nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MALWGWRGVGRRPTFFVFASLAPIGRDFLRRNGDDARMMGHLEKLLAPTLDAMGYEVVRVTLLGSQNPTLQVMAERLDGVAMTVSDCETISRALGALLDVEDPIAGRYSLEISSPGIDRPLTRPKDYARFAGHEARIETDRLIEGHRRMKGLLLGIDEDRTVRLRLIEGKAAEDGTLPEVEIPFGAIVKAKLLLTDALIAKALKDAEALADEGEAAGGAVEGGVA

Annotated regions:
phrase: LLAPTLDAMGYEVVRVTLLGSQNPTLQVMAERLDGVAMTVSDCETISRALGALLDVEDPIAGRYSLEISSPGI
type: DOMAIN
name: RimP_N
description: Ribosome maturation factor RimP, N-terminal

phrase: GIDRPLTRPKDYARFAGHEARIETDRLIEGHRRMKGLLLGIDEDRTVRLRLIEGKAAEDGTLPEVEIPFGAIVKAK
type: DOMAIN
name: RimP_C
description: Ribosome maturation factor RimP, C-terminal

phrase: LTRPKDYARFAGHEARIETDRLIEGHRRMKGLLLGIDEDRTVRLRLIEGKAAEDGTLPEVEIPFGAIVKAKLLL
type: DOMAIN
name: RimP_C
description: Ribosome maturation factor RimP, C-terminal
Protein sequence:
MGLRMKSATGLLVILLIAFALQLVAVLSVPVTKTISLGSYQDHKFGVFGYCNVKDGTCSPAGVGYNLVDSDNAGFSLPSNARHTLSNLLIVHPIATGFTLILTVLAMLAHIQGPASSSRYLLFCLVFSLPTFLLVLLSFLVDILLFVPHLDWGGWIVLAATILVAISGVVLCVMRRTLSSKKAMKKHQLDTTNELSAFSSHKHLNSFTYSSKENVPQFSELRYETSHDTSKDEEVLPLTSHVYEEPGHHVGDTSYASQGTNNSRVNLLTSEEPQAPKRESPFKDQRQDRYTPDRYGPSPDRYDQGGPGRPPNGSRGVPPRRPSNGPTPPGQGPSPTGAYGRNNNPNYNGGYNNRLPRPRGPPGSNNSSPFLGARNGPGLTPPHNLQTATTGPMQLPAGTYLPGEEPANSPDTYGPGVIPIPEIRRESKVPGASPTPPPVSGNSPPTETSESGVSRPYRGNYSRRGSEASAQTPPNAQPNPPPGGAQNYEYVPARQQWNLTTEESNATAPAPGPQPLQRNHSYDTYNPYRSETPSAPGSRAQSQGTDDNLGTLHQPVPTTVTPSNSGALNNKDSPWYSPPVDEQFRNSFIPDAPVSPSESISSNFTSVSQRGINPRYFGADGPPGGLHQGAPPPPHMRGPPPHMGMGGPNMGGHNMGGHNMGGPPPNMGPRPPYGGGGPGHGNKHDLLLSGNPDSQFQPQTRRKPGRGGRPGMSPASLMGRDTGPYSMR

Annotated regions:
Protein sequence:
MPPKKHSGFMMFVNEWRDNNPEGRNLSIAQAVSRCGSIWEKMTAQQRGPYNSGAKNADVLTRVKKERLNCHGQVLSQVELEEREMAESQIHMKRCTERIVMDAKRSHDLENTKFVFVAFNYFTKAFTTDVYVPAEFSASEYSFNEGIMSVYSTLIDPGQIIFGQGSDAQHHSSTTHNLPLPPNALGEKNMGKLYRNILEYLSKIQEGKDATKPFVVFTKTDMVPFVKSCFRYLACENQDGSYENGDQIQVLDIQYLLFIQKKEVLDIAGVSDEKINLYVTDAYFLKDFFEFTPEISCQYHEENDRSKYCTQSLVMRWAYTFSDYMCSDLAISVQPGKHIPPKTKPNYRVIPANSSVHESSFDSFYSIPASCEKKEDSPTVLSPASSRRSLASSPYVPTDHTSFVGDLNKKDEFPSLDQRNKLAALIDLIQFFYRCPVQLCRPLFSAGYHLNDALEPPHDPRDLYGRPL

Annotated regions:
phrase: KAFTTDVYVPAEFSASEYSFNEGIMSVYSTLIDPGQIIFGQGSDAQHHSSTTHNLPLPPNALGEKNMGKLYRNILEYLSKIQEGKDATKPFVVFTKTDMVPFVKSCFRYLACENQDGSYENGDQIQVLDIQYLLFIQKKEVLDIAGVSDEKINLYVTDAYFLKDFFEFTPEISCQYHEENDRSKYCTQSLVMRWAYTFSDYMCSDLAISVQPGKHIPPKT
type: DOMAIN
name: Maelstrom
description: Maelstrom domain
Protein sequence:
MGGKWSKSSIVGWPKVRERIRQTPVRAKGVGAVSQDLDRHGAITSSNTAATNADVACLEAQEEDEVGFPVKPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIYSKKRQEILDLWVYHTQGYFPDWQNYTPGPGIRFPLTFGWCFKLVPMDPDEVEKANEGENNSLLHPVCQHGMDDEDREVLVWRFDSSLAFRHRAHELHPEFYKDC

Annotated regions:
Protein sequence:
MAQPKITINNLNFYYGSNRALKDVNLEIQAHAVTALIGPSGCGKSTFLRTLNRLNDLIDGVRISGEILLDGQNIYAPEVDVVALRKRVGMVFQRPNPFPMSIYDNIAYGPRIHGITSRRELDGIVERSLKAAALWDEVAGRLRHSALGLSGGQQQRLCIARLLAVEPEVVLMDEPSSALDPISTLKIEELIHNLKEKYTIVIVTHNMQQAARVSDYTAFFLNGEMVEYDETEIIFTKPRDKRTEDYITGRFG

Annotated regions:
phrase: ITINNLNFYYGSNRALKDVNLEIQAHAVTALIGPSGCGKSTFLRTLNRLNDLIDGVRISGEILLDGQNIYAPEVDVVALRKRVGMVFQRPNPFPMSIYDNIAYGPRIHGITSRRELDGIVERSLKAAALWDEVAGRLRHSALGLSGGQQQRLCIARLLAVEPEVVLMDEPSSALDPISTLKIEELIHNLKEKYTIVIVTHNMQQAARVSDYTAFFLNGEMVEYDETEIIFTKPRDKRTEDY
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: LSGGQQQRLCIARL
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: AHAVTALIGPSGCGKSTFLRTLNRLNDLIDGVRISGEILLDGQNIYAPEVDVVALRKRVGMVFQRPNPFPMSIYDNIAYGPRIHGITSRRELDGIVERSLKAAALWDEVAGRLRHSALGLSGGQQQRLCIARLLAVEPEVVLMDEPSSALDPISTLKIEELIHNLKEKYTIVIVTHNMQQAARVSDYTAFFLNGEMVEYDETEIIFTKP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LKDVNLEIQAHAVTALIGPSGCGKSTFLRTLNRLNDLIDGVRISGEILLDGQNIYAPEVDVVALRKRVGMVFQRPNPFPMSIYDNIAYGPRIHGITSRRELDGIVERSLKAAALWDEVAGRLRHSALGLSGGQQQRLCIARLLAVEPEVVLMDEP
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain
Protein sequence:
MPLLNSVTTPYAEALLQVVSENDQTEEMVKEVKQLLSLINDSPDLEKTLSSPVLETDTKKKIIIEIFSEKINSSLLNFLKLLADRQRIGIVTSILDRFLEIYRENSNIALATVTSAVELTDDQKGLITKKIINIAGTEKLELVTKIDPSLIGGFVASVGSKVIDASLASQIRKLGLSLSK

Annotated regions:
Protein sequence:
MMTQSIRRSMLTVMATLPLLFSSATLHAQANSVQQQLEALEKSSGGRLGVALINTADNSQILYLADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKASDLVNYNPIAEKHVNGTMTLAELGAGALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLNSAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKCWVVGDKTGSGDYGTTNDIAVIWPENHAPLVLVTYFTQPEQKAESRRDVLAAAAKIVTHGF

Annotated regions:
phrase: FAMCSTSKVMAAAAV
type: ACTIVE_SITE
name: Beta-lactam_class-A_AS
description: Beta-lactamase, class-A active site

phrase: VALINTADNSQILYLADERFAMCSTSKVMAAAAVLKQSESDKHLLNQRVEIKASDLVNYNPIAEKHVNGTMTLAELGAGALQYSDNTAMNKLIAHLGGPDKVTAFARSLGDETFRLDRTEPTLNSAIPGDPRDTTTPLAMAQTLKNLTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKCWVVGDKTGSGDYGTTNDIAVIWPENHAPLVLV
type: DOMAIN
name: Beta-lactam_cat
description: Beta-lactamase class A, catalytic domain
Protein sequence:
MVSKRSRLDFEDKETLAEDASKIMKQPLSKLAKKSCGSHEVEENGSVFVRLLKASGLTLKTGDNQNQLGVDQIIFQRKLFQALRKHPSYPKVIEEFVNGLESYTEDIDSLRNCLLSCERLQDEEASMGTFYSKSLIKLLLGIDILQPAIIKMLFEKVPQFLFESESRDGISMPRLIISQLKWLDRIVDSKDLTTQMMQLISVAPVNLQHDFITSLPEILGDSQHANVGKELSELLVQNTSLTVPILDVFSSLRLDPNFLSEIRQLVMGKLSSVRLEDLPVIVKFILHSVTDSTSLEVIAELREKLNVQHFTLPSRIQASQSKLKSKGLASSSGNQENSDKDCIVLLFDVIKSAIRYEKTISEAWIKAIERIQSAAEHKALDVAMLLIIYGTSTQTKKGVERLLRNKIQSDCIQEQLLDSTFSTHCLVLKDICPSILLLAQTLFHSQDQRIILFGSLLCKYAFKFFDTYCQQEVVGALVTHVCSGNEAEVDAALDVLLELIVLNASAMRLNAAFIKGILDYLENMSPQQIRKIFCILSTLAFSQQPGTSNHIQDDMHLVIRKQLSSTVFKYKLIGIIGAVTMAGIMAEDRTMPSNSTQRSASVSSEQHTQVTSLLQLVHSCTEHSPWASSLYYDEFANLIQERKLAPKTLEWVAQTIFNDFQDAFVVDFCAVPEGDFPFPVKALYGLEECNTQDGIVINLLPLFFQEFAKDVSQVTSQESSQKSMSPLCLASHFRLLRLCVARQHNGNLDEIDALLDCPLFLPDLEPGEKLESMSAKDRSLMCSLTFLTFNWFREVVNAFCQQTSPEMKGKVLSRLKDLVELQEILEKYLAVIPDYVPPFTSVDLDTLDVIPRSNSAVAAKSRHKGKTGGKKQKADSSTASCTDTLLTEDTSECDVAPSGKSQVDKESTGKEGKTFVSLQNYRAFFRELDIEVFSILHSGLVTKFILDTEMHTEATEVVQLGPAELLFLLEDLSQKLENRLTPSFTKRVCFFKNKGSRNIGFSHLHQRSVQDIVHCVVQLLTPMCNHLENIHNFFQCLGAENLSVNDKARVTAQEHYTMSSCYQKLLQVFHALLAWKGFTHQSNHRLLRSALEVLASRLKQTEEGQPLEELLSQSFSYLQNLQHSIPSFQCGLYLLRLLMALLEKSAVPTQKKEKLASLAKQLLCRAWPHGDKEKNPTFNDHLHDLLCIYLEHTDNVLKAIEEITGVGVPELVNAPKDASSSTFPTLTRHTFVIFFRVMMAELEKTVKGLQAGTATDSQQVHEEKLLYWNMAVRDFSILINLMKVFDSYPVLHVCLKYGRRFVEAFLKQCMPLLDFSFRKHRDDVLSLLQTLQLNTRLLHHLCGHSKIHQDTRLTKHVPLLKKSLELLVCRVKAMLVLNNCREAFWLGTLKNRDLQGEEIISQHPSSPENTSEDSEDGMTSYVSRNRAIEDGEDEANDGQDRDSDESDDSSS

Annotated regions:
Protein sequence:
MSLFDTINAGGAELLGFAWPTVWAVVRILVVSVVILLCVAYLILWERKLIGWMHVRLGPNRVGPGGLLQPIADVLKLLLKEVIQPSAASRWLYLIAPVMTVVPAFAVWAVIPFQAEAVLANVNAGLLYAMAISSIGVYAVILAGWASNSKYAFLGAMRAAAQMVSYEISMGFALVLVLMTAGSLNLSEIVGSQQHGFFAGHGVNFLSWNWLPLLPAFVVYFISGIAETNRHPFDVVEGESEIVAGHMIDYSGMAFALFFLAEYINMIVISALAATLFLGGWDAPFEFLSFIPGIFWLVLKVFALLSVFIWVRATFPRYRYDQIMRLGWKVFLPVTVVWVIVVGFWMMSPLNIWVK

Annotated regions:
phrase: PFDVVEGESEIVA
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_su1_CS
description: NADH:ubiquinone oxidoreductase, subunit 1, conserved site
Protein sequence:
MDSLALAPQVYSRKDKSLGVLVANFLTLYNRPDVDLFGLDDAAAKLGVERRRIYDVVNILESIGLVARSGKNQYSWKGFGAVPRALSELKEEGMKEKFAIVPFVAKSEMVVYEKEGEESFMLSPDDQEFSPSPRPDNRKERTLWLLAQNFVKLFLCSDDDLVTFDSATKALLNESQDMNMRKKVRRLYDIANVFSSMKLIEKTHVPETKKPAYRWLGSKTIFENRFIDGSASLCDRNVPKKRAFGTELTNVNAKRNKSGCSKEDSKRNGNQNTSIVIKQEQCDDVKPDVKNFASGSSTPAGTSESNDMGNNIRPRGRLGVIEALSTLYQPSYCNPELLGLFAHYNETFRSYQEEFGREK

Annotated regions:
phrase: RKDKSLGVLVANFLTLYNRPDVDLFGLDDAAAKLGVERRRIYDVVNILESIGLVARSGKNQYSWK
type: DOMAIN
name: E2F_WHTH_DNA-bd_dom
description: E2F/DP family, winged-helix DNA-binding domain

phrase: RKERTLWLLAQNFVKLFLCSDDDLVTFDSATKALLNESQDMNMRKKVRRLYDIANVFSSMKLIEKTHVPETKKPAYRWL
type: DOMAIN
name: E2F_WHTH_DNA-bd_dom
description: E2F/DP family, winged-helix DNA-binding domain

phrase: KERTLWLLAQNFVKLFLCSDDDLVTFDSATKALLNESQDMNMRKKVRRLYDIANVFSSMKLIEKTHVPETKKPAYRWL
type: DOMAIN
name: E2F_WHTH_DNA-bd_dom
description: E2F/DP family, winged-helix DNA-binding domain

phrase: KDKSLGVLVANFLTLYNRPDVDLFGLDDAAAKLGVERRRIYDVVNILESIGLVARSGKNQYSWK
type: DOMAIN
name: E2F_WHTH_DNA-bd_dom
description: E2F/DP family, winged-helix DNA-binding domain
Protein sequence:
MATLSVKPSQRFQLPDWHTNSYLLSTNAQLQRDASHQIRQEARVLRNETNNQTIWDEHDNRTRLVERIDTVNRWKEMLDKCLTDLDAEIDALTQMKDSAGQNLQAKNLPLDVAIECLTLRESRRDIDVVKDPVEDELHKEVEVIEATKKALQQKVSQAFEHLCLLQEVRQQLNSDHRGKMETLEIDRGCLSLNLRSPNISLKVDPTRVPDGSTTLQQWDDFSQFNKDRGEAEMKAATELREAIALTIAETNNELEAQRVATEFAFRKRLREMEKVYSELKWQEKNTLEEIAELQEDIRHLEEDLRTKFLSLKLSHTRLEARTYRPNVELCRDQAQYGLTDEVHQLEATIAALKQKLAQAQDALDALYKHLARLQADIACKANSMLLDTKCMDTRRKLTVPAEKFVPEVDTFTRTTNSTLSPLKSCQLELA

Annotated regions:
Protein sequence:
MSIEIFLVLVVALIIDRLVGDPDWLWERLTHPVVFFGKAIGVFDEALNRGADGGWLKMRGVATILILLAASILLGVVLNRLFDVLGAVGFILEAITVAVFLAQKSLADHVRRVADGLRSNGLEGGREAVSMIVGRDPKTLDEPGVCRAAIESLAENFSDGVVAPALWYAVAGLPGLLAYKMLNTADSMIGHKSPKYLHFGWASARLDDLANLPAARLSVFLIAAGARFKRGVEAAKAAIDVAKRDHGFHRSPNSGWPEAAMAGALDIQLAGPRVYGGVTVDEPMINGAGRAIATADDIDAAVAVFYRACTTLAAASAVLVLPFLLL

Annotated regions:
Protein sequence:
MVAPLLVFLFSLQLCHTTSWAYVGGNSLNSNSLHASYSEFPAGTSNEVPEDAANGQDDNDDSQLTEPNDNNAPLVQSIDDETEMQFPKPIQWVSIDHLRNSIILRFQNPTPKILNKLDPEEMKRLRSLQENAMRWGKRSYESYPLNRNGLADKSSVGRMGFLSNHQVIRDSRGDNFMRFGRSVGGSGGNDDNFMRFGRASGSSDFMRFGRAGQDNFMRFGRAAGQDFMRFGRGSGQDFMRFGRSPGSQDFMRFGRNPGSQDFMRFGRSPGSQDFMRFGRNPGSQDFMRFGRNPGSQDFMRFGRNPGSQDFMRFGRASGGQDFMRFGRAPSGQDFMRFGRPDNFMRFGRTPAQSSDFMRFGRTPTQSSDFMRFGKSLDKSENKTSDLQK

Annotated regions:
Protein sequence:
MMTQANAYFYNGADVALLNGQYTDVFSLLGMHTSEDGKSLIVRCFLRNALKVDVISIKDGRRVAGLEKVNDAGLFAGTMGRRVKPFLYLLRIQYPLSQIEIVDPYQFGPLLNADDLYLFGEGSAERAYEFLGANWRDVEGIEGVHFCVWAPNAKRVSVVGDFNHWDDTRHVMRQHMANGLWEIFLPNVAEGAHYKFDLVHPNGERHAKSDPMATQMECAPHNASIVPKKSKHSWKDTLWMNKRAVTAWHKAPMAIYEVHLGSWRRKGDNGEQYLDYQDLIEQLIPYVKAQSFTHIELMPISEYPFDGSWGYQPVGLYAPTHRFGDANGLKAFVDACHQADIGVVLDWVAAHFPKDPHGLVRFDGTCLYEHEDPRKGTHPDWDTLIYNYGRGEVRSFLLSNACYWLREFHFDGLRIDAVSSMLYLDYSREPGQWLPNAYGGRENLEAISFLQMLNQRLYQAFPGICMIAEESTAFAGVTKPTDHHGLGFGFKWNMGWMNDSLSYLSRDPIYRQYHHHQLTFSLMYAYTEQFMLSVSHDEVVHGKGSLLHKIPGDDWQKFATLRAYYGFMWGHPGKKLLFMGSEFAQRDEWDHNHSLDWHLLAFEPHQGVQRWLKDLNQLYQGMSALSVLDYQPAGFRWLDCDNGSASIFTFVRYGLAGDAPLVFVINMTPSVHHGFRIGLPQAGDFCEYLNSDSYLYGGSNQGNAGLVVAQNQSWQGMESSALITVPPLSCLVLGPVANQVEAKRR

Annotated regions:
phrase: EVHLGSWRRKGDNGEQYLDYQDLIEQLIPYVKAQSFTHIELMPISEYPFDGSWGYQPVGLYAPTHRFGDANGLKAFVDACHQADIGVVLDWVAAHFPKDPHGLVRFDGTCLYEHEDPRKGTHPDWDTLIYNYGRGEVRSFLLSNACYWLREFHFDGLRIDAVSSMLYLDYSREPGQWLPNAYGGRENLEAISFLQMLNQRLYQAFPGICMIAEESTAFAGVTKPTDHHGLGFGFKWNMGWMNDSLSYLSRDPIYRQYHHHQLTFSLMYAYTEQFMLSVSHDEVVHGKGSLLHKIPGDDWQKFATLRAYYGFMWGHPGKKLLFMGSEFAQRDEWDHNHSLDWHLLAFEPHQGVQRWLKDLNQLYQGMSAL
type: DOMAIN
name: Glyco_hydro_13_cat_dom
description: Glycosyl hydrolase, family 13, catalytic domain

phrase: LGANWRDVEGIEGVHFCVWAPNAKRVSVVGDFNHWDDTRHVMRQHMANGLWEIFLPNVAEGAHYKFDLVHPNGERHAKSDPM
type: DOMAIN
name: Glyco_hydro_13_N
description: Glycoside hydrolase, family 13, N-terminal

phrase: LDYQDLIEQLIPYVKAQSFTHIELMPISEYPFDGSWGYQPVGLYAPTHRFGDANGLKAFVDACHQADIGVVLDWVAAH
type: DOMAIN
name: Glyco_hydro_13_cat_dom
description: Glycosyl hydrolase, family 13, catalytic domain

phrase: WLDCDNGSASIFTFVRYGLAGDAPLVFVINMTPSVHHGFRIGLPQAGDFCEYLNSDSYLYGGSNQGNAGLVVAQNQSWQGMESSALITVPPLSCLVL
type: DOMAIN
name: A-amylase/branching_C
description: Alpha-amylase/branching enzyme, C-terminal all beta

phrase: ERAYEFLGANWRDVEGIEGVHFCVWAPNAKRVSVVGDFNHWDDTRHVMRQHMANGLWEIFLPNVAEGAHYKFDLVHPNGERHAKSDPMATQMECAPHNASI
type: DOMAIN
name: GlgB_N_E_set_prok
description: Glycogen branching enzyme GlgB, N-terminal Early set domain

phrase: ALLNGQYTDVFSLLGMHTSEDGKSLIVRCFLRNALKVDVISIKDGRRVAGLEKVNDAGLFAGTMGRRVKPFLYLLRIQYPLSQIEIVDP
type: DOMAIN
name: GlgB_N
description: 1,4-alpha-glucan branching enzyme GlgB, N-terminal domain
Protein sequence:
MSDHEGASPASSAPSSPLVPVSPRSDHNAPESPSGDVADLYKDDDSPLAPRSPASPRKSPENSPVGSPVKTTKVVISSDEDSDDEGPSSKKQRAVLSDSDASDTEATTKKSRITLDSDDSDQEGDKQQKRKDLFGDDSDDDDFDRPKKQNDDLDELVKGDLEEDRGEQQRPIYDSDDDDGPSDRRGGRNFEWDFDKMLAEKKAERKRKTRRGKDGGIDIINDDDGMVAKLVEKMKHAAKSDRNANVERKPAFQKIKMLPEVKAIMLRAGIVEVLIENGFMSALSEWLAPLPDKCLPALDIRITVLKLLHNPRFWKLDRSTLKQSGLGKAVMMLYKHPNETKENKAIANKLIGEWARPIYHLDTDYSTVSRQEREERDYSRMPEKRKKKLHSREEEPDEDEAPKRPRIRDAEGLGPTKSLDLKPGDKGYINRARVPKPSTKDYVIRPEWRVSGEFKGEKKASGSKRYDQTLRDFQERTRKSKANRLVKVSLEGRNMGI

Annotated regions:
phrase: SALSEWLAPLPDKCLPALDIRITVLKLLHNPRFWKLDRSTLKQSGLGKAVMMLYKHPNETKENKAIANKLIGEWARPIYH
type: DOMAIN
name: TFIIS_N
description: Transcription factor IIS, N-terminal

phrase: LDRSTLKQSGLGKAVMMLYKHPNETKENKAIANKLIGEWARP
type: DOMAIN
name: TFIIS_N
description: Transcription factor IIS, N-terminal
Protein sequence:
MPHASQLSLQEAMGPTMEEVIFLHDHVLLLTCLMTMVITMFTLTATTTALTHNDPTEEVEQLEAAWTVAPIMILILTALPSVRSLYLMEEVFNPYLTIKATGHQWYWNYEYSDGVKISFDSYMIQTKDLQNGSPRLLEVDHRMVMPAGLQTRVVVTAEDVLHSWTIPSLGVKVDAVPGRLNQLPLATSRVGVFYGQCSEICGANHSFMPIAMEATPLHHFEQWLISEQ

Annotated regions:
phrase: HASQLSLQEAMGPTMEEVIFLHDHVLLLTCLMTMVITMFTLTATTTALTHNDPTEEVEQLEAAWTVAPIMILILTALPS
type: DOMAIN
name: Cyt_c_oxidase_su2_TM_dom
description: Cytochrome C oxidase subunit II, transmembrane domain

phrase: MPHASQLSLQEAMGPTMEEVIFLHDHVLLLTCLMTMVITMFTLTATTTALTHNDPTEEVEQLEAAWTVAPIMILILTALPSVRSLYLMEEV
type: DOMAIN
name: Cyt_c_oxidase_su2_TM_dom
description: Cytochrome C oxidase subunit II, transmembrane domain

phrase: NPYLTIKATGHQWYWNYEYSDGVKISFDSYMIQTKDLQNGSPRLLEVDHRMVMPAGLQTRVVVTAEDVLHSWTIPSLGVKVDAVPGRLNQLPLATSRVGVFYGQCSEICGANHSFMPIAMEATPLHHFEQWLI
type: DOMAIN
name: CcO_II-like_C
description: Cytochrome c oxidase subunit II-like C-terminal

phrase: PYLTIKATGHQWYWNYEYSDGVKISFDSYMIQTKDLQNGSPRLLEVDHRMVMPAGLQTRVVVTAEDVLHSWTIPSLGVKVDAVPGRLNQLPLATSRVGVFYGQCSEICGANHSFMPIAMEATPLHHFEQ
type: DOMAIN
name: CcO_II_C
description: Cytochrome c oxidase subunit 2, C-terminal

phrase: LTIKATGHQWYWNYEYSDGVKISFDSYMIQTKDLQNGSPRLLEVDHRMVMPAGLQTRVVVTAEDVLHSWTIPSLGVKVDAVPGRLNQLPLATSRVGVFYGQCSEICGANHSFMPIAME
type: DOMAIN
name: CcO_II-like_C
description: Cytochrome c oxidase subunit II-like C-terminal

phrase: VLHSWTIPSLGVKVDAVPGRLNQLPLATSRVGVFYGQCSEICGANHSF
type: BINDING_SITE
name: Copper_CuA
description: Copper centre Cu(A)

phrase: EEVIFLHDHVLLLTCLMTMVITMFTLTATTTALTHNDPTEEVEQLEAAWTVAPIMILILTALPSVRSLYLMEEVFNPYLTIKATGHQWYWNYEYSDGVKISFDSYMIQTKDLQNGSPRLLEVDHRMVMPAGLQTRVVVTAEDVLHSWTIPSLGVKVDAVPGRLNQLPLATSRVGVFYGQCSEICGANHSFMPIAMEATPLHHFEQW
type: DOMAIN
name: Cyt_c_oxidase_su2
description: Cytochrome c oxidase, subunit II
Protein sequence:
MSQDQPIVLDPTYASFDAAARPADLGATHFIGIGGAGMSVLAEMLHAEGVSVDGSDRSHSAKTDRLETLGITVEFGQRAENVAQAETVVYSSAIKPDNPEIVAAHAAGKRIVHRSDILALLMNGKRAVTVAGAHGKTTTSSMLSHILVNAGADPSYAIGGFIQGPDGTTLDGGHAGKGDILVAEADESDGSFAKYHPTIAIITNCEADHLDHYGDEAHYRAAFVAHAGRATGHVIISIDDPDGLAVLEAMPADVKSHTVAYGTTARESLPDLGGAAYVWIASESETAGSGVEQLTLHLPAAVTAGEPVSQSVALKVPGVHNARNAAAAISAAVLLGVSPADAAKAAGTFLGAARRFQVRGTVKQVTVVDDYAHHPTEIAALLDAARRRYPDSTIRVIFQPHLFSRTKFFAHQFAESLAKADDVIITGIFPAREKQADFPDISPSTIVDAAAGLKDASAGTWIQPVEDMCLAAKMMAMRAHHGDVIFTVGAGDITDMDQVLLTALEAHRESCE

Annotated regions:
phrase: HFIGIGGAGMSVLAEMLHAEGVSVDGSDRSHSAKTDRLETLGITVEFGQRAENVAQAETVVYSSAIKPDNPEIVAAHAAGKRIVHRSDILALLMNG
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: VAGAHGKTTTSSMLSHILVNAGADPSYAIGGFIQGPDGTTLDGGHAGKGDILVAEADESDGSFAKYHPTIAIITNCEADHLDHYGDEAHYRAAFVAHAGRATGHVIISIDDPDGLAVLEAMPADVKSHTVAYGTTARESLPDLGGAAYVWIASESETAGSGVEQLTLHLPAAVTAGEPVSQSVALKVPGVHNARNAAAAISA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: RRFQVRGTVKQVTVVDDYAHHPTEIAALLDAARRRYPDSTIRVIFQPHLFSRTKFFAHQFAESLAKADDVIITGIFPAREKQADFPDISPSTIVDAAAGLKDASAGTWIQPVEDMCLAAKMMAMRAHHGDVIFTVGA
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MVRWLYSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPEVYILIIPGFGMVSHIVSAFSGKPVFGYLGMVYAMFSIGILGFLVWSHHMYAVGLDVDTRAYFTAATMIIAVPTGIKIFSWLATLYGGSLRITTPMLFALGFIALFTIGGLTGVILANASLDVALHDLKYKTTTYRNSYYTTGPLYYKPSTLSRQQLDAFVVGLIDGDGSLQVNHWRYKILQFRLVVKLADKPINYEMLCIIASIYGGNVRRVQKEGGYVIWTVNDKKTFTRTILPLFSKCAPLTSRMHLQLQFFLVFFNDPNVDLYFKLRDSKYIDREKVSPLFNKAPSYFSDWLGGFIESEGSFVNRSSGGSSFSIAQNHDYYLIEAIRDFYGVSHLTISNKFGKVSGYPLYEVSIASLAGVTHVIYHCVPLLQGYKYHQLVEFINKSKSLKAVTKEFLNLL

Annotated regions:
phrase: WFFGHPEVYILIIPGFGMVSHIVSAFSGKPVFGYLGMVYAMFSIGILGFLVWSH
type: BINDING_SITE
name: Cyt_c_Oxase_su1_BS
description: Cytochrome c oxidase, subunit I, copper-binding site

phrase: TNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPEVYILIIPGFGMVSHIVSAFSGKPVFGYLGMVYAMFSIGILGFLVWSHHMYAVGLDVDTRAYFTAATMIIAVPTGIKIFSWLATLYGGSLRITTPMLFALGFIALFTIGGLTGVILANASLDVALHDLK
type: DOMAIN
name: Cyt_c_oxase_su1_dom
description: Cytochrome c oxidase subunit I domain

phrase: VGLIDGDGSLQVNHWRYKILQFRLVVKLADKPINYEMLCIIASIYGGNVRRVQKEGGYVIWTVNDKKTFTRTILPLFSKCAPLTSRMHLQL
type: DOMAIN
name: LAGLIDADG_dom
description: Homing endonuclease, LAGLIDADG domain

phrase: MVRWLYSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMVMPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMTLHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWFFGHPEVYILIIPGFGMVSHIVSAFSGKPVFGYLGMVYAMFSIGILGFLVWSHHMYAVGLDVDTRAYFTAATMIIAVPTGIKIFSWLATLYGGSLRITTPMLFALGFIALFTIGGLTGVILANASLDVALHDLK
type: DOMAIN
name: Cyt_c_oxase-like_su1_dom
description: Cytochrome c oxidase-like, subunit I domain
Protein sequence:
MKIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQFAFVHMRENAGAVRAIEALHGHELRPGRALVVEMSRPRPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQLNGKEVKGKRINVELSTKGQKKGPALAIQSGDKTKKPGAGDTAFPGTGGFSATFDYQQAFGNSTGGFDGQARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQPSVSLGAAYRAQPSASLGVGYRTQPMAAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGVQPSASALSTYGGQAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAASSLGSYGAQAASYGAQSAASSLAYGAQAASYSAQPSASYSAQSAPYAAQQAASYSSQPAAYVAQPATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASIGLSGSYGAQSAAAATGSYGAAAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAAASYRGQPGSAYDGTGQPSAAYLSMSQGAVANANSTPPPYERTRLSPPRASYDDPYKKAVAMSKRYGSDRRLAELSDYRRLSESQLSFRRSPTKSSLDYRRLPDAHSDYARYSGSYNDYLRAAQMHSGYQRRM

Annotated regions:
phrase: MKIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQFAFVHMRENAGAVRAIEALHGHELRPGRALVVEMSR
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: KIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQFAFVHMRENAGAVRAIEALHGHELRPGRALVV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: KIFVGNVSAACTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQLNGKEVKGKRINV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: MKIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQFAFVHMRENAGAVRAIEALHGHELRPGRALVVEM
type: DOMAIN
name: RBM14_RRM1
description: RBM14, RNA recognition motif 1

phrase: WKIFVGNVSAACTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQLNGKEVKGKRINVE
type: DOMAIN
name: RBM14_RRM2
description: RBM14, RNA recognition motif 2

phrase: IFVGNVSAACTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQLNGKEVKGKR
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: IFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQFAFVHMRENAGAVRAIEALHGHEL
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: WKIFVGNVSAACTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQLNGKEVKGKRINVELST
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain
Protein sequence:
MRNLNTELDFFVSFSALKEENISQLKVYWAQSNLVELYYGESFYINIVCSRPIVDENVTTWPENEGFRIEGTLLESLVESVTSASNYPKVNAFSLMCSGIPSFIWVEDDKQYALWACLAQLDSYSYPNHKLEIHVYKHILPDLPQSSEVDRNSETEGTREENSNTSDWDEQNEYVSEVEGDYNLLGSLSNDIQFRSNPPVISGAYVFGESDVANELKDPSRKTKTRKKVFECSVPVVLKLRSYALNESNQYITSIVSPDSSCENIRILGFKAETNAATISLFAPKTPEKLQITLSSSDVFTIIHLLQIPDNIKHIELQCFCKVIVAQKLSETLVESMPFTYKHPPVLITRRTPTKTHTKQLSSSGNVSAAQSISSLNLLEISASSPSYVPSGSSFSVRANLYNPLDFSIDLLIRIPLYCYDDCLTNKEHSTSKSEEKSSELLKYPNGHTISPGIIALSTKLYTGSIFPKCEKDFDLHFLAYKPGSYDLSSISIEDVNHVVHKPRKLSKELQIIVT

Annotated regions:
Protein sequence:
MAFRLKLCPEKTNIDFFWAAPVTFGFSVFLMAASLVAWLTLGLNFGIDFRGGTTIRTESTQAVDVAAYRAALEGQDLGDISITEVFDPGFRADQHVAMVRIGAQDATQSITPEQIGQVEEALKTVDPSITFPSVESVGPKVSGELIRSAILAVAAACAGIAVYIWLRFEWQFALGSVAALIHDVLVTIGVFALFQIKFDLTTVAALLTVLGYSINDTVVVFDRLRENLVKYKTMPLRDVMNLSVNETLSRTIMTLMTTLIALVSLLVFGGDVIRGFVFAITFGVVIGTYSSVYMAKNIVLYLGVDRGGPKKDSKAGTQFANIDA

Annotated regions:
phrase: TPEQIGQVEEALKTVDPSITFPSVESVGPKVSGELIRSAILAVAAACAGIAVYIWLRFEWQFALGSVAALIHDVLVTIGVFALFQIKFDLTTVAALLTVLGYSINDTVVVFDRLRENLVKYKTMPLRDVMNLSVNETLSRTIMTLMTTLIALVSLLVFGGDVIRGFVFAITFGVVIGTYSS
type: DOMAIN
name: SecD_SecF_C_bact
description: Protein-export membrane protein SecD/SecF, C-terminal, bacterial

phrase: VEEALKTVDPSITFPSVESVGPKVSGELIRSAILAVAAACAGIAVYIWLRFEWQFALGSVAALIHDVLVTIGVFALFQIKFDLTTVAALLTVLGYSINDTVVVFDRLRENLVKYKTMPLRDVMNLSVNETLSRTIMTLMTTLIALVSLLVFGGDVIRGFVFAITFGVVIGTYSSVYMAKNIVLYL
type: DOMAIN
name: SecD_SecF_C
description: Protein export membrane protein SecD/SecF, C-terminal

phrase: VAWLTLGLNFGIDFRGGTTIRTESTQA
type: CONSERVED_SITE
name: SecD/SecF_CS
description: Protein-export membrane protein SecD/SecF/SecDF, conserved site
Protein sequence:
MSAKEVRFSDDARSRMVRGVNVLANAVKVTLGPKGRNVVLEKSFGAPTVTKDGVSVAKEIELEDKFENMGAQMVKEVSSQTSDIAGDGTTTATVLAQAIVREGMKSVTAGMNPMDLKRGIDKAVIAAVEELKKLSKPCTDSKAIAQVGTISANSDESIGQIIADAMAKVGKEGVITVEEGSSLENELDVVEGMQFDRGYLSPYFVNNQQNMSAELDDCFVLLYDKKISNIRDLLPVLEGVAKAGKPLLIIAEDIEGEALATLVVNTIRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGQVISEEVGLSLEKASLDDLGQAKRIVVTKENSTIIDGAGKPDEIKGRVEQIRAQIEDATSDYDKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRALQALKSLKGANHDQDIGIAIARRAMEEPLRQIVSNCGEEPSVVLNNVVEGKGNYGYNAATGEYGDMIEMGILDPTKVTRSALQNAASVSGLIITTEAMVAELPKKGDSAPAGGGMGDMGGMGMM

Annotated regions:
phrase: AAVEEGVVPGG
type: CONSERVED_SITE
name: Chaperonin_Cpn60_CS
description: Chaperonin Cpn60, conserved site
Protein sequence:
MSKSHAAYIDYALRRTTNMPVEMMGSDVVRLKDYQHFVARVFLGLDSMHSLLLFHETGVGKTMTTVYILKHLKDIYTNWAIILLVKKALIEDPWMNTILRYAPEITKDCIFINYDDQNFRNKFFTNIKTINSKSRICVIIDECHNFISKSLIKEDGKIRPTRSVYNFLSKTIALKNHKMICLSATPIVNSVQEFTMLVNLLRPGSLQHQSLFENKRLVDEKELVSKLGGLCSYIVNNEFSIFDDVEGSASFAKKTVLMRYVNMSKKQEEIYQKAKLAEIKTGISSFRILRRMATTFTFDSFPERQNRDPGEYAQEIATLYNDFKNSLRDREFSKSALDTFKRGELLGGDASAADISLFTELKEKSVKFIDVCLGILASHGKCLVFEPFVNQSGIEILLLYFKVFGISNIEFSSRTKDTRIKAVAEFNQESNTNGECIKTCVFSSSGGEGISFFSINDIFILDMTWNEASLRQIVGRAIRLNSHVLTPPERRYVNVHFIMARLSNGMPTVDEDLFEIIQSKSKEFVQLFRVFKHTSLEWIHANEKDFSPIDNESGWKTLVSRAIDLSSNKNITNKLIEGTNIWYSNSNRLMSINRGFKGVDGRVYDVDGNYLHDMPDNPVIKIHDGKLIYIF

Annotated regions:
phrase: DVVRLKDYQHFVARVFLGLDSMHSLLLFHETGVGKTMTTVYILKHLKDIYTNWAIILLVKKALIEDPWMNTILRYAPEITKDCIFINYDDQNFRNKFFTNIKTINSKSRICVIIDECHNFISKSLIKEDGKIRPTRSVYNFLSKTIALKNHKMICLSATPIVNSVQEFTMLVNLLRPGSLQHQSLFENKRL
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: YQHFVARVFLGLDSMHSLLLFHETGVGKTMTTVYILKHLKDIYTNWAIILLVKKALIEDPWMNTILRYAPEITKDCIFINYDDQNFRNKFFTNIKTINSKSRICVIIDECHNFISKSLIKEDGKIRPTRSVYNFLSKTIALKNHKMICLSATPIVNSVQEFTMLVNLLRPGSLQHQSLFENKRLVDEKELVSKLGGLCSYIVNNEFSIFDDVEGSASFAKKTVLMRYVNMSKKQEEIYQKAKLAEIKTGISSFRILRRMATTFTFDSFPERQNRDP
type: DOMAIN
name: SNF2_N
description: SNF2, N-terminal

phrase: FLGLDSMHSLLLFHETGVGKTMTTVYILKHLKDIYTNWAIILLVKKALIEDPWMNTILRYAPEITKDCIFINYDDQNFRNKFFTNIKTINSKSRICVIIDECHNFISKSLIKEDGKIRPTRSVYNFLSKTIALKNHKMICLSATPIVNSVQEFTMLVNLLRP
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: HVLTPPERRYVNVHFIMARLSNGMPTVDEDLFEIIQSKSKEFVQLFRVFKHTSLEWIHANEKDFSPIDNESGWKTLVSRAIDLSSNKNITNKLIEGTNIWYSNSNRLMSINRGFKGVDGRVYDVDGNYLHDMPDNPVIKIHDGKLIY
type: DOMAIN
name: NPHI_C
description: Nucleoside triphosphatase I, C-terminal

phrase: EILLLYFKVFGISNIEFSSRTKDTRIKAVAEFNQESNTNGECIKTCVFSSSGGEGISFFSINDIFILDMTWNEASLRQIVGRAIRL
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: LASHGKCLVFEPFVNQSGIEILLLYFKVFGISNIEFSSRTKDTRIKAVAEFNQESNTNGECIKTCVFSSSGGEGISFFSINDIFILDMTWNEASLRQIVGRAIR
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like