nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MWIPSKLTRPGRLHNAIVRPRVLELLQQAPYYKLVLFRSPAGYGKTTMAAQWLADKTNVGWYSIDDSDNDGFRFINYLLQALNKATNGNCNNAQKLAEKRQFSSLRSLFSDVFAEMVDFHQECYVVLDDYHVINNEEVHEAMRFFLKHMPDNLTLVVTSRANPPLGTANLRVRDLMIEIGNEMLAFDTEETTRFFNQRVADGIDEDTANNLRNYVEGWPSALQLIALQAQHQKRTLAQSAESVSQFNHAHLWDYLVEEVFDLLDADTRKFLMQVSVLDHFNDELVYALTQREDALGMIESLNRYGLFIYPLEGEQNWFRFHNLFGEFLSHERQARIPQQEQELNRNAAIAWLKQKSPHQAIRHAQKAYDGELVAEILNEFGWKMFNQGELSTLESAINLLEKDLLFSNPKLTMLRAWLAQSQHRYNQVGTLLAEAENEHKKRNIDLDIQYQGQANALLAQVAINSNDPEKALELAELALSQLDSTVYRSRIVATSVVGEVNHVIGRLDRALPMMQQTEKLARQYQVYHQALWAILQQSEILIAQGYVQAAFELQDSAFRLIEEQQLQHVPLHEFLLRVRAQVLWCWNRLDEAEECAYKGLQILENHAPSKHLHSYSMLARIAIGRGELDRAGKFIEHIQHLMKQSTYHVDWTANASLSLILYWQAKGKLNAIQEWLNTAVRPENACNHFCQLQWRNIARAHINLGQYDQARQALDFLQSEAEKANLVTDRNRNLIIEAIFAVHQKDENQAKVLLKEALQLTNQTGMVGNFLIDGATIGTLLEKLTNRHELGDLERHRALQLMKDISSNQRSRSVHFDEEFVEKLVTHPNVPELVRTSPLTQREWQVLGLIYSGFSNEQIAQELDVAGTTIKTHIRNLYQKLNIANRKEAVTTAENLLQLMGY

Annotated regions:
phrase: GFSNEQIAQELDVAGTTIKTHIRNLYQ
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: ELVRTSPLTQREWQVLGLIYSGFSNEQIAQELDVAGTTIKTHIRNLYQKLNIANRKEAVTTAENL
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: GQANALLAQVAINSNDPEKALELAELALSQLDSTVYRSRIVATSVVGEVNHVIGRLDRALPMMQQTEKLARQYQVYHQALWAILQQSEILIAQGYVQAAFELQDSAFRLIEEQQLQHVPLHEFLLRVRAQVLWCWNRLDEAEECAYKGLQILENHAPSKHLHSYSMLARIAIGRGELDRAGKFIEHIQHLMKQSTYHVDWTANASLSLILYWQAKGKLNAIQEWLNTAVRPENACNHFCQLQWRNIARAHINLGQYDQARQALDFLQSEAEKANLVTDRNRNLIIEAIFAVHQKDENQAKVLLKEALQLTNQTGMVGNFLIDGATIGTLLEKLTN
type: DOMAIN
name: TPR_MalT
description: MalT-like TPR region

phrase: TSPLTQREWQVLGLIYSGFSNEQIAQELDVAGTTIKTHIRNLYQKLNIANRKEAVTT
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: PLTQREWQVLGLIYSGFSNEQIAQELDVAGTTIKTHIRNLYQKLNIANRKEAVT
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: LTQREWQVLGLIYS
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: GFSNEQIAQELDVAGT
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: TIKTHIRNLYQK
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: LTQREWQVLGLIYSGFSNEQIAQELDVAGTTIKTHIRNLYQKLNIANRKEAVTTAE
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal
Protein sequence:
MAKKIQGYIRLQLPAGAANPAPPVGPALGAQGVNIMAFCKDFNARTKDQNGMILPVVITVYTDKSFTFILKSPPASVLLKKAANIATGSGKPNQDRVGKVTKKQCAEIWKLKKADMNAKDEAAGIKTIAGTARQMGIEVVD

Annotated regions:
phrase: IRLQLPAGAANPAPPVGPALGAQGVNIMAFCKDFNARTKDQNGMILPVVITVYTDKS
type: DOMAIN
name: Ribosomal_uL11_N
description: Large ribosomal subunit protein uL11, N-terminal

phrase: KSPPASVLLKKAANIATGSGKPNQDRVGKVTKKQCAEIWKLKKADMNAKDEAAGIKTIAGTARQMGIE
type: DOMAIN
name: Ribosomal_uL11_C
description: Large ribosomal subunit protein uL11, C-terminal

phrase: KTIAGTARQMGIEVV
type: CONSERVED_SITE
name: Ribosomal_uL11_CS
description: Large ribosomal subunit protein uL11, conserved site
Protein sequence:
MKNVTIKSFSEEIKIPINKLIQKFADAGITKTNIDYVSLEEKKILLSYINSHHVNLPKNLSLQKKTKSKLNISSLNGKNKIVKIEVRKKKYLKCDSSLLFKDKIVKNNIDKTFCKKNIKDLNKTKKYVELSKNINEREINFEKKLIKEPILDKSKLKISKNLIKKNVKINKNLNIYKKNEFKQNLKKNKLNKKEKNKKIEINYKVKNKNENIFKKIKSNRLFGSETNFFNNNIDKKTNIRKKISSLTHTFNKPLKKIIKEITIGETISVFELSNKMAVKSHKVVSNMMKLGIKSSINEVIDQDIAQIIAEEMGHKVKLIKNNALEEEIIKNQNKNLYELKNRAPVVTIMGHVDHGKTSLLDYIRTTKVALKEKGGITQCIGAYYVKTKKGIITFIDTPGHAAFTEMRIRGSKITDIIVIVIAADDSIMPQTVEAINHAKIAKVPVIIAINKIDKITSNPEKVKKELIKHGIFLEEYGGDTQCLLISAKSGLGIDFLLDAILLQAEILELKAMHKGMASGTVIESRLEKGKGPVSTILIQEGRLHQGDVVLCGCEYGKIKAMQDSFKCKIKSVGPSIPVEILGLSGIPISGDKITVVKEEKKAREVAIYRQNKLRESKLRINKKIKIENVFSNLNLSTKKNINIVLKSDAHGSSQAISNALILLSNEEIKINIIYSGVGPITETDVALATSSNAIIIGFNVKPDFSNIKNTESIGLNIKCCSIIYEIVDFVKQKIYLSCNTKYNKKIIGILIVKNIFQLPKLGSIAGCIVKEGIVKKNSIAKILRNKSFVHESKIISLRRFKEDVNEVKSGTECGIVIKNFNDIKPLDIIEILELEELNKKI

Annotated regions:
phrase: PVVTIMGHVDHGKTSLLDYIRTTKVALKEKGGITQCIGAYYVKTKKGIITFIDTPGHAAFTEMRIRGSKITDIIVIVIAADDSIMPQTVEAINHAKIAKVPVIIAINKIDKITSNPEKVKKE
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: MKNVTIKSFSEEIKIPINKLIQKFADAGITKTNIDYVSLEEKKILLSYI
type: DOMAIN
name: IF2_N
description: Translation initiation factor IF-2, N-terminal

phrase: ETISVFELSNKMAVKSHKVVSNMMKLGIKSSINEVIDQDIAQIIAEEMGH
type: DOMAIN
name: IF2_N
description: Translation initiation factor IF-2, N-terminal

phrase: PVVTIMGHVDHGKTSLLDYIRTTKVALKEKGGITQCIGAYYVKTKKGIITFIDTPGHAAFTEMRIRGSKITDIIVIVIAADDSIMPQTVEAINHAKIAKVPVIIAINKIDKITSNPEKVKKELIKHGIFLEEYGGDTQCLLISAKSGLGIDFLLDAI
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: ASGTVIESRLEKGKGPVSTILIQEGRLHQGDVVLCGCEYGKIKAMQDSFKCKIKSVGPSIPVEILGLSGIPISGDKITV
type: DOMAIN
name: EF-G-like_DII
description: Elongation factor G-like, domain II

phrase: NRAPVVTIMGHVDHGKTSLLDYIRTTKVALKEKGGITQCIGAYYVKTKKGIITFIDTPGHAAFTEMRIRGSKITDIIVIVIAADDSIMPQTVEAINHAKIAKVPVIIAINKIDKITSNPEKVKKELIKHGIFLEEYGGDTQCLLISAKSGLGIDFLLDAILLQAEIL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: PKNLSLQKKTKSKLNISSLNGKNKIVKIEVRKKK
type: DOMAIN
name: IF2_assoc_dom_bac
description: Initiation factor 2 associated domain, bacterial

phrase: ASGTVIESRLEKGKGPVSTILIQEGRLHQGDVVLCGCEYGKIKAMQDSFKCKIKSVGPSIPVEILGLSGIPISGDKITVVKEEKKAREVAIYR
type: DOMAIN
name: IF2_II
description: Translation initiation factor IF-2, domain II

phrase: SKLRINKKIKIENVFSNLNLSTKKNINIVLKSDAHGSSQAISNALILLSNEEIKINIIYSGVGPITETDVALATSSNAIIIGFNVKPDFSNIKNTESIGLNIKCCSIIYEIVDFV
type: DOMAIN
name: TIF_IF2_dom3
description: Translation initiation factor IF- 2, domain 3
Protein sequence:
MSGVCLLIDAGNSRIKWALADTGRHFVTSGAFEHADDTPDWSTLPAPRGAWISNVAGDAAAARIDALIDAHWPALPRTVVRACAAQCGVTNGYAEPARLGSDRWAGLIGAHAAFPGEHLLIATFGTATTLEALRADGRFTGGLIAPGWALMMRSLGMHTAQLPTVSIDAATSLLDELAANDAHAPFAIDTPHALSAGCLQAQAGLIERAWRDLEKAWKAPVRLVLSGGAADAIVRALTVPHTRHDTLVLTGLALIAHSA

Annotated regions:
Protein sequence:
MDQAGQQAGRIVLGVSGGIAAYKSAILVRRLKDAGFDVRVVMTQGALAFITPLTFQALSGNPVHTTLLDPAAEAGMGHIELARWADLILIAPASANTVARLAAGLSDDLLTTVVLASKAPVWLAPAMNQQMWANALTQRNLQTLTDYGMQVIQPDAGEQACGDVGLGRMPEPEALALQVANYFQQLAQPAHYQPKILAGQHVVITAGPTREAIDPVRYVSNHSTGKMGFALAEACRDAGARVTLIAGPVTLPTPQGIERIDIGSAQELLAVCLKVVNQGCDIFIATAAVADYRAAEVSPQKIKKAGEQLTIQLVKNPDIVATVAQQEKRPFMVGFAAETQHMEQYASSKLVSKKLDMIAVNDVSRSDIGFGSDHNAMTVFFAENYHLVQQHLDKASKAQIAWQLVECIAKAQAAR

Annotated regions:
phrase: RIVLGVSGGIAAYKSAILVRRLKDAGFDVRVVMTQGALAFITPLTFQALSGNPVHTTLLDPAAEAGMGHIELARWADLILIAPASANTVARLAAGLSDDLLTTVVLASKAPVWLAPAMNQQMWANALTQRNLQTLTDYGMQVIQPDAGEQACGDVGLGRMPEPEALALQV
type: DOMAIN
name: Flavoprotein
description: Flavoprotein

phrase: LAGQHVVITAGPTREAIDPVRYVSNHSTGKMGFALAEACRDAGARVTLIAGPVTLPTPQGIERIDIGSAQELLAVCLKVVNQGCDIFIATAAVADYRAAEVSPQKIKKAGEQLTIQLVKNPDIVATVAQQEKRPFMVGFAAETQHMEQYASSKLVSKKLDMIAVNDVSRSDIGFGSDHNAMT
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal
Protein sequence:
MEGESVKLSSQTLIQAGDDEKNQRTITVNPAHMGKAFKVMNELRSKQLLCDVMIVAEDVEIEAHRVVLAACSPYFCAMFTGDMSESKAKKIEIKDVDGQTLSKLIDYIYTAEIEVTEENVQVLLPAASLLQLMDVRQNCCDFLQSQLHPTNCLGIRAFADVHTCTDLLQQANAYAEQHFPEVMLGEEFLSLSLDQVCSLISSDKLTVSSEEKVFEAVISWINYEKETRLEHMAKLMEHVRLPLLPRDYLVQTVEEEALIKNNNTCKDFLIEAMKYHLLPLDQRLLIKNPRTKPRTPVSLPKVMIVVGGQAPKAIRSVECYDFEEDRWDQIAELPSRRCRAGVVFMAGHVYAVGGFNGSLRVRTVDVYDGVKDQWTSIASMQERRSTLGAAVLNDLLYAVGGFDGSTGLASVEAYSYKTNEWFFVAPMNTRRSSVGVGVVEGKLYAVGGYDGASRQCLSTVEQYNPATNEWIYVADMSTRRSGAGVGVLSGQLYATGGHDGPLVRKSVEVYDPGTNTWKQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPVTDKWTLLPTNMSTGRSYAGVAVIHKSL

Annotated regions:
phrase: CLGIRAFADVHTCTDLLQQANAYAEQHFPEVMLGEEFLSLSLDQVCSLISSDKLTVSSEEKVFEAVISWINYEKETRLEHMAKLMEHVRLPLLPRDYLVQTV
type: DOMAIN
name: BACK
description: BTB/Kelch-associated

phrase: LHPTNCLGIRAFADVHTCTDLLQQANAYAEQHFPEVMLGEEFLSLSLDQVCSLISSDKLTVSSEEKVFEAVISWINYEKETRLEHMAKLMEHVRLPLLPRDYLVQTVEEEALIKNNNTCKDFLIEAMKY
type: DOMAIN
name: KLHL3_BACK
description: Kelch-like protein 3, BACK domain

phrase: PRTPVSLPKVMIVVGGQAPKAIRSVECYDFEEDRWDQIAEL
type: REPEAT
name: Kelch_1
description: Kelch repeat type 1

phrase: CRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPVTDKWTLLPT
type: REPEAT
name: Kelch_1
description: Kelch repeat type 1

phrase: RRSSVGVGVVEGKLYAVGGYDGASRQCLSTVEQYNPATNEWIYVADM
type: REPEAT
name: Kelch_1
description: Kelch repeat type 1

phrase: RRSTLGAAVLNDLLYAVGGFDGSTGLASVEAYSYKTNEWFFVAPM
type: REPEAT
name: Kelch_1
description: Kelch repeat type 1

phrase: RRCRAGVVFMAGHVYAVGGFNGSLRVRTVDVYDGVKDQWTSIASM
type: REPEAT
name: Kelch_1
description: Kelch repeat type 1

phrase: RRSGAGVGVLSGQLYATGGHDGPLVRKSVEVYDPGTNTWKQVADM
type: REPEAT
name: Kelch_1
description: Kelch repeat type 1

phrase: MNELRSKQLLCDVMIVAEDVEIEAHRVVLAACSPYFCAMFTGDMSESKAKKIEIKDVDGQTLSKLIDYIYTAEIEVTEENVQVLLPAASLLQLMDVRQNCCDFLQS
type: DOMAIN
name: BTB/POZ_dom
description: BTB/POZ domain

phrase: CDVMIVAEDVEIEAHRVVLAACSPYFCAMFTGDMSESKAKKIEIKDVDGQTLSKLIDYIYTAEIEVTEENVQVLLPAASLLQLMDVRQNCCDFLQSQ
type: DOMAIN
name: BTB/POZ_dom
description: BTB/POZ domain

phrase: CDVMIVAEDVEIEAHRVVLAACSPYFCAMFTGDMSESKAKKIEIKDVDGQTLSKLIDYIYTAEIEVT
type: DOMAIN
name: BTB/POZ_dom
description: BTB/POZ domain

phrase: CLGIRAFADVHTCTDLLQQANAYAEQHFPEVMLGEEFLSLSLDQVCSLISSDKLTVSSEEKVFEAVISWINYEKETRLEHMAKLMEHVRLPLLPRDYLVQTV
type: DOMAIN
name: BACK
description: BTB/Kelch-associated

phrase: LLYAVGGFDGSTGLASVEAYSYKTNEWFFVAPMNTRRSSVGVGVVE
type: REPEAT
name: Kelch_1
description: Kelch repeat type 1

phrase: KLYAVGGYDGASRQCLSTVEQYNPATNEWIYVADMSTRRSGAGVGVLS
type: REPEAT
name: Kelch_1
description: Kelch repeat type 1

phrase: LLYVVGGDDGSCNLASVEYYNPVTDKWTLLPTNMSTGRSYAGVAVIH
type: REPEAT
name: Kelch_1
description: Kelch repeat type 1

phrase: QLYATGGHDGPLVRKSVEVYDPGTNTWKQVADMNMCRRNAGVCAVN
type: REPEAT
name: Kelch_1
description: Kelch repeat type 1

phrase: HVYAVGGFNGSLRVRTVDVYDGVKDQWTSIASMQERRSTLGAAVLN
type: REPEAT
name: Kelch_1
description: Kelch repeat type 1

phrase: VMIVVGGQAPKAIRSVECYDFEEDRWDQIAELPSRRCRAGVVFMA
type: REPEAT
name: Kelch_1
description: Kelch repeat type 1
Protein sequence:
MGPRKKSVKTCIMNNEIPEEMTADETKDYMNQLSHEVLCHIFRYLPLQDIMCMECLSRKLKEAVTLYLRVVRVVDLCAGRWWEYMPSGFTDASFLTLLKKMPDVEQLYGLHPRYLERRRVRGHEAFSIPGVLEALQACPNLVGVETSHLELVESIWTYMPHVHILGKFRNRNGAFPIPPENKLKIPIGAKIQTLHLVGVNVPEIPCIPMLRHLYMKWVRLTKPQPFKDFLCISLRTFVMRNCAGPTNSLKYVPLVTGLASARNLEHLEMVRVPFLGGLIQHVVEDSWRSGGFRNLHTIVLGACKNALEVDLGYLIITAARRLHEVRIQPSLTKDGVFSALKMAELEFPQFETLHLGYVDEFLLQSRMANADLVKYGLADVVENPGIITDIGMKAVNEVFSCIKYLAIYNCPHLHNPYNWISDHSRWTRLVDINLVRCHALKLDSFGQFIELLPSLEFISLDQMFREPPKGCARVGLSAGTGIGVSSALVSNQNSNNDDNNAQNNNANIHDNNHHHPDDSDEENDFRQDLQPGEQQFAADALNEMEDIVQEDGEVVAESGNNTPAHSQAIIPVDVDEEQAGPSGLQRVVKPTSITVHDSESDDEEDSLELQEVWIPKNGTRRYSEREEKTGESVQSRELSVSGKGKTPLRKRYNSHQMGQSKQFPLEESSCEKGCQVTSEQIKADMKAARDIPEKKKNKDVYPSCSSTTASTVGNSSSHNTASQSPDFVRTVNSGGSSEPSPTEVDVSRQCACSPGGSEDSEAMEEGDAESSVCPRCCCHRPQESQRRTSRCSDEERPSTSRACVVNGPDGTRSAFSFRTLPQGGSSGPAHDERTNGSGSGATGEDRRGSSQPESCDVQSNEDYPRRPLTRARSRLSHVLLVSESEVAKTKPRHAMKRKRTADKSTSTSDPVIEDDHVQVLVLKSKNLVGVTMTNCGITDLVLKDCPKMMFIHATRCRVLKHLKVENAPIVNRFDYAQCKKLNMDQVLDQILRMPPERNRIIYLRPMQQVDTLTLEQKLFSGPYPYHICIIHEFSNPPNVRNKVRIRSWMDTIANINQELIKYEFFPEATRSEEDLKKYPKYPWGREIYTLEGVVDGAPYSMISDFPWLRSLRAAEPNSFARYDFEDDEESTIYAPRRKGQLSADICMETIGEEISEMRQMKKGVFQRVVAIFIHYCDVNGEPVEDDYI

Annotated regions:
phrase: QLSHEVLCHIFRYLPLQDIMCMECLSRKLKEAV
type: DOMAIN
name: F-box_dom
description: F-box domain
Protein sequence:
MSLEISGRELIKSKIIDAPECSGVYKMLDVSKQVIYVGKAKILKKRLTNYIKSDLDNKTLRMIANTYFLEYIITHSEVEALLLEAQLIKKFQPKFNILLKDDKSFPFIKLSLDHDFPQLLKYRGKALSDGKLFGPFASNTQVNTTLTELQKIFKLRSCTDNYFNSRTRPCLQYEIKRCYAPCVGKINKENYRVLVIQVKDFLQCRTRELQENLSKKMQELSSQMRFEEAAEIRDRIKALSYVQLKSRILDVVKNADIISIVHKDLHYCIEVALYRAGQPYGNIPYFFSSTENSTHEEVLEYFLLQFYQKQQVPSEIIMNHEINSKENVIEAIKKINNISDLSIIVPHKGDKAKLVHKAEVNALFSLEQYLKKITKNTEIMFEVKKLFDLPEIPERIEIYDNSHIQGMFAVGVMVVAGKIGFDKKEYRVFSLSSRNFTIGSEIELRDDIKGDDYGMLRQVLTRRFTRLKNEPNKLPSLMIIDGGKGHLTVVKEVMDKFGMNIPFVCMSKGRDRNAGLEQLHMQGKEVFTLDKNLLVMKYLQILRDEAHNFAIKNHRLGRSRAIKISSLDDIDGVGEARKTALLHYFGSYKAVCNATIDELAKVKGISKSLASMIFNVLNRKISLDNS

Annotated regions:
phrase: SSLDDIDGVGEARKTALLH
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: DELAKVKGISKSLASMIFN
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: IISIVHKDLHYCIEVALYRAGQPYGNIPYFFSSTENSTHEEVLEYFLLQFYQKQQVPSEIIMNHEINSKENVIEAIKKINNISDLSIIVPHKGDKAKLVHKAEVNALFSLEQYLKKITKNTEIMFEVKKLFDLPEIPERIEIYDNSHIQGMFAVGVMVVAGKIGFDKKEYRVFSLSSRNFTIGSEIELRDDIKGDDYGMLRQVLTRRFTRLKNEPNKLPSLMIIDGGKGHLTVVKEV
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: ELQENLSKKMQELSSQMRFEEAAEIRDRIKAL
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: CSGVYKMLDVSKQVIYVGKAKILKKRLTNYIKSDLDNKTLRMIANTYFLEYIITHSEVEALLLEAQLIKKFQPKFNILLK
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: KKLFDLPEIPERIEIYDNSHIQGMFAVGVMVVAGKIGFDKKEYRVFSLSSRNFTIGSEIELRDDIKGDDYGMLRQVLTRRFTRLKNEPNKLPSLMIIDGGKGHLTVVKEVMDKFGMNIPFVCMSKGRDRNAGLEQLHMQGKEVFTLDKNLLVMKYLQILRDEAHNFA
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: RELQENLSKKMQELSSQMRFEEAAEIRDRIKALSY
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: SGVYKMLDVSKQVIYVGKAKILKKRLTNYIKSDLDNKTLRMIANTYFLEYIITHSEVEALLLEAQLIKKFQPKF
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: ECSGVYKMLDVSKQVIYVGKAKILKKRLTNYIKSDLDNKTLRMIANTYFLEYIITHSEVEALLLEAQLIKKFQPKFN
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: APECSGVYKMLDVSKQVIYVGKAKILKKRLTNYIKSDLDNKTLRMIANTYFLEYIITHSEVEALLLEAQLIKKFQPKFN
type: DOMAIN
name: GIY-YIG_UvrC_Cho
description: UvrC/Cho-like, GIY-YIG domain
Protein sequence:
MAVVKCKPTSPGRRHVVKVVNPELHKGKPFAPLLEKNSKSGGRNNNGRITTRHIGGGHKQAYRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDGERRYILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVARDGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGRNFGKHPVTPWGVQTKGKKTRSNKRTDKFIVRRRSK

Annotated regions:
phrase: IKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVARDGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGRNFGKHPVTPWGV
type: DOMAIN
name: Ribosomal_uL2_C
description: Large ribosomal subunit protein uL2, C-terminal

phrase: KPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGTYVQIVARDGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARWRGVRPTVRGTAMNPVDHPHGGGEGRNFGKHPVTPW
type: DOMAIN
name: Ribosomal_uL2_C
description: Large ribosomal subunit protein uL2, C-terminal

phrase: PTVRGTAMNPV
type: CONSERVED_SITE
name: Ribosomal_uL2_CS
description: Large ribosomal subunit protein uL2, conserved site

phrase: GRNNNGRITTRHIGGGHKQAYRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDGERRYILAPKGLKAGDQI
type: DOMAIN
name: Ribosomal_uL2_RNA-bd_dom
description: Large ribosomal subunit protein uL2, RNA-binding domain
Protein sequence:
MKSSYNLRSIAAKVVGQVLDQGQSLSALLPIHQRDVSDKDRALLQELCFGVLRVLPQLEWCIQQLMAKPLTGKQRTLHYLIMVGIYQLHYTRIPPHAALAETVEGAVALKRPQLKGLINGVLRQFQRQQEELLQREATHSSHYLHPSWLLARIEHAYPNNWRGIVEANNQRPPMWLRVNRLHHTREAYLNLLMQGGIEAFPHTEYSDAIRLASPCAVDQLPGFSQGWATVQDASAQGCVYWLDPQDGEQILDLCAAPGGKTTHILEAAPKSHVLAVDVDETRLGRVKENLLRLQMHAEVKQGDGRYPDSWCEARVFDRILLDAPCSATGVIRRHPDIKWLRRDRDIEELVALQKEILDAIWPHLKTGGTMVYATCSILPQENTQQVTGFLSRHADAALVDTGTSEIPGIQILPHADSGDGFFYAKLVKN

Annotated regions:
phrase: NLRSIAAKVVGQVLDQGQSLSALLPIHQRDVSDKDRALLQELCFGVLRVLPQLEWCIQQLMAKPLTGKQRTLHYLIMVGIYQLHYTRIPPHAALAETVEGAVALKRPQLKGLINGVLRQFQRQ
type: DOMAIN
name: RsmB-like_N
description: Ribosomal RNA small subunit methyltransferase B-like, N-terminal domain

phrase: LRSIAAKVVGQVLDQGQSLSALLPIHQRDVSDKDRALLQELCFGVLRVLPQLEWCIQQLMAKPLTGKQRTLHYLIMVGIYQLHYTRIPPHAALAETVEGAVALKRPQLKGLINGVLRQFQ
type: DOMAIN
name: NusB_RsmB_TIM44
description: NusB/RsmB/TIM44

phrase: FDRILLDAPCS
type: CONSERVED_SITE
name: RsmB/NOL1/NOP2-like_CS
description: RsmB/NOL1/NOP2-like, conserved site

phrase: YWLDPQDGEQILDLCAAPGGKTTHILEAAPKSHVLAVDVDETRLGRVKENLLRLQMHAEVKQGDGRYPDSWCEARVFDRILLDAPCSATGVIRRHPDIKWLRRDRDIEELVALQKEILDAIWPHLKTGGTMVYATCSILPQENTQQVTGFLSRHADAALVDTGTSEIPGIQILPHADSGDGFFYAK
type: DOMAIN
name: MeTrfase_RsmB-F_NOP2_cat
description: SAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic core

phrase: IVEANNQRPPMWLRVNRLHHTREAYLNLLMQGGIEAFPHTEYSDAIRLASPCAVDQLPGFSQGWATVQDASAQGCVYWLDPQDGEQILDLCAAPGGKTTHILEAAPKSHVLAVDVDETRLGRVKENLLRLQMHAEVKQGDGRYPDSWCEARVFDRILLDAPCSATGVIRRHPDIKWLRRDRDIEELVALQKEILDAIWPHLKTGGTMVYATCSILPQENTQQVTGFLSRHADAALVDTGTSEIPGIQILPHADSGDGFFYAKLVK
type: DOMAIN
name: MeTrfase_RsmB-F_NOP2_dom
description: SAM-dependent methyltransferase RsmB-F/NOP2-type domain

phrase: HPSWLLARIEHAYPNNWRGIVEANNQRPPMWLRVNRLHHTREAYLNLLMQGGIEAFPHTEYSDAIRLASPCAV
type: DOMAIN
name: RsmB-like_ferredoxin
description: Ribosomal RNA small subunit methyltransferase B-like, ferredoxin-like domain
Protein sequence:
MRLGFLMLLPLLLLPLLRPWGVTRALSYDPTWESLDRRPLPAWFDQAKFGIFIHWGVFSVPSFGSEWFWWYWQKEKKPQFVDFMNNNYAPGFKYEDFVVLFTAKYFNANQWADILQASGAKYVVFTSKHHEGFTMWGSDRSWNWNAVDEGPKRDIVKELEVAVRNRTGLHFGLYYSLFEWFHPLFLEDQSSSFQKQRFPVSKTLPELYELVNRYQPEVLWSDGDGGAPDHYWNSTGFLAWLYNESPVRKTVVTNDRWGVGSICKHGGYYTCSDRYNPGYLLPHKWENCMTIDKFSWGYRREAEISDYLTIEELVKKLVETVACGGNLLMNIGPTGDGTIPVIFEERLRQMGTWLKVNGEAIYETHTWRSQNDTVTPDVWYTSKPEKKLVYAIFLKWPISGKLFLGQPIGSLGETEVELLGHWQPLTWTSSQPSGITVELPLLSVHQMPCKWGWTLVLSNVI

Annotated regions:
phrase: QNDTVTPDVWYTSKPEKKLVYAIFLKWPISGKLFLGQPIGSLGETEVELLGHWQPLTWTSSQPSGITVELPLLSVHQMPCKWGWTLV
type: DOMAIN
name: Fucosidase_C
description: Alpha-L-fucosidase, C-terminal

phrase: PGYLLPHKWEN
type: CONSERVED_SITE
name: Glyco_hydro_29_CS
description: Glycoside hydrolase, family 29, conserved site
Protein sequence:
MPKLGMQSIRRRQLIDATLEAINEVGMHDATIAQIARRAGVSTGIISHYFRDKNGLLEATMRDITSQLRDAVLNRLHALPQGSAELRLQAIVGGNFDETQVSSAAMKAWLAFWASSMHQPMLYRLQQVSSRRLLSNLVSEFRRELPRQQAQEAGYGLAALIDGLWLRAALSGKPLDKPLAHSLTRHFITQHLSTD

Annotated regions:
phrase: RLQAIVGGNFDETQVSSAAMKAWLAFWASSMHQPMLYRLQQVSSRRLLSNLVSEFRRELPRQQAQEAGYGLAALIDGLWLRAALSGKPLDKPLAHSLTRHFITQH
type: DOMAIN
name: BetI_C
description: BetI-type transcriptional repressor, C-terminal

phrase: LIDATLEAINEVGMHDATIAQIARRAGVSTGIISHYFRDKNGLLE
type: DOMAIN
name: HTH_TetR
description: DNA-binding HTH domain, TetR-type

phrase: SIRRRQLIDATLEAINEVGMHDATIAQIARRAGVSTGIISHYFRDKNGLLEATMRDITSQ
type: DOMAIN
name: HTH_TetR
description: DNA-binding HTH domain, TetR-type

phrase: GMHDATIAQIARRAGVSTGIISHYFRDKNGL
type: CONSERVED_SITE
name: DNA-bd_HTH_TetR-type_CS
description: DNA-binding HTH domain, TetR-type, conserved site

phrase: LIDATLEAINEVG
type: DOMAIN
name: HTH_TetR
description: DNA-binding HTH domain, TetR-type

phrase: IARRAGVSTGIISHYFRDKNGLL
type: DOMAIN
name: HTH_TetR
description: DNA-binding HTH domain, TetR-type
Protein sequence:
MSSHIQIFDTTLRDGEQTPGVNFTFDERLRIALQLEKWGVDVIEAGFPASSTGSFKSVQAIAQTLTTTAVCGLARCKKSDIDAVYEATKDAAKPVVHVFIATSPIHLEHKLKMSQEDVLASIKEHVTYAKQLFDVVQFSPEDATRTELPFLVKCVQTAVDAGATVINIPDTVGYSYHDEYAHIFKTLTESATSSNEIIYSAHCHDDLGMAVSNSLAAIEGGARRIEGTVNGIGERAGNAALEEVALALYVRNDHYGAQTALNLEETKKTSDLISRYAGIRVPRNKAIVGQNAFSHESGIHQDGVLKHRETYEIMTPQLVGVSMTELPLGKLSGKHAFSEKLKALGYDIDKEAQIDLFKQFKAIADKKKSVSDRDIHAIIQGSEHEHQALYKLETLQLQYVSSGLQSAVVVVKDKEGHIYQDSSIGTGSIVAIYNAVDRIFQKETELIDYRINSVTEGTDAQAEVHVNLLIEGKTVNGFGIDHDILQASCKAYVEAHAKFAAENVEKVGN

Annotated regions:
phrase: VSDRDIHAIIQGSEHEHQALYKLETLQLQYVSSGLQSAVVVVKDKEGHIYQDSSIGTGSIVAIYNAVDRIFQKETELIDYRINSVTEGTDAQAEVHVNLLIEGKTVNGFGIDHDILQASCKAYVEAHA
type: DOMAIN
name: 2-isopropylmalate_synth_dimer
description: 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain

phrase: IQIFDTTLRDGEQTPGVNFTFDERLRIALQLEKWGVDVIEAGFPASSTGSFKSVQAIAQTLTTTAVCGLARCKKSDIDAVYEATKDAAKPVVHVFIATSPIHLEHKLKMSQEDVLASIKEHVTYAKQLFDVVQFSPEDATRTELPFLVKCVQTAVDAGATVINIPDTVGYSYHDEYAHIFKTLTESATSSNEIIYSAHCHDDLGMAVSNSLAAIEGGARRIEGTVNGIGERAGNAALEEVALALYVRNDHYGAQTALNLEET
type: DOMAIN
name: PYR_CT
description: Pyruvate carboxyltransferase

phrase: SVSDRDIHAIIQGSEHEHQALYKLETLQLQYVSSGLQSAVVVVKDKEGHIYQDSSIGTGSIVAIYNAVDRIFQKETELIDYRINSVTEGTDAQAEVHVNLLIEGKTVNGFGIDHDILQASCKAYVEAHAKF
type: DOMAIN
name: 2-isopropylmalate_synth_dimer
description: 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain

phrase: IQIFDTTLRDGEQTPGVNFTFDERLRIALQLEKWGVDVIEAGFPASSTGSFKSVQAIAQTLTTTAVCGLARCKKSDIDAVYEATKDAAKPVVHVFIATSPIHLEHKLKMSQEDVLASIKEHVTYAKQLFDVVQFSPEDATRTELPFLVKCVQTAVDAGATVINIPDTVGYSYHDEYAHIFKTLTESATSSNEIIYSAHCHDDLGMAVSNSLAAIEGGARRIEGTVNGIGERAGNAALEEVALALYVRNDHYGAQTALNLEETKKTSDL
type: DOMAIN
name: PYR_CT
description: Pyruvate carboxyltransferase

phrase: IVGQNAFSHESGIHQDGVLKHRETYEIMTPQLVGVSMTELPLGKLSGKHAFSEKLKALGYDIDKEAQIDLFKQFKAIADKK
type: DOMAIN
name: LeuA/HCS_post-cat
description: 2-isopropylmalate synthase/homocitrate synthase, post-catalytic domain
Protein sequence:
MEQTLRWFGPNDPVSLQDIAQTGATGIVTALHHIPNGEVWSIDEIIKRKVEIEHQDGDPKKGASGLTWSVVESIPVHEDIKKQTGNYIQYIENYKESIRNLALCGIKCVCYNFMPVLDWSRTDLSYTVEDGSKALRFDINAFAAFELFILKRPGAENEYSDEQKQKAKSYFEAMTAEDKVKLQQNILAGLPGAEEAYTVEDFLVTLSAYNHIDRQALKNNLFHFLKEIVPVAESKGVLMAIHPDDPPYPILGLPRVVSTEEDLIELMNAAPSKSNGFTMCTGSYGVRADNDLPGIVRRHGDKMNFIHLRSTQRDEEGSFYEANHLEGDVDMYEVVKAILEVEKRNNSKLPMRPDHGHQMLDDLKKKTNPGYSAIGRLRGLAELRGLELGIKRSL

Annotated regions:
Protein sequence:
MAGVPAVRISIESACEKQVQEVGLDGSETYLQPLSMSQNLARLAQRIDFSQGSGSEEDEPGSAGRAWAEPSEAEDEEGLVKFQPSLWPWDSVRNNLRSALTEMCVLYDVLSIVKDKKFMTLDPVVQDPPPPKQDPQFLQLISKKKSLAGAAQILLKGAERLSKSVAENQENKRQRDFNSELLRLRQHWKLRKVGDKILGDLSYRSAGSLFLHHGTFEVIKNTDIDLDKKIPEDYCPLDVQIPSDLEGSAYIKVSIQKQAPDIGDLGTVNLFKRPMPKSKPGTPHWQTKLETAQNVLLCKEIFAQLSREAVQIKSQIPHIVVKNQIISQPFPGLQLSISLCHSSNDKKSQKSASEKQNPEGHLYVLEHNLHQLIRECHKQTLSSVVMPHPASAPFGHKRMRLAGPQAFDKNEISSLQTNEGLLEKIIKQAKHIFLRRRTARTIDSLASRIEDPQIQAHWSNINDVYESSVKVLITSQGYEQICKSIQLQLNIGVEQIRVVHRDGRVITLSHQEQELQDFLLSQMSQHQVHAVQQLAKVMGWHVLSFSNHVGLGPVESIGNASAITVASPNGDYAISVRNGPESGSKVMVQFPRSQCKDLPKGDVLQDNKWNHLRGPFKEVQWNKMEGRNFVYKMELLMAALTPC

Annotated regions:
Protein sequence:
MASQTAVTARSAYRQILRATRIAFQDDFRVLVAARQEARRQFDEHRREGIDTPMQINHAKEVAAILRHNIVQGVRDSNDENGKWELRIHDDIERGDNDSIRVGGKKVKVDKPCSA

Annotated regions:
phrase: ARSAYRQILRATRIAFQDDFRVLVAARQEARRQFDEHRREGIDTPMQINHAKEVAAILRHNIVQGVRDS
type: DOMAIN
name: Complex1_LYR_LYRM7
description: LYRM7, LYR domain
Protein sequence:
MQTIYTKITDIKGNLITVEAEGARLGELAEIERVDGRSSYASVLRFDAKKVTLQVFGGTSGLSTGDRVIFLGRSMEVTYGESLIGRRLNGVGKPIDGEGECFGDPIAISTPTFNPVCRVVPRDMVKTNIPMIDVFNCLVKSQKIPIFSSSGESHNALLMRIAAQTDADIVIIGGMGLTFVDYSFFVDESKRLGFADKCVMFIHKAVDAPVECVLIPDMALACAEKFAVDHNKNVLVLLTDMTAFADALKEIAITMDQIPANRGYPGSLYSDLALRYEKAVDIAEGGSITLISVTTMPGDDITHPVPDNTGFITEGQFYLKNNRIDPFGSLSRLKQLVIGKVTREDHGDLANSLIRLYADSRKAAERMSMGFKLSNWDKKLLAFAELFETRLMSLEVNIPLEEALDIGWKILAQSFHSEEVGIKEQLINKYWPKSCLHR

Annotated regions:
phrase: IPMIDVFNCLVKSQKIPIFSSSGESHNALLMRIAAQTDADIVIIGGMGLTFVDYSFFVDESKRLGFADKCVMFIHKAVDAPVECVLIPDMALACAEKFAVDHNKNVLVLLTDMTAFADALKEIAITMDQIPANRGYPGSLYSDLALRYEKAVDIAEGGSITLISVTTMPGDDITHPVPDNTGFITEGQFYLKN
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_nucl-bd
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain

phrase: KVTREDHGDLANSLIRLYADSRKAAERMSMGFKLSNWDKKLLAFAELFETRLMSLEVNIPLEEALDIGWKILAQSFHSEEVGIKEQLINKY
type: DOMAIN
name: ATP-synt_VA_C
description: ATP synthase A/B type, C-terminal domain

phrase: ITDIKGNLITVEAEGARLGELAEIERVDGRSSYASVLRFDAKKVTLQVFGGTSGLSTGDRVIFL
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_N
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain
Protein sequence:
MTTQFSVAGVELELLRYPAQQESNLQAWDAADEHLLKSLIESEQAAVPTAIINDSFGALSCGVSKLNPSWPLCVETDARTSFLGTEQNHGRNQLPLDNLQWFTSRDTLPENLALVLMKLPKNLSYFAHQLTRLSQVLPAGTRVLVAAKAKSINGALLDIFAKHLGPASASLAWKNTRVITCVSDGKPRPLAKEVTWTVPEYQLEISNLSNVFAANKLDIGARIMLENLPKGDFKSIVDLGCGNGVLGLRTAQLFPEADIHFIDDSEMAVASAKANWARNQLPADKGHFYWDDCMTHLPEEVQPDLVLCNPPFHQGEAITDHIAWQMFLDARRRLKDGGILHIVGNRHLAYHVKLQRLFKNCTTVASNGKFVILQAQKK

Annotated regions:
phrase: LEISNLSNVFAANKLDIGARIMLENLPKGDFKSIVDLGCGNGVLGLRTAQLFPEADIHFIDDSEMAVASAKANWARNQLPADKGHFYWDDCMTHLPEEVQPDLVLCNPPFHQGEAITDHIAWQMFLDARRRLKDGGILHIVGNRHLAYHVKLQRLFKNCTTVASNGKFVIL
type: DOMAIN
name: Small_mtfrase_dom
description: Methyltransferase small domain

phrase: VLCNPP
type: CONSERVED_SITE
name: DNA_methylase_N6_adenine_CS
description: DNA methylase, N-6 adenine-specific, conserved site