nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MPYPMQLGFQDATSPIMEELMYFHDHTLMIVFLISSLVLYIIILMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEIYNPYLTVKAMGHQWYWSYEFTDYENLMFDSYMIPTKDLSPGQLRLLEVDNRIVLPMELPIRMLISSEDVLHAWTMPSLGLKADAIPGRLNQITLTSSRPGVFYGQCSEICGSNHSFMPIVLEMASLKYFEKWSSMMQSFLSYLYI

Annotated regions:
phrase: PYLTVKAMGHQWYWSYEFTDYENLMFDSYMIPTKDLSPGQLRLLEVDNRIVLPMELPIRMLISSEDVLHAWTMPSLGLKADAIPGRLNQITLTSSRPGVFYGQCSEICGSNHSFMPIVLEMASLKYFEK
type: DOMAIN
name: CcO_II_C
description: Cytochrome c oxidase subunit 2, C-terminal

phrase: SPIMEELMYFHDHTLMIVFLISSLVLYIIILMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEIYNPYLTVKAMGHQWYWSYEFTDYENLMFDSYMIPTKDLSPGQLRLLEVDNRIVLPMELPIRMLISSEDVLHAWTMPSLGLKADAIPGRLNQITLTSSRPGVFYGQCSEICGSNHSFMPIVLEMASLKYFEKW
type: DOMAIN
name: Cyt_c_oxidase_su2
description: Cytochrome c oxidase, subunit II

phrase: LTVKAMGHQWYWSYEFTDYENLMFDSYMIPTKDLSPGQLRLLEVDNRIVLPMELPIRMLISSEDVLHAWTMPSLGLKADAIPGRLNQITLTSSRPGVFYGQCSEICGSNHSFMPIVLE
type: DOMAIN
name: CcO_II-like_C
description: Cytochrome c oxidase subunit II-like C-terminal

phrase: MPYPMQLGFQDATSPIMEELMYFHDHTLMIVFLISSLVLYIIILMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEI
type: DOMAIN
name: Cyt_c_oxidase_su2_TM_dom
description: Cytochrome C oxidase subunit II, transmembrane domain

phrase: NPYLTVKAMGHQWYWSYEFTDYENLMFDSYMIPTKDLSPGQLRLLEVDNRIVLPMELPIRMLISSEDVLHAWTMPSLGLKADAIPGRLNQITLTSSRPGVFYGQCSEICGSNHSFMPIVLEMASLKYFEKWSS
type: DOMAIN
name: CcO_II-like_C
description: Cytochrome c oxidase subunit II-like C-terminal

phrase: VLHAWTMPSLGLKADAIPGRLNQITLTSSRPGVFYGQCSEICGSNHSF
type: BINDING_SITE
name: Copper_CuA
description: Copper centre Cu(A)

phrase: PYPMQLGFQDATSPIMEELMYFHDHTLMIVFLISSLVLYIIILMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLR
type: DOMAIN
name: Cyt_c_oxidase_su2_TM_dom
description: Cytochrome C oxidase subunit II, transmembrane domain
Protein sequence:
MTVRLFLAKGREKSLLRRHPWVFSGAVQRVEGKALSGETIDIHDAQGKWLARGAYSPESQIRARVWTFLPDEEINIEFFIRRLQQAQNWRDWVAKRDGLDGYRLIAGESDGMPGITIDRFQNFLVLQLLSAGAEYQRAALITALQHCYPECAIYDRSDVAVRKKEGLPLAQGQVVGDLPPALLPITEHGMKLLVDIQQGHKTGFYLDQRDSRLAARNYSAGRRVLNCFSYTGAFAVSALMGGCTQVISVDTSQAALDIAKQNVELNQLDLSKAEFVRDDVFQLLRAYRTQGEKFDLIIMDPPKFVENKNQLAGACRGYKDINMLALQLLNPGGILLSFSCSGLMPTDLFQKILADAAVDAGRDVQFIEQYRQAADHPVIATYPEGLYLKGFACRVM

Annotated regions:
phrase: FLAKGREKSLLRRHPWVFSGAVQRVEGKALSGETIDIHDAQGKWLARGAYSPESQIRARVWT
type: DOMAIN
name: RlmI-like_PUA
description: RlmI-like, PUA domain

phrase: VRLFLAKGREKSLLRRHPWVFSGAVQRVEGKALSGETIDIHDAQGKWLARGAYSPESQIRARVWTFLPDEEINIEFFIRRLQQAQ
type: DOMAIN
name: PUA
description: PUA domain

phrase: MPGITIDRFQNFLVLQLLSAGAEYQRAALITALQHCYPECAIYDRSDVAVRKKEGLPLAQGQVVGDLPPALLPITEHGMKLLVDIQQGHKTGFYLDQRDSRLAARNYSAGRRVLNCFSYTGAFAVSALMGGCTQVISVDTSQAALDIAKQNVELNQLDLSKAEFVRDDVFQLLRAYRTQGEKFDLIIMDPPKFVENKNQLAGACRGYKDINMLALQLLNPGGILLSFSCSGLMPTDL
type: DOMAIN
name: SAM-dep_methyl-trfase
description: S-adenosylmethionine-dependent methyltransferase

phrase: VRLFLAKGREKSLLRRHPWVFSGAVQRVEGKALSGETIDIHDAQGKWLARGAYSPESQIRARVWTFLPD
type: DOMAIN
name: RlmI-like_PUA
description: RlmI-like, PUA domain
Protein sequence:
MSEGHIAAISKTNKRKNRRKKRRTQDVSDSSSDSSSDSENSSVEDNDTKLETVEKAASDVEDVTLSDIDMDKEEDEAALDDKKASRKEGSVLSSETVDKLNKVGLTTSDLTGNNGIHLGNIDLNKMSATLDESSNKLLENNKDKNGLKNQYLSMLFESYGDDMNELRNAPDFTSKTLVMLANVLKDGGDMFDLETLKTIVEDK

Annotated regions:
phrase: LKNQYLSMLFESYGDDMNELRNAPDFTSKTLVMLANVLKDGGDMF
type: DOMAIN
name: Rsa3_C
description: Ribosome-assembly protein 3, C-terminal
Protein sequence:
MVSRLCALWTVAALALLSRRAAAVGPVVRCEPCDARALEQCKPLAPECSELVREPGCGCCLTCALPEGRPCGVYSERCGSGLSCQPRRGELRPLQALLEGRGLCTNVTTGSKLRTFLLQGPHGPGNSSDSEEDQNASSIENQAIPSSPRVSDSKSHPPHTKIDIIRKEQAKNTQRYKVEYDSQSTDTLNFSSESKQETEYGPCRREMEDTLNHLKIQNVLSPRGFHIPNCDKKGFYKKKQCRPSKGRKRGYCWCVDKYGQPLPGYDGKGKGDVHCYNLESK

Annotated regions:
phrase: GCGCCLTCALPEGRP
type: CONSERVED_SITE
name: Insulin_GF-bd_Cys-rich_CS
description: Insulin-like growth factor binding protein, N-terminal, Cys-rich conserved site

phrase: HIPNCDKKGFYKKKQCRPSKGRKRGYCWCVDKY
type: DOMAIN
name: Thyroglobulin_1
description: Thyroglobulin type-1

phrase: PCRREMEDTLNHLKIQNVLSPRGFHIPNCDKKGFYKKKQCRPSKGRKRGYCWCVDKYGQPLPGYDGKGKGDVH
type: DOMAIN
name: Thyroglobulin_1
description: Thyroglobulin type-1

phrase: PVVRCEPCDARALEQCKPLAPECSELVREPGCGCCLTCALPEGRPCGVYSERCGSGLSCQPRRGELRPLQALLEGRGLCTN
type: DOMAIN
name: IGFBP-like
description: Insulin-like growth factor-binding protein, IGFBP

phrase: IPNCDKKGFYKKKQCRPSKGRKRGYCWCVDKYGQPLPGYDGKGKGDVHCYNL
type: DOMAIN
name: Thyroglobulin_1
description: Thyroglobulin type-1

phrase: VRCEPCDARALEQCKPLAPECSELVREPGCGCCLTCALPEGRPCGVYSERCGSGLSCQPRRGELRPLQALLEGRGLCT
type: DOMAIN
name: IGFBP-like
description: Insulin-like growth factor-binding protein, IGFBP

phrase: CEPCDARALEQCKPLAPECSELVREPGCGCCLTCALPEGRPCGVYSERCGSGLS
type: DOMAIN
name: IGFBP-like
description: Insulin-like growth factor-binding protein, IGFBP

phrase: YGPCRREMEDTLNHLKIQNVLSPRGFHIPNCDKKGFYKKKQCRPSKGRKRGYCWCVDKYGQPLPGYDGKGKGDVH
type: DOMAIN
name: Thyroglobulin_1
description: Thyroglobulin type-1

phrase: CRREMEDTLNHLKIQNVLSPRGFHIPNCDKKGFYKKKQCRPSKGRKRGYCWCVDKYGQPLPGYDGKGKGDVH
type: DOMAIN
name: Thyroglobulin_1
description: Thyroglobulin type-1
Protein sequence:
MGSDTLAAPPHGAPRVDRDVVSRFATCCRALGLTVNDRQRPADLTAARAGFAGLTHLAHDQCDAWIGLAAAGEVTPAVVDAVWRTVASAGVLQREIGLAAGELGFTYDTGWYLQFRATEPDDFQLAYAARLYEAGEFGEADGLVGEILARRPGWFDARWLQVAINHRAQRWSDVVRLLTPVVTLPSLDDVTSHAVRTALGISLARLGMFAPAMSYLEDPAGPIEVAAVDGALAKALTLRAQGEDDEATEVLQDLFATHPENTQVEQALLDTSFGLVTTTSARIEARSDPWDPETEPSEAEFVDPGAKDRKAHLLLEAEAELAEFIGLEEVKFQVARLKSSVAMAIRRQERGLAVAQRTNHLVFAGPPGTGKTTIARVVAKIYCGLGLLKKETVREVHRADLIGQHIGETEAKTNAIIDSALDGVLFLDEAYALVSTGAKNDFGLVAIDTLLARMENDRDRLVVIVAGYRKDLDAFLDTNEGLRSRFTRSIDFPSYTAPELVEIAVRMAEKRDSVFEKAAHDDMERLFTHLAQATTPDANGVERRSLDIAGNARFVRNLVERSEEEREYRLDHSDQEDFTDEEMMTITAGDVQRSAAPLLRGLGLSVPA

Annotated regions:
phrase: DIAGNARFVRNLVERSEEEREYRLDHSDQEDFTDEEMMTITAGD
type: DOMAIN
name: AAA_lid_6
description: CbbX, AAA lid domain

phrase: RTNHLVFAGPPGTGKTTIARVVAKIYCGLGLLKKETVREVHRADLIGQHIGETEAKTNAIIDSALDGVLFLDEAYALVSTGAKNDFGLVAIDTLLARMENDRDRLVVIVAGYRKDLDAFLDTNEGLRSRFTRSIDFPSY
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: TCCRALGLTVNDRQRPADLTAARAGFAGLTHLAHDQCDAWIGLAAAGEVTPAVVDAVWRTVASAGVLQREIGLAAGELGFTYDTGWYLQFRATEPDDFQLAYAARLYEAGEFGEADGLVGEILARRPGWFDARWLQVAINHRAQRWSDVVRLLTPVVTLPSLDDVTSHAVRTALGISLARLGMFAPAMSYLEDPAGPIEVAAVDGALAKALTLRAQGEDDEATEVLQDLFATHPENTQVEQALLDTSFGLVTTTSARIEARSDPWDPETE
type: DOMAIN
name: T7SS_EccA1-like_N
description: ESX-1 secretion system protein EccA1-like, N-terminal domain

phrase: VFAGPPGTGKTTIARVVAKIYCGLGLLKKETVREVHRADLIGQHIGETEAKTNAIIDSALDGVLFLDEAYALVSTGAKNDFGLVAIDTLLARMENDRDRLVVIVAGYRKDLDAFLDTNEGLRSRFTRSIDF
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core
Protein sequence:
MSTPVFTVADIRKTFLDFFAAKGHTVVPSSSLVPGNDPTLMFTNSGMVQFKDVFLGVDKRPYVRATSVQACLRAGGKHNDLENVGYTARHHTFFEMLGNWSFGDYFKRESLKWAWELLTEVYKLPAERLLATVYEEDDEAYDIWTKEIGLPPERVIRIGDNKGGRYKSDNFWMMADTGPCGPCSEIFYDHGDHIPGGPPGSPDEDGDRFIEIWNNVFMQFNMAEDGSVTPLPAPCVDTGMGLERLAAILQHVHSNYEIDIFDALIKAASRETGEADLGHKSLRVIADHIRATAFLVSDGVNPSNEGRGYVQRRIIRRAIRHGYLLGKKTPFFHKLVADLAGLMGDAYPRLAADAQRITEVLKAEEERFFETLETGMQILDAALADGVKVLPGEVAFKLHDTYGFPLDLSADVCRERGLSVDEAGFTVAMNQQKAQARAAGKFKMDRALDYSGTGNVFTGYEHLEETSKIIAIYADGVSAAALKAGQNGVIVLDTTPFYAESGGQAGDEGELISGSARFAVSDTLKIKADVYGHHGTLAEGTLNVGDHVSARVNKEVRAATVRNHSATHLMHKALREVLGAHVQQKGSLVNAERTRFDFAHNAPMTDAQIREVEARVNAEILANSATDASEMDMEAAQKTGAMMLFGEKYGDSVRVLSIGSSKELCGGTHVGRTGDIGLFKIVAESGVASGVRRVEAVTGQNALAYLQSLESTVQSAAGTLKASPSELQNRIGQVLDQVKALEKEVAALKGKLASSQGDELMLQAVDVKGLKVLAARLEGADAKTLRETMDKLKDKLKTAVIVLAAVDGSKVQIAAGVTSDSTGKVKAGELVNFVAGQVGGKGGGKADMAMAGGTDASNLNAALDSVLGWVSAKL

Annotated regions:
phrase: LKVLAARLEGADAKTLRETMDKLKDKLKTAVIVLAAVDGSKVQIAAGVTSDSTGKVKAGELVNFVAGQVGGKGGGKADMAMAGGTDASNLNAALDSVLGWV
type: DOMAIN
name: DHHA1_dom
description: DHHA1 domain

phrase: VRVLSIGSSKELCGGTHVGRTGDIGLFKIVAESGVASGVRRV
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD

phrase: FTVADIRKTFLDFFAAKGHTVVPSSSLVPGNDPTLMFTNSGMVQFKDVFLGVDKRPYVRATSVQACLRAGGKHNDLENVGYTARHHTFFEMLGNWSFGDYFKRESLKWAWELLTEVYKLPAERLLATVYEEDDEAYDIWTKEIGLPPERVIRIGDNKGGRYKSDNFWMMADTGPCGPCSEIFYDHGDHIPGGPPGSPDEDGDRFIEIWNNVFMQFNMAEDGSVTPLPAPCVDTGMGLERLAAILQHVHSNYEIDIFDALIKAASRETGEADLGHKSLRVIADHIRATAFLVSDGVNPSNEGRGYVQRRIIRRAIRHGYLLGKKTPFFHKLVADLAGLMGDAYPRLAADAQRITEVLKAEEERFFETLETGMQILDAALADGVKVLPGEVAFKLHDTYGFPLDLSADVCRERGLSVDEAGFTVAMNQQKAQARAAGKFKMDRALDYSGTGNVFTGYEHLEETSKIIAIYADGVSAAALKAGQNGVIVLDTTPFYAESGGQAGDEGELISGSARFAVSDTLKIKADVYGHHGTLAEGTLNVGDHVSARVNKEVRAATVRNHSATHLMHKALREVLGAHVQQKGSLVNAERTRFDFAHNAPMTDAQIREVEARVNAEILANSATDASEMDMEAAQKTGAMMLFGEKYGDSVRVLSIGSSKELCGGTHVGRTGDIGLFKIVAESGVASGVRRVEAVTGQNALAYLQ
type: DOMAIN
name: Ala-tRNA-synth_IIc_core
description: Alanyl-tRNA synthetase, class IIc, core domain

phrase: DIRKTFLDFFAAKGHTVVPSSSLVPGNDPTLMFTNSGMVQFKDVFLGVDKRPYVRATSVQACLRAGGKHNDLENVGYTARHHTFFEMLGNWSFGDYFKRESLKWAWELLTEVYKLPAERLLATVYEEDDEAYDIWTKEIGLPPERVIRIGDNKGGRYKSDNFWMMADTGPCGPCSEIFYDHGDHIPGGPPGSPDEDGDRFIEIWNNVFMQFNMAEDGSVTPLPAPCVDTGMGLERLAAILQHVHSNYEIDIFDALIKAASRETGEADLGHKSLRVIADHIRATAFLVSDGVNPSNEGRGYVQRRIIRRAIRHGYLLGKKTPFFHKLVADLAGLMGDAYPRLAADAQRITEVLKAEEERFFETLETGMQILDAALADGVKVLPGEVAFKLHDTYGFPLDLSADVCRERGLSVDEAGFTVAMNQQKAQARAAGKFKMDRALDYSGTGNVFTGYEHLEETSKIIAIYADGVSAAALKAGQNGVIVLDTTPFYAESGGQAGDEGELISGSARFAVSDTLKIKADVYGHHGTLAEGTLNVGDHVSARVNK
type: DOMAIN
name: Ala-tRNA-synth_IIc_N
description: Alanyl-tRNA synthetase, class IIc, N-terminal

phrase: VRVLSIGSSKELCGGTHVGRTGDIGLFKIVAESGVASGVRRV
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD
Protein sequence:
MDIKRTVLWVIFFMSAVMLFDNWQRDHGRPSMFFPSATPTKTVGSAAPGTTTPGTQPADLPATNAAAPGNAPAATQSQLVKFNTDVYSGEIDTRGGTLSKLSLVNKGDGKQPDLVITLFDRTANHTYLARTGLLGGDFPNHNDIYTPLPNQQHDLTGDEKSFQLSFESPVKGGVKVIKTYTFTRGSYVIGVDTKIQNVGTAPVTPSVYMELVRDDQPVETPRFSHTFIGPAVYTDQHHFQKMTFGDIDKNKQDYATSADNGWIAMVQHYFASAWIPQQGVKRDIYVEKIDPALYRVGVKEPVPTIAPGQTVDVSARLFAGPEEERMLEGIAPGLELVKDYGWVTIIAKPLFWLLEKIHSYVGNWGWSIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKGDPQKMNSALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWILWIHDLSQQDPFFILPVLMAVSMFLQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYITRMMGQTKAKAA

Annotated regions:
phrase: NWGWSIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKGDPQKMNSALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWILWIHDLSQQDPFFILPVLMAVSMFLQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYIT
type: DOMAIN
name: YidC/Oxa/ALB_C
description: Membrane insertase YidC/Oxa/ALB, C-terminal

phrase: GWSIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKGDPQKMNSALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWILWIHDLSQQDPFFILPVLMAVSMFLQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYIT
type: DOMAIN
name: YidC_ALB_C
description: Membrane insertase YidC/ALB, C-terminal

phrase: KRTVLWVIFFMSAVMLFDNWQRDHGRPSMFFPSATPTKTVGSAAPGTTTPGTQPADLPATNAAAPGNAPAATQSQLVKFNTDVYSGEIDTRGGTLSKLSLVNKGDGKQPDLVITLFDRTANHTYLARTGLLGGDFPNHNDIYTPLPNQQHDLTGDEKSFQLSFESPVKGGVKVIKTYTFTRGSYVIGVDTKIQNVGTAPVTPSVYMELVRDDQPVETPRFSHTFIGPAVYTDQHHFQKMTFGDIDKNKQDYATSADNGWIAMVQHYFASAWIPQQGVKRDIYVEKIDPALYRVGVKEPVPTIAPGQTVDVSARLFAGPEEERMLEGIAPGLELVKDYGWVTIIAKPLFWLLEKIHSYV
type: DOMAIN
name: Membr_insert_YidC_N
description: Membrane insertase YidC, N-terminal

phrase: QLVKFNTDVYSGEIDTRGGTLSKLSLVNKGDGKQPDLVITLFDRTANHTYLARTGLLGGDFPNHNDIYTPLPNQQHDLTGDEKSFQLSFESPVKGGVKVIKTYTFTRGSYVIGVDTKIQNVGTAPVTPSVYMELVRDDQPVETPRFSHTFIGPAVYTDQHHFQKMTFGDIDKNKQDYATSADNGWIAMVQHYFASAWIPQQGVKRDIYVEKIDPALYRVGVKEPVPTIAPGQTVDVSARLFAGPEEERMLEGIAPGLELVKD
type: DOMAIN
name: Membr_insert_YidC_N
description: Membrane insertase YidC, N-terminal

phrase: WGWSIVLLTLLIKAVFFPLSAASYKSMARMKAITPRMQALRERFKGDPQKMNSALMELYKTEKVNPFGGCLPVVIQIPVFISLYWVLLSSVEMRGAPWILWIHDLSQQDPFFILPVLMAVSMFLQTKLNPTPPDPVQAKMMMFMPIAFSVMFFFFPAGLVLYYVVNNVLSIAQQYYIT
type: DOMAIN
name: YidC/Oxa/ALB_C
description: Membrane insertase YidC/Oxa/ALB, C-terminal

phrase: VKFNTDVYSGEIDTRGGTLSKLSLVNKGDGKQPDLVITLFDRTANHTYLARTGLLGGDFPNHNDIYTPLPNQQHDLTGDEKSFQLSFESPVKGGVKVIKTYTFTRGSYVIGVDTKIQNVGTAPVTPSVYMELVRDDQPVETPRFSHTFIGPAVYTDQHHFQKMTFGDIDKNKQDYATSADNGWIAMVQHYFASAWIPQQGVKRDIYVEKIDPALYRVGVKEPVPTIAPGQTVDVSARLFAGPEEERMLEGIAPGLELVKDYGWVTIIAKPLFW
type: DOMAIN
name: Membr_insert_YidC_N
description: Membrane insertase YidC, N-terminal
Protein sequence:
MKIAILSRNSKLYSTRRLIEAGRKRGHTVRILDPLRCYMRIAADGFSLHYKGKPITGFDAVIPRIGASVTRYATAVLRQLEFMGTYTPNPSDAILRSRDKLRAHQLLAAQGIDMPVTVFGDNPDDTQDLLSMLGPPPHVVKLNEGAQGAGVILTEKASASRGVVEALRGLYANFIVQEFIGEAEGADLRCFVVGDKVVAAMRRQAAEGDFRSNLHLGGTAAVTEATEQEQEVAVRSARALGLTVAGVDLIRSKRGPLVLEVNSTPGLEGVEGVCGVDVAAAIVQHLEQSVRRSAG

Annotated regions:
phrase: RDKLRAHQLLAAQGIDMPVTVFGDNPDDTQDLLSMLGPPPHVVKLNEGAQGAGVILTEKASASRGVVEALRGLYANFIVQEFIGEAEGADLRCFVVGDKVVAAMRRQAAEGDFRSNLHLGGTAAVTEATEQEQEVAVRSARALGLTVAGVDLIRSKRGPLVLEVNSTPGLEGVEGVCGVDVAAAIVQ
type: DOMAIN
name: ATP-grasp_RimK-type
description: ATP-grasp fold, RimK-type

phrase: MKIAILSRNSKLYSTRRLIEAGRKRGHTVRILDPLRCYMRIAADGFSLHYKGKPITGFDAVIPRIGASVTRYATAVLRQLEFMGTYTPNPSDA
type: DOMAIN
name: Rimk_N
description: RimK, preATP-grasp domain

phrase: HQLLAAQGIDMPVTVFGDNPDDTQDLLSMLGPPPHVVKLNEGAQGAGVILTEKASASRGVVEALRGLYANFIVQEFIGEAEGADLRCFVVGDKVVAAMRRQAAEGDFRSNLHLGGTAAVTEATEQEQEVAVRSARALGLTVAGVDLIRSKRGPLVLEVNSTPGLEGVEGVCGVDVAAAIVQHL
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold
Protein sequence:
MSGKPVIHEFIVVEGRDDTTAINRSVIADTIETNGSALSQETIEKIRHAQELRGVIIFTDPDFPGEKIRKQIDSAVPGCKHAFINRQDALPKAGRGLGVEHASSANIREALENFHTSGAPTEKQFISKDILVHLGLLGGVGAKERREKIGNILKIGYTNGKQLQTRLESFAISEEQLVAACQKIMQEEENE

Annotated regions:
phrase: LGVEHASSANIREALENFHTSGAPTEKQFISKDILVHLGLLGGVGAKERREKIGNILKIGYTNGKQLQTRLESFAISEEQLVA
type: DOMAIN
name: RNase_M5_C
description: Ribonuclease M5, C-terminal domain

phrase: IHEFIVVEGRDDTTAINRSVIADTIETNGSALSQETIEKIRHAQELRGVIIFTDPDFPGEKIRKQIDSAVPGCKHAF
type: DOMAIN
name: TOPRIM_RNase_M5-like
description: Ribonuclease M5-like, TOPRIM domain

phrase: HEFIVVEGRDDTTAINRSVIADTIETNGSALSQETIEKIRHAQELRGVIIFTDPDFPGEKIRKQIDSAVPGCK
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: HEFIVVEGRDDTTAINRSVIADTIETNGSALSQETIEKIRHAQELRGVIIFTDPDFPGEKIRKQIDSAVPGCKHAFINRQDAL
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: FIVVEGRDDTTAINRSVIADTIETNGSALSQETIEKIRHAQELRGVIIFTDPDFPGEKIRKQIDSA
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain
Protein sequence:
MKNTAGILAIAGMLIAPLAHADVILHAFNWKYSEVTAKADLIKGAGYKQVLISPPLKSSGNEWWARYQPQDLRLVDSPLGNKQDLEQLIAAMQARGIAVYADVVLNHMANESWKRNDLNYPGTELLGQYAANPDYYSRQRLFGDLGQNLLSASDFHPEGCITDWSDPGHVQYWRLCGGAGDKGLPDLDPNNWVVSQQQAYLKALKGMGIKGFRVDAVKHMSDYQINAVFTPEIKQGMHVFGEVITTGGAGSTDYERFLKPYLDNSGQGAYDFPLFASLRGALGYGGSMNQLADPGAYGQALPGNRAVTFAITHDIPTNDGFRYQILNQTDEKLAYAYLLGRDGGSPLVYSDHGETQDKDGLRWQDYYLRSDLKGMIRFHNAVQGQPMQLIGSGDCFVLFKRGKQGLVGVNKCDYEQEYWLDTAKFELNWYRNYKDVLDQSAVINVQSQWVRVAMPARRPPLAAE

Annotated regions:
phrase: DVILHAFNWKYSEVTAKADLIKGAGYKQVLISPPLKSSGNEWWARYQPQDLRLVDSPLGNKQDLEQLIAAMQARGIAVYADVVLNHMANESWKRNDLNYPGTELLGQYAANPDYYSRQRLFGDLGQNLLSASDFHPEGCITDWSDPGHVQYWRLCGGAGDKGLPDLDPNNWVVSQQQAYLKALKGMGIKGFRVDAVKHMSDYQINAVFTPEIKQGMHVFGEVITTGGAGSTDYERFLKPYLDNSGQGAYDFPLFASLRGALGYGGSMNQLADPGAYGQALPGNRAVTFAITHDIPTNDGFRYQILNQTDEKLAYAYLLGRDGGSPLVYSDHGETQDKDGLRWQDYYLRSDLKGMIRF
type: DOMAIN
name: Glyco_hydro_13_cat_dom
description: Glycosyl hydrolase, family 13, catalytic domain

phrase: VTAKADLIKGAGYKQVLISPPLKSSGNEWWARYQPQDLRLVDSPLGNKQDLEQLIAAMQARGIAVYADVVLNHMANESWKRNDLNYPGTELLGQYAANPDYYSRQRLFGDLGQNLLSASDFHPEGCITDWSDPGHVQYWRLCGGAGDKGLPDLDPNNWVVSQQQAYLKALKGMGIKGFRVDAVKHMSDY
type: DOMAIN
name: Glyco_hydro_13_cat_dom
description: Glycosyl hydrolase, family 13, catalytic domain
Protein sequence:
MRFGTIAVVGDVILDRYLEGEVNRLSPEAPVPVLSEGRERARPGGAANVALNAAALGCQVRLVGLVGDDTPGRQLAALLAGARLPGTVSCAGLVVEGSYRTVVKTRVLAGRQQIVRIDEENPPPPFGAPRSSALHEAVRQALRGADVIVCSDYAKGVLGDDILALVMKEAQQARVPVIADPKRANLSAYAGAALLTPNQAELRQAVGMDSLESDSDIAEAALQASLQFGGDVLLTRSGAGMSLWRRDGTLRHAHSVPSEVYDVSGAGDTVIASMAAFLSGGLAMDDAMQLANIAAGLVVGKLGTASVSLAEIMAAFSQGQRVGMGRVPALGPVICHGLDERARHRLALWRQAGERIVFTNGCFDLLHPGHLKLLAEAATVGDRLVVGLNSNDSVARLKGKGRPIQDEKARAAMLAAMRGVDMVVVFGEDTPEGLIRALKPDVLVKGDDYREEDIVGADFVKSQGGLVVRVPVLPGQSTSNLASRAGSTQG

Annotated regions:
phrase: TIAVVGDVILDRYLEGEVNRLSPEAPVPVLSEGRERARPGGAANVALNAAALGCQVRLVGLVGDDTPGRQLAALLAGARLPGTVSCAGLVVEGSYRTVVKTRVLAGRQQIVRIDEENPPPPFGAPRSSALHEAVRQALRGADVIVCSDYAKGVLGDDILALVMKEAQQARVPVIADPKRANLSAYAGAALLTPNQAELRQAVGMDSLESDSDIAEAALQASLQFGGDVLLTRSGAGMSLWRRDGTLRHAHSVPSEVYDVSGAGDTVIASMAAFLSGGLAMDDAMQLANIAAGLVVGKLGTASVSLAE
type: DOMAIN
name: RfaE_dom_I
description: RfaE bifunctional protein, domain I

phrase: FTNGCFDLLHPGHLKLLAEAATVGDRLVVGLNSNDSVARLKGKGRPIQDEKARAAMLAAMRGVDMVVVFGEDTPEGLIRALKPDVLVKGDD
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: IAVVGDVILDRYLEGEVNRLSPEAPVPVLSEGRERARPGGAANVALNAAALGCQVRLVGLVGDDTPGRQLAALLAGARLPGTVSCAGLVVEGSYRTVVKTRVLAGRQQIVRIDEENPPPPFGAPRSSALHEAVRQALRGADVIVCSDYAKGVLGDDILALVMKEAQQARVPVIADPKRANLSAYAGAALLTPNQAELRQAVGMDSLESDSDIAEAALQASLQFGGDVLLTRSGAGMSLWRRDGTLRHAHSVPSEVYDVSGAGDTVIASMAAFLSGGLAMDDAMQLANIAAGLVVGKLGTA
type: DOMAIN
name: PfkB_dom
description: Carbohydrate kinase PfkB

phrase: LWRQAGERIVFTNGCFDLLHPGHLKLLAEAATVGDRLVVGLNSNDSVARLKGKGRPIQDEKARAAMLAAMRGVDMVVVFGEDTPEGLIRALKPDVLVKGDDYREEDIVGADFVKSQGGLVVRVPVLPGQSTSNLAS
type: DOMAIN
name: RfaE_dom_II
description: RfaE bifunctional protein, domain II

phrase: IVFTNGCFDLLHPGHLKLLAEAATVGDRLVVGLNSNDSVARLKGKGRPIQDEKARAAMLAAMRGV
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain
Protein sequence:
MRGLVNKLVSRSLSISGKWQNQQLRRLNIHEYQGAELMGKYGVNVPKGVAASSLEEVKKAIQDVFPNESELVVKSQILAGGRGLGTFKSGLKGGVHIVKRDEAEEIAGKMLGQVLVTKQTGPQGKVVSKVYLCEKLSLVNEMYFSIILDRKSAGPLIIACKKGGTSIEDLAEKFPDMIIKVPIDVFAGITDEDAAKVVDGLAPKAADRKDSIEQVKKLYELFRKTDCTMLEINPLAETSTNQLVAADAKLNFDDNAAFRQKEVFAMRDPTQEDPREVAAAKVDLNYIGLDGEIGCMVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEHQVVEAFKILTSDDKVKAILVNIFGGIMKCDVIASGIVNAAKEVALKVPVVVRLEGTNVEQGKRILKESGMKLITADDLDDAAEKAVKALAH

Annotated regions:
phrase: MVNGAGLAMATMDIIKLHGGTPANFLDVGGNASEHQVVEAFKILTSDDKVKAILVNIFGGIMKCDVIASGIVNAAKEVALKVPVVVRLEGTNVEQGKRILKESGMKLITADDLDDAAEKA
type: DOMAIN
name: SUCC_ACL_C
description: ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain

phrase: AELMGKYGVNVPKGVAASSLEEVKKAIQDVFPNESELVVKSQILAGGRGLGTFKSGLKGGVHIVKRDEAEEIAGKMLGQVLVTKQTGPQGKVVSKVYLCEKLSLVNEMYFSIILDRKSAGPLIIACKKGGTSIEDLAEKFPDMIIKVPIDVFAGITDEDAAKVVDGLAPKAADRKDSIEQVKKLYELFRKTDCTMLEINPLAETSTNQLVAADAKLNFDDNAAFRQ
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold

phrase: GEIGCMVNGAGLAMATMDIIKLHG
type: CONSERVED_SITE
name: Succ-CoA_synthase_bsu_CS
description: Succinyl-CoA synthetase, beta subunit, conserved site

phrase: NIHEYQGAELMGKYGVNVPKGVAASSLEEVKKAIQDVFPNESELVVKSQILAGGRGLGTFKSGLKGGVHIVKRDEAEEIAGKMLGQVLVTKQTGPQGKVVSKVYLCEKLSLVNEMYFSIILDRKSAGPLIIACKKGGTSIEDLAEKFPDMIIKVPIDVFAGITDEDAAKVVDGLAPKAADRKDSIEQVKKLYELFRKTDCTMLEINPL
type: DOMAIN
name: ATP-grasp_succ-CoA_synth-type
description: ATP-grasp fold, succinyl-CoA synthetase-type
Protein sequence:
MRTKSLKKNRINVVTLGCSKNVYDSEILMGQLKANDKDVVHEEDGNIVVINTCGFIDNAKEQSVNTILEFVEKKQQGDVDKVFVTGCLSERYKPDLQKEIPDVDQYFGTTELPGLLSALEADYKHELIGERLTTTPKNYAYLKIAEGCDRPCSFCAIPLMRGGHKSTPIENLVTEAEKLAANGVKELILIAQDLTYYGLDLYKKRNLAELLENLVKVEGIEWIRLHYAFPTGFPMDVLEVMKREPKVCNYLDIPLQHISDDLLKSMRRGTTHEKTTKLLKEFRKTVPEMAIRTTLIVGYPGETEEHYQELKEWVKEMRFERLGCFTYSHEENTHAYNLEDDVPQEVKQERANEIMEIQSQISWELNQQKIGEVFNVVIDRKEGNYFIGRTEYDSPDVDNEVLIDATTVYLKTGDYYDVKIAEAADFDLYGEPLNVTTEKPKRKELKIKSV

Annotated regions:
phrase: IGEVFNVVIDRKEGNYFIGRTEYDSPDVDNEVLIDATTVYLKTGDYYDVKIAEAADFDLYG
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: RINVVTLGCSKNVYDSEILMGQLKANDKDVVHEEDGNIVVINTCGFIDNAKEQSVNTILEFVEKKQQGDVDKVFVTGCLSERYKPDLQKEIPDVDQYF
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: QQKIGEVFNVVIDRKEGNYFIGRTEYDSPDVDNEVLIDATTVYLKTGDYYDVKIAEAADFDLYGEPL
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: NRINVVTLGCSKNVYDSEILMGQLKANDKDVVHEEDGNIVVINTCGFIDNAKEQSVNTILEFVEKKQQGDVDKVFVTGCLSERYKPDLQKEIPDVDQYFGTTELPGLLSALEADY
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: LKIAEGCDRPCSFCAIPLMR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: KKNRINVVTLGCSKNVYDSEILMGQLKANDKDVVHEEDGNIVVINTCGFIDNAKEQSVNTILEFVEKKQQGDVDKVFVTGCLSERYKPDLQKEIPDVDQYFGTTELPGLLSALEADYKHELIGERLTTTPKNYAYLKIAEGCDRPCSFCAIPLMRGGHKSTPIENLVTEAEKLAANGVKELILIAQDLTYYGLDLYKKRNLAELLENLVKVEGIEWIRLHYAFPTGFPMDVLEVMKREPKVCNYLDIPLQHISDDLLKSMRRGTTHEKTTKLLKEFRKTVPEMAIRTTLIVGYPGETEEHYQELKEWVKEMRFERLGCFTYSHEENTHAYNLEDDVPQEVKQERANEIMEIQSQISWELNQQKIGEVFNVVIDRKEGNYFIGRTEYDSPDVDNEVLIDATTVYLKTGDYYDVKIAEAADFDLYGEPL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: IAEGCDRPCSFCAIPLMRGGHKSTPIENLVTEAEKLAANGVKELILIAQDLTYYGLDLYKKRNLAELLENLVKVEGIEWIRLHYAFPTGFPMDVLEVMKREPKVCNYLDIPLQHISDDLLKSMRRGTTHEKTTKLLKEFRKTVPEMAIRTTLIVGYPGETEEHYQELKEW
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TTPKNYAYLKIAEGCDRPCSFCAIPLMRGGHKSTPIENLVTEAEKLAANGVKELILIAQDLTYYGLDLYKKRNLAELLENLVKVEGIEWIRLHYAFPTGFPMDVLEVMKREPKVCNYLDIPLQHISDDLLKSMRRGTTHEKTTKLLKEFRKTVPEMAIRTTLIVGYPGETEEHYQELKEWVKEMRFERLGCFTYSHEENTHAYNLEDDVPQEVKQERANEIMEIQSQISWE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: NYAYLKIAEGCDRPCSFCAIPLMRGGHKSTPIENLVTEAEKLAANGVKELILIAQDLTYYGLDLYKKRNLAELLENLVKVEGIEWIRLHYAFPTGFPMDVLEVMKREPKVCNYLDIPLQHISDDLLKSMRRGTTHEKTTKLLKEFRKTVPEMAIRTTLIVGYPGETEEHYQELKEWVKEMRFERLGCFTYSHEENTHAYNLEDDVPQEVKQERANEIM
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain
Protein sequence:
MGLHDSFLALLLLLGGAWAQQAEINARVLRAQDCPVDLFFVLDTSESVALRVKPFGDLVAQVKDFTNRFIDKLTERYFRCDRFLAWNAGALHYSDSVVIIKDLTAMPSGRAELKNSVSAINYIGKGTHTDCAIKQGIERLLLGGSHLKENKYLIVVTDGHPLEGYKEPCGGLDDAANEAKHLGIKVFSVAISPHHLDQRLNIIATDHAYRRNFTATSLKPTRDLDVEETINNIIEMIKDNMEQSCCSFECHPPRGPPGPPGDPGHEGERGKPGLPGQKGDAGDPGRPGDMGPVGYQGMKGDKGSRGEKGSRGAKGAKGEKGKRGIDGIDGMKGEAGYPGLPGCKGSPGFDGTQGPPGPKGDPGAYGPKGGKGEPGEDGKPGRQGIPGSPGEKGAPGNRGEPGPLGETGDEGSPGADGPPGERGSNGERGPPGSPGDRGPRGDLGEPGPPGDQGREGPLGPPGDQGEPGPPGPKGYRGDDGPRGNEGPKGSPGAPGLPGDPGLMGERGEDGPPGNGTIGFPGAPGQQGDRGDPGINGTKGYVGPKGDEGEAGDPGNDNPTAGPSGIKGAKGHRGPEGRPGPPGPVGPPGPDECEILDIIMKMCSCCECTCGPVDLLFVLDSSESIGLQNFQIAKDFIIKVIDRLSKDERVKFEPGESRVGVVQYSHNNTQELVAMGDANIDNIGALKQAVKNLKWIAGGTHTGEALQFSKENLLRRFTSNNNVAIVITDGRSDTLRDRTPLTSLCEVTPVVSLGIGDIFRNNPNPDQLN

Annotated regions:
phrase: DLLFVLDSSESIGLQNFQIAKDFIIKVIDRLSKDERVKFEPGESRVGVVQYSHNNTQELVAMGDANIDNIGALKQAVKNLKWIAGGTHTGEALQFSKENLLRRFTSNNNVAIVITDGRSDTLRDRTPLTSLCEVTPVVSLGIGDIFRNNPNPDQL
type: DOMAIN
name: VWF_A
description: von Willebrand factor, type A

phrase: GPPGPPGDPGHEGERGKPGLPGQKGDAGDPGRPGDMGPVGYQGMKGDKGSRGEK
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: GPPGDQGREGPLGPPGDQGEPGPPGPKGYRGDDGPRGNEGPKGSPGAPGLPGDPGLMG
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: PGLMGERGEDGPPGNGTIGFPGAPGQQGDRGDPGINGTKGYVGPKGDEGEAGDPG
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: GSRGEKGSRGAKGAKGEKGKRGIDGIDGMKGEAGYPGLPGCKGSPGFDGTQGPPGP
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: DLLFVLDSSESIGLQNFQIAKDFIIKVIDRLSKDERVKFEPGESRVGVVQYSHNNTQELVAMGDANIDNIGALKQAVKNLKWIAGGTHTGEALQFSKENLLRRFTSNNNVAIVITDGRSDTLRDRTPLTSLCEVTPVVSLG
type: DOMAIN
name: VWF_A
description: von Willebrand factor, type A

phrase: DLFFVLDTSESVALRVKPFGDLVAQVKDFTNRFIDKLTERYFRCDRFLAWNAGALHYSDSVVIIKDLTAMPSGRAELKNSVSAINYIGKGTHTDCAIKQGIERLLLGGSHLKENKYLIVVTDGHPLEGYKEPCGGLDDAANEAKHLGIKVFSVAISPHHLDQRLNIIATDHAYRRNFTATSL
type: DOMAIN
name: VWF_A
description: von Willebrand factor, type A

phrase: PVDLFFVLDTSESVALRVKPFGDLVAQVKDFTNRFIDKLTERYFRCDRFLAWNAGALHYSDSVVIIKDLTAMPSGRAELKNSVSAINYIGKGTHTDCAIKQGIERLLLGGSHLKENKYLIVVTDGHPLEGYKEPCGGLDDAANEAKHLGIKVFSVAISPHHLDQRLNIIATDHAYRRNFTATSLKPTRDLDVEE
type: DOMAIN
name: VWF_A
description: von Willebrand factor, type A

phrase: PVDLLFVLDSSESIGLQNFQIAKDFIIKVIDRLSKDERVKFEPGESRVGVVQYSHNNTQELVAMGDANIDNIGALKQAVKNLKWIAGGTHTGEALQFSKENLLRRFTSNNNVAIVITDGRSDTLRDRTPLTSLCEVTPVVSLGIGDIFRNNPNPDQL
type: DOMAIN
name: VWF_A
description: von Willebrand factor, type A

phrase: DLFFVLDTSESVALRVKPFGDLVAQVKDFTNRFIDKLTERYFRCDRFLAWNAGALHYSDSVVIIKDLTAMPSGRAELKNSVSAINYIGKGTHTDCAIKQGIERLLLGGSHLKENKYLIVVTDGHPLEGYKEPCGGLDDAANEAKHLGIKVFSVAISPHHLDQRLNIIATDHAYRRNFTATSLKPTRDLDVEETINN
type: DOMAIN
name: VWF_A
description: von Willebrand factor, type A