nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MNKKILETLEFDKVKALFEPHLLTEQGLEQLRQLAPTAKADKIKQAFAEMKEMQALFVEQPHFTILSTKEIAGVCKRLEMGADLNIEEFLLLKRVLLASRELQSFYANLENVSLEELAFWFEKLHDFPQLQGNLQAFNDAGFIENFASEELARIRRKIHDSESQVRDVLQDLLKQKAQMLTEGIVASRNGRQVLPVKNTYRNKIAGVVHDISASGNTVYIEPREVVKLSEEIASLRADERYEMLRILQEISERVRPHAAEIANDAWIIGHLDLIRAKVRFIQERQAVVPQLSENQEIQLLHVCHPLVKNAVANDVYFGQDLTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPILADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTDPQEGAALAMAILEDLRLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRFMQGVPGRSNAFEIAKRLGLSEVIVGDASQQIDQDNDVNRIIEQLEEQTLESRKRLDNIREVEQENLKMNRALKKLYNELNREKETELNKAREQAAEIVDMALSESDQILKNLHSKSQLKPHEIIEAKAKLKKLAPEKVDLSKNKVLQKAKKKRAPKVGDDIVVLSYGQRGTLTSQLKDGRWEAQVGLIKMTLEEKEFDLVQAQQEKAVKKKQVNVVKRTSGRGPQARLDLRGKRYEEAMNELDTFIDQALLNNMAQVDIIHGIGTGVIREGVTKYLQRNKHVKSFGYAPQNAGGSGATIVTFKG

Annotated regions:
phrase: QARLDLRGKRYEEAMNELDTFIDQALLNNMAQVDIIHGIGTGVIREGVTKYLQRNKHVKSFGYAPQNAGGSGATIVTF
type: DOMAIN
name: Smr_dom
description: Smr domain

phrase: LDLRGKRYEEAMNELDTFIDQALLNNMAQVDIIHGIGTGVIREGVTKYLQRNKHVKSFGYAPQNAGGSGATIVTF
type: DOMAIN
name: Smr_dom
description: Smr domain

phrase: LTAIVITGPNTGGKTIMLKTLGLTQVMAQSGLPILADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTDPQEGAALAMAILEDLRLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRFMQGVPGRSNAFEIAKRLGLSEVIVGDASQQI
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: IVITGPNTGGKTIMLKTLGLTQVMAQSGLPILADKGSRVGIFEEIFADIGDEQSIEQSLSTFSSHMTNIVDILGKVNQHSLLLLDELGAGTDPQEGAALAMAILEDLRLRQIKTMATTHYPELKAYGIETAFVQNASMEFDTATLRPTYRFMQGVPGRSNAFEIAKRLGLSEVIVGDASQQI
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: VGDDIVVLSYGQRGTLTSQLKDGRWEAQVGLIKMTLEEK
type: DOMAIN
name: MSSS
description: MutS2 and Smr-associated SH3 domain

phrase: LDLRGKRYEEAMNELDTFIDQALLNNMAQVDIIHGIGTGVIREGVTKYLQRNKHVKSFGYAPQNAGGSGATIVTF
type: DOMAIN
name: Smr_dom
description: Smr domain

phrase: LEFDKVKALFEPHLLTEQGLEQLRQLAPTAKADKIKQAFAEMKEMQALFVEQPHFTILSTKEIAGVCKRLEMGADLNIEEFLLLKRVLLASRELQSFYANLENVSLEELAFWFEKLHDFPQLQGNLQAFNDAGFIENFASEELARIRRKIHDSESQVRDVLQDLLKQKAQMLTEGIVASRNGRQVLPVKNTYRNKIAGVVHDISASGNTVYIEPREVVKLSEEIASLRADERYEMLRILQEISERVRPHAAEIANDAWIIGHLDLIRAKVRFIQERQAVVPQLSENQEIQLLHVCHPLVKN
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: SLLLLDELGAGTDPQE
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal
Protein sequence:
MESENEKSLQDAASQDANDPLGQFRDRFHIPTGQDGEPLIYFSGHSLGLMPRKCFDDVTAELEAWRDLAVAGHLEGRHPWFPYHESFRASGARLVGAEPIEIVFMNTLTANLHFLLVSFYRPTSGRNRILCDSPTFPSDLYALQAQARWHRLDPDDVVQVMKLREGESSLRDDDVLQAIDDQRDKLALVMFSGVNYYTGQAFDIEAIAARCQQYGITFGLDLAHAAGNLDLKLHDHGVDFATWCTYKYGNAGPGAVAGAFVHERHADDQELVRLAGWWGNDPATRFRMDENTKFIAHPGAEGWQVSNPPIFSMAPLRTSLEIFDEAGITALRERSIRLTGYLEQRIDSIGTDHYQIITPRNPDRRGAQISIRVIGDASALQQSLEEAGIITDFRPPDVVRVAPTPLYNTFEEIHRFTEVLESVAQIGTKRGRD

Annotated regions:
Protein sequence:
MSAKATSKKTKYIFVTGGVTSSLGKGIIASSLAKLLQARGLSVTIQKFDPYINIDPGTLNPYEHGECYVTNDGAETDLDLGHYERFLNVPTSQANNITTGRIYHNVITKERKGDYLGKTVQVVPHITDEIKRNVLLLGETGKFDIVITEIGGCVGDIESLPFIEAARQLKWDLGEKYTLFIHLTLVPYLSSAGELKTKPTQHSVKALSESGIQPDILVCRTEHPLPQDMKRKIGLFCNVSEQDVIEAMDAETIYDVPLLMKEEKLDSRVLYKLDIYNDQDSNLTQWNNFLGKLKNPKFEINIGLIGKYVELKDSYKSIAEAFIHAGAANEIKVNVNWISSETMDPENMDETLKHLDGILVAPGFGERGIQGKIEAVKYARENKIPFMGICLGMQCAVIEFARNVLGLENAHSFEMNPDTDNAVIDIMESQKDVSEKGGTMRLGSYPCKIEKGTLAYKIYGKANIQERHRHRYEFNNKYMDAFKKAGMQMSGINPDTNLVEIVELPNHPFFIGVQFHPEYKSTVEVPSPIFVHFIKAAYQHALPLIKNSKN

Annotated regions:
phrase: KYIFVTGGVTSSLGKGIIASSLAKLLQARGLSVTIQKFDPYINIDPGTLNPYEHGECYVTNDGAETDLDLGHYERFLNVPTSQANNITTGRIYHNVITKERKGDYLGKTVQVVPHITDEIKRNVLLLGETGKFDIVITEIGGCVGDIESLPFIEAARQLKWDLGEKYTLFIHLTLVPYLSSAGELKTKPTQHSVKALSESGIQPDILVCRTEHPLPQDMKRKIGLFCNVSEQDVIEAMDAETIYDVPLLMKEEKLDSRV
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: INIGLIGKYVELKDSYKSIAEAFIHAGAANEIKVNVNWISSETMDPENMDETLKHLDGILVAPGFGERGIQGKIEAVKYARENKIPFMGICLGMQCAVIEFARNVLGLENAHSFEMNPDTDNAVIDIMESQKDVSEKGGTMRLGSYPCKIEKGTLAYKIYGKANIQERHRHRYEFNNKYMDAFKKAGMQMSGINPDTNLVEIVELPNHPFFIGVQFHPEYKSTVEVPSPIFVHF
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain

phrase: KYIFVTGGVTSSLGKGIIASSLAKLLQARGLSVTIQKFDPYINIDPGTLNPYEHGECYVTNDGAETDLDLGHYERFLNVPTSQANNITTGRIYHNVITKERKGDYLGKTVQVVPHITDEIKRNVLLLGETGKFDIVITEIGGCVGDIESLPFIEAARQLKWDLGEKYTLFIHLTLVPYLSSAGELKTKPTQHSVKALSESGIQPDILVCRTEHPLPQDMKRKIGLFCNVSEQDVIEAMDAETIYDVPLLMKEEKLDSRVLYKL
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: LKDSYKSIAEAFIHAGAANEIKVNVNWISSETMDPENMDETLKHLDGILVAPGFGERGIQGKIEAVKYARENKIPFMGICLGMQCAVIEFARNVLGLENAHSFEMNPDTDNAVIDIMESQKDVSEKGGTMRLGSYPCKIEKGTLAYKIYGKANIQERHRHRYEFNNKYMDAFKKAGMQMSGINPDTNLVEIVELPNHPFFIGVQFHPEYKSTVEVPSPIFVHFI
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase
Protein sequence:
EGDVAKGEAAFKRCSACHAIGEGAKNKVGPQLNGIIGRTAGGDPDYNYSNAMKKAGGEGLVWTPQELRDFLSAPKKKIPGNKMALAGISKPEELDNLIAYLIFSASSKPAX

Annotated regions:
phrase: GDVAKGEAAFKRCSACHAIGEGAKNKVGPQLNGIIGRTAGGDPDYNYSNAMKKAGGEGLVWTPQELRDFLSAPKKKIPGNKMALAGISKPEELDNLIAYLIFS
type: DOMAIN
name: Cyt_c-like_dom
description: Cytochrome c-like domain

phrase: VAKGEAAFKRCSACHAIGEGAKNKVGPQLNGIIGRTAGGDPDYNYSNAMKKAGGEGLVWTPQELRDFLSAPKKKIPGNKMALAGISKPEELDNLIAY
type: DOMAIN
name: Cyt_c-like_dom
description: Cytochrome c-like domain
Protein sequence:
MPNTLEQFKSITTIVADTGDIEAIKRYQPEDATTNPSLILKAAQIPDYAHLIENAIEWAKSQSDSIEQQVEDAGDKLAVNIGVEILKIVPGRISTEVDARLSFDKAGSITKAHKLIKLYKEAGIDKSRILIKLASTWEGICAAKELEQEGINCNLTLLFSFAQARACAEAGVYLISPFVGRILDWYKKDTGLEYSSVEDPGVVSVTEIYNYYKRHGFNTVVMGASFRNTGEIIELAGCDRLTIGPALLEELANSQTEVVRKLIPTETVVDAADPLTEAQFRWEFNEDPMAVEKLAEGIRNFAIDQGKLEVMLKEKLAC

Annotated regions:
phrase: ILIKLASTWEGICAAKE
type: ACTIVE_SITE
name: Transaldolase_AS
description: Transaldolase, active site

phrase: DATTNPSL
type: ACTIVE_SITE
name: Transaldolase_AS
description: Transaldolase, active site
Protein sequence:
MQITPENTWAAVKAIRSRAPLIHNITNYVVMNSTANALLALGASPVMAHAQEEVEEMVGIAQALVVNIGTLSPSWVRAMASAALKAADRGIPIILDPVGAGATAYRTRTAFQLLETVSPTIIRGNASEILAFESVETMETRGVDSTELSQNAVDAGRRLNDSYGSTVCISGETDFIIGDRAILGIRNGHPLMTRVTGLGCTASALCGAFAAVNSSFTLAAAQAMAVMGIAGEMAAEISPGPGSLQLHFLDILYRLTEEDIARRLRIVAGE

Annotated regions:
Protein sequence:
MGAIRGPVRKIDLNCDMGESFGVYRIGADEEIMPLITSANIACGFHGGDPQVMRRTVRLAREHGVAVGAHPGYRDLVGFWRRPVRCSPDEVYADVLYQIGALAAFCRAEGVALRHVKPHGALYNTAAADAAIAGAVARAVADFDRSLMLYAPPGSALEQAGLAAGLRVIREGFADRGYAADGTLLPRTHPGAVLHEPERAAAQARGMVCSGTVTADTGEEVAVPAETLCVHGDHPSVIQVLRRIRSELEAAGVSVGAPGAD

Annotated regions:
Protein sequence:
MKRRYFGTDGIRGQSNIFPMTPDLAMRVGIAVGTIFRNGAHRHRVVIGKDTRLSGYMLENAMVAGFTAAGLDVFLLGPIPTPGVAMLTRSLRADIGVMISASHNAFRDNGIKLFGPDGYKLSDDIEQKIEDLLEQDMSGQLAKPEDIGRAKRVDGDIYRYIEQAKRTLPRDVTLKGLRIAIDCANGAAYKVAPSALWELGAEVVTIGTEPNGVNINLECGSTHPAALQKKVHEVRADIGIALDGDADRVLIVDEEGAVIDGDQLMAVIADSWAADGMLKGGGIAATVMSNLGLERYLQARRLKLHRTKVGDRYVVEQMRQDGLNVGGEQSGHIVLSDFGTTGDGLVAALQILAVVKRQGKTVSEICRRFEPVPQVLKNVRVSAGKPLEDAAVQQAIAEAEAQLAKNGRLLIRPSGTEPLIRVMAEGDDRGQVERIVDELVNVIGGVRNAA

Annotated regions:
phrase: RYIEQAKRTLPRDVTLKGLRIAIDCANGAAYKVAPSALWELGAEVVTIGTEPNGVNINLECGSTHPAALQKKVHEVRADIGIALDGDADRVLIVDEE
type: DOMAIN
name: A-D-PHexomutase_a/b/a-II
description: Alpha-D-phosphohexomutase, alpha/beta/alpha domain II

phrase: RRYFGTDGIRGQSNIFPMTPDLAMRVGIAVGTIFRNGAHRHRVVIGKDTRLSGYMLENAMVAGFTAAGLDVFLLGPIPTPGVAMLTRSLRADIGVMISASHNAFRDNGIKLFGPDGYKLSDDIEQKIEDLLEQ
type: DOMAIN
name: A-D-PHexomutase_a/b/a-I
description: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I

phrase: LKNVRVSAGKPLEDAAVQQAIAEAEAQLAKNGRLLIRPSGTEPLIRVMAEGDDRGQVERIVDELV
type: DOMAIN
name: A-D-PHexomutase_C
description: Alpha-D-phosphohexomutase, C-terminal

phrase: DGDQLMAVIADSWAADGMLKGGGIAATVMSNLGLERYLQARRLKLHRTKVGDRYVVEQMRQDGLNVGGEQSGHIVLSDFGTTGDGLVAALQILAVVKRQGKTVSEICRR
type: DOMAIN
name: A-D-PHexomutase_a/b/a-III
description: Alpha-D-phosphohexomutase, alpha/beta/alpha domain III
Protein sequence:
MKAQTKSKKVNKAWLHDHVNDTYVKLAQKEGYRARAAYKLKEIDEQLGLIKPGHVVVDLGSSPGAWSQYVRRRLSPDGAAVGQLNGVIIALDILPMEPIEGVTFLQGDFREEEVLAGLQEAVQARPVDVVVSDMAPNLSGVESVDAVRIAHLIELAVDFAVHHLKPEGALVVKLFHGSGYSQLVQLFKDTFRVVKPMKPKASRDKSSETFLVGMGLKRQG

Annotated regions:
phrase: YRARAAYKLKEIDEQLGLIKPGHVVVDLGSSPGAWSQYVRRRLSPDGAAVGQLNGVIIALDILPMEPIEGVTFLQGDFREEEVLAGLQEAVQARPVDVVVSDMAPNLSGVESVDAVRIAHLIELAVDFAVHHLKPEGALVVKLFHGSGYSQLVQLFKDTFRVVKPMKPKASRDKSSETFLVGM
type: DOMAIN
name: RNA_MeTrfase_FtsJ_dom
description: Ribosomal RNA methyltransferase, FtsJ domain
Protein sequence:
MPGQYAQSWLDWEAQSGGRSVLHGTPDEIKAMYAGLSQALKPMAPPFSENVDVTEGDVDGIKYRIYKLKGERGPLPIAFNTHGGGWMVGDLDTDHLLCGVIAEHTKSVVVNVDYRLTPDVAYPVPLEDSLKVYKWAAANASSFGGDPDKFYTIGGSAGGALALQIANKIKKDPQLKDGLKGVVALVPATTHWEAVPEKYKSKYKAVEDNKTGVPIIDGESMEIFFKYAKVDPSDPDTFTLLAEDNHKNFPPTYFASCEFDPLRDDAYVMEAALKEAGVPTKHDHYPGMPHYFWLIPTVPESKIFVENLLQGIGWILSQMKGATRSSYI

Annotated regions:
phrase: NTHGGGWMVGDLDTDHLLCGVIAEHTKSVVVNVDYRLTPDVAYPVPLEDSLKVYKWAAANASSFGGDPDKFYTIGGSAGGALALQIANKIKKDPQLKDGLKGVVALVPATTHWEAVPEKYKSKYKAVEDNKTGVPIIDGESMEIFFKYAKVDPSDPDTFTLLAEDNHKNFPPTYFASCEFDPLRDDAYVMEAALKEAGVPTKHDHYPGMPHYF
type: DOMAIN
name: AB_hydrolase_3
description: Alpha/beta hydrolase fold-3
Protein sequence:
MKVVIVTSVASLLDASIQFQKTACRHHCNYLSMQIVKEIEEFGTINEKNLEFATWKDVIQNDEIDALVFYRVKQISISTGVLYESMMRNRTKPISMFFVRDCLAFDGDPPSFRMTSCNINAYNRNKIKDLIILMNMKTCNKKIIGEFIIDNFGSVNALLSIINSNVTWVTSVINNSNGRGINIRVSNNKMLTITSFRRFVNKLKMYKTTKCASQLDNLCTEINKMDIIDKK

Annotated regions:
Protein sequence:
MTEIQNTVSNGSVHPLDELKVIANNNGLDMDDVKFARLMDERDPLRHLRGEFCYPKMGDILHTDHSIVNPSDDCVYLCGNSLGLCPKKTKEYVNVEVDKWANLGVQGHTNGDLPWAWCDEVLEEDMARIVGCQREEVSIMNGLTVNLHLLLISFYRPNKDRYKILCESKAFPSDHYAFESQSKLHGYDPKDVMVCMEPREGEFNLQTEDILSKINEEGEKIAVVCFSGVQYYTGQLFDIPTITKAGKAKGCYVGWDLAHAAGNVPLDLHNWGVDFACWCTYKYLNASAGGLAALFIHETYRDNNFPRLMGWWGHDMSTRFLMDNNMDLIPGARGYRISNTPGFLCSPLKASLEIFNKTSLTDLRRKSLLLTAYLESRILQTYKRPDGKDTKDDGDNIYIDIFTPQDPEQRGAQLSLAFNVSIQEVFKELEKRGVLCDKRYPRVIRISPVPMYCSFEDVHRFMGFLKDALAATKTSLIHVTTTLTI

Annotated regions:
Protein sequence:
MTMLKEIKKADLSAAFYPSGELAWLKLKDIMLNQVIQNPLENRLSQIYVRAHVGDKIEIYPLLSRDAEVGFNENGVEYRGVVGPFRYSVQMHFHTRGWFYDVTVDGDLEFDLVYLQDLGLAEQAAVRTNEAYMSQYIDYHVTEGATGFTVQARQNQPQNERFPAVQIGALTKIVGYATDGFDIYGTNYKLTSELANLKEKSLPSRVYQYEFAQISLQTELFTNHGETIFYGYATENQPKASGAPFENLAELKSNISEQPYQPSTKAILNKHIGTPITGETISDSWLQENFPDRIQEEQQNGALLSFFTPNYAHVVMREKEAELERPHGSILLDKVDVLNPEATLSATTYMYGAFLSQLVAGNTNMNKWNSHARNPLNILQTSGLRIYIELDSELRLLGVPSVWETSTNYSTWYYQWNGDLITVQTTLTADSKEAFVTVHSEKGHSYKLVLTNQVTMGTNEYDTTVKKEIKDGIVTYFPAEDSPILETYPALQFRVDGTYNELTDERYFAKDYVGTAGLDVFVFEPSDKATFHVQAKLSDEFSKPTEDLEANNKVIRASYDELTAQFHLNHQSTTAEKLNLTVYWYAHQMLVHYASPHGLEQYSGAAWGTRDVSQGPFEFFLATGNKAVLRKLVLTIFSHQYQDTGDWPQWFMFDKYTSIQQEESHGDVIVWPLKIIGDYLEMSGDAGILEEAIPFVDRESKTFTKEQGTLLEHIELAVKTIEARFMKGTALSNYGDGDWDDTLQPANAQLKKNMVSSWTVALTYQTFK

Annotated regions:
phrase: FPDRIQEEQQNGALLSFFTPNYAHVVMREKEAELERPHGSILLDKVDVLNPEATLSATTYMYGAFLSQLVAGNTNMNKWNSHARNPLNILQTSGLRIYIELDSELRLLGVPSVWETSTNYSTWYYQWNGDLITVQTTLTADSKEAFVTVHSEKGHSYKLVLTNQVTMGTNEYDTTVKKEIKDGIVTYFPAEDSPILETYPALQFRVDGTYNELTDERYFAKDYV
type: DOMAIN
name: SOGP_2nd
description: Glycoside phosphorylase, super sandwich domain

phrase: FYPSGELAWLKLKDIMLNQVIQNPLENRLSQIYVRAHVGDKIEIYPLLSRDAEVGFNENGVEYRGVVGPFRYSVQMHFHTRGWFYDVTVDGDLEFDLVYLQDLGLAEQAAVRTNEAYMSQYIDYHVTEGATGFTVQARQNQPQNERFPAVQIGALTKIVGYATDGFDIYGTNYKLTSELANLKEKSLPSRVYQYEFAQISLQTELFTNHGETIFY
type: DOMAIN
name: SOGP_N
description: SOGP, N-terminal domain
Protein sequence:
MGDDSLYLGGEWQFNHFSKLTSSRPDAAFAEIQRTSLPEKSPLSSETRVDLCDDLAPVARQLAPREKLPLSSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHCKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQEVQWYKMDDAEVTVCSIISVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRAKQGELKRDHPCLQAPELDEHLVERATQESTLDHWKFLQEQNKTKPEFNVGKVEGTLPPNALVIHQSKYKCGMKNHHPEQQSSLLNLSSTTRTDQESMNTGTLASLQGRTRRAKGKNKHSKRALLVCQ

Annotated regions:
phrase: AGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHCKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQEVQWYKMDDAEVTVCSIISVLSQQAYVLFYIQ
type: DOMAIN
name: USP_dom
description: Ubiquitin specific protease domain

phrase: YVLYAVLVHAGWSCHDGH
type: CONSERVED_SITE
name: USP_CS
description: Ubiquitin specific protease, conserved site

phrase: AGLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALHSPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHCKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHDGHYFSYVKAQEVQWYKMDDAEVTVCSIISVLSQQAYVLF
type: DOMAIN
name: Peptidase_C19_UCH
description: Peptidase C19, ubiquitin carboxyl-terminal hydrolase
Protein sequence:
MRVKETQKSWQNWWKGGTLILGLVIICSASSNLWVTVYYGVPVWEDANTTLFCASDAKAYSTERHNVWATHACVPTDPNPQELSLENVTENFNMWKNNMVEQMHEDIISLWDESLKPCVKLTPLCVTLSCATVNSTKTNNTSGNITGSEQMRNCSFNMTTEVSDRKKQEYALFYKLDIVKMDDKSNDSLYRMINCNVSTIKQACPKVSFDPIPIHYCAPAGFAILQCEDAEFNGTGPCKNVSTVQCTHGIKPVVSTQLLLNGSLAEGEIMIRSENITDNTKTIVVQLMKPVHITCIRPSNNTRRSISSGPGQVFYTTGEIIGGRVRQAHCNITKKDWDSMIKNVTAKLNETLGGNYTNITFQPHSGGDLEITTHSFNCRGEFFYCNTSELFNTSKLFNETVKGNNSVGNITIPCRIRQIVRMWQRVGQAMYAPPIAGPITCVSNITGLLLTRDGGNNTSPNETFRPAGGDMRDNWRSELYKYKVVKIKPLGIAPTRARRRVVGREKRAVGIGAVLFGFLGAAGSTMGAASITLTVQVRQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLKDQQLLGIWGCSGKLICTTNVPWNASWSNKSYEDIWENMTWIEWEREISNYTQQIYSLIEQSQNQQEKNEQELLALDKWASLWNWFDISKWLWYIRIFIMIVGGLIGLRIVFTVLNIINRVRQGYSPLSFQTLTHHQREPDRPGRTEEGGGEQDRDRSVRLVSGFLALAWDDLRSLSLFSYHRLR

Annotated regions:
phrase: MGAASITLTVQVRQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLKDQQLLGIWGCSGKLICTTNVPWNASWSNKSYEDIWENMTWIEWEREISNYTQQIYSLIEQSQNQQEKNEQELLALDKWASLWNWFDISKWLWYIRIFIMIVGGLIGLRIVFTVLNIINRVRQGYSPLSFQTL
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWEDANTTLFCASDAKAYSTERHNVWATHACVPTDPNPQELSLENVTENFNMWKNNMVEQMHEDIISLWDESLKPCVKLTPLCVTLSCATVNSTKTNNTSGNITGSEQMRNCSFNMTTEVSDRKKQEYALFYKLDIVKMDDKSNDSLYRMINCNVSTIKQACPKVSFDPIPIHYCAPAGFAILQCEDAEFNGTGPCKNVSTVQCTHGIKPVVSTQLLLNGSLAEGEIMIRSENITDNTKTIVVQLMKPVHITCIRPSNNTRRSISSGPGQVFYTTGEIIGGRVRQAHCNITKKDWDSMIKNVTAKLNETLGGNYTNITFQPHSGGDLEITTHSFNCRGEFFYCNTSELFNTSKLFNETVKGNNSVGNITIPCRIRQIVRMWQRVGQAMYAPPIAGPITCVSNITGLLLTRDGGNNTSPNETFRPAGGDMRDNWRSELYKYKVVKIKPLGIAPTRARRRVVGREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: VQVRQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLKDQQLLGIWGCSGKLICTTNVPWNASWSNKSYEDIWENMTWIEWEREISNYTQQIYSLIEQSQNQQEKNEQELLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MDTIGLFSVEAEHLFVEWVKKCIKKGDLTLFETLFNADPWIVNRCNKNKITVFMLICIYGRLDFLRFLFKQESYPGEIVNHYRRDKDGNSAWHYLAEKNNHLLLEEVLDYFGKNGIRVCFPNFNGVTPIMKAAMRGRTLSVLSLLKYGANPNRKDYLKGFTTWDWAVFTGHADLVKTLNKGYQKPLFMHFPLYKLDVFHRRFKKKPKIIITGCEDNVYEKLPEQNSNFLCVKKLNKYGK

Annotated regions:
phrase: NGVTPIMKAAMRGRTLSVLSLLKYGANPNRKD
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: KGFTTWDWAVFTGHADLVKTLNKGYQKPL
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: DGNSAWHYLAEKNNHLLLEEVLDYFGKNGIR
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: NGVTPIMKAAMRGRTLSVLSLLKYGANPN
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: NKITVFMLICIYGRLDFLRFLFKQESYPGEIV
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: NGVTPIMKAAMRGRTLSVLSLLKYGANPNRK
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat
Protein sequence:
MQEGKISQIIGPVVDVDFPEGQLPSILDALYIVRPDGSRLVLETQQHLGEERVRTVAMESTDGLVRGLSVVNTGKSIQVPVGSEVLGRMLNVVGEPIDGKGAVNTKKTYSIHRSAPKFEDLSTKAEMFETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVLIMELINNIAKQQSGFSVFAGVGERTREGNDLYHEMMESGVIEKTALVFGQMNEPPGARQRVALTGLSIAEYFRDEENRDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGELQDRITSTKNGSVTSVQAIYVPADDLTDPAPATAFAHLDATTVLSRSIAELGIYPAVDPLDSTSRILDPNIVGDDHYNTAQAVKQILQRYKDLQDIIAILGMDELSDEDKLVVSRARKVQRFLSQPFFVAEAFTGLAGKYVKLEETIKGFKEIIAGKHDNLPENAFYLVGTIEEAVEKAKTL

Annotated regions:
phrase: PAVDPLDST
type: ACTIVE_SITE
name: ATPase_a/bsu_AS
description: ATPase, alpha/beta subunit, nucleotide-binding domain, active site

phrase: RGGKTGLFGGAGVGKTVLIMELINNIAKQQSGFSVFAGVGERTREGNDLYHEMMESGVIEKTALVFGQMNEPPGARQRVALTGLSIAEYFRDEENRDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGELQDRITSTKNGSVTSVQAIYVPADDLTDPAPATAFAHLDATTVLSRSIAELGIYPAVDPLDSTSRILDPNIVGDDHYNTAQAVKQILQRYKDLQDIIAILGMDELSDEDKLVVSRARKVQRFLSQP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: PNIVGDDHYNTAQAVKQILQRYKDLQDIIAILGMDELSDEDKLVVSRARKVQRFLSQPFFVAEAFTGLAGKYVKLEETIKGFKEI
type: DOMAIN
name: ATP-synt_VA_C
description: ATP synthase A/B type, C-terminal domain

phrase: GIKVIDLLEPYSRGGKTGLFGGAGVGKTVLIMELINNIAKQQSGFSVFAGVGERTREGNDLYHEMMESGVIEKTALVFGQMNEPPGARQRVALTGLSIAEYFRDEENRDVLLFIDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGELQDRITSTKNGSVTSVQAIYVPADDLTDPAPATAFAHLDATTVLSRSIAELGIYPAVDPLDST
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_nucl-bd
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain

phrase: ISQIIGPVVDVDFPEGQLPSILDALYIVRPDGSRLVLETQQHLGEERVRTVAMESTDGLVRGLSVVNT
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_N
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain
Protein sequence:
MVDPVAALCNYNVLEVIFSYLELDDLSHCSQVCKSWYHFLNDENSDVWRWHCLNKLPKESLKSDLLSSVPTYKTKLRAYFHAWSPNDCSRNVYIKPNGFTLHRNPVAQSTDAARGKIGFRHGRHTWEVIWEGPLGTVAVIGISTKEAALQCHGYVALLGSDDQSWGWNLVENHLLHNGDMQGSYPLLNNAPKYQVGERIRVILDCEDNTLSFEKNYEFLGVAFRGLPDKKLYPTVSAVYGNTEVSMVYLGTPLDG

Annotated regions:
phrase: HAWSPNDCSRNVYIKPNGFTLHRNPVAQSTDAARGKIGFRHGRHTWEVIWEGPLGTVAVIGISTKEAALQCHGYVALLGSDDQSWGWNLVENHLLHNGDMQGSYPLLNNAPKYQVGERIRVILDCEDNTLSFEKNYEFLGVAFRGLPDKKLYPTVSAVYGNTEVSMVYLGTPLD
type: DOMAIN
name: SPRY_FBXO45
description: Fbxo45, SPRY domain

phrase: HGRHTWEVIWEGPLGTVAVIGISTKEAALQCHGYVALLGSDDQSWGWNLVENHLLHNGDMQGSYPLLNNAPKYQVGERIRVILDCEDNTLSFEKNYEFLGVAFRGLPDKKLYPTVSAVYGNTEVSMVYLGTP
type: DOMAIN
name: SPRY_dom
description: SPRY domain

phrase: LKSDLLSSVPTYKTKLRAYFHAWSPNDCSRNVYIKPNGFTLHRNPVAQSTDAARGKIGFRHGRHTWEVIWEGPLGTVAVIGISTKEAALQCHGYVALLGSDDQSWGWNLVENHLLHNGDMQGSYPLLNNAPKYQVGERIRVILDCEDNTLSFEKNYEFLGVAFRGLPDKKLYPTVSAVYGNTEVSMVYLGTP
type: DOMAIN
name: B30.2/SPRY
description: B30.2/SPRY domain

phrase: RHTWEVIWEGPLGTVAVIGISTKEAALQCHGYVALLGSDDQSWGWNLVENHLLHNGDMQGSYPLLNNAPKYQVGERIRVILDCEDNTLSFEKNYEFLGVAFRGLPDKKLYPTVSAVYGNTEVS
type: DOMAIN
name: SPRY_dom
description: SPRY domain

phrase: VLEVIFSYLELDDLSHCSQVCKSWYHFLNDENSDVWRWHC
type: DOMAIN
name: F-box_dom
description: F-box domain
Protein sequence:
MALTKAELAEVLFDKYGVSKQDAKVLVEDFFEEIRVALERGEQVKLSGFGNFELRTKNQRPGRNPKTGEEIPISARRVVTFKPGQKFKSRVENAEPED

Annotated regions:
phrase: GFGNFELRTKNQRPGRNPK
type: CONSERVED_SITE
name: Histone-like_DNA-bd_CS
description: Histone-like DNA-binding protein, conserved site
Protein sequence:
MLGIGAFKQRLPRPGEALPGREQALPLHNTHLVNGHPLRGEFTGLAQVQFGLGCFWGAERKFWNVPGVYTTAVGYAGGQTPNATYSEVCSGQTGHTEAVLVVFDDHAVSFAQLLRTFWESHDPTQGMQQGNDMGTQYRSAIYCTTQAQYDAALASRDAYQQQLTAAGYGEITTEIRFPAPTFYYAEDDHQQYLAKHPNGYCGLGGTGVSCPIGLDA

Annotated regions:
phrase: VQFGLGCFWGAERKFWNVPGVYTTAVGYAGGQTPNATYSEVCSGQTGHTEAVLVVFDDHAVSFAQLLRTFWESHDPTQGMQQGNDMGTQYRSAIYCTTQAQYDAALASRDAYQQQLTAAGYGEITTEIRFPAPTFYYAEDDHQQYLAKHPNGY
type: DOMAIN
name: Met_Sox_Rdtase_MsrA_dom
description: Peptide methionine sulphoxide reductase MsrA domain

phrase: QVQFGLGCFWGAERKFWNVPGVYTTAVGYAGGQTPNATYSEVCSGQTGHTEAVLVVFDDHAVSFAQLLRTFWESHDPTQGMQQGNDMGTQYRSAIYCTTQAQYDAALASRDAYQQQLTAAGYGEITTEIRFPAPTFYYAEDDHQQYLAKHPNGY
type: DOMAIN
name: Met_Sox_Rdtase_MsrA_dom
description: Peptide methionine sulphoxide reductase MsrA domain

phrase: LAQVQFGLGCFWGAERKFWNVPGVYTTAVGYAGGQTPNATYSEVCSGQTGHTEAVLVVFDDHAVSFAQLLRTFWESHDPTQGMQQGNDMGTQYRSAIYCTTQAQYDAALASRDAYQQQLTAAGYGEITTEIRFPAPTFYYAEDDHQQYLAKHPNGYCGLGGT
type: DOMAIN
name: Met_Sox_Rdtase_MsrA_dom
description: Peptide methionine sulphoxide reductase MsrA domain
Protein sequence:
MTITHTYSSTAETSPGRVAIQTESEQITYHDWDRLVSQTANWLRSQPSMPNRVAILLPNSLAFLQLFAGAAAAGCTAIPIDTRWSPAECKERLSISNADLVVTLAFFKNKLTDSQTPVVLLDNCMADISEAAADPLPTIDPEHPFYMGFTSGSTGKPKAFTRSHRSWMESFTCTETDFSISSDDKVLIPGALMSSHFLYGAVSTLFLGGTVCLLKKFSPAKAKEWLCRESISVLYTVPTMTDALARIEGFPDSPVKIISSGADWPAESKKKLAAAWPHLKLYDFYGTSELSFVTFSSPEDSKRKPHSAGRPFHNVRIEIRNAGGERCQPGEIGKIFVKSPMRFSGYVNGSTPDEWMTVDDMGYVDEEGFLYISGRENGMIVYGGLNIFPEEIERVLLACPEVESAAVVGIPDEYWGEIAVAVILGNANARTLKAWCKQKLASYKIPKKWVFADSLPETSSGKIARSRVKKWLEESVQYK

Annotated regions:
phrase: MGFTSGSTGKP
type: CONSERVED_SITE
name: AMP-binding_CS
description: AMP-binding, conserved site

phrase: TAETSPGRVAIQTESEQITYHDWDRLVSQTANWLRSQPSMPNRVAILLPNSLAFLQLFAGAAAAGCTAIPIDTRWSPAECKERLSISNADLVVTLAFFKNKLTDSQTPVVLLDNCMADISEAAADPLPTIDPEHPFYMGFTSGSTGKPKAFTRSHRSWMESFTCTETDFSISSDDKVLIPGALMSSHFLYGAVSTLFLGGTVCLLKKFSPAKAKEWLCRESISVLYTVPTMTDALARIEGFPDSPVKIISSGADWPAESKKKLAAAWPHLKLYDFYGTSELSFVTFSSPEDSKRKPHSAGRPFHNVRIEIRNAGGERCQPGEIGKIFVKSPMRFSG
type: DOMAIN
name: AMP-dep_synth/lig_dom
description: AMP-dependent synthetase/ligase domain

phrase: EIERVLLACPEVESAAVVGIPDEYWGEIAVAVILGNANARTLKAWCKQKLASYKIPKKWVFADSLPETSSG
type: DOMAIN
name: AMP-bd_C
description: AMP-binding enzyme, C-terminal domain
Protein sequence:
MSSSYINVIGAGLAGSEAAYQIAKRGIPVKLYEMRGVKSTPQHKTADFAELVCSNSLRGDALTNAVGLLKEEMRRLDSVILKSAEATRVPAGGALAVDREGFSQMVTELVTNHPLIEVIREEITEIPEDAITVIATGPLTSDALAEKIHALNGGDGFYFYDAAAPIIDVNTIDMTKVYLKSRYDKGEAAYLNAPMTKQEFMDFHDALVNAEEAPLNSFEKEKYFEGCMPIEVMAKRGIKTMLYGPMKPVGLEYPDDYQGPRDGEYKTPYAVVQLRQDNAAGSLYNIVGFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTFRSKKLPNLFFAGQMTGVEGYVESAASGLVAGINAARLFKGEEALVFPETTAIGSLPHYVTHADSKHFQPMNVNFGIIKELDGPRIRDKKERYEKIAERALQDLQPYLDK

Annotated regions:
phrase: AGQMTGVEGYVESAASGLVAGIN
type: CONSERVED_SITE
name: MnmG-rel_CS
description: MnmG-related, conserved site

phrase: INVIGAGLAGSEAAYQIAKRGIPVKLYEMRGVKSTPQHKTADFAELVCSNSLRGDALTNAVGLLKEEMRRLDSVILKSAEATRVPAGGALAVDREGFSQMVTELVTNHPLIEVIREEITEIPEDAITVIATGPLTSDALAEKIHALNGGDGFYFYDAAAPIIDVNTIDMTKVYLKSRYDKGEAAYLNAPMTKQEFMDFHDALVNAEEAPLNSFEKEKYFEGCMPIEVMAKRGIKTMLYGPMKPVGLEYPDDYQGPRDGEYKTPYAVVQLRQDNAAGSLYNIVGFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLEQTFRSKKLPNLFFAGQMTGVEGYVESAASGLVAGINAARLFKGE
type: DOMAIN
name: MnmG_N
description: MnmG, N-terminal domain
Protein sequence:
MAVNPLLTPTGQQTIPLIPSPFGPPTVDRDVLPSTVAPTDPRQFCVPSQFGSSVLPNTNMANVLSSRIYPGWGILPPESIKAVARRNEMIQRHHTARTEMEMYAIYQQRRMEKINPKGLAGLGIPFLYGSSVPAAPAAYHGRSMLPAGDLHFHRSTLRNLQGNPMLAATAPHFEESWGQRCRRLRKNTGNQKALDSDAESSKSQAEEKILGQTHAVPYEEDHYAKDPDIEAPSNQKSSETNEKPTTALANTCGELEPTHRKPWGSHTTTLKAKAWDDGKEEASEQIFATCDEKNGVCPPVPRPSLPGTHALVTIGGNLSLDEDIQKWTVDDVHSFIRSLPGCSDYAQVFKDHAIDGETLPLLTEEHLRGTMGLKLGPALKIQSQVSQHVGSMFYKKTLSFPIRQAFDQPADTSPLLDPNSWSDTMNIFCPQDTIIPKGIERGSMRN

Annotated regions:
phrase: WTVDDVHSFIRSLPGCSDYAQVFKDHAIDGETLPLLTEEHLRGTMG
type: DOMAIN
name: SAM
description: Sterile alpha motif domain

phrase: KWTVDDVHSFIRSLPGCSDYAQVFKDHAIDGETLPLLTEEHLRGTMGLKLGPALKIQSQV
type: DOMAIN
name: SAM
description: Sterile alpha motif domain

phrase: IQKWTVDDVHSFIRSLPGCSDYAQVFKDHAIDGETLPLLTEEHLRGTMGLKLGPALKIQSQVSQHVG
type: DOMAIN
name: SAM
description: Sterile alpha motif domain
Protein sequence:
MEILMASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIAANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDFACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPRAQYVLAEQVTRLVHGEDGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLICWK

Annotated regions:
phrase: DLMQALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNY
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: DFEQLAQDGVPMVEMEKGADLMQALVDSELQPSRGQARKTIASNAITINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCL
type: DOMAIN
name: SYY-like_C
description: Tyrosine--tRNA ligase SYY-like, C-terminal domain

phrase: PTADSLHLGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site