nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MLTLNMNLNYQIDNYCLNISFLSLFISMICYWLVIAFPKKIFFLKFAHFEVSLANILLVYLLAYRWLKYSYFPLSNLYESLLFLSWSLTTIQLILEFKFKHKLIGAIASPISTLTLAFSSFFLPKYMQEVSPLIPALKSNWLLMHVSVILISYAMLLIGSLLSILFLLLSRNNKLNYTKNNNLTTASNSNDTLILKNEDKLNLLNTIDNLSYRIIGLGFPFLTIGIISGAVWANEAWGSYWSWDPKETWALITWIIFAIYLHTRINKSWQGKKSAIVAGFGFVVVWICYLGVNFLGKGLHSYGWFL

Annotated regions:
phrase: LSNLYESLLFLSWSLTTIQLILEFKFKHKLIGAIASPISTLTLAFSSFFLPKYMQEVSPLIPALKSNWLLMHVSVILISYAMLLIGSLLSILFLLLSRNNKLNYTKNNNLTTASNSNDTLILKNEDKLNLLNTIDNLSYRIIGLGFPFLTIGIISGAVWANEAWGSYWSWDPKETWALITWIIFAIYLHTRINKSWQGKKSAIVAGFGFVVVWICYLGVNFLGKGL
type: DOMAIN
name: Cyt_c_assembly
description: Cytochrome c assembly protein
Protein sequence:
MTQIHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDNGDGIDPSNYEFLALKHYTSKIAKFQDVAKVQTLGFRGEALSSLCGIAKLSVITTTSPPKADKLEYDMVGHITSKTTTSRNKGTTVLVSQLFHNLPVRQKEFSKTFKRQFTKCLTVIQGYAIINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEEVDLVLDLNPFKNRMLGKYTDDPDFLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYSTLLKCCNEVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFKTTLSDYYNRQELALPKRMCSQSEQQAQKRLKTEVFDDRSTTHESDNENYHTARSESNQSNHAHFNSTTGVIDKSNGTELTSVMDGNYTNVTDVIGSECEVSVDSSVVLDEGNSSTPTKKLPSIKTDSQNLSDLNLNNFSNPEFQNITSPDKARSLEKVVEEPVYFDIDGEKFQEKAVLSQADGLVFVDNECHEHTNDCCHQERRGSTDTEQDDEADSIYAEIEPVEINVRTPLKNSRKSISKDNYRSLSDGLTHRKFEDEILEYNLSTKNFKEISKNGKQMSSIISKRKSEAQENIIKNKDELEDFEQGEKYLTLTVSKNDFKKMEVVGQFNLGFIIVTRKVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKLIIPQPVELSVIDELVVLDNLPVFEKNGFKLKIDEEEEFGSRVKLLSLPTSKQTLFDLGDFNELIHLIKEDGGLRRDNIRCSKIRSMFAMRACRSSIMIGKPLNKKTMTRVVHNLSELDKPWNCPHGRPTMRHLMELRDWSSFSKDYEI

Annotated regions:
phrase: ISSVFGAGGMRGLEEVDLVLDLNPFKNRMLGKYTDDPDFLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYSTLLKCCNEVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFKTTLSDYY
type: DOMAIN
name: DNA_mismatch_S5_2-like
description: DNA mismatch repair protein, S5 domain 2-like

phrase: VVGQFNLGFIIVTRKVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKLIIPQPVELSVIDELVVLDNLPVFEKNGFKLKIDEEEEFGSRVKLLSLPTSKQTLFDLGDFNELIHLIKEDGGLRRDNIRCSKIRSMFAMRACRSSIMIGKP
type: DOMAIN
name: MutL_C
description: MutL, C-terminal, dimerisation

phrase: KIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYSTLLKCCNEVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFKTTLSD
type: DOMAIN
name: DNA_mismatch_S5_2-like
description: DNA mismatch repair protein, S5 domain 2-like

phrase: VGQFNLGFIIVTRKVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKLIIPQPVELSVIDELVVLDNLPVFEKNGFKLKIDEEEEFGSRVKLLSLPTSKQTLFDLGDFNELIHLIKEDGGLRRDNIRCSKIRSMFAMRACRSSIMIGKP
type: DOMAIN
name: MutL_C
description: MutL, C-terminal, dimerisation

phrase: GFRGEA
type: CONSERVED_SITE
name: DNA_mismatch_repair_CS
description: DNA mismatch repair, conserved site
Protein sequence:
MAIGKRLNKAREGVDREKLYPLAEAIKMVKERAKAKFDETIEVAINLGVDPRHADQMVRGVVTLPNGTGRTLRVGVFARGAKADEAKAAGADVVGAEDLVEKVQNGSIDFDRCIATPDMMPLVGRLGKVLGPRGLMPNPKIGTVTMDVTGAVKGAKGGSVEFRVEKAGILQAGVGKASFSEEKLVENIKALADAVSKAKPAGSKGTYIQRVAVSSTMGPGVKVEPGTILG

Annotated regions:
phrase: MMPLVGRLGKVLGPRGLMP
type: CONSERVED_SITE
name: Ribosomal_uL1_CS
description: Large ribosomal subunit protein uL1, conserved site
Protein sequence:
MAESKLIFVTGNPMKLEEVRYILKEADMEIDSKDLDIPELQGTTEEIAVEKCRRAAELLGGPCITEDTALCFEALNGLPGPYIKHFLKELGLDGLNTLLIGFPTTAAYALCTFAYSSGPGTEPMLFVGRTDGKIVPPRGPGKFGWNPIFEVEGTGKTFAEMSDAEKNSISHRFRALEKLKVHLRSLTHN

Annotated regions:
Protein sequence:
MELEQLNELLKKHELELVIGLETHVRLNTKSKLFCSCPNEEIDTPNQNICSVCTGQMGVLPSINKEAITKAIYFGKAVKSTFENEVISWDRKHYEYPDNPKNIQITQFHNPVIPDGQVSCFRNDGSQFTVNLTQVHIEEDAAKLMHEKKISLVDFNKAGVPLIEIVTEPCIRHIEDASTYAQYIQRIVQNLKISEANLEKGEFKSDVSVSLRKKQSYELNPRTEIKNLNSFKFMIDALKEEVEKQLNYYVENKAFRPDQTTVLWDADLKQTKTMRKKEFEADYRFISEPDLPFVSIKDVVESIDVDLSTLPFAVESILIKGGVLPQDAKFFTADSLRSETFVAINNELKDPSFVAKTLTNNIKAEDYTSIENIADFIEIFSLFKNENVTPVLAQNAIKSLLEDSKFDYKTYFEANTISEEKIENAIAKVISENEAVANDIKSGNQGKAGILVGKVIAIIGKGASGKVIREGILKQVQTSGANIEAVAASQQPETNKVQTVKQKEEEVLPEIPLIIKDEYRTHLISDVSEDNIAETVTFSGWVSSVRDHGELMFIDLRDSSTQIFQVRLSRESFANLDELVKLKPESVITVTGTIVQRKEDDYNAALKTGTIELEATDLDILNLSKTLPFEIKRATKTNENVRFQYKYLDHRNDDVRRVIVNRHKVIKMMRDILDDQEFLEIETPILSAGTDEGAREFIVPTRKQAGAFYTLPQAPQQFKQMLMVSGYEKYFQIARCFRDEDSRGDRQPEFTQLDIEMAYASMQQIIDL

Annotated regions:
phrase: RHKVIKMMRDILDDQEFLEIETPILSAGTDEGAREFIVPTRKQAGAFYTLPQAPQQFKQMLMVSGYEKYFQIARCFRDEDSRGDRQPEFTQLDIEMAYASMQQIID
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: FVAINNELKDPSFVAKTLTNNIKAEDYTSIENIADFIEIFSLFKNENVTPVLAQNAIKSLLEDSKFDYKTYFEANTISEEKIENAIAKVISENEAVANDIKSGNQGKAGILVGKVIAIIGKGASGKVIREGIL
type: DOMAIN
name: Asn/Gln_amidotransferase
description: Asn/Gln amidotransferase

phrase: VTFSGWVSSVRDHGELMFIDLRDSSTQIFQVRLSRESFANLDELVKLKPESVITVTGTIVQRKEDDYNAALKTGTIELEATDLD
type: DOMAIN
name: NA-bd_OB_tRNA
description: OB-fold nucleic acid binding domain, AA-tRNA synthetase-type

phrase: RTHLISDVSEDNIAETVTFSGWVSSVRDHGELMFIDLRDSSTQIFQVRLSRESFANLDELVKLKPESVITVTGTIVQRKEDDYNAALKTGTIELEATDLDILNLSKTLPFEIKRATKTNENVRFQYKYLDHRNDD
type: DOMAIN
name: Asp-tRNA-ligase_1_N
description: Aspartate-tRNA ligase, type 1, anticodon recognition domain

phrase: NENVRFQYKYLDHRNDDVRRVIVNRHKVIKMMRDILDDQEFLEIETPILSAGTDEGAREFIVPTRKQAGAFYTLPQAPQQFKQMLMVSGYEKYFQIARCFRDEDSRGDRQPEFTQLDIEMAYASMQQIID
type: DOMAIN
name: Aa-tRNA-synt_II
description: Aminoacyl-tRNA synthetase, class II (D/K/N)

phrase: LVIGLETHVRLNTKSKLFCSCPNEEIDTPNQNICSVCTGQMGVLPSINKEAITKAIYFGKAVKSTFENEVISWDRKHYEYPDNPKNIQITQFHNPVIPDGQVSCFRNDGSQFTVNLTQVHIEEDAAKLMHEKKISLVDFNKAGVPLIEIVTEPCIRHIEDASTYAQYIQRIVQNLKISEANLEKGEFKSDVSVSLRKKQSYELNPRTEIKNLNSFKFMIDALKEEVEKQLNYYVENKAFRPDQTTVLWDADLKQTKTMRKKEFEADYRFISEPDLPFVSIK
type: DOMAIN
name: Asn/Gln-tRNA_Trfase_suB/E_cat
description: Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic
Protein sequence:
MADVIKNEVGSFPPGKKITVVFVIGGPGSGKGTQCSKIVKHFGFTHLSAGDLLREEAKSDTEQGMMIKNMMHEGKLVPSELIVKLLFKAMLQSGNDKFLVDGFPRNEENRQAYDSIISIEPEFVLFIDCPKEEMERRILNRNQGRDDDNIDTARRRFEVFQESTMPVVQYYEKRGKLRRVDGAKSADEVFEDVKAIFVQLNTQANQGGNVSRARSNPFKRFLELFCGCFGTQEAPRQQTDK

Annotated regions:
phrase: FLVDGFPRNEE
type: CONSERVED_SITE
name: Adenylat_kinase_CS
description: Adenylate kinase, conserved site
Protein sequence:
MDAFKLLTRSTNLKTGRAAATSAAQTSRLPSTGKAANPQLFHNSEADRLLEEKKKHGQKRKRGHGADDAGSEDEDAADLDFFSSAKRASTGGAVAGKRHQEQASADKDGDSGSEDGSEMDEVQRRTVLNAHKIKVTDLRDLDQIQSTNAQTLQTEEPKKKKKKKAKAQQEEPKTLTKKEQKKARRLFPQPLVSFKELRTKYKISRRLAENIAEQGFTVPTEVQLGTLPLQLGDSSVQQASKPGETVEPDLLVVAPTGSGKTLSFLIPVINKIVRHHHEQPDERGIFAVVVAPTKELASQIVNEGRKLVQGTGVKITLMKKGMQVVERDGDGDSDEKDVLDEDSADSGSDSEDDEQTTDKKTKGKAPVTKSDILVTTPLLLVNALSANRTKPLAALPLVRNIVLDEADVLLDPLFREQTLDIWRSCTHPELRASLWSATMGSNVEDLAKSTIQERKDLSGTTKSYPLIRLVVGLKDSAIPNIQHKLVYAATEQGKLLGLRQLLHPTARTATDVHLRPPFLIFTQTIPRAVALHSELLYDIPPEAGGSSRIAVLHSELSDSQRSEIMKGFRKGEIWILVTTDLLARGVDFRGINGVVNYDIPNSAAVYVHRVGRTGRAGREGGVAVTYYTKEDIPYVKSIANIIDVSEKLRGAGGEKSVQKWLLDSLPDLSKKDKKELKKHGVKARQSNLKSIKDNKEFRQAKISTKSGYERRMENKKKGAIAASRNRKSQPQAPSTGADSGDDSWSGLED

Annotated regions:
phrase: VEPDLLVVAPTGSGKTLSFLIPVINKIVRHHHEQPDERGIFAVVVAPTKELASQIVNEGRKLVQGTGVKITLMKKGMQVVERDGDGDSDEKDVLDEDSADSGSDSEDDEQTTDKKTKGKAPVTKSDILVTTPLLLVNALSANRTKPLAALPLVRNIVLDEADVLLDPLFREQTLDIWRSCTHPELRASLWSATMGSNVED
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: GLRQLLHPTARTATDVHLRPPFLIFTQTIPRAVALHSELLYDIPPEAGGSSRIAVLHSELSDSQRSEIMKGFRKGEIWILVTTDLLARGVDFRGINGVVNYDIPNSAAVYVHRVGRTGRAGREGGVAVTYYTKEDIPYVKSIANIIDVSEKLRGAGGEKSVQKWLLDS
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: LAENIAEQGFTVPTEVQLGTLPLQLGDSSVQQASKPGETVEPDLLVVAPTGSGKTLSFLIPVINKIVRHHHEQPDERGIFAVVVAPTKELASQIVNEGRKLVQGTGVKITLMKKGMQVVERDGDGDSDEKDVLDEDSADSGSDSEDDEQTTDKKTKGKAPVTKSDILVTTPLLLVNALSANRTKPLAALPLVRNIVLDEADVLLDPLFREQTLDIWRSCTHPELRASLWSATMGSNVEDLAKSTIQERKDLSGTTKSYPLIRLVV
type: DOMAIN
name: DDX52/Rok1_DEADc
description: DDX52/Rok1, DEAD-box helicase domain

phrase: GFTVPTEVQLGTLPLQLGDSSVQQASKPGETVEPDLLVVAPTGSGKTLSFLIPVINKIVRHHHEQPDERGIFAVVVAPTKELASQIVNEGRKLVQGTGVKITLMKKGMQVVERDGDGDSDEKDVLDEDSADSGSDSEDDEQTTDKKTKGKAPVTKSDILVTTPLLLVNALSANRTKPLAALPLVRNIVLDEADVLLDPLFREQTLDIWRSCTHPELRASLWSATMGSNVEDLAKSTIQERKDLSGTTKSYPLIRL
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: PPFLIFTQTIPRAVALHSELLYDIPPEAGGSSRIAVLHSELSDSQRSEIMKGFRKGEIWILVTTDLLARGVDFRGINGVVNYDIPNSAAVYVHRVGRTGRA
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: VALHSELLYDIPPEAGGSSRIAVLHSELSDSQRSEIMKGFRKGEIWILVTTDLLARGVDFRGINGVVNYDIPNSAAVYVHRVGRTGRA
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: KPGETVEPDLLVVAPTGSGKTLSFLIPVINKIVRHHHEQPDERGIFAVVVAPTKELASQIVNEGRKLVQGTGVKITLMKKGMQVVERDGDGDSDEKDVLDEDSADSGSDSEDDEQTTDKKTKGKAPVTKSDILVTTPLLLVNALSANRTKPLAALPLVRNIVLDEADVLLDPLFREQTLDIWRSCTHPELRASLWSATMGSNVEDLAKSTIQERKD
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain
Protein sequence:
MNIVVGVTGGIAAYKTVHLVRLLTKAGHDVTVVPTEDALRFVGTPTWEALSRHPVTTSVHDDVARVRHVALGQGADLVIVAPATANSIAKITAGIADDLLGTTLLATEAPVLLAPAMHAEMWRNAATRANIATLRSRGIHLVGPADGELAGGDSGPGRMAEPEEILEAAVALLGPHDLDGVRIVVSAGGTREPIDPVRYLGNRSSGRQGVALAAEAASRGADVTLVAANVSDDVLAAARHPAVRMVPVATAAELATAMKDAAREADIVIMAAAVADYRPASVADQKLTKEQGALTRLELVENEDVVAALATLRSEGAAPDGQTIVAFAAETSPDAHERRERARRKRARKGVDLLAVNLVNAEQGFEQPDNAVEIVGDGGEVVASVAGTKREVATGILDAVRAVR

Annotated regions:
phrase: DGVRIVVSAGGTREPIDPVRYLGNRSSGRQGVALAAEAASRGADVTLVAANVSDDVLAAARHPAVRMVPVATAAELATAMKDAAREADIVIMAAAVADYRPASVADQKLTKEQGALTRLELVENEDVVAALATLRSEGAAPDGQTIVAFAAETSPDAHERRERARRKRARKGVDLLAVNLVNAEQGFEQPDNAVE
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal

phrase: MNIVVGVTGGIAAYKTVHLVRLLTKAGHDVTVVPTEDALRFVGTPTWEALSRHPVTTSVHDDVARVRHVALGQGADLVIVAPATANSIAKITAGIADDLLGTTLLATEAPVLLAPAMHAEMWRNAATRANIATLRSRGIHLVGPADGELAGGDSGPGRMAEPEEILEAA
type: DOMAIN
name: Flavoprotein
description: Flavoprotein
Protein sequence:
MAATLKSLKLVRYRAFCSPSAFGAVRSVSYWNVSSTQHGGQDPPEHISLCHSAKKVKNICSTFSSRRILTTSSAHPGLEFSKTSSSKASTLQLGSPRATGVDEEDVEVFDSFENMRVFLQLRPEYRVHSYNASETSQLLSVSEGELILHKVRVNQNNLQAQVIVDYLCKLSSLPAEQHPVLLGSTSFALLCQLSVKKIQLFDTQDLINVLKAFVILGIPHSHSMLDVYETKCCHQVWEMNMDQLLLVADLWRYLGRKVPRFLNIFSSYLNLHWKDLSLSQLVHLIYVIGENRQVSQDLMQKLESLILKYIDLINLEEVGTICLGFFKSSTNLSEFVMRKIGDLACANIQHLSSRSLVNIVKMFRFTHVDHINFMKQIGEIAPQRIPSLGVQGVMHLTLYCSALRFLNEGVMNAVAASLPPRVAHCRSKDVAKILWSFGTLNYKPPNAEEFYSSLISEIHRKMPEFNQYPEHLPTCLLGLAFLEYFPVELIDFALSPGFVRLAQERTKFDLLKELYTLDGTVGIECPDYRGNRLSTHLQQEGSELLWYLAEKDMNSKPEFLETVFLLETMLGGPQYVKHHMILPHTRSSDLEVQLDVNLKPLPFNREATPAENVAKLRLEHVGVSLTDDLMNKLLKGKARGHFQGKTESEPGQQPMELENKAAVPLGGFLCNVADKSGAMEMAGLCPAACMQTPRMKLAVQFTNRNQYCYGSRDLLGLHNMKRRQLARLGYRVVELSYWEWLPLLKRTRLEKLAFLHEKVFTSAL

Annotated regions:
phrase: VQFTNRNQYCYGSRDLLGLHNMKRRQLARLGYRVVELSYWEWLPLLKRTRLEKLAFLHE
type: DOMAIN
name: RAP
description: RAP domain

phrase: KELYTLDGTVGIECPDYRGNRLSTHLQQEGSELLWYLAEKDMNSKPEFLETVFLLETMLGGPQYVKHHMILPHTRSSDLEVQLDVNLKPL
type: DOMAIN
name: FAST_2
description: FAST kinase-like protein, subdomain 2

phrase: VAKILWSFGTLNYKPPNAEEFYSSLISEIHRKMPEFNQYPEHLPTCLLGLAFLEYFPVELIDFALSPGFV
type: DOMAIN
name: FAST_Leu-rich
description: FAST kinase leucine-rich

phrase: QFTNRNQYCYGSRDLLGLHNMKRRQLARLGYRVVELSYWEWLPLLKRTRLEKLAFLHE
type: DOMAIN
name: RAP
description: RAP domain

phrase: LAVQFTNRNQYCYGSRDLLGLHNMKRRQLARLGYRVVELSYWEWLPLLKRTRLEKLAFLH
type: DOMAIN
name: RAP
description: RAP domain
Protein sequence:
MRVRETQTNWPNLWKWGTLILGLVIICSASDNLWVTVYYGVPVWRDADTTLFCASDAKAHETEVHNIWATHACVPTDPNPQEIYLKNVTENFNMWKNNMAEQMHEDVISLWDESLKPCVKLTPLCVTLNCTNAKLTNATVNTTNTNGIIGNMTDEVRNCTFNITTELIDKTKRVHALFYKLDLVQIGSNINSSEYSEYRLINCNTSVIKQACPKVSFDPIPIHYCTPAGYAILKCNDKKFNGTGPCNNVSSVQCTHGIKPVVSTQLLLNGSLAEGEIIIRSENLTNNAKTIIVHLNESVEINCTRPSNNRRVRLTIGPGKVFYRTGDIIGDIRKAYCQINGTKWNKTIEQVIKKLREHFDNKDNKTIIFQPSSGGDLEITTHHFTCRGEFFYCNTANLFNTTNPINITSNITLPCRIKQIINMWQRVGQAMYAPPISGSINCRSNITGILLTRDGGNNNSTNGTEIFRPGGGNIKDNWRSELYKYKVVQIDPLGIAPTRAKRRVVEREKRAVGLGIMIFGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQKFLGLWGCSGKIICTTAVPWNATWSNKTYEEIWNNMTWTEWEREISNYTNQIYDILTESQNQQDKNERDLLELDKWASLWNWFDITKWLWYIKIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQTPTHQQEEPDRPEGIEEGGGEQGRNRSVRLVNGFLALAWDDLRNLCLFSYH

Annotated regions:
phrase: VQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQKFLGLWGCSGKIICTTAVPWNATWSNKTYEEIWNNMTWTEWEREISNYTNQIYDILTESQNQQDKNERDLLELD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQKFLGLWGCSGKIICTTAVPWNATWSNKTYEEIWNNMTWTEWEREISNYTNQIYDILTESQNQQDKNERDLLELDKWASLWNWFDITKWLWYIKIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQTPT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWRDADTTLFCASDAKAHETEVHNIWATHACVPTDPNPQEIYLKNVTENFNMWKNNMAEQMHEDVISLWDESLKPCVKLTPLCVTLNCTNAKLTNATVNTTNTNGIIGNMTDEVRNCTFNITTELIDKTKRVHALFYKLDLVQIGSNINSSEYSEYRLINCNTSVIKQACPKVSFDPIPIHYCTPAGYAILKCNDKKFNGTGPCNNVSSVQCTHGIKPVVSTQLLLNGSLAEGEIIIRSENLTNNAKTIIVHLNESVEINCTRPSNNRRVRLTIGPGKVFYRTGDIIGDIRKAYCQINGTKWNKTIEQVIKKLREHFDNKDNKTIIFQPSSGGDLEITTHHFTCRGEFFYCNTANLFNTTNPINITSNITLPCRIKQIINMWQRVGQAMYAPPISGSINCRSNITGILLTRDGGNNNSTNGTEIFRPGGGNIKDNWRSELYKYKVVQIDPLGIAPTRAKRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MDLQLTTNSTDSGDRGGSSNESLQRQPPSQYSPAEVAGLAAVVSFLIVFTIVGNVLVVIAVLTSRALKAPQNLFQVSLASADILVATLVMPFSLANELMNYWYFGKVWCVIYLALDVLFCTSSIVHLCAISLDRYWSVTQAVEYNLKRTPRRIKGIIVTVWLISAVISFPPLISLYRDPEDDLYPQCELNDETWYILSSCIGSFFAPCIIMVLVYVRIYRVAKLRTRTLSEKRTVPEGSSQTENGLSRPPVGAGPSTAAAAAASLRLQAGENGHYHLHHHHHHLHHHHHHHHHQLRKSAELEDIELEESSTSENRRRRRSREEAAARKGSRGFSFSFSSTKGGQSAGAGSRLSRASNRSLEFFSTHRRRKRSSLCRRKVTQAREKRFTFVLAVVMGVFVVCWFPFFFTYSLYGICREACQVPETLFKFFFWIGYCNSSLNPVIYTIFNQDFRRSFKHILFKKKKKTSLQ

Annotated regions:
phrase: GNVLVVIAVLTSRALKAPQNLFQVSLASADILVATLVMPFSLANELMNYWYFGKVWCVIYLALDVLFCTSSIVHLCAISLDRYWSVTQAVEYNLKRTPRRIKGIIVTVWLISAVISFPPLISLYRDPEDDLYPQCELNDETWYILSSCIGSFFAPCIIMVLVYVRIYRVAKLRTRTLSEKRTVPEGSSQTENGLSRPPVGAGPSTAAAAAASLRLQAGENGHYHLHHHHHHLHHHHHHHHHQLRKSAELEDIELEESSTSENRRRRRSREEAAARKGSRGFSFSFSSTKGGQSAGAGSRLSRASNRSLEFFSTHRRRKRSSLCRRKVTQAREKRFTFVLAVVMGVFVVCWFPFFFTYSLYGICREACQVPETLFKFFFWIGYCNSSLNPVI
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM
Protein sequence:
MSNPPHGGVLKDLIARDAPRQASLKLAAAGLPSITLTERNICDLELILNGGFSPLEGFLNQRDYESVVSNMRLADGSLWPMPINLDVSQEQINSLGLKSGARVALRDPIDDSALAILTIEDIYQPDKHREAVFVFGDDDLAHPAVDYLHKQIKAFYLSAHYDYVENRYTPSELRAHFKKLNWSRVVAFQTRNPMHRAHRELTVRAARDRQCNVLIHPVVGMTKPGDIDHYTRVREWHPLLLPLAMRMAGPREALWHAIIRKNYGCTHFIVGRDHAGPGKNSKGVDFYGPYDAQDLVAKYKDELHIEVVPFQMVAYVPDTDEYIPQDELPAGTKTLNISGTELRRRLKTGAAIPDWFTYPDVQTILRSQNPPRSKQGFTVLLTGYWNSGASIIAEALQVVLNQDGQRPTTLLKGETIRSELSKELGFTKKDRDANIKRIAFVAGEVTKCGGAVICSPIAPYESARQEAKKTISEQGGFFLVHVATPLEYCIANDRTGTYAKAQRGEIKGFTGIDDPYEVPTNPNLRVDASIHPVSQIVHEIILLLEKEGYIGER

Annotated regions:
phrase: NRYTPSELRAHFKKLNWSRVVAFQTRNPMHRAHRELTVRAARDRQCNVLIHPVVGMTKPGDIDHYTRVREWHPLLLPLAMRMAGPREALWHAIIRKNYGCTHFIVGRDHAGPGKNSKGVDFYGPYDAQDLVAKYKDELHIEVVPFQMVAYVPDTDEYIPQDELPAGTKTLNISGTELRRRLKTGAAIPDWFTYPDVQTILR
type: DOMAIN
name: Sulfurylase_cat_dom
description: Sulphate adenylyltransferase catalytic domain

phrase: PPHGGVLKDLIARDAPRQASLKLAAAGLPSITLTERNICDLELILNGGFSPLEGFLNQRDYESVVSNMRLADGSLWPMPINLDVSQEQINSLGLKSGARVALRDPIDDSALAILTIEDIYQPDKHREAVFVFGDDDLAHPAVDYLHKQIKAFYL
type: DOMAIN
name: ATP-Sase_PUA-like_dom
description: ATP-sulfurylase PUA-like domain
Protein sequence:
MKKFTQIIDQQKALELTSTEKPKLTLCLTMDERTKSRLKVALSDGQEAGLFLPRGTVLKEGDILLSEEGDVVTIEAAKEQVSTVYSDDPLLLARVCYHLGNRHVPLQIEAGWCRYFHDHVLDDMARGLGATVVVGLEKYQPEPGAYGGSSGGHHHHHDHHH

Annotated regions:
phrase: IIDQQKALELTSTEKPKLTLCLTMDERTKSRLKVALSDGQEAGLFLPRGTVLKEGDILLSEEGDV
type: DOMAIN
name: UreE_N
description: UreE urease accessory, N-terminal

phrase: EQVSTVYSDDPLLLARVCYHLGNRHVPLQIEAGWCRYFHDHVLDDMARGLGATVVVGLEKYQPEPGAYGGSSGGHHHHHDHH
type: DOMAIN
name: UreE_C_dom
description: Urease accessory protein UreE, C-terminal domain

phrase: STEKPKLTLCLTMDERTKSRLKVALSDGQEAGLFLPRGTVLKEGDILLSEEGDV
type: DOMAIN
name: UreE_N
description: UreE urease accessory, N-terminal
Protein sequence:
MTFHRIPGWFDHGVRKKVADPDSDASGYTYFGLEKLPADRKKQVVLAHFNRVAPRYDFMNTVLSFGIHYAWKRNAVAMLGLKPGDRVLDVCGGTGDLAVYAAGWIGAQGRAVIYDMNHEMMRAGVMRPQNRKYRDRIFCVLGDAEEMALPDNAFDAAMVGFGIRNLTSIRQGISEMHRVLKPGGRIMCLEFSKPVNPVFRALYDWYSFSVMPAAGRVLAGSDRSYACLSETIRMFATPEELAAMFEQAGFAKVRFTRLTNGIAAIHTGTKS

Annotated regions:
phrase: YDFMNTVLSFGIHYA
type: CONSERVED_SITE
name: UbiE/COQ5_MeTrFase_CS
description: UbiE/COQ5 methyltransferase, conserved site

phrase: RVLKPGGRIMCLEF
type: CONSERVED_SITE
name: UbiE/COQ5_MeTrFase_CS
description: UbiE/COQ5 methyltransferase, conserved site
Protein sequence:
MTDRLPHEKGFHISWDQIHRDSRALAWRLDGFGPEDGGWRAVVAITRGGMAPAMIVARELDIRTIDTVSIKSYHYQHQGEAELLKAPDASLMGDGSGILVIDDLVDSGKTLELVRQMYPKAHFATVYAKPKGREQVDTFITEVSQDTWIFFPWDMALQYVEPYRGVD

Annotated regions:
phrase: SWDQIHRDSRALAWRLDGFGPEDGGWRAVVAITRGGMAPAMIVARELDIRTIDTVSIKSYHYQHQGEAELLKAPDASLMGDGSGILVIDDLVDSGKTLELVRQMYPKAHFATVYAKPKGREQVDTFITEVSQDTWIFFPWDMALQ
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: SRALAWRLDGFGPEDGGWRAVVAITRGGMAPAMIVARELDIRTIDTVSIKSYHYQHQGEAELLKAPDASLMGDGSGILVIDDLVDSGKTLELVRQMYPKAHFATVYAKPKGREQ
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain
Protein sequence:
MKRALLDATAEELTAWMTGRGHPSYRARQVVRWVFDHRAESFDRMSDLPRGLRSELDTEWTVFETEIAHHHVSPDGTDKLLLRCRDGKTIECVLMAEADRRTVCISTQVGCGMGCVFCASGLKGVERNLSTGEILEQVLRLRNLLPPDDRLTNLVVMGMGESLANLDRLIPALDRLCSPEGLNFGQRRVTISTVGLPEKMRKLAELDRQYHLAVSLHAPTPRLRDELVPINAKVGLDAVMQAADAYFHRTGRQVTFEYVLLADLNDRPEDAEALGALLSGRKAHVNLIPYNPVAGLPYRRPSAEAVRRFERIVSGRGVSVSVRKTKGREIDAACGQLRRRLQADAGPEPGAVALIGQP

Annotated regions:
phrase: KRALLDATAEELTAWMTGRGHPSYRARQVVRWVFDHRAESFDRMSDLPRGLRSELDTEWTVFETEIAHHHVSPDGTDKLLLRCRDGKTIECVLMAEADRRTVCISTQVGCGMGCVFCASGLKGVERNLSTGEILEQVLRLRNLLPPDDRLTNLVVMGMGESLANLDRLIPALDRLCSPEGLNFGQRRVTISTVGLPEKMRKLAELDRQYHLAVSLHAPTPRLRDELVPINAKVGLDAVMQAADAYFHRTGRQVTFEYVLLADLNDRPEDAEALGALLSGRKAHVNLIPYNPVAGLPYRRPSAEAVRRFERIVSGRGVSVSVRKTKGREIDAACGQLRRRL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: ISTQVGCGMGCVFCASGLKGVERNLSTGEILEQVLRLRNLLPPDDRLTNLVVMGMGESLANLDRLIPALDRLCSPEGLNFGQRRVTISTVGLPEKMRKLAELDRQYHLAVSLHAPTPRLRDELVPINAKVGLDAVMQAADAYFHRTGRQVTFEYVLLADLNDR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: EADRRTVCISTQVGCGMGCVFCASGLKGVERNLSTGEILEQVLRLRNLLPPDDRLTNLVVMGMGESLANLDRLIPALDRLCSPEGLNFGQRRVTISTVGLPEKMRKLAELDRQYHLAVSLHAPTPRLRDELVPINAKVGLDAVMQAADAYFHRTGRQVTFEYVLLADLNDRPEDAEALGALLSGRKAHVNLIPYNPVAGLPYRRPSAEAVRRFERIVSGRGVSVSVRKTKGR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LLDATAEELTAWMTGRGHPSYRARQVVRWVFDHRAESFDRMSDLPRGLRSELDT
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MTRQLLRLATAGSVDDGKSTLIGRLMFDTDSLPLDHLDAVTRDGVPDLAALSDGLRAEQEQGITIDVAYRFFSTATRSYILADTPGHERYTRNMFTGASTADVAVLLVDARTGVLRQTRRHARISTLLGVEHLVAAVNKIDLIDYDEKRFREVEADLQKLALRLGGVELTVVPLAAKDGDNVVHRSSNTPWYAGPTLLEHLESIELTAPAAIPGEVRLPIQWVSRPVAGERRRYTGRLSAGTLAVGDAVVALPSGSRSTVTALDTLDDSRSIAVAPLSISVSLADDIDIGRGDVIVSGDDGAHEPVLAREIDATVCWFGATPLRAGDRVALKHTASTVRATVQALHTRLDPETLDEQDSPVELTLNDIGTVTLRTSSVIVADPYLGNRDAGAFILIDETSNDTVGAGTIGTAREVKPGEQTRNDIKWHPSALDRAHRWSSTGQRGATVWFTGLPASGKSTVAVALERALVESGRAAYLLDGDNVRHGLSDDLGFTPGDRAENIRRVGHLTRLLADAGVVAIASLVSPLESDRAIARALNDAADLTFIEVAVSTPLAECERRDPKGLYARARAGELKGLTGVDAPYEPPANPDLTIDTTGADIDQLVARVLEVLDGR

Annotated regions:
phrase: RLATAGSVDDGKSTLIGRLMFDTDSLPLDHLDAVTRDGVPDLAALSDGLRAEQEQGITIDVAYRFFSTATRSYILADTPGHERYTRNMFTGASTADVAVLLVDARTGVLRQTRRHARISTLLGVEHLVAAVNKIDLIDYDEKRFREVEADLQKLALRLGGVELTVVPLAAKDGDNVVHRSSNTPWYAGPTLLEHLESI
type: DOMAIN
name: CysN_GTP-bd
description: Sulfate adenylyltransferase subunit CysN, GTP-binding domain

phrase: DGLRAEQEQGITIDV
type: CONSERVED_SITE
name: G_TR_CS
description: Tr-type G domain, conserved site

phrase: IDATVCWFGATPLRAGDRVALKHTASTVRATVQALHTRLDPETLDEQDSPVELTLNDIGTVTLRTSSVIVADPYLGNRDAGAFILIDETSNDTVGAGT
type: DOMAIN
name: GTP-eEF1A_C
description: GTP-eEF1A, C-terminal domain

phrase: RLATAGSVDDGKS
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: EQGITIDV
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: ILADTPGHER
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: TGASTADVAVL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: LVAAVNKID
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: LLRLATAGSVDDGKSTLIGRLMFDTDSLPLDHLDAVTRDGVPDLAALSDGLRAEQEQGITIDVAYRFFSTATRSYILADTPGHERYTRNMFTGASTADVAVLLVDARTGVLRQTRRHARISTLLGVEHLVAAVNKIDLIDYDEKRFREVEADLQKLALRLGGVELTVVPLAAKDGDNVVHRSSNTPWYAGPTL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: LAREIDATVCWFGATPLRAGDRVALKHTASTVRATVQALHTRLDPETLDEQDSPVELTLNDIGTVTLRTSSVIVADPYLGNRDAGAFILIDETSNDTVGAGT
type: DOMAIN
name: CysN_NoDQ_III
description: Sulfate adenylyltransferase subunit CysN, Domain III

phrase: RQLLRLATAGSVDDGKSTLIGRLMFDTDSLPLDHLDAVTRDGVPDLAALSDGLRAEQEQGITIDVAYRFFSTATRSYILADTPGHERYTRNMFTGASTADVAVLLVDARTGVLRQTRRHARISTLLGVEHLVAAVNKIDLIDYDEKRFREVEADLQKLALRLGGVELTVVPLAAKDGDNVVHRSSNTPWYAGPTLLEHLESIELTAP
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain
Protein sequence:
MHIMEGYLPPEWAAFWYVFAIPFLVYGALRVKRIIEEKPSMKSLIAVSAGFIFVLSALKLPSVTGSCSHPTGTGIAVVFFGPAVTALLSAIVLLYQALLLAHGGITTLGANTASMGVIGPFVGWIAFKLLKNVNFRVAVFAAAMLSDLVTYVVTSLQLALAFPSSAGVAGIIKSAATFMGIFAVTQVPLSIIEGVVAVMLVSYIFEVRSDVLEVVKA

Annotated regions:
Protein sequence:
MKVMTTIQALTAEIQAAKQAHKTIGLVPTMGYLHEGHLTLAQTARAENDLVVMSIFVNPTQFGPNEDFESYPRDLPRDIALAESVGVDLVFAPSVEEMYPQDGGIRIHAGEQATILCGASRPGHFDGVLQVVAKLFHLTLPTRAYFGQKDAQQVAIITTMVRDFNFPLDMRVVPIVREEDGLAKSSRNIYLSESEREEAPAIHEALQLARDSFLATGDVREALAKAKAHIQIQTHGRIDYIELLAYPDLTPVTETTQQVLLAAAVYIGKTRLIDNSIFTVKEGL

Annotated regions:
phrase: VPTMGYLHEGHLTLAQTARAENDLVVMSIFVNPTQFGPNEDFESYP
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain
Protein sequence:
MSGALAGKRIVLGVSGGIAAYKAIDLARQLTLLGAEVQAVLTRSALAFVQPLSFEVLTGRTPISRMFPIEGASHPGDMPHISLTGHADLVVVAPATANLIGKFAGGIGDDFLSTLLLSARPPALVAPAMNPRMWASPAVQENVRKLKERGHFVMEPGVGRMARAEEGEGSGRMPEPEAILAEVLRFLAPPHDLAGMRLVVSAGPTRERWDAVRYLTNRSSGKMGYALAAAAAARGAEVTLVSGPAGLPGPPGLRTMRVESAAEMREAVLAAWKDAHAGIMAAAVSDYRPARATVHKQKKKEGPLTLTLERTADILAEMGKKKGKRLLVGFAAETGDLTKNAKDKLRRKGLDLIVANRVAGEEDAMGADSATAVLIRAGGKEEHFPRLRKDALASAILDRLAEMWQKVKSTE

Annotated regions:
phrase: KRIVLGVSGGIAAYKAIDLARQLTLLGAEVQAVLTRSALAFVQPLSFEVLTGRTPISRMFPIEGASHPGDMPHISLTGHADLVVVAPATANLIGKFAGGIGDDFLSTLLLSARPPALVAPAMNPRMWASPAVQENVRKLKERGHFVMEPGVGRMARAEEGEGSGRMPEPEAILAEVLR
type: DOMAIN
name: Flavoprotein
description: Flavoprotein

phrase: LAGMRLVVSAGPTRERWDAVRYLTNRSSGKMGYALAAAAAARGAEVTLVSGPAGLPGPPGLRTMRVESAAEMREAVLAAWKDAHAGIMAAAVSDYRPARATVHKQKKKEGPLTLTLERTADILAEMGKKKGKRLLVGFAAETGDLTKNAKDKLRRKGLDLIVANRVAGEEDAMGADSATAVL
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal
Protein sequence:
MTSVDRTFGKYLEEIMANIKLFALNGNYPLAEKVAASLNMELSPASVKHFADGEIQIDIDKSIRGADVYVIQSVSDPVNENFMELMIMVDALRRASAHLINVVIPYYGYARADRKARAREPITAKMIANMIEMDGVNRVITVDLHADQVQGFFDIPVDHLRALPLIAHYFIDNKITDNVVAIAPDHSGTKLARKLAEHLGAPLAIVDARPGEQNVGVIGDVAGKTAIIVDDMIDTATRIEESVIALQEAGAKDIYAIATHAVLSAGAATRLSKLPLQKIVVTDTINIPEEKCLPNMVQLSVGELIGNAIDRISKNESIHDLFED

Annotated regions:
phrase: DLHADQVQGFFDIPV
type: CONSERVED_SITE
name: PRib_PP_synth_CS
description: Phosphoribosyl pyrophosphate synthetase, conserved site

phrase: IKLFALNGNYPLAEKVAASLNMELSPASVKHFADGEIQIDIDKSIRGADVYVIQSVSDPVNENFMELMIMVDALRRASAHLINVVIPYYGYARADRKARAREPITAKMIANMIEMD
type: DOMAIN
name: Pribosyltran_N
description: Ribose-phosphate pyrophosphokinase, N-terminal domain

phrase: ALPLIAHYFIDNKITDNVVAIAPDHSGTKLARKLAEHLGAPLAIVDARPGEQNVGVIGDVAGKTAIIVDDMIDTATRIEESVIALQEAGAKDIYAIATHAVLSAGAATRLSKLPLQKIVVTD
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain
Protein sequence:
MTFENTLAYARERDAQDPLRAFRDEFIFPQHDGRDAIYFTGNSLGLQPKAAAAALKQELDDWGRLGVEGHFHAKHPWYSYHEELAASTARLVGALEEEVVVMNQLTSNLHFLLVSFYRPKGKRVKILTEQRPFPSDTYAFASQIRFHGLDPDVCLEEVQPRPGEHTLRQEDIIAKINELGDELALVCFGGVNFLTGQAFDIKGITTAAHKVCAFAGFDLAHGAGNLHLKLHDDGADFACWCSYKYLNSGPGGVAGAFVHQRHLGTELPRFAGWWGHDKRERFKMERAFKPMLTAEAWQVSNAPVLPMAVHRVALEQFDRAGMERLRAKSIHLTGYLRWIIEGISAEHGNMFNIITPKDPAQNGAQLSILVNGDGRGIFDRLTARGVFCDWREPDVLRMAPVPMYNSFEDVYRFGEILNECVRK

Annotated regions: