nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTLQFVDPENYETLLAAKKEHLNKQFAIFNPPALECFASPKLHYRMRAELRVWHDGDELYYIMFDKKTKQKFRVEQFPPASELINNLMPVLLELVKSSEILRYKLFQIDFLSNLKGQVIVSLLYHKQLDDNWLVEAKRIKAELLKQFDINFIGRARKQKILLDYDYVIEELQVDGNKLFYQQIENSFTQPNAKVCEKMLEWAIDCTRDSQGDLLELYCGNGNFSLALAKNFNKVLATEIAKPSVESAQFNMAQNGINNVTVIRMSAEEFTQAINGEREFYRLKEITLSDYQCNTILVDPPRSGLDDETVKMVQHYDNILYISCNADTLSRNLEVLSKTHEIKRFALFDQFPYTYHSEAGVYLVKR

Annotated regions:
phrase: DPPRSGLDDETVKMVQHYDNILYISCNAD
type: ACTIVE_SITE
name: MeTrfase_TrmA_AS
description: RNA methyltransferase TrmA, active site
Protein sequence:
MAASGTSATFRASVSSAPSSSSQLTHLKSPFKAVKYTPLPSSRSKSSSFSVSCTIAKDPPVLMAAGSDPALWQRPDSFGRFGKFGGKYVPETLMHALSELESAFYALATDDDFQRELAGILKDYVGRESPLYFAERLTEHYRRENGEGPLIYLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRGVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWGGKPDVLVACVGGGSNAMGLFHEFVNDTEVRMIGVEAAGFGLDSGKHAATLTKGDVGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFFKDMGRAEYYSITDEEALEAFKRVSRLEGIIPALETSHALAYLEKLCPTLSDGTRVVLNFSGRGDKDVQTVAKYLDV

Annotated regions:
phrase: RESPLYFAERLTEHYRRENGEGPLIYLKREDLNHTGAHKINNAVAQALLAKRLGKKRIIAETGAGQHGVATATVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRGVHSGTATLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGKETRKQALEKWGGKPDVLVACVGGGSNAMGLFHEFVNDTEVRMIGVEAAGFGLDSGKHAATLTKGDVGVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFFKDMGRAEYYSITDEEALEAFKRVSRLEGIIPALETSHALAYLEKLCPTLSDGTRVVLNFS
type: DOMAIN
name: TrpB-like_PALP
description: Tryptophan synthase beta chain-like, PALP domain

phrase: LNHTGAHKINNAVA
type: CONSERVED_SITE
name: Trp_synth_b_CS
description: Tryptophan synthase, beta chain, conserved site
Protein sequence:
MLWAHCGRFLRYHLLPLLLCRLPFLLLFQRPQWAHGLDIVEEDEWLREIQGATYQLSIVRQAMQHAGFQVRAASVMTRRNAVDLDRPPLWSGSLPHLPVYDVRSPRPLRPPSSQHHAVSPELPSRDGIRWQYQELQYLVEEQRRRNQSRNAIPRPSFPPPDPPSQPAEDARDADAERTESPHSAESTVRHDASENAVRRRHERRRYNALTVRSRDSLLLTRIRFSNQRCFGRGRLRHPAGSGPNTGGPRPGGAGLRQLRQQLTVRWQLFRLRCHGWTQQVSSQIRTRWEESNVVSQTATRVRTWFVERTTFWRRTWVPRQNPAAEAQELAVIPPAPTVLRQNEEPRQQLTGEETRNSTHTQREEVEDVSREGAREGNDGSRASGNDERRNNAGRYDDDHEVQEPQVTYPAGQGELNRRSQEENEEGGPCESPPMTTNTLTVACPPREPPHRALFRLCLGLWVSSYLVRRPMTI

Annotated regions:
Protein sequence:
MAKDPVRVLVTGAAGQIGYALVPMIARGVMLGADQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAAPNCKVLVVANPANTNALILKEYAPSIPEKNISCLTRLDHNRALGQISERLNVQVSDVKNVIIWGNHSSSQYPDVNHATVATPAGEKPVRELVADDAWLNGEFISTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVACKNGEWSIVQGLPIDEFSRKKLDATAEELSEEKALAYSCLT

Annotated regions:
phrase: VRVLVTGAAGQIGYALVPMIARGVMLGADQPVILHMLDIPPAAEALNGVKMELVDAAFPLLKGVVATTDAVEACTGVNVAVMVGGFPRKEGMERKDVMSKNVSIYKSQASALEKHAAPNCKVLVVANPANTNALILKEYAPSIPEKN
type: DOMAIN
name: Lactate/malate_DH_N
description: Lactate/malate dehydrogenase, N-terminal

phrase: LTRLDHNRALGQ
type: ACTIVE_SITE
name: Malate_DH_AS
description: Malate dehydrogenase, active site

phrase: TRLDHNRALGQISERLNVQVSDVKNVIIWGNHSSSQYPDVNHATVATPAGEKPVRELVADDAWLNGEFISTVQQRGAAIIKARKLSSALSAASSACDHIRDWVLGTPEGTWVSMGVYSDGSYNVPAGLIYSFPVACKNGEWSIVQGLPIDEFSRKKLDATAEELSEEK
type: DOMAIN
name: Lactate/malate_DH_C
description: Lactate/malate dehydrogenase, C-terminal
Protein sequence:
MRSHFCTEISEKDVGKIVKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALEVRSEFVLVAKGKVRLRGAGLENPKLKTGKIEIVLEELIIENKSATPPIEIGNKHVNEDLRLKYRYLDLRSPNSYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPSRVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFTQIDAEMSFCDENDVMGVVEDLLQEIFKAVGHTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGDCFRDSSNAIFSNTAKDPKNKRIKALNVKGADALFSRSVLKELEEFVRQFGAKGLAYLQIKEDEIKGPLVKFLSEKGLKNILERTDAQVGDIVFFGAGDKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMFEKTENGYHAAHHPFTMPKNIECEDIEEVEAHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIGFDRLIMLMTKSHSIRDVIAFPKTQKASCLLTNAPSPINEEQLRELHIRLRK

Annotated regions:
phrase: RSHFCTEISEKDVGKIVKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALEVRSEFVLVAKGKVRLRGAGLENPKLKTGKIEIVLEELIIENKSATPPIEIGNKHVNEDLRLKYRYLDLRS
type: DOMAIN
name: Asp-tRNA-ligase_1_N
description: Aspartate-tRNA ligase, type 1, anticodon recognition domain

phrase: FSNTAKDPKNKRIKALNVKGADALFSRSVLKELEEFVRQFGAKGLAYLQIKEDEIKGPLVKFLSEKGLKNILERTDAQVGDIVFFGAGDKKIVLDY
type: DOMAIN
name: GAD_dom
description: GAD domain

phrase: FKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPSRVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFTQIDAEMSFCDENDVMGVVEDLLQEIFKAVGHTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGDCFRDSSNAIFSNTAKDPKNKRIKALNVKGADALFSRSVLKELEEFVRQFGAKGLAYLQIKEDEIKGPLVKFLSEKGLKNILERTDAQVGDIVFFGAGDKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMFEKTENGYHAAHHPFTMPKNIECEDIEEVEAHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIGFDRLIMLMTKSHSIRDVIAFPKTQ
type: DOMAIN
name: AspRS_core
description: Aspartate-tRNA ligase, type 1, core domain

phrase: FKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPSRVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFTQIDAEMSFCDENDVMGVVEDLLQEIFKAVGHTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGDCFRDSSNAIFSNTAKDPKNKRIKALNVKGADALFSRSVLKELEEFVRQFGAKGLAYLQIKEDEIKGPLVKFLSEKGLKNILERTDAQVGDIVFFGAGDKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMFEKTENGYHAAHHPFTMPKNIECEDIEEVEAHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIGFDRLIMLMTKSHSIRDVIAF
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: NEDLRLKYRYLDLRSPNSYEIFKLRSEVALITRNTLAQKGFLEIETPILSKTTPEGARDYLVPSRVHEGEFFALPQSPQLFKQLLMVGGMDRYFQIARCFRDEDLRADRQPEFTQIDAEMSFCDENDVMGVVEDLLQEIFKAVGHTISKPFKRMPYKEAMENYGSDKPDLRFELPLIEVGDCFRDSSNAIFSNTAKDPKNKRIKALNVKGADALFSRSVLKELEEFVRQFGAKGLAYLQIKEDEIKGPLVKFLSEKGLKNILERTDAQVGDIVFFGAGDKKIVLDYMGRLRLKVAETLDLIDKDALNFLWVVNFPMFEKTENGYHAAHHPFTMPKNIECEDIEEVEAHAYDVVLNGVELGGGSIRIHKEEMQKKVFEKINIHEEEAQKKFGFLLEALKFGAPPHGGFAIGFDRLIMLMTKSHSIRDVIAFPKT
type: DOMAIN
name: Aa-tRNA-synt_II
description: Aminoacyl-tRNA synthetase, class II (D/K/N)

phrase: VKVAGWCNTYRDHGGVVFIDLRDKSGLVQLVCDPSSKAYEKALEVRSEFVLVAKGKVRLRGAGLENPKLKTGKIEIVLEEL
type: DOMAIN
name: NA-bd_OB_tRNA
description: OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
Protein sequence:
MAIGIVGRKRGMTRVFTEEGGSIPVTVVEADPNRVTQVKTEESDGYRAVQVTAGRRKPQRVRKPEAGHFARAGVEAGRGVWEFRLDKGQRASDEEMPETGGSIDVGGFEAGQKVDVTGTTKGRGFAGTVRRHNFRAQRNTHGNSKSHRVPGSIGQCQSPGRVFKGKKMAGQMGNRRATIQNLEVVRVDSERNLLLIRGAVPGAVGSDLIVRPASKA

Annotated regions:
phrase: FEAGQKVDVTGTTKGRGFAGTVR
type: CONSERVED_SITE
name: Ribosomal_uL3_CS
description: Large ribosomal subunit protein uL3, conserved site
Protein sequence:
MGITARKVLGTPYANGAKLMFLGAGELGKETMIEAQRMGIEIVAVDRYANSPGMQVAHRSYVTNMKSERALLAIVEKEKPDAIIPEIEAINTDTLFKLEKEGFFVAPCANAVWTAMHRERLREAIASTGARTSKYEYATDLESFKAACKKIGFPCVSKPIMSSSGKGSYVLKSSKDVEKAFKEAAKARGSSDKIIVEEFIDFDVEITALSVRYLNGKGKPESKFVRPLGHYQIEGDYHASWHPWTDATDKKIDKLEKEIYDYAGRIMDKLGGYGLFAHEMFVDTKNGKVYANETACRPHDTGLVTIASMPFGYSEFALHAKAVLGIPIACEGKVIQPRSTAASHVILSHTEGWYPQFKVDGAYAPDTNVLIFGKPEAYEERRLGVVLATAGTVEDAKKKAQKAAHTVKVSANDKWAGQEITEKHYR

Annotated regions:
phrase: IASTGARTSKYEYATDLESFKAACKKIGFPCVSKPIMSSSGKGSYVLKSSKDVEKAFKEAAKARGSSDKIIVEEFIDFDVEITALSVRYLNGKGKPESKFVRPLGHYQIEGDYHASWHPWTDATDKKIDKLEKEIYDYAGRIMDKLGGYGLFAHEMFVDTKNGKVYANETACRPHDTGLVTIA
type: DOMAIN
name: ATP-grasp_carboxylate-amine
description: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type

phrase: FLGAGELGKETMIEAQRMGIEIVAVDRYANSPGMQVAHRSYVTNMKSERALLAIVEKEKPDAIIPEIEAINTDTLFKLEKEGFFVAPCANA
type: DOMAIN
name: PurT/PurK_preATP-grasp
description: PurT/PurK-like, preATP-grasp domain

phrase: AASHVILSHTEGWYPQFKVDGAYAPDTNVLIFGKPEAYEERRLGVVLATAGTVEDAKKKAQKAAHT
type: DOMAIN
name: PurT_C
description: PurT, C-terminal

phrase: REAIASTGARTSKYEYATDLESFKAACKKIGFPCVSKPIMSSSGKGSYVLKSSKDVEKAFKEAAKARGSSDKIIVEEFIDFDVEITALSVRYLNGKGKPESKFVRPLGHYQIEGDYHASWHPWTDATDKKIDKLEKEIYDYAGRIMDKLGGYGLFAHEMFVDTKNGKVYANETACRPHDTGLVTIASMPFGYSEFALHAKAV
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold
Protein sequence:
MRSEKEQRTGSRERGSVEIQFRDCQDNAAVNPKHKEEKKEIFSKVVIRRLPPSLSKDQLQEHLSPLPSFDYFEFFPADQSLYPHLFSRAYINFKNPEDIIIFRDRFDGYVFIDNKGQEYPAVVEFAPFQKVSKKKLKKKDAKAGTIEEDPEYRRFLENYSCDEEKSMANPETLLGEIEAKTRELIAKRTTPLLEYIKNKKLEKQRIREEKREERRRRELEKKRQREEEKRKRREEERQKRKEAEKQKKLSEKEIKIKLLKKCDRDDDVDSDRLKDKGDSGETEKNRWEKPGGHTKSKDSKDNRSQMENDKEQREGHGRRQRDKDHRGRDEERKRQRHHYEFDKFMRRKEETKWGKGYCQDRAKKDQHHGYSYCPETGDKLGKEDREDMGSRKERIRNKDRPAMQLYQPGARNRKRMGSGNKTFDFPPISPEHAGEHCYKTVIGTGSEKSADE

Annotated regions:
phrase: SKVVIRRLPPSLSKDQLQEHLSPLPSFDYFEFFPADQSLYPHLFSRAYINFKNPEDIIIFRDRFDGYVFIDNKGQEYPAVVEFAPFQKVSKKKLKKKDAKAGTIEEDPEYRRFLENYSCDEEKSMANPETLLGEIEAKTRELIAKRTTPLLEYIKNK
type: DOMAIN
name: UPF3_dom
description: UPF3 domain
Protein sequence:
MTKLIFMGTPDFSATVLKGLLTDDRYEILAVVTQPDRAVGRKKVIQETPVKQAAKEAGLSIYQPEKLSGSPEMEDLMKLGADGIVTAAFGQFLPSKLLDSMDFAVNVHASLLPRHRGGAPIHYALIQGDEEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGTLFEKLALVGRDLLLDTLPAYIAGDIKPEPQDTSQVTFSPNIKSEEEKLNWNKTNRQLFNQIRGMNPWPVAHTFLKGDRFKIYEALPVEGQGNPGEILSIGKKELIVATAEGALSLKQVQPAGKPKMDIASFLNGVGRTLTVGERFGD

Annotated regions:
phrase: GVTIMEMVKEMDAGDMISRRSIP
type: ACTIVE_SITE
name: GART_AS
description: Phosphoribosylglycinamide formyltransferase, active site

phrase: EEEKLNWNKTNRQLFNQIRGMNPWPVAHTFLKGDRFKIYEALPVEGQGNPGEILSIGKKELIVATAEGALSLKQVQPAGKPKMD
type: DOMAIN
name: Met-tRNA-FMT_C
description: Methionyl-tRNA formyltransferase, C-terminal domain

phrase: NIKSEEEKLNWNKTNRQLFNQIRGMNPWPVAHTFLKGDRFKIYEALPVEGQGNPGEILSIGKKELIVATAEGALSLKQVQPAGKPKMDIASFLNG
type: DOMAIN
name: Formyl_trans_C
description: Formyl transferase, C-terminal

phrase: KLIFMGTPDFSATVLKGLLTDDRYEILAVVTQPDRAVGRKKVIQETPVKQAAKEAGLSIYQPEKLSGSPEMEDLMKLGADGIVTAAFGQFLPSKLLDSMDFAVNVHASLLPRHRGGAPIHYALIQGDEEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGTLFEKLALVGRDLLLDTLPAYIAGDIKPEPQDTSQVTFSPN
type: DOMAIN
name: Met-tRNA-FMT_N
description: Methionyl-tRNA formyltransferase, N-terminal domain

phrase: LIFMGTPDFSATVLKGLLTDDRYEILAVVTQPDRAVGRKKVIQETPVKQAAKEAGLSIYQPEKLSGSPEMEDLMKLGADGIVTAAFGQFLPSKLLDSMDFAVNVHASLLPRHRGGAPIHYALIQGDEEAGVTIMEMVKEMDAGDMISRRSIPITDEDNVGTLFEKLALVGRDLLL
type: DOMAIN
name: Formyl_transf_N
description: Formyl transferase, N-terminal
Protein sequence:
MIVGVLALQGGVEEHLTALEALGATTRKVRVPKDLDGLEGIVIPGGESTVLDKLARTFDVAEPLANLIRDGLPVFATCAGLIYLAKHLDNPARGQQTLELLDVVVRRNAFGTQRESFDTTVDVSFDGATFPGVQASFIRAPIVTAFGPTVEAIAALNGGEVVGVRQGNIIALSFHPEETGDYRIHQAWLNLIGKRTELAI

Annotated regions:
phrase: GIVIPGGEST
type: CONSERVED_SITE
name: PdxT/SNO_CS
description: PdxT/SNO family, conserved site
Protein sequence:
MAAAPATLALDPQPQEKQKDASESSELSRLRAELAGALAEMETMKAVAEVSESTKAEAVAAVQRQCQEEVASLQAILKDSISSYETQIAALKQERQQQQQDFEEKDRELGHLKQLLARAHPLDSLEKQMEKAHEDSEKLREIVLPMEQEITELKGKLQRAEELIQEIQRRPRQPASLHGSTELLPLSRNPSPPLEPLEEPSGDAGPAAEAFAHNCDDSASISSFSLGGAAGSASLRGPQGLSPEQEETASLVSTGTLVPEGIFLPPPGYQLVPDSQWEQLQVEGRQLQKELESVSRERDELQEGLRRSNEDCAKQMQVLLAQVQNSEQLLRTLQGTVSQAQERVQLQMAELATSHKCLSQEVKRLNEENQGLRAEQLPSSALQGSEQREDQDEALPSSIQELHLLVQNTRQQARARQQAQEHEAERLRIEIVKLREALDEETAAKASLERQLRVQREETDVLEASLCSLRIETERVQQEQRKAQLTDLLSEQRAKTLRLQAELETSEQVQRDFVRLSQALQVRLERIRQAETLQQVRSILDEAPLRDIRDIKDS

Annotated regions:
phrase: QEQRKAQLTDLLSEQRAKTLRLQAELETSEQVQRDFVRLSQALQVRLERIRQA
type: DOMAIN
name: Rabaptin_Rab5-bd_dom
description: Rabaptin, GTPase-Rab5 binding domain

phrase: EQLQVEGRQLQKELESVSRERDELQEGLRRSNEDCAKQMQVLLAQVQNSEQLLRTLQGTVSQAQERVQLQMAELATSHKCLSQEVKRLNEENQGLRAEQLPSSALQGSEQREDQDEALPSSIQELHLLVQNTRQQARARQQAQEHEAERLRIEIVKLREALDEETAAKASLERQLRVQREETDVLEASLCSLRIETERVQQEQRK
type: DOMAIN
name: Rabaptin_Rab5-bd_dom
description: Rabaptin, GTPase-Rab5 binding domain

phrase: SSELSRLRAELAGALAEMETMKAVAEVSESTKAEAVAAVQRQCQEEVASLQAILKDSISSYETQIAALKQERQQQQQDFEEKDRELGHLKQLLARAHPLDSLEKQMEKAHEDSEKLREIVLPMEQEITELKGKLQRAEELIQEI
type: DOMAIN
name: Rabaptin_coiled-coil
description: Rabaptin coiled-coil domain
Protein sequence:
MSNRKYFGTDGIRGRVGDAPITPDFVLKLGWAAGKVLARHGSRKIIISKDTRISGYMLESALEAGLAAAGLSALFTGPMPTPAVAYLTRTFRAEAGIVISASHNPFYDNGIKFFSIDGTKLPDAVEEAIEAEMEKEISCVDSAELGKASRIVDAAGRYIEFCKATFPNELSLSELKIVVDCANGATYHIAPNVLRELGANVIAIGCEPNGVNINAEVGATDVRALQARVLAEKADLGIAFDGDGDRVIMVDHEGNKVDGDQIMYIIAREGLRQGQLRGGAVGTLMSNMGLELALKQLGIPFARAKVGDRYVLEKMQEKGWRIGAENSGHVILLDKTTTGDGIVAGLQVLAAMARNHMSLHDLCSGMKMFPQILVNVRYTAGSGDPLEHESVKAVTAEVEAALGNRGRVLLRKSGTEPLIRVMVEGEDEAQVTEFAHRIADAVKAV

Annotated regions:
phrase: DGDQIMYIIAREGLRQGQLRGGAVGTLMSNMGLELALKQLGIPFARAKVGDRYVLEKMQEKGWRIGAENSGHVILLDKTTTGDGIVAGLQVLAAMARNHMSLHDLCSG
type: DOMAIN
name: A-D-PHexomutase_a/b/a-III
description: Alpha-D-phosphohexomutase, alpha/beta/alpha domain III

phrase: RYIEFCKATFPNELSLSELKIVVDCANGATYHIAPNVLRELGANVIAIGCEPNGVNINAEVGATDVRALQARVLAEKADLGIAFDGDGDRVIMVDHE
type: DOMAIN
name: A-D-PHexomutase_a/b/a-II
description: Alpha-D-phosphohexomutase, alpha/beta/alpha domain II

phrase: RKYFGTDGIRGRVGDAPITPDFVLKLGWAAGKVLARHGSRKIIISKDTRISGYMLESALEAGLAAAGLSALFTGPMPTPAVAYLTRTFRAEAGIVISASHNPFYDNGIKFFSIDGTKLPDAVEEAIEAEMEK
type: DOMAIN
name: A-D-PHexomutase_a/b/a-I
description: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I

phrase: LVNVRYTAGSGDPLEHESVKAVTAEVEAALGNRGRVLLRKSGTEPLIRVMVEGEDEAQVTEFAHRIAD
type: DOMAIN
name: A-D-PHexomutase_C
description: Alpha-D-phosphohexomutase, C-terminal

phrase: GIVISASHN
type: CONSERVED_SITE
name: A-D-PHexomutase_CS
description: Alpha-D-phosphohexomutase, conserved site
Protein sequence:
MLRNGNEGMSTIPGFSQIQFEGFCRFINQALAEELNKFPAIKDPDHEIAFQLFAKGYQLLEPSIKERDAVYESLTYSSELYVSARLIFGFDVQKQTISIGNIPIMNSLGTFIINGIYRIVINQILLSPGIYYRSELDHKGISIYTGTIISDWGGRSELAIDKKERIWARVSRKQKISILVLSSAMGSNLREILDNVSYPEIFLSFPNAKEKKRIESKEKAILEFYQQFACVGGDLVFSESLCEELQKKFFQQKCELGRIGRRNMNRRLNLDIPQNNTFLLPRDVLAATDHLIGMKFGTGILDDDDMNHLKNKRIRSVADLLQDQFGLALGRLQHAVQKTIRRVFIRQSKPTPQTLVTPTSTSILLITTYETFFGTYPLSQVFDQTNPLTQTVHGRKVSCLGPGGLTGRTSSFRSRDIHPSHYGRICPIDTSEGINVGLTGSLAIHARINHLWGSIESPFYEISAEKAKKKKSRQVVYLSPNRDEYYMIAAGNSLSLNQGIQEEQVVPARYRQEFLTIAWEQIHVRSIFPFQYFSIGGSLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQTALDSGVSVIAEREGKILSTDSHKILLSSSGKTLSIPLVNHRRSNKNNCMHQKSRVPRGKSIKKGQILAEGAATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTDTTSQGSAEKITKEIPHLEAHLLRNLDRNGVVRLGSWVETSDILVGKLTPQIASESSYIAEAGLLRAIFGLEVSTSKETSLKLPIGGRGRVIDVKWIQRDPLDIMVRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFESSLGLAGDLLKKHYRIAPFDERYEQEASRKLVFSELYEASKETKNPWVFEPEYPGKSRIFDGRTGDPFEQPVLIGKSYILKLIHQVDEKIHGRSTGPYSLVTQQPVRGRAKQGGQRVGEMEVWALEGFGVAHILQEILTYKSDHLIARQEILNATIWGKRIPNHEDPPESFRVLVRELRSLALELNHFLVSEKNFQVTREEV

Annotated regions:
phrase: GDKVAGRHGNKG
type: CONSERVED_SITE
name: RNA_pol_bsu_CS
description: RNA polymerase, beta subunit, conserved site

phrase: AEREGKILSTDSHKILLSSSGKTLSIPLVNHRRSNKNNCMHQKSRVPRGKSIKKGQILAEGAATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTDTTSQGSAEKITKEIPHLEAHLLRNLDRNGVVRLGSWVETSDILVGKLTPQIASESSYIAEAGLLRAIFGLEVSTSKETSLKLPIGGRGRVIDVKWIQRDPLDIMVRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFESSLGLAGDLLKKHYRIAPFDERYEQEASRKLVFSELYEASKETKNPWVFEPEYPGKSRIFDGRTGDPFEQPVLIGKSYILKLIHQVDEKIHGRSTGPYSLVTQQPVRGRA
type: DOMAIN
name: DNA-dir_RNAP_su2_dom
description: DNA-directed RNA polymerase, subunit 2, hybrid-binding domain

phrase: SPGIYYRSELDHKGISIYTGTIISDWGGRSELAIDKKERIWARVSRKQKISILVLSSAMGSNLREILDNVSYPEIFLSFPNAKEKKRIESKEKAILEFYQQFACVGGDLVFSESLCEELQKKFFQQKCELGRIGRRNMNRRLNLDIPQNNTFLLPRDVLAATDHLIGMKFGTGILDDDDMNHLKNKRI
type: DOMAIN
name: RNA_pol_Rpb2_2
description: RNA polymerase Rpb2, domain 2

phrase: GGQRVGEMEVWALEGFGVAHILQEILTYKSDHLIARQEILNATIWGKRIPNHEDPPESFRVLVRELRSLALELNH
type: DOMAIN
name: RNA_pol_Rpb2_7
description: RNA polymerase Rpb2, domain 7

phrase: QVFDQTNPLTQTVHGRKVSCLGPGGLTGRTSSFRSRDIHPSHYGRICPIDTSEGINVGLTGSLAIHAR
type: DOMAIN
name: RNA_pol_Rpb2_3
description: RNA polymerase Rpb2, domain 3
Protein sequence:
MDQEIKTPSPSFEARQKDNPSFPFHTSLRSQRSSGSLQRAPSAPSYPRSYYNPQGHTRKHTSPNPASSNSSLEHQYSNPSPVLAASEFVLQPMGMGEANDNRRSIPSRPISEKSSEEFVGAPFDSSGFSGFMSSIGVGSPRGVKISAPENPVHVTHVGYDNTTGQFTGLPKEWQRMINESGITKKEQEQHPQTIVDIVGFYKENTDKGGEEIFDKFDHAKVPEIAMARPVPPPLSPGFSTPNYGSMTPMMSPPASPRFPANNESNFENPRSPPPIPRGTPSMGSQSKPELNGIIPNRPAPRPPVSMQGPSRIAPPPSAAGKDSGIGMTRQSDDLPALAYVPPTVQDNGPMLPEEHRSRSRSNSKVNGTSPYATPVPASPQVYQQQILHHQEQAMQQAQQAMSRSISVKKPTQQATPPTPQGQFSANGLPHPAQQPRQVPGPRPRQRTRQSTGFDIVARLKQICTEGDPRDIYKELTKIGQGASGGVYTGYERGTNRLVAIKQMNLEQQPKKDLIINEILVMKDSSHPNIVNFIDSFLVTGELWVIMEYMEGGSLTDVVTFNIMSEGQIAAVCRETLKGLQHLHSKGVIHRDIKSDNILLSMDGNIKLTDFGFCAQINEAHNKRTTMVGTPYWMAPEVVTRKEYGRKVDIWSLGIMAIEMIEGEPPYLTESPLRALYLIATNGTPAIKNEQDLSPVFRDFLYFALKVDPEKRASAHDLLRHDFMKQCTELVQLAPLVRSARNARAQEKAQKALS

Annotated regions:
phrase: ISAPENPVHVTHV
type: DOMAIN
name: CRIB_dom
description: CRIB domain

phrase: IGQGASGGVYTGYERGTNRLVAI
type: BINDING_SITE
name: Protein_kinase_ATP_BS
description: Protein kinase, ATP binding site

phrase: KISAPENPVHVTHVGYDNTTGQFTGLPKEWQRMINESGITKKEQEQHPQTIVDIVGF
type: DOMAIN
name: CRIB_dom
description: CRIB domain

phrase: YKELTKIGQGASGGVYTGYERGTNRLVAIKQMNLEQQPKKDLIINEILVMKDSSHPNIVNFIDSFLVTGELWVIMEYMEGGSLTDVVTFNIMSEGQIAAVCRETLKGLQHLHSKGVIHRDIKSDNILLSMDGNIKLTDFGFCAQINEAHNKRTTMVGTPYWMAPEVVTRKEYGRKVDIWSLGIMAIEMIEGEPPYLTESPLRALYLIATNGTPAIKNEQDLSPVFRDFLYFALKVDPEKRASAHDLLRHDF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: YKELTKIGQGASGGVYTGYERGTNRLVAIKQMNLEQQPKKDLIINEILVMKDSSHPNIVNFIDSFLVTGELWVIMEYMEGGSLTDVVTFNIMSEGQIAAVCRETLKGLQHLHSKGVIHRDIKSDNILLSMDGNIKLTDFGFCAQINEAHNKRTTMVGTPYWMAPEVVTRKEYGRKVDIWSLGIMAIEMIEGEPPYLTESPLRALYLIATNGTPAIKNEQDLSPVFRDFLYFALKVDPEKRASAHDLLRHDF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: ISAPENPVHVTHVGYDNTTGQFTGLPKEWQRMINESGITKKEQ
type: DOMAIN
name: PAK_BD
description: p21 activated kinase binding domain

phrase: VIHRDIKSDNIL
type: ACTIVE_SITE
name: Ser/Thr_kinase_AS
description: Serine/threonine-protein kinase, active site

phrase: YKELTKIGQGASGGVYTGYERGTNRLVAIKQMNLEQQPKKDLIINEILVMKDSSHPNIVNFIDSFLVTGELWVIMEYMEGGSLTDVVTFNIMSEGQIAAVCRETLKGLQHLHSKGVIHRDIKSDNILLSMDGNIKLTDFGFCAQINEAHNKRTTMVGTPYWMAPEVVTRKEYGRKVDIWSLGIMAIEMIEGEPPYLTESPLRALYLIATNGTPAIKNEQDLSPVFRDFLYFALKVDPEKRASAHDLLRHDF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: ISAPENPVHVTHVGYDNTTGQFTGLPKEWQRMINE
type: DOMAIN
name: CRIB_dom
description: CRIB domain
Protein sequence:
MKRAPTKQPAKPAARGGERAQGRVIAAHGRHYIVAPADGGPMLQCFPRRKKSEVAVGDRVAYERTSADQGVIVEIGERRNLLYRSDQFKSKLFAANLDQLLIVLATEPYFSEDLLGRALIAAEANELKPIVVLNKIDVEAALPVARERLAPYRALGYDVLELSVKSAPDDARTQLAPRLAGHSTILLGQSGMGKSTLVNLLVPNAEAATREISAALNSGRHTTTFTRLYPLQDGGALIDSPGFQEFGLYHLTEGRLERAFPEFRPLLAHCRFYNCHHLHEPGCAILEALADGRIAPTRHALYAQLVHEASQIVR

Annotated regions:
phrase: AQGRVIAAHGRHYIVAPADGGPMLQCFPRRKKSEVAVGDRVAYERTSADQGVIVEIGERRNLLY
type: DOMAIN
name: RsgA_N
description: Ribosome biogenesis GTPase RsgA, N-terminal

phrase: SDQFKSKLFAANLDQLLIVLATEPYFSEDLLGRALIAAEANELKPIVVLNKIDVEAALPVARERLAPYRALGYDVLELSVKSAPDDARTQLAPRLAGHSTILLGQSGMGKSTLVNLLVPNAEAATREISAALNSGRHTTTFTRLYPLQDGGALIDSPGFQE
type: DOMAIN
name: G_CP_dom
description: Circularly permuted (CP)-type guanine nucleotide-binding (G) domain

phrase: ANLDQLLIVLATEPYFSEDLLGRALIAAEANELKPIVVLNKIDVEAALPVARERLAPYRALGYDVLELSVKSAPDDARTQLAPRLAGHSTILLGQSGMGKSTLVNLLVPNAEAATREISAALNSGRHTTTFTRLYPLQDGGALIDSPGF
type: DOMAIN
name: RsgA_GTPase_dom
description: RsgA GTPase domain

phrase: GERRNLLYRSDQFKSKLFAANLDQLLIVLATEPYFSEDLLGRALIAAEANELKPIVVLNKIDVEAALPVARERLAPYRALGYDVLELSVKSAPDDARTQLAPRLAGHSTILLGQSGMGKSTLVNLLVPNAEAATREISAALNSGRHTTTFTRLYPLQDGGALIDSPGFQEFG
type: DOMAIN
name: RsgA_GTPase_dom
description: RsgA GTPase domain
Protein sequence:
MNTPTATLNAPAADAESAAASAADKKAAFELNKLSKRLHRQVGQAITDFNMIQEGDRVMVCLSGGKDSYGMLDILLGLQQRAPITFSIVAVNLDQKQPGFPEHILPAYLKARGVEFHIENQDTYSIVKRVIPEGKTMCSLCSRLRRGILYRVADELGATKIALGHHRDDFLGTVFLNMFFGSKLKGMPPKLVSDDGRHTVIRPLAYVAETDLERWAEHRAFPIIPCTLCGTQDNLQRVQIKHMLRDWDQRFPGRIDNMHRAFSQVVPSHLMDRALFPFETLVPTGVADPAGDRAFDEDDSELCAPSGSADAAGDEVSVPVALIRRV

Annotated regions:
phrase: VMVCLSGGKDSYGMLDILLGLQQRAPITFSIVAVNLDQKQPGFPEHILPAYLKARGVEFHIENQDTYSIVKRVIPEGKTMCSLCSRLRRGILYRVADELGATKIALGHHRDDFLGTVFLNMFFGSKLKGMPPKLVSDDGRHTVIRPLAYVAETDLERWAEHR
type: DOMAIN
name: TilS/TtcA_N
description: tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal
Protein sequence:
MEVVVKDWGVSLGYSRGALVIKKRGGVDRIPLFQVDRIWILTGGVSISSRLVRALSHHFIDVVFFDAKGNPVARLFPPEANGTVTHRRAQYEAYLTGRGFELAKLVTYGKLINQARALRRLGQWKREHYGALAEAASKIADLAGRIPSCADVQCVLGHEGAAASLYWDAVSKTTGLPGRNPEAADPLNLALNYGYGVLKYAVWRQAVIHGLDPYAGYIHADKSGRPSLVLDLMEEFRPHVDLLVIRLRPSADWADGGVLKREIRAMLVEEWTGERLEPVIARQVGLAVAHLHGQRAYTPHQL

Annotated regions:
Protein sequence:
MLKNFIQKGKLINSISSSSSFQSSTFLNNNGFNSGAWVGSRFFSLEQLKKKTKNQKLINWVEEQAKLCKPDNIYICDGSEEEFKKFTDDMVKSGTLIKLNSKRPNSFLARSDPSDVARVESRTYICAKTKEDAGPTNNWMDPNQMKQTLKPLFNGSMKGRTMYVMPFSMGPLGSDISHIGVQVTDSPFVVCNMKIMTRMGDKVLNQIKENDDFVPCLHSVGAPLAKGQKDSHWPCNPNKYIVHYPEERSIQSFGSGYGGNALLGKKCFSLRIASSMAKEGGWLAEHMLILSLTNDKGEKKYIAAAFPSACGKTNLAMANSVLPGYKVQVCGDDIAWMTMRNGQLYAINPEFGFFGVAPGTSASSNPNALAAISKNTLFTNVALTPDNDVWWEGLSSPPPTAIDWLGNEWHPNGEGNNTFAAHPNSRFTAPLSQCPSIDPEWNNPTGVPISAVIFGGRRSSTVPLVYQALNWKHGVFMGASTASELTAAAEGTVGTLRHDPFAMLPFCGYNMGDYFAHWLSMEQKAGSNADKLPKIFYVNWFRKNKTSGKFLWPGFGENVRVLKWIFDRCNSTLDTTDGKATQTPIGFVPSNNSIDLNGLEINKSSLKELFSLNKSEWLHDLKSMRQFCQQFGDRLPNEIKNQMDQLENRLNKD

Annotated regions:
phrase: NWVEEQAKLCKPDNIYICDGSEEEFKKFTDDMVKSGTLIKLNSKRPNSFLARSDPSDVARVESRTYICAKTKEDAGPTNNWMDPNQMKQTLKPLFNGSMKGRTMYVMPFSMGPLGSDISHIGVQVTDSPFVVCNMKIMTRMGDKVLNQIKENDDFVPCLHSVGAPLAKGQKDSHWPCNPNKYIVHYPEERSIQSFGSGYGGNALLGKKCFSLRIASSMA
type: DOMAIN
name: PEP_carboxykinase_GTP_N
description: Phosphoenolpyruvate carboxykinase, GTP-utilising, N-terminal

phrase: WLAEHMLILSLTNDKGEKKYIAAAFPSACGKTNLAMANSVLPGYKVQVCGDDIAWMTMRNGQLYAINPEFGFFGVAPGTSASSNPNALAAISKNTLFTNVALTPDNDVWWEGLSSPPPTAIDWLGNEWHPNGEGNNTFAAHPNSRFTAPLSQCPSIDPEWNNPTGVPISAVIFGGRRSSTVPLVYQALNWKHGVFMGASTASELTAAAEGTVGTLRHDPFAMLPFCGYNMGDYFAHWLSMEQKAGSNADKLPKIFYVNWFRKNKTSGKFLWPGFGENVRVLKWIFDRCNSTLDTTDGKATQTPIGFVPSNNSIDLNGLEINKSSLKELFSLNKSEWLHDLKSMRQFCQQFGDRLPNEIKNQMDQLEN
type: DOMAIN
name: PEP_carboxykinase_GTP_C
description: Phosphoenolpyruvate carboxykinase, C-terminal P-loop domain

phrase: FPSACGKT
type: CONSERVED_SITE
name: PEP_carboxykin_GTP_CS
description: Phosphoenolpyruvate carboxykinase, GTP-utilising, conserved site
Protein sequence:
MTDPYSEPSSSAKRRSAALTDGPDRAPARAMLKGVGFSDEDLARPIIGVATTWIETMPCNLNQRALATAIKASIREAGATPMEFNTISISDGVSMGTEGMRASLVSREVIADSIELVARGHLFDGIVCLVGCDKTIPGSVMALCRLDIPGLVLYNGSIAPGRWRGRDVTILDVFEAVGAHASGTMSAGELHSLEGAACPGAGACGGQFTANTMATAVDFLGLGPARLGGIPATDPGKLDAATEAGRIAARLVEADIRPSALLTKASLENAIASVAASGGSTNAVLHLLAIASELGIELALEDFERIAARTPVIADLKPGGRFVATDMYRAGGSALLMRELVDAGLIDGSARTVDGVTIGEIAGGAEESAGQEVIRRISDPLKATGGLAILRGNLAPEGCVVKLAGHERRFHRGPARVFESEEECFAAVKAQAIRAGDVVVIRYEGPAGGPGMREMLHVTAAIVGEGLGEDIALLTDGRFSGATHGLMVGHVAPEAARGGPIAALRDGDIIEVDVEARELRVVLDADALAKRLGDWVAPAPRYGNGVFAKYAASVSSASRGAVTRP

Annotated regions:
phrase: ALLTDGRFSGA
type: CONSERVED_SITE
name: DiOHA_6PGluconate_deHydtase_CS
description: Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site

phrase: EVIRRISDPLKATGGLAILRGNLAPEGCVVKLAGHERRFHRGPARVFESEEECFAAVKAQAIRAGDVVVIRYEGPAGGPGMREMLHVTAAIVGEGLGEDIALLTDGRFSGATHGLMVGHVAPEAARGGPIAALRDGDIIEVDVEARELRVVLDADALAKRLGDWVAPAPRYGNGVFAKYAASVSSASRG
type: DOMAIN
name: ILV_EDD_C
description: Dihydroxy-acid/6-phosphogluconate dehydratase, C-terminal

phrase: RPIIGVATTWIETMPCNLNQRALATAIKASIREAGATPMEFNTISISDGVSMGTEGMRASLVSREVIADSIELVARGHLFDGIVCLVGCDKTIPGSVMALCRLDIPGLVLYNGSIAPGRWRGRDVTILDVFEAVGAHASGTMSAGELHSLEGAACPGAGACGGQFTANTMATAVDFLGLGPARLGGIPATDPGKLDAATEAGRIAARLVEADIRPSALLTKASLENAIASVAASGGSTNAVLHLLAIASELGIELALEDFERIAARTPVIADLKPGGRFVATDMYRAGGSALLMRELVDAGLIDGSARTVDGVTIG
type: DOMAIN
name: ILV_EDD_N
description: Dihydroxy-acid/6-phosphogluconate dehydratase, N-terminal

phrase: CDKTIPGSVM
type: CONSERVED_SITE
name: DiOHA_6PGluconate_deHydtase_CS
description: Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site
Protein sequence:
MKKYDRGWASLETGAALLIVMLLIAWGAGIWQDYIQTKGWQTEARLVSNWTSAARSYIGKNYTTLQGSSTTTTPAVITTTMLKNTGFLSSGFTETNSEGQRLQAYVVRNAQNPELLQAMVVSSGGTPYPVKALIQMAKDITTGLGGYIQDGKTATGALRSWSVALSNYGAKSGNGHIAVLLSTDELSGAAEDTDRLYRFQVNGRPDLNKMHTAIDMGSNNLNNVGAVNAQTGNFSGNVNGVNGTFSGQVKGNSGNFDVNVTAGGDIRSNNGWLITRNSKGWLNETHGGGFYMSDGSWVRSVNNKGIYTGGQVKGGTVRADGRLYTGEYLQLERTAVAGASCSPNGLVGRDNTGAILSCQSGTWKSSSASIWTNIKTFTLYPKNTQVLGRFKLCINTYRIDGREMAETEVVPIDMPDSNGEMIWQAKNYTQYSSYFMKITCLK

Annotated regions:
phrase: DYIQTKGWQTEARLVSNWTSAARSYIGKNYTTLQGSSTTTTPAVITTTMLKNTGFLSSGFTETNSEGQRLQAYVVRNAQNPELLQAMVVSSGGTPYPVKALIQMAKDITTGLGGYIQDGKTATGALRSWSVALSNYGAKSGNGHIAVLLSTDELSGAAEDTDRLYRFQVNGRPDLNKMHTAIDMGSNNLNNVGAVNAQTGNFSGNVNGVNGTFSGQVKGNSGNFDVNVTAGGDIRSNNGWLITRNSKGWLNETHGGGFYMSDGSWVRSVNNKGIYTGGQVKGGTVRADGRLYTGEYLQLERTAVAGASCSPNGLVGRDNTGAILSCQS
type: DOMAIN
name: Shufflon_N
description: Bacterial shufflon protein, N-terminal