nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSIVNILSVNVLNNPAKFSDPYKFEITFECLEPLKSDLEWKLTYVGSATSQSYDQILDTLLVGPIPIGINKFVFEADPPNIDLLPQLSDVLGVTVILLSCAYEDNEFVRVGYYVNNEMEGLNLQEMDDAEIKKVKVDISKVWRSILAEKPRVTRFNIQWDNPDFDDAPPVQPDADEEEEEEEADEMEEEFDEEGEGDEEEEEEDDGDGDGEGDGDGEGENDGKGSEEEEEEEIDIEEEEEESALANASAAEEKPEEKPETSQ

Annotated regions:
Protein sequence:
MSDRIAVLPQYLLPKQALTSFAGRMASARAGQLTTAVIRRFVARYGVDMSEAANPDIASYATFNDFFTRALRPGLRPLADAAVVCPVDGAVSQIGPIEQDQIFQAKGHLYSTAALLGGDAEMAAQFQDGSFATIYLSPRDYHRIHMPCDGRLVRMDHVPGALFSVNPTTARGVPGLFARNERVVCLFETPLGPMALVLVGATIVGSMATVWHGQVNPPRTGQPRRWDYGDREVVLRQGDEMGRFLLGSTVVLLFPRGAVQFMPGWEAARPVRLGEAMAHRCGI

Annotated regions:
Protein sequence:
MQTSQKHHSAAGLHMLYPQVYCSPQFQAKDNKGFSDIPSKENFFTLESSTASGSLPSYDSPSVSITSGRSPFSPQGSQSCISDLHHSPDNVYGSPLSGVSSLAYDEAGVKSKIRELEVSLLSGDTKVEEFSGFSPAAGKSWNWDELLALTPQLDLKEVLVEAARAVADGDFATAYGFLDVLEQMVSVSGSPIQRLGTYMAEGLRARLEGSGSNIYKSLKCNEPTGRELMSYMSVLYEICPYWKFAYTTANVEILEAIAGETRVHIIDFQIAQGSQYMFLIQELAKRPGGPPLLRVTGVDDSQSTYARGGGLSLVGERLATLAQSCGVPFEFHDAIMSGCKVQREHLGLEPGFAVVVNFPYVLHHMPDESVSVENHRDRLLHLIKSLSPKLVTLVEQESNTNTSPFLSRFVETLDYYTAMFESIDAARPRDDKQRISAEQHCVARDIVNMIACEESERVERHEVLGKWRVRMMMAGFTGWPVSTSAAFAASEMLKAYDKNYKLGGHEGALYLFWKRRPMATCSVWKPNPN

Annotated regions:
Protein sequence:
MLFTDYMANFLVGYFSVLSSIMPLLAETSSTGEGLKLLGAGVAIIGVAGAGIGQGAVGQGACMAIGRNPEMAPKITSTMIIAAGIAESGAIYALVVAILLIFVA

Annotated regions:
phrase: LGAGVAIIGVAGAGIGQGAVGQGACMAIGRNPEMAPKITSTMIIAAGIAESGAIYALVVAIL
type: DOMAIN
name: ATPase_proteolipid_c-like_dom
description: V-ATPase proteolipid subunit C-like domain

phrase: GRNPEMAPKITSTMIIAAGIA
type: BINDING_SITE
name: ATP_synth_F0_csu_DDCD_BS
description: ATP synthase, F0 complex, subunit C, DCCD-binding site
Protein sequence:
MMRFLNHCSQGRSAWLLMILTALILESSALYFQHVMKLQPCVMCIYERVALFGVLSAGILGVIAPKTPLRWLAIILWIYSAWGGLQLAWQHTMMQLHPSPFNTCDFFVNFPSWLALNQWLPSVFEATGDCSVRQWQFLTLEMPQWLVGIFAAYLVVAALVLISQFFSRK

Annotated regions:
Protein sequence:
MQLTELIETTVTGLGYELVDLERTGRGMVCVYIDQPAGITIDDCEKVTRQLQHVLTVENIDYERLEVSSPGLDRPLKKLADFTRFAGSEAVITLKKPLDGRKTYRGILHAPNGETIGLEFERKKGEAAMLDFTLADVDKARLIPHVDFRSRKQ

Annotated regions:
phrase: LKKLADFTRFAGSEAVITLKKPLDGRKTYRGILHAPNGETIGLEFERKKGEAAMLDFTLADVDKARLIP
type: DOMAIN
name: RimP_C
description: Ribosome maturation factor RimP, C-terminal

phrase: LIETTVTGLGYELVDLERTGRGMVCVYIDQPAGITIDDCEKVTRQLQHVLTVENIDYERLEVSSPGL
type: DOMAIN
name: RimP_N
description: Ribosome maturation factor RimP, N-terminal

phrase: GLDRPLKKLADFTRFAGSEAVITLKKPLDGRKTYRGILHAPNGETIGLEFERKKGEAAMLDFTLADVDKARLI
type: DOMAIN
name: RimP_C
description: Ribosome maturation factor RimP, C-terminal
Protein sequence:
MKPIAAFQEYLEVERQYSPETVTAYLSDLQEFQAFLKANGGFTDFRHVDDLDVQTYLTDLNKQDLARTSIARKISSLRSFYRYLTRIDVVKRNPFELVELKKQHHHLPQFFYEAEIQELFKTVAGKTPLDQRNRALLEVLYGTGIRVSECAKLTLNQVDFNTALLLIHGKGNKDRYVPFGQYAQQALRTYLKDGRQVLMAKSQAQHRYVFVNQYGRPITSRGIEYILDQLIKQTTLTANIHPHMLRHSFATHMLDHGADLRTVQELLGHASLSTTQIYTHVTMAHLKNEYMKYYPKHN

Annotated regions:
phrase: MKPIAAFQEYLEVERQYSPETVTAYLSDLQEFQAFLKANGGFTDFRHVDDLDVQTYLTDLNKQDLARTSIARKISSLRSFYRYL
type: DOMAIN
name: CB
description: Core-binding (CB) domain

phrase: FFYEAEIQELFKTVAGKTPLDQRNRALLEVLYGTGIRVSECAKLTLNQVDFNTALLLIHGKGNKDRYVPFGQYAQQALRTYLKDGRQVLMAKSQAQHRYVFVNQYGRPITSRGIEYILDQLIKQTTLTANIHPHMLRHSFATHMLDHGADLRTVQELLGHASLSTTQIYTHVTM
type: DOMAIN
name: Integrase_catalytic
description: Integrase, catalytic domain

phrase: HLPQFFYEAEIQELFKTVAGKTPLDQRNRALLEVLYGTGIRVSECAKLTLNQVDFNTALLLIHGKGNKDRYVPFGQYAQQALRTYLKDGRQVLMAKSQAQHRYVFVNQYGRPITSRGIEYILDQLIKQTTLTANIHPHMLRHSFATHMLDHGADLRTVQELLGHASLSTTQIYTHVTMAHLKNEY
type: DOMAIN
name: Integrase_catalytic
description: Integrase, catalytic domain

phrase: IAAFQEYLEVERQYSPETVTAYLSDLQEFQAFLKANGGFTDFRHVDDLDVQTYLTDLNKQDLARTSIARKISSLRSFYRYLT
type: DOMAIN
name: Integrase_SAM-like_N
description: Integrase, SAM-like, N-terminal
Protein sequence:
MICKDDHSTLRARFRGFYPVVVDVETAGLDANINALLEIAVATFKMDEYGWLCVDGSLNFHIKSFPGAIIQPESLAFNGIDLNSPLRAAVTEQEALHEIFEMVRQGIKTQGCSRAIIVAHNAFFDHSFLMAAVERVSFMEKNPFHPFVMFDTATLSGLVFGQTVLAKACACAGVFFDKNKAHSALYDTERTAMLFCELVNKWKRLGGWPLTPCCIES

Annotated regions:
phrase: VVVDVETAGLDANINALLEIAVATFKMDEYGWLCVDGSLNFHIKSFPGAIIQPESLAFNGIDLNSPLRAAVTEQEALHEIFEMVRQGIKTQGCSRAIIVAHNAFFDHSFLMAAVERVSFMEKNPFHPFVMFDTATLSGLVFGQTVLAKACACAGVFFDKNKAHSALYDTERTAML
type: DOMAIN
name: Exonuclease_RNaseT/DNA_pol3
description: Exonuclease, RNase T/DNA polymerase III

phrase: YPVVVDVETAGLDANINALLEIAVATFKMDEYGWLCVDGSLNFHIKSFPGAIIQPESLAFNGIDLNSPLRAAVTEQEALHEIFEMVRQGIKTQGCSRAIIVAHNAFFDHSFLMAAVERVSFMEKNPFHPFVMFDTATLSGLVFGQTVLAKACACAGVFFDKNKAHSALYDTERTAMLFCELVNKWK
type: DOMAIN
name: Exonuclease_RNaseT/DNA_pol3
description: Exonuclease, RNase T/DNA polymerase III
Protein sequence:
MIFTKVDALVKDIDVDKYHIETVILSSDDLNKKIIRVKSDHGNEFGIRLDKGQKLQNGSAFFIDDHHVLVIGVESQDLIVISPKDMDEMGITAHILGNTHKPIEVKDAKIYLEVDPVVEQVLTQKEIAYTIEEVVLDKPLRHVNLTAHEH

Annotated regions:
phrase: QDLIVISPKDMDEMGITAHILGNTHKPIEVKDAKIYLEVDPVVEQVLTQKEIAY
type: DOMAIN
name: UreE_C_dom
description: Urease accessory protein UreE, C-terminal domain

phrase: VDALVKDIDVDKYHIETVILSSDDLNKKIIRVKSDHGNEFGIRLDKGQKLQNGSAFFIDDHHV
type: DOMAIN
name: UreE_N
description: UreE urease accessory, N-terminal

phrase: DKYHIETVILSSDDLNKKIIRVKSDHGNEFGIRLDKGQKLQNGSAFFIDDH
type: DOMAIN
name: UreE_N
description: UreE urease accessory, N-terminal
Protein sequence:
MAYRKRGARREANLNNNDRMQEKNDEKQDSNKIQLSDKVLSKKEEVVTDSHEEVKITDEVKKSTKEESKQLLEVLKTKEEHQKEIQYEILQKTIPTFEPKETILRKLEDIKPELAKKQTKLFRIFEPKQLPIYRANGERELRNRWYWKLKKDTLPDGDYDVREYFLNLYDQVLTEMPDYLLLKDMAVENKNSRDAGKVVDSETASICDAIFQDEETEGAVRRFIAEMRQRVQADRNVVNYPSILHPIDYAFNEYFLQHQLVEPLNNDIIFNYIPERIRNDVNYILNMDRNLPSTARYIRPNLLQDRLNLHDNFESLWDTITTSNYILARSVVPDLKELVSTEAQIQKMSQDLQLEALTIQSETQFLTGINSQAANDCFKTLIAAMLSQRTMSLDFVTTNYMSLISGMWLLTVVPNDMFIRESLVACQLAIVNTIIYPAFGMQRMHYRNGDPQTPFQIAEQQIQNFQVANWLHFVNNNQFRQAVIDGVLNQVLNDNIRNGHVINQLMEALMQLSRQQFPTMPVDYKRSIQRGILLLSNRLGQLVDLTRLLAYNYETLMACITMNMQHVQTLTTEKLQLTSVTSLCMLIGNATVIPSPQTLFHYYNVNVNFHSNYNERINDAVAIITAANRLNLYQKKMKAIVEDFLKRLYIFDVSRVPDDQMYRLRDRLRLLPVEIRRLDIFNLILMNMDQIERASDKIAQGVIIAYRDMHLERDEMYGYVNIARNLEGFQQINLEELMRSGDYAQITNMLLNNQPVALVGALPFITDSSVISLIAKLDATVFAQIVKLRKVDTLKPILYKINSDSNDFYLVANYDWVPTSTTKVYKQVPQQFDFRNSMHMLTSNLTFTVYSDLLAFVSADTVEPINAVAFDNMRIMNEL

Annotated regions:
Protein sequence:
MIVIPAIDLKEGRCVRLEQGLMEKDTVYNDNPGAQARSWQEQGGELLHIVDLDGAFAGVPRNRDAIRAIAEAVSIPTELGGGIRDLPTIEAYLELGIDRVILGTVAKENPELVREACRLFPGRIVVGIDARDGLVAVRGWADVTEKLATELAKEMEGFGVEAIIYTDIARDGMMGGPNLEATRALAESISVPVIASGGVSCLEDIARLMTIEDSGVTGVITGKALYTGSLDLREAVALTKGKA

Annotated regions:
Protein sequence:
MFITIEGIEGSGKTTLINRLSEYFSSRGEDVIVTREPGGCELGGLLRSLVLSSELGLTAESELFLFLADRAQHVSECIQPAIMNGKTVFCDRYADSTIVYQGYGRGMNIGKLWEFNEVAIKGIWPQKTLLLDIDVEKALERACIRNEALGLNIVEGRFESEPMDFHNRIRDGFLHWAGRNPDRITILNADTTPEDLFQQSVSVLREIV

Annotated regions:
phrase: IEGIEGSGKTTLINRLSEYFSSRGEDVIVTREPGGCELGGLLRSLVLSSELGLTAESELFLFLADRAQHVSECIQPAIMNGKTVFCDRYADSTIVYQGYGRGMNIGKLWEFNEVAIKGIWPQKTLLLDIDVEKALERACIRNEALGLNIVEGRFESEPMDFHNRIRDGFLHWAGRNPDRITILNADTTPEDLF
type: DOMAIN
name: Thymidylate_kin-like_dom
description: Thymidylate kinase-like domain
Protein sequence:
MGCKGDASGACAAGALPVTGVCYKMGVLVVLTVLWLFSSVKADSKAITTSLTTKWFSTPLLLEASEFLAEDSQEKFWNFVEASQNIGSSDHDGTDYSYYHAILEAAFQFLSPLQQNLFKFCLSLRSYSATIQAFQQIAADEPPPEGCNSFFSVHGKKTCESDTLEALLLTASERPKPLLFKGDHRYPSSNPESPVVIFYSEIGSEEFSNFHRQLISKSNAGKINYVFRHYIFNPRKEPVYLSGYGVELAIKSTEYKAKDDTQVKGTEVNTTVIGENDPIDEVQGFLFGKLRDLHPDLEGQLKELRKHLVESTNEMAPLKVWQLQDLSFQTAARILASPVELALVVMKDLSQNFPTKARAITKTAVSSELRTEVEENQKYFKGTLGLQPGDSALFINGLHMDLDTQDIFSLFDVLRNEARVMEGLHRLGIEGLSLHNVLKLNIQPSEADYAVDIRSPAISWVNNLEVDSRYNSWPSSLQELLRPTFPGVIRQIRKNLHNMVFIVDPAHETTAELMNTAEMFLSNHIPLRIGFIFVVNDSEDVDGMQDAGVAVLRAYNYVAQEVDDYHAFQTLTHIYNKVRTGEKVKVEHVVSVLEKKYPYVEVNSILGIDSAYDRNRKEARGYYEQTGVGPLPVVLFNGMPFEREQLDPDELETITMHKILETTTFFQRAVYLGELPHDQDVVEYIMNQPNVVPRINSRILTAERDYLDLTASNNFFVDDYARFTILDSQGKTAAVANSMNYLTKKGMSSKEIYDDSFIRPVTFWIVGD

Annotated regions:
phrase: STPLLLEASEFLAEDSQEKFWNFVEASQNIGSSDHDGTDYSYYHAILEAAFQFLSPLQQNLFKFCLSLRSYSATIQAFQQIAADEPPPEGCNSFFSVHGKKTCESDTLEALLLTASERPKPLLFKGDHRYPSSNPESPVVIFYSEIGSEEFSNFHRQLISKSNAGKINYVFRHYIFNPR
type: DOMAIN
name: UGGT_TRXL_1
description: UGGT, thioredoxin-like domain 1

phrase: TNEMAPLKVWQLQDLSFQTAARILASPVELALVVMKDLSQNFPTKARAITKTAVSSELRTEVEENQKYFKGTLGLQPGDSALFINGLHMDLDTQDIFSLFDVLRNEARVMEGLHRLGIEGLSLHNVLKL
type: DOMAIN
name: UGGT_TRXL_2
description: UGGT, thioredoxin-like domain 2

phrase: VDIRSPAISWVNNLEVDSRYNSWPSSLQELLRPTFPGVIRQIRKNLHNMVFIVDPAHETTAELMNTAEMFLSNHIPLRIGFIFVVNDSEDVDGMQDAGVAVLRAYNYVAQEVDDYHAFQTLTHIYNKVRTGEKVKVEHVVSVLEKKYPYVEVNSILGIDSAYDRNRKEARGYYEQTGVGPLPVVLFNGMPFEREQLDPDELETITMHKILETTTFFQRAVYLGELPHDQDVVEYIMNQPNVVPRINSR
type: DOMAIN
name: UGGT_TRXL_3
description: UGGT, thioredoxin-like domain 3
Protein sequence:
MTGSVTLQRMKDLAGKHIVLGLSGGIACYKSAELCRLLIKAGATVQVVMSAAAEQFMTPVTMQALSQRTVYGSQWDSREPNNMAHINLTRQADLCLLAPASADVIAKLAQGRADDLLSLMCLARPIEHVPLLIAPAMNKEMWQHPATQRNLVQVALDGAQVLSVGCGEQACGETGDGRMLEPAEILDEVIAFFQPKLLRGQHVLVTAGPTFEAIDPVRGITNLSSGKMGFAIARAAREAGADVTLVAGPVSLPTPRGVVRVNVKSALNMLEEVVDKAQNATVFVATSAVADWRPASMLDRKIKKDATGLPPTLHFVENPDILATVAQSERGHSGALFCVGFAAESHDLLANAQAKRLRKGVPLLVGNIGPDTFGQDDNALVLIDETGVRELSRDSKLSLARKLIATIAQKISVGDQNDEN

Annotated regions:
phrase: KHIVLGLSGGIACYKSAELCRLLIKAGATVQVVMSAAAEQFMTPVTMQALSQRTVYGSQWDSREPNNMAHINLTRQADLCLLAPASADVIAKLAQGRADDLLSLMCLARPIEHVPLLIAPAMNKEMWQHPATQRNLVQVALDGAQVLSVGCGEQACGETGDGRMLEPAEILDEVI
type: DOMAIN
name: Flavoprotein
description: Flavoprotein

phrase: LRGQHVLVTAGPTFEAIDPVRGITNLSSGKMGFAIARAAREAGADVTLVAGPVSLPTPRGVVRVNVKSALNMLEEVVDKAQNATVFVATSAVADWRPASMLDRKIKKDATGLPPTLHFVENPDILATVAQSERGHSGALFCVGFAAESHDLLANAQAKRLRKGVPLLVGNIGPDTFGQDDNALVL
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal
Protein sequence:
MEESAVDDVIERLLEVRNNRPGKQVNLAEGEIRQLCLTAKDVFMSQPNLLELEAPIKICGDIHGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAFKVKYPKNFFLLRGNHECASINRIYGFYDVCKRRYNIRLWKTFTDCFNCLPACALVDEKIICMHGGLSPELKSLDAIRHIPRPTDVPDTGLLCDLLWSDPDKDVAGWGENDRGVSYTFGPDTVTGFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGALMSVDDTLMCSFQILKPSEKKGKLLYGSGALAGPGRGTPRR

Annotated regions:
phrase: LAEGEIRQLCLTAKDVFMSQPNLLELEAPIKICGDIHGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAFKVKYPKNFFLLRGNHECASINRIYGFYDVCKRRYNIRLWKTFTDCFNCLPACALVDEKIICMHGGLSPELKSLDAIRHIPRPTDVPDTGLLCDLLWSDPDKDVAGWGENDRGVSYTFGPDTVTGFLQKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGALMSVDDTLMCSFQILKPS
type: DOMAIN
name: Ser/Thr-sp_prot-phosphatase
description: Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase

phrase: PIKICGDIHGQYTDLLRLFEYGGFPPE
type: DOMAIN
name: Ser/Thr-sp_prot-phosphatase
description: Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase

phrase: YLFLGDYVDRGKQSLETICLLLAFKVK
type: DOMAIN
name: Ser/Thr-sp_prot-phosphatase
description: Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase

phrase: LLRGNHECASINRIYGFYDVCKRR
type: DOMAIN
name: Ser/Thr-sp_prot-phosphatase
description: Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase

phrase: DCFNCLPACALVDEKIICMHGGLSPE
type: DOMAIN
name: Ser/Thr-sp_prot-phosphatase
description: Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase

phrase: LDAIRHIPRPTDVPDTGLLCDLLWSDP
type: DOMAIN
name: Ser/Thr-sp_prot-phosphatase
description: Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase

phrase: DLDLICRAHQVVEDGYEFFA
type: DOMAIN
name: Ser/Thr-sp_prot-phosphatase
description: Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase

phrase: QLVTLFSAPNYCGEFD
type: DOMAIN
name: Ser/Thr-sp_prot-phosphatase
description: Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase

phrase: LRGNH
type: DOMAIN
name: Ser/Thr-sp_prot-phosphatase
description: Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase

phrase: VDDVIERLLEVRNNRPGKQVNLAEGEIRQLCLTAKDVFMSQPNLLEL
type: DOMAIN
name: STPPase_N
description: Serine-threonine protein phosphatase, N-terminal

phrase: PIKICGDIHGQYTDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAFKVKYPKNFFLLRGNHECASINRIYGFYDVCKRRYNIRLWKTFTDCFNCLPACALVDEKIICMHGGLSPELKSLDAIRHIPRPTDVPDTGLLCDLLWSDPDKDVAGWGENDRGVSYTFGPDTVTGFLQKHDLDLICRAHQV
type: DOMAIN
name: Calcineurin-like_PHP_ApaH
description: Calcineurin-like phosphoesterase domain, ApaH type
Protein sequence:
GDDVKSACCDTCLCTKSEPPTCRCVDVGERCHSACNSCVCRYSNPPKCQCFDTHKFCYKSCHN

Annotated regions:
phrase: CCDTCLCTKSEPPTCRCVDVGERCHSACNSCVCRYSNPPKCQCFDTHKFCYKS
type: DOMAIN
name: Prot_inh_BBI
description: Proteinase inhibitor I12, Bowman-Birk

phrase: CCDTCLCTKSEPPTCRCVDVGERCHSACNSCVCRYSNPPKCQCFDTHKFCYKS
type: DOMAIN
name: Prot_inh_BBI
description: Proteinase inhibitor I12, Bowman-Birk

phrase: CVDVGERCHSACNS
type: DOMAIN
name: Prot_inh_BBI
description: Proteinase inhibitor I12, Bowman-Birk

phrase: CCDTCLCTKSEPPTCRCVDVGER
type: DOMAIN
name: Prot_inh_BBI
description: Proteinase inhibitor I12, Bowman-Birk

phrase: ACNSCVCRYSNPPKCQCFDTHKF
type: DOMAIN
name: Prot_inh_BBI
description: Proteinase inhibitor I12, Bowman-Birk
Protein sequence:
MNKTITPSLETIERNWFLVDAKDKTLGRLATEIATVLRGKNKPTYTPHLDTGDFVIVVNAEKVEVTGKKASQKLYRRHSGRPGGMKIEKFESLQERIPERIIEQAVKGMLPHNSLGRQQFKKLKVYKGADHPHAAQNPVLLNS

Annotated regions:
phrase: VKGMLPHNSLGRQQFKKLKVYK
type: CONSERVED_SITE
name: Ribosomal_uL13_CS
description: Large ribosomal subunit protein uL13, conserved site
Protein sequence:
MARYTGPVEKIERRLGVSLELKGERRLAGKSALDKRPYAPGQHGQRRTKISEYGLQLREKQKIKFYYGVLEKQFRKFFREANRQEGNTGENLIKLLERRLDNVVYRMGFASTRRFARQLVTHGHILVNGKKVNIPSYLVKEGDRIEIREKSKNNVQIQRALELSQQTGIAPWVDVDKEKLVGVFQRVPEREEVNIPVEERLVVELYSK

Annotated regions:
phrase: RRLDNVVYRMGFASTRRFARQLVTHGHILVNGKKVNIPSYLVKEGDRIEIREKSKNNVQIQRAL
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: RYTGPVEKIERRLGVSLELKGERRLAGKSALDKRPYAPGQHGQRRTKISEYGLQLREKQKIKFYYGVLEKQFRKFFREANRQEGNTGENLIKLL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: RYTGPVEKIERRLGVSLELKGERRLAGKSALDKRPYAPGQHGQRRTKISEYGLQLREKQKIKFYYGVLEKQFRKFFREANRQEGNTGENLIKLL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: LERRLDNVVYRMGFASTRRFARQL
type: CONSERVED_SITE
name: Ribosomal_uS4_CS
description: Small ribosomal subunit protein uS4, conserved site

phrase: RRLDNVVYRMGFASTRRFARQLVTHGHILVNGKKVNIPSYLVKEGDR
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain
Protein sequence:
MKKVYIKTFGCQMNEYDSDKMADVLGSAEGMVKTDNPEEADVILFNTCSVREKAQEKVFSDLGRIRPLKEANPDLIIGVGGCVASQEGDAIVKRAPFVDVVFGPQTLHRLPDLIESRKQSGRSQVDISFPEIEKFDHIPPAKVDGGAAFVSIMEGCSKYCSFCVVPYTRGEEVSRPFEDVLTEIAGLAAQGVKEITLLGQNVNAYRGLMSDGEIADFALLLEYVHEVPGVERIRFTTSHPREFSQRIIDCYAKLPKLVSHLHLPVQSGSDRVLMAMKRGYTGLEYKSIIRKLRAIRPDLCLSSDFIIGFPGETEADFEQTLKLVRDCEFDFSFVFIYSPRPGTPAANLPDDTPHAEKVRRLEALNEVIEAKGYAINQSMVGTVQRVLVENVSKKDATMLAARTANNRVVNFAGHPRLLGRMIEVKITAAFPHSLAGEALTSESA

Annotated regions:
phrase: VSIMEGCSKYCSFCVVPYTRGEEVSRPFEDVLTEIAGLAAQGVKEITLLGQNVNAYRGLMSDGEIADFALLLEYVHEVPGVERIRFTTSHPREFSQRIIDCYAKLPKLVSHLHLPVQSGSDRVLMAMKRGYTGLEYKSIIRKLRAIRPDLCLSSDFIIGFPGETEADFEQTLKL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: GAAFVSIMEGCSKYCSFCVVPYTRGEEVSRPFEDVLTEIAGLAAQGVKEITLLGQNVNAYRGLMSDGEIADFALLLEYVHEVPGVERIRFTTSHPREFSQRIIDCYAKLPKLVSHLHLPVQSGSDRVLMAMKRGYTGLEYKSIIRKLRAIRPDLCLSSDFIIGFPGETEADFEQTLKLVRDCEFDFSFVFIYSPRPGTPAANLPDDTPHAEKVRRLEA
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: KKVYIKTFGCQMNEYDSDKMADVLGSAEGMVKTDNPEEADVILFNTCSVREKAQEKVFSDLGRIRPLKEANPDLIIGVGGCVASQEGDAIVKRAPFVDVVFGPQTLHRLPDLIESRK
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: MKKVYIKTFGCQMNEYDSDKMADVLGSAEGMVKTDNPEEADVILFNTCSVREKAQEKVFSDLGRIRPLKEANPDLIIGVGGCVASQEGDAIVKRAPFVDVVFGPQTLHRLPDLIESRKQSGRSQVDISFPEIEKFDHIPPAKVDGGAAFVSIMEGCSKYCSFCVVPYTRGEEVSRPFEDVLTEIAGLAAQGVKEITLLGQNVNAYRGLMSDGEIADFALLLEYVHEVPGVERIRFTTSHPREFSQRIIDCYAKLPKLVSHLHLPVQSGSDRVLMAMKRGYTGLEYKSIIRKLRAIRPDLCLSSDFIIGFPGETEADFEQTLKLVRDCEFDFSFVFIYSPRPGTPAANLPDDTPHAEKVRRLEALNEVIEAKGYAINQSMVGTVQRVLVENVSKKDATMLAARTANNRVVNFAGHPRLLGRMIEVKITAAFPHSLAGEALTS
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VSIMEGCSKYCSFCVVPYTR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: QSMVGTVQRVLVENVSKKDATMLAARTANNRVVNFAGHPRLLGRMIEVKITAAFPHSLAGEAL
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: KVDGGAAFVSIMEGCSKYCSFCVVPYTRGEEVSRPFEDVLTEIAGLAAQGVKEITLLGQNVNAYRGLMSDGEIADFALLLEYVHEVPGVERIRFTTSHPREFSQRIIDCYAKLPKLVSHLHLPVQSGSDRVLMAMKRGYTGLEYKSIIRKLRAIRPDLCLSSDFIIGFPGETEADFEQTLKLVRDCEFDFSFVFIYSPRPGTPAANLPDDTPHAEKVRRLEALNEVIEAKGY
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: QSMVGTVQRVLVENVSKKDATMLAARTANNRVVNFAGHPRLLGRMIEVKITAAFPHSLAGEA
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: KVYIKTFGCQMNEYDSDKMADVLGSAEGMVKTDNPEEADVILFNTCSVREKAQEKVFSDLGRIRPLKEANPDLIIGVGGCVASQEGDAIVKRAPFVDVVF
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal
Protein sequence:
MALLEVCGAPRGLRKACAVPALGSQLRSDPGHYSFSLRAPELAVPRGMQPTEFFQSLGENGEKNIRKEMVHGTTTLAFKFQHGVIVAVDSRATAGNYISSSRVNKVIEINPSLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMVYQYRGMDLSMGSMICGWDKKGPGLYYVDQNGTRLSGNMFSTGSGSTYAYGVMDSGYQPSLSPEEAYELGRRAITYATHRDSYSGGIINMYHMKEDGWVKVESTDVNELLHQYQEANQ

Annotated regions:
phrase: LAFKFQHGVIVAVDSRATAGNYISSSRVNKVIEINPSLLGTMSGCAA
type: CONSERVED_SITE
name: Proteasome_bsu_CS
description: Proteasome beta-type subunit, conserved site
Protein sequence:
MSEPIEKPVEKPGVEPVSDVKDTDPAKKDQPVLVSTTKLTKTQSETLKKLIDELPQILEETGDSSYDEIYGYRINKSGLEHVHDEIRNEIVLKFLIAEEYKFEEARTRLINTFKWRKKFQPLSAAYSETFDKELDDLGVITKYDGTNENLHVVTWNLYGNLKSPKKLFQKFGQDDKAEKEGSPFLRWRIGLMERALSLIDFTDKSNSKIAQVHDYNNVSMFRMDPGMKAATKEIIKIFGDNYPELLSTKFFINVPTIMSWVFTFFRTIGLVSEDTWKKFQVLNSGNLATWFGEKNLPKAYNGSNDSTVESLFASEAKTEAPEYAKIMIHKAALDID

Annotated regions:
phrase: LFQKFGQDDKAEKEGSPFLRWRIGLMERALSLIDFTDKSNSKIAQVHDYNNVSMFRMDPGMKAATKEIIKIFGDNYPELLSTKFFINVPTIMSWVFTFFRTIGLVSEDTWKKFQVLNSGNLATWFGEKNLPKAYNG
type: DOMAIN
name: CRAL-TRIO_dom
description: CRAL-TRIO lipid binding domain

phrase: LFQKFGQDDKAEKEGSPFLRWRIGLMERALSLIDFTDKSNSKIAQVHDYNNVSMFRMDPGMKAATKEIIKIFGDNYPELLSTKFFINVPTIMSWVFTFFRTIGLVSEDTWKKFQVLNSGNLATWFGEKNLPKAYNGSNDST
type: DOMAIN
name: CRAL-TRIO_dom
description: CRAL-TRIO lipid binding domain

phrase: FGQDDKAEKEGSPFLRWRIGLMERALSLIDFTDKSNSKIAQVHDYNNVSMFRMDPGMKAATKEIIKIFGDNYPELLSTKFFINVPTIMSWVFTFFRTIGLVSEDTWKKFQVLNSGNLATWFGEKNLPKAYN
type: DOMAIN
name: CRAL-TRIO_dom
description: CRAL-TRIO lipid binding domain

phrase: ENLHVVTWNLYGNLKSPKKLFQKFGQDDKAEKEGSPFLRWRIGLMERALSLIDFTDKSNSKIAQVHDYNNVSMFRMDPGMKAATKEIIKIFGDNYPELLSTKFFINVPTIMSWVFTFFRTIGLVSEDTWKKFQVLNSGNLATWFGEKNLPKAYNGSN
type: DOMAIN
name: CRAL-TRIO_dom
description: CRAL-TRIO lipid binding domain
Protein sequence:
MSKAMISRENYLQQLIQFKDTDFIKVISGVRRSGKSVLLMQYRDYLQQQGIASENILYLNFESFEYQWVKDAQDFQQLIQEKMPSSQEKIYFLIDEIQFVEGWQKIVNALRVSFNTDIVITGSNANLLSGELATLLSGRYVEIKIYPLSFKEFLHAKNVDSQSRLVDKLYSEYEKYGGFPSVVMADEPLKETILSGIFDSIVLNDIAHRAGVKDTHILKSVILFLADNVGQLVNPSKISNTLTSERVPTSNHTISKYLDLLENAFLFYKAKQYDIRGKGYLKTNAKYFIVDNGLRRHAIGKKGANYANRLENIVFIELLRRGYSVDVGKLDSKEIDFIARKADEILYVQVAFEIPENTHETDNLLHIKDNYKKILITGKYYEQTEIDGIEVIYVVDWLLQ

Annotated regions:
phrase: IKVISGVRRSGKSVLLMQYRDYLQQQGIASENILYLNFESFEYQWVKDAQDFQQLIQEKMPSSQEKIYFLIDEIQFVEGWQKIVNALRVSFNTDIVITGSNANLLSGELATLLSGRYVEIKIYPLSFKEF
type: DOMAIN
name: AAA_14
description: AAA domain, group 14

phrase: NDIAHRAGVKDTHILKSVILFLADNVGQLVNPSKISNTLTSERVPTSNHTISKYLDLLENAFLFYKAKQYDIRGKGYLKTNAKYFIVDNGLRRHAIGKKGANYANRLENIVFIELLRRGYSVDVGKLDSKEIDFIARKADEILYVQ
type: DOMAIN
name: DUF4143
description: Domain of unknown function DUF4143
Protein sequence:
MSANNNMESEIKEIESISFGMMSSEDIRQMSSFEVKTAKISSTNLLETVHDPKSGPIGSAPCETCHQNEWDCPGHFGHIELNVPIIHPLFINHVVNILKIFCWKCNEFLLTKDHLELNNILKLEKEKKFNAVLEKIKKCDRCVHCTTPRADYKLVLNDITYKTIYRTFSYQGGAVKTARDKKLNESREIVSAEMVKKIFDNIKLEYVEMLGISHPKDFCLEVFPVIPSCCRPHEVQDGNINDDDLTYQLMEIVKNNSMIGAIKLEKESMEKQYPECLKVKEILLLSNVEKQKKEIDDFLKKPIKNGLKTKKKINKEEITPLDQYLKLHDKYVKYVNNLKFRIETYCNNSQGKATHATTGRAIKGLRERLTGKEGQIRNNLLGKRCEMSARTVIGPDPTLKIDEVIVPKEIAQSLTFPDFVNKHNIDRLTKLVNSGNAIRLVKKNESGQEIKINLAAAINNHGTPLQHDDIIKRPKITNNHEEKHNYEEKHNFDTFETIVIKDPKNFVLKEGDILFRNNFQQKVVLPSKKFIKLEEGWIVHRYLQNGDILVLNRQPTLHKASMMALRVKIMDVKTFKFNLACTKPYNADFDGDEMNAHAPQSEESKAELFTLSTPKQCIMSCQSGKPNLTIVQDSLTGAYLMSKENNNDATLTNGEFNDILMVLTQNDEYNGDVVDYFLKRKEDVSNTLKKLGFSGTVLNGKGLLSLLFPNDLYINEEDLKINRGVIYDGCLTKKYLSSTESSLIKILYKEYGVETCATFLNNIQFLTNRWLMISSFSIHAGDCIKQKEVLGTVEQCLMESEKIKMTTQNPFIREQKIMQTLSNAKDVGMKIAKDALKRDNVNLHAQNNFLTTVESGSKGDHLNIAQITSLLGQQITEGQRVKPLLSNGKRTLPHYILKEENNDTEHFHDLLEEYESQGFISSSFAQGLNPKEFFFHCMAGRQGVCDTAMSTATSGYIMRRNVKLTEDIKVAYDGTVQDTRGRRFQMAYGELGYDPSKLVKVNGKPEVCNIARLVNKLNCNFEDNIK

Annotated regions:
phrase: GLNPKEFFFHCMAGRQGVCDTAMSTATSGYIMRRNVKLTEDIKVAYDGTVQDTRGRRFQMAYG
type: DOMAIN
name: RNA_pol_Rpb1_5
description: RNA polymerase Rpb1, domain 5

phrase: KDFCLEVFPVIPSCCRPHEVQDGNINDDDLTYQLMEIVKNNSMIGAIKLEKESMEKQYPECLKVKEILLLSNVEKQKKEIDDFLKKPIKNGLKTKKKINKEEITPLDQYLKLHDKYVKYVNNLKFRIETYCNNSQGKATHATTGRAIKGLRERLTGKEGQIRNNLLGKRCEMSARTVIGPDPTLKIDEVIVPKEIAQSLTFPDFVNKHNIDRLTKLVNSGNAIRLVKKNESGQEIKINLAAAINNHGTPLQHDDIIKRPKITNNHEEKHNYEEKHNFDTFETIVIKDPKNFVLKEGDILFRNNFQQKVVLPSKKFIKLEEGWIVHRYLQNGDILVLNRQPTLHKASMMALRVKIMDVKTFKFNLACTKPYNADFDGDEMNAHAPQSEESKAELFTLSTPKQCIMSCQSGKPNLTIVQDSLTGAYLM
type: DOMAIN
name: RNA_pol_N
description: RNA polymerase, N-terminal

phrase: CIMSCQSGKPNLTIVQDSLTGAYLMSKENNNDATLTNGEFNDILMVLTQNDEYNGDVVDYFLKRKEDVSNTLKKLGFSGTVLNGKGLLSLLFPNDLYINEEDLKINRGVIYDGCLTKKYLSSTESSLIKILYKEYGVETCATFLNNIQFLTNRWLMISSFSIHAGD
type: DOMAIN
name: RNA_pol_Rpb1_3
description: RNA polymerase Rpb1, domain 3

phrase: GKRCEMSARTVIGPDPTLKIDEVIVPKEIAQSLTFPDFVNKHNIDRLTKLVNSGNAIRLVKKNESGQEIKINLAAAINNHGTPLQHDDIIK
type: DOMAIN
name: RNA_pol_asu
description: RNA polymerase, alpha subunit

phrase: KKFIKLEEGWIVHRYLQNGDILVLNRQPTLHKASMMALRVKIMDVKTFKFNLACTKPYNADFDGDEMNAHAPQSEESKAELFT
type: DOMAIN
name: RNA_pol_asu
description: RNA polymerase, alpha subunit

phrase: IREQKIMQTLSNAKDVGMKIAKDALKRDNVNLHAQNNFLTTVESGSKGDHLNIAQITSLLGQQITEGQRVKPLLSNGKRTLPHYILKEENNDTEHFHDLLEEYESQGF
type: DOMAIN
name: RNA_pol_Rpb1_4
description: RNA polymerase Rpb1, domain 4

phrase: KEIESISFGMMSSEDIRQMSSFEVKTAKISSTNLLETVHDPKSGPIGSAPCETCHQNEWDCPGHFGHIELNVPIIHPLFINHVVNILKIFCWKCNEFLLTKDHLELNNILKLEKEKKFNAVLEKIKKCDRCVHCTTPRADYKLVLNDITYKTIYRTFSYQGGAVKTARDKKLNESREIVSAEMVKKIFDNIKLEYVEMLGISHPKDFCLEVFPVIPSCCRPHEVQDGNINDDDLTYQLMEIVKNNSMIGAIKLEKESMEKQYPECLKVKEILLLSNVEKQKKEIDDFLKKPI
type: DOMAIN
name: RNA_pol_Rpb1_1
description: RNA polymerase Rpb1, domain 1
Protein sequence:
MNMAKMIKVKQTKSAIGRLPKHKATLTGLGLRRIGHVRELEDTPSVRGMINRVFYMVEVVEE

Annotated regions:
phrase: TLTGLGLRRIGHVRELEDTPSVRGMINRVFYM
type: CONSERVED_SITE
name: Ribosomal_uL30_CS
description: Large ribosomal subunit protein uL30, conserved site

phrase: IKVKQTKSAIGRLPKHKATLTGLGLRRIGHVRELEDTPSVRGMINRVFYM
type: DOMAIN
name: Ribosomal_uL30_ferredoxin-like
description: Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain