nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MVKGTSSKPGKVRKREVYDAPLHIRSKKIVAPLSAELQQKLGIKRIRVRKGDRVLIVRGSFKGHEGKVTSVDVKKGRIHVEGATLRKADGTEVPFPIHPSKVVVTELDLSDPRRKELVERKKQVVVSGQEG

Annotated regions:
phrase: GDRVLIVRGSFKGHEGKVTSVDVKKGRIHVEGATLRKADGTEVPFPIHPSKVV
type: DOMAIN
name: Ribosomal_uL24_KOW
description: Large ribosomal subunit protein uL24, KOW domain

phrase: RVRKGDRVLIVRGSFKGHEGKVTSVDV
type: DOMAIN
name: KOW
description: KOW

phrase: KGDRVLIVRGSFKGHEGKVTSVDVKKGRIHV
type: DOMAIN
name: KOW
description: KOW

phrase: GDRVLIVRGSFKGHEGK
type: CONSERVED_SITE
name: Ribosomal_uL24_CS
description: Large ribosomal subunit protein uL24, conserved site
Protein sequence:
MFDFMTLEKVWEKGPLVHNITNIVVANDSANGLLAIGASPIMGSAKEEMDELAKMADVLVINIGTLDGELVTAMKIAGRAANVAGTPVVLDPVGVGATSYRRKVVQELLAEIQFTAIRGNAGELAAIAGEAWEAKGVDAGVGSADVLSIAEKVANEWSTVVIISGEVDVISDGTRFAKVANGSALLPRITGSGCLLSAVCGSFMAVQDDAFRASVEACASYAVASEYAEIELERKLPGSFRPQFLDALASWSVEKTRAKAKIQESGEHK

Annotated regions:
Protein sequence:
MRRYFIYLGYNGKNFRGWQIQPNGMTVQQSIEEALAILMRTPVPIVGAGRTDAGVHAHLMIAHFDWEEPIGDLVFLAEKLNRLLPKDIAVYKIVPVVPEAHARFDATSRTYKYYVTTKKDPFNHELVYKLPGRLDFEAMNEACKVLFDYIDFTSFSKLHTDVKTNNCHIQHAGWTQEGDIWVFTIRADRFLRNMVRAIVGTLLEVGRGRLTIDGFRNVIEAKDRCKAGTSVPGHALFLVDVTYPEELFPVED

Annotated regions:
phrase: YIDFTSFSKLHTDVKTNNCHIQHAGWTQEGDIWVFTIRADRFLRNMVRAIVGTLLEVGRGRLTIDGFRNVIEAKDRCKAGTSVPGHALFLVDVTY
type: DOMAIN
name: PsdUridine_synth_TruA_a/b_dom
description: Pseudouridine synthase I, TruA, alpha/beta domain

phrase: YNGKNFRGWQIQPNGMTVQQSIEEALAILMRTPVPIVGAGRTDAGVHAHLMIAHFDWEEPIGDLVFLAEKLNRLLPKDIAVYKIVPVVPEAHARF
type: DOMAIN
name: PsdUridine_synth_TruA_a/b_dom
description: Pseudouridine synthase I, TruA, alpha/beta domain
Protein sequence:
MSAVLDTPVAIRRTAMDLLARREHGRVELTRKLRQRGASDELIEPELDRLAEEGLLSEARYLESFIRYRSGSGYGPARIREELGQRGLARADIEQALRESEVDWAERMRDVWQRKFAGQRPQDRAAVPSRPDFSLTGASPWI

Annotated regions:
phrase: RTAMDLLARREHGRVELTRKLRQRGASDELIEPELDR
type: DOMAIN
name: RecX_HTH_1st
description: RecX, first three-helical domain

phrase: SEARYLESFIRYRSGSGYGPARIREELGQRGLARADIEQA
type: DOMAIN
name: RecX_HTH_2nd
description: RecX, second three-helical domain
Protein sequence:
MASTDQNHIENNRQHTDASEQSNTTHFGYKTIDKDEKVSMVAGVFHSVAKQYDVMNDLMSFGIHRLWKRFTIDASGVRPGNKVLDLAGGTGDLTAKFSQLVGKDGKVILADINSSMLNVGRDKLRDRGLVQNIEYVQANAEYLPFEENTFDIVTIAFGLRNVTDKDKALRSIYSVLKPGGRLLVLEFSKPEHEILNKAYDFYSFNILPKMGELVAKDGDSYQYLAESIRMHPDQDTLEEMMKNAGFEQTSYKNLTGGIVALHKGYKF

Annotated regions:
phrase: YDVMNDLMSFGIHRL
type: CONSERVED_SITE
name: UbiE/COQ5_MeTrFase_CS
description: UbiE/COQ5 methyltransferase, conserved site
Protein sequence:
MLLKEYRICMPLTVDEYKIGQLYMISKHSHEQSDRGEGVEVVQNEPFEDPHHGNGQFTEKRVYLNSKLPSWARAVVPKIFYVTEKAWNYYPYTITEYTCSFLPKFSIHIETKYEDNKGSNDTIFDNEAKDVEREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSHQPIMCSYKLVTVKFEVWGLQTRVEQFVHKVVRDILLIGHRQAFAWVDEWYDMTMDEVREFERATQEATNKKIGIFPPAISISSIPLLPSSVRSAPSSAPSTPLSTDAPEFLSVPKDRPRKKSAPETLTLPDPEKKATLNLPGMHSSDKPCRPKSE

Annotated regions:
phrase: MLLKEYRICMPLTVDEYKIGQLYMISKHSHEQSDRGEGVEVVQNEPFEDPHHGNGQFTEKRVYLNSKLPSWARAVVPKIFYVTEKAWNYYPYTITEYTCSFLPKFSIHIETKYEDNKGSNDTIFDNEAKDVEREVCFIDIACDEIPERYYKESEDPKHFKSEKTGRGQLREGWRDSHQPIMCSYKLVTVKFEVWGLQTRVEQFVHKVVRDILLIGHRQAFAWVDEWYDMTMDEVREFERATQ
type: DOMAIN
name: PI_transfer_N
description: Phosphatidylinositol transfer protein, N-terminal
Protein sequence:
MPEPVKVLVTGAAGQIAYSLLYGIAKGDVFGKDQPLILVLLDITPMMTVLEGVVMELQDCALPLLKEVIATDKEDVAFKDLDVAILVGSMPRREGMERKDLLKANVKIFKSQGAALNKYSKKSVKVIVVGNPANTNCLTAMKSAPSIPKENFSCLTRLDHNRAKGQIALKLNVASDDVKNVIIWGNHSSTQYPDASHATVNLQGKDVGAFEAVKNDDWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPDGQFVSMGVISDGNSYGIPEDLMYSFPLTIKNKTWKIVEGLPINDFSREKMDLTAKELHEEKETALEFLSCE

Annotated regions:
phrase: VKVLVTGAAGQIAYSLLYGIAKGDVFGKDQPLILVLLDITPMMTVLEGVVMELQDCALPLLKEVIATDKEDVAFKDLDVAILVGSMPRREGMERKDLLKANVKIFKSQGAALNKYSKKSVKVIVVGNPANTNCLTAMKSAPSIPKEN
type: DOMAIN
name: Lactate/malate_DH_N
description: Lactate/malate dehydrogenase, N-terminal

phrase: TRLDHNRAKGQIALKLNVASDDVKNVIIWGNHSSTQYPDASHATVNLQGKDVGAFEAVKNDDWLKGEFITTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPDGQFVSMGVISDGNSYGIPEDLMYSFPLTIKNKTWKIVEGLPINDFSREKMDLTAKELHEEKETALE
type: DOMAIN
name: Lactate/malate_DH_C
description: Lactate/malate dehydrogenase, C-terminal

phrase: LTRLDHNRAKGQ
type: ACTIVE_SITE
name: Malate_DH_AS
description: Malate dehydrogenase, active site
Protein sequence:
MNTRLEKFYKENVVPALMKEFGYTNPMEVPKLVKVTLNMGVGEAATNKKILENAVADMSKISGQKPVVTKSRVSVASFKIRDGWPIGCKTTLRRAKMYEFLDRLINISLPRVRDFRGVSGRSFDGRGNFNMGVKEQIIFPEIDFDAVDAIRGMDIAITTTAKTDAEAKALLAAFKFPFRN

Annotated regions:
phrase: MSKISGQKPVVTKSRV
type: CONSERVED_SITE
name: Ribosomal_uL5_CS
description: Large ribosomal subunit protein uL5, conserved site

phrase: NPMEVPKLVKVTLNMGVGEAATNKKILENAVADMSKISGQKPVVTKSRVSVASFKI
type: DOMAIN
name: Ribosomal_uL5_N
description: Large ribosomal subunit protein uL5, N-terminal

phrase: PIGCKTTLRRAKMYEFLDRLINISLPRVRDFRGVSGRSFDGRGNFNMGVKEQIIFPEIDFDAVDAIRGMDIAITTTAKTDAEAKALLAAFKFP
type: DOMAIN
name: Ribosomal_uL5_C
description: Large ribosomal subunit protein uL5, C-terminal
Protein sequence:
MFVSTAFAQTATESQPASTAGEHGAADAVHTETGVAHDAGHGSGVFPPFDSTHYASQVLWLAITFGLFYLFLSRVVLPRIGGVIETRRDRIAQDLEQAARLKQDADNAIAAYEQELAQARSKAASIAEAAREKGKGEADAERASAEAVLESKLKEAEERIAAIKAKAMSDVGNIAEETMATIVEQLLGLTADKASVSEAVKAIRASNA

Annotated regions:
Protein sequence:
MKQNIKRNWIWILIVMIVIGIILYFSIRNLFSTKVAEWSISELLNNIERAKENTTDALYFKEITVNPFTNSITGVFNNTDNTSTSFVTYTNLDLLRLSGVASDQGVISKIFTPEVFLTANNVSGSLKSVATPQPNPFLGILISSVPVLILIFVMVWIYRSQVKMMNGQGGAFGGDKGTAQIIKSDKKFTDIAGNKEPIEEISEVVDYLKNPGKYQQSGARMPHGILLGGPPGTGKTLLAKATAGEANVPFYFVSASSFVELFVGMGAKRVRQVISEARKNSPAIIFIDELDAIGRTRGSGIGGGHDEREQTLNQLLVEMDGMKENSGLLFIAATNRTDVLDPALIRPGRFDRIITVGLPDVKEREEILKLHAKGKRFESNVDFANIAKRTPGFSGAQLENVINEAVLLSIREDTKVINLYQIDEAIDRVMSGPAKKSRTITKEELTMVAYHEAGHAVVGIKVPGGNKVQKITIIPRGNAGGYNLMMPENEKYNYSKADLYATIASFMGGRAAEEIIYGDNKISTGAADDIKKATSIARRMVTQFGMSDLGPIEYQSDEGSPFLGKALASNSSLSNQVNHEIELEIRKIIFTAKEQATKIIKQNIELLELIKESLLKKETIVGEEIEYIAKHMKLPPEKIEEKDLSKNSEDNNLDSLIEKTSKKE

Annotated regions:
phrase: ILLGGPPGTGKTLLAKATAGEANVPFYFVSASSFVELFVGMGAKRVRQVISEARKNSPAIIFIDELDAIGRTRGSGIGGGHDEREQTLNQLLVEMDGMKENSGLLFIAATNRTDVLDPALIRPGRFDRIITV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: MPHGILLGGPPGTGKTLLAKATAGEANVPFYFVSASSFVELFVGMGAKRVRQVISEARKNSPAIIFIDELDAIGRTRGSGIGGGHDEREQTLNQLLVEMDGMKENSGLLFIAATNRTDVLDPALIRPGRFDRIITVGLP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: NVDFANIAKRTPGFSGAQLENVINEAVLLSIREDTKVI
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: TITKEELTMVAYHEAGHAVVGIKVPGGNKVQKITIIPRGNAGGYNLMMPENEKYNYSKADLYATIASFMGGRAAEEIIYGDNKISTGAADDIKKATSIARRMVTQFGMSDLGPIEYQSDEGSPFLGKALASNSSLSNQVNHEIELEIRKIIFTAKEQATKIIKQNIELLELIKESLLKKETIVGEEIE
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41
Protein sequence:
MTKTPAKKKRARSSKAKGTDANAALEARIGHSFADPNLLMQGITHVSALKSGRKRGDSYQRLEFLGDHVLGLVVSDMLYHAFPNADEGELSKRLAELVRKESCADVAKSLGLLDDIKLGSVGPSADARLRKSVLGDICEAVIGAIFLDGGHAAAAEFVKRNWTERMHKPRRPLRDPKTVLQEWAQGKGLPTPVYREVERTGPHHDPQFRVAVDLPGLAPAEGIGGSKRAAEKVAASVMIEREGVGGGNDG

Annotated regions:
phrase: QRLEFLGD
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: NAALEARIGHSFADPNLLMQGITHVSALKSGRKRGDSYQRLEFLGDHVLGLVVSDMLYHAFPNADEGELSKRLAELVRKESCADVAKSLGLLDDIKLGSVGPSADARLRKSVLGDICEAVIGAIFLDG
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: NLLMQGITHVSALKSGRKRGDSYQRLEFLGDHVLGLVVSDMLYHAFPNADEGELSKRLAELVRKESCADVAKSLGLLDDIKLGSVGPSADARLRKSVLGDICEAVIGAIFLDGGHAAAAEFVKRNWTERMHKPRR
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: PKTVLQEWAQGKGLPTPVYREVERTGPHHDPQFRVAVDLPGLAPAEGIGGSKRAAEKVAASVMIERE
type: DOMAIN
name: dsRBD_dom
description: Double-stranded RNA-binding domain

phrase: DPKTVLQEWAQGKGLPTPVYREVERTGPHHDPQFRVAVDLPGLAPAEGIGGSKRAAEKVAASVMIEREG
type: DOMAIN
name: dsRBD_dom
description: Double-stranded RNA-binding domain

phrase: LLMQGITHVSALKSGRKRGDSYQRLEFLGDHVLGLVVSDMLYHAFPNADEGELSKRLAELVRKESCADVAKSLGLLDDIKLGSVGPSADARLRKSVLGDICEAVIGAIFLDGGHAAAAEFVKRN
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: PKTVLQEWAQGKGLPTPVYREVERTGPHHDPQFRVAVDLPGLAPAEGIGGSKRAAEKVAASVMI
type: DOMAIN
name: dsRBD_dom
description: Double-stranded RNA-binding domain

phrase: DPNLLMQGITHVSALKSGRKRGDSYQRLEFLGDHVLGLVVSDMLYHAFPNADEGELSKRLAELVRKESCADVAKSLGLLDDIKLGSVGPSADARLRKSVLGDICEAVIGAIFLDGGHAAAAEFVKRN
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain
Protein sequence:
MASSIFRDLPAEHPRHLIPALCAQFYNLGWVTGTGGGMSIKYNNEIYIAPSGVQKERMQPEDLFVQDIDGKDLQLPPEIKGLKKSQCTPLFMLAYRHRNAAAVIHTHSQHAVMATLLWPGKTFRCTHLEMIKGVYDEADKRYLRYDEQLVVPIIENTPHERDLADSMYAAMMEYPGCSAVLVRRHGVYVWGQTWEKTKTMSECYDYLFSIAVQMKTAGLNPEKFENA

Annotated regions:
phrase: HLIPALCAQFYNLGWVTGTGGGMSIKYNNEIYIAPSGVQKERMQPEDLFVQDIDGKDLQLPPEIKGLKKSQCTPLFMLAYRHRNAAAVIHTHSQHAVMATLLWPGKTFRCTHLEMIKGVYDEADKRYLRYDEQLVVPIIENTPHERDLADSMYAAMMEYPGCSAVLVRRHGVYVWGQTWEKTKTMSECYDYLFSIA
type: DOMAIN
name: Aldolase_II/adducin_N
description: Class II aldolase/adducin N-terminal

phrase: IPALCAQFYNLGWVTGTGGGMSIKYNNEIYIAPSGVQKERMQPEDLFVQDIDGKDLQLPPEIKGLKKSQCTPLFMLAYRHRNAAAVIHTHSQHAVMATLLWPGKTFRCTHLEMIKGVYDEADKRYLRYDEQLVVPIIENTPHERDLADSMYAAMMEYPGCSAVLVRRHGVYVWGQTWEKTKTMSECYDYLFSI
type: DOMAIN
name: Aldolase_II/adducin_N
description: Class II aldolase/adducin N-terminal
Protein sequence:
MKLHELKPAEGSRKVRNRVGRGIGSGNGKTAGKGHKGQNARSGGGVRLGFEGGQTPLFRRLPKRGFTNINRKEFAIVNLSTLNRFEDGTEVTPELLLETGVISKLNDGVKVLASGAVEKKLTVKAHKFSSSAKEAIEAAGGSVEVI

Annotated regions:
phrase: KVLASGAVEKKLTVKAHKFSSSAKEAIEAA
type: CONSERVED_SITE
name: Ribosomal_uL15_CS
description: Large ribosomal subunit protein uL15, conserved site

phrase: IVNLSTLNRFEDGTEVTPELLLETGVISKLNDGVKVLASGAVEKKLTVKAHKFSSSAKEAIEAAGGSV
type: DOMAIN
name: Ribosomal_uL15/eL18
description: Large ribosomal subunit protein uL15/eL18
Protein sequence:
MSTGAFYISSLLEKMTSSDKDFRFMATSDLMSELQKDSIQLDEDSERKVVRTLLRLLEDRSGEVQNLAVKCLGPLVGKVKEYQVENIVDTLCANMRSDKEQLRDIAGIGLKTVLSELPPAATGSGLAINVCRKITGQLTSAIAQQEDVAVQLEALDILSDMLSRLGAPLGTFHASLLHCLLPQLSSPRLAVRKRTVVALGHLAAACSTDLFVELADHLVDRLPGPRAPASPAAIRTLIQCLGSVGRQAGHRLGAHLDRLVPMVEEFCNLDDDELRESCLQAFEAFLRKCPKEMDPHVPNVTSLCLQYMKHDPNYDHDSDDEEQMETEDSEFSEQESEDEYSDDDDMSWKVRRAAAKCMAALISSRPDLLPDFHCTLAPALIRRFKEREENVKADIFGAYIMLLRHTRPPKGWLEAVEEPTQTGRNLNMLRAQVPLVIKALQRQLKDRNVRTRQGCFNLFTELAGVLPGSLAEHMAVLVSGIVFSLADYSSSSTIRMDALAFLQGLLGTEPAEAFHPHLPTLLPPVMACVADPFYKVAAEALLVLQELVRTLWPLDRPRLLDPEPYVGEMSTATLARLRATDLDQEVKERAISCVGHLVGHLGDRLGDDLEPTLMLLLDRLRNEITRLPAVKALTLVAMSPLRLDLQPILAEALPILASFLRKNQRALRLATLAALDALAQSQGLGLPPPAVRTVLTELPALVSENDMHVAQLAVDFLTTVTQTQPSSLVEVSGPVLGELLQLLHSPLLPAGVLAATEGFLQALVGTRPPCVEYSELISLLTAPVYNQVGDGGPGLHKQVFHSLARCVAALSAACPQEAAGTASRLVCDAKSPHSSTGVKVLAFLSLAEVGQVAGPGPQRELKTVLLEALGSPSEDVRAAAAYALGRVGAGNLPDFLPFLLAQIEAQPRRQYLLLHALREALGAAQPDNLKPYVEDVWALLFQRCESPEEGTRCVVAECIGKLVFVNPPYLLPRFRKQLAAGQPYTRSTVITAVKFLISDQPHSIDPLLKSFIAEFMESLQDPDLNVRRATLTFFNSAVHNKPSLVRDLLDDILPLLYQETKIRRDLIREVEMGPFKHTVDDGLDVRKAAFECMYSLLESCLGQLDMCEFLNHVEDGLKDHYDIRMLTFIMLARLATLCPAPVLQRVDRLIEPLRATCTAKVKAGSVKQELEKQEELKRSAMRAVAALLTNPEVRKSPTVADFSAQIRSNPELTTLFESIQKDTASGPSTDSMELS

Annotated regions:
phrase: LVRDLLDDILPLLYQETKIRRDLIREVEMGPFKHTVDDGLDVRKAAFECMYSLLESCLGQLDMCEFLNHVEDGLKDHYDIRMLTFIMLARLATLCPAPVLQRVDRLIEPLRATCTAKVKAGSVKQELEKQEELKRSAMRAVAALLTNPEVRKSPTVADFSAQ
type: DOMAIN
name: TATA-bd_TIP120
description: TATA-binding protein interacting (TIP20)

phrase: VLLEALGSPSEDVRAAAAYALGR
type: REPEAT
name: HEAT
description: HEAT repeat
Protein sequence:
MDWKLEGSAQKTESRVLQEHEITLDDPGEDGVSESFQLLQIDVGCEHWEQETLPTGSAAWCSKNVQRKQRHWEKIVAAKKSKRKQEKERRKANRVENSGIYPQHSKRFLRSLIKERLLEAKHSGPRLCIDLSMTNHMSKKELSRLAGQIRRLYGSNKKADRPFWIYLTGFTTDSPLYEECLRMNDGFSSYLLDRTEEDCFSLFPLETLVYLTPDSDHALENVDLNKVYILGGLVDESIQKKVTFQKAQEHSVKTARLPIQEYMVKCQNGKNYHSEILTINQVFDILSTYFETQNWPEALKKGVSSRKGYVLRNSVE

Annotated regions:
phrase: IKERLLEAKHSGPRLCIDLSMTNHMSKKELSRLAGQIRRLYGSNKKADRPFWIYLTGFTTDSPLYEECLRMNDGFSSYLLDRTEEDCFSLFPLETLVYLTPDSDHALENVDLNKVYILGGLVDESIQKKVTFQKAQEHSVKTARLPIQEYMVKCQNGKNYHSEILTINQVFDILSTYFETQNWPEALKKGVSSRKGY
type: DOMAIN
name: MT_TRM10-typ
description: tRNA methyltransferase TRM10-type domain

phrase: PRLCIDLSMTNHMSKKELSRLAGQIRRLYGSNKKADRPFWIYLTGFTTDSPLYEECLRMNDGFSSYLLDRTEEDCFSLFPLETLVYLTPDSDHALENVDLNKVYILGGLVDESIQKKVTFQKAQEHSVKTARLPIQEYMVKCQNGKNYHSEILTINQVFDILSTYFETQNWPEALKKGVSSR
type: DOMAIN
name: Trm10_B_MTase_dom
description: tRNA methyltransferase 10 homolog B, TRM10-type domain

phrase: NHMSKKELSRLAGQIRRLYGSNKKADRPFWIYLTGFTTDSPLYEECLRMNDGFSSYLLDRTEEDCFSLFPLETLVYLTPDSDHALENVDLNKVYILGGLVDESIQKKVTFQKAQEHSVKTARLPIQEYMVKCQNGKNYHSEILTINQVFDILSTYFETQNWPEALKKGVSSR
type: DOMAIN
name: tRNA_MeTrfase_TRMD/TRM10
description: tRNA methyltransferase TRMD/TRM10-type domain
Protein sequence:
MAKKSKVARNAQRKALVAKYAKRRAALKARIRDRTLSYEERRAAQDALASLPRDSNPNRVTNRCALTGRPRGNLRRFGLSRIAFREKALRGEIPGVIKSSW

Annotated regions:
phrase: RCALTGRPRGNLRRFGLSRIAF
type: CONSERVED_SITE
name: Ribosomal_uS14_CS
description: Small ribosomal subunit protein uS14, conserved site
Protein sequence:
MRPAQTNQFDYVKIGLASPERIRQWGERTLPNGQVVGEVTKPETINYRTLKPEMDGLFCERIFGPKDWECHCGKYKESVIEVLSVSAVVLEVTESRVRRHRMGYIKLAAPVAHVGYSKAFLAIFHSVGYALRDVEQIVYFNSYVVLSPGNAETLTYKQLLSEDQWLEIEDQIYSEDSLLQGVEVGIGAEALLRLLADINLEQEAESLREEIGNAKGQKRAKLIKRLRVIDNFIATGSKPEWMVMAVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRSVIVVGPKLKIHQCGLPREMAIELFQPFVINRLIRSGMVIHQAAPMISRNDPSVWDVLEEVIEGHPVMLNRAPTLHRLGIQSFEPILVEGRAIQLHPLVCPAFNADFDGDQMAVHVPLSLESQAEARLLMLASNNILSPATGKPIITPSQDMVLGAYYLTAENPGATKGAGKYFSSLEDVIMAFQQEQIDLHAYIYVRFDGEIESDQPDTEPVKVTENEDGTRTLLYKFRRVRQDAKGNVLSQYIYTTPGRVIYNNAIQEALAS

Annotated regions:
phrase: GKRVDYSGRSVIVVGPKLKIHQCGLPREMAIELFQPFVINRLIR
type: DOMAIN
name: RNA_pol_asu
description: RNA polymerase, alpha subunit

phrase: DVLEEVIEGHPVMLNRAPTLHRLGIQSFEPILVEGRAIQLHPLVCPAFNADFDGDQMAVHVPLSLESQAEARLLM
type: DOMAIN
name: RNA_pol_asu
description: RNA polymerase, alpha subunit

phrase: EWMVMAVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRSVIVVGPKLKIHQCGLPREMAIELFQPFVINRLIRSGMVIHQAAPMISRNDPSVWDVLEEVIEGHPVMLNRAPTLHRLGIQSFEPILVEGRAIQLHPLVCPAFNADFDGDQMAVHVPLSLESQAEARLLMLASNNILSPATGKPIITPSQDMVLGAYYL
type: DOMAIN
name: RNA_pol_N
description: RNA polymerase, N-terminal

phrase: NILSPATGKPIITPSQDMVLGAYYLTAENPGATKGAGKYFSSLEDVIMAFQQEQIDLHAYIYVRFD
type: DOMAIN
name: RNA_pol_Rpb1_3
description: RNA polymerase Rpb1, domain 3

phrase: NQFDYVKIGLASPERIRQWGERTLPNGQVVGEVTKPETINYRTLKPEMDGLFCERIFGPKDWECHCGKYKESVIEVLSVSAVVLEVTESRVRRHRMGYIKLAAPVAHVGYSKAFLAIFHSVGYALRDVEQIVYFNSYVVLSPGNAETLTYKQLLSEDQWLEIEDQIYSEDSLLQGVEVGIGAEALLRLLADINLEQEAESLREEIGNAKGQKRAKLIKRLRVIDNFIATGSKPEWMVMAVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVRNEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQN
type: DOMAIN
name: RNA_pol_Rpb1_1
description: RNA polymerase Rpb1, domain 1
Protein sequence:
MKSYELITILGPTASGKTTFAAALAAQLDTEIISADSRQIYRSMDIGTGKDLADYNVNGKQIPYHLIDICEPGYKYNVFEYQHDFFRVYEDMKRRGKLPILCGGTGMYIEAVLKGYKLLDVPQNPELRESLRNKTLEELETILASYKILHNKTDVDTAQRAIRAIEIEEYYKTQAPDVNEYNPINSLIIGIHIDRELRREKISRRLRTRLDEGMVDEVRTILATGVKPEDLIYYGLEYKFLTLYIIGELSFEEMVSQLEIAIHQFAKRQMTWFRGMERRGCEIHWIDATLPTEEKIATTMRILNNQL

Annotated regions:
Protein sequence:
MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRTVKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR

Annotated regions:
phrase: NRLVNMLVNRILKHGKKSLAYQIIYR
type: CONSERVED_SITE
name: Ribosomal_uS7_CS
description: Small ribosomal subunit protein uS7, conserved site

phrase: SRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRTVKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEAN
type: DOMAIN
name: Ribosomal_uS7_dom
description: Small ribosomal subunit protein uS7 domain
Protein sequence:
MARLALSPVPSHWMVALLLLLSAEPVPAARSEDRYRNPKGSACSRIWQSPRFIARKRGFTVKMHCYMNSASGNVSWLWKQEMDENPQQLKLEKGRMEESQNESLATLTIQGIRFEDNGIYFCQQKCNNTSEVYQGCGTELRVMGFSTLAQLKQRNTLKDGIIMIQTLLIILFIIVPIFLLLDKDDSKAGMEEDHTYEGLDIDQTATYEDIVTLRTGEVKWSVGEHPGQE

Annotated regions:
phrase: DHTYEGLDIDQTATYEDIVT
type: REPEAT
name: Phos_immunorcpt_sig_ITAM
description: Phosphorylated immunoreceptor signalling ITAM

phrase: DSKAGMEEDHTYEGLDIDQTATYEDIVT
type: REPEAT
name: Phos_immunorcpt_sig_ITAM
description: Phosphorylated immunoreceptor signalling ITAM

phrase: PKGSACSRIWQSPRFIARKRGFTVKMHCYMNSASGNVSWLWKQEMDENPQQLKLEKGRMEESQNESLATLTIQGIRFEDNGIYFC
type: DOMAIN
name: Ig-like_dom
description: Immunoglobulin-like domain

phrase: PRFIARKRGFTVKMHCYMNSASGNVSWLWKQEMDENPQQLKLEKGRMEESQNESLATLTIQGIRFEDNGIYFCQQKCNNTSEVYQGCGTELRV
type: DOMAIN
name: Ig_sub
description: Immunoglobulin domain subtype

phrase: SPRFIARKRGFTVKMHCYMNSASGNVSWLWKQEMDENPQQLKLEKGRMEESQNESLATLTIQGIRFEDNGIYFCQQKCNNTSEVYQGCGTELR
type: DOMAIN
name: Ig_V-set
description: Immunoglobulin V-set domain
Protein sequence:
MKDSLVLKTIQEKIKNLGSLPGCYLWKNELGQVIYVGKALKLQSRVRSYLNPNQKDRKTRALFVELYDLDWIATGTEKEALLLEATLIKKYNPKFNVRLKDDKKYPFLCVSTSEDYPMVFLTRKVKDNGDRYFGPFTDVKAARDTLELIHRIFPIRKTKLKLPLPKPQRPCLNFHMGRCLGPCQGNVTKDTYSELVDEILRFLEGKKERLVADLKKAMMDASSKMEYERAGFLKQRIEKINQLREKQTVVSMDGGDEDILGISKREDEGQILILEVRGGRLEGKKSFPLTGLSFSDDEEAFTSFLRDYYLNVTVLPSVVYLPTSAKGNYDVFLEAILEKFGTSIKLKFPEMGPKKSLLRLAEKNADLSLTERILATKLRDQTVAMKELQEKLNLPTLPRTIECYDISHFQGSLPVASGVMFVEGKPYKPGYRHYKMRGYEGINDPGMIHEVIARRLSHLVNEEEPLPDLIVIDGGLTQLSRAAEAANALDLGHIPMVGLAKKREEIYFPGEKHPYSFDQHSPMMRLLRNLRDEAHRFGVTFQRLQRKKKALKSILDDIPDIGASRRKSILMYFQAKKKVTDATRQELEKVQGIGPVLAEKIFTNIQNLKKIEPK

Annotated regions:
phrase: SLPGCYLWKNELGQVIYVGKALKLQSRVRSYLNPNQKDRKTRALFVELYDLDWIATGTEKEALLLEATLIKKYNPKFN
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: SILDDIPDIGASRRKSILM
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: QELEKVQGIGPVLAEKIFT
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: GCYLWKNELGQVIYVGKALKLQSRVRSYLNPNQKDRKTRALFVELYDLDWIATGTEKEALLLEATLIKKYNPKF
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: LPGCYLWKNELGQVIYVGKALKLQSRVRSYLNPNQKDRKTRALFVELYDLDWIATGTEKEALLLEATLIKKYNPKFNVRLK
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: ILILEVRGGRLEGKKSFPLTGLSFSDDEEAFTSFLRDYYLNVTVLPSVVYLPTSAKGNYDVFLEAILEKFGTSIKLKFPEMGPKKSLLRLAEKNADLSLTERILATKLRDQTVAMKELQEKLNLPTLPRTIECYDISHFQGSLPVASGVMFVEGKPYKPGYRHYKMRGYEGINDPGMIHEVIARRLSHLVNEEEPLPDLIVIDGGLTQLSR
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: ERLVADLKKAMMDASSKMEYERAGFLKQRIEKINQ
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: ERLVADLKKAMMDASSKMEYERAGFLKQRIEKIN
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: QEKLNLPTLPRTIECYDISHFQGSLPVASGVMFVEGKPYKPGYRHYKMRGYEGINDPGMIHEVIARRLSHLVNEEEPLPDLIVIDGGLTQLSRAAEAANALDLGHIPMVGLAKKREEIYFPGEKHPYSFDQHSPMMRLLRNLRDEAHRFG
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: PGCYLWKNELGQVIYVGKALKLQSRVRSYLNPNQKDRKTRALFVELYDLDWIATGTEKEALLLEATLIKKYNPKFN
type: DOMAIN
name: GIY-YIG_UvrC_Cho
description: UvrC/Cho-like, GIY-YIG domain
Protein sequence:
MAEKRNIFLVGPMGAGKSTIGRHLAQQLHMEFLDSDTVIEERTGADIAWVFDVEGEEGFRIREEGVINDLTQEQGIVLATGGGSVISKESRNRLSARGVVVYLETTIEKQLARTQRDKKRPLLQTDEPREVLEALAKERNALYEEVSDYVVRTDDQSAKVVANQIIQMLEER

Annotated regions:
phrase: RIREEGVINDLTQEQGIVLATGGGS
type: CONSERVED_SITE
name: Shikimate_kinase_CS
description: Shikimate kinase, conserved site
Protein sequence:
MVDILIKNGHVLTMDPDSGDLKKGEVAIENGRIVYVGLSYNGKADKIIDASGSVVMPGLVNTHNHAGMTLLRGYADDLPLAEWLEDYIWPVEEKLGPEEIYAGVRLACLEMIKSGTTTFADMYIHEQAAARAVEDCGMRAALSYGMIDFGDPQRAASSLLKGRNFVKDFNGAANGRISAMYGPHAPHTCSQQFLRDVRKQARKDGVKVHIHVLETEAELNQMKEKYGKCSVNMLHDIGFFDSDVLAAHCIWLSEGDMDILAEMGVHVSHDPVSNMKMAAGIAPVPKLLEKGVNVSLSTDGCASNNNLDMFGVMKMAALLHKVDSMDLTVIDARKVLEMATVNGAKALGIEAGMIKEGYYADLIVVDMKRPHLTPLYDIDSHLVYSALGSDVTTVLVDGKVLMENGQVLCMNEYEIMVEASKAAKKTDSQHLIDVLGLQDYSDDQ

Annotated regions:
phrase: VVMPGLVNTHNHAGMTLLRGYADDLPLAEWLEDYIWPVEEKLGPEEIYAGVRLACLEMIKSGTTTFADMYIHEQAAARAVEDCGMRAALSYGMIDFGDPQRAASSLLKGRNFVKDFNGAANGRISAMYGPHAPHTCSQQFLRDVRKQARKDGVKVHIHVLETEAELNQMKEKYGKCSVNMLHDIGFFDSDVLAAHCIWLSEGDMDILAEMGVHVSHDPVSNMKMAAGIAPVPKLLEKGVNVSLSTDGCASNNNLDMFGVMKMAALLHKVDSMDLTVIDARKVLEMATVNGAKALGIEAGMIKEGYYADLIVVDMKRPHLTPLYDIDSHLVYSALGSDVTTVLVDGK
type: DOMAIN
name: Amidohydro-rel
description: Amidohydrolase-related
Protein sequence:
MALSFFSGGGSASHAKYFDIRLDEDYIVFRGGEQEAASAHLSGKLLLCLSEPLSIKHIRLHLTGISRVCWHLPSSSAGGGRKSWRERVIYEKTWRFRDPGKGKTEILPAGNYEYPFNLVLEGNMPESIEGLSDTYITYRFKAEIGRKYAKDIIVRKPLRIIRTLEPSALELAHAMSVENIWPNKIEYSISTPTKAVIFGTSIRVDFKLIPLLKGLTIGQIVSQLIESHDLTLNPEDPDSIRNTYKNTRTILNDEFELDHDNALEIIDEAAEGYQFSRYLDLPKTLTRCLQDTDTKGIKVRHKLKFRVQLMNPDGHISELRATLPVSIFISPNLAIDENNNLVDQTPQSAQRAINDIAQQAPPLYGEHQFDQLYSELDPNGYRTPGPGSGPGTPFGTLSRNLSAENLASMNALTNTDISASALHSRLSNLSNLNITRPHQPSPTDHESQNDSEHRRLGVPADYFGPSSGSNSHSPSSPVLSRRPSDEVDHEHVPSGMATPFHPQYAEVETLSRVPSYSTAVRTTVRPHDSDLPDYDAVVAEDIPVPPPLQSPQQAHIRNAGRGSSQLFSSLDILHHRPGLGHSHSSSHDDEDRRLRLVQARARV

Annotated regions:
phrase: WPNKIEYSISTPTKAVIFGTSIRVDFKLIPLLKGLTIGQIVSQLIESHDLTLNPEDPDSIRNTYKNTRTILNDEFELDHDNALEIIDEAAEGYQFSRYLDLPKTLTRCLQDTDTKGIKVRHKLKFRVQLMNPDGHISELRATLPVSIFISP
type: DOMAIN
name: Arrestin_C-like
description: Arrestin C-terminal-like domain

phrase: FDIRLDEDYIVFRGGEQEAASAHLSGKLLLCLSEPLSIKHIRLHLTGISRVCWHLPSSSAGGGRKSWRERVIYEKTWRFRDPGKGKTEILPAGNYEYPFNLVLEGNMPESIEGLSDTYITYRFKAEIGRKYAKDIIVRKPLRIIRT
type: DOMAIN
name: Arrestin-like_N
description: Arrestin-like, N-terminal

phrase: WPNKIEYSISTPTKAVIFGTSIRVDFKLIPLLKGLTIGQIVSQLIESHDLTLNPEDPDSIRNTYKNTRTILNDEFELDHDNALEIIDEAAEGYQFSRYLDLPKTLTRCLQDTDTKGIKVRHKLKFRVQLMNPDGHISELRATLPVSIFISP
type: DOMAIN
name: Arrestin_C-like
description: Arrestin C-terminal-like domain
Protein sequence:
MSTARTENPVIMGLSSQNGQLRGPVKASAGPGGGGTQPQPQLNQLKNTSTINNGTPQQAQSMAATIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHSEPAEDEKP

Annotated regions:
phrase: NEFEDYCLKRELLMGIFEMGWEKPSPIQ
type: DOMAIN
name: RNA_helicase_DEAD_Q_motif
description: RNA helicase, DEAD-box type, Q motif

phrase: ELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRF
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: GWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYEINLMEELTLKGVTQ
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: KVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRF
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: IPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKPYE
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: GVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKS
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: SPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQ
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: VLDEADKL
type: CONSERVED_SITE
name: RNA-helicase_DEAD-box_CS
description: ATP-dependent RNA helicase DEAD-box, conserved site
Protein sequence:
MRRDLFAMPPGIYLDGNSLGLMPHAAREAVLRRLTEWETLAVGGWDSWFGLAESLSPSVARLVGALPHEVIATGSITANLHALLATLYRPQGARRHLVATSLDFPSDVYALQSWAQRHGAEVRLIPSRDGNTLEEEDILAALTDDVAVALLPTVLYRSGQLLDVEGLTRQARERGVLIGWDAAHSVGSVPHDLHVAGADFAVWCHYKYVNAGPGAPGGLFLHERHHGLLPGLRGWWGHDKGTQFEMAHTFRPATGAGAHQLGTPPILALAALEGALTVFDTVSMEEVRARSLALTNHLMTLVDAHLPEMRVVTPREPERRGGHVALAHPEAHALSLALRARGIVPDFRQPDILRLAPVALYNTEAEVGETVRVLRELLDTGAHRAVEAAGLVT

Annotated regions: