nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MADYTPMMQQYLQIKEEQQDAILFFRLGDFYEMFFEDARIASRELEIVLTARDGGAGSKIPMCGVPYHSVDNYLARLINRGYKVAICEQVEDPREAKGIVKREVTRIVTPGTIIEEQLLDQAKNNFLAAVEEEPLCTGIAYIDISTGEFWLSEIAGENARSRVESEILRISPAECLLAGSGSLTGSWEEEWLRQQNITLTVWDELPLSLERAESLLLRQLQVASLESFGLKSYSAGIKAAARIIAFLEETQKTSLQHIKSLRCYSSDNFLEMDFYSRRNLELTATLREGKREGSLLSILDESRTAMGKRLLRRWIEQPLREAGEIEERLDAVDELKNTLSLRTELTPLLSRINDLERLGGKIGASVASPRDLLGLKSSLAVINDIKKALQPCRSEILQRLAAMDALEEVFALIDASINDEAPLGIKEGELIKTGYKQEIDELRELSQEGSNWLVEFENREKQRTGIKNLKVGFNKVFGYYIEITKSNLSLAPADYHRKQTLVNSERFISDELKQYEEKILGSRERLYSLEYQEFIKIREALIPYLPRVMETAHAIAILDVLQGLAEVAYQNNYIRPEIDNSGKIRIRAGRHPVVEKALREARFVPNDLQLDRDKARFAIITGPNMGGKSTFMRQAALLVLMAQMGSFIPAEEARIGLVDKIFTRVGASDDLAAGQSTFMVEMIEVANILNNASDNSLVILDEIGRGTSTYDGLSIAQAVSEYLLENSRSKVLFATHYHQLTRLAEKLPGIINLSVSVKETGNTVVFLKKVLPGKADKSYGLHVARLAGLPEKLIIRAEDILQGLEKNKDSRPAPTLLQPLLFSDSHPVVDELKQLHIDDLSPREALQLLYQWQKMLDDK

Annotated regions:
phrase: SLVILDEIGRGTSTYD
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: NFLAAVEEEPLCTGIAYIDISTGEFWLSEIAGENARSRVESEILRISPAECLLAGSGSLTGSWEEEWLRQQNITLTVWDELPLSLERAESLLLRQLQVASLESFGLKSYSAGIKAAARIIAFLEETQKTSLQHI
type: DOMAIN
name: DNA_mmatch_repair_MutS_con_dom
description: DNA mismatch repair protein MutS, connector domain

phrase: GYKQEIDELRELSQEGSNWLVEFENREKQRTGIKNLKVGFNKVFGYYIEITKSNLSLAPADYHRKQTLVNSERFISDELKQYEEKILGSR
type: DOMAIN
name: DNA_mismatch_repair_MutS_clamp
description: DNA mismatch repair protein MutS, clamp

phrase: TPMMQQYLQIKEEQQDAILFFRLGDFYEMFFEDARIASRELEIVLTARDGGAGSKIPMCGVPYHSVDNYLARLINRGYKVAICEQVEDPREAKGIVKREVTRIVTPGTIIE
type: DOMAIN
name: DNA_mismatch_repair_MutS-lik_N
description: DNA mismatch repair protein MutS-like, N-terminal

phrase: ARFAIITGPNMGGKSTFMRQAALLVLMAQMGSFIPAEEARIGLVDKIFTRVGASDDLAAGQSTFMVEMIEVANILNNASDNSLVILDEIGRGTSTYDGLSIAQAVSEYLLENSRSKVLFATHYHQLTRLAEKLPGIINLSVSVKETGNTVVFLKKVLPGKADKSYGLHVARLAGLPEKLIIRAEDIL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: IITGPNMGGKSTFMRQAALLVLMAQMGSFIPAEEARIGLVDKIFTRVGASDDLAAGQSTFMVEMIEVANILNNASDNSLVILDEIGRGTSTYDGLSIAQAVSEYLLENSRSKVLFATHYHQLTRLAEKLPGIINLSVSVKETGNTVVFLKKVLPGKADKSYGLHVARLAGLPEKLIIRAEDILQGL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: KREGSLLSILDESRTAMGKRLLRRWIEQPLREAGEIEERLDAVDELKNTLSLRTELTPLLSRINDLERLGGKIGASVASPRDLLGLKSSLAVINDIKKALQPCRSEILQRLAAMDALEEVFALIDASINDEAPLGIKEGELIKTGYKQEIDELRELSQEGSNWLVEFENREKQRTGIKNLKVGFNKVFGYYIEITKSNLSLAPADYHRKQTLVNSERFISDELKQYEEKILGSRERLYSLEYQEFIKIREALIPYLPRVMETAHAIAILDVLQGLAEVAYQNNYIRPEIDNSGKIRIRAGRHPVVEK
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: SRRNLELTATLREGKREGSLLSILDESRTAMGKRLLRRWIEQPLREAGEIEERLDAVDELKNTLSLRTELTPLLSRINDLERLGGKIGASVASPRDLLGLKSSLAVINDIKKALQPCRSEILQRLAAMDALEEVFALIDASINDEAPLGIKEGELIKTGYKQEIDELRELSQEGSNWLVEFENREKQRTGIKNLKVGFNKVFGYYIEITKSNLSLAPADYHRKQTLVNSERFISDELKQYEEKILGSRERLYSLEYQEFIKIREALIPYLPRVMETAHAIAILDVLQGL
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core
Protein sequence:
MALQRTHSLLLLLLLTLLGLGLVQPSYGQDGMYQRFLRQHVHPEETGGNDRYCNLMMQRRKMTLYHCKRFNTFIHEDIWNIRSICSTTNIQCKNGKTNCHEGVVKVTDCRDTGSSRAPNCRYRAMASTRRVVIACEGNPQVPVHFDG

Annotated regions:
phrase: CKRFNT
type: ACTIVE_SITE
name: RNaseA_AS
description: Ribonuclease A, active site

phrase: QDGMYQRFLRQHVHPEETGGNDRYCNLMMQRRKMTLYHCKRFNTFIHEDIWNIRSICSTTNIQCKNGKTNCHEGVVKVTDCRDTGSSRAPNCRYRAMASTRRVVIACEGNPQVPVHFD
type: DOMAIN
name: RNaseA_domain
description: Ribonuclease A-domain

phrase: YQRFLRQHVHPEETGGNDRYCNLMMQRRKMTLYHCKRFNTFIHEDIWNIRSICSTTNIQCKNGKTNCHEGVVKVTDCRDTGSSRAPNCRYRAMASTRRVVIACEGNPQVPVHF
type: DOMAIN
name: RNaseA_domain
description: Ribonuclease A-domain
Protein sequence:
MLLNDQKFLPINIHYLNQGRFDLNKLKNFNLLINQRENWRFFLINGLKLAFKEFEHFKIKNNNFIIDIVFQEKFLFFKQIRQAYLKKVETFGYNIFIPIIITQKILNKKNNLNLTFFKWLDLGILPSLSPKTSFYIDGISRAVSTQKKKSPGLMFDFDLTKKSSLEKREGEAFLKIIAPRGSWFKISYSEDHIIFIEIRNIAYKIPIFTFLCALGFSLESIFQFFNYNINNFKLIPNKYDNTNALIKARNDIFILYSDLLPLLNKTKKNFEIKYIINHYFFSYIWNSNTRYCGEATRLHLYNKVGSPLSLNSLFLEEIDFIYITKIFIYRLINNNFKDENNDNLKNMRFRNGGDYIYLQTRQGLFDFESFLNINLHNIENNSFFCNITTNKKKEDIYSIKKKKNIKNFNLSKISFLKHILLKSWKSFFLSGTLSQFAENLNPLSYITHARRFTSLGPGSLKKAEASIEVRSINPSYNGRVCPIETPEGFNAGLVHSFSLYSFKGVNGELLLPFYFIYKNIKQSYYLPPIFFNIEEESNQSIITGDLIHEKWNDFLNKKLSLRNNFHLDKNDISKISFQSLSPYHMISLATSLIPFLEHNDANRALMGSNMQRQTVPVLGAHNFIVRTGLDTKFFSDISSIPISQINGFNFESNNNYCYFYKIDNLITLNNISYNYIKKTNHNSLYINESIKKKNPWHQQGDFLINNSVIENGKLALGPNLLLAYLPWHGYNYEDAVIINERCVSQKILTSLHIITLTNSLELAYREINKKKEFFYEVPVKLEILFSFFAPFYYNLKYYKNQEFSQFEKKNPSYYTNNINIGTFLKKGDCIFSKCRIRFSFSRELRLQYKELFILLREAFPTFEDFKNFANIFAYDKYKQKLDRKKQKKNTRLKTDNFIFNKNSTLFKKHKLKALINYYNIEDSTIYAQKNQEGLIISKHLKKVPMTYTSITPFDLEEFLSTKESKKKEYYNLFFTKSINIEILQLRDIQLGDKCAGRHGNKGIISKICPINEMPLLPDGTPIDIILNPLGIPSRMNVGQIFESLLGLAGFYLNETYTINIFDEQFGLEASRSFVLSKLYKASILSNKPWLFLKKNAGKTNIIDGLTGKYFQQPITIGYSSILKLIHMVTDKLHGRSIGGYSTLTLQPTKGKSLLGGQRVGEMELWALQGYGASWALQELYTLKSDLVEARQHFQNYINSFNIESNIYDRNDISLTELESLIISDTFKPYTLECFLEDLKALCIYIDY

Annotated regions:
phrase: GGQRVGEMELWALQGYGASWALQELYTLKSDLVEARQHFQNYINSFNIESNIYDRNDISLTELESLIISDTFKPYTLECFLEDLKALCIY
type: DOMAIN
name: RNA_pol_Rpb2_7
description: RNA polymerase Rpb2, domain 7

phrase: TSLIPFLEHNDANRALMGSNMQRQTVPVLGAHNFIVRTGLDTKFFSDISSIPISQINGFNFESNNNYCYFYKIDNLITLNNISYNYIKKTNHNSLYINESIKKKNPWHQQGDFLINNSVIENGKLALGPNLLLAYLPWHGYNYEDAVIINERCVSQKILTSLHIITLTNSLELAYREINKKKEFFYEVPVKLEILFSFFAPFYYNLKYYKNQEFSQFEKKNPSYYTNNINIGTFLKKGDCIFSKCRIRFSFSRELRLQYKELFILLREAFPTFEDFKNFANIFAYDKYKQKLDRKKQKKNTRLKTDNFIFNKNSTLFKKHKLKALINYYNIEDSTIYAQKNQEGLIISKHLKKVPMTYTSITPFDLEEFLSTKESKKKEYYNLFFTKSINIEILQLRDIQLGDKCAGRHGNKGIISKICPINEMPLLPDGTPIDIILNPLGIPSRMNVGQIFESLLGLAGFYLNETYTINIFDEQFGLEASRSFVLSKLYKASILSNKPWLFLKKNAGKTNIIDGLTGKYFQQPITIGYSSILKLIHMVTDKLHGRSIGGYSTLTLQPTKGK
type: DOMAIN
name: DNA-dir_RNAP_su2_dom
description: DNA-directed RNA polymerase, subunit 2, hybrid-binding domain

phrase: QFAENLNPLSYITHARRFTSLGPGSLKKAEASIEVRSINPSYNGRVCPIETPEGFNAGLVHSFSLY
type: DOMAIN
name: RNA_pol_Rpb2_3
description: RNA polymerase Rpb2, domain 3
Protein sequence:
MAKVAVWKPSILVLPRGLARWEVREAYVLAETAGYRVVDVLYYRRVSSSKLLSDAKLEELAEKAKSLVGNEYARIIVYDNLKPREYFRIVKATGVNTIDRTMLILEIFSLHAGSREAKLQIELARLRHELPLVREAIRLSKLKELPGFLGPGGYAIDAYYRYMVSRIAKIKRELRELRRRHEIERSKRRSAGLPHIAIVGYASAGKTSLFNAITGLQKPVGPEYFTTITPKRRAISFNGLRTVFIDTVGFIMRIPPEIIEAFHSTLEEAATADVILYVVDVSEPDTVIAEKLDEGLQTLRRIGVIDKPLIIAANKIDLVPQEDIERLTRLLEGAASTLYPALEAVIPVSAKTGAGVAKLLCRIATLLAGTKGSTC

Annotated regions:
phrase: PHIAIVGYASAGKTSLFNAITGLQKPVGPEYFTTITPKRRAISFNGLRTVFIDTVGFIMRIPPEIIEAFHSTLEEAATADVILYVVDVSEPDTVIAEKLDEGLQTLRRIGVIDKPLIIAANKIDLVPQEDIERLTRLLEGAASTLYPALEAVIPVSAKTGAGVAKLLCRIATLLAGT
type: DOMAIN
name: G_HFLX_dom
description: HflX-type guanine nucleotide-binding (G) domain

phrase: VREAYVLAETAGYRVVDVLYYRRVSSSKLLSDAKLEELAEKAKSLVGNEYARIIVYDNLKPREYFRIVKATGVNTIDRTMLILEI
type: DOMAIN
name: GTPase_HflX_N
description: GTPase HflX, N-terminal

phrase: YAIDAYYRYMVSRIAKIKRELRELRRRHEIERSKRRSAGLPHIAIVGYASAGKTSLFNAITGLQKPVGPEYFTTITPKRRAISFNGLRTVFIDTVGFIMRIPPEIIEAFHSTLEEAATADVILYVVDVSEPDTVIAEKLDEGLQTLRRIGVIDKPLIIAANKIDLVPQEDIERLTRLLEGAASTLYPALEAVIPVSAKTGAGVAKLLCRIATL
type: DOMAIN
name: G_HFLX_dom
description: HflX-type guanine nucleotide-binding (G) domain

phrase: IAIVGYASAGKTSLFNAITG
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: QKPVGPEYFTTITPKRRA
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: FHSTLEEAATADVILYVV
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: HAGSREAKLQIELARLRHELPLVREAIRLSKLKELPGFLGPGGYAIDAYYRYMVSRIAKIKRELRELRRRHEIERSK
type: DOMAIN
name: GTP-bd_M
description: GTP-binding protein, middle domain

phrase: HIAIVGYASAGKTSLFNAITGLQKPVGPEYFTTITPKRRAISFNGLRTVFIDTVGFIMRIPPEIIEAFHSTLEEAATADVILYVVDVSEPDTVIAEKLDEGLQTLRRIGVIDKPLIIAAN
type: DOMAIN
name: GTP-bd
description: GTP binding domain
Protein sequence:
MARLKEIYRKEIAPKLKEELKLANVMEVPRITKITLNMGLGEAIGDKKVIENAVADLEKITGQKVVVTHARKSIAGFKVREGWPIGVKVTLRRERMYEFLDRLLSISLPRVRDFRGLNAKSFDGRGNYSMGVKEQIIFPEIDYDKIDALRGLDITLTTTARNDDEGRALLRAFNFPFRN

Annotated regions:
phrase: LEKITGQKVVVTHARK
type: CONSERVED_SITE
name: Ribosomal_uL5_CS
description: Large ribosomal subunit protein uL5, conserved site

phrase: NVMEVPRITKITLNMGLGEAIGDKKVIENAVADLEKITGQKVVVTHARKSIAGFKV
type: DOMAIN
name: Ribosomal_uL5_N
description: Large ribosomal subunit protein uL5, N-terminal

phrase: PIGVKVTLRRERMYEFLDRLLSISLPRVRDFRGLNAKSFDGRGNYSMGVKEQIIFPEIDYDKIDALRGLDITLTTTARNDDEGRALLRAFNFP
type: DOMAIN
name: Ribosomal_uL5_C
description: Large ribosomal subunit protein uL5, C-terminal
Protein sequence:
MPEAEKLATVSIEDVQARQDSRRIPINKVGIKDIRHPVRVGGRDGQEQHTVANFSMYVNLPQHFKGTHMSRFVQILEGHDTEITVQSFREMLHEVAERLEAESGHIEMAFPLFVRKTAPVTGVQSLMDYQVAFIGEIHEGEPELAIRVVVPVTSLCPCSKEISRYGAHNQRSHVTVTAKTRDLLWVEDLIDLVEEEASCELYGLLKRPDEKYVTERAYENPKFVEDLVRDVAIRLNDEDRVLAYNVTAENFESIHNHSAFAEIEHDKTGEPRR

Annotated regions:
Protein sequence:
MHISMFDFSIYIKFFVSLCALVNPIGMIPIFTTMTNHQSHLERKKTNLVANFSAFIILLISLFAGNSILNAFGISINSFRIAGGILIISIAFSMISGKFTKNNKTSKEKNQENISVVPLAMPLIAGPGAISSTIVWSTYYSTWSDFLGCSIAIFLFAFVCWLCFRAAPCVVEILGKTGINIITRIMGLLLMSLGIEFLSIGIKSIFSALLH

Annotated regions:
Protein sequence:
MTRDEARAKIIFALDVNEFSDVEKWADLLSPHVGMFKVGKQLYTACGPAVVRMIQKYGGEVFLDLKYHDIPNTVAMASLEAARMGVKLFNLHALGGYEMMAKTVETLDKEFKGEERGKVLAVTILTSSNEQTLQEVGINLPVPEMVVKLAALAKKAGIDGVVASPQEVPLIREACGNDFLIVTPGVRPAFAAADDQKRIMTPAEAVKSGADYLVIGRPIAAAPNPAEAAQAIVAEIVAG

Annotated regions:
phrase: VFLDLKYHDIPNT
type: ACTIVE_SITE
name: OMPdecase_AS
description: Orotidine 5'-phosphate decarboxylase, active site

phrase: KIIFALDVNEFSDVEKWADLLSPHVGMFKVGKQLYTACGPAVVRMIQKYGGEVFLDLKYHDIPNTVAMASLEAARMGVKLFNLHALGGYEMMAKTVETLDKEFKGEERGKVLAVTILTSSNEQTLQEVGINLPVPEMVVKLAALAKKAGIDGVVASPQEVPLIREACGNDFLIVTPGVRPAFAAADDQKRIMTPAEAVKSGADYLVIGRPIAAAPNPAEAAQA
type: DOMAIN
name: OMPdeCOase_dom
description: Orotidine 5'-phosphate decarboxylase domain

phrase: KIIFALDVNEFSDVEKWADLLSPHVGMFKVGKQLYTACGPAVVRMIQKYGGEVFLDLKYHDIPNTVAMASLEAARMGVKLFNLHALGGYEMMAKTVETLDKEFKGEERGKVLAVTILTSSNEQTLQEVGINLPVPEMVVKLAALAKKAGIDGVVASPQEVPLIREACGNDFLIVTPGVRPAFAAADDQKRIMTPAEAVKSGADYLVIGRPIAAAPNPAEAAQA
type: DOMAIN
name: OMPdeCOase_dom
description: Orotidine 5'-phosphate decarboxylase domain
Protein sequence:
MATLLSERGAQASWRDYLELTKPKVVLLMLITSLVGMFLATRAGVPWTVLLFGNLGIALCAGGAAAVNHVVDRQIDSVMARTHKRPLAEGRVSPAAALTFAFVLGVSGLALLLTFTNALAAWLTLASLIGYAVIYTGFLKRATPQNIVIGGLAGAAPPLLGWVAVTGQVTAEPLLLVLIIFAWTPPHFWALAIHRKDEYAKVNVPMLPVTHGVHYTKVHILLYTAMLLAVSFMPFAIHMSGPLYLAAAVLLGARFLYWTIALYRDSRPHAAIKTFKFSIWYLFALFIALLVDHYLLLDF

Annotated regions:
phrase: NHVVDRQIDSVMARTHKRPLAE
type: CONSERVED_SITE
name: UbiA_prenylTrfase_CS
description: UbiA prenyltransferase conserved site
Protein sequence:
MTTKSKHIILSLTFLLLFLSTVFSSHVTQRFTSSDDITELVVTALNQTISNVNLSSSNFSDLLQRLGSNLSHRDLCAFDDCLELLDDTVFDLTTAISKLRSHSPELHNVKMLLSAAMTNTRTCLDGFASSDNDENLNNNDNKTYGVAESLKESLFNISSHVSDSLAMLENIPGHIPGKVKEDVGFPMWVSGSDRNLLQDPVDETKVNLVVAQNGTGNYTTIGEAISAAPNSSETRFVIYIKCGEYFENIEIPREKTMIMFIGDGIGRTVIKANRSYADGWTAFHSATVGVRGSGFIAKDLSFVNYAGPEKHQAVALRSSSDLSAYYRCSFESYQDTIYVHSHKQFYRECDIYGTVDFIFGDASVVFQNCSLYARRPNPNQKIIYTAQGRENSREPTGISIISSRILAAPDLIPVQANFKAYLGRPWQLYSRTVIMKSFIDDLVDPAGWLKWKDDFALETLYYGEYMNEGPGSNMTNRVQWPGFKRIETVEEASQFSVGPFIDGNKWLNSTRIPFTLDL

Annotated regions:
phrase: SDDITELVVTALNQTISNVNLSSSNFSDLLQRLGSNLSHRDLCAFDDCLELLDDTVFDLTTAISKLRSHSPELHNVKMLLSAAMTNTRTCLDGFASSDNDENLN
type: DOMAIN
name: Pectinesterase_inhib_dom
description: Pectinesterase inhibitor domain

phrase: IYGTVDFIF
type: ACTIVE_SITE
name: Pectinesterase_Asp_AS
description: Pectinesterase, Asp active site

phrase: NLVVAQNGTGNYTTIGEAISAAPNSSETRFVIYIKCGEYFENIEIPREKTMIMFIGDGIGRTVIKANRSYADGWTAFHSATVGVRGSGFIAKDLSFVNYAGPEKHQAVALRSSSDLSAYYRCSFESYQDTIYVHSHKQFYRECDIYGTVDFIFGDASVVFQNCSLYARRPNPNQKIIYTAQGRENSREPTGISIISSRILAAPDLIPVQANFKAYLGRPWQLYSRTVIMKSFIDDLVDPAGWLKWKDDFALETLYYGEYMNEGPGSNMTNRVQWPGFKRIETVEEASQFSVGPFIDG
type: DOMAIN
name: Pectinesterase_cat
description: Pectinesterase, catalytic

phrase: TSSDDITELVVTALNQTISNVNLSSSNFSDLLQRLGSNLSHRDLCAFDDCLELLDDTVFDLTTAISKLRSHSPELHNVKMLLSAAMTNTRTCLDGFASSDNDENLNNNDNKTYGVAESLKESLFNISSHVSDSLA
type: DOMAIN
name: Pectinesterase_inhib_dom
description: Pectinesterase inhibitor domain

phrase: KSKHIILSLTFLLLFLSTVFSSHVTQRFTSSDDITELVVTALNQTISNVNLSSSNFSDLLQRLGSNLSHRDLCAFDDCLELLDDTVFDLTTAISKLRSHSPELHNVKMLLSAAMTNTRTCLDGFASSDNDENLNNNDNKTYGVAESLKESLFNISSHVSDSLA
type: DOMAIN
name: Pectinesterase_inhib_dom
description: Pectinesterase inhibitor domain
Protein sequence:
MAGHSKWKTIKRAKAATDNKRGALFTRLIREITMAAKLGGGDAGGNPRLRTAIDNAKAVSMPKDNIDRAIKKGTGELEGVDYVEVLYEAYGPGGVAIMIAAVTDNPTRTVADVRHKLSRNHGNMGTINSVAFMFDRKGQMSVAAEGVAEEALMEAALEAGADDVVNDGESFVISTDPGALHATKEGLEGRKYKVENAELAWVPKNTVKVEGENATQLLKLLEALEELDDVQKVDANFEMDDDTMADA

Annotated regions:
phrase: SKWKTIKRAKAATDNKRGALFTRLIREITMAAKLGGGDAGGNPRLRTAIDNAKAVSMPKDNIDRAIKKGTG
type: DOMAIN
name: TACO1_YebC_N
description: TACO1/YebC-like, N-terminal domain

phrase: YVEVLYEAYGPGGVAIMIAAVTDNPTRTVADVRHKLSRNHGNMGTINSVAFMFDRKGQMSVAAEGVAEEALMEAALEAGADDVVNDGESFVISTDPGALHATKEGLEGRKYKVENAELAWVPKNTVKVEGENATQLLKLLEALEELDDVQKVDAN
type: DOMAIN
name: TACO1_YebC-like_2nd/3rd_dom
description: TACO1/YebC-like, second and third domains
Protein sequence:
MTRFEFFDHTADIGIIAYGRSLEEAFESAALAVFEVMTDTSKIEYKVEVEIEEIGSDLENLLYRWIESLLVYYDSDLLLFGKFKVSIDLNNMTLKGKAYGEKFNPEKHERRTVVKAMTYHEMLISQNDGTYILRFVVDI

Annotated regions:
phrase: FEFFDHTADIGIIAYGRSLEEAFESAALAVFEVMTDTSKIEYKVEVEIEEIGSDLENLLYRWIESLLVYYDSDLLLFGKFKVSIDLNNMTLKGKAYGEKFNPEKHERRTVVKAMTYHEMLISQNDGTYILRFVVD
type: DOMAIN
name: Archease_dom
description: Archease domain
Protein sequence:
MSQKVAKEGPRLSKNQKFSEHFSIHCCPPFTFLNSKREIVDRKYSICKSGCFYQKKEEDWICCACQKTSRRATSPQKPKHQPAASPVVVRAPPAKPKSPPRPAKPRSPPIPAKPRSPSRTERQPRPRPEVRPPPAKQKPPQKSKQPARSSPLRGPGTSRGGSPTRAPRFW

Annotated regions:
phrase: RLSKNQKFSEHFSIHCCPPFTFLNSKREIVDRKYSICKSGCFYQKKEEDWICCACQK
type: DOMAIN
name: FYVE_2
description: FYVE-type zinc finger
Protein sequence:
MSSTWIKFLFILTLVLLPYFVAESAVASPESLRKVPNCTLYKSESDCSRTLIPVCADNQMTYYNACYFCLEQLVSPIKYKYHGICTKE

Annotated regions:
phrase: CSRTLIPVCADNQMTYYNACYF
type: DOMAIN
name: Kazal_dom
description: Kazal domain

phrase: LRKVPNCTLYKSESDCSRTLIPVCADNQMTYYNACYFCLEQLVSPIKYKYHGICT
type: DOMAIN
name: Kazal_dom
description: Kazal domain

phrase: CTLYKSESDCSRTLIPVCADNQMTYYNACYFCLEQ
type: DOMAIN
name: Kazal_dom
description: Kazal domain
Protein sequence:
MSDQFDAKAFLKTVTSQPGVYRMYDAGGTVIYVGKAKDLKKRLSSYFRSNLASRKTEALVAQIQQIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSYPFIFLSGDTHPRLAMHRGAKHAKGEYFGPFPNGYAVRETLALLQKIFPIRQCENSVYRNRSRPCLQYQIGRCLGPCVEGLVSEEEYAQQVEYVRLFLSGKDDQVLTQLISRMETASQNLEFEEAARIRDQIQAVRRVTEKQFVSNTGNDLDVIGVAFDAGMACVHVLFIRQGKVLGSRSYFPKVPGGTELSEVVETFVGQFYLQGSQMRTLPGEILLDFNLSDKTLLADSLSELAGRKINVQTKPRGDRARYLKLARTNAATALISKLSQQSTVHQRLTALASVLKLPEVKRMECFDISHTMGEQTVASCVVFDANGPLRAEYRRYNITGITPGDDYAAMNQVLRRRYGKAIDDSKIPDVILIDGGKGQLAQAKNVFAELDVSWDKNHPLLLGVAKGADRKAGLETLFFEPEGEGFSLPPDSPALHVIQHIRDESHDHAIGGHRKKRAKVKNTSSLETIEGVGPKRRQMLLKYMGGLQGLRNASVEEIAKVPGISQGLAEKIFWSLKH

Annotated regions:
phrase: QPGVYRMYDAGGTVIYVGKAKDLKKRLSSYFRSNLASRKTEALVAQIQQIDVTVTHTETEALLLEHNYIKLYQPRYN
type: DOMAIN
name: GIY-YIG_UvrC_Cho
description: UvrC/Cho-like, GIY-YIG domain

phrase: SVLKLPEVKRMECFDISHTMGEQTVASCVVFDANGPLRAEYRRYNITGITPGDDYAAMNQVLRRRYGKAIDDSKIPDVILIDGGKGQLAQAKNVFAELDVSWDKNHPLLLGVAKGADRKAGLETLFFEPEGEGFSLPPDSPALHVIQHIRDESHDHA
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: SSLETIEGVGPKRRQMLLK
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: EEIAKVPGISQGLAEKIFW
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: PGVYRMYDAGGTVIYVGKAKDLKKRLSSYFRSNLASRKTEALVAQIQQIDVTVTHTETEALLLEHNYIKLYQPRY
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: QPGVYRMYDAGGTVIYVGKAKDLKKRLSSYFRSNLASRKTEALVAQIQQIDVTVTHTETEALLLEHNYIKLYQPRYNVLLR
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: DQVLTQLISRMETASQNLEFEEAARIRDQIQAVRR
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: SQPGVYRMYDAGGTVIYVGKAKDLKKRLSSYFRSNLASRKTEALVAQIQQIDVTVTHTETEALLLEHNYIKLYQPRYN
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: VIGVAFDAGMACVHVLFIRQGKVLGSRSYFPKVPGGTELSEVVETFVGQFYLQGSQMRTLPGEILLDFNLSDKTLLADSLSELAGRKINVQTKPRGDRARYLKLARTNAATALISKLSQQSTVHQRLTALASVLKLPEVKRMECFDISHTMGEQTVASCVVFDANGPLRAEYRRYNITGITPGDDYAAMNQVLRRRYGKAIDDSKIPDVILIDGGKGQLAQAKNV
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: QVLTQLISRMETASQNLEFEEAARIRDQIQAV
type: DOMAIN
name: UVR_dom
description: UVR domain
Protein sequence:
MKIYIDGEWRDSSSGETIKKYNPSTGEVLDTFPAATRNDVDAAIDSAEDAFKRWSDMTSMERSKILYKALELISKDKDQLTDLLIKENGKVKREAMDETEGVIDQLQYYTEFERKLTGDIVEGTSNKRKIFQYKVPYGIVIAITPWNFPAAMVIRKLAPALLTGNTVILKPSSDTPLTAEWLVKKFVDAGIPKGVLNLITGKGSEIGDYIVEHKKVSLITMTGSTSTGQRIMEKASKNMAKLILELGGKAPFMVWKDANIERALKSLVWAKYLNVGQSCIAAERLYIHEDIYDEFMKKFIEVSKRIKLGDPESSDMGPLINKSAVETTEKYVDIARSSGYKILLGGKKPELSGKYKNGYFYEPTIIENVPQDSPLFQEEIFGPVIGAESVSSVDELYEKANDSKYGLASYLFTEDPELIFEASEKIRFGELYVNMPGPEASQGYHTGFRLTGQAGEGSKYGISEYLKLKNVYVDYSRGNLSISTVNDDLFKNL

Annotated regions:
phrase: WRDSSSGETIKKYNPSTGEVLDTFPAATRNDVDAAIDSAEDAFKRWSDMTSMERSKILYKALELISKDKDQLTDLLIKENGKVKREAMDETEGVIDQLQYYTEFERKLTGDIVEGTSNKRKIFQYKVPYGIVIAITPWNFPAAMVIRKLAPALLTGNTVILKPSSDTPLTAEWLVKKFVDAGIPKGVLNLITGKGSEIGDYIVEHKKVSLITMTGSTSTGQRIMEKASKNMAKLILELGGKAPFMVWKDANIERALKSLVWAKYLNVGQSCIAAERLYIHEDIYDEFMKKFIEVSKRIKLGDPESSDMGPLINKSAVETTEKYVDIARSSGYKILLGGKKPELSGKYKNGYFYEPTIIENVPQDSPLFQEEIFGPVIGAESVSSVDELYEKANDSKYGLASYLFTEDPELIFEASEKIRFGELYVNMPGPEASQGYHTGFRLTGQAGEGSKYGISEYLKLKN
type: DOMAIN
name: Aldehyde_DH_dom
description: Aldehyde dehydrogenase domain

phrase: LELGGKA
type: CONSERVED_SITE
name: Ald_DH_CS_GLU
description: Aldehyde dehydrogenase, glutamic acid active site
Protein sequence:
MKNLRNRSFLTLLDFSRQEVEFLLTLSEDLKRAKYIGTEKPMLKNKNIALLFEKDSTRTRCAFEVAAHDQGANVTYLGPTGSQMGKKETTKDTARVLGGMYDGIEYRGFSQRTVETLAEYSGVPVWNGLTDEDHPTQVLADFLTAKEVLKKDYADINFTYVGDGRNNVANALMQGAAIMGMNFHLVCPKELNPTDELLNRCKNIAAENGGNILITDNIDQGVKGSDVIYTDVWVSMGEPDEVWKERLELLKPYQVNKEMMDKTGNPNVIFEHCLPSFHNADTKIGQQIFEKYGIREMEVTDEVFESKASVVFQEAENRMHTIKAVMVATLGEF

Annotated regions:
phrase: DINFTYVGDGRNNVANALMQGAAIMGMNFHLVCPKELNPTDELLNRCKNIAAENGGNILITDNIDQGVKGSDVIYTDVWVSMGEPDEVWKERLELLKPYQVNKEMMDKTGNPNVIFEHCLPSFHNADTKIGQQIFEKYGIREMEVTDEVFESKASVVFQEAENRMHTIKAVMV
type: DOMAIN
name: Asp_carbamoyltransf_Asp/Orn-bd
description: Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain

phrase: RSFLTLLDFSRQEVEFLLTLSEDLKRAKYIGTEKPMLKNKNIALLFEKDSTRTRCAFEVAAHDQGANVTYLGPTGSQMGKKETTKDTARVLGGMYDGIEYRGFSQRTVETLAEYSGVPVWNGLTDEDHPTQVLADFLTAK
type: DOMAIN
name: Asp/Orn_carbamoyltranf_P-bd
description: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding
Protein sequence:
MMDHLASTSDTPSPVSTPAQTETIVLVGLMGAGKTTIGRRVATRLDLPFVDADVEIERAAGCTISEIFTRHGEPAFRDGERRVIKRLLQGPPCVLATGGGAFMDTQTRILVRQHARSVWLRCALPVLARRLSGRQGRPLLAQGDHKTILAALQAVRHPIYAEADIIVDCGDDSVDTSARRVLEALEQHRHPVRVPVQLDTHRYDVTIGADLISRAGAFLAPVLPQKRAIVITDRNVAALHLPRLMTALAETGVEARDFVVPGGEESKSLAQYGALIDDIITAGIERRTTVIGLGGGVVGDLAGFVAATVLRGVPFVQIPTTLLAQVDSSVGGKTGINARSGKNLIGAFHQPLAVLADSSALATLSRRERVAGYAEIVKAGLIDGVELFAWCENHGAAVLSGDPAALAEAVRRACLFKAGVVQADEREQAAEGGRALLNLGHTFAHALEASFGYDGRLLHGEAVSIGLHLAVGLSVRLGFCDASVLLRLDSHLRTRAMPAGLDWFADALSAEELLNHMARDKKMRDGRLSFVLLRDIGDCFTTRDVPMEIVRDFLIREGCRS

Annotated regions:
phrase: RDGERRVIKRLLQGPPCVLATGGGA
type: CONSERVED_SITE
name: Shikimate_kinase_CS
description: Shikimate kinase, conserved site

phrase: GYAEIVKAGLIDGVELFAWCENHGAAVLSGDPAALAEAVRRACLFKAGVVQADEREQAAEGGRALLNLGHTFAHALEASFGYDGRLLHGEAVSIGLHLAVGLSVRLGFCDASVLLRLDSHLRTRAMPAGLDWFADALSAEELLNHMARDKK
type: DOMAIN
name: DHQS_C
description: 3-dehydroquinate synthase, C-terminal domain

phrase: FVVPGGEESKSLAQYGALIDDIITAGIERRTTVIGLGGGVVGDLAGFVAATVLRGVPFVQIPTTLLAQVDSSVGGKTGINARSGKNLIGAFHQPLAVLADSSALATLSRR
type: DOMAIN
name: DHQS/DOIS_N
description: 3-dehydroquinate synthase, N-terminal domain
Protein sequence:
MNRKTVFRNLAIVAGILLVIYLVSYFSNDTRGWKNVDTSVALSQLQDKPNVKQVQIDDKEQQLRITLNKGTDATGGSSQIIAKYPGGSEVAATVLKNVQDSGAPYNTTVKQDSWFTQVLLFVLPMVILLGLFVFVMARMQGGGRGGMMGFGKSRAKQLTKDMPKTTFGDVAGADEAVEELYEIKDFLQNPARYQALGAKIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFDQAKQNSPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRTGVIIIAATNRPDILDPALLRPGRFDRQIPVSNPDLAGRRAILRVHSQGKPIATDADLDGLAKRTVGMSGADLANVINEAALLTAREHGNVITGASLEESVDRVIGGPRRKSRIISEHEKKITAYHEGGHTLAAWAMPDIEPVYKVTILARGRTGGHAMTVPEDDKGLMTRSEMIARLVMAMGGRAAEELVFHEPTTGASSDIDQATKIARAMVTEYGMSARLGAVRYGQEQGDPFLGRSMGTGSDYSHEVAREIDEEVRNLIEAAHTEAWAILNEYRDELDSLATALLERETLHRKELEGVLSTVEKRARITAFNDFGERTPSDRPPVKTPRELAAERGEPWPPEGQTPVPATAPVPVGHGDGGRQPAFGYPVPAPQTQQPYPAPGATQTYPRPGGTHGSRPDYGAPAGWSAPGWPPAEEAEGGQSGNAGGPPPGYGGQGYPGGQPSAGWAPAGGARYGRGWS

Annotated regions:
phrase: RIISEHEKKITAYHEGGHTLAAWAMPDIEPVYKVTILARGRTGGHAMTVPEDDKGLMTRSEMIARLVMAMGGRAAEELVFHEPTTGASSDIDQATKIARAMVTEYGMSARLGAVRYGQEQGDPFLGRSMGTGSDYSHEVAREIDEEVRNLIEAAHTEAWAILNEYRDELDSLATALLERETLHRKEL
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: VLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFDQAKQNSPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRTGVIIIAATNRPDILDPALLRPGRFDRQIP
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: VIIIAATNRPDILDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: DADLDGLAKRTVGMSGADLANVINEAALLTAREHGNVITGASL
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: IPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFDQAKQNSPCIIFVDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGDRTGVIIIAATNRPDILDPALLRPGRFDRQIPVSNP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain