nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MLKLIIPTIMLLPLTWLSKTHMIWINTTTHSLIISSIPLLFLNQTNSNLYSYSLLFSSDPLSTPLLMLTTWLLPLMIMASQHHLSNEPPSRKKLYLTMLISLQISLIMTFTATELIMFYILFETTLIPTLVIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIHTYNTLGSLNIVLLTLTARELTDSWSNSLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLIPILNPLTKHMAYPFIMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVVAAILIQTPWSFTGATTLMIAHGLTSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMALWWLLASLTNLALPPTINLLGELSVLMAMFSWSNITILLTGLNMLITTLYSLYMFTTTQRGTPTHHTNNMKPSFTRENTLMLMHLSPILLLSLNPSIIAGFAY

Annotated regions:
phrase: ATELIMFYILFETTLIPTLVIITRWGNQPERLNAGTYFLFYTLVGSLPLLIALIHTYNTLGSLNIVLLTLTARELTDSWSNSLMWLAYTMAFMVKMPLYGLHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRLIPILNPLTKHMAYPFIMLSLWGMIMTSSICLRQTDLKSLIAYSSVSHMALVVAAILIQTPWSFTGATTLMIAHGLTSSLLFCLANSNYERTHSRIMILSQGLQTLLPLMALWWLLASLTNLALPPTINLLGELSVLMAMFSWSNITILLTGL
type: DOMAIN
name: ND/Mrp_TM
description: NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domain

phrase: MLKLIIPTIMLLPLTWLSKTHMIWINTTTHSLIISSIPLLFLNQTNSNLYSYSLLFSSDPLSTPLLMLTTWLLPLMIMASQHHLSNEPPSRKKLYLTMLISLQISLIM
type: DOMAIN
name: NADH4_N
description: NADH:ubiquinone oxidoreductase chain 4, N-terminal
Protein sequence:
MAAEMDWDKTVGAAEDVRRIFEHIPAILVGLEGPDHRFVAVNAAYRGFSPLLDTVGQPAREVYPELEGQQIYEMLDRVYQTGEPQSGSEWRLQTDYDGSGVEERYFDFVVTPRRRADGSIEGVQLIVDDVTSRVRARQAAEARVEELSERYRNVRDSATVMQQALLAASVPVVPGADIAAEYLVAAEDTAAGGDWFDALALGDRLVLVVGDVVGHGVEAAAVMSQLRTALRMQISAGYTVVEALEAVDRFHKQVPGSKSATMCVGSLDFTSGEFQYCTAGHPPPLLVTADASARYVEPTGAGPLGSGTGFPVRSEVLNIGDAILFYTDGLIERPGRPLEASTAEFADLAASIASGSGGFVLDAPARPIDRLCSDTLELLLRSTGYNDDVTLLAMQRRAPTPPLHITLDATINAARTVRAQLREWLAEIGADHSDIADIVHAISEFVENAVEHGYATDVSKGIVVAAALAGDGNVRASVIDRGQWKDHRDGARGRGRGLAMAEALVSEARIMHGAGGTTATLTHRLSRPARFVTDTMVRRAAFQQTIDSEFVSLVESGRIVVRGDVDSTTAATLDRQIAVESRSGIAPVTIDLSAVTHLGSAGVGALAAACDRARKQGTECVLVAPPGSPAHHVLSLVQLPVVGADTEDIFAQE

Annotated regions:
phrase: DRLVLVVGDVVGHGVEAAAVMSQLRTALRMQISAGYTVVEALEAVDRFHKQVPGSKSATMCVGSLDFTSGEFQYCTAGHPPPLLVTADASARYVEPTGAGPLGSGTGFPVRSEVLNIGDAILFYTDGLIERPGRPLEASTAEFADLAASIASGSGGFVLDAPARPIDRLCSDTLELLLRSTGYNDDVTLLAMQ
type: DOMAIN
name: PPM-type_phosphatase-like_dom
description: PPM-type phosphatase-like domain

phrase: FEHIPAILVGLEGPDHRFVAVNAAYRGFSPLLDTVGQPAREVYPELEGQQIYEMLDRVYQTGEPQSGSEWRLQTDYDGSGVEERYFDFVVTPRRRADGSIEGVQLIVDDVTSRV
type: DOMAIN
name: PAS_4
description: PAS fold-4

phrase: RRIFEHIPAILVGLEGPDHRFVAVNAAYRGFSPLLDTVGQPAREVYPELEGQQIYEMLDRVYQTGEPQSGSEWRLQTDYDGSGVEERYFDFVVTPRRRADGSIEGVQLIVDDVTSRVRARQ
type: DOMAIN
name: PAS
description: PAS domain

phrase: SGSEWRLQTDYDGSGVEERYFDFVVTPRRRADGSIEGVQLIVDDVTSRVRARQAAE
type: DOMAIN
name: PAS-assoc_C
description: PAS-associated, C-terminal

phrase: ATINAARTVRAQLREWLAEIGADHSDIADIVHAISEFVENAVEHGYATDVSKGIVVAAALAGDGNVRASVIDRGQWKDHRDGARGRGRGLAMAEALVSEARIMHGAGGTTATL
type: DOMAIN
name: HATPase_dom
description: Histidine kinase/HSP90-like ATPase domain

phrase: VPGADIAAEYLVAAEDTAAGGDWFDALALGDRLVLVVGDVVGHGVEAAAVMSQLRTALRMQISAGYTVVEALEAVDRFHKQVPGSKSATMCVGSLDFTSGEFQYCTAGHPPPLLVTADASARYVEPTGAGPLGSGTGFPVRSEVLNIGDAILFYTDGLIERPGRPLEASTAEFADLAASIASGSGGFVLDAPARPIDRLCSDTLELLLRSTGYNDDVTLLAMQ
type: DOMAIN
name: PPM-type_phosphatase-like_dom
description: PPM-type phosphatase-like domain

phrase: DIAAEYLVAAEDTAAGGDWFDALALGDRLVLVVGDVVGHGVEAAAVMSQLRTALRMQISAGYTVVEALEAVDRFHKQVPGSKSATMCVGSLDFTSGEFQYCTAGHPPPLLVTADASARYVEPTGAGPLGSGTGFPVRSEVLNIGDAILFYTDGLIERPGRPLEASTAEFADLAASIASGSGGFVLDAPARPIDRLCSDTLELLLRSTGYNDDVTLLAMQ
type: DOMAIN
name: PPM-type_phosphatase-like_dom
description: PPM-type phosphatase-like domain

phrase: VVRGDVDSTTAATLDRQIAVESRSGIAPVTIDLSAVTHLGSAGVGALAAACDRARKQGTECVLVAPPGSPAH
type: DOMAIN
name: STAS_dom
description: STAS domain

phrase: IVVRGDVDSTTAATLDRQIAVESRSGIAPVTIDLSAVTHLGSAGVGALAAACDRARKQGTECVLVAPPGSPAHHVLSLVQLPVVGADTEDIFAQ
type: DOMAIN
name: STAS_dom
description: STAS domain
Protein sequence:
MDAKLLAVMAALTVLVFVPPSQAKPISLVERCYCRSTVNSVPRGYIRELRFIHTPNCPFQVIAKLKNNREVCLNPEIRWMQQYLKNAINKMKKSKQGN

Annotated regions:
phrase: VERCYCRSTVNSVPRGYIRELRFIHTPNCPFQVIAKLKNNREVCLNPEIRWMQQYLKNAI
type: DOMAIN
name: CXC_Chemokine_domain
description: CXC Chemokine domain

phrase: VERCYCRSTVNSVPRGYIRELRFIHTPNCPFQVIAKLKNNREVCLNPEIRWMQQYLKN
type: DOMAIN
name: Chemokine_IL8-like_dom
description: Chemokine interleukin-8-like domain

phrase: ERCYCRSTVNSVPRGYIRELRFIHTPNCPFQVIAKLKNNREVCLNPEIRWMQQYLK
type: DOMAIN
name: Chemokine_IL8-like_dom
description: Chemokine interleukin-8-like domain
Protein sequence:
MFEKIEAAIQRLKEGALIILTDDADREAEGDLVGLASLVSAEKVNFMTQKARGLICAPISKEIAEQLDLSDMIAENTDAFGTAFTVSVDHNTTSTGISAFDRAKTIQALSLEESKALDFKRPGHMFPLIGKDGGVLERRGHTEGALDLARLAGSRPAAYICEILKEDGHMARREDLEKLAEEWQMPLISIEELAVYLRFQGAVKTSLPTRCGYFDLTLFEDGEGKENLLLTKGNLAEETAPLFRIHSECATGDIFSSVRCDCGEQLEAAMKEIEKEGSGAILYLRQEGRGIGLKNKLKAYQLQDAGLDTYDANLELGFAADERHYDFAKTVLEYLGLKKVRLLTNNPDKVRQLKAAGIEVTERVPLQVPARKENITYLKTKKEKFHHDIQV

Annotated regions:
phrase: VKTSLPTRCGYFDLTLFEDGEGKENLLLTKGNLAEETAPLFRIHSECATGDIFSSVRCDCGEQLEAAMKEIEKEGSGAILYLRQEGRGIGLKNKLKAYQLQDAGLDTYDANLELGFAADERHYDFAKTVLEYLGLKKVRLLTNNPDKVRQLKAAGIEVTERV
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MAIISEMEEARPSMVPFTASFDPSNPIAFLEKVLDVIGKESNFLKKDTAEKEIVAAVMAAKQRLREAEKKKLEKESVKSMEVEKPKKDSLKPTELEKPKEESLMATDPMEIEKPKEEKESGPIVPNKGNGLDFEKYSWGQNLQEVTINIPMPEGTKSRSVTCEIKKNRLKVGLKGQDLIVDGEFFNSVKPDDCFWNIEDQKMISVLLTKQDQMEWWKYCVKGEPEIDTQKVEPETSKLGDLDPETRASVEKMMFDQRQKQMGLPRSDEIEKKDMLKKFMAQNPGMDFSNAKFN

Annotated regions:
phrase: EKYSWGQNLQEVTINIPMPEGTKSRSVTCEIKKNRLKVGLKGQDLIVDGEFFNSVKPDDCFWNIEDQKMISVLLT
type: DOMAIN
name: CS_dom
description: CS domain

phrase: LDFEKYSWGQNLQEVTINIPMPEGTKSRSVTCEIKKNRLKVGLKGQDLIVDGEFFNSVKPDDCFWNIEDQKMISVLLTKQDQMEWWKYC
type: DOMAIN
name: CS_dom
description: CS domain
Protein sequence:
MARENKKELIGKVVSDKMSKTVVVEIVQRKMHPIYHKYLKVSRRVKAHDEREESKLGDKVKIVESRPISKEKRWRLIEILERSK

Annotated regions:
phrase: GDKVKIVESRPI
type: CONSERVED_SITE
name: Ribosomal_uS17_CS
description: Small ribosomal subunit protein uS17, conserved site
Protein sequence:
MADRPIRVRYAPSPTGHLHIGNARTALFNYLFARHNNGTLVLRIEDTDTKRNVADGEKSQMENLHWLGIDWDEGPDKGGDFGPYRQSERKDIYDKLIKQLVDKGFAYESYRTEEELKADREAQKARHEMPHYEYEYEGMTDAEKADAIAAAKAKGLEPVIRFHIPMDKTYEWDDIVKGKISIDANTLGGDFVIQKRDGMPTYNFAVVVDDHMMQISHVLRGDDHIANTPKQLAIYDAFGWEPPIFGHMTLIINGATGKKLSKRDETVLQFIEQYRELGYLPDAMFNFITLLGWSPVGEDEIFTKKEFIKQFDPKRLSKSPARFDQKKLEWVNNQYIKAKQKTNPNELMSLSLANLIEDGKIHSDPDPKTIEWARQLISLYTDQMSYTAQISKLADIFFDKATDLTDDERKELADDNAKPVIEAFAKKIRALDTFDAYSIGGIVNEVKQETKVKGRKLYMPIRIAATLRMHGPQLAETIELMGRDQVLKNVDLVTGQL

Annotated regions:
phrase: IRVRYAPSPTGHLHIGNARTALFNYLFARHNNGTLVLRIEDTDTKRNVADGEKSQMENLHWLGIDWDEGPDKGGDFGPYRQSERKDIYDKLIKQLVDKGFAYESYRTEEELKADREAQKARHEMPHYEYEYEGMTDAEKADAIAAAKAKGLEPVIRFHIPMDKTYEWDDIVKGKISIDANTLGGDFVIQKRDGMPTYNFAVVVDDHMMQISHVLRGDDHIANTPKQLAIYDAFGWEPPIFGHMTLIINGATGKKLSKRDETVLQFIEQYRELGYLPDAMFNFITLLGWSPVGEDEIFTKKEFIKQFDPKRLSKSPARFDQKKLEWVNNQYI
type: DOMAIN
name: GluRS_core
description: Glutamyl-tRNA synthetase

phrase: KTIEWARQLISLYTDQMSYTAQISKLADIFFDKATDLTDDERKELADDNAKPVIEAFAKKIRALDTFDAYSIGGIVNEVKQETKVKGRKLYMPIRIAATLRMHGPQLAETIELMGRDQVL
type: DOMAIN
name: aa-tRNA-synth_I_cd-bd
description: Aminoacyl-tRNA synthetase, class I, anticodon-binding

phrase: PSPTGHLHIGN
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: IRVRYAPSPTGHLHIGNARTALFNYLFARHNNGTLVLRIEDTDTKRNVADGEKSQMENLHWLGIDWDEGPDKGGDFGPYRQSERKDIYDKLIKQLVDKGFAYESYRTEEELKADREAQKARHEMPHYEYEYEGMTDAEKADAIAAAKAKGLEPVIRFHIPMDKTYEWDDIVKGKISIDANTLGGDFVIQKRDGMPTYNFAVVVDDHMMQISHVLRGDDHIANTPKQLAIYDAFGWEPPIFGHMTLIINGATGKKLSKRDETVLQFIEQYRELGYLPDAMFNFITLLGWSPVGEDEIFTKKEFIKQFDPKRLSKSPARFDQKKLE
type: DOMAIN
name: Glu/Gln-tRNA-synth_Ib_cat-dom
description: Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain
Protein sequence:
MIHGIGTDIVYIPRVSRILQKYGEKFLNRIYTEKEIELSRKYNSQEMRARYFAKRFAAKEAFVKARGSGQGIIMKDIEIYNDVRGKPYLTVSKDFISKIHLSLSDDGDYATAFVVICV

Annotated regions:
phrase: GIGTDIVYIPRVSRILQKYGEKFLNRIYTEKEIELSRKYNSQEMRARYFAKRFAAKEAFVKARGSGQGIIMKDIEIYNDVRGKPYLTVSKDFISKIHLSLSDDGDYATAF
type: DOMAIN
name: 4-PPantetheinyl_Trfase_dom
description: 4'-phosphopantetheinyl transferase domain

phrase: MIHGIGTDIVYIPRVSRILQKYGEKFLNRIYTEKEIELSRKYNSQEMRARYFAKRFAAKEAFVKARGSGQGIIMKDIEIYNDVRGKPYLTVSKDFISKIHLSLSDDGDYATAFVV
type: DOMAIN
name: Ppantetheine-prot_Trfase_dom
description: Phosphopantetheine-protein transferase domain
Protein sequence:
MTDKRKDSSGKLLYCSFCGKSQHEVKKLIAGPSVYICDECVDLCVDIIREEIKELAPHHERSELPTPHEIRKHLDDYVIGQELAKKVLAVAVYNHYKRLRNGDKADGVELGKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKITRKSENPSITRDVSGEGVQQALLKLVEGTVASVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVVAQRLNTHSGIGFGAEVKSQNEKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLGELNEDALIQILQEPKNALTKQYQALFKLEGVDLEFRKDALTAIAKKAMSRKTGARGLRSIVEAALLDTMYDLPSFENAEKVVIDENVINGKSEPLIIYSQPENQASGE

Annotated regions:
phrase: GKSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKITRKSENPSITRDVSGEGVQQALLKLVEGTVASVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVVAQRLNTHSGIGFGAEVKSQNEKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLGELNEDALIQILQEPKNALTKQYQALFKLEGVDLEFRKDALTAIAKKAMSRKTGARGLRSIVEAALLDTMYDLPSFENAEKVVIDENVINGKSEPLIIYSQP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LNEDALIQILQEPKNALTKQYQALFKLEGVDLEFRKDALTAIAKKAMSRKTGARGLRSIVEAALLDTMYDLPSFENA
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal

phrase: KSNILLIGPTGSGKTLLAETLARYLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKITRKSENPSITRDVSGEGVQQALLKLVEGTVASVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVVAQRLNTHSGIGFGAEVKSQNEKASEGELLAQVEPEDLIKFGLIPEFIGRLP
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: LNEDALIQILQEPKNALTKQYQALFKLEGVDLEFRKDALTAIAKKAMSRKTGARGLRSIVEAALLDTMYDLPSFENAEKVVIDENVINGKSEPLI
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal

phrase: YCSFCGKSQHEVKKLIAGPSVYICDECVDLCVDIIR
type: DOMAIN
name: Znf_CppX_C4
description: Zinc finger, ClpX C4-type

phrase: LLYCSFCGKSQHEVKKLIAGPSVYICDECVDLCVDIIRE
type: DOMAIN
name: Znf_CppX_C4
description: Zinc finger, ClpX C4-type

phrase: TDKRKDSSGKLLYCSFCGKSQHEVKKLIAGPSVYICDECVDLCVDIIREEIKEL
type: DOMAIN
name: Znf_CppX_C4
description: Zinc finger, ClpX C4-type
Protein sequence:
MASLPDTNKLLRNFSRCRNWEERYLYMIELGAKLPPLTDEQRQPENLIAGCQSQVWILLRMNHQNKVEFIGDSDAAIVKGLVAIVFILFQGKTTQEILDLDVTEYFGKLSLEQHLTPSRTQGLHAMIHAIRNRTSKMV

Annotated regions:
phrase: DTNKLLRNFSRCRNWEERYLYMIELGAKLPPLTDEQRQPENLIAGCQSQVWILLRMNHQNKVEFIGDSDAAIVKGLVAIVFILFQGKTTQEILDLDVTEYFGKLSLEQHLTPSRTQGLHAMIHAIRNRTSK
type: DOMAIN
name: Fe-S_metab-assoc_dom
description: Fe-S metabolism associated domain, SufE-like

phrase: RNFSRCRNWEERYLYMIELGAKLPPLTDEQRQPENLIAGCQSQVWILLRMNHQNKVEFIGDSDAAIVKGLVAIVFILFQGKTTQEILDLDVTEYFGKLSLEQHLTPSRTQGLHAMIHAIR
type: DOMAIN
name: Fe-S_metab-assoc_dom
description: Fe-S metabolism associated domain, SufE-like
Protein sequence:
MAVSTGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQTYNN

Annotated regions:
phrase: PRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQTYN
type: DOMAIN
name: UBQ-conjugat_E2_core
description: Ubiquitin-conjugating enzyme E2, catalytic core domain

phrase: EDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENM
type: DOMAIN
name: UBQ-conjugat_E2_core
description: Ubiquitin-conjugating enzyme E2, catalytic core domain
Protein sequence:
MNALELEQILNHKLNSQAISDYAPNGLQVEGKKDIKKIITGVTASQALIEYAVSQNADAILVHHGYFWKSENPCIRGMKGKRIKTLLVNDINLYGYHLPLDVHPELGNNARLAALLEIEDLQPLEQGTVSIPVYGTLKTPLTSDAFAARIEQVLKRKPLVCSDNAPHLIRTVGICTGGGQSYIDLAANQGVDAFISGEVSEQTIHSAREQGIHFFAAGHHATERYGIKALGEWLSQHYDLEVEFKDIDNPA

Annotated regions:
Protein sequence:
MSNSNIDNDLDKIDSLLKKAKSKKIPVTYDDINKALPLNKNPSIRQLEEAILKFSDAGVDILESNEDDEIKLDIGMDEEFKLSTNVDNEPEDEVEEENIGTTDDPVRLYLKDMGGVDLLTRENEVEIAKRIEEGRKTMTASLCKSPIAMRCFIVWYEDLVNEKMLLRDLIDLEANMLHDETPENDEEHSSETEGEEHEDNHLSMSRVETQILPNIIERMKKISFICEELLIEAKKCYEKSFEPKVLQNSKKYNNNLELLINEVSEIHFNSKRTEEILGKMYGINRDLINKEIAFLKLAEKYGVTRQNFLDEYIGSVINAAWKEKMLKNKKVAWKELITKESDYIDQMIAELSVIESNTGLLVNDFKKLVNTIQKSERQTLQAKKDMIEANLRLVISIAKKYANRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKILRTSRQMLNELGYEPTATEIANRLSMPLDKVRKVMKIAKEPISLENPVGDDSDGGQLGDFIEDKNAVAPIDAAIQSNLREVTTRVLATLTPREERVLRMRFGIGMNTDHTLEEVGQQFKVTRERIRQIESKALRKLQHPIRSKKLNSFRSGGKRGEGNPSDLLEA

Annotated regions:
phrase: VLATLTPREERVLRMRFGIGMNTDHTLEEVGQQFKVTRERIRQIESKALRKLQ
type: DOMAIN
name: RNA_pol_sigma70_r4
description: RNA polymerase sigma-70 region 4

phrase: MIEANLRLVISIAKKYANRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRAIADQAR
type: DOMAIN
name: RNA_pol_sigma70_r2
description: RNA polymerase sigma-70 region 2

phrase: ETINKILRTSRQMLNELGYEPTATEIANRLSMPLDKVRKVMKIAKEPISLENPVGDDSDGGQLGDFIEDKNAVAPI
type: DOMAIN
name: RNA_pol_sigma70_r3
description: RNA polymerase sigma-70 region 3

phrase: AKKDMIEANLRLVISIAKKYANRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKILRTSRQMLNELGYEPTATEIANRLSMPLDKVRKVMKIAKEPISLENPVGDDSDGGQLGDFIEDKNAVAPIDAAIQSNLREVTTRVLATLTPREERVLRMRFGIGMNTDHTLEEVGQQFKVTRERIRQIESKALRKLQHPIRSKKLNSF
type: DOMAIN
name: RNA_pol_sigma_RpoD_C
description: RNA polymerase sigma factor RpoD, C-terminal

phrase: LDKIDSLLKKAKSKKIPVTYDDINKALPLNKNPSIRQLEEAILKFSDAGVDILESNEDDEIKLDIGMDEEFKLSTNVDNEP
type: DOMAIN
name: RNA_pol_sigma_70_r1_1
description: RNA polymerase sigma factor 70, region 1.1

phrase: AKKDMIEANLRLVISIAKKYANRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKILRTSRQMLNELGYEPTATEIANRLSMPLDKVRKVMKIAKEPISLENPVGDDSDGGQLGDFIEDKNAVAPIDAAIQSNLREVTTRVLATLTPREERVLRMRFGIGMNTDHTLEEVGQQFKVTRERIRQIESKALRKLQH
type: DOMAIN
name: RNA_pol_sigma-70_dom
description: RNA polymerase sigma-70-like domain

phrase: DLIQEGNIGLMKA
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: DLIQEGNIGLMKA
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: FSTYATWW
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: LTPREERVLRMR
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: TLEEVGQQFKVTRER
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: IRQIESKALRK
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: DPVRLYLKDMGGVDLLTRENEVEIAKRIEEGR
type: DOMAIN
name: RNA_pol_sigma70_r1_2
description: RNA polymerase sigma-70 region 1.2

phrase: TLEEVGQQFKVTRERIRQIESKALRK
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: PIAMRCFIVWYEDLVNEKMLLRDLIDLEANMLHDETPENDEEHSSETEGEEHEDNHLSMSRVETQILPNIIERMKKISFICEELLIEAKKCYEKSFEPKVLQNSKKYNNNLELLINEVSEIHFNSKRTEEILGKMYGINRDLINKEIAFLKLAEKYGVTRQNFLDEYIGSVINAAWKEKMLKNKKVAWKELITKESDYIDQMIAELSVI
type: DOMAIN
name: RNA_pol_sigma_70_non-ess
description: RNA polymerase sigma factor 70, non-essential domain
Protein sequence:
MSKQINAIRGMNDLYGDQSHAFDYLVQTAESVLKQYGFQSIRLPIVEKTELFARSIGEVTDIVEKEMYTFEDRNGDSLTLRPEGTAGCVRAVIQNGLAHNQIQKLYYTGPMFRHERPQKGRYRQFNQFGVEVFGIESVDIDAELIALSARLWERLGLQNLELQINSLGSQAARQAYRDILVAYFEEHKSQLDEDSLRRLSTNPLRILDTKNPDMKALVEAAPKLMDHLDEASKQHYEELKAHLDDLGVAYVENPNLVRGLDYYNRTVFEWVTTELGAQGTVCAGGRYDGLVEQIGGKPTPAVGFAMGIERLMALLMDNELVHEENGPDVYMVLAGDSTKRPGLVISEQIRENLPDIKVQMNCGGGSFKSQFKKADKSGARIALVLGEDEVNQKQIAVKYLREEREQEMVPWDQMVTLLKTALTESK

Annotated regions:
phrase: DIKVQMNCGGGSFKSQFKKADKSGARIALVLGEDEVNQKQIAVKYLREEREQEMVPWDQMVTLL
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: YLVQTAESVLKQYGFQSIRLPIVEKTELFARSIGEVTDIVEKEMYTFEDRNGDSLTLRPEGTAGCVRAVIQNGLAHNQIQKLYYTGPMFRHERPQKGRYRQFNQFGVEVFGIESVDIDAELIALSARLWERLGLQNLELQINSLGSQAARQAYRDILVAYFEEHKSQLDEDSLRRLSTNPLRILDTKNPDMKALVEAAPKLMDHLDEASKQHYEELKAHLDDLGVAYVENPNLVRGLDYYNRTVFEWVTTELGAQGTVCAGGRYDGLVEQIGGKPTPAVGFAMGIERLMAL
type: DOMAIN
name: HisRS-like_core
description: Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain

phrase: MSKQINAIRGMNDLYGDQSHAFDYLVQTAESVLKQYGFQSIRLPIVEKTELFARSIGEVTDIVEKEMYTFEDRNGDSLTLRPEGTAGCVRAVIQNGLAHNQIQKLYYTGPMFRHERPQKGRYRQFNQFGVEVFGIESVDIDAELIALSARLWERLGLQNLELQINSLGSQAARQAYRDILVAYFEEHKSQLDEDSLRRLSTNPLRILDTKNPDMKALVEAAPKLMDHLDEASKQHYEELKAHLDDLGVAYVENPNLVRGLDYYNRTVFEWVTTELGAQGTVCAGGRYDGLVEQIGGKPTPAVGFAMGIERLMALLMDNELVHEENGPDVYMVLAGDSTKRPGLVISEQIRENL
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: GPDVYMVLAGDSTKRPGLVISEQIRENLPDIKVQMNCGGGSFKSQFKKADKSGARIALVLGEDEVNQKQIAVKYLREEREQEMVPWDQMVTLL
type: DOMAIN
name: HisRS_anticodon
description: Histidyl-anticodon-binding

phrase: GMNDLYGDQSHAFDYLVQTAESVLKQYGFQSIRLPIVEKTELFARSIGEVTDIVEKEMYTFEDRNGDSLTLRPEGTAGCVRAVIQNGLAHNQIQKLYYTGPMFRHERPQKGRYRQFNQFGVEVFGIESVDIDAELIALSARLWERLGLQNLELQINSLGSQAARQAYRDILVAYFEEHKSQLDEDSLRRLSTNPLRILDTKNPDMKALVEAAPKLMDHLDEASKQHYEELKAHLDDLGVAYVENPNLVRGLDYYNRTVFEWVTTELGAQGTVCAGGRYDGLVEQIGGKPTPAVGFAMGIER
type: DOMAIN
name: HisRS-like_core
description: Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain
Protein sequence:
MQADYVIVGSGSAGSAIAYRLSEDGRYSVIVIEAGGSDFGPFIQMPAALAWPMSMKRYNWGYLSEPEPNLDNRRITAPRGKVIGGSSSINGLVYVRGHAEDFNRWEELGAQGWAYADVLPYFKRMEHSHGGEEGWRGTDGPLHVQRGPVSNPLFHAFIQAGAQAGFELTDDYNGSKQEGFGLMEQTIHNGRRWSAANAYLKPALKRGNVTLVNGFARKVIIENGRAVGVEIERRGRVETVKANREVIVSASSFNSPKLLMLSGIGPAAHLKDMGIEVKADRPGVGANLQDHMEFYFQQVSTKPVSLYSWLPWFWQGVAGAQWLLSKGGLGASNQFEACAFLRSAPGLKQPDIQYHFLPVAISYDGKAAAKSHGFQAHVGYNLSKSRGNVTLRSADPHDDPVIRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDDFRGPEIQPGENIETDEQIDAFLREHLESAYHPCGTCRMGDRNDPMAVVDPECRVIGVEGLRVADSSIFPHVTYGNLNGPSIMTGEKAADHILGKTPLPRSNQEPWVNPRAAVSDR

Annotated regions:
phrase: SSFNSPKLLMLSGI
type: DOMAIN
name: GMC_OxRdtase_N
description: Glucose-methanol-choline oxidoreductase, N-terminal

phrase: KSRGNVTLRSADPHDDPVIRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDDFRGPEIQPGENIETDEQIDAFLREHLESAYHPCGTCRMGDRNDPMAVVDPECRVIGVEGLRVADSSIFPHVTYGNLNGPSIMT
type: DOMAIN
name: GMC_OxRtase_C
description: Glucose-methanol-choline oxidoreductase, C-terminal

phrase: GKVIGGSSSINGLVYVRGHAEDF
type: DOMAIN
name: GMC_OxRdtase_N
description: Glucose-methanol-choline oxidoreductase, N-terminal

phrase: DYVIVGSGSAGSAIAYRLSEDGRYSVIVIEAGGSDFGPFIQMPAALAWPMSMKRYNWGYLSEPEPNLDNRRITAPRGKVIGGSSSINGLVYVRGHAEDFNRWEELGAQGWAYADVLPYFKRMEHSHGGEEGWRGTDGPLHVQRGPVSNPLFHAFIQAGAQAGFELTDDYNGSKQEGFGLMEQTIHNGRRWSAANAYLKPALKRGNVTLVNGFARKVIIENGRAVGVEIERRGRVETVKANREVIVSASSFNSPKLLMLSGIGPAAHLKDMGIEVKADRPGVGANLQDH
type: DOMAIN
name: GMC_OxRdtase_N
description: Glucose-methanol-choline oxidoreductase, N-terminal
Protein sequence:
MVSSVSLFASLTPYLVSALLLFLLLEQLFYRLKKRNLPGPLFVFPIIGNVVALIRDPTSFWDKQSAMADTSVGLSVNYLIGKFIIYIKDAELSNKVFSNIRPDAFQLVGHPFGKKLFGDHSLIFMFGENHKSVRRQVAPNFTRKPLSAYSSLQQIVILRHLRQWEESFSSGSRPVSMRQLIRELNLETSQTVFVGPYLDKEVKNTIRDDYNVFNPGTMALPIDLPGFTFGEARRAVSRLVNTMSLCVRKSKEKMAAGENPTCLVDFWTHSIVAESPPPPHSKDEEISCVLVDFLFASQDASTSSLLWAVVLLESEPEVLRRVREDVARFWSPESKESITADQLAEMKYIRAVAREVLRYRPPASMVPHVAVSDFRLTESYTIPKGTIVFPSLFDASFQGFTEPDRFDPDRFSETRQEDEVFKRNFLTFGIGSHQCVGQRYALNHLVLFIAMFSSMFDFKRVRSDGCDEIVHIPTMSPKDGCTVFLSSRLVTSP

Annotated regions:
phrase: FGIGSHQCV
type: CONSERVED_SITE
name: Cyt_P450_CS
description: Cytochrome P450, conserved site
Protein sequence:
MKNTSSSTTLTMNDTIAAIATPLGKGAISIIKISGHNALNILKQLTQKQDFTPRYAYVCDIFSDGVLLDKALVIYFKAPYSFTGEDVCEIQCHGSPLLAQNILQACLNLGARLAKAGEFSKKAFLNHKMDLSEIEASVQLILCEDESVLNALARQLKGELKIFIEEARNNLLKLLASSEVLIDYSEEDIPSDFLKEVSFNLEKQIASFKDLLDFSNAQKQRNKGHALSIVGKPNAGKSSLLNAMLLEERALVSDIKGTTRDTIEEVIELKGHKVRLIDTAGIRESADEIERLGIEKSLKSLENCDIILGVFDLSKPLEKEDFNLMDTLNRTKKPCIVVLNKNDLAPKLELEILKSYLKIPYSILETNTLNSKACLKDLSQKISEFFPKLDTQNKLLLTSLAQTTALENAITELQNAKSHLDTLELFSYHILSAIENLNLLTRPYETSQMLDSMFSEFCLGK

Annotated regions:
phrase: GHALSIVGKPNAGKSSLLNAMLLEERALVSDIKGTTRDTIEEVIELKGHKVRLIDTAGIRESADEIERLGIEKSLKSLENCDIILGVFDLSKPLEKEDFNLMDTLNRTKKPCIVVLNKNDLAPKLELEILKSYLKIPYSILETNTLNSKACLKDLSQKISEFF
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain

phrase: LSIVGKPNAGKSSLLNAMLL
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: LIDTAGIRESADEIE
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: GHALSIVGKPNAGKSSLLNAMLLEERALVSDIKGTTRDTIEEVIELKGHKVRLIDTAGIRESADEIERLGIEKSLKSLENCDIILGVFDLSKPLEKEDFNLMDTLNRTKKPCIVVLNKNDLAPKLELEILKSYLKIPYSILETNTLNSKACLKDLSQKISEF
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain

phrase: TIAAIATPLGKGAISIIKISGHNALNILKQLTQKQDFTPRYAYVCDIFSDGVLLDKALVIYFKAPYSFTGEDVCEIQCHGSPLLAQNILQACLNLGARLAKAGEFSKKAFLNH
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal

phrase: SIVGKPNAGKSSLLNAMLLEERALVSDIKGTTRDTIEEVIELKGHKVRLIDTAGIRESADEIERLGIEKSLKSLENCDIILGVFDLSKPLEKEDFNLMDTLNRTKKPCIVVLN
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: ALSIVGKPNAGKSSLLNAMLLEERALVSDIKGTTRDTIEEVIELKGHKVRLIDTAGIRESADEIERLGIEKSLKSLENCDIILGVFDLSKPLEKEDFNLMDTLNRTKKPCIVVLNKNDLA
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: LSEIEASVQLILCEDESVLNALARQLKGELKIFIEEARNNLLKLLASSEVLIDYSEEDIPSDFLKEVSFNLEKQIASFKDLLDFSNAQKQRNKGHALSIVGKPNAGKSSLLNAMLLEERALVSDIKGTTRDTIEEVIELKGHKVRLIDTAGIRESADEIERLGIEKSLKSLENCDIILGVFDLSKPLEKEDFNLMDTLNRTKKPCIVVLNKNDLAPKLELEILKSYLKIPYSILETNTLNSKACLKDLSQKISEFFPKLDTQNKLLLTSLAQTTALENAITELQNAKSHLDTLELFSYHILSAIENLNLLTRPYETSQMLDSMFSEF
type: DOMAIN
name: MnmE_helical
description: MnmE, helical domain

phrase: DTIAAIATPLGKGAISIIKISGHNALNILKQLTQKQDFTPRYAYVCDIFSDGVLLDKALVIYFKAPYSFTGEDVCEIQCHGSPLLAQNILQACLNLGARLAKAGEFSKKAFL
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal
Protein sequence:
MPIFFYLFTTLIIISSLCVVLSKNSVYSVLWLIFTFINAAGLMILLGAEFLAMLLIVIYVGAVAVLFLFVIMMLDINFNQAITKLRENLSLSIFITLIMFVDLVITVILSTKNINHSSNISFAIANNISNTKAIGSVLYTDFMLPFQMAGLILFVAMISCITLTLKKRERVKYQDIRKQLSHNKGNVILMTKPILNKGVENIKYE

Annotated regions:
Protein sequence:
MAYPFQLGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLEMVPLSYFETWSALMV

Annotated regions:
phrase: PSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLEMVPLSYFET
type: DOMAIN
name: CcO_II_C
description: Cytochrome c oxidase subunit 2, C-terminal

phrase: NPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLEMVPLSYFETWSA
type: DOMAIN
name: CcO_II-like_C
description: Cytochrome c oxidase subunit II-like C-terminal

phrase: YPFQLGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLR
type: DOMAIN
name: Cyt_c_oxidase_su2_TM_dom
description: Cytochrome C oxidase subunit II, transmembrane domain

phrase: LTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLEM
type: DOMAIN
name: CcO_II-like_C
description: Cytochrome c oxidase subunit II-like C-terminal

phrase: VLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSF
type: BINDING_SITE
name: Copper_CuA
description: Copper centre Cu(A)

phrase: SPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEINNPSLTVKTMGHQWYWSYEYTDYEDLNFDSYMIPTQELKPGELRLLEVDNRVVLPMEMTVRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQTTLMAMRPGLYYGQCSEICGSNHSFMPIVLEMVPLSYFETW
type: DOMAIN
name: Cyt_c_oxidase_su2
description: Cytochrome c oxidase, subunit II

phrase: MAYPFQLGLQDATSPIMEELLHFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETVWTILPAIILILIALPSLRILYMMDEI
type: DOMAIN
name: Cyt_c_oxidase_su2_TM_dom
description: Cytochrome C oxidase subunit II, transmembrane domain
Protein sequence:
MPRRYLLDFEKPLVELEKQIEQIRELARDSEVDVSQQLLQLETLATRRREEIFRSLTPAQKIQVARHPQRPSTLDFIQMFCDDWIELHGDRNGGDDMALIGGLGSVNNQPVLLLGHQKGRDTKENVVRNFGMAKPGGYRKALRLMQHADRFSLPILTFIDTPGAYAGLSAEEQGQGEAIARNLREMFGFKVPIIATIIGEGGSGGALGIGVADRLLMFEHSVYTVASPEACASILWRDAAKASEAATALKITGKDLLELGVIDEVLSEPAGGNNWAPIEAGNTLKGAIEKHLNELLELKKEELLEQRYSKFRVLGKFVESNNFEEIQEQLPQITE

Annotated regions:
phrase: QLETLATRRREEIFRSLTPAQKIQVARHPQRPSTLDFIQMFCDDWIELHGDRNGGDDMALIGGLGSVNNQPVLLLGHQKGRDTKENVVRNFGMAKPGGYRKALRLMQHADRFSLPILTFIDTPGAYAGLSAEEQGQGEAIARNLREMFGFKVPIIATIIGEGGSGGALGIGVADRLLMFEHSVYTVASPEACASILWRDAAKASEAATALKITGKDLLELGVIDEVLSEPAGGNNWAPIEAGNTLKGAIEKHLN
type: DOMAIN
name: COA_CT_C
description: Acetyl-coenzyme A carboxyltransferase, C-terminal