nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTDVTVKQLSEVVGTPVERLIEQLGEAGVSVSDADQTVTEEQKLKLLEHLRKSHGKSSAAGEGKKITLRRKSTTELRVTGSQGRAKTVSVEVRKRRTYVKRDEAEVAAPVEEAAPAPVLESKAAQIAKQVEEERKAAMDASRRADEERKAAEAARKAEQERKAAEEAARLEAEEAARREAEEAARAAEPETVAEAVEAAVAPPPSDAARPARRRRGPKEREDEKGGRREELHVASDKRGRRKGKGKGATRVAAAAVASKHGFERPTAPVVREVALPETLTVGELAQKLAIKAPELIKSLMGMGVMATINQAIDRDTATLVVEELGHVAVPMQVEDLDEELAVATAEPVGELKPRPPVVTIMGHVDHGKTSLLDYIRSSRVASGEAGGITQHIGAYHVQTNRGGITFLDTPGHAAFTAMRARGAKVTDIVILVVSADDGVMPQTIEAVQHAKAAGVPMVVAVNKIDKPEADPDRVKNELSVHQVIPEEWGGDTQFIHVSALKGTGVEDLLEAVNLQAEVMELKAPVEGPAAGVVIESRLDKGRGPVATVLVQRGTLNKGDVILTGQEFGRVRAMFDENGKPVKSAGPSMPVEVLGLSGTPNAGDDVLVLEDERKAREVALFRQGKFRESKLATQQAAKLENLFSQMQEGQVGTVNILLKADVQGSAEAIRDALEKLSTDEVKVKIIAAGVGGITESDINLAKASEAIVIGFNVRADAGARKAVAEQEVDLRYYSVIYEAIDDVRQALTGLLSPEMREEIIGLAQVKDVFKSSQFGAVAGCLVVEGTIKRGNPIRVLRNNVVIYEGELESLRRFKDDVNEVRAGTDCGIAVKNYNDVKPGDQIEVYQRVEVARTL

Annotated regions:
phrase: PETLTVGELAQKLAIKAPELIKSLMGMGVMATINQAIDRDTATLVVEELG
type: DOMAIN
name: IF2_N
description: Translation initiation factor IF-2, N-terminal

phrase: MTDVTVKQLSEVVGTPVERLIEQLGEAGVSVSDADQTVTEEQKLKLLEHL
type: DOMAIN
name: IF2_N
description: Translation initiation factor IF-2, N-terminal

phrase: PAAGVVIESRLDKGRGPVATVLVQRGTLNKGDVILTGQEFGRVRAMFDENGKPVKSAGPSMPVEVLGLSGTPNAGDDVLVLEDERKAREVALFR
type: DOMAIN
name: IF2_II
description: Translation initiation factor IF-2, domain II

phrase: PAAGVVIESRLDKGRGPVATVLVQRGTLNKGDVILTGQEFGRVRAMFDENGKPVKSAGPSMPVEVLGLSGTPNAGDDVL
type: DOMAIN
name: EF-G-like_DII
description: Elongation factor G-like, domain II

phrase: VTIMGHVDHGKTSLLDYIRSSRVASGEAGGITQHIGAYHVQTNRGGITFLDTPGHAAFTAMRARGAKVTDIVILVVSADDGVMPQTIEAVQHAKAAGVPMVVAVNKIDKPEADPDRVKNELSVHQVIPEEWGGDTQFIHVSALKGTGVEDLLEAV
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: GAVAGCLVVEGTIKRGNPIRVLRNNVVIYEGELESLRRFKDDVNEVRAGTDCGIAVKNYNDVKPGDQ
type: DOMAIN
name: EFTu-like_2
description: Translation elongation factor EFTu-like, domain 2

phrase: SKLATQQAAKLENLFSQMQEGQVGTVNILLKADVQGSAEAIRDALEKLSTDEVKVKIIAAGVGGITESDINLAKASEAIVIGFNVRADAGARKAVAEQEVDLRYYSVIYEAIDD
type: DOMAIN
name: TIF_IF2_dom3
description: Translation initiation factor IF- 2, domain 3

phrase: KKITLRRKSTTELRVTGSQGRAKTVSVEVRKRRTYVK
type: DOMAIN
name: IF2_assoc_dom_bac
description: Initiation factor 2 associated domain, bacterial

phrase: PRPPVVTIMGHVDHGKTSLLDYIRSSRVASGEAGGITQHIGAYHVQTNRGGITFLDTPGHAAFTAMRARGAKVTDIVILVVSADDGVMPQTIEAVQHAKAAGVPMVVAVNKIDKPEADPDRVKNELSVHQVIPEEWGGDTQFIHVSALKGTGVEDLLEAVNLQAEVMEL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: PVVTIMGHVDHGKTSLLDYIRSSRVASGEAGGITQHIGAYHVQTNRGGITFLDTPGHAAFTAMRARGAKVTDIVILVVSADDGVMPQTIEAVQHAKAAGVPMVVAVNKIDKPEADPDRVKNELSVHQVIPEEWGGDTQFIHVSALKGTGVEDLLEA
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain
Protein sequence:
MAIIIAAPASGTGKTTITLALLAYLKAHALRVRSFKVGPDYIDPMFHAAVTGQGCVNLDLFLTDEPFVRATYHHHCRGQQAAVIEGVMGLFDGRAGQGDFASTAHVARLLRLPVILVIDGSGAGFSVAATLYGFRRFDPRVRIAGVILNRVGSERHAQILSEAVRSQGLELLGTVYKDETIALPHRHLGLVPVEELSDFRRTQQQLAALAERSFDWQKLLPLVAIQPTAPAPARWEAEPLPPVRIAVARDRAFSFYYQDNLELLAALGAQLETFSPLAGEWPDCRGYLLGGGFPELCAGELSAKTRFWEGLRGAVARGVPLYAECGGLMVLGEALRTPEGRSHPMAGILEASCWMGKRTVLGYRVATALHSSCAVEAGRQLRGHLFHRSRMEPQPGAPLWQLDDDEQEGWVRGNLHASYLHLHWGTQAWAARRFVRRCLAVAFEGKSTPARF

Annotated regions:
phrase: IIIAAPASGTGKTTITLALLAYLKAHALRVRSFKVGPDYIDPMFHAAVTGQGCVNLDLFLTDEPFVRATYHHHCRGQQAAVIEGVMGLFDGRAGQGDFASTAHVARLLRLPVILVIDGSGAGFSVAATLYGFRRFDPRVRIAGVILNRVGSERHAQILSEAVRSQGLELLGTVYKDETIALPHR
type: DOMAIN
name: CobQ/CobB/MinD/ParA_Nub-bd_dom
description: CobQ/CobB/MinD/ParA nucleotide binding domain

phrase: RIAVARDRAFSFYYQDNLELLAALGAQLETFSPLAGEWPDCRGYLLGGGFPELCAGELSAKTRFWEGLRGAVARGVPLYAECGGLMVLGEALRTPEGRSHPMAGILEASCWMGKRTVLGYRVATALHSSCAVEAGRQLRGHLFHRSRMEPQPGAPLWQLDDDEQEGWVRGNLHASYLHLHWGTQ
type: DOMAIN
name: GATase_3
description: CobB/CobQ-like glutamine amidotransferase
Protein sequence:
MFGVLNSNDHRAAVQQRNIPAFGRTSFEPWTDNPTSNYRCETGGNGRDSGQNRVRRPMNAFMVWSRDQRRKVALENPQMQNSEISKQLGYQWKMLTEAEKWPFFEEAQRLQAMHREKYPDYKYRPRRKALPQKSDKLLPAASSSMLCRQVLVDEKWYPFTYRDSCSRAAHSRMEDQLSSSQPVNIANSLLQQEHHYRSTSLGDSPETLAAHLSADPPFYPKEQLGLSDAYFP

Annotated regions:
phrase: RRPMNAFMVWSRDQRRKVALENPQMQNSEISKQLGYQWKMLTEAEKWPFFEEAQRLQAMHREKYPDY
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain

phrase: VRRPMNAFMVWSRDQRRKVALENPQMQNSEISKQLGYQWKMLTEAEKWPFFEEAQRLQAMHREKYPDY
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain

phrase: RVRRPMNAFMVWSRDQRRKVALENPQMQNSEISKQLGYQWKMLTEAEKWPFFEEAQRLQAMHREKYPDYK
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain
Protein sequence:
MSPLLFGAGLVVLNLVTSARSQKTEPLSGSGDQPLFRGADRYDFAIMIPPGGTECFWQFAHQTGYFYFSYEVQRTVGMSHDRHVAATAHNPQGFLIDTSQGVRGQINFSTQETGFYQLCLSNQHNHFGSVQVYLNFGVFYEGPETDHKQKERKQLNDTLDAIEDGTQKVQNNIFHMWRYYNFARMRKMADFFLIQSNYNYVNWWSTAQSLVIILSGILQLYFLKRLFNVPTTTDTKKPRC

Annotated regions:
phrase: TECFWQFAHQTGYFYFSYEVQRTVGMSHDRHVAATAHNPQGFLIDTSQGVRGQINFSTQETGFYQLCLSNQHNHFGSVQVYLNFG
type: DOMAIN
name: GOLD_dom
description: GOLD domain

phrase: FAIMIPPGGTECFWQFAHQTGYFYFSYEVQRTVGMSHDRHVAATAHNPQGFLIDTSQGVRGQINFSTQETGFYQLCLSNQHNHFGSVQVYLNFGVFYEGPETDHKQKERKQLNDTLDAIEDGTQKVQNNIFHMWRYYNFARMRKMADFFLIQSNYNYVNWWSTAQSLVIILSGILQLYFLKRLF
type: DOMAIN
name: GOLD_dom
description: GOLD domain

phrase: DFAIMIPPGGTECFWQFAHQTGYFYFSYEVQRTVGMSHDRHVAATAHNPQGFLIDTSQGVRGQINFSTQETGFYQLCLSNQHNHFGSVQVYLNFGVFYEGPETDHKQKERKQLNDTLDAIEDGTQKVQNNIFHMWRYYNFARMRKMADFFLIQSNYNYVNWWSTAQSLVIILSGILQLYFLKRLF
type: DOMAIN
name: GOLD_dom
description: GOLD domain
Protein sequence:
MADDNQNEVKDEVVADIAPFDPTKKKKKKEVVIQDTTDDSVGKLAEKAEACTASEGQESTFAGLKKKKKKPIETSILNEESGDAVEDLNERTGEDEEGEGIVLETPSYPWEGSDRDYTYEELLDRVFTILRENNPDLAGDRRRTVMRPPQVLREGTKKAVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCQSPDTILSKENRLFFLRCEKCGSGRSVAPNKAGFMARVGRRNAGT

Annotated regions:
phrase: DRRRTVMRPPQVLREGTKKAVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCQSPDTILSKENRLFFLRCEKCG
type: DOMAIN
name: Transl_init_fac_IF2/IF5_dom
description: Translation initiation factor IF2/IF5 domain

phrase: RRRTVMRPPQVLREGTKKAVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICLGCQSPDTILSKENRLFFLRCEKCGS
type: DOMAIN
name: Transl_init_fac_IF2/IF5_dom
description: Translation initiation factor IF2/IF5 domain
Protein sequence:
MARLSGVDLPREKRVEIALTYIFGIGRTRSRETLAATGVNPDTRVRDLSEDEIVRLREWIDANYRVEGDLNREIKQDIRRKMEIGCYQGLRHRRNLPVHGQRTHTNARTRKGPRRAIAGKKKAGKK

Annotated regions:
phrase: QGLRHRRNLPVHG
type: CONSERVED_SITE
name: Ribosomal_uS13_CS
description: Small ribosomal subunit protein uS13, conserved site
Protein sequence:
MSQNIVIVGASGRMGRVLIEAVLDAPGARLHAAIDRADSGFVGQDAGLFCGRSSGVFISSDFIAALDGADVVIDFTRPEGTLEHMLACVERGVRMVIGTTGFDDEGKAAIRAAAGKIGIVFASNFSVGVNLTFKLLDMAARVLNEGYDVEIIEAHHRFKVDAPSGTALRMGEVIADALGRDLKQCAVYGREGVTGERDPQAIGFATVRGGDVVGDHTALFAALGERVEISHKASSRATFANGAVRAARWLSDKRNGLFDMQDVLGLR

Annotated regions:
phrase: NIVIVGASGRMGRVLIEAVLDAPGARLHAAIDRADSGFVGQDAGLFCGRSSGVFISSDFIAALDGADVVIDFTRPEGTLEHMLACVERGVRMVIGTTGFDDEGKAAIRAAAGKIGIVFASN
type: DOMAIN
name: DapB_N
description: Dihydrodipicolinate reductase, N-terminal

phrase: GVNLTFKLLDMAARVLNEGYDVEIIEAHHRFKVDAPSGTALRMGEVIADALGRDLKQCAVYGREGVTGERDPQAIGFATVRGGDVVGDHTALFAALGERVEISHKASSRATFANGAVRAARWLSDKRNGLFDMQDV
type: DOMAIN
name: DapB_C
description: Dihydrodipicolinate reductase, C-terminal

phrase: EIIEAHHRFKVDAPSGT
type: CONSERVED_SITE
name: DapB_N_CS
description: Dihydrodipicolinate reductase, conserved site
Protein sequence:
MSAEQPAETASAGNPLADRITTADGSKPEGTTETTDNEQADGAAAQLGGSELNEPDYTVEVKLSDLQADPNNPLYSVKSFEDLGLDPRILQGLSAMNFRKPSKIQERALPLLLNNPPKNLVGQSQSGTGKTAAFVLNALSRLDLSTEQAQKTPQALILAPTRELARQIVGVIQCMGQFLDGLNVSTAVPADTNSRHSKIESSVVVGTPGTVMDMIRKRVMVANKLKVLVLDEADNMLDQQGLGDQCIRVKALLPKDIQVVLFSATFPTHVHQYASKFAPQANELTLQHEELTVEGIKQLYLDCSDEEDKYKTLVQLYGLLTVASSIIFVKTRASAAEIEKRMVAEGHTVASLTGGIEGSQRDAVIDQFRAGQAKVLITTNVLARGIDVSTVSMVINYDIPELHQPGAPERQADFQTYLHRIGRTGRFGRVGVSISFVSNREEWNMLNQIQQYFNCTIQRVDTKDWDEVEDIIKKTIKNTRAQAQFGR

Annotated regions:
phrase: KIQERALPLLLNNPPKNLVGQSQSGTGKTAAFVLNALSRLDLSTEQAQKTPQALILAPTRELARQIVGVIQCMGQFLDGLNVSTAVPADTNSRHSKIESSVVVGTPGTVMDMIRKRVMVANKLKVLVLDEADNMLDQQGLGDQCIRVKALLPKDIQVVLFSATFPTH
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: VLDEADNM
type: CONSERVED_SITE
name: RNA-helicase_DEAD-box_CS
description: ATP-dependent RNA helicase DEAD-box, conserved site

phrase: KSFEDLGLDPRILQGLSAMNFRKPSKIQ
type: DOMAIN
name: RNA_helicase_DEAD_Q_motif
description: RNA helicase, DEAD-box type, Q motif

phrase: GIKQLYLDCSDEEDKYKTLVQLYGLLTVASSIIFVKTRASAAEIEKRMVAEGHTVASLTGGIEGSQRDAVIDQFRAGQAKVLITTNVLARGIDVSTVSMVINYDIPELHQPGAPERQADFQTYLHRIGRTGRFGRVGVSISFVSNREEWNMLNQIQQYFNCTIQRVDTKDWDE
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: NFRKPSKIQERALPLLLNNPPKNLVGQSQSGTGKTAAFVLNALSRLDLSTEQAQKTPQALILAPTRELARQIVGVIQCMGQFLDGLNVSTAVPADTNSRHSKIESSVVVGTPGTVMDMIRKRVMVANKLKVLVLDEADNMLDQQGLGDQCIRVKALLPKDIQVVLFSATFPTHVHQYASKFAPQANELTLQHEELTVEGIKQ
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: LLLNNPPKNLVGQSQSGTGKTAAFVLNALSRLDLSTEQAQKTPQALILAPTRELARQIVGVIQCMGQFLDGLNVSTAVPADTNSRHSKIESSVVVGTPGTVMDMIRKRVMVANKLKVLVLDEADNMLDQQGLGDQCIRVKALLPKDIQVVLFSATFPTHVHQYASKFAPQANE
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: KYKTLVQLYGLLTVASSIIFVKTRASAAEIEKRMVAEGHTVASLTGGIEGSQRDAVIDQFRAGQAKVLITTNVLARGIDVSTVSMVINYDIPELHQPGAPERQADFQTYLHRIGRTGRF
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: AEIEKRMVAEGHTVASLTGGIEGSQRDAVIDQFRAGQAKVLITTNVLARGIDVSTVSMVINYDIPELHQPGAPERQADFQTYLHRIGRTGRF
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like
Protein sequence:
MAGRSVRVPRRGSAGTQSRGQLAAGRDLLAREQEYKRLNEELEAKTADLVRQAEEVIREQQEVRARPFSALTTSCKEEGGSSSRDLLSSEGTHPWTETKPKTKNTGPVNKIQNRLHSADKERKTNSSAKLKYPDAQTANDVAIPDDFSDFSLAKTISRIEGQLDEDGLPECAEDDSFCGVSKDIGTEAQIRFLKAKLHVMQEELDSVVCECSKKEDKIQDLKSKVKNLEEDCVRQQRTVTSQQSQIEKYKNLFEEANKKCDELQQQLSSVERELESKRRLQKQAASSQSATEVRLNRALEEAEKYKVELSKLRQTNKDITNEDHQKIEVLKSENKKLERQKGELMIGFKKQLKLIDILKRQKMHIEAAKMLSFSEEEFMKALEWGSS

Annotated regions:
Protein sequence:
MIRATSVTAKFDRAFDTITLDETARHRRRMMMRSDNGIEFLLDLPEARLLNHGDGLLLEDGRVIEVRALPEPLYEVRGRDSRHLLALAWQIGNRHLPAEIAEDRILIRRDHVIRDMLEGLGAMVTDITAPFSPEGGAYQAHSHDGHSHHQGHTHDHHD

Annotated regions:
phrase: RATSVTAKFDRAFDTITLDETARHRRRMMMRSDNGIEFLLDLPEARLLNHGDGLLLEDGRV
type: DOMAIN
name: UreE_N
description: UreE urease accessory, N-terminal

phrase: AFDTITLDETARHRRRMMMRSDNGIEFLLDLPEARLLNHGDGLLLEDGRV
type: DOMAIN
name: UreE_N
description: UreE urease accessory, N-terminal

phrase: EPLYEVRGRDSRHLLALAWQIGNRHLPAEIAEDRILIRRDHVIRDMLEGLGAMVTDITAPFSPEGGAYQAHSHDGHSHHQGHTHD
type: DOMAIN
name: UreE_C_dom
description: Urease accessory protein UreE, C-terminal domain
Protein sequence:
MSQALTLARPYARAAFAIACEKGKCMQWSQALTFSAQVANNPIAATLLSHPQLDHEQAAALLSPEGADPAYVRFLEVIAEAHRLDVLLQVAGLYEKLRAEAEHVIKAKITSAIELAPNELNNIVTALKKRFDCEIEVTTGVDHSLIGGAVIDTGNVVIDGSIKSKLTRLQASLTH

Annotated regions:
Protein sequence:
MSSHITLIKTNTNNENQMTQFNYKVDNDVMIIRAMVNNVAKQITPVWPLEKFIACNSLHGFESMSFEEAVIQNQTAKKGTPFNEKLERVNWHMIKWCGSFLDIGQGTLEMPHRDKGLYFGFLKLAPFDSELHQNNKSTKSWLSNLPEMPEQAIRLCLNKLGVLNQKQEKFLKSTLSHLPGWAGYIKWISEWKNRNGKEENPVSLADFLAVRLIITCVLWPEASQEEKKKKKDNAYTKQLIQNIKNKEDDYRQLLLNKLLPELDKVQIKENRANAQMVFCIDVRSEPFRRCIEKLGHYETLGFAGFFGLPVSIKDYDGETIKDSCPVLLKPRFNIHEKAIAANEHCIEHHEKGKEFKNILNRIYQQLKYNFSTPFALVESLGIWCGITMFLKSCSPIFARRLTKDLNEMICPSIQTQPVFELDLLEKEVGISLQEQIAYAEMALRLMGLTDNFAKLVIFCGHGSSTQNNPYASALDCGACGGNQGGKNAQLLASILNKIIVRRALAENGINIPQDTLFYGAQHDTTTDEVEIYHSNVSQFIHQDILDQLRTDLNIAKHNNNLERINYLNSIDCAEKDIARRSTDWSETRPEWGLARNAAFIVAPRQLTKNINLEGRCFLHSYDWSQDKDGALLETILTAPMVVAQWINTQYLFSTIDNVAYGSGSKITHNVAGKIGVMQGNASDLMHGLPLQSVMSHDDKSFHEPQRLLTLVYAPREIISELVEKHDVLKTLFFNEWVHLVAIDPRSHLFYKLEKTNTWSVIQ

Annotated regions:
Protein sequence:
MTFRTLDVDSITEPVLTEQDIFPIRNETAEQVQAAVSQLIPQARSAIQTGNALQGLKTLLSYVPYGNDVQEVRTQYLNAFVDVLSNIRAADIPAFVKECSTEEIDNIVNFIYRGLANPQAYNSSVLLNWHEKVVEISGIGCIVRVLNSRPDL

Annotated regions:
Protein sequence:
MGGGQQVKTLSQMGLTARGGREARITGLSVDSRDVKDGHLFAALPGTRVHGGEFIQYALRMGAGAILTDAAGARIAAEELAASDAALIVSEDPRQVLAYTAALWFGAQPEVVVAVTGTNGKTSVATFTRMIWTELGEEAVNLGTTGVEGVWSAPLAHTTPEPITLHRTLAAAAREGVSHAAMEASSHGLVQRRLDGVNLAAAGFTNLSQDHLDYHASFDDYFEAKAGLFARVLSEGGTAVVNIDDPRGPDMAAIAAGRGQRVIAVGRTEGADLHLTAQRFDTTGQEVFFSWERKGFRAYLPLIGGFQAENVLLAAGLVIGCGEEPERVFETLEHLTGVRGRMQLVARRANGAAVFVDYAHTPGAVATALCALRPHVAGRIVVIVGAGGDRDRGKRPLMGRAAADHADVVIVTDDNPRSEDPALIRAAVMEGCPDAQEVGDRAEAILRGVDQLEPGDVLLIAGKGHESGQVVGEDVLPFDDAEQASVAVAALEGRLA

Annotated regions:
phrase: GRMQLVARRANGAAVFVDYAHTPGAVATALCALRPHVAGRIVVIVGAGGDRDRGKRPLMGRAAADHADVVIVTDDNPRSEDPALIRAAVMEGCPDAQEVGDRAEAILRGVDQLEPGDVLLIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: ITGLSVDSRDVKDGHLFAALPGTRVHGGEFIQYALRMGAGAILTDAAGARIAAEELAASDAALIVSEDPRQVLAYTA
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: VTGTNGKTSVATFTRMIWTELGEEAVNLGTTGVEGVWSAPLAHTTPEPITLHRTLAAAAREGVSHAAMEASSHGLVQRRLDGVNLAAAGFTNLSQDHLDYHASFDDYFEAKAGLFARVLSEGGTAVVNIDDPRGPDMAAIAAGRGQRVIAVGRTEGADLHLTAQRFDTTGQEVFFSWERKGFRAYLPLIGGFQAENVLLAAG
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central
Protein sequence:
MLMPKRVKHRKVQRGRMKGKATRGNFIAYGDYGIQATECGWITSNQIESARIAINRYIRRGGKLWIKIFPDKPVTQKPAETRMGSGKGTPEYWVAVVKPGRVLFELTGVDEETAREAMRLAAHKLPVKTKFVKKSDFEEVGGEINEG

Annotated regions:
phrase: RMGSGKGTPEY
type: CONSERVED_SITE
name: Ribosomal_uL16_CS
description: Large ribosomal subunit protein uL16, conserved site

phrase: RGNFIAYGDYGIQATECGWITSNQIESARIAINRYIRRGGKLWIKIFPDKPVTQKPAETRMGSGKGTPEYWVAVVKPGRVLFELTGVDEETAREAMRLAAHKLPVKTKF
type: DOMAIN
name: Ribosomal_uL16_dom
description: Large ribosomal subunit protein uL16 domain

phrase: RRGGKLWIKIF
type: CONSERVED_SITE
name: Ribosomal_uL16_CS
description: Large ribosomal subunit protein uL16, conserved site
Protein sequence:
MSLVQIQLKTEDFKIYLQLPVRSQQHNFIYPLLFQEYIYVLVHDRDLKRSIFFANIGYEKKFRFQIVKRLINRMYKQIHLTTYYSNYSNKRTIYGLLKSFYYKLLSSGFSFLFEIPFFFKFISERKKILKSQNLRSIHSIFTFFEDNLSHLKYVLDLLIPNPPHPEILVQKIRYWVQDASSLHLLRFFLHEFCSVKSLITTNKSKRNERFLFLLYNSYICEYESIFLVLRNQSLHLGSMSFVTLFERNIFYGKIECFAELFAQDSQANLRLFKDTDPSMHYARYRGKSILASNGGLLLMPKWKYYIVNFWQCYFYLWFHTERINISQIDSHPFYLMDYISSIAQIPSMVRSKMLENLFLINNDMKIFETFVPIIPIIGSLAKAKFCNLLGNPISKPVWADFSDSDIIERFGRICRNIFHYYSGSSKKRSLYQIKYILRLSCARTLARKHKSTLRGFLQSLGLKLLEEFFTSEEQIIFLTFPNASLNLRGVSKGRIWYFDIVYINEQANF

Annotated regions:
phrase: ETFVPIIPIIGSLAKAKFCNLLGNPISKPVWADFSDSDIIERFGRICRNIFHYYSGSSKKRSLYQIKYILRLSCARTLARKHKSTLRGFLQSLGLKLLEEFFTSEEQIIFLTFP
type: DOMAIN
name: Domain_X
description: Domain X

phrase: EDFKIYLQLPVRSQQHNFIYPLLFQEYIYVLVHDRDLKRSIFFANIGYEKKFRFQIVKRLINRMYKQIHLTTYYSNYSNKRTIYGLLKSFYYKLLSSGFSFLFEIPFFFKFISERKKILKSQNLRSIHSIFTFFEDNLSHLKYVLDLLIPNPPHPEILVQKIRYWVQDASSLHLLRFFLHEFCSVKSLITTNKSKRNERFLFLLYNSYICEYESIFLVLRNQSLHLGSMSFVTLFERNIFYGKIECFAELFAQDSQANLRLFKDTDPSMHYARYRGKSILASNGGLLLMPKWKYYIVNFWQCYFYLWFHTERINISQIDSHPFYL
type: DOMAIN
name: Maturase_MatK_N
description: Maturase MatK, N-terminal domain
Protein sequence:
MDAFRLAPCGPLRGRLRVPGDKSVTHRGLMLLALAEGEGRLFYPLKAGDTLSTARVLQALGAEVREEGPHFLVRGRGLRFQEPEDVLDCGNAGTLMRLLLGLLAGQEGLFAVLTGDASLRRRPMGRVVAPLRAMGARVDGREEGERAPLAVRGAPLRGLRYTLPVPSAQVKSALLLAGLFAEGVTEVEEPTPTRDHTERLFRHFGLPLEVEGRKVRTWRTGPFPAKDLVVPGDFSSAAFFLVAALVTPGSEVVVEGVGLNPTRTGLLTVLKAMGADLEWQVLEGEAGEPVGWVRARHSLLKGVAVDPGLIPLMVDEVPVLAAAAAWAEGETYIPGLSELRVKESDRVRAIAENLRALGVEVEEGPDWLRIRGGGVRPGRVRPFHDHRIAMAFAVAGLPVGVEVEEPHWAEISYPGFFQDLLRLCAAS

Annotated regions:
phrase: CGPLRGRLRVPGDKSVTHRGLMLLALAEGEGRLFYPLKAGDTLSTARVLQALGAEVREEGPHFLVRGRGLRFQEPEDVLDCGNAGTLMRLLLGLLAGQEGLFAVLTGDASLRRRPMGRVVAPLRAMGARVDGREEGERAPLAVRGAPLRGLRYTLPVPSAQVKSALLLAGLFAEGVTEVEEPTPTRDHTERLFRHFGLPLEVEGRKVRTWRTGPFPAKDLVVPGDFSSAAFFLVAALVTPGSEVVVEGVGLNPTRTGLLTVLKAMGADLEWQVLEGEAGEPVGWVRARHSLLKGVAVDPGLIPLMVDEVPVLAAAAAWAEGETYIPGLSELRVKESDRVRAIAENLRALGVEVEEGPDWLRIRGGGVRPGRVRPFHDHRIAMAFAVAGLPVGVEVEEPHWAEISYPGFFQD
type: DOMAIN
name: Enolpyruvate_Tfrase_dom
description: Enolpyruvate transferase domain

phrase: RVKESDRVRAIAENLRAL
type: CONSERVED_SITE
name: EPSP_synthase_CS
description: 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site
Protein sequence:
MSDILDKIITVKREEIAAALESAPLEELKVQASARDSRDFVGALRDKHAAGHAAVIAEVKKASPSKGVLRKHFVPADIARSYAQHGAACLSVLTDERFFQGSARYLEQARAACALPVLRKDFIVDAYQVLEARAMGADAILLIAAALDTPLMIDLEAYAHSLGLAVLVEVHNRGELDEALKLKTPLVGINNRNLRTFETTIDTTLGMLDAIPDDRIVVTESGILSRADVERMEAAGVHTFLVGEAFMRAENPGAELARMFF

Annotated regions:
phrase: LDKIITVKREEIAAALESAPLEELKVQASARDSRDFVGALRDKHAAGHAAVIAEVKKASPSKGVLRKHFVPADIARSYAQHGAACLSVLTDERFFQGSARYLEQARAACALPVLRKDFIVDAYQVLEARAMGADAILLIAAALDTPLMIDLEAYAHSLGLAVLVEVHNRGELDEALKLKTPLVGINNRNLRTFETTIDTTLGMLDAIPDDRIVVTESGILSRADVERMEAAGVHTFLVGEAFMRAENPGAE
type: DOMAIN
name: Indole-3-glycerol_P_synth_dom
description: Indole-3-glycerol phosphate synthase domain

phrase: VIAEVKKASPSKGVLRKH
type: CONSERVED_SITE
name: Indole-3-GlycerolPSynthase_CS
description: Indole-3-glycerol phosphate synthase, conserved site

phrase: FVGALRDKHAAGHAAVIAEVKKASPSKGVLRKHFVPADIARSYAQHGAACLSVLTDERFFQGSARYLEQARAACALPVLRKDFIVDAYQVLEARAMGADAILLIAAALDTPLMIDLEAYAHSLGLAVLVEVHNRGELDEALKLKTPLVGINNRNLRTFETTIDTTLGMLDAIPDDRIVVTESGILSRADVERMEAAGVHTFLVGEAFMRAENPGAELAR
type: DOMAIN
name: Indole-3-glycerol_P_synth_dom
description: Indole-3-glycerol phosphate synthase domain

phrase: DILDKIITVKREEIAAALESAPLEELKVQASARDSRDFVGALRDKHAAGHAAVIAEVKKASPSKGVLRKHFVPADIARSYAQHGAACLSVLTDERFFQGSARYLEQARAACALPVLRKDFIVDAYQVLEARAMGADAILLIAAALDTPLMIDLEAYAHSLGLAVLVEVHNRGELDEALKLKTPLVGINNRNLRTFETTIDTTLGMLDAIPDDRIVVTESGILSRADVERMEAAGVHTFLVGEAFMRAENPGAELARMF
type: DOMAIN
name: Indole-3-glycerol_P_synth_dom
description: Indole-3-glycerol phosphate synthase domain
Protein sequence:
MSTRAPVELDFLGLRAAAADADDRHAKSGGSSASSSSSIRGMETSAIARIGPHLLRRVIAAAGPPPPPSTAPVPEEMPGAAAAAAPMTLFYNGSVAVFDVSHDKAEAIMRMATEATKAKGLARGNAIVGNFAKEPLTRTKSLQRFLSKRKERLTSLGPYQVGGPAAVGATTSTTTKSFLAKEEEHTAS

Annotated regions:
phrase: AAAAAAPMTLFYNGSVAVFDVSHDKAEAIMRMAT
type: DOMAIN
name: Tify_dom
description: Tify domain

phrase: PLTRTKSLQRFLSKRKERLTSLGPY
type: CONSERVED_SITE
name: CCT_CS
description: CO/COL/TOC1, conserved site

phrase: AAAAPMTLFYNGSVAVFDVSHDKAEAIMRM
type: DOMAIN
name: Tify_dom
description: Tify domain

phrase: AAAAAAPMTLFYNGSVAVFDVSHDKAEAIMRMAT
type: DOMAIN
name: Tify_dom
description: Tify domain
Protein sequence:
MKLLVATRSPGKVREIRELFAGLPFEIQFPADRFLERLPEEADLERGSTYTENATAKARYFAQRSGFPTVADDSGLEVDALGGAPGIHSARWARETGEGGAGGGGLDARNNALLLERLAGVPETQRTARYRCIVAYLETPSGIPEIVEASCEGFILPAPRGTGGFGYDPLFFSTDLRMSFGEAPPAAKHRVSHRGRAFRALIEVLLRRVK

Annotated regions:
Protein sequence:
MAIGNIAARYLSSLEETDTTATTTTTTTSNVLQPSNRLNSPTKFNRKSLDNNSQDLDALARALNITPSKPETPTSISKGSATSLLRTKFESPSATVSSFKSTSSSNGVSPTKKNHFVEITSDETPSWANKNYKDILNKSPTKFNTQSNVHTPLKQLNQPIGTPSSSSLSPAKNASKSSPGYEYLCRIEAIKQWLESVLQEQITQSASQLISYIRNGIHLAKLANVVLPTSKPVFLNDSKLQFKHTENINRFFQLLDFFNMPDLFRFELTDLYDAKNVPKVWFCLHALSYILHKQDPSYPAMNNLVGKVDFSADDIRTANRALVNSPLPNFSSADTGEGKSDTSNNNSSTTSATAAFMDKVTSPVKKTPSPLKRPQQLQKKQLELVEDNKPELTQDSSGLSKISRDDPFTDRVDLAPPSTSNAKLELHTPPSKSLEFKIKSPIIDLSHRDSDYYTPELESHLPNIIKFQSLARGAVFRYLMFVDRILLKSYQDEFTNLFAIIRGNKARRKTVHKHRDELRLYSFEIIELQSIIRKNFVINKKPNFTSITNDVETVELQSLIRGKLTRDWKKYVTNGLEKFTPQIIDFQSLVRMKSIYSKSNKVISYKDEILPSLIELQSIARSQLYHRFSRSNAIDETEIIKIQSIIRRNAVIEDLYTKLSKVRSNKRRLIELQSIARGGVARTKLCNSVLVTLIYEDGILNQLFAKIRGDNYRKKFNSQKSELLKYEKSSIIPVQTLFRGVLSRYTKEVTLSDIFDQIDSVITLQSVARGKLMRGSIYEFSDYYQKHIKQVVKAQAILQRVFAQNAYKQLITSKNPPLKVIRRFAPLLSNNDRDFQDEMTLSDLKDLIIEKCKANEEYENQIEQLDMKLGLLDKNKISIEEFLKPTKGKTFKPIVENVKNLERLNKSLKKKIELWQTLFYFIQTNPIYLTKLFNSIPYTKNQTKSGQDLFQSVIQLFPVRDSSITYHSREEYFLVKLMIQLMQNDTANSNNLGDITKLHLTNWIDFFTNFNNHTFQRQHLKALLGKFVIRIVDNEQVDFESDPIRIYNQIIDHEMKVYGRSEKSRDISPQAAIQLPEVSNKFVGNLMSLRETCSDLLSMLQKNASGNKALLQIPDHVKLICRQGYLCAQRKFPDKSDQQHLAVAGVIFVKHYLGSILQVPENYGILTGNNDTQKAKSKDNLRYLYRVMLQLFSMKPFNDNFLKPLNEYIMASTDTVKSIISQAIINVGEIETVYELHDYDDLVTHQRPKLTISVNSLIQLEKSILQNVDIITTGNDDQLYKTCVEVEKLLISPQDMLTLTDLSSVTLNLNPTTQEESIVDSKTKTLFTQAKRCLLYIIRVQEEDDSDDLLELLISGIKPSHEQRFKEIVQYEKAEQDISLNNSKSVTANTVNKKKSTRPYSGTSLGDLSNLTYHELKKMCLEIILKLESMGELTRKNSFQTLLNQIAMDIKTKDSQRQCRWQQLQVSQKTIKKLSEKENYLKTQLHNYKKHVESVLLELQSKSKSNDKNWKRRLFNIMVIPVFSKQYFYHRELRKHNRLPKFGSYKYSAKKLIDQKVLIDFSTANNVATASKLDFMFSCHQVGKFTIEVASGTVNIPGATNTITLDELLALQYENKTKFELFDGMATFDSNNFMGLIFRKFYDLKKE

Annotated regions:
phrase: RIEAIKQWLESVLQEQITQSASQLISYIRNGIHLAKLANVVLPTSKPVFLNDSKLQFKHTENINRFFQLLDFFNMPDLFRFELTDLYDAKNVPKVWFCLHA
type: DOMAIN
name: CH_dom
description: Calponin homology domain

phrase: LCRIEAIKQWLESVLQEQITQSASQLISYIRNGIHLAKLANVVLPTSKPVFLNDSKLQFKHTENINRFFQLLDFFNMPDLFRFELTDLYDAKNVPKVWFCLHALSYI
type: DOMAIN
name: CH_dom
description: Calponin homology domain

phrase: QHLKALLGKFVIRIVDNEQVDFESDPIRIYNQIIDHEMKVYGRSEKSRDISPQAAIQLPEVSNKFVGNLMSLRETCSDLLSMLQKNASGNKALLQIPDHVKLICRQGYLCAQRKFPDKSDQQHLAVAGVIFVKHYLGSILQVPENYGILTGNNDTQKAKSKDNLRYLYRVMLQLF
type: DOMAIN
name: RasGAP_dom
description: Ras GTPase-activating domain

phrase: YHELKKMCLEIILKLESMGELTRKNSFQTLLNQIAMDIKTKDSQRQCRWQQLQVSQKTIKKLSEKENYLKTQLHNYKKHVESVLLELQSKSKSNDKNWKRRLFNIMVIPVFSKQYFYHRELRKHNRLPKFGSYKYSAKKLIDQKVLIDFS
type: DOMAIN
name: RasGAP_C
description: RasGAP protein, C-terminal

phrase: IQLMQNDTANSNNLGDITKLHLTNWIDFFTNFNNHTFQRQHLKALLGKFVIRIVDNEQVDFESDPIRIYNQIIDHEMKVYGRSEKSRDISPQAAIQLPEVSNKFVGNLMSLRETCSDLLSMLQKNASGNKALLQIPDHVKLICRQGYLCAQRKFPDKSDQQHLAVAGVIFVKHYLGSILQVPENYGILTGNNDTQKAKSKDNLRYLYRVMLQLF
type: DOMAIN
name: RasGAP_dom
description: Ras GTPase-activating domain
Protein sequence:
MSDLALKARELDSGDQLADKRAEFVLDEVVYLDGNSLGALPAAVPGRVEDVVRRQWGELRIRSWDESGWWTAPERIGDRIAPLVGAAAGQIVVGDSTSVNVFKALVGAVRIAGEGRDEILVDATTFPTDGYLAGSAARMTGRTLRPVLPAQVPDALSDRTAAVLLNHVDYRTGRLHDLPSLTAAVRAAGAVSVWDLCHSAGALPVGLDEHGVDLAVGCTYKYLNGGPGSPAYLYVRGGLQDRFDSPLPGWNSHAEPFGMRGDYEPATGAVRGRVGTPDILSMLALEAALDVWEGVSIEAVRAKSLSLTDFFLECVAEYVPEGRVESLTPARHEERGSQVALRCSDAGEVMRQLVERGVVGDFRRPDVLRFGFTPLYVGFADVERAARVLGEILG

Annotated regions:
Protein sequence:
MLFYITVTVLLVSAQAKFYTDCGSKLATVQSVGVSGWPENARECVLKRNSNVTISIDFSPTTDVSAITTEVHGVIMSLPVPFPCRSPDACKDNGLTCPIKAGVVANYKTTLPVLKSYPKVSVDVKWELKKDEEDLVCILIPARIH

Annotated regions:
phrase: YTDCGSKLATVQSVGVSGWPENARECVLKRNSNVTISIDFSPTTDVSAITTEVHGVIMSLPVPFPCRSPDACKDNGLTCPIKAGVVANYKTTLPVLKSYPKVSVDVKWELKKDEEDLVCILIP
type: DOMAIN
name: ML_Npc2-like
description: Npc2 like, ML domain

phrase: YTDCGSKLATVQSVGVSGWPENARECVLKRNSNVTISIDFSPTTDVSAITTEVHGVIMSLPVPFPCRSPDACKDNGLTCPIKAGVVANYKTTLPVLKSYPKVSVDVKWELKKDEEDLVCILIPAR
type: DOMAIN
name: ML_dom
description: MD-2-related lipid-recognition domain

phrase: YTDCGSKLATVQSVGVSGWPENARECVLKRNSNVTISIDFSPTTDVSAITTEVHGVIMSLPVPFPCRSPDACKDNGLTCPIKAGVVANYKTTLPVLKSYPKVSVDVKWELKKDEEDLVCILIP
type: DOMAIN
name: ML_dom
description: MD-2-related lipid-recognition domain
Protein sequence:
MPRLILIRHGQSQWNLENRFTGWWDVDVTEKGAAEAFAAGKLLKDKGVLPTLAFTSLQTRAIKTLHLALEAAGRLWVQEDKDWRLNERHYGGLTGLDKAETAAKHGDEQVKVWRRSFDVPPPPLEAGSEFDLASDPRYDGIAVPATESLKDTIARVLPCWEEKIAPALRAGETVIVSAHGNSLRALVKHLSGISDEDITGLEIPTGQPIVYELDNDLAQVERYYLSER

Annotated regions:
phrase: LIRHGQSQW
type: ACTIVE_SITE
name: PG/BPGM_mutase_AS
description: Phosphoglycerate/bisphosphoglycerate mutase, active site
Protein sequence:
MRILEIFAILLILKEVRPQTKRSHKVNMKTPFQKRKNHHLNTDSRATLMSPADLHSVEHSIVQIRDPTLIPHYDQKSQEDMKLHFLKNTLVTCNDGTTAGYYLRETKGSKRWIIFLEGGWCCYSKETCGVRYDNVKRLMSSSNWPQTRKGTGILSPRQDENPYWWNVNAVFVPYCSSDVWSGNVSKTQDGYAFMGSVIIQEVIRDLVPRGMKQAKSVILAGSSAGGTGVLINIDRVAALVEETTSESVQVRGLVDSGWFLDSRHSKQSDCLDISKCALTEAIKKGLKLWNGILPENCKQQFKKGDEWRCFYGPRLFTSMKSPIFVVQWLYDQEQLRIENIQTEFQSMTENQWNSIQNIGREFKKSLREVPAVFAPACLSHTLITKSNWLEFQVKSVTLAKALHCWDRSLQENRAPKGVIRGCPFHLVDNCQWPHCNPTCPAIYDATSGQELSILQMFLKLRLESQRRGQEPKGDLGPLMSMLRNSG

Annotated regions:
Protein sequence:
MSENESDTEAELEENAPDEAAADAESTAQTDEQTPDTEADEPAPESTATEDVMSDEEADLLIPVEDYLGAGVHIGTQQKTNDMDRFIHRVRTDGLYVLDVSRTDDRVRTAADFLANYDPEQILVTSSRQYGRFPAEKFAEAVGARARTGRFIPGTLTNPDYDGYIEPDVLVVTDPIGDSQAVKEAITVGIPVIAMCDSNNQTGNVDLVVPTNNKGRRALSVVYWLLANETLDRRGAEPTYGLDDFEDGL

Annotated regions:
phrase: VEDYLGAGVHI
type: CONSERVED_SITE
name: Ribosomal_uS2_CS
description: Small ribosomal subunit protein uS2, conserved site

phrase: PDVLVVTDPIGDSQAVKEAITVGI
type: CONSERVED_SITE
name: Ribosomal_uS2_CS
description: Small ribosomal subunit protein uS2, conserved site