nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MGKPTLLEPGHLYNVPAEHKNDVPIHYIITWIKQRLPEFGGAIPTSLADRVLIIKSRTGSGKSTALPVHVFRILRNENTHSFQKYLGRSVICTQPRVLTAVTLAKDIGASTHYPDMILGQTVGYHTKPLTEKPNRGLIYATAGVLLAQLHTMTDDEIASRYAFMIIDEAHERALGIDLMLMYIKSMLQRMLQRGSIGALRIPFVILTSATIDTHKYSTYFGIGKENIILVEGRQYGVETHWPLYNTNNYIKTACETALTIHKENIHDRPTEADILIFMPGMAEIRFLSMLLNNANMDLAKEKLPLMLILPIDSEAIAQENEAYLGLKAEIKNLWVKNPLTAKVEKPLRRVIVSTVVAETGLTIETLKYVIDPGWNRSIETYYPEWAGGLITRPAAQSRIEQRKGRVGRVFPGHFYPLYTKHVFEQIPAQQYPEIITEGPGAIFLSIVVETIKKNKEGVFKAEEIDMLDPPPTDALASAIERAIVAGLLTRGEKGLQLTQLGDIASRFSFLSIEEARMCFSGYFWQAAISDIATILAVVSVADKKLTNLLDSKQRNGAMLAEAVLAGIPPFLQNIDNAYTNIHLLLADDLLEGLFIFEGFQHAIVYFINNKVNNVAKHLREWCEKKMLKYSSMVQILARREDILNELAIVGLNPFHQWQNRLASANAETFLKRVCTLKQCMYEAYRLNCFCYDKHRLLYTGRNGIHFSYHDAVIKNPSCIVTPRIMLSPVSKQYMEWRLEPSFVSVLDGFVNVDINFLSPRQEIPNILGGVEDEEEEPPLPIQVFLHKYVKTHFHFSGKSFKELKMKPSQMIKFPETTLINMIPDIPKNVVQTYLEINVCHQYSFKRLIYCETFYTDMDDVQHENSVELIGLPMAAHHLTINDFNKLYHLLKPDGFLIVYDLHKGQEAFWLHSLQDALGHHTIRRDMDFHTIPEWETIFKECGFTPIFSKQPSEHELFIVFKK

Annotated regions:
phrase: AFMIIDEAH
type: CONSERVED_SITE
name: DNA/RNA_helicase_DEAH_CS
description: DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site

phrase: LYNVPAEHKNDVPIHYIITWIKQRLPEFGGAIPTSLADRVLIIKSRTGSGKSTALPVHVFRILRNENTHSFQKYLGRSVICTQPRVLTAVTLAKDIGASTHYPDMILGQTVGYHTKPLTEKPNRGLIYATAGVLLAQLHTMTDDEIASRYAFMIIDEAHERALGIDLMLMYIKSMLQRMLQRGSIGALRIPFVILTSATIDTHKYSTYFGIGKENIILVEGRQYGVET
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: RFLSMLLNNANMDLAKEKLPLMLILPIDSEAIAQENEAYLGLKAEIKNLWVKNPLTAKVEKPLRRVIVSTVVAETGLTIETLKYVIDPGWNRSIETYYPEWAGGLITRPAAQSRIEQRKGRVGRV
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: ACETALTIHKENIHDRPTEADILIFMPGMAEIRFLSMLLNNANMDLAKEKLPLMLILPIDSEAIAQENEAYLGLKAEIKNLWVKNPLTAKVEKPLRRVIVSTVVAETGLTIETLKYVIDPGWNRSIETYYPEWAGGLITRPAAQSRIEQRKGRVGRVFPGHFYPLYTKHVFEQIPAQQYPEIITEGPGAIFLSIVVETIKKNKEGV
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: AIPTSLADRVLIIKSRTGSGKSTALPVHVFRILRNENTHSFQKYLGRSVICTQPRVLTAVTLAKDIGASTHYPDMILGQTVGYHTKPLTEKPNRGLIYATAGVLLAQLHTMTDDEIASRYAFMIIDEAHERALGIDLMLMYIKSMLQRMLQRGSIGALRIPFVILTSATI
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: IPTSLADRVLIIKSRTGSGKSTALPVHVFRILRNENTHSFQKYLGRSVICTQPRVLTAVTLAKDIGASTHYPDMILGQTVGYHTKPLTEKPNRGLIYATAGVLLAQLHTMTDDEIASRYAFMIIDEAHERALGIDLMLMYIKSMLQRMLQRGSIGALRIPFVILTSATIDTHKYSTYFGIGKENII
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain
Protein sequence:
MIVTMKVMKKKNKKLGVSLFIILALIIPCLSYNQLYATVYAGVPVWEEAKPVLFCASDVNLTSTEQHNVWASQACVPTDPTPHEYPLQNVTDNFNIWKNYMVDQMQEDIISLWDQSLKPCVQMTFLCIQMNCTDLPRNSTANSKSTTPSSGSLENPVKQCEFNVTTVLKDKKEKKQALFYVSDLVKAKDSETGGNNTIYTLINCNSTTIKQACPKVSFEPIPIHYCAPAGFAILKCNSTEFNGAGTCHNITVVTCTHGIKPTVSTQLILNGTLSEGKIRMMAKNISDSGQNIIVTLNTTINMTCQRPGHQTVQEIRIGPMAWYSMGLAMGNGSESRRAYCEYNTTNWVKTLKQTAERYLELVNNTGNMSMIFNSSTGGDLEVDQLHFNCHGEFFYCNTSWLFNYTFMCNGTTCESPNINSTNNTLIPCRLRQVVRSWMRGGSGLYAPPIRGNLTCRSNITGMILQMDQPWNMSRQNSTFRPTGGDMKDIWRTELLRYKVVRIKPFSVAPTKITRPVIGFGTRREKRAVGLGMLFLGVLSAAGSTMGAAATALTVRTHTLIKGIVQQQDNLLRAIQAQQQLLRLSVWGIRQLRARLLALETLIQNQQLLNSWGCKGRIVCYTSVKWNWTGDESIWGNLTWQQWDQQIDNVSSTIYEEILKAQIQQEQNEKKLLELDEWASIWNWFDITKWLWYIKIAIIIVGALIGLRIVMVVLNLVRNIRQGYQPLSLQIPTHHQSEAGTPGRTGEGGGEEGRPRLIPSQQGFLQLLY

Annotated regions:
phrase: MGAAATALTVRTHTLIKGIVQQQDNLLRAIQAQQQLLRLSVWGIRQLRARLLALETLIQNQQLLNSWGCKGRIVCYTSVKWNWTGDESIWGNLTWQQWDQQIDNVSSTIYEEILKAQIQQEQNEKKLLELDEWASIWNWFDITKWLWYIKIAIIIVGALIGLRIVMVVLNLVRNIRQGYQPLSLQI
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: VRTHTLIKGIVQQQDNLLRAIQAQQQLLRLSVWGIRQLRARLLALETLIQNQQLLNSWGCKGRIVCYTSVKWNWTGDESIWGNLTWQQWDQQIDNVSSTIYEEILKAQIQQEQNEKKLLEL
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LYATVYAGVPVWEEAKPVLFCASDVNLTSTEQHNVWASQACVPTDPTPHEYPLQNVTDNFNIWKNYMVDQMQEDIISLWDQSLKPCVQMTFLCIQMNCTDLPRNSTANSKSTTPSSGSLENPVKQCEFNVTTVLKDKKEKKQALFYVSDLVKAKDSETGGNNTIYTLINCNSTTIKQACPKVSFEPIPIHYCAPAGFAILKCNSTEFNGAGTCHNITVVTCTHGIKPTVSTQLILNGTLSEGKIRMMAKNISDSGQNIIVTLNTTINMTCQRPGHQTVQEIRIGPMAWYSMGLAMGNGSESRRAYCEYNTTNWVKTLKQTAERYLELVNNTGNMSMIFNSSTGGDLEVDQLHFNCHGEFFYCNTSWLFNYTFMCNGTTCESPNINSTNNTLIPCRLRQVVRSWMRGGSGLYAPPIRGNLTCRSNITGMILQMDQPWNMSRQNSTFRPTGGDMKDIWRTELLRYKVVRIKPFSVAPTKIT
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MAIFYSEKTAKQTAKNCCKTTARQIVNIHSLDYQGLDVAKINGKTWFIENALPNEQVLIHVIEEKRQYGRAKANKILQASPLRQQPSCISYPQCGGCQMQHIKLDVQRQTKQQAFFKQLQRLQTEPIDWQPMISGQDKHYRRRTKLSMAIQRNQLVIGFRQQNTHQIIPLTDCEVLEQPLSTLLPKLQHLFAGWKMKKALGHIELVNADNTRAMLVLHIGKINAQDQHMLLNFAKAEQLSLYLMCDENHIEHLCGEAPYYQINGLTLHFCIRDFIQVNQPLNQKMVNKALEWLAITAEDRILDLFCGIGNFSLPIAQQAGFVVGVEGVEEMVKQAKINQQTSGLNNIAFYQTNLAESFVDQHWATQPFNKVLLDPARQGALFCLDHLMALTPERIIYISCNPATLMRDAEKLIRHGYKIAKSAVIDMFPHTGHLESISMFIK

Annotated regions:
phrase: IDMFPHTGHL
type: CONSERVED_SITE
name: MeTrfase_TrmA_CS
description: RNA methyltransferase TrmA, conserved site

phrase: VNIHSLDYQGLDVAKINGKTWFIENALPNEQVLIHVIEEKRQYGRA
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: DPARQGALFCLDHLMALTPERIIYISCNPA
type: ACTIVE_SITE
name: MeTrfase_TrmA_AS
description: RNA methyltransferase TrmA, active site
Protein sequence:
MDLRSELLKSIWYAFTALDVEKSGKVSKSQLKVLSHNLYTVLKIPHEAAALEEHFRDDDDGPVSSQGYMPYLNKYILDKVVEGTFVKENVDELCWTLTAKKNYRPEGKSILPAKDAFRLWCLFIFLSEDRYPLVMIPDEVEYLLKKFCMAMSVELNYVELEDFISQDSVQQNGFTVWTFLEMMNSGKLTRGIAKETVSMAIEEVYREIVGDVLKEGYLWKKGQLRRNWTERWFTLRPSTLLYFTSEDRKDHKGNIQLDGNCCVEVLPDRDGKRCMFCLKTLTKTYELSASDTKQRQEWTTAIQTAIRLYVEGKTSLHKDLKLKRRDQREQREKRREAKEQELQRLRALQEERERKMAELELLKEAQRQAQAMLEQDEQRRRQQHEQLHQALEIQLKEAEEARASMQAEMALKEAEAEKQRTRIRELEAMQQRLEDALQQEIKARQDEEAFRYAQARLLAEEEEKMKALMGLREEQEEYIQRAQREKQELRQEMESKSRALEEAQRQLEETRANRYRVDQDVVAAQRKLRQASTNVKHWNVQMNRLMHPIGPGEKRSSGGSFSSFRIPSQKDPALRQKQKSEEQDEESKENMESRGGCEADRRLSTNGQMEIP

Annotated regions:
phrase: VLKEGYLWKKGQLRRNWTERWFTLRPSTLLYFTSEDRKDHKGNIQLDGNCCVEVLPDRDGKRCMFCLKTLTKTYELSASDTKQRQEWTTAIQTAIRL
type: DOMAIN
name: PH_domain
description: Pleckstrin homology domain

phrase: VLKEGYLWKKGQLRRNWTERWFTLRPSTLLYFTSEDRKDHKGNIQLDGNCCVEVLPDRDGKRCMFCLKTLTKTYELSASDTKQRQEWTTAIQTAI
type: DOMAIN
name: PH_domain
description: Pleckstrin homology domain

phrase: DVLKEGYLWKKGQLRRNWTERWFTLRPSTLLYFTSEDRKDHKGNIQLDGNCCVEVLPDRDGKRCMFCLKTLTKTYELSASDTKQRQEWTTAIQTAI
type: DOMAIN
name: PH_domain
description: Pleckstrin homology domain
Protein sequence:
MEFKNTLEFARELDKKDTLAKYRTEFNFPKVNGKEVIYFTGNSLGLQSNRSVDYVKEVMDDWANLAVEGHFFADKPWWDYHERFSSPLSKLVGAKPSEVTVMNTLTVNLHLLMASFYRPTQKKFKILCEEKAFPSDQYMIQSQVQFHGLDPKDTIVEIKRRDGEHNFRIEDILAKIDEVGDELSLVLIGGLNYYTGQVLDMKTITAKAHEYDAYVGWDLAHAAGNIKLELHEWGADFAAWCSYKYMNSGPGNASGCFIHEKHHNNMDLPRLGGWWGHNKERRFLMEPKYDPIQSAHGWQISNLPILSLAPYLASVEMFDEIGMDKLVEKRDVITSYLEFILKEVARETNANFEIITPSDPKERGSQLSVLLHGEGRRLFDYLMEEGVIVDWREPNVIRLAPVPLYTSYEDMYHFGQILKNGVKS

Annotated regions:
Protein sequence:
MTDASPVRATTPRQVRPATEGWSQKKDTEGRPLLQFASPKRGKPPVHLADLTPEQRVEKVKELGLPGFRAAQLEKHYFTHYTSDPALMTDLPAVSREELVAGMLPQLLTEVRTLKTDRGDTIKFLWKLHDGALVESVLMRYPGRITLCVSSQAGCGMNCPFCATGQAGLTRNMSAAEIVEQIVRANRIIRDGGLGPAEHPDERVTNIVFMGMGEPLANYARVMQAIRVMTDQKHGLGMSARGITVSTVGLVPAIRKLAEEDIPVTFALSLHAPDDHLRDELIPVNSRWKVDEALDAARNYFEKTGRRVSIEYALIKDMNDHGWRADLLAEKLNARGRGWVHVNPIPLNPTPGSIWTASETAVQREFVRRLNDAGIPTTLRDTRGKEIDGACGQLVATAEDEAQAADTPLGSDHS

Annotated regions:
phrase: SSQAGCGMNCPFCATGQAGLTRNMSAAEIVEQIVRANRIIRDGGLGPAEHPDERVTNIVFMGMGEPLANYARVMQAIRVMTDQKHGLGMSARGITVSTVGLVPAIRKLAEEDIPVTFALSLHAPDDHLRDELIPVNSRWKVDEALDAARNYFEKTGRRVSIEYALIKDMNDH
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: YPGRITLCVSSQAGCGMNCPFCATGQAGLTRNMSAAEIVEQIVRANRIIRDGGLGPAEHPDERVTNIVFMGMGEPLANYARVMQAIRVMTDQKHGLGMSARGITVSTVGLVPAIRKLAEEDIPVTFALSLHAPDDHLRDELIPVNSRWKVDEALDAARNYFEKTGRRVSIEYALIKDMNDHGWRADLLAEKLNARGRGWVHVNPIPLNPTPGSIWTASETAVQREFVRRLNDAGIPTTLRDTRGK
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: ITLCVSSQAGCGMNCPFCATGQAGLTRNMSAAEIVEQIVRANRIIRDGGLGPAEHPDERVTNIVFMGMGEPLANYARVMQAIRVMTDQKHGLGMSARGITVSTVGLVPAIRKLAEEDIPVTFALSLHAPDDHLRDELIPVNSRWKVDEALDAARNYFEKTGRRVSIEYALIKDMNDHGWRADLLAEKLNARGRGWVHVNPIPLNPTPGSIWTASETAVQREFVRRLN
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain
Protein sequence:
MAIDVFYDDDADLSIIQGRKVAIIGYGSQGHAHAQNLRESGVEVAIGLREGSKSREKAEEAGFKVLNNAEASEWADVIMLLAPDTSQAQIYENDIAPNLKDGDALFFGHGLNIHFGMIKPEDNITIGMVAPKGPGHLVRRQYVDGKGVPCLIAVEQDPKGNGRDLALSYAAAIGGGRAGVIPTTFEAETVTDLFGEQAVLCGGTEELIKTGFEVLVEAGYEPEMAYFECLHELKLIVDLIFEGGIKNMNYSVSDTAEFGGYISGPRVIDADTKERMKGILSDIQDGTFTKRLVANVEGGNKELEELRASYNDHEIEKTGEKLRDLMSWVKNPLNETA

Annotated regions:
phrase: IQGRKVAIIGYGSQGHAHAQNLRESGVEVAIGLREGSKSREKAEEAGFKVLNNAEASEWADVIMLLAPDTSQAQIYENDIAPNLKDGDALFFGHGLNIHFGMIKPEDNITIGMVAPKGPGHLVRRQYVDGKGVPCLIAVEQDPKGNGRDLALSYAAAIGGGRA
type: DOMAIN
name: KARI_N
description: Ketol-acid reductoisomerase, N-terminal

phrase: FEAETVTDLFGEQAVLCGGTEELIKTGFEVLVEAGYEPEMAYFECLHELKLIVDLIFEGGIKNMNYSVSDTAEFGGYISGPRVIDADTKERMKGILSDIQDGTFTKRLVANVEGGNKELEELRASYNDHEIEKTGEKLRDLMS
type: DOMAIN
name: KARI_C
description: Ketol-acid reductoisomerase, C-terminal

phrase: IDVFYDDDADLSIIQGRKVAIIGYGSQGHAHAQNLRESGVEVAIGLREGSKSREKAEEAGFKVLNNAEASEWADVIMLLAPDTSQAQIYENDIAPNLKDGDALFFGHGLNIHFGMIKPEDNITIGMVAPKGPGHLVRRQYVDGKGVPCLIAVEQDPKGNGRDLALSYAAAIGGGRAGVIP
type: DOMAIN
name: KARI_N
description: Ketol-acid reductoisomerase, N-terminal

phrase: TFEAETVTDLFGEQAVLCGGTEELIKTGFEVLVEAGYEPEMAYFECLHELKLIVDLIFEGGIKNMNYSVSDTAEFGGYISGPRVIDADTKERMKGILSDIQDGTFTKRLVANVEGGNKELEELRASYNDHEIEKTGEKLRDLMSW
type: DOMAIN
name: KARI_C
description: Ketol-acid reductoisomerase, C-terminal
Protein sequence:
MAILSIVSIFAAEKSYSIPPASNKLLASPALNPLYDAKADAEINVWCDEFLKLQPGSEKSVFIRESRLGLLAAYAYPSISYEKIVPVAKFIAWLFLADDILDNPEISSSDMRNVATAYKMVFKGRFDEAALLVKNQELLRQVKMLSEVLKELSLHLVDKSGRFMNSMTKVLDMFEIESNWLHKQIVPNLDTYMWLREITSGVAPCFAMLDGLLQLGLEERGVLDHPLIRKVEEIGTHHIALHNDLISFRKEWAKGNYLNAVPILASIHKCGLNEAIAMLASMVEDLEKEFIGTKQEIISSGLARKQGVMDYVNGVEVWMAANAEWGWLSARYHGIGWIPPPEKSGTFQL

Annotated regions:
Protein sequence:
MGACDIVTEANISSDIDSNATGVTAFSMPGWQLALWATAYLALVLVAVVGNATVIWIILAHRRMRTVTNYFIVNLALADLCMATFNAAFNFVYASHNIWYFGRAFCYFQNLFPITAMFVSIYSMTAIAADRYMAIVHPFQPRLSGPGTKAVIAGIWLVALALAFPQCFYSTITMDQGATKCVVAWPEDSGGKMLLLYHLTVIALIYFLPLVVMFVAYSVIGFKLWRRTVPGHQTHGANLRHLRAKKKFVKTMVLVVVTFAVCWLPYHLYFLLGHFQDDIYCRKFIQQVYLVLFWLAMSSTMYNPIIYCCLNHRFRSGFRLAFRCCPWVTPTEEDKLELTHTPSLSVRVNRCHTKETLFLVGDVAPSEAANGQAGGPQDGGAYDF

Annotated regions:
phrase: GNATVIWIILAHRRMRTVTNYFIVNLALADLCMATFNAAFNFVYASHNIWYFGRAFCYFQNLFPITAMFVSIYSMTAIAADRYMAIVHPFQPRLSGPGTKAVIAGIWLVALALAFPQCFYSTITMDQGATKCVVAWPEDSGGKMLLLYHLTVIALIYFLPLVVMFVAYSVIGFKLWRRTVPGHQTHGANLRHLRAKKKFVKTMVLVVVTFAVCWLPYHLYFLLGHFQDDIYCRKFIQQVYLVLFWLAMSSTMYNPII
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM
Protein sequence:
MTTVNLLDFDLDGLAAYCEQLGEKRFRAVQLFRWIHQKGASSFDQMTDLARSLREKLPALCHVQDLPVLSRQASADGTIKWLFDVGGGNAVETVFIPEEDRGTLCISSQAGCAVGCRFCSTGHQGFSRNLTTGEILAQLWHAEHYLRNHLKSSDRVITNVVMMGMGEPLQNYASLVPALKVMLDDHGYGLSRRRVTVSTSGVVPMIERLAKDVPVALAVSLHAPTDALRDSLVPLNLKYPIAELLDACRAYLPAAPRDFITFEYCMLDGVNDQPEHARALLDLLKGRHGHRGIPCKINLIPFNPFPDSGLLCSPRPVVQAFWKILNDGGLVTTVRKTRGDDIDAACGQLAGDVLDRTDAARRLAQRRESVDPNAPRPIRFVKQIKEQQA

Annotated regions:
phrase: EEDRGTLCISSQAGCAVGCRFCSTGHQGFSRNLTTGEILAQLWHAEHYLRNHLKSSDRVITNVVMMGMGEPLQNYASLVPALKVMLDDHGYGLSRRRVTVSTSGVVPMIERLAKDVPVALAVSLHAPTDALRDSLVPLNLKYPIAELLDACRAYLPAAPRDFITFEYCMLDGVNDQPEHARALLDLLKGRHGHRGIPCKINLIPFNPFPDSGLLCSPRPVVQAFWKILNDGGLVTTVRKTRGD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TVNLLDFDLDGLAAYCEQLGEKRFRAVQLFRWIHQKGASSFDQMTDLARSLREKLPALCHVQDLPVLSRQASADGTIKWLFDVGGGNAVETVFIPEEDRGTLCISSQAGCAVGCRFCSTGHQGFSRNLTTGEILAQLWHAEHYLRNHLKSSDRVITNVVMMGMGEPLQNYASLVPALKVMLDDHGYGLSRRRVTVSTSGVVPMIERLAKDVPVALAVSLHAPTDALRDSLVPLNLKYPIAELLDACRAYLPAAPRDFITFEYCMLDGVNDQPEHARALLDLLKGRHGHRGIPCKINLIPFNPFPDSGLLCSPRPVVQAFWKILNDGGLVTTVRKTRGDDIDAACGQLAGDVLDRTDA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VNLLDFDLDGLAAYCEQLGEKRFRAVQLFRWIHQKGASSFDQMTDLARSLREKLPALC
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: SSQAGCAVGCRFCSTGHQGFSRNLTTGEILAQLWHAEHYLRNHLKSSDRVITNVVMMGMGEPLQNYASLVPALKVMLDDHGYGLSRRRVTVSTSGVVPMIERLAKDVPVALAVSLHAPTDALRDSLVPLNLKYPIAELLDACRAYLPAAPRDFITFEYCMLDGVNDQPE
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MAVQAYRSLKKYETFSYLPQMTPEQVRRQIAHAIAQGWNPAVEHTEKGTPAKASYWYMWKLPLFGEQSVDAVVAEIEACHREFPDQMVRFVAYDNYAQSQGMAFVVYR

Annotated regions:
phrase: YETFSYLPQMTPEQVRRQIAHAIAQGWNPAVEHTEKGTPAKASYWYMWKLPLFGEQSVDAVVAEIEACHREFPDQMVRFVAYDNYAQSQGMAFVVY
type: DOMAIN
name: RuBisCO_ssu_dom
description: Ribulose bisphosphate carboxylase small subunit, domain

phrase: KKYETFSYLPQMTPEQVRRQIAHAIAQGWNPAVEHTEKGTPAKASYWYMWKLPLFGEQSVDAVVAEIEACHREFPDQMVRFVAYDNYAQSQGMAFVVY
type: DOMAIN
name: RuBisCO_ssu_dom
description: Ribulose bisphosphate carboxylase small subunit, domain

phrase: KKYETFSYLPQMTPEQVRRQIAHAIAQGWNPAVEHTEKGTPAKASYWYMWKLPLFGEQSVDAVVAEIEACHREFPDQMVRFVAYDNYAQSQGMAFVVY
type: DOMAIN
name: RuBisCO_ssu_dom
description: Ribulose bisphosphate carboxylase small subunit, domain

phrase: KYETFSYLPQMTPEQVRRQIAHAIAQGWNPAVEHTEKGTPAKASYWYMWKLPLFGEQSVDAVVAEIEACHREFPDQMVRFVAYDNYAQSQGMAFVVY
type: DOMAIN
name: RuBisCO_ssu_dom
description: Ribulose bisphosphate carboxylase small subunit, domain
Protein sequence:
MDKKVTEVVEALAQPIVEELNLELVDVEYVKEGKDWFLRVFIDSETGVDIEECGAVSERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFEQAVGSQVAIKTYEPIDGEKMFEGKLLSYDGTTITLLLTIKTRKKEIQIPMDKVANARLAVTF

Annotated regions:
phrase: LKKEKDFEQAVGSQVAIKTYEPIDGEKMFEGKLLSYDGTTITLLLTIKTRKKEIQIPMDKVANARLAVT
type: DOMAIN
name: RimP_C
description: Ribosome maturation factor RimP, C-terminal

phrase: AQPIVEELNLELVDVEYVKEGKDWFLRVFIDSETGVDIEECGAVSERLSEALDKEDPIPHLYFLDVSSPGA
type: DOMAIN
name: RimP_N
description: Ribosome maturation factor RimP, N-terminal

phrase: GAERPLKKEKDFEQAVGSQVAIKTYEPIDGEKMFEGKLLSYDGTTITLLLTIKTRKKEIQIPMDKVANARLAVT
type: DOMAIN
name: RimP_C
description: Ribosome maturation factor RimP, C-terminal
Protein sequence:
MIDRYKHQQLRIGSVSPQQISAWAKKILPNGEMVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGDKKEDPKFCEQCGVEFVDSRVRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDFLFARPVAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQGFDTFRNREISTGAGAIREQLADLDLRLITDSSLVEWKELGEEGATGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEPERMVLCLLPVLPPELRPIIQIDGGKPMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDSHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHAASNIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAIFLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLMGLYVLTTGNHRGICANRYNPSNHRNYQNEKIDDNNYKYTKEPYFCSSYDALGAYRQKRIYLDSPLWLRWRLDQRVIASREVPIEVQYESLGTYHEIYGHYLIVRNVKKEILCIDIRTTVGHISFYREIEEAIQGFCRACSYGT

Annotated regions:
phrase: QLRIGSVSPQQISAWAKKILPNGEMVGEVTKPYTFHYKTNKPEKDGLFCERIFGPIKSGICACGNYRVIGDKKEDPKFCEQCGVEFVDSRVRRYQMGYIKLACPVTHVWYLKRLPSYIANLLDKPLKELEGLVYCDFLFARPVAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQGFDTFRNREISTGAGAIREQLADLDLRLITDSSLVEWKELGEEGATGNEWEDRKIGRRKDFLVRRMELAKHFIRTNVEPERMVLCLLPVLPPELRPIIQIDGGKPMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDSHNKVYKSFSDVIEGKEGRFRET
type: DOMAIN
name: RNA_pol_Rpb1_1
description: RNA polymerase Rpb1, domain 1

phrase: ERMVLCLLPVLPPELRPIIQIDGGKPMSSDINELYRRVIYRNNTLTDLLTTSRSTPGELVMCQEKLVQEAVDTLLDNGIRGQPMRDSHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHAASNIGVAKSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAIFLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLLMFSHMNLLSPAIGDPISVPTQDMLMGLYVL
type: DOMAIN
name: RNA_pol_N
description: RNA polymerase, N-terminal

phrase: GKRVDYSGRSVIVVGPSLSLHRCGLPREIAIELFQTFVIRGLIRQHA
type: DOMAIN
name: RNA_pol_asu
description: RNA polymerase, alpha subunit

phrase: KSKIREKEPIVWEILQEVMQGHPVLLNRAPTLHRLGIQAFQPILVEGRAIFLHPLVCKGFNADFDGDQMAVHVPLSLEAQAEARLL
type: DOMAIN
name: RNA_pol_asu
description: RNA polymerase, alpha subunit
Protein sequence:
MSEVRVRFAPSPTGYLHVGGARTALFNYLYARKTGGKFILRIEDTDLERSEKVFEEQLISALKWLGLEWDEGPDIGGQYGPYRQSERVHLYHEYAQKLIEEGKAYEVYAYPEEIEQLREKLLSEGKAPHYTREMLEPYNTPERKKEYEEKGLKPAVYFSMLRKDYVINDVVKGEVVFKAGSVGDFALLRSNGMPTYNYACVIDDGLMKITHVLRGDDHLSNTVKQVALYEAFGWPTPVFGHVSMILGPDGSKLSKRHGATSVEEFKSRGYLPEALVNFLALLGWSHPEGKEILTKQELIESFSLERLVKNPAIFNPEKLKWMNSEHIRMKSMDELVKIAKPFLQKDVDDEYFAKILHAVKDRIEELSQLPELTDIFFEKPHQLPEKTPEAIETYTNLLSELKKIEKWDKDSIYAAFKTAMKSAKLKGKDFYMTLRLVLTGKTEGPELIDILEILGKDEVIERISLYLNK

Annotated regions:
phrase: ELVKIAKPFLQKDVDDEYFAKILHAVKDRIEELSQLPELTDIFFEKPHQLPEKTPEAIETYTNLLSELKKIEKWDKDSIYAAFKTAMKSAKLKGKDFYMTLRLVLTGKTEGPELIDILEILGKDEVIERI
type: DOMAIN
name: aa-tRNA-synth_I_cd-bd
description: Aminoacyl-tRNA synthetase, class I, anticodon-binding

phrase: PSPTGYLHVGG
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: EVRVRFAPSPTGYLHVGGARTALFNYLYARKTGGKFILRIEDTDLERSEKVFEEQLISALKWLGLEWDEGPDIGGQYGPYRQSERVHLYHEYAQKLIEEGKAYEVYAYPEEIEQLREKLLSEGKAPHYTREMLEPYNTPERKKEYEEKGLKPAVYFSMLRKDYVINDVVKGEVVFKAGSVGDFALLRSNGMPTYNYACVIDDGLMKITHVLRGDDHLSNTVKQVALYEAFGWPTPVFGHVSMILGPDGSKLSKRHGATSVEEFKSRGYLPEALVNFLALLGWSHPEGKEILTKQELIESFSLERLVKNPAIFNPEKLK
type: DOMAIN
name: Glu/Gln-tRNA-synth_Ib_cat-dom
description: Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain

phrase: EVRVRFAPSPTGYLHVGGARTALFNYLYARKTGGKFILRIEDTDLERSEKVFEEQLISALKWLGLEWDEGPDIGGQYGPYRQSERVHLYHEYAQKLIEEGKAYEVYAYPEEIEQLREKLLSEGKAPHYTREMLEPYNTPERKKEYEEKGLKPAVYFSMLRKDYVINDVVKGEVVFKAGSVGDFALLRSNGMPTYNYACVIDDGLMKITHVLRGDDHLSNTVKQVALYEAFGWPTPVFGHVSMILGPDGSKLSKRHGATSVEEFKSRGYLPEALVNFLALLGWSHPEGKEILTKQELIESFSLERLVKNPAIFNPEKLKWMNSEHIR
type: DOMAIN
name: GluRS_core
description: Glutamyl-tRNA synthetase
Protein sequence:
MIIVLSPAKSLDYDTPAHVPSYTKPAFVDDASELIDGLRKLSPQDIATLMDISDPLARLNFQRYADWSPTFSPANAKQAVLAFNGDVYEGFDAKSLSAADLDYAQQHVRVLSGLYGLLRPLDLLQPYRLEMGTRFANARGKDLYAFWGDRITRALNEQLETRSGAARVLVNCASTEYFKSVKPKLLAAPVVTPVFEDWKGGRYKIISFHAKRARGLMARYIVENRIAEPAALKDFAMEDYVFDAAASNDSTYVYRRRIGE

Annotated regions:
Protein sequence:
MENRWQVMIVWQVDRMRIRAWNSLVKHHMYVSKKAQGWIYKHHYESTHPRISSEVHIPLGEDKLVIKTYWGLHTGERDWHLGQGVSIEWRKRRYSTQVDPGLADQLIHLYYFDCFAESAIRQALLGRRVSPRCEYQAGHSKVGSLQYLALTALIKTKRRKPPLPSVAKLTEDRWNEPQKTKGHRGSHTMNGH

Annotated regions:
Protein sequence:
MTAQKGELRQGYTTGSCATAAARAALHLLLDGQMPERVSITLPDGGSAEFSPEAGRRDAAGASCCVRKDAGDDPDVTNGLLVCCRVALLDDEPEGHIEFCRGEGVGMVTLPGLGIDVGGPAINPVPRSMIREALGGLLDRYGLRCGVQVTVSVPGGEEVARKTLNARVGVKGGISIIGTSGRVIPYSEEAYLESIARTIRVARHSGSTHLVACAGARSEKLLRRMYPDLPETAFIHYGNRVGSTLDMIQHDGGFRNLTVGVMLAKATKLAQGELDLSSRTVGLNPQFIEHLVRKTGYAEDVALEAKALELVRSLVDIVPFSSSEPLYRALAESCRRVCRNRFPSGGLEFVLMTMQDGCILCDEHGCRDV

Annotated regions:
Protein sequence:
MACTTILVGKKASYDGSTMVARTEDSQNGDFTPKKMIVVKPEDQPRHYRSVQSSFEMDLPDNPMTYTSVPDALGKDGIWAEAGVNEANVTMSATETITTNSRVLGADPLVASGIGEEDMVTLVLPYIRSAREGVLRLGAILEDYGTYESNGVAFSDEHDIWWLETIGGHHWIARRVPDDAYVTNPNQFGIDHFEFNNPEDYLCSADLKDFIDTYHLDLTYSHEHFNPRYAFGSQRDKDRHYNTPRAWIMQKFLNPEIVQDPRSFALAWCQKPYRKITVEDVKYVLSSHYQDMGYDPYGSEGTPVSKKVFRPIGINRTSQTAILHIRPNKPQEIAAIQWMAYGSMPFNTMVPFFTQVKTIPDYFANTYENVSTDNFYWTNRLIAALADPHYNHHETDLDNYLEETMAKGHAMLHAVEAQLLAGETVDLEEENQKMSDYVQGETQTLLNKILFDASNLMTNRFSLSD

Annotated regions:
Protein sequence:
MYQVPLTLDRDGTLVRLRFTMVALITVCCPLVAFLFCILWSLLFHFKETTSTHCGVPNYLPSVSSAIGGEVPQRYVWRFCIGLHSAPRFLAAFAYWNHYLSCASPCPGYRLLCRLNFSLNVVENLALLVLTYVSSSEDFTIHENAFIVFIAASLSYMLLTCILWRLTKKHTVSQEDRKSYSWKQRLFIINFISFFSALAVYFRHNMYCEAGVYTIFAILEYTVVLTNMAFHMTAWWDFGNKELLITSQPEEKRF

Annotated regions:
Protein sequence:
MMLKQLLNGCEVSERSPEKTSCADRDISGVSYDSRNVKNGDLFVAIRGGKLDGHHFIRDVLGKGAVAVVHELPDAERDIGESGMHPSPCFIQVENSRKALACISNNFYRRPSEHLTLIGITGTNGKTTSSYILKSILEVDGQTTGLISTIHYIIKEKLYSALYTTPESPEFQSLLHTMLASGCTVVVSEVSSHALAQYRVDGAVFHTAVFTNLTRDHLDFHKTMEEYYMAKQRLFSELLARDGTAVINIDDQYGRRLASRLQSDGFRRCITFGIASEADITARDINNTFDGLQLVFSFEGKRYGVSSPLVGVPNVYNILSAAGAALSLGVPWEVILRGIEKAKTVPGRFEKVHAGQSFLCIVDYAHTEDALERLISTAREILTQNKERRTKNKERRIITVFGCGGDRDRGKRQVMGAIATSLSDVVIITSDNPRSEDPAAIIREIEEGTEKKNYLIEPDRKEAIRKAVDMADDGDIVLIAGKGHETYQEIRGARHDFDDREVLKEMIQGRSGIHHAK

Annotated regions:
phrase: ITGTNGKTTSSYILKSILEVDGQTTGLISTIHYIIKEKLYSALYTTPESPEFQSLLHTMLASGCTVVVSEVSSHALAQYRVDGAVFHTAVFTNLTRDHLDFHKTMEEYYMAKQRLFSELLARDGTAVINIDDQYGRRLASRLQSDGFRRCITFGIASEADITARDINNTFDGLQLVFSFEGKRYGVSSPLVGVPNVYNILSAAGA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: IGITGTNGKTTSSYILKSILEVDG
type: CONSERVED_SITE
name: Folylpolyglutamate_synth_CS
description: Folylpolyglutamate synthetase, conserved site

phrase: GRFEKVHAGQSFLCIVDYAHTEDALERLISTAREILTQNKERRTKNKERRIITVFGCGGDRDRGKRQVMGAIATSLSDVVIITSDNPRSEDPAAIIREIEEGTEKKNYLIEPDRKEAIRKAVDMADDGDIVLIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: ISGVSYDSRNVKNGDLFVAIRGGKLDGHHFIRDVLGKGAVAVVHELPDAERDIGESGMHPSPCFIQVENSRKALACISNNF
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain
Protein sequence:
MEEKILPIALRNAIKYNGKANPKAVLGIFLSENPEYRSKAKEVMPIVEKVVEEVNKLSLDEIKKKLEELGEDVKKKEKKEKGLELPNVKDKVVMRFAPNPSGPLHIGHARAAVLNDYFVKKYGGKLILRLEDTDPKRVLPEAYDMIKEDLDWLGVKVDEVVIQSDRIELYYEYGRKLIEMGHAYVCDCNPEEFRELRNKGVPCKCRDRAIEDNLELWEKMLNGELENVAVRLKTDIKHKNPSIRDFPIFRVEKTPHPRTGDKYCVYPLMNFSVPVDDHLLGMTHVLRGKDHIVNTEKQAYIYKYFGWEMPEFIHYGILKIEDIVLSTSSMYKGIKEGLYSGWDDVRLGTLRALRRRGIKPEAIYEIMKRIGIKQADVKFSWENLYAINKELIDKDARRFFFVWNPKKLIIEGAEKKVLKLRMHPDRPEFGERELIFDGEVYVVGDELEENKMYRLMELFNIVVEKVDDIALAKYHSDDFKIARKNKAKIIHWIPVKDSVKVKVLMPDGEIKEGFAEKDFAKVEVDDIIQFERFGFVRIDKKDNDGFVCCYAHR

Annotated regions:
phrase: PNPSGPLHIGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: ARRFFFVWNPKKLIIEGAEKKVLKLRMHPDRPEFGERELIFDGEVYVVGDELEENKMYRLMELFNIVVEKV
type: DOMAIN
name: Glu/Gln-tRNA-synth_Ib_codon-bd
description: Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain

phrase: IIHWIPVKDSVKVKVLMPDGEIKEGFAEKDFAKVEVDDIIQFERFGFVRI
type: DOMAIN
name: tRNA-synt_1c_C2
description: tRNA synthetases class I (E and Q), anti-codon binding domain

phrase: KVVMRFAPNPSGPLHIGHARAAVLNDYFVKKYGGKLILRLEDTDPKRVLPEAYDMIKEDLDWLGVKVDEVVIQSDRIELYYEYGRKLIEMGHAYVCDCNPEEFRELRNKGVPCKCRDRAIEDNLELWEKMLNGELENVAVRLKTDIKHKNPSIRDFPIFRVEKTPHPRTGDKYCVYPLMNFSVPVDDHLLGMTHVLRGKDHIVNTEKQAYIYKYFGWEMPEFIHYGILKIEDIVLSTSSMYKGIKEGLYSGWDDVRLGTLRALRRRGIKPEAIYEIMKRIGIKQADVKFSWENLYAINKELI
type: DOMAIN
name: Glu/Gln-tRNA-synth_Ib_cat-dom
description: Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain
Protein sequence:
MIVEGKVLKFGDKIDTDIIIPARYLKYTDPQYLAQHAMEPLDPEFYKKASAGVILVAGKVFGMGSSREQAAIALKAAGVRAIIAESFARIFYRNAINNGLPAIVLPGVTQLINEGDYVKINVETGEIIVNNQKVYKGRGITGMPLKILESGGLLDYLKKVSVQNQGGN

Annotated regions:
phrase: KFGDKIDTDIIIPARYLKYTDPQYLAQHAMEPLDPEFYKKASAGVILVAGKVFGMGSSREQAAIALKAAGVRAIIAESFARIFYRNAINNGLPAIVLPGVTQLINEGDYVKIN
type: DOMAIN
name: IPMI_Swivel
description: 3-isopropylmalate dehydratase, swivel domain

phrase: PLDPEFYKKASAGVILVAGKVFGMGSSREQAAIALKAAGVRAIIAESFARIFYRNAINNGLPA
type: DOMAIN
name: AconitaseA/IPMdHydase_ssu_swvl
description: Aconitase A/isopropylmalate dehydratase small subunit, swivel domain
Protein sequence:
MADPYEFLMCIHDPEEDTLTRNFPIPATPLDQNTKDISLNLDRKTSLRIFRPPTEEFCVTTNKLLPIIIYFHGGGFVLFNADSTINHDFCQSIATHLPALVVSVDYRLAPENRLPAAYDDAVDALNWVKDQGLGKLNNSEVWLKEYGDFSKCFIMGCSSGGNIAYHASLRAIEMDLEPVIINGLILHSPFFGSLQRTESDLKVINDQDLPLAVRDVMWELALPLGSSRDHVYCNPNIANDGSSSGNMAGLIKRCLVIGFYGDPLIDRQIQLVKMLEEKGVKVETWIEQEGYHGVPCFDPKIRETLLGKIKYFI

Annotated regions:
phrase: IIYFHGGGFVLFNADSTINHDFCQSIATHLPALVVSVDYRLAPENRLPAAYDDAVDALNWVKDQGLGKLNNSEVWLKEYGDFSKCFIMGCSSGGNIAYHASLRAIEMDLEPVIINGLILHSPFFGSLQRTESDLKVINDQDLPLAVRDVMWELALPLGSSRDHVYCNPNIANDGSSSGNMAGLIKRCLVIGFYGDPLIDRQIQLVKMLEEKGVKVETWIEQEGYHG
type: DOMAIN
name: AB_hydrolase_3
description: Alpha/beta hydrolase fold-3

phrase: IIYFHGGGFVLFNADS
type: ACTIVE_SITE
name: Lipase_GDXG_HIS_AS
description: Lipase, GDXG, putative histidine active site
Protein sequence:
MQAMEGEVLLPALYEEEEEEEEEEEEVEEEEEQVQKGGSVGSLSVNKHRGLSLTETELEELRAQVLQLVAELEETRELAGQHEDDSLELQGLLEDERLASAQQAEVFTKQIQQLQGELRSLREEISLLEHEKESELKEIEQELHLAQAEIQSLRQAAEDSATEHESDIASLQEDLCRMQNELEDMERIRGDYEMEIASLRAEMEMKSSEPSGSLGLSDYSGLQEELQELRERYHFLNEEYRALQESNSSLTGQLADLESERTQRATERWLQSQTLSMTSAESQTSEMDFLEPDPEMQLLRQQLRDAEEQMHGMKNKCQELCCELEELQHHRQVSEEEQRRLQRELKCAQNEVLRFQTSHSVTQNEELKSRLCTLQKKYDTSQDEQNELLKMQLQLQTELRQLKVMKSTLVENQSEKELLCRLQKLHLQHQNVTCEKEKLLERQQQLQEELQCHEAELQHLRDTVASFKESNEKDTETHAQLQEMKQLYQASKDELERQKHMYDQLEQDLLLCQLELKELKASHPIPEDKGKCANKCDTLLSRLTELQEKYKASQKEMGQLQMEQCELLEDQRRMQEEQGQLQEELHRLTLPLPKSGLLLKSQELLTKLEDLCELQLLYQGMQEEQKKLIQNQDCVLKEQLEIHEELRRFKESHFQEVLENPDDSKLAKSSKCNRNKQSKLLMEQMQALQVMYDAGQAKQELLQQEQGRLLEERKRLQADLQLCLEEMQLLQVQSPSIKMSLESYGKSYGSMVPSNENCRKTYDTTVDD

Annotated regions: