nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MLDPNLLRNEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVQTENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGEELDQAKTELELLLAEIRDIALAIPNTPDDSVPVGKDENDNVEVKRWGTPREFDFEVRDHVTLGEMHAGLDFAAAVKLTGARFVVMKGQIAHLHRALAQFMLDLHTEQHGYSETYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLDEEAESSNYALIPTAEVPLTNLVRDEIIDEDDLPIKLTAHSPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEVSMDALEEMTGHAEKVLELLGLPYRRMALCTGDMGFGATKTFDLEVWVPAQNTYREISSCSNVGDFQARRMQARCRTKADKKTRLVHTLNGSGLAVGRALVAVMENYQQADGRIEIPEVLRPYMKGQQYIG

Annotated regions:
phrase: LHRALAQFMLDLHTEQHGYSETYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLDEEAESSNYALIPTAEVPLTNLVRDEIIDEDDLPIKLTAHSPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEVSMDALEEMTGHAEKVLELLGLPYRRMALCTGDMGFGATKTFDLEVWVPAQNTYREISSCSNVGDFQARRMQARCRTKADKKTRLVHTLNGSGLAVGRALVAVMENYQQADGRIEI
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: ESSNYALIPTAEVPLTNLVRDEIIDEDDLPIKLTAHSPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEVSMDALEEMTGHAEKVLELLGLPYRRMALCTGDMGFGATKTFDLEVWVPAQNTYREISSCSNVGDFQARRMQARCRTKADKKTRLVHTLNGSGLAVGRALVAVMEN
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: DNVEVKRWGTPREFDFEVRDHVTLGEMHAGLDFAAAVKLTGARFVVMKGQIAHLHRALAQFMLDLHTEQHGYSETYVPYLVNHDTLYGTGQLPKFAGDLFHTRPLDEEAESSNYALIPTAEVPLTNLVRDEIIDEDDLPIKLTAHSPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPEVSMDALEEMTGHAEKVLELLGLPYRRMALCTGDMGFGATKTFDLEVWVPAQNTYREISSCSNVGDFQARRMQARCRTKADKKTRLVHTLNGSGLAVGRALVAVMENYQQADGRIEIPEVLRPY
type: DOMAIN
name: SerRS_core
description: Serine-tRNA ligase catalytic core domain

phrase: MLDPNLLRNEPDAVAEKLARRGFKLDVDKLRALEERRKVLQVQTENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGEELDQAKTELELLLAEIRDIALAIPNT
type: DOMAIN
name: Ser-tRNA-synth_1_N
description: Serine-tRNA synthetase, type1, N-terminal
Protein sequence:
MSKLFWAMLAFISRLPVPSRWSQGLDFEQYSRGIVMFPFIGLILGGVSGLIFILLQPWCGIPLAALFCILALALLTGGFHLDGLADTCDGIFSARRRERMLEIMRDSRLGTHGGLALIFVLLAKILVVSELALRGTPMLAALAAACAAGRGSAVLLMYRHRYAREEGLGNVFIGKVSGRQTCITLGLAIIIATVLLPGMQGLAAMVVTCAAIFILGQLLKRTLGGQTGDTLGAAIELGELIFLLALL

Annotated regions:
Protein sequence:
METIFAQSSSFGKAGVAVFRVSGTKSLEVLKLLTGKSNFKPRFMYYQKLTSPESNDLIDNAMVVYFKAPNSFTGEDVVEIHTHGSKAISIMLTNALLNIPGVRLAEAGEFTKRAFLNNKFDLTAAEGIADLINAETIMQHKQAIRQAGGALEELYNSWRSQLLRIISLLEAYIDFPDEDIPESVLKDVTNTHKTLINTISEYLNDNRKGELLRSGLKLAIIGPPNAGKSSLLNFLMRRDIAIVSNIAGTTRDIIEGHLDIGGYPIILQDTAGIRGESNDVIEQEGIKRAIDSAKKADIKIVMFDAETLDSAVNEDITGLIDENTIVIINKIDLIPENRIFNIENKYRCLKVSIKNNIALPSILKNIEEIAENMAGFTETPYITNERHRHHLKQALVYLKDFNLDNDLVLATEDIRMTMRRIGAITGIIDVEEILGEIFKNFCIGK

Annotated regions:
phrase: ETIFAQSSSFGKAGVAVFRVSGTKSLEVLKLLTGKSNFKPRFMYYQKLTSPESNDLIDNAMVVYFKAPNSFTGEDVVEIHTHGSKAISIMLTNALLNIPGVRLAEAGEFTKRAFLN
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal

phrase: TIFAQSSSFGKAGVAVFRVSGTKSLEVLKLLTGKSNFKPRFMYYQKLTSPESNDLIDNAMVVYFKAPNSFTGEDVVEIHTHGSKAISIMLTNALLNIPGVRLAEAGEFTKRAFLNN
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal

phrase: LTAAEGIADLINAETIMQHKQAIRQAGGALEELYNSWRSQLLRIISLLEAYIDFPDEDIPESVLKDVTNTHKTLINTISEYLNDNRKGELLRSGLKLAIIGPPNAGKSSLLNFLMRRDIAIVSNIAGTTRDIIEGHLDIGGYPIILQDTAGIRGESNDVIEQEGIKRAIDSAKKADIKIVMFDAETLDSAVNEDITGLIDENTIVIINKIDLIPENRIFNIENKYRCLKVSIKNNIALPSILKNIEEIAENMAGFTETPYITNERHRHHLKQALVYLKDFNLDNDLVLATEDIRMTMRRIGAITGIIDVEEILGEIFKNF
type: DOMAIN
name: MnmE_helical
description: MnmE, helical domain

phrase: LKLAIIGPPNAGKSSLLNFLMRRDIAIVSNIAGTTRDIIEGHLDIGGYPIILQDTAGIRGESNDVIEQEGIKRAIDSAKKADIKIVMFDAETLDSAVNEDITGLIDENTIVIINKIDLIPENRIFNIENKYRCLKVSI
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: LAIIGPPNAGKSSLLNFLMRRDIAIVSNIAGTTRDIIEGHLDIGGYPIILQDTAGIRGESNDVIEQEGIKRAIDSAKKADIKIVMFDAETLDSAVNEDITGLIDENTIVIIN
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: GLKLAIIGPPNAGKSSLLNFLMRRDIAIVSNIAGTTRDIIEGHLDIGGYPIILQDTAGIRGESNDVIEQEGIKRAIDSAKKADIKIVMFDAETLDSAVNEDITGLIDENTIVIINKIDLIPENRIFNIENKYRCLKVSIKNNIALPSILKNIEEIA
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain

phrase: RSGLKLAIIGPPNAGKSSLLNFLMRRDIAIVSNIAGTTRDIIEGHLDIGGYPIILQDTAGIRGESNDVIEQEGIKRAIDSAKKADIKIVMFDAETLDSAVNEDITGLIDENTIVIINKIDLIPENRIFNIENKYRCLKVSIKNNIALPSILKNIEEIA
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain
Protein sequence:
MRAEARGGLERFCSAGKGRGLRALRPFHVGDLLFSCPAYACVLTVGERGHHCECCFARKEGLSKCGRCKQAFYCDVECQKEDWPLHKLECSSMVVFGENWNPSETVRLTARILAKQKMHPERTPSEKLLAVREFESHLDKLDNEKKDLIQSDIAALHQFYSKHLEFPDHSSLVVLFAQVNCNGFTIEDEELSHLGSAIFPDVALMNHSCCPNVIVTYKGTLAEVRAVQEIHPGDEVFTSYIDLLYPTEDRNDRLRDSYFFTCECRECTTKDKDKAKVEIRKLSNPPQAEAIRDMVRYARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEIAHGKDHPYISEIKQEIESH

Annotated regions:
phrase: GGLERFCSAGKGRGLRALRPFHVGDLLFSCPAYACVLTVGERGHHCECCFARKEGLSKCGRCKQAFYCDVECQKEDWPLHKLECSSMVVFGENWNPSETVRLTARILAKQKMHPERTPSEKLLAVREFESHLDKLDNEKKDLIQSDIAALHQFYSKHLEFPDHSSLVVLFAQVNCNGFTIEDEELSHLGSAIFPDVALMNHSCCPNVIVTYKGTLAEVRAVQEIHPGDEVFTSYIDLLYPTEDRNDRLRDSYFFTCECRECT
type: DOMAIN
name: SMYD2_SET
description: SMYD2, SET domain

phrase: CECCFARKEGLSKCGRCKQAFYCDVECQKEDWPLHKLE
type: DOMAIN
name: Znf_MYND
description: Zinc finger, MYND-type

phrase: GRGLRALRPFHVGDLLFSCPAYACVLTVGERGHHCECCFARKEGLSKCGRCKQAFYCDVECQKEDWPLHKLECSSMVVFGENWNPSETVRLTARILAKQKMHPERTPSEKLLAVREFESHLDKLDNEKKDLIQSDIAALHQFYSKHLEFPDHSSLVVLFAQVNCNGFTIEDEELSHLGSAIFPDVALMNHSCCPNVIVTYKGTLAEVRAVQEIHPGDEVFTS
type: DOMAIN
name: SET_dom
description: SET domain

phrase: CECCFARKEGLSKCGRCKQAFYCDVECQKEDWPLHKLE
type: DOMAIN
name: Znf_MYND
description: Zinc finger, MYND-type

phrase: GGLERFCSAGKGRGLRALRPFHVGDLLFSCPAYACVLTVGERGHHCECCFARKEGLSKCGRCKQAFYCDVECQKEDWPLHKLECSSMVVFGENWNPSETVRLTARILAKQKMHPERTPSEKLLAVREFESHLDKLDNEKKDLIQSDIAALHQFYSKHLEFPDHSSLVVLFAQVNCNGFTIEDEELSHLGSAIFPDVALMNHSCCPNVIVTYKGTLAEVRAVQEIHPGDEVFTSY
type: DOMAIN
name: SET_dom
description: SET domain
Protein sequence:
MKLVFASNNLNKIKEIQSILNGSIQILSLEEIGCHEEIPETADTIEGNAILKANYVTEKYGYDCFADDTGLEVTALNGAPGVFSARYAGEQKDANDNMDKLLDALKEESDRTAKFKTVIALNLNGEQHLFTGIAKGEITFSKTGNHGFGYDPIFQPENYTETFAELASEIKNKISHRAKATEQLIDFLNSTK

Annotated regions:
Protein sequence:
VKSTNLMAFVATKMLERQEDLDTCTEMQVEKMKTSTKARLRTESSFAPRTWEDAIKDEILRRSVDTSSLDKWPELKQELENVSDALKADSLWLPMKSLSLYSKVSNQEPSSIPIGEMKHQILTRLKLICSRLEKLDLNLSKAVLGIQNSEDLILIIYNRDVCKNTILMIKSLCNSLI

Annotated regions:
phrase: VKSTNLMAFVATKMLERQEDLDTCTEMQVEKMKTSTKARLRTESSFAPRTWEDAIK
type: DOMAIN
name: Flu_C_NS2
description: Influenza C non-structural protein NS2
Protein sequence:
MYKIAFDVMGSDLGSLTAIKAASEFIKEHNDLYLILVGDETEIKTALEQNPIDKNKYEILPTTQVIDMNGSILDIRRKKDASIIRTLELVRDQKVDGMLTAGNSAAFIGAAHFILGELNNIVRAGFMPTMPNAKNKLTLLLDVGANSENTPEDLINYAKMANIYYTEVLKNPNATVGLLNIGTEKSKGLELQKQTFKQLEKLKNINFVGNVESRDVLTGNVDIIVTDGYSGNICLKACEGAAKVLLTEIKKEITSSFIRKLAALVLKKSFKNVAAKFDYKNHAGAILLGVKGICFKSHGSSDVRSFKATLRMTLDAIKNNIVEKIEKGLIKNEY

Annotated regions:
Protein sequence:
MKHKVGILGGTFDPPHLAHLRMAEEAKKQLGLEKILFLPNKIPPHKHISGMASNDERVEMLQLMIEGIDSFEIDTRELMRAGKSYTYDTMRDMISEQPDTDFYFIIGGDMVEYLPKWYHIDDLVKMVTFVGVNRPSYQTEVPYDIVKINMPETTISSTEIRNNIENASTFLPEKVWSYIKEHQLYGKK

Annotated regions:
phrase: ILGGTFDPPHLAHLRMAEEAKKQLGLEKILFLPNKIPPHKHISGMASNDERVEMLQLMIEGIDSFEIDTRELMRAGKSYTYDTMRDMISEQPDTDFYFIIGGDMVEYLPKWYHIDDLVKMVTFVGVNRPSYQTEVPYDIVKINMPETTISSTEIR
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: VGILGGTFDPPHLAHLRMAEEAKKQLGLEKILFLPNKIPPHKHISGMASNDERVEMLQLMIEGI
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain
Protein sequence:
MILVLDFGSQYTQLIARRLRESGIYAEIVPFFESIENIQKKAPKGLILSGGPASVYAKDAYKPSKKIFDLDLPILGICYGMQYLVDFFGGVVACTNEQEFGKAILEITQDSVIFEGVKIKSLVWMSHMDKVIELPKGFTTLAKSPNSPHCAIENAKIFGLQFHPEVIQSEEGGKILENFALLVCGCEKTWGMQHFAQKEMARLKEKIANAKVLCAVSGGVDSTVVATLLHRAIKDNLIAVFVDHGLLRKNEKEKVQAMFKDLQIPLNTIDAKEIFLSKLKGVSEPELKRKIIGETFIEAFEKEAKKHHLKGKIEFLAQGTLYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEVRLLGKELGISQDFLMRHPFPGPGLAIRILGEVSESKIRCLQEADFIFIEELKKANLYDKVWQAFCVLLNVNSVGVMGDNRTYENAICLRAVNASDGMTASFSFLEHSFLEKVSNRITNEVSGINRVVYDITSKPPGTIEWE

Annotated regions:
phrase: FAQKEMARLKEKIANAKVLCAVSGGVDSTVVATLLHRAIKDNLIAVFVDHGLLRKNEKEKVQAMFKDLQIPLNTIDAKEIFLSKLKGVSEPELKRKIIGETFIEAFEKEAKKHHLKGKIEFLAQGTLYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEVRLLGKELGISQDFLMRHPFPGPGLAIRILGEVSESKIRCLQEADFIFIEELKKANLYDKVWQAFCVLLNVNSVGVMGDNRTYENAICLRAVNASDGMTASFSFLEHSFLEKVSNRITNEVSGINRVVYDITSKPPGTIEW
type: DOMAIN
name: GMP_synth_C
description: GMP synthase, C-terminal

phrase: IANAKVLCAVSGGVDSTVVATLLHRAIKDNLIAVFVDHGLLRKNEKEKVQAMFKDLQIPLNTIDAKEIFLSKL
type: DOMAIN
name: NAD/GMP_synthase
description: NAD/GMP synthase

phrase: LVLDFGSQYTQLIARRLRESGIYAEIVPFFESIENIQKKAPKGLILSGGPASVYAKDAYKPSKKIFDLDLPILGICYGMQYLVDFFGGVVACTNEQEFGKAILEITQDSVIFEGVKIKSLVWMSHMDKVIELPKGFTTLAKSPNSPHCAIENAKIFGLQFHPEVIQSEEGGKILENFA
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: WGMQHFAQKEMARLKEKIANAKVLCAVSGGVDSTVVATLLHRAIKDNLIAVFVDHGLLRKNEKEKVQAMFKDLQIPLNTIDAKEIFLSKLKGVSEPELKRKIIGETFIEAFEKEAKKHHLKGKIEFLAQGTLYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEVRLLGKELGISQDFLM
type: DOMAIN
name: GMPS_ATP_PPase_dom
description: GMP synthetase ATP pyrophosphatase domain

phrase: EELKKANLYDKVWQAFCVLLNVNSVGVMGDNRTYENAICLRAVNASDGMTASFSFLEHSFLEKVSNRITNEVSGINRVVYDITSKPPGTIE
type: DOMAIN
name: GMP_synth_C
description: GMP synthase, C-terminal

phrase: LKEKIANAKVLCAVSGGVDSTVVATLLHRAIKDNLIAVFVDHGLLRKNEKEKVQAMFKDLQIPLNTIDAKEIFLSKLKGVSEPELKRKIIGETFIEAFEKEAKKHHLKGKIEFLAQGTLYPDVIESVSVKGPSKVIKTHHNVGGLPEWMDFKLIEPLRELFKDEVRLLGKELGISQDFLMRHPFPGPGLAIRILGEVSESKIRCLQEADFIFIEELKKANLYDKVWQAFCVLLNVNSVGVMGDNRTYENAICLRAVNASDGMTASFSFLEHSFLEKVSNRITNEVSGINRVVYDITSKPPGTIEW
type: DOMAIN
name: GMP_synth_C
description: GMP synthase, C-terminal

phrase: ILVLDFGSQYTQLIARRLRESGIYAEIVPFFESIENIQKKAPKGLILSGGPASVYAKDAYKPSKKIFDLDLPILGICYGMQYLVDFFGGVVACTNEQEFGKAILEITQDSVIFEGVKIKSLVWMSHMDKVIELPKGFTTLAKSPNSPHCAIENAKIFGLQFHPEVIQSEEGGKILENFALLVCGC
type: DOMAIN
name: GMP_synth_GATase
description: GMP synthase, glutamine amidotransferase

phrase: ILVLDFGSQYTQLIARRLRESGIYAEIVPFFESIENIQKKAPKGLILSGGPASVYAKDAYKPSKKIFDLDLPILGICYGMQYLVDFFGGVVACTNEQEFGKAILEITQDSVIFEGVKIKSLVWMSHMDKVIELPKGFTTLAKSPNSPHCAIENAKIFGLQFHPEVIQSEEGGKILENF
type: DOMAIN
name: GMP_synth_GATase
description: GMP synthase, glutamine amidotransferase
Protein sequence:
MDTKKEIKNNNFICQIINKDLNENKNLSFYTRFPPEPNGYLHIGHAKSICLNFELASLYKGRCNLRFDDTNPLKENIKYIKSIKYDINWLGYKWHGNVRYASEYFLKLYQYAQELIKKGLAYVDHLTKEQIREYRGTLNTPGKNSPYRNRTIQENIELFEKMKKGDFSEGEACLRAKINMSSSSIIMRDPVLYRIIFIKHHQTQNKWCIYPMYDFAHCLSDSIEGITHSLCTLEFQDNKFLYNWILKNTSVKHYPKQYEFSRLNLEFSILSKRKIKILIDKNIIEGWDDPRIPTLSALRRKGYTPSSIKNFCQKIGVTKQNNLIEFSMLEHCIRKELNQTAIRTMAILDPIKIFLYNLDSNYKEEFIVPNHPNNPEMGTHKIIFTNTIYIDRSDFKEKYDKKYKRLKLGEKIRLRYSYIIHAEKIEKDEYGNISNIICYCDLNTLGRKPKDNKNPAVIHWISEKNTLSAEFKLYDQLFNIKNPEQQENFLLYINSKSLIKKFGFIEKKIGEEIQKKISNNNIEIFFQFERIGYFCIDFIDSKKNQLVFNRTVGLRDTWDSKKIKTKNITNN

Annotated regions:
phrase: PEPNGYLHIGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: AIRTMAILDPIKIFLYNLDSNYKEEFIVPNHPNNPEMGTHKIIFTNTIYIDRSDFKEKYDKKYKRLKLGEKIRLRYSYIIHAEKIEKDEYGNISNIICY
type: DOMAIN
name: Glu/Gln-tRNA-synth_Ib_codon-bd
description: Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain

phrase: TRFPPEPNGYLHIGHAKSICLNFELASLYKGRCNLRFDDTNPLKENIKYIKSIKYDINWLGYKWHGNVRYASEYFLKLYQYAQELIKKGLAYVDHLTKEQIREYRGTLNTPGKNSPYRNRTIQENIELFEKMKKGDFSEGEACLRAKINMSSSSIIMRDPVLYRIIFIKHHQTQNKWCIYPMYDFAHCLSDSIEGITHSLCTLEFQDNKFLYNWILKNTSVKHYPKQYEFSRLNLEFSILSKRKIKILIDKNIIEGWDDPRIPTLSALRRKGYTPSSIKNFCQKIGVTKQNNLIEFSMLEHCIRKEL
type: DOMAIN
name: Glu/Gln-tRNA-synth_Ib_cat-dom
description: Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain

phrase: VIHWISEKNTLSAEFKLYDQLFNIKNPEQQENFLLYINSKSLIKKFGFIEKKIGEEIQKKISNNNIEIFFQFERIGYFCI
type: DOMAIN
name: tRNA-synt_1c_C2
description: tRNA synthetases class I (E and Q), anti-codon binding domain
Protein sequence:
MYGGDDYGNNAEYYDEYAHTGDPQLDMEYERNYYASRMPENVKYFLINFCQAIKEGTLYDIQNMYENTFPQISDHHFDKSAWPDEQEVGPIVDNDKVFLILYKELYYRHIHARIPGGPKLDQRINSFFNYCDFFNLIISSQNPVMLELPDIWLWELVDEFVYQFQNFAQYRARLTDKSQDEIQQLCVNHSNVWSILCILNVLHSLVDISNIKKQLEAISQGADPQTVAGDFGKLSFYKMLGYFSLVGLLRVHSLLGDYYQAIKVLEPIEIHKKSAYSHIPACQISTSYYVGFAYMMMRRYADAIRTFSDILLYIQRTKQLYSTRSYQNDQINKQAEQMYHLLAICLVLHPQCIDESIQQVLREKNYHDAMFKMQCGDLDVFKSFFVFACPRFVSPCPPAADAPMEDYVKDPMEHQLMVFMDEVRQQKDLPTTRSYLKLYTTLPLAKLASFIDPNASDDDVSKLLIRLLCFKHKMRNLVWSKGPSGLEGAFKSGSELDFYIDDDMIHIADTKVSHRYGDFFVRKILKFNDLNRKLKKITI

Annotated regions:
phrase: TFSDILLYIQRTKQLYSTRSYQNDQINKQAEQMYHLLAICLVLHPQCIDESIQQVLREKNYHDAMFKMQCGDLDVFKSFFVFACPRFVSPCPPAADAPMEDYVKDPMEHQLMVFMDEVRQQKDLPTTRSYLKLYTTLPLAKLASFIDPNASDDDVSKLLIRLLCFKHKMRNLVWSKGPSGLEGAFKSGSELDFYIDDDMIHIADTKVS
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain
Protein sequence:
MIHKSDSDTTVRRFDLSQQFTAMQRISVVLSRATEASKTLQEVLSVLHNDAFMQHGMICLYDSQQEILSIEALQQTENQTLPGSTQIRYRPGEGLVGTVLAQGQSLVLPRVADDQRFLDRLSLYDYDLPFIAVPLMGPHSRPIGVLAAQPMARQEERLPACTRFLETVANLIAQTIRLMILPTSAAQPPQQSPRVERPRACTSSRGFGLENMVGKSPAMRQIMDIIRQVSRWDTTVLVRGESGTGKELIANAIHHNSPRAAAAFVKFNCAALPDNLLESELFGHEKGAFTGAVRQRKGRFELADGGTLFLDEIGESSASFQAKLLRILQEGEMERVGGDETLRVNVRIIAATNRHLEEEVRLGHFREDLYYRLNVMPIALPPLRERQEDIAELAHFLVRKIAHSQGRTLRISDGAIRLLMEYSWPGNVRELENCLERSAVLSESGLIDRDVILFNHRDNPPKALASSGPAEDGWLDNSLDERQRLIAALEKAGWVQAKAARLLGMTPRQVAYRIQIMDITMPRL

Annotated regions:
phrase: WDTTVLVRGESGTGKELIANAIHHNSPRAAAAFVKFNCAALPDNLLESELFGHEKGAFTGAVRQRKGRFELADGGTLFLDEIGESSASFQAKLLRILQEGEMERVGGDETLRVNVRIIAATNRHLEEEVRLGHFREDLYYRLN
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: WPGNVRELE
type: CONSERVED_SITE
name: Sigma_54_int_dom_CS
description: Sigma-54 interaction domain, conserved site

phrase: MVGKSPAMRQIMDIIRQVSRWDTTVLVRGESGTGKELIANAIHHNSPRAAAAFVKFNCAALPDNLLESELFGHEKGAFTGAVRQRKGRFELADGGTLFLDEIGESSASFQAKLLRILQEGEMERVGGDETLRVNVRIIAATNRHLEEEVRLGHFREDLYYRLNVMPIALPPLRERQEDIAELAHFLVRKIAHSQGRTLRISDGAIRLLMEYSWPGNVRELENCLERSA
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: ERQRLIAALEKAGWVQAKAARLLGMTPRQVAYRI
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: MVGKSPAMRQIMDIIRQVSRWDTTVLVRGESGTGKELIANAIHHNSPRAAAAFVKFNCAALPDNLLESELFGHEKGAFTGAVRQRKGRFELADGGTLFLDEIGESSASFQAKLLRILQEGEMERVGGDETLRVNVRIIAATNRHLEEEVRLGHFREDLYYRLNVMP
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: GRFELADGGTLFLDE
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_2
description: Sigma-54 interaction domain, ATP-binding site 2

phrase: QRLIAALEKAGWVQAKA
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: ARLLGMTPRQVAYRIQIMDI
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: VLVRGESGTGKEL
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_1
description: Sigma-54 interaction domain, ATP-binding site 1

phrase: EASKTLQEVLSVLHNDAFMQHGMICLYDSQQEILSIEALQQTENQTLPGSTQIRYRPGEGLVGTVLAQGQSLVLPRVADDQRFLDRLSLYDYDLPFIAVPLMGPHSRPIGVLAAQPMARQEERLPACTRFLETVANLIAQTIRLMILPTSA
type: DOMAIN
name: GAF
description: GAF domain

phrase: KTLQEVLSVLHNDAFMQHGMICLYDSQQEILSIEALQQTENQTLPGSTQIRYRPGEGLVGTVLAQGQSLVLPRVADDQRFLDRLSLYDYDLPFIAVPLMGPHSRPIGVLAAQPMARQEERLPACTRFLETVANLIAQT
type: DOMAIN
name: GAF
description: GAF domain
Protein sequence:
MTGNTERLLIETTTAWGIPLSEHQYAQFQRYLDELIIWNDRFNLTAIRDRSAMIRRHLLDSLYLARDWQTAPANLIDIGSGAGFPALPLKIAYPTLPVTLVEATGKKAEFLRHVIECLELTDVRVLHERIETVGRNLAEREQYEVVTARAVAELRVLVEYALPLLRIGGRLLAPKGRDPTDEIAAAQRALHVLGGEVSACEPVHIPGEEPRSLVIITKIAPTPSRFPRAIGIPARRPL

Annotated regions:
Protein sequence:
MVGLRHLLSDLAVPDITVSNMTLDSRQVSAGDLFVALPGLHHDGRDFIEAAFTRGAVAILTETVPDALLGDDRVIPIPRLKVRLGELANRFYRAPSKKLKLIAVTGTNGKTSIVELVSQMLRSMGYRAGSIGTLGMKLVERPSEARNTTPDCVSIHRQLAKWCDASVEWVAMEASSHALDQGRLDGLSIDAAVFSNLSRDHLDYHSSMEAYCEAKLRLFRDFAPAVRIFNADDALLTSHRNAWGKAGLGISCEGALADIQVLVKGAAPLALQLKTPWGATQVQSALAGRFNAFNLSAAVTLLAAMGLPFDAVISAAEQVDPVRGRLQKVEFESDIAVFIDYAHTPDALNRALCALSDFGVKGHIWVVFGCGGDRDRGKRAEMGATAAAIADRLVVTSDNPRSESPVAIIDDILEGCRHVVPMVEVDRAEAIALAVSQADTGDVVLIAGKGHETYQEVGSVRQPFCDSDHARKNLAIRRAA

Annotated regions:
phrase: VSNMTLDSRQVSAGDLFVALPGLHHDGRDFIEAAFTRGAVAILTETVPDALLGDDRVIPIPRLKVRLGELANRF
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: GRLQKVEFESDIAVFIDYAHTPDALNRALCALSDFGVKGHIWVVFGCGGDRDRGKRAEMGATAAAIADRLVVTSDNPRSESPVAIIDDILEGCRHVVPMVEVDRAEAIALAVSQADTGDVVLIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: IAVTGTNGKTSIVELVSQMLRSM
type: CONSERVED_SITE
name: Folylpolyglutamate_synth_CS
description: Folylpolyglutamate synthetase, conserved site

phrase: VTGTNGKTSIVELVSQMLRSMGYRAGSIGTLGMKLVERPSEARNTTPDCVSIHRQLAKWCDASVEWVAMEASSHALDQGRLDGLSIDAAVFSNLSRDHLDYHSSMEAYCEAKLRLFRDFAPAVRIFNADDALLTSHRNAWGKAGLGISCEGALADIQVLVKGAAPLALQLKTPWGATQVQSALAGRFNAFNLSAAVT
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central
Protein sequence:
MTTSAQLFEQACRHIPGGVNSPVRAFKGMERAPVFVERAQGAYLYDVEGQRYIDYVGSWGPLITGHADPDVLGAVRSRLDDGLSFGTPTAIETRMAELICEIMPSIDMVRMVNSGTEATMSAIRLARGHTGRDKIVKFEGNYHGHSDSLLVKAGSGALTHGEPSSPGVPASLAEHTVTLPYNDLDAVRACFAELGDEIAGIIVEPVAGNMNCIPPQPDFLKGLREICDVHGSVLIFDEVMTGFRVALGGAQAHFGVTPDLTCLGKIVGGGMPVGAFGGTREIMEQLSPLGPIYQAGTLAGNPLAMAAGIALLEKIRQPGFHDALAERVATLCDGLEARAREAGVDLITQRAGGMFGVFFTAQQRVDNFAQATACNADTFRRFFLGMLEHGVYLAPSPFEAGFMSSAHTPDDIQATLDAAEQVLATLENA

Annotated regions:
phrase: LIFDEVMTGFRVALGGAQAHFGVTPDLTCLGKIVGG
type: CONSERVED_SITE
name: Aminotrans_3_PPA_site
description: Aminotransferases class-III pyridoxal-phosphate attachment site
Protein sequence:
MSKRIAGPEIERLIQLLAKVPGLGPRSARRAALHLIKKKEQLFSPLTTAMAEALAKVRVCSVCGNVDTSDPCTICTDPRRESATLIVVEDVSDLWALERAAALNARYHVLGGTLSPLDGVGPDDLNIKGLVSRIAEGGVSEVILAVNATVEGQATAHYITDQLVGLEVRVTKLAHGVPVGGELDYLDEGTLAAALKSRTAF

Annotated regions:
phrase: ATLIVVEDVSDLWALERAAALNARYHVLGGTLSPLDGVGPDDLNIKGLVSRIAEGGVSEVILAVNATVEGQATAHYITDQLVGLE
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: ATLIVVEDVSDLWALERAAALNARYHVLGGTLSPLDGVGPDDLNIKGLVSRIAEGGVSEVILAVNATVEGQATAHYITDQLVGLEVRVTKLAHGV
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: VRVCSVCGNVDTSDPCTICT
type: DOMAIN
name: Rcmb_RecR_Znf
description: Recombination protein RecR, zinc finger domain

phrase: TLIVVEDVSDLWALERAAALNARYHVLGGTLSPLDGVGPDDLNIKGLVSRIAEGGVSEVILAVNATVEGQATAHYITDQLVGLEVRVTKLAHGVPVGGELDYLDEGTLAA
type: DOMAIN
name: TOPRIM_RecR
description: RecR, TOPRIM domain

phrase: TLIVVEDVSDLWALERAAALNARYHVLGGTLSPLDGVGPDDLNIKGLVSRIAEGGVSEVILAVNATVEGQATAHYITDQLVGLEVRVTKL
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain
Protein sequence:
MNEPTRIPKYVKDKIRQAKQGDLYSSFTVSEYYYDGEVLERDIEQSELYLRNVSRIINNAKIRLRNISLYDYKKFSKLKFTSSEKNTTIIIGNNGSGKSTILESISKCLQFLSDNIRIQNNNNYKFQDSEINIHSISGQTIVRCILEIENDFSFSCSLTKNRENISRKVSSELEEFKALARMYQRSNELDNNTLSYPLLAYYPVERSVTLKRDDAVKYYERKKAKYSDKSEGLKNAFDGTSNFNDFFSWYKEIDDIINEFKANDSITKEEIEYLLSKTDNKEKIGSLISQLLEKKNNYNNNEDREFLIRQQKVIQESIKTFVSDIDQVKISRTPHLDMTVIKNGSEISIFNLSQGEKTLIALVSDIARRLVILNPSLENPLNGYGIVLIDEIDLHLHPKWQQTIVQKLENTFPNIQFILSTHSPLVLTTVTSEQIKIINELDYRFKLLSPTSNPFGKNASDALAIMETSESPLVHSEEILALIKKYESLVKRGQEDCRKTKEIKKTHRKHWIYI

Annotated regions:
phrase: EKNTTIIIGNNGSGKSTILESISKCLQFLSDNIRIQNNNNYKFQDSEINIHSISGQTIVRCILEIENDFSFSCSLTKNRENISRKVSSELEEFKALARMYQRSNELDNNTLSYPLLAYYPVERSVTLKRDDAVKYYERKKAKYSDKSEGLKNAFDGTSNFNDFFSWYKEIDDIINEFKANDSITKEEIEYLLSKTDNKEKIGSLISQLLEKKNNYNNNEDREFLIRQQKVIQESIKTFVSDIDQVKISRTPHLDMTVIKNGSEISIFNLSQGEKTLIALVSDIARRLVILNPSLENPLNGYGIVLIDEIDLHLHPKWQQTIVQKLENTFPNIQFILSTHSPLVLTTVTSEQIKIINE
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: TIIIGNNGSGKSTILESISKCLQFLSDNIRIQNNNNYKFQDSEINIHSISGQTIVRCILEIENDFSFSCSLTKNRENISRKVSSELEEFKALARMYQRSNELDNNTLSYPLLAYYPVERSVTLKRDDAVKYYERKKAKYSDKSEGLKNAFDGTSNFNDFFSWYKEIDDIINEFKANDSITKEEIEYLLSKTDNKEKIGSLISQLLEKKNNYNNNEDREFLIRQQKVIQESIKTFVSDIDQVKISRTPHLDMTVIKNGSEISIFNLSQGEKTLIALVSDIARRLVILNPSLENPLNGYGIVLIDEIDLHLHPKWQQTIVQKLENTFPNIQFILSTHSPLV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core
Protein sequence:
MSIMLASCIALVSSLVLTVIFLPVLINFMHSHHEGQEIRDEGPKWHQKKSGTPTMGGTIFVIAAVISVIWVAAWQHSLNKVVWILVISLLGYGIIGFLDDGIKLYYKRNLGLRAWQKLALQIIIAVVIVLIASSDHFQFGLYIPFAGVVHSIALFTIFIIFWLVGFSNAVNLSDGLDGLATGLSIVAYGTYAYIAFKQKNFAVLAFCMSVIGGLIAFFIFNHKPAKIFMGDAGSLALGGGLATVSIMLNRPWSLLLIGIVFVCETASVILQVISFQTTGKRIFKMTPIHHHFEMLGWSEWKVDIVFWLVGLICSILYLAIWG

Annotated regions:
phrase: NAVNLSDGLDG
type: CONSERVED_SITE
name: PNAcMuramoyl-5peptid_Trfase_CS
description: Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site

phrase: KSGTPTMGGTIF
type: CONSERVED_SITE
name: PNAcMuramoyl-5peptid_Trfase_CS
description: Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site
Protein sequence:
MRAAILSIGDELLLGEVVDTNASTIAARLYNLGVNLPLQMTVGDNIQDIVEACQLLAGKSDTVIVTGGLGPTVDDVTALAAAKLAGSPLEPNREALAHLKDFAERVAEKLHPANDKQSLMPASAKVIPNLVGTACGFSLVHDGCRFFFLPGVPGEMVSMLDETVLPALASSGRHKILRSKVFKVSGISEAELDAMLQGVTEGFAAASIAFCVNFPEIEVKIRVVADEKLTADKIIAIVGDKTRNILGSRVFAEDGETIDTVVAGLFKKTGATLSLAESCTGGLIAKRITDLSGSSAYFLEGLVTYSNRAKIDLLGVPAQLLEEKGAVSAEVAMAMARGAREKSGSDLALAVTGIAGPEGGSAEKPVGTVFMALAGQEQCRVRLFNFHGDREQVRLVTSFAALNWLRRELLARP

Annotated regions:
phrase: SKVFKVSGISEAELDAMLQGVTEGFAAASIAFCVNFPEIEVKIRVVADEKLTADKIIAIVGDKTRNILGSRVF
type: DOMAIN
name: CinA_KH
description: CinA, KH domain

phrase: LFKKTGATLSLAESCTGGLIAKRITDLSGSSAYFLEGLVTYSNRAKIDLLGVPAQLLEEKGAVSAEVAMAMARGAREKSGSDLALAVTGIAGPEGGSAEKPVGTVFMALAGQEQCRVRLFNFHGDREQVRLVTSFAALNWLRRE
type: DOMAIN
name: CinA_C
description: CinA, C-terminal

phrase: RAAILSIGDELLLGEVVDTNASTIAARLYNLGVNLPLQMTVGDNIQDIVEACQLLAGKSDTVIVTGGLGPTVDDVTALAAAKLAGSPLEPNREALAHLKDFAERVAEKLHPANDKQSLMPASAKVIPNLVGTACGFSLVHDGCRFFFLPGVPGEMVSMLDETVLPALA
type: DOMAIN
name: MoaB/Mog_dom
description: MoaB/Mog domain

phrase: AILSIGDELLLGEVVDTNASTIAARLYNLGVNLPLQMTVGDNIQDIVEACQLLAGKSDTVIVTGGLGPTVDDVTALAAAKLAGSPLEPNREALAHLKDFAERVAEKLHPANDKQSLMPASAKVIPNLVGTACGFSLVHDGCRFFFLPGVPGEMVSMLDETVLPAL
type: DOMAIN
name: MoaB/Mog_dom
description: MoaB/Mog domain

phrase: AILSIGDELLLGEVVDTNASTIAARLYNLGVNLPLQMTVGDNIQDIVEACQLLAGKSDTVIVTGGLGPTVDDVTALAAAKLAGSPLEPNREALAHLKDFAERVAEKLHPANDKQSLMPASAKVIPNLVGTACGFSLVHDGCRFFFLPGVPGEMVSMLDETVLPALAS
type: DOMAIN
name: MoaB/Mog_dom
description: MoaB/Mog domain

phrase: TIDTVVAGLFKKTGATLSLAESCTGGLIAKRITDLSGSSAYFLEGLVTYSNRAKIDLLGVPAQLLEEKGAVSAEVAMAMARGAREKSGSDLALAVTGIAGPEGGSAEKPVGTVFMALAGQEQCRVRLFNFHGDREQVRLVTSFAALNWLRR
type: DOMAIN
name: CinA_C
description: CinA, C-terminal