nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MNDQSMTIRGKDRYKSGVMAYKKMGYWEPDYVPKDTDVIALFRVTPQDGVDPIEAAAAVAGESSTATWTVVWTDRLTAAEKYRAKCYRVDPVPNSPGQYFAYIAYDLDLFEPGSISNLTASIIGNVFGFKPLKGLRLEDMRLPVAYVKTFQGPATGIVVERERLDKFGRPLLGATVKPKLGLSGRNYGRVVYEALKGGLDFTKDDENINSQPFMHWRERFLYCMEAVNRAQAASGEVKGTYLNVTAATMEDMYERAEFAKELGSCIVMIDLVIGYTAIQSMAKWARKNDMILHLHRAGHSTYTRQKNHGVSFRVIAKWMRLAGVDHIHAGTVVGKLEGDPNTTRGYYDICREEFNPTKLEHGIFFDQNWASLNKMMPVASGGIHAGQMHQLLDLLGEDVVLQFGGGTIGHPMGIQAGAIANRVALEAMILARNEGRDYVAEGPEILAKAAATCTPLKSALEVWKDVTFNYESTDAPDFVPTAIAAV

Annotated regions:
phrase: GIVVERERLDKFGRPLLGATVKPKLGLSGRNYGRVVYEALKGGLDFTKDDENINSQPFMHWRERFLYCMEAVNRAQAASGEVKGTYLNVTAATMEDMYERAEFAKELGSCIVMIDLVIGYTAIQSMAKWARKNDMILHLHRAGHSTYTRQKNHGVSFRVIAKWMRLAGVDHIHAGTVVGKLEGDPNTTRGYYDICREEFNPTKLEHGIFFDQNWASLNKMMPVASGGIHAGQMHQLLDLLGEDVVLQFGGGTIGHPMGIQAGAIANRVALEAMILARNEGRDYVAEGPEILAKAAATCTPLKSALEV
type: DOMAIN
name: RuBisCO_lsu_C
description: Ribulose bisphosphate carboxylase, large subunit, C-terminal

phrase: GLDFTKDD
type: ACTIVE_SITE
name: RuBisCo_large_chain_AS
description: Ribulose bisphosphate carboxylase, large chain, active site

phrase: YWEPDYVPKDTDVIALFRVTPQDGVDPIEAAAAVAGESSTATWTVVWTDRLTAAEKYRAKCYRVDPVPNSPGQYFAYIAYDLDLFEPGSISNLTASIIGNVFGFKPLKGLRLEDMRLPVA
type: DOMAIN
name: RuBisCO_lsu_fd_N
description: Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal
Protein sequence:
MVPREAPESAQCLCPSLTIPNAKDVLRKRHKRRSRQHQRFMARKALLQEQGLLSMPPEPGSSPLPTPFGAATATEAASSGKQCLRAGSGSAPCSRRPAPGKASGPLPSKCVAIDCEMVGTGPRGRVSELARCSIVSYHGNVLYDKYIRPEMPIADYRTRWSGITRQHMRKAVPFQVAQKEILKLLKGKVVVGHALHNDFQALKYVHPRSQTRDTTYVPNFLSEPGLHTRARVSLKDLALQLLHKKIQVGQHGHSSVEDATTAMELYRLVEVQWEQQEARSLWTCPEDREPDSSTDMEQYMEDQYWPDDLAHGSRGGAREAQDRRN

Annotated regions:
phrase: KCVAIDCEMVGTGPRGRVSELARCSIVSYHGNVLYDKYIRPEMPIADYRTRWSGITRQHMRKAVPFQVAQKEILKLLKGKVVVGHALHNDFQALKYVHPRSQTRDTTYVPNFLSEPGLHTRARVSLKDLALQLLHKKIQVGQHGHSSVEDATTAMELYRLVEVQWE
type: DOMAIN
name: Exonuclease_RNaseT/DNA_pol3
description: Exonuclease, RNase T/DNA polymerase III

phrase: VAIDCEMVGTGPRGRVSELARCSIVSYHGNVLYDKYIRPEMPIADYRTRWSGITRQHMRKAVPFQVAQKEILKLLKGKVVVGHALHNDFQALKYVHPRSQTRDTTYVPNFLSEPGLHTRARVSLKDLALQLLHKKIQVGQHGHSSVEDATTAMEL
type: DOMAIN
name: Exonuclease_RNaseT/DNA_pol3
description: Exonuclease, RNase T/DNA polymerase III
Protein sequence:
MAMQVQFEASTDTSAEEESFGPEPISRLEQCGINANDVKKLEEAGYHTVESVAHAPKKELLNIKGISEAKADKILAEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSITELFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMAESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADGVGDAKE

Annotated regions:
phrase: RRSEIIQITTGSKELDKLLQGGIETGSITELFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMAESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADGVGD
type: DOMAIN
name: DNA_recomb/repair_Rad51_C
description: DNA recombination and repair protein Rad51-like, C-terminal

phrase: EIIQITTGSKELDKLLQGGIETGSITELFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMAESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQ
type: DOMAIN
name: RecA_ATP-bd
description: DNA recombination and repair protein RecA-like, ATP-binding domain

phrase: TGSITELFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGSDVLDNVAYARGFNTDHQTQLLYQASAMMAESRYALLIVDSATALYRTDYSGRGELSARQMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLRKG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: AAMFAADPKKPIGGNIIAHASTTRLYLRKGRGETRICKIYDSPCLPEAEAMFAINADGVGDAK
type: DOMAIN
name: RecA_monomer-monomer_interface
description: DNA recombination and repair protein RecA, monomer-monomer interface
Protein sequence:
MKIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQFAFVHMRENAGAVRAIEALHGHELRPGRALVVEMSRPRPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQLNGKEVKGKRINVELSTKGQKKGPGLAIQSGDKTKKPGAGDTAFPGTGGFSATFDYQQAFGNSTGGFDGQARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQPSVSLGAAYRAQPSASLGVGYRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAASSLGPYGGAQPSASALSSYGGQPAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRAAASSYNTQGAANSLGSYGAQAASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQQAASYSSQPAAYVAQPATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASMGLSGSYGAQSAAAATGSYGAAAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAAASYRGQPGNAYDGTGQPSAAYLSMSQGVVANANSTPPPYERTRLSPPRASYDDPYKKAVAMSKRYGSDRRLAELSDYRRLSESQLSFRRSPTKSSLDYRRLPDAHSDYARYSGSYNDYLRAAQMHSGYQRRM

Annotated regions:
phrase: MKIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQFAFVHMRENAGAVRAIEALHGHELRPGRALVVEMSR
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: KIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQFAFVHMRENAGAVRAIEALHGHELRPGRALVV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: KIFVGNVSAACTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQLNGKEVKGKRINV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: MKIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQFAFVHMRENAGAVRAIEALHGHELRPGRALVVEM
type: DOMAIN
name: RBM14_RRM1
description: RBM14, RNA recognition motif 1

phrase: IFVGNVSAACTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQLNGKEVKGKR
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: IFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQFAFVHMRENAGAVRAIEALHGHEL
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: WKIFVGNVSAACTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQLNGKEVKGKRINVE
type: DOMAIN
name: RBM14_RRM2
description: RBM14, RNA recognition motif 2

phrase: WKIFVGNVSAACTSQELRSLFERRGRVIECDVVKDYAFVHMEKEADAKAAIAQLNGKEVKGKRINVELST
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain
Protein sequence:
MQQEKTDIKSMNLEELKSYMESIGEKPFRAKQLYQWMHEKQAASFDEMTNLSKSLQEKLKKECHFVSLKQEAVQISKIDGTRKYLFALDDGNVIESVLMRYKHGNSVCISSQVGCRMGCRFCASTLDGLVRGLTPSEMLDQIYRITRDTGERVANVVVMGTGEPMDNFDNLLRFIELLTDENGLNISQRNVTVSTCGIVPKMRELADKKLQITLALSLHASSQEKRLELMPVANKYEIHEVIEACRYYFEQTGRRVTFEYSLVGGVNDTDEDVRRLADLIHGMNCHVNLIPVNPIKERSYVQPDHEAILNFKNRLEKNAINVTIRREMGRDIDGACGQLRKRYISHAER

Annotated regions:
phrase: YKHGNSVCISSQVGCRMGCRFCASTLDGLVRGLTPSEMLDQIYRITRDTGERVANVVVMGTGEPMDNFDNLLRFIELLTDENGLNISQRNVTVSTCGIVPKMRELADKKLQITLALSLHASSQEKRLELMPVANKYEIHEVIEACRYYFEQTGRRVTFEYSLVGGVNDTDEDVRRLADLIHGMNCHVNLIPVNPIKERSYVQPDHEAILNFKNRLEKNAINVTIRREMGR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: DIKSMNLEELKSYMESIGEKPFRAKQLYQWMHEKQAASFDEMTNLSKSLQEKLKKE
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: SSQVGCRMGCRFCASTLDGLVRGLTPSEMLDQIYRITRDTGERVANVVVMGTGEPMDNFDNLLRFIELLTDENGLNISQRNVTVSTCGIVPKMRELADKKLQITLALSLHASSQEKRLELMPVANKYEIHEVIEACRYYFEQTGRRVTFEYSLVGGVNDTDEDVRRLA
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MRILVANDDGYLAPGLAALVAVCKEFGDVEVVAPEQNASGTSNALTLTRPLSVHTAANGFRYVNGTPSDCVHVALTGLLAQRPDLVVSGINNGANMGDDTIYSGTVAAAMEGYLFGVPAIAFSLVDKGWSHLDAATRAARGVLAHVLASGWHREHWLLNVNIPSRPDAAELPLQITRLGKRHASEPVICQTSPRGEPIYWIGAAGDAREAGEGTDFHAVANGHVSITPLQVDLTDHGRLGTWSQRWQDHGSRA

Annotated regions:
phrase: ILVANDDGYLAPGLAALVAVCKEFGDVEVVAPEQNASGTSNALTLTRPLSVHTAANGFRYVNGTPSDCVHVALTGLLAQRPDLVVSGINNGANMGDDTIYSGTVAAAMEGYLFGVPAIAFSLVDKGWSHLDAATRAARGVLAHVLASGWHREHWLLNVNIPSRPDAAELPLQITRLGKRHA
type: DOMAIN
name: SurE-like_Pase/nucleotidase
description: Survival protein SurE-like phosphatase/nucleotidase

phrase: MRILVANDDGYLAPGLAALVAVCKEFGDVEVVAPEQNASGTSNALTLTRPLSVHTAANGFRYVNGTPSDCVHVALTGLLAQRPDLVVSGINNGANMGDDTIYSGTVAAAMEGYLFGVPAIAFSLVDKGWSHLDAATRAARGVLAHVLASGWHREHWLLNVNIPSRPDAAELPLQITRLGKRHASEPVICQTSPRGEPIYWIGAAGDAREAGEGTDFHAVANGHVSITPLQVDL
type: DOMAIN
name: SurE-like_Pase/nucleotidase
description: Survival protein SurE-like phosphatase/nucleotidase
Protein sequence:
MNVEKYTERVRGFIQSAQSLAMREGHQQFSPLHILKVLLDDSEGLAGGLIDRAGGNSRAILKATEEALGKMPKVSGSGAGQVYLAPATARAFDAAEKAAEKAGDSFVTVERLLLALSLDKDSEAGQLLTKGGVTPQNLNAAINALRKGRTADSATAENAYDALKKYARDLTQAARDGKLDPVIGRDEEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRILNGDVPESLKDKKLLALDMGALIAGAKYRGEFEERLKAVLNEVTAAEGGIILFIDEMHTLVGAGKADGAMDASNLLKPALARGELHCIGATTLDEYRKHVEKDAALARRFQPVFVSEPTVEDTVSILRGLKDKYEQHHGVRIADSALVAAVTLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDSMDREIVRLKIEQEALKKETDPGSKARLVTLEKELADLEEKSAALTQRWSAEKNKLSDAQKLKSELDALRIELANAQRRGEYQRAGELAYGRIPELEKKIAEIEANENSGAMVEEAVTANHIAQVVSRWTGVPVDKMLEGEKEKLLRMEEQLGQRVVGQFEAVHAVSTAVRRARAGLQDPNRPMGSFMFLGPTGVGKTELTKALAEYLFDDETAMVRIDMSEFMEKHSVARLIGAPPGYVGYDEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIVMTSNLGSEYLVNQPEGEDTGAVREQVMGMVRAHFRPEFLNRVDEIILFHRLQKSEMGRIVDIQFARLTKLLEDRKIVLDLDAAARDWLAEKGWDPAYGARPLKRVIQRSVQDPLAEMILEGSVKDGDHVAISAEGGVLTFNGKPPHTAEVEPFTGRPPKRMLN

Annotated regions:
phrase: VLIGEPGVGKTAIVEGLALRILNGDVPESLKDKKLLALDMGALIAGAKYRGEFEERLKAVLNEVTAAEGGIILFIDEMHTLVGAGKADGAMDASNLLKPALARGELHCIGATT
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: LQKSEMGRIVDIQFARLTKLLEDRKIVLDLDAAARDWLAEKGWDPAYGARPLKRVIQRSVQDPLAEMILEGSVKDGDHVA
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal

phrase: LQKSEMGRIVDIQFARLTKLLEDRKIVLDLDAAARDWLAEKGWDPAYGARPLKRVIQRSVQDPLAEMILEGSVKDGDHVAISAEGGVLT
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal

phrase: RPMGSFMFLGPTGVGKTELTKALAEYLFDDETAMVRIDMSEFMEKHSVARLIGAPPGYVGYDEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIVMTSNLGSEYLVNQPEGEDTGAVREQVMGMVRAHFRPEFLNRVDE
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: TVEDTVSILRGLKDKYEQHHGVRIADSALVAAVTLSNRYITDRFLPDKAIDLMDEAAARLKMQVDSKPEELDSMDREIVRLKIEQEALKKETDPGSKARL
type: DOMAIN
name: ClpA/ClpB_AAA_lid
description: ClpA/ClpB, AAA lid domain

phrase: DASNLLKPALAR
type: CONSERVED_SITE
name: ClpA/B_CS1
description: ClpA/B, conserved site 1

phrase: RIDMSEFMEKHSVARLIG
type: CONSERVED_SITE
name: ClpA/B_CS2
description: ClpA/B, conserved site 2

phrase: PMGSFMFLGPTGVGKTELTKALAEYLFDDETAMVRIDMSEFMEKHSVARLIGAPPGYVGYDEGGVLTEAVRRRPYQVILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTLIVMTSNLGSEYLVNQPEGEDTGAVREQVMGMVRA
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: TKNNPVLIGEPGVGKTAIVEGLALRILNGDVPESLKDKKLLALDMGALIAGAKYRGEFEERLKAVLNEVTAAEGGIILFIDEMHTLVGAGKADGAMDASNLLKPALARGELHCIGATTLDEYRKHVEKDAALARRFQPVFVSEPTV
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: AQSLAMREGHQQFSPLHILKVLLDDSEGLAGGLIDRAGGNSRAILKATEEAL
type: DOMAIN
name: Clp_R_dom
description: Clp, repeat (R) domain

phrase: AEKAAEKAGDSFVTVERLLLALSLDKDSEAGQLLTKGGVTPQNLNAAINAL
type: DOMAIN
name: Clp_R_dom
description: Clp, repeat (R) domain

phrase: VEKYTERVRGFIQSAQSLAMREGHQQFSPLHILKVLLDDSEGLAGGLIDRAGGNSRAILKATEEALGKMPKVSGSGAGQVYLAPATARAFDAAEKAAEKAGDSFVTVERLLLALSLDKDSEAGQLLTKGGVTPQNLNAAINALRK
type: DOMAIN
name: Clp_R_dom
description: Clp, repeat (R) domain
Protein sequence:
MEKLLERVNHILEALPYITKYSGKTVVIKYGGAAMAKADLKESFAKDIVLLKYVGIHPVIVHGGGPEINRLLDSLKIPTEFIHGHRVTDTQTMEVVEMVLTGKVNKQIVSMINSQGGKAVGISGKDGNLAKAVKAPIEIELEGKAKQLFDVGLVGRIESINPEILHNLQKEGFIPVISPVAESVEGDSLNINADTFAGEIAGALKAEKLILLTDTEGILIDGKLATGLSRGKMKEYIRKGEISGGMIPKVECCLAAIDQGVNRTHIIDGRVSHSILIEIFTNQGIGSLIES

Annotated regions:
phrase: KTVVIKYGGAAMAKADLKESFAKDIVLLKYVGIHPVIVHGGGPEINRLLDSLKIPTEFIHGHRVTDTQTMEVVEMVLTGKVNKQIVSMINSQGGKAVGISGKDGNLAKAVKAPIEIELEGKAKQLFDVGLVGRIESINPEILHNLQKEGFIPVISPVAESVEGDSLNINADTFAGEIAGALKAEKLILLTDTEGILIDGKLATGLSRGKMKEYIRKGEISGGMIPKVECCLAAIDQGVNRTHII
type: DOMAIN
name: Asp/Glu/Uridylate_kinase
description: Aspartate/glutamate/uridylate kinase
Protein sequence:
MSQHHGTDTIAAVATPLGQGGVGIIRLSGPRSHAILTALFDSTSPGFSGFRPRVLHHGHIHDGTPQRRILDDVLAVHMPAPRTFTGEDVVEINCHGGPAILAAVLDAVLRQGARPAAHGEFTRRAFLNGRMDLTQAEAVAEMIAAPAAEGVRLAQARLDGMLGRHINALRERLELVRVQLCVAVDFPEDEVECLAPADFMHAVEETADAIRKLIGNYERARCWREGAQVVLAGQVNAGKSSLLNALLGRKRAIVTDVPGTTRDFLEESITLDGLAVRLVDTAGLRETGDIVEQEGVRMSRDLAAQADLVLLVVDSRLGTGPHEQELMAAMEAGSVLVVLNKTDAATEDELDRCVRSLAGRPHVAVSAREGKGMDSLAAAVREMVLRRSNALTADAAASDMAPNLRQTEALRRALEELEALAADIVSGVPYDLAGVRLESACSVLSEITGETTPDDILNRIFDSFCIGK

Annotated regions:
phrase: GAQVVLAGQVNAGKSSLLNALLGRKRAIVTDVPGTTRDFLEESITLDGLAVRLVDTAGLRETGDIVEQEGVRMSRDLAAQADLVLLVVDSRLGTGPHEQELMAAMEAGSVLVVLNKTDAATEDELDRCVRSLAGRPHVAVSAREGKGMDSLAAAVREMV
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain

phrase: QVVLAGQVNAGKSSLLNALLGRKRAIVTDVPGTTRDFLEESITLDGLAVRLVDTAGLRETGDIVEQEGVRMSRDLAAQADLVLLVVDSRLGTGPHEQELMAAMEAGSVLVVLN
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: DTIAAVATPLGQGGVGIIRLSGPRSHAILTALFDSTSPGFSGFRPRVLHHGHIHDGTPQRRILDDVLAVHMPAPRTFTGEDVVEINCHGGPAILAAVLDAVLRQGARPAAHGEFTRRAFLN
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal

phrase: REGAQVVLAGQVNAGKSSLLNALLGRKRAIVTDVPGTTRDFLEESITLDGLAVRLVDTAGLRETGDIVEQEGVRMSRDLAAQADLVLLVVDSRLGTGPHEQELMAAMEAGSVLVVLNKTDAATEDELDRCVRSLAGRPHVAVSAREGKGMDSLAAAVREM
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain

phrase: LTQAEAVAEMIAAPAAEGVRLAQARLDGMLGRHINALRERLELVRVQLCVAVDFPEDEVECLAPADFMHAVEETADAIRKLIGNYERARCWREGAQVVLAGQVNAGKSSLLNALLGRKRAIVTDVPGTTRDFLEESITLDGLAVRLVDTAGLRETGDIVEQEGVRMSRDLAAQADLVLLVVDSRLGTGPHEQELMAAMEAGSVLVVLNKTDAATEDELDRCVRSLAGRPHVAVSAREGKGMDSLAAAVREMVLRRSNALTADAAASDMAPNLRQTEALRRALEELEALAADIVSGVPYDLAGVRLESACSVLSEITGETTPDDILNRIFDSF
type: DOMAIN
name: MnmE_helical
description: MnmE, helical domain

phrase: TIAAVATPLGQGGVGIIRLSGPRSHAILTALFDSTSPGFSGFRPRVLHHGHIHDGTPQRRILDDVLAVHMPAPRTFTGEDVVEINCHGGPAILAAVLDAVLRQGARPAAHGEFTRRAFLNG
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal

phrase: AQVVLAGQVNAGKSSLLNALLGRKRAIVTDVPGTTRDFLEESITLDGLAVRLVDTAGLRETGDIVEQEGVRMSRDLAAQADLVLLVVDSRLGTGPHEQELMAAMEAGSVLVVLNKTDAATEDELDRCVRSLAGRPHVAVSAREGKGMDSLAAA
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain
Protein sequence:
MQVSNFLKPRIVDVQRINDYATKVTLEPLERGFGHTLGNALRRILLSSMPGCAIIEAQIDGVLHEYTTKEGVQEDMTEILLNLKGVAVKLHGRDEVTLNLSSKGPVTVTAGDIQLEHDVEVINPEHVIAHLTKSGELNLTMKVVRGRGYQSASMRIPKEEDERSIGHLILDASFSPIRRVTYEVDSARVEQRTDLDKLIIEIETNGTIAPDEAVRKAATILQDQLTAFVELEGKIETAKEKKAAEIDPVLLQPIDDLELTVRSANCLKAENIYYIGDLIQKTEVELLKTPNLGKKSLTEIKDVLTLRGLSLGMRLENWPPAGLREEETKVTA

Annotated regions:
phrase: QIDGVLHEYTTKEGVQEDMTEILLNLKGVAVKLHGRDEVTLNLSSKGPVTVTAGDIQLEHDVEVINPEHVIAHLTKSGELNLTMKVVRGRGYQSASMRIPKEEDERSIGHLILDASF
type: DOMAIN
name: DNA-dir_RNA_pol_insert
description: DNA-directed RNA polymerase, insert domain

phrase: ATKVTLEPLERGFGHTLGNALRRILLSSMPGCAIIEAQIDGVLHEYTTKEGVQEDMTEILLNLKGVAVKLHGRDEVTLNLSSKGPVTVTAGDIQLEHDVEVINPEHVIAHLTKSGELNLTMKVVRGRGYQSASMRIPKEEDERSIGHLILDASFSPIRRVTYEVDSARVEQRTDLDKLIIEIETNGTIAPDEAVRKAATILQDQLTAFVE
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: AEIDPVLLQPIDDLELTVRSANCLKAENIYYIGDLIQKTEVELLKTPNLGKKSLTEIKDVL
type: DOMAIN
name: RNAP_asu_C
description: RNA polymerase, alpha subunit, C-terminal

phrase: EPLERGFGHTLGNALRRILLSSMPGCAIIEAQIDGVLHEYTTKEGVQEDMTEILLNLKGVAVKLHGRDEVTLNLSSKGPVTVTAGDIQLEHDVEVINPEHVIAHLTKSGELNLTMKVVRGRGYQSASMRIPKEEDERSIGHLILDASFSPIRRVTYEVDSARVEQRTDLDKLIIEIETNGTIAPDEAVRKAATILQDQ
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type
Protein sequence:
MDKLVIRGGKQICGTIPASGSKNSALPIIAATLLTPDGTFAIDRTPDLKDVRTFIQLLNYLGAETSFENNLLKVSTGQLKSIEAPYELVKKMRASIYVLGPLLARFGHTRVSLPGGCAFGPRPVDLHIMVMEKLGATVTIEKGFINARVNGSRLRGTHIDFPISSVGATGNALMASVMAKGTTILDNAALEPEIECLCNFLVKMGAKIDGIGTTTLVIDGVDQLKAVEFENIFDRIEAGTLLCAAAITGGSVTVTSVAPEQLASVLDAFRQSGCTVTTNGNSVTLTAPAELNPVDITARPYPEFPTDMQAQWMALMTQARGDSTIIDRIYLERFNHIPELNRLGAHIEIRDNWALVHGPQELTGTKVMSTDLRASACLVLAGLVAKDTTEVLRVYHLDRGYEAIEKKLTALGADIRREKYQEFS

Annotated regions:
phrase: RGGKQICGTIPASGSKNSALPIIAATLLTPDGTFAIDRTPDLKDVRTFIQLLNYLGAETSFENNLLKVSTGQLKSIEAPYELVKKMRASIYVLGPLLARFGHTRVSLPGGCAFGPRPVDLHIMVMEKLGATVTIEKGFINARVNGSRLRGTHIDFPISSVGATGNALMASVMAKGTTILDNAALEPEIECLCNFLVKMGAKIDGIGTTTLVIDGVDQLKAVEFENIFDRIEAGTLLCAAAITGGSVTVTSVAPEQLASVLDAFRQSGCTVTTNGNSVTLTAPAELNPVDITARPYPEFPTDMQAQWMALMTQARGDSTIIDRIYLERFNHIPELNRLGAHIEIRDNWALVHGPQELTGTKVMSTDLRASACLVLAGLVAKDTTEVLRVYHLDRGYEAIEKK
type: DOMAIN
name: Enolpyruvate_Tfrase_dom
description: Enolpyruvate transferase domain
Protein sequence:
MKTAVIASLIAGAAAFAPAKNAARTSVATNMAFEDELGAQPPLGFFDPLGLVADGDQEKFDRLRYVEIKHGRISMLAVVGYLVQEAGVRLPGTIDYSGKTFAEIPKFAAFKEIPAGGLVQLLFFIGVLESSVMRDLTGEAEFVGDFRNGAIDFGWDTFDEETQFKKRAIELNQGRAAQMGILAFMVHEQLGVSLLPQ

Annotated regions:
Protein sequence:
MVDVEKMSDAELRAELNVRGANVGPVTGTTRSLYEKKLKKLLSGGAKTPARPTVAKPAPKPTPKSAPAPKSPKSPPARRSIPRAAATAANSTINSTFNRSEIEEMSDSDDDMRDDDDDDEEILSPKSKQSSFRSANSTASSVGRGRPVSSTPNKRLSPVYKPSPVPKNTPRTTSSSSKTTINTTTTRIPSTPRRITSVPGLITDFTPSFSTFGSDRPGATPPRKSIYTSKVSKVLHDLGNTTGEEDDDDEFEGQETSRIIYKTEEPSRRGIVKNAWNKVLGYGFDASKNPGDSYDLRAGASRIRVQKNPRTGKVTVKQTNIFNEAIYFALYVILILFVVLGIAYALTTTHRPKTADFSGYWGVLKAAGRDSLNFFYNYAILPVVSLGIFVVLGAGIYFGHRKYKEAKEQEEAKLYELIERITELIRESSIDGDPYVSQPHVRDVLFPPAKRRSAELARWEQAVKFIDTNESRVATDVLVLPSGNECAVWKWIGNQSQKRW

Annotated regions:
phrase: MVDVEKMSDAELRAELNVRGANVGPVTGTTRSLYEKKLKKLLSG
type: DOMAIN
name: LEM_dom
description: LEM domain

phrase: DVEKMSDAELRAELNVRGANVGPVTGTTRSLYEKKLKKL
type: DOMAIN
name: LEM_dom
description: LEM domain

phrase: VDVEKMSDAELRAELNVRGANVGPVTGTTRSLYEKKLKKLLSG
type: DOMAIN
name: LEM_dom
description: LEM domain
Protein sequence:
MVREEVAGSTQTLQWKCVESRVDSKRLYYGRFILSPLRKGQADTVGIALRRALLGEIEGTCITRAKFGXVPHEYSTIAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTXQPIANLTEPIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLHAEEEGTSFEENKNRFTPPLFTFQKRLTNLKKNKKGIPLNYIFIDQLELTSRTYNCLKRANIHTLLDLLSKTEEDLMRIDSFRMEDRKHIWDTLEKHLPIDLLKNKLSF

Annotated regions:
phrase: IPLNYIFIDQLELTSRTYNCLKRANIHTLLDLLSKTEEDLMRIDSFRMEDRKHIWDTL
type: DOMAIN
name: RNAP_asu_C
description: RNA polymerase, alpha subunit, C-terminal

phrase: XVPHEYSTIAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTXQPIANLTEPIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDA
type: DOMAIN
name: DNA-dir_RNA_pol_insert
description: DNA-directed RNA polymerase, insert domain

phrase: PLRKGQADTVGIALRRALLGEIEGTCITRAKFGXVPHEYSTIAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTXQPIANLTEPIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDL
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: YGRFILSPLRKGQADTVGIALRRALLGEIEGTCITRAKFGXVPHEYSTIAGIEESVQEILLNLKEIVLRSNLYGVRDASICVKGPRYITAQDIILPPSVEIVDTXQPIANLTEPIDFCIDLQIKRDRGYQTELRKNYQDGSYPIDAVSMPVRNVNYSIFSCGNGNEKHEILFLEIWTNGSLTPKEALYEASRNLIDLFLPFLH
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type
Protein sequence:
MKKQLIIGTRSSPLALWQAEFTKAELSRHFPDLEITLKLVKTTGDVLLDSPLSKIGDMGLFTKDIEKFLIAKEIDLAVHSLKDVPTATPEGLIISAFTEREDTRDVIISKTGAKLLDLPKNAKVATSSLRRMSQLKSLRPDFEICDIRGNLNTRFKKFDEGEFDAMMLAYAGVYRLNFSDRISEILPHEIMLPAVGQGALGIETRVDDEQTREIVKVMNHSTTEYCCKAERALLRHLQGGCQIPIGAYASFKNGTLHLLAFVGSTDGTIGIRDEITKTGLTSPSQAEEAGIELAKELLKQGAEKILSEIRKSC

Annotated regions:
phrase: YCCKAERALLRHLQGGCQIPIGAYASFKNGTLHLLAFVGSTDGTIGIRDEITKTGLTSPSQAEEAGIELAKELL
type: DOMAIN
name: Porphobilinogen_deaminase_C
description: Porphobilinogen deaminase, C-terminal

phrase: ERALLRHLQGGCQIPI
type: BINDING_SITE
name: Porphobilin_deaminase_cofac_BS
description: Porphobilinogen deaminase, dipyrromethane cofactor binding site

phrase: LIIGTRSSPLALWQAEFTKAELSRHFPDLEITLKLVKTTGDVLLDSPLSKIGDMGLFTKDIEKFLIAKEIDLAVHSLKDVPTATPEGLIISAFTEREDTRDVIISKTGAKLLDLPKNAKVATSSLRRMSQLKSLRPDFEICDIRGNLNTRFKKFDEGEFDAMMLAYAGVYRLNFSDRISEILPHEIMLPAVGQGALGIETRVDDEQT
type: DOMAIN
name: Porphobilin_deaminase_N
description: Porphobilinogen deaminase, N-terminal
Protein sequence:
MIKLENIKKSFITGGVSSEVLKGINLEIKKGEFVAIIGQSGSGKSTLMNILGCLDTPTSGKYLLDSLDISKFKKDELSNLRLKKFGFIFQRYNLLSSNDTKSNVALPGIYAGMSKADRINRAKDILVKLGLETKFDTMPNHLSGGQQQRVSIARALMNGGEILLCDEPTGALDSSSGVMVMQILDSLHKDGHTIIVVTHDKDIAAWADRIIEIKDGNIISDTRKNSQIYELKQNLKEIKPSLKAIRDQFFESFVMSLGAIKSHKLRSFLTMLGIIIGIASVICVVALAKGSQQKILSDINNMGTNTITIFPGKGFGDMHSGRVRSLSIDDSNLLGKLDFVDFSTPRMNTSGLLTYANQSFSGSLRSGSEYSLAISGLKIEKGRDFTKDDIINSRSNIIIDQFTKDAFFKDVDPIGKVILFNKQPFTIVGLVKRDETSFSGDNLTVYAPYTTTMNKLTGDRDIRSIMLKLKDGVNAQVAEQSIIEVLKIRRGSKDFFTRNSDTIRQTIESTMNTMSLLISGIALISLMVGGIGVMNIMLVSVFERTKEIGIRMAIGAKSKDIMTQFLIEAILLCAIGGSIGIGLAYAIGYGFNVFGGDFKMIFSTASIFIALGVSSLIGIVFGYIPARNASKLNPIDALLRE

Annotated regions:
phrase: LSGGQQQRVSIARA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: KGEFVAIIGQSGSGKSTLMNILGCLDTPTSGKYLLDSLDISKFKKDELSNLRLKKFGFIFQRYNLLSSNDTKSNVALPGIYAGMSKADRINRAKDILVKLGLETKFDTMPNHLSGGQQQRVSIARALMNGGEILLCDEPTGALDSSSGVMVMQILDSLHKDGHTIIVVTHDKDIAAWADRIIEIKDG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: SFLTMLGIIIGIASVICVVALAKGSQQKILSDINNMGTNTITIFPGKGFGDMHSGRVRSLSIDDSNLLGKLDFVDFSTPRMNTSGLLTYANQSFSGSLRSGSEYSLAISGLKIEKGRDFTKDDIINSRSNIIIDQFTKDAFFKDVDPIGKVILFNKQPFTIVGLVKRDETSFSGDNLTVYAPYTTTMNKLTGDRDIRSIMLKLKDGVNAQVAEQSI
type: DOMAIN
name: MacB_PCD
description: MacB-like periplasmic core domain

phrase: IALISLMVGGIGVMNIMLVSVFERTKEIGIRMAIGAKSKDIMTQFLIEAILLCAIGGSIGIGLAYAIGYGFNVFGGDFKMIFSTASIFIALGVSSLIGIVFGYIPARNASKLN
type: DOMAIN
name: ABC3_permease_C
description: ABC3 transporter permease, C-terminal

phrase: LKGINLEIKKGEFVAIIGQSGSGKSTLMNILGCLDTPTSGKYLLDSLDISKFKKDELSNLRLKKFGFIFQRYNLLSSNDTKSNVALPGIYAGMSKADRINRAKDILVKLGLETKFDTMPNHLSGGQQQRVSIARALMNGGEILLCDEP
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: IKLENIKKSFITGGVSSEVLKGINLEIKKGEFVAIIGQSGSGKSTLMNILGCLDTPTSGKYLLDSLDISKFKKDELSNLRLKKFGFIFQRYNLLSSNDTKSNVALPGIYAGMSKADRINRAKDILVKLGLETKFDTMPNHLSGGQQQRVSIARALMNGGEILLCDEPTGALDSSSGVMVMQILDSLHKDGHTIIVVTHDKDIAAWADRIIEIKDGNIISDTRKNSQIYELKQNLKEIK
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: IKLENIKKSFITGGVSSEVLKGINLEIKKGEFVAIIGQSGSGKSTLMNILGCLDTPTSGKYLLDSLDISKFKKDELSNLRLKKFGFIFQRYNLLSSNDTKSNVALPGIYAGMSKADRINRAKDILVKLGLETKFDTMPNHLSGGQQQRVSIARALMNGGEILLCDEPTGALDSSSGVMVMQILDSLHKDGHTIIVVTHDKDIAAWADRIIEIKDGN
type: DOMAIN
name: MacB-like_ATP-bd
description: MacB-like, ATP-binding domain
Protein sequence:
MLAKRIIPCLDTIGKKVVKGTSFINVRVVGDAKELARRYEKEGADEIVLLDITASEEGRSTFVDVVTDVASELFVPLTVGGGIKNIEDVRRLLKAGADKVSINTSAVENPDLINQIASEFGSQCLVVAIDVKRRGKKSWEVYIKGGKVPTGIDFKDWVIEVEKRGAGEILLTSIDADGHLSGYDYELLEYALSYSNLPLIASGGAGSLEDLYKALKIGVDAVLAASIFHFGTYSIPEVKRYLREKGIWVRLD

Annotated regions:
Protein sequence:
MNTESVVEFLGNVTLLQRLPSSSLKRISEVVVFKGYDRGDYVVRENQNVDGVYFLLQGQAQVLRSAGEENYQEFPLKRYDFFGHGIFGDVYSADVVAVTELTCLLLMSDHRALLEIKSVSDSDKERCLVEDILYLEPLDLNVYRGFTPPNAPTYGKVYGGQLVGQALAAASKTVETMKIVHNFHCYFLLVGDINIPIIYDVNRLRDGNNFATRSVDARQKGKTIFTLFASFQKKQQGFIHQESTMPHTPAPETLLPREEMLERLVTEPLLPRDYRNQVATEISVPFPIDIRFCEPNRSTKQNKSPPRLKYWFRAKGKLSDDDQALHRCVVAFASDLIFATISLNPHRREGMSVAALSLDHSMWFHRPVRADDWLLFVIVSPTATESRGFATGKMFNRKGELVVSLTQEAVLREAVTIKPSFGAKL

Annotated regions:
phrase: TKQNKSPPRLKYWFRAKGKLSDDDQALHRCVVAFASDLIFATISLNPHRREGMSVAALSLDHSMWFHRPVRADDWLLFVIVSPTATESRGFATGKMFNRKGELVVSLTQEA
type: DOMAIN
name: ACOT8-like_C
description: Acyl-CoA thioesterase-like, C-terminal domain

phrase: YDRGDYVVRENQNVDGVYFLLQGQAQVLRSAGEENYQEFPLKRYDFFGHGIFGDVYSADVVAVTELTCLL
type: DOMAIN
name: cNMP-bd_dom
description: Cyclic nucleotide-binding domain

phrase: LLQRLPSSSLKRISEVVVFKGYDRGDYVVRENQNVDGVYFLLQGQAQVLRSAGEENYQEFPLKRYDFF
type: DOMAIN
name: cNMP-bd_dom
description: Cyclic nucleotide-binding domain

phrase: LLQRLPSSSLKRISEVVVFKGYDRGDYVVRENQNVDGVYFLLQGQAQVLRSAGEENYQEFPLKRYDFFGHGIFGDVYSADVVAVTELTCLLLMSDHRALL
type: DOMAIN
name: cNMP-bd_dom
description: Cyclic nucleotide-binding domain

phrase: LLQRLPSSSLKRISEVVVFKGYDRGDYVVRENQNVDGVYFLLQGQAQVLRSAGEENYQEFPLKRYDFFGHGIFGDVYSADVVAVTELTCLLLMSDHRALLEIKSVSDSDKERCLVE
type: DOMAIN
name: cNMP-bd_dom
description: Cyclic nucleotide-binding domain

phrase: PPNAPTYGKVYGGQLVGQALAAASKTVETMKIVHNFHCYFLLVGDINIPIIYDVNRLRDGNNFATRSVDARQKGKTIFTLFASF
type: DOMAIN
name: TesB_ACOT8-like_N
description: Acyl-CoA thioesterase-like, N-terminal HotDog domain