nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSIFDPIEEAIYALAQGDVVIVCDDEDRENEGDFVALAEKASPEVINFMIKHGRGLVCAPITKERARKLNLDPMVDRNSDPHGTAFTISIDHKHTTTGISASERSLTIKALIDETTKPMDFQRPGHIFPLVAKDGGVLRRAGHTEAAVDLARMSGAKPAGVICEIIKEDGEMARVPDLKKVKDEFGLKMVTIKDLIKYRNRKDQLIKREVEIDLPTELGEFRAVGYSNIVDGKEHVALVKGDIGGEKPTLVRVHSECLTGDVFGSKRCDCGPQLEAALSQIEQAGSGILLYMRQEGRGIGLLNKMRAYKLQEEGYDTVEANEKLGFAPDLRDYGIGAQILKDLGVKKMRLLTNNPRKVKGLDGYDLEIVERVQLQLAHSAENEKYLKTKRDKLGHMLHL

Annotated regions:
phrase: REVEIDLPTELGEFRAVGYSNIVDGKEHVALVKGDIGGEKPTLVRVHSECLTGDVFGSKRCDCGPQLEAALSQIEQAGSGILLYMRQEGRGIGLLNKMRAYKLQEEGYDTVEANEKLGFAPDLRDYGIGAQILKDLGVKKMRLLTNNPRKVKGLDGYDLEIVERV
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MRHVFLIGLSGSGKSTVGRLLAQRLGLPVYDIDALIEEKYGERIPLIFSRHGEDYFRALESSILLEVAQESTGAVIITGGGIVTRAENRALMAERGIRIFTHVDPVVALQRLQAQHAREQASGQTLEIRPLLAGPNPLAALQQQLAMRLSWYQEAELTCSTSDKSVEEVVQEITTMVTGAQDRPAPIVRRVQIGDGYDVIVEWGGLERLGSYLSHLQLPPRVFVITDSNIGPFYAEKVTQNLLAAGFEPQVLTIPAGEASKSQTQLNKIYDWLLEQRAERREALIALGGGVIGDMVGFAAASYLRGVPLIQIPTSLLAQVDSAIGGKTGINHPKGKNLIGAFYHPRLVLADPSTLLTLPERSRTEGWAEIVKYGIILDTELFALLEAHAETLRDFSHPPVALLCQIIARSIDLKVAMIEEDEREQGRRAILNYGHTVGHALENASGYGEWLHGEAVSLGMVAAATMAQEAGMLAASDVQRQNHLLAALGLPISYTGSVQAQEILSTMLLDKKVVGKRIRWIMPTRIGEVVITPMPDDLVTRVIKAFFAGEVQ

Annotated regions:
phrase: GWAEIVKYGIILDTELFALLEAHAETLRDFSHPPVALLCQIIARSIDLKVAMIEEDEREQGRRAILNYGHTVGHALENASGYGEWLHGEAVSLGMVAAATMAQEAGMLAASDVQRQNHLLAALGLPISYTGSVQAQEILSTMLLDKK
type: DOMAIN
name: DHQS_C
description: 3-dehydroquinate synthase, C-terminal domain

phrase: LTIPAGEASKSQTQLNKIYDWLLEQRAERREALIALGGGVIGDMVGFAAASYLRGVPLIQIPTSLLAQVDSAIGGKTGINHPKGKNLIGAFYHPRLVLADPSTLLTLPER
type: DOMAIN
name: DHQS/DOIS_N
description: 3-dehydroquinate synthase, N-terminal domain
Protein sequence:
MQKYLEKANVLIEALPYIRKFNSKIILIKYGGSAMENEELKHCVMQDIALLKLVGLKPIIVHGGGKDISAMCEKLGVKSEFKNGLRVSDKATTEVASMVLNHINKNLVHSLQNLGVKAIGLCGKDGALLECVKKDENLAFVGTIQKVNSKILEELLEKDFLPIITPIGMDENFNTYNINADDAACSIAKALRAEKLAFLTDTAGLYEDFNDKNSLISKISLEQAKILAPKIEGGMHVKLKSCIDACENGVKKVHILDGRVKHSLLLEFFTDEGIGTLVG

Annotated regions:
phrase: KIILIKYGGSAMENEELKHCVMQDIALLKLVGLKPIIVHGGGKDISAMCEKLGVKSEFKNGLRVSDKATTEVASMVLNHINKNLVHSLQNLGVKAIGLCGKDGALLECVKKDENLAFVGTIQKVNSKILEELLEKDFLPIITPIGMDENFNTYNINADDAACSIAKALRAEKLAFLTDTAGLYEDFNDKNSLISKISLEQAKILAPKIEGGMHVKLKSCIDACENGVKKVHIL
type: DOMAIN
name: Asp/Glu/Uridylate_kinase
description: Aspartate/glutamate/uridylate kinase
Protein sequence:
MNTVKPESIALFCLTPGGVALAKRLAAMLPLTCFTSEKLREEGFIPFDGGFANTARQAFTTYTALIFIGATGIAVRVLAPLVNDKFSDPAVVVIDERGQHVISLLSGHAGGANALTRYLAGMLGADPVITTATDVNEMSALDTLAFQLNARMSDLRTAVKTVNQMLVSHQRVGLWWDAELTEEIGQCDIRGFIPVDDLQRLPELDALICVSLRNDLPELPVPHWKLVPQRVVAGIGCRRDTPFPLLATLLARQLEAQKLDPLALKAIGSVTLKKGEPGLIQLASCCRVPFKTFTAEALREFEHHFPGSGFVRKTVGVGSVSGPAAWLLSQGQLLGETLREQGVTITLGVAH

Annotated regions:
phrase: VVAGIGCRRDTPFPLLATLLARQLEAQKLDPLALKAIGSVTLKKGEPGLIQLASCCRVPFKTFTAEALREFEHHFPGSGFVRKTVGVGSVSGPAAWLLSQGQLLGETLREQGVTIT
type: DOMAIN
name: CobE/GbiG_C
description: CobE/GbiG C-terminal domain

phrase: TARQAFTTYTALIFIGATGIAVRVLAPLVNDKFSDPAVVVIDERGQHVISLLSGHAGGANALTRYLAGMLGADPVITTAT
type: DOMAIN
name: CbiG_N
description: Cobalamin synthesis G, N-terminal

phrase: ALDTLAFQLNARMSDLRTAVKTVNQMLVSHQRVGLWWDAELTEEIGQCDIRGFIPVDDLQRLPELDALICVSLRNDL
type: DOMAIN
name: CbiG_mid
description: Cobalamin biosynthesis central region
Protein sequence:
MADPASNVLRLHDTHLRDKRPFTPLDPENVRVYFCGPTVYDRAHLGNLRAMMCADILIRLLRTMYPRVTYVRNVTDVDDKINARAKENGEDISALTERTTQAFHEDLASLFILPPDIEPRATHHIDDMLEMIGRLVENGHAYVAEGHVLFAVRNFPSYGELSGRSLDDMIAGARVEVAPYKRDPGDFVLWKPSEPDLPGWDSPYGRGRPGWHIECSAMSHRYLGESFDIHGGGDDLLFPHHENERAQSMCCYPHGKFATHWVHNGMLLSNGEKMSKSLGNFFTIREVLDRSPAEPLRLLYLGAHYRSTLDFSWEKLEEARRVLDRLYRALERGNAQPGTALPAAVMDALCDDLNTPLAIAALHPLADAAMQGDQDAASSLLAAGKLLGLFNVTPAEWFQSGVDASAIEKLIEERLAARKSRDFARADAIRAQLAADGITLEDGPGGTTWRKA

Annotated regions:
phrase: RLHDTHLRDKRPFTPLDPENVRVYFCGPTVYDRAHLGNLRAMMCADILIRLLRTMYPRVTYVRNVTDVDDKINARAKENGEDISALTERTTQAFHEDLASLFILPPDIEPRATHHIDDMLEMIGRLVENGHAYVAEGHVLFAVRNFPSYGELSGRSLDDMIAGARVEVAPYKRDPGDFVLWKPSEPDLPGWDSPYGRGRPGWHIECSAMSHRYLGESFDIHGGGDDLLFPHHENERAQSMCCYPHGKFATHWVHNGMLLSNGEKMSKSLGNFFTIREVLDRSPAEPLRLLYLGAHYRSTLDF
type: DOMAIN
name: tRNA-synt_1_cat_dom
description: tRNA synthetases class I, catalytic domain

phrase: AVMDALCDDLNTPLAIAALHPLADAAMQGDQDAASSLLAAGKLLGLFNVTPAEW
type: DOMAIN
name: Cys-tRNA-synt_Ia_DALR
description: Cysteinyl-tRNA synthetase, class Ia, DALR

phrase: AIEKLIEERLAARKSRDFARADAIRAQLAADGITLEDGPGGTTW
type: DOMAIN
name: CysS_C
description: Cysteinyl-tRNA ligase, anticodon binding domain

phrase: VMDALCDDLNTPLAIAALHPLADAAMQGD
type: DOMAIN
name: Cys-tRNA-synt_Ia_DALR
description: Cysteinyl-tRNA synthetase, class Ia, DALR

phrase: FTPLDPENVRVYFCGPTVYDRAHLGNLRAMMCADILIRLLRTMYPRVTYVRNVTDVDDKINARAKENGEDISALTERTTQAFHEDLASLFILPPDIEPRATHHIDDMLEMIGRLVENGHAYVAEGHVLFAVRNFPSYGELSGRSLDDMIAGARVEVAPYKRDPGDFVLWKPSEPDLPGWDSPYGRGRPGWHIECSAMSHRYLGESFDIHGGGDDLLFPHHENERAQSMCCYPHGKFATHWVHNGMLLSNGEKMSKSLGNFFTIREVLDRSPAEPLRLLYLGAHYRSTLDFSWEKLEEA
type: DOMAIN
name: tRNA-synt_1_cat_dom
description: tRNA synthetases class I, catalytic domain
Protein sequence:
MEGSWRDVLAVLVILAQLTVSGSSYQIIEGPRNVTALKGSEARFNCTVTHGWKLIMWALNGIVELSLTSQKPIITSNRFTSASYNSTDSFISEMIIHNVQLNDSGPVQCSLQNSNVFGFAFLSVQVMGTLNIPSSNLIVTEGEPCNVTCYAVGWTPLPNISWELEVPVSHSSYYSFLEPGNSLRVLSVLDLTPLGNGTLTCVAEMKDLQASESLTVNLTVVQPPPDSIGGEGQALPTWAIILLAVAFSLLLILIIALIIIFCCCCVSRREKEESTYQNEIRKSANVRTGKADPETWLKSGKENYGYKSDEARAAQIASLPPKSGEVSLPEQRSSLPQQELDKHRPSPVTHPRVSFDIASPQKIRNVTIV

Annotated regions:
phrase: YQIIEGPRNVTALKGSEARFNCTVTHGWKLIMWALNGIVELSLTSQKPIITSNRFTSASYNSTDSFISEMIIHNVQLNDSGPVQCSLQNSNVFGFAFLSV
type: DOMAIN
name: Ig-like_dom
description: Immunoglobulin-like domain

phrase: SSNLIVTEGEPCNVTCYAVGWTPLPNISWELEVPVSHSSYYSFLEPGNSLRVLSVLDLTPLGNGTLTCVAEMKDLQASESLTVNLTV
type: DOMAIN
name: Ig_sub
description: Immunoglobulin domain subtype

phrase: PRNVTALKGSEARFNCTVTHGWKLIMWALNGIVELSLTSQKPIITSNRFTSASYNSTDSFISEMIIHNVQLNDSGPVQCSLQNSNVFGFAFLSV
type: DOMAIN
name: Ig_sub
description: Immunoglobulin domain subtype

phrase: GTLNIPSSNLIVTEGEPCNVTCYAVGWTPLPNISWELEVPVSHSSYYSFLEPGNSLRVLSVLDLTPLGNGTLTCVAEMKDLQASESLTV
type: DOMAIN
name: Ig-like_dom
description: Immunoglobulin-like domain
Protein sequence:
MTQLQKKDRYNVAIAGVTGAVGEVFLQILEERQFPIHQLKLLASPRSAGKKITYAGKEYTVEALTQDSFADVDIALFSAGGGTSKEFAPIAAQAGAVVIDNSSAFRMDEDVPLVVPEVNPADAFRHKGIIANPNCTTIIMVVALKPLHDYSPIKRVVVSSYQSASGAGAKGMYELQNQTKQFCAGQPLEIQAFAHQLLQNVIPHIDTPQDNGYTREEMKMFHETRKIMGDQNIRVSATCVRVPVISAHSEAVTIETEQPISVEKARELLSAAPGIKVVDDLPNKVYPMPLFVAGRDDCEVGRIRKDLAFENGLTFWVVGDQLRKGAALNAIQIAELLIQK

Annotated regions:
phrase: LKPLHDYSPIKRVVVSSYQSASGAGAKGMYELQNQTKQFCAGQPLEIQAFAHQLLQNVIPHIDTPQDNGYTREEMKMFHETRKIMGDQNIRVSATCVRVPVISAHSEAVTIETEQPISVEKARELLSAAPGIKVVDDLPNKVYPMPLFVAGRDDCEVGRIRKDLAFENGLTFWVVGDQLR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: NVAIAGVTGAVGEVFLQILEERQFPIHQLKLLASPRSAGKKITYAGKEYTVEALTQDSFADVDIALFSAGGGTSKEFAPIAAQAGAVVIDNSSAFRMDEDVPLVVPEVNPA
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: NVAIAGVTGAVGEVFLQILEERQFPIHQLKLLASPRSAGKKITYAGKEYTVEALTQDSFADVDIALFSAGGGTSKEFAPIAAQAGAVVIDNSSAFRMDEDVPLVVPEVNPADAFR
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MSQELNSMFSPHSRLRHAVADTFAMVVYCSVVGMMIEIFVSGMSFEQSLSSRLVAIPVNMVIAWPYGLYRDAVMRLAARVGKGRLVRNLADVIAYITFQSPVYAAILLFVGADIPQIITAVSSNIVVSMMMGAAYGYFLDYCRRLFRVSPAAPVSAQA

Annotated regions:
Protein sequence:
MSTQTVTIKSLGAQGDGIAHCPDGPVYVPFALPGETVAIAKVKDQGTVMSITEASADRRDPVCRHFGPEGINGTCGGCSLQHLADQPYHAFKRELVVSALRSKGLTPPVDDLVICRPGERRRAVFAARKTEKGLLLGFSQANSHHIVAIEECPVTSPGIVSRFDAIRAIGLSMVANAEPFRITVLETLSGLDISVEGIKSVNDKQRRTLTETVLAMRGIARVSLSGEILIEPQKPIIEFGGIPVSPPAGGFTQATKQAEDAMAELMLAHVGKSKRIADLFCGSGTFALRLARIGRVHAVEAEDKALKALDFAARNTQGLKPVSVEKRDLFRRPLMTSELKNYDAVVFDPPRAGAEVQCKELARSTVKKIVAVSCNPLTLARDLAILTEGGYRVTRVTPVDQFLWSPHVEAVAVLEK

Annotated regions:
phrase: STQTVTIKSLGAQGDGIAHCPDGPVYVPFALPGETVA
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: DPPRAGAEVQCKELARSTVKKIVAVSCNPL
type: ACTIVE_SITE
name: MeTrfase_TrmA_AS
description: RNA methyltransferase TrmA, active site
Protein sequence:
MFDRIEEAIYELMQGKVVIVCDDEDRENEGDFIALADKATPEVINFMIKHGRGLVCAPITQETATKLELAPMVGQNTDPHGTAFTVSVDYKTSSTGISAHERSETIKRLIDPSTTAGDFKRPGHIFPLIAKDGGVLRRAGHTEAAVDLARLCGSEPAGVICEIMNEDGSMARVPDLRKIADEFEIKMITIKDLISYRRKKEKLVNREIEIQLPSEFGDFKAVGYTNSLDSYEHVALVKGEILEDEPVLVRVHSECLTGDVFGSFRCDCGPQLHAALSQIEAAGNGVLLYMRQEGRGIGLINKMRAYKLQEKGYDTVEANEQLGFAPDLRDYGIGAQILKDLGIKKMKLLTNNPRKIAGLEGYGLEIVDRVPIQLPTKKENESYLKTKHEKLGHMLHF

Annotated regions:
phrase: REIEIQLPSEFGDFKAVGYTNSLDSYEHVALVKGEILEDEPVLVRVHSECLTGDVFGSFRCDCGPQLHAALSQIEAAGNGVLLYMRQEGRGIGLINKMRAYKLQEKGYDTVEANEQLGFAPDLRDYGIGAQILKDLGIKKMKLLTNNPRKIAGLEGYGLEIVDRV
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MSITKPETTVLKNYIGGQWVASSGTETLEVPNPATGEVLARVPISTKEDVDQAVQAAKKAFATWKDVPVPKRARIMFSFHHLLNQHHEELAELVVQENGKAYKEAYGEIQRGIECVEFAAGAPTLLMGESLSNIAEEIDSEMFRYPLGVVAGITPFNFPMMVPLWMFPLAIVCGNTFVLKPSERTPILANKLAELFTEAGAPPGVLNVVHGAHEVVNALIDHEDIRAISFVGSQPVAKYVYERTAAQGKRVQALSGAKNHHIVMPDADVETAVQHVISSAFGSAGQRCMACSAVVIVGENETFVRRLKQKADELIIGNGMDPEVLLTPVIRQSHREKVLGYIQKGIEEGAVLLRDGRKEMDDRPEGNFLGPTIFDYVTPDMTIAKEEIFAPVLSLLRANDLDEALSYIRKSRYGNGATIYTKDAKAVRKFREEADAGMLGINVGVPATMAFFPFSGWKDSFYGDLHVNGKDGVNFYTRKKMITSRFDF

Annotated regions:
phrase: WVASSGTETLEVPNPATGEVLARVPISTKEDVDQAVQAAKKAFATWKDVPVPKRARIMFSFHHLLNQHHEELAELVVQENGKAYKEAYGEIQRGIECVEFAAGAPTLLMGESLSNIAEEIDSEMFRYPLGVVAGITPFNFPMMVPLWMFPLAIVCGNTFVLKPSERTPILANKLAELFTEAGAPPGVLNVVHGAHEVVNALIDHEDIRAISFVGSQPVAKYVYERTAAQGKRVQALSGAKNHHIVMPDADVETAVQHVISSAFGSAGQRCMACSAVVIVGENETFVRRLKQKADELIIGNGMDPEVLLTPVIRQSHREKVLGYIQKGIEEGAVLLRDGRKEMDDRPEGNFLGPTIFDYVTPDMTIAKEEIFAPVLSLLRANDLDEALSYIRKSRYGNGATIYTKDAKAVRKFREEADAGMLGINVGVPATMAFFPFSGWKDSFYGDLHVNGKDGVNFYTRKKM
type: DOMAIN
name: Aldehyde_DH_dom
description: Aldehyde dehydrogenase domain

phrase: FGSAGQRCMAC
type: CONSERVED_SITE
name: Ald_DH_CS_CYS
description: Aldehyde dehydrogenase, cysteine active site
Protein sequence:
MSENIAVILAAGKGVRMKSEVPKVLHKVAGLPMVMHVVRAVREAGIHRIIMVVGHGREQLVTSLPSEGIEFVVQEQQLGTGHALMQADGLAAPDDTVMVLCGDTPLLRGSTLQKLLEYHHQTGAMGTVLTTRLPEPTGYGRIVRDENGRFDRIVEEKDAAPEIKAIDEINSGMYCFQAGPVFDALKRIRPENVQGEYYLPDALPILCSQGFIVAALLHEDEEDIYGINDRIQLAHAEQVLRRRKNHQLMAEGVTMMDPGSTFIDFEVFIGSDTRILPFTIIEGSTVIGENCTIGPGSHIVDSIIGNNVVLESSKLLESKVDDACTIGPFAYLRPGTELQTGVKVGDFVEIKKSVIGEGSKVPHLSYVGDARVGRHVNIGAGTITCNYDGKNKYETVIDDHAFIGSNTNLIAPVKIGKRAVTGAGSTITRQVPDEALGVERARQKNIDGWASKGQEREAESKLRR

Annotated regions:
phrase: TVIDDHAFIGSNTNLIAPVKIGKRAVTGAGSTIT
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: VFIGSDTRILPFTIIEGSTVIGENCTIGPGSH
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: AVILAAGKGVRMKSEVPKVLHKVAGLPMVMHVVRAVREAGIHRIIMVVGHGREQLVTSLPSEGIEFVVQEQQLGTGHALMQADGLAAPDDTVMVLCGDTPLLRGSTLQKLLEYHHQTGAMGTVLTTRLPEPTGYGR
type: DOMAIN
name: MobA-like_NTP_Trfase
description: MobA-like NTP transferase

phrase: GVTMMDPGSTFIDFEVFIGSDTRILPFTIIEGSTVIGENCTIGPGSHIVDSIIGNNVVLESSKLLESKVDDACTIGPFAYLRPGTELQTGVKVGDFVEIKKSVIGEGSKVPHLSYVGDARVGRHVNIGAGTITCNYDGKNKYETVIDDHAFIGSNTNLIAPVKIGKRAVTGAGSTITRQVPDEALGVERAR
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain
Protein sequence:
MRVRGIQRNCQHLLTWGTIILGMIIICNTAENLWVTVYYGVPVWKDAKTTLFCASDAKAYKTEVHNVWATHACVPTDPNPQEIDLENVTEMFNMWKNSMVEQMHTDIISLWDQSLKPCVKLTPLCVTLHCANVNSSHDSSTVTNGNSTVPNVNSTVTEQEMKNCSFNTTTEIRDRKQKAYSLFYKLDIVPISNNNREYILMNCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGLCKNVSTVQCTHGIKPVVSTQLLLNGSLAEEEIMIRSENISDNAKTIIVQLITPVPINCTRPNNNKRKSIHIGPGQAFYATEDIIGNIRQAYCTVSKSLWNTTLKQVADKLKEHWNKTIIFTEPSGGDLEITTHSFNCGGEFFYCNTTGLFNSTWNTADLFNNTEPNNETITLPCKIKQIINVWQRVGQAIYAPPIEGLIKYNSNITGLLLTRDGGSHNSSNRTETFRPGGGNMKDNWRSELYKYKVVKIEPLGVAPTKAKRRVVERGKRAIGIGAVLIGFLGAAGSTMGAASVTLTVQARQLLSGIVQQQSNLLRAIEAQQHMLKLTVWGIKQLQARVLAVESYLRDQQLLGIWGCSGKLICTTTVPWNSSWSNKSYNEIWNNMTWLQWDREIDNYTEVIYRLIEESQNQQEKNEQDLLALDKWAGLWNWFNISNWLWYIRIFIIIVGGLIGLRIVFAVLSIINRVRQGYSPLSFQTHTPNLRDPDRPGRIEEEGGGQDRDRSTRLANGFLAIVWDDLRSLCL

Annotated regions:
phrase: VQARQLLSGIVQQQSNLLRAIEAQQHMLKLTVWGIKQLQARVLAVESYLRDQQLLGIWGCSGKLICTTTVPWNSSWSNKSYNEIWNNMTWLQWDREIDNYTEVIYRLIEESQNQQEKNEQDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKDAKTTLFCASDAKAYKTEVHNVWATHACVPTDPNPQEIDLENVTEMFNMWKNSMVEQMHTDIISLWDQSLKPCVKLTPLCVTLHCANVNSSHDSSTVTNGNSTVPNVNSTVTEQEMKNCSFNTTTEIRDRKQKAYSLFYKLDIVPISNNNREYILMNCNTSAITQACPKVSFEPIPIHYCAPAGFAILKCKDKKFNGTGLCKNVSTVQCTHGIKPVVSTQLLLNGSLAEEEIMIRSENISDNAKTIIVQLITPVPINCTRPNNNKRKSIHIGPGQAFYATEDIIGNIRQAYCTVSKSLWNTTLKQVADKLKEHWNKTIIFTEPSGGDLEITTHSFNCGGEFFYCNTTGLFNSTWNTADLFNNTEPNNETITLPCKIKQIINVWQRVGQAIYAPPIEGLIKYNSNITGLLLTRDGGSHNSSNRTETFRPGGGNMKDNWRSELYKYKVVKIEPLGVAPTKAKRRVVERGK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: MGAASVTLTVQARQLLSGIVQQQSNLLRAIEAQQHMLKLTVWGIKQLQARVLAVESYLRDQQLLGIWGCSGKLICTTTVPWNSSWSNKSYNEIWNNMTWLQWDREIDNYTEVIYRLIEESQNQQEKNEQDLLALDKWAGLWNWFNISNWLWYIRIFIIIVGGLIGLRIVFAVLSIINRVRQGYSPLSFQTHT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
EEGWVPGPSLISLQMRVTPKLMRLAWDGFPLHYSEKHGWGYLVPGRQDNLPAASAEPEGPVCPHRAIERLYRQHCLQRGQEQPPEEAGVEDELMVLEGSSMWQKVEELSQLELDMERPGRAEQSQMQDEDGLPELVEESSQPSFHHGNGPYNDVNIPGCWFFKLPHKDGNENNVGSPFAKDFLPRMEDGTLRAAVGRTHGTRALEINKMVSFWRNAHKRVSSQVVVWLKKGELPRAVTRHPAYSEEEDYGAILPQVVTAGTITRRAVEPTWLTASNARADRVGSELKAMVQVPPGYSLVGADVDSQELWIAAVLGEAHFAGMHGCTAFGWMTLQGKKSDGTDLHSKTAATVGISREHAKVFNYGRIYGAGQPFAERLLMQFNHRLTQQQAREKAQQMYAVTKGIRRFHLSEEGEWLVKELELAVDKAEDGTVSAQDVQKIQREAMRKSRRKKKWDVVAHRMWAGGTESEMFNKLESIALSASPQTPVLGCHISRALEPAVAKGEFLTSRVNWVVQSSAVDYLHLMLVSMKWLFEEYDINGRFCISIHDEVRYLVQEQDRYRAALALQITNLLTRCMFAYKLGLQDLPQSVAFFSAVDIDRCLRKEVTMNCATPSNPTGMEKKYGIPRGEALDIYQIIEITKGSLEKK

Annotated regions:
phrase: REHAKVFNYGRIYGAGQPF
type: CONSERVED_SITE
name: DNA-dir_DNA_pol_A_CS
description: DNA-directed DNA polymerase, family A, conserved site

phrase: GSELKAMVQVPPGYSLVGADVDSQELWIAAVLGEAHFAGMHGCTAFGWMTLQGKKSDGTDLHSKTAATVGISREHAKVFNYGRIYGAGQPFAERLLMQFNHRLTQQQAREKAQQMYAVTKGIRRFHLSEEGEWLVKELELAVDKAEDGTVSAQDVQKIQREAMRKSRRKKKWDVVAHRMWAGGTESEMFNKLESIALSASPQTPVLGCHISRALEPAVAKGEFLTSRVNWVVQSSAVDYLHLMLVSMKWLFEEYDINGRFCISIHDEVRYLVQEQ
type: DOMAIN
name: DNA-dir_DNA_pol_A_palm_dom
description: DNA-directed DNA polymerase, family A, palm domain

phrase: HGTRALEINKMVSFWRNAHKRVSSQVVVWLKKGELPRAVTRHPAYSEEEDYGAILPQVVTAGTITRRAVEPTWLTASNARADRVGSELKAMVQVPPGYSLVGADVDSQELWIAAVLGEAHFAGMHGCTAFGWMTLQGKKSDGTDLHSKTAATVGISREHAKVFNYGRIYGAGQPFAERLLMQFNHRLTQQQAREKAQQMYAVTKGIRRFHLSEEGEWLVKELELAVDKAEDGTVSAQDVQKIQREAMRKSRRKKKWDVVAHRMWAGGTESEMFNKLESIALSASPQTPVLGCHISRALEPAVAKGEFLTSRVNWVVQSSAVDYLHLMLVSMKWLFEEYDINGRFCISIHDEVRYLVQEQDRYRAALALQITNLLTRCMFAYKLGLQDLPQSVAFFSAVDIDRCLRKEVTMNCATPSN
type: DOMAIN
name: POLG_palm_dom
description: DNA polymerase gamma, palm domain
Protein sequence:
MRKKIVVGNWKMNKNVAEGVALASSILENLDGGKMACEVGIAPAYPVLSEVGRVIEGSDICLVAQNCHYEDEGAYTGEVSVRMLDSLGCSYIIVGHSERRQYFGETNRTVNLRLKKALEGGMRVILCIGETLEEREAGVTDAIVTAQVREGLADIEDLGNVVLAYEPVWAIGTGKTATPEQADAVHASIRATISDMYGEADAEDIRIQYGGSVKPSNAVELFGMPNIDGGLIGGASLKADDFVAIVNAAG

Annotated regions:
phrase: AYEPVWAIGT
type: ACTIVE_SITE
name: Triosephosphate_isomerase_AS
description: Triosephosphate isomerase, active site
Protein sequence:
MSQAGAFPPGKKITVVFVIGGPGSGKGTQCSKIVRHFGFTHLSAGDLLRQQVQSDTEHGAMIKNLMHEGKLVPSDIIVRLLLTAMLQSGNDRFLVDGFPRNEENRRAYESIIGIEPELVLFIDCPREELERRILHRDQGRDDDNVDTIRKRFQVFHDSTLPVVLYYDRMGKVRRVDGAKSADAVFEDVKAIFTQLLTTQVHSLTHIYLPFSPIDCSVLIKP

Annotated regions:
phrase: FLVDGFPRNEE
type: CONSERVED_SITE
name: Adenylat_kinase_CS
description: Adenylate kinase, conserved site
Protein sequence:
MAKTSTSSRYGKYLYNNAQIMESNDVITQRREIISSIFKRVQTNNQTPAYVLGATGYGKVQNSKALCAMRMGARYNWEDDVYECTTCSGCFQTKVDFKEHDCDEENEDISMHPGTFTLKTEEFPVFQRETIRKTKSGTEFIYFGSFETPVPLLSTPTTNELVNIDACHQGRVDGLDGKLERCATSTLNSNEIPHVTQHITPDPSLVRLQSRQRTMNASDRKDGNNVSELIHRLTQIVHDRQLDVHFVGKRRLDGRCVQIDGKSYLQVQTKHTRGYKRKVDCHIPRGLEHIIHMLAKGNGYKSRTRIGNIRKGWSGCILQPENIIGRVGKRMHDFFVVRGVSNGELIDACVSVDLKDSNLEYFSAGQIIWKNFEEEFIKQRPSLRHRCTSDIDVAKCGILAATLVQLFHPCGKITCSQCVEDAMSRSSVEDTTDLLARLTVARKKIEDLNAFPQVLSLLTLLEEKFEEPPPNNEIYAQILQSIGHIKTQPFDKLNDMNSLFISHCGSMPKSVVQKLQEDLLEVVRYTKKRADSINRGEIQHYRNKIASKAHFNLDLMCDNQLDKNGNFIWGERGYHAKRFFSNYFDVIDPTANYSNHIVRRNPNGSRKLATGRLIVPTNFEAYRENLKGDRVHIHQITEECISRDGGNFVYSCPCVTHEDGRALESRVILPTKNHLVIGNSGDPKYIDLPIDTELTLYIRKEGYCYINIFMAMLVNVRESQAKTFTKMVRDVLVEKLGKWPTMMDVATACSFLTVFYPDTITAELPRIL

Annotated regions:
phrase: RKDGNNVSELIHRLTQIVHDRQLDVHFVGKRRLDGRCVQIDGKSYLQVQTKHTRGYKRKVDCHIPRGLEHIIHMLAKGNGYKSRTRIGNIRKGWSGCILQPENIIGRVGKRMHDFFVVRGVSNGELIDACVSVDLKDSNLEY
type: DOMAIN
name: Pept_S30_P1_potyvir
description: Peptidase S30, polyprotein P1, potyvirus

phrase: LYIRKEGYCYINIFMAMLVNVRESQAKTFTKMVRDVLVEKLGKWPTMMDVATACSFLTVFYPDTITAELPRI
type: DOMAIN
name: HC_PRO_CPD_dom
description: Helper-component proteinase (HC-Pro) cysteine protease (CPD) domain

phrase: NASDRKDGNNVSELIHRLTQIVHDRQLDVHFVGKRRLDGRCVQIDGKSYLQVQTKHTRGYKRKVDCHIPRGLEHIIHMLAKGNGYKSRTRIGNIRKGWSGCILQPENIIGRVGKRMHDFFVVRGVSNGELID
type: DOMAIN
name: Pept_S30_P1_potyvir
description: Peptidase S30, polyprotein P1, potyvirus
Protein sequence:
MISEDLKLSLYAEGCDIKQNEFLKYYTSFRIGGPVPYILFPKTLNAFVNALSQLVKRDIPFRIIGQGTNLIISDEPLKFVVLSTKYLNKMNFEEKNNMDLIVEAQSGVSLSALSFLLSEDGYSGLEFACGIPGSVGGGVYMNAGAYGGEMKDVVLETTVYDLRDGKVKTLNKGDLEFGYRTSILQEGSFILLSTKFLLKKDELKRIKSKLIDFSTRRWEKQPIDLPSAGSIFKRPKPDFFVGTTIENLGLKGFSIGEAQISTKHAGFIINKGNATFKDVISLIEYVKRIVKDKYNVDLQVEPEIWK

Annotated regions:
phrase: YILFPKTLNAFVNALSQLVKRDIPFRIIGQGTNLIISDEPLKFVVLSTKYLNKMNFEEKNNMDLIVEAQSGVSLSALSFLLSEDGYSGLEFACGIPGSVGGGVYMNAGAYGGEMKDVVLETTVYDLRDGKVKT
type: DOMAIN
name: Oxid_FAD_bind_N
description: FAD linked oxidase, N-terminal

phrase: IKSKLIDFSTRRWEKQPIDLPSAGSIFKRPKPDFFVGTTIENLGLKGFSIGEAQISTKHAGFIINKGNATFKDVISLIEYVKRIVKDKYNVDLQVEPE
type: DOMAIN
name: MurB_C
description: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal

phrase: RIGGPVPYILFPKTLNAFVNALSQLVKRDIPFRIIGQGTNLIISDEPLKFVVLSTKYLNKMNFEEKNNMDLIVEAQSGVSLSALSFLLSEDGYSGLEFACGIPGSVGGGVYMNAGAYGGEMKDVVLETTVYDLRDGKVKTLNKGDLEFGYRTSILQEGSFILLSTKFLLKKDELKRIKSKLIDFST
type: DOMAIN
name: FAD-bd_PCMH
description: FAD-binding domain, PCMH-type
Protein sequence:
MNIKDLSPGELEKFVADKGLEPFRARQIGKWLYRKGARSFDEMTDLSKGTRELLKSAFSAGDSMELAEEQISTDGTRKFLFKLLDGKQIESVLIPEKGRHTLCVSSQVGCALGCTFCLTGTIGKIRNLTPSEILDQYILVDRYTGGSVTNIVFMGMGEPLDNLGNLVRALKTMTDENFLGLSPKRITVSTSGIVPRIKELGEQVSVNLAVSLNAPRDELRDVIMPINKKYPIKELIKASVKFPVPPRKALMFEYVLLSKVNDSDRDAYDLGRLLSGINCKVNLIPFNEAGPLPYRSPTRERVLSFQEILMSFGINVRIRKSRGSDILGACGQLAAEYPARKIKSEKSAARAVI

Annotated regions:
phrase: EKGRHTLCVSSQVGCALGCTFCLTGTIGKIRNLTPSEILDQYILVDRYTGGSVTNIVFMGMGEPLDNLGNLVRALKTMTDENFLGLSPKRITVSTSGIVPRIKELGEQVSVNLAVSLNAPRDELRDVIMPINKKYPIKELIKASVKFPVPPRKALMFEYVLLSKVNDSDRDAYDLGRLLSGINCKVNLIPFNEAGPLPYRSPTRERVLSFQEILMSFGINVRIRKSRGS
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: NIKDLSPGELEKFVADKGLEPFRARQIGKWLYRKGARSFDEMTDLSKGTRELLKSAFSAGDSMELAEEQISTDGTRKFLFKLLDGKQIESVLIPEKGRHTLCVSSQVGCALGCTFCLTGTIGKIRNLTPSEILDQYILVDRYTGGSVTNIVFMGMGEPLDNLGNLVRALKTMTDENFLGLSPKRITVSTSGIVPRIKELGEQVSVNLAVSLNAPRDELRDVIMPINKKYPIKELIKASVKFPVPPRKALMFEYVLLSKVNDSDRDAYDLGRLLSGINCKVNLIPFNEAGPLPYRSPTRERVLSFQEILMSFGINVRIRKSRGSDILGACGQLAAEYPARKI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: MNIKDLSPGELEKFVADKGLEPFRARQIGKWLYRKGARSFDEMTDLSKGTRELLKS
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: SSQVGCALGCTFCLTGTIGKIRNLTPSEILDQYILVDRYTGGSVTNIVFMGMGEPLDNLGNLVRALKTMTDENFLGLSPKRITVSTSGIVPRIKELGEQVSVNLAVSLNAPRDELRDVIMPINKKYPIKELIKASVKFPVPPRKALMFEYVLLSKVNDSDRD
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MSHHLNHSKGSVFGNGSLMQISKTEETKPGYMNEEGSRLHWAALLILMVIVPTIGGNILVILAVSLEKKLQYATNYFLMSLAVADLLVGLLVMPIALLTILFDTAWPLPPGLCPVWLFLDVLFSTASIMHLCAISLDRYIAIKKPIQASQYNSRATALIKISVVWLISIGIAIPVPIRGIEDGDGNSTNITCVMEPNRFRVFILFGSLAAFFIPLAIMIVTYFLTIQVLHKKAYLINNKPSQRLTWNTVSTVFQRDGTPGSSPEKVAMLDGSRKDKTLPNTSEEMLMRRMSAVGKKSVQTITNEQRASKVLGIVFFLFLVMWCPFFITNITSVLCESCRPEVIQMLMEIFVWIGYVSSGVNPLVYTLFNKTFREAFGRYITCNYRTTKPEKGLRKSSSRLSFRNSMAENSKLFMMHGMRNGINPVMYQTPMRLRNSPTQSPSAILLDTLLLTENEVNKTEEQVSYV

Annotated regions:
phrase: GNILVILAVSLEKKLQYATNYFLMSLAVADLLVGLLVMPIALLTILFDTAWPLPPGLCPVWLFLDVLFSTASIMHLCAISLDRYIAIKKPIQASQYNSRATALIKISVVWLISIGIAIPVPIRGIEDGDGNSTNITCVMEPNRFRVFILFGSLAAFFIPLAIMIVTYFLTIQVLHKKAYLINNKPSQRLTWNTVSTVFQRDGTPGSSPEKVAMLDGSRKDKTLPNTSEEMLMRRMSAVGKKSVQTITNEQRASKVLGIVFFLFLVMWCPFFITNITSVLCESCRPEVIQMLMEIFVWIGYVSSGVNPLV
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM
Protein sequence:
MNPSSSPNRSLNPTRGLNLYSTGNEVTWFSSTVDEVNELKPAKSKAFSISAQDQIYGTSSLKSRFSTHEASSEKDDSSDFTLVLPSNRMYIVIPGLMLSIFLSALDQTVITTAIPTIVANLDGGSSYSWIGTAYTLAQTSILPFCGIMSEVVGRKIVLYTSIVLFLFGSAMCGAAQNMLWLVLCRAVQGIGGGGITSLVTIVIADITPLQTRPYYTGCMGVTWGLASVMGPLIGGAISQKASWRWIFFINLPTGGLSLALLIFFLNLVPKPTVSFRVFLRDFDFVGIITITTGVVLFLVGLNIGSTTGHWAHANVLCYLIFGILCIAGFVVNEFYTTRTRIITPSAFKTLSLTSVMVTSFLHYYIVSTITYYIPVYFQNIKGDGPLMSGVHTLSLAVVSSLLSAVSGMGIGKLKNYRYPMIGGWIVLLAGTGSMIAIYYNTDISRTMGFLALTAVGTGNLFQPNLIAVQASVPPALIATSCSAFMLLRNMGASVGISMGAVIYDQQLTTLLKGTKYSAGLSYSQIASIPNVSEKNFVFNAYANAIRMIWIVNCPVAGVGMLLSFFTKQEKLSQSVTEYKEKDKGFKDAP

Annotated regions:
phrase: VIPGLMLSIFLSALDQTVITTAIPTIVANLDGGSSYSWIGTAYTLAQTSILPFCGIMSEVVGRKIVLYTSIVLFLFGSAMCGAAQNMLWLVLCRAVQGIGGGGITSLVTIVIADITPLQTRPYYTGCMGVTWGLASVMGPLIGGAISQKASWRWIFFINLPTGGLSLALLIFFLNLVPKPTVSFRVFLRDFDFVGIITITTGVVLFLVGLNIGSTTGHWAHANVLCYLIFGILCIAGFVVNEFYTTRTRIITPSAFKTLSLTSVMVTSFLHYYIVSTITYYIPVYFQNIKGDGPLMSGVHTLSLAVVSSLLSAVSGMGIGKLKNYRYPMIGGWIVLLAGTGSMIAIYYNTDISRTMGFLALTAVGTGNLFQPNLIAVQASVPPALIATSCSAFMLLRNMGASVGISMGAVIYDQQLTTLLKGTKYSAGLSYSQIASIPNVSEKNFVFNAYANAIRMIWIVNCPVAGVGMLLSFFTKQEK
type: DOMAIN
name: MFS_dom
description: Major facilitator superfamily domain
Protein sequence:
MSNTKYIFVTGGVTSSLGKGIIAASLAKLLQAQDFKVTIQKFDPYINVDPGTLNPYEHGECYVTEDGAETDLDLGHYERFLNINTSQANNVTTGRVYQSVIEKERRGEFLGKTVQVIPHITNEIKERMQLLGKTGEYDMVITEIGGTVGDIESLPYIESVRQLIWDLGKENALVIHLTLIPYLAAAGELKTKPTQHSVKTLMESGISADIIVCRTEHELSGELKEKLALFCNVKREAIIQSIDVDTIYDVPLKMLEEGLDKVVLQKLQLSPKKPLDLTSWNLFLEKFKNPKHKLKIGLVGKYVELQDSYKSIVESLIHAGAINETEIEIISVHSEHLEEGTVAAQLKGLHGLIVAPGFGERGIEGKISAIAYARENKLPFFGICLGMQMAVIEYARNQKGLQDANSTEMDPNCKHAVIDLMESQKSILNKGGTMRLGAWDCDLQPNTIVAQAYQSNKISERHRHRYEFNNAYLAQVFDEQFIIAGTNPETGLVEIIEYKNHPWFVGVQFHPEYKSTVSNPHPLFLAFVKASLTQKAKE

Annotated regions:
phrase: LKIGLVGKYVELQDSYKSIVESLIHAGAINETEIEIISVHSEHLEEGTVAAQLKGLHGLIVAPGFGERGIEGKISAIAYARENKLPFFGICLGMQMAVIEYARNQKGLQDANSTEMDPNCKHAVIDLMESQKSILNKGGTMRLGAWDCDLQPNTIVAQAYQSNKISERHRHRYEFNNAYLAQVFDEQFIIAGTNPETGLVEIIEYKNHPWFVGVQFHPEYKSTVSNPHPLFLAF
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain

phrase: LQDSYKSIVESLIHAGAINETEIEIISVHSEHLEEGTVAAQLKGLHGLIVAPGFGERGIEGKISAIAYARENKLPFFGICLGMQMAVIEYARNQKGLQDANSTEMDPNCKHAVIDLMESQKSILNKGGTMRLGAWDCDLQPNTIVAQAYQSNKISERHRHRYEFNNAYLAQVFDEQFIIAGTNPETGLVEIIEYKNHPWFVGVQFHPEYKSTVSNPHPLFLAFV
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: KYIFVTGGVTSSLGKGIIAASLAKLLQAQDFKVTIQKFDPYINVDPGTLNPYEHGECYVTEDGAETDLDLGHYERFLNINTSQANNVTTGRVYQSVIEKERRGEFLGKTVQVIPHITNEIKERMQLLGKTGEYDMVITEIGGTVGDIESLPYIESVRQLIWDLGKENALVIHLTLIPYLAAAGELKTKPTQHSVKTLMESGISADIIVCRTEHELSGELKEKLALFCNVKREAIIQSIDVDTIYDVPLKMLEEGLDKVVLQKLQ
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: KYIFVTGGVTSSLGKGIIAASLAKLLQAQDFKVTIQKFDPYINVDPGTLNPYEHGECYVTEDGAETDLDLGHYERFLNINTSQANNVTTGRVYQSVIEKERRGEFLGKTVQVIPHITNEIKERMQLLGKTGEYDMVITEIGGTVGDIESLPYIESVRQLIWDLGKENALVIHLTLIPYLAAAGELKTKPTQHSVKTLMESGISADIIVCRTEHELSGELKEKLALFCNVKREAIIQSIDVDTIYDVPLKMLEEGLDKVV
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal
Protein sequence:
MKMNSKQPRKQRKFLYNAPLHVRQKMMSAPLSKELREKYKVRNLPVRVGDKVRIMRGDFKGYEGKVVEVDLKRYRIYVEGVTLRKVNGTEVFYPIHPSNVMIIELNLDDEKRKKIIERRAG

Annotated regions:
phrase: GDKVRIMRGDFKGYEGKVVEVDLKRYRIYVEGVTLRKVNGTEVFYPIHPSNVM
type: DOMAIN
name: Ribosomal_uL24_KOW
description: Large ribosomal subunit protein uL24, KOW domain

phrase: PVRVGDKVRIMRGDFKGYEGKVVEVDL
type: DOMAIN
name: KOW
description: KOW

phrase: VGDKVRIMRGDFKGYEGKVVEVDLKRYRIYV
type: DOMAIN
name: KOW
description: KOW

phrase: GDKVRIMRGDFKGYEGK
type: CONSERVED_SITE
name: Ribosomal_uL24_CS
description: Large ribosomal subunit protein uL24, conserved site