nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MDLRQFRYFVAVARERNFTRAARQLNIAQPPLSRQIQLLEEEVGVPLLIRNSRPVQLTDAGRLFFEQAIQVLGRVEQMQAATRRVGLHQRSVLSIGFVASTLYGVLPTLMRKLRQHAPELDIQMVELMSVQQIQAINEGRIDIGFGRVHHSDPNVSSIVLHEERLAVALPMESPMARESTPLPVHQLAGEKLIVYPKEPRPGFADQVLNILDRHDVQPGQVMEVREIQTALGLVAAEFGVCVIPASARQMRHDVHYRLIDGDRATSPVIVSHRANDSSKYISLTKQLIREMYAEHPAWLDTHN

Annotated regions:
phrase: MDLRQFRYFVAVARERNFTRAARQLNIAQPPLSRQIQLLEEEVGVPLLIRNSRPVQL
type: DOMAIN
name: Tscrpt_reg_HTH_LysR
description: Transcription regulator HTH, LysR

phrase: RSVLSIGFVASTLYGVLPTLMRKLRQHAPELDIQMVELMSVQQIQAINEGRIDIGFGRVHHSDPNVSSIVLHEERLAVALPMESPMARESTPLPVHQLAGEKLIVYPKEPRPGFADQVLNILDRHDVQPGQVMEVREIQTALGLVAAEFGVCVIPASARQMRHDVHYRLIDGDRATSPVIVSHRANDSSKYISLTKQLIR
type: DOMAIN
name: LysR_subst-bd
description: LysR, substrate-binding

phrase: FTRAARQLNIA
type: DOMAIN
name: Tscrpt_reg_HTH_LysR
description: Transcription regulator HTH, LysR

phrase: QPPLSRQIQL
type: DOMAIN
name: Tscrpt_reg_HTH_LysR
description: Transcription regulator HTH, LysR

phrase: LEEEVGVPLLI
type: DOMAIN
name: Tscrpt_reg_HTH_LysR
description: Transcription regulator HTH, LysR

phrase: LRQFRYFVAVARERNFTRAARQLNIAQPPLSRQIQLLEEEVGVPLLIRNSRPVQLTDAG
type: DOMAIN
name: Tscrpt_reg_HTH_LysR
description: Transcription regulator HTH, LysR
Protein sequence:
MSRQFTCKSGAAAKGGFSGCSAVLSGGSSSSFRAGSKGLSGGFGSRSLYSLGGVRSLNVASGSGKSGGYGFGRGRASGFAGSMFGSVALGPVCPTVCPPGGIHQVTVNESLLAPLNVELDPEIQKVRAQEREQIKALNNKFASFIDKVRFLEQQNQVLETKWELLQQLDLNNCKNNLEPILEGYISNLRKQLETLSGDRVRLDSELRNVRDVVEDYKKRYEEEINKRTAAENEFVLLKKDVDAAYANKVELQAKVESMDQEIKFFRCLFEAEITQIQSHISDMSVILSMDNNRNLDLDSIIDEVRTQYEEIALKSKAEAEALYQTKFQELQLAAGRHGDDLKNTKNEISELTRLIQRIRSEIENVKKQASNLETAIADAEQRGDNALKDARAKLDELEGALHQAKEELARMLREYQELMSLKLALDMEIATYRKLLESEECRMSGEFPSPVSISIISSTSGGSVYGFRPSMVSGGYVANSSNCISGVCSVRGGEGRSRGSANDYKDTLGKGSSLSAPSKKTSR

Annotated regions:
phrase: QEREQIKALNNKFASFIDKVRFLEQQNQVLETKWELLQQLDLNNCKNNLEPILEGYISNLRKQLETLSGDRVRLDSELRNVRDVVEDYKKRYEEEINKRTAAENEFVLLKKDVDAAYANKVELQAKVESMDQEIKFFRCLFEAEITQIQSHISDMSVILSMDNNRNLDLDSIIDEVRTQYEEIALKSKAEAEALYQTKFQELQLAAGRHGDDLKNTKNEISELTRLIQRIRSEIENVKKQASNLETAIADAEQRGDNALKDARAKLDELEGALHQAKEELARMLREYQELMSLKLALDMEIATYRKLLESEEC
type: DOMAIN
name: IF_rod_dom
description: Intermediate filament, rod domain

phrase: EREQIKALNNKFASFIDKVRFLEQQNQVLETKWELLQQLDLNNCKNNLEPILEGYISNLRKQLETLSGDRVRLDSELRNVRDVVEDYKKRYEEEINKRTAAENEFVLLKKDVDAAYANKVELQAKVESMDQEIKFFRCLFEAEITQIQSHISDMSVILSMDNNRNLDLDSIIDEVRTQYEEIALKSKAEAEALYQTKFQELQLAAGRHGDDLKNTKNEISELTRLIQRIRSEIENVKKQASNLETAIADAEQRGDNALKDARAKLDELEGALHQAKEELARMLREYQELMSLKLALDMEIATYRKLLESEECR
type: DOMAIN
name: IF_rod_dom
description: Intermediate filament, rod domain

phrase: IATYRKLL
type: CONSERVED_SITE
name: IF_conserved
description: Intermediate filament protein, conserved site

phrase: QEREQIKALNNKFASFIDKVRFLEQQNQVLETKWELLQQLDLNNCKNNLEPILEGYISNLRKQLETLSGDRVRLDSELRNVRDVVEDYKKRYEEEINKRTAAENEFVLLKKDVDAAYANKVELQAKVESMDQEIKFFRCLFEAEITQIQSHISDMSVILSMDNNRNLDLDSIIDEVRTQYEEIALKSKAEAEALYQTKFQELQLAAGRHGDDLKNTKNEISELTRLIQRIRSEIENVKKQASNLETAIADAEQRGDNALKDARAKLDELEGALHQAKEELARMLREYQELMSLKLALDMEIATYRKLLESEEC
type: DOMAIN
name: IF_rod_dom
description: Intermediate filament, rod domain

phrase: GSGKSGGYGFGRGRASGFAGSMFGSVALGPVCPTVCPPGGIHQVTVNESLLAPLNVELDPEIQK
type: DOMAIN
name: Keratin_2_head
description: Keratin type II head
Protein sequence:
MRINPTTYGSEISLIEKKNRGRIVQIIGPVLDVAFPPGKMPNIYNALVVKGRDTEQMNVTCEVQQLLGNNRVRAVAMNDTDGLMRGMEVIDMGTPITVPVGGSTLGRIFNVLGEPVDNFGPVDTNTTSTIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNITESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSMMLQPRIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFNLILSGELDSLPEQAFYLVGNIDEATKKAMDLKT

Annotated regions:
phrase: PAVDPLDST
type: ACTIVE_SITE
name: ATPase_a/bsu_AS
description: ATPase, alpha/beta subunit, nucleotide-binding domain, active site

phrase: RGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNITESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: RIVGEEHYETAQKVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGFNLILSGE
type: DOMAIN
name: ATP-synt_VA_C
description: ATP synthase A/B type, C-terminal domain

phrase: IVQIIGPVLDVAFPPGKMPNIYNALVVKGRDTEQMNVTCEVQQLLGNNRVRAVAMNDTDGLMRGMEVIDM
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_N
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain

phrase: GIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNITESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDST
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_nucl-bd
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain
Protein sequence:
MLSQRLIGRAAVRSAFKPSGLPVVVSPRLRRTYATESEEKDLVIIGGGVAGYVAAIKAGQEGLKVACIEKRGTLGGTCLNVGCIPSKSLLNNSHLYHQILHDSKHRGIEVGDVKLNLAQLMKAKEQSVSGLTKGVEFLLKKNGVEYIKGAGAFADEHTINVKLNDGGETSVKGKNILIATGSEVTPFPGLEIDEKRVISSTGAIALEKVPEKMLVIGGGIIGLEMASVWSRLGAQVTVIEFLDQIGGPGMDLEVAKSIQKILKKQGINFKTGTKVVSGDKTGETVKLEVDSAKGGKPETLEGDVVLVAIGRRPYTEGLGLENIGLEKDERGRVIIDSEYRTKIPHIRCVGDVTFGPMLAHKAEEEAVAVVEYIKKGYGHVNYGCIPSVMYTFPEVAWVGQSEQELKKAGVPYRVGTFPFSANSRAKTNLDTEGMVKMIADPETDRILGVHIIGPNAGEMIAEGTLALEYGASSEDIARTCHAHPTLAEAFKEAAMATHSKAIHF

Annotated regions:
phrase: KDLVIIGGGVAGYVAAIKAGQEGLKVACIEKRGTLGGTCLNVGCIPSKSLLNNSHLYHQILHDSKHRGIEVGDVKLNLAQLMKAKEQSVSGLTKGVEFLLKKNGVEYIKGAGAFADEHTINVKLNDGGETSVKGKNILIATGSEVTPFPGLEIDEKRVISSTGAIALEKVPEKMLVIGGGIIGLEMASVWSRLGAQVTVIEFLDQIGGPGMDLEVAKSIQKILKKQGINFKTGTKVVSGDKTGETVKLEVDSAKGGKPETLEGDVVLVAIGRRPYTEGLGLENIGLEKDERGRVIIDSEYRTKIPHIRCVGDVTFGPMLAHKAEEE
type: DOMAIN
name: FAD/NAD-binding_dom
description: FAD/NAD(P)-binding domain

phrase: GGTCLNVGCI
type: ACTIVE_SITE
name: Pyr_OxRdtase_I_AS
description: Pyridine nucleotide-disulphide oxidoreductase, class I, active site

phrase: IPSVMYTFPEVAWVGQSEQELKKAGVPYRVGTFPFSANSRAKTNLDTEGMVKMIADPETDRILGVHIIGPNAGEMIAEGTLALEYGASSEDIARTCHAHPTLAEAFKEA
type: DOMAIN
name: Pyr_nucl-diS_OxRdtase_dimer
description: Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
Protein sequence:
MSLPDPAELIRQMATDLNAHLSKRGISDPRFIGIRTGGVWVAQALLKALNNPAPLGTLDVSFYRDDFSQNGLHPQVRPSELPFEIEGQHLVLIDDVLMSGRTVRAALNELFDYGRPASVTLVCLLDLDAGELPVRPNVVGATLSLAPDERIKLSGPEPLALELQDLSTAL

Annotated regions:
phrase: LIRQMATDLNAHLSKRGISDPRFIGIRTGGVWVAQALLKALNNPAPLGTLDVSFYRDDFSQNGLHPQVRPSELPFEIEGQHLVLIDDVLMSGRTVRAALNELFDYGRPASVTLVCLLDLDAGELPVRPN
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: LIRQMATDLNAHLSKRGISDPRFIGIRTGGVWVAQALLKALNNPAPLGTLDVSFYRDDFSQNGLHPQVRPSELPFEIEGQHLVLIDDVLMSGRTVRAALNELFDYGRPASVTLVCLLDLDAGELPVRPNVVGA
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain
Protein sequence:
MKTTNKIIILDFGSQYTQLIARRIRDLEVYCEVWPYNTALEKIKTTSMKGIILSGGPASVYEEDAFLIDKQLFELKVPVLGICYGMQIISHLHEGTVQRATKQEFGFSELIIDNQEDLFANIPVKSQVWMSHADYIEGMPTNFIQIAHSENSISAIKHSEKKIYGLQFHPEVTHTLIGQQLLSNFVFNICGCQPKWKITEFISAAITEIKNKVGTDNVVLALSGGVDSSVCAVLLHKAIGKQLTCIFVDTGLLRQNSGWNDLQKFQEKFKLNIIKINAQERFLTALKGVTNPEEKRKIIGNLFIEIFNEEAIKIQNVKWLGQGTIYPDVIESVSVKGPSATIKSHHNVGGLPKDLPFQLIEPLRELFKDEVRRTGEALGIDFKFVYKHPFPGPGLAVRIIGEITAEKIALLQAADQIFIDELYQANLYDQVAQAFVVLLPVQSVGVMGDVRTYGYTAVVRSVDTTDFMTANWSRLPFELLEKVSARIVSEVHGINRITYDITSKPPGTIEWE

Annotated regions:
phrase: WKITEFISAAITEIKNKVGTDNVVLALSGGVDSSVCAVLLHKAIGKQLTCIFVDTGLLRQNSGWNDLQKFQEKFKLNIIKINAQERFLTALKGVTNPEEKRKIIGNLFIEIFNEEAIKIQNVKWLGQGTIYPDVIESVSVKGPSATIKSHHNVGGLPKDLPFQLIEPLRELFKDEVRRTGEALGIDFKFVY
type: DOMAIN
name: GMPS_ATP_PPase_dom
description: GMP synthetase ATP pyrophosphatase domain

phrase: ILDFGSQYTQLIARRIRDLEVYCEVWPYNTALEKIKTTSMKGIILSGGPASVYEEDAFLIDKQLFELKVPVLGICYGMQIISHLHEGTVQRATKQEFGFSELIIDNQEDLFANIPVKSQVWMSHADYIEGMPTNFIQIAHSENSISAIKHSEKKIYGLQFHPEVTHTLIGQQLLSNFVF
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: IIILDFGSQYTQLIARRIRDLEVYCEVWPYNTALEKIKTTSMKGIILSGGPASVYEEDAFLIDKQLFELKVPVLGICYGMQIISHLHEGTVQRATKQEFGFSELIIDNQEDLFANIPVKSQVWMSHADYIEGMPTNFIQIAHSENSISAIKHSEKKIYGLQFHPEVTHTLIGQQLLSNFVFNICG
type: DOMAIN
name: GMP_synth_GATase
description: GMP synthase, glutamine amidotransferase

phrase: SAAITEIKNKVGTDNVVLALSGGVDSSVCAVLLHKAIGKQLTCIFVDTGLLRQNSGWNDLQKFQEKFKLNIIKINAQERFLTA
type: DOMAIN
name: NAD/GMP_synthase
description: NAD/GMP synthase

phrase: DELYQANLYDQVAQAFVVLLPVQSVGVMGDVRTYGYTAVVRSVDTTDFMTANWSRLPFELLEKVSARIVSEVHGINRITYDITSKPPGTIE
type: DOMAIN
name: GMP_synth_C
description: GMP synthase, C-terminal

phrase: IIILDFGSQYTQLIARRIRDLEVYCEVWPYNTALEKIKTTSMKGIILSGGPASVYEEDAFLIDKQLFELKVPVLGICYGMQIISHLHEGTVQRATKQEFGFSELIIDNQEDLFANIPVKSQVWMSHADYIEGMPTNFIQIAHSENSISAIKHSEKKIYGLQFHPEVTHTLIGQQLLSNF
type: DOMAIN
name: GMP_synth_GATase
description: GMP synthase, glutamine amidotransferase

phrase: IKNKVGTDNVVLALSGGVDSSVCAVLLHKAIGKQLTCIFVDTGLLRQNSGWNDLQKFQEKFKLNIIKINAQERFLTALKGVTNPEEKRKIIGNLFIEIFNEEAIKIQNVKWLGQGTIYPDVIESVSVKGPSATIKSHHNVGGLPKDLPFQLIEPLRELFKDEVRRTGEALGIDFKFVYKHPFPGPGLAVRIIGEITAEKIALLQAADQIFIDELYQANLYDQVAQAFVVLLPVQSVGVMGDVRTYGYTAVVRSVDTTDFMTANWSRLPFELLEKVSARIVSEVHGINRITYDITSKPPGTIEW
type: DOMAIN
name: GMP_synth_C
description: GMP synthase, C-terminal

phrase: EFISAAITEIKNKVGTDNVVLALSGGVDSSVCAVLLHKAIGKQLTCIFVDTGLLRQNSGWNDLQKFQEKFKLNIIKINAQERFLTALKGVTNPEEKRKIIGNLFIEIFNEEAIKIQNVKWLGQGTIYPDVIESVSVKGPSATIKSHHNVGGLPKDLPFQLIEPLRELFKDEVRRTGEALGIDFKFVYKHPFPGPGLAVRIIGEITAEKIALLQAADQIFIDELYQANLYDQVAQAFVVLLPVQSVGVMGDVRTYGYTAVVRSVDTTDFMTANWSRLPFELLEKVSARIVSEVHGINRITYDITSKPPGTIEW
type: DOMAIN
name: GMP_synth_C
description: GMP synthase, C-terminal
Protein sequence:
GRPNLYSFTLISNGQSMSFGPDSGPVWAARRRLAQNGLKSFSIASDPASSSSCYLEEHVSKEAEVLISKLQEQMAGPGHFNPYRYVVVSVANVICAICFGQRYDHNHQELLSLVNLSNNFGEVVGSGNPADFIPILRYLPNRSLNGFKDLNEKFHS

Annotated regions:
Protein sequence:
MSQASSSPGEGPSSEAAAISEAEAASGSFGRLHCQVLRLITNVEGGSLEAGRLRLLDLRTNIEVSRPSVLCCFQENKSPHDTVDLTDLNIKGRCVVGEQDRLLVDLNNFGPRRLTPGSENNTVSVLAFALPLDRVPVSGLHLFQSQRRGGEENRPRMEARAIIRRTAHHWAVRLTVTPNWRRRTDSSLEAGQIFVSQFAFRAGAIPLTLVDALEQLACSDPNTYIHKTETDERGQWIMLFLHHDSPHPPTSVFLHFSVYTHRAEVVARHNPYPHLRRLPDNGFQLLIPKSFTLTRIHPEYIVQIQNAFETNQTHDTIFFPENIPGVSIEAGPLPDRVRITLRVTLTGDQAVHLEHRQPLGRIHFFRRGFWTLTPGKPDKIKRPQVQLRAGLFPRSNVMRGAVSEFLPQSPGLPPTEEEEEEEEEDDEDDLSSTPTPTPLSEAMFAGFEEASGDEDSDTQAGLSPALILTGQRRRSGNNGALTLVIPSWHVFASLDDLVPLTVSVQHAALRPTSYLRSDMDGDVRTAADISSTLRSVPAPRPSPISTASTSSTPRSRPRI

Annotated regions:
Protein sequence:
MGFQNEASSSSYTLKIPPPAREDSPLLGKGPPLSSQFKTFANVFIAVVGAGVLGLPYAFKRTGWLMGVLLLVSVSVLTHHCMMLLVYTRRKLDSFNAGISKIGSFGDLGFAVCGSLGRIVVDLFIILSQAGFCVGYLIFIGTTLANLSDPESPTSLRHQFTRLGSEFLGVSSKSLYIWGCFPFQLGLNSIKTLTHLAPLSIFADIVDLGAMAVVIVEDSMIILKQRPDVVAFGGMSLFLYGMGVAVYSFEGVGMVLPLESEMKDKDKFGKVLALGMGFISLIYIAFGILGYLAFGEDTMDIITANLGAGLVSTVVQLGLCINLFFTFPLMMNPVFEIVERRFSRGMYSAWLRWVLVLAVTLVALFVPNFADFLSLVGSSTCCVLGFVLPALFHLLVFKEEMGWLQWSSDTAIVVLGVVLAVSGTWSSLSEIFSVKV

Annotated regions:
phrase: SQFKTFANVFIAVVGAGVLGLPYAFKRTGWLMGVLLLVSVSVLTHHCMMLLVYTRRKLDSFNAGISKIGSFGDLGFAVCGSLGRIVVDLFIILSQAGFCVGYLIFIGTTLANLSDPESPTSLRHQFTRLGSEFLGVSSKSLYIWGCFPFQLGLNSIKTLTHLAPLSIFADIVDLGAMAVVIVEDSMIILKQRPDVVAFGGMSLFLYGMGVAVYSFEGVGMVLPLESEMKDKDKFGKVLALGMGFISLIYIAFGILGYLAFGEDTMDIITANLGAGLVSTVVQLGLCINLFFTFPLMMNPVFEIVERRFSRGMYSAWLRWVLVLAVTLVALFVPNFADFLSLVGSSTCCVLGFVLPALFHLLVFKEEMGWLQWSSDTAIVVLGVVLAVSGTWS
type: DOMAIN
name: AA_transpt_TM
description: Amino acid transporter, transmembrane domain
Protein sequence:
MKRITILGSSGSIGKQTLNIISKMKENVCIEGLAVGSNIKILKSQIKKFKPASVSVNSPAEAQNLKKWCISNNIKTDVYKGNTGLEKLTTMPKTDMILAAIIGAVGLKSIIAAIKAKKDIAIANKEAIVMAGSYIMKLAAENGVSVLPVDSEHSAIFQCCTDEKKSQIKRIILTASGGPFYKYDKDFSKITVEQALDHPTWKMGRKITVDSATLMNKGLEAIEASVLFGVSIDKVEIIIHPQSVVHSMVEYVDGSVIAQLSNPDMKLPIQYALTYPERLPSNIKPLNLIEINKLEFYNPDFNKFPCLSLAYYAAQKGYTVPAVMNAANEMAVASFLNKEIKFTDIAKIVGRTIKTHKISKSTSLDTFIEADYWARHYAEKLINEI

Annotated regions:
phrase: ITILGSSGSIGKQTLNIISKMKENVCIEGLAVGSNIKILKSQIKKFKPASVSVNSPAEAQNLKKWCISNNIKTDVYKGNTGLEKLTTMPKTDMILAAIIGAVGLKSIIAAIKAKKDIAIANKEAIVMA
type: DOMAIN
name: DXP_reductoisomerase_N
description: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal

phrase: VLPVDSEHSAIFQCCTDEKKSQIKRIILTASGGPFYKYDKDFSKITVEQALDHPTWKMGRKITVDSATLMNKGLEAIEASVL
type: DOMAIN
name: DXP_reductoisomerase_C
description: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal

phrase: LSNPDMKLPIQYALTYPERLPSNIKPLNLIEINKLEFYNPDFNKFPCLSLAYYAAQKGYTVPAVMNAANEMAVASFLNKEIKFTDIAKIVGRTIKTHKISKSTSLDTFIEADYWARH
type: DOMAIN
name: DXPR_C
description: DXP reductoisomerase, C-terminal domain
Protein sequence:
MIIHTLELSSYRNYSKTAVVFGEKINVFVGENAQGKTNLLEAIYVVALAKSHRTQKDKEMIGFEEPFARIHAKAEKRTGEVELDIILSAKGKKGKINGLEQRRLSDYVGTLNVVMFAPEDLDLVKGSPQVRRRFIDMELGQISPVYLNSLSLYGKILKQRNVLLKNMQQKRSQNYAMVDVLTEQLIDKAAFVMKKRAEFISRLEEWATPIHQSISRGKEMLTLSYIPSIEVSDIENMSKIKEDLYKAYETKRETEVRRGTTLFGPHRDDVSFSVNGLDVQSYGSQGQQRTTALSVKLAEIDLIYAEIGDYPILLLDDVLSELDNYRQSHLLEAIQARVQTFVTTTSTSGLDDSVLAEACLFSVDQGTVKRLE

Annotated regions:
phrase: ILLLDDVLSELDNYRQSH
type: CONSERVED_SITE
name: DNA-binding_RecF_CS
description: DNA-binding, RecF, conserved site

phrase: IHTLELSSYRNYSKTAVVFGEKINVFVGENAQGKTNLLEAIYVVALAKSHRTQKDKEMIGFEEPFARIHAKAEKRTGEVELDIILSAKGKKGKINGLEQRRLSDYVGTLNVVMFAPEDLDLVKGSPQVRRRFIDMELGQISPVYLNSLSLYGKILKQRNVLLKNMQQKRSQNYAMVDVLTEQLIDKAAFVMKKRAEFISRLEEWATPIHQSISRGKEMLTLSYIPSIEVSDIENMSKIKEDLYKAYETKRETEVRRGTTLFGPHRDDVSFSVNGLDVQSYGSQGQQRTTALSVKLAEIDLIYAEIGDYPILLLDDVLSELDNYRQSHLLEAIQARVQTFVTTTSTS
type: DOMAIN
name: RecF/RecN/SMC_N
description: RecF/RecN/SMC, N-terminal

phrase: FAPEDLDLVKGSPQVRRRFI
type: CONSERVED_SITE
name: DNA-binding_RecF_CS
description: DNA-binding, RecF, conserved site
Protein sequence:
MGAATSALNRRQLDEFEHIRLRPNGKKKYQIKHLIWAGKKMDRFGLHEKLLETEEGCKKIIEVLSPLEPTGSEGMKSLYNLVCVLLCVHQEKKVKDTEEALAIVRQCCHLVDKEKTAVTPPGGQQKNNTGGTATPGGSQNFPAQQQGNAWVHVPLSPRTLNAWVKAVEEKKFGAEIVPMFQALSEGCTPYDINQMLNVLGDHQGALQIVKEIINEEAAQWDVTHPPPAGPLPAGQLRDPGGSDIAGTTSTVQEQLEWIYTANPRVDVGAIYRRWIILGLQKCVKMYNPVSVLDIRQGPKEPFKDYVDRFYKAIRAEQASGEVKQWMTESLLIQNANPDCKVILKGLGMHPTLEEMLTACQGVGGPSYKAKVMAEMMQNLQSQNMVQQGGGRGRPRPPPKCYNCGKFGHMQRQCPEPRKIKCLKCGKPGHLAKDCRGQVNFLGYGRWMGTKPRNFPAATLGAEPSAPPPPNNSTPYDPAKKLLQQYAEKGKQMRNQNRNPPANNPDWNEGYSLNSLFGEDQ

Annotated regions:
phrase: SVLDIRQGPKEPFKDYVDRFYKAIRAEQASGEVKQWMTESLLIQNANPDCKVILKGLGMHPTLEEMLTACQGVGGPSYKAKVMAEMMQNLQSQNMVQQGGGRGRPRPPPKCYNCGKFGHMQRQCPEPRKIKCLKCGKPGHLAKDCRGQ
type: DOMAIN
name: Primate_lentivir_Gag_pol-like
description: Primate lentivirus group Gag polyprotein-like

phrase: KCLKCGKPGHLAKDCR
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: KCYNCGKFGHMQRQCP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: GAATSALNRRQLDEFEHIRLRPNGKKKYQIKHLIWAGKKMDRFGLHEKLLETEEGCKKIIEVLSPLEPTGSEGMKSLYNLVCVLLCVHQEKKVKDTEEALAIVRQCCHLVDKEKTAVTPPGGQQKNNTGGTATPGGSQN
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: ATSALNRRQLDEFEHI
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: RPNGKKKYQIKHLIWAGK
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: DRFGLHEKLLETEEG
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: TGSEGMKSLYNLVCVLLCV
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: HQEKKVKDTEEAL
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: KCLKCGKPGHLAKDC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: KCYNCGKFGHMQRQCP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: KCYNCGKFGHMQRQCP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: KCLKCGKPGHLAKDC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: MYNPVSVLDIRQGPKEPFKDYVDRFYKAIRAEQASGEVKQWMTESLLIQNANPDCKVILKGLGMHPTLEEMLT
type: DOMAIN
name: Gag_p24_C
description: Retroviral nucleocapsid Gag protein p24, C-terminal domain
Protein sequence:
MNKVALYCRPGFEKECAAEITDKAGQIGVYGFSRVKEGSGYVIFECYQEGDADKIARDVDFRGLIFARQLFVCGELLKNLPPEDRITPIIDQLKGSTEKAGELRVEVADTNESKELLKFCRKFTVPLRNQLRKEKILLKVENYSRPVIHVFFIAPGCCYVGYSYSFNNSPFYMGIPRLKFPADAPSRSTLKLEEAFHVFIPYEEWEERLASGMSAVDLGACPGGWTYQLVKRSMMVHAVDNGPMAPSLMETGQVRHHQADGFKFEPTSKNITWLVCDMVEKPAKVAALMTTWIVNEWCREAIFNLKLPMKKRYEEVAHILDKIRAELAEKGINAKIQAKHLYHDREEITVHIQNIWAAYRPDREF

Annotated regions:
phrase: DRITPIIDQLKGSTEKAGELRVEVADTNESKELLKFCRKFTVPLRNQLRKEKILLKVENYSRPVIHVFFIAPGCCYVGYS
type: DOMAIN
name: RlmM_THUMP-like
description: Ribosomal RNA large subunit methyltransferase M, THUMP-like domain

phrase: MNKVALYCRPGFEKECAAEITDKAGQIGVYGFSRVKEGSGYVIFECYQEGDADKIARDVDFRGLIFARQL
type: DOMAIN
name: RlmM_FDX
description: RlmM ferredoxin-like domain

phrase: SRSTLKLEEAFHVFIPYEEWEERLASGMSAVDLGACPGGWTYQLVKRSMMVHAVDNGPMAPSLMETGQVRHHQADGFKFEPTSKNITWLVCDMV
type: DOMAIN
name: RNA_MeTrfase_FtsJ_dom
description: Ribosomal RNA methyltransferase, FtsJ domain
Protein sequence:
MTEKKPTPMMEQWHQCKEKAGDSVLLFRMGDFYEAFYDDAVLLSQHLELTLTQRQGIPMSGIPVSTVDTYVDRLIGKGFKVAVAEQFGEPAKEKESKKIGPMARDIQRFVTPGTLLSSTLLQEKFNNYIVAINRIGSLFGFACLDLSTGSFFIEECENTKELVDEICRLAPSEVLSCNKFYNKETAIVMQLQQHLKLTLSTYADWAFEHKFASQKLTTHFQVASLDGFGLKGLVPAINAAGGLLSYIQDKLLLPTKHIAIPQTRGKQQKLLIDTASQVNLELLAPLNDPQGKNSLLRIMDHTSTPMGGRLLRQILISPFYNPKEILVRQDAVEFFLRQVTLRKNIKTYLCQVRDIERLMTKVTTGLAGPRDIGTLRDSFSAGAQIYEQLASATLPEFFIDKCSLDTKLASLIALLSKSLNGDLPLRVSDGNIFVDEFHNDLKRLRHNQEHSQEWIWEYQERIRKETGIKKLKICFAQALGYYIEVSSEFAPQLPKDFIRRQSRLHAERFTTIELQQFQDDMSNISEKLQTLETQFFKDLCSHILQLRTEILALSQSLADLDYIISLADLAHAQGYCRPRVDMSDTLCIYRGCHPVAKTLVDTGKFIPNDTEMRGSQTRMILLTGPNMAGKSTYIRQIALLVIMAQMGSYIPAKSAHIGVIDKIFTRIGAGDNLSKGMSTFMVEMAETANILHNATDRSLVILDEVGRGTSTYDGLAIAQAVVEYLLFTDKKKAKTLFATHYKELTTLEDHCPHVENFHAGVKDKAGQPVFLYEILKGHSQKSFGIHVARLAGFPLCVVSRAQQILRQLEGPESITRPAQDKMQQLTLF

Annotated regions:
phrase: NYIVAINRIGSLFGFACLDLSTGSFFIEECENTKELVDEICRLAPSEVLSCNKFYNKETAIVMQLQQHLKLTLSTYADWAFEHKFASQKLTTHFQVASLDGFGLKGLVPAINAAGGLLSYIQDKLLLPTKH
type: DOMAIN
name: DNA_mmatch_repair_MutS_con_dom
description: DNA mismatch repair protein MutS, connector domain

phrase: SLVILDEVGRGTSTYD
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: TPMMEQWHQCKEKAGDSVLLFRMGDFYEAFYDDAVLLSQHLELTLTQRQGIPMSGIPVSTVDTYVDRLIGKGFKVAVAEQFGEPAKEKESKKIGPMARDIQRFVTPGTLLS
type: DOMAIN
name: DNA_mismatch_repair_MutS-lik_N
description: DNA mismatch repair protein MutS-like, N-terminal

phrase: ILLTGPNMAGKSTYIRQIALLVIMAQMGSYIPAKSAHIGVIDKIFTRIGAGDNLSKGMSTFMVEMAETANILHNATDRSLVILDEVGRGTSTYDGLAIAQAVVEYLLFTDKKKAKTLFATHYKELTTLEDHCPHVENFHAGVKDKAGQPVFLYEILKGHSQKSFGIHVARLAGFPLCVVSRAQQILRQL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: EFHNDLKRLRHNQEHSQEWIWEYQERIRKETGIKKLKICFAQALGYYIEVSSEFAPQLPKDFIRRQSRLHAERFTTIELQQFQDDMSNIS
type: DOMAIN
name: DNA_mismatch_repair_MutS_clamp
description: DNA mismatch repair protein MutS, clamp

phrase: QVNLELLAPLNDPQGKNSLLRIMDHTSTPMGGRLLRQILISPFYNPKEILVRQDAVEFFLRQVTLRKNIKTYLCQVRDIERLMTKVTTGLAGPRDIGTLRDSFSAGAQIYEQLASATLPEFFIDKCSLDTKLASLIALLSKSLNGDLPLRVSDGNIFVDEFHNDLKRLRHNQEHSQEWIWEYQERIRKETGIKKLKICFAQALGYYIEVSSEFAPQLPKDFIRRQSRLHAERFTTIELQQFQDDMSNISEKLQTLETQFFKDLCSHILQLRTEILALSQSLADLDYIISL
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: TRMILLTGPNMAGKSTYIRQIALLVIMAQMGSYIPAKSAHIGVIDKIFTRIGAGDNLSKGMSTFMVEMAETANILHNATDRSLVILDEVGRGTSTYDGLAIAQAVVEYLLFTDKKKAKTLFATHYKELTTLEDHCPHVENFHAGVKDKAGQPVFLYEILKGHSQKSFGIHVARLAGFPLCVVSRAQQIL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: QGKNSLLRIMDHTSTPMGGRLLRQILISPFYNPKEILVRQDAVEFFLRQVTLRKNIKTYLCQVRDIERLMTKVTTGLAGPRDIGTLRDSFSAGAQIYEQLASATLPEFFIDKCSLDTKLASLIALLSKSLNGDLPLRVSDGNIFVDEFHNDLKRLRHNQEHSQEWIWEYQERIRKETGIKKLKICFAQALGYYIEVSSEFAPQLPKDFIRRQSRLHAERFTTIELQQFQDDMSNISEKLQTLETQFFKDLCSHILQLRTEILALSQSLADLDYIISLADLAHAQGYCRPRVDMSDTLCIYRGCHPVAKT
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core
Protein sequence:
MPTYTKLTAMGQYVPGRVVDNDELAAIMDTSDEWIQAHTGIKTRHYAMNDENTSDLATQVAQQLLQKSGLAASAIDLILVTTITPDALTPATACLVQANIGADNAFAFDLSAACAGFTFGLATADKFIRSGQYQNVMVISAEVNSKMMDFQDRTAAVFFGDGAGGALLQATDNPDENSLIAEKLESQGNATVIHSGRVRPITEVAATNYPQTDAFYQVGRDVFQFATTVVPEQMRGLIASAQLTPSDLQYVICHQANLRIIEKIAANLALPMTKFPHNVDHYGNTSSAGVAMALANVFDTLTGPVLLTAFGGGLAYGSVLIKK

Annotated regions:
phrase: FDLSAACAGFTFGLATADKFIRSGQYQNVMVISAEVNSKMMDFQDRTAAVFFGDGAGGALLQATDNPDENSLIAEKLESQ
type: DOMAIN
name: ACP_syn_III_N
description: Beta-ketoacyl-[acyl-carrier-protein] synthase III, N-terminal

phrase: ASAQLTPSDLQYVICHQANLRIIEKIAANLALPMTKFPHNVDHYGNTSSAGVAMALANVFDTLTGPVLLTAFGGGLAYGSVLI
type: DOMAIN
name: ACP_syn_III_C
description: Beta-ketoacyl-[acyl-carrier-protein] synthase III, C-terminal
Protein sequence:
MNLQKFPRYPLTFGPTPIQPLKRLSAHLGGKVELYAKRDDCNSGLAFGGNKTRKLEYLIPDALAQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYHDAVYDRVGNIQMSRMMGADVRLVPDGFDIGFRKSWEDALADVRARGGKPYAIPAGCSDHPLGGLGFVGFAEEVRAQEAELGFKFDYVVVCSVTGSTQAGMVVGFAADGRADRVIGIDASAKPAQTREQILRIARNTADRVELGRDIASGDVVLDERFGGPEYGLPNEGTLEAIRLCAKLEGVLTDPVYEGKSMHGMIEKVRLGEFPAGSKVLYAHLGGVPALNAYSFLFRDG

Annotated regions:
phrase: TFGPTPIQPLKRLSAHLGGKVELYAKRDDCNSGLAFGGNKTRKLEYLIPDALAQGCDTLVSIGGIQSNQTRQVAAVAAHLGMKCVLVQENWVNYHDAVYDRVGNIQMSRMMGADVRLVPDGFDIGFRKSWEDALADVRARGGKPYAIPAGCSDHPLGGLGFVGFAEEVRAQEAELGFKFDYVVVCSVTGSTQAGMVVGFAADGRADRVIGIDASAKPAQTREQILRIARNTADRVELGRDIASGDVVLDERFGGPEYGLPNEGTLEAIRLCAKLEGVLTDPVYEGKSMHGMIEKVRLGEFPAGSKVLYA
type: DOMAIN
name: TrpB-like_PALP
description: Tryptophan synthase beta chain-like, PALP domain
Protein sequence:
MFLDELISEFDRGLRSMTGVSRMSRPLPVPQESKVTEPAVELSPAERAHAAGLMRVNHVGEVCAQALYQAQKLATKSPSLRAVFDRAAIEEEDHLAWTSKRLEALDSRPSLLNPLWYTGALAIGLAAGRMGDRVSLGFMAETERQVELHLDSHLDELPAADHESRAIVEQMRVDEAEHGKAAMEAGGLELPFPARALMRAVSKVMTRTAYYI

Annotated regions:
Protein sequence:
MKCLLLALGLSLMCGNQATDIPQTMQDLDLQEVAGRWHSVAMVASDISLLDSESVPLRVYVEELRPTPEGNLEIILREGANHACVERNIVAQKTEDPAVFTVNYQGERKISVLDTDYAHYMFFCVGPPLPSAEHGMVCQYLARTQKVDEEVMEKFSRALQPLPGRVQIVQDPSGGQERCGF

Annotated regions:
phrase: AGRWHSVAMVASDISLLDSESVPLRVYVEELRPTPEGNLEIILREGANHACVERNIVAQKTEDPAVFTVNYQGERKISVLDTDYAHYMFFCVGPPLPSAEHGMVCQYLARTQKVDEEVMEKFSRALQP
type: DOMAIN
name: Lipocln_cytosolic_FA-bd_dom
description: Lipocalin/cytosolic fatty-acid binding domain

phrase: DLDLQEVAGRWHS
type: CONSERVED_SITE
name: Lipocalin_CS
description: Lipocalin family conserved site
Protein sequence:
MGKTNYSREPANQAKAVKTSASDLRVHFKNTYEVVRAIKGLNLENAKRYLKAVIDRKRCIPFTRFTGCIGRTAQAHEFGRTQGRWPVKSVKVILGLLDNLSANAQAKSLNTANLVIQHGQVNRAQKGRRRTYRAHGRINPYLNSGCHVEIFAQEVAAKVRKEAPKDAAKKVPKTKKGKLAIGN

Annotated regions:
Protein sequence:
MSLPELKNFRRIVVKVGSSLLIDSAAGEVRATWLAALAADIAALHRDGRDVMVVSSGSIALGRSRLKLPRGPLKLEESQAAAAVGQIALARIWSEVLGAHGIGAGQILVTFQDTEERRRYLNARSTIAKLLEWRAVPVINENDTVATAEIRYGDNDRLAARVATMASADLLILLSDIDGLYTAPPVANPDAELIPVVESVSAEIEAMAGGAESELSRGGMYTKIEAAKIATTAGTHMLIANGKIEHPLQAIADGGRCTWFLTPANPVTARKRWIAGSLEPKGTLTIDAGAVTALRAGKSLLPAGVIRVDGQFARGDAVLVRGPDTHEIGRGLVAYDAEDADKIKGRSSPDVLIILGISGRSEMIHRDDLVIGSVPGV

Annotated regions:
phrase: RIVVKVGSSLLIDSAAGEVRATWLAALAADIAALHRDGRDVMVVSSGSIALGRSRLKLPRGPLKLEESQAAAAVGQIALARIWSEVLGAHGIGAGQILVTFQDTEERRRYLNARSTIAKLLEWRAVPVINENDTVATAEIRYGDNDRLAARVATMASADLLILLSDIDGLYTAPPVANPDAELIPVVESVSAEIEAMAGGAESELSRGGMYTKIEAAKIATTAGTHMLIANGKIEHPLQAIADGGRCTWF
type: DOMAIN
name: G5K_ProB
description: Glutamate-5-kinase domain

phrase: SELSRGGMYTKIEAAKI
type: CONSERVED_SITE
name: Glutamate_5-kinase_CS
description: Glutamate 5-kinase, conserved site

phrase: RIVVKVGSSLLIDSAAGEVRATWLAALAADIAALHRDGRDVMVVSSGSIALGRSRLKLPRGPLKLEESQAAAAVGQIALARIWSEVLGAHGIGAGQILVTFQDTEERRRYLNARSTIAKLLEWRAVPVINENDTVATAEIRYGDNDRLAARVATMASADLLILLSDIDGLYTAPPVANPDAELIPVVESVSAEIEAMAGGAESELSRGGMYTKIEAAKIATTAGTHMLIA
type: DOMAIN
name: Asp/Glu/Uridylate_kinase
description: Aspartate/glutamate/uridylate kinase

phrase: GTLTIDAGAVTALRAGKSLLPAGVIRVDGQFARGDAVLVRGPDTHEIGRGLVAYDAEDADKIKGRSSPD
type: DOMAIN
name: PUA
description: PUA domain

phrase: GTLTIDAGAVTALRAGKSLLPAGVIRVDGQFARGDAVLVRGPDTHEIGRGLVAYDAEDADKIKGRSSPDVLIILGISGRSEM
type: DOMAIN
name: PUA
description: PUA domain