nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MRSDIVKKGFEKAPQRSLFKAMGYTDEEIRRPLIAVVNSWNEVVPGHIHLDKIAEAVKAGIRLAGATPMEFNVIGVCDGIAMGHIGMKYSLITRELIADSIEAMVMAHQFDGMVLIPNCDKIVPGMLMAAARVNIPSILISGGPMLAGRVDNKVCDLNSVFEAVGAYSAGKITDEELFALEENACPGCGSCSGMFTANTMNCLSEVLGMALPGNGTIPAVMAARIRLAKMAGMKIVELVERDIKPSDILTIEAFENALTVDMALGGSTNTILHLPAIANELGIKLNLDIINDISDKTPNLCKLSPAGHYHIEDLYFAGGVQAVMNELSKKGLIHLDLLTVTGKSVGENIKDAKVKDYNVIRPIDNPYSETGGLVIVRGNLAPDGAVVKKSAVPPKLMRHRGPARVFESGEEVFEAILKGKIQKGDVIVIRYEGPKGGPGMREMLSPTSALAGVGLIEDVALITDGRFSGATRGACFGHVSPEAAERGPIAAVQDGDIISIDIENKTLTLEVPEEEIKRRLESLGPFEPKVKKGYLYRYSKLVRSASTGAILE

Annotated regions:
phrase: NVIRPIDNPYSETGGLVIVRGNLAPDGAVVKKSAVPPKLMRHRGPARVFESGEEVFEAILKGKIQKGDVIVIRYEGPKGGPGMREMLSPTSALAGVGLIEDVALITDGRFSGATRGACFGHVSPEAAERGPIAAVQDGDIISIDIENKTLTLEVPEEEIKRRLESLGPFEPKVKKGYLYRYSKLVRSASTG
type: DOMAIN
name: ILV_EDD_C
description: Dihydroxy-acid/6-phosphogluconate dehydratase, C-terminal

phrase: RPLIAVVNSWNEVVPGHIHLDKIAEAVKAGIRLAGATPMEFNVIGVCDGIAMGHIGMKYSLITRELIADSIEAMVMAHQFDGMVLIPNCDKIVPGMLMAAARVNIPSILISGGPMLAGRVDNKVCDLNSVFEAVGAYSAGKITDEELFALEENACPGCGSCSGMFTANTMNCLSEVLGMALPGNGTIPAVMAARIRLAKMAGMKIVELVERDIKPSDILTIEAFENALTVDMALGGSTNTILHLPAIANELGIKLNLDIINDISDKTPNLCKLSPAGHYHIEDLYFAGGVQAVMNELSKKGLIHLDLLTVTGKSVGE
type: DOMAIN
name: ILV_EDD_N
description: Dihydroxy-acid/6-phosphogluconate dehydratase, N-terminal

phrase: ALITDGRFSGA
type: CONSERVED_SITE
name: DiOHA_6PGluconate_deHydtase_CS
description: Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site

phrase: CDKIVPGMLM
type: CONSERVED_SITE
name: DiOHA_6PGluconate_deHydtase_CS
description: Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site
Protein sequence:
MPWIQIKLNATNENAELIGDMLMEETGALSVTFLDAHDTPVFEPLPGETRLWGDTDVLALYDAEADTQLIMSQIKASNMLAEGFAYKIEQLEDKDWEREWMDNFHPMKFGQRLWICPSWRDIPDPTAVNVMLDPGLAFGTGTHPTTALCLEWLESLDLSGKTVIDFGCGSGILAIAAIKLGAEKVIGIDIDPQALLASKDNAQRNGVADQLDVYLPQDQPEGLLADVVVANILAAPLRELSSIIKGLVKPNGQLAMSGVLDTQAEDVANYYRDELHIDPIVEQSEWCRISGRKQG

Annotated regions:
Protein sequence:
MLERTFSIIKPDAVKRNLIGQIVSKLEQNGLKVIASKMVFLTVQEAKGFYAEHDGKPFFDTLIKNMTAGPIVVQVLEGDDAIAKNREIMGPTDPENAPAGSIRKEYAISMQQNSVHGSDSPESAQREISYFFSEIEVFSAS

Annotated regions:
phrase: NSVHGSDS
type: ACTIVE_SITE
name: Nucleoside_diP_kinase_AS
description: Nucleoside diphosphate kinase, active site

phrase: ERTFSIIKPDAVKRNLIGQIVSKLEQNGLKVIASKMVFLTVQEAKGFYAEHDGKPFFDTLIKNMTAGPIVVQVLEGDDAIAKNREIMGPTDPENAPAGSIRKEYAISMQQNSVHGSDSPESAQREISYFFSEI
type: DOMAIN
name: NDK-like_dom
description: Nucleoside diphosphate kinase-like domain

phrase: LERTFSIIKPDAVKRNLIGQIVSKLEQNGLKVIASKMVFLTVQEAKGFYAEHDGKPFFDTLIKNMTAGPIVVQVLEGDDAIAKNREIMGPTDPENAPAGSIRKEYAISMQQNSVHGSDSPESAQREISYFFSEIEVF
type: DOMAIN
name: NDK-like_dom
description: Nucleoside diphosphate kinase-like domain
Protein sequence:
MSIFVELKSKLDQAITGVNRYNPNNVETLESCIEAMVQENQYDKDILVTTLKLYQLNPDKYNESVVKLILLKTMMMAPKSDYALAKYLIDSSRVGSPELKRIFDIGALLESCNFAVFWRLMRGDYRPLDDVNEPFRQPGEIPKIIKAVPGFEESVRNYACQVINVTFQNIEKSLLVRLLGGVSDKQVNEYARYYGWIPKENGEVYFVQNHEATIKSRNIEEKLQFDILFSLIAENV

Annotated regions:
phrase: YDKDILVTTLKLYQLNPDKYNESVVKLILLKTMMMAPKSDYALAKYLIDSSRVGSPELKRIFDIGALLESCNFAVFWRLMRGDYRPLDDVNEPFRQPGEIPKIIKAVPGFEESVRNYACQVINVTFQNIEKSLLVRLLGGVSDKQVNEYARYYGWIPKENGEVYFVQNHEATIKSRNIEE
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain

phrase: YNESVVKLILLKTMMMAPKSDYALAKYLIDSSRVGSPELKRIFDIGALLESCNFAVFWRLMRGDYRPLDDVNEPFRQPGEIPKIIKAVPGFEESVRNYACQVINVTFQNIEKSLLVRLLGGVSDKQVNEYARYYGWIPKENGEVYFVQNH
type: DOMAIN
name: CSN8_PSD8_EIF3K
description: CSN8/PSMD8/EIF3K
Protein sequence:
MLKTRIIPCLDVADGRVVKGVNFVDLRDAGDPVEAARAYDAAGADELCFLDIHATHENRGTMYDLVTRTAEQCFMPLTVGGGVRTQQDVRALLLAGADKVSFNSAAVADPNVVAEAADRFGSQCIVVAIDAKTVAPGRWEIFTHGGRRATGIDAVEFAQDVAAKGAGEILLTSMDRDGTRSGFNLPLTRAISDAVRIPVIASGGVGTLDHLVEGVTEGGASAVLAASIFHFGEFTIGEAKAHMAAAGIPVRLA

Annotated regions:
Protein sequence:
MEILVPGQATLAQLEAIWREGRRARLAPEARPAVEAAAARVAAAAAGTAPVYGVNTGFGKLASLKIAPADTAQLQRNLILSHCCGVGEPMPPSTARLMMALKLLSLGRGASGVRWKIVALLEGMLAAGVTPVIPAQGSVGASGDLAPLAHMAAVMIGEGEAEVGGRRLPGAAALAHAGLAPVALGPKEGLALINGTQFSTAYALAGLFEGWRAAQAALVISALSTDAIMGSTAPLRPEIHALRGHAGQIEAAATMRALLEGSAIRESHREGDQRVQDPYCIRCQPQVTGAAMDVLRMAAGTLATEANAATDNPLVLSDGRIVSGGNFHAEPVGFAADMIALALSEIGAIAQRRVALMVDPTLSFDLPPFLTPEPGLNSGLMIAEVTTAALMSENKHMAAPTVTDSTPTSANQEDHVSMAAHGARRLGRMVENLAVILGTEAICAAQGVEFRAPLATSAPLGAVLARLRAEVPRLGADRILAPDLAAAARLVRTGALARAAGLPLPAL

Annotated regions:
phrase: GSVGASGDLAPLAHMA
type: ACTIVE_SITE
name: Phe/His_NH3-lyase_AS
description: Phenylalanine/histidine ammonia-lyases, active site
Protein sequence:
MNSFTSALRPGPLGCSLALLLVVATAFPTSAPVREDSNTKASPDKTLTPPGRTIESIRSILETIKELRKEMCDHDVNCMNRKEALAEVNLHLPRLIEEDGCFPPAVNNETCLLRITSGLMEFRMYLEHLQAKFRSDEENTRVSMVLKNIQHLIKTLRPKVKNLNEEATLKPAVAVSLMENLQQKNQWLKTTTIHFILRGLTNFLEFTLRAVDLMECGCPCLRNFMGSASHGQNTPSCPLDT

Annotated regions:
phrase: CFPPAVNNETCLLRITSGLMEFRMY
type: CONSERVED_SITE
name: IL6/GCSF/MGF_CS
description: Interleukin-6/GCSF/MGF, conserved site
Protein sequence:
MKQLRLEPVVQVRGEINIPGSKSISNRALLLATLAQGTTTLTNLLDSDDIRHMLASLKQLGVEYRLSHNNTVCELAGLGGVMSSKQAQTLFLGNAGTAMRPLCAALTLGQGEFTLTGEPRMEERPIGDLVDALRQLGANIVYLKNDGFPPLTINATGLNGGDVEIVGDLSSQFLTALLMVAPLAKGSVNIHVKGELVSKPYIDITLALMAQFGVKVINHHYARFEIPAGQHYVSPGKVLVEGDASSASYFLAAGAIKGGEVKVTGVGRLSIQGDVKFADVLEKMGADIEWGDDYIIARGAPLTAVDLDMNHIPDAAMTIATAALFAKGTTVIRNIYNWRIKETDRLAAMATELRKVGAEVEEGNDYIKITPPAVLNTAQIDTYNDHRMAMCFSMLAFADCGITINDPDCTSKTFPDYFVQFASLKV

Annotated regions:
phrase: LFLGNAGTAMRPLC
type: CONSERVED_SITE
name: EPSP_synthase_CS
description: 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site

phrase: RIKETDRLAAMATELRKV
type: CONSERVED_SITE
name: EPSP_synthase_CS
description: 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site

phrase: PVVQVRGEINIPGSKSISNRALLLATLAQGTTTLTNLLDSDDIRHMLASLKQLGVEYRLSHNNTVCELAGLGGVMSSKQAQTLFLGNAGTAMRPLCAALTLGQGEFTLTGEPRMEERPIGDLVDALRQLGANIVYLKNDGFPPLTINATGLNGGDVEIVGDLSSQFLTALLMVAPLAKGSVNIHVKGELVSKPYIDITLALMAQFGVKVINHHYARFEIPAGQHYVSPGKVLVEGDASSASYFLAAGAIKGGEVKVTGVGRLSIQGDVKFADVLEKMGADIEWGDDYIIARGAPLTAVDLDMNHIPDAAMTIATAALFAKGTTVIRNIYNWRIKETDRLAAMATELRKVGAEVEEGNDYIKITPPAVLNTAQIDTYNDHRMAMCFSMLAFADCGITINDPDCTSKTFPDY
type: DOMAIN
name: Enolpyruvate_Tfrase_dom
description: Enolpyruvate transferase domain
Protein sequence:
MAVIISSKVLLIQLFVLVLGSFSKLSHGELWLELPLPFDWPPAEIPLPDIPSPFDGPTFVLPPPSPLPSPPPPSPSPPPPSPSPPPPSTIPLIPPFTGGFLPPLPGSKLPDFAGLLPLIPNLPDVPPIGGGPPVNQPKPSSPSPLVKPPPPPPSPCKPSPPDQSAKQPPQPPPAKQPSPPPPPPPVKAPSPSPAKQPPPPPPPVKAPSPSPATQPPTKQPPPPPRAKKSPLLPPPPPVAYPPVMTPSPSPAAEPPIIAPFPSPPANPPLIPRRPAPPVVKPLPPLGKPPIVSGLVYCKSCNSYGVPTLLNASLLQGAVVKLICYGKKTMVQWATTDNKGEFRIMPKSLTTADVGKCKVYLVKSPNPNCNVPTNFNGGKSGGLLKPLLPPKQPITPAVVPVQPPMSDLYGVGPFIFEASSKMPCDKN

Annotated regions:
Protein sequence:
MKEDLKSMSLSQMEQAFSALGEPKFRAKQVFTWLHRGARSFDEMTNLSKPLRAKLDGIYEITAPEVARKQVSQKDGTIKYLWRLSDGNCVESVVMQYHHGNTVCISSEVGCLMGCKFCASTLGGLVRRLRPSELLDQVLFSQIDSGLPISNIVLMGIGEPLDNFDAVMQFLELVNSPDGLNIGMRHISLSTCGLVDKIRLLAERKLQLTLSVSLHSPDNESRNKIMPINKRWNVEELLAACKDYYEITGRRVSFEYTMISGVSDSPEQAELLAKKLSGMGAHVNMIPLNDVAETGLHTSSREAIARFQSILQAHGITATVRRTLGSDIDASCGQLRRKYELKQ

Annotated regions:
phrase: NTVCISSEVGCLMGCKFCASTLGGLVRRLRPSELLDQVLFSQIDSGLPISNIVLMGIGEPLDNFDAVMQFLELVNSPDGLNIGMRHISLSTCGLVDKIRLLAERKLQLTLSVSLHSPDNESRNKIMPINKRWNVEELLAACKDYYEITGRRVSFEYTMISGVSDSPEQAELLAKKLSGMGAHVNMIPLNDVAETGLHTSSREAIARFQSIL
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: VGCLMGCKFCASTLGGLVRRLRPSELLDQVLFSQIDSGLPISNIVLMGIGEPLDNFDAVMQFLELVNSPDGLNIGMRHISLSTCGLVDKIRLLAERKLQLTLSVSLHSPDNESRNKIMPINKRWNVEELLAACKDYYEITGRRVSFEYTMISGVSDS
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: YHHGNTVCISSEVGCLMGCKFCASTLGGLVRRLRPSELLDQVLFSQIDSGLPISNIVLMGIGEPLDNFDAVMQFLELVNSPDGLNIGMRHISLSTCGLVDKIRLLAERKLQLTLSVSLHSPDNESRNKIMPINKRWNVEELLAACKDYYEITGRRVSFEYTMISGVSDSPEQAELLAKKLSGMGAHVNMIPLNDVAETGLHTSSREAIARFQSILQAHGITATVRRTLGS
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: DLKSMSLSQMEQAFSALGEPKFRAKQVFTWLHRGARSFDEMTNLSKPLRAKLDGIYE
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MKKEILIATHNTHKKEEIQQILGDKFTVTSLTDYDIHDEIVEDGSSFHANALIKAQYCFDKTGKPSLGDDSGLVVEALDGRPGIYSARYAGNHDFAKNMAKVLEELDGIENRKAYFVTVMCLVDEFGTNYFEGRVYGHLTKEIRGEKGFGYDPIFIPDNHEITFAQMRAEDKNKISHRKKAIEQFLRFMEN

Annotated regions:
Protein sequence:
MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAGLLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADETLPAVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLILIDRLSNVTVGAGMVHEPVSQATAAPSQFSVFELELNALVRRHFPHWGARDLLGDK

Annotated regions:
phrase: GSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAGLLPGNLDIRFVPLSALEGDN
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: MRFPVQYVNRPNLDFRGYAGTLASGRVEVGQRVKVLPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLL
type: DOMAIN
name: CysN_II
description: Sulfate adenylyltransferase subunit CysN, Domain II

phrase: DGLQAEREQGITIDV
type: CONSERVED_SITE
name: G_TR_CS
description: Tr-type G domain, conserved site

phrase: SLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAGLLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEV
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: RFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAGLLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQ
type: DOMAIN
name: CysN_GTP-bd
description: Sulfate adenylyltransferase subunit CysN, GTP-binding domain

phrase: KSLLRFLTCGSVDDGKSTLIGRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYFSTEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGIKHLVVAINKMDLVDYSEETFTRIREDYLTFAGLLPGNLDIRFVPLSALEGDNVASQSESMPWYSGPTLLEVLETVEIQ
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: AVQSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLILIDRLSNVTVGAGM
type: DOMAIN
name: CysN_NoDQ_III
description: Sulfate adenylyltransferase subunit CysN, Domain III

phrase: VDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYQVDINNLTQREVENLPLNGIGLVDLTFDEPLVLDRYQQNPVTGGLILIDRLSNVTVGAGMV
type: DOMAIN
name: GTP-eEF1A_C
description: GTP-eEF1A, C-terminal domain

phrase: RFLTCGSVDDGKS
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: EQGITIDV
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: IIADTPGHEQ
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: TGASTCELAIL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: LVVAINKMD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain
Protein sequence:
MQDQDKYAEQAASIEDPVTAEAASATTPTLEEQLAASQLLVQELQDSFLRAKAEVENFRRRAQEDVTRAHKFAIEGFAEMLLPVKDSLEMALQVETPSVESLKEGVEMTLKQLNAAFEKNRLLEIKPQQGDKLDPMKHQAMSLVPADQEPNTVVNTLQKGYLIADRLLRPALVTVAQEK

Annotated regions:
Protein sequence:
MEALRQRIEAAFEARADITPSTVDASVRDDVQNVINMLDKGEVRVAEKIDGQWHVHQWLKKAVLLSFRIFDNVVIDGAETKYFDKVPLKFAEYDEARFKAEAIRVVPSATVRKGSFIGKNTVLMPSYVNLGAYVDEGTMVDTWATVGSCAQIGKNVHLSGGVGIGGVLEPLQAGPTIIEDNCFIGARSEIVEGVVVEEGSVISMGVYIGQSTRIYDRETGEVHYGRVPAGSVVVSGNLPSACGKYSLYAAIIVKKVDAKTRGKVGINELLRIVD

Annotated regions:
phrase: LRQRIEAAFEARADITPSTVDASVRDDVQNVINMLDKGEVRVAEKIDGQWHVHQWLKKAVLLSFR
type: DOMAIN
name: THP_succinylTrfase_dom1
description: Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1

phrase: VDEGTMVDTWATVGSCAQIGKNVHLSGG
type: CONSERVED_SITE
name: Hexapep_transf_CS
description: Hexapeptide transferase, conserved site

phrase: PTIIEDNCFIGARSEIVEGVVVEEGSVISMGVYI
type: REPEAT
name: Hexapep
description: Hexapeptide repeat
Protein sequence:
MTNLRKTHPLMKIINHAFIDLPAPSNISAWWNFGSLLGICLIIQMLTGLFLAMHYTSDTLTAFSSVAHICRDVNYGWLIRNMHANGASMFFMCLFIHVGRGIYYGSYMYKETWNIGVILLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIVTALVIVHLLFLHETGSNNPTGLNPDSDKIPFHPYYTIKDTLGFIMMILALLLLTMFSPDMLGDPDNFSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILILLIIPLLHTSKQRSLMFRPISQTLFWLLTSDLLILTWIGGQPVEQPFIIIGQIASITYFLIIIAFMPMAGLFENYMLKPKW

Annotated regions:
phrase: PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILILLIIPLLHTSKQRSLMFRPISQTLFWLLTSDLLILTWIGGQPVEQPFIIIGQIASITY
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: PLMKIINHAFIDLPAPSNISAWWNFGSLLGICLIIQMLTGLFLAMHYTSDTLTAFSSVAHICRDVNYGWLIRNMHANGASMFFMCLFIHVGRGIYYGSYMYKETWNIGVILLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIVTALVIVHLLFLHETGS
type: DOMAIN
name: Cytochrome_b_N_euk/bac
description: Cytochrome b/b6, N-terminal domain, eukaryotic/bacterial

phrase: GLNPDSDKIPFHPYYTIKDTLGFIMMILALLLLTMFSPDMLGDPDNFSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILILLIIPLLHTSKQRSLMFRPISQTLFWLLTSDLLILTWIGGQPVEQPFIIIGQIASITYFLIIIAFMPMAGLFENYMLKP
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: NPTGLNPDSDKIPFHPYYTIKDTLGFIMMILALLLLTMFSPDMLGDPDNFSPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALLASILILLIIPLLHTSKQRSLMFRPISQTLFWLLTSDLLILTWIGGQPVEQPFIIIGQI
type: DOMAIN
name: Cytochrome_b_C_euk/bac
description: Cytochrome b/b6, C-terminal domain, eukaryotic/bacterial

phrase: MTNLRKTHPLMKIINHAFIDLPAPSNISAWWNFGSLLGICLIIQMLTGLFLAMHYTSDTLTAFSSVAHICRDVNYGWLIRNMHANGASMFFMCLFIHVGRGIYYGSYMYKETWNIGVILLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIVTALVIVHLLFLHETGSNNP
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: IDLPAPSNISAWWNFGSLLGICLIIQMLTGLFLAMHYTSDTLTAFSSVAHICRDVNYGWLIRNMHANGASMFFMCLFIHVGRGIYYGSYMYKETWNIGVILLLTVMATAFVGYVLPWGQMSFWGATVITNLLSAIPYIGTTLVEWIWGGFSVDKATLTRFFAFHFILPFIVTALVIVHLLFLHET
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain
Protein sequence:
MSPEAIPDPESMLAEQAHDALDPDLRRSWQELADEVREHQFRYYIRDAPIITDAEFDQLLRRLQALEDEYPELRTPDSPTQLVGGAGFATDFTAAEHLERMLSLDNVFDLEELAAWAARIRTEIGADAQYLCELKIDGVALALVYRDGRLERAATRGDGRTGEDVTLNARTIEDIPERLSGTNEFPLPTVVEVRGEVFFRVADFEDLNAGLVAEGKPPFANPRNSAAGSLRQKNPAVTARRRLRMICHGLGHVESSGGSPFPTLHDAYRALKAWGLPVSDHTAQVTGLDAVTERIAYWGEHRHDVEHEIDGVVVKVDAVALQRRLGATSRAPRWAVAYKYPPEEAQTRLLDIRVNVGRTGRVTPFAYMEPVKVAGSTVGLATLHNASEVKRKGVLIGDTVVIRKAGDVIPEVLGPVVDLRDGSEREFVFPTHCPECGSELAPAKEGDADIRCPNTRSCPAQLRERVFHVAGRGAFDIEGLGYEAATALLQAGVIADEGDLFGLTADDLLRTELFTTKAGELSANGKRLLANLGKAKAQPLWRVLVALSIRHVGPTAARALATEFGSLEAIETASEEQLAGTEGVGPTIAAAVIDWFTVDWHRAIVDKWREAGVRMADERDASIERTLEGLSIVVTGSLAGFSRDEAKEAIIARGGKAAGSVSKKTAYVVAGDAPGSKYDKAIELGVPVLDEDGFRRLLAEGPERDAEDGEPG

Annotated regions:
phrase: TDFTAAEHLERMLSLDNVFDLEELAAWAARIRTEIGADAQYLCELKIDGVALALVYRDGRLERAATRGDGRTGEDVTLNARTIEDIPERLSGTNEFPLPTVVEVRGEVFFRVADFEDLNAGLVAEGKPPFANPRNSAAGSLRQKNPAVTARRRLRMICHGLGHVESSGGSPFPTLHDAYRALKAWGLPVSDHTAQVTGLDAVTERIAYWGEHRHDVEHEIDGVVVKVDAVALQRRLGATSRAPRWAVAYKYPP
type: DOMAIN
name: DNAligase_adenylation
description: NAD-dependent DNA ligase, adenylation

phrase: QTRLLDIRVNVGRTGRVTPFAYMEPVKVAGSTVGLATLHNASEVKRKGVLIGDTVVIRKAGDVIPEVLGPVVDLRDG
type: DOMAIN
name: NAD_DNA_ligase_OB
description: NAD-dependent DNA ligase, OB-fold

phrase: KIDGVALALVYRDGRLERAATRGDGRTGE
type: ACTIVE_SITE
name: DNA_ligase_AS
description: NAD-dependent DNA ligase, active site

phrase: SIERTLEGLSIVVTGSLAGFSRDEAKEAIIARGGKAAGSVSKKTAYVVAGDAPGSKYDKAIELGVPVLDEDGFRRLLAE
type: DOMAIN
name: BRCT_dom
description: BRCT domain

phrase: HCPECGSELAPAKEGDADIRCPNTRSCP
type: DOMAIN
name: Znf_DNAligase_C4
description: Zinc-finger, NAD-dependent DNA ligase C4-type

phrase: VGRTGRVTPFAYMEP
type: CONSERVED_SITE
name: DNA_ligase_CS
description: NAD-dependent DNA ligase, conserved site

phrase: ERTLEGLSIVVTGSLAGFSRDEAKEAIIARGGKAAGSVSKKTAYVVAGDAPGSKYDKAIELGVPVLDEDGFRRLLAE
type: DOMAIN
name: BRCT_dom
description: BRCT domain

phrase: RTLEGLSIVVTGSLAGFSRDEAKEAIIARGGKAAGSVSKKTAYVVAGDAPGSKYDKAIELGVPVLDEDGFRR
type: DOMAIN
name: BRCT_dom
description: BRCT domain

phrase: WQELADEVREHQFRYYIRDAPIITDAEFDQLLRRLQALEDEYPELRTPDSPTQLVGGAGFATDFTAAEHLERMLSLDNVFDLEELAAWAARIRTEIGADAQYLCELKIDGVALALVYRDGRLERAATRGDGRTGEDVTLNARTIEDIPERLSGTNEFPLPTVVEVRGEVFFRVADFEDLNAGLVAEGKPPFANPRNSAAGSLRQKNPAVTARRRLRMICHGLGHVESSGGSPFPTLHDAYRALKAWGLPVSDHTAQVTGLDAVTERIAYWGEHRHDVEHEIDGVVVKVDAVALQRRLGATSRAPRWAVAYKYP
type: DOMAIN
name: DNAligase_adenylation
description: NAD-dependent DNA ligase, adenylation

phrase: DLRRSWQELADEVREHQFRYYIRDAPIITDAEFDQLLRRLQALEDEYPELRTPDSPTQLVGGAGFATDFTAAEHLERMLSLDNVFDLEELAAWAARIRTEIGADAQYLCELKIDGVALALVYRDGRLERAATRGDGRTGEDVTLNARTIEDIPERLSGTNEFPLPTVVEVRGEVFFRVADFEDLNAGLVAEGKPPFANPRNSAAGSLRQKNPAVTARRRLRMICHGLGHVESSGGSPFPTLHDAYRALKAWGLPVSDHTAQVTGLDAVTERIAYWGEHRHDVEHEIDGVVVKVDAVALQRRLGATSRAPRWAVAYKYPPEEAQTRLLDIRVNVGRTGRVTPFAYMEPVKVAGSTVGLATLHNASEVKRKGVLIGDTVVIRKAGDVIPEVLGPVVDLRDGSEREFVFPTHCPECGSELAPAKEGDADIRCPNTRSCPAQLRERVFHVAGRG
type: DOMAIN
name: DNAligase_N
description: NAD-dependent DNA ligase, N-terminal

phrase: RVLVALSIRHVGPTAARALATEFGSLEAIETASEEQLAGTEGVGPTIAAAVIDWFTVDWHRAI
type: DOMAIN
name: DisA/LigA_HHH
description: DisA/LigA, helix-hairpin-helix motif
Protein sequence:
MSTQSNRNALVVAQLKGDFVAFLFVLWKALNLPVPTKCQIDMAKVLANGDNKKFILQAFRGIGKSFITCAFVVWSLWRDPQLKILIVSASKERADANSIFIKNIIDLLPFLSELKPRPGQRDSVISFDVGPANPDHSPSVKSVGITGQLTGSRADIIIADDVEIPSNSATMGAREKLWTLVQEFAALLKPLPSSRVIYLGTPQTEMTLYKELEDNRGYTTIIWPALYPRTREENLYYSQRLAPMLRAEYDENPEALAGTPTDPVRFDRDDLRERELEYGKAGFTLQFMLNPNLSDAEKYPLRLRDAIVAALDLEKAPMHYQWLPNRQNIIEDLPNVGLKGDDLHTYHDCSNNSGQYQQKILVIDPSGRGKDETGYAVLYTLNGYIYLMEAGGFRDGYSDKTLELLAKKAKQWGVQTVVYESNFGDGMFGKVFSPILLKHHNCAMEEIRARGMKEMRICDTLEPVMQTHRLVIRDEVIRADYQSARDVDGKHDVKYSLFYQMTRITREKGALAHDDRLDALALGIEYLRESMQLDSVKVEGEVLADFLEEHMMRPTVAATHIIEMSVGGVDVYSEDDEGYGTSFIEW

Annotated regions:
phrase: IDPSGRGKDETGYAVLYTLNGYIYLMEAGGFRDGYSDKTLELLAKKAKQWGVQTVVYESNFGDGMFGKVFSPILLKHHNCAMEEIRARGMKEMRICDTLEPVMQTHR
type: DOMAIN
name: Gp19_RNaseH-like
description: Terminase, large subunit, ribonuclease H-like domain
Protein sequence:
MEHYISLLVKSIFIENMALSFFLGMCTFLAVSKKVKTSFGLGVAVVVVLTIAVPVNNLVYNLVLKENALVEGVDLSFLNFITFIGVIAALVQILEMVLDRFFPPLYNALGIFLPLITVNCAIFGGVSFMVQRDYNFAESIVYGFGSGVGWMLAIVALAGIREKMKYSDVPPGLRGLGITFITVGLMALGFMSFSGVQL

Annotated regions:
Protein sequence:
MIERTFVGENVSETLIDEYFKTKLVRAGYSHIDLKKTPIGTRITVFAEKPGFVIGRKGKMVKELTETLSTEYAVNNPQIEVKQVESPDLDPAIVGHKIASSLERGMHFRKTAHSAIRRVMGSGAKGVAIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGVVGVTVKIMKPDVSLPDEITILSGEIKEVTEYSEASQE

Annotated regions:
phrase: IDEYFKTKLVRAGYSHIDLKKTPIGTRITVFAEKPGFVIGRKGKMVKELTETLSTEYAVNNPQIEVKQV
type: DOMAIN
name: KH_dom_type_2
description: K Homology domain, type 2

phrase: IDEYFKTKLVRAGYSHIDLKKTPIGTRITVFAEKPGFVIGRKGKMVKELTETLSTEYAVNNPQIEVKQVESP
type: DOMAIN
name: KH_dom_type_2
description: K Homology domain, type 2

phrase: TPIGTRITVFAEKPGFVIGRKGKMVKELTETLSTEYAVNNPQIEVKQVESPDLDPAIVGHKIASSL
type: DOMAIN
name: KH_dom
description: K Homology domain

phrase: IASSLERGMHFRKTAHSAIRRVMGSGAKGVAIIVSGKLSGERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGVVGVTVK
type: DOMAIN
name: Ribosomal_uS3_C
description: Small ribosomal subunit protein uS3, C-terminal

phrase: SRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGVV
type: CONSERVED_SITE
name: Ribosomal_uS3_CS
description: Small ribosomal subunit protein uS3, conserved site
Protein sequence:
MATAVGGGSDVEVGFAKLQGEDFEYYMQSYSIILGRNSKKATVDVDLSSLGGGMNISRNHARIFYDFTRRRFSLEVLGKNGCLVEGVLHLPGNPNVKLDSQDLLQIGDKEFYFLLPVRSILGGPLGPRHHVSGQTSVVPYHNYQSGPGSGSGKKGVRSRELYEYDDEDDDDDDDEEDDMRGSGKKTRRDGHEVVYASGEKKREGRSKVDREADDQQFLQLEEKDVVSSVATVLSDLCGPGEWMPMEKLHSVILKEYGNVWHHSRVRRYLSQEDWAIPEAKGKPWYGLLMLLRKYPEHFVINTRSKGRVTLEFVSLVTLLS

Annotated regions:
phrase: SIILGRNSKKATVDVDLSSLGGGMNISRNHARIFYDFTRRRFSLEVLGKNGCLVEGVL
type: DOMAIN
name: FHA_dom
description: Forkhead-associated (FHA) domain

phrase: IILGRNSKKATVDVDLSSLGGGMNISRNHARIFYDFTRRRFSLEVLGKNGCLVEGVL
type: DOMAIN
name: FHA_dom
description: Forkhead-associated (FHA) domain

phrase: ILGRNSKKATVDVDLSSLGGGMNISRNHARIFYDFTRRRFSLEVLGKNGCLVEGVLHLPGNPNVKLDSQDLLQI
type: DOMAIN
name: FHA_dom
description: Forkhead-associated (FHA) domain
Protein sequence:
MENATKLVDIRSLSLDQIKTALVEAGEQGFRAKQIYEWLWQKSATDFDQMSNLSKSLRENLKSRFSINAVQVRQSQISSDRTIKSSFTLYDGNVIEGVLIPAEDRMTACVSSQVGCSLTCKFCATGYMDRKRNLNADEIYDQVVLISKQAEEQYGHPLTNIVYMGMGEPLLNYSNMMKSVDRITSADGLNMAAKRITVSTAGIAKMIKKLGDDQVRFNLALSLHAANDTKRNEIMPINEQNSLKALAEALKYFYAKTKSPITFEYIVFDNFNDELEDARELARFCKHVPCKVNIIEYNPISLADFVNAEADKIEQFASYLRSQGITTNVRRSRGKDIDAACGQLAIKEKESDKVEA

Annotated regions:
phrase: DIRSLSLDQIKTALVEAGEQGFRAKQIYEWLWQKSATDFDQMSNLSKSLRENLKSRFS
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: SSQVGCSLTCKFCATGYMDRKRNLNADEIYDQVVLISKQAEEQYGHPLTNIVYMGMGEPLLNYSNMMKSVDRITSADGLNMAAKRITVSTAGIAKMIKKLGDDQVRFNLALSLHAANDTKRNEIMPINEQNSLKALAEALKYFYAKTKSPITFEYIVFDNFNDELEDARE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: AEDRMTACVSSQVGCSLTCKFCATGYMDRKRNLNADEIYDQVVLISKQAEEQYGHPLTNIVYMGMGEPLLNYSNMMKSVDRITSADGLNMAAKRITVSTAGIAKMIKKLGDDQVRFNLALSLHAANDTKRNEIMPINEQNSLKALAEALKYFYAKTKSPITFEYIVFDNFNDELEDARELARFCKHVPCKVNIIEYNPISLADFVNAEADKIEQFASYLRSQGITTNVRRSRGK
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TKLVDIRSLSLDQIKTALVEAGEQGFRAKQIYEWLWQKSATDFDQMSNLSKSLRENLKSRFSINAVQVRQSQISSDRTIKSSFTLYDGNVIEGVLIPAEDRMTACVSSQVGCSLTCKFCATGYMDRKRNLNADEIYDQVVLISKQAEEQYGHPLTNIVYMGMGEPLLNYSNMMKSVDRITSADGLNMAAKRITVSTAGIAKMIKKLGDDQVRFNLALSLHAANDTKRNEIMPINEQNSLKALAEALKYFYAKTKSPITFEYIVFDNFNDELEDARELARFCKHVPCKVNIIEYNPISLADFVNAEADKIEQFASYLRSQGITTNVRRSRGKDIDAACGQLAIKEKESD
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MALLPDKEKLLRNFLRCANWEEKYLYIIELGQRLPELRAEDRSPQNSIQGCQSQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMTPQDIVNFDVRPWFEKMALTQHLTPSRSQGLEAMIRAIRAKAAALS

Annotated regions:
phrase: PDKEKLLRNFLRCANWEEKYLYIIELGQRLPELRAEDRSPQNSIQGCQSQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMTPQDIVNFDVRPWFEKMALTQHLTPSRSQGLEAMIRAIRAKAAA
type: DOMAIN
name: Fe-S_metab-assoc_dom
description: Fe-S metabolism associated domain, SufE-like

phrase: RNFLRCANWEEKYLYIIELGQRLPELRAEDRSPQNSIQGCQSQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMTPQDIVNFDVRPWFEKMALTQHLTPSRSQGLEAMIRAIR
type: DOMAIN
name: Fe-S_metab-assoc_dom
description: Fe-S metabolism associated domain, SufE-like
Protein sequence:
MKKVVKVKDITIGEGMPKICIPILGETLEEIKEEAELLSTFDFDIVEWRADFFQFVEDMDCIKLAMEIIEENLGDKPMIFTLRSLKEGGKREVCEALYFEINRRVLETKNLDILDIELFHDKDEIESLINLAHKNGAKVIISNHDFQQTPSKDEILSRMNRAAQLGADIVKIAVMANDTEDVITVLDATRILKEDYLKIPLIAIAMGKKGMITRFAGEIFGSDITFATAKKTSAPGQLSVEDVKNIVQFIHKHTI

Annotated regions:
phrase: DIELFHDKDEIESLINLAHKNGAKVIISNH
type: ACTIVE_SITE
name: 3-dehydroquinate_DH_AS
description: 3-dehydroquinate dehydratase, active site