nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MASRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGTNIVVLGVEKKSVAKLQDERTVRKICALDDHVCMAFAGLTADARVVISRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAISNDKEAIKLAIKALLEVVQSGGKNIELAIIRRDQPLKMFSAKEIELEVSEIEREKDEAEKTKSKKST

Annotated regions:
phrase: YDRAITVFSPDGHLFQVEYAQE
type: DOMAIN
name: Proteasome_asu_N
description: Proteasome alpha-subunit, N-terminal domain

phrase: YDRAITVFSPDGHLFQVEYAQE
type: DOMAIN
name: Proteasome_asu_N
description: Proteasome alpha-subunit, N-terminal domain

phrase: YDRAITVFSPDGHLFQVEYAQE
type: DOMAIN
name: Proteasome_asu_N
description: Proteasome alpha-subunit, N-terminal domain
Protein sequence:
MEYQGQQHGRVDEYGNPVAGHGVGTGMGTHGGVGTGAAAGGHYQPMRDEHQTGRGILHRSGSSSSSSSEDDGMGGRRKKGIKEKIKEKLPGGHGDQQHNAGTYGYGQQGTGMAGTGGTYGQQGHTGMTGMGATDGTYGQQGHTGMAGTGAHGTAATGGTYGQQGHTGMTGTGMHGTGGTYGQQGHTGMTGTGMHGTGGTYGQHGTDTGEKKGIMDKIKEKLPGQH

Annotated regions:
phrase: KIKEKLP
type: CONSERVED_SITE
name: Dehydrin_CS
description: Dehydrin, conserved site

phrase: SSSSSEDDGMGGRRK
type: CONSERVED_SITE
name: Dehydrin_CS
description: Dehydrin, conserved site
Protein sequence:
MKEEIAATVVFLTMLVKKHKQLSKQKIEKFAAKLTTILFAKYKNHWYAENPMKGQAFRCIRINTYQAIDAVFEKACAESNVDFNDLGLPKEMTIWVDPFEVCCRYGEKNDPFTIASFKGKDGYNAPKRISHAVEKATSDYYSGTSSDEELTNKEPKTIPKVSNPNSIYQCADYSQAIPSWSQYPRRKNYQNNGYPPNPPMPYYPQQKAYKAFRQSSAFSGPRVDRYHWVNMKRSAIS

Annotated regions:
phrase: MKEEIAATVVFLTMLVKKHKQLSKQKIEKFAAKLTTILFAKYKNHWYAENPMKGQAFRCIRINTYQAIDAVFEKACAESNVDFNDLGLPKEMTIWVDPFEVCCRYGE
type: DOMAIN
name: Anti_prolifrtn
description: Anti-proliferative protein

phrase: AATVVFLTMLVKKHKQLSKQKIEK
type: DOMAIN
name: Anti_prolifrtn
description: Anti-proliferative protein

phrase: AAKLTTILFAKYKNHWYAENPMKGQAFRC
type: DOMAIN
name: Anti_prolifrtn
description: Anti-proliferative protein

phrase: EMTIWVDPFEVCCRYGEKNDPFTIASFKG
type: DOMAIN
name: Anti_prolifrtn
description: Anti-proliferative protein

phrase: YKNHWYAENPMKGQAFRCIR
type: DOMAIN
name: Anti_prolifrtn
description: Anti-proliferative protein

phrase: LPKEMTIWVDPFEVCCRYG
type: DOMAIN
name: Anti_prolifrtn
description: Anti-proliferative protein

phrase: MKEEIAATVVFLTMLVKKHKQLSKQKIEKFAAKLTTILFAKYKNHWYAENPMKGQAFRCIRINTYQAIDAVFEKACAESNVDFNDLGLPKEMTIWVDPFEVCCRYGEKNDPF
type: DOMAIN
name: Anti_prolifrtn
description: Anti-proliferative protein
Protein sequence:
MRDETPEQPAPLRFGYTTGSCASATSLAAARLLLTGVASDTVDIVLPKGQHVAMRLAFCRATDDGGAEAGTIKDAGDDPDVTHGALVFARVRLVHEPGVRFRAGPGVGTVTRAGLPIAVGEPAINPVPRRMMTEHLAALAAEHGYAGGFDVAIGVENGEALARKTMNPRLGIVGGLSILGTTGIVRPFSCSAYIASIHQGIDVARANGVTHIAACTGNASEDAVRARYGLPDIALIEMGDFAGAVLKYLRRASVARLTLCGGFGKLSKLAAGHLDLHSRHSSIDLPLLAEWAGEAGASAVLQHEIRAANTSQQALALALAHHVPLGDVVCAHARRVARDIVPGEVDVETLAIDREGRIVGVAP

Annotated regions:
Protein sequence:
MAAGAGAGSAPRWLRALSEPLSAAQLRRLEEHRYSAAGVSLLEPPLQLYWTWLLQWIPLWMAPNSITLLGLAVNVVTTLVLISYCPTATEEAPYWTYLLCALGLFIYQSLDAIDGKQARRTNSCSPLGELFDHGCDSLSTVFMAVGASIAARLGTYPDWFFFCSFIGMFVFYCAHWQTYVSGMLRFGKVDVTEIQIALVIVFVLSAFGGATMWDYTIPILEIKLKILPVLGFLGGVIFSCSNYFHVILHGGVGKNGSTIAGTSVLSPGLHIGLIIILAIMIYKKSATDVFEKHPCLYILMFGCVFAKVSQKLVVAHMTKSELYLQDTVFLGPGLLFLDQYFNNFIDEYVVLWMAMVISSFDMVIYFSALCLQISRHLHLNIFKTACHQAPEQVQVLSSKSHQNNMD

Annotated regions:
phrase: DGKQARRTNSCSPLGELFDHGC
type: CONSERVED_SITE
name: CDP_ALCOHOL_P_TRANSF_CS
description: CDP-alcohol phosphatidyltransferase, conserved site
Protein sequence:
MRTAALVVAAGKGLRAGQPVPKQFARWRGKPVVRHSVEALAAAGCAPILVVIPDGAQAVAREALAGIAGVQFTTGGATRQESVRLGLEVLAGAEPDRVLIHDAARPLLPAEVIERLLIALDAYKGAIPVLPVADSLTHAAGDLMGAPARREDLRRVQTPQAFHFAEVLAAHRDWDGPTNAGDDAQVAQAWGMDVALVEGDETLHKLTYAADFGASKPLVRVGSGYDVHRLEEGEELWLCGVRIAHTHGLSGHSDADVAIHALVDAMLGAIGAGDIGQHFPPSDPQWKGAASDRFLAHAGKLVADEGYALANADVTIICEAPKIGPHREAMRERLADILGVDIAAISVKATTTEKLGFTGRREGIAAQAVVSLGLV

Annotated regions:
phrase: VRVGSGYDVHRLEEGEELWLCGVRIAHTHGLSGHSDADVAIHALVDAMLGAIGAGDIGQHFPPSDPQWKGAASDRFLAHAGKLVADEGYALANADVTIICEAPKIGPHREAMRERLADILGVDIAAISVKATTTEKLGFTGRREGIAAQAVVSLG
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: VLIHDAA
type: CONSERVED_SITE
name: ISPD_synthase_CS
description: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site

phrase: RVGSGYDVHRLEEGEELWLCGVRIAHTHGLSGHSDADVAIHALVDAMLGAIGAGDIGQHFPPSDPQWKGAASDRFLAHAGKLVADEGYALANADVTIICEAPKIGPHREAMRERLADILGVDIAAISVKATTTEKLGFTGRREGIAAQAVVS
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: SKPLVRVGSGYDVHRLEEGEELWLCGVRIAHTHGLSGHSDADVAIHALVDAMLGAIGAGDIGQHFPPSDPQWKGAASDRFLAHAGKLVADEGYALANADVTIICEAPKIGPHREAMRERLADILGVDIAAISVKATTTEKLGFTGRREGIAAQAVVS
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: VRVGSGYDVHRLEEGEELWLCGVRIAHTHGLSGHSDADVAIHALVDAMLGAIGAGDIGQHFPPSDPQWKGAASDRFLAHAGKLVADEGYALANADVTIICEAPKIGPHREAMRERLADILGVDIAAISVKATTTEKLGFTGRREGIAAQAVVS
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RVGSGYDVHRLEEGEELWLCGVRIAHTHGLSGHSDADVAIHALVDAMLGAIGAGDIGQHFPPSDPQWKGAASDRFLAHAGKLVADEGYALANADVTIICEAPKIGPHREAMRERLADILGVDIAAISVKATTTEKLGFTGRREGIAAQAVVS
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: SDADVAIHALVDAML
type: CONSERVED_SITE
name: MECDP_synthase_CS
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site
Protein sequence:
MKFLLLFLVVLPIMGVLGKKNGYAVDSSGKAPECLLSNYCYNECTKVHYADKGYCCLLSCYCFGLNDDKKVLEISDTRKSYCDTPIIN

Annotated regions:
phrase: KNGYAVDSSGKAPECLLSNYCYNECTKVHYADKGYCCLLSCYCFGLNDDKKVLEISDTRKSYC
type: DOMAIN
name: LCN-type_CS_alpha_beta_dom
description: LCN-type cysteine-stabilized alpha/beta (CS-alpha/beta) domain

phrase: KKNGYAVDSSGKAPECLLSNYCYNECTKVHYADKGYCCLLSCYCFGL
type: DOMAIN
name: Scorpion_toxin-like
description: Knottin, scorpion toxin-like
Protein sequence:
MGFFDDKQDFLEETFAKYPPEGRRAAIMPLLRRVQQEEGWIRPERIEEIARLVGTTPTEVMGVASFYSYYQFVPTGKYHLQVCATLSCKLAGAEELWDYLTETLGIGPGEVTPDGLFSVQKVECLGSCHTAPVIQVNDEPYVECVTRARLEALLAGLRAGKRLEEIELPGKCGHHVHEVEV

Annotated regions:
phrase: KYHLQVCATLSCKLAGAEELWDYLTETLGIGPGEVTPDGLFSVQKVECLGSCHTAPVIQVNDEPYVECVTRARLEALLAG
type: DOMAIN
name: NuoE_dom
description: NuoE domain
Protein sequence:
MGGKWSKSSIVGWPQVRERIKQTPPAAEGVGAVSKDLDKHGAITSSNMNNADCAWLEAQEEEEVGFPVRPQVPLRPMTYKAAFDLSFFLKEKGGLDGLIYSKKRQEILDLWVHNTQGFFPDWQNYTPGPGVRYPLCFGWCFKLVPVDPQEIEEDNKGENNCLLHPMSQHGIDDEEKEVLRWKFDSGLARRHIARETHPQFYKDC

Annotated regions:
Protein sequence:
MLIPKRVKYRRQHRPTRSGISKGGNRVTFGEYGIQALEPAYITNRQIESARIAINRHVKRGGKVWINIFPDRPLTQKPLGVRMGSGKGPVEKWVANIKPGRILFEMSYPDEATALEALRRAGQKLPCKVRIVKREDQL

Annotated regions:
phrase: GNRVTFGEYGIQALEPAYITNRQIESARIAINRHVKRGGKVWINIFPDRPLTQKPLGVRMGSGKGPVEKWVANIKPGRILFEMSYPDEATALEALRRAGQKLPCKVRI
type: DOMAIN
name: Ribosomal_uL16_dom
description: Large ribosomal subunit protein uL16 domain

phrase: RMGSGKGPVEK
type: CONSERVED_SITE
name: Ribosomal_uL16_CS
description: Large ribosomal subunit protein uL16, conserved site

phrase: KRGGKVWINIF
type: CONSERVED_SITE
name: Ribosomal_uL16_CS
description: Large ribosomal subunit protein uL16, conserved site
Protein sequence:
MEKVPITIRGFAALEQELKHRQQVERPRIIQAIAEARALGDLSENAEYHAAKEAQSLNEGRVLELESLISRAEVIDVAKLSGSKVKFGATVQLIDEDTEEEKTYQIVGEPEADVRSGRVSITSPVARALIGKGVGDTVEVSTPGGGKSYEIVGISFSG

Annotated regions:
phrase: SITSPVARALIGKGVG
type: CONSERVED_SITE
name: TF_GreA/GreB_CS
description: Transcription elongation factor, GreA/GreB, conserved site

phrase: VPITIRGFAALEQELKHRQQVERPRIIQAIAEARALGDLSENAEYHAAKEAQSLNEGRVLELESLISRAE
type: DOMAIN
name: Tscrpt_elong_fac_GreA/B_N
description: Transcription elongation factor, GreA/GreB, N-terminal

phrase: SKVKFGATVQLIDEDTEEEKTYQIVGEPEADVRSGRVSITSPVARALIGKGVGDTVEVSTPGGGKSYEIVGI
type: DOMAIN
name: Tscrpt_elong_fac_GreA/B_C
description: Transcription elongation factor, GreA/GreB, C-terminal

phrase: ELKHRQQVERPRIIQAIAEARALGDLSENAE
type: CONSERVED_SITE
name: TF_GreA/GreB_CS
description: Transcription elongation factor, GreA/GreB, conserved site
Protein sequence:
MTLLNYLHCNRSKSFLFQRFYSPYRIAHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGLEMNLEGKVAV

Annotated regions:
phrase: DMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCC
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: NQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTA
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: DMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVE
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: HGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWI
type: REPEAT
name: E_motif
description: E motif

phrase: NQFVWTSIISAYSSHGDFETVMNLFHKMIKENVA
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: CPVVSSALLDMYAKRGNIDESEKVFNEMSQ
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: HYSCMVDMLGRAGRLKEAEELMS
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: SALLDMYAKRGNIDESEKVFNEMSQ
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: ISWNAMISGFAQNGFSHEALKM
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: NILMSRYSKCGVLEAVKSVFHQMSERN
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: NSFITMYSRSGSFRGARRVFDEM
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: ALLDMYAKRGNIDESEKVFNEMSQ
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: NILMSRYSKCGVLEAVKSVFHQMSERNV
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: ISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVEL
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: ISWNAMISGFAQNGFSHEALKM
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: VWTSIISAYSSHGDFETVMNLFHKMIKENVAP
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: VTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLE
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat
Protein sequence:
MERRAGSRLRAWMLLLLLCPVQGRQKDSGSKWKVFLDQINRALENYEPCSSQNCSCYHGVIEEDLTPFRGGISRKMMAEVVRRKLGTHYQIIKNRLFREDDCMFPSRCSGVEHFILEVIHRLPDMEMVINVRDYPQVPKWMEPTIPVFSFSKTSEYHDIMYPAWTFWEGGPAVWPLYPTGLGRWDLFREDLLRSAAQWPWEKKNSTAYFRGSRTSPERDPLILLSRKNPKLVDAEYTKNQAWKSMKDTLGKPAAKDVHLIDHCKYRYLFNFRGVAASFRFKHLFLCGSLVFHVGDEWVEFFYPQLKPWVHYIPVKTDLSNVQELLQFVKANDDIAQEIAKRGSQFIINHLQMDDITCYWENLLTDYSKFLSYNVTRRKDYYQIVPRRLKTEL

Annotated regions:
phrase: SSQNCSCYHGVIEEDLTPFRGGISRKMMAEVVRRKLGTHYQIIKNRLFREDDCMFPSRCSGVEHFILEVIHRLPDMEMVINVRDYPQVPKWMEPTIPVFSFSKTSEYHDIMYPAWTFWEGGPAVWPLYPTGLGRWDLFREDLLRSAAQWPWEKKNSTAYFRGSRTSPERDPLILLSRKNPKLVDAEYTKNQAWKSMKDTLGKPAAKDVHLIDHCKYRYLFNFRGVAASFRFKHLFLCGSLVFHVGDEWVEFFYPQLKPWVHYIPVKTDLSNVQELLQFVKANDDIAQEIAKRGSQFIINHLQMDDITCYWENLLTDYSKFLSYNVTRRKDYYQIVPRR
type: DOMAIN
name: CAP10
description: Glycosyl transferase CAP10 domain

phrase: RLPDMEMVINVRDYPQVPKWMEPTIPVFSFSKTSEYHDIMYPAWTFWEGGPAVWPLYPTGLGRWDLFREDLLRSAAQWPWEKKNSTAYFRGSRTSPERDPLILLSRKNPKLVDAEYTKNQAWKSMKDTLGKPAAKDVHLIDHCKYRYLFNFRGVAASFRFKHLFLCGSLVFHVGDEWVEFFYPQLKPWVHYIPVKTDLSNVQELLQFVKANDDIAQEIAKRGSQFIINHLQMDDITCYWENLLTDYSKFLSY
type: DOMAIN
name: CAP10
description: Glycosyl transferase CAP10 domain
Protein sequence:
MSHVVVKNDPELDQQLANLDLNSEKQSGGASTASKGRYIPPHLRNREASKGFHDKDSSGWSCSKDKDAYSSFGSRDSRGKSGYFSERGSGSRGRFDDRGRSDYDGIGNRDRPGFGRFERSGHSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDLLGATGRDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLLVEAKQEVPSWLENMAYEHHYKGGSRGRSKRFSGGFGARDYRQSSGSSSSGFGASRGSSSRSGGSGYGNSRGFGGGGYGGFYNSDGYGGNYNSQGVDWWGN

Annotated regions:
phrase: RYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQ
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: NITQKVVWVEDLDKRSFLLDLLGATGRDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLLVEAKQEVPSWLENM
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: TPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQ
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: ENFSDIDMGEIIMGNIELTRYTRPTPVQ
type: DOMAIN
name: RNA_helicase_DEAD_Q_motif
description: RNA helicase, DEAD-box type, Q motif

phrase: VLDEADRM
type: CONSERVED_SITE
name: RNA-helicase_DEAD-box_CS
description: ATP-dependent RNA helicase DEAD-box, conserved site

phrase: KRSFLLDLLGATGRDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRV
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: IPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIF
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: DSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRV
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like
Protein sequence:
MARILLLFLPGLVAVCAVHGIFMDRLASKKLCADDECVYTISLASAQEDYNAPDCRFINVKKGQQIYVYSKLVKENGAGEFWAGSVYGDGQDEMGVVGYFPRNLVKEQRVYQEATKEVPTTDIDFFCE

Annotated regions:
phrase: YTISLASAQEDYNAPDCRFINVKKGQQIYVYSKLVKENGAGEFWAGSVYGDGQDEMGVVGYFPRNLVKEQR
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: EDYNAPDCRFINVKKGQQIYVYSKLVKENGAGEFWAGSVYGDGQDEMGVVGYFPRNLVKE
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: LCADDECVYTISLASAQEDYNAPDCRFINVKKGQQIYVYSKLVKENGAGEFWAGSVYGDGQDEMGVVGYFPRNLVKEQRVY
type: DOMAIN
name: Otoraplin_SH3
description: Otoraplin, SH3 domain

phrase: SLASAQEDYNAPDCRFINVKKGQQIYVYSKLVKENGAGEFWAGSVYGDGQDEMGVVGYFPRNLVKEQ
type: DOMAIN
name: SH3_domain
description: SH3 domain
Protein sequence:
MNDETLREQTTAESEETSPTTPSPEPEVVETLPLIPLEGAVVFPYIVVSLTLDELGSASAEAAAREGRQVLLAARRPDAPADAPITDQLFNVGVVARIEQLGTLPNGASGVVVRGLVRAVLGEAVQTTPYLRFRFTRRPDVFERTPELEQLMVEVHAAIDAVLELRPGVTQEIRNFVRSIDDPGHLADNTGYSPDYTFAERQELLETFDVSERLRKVLMFYRKQFALLEVQAKLRQEVQESAARQQREFYLRQQLRAIQKELGEDTSEAAELDDLRQKLAAADLPEVARKEADRELSRLARINASSPEYQMVRTYLEWLAELPWNKYTGQPIDIAFARQVLDEDHHGLQKVKERILEYLAVKQRRAALGEENLRANREPILAFVGPPGVGKTSLGQSIARALGRSFVRMSLGGVRDEAELRGFRRTYIGSQPGRIIQELRRAGTADPVILLDEIDKLGIDYRGDPAAALLEVLDPEQNHTFTDHYLNLPFDLSRVLFLATANTWDTVPPALRDRMEVIELSGYIEDEKVQIAQIHLVPRQLRANGLRPEEAVVTEDAIRCIINEYTREAGVRNLERSIGAVLRKVARRLSEGEIDPANTPFVVDAAFVRAALGRPRFTNETRERIDQPGVAIGLVWTPVGGDIIFVEASAVEGKKELTITGQLGEVMRESAEAALTYVRSRARSLGIEPDFFETHAIHIHVPAGAVPKDGPSAGITMATALASAATGRLVRDDIAMTGEISLRGRVLPIGGIKEKALGAHRAGIRTVILPRRNLIDLDDLPPAVSAEMTFIPVDTLDEVLSIALLPPATTTDTLTVAQRSDVLTPAS

Annotated regions:
phrase: LPLIPLEGAVVFPYIVVSLTLDELGSASAEAAAREGRQVLLAARRPDAPADAPITDQLFNVGVVARIEQLGTLPNGASGVVVRGLVRAVLGEAVQTTPYLRFRFTRRPDVFERTPELEQLMVEVHAAIDAVLELRPGVTQEIRNFVRSIDDPGHLADNTGYSPDYTFAERQELLETFDVSERLRKVLMFYRKQ
type: DOMAIN
name: Lon_prtase_N
description: Lon protease, N-terminal domain

phrase: REPILAFVGPPGVGKTSLGQSIARALGRSFVRMSLGGVRDEAELRGFRRTYIGSQPGRIIQELRRAGTADPVILLDEIDKLGIDYRGDPAAALLEVLDPEQNHTFTDHYLNLPFDLSRVLFLATANTWDTVPPALRDRMEVIELS
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: DGPSAGIT
type: ACTIVE_SITE
name: Peptidase_S16_AS
description: Peptidase S16, active site

phrase: IDQPGVAIGLVWTPVGGDIIFVEASAVEGKKELTITGQLGEVMRESAEAALTYVRSRARSLGIEPDFFETHAIHIHVPAGAVPKDGPSAGITMATALASAATGRLVRDDIAMTGEISLRGRVLPIGGIKEKALGAHRAGIRTVILPRRNLIDLDDLPPAVSAEMTFIPVDTLDEVLSIALL
type: DOMAIN
name: Lon_proteolytic
description: Peptidase S16, Lon proteolytic domain

phrase: TLPLIPLEGAVVFPYIVVSLTLDELGSASAEAAAREGRQVLLAARRPDAPADAPITDQLFNVGVVARIEQLGTLPNGASGVVVRGLVRAVLGEAVQTTPYLRFRFTRRPDVFERTPELEQLMVEVHAAIDAVLELRPGVTQEIRNFVRSIDDPGHLADNTGYSPDYTFAERQELLETFDVSERLRKVLM
type: DOMAIN
name: Lon_prtase_N
description: Lon protease, N-terminal domain

phrase: VDAAFVRAALGRPRFTNETRERIDQPGVAIGLVWTPVGGDIIFVEASAVEGKKELTITGQLGEVMRESAEAALTYVRSRARSLGIEPDFFETHAIHIHVPAGAVPKDGPSAGITMATALASAATGRLVRDDIAMTGEISLRGRVLPIGGIKEKALGAHRAGIRTVILPRRNLIDLDDLPPAVSAEMTFIPVDTLDEVLSIA
type: DOMAIN
name: Lon_proteolytic
description: Peptidase S16, Lon proteolytic domain

phrase: ANGLRPEEAVVTEDAIRCIINEYTREAGVRNLERSIGAVLRKVARRLSEG
type: DOMAIN
name: Lon_lid
description: Lon protease, AAA+ ATPase lid domain

phrase: AFVGPPGVGKTSLGQSIARALGRSFVRMSLGGVRDEAELRGFRRTYIGSQPGRIIQELRRAGTADPVILLDEIDKLGIDYRGDPAAALLEVLDPEQNHTFTDHYLNLPFDLSRVLFLATANTWDTVPPALRDRMEVIE
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: TLPLIPLEGAVVFPYIVVSLTLDELGSASAEAAAREGRQVLLAARRPDAPADAPITDQLFNVGVVARIEQLGTLPNGASGVVVRGLVRAVLGEAVQTTPYLRFRFTRRPDVFERTPELEQLMVEVHAAIDAVLELRPGVTQEIRNFVRSIDDPGHLADNTGYSPDYTFAERQELLETFDVSERLRKVLMFYR
type: DOMAIN
name: Lon_prtase_N
description: Lon protease, N-terminal domain
Protein sequence:
MPTTVSEEIAGYQLTLETGELAKQANGAVKVQYGNTVVLVTATASKEPKDDLNFFPLTVDYEERLYAVGKIPGGFIKREGKPTEKATLTARLTDRPIRPLFPDGFRNPVHIVSTVLSVDQNCPPEIASIIGASAALSISDIPFDGPIASVKVGKVNDEIVVTPDVDEHEESQLDLVVAGTKDAIMMVEAEANELPEDEMLEAIMKAHEEIKKIITMQEQLVEQVGQKKMEVELDLPSDELVSEVEELALEDIEKVLQIKDKLEREDAMDEAKQKVVDHLLEKYNSEENEDEEEELKEKHIKSAFDSILKREMRSRIIHENSRPDGRGQKEIRPVTCDVDLLPNTHGSGLFTRGQTQVLNVCTLGALGDVQILDGLDIEESKRYMHHYNFPPYSVGEAGFMKGPGRREIGHGALAERALKPMIPTEKDFPYTIRLVSEVLESNGSTSMGSVCASSLSLMDAGVPIEKAVSGIAMGLIKEGDQLAILSDIQGIEDFLGDMDFKVAGTEDGITALQMDIKISGTTREILKQALKQGKDGYLHILNIMKQTISEPREELSPLAPRVIKKQIDPDKIRNVIGPGGKMINKIIDETGVKIDIEPDGLIYISSSDAEQAEQAIKAIDELIKEPEVGEVYLGKVVRTEKYGAFVEILPGKEGLVHISELAEDRVGKTEDVAKVGDEILVKIINIDERGRINLSRKQALGEEDGKTNNDDKKSTKKT

Annotated regions:
phrase: QIDPDKIRNVIGPGGKMINKIIDETGVKIDIEPDGLIYISSSDAEQAEQAIKAI
type: DOMAIN
name: KH_dom_type_1
description: K Homology domain, type 1

phrase: EVGEVYLGKVVRTEKYGAFVEILPGKEGLVHISELAEDRVGKTEDVAKVGDEILVKIINIDERGRINLSR
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: EIRPVTCDVDLLPNTHGSGLFTRGQTQVLNVCTLGALGDVQILDGLDIEESKRYMHHYNFPPYSVGEAGFMKGPGRREIGHGALAERALKPMIPTEKDFPYTIRLVSEVLESNGSTSMGSVCASSLSLMDAGV
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1

phrase: QLTLETGELAKQANGAVKVQYGNTVVLVTATASKEPKDDLNFFPLTVDYEERLYAVGKIPGGFIKREGKPTEKATLTARLTDRPIRPLFPDGFRNPVHIVSTVLSVDQNCPPEIASIIGASAALSISDI
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1

phrase: AVSGIAMGLIKEGDQLAILSDIQGIEDFLGDMDFKVAGTEDGITALQMDIKISGTTREILKQALKQGK
type: DOMAIN
name: ExoRNase_PH_dom2
description: Exoribonuclease, phosphorolytic domain 2

phrase: GPIASVKVGKVNDEIVVTPDVDEHEESQLDLVVAGTKDAIMMVEAEANELPEDEMLEAIMKAH
type: DOMAIN
name: ExoRNase_PH_dom2
description: Exoribonuclease, phosphorolytic domain 2

phrase: GEVYLGKVVRTEKYGAFVEILPGKEGLVHISELAEDRVGKTEDVAKVGDEILVKIINIDERGRINLSR
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: APRVIKKQIDPDKIRNVIGPGGKMINKIIDETGVKIDIEPDGLIYISSSDAEQAEQAIKAIDELI
type: DOMAIN
name: KH_dom
description: K Homology domain

phrase: ELVSEVEELALEDIEKVLQIKDKLEREDAMDEAKQKVVDHLLEKYNSEENEDEEEELKEKHIKSAFDSILKREMRSRIIHENSRPDG
type: DOMAIN
name: PNPase_PH_RNA-bd_bac/org-type
description: Polyribonucleotide nucleotidyltransferase, RNA-binding domain

phrase: EPEVGEVYLGKVVRTEKYGAFVEILPGKEGLVHISELAEDRVGKTEDVAKVGDEILVKIINIDERGRINLSR
type: DOMAIN
name: S1_domain
description: S1 domain
Protein sequence:
MRIIVMGTPDFAVPSLQAIAAMGNGFDIVLVVTGQDKPRKSKHAAAEASPIKQAALALNLPVHEVDDVNDPHFAEIVAAYKPDVIVVAAFRILPPAVYSQARLGAFNLHASLLPAYRGAAPVNWAIMNGEEETGVTTFFLQQRVDTGTIIMQQKTAIAPEENATELIVRLANIGADVVVETLRRIAAKNAATAPQDDSLASRAPKLTRINTRINWEQPVATLHNFIRGLALKPSAWTTFNDKTLKIFRTTLSTPEHDHPSAPAGSLLVSHGKLYVHGSDGWLELLALQLEGRKPMEAADFARGLHVEGEALRLV

Annotated regions:
phrase: MRIIVMGTPDFAVPSLQAIAAMGNGFDIVLVVTGQDKPRKSKHAAAEASPIKQAALALNLPVHEVDDVNDPHFAEIVAAYKPDVIVVAAFRILPPAVYSQARLGAFNLHASLLPAYRGAAPVNWAIMNGEEETGVTTFFLQQRVDTGTIIMQQKTAIAPEENATELIVRLANIGADVVVE
type: DOMAIN
name: Formyl_transf_N
description: Formyl transferase, N-terminal

phrase: KLTRINTRINWEQPVATLHNFIRGLALKPSAWTTFNDKTLKIFRTTLSTPEHDHPSAPAGSLLVSHGKLYVHGSDGWLELLALQLEGRKPMEAADFARG
type: DOMAIN
name: Formyl_trans_C
description: Formyl transferase, C-terminal

phrase: MRIIVMGTPDFAVPSLQAIAAMGNGFDIVLVVTGQDKPRKSKHAAAEASPIKQAALALNLPVHEVDDVNDPHFAEIVAAYKPDVIVVAAFRILPPAVYSQARLGAFNLHASLLPAYRGAAPVNWAIMNGEEETGVTTFFLQQRVDTGTIIMQQKTAIAPEENATELIVRLANIGADVVVETLRRIAAKNAATAPQDDSLASRAPK
type: DOMAIN
name: Met-tRNA-FMT_N
description: Methionyl-tRNA formyltransferase, N-terminal domain

phrase: RINWEQPVATLHNFIRGLALKPSAWTTFNDKTLKIFRTTLSTPEHDHPSAPAGSLLVSHGKLYVHGSDGWLELLALQLEGRKPME
type: DOMAIN
name: Met-tRNA-FMT_C
description: Methionyl-tRNA formyltransferase, C-terminal domain
Protein sequence:
MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGYQLEIFERRSFFQLLQKHDNDDRLLALLLLNTFTPRAQLASALNLPETWVAERLPRLKQRYERTCCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLAGITRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIVEHSGLFLGDNAVRTLTGLIEKQHQQAQVISADNVQGLLQRVPGIASLNIIDAQLVENITGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDSDLIGLYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREEIEPLLIINNSHYLLDDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQHPAEIIAGLTGYEAFMELLHKG

Annotated regions:
phrase: RQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFTLNGKARIFASGSAGY
type: DOMAIN
name: HTH_11
description: Helix-turn-helix, type 11

phrase: RFFSAPGSFHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQHPAEIIAGLTGYEAFMELLHK
type: DOMAIN
name: PTS_EIIA_type-2_dom
description: PTS EIIA type-2 domain

phrase: NVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILC
type: DOMAIN
name: PTS_EIIA_type-2_dom
description: PTS EIIA type-2 domain

phrase: NVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWSEQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQHPAEIIAGLTGYEAFMEL
type: DOMAIN
name: PTS_EIIA_type-2_dom
description: PTS EIIA type-2 domain
Protein sequence:
MNNYIFVLSSLFLVGCLGLALKPSPIYGGLGLIVSGFVGCLMVLGFGGSFLGLMVFLIYLGGMLVVFGYTTAMATEEYPETWGSNWLILGFLVLGVIMEVFLICVLNYYDEVGVINLDGLGDWLMYEVDDVGVMLEGGIGVAAMYSCATWMMVVAGWSLFAGIFIIIEITRD

Annotated regions:
Protein sequence:
MSLHPVILLVLVLCLGWKINTQEGSLPDITIFPNSSLMISQGTFVTVVCSYSDKHDLYNMVRLEKDGSTFMEKSTEPYKTEDEFEIGPVNETITGHYSCIYSKGITWSERSKTLELKVIKENVIQTPAPGPTSDTSWLKTYSIYIFTVVSVIFLLCLSALLFCFLRHRQKKQGLPNNKRQQQRPEERLNLATNGLEMTPDIVADDRLPEDRWTETWTPVAGDLQEVTYIQLDHHSLTQRAVGAVTSQSTDMAESSTYAAIIRH

Annotated regions:
phrase: PDITIFPNSSLMISQGTFVTVVCSYSDKHDLYNMVRLEKDGSTFMEKSTEPYKTEDEFEIGPVNETITGHYSCIYSKGITWSERSKTL
type: DOMAIN
name: Ig-like_dom
description: Immunoglobulin-like domain

phrase: ISQGTFVTVVCSYSDKHDLYNMVRLEKDGSTFMEKSTEPYKTEDEFEIGPVNETITGHYSCIY
type: DOMAIN
name: Immunoglobulin_dom
description: Immunoglobulin-like beta-sandwich domain