nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MAIMHKIGCAGSEVETDRVLEKDQANNGHFVDSDCCFQETGSTGTANSICTLNDSEDDNSSLNSVDNNECTNLDCGGKKHKNLSPNPSFHVNINAAEFIPKSHNGYAPKSMNPPPEQLDSPCYPHFDQDSSSVIYPSPPSTYYPNMYVSANTFIPMPYAHYTDNMYHAKPVNRPNFLPREGTPPPFAQQPAEQFSPFNSEYESLLDFRALILGNLPVDYKISELLSLIHSGPLEKIQSNPGKRRIIITFLDSADAFFFYERYHPRGFIFHGRPLKLTFARPSPLPESIQNFCSNTAASRNVFIGNLPSSYHEKEIEEAFGKFGKIEHIKILSKKNIAFVHFLNIRDAIKVVRTLSCDPDYHSWRIFFGSDRCANHPPSFDERSCFTSKQNPDTTSDRCRQQESKDNGNRTVFLGNLHTKTKGHEICDLIRHGGLQDFHYIPEKHICFVTFITYSAANAFHDYLAEEEVLLHGRRIKVGWGKESGPLPRVLEDSILMGASRNVYFSHISDSLTTEELELILRQYGEIESIKYLKNRSSGFVAYTNISNAMKAVNGLPIHPLFKKSKIRYAPDRCEQELQKSKSNSPIQQNVPLQQFITPPFSYPVAYCPAIPPGSDPILNFGIQYQPFIPFTAVPSFPFNCNVPNYPQTSDHEND

Annotated regions:
phrase: RNVFIGNLPSSYHEKEIEEAFGKFGKIEHIKILSKKNIAFVHFLNIRDAIKVVRTL
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: RNVYFSHISDSLTTEELELILRQYGEIESIKYLKNRSSGFVAYTNISNAMKAVNGLPIHPLFKKSKIRYAP
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: TVFLGNLHTKTKGHEICDLIRHGGLQDFHYIPEKHICFVTFITYSAANAFHDYLAEEEVLLHGRRIKV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: NVFIGNLPSSYHEKEIEEAFGKFGKIEHIKILSKKNIAFVHFLNIRDAIKVVRTLSCDPDYHSWRI
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: NVYFSHISDSLTTEELELILRQYGEIESIKYLKNRSSGFVAYTNISNAMKAVNGLPIHPLFKKSKIRY
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: ALILGNLPVDYKISELLSLIHSGPLEKIQSNPGKRRIIITFLDSADAFFFYERYHPRGFIFHGRPLKL
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: RTVFLGNLHTKTKGHEICDLIRHGGLQDFHYIPEKHICFVTFITYSAANAFHDYLAEEEVLLHGRRIKVGWGK
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: VFIGNLPSSYHEKEIEEAFGKFGKIEHIKILSKKNIAFVHFLNIRDAIKVVRT
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: ISDSLTTEELELILRQYGEIESIKYLKNRSSGFVAYTNISNAMKAVNG
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain
Protein sequence:
MTKFIFITGGVVSGIGKGITAASLGRLLKQRGLKVASQKLDPYINVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERFIDEDLTRFSNLTSGKVYWSVLNCERSGGYLGETVQVIPHITGEIIGFIYAGAEKSGADVLITEIGGTTGDIESQPFLEAIRQISLARGRENCLFIHVTLVPYLKGSNEHKSKPTQHSVKELRSMGISPDIIIARADEPLDDTIKAKISLFCNVKRDCVIENLTVPCLYEAPLMLNESGLDEVVCRELNLKTKDPDLREWKDMVQKIRKRQREVVIAIVGKYVKLPDAYLSIIESLNHAGYDTGSKVRIKWVESSNLTKQNVADELKDAEGIIIPGGFGDRGVEGKIIACQYARDNNIPFLGICLGMQISVIEFARNVCGLKDAHSSEFNEICAHPVIDLMEDQIGITRKGGTMRLGAYPCKTKKETRLRDLYGKELISERHRHRYEFNNKYREVLNRNGMVISGVSPDNKLVEAIELANHKFFIGVQYHPEFKSRPNKPHPLFLGLLKAAIEKE

Annotated regions:
phrase: LPDAYLSIIESLNHAGYDTGSKVRIKWVESSNLTKQNVADELKDAEGIIIPGGFGDRGVEGKIIACQYARDNNIPFLGICLGMQISVIEFARNVCGLKDAHSSEFNEICAHPVIDLMEDQIGITRKGGTMRLGAYPCKTKKETRLRDLYGKELISERHRHRYEFNNKYREVLNRNGMVISGVSPDNKLVEAIELANHKFFIGVQYHPEFKSRPNKPHPLFLGLL
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: KFIFITGGVVSGIGKGITAASLGRLLKQRGLKVASQKLDPYINVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERFIDEDLTRFSNLTSGKVYWSVLNCERSGGYLGETVQVIPHITGEIIGFIYAGAEKSGADVLITEIGGTTGDIESQPFLEAIRQISLARGRENCLFIHVTLVPYLKGSNEHKSKPTQHSVKELRSMGISPDIIIARADEPLDDTIKAKISLFCNVKRDCVIENLTVPCLYEAPLMLNESGLDEVVCRELN
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: KFIFITGGVVSGIGKGITAASLGRLLKQRGLKVASQKLDPYINVDPGTMSPFQHGEVFVTDDGAETDLDLGHYERFIDEDLTRFSNLTSGKVYWSVLNCERSGGYLGETVQVIPHITGEIIGFIYAGAEKSGADVLITEIGGTTGDIESQPFLEAIRQISLARGRENCLFIHVTLVPYLKGSNEHKSKPTQHSVKELRSMGISPDIIIARADEPLDDTIKAKISLFCNVKRDCVIENLTVPCLYEAPLMLNESGLDEVVC
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: VVIAIVGKYVKLPDAYLSIIESLNHAGYDTGSKVRIKWVESSNLTKQNVADELKDAEGIIIPGGFGDRGVEGKIIACQYARDNNIPFLGICLGMQISVIEFARNVCGLKDAHSSEFNEICAHPVIDLMEDQIGITRKGGTMRLGAYPCKTKKETRLRDLYGKELISERHRHRYEFNNKYREVLNRNGMVISGVSPDNKLVEAIELANHKFFIGVQYHPEFKSRPNKPHPLFLGL
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain
Protein sequence:
MEFDVTIEIPKGSRNKYEVDHETGRIRLDRRLFTSTAYPTDYGFVENTLGEDGDPLDALVILDEPTFPGCLIRCRAIGMFRMTDEAGGDDKLLCVPSTDPRVEHLRDIHHVSEFDRLEIQHFFEVYKDLEPGKSVEGADWVGRTEAEAEIERSYKRFKDQGGH

Annotated regions:
Protein sequence:
MNDMAKNLVLWLIIAAVLLMVFQNFKPQSRDEALSYSDFVQDVQSGQVKSVVVDGLVITGEKADGSRFKTIQPQIIDDELTNELVRSNVQFVGREPESPSIWQQLLVASFPILIIIAVFMFFMRQMQGGAGGRSGPMAFGKSKARLLGEDQIKTTFADVAGVDEAKEEVQELVEFLRDPSKFQRLGGNIPRGVLMCGPPGTGKTLLAKAIAGEAKVPFFSISGSDFVEMFVGVGASRVRDMFEQAKKQAPCIIFIDEIDAVGRHRGAGVGGGHDEREQTLNQLLVEMDGFEGNEGVIVIAATNRPDVLDNALLRPGRFDRQVFVGLPDIRGREQILKVHMRKVPLDDKVNPQTIARGTPGFSGADLANLVNEAALFAARANKRVVTMDDFERARDKIMMGAERKSMVMNEKEKVNTAYHEAGHAIVGRLMPEHDPVHKVTIIPRGRALGVTQFLPEEDKYSLSRRAIVSQICSLFGGRIAEEMTLGAEGITTGASNDIERATQLARNMVTKWGLSEKLGPLHYGEDESGQPGQGNPVSGKTSAEIDAEVRRIIDDCYSRAKKILEENRDILEAMKDALMEYETLDAEQVDDLMARRKVRPPHDWHDSDFGSGGGKPSGEAGSDEAEKPIGGPVSGH

Annotated regions:
phrase: MVMNEKEKVNTAYHEAGHAIVGRLMPEHDPVHKVTIIPRGRALGVTQFLPEEDKYSLSRRAIVSQICSLFGGRIAEEMTLGAEGITTGASNDIERATQLARNMVTKWGLSEKLGPLHYGEDESGQPGQGNPVSGKTSAEIDAEVRRIIDDCYSRAKKILEENRDILEAMKDALMEYETLDAEQVD
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: IPRGVLMCGPPGTGKTLLAKAIAGEAKVPFFSISGSDFVEMFVGVGASRVRDMFEQAKKQAPCIIFIDEIDAVGRHRGAGVGGGHDEREQTLNQLLVEMDGFEGNEGVIVIAATNRPDVLDNALLRPGRFDRQVFVGLP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VIVIAATNRPDVLDNALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: VNPQTIARGTPGFSGADLANLVNEAALFAARANKRVVTMDDF
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: LVLWLIIAAVLLMVFQNFKPQSRDEALSYSDFVQDVQSGQVKSVVVDGLVITGEKADGSRFKTIQPQIIDDELTNELVRSNVQFVGRE
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular

phrase: VLMCGPPGTGKTLLAKAIAGEAKVPFFSISGSDFVEMFVGVGASRVRDMFEQAKKQAPCIIFIDEIDAVGRHRGAGVGGGHDEREQTLNQLLVEMDGFEGNEGVIVIAATNRPDVLDNALLRPGRFDRQVFV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core
Protein sequence:
MEQLPLFFQLKGKTVAVAGGGAPAARRAELALRAGARVSAFAPQLGDDFRALVDDPHFVHETRAPSAADMAGLALAFAATGDRATDEAMAALAREARVPINVADTPELCDFIMPAIVDRDPLVIAISTGGASPIFARMIRARLESTIPAAYGRLVALVGSYRERLGQRLSDLSQRRRFWERALEGRVADRFLAGREDEARVELERALDAADDTELAQGEVYLVGAGPGDPDLLTFRALRLMQRADVVLYDRLLPPGILNLVRREAEHIYVGKEPDRHAVPQEEISAKLVRLAKEGKRVLRLKGGDPFMFGRGGEEIEALAAAGIPVQVVPGVTSAAGCSAYAGIPLTHRDHAQACVFVTGHARSGGGLSLGWEALVQPHQTVVIFMGLGQLESLMHQFVAHGGDPALPAAIVENGTRPNQRVVTGTVETIAGAAASEGIVGPALVILGTVVTLRERLVPHGGPVSDEPGIFSNTHIPATMTPV

Annotated regions:
phrase: VYLVGAGPGDPDLLTFRALRLMQRADVVLYDRLLPPGILNLVRREAEHIYVGKEPDRHAVPQEEISAKLVRLAKEGKRVLRLKGGDPFMFGRGGEEIEALAAAGIPVQVVPGVTSAAGCSAYAGIPLTHRDHAQACVFVTGHARSGGGLSLGWEALVQPHQTVVIFMGLGQLESLMHQFVAHGGDPALPAAIVENGTRPNQRVVTGTVET
type: DOMAIN
name: 4pyrrol_Mease
description: Tetrapyrrole methylase

phrase: RDPLVIAISTGGASPIFARMIRARLE
type: DOMAIN
name: Sirohaem_synthase_central
description: Siroheme synthase, central domain

phrase: VGAGPGDPDLLTFRALRLMQRADVVLYDRLLPPGILNLVRREAEHIYVGKEPDRHAVPQEEISAKLVRLAKEGKRVLRLKGGDPFMFGRGGEEIEALAAAGIPVQVVPGVTSAAGCSAYAGIPLTHRDHAQACVFVTGHARSGGGLSLGWEALVQPHQTVVIFMGLGQLESLMHQFVAHGGDPALPAAIVENGTRPNQRVVTGTVETIAGAAASEGIVGPALVILGTV
type: DOMAIN
name: CobA/CysG_C
description: Uroporphyrin-III C-methyltransferase

phrase: LPLFFQLKGKTVAVAGGGAPAARRAELALRAGARVSAFAPQLGDDFRALVDDPHFVHETRAPSAADMAGLALAFAATGDRATDEAMAALAREARVPINVADTPELCDFIMPAIVDRDPLVIAISTGGASPIFARMIRARLESTIPAAYGRLVALVGSYRERLGQRLSDLSQRRRFWERALEGRVADRFLAGREDEARVELERA
type: DOMAIN
name: Sirohaem_synthase_N
description: Sirohaem synthase, N-terminal

phrase: AYGRLVALVGSYRERLGQRLSDLSQRRRFWERALEGRVADRFLAGREDEARVELERA
type: DOMAIN
name: Sirohaem_synthase_dimer_dom
description: Sirohaem synthase, dimerisation domain

phrase: GEVYLVGAGPGDPDLLTFRALRLMQRADVVLYDRLLPPGILNLVRREAEHIYVGKEPDRHAVPQEEISAKLVRLAKEGKRVLRLKGGDPFMFGRGGEEIEALAAAGIPVQVVPGVTSAAGCSAYAGIPLTHRDHAQACVFVTGHARSGGGLSLGWEALVQPHQTVVIFMGLGQLESLMHQFVAHGGDPALPAAIVENGTRPNQRVVTGTVETIAGAAASEGIVGPALVILGTVVTL
type: DOMAIN
name: CobA/CysG_C
description: Uroporphyrin-III C-methyltransferase

phrase: VLRLKGGDPFMFGRGGEEIEALAAAGIPVQVVP
type: CONSERVED_SITE
name: Uropor_MeTrfase_CS
description: Uroporphiryn-III C-methyltransferase, conserved site
Protein sequence:
METVNVNLGKRSYPIYAGPGILQDLGELLGGLPVGRKVLLISNPTVFSLYGEKAAESLARAGFTVAVAEIGDGEEHKTLATAGRLYDRAFEAGLDRRSSIVALGGGVVGDVAGFVAATYMRGISFVQVPTTLLAQVDSSVGGKVAVNHPRGKNIIGAFYQPRLVLADVDTLKTLPVRQMRSGLAEVIKYGVIWSREFFAWLEQNIEALLNGEAGALAYAVRESCRIKAQVVEQDETEQGLRAVLNYGHTVGHAVEALTHYRVYTHGEAVGIGMAVEAGLAVALGMLKRSEGGRIIRLIRQAGLPEGLPEGLPPEKTVEKFYHDKKAVEGQLTFVLPERIGRAVVKNGLAKNFLLEFLSAGYGLLERGAGRV

Annotated regions:
phrase: EIGDGEEHKTLATAGRLYDRAFEAGLDRRSSIVALGGGVVGDVAGFVAATYMRGISFVQVPTTLLAQVDSSVGGKVAVNHPRGKNIIGAFYQPRLVLADVDTLKTLPVRQM
type: DOMAIN
name: DHQS/DOIS_N
description: 3-dehydroquinate synthase, N-terminal domain

phrase: GLAEVIKYGVIWSREFFAWLEQNIEALLNGEAGALAYAVRESCRIKAQVVEQDETEQGLRAVLNYGHTVGHAVEALTHYRVYTHGEAVGIGMAVEAGLAVALGMLKRSEGGRIIRLIRQAGLPEGLPEGLPPEKTVEKFYHDKK
type: DOMAIN
name: DHQS_C
description: 3-dehydroquinate synthase, C-terminal domain
Protein sequence:
MAVKKFKPTSPGIRQMTVASFDEITKTKPEKSLLEPLKKKAGRNNQGKLTVRHQGGGHKRMYRVIDFKRIKDGIPAKVASIEYDPNRTSRIALLHYADGEKRYIIAPNGLNVGDTVVSGPDADIKTGNCLPLKNIPVGTLIHCIEMRPGKGGQLVRSAGAAAQLMAKEGEHATLRLPSGEMRKVLAECRATIGQMGNLEHENITIGKAGRKRWLGIRPTVRGVVMNPVDHPHGGGEGRSPIGRKAPVTPWGKVAIGGKTRRKKASDKLIIKRRTK

Annotated regions:
phrase: KTGNCLPLKNIPVGTLIHCIEMRPGKGGQLVRSAGAAAQLMAKEGEHATLRLPSGEMRKVLAECRATIGQMGNLEHENITIGKAGRKRWLGIRPTVRGVVMNPVDHPHGGGEGRSPIGRKAPVTPW
type: DOMAIN
name: Ribosomal_uL2_C
description: Large ribosomal subunit protein uL2, C-terminal

phrase: PTVRGVVMNPV
type: CONSERVED_SITE
name: Ribosomal_uL2_CS
description: Large ribosomal subunit protein uL2, conserved site

phrase: GRNNQGKLTVRHQGGGHKRMYRVIDFKRIKDGIPAKVASIEYDPNRTSRIALLHYADGEKRYIIAPNGLNVGDTVV
type: DOMAIN
name: Ribosomal_uL2_RNA-bd_dom
description: Large ribosomal subunit protein uL2, RNA-binding domain

phrase: IKTGNCLPLKNIPVGTLIHCIEMRPGKGGQLVRSAGAAAQLMAKEGEHATLRLPSGEMRKVLAECRATIGQMGNLEHENITIGKAGRKRWLGIRPTVRGVVMNPVDHPHGGGEGRSPIGRKAPVTPWGK
type: DOMAIN
name: Ribosomal_uL2_C
description: Large ribosomal subunit protein uL2, C-terminal
Protein sequence:
MKTLRQLLEGISYLSSQKGELEVAVTGVSCDTRTLERGNLFVAVSGMDRDGHVFIPDAIRRGAFAIVSERFHPEANHMNLPQFVVSSTRAVLPKIARAAFGDPAQRLKLIGVTGTNGKTTTAFLIQHLLNLKKCTGLIGTIYCDDGQRKGPLTNTTPGPIELNQLFARMVEHGVSVCVMEVSSHALDQERVDGLIFSHTVFTNLTQDHLDYHRDMEHYYQAKRKLFIREPAPERSVVNCDDAYGVRLADELERNRVTSYGFQSHCDIRAEHVVAHLDAVEFDLVQRGERLHAEVPLGLTYNVSNILAAVAVTSEAGISCGEAIRRLQSFPGVPGRMEKIDEGQDFLVYVDYAHTPDALEQVLLSSTKACKNRLVCVFGCGGNRDRGKRPLMGRIAARYCALVILTSDNPRNEDPMEICQEMRQGINQERCRPEIVVEVDRERAIRRAITEARRGDLVFIFGKGHEDVQIIGDRKLPFRDQDIARSYSKRRCLPFKISPEFAAER

Annotated regions:
phrase: VTGTNGKTTTAFLIQHLLNLKKCTGLIGTIYCDDGQRKGPLTNTTPGPIELNQLFARMVEHGVSVCVMEVSSHALDQERVDGLIFSHTVFTNLTQDHLDYHRDMEHYYQAKRKLFIREPAPERSVVNCDDAYGVRLADELERNRVTSYGFQSHCDIRAEHVVAHLDAVEFDLVQRGERLHAEVPLGLTYNVSNILAAVA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: IGVTGTNGKTTTAFLIQHLLNLK
type: CONSERVED_SITE
name: Folylpolyglutamate_synth_CS
description: Folylpolyglutamate synthetase, conserved site

phrase: GRMEKIDEGQDFLVYVDYAHTPDALEQVLLSSTKACKNRLVCVFGCGGNRDRGKRPLMGRIAARYCALVILTSDNPRNEDPMEICQEMRQGINQERCRPEIVVEVDRERAIRRAITEARRGDLVFIFGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: VTGVSCDTRTLERGNLFVAVSGMDRDGHVFIPDAIRRGAFAIVSERFHPEANHMNLPQFVVSSTRAVLPKIAR
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain
Protein sequence:
MAVNLLKKNSLALVASLLLAGHVQATELLNSSYDVSRELFAALNPPFEQQWAKDNGGDKLTIKQSHAGSSKQALAILQGLKADVVTYNQVTDVQILHDKGKLIPADWQSRLPNNSSPFYSTMGFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARYTYLAAWGAADKADGGDKGKTEQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFESEVNNIRKQYEAQGFEVVIPKTNILAEFPVAWVDKNVQANGTEKAAKAYLNWLYSPQAQTIITDYYYRVNNPEVMDKLKDKFPQTELFRVEDKFGSWPEVMKTHFTSGGELDKLLAAGRN

Annotated regions:
phrase: KDNGGDKLTIKQ
type: CONSERVED_SITE
name: Sulphate/thiosulphate-bd_CS
description: Sulphate/thiosulphate-binding, conserved site

phrase: NPKTSGNA
type: BINDING_SITE
name: Sulphate/thiosulphate_BS
description: Sulphate/thiosulphate-binding site
Protein sequence:
MSKPAADTTHFGSETVVTREKAGRVRGVFDSVAANYDLMNDLMSGGLHRIWKRFTLARTGLRPGDRALDVACGTGDLTVGLCRQVGADGFVWMTDINAVMLAHGRRRLVNAGLVGSVRALQADAERLPFADHQFNCVTIGFGLRNVTDKAAALASMGRVLKPGGRLLVLEFSKPALKFAKPLYEFHLSRVLPMLGRIVARDADSYRYLAESIRMHPDQKALLQMMTDAGLEDSHYYNLSGGVAALHVGYRY

Annotated regions:
phrase: RVLKPGGRLLVLEF
type: CONSERVED_SITE
name: UbiE/COQ5_MeTrFase_CS
description: UbiE/COQ5 methyltransferase, conserved site

phrase: YDLMNDLMSGGLHRI
type: CONSERVED_SITE
name: UbiE/COQ5_MeTrFase_CS
description: UbiE/COQ5 methyltransferase, conserved site
Protein sequence:
MNKYKFNTIEEAIEDIKAGKIIVVVDDEDRENEGDLLMAAEKVTPESINFMARYARGLICMPMTEEKLQELHLHQMVANNTDSKETAFTISIDSVETTTGISAYERALTIKRAVDSSAKAEDFQSPGHIFPLRACKGGVLKRAGHTEAAVDLAKLAGLSPAGAICEIMNEDGTMARVPDLMKYVKEYNLKIITIADLIEYRRRTESLVKKKGTACMPTKYGEFKIVGYEDKLTGKEHIALVKGDVKKGEPVLIRVHSECLTGDVFGSLRCDCGDQLGQALKAINKEGRGILLYMRQEGRGIGLINKIKAYNLQDKGMDTVDANLALGFPEDLRDYGIGAQILKDLGVEKVRLMTNNPKKISGISGYGIEIVERVPIEMECNSKNEFYLRTKKERMGHILNFKNIKKYNKTLKEAE

Annotated regions:
phrase: TACMPTKYGEFKIVGYEDKLTGKEHIALVKGDVKKGEPVLIRVHSECLTGDVFGSLRCDCGDQLGQALKAINKEGRGILLYMRQEGRGIGLINKIKAYNLQDKGMDTVDANLALGFPEDLRDYGIGAQILKDLGVEKVRLMTNNPKKISGISGYGIEIVERV
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MILERVYLIGLSGSGKTTLAPLLAERLGFEAVDIDAEVERHFGRSIPDIFAAFGEPVFRAAERDALAQASRRTRVVVATGGGAVLDPANWASMRPRSAIVHLTAAPSVLIERLEAAVRATPMAERPLLRGDDPLARLESLWQARRHLYEQADLTIDTTGKSLDALAQEIAGQITALDRAGVIPVDSLGTPSGRSDLYAAPGLLAEVGTLARRRWPKARRAWVIADEHVLPLWGAPVEGSFTQAGFDVTMRAVPAGEGSKSFQEASALLDWLLGGGIERGDVVVALGGGVVGDLAGFVAAIVLRGVGLVQLPTSLLAMVDSSVGGKTGVNHTLGKNLIGAFYQPPLVVADPHVLRTLPPRDLRNGWAEIVKHSMIECTATATPEPVLLPWLEGRTPVGGLGEPGELAALIAHNIRLKAAVVRADEREAGLRRILNYGHTLGHAIEAAGYRYLHGEAVALGMRAAARLAHRLGLCDADLVARQDALLDRLDLPRTYDGEWEPVREHLLRDKKVVQGTLTWILPEGPGRVVVRRDVPLEAVEAVAREIGAR

Annotated regions:
phrase: RAAERDALAQASRRTRVVVATGGGA
type: CONSERVED_SITE
name: Shikimate_kinase_CS
description: Shikimate kinase, conserved site

phrase: AVPAGEGSKSFQEASALLDWLLGGGIERGDVVVALGGGVVGDLAGFVAAIVLRGVGLVQLPTSLLAMVDSSVGGKTGVNHTLGKNLIGAFYQPPLVVADPHVLRTLPPRDL
type: DOMAIN
name: DHQS/DOIS_N
description: 3-dehydroquinate synthase, N-terminal domain

phrase: GWAEIVKHSMIECTATATPEPVLLPWLEGRTPVGGLGEPGELAALIAHNIRLKAAVVRADEREAGLRRILNYGHTLGHAIEAAGYRYLHGEAVALGMRAAARLAHRLGLCDADLVARQDALLDRLDLPRTYDGEWEPVREHLLRDKK
type: DOMAIN
name: DHQS_C
description: 3-dehydroquinate synthase, C-terminal domain
Protein sequence:
MMIDFDSVSSVKLCDLDITNNLLTAYNPDPNLVLSGLSEKSHLVGKGFVFFALSGTTTHGAHFTKDAVSRGAGLVISDPEGEKIIQALDLRIPVYIFKKPREILAKASSSFFKAQPSCIVGVTGTNGKTSVSHYVRQVWELLGQSALSIGTTGVNGLIDLPLEHTTPDAIKLHWLLNQMVDQGISKVIIEASSHGLEQCRLDGIRFSVGAFTNLSRDHFDYHGEIEAYFQAKAILFERLISKNGGAVIGIDDKYGTRISKLANVKSTNLVTVGKNKKANIRLVSQNFHSRGQEIKVDWQGKEHIIPLTLFGDFQANNILLALGILSICGEKPERVINLLSRLKAVPGRMEEVAVRKNGARIFVDYAHTPEALKAALRSIRAHFMGQIHLVFGAGGNRDKGKRKMMGQIASDFSDKIIITDDNPRNEDPASIRTEIKKFCPKAIEIGDRAEAILVGVDQLRTGDALIIAGKGHEKTQTFANSILPFDDGEQASYSVAALDGET

Annotated regions:
phrase: VTGTNGKTSVSHYVRQVWELLGQSALSIGTTGVNGLIDLPLEHTTPDAIKLHWLLNQMVDQGISKVIIEASSHGLEQCRLDGIRFSVGAFTNLSRDHFDYHGEIEAYFQAKAILFERLISKNGGAVIGIDDKYGTRISKLANVKSTNLVTVGKNKKANIRLVSQNFHSRGQEIKVDWQGKEHIIPLTLFGDFQANNILLALG
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRMEEVAVRKNGARIFVDYAHTPEALKAALRSIRAHFMGQIHLVFGAGGNRDKGKRKMMGQIASDFSDKIIITDDNPRNEDPASIRTEIKKFCPKAIEIGDRAEAILVGVDQLRTGDALIIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: GLSEKSHLVGKGFVFFALSGTTTHGAHFTKDAVSRGAGLVISDPEGEKIIQALDLRIPVYIFKKPREILAKAS
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain
Protein sequence:
MRIPGPGSFLFLASTLSALLFLLPLAAEGCGPGRGYGRRRPPKKLTPLAYKQFSPNVAEKTLGASGRYEGKITRSSERFKELTPNYNIDIMFKDEENTAADRLMTQRCKDKLNSLAISVMNMWPGVKLRVTEGWDEDGHHSEDSLHYEGRAVDITTSDRDRDKYAMLARLAVEAGFDWVYYESKAHIHCSVKSEHSVAAKTGGCFPGNARVLLEGGATKSLRDVLPGDSVLASSSADGSGELVFSPVLSFLDRRPATVRTFHVIRTAAGLNISLTAAHLIYVSDLNCTKVSLPGTASPAPARPATASSGPGSGGLAGLRTVFASEVRPGQCVLTSRRGAPTLSGVTGVEVRRGRGLYAPLTLHGSVVVDGVLASCYAAVDMPRLAHWALAPLRLSQRLLGASGPQADGLHWYPWVLQRLGRLLLDPGHFHPWGIEG

Annotated regions:
phrase: CFPGNARVLLEGGATKSLRDVLPGDSVLASSSADGSGELVFSPVLSFLDRRPATVRTFHVIRTAAGLNISLTAAHLIY
type: PTM
name: Intein_N
description: Intein N-terminal splicing region

phrase: GGCFPGNARVLLEGGATKSLRDVLPGDSVLASSSADGSGELVFSPVLSFLDRRPATVRTFHVIRTAAGLNISLTAAHLIYVSDLNCTKVSLPGTASPAPARPATASSGPGSGGLAGLRTVFASEVRPGQCVLTS
type: DOMAIN
name: Hint_dom_N
description: Hint domain N-terminal

phrase: CGPGRGYGRRRPPKKLTPLAYKQFSPNVAEKTLGASGRYEGKITRSSERFKELTPNYNIDIMFKDEENTAADRLMTQRCKDKLNSLAISVMNMWPGVKLRVTEGWDEDGHHSEDSLHYEGRAVDITTSDRDRDKYAMLARLAVEAGFDWVYYESKAHIHC
type: DOMAIN
name: Hedgehog_signalling_dom
description: Hedgehog, N-terminal signalling domain

phrase: KSEHSVAAKTGGCFPGNARVLLEGGATKSLRDVLPGDSVLASSSADGSGELVFSPVLSFLDRRPATVRTFHVIRTAAGLNISLTAAHLIYVSDLNCTKVSLPGTASPAPARPATASSGPGSGGLAGLRTVFASEVRPGQCVLTSRRGAPTLSGVTGVEVRRGRGLYAPLTLHGSVVVDGVLASCYAAVDMPRLAHWALAPLRLSQRLLGASGPQADGLHWYPWVLQRLGRLL
type: DOMAIN
name: Hedgehog_Hint
description: Hedgehog protein, Hint domain
Protein sequence:
MSAADLVTVLAEGTFEEQIVEVSAFLSRSQPEASRNDFISKFQQLALDAEPAEPAEPAVSTEATEPASAPDAAKKQQTVQQLVSEIVTLGEGSDRELEGVYNLIFSLISSTDQQTQLVPQLLSAVSKDSAAAATGAGGADKSNVRYRILSNLFNSLEATSALRLQTFNALLSLVAANDDLDYLTSALTALPQWLAQWSVSETEKASCLESVAKALEGAEKEHGQTSKAYQFLVLHLRYISTLPASASTKEAAERTVAAALRLPRLYEFEDLLHVQAVLDLKSASSPIFDLLKIFVGGTTADFSAFASSHSSEFQRLNLSHDDLLHKIRLLDLADLCALRVSADVSYASIAKTLNIEHDQVELWVIDVIRAGLVSGKLSQVNDAFRVYKSTHRQFGKEQWQSLEQRLVQWQNSISSIIESIAATRGGKLPDGAPVAAELATA

Annotated regions:
phrase: KAYQFLVLHLRYISTLPASASTKEAAERTVAAALRLPRLYEFEDLLHVQAVLDLKSASSPIFDLLKIFVGGTTADFSAFASSHSSEFQRLNLSHDDLLHKIRLLDLADLCALRVSADVSYASIAKTLNIEHDQVELWVIDVIRAGLVSGKLSQVNDAFRVYKST
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain

phrase: RQFGKEQWQSLEQRLVQWQNSISSIIES
type: DOMAIN
name: eIF3m_C_helix
description: eIF3 subunit M, C-terminal helix domain

phrase: FQRLNLSHDDLLHKIRLLDLADLCALRVSADVSYASIAKTLNIEHDQVELWVIDVIRAGLVSGKLSQVNDAFR
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain

phrase: LSHDDLLHKIRLLDLADLCALRVSADVSYASIAKTLNIEHDQVELWVIDVIRAGLVSGKLSQVNDAFRVYKSTHRQFGKEQWQSLEQRLVQ
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain
Protein sequence:
MNQWVLASNNKGKLTEFQALFDQANLGVEIISQGSLGIDDAIEDGLSFVENAIIKARHASAASGLPAIADDSGLCVPILGNAPGIYSARYAGTHGDDAANNEKLLADLLPYRGDAPIAGFFVCVLAMVRHADDPLPLIAIGKWQGEILDAPRGEHGFGYDPLFWVNELGKSSAELEKSAKNAISHRGQAMAQLLAQL

Annotated regions:
Protein sequence:
MTTHQFEHPLNEKTRIYLRVEALLNQMERASTFSDGIQHQLFFRSLFDMLEIFEQIQLKSELAKDMEKQRLTYRSWLHVEGVDQEMLNSLLTEVDEVHRDLMSAERFGQSLKEDRFLSAIRQRFNLPGGSCCFDLPALHYWLHLPLDRKMRDAQQWMQTVTPLSNALKLWLKLTRETGHYRSRMASNGFYQSDAEDANILRLAIPLEYGVYPMISGHKNRFAIKFIDFHSGQACTQDIAFDLAVCC

Annotated regions:
Protein sequence:
MNERLNLADLKAKTPADLLAMAEEWEIENAPSMRKGEMMFSILKEHAEEGYEVGGDGVLEVLQDGFGFLRSPEANYLPGPDDIYVSPEILRQFSLRTGDTIEGVIVAPRENERYFSLTRVTKINFDDPERARHKVHFDNLTPLYPDERLKMEVDDPTMKDRSARIIDLVAPIGKGQRGLIVAPPRTGKTVLLQNIAHSIATNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPATRHVAVAEMVIEKAKRLVEHKRDVVILLDSITRLGRAFNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRVFPAMDILKSGTRKEDLLVDKSDLQKTYVLRRILNPMGTTDAIEFLISKLRQTKSNAEFFDSMNT

Annotated regions:
phrase: EVGGDGVLEVLQDGFGFLRSPEANYLPGPDDIYVSPEILRQFSLRTGDTIEGVIVAPRENERYFSLTRVTKINFD
type: DOMAIN
name: Rho_RNA-bd
description: Rho termination factor, RNA-binding domain

phrase: DGVLEVLQDGFGFLRSPEANYLPGPDDIYVSPEILRQFSLRTGDTIEGVIVAPRENERYFSLTRVT
type: DOMAIN
name: CSD
description: Cold-shock domain

phrase: SARIIDLVAPIGKGQRGLIVAPPRTGKTVLLQNIAHSIATNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPATRHVAVAEMVIEKAKRLVEHKRDVVILLDSITRLGRAFNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRVFPAMDILKSGTRKEDLLVDKSDLQKTYVLRRILNPMGTTDAIEFLISKL
type: DOMAIN
name: Rho_factor_ATP-bd
description: Transcription termination factor Rho, ATP binding domain

phrase: DLKAKTPADLLAMAEEWEIENAPSMRKGEMMFSILKEHAEE
type: DOMAIN
name: Rho-like_N
description: Rho termination factor-like, N-terminal

phrase: DGVLEVLQDGFGFLRSPEANYLPGPDDIYVSPEILRQFSLRTGDTIEGVIVAPRENERYFSLTRVTKINFDDP
type: DOMAIN
name: Rho_RNA-bd
description: Rho termination factor, RNA-binding domain

phrase: RIIDLVAPIGKGQRGLIVAPPRTGKTVLLQNIAHSIATNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPATRHVAVAEMVIEKAKRLVEHKRDVVILLDSITRLGRAFNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRVFPAMDILK
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_nucl-bd
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain

phrase: GDGVLEVLQDGFGFLRSPEANYLPGPDDIYVSPEILRQFSLRTGDTIEGVIVAPRENERYFSLTR
type: DOMAIN
name: Rho_RNA-bd
description: Rho termination factor, RNA-binding domain

phrase: DLKAKTPADLLAMAEEWEIENAPSMRKGEMMFSILKEHAEEG
type: DOMAIN
name: Rho-like_N
description: Rho termination factor-like, N-terminal

phrase: KGQRGLIVAPPRTGKTVLLQNIAHSIATNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPATRHVAVAEMVIEKAKRLVEHKRDVVILLDSITRLGRAFNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRV
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain
Protein sequence:
MKLSDILGDIEYEVVWGDIEVPIDCISYHSDKMKQDSLFVCVEGSKHDGHDYIAQAVMKGCRAIIVEKKVALEFIPEGCTVVQVKGTRKLLPFIASRFYDNPSESFNLVGVTGTNGKTSVTHMISFILSYAGRHVGSIGTLGDQMNQEVIDTTRTTPTTPEAFDLQQVFGHMRDRGVTDVVMEVSSMGLELHRVDSCDFTVGIFTNLSPEHLDDHVTFERYKEAKLKLFSLAPQSIINADDANAEDFIQASKGDCQTYGIDNLDADWVAKDVSVQVNGVTFTLVGHDVHTEVTVPIPGRFTVYNALAAISTCLSLDVPLQTILAALKEIKGPDGRLQTIQSPDGYTIMVDYAHTPDALDNVLSNLKPYTAGKLILVFGCGGDRDEAKRPRMGEIASKWCDHIILTSDNPRTEDPMSIIKDIEKGIGMIKEYDIIEDRKKAIQYAMKNAEKEDIILIAGKGNETYQIVGEEKLPFSDVQVVKENM

Annotated regions:
phrase: VTGTNGKTSVTHMISFILSYAGRHVGSIGTLGDQMNQEVIDTTRTTPTTPEAFDLQQVFGHMRDRGVTDVVMEVSSMGLELHRVDSCDFTVGIFTNLSPEHLDDHVTFERYKEAKLKLFSLAPQSIINADDANAEDFIQASKGDCQTYGIDNLDADWVAKDVSVQVNGVTFTLVGHDVHTEVTVPIPGRFTVYNALAAIS
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: VGVTGTNGKTSVTHMISFILSYA
type: CONSERVED_SITE
name: Folylpolyglutamate_synth_CS
description: Folylpolyglutamate synthetase, conserved site

phrase: IDCISYHSDKMKQDSLFVCVEGSKHDGHDYIAQAVMKGCRAIIVEKKVALEFIPEGCTVVQVKGTRKLLPFIASRF
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: GRLQTIQSPDGYTIMVDYAHTPDALDNVLSNLKPYTAGKLILVFGCGGDRDEAKRPRMGEIASKWCDHIILTSDNPRTEDPMSIIKDIEKGIGMIKEYDIIEDRKKAIQYAMKNAEKEDIILIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MNPLKKKPRSKNLNPTVPLPDWMKVRVSFPTDSDALSVVRAEVESKELHTVCESASCPNLNHCWNRKTATYMLAGDICTRRCQYCDVAFGKPKPLDSLEPERVARSVQSLGLRHVVLTAVNRDDLKDGGASHFAETITKIKTYHKDCTIEVLIPDFKAKEDSLQILYAAKPNIINHNIETVESLFPTITPQKNYKRSLEVLAHIANHGFLTKSGIILGLGETDEDVNQCLMDLFAHGVRMLTIGQYLQPGPTHYPVQSFVRPETFVMWKETAYKIGFKTVASGPLVRSSYHADEYFHEESQILPTE

Annotated regions:
phrase: WNRKTATYMLAGDICTRRCQYCDVAFGKPKPLDSLEPERVARSVQSLGLRHVVLTAVNRDDLKDGGASHFAETITKIKTYHKDCTIEVLIPDFKAKEDSLQILYAAKPNIINHNIETVESLFPTITPQKNYKRSLEVLAHIANHGFLTKSGIILGLGETDEDVNQCLMDLFAHGVRMLTIGQYLQPGPTHYPVQSFVRPETFVMWKETAYKIGF
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: GDICTRRCQYCDVAFGKPKPLDSLEPERVARSVQSLGLRHVVLTAVNRDDLKDGGASHFAETITKIKTYHKDCTIEVLIPDFKAKEDSLQILYAAKPNIINHNIETVESLFPTITPQKNYKRSLEVLAHIANHGFLTKSGIILGLGETDEDVNQ
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TATYMLAGDICTRRCQYCDVAFGKPKPLDSLEPERVARSVQSLGLRHVVLTAVNRDDLKDGGASHFAETITKIKTYHKDCTIEVLIPDFKAKEDSLQILYAAKPNIINHNIETVESLFPTITPQKNYKRSLEVLAHIANHGFLTKSGIILGLGETDEDVNQCLMDLFAHGVRMLTIGQYLQPGPTHYPVQSFVRPETFVMWKETA
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain