nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MKKIYYKNHLIKKKWSQVFLKDQNVIDTIVKTINPKKHQKILEIGPGLGALTKQILNIADLDSLILIERDSNLVNRLVQMFNKKINILHQDIMTTNFFDLSHKVGQKLRLIGNLPYNIATELIVYLFQYTNVIYDMHFMFQKEVATRLYANPNKKEYGRLSIITQYHCKVVPLLTIPATSFFPIPKVESMVMRLLPHTNTPYPIVNIGKLSSLTKLAFRQRRKTLRNSLSTFFNETEITQKGINPALRAENITINQYCTLANMLNNK

Annotated regions:
phrase: ILEIGPGLGALTKQILNIADLDSLILIER
type: CONSERVED_SITE
name: rRNA_Ade_Mease_Trfase_CS
description: Ribosomal RNA adenine methylase transferase, conserved site

phrase: VIDTIVKTINPKKHQKILEIGPGLGALTKQILNIADLDSLILIERDSNLVNRLVQMFNKKINILHQDIMTTNFFDLSHKVGQKLRLIGNLPYNIATELIVYLFQYTNVIYDMHFMFQKEVATRLYANPNKKEYGRLSIITQYHCKVVPLLTIPATSFFPIPKVESMVMRLLPH
type: DOMAIN
name: rRNA_Ade_methylase_Trfase_N
description: Ribosomal RNA adenine methylase transferase, N-terminal
Protein sequence:
MATSISTQRGQVFIGELPQDFLRIAPTQQQQQIQLDAQAAQQLQYSGVMGTMGRLSITVVQAKLAKNYGMTRMDPYCRIRLGYAVYETPTAHNGAKNPRWNKVIQCTIPPGVDSFYLEIFDERAFSMDDRIAWTHITIPETLKEGKHVDEWFSLSGRQGDDKEGMINLVMSYTSVPAMMPAQPVVLMPTVYQQGVGYVPIAGPVYNPGMPMIASPPAVNPQHQTQEVDIQSIKDMFPTIDPEVIRSVLEAQGGNRDAAINSLLQMVEDS

Annotated regions:
phrase: LDAQAAQQLQYSGVMGTMGRLSITVVQAKLAKNYGMTRMDPYCRIRLGYAVYETPTAHNGAKNPRWNKVIQCTIPPGVDSFYLEIFDERAFSMDDRIAWTHITIPETLKEGKHVDEW
type: DOMAIN
name: C2_dom
description: C2 domain

phrase: RLSITVVQAKLAKNYGMTRMDPYCRIRLGYAVYETPTAHNGAKNPRWNKVIQCTIPPGVDSFYLEIFDERAFSMDDRIAWTHITIPETLKEGKHVD
type: DOMAIN
name: C2_dom
description: C2 domain

phrase: MGRLSITVVQAKLAKNYGMTRMDPYCRIRLGYAVYETPTAHNGAKNPRWNKVIQCTIPPGVDSFYLEIFDERAFSMDDRIAWTHITIPETLKEGKHVDEWFSLSGRQGDDKEGMINLVMS
type: DOMAIN
name: Tollip_C2
description: Toll-interacting protein, C2 domain

phrase: TQEVDIQSIKDMFPTIDPEVIRSVLEAQGGNRDAAINSLLQM
type: DOMAIN
name: CUE
description: Ubiquitin system component CUE

phrase: TQEVDIQSIKDMFPTIDPEVIRSVLEAQGGNRDAAINSLLQMV
type: DOMAIN
name: CUE
description: Ubiquitin system component CUE

phrase: GRLSITVVQAKLAKNYGMTRMDPYCRIRLGYAVYETPTAHNGAKNPRWNKVIQCTIPPGVDSFYLEIFDERAFSMDDRIAWTHITIPETLKEGKHVDEWFS
type: DOMAIN
name: C2_dom
description: C2 domain

phrase: DIQSIKDMFPTIDPEVIRSVLEAQGGNRDAAINSLLQ
type: DOMAIN
name: CUE
description: Ubiquitin system component CUE

phrase: EVDIQSIKDMFPTIDPEVIRSVLEAQGGNRDAAINSLLQ
type: DOMAIN
name: TOLIP_CUE
description: Toll-interacting protein, CUE domain
Protein sequence:
MGARASVLSGGELDRWEKIRLRPGGKKKYKLKHIVWASRELERFAVNPSLLETSEGCRQILGQLQSSLQTGSEELKSLYNTVATLYCVHQRIEVKDTKEALDKIEEEQNKSKKKAQQAAADTGNSSQVSQNYPIVQNIQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRLHPVQAGPVAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPSSILDIKQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSATIMMQRGNFRNQRKTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFLQSRPEPTAPPEESFRFGEETTTPSQKQEPIDKELYPLASLRSLFGNDPSSQ

Annotated regions:
phrase: RASVLSGGELDRWEKI
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: RPGGKKKYKLKHIVWASR
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: ERFAVNPSLLETSEG
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: TGSEELKSLYNTVATLYCV
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: HQRIEVKDTKEAL
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: MYSPSSILDIKQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPGATLEEMMT
type: DOMAIN
name: Gag_p24_C
description: Retroviral nucleocapsid Gag protein p24, C-terminal domain

phrase: PSSILDIKQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGHKARVLAEAMSQVTNSATIMMQRGNFRNQRKTVKCFNCGKEGHIAKNCRAPRKKGCWKCGKEGHQMKDCTERQANFLGKIWPSHKGRPGNFL
type: DOMAIN
name: Primate_lentivir_Gag_pol-like
description: Primate lentivirus group Gag polyprotein-like

phrase: GCWKCGKEGHQMKDCT
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: KCFNCGKEGHIAKNC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: GCWKCGKEGHQMKDCT
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: KCFNCGKEGHIAKNCR
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: LQSRPEPTAPPEESFRFGEETTTPSQKQEPIDKELYP
type: DOMAIN
name: Gag_p6
description: Gag protein p6

phrase: GARASVLSGGELDRWEKIRLRPGGKKKYKLKHIVWASRELERFAVNPSLLETSEGCRQILGQLQSSLQTGSEELKSLYNTVATLYCVHQRIEVKDTKEALDKIEEEQNKSKKKAQQAAADTGNSSQVSQN
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: KCFNCGKEGHIAKNC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: CWKCGKEGHQMKDCT
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type
Protein sequence:
MRGFKMTKLLIATTNQGKVKELNQLLKDADYEIVSLADLENPPHVQETGRTFEQNAKLKAHSLAEYSQMPTIADDSGLCVKALHNAPGVFSARYAGEPQNPARNNAKLLSELGGVPDEKRQASFHTTIVVSFPNQPENDLVVEGELSGQITAIPRGDGGFGYDPLFFVEDKQKTLAEMTLDEKNEISHRGIAFKQLAEKLPQWLKDCQK

Annotated regions:
Protein sequence:
MVIQRKYRASRRLGVSLWGRSKDPFNTRNYPPGQHGNMGYKKPSDFGKQFGAHKKFKFYYAISSKQMRNMFLKAYKKKGDTGDNFVGLLESMLSSVLYNSGLVPTIFSARQLISHKHVLVNGKVVNISSYSVKPGDTIKLREKAVNLPPVLAAIDAQEQKVPDYLEVDVKERSVKYLRVPKYYEVPYPANMEVNLVIEFYSR

Annotated regions:
phrase: QRKYRASRRLGVSLWGRSKDPFNTRNYPPGQHGNMGYKKPSDFGKQFGAHKKFKFYYAISSKQMRNMFLKAYKKKGDTGDNFVGLL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: SMLSSVLYNSGLVPTIFSARQLISHKHVLVNGKVVNISSYSVKPGDTIKLREKAVNLPPVLAAI
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: QRKYRASRRLGVSLWGRSKDPFNTRNYPPGQHGNMGYKKPSDFGKQFGAHKKFKFYYAISSKQMRNMFLKAYKKKGDTGDNFVGLL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: SVLYNSGLVPTIFSARQLISHKHVLVNGKVVNISSYSVKPGDT
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain
Protein sequence:
MLAVCARHGPAKLPPPPPPLAGERAAAWVVGRWWWRPAAAGRRGVVAARASFFSSRIGLDSQNYHTRDLSQLLWVGPVPGDIAEIEAYCRIFRAAEQLHTAVMSALCDPETGECPVRYDVQTEDLPVLEDKVAAVLGCMLALLNRGRKEVLSGRSGVASAFQGSEDSTMDKIPPLALFRGDLKRCCESMQVALASYLVPSEARGLDIWRKLQRLKNACYDAGFPRADGHPCPTLFANWFPVYFSTVPDDSLSDELEVAFWRGGQVSEEGLEWLLLKGFKTIVDLREEDVKDDLYLSAIHEAVSLGKIEVVNLPVEIGTAPSAEQVQRFAEIVSDSAKKPIYLHSQEGISRTSAMVSRWKQYVTRAERLATQNRSLNGNGKHVRNDQTEQLTNSPGFSSEGSENGTPLESDRTMEGETCDIDIETARHNLEITNSLPSEQSTEQGELHGTRTELQSNFRLESNPLKAQFPSCDVFSKKGMTDFFRSKKVYPKSVLNPRRRSNSLLVSRRKQSLSAEQNGAIDYEAAEFKVLKSSNGASFDNDYILSVASGITNGKPSNNGASTSVEDREMETSVVTVDPRTSDTSNSNGNAPLGSQKSAERNGSLYVEREKSDHVDGNMCASATGVVRLQSRRKAEMFLVRTDGFSCTREKVTESSLAFTHPSTQQQMLMWKSPPKTVLLLKKLGDELMEEAKEVASFLHHQEKMNVLVEPDVHDIFARIPGYGFVQTFYTQDTSDLHERVDFVACLGGDGVILHASNLFRTSVPPVVSFNLGSLGFLTSHNFEGFRQDLRAVIHGNNTLGVYITLRMRLRCEIFRNGKAMPGKVFDVLNEVVVDRGSNPYLSKIECYEHNHLITKVQGDGVIVATPTGSTAYSTAAGGSMVHPNVPCMLFTPICPHSLSFRPVILPDSARLELKIPDDARSNAWVSFDGKRRQQLSRGDSVQISMSQHPLPTVNKSDQTGDWFRSLIRCLNWNERLDQKAL

Annotated regions:
phrase: PCPTLFANWFPVYFSTVPDDSLSDELEVAFWRGGQVSEEGLEWLLLKGFKTIVDLREEDVKDDLYLSAIHEAVSLGKIEVVNLPVEIGTAPSAEQVQRFAEIVSDSAKKPIYLHSQEGISRTSAMVSRWKQYVTRAERLATQNRSLNGNGKHVRND
type: DOMAIN
name: PTP-NADK
description: DSP-PTPase phosphatase fused to NAD+ Kinase
Protein sequence:
MATQTVADYLARTLSGAGVERIWGVTGDSLNGLAYSLDQVGTIRWMHTRHEEVAAFAAGADAAASGRLAVCAGSCGPGNLHLINGLFDCHRNQQPVLAIAAHIPSTEIGLGYFQETHPQDLFRECSHFVELVSNASQFPRVLERAMRAATEERGVAVIVLPGDVALSECRVPVPEWNLGEPSSILPSEPDIDRLASMLNGCEAVTIMCGSGVAGAHAEVVQLADTLGAPIVHALRGKQFIEYDNPFDVGMTGLIGFSSGYHAMMSCDTLLLLGCDFPYRPFYPPEAKVVQIDRKGSQLGRRTPLALGLVGTVKETVAALLPRLQRKTDRTFIDKARKHYLSARKGLDELATPAGPGRPIHPQYLTRMIDEIASDDAIFSADVGTPTLWAARYLTMNGRRQLHGSFNHGSMANAMPQALGAQAAHPDRMVVSLSGDGGLSMLLGDLLSARQLDLPIKVVVFNNSLLGFVSMELKAGGYLDTNVDLSKTDFAAIAHGAGIFSVRVTESEALESALKEAFAHPGPALVDVVTSKHELALPPSIELAQAKGFSLYMLRAVLSGRGDEIVELARTNLR

Annotated regions:
phrase: IDRLASMLNGCEAVTIMCGSGVAGAHAEVVQLADTLGAPIVHALRGKQFIEYDNPFDVGMTGLIGFSSGYHAMMSCDTLLLLGCDFPYRPFYPPEAKVVQIDRKGSQLGRRTPLALGLVGTVKETVAA
type: DOMAIN
name: Thiamin_PyroP_enz_cen_dom
description: Thiamine pyrophosphate enzyme, central domain

phrase: TVADYLARTLSGAGVERIWGVTGDSLNGLAYSLDQVGTIRWMHTRHEEVAAFAAGADAAASGRLAVCAGSCGPGNLHLINGLFDCHRNQQPVLAIAAHIPSTEIGLGYFQE
type: DOMAIN
name: Thiamin_PyroP_enz_TPP-bd_dom
description: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain

phrase: PIHPQYLTRMIDEIASDDAIFSADVGTPTLWAARYLTMNGRRQLHGSFNHGSMANAMPQALGAQAAHPDRMVVSLSGDGGLSMLLGDLLSARQLDLPIKVVVFNNSLLGFVSMELKAGGYLDTNVDLSKTDFAAIAHGAGIFSVRVTESEALESALKEAFAHPGPALVDVVTSKHEL
type: DOMAIN
name: TPP_POXB-like
description: Pyruvate oxidase POXB-like, PP-binding domain

phrase: TVADYLARTLSGAGVERIWGVTGDSLNGLAYSLDQVGTIRWMHTRHEEVAAFAAGADAAASGRLAVCAGSCGPGNLHLINGLFDCHRNQQPVLAIAAHIPSTEIGLGYFQETHPQDLFRECSHFVELVSNASQFPRVLERAMRAATEERGVAVIVLPGDVALS
type: DOMAIN
name: TPP_PYR_POXB-like
description: Pyruvate oxidase POXB-like, pyrimidine-binding domain

phrase: DVGTPTLWAARYLTMNGRRQLHGSFNHGSMANAMPQALGAQAAHPDRMVVSLSGDGGLSMLLGDLLSARQLDLPIKVVVFNNSLLGFVSMELKAGGYLDTNVDLSKTDFAAIAHGAGIFSVRVTESEALESALKEAFAHPGPALVD
type: DOMAIN
name: TPP_enzyme_TPP-bd
description: Thiamine pyrophosphate enzyme, TPP-binding

phrase: LGAQAAHPDRMVVSLSGDG
type: CONSERVED_SITE
name: TPP-bd_CS
description: TPP-binding enzyme, conserved site
Protein sequence:
MMLIRVLANLLILQLSYAQKSSELVIGGDECNINEHRSLVVLFNSSGALCGGTLINQEYVLTAAHCDMPNMQILLGVHSASVLNDDEQARDPEEKYFCLSSNNDTKWDKDIMLIRLNRPVNNSVHIAPLTLPSSPPRLGAICRIMGWGAITSPNETYPDASQCANINILRYSLCQAVYRGMPAQSRIVCAGILRGGKGSCKGDSGGPLICNAQLQGIVSAGGDPCAQPRVPVLYIRVFDYTDWIQSIIEGNRTVTCPP

Annotated regions:
phrase: LTAAH
type: ACTIVE_SITE
name: TRYPSIN_HIS
description: Serine proteases, trypsin family, histidine active site

phrase: VIGGDECNINEHRSLVVLFNSSGALCGGTLINQEYVLTAAHCDMPNMQILLGVHSASVLNDDEQARDPEEKYFCLSSNNDTKWDKDIMLIRLNRPVNNSVHIAPLTLPSSPPRLGAICRIMGWGAITSPNETYPDASQCANINILRYSLCQAVYRGMPAQSRIVCAGILRGGKGSCKGDSGGPLICNAQLQGIVSAGGDPCAQPRVPVLYIRVFDYTDW
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain

phrase: VIGGDECNINEHRSLVVLFNSSGALCGGTLINQEYVLTAAHCDMPNMQILLGVHSASVLNDDEQARDPEEKYFCLSSNNDTKWDKDIMLIRLNRPVNNSVHIAPLTLPSSPPRLGAICRIMGWGAITSPNETYPDASQCANINILRYSLCQAVYRGMPAQSRIVCAGILRGGKGSCKGDSGGPLICNAQLQGIVSAGGDPCAQPRVPVLYIRVFDYTDWIQSII
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain

phrase: LVIGGDECNINEHRSLVVLFNSSGALCGGTLINQEYVLTAAHCDMPNMQILLGVHSASVLNDDEQARDPEEKYFCLSSNNDTKWDKDIMLIRLNRPVNNSVHIAPLTLPSSPPRLGAICRIMGWGAITSPNETYPDASQCANINILRYSLCQAVYRGMPAQSRIVCAGILRGGKGSCKGDSGGPLICNAQLQGIVSAGGDPCAQPRVPVLYIRVFDYTDW
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain

phrase: VIGGDECNINEHRSLVVLFNSSGALCGGTLINQEYVLTAAHCDMPNMQILLGVHSASVLNDDEQARDPEEKYFCLSSNNDTKWDKDIMLIRLNRPVNNSVHIAPLTLPSSPPRLGAICRIMGWGAITSPNETYPDASQCANINILRYSLCQAVYRGMPAQSRIVCAGILRGGKGSCKGDSGGPLICNAQLQGIVSAGGDPCAQPRVPVLYIRVFDYTDWIQS
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain

phrase: GSCKGDSGGPL
type: ACTIVE_SITE
name: TRYPSIN_SER
description: Serine proteases, trypsin family, serine active site
Protein sequence:
MQFFARIEQLSEQKRSLLCVGLDPDPRKLPAWTSDDPDPVFAFNRHIIDLTCDLVIAYKPNAAFYEALGPHGWQTLADTIKYAHQCGVPVILDAKRGDIGSSATAYATAAFQQLGADAITVSPYMGWDSVEPFVRYAERGVFVLALTSNPGAQDFQCADSHGHPLYQRVAEQCTGWNERGNVGLVVGATYADDICCVRSITADQWLLLPGIGAQGGDLHLALENGLRSDGSGVLVNVGRAVLYADDPREAAMQLRDEIETIRAAKRASHQDCATETKQRADHPNLTDLALALYDQGAIQFGDFTLHSGVQSPFYIDLRLLVSNPHALAMAARAYVDLLDNLFFDRLAGIPYAGLPLATAVALQTCTPLIYPRKEAKPYGTGRIIEGTFEPDETIVVIDDLISNGASKITAIEPLEAAGLRVHDVVVLLDREGSGREELAKAGYTLHSVFRLHELVDILLEHGRIVVEQHELVTHYLNNQPLTPAV

Annotated regions:
phrase: LLCVGLDPDPRKLPAWTSDDPDPVFAFNRHIIDLTCDLVIAYKPNAAFYEALGPHGWQTLADTIKYAHQCGVPVILDAKRGDIGSSATAYATAAFQQLGADAITVSPYMGWDSVEPFVRYAERGVFVLALTSNPGAQDFQCADSHGHPLYQRVAEQCTGWNERGNVGLVVGATYADDICCVRSITADQWLLLPGIGAQGGDLHLALENGLRSDGSGVLVNVGRAVLYADDPREAA
type: DOMAIN
name: OMPdeCOase_dom
description: Orotidine 5'-phosphate decarboxylase domain

phrase: AMAARAYVDLLDNLFFDRLAGIPYAGLPLATAVALQTCTPLIYPRKEAKPYGTGRIIEGTFEPDETIVVIDDLISNGASKITAIEPLEAAGLRVHDVVVLLDREGSGREELAKAGYTLHSV
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: LLCVGLDPDPRKLPAWTSDDPDPVFAFNRHIIDLTCDLVIAYKPNAAFYEALGPHGWQTLADTIKYAHQCGVPVILDAKRGDIGSSATAYATAAFQQLGADAITVSPYMGWDSVEPFVRYAERGVFVLALTSNPGAQDFQCADSHGHPLYQRVAEQCTGWNERGNVGLVVGATYADDICCVRSITADQWLLLPGIGAQGGDLHLALENGLRSDGSGVLVNVGRAVLYADDPREAAMQ
type: DOMAIN
name: OMPdeCOase_dom
description: Orotidine 5'-phosphate decarboxylase domain

phrase: YDQGAIQFGDFTLHSGVQSPFYIDLRLLVSNPHALAMAARAYVDLLDNLFFDRLAGIPYAGLPLATAVALQTCTPLIYPRKEAKPYGTGRIIEGTFEPDETIVVIDDLISNGASKITAIEPLEAAGLRVHDVVVLLDREGSGREELAKAGYTLHSVFRLH
type: DOMAIN
name: Or_phspho_trans_dom
description: Orotate phosphoribosyl transferase domain
Protein sequence:
MPRSQRNDNFIDKTFTVVADILVKVLPTSNREKQAFTYYRDGMAAQAEGEYAEALQNYYQALRLEIDPYDRSYILYNIGLIYTCNGEHGRALEYYYQALERNPSLPQALNNIAVIYHYRGEQAIERGQSEISKLLFDKAADYWKEAIRLAPTNYLEAQSWLNQYTN

Annotated regions:
phrase: YILYNIGLIYTCNGEHGRALEYYYQALERNP
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: SYILYNIGLIYTCNGEHGRALEYYYQALERNPS
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: AFTYYRDGMAAQAEGEYAEALQNYYQALRLEID
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: GEQAIERGQSEISKLLFDKAADYWKEAIRLAPT
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: SYILYNIGLIYTCNGEHGRALEYYYQALERNPS
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: AFTYYRDGMAAQAEGEYAEALQNYYQALRLEID
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat
Protein sequence:
MFITTWCSNDAPDSSVPRTRSKTKFTPKVRDLLFHCRYEIVDIVDEGYDMPASIGFYNDIIREFVTDDFCLTSLFEDNGQDSNNIQHRNDGCIWSIFDRLMNTNKFRDFDVIQGTFDTLQIIFFTNHESANNFIKNNLPRFMQTLHKLIACSNFFIQAKSFKFLNELFTAQTNYETRSLWMAEPAFIKLVVLAIQSNKHAVRSRAVSILEIFIRNPRNSPEVHEFIGRNRNVLIAFFFNSAPIHYYQGSPNEKEDAQYARMAYKLLNWDMQRPFTQEQLQDFEEGWTHQKKMREEQLVRTCFHDNNPRLPKVNHVYRTRIIPNQQFLREPLKFGNPFRQ

Annotated regions:
Protein sequence:
MKYVIVTGGVMSGLGKGITSSSIGRILKNKGYAVTAVKIDPYINIDAGTMNPFQHGEVFVLKDGGEVDLDLGNYERFLDTELSSDHNITTGKIYKAVIEKERRGDYLGGTVQIIPHITNEIKERIRAVAERSGAEICLIEVGGTVGDIESMPFLEAARQMQREEAVHDLALVHVTLVPDDIQGEQKTKPTQHSVKELRELGLYPNIIVARCSSVLSAEVKEKIALFCDVPANAIISAPDVEDVYHVPLIFEKEGLSEYLAEKLELKKDGNQSGWRKLVGRMDEINKSGKKISIAVVGKYIDIRDAYTSIRESLKHAGIVCGCKVGIEWIDSDSLDAPEMVRRSLESFDGILVPGGFGGRGIEGKIRAIEYARKNDVPFLGLCLGMQLAVVEFARDVLGLHDANSSEFGSTAHPVIDLLPEQHDVTDMGGSMRLGNYEAVLVEGSLARRLYGDARIVERHRHRYEVNPKYIDQFESNGMVFSGKNKNRMEIMEIPSHRFFIGCQFHPEFKSRPGKPAPLFKGFVEAAAENQ

Annotated regions:
phrase: ISIAVVGKYIDIRDAYTSIRESLKHAGIVCGCKVGIEWIDSDSLDAPEMVRRSLESFDGILVPGGFGGRGIEGKIRAIEYARKNDVPFLGLCLGMQLAVVEFARDVLGLHDANSSEFGSTAHPVIDLLPEQHDVTDMGGSMRLGNYEAVLVEGSLARRLYGDARIVERHRHRYEVNPKYIDQFESNGMVFSGKNKNRMEIMEIPSHRFFIGCQFHPEFKSRPGKPAPLFKGF
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain

phrase: KYVIVTGGVMSGLGKGITSSSIGRILKNKGYAVTAVKIDPYINIDAGTMNPFQHGEVFVLKDGGEVDLDLGNYERFLDTELSSDHNITTGKIYKAVIEKERRGDYLGGTVQIIPHITNEIKERIRAVAERSGAEICLIEVGGTVGDIESMPFLEAARQMQREEAVHDLALVHVTLVPDDIQGEQKTKPTQHSVKELRELGLYPNIIVARCSSVLSAEVKEKIALFCDVPANAIISAPDVEDVYHVPLIFEKEGLSEYLAEKLE
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: KYVIVTGGVMSGLGKGITSSSIGRILKNKGYAVTAVKIDPYINIDAGTMNPFQHGEVFVLKDGGEVDLDLGNYERFLDTELSSDHNITTGKIYKAVIEKERRGDYLGGTVQIIPHITNEIKERIRAVAERSGAEICLIEVGGTVGDIESMPFLEAARQMQREEAVHDLALVHVTLVPDDIQGEQKTKPTQHSVKELRELGLYPNIIVARCSSVLSAEVKEKIALFCDVPANAIISAPDVEDVYHVPLIFEKEGLSEYLA
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: IRDAYTSIRESLKHAGIVCGCKVGIEWIDSDSLDAPEMVRRSLESFDGILVPGGFGGRGIEGKIRAIEYARKNDVPFLGLCLGMQLAVVEFARDVLGLHDANSSEFGSTAHPVIDLLPEQHDVTDMGGSMRLGNYEAVLVEGSLARRLYGDARIVERHRHRYEVNPKYIDQFESNGMVFSGKNKNRMEIMEIPSHRFFIGCQFHPEFKSRPGKPAPLFKGFV
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase
Protein sequence:
MQTRNAFSWLKKQITRSISVSLMIYILTRTSISSAYPIFAQQGYENPREATGRIVCANCHLANKPVEIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELAPSDRISPEMKEKIGNLSFQSYRPNKKNILVIGPVPGKKYSEITFPILSPDPATKKDVHFLKYPIYVGGNRGRGQIYPDGSKSNNTVYNATAAGIVSKIIRKEKGGYEITITDASEGRQVVDIIPPGPELLVSEGESIKFDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLLFFLASVILAQIFLVLKKKQFEKVQLAEMNF

Annotated regions:
phrase: YPIFAQQGYENPREATGRIVCANCHLANKPVEIEVPQAVLPDTVFEAVVRIPYDMQLKQVLANGKKGGLNVGAVLILPEGFELAPSDRISPEMKEKIGNLSFQSYRPNKKNILVIGPVPGKKYSEITFPILSPDPATKKDVHFLKYPIYVGGNR
type: DOMAIN
name: Cyt_f_lg_dom
description: Cytochrome f large domain
Protein sequence:
MINIWTEKYRPKRLDDVIGEDENINTLKSFVKNGDLPHLIFAGPAGTGKTSTAIALTIELFGDDWKENFLELNASDERGIDIIRNNIKDFAKIRPSNKLGFKIIFLDEADQLTNEAQAALRRTMEMFYSTTRFIFSCNYSSKIIPPIQSRCVVLRFRPLDKEAMERKLREIAKNEKFDIDDDSLDAIYEISDGDMRKAINVMQAIQSTGEIKPSKIYEISGEINKNEYKNLISLSLNGAFSDAKSLLDKMLVDYGLSGIDIIRGMHSAIRNERIANRQKLEILIALAEFEFRISQGGSDNVQMDALLARISYIGSEIT

Annotated regions:
phrase: LIFAGPAGTGKTSTAIALTIELFGDDWKENFLELNASDERGIDIIRNNIKDFAKIRPSNKLGFKIIFLDEADQLTNEAQAALRRTMEMFYSTTRFIFSCNYSSKIIPPIQSRCVVL
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: DLPHLIFAGPAGTGKTSTAIALTIELFGDDWKENFLELNASDERGIDIIRNNIKDFAKIRPSNKLGFKIIFLDEADQLTNEAQAALRRTMEMFYSTTRFIFSCNYSSKIIPPIQSRCVVLRFRPL
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LDKEAMERKLREIAKNEKFDIDDDSLDAIYEISDGDMRKAINVMQAIQSTGEIKPSKIYE
type: DOMAIN
name: RFC_lid
description: Replication factor C, lid domain

phrase: KNEYKNLISLSLNGAFSDAKSLLDKMLVDYGLSGIDIIRGMHSAIRNERIANRQKLEILIALAEFEFRISQGGSDNVQMDALLA
type: DOMAIN
name: Rep_factorC_C
description: Replication factor C, C-terminal
Protein sequence:
MTLDLSKPATAGYLSGFANEFATEALPGALPHGRNSPQRAPYGLYAEQLSGTAFTAPRGHNRRSWLYRIRPAAVHRPFEPFTGPQRLVSEFGDSADVPPTPPNQLRWDPLPMPVEPTDFVEGLVTMAGNGSAAAMNGCAIHLYAANRSMQDRFFYSADGELLIVPQQGRLFIATEFGRLDVEPFEIAVIPRGVRFSVALPDGDARGYICENFGALLRLPDLGPIGSNGLANPRDFLTPQAAYEDREGAFELVAKLNGRLWRADIGHSPFDVVAWHGNYAPYKYDLRLFNTIGSISFDHPDPSIFLVLQSQSDTPGVDAIDFVIFPPRWLAAEDTFRPPWFHRNVASEFMGLVHGAYDAKAEGFVPGGASLHNCMSGHGPDADTFEKASASDTTKPHKVDATMAFMFETRTLIRPTRYALDTAQLQPDYFECWQGIRKHFNPEQP

Annotated regions:
phrase: LFNTIGSISFDHPDPSIFLVLQSQSDTPGVDAIDFVIFPPRWLAAEDTFRPPWFHRNVASEFMGLVHGAYDAKAEGFVPGGASLHNCMSGHGPDADTFEKASASDTTKPHKVDATMAFMFETRTLIRPTRYALDTAQLQPDYFECWQGIRKH
type: DOMAIN
name: HgmA_C
description: Homogentisate 1,2-dioxygenase, C-terminal domain

phrase: YLSGFANEFATEALPGALPHGRNSPQRAPYGLYAEQLSGTAFTAPRGHNRRSWLYRIRPAAVHRPFEPFTGPQRLVSEFGDSADVPPTPPNQLRWDPLPMPVEPTDFVEGLVTMAGNGSAAAMNGCAIHLYAANRSMQDRFFYSADGELLIVPQQGRLFIATEFGRLDVEPFEIAVIPRGVRFSVALPDGDARGYICENFGALLRLPDLGPIGSNGLANPRDFLTPQAAYEDREGAFELVAKLNGRLWRADIGHSPFDVVAWHGNYAPYKYD
type: DOMAIN
name: HgmA_N
description: Homogentisate 1,2-dioxygenase, N-terminal domain
Protein sequence:
MRSTLITDIAELTTVDPEGRVLTDAAVVVEDERIAWIGPAADAPDADDRVSVEGRAVLPGWVDSHTHLVFDGDRSAEFEARMAGESYAAGGIGVTTSATRAASDDRLAELVRGRVADAVAGGTTYLETKTGYGLTVEEEARHARLLAGLREEGLVDEVTFLGAHLVPPGRDAEDYLDDVVGPMLEAVREHAGWVDVFCDTGAFDAEQTRRVLAAGVAAGLGVRLHGNQIEQGPGVGVAVEFGAASVDHVNHLSDADVEALAGTWTGWDRASATGTPGTVAGCLPACDLSTRAPLAPARRLLDAGIEVSLASNCNPGTSYTTSMNFNVGTAVLQMHLTLAEAVRAATLGGALGLRAQDRVGSLEVGKRADLHVLDAPAAIHLAYRPGMPLTHAVWRAGRRAV

Annotated regions:
phrase: VLPGWVDSHTHLVFDGDRSAEFEARMAGESYAAGGIGVTTSATRAASDDRLAELVRGRVADAVAGGTTYLETKTGYGLTVEEEARHARLLAGLREEGLVDEVTFLGAHLVPPGRDAEDYLDDVVGPMLEAVREHAGWVDVFCDTGAFDAEQTRRVLAAGVAAGLGVRLHGNQIEQGPGVGVAVEFGAASVDHVNHLSDADVEALAGTWTGWDRASATGTPGTVAGCLPACDLSTRAPLAPARRLLDAGIEVSLASNCNPGTSYTTSMNFNVGTAVLQMHLTLAEAVRAATLGGALGLRAQDRVGSLEVGKRADLHVLD
type: DOMAIN
name: Amidohydro-rel
description: Amidohydrolase-related
Protein sequence:
MKFSRFKSRNTNYYTNTIITTETQLNNSNNNNFNNTTTINHFNKIHQQQSNNNNNNNNNNNNNNNNNNFINFSNHTNNINNNIDNRSDKKRKLNCMEKSNISSSSPYTLTSTPSSSSSSSSCESSLLNLNNEKLIEDKIISFSNENVGNIKIISMSDSKFTIYNSNNTDYKELLFWKVWRNFFLKNEILFHQRLYNLYSSFEFNDLKSLLNFQYREYLQHITFSFYFDEPLSLINFKNNNNYNNNNIFPNSVKKITFGYSFNQAINQNSFSPNSSSLTSLEFGESFNQDIQINSLPPSLTCLKFGKNFNCPLSLGVLPLSGNLKSISFGLSYNQPIQYIPNGVEKLKIGGNSVYNNKNNNVNNKNNNKINKYPNSIKIFKFDKYFNDEIMVGTIPNSVLKVKFGVQFNREISMEQIPCSVTEIDFGLKWNQPLNEFSLPKNGNLKSIIFSHFFNQQINANCLPDGLTHLKFGPLYSKEINLNHLPSSIEILMFHNSFQSLNLLKNYNNLNNKKIQIIYYN

Annotated regions:
phrase: FNQQINANCLPDGLTHLKFGPLYSKEINLNHLPSSIEILMFHN
type: REPEAT
name: FNIP
description: FNIP

phrase: FNCPLSLGVLPLSGNLKSISFGLSYNQPIQYIPNGVEKLKIG
type: REPEAT
name: FNIP
description: FNIP

phrase: SSLTSLEFGESFNQDIQINSLPPSLTCLKFG
type: REPEAT
name: FNIP
description: FNIP

phrase: PNSIKIFKFDKYFNDEIMVGTIPNSVLKVKF
type: REPEAT
name: FNIP
description: FNIP

phrase: FNREISMEQIPCSVTEIDFGLKWNQPLNEFSLPKNGNLKSIIF
type: REPEAT
name: FNIP
description: FNIP
Protein sequence:
MKHIVKHIHFVGIGGVGMSGIAEVLVNLGYQVSGSDLTSNAITDRLAALGARIAIGHAAENIEGANAVVVSTAVRSDNPEVLAARHRRIPIVPRAVMLAELMRLKQGIAIAGTHGKTTTTSLVASVLAAGGLDPTFVIGGRLISAGANARLGTGDFIVAEADESDASFLNLFPVIEVITNIDADHMDTYGHDFARLKQAFIEFTHRLPFYGIAVLCVDDPNVKEILPFVSKPIIRYGFAPDAQVRAVNVKAHDGKMHFTAMREDAAPIDIVLNLPGEHNVQNALAAIAIATELEVKDADIQRALADFNGVGRRFQRYGEVPVVSEGKASGAYTLVDDYGHHPVEMAATVAAARGAFPGRRLVLAFQPHRFTRTRDCFEDFVKVLSTVDALVLTEVYSAGESPIVAADGRALARALRVAGKVEPVFVDTVDEVPDALSAVVRDGDVVITMGAGSIGGVPGRLAQETKV

Annotated regions:
phrase: HIHFVGIGGVGMSGIAEVLVNLGYQVSGSDLTSNAITDRLAALGARIAIGHAAENIEGANAVVVSTAVRSDNPEVLAARHRRIPIVPRAVMLAELMRL
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: GAYTLVDDYGHHPVEMAATVAAARGAFPGRRLVLAFQPHRFTRTRDCFEDFVKVLSTVDALVLTEVYSAGESPIVAADGRALARALRVAGKVEPVFVDTVDEVPDALSAVVRDGDVVITMGA
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: IAGTHGKTTTTSLVASVLAAGGLDPTFVIGGRLISAGANARLGTGDFIVAEADESDASFLNLFPVIEVITNIDADHMDTYGHDFARLKQAFIEFTHRLPFYGIAVLCVDDPNVKEILPFVSKPIIRYGFAPDAQVRAVNVKAHDGKMHFTAMREDAAPIDIVLNLPGEHNVQNALAAIAI
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central
Protein sequence:
MYEYIRGQFQGISKDYVVIELNNIGYKIFTSGNTMSNMPKVGEEVLLYLEQIVREDFIGLYGFTTREELEMFKLLLSINGVGAKAALSLLSISTVNNLKYAIMMGDEKHITRAPGIGKKTAQRIILELKDKLKPDELTSEEGELIEGINDNSDYSFNINETLSALMALGYTEKEAQKALEKVDKTLSIENMIKESLKLLMR

Annotated regions:
phrase: KHITRAPGIGKKTAQRIIL
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: KLLLSINGVGAKAALSLLS
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: MYEYIRGQFQGISKDYVVIELNNIGYKIFTSGNTMSNMPKVGEEVLLYLEQIVREDFIGLY
type: DOMAIN
name: DNA_helicase_Holl-junc_RuvA_I
description: DNA helicase, Holliday junction RuvA type, domain I, bacterial

phrase: NINETLSALMALGYTEKEAQKALEKVDKTLSIENMIKESL
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal

phrase: INETLSALMALGYTEKEAQKALEKVDKTLSIENMIKESLKLL
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal
Protein sequence:
MVRTKSSSSSASSSSQKSPIKSNNGAGGGGSSSSHRQSHRTSIDERKSSSHAHSNNSNVSSSSRRAATATSGSSSPEGDDDTTTDDLTPTGSSPRSCNGRGHSSVHKQNLYVVSFPIIFLFNVLRSLIYQLFCIFRYLYGASTKVLYRPHRRDCNIEIVVQNSKEQQLQLQQHQHNQTLSYSLETGGVSGGSGGEQQVQVQPQRIRALQPLEMATNRPGGGYSPGPGDPLLAKQKHHHRRAFEYISKALKIDEENEGHKELAIELYRKGIKELEDGIAVDCWNGRGDVWDRAQRLHDKMQTNLSMARDRLHFLALREEDLQMQRLSLKEKQPAPKQPQRSQTKDPVKQPMLTSLNADPVKMKVRSSGYGPKQNGTSSSRPAPSGQTATGASGRKLTVGTKRPGNLPVTNKSQTLPRNLGSKTTVGAVQRQPAKTAATPPAVRRQFSSGRNTPPQRSRTPINNNASSGSGASTPMVSVKGVEQKLVQLILDEIVEGGAKVEWTDIAGQDVAKQALQEMVILPSVRPELFTGLRAPAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSNEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLPDEQTRELLLNRLLQKQGSPLDTEALRRLAKITEGYSGSDLTALAKDAALEPIRELNVEQVKCLDISAMRPITEKDFHNSLKRIRRSVAPQSLNSYEKWSQDYGDITI

Annotated regions:
phrase: LRRLAKITEGYSGSDLTALAKDAALEPIRE
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: LLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSNEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: QKHHHRRAFEYISKALKIDEENEGHKELAIELYRKGIKELEDGIAVDCWNGRGDVWDRAQRLHDKMQTNLSMARDRLH
type: DOMAIN
name: MIT_dom
description: MIT domain

phrase: PAKGLLLFGPPGNGKTLLARAVATECSATFLNISAASLTSKYVGDGEKLVRALFAVARHMQPSIIFIDEVDSLLSERSSNEHEASRRLKTEFLVEFDGLPGNPDGDRIVVLAATNRPQELDEAALRRFTKRVYVSLP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: IVVLAATNRPQELDEAALR
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: AMRPITEKDFHNSLKRIRRSVAPQSLNSYEKWSQDY
type: DOMAIN
name: Spast_Vps4_C
description: Spastin/Vps4, C-terminal