nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MLTKSKQDPHLNHILNARHHDPFSYLGLHQDGTQYILRLFQPFAARAWLQTASGWVPLQRSHEAGLFEWKGNTPPPVPCRIRLEENGHSWETYDAYTFWTTLSPEELYLFGEGRLKQAYRTFGAHLCEQQGVAGVRFVVWAPNAERVSVIGNFNHWDGRMHQMRVHGSSGVWEIFIPGLTSSDLYKFEIRNRQTGQILVKTDPYGFSFEQRPGTAARVTAHGHYAWQDAEWLEDRARADWLHAPFNCYEVHLGSWRRDAHGEFLGYRELAHQLVPYMQEMGYTHIELLPVSEHPLNESWGYQTTGYFAPTNRFGSPDDLRYFVDQCHQAGIGVILDWVPGHFPKDDWALARFDGSALFEHEDPRLGEHQDWGTYIFNYGRNEVRNFLLASAHYWLEEFHMDGLRVDAVASMLYLDYSRKEGEWLPNRHGGRENLEAIDFLKQLNVMVHEDFPGALTIAEESTSWPMVSRPVYLGGLGFSMKWNMGWMNDTLSYMQHDPIHRRFHHDKLTFGQIYAYSENFVLPFSHDEVVHGKRSLLDKMPGDTWQKFANLRLLATYQMTASGKKLNFMGNELAQGREWNVNSSLDWHLLDLHWHQGIQRLHRDLSHLYRQVPALHELDFDAHGFEWIDCSDSDQSIINYLRRARDGSFVLVLLNFTPVLRSGYRVGTPLAGHYREIFNSDAGYYGGSNQGNGNGLQTEAYPWMGHSHSLVVTIPPLGGVIIQPG

Annotated regions:
phrase: HLNHILNARHHDPFSYLGLHQDGTQYILRLFQPFAARAWLQTASGWVPLQRSHEAGLFEWKGNTPPPVPCRIRLEENGHSWETYDA
type: DOMAIN
name: GlgB_N
description: 1,4-alpha-glucan branching enzyme GlgB, N-terminal domain

phrase: QAYRTFGAHLCEQQGVAGVRFVVWAPNAERVSVIGNFNHWDGRMHQMRVHGSSGVWEIFIPGLTSSDLYKFEIRNRQTGQILVKTDPYGFSFEQRPGTAARV
type: DOMAIN
name: GlgB_N_E_set_prok
description: Glycogen branching enzyme GlgB, N-terminal Early set domain

phrase: EVHLGSWRRDAHGEFLGYRELAHQLVPYMQEMGYTHIELLPVSEHPLNESWGYQTTGYFAPTNRFGSPDDLRYFVDQCHQAGIGVILDWVPGHFPKDDWALARFDGSALFEHEDPRLGEHQDWGTYIFNYGRNEVRNFLLASAHYWLEEFHMDGLRVDAVASMLYLDYSRKEGEWLPNRHGGRENLEAIDFLKQLNVMVHEDFPGALTIAEESTSWPMVSRPVYLGGLGFSMKWNMGWMNDTLSYMQHDPIHRRFHHDKLTFGQIYAYSENFVLPFSHDEVVHGKRSLLDKMPGDTWQKFANLRLLATYQMTASGKKLNFMGNELAQGREWNVNSSLDWHLLDL
type: DOMAIN
name: Glyco_hydro_13_cat_dom
description: Glycosyl hydrolase, family 13, catalytic domain

phrase: VPYMQEMGYTHIELLPVSEHPLNESWGYQTTGYFAPTNRFGSPDDLRYFVDQCHQAGIGVILDWVPGHFP
type: DOMAIN
name: Glyco_hydro_13_cat_dom
description: Glycosyl hydrolase, family 13, catalytic domain

phrase: FNYGRNEVRNFLLASAHYWLEEFHMDGLRVDAVASMLYLDYSRKEGEWLPNRHGGRENLEAIDFLKQLNVMVHEDFPGALTIAEESTSWPMVSRPVYLGGLGFSMKWNMGWMNDTLSYMQHDPIHRRFHHDKLTFGQIYAYSENFVLPFSHDEVVHGKRSLLDKMPGDTWQKFANLRLLATYQMTASGKKLNFMGNELA
type: DOMAIN
name: Glyco_hydro_13_cat_dom
description: Glycosyl hydrolase, family 13, catalytic domain

phrase: FGAHLCEQQGVAGVRFVVWAPNAERVSVIGNFNHWDGRMHQMRVHGSSGVWEIFIPGLTSSDLYKFEIRNRQTGQILVKTDPY
type: DOMAIN
name: Glyco_hydro_13_N
description: Glycoside hydrolase, family 13, N-terminal

phrase: WIDCSDSDQSIINYLRRARDGSFVLVLLNFTPVLRSGYRVGTPLAGHYREIFNSDAGYYGGSNQGNGNGLQTEAYPWMGHSHSLVVTIPPLGGVIIQ
type: DOMAIN
name: A-amylase/branching_C
description: Alpha-amylase/branching enzyme, C-terminal all beta
Protein sequence:
MGKEEEIARIARRLDKMVTRKNAEGAMDLLRELKNMPITLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKLLDVSDGKSRNQGRGTPLPTSSSKDASRTTDLSCKKPDPPRTPSTPRITTFPQVPITCDAVRNKCREMLTLALQTDHDHVAVGVNCEHLSSQIEECIFLDVGNTDMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGGTQTDLFTCNKCRKKNCTYTQVQTRSSDEPMTTYVVCNECGNRWKFC

Annotated regions:
phrase: CNKCRKKNCTYTQVQTRSSDEPMTTYVVCNECGNR
type: DOMAIN
name: Znf_TFIIS
description: Zinc finger, TFIIS-type

phrase: FTCNKCRKKNCTYTQVQTRSSDEPMTTYVVCNECGNRWK
type: DOMAIN
name: Znf_TFIIS
description: Zinc finger, TFIIS-type

phrase: FTCNKCRKKNCTYTQVQTRSSDEPMTTYVVCNECGNRW
type: DOMAIN
name: Znf_TFIIS
description: Zinc finger, TFIIS-type

phrase: VRNKCREMLTLALQTDHDHVAVGVNCEHLSSQIEECIFLDVGNTDMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIREHQMARTGG
type: DOMAIN
name: TFIIS_cen_dom
description: Transcription elongation factor S-II, central domain

phrase: IARIARRLDKMVTRKNAEGAMDLLRELKNMPITLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKLLD
type: DOMAIN
name: TFIIS/CRSP70_N_sub
description: Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type

phrase: DLFTCNKCRKKNCTYTQVQTRSSDEPMTTYVVCNECGNRW
type: DOMAIN
name: Znf_TFIIS
description: Zinc finger, TFIIS-type

phrase: DAVRNKCREMLTLALQTDHDHVAVGVNCEHLSSQIEECIFLDVGNTDMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRK
type: DOMAIN
name: TFIIS_cen_dom
description: Transcription elongation factor S-II, central domain

phrase: EEIARIARRLDKMVTRKNAEGAMDLLRELKNMPITLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKKLLDV
type: DOMAIN
name: TFIIS_N
description: Transcription factor IIS, N-terminal

phrase: TCDAVRNKCREMLTLALQTDHDHVAVGVNCEHLSSQIEECIFLDVGNTDMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEAIRE
type: DOMAIN
name: TFIIS_cen_dom
description: Transcription elongation factor S-II, central domain

phrase: DLLRELKNMPITLHLLQSTRVGMSVNALRKQSSDEELIALAKSLIKSWKK
type: DOMAIN
name: TFIIS_N
description: Transcription factor IIS, N-terminal
Protein sequence:
MLAVSLKWRLGVVRRRPKDDGPYSKGGKDTAGADGALVCRRQSIPEEFRGITMVELIKREGSTLGLTISGGTDKDGKPRVSNLRPGGLAARSDLLNVGDYIRSVNGIHLTRLRHDEIITLLKNVGERVVLELPKTTQGSFPRRWTSPSTRKATALALSSEEVPMRTCTNPAHWS

Annotated regions:
phrase: MVELIKREGSTLGLTISGGTDKDGKPRVSNLRPGGLAARSDLLNVGDYIRSVNGIHLTRLRHDEIITLLKNVGERVVLELPKT
type: DOMAIN
name: PDZ
description: PDZ domain

phrase: LIKREGSTLGLTISGGTDKDGKPRVSNLRPGGLAARSDLLNVGDYIRSVNGIHLTRLRHDEIITLLKNVGERVVL
type: DOMAIN
name: PDZ
description: PDZ domain

phrase: STLGLTISGGTDKDGKPRVSNLRPGGLAARSDLLNVGDYIRSVNGIHLTRLRHDEIITLLKNVGERVVLELPKT
type: DOMAIN
name: PDZ
description: PDZ domain
Protein sequence:
MKTIVLLFVLVLVFALLVKMGMVEAEHGCPDNEDECHEHCKSIGKSGGYCVGPHKQTCRCN

Annotated regions:
phrase: EHGCPDNEDECHEHCKSIGKSGGYCVGPHKQTCRC
type: DOMAIN
name: Defensin_invertebrate/fungal
description: Defensin, invertebrate/fungal

phrase: GCPDNEDECHEHCKSIGKSGGYCVGPHKQTCR
type: DOMAIN
name: Defensin_invertebrate/fungal
description: Defensin, invertebrate/fungal
Protein sequence:
MAYVTMRELLEAGVHFGHQTRRWNPKMKKYIFGARNGIYIVDLQQTVKMFRDAYDFITDVTAQGKSVLFVGTKKQARDSVYEEANRAETYYVQNRWLGGMLTNFQTIKKTISRFEFLSTIENDGTIEDYPKKERVKMAKERVKLEACIGGISKMKNLPGAIFVIDPKNESIAVKEGKRLGIPIVAVVDTNCDPDDIDYVIPGNDDAIRSIRLFASKIADAAIEGHQRYLEKQNAGSDKDMDEAAFGGSAPVAAAVERTIESDGSDGPVVEMIRRKTIPAE

Annotated regions:
phrase: MRELLEAGVHF
type: CONSERVED_SITE
name: Ribosomal_uS2_CS
description: Small ribosomal subunit protein uS2, conserved site

phrase: PGAIFVIDPKNESIAVKEGKRLGI
type: CONSERVED_SITE
name: Ribosomal_uS2_CS
description: Small ribosomal subunit protein uS2, conserved site
Protein sequence:
MSVQFSEIAEILEDLRQGKMIVLVDDEDRENEGDLVCAAEKVTPEIINFMAKFGRGLICMPLTPDKCDSLGLYPQTVENTARFGTAFTVSIDAAEGVTTGISASDRAKTAQTVIADGAKPSDLVRPGHIFPLRAAKGGVLIRAGQTEGAVDLVRLAGLKPAGVICEVMNEDGTMARVPQLLEFCERHNLRIASIAKLIEYRLQRESQIKRIECVNLPTDYGEFKLIGYESITSPEPHLALCKGGVGDLDENNVPIEHDEPVLVRVHSECMTGDLFHSQRCECGYQLISAIKMIEKTGKGALIYLRQEGRGIGLINKLRAYKLQEQGFNTVDANIKLGFVPDRRDYGIGAQICRDLGLKSIRILTNNPKKISRLEVYGIKVVEQIPLKAAPSKHNIDYLRAKKYYLGHMLDEDL

Annotated regions:
phrase: CVNLPTDYGEFKLIGYESITSPEPHLALCKGGVGDLDENNVPIEHDEPVLVRVHSECMTGDLFHSQRCECGYQLISAIKMIEKTGKGALIYLRQEGRGIGLINKLRAYKLQEQGFNTVDANIKLGFVPDRRDYGIGAQICRDLGLKSIRILTNNPKKISRLEVYGIKVVEQI
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MKLIIATRKSQLALWQSEHVAQILKNTHQIEVLLEGFKTKGDVLLDSPLAKIGGKGLFTKELEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPKGAKIGTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNNDFDAIILAMAGIKRLNLDKQVNFVYEFSKDELIPAASQGALGIESINDEKILELLKCLNDENALIETSIEREFIATLEGGCQVPIGINAELLGDEICVRAVLGLPDGSEILKDKRMIKKNDFKGFGESLAKEFIAKGAKELLKKAESMI

Annotated regions:
phrase: EREFIATLEGGCQVPI
type: BINDING_SITE
name: Porphobilin_deaminase_cofac_BS
description: Porphobilinogen deaminase, dipyrromethane cofactor binding site

phrase: ETSIEREFIATLEGGCQVPIGINAELLGDEICVRAVLGLPDGSEILKDKRMIKKNDFKGFGESLAKEF
type: DOMAIN
name: Porphobilinogen_deaminase_C
description: Porphobilinogen deaminase, C-terminal

phrase: LIIATRKSQLALWQSEHVAQILKNTHQIEVLLEGFKTKGDVLLDSPLAKIGGKGLFTKELEESMLRKEAHLAVHSLKDVPSFFPQGLVLAAVSKREQSNDAMLSQNYKDFLSLPKGAKIGTTSLRRKMQLLLLRPDLEIISLRGNVNSRIEKLKNNDFDAIILAMAGIKRLNLDKQVNFVYEFSKDELIPAASQGALGIESINDE
type: DOMAIN
name: Porphobilin_deaminase_N
description: Porphobilinogen deaminase, N-terminal
Protein sequence:
MEYKLLIGLEVHVQLGLKTKAFCGCKNDFGGIPNSRVCPICLGLPGALPSVNKELVSSAILAGHATNSTIRNIVKFDRKHYAYPDLPKGYQISQNDEPICENGFIFIKTSLGVKRINIARIHMEEDSGKSLHLLSNDNQSYIDFNRAGAPLLEIVSQPDIRSGEEAVAYLNALREIFRYLDLSECSMENGSFRCDVNINLLINENDVNYKTPISEIKNLNSFKSVKLAIDYEESKQKEEWILYRKTLESVGKCTMGFDDKKGITVLQRSKETISDYRYIKDPDLPLIKLESDYIENIKSHRMVELPFDARIRLQEQYGLSDFDVVTLTSDKNLVKYFEEAALTSSEPKKVANWILSEVLSVLNEREIGILDFNLPASYIGELVEFILNGKISGKISKEIFLEMVDRNVSSITIINEKKLEQISDKSFIESIVIEVLNENPKSIELYKKGKSHAVKFMMGQIMRKTSGKVNPVLSNEILMNKLQDV

Annotated regions:
phrase: FNRAGAPLLEIVSQ
type: CONSERVED_SITE
name: Gln-tRNA_amidoTrfase_suB_CS
description: Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site

phrase: KYFEEAALTSSEPKKVANWILSEVLSVLNEREIGILDFNLPASYIGELVEFILNGKISGKISKEIFLEMVDRNVSSITIINEKKLEQISDKSFIESIVIEVLNENPKSIELYKKGKSHAVKFMMGQIMRKTSGKVNPVLSNEILMNK
type: DOMAIN
name: Asn/Gln_amidotransferase
description: Asn/Gln amidotransferase

phrase: LIGLEVHVQLGLKTKAFCGCKNDFGGIPNSRVCPICLGLPGALPSVNKELVSSAILAGHATNSTIRNIVKFDRKHYAYPDLPKGYQISQNDEPICENGFIFIKTSLGVKRINIARIHMEEDSGKSLHLLSNDNQSYIDFNRAGAPLLEIVSQPDIRSGEEAVAYLNALREIFRYLDLSECSMENGSFRCDVNINLLINENDVNYKTPISEIKNLNSFKSVKLAIDYEESKQKEEWILYRKTLESVGKCTMGFDDKKGITVLQRSKETISDYRYIKDPDLPLIKLESDYI
type: DOMAIN
name: Asn/Gln-tRNA_Trfase_suB/E_cat
description: Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic

phrase: KYFEEAALTSSEPKKVANWILSEVLSVLNEREIGILDFNLPASYIGELVEFILNGKISGKISKEIFLEMVDRNVSSITIINEKKLEQISDKSFIESIVIEVLNENPKSIELYKKGKSHAVKFMMGQIMRKTSGKVNPVLSNEILMNK
type: DOMAIN
name: Asn/Gln_amidotransferase
description: Asn/Gln amidotransferase
Protein sequence:
SRCTHLENRDFVTGTQGTTRVTLVLELGGCVTITAEGKPSMDVWLDAIYQESPAKTREYCLHAKLSETKVAARCPTMGPAVLTEERQIGTVCKRDQSDRGWGNHCGLFGKGSIVACVKAACEAKKKATGYVYDANKIVYTVKVEPHTGDYVAANETHKGRKTATFTVSSEKTILTLGEYGDVSLLCRVASGVDLAQTIILELDKTAEHLPTAWQVHRDWFNDLALPWKHDGNPHWNNAERLVEFGAPHAVKMDVYNLGDQTGVLLKALAGVPVAHIEGNKYHLKSGHVTCEVGLEKLKMKGLTYTMCDKSKFAWKRTPTDSGHDTVVMEVTFSGSKPCRIPVRAVAHGSPDVNVAMLITPNPTIENDGGGFIEMQLPPGDNIIYVGELSHQWFQTGSSIGRVFQTTRKGIERLTVIGEHAWDFGSAGGFFSSIGKAVHTVLGGAFNSIFGGVGFLPKLLMGVALAWLGLNTRNPTMSMSFLLAGGLVLAMTLGVGA

Annotated regions:
phrase: SSIGRVFQTTRKGIERLTVIGEHAWDFGSAGGFFSSIGKAVHTVLGGAFNSIFGGVGFLPKLLMGVALAWLGLNTRNPTMSMSFLLAGGLV
type: DOMAIN
name: Flavi_E_Stem/Anchor_dom
description: Flavivirus envelope glycoprotein E, Stem/Anchor domain

phrase: RCTHLENRDFVTGTQGTTRVTLVLELGGCVTITAEGKPSMDVWLDAIYQESPAKTREYCLHAKLSETKVAARCPTMGPAVLTEERQIGTVCKRDQSDRGWGNHCGLFGKGSIVACVKAACEAKKKATGYVYDANKIVYTVKVEPHTGDYVAANETHKGRKTATFTVSSEKTILTLGEYGDVSLLCRVASGVDLAQTIILELDKTAEHLPTAWQVHRDWFNDLALPWKHDGNPHWNNAERLVEFGAPHAVKMDVYNLGDQTGVLLKALAGVPVAHIEGNKYHLKSGHVTCEVGLEKLKMK
type: DOMAIN
name: Flavi_Glycoprot_E_cen/dimer
description: Envelope glycoprotein E, central and dimerisation domain, flavivirus

phrase: KFAWKRTPTDSGHDTVVMEVTFSGSKPCRIPVRAVAHGSPDVNVAMLITPNPTIENDGGGFIEMQLPPGDNIIYVGELSHQWF
type: DOMAIN
name: Flavi_E_Ig-like
description: Glycoprotein E, immunoglobulin-like domain, flavivirus

phrase: YTMCDKSKFAWKRTPTDSGHDTVVMEVTFSGSKPCRIPVRAVAHGSPDVNVAMLITPNPTIENDGGGFIEMQLPPGDNIIYVGELSHQW
type: DOMAIN
name: Flavi_E_Ig-like
description: Glycoprotein E, immunoglobulin-like domain, flavivirus

phrase: GRVFQTTRKGIERLTVIGEHAWDFGSAGGFFSSIGKAVHTVLGGAFNSIFGGVGFLPKLLMGVALAWLGLNTRNPTMSMSFLLAGGLVLAMTLGVG
type: DOMAIN
name: Flavi_E_Stem/Anchor_dom
description: Flavivirus envelope glycoprotein E, Stem/Anchor domain
Protein sequence:
MTLADLKKPTSRATPSTEETFTRVRTPRRENNEILATVESLLGANRLRLRCMDGVVRMGRIPGSMKKKTWIREGDVVIVVPWEFQNEKADVIWKYTRPQVDWLERKGYLKG

Annotated regions:
phrase: TRVRTPRRENNEILATVESLLGANRLRLRCMDGVVRMGRIPGSMKKKTWIREGDVVIVVPWEFQNEKADVIWKY
type: DOMAIN
name: RNA-binding_domain_S1_IF1
description: RNA-binding domain, S1, IF1 type

phrase: NEILATVESLLGANRLRLRCMDGVVRMGRIPGSMKKKTWIREGDVVIVVPWEFQNEKADVIW
type: DOMAIN
name: RNA-binding_domain_S1_IF1
description: RNA-binding domain, S1, IF1 type

phrase: LLGANRLRLRCMDGVVRMGRIP
type: CONSERVED_SITE
name: TIF_eIF-1A_CS
description: Translation initiation factor 1A (eIF-1A), conserved site
Protein sequence:
MPELPEVETVRRSLEQELVGRYFVALRSLGWPKIVDTHSPELFAEAIAQRQIQQVQRRAKYLLIELDNHETLIVHLRMTGQMLVVAADEPADRHTHVVVALDNGRELRFHDPRKFGRWSLVDRSGVAALNQRLGPEPLGDDFTLDDFAQRLSRKATKIKPTLLDQSVLAGVGNIYADEALWLAKIHPLRSANSLNANEIAELFEAIKTVLRNSIEHRGTTLVNYRDAYGASGENQYHLEAYGRTGEPCRRCGTPIERIVVAQRSTHICPVCQA

Annotated regions:
phrase: LGPEPLGDDFTLDDFAQRLSRKATKIKPTLLDQSVLAGVGNIYADEALWLAKIHPLRSANSLNANEIAELFEAIKTVLRNSIEHRGTT
type: DOMAIN
name: DNA_glyclase/AP_lyase_DNA-bd
description: DNA glycosylase/AP lyase, H2TH DNA-binding

phrase: MPELPEVETVRRSLEQELVGRYFVALRSLGWPKIVDTHSPELFAEAIAQRQIQQVQRRAKYLLIELDNHETLIVHLRMTGQMLVVAADEPADRHTHVVVALDNGRELRFHDPRKFGR
type: DOMAIN
name: FPG_cat
description: Formamidopyrimidine-DNA glycosylase, catalytic domain

phrase: PELPEVETVRRSLEQELVGRYFVALRSLGWPKIVDTHSPELFAEAIAQRQIQQVQRRAKYLLIELDNHETLIVHLRMTGQMLVVAADEPADRHTHVVVALDNGRELRFHDPRKFGRW
type: DOMAIN
name: FPG_cat
description: Formamidopyrimidine-DNA glycosylase, catalytic domain

phrase: PELPEVETVRRSLEQELVGRYFVALRSLGWPKIVDTHSPELFAEAIAQRQIQQVQRRAKYLLIELDNHETLIVHLRMTGQMLVVAADEPADRHTHVVVALDNGRELRFHDPRKF
type: DOMAIN
name: FPG_cat
description: Formamidopyrimidine-DNA glycosylase, catalytic domain

phrase: LGPEPLGDDFTLDDFAQRLSRKATKIKPTLLDQSVLAGVGNIYADEALWLAKIHPLRSANSLNANEIAELFEAIKTVLRNSIEHRGTTLVNY
type: DOMAIN
name: DNA_glyclase/AP_lyase_DNA-bd
description: DNA glycosylase/AP lyase, H2TH DNA-binding

phrase: GEPCRRCGTPIERIVVAQRSTHICPVC
type: DOMAIN
name: Znf_FPG/IleRS
description: Zinc finger, FPG/IleRS-type

phrase: EAYGRTGEPCRRCGTPIERIVVAQRSTHICPVCQ
type: DOMAIN
name: Znf_DNA_glyclase/AP_lyase
description: Zinc finger, DNA glycosylase/AP lyase-type

phrase: CRRCGTPIERIVVAQRSTHICPVC
type: BINDING_SITE
name: DNA_glyclase_Znf_dom_DNA_BS
description: DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site
Protein sequence:
MPRSPAKTSPRKGSPRKGSPSRKASPKRGGKGAKRAGKGGRRRRVVKRRRRRRESYGIYIYKVLKQVHPDTGISSRAMSVMNSFVNDVFERIAGEASRLTSANRRSTVSSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTTSR

Annotated regions:
phrase: TSPRKGSPRKGSPSRKASPKRGGKGAKRAGKGGRRRRVVKRRRRRRESYGIYIYKVLKQVHPDTGISSRAMSVMNSFVNDVFERIAGEASRLTSANRRSTVSSREIQTAVR
type: DOMAIN
name: Histone_H2A/H2B/H3
description: Histone H2A/H2B/H3

phrase: REIQTAVRLLLPGELAKHAVSE
type: CONSERVED_SITE
name: HISTONE_H2B_site
description: Histone H2B, conserved site
Protein sequence:
MAKRVRVGQIVNTQGVRGQVRLWPLTEKPSRFNEIKRVFVEAPPQGAPEVLTITSAHPLKKLVIVSFQEISDMTQAERLKGCYLTIPVEEVPAPEPDSYYHFQLEGLSVFTEAGERLGQIEEILETGSNDVYVVRQASPPGEVLIPALKSVVLKVDLAAGTMTVRLPDGLR

Annotated regions:
phrase: FQLEGLSVFTEAGERLGQIEEILETGSNDVYVVRQASPPGEVLIPALKSVVLKVDLAAGTMTVRLPDG
type: DOMAIN
name: PRC_RimM
description: Ribosome maturation factor RimM, PRC barrel domain

phrase: RVGQIVNTQGVRGQVRLWPLTEKPSRFNEIKRVFVEAPPQGAPEVLTITSAHPLKKLVIVSFQEISDMTQAERLKGCYLTIPV
type: DOMAIN
name: RimM_N
description: RimM, N-terminal
Protein sequence:
MSSSNWIDDAFTEEELLAIDAIEASYNFSRSSSSSSSAAPTVQATTSVHGHEEDPNQIPNNIRRQLPRSITSSTSYKRFPLSRCRARNFPAMRFGGRILYSKTATEVDKRAMQLIKVLDTKRDESGIAFVGLDIEWRPSFRKGVLPGKVATVQICVDSNYCDVMHIFHSGIPQSLQHLIEDSTLVKVGIGIDGDSVKLFHDYGVSIKDVEDLSDLANQKIGGDKKWGLASLTETLVCKELLKPNRIRLGNWEFYPLSKQQLQYAATDAYASWHLYKVLKDLPDAVSGS

Annotated regions:
phrase: TEVDKRAMQLIKVLDTKRDESGIAFVGLDIEWRPSFRKGVLPGKVATVQICVDSNYCDVMHIFHSGIPQSLQHLIEDSTLVKVGIGIDGDSVKLFHDYGVSIKDVEDLSDLANQKIGGDKKWGLASLTETLVCKELLKPNRIRLGNWEFYPLSKQQLQYAATDAYASWHLYKVLKDLP
type: DOMAIN
name: 3'-5'_exonuclease_dom
description: 3'-5' exonuclease domain

phrase: FVGLDIEWRPSFRKGVLPGKVATVQICVDSNYCDVMHIFHSGIPQSLQHLIEDSTLVKVGIGIDGDSVKLFHDYGVSIKDVEDLSDLANQKIGGDKKWGLASLTETLVCKELLKPNRIRLGNWEFYPLSKQQLQYAATDAYASWHLYKVL
type: DOMAIN
name: 3'-5'_exonuclease_dom
description: 3'-5' exonuclease domain
Protein sequence:
MDIFKHHESQVQSYANHFPVLFGTAKGSWLYSQQGDAYLDFLSGAGALNYGHNNAVLKQALLEYIERDGLTHGLDMHSEAKAHFIQALQTHILEPRGLNYKLQFTGPTGTNAVEAALKLARKVTGRHNVVTFTNGFHGCSLGALAATGNQHHRQGAGLALSGVYRVPYDGYAGVDGLTLFETMLQDNSSGLDKPAAVLLETVQGEGGLNVASDAWLQRVQAICRAQQILLIVDDIQAGCGRTGTFFSFEPSGIEPDMVTLSKSLSGYGLPMALVLFKPEWDQWKPGEHNGTFRGNNHAFVTATRALEAYWANQDFQTHIAARSEQVTQALLQCLSRYPTLFSGLKGRGLMQGLACHNGDIARDIAALCFQKGLIIETAGAEDEVLKVFCPLTITEADLAHGLTIIERVLLE

Annotated regions:
phrase: LIVDDIQAGCGRTGTFFSFEPSGIEPDMVTLSKSLS
type: CONSERVED_SITE
name: Aminotrans_3_PPA_site
description: Aminotransferases class-III pyridoxal-phosphate attachment site
Protein sequence:
MRSRETSTPCARKGCKYPFTEEAIFCSACKGSYHPTCSDLTPEAFKLSLQTAHAWKCENCLKFDATGDPVQPNKSYIITYVTSNPNKLRETLEILGEQYSTLFKSLDIDLPEYQGTAEEIAILKCRFAAEQIDGPVLVEDTGLGFDALKGLPGPYIKWFLKAVGAEGFHKMLVGFGAENTMAAATCTFAFCAGRGQPVSLFQGVTRGRIVEPRGSSGFGWDPCFLPEGYQSTYAEMDNATKNAISHRFKALQALRQFLVESPQFPSQPPPPSSDSRRLS

Annotated regions:
Protein sequence:
MCAQPVANTKEVRWQKVLYERQPFPDNYVDRRFLEELRKNIYARKYQYWAVVFESSVVIQQLCSVCVFVVIWWYMDEGLLAPQWLFGTGLASSLIGYVLFDFIDGGEGRKKSGRTRWADLKSALVFITFTYGFSPVLKTLTESVSTDTIYAMAVFMLLGHLIFFDYGANAAIVSSTLSLNMAIFASVCLASRLPRSLHAFIMVTFAIQIFALWPMLQKKLKACTPRSYVGVTLLFAFSALGGLLSISAVGAILFALLLISISCLCPFYLIRLQLFKENIHGPWDEAEIKEDLSRFLS

Annotated regions:
Protein sequence:
MVRRLRGDCMEEVERAKAVLKENNVRQVLCAFADVRGYLQMFSIPAREFVDGSAFENGIGFDGSSVRGFRTIEKSDMVWMPDASSLKIIPWIDDPIQKSAIMFGNVYEAWGTEIADCDPRGYVAKRYEDMLKSEGMSAIFGPEIEFFLFEGVDFTRLSWDMWVSPNGGAGDSWGPPRIMPISSELESGYMIRPKEGYFRPPPEDTTVEYRNELVYYLEQLGIDIEYHHHEVATAGQVELDFKPKQLVDVGDAFYLYKFAAKNIAAMHGLYATFMPKPLYLDNASGMHTHQSLWKGEPFSGEAVFADPDDEYMLSQKARYYIGGLLEHAKALTALCAPTVNSYKRLVPGFEAPIYICWSPRNRSALVRVPMYVKKPSAIRVEYRGVDPSCNPYLAITAQLAAGLDGIKKKIDPGDPLLEDVYELTPAQKRELGVGELPTTLRDAIDHLASDELMQEVLGSHIFDAFMELKIDEWNQYCLYITPWEFMKYFDI

Annotated regions:
phrase: KPLYLDNASGMHTHQ
type: CONSERVED_SITE
name: Gln_synth_gly_rich_site
description: Glutamine synthetase, glycine-rich site

phrase: DCDPRGYVAKRYEDMLKSEGMSAIFGPEIEFFLFEGVDFTRLSWDMWVSPNGGAGDSWGPPRIMPISSELESGYMIRPKEGYFRPPPEDTTVEYRNELVYYLEQLGIDIEYHHHEVATAGQVELDFKPKQLVDVGDAFYLYKFAAKNIAAMHGLYATFMPKPLYLDNASGMHTHQSLWKGEPFSGEAVFADPDDEYMLSQKARYYIGGLLEHAKALTALCAPTVNSYKRLVPGFEAPIYICWSPRNRSALVRVPMYVKKPSAIRVEYRGVDPSCNPYLAITAQLAA
type: DOMAIN
name: Gln_synth_cat_dom
description: Glutamine synthetase, catalytic domain

phrase: NNVRQVLCAFADVRGYLQMFSIPAREFVDGSAFENGIGFDGSSVRGFRTIEKSDMVWMPDASSLKIIPWIDDPIQKSAIMFGNVYEAW
type: DOMAIN
name: Gln_synt_N
description: Glutamine synthetase, N-terminal domain

phrase: NVRQVLCAFADVRGYLQMFSIPAREFVDGSAFENGIGFDGSSVRGFRTIEKSDMVWMPDASSLKIIPWIDDPIQKSAIMFGNVY
type: DOMAIN
name: Gln_synt_N
description: Glutamine synthetase, N-terminal domain

phrase: PRGYVAKRYEDMLKSEGMSAIFGPEIEFFLFEGVDFTRLSWDMWVSPNGGAGDSWGPPRIMPISSELESGYMIRPKEGYFRPPPEDTTVEYRNELVYYLEQLGIDIEYHHHEVATAGQVELDFKPKQLVDVGDAFYLYKFAAKNIAAMHGLYATFMPKPLYLDNASGMHTHQSLWKGEPFSGEAVFADPDDEYMLSQKARYYIGGLLEHAKALTALCAPTVNSYKRLVPGFEAPIYICWSPRNRSALVRVPMYVKKPSAIRVEYRGVDPSCNPYLAITAQLAAGLDGIKKKIDPGDPLLEDVYELTPAQKRELGVGELPTTLRDAIDHLASDELMQEVLGSHIFDAFMELKIDEWNQYCLYITPWEFMKYFD
type: DOMAIN
name: Gln_synth_cat_dom
description: Glutamine synthetase, catalytic domain

phrase: CDPRGYVAKRYEDMLKSEGMSAIFGPEIEFFLFEGVDFTRLSWDMWVSPNGGAGDSWGPPRIMPISSELESGYMIRPKEGYFRPPPEDTTVEYRNELVYYLEQLGIDIEYHHHEVATAGQVELDFKPKQLVDVGDAFYLYKFAAKNIAAMHGLYATFMPKPLYLDNASGMHTHQSLWKGEPFSGEAVFADPDDEYMLSQKARYYIGGLLEHAKALTALCAPTVNSYKRLVPGFEAPIYICWSPRNRSALVRVPMYVKKPSAIRVEYRGVDPSCNPYLAITAQLAAGLDGIKKKIDPGDPLLEDVYELTPAQKRELGVGELPTTLRDAIDHLASDELMQEVLGSHIFDAFMELKIDEWNQYCLYITPWEFMK
type: DOMAIN
name: Gln_synth_cat_dom
description: Glutamine synthetase, catalytic domain
Protein sequence:
MDSNTVSSFQVDCFLWNVRKRFADQELGDAPFLDRLRRDQKSLRGRGSTLGLDIETATRVGKQIVERILEEESDEALKMNIASVPASRYLTDMTLEEMSRDWFMLMPKQKVAGSLCIRMDQAIMDKTITLKANFSVIFERLETLILLRAFTEEGSIVGEISPLPSLSGHTNEDVKNAIGILIGGLEWNDNTVRVSETLQRFAWRSSNEDGRPPLPPKQK

Annotated regions:
Protein sequence:
MDAKKYLEEGARARLNLNIEKIIGIADKISSAISSGNKLIVFGNGGSAADAQHFVAELTGHFMKERKPLAAIALTTNTSSITAIANDYSYDVVFSRQVEALAKPGDVVVGISTSGNSKNVIEGIKSAKRIGCHTIAFTGRSGGQLKGVADETLNVDSDLTSIIQEMHITVIHMICAMIDEKF

Annotated regions:
phrase: NIEKIIGIADKISSAISSGNKLIVFGNGGSAADAQHFVAELTGHFMKERKPLAAIALTTNTSSITAIANDYSYDVVFSRQVEALAKPGDVVVGISTSGNSKNVIEGIKSAKRIGCHTIAFT
type: DOMAIN
name: SIS_dom
description: SIS domain

phrase: ISSAISSGNKLIVFGNGGSAADAQHFVAELTGHFMKERKPLAAIALTTNTSSITAIANDYSYDVVFSRQVEALAKPGDVVVGISTSGNSKNVIEGIKSAKRIGCHTIAFTGRSGGQLKGVADETLNVDSDLTSIIQEMHITVIHMICAMIDEK
type: DOMAIN
name: SIS_dom
description: SIS domain
Protein sequence:
MIIEIEGIKLKLHPEVYEPAEDSILLLKNLVDVKNKDVLEIGVGTGLISIACAKKGAKKIVGVDINPYAVKLAKENAKLNNVNISFFESDLFENVTGKFDVILFNPPYLPTSEDEKIDSYLNFAFDGGKDGREILDRFIYELPNYLKKGGVVQILQSSLTGEKETINKLKPLGFKVEISARLKVPFEELMVINAWRL

Annotated regions:
phrase: ILFNPP
type: CONSERVED_SITE
name: DNA_methylase_N6_adenine_CS
description: DNA methylase, N-6 adenine-specific, conserved site

phrase: SILLLKNLVDVKNKDVLEIGVGTGLISIACAKKGAKKIVGVDINPYAVKLAKENAKLNNVNISFFESDLFENVTGKFDVILFNPPYLPTS
type: DOMAIN
name: Small_mtfrase_dom
description: Methyltransferase small domain
Protein sequence:
MGNGVTKLSICFTGGGGERLRPKDISVLLPDPLDEGLGHSFCYVRPDPTLISSSKVHSEEDTTTTTFRTISGASVSANTATPLSTSLYDPYGHIDRAAAFESTTSFSSIPLQPIPKSSGPIVLGSGPIERGFLSGPIERGFMSGPLDRVGLFSGPLDKPNSDHHHQFQRSFSHGLALRVGSRKRSLVRILRRAISKTMSRGQNSIVAPIKSVKDSDNWGIRSEKSRNLHNENLTVNSLNFSSEVSLDDDVSLENQNLQWAQGKAGEDRVHVVVSEEHGWLFVGIYDGFNGPDAPDYLLSHLYPVVHRELKGLLWDDSNVESKSQDLERSNGDESCSNQEKDETCERWWRCEWDRESQDLDRRLKEQISRRSGSDRLTNHSEVLEALSQALRKTEEAYLDTADKMLDENPELALMGSCVLVMLMKGEDIYVMNVGDSRAVLGQKSEPDYWLAKIRQDLERINEETMMNDLEGCEGDQSSLVPNLSAFQLTVDHSTNIEEEVERIRNEHPDDVTAVTNERVKGSLKVTRAFGAGFLKQPKWNNALLEMFQIDYVGKSPYINCLPSLYHHRLGSKDRFLILSSDGLYQYFTNEEAVSEVELFITLQPEGDPAQHLVQELLFRAAKKAGMDFHELLEIPQGERRRYHDDVSIVVISLEGRMWKSCV

Annotated regions:
phrase: ISRRSGSDRLTNHSEVLEALSQALRKTEEAYLDTADKMLDENPELALMGSCVLVMLMKGEDIYVMNVGDSRAVLGQKS
type: DOMAIN
name: PPM-type_phosphatase-like_dom
description: PPM-type phosphatase-like domain

phrase: SAFQLTVDHSTNIEEEVERIRNEHPDDVTAVTNERVKGSLKVTRAFGAGFLKQPKWNNALLEMFQIDYVGKSPYINCLPSLYHHRLGSKDRFLILSSDGLYQYFTNEEAVSEVELFITLQPEGD
type: DOMAIN
name: PPM-type_phosphatase-like_dom
description: PPM-type phosphatase-like domain

phrase: KAGEDRVHVVVSEEHGWLFVGIYDGFNGPDAPDYLLSHLYPVVHRELKGLLWDDSNVESKSQDLERSNGDESCSNQEKDETCERWWRCEWDRESQDLDRRLKEQISRRSGSDRLTNHSEVLEALSQALRKTEEAYLDTADKMLDENPELALMGSCVLVMLMKGEDIYVMNVGDSRAVLGQKSEPDYWLAKIRQDLERINEETMMNDLEGCEGDQSSLVPNLSAFQLTVDHSTNIEEEVERIRNEHPDDVTAVTNERVKGSLKVTRAFGAGFLKQPKWNNALLEMFQIDYVGKSPYINCLPSLYHHRLGSKDRFLILSSDGLYQYFTNEEAVSEVELFITLQPEGDPAQHLVQELLFRAAKKAGMDFHELLEIPQGERRRYHDDVSIVVIS
type: DOMAIN
name: PPM-type_phosphatase-like_dom
description: PPM-type phosphatase-like domain

phrase: DVSLENQNLQWAQGKAGEDRVHVVVSEEHGWLFVGIYDGFNGPDAPDYLLSHLYPVVHRELKGLLWDDSNVESKSQDLERSNGDESCSNQEKDETCERWWRCEWDRESQDLDRRLKEQISRRSGSDRLTNHSEVLEALSQALRKTEEAYLDTADKMLDENPELALMGSCVLVMLMKGEDIYVMNVGDSRAVLGQKSEPDYWLAKIRQDLERINEETMMNDLEGCEGDQSSLVPNLSAFQLTVDHSTNIEEEVERIRNEHPDDVTAVTNERVKGSLKVTRAFGAGFLKQPKWNNALLEMFQIDYVGKSPYINCLPSLYHHRLGSKDRFLILSSDGLYQYFTNEEAVSEVELFITLQPEGDPAQHLVQELLFRAAKKAGMDFHELLEIPQGERRRYHDDVSIVVIS
type: DOMAIN
name: PPM-type_phosphatase-like_dom
description: PPM-type phosphatase-like domain

phrase: VSLENQNLQWAQGKAGEDRVHVVVSEEHGWLFVGIYDGFNGPDAPDYLLSHLYPVVHRELKGLLWDDSNVESKSQDLERSNGDESCSNQEKDETCERWWRCEWDRESQDLDRRLKEQISRRSGSDRLTNHSEVLEALSQALRKTEEAYLDTADKMLDENPELALMGSCVLVMLMKGEDIYVMNVGDSRAVLGQKSEPDYWLAKIRQDLERINEETMMNDLEGCEGDQSSLVPNLSAFQLTVDHSTNIEEEVERIRNEHPDDVTAVTNERVKGSLKVTRAFGAGFLKQPKWNNALLEMFQIDYVGKSPYINCLPSLYHHRLGSKDRFLILSSDGLYQYFTNEEAVSEVELFITLQPEGDPAQHLVQELLFRAAKKAGMDFHELLEIPQGERRRYHDDVSIVV
type: DOMAIN
name: PPM-type_phosphatase-like_dom
description: PPM-type phosphatase-like domain
Protein sequence:
MPHRKKKPFIENKKAVTFHLVHRSQRDPLAADETAPQRVLLPADKADTEKRKEEQRDFGVFFDDDYNYLQHLKERGPSELIPSATSKSKSCIITDQDGDKEKEPQHVPGPSINLPSSVFASEFEEDVGLLNKAAPVRGLCLDLDPDIVAALDEDFDFDDPENQLDDDFILQANSDDLRRSSHEKDDDDDDWEDVESGSEENDYDSDGTVSDEDDGEGDGARKEFLFMQEETKSRFTEYSMTSSVIRRNEQLTLLDERFEKFYEQFDDDEIGALDNTELEGFIDSNSGRLEEVINDYYKQKAKDCVKLKNLTPRDGMDSVTEEDDEDKEDMQTIVIEEPREKWDCESILSTYSNLYNHPQIIKDPPKAKLIRVSVKTGIPMDVLPGRGLTAKQVERMEMINSSDIPRVSTHPRKDESKEERKARKQAIKEERKERRVEKKSNKLAFKEEKSRQVKEQLNLKQNLQGLKLS

Annotated regions:
Protein sequence:
MSDAEDIPTGRKRRPREQTPVQRALGLLVRREHSRKELTRKLTARGIEDEAAQAAVAKLTEAGWQDDARFAENLVRMRANTGYGPIHVRAELGTHGLDSEAIAAAMDSYEGDWQENARDLVRRRFGETGPQDLAQRRKAADLLARRGFDGDSIRRATRYDPDD

Annotated regions:
phrase: DDARFAENLVRMRANTGYGPIHVRAELGTHGLDSEAIAAA
type: DOMAIN
name: RecX_HTH_2nd
description: RecX, second three-helical domain

phrase: QRALGLLVRREHSRKELTRKLTARGIEDEAAQAAVAK
type: DOMAIN
name: RecX_HTH_1st
description: RecX, first three-helical domain

phrase: DWQENARDLVRRRFGETGPQDLAQRRKAADLLARRGFDGDSIRR
type: DOMAIN
name: RecX_HTH_3rd
description: RecX, third three-helical domain