nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSQADFDKAAEEVKRLKTQPTDEEMLFIYSHFKQATVGDVNTDRPGLLDLKGKAKWDSWNKLKGTSKENAMKTYVEKVEELKKKYGI

Annotated regions:
phrase: QADFDKAAEEVKRLK
type: DOMAIN
name: Acyl-CoA-binding_protein
description: Acyl-CoA-binding protein, ACBP

phrase: PTDEEMLFIYSHFKQATV
type: DOMAIN
name: Acyl-CoA-binding_protein
description: Acyl-CoA-binding protein, ACBP

phrase: DRPGLLDLKGKAKWD
type: DOMAIN
name: Acyl-CoA-binding_protein
description: Acyl-CoA-binding protein, ACBP

phrase: GTSKENAMKTYVEKVEE
type: DOMAIN
name: Acyl-CoA-binding_protein
description: Acyl-CoA-binding protein, ACBP

phrase: PTDEEMLFIYSHFKQATV
type: CONSERVED_SITE
name: Acyl-CoA-binding_prot_CS
description: Acyl-CoA-binding protein, ACBP, conserved site

phrase: QADFDKAAEEVKRLKTQPTDEEMLFIYSHFKQATVGDVNTDRPGLLDLKGKAKWDSWNKLKGTSKENAMKTYVEK
type: DOMAIN
name: Acyl-CoA-binding_protein
description: Acyl-CoA-binding protein, ACBP

phrase: SQADFDKAAEEVKRLKTQPTDEEMLFIYSHFKQATVGDVNTDRPGLLDLKGKAKWDSWNKLKGTSKENAMKTYVEKVEELKKKYG
type: DOMAIN
name: Acyl-CoA-binding_protein
description: Acyl-CoA-binding protein, ACBP

phrase: SQADFDKAAEEVKRLKTQPTDEEMLFIYSHFKQATVGDVNTDRPGLLDLKGKAKWDSWNKLKGTSKENAMKTYVEKVEELKKKY
type: DOMAIN
name: Acyl-CoA-binding_protein
description: Acyl-CoA-binding protein, ACBP
Protein sequence:
MSNILRRGRLEAAQDEEILRYTSSMEADRWIFNADIVVDLAHTVMLREQGIIKEEDCSKILSGLLKIREEGMEKLDFSYEDIHISLESRLIDMVGEDVGGRMHSGRSRNDEVATCIRLTLREELLGLLEEIFALRKTLVSLAEKHSETLMPGFTHLQHAQPTTLAHHLCAHESALGRDFDRVQDAFSRVNLCPLGAAAFASTGFNLNRKRTQELLGFEGLLENSMDAVSSRDFLIECASVFSNLMINLSRIAEELVIWSSSEFNFIELDDMYASTSSIMPQKKNPDTAELMRGKTGVSVGALMSLLTICKGLPLSYNRDLQEATPNIWRSVETVRASVRVMEGMVKTMKVHPDVLAAESITGFTTATELADTFVRETGIPFRTAHQIVGMLAKEREKPTMEKIDSASEVVLGESLSSKGLTENMVKEALNPESNIKRRKIPGGPAPEEMKNYLSKRKTELELNAQEIATLKDIIDSAFENLLSVVEEYRKI

Annotated regions:
phrase: GRLEAAQDEEILRYTSSMEADRWIFNADIVVDLAHTVMLREQGIIKEEDCSKILSGLLKIREEGMEKLDFSYEDIHISLESRLIDMVGEDVGGRMHSGRSRNDEVATCIRLTLREELLGLLEEIFALRKTLVSLAEKHSETLMPGFTHLQHAQPTTLAHHLCAHESALGRDFDRVQDAFSRVNLCPLGAAAFASTGFNLNRKRTQELLGFEGLLENSMDAVSSRDFLIECASVFSNLMINLSRIAEELVIWSSSEFNFIELDDMYASTSSIMPQKKNPDTAELMRGKTG
type: DOMAIN
name: Fumarate_lyase_N
description: Fumarate lyase, N-terminal

phrase: FTTATELADTFVRETGIPFRTAHQIVGMLAKEREKPTMEKIDSASEVVLGESLSSKGLTENMVKEALNPESN
type: DOMAIN
name: Arg_succ_lyase_C
description: Argininosuccinate lyase, C-terminal
Protein sequence:
MLRARLLVPLVRPALVHRLDRCYSTALGSRFRKSNAVRSELKFDFPDVPVKEELFVQETPDKPLKENKTHVSDEDIDSLFDSLMSDHKAAEATEQHKELPPAEQERPSGANTHTAPIKHDTKSPMEYLAKSKLTPHVSRQVAKAMAGSPTQLLLATPASHHISTPAYQNDLWKHVISTLNTSKFQIPDFNSLMTTIPVDIRAQFLPQIEEWISQRGVKPSAITYGQVMLGYAEDGNVEKVEERFRQMIDNNITPTVHTYAHRLKACDKRGDLKQAMEIFDDLKLAQQLYGIRPNQVIFTTLISTSLRNHKVELASQIFEYMKYASLETQPTAHTYNSLITASAIRSNTERALDLFEEMKQKSVANVRTYQSLILACLRQEKYHLKAWELLLELREQHSESFYSRHTLVVVFQAAAVTGDLVFLRSLYKQLCMSPETYPDAILTQLLMQAYARYDTRTKPVASSALRATWGRLYGGNAQEMMRGFLFPDIEGMVQLNEEHPGMIPPFLPTNTIESLSFDRKKIIAESRAIFQFLKNNKPQLLDNIAATDYLKAGARHRDFPEFLRRYNEVSVGAGEAEGAVISPSEMKTYSARQKKPQRYDLQTQFSPAPRSDAHFFIALNAVQADCIADASERDPNLNHPLRRLTPQEMTDRLEFSQDVWVERGKWRKSDAYKNKYRTEAQQISADYNFALKIINALAALKQLGEAAAILSATPATFNWKKHDLAFFHNVAQAFYHEEAMKQIHKAVSRSKHLDEVIRNPDSEKSAEF

Annotated regions:
phrase: ITYGQVMLGYAEDGNVEKVEERFRQMIDNN
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: SAITYGQVMLGYAEDGNVEKVEERFRQMIDNNIT
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: TAHTYNSLITASAIRSNTERALDLFEEMKQKSVA
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: ITYGQVMLGYAEDGNVEKVEERFRQMIDNNITP
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: HTYNSLITASAIRSNTERALDLFEEMKQK
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: TYAHRLKACDKRGDLKQAMEIFDDLKLAQQLYGIRPNQVIFTTLISTSLRNHKVELASQIFEYMKYASLETQPTAHTYNSLITASAIRSNTERALDLFEEMKQKSVANVRTYQSLILACLRQE
type: DOMAIN
name: PROP1-like_PPR_dom
description: PROP1-like, PPR domain
Protein sequence:
MSVAPIDFQQVEKRYDDKLVVDGLSFHVQPGECFGLLGPNGAGKTTTLKMLLGITHPDAGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFARYFGLTAHAARALVPPLLEFAKLESKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCHRLCVIEEGRKIAEGAPRMLIEAEIGCDVIEIYGPDPVQLRDELAPFAERTEISGETLFCYVDNPEPIHARLKGRTGLRYLHRPANLEDVFLRLTGREMLD

Annotated regions:
phrase: DGLSFHVQPGECFGLLGPNGAGKTTTLKMLLGITHPDAGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFARYFGLTAHAARALVPPLLEFAKLESKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPT
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: PGECFGLLGPNGAGKTTTLKMLLGITHPDAGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFARYFGLTAHAARALVPPLLEFAKLESKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCHRLCVIEEGRKI
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LSGGMKRRLTLARA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: IDFQQVEKRYDDKLVVDGLSFHVQPGECFGLLGPNGAGKTTTLKMLLGITHPDAGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFTVRENLLVFARYFGLTAHAARALVPPLLEFAKLESKADAKVGELSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCHRLCVIEEGRKIAEGAPRMLIEAEIGCDVIEI
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain
Protein sequence:
MSEMTLNAAEQPIDELVGWVKQHDFSLNLTTERLAFLIAIAVLSNERFDEELGEGELHDAFAIVTRLFDETGEASAFRANNAINEMVKQRLISRFVSEITDGASIYRLSPLAIGITDYYVRHREFSRLRLSIQLSMVADEMAKAIEAAQKGGTPGHWKKNVYGVLKYSVGEIFDQIDLNQRVMDEQQQSVKQQIADLLNKDWREAINNCEALLSETSSTLRELQDTLQAASDELQTQILDIQEIVYGDPELEFIEEALFGLQMKLDRITSWGQQAIDLWIGYDRHVHKFIRTAIDMDKNRAFSSRLRQSIKDYFDMPWYLTFADAERLSDLRDEALVLRDDEVTGQVPMEVEYEEFQQVNDELSERIGDMLKAHKEQGTPIDLSVVLRDYLAQHPYTHHFDLARIIVDQAVRLGYSESDYQAIQPDWKAINEFGAKVQANVIDRY

Annotated regions:
phrase: SRLRLSIQLSMVADEMAKAIEAAQKGGTPGHWKKNVYGVLKYSVGEIFDQIDLNQRVMDEQQQSVKQQIADLLNKDWREAINNCEALLSETSSTLRELQDTLQAASDELQTQILDIQEIVYGDPELEFIEEALFGLQMKLDRITSWGQQAIDLWIGYDRH
type: DOMAIN
name: MukF_M
description: Chromosome partition protein MukF, middle domain

phrase: VPMEVEYEEFQQVNDELSERIGDMLKAHKEQGTPIDLSVVLRDYLAQHPYTHHFDLARIIVDQAVRLGYSESDYQAIQPDWKAINEFGAKVQANVI
type: DOMAIN
name: MukF_C
description: Chromosome partition protein MukF, C-terminal domain

phrase: EQPIDELVGWVKQHDFSLNLTTERLAFLIAIAVLSNERFDEELGEGELHDAFAIVTRLFDETGEASAFRANNAINEMVKQRLISRFVSEITDGASIYRLSPLAIGITDYYVR
type: DOMAIN
name: MukF_WHTH
description: Chromosome partition protein MukF, winged-helix domain

phrase: KFIRTAIDMDKNRAFSSRLRQSIKDYFDMPWYLTFADAERLSDLRDEALVLRDDEVTGQVPMEVEYEEFQQVNDELSERIGDMLKAHKEQGTPIDLSVVLRDYLAQHPYTHHFDLARIIVDQAVRLGYSESDYQAIQPDWKAINEFGAKVQANVIDR
type: DOMAIN
name: MukF_C
description: Chromosome partition protein MukF, C-terminal domain
Protein sequence:
MSERLTVLVMAAGRGTRMRSSLPKVLHPVCGKPMVEWVIEAARAAGADDVVCIVRPGDGVVEGLPGSVTIAEQRVGEGTGAAVLSAREAVGDEGEVVVLSGDVPLQSPELIADLVSAHRSQRAAATLLTTEGLDPSGYGRIVRAADGSVQQIVETKHIDGVPAEQLAIREINIGTYAFAAAELWTALDEVDTEHGEVYLTGALPVLKRRGLPVNSHLTDDIRSAMGVNDRAALMEVESIAQHQILIAHARNGVTFRAPASVVVEAGVTIGEDTTVGAATTLRGATAIGNGCTIGPATTITDSQLADDISAPHSFLVEARVEQGASLGPFAYLRPGAHVGPGAKIGTFVEVKNAEIGAGAKVPHLSYIGDADIGESANIGAGNITANYDGRHKHRTTIGTGVRTGVDTAFVAPVDIGDGAYTGAGSVITEDVPEGALGMARSKQTNIEGFADRDNRADRDNRKDEERD

Annotated regions:
phrase: GVTFRAPASVVVEAGVTIGEDTTVGAATTLRGATAIGNGCTIGPATTITDSQLADDISAPHSFLVEARVEQGASLGPFAYLRPGAHVGPGAKIGTFVEVKNAEIGAGAKVPHLSYIGDADIGESANIGAGNITANYDGRHKHRTTIGTGVRTGVDTAFVAPVDIGDGAYTGAGSVITEDVPEGALGMARSK
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain

phrase: VLVMAAGRGTRMRSSLPKVLHPVCGKPMVEWVIEAARAAGADDVVCIVRPGDGVVEGLPGSVTIAEQRVGEGTGAAVLSAREAVGDEGEVVVLSGDVPLQSPELIADLVSAHRSQRAAATLLTTEGLDPSGYGRIVRAADGSVQQIVETKHIDGVPAEQLAIREINIGTYAFAAAELWTALDEVDTE
type: DOMAIN
name: MobA-like_NTP_Trfase
description: MobA-like NTP transferase
Protein sequence:
MLKGKTIILGVTGGIAVYKAADLVSRLRKQNAEVEVIMTEAAMEFVTPLTFQTMSNRPVHTSMFNEIDRFDVEHISLAKKADMILVAPATANTIGKIANGIADNLLNTVIMASHAKIVFAPAMNTEMYNNPIFQENMDKLKGLGYEFIDPAVGLLACGDYGAGKMAEPADIVDYVIDAFIEKDLVGKKFVITAGPTIEPIDPVRYVTNHSSGKMGYLLAKEAKSRGADVVLISGPTSLEPPKGVEVVKVNTTREMFVAVGDYFESCDILIKSAAPADYRPENVSAQKIKKREEKEDILNLSLVRNPDIAKHYGSKKTNQIIVGFAAESENLVEYAKAKVLEKNFDFIVANDITMEGAGFKSDTNIITIVDKNGDVEPYPIMTKANVAKVIIDRITSIIK

Annotated regions:
phrase: KTIILGVTGGIAVYKAADLVSRLRKQNAEVEVIMTEAAMEFVTPLTFQTMSNRPVHTSMFNEIDRFDVEHISLAKKADMILVAPATANTIGKIANGIADNLLNTVIMASHAKIVFAPAMNTEMYNNPIFQENMDKLKGLGYEFIDPAVGLLACGDYGAGKMAEPADIVDYVIDA
type: DOMAIN
name: Flavoprotein
description: Flavoprotein

phrase: VGKKFVITAGPTIEPIDPVRYVTNHSSGKMGYLLAKEAKSRGADVVLISGPTSLEPPKGVEVVKVNTTREMFVAVGDYFESCDILIKSAAPADYRPENVSAQKIKKREEKEDILNLSLVRNPDIAKHYGSKKTNQIIVGFAAESENLVEYAKAKVLEKNFDFIVANDITMEGAGFKSDTNIITI
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal
Protein sequence:
MAEKRRFKKRTCKYCEQKVTFIDYKDIELIKHSLSERYKIMPRRLTGNCKKHQVMVEEAIKRARHAALVPYIVDRKRVIPNPFEELQPIYK

Annotated regions:
phrase: IDYKDIELIKHSLSERYKIMPRR
type: CONSERVED_SITE
name: Ribosomal_bS18_CS
description: Small ribosomal subunit protein bS18, conserved site
Protein sequence:
MTIQANVPTGDETSDEASRQTSNEASSEILETARQQVLENGVGLTQAQLEEFLRLPDEALPAALQLAHEVRLKHCGEDVEVEGIISIKTGGCPEDCHFCSQSGLFDSPVRGVWLDIPELVKAAKETAATGATEFCIVAAVRCPDIKLMNQIKFAIDRINEAVDINIACSLGMLTQRQVDQLAEWGVHRYNHNLETARSYFPEVVTTHSYEERLETCNMVKAAGMELCCGALIGMGETLEQRAELAAQLAALEPHEVPLNFLNPRPGTPLENQGIMDGKDALRAIAAFRLAMPRTVLRYAGGRELTLGDLGTREGLLGGINAVIVGNYLTTLGRPATADLSLLVELNMPIKELQKTL

Annotated regions:
phrase: EDVEVEGIISIKTGGCPEDCHFCSQSGLFDSPVRGVWLDIPELVKAAKETAATGATEFCIVAAVRCPDIKLMNQIKFAIDRINEAVDINIACSLGMLTQRQVDQLAEWGVHRYNHNLETARSYFPEVVTTHSYEERLETCNMVKAAGMELCCGALIGMGETLEQRAELAAQLAALEPHEVPLNFLNPRPGTPLENQGIMDGKDALRAIAAFRLAMPRTVLRYAGG
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: IKTGGCPEDCHFCSQSGLFDSPVRGVWLDIPELVKAAKETAATGATEFCIVAAVRCPDIKLMNQIKFAIDRINEAVDINIACSLGMLTQRQVDQLAEWGVHRYNHNLETARSYFPEVVTTHSYEERLETCNMVKAAGMELCCGALIGMGETLEQRAELA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: EGIISIKTGGCPEDCHFCSQSGLFDSPVRGVWLDIPELVKAAKETAATGATEFCIVAAVRCPDIKLMNQIKFAIDRINEAVDINIACSLGMLTQRQVDQLAEWGVHRYNHNLETARSYFPEVVTTHSYEERLETCNMVKAAGMELCCGALIGMGETLEQRAELAAQLAALEPHEVPLNFLNPRPGTPLENQGIMDGKDALRAIAAFRLAM
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: PLNFLNPRPGTPLENQGIMDGKDALRAIAAFRLAMPRTVLRYAGGRELTLGDLGTREGLLGGINAVIVGNYLTTLGRPATADLSLLVELNMP
type: DOMAIN
name: BATS_dom
description: Biotin and thiamin synthesis-associated domain

phrase: PLNFLNPRPGTPLENQGIMDGKDALRAIAAFRLAMPRTVLRYAGGRELTLGDLGTREGLLGGINAVIVGNYLTTLGRPATADLSLLVELN
type: DOMAIN
name: BATS_dom
description: Biotin and thiamin synthesis-associated domain
Protein sequence:
MRITLGSRNPEDRRSSFLHMTASAAATSDSDLNTFADWLEGYYSNRAQAMAEPVWFVPVSLWYVRLPHLFSEGIGFFTEQFNEHTPGRFYRSRVLQVLADPLRIENYKLRDQAAWAGASQDLQRLAQLSLSDLQHLPGCRILVEKRADCYHGQMLPGGGCRLNPGDSTYIHIEFDLTAQEFITWDRGFDATTGQQTWGSRAGPYRYQKRIPVVFPPRP

Annotated regions:
Protein sequence:
MKKYAIILAAGKGTRMKSLREDLSKVSFPILGRPLVKYVLEALKPLGLDEIVTVVGFGGQTSEGIVKADSQVVWQKEQKGTGHAVAQAAPVLEDQEGETIICCGDTPLLTTKTLAAMFSSHETNHNALTIMTAQMANPQGYGRIVKEKGRVMKIVEQKDCTPEQAEITEVNAGVYIFDNKELFKDLKRLTPNNAAGEYYLTDVIGMFVNDGLKVSSFTVADNSETLGINDRYQLSVAAKILQQRINKAFLLSGVSIDDPDTTYIGPDVKIGQDTVIRAGTYLMGNTTIGLENVIGPNCYIENCQIGDYNEIIYSHLTDTTVGNKTTLGPYMRARKNTVLKDGAHVGNFMELKNVEFGVGSKAAHLSYLGDATIGDGVNIGCGTIIANYDGVNKFHSEIGNNVFVGSGSTLISPVHLGDNAFVAAGSTLNKDVPAHAMAIARARQENKEGYSDVLHEKALAKKAAK

Annotated regions:
phrase: VGSGSTLISPVHLGDNAFVAAGSTLNKD
type: CONSERVED_SITE
name: Hexapep_transf_CS
description: Hexapeptide transferase, conserved site

phrase: AIILAAGKGTRMKSLREDLSKVSFPILGRPLVKYVLEALKPLGLDEIVTVVGFGGQTSEGIVKADSQVVWQKEQKGTGHAVAQAAPVLEDQEGETIICCGDTPLLTTKTLAAMFSSHETNHNALTIMTAQMANPQGYGRIVKEKGRVMKIVEQKDCTPEQAEITEVNAGVYIFDNKELFKDLKRLTPNNAAGEYYLTDVIGMFVNDGLKVSSF
type: DOMAIN
name: NTP_transferase_dom
description: Nucleotidyl transferase domain

phrase: HSEIGNNVFVGSGSTLISPVHLGDNAFVAAGSTL
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: GVSIDDPDTTYIGPDVKIGQDTVIRAGTYLMGNTTIGLENVIGPNCYIENCQIGDYNEIIYSHLTDTTVGNKTTLGPYMRARKNTVLKDGAHVGNFMELKNVEFGVGSKAAHLSYLGDATIGDGVNIGCGTIIANYDGVNKFHSEIGNNVFVGSGSTLISPVHLGDNAFVAAGSTLNKDVPAHAMAIARAR
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain
Protein sequence:
MIATQTFVSVFFFVFFLVSLPFFSSAAPPSSDSIYESFVQCFSDKTKSPQAQITDNVFSRTNPSFSSVLRAYIRNGRFNTSSTPKPAIIVTPRSDIHVSAAVTCSKSLNFLLKIRSGGHDYEGLSYISDKPFFILDMSNLRDVSVDIADQSAWISAGATLGEVYYRIWEKSKVHGFPAGVCPTVGVGGHISGGGYGNMLRKFGLSVDNLIDAKIVDVNGQILDRKSMGEDLFWAISGGGGASFGVVLGYKVKLVPVPETVTVFRVEKYMDSGAVDMVHKWQSVGPKTDRNLFLRMLIQPVTRKKVKTVRATVVALFLGRAEEVVALLGKEFPELSLKKENCSEMTWFQSALWWDNRVNPTQIDPKVFLDRNLDRANFGKRKSDYVASEIPRDGIESLFKKMTELGKIGLVFNPYGGKMAEVTVNATPFPHRSKLFKIQYSVTWQENSVEIEKGFLNQANVLYSFMTGFVSKNPRNAYLNYRDVDIGVNDHGTNSYEEGEVYGRKYFGDNFDRLVKVKTAADPDNFFRNEQSIPTVLSKA

Annotated regions:
phrase: STPKPAIIVTPRSDIHVSAAVTCSKSLNFLLKIRSGGHDYEGLSYISDKPFFILDMSNLRDVSVDIADQSAWISAGATLGEVYYRIWEKSKVHGFPAGVCPTVGVGGHISGGGYGNMLRKFGLSVDNLIDAKIVDVNGQILDRKSMGEDLFWAISGGGGASFGVVLGYKVKLVP
type: DOMAIN
name: FAD-bd_PCMH
description: FAD-binding domain, PCMH-type

phrase: AYLNYRDVDIGVNDHGTNSYEEGEVYGRKYFGDNFDRLVKVKTAADPDNFFRNEQSI
type: DOMAIN
name: BBE
description: Berberine/berberine-like

phrase: PAIIVTPRSDIHVSAAVTCSKSLNFLLKIRSGGHDYEGLSYISDKPFFILDMSNLRDVSVDIADQSAWISAGATLGEVYYRIWEKSKVHGFPAGVCPTVGVGGHISGGGYGNMLRKFGLSVDNLIDAKIVDVNGQI
type: DOMAIN
name: Oxid_FAD_bind_N
description: FAD linked oxidase, N-terminal
Protein sequence:
MSMFLDTAKISVKAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFKVNEGLRTLMDFRYNRNFKAKAGEKGMTKGMHGRGAEDLIVSLPPGTTVRDATTGKVITDLVEHDQEFVVARGGRGGRGNIRFATPRNPAPEIAENGEPGEERELQLELKILADVGLVGFPSVGKSTLLSVVSAAKPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVILHVIDMSASEGRDPYDDYVSINNELETYNLRLMERPQIIVANKMDMPDSEENLAAFKEKLAANYDEFDDMPMIFPISSLAHQGLENLMDATAELLANTEEFLLYDETDMQEDEAYYGFNEDERPFEITRDDDATWVLYGDKLEKLFVMTNMERDESIMKFARQLRGMGVDEALRERGAKDGDIVRIGNFEFEFVD

Annotated regions:
phrase: DVGLVGFPSVGKSTLLSVVSAAKPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVILHVIDMSASEGRDPYDDYVSINNELETYNLRLMERPQIIVANKMDMPDSEENLAAFKEKLAANYDEFDDMPMIFPISSLAHQGLENLMD
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: DLPGLIEGASQGV
type: CONSERVED_SITE
name: GTP1-OBG_CS
description: GTP1/OBG, conserved site

phrase: DTAKISVKAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFKVNEGLRTLMDFRYNRNFKAKAGEKGMTKGMHGRGAEDLIVSLPPGTTVRDATTGKVITDLVEHDQEFVVARGGRGGRGNIRFATPRNPAPEIAENGEPGEERELQLELK
type: DOMAIN
name: GTP1_OBG_dom
description: GTP1/OBG domain

phrase: FEITRDDDATWVLYGDKLEKLFVMTNMERDESIMKFARQLRGMGVDEALRERGAKDGDIVRIGNFEFE
type: DOMAIN
name: OCT_dom
description: GTP-binding protein OBG, C-terminal

phrase: VGLVGFPSVGKSTLLSVVSA
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: KPKIGAYHFTTIVPNLGM
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: MADLPGLIEGASQGV
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: GTQFLRHIERTRVILHVI
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: FEITRDDDATWVLYGDKLEKLFVMTNMERDESIMKFARQLRGMGVDEALRERGAKDGDIVRIGNFEFEF
type: DOMAIN
name: OCT_dom
description: GTP-binding protein OBG, C-terminal

phrase: DVGLVGFPSVGKSTLLSVVSAAKPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVILHVIDMSASEGRDPYDDYVSINNELETYNLRLMERPQIIVAN
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: ADVGLVGFPSVGKSTLLSVVSAAKPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVILHVIDMSASEGRDPYDDYVSINNELETYNLRLMERPQIIVANKMDMPDSEENLAAFKEKLAANYDEFDDMPMIFPISSLAHQGLENLMDATAELL
type: DOMAIN
name: G_OBG
description: OBG-type guanine nucleotide-binding (G) domain

phrase: GFNEDERPFEITRDDDATWVLYGDKLEKLFVMTNMERDESIMKFARQLRGMGVDEALRERGAKDGDIVRIGNFEFEFV
type: DOMAIN
name: OCT_dom
description: GTP-binding protein OBG, C-terminal

phrase: ADVGLVGFPSVGKSTLLSVVSAAKPKIGAYHFTTIVPNLGMVRTKSGDSFAMADLPGLIEGASQGVGLGTQFLRHIERTRVILHVIDMSASEGRDPYDDYVSINNELETYNLRLMERPQIIVANKMDMPDSEENLAAFKEKLAANYDEFDDMPMIFPISSLAHQGLENLMDATAEL
type: DOMAIN
name: G_OBG
description: OBG-type guanine nucleotide-binding (G) domain

phrase: SMFLDTAKISVKAGRGGDGMVAFRREKYVPNGGPWGGDGGKGGSVIFKVNEGLRTLMDFRYNRNFKAKAGEKGMTKGMHGRGAEDLIVSLPPGTTVRDATTGKVITDLVEHDQEFVVARGGRGGRGNIRFATPRNPAPEIAENGEPGEERELQLELKI
type: DOMAIN
name: GTP1_OBG_dom
description: GTP1/OBG domain
Protein sequence:
MPELKVEVIPEGTVIDHIPAGKWLKVIEILGLTKPNGGTLLIASNVPSKKLGRKDIVKVEGRYLSEEEVNKIALIAPDATVNIVRDYKIVEKFKVSIPDEIVGILTCPNPNCVSNHEYVRPRFKVESREPLKLRCHYCERTIEGEEIIGNL

Annotated regions:
phrase: LKVEVIPEGTVIDHIPAGKWLKVIEILGLTKPNGGTLLIASNVPSKKLGRKDIVKVEGRYLSEEEVNKIALIAPDATVNIVRDYKIVEKFK
type: DOMAIN
name: Asp_carbamoyltransf_reg_N
description: Aspartate carbamoyltransferase regulatory subunit, N-terminal

phrase: EIVGILTCPNPNCVSNHEYVRPRFKVESREPLKLRCHYCERTIEGEE
type: DOMAIN
name: Asp_carbamoyltrfase_reg_C
description: Aspartate carbamoyltransferase regulatory subunit, C-terminal
Protein sequence:
MNHAKVNQHPGQATLPETAEGQVRTYEVKTYGCQMNVHDSERLSGLLEEAGYVAAPEDTTPDLVVFNTCAVRENADMRLYGTLGNLRSVKEKNPGMQIAVGGCLAQKDKDTVVKKAPWVDVVFGTHNIGSLPTLLQRAEHNAQAEVEIVDSLEQFPSVLSAKRESAYAGWVSVSVGCNNTCTFCIVPSLRGKEQDRRPGDILAEVQALVDQGVTEVTLLGQNVNAYGVNFVDPELERDRSAFSKLLRACGEIEGLERVRFTSPHPAEFTSDVIDAMAETPNICPQLHMPLQSGSDKVLKEMRRSYRSKKFLSILDEVRAKIPHASITTDIIVGFPGETEEDFQATLDVVKKARFTSAYTFQYSPRPGTPAAEYENQLPKEVVQERYERLMVVQEQVCEEENQKLIGTTVELLVQAGGGRKNDATKRMSGRARDGRLVHFAPEGDIDGEIRPGDFVTVTVTEAKPFFLIADSGVQTHRRTKAGDNSAVGQVPTTAPIGVGLGLPQIGAPKVAPATESACCSIN

Annotated regions:
phrase: QKLIGTTVELLVQAGGGRKNDATKRMSGRARDGRLVHFAPEGDIDGEIRPGDFVTVTVTEAKPFFLIADSG
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: QVRTYEVKTYGCQMNVHDSERLSGLLEEAGYVAAPEDTTPDLVVFNTCAVRENADMRLYGTLGNLRSVKEKNPGMQIAVGGCLAQKDKDTVVKKAPWVDVVFGTHNIGSLPTLLQRAEHNAQAEVEIVDSLEQFPSVLSAKRESAYAGWVSVSVGCNNTCTFCIVPSLRGKEQDRRPGDILAEVQALVDQGVTEVTLLGQNVNAYGVNFVDPELERDRSAFSKLLRACGEIEGLERVRFTSPHPAEFTSDVIDAMAETPNICPQLHMPLQSGSDKVLKEMRRSYRSKKFLSILDEVRAKIPHASITTDIIVGFPGETEEDFQATLDVVKKARFTSAYTFQYSPRPGTPAAEYENQLPKEVVQERYERLMVVQEQVCEEENQKLIGTTVELLVQAGGGRKNDATKRMSGRARDGRLVHFAPEGDIDGEIRPGDFVTVTVTEAKPFFLIA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: YAGWVSVSVGCNNTCTFCIVPSLRGKEQDRRPGDILAEVQALVDQGVTEVTLLGQNVNAYGVNFVDPELERDRSAFSKLLRACGEIEGLERVRFTSPHPAEFTSDVIDAMAETPNICPQLHMPLQSGSDKVLKEMRRSYRSKKFLSILDEVRAKIPHASITTDIIVGFPGETEEDFQATLDVVKKARFTSAYTFQYSPRPGTPAAEYENQLPKEVVQERYE
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: VSVSVGCNNTCTFCIVPSLR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: RTYEVKTYGCQMNVHDSERLSGLLEEAGYVAAPEDTTPDLVVFNTCAVRENADMRLYGTLGNLRSVKEKNPGMQIAVGGCLAQKDKDTVVKKAPWVDVVFGTHNIGSLPTLLQRAE
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: YEVKTYGCQMNVHDSERLSGLLEEAGYVAAPEDTTPDLVVFNTCAVRENADMRLYGTLGNLRSVKEKNPGMQIAVGGCLAQKDKDTVVKKAPWVDVVF
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: RESAYAGWVSVSVGCNNTCTFCIVPSLRGKEQDRRPGDILAEVQALVDQGVTEVTLLGQNVNAYGVNFVDPELERDRSAFSKLLRACGEIEGLERVRFTSPHPAEFTSDVIDAMAETPNICPQLHMPLQSGSDKVLKEMRRSYRSKKFLSILDEVRAKIPHASITTDIIVGFPGETEEDFQATLDVVKKARFTSAYTFQYSPRPGTPAAEYENQLPKEVVQERYERLMVVQEQVCE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VSVSVGCNNTCTFCIVPSLRGKEQDRRPGDILAEVQALVDQGVTEVTLLGQNVNAYGVNFVDPELERDRSAFSKLLRACGEIEGLERVRFTSPHPAEFTSDVIDAMAETPNICPQLHMPLQSGSDKVLKEMRRSYRSKKFLSILDEVRAKIPHASITTDIIVGFPGETEEDFQATL
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MENKLNIVIITGMSGAGKTVAIQSFEDMGYFTVDNMPPNLIEKFVGLLNTPDNKIDKVALVVDMRSRAFFEDIQSIVTELTDNGSVNFKLLFLDANDTELVSRYKETRRSHPLAIDGRTLDGITKEREILADLKNLSEVVIDTSELTPRNLRARILQKFASSTESTFRIEVMSFGFKYGLPLDADLVFDVRFLPNPHYITELRDKNGTDKEVYDYVMEHPQSEEFYENLMKMLVPILPAYKKEGKSVLTIAFGCTGGQHRSVAFAERVSAALKDKWHLNVSHRDKDRRKETVNRS

Annotated regions:
phrase: RIEVMSFGFKYGLPLDADLVFDVRFLPNPHYITELRDKNGTDKEVYDYVMEHPQSEEFYENLMKMLVPILPAYKKEGKSVLTIAFGCTGGQHRSVAFAERVSAALKDKWHLNVSHRD
type: DOMAIN
name: RapZ_C
description: RapZ, C-terminal domain

phrase: NIVIITGMSGAGKTVAIQSFEDMGYFTVDNMPPNLIEKFVGLLNTPDNKIDKVALVVDMRSRAFFEDIQSIVTELTDNGSVNFKLLFLDANDTELVSRYKETRRSHPLAIDGRTLDGITKEREILADLKNLSEVVIDTSELTPRNLRARILQKFA
type: DOMAIN
name: RapZ-like_N
description: RapZ-like, N-terminal domain
Protein sequence:
MAAVQVVGSWPSVQPREAPREAIPERGNGFRLLSARLCALRPDDSSSARTEIHLLFDQLISENYSEGSGVAPEDVSALLVQACRLVPLNQNHLVSKVSQLIHHLLNRLQVIVDEQHLDFLLAYTISAIHQCSSWTHREILQALAALVYCNGSKCQKYLPELLGNTGLLMKLSDLAQSDPEVRRAAVHCMANLCLSVPGQPYLEEPYQNVCFQAFLTILQSPKSSDMDDITFCMLLQNALKGIQSLLNGGRMKLTQTDELGALLAVLKKFMFHGLPGLNIEMPTVLYPTPLPQYDGRTPIKPQQSESSASRPTLNKKKKSKVKPKKIQQGEEEEKESSGEIEAAPVTGTGRVNLHEGNTWCPSSLGVQSLPLDGSGAAEKDGVSSSFSSSSWKRVSSSESDFSDAEGGMQSKMRSYQAKVRQGALVCFLSTIKSIEKKVLYGYWSAFIPDTPELGSPQSVSLMTLTLKDPSPKTRACALQVLSAILEGSKQFLSVAEDTSDHRRAFTPFSVMIACSIRELHRCLLLALVAESSSQTVTQIIKCLANLVSNAPYDRLKLSLLTKVWNQIKPYIRHKDVNVRVSSLTLLGAIVSTHAPLPEVQLLLQQPCSSGLGNSNSATPHLSPPDWWKKAPAGPSLEETSVSSPKGSSEPCWLIRLCISIVVLPKEDSCSGSDAGSAAGSTYEPSPMRLEALQVLTLLARGYFSMTQAYLMELGEVICKCMGEADPSIQLHGAKLLEELGTGLIQQYKPDSTAAPDQRAPVFLVVMFWTMMLNGPLPRALQNSEHPTLQASACDALSSILPEAFSNLPNDRQMLCITVLLGLNDSKNRLVKAATSRALGVYVLFPCLRQDVIFVADAANAILMSLEDKSLNVRAKAAWSLGNLTDTLIVNMETPDPSFQEEFSGLLLLKMLRSAIEASKDKDKVKSNAVRALGNLLHFLQPSHIEKPTFAEIIEESIQALISTVLTEAAMKVRWNACYAMGNVFKNPALPLGTAPWTSQAYNALTSVVTSCKNFKVRIRSAAALSVPGKREQYGSVDQYARIWNALVTALQKSEDTIDFLEFKYCVSLRTQICQALIHLLSLASASDLPCMKETLELSGNMVQSYILQFLKSGAEGDDTGAPHSPQERDQMVRMALKHMGSIQAPTGDTARRAIMGFLEEILAVCFDSSGSQGALPGLTNQ

Annotated regions:
phrase: KVRQGALVCFLSTIKSIEKKVLYGYWSAFIPDTPELGSPQSVSLMTLTLKDPSPKTRACALQVLSAILEGSKQFLSVAEDTSDHRRAFTPFSVMIACSIRELHRCLLLALVAESSSQTVTQIIKCLANLVSNAPYDRLKLSLLTKVWNQIKPYIRHKDVNVRVSSLTLLGAIVSTHAPLPE
type: DOMAIN
name: DUF4042
description: Domain of unknown function DUF4042
Protein sequence:
MTTIESKCSIDGILLLNKPQGMTSNAALQKAKHLFGAKKAGHTGSLDPLATGMLPLCFGEATKICQYLLNADKSYETIGRLGSKTNTADCTGEVIFCIENYTVSHEELIATLEKYKGKTKQIPSMFSALKHKGTPLYRLAREGIEIERKARDIVISQLKLEQFDGECFTLTVSCSKGTYIRNLVEDIGDTLKAGAHMTKLHRLYTAGFENNRMYTLDELQDMPLSQRLACLIPIDQAVQHLTPVILSDSEVTAIRQGKVISNKTSAVEGEDLRLYGEQSQFIGIGQALIHGDIKAKRLVSFAL

Annotated regions:
phrase: PVILSDSEVTAIRQGKVISNKTSAVEGEDLRLYGEQSQFIGIGQALIHGDIKAKRL
type: DOMAIN
name: tRNA_sdUridine_synth_fam1_C
description: tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal

phrase: KHLFGAKKAGHTGSLDPLATGMLPLCFGEATKICQYLLNADKSYETIGRLGSKTNTADCTGEVIFCIENYTVSHEELIATLEKYKGKTKQIPSMFSALKHKGTPLYRLAREGIEIERKARDIVISQLKLEQFDGECFTLTVSCSKGTY
type: DOMAIN
name: PsdUridine_synth_N
description: Pseudouridine synthase II, N-terminal

phrase: RNLVEDIGDTLKAGAHMTKLHRLYTAGFENNRMYTLDELQDMPLSQRLACLIPIDQA
type: DOMAIN
name: TruB_C
description: tRNA pseudouridylate synthase B, C-terminal
Protein sequence:
MWVLALGGAFLAVAKACIFCRLQDHALANRLAQLNNQTKPKWKWKEWASPDFSAFALDEVSMKQVTEKTHRVLRVIEKKGSTSLIPLYWQWLQKTRIPQYTREALCAPVCRGSTILYNCSTCEGKEESCWPQKHCYPDSHDLWDARILLLCIFGIVLLSGVVSLQVEYLNLQAKDL

Annotated regions:
Protein sequence:
MSCLPALDKFLQNYHQSYLSTLGELPRYYPQGEPSLCIQGEFDESSDEAVSWLPVKREQLGSFANVEHALELTLWPDINHFYGEYFAAPVLFDSPWGTGELLQVWNEADFDALQQNIIGHLMMKQKLKQPATWFIGLLDEGDKMLTVDNADGSVWVEIPGELPSTQLAPSLAEFIEALSPRIAPPVKHEELPMPALEHPGIFASFKRMWHNLIGKR

Annotated regions:
Protein sequence:
MSCILTALCKKGQANLNSLIKLQNKKVKNYYVKNNETAIDKMLCIAADIKGQVEQLELVNQYLGAPESEKLDFVYDCSDLDINEKDLKSLCLTKNIAYFTQKYNAPTVLKAQAAVYDSFIKHSELFINAICQMDEKQQVNNFCLDELVKLKLIAIKHLCALEYVIENSI

Annotated regions:
Protein sequence:
MTELQSALLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKSQETAFE

Annotated regions:
phrase: QSALLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKSQ
type: DOMAIN
name: UBQ-conjugat_E2_core
description: Ubiquitin-conjugating enzyme E2, catalytic core domain

phrase: WHPNVDKNGDVCISI
type: ACTIVE_SITE
name: UBQ-conjugating_AS
description: Ubiquitin-conjugating enzyme, active site

phrase: LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVAR
type: DOMAIN
name: UBQ-conjugat_E2_core
description: Ubiquitin-conjugating enzyme E2, catalytic core domain