nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MNKKFYITTLGCPKNTADSMSMHHSLLEEGFTPATFAEESDFHFINTCTFIQSATEETIQTILSAAQVKKQNHQKLVVVGCFAERYPDNISSEIPEVDLFFGTGRYAQAGKILREKFPDLSPPKREFNDSLLERLKLSSEIENYSKPYAYVKVSDGCNRGCSFCIIPSFRGKFRESPVEDILRDVDRAIRAGAKEICLVSQDTVYYGRNSEVLLDMVRKVAEIDSLEVLRLLYLYPDKKTEKLLRLMGETPKIAPYLESPLQHVSSKILKSMNRVGESSTFKDLFALAREVKPGLEIRTSFIIGYPGEEPGDVDQVLRFIEETRPEKVNLFSYSPQEGTKGAELKQTVSEKEKSRRINLIRDVHLAILEEIHESRIGQTYDAIVDSVENDQAVVRRFQDAPEMDEVVYVDDISLIPGMIGKIRIDSFYEYDMNGTWISK

Annotated regions:
phrase: NKKFYITTLGCPKNTADSMSMHHSLLEEGFTPATFAEESDFHFINTCTFIQSATEETIQTILSAAQVKKQNHQKLVVVGCFAERYPDNISSEIPEVDLFFGTGRYAQAGKILREKFPDLSPPKREFNDSLLERLKLSSEIENYSKPYAYVKVSDGCNRGCSFCIIPSFRGKFRESPVEDILRDVDRAIRAGAKEICLVSQDTVYYGRNSEVLLDMVRKVAEIDSLEVLRLLYLYPDKKTEKLLRLMGETPKIAPYLESPLQHVSSKILKSMNRVGESSTFKDLFALAREVKPGLEIRTSFIIGYPGEEPGDVDQVLRFIEETRPEKVNLFSYSPQEGTKGAELKQTVSEKEKSRRINLIRDVHLAILEEIHESRIGQTYDAIVDSVENDQAVVRRFQDAPEMDEVVYVDDISLIPGMIGKIRIDSFYEYDMNGTW
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VKVSDGCNRGCSFCIIPSFR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: KVSDGCNRGCSFCIIPSFRGKFRESPVEDILRDVDRAIRAGAKEICLVSQDTVYYGRNSEVLLDMVRKVAEIDSLEVLRLLYLYPDKKTEKLLRLMGETPKIAPYLESPLQHVSSKILKSMNRVGESSTFKDLFALAREVKPGLEIRTSFIIGYPGEEPGDVDQVLRF
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: PYAYVKVSDGCNRGCSFCIIPSFRGKFRESPVEDILRDVDRAIRAGAKEICLVSQDTVYYGRNSEVLLDMVRKVAEIDSLEVLRLLYLYPDKKTEKLLRLMGETPKIAPYLESPLQHVSSKILKSMNRVGESSTFKDLFALAREVKPGLEIRTSFIIGYPGEEPGDVDQVLRFIEETRPEKVNLFSYSPQEGTKGAELKQTVSEKEKSRRINLIR
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: KFYITTLGCPKNTADSMSMHHSLLEEGFTPATFAEESDFHFINTCTFIQSATEETIQTILSAAQVKKQNHQKLVVVGCFAERYPDNISSEIPEVDLFF
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: KKFYITTLGCPKNTADSMSMHHSLLEEGFTPATFAEESDFHFINTCTFIQSATEETIQTILSAAQVKKQNHQKLVVVGCFAERYPDNISSEIPEVDLFFGTGRYAQAGKILREKF
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: NYSKPYAYVKVSDGCNRGCSFCIIPSFRGKFRESPVEDILRDVDRAIRAGAKEICLVSQDTVYYGRNSEVLLDMVRKVAEIDSLEVLRLLYLYPDKKTEKLLRLMGETPKIAPYLESPLQHVSSKILKSMNRVGESSTFKDLFALAREVKPGLEIRTSFIIGYPGEEPGDVDQVLRFIEETRPEKVNLFSYSPQEGTKGAELKQTVSEKEKSRRINLIRDVHLAILE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: IGQTYDAIVDSVENDQAVVRRFQDAPEMDEVVYVDDISLIPGMIGKIRIDSFYEYDMNGTW
type: DOMAIN
name: TRAM_dom
description: TRAM domain
Protein sequence:
METTVRKQKKNLETKKPSIYSLQLHEMQDWLKEQGEPKFRAGQIFDWLYKKRVKNYEDMSNLSKGLREKLSNSFDITTLHTLVKQTSSDGTIKFLFQLYDGYSIETVLMRHEYGNSICVTTQVGCRIGCTFCASTLGGLKRNLEAGEIVAQVVEVQRALDESEERVSSLVVMGIGEPFDNYDNLMGFLRIINHEKGLHIGARHMTVSTSGIIPKIYKFAEEDLQINFAISLHAPNSELRSKLMPINRAYKLPDLMEAIKYYVNRTGRRITFEYGLFGGENDQVEHAEELAALLKGVKCHVNLIPVNYVPERDYVRTPREQIFLFEKTLKDRGVNVTIRREQGHDIDAACGQLRAKERKEETR

Annotated regions:
phrase: HEYGNSICVTTQVGCRIGCTFCASTLGGLKRNLEAGEIVAQVVEVQRALDESEERVSSLVVMGIGEPFDNYDNLMGFLRIINHEKGLHIGARHMTVSTSGIIPKIYKFAEEDLQINFAISLHAPNSELRSKLMPINRAYKLPDLMEAIKYYVNRTGRRITFEYGLFGGENDQVEHAEELAALLKGVKCHVNLIPVNYVPERDYVRTPREQIFLFEKTLKDRGVNVTIRREQGH
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TTQVGCRIGCTFCASTLGGLKRNLEAGEIVAQVVEVQRALDESEERVSSLVVMGIGEPFDNYDNLMGFLRIINHEKGLHIGARHMTVSTSGIIPKIYKFAEEDLQINFAISLHAPNSELRSKLMPINRAYKLPDLMEAIKYYVNRTGRRITFEYGLFGGENDQVEHA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: YSLQLHEMQDWLKEQGEPKFRAGQIFDWLYKKRVKNYEDMSNLSKGLREKLSNSF
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MNAVNEMAVPFVFTDNAAGKVKELIEEEGNPGLKLRVFVTGGGCSGFQYGFTFDEEVNEDDTTMEKNGVTLLIDPMSYQYLVGAEIDYTEGLEGSQFVIRNPNATSTCGCGSSFSA

Annotated regions:
phrase: FVIRNPNATSTCGCGSS
type: CONSERVED_SITE
name: FeS_cluster_insertion_CS
description: FeS cluster insertion, C-terminal, conserved site

phrase: FTDNAAGKVKELIEEEGNPGLKLRVFVTGGGCSGFQYGFTFDEEVNEDDTTMEKNGVTLLIDPMSYQYLVGAEIDYTEGLEGSQFVIRNPNATSTCGC
type: DOMAIN
name: FeS_biogenesis
description: FeS cluster biogenesis
Protein sequence:
MSGSNIERFVQSGLSGKLINEGQKLEQKLREFGVVPTGLSDDSRRVKKGDIFFAYPGTKQDGRIHINEAIELGCSVVIWERNGWSWNSSSQVPNIGLTNVRALMGEFAALFYGNPTGSMHVMAVTGTNGKTTCTNWLAEAFYLLGRASACIGTLGLKTPGRGLKTTYSGTNTTPDAITLQRTFRELQDAGVYCVSIEASSHALAQNRLDGTSIDIAIFTNLSHDHLDYHGSFELYGIAKAELFLFDTLSHAVINIDDDFGADLAKSLRSQNQRVVTYSMTKKNADICAGDLSLSKTGSVVRVSTLWGSGEIKSHIVGDFNVSNMLAVLGGLLCSGIEFSEACHVLETLRHPEGRLQRVGEEYNRYVYIDYAHTPDALSHVLASMKAFLPPNGRVITVFGAGGERDKDKRSLMGQAALEFSDVAIVTADNPRHENLDGIIEQIVFGNEDQFIIEPDRRSAIFRAIELANKYDIVCIAGKGHEKYQDVAGERIPFDDYLVAEECLKTFNSHLSECQGSINV

Annotated regions:
phrase: GRLQRVGEEYNRYVYIDYAHTPDALSHVLASMKAFLPPNGRVITVFGAGGERDKDKRSLMGQAALEFSDVAIVTADNPRHENLDGIIEQIVFGNEDQFIIEPDRRSAIFRAIELANKYDIVCIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: VTGTNGKTTCTNWLAEAFYLLGRASACIGTLGLKTPGRGLKTTYSGTNTTPDAITLQRTFRELQDAGVYCVSIEASSHALAQNRLDGTSIDIAIFTNLSHDHLDYHGSFELYGIAKAELFLFDTLSHAVINIDDDFGADLAKSLRSQNQRVVTYSMTKKNADICAGDLSLSKTGSVVRVSTLWGSGEIKSHIVGDFNVSNMLAV
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GLSDDSRRVKKGDIFFAYPGTKQDGRIHINEAIELGCSVVIWERNGWSWNSSSQVPNIGLTNVRALMGEFAALF
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain
Protein sequence:
MNVVILAAGMGKRMQSALPKVLHPLAGKPLLQHVIDTARSLTPGKLCVIYGHGGAAVPAVVEKWAAQCATPIETALQQPQLGTGHAVMQAVPQLDEDMPTMVLYGDVPLTGAESLRKLIDAAGHDKLAIMTVEQANPFGLGRIIRDGGRIVRIVEEKDATEAERAIREINSGIMVIPTRHLKKWLAALSNNNAQGEYYLTDIVAQAVADGVPVVSSQPSAEWEVAGVNSKVQLAELERRHQLNIANALLEKGVTLMDPSRIDVRGELVCGRDVTIDVGCVFEGRVELGDGVHIGAHNVLVNSRIAAGAQIKPFCHIEDAVVGEKSLIGPYARLRPGTELGEDVHVGNFVEIKNSQVAAHSKANHLAYVGDATVGSRVNIGAGTITCNYDGANKFRTVIEDDAFIGSDTQLVAPVTVGKGATLGAGTTLTKDAPAGKLTISRPKQLTIEGWSRPVKKK

Annotated regions:
phrase: DAVVGEKSLIGPYARLRPGTELGEDVHVGNFVEIK
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: TVIEDDAFIGSDTQLVAPVTVGKGATLGAGTTLT
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: VVILAAGMGKRMQSALPKVLHPLAGKPLLQHVIDTARSLTPGKLCVIYGHGGAAVPAVVEKWAAQCATPIETALQQPQLGTGHAVMQAVPQLDEDMPTMVLYGDVPLTGAESLRKLIDAAGHDKLAIMTVEQ
type: DOMAIN
name: MobA-like_NTP_Trfase
description: MobA-like NTP transferase

phrase: GVTLMDPSRIDVRGELVCGRDVTIDVGCVFEGRVELGDGVHIGAHNVLVNSRIAAGAQIKPFCHIEDAVVGEKSLIGPYARLRPGTELGEDVHVGNFVEIKNSQVAAHSKANHLAYVGDATVGSRVNIGAGTITCNYDGANKFRTVIEDDAFIGSDTQLVAPVTVGKGATLGAGTTLTKDAPAGKLTISRPK
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain
Protein sequence:
MAGGVIVANDGDGSAVDHGGRLTFSVVITCLVAASGGLIFGYDVGISGGVSTMEPFLRRFFPGVVRRMAEARPGNEYCVYDSQALTAFTSSLYVAGLVASLVASRVTRAMGRQAVMVMGGALFFAGGAVTGFAVNIAMLIVGRMLLGFGVGFTNQAAPLFLAEMAPTRWRGSLTAGFQFFLAVGVVIATVTNYFASRVPWGWRLSLGLAGAPAVVIFLGALFLTDTPSSLVMRGDTARARAALLRVRGAGADVEAELKGIVRAVEVARQGEDGAFRRMAARREYRPYLVFAVAMPMFFQLTGVIVISFFSPLVFRTVGFGSNAALMGNVILGAVNLVCLMLSTLVIDRYGRKVLFMVGGAIMIIAQVGVAWIMGAQVGKNGSEAMARPYAVAVVAFTCLHTAGFGWSWGPLGWVIPGEIFPVDIRSAGQAMNVSIGLGLTFVQTQSFLAMLCRFRYGTFAYYAAWVAVMTVFIAVFLPETKGVPLESMATVWARHWYWKRFAREQPKTSADEPTGTY

Annotated regions:
phrase: LLGFGVGFTNQAAPLFLAEMAPTRW
type: CONSERVED_SITE
name: Sugar_transporter_CS
description: Sugar transporter, conserved site

phrase: TCLVAASGGLIFGYDVGISGGVSTMEPFLRRFFPGVVRRMAEARPGNEYCVYDSQALTAFTSSLYVAGLVASLVASRVTRAMGRQAVMVMGGALFFAGGAVTGFAVNIAMLIVGRMLLGFGVGFTNQAAPLFLAEMAPTRWRGSLTAGFQFFLAVGVVIATVTNYFASRVPWGWRLSLGLAGAPAVVIFLGALFLTDTPSSLVMRGDTARARAALLRVRGAGADVEAELKGIVRAVEVARQGEDGAFRRMAARREYRPYLVFAVAMPMFFQLTGVIVISFFSPLVFRTVGFGSNAALMGNVILGAVNLVCLMLSTLVIDRYGRKVLFMVGGAIMIIAQVGVAWIMGAQVGKNGSEAMARPYAVAVVAFTCLHTAGFGWSWGPLGWVIPGEIFPVDIRSAGQAMNVSIGLGLTFVQTQSFLAMLCRFRYGTFAYYAAWVAVMTVFIAVFLPET
type: DOMAIN
name: MFS_dom
description: Major facilitator superfamily domain
Protein sequence:
MSSLTNPTTVMEEEEVPVAAPIRRGNKNPRRYSLVHQASCETQHHIGIRRQNTIQHRKQLTDQMREQKILQQLNDEGVEVIFAANDVSSIDFSVIVTSTDYISTFVSDILYNMKSAGVQICHVETRESKAVSGHDVLLDCRATKNQLIKAAELLTQNHVALTHFSIFSKKSVEKSQSMIWFPRHISELDQCSKCITKYEPTTDPRHPGHGDDEYIARRKFLNDQALEFKFGDEIGYVEYTEDEHATWKAVYEKLGGLHESHTCSVYRQNLKILQKEKVLTADRIPQIRDVNKFLQKKTGFELRPCSGLLSARDFLASLAFRVFQTTTYLRHHKSPHHSPEPDLIHELLGHVPMFSDPLLAQMSQDIGLMSLGASDEHIEKLATVYWFIVEFGLCKEDGKLKAIGAGLLSAYGELIHACSDAPEHKDFDPAVTAIQKYEDDDYQPLYFVADSIHDALAKLRKYASSMDRPFSVVYDPFTKSIETIQSSADLEKAFSRLSNDLSAITHAADRMKISITA

Annotated regions:
phrase: PDLIHELLGHV
type: BINDING_SITE
name: ArAA_hydroxylase_Fe/CU_BS
description: Aromatic amino acid hydroxylase, iron/copper binding site

phrase: PGHGDDEYIARRKFLNDQA
type: DOMAIN
name: Aromatic-AA_hydroxylase_C
description: Aromatic amino acid hydroxylase, C-terminal

phrase: TGFELRPCSGLLSARDFLASLA
type: DOMAIN
name: Aromatic-AA_hydroxylase_C
description: Aromatic amino acid hydroxylase, C-terminal

phrase: MSQDIGLMSLGASDEHIEK
type: DOMAIN
name: Aromatic-AA_hydroxylase_C
description: Aromatic amino acid hydroxylase, C-terminal

phrase: AIGAGLLSAYGELIHACS
type: DOMAIN
name: Aromatic-AA_hydroxylase_C
description: Aromatic amino acid hydroxylase, C-terminal

phrase: AIQKYEDDDYQPLYFVADS
type: DOMAIN
name: Aromatic-AA_hydroxylase_C
description: Aromatic amino acid hydroxylase, C-terminal

phrase: RPFSVVYDPFTKSIETIQ
type: DOMAIN
name: Aromatic-AA_hydroxylase_C
description: Aromatic amino acid hydroxylase, C-terminal

phrase: IFSKKSVEKSQSMIWFPRHISELDQCSKCITKYEPTTDPRHPGHGDDEYIARRKFLNDQALEFKFGDEIGYVEYTEDEHATWKAVYEKLGGLHESHTCSVYRQNLKILQKEKVLTADRIPQIRDVNKFLQKKTGFELRPCSGLLSARDFLASLAFRVFQTTTYLRHHKSPHHSPEPDLIHELLGHVPMFSDPLLAQMSQDIGLMSLGASDEHIEKLATVYWFIVEFGLCKEDGKLKAIGAGLLSAYGELIHACSDAPEHKDFDPAVTAIQKYEDDDYQPLYFVADSIHDALAKLRKYASSMDRPFSVVYDPFTKSIETIQSSADLEKAFSRLSNDLSAITHAADRM
type: DOMAIN
name: Aromatic-AA_hydroxylase_C
description: Aromatic amino acid hydroxylase, C-terminal

phrase: IWFPRHISELDQCSKCITKYEPTTDPRHPGHGDDEYIARRKFLNDQALEFKFGDEIGYVEYTEDEHATWKAVYEKLGGLHESHTCSVYRQNLKILQKEKVLTADRIPQIRDVNKFLQKKTGFELRPCSGLLSARDFLASLAFRVFQTTTYLRHHKSPHHSPEPDLIHELLGHVPMFSDPLLAQMSQDIGLMSLGASDEHIEKLATVYWFIVEFGLCKEDGKLKAIGAGLLSAYGELIHACSDAPEHKDFDPAVTAIQKYEDDDYQPLYFVADSIHDALAKLRKYASSMDRPFSVVYDPFTKSIETIQSSADLEKAFSRLSNDLSAITH
type: DOMAIN
name: Aromatic-AA_hydroxylase_C
description: Aromatic amino acid hydroxylase, C-terminal
Protein sequence:
MKRQALAAIIASMFALAACGGEPAAQTPAASAEAASSAAQTAAETPAGELPVIDAVTTHAPEVPPAIDRDYPAKVRVKMETVEKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATGQGGGAAATFTAPGRTSTFSFKALQPGLYIYHCAVAPVGMHIANGMYGLILVEPKEGLPKVDKEFYIVQGDFYTKGKKGAQGLQPFDMDKAIAEQPEYVVFNGHVGAIAGDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDIPGSYTLVDHSIFRAFNKGALGQLKVEGAENPEIMTQKLSDTAYAGNGAAPAASAPAASAPAASAPAKSDY

Annotated regions:
phrase: EKTMKMDDGVEYRYWTFDGDVPGRMIRVREGDTVEVEFSNNPSSTVPHNVDFHAATGQGGGAAATFTAPGRTSTFSFKALQPGLYIYHCAVAPVGMHIANGMYGLILVEPK
type: DOMAIN
name: Cu-oxidase-like_N
description: Multicopper oxidase-like, N-terminal
Protein sequence:
MMLKSITESFATAIHGLKVGHLTDRVIQRSKRMILDTLGAGFLGTTTEVFHIASQYSKIYSSNISSTVWGQPDIRLPPTYAAFVNGVAIHSMDFDDTWHPATHPSGAVLPVLTALAEALPRSPKFSGLDLLLAFNVGIEVQGRLLHFAKEANDMPKRFHPPSVVGTLGSAAAASKFLGLSSTKCREALAIAVSHAGAPMANAATQTKPLHIGNAAKHGIEAAFLAMLGLQGNKQVLDLEAGFGAFYANYSPKVLPSIASYSWLLDQQDVAFKRFPAHLSTHWVADAAASVRKHLVAERALLPTDYIKRIVLRIPNVQYVNRPFPVSEHEARHSFQYVACAMLLDGGITVPSFHECQINRPQVRELLSKVELEYPPDNLPSFNILYCEISVTLKDGATFTDRSDTFYGHWRKPLSQEDLEEKFRANASKMLSWDTVESLIKIVKNLEDLEDCSVLTTLLKGPSPPEVASNSPACNNSITNLS

Annotated regions:
phrase: SFATAIHGLKVGHLTDRVIQRSKRMILDTLGAGFLGTTTEVFHIASQYSKIYSSNISSTVWGQPDIRLPPTYAAFVNGVAIHSMDFDDTWHPATHPSGAVLPVLTALAEALPRSPKFSGLDLLLAFNVGIEVQGRLLHFAKEANDMPKRFHPPSVVGTLGSAAAASKFLGLSSTKCREALAIAVSHAGAPMANAATQTKPLHIGNAAKHGIEAAFLAMLGLQGNKQVLDLEAGFGAFYANY
type: DOMAIN
name: MmgE_PrpD_N
description: MmgE/PrpD, N-terminal

phrase: FPAHLSTHWVADAAASVRKHLVAERALLPTDYIKRIVLRIPNVQYVNRPFPVSEHEARHSFQYVACAMLLDGGITVPSFHECQINRPQVRELLSKVELEYPPDNLPSFNILYCEISVTLKDGATFTDRSDTFYGHWRKPLSQEDLEEKFRANASKMLSWDTVESLIKIVKNL
type: DOMAIN
name: MmgE_PrpD_C
description: MmgE/PrpD, C-terminal
Protein sequence:
MGIKLAVVGATGMVGRKFLDVLKERNFPIENLFLFASSKSAGNVINFNNKDYIVEELKEDSFDRGIDIALFSAGASTSLKYAPIAASKGCIVVDNSSAWRMNDDVPLVVPEVNPEDIKWHKGIIANPNCSTIQAVVALKPLDDKYRIKRIIYSTYQAVSGAGMGGYEDLINGIKGEKPKKFPHPIAYNIIPHIDVFMDNGYTKEEMKMINETRKILHRPDLKITATTVRVPVFYGHSESINVEFEKSFEIDELKEVLKQSKGIVLMDDVKNNVYPMPILAEGKNEVFVGRIRRDESIENGINMWVVADNIRKGAATNAVQIAELLIK

Annotated regions:
phrase: KLAVVGATGMVGRKFLDVLKERNFPIENLFLFASSKSAGNVINFNNKDYIVEELKEDSFDRGIDIALFSAGASTSLKYAPIAASKGCIVVDNSSAWRMNDDVPLVVPEVNPEDIKW
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: KLAVVGATGMVGRKFLDVLKERNFPIENLFLFASSKSAGNVINFNNKDYIVEELKEDSFDRGIDIALFSAGASTSLKYAPIAASKGCIVVDNSSAWRMNDDVPLVVPEVNPEDI
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: LKPLDDKYRIKRIIYSTYQAVSGAGMGGYEDLINGIKGEKPKKFPHPIAYNIIPHIDVFMDNGYTKEEMKMINETRKILHRPDLKITATTVRVPVFYGHSESINVEFEKSFEIDELKEVLKQSKGIVLMDDVKNNVYPMPILAEGKNEVFVGRIRRDESIENGINMWVVADNIR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain
Protein sequence:
MSSFRLDVVSLVPEVFDSLRGLGVIGRAFHAGIAELHTHNPRDYATDRYRKVDDEPYGGGAGMVLKPEPVFAAFEAIPVQPSRRVLLMTPQGKPLQQADLRRWATDYEQLVLLCGHYEGFDERIRSLADEEVSLGDFVLTGGELPAMTIINGTVRLRPGTVGTADSLVEESHSAGLLEHPHYTRPATFREMDVPAVLRSGDHGAIARWRAEQQKERTQLRRPDLWAQWQAEHPGNEG

Annotated regions:
phrase: RAFHAGIAELHTHNPRDYATDRYRKVDDEPYGGGAGMVLKPEPVFAAFEAIPVQPSRRVLLMTPQGKPLQQADLRRWATDYEQLVLLCGHYEGFDERIRSLADEEVSLGDFVLTGGELPAMTIINGTVRLRPGTVGTADSLVEESHSAGLLEHPHYTRPATFREMDVPAVLRSGDHGAIARWRAEQQKERTQLRR
type: DOMAIN
name: tRNA_MeTrfase_TRMD/TRM10
description: tRNA methyltransferase TRMD/TRM10-type domain
Protein sequence:
MILQDILYKVSIRSTKGNTQVDVNNLVIDSRAAAAGCCFIALPGTKTDGQVYIQDAVEKGAVAVVCESLPEKPDEAVTYIQVENAAEAAGYMSHNFFGEPSLKMKLVGVTGTNGKTTIATLLWKLFTALGYKCGLISTVQNQVGDKVFAATHTTPDAVSINALLKQMLDEGCVYVFMECSSHAIHQHRITGLQFTGALFTNITHDHLDYHKTFDEYIRVKKSWFDKLPSSAFAISNADDKRGAVMLQNTHARKYFYSLKTMAEYKGKILDNGLEGLHMTINDKEVYFRLIGEFNAYNLLAVYGAAICLDEDKDKVLQALSSLEGAEGRFDYRISKKDKITGIVDYAHTPDALLNVLATIKKLRRGNEKIITVVGCGGDRDKTKRPVMAEVACEYSDKVIFTSDNPRSEDPLAILKDMEAGLTVVTKKKAISIADRKEAIKTAVNLAGKDDIILVAGKGHEKYQDIKGVKHEFDDKQVLNEMFEMLEK

Annotated regions:
phrase: VTGTNGKTTIATLLWKLFTALGYKCGLISTVQNQVGDKVFAATHTTPDAVSINALLKQMLDEGCVYVFMECSSHAIHQHRITGLQFTGALFTNITHDHLDYHKTFDEYIRVKKSWFDKLPSSAFAISNADDKRGAVMLQNTHARKYFYSLKTMAEYKGKILDNGLEGLHMTINDKEVYFRLIGEFNAYNLLAVYGA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRFDYRISKKDKITGIVDYAHTPDALLNVLATIKKLRRGNEKIITVVGCGGDRDKTKRPVMAEVACEYSDKVIFTSDNPRSEDPLAILKDMEAGLTVVTKKKAISIADRKEAIKTAVNLAGKDDIILVAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: VNNLVIDSRAAAAGCCFIALPGTKTDGQVYIQDAVEKGAVAVVCESLPEKPDEAVTYIQVENAAEAAGYMS
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain
Protein sequence:
MWRETKLLLIDDNLDRSRDLAVILNFLGEDQLTCNSEDWREVAAGLSNSREALCVLLGSVESKGGAVELLKQLASWDEYLPILLIGEPAPADWPEELRRRVLASLEMPPSYNKLLDSLHRAQVYREMYDQARERGRSREPNLFRSLVGTSRAIQQVRQMMQQVADTDASVLILGESGTGKEVVARNLHYHSKRREGPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGGTLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQNVDVRIIAATHKNLEKMIEDGTFREDLYYRLNVFPIEMAPLRERVEDIALLLNELISRMEHEKRGSIRFNSAAIMSLCRHDWPGNVRELANLVERLAIMHPYGVIGVGELPKKFRHVDDEDEQLASSLREELEERAAINAGLPGMDAPAMLPAEGLDLKDYLANLEQGLIQQALDDAGGVVARAAERLRIRRTTLVEKMRKYGMSRRDDDLSDD

Annotated regions:
phrase: GLIQQALDDAGGVVARA
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: AERLRIRRTTLVEKMRKYGM
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: LANLEQGLIQQALDDAGGVVARAAERLRIRRTTLVEKMRK
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: GRFELANGGTLFLDE
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_2
description: Sigma-54 interaction domain, ATP-binding site 2

phrase: TDASVLILGESGTGKEVVARNLHYHSKRREGPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGGTLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQNVDVRIIAATHKNLEKMIEDGTFREDLYYRLNV
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LVGTSRAIQQVRQMMQQVADTDASVLILGESGTGKEVVARNLHYHSKRREGPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGGTLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQNVDVRIIAATHKNLEKMIEDGTFREDLYYRLNVFPIEMAPLRERVEDIALLLNELISRMEHEKRGSIRFNSAAIMSLCRHDWPGNVRELANLVERLA
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: VLILGESGTGKEV
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_1
description: Sigma-54 interaction domain, ATP-binding site 1

phrase: LVGTSRAIQQVRQMMQQVADTDASVLILGESGTGKEVVARNLHYHSKRREGPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGGTLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQNVDVRIIAATHKNLEKMIEDGTFREDLYYRLNVFPI
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: WPGNVRELA
type: CONSERVED_SITE
name: Sigma_54_int_dom_CS
description: Sigma-54 interaction domain, conserved site

phrase: KLLLIDDNLDRSRDLAVILNFLGEDQLTCNSEDWREVAAGLSNSREALCVLLGSVESKGGAVELLKQLASWDEYLPILLIGEPAPADWPEELRRRVLASLEMPPSYNKLLDSLHRAQ
type: DOMAIN
name: FleQ
description: Flagellar regulatory FleQ
Protein sequence:
MANHQIKAQRRKDEGKGASRRLRHAGMIPAIIYGGEQRPVSIQLNHEQIWLAQQNEWFYSSILDLNVDGAGAEKVLLRDLQRHPYRQLVMHVDFQRVSSDAKLSVAVPLHFINQATSPAGKVGGVVITHELNEVQVSCLPKDLPEFIEVDLSTLNVGHVIHLSDITFPIGVELSTRLDKEHDMAVVIAKHAVIEDDAPAEEGEGDSK

Annotated regions:
phrase: KLSVAVPLHFINQATSPAGKVGGVVITHELNEVQVSCLPKDLPEFIEVDLSTLNVGHVIHLSDITFPIGVELSTR
type: DOMAIN
name: Ribosomal_bL25_b-dom
description: Large ribosomal subunit protein bL25, beta domain

phrase: QIKAQRRKDEGKGASRRLRHAGMIPAIIYGGEQRPVSIQLNHEQIWLAQQNEWFYSSILDLNVDGAGAEKVLLRDLQRHPYRQLVMHVDFQ
type: DOMAIN
name: Ribosomal_L25_dom
description: Large ribosomal subunit protein bL25, L25 domain

phrase: IKAQRRKDEGKGASRRLRHAGMIPAIIYGGEQRPVSIQLNHEQIWLAQQNEWFYSSILDLNVDGAGAEKVLLRDLQRHPYRQLVMHVD
type: DOMAIN
name: Ribosomal_L25_dom
description: Large ribosomal subunit protein bL25, L25 domain
Protein sequence:
MLSKAHAKVNLSLDVIGKRKDGYHLLKMLMQTIDLYDLIEIKKIKKGIIIDCDREYIPKDRRNLAYKAAELFLDRYNIDSGVRIDITKNIPVAAGLAGGSTDAATVLKIMRDIFRPDISNEELKEIALDIGADVPFCIEGGTALCEGIGEKITPIKNFKNQILVLVKPNFGLSTKDVYNNLKVEKIYIHPNTTKLIQSIEEDNLKSVARNMRNVLENVTLRKYKALNSIKSNFIELGALGSMMSGSGPSVFGLFDDMLKAQICYDNMKEKYKEVFITRTI

Annotated regions:
phrase: NLAYKAAELFLDRYNIDSGVRIDITKNIPVAAGLAGGSTDAATVLKIMRDIFRPDISNEELKEIALDIGADVPFCIEG
type: DOMAIN
name: GHMP_kinase_N_dom
description: GHMP kinase N-terminal domain

phrase: IQSIEEDNLKSVARNMRNVLENVTLRKYKALNSIKSNFIELGALGSMMSGSGPSVFGLFDDMLKAQICYDNMKEKY
type: DOMAIN
name: GHMP_kinase_C_dom
description: GHMP kinase, C-terminal domain
Protein sequence:
MGTQKVTPALIFAITVATIGSFQFGYNTGVINAPEKIIKEFINKTLTDKGNAPPSEVLLTSLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLIVNLLAVTGGCFMGLCKVAKSVEMLILGRLVIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVVGILVAQIFGLEFILGSEELWPLLLGFTILPAILQSAALPFCPESPRFLLINRKEEENAKQILQRLWGTQDVSQDIQEMKDESARMSQEKQVTVLELFRVSSYRQPIIISIVLQLSQQLSGINAVFYYSTGIFKDAGVQEPIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAFCSTLMTVSLLLKDNYNGMSFVCIGAILVFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGLLFPSAAHYLGAYVFIIFTGFLITFLAFTFFKVPETRGRTFEDITRAFEGQAHGADRSGKDGVMEMNSIEPAKETTTNV

Annotated regions:
phrase: VIGLFCGLCTGFVPMYIGEISPTAL
type: CONSERVED_SITE
name: Sugar_transporter_CS
description: Sugar transporter, conserved site

phrase: SLFLVERAGRRTLHMI
type: CONSERVED_SITE
name: Sugar_transporter_CS
description: Sugar transporter, conserved site

phrase: AITVATIGSFQFGYNTGVINAPEKIIKEFINKTLTDKGNAPPSEVLLTSLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLIVNLLAVTGGCFMGLCKVAKSVEMLILGRLVIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVVGILVAQIFGLEFILGSEELWPLLLGFTILPAILQSAALPFCPESPRFLLINRKEEENAKQILQRLWGTQDVSQDIQEMKDESARMSQEKQVTVLELFRVSSYRQPIIISIVLQLSQQLSGINAVFYYSTGIFKDAGVQEPIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAFCSTLMTVSLLLKDNYNGMSFVCIGAILVFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGLLFPSAAHYLGAYVFIIFTGFLITFLAFTFFKVPET
type: DOMAIN
name: MFS_dom
description: Major facilitator superfamily domain
Protein sequence:
MPGGRASSSYGLSVTDDKDARIWERIKDHPCFSEQAHHYFARMHVAVAPACNIQCNYCNRKYDCTNESRPGVASVKLTPDQALRKVLAVASKVPELSVIGVAGPGDACYDWRKTAATFEGVAREIPDIKLCISTNGLALPDHVDELADMNVDHVTITINMVD

Annotated regions:
phrase: VAPACNIQCNYCNRKYDCTNESRPGVASVKLTPDQALRKVLAVASKVPELSVIGVAGPGDACYDWRKTAATFEGVAREIPDIKLCISTNGLALPDHVDELADMNVDHVTITINM
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VAPACNIQCNY
type: CONSERVED_SITE
name: MoaA_NifB_PqqE_Fe-S-bd_CS
description: MoaA/NifB/PqqE, iron-sulphur binding, conserved site

phrase: VAPACNIQCNYCNRKYDCTNESRPGVASVKLTPDQALRKVLAVASKVPELSVIGVAGPGDACYDWRKTAATFEGVAREIPDIKLCISTNGLALPDHVDELADMNVDHVTITIN
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: HHYFARMHVAVAPACNIQCNYCNRKYDCTNESRPGVASVKLTPDQALRKVLAVASKVPELSVIGVAGPGDACYDWRKTAATFEGVAREIPDIKLCISTNGLALPDHVDELADMNVDHVTITINMV
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MKYFSVYRKKDFFLYKKNILKIFNLTNSDLIEKIAKNILLNINHRYPFIKKVAIFCGSSFNATYGYMLAKFAYESGYSVVIYQCNLFKPISLLIQKLMLNKFRINFIYKTIDDCIDSNIDLIIDALIGIDNSDKDFSINIKKMSNIINKINNSLLPVISLDIPSGIDVDTGCIFQCGAIKSTLTITFLAIKLGLLILDGPDYCGKIICISFQSNYIYSDVKPTVYLLNNYLYKDIIFLKRKKNSHKGLFGRVLIIGGNYGMPGSVYLSAKAALRVGAGSVIVFTRSEYVNQFSFNLPEVMVYSFKDILQFIKLMKKSTVCVIGPGLTEDTWTRFLFSKVLLSNIATVVDASALQVLSKFKNCYKNNWILTPHVGEAASLLSCTVKEIQSDRYKALKRIKDKYGGAIILKGYDTLIYTDKEDIPYLCCEGNPGMASSGMGDVLSGVLGGLLSQGLSIRDSVILGVWIHGISGSQAAFINGERGLLASDLMFWLQKNINLFNR

Annotated regions:
phrase: KRKKNSHKGLFGRVLIIGGNYGMPGSVYLSAKAALRVGAGSVIVFTRSEYVNQFSFNLPEVMVYSFKDILQFIKLMKKSTVCVIGPGLTEDTWTRFLFSKVLLSNIATVVDASALQVLSKFKNCYKNNWILTPHVGEAASLLSCTVKEIQSDRYKALKRIKDKYGGAIILKGYDTLIYTDKEDIPYLCCEGNPGMASSGMGDVLSGVLGGLLSQGLSIRDSVILGVWIHGISGSQAAFINGERGLLASDLMFWLQK
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: NYLYKDIIFLKRKKNSHKGLFGRVLIIGGNYGMPGSVYLSAKAALRVGAGSVIVFTRSEYVNQFSFNLPEVMVYSFKDILQFIKLMKKSTVCVIGPGLTEDTWTRFLFSKVLLSNIATVVDASALQVLSKFKNCYKNNWILTPHVGEAASLLSCTVKEIQSDRYKALKRIKDKYGGAIILKGYDTLIYTDKEDIPYLCCEGNPGMASSGMGDVLSGVLGGLLSQGLSIRDSVILGVWIHGISGSQAAFINGERGLLASDLMFWLQKNINL
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: VLIIGGNYGMPGSVYLSAKAALRVGAGSVIVFTRSEYVNQFSFNLPEVMVYSFKDILQFIKLMKKSTVCVIGPGLTEDTWTRFLFSKVLLSNIATVVDASALQVLSKFKNCYKNNWILTPHVGEAASLLSCTVKEIQSDRYKALKRIKDKYGGAIILKGYDTLIYTDKEDIPYLCCEGNPGMASSGMGDVLSGVLGGLLSQGLSIRDSVILGVWIHGISGSQAAFINGERGLLASD
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: DLIEKIAKNILLNINHRYPFIKKVAIFCGSSFNATYGYMLAKFAYESGYSVVIYQCNLFKPISLLIQKLMLNKFRINFIYKTIDDCIDSNIDLIIDALIGIDNSDKDFSINIKKMSNIINKINNSLLPVISLDIPSGIDVDTGCIFQCGAIKSTLTITFLAIKL
type: DOMAIN
name: YjeF_N_dom
description: YjeF N-terminal domain

phrase: YRKKDFFLYKKNILKIFNLTNSDLIEKIAKNILLNINHRYPFIKKVAIFCGSSFNATYGYMLAKFAYESGYSVVIYQCNLFKPISLLIQKLMLNKFRINFIYKTIDDCIDSNIDLIIDALIGIDNSDKDFSINIKKMSNIINKINNSLLPVISLDIPSGIDVDTGCIFQCGAIKSTLTITFLAIKLGLLILDGPDYCGKIICISFQSNYIYS
type: DOMAIN
name: YjeF_N_dom
description: YjeF N-terminal domain

phrase: NYLYKDIIFLKRKKNSHKGLFGRVLIIGGNYGMPGSVYLSAKAALRVGAGSVIVFTRSEYVNQFSFNLPEVMVYSFKDILQFIKLMKKSTVCVIGPGLTEDTWTRFLFSKVLLSNIATVVDASALQVLSKFKNCYKNNWILTPHVGEAASLLSCTVKEIQSDRYKALKRIKDKYGGAIILKGYDTLIYTDKEDIPYLCCEGNPGMASSGMGDVLSGVLGGLLSQGLSIRDSVILGVWIHGISGSQAAFINGERGLLASDLMFWLQKNINLFN
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: KNSHKGLFGRVLIIGGNYGMPGSVYLSAKAALRVGAGSVIVFTRSEYVNQFSFNLPEVMVYSFKDILQFIKLMKKSTVCVIGPGLTEDTWTRFLFSKVLLSNIATVVDASALQVLSKFKNCYKNNWILTPHVGEAASLLSCTVKEIQSDRYKALKRIKDKYGGAIILKGYDTLIYTDKEDIPYLCCEGNPGMASSGMGDVLSGVLGGLLSQGLSIRDSVILGVWIHGISGSQAAFINGERGLLASD
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase