nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSNTDPQPPQKLPLNWVVWTLAVALMLYYLPAMRDRPEPAIKLPYSEFRMLLREGQISSVTLRGSELDGKFITPRMFPEQRRQYSRFLTQLPDFGNEAILAELEEQNIPLEVKEGHDASSSKVILLSYLPWIMFMIILFWLSRRTFRNFSGRGGAFDFDKRLETQFECQKPDTTFDEVAGQTNAKREVQELVEYLRDPDRFHRVGALAPRGVLLMGPPGTGKTLLARALAGEAGVNFYPMSASEFIEVFVGVGASRVRQLFKIAKENSPSIIFIDELDSVGRTRGAGYGGGHDEREQTLNQILAEMDGFAGHDAVIVLAATNRPDVLDPALMRPGRFDRHVTLDLPDQEGRVAILKVHARHIPLADDVNLNQVAAGTPGFSGADLKNLINEAAIQAARENRDHVHSLDFDIARDKIIMGAERTLIIPPDEKHRLAVHESGHTLVAYYLPNTDPLYKVSIVPHGRSLGGTHQLPLQERHTYPEEYLRDKLAVMLAGRIAERELLGSVSTGADDDIHQATGLARAMVSRWGMSKEVGPVDLRDSEEHPFLGREMAQPHHHSEFSAEIIDKAVRELLVAAETTAADLISTHREKLDRLVALLERSETLHKAQIDECLQTGAS

Annotated regions:
phrase: VIVLAATNRPDVLDPALM
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: DVNLNQVAAGTPGFSGADLKNLINEAAIQAARENRDHVHSLDF
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: WVVWTLAVALMLYYLPAMRDRPEPAIKLPYSEFRMLLREGQISSVTLRGSELDGKFITPRMFPEQRRQYSRFLTQLPDFGNEAILAELEEQNIPLEV
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular

phrase: VLLMGPPGTGKTLLARALAGEAGVNFYPMSASEFIEVFVGVGASRVRQLFKIAKENSPSIIFIDELDSVGRTRGAGYGGGHDEREQTLNQILAEMDGFAGHDAVIVLAATNRPDVLDPALMRPGRFDRHVTL
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: APRGVLLMGPPGTGKTLLARALAGEAGVNFYPMSASEFIEVFVGVGASRVRQLFKIAKENSPSIIFIDELDSVGRTRGAGYGGGHDEREQTLNQILAEMDGFAGHDAVIVLAATNRPDVLDPALMRPGRFDRHVTLDLP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: IPPDEKHRLAVHESGHTLVAYYLPNTDPLYKVSIVPHGRSLGGTHQLPLQERHTYPEEYLRDKLAVMLAGRIAERELLGSVSTGADDDIHQATGLARAMVSRWGMSKEVGPVDLRDSEEHPFLGREMAQPHHHSEFSAEIIDKAVRELLVAAETTAADLISTHREKLDRLVALLERSETLHKAQID
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41
Protein sequence:
MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVRDYYQKWMEEQAQSLIDKTTTAFQQGRIPPNLFSAPPLGGPMIPPPHPSMMGPPPPGMMPVGPPPGMRMPMGGHMPMMPGPPMMRPLPHPMMVPTRPVMPRPDR

Annotated regions:
phrase: FYCDYCDTYLTHDSPSVRKTHCSGRKHKENVR
type: DOMAIN
name: Matrin/U1-C_Znf_C2H2
description: Matrin/U1-C, C2H2-type zinc finger

phrase: MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVRD
type: DOMAIN
name: Matrin/U1-like-C_Znf_C2H2
description: Matrin/U1-C-like, C2H2-type zinc finger

phrase: MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVRDY
type: DOMAIN
name: U1-CZ_Znf_C2H2
description: U1-C, C2H2-type zinc finger
Protein sequence:
MFYPVKVGTRERWSYSRIREVLDMPNLIEIQQNSYQWFLDEGLREMFRDISPIQDFTGNLVLEFIDYSLGEPKYEVEECKERDVTYAAPLRVKVRLINKETGEVKEQEVFMGDFPLMTTKGTFIINGAERVIVSQLVRSPGVYYSESIDPSGKKVFGATVIPNRGAWLEFETDVNDNIFVRVDRTRKLPATVLIRALGYATNGQIAELFDDNEHIRITLERDNTESAEEALVEIYKRLRPGEPPTVDSARSLLEALFFDPKRYDLAKVGRYKLNKKLKLSVPTDVHHLTKEDIVASLRQMLTLMSGEGHKDDIDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMTIQDVDVITPQVLINIRPVVAAIKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLSRERAGFEVRDVHHSHYGRMCPIETPEGPNIGLIGSLSTYGRINPYGFIEAPYRKVNNGQVTDQIDYLTADEEEKFVVAQANAPLTDDGHFIEEKIDGRHGPDFVLVAPERIDYMDVSPKQMVSIATALIPFLEHDDANRALMGANMQRQAVPLLRTDAPYVGTGMEYKAAKDSGVCVLASKDGTVERATAEDIIIRHDDGTLEKHKLLKYLRSNQGTCINQRPIVMKNERVEAGQIIADGPSTDHGELALGRNVLIAFMTWEGYNYEDAILISEKLVKEDYYTSIHIEEYEADARDTKLGPEEITRDIPNVGEDVLKDLDERGIIRIGAEVSTGDILVGKVTPKGETELTAEERLLRAIFG

Annotated regions:
phrase: RSPGVYYSESIDPSGKKVFGATVIPNRGAWLEFETDVNDNIFVRVDRTRKLPATVLIRALGYATNGQIAELFDDNEHIRITLERDNTESAEEALVEIYKRLRPGEPPTVDSARSLLEALFFDPKRYDLAKVGRYKLNKKLKLSVPTDVHHLTKEDIVASLRQMLTLMSGEGHKDDIDHLGNRRL
type: DOMAIN
name: RNA_pol_Rpb2_2
description: RNA polymerase Rpb2, domain 2

phrase: YRKVNNGQVTDQIDYLTADEEEKFVVAQANAPLTDDGHFIEEKIDGRHGPDFVLVAPERIDYMDV
type: DOMAIN
name: DNA-dir_RNA_pol_bsu_external_1
description: DNA-directed RNA polymerase, beta subunit, external 1 domain

phrase: QFMDQTNPLAELTHKRRLSALGPGGLSRERAGFEVRDVHHSHYGRMCPIETPEGPNIGLIGSLSTYGR
type: DOMAIN
name: RNA_pol_Rpb2_3
description: RNA polymerase Rpb2, domain 3

phrase: NLIEIQQNSYQWFLDEGLREMFRDISPIQDFTGNLVLEFIDYSLGEPKYEVEECKERDVTYAAPLRVKVRLINKETGEVKEQEVFMGDFPLMTTKGTFIINGAERVIVSQLVRSPGVYYSESIDPSGKKVFGATVIPNRGAWLEFETDVNDNIFVRVDRTRKLPATVLIRALGYATNGQIAELFDDNEHIRITLERDNTESAEEALVEIYKRLRPGEPPTVDSARSLLEALFFDPKRYDLAKVGRYKLNKKLKLSVPTDVHHLTKEDIVASLRQMLTLMSGEGHKDDIDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMTIQDVDVITPQVLINIRP
type: DOMAIN
name: RNA_pol_bsu_protrusion
description: RNA polymerase, beta subunit, protrusion

phrase: ASKDGTVERATAEDIIIRHDDGTLEKHKLLKYLRSNQGTCINQRPIVMKNERVEAGQIIADGPSTDHGELALGRNVLIAFMTWEGYNYEDAILISEKLVKEDYYTSIHIEEYEADARDTKLGPEEITRDIPNVGEDVLKDLDERGIIRIGAEVSTGDILVGKVTPKGETELTAEERLLRAI
type: DOMAIN
name: DNA-dir_RNAP_su2_dom
description: DNA-directed RNA polymerase, subunit 2, hybrid-binding domain
Protein sequence:
MSHQHPVYRRIVVKVGTNVITGRNGKLDPAILDSLTSQIAALMQDGVEVILVTSGAVSAGRGIVSLSGNLTPVETRQVLAATGQIRLINAYNDRFKKHGITGAQLLVTKGDFRDRQHYLNMRTCFEALLQQKIVPIVNENDAVAITELMFTDNDELSGLIASMLQVDANIILSNVDGLFDTQSEGNPVIEEIDPGTKNFSQYIRPGKSEFGRGGMLTKCNIAHKLSRLGITVHIANGTTPGILQTIAHGGKAGTKFIAQKPKQSRKRWVALSEGLEKGAVIINQGAIDALTSGQRATSLLPVGITGVEGSFQRGDIIRICSTDGKVIGYGMASCTAEKARSAMGQKGLKPVIHYDHLYLVP

Annotated regions:
phrase: RIVVKVGTNVITGRNGKLDPAILDSLTSQIAALMQDGVEVILVTSGAVSAGRGIVSLSGNLTPVETRQVLAATGQIRLINAYNDRFKKHGITGAQLLVTKGDFRDRQHYLNMRTCFEALLQQKIVPIVNENDAVAITELMFTDNDELSGLIASMLQVDANIILSNVDGLFDTQSEGNPVIEEIDPGTKNFSQYIRPGKSEFGRGGMLTKCNIAHKLSRLGITVHIANGTTPGILQTIAHGGKAGTKF
type: DOMAIN
name: G5K_ProB
description: Glutamate-5-kinase domain

phrase: RIVVKVGTNVITGRNGKLDPAILDSLTSQIAALMQDGVEVILVTSGAVSAGRGIVSLSGNLTPVETRQVLAATGQIRLINAYNDRFKKHGITGAQLLVTKGDFRDRQHYLNMRTCFEALLQQKIVPIVNENDAVAITELMFTDNDELSGLIASMLQVDANIILSNVDGLFDTQSEGNPVIEEIDPGTKNFSQYIRPGKSEFGRGGMLTKCNIAHKLSRLGITVHIA
type: DOMAIN
name: Asp/Glu/Uridylate_kinase
description: Aspartate/glutamate/uridylate kinase

phrase: GAVIINQGAIDALTSGQRATSLLPVGITGVEGSFQRGDIIRICSTDGKVIGYGMASCTAEKARSAMGQKGL
type: DOMAIN
name: PUA
description: PUA domain

phrase: SEFGRGGMLTKCNIAHK
type: CONSERVED_SITE
name: Glutamate_5-kinase_CS
description: Glutamate 5-kinase, conserved site

phrase: GAVIINQGAIDALTSGQRATSLLPVGITGVEGSFQRGDIIRICSTDGKVIGYGMASCTAEKARSAMGQKGLKPVIHYD
type: DOMAIN
name: PUA
description: PUA domain
Protein sequence:
MTNISVIAKPYAKAAFEFANEHNLLQQWSKLLQTFSELIKDKSVAAIVSSPTISQIEVVDALKKQLDENFFNFLALIAENKKMLIMPEIADQFESIKKIHNNVRVADVTLAYATDKNILDSLKTSLEKKFGCTIDMHINIDPAIIGGAVVKVGDTVIDSSVSGHLEKLKSILLS

Annotated regions:
phrase: IDMHINIDPAIIGGAVVKV
type: CONSERVED_SITE
name: ATPase_OSCP/d_CS
description: ATPase, OSCP/delta subunit, conserved site
Protein sequence:
MIELAAIHHQPFNSDAYSYNGRTLHIKIRTKKDDAEHVAWFGAILTNTPAHMESERAYVAKIGRNKQPMITGLPKCGLHSGSAIRIYLTALMIETLFTEAMVHVRFRYRQTHVLNFRLFMRQTRLMHRLGQINRLVSNFSGAFRAGGKICSGKPLPWGRKDPEAHDFFGGHLQGIMTSWTIWKTWGEAGIYLTPIFAAPSNHKYDTLDYCSIDPHFGDEELFRTVVSRIHERGMKIMLDAVFNHIGTSQEWQDVVKNGETSRYKDWFIFILSLLKKAAMIHLRLVPRCRSSIAGTRKFRLICLILRCTGSANLISTAGVWMWQMKLIMRFGRNSGKPSPEKPDIFILGEIWHQADPWLRGDEFHIGHELPVHRTDDSLFFRRIDFSSQIASRINSQKMSGMKQVKEVMLNLLDSHERILTRCGGDQRKGARLFWHSCLLRQGRIYYPRKSGFTAAMIHCAGSAWFGKRKNRIKRCLAFMKPLIALRKQENDVLTYGALEWKLVDDQNDFVSFSRTHEGKELIYFFHQGREVRRVRLRDLKIASDKRIYDAWTEEALHDDDVVDIQPGDFSFLGRSKFC

Annotated regions:
phrase: FFGGHLQGIMTSWTIWKTWGEAGIYLTPIFAAPSNHKYDTLDYCSIDPHFGDEELFRTVVSRIHERGMKIMLDAVFNHIGTSQEWQDVVKNGETSRYKDWF
type: DOMAIN
name: Glyco_hydro_13_cat_dom
description: Glycosyl hydrolase, family 13, catalytic domain

phrase: IHHQPFNSDAYSYNGRTLHIKIRTKKDDAEH
type: DOMAIN
name: Glyco_hydro_13_lg-like_dom
description: Glycoside hydrolase, family 13, N-terminal Ig-like domain

phrase: MIELAAIHHQPFNSDAYSYNGRTLHIKIRTKKDDAEHVAWFGAILTNTPAHMESERAYVAKIGRNKQPMITGLPKCGLHSGSAIRIYLTAL
type: DOMAIN
name: Glyco_hydro_13_lg-like_dom
description: Glycoside hydrolase, family 13, N-terminal Ig-like domain

phrase: SNFSGAFRAGGKICSGKPLPWGRKDPEAHDFFGGHLQGIMTSWTIWKTWGEAGIYLTPIFAAPSNHKYDTLDYCSIDPHFGDEELFRTVVSRIHERGMKIMLDAVFNHIGTSQEWQDVVKNGETSRYKDWFIFILSLLKKAAMIHLRLVPRCRSSIAGTRKFRLICLILRCTGSANLISTAGVWMWQMKLIMRFGRNSGKPSPEKPDIFILGEIWHQADPWLRGDEFHIGHELPVHRTDDSLFFRRIDFSSQIASRINSQKMSGMKQVKEVMLNLLDSHERILTRCGGDQRKGARLFWHSCLLRQGRIYYPRKSGFTAAMIHCAGSAWFGKRKNRIKRCLAFMKPLIAL
type: DOMAIN
name: Glyco_hydro_13_cat_dom
description: Glycosyl hydrolase, family 13, catalytic domain
Protein sequence:
MNVPHPHRPSLWLNARLATMDPAHGAPYGALEGHALLLRDGHIEAVLPQAEADAAAFDGEVFDLQGRWVTPGFVDCHTHLVYGGSRAAEWEKRLTGVPYQQIAAEGGGIVSTVRATRWLDEEELALASLPRLKALMAEGVTTVEIKSGYGLTLADELKQLAAARRLQASLPVEVATTLLAAHAVPPEYAGDADGYVDLVVESILPVAARAGLAEAVDAFCESVGFSPAQTRRVFEAARAHGLKVKGHVEQLSNLHGAELVAEFGGLSADHIEYLDDAGVAALKRAGTVAVLLPGAFYFLRETQKPPVDKLRAAGVPMAVSTDLNPGTSPFASIRLAMNQACVLFGLTPEEALAGVTRHAAQALGRGATHGRLAAGCVADLLVWDIAHPAELAYSVGVPLLKQRVFRGAAQHID

Annotated regions:
phrase: WVTPGFVDCHTHLVYGGSRAAEWEKRLTGVPYQQIAAEGGGIVSTVRATRWLDEEELALASLPRLKALMAEGVTTVEIKSGYGLTLADELKQLAAARRLQASLPVEVATTLLAAHAVPPEYAGDADGYVDLVVESILPVAARAGLAEAVDAFCESVGFSPAQTRRVFEAARAHGLKVKGHVEQLSNLHGAELVAEFGGLSADHIEYLDDAGVAALKRAGTVAVLLPGAFYFLRETQKPPVDKLRAAGVPMAVSTDLNPGTSPFASIRLAMNQACVLFGLTPEEALAGVTRHAAQALGRGATHGRLAAGCVADLLVWDIAH
type: DOMAIN
name: Amidohydro-rel
description: Amidohydrolase-related
Protein sequence:
MKLFDHAPLSLAWREFLQSEFKKPYFLEIEKRYLEALKSPKTIFPKSSNLFHALNLTPPSAVKIILLGQDPYHSTYLKKEQELPVAMGLSFSVEKNAPIPPSLKNIFKELHANLGVPVSCCGDLSAWAKRGMLLLNAILSVEKNQAASHKYIGWEAFSDQILMRLFKTTAPLIVVLLGKVAQKKIVLIPKNKHIIITAPHPSPLSRGFLGSGVFTSVQKAYREVYRKDFDFSL

Annotated regions:
phrase: TPPSAVKIILLGQDPYHSTYLKKEQELPVAMGLSFSVEKNAPIPPSLKNIFKELHANLGVPVSCCGDLSAWAKRGMLLLNAILSVEKNQAASHKYIGWEAFSDQILMRLFKTTAPLIVVLLGKVAQKKIVLIPKNKHIIITAPHPSPLSRG
type: DOMAIN
name: Uracil-DNA_glycosylase-like
description: Uracil-DNA glycosylase-like

phrase: NLTPPSAVKIILLGQDPYHSTYLKKEQELPVAMGLSFSVEKNAPIPPSLKNIFKELHANLGVPVSCCGDLSAWAKRGMLLLNAILSVEKNQAASHKYIGWEAFSDQILMRLFKTTAPLIVVLLGKVAQKKIVLIPKNKHIIITAPHPSPLSRGFLGSGVFTSVQKA
type: DOMAIN
name: Uracil-DNA_glycosylase-like
description: Uracil-DNA glycosylase-like

phrase: KIILLGQDP
type: ACTIVE_SITE
name: Ura-DNA_Glyclase_AS
description: Uracil-DNA glycosylase, active site
Protein sequence:
MSRYKIGLGVTGGIAAYKAVELMRVLQKAGCSVSVAMTKHSTEFVTPLTFRALADGPVIVDDYDPSNPDPIAHINFSQSIDLLLIAPATANIIAKMAGGIADDFLSATYLAATAPVIVAPAMNTEMWNHPATQRNIAKLLADGVRFIEPVAGELACKTVGTGKLEDVENIARQTLGFLETKGKLQNDLAGEKLLITVGGTREPIDPVRFISNRSSGKMGFALALAASQRGAKVTAITGTVTAQPPSGIEVINVVTAEEMYAAVMKRFPECSIFIAAAAVADFRPSEMVSNKMKKADRETLQLELVRNPDILSIAAQNRRQGQLIIGFAAETQNVKEYAKEKLEKKGLDMVIANDITQPGAGFDTETNIASIIFPDGRASIDLPLMSKPDLANRILDEIANLRSIGRKHEN

Annotated regions:
phrase: LAGEKLLITVGGTREPIDPVRFISNRSSGKMGFALALAASQRGAKVTAITGTVTAQPPSGIEVINVVTAEEMYAAVMKRFPECSIFIAAAAVADFRPSEMVSNKMKKADRETLQLELVRNPDILSIAAQNRRQGQLIIGFAAETQNVKEYAKEKLEKKGLDMVIANDITQPGAGFDTETNIASI
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal

phrase: KIGLGVTGGIAAYKAVELMRVLQKAGCSVSVAMTKHSTEFVTPLTFRALADGPVIVDDYDPSNPDPIAHINFSQSIDLLLIAPATANIIAKMAGGIADDFLSATYLAATAPVIVAPAMNTEMWNHPATQRNIAKLLADGVRFIEPVAGELACKTVGTGKLEDVENIARQT
type: DOMAIN
name: Flavoprotein
description: Flavoprotein
Protein sequence:
MNEKSIRVLEYGKMIDRLEERCLSAMAKEKARELRPIQSFGEITQLQSETSEAQSILIQRGNIPLGGIHDIKQYLRKTEIGSYLDPKELLLVKDTLRTARNLKSFFKEGDDQTKHPIVSGLIQGLQSFRAIEDRIEICIVSDTEISDHASSTLKNIRRQISSKNDAVRNKLNGIINSSTTQKYLQDAIITMRQDRYVVPVKQEHRGNVPGLIHDQSSSGATLFVEPMAVVQLNNELRELKIKEHIEIERILMEIAEMIAQYATEMRNNQIILTAIDFVFAKGKLSLEMKGVEPLLNVEGNVHIKNGRHPLLNADEVVPTNLWIGETFQTLVITGPNTGGKTVTLKTLGLLSMMAQSGLHVPADYGTRLAIFDQIFADIGDEQSIEQSLSTFSSHMTNIVNIVEEVTSNSLVLFDELGAGTDPTEGAALGMAILNHLREMNVTTVATTHYSELKQYALTNEGVENASVEFDVATLSPTYRLLIGVPGKSNAFEISKKLGLPDGLVQRAKRFLSQDTIHFEDLLQNIEKNRRESEIERQEAKRIRLEAEKFAEGYEDRKQRLEAQRDQILRDAKKEAYRLVKEAKMDSEHIIKGLREMKFELEAKEMNKKMEDAKNQLTGKMNDLSDHHQQILNKKNKKPPKNLKPGDAVRILSLNQVGHVLNEVDPKGEVQVQAGIMKVNMHISNLERVSPEKDIQQSGTGKIMKSKTGDTKSEVDVRGKNLEEAMLEIDKYLDDSYIVGLTQVTIIHGVGTGVLKAGIKQMLKKNKHVRTHREGVYGEGGMGVTIVELK

Annotated regions:
phrase: PGDAVRILSLNQVGHVLNEVDPKGEVQVQAGIMKVNMHISN
type: DOMAIN
name: MSSS
description: MutS2 and Smr-associated SH3 domain

phrase: LVITGPNTGGKTVTLKTLGLLSMMAQSGLHVPADYGTRLAIFDQIFADIGDEQSIEQSLSTFSSHMTNIVNIVEEVTSNSLVLFDELGAGTDPTEGAALGMAILNHLREMNVTTVATTHYSELKQYALTNEGVENASVEFDVATLSPTYRLLIGVPGKSNAFEISKKLGLPDGLVQRAKRFL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: LEYGKMIDRLEERCLSAMAKEKARELRPIQSFGEITQLQSETSEAQSILIQRGNIPLGGIHDIKQYLRKTEIGSYLDPKELLLVKDTLRTARNLKSFFKEGDDQTKHPIVSGLIQGLQSFRAIEDRIEICIVSDTEISDHASSTLKNIRRQISSKNDAVRNKLNGIINSSTTQKYLQDAIITMRQDRYVVPVKQEHRGNVPGLIHDQSSSGATLFVEPMAVVQLNNELRELKIKEHIEIERILMEIAEMIAQYATEMRNNQIILTAIDFVFAKGKLSLEMKGVEPLLNVEGNVHIKNGRHPLLNA
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: SLVLFDELGAGTDPTE
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: VDVRGKNLEEAMLEIDKYLDDSYIVGLTQVTIIHGVGTGVLKAGIKQMLKKNKHVRTHREGVYGEGGMGVTIVEL
type: DOMAIN
name: Smr_dom
description: Smr domain

phrase: FQTLVITGPNTGGKTVTLKTLGLLSMMAQSGLHVPADYGTRLAIFDQIFADIGDEQSIEQSLSTFSSHMTNIVNIVEEVTSNSLVLFDELGAGTDPTEGAALGMAILNHLREMNVTTVATTHYSELKQYALTNEGVENASVEFDVATLSPTYRLLIGVPGKSNAFEISKKLGLPDGLVQRAKRFL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: VDVRGKNLEEAMLEIDKYLDDSYIVGLTQVTIIHGVGTGVLKAGIKQMLKKNKHVRTHREGVYGEGGMGVTIVEL
type: DOMAIN
name: Smr_dom
description: Smr domain

phrase: KSEVDVRGKNLEEAMLEIDKYLDDSYIVGLTQVTIIHGVGTGVLKAGIKQMLKKNKHVRTHREGVYGEGGMGVTIVEL
type: DOMAIN
name: Smr_dom
description: Smr domain
Protein sequence:
MSDDKTNIDQDNHPENSERRKFFGKSAAIGLGVAAAPMTAAMFASMAKAQASEISNSAVVHPGDLDEYYGFWSGGHSGEVRILGLPSMRELMRIPVFNVDSATGWGLTDESKRIKGDSAHILAGDSHHPHMSMTDGRYNGKYVFINDKANSRVARIRCDVMKCDKMLTIPNVQAIHGLRVQKVPQTKYVICNGEFEIPMNNDGKTTLDDISTYRSLFNVIDAEKMEVAFQVMVDGNLDNTDADYDGKYFASTCYNSEMGMNLGEMITAERDHVVVFSLERCEAALKAGNFKTYNGNDVPVLDGRKGSDLTRYIPVPKSPHGLNTSPSGEYFVANGKLSPTVSVISIAKLDSLFSNSIKPRDTIVAEPELGLGPLHTAFDNKGFAYTTLFLDSQIAKWSVEDAIKAYNGDKVNYIRQKLDVHYQPGHNHTSQGETRDADGKWLISLCKFSKDRFLPVGPLRPENDQLIDISGDEMKLIHDGPTFAEPHDCMIVHRSKVKPNKLWTRDDSIFAETLAIAKKDGVDVMTQNKVIRDGNKVRVYMTSIAPTFGMNEFRVKLGDEVTVIVTNLDMVEDVTHGFCMTNHGVQMEIGPQATASITFTANKPGVQWYYCNWFCHALHMEMRGRMLVEA

Annotated regions:
phrase: VTHGFCMTNHGVQMEIGPQATASITFTANKPGVQWYYCNWFCHALHME
type: BINDING_SITE
name: Copper_CuA
description: Copper centre Cu(A)

phrase: KVRVYMTSIAPTFGMNEFRVKLGDEVTVIVTNLDMVEDVTHGFCMTNHGVQMEIGPQATASITFTANKPGVQWYYCNWFCHALHMEMRGRMLV
type: DOMAIN
name: N2OR_C
description: Nitrous-oxide reductase, C-terminal

phrase: RDGNKVRVYMTSIAPTFGMNEFRVKLGDEVTVIVTNLDMVEDVTHGFCMTNHGVQMEIGPQATASITFTANKPGVQWYYCNWFCHALHMEMRGRMLVE
type: DOMAIN
name: CcO_II-like_C
description: Cytochrome c oxidase subunit II-like C-terminal

phrase: IPNVQAIHGLRVQKVPQTKYVICNGEFEIPMNNDGKTTLDDISTYRSLFNVIDAEKMEVAFQVMVDGNLD
type: REPEAT
name: NOS_propeller_2
description: Nitrous oxide reductase, propeller repeat 2

phrase: KLDVHYQPGHNHTSQGETRDADGKWLISLCKFSKDRFLPVGPLRPENDQLIDISGDEMKLIHDGPTFAEP
type: REPEAT
name: Nos_propeller
description: Nitrous oxide reductase, propeller repeat 1

phrase: MSDDKTNIDQDNHPENSERRKFFGKSAAIGLGVAAAPMTAAMFASMAKAQ
type: CONSERVED_SITE
name: TAT_signal
description: Twin-arginine translocation pathway, signal sequence
Protein sequence:
MSKRIVLASGNAGKLREFNAMMADLNIEFVRQSEFGVSDAVEDGLTFVENALIKARHAAKLTGMPAMADDSGIVVDALGGAPGLYSARFAGDHGDDAANNAKLLADLHDVPDAQRTARFYCCIVYLRHAEDQLPIIAEARWEGVILHQASGANGFGYDPLFYVPTHGCSSAELPSAEKNRISHRGQALRKLHALLGG

Annotated regions:
Protein sequence:
MKHLTEMVRQHKAGKTNGIYAVCSAHPLVLEAAIRYASANQTPLLIEATSNQVDQFGGYTGMTPADFRGFVCQLADSLNFPQDALILGGDHLGPNRWQNLPAAQAMANADDLIKSYVAAGFKKIHLDCSMSCQDDPIPLTDDIVAERAARLAKVAEETCREHFGEADLEYVIGTEVPVPGGAHETLSELAVTTPDAARATLEAHRHAFEKQGLNAIWPRIIALVVQPGVEFDHTNVIDYQPAKAAALSQMVENYETLIFEAHSTDYQTPQSLRQLVIDHFAILKVGPALTFALREALFSLAAIEEELVPAKACSGLRQVLENVMLDRPEYWQSHYHGDGNARRLARGYSYSDRVRYYWPDSQIDDAFAHLVRNLADSPIPLPLISQYLPLQYVKVRSGELQPTPRELIINHIQDILAQYHTACEGQ

Annotated regions:
Protein sequence:
MYSCHDSLTSNRAVVMSNNEDSVQYAKQLDAEFPSYKEHFAIPTLGSLGSNITGISSSDDKSSDPSYYFCGNSLGLMPLSTEKAVLQEIDAWKQRGVVSHFDHPHAEPWVSIDDPVTPLLAPLVGSEQYPSEVAIMNTLTGNLHTMLSTFYRPEGKRYKILFEQKAFPSDTYAFQGQVQLHGYSIEDGLIPLAPREGEYTLRTEDILAEIERSGDSIAVIIFSGIQFYTGQLFDMKTITQAGKSKGCIVGWDLAHAIGNVPMKLHDWGVDFAVFCTYKYLNSGPGSIGGIFVHSKHSDDKRPRLAGWWGNNSSTRFQMLDDFDPISGAYGFRMSNPSVLNTVCLGESLKLFKKAGGIEYLRKRSLSMTNYLYDLLIKSKFYVDPEVVASGKVPSPSFTIITPKNPEERGAQLSLLFLPINSGNMQKVFSYFESRGVIGDERKPDVLRLAPNHFYNTHQEVLAVTEMLDAALDSI

Annotated regions:
Protein sequence:
MLIFPLINDTSRKIIHIDMDAFFAAVEERDNPALKGKPVVIGKDPRETGGRGVVSTCNYEARKYGIHSAMSSKEAYERCPKAIFISGNYEKYRTVGDQIRRIFKRYTDVVEPMSIDEAYLDVTNNKLGIKSAVKIAKLIQHDIWKEVGLTCSAGVSYNKFLAKLASDFEKPHGLTLVLKEDALCFLAKLPIEKFHGVGKKSVEKLHDMGIYTGQDLLAVPEMTLIDHFGRFGFDLYRKARGISNSPVKSDRIRKSIGSERTYAKLLYQETDIKAEISKNAKRVAALLQDHKKLGKTIVLKVRYADFTTLTKRVTLPELTRNAAQIEQVAGDIFDSLSENPAGIRLLGVTMTNLEDKVADISLDL

Annotated regions:
phrase: RKSIGSERTYAKLLYQETDIKAEISKNAKRVAALLQDHKKLGKTIVLKVRYADFTTLTKRVTLPELTRNAAQIEQVAGDIFDSLSENPAGIRLLGVTMTNLED
type: DOMAIN
name: DNA_pol_Y-fam_little_finger
description: DNA polymerase, Y-family, little finger domain

phrase: EDALCFLAKLPIEKFHGVGKKSVEKLHDMG
type: CONSERVED_SITE
name: PolY_HhH_motif
description: DNA polymerase type-Y, HhH motif

phrase: IDMDAFFAAVEERDNPALKGKPVVIGKDPRETGGRGVVSTCNYEARKYGIHSAMSSKEAYERCPKAIFISGNYEKYRTVGDQIRRIFKRYTDVVEPMSIDEAYLDVTNNKLGIKSAVKIAKLIQHDIWKEVGLTCSAGVSYNKFLAKLAS
type: DOMAIN
name: UmuC
description: UmuC domain

phrase: IIHIDMDAFFAAVEERDNPALKGKPVVIGKDPRETGGRGVVSTCNYEARKYGIHSAMSSKEAYERCPKAIFISGNYEKYRTVGDQIRRIFKRYTDVVEPMSIDEAYLDVTNNKLGIKSAVKIAKLIQHDIWKEVGLTCSAGVSYNKFLAKLASDFEKPHGLTLVLKEDALCFLAKLPIEKFHGV
type: DOMAIN
name: UmuC
description: UmuC domain
Protein sequence:
MAIQKKHGKGRLDKWYRLAKEKGYRARAAFKLVQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMPAQSLIVGVDLAPIKPIPRVITFQQDITTEKCRATIRSHLKHWKADTVLHDGAPNVGTAWVQDAFSQAELVLESLKLATEFLVEGGTFVTKVFRSKDYNPLLWVFKQLFMSVEATKPPSSRNVSAEIFVVCRGYKAPKRIDPKFLDSKHVFAELADPTPNNEAKVFNPEKKKRKREGYEEGDWTQFKEIPVTEFINTTDPIAILGSCNKLSFQQQPGGDLALATLDRLPETTDEIRNCCEDLKVLGKKEFRNLLRWRLKVREKFGLVVKKGQAKDDEAEEVAEIAPMDDELAIQEELLRLKEKESARSKKERRKENERKRKEIVRMQMHMTTPMDIGMEQLGPGGEDATFSLKRAEKAGAAAAMASGKELAVIESESEESESETEYDDSDDEGDRLERELDSLYEQYQERKEDKDSKLRAKKARKDYEADEWEGFSDSDKEGSDDEEDEAKPNVPVVPTNGALSNNAALFFDQDIFQGLDDVEDEEDEAEGTNNMTVANEREEQQEEEEEEQPKSEAAPEKKKKVKETANSKPSEDSSDDEYEDTDEPRKKNGQLDIDIITAEAMALAQQMATGEKKSQDVFDDGFNRYAFRDVDGLPEWFLDDENKHSKPNRPITKAAAAAIQEKWRAINARPIKKVMEAKGRKKFKAAQRIEKLRKKSALLADDETMSERDKAQAIARMMSRAAKKKPKQNVKLVVAKGGNRGISGRPKGVKGKYKIVDARMKKDVRAQKRLAKKKQK

Annotated regions:
phrase: PEKKKRKREGYEEGDWTQFKEIPVTEFINTTDPIAILGSCNKLSFQQQPGGDLALATLDRLPETTDEIRNCCEDLKVLGKKEFRNLLRWRLKVREKFGLVVKKGQAKDDEAEEVAEIAPMDDELAIQEELLRLKEKESARSKKERRKENERKRKEIV
type: DOMAIN
name: rRNA_MeTfrase_Spb1_DUF3381
description: Ribosomal RNA methyltransferase Spb1, domain of unknown function DUF3381

phrase: YRARAAFKLVQLNKKYGFLEKSKVLLDLCAAPGSWCQVAAECMPAQSLIVGVDLAPIKPIPRVITFQQDITTEKCRATIRSHLKHWKADTVLHDGAPNVGTAWVQDAFSQAELVLESLKLATEFLVEGGTFVTKVFRSKDYNPLLWVFKQLFMSVEATKPPSSRNVSAEIFVVCRG
type: DOMAIN
name: RNA_MeTrfase_FtsJ_dom
description: Ribosomal RNA methyltransferase, FtsJ domain

phrase: KVKETANSKPSEDSSDDEYEDTDEPRKKNGQLDIDIITAEAMALAQQMATGEKKSQDVFDDGFNRYAFRDVDGLPEWFLDDENKHSKPNRPITKAAAAAIQEKWRAINARPIKKVMEAKGRKKFKAAQRIEKLRKKSALLADDETMSERDKAQAIARMMSRAAKKKPKQNVKLVVAKGGNRGISGRPKGVKGKYKIVDARMKKDVRAQKRLA
type: DOMAIN
name: rRNA_MeTfrase_SPB1-like_C
description: Ribosomal RNA methyltransferase, SPB1-like, C-terminal
Protein sequence:
MANQPIILNVYDMYWINEYTSSLGIGVFHSGIQVYGREFAYGGHPYPFSGVFEISPGDSTELGDTFKFKEAIALGSTDFTENDIEKIIEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWVNRLAYFSTCVPFLQSCLPKEWLTPAALQSSISQELQDELEEAEDAAASASTSTTAMPRPGRHTKL

Annotated regions:
phrase: PIILNVYDMYWINEYTSSLGIGVFHSGIQVYGREFAYGGHPYPFSGVFEISPGDSTELGDTFKFKEAIALGSTDFTENDIEKIIEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWVNRLAYFSTCVPFLQSCLPKE
type: DOMAIN
name: PPPDE_dom
description: PPPDE peptidase domain

phrase: QPIILNVYDMYWINEYTSSLGIGVFHSGIQVYGREFAYGGHPYPFSGVFEISPGDSTELGDTFKFKEAIALGSTDFTENDIEKIIEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWVNRLAYFSTCVPFLQSCLPKEW
type: DOMAIN
name: PPPDE_dom
description: PPPDE peptidase domain

phrase: ANQPIILNVYDMYWINEYTSSLGIGVFHSGIQVYGREFAYGGHPYPFSGVFEISPGDSTELGDTFKFKEAIALGSTDFTENDIEKIIEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWVNRLAYFSTCVPFLQSCLPKEWLTPAALQSSISQELQDELEEAED
type: DOMAIN
name: PPPDE_dom
description: PPPDE peptidase domain

phrase: QPIILNVYDMYWINEYTSSLGIGVFHSGIQVYGREFAYGGHPYPFSGVFEISPGDSTELGDTFKFKEAIALGSTDFTENDIEKIIEELGKEYKGNAYHLMHKNCNHFSSALSEILCGKEIPRWVNRLAYFSTCVPFLQSCLPKE
type: DOMAIN
name: PPPDE_dom
description: PPPDE peptidase domain
Protein sequence:
MDRYNPPRRNGNSKKNEVVITGGRTQRIDFEKDVNKTTILPAGASVGRRGRGAGWYCEACNETYKDSLSWLDHLNSTQHLRKTRTVIIEKRATLEEVKERMEYWRRQLLEPEKGSEEYSLKERVERYHQELEAKKLRRKQKKVNKEKNSPRLVGENTELAAIMGISSFGSTNL

Annotated regions:
phrase: WYCEACNETYKDSLSWLDHLNSTQ
type: DOMAIN
name: Znf_C2H2_jaz
description: Zinc finger, double-stranded RNA binding

phrase: GAGWYCEACNETYKDSLSWLDHLNSTQHLRKTRT
type: DOMAIN
name: Matrin/U1-like-C_Znf_C2H2
description: Matrin/U1-C-like, C2H2-type zinc finger
Protein sequence:
MDRKEQKAIIEGLLFVAGDEGIYPEQIAKVLEVEVEEVLNSIEEMQKECEGSNRGLQIVQYAKVYRFATKKEHASYYQKLIDTPTAASLSQAALETLAIVAYRQPITRTEMEEIRGVKTDKALQTLVSHLLIKETGRAEGPGRPILYGTTKEFLDTFGLKTLDDLPPLSEENEQMNEADLFFGSLQELSK

Annotated regions:
Protein sequence:
MVTVVENIDPKIKPVPAVIKELEEKYAGKFVVQHTVDEIPTVWVARADLLDVLLFLRKLPKPYVMLFDLSAIDERLRQHRQGLPESDFTVFYHLMSLERNSDVRIKVALSEEDLNVPSATQIWPNANWYEREVWDMFGIVFTGHPHLTRILLPKYWEGHPLRKEYHARATEFTPYFLNTAKQQYEQENLRFVPEEWGMKRSGRDEDFMFLNIGPNHPSAHGAFRLVLQLDGEEVVDCIPDIGYHHRGAEKMAERQTWHSFIPYTDRIDYLGGVMNELPYIMSVEKLAGITIPPRAETIRVMMSEFFRITNNLLFVGTFIQDAGGMTPVFYMFTDRQKAYDVIEAVTGYRMHPAWFRIGGTAHDLPRGWQRLVREFLDWMPKRLDEYVKAALQNSVLKGRTQGVAQYNTKQALAWGVTGAGLRATGLDFDLRKARPYMGYENYDFEVPVGYNGDAYDRCMVKVEEMRQSLRIIRQCMDNMPQGPYKADHPLAVPPPKDRTLNDIETLINHFISVSWGPVMPAGECTTIVEATKGLNSYYITSDKATMSYRTRIRTPTFAHLQQMPSVINGSLVSDAIMYLASIDVVMADCDR

Annotated regions:
phrase: VWVARADLLDVLLFLRKLPKPYVMLFDLSAIDERLRQHRQGLPESDFTVFYHLMSLERNSDVRIKVALSEEDLNVPSATQIWPNANWYEREVWDMFGIVFTGHPHLTRILLPKYWEGHPLRKEYHARA
type: DOMAIN
name: NADH_UbQ_OxRdtase_30kDa_su
description: NADH:ubiquinone oxidoreductase, 30kDa subunit

phrase: DAGGMTPVFYMFTDRQKAYDVIEAVTGYRMHPAWFRIGGTAHDLPRGWQRLVREFLDWMPKRLDEYVKAALQNSVLKGRTQGVAQYNTKQALAWGVTGAGLRATGLDFDLRKARPYMGYENYDFEVPVGYNGDAYDRCMVKVEEMRQSLRIIRQCMDNMPQGPYKADHPLAVPPPKDRTLNDIETLINHFISVSWGPVMPAGECTTIVEATKGLNSYYITSDKATMSYRTRIRTPTFAHLQQMPSVINGSLVSDAIMYLASIDVVMADCD
type: DOMAIN
name: NADH_Q_OxRdtase_suD
description: NADH-quinone oxidoreductase, subunit D

phrase: HHRGAEKMAER
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_49kDa_CS
description: NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site
Protein sequence:
MVRIMLMHAVRAWRSADDFPCTEHMAYKIAQVAADPVDVDPEVADMVCNRIIDNAAVSAASMVRRPVTVARHQALAHPVRHGAKVFGVEGSYSADWAAWANGVAARELDFHDTFLAADYSHPADNIPPLVAVAQQLGVCGAELIRGLVTAYEIHIDLTRGICLHEHKIDHVAHLGPAVAAGIGTMLRLDQETIYHAIGQALHLTTSTRQSRKGAISSWKAFAPAHAGKVGIEAVDRAMRGEGSPAPIWEGEDGVIAWLLAGPEHTYRVPLPAPGEPKRAILDSYTKQHSAEYQSQAPIDLACRLRERIGDLDQIASIVLHTSHHTHVVIGTGSGDPQKFDPDASRETLDHSLPYIFAVALQDGCWHHERSYAPERARRSDTVALWHKISTVEDPEWTRRYHCADPAKKAFGARAEVTLHSGEVIVDELAVADAHPLGTRPFERKQYVEKFTELADGVVEPVEQQRFLAVVESLADLESGAVGGLNVLVDPRVLDKAPVIPPGIFR

Annotated regions:
phrase: HSAEYQSQAPIDLACRLRERIGDLDQIASIVLHTSHHTHVVIGTGSGDPQKFDPDASRETLDHSLPYIFAVALQDGCWHHERSYAPERARRSDTVALWHKISTVEDPEWTRRYHCADPAKKAFGARAEVTLHSGEVIVDELAVADAHPLGTRPFERKQYVEKFTELADGVVEPVEQQRFLAVVESL
type: DOMAIN
name: MmgE_PrpD_C
description: MmgE/PrpD, C-terminal

phrase: HMAYKIAQVAADPVDVDPEVADMVCNRIIDNAAVSAASMVRRPVTVARHQALAHPVRHGAKVFGVEGSYSADWAAWANGVAARELDFHDTFLAADYSHPADNIPPLVAVAQQLGVCGAELIRGLVTAYEIHIDLTRGICLHEHKIDHVAHLGPAVAAGIGTMLRLDQETIYHAIGQALHLTTSTRQSRKGAISSWKAFAPAHAGKVGIEAVDRAMRGEGSPAPIWEGEDGVIAWLLAGPE
type: DOMAIN
name: MmgE_PrpD_N
description: MmgE/PrpD, N-terminal
Protein sequence:
MPPFDGRRVLLGVTGGIASYKSVSLARLLAQAGAVVDVVMTRSAKEFVGAITFEALTGRPVHTDLVAEGHALDHVALARQSELVVVAPATADFISRAASGRADDLLAACLLATDAAVLIVPAMNDRMWSHPQTVANVAHLRSLGYAVLDPGTGPLASPDEGAGQGRMREPDEILRAISGLLEPAGTLTGKKVVVTAGPTREPIDPVRYLSNRSSGKMGVAIAAAAKRRGAYVILIAGPITVAVPAGITVVHVERNAEMAAAVRVALGGADLLVMAAAPADFRPSTVADAKIKKGTVGASLGIEQTDDILMVTRDARPAGCFVVGFALETDDVLANAAAKLEKKGLDLIIANDPSEVGAGFGGDTNRVTILAKGAKPEPLPLMSKDAVADAILDRVESHWIDGARGR

Annotated regions:
phrase: RVLLGVTGGIASYKSVSLARLLAQAGAVVDVVMTRSAKEFVGAITFEALTGRPVHTDLVAEGHALDHVALARQSELVVVAPATADFISRAASGRADDLLAACLLATDAAVLIVPAMNDRMWSHPQTVANVAHLRSLGYAVLDPGTGPLASPDEGAGQGRMREPDEILRA
type: DOMAIN
name: Flavoprotein
description: Flavoprotein

phrase: LTGKKVVVTAGPTREPIDPVRYLSNRSSGKMGVAIAAAAKRRGAYVILIAGPITVAVPAGITVVHVERNAEMAAAVRVALGGADLLVMAAAPADFRPSTVADAKIKKGTVGASLGIEQTDDILMVTRDARPAGCFVVGFALETDDVLANAAAKLEKKGLDLIIANDPSEVGAGFGGDTNRVTI
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal