nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MAAVSVIELLRQQISTCEAQLASLRQQLAEAEHLHRQQQQGLQLKRMEEQTRHNTASTSLVHDMSYGIHDDFRSEIFAALSHPEEENVPPRRWPLENSEYKRYGRQLIMPEIGLQGQLRLKQASVLIVGVGGLGCPAAAYLVGAGVGTVGLIDGDVVEESNLHRQILHSTARVGMTKVDSAIVALSSLNPNVNLVAHPARLTPESSLSIMQDYDLVLDCTDNPASRYLISDTCVLLGKPLVSASALRTEGQLMVLNNPPLPPGGANGGPCYRCIFPKPPAFETVVSCGEGGILGPVVGTMGVLQALETIKVLSRGVKGLAANGTTSPEPPTLTMFSAYGSPMFRTIRLRGRRQTCASCGAKATVTPEALKSGSLDYALFCGSVAPVDALTANERISVDNYAKIRTEANPFTGSQPSNDSHILIDVREGVQFDLCSLEGSVNIPFSEISRTPLKPMREDVAGNHDATPEEGWVAALRSHPEKPIFVICRLGNDSQLTVKKMKALGLDNGGKRWIGDIKGGLRAWRENVDQDFPDY

Annotated regions:
phrase: DSHILIDVREGVQFDLCSLEGSVNIPFSEISRTPLKPMREDVAGNHDATPEEGWVAALRSHPEKPIFVICRLGNDSQLTVKKMKALGLDNGGKRWIGDIKGGLRAWR
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain

phrase: SNDSHILIDVREGVQFDLCSLEGSVNIPFSEISRTPLKPMREDVAGNHDATPEEGWVAALRSHPEKPIFVICRLGNDSQLTVKKMKALGLDNGGKRWIGDIKGGLRAWRENVDQDF
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain

phrase: ANPFTGSQPSNDSHILIDVREGVQFDLCSLEGSVNIPFSEISRTPLKPMREDVAGNHDATPEEGWVAALRSHPEKPIFVICRLGNDSQLTVKKMKALGLDNGGKRWIGDIKGGLRAWRENVD
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain

phrase: YGRQLIMPEIGLQGQLRLKQASVLIVGVGGLGCPAAAYLVGAGVGTVGLIDGDVVEESNLHRQILHSTARVGMTKVDSAIVALSSLNPNVNLVAHPARLTPESSLSIMQDYDLVLDCTDNPASRYLISDTCVLLGKPLVSASALRTEGQLMVLNNPPLPPGGANGGPCYRCIFPKPPAFETVVSCGEGGILGPVVGTMGVLQALETIKVLSRGVKGLAANGTTSPEPPTLTMFSAYGSPMFRTIRLRGRRQT
type: DOMAIN
name: ThiF_NAD_FAD-bd
description: THIF-type NAD/FAD binding fold
Protein sequence:
MSTENTTRQAETGAAYDATAKQKAQAKTARIPIKVVPAETLKKPDWIRVKAGSPTTRFYEIKNILREHQLHTVCEEASCPNIGECFGKGTATFMIMGDKCTRRCPFCDVGHGRPDPLDVNEPANLAKTIAALKLKYVVITSVDRDDLRDGGAGHYVECIRQTRAASPETRIEVLVPDFRGRMDRALEILKTAPPDVMNHNMETVPRLYKEARPGADYQFSLTLLKRFKEEVPGVPTKSGLMVGLGETDDEILDVMRDMRAHDIDMLTIGQYLAPSGHHLPVRRYVHPDTFRMFETEAYKMGFTHAAVGAMVRSSYHADQQAHQAGVDGAIG

Annotated regions:
phrase: MIMGDKCTRRCPFCDVGHGRPDPLDVNEPANLAKTIAALKLKYVVITSVDRDDLRDGGAGHYVECIRQTRAASPETRIEVLVPDFRGRMDRALEILKTAPPDVMNHNMETVPRLYKEARPGADYQFSLTLLKRFKEEVPGVPTKSGLMVGLGETDDEILDVMR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TATFMIMGDKCTRRCPFCDVGHGRPDPLDVNEPANLAKTIAALKLKYVVITSVDRDDLRDGGAGHYVECIRQTRAASPETRIEVLVPDFRGRMDRALEILKTAPPDVMNHNMETVPRLYKEARPGADYQFSLTLLKRFKEEVPGVPTKSGLMVGLGETDDEILDVMRDMRAHDIDMLTIGQYLAPSGHHLPVRRYVHPDTFRMFETEA
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: IKVVPAETLKKPDWIRVKAGSPTTRFYEIKNILREHQLHTVCEEAS
type: DOMAIN
name: LIAS_N
description: Lipoyl synthase, N-terminal

phrase: CFGKGTATFMIMGDKCTRRCPFCDVGHGRPDPLDVNEPANLAKTIAALKLKYVVITSVDRDDLRDGGAGHYVECIRQTRAASPETRIEVLVPDFRGRMDRALEILKTAPPDVMNHNMETVPRLYKEARPGADYQFSLTLLKRFKEEVPGVPTKSGLMVGLGETDDEILDVMRDMRAHDIDMLTIGQYLAPSGHHLPVRRYVHPDTFRMFETEAYKMGF
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MAQQKRVLVLVPAAGLGRRMGGQVRKPYLQLQGLPVLVRTLRLFQCHPLVDEILVLVAADQVAHCRRDIVEAYGLTKVRTVLAGGAERQESVHLGLEALTAADEDIVVIHDGVRPLFAAEQLETLLAVARRDGACLLGVPVTDTIKEVADGRSVATPPRARLWAAQTPQLFRYGRILAAHRQAAQRGYQATDDAALLEWLGQPVTLVAGAAGNLKLTRPEDLALADFLLRSADHSAQAAGEEEIEVTPFRIGQGYDVHRLVPGRPLVLGGLTIPHEVGLLGHSDADVLLHALCDALLGAIGAGDLGRHFPDTDPAYKGIASSELLRQVLQLVARRGYRVGNIDATIVAQRPRLAGYIPQMVAQLAACCAIMPEQVNIKATTTETLGFEGRQEGISAQAVVLLISHNGTPSS

Annotated regions:
phrase: VVIHDGV
type: CONSERVED_SITE
name: ISPD_synthase_CS
description: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site

phrase: SDADVLLHALCDALL
type: CONSERVED_SITE
name: MECDP_synthase_CS
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site

phrase: QAAGEEEIEVTPFRIGQGYDVHRLVPGRPLVLGGLTIPHEVGLLGHSDADVLLHALCDALLGAIGAGDLGRHFPDTDPAYKGIASSELLRQVLQLVARRGYRVGNIDATIVAQRPRLAGYIPQMVAQLAACCAIMPEQVNIKATTTETLGFEGRQEGISAQAVVLL
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: FRIGQGYDVHRLVPGRPLVLGGLTIPHEVGLLGHSDADVLLHALCDALLGAIGAGDLGRHFPDTDPAYKGIASSELLRQVLQLVARRGYRVGNIDATIVAQRPRLAGYIPQMVAQLAACCAIMPEQVNIKATTTETLGFEGRQEGISAQAVVLLI
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: FRIGQGYDVHRLVPGRPLVLGGLTIPHEVGLLGHSDADVLLHALCDALLGAIGAGDLGRHFPDTDPAYKGIASSELLRQVLQLVARRGYRVGNIDATIVAQRPRLAGYIPQMVAQLAACCAIMPEQVNIKATTTETLGFEGRQEGISAQAVVL
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RIGQGYDVHRLVPGRPLVLGGLTIPHEVGLLGHSDADVLLHALCDALLGAIGAGDLGRHFPDTDPAYKGIASSELLRQVLQLVARRGYRVGNIDATIVAQRPRLAGYIPQMVAQLAACCAIMPEQVNIKATTTETLGFEGRQEGISAQAVVL
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RIGQGYDVHRLVPGRPLVLGGLTIPHEVGLLGHSDADVLLHALCDALLGAIGAGDLGRHFPDTDPAYKGIASSELLRQVLQLVARRGYRVGNIDATIVAQRPRLAGYIPQMVAQLAACCAIMPEQVNIKATTTETLGFEGRQEGISAQAVVLL
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Protein sequence:
MEYIPLFFDLKDRSILLVGGGEVALRKARLLTRAGAKVEVVALAVDPELSELVVASGGSVEVGEYHPVQLKGKVLVVAATDNDMLNRRISVDAKNASVQVNVVDSPELCTFIFPAIVDRSPIVIGISSAGKAPVLARNLRAKLETLIPQSYSQLGTLVGRFRKQVQAKFSHINGRRAFWESVFEGPVAEKVYAGQLDEAERLLAQQIEQSDGQQPTGEVYLVGAGPGDPELLTFKALRLMQQADVVLYDALVSAEVLDLCRRDADLIFVGKRRSNHALAQEDINQLLVDLAKQGKRVVRLKGGDPFIFGRGGEELETLHEQGVPFQVVPGITAASACSSYAGIPLTHRDYAQSVRFVTGQLKSRKNALDFNELAVENQTLVFYMGLHTLPDIVSGLVGAGKDSATPIAIVSKGTCKDQQVLTGTLANIVERQNLAQLPGPALLIVGEVVKLQEKLAWFGEQAAVELPEYIEAVA

Annotated regions:
phrase: VGAGPGDPELLTFKALRLMQQADVVLYDALVSAEVLDLCRRDADLIFVGKRRSNHALAQEDINQLLVDLAKQGKRVVRLKGGDPFIFGRGGEELETLHEQGVPFQVVPGITAASACSSYAGIPLTHRDYAQSVRFVTGQLKSRKNALDFNELAVENQTLVFYMGLHTLPDIVSGLVGAGKDSATPIAIVSKGTCKDQQVLTGTLANIVERQNLAQLPGPALLIVGEV
type: DOMAIN
name: CobA/CysG_C
description: Uroporphyrin-III C-methyltransferase

phrase: SYSQLGTLVGRFRKQVQAKFSHINGRRAFWESVFEGPVAEKVYAGQLDEAERLLAQQ
type: DOMAIN
name: Sirohaem_synthase_dimer_dom
description: Sirohaem synthase, dimerisation domain

phrase: GEVYLVGAGPGDPELLTFKALRLMQQADVVLYDALVSAEVLDLCRRDADLIFVGKRRSNHALAQEDINQLLVDLAKQGKRVVRLKGGDPFIFGRGGEELETLHEQGVPFQVVPGITAASACSSYAGIPLTHRDYAQSVRFVTGQLKSRKNALDFNELAVENQTLVFYMGLHTLPDIVSGLVGAGKDSATPIAIVSKGTCKDQQVLTGTLANIVERQNLAQLPGPALLIVGEVVKL
type: DOMAIN
name: CobA/CysG_C
description: Uroporphyrin-III C-methyltransferase

phrase: VYLVGAGPGDPELLTFKALRLMQQADVVLYDALVSAEVLDLCRRDADLIFVGKRRSNHALAQEDINQLLVDLAKQGKRVVRLKGGDPFIFGRGGEELETLHEQGVPFQVVPGITAASACSSYAGIPLTHRDYAQSVRFVTGQLKSRKNALDFNELAVENQTLVFYMGLHTLPDIVSGLVGAGKDSATPIAIVSKGTCKDQQVLTGTLAN
type: DOMAIN
name: 4pyrrol_Mease
description: Tetrapyrrole methylase

phrase: IPLFFDLKDRSILLVGGGEVALRKARLLTRAGAKVEVVALAVDPELSELVVASGGSVEVGEYHPVQLKGKVLVVAATDNDMLNRRISVDAKNASVQVNVVDSPELCTFIFPAIVDRSPIVIGISSAGKAPVLARNLRAKLETLIPQSYSQLGTLVGRFRKQVQAKFSHINGRRAFWESVFEGPVAEKVYAGQLDEAERLLAQQ
type: DOMAIN
name: Sirohaem_synthase_N
description: Sirohaem synthase, N-terminal

phrase: VVRLKGGDPFIFGRGGEELETLHEQGVPFQVVP
type: CONSERVED_SITE
name: Uropor_MeTrfase_CS
description: Uroporphiryn-III C-methyltransferase, conserved site
Protein sequence:
MNSECLAIINRFGGLKVLVIGDAMLDVYMDGSANRICREAPVPIVDIKEVKAMPGGAANTAVNLAELGAEVHYLSAVGCDREAELLKDTLTGHGLDISLIICDQARRTITKQRVTAGSQLLVRFDSGTTDAVCGEYEQQIIEALKEKFHEVDAVVVSDYGYGIMTDKVIDALGALQGKRENILVIDAKSLDKYSCVGATVAKPNYQELVTLLAITEPAAIGHRSEQIKLHGQKLLKKTGTKYVAATIDIEGALLFQHGKEPYRTFSKPVENTKAAGAGDTYVSALTLALAGGASIEVAGEIAKSAAVVILQKSGTATCTHNELSQYLGSSSKYIRDWQELKSHVDTFKKEGKRIVFTNGCFDLLHSGHVTYLEQARALGDVLVLGLNSDASIKRLKGSARPINNLYERLRILSGLEAVTLITSFEEDTPINLLDIIQPDVYVKGGDYTIGNLPEAPIVLGYGGKVEIMPFVQDRSTTNIITRIKNLDKQLV

Annotated regions:
phrase: KVLVIGDAMLDVYMDGSANRICREAPVPIVDIKEVKAMPGGAANTAVNLAELGAEVHYLSAVGCDREAELLKDTLTGHGLDISLIICDQARRTITKQRVTAGSQLLVRFDSGTTDAVCGEYEQQIIEALKEKFHEVDAVVVSDYGYGIMTDKVIDALGALQGKRENILVIDAKSLDKYSCVGATVAKPNYQELVTLLAITEPAAIGHRSEQIKLHGQKLLKKTGTKYVAATIDIEGALLFQHGKEPYRTFSKPVENTKAAGAGDTYVSALTLALAGGASIEVAGEIAKSAAVVILQKSGTATCT
type: DOMAIN
name: PfkB_dom
description: Carbohydrate kinase PfkB

phrase: IVFTNGCFDLLHSGHVTYLEQARALGDVLVLGLNSDASIKRLKGSARPINNLYERLRILSG
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: FTNGCFDLLHSGHVTYLEQARALGDVLVLGLNSDASIKRLKGSARPINNLYERLRILSGLEAVTLITSFEEDTPINLLDIIQPDVYVKGGDYT
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: KVLVIGDAMLDVYMDGSANRICREAPVPIVDIKEVKAMPGGAANTAVNLAELGAEVHYLSAVGCDREAELLKDTLTGHGLDISLIICDQARRTITKQRVTAGSQLLVRFDSGTTDAVCGEYEQQIIEALKEKFHEVDAVVVSDYGYGIMTDKVIDALGALQGKRENILVIDAKSLDKYSCVGATVAKPNYQELVTLLAITEPAAIGHRSEQIKLHGQKLLKKTGTKYVAATIDIEGALLFQHGKEPYRTFSKPVENTKAAGAGDTYVSALTLALAGGASIEVAGEIAKSAAVVILQKSGTATCTHNE
type: DOMAIN
name: RfaE_dom_I
description: RfaE bifunctional protein, domain I

phrase: GGAANTAVNLAELGAEVHYLSAV
type: CONSERVED_SITE
name: Carboh/pur_kinase_PfkB_CS
description: Carbohydrate/purine kinase, PfkB, conserved site

phrase: VDTFKKEGKRIVFTNGCFDLLHSGHVTYLEQARALGDVLVLGLNSDASIKRLKGSARPINNLYERLRILSGLEAVTLITSFEEDTPINLLDIIQPDVYVKGGDYTIGNLPEAPIVLGYGGKVEIMPFVQDRSTTNIITRI
type: DOMAIN
name: RfaE_dom_II
description: RfaE bifunctional protein, domain II
Protein sequence:
MAMITDIYAREIMDSRGNPTVEVEVYLEDGSMGRADVPSGASTGAYEAVELRDGDKSRYLGKGVLKAVENVNEIIAPELIGMDALDQVGIDMAMIQLDGTPNKGKLGANAILGVSMAVARAAAESLGVPLYNYLGGFNARMLPVPMMNILNGGKHADNTVDIQEFMVMPVGATSFKEALRTGAEIFHSLKKVLGEKGLSTAVGDEGGFAPNLKSNEEAITTILDAIKAAGYEPGKDVFLALDVAATEMFKDGKYHFEGEGVVKTTEEMIAFYEDLVNKYPIISIEDGLSEDDWDGWKALTDKLGSKVQLVGDDLFVTNTERLARGIETSTGNSILVKVNQIGTLTETFEAIEMAKLAGYTAVISHRSGETEDSTISDIAVATNAGQIKTGAPSRTDRVAKYNQLLRIEDELADTARFGGRSAFYNLKK

Annotated regions:
phrase: ITDIYAREIMDSRGNPTVEVEVYLEDGSMGRADVPSGASTGAYEAVELRDGDKSRYLGKGVLKAVENVNEIIAPELIGMDALDQVGIDMAMIQLDGTPNKGKLGANAILGVSMAVARAAAESLGVPLYNY
type: DOMAIN
name: Enolase_N
description: Enolase, N-terminal

phrase: ILVKVNQIGTLTE
type: CONSERVED_SITE
name: Enolase_CS
description: Enolase, conserved site

phrase: ITDIYAREIMDSRGNPTVEVEVYLEDGSMGRADVPSGASTGAYEAVELRDGDKSRYLGKGVLKAVENVNEIIAPELIGMDALDQVGIDMAMIQLDGTPNKGKLGANAILGVSMAVARAAAESLGVPLYNY
type: DOMAIN
name: Enolase_N
description: Enolase, N-terminal

phrase: MLPVPMMNILNGGKHADNTVDIQEFMVMPVGATSFKEALRTGAEIFHSLKKVLGEKGLSTAVGDEGGFAPNLKSNEEAITTILDAIKAAGYEPGKDVFLALDVAATEMFKDGKYHFEGEGVVKTTEEMIAFYEDLVNKYPIISIEDGLSEDDWDGWKALTDKLGSKVQLVGDDLFVTNTERLARGIETSTGNSILVKVNQIGTLTETFEAIEMAKLAGYTAVISHRSGETEDSTISDIAVATNAGQIKTGAPSRTDRVAKYNQLLRIEDELADTARFGGRSAF
type: DOMAIN
name: Enolase_C
description: Enolase, C-terminal TIM barrel domain

phrase: ARMLPVPMMNILNGGKHADNTVDIQEFMVMPVGATSFKEALRTGAEIFHSLKKVLGEKGLSTAVGDEGGFAPNLKSNEEAITTILDAIKAAGYEPGKDVFLALDVAATEMFKDGKYHFEGEGVVKTTEEMIAFYEDLVNKYPIISIEDGLSEDDWDGWKALTDKLGSKVQLVGDDLFVTNTERLARGIETSTGNSILVKVNQIGTLTETFEAIEMAKLAGYTAVISHRSGETEDSTISDIAVATNAGQIKTGAPSRTDRVAKYNQLLRIEDELADTARFGGRSAFY
type: DOMAIN
name: Enolase_C
description: Enolase, C-terminal TIM barrel domain
Protein sequence:
MELYTVGKIVNTHGIRGEVKVVATTDFVDQRFADGATLYLVKKDQAPVELTVEHARMHKGLVLVKFKQFNNINEVQHFRDAELKVADQDQAELEEGQYYYHQIIGLTAETVDGRVLGKIKEILAPGANDVWVVDRKQKTDLLLPVIDDVVKEVDLAGGKVIVELLEGLE

Annotated regions:
phrase: HQIIGLTAETVDGRVLGKIKEILAPGANDVWVVDRKQKTDLLLPVIDDVVKEVDLAGGKVIVELLEG
type: DOMAIN
name: PRC_RimM
description: Ribosome maturation factor RimM, PRC barrel domain

phrase: TVGKIVNTHGIRGEVKVVATTDFVDQRFADGATLYLVKKDQAPVELTVEHARMHKGLVLVKFKQFNNINEVQHFRDAELKVAD
type: DOMAIN
name: RimM_N
description: RimM, N-terminal
Protein sequence:
MANSTGKPTSSTQEDEEVTYILAQLMQDVMDREEDIDDEDDIDDEVASLPLLLVSQANQKQSRKREEKTEKNQPKRVKNQNIMKINIHDFSEETLRLIEDWYNAELDPQDIFGDDEVTRRFSRPIKKQLMSSDVDTDQSRLMLSKEQVKEKMLPFLEESEDPVKGVDVSVYGPDGEVQQMKFKMWNGDKTPVLTSGWMQFVADYGLLKTSDFVTDGKVSQLEHVFIRGSKVRCCNTS

Annotated regions:
phrase: IKKQLMSSDVDTDQSRLMLSKEQVKEKMLPFLEESEDPVKGVDVSVYGPDGEVQQMKFKMWNGDKTPVLTSGWMQFVADYGLLKTSDFV
type: DOMAIN
name: B3_DNA-bd
description: B3 DNA binding domain

phrase: IKKQLMSSDVDTDQSRLMLSKEQVKEKMLPFLEESEDPVKGVDVSVYGPDGEVQQMKFKMWNGDKTPVLTSGWMQFVADYGLLKTSDFVTDGKVSQLEHVFIRGS
type: DOMAIN
name: B3_DNA-bd
description: B3 DNA binding domain
Protein sequence:
MSLLQDIVVIITGSASGIGLATATAALSQGARILGVDVSSAPVSLNEHPNYKFMQGDLTHETTPRQVVETCIKEFGGRIDGLLNIAGIMDQNSSVDSLSDYMWERCIAVNLTAPVKLMREVIPIMRQQQSGSIVNVGSKAATSGASSGVAYTASKHGLMGATKNVAWRYKQEGIRCNAVCPGGVPTGIVQASDPSTWDKDALGTMSLIHQAHAADRQKGLGVEAEDIADCLLFLISSQSKRINGAIIPIDNAWSVI

Annotated regions:
Protein sequence:
MKKKSFLSGVTEAELKEFLEREGEASYRASQIFNWIYHKCVINPDEMKNIPKNLREKIKENFICNSSSVEAKESASDGTEKLLIRLSDGEAVEAVIIPSPDRVTFCLSTQVGCPVQCRFCASGRDGLIRNMTAGEISEEFFIACAQIQRLPDNLVFMGIGEGLMNFAHLSRALEIISSQEYVGLSGRRITVSTSGWPQGIRKLADLERPFNLAVSLHAANDQTRARLIPDKFRRPIKDIIDACMYFKEKTGRIFTFEYTLIKGINDSMEDAIKLAEIARNCGAKVNLIPYNDVGISFYARPSKETLLNFENTLKQRGAKVTLRIEKGSSVKAACGQLRAKGIPRN

Annotated regions:
phrase: SPDRVTFCLSTQVGCPVQCRFCASGRDGLIRNMTAGEISEEFFIACAQIQRLPDNLVFMGIGEGLMNFAHLSRALEIISSQEYVGLSGRRITVSTSGWPQGIRKLADLERPFNLAVSLHAANDQTRARLIPDKFRRPIKDIIDACMYFKEKTGRIFTFEYTLIKGINDSMEDAIKLAEIARNCGAKVNLIPYNDVGISFYARPSKETLLNFENTLKQRGAKVTLRIEKGSSV
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LSGVTEAELKEFLEREGEASYRASQIFNWIYHKCVINPDEMKNIPKNLREKIKEN
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: STQVGCPVQCRFCASGRDGLIRNMTAGEISEEFFIACAQIQRLPDNLVFMGIGEGLMNFAHLSRALEIISSQEYVGLSGRRITVSTSGWPQGIRKLADLERPFNLAVSLHAANDQTRARLIPDKFRRPIKDIIDACMYFKEKTGRIFTFEYTLIKGINDSMEDAIK
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MTGPLTLVGRESQALELDTNDPLPTRRDEFHLPPHAGGTAAYFAGNSLGLQPKALRARLGEELDDWARLGVEGHLEARRPWLPYHELAREPAARLVGALPREVVVMNSLTVNLHLLMVSFYRPTPDRHRIVIEDSAFPSDSYAVRSQAAFHGYDPDEAVVRLAPRPGEAALRSEDVVACLAEQGAGVALVLLGAVNYYSGELLDVAAISAAAHAAGAVAGWDLAHAAGNVELRLHDAGADWAAWCSYKYLNAGPGSLAGAFVHERHLADRSLPKLAGWWSTDPASRFQMAPTVTPVDSADSWQLSNPPILALAPVLLSLEMFDQTGLPALRAKSVRLTAYLESLLDEVCASRSVEIITPREPERRGAQLSVRVHGHDVGPLTERLRHDHGVLADARRPDVIRLAPAPLYCTFHDCWRAAGALAAVLDA

Annotated regions:
Protein sequence:
MVVPQWKHRAAVWVGRIVVAASVWSFIAIPLHLFAPAYVKRVDQAFDFFGIPAGHTFFSAVYLAVVGSALLRGKRAALLWVLWVFQALWLIAQTAAVAFTSVRLANPNDAELLSDLGPATVKDLELGIVQVIVVAAIIVLLWTIRGAFPARLAPGTRRLAVSALLLGLFISAAVSITLTQIFPKSLTGQREKIGWAVIAALGQSRSRMGGHEGHGWIGLSVGAISAASLVIAFAIFLRSVRRVRYLTQSEEFDVRRLLLLHGERDSLGYFATRRDKAVIFSPAKDAAIAYRVVNGVSLASGDPLGDPAAWPGAIKVWLAEARTYGWSPAVLSASEEAAHAYVDAGLRALSMGDEAIIDVADFTLEGRTMRPVRQAVTRVQRTGYHAEVVRHGDLSPEILSEYVHLAEQWRGAQTERGFSMALGRLGDPADARCVMVIARDAEGTVRGLLSFAPWGVRGVSLDLMRRDPESVNGLMEFMVTSLVDACGDLGLHRISLNFAMFREIFSDAERVGAGPVLRLTNALLTAASRFWQLESLYQSNEKYLPRWSPRLICYSRGASLAQVLLAAGTAEGFLPAPRPWTRVDSVETAERHAIMAADGGAFATAVRAQEEELLRPALPDRKLTEQELIRRTKLDELVAAGIDPYPVSVPRTETLERIRELHPNLPADHHTGVTVSVTGRVTRMRNHGGLAFAQLQDGLSQLQAMLTADACGEVALDHWRRLVDIGDHVSVTGEIVTSRRGELSIAATSWLMAAKCLHPLPDKRKGLT

Annotated regions:
phrase: VSVTGRVTRMRNHGGLAFAQLQDGLSQLQAMLTADACGEVALDHWRRLVDIGDHVSVTGEIVTSRRGELSIAATS
type: DOMAIN
name: NA-bd_OB_tRNA
description: OB-fold nucleic acid binding domain, AA-tRNA synthetase-type

phrase: HRAAVWVGRIVVAASVWSFIAIPLHLFAPAYVKRVDQAFDFFGIPAGHTFFSAVYLAVVGSALLRGKRAALLWVLWVFQALWLIAQTAAVAFTSVRLANPNDAELLSDLGPATVKDLELGIVQVIVVAAIIVLLWTIRGAFPARLAPGTRRLAVSALLLGLFISAAVSITLTQIFPKSLTGQREKIGWAVIAALGQSRSRMGGHEGHGWIGLSVGAISAASLVIAFA
type: DOMAIN
name: tRNA-synt_2_TM
description: Lysyl-tRNA synthetase, N-terminal transmembrane region

phrase: TVSVTGRVTRMRNHGGLAFAQLQDGLSQLQAMLTADACGEVALDHWRRLVDIGDHVSVTGEIVTSRRGELSIAATSWLMAAKCLHPLPDKRKGL
type: DOMAIN
name: Lys-tRNA-ligase_II_N
description: Lysine-tRNA ligase, class II, N-terminal

phrase: RRLLLLHGERDSLGYFATRRDKAVIFSPAKDAAIAYRVVNGVSLASGDPLGDPAAWPGAIKVWLAEARTYGWSPAVLSASEEAAHAYVDAGLRALSMGDEAIIDVADFTLEGRTMRPVRQAVTRVQRTGYHAEVVRHGDLSPEILSEYVHLAEQWRGAQTERGFSMALGRLGDPADARCVMVIARDAEGTVRGLLSFAPWGVRGVSLDLMRRDPESVNGLMEFMVTSLVDACGDLGLHRISLNFAMFREIFSDAERVGAGPVLRLTNALLTAASRFWQLESLYQSNEKYLPRWSPRLIC
type: DOMAIN
name: LPG_synthase_C
description: Phosphatidylglycerol lysyltransferase, C-terminal
Protein sequence:
MRVKETQRNWHNLWRWGLMIFGMLMICNAEKMWVTVYYGVPVWRDADTILFCASDARTYSTEKHNVWATHSCVPTDPNPRELSLENVTENFNMWKNNMVEQMHEDVISLWDESLKPCVKLTPLCVALNCTDARDNATDIKNCTFNITTELEDKKKNERALFYRLDVVPINDSSSNIGQYRLINCNVSAVKQACSKVTFEPIPIHYCAPAGFAILKCRDKEFNGTGPCKNVSTVQCTHGIKPVVSTQLLLNGSLAEGEVRIRSENLTNNAKTIIVQLNSTVRINCTRPNNNTRKGIHIGPGQAFYATGDIIGDIKQAHCNVSRADWNNTLQQVAEQLHNNFNKTIVFNEHSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWYANDNTSTQNDMQSNDTITLPCRIKQIINMWQRVGQAVYAPPIQGELRCDSNITGLLLTRDGGEGNDTIGKETFRPTGGDMRNNWRSELYKYKVVEIKPLGVAPTKAKRRVVEREKRAVGIGAVLLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQNNLLKAIEVQQHLLKLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTNVPWNVSWSNKTYNEIWENENMTWIKWEREIDNYTQTIYTLIEESQNQQEKNEQDLLALDKWASLWNWFDISNWLWYIRIFIMIVGGLIGLRIIFAVLSIVNRCRQGYSPLSFQALTPSQQEPDRPGGTKEGGGEQGRTSSIRLVSGFLALAWDDLRNLCLFLYHQLRDFILIVAR

Annotated regions:
phrase: MGAASITLTVQARQLLSGIVQQQNNLLKAIEVQQHLLKLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTNVPWNVSWSNKTYNEIWENENMTWIKWEREIDNYTQTIYTLIEESQNQQEKNEQDLLALDKWASLWNWFDISNWLWYIRIFIMIVGGLIGLRIIFAVLSIVNRCRQGYSPLSFQAL
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: DIKNCTFNITTELEDKKKNERALFYRLDVVPINDSSSNIGQYRLINCNVSAVKQACSKVTFEPIPIHYCAPAGFAILKCRDKEFNGTGPCKNVSTVQCTHGIKPVVSTQLLLNGSLAEGEVRIRSENLTNNAKTIIVQLNSTVRINCTRPNNNTRKGIHIGPGQAFYATGDIIGDIKQAHCNVSRADWNNTLQQVAEQLHNNFNKTIVFNEHSGGDLEVTTHSFNCGGEFFYCNTSGLFNSTWYANDNTSTQNDMQSNDTITLPCRIKQIINMWQRVGQAVYAPPIQGELRCDSNITGLLLTRDGGEGNDTIGKETFRPTGGDMRNNWRSELYKYKVVEIKPLGVAPTKAKRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: MWVTVYYGVPVWRDADTILFCASDARTYSTEKHNVWATHSCVPTDPNPRELSLENVTENFNMWKNNMVEQMHEDVISLWDESLKPCVKLTPLCVALNCTDARDNA
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: VQARQLLSGIVQQQNNLLKAIEVQQHLLKLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTNVPWNVSWSNKTYNEIWENENMTWIKWEREIDNYTQTIYTLIEESQNQQEKNEQDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MAGYLSPAAYMYVEEQEYLQAYEDVLERYKDERDKVQKKTFTKWINQHLMKVRKHVNDLYEDLRDGHNLISLLEVLSGDTLPREKGRMRFHRLQNVQIALDYLKRRQVKLVNIRNDDITDGNPKLTLGLIWTIILHFQISDIHVTGESEDMSAKERLLLWTQQATEGYAGVRCENFTTCWRDGKLFNAIIHKYRPDLIDMNTVAVQSNLANLEHAFYVAEKIGVIRLLDPEDVDVSSPDEKSVITYVSSLYDAFPKVPEGGEGIGANDVEVKWIEYQNMVNYLIQWIRHHVVTMSERTFPNNPLELKALYNQYLQFKEKEIPPKEMEKSKIKRLYKLLEIWIEFGRIKLLQGYHPNDIEKEWGKLIIAMLEREKALRPEVERLDMLQQIATRVQRDSVSCEDKLILARNALQSDSKRLESGVQFQNEAEIAGYILECENLLRQHVIDVQILIDGKYYQADQLVQRVAKLRDEIMALRNECSSVYSKGRMLTTEQTKLMISGITQSLNSGFAQTLHPSLNSGLTQSLTPSLTSSSVTSGLSSGMTSRLTPSVTPVYAPGFPSVVAPNFSLGVEPNSLQTLKLMQIRKPLLKSSLLDQNLTEEEVNMKFVQDLLNWVDEMQVQLDRTEWGSDLPSVESHLENHKNVHRAIEEFESSLKEAKISEIQMTAPLKLSYTDKLHRLESQYAKLLNTSRNQERHLDTLHNFVTRATNELIWLNEKEESEVAYDWSERNSSVARKKSYHAELMRELEQKEESIKAVQEIAEQLLLE

Annotated regions:
phrase: SAKERLLLWTQQATEGYAGVRCENFTTCWRDGKLFNAIIHKYRPDLIDMNTVAVQSNLANLEHAFYVAEKIGVIRLLDPEDVDVSSPDEKSVITYVSSLYDAF
type: DOMAIN
name: CH_dom
description: Calponin homology domain

phrase: VQKKTFTKWINQHLMKVRKHVNDLYEDLRDGHNLISLLEVLSGDTLPREKGRMRFHRLQNVQIALDYLKRRQVKLVNIRNDDITDGNPKLTLGLIWTIILHF
type: DOMAIN
name: CH_dom
description: Calponin homology domain

phrase: AKERLLLWTQQATEGYAGVRCENFTTCWRDGKLFNAIIHKYRPDLIDMNTVAVQSNLANLEHAFYVAEKIGVIRLLDPEDVDVSSPDEKSVITYVSS
type: DOMAIN
name: CH_dom
description: Calponin homology domain

phrase: QKKTFTKWINQHLMKVRKHVNDLYEDLRDGHNLISLLEVLSGDTLPREKGRMRFHRLQNVQIALDYLKRRQVKLVNIRNDDITDGNPKLTLGLIWTIIL
type: DOMAIN
name: CH_dom
description: Calponin homology domain

phrase: VQDLLNWVDEMQVQLDRTEWGSDLPSVESHLENHKNVHRAIEEFESSLKEAKISEIQMTAPLKLSYTDKLHRLESQYAKLLNTSRNQERHLDTLHNFVTRATNELIWLNEKEESEVAYDWSERNSSVARKKSYHAELMRELEQKEESIKAVQEIAEQL
type: REPEAT
name: Spectrin/alpha-actinin
description: Spectrin/alpha-actinin

phrase: MSAKERLLLWTQQATEGYAGVRCENFTTCWRDGKLFNAIIHKYRPDLIDMNTVAVQSNLANLEHAFYVAEKIGVIRLLDPEDVDVSSPDEKSVITYVSSLYDAF
type: DOMAIN
name: CH_dom
description: Calponin homology domain

phrase: RLDMLQQIATRVQRDSVSCEDKLILARNALQSDSKRLESGVQFQNEAEIAGYILECENLLRQHVIDVQILIDGKYYQADQLVQRVAKLRDEIMALRN
type: REPEAT
name: PCN-like_spectrin-like_rpt
description: Plectin-like, spectrin-like repeat

phrase: KVQKKTFTKWINQHLMKVRKHVNDLYEDLRDGHNLISLLEVLSGDTLPREKGRMRFHRLQNVQIALDYLKRRQVKLVNIRNDDITDGNPKLTLGLIWTIILHF
type: DOMAIN
name: CH_dom
description: Calponin homology domain

phrase: LVNIRNDDITDGNPKLTLGLIWTI
type: CONSERVED_SITE
name: Actinin_actin-bd_CS
description: Actinin-type actin-binding domain, conserved site

phrase: VQDLLNWVDEMQVQLDRTEWGSDLPSVESHLENHKNVHRAIEEFESSLKEAKISEIQMTAPLKLSYTDKLHRLESQYAKLLNTSRNQERH
type: REPEAT
name: Spectrin_repeat
description: Spectrin repeat

phrase: QKKTFTKWI
type: CONSERVED_SITE
name: Actinin_actin-bd_CS
description: Actinin-type actin-binding domain, conserved site

phrase: EVNMKFVQDLLNWVDEMQVQLDRTEWGSDLPSVESHLENHKNVHRAIEEFESSLKEAKISEIQMTAPLKLSYTDKLHRLESQYAKLLNTSRNQERHL
type: REPEAT
name: Spectrin/alpha-actinin
description: Spectrin/alpha-actinin
Protein sequence:
MAMAGGGRGDYGAFMERFVLPPPPSQQLPLHGLTFAIKDIFDIAGRVTGFGNPDWARTHAPAAATSPVVLAALAAGATSLGTTIMDEMAYSINGENTHYGTPTNPCAPGRVPGGSSSGSAVAVAANLVDFSLGTDTGGSVRVPAAYCGIFGLRPSHGLVSAENVIPMAQMFDTVGWFSRDLSTLSRVTKVLLPLPDDIVKQPTQVTIPMDCFQILGSLDDRTYQIINASVAKRFDSQILDNRNLGDFISDNVPSIGKFITDFSESELPSVPALSVISHVMRGLQRSQFKANHAEWVNTVKPNLGPGLRERILEAIASGDNESLEDFQAIRAEFKSALAALLKDHGILAIPTVPGPPPKVGMEAAPLENFRARAFSLLSIAGLSGFCQVSIPLGMRNGLPVSVSLVARHGADHFLLNVVEELYQTLIDEATKTWSS

Annotated regions:
phrase: GGSSSGSAVAVAANLVDFSLGTDTGGSVRVP
type: CONSERVED_SITE
name: Amidase_CS
description: Amidase, conserved site

phrase: QQLPLHGLTFAIKDIFDIAGRVTGFGNPDWARTHAPAAATSPVVLAALAAGATSLGTTIMDEMAYSINGENTHYGTPTNPCAPGRVPGGSSSGSAVAVAANLVDFSLGTDTGGSVRVPAAYCGIFGLRPSHGLVSAENVIPMAQMFDTVGWFSRDLSTLSRVTKVLLPLPDDIVKQPTQVTIPMDCFQILGSLDDRTYQIINASVAKRFDSQILDNRNLGDFISDNVPSIGKFITDFSESELPSVPALSVISHVMRGLQRSQFKANHAEWVNTVKPNLGPGLRERILEAIASGDNESLEDFQAIRAEFKSALAALLKDHGILAIPTVPGPPPKVGMEAAPLENFRARAFSLLSIAGLSGFCQVSIPLGMRNGLPVSVSLVARHGADHFL
type: DOMAIN
name: Amidase_dom
description: Amidase signature domain
Protein sequence:
MTRYIFVTGGVVSSLGKGIASASLAAILEARGLKVTILKLDPYINVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFIRTTMTKRNNFTTGRVYETVLRKERRGDYLGGTVQVIPHITDEIKRRIVEGAGDADVALVEIGGTVGDIESLPFLEATRQLKVEVGSRRALFMHLTLVPYIATAGEVKTKPTQHSVKEMRSIGLQPDILVCRSEHSIDQSSRRKIALFTNVEERAVIALEDAKSIYSIPMMLHAQGLDEIIVERFGLECGPADLSEWQSVVDNEANPEHEVTIAMVGKYMELLDAYKSLIEALKHAGIRNKTKVNIRYIDSEQVYQQGVDLLKGVDAILVPGGFGERGVEGKIQTVRYARENKIPYLGICLGLQVAVIEYARHVAGMEDAHSTEFNPKSAHPVVGLITEWQDASGKTEQRDEASDLGGTMRLGAQECKLVDGSTVRECYGKAIIEERHRHRYEVNGNLVPRLEEAGLQVAGWSQDGSLVEVVEVKDHPWFVACQFHPEFKSTPRDGHPLFEGFVRAALENAGGK

Annotated regions:
phrase: RYIFVTGGVVSSLGKGIASASLAAILEARGLKVTILKLDPYINVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFIRTTMTKRNNFTTGRVYETVLRKERRGDYLGGTVQVIPHITDEIKRRIVEGAGDADVALVEIGGTVGDIESLPFLEATRQLKVEVGSRRALFMHLTLVPYIATAGEVKTKPTQHSVKEMRSIGLQPDILVCRSEHSIDQSSRRKIALFTNVEERAVIALEDAKSIYSIPMMLHAQGLDEIIV
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: VTIAMVGKYMELLDAYKSLIEALKHAGIRNKTKVNIRYIDSEQVYQQGVDLLKGVDAILVPGGFGERGVEGKIQTVRYARENKIPYLGICLGLQVAVIEYARHVAGMEDAHSTEFNPKSAHPVVGLITEWQDASGKTEQRDEASDLGGTMRLGAQECKLVDGSTVRECYGKAIIEERHRHRYEVNGNLVPRLEEAGLQVAGWSQDGSLVEVVEVKDHPWFVACQFHPEFKSTPRDGHPLFEGF
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain

phrase: LLDAYKSLIEALKHAGIRNKTKVNIRYIDSEQVYQQGVDLLKGVDAILVPGGFGERGVEGKIQTVRYARENKIPYLGICLGLQVAVIEYARHVAGMEDAHSTEFNPKSAHPVVGLITEWQDASGKTEQRDEASDLGGTMRLGAQECKLVDGSTVRECYGKAIIEERHRHRYEVNGNLVPRLEEAGLQVAGWSQDGSLVEVVEVKDHPWFVACQFHPEFKSTPRDGHPLFEGFV
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: RYIFVTGGVVSSLGKGIASASLAAILEARGLKVTILKLDPYINVDPGTMSPFQHGEVFVTEDGAETDLDLGHYERFIRTTMTKRNNFTTGRVYETVLRKERRGDYLGGTVQVIPHITDEIKRRIVEGAGDADVALVEIGGTVGDIESLPFLEATRQLKVEVGSRRALFMHLTLVPYIATAGEVKTKPTQHSVKEMRSIGLQPDILVCRSEHSIDQSSRRKIALFTNVEERAVIALEDAKSIYSIPMMLHAQGLDEIIVERFG
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal
Protein sequence:
MQLFNKKILVGVTGGIAAYKTPDLVRKLKAEGADVRVVLTKGAAEFVSALSLQAVSGNQVHSQLLDEQAEAGMGHIELAKWADILLVAPATAHCMAKLAHGLADDLLSTLYLATTAKVFIAPAMNQQMWRARSTQDNFHKLQLQAINFIGPAAGEQACGDVGPGRMAEPEDIVSALIAASSGHLLAGKKVVITAGPTREPIDPVRYISNHSSGKMGYAVAQAAAEQGANVVLVSGPVSLATPPAVKRVNVSSAEDMLKAVQAEMRDTDIFIAAAAVADYRIAHQAANKIKKSDDELTLTFVKNPDILKTVAALSPAPFTVGFAAESQNVEEYARGKLEKKNLDMIAANDITVEGLGFNSDKNALHVIWQDGDKKLPPAPKTTLAEQLIGLITKQYNNKQSK

Annotated regions:
phrase: KKILVGVTGGIAAYKTPDLVRKLKAEGADVRVVLTKGAAEFVSALSLQAVSGNQVHSQLLDEQAEAGMGHIELAKWADILLVAPATAHCMAKLAHGLADDLLSTLYLATTAKVFIAPAMNQQMWRARSTQDNFHKLQLQAINFIGPAAGEQACGDVGPGRMAEPEDIVSAL
type: DOMAIN
name: Flavoprotein
description: Flavoprotein

phrase: LAGKKVVITAGPTREPIDPVRYISNHSSGKMGYAVAQAAAEQGANVVLVSGPVSLATPPAVKRVNVSSAEDMLKAVQAEMRDTDIFIAAAAVADYRIAHQAANKIKKSDDELTLTFVKNPDILKTVAALSPAPFTVGFAAESQNVEEYARGKLEKKNLDMIAANDITVEGLGFNSDKNALHV
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal