nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTNIRKSHPLLKIINNAFIDLPTPSNISSWWNFGSLLGICLTLQILTGLFLAMHYTSDTATAFNSITHICRDVNYGWILRYAHANGASMFFICLYLHVGRGLYYGSYVYTETWNIGVILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFLLPFIISAMVTVHLLFLHETGSNNPTGIPSNTDMIPFHPYYTIKDILGLLLMITLLLTLVLFSPDMLGDPDNYLPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVMALVISILILIIIPLLHTSKQRSMAFRPLSQCLFWLLVADLLTLTWIGGQPVEXPXXXXGQMASILYFSIIIILMPLTSLVENHLLKW

Annotated regions:
phrase: PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVMALVISILILIIIPLLHTSKQRSMAFRPLSQCLFWLLVADLLTLTWIGGQPVEXPXXXXGQMASILY
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: IDLPTPSNISSWWNFGSLLGICLTLQILTGLFLAMHYTSDTATAFNSITHICRDVNYGWILRYAHANGASMFFICLYLHVGRGLYYGSYVYTETWNIGVILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFLLPFIISAMVTVHLLFLHET
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: GIPSNTDMIPFHPYYTIKDILGLLLMITLLLTLVLFSPDMLGDPDNYLPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVMALVISILILIIIPLLHTSKQRSMAFRPLSQCLFWLLVADLLTLTWIGGQPVEXPXXXXGQMASILYFSIIIILMPLTSLVENHLLK
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: MTNIRKSHPLLKIINNAFIDLPTPSNISSWWNFGSLLGICLTLQILTGLFLAMHYTSDTATAFNSITHICRDVNYGWILRYAHANGASMFFICLYLHVGRGLYYGSYVYTETWNIGVILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFLLPFIISAMVTVHLLFLHETGSNNP
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: PLLKIINNAFIDLPTPSNISSWWNFGSLLGICLTLQILTGLFLAMHYTSDTATAFNSITHICRDVNYGWILRYAHANGASMFFICLYLHVGRGLYYGSYVYTETWNIGVILLFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFLLPFIISAMVTVHLLFLHETGS
type: DOMAIN
name: Cytochrome_b_N_euk/bac
description: Cytochrome b/b6, N-terminal domain, eukaryotic/bacterial

phrase: NPTGIPSNTDMIPFHPYYTIKDILGLLLMITLLLTLVLFSPDMLGDPDNYLPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVMALVISILILIIIPLLHTSKQRSMAFRPLSQCLFWLLVADLLTLTWIGGQPVEXPXXXXGQM
type: DOMAIN
name: Cytochrome_b_C_euk/bac
description: Cytochrome b/b6, C-terminal domain, eukaryotic/bacterial
Protein sequence:
MDLLVATRNAHKTREIRQILGPGFAVSDLCSHEIPEVHESGKSFEENATLKAVAISKYFPGLVVADDSGLEVDALGGAPGVFSARYAGHEASDKQNIQKLLGALARIEPRAKRSARFRCVIALARRGELLGTFEGIVEGTITEQARGLRGFGYDPIFIPCGFQQTFAGLPAEVKNRISHRAKAIRLLAANLAPLKTRG

Annotated regions:
Protein sequence:
MHFSIPETESRSGDSGGSAYVAYNIHVNGVLHCRVRYSQLLGLHEQLRKEYGANVLPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDPLLGSSETFNSFLRRAQQETQQVPTEEVSLEVLLSNGQKVLVNVLTSDQTEDVLEAVAAKLDLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYWDSAYDDDVMENRVGLNLLYAQTVADIERGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTLRHYGYLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLPSGGTSSPGRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKKSGGSIRKMLRRRVGGTLRRSDSQQAVKSPPLLESPDASRESMVKLSSKLSAVSLRGIGTPGTDASASDVHGNFAFEGIGDEDL

Annotated regions:
phrase: YGYLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLPSGGTSSPGRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDELMVKK
type: DOMAIN
name: SNX17_FERM-like_dom
description: SNX17, atypical FERM-like domain

phrase: VSLEVLLSNGQKVLVNVLTSDQTEDVLEAVAAKLDLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSY
type: DOMAIN
name: SNX17-31_FERM_F1
description: Sortin nexin 17/31, FERM domain, F1 lobe

phrase: NIHVNGVLHCRVRYSQLLGLHEQLRKEYGANVLPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDPLLGSSETFNSFL
type: DOMAIN
name: PX_dom
description: Phox homology

phrase: MHFSIPETESRSGDSGGSAYVAYNIHVNGVLHCRVRYSQLLGLHEQLRKEYGANVLPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDPLLGSSETFNSFLRRAQQE
type: DOMAIN
name: PX_dom
description: Phox homology

phrase: GYLRFDACVADFPEKDCPVVVSAGNSELSLQLRLPGQQLREGSFRVTRMRCWRVTSSVPLPSGGTSSPGRGRGEVRLELAFEYLMSKDRLQWVTITSPQAIMMSICLQSMVDEL
type: DOMAIN
name: SNX17/31_FERM
description: Sorting nexin-17/31, FERM domain

phrase: DSAYDDDVMENRVGLNLLYAQTVADIERGWILVTKEQHRQLKSLQEKVSKKEFLRLAQTL
type: DOMAIN
name: SNX17-31_FERM_F2
description: Sortin nexin 17/31, FERM domain, F2 lobe

phrase: EEVSLEVLLSNGQKVLVNVLTSDQTEDVLEAVAAKLDLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSYW
type: DOMAIN
name: SNX17_FERM_N
description: Sorting nexin-17, FERM domain, N-terminal subdomain

phrase: EEVSLEVLLSNGQKVLVNVLTSDQTEDVLEAVAAKLDLPDDLIGYFSLFLVREKEDGAFSFVRKLQEFELPYVSVTSLRSQEYKIVLRKSY
type: DOMAIN
name: RA_dom
description: Ras-associating domain

phrase: MHFSIPETESRSGDSGGSAYVAYNIHVNGVLHCRVRYSQLLGLHEQLRKEYGANVLPAFPPKKLFSLTPAEVEQRREQLEKYMQAVRQDPLLGSSETFNSFLRR
type: DOMAIN
name: PX_dom
description: Phox homology
Protein sequence:
MDDDFDIPAGDDMMMGDGMGDFGGAEGPGMKVGEENEIGKQGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLDGKKFDSSRDRDDTFKFKLGQGQVIKGWDQGIKTMKKGENALFTIPPELAYGESGSPPTIPANATLQFDVELLSWTSVRDIAKDGGIFKKILKEGDKWENPKDPDEVFVKYEARLEDGTVVSKSEGVEFTVKDGHLCPALAKAVKTMKKGEKVLLAVKPQYGFGEMGRPAAGEGGAVPPNASLVIDLELVSWKTVTEIGDDKKILKKVLKEXEGYERPNEGAVVTVKITGKLQDGTVFLKKGHDEQEPFEFKTDEEAVIEGLDRAVLNMKKGEVALVTIPPEYAYGSTESKQDAIVPPNSTVIYEVELVSFVKDKESWDLNNSEKIEAAGTKKEEGNALFKSGKYARASKRYEKAAKFIEYDTSFSEDEKKQSKQLKITCNLNNAACKLKLKDYKQAEKLCTKVLELDSRNVKALYRRAQAYTQLADLELAEVDIKKALEIDPENRDVKLTYKTLKEKIKEINKKDAKFYSNMFSKMTKPSAEESKA

Annotated regions:
phrase: GDEVEVHYTGTLLDGKKFDSSRDRDDTFKFKLGQGQVIKGWDQGIKTMKKGENALFTIPPELAYGESGSPPTIPANATLQFDVELLSW
type: DOMAIN
name: PPIase_FKBP_dom
description: FKBP-type peptidyl-prolyl cis-trans isomerase domain

phrase: ENPKDPDEVFVKYEARLEDGTVVSKSEGVEFTVKDGHLCPALAKAVKTMKKGEKVLLAVKPQYGFGEMGRPAAGEGGAVPPNASLVIDLEL
type: DOMAIN
name: PPIase_FKBP_dom
description: FKBP-type peptidyl-prolyl cis-trans isomerase domain

phrase: DTPEVGDEVEVHYTGTLLDGKKFDSSRDRDDTFKFKLGQGQVIKGWDQGIKTMKKGENALFTIPPELAYGESGSPPTIPANATLQFDVEL
type: DOMAIN
name: PPIase_FKBP_dom
description: FKBP-type peptidyl-prolyl cis-trans isomerase domain

phrase: YERPNEGAVVTVKITGKLQDGTVFLKKGHDEQEPFEFKTDEEAVIEGLDRAVLNMKKGEVALVTIPPEYAYGSTESKQDAIVPPNSTVIYEVEL
type: DOMAIN
name: PPIase_FKBP_dom
description: FKBP-type peptidyl-prolyl cis-trans isomerase domain

phrase: VKALYRRAQAYTQLADLELAEVDIKKALEIDPE
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: AGTKKEEGNALFKSGKYARASKRYEKAAKFIEY
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: VKALYRRAQAYTQLADLELAEVDIKKALEIDPE
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: ITCNLNNAACKLKLKDYKQAEKLCTKVLELDSR
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: VKALYRRAQAYTQLADLELAEVDIKKALEIDPE
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: PDEVFVKYEARLEDGTVVSKSEGVEFTVKDGHLCPALAKAVKTMKKGEKVLLAVKPQYGFGEMGRPAAGEGGAVPPNASLVIDLELVSW
type: DOMAIN
name: PPIase_FKBP_dom
description: FKBP-type peptidyl-prolyl cis-trans isomerase domain

phrase: GAVVTVKITGKLQDGTVFLKKGHDEQEPFEFKTDEEAVIEGLDRAVLNMKKGEVALVTIPPEYAYGSTESKQDAIVPPNSTVIYEVELVSF
type: DOMAIN
name: PPIase_FKBP_dom
description: FKBP-type peptidyl-prolyl cis-trans isomerase domain
Protein sequence:
MYLLIPAAGVGKRMGCDRNKLLLEVRSQPIIAWTLLAAQAASEISWIGIISQPTDWPDFKSILANLQLTKPVEFILGGSTRQESVYNGLQALPKAAEQVLIHDGARCLATPNLLNSCAQAIRHCSGLIAAVPVKDTIKVADEDGIIQSTPDRRNLWAAQTPQGFNVELLKQCHAEGVRQGWEVTDDAALFEKCGIEVQIVEGEETNLKVTTPQDLAIAEFILNSRDNS

Annotated regions:
phrase: VLIHDGA
type: CONSERVED_SITE
name: ISPD_synthase_CS
description: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site
Protein sequence:
MDIKRTVLWVIFFMSAVMLYDNWQRDHGRPSMFFPSATHTAPAAAGGASGTGATTAGDVPAAAAGAAPSTTAPAAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKKQGDGKQPDLYITLFDHTAGHTYLARTGLLGGDFPNHNDVYTQLNPGSTSLTGDQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDAKHFQKIDFSDLDKNKANFEKSADNGWVAMVQHYFASAWIPQQGAKRDIYAEKIDPALYRVGVKQPVAAIAPGQSADVQARLFAGPEEERMLEGIAPGLELVKDYGWVTIIAKPLFWLLEKIHGYVGNWGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPFFILPVLMAVSMFVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRKLGGVKKKPA

Annotated regions:
phrase: GWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPFFILPVLMAVSMFVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYIT
type: DOMAIN
name: YidC_ALB_C
description: Membrane insertase YidC/ALB, C-terminal

phrase: WGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPFFILPVLMAVSMFVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYIT
type: DOMAIN
name: YidC/Oxa/ALB_C
description: Membrane insertase YidC/Oxa/ALB, C-terminal

phrase: QLVKFSTDVYDGEIDTRGGTLAKLTLKKQGDGKQPDLYITLFDHTAGHTYLARTGLLGGDFPNHNDVYTQLNPGSTSLTGDQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDAKHFQKIDFSDLDKNKANFEKSADNGWVAMVQHYFASAWIPQQGAKRDIYAEKIDPALYRVGVKQPVAAIAPGQSADVQARLFAGPEEERMLEGIAPGLELVKD
type: DOMAIN
name: Membr_insert_YidC_N
description: Membrane insertase YidC, N-terminal

phrase: KRTVLWVIFFMSAVMLYDNWQRDHGRPSMFFPSATHTAPAAAGGASGTGATTAGDVPAAAAGAAPSTTAPAAQAQLVKFSTDVYDGEIDTRGGTLAKLTLKKQGDGKQPDLYITLFDHTAGHTYLARTGLLGGDFPNHNDVYTQLNPGSTSLTGDQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDAKHFQKIDFSDLDKNKANFEKSADNGWVAMVQHYFASAWIPQQGAKRDIYAEKIDPALYRVGVKQPVAAIAPGQSADVQARLFAGPEEERMLEGIAPGLELVKDYGWVTIIAKPLFWLLEKIHGYV
type: DOMAIN
name: Membr_insert_YidC_N
description: Membrane insertase YidC, N-terminal

phrase: VKFSTDVYDGEIDTRGGTLAKLTLKKQGDGKQPDLYITLFDHTAGHTYLARTGLLGGDFPNHNDVYTQLNPGSTSLTGDQNTLKLSFESPVKGGVKVVKTYTFTRGSYVIGVDTKIDNVGTAPVTPTVYMELVRDNTAVETPMFSHTFLGPAVYTDAKHFQKIDFSDLDKNKANFEKSADNGWVAMVQHYFASAWIPQQGAKRDIYAEKIDPALYRVGVKQPVAAIAPGQSADVQARLFAGPEEERMLEGIAPGLELVKDYGWVTIIAKPLFW
type: DOMAIN
name: Membr_insert_YidC_N
description: Membrane insertase YidC, N-terminal

phrase: NWGWAIVLLTVLIKAVFFPLSAASYKSMARMKEITPRMQALRERFKSDPQKMNAALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLASVEMRGAPWILWIHDLSQRDPFFILPVLMAVSMFVQTSLNPTPPDPVQAKMMKFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYIT
type: DOMAIN
name: YidC/Oxa/ALB_C
description: Membrane insertase YidC/Oxa/ALB, C-terminal
Protein sequence:
MEKHENVSWMYQQELKDPFKKYLNNTDDYLALLCGPRRSHLFLPVTAVYALIFVVGVVGNLLVCLVILRHQTMKTPTNYYLFSLAVSDLLVLLLGMPLEVYEMWRNYPFLFGPVGCYFKTALFETVCFASILSVTTVSVERYVAVLHPFRAKLKSTRGRALRILGIVWGLSVLFSLPNTSIHGIKLHYFPNGSIIPGSATCTVIKPMWIYNFIIQVTSLLFYILPMTVISVLYYLMGLKLKKDQHLEADKVTANIQRPSRKSVTKMLFVLVLVFAICWAPFHIDRLFFSFVEEWTEPLAAVFNLIHVVSGVFFYLSSAVNPIIYNLLSHRFQAAFRTVIPPSCQQQHSHNHSPGPSMQRNIFLTECHLVELTEDVAPQFPRQLSVLSSQLPTALCTGQVPRKELAKS

Annotated regions:
phrase: GNLLVCLVILRHQTMKTPTNYYLFSLAVSDLLVLLLGMPLEVYEMWRNYPFLFGPVGCYFKTALFETVCFASILSVTTVSVERYVAVLHPFRAKLKSTRGRALRILGIVWGLSVLFSLPNTSIHGIKLHYFPNGSIIPGSATCTVIKPMWIYNFIIQVTSLLFYILPMTVISVLYYLMGLKLKKDQHLEADKVTANIQRPSRKSVTKMLFVLVLVFAICWAPFHIDRLFFSFVEEWTEPLAAVFNLIHVVSGVFFYLSSAVNPII
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM

phrase: SHRFQAAFRTVIPPSCQQQHSHNHSPGPSMQRNIFLTECHLVELTEDVAPQFPRQLSVLSSQLPTA
type: DOMAIN
name: NMU-R2_C
description: Neuromedin-U receptor 2, C-terminal domain
Protein sequence:
MNKQILTLALCIGLCLAVGFAGSTFTPKPASWYYTTLVKPSWNPPDWLFPPVWTILFIMMGTALAKVLGTGWKKNEVNVGVVLFAIQLMLNLGWSASFFGMQSPLAGLVDIVLLWIFIVLTMLAFARVSKPASLLLVPYLCWVSFASYLNFTILQLNP

Annotated regions:
Protein sequence:
MASSTHPEMPELSGSYENKYLCLTICGYRKAGMTEEDYHNHMVHISAPMTKHLMVKYGIRRWTQIHNQAATRALMAELFDPQMANVADFDCFSQVVFQNVEDYKRMKQDPWYQEHLVGDHENFADTKRTLVTIGWIEEFVRDGEAVDGFKS

Annotated regions:
phrase: KAGMTEEDYHNHMVHISAPMTKHLMVKYGIRRWTQIHNQAATRALMAELFDPQMANVADFDCFSQVVFQNVEDYKRMKQDPWYQEHLVGDHENFAD
type: DOMAIN
name: EthD_dom
description: EthD domain
Protein sequence:
MIIPETDSFFFQEQPQHQPLYPDEALSPSLFGFDHYDHFYESFLPSQEIFLPSPKTRVFNESQELDSFHTPKHQKLIDSSFHFNSHDPFSPSPESNYLLDSYITEASNISKFQAPDFSSTFKVGWTEQGDTKKRELSAQSIAARKRRRRITEKTQELGKLIPGSQKHNTAEMFNAAAKYVKFLQAQIEILQLKQTKMQTLDSSKVGREMQFLLGSQEIQEKLSTEEVCVVPREMVQVLKAEECILTNPKISRDINKLLSTNLMN

Annotated regions:
phrase: ITEKTQELGKLIPGSQKHNTAEMFNAAAKYVKFLQAQIEIL
type: DOMAIN
name: bHLH95_bHLH
description: Transcription factor bHLH95-like, basic helix-loop-helix domain

phrase: SIAARKRRRRITEKTQELGKLIPGSQKHNTAEMFNAAAKYVKFL
type: DOMAIN
name: bHLH_dom
description: Myc-type, basic helix-loop-helix (bHLH) domain

phrase: RELSAQSIAARKRRRRITEKTQELGKLIPGSQKHNTAEMFNAAAKYVKF
type: DOMAIN
name: bHLH_dom
description: Myc-type, basic helix-loop-helix (bHLH) domain

phrase: SIAARKRRRRITEKTQELGKLIPGSQKHNTAEMFNAAAKYVKFLQAQIE
type: DOMAIN
name: bHLH_dom
description: Myc-type, basic helix-loop-helix (bHLH) domain
Protein sequence:
MAENLANHLLDEMIEALSSLPGIGRKSAFRISFHLLRLEQGLFNQFIHQLTDTKNKIKFCKRCGSYAETEICEICVSEKRDSHTFCVVEQPEDIFFIENTREFQGKYHVLNGVISPLEGIGPRDLRIKELLERIEPEQVKEVLIATNPTLEGDATADYLANQLKPISVNVTRIAYGITVGGSIELADQYTLGRAIRSRLQL

Annotated regions:
phrase: IKFCKRCGSYAETEICEI
type: DOMAIN
name: Rcmb_RecR_Znf
description: Recombination protein RecR, zinc finger domain

phrase: HTFCVVEQPEDIFFIENTREFQGKYHVLNGVISPLEGIGPRDLRIKELLERIEPEQVKEVLIATNPTLEGDATADYLANQLKPIS
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: HTFCVVEQPEDIFFIENTREFQGKYHVLNGVISPLEGIGPRDLRIKELLERIEPEQVKEVLIATNPTLEGDATADYLANQLKPISVNVTRIAYGITVGGSIELADQYTLGR
type: DOMAIN
name: TOPRIM_RecR
description: RecR, TOPRIM domain

phrase: HTFCVVEQPEDIFFIENTREFQGKYHVLNGVISPLEGIGPRDLRIKELLERIEPEQVKEVLIATNPTLEGDATADYLANQLKPISVNVTRIAYGI
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: CKRCGSYAETEICEICVSEKR
type: DOMAIN
name: Rcmb_RecR_Znf
description: Recombination protein RecR, zinc finger domain

phrase: TFCVVEQPEDIFFIENTREFQGKYHVLNGVISPLEGIGPRDLRIKELLERIEPEQVKEVLIATNPTLEGDATADYLANQLKPISVNVTRI
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain
Protein sequence:
MPSQMREAITRLNEEFGCRIFVISLGDKKRVFDGGKVGTWAATLDELARERNVVIIVSAGNRGPRAGSRVEQGVTEYPDYLLEANNRLLEPAGAMNVITVGSIAQGDGLDADMAGDVRVRPITRANEPSPFSRVGPGLGGGTKPDLVDVGGTLIFDPVVARLRGGEDRPSAGVLTLNHNYLNRLFTAGSGTSYSAPRVGFSAGQILARFPGASANLVRALLINSAEVPQQASERLQILGSEAVRSVCGHGLIDLERAGFSDDARVTLYTEDELPLDHFAVYRIPIPEVFQEGNTERTIRVTLAYDPPVRHTRNDYAGVGMSFRLVRGCEPNFIFEHYRKRAEVEGPFPEMENRFNCKLEPGPKVREKSSVQRASITFKRGIEQYGDSYYLVVRCESGWATHVDRQPFAVVVELLQKAEVRLYERLRQRVRA

Annotated regions:
phrase: REAITRLNEEFGCRIFVISLGDKKRVFDGGKVGTWAATLDELARERNVVIIVSAGNRGPRAGSRVEQGVTEYPDYLLEANNRLLEPAGAMNVITVGSIAQGDGLDADMAGDVRVRPITRANEPSPFSRVGPGLGGGTKPDLVDVGGTLIFDPVVARLRGGEDRPSAGVLTLNHNYLNRLFTAGSGTSYSAPRVGFSAGQILARFPGASANLVRALLINSAEVPQQASERLQILGSEAVRSVCGH
type: DOMAIN
name: Peptidase_S8/S53_dom
description: Peptidase S8/S53 domain

phrase: EAITRLNEEFGCRIFVISLGDKKRVFDGGKVGTWAATLDELARERNVVIIVSAGNRGPRAGSRVEQGVTEYPDYLLEANNRLLEPAGAMNVITVGSIAQGDGLDADMAGDVRVRPITRANEPSPFSRVGPGLGGGTKPDLVDVGGTLIFDPVVARLRGGEDRPSAGVLTLNHNYLNRLFTAGSGTSYSAPRVGFSAGQILARFPGASANLVRALLINSA
type: DOMAIN
name: Y4bN_pept_dom
description: Y4bN, peptidase domain
Protein sequence:
MSEYSIFTSESVSEGHPDKMADQISDAILDAIIKDDPNARVAVETLVKTGMAVIAGEVRTNTYVDLEDIVRSVILDIGYNSSDVGFDGASCAVLNAIGKQSGDIAMGVDEASEKDLGAGDQGLMFGYATNETDVLMPAPIYYSHRLVERQAYLRKNSILPWLRPDAKSQVTLRYENGKPVAVEAVVLSTQHTPDVKQSDIREAVMEEIIKHVLPEEWLHSNTQYHINPTGQFIIGGPVGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVASGLAAKCEIQVSYAIGVSEPTSISVNTFGTGKISDDKIATLVREHFDLRPRGLIDMLDLKRPIYRPTASYGHFGRTGDSFSWERTDKADALRAAAGI

Annotated regions:
phrase: IGGPVGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVASGLAAKCEIQVSYAIGVSEPTSISVNTFGTGKISDDKIATLVREHFDLRPRGLIDMLDLKRPIYRPTASYGHFGRTGDSFSWE
type: DOMAIN
name: S-AdoMet_synt_C
description: S-adenosylmethionine synthetase, C-terminal

phrase: GGGAFSGK
type: CONSERVED_SITE
name: ADOMET_SYNTHASE_CS
description: S-adenosylmethionine synthetase, conserved site

phrase: GAGDQGLMFG
type: CONSERVED_SITE
name: ADOMET_SYNTHASE_CS
description: S-adenosylmethionine synthetase, conserved site

phrase: IFTSESVSEGHPDKMADQISDAILDAIIKDDPNARVAVETLVKTGMAVIAGEVRTNTYVDLEDIVRSVILDIGYNSSDVGFDGASCAVLNAIGKQ
type: DOMAIN
name: S-AdoMet_synt_N
description: S-adenosylmethionine synthetase, N-terminal

phrase: LGAGDQGLMFGYATNETDVLMPAPIYYSHRLVERQAYLRKNSILPWLRPDAKSQVTLRYENGKPVAVEAVVLSTQHTPDVKQSDIREAVMEEIIKHVLPEEWLHSNTQYHINPTGQ
type: DOMAIN
name: S-AdoMet_synt_central
description: S-adenosylmethionine synthetase, central domain
Protein sequence:
MYVVSTKQMLNNAQRGGYAVPAFNIHNLETMQVVVETAASMHAPVIIAGTPGTFTHAGTENLMALVSAMAKQYHHPLAIHLDHHTKFDDIAQKVRSGVRSVMIDASHLPFAQNISRVKEVVDFCHRFDVSVEAELGQLGGQEDDVQVNEADALYTNPVQAREFAEATGIDSLAVAIGTAHGMYASAPALDFSRLENIRQWVNLPLVLHGASGLSTKDIQQTIKLGICKINVATELKNAFSQALKNYLTEHPEATDPRDYLQSAKFAMRDVVSKVIADCGCEGRA

Annotated regions:
Protein sequence:
MNYKNKILVSESGLTQKHLIHGDEELFQHELRTIXARNWLFLTHDSLIPSPGDYVTAKMGIDEVIVSRQSDGSIRAFLNVCRHRGKTLVNAEAGNAKGFVCSYHGWGFGSNGELQSVPFEKELYGESLNKKCLGLKEVARVESFHGFIYGCFDQEAPSLMDYLGDAAWYLEPIFKHSGGLELVGPPGKVVIKANWKAPAENFVGDAYHVGWTHASSLRTGESIFSSLAGNAVLPPEGAGLQMTSKYGSGMGVLWDGYSGVHSADLVPELMAFGGAKQERLNKEIGDVPARIYRSHLNCTVFPNNSVLTCSGVFKVWNPIDANTTEVWTYAIVEKDMPEDLKRRLADAVQRTFGPAGFWESDDNDNMETASQNGKKYQSRDSDLISNLGFGKDVYGDAVYPGVVGKSAIGETSYRGFYRAYQAHVSSSNWAEFEDASSTWHTELTKTTDR

Annotated regions:
phrase: GLELVGPPGKVVIKANWKAPAENFVGDAYHVGWTHASSLRTGESIFSSLAGNAVLPPEGAGLQMTSKYGSGMGVLWDGYSGVHSADLVPELMAFGGAKQERLNKEIGDVPARIYRSHLNCTVFPNNSVLTCSGVFKVWNPIDANTTEVWTYAIVEKDMPEDLKRRLADAVQRTFGPAGFWESDDNDNMETASQNGKKYQSRDSDLISNLGFGKDVYGDAVYPGVVGKSAIGETSYRGFYRAYQAHV
type: DOMAIN
name: RHO_NdoB-like_C
description: Ring-hydroxylating dioxygenase, alpha subunit NdoB-like, C-terminal

phrase: WLFLTHDSLIPSPGDYVTAKMGIDEVIVSRQSDGSIRAFLNVCRHRGKTLVNAEAGNAKGFVCSYHGWGFGSNGELQSVPFEKE
type: DOMAIN
name: Rieske_2Fe-2S
description: Rieske [2Fe-2S] iron-sulphur domain

phrase: MDYLGDAAWYLEPIFKHSGGLELVGPPGKVVIKANWKAPAENFVGDAYHVGWTHASSLRTGESIFSSLAGNAVLPPEGAGLQMTSKYGSGMGVLWDGYSGVHSADLVPELMAFGGAKQERLNKEIGDVPARIYRSHLNCTVFPNNSVLTCSGVFKVWNPIDANTTEVWTYAIVEKDMPEDLKRRLADAVQRTFGPAGFWESDDNDNMETASQNGKKYQSRDSDLISNLGFGKDVYGDAVYPGVVGKSAIGETSYRGFYRAYQAHV
type: DOMAIN
name: Ring_hydroxy_dOase_asu_C_dom
description: Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain

phrase: CRHRGKTLVNAEAGNAKGFVCSY
type: BINDING_SITE
name: Ring-hydroxy_dOase_2Fe2S_BS
description: Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site

phrase: NWLFLTHDSLIPSPGDYVTAKMGIDEVIVSRQSDGSIRAFLNVCRHRGKTLVNAEAGNAKGFVCSYHGWGFGSNGELQSVPFEK
type: DOMAIN
name: Rieske_2Fe-2S
description: Rieske [2Fe-2S] iron-sulphur domain
Protein sequence:
MSSYFFTHFALHTIGTLGGVIPDFPWLSVSILFPIGCAFLIPFFPDKGEGKEVRWFALSVALITFLVTVGSYINGFDINNEDVQLKESINWLPNLGLTWSVGADGMSMPLILLTSFITALAVLAAWPVKFKPKLFFFLILIMDGGQIAVFAVQDMLLFFLSWELELLPVYLLLAIWGGKNRQYAATKFIIYTAGSSIFILLAALAMGFYGTEVPNFEFSHLANQDFGQNFQILCYIGLLIAFGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRFNAQLLPIAHAQFSPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMGGVGQKMRIMFALWTACSLASLALPGMSGFVSELMVFTGFVTDEVYTLPFRVIMASLAAIGVILTPIYLLSMLREIFFGKENPKLTEDKNLIDAEPREIYIIACLLLPIIGIGLYPRLVTESYLATINNLVDRDLNAVKNIPKTNVFAGNKSNQILKAPTI

Annotated regions:
phrase: QDMLLFFLSWELELLPVYLLLAIWGGKNRQYAATKFIIYTAGSSIFILLAALAMGFYGTEVPNFEFSHLANQDFGQNFQILCYIGLLIAFGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRFNAQLLPIAHAQFSPLLIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFSSLGTSGAMLQMVSHGLIGASLFFLVGATYDRTKTLKLDEMGGVGQKMRIMFALWTACSLASLALPGMSGFVSELMVFTGFVTDEVYTLPF
type: DOMAIN
name: ND/Mrp_TM
description: NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domain
Protein sequence:
MKYNDLRDFLTLLEQQGELKRITLPVDPHLEITEIADRTLRAGGPALLFENPKGYSMPVLCNLFGTPKRVAMGMGQEDVSALREVGKLLAFLKEPEPPKGFRDLFDKLPQFKQVLNMPTKRLRGAPCQQKIVSGDDVDLNRIPIMTCWPEDAAPLITWGLTVTRGPHKERQNLGIYRQQLIGKNKLIMRWLSHRGGALDYQEWCAAHPGERFPVSVALGADPATILGAVTPVPDTLSEYAFAGLLRGTKTEVVKCISNDLEVPASAEIVLEGYIEQGETAPEGPYGDHTGYYNEVDSFPVFTVTHITQREDAIYHSTYTGRPPDEPAVLGVALNEVFVPILQKQFPEIVDFYLPPEGCSYRLAVVTIKKQYAGHAKRVMMGVWSFLRQFMYTKFVIVCDDDVNARDWNDVIWAITTRMDPARDTVLVENTPIDYLDFASPVSGLGSKMGLDATNKWPGETQREWGRPIKKDPDVVAHIDAIWDELAIFNNGKSA

Annotated regions:
phrase: LTLLEQQGELKRITLPVDPHLEITEIADRTLRAGGPALLFENPKGYSMPVLCNLFGTPKRVAMGMGQEDVSALREVGKL
type: DOMAIN
name: UbiD-like_N
description: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase-like, N-terminal domain

phrase: GAPCQQKIVSGDDVDLNRIPIMTCWPEDAAPLITWGLTVTRGPHKERQNLGIYRQQLIGKNKLIMRWLSHRGGALDYQEWCAAHPGERFPVSVALGADPATILGAVTPVPDTLSEYAFAGLLRGTKTEVVKCISNDLEVPASAEIVLEGYIEQGETAPEGPYGDHTGYYNEVDSFPVFTVTHITQREDAIYHSTYTGR
type: DOMAIN
name: UbiD_Rift_dom
description: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase-like, Rift-related domain

phrase: VLGVALNEVFVPILQKQFPEIVDFYLPPEGCSYRLAVVTIKKQYAGHAKRVMMGVWSFLRQFMYTKFVIVCDDDVNARDWNDVIWAITTRMDPARDTVLVENTPIDYLDFASPVSGLGSKMGLD
type: DOMAIN
name: UbiD-like_C
description: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase-like, C-terminal domain
Protein sequence:
MMHSPIPKKDIKEFTKGQLVDWLNDHSVRSFRANQILRWIYARQADTFDAMTDLKKETQALMARHFTIDRLNIQCVETSRDGSRKYLFRLKDGHHIETVLIPEKGHATLCISSQVGCAQGCRFCLTARNGFTRNLTADEMVSQVRDVKNDMDNPGDLTNIVVMGMGEPLANYDNLIRAMNIILDGEFGLKFAKRRVTVSSAGMVPRLEDLGRDIPVNLAISLNATDNKTRDHLMPINRKYPLEILLEACRKYKLQPHRRITFEYILMDGINDSKADALRLAELLRPIRAKINLIPFNEHRGSDFKCPAESVIQCFQQILIDRNYTVMIRRSKGQDISAACGQLAAKDNPRAIKSSNA

Annotated regions:
phrase: ATLCISSQVGCAQGCRFCLTARNGFTRNLTADEMVSQVRDVKNDMDNPGDLTNIVVMGMGEPLANYDNLIRAMNIILDGEFGLKFAKRRVTVSSAGMVPRLEDLGRDIPVNLAISLNATDNKTRDHLMPINRKYPLEILLEACRKYKLQPHRRITFEYILMDGINDSKADALRLAELLRPIRAKINLIPFNEHRGSDFKCPAESVIQCFQQIL
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: IKEFTKGQLVDWLNDHSVRSFRANQILRWIYARQADTFDAMTDLKKETQALMARHFT
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: PKKDIKEFTKGQLVDWLNDHSVRSFRANQILRWIYARQADTFDAMTDLKKETQALMARHFTIDRLNIQCVETSRDGSRKYLFRLKDGHHIETVLIPEKGHATLCISSQVGCAQGCRFCLTARNGFTRNLTADEMVSQVRDVKNDMDNPGDLTNIVVMGMGEPLANYDNLIRAMNIILDGEFGLKFAKRRVTVSSAGMVPRLEDLGRDIPVNLAISLNATDNKTRDHLMPINRKYPLEILLEACRKYKLQPHRRITFEYILMDGINDSKADALRLAELLRPIRAKINLIPFNEHRGSDFKCPAESVIQCFQQILIDRNYTVMIRRSKGQDISAACGQLAAKDNP
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SSQVGCAQGCRFCLTARNGFTRNLTADEMVSQVRDVKNDMDNPGDLTNIVVMGMGEPLANYDNLIRAMNIILDGEFGLKFAKRRVTVSSAGMVPRLEDLGRDIPVNLAISLNATDNKTRDHLMPINRKYPLEILLEACRKYKLQPHRRITFEYILMDGINDSKADAL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: EKGHATLCISSQVGCAQGCRFCLTARNGFTRNLTADEMVSQVRDVKNDMDNPGDLTNIVVMGMGEPLANYDNLIRAMNIILDGEFGLKFAKRRVTVSSAGMVPRLEDLGRDIPVNLAISLNATDNKTRDHLMPINRKYPLEILLEACRKYKLQPHRRITFEYILMDGINDSKADALRLAELLRPIRAKINLIPFNEHRGSDFKCPAESVIQCFQQILIDRNYTVMIRRSKGQ
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MNQELTNNPFNPLTPPKAFDEIKVSLASPERILSWSYGEIKKPETINYRTFKPERDGLFCARIFGPIKDYECLCGKYKRMKYRGVVCEKCGVEVTLQKVRRERMGHIELAAPVAHIWFLKSLPSRIGLMLDMTLRDLERILYFENYVVIEPGLTDLTYGQLMGEEEFMDAQDAYGADAFQANIGAEAIREMLSQIDLESEANQLREDLKEATGELKPKKIIKRLKIVESFLESGNRPEWMVMTVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIIRNEKRMLQESVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDFSGRSVIVTGPELKLHQCGLPKKMALELFKPFIYSRLEAKGLSSTVKQAKKLVEKERPEVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNVLSPANGAPIIVPSQDMILGLYYVTLAREGMKGEGMIFADVDEVRHALDAGEIHLHSKITARLPQIDEEGNEIMVRFDTTPGRVMLGALLPLNAKAPFDLVNRLLRKKEVQQVIDTVYRYCGQKESVIFCDQIMSMGFKEAFKAGISFGKDDMVIPDTKWTLVEDARDQVEEFEQQYMDGLITQGEKYNKVIDAWSKVNDKVTDAMMGTISASKRDENDAEMEPNSVYMMAHSGARGSVTQMKQLGGMRGLMAKPNGEIIETPIISNFKEGLTVLE

Annotated regions:
phrase: NVLSPANGAPIIVPSQDMILGLYYVTLAREGMKGEGMIFADVDEVRHALDAGEIHLHSKITARLPQIDEEGNEIMVRFDTTPGRVMLGALLPLNAKAPFDLVNRLLRKKEVQQVIDTVYRYCGQKESVIFCDQIMSMGFKEAFKAGISFGKDD
type: DOMAIN
name: RNA_pol_Rpb1_3
description: RNA polymerase Rpb1, domain 3

phrase: KAFDEIKVSLASPERILSWSYGEIKKPETINYRTFKPERDGLFCARIFGPIKDYECLCGKYKRMKYRGVVCEKCGVEVTLQKVRRERMGHIELAAPVAHIWFLKSLPSRIGLMLDMTLRDLERILYFENYVVIEPGLTDLTYGQLMGEEEFMDAQDAYGADAFQANIGAEAIREMLSQIDLESEANQLREDLKEATGELKPKKIIKRLKIVESFLESGNRPEWMVMTVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIIRNEKRMLQESVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQN
type: DOMAIN
name: RNA_pol_Rpb1_1
description: RNA polymerase Rpb1, domain 1

phrase: KQAKKLVEKERPEVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQLEARVLM
type: DOMAIN
name: RNA_pol_asu
description: RNA polymerase, alpha subunit

phrase: GKRVDFSGRSVIVTGPELKLHQCGLPKKMALELFKPFIYSRLEAKGLSSTVKQA
type: DOMAIN
name: RNA_pol_asu
description: RNA polymerase, alpha subunit

phrase: EWMVMTVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPDIIIRNEKRMLQESVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDFSGRSVIVTGPELKLHQCGLPKKMALELFKPFIYSRLEAKGLSSTVKQAKKLVEKERPEVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQLEARVLMMSTNNVLSPANGAPIIVPSQDMILGLYYV
type: DOMAIN
name: RNA_pol_N
description: RNA polymerase, N-terminal

phrase: ITQGEKYNKVIDAWSKVNDKVTDAMMGTISASKRDENDAEMEPNSVYMMAHSGARGSVTQMKQLGGMRGLMAKPNGEIIETPIISN
type: DOMAIN
name: RNA_pol_Rpb1_4
description: RNA polymerase Rpb1, domain 4