nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MEKREFNIIAETGIHARPATLLVQAASKFNSDINLEYKGKSVNLKSIMGVMSLGVGQGADVTISAEGADEADAIAAITDTMKKEGLAE

Annotated regions:
phrase: MEKREFNIIAETGIHARPATLLVQAASKFNSDINLEYKGKSVNLKSIMGVMSLGVGQGADVTISAEGADEADAIAAITDT
type: DOMAIN
name: HPr-like
description: Phosphocarrier protein HPr-like

phrase: EFNIIAETGIHARPATLLVQAASKFNSDINLEYKGKSVNLKSIMGVMSLGVGQGADVTISAE
type: DOMAIN
name: HPr-like
description: Phosphocarrier protein HPr-like

phrase: GIHARPATLLVQAASK
type: DOMAIN
name: HPr-like
description: Phosphocarrier protein HPr-like

phrase: KGKSVNLKSIMGVMS
type: DOMAIN
name: HPr-like
description: Phosphocarrier protein HPr-like

phrase: LGVGQGADVTISAEGAD
type: DOMAIN
name: HPr-like
description: Phosphocarrier protein HPr-like

phrase: GIHARPA
type: PTM
name: PTS_HPr_His_P_site
description: Phosphotransferase system, HPr histidine phosphorylation site

phrase: MEKREFNIIAETGIHARPATLLVQAASKFNSDINLEYKGKSVNLKSIMGVMSLGVGQGADVTISAEGADEADAIAAITDTMKKEGLA
type: DOMAIN
name: HPr-like
description: Phosphocarrier protein HPr-like

phrase: GKSVNLKSIMGVMSL
type: PTM
name: PTS_HPr_Ser_P_site
description: Phosphotransferase system, HPr serine phosphorylation site

phrase: KREFNIIAETGIHARPATLLVQAASKFNSDINLEYKGKSVNLKSIMGVMSLGVGQGADVTISAEGADEADAIAAITDTM
type: DOMAIN
name: HPr-like
description: Phosphocarrier protein HPr-like
Protein sequence:
MSTNPKPQRKTKRNTNRRPQDVKFPGGGQIVGGVYLLPRRGPRLGVRATRKTSERSQPRGRRQPIPKARRPEGRSWAQPGYPWPLYANEGCGWAGWLLSPRGSRPSWGPSDPRRRSRNLGKVIDTLTCGFADLMGYIPLVGAPLGGAARALAHGVRVLEDGVNYATGNLPGCSFSIFLLALLSCLTVPASAYQVRNSTGLYHVTNDCPNSSVVYEAPDAILHTPGCVPCVREGNVSRCWVAITPTVATRDGKLPTTQLRRHIDLLVGTATLCSALYVGDLCGSVFLVGQLFTFSPRRYWTTQDCNCSIYSGHISGHRMAWDMMMNWSPTAALVVSQLLRIPQAIVDMVAGAHWGVLAGLAYYSMVGNWAKVLVVMLLFAGVDAETYVTGGTAGHTVGGLTXXXXXXXXXXXXXINSNGSWHINSTALNCNESLDTGWLAGLFYYNKFNSTGCPERLASCRSLNDFDQGWGPISHANGSGPDQRPYCWHYPPKPCGIVPAQSVCGPVYCFTPSPVVVGTTDRSGAPTYSWGANDTDVFVLNNTRPPLGNWFGCTWMNSSGYTKVCGAPPCVIGGVGNNTLTCPTDCFRKHPEATYSKCGSGPWLTPRCLVDYPYRLWHYPCTINFTIFKIRMFVGGLEHRLEAACNWTRGERCNLEDRDRSELSPLLLSTTEWQILPCSFTTLPALSTGLIHLHQNTVDVQYLYGIGSVVVSFAIKWEYIVLLFLLLADARVCACLWMMMMVAQAEAALENLVVLNAASLAGTHGFVSF

Annotated regions:
phrase: VTGGTAGHTVGGLTXXXXXXXXXXXXXINSNGSWHINSTALNCNESLDTGWLAGLFYYNKFNSTGCPERLASCRSLNDFDQGWGPISHANGSGPDQRPYCWHYPPKPCGIVPAQSVCGPVYCFTPSPVVVGTTDRSGAPTYSWGANDTDVFVLNNTRPPLGNWFGCTWMNSSGYTKVCGAPPCVIGGVGNNTLTCPTDCFRKHPEATYSKCGSGPWLTPRCLVDYPYRLWHYPCTINFTIFKIRMFVGGLEHRLEAACNWTRGERCNLEDRDRSELSPLLLSTTEWQILPCSFTTLPALSTGLIHLHQNTVDVQYLYGIGSVVVSFAIKWEYIVLLFLLLAD
type: DOMAIN
name: HCV_NS1
description: Hepatitis C virus, Non-structural protein E2/NS1

phrase: SRNLGKVIDTLTCGFADLMGYIPLVGAPLGGAARALAHGVRVLEDGVNYATGNLPGCSFSIFLLALLSCLTVPA
type: DOMAIN
name: HCV_Core_C
description: Hepatitis C virus, Core protein, C-terminal

phrase: STNPKPQRKTKRNTNRRPQDVKFPGGGQIVGGVYLLPRRGPRLGVRATRKTSERSQPRGRRQPIPKARRPEGRSWAQPGYPWPLYANEGCGWAGWLLSPRGSRPSWGPSDPRR
type: DOMAIN
name: HCV_core_N
description: Hepatitis C virus, Core protein, N-terminal

phrase: QVRNSTGLYHVTNDCPNSSVVYEAPDAILHTPGCVPCVREGNVSRCWVAITPTVATRDGKLPTTQLRRHIDLLVGTATLCSALYVGDLCGSVFLVGQLFTFSPRRYWTTQDCNCSIYSGHISGHRMAWDMMMNWSPTAALVVSQLLRIPQAIVDMVAGAHWGVLAGLAYYSMVGNWAKVLVVMLLFAGV
type: DOMAIN
name: HCV_Env
description: Hepatitis C virus, Envelope glycoprotein E1
Protein sequence:
MRESAFLVLCLLLTSPTSQITVASDGCQARTFGQSSTVCECNATHCDSVGLVRLPAVGNFLTFLSSQAGSRLQKEQSQVQRNSSGTALRITLVPMQKYQHVKGFGGAMTDAAAMNILSLSDGTQDQLLRQYFSPEGIEYNVIRVPMASCDFSTRLYTYADSPNDYSLLNFSLREEDVHMKIPLLQRAQALSSRPLALFASAWSAPGWLKTNGALIGKGSLKGKPGGKEHKTWAQYYIRFLDEYKKHNLSFWGLTTGNEPTAGKMTNYSFQALGFTPETQRDWIALDLGPALHSSPYAKTRLMILDDQRLLLPYWAKVVLGDIHAARYVHGIGVHWYWDHFAPAKITLTTTHNLYPEYFLFGTEACSGWNKLDPGVRLGSWERAEAYAHDIIEDLNNYVSGWTDWNLALNLEGGPNWVKNFVDSPIIVNQRSDVFYKQPAFYSMAHFSKFLWEGSQRVGVSVSQHTDLESTAFIRPDGSAVLIVLNRSDAEVTFELWDQPVGFLPAAAPPHSILTLLWARS

Annotated regions:
phrase: VKGFGGAMTDAAAMNILSLSDGTQDQLLRQYFSPEGIEYNVIRVPMASCDFSTRLYTYADSPNDYSLLNFSLREEDVHMKIPLLQRAQALSSRPLALFASAWSAPGWLKTNGALIGKGSLKGKPGGKEHKTWAQYYIRFLDEYKKHNLSFWGLTTGNEPTAGKMTNYSFQALGFTPETQRDWIALDLGPALHSSPYAKTRLMILDDQRLLLPYWAKVVLGDIHAARYVHGIGVHWYWDHFAPAKITLTTTHNLYPEYFLFGTEACSGWNKLDPGVRLGSWERAEAYAHDIIEDLNNYVSGWTDWNLALNLEGGPNWVKNFVDSPIIVNQRSDVFYKQPAFYSMAHFSKF
type: DOMAIN
name: Glyco_hydro_30_TIM-barrel
description: Glycosyl hydrolase family 30, TIM-barrel domain

phrase: GSQRVGVSVSQHTDLESTAFIRPDGSAVLIVLNRSDAEVTFELWDQPVGFLPAAAPPHSILT
type: DOMAIN
name: GH30_C
description: Glycosyl hydrolase family 30, beta sandwich domain
Protein sequence:
MTQQKSQRVPRVGFVSLGCPKATVDSEHILTRLRAEGYDLSGSYDDADLVVVNTCGFIDAAVEESLDAIGEALAENGKVIVTGCLGAKDDVILAAHPQVLAVTGPHATDAVVKAVHQHLPKPHDPFTDLIPPQGIRLTPAHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVHDVMREAESLVDSGVKELLVISQDTSAYGVDMKYRTGFWNGRPLKTRLIDLAKALGELGVWVRMHYVYPYPSVDELIPLMAEGKILPYLDVPFQHASPRILKAMKRPGNVENVLERIRKWRSICPDLTIRSTFITGFPGETDEDFEQLLRFLEEAQLDRVGAFAYSPVEGAAANLLADPVPDEVREERRMRLMDFQEDISTQRLERWIGRDITVLVEEVDDEGAVARSGSDAPEVDGLVIIPDGDGLVPGEFAKVRVTDCDVHDLYARPLP

Annotated regions:
phrase: RVGFVSLGCPKATVDSEHILTRLRAEGYDLSGSYDDADLVVVNTCGFIDAAVEESLDAIGEALAENGKVIVTGCLGAKDDVILAAHPQVL
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: IGRDITVLVEEVDDEGAVARSGSDAPEVDGLVIIPDGDGLVPGEFAKVRVTDCDVHDLYA
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: LTPAHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVHDVMREAESLVDSGVKELLVISQDTSAYGVDMKYRTGFWNGRPLKTRLIDLAKALGELGVWVRMHYVYPYPSVDELIPLMAEGKILPYLDVPFQHASPRILKAMKRPGNVENVLERIRKWRSICPDLTIRSTFITGFPGETDEDFEQLLRFLEEAQLDRVGAFAYSPVEGAAANLLADPVPDEVREERRMRLMDFQEDISTQ
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: KISEGCNHRCSFCIIPSMRGDLVSRPVHDVMREAESLVDSGVKELLVISQDTSAYGVDMKYRTGFWNGRPLKTRLIDLAKALGELGVWVRMHYVYPYPSVDELIPLMAEGKILPYLDVPFQHASPRILKAMKRPGNVENVLERIRKWRSICPDLTIRSTFITGFPGETDEDFEQLLRF
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LKISEGCNHRCSFCIIPSMR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: HYAYLKISEGCNHRCSFCIIPSMRGDLVSRPVHDVMREAESLVDSGVKELLVISQDTSAYGVDMKYRTGFWNGRPLKTRLIDLAKALGELGVWVRMHYVYPYPSVDELIPLMAEGKILPYLDVPFQHASPRILKAMKRPGNVENVLERIRKWRSICPDLTIRSTFITGFPGETDEDFEQLLRFLEEAQLDRVGAFAYSPVEGAAANLLADPVPDEVREERRMRLM
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: ERWIGRDITVLVEEVDDEGAVARSGSDAPEVDGLVIIPDGDGLVPGEFAKVRVTDCDVHDLYARPL
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: PRVGFVSLGCPKATVDSEHILTRLRAEGYDLSGSYDDADLVVVNTCGFIDAAVEESLDAIGEALAENGKVIVTGCLGAKDDVILAAHPQVLAVTGPHATDAVVKAVHQHL
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal
Protein sequence:
MDPKTSAGQCPVMHGANTTAAQSNTAWWPNALNLDILHQHDTKTNPLGEGYRYREAVKQLDVAALKADLTALMTRSQPWWPADWGHYGGLMIRMAWHAAGSYRVADGRGGAGTGNQRFAPLNSWPDNANLDKARRLLWPIKKKYGAKISWADLIVLAGNVAYESMGLKTYGFAFGREDIWHPEKDIYWGSEKAWLAPTGGEGSRYSGQRDLENPLAAVMMGLIYVNPEGVDGQPDPLKTAQDVRVTFARMAMDDEETVALTAGGHTVGKSHGNGSAANLGPAPEGADVHEQGLGWNNHSSRGIGRDTVTSGIEGAWTTHPTQWDNGYFKLLLGYDWELKKSPAGAWQWEPVGIKEDDKPVDVEDPSIRLNPIMTDADMAMKMDPAYRRISERFAADQAYFSEVFARAWFKLTHRDLGPKSRYIGPEIPAEDLLWQDPVPVGPTAYDVGAVKSRIATSGLSVGELVATAWDSARTWRGSDYRGGANGARIRLAPQKDWAGNEPERLARVLAVLEPIAAAAGASVADVIVLAGNVGVELAAKAAGFDVTVPFAPGRGDATQAQTDVESFEVLEPVADGFRNWQQRSFAVQPEEMLLDRAQLMGLSAPEMTVLVGGLRVLGANHGGSKHGVFTDRVGALTNDFFVTLTDMAHAWVPTGRNSYEIRERASGVVKYTATRADLVFGSNSVLRAYAEVYAQDDSREKFVRDFVAAWVKVMNADRYELQG

Annotated regions:
phrase: LDKARRLLWPIKKKYGAKISWADLIVLAGNVAYESMGLKTYGFAFGREDIWHPEKDIYWGSEKAWLAPTGGEGSRYSGQRDLENPLAAVMMGLIYVNPEGVDGQPDPLKTAQDVRVTFARMAMDDEETVALTAGGHTVGKSHGNGSAANLGPAPEGADVHEQGLGWNNHSSRGIGRDTVTSGIEGAWTTHPTQWDNGYFKLLLGYDWELKKSPAGAWQWEPVGIKEDDKPVDVEDPSIRLNPIMTDADMAMKMDPAYRRISERFAADQAYFSEVFARAWFKLTHRDLGPKSRYI
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: ERLARVLAVLEPIAAAAGASVADVIVLAGNVGVELAAKAAGFDVTVPFAPGRGDATQAQTDVESFEVLEPVADGFRNWQQRSFAVQPEEMLLDRAQLMGLSAPEMTVLVGGLRVLGANHGGSKHGVFTDRVGALTNDFFVTLTDMAHAWVPTGRNSYEIRERASGVVKYTATRADLVFGSNSVLRAYAEVYAQDDSREKFVRDFVAAWVKVMNADRYELQ
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: GGLMIRMAWHA
type: ACTIVE_SITE
name: Peroxidases_AS
description: Peroxidase, active site

phrase: GGLMIRMAWHAAGS
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: ISWADLIVLAGNVAYES
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: GLKTYGFAFGRE
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: TVALTAGGHTVGKSH
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: WTTHPTQWDNGYFKL
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: DWGHYGGLMIRMAWHAAGSYRVADGRGGAGTGNQRFAPLNSWPDNANLDKARRLLWPIKKKYGAKISWADLIVLAGNVAYESMGLKTYGFAFGREDIWHPEKDIYWGSEKAWLAPTGGEGSRYSGQRDLENPLAAVMMGLIYVNPEGVDGQPDPLKTAQDVRVTFARMAMDDEETVALTAGGHTVGKSHGNGSAANLGPAPEGADVHEQGLGWNNHSSRGIGRDTVTSGIEGAWTTHPTQWDNGYFKLLLGYDWELKKSPAGAWQWEPVGIKEDDKPVDVEDPSIRLNPIMTDADMAMKMDPAYRRISERFAA
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: EDLLWQDPVPVGPTAYDVGAVKSRIATSGLSVGELVATAWDSARTWRGSDYRGGANGARIRLAPQKDWAGNEPERLARVLAVLEPIAAAAGASVADVIVLAGNVGVELAAKAAGFDVTVPFAPGRGDATQAQTDVESFEVLEPVADGFRNWQQRSFAVQPEEMLLDRAQLMGLSAPEMTVLVGGLRVLGANHGGSKHGVFTDRVGALTNDFFVTLTDMAHAWVPTGRNSYEIRERASGVVKYTATRADLVFGSNSVLRAYAEVYAQ
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase
Protein sequence:
MYAVIKTGGKQYRVAAGDKLKVEKLAGEVGSEITLDKVLLVSDGDNTTIGSPLVQGASVQAKVVAHGRGDKVLIFKMRRRKHYRKTQGHRQSFTEIQIEKIAAK

Annotated regions:
phrase: VLIFKMRRRKHYRKTQGHRQSF
type: CONSERVED_SITE
name: Ribosomal_bL21_CS
description: Large ribosomal subunit protein bL21, conserved site
Protein sequence:
MGKEQTKGLGLLVLAGGMGTRMKSALPKVLHRFSGRPLVGHVLKSGETVGPDGVGVVVGHGAEAVARELESGSAAWGLRVKAATLLQKELSGSGRAAFEALPFIQDFKEVLVLCGDAPLIRPETLSGLLGHFRSTASAATVLTASVPDPSGYGRIVKNPSGEVLRIVEQSETDAQTAAITEINSGMYVFDAGALAQALPQLKQKGPKKEYYLTDVLELIRGRGLKVTAFQAPDYREILGINSRLQLAEAAAIMRERVLLKLMDSGVTVLDPASAFIEDTVQIGQDTVIHPGVCLSGATVIGRNCSIGPCCAVKDTVLGDGTVVKFGCSLEGARTEADCAVGPFSHLRPAASLKAGAKVGNFSEVKKSVVGARSKVNHLSYIGDATVGDDVNIGAGTITCNYDGVKKHPTVLGNGVFVGSNVNLVAPVTVGAGALLAAGSTITDDVPEGALAIARGRQVIKPLKQKV

Annotated regions:
phrase: VGSNVNLVAPVTVGAGALLAAGSTITDD
type: CONSERVED_SITE
name: Hexapep_transf_CS
description: Hexapeptide transferase, conserved site

phrase: VQIGQDTVIHPGVCLSGATVIGRNCSIGPCCA
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: PTVLGNGVFVGSNVNLVAPVTVGAGALLAAGSTI
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: LVLAGGMGTRMKSALPKVLHRFSGRPLVGHVLKSGETVGPDGVGVVVGHGAEAVARELESGSAAWGLRVKAATLLQKELSGSGRAAFEALPFIQDFKEVLVLCGDAPLIRPETLSGLLGHFRSTASAATVLTASVPDPSGYGRIVKNPSGEVLRIVEQSETDAQTAAITEINSGMYVFDAGALAQALPQLKQKGPKKEYYLTDVLELIRGRGLKVTAFQ
type: DOMAIN
name: NTP_transferase_dom
description: Nucleotidyl transferase domain

phrase: GVTVLDPASAFIEDTVQIGQDTVIHPGVCLSGATVIGRNCSIGPCCAVKDTVLGDGTVVKFGCSLEGARTEADCAVGPFSHLRPAASLKAGAKVGNFSEVKKSVVGARSKVNHLSYIGDATVGDDVNIGAGTITCNYDGVKKHPTVLGNGVFVGSNVNLVAPVTVGAGALLAAGSTITDDVPEGALAIARGR
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain
Protein sequence:
MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQGLSAWAVKAREYGIINHDVDNFAPRSFFSTLTNVNFDSPRIVGYAREAIALREALKAQCLSVDANAHCDNPMADLQLVSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLKGAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECAMEIGQMNFKVMSILDAGETTKYGHPTPTQVNVKATEGKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLPAHGYPELRKFKHLVGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVGSYDDRIWTRSIVGWPGVSHLEGDDFGPVIAQAQQMAGFPYSEIPHLITVGFGRQTLLGAADTLIDLVSREKLRHIFLVGGCDGARGERNYFTDFATSVPDDCLILTLACGKYRFNKLEFGDIEGLPRLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVKNIVTGPTAPGFFTPDLLAVLNEKFGLRSVTTVEEDMKQLLSA

Annotated regions:
Protein sequence:
MGSGWSSEEEERQPLLGPGLGPAPGAARRGREATAVLPAAGPNPGRVYGRRWLVLLLFSLLAFAQGLVWNTWGPIQNSARQAYGFSGWDIALLVLWGPIGFLPCFAFMWLLDKRGLRVTVLLTSFLMVLGTGLRCIPVSDLALKKRLIHGGQILNGLAGPTVMNAAPFLSTTWFSADERATATAIASMLSYLGGACAFLVGPLVVPAPNGTAPLLAAESSRAHIKDRIETVLYAEFGVVCLIFSATLAYFPPRPPLPPSVAAASQRLSYRRSFCRLLSNLRFLMIALAYAIPLGVFAGWSGVLDLILTPVHVSQVDAGWIGFWSIVGGCVVGIAMARFADFIRGMLKLILLLLFSGATLSSTWFTLTCLNSITHLPLTTVTLYASCILLGVFLNSSVPIFFELFVETVYPVPEGITCGVVTFLSNMFMGVLLFFVTFYHTELSWFNWCLPGSCLLSLLLILCFRESYDRLYLDVVVSV

Annotated regions:
Protein sequence:
MSSSILNELGWRGLVAQSTDLDALADELRRGPMTVYAGFDPTAPSLHVGHLVPLLVLRRFQRAGHRPIVLAGGATGMIGDPRDIGERTLNEAYTVAEWAERIRGQLERFVEFDDVAKSRNGAIVVNNLEWTSPMSAIEFLRDVGKHFSINLMLDRDTIRRRLNGQGISYTEFSYMLLQANDYAELHQRHGCALQIGGSDQWGNIIAGVRLVRQKLGATVHALTVPLVTAADGAKLGKSTGGGSLWLDPEMTSPYAWYQYFINTSDADVIRYLRWFTFLLPEELVELEQTTVSRPQERAAQRRLATELTVLVHGAAATQAVEHASRALFGQGELARLDEATLATALRETVVAELKPGNPDGIVDLLVASGLSPSRGAARRTIDEGGVLVNNIRIQSEEWTPRTSDFLHGRWLVLRRGKRNIAGIERV

Annotated regions:
phrase: NPDGIVDLLVASGLSPSRGAARRTIDEGGVLVNNIRIQSEEWTPRTSDFLHGRWLVLRRGKR
type: DOMAIN
name: SYY-like_C
description: Tyrosine--tRNA ligase SYY-like, C-terminal domain

phrase: GIVDLLVASGLSPSRGAARRTIDEGGVLVNNIRIQSEEWTPRTSDFLHGRWLVLRRGKRNI
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: PTAPSLHVGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site
Protein sequence:
MAGLKLQAVTKSWDGKTQIIQPLTLDVADGEFIVMVGPSGCGKSTLLRMVAGLERVTSGDIWIDRKRVTEMEPKDRGIAMVFQNYALYPHMSVEENMAWGLKIRGMSKAHIEERVREAARILELDGLLKRRPRELSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLELQHLHRRLRTTSLYVTHDQVEAMTLAQRVMVMNKGVAEQIGTPVEVYEKPASRFVASFIGSPAMNLLDGVISASGDRFELPGGLALPIGADYRGHAGRNMTLGIRPEHIALSSQAEGGVPLTVDTLEFLGADNLAHGRWGDQKLVVRLAHQQRPAAGSTLWLHLPEHQRHLFDGETGQRV

Annotated regions:
phrase: LKLQAVTKSWDGKTQIIQPLTLDVADGEFIVMVGPSGCGKSTLLRMVAGLERVTSGDIWIDRKRVTEMEPKDRGIAMVFQNYALYPHMSVEENMAWGLKIRGMSKAHIEERVREAARILELDGLLKRRPRELSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLELQHLHRRLRTTSLYVTHDQVEAMTLAQRVMVMNKGVAEQIGTPVEVYEKPASRFVASF
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: DGEFIVMVGPSGCGKSTLLRMVAGLERVTSGDIWIDRKRVTEMEPKDRGIAMVFQNYALYPHMSVEENMAWGLKIRGMSKAHIEERVREAARILELDGLLKRRPRELSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLELQHLHRRLRTTSLYVTHDQVEAMTLAQRVMVMNKG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LKLQAVTKSWDGKTQIIQPLTLDVADGEFIVMVGPSGCGKSTLLRMVAGLERVTSGDIWIDRKRVTEMEPKDRGIAMVFQNYALYPHMSVEENMAWGLKIRGMSKAHIEERVREAARILELDGLLKRRPRELSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLELQHLHRRLRTTSLYVTHDQVEAMTLAQRVMVMNKGVAEQI
type: DOMAIN
name: ABC_transpr_MalK-like
description: ABC transporter, maltose/maltodextrin import, MalK-like

phrase: LSGGQRQRVAMGRA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: GSPAMNLLDGVISASGDRFELPGGLALPIGADYRGHAGRNMTLGIRPEH
type: DOMAIN
name: OB_MalK-like
description: MalK-like, OB fold domain

phrase: QPLTLDVADGEFIVMVGPSGCGKSTLLRMVAGLERVTSGDIWIDRKRVTEMEPKDRGIAMVFQNYALYPHMSVEENMAWGLKIRGMSKAHIEERVREAARILELDGLLKRRPRELSGGQRQRVAMGRAIVREPAVFLFDEP
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain
Protein sequence:
MVATQQGPDRPGIDDPGRGRRIAIDVGSVRIGVASSDPDGILATPVETVPRSKERGPDAPDIRRIIAIVSEYEAVEVIVGLPQTLRGEQGKAAGIATAFAKRLQRAVEPIPVRLSDERLTTVTAARNLRESGVKARGQRPMIDQAAAVEILQGWLDERSRAVKPGESSKDAALEGDL

Annotated regions:
phrase: GRRIAIDVGSVRIGVASSDPDGILATPVETVPRSKERGPDAPDIRRIIAIVSEYEAVEVIVGLPQTLRGEQGKAAGIATAFAKRLQRAVEPIPVRLSDERLTTVT
type: DOMAIN
name: YqgF/RNaseH-like_dom
description: YqgF/RNase H-like domain
Protein sequence:
MTNPDKQKPVEVTDVETAAEKTSEPTPASGTSTITQRWKREDLIKKASPITRGICLLFSLLAFLIMVSNKHGYGRNFNEYEEYRYVLAISIISTLYTAWQTFAHFSKREFFDRRTSTLVDFSGDQIVAYLLISAASSAIPLTNRFREGQDNIFTDSAASAISMAIFAFVALALSALFSGYKLSTHSFI

Annotated regions:
phrase: LIKKASPITRGICLLFSLLAFLIMVSNKHGYGRNFNEYEEYRYVLAISIISTLYTAWQTFAHFSKREFFDRRTSTLVDFSGDQIVAYLLISAASSAIPLTNRFREGQDNIFTDSAASAISMAIFAFV
type: DOMAIN
name: CASP_dom
description: Casparian strip membrane protein domain
Protein sequence:
MIRTFEMELGGRPFVVELGKVAELAQGSCMIKYGDTFVLVTACASKEPKEGLDFFPLSCDYEEKLYAVGKIPGGFIKRESRPSEKATLTARLIDRPIRPLFPKGYHNDVQVIATVLSVDQDCPPDISAMIGSSIALSVSNIPFMGPTASVSVGMIDGEYIVNPTSEQKELSELELIVSGTKDAVMMIEAGANELTEAQILDAIMFAHEEIKKIVTFIEHIVSEVGKPKSEVIVKETDSELLAEVVSFLDTKLANAIKTVDKTERNENIKAISAEALDYFEEKYEGRSKEVNTILSKQIKVETRKMITSEGIRPDNRKLDEIRPISSEVGILPRTHGTGLFTRGETQVLTVTTLGDLRDAQRIDGLGEEDEKRYMHHYNFPPYSVGETRFMRGPSRREIGHGALVERALKPMIPCKEDFPYAIRLVSEVLACNGSSSQASVCGSTLSLMDAGVPIKGMVAGIAMGLIKEEGQIAILSDIQGMEDALGDMDLKVAGTENGITALQMDIKIAGIDRNIMETALAQAKIGRTHILNKMKEAITSPRTELSAYAPQVTKLKVHPDKVREVIGAGGKVINKIIDETGVKINIENDGTIYIAAPDQESARVALEMIELIVKDPVVGEVYTGKVIKIMDFGAFVEILPGKEGLVHISNLAHERVAKVADVLAEGDLIEVKLMEINPQGKIGLSRKALLPKPEKEAPNKVE

Annotated regions:
phrase: GPTASVSVGMIDGEYIVNPTSEQKELSELELIVSGTKDAVMMIEAGANELTEAQILDAIMFAH
type: DOMAIN
name: ExoRNase_PH_dom2
description: Exoribonuclease, phosphorolytic domain 2

phrase: GMVAGIAMGLIKEEGQIAILSDIQGMEDALGDMDLKVAGTENGITALQMDIKIAGIDRNIMETALAQA
type: DOMAIN
name: ExoRNase_PH_dom2
description: Exoribonuclease, phosphorolytic domain 2

phrase: VVGEVYTGKVIKIMDFGAFVEILPGKEGLVHISNLAHERVAKVADVLAEGDLIEVKLMEINPQGKIGLSR
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: GRPFVVELGKVAELAQGSCMIKYGDTFVLVTACASKEPKEGLDFFPLSCDYEEKLYAVGKIPGGFIKRESRPSEKATLTARLIDRPIRPLFPKGYHNDVQVIATVLSVDQDCPPDISAMIGSSIALSVSNI
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1

phrase: EIRPISSEVGILPRTHGTGLFTRGETQVLTVTTLGDLRDAQRIDGLGEEDEKRYMHHYNFPPYSVGETRFMRGPSRREIGHGALVERALKPMIPCKEDFPYAIRLVSEVLACNGSSSQASVCGSTLSLMDAGV
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1

phrase: ELLAEVVSFLDTKLANAIKTVDKTERNENIKAISAEALDYFEEKYEGRSKEVNTILSKQIKVETRKMITSEGIRPDNR
type: DOMAIN
name: PNPase_PH_RNA-bd_bac/org-type
description: Polyribonucleotide nucleotidyltransferase, RNA-binding domain

phrase: GEVYTGKVIKIMDFGAFVEILPGKEGLVHISNLAHERVAKVADVLAEGDLIEVKLMEINPQGKIGLSR
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: VVGEVYTGKVIKIMDFGAFVEILPGKEGLVHISNLAHERVAKVADVLAEGDLIEVKLMEINPQGKIGLSR
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: TKLKVHPDKVREVIGAGGKVINKIIDETGVKINIENDGTIYIAAPDQESARVALEMI
type: DOMAIN
name: KH_dom_type_1
description: K Homology domain, type 1

phrase: APQVTKLKVHPDKVREVIGAGGKVINKIIDETGVKINIENDGTIYIAAPDQESARVALEMIELIV
type: DOMAIN
name: KH_dom
description: K Homology domain
Protein sequence:
MSWGTELWDQFDNLEKHTQWGIEVLEKYIKFVKERAEIESNYAKQLRNLSKKYQTKKNSKEEEESKYTSCKAFQTTLNEMNDYAGQHEVISENAASLITVELTRFVQELKQERKQHFHEGRKAQQQIETCWKQLEASKRRFERDCKEAERAQQHFEKMDADINVTKADVEKARQQAQIRHQMSDDSKGDYSSVLQKFNREQHEHYFTHIPGIFQKLQDMEEKRIGRMGESLKTYADIDRQVVPIIGKCLDGITKSAESISEKQDSQMVVESFKSGFEPPGDIDFEDFTQNMKRTVSDTSLTKADSKSDPKVPSKSRNKLWPFIKKNKLMSLLTSPHQPPPPPPASSSPSAVPNGPHSPKQQKEPLSHRFNDFMTSKPKMHCFRSLKRGGSTPEDFSNLPPEQRRKKLQQKVDELNKDIQKEIDQRDALTKMRDVYTKNPQMGDAASVGQKLVEIGNNIEKLRVEVQKFEGWLAEVEGRLSARNDSSRRQSGLYDTQNTQTVNNCAQDRESPDGSYTEDHSQEPEVKVTPTEFDDDFDDEEPLPTIGTCKAIYPFDGENEGTISVTEGEILKVIEEDKGDGWTRIRRSEEDEGYVPTSYIEVYLDRNAKDS

Annotated regions:
phrase: QFDNLEKHTQWGIEVLEKYIKFVKERAEIESNYAKQLRNLSKKYQTKKNSKEEEESKYTSCKAFQTTLNEMNDYAGQH
type: DOMAIN
name: FCH_dom
description: FCH domain

phrase: TELWDQFDNLEKHTQWGIEVLEKYIKFVKERAEIESNYAKQLRNLSKKYQTKKNSKEEEESKYTSCKAFQTTLNEMNDYAGQHEVISENAASLITVELTRFVQELKQERKQHFHEGRKAQQQIETCWKQLEASKRRFERDCKEAERAQQHFEKMDADINVTKADVEKARQQAQIRHQMSDDSKGDYSSVLQKFNREQHEHYFTHIPGIFQKLQDMEEKRIGRMGESLKTYADIDRQVVPIIGKCLDGITKSA
type: DOMAIN
name: FNBP1_F-BAR
description: Formin-binding protein 1, F-BAR domain

phrase: PTIGTCKAIYPFDGENEGTISVTEGEILKVIEEDKGDGWTRIRRSEEDEGYVPTSYIEVYL
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: KAIYPFDGENEGTISVTEGEILKVIEEDKGDGWTRIRRSEEDEGYVP
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: NLPPEQRRKKLQQKVDELNKDIQKEIDQRDALTKMRDVYTKNPQMGDAASVGQKLVEIGNNIEKLRVEVQKFEGWLA
type: DOMAIN
name: HR1_rho-bd
description: HR1 rho-binding domain

phrase: MSWGTELWDQFDNLEKHTQWGIEVLEKYIKFVKERAEIESNYAKQLRNLSKKYQTKKNSKEEEESKYTSCKAFQTTLNEMNDYAGQHEVISENAASLITVELTRFVQELKQERKQHFHEGRKAQQQIETCWKQLEASKRRFERDCKEAERAQQHFEKMDADINVTKADVEKARQQAQIRHQMSDDSKGDYSSVLQKFNREQHEHYFTHIPGIFQKLQDMEEKRIGRMGESLKTYADIDRQVVPIIGKCLDGITKSAESISEKQ
type: DOMAIN
name: F_BAR
description: F-BAR domain

phrase: MSWGTELWDQFDNLEKHTQWGIEVLEKYIKFVKERAEIESNYAKQLRNLSKKYQTKKNSKEEEESKYTSCKAFQTTLNEMNDYAGQHEVISEN
type: DOMAIN
name: FCH_dom
description: FCH domain

phrase: GTCKAIYPFDGENEGTISVTEGEILKVIEEDKGDGWTRIRRSEEDEGYVPTSYIEVY
type: DOMAIN
name: SH3_domain
description: SH3 domain
Protein sequence:
MNLWQQNYDPAGNIWLSSLIASLPILFFFFALIKLKLKGYVAASWTVVIALAVALLFYKMPVDHALASVVYGFFYGLWPIAWIIIAAVFVYKISVKTGQFDIIRSSILSITPDQRLQMLIVGFCFGAFLEGAAGFGAPVAITAALLVGLGFNPLYAAGLCLIVNTAPVAFGAMGIPILVAGQVTDLDSFEIGQMVGRQLPFLTIIVLFWIMAIMDGWRGVKETWPAVMVAGGSFAIAQYLSSNFIGPELPDIISSLVSLVCLTLFLKRWQPVRIFRFGDMGASQVDQTLARTRYTTGQIVRAWSPFLFLTATVTLWSIPPFKALFAPGGALYDWVINVPVPYLDKLVARMPPVVHEATAYAAVYKFDWFSATGTAILFAALLSIVWLKMKPSAAIQTFGSTLKELALPIYSIGMVLAFAFISNYSGLSSTLALALAHTGSAFTFFSPFLGWLGVFLTGSDTSSNALFASLQATAAQQIGVSDVLMVAANTTGGVTGKMISPQSIAIACAAVGLVGKESDLFRFTVKHSLIFTCMVGVITTLQAYVLTWMIP

Annotated regions:
Protein sequence:
MRFMGKNKFHTGPGPSQRQLRVGETIRRALSDVLARGDVHDTDLNRLSVTVGEVRASPDLKIATAYVLPLGGQGKDEVIALLARNKGELRRLVAKKLTLKFAPDLRFQLDETFDRMDETREMLNRAEVKRDTGPVPAGESDTE

Annotated regions:
phrase: LRRLVAKKLTLKFAPDLRFQL
type: CONSERVED_SITE
name: Ribosome-bd_factorA_CS
description: Ribosome-binding factor A, conserved site
Protein sequence:
MTTRIDTRFAELKKQGRSAFVTFVMAGDPDLATSLQVLKALPAAGADIIEIGMPFTDPMADGPAIQAAGLRALHSGATLSHTLGLVRDFRKDDDTTPMVLMGYYNPIYIYGVDAFLADAKAAGVDGLIIVDLPPEEDSELCLPAMKAGLNFIRLATPTTDEKRLPAVLANTSGFVYYVSITGITGSASADSAAVGDAVARIKRHTDLPVCVGFGIRTPEAARAIAAEADGAVVGSALIDALQKSLDADNRATKATVGAVADLVASLAAGVRGAKQAAE

Annotated regions:
phrase: IEIGMPFTDPMAD
type: ACTIVE_SITE
name: Trp_synthase_alpha_AS
description: Tryptophan synthase, alpha chain, active site
Protein sequence:
MKSITTASFALILFGVGAASADHASRVLVLGGGAVPSGTKTYTTGIRATIDGDSFCGGSLISPTHVLTTTACIGYTKPANWVSVGTHYLNGTHDGEQIKVVSAQNHTGFNSTSGSYDVALLRLERPSKFMPVKLPAADDSDVIPGMRSSLVGWGYTSYPNGTKAYELQGVGLEVWSNTDCARIYSLDDTMVCAGGGVGKDSCNGDTGGPLIKERGPGDEDDIVVGLVSLGSRMWCGVPRSVFACVESLGMDQLGH

Annotated regions:
phrase: DGDSFCGGSLISPTHVLTTTACIGYTKPANWVSVGTHYLNGTHDGEQIKVVSAQNHTGFNSTSGSYDVALLRLERPSKFMPVKLPAADDSDVIPGMRSSLVGWGYTSYPNGTKAYELQGVGLEVWSNTDCARIYSLDDTMVCAGGGVGKDSCNGDTGGPLIKERGPGDEDDIVVGLVSLGSRMWCGVPRSVFAC
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain

phrase: GTKTYTTGIRATIDGDSFCGGSLISPTHVLTTTACIGYTKPANWVSVGTHYLNGTHDGEQIKVVSAQNHTGFNSTSGSYDVALLRLERPSKFMPVKLPAADDSDVIPGMRSSLVGWGYTSYPNGTKAYELQGVGLEVWSNTDCARIYSLDDTMVCAGGGVGKDSCNGDTGGPLIKERGPGDEDDIVVGLVSLGSRMWCGV
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain

phrase: VLGGGAVPSGTKTYTTGIRATIDGDSFCGGSLISPTHVLTTTACIGYTKPANWVSVGTHYLNGTHDGEQIKVVSAQNHTGFNSTSGSYDVALLRLERPSKFMPVKLPAADDSDVIPGMRSSLVGWGYTSYPNGTKAYELQGVGLEVWSNTDCARIYSLDDTMVCAGGGVGKDSCNGDTGGPLIKERGPGDEDDIVVGLVSLGSRMWCGVPRSVFACVESLGMDQLG
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain

phrase: LVLGGGAVPSGTKTYTTGIRATIDGDSFCGGSLISPTHVLTTTACIGYTKPANWVSVGTHYLNGTHDGEQIKVVSAQNHTGFNSTSGSYDVALLRLERPSKFMPVKLPAADDSDVIPGMRSSLVGWGYTSYPNGTKAYELQGVGLEVWSNTDCARIYSLDDTMVCAGGGVGKDSCNGDTGGPLIKERGPGDEDDIVVGLVSLGSRMWCGVPRSVFACV
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain
Protein sequence:
MAKKSKNLLAALEKIDSTKLYSVEEAVALAKETNFAKFDASVEVAYNLNIDVRKADQQIRGAMVLPNGTGKTSRVLVFARGAKAEEAKAAGADFVGEDDLVAKINGGWLDFDVVIATPDMMAVVGRLGRVLGPRNLMPNPKTGTVTMDVAKAVEESKGGKITYRADKAGIVQALIGKVSFDADKLVENFKAFHDVMAKAKPATAKGTYMTSVFITTTQGVGIKVDPNSL

Annotated regions:
phrase: MMAVVGRLGRVLGPRNLMP
type: CONSERVED_SITE
name: Ribosomal_uL1_CS
description: Large ribosomal subunit protein uL1, conserved site