nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTPITPQEALQRTIEHREIFHDEMLHLMRMIMSGELSPVMTAAITTGLRVKKETIGEITAAAQVMREFSHKVQVHDTKHLVDIVGTGGDGANTFNISTCATFVIAAAGAKVSKHGGRSVSSKSGSADAMEALGVHINLQPAQIAQCIGDVGIGFMFAPNHHPAMKNVAPVRKELGVRTIFNILGPLTNPAGAPNILMGVFHEDLVGIQVRALQRLGAEHALVVYGRDGLDEISLGAGTLVGELKDGAVREYEIHPEDFGLRMAGTRALRVENPTESKAMLMGVLQGDEGPARDIVCLNAGAALYAANVADSLEDGLRRAQQALASGAALAKLQQLVAYTQKLAA

Annotated regions:
phrase: QEALQRTIEHREIFHDEMLHLMRMIMSGELSPVMTAAITTGLRVKKETIGEITAAAQVMRE
type: DOMAIN
name: Glycosyl_Trfase_fam3_N_dom
description: Glycosyl transferase family 3, N-terminal domain

phrase: KHLVDIVGTGGDGANTFNISTCATFVIAAAGAKVSKHGGRSVSSKSGSADAMEALGVHINLQPAQIAQCIGDVGIGFMFAPNHHPAMKNVAPVRKELGVRTIFNILGPLTNPAGAPNILMGVFHEDLVGIQVRALQRLGAEHALVVYGRDGLDEISLGAGTLVGELKDGAVREYEIHPEDFGLRMAGTRALRVENPTESKAMLMGVLQGDEGPARDIVCLNAGAALYAANVADSLEDGLRRAQQALASGAA
type: DOMAIN
name: Glycosyl_Trfase_fam3
description: Glycosyl transferase, family 3
Protein sequence:
MEGHVKRPMNAFMVWSRGERHKLAQQNPSMQNTEISKQLGCRWKSLTEAEKRPFFQEAQRLKILHREKYPNYKYQPHRRAKVSQRSGILQPAVASTKLYNLLQWDRNPHAITYRQDWSRAAHLYSKNQQSFYWQPVDIPTGHLQQQQQQQQQQQFHNHHQQQQQFYDHHQQQQQQQQQQQQFHDHHQQKQQFHDHHQQQQQFHDHHHHHQEQQFHDHHQQQQQFHDHQQQQQQQQQQQFHDHHQQKQQFHDHHHHQQQQQFHDHQQQQQQFHDHQQQQHQFHDHPQQKQQFHDHPQQQQQFHDHHHQQQQKQQFHDHHQQKQQFHDHHQQKQQFHDHHQQQQQFHDHHQQQQQQQQQQQQQFHDQQLTYLLTADITGWKGIKHCTGPDPEPF

Annotated regions:
phrase: VKRPMNAFMVWSRGERHKLAQQNPSMQNTEISKQLGCRWKSLTEAEKRPFFQEAQRLKILHREKYPNY
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain

phrase: VKRPMNAFMVWSRGERHKLAQQNPSMQNTEISKQLGCRWKSLTEAEKRPFFQEAQRLKILHREKYPNY
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain

phrase: HVKRPMNAFMVWSRGERHKLAQQNPSMQNTEISKQLGCRWKSLTEAEKRPFFQEAQRLKILHREKYPNYK
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain
Protein sequence:
MSSPDGGYASDDQNQGKCSVPIMMTGLGQCQWAEPMTSLGEGKLKSDAGSANSRSKAEARIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKSLTLAEKRPFVEEAERLRVQHMQDHPNYKYRPRRRKQVKRMKRAENGFMHMAEAQESAVLGADGRMCLENFSLGYHEQTYPHGQVPQSSHYREPQAVAPHYDGYSLPTPESSPLDLAEADPVFFTSPAQDECQMMPYSYNGSYPHQQNSMLVRQMPQTEQMGQVSPVQGMMACQSSPHMYYGQMYLPGSARHHQLHQAGQPSPPPEAQQMGRADHIQPADMLAEVDRTEFEQYLSYVAKSDLGMHYHAQESVVPTADNGPISSVLSDASTAVYYCNYPSA

Annotated regions:
phrase: VSPVQGMMACQSSPHMYYGQMYLPGSARHHQLHQAGQPSPPPEAQQMGRADHIQPADMLAEVDRTEFEQYLSYVAKSDLGMHYHAQESVVPTADNGPISSVLSDASTAVYYCNYP
type: DOMAIN
name: Sox_C
description: Sox, C-terminal

phrase: IRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKSLTLAEKRPFVEEAERLRVQHMQDHPNY
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain

phrase: YREPQAVAPHYDGYSLPTPESSPLDLAEADPVFFTSPAQDECQMMPYS
type: DOMAIN
name: Sox7/17/18_central
description: Sox 7/17/18, central domain

phrase: RRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKSLTLAEKRPFVEEAERLRVQHMQDHPNY
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain

phrase: RIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKSLTLAEKRPFVEEAERLRVQHMQDHPNYK
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain
Protein sequence:
MNTTPDMPTPRALRELTPLEARILGVLVEKQHTVPDTYPLSLNALTAGCNQKTARSPVMNVSEDEVTTAIDSLKHLSLVMEGSSSRVPRFEHNMNRVLGIPSQAIALLTILLLRGPQTAAELRLNSARLHGFADISSVEAFLDELAARAQPLVIRLPRAAGARENRWLHLMCGEVNVADFVGPDTGGGTDSVPPSEFEALKAEQKRLADEVARLNALVQRMATELGIDVDAPGDAG

Annotated regions:
Protein sequence:
MLRIDNLDKRYKTGDLALKGVSLHIGAGDIVGLIGPSGAGKSTLIRCVNRLVPPTGGSIRLGDTELTRLGGADLRRARRRIGMIFQEFALIERLTVMENVLSGRLGYVGFWASWFRRFPQADVQRAFALLARVGLSDQVDKRADALSGGQRQRVGIARALAQDPELLLIDEPTASLDPKTSRQVMRLITELCAERRLAAIVNIHDVALAQMFLPRIVGLRAGEVVYDGPASGLTPDVLTSIYGEEDWSKTSDDVEIVDAAPRAADLSAPLKLDPALARL

Annotated regions:
phrase: LKGVSLHIGAGDIVGLIGPSGAGKSTLIRCVNRLVPPTGGSIRLGDTELTRLGGADLRRARRRIGMIFQEFALIERLTVMENVLSGRLGYVGFWASWFRRFPQADVQRAFALLARVGLSDQVDKRADALSGGQRQRVGIARALAQDPELLLIDEPT
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: LRIDNLDKRYKTGDLALKGVSLHIGAGDIVGLIGPSGAGKSTLIRCVNRLVPPTGGSIRLGDTELTRLGGADLRRARRRIGMIFQEFALIERLTVMENVLSGRLGYVGFWASWFRRFPQADVQRAFALLARVGLSDQVDKRADALSGGQRQRVGIARALAQDPELLLIDEPTASLDPKTSRQVMRLITELCAERRLAAIVNIHDVALAQMFLPRIVGLRAGEVVYDGPASGLTPDVLTSIYGEE
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: LSGGQRQRVGIARA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: AGDIVGLIGPSGAGKSTLIRCVNRLVPPTGGSIRLGDTELTRLGGADLRRARRRIGMIFQEFALIERLTVMENVLSGRLGYVGFWASWFRRFPQADVQRAFALLARVGLSDQVDKRADALSGGQRQRVGIARALAQDPELLLIDEPTASLDPKTSRQVMRLITELCAERRLAAIVNIHDVALAQMFLPRIVGLRAGEVVYDGPA
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain
Protein sequence:
MADAFDPSDTRPDELAAVARQKLLVVLGQLQTYIFQVELLKRCDPQVARHQIGKLKLNALQVRAVSRHFMEGMSSQAATLITPLTLALELSLEYARREGEKLLEALNDLGERSSPVAYFEGTMGLARGCPHHQAVKLATYGGEIDKELCFLHDVENFLKQMNYCHLITPASAAAEALVSVKAFLARTVGSELIVPPEISDPSHPCHVCFEELCVTANQGATASRRLAGKICDHVTQQARVRLDADEMRRNLPHVVGLSEARRARALHALEVSSKMTEANSGGPAEAPGPAAAQEREASALLDAHHVFKSAPPGLYAVSELRFWLSSGDRTSGSTVDAFADNLSALAERERRYETGAVAVELAAFGRRGEHFDRTFGDRVASLDMVDALFVGGQSAAPDDQIEALVRACYNHHLSAPVLRQLAGSEHGDAEALRSALEGLHAAEDPPGDGNAEKEARRAPSLGGGPEDDWAALAARAAADVGARRRLYADRLTKRSLASLGRCVREQRGELEKMLRVSTYGEVLPTVFAAVCNGFAARTRFCELTARAGTVIDNRGNPDTFDTHRFMRASLMRHRVDPALLPGITHQFFELVNGPLFDHATHGFAQPPNTALYFSVENVGLLPHLKEELARFMMGKADSDWAISEFQKFYHFDGTSGITPTQRIA

Annotated regions:
Protein sequence:
MPELPEVETTKQGIKPHLEGRIITTAQVRNRKLRLPVPLNLNELCEGKHITAITRRGKYILLHMDKGYILIHLGMSGHLRIVSQTANPQKHDHVDLHINNGLALRFCDPRRFGLFIYIDENPYQHPLLAHLGPEPLSDDFNSEYLLRKAANKSQSIKSFIMDSQIVVGIGNIYAAESLFLAKIHPNTSAKKITTEEFNSLTGHIKKILESAIEAGGTTLRDFYSSDGKPGYFRFALKVYGRKNLPCLVCENKIETVVIAGRHSAFCPHCQPIIT

Annotated regions:
phrase: LGPEPLSDDFNSEYLLRKAANKSQSIKSFIMDSQIVVGIGNIYAAESLFLAKIHPNTSAKKITTEEFNSLTGHIKKILESAIEAGGTTLRDF
type: DOMAIN
name: DNA_glyclase/AP_lyase_DNA-bd
description: DNA glycosylase/AP lyase, H2TH DNA-binding

phrase: LPCLVCENKIETVVIAGRHSAFCPHCQ
type: DOMAIN
name: Znf_FPG/IleRS
description: Zinc finger, FPG/IleRS-type

phrase: MPELPEVETTKQGIKPHLEGRIITTAQVRNRKLRLPVPLNLNELCEGKHITAITRRGKYILLHMDKGYILIHLGMSGHLRIVSQTANPQKHDHVDLHINNGLALRFCDPRRF
type: DOMAIN
name: FPG_cat
description: Formamidopyrimidine-DNA glycosylase, catalytic domain

phrase: KVYGRKNLPCLVCENKIETVVIAGRHSAFCPHCQ
type: DOMAIN
name: Znf_DNA_glyclase/AP_lyase
description: Zinc finger, DNA glycosylase/AP lyase-type

phrase: LGPEPLSDDFNSEYLLRKAANKSQSIKSFIMDSQIVVGIGNIYAAESLFLAKIHPNTSAKKITTEEFNSLTGHIKKILESAIEAGGTTLR
type: DOMAIN
name: DNA_glyclase/AP_lyase_DNA-bd
description: DNA glycosylase/AP lyase, H2TH DNA-binding

phrase: PELPEVETTKQGIKPHLEGRIITTAQVRNRKLRLPVPLNLNELCEGKHITAITRRGKYILLHMDKGYILIHLGMSGHLRIVSQTANPQKHDHVDLHINNGLALRFCDPRRF
type: DOMAIN
name: FPG_cat
description: Formamidopyrimidine-DNA glycosylase, catalytic domain

phrase: PELPEVETTKQGIKPHLEGRIITTAQVRNRKLRLPVPLNLNELCEGKHITAITRRGKYILLHMDKGYILIHLGMSGHLRIVSQTANPQKHDHVDLHINNGLALRFCDPRRFGLF
type: DOMAIN
name: FPG_cat
description: Formamidopyrimidine-DNA glycosylase, catalytic domain
Protein sequence:
MAKPILRIGSRKNTRSGSRKNVRRIPKGIIHVQASFNNTIVTVTDVRGRVISWSSAGTCGFRGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVRIKGPGLGRDAALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRRV

Annotated regions:
phrase: LRAIRRSGILLSFVRDVTPMPH
type: CONSERVED_SITE
name: Ribosomal_uS11_CS
description: Small ribosomal subunit protein uS11, conserved site
Protein sequence:
MARSLKKNPFVADNLFKKIDKLNIKAEKEIIITWSRGSTIIPIMVGHTIAIHTGKEHLPIYIMDHMVGHKLGEFASTFNFRGHAKSDNRSRR

Annotated regions:
phrase: TGKEHLPIYIMDHMVGHKLGEFAS
type: CONSERVED_SITE
name: Ribosomal_uS19_CS
description: Small ribosomal subunit protein uS19, conserved site
Protein sequence:
MDALEEESFALSFSSTSDAEFDAVVGYLEDIIMDDEFQLLQRNFMDKYYLEFEDTEENKLIYTPIFNEYISLVEKYIEEQLLQRIPGFNMAAFTTTLQHHKDEVAGDIFDMLLTFTDFLAFKEMFLDYRAEKEGRGLDLSSGLVVTSLCKSSSLPASQNNLRH

Annotated regions:
phrase: EFDAVVGYLEDIIMDDEFQLLQRNFMDKYYLEFEDTEENKLIYTPIFNEYISLVEKYIEEQLLQRIPGFNMAAFTTTLQHHKDEVAGDIFDMLLTFTDFLAFKEMFLDYRAEKE
type: DOMAIN
name: BART_dom
description: BART domain
Protein sequence:
MTRIVFMGTPDFSVPVLGTLIDDGYEVVGVVTQPDRPKGRKKVMTPPPVKEEALRRGIPVLQPEKVREEAETDKILALEPDLIVTAAFGQILPKKLLDYPKYGCINVHASLLPELRGGAPIHYAILEGKEKTGVTIMYMVEKLDAGDMLAKVEVDIEETDNVGTLHDKLSKAGAALLSETVPRIIDGSVTPEKQDEQKATYAPNIKREQELIDWSKPGEVLYNQVRGLNPWPVAYTVLNGQTLKVWAAKKCQALKQAEPGEIVTVEKDGIVVATGNDTALKLTEVQPAGKKRMKAEDFVRGAGLQAGMKLGHDDEK

Annotated regions:
phrase: RIVFMGTPDFSVPVLGTLIDDGYEVVGVVTQPDRPKGRKKVMTPPPVKEEALRRGIPVLQPEKVREEAETDKILALEPDLIVTAAFGQILPKKLLDYPKYGCINVHASLLPELRGGAPIHYAILEGKEKTGVTIMYMVEKLDAGDMLAKVEVDIEETDNVGTLHDKLSKAGAALLSE
type: DOMAIN
name: Formyl_transf_N
description: Formyl transferase, N-terminal

phrase: RIVFMGTPDFSVPVLGTLIDDGYEVVGVVTQPDRPKGRKKVMTPPPVKEEALRRGIPVLQPEKVREEAETDKILALEPDLIVTAAFGQILPKKLLDYPKYGCINVHASLLPELRGGAPIHYAILEGKEKTGVTIMYMVEKLDAGDMLAKVEVDIEETDNVGTLHDKLSKAGAALLSETVPRIIDGSVTPEKQDEQKATYAPN
type: DOMAIN
name: Met-tRNA-FMT_N
description: Methionyl-tRNA formyltransferase, N-terminal domain

phrase: EQELIDWSKPGEVLYNQVRGLNPWPVAYTVLNGQTLKVWAAKKCQALKQAEPGEIVTVEKDGIVVATGNDTALKLTEVQPAGKKRMK
type: DOMAIN
name: Met-tRNA-FMT_C
description: Methionyl-tRNA formyltransferase, C-terminal domain

phrase: GVTIMYMVEKLDAGDMLAKVEVD
type: ACTIVE_SITE
name: GART_AS
description: Phosphoribosylglycinamide formyltransferase, active site

phrase: NIKREQELIDWSKPGEVLYNQVRGLNPWPVAYTVLNGQTLKVWAAKKCQALKQAEPGEIVTVEKDGIVVATGNDTALKLTEVQPAGKKRMKAEDFVRG
type: DOMAIN
name: Formyl_trans_C
description: Formyl transferase, C-terminal
Protein sequence:
MTTTTEFPSATAKARFVRVSPTKARRVIDLVRGKSVNDAIDILRWAPQAASEPVAKVIASAAANAQNNDGLDPSTLVVSEIFADEGPTAKRIRPRAQGRAFRIRKRTSHITVVVESRPKQEKGGKAGASKASSRAARAQGSKAAAAKKTESKGGTS

Annotated regions:
phrase: KRIRPRAQGRAFRIRKRTSHITVV
type: CONSERVED_SITE
name: Ribosomal_uL22_CS
description: Large ribosomal subunit protein uL22, conserved site
Protein sequence:
MIQIDALPAFSDNYIWLLQDTAKRRCAVVDPGDAGPVERWLAANPEWVLSDILVTHHHNDHVGGVERLRQLTGARVCGPANERIPGRDLALDEGDRVDVLGVTFQVLAVPGHTLGHIAFFSDQPATPILFSGDTLFAAGCGRMFEGTPEQMQPALARLAALPEQTAVYCAHEYTLSNLRFAKAVEPTNPHVQQRFEDVSRLRAENRISLPSTIGLERLTNPFLRTSETLVKQKADEWKGHSNTTHVAVFAALRSWKDTF

Annotated regions:
phrase: ALPAFSDNYIWLLQDTAKRRCAVVDPGDAGPVERWLAANPEWVLSDILVTHHHNDHVGGVERLRQLTGARVCGPANERIPGRDLALDEGDRVDVLGVTFQVLAVPGHTLGHIAFFSDQPATPILFSGDTLFAAGCGRMFEGTPEQMQPALARLAALPEQTAVYCA
type: DOMAIN
name: Clx_II_MBL
description: Hydroxyacylglutathione hydrolase, MBL domain

phrase: EYTLSNLRFAKAVEPTNPHVQQRFEDVSRLRAENRISLPSTIGLERLTNPFLRTSETLVKQKADEWKGHSNTTHVAVFAALRSWKDT
type: DOMAIN
name: HAGH_C
description: Hydroxyacylglutathione hydrolase, C-terminal domain

phrase: DNYIWLLQDTAKRRCAVVDPGDAGPVERWLAANPEWVLSDILVTHHHNDHVGGVERLRQLTGARVCGPANERIPGRDLALDEGDRVDVLGVTFQVLAVPGHTLGHIAFFSDQPATPILFSGDTLFAAGCGRMFEGTPEQMQPALARLAALPEQTAVYCA
type: DOMAIN
name: Metallo-B-lactamas
description: Metallo-beta-lactamase

phrase: YIWLLQDTAKRRCAVVDPGDAGPVERWLAANPEWVLSDILVTHHHNDHVGGVERLRQLTGARVCGPANERIPGRDLALDEGDRVDVLGVTFQVLAVPGHTLGHIAFFSDQPATPILFSGDTLFAAGCGRMFEGTPEQMQPALARLAALPEQTAVYCA
type: DOMAIN
name: Metallo-B-lactamas
description: Metallo-beta-lactamase
Protein sequence:
MNSQIKNKAVYWGTGRRKTSVARVRLIPGNGLIKINGRAGDDYLNFNPLHLNSIKAPLQTLGLENSYDMYVNVFGGGLTGQADAIKQGAARALCELSPDNRKPLKTEGHLSRDPRAKERRKYGLKKARKAPQFSKR

Annotated regions:
phrase: GGGLTGQADAIKQGAARA
type: CONSERVED_SITE
name: Ribosomal_uS9_CS
description: Small ribosomal subunit protein uS9, conserved site
Protein sequence:
MRVMGIRKNYQHLWIGGIMLLGILMICSATNNLWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEIELKNVTENFNMWKNNMVEQMQEDIISLWDQSLKPCVKLTPLCVTMNCTDXXXXXXXXXXXXXXXXXXXXXXXXXXNITTNLRDKMQKEYALFYKXDVVKIGNDSTSYRLISCNTSVITQACPKISFEPIPIHYCAPAGFAILKCNDKKFNGTGPCXNVSSVQCTHGIRPVVSTQLLLNGSLAEEEVVVRSANFTNNAKIIIVQLNESXPITCVRPNNNTRKSINMGQGRAWYATGEIIGDIRKAYCNINRTQWNNTLNQIAEKLREQFKNKTIVFNHSSGGDPEIVMHSFNCRGEFFYCNTXXXXXXQLFNSTWYPNGTYMGGSSNITNGNLPCRIKQIINMWQEVGKAMYAPPIAGLINCTSNITGLLLTRDGGNSTBXSDXEIFXRPXGGDMRDNWRSELYKYKVIKIEPLGIAPSKAKRRVVQREKRAVGLGAMFLGFLGAAGSTMGAASLTLTVQARQLLSGIVQQQNNLLRAIEAQQHMLQLTVWXIKQLRARVLALERYLKDQQLLGIWGCSGKLICTTTVPWNTSWSNRSLEDIRDNMTWMQWEREIDNYTGIIYSLIEESQIQQXKNEQELLEWDKWASLWNWFDITKWLWYIKIFIMIVGGLIGLRIVFAVFSIVNRVRQGYSPLSLQTLLPIPRGPDRPEGTEEEGGERDREGSRRLVDGFLALIWDDLRSLCLF

Annotated regions:
phrase: VQARQLLSGIVQQQNNLLRAIEAQQHMLQLTVWXIKQLRARVLALERYLKDQQLLGIWGCSGKLICTTTVPWNTSWSNRSLEDIRDNMTWMQWEREIDNYTGIIYSLIEESQIQQXKNEQELLEWD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASLTLTVQARQLLSGIVQQQNNLLRAIEAQQHMLQLTVWXIKQLRARVLALERYLKDQQLLGIWGCSGKLICTTTVPWNTSWSNRSLEDIRDNMTWMQWEREIDNYTGIIYSLIEESQIQQXKNEQELLEWDKWASLWNWFDITKWLWYIKIFIMIVGGLIGLRIVFAVFSIVNRVRQGYSPLSLQ
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: XNITTNLRDKMQKEYALFYKXDVVKIGNDSTSYRLISCNTSVITQACPKISFEPIPIHYCAPAGFAILKCNDKKFNGTGPCXNVSSVQCTHGIRPVVSTQLLLNGSLAEEEVVVRSANFTNNAKIIIVQLNESXPITCVRPNNNTRKSINMGQGRAWYATGEIIGDIRKAYCNINRTQWNNTLNQIAEKLREQFKNKTIVFNHSSGGDPEIVMHSFNCRGEFFYCNTXXXXXXQLFNSTWYPNGTYMGGSSNITNGNLPCRIKQIINMWQEVGKAMYAPPIAGLINCTSNITGLLLTRDGGNSTBXSDXEIFXRPXGGDMRDNWRSELYKYKVIKIEPLGIAPSKAKRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: LWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEIELKNVTENFNMWKNNMVEQMQEDIISLWDQSLKPCVKLTPLCVTMNCTD
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MNITNCTTEASMAIRPKTITEKMLICMTLVVITTLTTLLNLAVIMAIGTTKKLHQPANYLICSLAVTDLLVAVLVMPLSIIYIVMDRWKLGYFLCEVWLSVDMTCCTCSILHLCVIALDRYWAITNAIEYARKRTAKRAALMILTVWTISIFISMPPLFWRSHRRLSPPPSQCTIQHDHVIYTIYSTLGAFYIPLTLILILYYRIYHAAKSLYQKRGSSRHLSNRSTDSQNSFASCKLTQTFCVSDFSTSDPTTEFEKFHASIRIPPFDNDLDHPGERQQISSTRERKAARILGLILGAFILSWLPFFIKELIVGLSIYTVSSEVADFLTWLGYVNSLINPLLYTSFNEDFKLAFKKLIRCREHT

Annotated regions:
phrase: LNLAVIMAIGTTKKLHQPANYLICSLAVTDLLVAVLVMPLSIIYIVMDRWKLGYFLCEVWLSVDMTCCTCSILHLCVIALDRYWAITNAIEYARKRTAKRAALMILTVWTISIFISMPPLFWRSHRRLSPPPSQCTIQHDHVIYTIYSTLGAFYIPLTLILILYYRIYHAAKSLYQKRGSSRHLSNRSTDSQNSFASCKLTQTFCVSDFSTSDPTTEFEKFHASIRIPPFDNDLDHPGERQQISSTRERKAARILGLILGAFILSWLPFFIKELIVGLSIYTVSSEVADFLTWLGYVNSLINPLL
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM
Protein sequence:
MQRLAKLISNAGICSRRDAEKLILDGQVKVNGIIVTSPATNVDTDNQVEVSGSLITSSQKSRLWIYYKPVGLITTHKDPLSRKTVFEQLTGLPRVISIGRLDLNSEGLLLLTNNGDLARQFELPSSKLKRVYHVRAYGNPDPLLKSNYKNLEIDGIFYNPQSIKLLRKNSTNSWLEVILFEGKNREIRRIFEHFGLKVNKLIRTEYGDFKLDNLKPNEYREVTKKLYKC

Annotated regions:
phrase: QRLAKLISNAGICSRRDAEKLILDGQVKVNGIIVTSPATNVDTDNQVEVSGSLITSSQKSRLWIYYK
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: LWIYYKPVGLITTHKDPLSRKTVFEQLTGLPRVISIGRLDLNSEGLLLLTNNGDLARQFELPSSKLKRVYHVRAYGNPDPLLKSNYKNLEIDGIFYNPQSIKLLRKNSTNSWLEVILFEGKNREIRRIFE
type: DOMAIN
name: PsdUridine_synth_RsuA/RluA
description: Pseudouridine synthase, RsuA/RluA-like

phrase: QRLAKLISNAGICSRRDAEKLILDGQVKVNGIIVTSPATNVDTDN
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: GRLDLNSEGLLLLT
type: CONSERVED_SITE
name: PsdUridine_synth_RsuA/RluB_CS
description: Pseudouridine synthase, RsuA/RluB/E/F, conserved site
Protein sequence:
MKKHPSSPAACPCGKPRAYPDCCGRWHAGALFLQAPDAESLMRSRYSAFVLDQLDYLLQTWHPDTRPSELEPNAADVKWLGLQIKASQQQDDTHATVEFVARLRQAGRATRLHELSRFVKEEQRWYYVDGDIR

Annotated regions:
phrase: DAESLMRSRYSAFVLDQLDYLLQTWHPDTRPSELEPNAADVKWLGLQIKASQQQDDTHATVEFVARLRQAGRATRLHELSRFVKEEQRWYYVD
type: DOMAIN
name: YchJ-like_M
description: YchJ-like, middle NTF2-like domain
Protein sequence:
METVILFPAIDLKSGQCVRLEQGDMARATVFNLDPVEQARAFAAQGFEYLHVVDLDGAFAGKPVNADAVERVLRNVALPMQLGGGIRDLKTVEAWLGKGVARVIIGTAAVRDPVLVREAAKAFPGRVAVGLDARDGKVAVEGWAETSEVTALDIARRFEDAGIAAIIFTDIARDGLLKGLNLDATIALADSISIPVIASGGFASIADVKALLEPRAKKLAGAISGRALYDGRLDPVEALKLIHAARAAA

Annotated regions:
Protein sequence:
MEIWYAEIINIGNEILTGRTINTNASHIARRLTSLGYTVRRITVVRDEIEEIVSAFREAINRRPRIIISTGGLGPTYDDKTNEGLAKALNIELELNEIAYKMLLEKYSKLNIEITEERKKMAIMPKGSIPVENNAGVAPGILIVYQGITILATPGVPKEMEDVLENFIKKYLKDRPSVKYLETSFLLEGVMESTIAPYVKQLVKKYDLYIKTHPKGQELSKPILEIQIAGSSENEAEIKERIQKALEELKEIGVKLGGTIIQS

Annotated regions:
phrase: AEIINIGNEILTGRTINTNASHIARRLTSLGYTVRRITVVRDEIEEIVSAFREAINRRPRIIISTGGLGPTYDDKTNEGLAKALNIELELNEIAYKMLLEKYSKLNIEITEERKKMAIMPKGSIPVENNAGVAPGILIVYQGITILATPGVPKEMEDVLENFIKKYLKD
type: DOMAIN
name: MoaB/Mog_dom
description: MoaB/Mog domain

phrase: EIINIGNEILTGRTINTNASHIARRLTSLGYTVRRITVVRDEIEEIVSAFREAINRRPRIIISTGGLGPTYDDKTNEGLAKALNIELELNEIAYKMLLEKYSKLNIEITEERKKMAIMPKGSIPVENNAGVAPGILIVYQGITILATPGVPKEMEDVLENFIKKYL
type: DOMAIN
name: MoaB/Mog_dom
description: MoaB/Mog domain

phrase: EIINIGNEILTGRTINTNASHIARRLTSLGYTVRRITVVRDEIEEIVSAFREAINRRPRIIISTGGLGPTYDDKTNEGLAKALNIELELNEIAYKMLLEKYSKLNIEITEERKKMAIMPKGSIPVENNAGVAPGILIVYQGITILATPGVPKEMEDVLENFIKKYLKD
type: DOMAIN
name: MoaB/Mog_dom
description: MoaB/Mog domain
Protein sequence:
MSIKKTKPITSSQRFKVINTFKEITKKNPEKTLSIGKKKTGGRNNSGKITIRYLGGGHKKKYRIIDYKRNKFGIPAIIKHIEYDPNRSCLIYLLFYIDGEKRYIPSINGLNIGNKILSDKKTTTELGNAMYIMNIPLGTIISCVELIPGKGAILARSAGSYAQLIAKSKKFATIKLPSGEKRMVLSTCMATIGSIYNSDHKLEMDGKAGRKRWLGRKPRTRGVAMNPVDHPMGGGEGKSSGGHPRNRNGIPSNGFKTRNKKKITNKYIIKK

Annotated regions:
phrase: GRNNSGKITIRYLGGGHKKKYRIIDYKRNKFGIPAIIKHIEYDPNRSCLIYLLFYIDGEKRYIPSINGLNIGNKI
type: DOMAIN
name: Ribosomal_uL2_RNA-bd_dom
description: Large ribosomal subunit protein uL2, RNA-binding domain

phrase: TELGNAMYIMNIPLGTIISCVELIPGKGAILARSAGSYAQLIAKSKKFATIKLPSGEKRMVLSTCMATIGSIYNSDHKLEMDGKAGRKRWLGRKPRTRGVAMNPVDHPMGGGEGKSSGGHPRNRNGI
type: DOMAIN
name: Ribosomal_uL2_C
description: Large ribosomal subunit protein uL2, C-terminal

phrase: PRTRGVAMNPV
type: CONSERVED_SITE
name: Ribosomal_uL2_CS
description: Large ribosomal subunit protein uL2, conserved site

phrase: LGNAMYIMNIPLGTIISCVELIPGKGAILARSAGSYAQLIAKSKKFATIKLPSGEKRMVLSTCMATIGSIYNSDHKLEMDGKAGRKRWLGRKPRTRGVAMNPVDHPMGGGEGKSSGGHPR
type: DOMAIN
name: Ribosomal_uL2_C
description: Large ribosomal subunit protein uL2, C-terminal
Protein sequence:
MLDSGGPPASARRLHPPEYSAAARASAHARRAASWAWGQGCLGGRGRGAGRPPPGAAVRRGAVTRRRALRSAGIRSVEFWVWVSSLDTGVPGPSVVALHKSSSGRRTPVELTLLMSLLKMNEKKLERTPQPRKLPEWMSMQNETCTAVETKASIQKSVFEDDLSFLEFTGSIVYSYEASDCSFLSEDISMNLSTGGVVGFDMEWPPVYTKRKPSRVALIQLCVSENKCYLFHISSMSVFPQGLKMLLENEAIKKAGVGIKGDQRKLLCDFDIDLKNFVELTDVANEKLKCTETWSLNGLVKHLFGKQLLKDRSIRCSNWGDFPLTEDQKLYAATDAYAGLIIYQKLEILGNAVERFAINKKEEEILPIDVKKQLTSISEEMMDLAKHLPDALKKLEDPQRVSLLLSAISENLHSLRKMIIGSPEAELRHSTNVHLLSLGDPTADEVQQKQIREHKFFPKVKDETWDTTFDNLIKHDEGTEPQNKVKQKEDGLEDGLEVGNKLKTNTERICLMSLDITEHELQILEQQAQEKFLNDVTCKSPEHLSSKDNEEDLSYVIESDEDLEKEMIKSLENLNTGMADPIHSKCIKMEGNLDVPFEDDEDEIEAIEEEDDNVEDYSLPRPNARQINFLKIYFGHSSFKPVQWKVIHSVLEERRDNVVVMATGYGKSLCFQYPPVYSGRIGLVISPLISLMEDQVLQLKMSNIPACFLGSAQSKNVLEDIKLGKYRIVYITPEFCSGNLFLLQQLQADIGITLIAVDEAHCISEWGH

Annotated regions:
phrase: YEASDCSFLSEDISMNLSTGGVVGFDMEWPPVYTKRKPSRVALIQLCVSENKCYLFHISSMSVFPQGLKMLLENEAIKKAGVGIKGDQRKLLCDFDIDLKNFVELTDVANEKLKCTETWSLNGLVKHLFGKQLLKDRSIRCSNWGDFPLTEDQKLYAATDAYAGLIIYQKL
type: DOMAIN
name: 3'-5'_exonuclease_dom
description: 3'-5' exonuclease domain

phrase: IVYSYEASDCSFLSEDISMNLSTGGVVGFDMEWPPVYTKRKPSRVALIQLCVSENKCYLFHISSMSVFPQGLKMLLENEAIKKAGVGIKGDQRKLLCDFDIDLKNFVELTDVANEKLKCTETWSLNGLVKHLFGKQLLKDRSIRCSNWGDFPLTEDQKLYAATDAYAGLIIYQKLEILG
type: DOMAIN
name: 3'-5'_exonuclease_dom
description: 3'-5' exonuclease domain

phrase: PVQWKVIHSVLEERRDNVVVMATGYGKSLCFQYPPVYSGRIGLVISPLISLMEDQVLQLKMSNIPACFLGSAQSKNVLEDIKLGKYRIVYITPEFCSGNLFLLQQLQADIGITLIAVDEAHCISEW
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: HSVLEERRDNVVVMATGYGKSLCFQYPPVYSGRIGLVISPLISLMEDQVLQLKMSNIPACFLGSAQSKNVLEDIKLGKYRIVYITPEFCSGNLFLLQQLQADIGITLIAVDEAHCISEWG
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: GHSSFKPVQWKVIHSVLEERRDNVVVMATGYGKSLCFQYPPVYSGRIGLVISPLISLMEDQVLQLKMSNIPACFLGSAQSKNVLEDIKLGKYRIVYITPEFCSGNLFLLQQLQADIGITLIAVDEAHCISEWG
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain
Protein sequence:
MKPVIALVGRPNVGKSTLFNRMTRSRDALVADLPGLTRDRHYGEGRIGERPFIAIDTGGFEPVVKEGIVAEMAKQTKQAVVEADVVIFIVDGRLGLAPQDRAIADYLRKTGRRIMLAVNKAEGMKYTSVAADFYELGMGDPYAISAAHGDGVRELVDEAIELAVQERPELAEEASDEGKGVKIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTTRDAIYVEFERGGKPYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSIADANVVILLLDAQQDISDQDAHIAGFIVESGRALVVGVNKWDGLDGHTRDRIKHDLERKLQFLSFANFHFVSARERTGIGALMRSVDDAYAAAMVKLPTPQLTRVLQEAVEFQQPKRVGASRPKLRYAHQGGSNPPIIVIHGNALSGVAETYRRYLENRFRAAFKLKGTPLRIEFRTNKNPYADSKD

Annotated regions:
phrase: MKPVIALVGRPNVGKSTLFNRMTRSRDALVADLPGLTRDRHYGEGRIGERPFIAIDTGGFEPVVKEGIVAEMAKQTKQAVVEADVVIFIVDGRLGLAPQDRAIADYLRKTGRRIMLAVNKAEGMKYTSVAADFYELGMGDPYAISAAHGDGVRELVDEAIELAVQ
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: KGVKIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTTRDAIYVEFERGGKPYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSIADANVVILLLDAQQDISDQDAHIAGFIVESGRALVVGVNKWDGLDGHTRDRIKHDLERKLQ
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: KLPTPQLTRVLQEAVEFQQPKRVGASRPKLRYAHQGGSNPPIIVIHGNALSGVAETYRRYLENRFRAAFKLKGTPLRIEF
type: DOMAIN
name: KH_dom-like
description: GTPase Der, C-terminal KH-domain-like

phrase: VIALVGRPNVGKSTLFNRMTRSRDALVADLPGLTRDRHYGEGRIGERPFIAIDTGGFEPVVKEGIVAEMAKQTKQAVVEADVVIFIVDGRLGLAPQDRAIADYLRKTGRRIMLAVNKAEGMKYTSVAADFYELGMGDPYAISAAHGDGVRELV
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: KGVKIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTTRDAIYVEFERGGKPYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSIADANVVILLLDAQQDISDQDAHIAGFIVESGRALVVGVNKWDGLDGHTRDRIKHDLERKLQFLSFANFHFVSARERTGIGA
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: IALVGRPNVGKSTLFNRMTRSRDALVADLPGLTRDRHYGEGRIGERPFIAIDTGGFEPVVKEGIVAEMAKQTKQAVVEADVVIFIVDGRLGLAPQDRAIADYLRKTGRRIMLAVN
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: KIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTTRDAIYVEFERGGKPYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSIADANVVILLLDAQQDISDQDAHIAGFIVESGRALVVGVN
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: PVIALVGRPNVGKSTLFNRMTRSRDALVADLPGLTRDRHYGEGRIGERPFIAIDTGGFEPVVKEGIVAEMAKQTKQAVVEADVVIFIVDGRLGLAPQDRAIADYLRKTGRRIMLAVNKAEGMKYTSVAADFYELGMGDPYAISAAHGDGVRELVDEAIELAVQE
type: DOMAIN
name: G_ENGA
description: EngA-type guanine nucleotide-binding (G) domain

phrase: VKIAIVGRPNVGKSTLVNTLIGEERVIAFDMPGTTRDAIYVEFERGGKPYTLIDTAGLRRRGKVFEAIEKFSVVKTLQSIADANVVILLLDAQQDISDQDAHIAGFIVESGRALVVGVNKWDGLDGHTRDRIKHDLERKLQFLSFANFHFVSARERTGIGALMRSVDDAYAAA
type: DOMAIN
name: G_ENGA
description: EngA-type guanine nucleotide-binding (G) domain

phrase: IALVGRPNVGKSTLFNRMTR
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: AKQTKQAVVEADVVIFIV
type: DOMAIN
name: GTP-bd
description: GTP binding domain
Protein sequence:
GGSCGQCRVKVKSGGGDILPTELDHISKGEAREGERLSCQVSVKVDMDIELPEEIFGVKKWECEVISNDNKATFIKELKMAIPNGEVVPFRAGGYIQIEAPAHHVKYSDYDIPEEYRGDWQHFGFFDVESKVDEDTIRAYSMANCPEEAGIIMLNVRIATPPPRDLSLPAGKMSSYIFSLKAGDKVTISGPFGEFFAKETDNEMVFVGGGAGMAPMRSHIFDQLNRLDTKRKVSFWYGARSKREMFYVEDFDMLAKENENFEWHVALSDPQPEDNWEGYTGFIHNVILENYLGNHEAPEDCEY

Annotated regions:
phrase: FVGGGAGMAPMRSHIFDQLNRLDTKRKVSFWYGARSKREMFYVEDFDMLAKENENFEWHVALSDPQPEDNWEGYTGFIHNVILENYL
type: DOMAIN
name: OxRdtase_FAD/NAD-bd
description: Oxidoreductase FAD/NAD(P)-binding

phrase: VKKWECEVISNDNKATFIKELKMAIPNGEVVPFRAGGYIQIEAPAHHVKYSDYDIPEEYRGDWQHFGFFDVESKVDEDTIRAYSMANCPEEAGIIMLNVRIATPPPRDLSLPAGKMSSYIFSLKAGDKVTISGPFGEFFA
type: DOMAIN
name: FAD-bd_FR_type
description: FAD-binding domain, ferredoxin reductase-type

phrase: GGSCGQCRVKVKSGGGDILPTELDHISKGEAREGERLSCQVSVKVDMDI
type: DOMAIN
name: 2Fe-2S_ferredoxin-type
description: 2Fe-2S ferredoxin-type iron-sulfur binding domain

phrase: SKVDEDTIRAYSMANCPEEAGIIMLNVRIATPPPRDLSLPAGKMSSYIFSLKAGDKVTISGPFGE
type: DOMAIN
name: Cbr1-like_FAD-bd_dom
description: Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain

phrase: GGSCGQCRVKVKSGGGDILPTELDHISKGEAREGERLSCQVSVKVDMDIELPEE
type: DOMAIN
name: 2Fe-2S_ferredoxin-type
description: 2Fe-2S ferredoxin-type iron-sulfur binding domain
Protein sequence:
MAAIKPIKTYKGKIVPLFNDNIDTDQIIPKVHLKRISKSGFGPFAFDEWRYLPDGSDNPDFNPNKPQYKGASILITGDNFGCGSSREHAAWALKDYGFHIIIAGSFSDIFYMNCTKNAMLPIVLEKNAREHLAKYVEIEVDLPNQTVSSPDKSFHFEIDETWKNKLVNGLDDIAITLQYESLIEKYEKSL

Annotated regions:
phrase: LFNDNIDTDQIIPKVHLKRISKSGFGPFAFDEWRYLPDGSDNPDFNPNKPQYKGASILITGDNFGCGSSREHAAWALKDYGFHIIIAGSFSDIFYMNCTKNAMLPIVLEKNAREHLAKYVEIEVD
type: DOMAIN
name: IPMI_Swivel
description: 3-isopropylmalate dehydratase, swivel domain

phrase: IKTYKGKIVPLFNDNIDTDQIIPKVHLKRISKSGFGPFAFDEWRYLPDGSDNPDFNPNKPQYKGASILITGDNFGCGSSREHAAWALKDYGFHIIIAGSFSDIFYMNCTKNAMLPIVLE
type: DOMAIN
name: AconitaseA/IPMdHydase_ssu_swvl
description: Aconitase A/isopropylmalate dehydratase small subunit, swivel domain