDGGIKDSPVHSPVASNYARSIWNGTGMAEWSLHDMRRTIATNLSELGCPPHVIEKLLGHQMVGVMAHYNLHDYIDDQKHWLRVWQSHLEEIIGEPFS

Annotated regions:
phrase: RMDDDDLRKIYQWLKSHMSIESVFLVKFIMLTGCRTAEIRLSERSWFRLDDNEWVVPAGSYKTRVHIRRGLSDAAVNLVRNHLKKINTNHLVTSQRKIDGGIKDSPVHSPVASNYARSIWNGTGMAEWSLHDMRRTIATNLSELGCPPHVIEKLLGHQMVGVMAHYNL
type: DOMAIN
name: Integrase_catalytic
description: Integrase, catalytic domain

phrase: MSVAEAFNYWIERHCIANGLVKVDYYRQVFEKHIAEPMKNVKVDNTAKMHWINVFDSIESRVMAHYMLSLCKRAFRFC
type: DOMAIN
name: CB
description: Core-binding (CB) domain

phrase: ITDTKLRKALGKKRDDIEIISDSHGLNARISQAGKISFFYRYRWAGKAVKLNVGDYPAMSITQARERRQQFRNWLTEGLDPREQV
type: DOMAIN
name: Integrase_DNA_bind_dom
description: Integrase, DNA-binding domain

phrase: KRTRRMDDDDLRKIYQWLKSHMSIESVFLVKFIMLTGCRTAEIRLSERSWFRLDDNEWVVPAGSYKTRVHIRRGLSDAAVNLVRNHLKKINTNHLVTSQRKIDGGIKDSPVHSPVASNYARSIWNGTGMAEWSLHDMRRTIATNLSELGCPPHVIEKLLGHQMVGVMAHYNLHDYIDDQKHWLRVW
type: DOMAIN
name: Integrase_catalytic
description: Integrase, catalytic domain
Protein sequence:
MELKRGKTFIKSSLQVSHEKPPDPAAVAAAREGTGPWSVLPGGQQRPHSEKGPQASPSAQEYDRCPNKGAQLDPKGGPAALCGATFKPVRKCKTHDSMSGAGRATAATGQLVGSASFPGSPGSRRMIDYRHFVPQMPFVPAVAKSIPRKRISLKRPKKCFRNLFHIRRNKTEDLASLAAEGKSLPSPGDPSDPGGRRSKAFLPPGEGPGLDGLCQDLLDSELLADASFGLCRALCEDVASLQSFDSLTGCGEVFADESSVPSLELNEGPESPTQAAQGLESKVPRGPLQGSVEQLASPAQNEASDFTRFWDSVNRSVRQQQRALLGPWLSGPQGTDRDQSRLDTAGLAELPLCPCRDPRSGSKASSIDTGTPKSEQPESVSTSDEGYYDSFSPGLEEDKKEAESPGTPAATFPRDSYSGDALYELFHDPSEGPLGPSPDDDLCVSESLSGPALGTPLSICSFRVGAEENLAPAPGPDLLSQGFLQSSWKGKECLLKLCDTELAITMGIVSWLRRGPTPRAPPTPGQPAAPPGSQGAPRAPTEKLGGREGLASDAGGATVCSAPSRQELWAHPGTTGLLAGESKALGGATQGTGTLSRDASREEETRGHSEGLFSSMESAATSTTDTSGKNKAPVPSTWPCSQKEPGPPGVLGCFRGPWRPGHGGDTLDAEPMLAGCVARVAALKISSNEQPPAAWPPRQDMGSGLFGQRWARGPDMLEQKQSSSSPSMTTIHGLPYSASTQDQRCRDRVQDLSWLRVEPTGLGVQAWASVEDQPLQLSTEAVEQVAHGSQLDSEPRSAPAARWSSQGHHPESLGLTLNSQQEGGVSASAPECRCSLLAREGLLCGQPEVGASGPAMAEPHL

Annotated regions: