nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MRKLTALFGERHLLEHIRVEDMTMDSRCVKAGCLFVAVKGHSRDGRQYIAQAIEAGAAAVIAECDEAEQHLQVRLQNEVPVLSYFRLAENLSRLAGEFYDSPSDKLRLVGVTGTNGKTTVSQLLAQWSTLLGHKSAVMGTIGNGLLGEVKAAENTTASAVEIQSSLSRFVCSGADFAAIEVSSHGLVQHRVEALHFAAGIFTNLSRDHLDYHHSMENYAAAKKRLFAELDCACKIINADDEIGCRWLREFPDAVAVSSRAEFKPANQRWLQAKAVRFSERGALIEFDSSWGQGHLQSSLIGAFNVSNLLLALATLLALGYELSALIRTAAHLQGVCGRMERIASSQGPTVIVDYAHTPDALEKALQAARLHCRSALWCLFGCGGDRDRGKRPLMAEIAEKLADHVITTDDNPRTEDPKGIMADICAGFSAPEKVTVVHQREQAIKTAIESAAAGDVILIAGKGHEDYQIIGTEKQHFSDQECAAKYL

Annotated regions:
phrase: VTGTNGKTTVSQLLAQWSTLLGHKSAVMGTIGNGLLGEVKAAENTTASAVEIQSSLSRFVCSGADFAAIEVSSHGLVQHRVEALHFAAGIFTNLSRDHLDYHHSMENYAAAKKRLFAELDCACKIINADDEIGCRWLREFPDAVAVSSRAEFKPANQRWLQAKAVRFSERGALIEFDSSWGQGHLQSSLIGAFNVSNLLLALA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRMERIASSQGPTVIVDYAHTPDALEKALQAARLHCRSALWCLFGCGGDRDRGKRPLMAEIAEKLADHVITTDDNPRTEDPKGIMADICAGFSAPEKVTVVHQREQAIKTAIESAAAGDVILIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: MTMDSRCVKAGCLFVAVKGHSRDGRQYIAQAIEAGAAAVIAECDEAEQHLQVRLQNEVPVLSYFRLAENLSRLAGEF
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain
Protein sequence:
MVMEVGILDAGGLRALLREGAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKGAMGLEHIVPNAELRGRLLAGAYHAVVLLDERSASLDGAKRDGTLALAAGALCREARSTQVFFLQGGYEAFSASCPELCSKQSTPTGLSLPLSTSVPDSAESGCSSCSTPLYDQGGPVEILSFLYLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEAIDFIDSIKDAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSFMGQLLQFESQVLAPHCSAEAGSPAMAVLDRGTSTTTVFNFPVSIPVHPTNSALNYLKSPITTSPSC

Annotated regions:
phrase: VHCQAGISRS
type: ACTIVE_SITE
name: Tyr_Pase_AS
description: Protein-tyrosine phosphatase, active site

phrase: LYLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEAIDFIDSIKDAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSFMGQLLQFES
type: DOMAIN
name: Dual-sp_phosphatase_cat-dom
description: Dual specificity phosphatase, catalytic domain

phrase: GAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKGAMGLEHIVPNAELRGRLLAGAYHAVVLLDERSASLDGAKRDGTLALAAGALCREARSTQVFFLQGGYEAFSASCPELC
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain

phrase: FEGHYQYKSIPVEDNHKADISSWFNEAIDFIDSIKDAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSFMGQLLQFESQVLAPHCSA
type: DOMAIN
name: Tyr_Pase_cat
description: Protein-tyrosine phosphatase, catalytic

phrase: NEAIDFIDSIKDAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQR
type: DOMAIN
name: Tyr_Pase_dom
description: Tyrosine-specific protein phosphatases domain

phrase: LRALLREGAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKGAMGLEHIVPNAELRGRLLAGAYHAVVLLDERSASLDGAKRDGTLALAAGALCREARSTQVFFLQGGYEAFS
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain

phrase: AGGLRALLREGAAQCLLLDCRSFFAFNAGHIAGSVNVRFSTIVRRRAKGAMGLEHIVPNAELRGRLLAGAYHAVVLLDERSASLDGAKRDGTLALAAGALCREARSTQVFFLQGGYEAFSASCP
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain

phrase: GPVEILSFLYLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEAIDFIDSIKDAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSFMGQLLQFESQVL
type: DOMAIN
name: TYR_PHOSPHATASE_DUAL_dom
description: Dual specificity protein phosphatase domain

phrase: GPVEILSFLYLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEAIDFIDSIKDAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSFMGQLLQFES
type: DOMAIN
name: TYR_PHOSPHATASE_DUAL_dom
description: Dual specificity protein phosphatase domain
Protein sequence:
MAVAMDNAILENILRQVRPLIGQGKVADYIPALATVDGSRLGIAICTVDGQLFQAGDAQERFSIQSISKVLSLVVAMRHYSEEEIWQRVGKDPSGSPFNSLVQLEMEQGIPRNPFINTGALVVCDMLQGRLSAPRQRMLEVVRGLSGVSDISYDTVVARSEFEHSARNAAIAWLMKSFGNFHHDVTTVLQNYFHYCALKMSCVELARTFVFLANQGKAIHIDEPVVTPMQARQINALMATSGMYQNAGEFAWRVGLPAKSGVGGGIVAIVPHEMAIAVWSPELDDAGNSLAGIAVLEQLTKQLGRSVY

Annotated regions:
Protein sequence:
ASSSAATNASTTPDPGFWGQVGLGFSGFGKSLKENIQKGLRDAIAACGPTATPSPDWGKTRFGKAGDRLTAWWSDLGSAFQRWRHNITATHKRLTWRLGSWVAGLGGHNIDGLVAQAAAASLAQAADPLPTAAPANETSLAWFVFGFLVLFLAFLCGAVVAHWFRCPRHRRRLPGPHRADPAPPVALYAIALLALCTAVDGSRTNRLLQSSRACRLPNMGLLFGNCCNETDIVWCTGWVCWTAPGCSVCTERDGCWTSIGGGVSVRPATSSAEAKREAMDLFGFVGWCGVLAEGLGLGEYYAAGLVAGVYLVGGSHVPDLVCNVSCPQAEDSWWWRNAPTLAALWTFVQSVPAAVWSLIEAMPLLFGSYILFSLACGRWVQVILLLVSVPGALGACPVTYRGLTGGSTTACRPEDFVGNNTVCDCPFGLVVRNFNSSYAFLDLNFSCPESFFGHNEIFWTCGWGSWWWQHNNVERPYSHPYMPPSPFTAICYLTTNRTEIHNGSLLVYSSGYGLDNLGGAPITTCILDRRPDFCGDCLGGCFYEDGRHDRGFGVCGGGVRDGPWWFLPLATLRFGGWFTPEKSWVVPDDTTARRLASKYREGVGCGVVSGLINCWLCNVPFTTTGNATPPDGLWYPLPGEPTDICVNPQRRKQSLPWSPGWYSALEFASDLITGKLVCQAVPGHFPVCAHSAWFPRDGGFVVISEDTQVFGGGPRILRSFLGLLVALVVFMATAGARVVPALLMLSGFIAFGFTCYPPCAYAVCNYYL

Annotated regions:
phrase: HVPDLVCNVSCPQAEDSWWWRNAPTLAALWTFVQSVPAAVWSLIEAMPLLFGSYILFSLACGRWVQVILLLVSVPGALGACPVTYRGLTGGSTTACRPEDFVGNNTVCDCPFGLVVRNFNSSYAFLDLNFSCPESFFGHNEIFWTCGWGSWWWQHNNVERPYSHPYMPPSPFTAICYLTTNRTEIHNGSLLVYSSGYGLDNLGGAPITTCILDRRPDFCGDCLGGCFYEDGRHDRGFGVCGGGV
type: DOMAIN
name: GB_virus_envelope
description: GB virus, envelope protein
Protein sequence:
MSGTVGRVVVATHNAHKVAELQRILAEDLPDVMLEAYEGPEAVEDGVTFAENALIKAREAFEETGVPAIADDSGIAVDALEGAPGIFSARYAGTRDDRDNLELLLRNMEGRTDRGAAFVCAAAYVDGERELVEMGVWRGSVLEAPAGSGGFGYDPIFQPDDAPVSAAELTAEQKDALSHRRRAFRALAAALQAAEPTRG

Annotated regions:
Protein sequence:
MISTNDFRTGLTIELDGEVYQVIEFQHVKPGKGSPFVRSKLRNLMTGAVIEKTFNAGEKVPKAHVDRREVQYLYNDGDNFYCMDMETYDQFPLTKEQFGDAINYVKENTNLWVLFFKDKVIGVELPNFVELKVIDTPPGIKGDTASGGSKPATLETGYVVQVPFFVEVGDVLQIDTRTGQYIKRV

Annotated regions:
phrase: KPATLETGYVVQVPFFVEV
type: CONSERVED_SITE
name: Transl_elong_P/YeiP_CS
description: Translation elongation factor P/YeiP, conserved site

phrase: VELKVIDTPPGIKGDTASGGSKPATLETGYVVQVPFFVEVGDVLQIDTRTGQYIK
type: DOMAIN
name: Elong-fact-P_C
description: Elongation factor P, C-terminal

phrase: VELKVIDTPPGIKGDTASGGSKPATLETGYVVQVPFFVEVGDVLQIDTRTGQYIK
type: DOMAIN
name: Elong-fact-P_C
description: Elongation factor P, C-terminal

phrase: DRREVQYLYNDGDNFYCMDMETYDQFPLTKEQFGDAINYVKENTNLWVLFFKDKVIGVEL
type: DOMAIN
name: Transl_elong_P/YeiP_cen
description: Translation elongation factor P/YeiP, central

phrase: RREVQYLYNDGDNFYCMDMETYDQFPLTKEQFGDAINYVKENTNLWVLFFKDKV
type: DOMAIN
name: Transl_elong_P/YeiP_cen
description: Translation elongation factor P/YeiP, central

phrase: VELKVIDTPPGIKGDTASGGSKPATLETGYVVQVPFFVEVGDVLQIDTRTGQYIK
type: DOMAIN
name: Elong-fact-P_C
description: Elongation factor P, C-terminal

phrase: REVQYLYNDGDNFYCMDMETYDQFPLTKEQFGDAINYVKENTNLWVLFFKDKV
type: DOMAIN
name: Transl_elong_P/YeiP_cen
description: Translation elongation factor P/YeiP, central

phrase: STNDFRTGLTIELDGEVYQVIEFQHVKPGKGSPFVRSKLRNLMTGAVIEKTFNAGEK
type: DOMAIN
name: Transl_elong_KOW-like
description: Translation elongation factor, KOW-like
Protein sequence:
MVYSSSSMSNTNIRRRSVPITIQKSRMDGFAEANQLLSSALEQLDDIIRNGNSTSRSTTTIGSAGPTPIIKKSFRDLLPPPPALRSTFSPRIMENGHSNLAHKQHINDDIDNGNADDERSSREINRQWISTDWKHRTDLGSDGSSGVESPPSDLPTSSSSLFSPPRVYQEFVKAIDEQTMTERPDLETRLKIMQWVAGRTSPSPSMSTVSCPEYPELQDKLHRLAMARDSLQLQVSVLSEQVGAQKEKIKDLETVIALKRNNLTSTEELLQDKYHRIDECQELESKKMDLLAEVSSLKLRYATLEREKNETEKKLRLSQNEMDHVNQSMHGMVVQQQLAHHTNGHSSGGYMSPLREHRSEKNDDEMSQLRTAVQRLMADNEHKSLQINTLRNALDEQMRSRSQQEDFYASQRNYTDNFDVNAQIRRILMDEPSDSMSHSTSFPVSLSSTTSNGKGPRSTVQSSSSYNSSLSAVSPQHNWSSAGAGTPRQLHPIGGNQRVNNITSAQYCSPSPPAARQLAAELDELRRNGNEGANHNYSSASLPRGVGKASSTLTLPSKKLSVASGTSVGELGGSMSSVAQPTPKRNYRAQMNRWINEKLRRKRAVSAPNLVESDDEIARGRNLNNATSQSNLKNFSRERTRSSLRNIFSKLTRSTSQDQSNSFRRGSAARSTSTARLGSTNHLGTVSKRPPLSQFVDWRSEQLADWIAEIGYPQYMNEVSRHVRSGRHFLNMSMNEYEGVLNIKNPVHRKRVAILLRRIEEDIMEPAN

Annotated regions:
phrase: FVDWRSEQLADWIAEIGYPQYMNEVSRHVRSGRHFLNMSMNEYEGVLNIKNPVHRKRVAILLRRIEE
type: DOMAIN
name: SAM
description: Sterile alpha motif domain

phrase: FVDWRSEQLADWIAEIGYPQYMNEVSRHVRSGRHFLNMSMNEYEGVLNIKNPVHRKRVAILLR
type: DOMAIN
name: Liprin-beta_SAM_rpt_1
description: Liprin-beta, SAM domain repeat 1

phrase: WRSEQLADWIAEIGYPQYMNEVSRHVRSGRHFLNMSMNEYEGVLNIKNPVHRKRVAILLRRIEE
type: DOMAIN
name: SAM
description: Sterile alpha motif domain

phrase: DWRSEQLADWIAEIGYPQYMNEVSRHVRSGRHFLNMSMNEYEGVLNIKNPVHRKRVAILLR
type: DOMAIN
name: SAM
description: Sterile alpha motif domain
Protein sequence:
MKALVKREAAKGIWLEEVPVPTPGPNEVLIKLEKTAICGTDLHIYLWDEWSQRTIKPGLTIGHEFVGRVAALGSAVTGYEIGQRVSAEGHIVCGHCRNCRGGRPHLCPNTVGIGVNVNGAFAEYMVMPASNLWPIPDQIPSELAAFFDPYGNAAHCALEFNVIGEDVLITGAGPIGIIAAGICKHIGARNVVVTDVNDFRLKLAADMGATRVVNVANQSLKDVMKELHMEGFDVGLEMSGNPRAFNDMLDCMYHGGKIAMLGIMPKGAGCDWDKIIFKGLTVQGIYGRKMYETWYKMTQLVLSGFPLGKVMTHQLPIDDFQKGFDLMEEGKAGKVVLSWN

Annotated regions:
phrase: GPNEVLIKLEKTAICGTDLHIYLWDEWSQRTIKPGLTIGHEFVGRVAALGSAVTGYEIGQRVSAEGHIVCGHCRNCRGGRPHLCPNTVGIGVNVNGAFAEYMVMPASNLWPIP
type: DOMAIN
name: ADH-like_N
description: Alcohol dehydrogenase-like, N-terminal

phrase: GHEFVGRVAALGSA
type: CONSERVED_SITE
name: ADH_Zn_CS
description: Alcohol dehydrogenase, zinc-type, conserved site

phrase: PIGIIAAGICKHIGARNVVVTDVNDFRLKLAADMGATRVVNVANQSLKDVMKELHMEGFDVGLEMSGNPRAFNDMLDCMYHGGKIAMLGIMPKGAGCDWDKIIFKGLTVQGIYGRKMYETWYKMTQL
type: DOMAIN
name: ADH-like_C
description: Alcohol dehydrogenase-like, C-terminal

phrase: GIWLEEVPVPTPGPNEVLIKLEKTAICGTDLHIYLWDEWSQRTIKPGLTIGHEFVGRVAALGSAVTGYEIGQRVSAEGHIVCGHCRNCRGGRPHLCPNTVGIGVNVNGAFAEYMVMPASNLWPIPDQIPSELAAFFDPYGNAAHCALEFNVIGEDVLITGAGPIGIIAAGICKHIGARNVVVTDVNDFRLKLAADMGATRVVNVANQSLKDVMKELHMEGFDVGLEMSGNPRAFNDMLDCMYHGGKIAMLGIMPKGAGCDWDKIIFKGLTVQGIYGRKMYETWYKMTQLVLSGFPLGKVMTHQLPIDDFQKGFDLMEEGKAGKVV
type: DOMAIN
name: PKS_ER
description: Polyketide synthase, enoylreductase domain
Protein sequence:
MARTIKIFDTTLRDGEQTPGVNLNLQEKLEIAKQLVRLGVDVIEGGFAIASPGDFESIMTLSRNLKGVTIASLCRSVEKDIDRAWEAVQYAESPRIHTFIATSDIHMKYKLKMTEEEVLERAVSMVKRAKGYCSNVEFSAEDASRTREEFLYRVVEAVIKAGATTVNIPDTVGYSTPLEFGRLIRNIRNNVPNIDKADISVHCHNDLGLAVANSLAAVENGAVQVECTINGLGERAGNAALEEIIMGINTRKDYYDITHRIDTTQIYRASRLVSSLTGVNVQPNKAIVGANAFAHESGIHQHGVLSEKTTYEIMTPESVGMGTNRMVLGKLSGRHAFEDRLKEMGYSLSDEEVKTAFAKFKDLADKKKVVTDKDIEALVDENIAVPEIFVIDSFQINSGNKMISTSTVSVRKDEEIITEAATGDGPVDAAFNAVERATGVNAELVHYRIKAVTEGKDALGEVTVKISNNNSIFMGKGVSTDIIEASVKAYLNAINRSISEIGESIISQ

Annotated regions:
phrase: VTDKDIEALVDENIAVPEIFVIDSFQINSGNKMISTSTVSVRKDEEIITEAATGDGPVDAAFNAVERATGVNAELVHYRIKAVTEGKDALGEVTVKISNNNSIFMGKGVSTDIIEASVKAYLNAINR
type: DOMAIN
name: 2-isopropylmalate_synth_dimer
description: 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain

phrase: IKIFDTTLRDGEQTPGVNLNLQEKLEIAKQLVRLGVDVIEGGFAIASPGDFESIMTLSRNLKGVTIASLCRSVEKDIDRAWEAVQYAESPRIHTFIATSDIHMKYKLKMTEEEVLERAVSMVKRAKGYCSNVEFSAEDASRTREEFLYRVVEAVIKAGATTVNIPDTVGYSTPLEFGRLIRNIRNNVPNIDKADISVHCHNDLGLAVANSLAAVENGAVQVECTINGLGERAGNAALEEIIMGINTRKDYYDITHRIDTTQI
type: DOMAIN
name: PYR_CT
description: Pyruvate carboxyltransferase

phrase: LRDGEQTPGVNLNLQE
type: CONSERVED_SITE
name: AIPM/Hcit_synth_CS
description: Alpha-isopropylmalate/homocitrate synthase, conserved site

phrase: IKIFDTTLRDGEQTPGVNLNLQEKLEIAKQLVRLGVDVIEGGFAIASPGDFESIMTLSRNLKGVTIASLCRSVEKDIDRAWEAVQYAESPRIHTFIATSDIHMKYKLKMTEEEVLERAVSMVKRAKGYCSNVEFSAEDASRTREEFLYRVVEAVIKAGATTVNIPDTVGYSTPLEFGRLIRNIRNNVPNIDKADISVHCHNDLGLAVANSLAAVENGAVQVECTINGLGERAGNAALEEIIMGINTRKDYYDITHRIDTTQIYRASRL
type: DOMAIN
name: PYR_CT
description: Pyruvate carboxyltransferase

phrase: ISVHCHNDLGLAV
type: CONSERVED_SITE
name: AIPM/Hcit_synth_CS
description: Alpha-isopropylmalate/homocitrate synthase, conserved site

phrase: IVGANAFAHESGIHQHGVLSEKTTYEIMTPESVGMGTNRMVLGKLSGRHAFEDRLKEMGYSLSDEEVKTAFAKFKDLADKK
type: DOMAIN
name: LeuA/HCS_post-cat
description: 2-isopropylmalate synthase/homocitrate synthase, post-catalytic domain

phrase: VVTDKDIEALVDENIAVPEIFVIDSFQINSGNKMISTSTVSVRKDEEIITEAATGDGPVDAAFNAVERATGVNAELVHYRIKAVTEGKDALGEVTVKISNNNSIFMGKGVSTDIIEASVKAYLNAINRS
type: DOMAIN
name: 2-isopropylmalate_synth_dimer
description: 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain
Protein sequence:
MNRTKLVLGAVILGSTLLAGCSSNAKIDQLSSDVQTLNAKVDQLSNDVNAIRSDVQAAKDDAARANQRLDNQVRTYKK

Annotated regions:
phrase: KIDQLSSDVQTLNAKVDQLSNDVNAIRSDVQAAKDDAARANQRLDNQVRTYK
type: DOMAIN
name: Lipoprotein_leucine-zipper_dom
description: Lipoprotein leucine-zipper
Protein sequence:
MVKKPRMATPAASKGVKLDPGMKTILEKEPGLKTTLQQIEKSFGDGAIMPLGASQKLTIDCISTGSLSLDMALGGKGIPRGRIIEVFGPESSGKTTLALHIGAEAQKSGGIAAIIDAEHAFDPSWAKKLGVELDSLLVSQPSSGEEAMQICEMLVKSNAVDVIIIDSVAALVPKAELEGEIGDSHVGLQARLMSQSMRKLTGAIAKSKSAVVFINQIREKVGVMFGSPETTPGGRALKFYCSCRIDVRRIGSLKDGEEQVGQRVKAKIVKNKVAPPFRIAEFDMMHSNGISFEGDLLDLGTENKVVNRSGSWFKYGDTYLGQGKEKARNFLIENPDVSDEIKQKVLAAGGFVAPLEVDADESEEAVEDGEAVANS

Annotated regions:
phrase: RGRIIEVFGPESSGKTTLALHIGAEAQKSGGIAAIIDAEHAFDPSWAKKLGVELDSLLVSQPSSGEEAMQICEMLVKSNAVDVIIIDSVAALVPKAELEGEIGDSHVGLQARLMSQSMRKLTGAIAKSKSAVVFINQIREKVGVMFGSPETTPGGRALKFYCSCRIDVRRI
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: TIDCISTGSLSLDMALGGKGIPRGRIIEVFGPESSGKTTLALHIGAEAQKSGGIAAIIDAEHAFDPSWAKKLGVELDSLLVSQPSSGEEAMQICEMLVKSNAVDVIIIDSVAALVPKAELEGEIGDSHVGLQARLMSQSMRKLTGAIAKSKSAVVFINQ
type: DOMAIN
name: RecA_ATP-bd
description: DNA recombination and repair protein RecA-like, ATP-binding domain

phrase: GDLLDLGTENKVVNRSGSWFKYGDTYLGQGKEKARNFLIENPDVSDEIKQKVL
type: DOMAIN
name: RecA-like_C
description: RecA-like, C-terminal

phrase: GVMFGSPETTPGGRALKFYCSCRIDVRRIGSLKDGEEQVGQRVKAKIVKNKVAPPFRIAEFDMMHSNGISFEG
type: DOMAIN
name: RecA_monomer-monomer_interface
description: DNA recombination and repair protein RecA, monomer-monomer interface

phrase: LKTTLQQIEKSFGDGAIMPLGASQKLTIDCISTGSLSLDMALGGKGIPRGRIIEVFGPESSGKTTLALHIGAEAQKSGGIAAIIDAEHAFDPSWAKKLGVELDSLLVSQPSSGEEAMQICEMLVKSNAVDVIIIDSVAALVPKAELEGEIGDSHVGLQARLMSQSMRKLTGAIAKSKSAVVFINQIREKVGVMFGSPETTPGGRALKFYCSCRIDVRRIGSLKDGEEQVGQRVKAKIVKNKVAPPFRIAEFDMMHSNGI
type: DOMAIN
name: RecA-like_N
description: RecA-like, N-terminal
Protein sequence:
MKKIKCALIGSGNIGTDLLYKLKRSEILEPVWMVGIDPDSEGLARARELGIKTTADGIDGLIPHIEADEIKIAFDATSAYVHGENSAKVNAKGVLMIDLTPAAIGPFCVPPVNLNQLNADIKNVNMVTCGGQATIPMVAAVSRVQPVEYGEIVATVSSKSVGPGTRQNIDEFTRTTSGAVEQIGGAKKGKAIIIINPAEPPLLMRDTIHCLTETEPDQAAITASVHEMIAEVQKYVPGYKLKNGPVFDGRKVSIFLEVEGLGDYLPKYAGNLDIMTASAARTAEMFALQMLGQSPSDSQS

Annotated regions:
phrase: KCALIGSGNIGTDLLYKLKRSEILEPVWMVGIDPDSEGLARARELGIKTTADGIDGLIPHIEADEIKIAFDATSAYVHGENSAKVNAKGVLMIDLTPAAIGPFCVPPVNLNQLNA
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: CGGQATIPMVAAVSRVQPVEYGEIVATVSSKSVGPGTRQNIDEFTRTTSGAVEQIGGAKKGKAIIIINPAEPPLLMRDTIHCLTETEPDQAAITASVHEMIAEVQKYVPGYKLKNGPVFDGRKVSIFLEVEGLGDYL
type: DOMAIN
name: Acetylaldehyde_DH_C
description: Acetaldehyde dehydrogenase, C-terminal
Protein sequence:
MQQLNPSEISDIIKQRIEKLDVASEARNEGTVVSVSDGIVKIHGLADAMFGEMIEFPGSIFGMVLNLERDSVGAVVLGDYLQLEEGMTAQCTGRILEVPVGPELIGRVVDPLGVPIDGKGELDTKLTDAVEKVAPGVITRQSVDEPIQTGLKSIDAMVPIGRGQRELIIGDRQIGKSAIAIDTIINQKGKGVTCVYVAIGQKQSTIANVVRKLEEHGAMEHTIVVAAGAADPAPMQFLAAYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNADHVEKLTNGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETNLFNSGVRPAINAGLSVSRVGGSAQTKIIKKLGGSVRLALAQYRELAAFSQFASDLDEATRKQLEHGQRVTELMKQNQYSPLSVAEMAVSLYAANEGFLDDVEVSKVLDFERALHAYMKSEHAELLDKINQSGGYDDEIQQGLKSGLETFKSTQTW

Annotated regions:
phrase: PAINAGLSV
type: ACTIVE_SITE
name: ATPase_a/bsu_AS
description: ATPase, alpha/beta subunit, nucleotide-binding domain, active site

phrase: QTKIIKKLGGSVRLALAQYRELAAFSQFASDLDEATRKQLEHGQRVTELMKQNQYSPLSVAEMAVSLYAANEGFLDDVEVSKVLDFERALHAYMKSEHAELLDKINQSGGYDDEIQQGLKSGLE
type: DOMAIN
name: ATP_synth_asu_C
description: ATP synthase, alpha subunit, C-terminal

phrase: GLKSIDAMVPIGRGQRELIIGDRQIGKSAIAIDTIINQKGKGVTCVYVAIGQKQSTIANVVRKLEEHGAMEHTIVVAAGAADPAPMQFLAAYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNADHVEKLTNGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETNLFNSGVRPAINAGLSV
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_nucl-bd
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain

phrase: IKKLGGSVRLALAQYRELAAFSQFASDLDEATRKQLEHGQRVTELMKQNQYSPLSVAEMAVSLYAANEGFLDDVEVSKVLDFERALHAYMKSEHAELLDKINQSGGYDDEIQQGLKSGLETFKS
type: DOMAIN
name: ATP_synth_asu_C
description: ATP synthase, alpha subunit, C-terminal

phrase: ILEVPVGPELIGRVVDPLGVPIDGKGELDTKLTDAVEKVAPGVITRQSVDEPIQTGLKSIDAMVPIGRGQRELIIGDRQIGKSAIAIDTIINQKGKGVTCVYVAIGQKQSTIANVVRKLEEHGAMEHTIVVAAGAADPAPMQFLAAYSGCTMGEYFRDRGEDALIVYDDLSKQAVAYRQVSLLLRRPPGREAYPGDVFYLHSRLLERAARVNADHVEKLTNGEVKGKTGSLTALPIIETQGGDVSAFVPTNVISITDGQIFLETNLFNSGVRPAINAGLSVSRV
type: DOMAIN
name: ATP_synth_F1_a_nt-bd_dom
description: ATP synthase, F1 complex, alpha subunit nucleotide-binding domain

phrase: EGTVVSVSDGIVKIHGLADAMFGEMIEFPGSIFGMVLNLERDSVGAVVLGDYLQLEEGMTAQCT
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_N
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain
Protein sequence:
MGQKVNPVGLRIGIIRDWDSRWYAEKDYADLLHEDLKIREYINKRLQDAAVSRIEIERAANRVNITIHTAKPGMVIGKGGSEVEALRKALTQLTGKRVHINIVEIKKPDLDAKLVAENIARQLENRVSFRRAQKQAIQRAMRAGAKGIKTMVSGRLGGADIARSEHYSEGTVPLHTLRADIDYATAEADTTYGKLGVKVWIYRGEVLPTKKKTEEGGK

Annotated regions:
phrase: IREYINKRLQDAAVSRIEIERAANRVNITIHTAKPGMVIGKGGSEVEALRKALTQLTGKRVHINIVEI
type: DOMAIN
name: KH_dom_type_2
description: K Homology domain, type 2

phrase: AANRVNITIHTAKPGMVIGKGGSEVEALRKALTQLTGKRVHINIVEIKKPDLDAKLVAENIARQL
type: DOMAIN
name: KH_dom
description: K Homology domain

phrase: KIREYINKRLQDAAVSRIEIERAANRVNITIHTAKPGMVIGKGGSEVEALRKALTQLTGKRVHINIVEIKKPD
type: DOMAIN
name: KH_dom_type_2
description: K Homology domain, type 2

phrase: IARQLENRVSFRRAQKQAIQRAMRAGAKGIKTMVSGRLGGADIARSEHYSEGTVPLHTLRADIDYATAEADTTYGKLGVKVW
type: DOMAIN
name: Ribosomal_uS3_C
description: Small ribosomal subunit protein uS3, C-terminal

phrase: ARSEHYSEGTVPLHTLRADIDYATAEADTTYGKL
type: CONSERVED_SITE
name: Ribosomal_uS3_CS
description: Small ribosomal subunit protein uS3, conserved site
Protein sequence:
MSAIAPGMILFAYLCGSISSAILVCRIAGLPDPRESGSGNPGATNVLRIGGKGAAVAVLIFDILKGMLPVWGAYALGVTPFWLGLIAIAACLGHIWPVFFGFKGGKGVATAFGAIAPIGWDLTGVMAGTWLLTVLLSGYSSLGAIVSALIAPFYVWWFKPQFTFPVSMLSCLILLRHHDNIQRLWRRQETKIWTKLKKKRQKD

Annotated regions:
Protein sequence:
MAGRGTRYLLLLLGVVSLAQASIFLSSQRLKARFQRDRRNIRPNIILILTDDQDMELGSMQAMNKTRRIMEQGGTHFSNAFVTTPMCCPSRSSMLTGKYVHNHNTYTNNENCSSPSWQAQHETRTFGVYLNNTGYRTGFFGKYLNEYNGSYIPPGWREWVGLIKNSRFYNYTLCRNGVREKHGCEYPKDYFTDLITEDSINYFRSSKRIYPHRPVMMVMSHAAPHGPEDSAPQYSTAFPNASQHITPSYNYAPNPDKHWIMRYTGAMKPIHMEFTNMLQRKRLQTLLSVDESVEKVYNMLAETGELDNTYIIYTADHGYHVGQFGLVKGKSMPYEFDIRVPFYIRGPNVEAGAINPHMVLNIDLAPTILDIAGMDVPPDMDGKSILKLLDIERPVNRFQVNKKGKVWRDSFLVERGKLLHIRDAPPGKDVAQEENFLPKYQRVKDLCQRAEYQTPCQQLGQKWQCLEDATGKMRLYKCKGMASMSAARKDGPANIKSKYYPQREAERNTEHDGCNCDQYPKMKAIKSYARNRYSRSVEMEIGGDLYAVDLEDGYQPVPAPRNLSQAGARTPRDDSEDDFSGMGVTVTVTPRTSNNSLAIVSSGIKVTHRCSILANDTVKCDTGIYKSLQAWKDHKLHIDHEIETLQTKIKNLREVRGHLKKARPEECDCNHYMKGQDKKAWLLKEQKRRKKMRKLLKRLRNNDTCSMPGLTCFTHDNQHWQTAPFWTMGPFCACTSANNNTYWCLRTINETHNFLFCEFATGFLEYFD

Annotated regions:
phrase: KSYARNRYSRSVEMEIGGDLYAVDLEDGYQPVPAPRNLSQAGARTPRDDSEDDFSGMGVTVTVTPRTSNNSLAIVSSGIKVTHRCSILANDTVKCDTGIYKSLQAWKDHKLHIDHEIETLQTKIKNLREVRGHLKKARPEECDC
type: DOMAIN
name: Extracellular_sulfatase_C
description: Extracellular sulfatase, C-terminal

phrase: PNIILILTDDQDMELGSMQAMNKTRRIMEQGGTHFSNAFVTTPMCCPSRSSMLTGKYVHNHNTYTNNENCSSPSWQAQHETRTFGVYLNNTGYRTGFFGKYLNEYNGSYIPPGWREWVGLIKNSRFYNYTLCRNGVREKHGCEYPKDYFTDLITEDSINYFRSSKRIYPHRPVMMVMSHAAPHGPEDSAPQYSTAFPNASQHITPSYNYAPNPDKHWIMRYTGAMKPIHMEFTNMLQRKRLQTLLSVDESVEKVYNMLAETGELDNTYIIYTADHGYHVGQFGLVKGKSMPYEFDIRVPFYIRGPNVEAGAINPHMVLNIDLAPTILDIAG
type: DOMAIN
name: Sulfatase_N
description: Sulfatase, N-terminal

phrase: PMCCPSRSSMLT
type: CONSERVED_SITE
name: Sulfatase_CS
description: Sulfatase, conserved site
Protein sequence:
MTPPTMLQTAPVESFNLNPKSTQQAINLKSDAKNGKVSFADWNEFKFAPIRESTVSRAMTRRYFADLDKFAESDIVIIGAGSAGLSAAYTLGKNRPDLKIAIIEASVSPGGGCWLGGQLFSAMVLRKPAHLFLDDMGLDYEDEGDYVVVKHAALFMSTLMSKVLQFPNIKLFNATAVEDLITRKDPATNLQRIAGVVVNWAQLDHDTQSCMDPNTINCNVVLSTSGHDGPFGAFTAKRLEQLGRAPRDVTAGFTKPSITTSKLQEPEPISNFQLGGMKGLDMNKAEDAIVKGTREVVPGLVIAGMELAEVDGSNRMRPTFGAMALSGVKAAESVLNVLELRKQQNEACYGAYKG

Annotated regions:
Protein sequence:
VAVGSSSHISSRDGLGTSSGTEDDTPGAAGRREGKFTARSERTLGRAGGGPPQIYPWMRKLHISHDNIGGPRGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKLKSMSMAAAGGAFRP

Annotated regions:
phrase: IAHALCLSERQIKIWFQNRRMKW
type: CONSERVED_SITE
name: Homeobox_CS
description: Homeobox, conserved site

phrase: NRYLTRRRRIE
type: DOMAIN
name: HD_metazoa
description: Homeodomain, metazoa

phrase: LCLSERQIKI
type: DOMAIN
name: HD_metazoa
description: Homeodomain, metazoa

phrase: WFQNRRMKW
type: DOMAIN
name: HD_metazoa
description: Homeodomain, metazoa

phrase: PRGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK
type: DOMAIN
name: HD
description: Homeodomain

phrase: IYPWM
type: CONSERVED_SITE
name: Homeobox_Antennapedia_CS
description: Homeobox protein, antennapedia type, conserved site

phrase: KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKD
type: DOMAIN
name: HD
description: Homeodomain

phrase: KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWK
type: DOMAIN
name: HD
description: Homeodomain

phrase: GKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDNKL
type: DOMAIN
name: HD
description: Homeodomain
Protein sequence:
MWLGVITLFPEMFRAVTDFGVTGRAVKNGLLELHTWNPRDFTHDRHSTVDDRPYGGGPGMLMMVQPLRDAIHAAKAAAGEEAKVIYLSPQGRKLDQQGVTELAESSRLILVCGRYEGIDERIIQTEVDEEWSVGDYVLSGGELPAMTLIDAVSRLVPGVLGKQASAEQDSFSDGLLDCPHYTRPESLDGLDVPAVLLSGNHEQIRLWRLQQSLGRTFLRRPELFENLALTDEQSTLLAQFVEAMDKNA

Annotated regions:
phrase: GRAVKNGLLELHTWNPRDFTHDRHSTVDDRPYGGGPGMLMMVQPLRDAIHAAKAAAGEEAKVIYLSPQGRKLDQQGVTELAESSRLILVCGRYEGIDERIIQTEVDEEWSVGDYVLSGGELPAMTLIDAVSRLVPGVLGKQASAEQDSFSDGLLDCPHYTRPESLDGLDVPAVLLSGNHEQIRLWRLQQSLGRTFLRR
type: DOMAIN
name: tRNA_MeTrfase_TRMD/TRM10
description: tRNA methyltransferase TRMD/TRM10-type domain
Protein sequence:
MTEKLNEIVVRKTKNVEDHVLDVIVLFNQGIDEVILKGTGREISKAVDVYNSLKDRLGDGVQLVNVQTGSEVRDRRRISYILLRLKRVY

Annotated regions:
phrase: NEIVVRKTKNVEDHVLDVIVLFNQGIDEVILKGTGREISKAVDVYNSLKDRLGDGVQLVNVQT
type: DOMAIN
name: DNA/RNA-bd_Alba-like
description: DNA/RNA-binding protein Alba-like
Protein sequence:
MTTQRSPGLFRRLAHGSLVKQILVGLVLGILLAWISKPAAEAVGLLGTLFVGALKAVAPILVLMLVMASIANHQHGQKTNIRPILFLYLLGTFSAALAAVVFSFAFPSTLHLSSSAGDISPPSGIVEVMRGLVMSMVSNPIDALLKGNYIGILVWAIGLGFALRHGNETTKNLVNDMSNAVTFMVKLVIRFAPIGIFGLVSSTLATTGFSTLWGYAQLLVVLVGCMLLVALVVNPLLVWWKIRRNPFPLVLLCLRESGVYAFFTRSSAANIPVNMALCEKLNLDRDTYSVSIPLGATINMAGAAITITVLTLAAVNTLGIPVDLPTALLLSVVASLCACGASGVAGGSLLLIPLACNMFGISNDIAMQVVAVGFIIGVLQDSCETALNSSTDVLFTAAACQAEDDRLANSALRN

Annotated regions:
Protein sequence:
MALFHVRMDVAIPRDLDPKVRDETIAKEKAYSQELQRSGKWPEIWRIVGQYSNISIFDVESADELHEILWNLPLFPYMNIEIMPLTKHGSDVK

Annotated regions:
phrase: LFHVRMDVAIPRDLDPKVRDETIAKEKAYSQELQRSGKWPEIWRIVGQYSNISIFDVESADELHEILWNLPLFPYMNIEIMPLTKHGS
type: DOMAIN
name: MLI_dom
description: Muconolactone isomerase domain
Protein sequence:
MHVKKGDKVVVISGKDKGKQGVILAAFPKNDRVLVEGINLVKKHSKPTQANPQGGISEQEAPIHVSNVMPLDPKTGEVTRVGYKVEDGKKVRVAKKSGQVLDK

Annotated regions:
phrase: GDKVVVISGKDKGKQGV
type: CONSERVED_SITE
name: Ribosomal_uL24_CS
description: Large ribosomal subunit protein uL24, conserved site

phrase: HVKKGDKVVVISGKDKGKQGVILAAFP
type: DOMAIN
name: KOW
description: KOW

phrase: GDKVVVISGKDKGKQGVILAAFPKNDRVLVEGINLVKKHSKPTQANPQGGISEQEAPIHVSNV
type: DOMAIN
name: Ribosomal_uL24_KOW
description: Large ribosomal subunit protein uL24, KOW domain

phrase: KGDKVVVISGKDKGKQGVILAAFPKNDRVLV
type: DOMAIN
name: KOW
description: KOW
Protein sequence:
MSSTPNKQAGYPRLVADIGGTNARFALETAPRVIEKAAVLPCKDYDTVTDAVRAYLNQSGATAVRHAAFAIANPILGDWVQMTNHHWAFSIETTRQTLGLDTLILLNDFTAQALAVTQTSSKDLMQVGGQKPVEFAPKAVIGPGTGLGVSGLVHSHAGWVALAGEGGHTSFPPFDDMEVLIWQYAKNKYGHVSAERFLSGAGLSLVYEALAAKQKAKPAKLMPSEITEKALSGASPLCRQTLDIFCAMLGTVASNLALTLGARGGVYLCGGIIPRVLEYFKTSPFRSRFENKGRFEAYLAAIPVYVVLSEFPGISGAAAALDNHLRNV

Annotated regions: