nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSKTHLTTDKFAQMGLEPEVLAGLESKGFHYCTPIQALSLPLLVEGHDLAGQAQTGTGKTLAFLAATFNYLLTHPLTKPRLINQPRAIIMAPTRELAVQIYNDAESMSASTGLKLGLAYGGEGYDKQLAVLEQGVDILIGTTGRIIDYFKSKVIDLSNIQVVVLDEADRMFDLGFIKDIRFLFRRMPPATERLSMLFSATLSLRVQELAYEHMNHPEHVQIEPEQMTGVRIKEELFYPSNEDKMLLLLSLMEEEWPEKAIVFANTKHVCEDVHAWLENDGHRVGLLTGDVPQKKRMKILEDFTKGTVDILVATDVAARGLHIPDVTHVFNYDLPDDAEDYVHRIGRTGRAGKSGHSISLACEDYAFNLPAIEEYIHHPIPVSKYDREALLDDVTAPKRVFRNRQPVNRNMRDRQGGGNSNNRRRPPRKS

Annotated regions:
phrase: GFHYCTPIQALSLPLLVEGHDLAGQAQTGTGKTLAFLAATFNYLLTHPLTKPRLINQPRAIIMAPTRELAVQIYNDAESMSASTGLKLGLAYGGEGYDKQLAVLEQGVDILIGTTGRIIDYFKSKVIDLSNIQVVVLDEADRMFDLGFIKDIRFLFRRMPPATERLSMLFSATLSLRVQELAYEHMNHPEHVQIEPEQMTGVRIKE
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: VLDEADRM
type: CONSERVED_SITE
name: RNA-helicase_DEAD-box_CS
description: ATP-dependent RNA helicase DEAD-box, conserved site

phrase: DKFAQMGLEPEVLAGLESKGFHYCTPIQ
type: DOMAIN
name: RNA_helicase_DEAD_Q_motif
description: RNA helicase, DEAD-box type, Q motif

phrase: KMLLLLSLMEEEWPEKAIVFANTKHVCEDVHAWLENDGHRVGLLTGDVPQKKRMKILEDFTKGTVDILVATDVAARGLHIPDVTHVFNYDLPDDAEDYVHRIGRTGRAGKSGHSISLACEDYAFNLPAIEEYIHHPIPVSKYDREAL
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: EDVHAWLENDGHRVGLLTGDVPQKKRMKILEDFTKGTVDILVATDVAARGLHIPDVTHVFNYDLPDDAEDYVHRIGRTGRA
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: TPIQALSLPLLVEGHDLAGQAQTGTGKTLAFLAATFNYLLTHPLTKPRLINQPRAIIMAPTRELAVQIYNDAESMSASTGLKLGLAYGGEGYDKQLAVLEQGVDILIGTTGRIIDYFKSKVIDLSNIQVVVLDEADRMFDLGFIKDIRFLFRRMPPATERLSMLFSATLSLRV
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: KMLLLLSLMEEEWPEKAIVFANTKHVCEDVHAWLENDGHRVGLLTGDVPQKKRMKILEDFTKGTVDILVATDVAARGLHIPDVTHVFNYDLPDDAEDYVHRIGRTGRA
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: LPLLVEGHDLAGQAQTGTGKTLAFLAATFNYLLTHPLTKPRLINQPRAIIMAPTRELAVQIYNDAESMSASTGLKLGLAYGGEGYDKQLAVLEQGVDILIGTTGRIIDYFKSKVIDLSNIQVVVLDEADRMFDLGFIKDIRFLFRRMPPATERLSMLFSATLSLRVQELAYEHMNHPEH
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain
Protein sequence:
MNVLVLNAGSSSLKFQIIATDLERIQRDSDERLCHGYVERIGGEAIITVEPRGGPRKKVTAPVRNIAAALDYVLRWLASDQSGVAEIRSLSDVHAVGHRVVHGGEVFRESAVITDEVLQGIEDCIDLAPLHNPNNIKGILAARDAFGSGMPQVAVFDTAFHTSLPDHAYLYAMPYHLYARHRIRRYGFHGTSNRYVAYRYRTLRQLTREQTNIITLHLGNGCSATAIRNGRSMDTSMGMTPLEGLVMGTRSGDLDPAILSLIATKEGLSPTEVEALLNTQCGLLGISGVTNDMKVLLQELREHDDRRIRLAIEIFCYRARKYIGALLACMGGADAVIFTGGIGENAPEIRARICAGLEWAGLEIDSDQNAQTMGRPQQISKPESRLQAWVIPTDEELLIARDTVRCILGEPHPA

Annotated regions:
phrase: VLVLNAGSSSL
type: CONSERVED_SITE
name: Aliphatic_acid_kinase_CS
description: Aliphatic acid kinase, short-chain, conserved site

phrase: IITLHLGNGCSATAIRN
type: CONSERVED_SITE
name: Aliphatic_acid_kinase_CS
description: Aliphatic acid kinase, short-chain, conserved site
Protein sequence:
MGLEKSLILLPLLVLVLAWVQPSLGKETPAMKFERQHMDSAGSSSSSPTYCNQMMKRREMTKGSCKRVNTFVHEPLADVQAVCSQKNVTCKNGKKNCYKSRSALTITDCRLKGNSKYPDCDYQTSHQQKHIIVACEGSPYVPVHFDASV

Annotated regions:
phrase: KETPAMKFERQHMDSAGSSSSSPTYCNQMMKRREMTKGSCKRVNTFVHEPLADVQAVCSQKNVTCKNGKKNCYKSRSALTITDCRLKGNSKYPDCDYQTSHQQKHIIVACEGSPYVPVHFDAS
type: DOMAIN
name: RNaseA_domain
description: Ribonuclease A-domain

phrase: PAMKFERQHMDSAGSSSSSPTYCNQMMKRREMTKGSCKRVNTFVHEPLADVQAVCSQKNVTCKNGKKNCYKSRSALTITDCRLKGNSKYPDCDYQTSHQQKHIIVACEGSPYVPVHF
type: DOMAIN
name: RNaseA_domain
description: Ribonuclease A-domain

phrase: CKRVNT
type: ACTIVE_SITE
name: RNaseA_AS
description: Ribonuclease A, active site
Protein sequence:
MKLSWKTFLLWSLPIIVIVFFIWQGFLAPTTNELNSNISSSRMTYGRFLEYLDMGWVKKVDIYDNGHTAIVEAVGPELGNRMQKIRVELPATAPELITKLKKANVDLDAHPTRNTSALWNLIGNLLFPLFLIGGLAFLFRRSSNAPGGPGQAMSFGKSKALFQMEAKTGVVFDDVAGIDEAKEEFEEVVTFLKQPESFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAGEASVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFIDEIDAVGRQRGTGVGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDAALLRPGRFDRQVAVDIPDFKGRLAILNVHARNKKIDPSVSLSIIARRTPGFSGADLANLLNEAAILTARRRKNTISLNEIDASIDRIVAGMEGTPLIDSKSKRLIAYHEIGHAIVGTLLKDHDPVQKVTLIPRGQARGLTWFTPSEDQILISRSQIKSRIMGALGGRAAEEVVFGDAEVTTGASNDLQQVTSMARQMVTRFGMSTIGPLSLENEESNPFLGRGIGSSSEYSDEIAIKIDKQIQLIVKECHEKTTKIIRDNRVVIDRLVDLLIERETINGEEFRQIINEYTPVPEKVT

Annotated regions:
phrase: IIVIAATNRADILDAALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: LLWSLPIIVIVFFIWQGFLAPTTNELNSNISSSRMTYGRFLEYLDMGWVKKVDIYDNGHTAIVEAVGPELGNRMQKIRVELPATAPELITKLKKANVDLDAH
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular

phrase: IPKGVLLIGPPGTGKTLLAKAIAGEASVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFIDEIDAVGRQRGTGVGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDAALLRPGRFDRQVAVDIP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: SVSLSIIARRTPGFSGADLANLLNEAAILTARRRKNTISLNEI
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: VLLIGPPGTGKTLLAKAIAGEASVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFIDEIDAVGRQRGTGVGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDAALLRPGRFDRQVAV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: LIDSKSKRLIAYHEIGHAIVGTLLKDHDPVQKVTLIPRGQARGLTWFTPSEDQILISRSQIKSRIMGALGGRAAEEVVFGDAEVTTGASNDLQQVTSMARQMVTRFGMSTIGPLSLENEESNPFLGRGIGSSSEYSDEIAIKIDKQIQLIVKECHEKTTKIIRDNRVVIDRLVDLLIERETINGEEFRQ
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41
Protein sequence:
MTKHIFVTGGVVSSLGKGLNSASIGMLLESRGLKVRLQKFDPYVNVDPGTMSPYEHGEVYVTEDGAETDLDLGHYERFTNAETNKYCNFTTGSIYYSVIMKERNGEYLGKTVQVIPHITNEVIECIKKLDGPDTDVVISEIGGIVGDIESQLFLEAIRQFGQTIGRGNVLYIHLTLVPYLSAADEIKTKPTQHSVGMLRQAGVQPDIIICRTEKHLSEEIKEKISLFCNVDKNAIIEEKDVKPYLYEIPLILMEQGLDKLIIQKLQLKTNNGNIDKWLSILEILRNPKYTTEIAIVGKYIGHQSAYESIYESLIHGGIENNARVKERRIESEDVERFGAEACLKGVNGILAPGGFGARGVEGKVMAIQYARENNIPFFGICLGMQCASIEFARNVCNLADANSTEFDPATPHPVISLLEEQQNITKKGGTMRLGAQACFVEEGTKAYEAYKKAMVSERHRHRYEFNDAYKERFLANGMRFSGHSQEDRLVEIMEIINHPWFVCVQFHPEFKSKPTKAHPLFREFIRATLKK

Annotated regions:
phrase: KHIFVTGGVVSSLGKGLNSASIGMLLESRGLKVRLQKFDPYVNVDPGTMSPYEHGEVYVTEDGAETDLDLGHYERFTNAETNKYCNFTTGSIYYSVIMKERNGEYLGKTVQVIPHITNEVIECIKKLDGPDTDVVISEIGGIVGDIESQLFLEAIRQFGQTIGRGNVLYIHLTLVPYLSAADEIKTKPTQHSVGMLRQAGVQPDIIICRTEKHLSEEIKEKISLFCNVDKNAIIEEKDVKPYLYEIPLILMEQGLDKLI
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: EIAIVGKYIGHQSAYESIYESLIHGGIENNARVKERRIESEDVERFGAEACLKGVNGILAPGGFGARGVEGKVMAIQYARENNIPFFGICLGMQCASIEFARNVCNLADANSTEFDPATPHPVISLLEEQQNITKKGGTMRLGAQACFVEEGTKAYEAYKKAMVSERHRHRYEFNDAYKERFLANGMRFSGHSQEDRLVEIMEIINHPWFVCVQFHPEFKSKPTKAHPLFREF
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain

phrase: KHIFVTGGVVSSLGKGLNSASIGMLLESRGLKVRLQKFDPYVNVDPGTMSPYEHGEVYVTEDGAETDLDLGHYERFTNAETNKYCNFTTGSIYYSVIMKERNGEYLGKTVQVIPHITNEVIECIKKLDGPDTDVVISEIGGIVGDIESQLFLEAIRQFGQTIGRGNVLYIHLTLVPYLSAADEIKTKPTQHSVGMLRQAGVQPDIIICRTEKHLSEEIKEKISLFCNVDKNAIIEEKDVKPYLYEIPLILMEQGLDKLIIQKLQ
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: AYESIYESLIHGGIENNARVKERRIESEDVERFGAEACLKGVNGILAPGGFGARGVEGKVMAIQYARENNIPFFGICLGMQCASIEFARNVCNLADANSTEFDPATPHPVISLLEEQQNITKKGGTMRLGAQACFVEEGTKAYEAYKKAMVSERHRHRYEFNDAYKERFLANGMRFSGHSQEDRLVEIMEIINHPWFVCVQFHPEFKSKPTKAHPLFREFI
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase
Protein sequence:
MGGKWSKSRVPGWDTIRERMRRARPEPAAEGVGAASRDLEQRGAITINNTAGNNAASTWLEAQEEEEEVGFPVTPQVPLRPMTYKAAVDFSHFLKEKGGLEGLIHSQKRQDILDLWVYHTQGYFPDWQNYTPGPGVRFPLTFGWCFKLVPVDPDKVEEATAGENNCLLHPMNQHGMDDPEGEVLEWRFDSRLAFHHMAREKHPEYFKDC

Annotated regions:
Protein sequence:
MTNRSQLASWQALEKSATKMKQSHLRDLFAKDDARFSQFSTQIPGLLFDYSKQRIDKDVFTQLIALAKECDISAWREKMFNGEKINITENRAVLHTALRNRAHTPLIVDGENVTELVDNELAKIKLFVEKVRSGKWLGYSGKPVKDVVSIGVGGSNLGPQMATEALKALSDDTLNVHYVSNADGVQIASVLKNIDAETTLFVIASKTFTTSETMTNAKTAVDWFLQTAKDNAAIAKHFVAVSTNLEKTAEFGISNDNVFTMWDWVGGRFSLWSAIGLPIALYAGYDAFEAILEGAYEVDEHFKNAPLEQNIPLIMALLSVWNTSFLGYTSQAILPYDQALHMLPAYLQQGEMESNGKHVNFAGETVPYTTVPIIWGMTGINGQHAFYQCLHQGNVIVPADFIASIKPQVNVDKHHDILLSNFFAQTEALMNGVDEQEITADLTAKGKSQAQIDELLKHKIHQGNRPTTSMLLDSVDAKTVGRLIALYEHKIFCQGIILEICSFDQWGVELGKGLASKIEAELVDERVKYAHDSSTNGLMAYYKQHRTQ

Annotated regions:
phrase: GIILEICSFDQWGVELG
type: CONSERVED_SITE
name: Phosphoglucose_isomerase_CS
description: Phosphoglucose isomerase, conserved site

phrase: DWVGGRFSLWSAI
type: CONSERVED_SITE
name: Phosphoglucose_isomerase_CS
description: Phosphoglucose isomerase, conserved site

phrase: DNELAKIKLFVEKVRSGKWLGYSGKPVKDVVSIGVGGSNLGPQMATEALKALSDDTLNVHYVSNADGVQIASVLKNIDAETTLFVIASKTFTTSETMTNAKTAVDWFLQTAKDNAAIAKHFVAVSTNLEKTAEFGISNDNVFTMWDWVGGRFSLWSAIGLPIAL
type: DOMAIN
name: SIS_PGI_1
description: Phosphoglucose isomerase, SIS domain 1

phrase: AILPYDQALHMLPAYLQQGEMESNGKHVNFAGETVPYTTVPIIWGMTGINGQHAFYQCLHQGNVIVPADFIASIKPQVNVDKHHDILLSNFFAQTEALMNGVDEQEITADLTAKGKSQAQIDELLKHKIHQGNRPTTSMLLDSVDAKTVGRLIALYEHKIFCQGIILEICSFDQWGVELGKGLASK
type: DOMAIN
name: SIS_PGI_2
description: Phosphoglucose isomerase, SIS domain 2
Protein sequence:
MPATPVRLDLSSPVRGPRGKPPRHFVDLTPDERVAAVTELGEKPFRAKQLATHYFTHLTADPAAMTDLPAASRDKLVEALFPRLLTNVRTQTADGGTTVKTLWHLFDNAKVESVLMRYSNRTTLCISSQAGCGLACAFCATGQMGLTRNLSTAEIVEQVREAARALQAGEVPGGPTRLSNVVFMGMGEPLANYKAIMATVRTLVAPDGLGLSARNVTVSTVGMVPAMRKLADEGIPVTLALSLHAPDDELRSELVPVNTRWDVDEALDAAHHYFEVTGRRVSIEYALIKDINDHAWRADLLGEKLNARGKGWVHCNPIPLNPVPNSKWTASDPRVEQEFVARLRAHGIPTTIRDTRGSDIDGACGQLAAEEDE

Annotated regions:
phrase: YSNRTTLCISSQAGCGLACAFCATGQMGLTRNLSTAEIVEQVREAARALQAGEVPGGPTRLSNVVFMGMGEPLANYKAIMATVRTLVAPDGLGLSARNVTVSTVGMVPAMRKLADEGIPVTLALSLHAPDDELRSELVPVNTRWDVDEALDAAHHYFEVTGRRVSIEYALIKDINDHAWRADLLGEKLNARGKGWVHCNPIPLNPVPNSKWTASDPRVEQEFVARLRAHGIPTTIRDTRGS
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SSQAGCGLACAFCATGQMGLTRNLSTAEIVEQVREAARALQAGEVPGGPTRLSNVVFMGMGEPLANYKAIMATVRTLVAPDGLGLSARNVTVSTVGMVPAMRKLADEGIPVTLALSLHAPDDELRSELVPVNTRWDVDEALDAAHHYFEVTGRRVSIEYALIKDINDHA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: DLTPDERVAAVTELGEKPFRAKQLATHYFTHLTADPAAMTDLPAASRDKLV
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: KPPRHFVDLTPDERVAAVTELGEKPFRAKQLATHYFTHLTADPAAMTDLPAASRDKLVEALFPRLLTNVRTQTADGGTTVKTLWHLFDNAKVESVLMRYSNRTTLCISSQAGCGLACAFCATGQMGLTRNLSTAEIVEQVREAARALQAGEVPGGPTRLSNVVFMGMGEPLANYKAIMATVRTLVAPDGLGLSARNVTVSTVGMVPAMRKLADEGIPVTLALSLHAPDDELRSELVPVNTRWDVDEALDAAHHYFEVTGRRVSIEYALIKDINDHAWRADLLGEKLNARGKGWVHCNPIPLNPVPNSKWTASDPRVEQEFVARLRAHGIPTTIRDTRGSDIDGACGQLAAE
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MNQGKIITVSGPLVVASGMQEANIQDICRVGHLGLVGEIIEMRRDQASIQVYEETSGIGPGEPVVTTGCPLSVELGPGLISEMFDGIQRPLDRFQKATDSDFLIRGVAIPSLDRKAKWAFIPKLSVGQEVVAGDILGTVQETAVIEHRVMVPYKVSGTLVAIHAGDFTVTDTVYEIKQEDGSIYQGSLMQTWPVRQSRPVAQKLIPVEPLVTGQRVIDTFFPVTKGGAAAVPGPFGAGKTVVQHQIAKFANVDIVIYVGCGERGNEMTDVLNEFPELIDPNTGQSIMERTVLIANTSNMPVAAREASIYTGITIAEYFRDMGYSVAIMADSTSRWAEALREMSGRLQEIPGDEGYPAYLGSRIAEYYERAGRVRTLGSQEREGTITAIGAVSPPGGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYQDDVGSYIDRKQQSNWSNKVTRAMAILQREASLEEIVRLVGLDSLSEQDRLIMAVARQIREDYLQQNAFDSVDTFTSFPKQEAMLTNILTFNEEASKALSLGAYFNEIMEGTAQVRDRIARSKFIPEENLEQIKGLTQKVTKEIHHVLAKGGI

Annotated regions:
phrase: PAINWLTSY
type: ACTIVE_SITE
name: ATPase_a/bsu_AS
description: ATPase, alpha/beta subunit, nucleotide-binding domain, active site

phrase: GQRVIDTFFPVTKGGAAAVPGPFGAGKTVVQHQIAKFANVDIVIYVGCGERGNEMTDVLNEFPELIDPNTGQSIMERTVLIANTSNMPVAAREASIYTGITIAEYFRDMGYSVAIMADSTSRWAEALREMSGRLQEIPGDEGYPAYLGSRIAEYYERAGRVRTLGSQEREGTITAIGAVSPPGGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSY
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_nucl-bd
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain

phrase: IPSLDRKAKWAFIPKLSVGQEVVAGDILGTVQETAVIEHRVMVPYKVSGTLVAIHAGDFTVTDTVYEIKQEDGSIYQGSLMQTWPV
type: DOMAIN
name: ATP-synth_a_Xtn
description: ATPsynthase alpha/beta subunit, barrel-sandwich domain

phrase: IITVSGPLVVASGMQEANIQDICRVGHLGLVGEIIEMRRDQASIQVYEETSGIGPGEPVVTT
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_N
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain

phrase: RKQQSNWSNKVTRAMAILQREASLEEIVRLVGLDSLSEQDRLIMAVARQIREDYLQQNAFDSVDTFTSFPKQEAMLTNILTFNEEASKA
type: DOMAIN
name: ATP-synt_VA_C
description: ATP synthase A/B type, C-terminal domain
Protein sequence:
MRYIRLCIISLLATLPLAVHASPQPLEQIKQSESQLSGRVGMIEMDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTGASERGARGIVALLGPNNKAERIVVIYLRDTPASMAERNQQIAGIGAALIEHWQR

Annotated regions:
phrase: FPMMSTFKVVLCGAV
type: ACTIVE_SITE
name: Beta-lactam_class-A_AS
description: Beta-lactamase, class-A active site

phrase: MDLASGRTLTAWRADERFPMMSTFKVVLCGAVLARVDAGDEQLERKIHYRQQDLVDYSPVSEKHLADGMTVGELCAAAITMSDNSAANLLLATVGGPAGLTAFLRQIGDNVTRLDRWETELNEALPGDARDTTTPASMAATLRKLLTSQRLSARSQRQLLQWMVDDRVAGPLIRSVLPAGWFIADKTGASERGARGIVALLGPNNKAERIVVI
type: DOMAIN
name: Beta-lactam_cat
description: Beta-lactamase class A, catalytic domain
Protein sequence:
MSGRITNSNPKTGRRKCLFVSFEVSPYQEVWRLQKQVLEAKIQRWLDEDVIFLLEHEPVFTLGRRGNRDNLLIPEEFLAEQGIDVVHVERGGDITYHGPGQLVAYPISDLRRTASGVVEFVERLEEVMIRVAADFGVHAERNAKNRGVWVGPKKLGSIGIAIRHGITYHGLALNIRNSLEPFSWINPCGLQNTMMTSISIESGRMIDMEEARASMSRHLEEVFSIRLKSVNPRVLRHRLGVCRKRKPDWLRIRLPSGPVFSKTRALLTETGLHTVCDEALCPNRGKCFSEGTATFLILGDRCTRNCRFCAVKKGSPLPPDPDEPARVARAASTMGLEYVVVTSVTRDDLPDGGAREFCQVVHEIRQTMPEAGIELLVPDFQGNEEAIDSVVSAGPHVLNHNVETVPRLYRDVRPKAVYQRSLELLARIKAGSKDVVAKSGLMLGLGEEEYEVEKVLEDLLEAGCDVLTLGQYLQPSSQHVRVQRYLRPEEFDKWRDKALCMGFKAVASGPFVRSSYKARELYQNAIGQI

Annotated regions:
phrase: RGGDITYHGPGQLVA
type: CONSERVED_SITE
name: Octanoyltransferase_CS
description: Octanoyltransferase, conserved site

phrase: YQEVWRLQKQVLEAKIQRWLDEDVIFLLEHEPVFTLGRRGNRDNLLIPEEFLAEQGIDVVHVERGGDITYHGPGQLVAYPISDLRRTASGVVEFVERLEEVMIRVAADFGVHAERNAKNRGVWVGPKKLGSIGIAIRHGITYHGLALNIRNSLEPFSWINPCGLQNTMMTSISIESGRMIDMEEARASMSRH
type: DOMAIN
name: BPL_LPL_catalytic
description: Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain

phrase: RKRKPDWLRIRLPSGPVFSKTRALLTETGLHTVCDEAL
type: DOMAIN
name: LIAS_N
description: Lipoyl synthase, N-terminal

phrase: WLDEDVIFLLEHEPVFTLGRRGNRDNLLIPEEFLAEQGIDVVHVERGGDITYHGPGQLVAYPISDLRRTASGVVEFVERLEEVMIRVAADFGVHAERNAKNRGVWVGPKKLGSIGIAIRHGITYHGLALNIRNSLEPFSWINPCGLQNTMMTSISIESGRMIDMEEARASMSRHLEEVFSIR
type: DOMAIN
name: BPL_LPL_catalytic
description: Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain

phrase: TATFLILGDRCTRNCRFCAVKKGSPLPPDPDEPARVARAASTMGLEYVVVTSVTRDDLPDGGAREFCQVVHEIRQTMPEAGIELLVPDFQGNEEAIDSVVSAGPHVLNHNVETVPRLYRDVRPKAVYQRSLELLARIKAGSKDVVAKSGLMLGLGEEEYEVEKVLEDLLEAGCDVLTLGQYLQPSSQHVRVQRYLRPEEFDKWRDKA
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: ILGDRCTRNCRFCAVKKGSPLPPDPDEPARVARAASTMGLEYVVVTSVTRDDLPDGGAREFCQVVHEIRQTMPEAGIELLVPDFQGNEEAIDSVVSAGPHVLNHNVETVPRLYRDVRPKAVYQRSLELLARIKAGSKDVVAKSGLMLGLGEEEYEVEKVLED
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: FSEGTATFLILGDRCTRNCRFCAVKKGSPLPPDPDEPARVARAASTMGLEYVVVTSVTRDDLPDGGAREFCQVVHEIRQTMPEAGIELLVPDFQGNEEAIDSVVSAGPHVLNHNVETVPRLYRDVRPKAVYQRSLELLARIKAGSKDVVAKSGLMLGLGEEEYEVEKVLEDLLEAGCDVLTLGQYLQPSSQHVRVQRYLRPEEFDKWRDKALCMGF
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MLKFRIRPVRHIRCYKRHAYFLRYNHTTTPAQKLQAQIEQIPLENYRNFSIVAHVDHGKSTLSDRLLEITHVIDPNARNKQVLDKLEVERERGITIKAQTCSMFYKDKRTGKNYLLHLIDTPGHVDFRGEVSRSYASCGGAILLVDASQGIQAQTVANFYLAFSLGLKLIPVINKIDLNFTDVKQVKDQIVNNFELPEEDIIGVSAKTGLNVEELLLPAIIDRIPPPTGRPDKPFRALLVDSWYDAYLGAVLLVNIVDGFVRKNDKVICAQTKEKYEVKDIGIMYPDRTSTGTLKTGQVGYLVLGMKDSKEAKIGDTIMHLSKVNETEVLPGFEEQKPMVFVGAFPADGIEFKAMDDDMSRLVLNDRSVTLERETSNALGQGWRLGFLGSLHASVFRERLEKEYGSKLIITQPTVPYLVEFTDGKKKLITNPDEFPDGATKRVNVAAFHEPFIEAVMTLPQEYLGSVIRLCDSNRGEQIDITYLNTNGQVMLKYYLPLSHLVDDFFGKLKSVSRGFASLDYEDAGYRISDVVKLQLLVNGNAIDALSRVLHKSEVERVGREWVKKFKEYVKSQLYEVVIQARANNKIIARETIKARRKDVLQKLHASDVSRRKKLLAKQKEGKKHMKTVGNIQINQEAYQAFLRR

Annotated regions:
phrase: NYRNFSIVAHVDHGKSTLSDRLLEITHVIDPNARNKQVLDKLEVERERGITIKAQTCSMFYKDKRTGKNYLLHLIDTPGHVDFRGEVSRSYASCGGAILLVDASQGIQAQTVANFYLAFSLGLKLIPVINKIDLNFTDVKQVKDQIVNNFELPEEDIIGVSAKTGLNVEELLLPAIIDRI
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: GAVLLVNIVDGFVRKNDKVICAQTKEKYEVKDIGIMYPDRTSTGTLKTGQVGYLVLGMKDSKEAKIGDT
type: DOMAIN
name: EFTu-like_2
description: Translation elongation factor EFTu-like, domain 2

phrase: EPFIEAVMTLPQEYLGSVIRLCDSNRGEQIDITYLNTNGQVMLKYYLPLSHLVDDFFGKLKSVSRGFASLDYEDAGYRIS
type: DOMAIN
name: LepA_IV
description: Elongation factor 4, domain IV

phrase: YRNFSIVAHVDHGKSTLSDRLLEITHVIDPNARNKQVLDKLEVERERGITIKAQTCSMFYKDKRTGKNYLLHLIDTPGHVDFRGEVSRSYASCGGAILLVDASQGIQAQTVANFYLAFSLGLKLIPVINKIDLNFTDVKQVKDQIVNNFELPEEDIIGVSAKTGLNVEE
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: ENYRNFSIVAHVDHGKSTLSDRLLEITHVIDPNARNKQVLDKLEVERERGITIKAQTCSMFYKDKRTGKNYLLHLIDTPGHVDFRGEVSRSYASCGGAILLVDASQGIQAQTVANFYLAFSLGLKLIPVINKIDLNFTDVKQVKDQIVNNFELPEEDIIGVSAKTGLNVEELLLPAIIDRIPPP
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: FHEPFIEAVMTLPQEYLGSVIRLCDSNRGEQIDITYLNTNGQVMLKYYLPLSHLVDDFFGKLKSVSRGFASLDYEDAGYRISDVVK
type: DOMAIN
name: EFG_V-like
description: Elongation factor EFG, domain V-like

phrase: VNGNAIDALSRVLHKSEVERVGREWVKKFKEYVKSQLYEVVIQARANNKIIARETIKARRKDVLQKLHASDVSRRKKLLAKQKEGKKHMKTVGNIQINQEAYQAF
type: DOMAIN
name: LepA_CTD
description: GTP-binding protein LepA, C-terminal

phrase: NFSIVAHVDHGKS
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: ERGITIKA
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: HLIDTPGHVD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: RSYASCGGAIL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: LIPVINKID
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: DKLEVERERGITIKA
type: CONSERVED_SITE
name: G_TR_CS
description: Tr-type G domain, conserved site
Protein sequence:
MLNNAMSVVILAAGKGTRMYSDLPKVLHTLAGKAMVQHVIDAANELGAAHVHLVYGHGGDLLKQALKDDNLNWVLQAEQLGTGHAMQQAAPFFADDEDILMLYGDVPLISVETLQRLRDAKPQGGIGLLTVKLDDPTGYGRITRENGKVTGIVEHKDATDEQRQIQEINTGILIANGADMKRWLAKLTNNNAQGEYYITDIIALAYQEGREIVAVHPQRLSEVEGVNNRLQLSRLERVYQSEQAEKLLLAGVMLRDPARFDLRGTLTHGRDVEIDTNVIIEGNVTLGNRVKIGTGCVIKNSVIGDDCEISPYTVVEDANLAAACTIGPFARLRPGAELLEGAHVGNFVEMKKARLGKGSKAGHLTYLGDAEIGDNVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVGKGATIAAGTTVTRNVGENALAISRVPQTQKEGWRRPVKKK

Annotated regions:
phrase: GVMLRDPARFDLRGTLTHGRDVEIDTNVIIEGNVTLGNRVKIGTGCVIKNSVIGDDCEISPYTVVEDANLAAACTIGPFARLRPGAELLEGAHVGNFVEMKKARLGKGSKAGHLTYLGDAEIGDNVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVGKGATIAAGTTVTRNVGENALAISRVP
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain

phrase: VGSDTQLVAPVTVGKGATIAAGTTVTRN
type: CONSERVED_SITE
name: Hexapep_transf_CS
description: Hexapeptide transferase, conserved site

phrase: TIIGDDVFVGSDTQLVAPVTVGKGATIAAGTTVT
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: HGRDVEIDTNVIIEGNVTLGNRVKIGTGCVIK
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: VVILAAGKGTRMYSDLPKVLHTLAGKAMVQHVIDAANELGAAHVHLVYGHGGDLLKQALKDDNLNWVLQAEQLGTGHAMQQAAPFFADDEDILMLYGDVPLISVETLQRLRDA
type: DOMAIN
name: MobA-like_NTP_Trfase
description: MobA-like NTP transferase
Protein sequence:
MGNRRLAREHALQTLYYADTGKTQGKDINEYKEDFKDSLDAAGFEFCSGIIDGALEHQAELDKIISAYAKNWSLNRMSVVDRSILRMAAYEMLFSPENTPVAAVIDEAIELAKKFSTENSSRFINGLLDQIKKERKNGQN

Annotated regions:
phrase: AREHALQTLYYADTGKTQGKDINEYKEDFKDSLDAAGFEFCSGIIDGALEHQAELDKIISAYAKNWSLNRMSVVDRSILRMAAYEMLFSPENTPVAAVIDEAIELAKKFSTENSSRFINGLLDQI
type: DOMAIN
name: NusB_RsmB_TIM44
description: NusB/RsmB/TIM44
Protein sequence:
MCSIGEDDFGDTGGLHAMTAGGPVQIATGGTGECQKCGQHSDDLFKVNFRSEECRDCFLNYARHKFRAALGAAKALPRDSDVLLLLDGSIESIVLLDMLHYAQTQNTFKRLHCQAKVLYLDESVVQEQQSLDIDRLQKLQDRYTPFDLFVIELGTDLSNLRPLKNYTPKTSREESDLKIKLDKLRTLSARQDYLQQQRKRFLASVAHQLNCTHVFVPSISKDLATQFLTSIALGRGGSAALDVALCDDRLDHDIKLLRPLKDLNEQEVQLYVRARNLEDLKLGPSLATYGQEKGETASLQNLTAAFVRNLQENYAATVSTVFRTGNKIAPNRHVDQDMCQQCQSPLDSLLSDTLLAIEYSRVVSLEGSKLSNHNNDLEQLSMQRLNKDDRLCHACRNVQDEYL

Annotated regions:
Protein sequence:
MEDMAYSVEIDRKWQKIWEETKLYKFNPENVDKKLYCLEMFPYPSGAKLHIGHWYNYGPTDSWARMKRMQGYEVFHPMGFDAFGLPAENYAIKTGIHPYDSTMENIRTMERQLREMGVTFDWDYEIITCLPEYYKWTQWIFLKLYEAGLAYRKKAPVNWCPSCQTVLANEQVIDGKCERCGTEVTKKELTQWFFKITAYAEELLEKLDDLDWPEKTKMMQRNWIGKSEGAEIEFKIDGKDLSFRVFTTRADTLFGATYVVLAPEHELVDLITTEEYKEAVEEYKEYAKKQSEIERLSTEKEKTGVFTGAYAIHPLTGEKLPIWIADYVLVTYGTGCVMGVPGHDERDYEFATKYNLPIKRVIKGVGDVDDSLPFVEYGILVNSEEFTGMTSEEARVKIVEKLKAEGKAEFKVNYRMRDWLVSRQRYWGAPIPIIHCERCGIVPVPEEDLPVLLPYDVEFEPTGESPLKKHAGFMNVTCPKCGGPALRDPDTLDTFVDSSWYYLRYPDNKNDKEPFNKEWINKMLPVDKYVGGAEHATMHLLYSRFITKVLRDLGYLNFDEPFLSLVHQGTILGPDGSRMSKSRGNVISPDDYIKQYGSDVFRLYLMFGFSYSEGGPWSDEGIKAIARFVNRVERFIEKFIETRQNPGKTKEEMEDAEKELNYVRHYTIKHVTLDADKFEFNTAIARIMELVNALYKYENEVEVKNMKFYEDVVRDFVKILAPFAPHFSEEMWERLGYEYSVFNQKWPEWDEKALERDMIEIAIQVNGK

Annotated regions:
phrase: YVRHYTIKHVTLDADKFEFNTAIARIMELVNALYKYENEVEVKNMKFYEDVVRDFVKILAPFAPHFSEEMWERLGYEYSVFNQKWPEWDEKALERDMIEIAIQVNG
type: DOMAIN
name: M/V/L/I-tRNA-synth_anticd-bd
description: Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding

phrase: RMRDWLVSRQRYWGAPIPIIHCERCGIVPVPEEDLPVLLPYDVEFEPTGESPLKKHAGFMNVTCPKCGGPALRDPDTLDTFVDSSWYYLRYPDNKNDKEPFNKEWINKMLPVDKYVGGAEHATMHLLYSRFITKVLRDLGYLNFDEPFLSLVHQGTILGPDGSRMSKSRGNVISPDDYIKQYGSDVFRLYL
type: DOMAIN
name: aa-tRNA-synth_Ia
description: Aminoacyl-tRNA synthetase, class Ia

phrase: RNWIGKSEGAEIEFKIDGKDLSFRVFTTRADTLFGATYVVLAPEHELVDLITTEEYKEAVEEYKEYAKKQSEIERLSTEKEKTGVFTGAYAIHPLTGEKLPIWIADYVLVTYGTGCVMGVPGHDERDYEFATKYNLPIKRVIKGVGDVDDSLPFVEYGILVNSEEFTGMTSEEARVKIVEK
type: DOMAIN
name: Leu_tRNA-synth_edit
description: Leucyl-tRNA synthetase, editing domain

phrase: FPYPSGAKLHIGHWYNYGPTDSWARMKRMQGYEVFHPMGFDAFGLPAENYAIKTGIHPYDSTMENIRTMERQLREMGVTFDWDYEIITCLPEYYKWTQWIFLKLYEAGLAYRKKAPVNWCPSCQTVLANEQVIDGKCERCGTE
type: DOMAIN
name: Methionyl/Leucyl_tRNA_Synth
description: Methionyl/Leucyl tRNA synthetase
Protein sequence:
METLSFDSSALKKFVHPNELGEMQAMVTAADSELRNGTGAGADFRDWLHLPTDYDKDEFARIEAAAKKIQADSEVLVVIGIGGSYLGARMAVDFLHHSFYQAQTAADRKQPLVLFAGNSLSSSYIADLIDVIGDRDFSVNVISKSGTTTEPSIAFRVFRQLLEDKYGVDGANARIYATTDRQRGALKTEADAEGWGTFVIPDGVGGRFSVLTAVGLLPIAVSGADIDQLMAGAAKAEATYVNPDLTQNEAYQYAAYRNILYRKGYTTELLENYEPNMTMLAEWWKQLAGESEGKDQKGIYPSSANFTTDLHSLGQYIQEGRRNLMETVVKLAEPNHNVKVPSAKSDFDGLKYLEGKEIDWVNTQAYRAVVAAHTTGGVPVMTVNIAKEDEFTLGYLIYFFEVAIAISGYLNGINPFNQPGVEAYKTNMFGLLGKPGFEEIGEQLKKEMDD

Annotated regions:
phrase: GYLNGINPFNQPGVEAY
type: CONSERVED_SITE
name: Phosphoglucose_isomerase_CS
description: Phosphoglucose isomerase, conserved site

phrase: TELLENYEPNMTMLAEWWKQLAGESEGKDQKGIYPSSANFTTDLHSLGQYIQEGRRNLMETVVKLAEPNHNVKVPSAKSDFDGLKYLEGKEIDWVNTQAYRAVVAAHTTGGVPVMTVNIAKEDEFTLGYLIYFFEVAIAISGYLNGINPFNQPGVEAYKTNMFG
type: DOMAIN
name: SIS_PGI_2
description: Phosphoglucose isomerase, SIS domain 2

phrase: DGVGGRFSVLTAV
type: CONSERVED_SITE
name: Phosphoglucose_isomerase_CS
description: Phosphoglucose isomerase, conserved site

phrase: KDEFARIEAAAKKIQADSEVLVVIGIGGSYLGARMAVDFLHHSFYQAQTAADRKQPLVLFAGNSLSSSYIADLIDVIGDRDFSVNVISKSGTTTEPSIAFRVFRQLLEDKYGVDGANARIYATTDRQRGALKTEADAEGWGTFVIPDGVGGRFSVLTAVGLLPIA
type: DOMAIN
name: SIS_PGI_1
description: Phosphoglucose isomerase, SIS domain 1
Protein sequence:
MPKESGRKVVATNRKARHDYHVLDTYEAGIALMGTEVKSLREGHASMVDGFCTFYNDELWMEAIHIPEYNQGSWTNHAARRRRKLLLHREELIKISRKVQEAGYTIVPLQLYFVDGRAKVEIGVARGKREYDKRQTLREQQDNREAQREMRERNRRRG

Annotated regions:
phrase: AGIALMGTEVKS
type: CONSERVED_SITE
name: SsrA-bd_prot_CS
description: SsrA-binding protein, conserved site
Protein sequence:
MSITTPRILGIDPGLRVTGFGVIELHGKQLVYVASGCIKSNDKESLPERIKTLFAGISEVIATYQPNQAAVEKVFVNVNPQSTLLLGQARGAAISALVHADLPVAEYTALQTKQAVVGHGKAAKDQVQAMVVRLLNLPGAPTADAADALACAIAHAHGGQGLGAMATAGYRIRGGRLIG

Annotated regions:
phrase: GHGKAAKDQVQAMVVRLLNLPGAPTADAADALAC
type: BINDING_SITE
name: X-over_junc_endoDNase_Mg_BS
description: Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site