nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MALRCWDAARSLGSRIFGRYACSVRALSSLPDEKKKFLHNGPDLQDFVSGDLADKSTWDDYKGNLKRQKGERLRLPPWLKTKIPMGKNYNKLKNTLRNLNLHTVCEEARCPNIGECWGGGEYATATATIMLMGDTCTRGCRFCSVKTARNPPPLDPSEPDNTARAIAEWGLDYVVLTSVDRDDVVDGGAEHIAKTVSCLKERNPKILVECLTPDFRGDLRAVEKVALSGLDVYAHNVETVPELQRKVRDPRANFDQSLRVLKHAKEVQPDVVSKTSIMLGLGETDEQVYATMKALRAADVDCLTLGQYMQPTKRHLKVEEYVTPEKFKYWEEVGNELGFHYTASGPLVRSSYKAGEFFLKNLVAKRKTKVSKV

Annotated regions:
phrase: EYATATATIMLMGDTCTRGCRFCSVKTARNPPPLDPSEPDNTARAIAEWGLDYVVLTSVDRDDVVDGGAEHIAKTVSCLKERNPKILVECLTPDFRGDLRAVEKVALSGLDVYAHNVETVPELQRKVRDPRANFDQSLRVLKHAKEVQPDVVSKTSIMLGLGETDEQVYATMKALRAADVDCLTLGQYMQPTKRHLKVEEYVTPEKFKYWEEVGNELGF
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TATIMLMGDTCTRGCRFCSVKTARNPPPLDPSEPDNTARAIAEWGLDYVVLTSVDRDDVVDGGAEHIAKTVSCLKERNPKILVECLTPDFRGDLRAVEKVALSGLDVYAHNVETVPELQRKVRDPRANFDQSLRVLKHAKEVQPDVVSKTSIMLGLGETDEQVYATMKALRAADVDCLTLGQYMQPTKRHLKVEEYVTPEKFKYWE
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: FGRYACSVRALSSLPDEKKKFLHNGPDLQDFVSGDLADKSTWDDYKGNLKRQKGERLRLPPWLKTKIPMGKNYNKLKNTLRNLNLHTVCEEAR
type: DOMAIN
name: LIAS_N
description: Lipoyl synthase, N-terminal

phrase: MGDTCTRGCRFCSVKTARNPPPLDPSEPDNTARAIAEWGLDYVVLTSVDRDDVVDGGAEHIAKTVSCLKERNPKILVECLTPDFRGDLRAVEKVALSGLDVYAHNVETVPELQRKVRDPRANFDQSLRVLKHAKEVQPDVVSKTSIMLGLGETDEQVYATMK
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MEARRARQKALKVKNLKNVRYMKLISVETSSSSDDSCDSFASDNFANTRLQFNREGCRTRSQCRPSGPLRVAMKFPARNTRRAANTKAAPPKPSESSANDSHSESDSEEEEDGMNFLEKRALNIKQNKAMLAKLMSELESFPGIFSGRHSLPGHRTKDSKSPRRRTFPGVASRRNPERRARPLTRSRSRILGSLGALPTEEEEDEEEEEDKYMLVRRRKSVDGYMNDDDVSRSRRPGSMTLPHIIRPVEDVTEEEIRNICSNSREKIYNRSLGSTCHQCRQKTTDTKTNCRNPDCWGIRGQFCGPCLRNRYGEEVKDALLDPNWHCPPCRGICNCSFCRQRDGRCATGVLVYLAKYHGFGNVHAYLKSLKQEFEMQA

Annotated regions:
phrase: NRSLGSTCHQCRQKTTDTKTNCRNPDCWGIRGQFCGPCLRNRYGEEVKDALLDPNWHCPPCRGICNCSFCRQRDGRCATGVLVYLAKYHGFGNVHAY
type: DOMAIN
name: Znf-4CXXC_R1
description: Zinc-finger domain of monoamine-oxidase A repressor R1
Protein sequence:
MIPQTLEQLLSQAQSIAGLTFGELADELHIPVPPDLKRDKGWVGMLLERALGATAGSKAEQDFSHLGVELKTLPINAEGYPLETTFVSLAPLVQNSGVKWENSHVRHKLSCVLWMPIEGSRHIPLRERHIGAPILWKPTAEQERQLKQDWEELMDLIVLGKLDQITARIGEVMQLRPKGANSRAVTKGIGKNGEIIDTLPLGFYLRKEFTAQILNAFLDVKPL

Annotated regions:
phrase: LSQAQSIAGLTFGELADELHIPVPPDLKRDKGWVGMLLERALGATAGSKAEQDFSHLGVELKTLPINAEGYPLETTFVSLAPLVQNSGVKWENSHVRHKLSCVLWMPIEGSRHIPLRERHIGAPILWKPTAEQERQLKQDWEELMDLIVLGKLDQITARIGEVMQLRPKGANSRAVTKGIGKNGEIIDTLPLGFYLRKEFTAQI
type: DOMAIN
name: DNA_rep_MutH/RE_typeII_Sau3AI
description: DNA mismatch repair MutH/Type II restriction enzyme Sau3AI

phrase: LGATAGSKAEQDFSHLGVELKTLPINAEGYPLETTFVSLAPLVQNSGVKWENSHVRHKLSCVLWMPIEGSRHIPLRERHIGAPILWKPTAEQERQLKQ
type: DOMAIN
name: DNA_rep_MutH/RE_typeII_Sau3AI
description: DNA mismatch repair MutH/Type II restriction enzyme Sau3AI

phrase: LGATAGSKAEQDFSHLGVELKTLPINAEGYPLETTFVSLAPLVQNSGVKWENSHVRHKLSCVLWMPIEGSRHIPLRERHIGAPILWKPTAEQERQLKQ
type: DOMAIN
name: DNA_rep_MutH/RE_typeII_Sau3AI
description: DNA mismatch repair MutH/Type II restriction enzyme Sau3AI
Protein sequence:
MRRQKGMTLVEVLVALSVFALAGIAVLQTTARQASSLSRLEEKTFAGWVAENQQVQLRLEQRWPEASWVRGETQFAGLRWHWRWQGVETGDPQTKALDVEVRRNKDAFAADASLRTYVVKQ

Annotated regions:
phrase: MRRQKGMTLVEVLVALSVFALAGIAV
type: PTM
name: N_methyl_site
description: Prokaryotic N-terminal methylation site

phrase: LEEKTFAGWVAENQQVQLRLEQRWPEASWVRGETQFAGLRWHWRWQGVETGDPQTKALDVEVRRNKDAFAADASLRTY
type: DOMAIN
name: T2SS_GspI_C
description: Type II secretion system protein GspI, C-terminal

phrase: KGMTLVEVLVALSVFALAGI
type: PTM
name: N_methyl_site
description: Prokaryotic N-terminal methylation site

phrase: QKGMTLVEVLVALSVFALAGIA
type: PTM
name: N_methyl_site
description: Prokaryotic N-terminal methylation site
Protein sequence:
MVEINDIIKLYTVHPNLDLIDKNFAEDCEFEAFNIPSFKVKGIEAIHEIFKAIGFYAKDIKISKYNYTHSSHCIVLNTQQEITFNILPFVKFNYRMIINIHKNKENKITKFEEITDLESVIQNIPLANYGYFNIIKPALGYLMVKAGSYNRGFQNNGPNKIQATMERLSDNFVEKKEVNYSEPLIKLSKNFNGVTHQDKIDNMDEELFNSKKIDIKDGSNNAWKKPLNLHQ

Annotated regions:
Protein sequence:
MSTVVVKGNVNGGVQQPRRRRRQSLRRRANRVQPVVMVTAPGQPRRRRRRRGGNRRSRRTGVPRGRGSSETFVFTKDNLMGNSQGSFTFGPSLSDCPAFKDGILKAYHEYKITSILLQFVSEASSTSSGSIAYELDPHCKVSSLQSYVNQFQIPQGGAKTYQARMINGVEWHDSSEDQCRILWKGNGKSSDTAGSFRVTIRVALQNPKYDSGPEPGPSPQPTPTPTPQKHERFIAYVGIPMLTIQARESDDQIILGSLGSQRMKYIEDENQNYTNVSSEYYSQSSMQAVPMYYFNVPKGQWSVDISCEGYQPTSSTSDPNRGRSDGMIAYSNADSDYWNVGEADGVKISKLRNDNTYRQGHPELEINSCHFREGQLLERDATISFHVEAPTDGRFFLVGPAIQKTAKYNYTISYGDWTDRDMELGLITVVLDEHLEGTGSANRVRRPPREGHTYMASPREPEGKPVGNKPRDETPIQTQERQPDQTPSDDVSDAGSVNSGGSTESLQLEFGANSDSTYDATVDGTDWPRIPPPRHPPEPRVSGNSRTVTDFSPKADLLENWDAKHFDPGYSKEDVAAATIIAHGSIQDGRSMLEKREENVKNKTSSWKPPLPKAVSPAIAKLRSIRKSQPLEGGTLKKDATDGVSSIGSGSLTGGTLKRKETIEERLLQTLTTEQRLWYENLKKTNPLAATQWLFEYQPPPQVDRNLAEKPFQGRK

Annotated regions:
Protein sequence:
MRAVVIDGAGSVRVNTQPDPALPGPDGVVVAVTAAGICGSDLHFYEGEYPFTEPVALGHEAVGTIVEAGPQVRTVGVGDLVMVSSVAGCGVCPGCETHDPVMCFSGPMIFGAGVLGGAQADLLAVPAADFQVLKIPEGITTEQALLLTDNLATGWAAAQRADISFGSAVAVIGLGAVGLCALRSAFIHGAATVFAVDRVKGRLQRAATWGATPIPSPAAETILAATRGRGADSVIDAVGTDASMSDALNAVRPGGTVSVVGVHDLQPFPVPALTCLLRSITLRMTMAPVQRTWPELIPLLQSGRLDVDGIFTTTLPLDEAAKGYATARARSGEELRFCLRPDSRDVLGAHETVDLYVHVRRCQSVADLQLEGAADGVDGPSMLN

Annotated regions:
phrase: GAGSVRVNTQPDPALPGPDGVVVAVTAAGICGSDLHFYEGEYPFTEPVALGHEAVGTIVEAGPQVRTVGVGDLVMVSSVAGCGVCPGCETHDPVMCFSGPMIFGAGVLGGAQADLLAVPAADFQVLKIPEGITTEQALLLTDNLATGWAAAQRADISFGSAVAVIGLGAVGLCALRSAFIHGAATVFAVDRVKGRLQRAATWGATPIPSPAAETILAATRGRGADSVIDAVGTDASMSDALNAVRPGGTVSVVGVHDLQPFPVPALTCLLRSITLRMTMAPVQRTWPELIPLLQSGRLDVDGIFTTTLPLDEAAKGYATARARS
type: DOMAIN
name: PKS_ER
description: Polyketide synthase, enoylreductase domain

phrase: GHEAVGTIVEAGPQ
type: CONSERVED_SITE
name: ADH_Zn_CS
description: Alcohol dehydrogenase, zinc-type, conserved site

phrase: GPDGVVVAVTAAGICGSDLHFYEGEYPFTEPVALGHEAVGTIVEAGPQVRTVGVGDLVMVSSVAGCGVCPGCETHDPVMCFSGPMIFGAGVLGGAQADLLAVPAADFQVLKI
type: DOMAIN
name: ADH-like_N
description: Alcohol dehydrogenase-like, N-terminal

phrase: AVGLCALRSAFIHGAATVFAVDRVKGRLQRAATWGATPIPSPAAETILAATRGRGADSVIDAVGTDASMSDALNAVRPGGTVSVVGVHDLQPFPVPALTCLLRSITLRMTMAPVQRTWPELIPLL
type: DOMAIN
name: ADH-like_C
description: Alcohol dehydrogenase-like, C-terminal
Protein sequence:
MLLVLAIKTLVLGLCMLPISAAALGVGILFAGYNIAVSRNPDEAETIFNGTLMGFALVETFVFMSFFFGVIVYFI

Annotated regions:
phrase: SRNPDEAETIFNGTLMGFALV
type: BINDING_SITE
name: ATP_synth_F0_csu_DDCD_BS
description: ATP synthase, F0 complex, subunit C, DCCD-binding site

phrase: LGLCMLPISAAALGVGILFAGYNIAVSRNPDEAETIFNGTLMGFALVETFVFMSFFFGV
type: DOMAIN
name: ATPase_proteolipid_c-like_dom
description: V-ATPase proteolipid subunit C-like domain
Protein sequence:
MPLSYQHFRKLLLLDNEAGPLEEELPRLADEDLNRRVAEDLNLGNLNVSIPWTHKVGNFTGLYSSSVPVFNPHWKTPSFPNIHLHQDIIKKCEQFVGPLTVNEKRRLKLIMPARFYPNFTKYLPLDKGIKPYYPEHLVNHYFHTRHYLHTLWKAGILYKRVSTHSASFCGSPYSWEQELQHGAESFHQQSSGILSRPSVGSSLQSKHQQSRLGLQSQQGHLARRQQGRSWSIRTRVHPTARRPSGVEPSGSGHNANLASKSASCLYQSTVRTAAYPAVSTSENHSSSGHAVELHNLPPNSARSQSERPVSPCWWLQFRNSKPCSDYCLSHIVNLLEDWGPCAEHGEHHIRIPRTPARVTGGVFLVDKNPHNTAESRLVVDFSQFSRGNYRVSWPKFAVPNLQSLTNLLSSNLCWLSLDVSAAFYHLPLHPAAMPHLLVGSSGLSRYVARLSSNSRIINHQHGTLQNLHDSCSRNLYVSLLLLYKTFGWKLHLYSHPIILGFRKIPMGVGLSPFLLAQFTSAICSVVRRAFPHCLAFSYMDDVVLGAKSVQHLESLFTAVTNFLLSLGIHLNPNKTKRWGYSLNFMGYVIGSWGSLPQDHIRHKIKECFRKLPVHRPIDWKVCQRIVGLLGFAAPFTQCGYPALMPLYACIQSKQAFTFSPTYKAFLCKQYLNLYPVARQRPGLCQVFADATPTGWGLVMGHQRMRGTFSAPLPIHTAELLAACFARSRSGANILGTDNSVVLSRKYTSFPWLLGCAANWILRGTSFVYVPSALNPADDPSRGRLGPCRPLLHLPFRPTTGRTSLYADSPSVPSHLPDRVHFASPLHVAWRPP

Annotated regions:
phrase: SYQHFRKLLLLDNEAGPLEEELPRLADEDLNRRVAEDLNLGNLNVSIPWTHKVGNFTGLYSSSVPVFNPHWKTPSFPNIHLHQDIIKKCEQFVGPLTVNEKRRLKLIMPARFYPNFTKYLPLDKGIKPYYPEHLVNHYFHTRHYLHTLWKAGILYKRVSTHSASFCGSPYSWEQELQHGAESFHQQSSGILSRPSVGSSLQSKHQQSRLGLQSQQGHLARRQQGRSWSIRTRVHPTARRPSGVEPSGSGHNANLASKSASCLYQSTVRTAAYPAVSTSENHSSSGHAVELHNLPPNSARSQSERPVSPCWWLQFRNSKPCSDYCLSHIVNLLEDWGP
type: DOMAIN
name: DNApol_viral_N
description: Hepadnaviral P protein, N-terminal

phrase: LLSSNLCWLSLDVSAAFYHLPLHPAAMPHLLVGSSGLSRYVARLSSNSRIINHQHGTLQNLHDSCSRNLYVSLLLLYKTFGWKLHLYSHPIILGFRKIPMGVGLSPFLLAQFTSAICSVVRRAFPHCLAFSYMDDVVLGAKSVQHLESLFTAVTNFLLSLGIHLNPNKTKRWGYSLNFMGYV
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: EHHIRIPRTPARVTGGVFLVDKNPHNTAESRLVVDFSQFSRGNYRVSWPKFAVPNLQSLTNLLSSNLCWLSLDVSAAFYHLPLHPAAMPHLLVGSSGLSRYVARLSSNSRIINHQHGTLQNLHDSCSRNLYVSLLLLYKTFGWKLHLYSHPIILGFRKIPMGVGLSPFLLAQFTSAICSVVRRAFPHCLAFSYMDDVVLGAKSVQHLESLFTAVTNFLLSLGIHLNPNKTKRWGYSLNFMGYV
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: GSWGSLPQDHIRHKIKECFRKLPVHRPIDWKVCQRIVGLLGFAAPFTQCGYPALMPLYACIQSKQAFTFSPTYKAFLCKQYLNLYPVARQRPGLCQVFADATPTGWGLVMGHQRMRGTFSAPLPIHTAELLAACFARSRSGANILGTDNSVVLSRKYTSFPWLLGCAANWILRGTSFVYVPSALNPADDPSRGRLGPCRPLLHLPFRPTTGRTSLYADSPSVPSHLPDRVHF
type: DOMAIN
name: DNApol_viral_C
description: Hepadnaviral P protein, C-terminal
Protein sequence:
MDVGNINHLFFIGALLVAASILMSSLSNRLGVPILVIFLAVGMLAGVDGVGGIVFEDYRLAFVISNLALAVILLDGGMRTRTATFRVALKPAFSLATLGVAITSGLTGLAAAWLFDLPLLQGLLIGAIVGSTDAAVVFNLLNGKGLNERVGSTLEIESGSNDPMAMFLTVALIEMLLAGQSTFGWDFLLSLLQQFGIGTVLGLLGGWLLLQLINRLSVADGLYPLLAVAGGLMIFALSGAIGGSGILAIYVCGLLLGNRPIRNRHGILHMFDGLAWLSQIGMFLVLGLLLTPSELLPIAIPALLLSLWMILFARPLAVFVSLLPFRSFHLRERLFISWIGLRGAVPVILAVFPLMAGLENAQLFFNVAFFIVLVSLLLQGSTLAWAAKKAKVEVPPSPMPVSRTGLQVHTTSQWEMFVYRLSASKWCVGAALRELKMPPGTRIAALFRGKELLHPSGSTRLQVDDILCVIGHDEDLPALGKLFSQAPTRGQDLRFFGDFILEGDARLSDIAALYGLKLGEVDGNQTIGAFMAEQVSGNPVVGDQVEWNGLTWTVAAMETGEVRKVGLKFPEGDKPGPQLMF

Annotated regions:
phrase: FGDFILEGDARLSDIAALYGLKLGEVDGNQTIGAFMAEQVSGNPVVGDQVEWNGLTWTVAAMETGEVRKVGLK
type: DOMAIN
name: Transptr-assoc_dom
description: Transporter-associated domain

phrase: VYRLSASKWCVGAALRELKMPPGTRIAALFRGKELLHPSGSTRLQVDDILCVIGHDEDLPALGKL
type: DOMAIN
name: RCK_C
description: Regulator of K+ conductance, C-terminal

phrase: DLRFFGDFILEGDARLSDIAALYGLKLGEVDGNQTIGAFMAEQVSGNPVVGDQVEWNGLTWTVAAMETGEVRKVGLKFP
type: DOMAIN
name: Transptr-assoc_dom
description: Transporter-associated domain

phrase: RTGLQVHTTSQWEMFVYRLSASKWCVGAALRELKMPPGTRIAALFRGKELLHPSGSTRLQVDDILCVIGHDEDLPALGKLFS
type: DOMAIN
name: RCK_C
description: Regulator of K+ conductance, C-terminal

phrase: SILMSSLSNRLGVPILVIFLAVGMLAGVDGVGGIVFEDYRLAFVISNLALAVILLDGGMRTRTATFRVALKPAFSLATLGVAITSGLTGLAAAWLFDLPLLQGLLIGAIVGSTDAAVVFNLLNGKGLNERVGSTLEIESGSNDPMAMFLTVALIEMLLAGQSTFGWDFLLSLLQQFGIGTVLGLLGGWLLLQLINRLSVADGLYPLLAVAGGLMIFALSGAIGGSGILAIYVCGLLLGNRPIRNRHGILHMFDGLAWLSQIGMFLVLGLLLTPSELLPIAIPALLLSLWMILFARPLAVFVSLLPFRSFHLRERLFISWIGLRGAVPVILAVFPLMAGLENAQLFFNVAFFIVLVSLLLQGSTLAWAA
type: DOMAIN
name: Cation/H_exchanger_TM
description: Cation/H+ exchanger, transmembrane domain
Protein sequence:
MFRPSIKFKQSTLSIIARRLKSSAQHQPLRSSFVPSPIVFVAGLAVAAVGGYYCLDSRSAIHEYVLCPLIRTFTDAESGHKLGIFFMKYGLSPRLLDDGKNDQSDVLGVQVFGHKLKNPIGLAAGLDKDGEAIESLFNCGFSYVEIGSITPEPQPGNPQPRFFRLPKDDAVINRYGFNSSGHFNVLATLKLRFNKLLNKFGTSHSSEQHPFSNAFQQGKLLGINLGKNKFGDEVNDYVKGVERLGPYADVLVINVSSPNTPGLRDLQSEAKLTNLLTTVVKERNVLGKNLLGNKPPVLVKVAPDLTEPEIESIANSAKEAKVDGIIISNTTIQRPVDRLLTTDKQLINQAGGLSGKPLKPLSLKALRTLRKYTKDSDLVLIGCGGISNGKDALEFGKAGATFIELYTAFAYKGPGLVGKIRDELAEELRKEGKTWEQIIGSDDK

Annotated regions:
phrase: LIGCGGISNGKDALEFGKAG
type: CONSERVED_SITE
name: Dihydroorotate_DH_CS
description: Dihydroorotate dehydrogenase, conserved site

phrase: SYVEIGSITPEPQPGNPQP
type: CONSERVED_SITE
name: Dihydroorotate_DH_CS
description: Dihydroorotate dehydrogenase, conserved site

phrase: LGVQVFGHKLKNPIGLAAGLDKDGEAIESLFNCGFSYVEIGSITPEPQPGNPQPRFFRLPKDDAVINRYGFNSSGHFNVLATLKLRFNKLLNKFGTSHSSEQHPFSNAFQQGKLLGINLGKNKFGDEVNDYVKGVERLGPYADVLVINVSSPNTPGLRDLQSEAKLTNLLTTVVKERNVLGKNLLGNKPPVLVKVAPDLTEPEIESIANSAKEAKVDGIIISNTTIQRPVDRLLTTDKQLINQAGGLSGKPLKPLSLKALRTLRKYTKDSDLVLIGCGGISNGKDALEFGKAGATFIELYTAFAYKGPGLVGKIRDELAEE
type: DOMAIN
name: Dihydroorotate_DH_cat
description: Dihydroorotate dehydrogenase, catalytic
Protein sequence:
MRVTGIRRNYQHLWRWGTRLLGMLMICSAAENLWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVVLGNVTENFDMWKNNMVEQMQEDVISLWDQSLKPCVKLTPLCVTLNCTDWKNTNNSSSNSSSNSSINISSTIEVGEIKNCSFNITTSIGTKVTDHAIFYKLDIVPIDNDTTSYRLINCNTSVITQACPKVSFEPIPIHYCTPAGFAILKCNNKTFSGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEGIVIRSSNFTNNAKVIIVHLNESVEINCTRPGNNTRKSIHLGPGRAWYATGDIIGDIRQAHCNISRTKWNNTLRWITEKLRKQFGNKTIIFKQSSGGDPEIVMHTFNCGGEFFYCNTSKLFNSTWNGNSTWNDTTGDDPVTLPCRIKQIVNMWQEVGKAMYAPPIRGHIRCSSNITGLLLTRDGGNNTNETETFRPGGGDMKDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQREKRAVGTIGAMFLGFLGTAGSTMGAASITLTVQARQLLSGIVQQQRNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGLWGCSGKLICTTAVPWNVSWSNKSLSAIWDNMTWMEWEREIDNYTREIYTLIEESQNQQEKNELELLELDKWASLWNWFDITKWLWYIKIFIMIVGGLIGLRIVFAVLSIVNKVRQGYSPLSLQTRFPTQRGPDRPEGIEEEGGERDRDRSDRLVNGLLTLIWEDLRNLCLFSY

Annotated regions:
phrase: VQARQLLSGIVQQQRNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGLWGCSGKLICTTAVPWNVSWSNKSLSAIWDNMTWMEWEREIDNYTREIYTLIEESQNQQEK
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASITLTVQARQLLSGIVQQQRNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGLWGCSGKLICTTAVPWNVSWSNKSLSAIWDNMTWMEWEREIDNYTREIYTLIEESQNQQEKNELELLELDKWASLWNWFDITKWLWYIKIFIMIVGGLIGLRIVFAVLSIVNKVRQGYSPLSL
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVVLGNVTENFDMWKNNMVEQMQEDVISLWDQSLKPCVKLTPLCVTLNCTDWKNTNNSSSNSSSNSSINISSTIEVGEIKNCSFNITTSIGTKVTDHAIFYKLDIVPIDNDTTSYRLINCNTSVITQACPKVSFEPIPIHYCTPAGFAILKCNNKTFSGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEGIVIRSSNFTNNAKVIIVHLNESVEINCTRPGNNTRKSIHLGPGRAWYATGDIIGDIRQAHCNISRTKWNNTLRWITEKLRKQFGNKTIIFKQSSGGDPEIVMHTFNCGGEFFYCNTSKLFNSTWNGNSTWNDTTGDDPVTLPCRIKQIVNMWQEVGKAMYAPPIRGHIRCSSNITGLLLTRDGGNNTNETETFRPGGGDMKDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MFVTAPEIQWIRDDASLAQQCREWRTQPYLALDTEFMRVDTFYPAAGLVQVGDGRREWLIDPLLVRDWGPFAELLEDPRVVKVLHACSEDLEVFLRLTGSLPVPLFDTQLAAAYLGMAHSMGYSKLVKEVLDIDLPKDETRSDWLQRPLTEMQMRYAADDVQHLAQVYLALDARLSEEKRAWLLEDGAELVANLCRESDPREAYREVKLGWRLRPQQLAVLRELCAWREEQARLRNRPRNHVLRERTLWPLARLLPKNKTDLAAIEDMHPRTVRQDGDFLIELIAEAARLPQSEWPEALPEPLPPEVTPLLKSLRAIGQREAETLGMAPELMLRKKILEALLKSGYPHGPYELPDSLRGWRRERMGQALLNALESA

Annotated regions:
phrase: IQWIRDDASLAQQCREWRTQPYLALDTEFMRVDTFYPAAGLVQVGDGRREWLIDPLLVRDWGPFAELLEDPRVVKVLHACSEDLEVFLRLTGSLPVPLFDTQLAAAYLGMAHSMGYSKLVKEVLDIDLPKDETRSDWLQRPLTEMQMRYAADDVQHLAQVYLALDAR
type: DOMAIN
name: 3'-5'_exonuclease_dom
description: 3'-5' exonuclease domain

phrase: RPQQLAVLRELCAWREEQARLRNRPRNHVLRERTLWPLARLLPKNKTDLAAIEDMHPRTVRQDGDFLIELIAEAARLPQS
type: DOMAIN
name: HRDC_dom
description: HRDC domain

phrase: QLAVLRELCAWREEQARLRNRPRNHVLRERTLWPLARLLPKNKTDLAAIEDMHPRTVRQDGDFLIEL
type: DOMAIN
name: HRDC_dom
description: HRDC domain

phrase: IQWIRDDASLAQQCREWRTQPYLALDTEFMRVDTFYPAAGLVQVGDGRREWLIDPLLVRDWGPFAELLEDPRVVKVLHACSEDLEVFLRLTGSLPVPLFDTQLAAAYLGMAHSMGYSKLVKEVLDIDLPKDETRSDWLQRPLTEMQMRYAADDVQHLAQVYLALDARL
type: DOMAIN
name: 3'-5'_exonuclease_dom
description: 3'-5' exonuclease domain

phrase: RPQQLAVLRELCAWREEQARLRNRPRNHVLRERTLWPLARLLPKNKTDLAAIEDMHPRTVRQDGDFLIELIAEAARLPQS
type: DOMAIN
name: HRDC_dom
description: HRDC domain
Protein sequence:
MAEPGEQRKFVLGRCCIFHWRGKASIIIPLITLPILIYGFQTDMAEFKCLWLIVTMALLWITETLPIYVTALFPLVFCPLLGLVNASIVCKQYFTDTIVVFLGGLIVALGIEYSNLHTRIALRVIRIVGGSPRRLFVGLMSVSTFMGLWISNSAGTAMMCPIVKALVNELDTNKIFPVYMTQEEEPVEEGEPPHPSKITVAFYAGIAYASSIGGLGTLIGTGTNLVFRGIYTERFPTSTVEITFANFMFYSIPLMVIVNVTLVIIAFLITHMGLFRPNSKTGKIIAEANTNRKLMEDVLRQRHIDLGPMSCHEIQMAIAFAFMIVLLITRKPGFVPGWSDLINRKVVGSASGLSFIVLLIFALPTQYTFFKYCCGKGPFTAQAIDAILSWEYVLRNIPWGLLFLLGGGFALAVASRETGLNIMISKAMQVLIGLPNIVVQSITFVLANFFSAFNANVVVANIVLPILCEMSLALELHPLILTLPACLGISMVYFLPVSTPPNAIVTQYAHIKTKYFACCGIVPTIIGISVALVNTNTWGLIIFPESKSFPDWAKEIKNQTKI

Annotated regions:
phrase: ISMVYFLPVSTPPNAI
type: CONSERVED_SITE
name: Na/sul_symport_CS
description: Sodium/sulphate symporter, conserved site
Protein sequence:
MPTKTVVENDVEIIMPKLYKVMLLNDDYTTFDFVIEILKTVFHKNEEEAINITLKVDREGSAAVGVYPYEIAQVKIEKTHTLARQAGYPLRAVMEEV

Annotated regions:
phrase: PKLYKVMLLNDDYTTFDFVIEILKTVFHKNEEEAINITLKVDREGSAAVGVYPYEIAQVKIEKTHTLARQAGYPLR
type: DOMAIN
name: ClpS_core
description: Adaptor protein ClpS, core
Protein sequence:
MVQRISLKNKLLPDLVEIQRASFKWFLLEGLTEVLEIFPKISDPTSRLELQLFGNEYKIKFPRYSVRQAKNRDKTYSAQIYVPAKLTRKDIDLPSKNQEKNIKSLDLSSTHLQLSAEKQIKNKKYKKRLVFIGDLPIMTNRGTFIVSGTERVIINQIIRSPGIYYKQEIDKNGKQIYSASLISNRGSWLKFEIDPKGEIWIRIDKTHKVNAYIFLRAIGLNKDEIEKGLSKYAFLISASQIYSVKELAKEIGKNNIEEVTDEEALLIVYSKLRPNEPATVAVAKQMLYSRFFDPKRYDLGEVGRYKINKKLGLNIPKTFRVLSPQDILSSIDYLINIKDKNSGNLDDIDHLGNRRVRSVGELLQNQFRVGLNRLERIIRERMMICDIDSLSLSNLINPKPLIASVREFFGSSQLSQFMDQTNPVAELTHKRRISALGPGGFNKDRAGFAVRDLHPSHYGRICPIETPEGPNAGLIGSLATCARVNVFGFIETPFYPVNQGQVIYHNSPVYLTADEEDDFRVAPGDVKVSKQHYIEGDIIPVRYRQEFITTTPTQVDYIAISPIQVISAATSLIPFLEHDDANRALMGSNMQRQAVPLLYPEKPIIGTGLETKIARDSGMVVISRTSGHVNYVSANKIGIQDNSGRTVHYRLKKYYRSNQDTCINQRPIVWVGEKIVVGQTLADGASTDGGEIALGRNILVAYMPWEGYNYEDAFLISERLVYDDLYTSIHIEKYEVECRQTKLGPEEITREIPNVSDNSLKDLDRNGI

Annotated regions:
phrase: RSPGIYYKQEIDKNGKQIYSASLISNRGSWLKFEIDPKGEIWIRIDKTHKVNAYIFLRAIGLNKDEIEKGLSKYAFLISASQIYSVKELAKEIGKNNIEEVTDEEALLIVYSKLRPNEPATVAVAKQMLYSRFFDPKRYDLGEVGRYKINKKLGLNIPKTFRVLSPQDILSSIDYLINIKDKNSGNLDDIDHLGNRRV
type: DOMAIN
name: RNA_pol_Rpb2_2
description: RNA polymerase Rpb2, domain 2

phrase: QFMDQTNPVAELTHKRRISALGPGGFNKDRAGFAVRDLHPSHYGRICPIETPEGPNAGLIGSLATCAR
type: DOMAIN
name: RNA_pol_Rpb2_3
description: RNA polymerase Rpb2, domain 3

phrase: PVNQGQVIYHNSPVYLTADEEDDFRVAPGDVKVSKQHYIEGDIIPVRYRQEFITTTPTQVDYIAI
type: DOMAIN
name: DNA-dir_RNA_pol_bsu_external_1
description: DNA-directed RNA polymerase, beta subunit, external 1 domain

phrase: RQAKNRDKTYSAQIYVPAKLTRKDIDLPSKNQEKNIKSLDLSSTHLQLSAEKQIKNKKYKKRLVFIGDLPIMTNRGTFIVSGTERVIINQIIRSPGIYYKQEIDKNGKQIYSASLISNRGSWLKFEIDPKGEIWIRIDKTHKVNAYIFLRAIGLNKDEIEKGLSKYAFLISASQIYSVKELAKEIGKNNIEEVTDEEALLIVYSKLRPNEPATVAVAKQMLYSRFFDPKRYDLGEVGRYKINKKLGLNIPKTFRVLSPQDILSSIDYLINIKDKNSGNLDDIDHLGNRRVRSVGELLQNQFRVGLNRLERIIRERMMICDIDSLSLSNLINP
type: DOMAIN
name: RNA_pol_bsu_protrusion
description: RNA polymerase, beta subunit, protrusion

phrase: SRTSGHVNYVSANKIGIQDNSGRTVHYRLKKYYRSNQDTCINQRPIVWVGEKIVVGQTLADGASTDGGEIALGRNILVAYMPWEGYNYEDAFLISERLVYDDLYTSIHIEKYEVECRQTKLGPEEITREIPNVSDNSLKDLDRNG
type: DOMAIN
name: DNA-dir_RNAP_su2_dom
description: DNA-directed RNA polymerase, subunit 2, hybrid-binding domain
Protein sequence:
MSSLLNFYRKVLNVPLSLLVKSRAIPTDPVKELNLNLEQPIIYVLPYTSQTDLLILQKNCLSLNLPDPLQNNELNGQSLPRYVFLDEGRRFFKSKGAKSETESIFYRYLDLHRNNESLDVQLIPASVLWGRSPGKESEPHLRLMSSFQRIISMIWFGRDNFVRFSQALSLKYMVAEHGADEGIAQKLARVAKIHFAKQRYSAMGPRLPDRQAMFNKIIQSPAIKAAIEEEAKTKKISIEKARQEAEKIVNEIAADVSHESLRIADRVLSWLWNKLYQGINVQNGDRVRKLALEGHEIVYVPCHRSHMDYLLLSYLLYHQGLVPPHIAAGINLNFFPAGPIFRSWGAFFIRRTFKGNRLYSTIFREYLAELFYRGYSVEYFIEGGRSRTGRLLEPKTGMMSMTLQALQRGLTRPISIVPVYIGYEHVLEVDTYAKELRGAEKEKENAGLVLRVIKKLKNLGQCYVNFAEPIQVNNYLNQHFPEWKESQAEDSRPKWLNEAVDSVAHQVMININKAAAINAKNLIGSVLLASRQRALAREQLIEQVDSYLQLFKNVSYSDDVIVPNDSAEEMLNHVLTLPRSGVISEKDSFGEMIRLDRESAVLMTYYRNNIQHLFVLPSLVASIILHHESVSKDLIIKTVNRIYPFLKAELFLHFEENDVRNQVEAILTEFSAQRIVKYESDVLQINRARVRALQLHAAGVREILQRYYISLSILLEHPEISRAALEKESRSIAQRLSILHGINAPEFFDKALFSTFSASLKAQGYFDSEGNCILEKAKEAEEILRSLISVEVQLTIQGAMEKVEEVENTETVVKTAEAVTEKNE

Annotated regions:
phrase: IVYVPCHRSHMDYLLLSYLLYHQGLVPPHIAAGINLNFFPAGPIFRSWGAFFIRRTFKGNRLYSTIFREYLAELFYRGYSVEYFIEGGRSRTGRLLEPKTGMMSMTLQALQRGLTRPISIVPVYIGY
type: DOMAIN
name: Plipid/glycerol_acylTrfase
description: Phospholipid/glycerol acyltransferase

phrase: INVQNGDRVRKLALEGHEIVYVPCHRSHMDYLLLSYLLYHQGLVPPHIAAGINLNFFPAGPIFRSWGAFFIRRTFKGNRLYSTIFREYLAELFYRGYSVEYFIEGGRSRTGRLLEPKTGMMSMTLQALQRGLTRPISIVPVY
type: DOMAIN
name: Plipid/glycerol_acylTrfase
description: Phospholipid/glycerol acyltransferase

phrase: YQGINVQNGDRVRKLALEGHEIVYVPCHRSHMDYLLLSYLLYHQGLVPPHIAAGINLNFFPAGPIFRSWGAFFIRRTFKGNRLYSTIFREYLAELFYRGYSVEYFIEGGRSRTGRLLEPKTGMMSMTLQALQRGLTRPISIVPVYIGYEHVLEVDTYAKELRGAEKEKENAGLVLRVIKKLKNLGQCYVNFAEPIQVNNYL
type: DOMAIN
name: GPAT/DHAPAT_LPLAT
description: GPAT/DHAPAT, acyltransferase domain

phrase: YAKELRGAEKEKENAGLVLRVIKKLKNLGQCYVNFAEPIQVNNYLNQHFPEWKESQAEDSRPKWLNEAVDSVAHQVMININKAAAINAKNLIGSVLLASRQRALAREQLIEQVDSYLQLFKNVSYSDDVIVPNDSAEEMLNHVLTLPRSGVISEKDSFGEMIRLDRESAVLMTYYRNNIQHLFVLPSLVASIILHHESVSKDLIIKTVNRIYPFLKAELFLHFEENDVRNQVEAILTEFSAQRIVKYESDVLQINRARVRALQLHAAGVREILQRYYISLSILLEHPEISRAALEKESRSIAQRLSILHGINAPEFFDKALFSTFSASLKAQGYFD
type: DOMAIN
name: GPAT/DHAPAT_C
description: GPAT/DHAPAT, C-terminal domain
Protein sequence:
MAKEKYERTKPHVNIGTIGHVDHGKTTLTAAISKVLHEEFPDVNPEYDFNQIDSAPEEAARGITINIAHIEYQTEKRHYAHVDCPGHADFVKNMITGAAQMDGAILVVAATDGPMAQTREHVLLARQVGVPKILVALNKCDMVDDEELIELVEEEVRDLLDENGFDRDCPVIHTSAYGALHDDAPDHEKWVQSVKDLMDAVDDYIPTPVHDLDKPFLMPIEDVFTISGRGTVVTGRVERGQLAVNTPVEIVGIRPTQQTTVTSIETFHKTMDACEAGDNTGLLLRGLGRDDVERGQVVAKPGSVTPHTKFEGEVYVLTKDEGGRHSPFFSNYRPQFYFRTTDVTGVIELPEGVEMVQPGDHATFTVELIQPIAMEEGLTFAVREGGHTVGSGRVTKILA

Annotated regions:
phrase: KPHVNIGTIGHVDHGKTTLTAAISKVLHEEFPDVNPEYDFNQIDSAPEEAARGITINIAHIEYQTEKRHYAHVDCPGHADFVKNMITGAAQMDGAILVVAATDGPMAQTREHVLLARQVGVPKILVALNKCDMVDDEELIELVEEEVRDLLDENGFDRDCPVIHTSAYGALHDDAPDHEKWVQSVKDLMDAVDDYIPTP
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: DSAPEEAARGITINI
type: CONSERVED_SITE
name: G_TR_CS
description: Tr-type G domain, conserved site

phrase: GTVVTGRVERGQLAVNTPVEIVGIRPTQQTTVTSIETFHKTMDACEAGDNTGLLLRGLGRDDVERGQV
type: DOMAIN
name: EFTu-like_2
description: Translation elongation factor EFTu-like, domain 2

phrase: NIGTIGHVDHGKT
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: ARGITINI
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: AHVDCPGHAD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: TGAAQMDGAIL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: ILVALNKCD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: PHVNIGTIGHVDHGKTTLTAAISKVLHEEFPDVNPEYDFNQIDSAPEEAARGITINIAHIEYQTEKRHYAHVDCPGHADFVKNMITGAAQMDGAILVVAATDGPMAQTREHVLLARQVGVPKILVALNKCDMVDDEELIELVEEEVRDLLDENGFDRDCPVIHTSAYGALHDDAPDHEKWVQSVKDLMDAVDDYIPT
type: DOMAIN
name: EF-Tu_GTP-bd
description: Elongation factor Tu (EF-Tu), GTP-binding domain

phrase: KPHVNIGTIGHVDHGKTTLTAAISKVLHEEFPDVNPEYDFNQIDSAPEEAARGITINIAHIEYQTEKRHYAHVDCPGHADFVKNMITGAAQMDGAILVVAATDGPMAQTREHVLLARQVGVPKILVALNKCDMVDDEELIELVEEEVRDLLDENGFDRDCPVIHTSAYGALHDDAPDHEKWVQSVKDLMDAVDDYIP
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: SVTPHTKFEGEVYVLTKDEGGRHSPFFSNYRPQFYFRTTDVTGVIELPEGVEMVQPGDHATFTVELIQPIAMEEGLTFAVREGGHTVGSGRVTK
type: DOMAIN
name: Transl_elong_EFTu/EF1A_C
description: Translation elongation factor EFTu/EF1A, C-terminal

phrase: FLMPIEDVFTISGRGTVVTGRVERGQLAVNTPVEIVGIRPTQQTTVTSIETFHKTMDACEAGDNTGLLLRGLGRDDVERGQVVAKP
type: DOMAIN
name: EFTU_2
description: Elongation factor Tu, domain 2

phrase: VNIGTIGHVDHGKTTLTAAISKVLHEEFPDVNPEYDFNQIDSAPEEAARGITINIAHIEYQTEKRHYAHVDCPGHADFVKNMITGAAQMDGAILVVAATDGPMAQTREHVLLARQVGVPKILVALNKCDMVDDEELIELVEEEVRDLLDEN
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain
Protein sequence:
MGTDSRAAGALLARASTLHLQTGNLLNWGRLRKKCPSTHSEELRDCIQKTLNEWSSQISPDLIREFPDVLECTVSHAVEKINPDEREEMKVSAKLFIVGSNSSSSTRNAVDMACSVLGVAQLDSVIIASPPVEDGVNLSLEHLQPYWEELQNLVQSKKIVAIGTSDLDKTQLEQLYQWAQVKPNSNQVNLASCCVMPPDLTAFAKQFDIQLLTHNDPKELLSEASFQEALQESIPDIRAHEWVPLWLLRYSVIVKSRGIIKSKGYILQAKRKGS

Annotated regions:
phrase: VSHAVEKINPDEREEMKVSAKLFIVGSNSSSSTRNAVDMACSVLGVAQLDSVIIASPPVEDGVNLSLEHLQPYWEELQNLVQSKKIVAIGTSDLDKTQLEQLYQWAQVKPNSNQVNLASCCVMPPDLTAFAKQFDIQL
type: DOMAIN
name: NADP_OxRdtase_dom
description: NADP-dependent oxidoreductase domain
Protein sequence:
MRKAIIAGNWKMNKTVDEAVKVVEELKPLVKDATCDVVVCPTFVCLDAVKKATAGSNIKVAAQNMHFEESGAFTGEVAPGMLEAMGIEYVVLGHSERREYFNETDEAINKKVKAAFAHNITPIVCCGETLEQRESGVTNNFIACQIKVDIAGLTKEQAEKVVIAYEPIWAIGTGKTATKEQANETILAIRNVVVEMYGKEVADKVRIQYGGSVKPNTITEQMAMSDIDGALVGGASLKAEDFSGIVNY

Annotated regions:
phrase: AYEPIWAIGT
type: ACTIVE_SITE
name: Triosephosphate_isomerase_AS
description: Triosephosphate isomerase, active site
Protein sequence:
MKTLIRPLVVIFAVLTVVTGMAYPAVMTAFGQAVFPAQANGSLIERDGRAVGSALIGQPFDAPRYFWGRLSATAPMPYNAAGSGGSNLGPLNPSLAEQVKARIAALRDAGTDLSKPVPVDLVTASASGLDPDITPAAAAYQIERVAKARKLTADAVARLVAANTTGRQFGVLGEPRVNVLKLNLALDAAQGGH

Annotated regions: