nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTDIDVLPVNFALLQLVGAQVPDHQTVKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVASLNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQWSSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANIDPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHEAPQPQPNSKYKTSMCRDLRQQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLNKVGVNSTVTTTAANVIPVIGSTETSGKIVPSTNGISSTESGVSQLIPRGTDTTLRALENVKKVGKVGANGQGVSGSPTESVPENKIGSPPKTPVSNVAATSAGPPSVGTEMSSVPPKSSPFITRLPVYPQHSENIHYFQDPRTQISFEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYSTFPPRDRVNSSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPPMYQRDDIIRSNSLPPMDVLHSSVYQTSLRERYNSLDGYYSVACQPPSEPRTAVPLPRESCSHLK

Annotated regions:
phrase: NLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIGHVVQLLYRASCFKVTKRDEDSSLM
type: DOMAIN
name: Roquin_1_2-like_ROQ
description: Roquin 1/2-like, ROQ domain

phrase: YKTSMCRDLRQQGGCPRGTNCTFAHS
type: DOMAIN
name: Znf_CCCH
description: Zinc finger, CCCH-type

phrase: CSHTVCKTC
type: CONSERVED_SITE
name: Znf_RING_CS
description: Zinc finger, RING-type, conserved site

phrase: CPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPF
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: CPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFD
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: EEFRSYEALRREHDAQIVHIAMEAGLRISPEQWSSLLYGDLAHKSHMQSIIDKLQ
type: DOMAIN
name: ROQ_II
description: Roquin II

phrase: KYKTSMCRDLRQQGGCPRGTNCTFAHS
type: DOMAIN
name: Znf_CCCH
description: Zinc finger, CCCH-type

phrase: KYKTSMCRDLRQQGGCPRGTNCTFAHSQ
type: DOMAIN
name: Znf_CCCH
description: Zinc finger, CCCH-type

phrase: CPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFD
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type
Protein sequence:
MIGLVGRKVGMTRIFNEDGVSIPVTVIEIEANRVTQVKTVETDGYSAIQVTTGSKKASRVTKPEAGHFVKAGVEAGRGLWEFRTTEGEEFTLGQEINVDIFADVKKVDVTGTSKGKGFAGGVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGNERVTVQSLEVVRVDAERKLLLVKGAVPGATNGDVIVKPAVKA

Annotated regions:
phrase: FADVKKVDVTGTSKGKGFAGGVK
type: CONSERVED_SITE
name: Ribosomal_uL3_CS
description: Large ribosomal subunit protein uL3, conserved site
Protein sequence:
MAESQRASQELGINVGQTQLQPGQSARRGVRDSEVNYSGPSVGSQILDGILGAGQQIAGKWFEHNVQQEVLRGERARMAGEAEEAVDSNVLAKPFVKGGWRKQDYRIAQADFSLKMQRFIANKGREMTPEEFRKYLSQEATHVLDSTEGMNPNDALQALAQQQKAEEQLFGMQAKAYMDWSIDQAARGFRTQGNSILAKAVQAQATGDELSRQLSLEEAGLFYTNIMTSEDIPLEVRDKVGMQFLAASLDMNQRGIYEGLRDAGFLDSMSFDDRRALNGLYEKSKAQTRAKESMATLRADADFQQRVANGAITDLAEVEAYSRGMVEEGRWSDAQAISFMTKAMTGLGNAQRMQGIMAALEAGDINALHTLGTNVTEALEQWDKMQAANGSSLTDRLVQGTQLGLRLGTFPKTYGESVGSAVRMIQAAKEGEANPELVNTLNSIFEQVASAQEINPSAGNVMLSGIPEAEQGAVAWALKQMKMGIAPAQALREFSANAEVVKQMDEFEKGQNTKAFKDNLGKQVNDKFVNNIFGRAWNMLTGESDLSNNEAVLSMYRRATIDEANWLASDRKHAGLLTSDTGREALLEIAAANVRNRTIQVGEGRNLKEGDLFSRRDSAPLILPRGTTAEQLFGTNDTETIGTVLAEQHKPHVEGLLGYKSVVAFEYDRTSGSLLAVEYDENGVALDRTRVDPQAVGKEVLKRNADKLNAMRGAEYGANVKVSGTDIRMNGGNSAGMLKQDVFNWRKELAQFEAYRGEAYKDADGYSV

Annotated regions:
Protein sequence:
MRECISVHIGQAGIQIGNACWELYCLEHGIQPNGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQISTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICKRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQAPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDTKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEGDDEDEGEDY

Annotated regions:
phrase: ECISVHIGQAGIQIGNACWELYCLEHGIQPNGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQISTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDIC
type: DOMAIN
name: Tubulin_FtsZ_GTPase
description: Tubulin/FtsZ, GTPase domain

phrase: FNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQISTSVVEPYNSVLSTHSLLEHTDVSVLLDNEAIYDICKRSLDIERPTYTNLNRLVSQVISSLTASLRFD
type: DOMAIN
name: Tubulin_FtsZ_GTPase
description: Tubulin/FtsZ, GTPase domain

phrase: LNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQAPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRID
type: DOMAIN
name: Tubulin/FtsZ_2-layer-sand-dom
description: Tubulin/FtsZ, 2-layer sandwich domain

phrase: PRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVGTIKTKRTIQFVDWCPTGFKCGINYQAPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRI
type: DOMAIN
name: Tubulin/FtsZ_2-layer-sand-dom
description: Tubulin/FtsZ, 2-layer sandwich domain

phrase: GGGTGS
type: CONSERVED_SITE
name: Tubulin_CS
description: Tubulin, conserved site
Protein sequence:
MVKGKKPYIDRKKAVTFHLVHRSQHDPLVTDENAPQRVLLEAAARQQKPKDPEPPTDPAQRQEELKKFGIHFDDDYDYMQHLKKRENDVVWEFMENPNQARKQKVQDSEKPGPAPKLMLPSSVFASEFEESEGMLNKAAPQTLRLDWDPDVVAALDSDCENEELEDDFVIQAMAEGDSDDEEWDDEDGEEQSDMDFDSDDLNEDENEDELMDRLAPLMRERRFDDEEVKSRFTEYSMSSSVIRRNEQLSLLDDRFEKFYATYDDPELGDLALEDIEGNWHQKHPVVMQCFQEFKKKDKGIEYNKEWDRERIEKYRNVVEGEEDPTEELVEYEVDDPKQKKWDCESILSTYSNIYNHPKVIDEPRRSRRSSASTNPAPIQIDPKTGLPTNVLRGGVDGQLTAKALANLADESPAATGPKSLCAKSVLSTLSVLSIRPKDETHEEKKERKRLLKDYRNERRIEKKANTEAFKEEKKRQTHVKINQRTNQQGASIV

Annotated regions:
Protein sequence:
APGTLTELAGESKLNSKFVRDEDERPKVAYNEFSDEIPVISLAGIDDVDGKRGEICREIVEACENWGIFQVVDHGVDTSLVADMTRLARDFFALPPEEKLRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPVRNRDYSRWPDKPQGWAKVTEEYSEKLMGLACKLLEVLSEAMGLEKESLTNACVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDDGNTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATFQNPAPEATVYPLKVREGEKAIMEEPITFAEMYKRKMGRDLELARLKKLAKEEHNHKEAAKPLDQILA

Annotated regions:
phrase: IPVISLAGIDDVDGKRGEICREIVEACENWGIFQVVDHGVDTSLVADMTRLARDFFALPPEEKLRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPVRNRDYSRWP
type: DOMAIN
name: DIOX_N
description: Non-haem dioxygenase N-terminal domain

phrase: CVDMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDDGNTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATFQN
type: DOMAIN
name: Oxoglu/Fe-dep_dioxygenase_dom
description: Oxoglutarate/iron-dependent dioxygenase domain

phrase: DQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQDQVGGLQATRDDGNTWITVQPVEGAFVVNLGDHGHFLSNGRFKNADHQAVVNSNSSRLSIATFQN
type: DOMAIN
name: IPNS-like_FE2OG_OXY
description: Isopenicillin N synthase-like, Fe(2+) 2OG dioxygenase domain
Protein sequence:
MVDAFLGTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTFKNTEISFKLGVEFDETTADDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELIDGKLILTLTHGTAVCTRTYEKEA

Annotated regions:
phrase: GTWKLVDSKNFDDYMKSLGVGFATRQVASMTKPTTIIEKNGDILTLKTHSTFKNTEISFKLGVEFDETTADDRKVKSIVTLDGGKLVHLQKWDGQETTLVRELIDGKLILTLTHGTAVCTRTYEK
type: DOMAIN
name: Lipocln_cytosolic_FA-bd_dom
description: Lipocalin/cytosolic fatty-acid binding domain

phrase: FLGTWKLVDSKNFDDYMKSLGV
type: DOMAIN
name: Fatty_acid-bd
description: Cytosolic fatty-acid binding

phrase: SFKLGVEFDETTADDR
type: DOMAIN
name: Fatty_acid-bd
description: Cytosolic fatty-acid binding

phrase: DGKLILTLTHGTAVCTRTYE
type: DOMAIN
name: Fatty_acid-bd
description: Cytosolic fatty-acid binding

phrase: GTWKLVDSKNFDDYMKS
type: DOMAIN
name: Fatty_acid-bd
description: Cytosolic fatty-acid binding
Protein sequence:
MLLVHIISFLLFFQLSAAKAPPSKTSLINTHERRSIYSCYVGLRKETWGFNGSAICRYEPAIQSMLYCLYEDTHEKGYSNKTLEKGFEEMRQFCYTPKFLNMTDAEFYTSLDNGTYYIQDQPKAGINITYPIRLNTTLRKAYYDAYYGYYYNHDIPYYFGGIICAYFVGVMLLAGLIRFLNYTPIKKIMFQQKLVNYVRGYTTLPTLYEKHAEPFSYLKVITGYLPTRFETLVILGYLILHTIFMAYKYQYDPYHIIFAAHRAEVAHFVAYRSGILSFAHLPLIVLFAGRNNFLQLISGLKHTSFIVFHKWLGRMMFLDAIIHAAGFTNYYLYYKKWNTVRLRVYWKFGIATTCLAGMLIFFSIAAFRRHYYETFMALHIVFAALFLYTCWEHVTNFSGIEWIYAAIAIWGVDRIVRITRIALLGFPKADLQLVGSDLVRVTVKKPKKFWKAKPGQYVFVSFLRPLCFWQSHPFTVMDSCVNDRELVIVLKAKKGVTKLVRNFVERKGGKASMRLAIEGPYGSKSTAHRFDNVLLLAGGSGLPGPISHALELGKTTAASGKNFVQLVIAVRGLDMLNACKKELMALKGLNVQVHIYNSKQELASAEKISSNEVKNGETTAEKAPSSLSNSEKAPSESENTELPLSLNDTSISDLEFATFHVGRPNVEEILNESVNHSGSLAVVCCGPPIFVDTARNQTAKAVIRNPSRMIEYLEEYQAW

Annotated regions:
phrase: LGFPKADLQLVGSDLVRVTVKKPKKFWKAKPGQYVFVSFLRPLCFWQSHPFTVMDSCVNDRELVIVLKAKKGVTKLVRNFVERKGGKASMRLAIEGPYGS
type: DOMAIN
name: FAD-bd_8
description: FAD-binding 8

phrase: SGILSFAHLPLIVLFAGRNNFLQLISGLKHTSFIVFHKWLGRMMFLDAIIHAAGFTNYYLYYKKWNTVRLRVYWKFGIATTCLAGMLIFFSIAAFRRHYYETFMALHIVFAALFLYT
type: DOMAIN
name: Fe3_Rdtase_TM_dom
description: Ferric reductase transmembrane component-like domain

phrase: FDNVLLLAGGSGLPGPISHALELGKTTAASGKNFVQLVIAVRGLDMLNACKKELMALKGLNVQVHIYNSKQELASAEKISSNEVKNGETTAEKAPSSLSNSEKAPSESENTELPLSLNDTSISDLEFATFHVGRPNVEEILNESVNHSGSLAVVCCGPPIFVDTARNQ
type: DOMAIN
name: Fe_red_NAD-bd_6
description: Ferric reductase, NAD binding domain

phrase: AIWGVDRIVRITRIALLGFPKADLQLVGSDLVRVTVKKPKKFWKAKPGQYVFVSFLRPLCFWQSHPFTVMDSCVNDRELVIVLKAKKGVTKLVRNFVERKGGKASMRLAIEGPYGSKST
type: DOMAIN
name: FAD-bd_FR_type
description: FAD-binding domain, ferredoxin reductase-type
Protein sequence:
MYTDLEDNENRFYTNSDVILEEGTLGSSLGRSSRRTHEKGEDVQDPVFFNVHEVTESYFADITNPTVFRDHDEDHSLCVTHFMNVYASQDSRLFEETRVVRIPRRFDMGNRWYPMFSDLLPGSEPGAILHDTDGLQFVPRGITQDGNVYGYSSVSPLSLYLTQQHFQEIVTTINDILLATYSTYGFYNILNIILEVFTLGLWSYVCKRINYALSIDPMKRLDVYVRELNASPAFVEAQIKLINPRDSGFLSLDFQIPKPKSISTQ

Annotated regions:
phrase: VVRIPRRFDMGNRWYPMFSDLLPGSEPGAILHDTDGLQFVPRGITQDGNVYGYSSVSPLSLYLTQQHFQEIVTTINDILLATYSTYGFYNILNIILEVFTLGLWSYVCKRINYALSIDPMKRLDVYVRELNASPAFVEAQIKLINPRDSGFLSL
type: DOMAIN
name: Golgin_A_7/ERF4
description: Golgin subfamily A member 7/ERF4
Protein sequence:
MHIDIMTLFPEMFHGVLESSIIGRALAREMITVNLIDIREFSTNKHRKVDDYPYGGGAGMVMKPEPIFYAMDELKKSPSFNVNQKTVFVTPQGNPYSQEKAKELSSLNRLTILCGHYEGVDERVRQHLVDEEISVGDYVLTGGELPAMVILDSVTRLVPGVLGDESSAKTDSFNNYLLEHPQYTRPAIFRGLEVPEILMSGDHKRIATWKTKESLKRTLSRRPDLLDKKSLTEEEYKLMREILKESPNKELDLDRL

Annotated regions:
phrase: GRALAREMITVNLIDIREFSTNKHRKVDDYPYGGGAGMVMKPEPIFYAMDELKKSPSFNVNQKTVFVTPQGNPYSQEKAKELSSLNRLTILCGHYEGVDERVRQHLVDEEISVGDYVLTGGELPAMVILDSVTRLVPGVLGDESSAKTDSFNNYLLEHPQYTRPAIFRGLEVPEILMSGDHKRIATWKTKESLKRTLSRR
type: DOMAIN
name: tRNA_MeTrfase_TRMD/TRM10
description: tRNA methyltransferase TRMD/TRM10-type domain
Protein sequence:
MKQPTLIRPRLRHRRSTPAAATKMCPKRHWLVNNRAAGSRGSGGAAARSRRSLDQIVEVLVALIVVNCLATAAAALITPPDSLESLGSLGIPSSSASSSEDDDDMSSGFYRIPHRLEGYPQLQQLQRGQNFKISPKPCSFGRVEGTCMFVWECIKSEGKHVGMCVDSFMFGSCCTHNYTDNIVLPQTAFSYTRPTKPLTLRPRPPAAPYKPMISGMTTIERPHGAGTLVIRPSGPHHQGTLARPHPPPYQSKPTTASDLHGSASHPSSSSSSSSSSNPNSIWHTSTQQQQQQQHQQNQQNHWQMTTEPSFITKPRPTGWTKPGIVNLPMPARPSKPSKPTKKPIVYDRTPPPPPSVPPSTSTSTTSTSLIWPAQTHPPQPHRPTRPQLSPGTSLAASSSSHWPSSTTSTTSSTTSTTTTTTTTRRTTTPTTTTRRTTTNKPTRPYQRPTTATSSSSTSTTSSKTPTTTRPISSSSSSSSGIVTSSQRPTQPTHRTPVLATSGIETNEISDSSIPDAGALGHVKTISAARSECGVPTLARPETRIVGGKSAAFGRWPWQVSVRRTSFFGFSSTHRCGGALINENWIATAGHCVDDLLISQIRIRVGEYDFSHVQEQLPYIERGVAKKVVHPKYSFLTYEYDLALVKLEQPLEFAPHVSPICLPETDSLLIGMNATVTGWGRLSEGGTLPSVLQEVSVPIVSNDNCKSMFMRAGRQEFIPDIFLCAGYETGGQDSCQGDSGGPLQAKSQDGRFFLAGIISWGIGCAEANL

Annotated regions:
phrase: IVGGKSAAFGRWPWQVSVRRTSFFGFSSTHRCGGALINENWIATAGHCVDDLLISQIRIRVGEYDFSHVQEQLPYIERGVAKKVVHPKYSFLTYEYDLALVKLEQPLEFAPHVSPICLPETDSLLIGMNATVTGWGRLSEGGTLPSVLQEVSVPIVSNDNCKSMFMRAGRQEFIPDIFLCAGYETGGQDSCQGDSGGPLQAKSQDGRFFLAGIISWGIGCAEA
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain

phrase: IVGGKSAAFGRWPWQVSVRRTSFFGFSSTHRCGGALINENWIATAGHCVDDLLISQIRIRVGEYDFSHVQEQLPYIERGVAKKVVHPKYSFLTYEYDLALVKLEQPLEFAPHVSPICLPETDSLLIGMNATVTGWGRLSEGGTLPSVLQEVSVPIVSNDNCKSMFMRAGRQEFIPDIFLCAGYETGGQDSCQGDSGGPLQAKSQDGRFFLAGIISWGIGCAEAN
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain

phrase: DSCQGDSGGPL
type: ACTIVE_SITE
name: TRYPSIN_SER
description: Serine proteases, trypsin family, serine active site

phrase: IVGGKSAAFGRWPWQVSVRRTSFFGFSSTHRCGGALINENWIATAGHCVDDLLISQIRIRVGEYDFSHVQEQLPYIERGVAKKVVHPKYSFLTYEYDLALVKLEQPLEFAPHVSPICLPETDSLLIGMNATVTGWGRLSEGGTLPSVLQEVSVPIVSNDNCKSMFMRAGRQEFIPDIFLCAGYETGGQDSCQGDSGGPLQAKSQDGRFFLAGIISWGIGCAEA
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain

phrase: RIVGGKSAAFGRWPWQVSVRRTSFFGFSSTHRCGGALINENWIATAGHCVDDLLISQIRIRVGEYDFSHVQEQLPYIERGVAKKVVHPKYSFLTYEYDLALVKLEQPLEFAPHVSPICLPETDSLLIGMNATVTGWGRLSEGGTLPSVLQEVSVPIVSNDNCKSMFMRAGRQEFIPDIFLCAGYETGGQDSCQGDSGGPLQAKSQDGRFFLAGIISWGIGCAE
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain
Protein sequence:
MEKKNCNPKETSSQKASDKNHLTLKNSLLKDIDFYLVTDSGLSKKGTLSDVKESVEAGCKIVQYREKCKSTGEMIDEAAEIKKICSGRAIFLINDRIDVALVVDADGVHIGQDDMPIETARKILGANKIIGLTVHNADEAIEAEKSGADYVGLGSIFDTFTKKDAGKGIGPASIREVRNAIKISVVAIGGINKENCRSVIENGADSLVAISAVVCSDDVKKETREFIDIIREIKGTGSSK

Annotated regions:
phrase: FYLVTDSGLSKKGTLSDVKESVEAGCKIVQYREKCKSTGEMIDEAAEIKKICSGRAIFLINDRIDVALVVDADGVHIGQDDMPIETARKILGANKIIGLTVHNADEAIEAEKSGADYVGLGSIFDTFTKKDAGKGIGPASIREVRNAIKISVVAIGGINKENCRSVIENGADSLVAISAVVCSDDVKKETREFI
type: DOMAIN
name: ThiamineP_synth_TenI
description: Thiamine phosphate synthase/TenI

phrase: FYLVTDSGLSKKGTLSDVKESVEAGCKIVQYREKCKSTGEMIDEAAEIKKICSGRAIFLINDRIDVALVVDADGVHIGQDDMPIETARKILGANKIIGLTVHNADEAIEAEKSGADYVGLGSIFDTFTKKDAGKGIGPASIREVRNAIKISVVAIGGINKENCRSVIENGADSLVAISA
type: DOMAIN
name: ThiamineP_synth_TenI
description: Thiamine phosphate synthase/TenI
Protein sequence:
MLLMNLFTIINNDVPTPYNMYFQDSTTPHQEGILELHDNIMFYMLTVLGLVSWMMIIIIKDYKNNPITYKYIKHGQMIEIIWTILPAIILLMIAFPSFILLYLCDEVISPAMTIKVIGLQWYWKYEYSDFINDNGETIEYESYMIPEELLEEGQLRMLDTDTSIVIPVDTHVRFIVTATDVIHDFAVPSLGIKIDTTPGRLSQVSTLIQREGIFYGQCSELCGAQHSAMPIKIETVKLPTFLTWLNEQ

Annotated regions:
phrase: PTPYNMYFQDSTTPHQEGILELHDNIMFYMLTVLGLVSWMMIIIIKDYKNNPITYKYIKHGQMIEIIWTILPAIILLMIAFPSF
type: DOMAIN
name: Cyt_c_oxidase_su2_TM_dom
description: Cytochrome C oxidase subunit II, transmembrane domain

phrase: SPAMTIKVIGLQWYWKYEYSDFINDNGETIEYESYMIPEELLEEGQLRMLDTDTSIVIPVDTHVRFIVTATDVIHDFAVPSLGIKIDTTPGRLSQVSTLIQREGIFYGQCSELCGAQHSAMPIKIETVKLPTFLTWLN
type: DOMAIN
name: CcO_II-like_C
description: Cytochrome c oxidase subunit II-like C-terminal

phrase: VIHDFAVPSLGIKIDTTPGRLSQVSTLIQREGIFYGQCSELCGAQHSA
type: BINDING_SITE
name: Copper_CuA
description: Copper centre Cu(A)

phrase: QEGILELHDNIMFYMLTVLGLVSWMMIIIIKDYKNNPITYKYIKHGQMIEIIWTILPAIILLMIAFPSFILLYLCDEVISPAMTIKVIGLQWYWKYEYSDFINDNGETIEYESYMIPEELLEEGQLRMLDTDTSIVIPVDTHVRFIVTATDVIHDFAVPSLGIKIDTTPGRLSQVSTLIQREGIFYGQCSELCGAQHSAMPIKIETVKLPTFLTWL
type: DOMAIN
name: Cyt_c_oxidase_su2
description: Cytochrome c oxidase, subunit II

phrase: MTIKVIGLQWYWKYEYSDFINDNGETIEYESYMIPEELLEEGQLRMLDTDTSIVIPVDTHVRFIVTATDVIHDFAVPSLGIKIDTTPGRLSQVSTLIQREGIFYGQCSELCGAQHSAMPIKIET
type: DOMAIN
name: CcO_II-like_C
description: Cytochrome c oxidase subunit II-like C-terminal

phrase: VPTPYNMYFQDSTTPHQEGILELHDNIMFYMLTVLGLVSWMMIIIIKDYKNNPITYKYIKHGQMIEIIWTILPAIILLMIAFPSFILLYLCDEV
type: DOMAIN
name: Cyt_c_oxidase_su2_TM_dom
description: Cytochrome C oxidase subunit II, transmembrane domain

phrase: PAMTIKVIGLQWYWKYEYSDFINDNGETIEYESYMIPEELLEEGQLRMLDTDTSIVIPVDTHVRFIVTATDVIHDFAVPSLGIKIDTTPGRLSQVSTLIQREGIFYGQCSELCGAQHSAMPIKIETVKLPTFLT
type: DOMAIN
name: CcO_II_C
description: Cytochrome c oxidase subunit 2, C-terminal
Protein sequence:
MDKKVTEVVEAFAQPIVEELNLELVDVEYVKEGQDWFLRVFIDSEKGVDIEECGAVSERLSEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFEGKLLSYDGTTITLLLTIKTRKKEIQIPMDKVANARLAVTF

Annotated regions:
phrase: AQPIVEELNLELVDVEYVKEGQDWFLRVFIDSEKGVDIEECGAVSERLSEALDKEDPIPHLYFLDVSSPGA
type: DOMAIN
name: RimP_N
description: Ribosome maturation factor RimP, N-terminal

phrase: LKKEKDFQQAVGKQVAIKTYEPIDGEKMFEGKLLSYDGTTITLLLTIKTRKKEIQIPMDKVANARLAVT
type: DOMAIN
name: RimP_C
description: Ribosome maturation factor RimP, C-terminal

phrase: GAERPLKKEKDFQQAVGKQVAIKTYEPIDGEKMFEGKLLSYDGTTITLLLTIKTRKKEIQIPMDKVANARLAVT
type: DOMAIN
name: RimP_C
description: Ribosome maturation factor RimP, C-terminal
Protein sequence:
MATHGQTCPRPMCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNTDTGKVTGTLETKYKWCEYGLTFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGKKSGKIKSSYKRECVNLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFAVGYRTGDFQLHTNVNDGTEFGGSIYQKVCEDLDTSVNLAWTSGTNCTRFGIAAKYQLDPTASISAKVNNSSLIGVGYTQTLRPGVKLTLSALVDGKSINAGGHKLGLALELEA

Annotated regions:
Protein sequence:
MPIITLPDGNKKKFDQPVTIMEVAESLGPGLAKAAIAGRVNGVLLDTCIPIEKDSEVNIITAKDQDGIETIRHSFAHLIGHAVKQLYPEAKMAIGPVIEDGFYYDIAYDQPFTPKDLEAIEARMKELVKLDYDVNVEIVSREEAHKEFEKRCEPYKIEIVDEIPENEIIKLYRHQEYTDMCRGPHVPNTRHLRTFKLMKVSGAYWRGDSNKTMLQRIYGTAWGSSKELKAYLKRLEEAEKRDHRRIAKQMSLFHTQEEAPGMIFWHAKGWAIYQVLEQYIRETLSLHAYQEIRTPQVVDRSLWEKSGHWEKFKDDMFTTTSENREYAIKPMNCPCHVQIFNQGLKSYRDLPIRLAEFGSCLRNEPSGSLHGLMRVRNFVQDDAHIFCTELQVQEEVSKFIDLVFEIYRSFGFDSVLIKLSTRPEKRVGSDEIWDKSEKALSDALDAKGLAWDLLPGEGAFYGPKIEFSLKDCLGRVWQCGTIQVDFSMPERLGASYVAEDSQRRTPVMLHRAILGSFERFIGILIEHYAGRMPVWLAPVQVAVMGITDRNAQTCQDVCKKLSALEYRTEVDLRNEKIGFKVREHTLQRVPFLIIIGDKEQQSGEVAVRTREGKDFGSMPLNSFISLLDEAIALKGRSGVS

Annotated regions:
phrase: MPIITLPDGNKKKFDQPVTIMEVAESLGPGLAKAAIAGRVNGVLLDTCIPIEKDSEVNII
type: DOMAIN
name: TGS
description: TGS

phrase: FTTTSENREYAIKPMNCPCHVQIFNQGLKSYRDLPIRLAEFGSCLRNEPSGSLHGLMRVRNFVQDDAHIFCTELQVQEEVSKFIDLVFEIYRSFGFDSVLIKLSTRPEKRVGSDEIWDKSEKALSDALDAKGLAWDLLPGEGAFYGPKIEFSLKDCLGRVWQCGTIQVDFSMPERLGASYVAEDSQRRTPVMLHRAILGSFERFIGILIEH
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: ITLPDGNKKKFDQPVTIMEVAESLGPGLAKAAIAGRVNGVLLDTCIPIEKDSEVNII
type: DOMAIN
name: TGS
description: TGS

phrase: IKLYRHQEYTDMCRGPHVPNTRHLRTFKLMKVSGAYWRGDSNKTMLQRI
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD

phrase: DHRRIAKQMSLFHTQEEAPGMIFWHAKGWAIYQVLEQYIRETLSLHAYQEIRTPQVVDRSLWEKSGHWEKFKDDMFTTTSENREYAIKPMNCPCHVQIFNQGLKSYRDLPIRLAEFGSCLRNEPSGSLHGLMRVRNFVQDDAHIFCTELQVQEEVSKFIDLVFEIYRSFGFDSVLIKLSTRPEKRVGSDEIWDKSEKALSDALDAKGLAWDLLPGEGAFYGPKIEFSLKDCLGRVWQCGTIQVDFSMPERLGASYVAEDSQRRTPVMLHRAILGSFERFIGILIEHYAGRM
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: PVQVAVMGITDRNAQTCQDVCKKLSALEYRTEVDLRNEKIGFKVREHTLQRVPFLIIIGDKEQQSGEVAVRTREGKDFGSMPLNSFISL
type: DOMAIN
name: ThrRS_anticodon
description: Threonine-tRNA ligase, class IIa, anticodon-binding domain

phrase: QVAVMGITDRNAQTCQDVCKKLSALEYRTEVDLRNEKIGFKVREHTLQRVPFLIIIGDKEQQSGEVAVRTREGKDFGSMPLNSFISLL
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: IKLYRHQEYTDMCRGPHVPNTRHLRTFKLMKVSGAYWRGDSNKTMLQRI
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD

phrase: RDHRRIAKQMSLFHTQEEAPGMIFWHAKGWAIYQVLEQYIRETLSLHAYQEIRTPQVVDRSLWEKSGHWEKFKDDMFTTTSENREYAIKPMNCPCHVQIFNQGLKSYRDLPIRLAEFGSCLRNEPSGSLHGLMRVRNFVQDDAHIFCTELQVQEEVSKFIDLVFEIYRSFGFDSVLIKLSTRPEKRVGSDEIWDKSEKALSDALDAKGLAWDLLPGEGAFYGPKIEFSLKDCLGRVWQCGTIQVDFSMPERLGASYVAEDSQRRTPVMLHRAILGSFERFIGILIEHYAGRMPVWLA
type: DOMAIN
name: ThrRS_core
description: Threonine-tRNA ligase catalytic core domain
Protein sequence:
MQKHILLAITGGIAAYKSCELVRLLKKQGHHITVAMSQAATEFVAPQTFQALSGNPVLTEQGGAGNGMAHINATRAADIMLIAPATANTLAKIAHGIADNLITEMVAARNCPLVVAPAMNVEMWHNPANLRNIKQLAQDGVHVLQPAAGEQACGETGVGRMQEPSDIAELLPDFWLDKPLLGKKVVLTVGASYEAIDPVRGITNISSGQMGVALARACRQAGAQVDVIYANLQVPLPKGMAYTEQAQSAQAMYDAVFRRLDLGADVFIGVAAVADYRVKNRATQKLKKDGSGSPPVIELTENPDILQAVAQRENAPFCVGFAAESENVLAYARAKRAKKGVPLLVANDVSVAMGQSSNQIIMLDDEQETALPEMSKDAAAQAIVSRLATLLARSSD

Annotated regions:
phrase: KHILLAITGGIAAYKSCELVRLLKKQGHHITVAMSQAATEFVAPQTFQALSGNPVLTEQGGAGNGMAHINATRAADIMLIAPATANTLAKIAHGIADNLITEMVAARNCPLVVAPAMNVEMWHNPANLRNIKQLAQDGVHVLQPAAGEQACGETGVGRMQEPSDIA
type: DOMAIN
name: Flavoprotein
description: Flavoprotein

phrase: LGKKVVLTVGASYEAIDPVRGITNISSGQMGVALARACRQAGAQVDVIYANLQVPLPKGMAYTEQAQSAQAMYDAVFRRLDLGADVFIGVAAVADYRVKNRATQKLKKDGSGSPPVIELTENPDILQAVAQRENAPFCVGFAAESENVLAYARAKRAKKGVPLLVANDVSVAMGQSSNQII
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal
Protein sequence:
MLRQYKEQIKSSPQSCGVYKMIGDKSKVLYIGKAKNLKSRLSDYLQFENLSERIRVMISQVIKVEIFITENEIEALLLEAQLIKSLKPSYNILLRDGKSYPYITISKHDYPRIAKYRGKFKKNEFHYYGPFPSAAAVKNTILSLQKAFLLRVCSDQYFSSTKRPCLEYQVKRCSAPCVDKITKDDYCKSVKQAQDTLLGRNKEVQRQLFSTMEKCSREMNYELAAVYRDRLKFLQQIQMQPMDFSFEEDADFFSVVREADLACIGVLSFRDKGNYGSIPYFIENCSDHSNDEILSTFLVNLYNPVNTPPAQIYVPDFIKDKEIIEQALYALTQKSIKVLHAKNSKERDLLNFIYNNSQHSLEQKLTDYRNNLEKLEELRKIFSLPNIPKRIEVYDNSHISGNQQVGVMIVAGQEGFLKSEYKKFTIKEEISGDDYKMMREVLTRRFSGNIKDIIPDFLLIDGGPGHVSIVQNVLEILNIKVPFACMAKGHDRNAGNERFYVPDREEFTLASDSKVMLYLQLLRNEAHRFAITSHRKKRDKQFFASQLSEISGVGSKRKKALMSHFGSVENISKASLAEIQNVPGISKGLAEIILQHVNSKKGTPK

Annotated regions:
phrase: PQSCGVYKMIGDKSKVLYIGKAKNLKSRLSDYLQFENLSERIRVMISQVIKVEIFITENEIEALLLEAQLIKSLKPSYN
type: DOMAIN
name: GIY-YIG_UvrC_Cho
description: UvrC/Cho-like, GIY-YIG domain

phrase: KIFSLPNIPKRIEVYDNSHISGNQQVGVMIVAGQEGFLKSEYKKFTIKEEISGDDYKMMREVLTRRFSGNIKDIIPDFLLIDGGPGHVSIVQNVLEILNIKVPFACMAKGHDRNAGNERFYVPDREEFTLASDSKVMLYLQLLRNEAHRFA
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: SCGVYKMIGDKSKVLYIGKAKNLKSRLSDYLQFENLSERIRVMISQVIKVEIFITENEIEALLLEAQLIKSLKPSYNILLR
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: CGVYKMIGDKSKVLYIGKAKNLKSRLSDYLQFENLSERIRVMISQVIKVEIFITENEIEALLLEAQLIKSLKPSY
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: QSCGVYKMIGDKSKVLYIGKAKNLKSRLSDYLQFENLSERIRVMISQVIKVEIFITENEIEALLLEAQLIKSLKPSYN
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: FFSVVREADLACIGVLSFRDKGNYGSIPYFIENCSDHSNDEILSTFLVNLYNPVNTPPAQIYVPDFIKDKEIIEQALYALTQKSIKVLHAKNSKERDLLNFIYNNSQHSLEQKLTDYRNNLEKLEELRKIFSLPNIPKRIEVYDNSHISGNQQVGVMIVAGQEGFLKSEYKKFTIKEEISGDDYKMMREVLTRRFSGNIKDIIPDFLLIDGGPGHVSIVQNV
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: KEVQRQLFSTMEKCSREMNYELAAVYRDRLKFLQQ
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: KEVQRQLFSTMEKCSREMNYELAAVYRDRLKFLQ
type: DOMAIN
name: UVR_dom
description: UVR domain
Protein sequence:
MEVVPIAYDSMGVRSMATFVKTADVSILIDPGVSLAPKRYRLPPHRIEIERMNQKWEEIKEMMKKAEVAIITHYHYDHHDPNEVEIFSGKKLLLKHPTEKINRSQKGRAAYFLEQLKSVDVEIDYCDGKSYEFGNTVVELSKPVFHGADSRLGFVVEVYVEDGKSSFLFSSDVEGPNNEEQLAFMLEKSAEVVFIDGPMTYMLGYRFSQKSFESSVENLKRLIAEDVKTLVLDHHLTRDLRWREKMQEVFKAGEEAGVKVESAAEFAGVKEELLEARRAELYKMDKN

Annotated regions:
Protein sequence:
MIKMNDITRDGNPVLRKRAEKLTFPLDPKYLKVADEMMEYLKNSQDPAIAEKYHLRAGVGLAAPQIGLSIQMASVLVPGPDNTIDLEETLVNPVIVSQSVQIAALEEGEGCLSVDKDVPGYVPRHDRITVRYQTLDGEEKTIKLRDYPAIVCQHEIDHLKGTLFYDHINKENPLDIEDNAILIG

Annotated regions:
Protein sequence:
MIIVLSPAKSLDYETPPHVSHHTQPQFADDAAALIDELRRLSPQQIGTLMSISDPLARLNFQRYADWSRASTPANAKQAVLAFNGDVYEGLDARSLSPDDLDYAQRHVRVLSGLYGLLRPLDLLQPYRLEMGTRFSNARGKDLYAFWGERITHALNAELKTRVGASRVLVNCASAEYFKSVKPKLLDARVVTPVFEDWKDGRYKIISFHAKRARGLMARYVVEGRIDSPDALKDFASEGYAFDASASNDDTYVFRRRAGA

Annotated regions:
Protein sequence:
MSTQDSAKITTVEHRRNIYLVGLMGAGKTTVGRQLARRLSRPFFDTDHEIVERTGVPIPTIFEIEGEEGFRRREAQTIYDLTAENNIVLATGGGVVINPENRRRLHDTGWVVYLNVSPVLLYERTRHDRNRPLLRVEDPLAKLEELHSIRDPLYREVAHIVVDGSHLVASGIVQYLLREFNRL

Annotated regions:
phrase: RRREAQTIYDLTAENNIVLATGGGV
type: CONSERVED_SITE
name: Shikimate_kinase_CS
description: Shikimate kinase, conserved site
Protein sequence:
MDENRSKALAAALSQIEKQFGKGSIMRMGDTDVAADIQAVSTGSLGLDIALGIGGLPRGRIVEIYGPESSGKTTLTLSVIAQMQKLGGTAAFIDAEHALDPVYAQKLGVNVSDLLISQPDTGEQALEIADMLVRSGSVDVVVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKLTANIKRTNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKKGDEVTGSETRVKVVKNKVAPPFKQAEFDILYGEGISREGEIIELGVNLKLIEKAGAWYSYKGEKIGQGKDNAREFLREHPEIANEIDAKIREHSNLANAAMTTAPDEESDE

Annotated regions:
phrase: RGRIVEIYGPESSGKTTLTLSVIAQMQKLGGTAAFIDAEHALDPVYAQKLGVNVSDLLISQPDTGEQALEIADMLVRSGSVDVVVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKLTANIKRTNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRT
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: KALAAALSQIEKQFGKGSIMRMGDTDVAADIQAVSTGSLGLDIALGIGGLPRGRIVEIYGPESSGKTTLTLSVIAQMQKLGGTAAFIDAEHALDPVYAQKLGVNVSDLLISQPDTGEQALEIADMLVRSGSVDVVVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKLTANIKRTNTLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKKGDEVTGSETRVKVVKNKVAPPFKQAEFDILYGEGI
type: DOMAIN
name: RecA-like_N
description: RecA-like, N-terminal

phrase: ALKFYASV
type: CONSERVED_SITE
name: DNA_recomb/repair_RecA_CS
description: DNA recombination/repair protein RecA, conserved site

phrase: GEIIELGVNLKLIEKAGAWYSYKGEKIGQGKDNAREFLREHPEIANEIDAKIRE
type: DOMAIN
name: RecA-like_C
description: RecA-like, C-terminal

phrase: GVMFGNPETTTGGNALKFYASVRLDIRRTGAIKKGDEVTGSETRVKVVKNKVAPPFKQAEFDILYGEGISREG
type: DOMAIN
name: RecA_monomer-monomer_interface
description: DNA recombination and repair protein RecA, monomer-monomer interface

phrase: DIQAVSTGSLGLDIALGIGGLPRGRIVEIYGPESSGKTTLTLSVIAQMQKLGGTAAFIDAEHALDPVYAQKLGVNVSDLLISQPDTGEQALEIADMLVRSGSVDVVVVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKLTANIKRTNTLVIFINQ
type: DOMAIN
name: RecA_ATP-bd
description: DNA recombination and repair protein RecA-like, ATP-binding domain