nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MKINKAEFVTSAVAPDHYPVHELPEVALAGRSNVGKSSFINKICQRKALARTSSKPGKTQTLNFFNINDEIMFVDVPGYGYAKVSKTEREKWGVMMEQYLTSQEALRGVVLLVDIRHDPTGDDVTMYNFLKHYEIPVIVVATKLDKIKKSQRQKHEAAVKRKLQFDPSDRFVAFSAETAEGKDEAWKAIYALITEGE

Annotated regions:
phrase: EVALAGRSNVGKSSFINKICQRKALARTSSKPGKTQTLNFFNINDEIMFVDVPGYGYAKVSKTEREKWGVMMEQYLTSQEALRGVVLLVDIRHDPTGDDVTMYNFLKHYEIPVIVVATKLDKIKKSQRQKHEAAVKRKLQFDPSDRFVAFSAETAEGKDEAWKAIYAL
type: DOMAIN
name: G_ENGB_dom
description: EngB-type guanine nucleotide-binding (G) domain

phrase: ELPEVALAGRSNVGKSSFINKICQRKALARTSSKPGKTQTLNFFNINDEIMFVDVPGYGYAKVSKTEREKWGVMMEQYLTSQEALRGVVLLVDIRHDPTGDDVTMYNFLKHYEIPVIVVATKLDKIKKSQRQKHEAAVKRKLQFDPSDRFVAFSAETAEGKDEAWKAIYALIT
type: DOMAIN
name: G_ENGB_dom
description: EngB-type guanine nucleotide-binding (G) domain

phrase: EVALAGRSNVGKSSFINKICQRKALARTSSKPGKTQTLNFFNINDEIMFVDVPGYGYAKVSKTEREKWGVMMEQYLTSQEALRGVVLLVDIRHDPTGDDVTMYNFLKHYEIPVIVVAT
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: EVALAGRSNVGKSSFINKICQRKALARTSSKPGKTQTLNFFNINDEIMFVDVPGYGYAKVSKTEREKWGVMMEQYLTSQEALRGVVLLVDIRHDPTGDDVTMYNFLKHYEIPVIVVATKLDKIKKSQRQKHEAAVKRKLQFDPSDRFVAFSAETAEGKDEAWK
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain
Protein sequence:
MSDLRITLDPDFIAQTKKEVTPHWGELGWVTYKRTYARWLDDKNRSENWDETVKRVIEGNINLDPRLKNNPSKKTIHELTAEAKQLFRLVYGLAATPSGRNLWISGTDYQKRNGDSLNNCWFISIRPQKYGNSHIVPAYLTQDQVAPSMPFSFLFDQLMKGGGVGFSVVDENINQIPKLDQKVDLTIVIDKQSKSYDASLKLGATDLDEWKKTNQEKEDYIYYKLPDTREGWVLANARLIDMHFNSTNPENKKKLVLDISDIRPYGAKIHGFGGTASGPMPLIEMLFDINQILNERAGQKLTAVDATDICNLIGKTVVAGNVRRSAELALGSSNNQDFITMKQDKKKLYHHRWASNNSVAINSEFDNYQPIADSILHNGEPGVVNLELSRNYGRIKDGYQAGIDGEVEGTNPCGEISLANGEPCNLFEVFPFIAQKQGWDLKEAFKLAARYTKRVTFSPYDWEVSRKIINKNRRIGVSMSGIQDWILSTFGHRVVTGFKTATDSETGKEIKDPVYDPEIIKTVDGLYQAVVDADKDYSQELNCNTSIKHTTVKPSGTVAKLAGVSEGMHFHYSGYLIQRIRFQETDPLLPALKDCGYRTEPDIYTPHTICVEFPIKAANADSDNFASAGTVSIAEQFATQAFLQTYWSDNAVSCTITFQNDESDQIAPLLHQYRYAIKSTSLLPYYGGSLKQAPKEPISKEKYEKADNHITGNVEIVFEQTNEDQKGLELVDQSDCDNGACPIK

Annotated regions:
phrase: LDPDFIAQTKKEVTPHWGELGWVTYKRTYARWLDDKNRSENWDETVKRVIEGNINLDPRLKNNPSKKTIHELTAEAKQLFRLVYGLAATPSGRNLWISG
type: DOMAIN
name: RNR_alpha_hel
description: Ribonucleotide reductase, alpha helical domain

phrase: VDLTIVIDKQSKSYDASLKLGATDLDEWKKTNQEKEDYIYYKLPDTREGWVLANARLIDMHFNSTNPENKKKLVLDISDIRPYGAKIHGFGGTASGPMPLIEMLFDINQI
type: DOMAIN
name: RNR-II_ins_dom
description: B12-dependent ribonucleotide reductase, insertion domain
Protein sequence:
MANRLKEKYTNEVIPALTEKFNYTSVMAVPKVEKIVLNMGVGDAVSNAKNLEKAAAELALISGQKPLITKAKKSIAGFRLREGVAIGAKVTLRGERMYEFLDKLVSVSLPRVRDFHGVPTKSFDGRGNYTLGVKEQLIFPEISFDDVDKVRGLDIVIVTTANTDEESRELLKGLGMPFAK

Annotated regions:
phrase: IGAKVTLRGERMYEFLDKLVSVSLPRVRDFHGVPTKSFDGRGNYTLGVKEQLIFPEISFDDVDKVRGLDIVIVTTANTDEESRELLKGLGMP
type: DOMAIN
name: Ribosomal_uL5_C
description: Large ribosomal subunit protein uL5, C-terminal

phrase: SVMAVPKVEKIVLNMGVGDAVSNAKNLEKAAAELALISGQKPLITKAKKSIAGFRL
type: DOMAIN
name: Ribosomal_uL5_N
description: Large ribosomal subunit protein uL5, N-terminal

phrase: LALISGQKPLITKAKK
type: CONSERVED_SITE
name: Ribosomal_uL5_CS
description: Large ribosomal subunit protein uL5, conserved site
Protein sequence:
MRSGVRLGIDVGTVRIGVSCSDLHGTLATPYETVARSGDAADRRRIAEIVTDLGVVEIIVGLPLALSGVHTASTADAVAFAEALVVEVGAPVRLVDERLSTVSAHSALRSSGKNAKSSRPVVDQAAATIILQHALDAERATSRPPGHPVEPRIGP

Annotated regions:
phrase: GVRLGIDVGTVRIGVSCSDLHGTLATPYETVARSGDAADRRRIAEIVTDLGVVEIIVGLPLALSGVHTASTADAVAFAEALVVEVGAPVRLVDERLSTVS
type: DOMAIN
name: YqgF/RNaseH-like_dom
description: YqgF/RNase H-like domain
Protein sequence:
MSDNTEYLTGLLSTHIKRTDLQVTKDQISQLVGFVQMIDKWNKTYNLTSVRDVESMLLKHIMDSIVVAQHLSQSHYIDVGTGPGLPGIPLAIMLPETHFTLLDSLGKRVRFMKQVAYELKLDNIQPVQSRVEDYVSPHQLNGVLSRAFASLNDMLNWCQHLIGNDGTFIALKGQLPQQEIDDLPAGFAVTEIVQLQVPELDGDRHLIKIVKS

Annotated regions:
Protein sequence:
MGRAEAGTPKAISNALKSKGLQRLRWYCSACQKQMRDENGFKCHTQSEGHIRQMNVIAMNPGKRIQDFSNQFLRDFISLLRTAHGEKKIHFNQFYQEYIRDKNHVHMNATRWHTLSEFCKFLGRQGMCRVEENEKGFFISYIDKNPANILRNEANKKRERQEKSDEEQRLRLLDEQIKRAYESAQNNEDNKDGSSREQPVLHEIDLSKKGNPIQLNLSSSSDSHSAQNEFFQTRNTPTFSFSSSSSQTSLKHKPKNVFAELNKSRKKNNKDSLDQGQNVKRPRSAVEDIIAQETMREKRRNIKL

Annotated regions:
phrase: CSACQKQMRDENGFKCHTQSEG
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: NPGKRIQDFSNQFLRDFISLLRTAHGEKKIHFNQFYQEYIRDKNHVHMNATRWHTLSEFCKFLGRQGMCRVEENEKGFFISYIDKNPANILRNEANKKRERQEKSDEEQRLRLLDEQ
type: DOMAIN
name: DNA/RNA-bd_Kin17_WH-like_dom
description: DNA/RNA-binding protein Kin17, WH-like domain

phrase: RQMNVIAMNPGKRIQDFSNQFLRDFISLLRTAHGEKKIHFNQFYQEYIRDKNHVHMNATRWHTLSEFCKFLGRQGMCRVEENEKGFFISYIDKNPANILRNEANKKRERQEKSDEEQRLRLLDEQI
type: DOMAIN
name: DNA/RNA-bd_Kin17_WH-like_dom
description: DNA/RNA-binding protein Kin17, WH-like domain

phrase: LRWYCSACQKQMRDENGFKCHTQSEGHIR
type: DOMAIN
name: C2H2-Znf_KIN17
description: KIN17, C2H2-type zinc finger domain
Protein sequence:
MSLLIDFIDETEEVKDEYISLIRGLVEKAAQMENIEEGAELSVTFVDNERIREINRDYRDKDQPTDVISFAMEEMGEGEMEIVGAEMPRMLGDLIISIPRAKEQAEEYGHSFDRELGFLALHGFLHLLGYDHMTEEDEKEMFGRQKEILEAFGLGR

Annotated regions:
phrase: HGFLHLLGYD
type: CONSERVED_SITE
name: YbeY_CS
description: Endoribonuclease YbeY, conserved site
Protein sequence:
MATAAPSPSSPLRPEDLLSDSSEPPGLNQVSSEVTSQLYTSLHLSRQAEATARAQLYLAPTSSPPNEGLDSLAQELSRSLSVGLENNLKKKDGSKHIFEMESVRGQLQTMLHTSRDTAYRTGSERREEDSFDSDSTATLLNTRPLQDLSPSSSAPALEELFPRYTSLRPGPPTNPPDFQGLRDALDAELTRRKHCERHIQSLQTRVLELQQQLAVAVAADHKKDLMIEQLDKTLARVVEGWNRHEAERTEVLRGLQEERQAAELTRSKQQETVTRLEQSLSEAMEALSREQEGARLQQREKEALEEERQALTLRLEVEQQQCRTLQEERDEARAGQLSEHRKLEALQVALQEERQAWIKQEHQLKERLQALQEEGQAQLEREKGNSQREAQAAWETQQQFALLQTEVRRLEGDLDTVRRERDALQLEMSLVQARYESQRIQMESELAVQLEQRVTERLAEAQENSLRQAASLRDHHRKQLQELSGQHQQELAAQLAQFKVEMADREERQQQVAQDYELRLAREQARVRDLKSGNQQLEEQRAELVERLQAMLQAHWEEANQLLSTTLLPPNPQAPLAEPSSPGPLEPEKGERRTWAMPPMAVALKPVLQQSREVKGDVPGAPSVLCSTSPDLSLLLGPPFQNQNSFQPLEPKPDVTPPTAGPFSALEAFTDDHRAERPFPEEDPGSDGDARLPPASQLEGLKNFLQQLLETAPQSNGNPSADLLLPKAGSRAVSSWEEAPQVPRLPPPVHKTKVPLAMASSLFRVHGLPSTNLQGSGLSTGSPEKDGLNLVDVSELLRLYQARGWGALPAEDLLLYLKRLEHSGTDGQGELVPRRNTDSRLGETTRKEIPSQAVPRRLASVPKTEKPARKKSGHPGPSMRSRGGIWR

Annotated regions:
Protein sequence:
MFRVCRRLYHPNTLEHAVGNRLRPLAYEQDSPQYKVLQRALEAHVPVLGFNERAIVRAAGDLGYGSAVLSALAAPNSPALLNVPSAVLELVKFHLVTKRVALADAAAQGNVSMEQLFLQRVEADRPLAGQLTQLLSILSLPGEFLVNTAMPELFRLSDDLIYYSGEKDHPDLAWYSKRAAVAMAYVSTNLFMARDRSPALEETLHFARRRLQQVDSLGTAYNNVEEFAWYQLLMAMNLVKSQLTRG

Annotated regions:
phrase: VNTAMPELFRLSDDLIYYSGEKDHPDLAWYSKRAAVAMAYVSTNLFMARDRSPALEETLHFARRRLQQVDS
type: DOMAIN
name: COQ9_C
description: COQ9, C-terminal domain
Protein sequence:
MTNERQNAPFNDQESNTIRILIASDNHVGYAEKDPVRGNDSFVSFDEILTIAREKEVDMVLLGGDIFHDNRPSRKAFYQALRSLRLNCLGDKPCELELLSDTSVTTGDTAICSVNYQDPNINVAIPVFSIHGNHDDPSGDGRYSALDILQVTGLVNYFGRVPENDNITISPILLQKGSTKLALYGLSNVRDQRLYHSFRENKVKFLRPDLYQEEWFNLLVVHQNHAAHTETSYLPESFIQDFYDFVLWGHEHECIIDGTYNPMQKFTVVQPGSSVATSLSPGETVPKHCGILHITGRDFFMEKIRLRTVRPFVMKDIVLSEVQSIPPMVDNKREVLTYLISQVEEAIEEANQQWLEAQGDDPAVLNEKHPLPLIRLRVDYTGGYQTENPQRFSNRFVGRVANATDVVLFHLKRKYTRTKKNNEVVDNVGEDGKINALRVESLVNEYLKKNQLECLPGNVLGQAVINFVEKDDKDAIKECVEDHLSKQINLLVKKRVTEENLEEEIKTLVKNIPQLSTSKRKEYESMATPASTSFRVTSPDMDEDKTSGSPVRLEENEEKDDFQELNHAEPSSQPPKTTKTRNLPGSMFQKSASTKRTPAKTNTPKKTSGRTQGKRVNKPAEKSTQLMMTQSFNSSQKPGSQYLDDDDEILDD

Annotated regions:
phrase: IRILIASDNHVGYAEKDPVRGNDSFVSFDEILTIAREKEVDMVLLGGDIFHDNRPSRKAFYQALRSLRLNCLGDKPCELELLSDTSVTTGDTAICSVNYQDPNINVAIPVFSIHGNHDDPSGDGRYSALDILQVTGLVNYFGRVPENDNITISPILLQKGSTKLALYGLSNVRDQRLYHSFRENKVKFLRPDLYQEEWFNLLVVHQNHAAHTETSYLPESFIQDFYDFVLWGHEHE
type: DOMAIN
name: Calcineurin-like_PHP_ApaH
description: Calcineurin-like phosphoesterase domain, ApaH type

phrase: FFMEKIRLRTVRPFVMKDIVLSEVQSIPPMVDNKREVLTYLISQVEEAIEEANQQWLEAQGDDPAVLNEKHPLPLIRLRVDYTGGYQTENPQRFSNRFVGRVANATDVVLFHLKRKYTRTKKNNEVVDNVGEDGKINALRVESLVNEYLKKNQLECLPGNVLGQAVIN
type: DOMAIN
name: Mre11_DNA-bd
description: Mre11, DNA-binding

phrase: RILIASDNHVGYAEKDPVRGNDSFVSFDEILTIAREKEVDMVLLGGDIFHDNRPSRKAFYQALRSLRLNCLGDKPCELELLSDTSVTTGDTAICSVNYQDPNINVAIPVFSIHGNHDDPSGDGRYSALDILQVTGLVNYFGRVPENDNITISPILLQKGSTKLALYGLSNVRDQRLYHSFRENKVKFLRPDLYQEEWFNLLVVHQNHAAHTETSYLPESFIQDFYDFVLWGHEHECIIDGTYNPMQKFTVVQPGSSVATSL
type: DOMAIN
name: Mre11_N
description: DNA double-strand break repair protein Mre11, N-terminal metallophosphatase domain

phrase: FFMEKIRLRTVRPFVMKDIVLSEVQSIPPMVDNKREVLTYLISQVEEAIEEANQQWLEAQGDDPAVLNEKHPLPLIRLRVDYTGGYQTENPQRFSNRFVGRVANATDVVLFHLKRKYTRTKKNNEVVDNVGEDGKINALRVESLVNEYLKKNQLECLPGNVLGQAVIN
type: DOMAIN
name: Mre11_DNA-bd
description: Mre11, DNA-binding
Protein sequence:
MLHSLFRLTLLFYALFNSLGSLPVFVALLKKFSFRKQQRIILRECIFALLTLILFITFGQGFFRLLEVSLPAFQLTGGILLGSLAINMMKALPSQEETFDQYEDEPIFYPLAFPVITGPATITSTLGHMEEGIFPKELVLGAIMLAWAFSLITLFFSSSINRLFGQMGLLALERLFGISLALMAGNLMLKAISTAFNIGYYVMA

Annotated regions:
Protein sequence:
MKPSYPQHIAVIMDGNGRWAKKQGKKRTQGHKEGAKIVRDITQWCAEKGIPYLTLYAFSTENWKRPKIEVDFLMKLLEKYLHDEKPVYMKNHIRFRVIGDISVFNTRLKNAILELEHATQNHTKLTQILALNYGSRDEIARTFIKLAHTLTPHTLASLSSQDIISMINANLDTATLPDVDMLIRTGGEKRISNFMLWQASYAELFFTPTLFPSFGKNELNAMLEEFLQRQRRFGGVE

Annotated regions:
phrase: DMLIRTGGEKRISNFML
type: CONSERVED_SITE
name: UPP_synth-like_CS
description: Di-trans-poly-cis-decaprenylcistransferase-like, conserved site
Protein sequence:
MIYNFGAGPSVLPKEVLKKVQEELLDFEKSGMSVMEISHRSKAFQKVIDEAENDLRDLMSIPQNYKILFLQGGASSQFSMVPMNLAIGKKAYYNISGAFGEKAYDEAVKLSHFLDLMAISLGSTKKDNYNHLLKIDKSKIDEKNGAYLHLTTNNTIEGTSIFPENLPEFASLPLVADMSSNILAVDYDVSKFGLIYAGAQKNLGIAGLTIVIIREDLLNEAESLSSMMDYQILVENGSMYNTPPTFAIYVAGLVFKWVKAQGGVKKLEEMNQRKAQLLYDLIDQSDFYQNPIKNKDERSICNVVFTSPSQELDELFTQKAEEKGFKSLKGHRSVGGMRASIYNAFPLEGVVELVKFMKEFEEGYK

Annotated regions:
phrase: FGLIYAGAQKNLGIAGLTI
type: BINDING_SITE
name: Aminotrans_V_PyrdxlP_BS
description: Aminotransferase class-V, pyridoxal-phosphate binding site

phrase: IYNFGAGPSVLPKEVLKKVQEELLDFEKSGMSVMEISHRSKAFQKVIDEAENDLRDLMSIPQNYKILFLQGGASSQFSMVPMNLAIGKKAYYNISGAFGEKAYDEAVKLSHFLDLMAISLGSTKKDNYNHLLKIDKSKIDEKNGAYLHLTTNNTIEGTSIFPENLPEFASLPLVADMSSNILAVDYDVSKFGLIYAGAQKNLGIAGLTIVIIREDLLNEAESLSSMMDYQILVENGSMYNTPPTFAIYVAGLVFKWVKAQGGVKKLEEMNQRKAQLLYDLIDQSDFYQNPIKNKDERSICNVVFTSPSQELDELFTQKAEEKGFKSLKGHRSVGGMRASIYNAFPLEG
type: DOMAIN
name: Aminotrans_V_dom
description: Aminotransferase class V domain
Protein sequence:
MTSISEDSDKEKARSVSVDLNNDASLLIDIPDALCERDKVKFTVHTKTTLSPFQKPDFSVPRQHEDFIWLHDAIVETEEYAGLIIPPAPPKPDFEGPREKMHKLGEGESSMTKEEYAKMKQELEAEYLAVFKKTVQVHEVFLQRLSSHPSFSKDRNFHIFLEYDQDLSVRRKNAKEMFGGFFKNMVKTADEVLISGVKEVDEFFEQEKIFLLDYSNKIKDSTAKAEKMTRSHKNVADDYNHISGALNSVAADNNSAFKKHLEKCVEVFEKLRKVEDRVASDQELKLTELLRYYTRDIQAAKDLLYRRARALADYENSNKALDKARLKGKDVPQAEENQKQCLQKFDRLSESGKKELTSFKARRVVAFRKNLIEMTELEIKHAKNSMSTLQGSIELLKSN

Annotated regions:
phrase: MTSISEDSDKEKARSVSVDLNNDASLLIDIPDALCERDKVKFTVHTKTTLSPFQKPDFSVPRQHEDFIWLHDAIVETEEYAGLIIPPAPPKPDFEGPREKMHKLGEGESSMTKEEYAKMKQELEAEYLAVFKKTVQVHEVFLQRLSSHPSFSKDRNFHIFLEYDQD
type: DOMAIN
name: PX_dom
description: Phox homology

phrase: FFKNMVKTADEVLISGVKEVDEFFEQEKIFLLDYSNKIKDSTAKAEKMTRSHKNVADDYNHISGALNSVAADNNSAFKKHLEKCVEVFEKLRKVEDRVASDQELKLTELLRYYTRDIQAAKDLLYRRARALADYENSNKALDKARLKGKDVPQAEEN
type: DOMAIN
name: Vps5_C
description: Sorting nexin/Vps5-like, C-terminal

phrase: FQKPDFSVPRQHEDFIWLHDAIVETEEYAGLIIPPAPPKPDFEGPREKMHKLGEGESSMTKEEYAKMKQELEAEYLAVFKKTVQVHEVFLQRLSSHPSFSKDRNFHIFLE
type: DOMAIN
name: PX_dom
description: Phox homology
Protein sequence:
MNLIKMSDIDLSGKRVLIREDLNVPIKDGMITSDQRLQAALPTIKSALDNGAAVIVLSHLGRPEEGKYEKKFSLEPVADYLRKNLEYPVRFVKDYLSGVDVKPGELVVCENVRFNPGEKANDEALAKKLANLCDVFVMDAFGTAHRAQASTYGVAQYAPVAVAGPLLIRELEALNQVLKAPKKPIVAIVGGAKVSSKLSLLKQLVGMVDVLIPGGGIANTFLKAQGFEIGISLYEPDLLDEARHILILAKEKGCQIPLPTDVVVGKTFSETCPAFNKSLSNVAEDDMILDIGPETIRDYVDLIHEANTIIWNGPVGVFEFPQFAYGTRAIAIAIAESDAFSIAGGGDTLAAVDLYDLNQQISYISTGGGAFLECLEGKTLPAVAILQERAKHVKTN

Annotated regions:
phrase: RVLIREDLNV
type: CONSERVED_SITE
name: Phosphoglycerate_kinase_CS
description: Phosphoglycerate kinase, conserved site
Protein sequence:
MLTKTKSDEIKTQKDSTTGSYWITTFGCQMNKADSERMAGTLEKMGYTRADNELNADLVLYNTCTIRDNAEQKVYSFLGRQAKRKHKTPRLKLVVAGCLAQQEGESLLRRVPELDLVMGPQHVNNLENLLGKVDLGNQVVATEETFISEDITSARRESSICGWVNIIYGCNERCSYCVVPSVRGKEQSRYPNAIKSEIQKLADDNFKEITLLGQNIDAYGRDLPGTTKEGRKENTLTDLLYYIHDVKGIRRIRFATSHPRYFSKRLIQACYELDKVCEHFHIPFQSGNDEILKQMSRGYSIKKYKNIIENIRSLMPDASITADAIVAFPGETEKQYQDTLKLISEIGFDQVNTAAYSARPNTPAAVWTNQLSEEVKKARLQEINDLVEKTARSRNQRYIDNIESVLIEGLNPKNSSQIMGRTRTNRLTFVEIPKNINFNFSLGDEINVRINEARPFSLTGELSL

Annotated regions:
phrase: VNIIYGCNERCSYCVVPSVRGKEQSRYPNAIKSEIQKLADDNFKEITLLGQNIDAYGRDLPGTTKEGRKENTLTDLLYYIHDVKGIRRIRFATSHPRYFSKRLIQACYELDKVCEHFHIPFQSGNDEILKQMSRGYSIKKYKNIIENIRSLMPDASITADAIVAFPGETEKQYQDTLKL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: ESVLIEGLNPKNSSQIMGRTRTNRLTFVEIPKNINFNFSLGDEINVRINEARPFSLTGE
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: QRYIDNIESVLIEGLNPKNSSQIMGRTRTNRLTFVEIPKNINFNFSLGDEINVRINEARPFSLTGELS
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: VNIIYGCNERCSYCVVPSVR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: RESSICGWVNIIYGCNERCSYCVVPSVRGKEQSRYPNAIKSEIQKLADDNFKEITLLGQNIDAYGRDLPGTTKEGRKENTLTDLLYYIHDVKGIRRIRFATSHPRYFSKRLIQACYELDKVCEHFHIPFQSGNDEILKQMSRGYSIKKYKNIIENIRSLMPDASITADAIVAFPGETEKQYQDTLKLISEIGFDQVNTAAYSARPNTPAAVWTNQLSEEVKKARLQEINDLVEKTARS
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: YWITTFGCQMNKADSERMAGTLEKMGYTRADNELNADLVLYNTCTIRDNAEQKVYSFLGRQAKRKHKTPRLKLVVAGCLAQQEGESLLRRVPELDLVM
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: ICGWVNIIYGCNERCSYCVVPSVRGKEQSRYPNAIKSEIQKLADDNFKEITLLGQNIDAYGRDLPGTTKEGRKENTLTDLLYYIHDVKGIRRIRFATSHPRYFSKRLIQACYELDKVCEHFHIPFQSGNDEILKQMSRGYSIKKYKNIIENIRSLMPDASITADAIVAFPGETEKQYQDTLKLISEIGFDQVNTAAYSARPNTPAAVWTNQLSEEVKKARLQEIN
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: GSYWITTFGCQMNKADSERMAGTLEKMGYTRADNELNADLVLYNTCTIRDNAEQKVYSFLGRQAKRKHKTPRLKLVVAGCLAQQEGESLLRRVPELDLVMGPQHVNNLENLLGKVD
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal
Protein sequence:
MSFTIAIIGRPNVGKSTLFNRLVGQKLALVDDLPGVTRDRREGEARLGDLEFTIIDTAGLDEGAKGSLTARMQEQTEAAIAQADALFFVVDARIGLTPTDRAFADFARRANKPVLLVANKSEGKHGDAGAMEAFALGLGDPIQISAEHGEGMGELYDALAKLMPEPVEEDEDEDDAPLSEEEAATRPIRVAIVGRPNAGKSTLINHLLGEERLLTSPEAGTTRDSIAVEINWKGREFRVFDTAGLRRRSRIEEKLEKLSVADALRAVRFAEVVVLMMDTQNRFEEQDLRIADLVEREGRALVLAANKWDLMETKGGGAISGLRRDADHWLPQVKGVPIVAVSGLMGEGIDRLMQAIQDAYAVWNRRVSTSALNRWFEQAVQANPPPAVSGRRLKLNYITQTKARPPSFVLFCSRADAVPQSYLRYLTNSMREAFDLPGTPVRITLREKANPFAHKRKRPS

Annotated regions:
phrase: RVAIVGRPNAGKSTLINHLLGEERLLTSPEAGTTRDSIAVEINWKGREFRVFDTAGLRRRSRIEEKLEKLSVADALRAVRFAEVVVLMMDTQNRFEEQDLRIADLVEREGRALVLAAN
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: TIAIIGRPNVGKSTLFNRLVGQKLALVDDLPGVTRDRREGEARLGDLEFTIIDTAGLDEGAKGSLTARMQEQTEAAIAQADALFFVVDARIGLTPTDRAFADFARRANKPVLLVAN
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: IRVAIVGRPNAGKSTLINHLLGEERLLTSPEAGTTRDSIAVEINWKGREFRVFDTAGLRRRSRIEEKLEKLSVADALRAVRFAEVVVLMMDTQNRFEEQDLRIADLVEREGRALVLAANKWDLMETKGGGAISGLRRDADHWLPQVKGVPIVAVSGLMGEGIDRLMQAIQDAYAVW
type: DOMAIN
name: G_ENGA
description: EngA-type guanine nucleotide-binding (G) domain

phrase: IAIIGRPNVGKSTLFNRLVG
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: IIDTAGLDEGAKGSL
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: RPIRVAIVGRPNAGKSTLINHLLGEERLLTSPEAGTTRDSIAVEINWKGREFRVFDTAGLRRRSRIEEKLEKLSVADALRAVRFAEVVVLMMDTQNRFEEQDLRIADLVEREGRALVLAANKWDLMETKGGGAISGLRRDADHWLPQVKGVPIVAVSGLMGEGIDRLMQA
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: TIAIIGRPNVGKSTLFNRLVGQKLALVDDLPGVTRDRREGEARLGDLEFTIIDTAGLDEGAKGSLTARMQEQTEAAIAQADALFFVVDARIGLTPTDRAFADFARRANKPVLLVANKSEGKHGDAGAMEAFALGLGDPIQISAEHGEGMGELYDA
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: RVSTSALNRWFEQAVQANPPPAVSGRRLKLNYITQTKARPPSFVLFCSRADAVPQSYLRYLTNSMREAFDLPGTPVRITL
type: DOMAIN
name: KH_dom-like
description: GTPase Der, C-terminal KH-domain-like

phrase: FTIAIIGRPNVGKSTLFNRLVGQKLALVDDLPGVTRDRREGEARLGDLEFTIIDTAGLDEGAKGSLTARMQEQTEAAIAQADALFFVVDARIGLTPTDRAFADFARRANKPVLLVANKSEGKHGDAGAMEAFALGLGDPIQISAEHGEGMGELYDALAKLMPEP
type: DOMAIN
name: G_ENGA
description: EngA-type guanine nucleotide-binding (G) domain
Protein sequence:
MEVKPLKKLKLYGFNNLTKTLSFNMYDICYAKTPEHRDAYIQYIDEEYNAQRLTSIVTEVARIVGANILNIAKQDYDPQGASVTMLIAEEHLGPENPDDNPFDPVYTDKEGPLPDAVVAHLDKSHITVHTYPESHPHGGISTFRADIDVSTCGQISPLKALNFLIESFAPDIIVADYRVRGFTRDVDGKKVFIDHKINSIQNYVDRKYRDLYQMIDVTVFQEYIFHTKMILKDFDLDNYLFGTAKKELSINDKRKIKQRLKKEMAEIFYGKNMPRM

Annotated regions:
Protein sequence:
MHLSQIVLYLSLLIALGPVVLSDQEAHQQPSVSTPVDTDQCATCEVRQQIKTMRLNAIKSQILSKLRMKEAPNISREIVKQLLPKAPPLQQLLDQYDVLGDDNREEVLEDDDEHATTETIVMVATEPDPAVQVDGQPKCCFFSITQKFQASRVVRAQLWVHLRPSEEVTTVFLQISRLIPVTDGNRHIRSRSLKIDVNPGPASWQSIDVKQVLTVWLRQPETNWGIEINAFDSRGNDLAVTSAEPGEEGLQPFMEVKISEGPRRARRDSGLDCDENSPESRCCRYPLTVDFEDFGWDWIIAPKRYKANYCSGECEYMHLQKYPHTHLVNKANPRGTAGPCCTPTKMSPINMLYFNRKEQIIYGKIPSMVVDRCGCS

Annotated regions:
phrase: RARRDSGLDCDENSPESRCCRYPLTVDFEDFGWDWIIAPKRYKANYCSGECEYMHLQKYPHTHLVNKANPRGTAGPCCTPTKMSPINMLYFNRKEQIIYGKIPSMVVDRCGC
type: DOMAIN
name: TGF-b_C
description: Transforming growth factor-beta, C-terminal

phrase: IIAPKRYKANYCSGE
type: CONSERVED_SITE
name: TGFb_CS
description: Transforming growth factor beta, conserved site

phrase: CCRYPLTVDFEDFGWDWIIAPKRYKANYCSGECEYMHLQKYPHTHLVNKANPRGTAGPCCTPTKMSPINMLYFNRKEQIIYGKIPSMVVDRCGC
type: DOMAIN
name: TGF-b_C
description: Transforming growth factor-beta, C-terminal

phrase: CEVRQQIKTMRLNAIKSQILSKLRMKEAPNISREIVKQLLPKAPPLQQLLDQYDVLGDDNREEVLEDDDEHATTETIVMVATEPDPAVQVDGQPKCCFFSITQKFQASRVVRAQLWVHLRPSEEVTTVFLQISRLIPVTDGNRHIRSRSLKIDVNPGPASWQSIDVKQVLTVWLRQPETNWGIEINAFDSRGNDLAVTSAEPGEEGLQPF
type: DOMAIN
name: TGF-b_propeptide
description: TGF-beta, propeptide

phrase: RCCRYPLTVDFEDFGWDWIIAPKRYKANYCSGECEYMHLQKYPHTHLVNKANPRGTAGPCCTPTKMSPINMLYFNRKEQIIYGKIPSMVVDRCG
type: DOMAIN
name: TGF-b_C
description: Transforming growth factor-beta, C-terminal
Protein sequence:
MERQISYRSLSKIPGLFSLLLAATLSRLAGRMFVLTLVLFALARFSSPVLAGWLTFAAIVPGLIVSPLAGVLLDCVGPTIAVRIDMIASTAFITAISLAGWLGWSSPPVVCTLAMLFSLAGPLGIAGIRTLLPRLVPPHALDQANALDTAVYSIVDVVGPAMAGGLVGWLGPEAAMSLIAAACAGAAVCLSQVQRLPGLASSRTSLLRQAIKGIYVVVRQPTLRGLAVSQSLYQMTWGALHVVIPVFVAGNYTVAAGSTVVGLLWALVGIAGGVGALLAGHLCTTGRERHIMTAGMAVTAFATWPIAAEFGFRGLTIGLLLAGAMSGPIDVAMLTLRQRRTNPRQLGRVMSISISVNQAGFPLGAAIAGVVITESLSAIFVLAGITSVLAAIATLSIPPDATPVA

Annotated regions:
phrase: TLRGLAVSQSLYQMTWGALHVVIPVFVAGNYTVAAGSTVVGLLWALVGIAGGVGALLAGHLCTTGRERHIMTAGMAVTAFATWPIAAEFGFRGLTIGLLLAGAMSGPIDVAMLTLRQRRTNPRQLGRVMSISISVNQAGFPLGAAIAGVVITESLSAIFVLAGITSVLAAIATLSIPPDATPV
type: DOMAIN
name: MFS_dom
description: Major facilitator superfamily domain
Protein sequence:
MKVLQEKILNEGKVLSGDVLKVDAFLNHQIDPVLMQEIGKEFAKRFKEENITKIVTIESSGIAPAVMAALELGVKVIFARKRKSLTLQDNMYVANVYSFTKQETNEISLSRNHIDENDRVLIIDDFLANGQAALGLMSLVEQAGASIAGIGIVIEKAFQDGGKKLREQGVRVESLAEIASLDNGTVTFVQQETAEVK

Annotated regions:
phrase: IGKEFAKRFKEENITKIVTIESSGIAPAVMAALELGVKVIFARKRKSLTLQDNMYVANVYSFTKQETNEISLSRNHIDENDRVLIIDDFLANGQAALGLMSLVEQAGASIAGIGIVIEKAFQDGGKKLREQGVRVESLA
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: LMQEIGKEFAKRFKEENITKIVTIESSGIAPAVMAALELGVKVIFARKRKSLTLQDNMYVANVYSFTKQETNEISLSRNHIDENDRVLIIDDFLANGQAALGLMSLVEQAGASIAGIGIVIEK
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain
Protein sequence:
MATEIDINRIQKDIFIEHKGEPYRVLDYEHVKPGKGQAFVRVKAKNMLTGNVTELTFKASDRIPLADFEQVYATYSYNDGENYYFMNTQTYDMIAVPKEKIEEEAKFLKEGMEVIVFLYKGQPIGIELPKHVELQVVETEPAFKGDTQAGGTKPAKLETGAVIQVPFFVKEGDIVKVDTRTGSYVERVKEAK

Annotated regions:
phrase: ATYSYNDGENYYFMNTQTYDMIAVPKEKIEEEAKFLKEGMEVIVFLYKGQP
type: DOMAIN
name: Transl_elong_P/YeiP_cen
description: Translation elongation factor P/YeiP, central

phrase: VELQVVETEPAFKGDTQAGGTKPAKLETGAVIQVPFFVKEGDIVKVDTRTGSYVE
type: DOMAIN
name: Elong-fact-P_C
description: Elongation factor P, C-terminal

phrase: KPAKLETGAVIQVPFFVKE
type: CONSERVED_SITE
name: Transl_elong_P/YeiP_CS
description: Translation elongation factor P/YeiP, conserved site

phrase: VELQVVETEPAFKGDTQAGGTKPAKLETGAVIQVPFFVKEGDIVKVDTRTGSYVE
type: DOMAIN
name: Elong-fact-P_C
description: Elongation factor P, C-terminal

phrase: VELQVVETEPAFKGDTQAGGTKPAKLETGAVIQVPFFVKEGDIVKVDTRTGSYVE
type: DOMAIN
name: Elong-fact-P_C
description: Elongation factor P, C-terminal

phrase: INRIQKDIFIEHKGEPYRVLDYEHVKPGKGQAFVRVKAKNMLTGNVTELTFKASD
type: DOMAIN
name: Transl_elong_KOW-like
description: Translation elongation factor, KOW-like

phrase: EQVYATYSYNDGENYYFMNTQTYDMIAVPKEKIEEEAKFLKEGMEVIVFLYKGQPIGIEL
type: DOMAIN
name: Transl_elong_P/YeiP_cen
description: Translation elongation factor P/YeiP, central

phrase: QVYATYSYNDGENYYFMNTQTYDMIAVPKEKIEEEAKFLKEGMEVIVFLYKGQP
type: DOMAIN
name: Transl_elong_P/YeiP_cen
description: Translation elongation factor P/YeiP, central
Protein sequence:
MENFNQIFTVLAASEGIGLNLDILETGLLNILALVAILVYTGKDFLGSILQERKSTIVKSVQDAEDRLNEANRRLSEAQKQLSQAHVVISEIRNETKTAKTNLLKSDATTAKKELTTRFNRAISSFRSKERVIFLDVKQQIISLVLKRSAIQAKETFGSKKRARALINETIQKLEGDLL

Annotated regions:
Protein sequence:
MEKSKNIWSLILTEIKKELSEEEFYVWFENLCFLESVGDNIKISTPNLFHKNQIEKRFTKKIKEILTNNGYDNVTIVFTNQSPKTYSSKEESEKTTFNETFPTLDKLKGTTLSKEPLQSIKDRIKMYIKKEEEPKNFKNPFLKKRYTFENFIIGPNNKLAYNASLSISKNPGTKYNPCLIYGGVGLGKTHLLQSIGNKTEELHNNLKILYVTAENFLNEFVESIKTHETKKFKKKYRYLDMLLIDDIHDLQKKEGIQEELFHTFNALYEDNKQLVFTCDRPPSELTNFTDRLKSRFTRGLNVDISKPNFELRVAIIEKKAEEDGIKVPKNILNLVAQKVTTNVRDLEAAVTKLKAYIDLDNIEIDIDIVEKIIKEIIIYEKETTNEPSNKINIENIKKILLRELKIAHKDIEGHSKKPEITKARHIYAYLLRNFTELSTIEIGKIIGGKTHSTVLYSINKIDRDRNKDKEINNLITELMNKIKKN

Annotated regions:
phrase: IGKIIGGKTHSTVLYSINK
type: CONSERVED_SITE
name: Chromosome_initiator_DnaA_CS
description: Chromosomal replication control, initiator DnaA, conserved site

phrase: LKKRYTFENFIIGPNNKLAYNASLSISKNPGTKYNPCLIYGGVGLGKTHLLQSIGNKTEELHNNLKILYVTAENFLNEFVESIKTHETKKFKKKYRYLDMLLIDDIHDLQKKEGIQEELFHTFNALYEDNKQLVFTCDRPPSELTNFTDRLKSRFTRGLNV
type: DOMAIN
name: DnaA_dom
description: Chromosomal replication initiator protein DnaA, ATPAse domain

phrase: KYNPCLIYGGVGLGKTHLLQSIGNKTEELHNNLKILYVTAENFLNEFVESIKTHETKKFKKKYRYLDMLLIDDIHDLQKKEGIQEELFHTFNALYEDNKQLVFTCDRPPSELTNFTDRLKSRFTRGLNVDIS
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: NIENIKKILLRELKIAHKDIEGHSKKPEITKARHIYAYLLRNFTELSTIEIGKIIGGKTHSTVLYSINK
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: IENIKKILLRELKIAHKDIEGHSKKPEITKARHIYAYLLRNFTELSTIEIGKIIGGKTHSTVLYSINKIDRDRNKDKEINNLITELMNK
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: IENIKKILLRELKIAHKDIEGHSKKPEITKARHIYAYLLRNFTELSTIEIGKIIGGKTHSTVLYSINK
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: NIWSLILTEIKKELSEEEFYVWFENLCFLESVGDNIKISTPNLFHKNQIEKRFTKKIKEIL
type: DOMAIN
name: DnaA_N_dom
description: DnaA N-terminal domain
Protein sequence:
AGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIASNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFSVPAMYVAIQAVLSLYASGRTTGTGIVLDSGDGVSHHVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDMKEKLAYVALDYEQELETARSSSSIEKNYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKRDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTLQQV

Annotated regions:
phrase: LLTEAPLNPKAN
type: CONSERVED_SITE
name: Actin/actin-like_CS
description: Actin/actin-like conserved site

phrase: YVGDEAQSKR
type: CONSERVED_SITE
name: Actin_CS
description: Actin, conserved site
Protein sequence:
MELYSLTIHELRELLKKREVSALEVTKSYLERIKEVEPKIDALITITEDFALQRAKEADEKIKNGEDTALTGIPVIIKDNISTEGIKTTCSSKMLENYIPPYNATVVEKLLEEGVIILGKSNLDEFAMGSSTENSAFKTTKNPWDLSRVPGGSSGGSAAAIAADEAAFALGSDTGGSIRQPASLCGVVGMKPTYGLVSRYGLVAFASSLDQIGPFTKDVTDCAIVLNTIIGHDPKDSTSLKIDKPDYTSYLKEDIKGLRIGVAKEFFGEGIEEGVKETVQESIKVLQDLGAEIIDISIPYVEYALPAYYIIASAEASSNLARYDGIRYGHIAGKYEDLIDMYMVTRSEGFGKEVKRRIMLGTYALSSGYYDAYYKKALKVRTLIKNDFEKAFEKCDVIIGPTSPTVAFKIGERANDPLAMYLADIYTVSVNIAGLPGISIPCGLSDGLPVGLQIIGRHFDEGKILNVAYAFEQANKFNAKPQAIGGAR

Annotated regions:
phrase: GGSSGGSAAAIAADEAAFALGSDTGGSIRQP
type: CONSERVED_SITE
name: Amidase_CS
description: Amidase, conserved site

phrase: EVTKSYLERIKEVEPKIDALITITEDFALQRAKEADEKIKNGEDTALTGIPVIIKDNISTEGIKTTCSSKMLENYIPPYNATVVEKLLEEGVIILGKSNLDEFAMGSSTENSAFKTTKNPWDLSRVPGGSSGGSAAAIAADEAAFALGSDTGGSIRQPASLCGVVGMKPTYGLVSRYGLVAFASSLDQIGPFTKDVTDCAIVLNTIIGHDPKDSTSLKIDKPDYTSYLKEDIKGLRIGVAKEFFGEGIEEGVKETVQESIKVLQDLGAEIIDISIPYVEYALPAYYIIASAEASSNLARYDGIRYGHIAGKYEDLIDMYMVTRSEGFGKEVKRRIMLGTYALSSGYYDAYYKKALKVRTLIKNDFEKAFEKCDVIIGPTSPTVAFKIGERANDPLAMYLADIYTVSVNIAGLPGISIPCGLSDGLPVGLQIIGRHFDEGKI
type: DOMAIN
name: Amidase_dom
description: Amidase signature domain