nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTTPDPLADAPLPILPGRESLCGLSDDQVTDWLARRDQPSYRGQQVRQWIFARGAESISDMTDLPSELREQLANEFDLFTGQVVQHQVAGDRTEKLLVELVDGKQVECVLMREPRRWTACISTQVGCAMGCVFCASGLLGLDRNLSRTEILEQVLRLTRRLEPGERLTNIVVMGIGEPLANLTQLLEALEEVHAEDGLGLSPRRITISTVGLPKGIRQLAEIGRPYNLAVSLHAPNDELRNRLVPVNEQIGIDAILEAADEFFERTGRRVTYEYVLLSETNDQPRHARQLAALLSNRKAHVNLIPMNNVDVLRWTCPGEPQTQRFATILEEAGVATTVRKRKGADIDAACGQLRLTNLKNGVPKGTQPGVR

Annotated regions:
phrase: ESLCGLSDDQVTDWLARRDQPSYRGQQVRQWIFARGAESISDMTDLPSELREQLANEFDLFTGQVVQHQVAGDRTEKLLVELVDGKQVECVLMREPRRWTACISTQVGCAMGCVFCASGLLGLDRNLSRTEILEQVLRLTRRLEPGERLTNIVVMGIGEPLANLTQLLEALEEVHAEDGLGLSPRRITISTVGLPKGIRQLAEIGRPYNLAVSLHAPNDELRNRLVPVNEQIGIDAILEAADEFFERTGRRVTYEYVLLSETNDQPRHARQLAALLSNRKAHVNLIPMNNVDVLRWTCPGEPQTQRFATILEEAGVATTVRKRKGADIDAACGQLRLTNL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LCGLSDDQVTDWLARRDQPSYRGQQVRQWIFARGAESISDMTDLPSELREQLAN
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: ISTQVGCAMGCVFCASGLLGLDRNLSRTEILEQVLRLTRRLEPGERLTNIVVMGIGEPLANLTQLLEALEEVHAEDGLGLSPRRITISTVGLPKGIRQLAEIGRPYNLAVSLHAPNDELRNRLVPVNEQIGIDAILEAADEFFERTGRRVTYEYVLLSETNDQP
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: EPRRWTACISTQVGCAMGCVFCASGLLGLDRNLSRTEILEQVLRLTRRLEPGERLTNIVVMGIGEPLANLTQLLEALEEVHAEDGLGLSPRRITISTVGLPKGIRQLAEIGRPYNLAVSLHAPNDELRNRLVPVNEQIGIDAILEAADEFFERTGRRVTYEYVLLSETNDQPRHARQLAALLSNRKAHVNLIPMNNVDVLRWTCPGEPQTQRFATILEEAGVATTVRKRKGA
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MAKEDSIEMQGTILETLPNTMFRVELENGHVLTAHISGKMRKNYIRILTGDKVTVEMTPYDLTKGRIIFRAR

Annotated regions:
phrase: EDSIEMQGTILETLPNTMFRVELENGHVLTAHISGKMRKNYIRILTGDKVTVEMTPYDLTKGRIIFRA
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: IEMQGTILETLPNTMFRVELENGHVLTAHISGKMRKNYIRILTGDKVTVEMTPYDLTKGRIIF
type: DOMAIN
name: RNA-binding_domain_S1_IF1
description: RNA-binding domain, S1, IF1 type

phrase: MAKEDSIEMQGTILETLPNTMFRVELENGHVLTAHISGKMRKNYIRILTGDKVTVEMTPYDLTKGRIIFRA
type: DOMAIN
name: RNA-binding_domain_S1_IF1
description: RNA-binding domain, S1, IF1 type
Protein sequence:
MKDPIDLYMNTLVPMVVEQTSRGERAYDIYSRMLKERIIFLSGPVHDGMSSLICAQLLFLEAENPSKEIAMYINSPGGVVTSGLSIYDTMQYIRPKVSTLVIGQAASMGSLLLTAGEKGMRFSLPNSRVMVHQPSGGYQGQATDIMIHARETEKLKRRLNEIYVRHTGQDLETVEAALERDNFMSAEDAKAWGLIDEILESRNRPDDTAK

Annotated regions:
phrase: TLVIGQAASMG
type: ACTIVE_SITE
name: ClpP_Ser_AS
description: ClpP, Ser active site

phrase: RFSLPNSRVMVHQ
type: ACTIVE_SITE
name: ClpP_His_AS
description: ClpP, histidine active site
Protein sequence:
MADLSVNIGKLQMKNPVMTASGTFGYGEEFADFIDITRIGGIIVKGTTLHKREGNPYPRMAETPSGMLNAVGLQNKGVEYFSNHIYPRIKDIQTHMIVNVSGSAIEDYVKTAEIINELDKIPAIELNISCPNVKQGGMAFGVTTKGVSEVVQAVRSAYKKTLIVKLSPNVTDIAEMARAAEANGADSVSLINTLLGMAIDAERKRPILSTVTGGMSGAAVKPIALRMVWQVAKAVNIPVIGLGGIMNWKDAVEFMLAGASAIQIGTANFIDPAITIKVIDGINDYLERHGCKSVSEIIGALEV

Annotated regions:
phrase: VIGLGGIMNWKDAVEFMLAG
type: CONSERVED_SITE
name: Dihydroorotate_DH_CS
description: Dihydroorotate dehydrogenase, conserved site

phrase: LSVNIGKLQMKNPVMTASGTFGYGEEFADFIDITRIGGIIVKGTTLHKREGNPYPRMAETPSGMLNAVGLQNKGVEYFSNHIYPRIKDIQTHMIVNVSGSAIEDYVKTAEIINELDKIPAIELNISCPNVKQGGMAFGVTTKGVSEVVQAVRSAYKKTLIVKLSPNVTDIAEMARAAEANGADSVSLINTLLGMAIDAERKRPILSTVTGGMSGAAVKPIALRMVWQVAKAVNIPVIGLGGIMNWKDAVEFMLAGASAIQIGTANFIDPAITIKVIDGINDYLERHGCKSVSEII
type: DOMAIN
name: Dihydroorotate_DH_I
description: Dihydroorotate dehydrogenase class I, catalytic

phrase: LSVNIGKLQMKNPVMTASGTFGYGEEFADFIDITRIGGIIVKGTTLHKREGNPYPRMAETPSGMLNAVGLQNKGVEYFSNHIYPRIKDIQTHMIVNVSGSAIEDYVKTAEIINELDKIPAIELNISCPNVKQGGMAFGVTTKGVSEVVQAVRSAYKKTLIVKLSPNVTDIAEMARAAEANGADSVSLINTLLGMAIDAERKRPILSTVTGGMSGAAVKPIALRMVWQVAKAVNIPVIGLGGIMNWKDAVEFMLAGASAIQIGTANFIDPAITIKVIDGINDY
type: DOMAIN
name: Dihydroorotate_DH_cat
description: Dihydroorotate dehydrogenase, catalytic

phrase: GGIIVKGTTLHKREGNPYP
type: CONSERVED_SITE
name: Dihydroorotate_DH_CS
description: Dihydroorotate dehydrogenase, conserved site
Protein sequence:
MRLIFAGTPEPAVVVLSRLLESEHEVVAVLTRPDARRGRGRTLHPSPVSELAQQHGIEVLTPATIKPNTPDGDAFRARLTELAPDCVPVVAYGNLITEDLLQAVPHGWINLHFSLLPRWRGAAPVQAAIAAGDTSTGATTFRIDKGLDTGQILGVIHEPIQSTDTADDLLTRLAYSGADLLVNTMDNLAQGIATYSEQIGTATYAPKITTEDARIQWTHPAEAVDKHIRAVTPGPGAWSLLGDQRFKIGPVSVAEESDLQPGHMRIEKNRVLVGTGDLNIELDQIQPQGKKRMKASDWARGLQNTEGLVLS

Annotated regions:
phrase: EDARIQWTHPAEAVDKHIRAVTPGPGAWSLLGDQRFKIGPVSVAEESDLQPGHMRIEKNRVLVGTGDLNIELDQIQPQGKKRMK
type: DOMAIN
name: Met-tRNA-FMT_C
description: Methionyl-tRNA formyltransferase, C-terminal domain

phrase: RLIFAGTPEPAVVVLSRLLESEHEVVAVLTRPDARRGRGRTLHPSPVSELAQQHGIEVLTPATIKPNTPDGDAFRARLTELAPDCVPVVAYGNLITEDLLQAVPHGWINLHFSLLPRWRGAAPVQAAIAAGDTSTGATTFRIDKGLDTGQILGVIHEPIQSTDTADDLLTRLAYSGADLLV
type: DOMAIN
name: Formyl_transf_N
description: Formyl transferase, N-terminal

phrase: KITTEDARIQWTHPAEAVDKHIRAVTPGPGAWSLLGDQRFKIGPVSVAEESDLQPGHMRIEKNRVLVGTGDLNIELDQIQPQGKKRMKASDWARG
type: DOMAIN
name: Formyl_trans_C
description: Formyl transferase, C-terminal

phrase: MRLIFAGTPEPAVVVLSRLLESEHEVVAVLTRPDARRGRGRTLHPSPVSELAQQHGIEVLTPATIKPNTPDGDAFRARLTELAPDCVPVVAYGNLITEDLLQAVPHGWINLHFSLLPRWRGAAPVQAAIAAGDTSTGATTFRIDKGLDTGQILGVIHEPIQSTDTADDLLTRLAYSGADLLVNTMDNLAQGIATYSEQIGTATYAPK
type: DOMAIN
name: Met-tRNA-FMT_N
description: Methionyl-tRNA formyltransferase, N-terminal domain
Protein sequence:
MPLFALGINHQTASVALREKVAFSADLLLDAYQALLAQPTVLEAVIVSTCNRTEIYCHLKQDNCDEVIKWLCSFHQIEDHKLRPSLYCYSEYQAIQHLFRVSCGLDSLVLGEPQILGQIKQAFATAKQAKGVDKIVQKWFQHTFTVAKRVRTETQIGANAISVAFAAVCLAKQIFSDLSQSRVLLIGAGETIELVGKYLIEHQVPNITIANRTLSRAMALVEQFDAQAITLGEIPNHLAQADIIISSTASPLPIIGKGMVERALKARRNRPMLFIDIAVPRDIEAEVSELRDIYLYSVDDLQGIIEENKQARQVAALEAEKIIDGCIVDFISWIESLKAVESIRTYRQNSEQLRDDLLNRASAALQNGEEAENVLKELAFKLTNKLIHHPSLALNETARSGNDDELILLRNALGLSKKD

Annotated regions:
phrase: LGINHQTASVALREKVAFSADLLLDAYQALLAQPTVLEAVIVSTCNRTEIYCHLKQDNCDEVIKWLCSFHQIEDHKLRPSLYCYSEYQAIQHLFRVSCGLDSLVLGEPQILGQIKQAFATAKQAKGVDKIVQKWFQHTFTVAKRVRTE
type: DOMAIN
name: 4pyrrol_synth_GluRdtase_N
description: Glutamyl-tRNA reductase, N-terminal

phrase: HLFRVSCGLDSLVLGEPQILGQI
type: CONSERVED_SITE
name: GluRdtase_CS
description: Glutamyl-tRNA reductase, conserved site

phrase: LAKQIFSDLSQSRVLLIGAGETIELVGKYLIEHQVPNITIANRTLSRAMALVEQFDAQAITLGEIPNHLAQADIIISSTASPLPIIGKGMVERALKARRNRPMLFIDIAVPRDIEAEVSELRDIYLYSVDDLQG
type: DOMAIN
name: Shikm_DH/Glu-tRNA_Rdtase
description: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase

phrase: EAEKIIDGCIVDFISWIESLKAVESIRTYRQNSEQLRDDLLNRASAALQNGEEAENVLKELAFKLTNKLIHHPSLALNETARSGNDDELILLR
type: DOMAIN
name: 4pyrrol_synth_GluRdtase_dimer
description: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain
Protein sequence:
MARENKKELIGKVVSDKMSKTIVVEIVQRKMHPIYHKYLKVSKKVKAHDEKEVSKVGDKVKIIEVRPISKDKRWALVEVLEKLK

Annotated regions:
phrase: GDKVKIIEVRPI
type: CONSERVED_SITE
name: Ribosomal_uS17_CS
description: Small ribosomal subunit protein uS17, conserved site
Protein sequence:
MVKVYYDADANLEFLKGKKIAVLGYGSQGHAQAQSLRDSGLDVVVGLRKDSARWSKAEADGLQVATVPDACAQAEVIQVLLPDEIQGRVYAEEIEPYLSEGKALMFSHGFNIHFGQIVPPKNVDVFLVAPKSPGHLVRRMYAEGKGVPGLVAVHQDYTGKAKDIALAYAKGIGCTKAGVFETSFREETETDLFGEQAVLCGGVSELIKAGFDTLVEAGYAPEMAYFECLHELKLIVDLIYEGGLSRMRYSVSNTAEYGDYMIGPRIVNEETREEMRQVLMEIQDGTFARNWMLENQVKSPQFNAVRKMEQEHPIEEVGARLREMMPWLKK

Annotated regions:
phrase: LKGKKIAVLGYGSQGHAQAQSLRDSGLDVVVGLRKDSARWSKAEADGLQVATVPDACAQAEVIQVLLPDEIQGRVYAEEIEPYLSEGKALMFSHGFNIHFGQIVPPKNVDVFLVAPKSPGHLVRRMYAEGKGVPGLVAVHQDYTGKAKDIALAYAKGIGCTKA
type: DOMAIN
name: KARI_N
description: Ketol-acid reductoisomerase, N-terminal

phrase: SFREETETDLFGEQAVLCGGVSELIKAGFDTLVEAGYAPEMAYFECLHELKLIVDLIYEGGLSRMRYSVSNTAEYGDYMIGPRIVNEETREEMRQVLMEIQDGTFARNWMLENQVKSPQFNAVRKMEQEHPIEEVGARLREMMPW
type: DOMAIN
name: KARI_C
description: Ketol-acid reductoisomerase, C-terminal

phrase: FREETETDLFGEQAVLCGGVSELIKAGFDTLVEAGYAPEMAYFECLHELKLIVDLIYEGGLSRMRYSVSNTAEYGDYMIGPRIVNEETREEMRQVLMEIQDGTFARNWMLENQVKSPQFNAVRKMEQEHPIEEVGARLREMMP
type: DOMAIN
name: KARI_C
description: Ketol-acid reductoisomerase, C-terminal

phrase: VKVYYDADANLEFLKGKKIAVLGYGSQGHAQAQSLRDSGLDVVVGLRKDSARWSKAEADGLQVATVPDACAQAEVIQVLLPDEIQGRVYAEEIEPYLSEGKALMFSHGFNIHFGQIVPPKNVDVFLVAPKSPGHLVRRMYAEGKGVPGLVAVHQDYTGKAKDIALAYAKGIGCTKAGVFE
type: DOMAIN
name: KARI_N
description: Ketol-acid reductoisomerase, N-terminal
Protein sequence:
MMAVREVGPCVYKTYCVFITTLLFGLSSAQYHGEKGISVPEHGFCQPISIPLCTDIQYNQTIMPNLLGHTNQEDAGLEVHQFYPLVKVQCSQDLKFFLCSMYAPVCTVLEQAIPPCRTLCERARQGCEALMNKFGFQWPERLRCENFPVHGAGEICVGQNKSDPDVPTTNPTPYIPEPFSPRIHTPRQNQAFTCPLQLTVPSYLNYHFLGAKNCGAPCEHKQPYGLMYFKEEEVRFGRLWVGIWSILCCVSTLFTVLTYLVDMRRFHYPERPIIFLSGCYFMVAVAYAAGFLLEDKVVCIDKFRDDAFKTVAQGTKKEGCTILFMVLYFFGMASSIWWVILSLTWFLSAGMKWGHEAIEANSQYFHLAAWAVPAVKTITILALGQVDGDLLTGVCYVGIYNVDALRGFVLAPLFVYLFIGTSFLLAGFVSLFRIRTIMKHDGTKTEKLEKLMVRIGVFSVLYTVPATIVIACYFYEQAFREQWEKTWHMQTCKRFAVPCPNNNFAPMTPDFTVFMIKYLMTMIVGITSGFWIWSGKTLQSWRRFYKRLGNNQGETTV

Annotated regions:
phrase: PEHGFCQPISIPLCTDIQYNQTIMPNLLGHTNQEDAGLEVHQFYPLVKVQCSQDLKFFLCSMYAPVCTVLEQAIPPCRTLCERARQGCEALMNKFGFQWPERLRCENFPVHGAGEICVG
type: DOMAIN
name: Frizzled_dom
description: Frizzled domain

phrase: YFKEEEVRFGRLWVGIWSILCCVSTLFTVLTYLVDMRRFHYPERPIIFLSGCYFMVAVAYAAGFLLEDKVVCIDKFRDDAFKTVAQGTKKEGCTILFMVLYFFGMASSIWWVILSLTWFLSAGMKWGHEAIEANSQYFHLAAWAVPAVKTITILALGQVDGDLLTGVCYVGIYNVDALRGFVLAPLFVYLFIGTSFLLAGFVSLFRIRTIMKHDGTKTEKLEKLMVRIGVFSVLYTVPATIVIACYFYEQAFREQWEKTWHMQTCKRFAVPCPNNNFAPMTPDFTVFMIKYLMTMIVGITSGFWIWSGKTLQSWRRFYK
type: DOMAIN
name: Frizzled/Smoothened_7TM
description: Frizzled/Smoothened, 7TM

phrase: FCQPISIPLCTDIQYNQTIMPNLLGHTNQEDAGLEVHQFYPLVKVQCSQDLKFFLCSMYAPVCTVLEQAIPPCRTLCERARQGCEALMNKFGFQWPERLRCENFPVHGAGEICVGQN
type: DOMAIN
name: Frizzled_dom
description: Frizzled domain

phrase: CQPISIPLCTDIQYNQTIMPNLLGHTNQEDAGLEVHQFYPLVKVQCSQDLKFFLCSMYAPVCTVLEQAIPPCRTLCERARQGCEALMNKFGFQWPERLRCENFP
type: DOMAIN
name: Frizzled_dom
description: Frizzled domain

phrase: WVGIWSILCCVSTLFTVLTYLV
type: DOMAIN
name: Frizzled/Smoothened_7TM
description: Frizzled/Smoothened, 7TM

phrase: YPERPIIFLSGCYFMVAVAYAA
type: DOMAIN
name: Frizzled/Smoothened_7TM
description: Frizzled/Smoothened, 7TM

phrase: ILFMVLYFFGMASSIWWVILSLTW
type: DOMAIN
name: Frizzled/Smoothened_7TM
description: Frizzled/Smoothened, 7TM

phrase: FHLAAWAVPAVKTITILALGQVD
type: DOMAIN
name: Frizzled/Smoothened_7TM
description: Frizzled/Smoothened, 7TM

phrase: LAPLFVYLFIGTSFLLAGFVSL
type: DOMAIN
name: Frizzled/Smoothened_7TM
description: Frizzled/Smoothened, 7TM

phrase: LMVRIGVFSVLYTVPATIVIA
type: DOMAIN
name: Frizzled/Smoothened_7TM
description: Frizzled/Smoothened, 7TM

phrase: VFMIKYLMTMIVGITSGFWI
type: DOMAIN
name: Frizzled/Smoothened_7TM
description: Frizzled/Smoothened, 7TM

phrase: MYFKEEEVRFGRLWVGIWSILCCVSTLFTVLTYLVDMRRFHYPERPIIFLSGCYFMVAVAYAAGFLLEDKVVCIDKFRDDAFKTVAQGTKKEGCTILFMVLYFFGMASSIWWVILSLTWFLSAGMKWGHEAIEANSQYFHLAAWAVPAVKTITILALGQVDGDLLTGVCYVGIYNVDALRGFVLAPLFVYLFIGTSFLLAGFVSLFRIRTIMKHDGTKTEKLEKLMVRIGVFSVLYTVPATIVIACYFYEQAFREQWEKTWHMQTCKRFAVPCPNNNFAPMTPDFTVFMIKYLMTMIVGITSGFWIWSGKTLQSWRRFYKRLGN
type: DOMAIN
name: Frizzled/Smoothened_7TM
description: Frizzled/Smoothened, 7TM

phrase: GRLWVGIWSILCCVSTLFTVLTYLVDMRRFHYPERPIIFLSGCYFMVAVAYAAGFLLEDKVVCIDKFRDDAFKTVAQGTKKEGCTILFMVLYFFGMASSIWWVILSLTWFLSAGMKWGHEAIEANSQYFHLAAWAVPAVKTITILALGQVDGDLLTGVCYVGIYNVDALRGFVLAPLFVYLFIGTSFLLAGFVSLFRIRTIMKHDGTKTEKLEKLMVRIGVFSVLYTVPATIVIACYFYEQAFREQWEKTWHMQTCKRFAVPCPNNNFAPMTPDFTVFMIKYLMTMIVGITSGFWIWSGKTLQ
type: DOMAIN
name: GPCR_2-like_7TM
description: GPCR, family 2-like, 7TM
Protein sequence:
MDLLLLEKTLLALFLAAITAITISKLRGKPFKLPPGPFPVPVFGNWLQVGDDLNHRNLTDLAKRFAEILLLRMEQRNLVVISSPELAKEVLHTQGVEFGSRTRNVVFDIFTGKGQDIVFTVYGEHWRKMRRIMTVPFFTNKVVQQYRFGWESEAASVVDDVKKNSKASVNGIVIRRRLQLMMYNIMYRIMFDRRFESEEDPLFVKLKALNGERSRLAQSFEYNYGDFIPILRPFLKGYLKVCKEVKDRRLQLFKDYFVDERKKLGSTKSTYNEGLKCAIDHILDAQKKGEINDDNVLYIVENINVAAIETTLWSIEWGIAELVNHQEIQNKLREEMDKVLGPGHQVTEPDLEKLPYLQAVIKETLRLRMAIPLLVPHMNLHDAKLGGFDIPAESKILVNAWWLANNPALWKKPEEFRPERFLEEEAHVEANGNDFRYLPFGVGRRSCPGIILALPILGITIGRLVQNFELLPPPGQSKIDTSEKGGQFSLHILKHSTIVAKPRAF

Annotated regions:
phrase: FGVGRRSCP
type: CONSERVED_SITE
name: Cyt_P450_CS
description: Cytochrome P450, conserved site
Protein sequence:
MQSLIKYQPKSPLKYLSSYFGDRKKNLFKLVLLGAPGAGKGTQAKHLVSKYSLKHISPGNLLREEMNRNSPITAQIKDYVSKGQLVPDSIVIKLIENHIATIGDSNWLLDGFPRSESQAAALRASPDLFPTHIVELKVDQEAVVQRLGGRRFDPITGNTYHIIYDPPPPDIADRVVVRTDDREDVIRERFRVYAENKDLVDKVFNHSVVSINCEGQTIDEVSLQLDRVLSMPSTIHPSIIMPERNKKQ

Annotated regions:
phrase: WLLDGFPRSES
type: CONSERVED_SITE
name: Adenylat_kinase_CS
description: Adenylate kinase, conserved site
Protein sequence:
MALENLLHPTNIKIDEYAKNATKFSFEALERGVGYTLGFALKQTMLYSIAGACVTSIKINDGKVTSLEDVIPCDETVADIILNVKSLPVTLAEGVETGTITFELSGSEEEIFSEEAKLSEGLAITEEVFICSYNGGKKLKIEAKVEKGVGFRPAQDNFKDGEFLLDATFSPVVFCDFEIKDARVGRRTDLDKLELNIKTNGNVNCEEALRLAATKIQNQLRNILDIEEINKGIFVEDPTKDINPILLKHVEELNLTARSSNCLKAVNIRLIGELVQKTENELLKAPNFGKKSLTEIKDKLSELGLSLGTLIENWPQDL

Annotated regions:
phrase: TKDINPILLKHVEELNLTARSSNCLKAVNIRLIGELVQKTENELLKAPNFGKKSLTEIKDKLS
type: DOMAIN
name: RNAP_asu_C
description: RNA polymerase, alpha subunit, C-terminal

phrase: CDETVADIILNVKSLPVTLAEGVETGTITFELSGSEEEIFSEEAKLSEGLAITEEVFICSYNGGKKLKIEAKVEKGVGFRPAQDNFKDGEFLLDATF
type: DOMAIN
name: DNA-dir_RNA_pol_insert
description: DNA-directed RNA polymerase, insert domain

phrase: LERGVGYTLGFALKQTMLYSIAGACVTSIKINDGKVTSLEDVIPCDETVADIILNVKSLPVTLAEGVETGTITFELSGSEEEIFSEEAKLSEGLAITEEVFICSYNGGKKLKIEAKVEKGVGFRPAQDNFKDGEFLLDATFSPVVFCDFEIKDARVGRRTDLDKLELNIKTNGNVNCEEALRLAATKIQNQ
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: ATKFSFEALERGVGYTLGFALKQTMLYSIAGACVTSIKINDGKVTSLEDVIPCDETVADIILNVKSLPVTLAEGVETGTITFELSGSEEEIFSEEAKLSEGLAITEEVFICSYNGGKKLKIEAKVEKGVGFRPAQDNFKDGEFLLDATFSPVVFCDFEIKDARVGRRTDLDKLELNIKTNGNVNCEEALRLAATKIQNQLRNILD
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type
Protein sequence:
METFRTLLAKAALGNGISSTAYDTAWVAKLGQLDDELSDLALNWLCERQLPDGSWGAEFPFCYEDRLLSTLAAMISLTSNKHRRRRAAQVEKGLLALKNLTSGAFEGPQLDIKDATVGFELIAPTLMAEAARLGLAICHEESILGELVGVREQKLRKLGGSKINKHITAAFSVELAGQDGVGMLDVDNLQETNGSVKYSPSASAYFALHVKPGDKRALAYISSIIQAGDGGAPAFYQAEIFEIVWSLWNLSRTDIDLSDPEIVRTYLPYLDHVEQHWVRGRGVGWTGNSTLEDCDTTSVAYDVLSKFGRSPDIGAVLQFEDADWFRTYFHEVGPSISTNVHVLGALKQAGYDKCHPRVRKVLEFIRSSKEPGRFCWRDKWHRSAYYTTAHLICAASNYDDALCSDAIGWILNTQRPDGSWGFFDGQATAEETAYCIQALAHWQRHSGTSLSAQISRAGGWLSQHCEPPYAPLWIAKTLYCSATVVKAAILSALRLVDESNQ

Annotated regions:
phrase: TNVHVLGALKQAGYDKCHPRVRKVLEFIRSSKEPGRFCWRDKWHRSAYYTTAHLICAASNYDDALCSDAIGWILNTQRPDGSW
type: DOMAIN
name: SQ_cyclase_C
description: Squalene cyclase, C-terminal
Protein sequence:
MIIEIITIFPKFFDSFFEHSIIKRAIKKNKIIFQVHDLRNYSNNKHNQVDDSPYGGGAGMLLKFPPFYECLKKIKKSFSKVILLSPQGTLLNQKMAFEYVNEIKHLIILNGNYEGIDARILNYIDAEISIGDYILTGGEIATIVLIDVLVRLLPGVINSESYLEDSHQKDLLKYPQYTKPKIYQNQKVPEILLSGNHKNIKDWRYNQSLKNTFFKRPDILKKINLTEKQQKILLEIKKKLKEG

Annotated regions:
phrase: KRAIKKNKIIFQVHDLRNYSNNKHNQVDDSPYGGGAGMLLKFPPFYECLKKIKKSFSKVILLSPQGTLLNQKMAFEYVNEIKHLIILNGNYEGIDARILNYIDAEISIGDYILTGGEIATIVLIDVLVRLLPGVINSESYLEDSHQKDLLKYPQYTKPKIYQNQKVPEILLSGNHKNIKDWRYNQSLKNTFFKR
type: DOMAIN
name: tRNA_MeTrfase_TRMD/TRM10
description: tRNA methyltransferase TRMD/TRM10-type domain
Protein sequence:
MSSLVSNEVYDVESGLRKVIESAKANFCESVDVAINLNINSSKSDEQVRGCVVLPKGLGREVRVAVFAKGGHLEMAREAMANIVGDEELIEEVKKKQCKLDVDWCLTTPDFMASVSSIAKILGPKGLMPNPKFNTVTFELAKAIKIIKSGQIRFKSDKTGIVHAKIGNVKFSIEDLLENFNAVINAVKQCKPASIKGLYFKDVFVISTMGKSVKVENLNN

Annotated regions:
phrase: MASVSSIAKILGPKGLMP
type: CONSERVED_SITE
name: Ribosomal_uL1_CS
description: Large ribosomal subunit protein uL1, conserved site
Protein sequence:
MRTKAYALALKGMFTMSPERIHHIITRGMQLVQAISPLRRAVGSILPVNDPILRQEVFGVTFPQPLGLAAGFDKNGEAPDVWAAFGFGYAELGTVTASPQPGNPTPRLFRLPADKAILNRMGFNNLGAAEVAKNLKRRKSDAVIGINIGKTKVVASKDAVNDYRRSALLLGNLADYLVINVSSPNTPGLRDLQAVESLRPIIAAVQESTSVPVLVKIAPDLSDDDIDAVADLAVEMGIAGIVATNTTISRNGLRTPHQDVADMGAGGISGAPVAQRSLEVLERLYAHVGTEMVLIGVGGISTPQQAWERIAAGATLLQGYTGMIYGGPDWIRDIHLGIAAQLRAHDLSSIDQAVGSKLPWTLQ

Annotated regions:
phrase: GYAELGTVTASPQPGNPTP
type: CONSERVED_SITE
name: Dihydroorotate_DH_CS
description: Dihydroorotate dehydrogenase, conserved site

phrase: LIGVGGISTPQQAWERIAAG
type: CONSERVED_SITE
name: Dihydroorotate_DH_CS
description: Dihydroorotate dehydrogenase, conserved site

phrase: LRQEVFGVTFPQPLGLAAGFDKNGEAPDVWAAFGFGYAELGTVTASPQPGNPTPRLFRLPADKAILNRMGFNNLGAAEVAKNLKRRKSDAVIGINIGKTKVVASKDAVNDYRRSALLLGNLADYLVINVSSPNTPGLRDLQAVESLRPIIAAVQESTSVPVLVKIAPDLSDDDIDAVADLAVEMGIAGIVATNTTISRNGLRTPHQDVADMGAGGISGAPVAQRSLEVLERLYAHVGTEMVLIGVGGISTPQQAWERIAAGATLLQGYTGMIYGGPDWIRDIHLGIAA
type: DOMAIN
name: Dihydroorotate_DH_cat
description: Dihydroorotate dehydrogenase, catalytic
Protein sequence:
MDIRNEFLQFFQNKGHAVYPSMPLVPNDATLLFTNAGMVQFKDIFTGIVPRPSIPRAASSQLCMRAGGKHNDLENVGYTARHHTLFEMLGNFSFGDYFKEEAILFAWEFVTKNLGFKPKDLYISVHEKDDEAVKLWEKFVPVDRIKKMGDKDNFWQMGDSGPCGPCSEIYIDQGEKHFKGSEDYFGGEGDRFLEIWNLVFMQYERSNDGVLSPLPKPSIDTGMGLERVQALLEHKLNNFDSSLFAPLMEEISELTSLDYASEFQPSFRVVADHARAVAFLLAQGVHFNKEGRGYVLRRILRRALRHGYLMGLKEAFLYKVVGVVCEQFANTHAYLKESKEMVVKECFEEEEHFLETLESGMELFNLSLKHLNENKIFDGKIAFKLYDTFGFPLDLTNDMLRSHGACADMQGFELCMQEQVKRSKASWKGKQNNADFSAILNAYAPNVFVGYETTECSAKVLGFFDSDFKEITDANPNQEVWVLLEKTPFYAEGGGAIGDRGALFKDNGEVAIVLDTKNFFGLNFSLLEIKKALKKGDQVIAQVSDERFEIAKHHSATHLLQSALREVLGSHVSQAGSLVESKRLRFDFSHAKALNDEELEKVEDLVNAQIFKHLNSQVEHMPLNQAKDKGALALFSEKYAENVRVVSFKEASIELCGGIHVENTGLIGGFRIVKESGVSSGVRRIEAVCGKAFYQLAKEENKELKNAKTLLKNNDVIAGINKLKESVKNSQKAPVSMDLPVEKIHGVNLVVGVVEQGDIKEMIDRLKSKHERLLAMVFKKENERITLACGVKNAPIKANVWANEVAQILGGKGGGRGDFASAGGKDIENLQAALNLAKNTALKALEG

Annotated regions:
phrase: VGVVEQGDIKEMIDRLKSKHERLLAMVFKKENERITLACGVKNAPIKANVWANEVAQILGGKGGGRGDFASAGGKDIENLQAALNLAK
type: DOMAIN
name: DHHA1_dom
description: DHHA1 domain

phrase: MDIRNEFLQFFQNKGHAVYPSMPLVPNDATLLFTNAGMVQFKDIFTGIVPRPSIPRAASSQLCMRAGGKHNDLENVGYTARHHTLFEMLGNFSFGDYFKEEAILFAWEFVTKNLGFKPKDLYISVHEKDDEAVKLWEKFVPVDRIKKMGDKDNFWQMGDSGPCGPCSEIYIDQGEKHFKGSEDYFGGEGDRFLEIWNLVFMQYERSNDGVLSPLPKPSIDTGMGLERVQALLEHKLNNFDSSLFAPLMEEISELTSLDYASEFQPSFRVVADHARAVAFLLAQGVHFNKEGRGYVLRRILRRALRHGYLMGLKEAFLYKVVGVVCEQFANTHAYLKESKEMVVKECFEEEEHFLETLESGMELFNLSLKHLNENKIFDGKIAFKLYDTFGFPLDLTNDMLRSHGACADMQGFELCMQEQVKRSKASWKGKQNNADFSAILNAYAPNVFVGYETTECSAKVLGFFDSDFKEITDANPNQEVWVLLEKTPFYAEGGGAIGDRGALFKDNGEVAIVLDTKNFFGLNFSLLEIKKALKKGDQVIAQVSDERFEIAKHHSATHLLQSALREVLGSHVSQAGSLVESKRLRFDFSHAKALNDEELEKVEDLVNAQIFKHLNSQVEHMPLNQAKDKGALALFSEKYAENVRVVSFKEASIELCGGIHVENTGLIGGFRIVKESGVSSGVRRIEAVCGKAFYQLAK
type: DOMAIN
name: Ala-tRNA-synth_IIc_core
description: Alanyl-tRNA synthetase, class IIc, core domain

phrase: DIRNEFLQFFQNKGHAVYPSMPLVPNDATLLFTNAGMVQFKDIFTGIVPRPSIPRAASSQLCMRAGGKHNDLENVGYTARHHTLFEMLGNFSFGDYFKEEAILFAWEFVTKNLGFKPKDLYISVHEKDDEAVKLWEKFVPVDRIKKMGDKDNFWQMGDSGPCGPCSEIYIDQGEKHFKGSEDYFGGEGDRFLEIWNLVFMQYERSNDGVLSPLPKPSIDTGMGLERVQALLEHKLNNFDSSLFAPLMEEISELTSLDYASEFQPSFRVVADHARAVAFLLAQGVHFNKEGRGYVLRRILRRALRHGYLMGLKEAFLYKVVGVVCEQFANTHAYLKESKEMVVKECFEEEEHFLETLESGMELFNLSLKHLNENKIFDGKIAFKLYDTFGFPLDLTNDMLRSHGACADMQGFELCMQEQVKRSKASWKGKQNNADFSAILNAYAPNVFVGYETTECSAKVLGFFDSDFKEITDANPNQEVWVLLEKTPFYAEGGGAIGDRGALFKDNGEVAIVLDTKNFFGLNFSLLEIKKALKKGDQVIAQVSD
type: DOMAIN
name: Ala-tRNA-synth_IIc_N
description: Alanyl-tRNA synthetase, class IIc, N-terminal

phrase: VRVVSFKEASIELCGGIHVENTGLIGGFRIVKESGVSSGVRRI
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD

phrase: VRVVSFKEASIELCGGIHVENTGLIGGFRIVKESGVSSGVRRI
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD
Protein sequence:
MALALCLQALCSLGGWLSLYVSFCRLNKHRSYEWNCRLVTFTHGILSIGLSAYIGFIDGPWPFTHPGSPNTPLQVHVLCLTLGYFIFDLGWCIYFRSEGPLMLAHHTLSILGIIVALVLGESGTEVNAVLFGSEITNPLLQIRWFLRETGHYHSFTGDVVDFLFVALFTGVRIGVGACLLFCEMVSPTPKWFVKVGGVAMYVVSWCFMFSIWRFAWRKSIKKYHTWRSRWSEERQLRLNGHLKTH

Annotated regions:
phrase: HRSYEWNCRLVTFTHGILSIGLSAYIGFIDGPWPFTHPGSPNTPLQVHVLCLTLGYFIFDLGWCIYFRSEGPLMLAHHTLSILGIIVALVLGESGTEVNAVLFGSEITNPLLQIRWFLRETGHYHSFTGDVVDFLFVALFTGVRIGVGACLLFCEMVSPTPKWFVKVGGVAMYVV
type: DOMAIN
name: TLC-dom
description: TRAM/LAG1/CLN8 homology domain

phrase: HRSYEWNCRLVTFTHGILSIGLSAYIGFIDGPWPFTHPGSPNTPLQVHVLCLTLGYFIFDLGWCIYFRSEGPLMLAHHTLSILGIIVALVLGESGTEVNAVLFGSEITNPLLQIRWFLRETGHYHSFTGDVVDFLFVALFTGVRIGVGACLLFCEMVSPTPKWFVKVGGVAMYVVSWCFMFSIWRFAWRKSIKKYH
type: DOMAIN
name: TLC-dom
description: TRAM/LAG1/CLN8 homology domain

phrase: EWNCRLVTFTHGILSIGLSAYIGFIDGPWPFTHPGSPNTPLQVHVLCLTLGYFIFDLGWCIYFRSEGPLMLAHHTLSILGIIVALVLGESGTEVNAVLFGSEITNPLLQIRWFLRETGHYHSFTGDVVDFLFVALFTGVRIGVGACLLFCEMVSPTPKWFVKVGGVAMYVVSWCF
type: DOMAIN
name: TLC-dom
description: TRAM/LAG1/CLN8 homology domain
Protein sequence:
MPVVTTDAESETGIPKSLSNEPPSETMEEIEHTCPQPRLTLTAPAPFADETNCQCQAPHEKLTIAQARLGTPADRPVRVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTVMNEAERYEALRHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDIPYSSAGSDDVYKHIKEAGMFVPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKRYRFQNQVDKMKEKVKNVEERSKEFVNRVEEKSHDLIQKWEEKSREFIGNFLELFGPDGAWKQMFQERSSRMLQALSPKQSPVSSPTRSRSPSRSPSPTFSWLPLKTSPPSSPKAASASISSMSEGDEDEK

Annotated regions:
phrase: RPVRVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTVMNEAERYEALRHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDIPYSSAGSDDVYKHIKEAGMFVPTQRTEGISTSDIITRIVRDYDVYARRNLQR
type: DOMAIN
name: CCT
description: CTP:phosphocholine cytidylyltransferase domain

phrase: YADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTVMNEAERYEALRHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDIPYSSAGSDDVYKHIKEAGMFVPTQRTEGISTSDIIT
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: RVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTVMNEAERYEALRHCRYVDE
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain
Protein sequence:
MKGQQKTAETEEGTVQIQEGAVATGEDPTSVAIASIQSAATFPDPNVKYVFRTENGGQVMYRVIQVSEGQLDGQTEGSGAISGYPATQSMTQAVIQGAFTSDDAVDTEGAAAETHYTYFPSTAVGDGSGGTTSGSTTAVVTTQGSEALLGQATPPSTGQFFVMMSPQEVLQGGSQRSIAPRTHPYSPKSEAPRTTRDEKRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDYIQELRQSNHRLSEELQGLDQLQLDNDVLRQQVEDLKNKNLLLRAQLRHHGLEVVIKNDSN

Annotated regions:
phrase: NEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDYIQELRQSNH
type: DOMAIN
name: bHLH_dom
description: Myc-type, basic helix-loop-helix (bHLH) domain

phrase: KRRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDYIQE
type: DOMAIN
name: bHLH_dom
description: Myc-type, basic helix-loop-helix (bHLH) domain

phrase: RRAQHNEVERRRRDKINNWIVQLSKIIPDCSMESTKSGQSKGGILSKACDYIQEL
type: DOMAIN
name: bHLH_dom
description: Myc-type, basic helix-loop-helix (bHLH) domain
Protein sequence:
MSWSKACRGTRISSYLENLHRTSQYPRTILCSRYYTHGACKSNEHYLRSKRVFWGSSSSWSLNSHSATAKSMLDSAHRQYSTHSPSETKSQKMLYYLTAVVFGMVGLTYAAVPLYRTFCQATGYGGTVQRKETVEEKIARHSESGTVTEREIVVQFNADVADGMQWKFTPTQREVRVKPGESALAFYTAENKSSAPITGVSTYNVTPMKAGVYFNKIQCFCFEEQRLLPGEQIDMPVFFYIDPEFETDPRMDGINNLILSYTFFKVSEENTTETVNNNNSVPVQETN

Annotated regions:
Protein sequence:
MKKIPLIILTGPTAVGKTDLSIKLAKDMNAEIISADSMQIYEYMDIGSAKVTEKEMQGVKHYLIDEVKPDYPFSVSEFQQRAKKYIHEINKKEKCVLVTGGTGLYLNSLIYNMDFAQSDANNELREELQKQLAEKGIDYMHNKLKELDEESANRIHKNNTKRVIRALEVCLSGKKMNDFSSDLKFNEEYQPIIIVLNRDREHLYQRINMRVDIMIKNGLVEEVKKLLSMGFKKDMISMQGIGYKEILKYLDGEYTYEEAIEIIKRDSRRYAKRQITWFKRYKTAKWFDLDQYENIDELKNEIILYIKDSIK

Annotated regions:
Protein sequence:
MRRTKIVVPIMLTELTELEKVSVSDYLSADIVEWRADFLSADDIFEMAPKFFEKFKESKILFTLRTVREGGNIQVSEKKYLQILQEILKFEPDYIDVEYFSHGPSFAALKNYREKIVLSYHNFDEVPTDLTSRLIKMHEEGTAFVKVAVMPERECDVLDLLQITRDMTLEYGNHFISMAMGDLGRLSRISGYLTGSCWTFAGLENSSAPGQISLKETVEILDLLENELA

Annotated regions: