nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQEFEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAAYERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWVVLDKSVASFDEIPAEVQEEIKAELLKWIVSGEDTIAYSSESSYAANLEMATNEYKPSNRVIAEEEVIRVATPDVKSIDEVAAFLNVPEEQTIKTLFYIADGELVAALLVGNDQLNEVKLKNHLGADFFDVASEEEVANVVQAGFGSLGPVGLPENIKIIADRKVQDVRNAVVGANEDGYHLTGVNPGRDFTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLITVNVKDEEAQALTEKLEASLMGAGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKKAADGIVEVKIKATGDTIEVHADNVLETLEILSKK

Annotated regions:
phrase: DVHLITVNVKDEEAQALTEKLEASLMGAGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKKAADGIVEVKIKATGDTIEVHADNVLET
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: YKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAAYERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWVVLDKSVASFDEIPAEVQEEIKAELLKWIVSGEDTIAYSSESSYAANLEMATNEYKPSNRVIAEEEVIRVATPDVKSIDEVAAFLNVPEEQTIKTLFYIADGELVAALLVGNDQLNEVKLKNHLGADFFDVASEEEVANVVQAGFGSLGPVGLPENIKIIADRKVQDVRNAVVGANEDGYHLTGVNPGRDFTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQ
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: PFDVHLITVNVKDEEAQALTEKLEASLMGAGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKKAADGIVEVKIKATGDTIEVHADNVLETL
type: DOMAIN
name: ProRS_anticodon_short
description: Proline--tRNA ligase, anticodon binding domain

phrase: RQVSAGVYSYLPLANRVIEKAKNIMRQEFEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAAYERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWVVLDKSVASFDEIPAEVQEEIKAELLKWIVSGEDTIAYSSESSYAANLEMATNEYKPSNRVIAEEEVIRVATPDVKSIDEVAAFLNVPEEQTIKTLFYIADGELVAALLVGNDQLNEVKLKNHLGADFFDVASEEEVANVVQAGFGSLGPVGLPENIKIIADRKVQDVRNAVVGANEDGYHLTGVNPGRDFTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVNKT
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: DAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQEFEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAAYERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAIT
type: DOMAIN
name: ProRS_core_prok
description: Prokaryote proline-tRNA ligase core domain

phrase: TPDVKSIDEVAAFLNVPEEQTIKTLFYIADGELVAALLVGNDQLNEVKLKNHLGADFFDVASEEEVANVVQAGFGSLGPVGLPENIKIIADRKVQDVRNAVVGANEDGYHLTGVN
type: DOMAIN
name: YbaK/aa-tRNA-synth-assoc-dom
description: YbaK/aminoacyl-tRNA synthetase-associated domain
Protein sequence:
MSKKLHIKTWGCQMNEYDSSKMADLLGEYQGYTLTEEAEEADILLLNTCSIREKAQEKVFHQLGRWKTLKDKNPDLIIGVGGCVASQEGKAIKDRAQCVDIIFGPQTLHRLPEMIDQVRSGEKAVIDVSFPEIEKFDRLPEPRAEGPTAFVSIMEGCSKYCSFCVVPYTRGEEVSRPMDDIILEIAQLAEQGVREVNLLGQNVNAYRGAKHDGEICTFAELLRHVAAIDGIDRLRFTTSHPIEFTQDIIDVYEDTPELVSFLHLPVQSGSDRILTAMKRGHMAIEYKSIIRRLRKARPDIQISSDFIVGFPGETAQDFQDTMKLIEDVNFDMSFSFIYSARPGTPAADLPDDVDMEEKKQRLADLQELINQQAMRYSRQMMGTVQRILVEGPSVKNPMELRGRTETNRVVNFEGLHKHIGTFVDVEIVDVFPNSLRGKFIRGEDEMDLRKSLRPEDILAKHQKADDLGVTHFKP

Annotated regions:
phrase: VSIMEGCSKYCSFCVVPYTR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: RAEGPTAFVSIMEGCSKYCSFCVVPYTRGEEVSRPMDDIILEIAQLAEQGVREVNLLGQNVNAYRGAKHDGEICTFAELLRHVAAIDGIDRLRFTTSHPIEFTQDIIDVYEDTPELVSFLHLPVQSGSDRILTAMKRGHMAIEYKSIIRRLRKARPDIQISSDFIVGFPGETAQDFQDTMKLIEDVNFDMSFSFIYSARPGTPAADLPDDVDMEEKKQRLADLQELINQQAM
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: RQMMGTVQRILVEGPSVKNPMELRGRTETNRVVNFEGLHKHIGTFVDVEIVDVFPNSLRGKFI
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: KLHIKTWGCQMNEYDSSKMADLLGEYQGYTLTEEAEEADILLLNTCSIREKAQEKVFHQLGRWKTLKDKNPDLIIGVGGCVASQEGKAIKDRAQCVDIIF
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: VSIMEGCSKYCSFCVVPYTRGEEVSRPMDDIILEIAQLAEQGVREVNLLGQNVNAYRGAKHDGEICTFAELLRHVAAIDGIDRLRFTTSHPIEFTQDIIDVYEDTPELVSFLHLPVQSGSDRILTAMKRGHMAIEYKSIIRRLRKARPDIQISSDFIVGFPGETAQDFQDTMKL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SKKLHIKTWGCQMNEYDSSKMADLLGEYQGYTLTEEAEEADILLLNTCSIREKAQEKVFHQLGRWKTLKDKNPDLIIGVGGCVASQEGKAIKDRAQCVDIIFGPQTLHRLPEMIDQVRSGEKAVIDVSFPEIEKFDRLPEPRAEGPTAFVSIMEGCSKYCSFCVVPYTRGEEVSRPMDDIILEIAQLAEQGVREVNLLGQNVNAYRGAKHDGEICTFAELLRHVAAIDGIDRLRFTTSHPIEFTQDIIDVYEDTPELVSFLHLPVQSGSDRILTAMKRGHMAIEYKSIIRRLRKARPDIQISSDFIVGFPGETAQDFQDTMKLIEDVNFDMSFSFIYSARPGTPAADLPDDVDMEEKKQRLADLQELINQQAMRYSRQMMGTVQRILVEGPSVKNPMELRGRTETNRVVNFEGLHKHIGTFVDVEIVDVFPNSLRGKFI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: RQMMGTVQRILVEGPSVKNPMELRGRTETNRVVNFEGLHKHIGTFVDVEIVDVFPNSLRGK
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: PTAFVSIMEGCSKYCSFCVVPYTRGEEVSRPMDDIILEIAQLAEQGVREVNLLGQNVNAYRGAKHDGEICTFAELLRHVAAIDGIDRLRFTTSHPIEFTQDIIDVYEDTPELVSFLHLPVQSGSDRILTAMKRGHMAIEYKSIIRRLRKARPDIQISSDFIVGFPGETAQDFQDTMKLIEDVNFDMSFSFIYSARPGTPAADLPDDVDMEEKKQRLADLQ
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: KKLHIKTWGCQMNEYDSSKMADLLGEYQGYTLTEEAEEADILLLNTCSIREKAQEKVFHQLGRWKTLKDKNPDLIIGVGGCVASQEGKAIKDRAQCVDIIFGPQTLHRLPEMIDQVR
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal
Protein sequence:
MSHPVMHTDFPGLKLLARGKVRDIYDLGETLLLVTSDRISAFDVIMNEPIPDKGFVLTEISSFWFRQMEDIVSNHIISTDVDEFPAACRPHADLLRGRSMLVKKARPLPVECIVRGYVSGSGWKEYQSSGSICGISLPPGLRESDRLPEPIFTPSTKAELGTHDENISFERMTELCGRELAEQARDYTLKIYGRARELADQKGIIIADTKFEFGVFEGELIIIDECMTPDSSRFWLKDDYRPGGPQPSFDKQFLRDYLEGLDWNKTAPAPALPAEIIAKTAQMYREALSRITGISL

Annotated regions:
phrase: LKLLARGKVRDIYDLGETLLLVTSDRISAFDVIMNEPIPDKGFVLTEISSFWFRQMEDIVSNHIISTDVDEFPAACRPHADLLRGRSMLVKKARPLPVECIVRGYVSGSGWKEYQSSGSICGISLPPGLRESDRLPEPIFTPSTKAELGTHDENISFERMTELCGRELAEQARDYTLKIYGRARELADQKGIIIADTKFEFGVFEGELIIIDECMTPDSSRFWLKDDYRPGGPQPSFDKQFLRDYLEGLDWNKTAPAPALPAEIIAKTAQMYREALSRIT
type: DOMAIN
name: SAICAR_synt/ADE2_N
description: SAICAR synthetase/ADE2, N-terminal

phrase: IADTKFEF
type: CONSERVED_SITE
name: SAICAR_synthetase_CS
description: SAICAR synthetase, conserved site

phrase: LARGKVRDIYDLGETLLLVTSDRISAFDVIMNEPIPDKGFVLTEISSFWFRQMEDIVSNHIISTDVDEFPAACRPHADLLRGRSMLVKKARPLPVECIVRGYVSGSGWKEYQSSGSICGISLPPGLRESDRLPEPIFTPSTKAELGTHDENISFERMTELCGRELAEQARDYTLKIYGRARELADQKGIIIADTKFEFGVFEGELIIIDECMTPDSSRFWLKDDYRPGGPQPSFDKQFLRDYLEGLDWNKTA
type: DOMAIN
name: SAICAR_synt/ADE2_N
description: SAICAR synthetase/ADE2, N-terminal

phrase: PLPVECIVRGYVSG
type: CONSERVED_SITE
name: SAICAR_synthetase_CS
description: SAICAR synthetase, conserved site
Protein sequence:
MLHFVTGNEGKLREAREYLDDIEGVEYDYPEIQADDLETIAAYGARDAYEHVGDPVLVDDAGLFVDALSGFPGPFSAYVEDTLGIERVAELARREDSHRARFRATVAYCDGDRTETFEGSVRGRIVPPRGEGGFGYDPIFEHNERTFAEMSPEEKNAVSHRGRALASFSAWFAER

Annotated regions:
Protein sequence:
MKIIADENMPYVDALFGYLGKIEYVNGRTLTPKQVEDADVLLVRSVTKVNAELIKDAHKLKFVGSATIGTDHVDVDYLSLRNIYFTNAPGCNATAVGEYAFIAMLELAQRFGESLAGKVVGIVGAGNTGTAAAKCMQAYGLKVLLCDPIKALQGDTREFVSLDTIIEQADIISLHVPITKDGEHKTWYLFDEARLNKLKPNTWLLNCCRGEVIDNRALIKFKQQRDDVKLVLDVWEGEPNPMAELVALAEFATPHIAGYSLEGKARGTFMLYQKWCELLDFPVKKSLESLLPTFQFNQIVSQGDLTESQLLKLSRLVYDLRDDDVNFRGCFSTATGFDLMRKKHTYRREYSAISLTQSVDYLSDGKIDPSMLSALGFN

Annotated regions:
phrase: QRFGESLAGKVVGIVGAGNTGTAAAKCMQAYGLKVLLCDPIKALQGDTREFVSLDTIIEQADIISLHVPITKDGEHKTWYLFDEARLNKLKPNTWLLNCCRGEVIDNRALIKFKQQRDDVKLVLDVWEGEPNPMAELVALAEFATPHI
type: DOMAIN
name: D-isomer_DH_NAD-bd
description: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain

phrase: LLPTFQFNQIVSQGDLTESQLLKLSRLVYDLRDDDVNFRGCFSTATGFDLMRKKHTYRREYSAISLTQSVDYLSD
type: DOMAIN
name: Erythronate-4-P_DHase_dimer
description: Erythronate-4-phosphate dehydrogenase, dimerisation domain

phrase: LKPNTWLLNCCRGEVI
type: CONSERVED_SITE
name: D-isomer_DH_CS
description: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site

phrase: KIEYVNGRTLTPKQVEDADVLLVRSVTKVNAELIKDAHKLKFVGSATIGTDHVDVDYLSLRNIYFTNAPGCNATAVGEYAFIAMLEL
type: DOMAIN
name: D-isomer_2_OHA_DH_cat_dom
description: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
Protein sequence:
MTDLVVTGRGSAPVADLISSLTRDVADFPKPGIQFKDLTPLFADREAMAAVIDALADIAAGTDLVAGIESRGSLVAAALAARLGTGVLSIRKSGKLPPPVLTEEYDREYGAASMEIPADSLELRGRSVMIIDDVLATGGTLGAATRLLERTGARVTGAAVVVELTALRGREAIAPLRVHSLSRA

Annotated regions:
phrase: AMAAVIDALADIAAGTDLVAGIESRGSLVAAALAARLGTGVLSIRKSGKLPPPVLTEEYDREYGAASMEIPADSLELRGRSVMIIDDVLATGGTLGAATRLLERTGARVTGAAVVVELTALRGREAIA
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: EAMAAVIDALADIAAGTDLVAGIESRGSLVAAALAARLGTGVLSIRKSGKLPPPVLTEEYDREYGAASMEIPADSLELRGRSVMIIDDVLATGGTLGAATRLLERTGARVTGAAVVVELT
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain
Protein sequence:
MRKIKRNDEVIVIAGKDKGKRGKVVKVVGENRVLVSGVNTVKKHEKPNPMKGSTGGIVEQEAPIQVSNVAIYNSATGKADRVGFKLNEDGTKVRVFKSNSEAIDA

Annotated regions:
phrase: NDEVIVIAGKDKGKRGK
type: CONSERVED_SITE
name: Ribosomal_uL24_CS
description: Large ribosomal subunit protein uL24, conserved site

phrase: NDEVIVIAGKDKGKRGKVVKVVGENRVL
type: DOMAIN
name: KOW
description: KOW

phrase: KIKRNDEVIVIAGKDKGKRGKVVKVVG
type: DOMAIN
name: KOW
description: KOW

phrase: NDEVIVIAGKDKGKRGKVVKVVGENRVLVSGVNTVKKHEKPNPMKGSTGGIVEQEAPIQVSNVA
type: DOMAIN
name: Ribosomal_uL24_KOW
description: Large ribosomal subunit protein uL24, KOW domain
Protein sequence:
MVALSNALSRVFGSVAGYKFPSFIQKSINALYVKIFKIDLSEFEPLENYKSLNALFMRSLKKERPFDKAPNICIAPCDALITECAFLDNDSALQIKGMPYKAHELVGEINPLSPSFFYVNFYLSPKDYHHYHAPCDLEILEARYFAGKLLPVNKPSLHKNKNLFVGNERVALVAKDIQGNKLYFVAVGALNVGKMRFNFDKNIQTNAKARFMQTYSYNPPIKVKKGDNLGNFEMGSTIVLFIQNTAFKDLKEKSVKFGESIGEFHAN

Annotated regions:
Protein sequence:
MADNMTTTQIEVGPGATNATINFEAGILECYERFSWQRALDYPGQDRLHRLKRKLESRIKTHNKSEPENKRMSLEERKAIGVKMMKVLLFMDPSAGIEGFEPYCVKNPSTSKCPNYDWTDYPPTPGKYLDDIEEEPENVDHPIEVVLRDMNNKDARQKIKDEVNTQKEGKFRLTIKRDIRNVLSLRVLVNGTFLKHPNGDKSLSTLHRLNAYDQNGGLVAKLVATDDRTVEDEKDGHRILNSLFERFDEGHSKPIRAAETAVGVLSQFGQEHRLSPEEGDN

Annotated regions:
Protein sequence:
MLESSKVPALTRAIDILNLIARIGPCSAATIIDTLGIPKSTAYLLLNELRRQRFLSLDHQENFCLWTRLVELSGHALSKMDLRELARPRLTQLMDTTGLLCHLGIIDNGSAYYILKVESSATISVRSHEGKSLSLYRSGIGKCLLAWQPAAVQQSIIEGLVWEQATPTTITHPQQLHEELARIRRQGWSYDNGEDYADVRCVAAPVFNANNELTAAISVVGTRLQINEEYRDYLAGKAIACARDISRLLGWKSPFDLQAS

Annotated regions:
phrase: VPALTRAIDILNLIARIGPCSAATIIDTLGIPKSTAYLLLNELRRQRFLSLDHQENFCLWTRLVELSGHALSKMDLRELARPRLTQLM
type: DOMAIN
name: Tscrpt_reg_IclR_N
description: Transcription regulator IclR, N-terminal

phrase: ALTRAIDILNLIARIGPCSAATIIDTLGIPKSTAYLLLNELRRQRFLSL
type: DOMAIN
name: Tscrpt_reg_IclR_N
description: Transcription regulator IclR, N-terminal

phrase: VPALTRAIDILNLIARIGPCSAATIIDTLGIPKSTAYLLLNELRRQRFLSLDHQENFCLW
type: DOMAIN
name: Tscrpt_reg_IclR_N
description: Transcription regulator IclR, N-terminal

phrase: HALSKMDLRELARPRLTQLMDTTGLLCHLGIIDNGSAYYILKVESSATISVRSHEGKSLSLYRSGIGKCLLAWQPAAVQQSIIEGLVWEQATPTTITHPQQLHEELARIRRQGWSYDNGEDYADVRCVAAPVFNANNELTAAISVVGTRLQINEEYRDYLAGKAIACARDIS
type: DOMAIN
name: Tscrpt_reg_IclR_C
description: Transcription regulator IclR, C-terminal

phrase: RLVELSGHALSKMDLRELARPRLTQLMDTTGLLCHLGIIDNGSAYYILKVESSATISVRSHEGKSLSLYRSGIGKCLLAWQPAAVQQSIIEGLVWEQATPTTITHPQQLHEELARIRRQGWSYDNGEDYADVRCVAAPVFNANNELTAAISVVGTRLQINEEYRDYLAGKAIACARDISRLLG
type: DOMAIN
name: Tscrpt_reg_IclR_C
description: Transcription regulator IclR, C-terminal
Protein sequence:
MIASVVTRFAPSPTGFLHIGGARTALFNWLYARKHGGKMLLRIEDTDRARSTTAAIEAILDGLKWLGIDWDDDVVYQFSRVARHRDIAEQLLAEGKAYRCYATPEELAEMREKARAEGRAKLYDGRWRDRDPSEAPPDLKPTIRLKAPLSGETVIEDQVQGRVVWQNENLDDLVLLRGDGTPTYMLAVVVDDHDMGVTHIIRGDDHLINAARQKQIYDTLGWALPTMAHIPLIHGPDGSKLSKRHGALGVDAYRAMGYLPAALRNYLVRLGWSHGDQEIFSTQEMIDAFDLSAIGRSAARFDFAKLENLNGHYIRNCDDHVLVDLFQDALDYVPRGADLKPKLNDATRAQLLRAMPGLKERAKTLIELIDSARFIFADRPLTLDAKAIPLLTSETRALIGRLRTTLETVTSWSAQTTEAAMRTFAEQNNLKLGAIAQPLRIALTGRTTSPGIFDVLAVLGKETCLARLDDQSSP

Annotated regions:
phrase: VVTRFAPSPTGFLHIGGARTALFNWLYARKHGGKMLLRIEDTDRARSTTAAIEAILDGLKWLGIDWDDDVVYQFSRVARHRDIAEQLLAEGKAYRCYATPEELAEMREKARAEGRAKLYDGRWRDRDPSEAPPDLKPTIRLKAPLSGETVIEDQVQGRVVWQNENLDDLVLLRGDGTPTYMLAVVVDDHDMGVTHIIRGDDHLINAARQKQIYDTLGWALPTMAHIPLIHGPDGSKLSKRHGALGVDAYRAMGYLPAALRNYLVRLGWSHGDQEIFSTQEMIDAFDLSAIGRSAARFDFAKL
type: DOMAIN
name: Glu/Gln-tRNA-synth_Ib_cat-dom
description: Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain

phrase: DLKPKLNDATRAQLLRAMPGLKERAKTLIELIDSARFIFADRPLTLDAKAIPLLTSETRALIGRLRTTLETVTSWSAQTTEAAMRTFAEQNNLKLGAIAQPLRIALTGRTTSPGIFDVLAVLGKETCLARLD
type: DOMAIN
name: aa-tRNA-synth_I_cd-bd
description: Aminoacyl-tRNA synthetase, class I, anticodon-binding

phrase: SVVTRFAPSPTGFLHIGGARTALFNWLYARKHGGKMLLRIEDTDRARSTTAAIEAILDGLKWLGIDWDDDVVYQFSRVARHRDIAEQLLAEGKAYRCYATPEELAEMREKARAEGRAKLYDGRWRDRDPSEAPPDLKPTIRLKAPLSGETVIEDQVQGRVVWQNENLDDLVLLRGDGTPTYMLAVVVDDHDMGVTHIIRGDDHLINAARQKQIYDTLGWALPTMAHIPLIHGPDGSKLSKRHGALGVDAYRAMGYLPAALRNYLVRLGWSHGDQEIFSTQEMIDAFDLSAIGRSAARFDFAKLENLNGHYIR
type: DOMAIN
name: GluRS_core
description: Glutamyl-tRNA synthetase

phrase: PSPTGFLHIGG
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site
Protein sequence:
MRAMSTNPPNLRPDLAPAARLGTAATRPGQPTIGMVSLGCPKALVDSERILTRLRAEGYGISPDYAGADAVIVNTCGFLDSAKAESLDAIGEALKENGKVIVTGCLGAEPDYIREHHPRILAVTGPHQYEQVLDAVHGAVPPDPDPFVDLLPASGVQLTPRHYSYLKISEGCNHKCKFCIIPDMRGKLASRPAHAVLREAEKLVDNGVKELLIISQDTSAYGLDRKYDTNLWKNREVRSHITDLARELGQLDAWVRLHYVYPYPHVRELIPLMADAGCNLLPYLDIPFQHAHPDTLKRMARPAAAARTLDEIAAWREICPEITLRSTFIVGYPGETEAEFQTLLDWMDEAQLDRVGCFQYENVAGARSNDLPDHVPAEVKQERWDRFMAKAQAISEAKLAARVGQVIEVIVDEVDDEAATCRTKSDAPEIDGNLFIDEGFEGLQPGDIVTVEVDEAGEYDLWGRLR

Annotated regions:
phrase: LTPRHYSYLKISEGCNHKCKFCIIPDMRGKLASRPAHAVLREAEKLVDNGVKELLIISQDTSAYGLDRKYDTNLWKNREVRSHITDLARELGQLDAWVRLHYVYPYPHVRELIPLMADAGCNLLPYLDIPFQHAHPDTLKRMARPAAAARTLDEIAAWREICPEITLRSTFIVGYPGETEAEFQTLLDWMDEAQLDRVGCFQYENVAGARSNDLPDHVPAEVKQERWDRFMAKAQAISE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: PTIGMVSLGCPKALVDSERILTRLRAEGYGISPDYAGADAVIVNTCGFLDSAKAESLDAIGEALKENGKVIVTGCLGAEPDYIREHHPRILAVTGPHQYEQVLDAVHGAV
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: KISEGCNHKCKFCIIPDMRGKLASRPAHAVLREAEKLVDNGVKELLIISQDTSAYGLDRKYDTNLWKNREVRSHITDLARELGQLDAWVRLHYVYPYPHVRELIPLMADAGCNLLPYLDIPFQHAHPDTLKRMARPAAAARTLDEIAAWREICPEITLRSTFIVGYPGETEAEFQTLLD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: GMVSLGCPKALVDSERILTRLRAEGYGISPDYAGADAVIVNTCGFLDSAKAESLDAIGEALKENGKVIVTGCLGAEPDYIREHH
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: AARVGQVIEVIVDEVDDEAATCRTKSDAPEIDGNLFIDEGFEGLQPGDIVTVEVDEAGEYDLWGRL
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: VGQVIEVIVDEVDDEAATCRTKSDAPEIDGNLFIDEGFEGLQPGDIVTVEVDEAGEYDLWG
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: HYSYLKISEGCNHKCKFCIIPDMRGKLASRPAHAVLREAEKLVDNGVKELLIISQDTSAYGLDRKYDTNLWKNREVRSHITDLARELGQLDAWVRLHYVYPYPHVRELIPLMADAGCNLLPYLDIPFQHAHPDTLKRMARPAAAARTLDEIAAWREICPEITLRSTFIVGYPGETEAEFQTLLDWMDEAQLDRVGCFQYENVAGARSNDLPDHVPAEVKQERWDRFM
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain
Protein sequence:
MDHGFYESNLDGEGLRIGIVQARFNEPVCDELREACMAELKKLGVEGEDTLLVTVPGALEVPLALQKMAESGQFDALVALGAVVRGETYHFELVSNESGAGITRVGLDFNVPIANGILTVDTDAQAHARTREKGRDCARAAVEMANLVVALDSLREHGAEDAEDEEDDE

Annotated regions:
Protein sequence:
MTKKAILGLEAAEISALLPDEKPFRSRQIYTWLSQGVLDFSQMTNIPIDLREKLEALFFITRSTVQQELKDPDGTIKLQIELFDGHCIETVLLIDADKRKTACVSCQVGCAMKCAFCKTGTLGFKRNLESYEIIEQFFFLEKICGRLDNIVFMGMGEPMKNLSAIRKTITFLTEPKGRNLSPRRITLSTSGLVDGIYDLADNGPDIRLAISLTTANPKTREAIMPIAKTNTLDALKEATRYFIEKRKKRVSLEVALMKDINTGSEEIALLIDFAKNLDVHINLIPWNPIEELPFSEPSNNEVQRVLKTLQSAGINATIRKKRGRKIGGSCGQLGKLRLDK

Annotated regions:
phrase: SCQVGCAMKCAFCKTGTLGFKRNLESYEIIEQFFFLEKICGRLDNIVFMGMGEPMKNLSAIRKTITFLTEPKGRNLSPRRITLSTSGLVDGIYDLADNGPDIRLAISLTTANPKTREAIMPIAKTNTLDALKEATRYFIEKRKKRVSLEVALMKDINTGSEE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: ADKRKTACVSCQVGCAMKCAFCKTGTLGFKRNLESYEIIEQFFFLEKICGRLDNIVFMGMGEPMKNLSAIRKTITFLTEPKGRNLSPRRITLSTSGLVDGIYDLADNGPDIRLAISLTTANPKTREAIMPIAKTNTLDALKEATRYFIEKRKKRVSLEVALMKDINTGSEEIALLIDFAKNLDVHINLIPWNPIEELPFSEPSNNEVQRVLKTLQSAGINATIRKKRGR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: DEKPFRSRQIYTWLSQGVLDFSQMTNIPIDLREKLEALFF
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MINIKKGLDLPIEGAPQQVIHDGSTVKRVAVLGEEFIGMRPTMHVRVDDQVKKGQVLFEDKKNPGVLFTAPASGTVKEINRGAKRVLQSVVIEVNGSEQITFGTFSDAELSSLDREKAKEVLIQSGQWTALRARPFSKVAAVDANPSSIFVTAIDTNPLAADPAVIIAENVQAFEAGLAVVSRLTDGKVFVCKQAGSQVPSSSIAQVEVHEFGGVHPAGLVGTHIHHLDAVSISKQVWHIGYQDVIAFGHLFLTGEIYTDRVISLAGPRVKNPRLVKTQLGASLDDLVAGELEDGDNRVISGSVLSGSISNGVHAFLGRYHVQVSVLLEGREKELFGWIAPGSDKFSVTRTFISHLAPSRLFKMTTSTGGSKRAMVPIGSYERVMPLDILPTLLLRDLLSRDVDSAMSLGALELDEEDLALCTFVCPGKYEYGAALRDCLTTIEKEG

Annotated regions:
phrase: INIKKGLDLPIEGAPQQVIHDGSTVKRVAVLGEEFIGMRPTMHVRVDDQVKKGQVLFEDKKNPGVLFTAPASGTVKEINRGAKRVLQSVVIE
type: DOMAIN
name: NQRA_N
description: NqrA, N-terminal barrel-sandwich hybrid domain

phrase: VISLAGPRVKNPRLVKTQLGASLDDLVAGELEDGDNRVISGSVLSGSI
type: DOMAIN
name: NqrA_C_domain
description: Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain

phrase: LDREKAKEVLIQSGQWTALRARPFSKVAAVDANPSSIFVTAIDTNPLAADPAVIIAENVQAFEAGLAVVSRLTDGKVFVCKQAGSQVPSSSIAQVEVHEFGGVHPAGLVGTHIHHLDAVSISKQVWHIGYQDVIAFGHLFLTGE
type: DOMAIN
name: NQRA_2nd
description: NqrA, second alpha/beta domain
Protein sequence:
MRCPKCGYNKSSVVDSRQAEEGTTIRRRRECEKCGNRFTTFERLEELPLLVIKKDGTREQFSRDKILNGIIQSAQKRPVSSEDIENCILRIERKIRSEYEDEVSSITIGNLVMDELAELDEITYVRFASVYKSFKDVDEIEELLQQITKRVRSKKSGSV

Annotated regions:
phrase: LLVIKKDGTREQFSRDKILNGIIQSAQKRPVSSEDIENCILRIERKIRSEYEDEVSSITIGNLVMDELAELDEITYVRFASVYKSFKDVD
type: DOMAIN
name: ATP-cone_dom
description: ATP-cone domain

phrase: LVIKKDGTREQFSRDKILNGIIQSAQKRPVSSEDIENCILRIERKIRSEYEDEVSSITIGNLVMDELAELDEITYVRFASVYKSFK
type: DOMAIN
name: ATP-cone_dom
description: ATP-cone domain

phrase: MRCPKCGYNKSSVVDSRQAEEGTTIRRRRECEKCGNRFTTF
type: DOMAIN
name: NrdR-like_N
description: Transcriptional repressor NrdR-like, N-terminal domain
Protein sequence:
MEIKNLTTEQRNPASIHIDTVSTVEMVKIMNEEDQKVALAVGNQDEQIARAIDEAANRYKKGGRLIYLGAGTSGRLGVLDAAELVPTYGIKPERAIGLIAGGPGAMYKAVEGAEDDTNLGAEDLKDLNLNSQDIVLGLAASGRTPYVIGGLEYANQIGAFTISIACVKDSEIGKHAEVAIEAVVGPEIVTGSTRMKSGTAQKMILNMISTGVMIRQGKVFENVMIDVMPTNSKLVDRASRIISAVTDATQEEALQTLKKAENNVPLAITMIKTESNKDEAQKLLEQYNGNVSEVIKNN

Annotated regions:
phrase: AANRYKKGGRLIYLGAGTSGRLGVLDAAELVPTYGIKPERAIGLIAGGPGAMYKAVEGAEDDTNLGAEDLKDLNLNSQDIVLGLAASGRTPYVIGGLEYANQIGAFTISIACVKDSEIGKHAEVAIEAVVGPEIVTGSTRMKSGTAQKMILNMISTGVMIRQG
type: DOMAIN
name: SIS_dom
description: SIS domain

phrase: GPEIVTGSTRMKSGTAQ
type: CONSERVED_SITE
name: Glucokinase_regulatory_CS
description: Glucokinase regulatory protein, conserved site

phrase: QIARAIDEAANRYKKGGRLIYLGAGTSGRLGVLDAAELVPTYGIKPERAIGLIAGGPGAMYKAVEGAEDDTNLGAEDLKDLNLNSQDIVLGLAASGRTPYVIGGLEY
type: DOMAIN
name: SIS_dom
description: SIS domain
Protein sequence:
MALWGGRFTQAADQRFKQFNDSLRFDYRLAEQDIVGSVAWSKALVTVGVLTADEQRQLEEALNVLLEEVRANPQQILQSDAEDIHSWVEGKLIDKVGQLGKKLHTGRSRNDQVATDLKLWCKETVRELLTANRQLQSALVETAQANQDAVMPGYTHLQRAQPVTFAHWCLAYVEMLARDESRLQDTLKRLDVSPLGCGALAGTAYEIDREQLAGWLGFTSATRNSLDSVSDRDHVLELLSDAAIGMVHLSRFAEDLIFFNSGEAGFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQGALTGMMMTLKGLPLAYNKDMQEDKEGLFDALDTWLDCLHMAALVLDGIQVKRLRCQDAAQQGYANATELADYLVAKGVPFREAHHIVGEAVVEAIRQGKPLEALPLADLQKFSRVIGDDVYPILSLQSCLDKRAAKGGVSPQQVAQAIDDARARLAL

Annotated regions:
phrase: YANATELADYLVAKGVPFREAHHIVGEAVVEAIRQGKPLEALPLADLQKFSRVIGDDVYPILSLQSC
type: DOMAIN
name: Arg_succ_lyase_C
description: Argininosuccinate lyase, C-terminal

phrase: GRFTQAADQRFKQFNDSLRFDYRLAEQDIVGSVAWSKALVTVGVLTADEQRQLEEALNVLLEEVRANPQQILQSDAEDIHSWVEGKLIDKVGQLGKKLHTGRSRNDQVATDLKLWCKETVRELLTANRQLQSALVETAQANQDAVMPGYTHLQRAQPVTFAHWCLAYVEMLARDESRLQDTLKRLDVSPLGCGALAGTAYEIDREQLAGWLGFTSATRNSLDSVSDRDHVLELLSDAAIGMVHLSRFAEDLIFFNSGEAGFVELSDRVTSGSSLMPQKKNPDALELIRGKCGRVQ
type: DOMAIN
name: Fumarate_lyase_N
description: Fumarate lyase, N-terminal

phrase: GSSLMPQKK
type: CONSERVED_SITE
name: Fumarate_lyase_CS
description: Fumarate lyase, conserved site
Protein sequence:
MTNWNYQLTHFVTSAPDIRHLPADTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVAEGKRLVDLPGYGYAQVPEEMKIKWQRALGEYLEKRLCLKGLVVLMDIRHPLKDLDQQMIEWAVESDIQVLVLLTKADKLASGARKAQVNMVREAVLAFNGDIQVEPFSSLKKSGVDKLRQKLDSWFNEIPPQEAVEDAE

Annotated regions:
phrase: TGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVAEGKRLVDLPGYGYAQVPEEMKIKWQRALGEYLEKRLCLKGLVVLMDIRHPLKDLDQQMIEWAVESDIQVLVLLTKADKLASGARKAQVNMVREAVLAFNGDIQVEPFSSLKKSGVDKLRQKLDSWFN
type: DOMAIN
name: G_ENGB_dom
description: EngB-type guanine nucleotide-binding (G) domain

phrase: EVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVAEGKRLVDLPGYGYAQVPEEMKIKWQRALGEYLEKRLCLKGLVVLMDIRHPLKDLDQQMIEWAVESDIQVLVLLT
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: EVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVAEGKRLVDLPGYGYAQVPEEMKIKWQRALGEYLEKRLCLKGLVVLMDIRHPLKDLDQQMIEWAVESDIQVLVLLTKADKLASGARKAQVNMVREAVLAFNGDIQVEPFSSLKKSGVDKLRQKLDSW
type: DOMAIN
name: G_ENGB_dom
description: EngB-type guanine nucleotide-binding (G) domain
Protein sequence:
MNAKIRYGLSAAVLALIGAGASAPEILDQFLDEKEGNHTTAYRDGTGIWTICRGAILVDGKPVVPGMKLSKEKCDQVNAIERDKALAWVEKNIKVPLTDPQKAGIASFCPYNIGPGKCFPSTFYRRINAGDRRGACEAIRWWIKDGGRDCRIRSNNCYGQVSRRDQESALACWGIDR

Annotated regions:
Protein sequence:
MGTRLKVLRVFKQLQRTRMDVFKDDDIALKAARLKINEEFRKNRNETSEENINEMIKLGSNVETVLRESVLQMEHVGEDKLLLRPRKSLLLENVPYCDEPRKKS

Annotated regions:
phrase: KVLRVFKQLQRTRMDVFKDDDIALKAARLKINEEFRKNRNETSEENINEMIKLG
type: DOMAIN
name: Complex1_LYR_dom
description: Complex 1 LYR protein domain

phrase: VLRVFKQLQRTRMDVFKDDDIALKAARLKINEEFRKNRNETSEENINEMIKLGSNVETVLRESVLQMEHVG
type: DOMAIN
name: Complex1_LYR_LYRM7
description: LYRM7, LYR domain
Protein sequence:
MRIGHGFDVHKFGGEGPVIIGGVSVPYEQGLIAHSDGDVALHALCDALLGAIAEGDIGRHFPDTDDKWKGADSRALLRDVYRRVKEKGLELGNADVTIIAQAPKMAPHIKHMCAAIAEDLETSLDNVNVKATTSEGLGFTGRKEGIACEAVVLLVKKSY

Annotated regions:
phrase: MRIGHGFDVHKFGGEGPVIIGGVSVPYEQGLIAHSDGDVALHALCDALLGAIAEGDIGRHFPDTDDKWKGADSRALLRDVYRRVKEKGLELGNADVTIIAQAPKMAPHIKHMCAAIAEDLETSLDNVNVKATTSEGLGFTGRKEGIACEAVVLLV
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RIGHGFDVHKFGGEGPVIIGGVSVPYEQGLIAHSDGDVALHALCDALLGAIAEGDIGRHFPDTDDKWKGADSRALLRDVYRRVKEKGLELGNADVTIIAQAPKMAPHIKHMCAAIAEDLETSLDNVNVKATTSEGLGFTGRKEGIACEAVVLLV
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: SDGDVALHALCDALL
type: CONSERVED_SITE
name: MECDP_synthase_CS
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site

phrase: RIGHGFDVHKFGGEGPVIIGGVSVPYEQGLIAHSDGDVALHALCDALLGAIAEGDIGRHFPDTDDKWKGADSRALLRDVYRRVKEKGLELGNADVTIIAQAPKMAPHIKHMCAAIAEDLETSLDNVNVKATTSEGLGFTGRKEGIACEAVVL
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: MRIGHGFDVHKFGGEGPVIIGGVSVPYEQGLIAHSDGDVALHALCDALLGAIAEGDIGRHFPDTDDKWKGADSRALLRDVYRRVKEKGLELGNADVTIIAQAPKMAPHIKHMCAAIAEDLETSLDNVNVKATTSEGLGFTGRKEGIACEAVVLLVK
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: MRIGHGFDVHKFGGEGPVIIGGVSVPYEQGLIAHSDGDVALHALCDALLGAIAEGDIGRHFPDTDDKWKGADSRALLRDVYRRVKEKGLELGNADVTIIAQAPKMAPHIKHMCAAIAEDLETSLDNVNVKATTSEGLGFTGRKEGIACEAVVL
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase