nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSKKQQNNNDNGKGNNFFNNNPLLVFVLFSVITIFAFKAIFPEGEMGSSSNSNIAAYGKTKNKTVAYSELKQLIANAQIEYVGIGNTQIKAVSKASSGEITTYTARRVIPDDTLIPLLEKSKIGYGGINEENLLADILFGWVLPIFIFFAIWMFLARRMSKSMGGGSGGILGIGSSKKMINSEKPKVKFDDMAGNKEAKEEVQEVVDFLSNPDRYVKLGAQIPKGVLLVGPPGTGKTLLAKAVAGEADVQFLSVSGSSFIEMFVGVGASRVRDLFEQAKKVAPAIIFIDEIDAIGKSRASGGPMGGNDEREQTLNQLLAEMDGFSTEAAPVIVLAATNRPEVLDPALLRPGRFDRQVLVDKPDFEGRVEILKVHIKDVKLAKDVDLEEVARMTAGLAGADLANIVNEAALLAGRASKEEVQACDFKESVERQIAGLEKKSRRISPKERKIVAYHESGHALIAEITKGAKKVNKVSIVPRGLAALGYTLNTPEENKYLMQKHELIAEVDTLLGGRAAEEVFIGEISTGAGNDLERATDIVKAMASMYGMSDIAGLMVLERRQNQFLGGQTHKDFSDEMAKNLDEHVKKVLNERYEVVKQALKDNNDAIEKMTAELLEIEVITGQRVREIIIENGGKVFEEEDLHSDAIKPEDKTTTPVETSEDNTTEEESLETNTNETSEVKEEKRD

Annotated regions:
phrase: LVFVLFSVITIFAFKAIFPEGEMGSSSNSNIAAYGKTKNKTVAYSELKQLIANAQIEYVGIGNTQIKAVSKASSGEITTYTARRVIPDDTLIPLLEKS
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular

phrase: IPKGVLLVGPPGTGKTLLAKAVAGEADVQFLSVSGSSFIEMFVGVGASRVRDLFEQAKKVAPAIIFIDEIDAIGKSRASGGPMGGNDEREQTLNQLLAEMDGFSTEAAPVIVLAATNRPEVLDPALLRPGRFDRQVLVDKP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VLLVGPPGTGKTLLAKAVAGEADVQFLSVSGSSFIEMFVGVGASRVRDLFEQAKKVAPAIIFIDEIDAIGKSRASGGPMGGNDEREQTLNQLLAEMDGFSTEAAPVIVLAATNRPEVLDPALLRPGRFDRQVLV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: DVDLEEVARMTAGLAGADLANIVNEAALLAGRASKEEVQACDFK
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: VIVLAATNRPEVLDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: RISPKERKIVAYHESGHALIAEITKGAKKVNKVSIVPRGLAALGYTLNTPEENKYLMQKHELIAEVDTLLGGRAAEEVFIGEISTGAGNDLERATDIVKAMASMYGMSDIAGLMVLERRQNQFLGGQTHKDFSDEMAKNLDEHVKKVLNERYEVVKQALKDNNDAIEKMTAELLEIEVITGQRVRE
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41
Protein sequence:
MEEKPKSTTPPPSVSSLRQKFEQFLDKTDKGFNATRNNYRGPVSSSTGIINDKEKKSHSYFKVREEGSNKRPSSFSASNPITPSSPQSTHSSPIYRGVGYHQYSSVNSGNSYSGSGNNINNIINNSNNSNSNNLYGNNSNNQSSGSLGNFLIDKLEYSAATVTASDLKRERQQLFRNKEEFTMESSSYGGSTIGDDDLDSLNGSSSQQFNHRNSSWADRRERFIKKVMNGQFNEVQMRDELNRLRDIEADKIRAEERRTPSMNMDEFKAIEIERLRKKIYQEELVIFRQEEIEKIQREERIKIEKEYDDKSIISSQERQHIVQQIINQKEDEKGSSPPFPIPLVVNNNNNENNENDNNNNNNNNNNNNNNNNNNNNNNNKNIDLTSFNNNININSNNNEIKNNVIVDSDDEEELERLEQLRRQREIERLREEEEENEDRVERELASRRRQEEDRIKREEEEEEEEQRNYLRRLKELERIKQIEEEEEEERERQSQLQSSQQQQKSSSTQRSSNTVTSTSSSSTGGDSNPSTSQKPTNLLNLMGSNNNISNINTNILSHSIVNSSGGLPPPPPTASHVDNRSRSHTLAGESHSSENTPLVSSIDNNGVNNKMSRSHSGGALSGLALPTAPPLPNQPNVNNSNNNNNNNNINNNHNHSHNHSNNLHQSALKNSSSMSTPSISPSQAGNSATSTVPSSPISASTSMSSPTLVVSPRKDELTTSTGSTRKGSISEREDKKKVSSSSTSSSSSSNGGLSSSGKDHKKDHSSEEKEKEKKSFFNKLFSKEKKDHHSSSKSPSSGSSGGGEVDEKKKKKLSPRVGTPFNVKHDVHVNFNADTGFEGLPKEWEVLIKSNFQEPEVMQHPEEVLDVVKFHAQYQGLASAPAMHAPSIPLTDEPPVTLNDLISLDDPKKIYYNINKIGEGGAGEVFEAINSRTNQTIAIKKMKLKAQNLKTVINEIGMMKNSNHENIVQYIDSYIVADELWVAMEFMSGGCLTEVLDQYRDIQLNESQIAFVCQEVLRGLEYIHKFNRIHRDIKSDNILIGANGEIKLADFGYAAQLTQIRQERNSVVGTPYWMAPELIRGNNYDFKVDVWSLGIMTREMAEGEPPYLEFPPLRALFLLTTQGLPPIRDAHKWSKEFNDFLALCLEKDTEKRASSSSLLHHPFLKRACSGPEFYKAVDAARIEKENQLQNFANLTAI

Annotated regions:
phrase: VGTPFNVKHDVHVNFNADTGFEGLPKEWEVLIKS
type: DOMAIN
name: CRIB_dom
description: CRIB domain

phrase: VGTPFNVKHDVHVNFNADTGFEGLPKEWEVLIKSNFQEPEVMQHPEEVLDVVKF
type: DOMAIN
name: CRIB_dom
description: CRIB domain

phrase: VGTPFNVKHDVHV
type: DOMAIN
name: CRIB_dom
description: CRIB domain

phrase: PRVGTPFNVKHDVHVNFNADTGFEGLPKEWEVLIKSNFQEPEV
type: DOMAIN
name: PAK_BD
description: p21 activated kinase binding domain

phrase: NINKIGEGGAGEVFEAINSRTNQTIAIKKMKLKAQNLKTVINEIGMMKNSNHENIVQYIDSYIVADELWVAMEFMSGGCLTEVLDQYRDIQLNESQIAFVCQEVLRGLEYIHKFNRIHRDIKSDNILIGANGEIKLADFGYAAQLTQIRQERNSVVGTPYWMAPELIRGNNYDFKVDVWSLGIMTREMAEGEPPYLEFPPLRALFLLTTQGLPPIRDAHKWSKEFNDFLALCLEKDTEKRASSSSLLHHPF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: YYNINKIGEGGAGEVFEAINSRTNQTIAIKKMKLKAQNLKTVINEIGMMKNSNHENIVQYIDSYIVADELWVAMEFMSGGCLTEVLDQYRDIQLNESQIAFVCQEVLRGLEYIHKFNRIHRDIKSDNILIGANGEIKLADFGYAAQLTQIRQERNSVVGTPYWMAPELIRGNNYDFKVDVWSLGIMTREMAEGEPPYLEFPPLRALFLLTTQGLPPIRDAHKWSKEFNDFLALCLEKDTEKRASSSSLLHHPF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: YYNINKIGEGGAGEVFEAINSRTNQTIAIKKMKLKAQNLKTVINEIGMMKNSNHENIVQYIDSYIVADELWVAMEFMSGGCLTEVLDQYRDIQLNESQIAFVCQEVLRGLEYIHKFNRIHRDIKSDNILIGANGEIKLADFGYAAQLTQIRQERNSVVGTPYWMAPELIRGNNYDFKVDVWSLGIMTREMAEGEPPYLEFPPLRALFLLTTQGLPPIRDAHKWSKEFNDFLALCLEKDTEKRASSSSLLHHPF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain
Protein sequence:
MSDTIAVEIKQLPHAEGLPLPAYQSAHAAGLDLCAANSADAPLLLAPGSYVLVPTGLTIALPENYEAQVRPRSGLAAKHGVTVLNAPGTIDADYRGEIGVLLINHGDAPFTIRRGERIAQMVIAPVVRAELIGVETLSETARGVGGFGSTGR

Annotated regions:
phrase: AGLDLCAANSADAPLLLAPGSYVLVPTGLTIALPENYEAQVRPRSGLAAKHGVTVLNAPGTIDADYRGEIGVLLINHGDAPFTIRRGERIAQMV
type: DOMAIN
name: dUTPase_trimeric
description: dUTPase, trimeric

phrase: PLPAYQSAHAAGLDLCAANSADAPLLLAPGSYVLVPTGLTIALPENYEAQVRPRSGLAAKHGVTVLNAPGTIDADYRGEIGVLLINHGDAPFTIRRGERIAQMVIAPVVRAELIGVETLSETARGVGGFGST
type: DOMAIN
name: dUTPase-like
description: dUTPase-like
Protein sequence:
MREALFSQDGWGCQHVNQDTNWEVPSSPEPANKDAPGPPMWKPSINNGTDLWESNLRNGGQPAAQQVPKPSWGHTPSSNLGGTWGEDDDGADSSSVWTGGAVSNAGSGAAVGVNQAGVNVGPGGVVSSGGPQWGQGVVGVGLGSTGGNGSSNITGSSGVATGSSGNSSNAGNGWGDPREIRPLGVGGSMDIRNVEHRGGNGSGATSSDPRDIRMIDPRDPIRGDPRGISGRLNGTSEMWGHHPQMSHNQLQGINKMVGQSVATASTSVGTSGSGIGPGGPGPSTVSGNIPTQWGPAQPVSVGVSGPKDMSKQISGWEEPSPPPQRRSIPNYDDGTSLWGQQTRVPAASGHWKDMTDSIGRSSHLMRGQSQTGGIGIAGVGNSNVPVGANPSNPISSVVGPQARIPSVGGVQHKPDGGAMWVHSGNVGGRNNVAAVTTWGDDTHSVNVGAPSSGSVSSNNWVDDKSNSTLAQNSWSDPAPVGVSWGNKQSKPPSNSASSGWSTAAGVVDGVDLGSEWNTHGGIIGKSQQQQKLAGLNVGMVNVINAEIIKQSKQYRILVENGFKKEDVERALVIANMNIEEAADMLRANSSLSMDGWRRHDESLGSYADHNSSTSSGGFAGRYPVNSGQPSMSFPHNNLMNNMGGTAVTGGNNNTNMTALQVQKYLNQGQHGVAVGPQAVGNSSAVSVGFGQNTSNAAVAGAASVNIAANTNNQPSGQQIRMLGQQIQLAIHSGFISSQILTQPLTQTTLNLLNQLLSNIKHLQAAQQSLTRGGNVNPMAVNVAISKYKQQIQNLQNQINAQQAVYVKQQNMQPTSQQQQPQQQQLPSVHLSNSGNDYLRGHDAINNLQSNFSELNINKPSGYQGASNQQSRLNQWKLPVLDKEINSDSTEFSRAPGATKQNLTANTSNINSLGLQNDSTWSTGRSIGDGWPDPSSDNENKDWSVAQPTSAATAYTDLVQEFEPGKPWKGSQIKSIEDDPSITPGSVARSPLSINSTPKDADIFANTGKNSPTDLPPLSLSSSTWSFNPNQNYPSHSWSDNSQQCTATSELWTSPLNKSSSRGPPPGLTANSNKSANSNASTPTTITGGANGWLQPRSGGVQTTNTNWTGGNTTWGSSWLLLKNLTAQIDGPTLRTLCMQHGPLVSFHPYLNQGIALCKYTTREEANKAQMALNNCVLANTTIFAESPSENEVQSIMQHLPQTPSSTSSSGTSGGNVGGVGTSANNANSGSAACLSGNNSGNGNGSASGAGSGNNGNSSCNNSAAGGGSSSNNTITTVANSNLVGSSGSVSNSSGVTANSSTVSVVSCTASGNSINGAGTANSSGSKSSANNLASGQSSASNLTNSTNSTWRQTSQNQALQSQSRPSGREADFDYISLVYSIVDD

Annotated regions:
phrase: ANPSNPISSVVGPQARIPSVGGVQHKPDGGAMWVHSGNVGGRNNVAAVTTWGDDTHSVNVGAPSSGSVSSNNWVDDKSNSTLAQNSWSDPAPVGVSWGNKQSKPPSNSASSGWSTAAGVVDGVDLGSEWNTHGGIIG
type: DOMAIN
name: Argonaute_hook_dom
description: Argonaute hook domain

phrase: IIKQSKQYRILVENGFKKEDVERALVIANMNIEEAADMLRA
type: DOMAIN
name: UBA
description: Ubiquitin-associated domain

phrase: SGGFAGRYPVNSGQPSMSFPHNNLMNNMGGTAVTGGNNNTNMTALQVQKYLNQGQHGVAVGPQAVGNSSAVSVGFGQNTSNAAVAGAASVNIAANTNNQPSGQQIRMLGQQIQLAIHSGFISSQILTQPLTQTTLNLLNQLLSNIKHLQAAQQSLTRGGNVNPMAVNVAISKYKQQIQNLQNQINAQQAVYVKQQNMQPTSQQQQPQQQQLPSVHLSNSGNDYLRGHDAINNLQ
type: DOMAIN
name: GW182_M_dom
description: GW182, middle domain

phrase: SSWLLLKNLTAQIDGPTLRTLCMQHGPLVSFHPYLNQGIALCKYTTREEANKAQMALNNCVLANTTIFA
type: DOMAIN
name: GW182_RRM
description: Gawky, RNA recognition motif

phrase: SKQYRILVENGFKKEDVERALVIANMNIEEAADM
type: DOMAIN
name: UBA
description: Ubiquitin-associated domain

phrase: SKQYRILVENGFKKEDVERALVIANMNIEEAADM
type: DOMAIN
name: Gawky_UBA
description: Gawky, UBA domain
Protein sequence:
MSMQDPIADMLTRIRNGQAANKVSVSMPSAKLKVAIAQTLKEEGYITDYTVAGEAKPVLEITLKYFQGQPVVETIQRVSRPGLRIYKGKNDLPKVMGGLGVAIVSTSKGLMTDRAARQQGMGGEVICYVA

Annotated regions:
phrase: GVAIVSTSKGLMTDRAA
type: CONSERVED_SITE
name: Ribosomal_uS8_CS
description: Small ribosomal subunit protein uS8, conserved site
Protein sequence:
MQLNSIKPAAGAKHAKRRVGRGIGSGLGKTAGRGHKGQKSRAGGYHKVGFEGGQMPLQRRLPKRGFKSQSLRFNAEVTLTTLDRLGLAEVDVLALKQAGLVGELIKVVKVIKSGALNRAVKLSGVGVTAGAKAAIEAAGGSVA

Annotated regions:
phrase: AEVDVLALKQAGLVGELIKVVKVIKSGALNRAVKLSGVGVTAGAKAAIEAAGGS
type: DOMAIN
name: Ribosomal_uL15/eL18
description: Large ribosomal subunit protein uL15/eL18
Protein sequence:
MFDFWVGPFYVGFFGVTTCLFASLGIALILLGTALGPTWNPLRINIAPPDLSYGLGFAPLMKGGLWQLITICAIGRFCCWALRQVEIARKLGMGLHIPFAFSFAIFAYLALVVIRPLLLGAWGHGXPYGILSHLDWVSNIGYQFLHFHYNPAHMIGITFFFTNCMAFGMHGSIILSVLNPGKGEKVKGSEHENTFFRDVVGYSIGTLGIHRLGVFLAISAAFWSAVCIILSGPFWTRGWPEWWNWWLQFPYSFVG

Annotated regions:
phrase: HFHYNPAHMIGITFFFTNCMAFGMHG
type: CONSERVED_SITE
name: Photo_RC_L/M_CS
description: Photosynthetic reaction centre, L/M, conserved site
Protein sequence:
MPNKKTIRDIDLKGKRVLVRVDFNVPIDNQGNIEDDARIRAAIPTIEYLLDAKAIVILMSHLGRPKGFDEKYSLKPVAKRLSRYIHKDVVMAPDCIGKDMENIVKNAKSEDVIMLENLRFHKEEEECDEEFSKKLASLGEVYVSDAFGTCHRKHASVYCVPQILKPACMGFLLEKELLYFEKAMVNPQRPVVAFLGGAKVSSKLNVIKNLLKRVDKMFIGGAMAFTFIKAMRYDTGKSLVENDLIDVAKDIIDISKKLGVKFYLPVDFIVGKELSDNTPIKTVLWQEIPQDYMGLDIGPVSISLAKELIGTAQTIVWNGPMGAFEYERFKDGTLEVARAIAHSQALSIAGGGDTDHAIIRAGVINAIDFVSTGGGAFLELLEGKELPCISVLDDK

Annotated regions:
phrase: RVLVRVDFNV
type: CONSERVED_SITE
name: Phosphoglycerate_kinase_CS
description: Phosphoglycerate kinase, conserved site
Protein sequence:
MICVSIGRGRHRHMIAEHKHLAENGMVLVELRLDYIQGGVQLKRLLADRPTPVIVTCRRAIDGGRWEQSEESRLLLLRAAIVEGADYIDLEDDIATKVPRYGRTKRIISHHDFHKTPSDLSALHRKLSAMDADIVKIATMANHPTDSLRMLELVRGSKVPTVGICMGDIGVPTRILAGRVGAPFTYATFHGDRVLAPGQIGWRQMRDVYRYDSITSATQIYGVVADPVAHSLSPIVHNGALAAAKIDAVYLPFRVPAEQIDEFLSDASRWPLSGLSVTIPHKETILRLVAQQDDLVKAIGAVNTLAFGPSRTGVVSSISGFNTDATAAIESLDAALLDHGQTSPEEVLNVKTALVLGAGGAARALAFGLRKRGIEVTVASRTLDRGKKIAAEVGCKAVDWQARYRMPHDCVVNATPVGMHPNVDETPFDKEHLRPYMVVFDTVYNPENTLLMKEARAIGCRLVTGVDMFVRQAATQFRIWHNQAAPEGVMRDSLKRATASAKNPE

Annotated regions:
phrase: GVDMFVRQAATQFRIWHNQAAPEGVMRDSL
type: DOMAIN
name: SDH_C
description: SDH, C-terminal

phrase: VVADPVAHSLSPIVHNGALAAAKIDAVYLPFRVPAEQIDEFLSDASRWPLSGLSVTIPHKETILRLVAQQDDLVKAIGAVNT
type: DOMAIN
name: Shikimate_DH-bd_N
description: Shikimate dehydrogenase substrate binding, N-terminal

phrase: VLGAGGAARALAFGLRKRGIEVTVASRTLDRGKKIAAEVGCKAVDWQARYRMPHDCVVNATPVGMHPNV
type: DOMAIN
name: P5C_Rdtase_cat_N
description: Pyrroline-5-carboxylate reductase, catalytic, N-terminal
Protein sequence:
MMKSNASPSESLSHHTPMMQQYLRLKAENPDILLFYRMGDFYELFYDDAKRASELLDISLTKRGASAGEPIPMAGVPFHAVEGYLAKLVQMGESVAICEQIGDPATSKGPVERKVVRIVTPGTVTDEALLSERVDNLIAAIYHHNGRFGYATMDITSGRFQLSEPQTEEEMAAELQRTSPRELLFPEDFSPVHLMASRQGNRRRPIWEFELDTAKQQLNQQFGTRDLVGFGVEQAKLGLCAAGCLIQYVKDTQRTALPHIRSLTWDRQDQSVILDAATRRNLELTHNLAGGTDNTLAEVLDHCATPMGSRMLKRWIHQPMRDNATLNQRLDAITELKETALYGELHPVLKQIGDIERILARLALRSARPRDLARLRHAMQQLPELHSVMSELKQPHLTELRTHAEPMDELCDLLERAIKENPPVVIRDGGVIADGYSAELDEWRDLANGATEFLERLEAEERDRHGIDTLKVGYNNVHGFYIQVSRGQSHLVPPHYVRRQTLKNAERYIIEELKQHEDKVLNSKSRALALEKQLWEELFDLLMPHLEQLQQLAASVAQLDVLQNLAERAENLEYCRPTLVQEAGIHIQGGRHPVVERVMNEPFIANPIELNPQRRMLIITGPNMGGKSTYMRQTALIALMAHIGSYVPAESASIGPLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATRNSLVLMDEIGRGTSTYDGLSLAWASAEWLAKEIGAMTLFATHYFELTELPNVLPHLANVHLDAVEHGDGIAFMHAVQEGAASKSYGLAVAGLAGVPKPVIKNARAKLQQLELLSSQPAETRKPSRVDIANQLSLIPEPSAVEQALAGVDPDQLTPRQALDMLYQLKKLL

Annotated regions:
phrase: TPMMQQYLRLKAENPDILLFYRMGDFYELFYDDAKRASELLDISLTKRGASAGEPIPMAGVPFHAVEGYLAKLVQMGESVAICEQIGDPATSKGPVERKVVRIVTPGTVTD
type: DOMAIN
name: DNA_mismatch_repair_MutS-lik_N
description: DNA mismatch repair protein MutS-like, N-terminal

phrase: RRMLIITGPNMGGKSTYMRQTALIALMAHIGSYVPAESASIGPLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATRNSLVLMDEIGRGTSTYDGLSLAWASAEWLAKEIGAMTLFATHYFELTELPNVLPHLANVHLDAVEHGDGIAFMHAVQEGAASKSYGLAVAGLAGVPKPVIKNARAKL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: SLVLMDEIGRGTSTYD
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: GYSAELDEWRDLANGATEFLERLEAEERDRHGIDTLKVGYNNVHGFYIQVSRGQSHLVPPHYVRRQTLKNAERYIIEELKQHEDKVLNSK
type: DOMAIN
name: DNA_mismatch_repair_MutS_clamp
description: DNA mismatch repair protein MutS, clamp

phrase: GTDNTLAEVLDHCATPMGSRMLKRWIHQPMRDNATLNQRLDAITELKETALYGELHPVLKQIGDIERILARLALRSARPRDLARLRHAMQQLPELHSVMSELKQPHLTELRTHAEPMDELCDLLERAIKENPPVVIRDGGVIADGYSAELDEWRDLANGATEFLERLEAEERDRHGIDTLKVGYNNVHGFYIQVSRGQSHLVPPHYVRRQTLKNAERYIIEELKQHEDKVLNSKSRALALEKQLWEELFDLLMPHLEQLQQLAASVAQLDVLQNLAERAENLEYCRPTLVQEAGIHIQGGRHPVVER
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: LIITGPNMGGKSTYMRQTALIALMAHIGSYVPAESASIGPLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATRNSLVLMDEIGRGTSTYDGLSLAWASAEWLAKEIGAMTLFATHYFELTELPNVLPHLANVHLDAVEHGDGIAFMHAVQEGAASKSYGLAVAGLAGVPKPVIKNARAKLQQL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: ATRRNLELTHNLAGGTDNTLAEVLDHCATPMGSRMLKRWIHQPMRDNATLNQRLDAITELKETALYGELHPVLKQIGDIERILARLALRSARPRDLARLRHAMQQLPELHSVMSELKQPHLTELRTHAEPMDELCDLLERAIKENPPVVIRDGGVIADGYSAELDEWRDLANGATEFLERLEAEERDRHGIDTLKVGYNNVHGFYIQVSRGQSHLVPPHYVRRQTLKNAERYIIEELKQHEDKVLNSKSRALALEKQLWEELFDLLMPHLEQLQQLAASVAQLDVLQNL
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: NLIAAIYHHNGRFGYATMDITSGRFQLSEPQTEEEMAAELQRTSPRELLFPEDFSPVHLMASRQGNRRRPIWEFELDTAKQQLNQQFGTRDLVGFGVEQAKLGLCAAGCLIQYVKDTQRTALPHI
type: DOMAIN
name: DNA_mmatch_repair_MutS_con_dom
description: DNA mismatch repair protein MutS, connector domain
Protein sequence:
MRHLISMRDIGREEILNILDESERMEAILNEKGHCDFLNGRILATLFYEPSTRTRLSFETAMKRLGGNVIGFTDISNTSVTKGESLADTIKVISGYSDLIAIRHPSEGAARLSSENSKVPVINAGDGSNQHPTQTLLDLYTIKREVGHIENLKIAFIGDLKYGRTVHSLCQALSLFKGVEIKLISPDELKMPREVIEDIAGKIKLSEMADVDIDDVDVVYMTRIQKERFVDVNEYYKVKGIYRLSKEHIGEKNVVIMHPLPRVDEIDSEVDNIPQARYFKQSFYGVPVRMAILKLLFEDSVK

Annotated regions:
phrase: NLKIAFIGDLKYGRTVHSLCQALSLFKGVEIKLISPDELKMPREVIEDIAGKIKLSEMADVDIDDVDVVYMTRIQKERFVDVNEYYKVKGIYRLSKEHIGEKNVVIMHPLPRVDEIDSEVDNIPQARYFKQSFYGVPVRMAILK
type: DOMAIN
name: Asp_carbamoyltransf_Asp/Orn-bd
description: Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain

phrase: RHLISMRDIGREEILNILDESERMEAILNEKGHCDFLNGRILATLFYEPSTRTRLSFETAMKRLGGNVIGFTDISNTSVTKGESLADTIKVISGYSDLIAIRHPSEGAARLSSENSKVPVINAGDGSNQHPTQTLLDLYTI
type: DOMAIN
name: Asp/Orn_carbamoyltranf_P-bd
description: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding
Protein sequence:
MDVDKLTLKVQQAINDCQTIAVRYNHQQIDTIHLFMAIISQEDGLIPNILGKMGADVETVKRDTEAELDRMPKVLGEGAQNASIYATRRFEEVFVRGEKISRDFKDLYISVEHVMLALMDIDSGAIKSILDKNNISKKEFLKALREVRGNQRVDTSDPEGTYDALNKYGRDLVKDAKKHKLDPVIGRDEEIRRVIRILSRRTKNNPVLIGEPGVGKTAIVEGLAERIVRGDVPEGLKNKIIFSLDMGSLVAGAKYRGEFEERLKAVLKEVERSEGKIILFIDEIHTIVGAGKTEGAMDAGNIIKPMLARGELHCIGATTFDEYRKYIEKDKALERRFQKVQIDEPTVDDAISILRGLKERFEIHHGVRIHDNAIVAAAKLSDRYITGRFLPDKAIDLIDEAGAMVRMEIDSMPTELDMLKRKIFQMEIEKEALSKESDKFSRERLESIQKELSDLKDKDKAMTAKYDKEKAQIQGIKELKTKLDEIRGQIEKAEREYDLNKAAELKYGEVPKLEHEIEEKENLIKQNGQNAMLKEEVTEEQVSNIVSKWTGIPVSKLVEGERNKLMRLSDELEKRVVGQTEAVKSVADAVIRARAGLKDMSKPIGSFIFLGPTGVGKTELAKTLARVMFDSEDNIIRIDMSEYMEKYSVSRLIGSPPGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHSDVFNIFLQIFDDGRLTDNKGNTIDFKNSIIIMTSNIGSEHLLNNKGVSNVDEETKDKVMNELKGRFKPEFLNRLDDIIMFKPLSINEIGKIIDIFLENIKSKLKEKNIKIDIAEEAKKIIAEEGYDPVYGARPLKRYIENTIETHIAKMFISGEISEGDILKIEGSDSKLTIVKK

Annotated regions:
phrase: VDDAISILRGLKERFEIHHGVRIHDNAIVAAAKLSDRYITGRFLPDKAIDLIDEAGAMVRMEIDSMPTELDMLKRKIFQMEIEKEALSKESDKFSRERLES
type: DOMAIN
name: ClpA/ClpB_AAA_lid
description: ClpA/ClpB, AAA lid domain

phrase: EKISRDFKDLYISVEHVMLALMDIDSGAIKSILDKNNISKKEFLKALREVR
type: DOMAIN
name: Clp_R_dom
description: Clp, repeat (R) domain

phrase: CQTIAVRYNHQQIDTIHLFMAIISQEDGLIPNILGKMGADVETVKRDTEAE
type: DOMAIN
name: Clp_R_dom
description: Clp, repeat (R) domain

phrase: TKNNPVLIGEPGVGKTAIVEGLAERIVRGDVPEGLKNKIIFSLDMGSLVAGAKYRGEFEERLKAVLKEVERSEGKIILFIDEIHTIVGAGKTEGAMDAGNIIKPMLARGELHCIGATTFDEYRKYIEKDKALERRFQKVQIDEPTV
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: PIGSFIFLGPTGVGKTELAKTLARVMFDSEDNIIRIDMSEYMEKYSVSRLIGSPPGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHSDVFNIFLQIFDDGRLTDNKGNTIDFKNSIIIMTSNIGSEHLLNNKGVSNVDEETKDKVMNELKGRFKPEFLNRLDDIIMFKPL
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: RIDMSEYMEKYSVSRLIG
type: CONSERVED_SITE
name: ClpA/B_CS2
description: ClpA/B, conserved site 2

phrase: VDKLTLKVQQAINDCQTIAVRYNHQQIDTIHLFMAIISQEDGLIPNILGKMGADVETVKRDTEAELDRMPKVLGEGAQNASIYATRRFEEVFVRGEKISRDFKDLYISVEHVMLALMDIDSGAIKSILDKNNISKKEFLKALREVRG
type: DOMAIN
name: Clp_R_dom
description: Clp, repeat (R) domain

phrase: DAGNIIKPMLAR
type: CONSERVED_SITE
name: ClpA/B_CS1
description: ClpA/B, conserved site 1

phrase: LSINEIGKIIDIFLENIKSKLKEKNIKIDIAEEAKKIIAEEGYDPVYGARPLKRYIENTIETHIAKMFISGEISEGDILKIEGSDSKLT
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal

phrase: LSINEIGKIIDIFLENIKSKLKEKNIKIDIAEEAKKIIAEEGYDPVYGARPLKRYIENTIETHIAKMFISGEISEGDIL
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal

phrase: KPIGSFIFLGPTGVGKTELAKTLARVMFDSEDNIIRIDMSEYMEKYSVSRLIGSPPGYVGYEEGGQLTEAVRRKPYSVILFDEIEKAHSDVFNIFLQIFDDGRLTDNKGNTIDFKNSIIIMTSNIGSEHLLNNKGVSNVDEETKDKVMNELKGRFKPEFLNRLDD
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: VLIGEPGVGKTAIVEGLAERIVRGDVPEGLKNKIIFSLDMGSLVAGAKYRGEFEERLKAVLKEVERSEGKIILFIDEIHTIVGAGKTEGAMDAGNIIKPMLARGELHCIGAT
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core
Protein sequence:
MKSLEEAQKFLEDHHVKYVLAQFVDIHGVAKVKSVPASHLNDILTTGAGFAGGAIWGTGIAPNGPDYMAIGELSTLSLIPWQPGYARLVCDGHVNGKPYEFDTRVVLKQQIARLAEKGWTLYTGLEPEFSLLKKDEHGAVHPFDDSDTLQKPCYDYKGITRHSPFLEKLTESLVEVGLDIYQIDHEDANGQFEINYTYADCLKSADDYIMFKMAASEIANELGIICSFMPKPFSNRPGNGMHMHMSIGDGKKSLFQDDSDPSGLGLSKLAYHFLGGILAHAPALAAVCAPTVNSYKRLVVGRSLSGATWAPAYIAYGNNNRSTLVRIPYGRLELRLPDGSCNPYLATAAVIAAGLDGVARELDPGTGRDDNLYDYSLEQLAEFGIGILPQNLGEALDALEADQVIMDAMGPGLSKEFVELKRMEWVDYMRHVSDWEINRYVQFY

Annotated regions:
phrase: KPFSNRPGNGMHMHM
type: CONSERVED_SITE
name: Gln_synth_gly_rich_site
description: Glutamine synthetase, glycine-rich site

phrase: FDTRVVLKQQIARLAEKGWTLYTGLEPEFSLLKKDEHGAVHPFDDSDTLQKPCYDYKGITRHSPFLEKLTESLVEVGLDIYQIDHEDANGQFEINYTYADCLKSADDYIMFKMAASEIANELGIICSFMPKPFSNRPGNGMHMHMSIGDGKKSLFQDDSDPSGLGLSKLAYHFLGGILAHAPALAAVCAPTVNSYKRLVVGRSLSGATWAPAYIAYGNNNRSTLVRIPYGRLELRLPDGSCNPYLATAAVIAAGLDGVARELDPGTGRDDNLYDYSLEQLAEFGIGILPQNLGEALDALEADQVIMDAMGPGLSKEFVELKRMEWVDYMRHVSDWEINR
type: DOMAIN
name: Gln_synth_cat_dom
description: Glutamine synthetase, catalytic domain

phrase: TRVVLKQQIARLAEKGWTLYTGLEPEFSLLKKDEHGAVHPFDDSDTLQKPCYDYKGITRHSPFLEKLTESLVEVGLDIYQIDHEDANGQFEINYTYADCLKSADDYIMFKMAASEIANELGIICSFMPKPFSNRPGNGMHMHMSIGDGKKSLFQDDSDPSGLGLSKLAYHFLGGILAHAPALAAVCAPTVNSYKRLVVGRSLSGATWAPAYIAYGNNNRSTLVRIPYGRLELRLPDGSCNPYLATAAVIAAGLDGVARELDPGTGRDDNLYDYSLEQLAEFGIGILPQNLGEALDALEADQVIMDAMGPGLSKEFVELKRMEWVDYMRHVSDWEINRYVQF
type: DOMAIN
name: Gln_synth_cat_dom
description: Glutamine synthetase, catalytic domain

phrase: EFDTRVVLKQQIARLAEKGWTLYTGLEPEFSLLKKDEHGAVHPFDDSDTLQKPCYDYKGITRHSPFLEKLTESLVEVGLDIYQIDHEDANGQFEINYTYADCLKSADDYIMFKMAASEIANELGIICSFMPKPFSNRPGNGMHMHMSIGDGKKSLFQDDSDPSGLGLSKLAYHFLGGILAHAPALAAVCAPTVNSYKRLVVGRSLSGATWAPAYIAYGNNNRSTLVRIPYGRLELRLPDGSCNPYLATAAVIAA
type: DOMAIN
name: Gln_synth_cat_dom
description: Glutamine synthetase, catalytic domain

phrase: HHVKYVLAQFVDIHGVAKVKSVPASHLNDILTTGAGFAGGAIWGTGIAPNGPDYMAIGELSTLSLIPWQPGYARLVCDGHVNG
type: DOMAIN
name: Gln_synt_N
description: Glutamine synthetase, N-terminal domain
Protein sequence:
MKIGIIGAMEPEVAHLVESMENPSSTTIAGIEFVAGQLAGKDVVVTRSGIGKVTASIATTLLIEKYAPDAIINTGSAGGFADELAIGDIVISSEVRHHDVDVTAFGYEIGQMAQQPAAFIPDTALVTAAQKAVASLGEVKAIEGLICTGDSFICDPVRTKTMLEHFPTMAACEMEGAAIAQVCHQFDVPFVVIRSLSDNANNDSPVDFDEYLVKAGHHSALMVIALLEQL

Annotated regions:
phrase: KIGIIGAMEPEVAHLVESMENPSSTTIAGIEFVAGQLAGKDVVVTRSGIGKVTASIATTLLIEKYAPDAIINTGSAGGFADELAIGDIVISSEVRHHDVDVTAFGYEIGQMAQQPAAFIPDTALVTAAQKAVASLGEVKAIEGLICTGDSFICDPVRTKTMLEHFPTMAACEMEGAAIAQVCHQFDVPFVVIRSLSDNANNDSPVDFDEYLVKAGHHSALMVI
type: DOMAIN
name: Nucleoside_phosphorylase_d
description: Nucleoside phosphorylase domain
Protein sequence:
MEKLGLNELRERFLKFFESKGHLRLPSFSLIPQNDPSLLLINSGMAPLKPYFTGQEEPPRRRVTTCQKCIRTPDIENVGKTARHGTFFEMLGNFSFGDYFKNEAIPWAWEFFTEDLKIPVERLWVSIYEDDDEAFEIWNKKVGLPPERIVRMGKDNNFWEHGTGPCGPCSEIYFDRGEDKGCGKPDCKVGCDCDRFIEVWNLVFTQFNKEEDGSYSRLKNPNIDTGMGLERLACVMQDVNNLFEVDTIRRVLDYICKITGVEYGSSEKTDVSIRVITDHIRSTTMMISDGVIPSNEGRGYVLRRLLRRAARHGKLLGMDRPFLSDVASVVIKESKGAYPELAERAENIKKVIRIEEEKFEETIDQGLVILSKYIEETRKKGEKVISGDVVFELHGTYGFPVDLTREIAEENGLGVDEEGFREKMKEHQNLAREDYQSKQGSAWGDDIYSKLDKSVKTEFLGYTESEATARVLYIIKEDQVVDEAQKGDSVTVILDRTPFYAESGGQVGDKGLIEAEGARVKVLDCKKTNDGKYLHIGEIEEGTLRNGMEVKATIDKKRRMAIARNHTTTHLLHKALRNVLGSHVNQAGSLVEPDRLRFDFTHFSAMTPEEIKSVEDQVNEKILESIAVDIREMSIDEARKMGATALFGEKYGDVVRVVKIGDYSIELCGGTHLNVTSQAGFIKIVSESGVASGVRRIEALTGEAALKHFDEEEKLLRDIAQVLKTNPSDSVKRIESLLNEIKAAQKEIEQLRSKLVSSSLDDVLAKAVEINGVKVVTARFDQFDMEALRNTGDTIRNKLGSGVVVLGTGFGGKVSLVVMATKDVVAKGIHAGNIIKEAAKVAGGGGGGRPDMAQAGGKDVSKIDEALKQAVKVIESQLAG

Annotated regions:
phrase: ELRERFLKFFESKGHLRLPSFSLIPQNDPSLLLINSGMAPLKPYFTGQEEPPRRRVTTCQKCIRTPDIENVGKTARHGTFFEMLGNFSFGDYFKNEAIPWAWEFFTEDLKIPVERLWVSIYEDDDEAFEIWNKKVGLPPERIVRMGKDNNFWEHGTGPCGPCSEIYFDRGEDKGCGKPDCKVGCDCDRFIEVWNLVFTQFNKEEDGSYSRLKNPNIDTGMGLERLACVMQDVNNLFEVDTIRRVLDYICKITGVEYGSSEKTDVSIRVITDHIRSTTMMISDGVIPSNEGRGYVLRRLLRRAARHGKLLGMDRPFLSDVASVVIKESKGAYPELAERAENIKKVIRIEEEKFEETIDQGLVILSKYIEETRKKGEKVISGDVVFELHGTYGFPVDLTREIAEENGLGVDEEGFREKMKEHQNLAREDYQSKQGSAWGDDIYSKLDKSVKTEFLGYTESEATARVLYIIKEDQVVDEAQKGDSVTVILDRTPFYAESGGQVGDKGLIEAEGARVKVLDCKKTNDGKYLHIGEIEEGTLRNGMEVKATIDKK
type: DOMAIN
name: Ala-tRNA-synth_IIc_N
description: Alanyl-tRNA synthetase, class IIc, N-terminal

phrase: VKVVTARFDQFDMEALRNTGDTIRNKLGSGVVVLGTGFGGKVSLVVMATKDVVAKGIHAGNIIKEAAKVAGGGGGGRPDMAQAGGKDVSKIDEALKQAVKVI
type: DOMAIN
name: DHHA1_dom
description: DHHA1 domain

phrase: VRVVKIGDYSIELCGGTHLNVTSQAGFIKIVSESGVASGVRRI
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD

phrase: LGLNELRERFLKFFESKGHLRLPSFSLIPQNDPSLLLINSGMAPLKPYFTGQEEPPRRRVTTCQKCIRTPDIENVGKTARHGTFFEMLGNFSFGDYFKNEAIPWAWEFFTEDLKIPVERLWVSIYEDDDEAFEIWNKKVGLPPERIVRMGKDNNFWEHGTGPCGPCSEIYFDRGEDKGCGKPDCKVGCDCDRFIEVWNLVFTQFNKEEDGSYSRLKNPNIDTGMGLERLACVMQDVNNLFEVDTIRRVLDYICKITGVEYGSSEKTDVSIRVITDHIRSTTMMISDGVIPSNEGRGYVLRRLLRRAARHGKLLGMDRPFLSDVASVVIKESKGAYPELAERAENIKKVIRIEEEKFEETIDQGLVILSKYIEETRKKGEKVISGDVVFELHGTYGFPVDLTREIAEENGLGVDEEGFREKMKEHQNLAREDYQSKQGSAWGDDIYSKLDKSVKTEFLGYTESEATARVLYIIKEDQVVDEAQKGDSVTVILDRTPFYAESGGQVGDKGLIEAEGARVKVLDCKKTNDGKYLHIGEIEEGTLRNGMEVKATIDKKRRMAIARNHTTTHLLHKALRNVLGSHVNQAGSLVEPDRLRFDFTHFSAMTPEEIKSVEDQVNEKILESIAVDIREMSIDEARKMGATALFGEKYGDVVRVVKIGDYSIELCGGTHLNVTSQAGFIKIVSESGVASGVRRIEALTGEAALKHFD
type: DOMAIN
name: Ala-tRNA-synth_IIc_core
description: Alanyl-tRNA synthetase, class IIc, core domain

phrase: VRVVKIGDYSIELCGGTHLNVTSQAGFIKIVSESGVASGVRRI
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD
Protein sequence:
MGYRVAIVGATGEVGRTFLKVLEERNFPVDELILFASERSEGSKLTFKGEEHEVRALNKQPNFKGIDIALFSAGGSISKEFAPKFAEDGAVVVDNSSAWRMDPDVPLVVPEVNPQDVHMFDKKRIIANPNCSTIQMVVALKPIYDEAGINRVVVATYQSVSGAGAKAIRELEEQTRAWCEGRPIPEPKHIAKQIAFNAVPHIDVFMDSDYTKEELKMLNETRKIMHDDNIKVSATAVRVPVFYSHSEAVHIETKRAISPERARELLSRAPGVVVVDDPHGGAYPTAIDAAGRDEVFVGRVREDIAFTPGLAMWVVADNIRKGAATNAVQIAELLVKEGLV

Annotated regions:
phrase: RVAIVGATGEVGRTFLKVLEERNFPVDELILFASERSEGSKLTFKGEEHEVRALNKQPNFKGIDIALFSAGGSISKEFAPKFAEDGAVVVDNSSAWRMDPDVPLVVPEVNPQDVHM
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: LKPIYDEAGINRVVVATYQSVSGAGAKAIRELEEQTRAWCEGRPIPEPKHIAKQIAFNAVPHIDVFMDSDYTKEELKMLNETRKIMHDDNIKVSATAVRVPVFYSHSEAVHIETKRAISPERARELLSRAPGVVVVDDPHGGAYPTAIDAAGRDEVFVGRVREDIAFTPGLAMWVVADNIR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: RVAIVGATGEVGRTFLKVLEERNFPVDELILFASERSEGSKLTFKGEEHEVRALNKQPNFKGIDIALFSAGGSISKEFAPKFAEDGAVVVDNSSAWRMDPDVPLVVPEVNPQDV
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MPLSNAQLAQTIDHTLLAPDASDAQIRELCRQAAEHRFYSVCVNSANVPLAARELADTGVLVCAVVGFPLGAGLSAAKAFEATVAIAAGAGEIDMVINIGALKSGRADDVKADIDAVHRACGAVPLKVILETGLLTDDEKVRVCEMCRDLGVAFVKTSTGFGHGGATLADVALMRRTVGPVLGVKASGGVRDRAAALAMIEAGATRLGTSSGVAIVTDQDGSASAY

Annotated regions:
Protein sequence:
MPADTRPAAIVLMGPTASGKSQLAIDIAKRWGGEVISVDSVLVYRGLDIGTAKPNAAMRASVPHHLIDICEPWETYSAADFAHDARAAIDMIVRRGALPILTGGTGLYFRALLAGLSDMPPAHPEIRAMIAAEAKRDSWATLHTRLAEVDAITAARIHATDPQRIQRALEVYLVSGRSMSDWQNQPPKQRLPLRVLKLVLAPTHRKVLHFRIAQRFKAMLDNGLLAEVNALRTHPSIHAMARPLDLPAMRAVGYRQCWEHLDGMYTAEMLYQRSVAATRQLAKRQLTWLRGELDALWFDPEHDQSRIEKVMEAFLNR

Annotated regions: