nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MADQLSNEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDQDGSGTIDFPEFLTLMARKMQDSDSEEEIKEAFRVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMSK

Annotated regions:
phrase: EIKEAFRVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMM
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: DKDGDGTITTKE
type: BINDING_SITE
name: EF_Hand_1_Ca_BS
description: EF-Hand 1, calcium-binding site

phrase: DKDGNGFISAAE
type: BINDING_SITE
name: EF_Hand_1_Ca_BS
description: EF-Hand 1, calcium-binding site

phrase: DVDGDGQINYEE
type: BINDING_SITE
name: EF_Hand_1_Ca_BS
description: EF-Hand 1, calcium-binding site

phrase: PTEAELQDMINEVDQDGSGTIDFPEFLTLMARKMQ
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: DSEEEIKEAFRVFDKDGNGFISAAELRHIMTNLGE
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: ELQDMINEVDQDGSGTIDFPEFLTLMAR
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: EIKEAFRVFDKDGNGFISAAELRHIMTN
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: EVDEMIREADVDGDGQINYEEFVKMMMS
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: EFKEAFSLFDKDGDGTITTKELGTVMRS
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDQDGSGTIDFPEFLTL
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: EEEIKEAFRVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMM
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: EQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQ
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDQDGSGTIDFPEFLTLM
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: LTDEEVDEMIREADVDGDGQINYEEFVKMMMS
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: DQDGSGTIDFPE
type: BINDING_SITE
name: EF_Hand_1_Ca_BS
description: EF-Hand 1, calcium-binding site
Protein sequence:
MAGEQTTTEYISHHLTNWTYGYLPGEGWKVAYNAEEASAMGFKAIHLDSMLWSIGLGIVFCAIFWMVARKVTSGVPGKTQAAVEMIVEFVDNNVRDSYSGTSKLIAPLALTIFVWIFLMNLMDLLPVDFIPMIAGQIGALMGHDPHHVYFKIVPTTDPNITLGMSFSVFILILFYSIKEKGLGGFVGELTLHPFSAKNPIVQIILIPINFILEFVTLIAKPISLGLRLFGNMYAGELIFILIALMPFWIQWALSVPWAIFHILIITLQAFVFMMLTIVYMSLASSTEH

Annotated regions:
phrase: SLGLRLFGN
type: ACTIVE_SITE
name: ATP_synth_F0_asu_AS
description: ATP synthase, F0 complex, subunit A, active site
Protein sequence:
MLRNMFKKTYTRIDAKYKPQEGNEGAEPNIPEGLWRKCNKCGQPIYVEDVVNNYYVCPKCSGYFRVHAYRRIEMIADEGSFEEWNQDMPVSNPLEFPGYEKKLQAAREKSRLNEAVVTGKCTVDGSPAVIGVCDARFIMSSMGHVVGEKITDAVERATKEQLPVVLFACSGGARMQEGIVSLMQMAKTSAALKRHHEAGQLFISVLTDPTTGGVTASFAMLGDIILAEPGALIGFAGPRVIEQTIGQKLPEGFQRSEFLLDHGFVDKIVERRDQKKVIGQILFMHQKHAMVPRAARPALAAAHAHSGKDEKAVSVDKKGKSGQDGGKTAWDTVLLSRKSDRPVATDYINAIFDEFIEFHGDRYFKDDGAIVGGIAMFHGMPVTVIGQQKGKNTKENIKRNFGMPSPDGYRKALRLMKQAETFNRPVVCFVDTPGAFCGLEAEERGQGEAIARNLFEMASLTVPVLSMVIGEGGSGGALAMAVANEVWMLENAIYSILSPEGFASILYKDSKKAPDAAKVMKVTAKDLQNLKLIERIIPEEQPASKENLFRLAELMDVAMEDFFKTYGAMSGEELANHRYDRFRRM

Annotated regions:
phrase: LWRKCNKCGQPIYVEDVVNNYYVCPKCSGYFRVHAYRRIEMIADEGSFEEWNQDMPVSNPLEFPGYEKKLQAAREKSRLNEAVVTGKCTVDGSPAVIGVCDARFIMSSMGHVVGEKITDAVERATKEQLPVVLFACSGGARMQEGIVSLMQMAKTSAALKRHHEAGQLFISVLTDPTTGGVTASFAMLGDIILAEPGALIGFAGPRVIEQTIGQKLPEGFQRSEFLLDHGFVDKIVERRDQKKVIGQILFMHQKHAMVPRAARPAL
type: DOMAIN
name: COA_CT_N
description: Acetyl-coenzyme A carboxyltransferase, N-terminal

phrase: SVDKKGKSGQDGGKTAWDTVLLSRKSDRPVATDYINAIFDEFIEFHGDRYFKDDGAIVGGIAMFHGMPVTVIGQQKGKNTKENIKRNFGMPSPDGYRKALRLMKQAETFNRPVVCFVDTPGAFCGLEAEERGQGEAIARNLFEMASLTVPVLSMVIGEGGSGGALAMAVANEVWMLENAIYSILSPEGFASILYKDSKKAPDAAKVMKVTAKDLQNLKLIERIIPEEQPASKENLFRLAELMDVAMEDFFK
type: DOMAIN
name: COA_CT_C
description: Acetyl-coenzyme A carboxyltransferase, C-terminal

phrase: WRKCNKCGQPIYVEDVVNNYYVCPK
type: DOMAIN
name: Znf-ACC
description: Acetyl-coA carboxylase zinc finger domain
Protein sequence:
MHHQWLLLAACFWVIFMFMVASKFITLTFKDPDGYSAKQEFVFLTTMPEAEKLRGEKHFPEVPKPTGKMLSDSRPDQPPVYLERLELIRNTCKEEALRNLSHTEVSKFVLDRIFVCDKHKILFCQTPKVGNTQWKKVLIVLNGAFSSIEEIPENVVHDHEKNGLPRLSSFSKIGIQKRLKTYFKFFIVRDPFERLISAFKDKFVHNPRFEPWYRHEIAPGIIRKYRKNRTETRGIQFEDFVRYLGDPNRRWLDLQFGDHIIHWVTYVELCAPCEIKYSVVGHHETLEADAPYILKEAGIDHLVSYPTIPPGITMYNRTKVEQYFLGISKRDIRRLYARFEGDFKLFGYQKPDFLLN

Annotated regions:
Protein sequence:
MNTLQSGVLVVDKPAGVTSHQVVGRVRRLMGTRKVGHAGTLDPMASGVLVVGVNRATRLLGHLSLHDKDYTATVRLGVGTVTDDAEGDVTVTTDASAIDDRAIHAAMVRQTGEIQQVPAAVSAIKVNGRRAYAKVRAGEDVVLRPRAVTVSRFEAIAIRRHGQVIDVDVEATCSSGTYVRALARDVGADLGVGGHLTALRRTRVGPFDLTAACVDIFAQDAVTPTPMTMAEAAALSFPVVHVTADQAAAIRVGRRLSFTVPAEVTAIIAETGELLALYRPDDEKDGQSRAICVLV

Annotated regions:
phrase: FPVVHVTADQAAAIRVGRRLSFTVPAEVTAIIAETGELLALYRPDD
type: DOMAIN
name: tRNA_psdUridine_synth_fam2_C
description: tRNA pseudouridine synthase II, TruB, subfamily 2, C-terminal

phrase: RALARDVGADLGVGGHLTALRRTRVGPFDL
type: DOMAIN
name: TruB_C
description: tRNA pseudouridylate synthase B, C-terminal

phrase: RRLMGTRKVGHAGTLDPMASGVLVVGVNRATRLLGHLSLHDKDYTATVRLGVGTVTDDAEGDVTVTTDASAIDDRAIHAAMVRQTGEIQQVPAAVSAIKVNGRRAYAKVRAGEDVVLRPRAVTVSRFEAIAIRRHGQVIDVDVEATCSSGTY
type: DOMAIN
name: PsdUridine_synth_N
description: Pseudouridine synthase II, N-terminal
Protein sequence:
MSDRNIRVEPVVGRAVEEQDVEIVERKGLGHPDSLCDGIAEHVSQALARAYIDRVGKVLHYNTDETQLVAGTAAPAFGGGEVVDPIYLLITGRATKEYEGTKIPAETIALRAAREYINETLPFLEFGTDVVVDVKLGEGSGDLQEVFGEDGKQVPMSNDTSFGVGHAPLTETERIVLEAERALNGDYSDDNPAVGQDIKVMGKREGDDIDVTVAVAMVDRYVDDLDGYEAAVAGVREFVADLATDYTDRNVSVHVNTADDYDEGAIYLTTTGTSAEQGDDGSVGRGNRSNGLITPNRSMSMEATSGKNPVNHIGKIYNLLSTEIARTVVDEVDGIREIRIRLLSQIGQPIDKPHVADANLVTEDGIEIADIEDEVEAIIDAELENVTSITERVIDGELTTF

Annotated regions:
Protein sequence:
MNQNKNNNNKNPKINLLIIGCGCIGLSTGIIALKSGNYKSVSIWAKDLPPNTTSNKAAALWYPFLCNPLDLVGKWSAETMQYYKDHIINDPKSGTITKKVNEIFRRPHPEDPEWKPYIKSFRRARKDELPDGYVDGYAIDDGFVMDTDMYMDYLVDQFKSLGGIIEQRHLVDIREAFVDHDVVVNCTGLGSRELFNDRTIYPGRGQIIVIKNSTDRSIMDEEDHIAYVIPRLTNTVLGGTNQEHDYNTNPTKKDTEEILKRVAMISPRFAKNRIEIQGVKVGLRPARHEIRLENEFFEGGSKLVVHNYGHGGSGFTVSWGCAIEAIKLVDQGLPKLLHFNKLISKL

Annotated regions:
phrase: LLIIGCGCIGLSTGIIALKSGNYKSVSIWAKDLPPNTTSNKAAALWYPFLCNPLDLVGKWSAETMQYYKDHIINDPKSGTITKKVNEIFRRPHPEDPEWKPYIKSFRRARKDELPDGYVDGYAIDDGFVMDTDMYMDYLVDQFKSLGGIIEQRHLVDIREAFVDHDVVVNCTGLGSRELFNDRTIYPGRGQIIVIKNSTDRSIMDEEDHIAYVIPRLTNTVLGGTNQEHDYNTNPTKKDTEEILKRVAMISPRFAKNRIEIQGVKVGLRPARHEIRLENEFFEGGSKLVVHNYGHGGSGFTVSWGCAI
type: DOMAIN
name: FAD-dep_OxRdtase
description: FAD dependent oxidoreductase

phrase: VVHNYGHGGSGFTVSWGC
type: CONSERVED_SITE
name: D-amino_acid_oxidase_CS
description: D-amino acid oxidase, conserved site
Protein sequence:
MAEVANNEQQEQAPQFNIQRIYTKDLSFETPNSPAVFQKEWNPEVKLDLDTRSNKLSDDVYEVVLSLTVTAKNGEETAFLCEVQQAGIFSIQGLTEQQLAHSLGAYCPNVLFPYARELVGSLVGRGTFPQLNLAPVNFDALFAQYVQQRQAAAAEAPAVEEANA

Annotated regions:
Protein sequence:
MDINRWSLQGMTALVTGGSKGIGYAIVEELVGFGARVHICDIDETLLNECLSGWHAKGFEVSGSICDVSSRPQRVQLMQTVSSLFGAKLNILINNVGKYILKPTLESTAEDFSSLMATNLESAYYISQLAHPLLKASGNGNIVFISSVTGVVSGTSTIYGVTKGALNQLARDLACEWASDNIRANSVAPWVTATSLVQKYLEDEIFAEAMFSRTPLGRACEPREVASLVTFLCLPAASYITGQTICIDGGFTVNGFSYKP

Annotated regions:
phrase: SSVTGVVSGTSTIYGVTKGALNQLARDL
type: CONSERVED_SITE
name: Sc_DH/Rdtase_CS
description: Short-chain dehydrogenase/reductase, conserved site
Protein sequence:
MSLSLWQQCLARLQDELPATEFSMWIRPLQAELSDNTLALYAPNRFVLDWVRDKYLNNINGLLNDFCGTDAPLLRFEVGSKPPQMAVLQPASQHASEAPSQAAVARPRPSRPSWDNAPVQPELSYRSNVNPKHNFDNFVEGKSNQLARAAARQVADNPGGAYNPLFLYGGTGLGKTHLLHAVGNGIMARKANAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEINGVEDRLKSRFGWGLTVAIEPPELETRVAILMKKADENAIRLPGEVAFFIAKRLRSNVRELEGALNRVIANANFTGRAITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKVADLLSKRRSRSVARPRQMAMALSKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQLREESHDIKEDFSNLIRTLSS

Annotated regions:
phrase: IGDAFGGRDHTTVLHACRK
type: CONSERVED_SITE
name: Chromosome_initiator_DnaA_CS
description: Chromosomal replication control, initiator DnaA, conserved site

phrase: TIDNIQKTVAEYYKIKVADLLSKRRSRSVARPRQMAMALSKELTNHSLPEIGDAFGGRDHTTVLHACRK
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: SLWQQCLARLQDELPATEFSMWIRPLQAELSDNTLALYAPNRFVLDWVRDKYLNNINGLL
type: DOMAIN
name: DnaA_N_dom
description: DnaA N-terminal domain

phrase: IDNIQKTVAEYYKIKVADLLSKRRSRSVARPRQMAMALSKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQLREESHDIKEDFSNLIRT
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: AYNPLFLYGGTGLGKTHLLHAVGNGIMARKANAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEINGVEDRLKSRFGWGLTVAIEPPELETRVAILMKKADENAIRLPGEVAFFIAKRLRSNVRELEGALNRVIANANFTGRAITIDFVREALRD
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: NPKHNFDNFVEGKSNQLARAAARQVADNPGGAYNPLFLYGGTGLGKTHLLHAVGNGIMARKANAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEINGVEDRLKSRFGWGLT
type: DOMAIN
name: DnaA_dom
description: Chromosomal replication initiator protein DnaA, ATPAse domain

phrase: IDNIQKTVAEYYKIKVADLLSKRRSRSVARPRQMAMALSKELTNHSLPEIGDAFGGRDHTTVLHACRK
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal
Protein sequence:
MSQNVVILGTQWGDEGKGKIVDLLTDKATMVVRYQGGHNAGHTLVIDGEKTVLHLIPSGILRKNVQCVIGNGVVLSPEALMEEMAMLEARHVPVADRLRISKACPLILPFHVALDQARERARGKEAIGTTGRGIGPAYEDKVARRGLRVGDLFDMKRFGEKLKELVDYHNFSLVEYYKADAIDFDTVLKQCEEFAEVLKPMVIDVPALLDKARKNGESIMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGAGFGPRYIDYVLGIVKAYTTRVGSGPFPTELDCEVGQHLGEKGHEFGATTGRKRRTGWIDAVAMRRAVQINSISGFCLTKLDVLDGLEELKICIGYQLSDGSVTEHPPLSAEDYEVVEPIYETMPGWQQSTVGITEHKELPPEALAYIARIEALTGVPVDIISTGPDRKETIVLRHPFGQ

Annotated regions:
phrase: GIGPAYEDKVA
type: ACTIVE_SITE
name: Adenylosuccin_syn_Lys_AS
description: Adenylosuccinate synthase, active site

phrase: QWGDEGK
type: BINDING_SITE
name: Adenylosuccin_syn_GTP-bd
description: Adenylosuccinate synthase, GTP-binding site
Protein sequence:
MSAPKLDRRQILKLEAAAMAALAGGMPVAAKAANLVTERNESELKWDKAPCRFCGTGCSVMVATKDNRVVATHGDIKSEVNRGLNCVKGYFLSKIMYGHDRLTRPMLRKSNGKFDKNGEFTAVSWDEAFDVMAEKFKAALKKRGPSGVGMFGSGQWTIWEGYAASKLFKAGFRSNNIDPNARHCMASAAVGFMRTFGIDEPMGCYDDIEAADAFVLWGSNMAEMHPILWTRVADRRLSAPHVRVAVLSTFEHRSFDLADIGLVFKPQADLYLLNAIANHIVKTGRVNKDFVDKHTLFKRGQTDIGYGLRPEHPLEKKATGRAKAGDATDMTYDEYVKFLSDYTLAKAAEMAGVPLNRLEALAELYADPKVKVMSLWTMGFNQHTRGVWCNNLVYNLHLLTGKISEPGNSPFSLTGQPSACGTAREVGTFSHRLPADMVVTNKEHRDKTEHIWKLPEGTIPDKPGYHAVLQNRMLKDGLLNAYWIQVNNNLQAAANANEETYLGYRNPENFIVVSDAYPSVTALAADLILPAAMWVEKEGAYGNAERRTHAWHQLVSAPGEAKSDLWQLMEFSKRFKVEEVWPEELIAKKPEYRGKTLFDVLYRNGEVDKFPVSDIESGYANDESKAFGFYVHKGLFEEYASFGRGHGHDLAPFDTYHQVRGLRWPVVNGQETRWRFREGLDPYVRQGAGVQFYGFPDGRARIFALPYEPAAEEPDKDYPLWLSTGRVLEHWHSGTMTRRVPELYKAFPEAVCFMHPDDAAELKLRRGD

Annotated regions:
phrase: KWDKAPCRFCGTGCSVMVATKDNRVVATHGDIKSEVNRGLNCVKGYFLSKIMY
type: DOMAIN
name: Mopterin_OxRdtase_4Fe-4S_dom
description: Molybdopterin oxidoreductase, 4Fe-4S domain

phrase: MSAPKLDRRQILKLEAAAMAALAGGMPVAAK
type: CONSERVED_SITE
name: TAT_signal
description: Twin-arginine translocation pathway, signal sequence

phrase: LKWDKAPCRFCGTGCSVMVATKDNRVVATHGDIKSEVNRGLNCVKGYFLSKIMY
type: DOMAIN
name: Mopterin_OxRdtase_4Fe-4S_dom
description: Molybdopterin oxidoreductase, 4Fe-4S domain

phrase: APCRFCGTGCSVMVATKD
type: BINDING_SITE
name: MopterinOxRdtase_cofactor_BS
description: Molybdopterin oxidoreductase, molybdopterin cofactor binding site

phrase: LKWDKAPCRFCGTGCSVMVATKDNRVVATHGDIKSEVNRGLNCVKGYFLSKIMYGH
type: DOMAIN
name: Mopterin_OxRdtase_4Fe-4S_dom
description: Molybdopterin oxidoreductase, 4Fe-4S domain

phrase: LWLSTGRVLEHWHSGTMTRRVPELYKAFPEAVCFMHPDDAAELKLRRG
type: DOMAIN
name: MoPterin_dinucl-bd_dom
description: Molybdopterin dinucleotide-binding domain

phrase: RLTRPMLRKSNGKFDKNGEFTAVSWDEAFDVMAEKFKAALKKRGPSGVGMFGSGQWTIWEGYAASKLFKAGFRSNNIDPNARHCMASAAVGFMRTFGIDEPMGCYDDIEAADAFVLWGSNMAEMHPILWTRVADRRLSAPHVRVAVLSTFEHRSFDLADIGLVFKPQADLYLLNAIANHIVKTGRVNKDFVDKHTLFKRGQTDIGYGLRPEHPLEKKATGRAKAGDATDMTYDEYVKFLSDYTLAKAAEMAGVPLNRLEALAELYADPKVKVMSLWTMGFNQHTRGVWCNNLVYNLHLLTGKISEPGNSPFSLTGQPSACGTAREVGTFSHRLPADMVVTNKEHRDKTEHIWKLPEGTIPDKPGYHAVLQNRMLKDGLLNAYWIQVNNNLQAAANANEETYLGYRNPENFIVVSDAYPSVTALAADLILPAAMWVEKEGAYGNAERRTHAWHQLVSAPGEAKSDLWQLMEFSK
type: DOMAIN
name: Mopterin_OxRdtase
description: Molybdopterin oxidoreductase
Protein sequence:
MWIINWFYDVLSSLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTLHPTSEELAIGNVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAKDHDRFPEAKAELDALLSMEELAKVPFVILGNKIDHPEAISEEELRHQLGLYQTTGKGKVPLEGIRPIEVFMCSVVMRQGYGEGIRWLSQYV

Annotated regions:
phrase: KHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTLHPTSEELAIGNVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAKDHDRFPEAKAELDALLSMEELAKVPFVILGNKIDHPEAISEE
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain
Protein sequence:
MSQLLAIHMNEKDWSEWFVANGDKSFRGRQIMDWMYIRHNFDPLEFSNIPKILREKLNSEFNWSLPKIDTLLPSEDGSEKILLKLQDGLFAECVLMPSENRVTLCVSSQVGCKMACTFCQTGKMGLTRNLTMGEILTQVVIANKRLIERNILNRSVTNIVFMGMGEPLDNYENVVNACKALIDPKLFGLSKHKVTVSTSGLVPEILRLGNDVPVALAISLHTADDPQRSGMMPVNKKYPLDELKKALLEYPVQTRHGITFEYVMIQGVNDSILHAKKLVKFLHGMKAKVNLIPMNPHPGAVNMVATDFDQMRVFQKYLTDRSIPAPVRYSRGQDVSAACGQLAAKRKDEINLPPRTVALARRREYLSSKVKIN

Annotated regions:
phrase: SSQVGCKMACTFCQTGKMGLTRNLTMGEILTQVVIANKRLIERNILNRSVTNIVFMGMGEPLDNYENVVNACKALIDPKLFGLSKHKVTVSTSGLVPEILRLGNDVPVALAISLHTADDPQRSGMMPVNKKYPLDELKKALLEYPVQTRHGITFEYVMIQGVND
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: MNEKDWSEWFVANGDKSFRGRQIMDWMYIRHNFDPLEFSNIPKILREKLNS
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: SENRVTLCVSSQVGCKMACTFCQTGKMGLTRNLTMGEILTQVVIANKRLIERNILNRSVTNIVFMGMGEPLDNYENVVNACKALIDPKLFGLSKHKVTVSTSGLVPEILRLGNDVPVALAISLHTADDPQRSGMMPVNKKYPLDELKKALLEYPVQTRHGITFEYVMIQGVNDSILHAKKLVKFLHGMKAKVNLIPMNPHPGAVNMVATDFDQMRVFQKYLTDRSIPAPVRYSRGQ
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MATVSLPCTAVLIDLDGTLVDCAPDIVEAANRMLADLGSPALPFGTVAGFIGRGVPNLVRRVLETAQLAPRVDATDAVAMFHRHYADTNGRLGSVFPGVEAGLAALRRQGYRLACVTNKPRALAVPLLALTGLSQYLEVLVAGDSIAQMKPDPEPLRHACNLLDVDAAQGVLVGDSAVDVAAARAAGIPVCLVRYGYAGPGGPAALGADALVDSLEALPALLTPARLAPAA

Annotated regions:
Protein sequence:
MSAQAKPRSEMTAEELAAKEDEEFNVGPLSILTNSVKNNHQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTEVPKTGKGKKKAKSVAKDRFISKMFLRGDSVILVVKNPLAQAE

Annotated regions:
phrase: KNNHQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTEVPKTGKGKKKAKSVAKDRFISKMFLRGDSVILV
type: DOMAIN
name: Sm_dom_euk/arc
description: Sm domain, eukaryotic/archaea-type

phrase: LSILTNSVKNNHQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTEVPKTGKGKKKAKSVAKDRFISKMFLRGDSVILVVKNPL
type: DOMAIN
name: Sm
description: Sm domain

phrase: LTNSVKNNHQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTEVPKTGKGKKKAKSVAKDRFISKMFLRGDSVILVV
type: DOMAIN
name: Sm_dom_euk/arc
description: Sm domain, eukaryotic/archaea-type
Protein sequence:
MAAGSSGGGGRPCSKSSADSGFLGLRPTSVDPALRRRRRGPRNKKRGWRRLAQEPLGLEVDQFLEDVRLQERTSGGLVSEAPDEKLFFVDTGSKEKELKKKRTKFQKKSLLLKKPLRVDLILENTSKIPAPKDVLAHQVPNAKKLRRKQQLWEKLAKQGELPREVRRAQARLLNPPVTKAKPAPQDTVERPFYDLWALDNPLDRPLVGQDEFFLEQTKKKGVKRPPHLHIRPSQAPAVEVTPAGASYNPSFEDHQTLLSVAHEVELRRQKEAEKLERQLALPAGEPAATQRAQQAAVRAARLRHQELFRLRGIKAQVARRLAELALRRRWRQARRLAEADKPRRLGRLKYQAPDIDVQLSSELSDSLRTLKPEGNILRDRFKSFQRRNMIEPRERAKFKRKYKVKLVEKRAFREIQL

Annotated regions:
Protein sequence:
MSLNFLDFEQPIAELEAKIDSLTAVSRQDEKLDINIDEEVHRLREKSVELTRKIFADLGAWQVAQLARHPQRPYTLDYVRLAFDEFDELAGDRAYADDKAIVGGIARLDGRPVMIIGHQKGRETKEKIRRNFGMPAPEGYRKALRLMEMAERFNMPIITFIDTPGAYPGVGAEERGQSEAIARNLREMSRLSVPVICTVIGEGGSGGALAIGVGDKVNMLQYSTYSVISPEGCASILWKSADKAPLAAEAMGIIAPRLKELKLIDSIIQEPLGGAHRNPEAMAASLKAQLLADLADLDVLSKDDLKNRRYQRLMSYGYA

Annotated regions:
phrase: NIDEEVHRLREKSVELTRKIFADLGAWQVAQLARHPQRPYTLDYVRLAFDEFDELAGDRAYADDKAIVGGIARLDGRPVMIIGHQKGRETKEKIRRNFGMPAPEGYRKALRLMEMAERFNMPIITFIDTPGAYPGVGAEERGQSEAIARNLREMSRLSVPVICTVIGEGGSGGALAIGVGDKVNMLQYSTYSVISPEGCASILWKSADKAPLAAEAMGIIAPRLKELKLIDSIIQEPLGGAHRNPEAMAASLKAQLLADLA
type: DOMAIN
name: COA_CT_C
description: Acetyl-coenzyme A carboxyltransferase, C-terminal
Protein sequence:
MLGFITRPPHQLLCTGYRLLRTPVLCTQPRPRTMSSSTSWELPLVAVCQVTSTPNKQENFKTCAELVQEAARLGACLAFLPEAFDFIARNPAETLLLSEPLNGDLLGQYSQLARECGIWLSLGGFHERGQDWEQNQKIYNCHVLLNSKGSVVASYRKTHLCDVEIPGQGPMRESNYTKPGGTLEPPVKTPAGKVGLAICYDMRFPELSLKLAQAGAEILTYPSAFGSVTGPAHWEVLLRARAIESQCYVIAAAQCGRHHETRASYGHSMVVDPWGTVVARCSEGPGLCLARIDLHFLQQMRQHLPVFQHRRPDLYGSLGHPLS

Annotated regions:
phrase: GLAICYDMRFPELSLKLAQA
type: CONSERVED_SITE
name: UPF0012_CS
description: Uncharacterised protein family UPF0012, conserved site

phrase: LVAVCQVTSTPNKQENFKTCAELVQEAARLGACLAFLPEAFDFIARNPAETLLLSEPLNGDLLGQYSQLARECGIWLSLGGFHERGQDWEQNQKIYNCHVLLNSKGSVVASYRKTHLCDVEIPGQGPMRESNYTKPGGTLEPPVKTPAGKVGLAICYDMRFPELSLKLAQAGAEILTYPSAFGSVTGPAHWEVLLRARAIESQCYVIAAAQCGRHHETRASYGHSMVVDPWGTVVARCSEGPGLCLARIDLHFLQQMRQHLPVFQHR
type: DOMAIN
name: Nit1/2_C-N_Hydrolase
description: Nit1/2, carbon-nitrogen hydrolase domain

phrase: LVAVCQVTSTPNKQENFKTCAELVQEAARLGACLAFLPEAFDFIARNPAETLLLSEPLNGDLLGQYSQLARECGIWLSLGGFHERGQDWEQNQKIYNCHVLLNSKGSVVASYRKTHLCDVEIPGQGPMRESNYTKPGGTLEPPVKTPAGKVGLAICYDMRFPELSLKLAQAGAEILTYPSAFGSVTGPAHWEVLLRARAIESQCYVIAAAQCGRHHETRASYGHSMVVDPWGTVVARCSEGPGLCLARIDLHFLQQMR
type: DOMAIN
name: C-N_Hydrolase
description: Carbon-nitrogen hydrolase

phrase: LPLVAVCQVTSTPNKQENFKTCAELVQEAARLGACLAFLPEAFDFIARNPAETLLLSEPLNGDLLGQYSQLARECGIWLSLGGFHERGQDWEQNQKIYNCHVLLNSKGSVVASYRKTHLCDVEIPGQGPMRESNYTKPGGTLEPPVKTPAGKVGLAICYDMRFPELSLKLAQAGAEILTYPSAFGSVTGPAHWEVLLRARAIESQCYVIAAAQCGRHHETRASYGHSMVVDPWGTVVARCSEGPGLCLARID
type: DOMAIN
name: C-N_Hydrolase
description: Carbon-nitrogen hydrolase
Protein sequence:
MLMQSIYLSKIREQNPLIHNITNIVAANFSANGLLALGASPLMSANVEEMQEVPKISQALVINIGTLIGKDREAMLQAGKTANEVGIPVVLDPVGVGATSYRRETIRELLAEVKFALIRGNAGELAAIAGETWQAKGVDAGQGEVDLKAVAEKVAQRYGCTVLISGAVDIVSDGTQTATVHNGTSLFPKVTASGCLLSAVCAAFLAVSEGNYFSATLEACVAYTIAGECAAQGLTTQVGQFQIRLLDELAALSPETIGQRGRINE

Annotated regions:
Protein sequence:
MGARKKRAPRRGSLGFSPRKRASRLVPRVKRWPEVDIGKPVPLAFLGYRAGMTHVFMVDDRPGRPTSGKEIFVPVTIVETPPMFVAAVRLYGYDPNRGRYSLGEAWAQPPPELELQRRISTLGSFDTDKMLKSLEERLDKAEDVRLIAASQPKLAGGLSKKKPDLLEIKVGGVSDVTKLFDYAKDVLGNLIAVNDVFEEGQLVDVIAVTKGKGFQGVIKRWGVKELPRWHKHRKGSRRIGARSHGRSTFWETPQAGQTGFHRRTEYNKRILMIDDDGYKVTPAGGFLRYGVVRSTFVMLSGSIPGTPKRPIVMRWAIRPPEWYLKLGVRKPEITYISLASKQGV

Annotated regions:
phrase: FEEGQLVDVIAVTKGKGFQGVIK
type: CONSERVED_SITE
name: Ribosomal_uL3_CS
description: Large ribosomal subunit protein uL3, conserved site
Protein sequence:
MDEESVSNGSLFSKFEGEETMGKVLLFSIVSIFTGILFLLLLHLYARLFWWRVEQHFNLNLIQSDDPGSTVIGRNPRRRRFVFAQSQEDPLHNAGLDSKILQSIHVVVFKCTDFKDGLECAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTVGSVEDTTHGGSEGLPQNQNFESGHSTNQHNPSQDQSFVHEFSTEPLSFPTNVLVWGDQNQVRSAGLVVTEESPSGNFAASYNDHQQESSSTRSQEVTAVVVDIPDNSSENLSERIDEEEPKSPMFTRLRLLKNVLSREKTNNNNV

Annotated regions:
phrase: CAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLC
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: ECAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLC
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: CAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPL
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type
Protein sequence:
MSINVFWFLPTHGDGHYLGSSEGARAVDYSYLQQIAQAADRLGFGGVLIPTGRSCEDSWLVAASLIPVTQRLKFLVALRPGIISPTLAARQAATLDRLSNGRALFNLVTGGDPEELAAEGLHLNHTERYEASAEFTHVWRKVLEGETVDFAGKHIQVKGAKLLFPPVQHPRPPLYFGGSSAAAQDLAAEQVELYLTWGEPPEQVKEKIEEVRAKAAAKGRTVRFGIRLHVIVRETTEEAWRAANRLIANLDDKTIADAQQAFAGFDSVGQQRMAALHGGKKDNLEISPNLWAGVGLVRGGAGTALVGDGPTVAQRIQEYADLGIDTFVFSGYPHLEEAYRVSELLFPHLDLATTELPTQRPATQPQGEVVANIYVPQKVSQS

Annotated regions:
phrase: NVFWFLPTHGDGHYLGSSEGARAVDYSYLQQIAQAADRLGFGGVLIPTGRSCEDSWLVAASLIPVTQRLKFLVALRPGIISPTLAARQAATLDRLSNGRALFNLVTGGDPEELAAEGLHLNHTERYEASAEFTHVWRKVLEGETVDFAGKHIQVKGAKLLFPPVQHPRPPLYFGGSSAAAQDLAAEQVELYLTWGEPPEQVKEKIEEVRAKAAAKGRTVRFGIRLHVIVRETTEEAWRAANRLIANLDDKTIADAQQAFAGFDSVGQQRMAALHGGKKDNLEISPNLWAGVGLVRGGAGTALVGDGPTVAQRIQEYADLGI
type: DOMAIN
name: Luciferase-like_dom
description: Luciferase-like domain
Protein sequence:
MNNQCKTIAHVLRVNNGQELHVWETPPKENVPFKNNTILIASGFARRMDHFAGLAEYLSENGFHVFRYDSLHHVGLSSGSIDEFTMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISDLELSFLITAVGVVNLRDTLEKALGFDYLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANTSVPLIAFTANNDDWVKQEEVYDMLAHIRTGHCKLYSLLGSSHDLGENLVVLRNFYQSVTKAAIAMDGGSLEIDVDFIEPDFEQLTIATVNERRLKAEIESRTPEMA

Annotated regions:
Protein sequence:
MPSLKDLKNRIASVKATQKITKAMKMVAAAKLRRAQEAAEAARPYSQRMAAVLANIAQAVGADDSAPRLMTGTGRDDTHLVIVCTAERGLCGGFNSQIARFARDHVRKLLAQGKTVKIICVGKKGFDMLRRDFASLIIDRVDLREVKKIGFENADRIGHKVIELFDKGEFDVCTLFYSEFKSVISQIPTAQQLIPASAGEVAAAEGEGASAIYEYEPEAGAILSDLIPRNISVQIFRALLENVAGEMGAKMSAMDNATRNAGEMIDKLTLSYNRQRQAQITKELIEIISGAEAL

Annotated regions:
phrase: ITKELIEIISGAE
type: CONSERVED_SITE
name: ATP_synth_F1_gsu_CS
description: ATP synthase, F1 complex, gamma subunit conserved site
Protein sequence:
MSVSPVQPDPSVIGGVPKAPFVLKPNLARLFNDRASRFEALAQGSHLAPYLNFLAGITRIQSELVSALPPPEPVPADRVERARANAMPPIDRAAMGGSPDCREVLQQFFEKAEALEKPAAAAEALAQVRTADEEMLTWMIGNVMADDLPVESLAHHLYVAAAMQIQAARLAAGLDGSRLVPIRVGVCPACGGRPVASMVIGFHGAEGARYASCSCCATMWNEVRVKCLACGSTKGIGYQAVETGDEEATVKAEVCDTCNSWMKILYQNKNPSLDVVADDVASLGLDLLMKDTEYKRAGFDPFLMGY

Annotated regions:
phrase: VKCLACGSTKGIGYQAVETGDEEATVKAEVCDTCNSWMKILYQNKNPSLDVVADDVASLGLDLLMKDTEYKRAGFDPF
type: DOMAIN
name: FdhE_C
description: FdhE, C-terminal domain

phrase: VCPACGGRPVASMVIGFHGAEGARYASCSCCATMWNEV
type: DOMAIN
name: FdhE_central
description: FdhE, central domain

phrase: APFVLKPNLARLFNDRASRFEALAQGSHLAPYLNFLAGITRIQSELVSALPPPEPVPADRVERARANAMPPIDRAAMGGSPDCREVLQQFFEKAEALEKPAAAAEALAQVRTADEEMLTWMIGNVMADDLPVESLAHHLYVAAAMQIQAARLAAGLDGSRLVP
type: DOMAIN
name: FdhE_N
description: FdhE, N-terminal domain
Protein sequence:
MFETTLHDGVLELAAPGARWLSTGWNGGDTRADRAYSITVPDDWAPDSTHEYVTDRLAAAGFAPRDDAPVLLTGVAQEHARIARCGPVAVAATAGLSNPAALPMDPDGGTLPDAKRAPPGTVNLVAATTRALDDAALSNLVAVAAEAKAATLLATAGFPGTTSDAVVVACDPGGETAPYSGSATPVGAATRACVREAVRASLDSRDAASPDSVESAAHGTTTDVQAAVFRP

Annotated regions:
Protein sequence:
MTAPEQTYRNKKQRKQQHKLRRPGYAIAKYVRMSPRKVRLVVDVIRGKSVAEAEDLLRFIPRAASEPVAKVLKSAKSNAINNDEMLEDRLVVAAAYVDAGPTLKRLLPRARGSANIIKKRTSHITIIVAERESLSRKGS

Annotated regions:
phrase: KRLLPRARGSANIIKKRTSHITII
type: CONSERVED_SITE
name: Ribosomal_uL22_CS
description: Large ribosomal subunit protein uL22, conserved site
Protein sequence:
MKLLFATNNAGKLKEVKGILGPLGFEVVGLREAGLCVEVVEDGATFTENALKKARELNKLSHLPVLADDTGLSVDSLGGFPGVRSARYAGEKATDADNNEKLLEELKGVPAEKRTAAFICHMVFIGEGGTELHAEGVLKGKILEEKRGSGGFGYDPLFVPEGETKTLADMELSEKNLISHRRKALDQLAKSLRTRSKFKANR

Annotated regions:
Protein sequence:
MSAAIVNAVKQCGYFNQGQCLSCRHIQQPLAQQVAVKTQTLQQLLAPFIPANSAELFLPPITGDDSGFRNKAKMVVLGAAHEPVLGIVGPSGEAVDLCDCLLYPADMQALLHRLTRFVQQAGLPPYRVDKAKGELKFILLTRSQVRGEYLLRFVLRSHNGIERIERELPALLAEYPQIKVVSVNIQPIHMAILEGDEEIFLTENTRLEERFNHVPLFIRPKSFFQTNPQVAAQLYQTAREWVAEFSPRSLWDLFCGVGGFGLHCASNDITLTGIEIEAEAIACAQMSAQMMGLENVQFMALDSTDFAKGKSAADKPDLIIVNPPRRGIGEALCQSLSEFAPKAILYSSCNPKTLAKDLEHIQGYHLTKVQLFDLFPHSDHFEVLAMLVKD

Annotated regions:
phrase: FDLFPHSDHF
type: CONSERVED_SITE
name: MeTrfase_TrmA_CS
description: RNA methyltransferase TrmA, conserved site

phrase: NPPRRGIGEALCQSLSEFAPKAILYSSCNPK
type: ACTIVE_SITE
name: MeTrfase_TrmA_AS
description: RNA methyltransferase TrmA, active site
Protein sequence:
MASTTGTEATPSRISLSQDHLGILHDVKVNTASIEIANSLLQKNHEEWHMFFRDRAGHNHISHSILTCLALGGSPEDIQRAYDDGLEIQRPMPPLDDALVARLGDDNVMYESLGSISQYRSFLAYFQHHMEEHGWKATVTKYLFSHTKLSEKMLARMYEGAYHPVIHLGLGFEFQQPAIVAEALAQAAAHDDSNLYTYFIACEEESEIAYPLQQAKTLLQIMADASSSKTIRNAPHWEDYGNKMRDGVLGRACRETANVASKFVIRKTPESLRRRTAEMIDTCAYVAASSQRSGRKRKIDFFYMHMVTSSLFFSVIGEQDWIPLNDRIRMVEWKARLDVAWYVVCGCADIQQLALTAYNDPVTDGMGWEELYAAVVKEHDDGHVSKMIRALKNGQEAARPFENGPYRNAFPLHGDMWLKAARMTLGTTTGCDEDTKFVMFTGFDIPWETRPDLQ

Annotated regions:
Protein sequence:
MPAIEVGRIAVVIAGRRAGQKVVVADIIDKNFVLVTGAGLNKVKRRRMNVKHLEPLPERVNIERGASDEEIKKALEEAGISLE

Annotated regions:
phrase: IEVGRIAVVIAGRRAGQKVVVADIIDKNFVLVTGAGLNKVKRRRMNVKHLEPLPERVNIERGASDEEIKKALEEA
type: DOMAIN
name: Ribosomal_eL14_KOW
description: Large ribosomal subunit protein eL14, KOW motif
Protein sequence:
MIALIQRVTRASVTVEDEVTGEIGPGLLVLLGVEKDDDEQKANRLCERVLGYRIFSDADGKMNLNVQQAGGSVLVVSQFTLAADTDRGMRPGFSKGAAPDRAEALYDYFVERCRQQEMNTQTGRFAADMQVSLVNDGPVTFWLQV

Annotated regions:
Protein sequence:
MAKQQTIASPITFKGVGLHTGAETTMTLYPAEPNKGICFVRKDLPSPVHIPALANFVNSTDRGTALRKENIVIYTVEHILAALTGCEIDNCEIHLDGPEPPIMDGSAWPFVEKILETGVITQDADVQYYVITEVITYSDPKHNIEIMAVPADEYRVTVMVDYNTEVLGTQNAEILSIKDFVPQIAKARTFSFLHELEYLLDNGLIKGGDLNNAIVYVDKKPCEETMRKLQKAFKKEKVSVRENGILDNLELYYPNEAARHKLLDVVGDLTLCGKRIKGHIIAKKPGHRANTEFAKMLFTRIKQEKSQAPKYDPNQPPVKDVVEIMKMLPHRPPFLLVDKIIYIDDQSVIGVKSVSMNEPFFVGHFPGAPVMPGVLQVEAMAQVGGIFALSTVPDPHNYLTYFLRLDEVKFKQKVVPGDTLIFRLELISPIRRGIVQMRGEAFVGSKLVMEAQLTAQIVKERND

Annotated regions: