nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MDYINLNYRPNEGDLLSCMVIKGENLEKLANEIAGESSIGTWTKVQTMKSDIYEKLRPKVYEIKEIGEENGYKVGLIKIAYPLYDFEINNMPGVLAGIAGNIFGMKIAKGLRILDFRFPAEFVKAYKGPRFGIEGVRETLKIKERPLLGTIVKPKVGLKTEEHAKVAYEAWVGGVDLVKDDENLTSQEFNKFEDRIYKTLEMRDKAEEETGERKAYMPNITAPYREMIRRAEIAEDAGSEYVMIDVVVCGFSAVQSFREEDFKFIIHAHRAMHAAMTRSRDFGISMLALAKIYRLLGVDQLHIGTVVGKMEGGEKEVKAIRDEIVYDKVEADNENKFFNQDWFDIKPVFPVSSGGVHPRLVPKIVEILGRDLIIQAGGGVHGHPDGTRAGAKAMRAAIEAIIEGKSLEEKAEEVAELKKALEYWK

Annotated regions:
phrase: GIEGVRETLKIKERPLLGTIVKPKVGLKTEEHAKVAYEAWVGGVDLVKDDENLTSQEFNKFEDRIYKTLEMRDKAEEETGERKAYMPNITAPYREMIRRAEIAEDAGSEYVMIDVVVCGFSAVQSFREEDFKFIIHAHRAMHAAMTRSRDFGISMLALAKIYRLLGVDQLHIGTVVGKMEGGEKEVKAIRDEIVYDKVEADNENKFFNQDWFDIKPVFPVSSGGVHPRLVPKIVEILGRDLIIQAGGGVHGHPDGTRAGAKAMRAAIEAIIEGKSLEEKAEEVAELKKALEY
type: DOMAIN
name: RuBisCO_lsu_C
description: Ribulose bisphosphate carboxylase, large subunit, C-terminal

phrase: DYINLNYRPNEGDLLSCMVIKGENLEKLANEIAGESSIGTWTKVQTMKSDIYEKLRPKVYEIKEIGEENGYKVGLIKIAYPLYDFEINNMPGVLAGIAGNIFGMKIAKGLRILDFRFPAE
type: DOMAIN
name: RuBisCO_lsu_fd_N
description: Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal
Protein sequence:
MIYQGENLSVRYIADGIAELTFDAKQGSVNKLDKSTLVSLDEAISALQQQTELKGLLLSSAKDAFIVGADITEFLGLFALPEEELGAWLTKANDIFNALEDLPVPTVSAINGYALGGGCEFILSTDLRIAEPSARIGLPETQLGIMPGFGGTVRLPRVIGADNAMEWITTGKNYKAAEAQKFGMVDAVVPAERLHDAALAMLQDAINEKIDWQNRRKAKLSPLALNKIEAMMSFNCAKGMVIAKAGPHYPAPITAVKTMEKAAACGREEALALEGKYFIGLAKSDVAQALVGIFLNDQQLKGLAKKAAKNAQAINQAAVLGAGIMGGGIAYQSASRGVPAVMKDINQAALELGMNEATKLLNKQLERGRIDGLKMGKILSAINPSLNYESIANSDIVVEAVVENPKIKAAVLQEVEQKVSADTIVASNTSTIPISLLAKNLARPEKFCGMHFFNPVHRMPLVEVIRGENTSQETIDSVVAYAAKMGKTPVVVNDCPGFFVNRVLFPYFFGFTRLLQDGADFVKVDKIMEKQFGWPMGPAYLLDVVGIDTGHHAGAVMANGFPERMSKTGEDAIDVMYQAERFGQKNGLGFYAYTKDRRGKPKKDADPASYDLLTKICKERYDYSSEQIIARMMIPMINEVVRCLEEGIIQSPAEADMALVYGLGFPPFRGGVFRYLDTMGLDNYVALADQYAELGPLYQVTDGLRAKAAAGETYYGKQG

Annotated regions:
phrase: AAVLGAGIMGGGIAYQSASRGVPAVMKDINQAALELGMNEATKLLNKQLERGRIDGLKMGKILSAINPSLNYESIANSDIVVEAVVENPKIKAAVLQEVEQKVSADTIVASNTSTIPISLLAKNLARPEKFCGMHFFNPVHRMPLVEVIRGENTSQETIDSVVAYAAKMGKTPVVVND
type: DOMAIN
name: 3-OHacyl-CoA_DH_NAD-bd
description: 3-hydroxyacyl-CoA dehydrogenase, NAD binding

phrase: GFFVNRVLFPYFFGFTRLLQDGADFVKVDKIMEKQFGWPMGPAYLLDVVGIDTGHHAGAVMANGFPERMSKTGEDAIDVMYQAERFGQKNGLGFYA
type: DOMAIN
name: 3HC_DH_C
description: 3-hydroxyacyl-CoA dehydrogenase, C-terminal

phrase: IIARMMIPMINEVVRCLEEGIIQSPAEADMALVYGLGFPPFRGGVFRYLDTMGLDNYVALADQYA
type: DOMAIN
name: 3HC_DH_C
description: 3-hydroxyacyl-CoA dehydrogenase, C-terminal

phrase: VSAINGYALGGGCEFILSTD
type: CONSERVED_SITE
name: Enoyl-CoA_hyd/isom_CS
description: Enoyl-CoA hydratase/isomerase, conserved site

phrase: DCPGFFVNRVLFPYFFGFTRLLQD
type: CONSERVED_SITE
name: 3-OHacyl-CoA_DH_CS
description: 3-hydroxyacyl-CoA dehydrogenase, conserved site
Protein sequence:
MGSTSGIGLIPNNRTARNLLQLLNHPTIEKRLINKDYEAVGMIPVGTANMVMKTKKISKVAQLRGQRIGVLANNPPQQALVRSVGAQPVYVDLSNAIAQFQQNKIDIMPAPVYGLLPYNLQKDFGPDTQVINFPLAYFGVNIIIKPQAYPANFGRKIRAWFVQNSQLLTNRAIQWENHLPAYYWVDVSFYEKQSYDIMVAKIRNQYVRSGYYDAYFVELMKRLRCIDDPRYFECPMSR

Annotated regions:
Protein sequence:
MNYTGYLLAFQLCIILGSSSCYCQADLFKEKYKLRNIFNASDSDVADGGLFLDILKNWKEESDKKIIQSQIVSVYFKIFDNLKDNQIIQKSMATIKEDLIAKFFNSSSSKLNDFPQKLIRTPVNDLKVQRKAVNELFKVMNXDLSPKSNLRKRKRSQSTFHGRRASI

Annotated regions:
Protein sequence:
MSITFQELYPVENIAGWMKQPFNGFVLDSRKVQQGQIFIALDSFSQPEKTIQFARIALEKGAIAVVSESQLEIENSIQVATVRHLMGTWQKQYLKATTQVELPQILAVTGTNGKTTISRLVAELLMLQGQACAVMGTTGNGILPNLEASSHTTLDALHLQNALHEYAVQGAKFASIEASSHGLEQGRLAGCDIEIAAYSNLSRDHLDYHGTLEAYAEAKSRLFKFESLKVAIINIDDAHAHVMIDAAKCNPAQPQILTYSTTQKADYQVQDIQYSLSGVHFRLITKNGDFTVHSPLLGHFNIENLVASLIMAEQAGFDLEQLIDIAPQLKGAPGRMQVIRDGERLFVVDYAHTPDALIQVLTTLKRHVSQDLWAVFGCGGDRDRGKRPLMTQAALDYSDIVLLTSDNPRTENPEQIFADMKAGIHFDGKNVHEIHDRREAIKFAVQQAKSGDIVVIAGKGHENYQEIDGVRHWFDDVVEVQAAIDAQHHDLDSAYPAQ

Annotated regions:
phrase: GRMQVIRDGERLFVVDYAHTPDALIQVLTTLKRHVSQDLWAVFGCGGDRDRGKRPLMTQAALDYSDIVLLTSDNPRTENPEQIFADMKAGIHFDGKNVHEIHDRREAIKFAVQQAKSGDIVVIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: VTGTNGKTTISRLVAELLMLQGQACAVMGTTGNGILPNLEASSHTTLDALHLQNALHEYAVQGAKFASIEASSHGLEQGRLAGCDIEIAAYSNLSRDHLDYHGTLEAYAEAKSRLFKFESLKVAIINIDDAHAHVMIDAAKCNPAQPQILTYSTTQKADYQVQDIQYSLSGVHFRLITKNGDFTVHSPLLGHFNIENLVASLIM
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central
Protein sequence:
MAIRYVFGRAGRGKSYFVLEEIKKRLEGEGHHKLFLLVPEQFTLQAERDLIGKQALKGIMRAEVLSFTRLTHYVFNEVGGITKIPINEIGKNMILRKIADESSKDLSIYKSIAKQEGFITKLNDLICEMKQHDITPIELTMEFNEMEEDTLLKRKLNDIILLYQKFNNYLRDRYVDNEDNVNLLIENIEKVQFLEGAEVWIDGFQSFTPQIFRVIEKLAEKVKNLTITFTMELKSKESDQDLFHINRKTYLKIKSIAQRLGLEEEIIDLDRNERPVLPKVQEICHIEKELYAYPYQQYTGEITHLDVFSGSNLYTEMENVAAQIIHLVRDKGYRWKDIALVSAGLEEYSMILKRVFEEYSIPYFMDEKRSIMNNPIVELILSSIGILARGYQYEDVFRFLKTGFGDLNKDEVEELENYVLQYGIKGKDYAVPFTKGFTNKKHEEIEQEESDEIHEEKIKYNEFRERFIAPFLKFEKKIYRKKKVGHITKALFEFMKDLNIEAKLDQWIEELREKKYFEYVNENTQIWNKVMEILDQLTEILAEESTTLKEYGRILEAGFLACEVGVIPTTIDQVLVGSIERSKSHDIKALFVIGVNDGILPSSREDGGILLDHERESLDKKGLSIGNTLENALLEEQFTIYSALSKPTEYLWISYALADQEGKAQRQSILIDRIKKLFRNLNIQSDVVPTLNRQLHLITTPISTFKYMTESIRQNIDDKPMEDIWWDVYQWYSNESQWDERRNLMVKGLFHENQISYIGEQKARSLYEHPIKSSVSRLERFANCPFSHFVTYGLRPKERKEYQLSNPDIGRLFHDSMENFTKELVNEQIQWKDLTREQSDYFVEKVIDEMVPEFEHGIMLSTHRYQYLVTRLKRISKRAMWTLTEHIKKGQFVPMGHEIIFGLEGDIPPIVIELESGEKIYLEGRIDRVDILNDEDGNYVKIIDYKSGSKEFSLSDVYYGFQIQLLVYLDAVLSSQSQKYQAEVHPGGIFYFKIDDPMVKTTEKAVKEVEKEINKRLKMKGLVLKDVNIIKKIDEDIGRSSSILPASLTKEGEISKTSSALPEEDFKALLKHVRGLVKEIGEEMLKGNVKIEPFKKGGDTSCKYCAYISICQFDHSFHENQYKTIKELKNEEVLEKIRKENENI

Annotated regions:
phrase: YVFGRAGRGKSYFVLEEIKKRLEGEGHHKLFLLVPEQFTLQAERDLIGKQALKGIMRAEVLSFTRLTHYVFNEVGGITKIPINEIGKNMILRKIADESSKDLSIYKSIAKQEGFITKLNDLICEMKQHDITPIELTMEFNEMEEDTLLKRKLNDIILLYQKFNNYLRDRYVDNEDNVNLLIENIEKVQFLEGAEVWIDGFQSFTPQIFRVIEKLAEKVKNLTITFTMELKSKESDQDLFHINRKTYLKIKSIAQRLGLEEEIIDLDRNERPVLPKVQEICHI
type: DOMAIN
name: ADDB_N
description: ATP-dependent helicase/deoxyribonuclease subunit B, N-terminal

phrase: RPVLPKVQEICHIEKELYAYPYQQYTGEITHLDVFSGSNLYTEMENVAAQIIHLVRDKGYRWKDIALVSAGLEEYSMILKRVFEEYSIPYFMDEKRSIMNNPIVELILSSIGILARGYQYEDVFRFLKTGFGDLNKDEVEELENYVLQYGIKGKDYAVPFTKGFTNKKHEEIEQEESDEIHEEKIKYNEFRERFIAPFLKFEKKIYRKKKVGHITKALFEFMKDLNIEAKLDQWIEELREKKYFEYVNENTQIWNKVMEILDQLTEILAEESTTLKEYGRILEAGFLACEVGVIPTTIDQVLVGSIERSK
type: DOMAIN
name: DNA_helicase_UvrD-like_C
description: UvrD-like DNA helicase, C-terminal

phrase: SSVSRLERFANCPFSHFVTYGLRPKERKEYQLSNPDIGRLFHDSMENFTKELVNEQIQWKDLTREQSDYFVEKVIDEMVPEFEHGIMLSTHRYQYLVTRLKRISKRAMWTLTEHIKKGQFVPMGHEIIFGLEGDIPPIVIELESGEKIYLEGRIDRVDILNDEDGNYVKIIDYKSGSKEFSLSDVYYGFQIQLLVYLDAVLSSQSQKYQAEVHPGGIFYFKIDDPMVKTTEKAVKEVEKEINKRLKMKGLVLKDVNIIKKIDEDIGRSSSILPASLTKEGEISKTSSALPEEDFKALLKHVRGLVKEIGEEMLKGNVKIEPFKKGGDTSCKYCAYISIC
type: DOMAIN
name: PDDEXK_AddAB-type
description: PD-(D/E)XK endonuclease-like domain, AddAB-type
Protein sequence:
MVKYIFITGGVVSSLGKGICSSSLATILEARGLTITMTKLDPYINVDPGTMSPFQHGEVYVTDDGAETDLDLGHYERFSNSVMSKANNFTTGQIYESVIKKERRGEYLGGTVQVIPHITDEIKRNIIKSGEGVDVALIEVGGTVGDIESLPFLEAIRQMRVELGDNRCLFIHLTLVPYISPAKEIKTKPTQHSVKELRTIGIQPDILICRSERVIPLSDRQKIALFTNVKEKAVITALDADSIYRIPRMLHEQGLDQIVVDKLHLDASPADLSDWDSVVEGLFAPERTVKIALVGKYVDHADAYKSLTEALIHAGIHSKTQVEIIKVDSEEIENNGTNVLKQAEAILVPGGFGERGVDGKIATIRYARENNVPYLGICLGMQSAVIEYARNKMGLEGANSTEFMPNSPYPVIALITEWLSEDGTIEKRDASSDIGGTMRLGSQKCQLVPGSLAHKVYGKDVITERHRHRYEFNNTFLEQFETEGLRISGKSMDGRLVEIIEIPQHRWFLACQFHPEFTSKPRTGHPLFSGFVSAAIDYSSSNDKAQ

Annotated regions:
phrase: KYIFITGGVVSSLGKGICSSSLATILEARGLTITMTKLDPYINVDPGTMSPFQHGEVYVTDDGAETDLDLGHYERFSNSVMSKANNFTTGQIYESVIKKERRGEYLGGTVQVIPHITDEIKRNIIKSGEGVDVALIEVGGTVGDIESLPFLEAIRQMRVELGDNRCLFIHLTLVPYISPAKEIKTKPTQHSVKELRTIGIQPDILICRSERVIPLSDRQKIALFTNVKEKAVITALDADSIYRIPRMLHEQGLDQIVV
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: KYIFITGGVVSSLGKGICSSSLATILEARGLTITMTKLDPYINVDPGTMSPFQHGEVYVTDDGAETDLDLGHYERFSNSVMSKANNFTTGQIYESVIKKERRGEYLGGTVQVIPHITDEIKRNIIKSGEGVDVALIEVGGTVGDIESLPFLEAIRQMRVELGDNRCLFIHLTLVPYISPAKEIKTKPTQHSVKELRTIGIQPDILICRSERVIPLSDRQKIALFTNVKEKAVITALDADSIYRIPRMLHEQGLDQIVVDKLH
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: VKIALVGKYVDHADAYKSLTEALIHAGIHSKTQVEIIKVDSEEIENNGTNVLKQAEAILVPGGFGERGVDGKIATIRYARENNVPYLGICLGMQSAVIEYARNKMGLEGANSTEFMPNSPYPVIALITEWLSEDGTIEKRDASSDIGGTMRLGSQKCQLVPGSLAHKVYGKDVITERHRHRYEFNNTFLEQFETEGLRISGKSMDGRLVEIIEIPQHRWFLACQFHPEFTSKPRTGHPLFSGF
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain

phrase: ADAYKSLTEALIHAGIHSKTQVEIIKVDSEEIENNGTNVLKQAEAILVPGGFGERGVDGKIATIRYARENNVPYLGICLGMQSAVIEYARNKMGLEGANSTEFMPNSPYPVIALITEWLSEDGTIEKRDASSDIGGTMRLGSQKCQLVPGSLAHKVYGKDVITERHRHRYEFNNTFLEQFETEGLRISGKSMDGRLVEIIEIPQHRWFLACQFHPEFTSKPRTGHPLFSGFV
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase
Protein sequence:
MSAAFDPSSYATQLDAKVARLRELLAPFGAPEPAVFDSPREHYRLRAEFRLWREDGQRHYAMFAQGDKHKAILIDDFPIASQRINALMPRLKAAWQASEELGNRLFQVEFLTTLAGDAMITMCYHRPLDEAWEVEARQLAEALGVSVIGRSKGKRLVIGRDYAIEELDVAGRVFSYRQPEGAFTQPNGAVNQKMLSWAFEAIGEREDDLLELYCGNGNFTLPLATRVRQVLATEISKTSVNAALSNLDENAVDNVRLVRLSAEELTQALNEVRPFRRLEGIDLKSYEFGTVFVDPPRAGMDPDTCELTRRFERILYISCNPETLAANIAQLQDTHRIERCALFDQFPYTHHMESGVLLVRR

Annotated regions:
phrase: DPPRAGMDPDTCELTRRFERILYISCNPE
type: ACTIVE_SITE
name: MeTrfase_TrmA_AS
description: RNA methyltransferase TrmA, active site

phrase: FDQFPYTHHM
type: CONSERVED_SITE
name: MeTrfase_TrmA_CS
description: RNA methyltransferase TrmA, conserved site
Protein sequence:
MSTTAKPNIRHLSIEEINDYFESIGEKKFRVKQVWEWLWQKQALNFQSMSNLSKDLRAKLEETFDFTSLSEDATQFSEDGTVKTRFKTFDGHKVEGVLIPTEERLTACVSSQVGCSLSCKFCATGYMDKKRNLVFDEIFDEVVLINQQAMKMHEKKLTNIVFMGMGEPLLNYKNMMKAVERITSPDGLAMSPRRITVSTAGVSKMIRQLGDDGVRFKLALSLHAPTDKKRNEIMPINETNNLKSLIDALNYFYKMTKSEITLEYILFDNFNDSFEDAEDLVKLYRQIPADLVNIIEYNPIDFARFKKPTEEKTAAFMQYLEKNRVNARLRKSRGKDIDAACGQLANK

Annotated regions:
phrase: NIRHLSIEEINDYFESIGEKKFRVKQVWEWLWQKQALNFQSMSNLSKDLRAKLEE
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: LTACVSSQVGCSLSCKFCATGYMDKKRNLVFDEIFDEVVLINQQAMKMHEKKLTNIVFMGMGEPLLNYKNMMKAVERITSPDGLAMSPRRITVSTAGVSKMIRQLGDDGVRFKLALSLHAPTDKKRNEIMPINETNNLKSLIDALNYFYKMTKSEITLEYILFDNFNDSFEDAEDLVKLYRQIPADLVNIIEYNPIDFARFKKPTEEKTAAFMQ
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: SSQVGCSLSCKFCATGYMDKKRNLVFDEIFDEVVLINQQAMKMHEKKLTNIVFMGMGEPLLNYKNMMKAVERITSPDGLAMSPRRITVSTAGVSKMIRQLGDDGVRFKLALSLHAPTDKKRNEIMPINETNNLKSLIDALNYFYKMTKSEITLEYILFDNFNDSFEDAED
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TEERLTACVSSQVGCSLSCKFCATGYMDKKRNLVFDEIFDEVVLINQQAMKMHEKKLTNIVFMGMGEPLLNYKNMMKAVERITSPDGLAMSPRRITVSTAGVSKMIRQLGDDGVRFKLALSLHAPTDKKRNEIMPINETNNLKSLIDALNYFYKMTKSEITLEYILFDNFNDSFEDAEDLVKLYRQIPADLVNIIEYNPIDFARFKKPTEEKTAAFMQYLEKNRVNARLRKSRGK
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MKPENKIPVLTRLSDKMKAVVNFQQPGLPPWPADGDIETQRQYYLLERRFWNADAPSMTTRTCAVPTPYGDVTTRLYSPQPTSQATLYYLHGGGFILGNLDTHDRIMRLLARYTGCTVIGIDYSLSPQARYPQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYGLQDSVSRRLFGGAWDGLTREDLDMYEKAYLRNDEDRESPWYCLFNNDLTRDVPPCFIASAEFDPLIDDSRLLHQTLQAHQQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMARMKTPR

Annotated regions:
phrase: IGFAGDSAGAML
type: ACTIVE_SITE
name: Lipase_GDXG_put_SER_AS
description: Lipase, GDXG, putative serine active site

phrase: YYLHGGGFILGNLDTHDRIMRLLARYTGCTVIGIDYSLSPQARYPQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYGLQDSVSRRLFGGAWDGLTREDLDMYEKAYLRNDEDRESPWYCLFNNDLTRDVPPCFIASAEFDPLIDDSRLLHQTLQAHQQPCEYKMYPGTLHAF
type: DOMAIN
name: AB_hydrolase_3
description: Alpha/beta hydrolase fold-3
Protein sequence:
MFDIQEELKKLPDKPGVYIMKDENGEIIYVGKAVVLKNRVRQYFQSLSNQTPKVRAMVAHIKEFEYIVTDTELEALILECNLIKKHRPKFNILLKDDKNYPYIKVTMNEDFPRILMTRRVEKDGAKYFGPYTSAYAVRETIDLVKKLFPVKTCSKVLPRDIGKGRPCLNYHIYQCLGPCQGNVSKEEYRFMMQDVCNFLGGRQEDIIKKLEKDMKEAADNLEFERAARIRDKINSLKHIAEKQKIISTAMEDQDVIAFAKSETDSCIQVFFIRGGKLIGREHFILEGTSDVSDSELMTAFVKQFYSSAAYVPGQIILQEDIDEMEIIEKWLSGKRGTKTYIKVPRRGEKLKLVEMVSKNALIELNQFKERIKKEAALAKEGMEKLKELLNLDRLPRRIEAYDISNTGSTEIVGSMVVFENGSPKKSDYRRFKIKSINVQNDYQSMQEVIFRRLKRAQKEMTEKDEGGGKDVGEKGAGFGTLPDVLLVDGGTGHVNAVRSVLEELDFNIPVYGMVKDDNHRTRGLVTGEREFDLSKDIVLLRFVTAIQDEAHRFALEYNRKLRAKRYSGSVLDNIEGVGPKRKKELIRHFGSVKAIKEAEPGEIAKVKGISRDLAQKIYDYFRQQE

Annotated regions:
phrase: PGVYIMKDENGEIIYVGKAVVLKNRVRQYFQSLSNQTPKVRAMVAHIKEFEYIVTDTELEALILECNLIKKHRPKF
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: SVLDNIEGVGPKRKKELIR
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: GEIAKVKGISRDLAQKIYD
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: DIIKKLEKDMKEAADNLEFERAARIRDKINSLK
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: KPGVYIMKDENGEIIYVGKAVVLKNRVRQYFQSLSNQTPKVRAMVAHIKEFEYIVTDTELEALILECNLIKKHRPKFNILLK
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: EDIIKKLEKDMKEAADNLEFERAARIRDKINSLKH
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: VIAFAKSETDSCIQVFFIRGGKLIGREHFILEGTSDVSDSELMTAFVKQFYSSAAYVPGQIILQEDIDEMEIIEKWLSGKRGTKTYIKVPRRGEKLKLVEMVSKNALIELNQFKERIKKEAALAKEGMEKLKELLNLDRLPRRIEAYDISNTGSTEIVGSMVVFENGSPKKSDYRRFKIKSINVQNDYQSMQEVIFRRLKRAQKEMTEKDEGGGKDVGEKGAGFGTLPDVLLVDGGTGHVNAVRSV
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: LPDKPGVYIMKDENGEIIYVGKAVVLKNRVRQYFQSLSNQTPKVRAMVAHIKEFEYIVTDTELEALILECNLIKKHRPKFN
type: DOMAIN
name: GIY-YIG_UvrC_Cho
description: UvrC/Cho-like, GIY-YIG domain

phrase: KELLNLDRLPRRIEAYDISNTGSTEIVGSMVVFENGSPKKSDYRRFKIKSINVQNDYQSMQEVIFRRLKRAQKEMTEKDEGGGKDVGEKGAGFGTLPDVLLVDGGTGHVNAVRSVLEELDFNIPVYGMVKDDNHRTRGLVTGEREFDLSKDIVLLRFVTAIQDEAHRF
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: DKPGVYIMKDENGEIIYVGKAVVLKNRVRQYFQSLSNQTPKVRAMVAHIKEFEYIVTDTELEALILECNLIKKHRPKFN
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease
Protein sequence:
MSKHSLIENLKKQIEPIAEGLDYELYHIEFVKEGKENYLRIYIDSENGVSLEGCEKVSRAVSELLDDIDPIQESYYLEVSSPGIDRVLYTDKHLQKYKGYNIVLNLYSPIDKKKKYEGELVDFNENEINIKVEENIVTIPREKISKTTLKGEL

Annotated regions:
phrase: GIDRVLYTDKHLQKYKGYNIVLNLYSPIDKKKKYEGELVDFNENEINIKVEENIVTIPREKISKTTLKGE
type: DOMAIN
name: RimP_C
description: Ribosome maturation factor RimP, C-terminal

phrase: LYTDKHLQKYKGYNIVLNLYSPIDKKKKYEGELVDFNENEINIKVEENIVTIPREKISKTTLK
type: DOMAIN
name: RimP_C
description: Ribosome maturation factor RimP, C-terminal

phrase: IEPIAEGLDYELYHIEFVKEGKENYLRIYIDSENGVSLEGCEKVSRAVSELLDDIDPIQESYYLEVSSPGI
type: DOMAIN
name: RimP_N
description: Ribosome maturation factor RimP, N-terminal
Protein sequence:
MTNHDLASLSQTIETAFEGRDAVNTGTRGAVRDAVETALNLLDSGKVRVAERSEDGTWTVNQWLKKAVLLSFRLNPMELVRGGPGEAVWWDKVASKFDGWSVNEFEKAGFRAVPNCVVRRSAYIAPNAVLMPSFVNLGAYVGEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPMQAGPTIIEDNCFIGARSEVVEGCIVREGSVLGMGVFIGKSTKIVDRATGEVMYGEVPPYSVVVAGSMASGSTMANGQPAPNLYCAVIVKRVDEKTRSKTGINELLRD

Annotated regions:
phrase: VGEGTMVDTWATVGSCAQIGKNVHLSGG
type: CONSERVED_SITE
name: Hexapep_transf_CS
description: Hexapeptide transferase, conserved site

phrase: LSQTIETAFEGRDAVNTGTRGAVRDAVETALNLLDSGKVRVAERSEDGTWTVNQWLKKAVLLSFR
type: DOMAIN
name: THP_succinylTrfase_dom1
description: Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1

phrase: PTIIEDNCFIGARSEVVEGCIVREGSVLGMGVFI
type: REPEAT
name: Hexapep
description: Hexapeptide repeat
Protein sequence:
MTLTTTHIADPSHASPLGKATEYQSHYAPELLYPIPRQLKRSELGITDANLPFVGEDLWNAYELSWLNSKGKPVVAVGTFRVPANSPNLIESKSFKLYLNSFNQSSFDNIAAVSATMSRDLSAAAGSPIIVTLEPLSASPLASIGTPDGILLDELDITCDRYQPEPALLATLPGENVEETLYSHLLKSNCLVTGQPDWAMVVIRYRGKPIDRAGLLRYIVSFRNHNEFHEQCVERIFSDIRVRCQPEVLAVHARYTRRGGLDINPFRSTGDYAAPDNTREIRQ

Annotated regions:
phrase: YQSHYAPELLYPIPRQLKRSELGITDANLPFVGEDLWNAYELSWLNSKGKPVVAVGTFRVPANSPNLIESKSFKLYLNSFNQSSFDNIAAVSATMSRDLSAAAGSPIIVT
type: DOMAIN
name: QueF_N
description: NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal
Protein sequence:
MNHIVANKIQQILGYTFTHQELLKQALTHRSASSKHNERLEFLGDSILSFVIANALYQHFPYIDEGDMSRMRATLVRGNTLAEIAYEFDLGEYLQLGQGELKSGGFRRESILANTVEALIGSIYLDSNIKTVEELILKWYEKRLEKISPGDTQKDPKTRLQEYLQSKHLSLPSYFIVEVYGEAHNQLFTIHCEVSTLSTSFIGKGTSRRKAEQDAARKALIKLGVE

Annotated regions:
phrase: ELLKQALTHRSASSKHNERLEFLGDSILSFVIANALYQHFPYIDEGDMSRMRATLVRGNTLAEIAYEFDLGEYLQLGQGELKSGGFRRESILANTVEALIGSIYLDSNIKTVEELILKWYEKRLEKIS
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: PKTRLQEYLQSKHLSLPSYFIVEVYGEAHNQLFTIHCEVSTLSTSFIGKGTSRRKAEQDAARKALIKL
type: DOMAIN
name: dsRBD_dom
description: Double-stranded RNA-binding domain

phrase: QELLKQALTHRSASSKHNERLEFLGDSILSFVIANALYQHFPYIDEGDMSRMRATLVRGNTLAEIAYEFDLGEYLQLGQGELKSGGFRRESILANTVEALIGSIYLDSNIKTVEELILKWY
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: DPKTRLQEYLQSKHLSLPSYFIVEVYGEAHNQLFTIHCEVSTLSTSFIGKGTSRRKAEQDAARKALIKLG
type: DOMAIN
name: dsRBD_dom
description: Double-stranded RNA-binding domain

phrase: ANKIQQILGYTFTHQELLKQALTHRSASSKHNERLEFLGDSILSFVIANALYQHFPYIDEGDMSRMRATLVRGNTLAEIAYEFDLGEYLQLGQGELKSGGFRRESILANTVEALIGSIYLDS
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: PKTRLQEYLQSKHLSLPSYFIVEVYGEAHNQLFTIHCEVSTLSTSFIGKGTSRRKAEQDAARKALIK
type: DOMAIN
name: dsRBD_dom
description: Double-stranded RNA-binding domain

phrase: ERLEFLGD
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: ELLKQALTHRSASSKHNERLEFLGDSILSFVIANALYQHFPYIDEGDMSRMRATLVRGNTLAEIAYEFDLGEYLQLGQGELKSGGFRRESILANTVEALIGSIYLDSNIKTVEELILKWYEKRLEKIS
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain
Protein sequence:
MSQATTTSTSFQNTLEFAKQADQNDKLKGFRERFLMPQHEGKDVVYFTGNSLGLQPKTTQSYLQQELNDWAKFGVEGHFLAKNPWLSYHELLTDKMAKIVGALPQETVMMNQLTVNLHLLMVSFYKPTKSRYKILCEAKAFPSDQYALQSQVKFHGYTIEDAIVEVAPREGEYHIREEDIFAAIEKNKESLALVMIGGVNYFTGQVFDMKAIAEVGHKAGAIVGFDLAHGAGNIKLHLHDWNVDFAAWCSYKYLNSGPGSVAGAFVHEKHLKNTELPLFAGWWGHDKKTRFLMDNTFVPMETAERWQLSNAPIFSMAACRASLDIFDEVGMDALIAKSKDLVAYLEFIVNDINKQKNNCLEIITPNENRGCQLSIVANGYGKKLYTSLIEKGVIPDWREPNVIRCAAIPLYNSFEDMYRFGEILKELL

Annotated regions:
Protein sequence:
MSSKPRVVLGVGGGIAAYKACEVLRGLTESGHDVRVVPTEAALNFVGAATFEALSGHPVHTGVFTEVPEVQHVRVGKDADLVLVVPATADLLARAAHGLADDLLTNTLLTARCPVAFFPAMHTEMWEHPATRDNVALLRSRGAVVTEPDSGRLTGVDTGKGRLADPREIVDVARLLLARSDALPRDLEGLRVVVSAGGTREPLDPVRHLGNRSSGKQGYALARVAAQRGADVTLVAAHTEALPEPAGAEVVHVSTARRLGAAVEEAASTADVVVMAAAVADFRPADTADHKIKKTDHSPDPTISLVRNPDILAGLVEARRPGQVIVGFAAETGDEHGSVLEHARAKLKRKGCDLLVVNAVGEGKAFEMEENTGWLLSADGTEQRIPLGAKSLLAATVWDAVTELVRHRAHRQ

Annotated regions:
phrase: LEGLRVVVSAGGTREPLDPVRHLGNRSSGKQGYALARVAAQRGADVTLVAAHTEALPEPAGAEVVHVSTARRLGAAVEEAASTADVVVMAAAVADFRPADTADHKIKKTDHSPDPTISLVRNPDILAGLVEARRPGQVIVGFAAETGDEHGSVLEHARAKLKRKGCDLLVVNAVGEGKAFEMEENTGW
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal

phrase: RVVLGVGGGIAAYKACEVLRGLTESGHDVRVVPTEAALNFVGAATFEALSGHPVHTGVFTEVPEVQHVRVGKDADLVLVVPATADLLARAAHGLADDLLTNTLLTARCPVAFFPAMHTEMWEHPATRDNVALLRSRGAVVTEPDSGRLTGVDTGKGRLADPREIV
type: DOMAIN
name: Flavoprotein
description: Flavoprotein
Protein sequence:
MPSDIMEQRGVSTPSHFHEDIHITSERQFGFMKTDMMPENQGGRDRLSSMPKSSWTSESYQLKPQSSFSGSHPSGSPNARNTTNGSQWESSLFSSSMSDLFSRKLRLQGSDMLSTMSANTVVTHREEEPSESLEEIEAQTIGNLLPDEDDLFAEVTGEVGRKSRANTGDELDEFDLFSSVGGMELDGDIFSSVSHRNGERGGNNSVGELNRGEIPSRTLLVGNISSNVEDYELKVLFEQFGDIQALHTACKNRGFIMVSYCDIRAAQNAARALQNKLLRGTKLDIRYSISKENPSQKDTSKGALLVNNLDSSISNQELNRLVKSYGEVKEIRRTMHDNSQIYIEFFDVRAAAAALGGLNGLEVAGKKLQLVPTYPEGTRYTSQCAANDTEGCLPKTSYSNTSSGHIGRHFPGMISSTSSDGGSMRVIHNSIGSPVNSFIERHRSLSIPIGFPPSANGISASKPVGLQEHGHHFDNSNMGIQSMPNLHPHSFSEYVDNFANGSPYTSSAFSEMVSDGSKANEGFMIHNVRGVEGFSGGGIGSPMHQSSRRPINLWSNSNTQQQNPSSGMMWPNSPSHINSIPTQRPPVTVFSRAPPIMVNMASSPVHHHIGSAPVLNSPFWDRRQAYVAESLESSGFHIGSHGSMGIPGSSPSHPMDIGSHKTFSVGGNRMDVNSQNAVLRSPQQLSHLFPGRSPMGSMPGSFDSPNERYRNLSHRRSESSSSNADKKLYELDVDRILRGEDRRTTLMIKNIPNKYTSKMLLSAIDEHCKGTYDFLYLPIDFKNKCNVGYAFINLIEPEKIVPFFKAFNGKKWEKFNSEKVATLTYARIQGKTALIAHFQNSSLMNEDKRCRPILFHTDGPNAGDQEPFPMGSNIRSRPGKPRSSSIDNYNSFSISSVSENREETPNGTDPFLKEN

Annotated regions:
phrase: RTLLVGNISSNVEDYELKVLFEQFGDIQALHTACKNRGFIMVSYCDIRAAQNAARALQNKLLRGTKLDIRYSI
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: LLVGNISSNVEDYELKVLFEQFGDIQALHTACKNRGFIMVSYCDIRAAQNAARALQNKLLRGTK
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: LLVNNLDSSISNQELNRLVKSYGEVKEIRRTMHDNSQIYIEFFDVRAAAAALGGLNGLEVAGKK
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: LMIKNIPNKYTSKMLLSAIDEHCKGTYDFLYLPIDFKNKCNVGYAFINLIEPEKIVPFFKAFNGKKWEKFNSEKVATLTYARIQG
type: DOMAIN
name: MEI2-like_RRM3
description: MEI2-like, RNA recognition motif 3

phrase: ALLVNNLDSSISNQELNRLVKSYGEVKEIRRTMHDNSQIYIEFFDVRAAAAALGGLNGLEVAGKKLQL
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: TLLVGNISSNVEDYELKVLFEQFGDIQALHTACKNRGFIMVSYCDIRAAQNAARALQNKLLRGTKLDI
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: SRTLLVGNISSNVEDYELKVLFEQFGDIQALHTACKNRGFIMVSYCDIRAAQNAARALQNKLLRGTKLDIRYSISK
type: DOMAIN
name: MEI2-like_RRM1
description: MEI2-like, RNA recognition motif 1

phrase: RTTLMIKNIPNKYTSKMLLSAIDEHCKGTYDFLYLPIDFKNKCNVGYAFINLIEPEKIVPFFKAFNGKKWEKFNSEKVATLTYARIQGKTALIAHF
type: DOMAIN
name: Mei2-like_Rrm_C
description: Mei2-like, C-terminal RNA recognition motif

phrase: GALLVNNLDSSISNQELNRLVKSYGEVKEIRRTMHDNSQIYIEFFDVRAAAAALGGLNGLEVAGKKLQLVPTY
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain
Protein sequence:
MFAFRNRAVTQTLLVRRYSTKRIPQNLTEKIVQRYAVGLPEGKQVQSGDYVSIRPSHCMTHDNSWPVATKFKGLGAKAVKDNRQVVMTLDHDVQNKSEKNLEKYANIENFAGEQGIDFYPAGRGIGHQVMVEEGYAFPYNLTVASDSHSNMYGGIGCLGTPIVRTDAASVWATGQTWWQIPPVARVELKGQLPAGVFGKDVIIALCGIFNNDEVLNHAIEFVGDGVEHLSVDERLTIANMTTEWGALTGLFPVDETLRQWYEYRLTRLPQPHARVNDGTVAALKDAVQADTDAKYAKNLTIDLSTLSPFLSGPNSVKVYNSLADLSAQDIKINKAYLVSCTNSRLSDIEAAANVIKNNKVAEGVEFYVAAASSFVQKDAEASGAWQTLINAGAKPLPAGCGPCIGLGTGLLEDGEVGISATNRNFKGRMGSKDALAYLASPEVVAASAVLGKIGFPEEVYGSPVPGAKGVSSSISVTEAVEAEADAEAAESDPAPSGGVLDGFPAQITGELVLCDADNINTDGIYPGKYTYQDDVPREKMAEVCMENYDPDFGSKTGAGDIIVSGFNFGTGSSREQAATCILARDMQLVIAGSFGNIFSRNSINNALLTLEIPALINKLRKRYEGQPAELTRRTGWFATWDVPAATVTVTDGKNGPVILKQKVGELGQNLQEIIVKGGLEGWVKAQL

Annotated regions:
phrase: INKAYLVSCTNSRLSD
type: BINDING_SITE
name: Aconitase_4Fe-4S_BS
description: Aconitase family, 4Fe-4S cluster binding site

phrase: FPYNLTVASDSHS
type: DOMAIN
name: Acoase/IPM_deHydtase_lsu_aba
description: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain

phrase: MYGGIGCLGTPIVRT
type: DOMAIN
name: Acoase/IPM_deHydtase_lsu_aba
description: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain

phrase: EVLNHAIEFVGDG
type: DOMAIN
name: Acoase/IPM_deHydtase_lsu_aba
description: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain

phrase: EHLSVDERLTIAN
type: DOMAIN
name: Acoase/IPM_deHydtase_lsu_aba
description: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain

phrase: YLVSCTNSRLS
type: DOMAIN
name: Acoase/IPM_deHydtase_lsu_aba
description: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain

phrase: GAKPLPAGCGPCI
type: DOMAIN
name: Acoase/IPM_deHydtase_lsu_aba
description: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain

phrase: GAKPLPAGCGPCI
type: BINDING_SITE
name: Aconitase_4Fe-4S_BS
description: Aconitase family, 4Fe-4S cluster binding site

phrase: CDADNINTDGIYPGKYTYQDDVPREKMAEVCMENYDPDFGSKTGAGDIIVSGFNFGTGSSREQAATCILARDMQLVIAGSFGNIFSRNSINNALLTLEIPALINKLRKRYEGQPAELTRRTGWFATWD
type: DOMAIN
name: Homoaconitase_swivel
description: Homoaconitase, swivel domain

phrase: KIVQRYAVGLPEGKQVQSGDYVSIRPSHCMTHDNSWPVATKFKGLGAKAVKDNRQVVMTLDHDVQNKSEKNLEKYANIENFAGEQGIDFYPAGRGIGHQVMVEEGYAFPYNLTVASDSHSNMYGGIGCLGTPIVRTDAASVWATGQTWWQIPPVARVELKGQLPAGVFGKDVIIALCGIFNNDEVLNHAIEFVGDGVEHLSVDERLTIANMTTEWGALTGLFPVDETLRQWYEYRLTRLPQPHARVNDGTVAALKDAVQADTDAKYAKNLTIDLSTLSPFLSGPNSVKVYNSLADLSAQDIKINKAYLVSCTNSRLSDIEAAANVIKNNKVAEGVEFYVAAASSFVQKDAEASGAWQTLINAGAKPLPAGCGPCIGLGTGLLEDGEVGISATNRNFKGRMGSKDALAYLASPEVVAASAVL
type: DOMAIN
name: Acoase/IPM_deHydtase_lsu_aba
description: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain

phrase: ESDPAPSGGVLDGFPAQITGELVLCDADNINTDGIYPGKYTYQDDVPREKMAEVCMENYDPDFGSKTGAGDIIVSGFNFGTGSSREQAATCILARDMQLVIAGSFGNIFSRNSINNALLTLEIP
type: DOMAIN
name: AconitaseA/IPMdHydase_ssu_swvl
description: Aconitase A/isopropylmalate dehydratase small subunit, swivel domain