nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MLQKREKVLLLRTFQGRTLRIVREHYLRPCVPCHSPLCPQPAACSHDGKLLSNDVTHYVIPDWKVVQDYLEILEFPELKGIIFMQTACQAVQHQRGRRQYNKLRNLLKDARHDCILFANEFQQCCYLPRERGESMEKWQTRSIYNAAVWYYHHCQDRMPIVMVTEDEEAIQQYGSETEGVFVISFKNYLDNFWPDLKAAHELCDSILQSRRERENESQESHGKEYPEHLPLEVLEAGIKSGRYIQGILNVNKHRAQIEAFVRLQGASSKDSDLVSDILIHGMKARNRSIHGDVVVVELLPKNEWKGRTVALCENDCDDKASGESPSEPMPTGRVVGILQKNWRDYVVTFPSKEEVQSQGKNAQKILVTPWDYRIPKIRISTQQAETLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDLEGEIATILVENSISVIPFSEAQMCEMPVNTPENPWKVSPEEEQKRKDLRKSHLVFSIDPKGCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLPSVLSADLCSLLGGVDRYAVSIMWELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGNLSVVDDIPEFKDLDEKSRQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGVEVRVQLDDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSELRECAKAKGFFIDTRSNKTLADSLDNANGPHDPIVNRLLRSMATQAMSNALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAISKDKKMEIKGNLFSNKDLEELCRHINNRNRAAQHSQKQSTELFQCMYFKDKDPATEERCISDGVIYSIRANGVLVFIPRFGIKGAAYLKNKDGLVISCGPDSCSEWKPGSLQRFQNKITSTTTDGESVTFHLFDHVTVRISIQVSRCHSDTTRLEIISNKPYKIPNTELIHQSSPLLKSELVKEVTKSVEEAQLAQEVKVNIIQEEYQEYCQTKGRSLYTLLEEIRDLALLDVSNNYGI

Annotated regions:
phrase: AGIKSGRYIQGILNVNKHRAQIEAFVRLQGASSKDSDLVSDILIHGMKARNRSIHGDVVVVELLPKNEWKGRT
type: DOMAIN
name: Rrp44_CSD1
description: Rrp44-like cold shock domain

phrase: ILVTPWDYRIPKIRISTQQAETLQDFRVVVRIDSWESTSVYPNGHFVRVLGRIGDLEGEIATILVE
type: DOMAIN
name: Dis3_CSD2
description: Dis3-like cold-shock domain 2

phrase: HYGLALDKYTHFTSPIRRYSDIVV
type: CONSERVED_SITE
name: RNase_II/R_CS
description: Ribonuclease II/R, conserved site

phrase: RKDLRKSHLVFSIDPKGCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLPSVLSADLCSLLGGVDRYAVSIMWELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGNLSVVDDIPEFKDLDEKSRQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGVEVRVQLDDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSELRECAKAKGFFIDTRSNKTLADSLDNANGPHDPIVNRLLRSMATQAMSNALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAIS
type: DOMAIN
name: RNase_II/R
description: Ribonuclease II/R

phrase: SDGVIYSIRANGVLVFIPRFGIKGAAYLKNKDGLVISCGPDSCSEWKPGSLQRFQNKITSTTTDGESVTFHLFDHVTVRISIQV
type: DOMAIN
name: RRP44_S1
description: Exosome complex exonuclease RRP44, S1 domain

phrase: RKDLRKSHLVFSIDPKGCEDVDDTLSVRTLNNGNLELGVHIADVTHFVAPNSYIDIEARTRATTYYLADRRYDMLPSVLSADLCSLLGGVDRYAVSIMWELDKASYEIKKVWYGRTIIRSAYKLFYEAAQELLDGNLSVVDDIPEFKDLDEKSRQAKLEELVWAIGKLTDIARHVRAKRDGCGALELEGVEVRVQLDDKKNIHDLIPKQPLEVHETVAECMILANHWVAKKIWESFPHQALLRQHPPPHQEFFSELRECAKAKGFFIDTRSNKTLADSLDNANGPHDPIVNRLLRSMATQAMSNALYFSTGSCAEEEFHHYGLALDKYTHFTSPIRRYSDIVVHRLLMAAI
type: DOMAIN
name: RNase_II/R
description: Ribonuclease II/R
Protein sequence:
MSIFFKPPIDIEILFDNEESRKHVDIATRSSNSSYKSMKESLPVYEDGESLGGIVTLRVRDSKKVDHLGIKVSVIGSIDMLKSHGSGNSSSKKVTSSTSSSSSNGSVDVRKNSVDQFLCQSYDLCPAGELQHSQSFPFLFRDLSKRYESYKGKNVDVAYYVKVTVMRKSTDISKIKRFWVYLYNSVTTAPNTLSANETKATTNDIAGGNYAADNASDNTQTKSTQGEAADVNQVLPISHSNNEPKPVRLDIGIENCLHIEFEYAKSQYSLKEVIVGRIYFLLTRLRIKHMELSLITRESSGLQTSNVMTDSTAIRYEIMDGSSVKGETIPIRLFLSGYDLTPNMSCNYFNVKNYLSLVIIDEDGRRYFKQSEITLYRTR

Annotated regions:
Protein sequence:
MMTEYKNTIRSEASYTGIGLHTGEISTIRFKPADKDSGIVFVRVDMPGQPEIPADIDHVVDMSRGTTIGIKDATVGTIEHVLSAIKGLNIDNIRIEIDGPEAPVADGSAIVFLNLLKKAGIVKQDAEREYFEFDEPISFSAPEENVDIVIVPSNELKITFMIDYKHPYLGTQYTWLPDLSVYEKEFAGARTFCFINEILKLKEMGLIKGGSLENALVIAEPGISDEELKHLQDVFGYHEPITVSPQGILNSHPLRYYNEFVRHKVVDLLGDIALLGVPIKGHILAARSGHKTNAELVKKLRQIQLKQQFQKQYQKKTEKDVVFDINAILKIIPHRYPFLLVDKIIDFQPGVSITGIKNVTINEPFFQGHFPGHPIMPGVLIIEGMAQAGGIMLLNQLDNPQDYVAYFASIDNVKFRKPVLPGDTLRYEMEVISLKRSLSKMHGEAYVGRTKVAEGDFMAMIQDKNK

Annotated regions:
Protein sequence:
MSILSGKRIALGVTGSIAAYKAADLASKLTQAGAQVDVILTNAAEKFIAPLTFQSVTGRRAYTDNDLWGNEAHVLHVGLSHTADLLVIAPCTANTIAKLAHGQADTLLTVIALASQAPLVIAPAMDGGMFDHPATQENLDTLRKRGAYIIEPLEGHLASGLTGKGRLPETPELIGHLRLILGRRGLLADKKVLITAGGTQEPLDPVRVLTNRSSGRQGYALAQAALDAGAQVTLITTTTALTPPVGATVVNVQTARQMLDAVLKEFSESDVLIMAAAVADFRPRKQSERKIKKEDGVPQIELEATEDILKAVADLRSRMKRKQVVAGFAAESQDLLQNASNKLQSKKLDLIAANDISAADAGFSVETNRITLLFADGRTESLSLMSKSEAAEIIVERVAALLE

Annotated regions:
phrase: LADKKVLITAGGTQEPLDPVRVLTNRSSGRQGYALAQAALDAGAQVTLITTTTALTPPVGATVVNVQTARQMLDAVLKEFSESDVLIMAAAVADFRPRKQSERKIKKEDGVPQIELEATEDILKAVADLRSRMKRKQVVAGFAAESQDLLQNASNKLQSKKLDLIAANDISAADAGFSVETNRITL
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal

phrase: KRIALGVTGSIAAYKAADLASKLTQAGAQVDVILTNAAEKFIAPLTFQSVTGRRAYTDNDLWGNEAHVLHVGLSHTADLLVIAPCTANTIAKLAHGQADTLLTVIALASQAPLVIAPAMDGGMFDHPATQENLDTLRKRGAYIIEPLEGHLASGLTGKGRLPETPELI
type: DOMAIN
name: Flavoprotein
description: Flavoprotein
Protein sequence:
MTRYIFITGGVVSSLGKGITSASLSAILEARGLKVTLLKLDPYINVDPGTMSPFQHGEVFVTNDGAETDLDLGHYERFSRAVMSQKNNFTTGRVYESVLKRERRGDYLGATIQVIPHITDEIKRRVVEGAGDADVALVEIGGTVGDIESQPFLEAVRQLRVELGSDRALFLHLTLVPFISTAGETKTKPTQHSVKELRSIGIQPDVLVCRSEHEIDESSRRKIALFTNVDIPAVISLPDTDSIYRIPSILGTAGLDEIIVNKLHLDCPKADYSEWDRVVDSQLNPEREVKLAMVGKYMELLDAYKSLNEAIIHAGIQTRTTVNISYIDSSDLMEQGVELLHDHDAILIPGGFGERGFEGKIKATKFARENNIPFLGICLGLQAAVVDYARHVANLKDANSTEFEKNCENPVIALISEWTTAAGTTEVRDENSDLGGTMRLGGQKCVLDPDSITFQCYQQKEIIERHRHRYEFNNDYLDTLNAAGLKLVGKSADGMLVEVIEIPDHPWFIGCQFHPEFTSTPRGGHPLFTGFIKAAIVCHEQLTNATTEAGSVDNLATATATANAARA

Annotated regions:
phrase: VKLAMVGKYMELLDAYKSLNEAIIHAGIQTRTTVNISYIDSSDLMEQGVELLHDHDAILIPGGFGERGFEGKIKATKFARENNIPFLGICLGLQAAVVDYARHVANLKDANSTEFEKNCENPVIALISEWTTAAGTTEVRDENSDLGGTMRLGGQKCVLDPDSITFQCYQQKEIIERHRHRYEFNNDYLDTLNAAGLKLVGKSADGMLVEVIEIPDHPWFIGCQFHPEFTSTPRGGHPLFTGF
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain

phrase: LLDAYKSLNEAIIHAGIQTRTTVNISYIDSSDLMEQGVELLHDHDAILIPGGFGERGFEGKIKATKFARENNIPFLGICLGLQAAVVDYARHVANLKDANSTEFEKNCENPVIALISEWTTAAGTTEVRDENSDLGGTMRLGGQKCVLDPDSITFQCYQQKEIIERHRHRYEFNNDYLDTLNAAGLKLVGKSADGMLVEVIEIPDHPWFIGCQFHPEFTSTPRGGHPLFTGFI
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: RYIFITGGVVSSLGKGITSASLSAILEARGLKVTLLKLDPYINVDPGTMSPFQHGEVFVTNDGAETDLDLGHYERFSRAVMSQKNNFTTGRVYESVLKRERRGDYLGATIQVIPHITDEIKRRVVEGAGDADVALVEIGGTVGDIESQPFLEAVRQLRVELGSDRALFLHLTLVPFISTAGETKTKPTQHSVKELRSIGIQPDVLVCRSEHEIDESSRRKIALFTNVDIPAVISLPDTDSIYRIPSILGTAGLDEII
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: RYIFITGGVVSSLGKGITSASLSAILEARGLKVTLLKLDPYINVDPGTMSPFQHGEVFVTNDGAETDLDLGHYERFSRAVMSQKNNFTTGRVYESVLKRERRGDYLGATIQVIPHITDEIKRRVVEGAGDADVALVEIGGTVGDIESQPFLEAVRQLRVELGSDRALFLHLTLVPFISTAGETKTKPTQHSVKELRSIGIQPDVLVCRSEHEIDESSRRKIALFTNVDIPAVISLPDTDSIYRIPSILGTAGLDEIIVNKLH
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal
Protein sequence:
MLLQDLLYKTSVNAVNGSTAIPINALQIDSRAIQKGNCFIAIKGTGADGHSFINAAIKNGALAIVCEEMPDKPVNNVTYIQVNDSAEAAGIMAHLFFEEPTLKMKLVAVTGTNGKTTVATLLYKLFSATGFHCGLISTVENRIGNNIIPATHTTPDAIQLNSLLKRMQEAGCTYVFMECSSHAIQQKRIAGLEFTGALFTNITHDHLDYHKTFEAYINVKKSWFNNLPATAFAISNADDKRGAVMLQNTRAKKYFYSLKTLADYKGKILSNSLSGLHMMVNDTEVFFKMIGEFNAYNLLAVYGTAICLGMDKQEALQVLSQLDGAEGRFEYLVSSNEKVVGIVDYAHTPDALLNVLATINNLRHGNEKIITVVGCGGNRDKTKRPVMAEVACEHSDKVIFTSDNPRKENPGQIIKEMEAGVHAGLKKKFISIVDRREAIKTAVSLSEKEDIVLIAGKGHEKYQDIDGIKHDFDDKQVLLEMFTMLEK

Annotated regions:
phrase: INALQIDSRAIQKGNCFIAIKGTGADGHSFINAAIKNGALAIVCEEMPDKPVNNVTYIQVNDSAEAAGIMAH
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: GRFEYLVSSNEKVVGIVDYAHTPDALLNVLATINNLRHGNEKIITVVGCGGNRDKTKRPVMAEVACEHSDKVIFTSDNPRKENPGQIIKEMEAGVHAGLKKKFISIVDRREAIKTAVSLSEKEDIVLIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: VTGTNGKTTVATLLYKLFSATGFHCGLISTVENRIGNNIIPATHTTPDAIQLNSLLKRMQEAGCTYVFMECSSHAIQQKRIAGLEFTGALFTNITHDHLDYHKTFEAYINVKKSWFNNLPATAFAISNADDKRGAVMLQNTRAKKYFYSLKTLADYKGKILSNSLSGLHMMVNDTEVFFKMIGEFNAYNLLAVYG
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central
Protein sequence:
MNFKRVRSGAIYVLLLVALGAFLYTSLSNNATSAAQNIRIDQVAQHVREGRAKQIVVKDDRVTVTVRGEGNAPERVEQSRKESGTGLVQTLLNLGVTREQIQTVDIRVSEPQFWENWSGILLALLPLLLLGAFFFFIMRQAQGAGNQAFSFGKSRARMFTGDRPTVTFGDVAGNDEAKQELHEVVEFLKEPEKFAALGARIPRGVLLVGPPGTGKTLMAKAVSGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQAKKNAPCIIFVDEIDAVGRHRGAGLGGSHDEREQTLNQILVEMDGFDTDTNIIIIAATNRPDILDPALLRPGRFDRRVTMDTPDVKGRRAILEVHVRGKPLSADVDLEVIAKQTPGFAGADIENLVNEAAILAARRNRRSIGNDELQEAIERVIAGPERRSRLITPKEKEIVAYHEAGHAVAMHFLPNHDPVHKVTIVPRGMAGGYTMSLPDEETMVMTREKFCDQLVALLGGRVAEEIRFGDITTGASNDLERVTQLARSMVTQWGMSDRLGPIRYGVREEMVFLGRQYSEHRNYSDRVAQEIDAEVHEIVEDAHERCRQLLTQHWDKMVLLANRLLQVETINSAEFVALMRGEQPVEPVEKTPSPKLPVREPKADEHGRADKRGDSGVDLGGTVPAPA

Annotated regions:
phrase: VLLVGPPGTGKTLMAKAVSGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQAKKNAPCIIFVDEIDAVGRHRGAGLGGSHDEREQTLNQILVEMDGFDTDTNIIIIAATNRPDILDPALLRPGRFDRRVT
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: IPRGVLLVGPPGTGKTLMAKAVSGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQAKKNAPCIIFVDEIDAVGRHRGAGLGGSHDEREQTLNQILVEMDGFDTDTNIIIIAATNRPDILDPALLRPGRFDRRVTMDTP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: IIIIAATNRPDILDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: LITPKEKEIVAYHEAGHAVAMHFLPNHDPVHKVTIVPRGMAGGYTMSLPDEETMVMTREKFCDQLVALLGGRVAEEIRFGDITTGASNDLERVTQLARSMVTQWGMSDRLGPIRYGVREEMVFLGRQYSEHRNYSDRVAQEIDAEVHEIVEDAHERCRQLLTQHWDKMVLLANRLLQVETINSAEFV
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: DVDLEVIAKQTPGFAGADIENLVNEAAILAARRNRRSIGNDEL
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain
Protein sequence:
MGGKWSKRSVPGWPAIRERMRRTPAAERRVEPAAEGVGAVSRDLEKHGAITSSNIGNAACTWLEAQEQEEEEVGFPVRPQVPLRPMTYKAALDFSHFLKEKGGLEGLVWSQKRQDILDLWVYHSQGYFPDWQNYTPGPGPRFPLTFGWCFKLVPVEKEKVEEENKGENNCLLHPMSLHGMEDSEGEVLVWKFDSRLAFHHMARELHPEFYKDC

Annotated regions:
Protein sequence:
MRSLWVEKRKDDPVKTQMYYAKQGIITQEMEYVAKIEKLSPELIRSEIARGRLIIPANVNHTTLEPMAIGIAATCKINANIGSSAIASDVQGEVEKMQVSQHYKADTAMDLSTGGDLDEIRKAVIASSKIPIGTVPIYQILHDVGNKIEDLSIEVMLEVLERQAKQGVSYFTIHAGFLLETMPKIAKRKMGIVSRGGSLMAAWMMHYHRENPFYTAYDEILDICARYDVALSLGDSLRPGCLADASDDAQLGELKVLGELTLRAWEKNVQVMIEGPGHVPLNQIERNMKLQRELCHEAPFYILGPLVTDIAAGYDHISSAIGAAVGGWHGASMLCYVTPKEHLGLPNANDVREGIIAYKIAAHAADIARGRKGARDIDDEMSDARYRFDWNRQFELALDSERAREYHDETLPQDVFKEAEFCSMCGPKFCSYKITQSIMDNPEAIEQIAREVKEREALGA

Annotated regions:
Protein sequence:
MSRKPTLAVVGATGAVGTVMLQILSQHADIWGEIRLVASPRSAGRKLAVRGEQVEVHALSEDVFDGVDVAMFDVPDEVAAQWAPVAASKGVVVVDNSAAFRMDPDVPLVVPEVNPHAARVRPRGIVANPNCTTLSMIVAIGALHAEFGLRELIVSSYQAVSGAGRDGVDTLRRQIQLVAGSELGTSPGDVRRAVGDDTGPFPEPVALNVVPWAGSLKDDGWSSEEMKVRDESRKILGLPGLRVAATCVRVPVITTHSLTVHARFEDEVTVDRAREILATAPGVVLFDNPAAGEFPTPADVVGTDPTWVGRVRRSLDDPTALELFVCGDNLRKGAALNTAQIAELVAKEFTA

Annotated regions:
phrase: ALHAEFGLRELIVSSYQAVSGAGRDGVDTLRRQIQLVAGSELGTSPGDVRRAVGDDTGPFPEPVALNVVPWAGSLKDDGWSSEEMKVRDESRKILGLPGLRVAATCVRVPVITTHSLTVHARFEDEVTVDRAREILATAPGVVLFDNPAAGEFPTPADVVGTDPTWVGRVRRSLDDPTALELFVCGDNLR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: TLAVVGATGAVGTVMLQILSQHADIWGEIRLVASPRSAGRKLAVRGEQVEVHALSEDVFDGVDVAMFDVPDEVAAQWAPVAASKGVVVVDNSAAFRMDPDVPLVVPEVNPHAARV
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: LAVVGATGAVGTVMLQILSQHADIWGEIRLVASPRSAGRKLAVRGEQVEVHALSEDVFDGVDVAMFDVPDEVAAQWAPVAASKGVVVVDNSAAFRMDPDVPLVVPEVNPHA
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MKLNQLTVDCRPSRVVGEGDREVKSVQIDSRRVKPGDLFVALRGTQVDGHEYIGKAVAQGATAVACEVLPQDTCDGVTYLVYPDTELAVGPLATACAGNPSRRMKLVGVTGTNGKTTIATVLYNMFRRMGYKCGLCSTVCNYIDGRAIPTECTTPDAVTLNQLLGQMADEGCEYAFMEVSSHSVAQHRIGGLTFAGGIFTNLTRDHLDYHKTFENYRNAKKAFFDALPAGAFAITNADDRNGMVMVQNTRARVKTYSVRGAADFRGRVLEESFEGMNLEIDGHEVSVQFVGRFNVSNLLAVYAATVMLGVEPGEALVQMSAMKPVNGRFECIRSPRGVTAIVDYAHTPDALVNVLQTINEVLRHKGECWTVCGAGGNRDRGKRPIMAQEAVRNSDHVIITSDNPRYEDPQAIIDDMLAGLDAEQRQGVLSIVDRREAIRTACMLAKPGDVVLVAGKGHEDYQIVQGVKHHFDDHEVIREAFGL

Annotated regions:
phrase: VTGTNGKTTIATVLYNMFRRMGYKCGLCSTVCNYIDGRAIPTECTTPDAVTLNQLLGQMADEGCEYAFMEVSSHSVAQHRIGGLTFAGGIFTNLTRDHLDYHKTFENYRNAKKAFFDALPAGAFAITNADDRNGMVMVQNTRARVKTYSVRGAADFRGRVLEESFEGMNLEIDGHEVSVQFVGRFNVSNLLAVYA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: VKSVQIDSRRVKPGDLFVALRGTQVDGHEYIGKAVAQGATAVAC
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: GRFECIRSPRGVTAIVDYAHTPDALVNVLQTINEVLRHKGECWTVCGAGGNRDRGKRPIMAQEAVRNSDHVIITSDNPRYEDPQAIIDDMLAGLDAEQRQGVLSIVDRREAIRTACMLAKPGDVVLVAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MKEHIFLTGFMASGKSRTGRTLSERLGRPLVDTDAVIVERAGKSISEIFEQDGEAKFREMERDVIAEIAANETPQVVSLGGGAINNPENVKVIRESGTLIRLWAKPEILSERIGRKNTRPLLANLSDEERLAKIKVMLKEREKNYAQADFSVESTNDVNDSHIIERILRMLQFWKSHALDVYPSSGGRYPIFIGKDIVPETACLLEGLQLAPSHEFLVCTDTTIAKAQGNMLNMLRGQAGRCPVFKFQAGERNKTLHNLNQLFTFMLHRGYTRKSCLLQFSGGVVGDMAGFGAATYQRGIPFIQFPTTLLSMVDSSVGGKVAVNHPEGKNMIGAFYQPRAVVCDISVLSTLNDTEYLAGLAEIVKYGVIYDEEFFRYLEGNVSAIKNRDFDALKHMIFRSCQIKAEVVGIDEKESGLRAILNYGHTFGHAIEKLTGYNMFSHGIAVSLGMRVAARAAVMLGMMDAAAESRQNALLDALGFPKTFNVDTEKAWEAMAVDKKAEKGTRVYILPTRIGAVEKVTNIEKEIVTKAWDAIR

Annotated regions:
phrase: GLAEIVKYGVIYDEEFFRYLEGNVSAIKNRDFDALKHMIFRSCQIKAEVVGIDEKESGLRAILNYGHTFGHAIEKLTGYNMFSHGIAVSLGMRVAARAAVMLGMMDAAAESRQNALLDALGFPKTFNVDTEKAWEAMAVDKK
type: DOMAIN
name: DHQS_C
description: 3-dehydroquinate synthase, C-terminal domain

phrase: REMERDVIAEIAANETPQVVSLGGGA
type: CONSERVED_SITE
name: Shikimate_kinase_CS
description: Shikimate kinase, conserved site

phrase: KFQAGERNKTLHNLNQLFTFMLHRGYTRKSCLLQFSGGVVGDMAGFGAATYQRGIPFIQFPTTLLSMVDSSVGGKVAVNHPEGKNMIGAFYQPRAVVCDISVLSTLNDTE
type: DOMAIN
name: DHQS/DOIS_N
description: 3-dehydroquinate synthase, N-terminal domain
Protein sequence:
MTNVKTSSLGFPRIGLNREWKKSLEAYWKGNTDRETFLKEMDEQFLAALQTQLDQQIDIIPVSDFTMYDHVLDTAVMFNWIPDRFKDINDPLDTYFAMARGTKDAVSSEMTKWFNTNYHYIVPEYEKGAQYRVTRNKPLQDYQRAKAALGTETKPVILGLYTFVALAKGYEQQDIKDIYNQMTPLYIQVLKELEQEGVKWVQIDEPALVTASPEEAAAVKEIYQTITEEVSELNILLQTYFDSVDAYEELISFPVAGIGLDFVHDKGKNFEHLKAHGFPKDKVLAAGILDGRNIWKANLEERLDLTLELIQRAGVDEVWIQPSNSLLHVPVAKHPGEHLADDLLNGLSFAKEKLLELTLLKNGLVSGKAAIQAEIDEAHGHLQDLKQYGAATNSAFAEERGKLTEEDFKRPTAFEERLRIQNDSLGLPLLPTTTIGSFPQTADVRSARQKWRKKEWSDEQYEAFIQEETKKWIDIQEDLGLDVLVHGEFERTDMVEYFGEKLGGFAFTKYAWVQSYGSRCVRPPVIYGDVEFKEPMTVKETVYAQSLTSKKVKGMLTGPVTILNWSFARYDLPRKEIAFQIACALRKEVEALEKAGIQIIQVDEPALREGLPLKERDWDEYLKWAAEAFRLSTSSVEDTTQIHTHMCYSNFEDIVDAIEDLDADVITIEHSRSHGGFLDYLEQHPYLKGLGLGVYDIHSPRVPSSDEMLTIIEDALKVCPADRFWVNPDCGLKTRQPEETIAALKNMVEAAKQARGKLAQTV

Annotated regions:
phrase: LPTTTIGSFPQTADVRSARQKWRKKEWSDEQYEAFIQEETKKWIDIQEDLGLDVLVHGEFERTDMVEYFGEKLGGFAFTKYAWVQSYGSRCVRPPVIYGDVEFKEPMTVKETVYAQSLTSKKVKGMLTGPVTILNWSFARYDLPRKEIAFQIACALRKEVEALEKAGIQIIQVDEPALREGLPLKERDWDEYLKWAAEAFRLSTSSVEDTTQIHTHMCYSNFEDIVDAIEDLDADVITIEHSRSHGGFLDYLEQHPYLKGLGLGVYDIHSPRVPSSDEMLTIIEDALKVCPADRFWVNPDCGLKTRQPEETIAALKNMVEAA
type: DOMAIN
name: Met_Synth_C/arc
description: Cobalamin-independent methionine synthase MetE, C-terminal/archaeal

phrase: TSSLGFPRIGLNREWKKSLEAYWKGNTDRETFLKEMDEQFLAALQTQLDQQIDIIPVSDFTMYDHVLDTAVMFNWIPDRFKDINDPLDTYFAMARGTKDAVSSEMTKWFNTNYHYIVPEYEKGAQYRVTRNKPLQDYQRAKAALGTETKPVILGLYTFVALAKGYEQQDIKDIYNQMTPLYIQVLKELEQEGVKWVQIDEPALVTASPEEAAAVKEIYQTITEEVSELNILLQTYFDSVDAYEELISFPVAGIGLDFVHDKGKNFEHLKAHGFPKDKVLAAGILDGRNIWKANLEERLDLTLELI
type: DOMAIN
name: Cbl-indep_Met_Synth_N
description: Cobalamin-independent methionine synthase MetE, N-terminal

phrase: PTTTIGSFPQTADVRSARQKWRKKEWSDEQYEAFIQEETKKWIDIQEDLGLDVLVHGEFERTDMVEYFGEKLGGFAFTKYAWVQSYGSRCVRPPVIYGDVEFKEPMTVKETVYAQSLTSKKVKGMLTGPVTILNWSFARYDLPRKEIAFQIACALRKEVEALEKAGIQIIQVDEPALREGLPLKERDWDEYLKWAAEAFRLSTSSVEDTTQIHTHMCYSNFEDIVDAIEDLDADVITIEHSRSHGGFLDYLEQHPYLKGLGLGVYDIHSPRVPSSDEMLTIIEDALKVCPADRFWVNPDCGLKTRQPEETIAALKNMVEAA
type: DOMAIN
name: Met_Synth_C/arc
description: Cobalamin-independent methionine synthase MetE, C-terminal/archaeal
Protein sequence:
MSSALDLMTLDSAGIVELIEKLSWPHYRAEQLLHWIYQRRLTDITAMTDLSKADRARLAECACISSLMPDSIRNTEDGTQKFVFALEDRKSIETVVIPDAERLTVCLSTQVGCTLDCAFCLTGRMGLLRNLKAHEIVGQVLAVQRELSRLRHRRLTNVVLMGMGEPLANIEAVEEAIRRLTDTTWGIGFSPRRITLSTAGLATRLARVANLGVNLAVSLNATTDAQRSRLMPAVNRAYPLDMLMKACRTFPLKPRRRLTFEYVLLEGENDTERDAVRLAMLTKGIRCKINLIPFNEFPGSGFRRPSDHVVLRFQAVLDRHDIAAYIRKSKGREILGACGQLGTLPGSLPLQLERPATRAGFLNPVSS

Annotated regions:
phrase: DAERLTVCLSTQVGCTLDCAFCLTGRMGLLRNLKAHEIVGQVLAVQRELSRLRHRRLTNVVLMGMGEPLANIEAVEEAIRRLTDTTWGIGFSPRRITLSTAGLATRLARVANLGVNLAVSLNATTDAQRSRLMPAVNRAYPLDMLMKACRTFPLKPRRRLTFEYVLLEGENDTERDAVRLAMLTKGIRCKINLIPFNEFPGSGFRRPSDHVVLRFQAVLDRHDIAAYIRKSKGR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: DLMTLDSAGIVELIEKLSWPHYRAEQLLHWIYQRRLTDITAMTDLSKADRARLAECAC
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: STQVGCTLDCAFCLTGRMGLLRNLKAHEIVGQVLAVQRELSRLRHRRLTNVVLMGMGEPLANIEAVEEAIRRLTDTTWGIGFSPRRITLSTAGLATRLARVANLGVNLAVSLNATTDAQRSRLMPAVNRAYPLDMLMKACRTFPLKPRRRLTFEYVLLEGENDTERDAV
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MTPTSLVRADPKSSHRWVPAAAGWIVGVIATLSLLASVSPLVRSIIRVPREFVDDYIFNFPDTSFAWAFVLVLLAAALAARKRIAWWILTGYMVAAVFWNVAGLIGDDGRWGAEAGELVGLAFHLAAIVFLLLARKEFWARVRRGALLKAAATLVAGMAVGTLVGWGLLELFPGTLARSDRFLYALNRVSAFAGADASNFSGHPHVFVNALLGLFGAMALMVAAVVLFQSQRADNALTGEDESAIRGLLDVYGKNDSLGYFATRRDKSVVFAPNGRAAITYRVEVGVCLASGDPVGDPKAWPQAIGAWLKLCETYGWAPGVMGASAGGAEAFRDAGLHALQLGDEAILHPENFRLSGPDMRAVRQAVTRARRSGVTVRFRRHRELSAEEMAEVIANADAWRDTEDERGFSMALGRLGDPADGDCLLVEAVQDERVVAMLSLVPWGSTGVSLDLMRRSPQSPNGTIELMVSELCLRAEDIGVTRISLNFAMFRSAFEQGAQLGAGPVARLWRWLLVFFSRWWQLETLYRSNMKYQPEWVPRYACFEDARLVPRVGVASVIAEGFLVLPFSRRHEQPHTGHHIAAPGSLVETGLLHSDGTAPDGMGIQDDDIRDGPAPRLPEQVRVRMAKLKALQAEGVDAYPVGSPPSHTVAQALDAGEGTEVTVAGRVLRMRDYGGVLFAQLRDWSGETQLALDNSTLTDATTADFTRSIDLGDLIEVTGTMGRTRSGKWSVLVTRWRLIGKCLRPLPDKWKGLTDQEARVRARYVDL

Annotated regions:
phrase: HRWVPAAAGWIVGVIATLSLLASVSPLVRSIIRVPREFVDDYIFNFPDTSFAWAFVLVLLAAALAARKRIAWWILTGYMVAAVFWNVAGLIGDDGRWGAEAGELVGLAFHLAAIVFLLLARKEFWARVRRGALLKAAATLVAGMAVGTLVGWGLLELFPGTLARSDRFLYALNRVSAFAGADASNFSGHPHVFVNALLGLFGAMALMVAAVVL
type: DOMAIN
name: tRNA-synt_2_TM
description: Lysyl-tRNA synthetase, N-terminal transmembrane region

phrase: VTVAGRVLRMRDYGGVLFAQLRDWSGETQLALDNSTLTDATTADFTRSIDLGDLIEVTGTMGRTRSGKWSVLVTRWRL
type: DOMAIN
name: NA-bd_OB_tRNA
description: OB-fold nucleic acid binding domain, AA-tRNA synthetase-type

phrase: EVTVAGRVLRMRDYGGVLFAQLRDWSGETQLALDNSTLTDATTADFTRSIDLGDLIEVTGTMGRTRSGKWSVLVTRWRLIGKCLRPLPDKWKGLTDQEARVRARYVD
type: DOMAIN
name: Lys-tRNA-ligase_II_N
description: Lysine-tRNA ligase, class II, N-terminal

phrase: GLLDVYGKNDSLGYFATRRDKSVVFAPNGRAAITYRVEVGVCLASGDPVGDPKAWPQAIGAWLKLCETYGWAPGVMGASAGGAEAFRDAGLHALQLGDEAILHPENFRLSGPDMRAVRQAVTRARRSGVTVRFRRHRELSAEEMAEVIANADAWRDTEDERGFSMALGRLGDPADGDCLLVEAVQDERVVAMLSLVPWGSTGVSLDLMRRSPQSPNGTIELMVSELCLRAEDIGVTRISLNFAMFRSAFEQGAQLGAGPVARLWRWLLVFFSRWWQLETLYRSNMKYQPEWVPRYAC
type: DOMAIN
name: LPG_synthase_C
description: Phosphatidylglycerol lysyltransferase, C-terminal
Protein sequence:
MPRALWTAWVWAXIILSTEGASDQASSLSCDSTGVCDGHSRSLNSIPSGLTAGVKSLDLSNNEITYVGNRDLQRCVNLKTLRLGANEIHTVEEDSFFHLRNLEYLDLSYNRLSNLSSSWFRSLYVLKFLNLLGNLYKTLGETSLFSHLPNLXTLKVGNSNSFTEIHEKDFTGLTFLEELEISAQNLQIYVPKSLKSIQNISHLILHLKQPVLLVDILVDIVSSLDCLELRDTNLHTFHFSEASISEMSTSVKKLIFRNVQFTDESFVEVVKLFNYVSGILEVEFDDCTHDGIGDFRALSLDRIRHLGNVETLTIRKLHIPQFFLFHDLSSIYPLTGKVKRVTIENSKVFLVPCLLSQHLKSLEYLDLSENLMSEETLKNSACKDAWPFLQTLVLRQNRLKSLEKTGELLLTLENLNSLDISKNNFLSMPETCQWPGKMKQLNLSSTRIHSLTQCLPQTLEILDVSNNNLDSFSLILPQLKELYISRNKLKTLPDASFLPVLSVMRISRNIINTFSKEQLDSFQQLKTLEAGGNNFICSCDFLSFTQGQQALGRVLVDWPDDYRCDSPSHVRGQRVQDARLSLSECHRAAVVSAACCALFLVLLLTGVLCHRFHGLWYMKMMWAWLQAKRKPRKAPRRDICYDAFVSYSERDSYWVENLMVQELEQFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHKTIFVLSENFVXSEWCKYELDFSHFRLFDENNDAAILILLEPIDKKAIPQRFCKLRKIMNTKTYLEWPVDE

Annotated regions:
phrase: LPNLXTLKVGNSNSFTEIHEKDFT
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LPQLKELYISRNKLKTLPDASFL
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: CVNLKTLRLGANEIHTVEEDSFF
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LRNLEYLDLSYNRLSNLSSSWFR
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LENLNSLDISKNNFLSMPETCQ
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LKSLEYLDLSENLMSEETLKNSACK
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: NLEYLDLSYNRLSNLSSSWFR
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: QLKELYISRNKLKTLPDASFL
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: NNFICSCDFLSFTQGQQALGRVLVDWPDDYRCDSPSHVRGQRVQDARLSLSEC
type: DOMAIN
name: Cys-rich_flank_reg_C
description: Cysteine-rich flanking region, C-terminal

phrase: CYDAFVSYSERDSYWVENLMVQELEQFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHKTIFVLSENFVXSEWCKYELDFSHFRLFDENNDAAILILLEPIDKKAIPQRFCKLRKIMNTKTYLEWPVD
type: DOMAIN
name: TIR_dom
description: Toll/interleukin-1 receptor homology (TIR) domain

phrase: ICYDAFVSYSERDSYWVENLMVQELEQFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHKTIFVLSENFVXSEWCKYELDFSHFRLFDENNDAAILILLEPIDKKAIPQRFCKLRKIMNTKTYLEWPVD
type: DOMAIN
name: TIR_dom
description: Toll/interleukin-1 receptor homology (TIR) domain

phrase: PQLKELYISRNKLKTLPDASFLPVLSVMRISRNIINTFSKEQLDSFQQLKTLEAGGNN
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: NLKTLRLGANEIHTVEEDSFFHLRNLEYLDLSYNRLSNLSSSWFRSLYVLKFLNLLG
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: YDAFVSYSERDSYWVENLMVQELEQFNPPFKLCLHKRDFIPGKWIIDNIIDSIEKSHKTIFVLSENFVXSEWCKYELDFSHFRLFDENNDAAILILLEPIDKKAIPQRFCKLRKIMNTKTYLEW
type: DOMAIN
name: TIR_dom
description: Toll/interleukin-1 receptor homology (TIR) domain
Protein sequence:
MVACRAIGILSRFSAFRILRSRGYICRNFTGSSALLTRTHINYGVKGDVAVVRINSPNSKVNTLSKELHSEFSEVMNEIWASDQIRSAVLISSKPGCFIAGADINMLAACKTLQEVTQLSQEAQRIVEKLEKSTKPIVAAINGSCLGGGLEVAISCQYRIATKDRKTVLGTPEVLLGALPGAGGTQRLPKMVGVPAALDMMLTGRSIRADRAKKMGLVDQLVEPLGPGLKPPEERTIEYLEEVAITFAKGLADKKISPKRDKGLVEKLTAYAMTIPFVRQQVYKKVEEKVRKQTKGLYPAPLKIIDVVKTGIEQGSDAGYLCESQKFGELVMTKESKALMGLYHGQVLCKKNKFGAPQKDVKHLAILGAGLMGAGIAQVSVDKGLKTILKDATLTALDRGQQQVFKGLNDKVKKKALTSFERDSIFSNLTGQLDYQGFEKADMVIEAVFEDLSLKHRVLKEVEAVIPDHCIFASNTSALPISEIAAVSKRPEKVIGMHYFSPVDKMQLLEIITTEKTSKDTSASAVAVGLKQGKVIIVVKDGPGFYTTRCLAPMMSEVIRILQEGVDPKKLDSLTTSFGFPVGAATLVDEVGVDVAKHVAEDLGKVFGERFGGGNPELLTQMVSKGFLGRKSGKGFYIYQEGVKRKDLNSDMDSILASLKLPPKSEVSSDEDIQFRLVTRFVNEAVMCLQEGILATPAEGDIGAVFGLGFPPCLGGPFRFVDLYGAQKIVDRLKKYEAAYGKQFTPCQLLADHANSPNKKFYQ

Annotated regions:
phrase: GFYTTRCLAPMMSEVIRILQEGVDPKKLDSLTTSFGFPVGAATLVDEVGVDVAKHVAEDLGKVFGERFGGGNPELLTQMVSKGFLGRKSGKGFYI
type: DOMAIN
name: 3HC_DH_C
description: 3-hydroxyacyl-CoA dehydrogenase, C-terminal

phrase: RLVTRFVNEAVMCLQEGILATPAEGDIGAVFGLGFPPCLGGPFRFVDLYGAQKIVDRLKKYEAAYGKQFTPCQLLADHA
type: DOMAIN
name: 3HC_DH_C
description: 3-hydroxyacyl-CoA dehydrogenase, C-terminal

phrase: DGPGFYTTRCLAPMMSEVIRILQE
type: CONSERVED_SITE
name: 3-OHacyl-CoA_DH_CS
description: 3-hydroxyacyl-CoA dehydrogenase, conserved site

phrase: LAILGAGLMGAGIAQVSVDKGLKTILKDATLTALDRGQQQVFKGLNDKVKKKALTSFERDSIFSNLTGQLDYQGFEKADMVIEAVFEDLSLKHRVLKEVEAVIPDHCIFASNTSALPISEIAAVSKRPEKVIGMHYFSPVDKMQLLEIITTEKTSKDTSASAVAVGLKQGKVIIVVK
type: DOMAIN
name: 3-OHacyl-CoA_DH_NAD-bd
description: 3-hydroxyacyl-CoA dehydrogenase, NAD binding

phrase: VAAINGSCLGGGLEVAISCQ
type: CONSERVED_SITE
name: Enoyl-CoA_hyd/isom_CS
description: Enoyl-CoA hydratase/isomerase, conserved site