nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MGELAGTKTNLLGLTRSGLESFVVGLGEKPFRARQLMKWMYRRAVGDIDAMSDLGKDFRRRLAEVAEIRTPEVVVAQSSADGTRKWLLRLESGQAIEMVFIPEPGRGTLCISSQVGCAMDCTFCSTAQQGFNRNLDTAEIVGQVWLANRELGYSPDGDRVITNVVFMGMGEPLANYRNVVPAAEVMMDDLGLDLSRRRVTISTSGLVPQMMRIADETNVALAVSLHAPNDELRSELVPINRRHPIADLLEACWHYVEKQNARSVTFEYVMLDGVNDRPAHARELAALLRGRPAKVNLIPFNPFPGTRYRRSTEEAIVKFRDLLIKGGVIATIRRTRGDDIDAACGQLVGRVNDRTTIRLGQKLVALQTVRA

Annotated regions:
phrase: SSQVGCAMDCTFCSTAQQGFNRNLDTAEIVGQVWLANRELGYSPDGDRVITNVVFMGMGEPLANYRNVVPAAEVMMDDLGLDLSRRRVTISTSGLVPQMMRIADETNVALAVSLHAPNDELRSELVPINRRHPIADLLEACWHYVEKQNARSVTFEYVMLDGVNDR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TNLLGLTRSGLESFVVGLGEKPFRARQLMKWMYRRAVGDIDAMSDLGKDFRRRLAEVAE
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: GTLCISSQVGCAMDCTFCSTAQQGFNRNLDTAEIVGQVWLANRELGYSPDGDRVITNVVFMGMGEPLANYRNVVPAAEVMMDDLGLDLSRRRVTISTSGLVPQMMRIADETNVALAVSLHAPNDELRSELVPINRRHPIADLLEACWHYVEKQNARSVTFEYVMLDGVNDRPAHARELAALLRGRPAKVNLIPFNPFPGTRYRRSTEEAIVKFR
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: EPGRGTLCISSQVGCAMDCTFCSTAQQGFNRNLDTAEIVGQVWLANRELGYSPDGDRVITNVVFMGMGEPLANYRNVVPAAEVMMDDLGLDLSRRRVTISTSGLVPQMMRIADETNVALAVSLHAPNDELRSELVPINRRHPIADLLEACWHYVEKQNARSVTFEYVMLDGVNDRPAHARELAALLRGRPAKVNLIPFNPFPGTRYRRSTEEAIVKFRDLLIKGGVIATIRRTRGD
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MKRSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMATAESLRSEFVIEVTGQVAAREQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEANDDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQVDLETSFLTEQEIQDITESLIARVMKETKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQDLTEVVRGVDFKVFSEAPAVKAIVVTGAADNYSRKDIDKMTEVAKQYGAKGLAWVKVVDGELNGPVAKFLTGIQEELTTALVLEDKDLVLFVADTLEVANATLGALRGRIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRAIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGGLAIGLDRFVMLLAGEENIREVIAFPKNNKATDPMTQAPSTVALKQLEELSLQVEEDETNKTN

Annotated regions:
phrase: LKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQVDLETSFLTEQEIQDITESLIARVMKETKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQDLTEVVRGVDFKVFSEAPAVKAIVVTGAADNYSRKDIDKMTEVAKQYGAKGLAWVKVVDGELNGPVAKFLTGIQEELTTALVLEDKDLVLFVADTLEVANATLGALRGRIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRAIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGGLAIGLDRFVMLLAGEENIREVIAF
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: DDTRLRYRYLDLRRPEMLENLKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQVDLETSFLTEQEIQDITESLIARVMKETKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQDLTEVVRGVDFKVFSEAPAVKAIVVTGAADNYSRKDIDKMTEVAKQYGAKGLAWVKVVDGELNGPVAKFLTGIQEELTTALVLEDKDLVLFVADTLEVANATLGALRGRIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRAIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGGLAIGLDRFVMLLAGEENIREVIAFPK
type: DOMAIN
name: Aa-tRNA-synt_II
description: Aminoacyl-tRNA synthetase, class II (D/K/N)

phrase: ITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMATAESLRSEFVIEVTGQVAAREQANDKLPTGAVELNVTALIV
type: DOMAIN
name: NA-bd_OB_tRNA
description: OB-fold nucleic acid binding domain, AA-tRNA synthetase-type

phrase: RSMYAGRVREEHIGQEITLKGWVGRRRDLGGLIFIDLRDREGIMQLVINPEKVSAEVMATAESLRSEFVIEVTGQVAAREQANDKLPTGAVELNVTALIVLNTAKTTPFEIKDGIEANDDTRLRYRYLDLRRPE
type: DOMAIN
name: Asp-tRNA-ligase_1_N
description: Aspartate-tRNA ligase, type 1, anticodon recognition domain

phrase: LKLRAKVTHSIRNYLDELEFIDVETPFLSKSTPEGARDYLVPSRVNKGHFYALPQSPQITKQLLMNAGFDRYYQIVKCFRDEDLRGDRQPEFTQVDLETSFLTEQEIQDITESLIARVMKETKGIEVTLPFPRMKYDDAMALYGSDKPDTRFDMLLQDLTEVVRGVDFKVFSEAPAVKAIVVTGAADNYSRKDIDKMTEVAKQYGAKGLAWVKVVDGELNGPVAKFLTGIQEELTTALVLEDKDLVLFVADTLEVANATLGALRGRIAKELGLIDNDKFNFLWVVDWPMFEWSEEEGRYMSAHHPFTLPQEETAHELEGDLAKVRAIAYDIVLNGYELGGGSLRINQKDLQERMFKALGFSTEEANDQFGFLLEAMDYGFPPHGGLAIGLDRFVMLLAGEENIREVIAFPKNN
type: DOMAIN
name: AspRS_core
description: Aspartate-tRNA ligase, type 1, core domain

phrase: APAVKAIVVTGAADNYSRKDIDKMTEVAKQYGAKGLAWVKVVDGELNGPVAKFLTGIQEELTTALVLEDKDLVLFVADTLEVANAT
type: DOMAIN
name: GAD_dom
description: GAD domain
Protein sequence:
MSRFAEVDDQYDPDAVEDRVFDYWDEVDAYERTVEHRADGEDFFFVDGPPYTSGSAHMGTTWNKTLKDAYIRYHRMRGYNVTDRPGYDMHGLPIETKVEERLGFDNKKDIEEFGEQNFIDECKSFAEEQLEGLQEDFKSFGVWMDWDDPYKTVDPEYMEAAWWGFSKAHDRDLVEQGQRSISQCPRCETAIANNEVEYDHVEDPSIYVKFPLAEREGHLVIWTTTPWTVPANTFVAVDEEMTYQAIEVDTGDGTETLYVGEPCVEDVVDHGGYEDYEVVGEHEGSDLVGWRYEHPLREEVPEAPAFEGALEVYGADYVEADRTGLVHSAPGHGEVDFERGQELGLSVFCPVGPDGVYEDAAGDYAGQFVKDADAAIMDDLEAKGLLLSRGTVNHDYGHCWRCDTPIIQMVTDQWFITVTDIKDELLANMEESEWFPQEARDNRFRSFIEESPDWNVSRQRYWGIPIPIWTPDDWSGDVEEAIVVSTREELAERVDQDIDPESVDLHKDTVDDLTITADGTTYTRVPDVFDVWLDSSVASWGTLGYPGNEDDFEELWPADLIMEAHDQTRGWFWSQLGMGSAALGEAPYETVLMHGWALAEDGRKMSKSIGNIVAPQEAIDRHGADPMRLFLLTQNPQGDDMRFSWDEMENRQRDLNILWNVFRFPLPYMRLDDFDPDAVALDEAALETVDEWVLSRLSTVTAEMTDHWENFRQDKALDELLAFIVEDVSRFYIQVVRERMWEEETSESKLAAYATLHHVLVETTKLLA

Annotated regions:
phrase: VFDYWDEVDAYERTVEHRADGEDFFFVDGPPYTSGSAHMGTTWNKTLKDAYIRYHRMRGYNVTDRPGYDMHGLPIETKVEERLGFDNKKDIEEFGEQNFIDECKSFAEEQLEGLQEDFKSFGVWMDWDDPYKTVDPEYMEAAWWGFSKAHDRDLVEQGQRSISQCPRCETAIANNEVEYDHVEDPSIYVKFPLAEREGHLVIWTTTPWTVPANTFVAVDEEMTYQAIEVDTGDGTETLYVGEPCVEDVVDHGGYEDYEVVGEHEGSDLVGWRYEHPLREEVPEAPAFEGALEVYGADYVEADRTGLVHSAPGHGEVDFERGQELGLSVFCPVGPDGVYEDAAGDYAGQFVKDADAAIMDDLEAKGLLLSRGTVNHDYGHCWRCDTPIIQMVTDQWFITVTDIKDELLANMEESEWFPQEARDNRFRSFIEESPDWNVSRQRYWGIPIPIWTPDDWSGDVEEAIVVSTREELAERVDQDIDPESVDLHKDTVDDLTITADGTTYTRVPDVFDVWLDSSVASWGTLGYPGNEDDFEELWPADLIMEAHDQTRGWFWSQLGMGSAALGEAPYETVLMHGWALAEDGRKMSKSIGNIVAPQEAIDRHGADPMRLFLLTQNPQGDDMRF
type: DOMAIN
name: aa-tRNA-synth_Ia
description: Aminoacyl-tRNA synthetase, class Ia

phrase: DEWVLSRLSTVTAEMTDHWENFRQDKALDELLAFIVEDVSRFYIQVVRERMWEEETSESKLAAYATLHHVLVETTKLL
type: DOMAIN
name: M/V/L/I-tRNA-synth_anticd-bd
description: Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
Protein sequence:
MREIVHLQTGQCGNQIGAAFWQTISGEHGLDSNGVYNGTSELQLERMSVYFNEASGNKYVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLDVVRREAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATFSVVPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICMRTLKLSNPSYGDLNYLVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVSVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVAMKEVEDQMRNVQNKNSSYFVEWIPNNIQTALCAIPPRGLKMSSTFIGNSTSIQELFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDAGIDEEEEEYEEEAPVDEPLE

Annotated regions:
phrase: MSVYFNEASGNKYVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLDVVRREAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATFSVVPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDICMRTLKLSNPSYGDLNYLVSAVMSGVTTCLRFP
type: DOMAIN
name: Tubulin_FtsZ_GTPase
description: Tubulin/FtsZ, GTPase domain

phrase: PRLHFFMVGFAPLTSRGAHSFRAVSVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVAMKEVEDQMRNVQNKNSSYFVEWIPNNIQTALCAIPPRGLKMSSTFIGNSTSIQELFKR
type: DOMAIN
name: Tubulin/FtsZ_2-layer-sand-dom
description: Tubulin/FtsZ, 2-layer sandwich domain

phrase: EIVHLQTGQCGNQIGAAFWQTISGEHGLDSNGVYNGTSELQLERMSVYFNEASGNKYVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLDVVRREAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATFSVVPSPKVSDTVVEPYNATLSVHQLVENSDETFCIDNEALYDI
type: DOMAIN
name: Tubulin_FtsZ_GTPase
description: Tubulin/FtsZ, GTPase domain

phrase: GGGTGA
type: CONSERVED_SITE
name: Tubulin_CS
description: Tubulin, conserved site

phrase: MRE
type: BINDING_SITE
name: Beta-tubulin_BS
description: Beta tubulin, autoregulation binding site

phrase: LNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVSVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVAMKEVEDQMRNVQNKNSSYFVEWIPNNIQTALCAIPPRGLKMSSTFIGNSTSIQELFKRVG
type: DOMAIN
name: Tubulin/FtsZ_2-layer-sand-dom
description: Tubulin/FtsZ, 2-layer sandwich domain
Protein sequence:
MIKHIEAFLASKTISENTLKSYRYDLNQFLMLIDHKLSDEKLVLYQKSLNHLSASAKKRKFSTVNQFLHYLYKVNVTDRFFELSGKVSLPSTKVPFTYQLDDKRFYQKTQHPSGQLIALLILELGLLPSELSKLRLSEIDLDFQLIRVDNGSTVKVLSFSQAILKHLSEMEVGSTYLFENKGKPYSRQWFFNQLNAFLLEIGYDQLSAQSLREQFIIREKEKGTSLMELTQKLGLKSPITLEKYYRL

Annotated regions:
phrase: MIKHIEAFLASKTISENTLKSYRYDLNQFLMLIDHKLSDEKLVLYQKSLNHLSASAKKRKFSTVNQFLHYL
type: DOMAIN
name: CB
description: Core-binding (CB) domain

phrase: ASKTISENTLKSYRYDLNQFLMLIDHKLSDEKLVLYQKSLNHLSASAKKRKFSTVNQFLHYLY
type: DOMAIN
name: Integrase_SAM-like_N
description: Integrase, SAM-like, N-terminal

phrase: STKVPFTYQLDDKRFYQKTQHPSGQLIALLILELGLLPSELSKLRLSEIDLDFQLIRVDNGSTVKVLSFSQAILKHLSEMEVGSTYLFENKGKPYSRQWFFNQLNAFLLEIGYDQLSAQSLREQFIIREKEKGTSLMELTQKLGLKSPITLEKYYR
type: DOMAIN
name: Integrase_catalytic
description: Integrase, catalytic domain

phrase: QLIALLILELGLLPSELSKLRLSEIDLDFQLIRVDNGSTVKVLSFSQAILKHLSEMEVGSTYLFENKGKPYSRQWFFNQLNAFLLEIGYDQLSAQSLREQFIIREKEKGTSLMELTQKLGLKSPITLEKYY
type: DOMAIN
name: Integrase_catalytic
description: Integrase, catalytic domain
Protein sequence:
MVDVMDTDEEATGDAENRDEEVTAEEPIHDEVVDAVEIHEEEVKEDDDDCEGLVSDIVSIVEFLDQINGYRRTQQKECFNLVRRLKILIPFLDEIRGFESPSCKHFLNRLRKVFLAAKKLLETCSNGSKIYMALDGETMMTRFHSIYEKLNRVLVKAPFDELMISGDAKDEIDSLCKQLKKAKRRTDTQDIELAVDMMVVFSKTDPRNADSAIIERLAKKLELQTIDDLKTETIAIQSLIQDKGGLNIETKQHIIELLNKFKKLQGLEATDILYQPVINKAITKSTSLILPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNFALKNLIMQWCEKNNFKIPEKEVSPDSQNEQKDEVSLLVEALSSSQLEEQRRSVKQMRLLARENPENRVLIANAGAIPLLVQLLSYPDSGIQENAVTTLLNLSIDEVNKKLISNEGAIPNIIEILENGNREARENSAAALFSLSMLDENKVTIGLSNGIPPLVDLLQHGTLRGKKDALTALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLGMIDEALSILLLLASHPEGRQAIGQLSFIETLVEFIRQGTPKNKECATSVLLELGSNNSSFILAALQFGVYEYLVEITTSGTNRAQRKANALIQLISKSEQI

Annotated regions:
phrase: NGIPPLVDLLQHGTLRGKKDALTALFNLSLNSANKGRAIDAG
type: REPEAT
name: Armadillo
description: Armadillo

phrase: PHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNFALKNLIMQWCEK
type: DOMAIN
name: Ubox_domain
description: U-box domain

phrase: GAIPNIIEILENGNREARENSAAALFSLSMLDENKVTIGLSN
type: REPEAT
name: Armadillo
description: Armadillo

phrase: ILPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNFALKNLIMQWCEKNNF
type: DOMAIN
name: Ubox_domain
description: U-box domain

phrase: ENKVTIGLSNGIPPLVDLLQHGTLRGKKDALTALFNL
type: REPEAT
name: Armadillo
description: Armadillo

phrase: NPENRVLIANAGAIPLLVQLLSYPDSGIQENAVTTLLNL
type: REPEAT
name: Armadillo
description: Armadillo

phrase: HPEGRQAIGQLSFIETLVEFIRQGTPKNKECATSVLLELG
type: REPEAT
name: Armadillo
description: Armadillo

phrase: DEVNKKLISNEGAIPNIIEILENGNREARENSAAALFSLS
type: REPEAT
name: Armadillo
description: Armadillo

phrase: LDENKVTIGLSNGIPPLVDLLQHGTLRGKKDALTALFNLS
type: REPEAT
name: Armadillo
description: Armadillo

phrase: NPENRVLIANAGAIPLLVQLLSYPDSGIQENAVTTLLNLS
type: REPEAT
name: Armadillo
description: Armadillo

phrase: NSANKGRAIDAGIVQPLLNLLKDKNLGMIDEALSILLLLA
type: REPEAT
name: Armadillo
description: Armadillo

phrase: EFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNFALKNLIMQ
type: DOMAIN
name: Ubox_domain
description: U-box domain

phrase: GAIPLLVQLLSYPDSGIQENAVTTLLNLSIDEVNKKLISNEG
type: REPEAT
name: Armadillo
description: Armadillo

phrase: PHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLS
type: DOMAIN
name: RING-Ubox_PUB
description: PUB protein, U-box domain, plant
Protein sequence:
MSGCRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHARARSRGGRGRGRYSDRFSSRRPRNDRRNAPPVRTENRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIKLIEGSKRHSRSRSRSRSRTRSSSRSRSRSRSRSRKSYSRSRSRSRSRSRSKSRSVSRSPVPEKSQKRGSSSRSKSPASVDRQRSRSRSRSRSVDSGN

Annotated regions:
phrase: RVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCSERVTI
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: RLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIKL
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: NRLIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKIKLIEGS
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: CRVFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCSERVTIEHAR
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: LIVENLSSRVSWQDLKDFMRQAGEVTFADAHRPKLNEGVVEFASYGDLKNAIEKLSGKEINGRKI
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: VFIGRLNPAAREKDVERFFKGYGRIRDIDLKRGFGFVEFEDPRDADDAVYELDGKELCSER
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain
Protein sequence:
MSTKPTIAFTHLGCEKNRIDTEHIIGLLVQAGYEVDANEELADYVVVNTCSFIQAAREESVKTLVELAEANKKIVIAGCMAQHFPEELLAELPEAIALVGTGDYHKIVDVMQRVEKGDRVKEVTAEPTYIADETTPRYRTTSEGVAYVRIAEGCDYRCAFCIIPHLRGKARSRTIESIVVEAQKLADQGVKEIILISQITTNYGIDIYGQPKLADLLEALGKVDIPWIRMHYAYPTGLTPKVITAIQDTPNILPYLDLPLQHSHPEILRAMNRPWQGQVNDDIIKRIKTAMPNAVLRTSFIVGFPGETEEHHSHLVEFVKRHEFDHVGVFTFSPEEGTPAYNLPNQLPQEVMDARRQEIMEVQQSISWQQNQKLVGQLVDVLIEQENPQTGELIGRSPRFSPEVDGLIYVKGEARLGCIVPVMITDADIYDLYGCLISSAA

Annotated regions:
phrase: QKLVGQLVDVLIEQENPQTGELIGRSPRFSPEVDGLIYVKGEARLGCIVPVMITDADIYDLYGCLI
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: VGQLVDVLIEQENPQTGELIGRSPRFSPEVDGLIYVKGEARLGCIVPVMITDADIYDLYGCL
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: PTIAFTHLGCEKNRIDTEHIIGLLVQAGYEVDANEELADYVVVNTCSFIQAAREESVKTLVELAEANKKIVIAGCMAQHFPEELLAELPEAIALVGTGDYHKIVDVMQRVE
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: TTSEGVAYVRIAEGCDYRCAFCIIPHLRGKARSRTIESIVVEAQKLADQGVKEIILISQITTNYGIDIYGQPKLADLLEALGKVDIPWIRMHYAYPTGLTPKVITAIQDTPNILPYLDLPLQHSHPEILRAMNRPWQGQVNDDIIKRIKTAMPNAVLRTSFIVGFPGETEEHHSHLVEFVKRHEFDHVGVFTFSPEEGTPAYNLPNQLPQEVMDARRQEIMEVQQSISWQ
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VRIAEGCDYRCAFCIIPHLR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: GVAYVRIAEGCDYRCAFCIIPHLRGKARSRTIESIVVEAQKLADQGVKEIILISQITTNYGIDIYGQPKLADLLEALGKVDIPWIRMHYAYPTGLTPKVITAIQDTPNILPYLDLPLQHSHPEILRAMNRPWQGQVNDDIIKRIKTAMPNAVLRTSFIVGFPGETEEHHSHLVEFVKRHEFDHVGVFTFSPEEGTPAYNLPNQLPQEVMDARRQEIM
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: IAFTHLGCEKNRIDTEHIIGLLVQAGYEVDANEELADYVVVNTCSFIQAAREESVKTLVELAEANKKIVIAGCMAQHFPEELLAELPEAIALV
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: IAEGCDYRCAFCIIPHLRGKARSRTIESIVVEAQKLADQGVKEIILISQITTNYGIDIYGQPKLADLLEALGKVDIPWIRMHYAYPTGLTPKVITAIQDTPNILPYLDLPLQHSHPEILRAMNRPWQGQVNDDIIKRIKTAMPNAVLRTSFIVGFPGETEEHHSHLVEF
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MYQIFFFFLPLLHSYASAQTPPPFRNGDLVANFEPSLAVVTGVLAIMFALTFVLLVYAKCCHIDLRSGSGDRRRHDRRLRQGIFFNRSTASSDRFSGLDKTAIESLPLFRFSALKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCRDRVSMEEDSSVLTNGNSFRFLNQSEIREDSSLELYIEREEEEERIHREELSGSSRFSIGESFRKILKLGNKEKTLLDEHVNDKDEKKLMHKFNHRIVVSDVVFKNRWSNVSSSDLMFLNSEMVNSISSERFSSLDHVKRGDEEDQIGILRIKEEMEAKRMLENKLTSMTTMFSSENGDSGSKSRSVMIEPGRRSVSDITAVPRLSISIHGDCSGSAAETASALQNGGNETEERRRRLWLPIARKTAQWFANREKRSQINTTHQHFDV

Annotated regions:
phrase: CSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHATCPLC
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: CSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHATCPL
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: DCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHATCPLC
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type
Protein sequence:
MGRESVAVVTAPPSATAPGTASVATSLAPGFRFHPTDEELVSYYLKRKVLGQPVRFDAIGEVDIYKHEPWDLAVFSRLKTRDQEWYFYSALDKKYGNGARMNRATNRGYWKATGKDREIRRDILLLGMKKTLVFHSGRAPDGLRTNWVMHEYRLVEYETEKNGNLVQDAYVLCRVFHKNNIGPPSGNRYAPFMEEEWADDEGALIPGIDVKLRLEPPPVANGNDQMDQEIQSASKSLININEPPRETAPLDIESDQQNHHENDLKPEEHNNNNNYDENEETLKREQMEEEERPPRPVCVLNKEAPLPLLQYKRRRQSESNNNSSRNTQDHCSSTTTTVDNTTTLISSSAAATNTAISALLEFSLMGISDKKEKPQQPLRPHKEPLPPQTPLASPEEKVNDLQKEIHQMSVERETFKLEMMSAEAMISILQSRIDALRQENEELKKNNANGQ

Annotated regions:
phrase: LAPGFRFHPTDEELVSYYLKRKVLGQPVRFDAIGEVDIYKHEPWDLAVFSRLKTRDQEWYFYSALDKKYGNGARMNRATNRGYWKATGKDREIRRDILLLGMKKTLVFHSGRAPDGLRTNWVMHEYRLVEYETEKNGNLVQDAYVLCRVFH
type: DOMAIN
name: NAC-dom
description: NAC domain

phrase: PGFRFHPTDEELVSYYLKRKVLGQPVRFDAIGEVDIYKHEPWDLAVFSRLKTRDQEWYFYSALDKKYGNGARMNRATNRGYWKATGKDREIRRDILLLGMKKTLVFHSGRAPDGLRTNWVMHEYR
type: DOMAIN
name: NAC-dom
description: NAC domain
Protein sequence:
AGRLLGRLFPLSGVVAWLRRRGSVGNLLPNRLNLPAGMPGFLPLNQLCKFCDVEPSSCSGTGTCGSSCNITSICQLPEEVCVAIWRKNETGFFMETLCHDPSKSLYGLMLDDHNSSTCVMREKNTTSGTAHVCSCRAEECNDVLSFSPVVDPTPEDSLVSVVLVSLLPLLVMGVVIGAMFYWYRVHRPRMHSQEWERGIKKRKPKSGGLDCSDVCVIMMDDDGSDSSSTLANNLNHNTEPLPIELDQLVGKGRFAQVFKAKLKQNASDQFETVAVKIFPYEEYASWKNEKDIFSNSDLRHENILHFLTAEEKKAQRQYWLITAFHARGNLQEYLTHNVISWEELKILGSSLAQGVSHLHSDRLPCGRPKVAIVHRDLKSSNILVKSDLTCCLCDFGLGLQLDSSLSVDDLANSGQVGTARYMAPEVLEARLNLENTESFKQADIYSMALVLWETSRCDAVGEVKDYEPAYGSKVREHCVESMKDNVLRDRRRPEIPDTWLRRQGVAMMCGTIMECWDHDPEARLTAHCVAKRISEMEDELDKLSSHSSSTEKIPEELKIPTEV

Annotated regions:
phrase: IELDQLVGKGRFAQVFKAKLKQNASDQFETVAVKIFPYEEYASWKNEKDIFSNSDLRHENILHFLTAEEKKAQRQYWLITAFHARGNLQEYLTHNVISWEELKILGSSLAQGVSHLHSDRLPCGRPKVAIVHRDLKSSNILVKSDLTCCLCDFGLGLQLDSSLSVDDLANSGQVGTARYMAPEVLEARLNLENTESFKQADIYSMALVLWETSRCDAVGEVKDYEPAYGSKVREHCVESMKDNVLRDRRRPEIPDTWLRRQGVAMMCGTIMECWDHDPEARLTAHCVAKRI
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: LDQLVGKGRFAQVFKAKLKQNASDQFETVAVKIFPYEEYASWKNEKDIFSNSDLRHENILHFLTAEEKKAQRQYWLITAFHARGNLQEYLTHNVISWEELKILGSSLAQGVSHLHSDRLPCGRPKVAIVHRDLKSSNILVKSDLTCCLCDFGLGLQLDSSLSVDDLANSGQVGTARYMAPEVLEARLNLENTESFKQADIYSMALVLWETSRCDAVGEVKDYEPAYGSKVREHCVESMKDNVLRDRRRPEIPDTWLRRQGVAMMCGTIMECWDHDPEARLTAHC
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: QLCKFCDVEPSSCSGTGTCGSSCNITSICQLPEEVCVAIWRKNETGFFMETLCHDPSKSLYGLMLDDHNSSTCVMREKNTTSGTAHVCSCRAEECNDVLSFSPVV
type: DOMAIN
name: Transforming_GF_b_rcpt_2_ecto
description: Transforming growth factor beta receptor 2 ectodomain

phrase: IVHRDLKSSNIL
type: ACTIVE_SITE
name: Ser/Thr_kinase_AS
description: Serine/threonine-protein kinase, active site

phrase: VGKGRFAQVFKAKLKQNASDQFETVAV
type: BINDING_SITE
name: Protein_kinase_ATP_BS
description: Protein kinase, ATP binding site

phrase: IELDQLVGKGRFAQVFKAKLKQNASDQFETVAVKIFPYEEYASWKNEKDIFSNSDLRHENILHFLTAEEKKAQRQYWLITAFHARGNLQEYLTHNVISWEELKILGSSLAQGVSHLHSDRLPCGRPKVAIVHRDLKSSNILVKSDLTCCLCDFGLGLQLDSSLSVDDLANSGQVGTARYMAPEVLEARLNLENTESFKQADIYSMALVLWETSRCDAVGEVKDYEPAYGSKVREHCVESMKDNVLRDRRRPEIPDTWLRRQGVAMMCGTIMECWDHDPEARLTAHCVAKRISEMEDE
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain
Protein sequence:
MATAFRLWLLVSCGLLLAVACHGLQVGFYQKTCPKAEAIVRAEVQKAVRRDPGLGAGLLRMLFHDCFVEGCDASILLDPTQSNPRPEKKGPPNDASQRSYEVIDAAKRALEKACPGAVSCADVVAFAARDASDLLSGSRIRFSMPGGRLDGRRSQESQTGVLPPPFAGLGTLVNRFAAKDMTVEDLVVLSGAHSVGRSHCSSFVFERLTSGSDMDSTLANQLKRQCPANPGVGNDPVVAEDAVTPNVLDNQYYKNLLDRKVLFTSDATLMSSAQTAKMVSEFAKPDRTWEKKFAAAMVKLASIGVKTARDGEIRRNCRVVN

Annotated regions:
phrase: GLQVGFYQKTCPKAEAIVRAEVQKAVRRDPGLGAGLLRMLFHDCFVEGCDASILLDPTQSNPRPEKKGPPNDASQRSYEVIDAAKRALEKACPGAVSCADVVAFAARDASDLLSGSRIRFSMPGGRLDGRRSQESQTGVLPPPFAGLGTLVNRFAAKDMTVEDLVVLSGAHSVGRSHCSSFVFERLTSGSDMDSTLANQLKRQCPANPGVGNDPVVAEDAVTPNVLDNQYYKNLLDRKVLFTSDATLMSSAQTAKMVSEFAKPDRTWEKKFAAAMVKLASIGVKTARDGEIRRNCRV
type: DOMAIN
name: Secretory_peroxidase
description: Secretory peroxidase

phrase: VRAEVQKAVRRDPGLGAGLLRMLFHDCFVEGCDASILLDPTQSNPRPEKKGPPNDASQRSYEVIDAAKRALEKACPGAVSCADVVAFAARDASDLLSGSRIRFSMPGGRLDGRRSQESQTGVLPPPFAGLGTLVNRFAAKDMTVEDLVVLSGAHSVGRSHCSSFVFERLTSGSDMDSTLANQLKRQCPANPGVGNDPVVAEDAVTPNVLDNQYYKNLLDRKVLFTSDATLMSSAQTAKMVSEFA
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: DLVVLSGAHS
type: BINDING_SITE
name: Peroxidases_heam-ligand_BS
description: Peroxidases heam-ligand binding site

phrase: GAGLLRMLFHD
type: ACTIVE_SITE
name: Peroxidases_AS
description: Peroxidase, active site

phrase: GLQVGFYQKTCPKAEAIVRAEVQKAVRRDPGLGAGLLRMLFHDCFVEGCDASILLDPTQSNPRPEKKGPPNDASQRSYEVIDAAKRALEKACPGAVSCADVVAFAARDASDLLSGSRIRFSMPGGRLDGRRSQESQTGVLPPPFAGLGTLVNRFAAKDMTVEDLVVLSGAHSVGRSHCSSFVFERLTSGSDMDSTLANQLKRQCPANPGVGNDPVVAEDAVTPNVLDNQYYKNLLDRKVLFTSDATLMSSAQTAKMVSEFAKPDRTWEKKFAAAMVKLASIGVKTARDGEIRRNCRVV
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: GAGLLRMLFHDCFV
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: VSCADVVAFAARDASDL
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: DLVVLSGAHSVGRSH
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase

phrase: DAVTPNVLDNQYYKN
type: DOMAIN
name: Haem_peroxidase
description: Haem peroxidase
Protein sequence:
MHMAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESRVTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQIVDVTGQSKGKGFQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEIVSVDTERSVLVVKGAIPGATGGDVIVRPTIKA

Annotated regions:
phrase: FTVGQIVDVTGQSKGKGFQGGVK
type: CONSERVED_SITE
name: Ribosomal_uL3_CS
description: Large ribosomal subunit protein uL3, conserved site
Protein sequence:
MPSTTNTAAANVIEKKPVSFSNILLGACLNLSEVTTLGQPLEVVKTTMAANRNFTFLESVKHVWSRGGILGYYQGLIPWAWIEASTKGAVLLFVSAEAEYRFKSLGLNNFASGILGGVTGGVTQAYLTMGFCTCMKTVEITRHKSASAGGVPQSSWSVFKNIYKKEGIRGINKGVNAVAIRQMTNWGSRFGLSRLVEDGIRKITGKTNKDDKLNPFEKIGASALGGGLSAWNQPIEVIRVEMQSKKEDPNRPKNLTVGKTFKYIYQSNGLKGLYRGVTPRIGLGIWQTVFMVGFGDMAKEFVARMTGETPVAKH

Annotated regions:
phrase: EKIGASALGGGLSAWNQPIEVIRVEMQSKKEDPNRPKNLTVGKTFKYIYQSNGLKGLYRGVTPRIGLGIWQTVFMVGFGDMAKE
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier

phrase: NFASGILGGVTGGVTQAYLTMGFCTCMKTVEITRHKSASAGGVPQSSWSVFKNIYKKEGIRGINKGVNAVAIRQMTNWGSRFGLSRL
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier

phrase: NILLGACLNLSEVTTLGQPLEVVKTTMAANRNFTFLESVKHVWSRGGILGYYQGLIPWAWIEA
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier

phrase: LNPFEKIGASALGGGLSAWNQPIEVIRVEMQSKKEDPNRPKNLTVGKTFKYIYQSNGLKGLYRGVTPRIGLGIWQTVFMVGFGDMAKEFVA
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier
Protein sequence:
MADYNALATQFTQFYYQTFDSDRSQLSSLYREESMLSFEGAQLQGTKAIVEKLVSLPFQRVQHRISTLDAQPTGTTGSVIVMVTGELLLDEEQMAQRYSQVFHLVNNNGNYYVLNDLFRLNYG

Annotated regions:
phrase: DYNALATQFTQFYYQTFDSDRSQLSSLYREESMLSFEGAQLQGTKAIVEKLVSLPFQRVQHRISTLDAQPTGTTGSVIVMVTGELLLDEEQMAQRYSQVFHLVNNNGNYYVLNDLFRLN
type: DOMAIN
name: Nuclear_transport_factor_2_euk
description: Nuclear transport factor 2, eukaryote

phrase: ATQFTQFYYQTFDSDRSQLSSLYREESMLSFEGAQLQGTKAIVEKLVSLPFQRVQHRISTLDAQPTGTTGSVIVMVTGELLLDEEQMAQRYSQVFHLVNNNGNYYVLNDLFR
type: DOMAIN
name: NTF2_dom
description: Nuclear transport factor 2 domain

phrase: LATQFTQFYYQTFDSDRSQLSSLYREESMLSFEGAQLQGTKAIVEKLVSLPFQRVQHRISTLDAQPTGTTGSVIVMVTGELLLDEEQMAQRYSQVFHLVNNNGNYYVLNDLFR
type: DOMAIN
name: Nuclear_transport_factor_2_euk
description: Nuclear transport factor 2, eukaryote
Protein sequence:
MVTKWKKICLFDNYEISNTGKIRNSKSGKLLKFSMRKGYYCCSLSKNNTKKTFNVHRLVARIFINNPSKFNVVNHKDGNKLNNNSSNLEWTNYKHNANHAITNGLKKIFRKKIHQYDINGNYIDSFESINNAGLYTGINPKHISSTCLGKRKTCGGFIWEYDKKFSKEKKNGLPLENNNNYLITKDGRVFSKRANKYLKPKIDPDGYLLVSISTNNVNKQISIHRLVAMTYIENPNNYPYVNHIDNNKQNNNITNLEWCTPKQNMIHHIKTRTKIYTVKVAQYDMNYNVITSYASIKEAGEKTGIDKSSIVRVCKGKQKYAGKYIWSYIN

Annotated regions:
phrase: RKKIHQYDINGNYIDSFESINNAGLYTGINPKHISSTCLGKRKTCGGFIWEY
type: REPEAT
name: Intron_nuc_1_rpt
description: Intron encoded nuclease repeat

phrase: TVKVAQYDMNYNVITSYASIKEAGEKTGIDKSSIVRVCKGKQKYAGKYIWSY
type: REPEAT
name: Intron_nuc_1_rpt
description: Intron encoded nuclease repeat

phrase: KWKKICLFDNYEISNTGKIRNSKSGKLLKFSMRKGYYCCSL
type: DOMAIN
name: NUMOD4
description: NUMOD4

phrase: VNHIDNNKQNNNITNLEWCTPKQN
type: DOMAIN
name: HNH_nuc
description: HNH nuclease

phrase: KVAQYDMNYNVITSYASIKEAGEKTGIDKSSI
type: DOMAIN
name: NUMOD1
description: Nuclease-associated modular DNA-binding 1

phrase: KKIHQYDINGNYIDSFESINNAGLYTGINPKH
type: DOMAIN
name: NUMOD1
description: Nuclease-associated modular DNA-binding 1

phrase: TKKTFNVHRLVARIFINNPSKFNVVNHKDGNKLNNNSSNLEWTNYKHN
type: DOMAIN
name: HNH_nuc
description: HNH nuclease

phrase: VNKQISIHRLVAMTYIENPNNYPYVNHIDNNKQNNNITNLEWCTPKQN
type: DOMAIN
name: HNH_nuc
description: HNH nuclease
Protein sequence:
MKPAARRKARILALQAIYSWQLSGNAIADIEQQMLIENDVTKIDVEYFKDLASGVAVNYKQLDEAVSPHLTRPFDELDMVERAILRLSSYELKFREDVPYKVAINESIELAKMFGAEDSHKFVNGVLDKAVKHLRK

Annotated regions:
phrase: RKARILALQAIYSWQLSGNAIADIEQQMLIENDVTKIDVEYFKDLASGVAVNYKQLDEAVSPHLTRPFDELDMVERAILRLSSYELKFREDVPYKVAINESIELAKMFGAEDSHKFVNGVLDKAV
type: DOMAIN
name: NusB_RsmB_TIM44
description: NusB/RsmB/TIM44