nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTELPTTVPGYNSAVAQTDSDAMRYRYTAELAGRIESTWQDNWARLQTFNVPNPVGSLAPPDGSVVPADKLFVQDMFPYPSGDGLHVGHPLGYIATDVYARYFRMTGHNVLHAMGFDAFGLPAEQYAMQTGTHPRILTEANVVNFRHQLGRLGLGHDSRRTFSTTDVEFYKWTQWIFLQIYNAWFDVAANKARPIAELIAEFDSGERRLVDGRDWATLSAGERADVIDNCRLVYRADSMVNWCPGLGTVLANEEVTADGRSDRGNFPVFRKRLRQWMMRITAYADRLLDDLDLLDWPEQVKTMQRNWIGRSSGATVLFSAILSRSDAATTEVDVEVFTTRPDTMFGVTYLVLAPEHNLVDELVATVWPDRTDPRWTYGAATPGAAVAAYRRAIVAKSDLDRQESKEKTGVFLGRYATNPATGKPVPIFVADYVLVGYGTGAVMAVPGHDPRDWDFAHKFHLPIVEVIAGSDISEAAYVGDGVLVNSGYLDGMDVATAQEAITARLESEGRGHARIEFKLRDWLFARQRYWGEPFPIIYDSDGRPHALDEAALPVELPDVPYYSPVLFDPDDADSEPSPPLAKATEWVHVELDLGDGLKPYSRDTNVMPQWAGSSWYELRYTDPHNSERLCAKENEAYWMGPRPTEHGIDDPGGVDLYVGGAEHAVLHLLYARFWHKVLYDLGHVSSREPYRRLINQGYIQAFAYTDAHGSYVPANQVFQRGDGFFCPGPDGEIEVFQEFGKIGKSLKNSVSPDEICDEYGADTLRVYEMSMGPLEASRPWATKDVVGAYRFLQRVWRLVVDERTGETRVVDTAGELDTYTLRTLHRTIAGVSQDYAALRNNTATAKLIEYTNHLTKEHRGSVPRVAVEPLVLMLAPLAPHLAEELWLRLGHTTSLANGPFPQADPAYLVDDTVEYPVQVNGKIRGRIVVAADADYDTLKTVALADDKVQQFLAGATPRKVIVVAGRLISLVI

Annotated regions:
phrase: DMFPYPSGDGLHVGHPLGYIATDVYARYFRMTGHNVLHAMGFDAFGLPAEQYAMQTGTHPRILTEANVVNFRHQLGRLGLGHDSRRTFSTTDVEFYKWTQWIFLQIYN
type: DOMAIN
name: Methionyl/Leucyl_tRNA_Synth
description: Methionyl/Leucyl tRNA synthetase

phrase: DTYTLRTLHRTIAGVSQDYAALRNNTATAKLIEYTNHLTKEHRGSVPRVAVEPLVLMLAPLAPHLAEELWLRLGHTTSLANGPFPQADPAYLVDDTVEYPVQVNGKIRGRIVVAADA
type: DOMAIN
name: M/V/L/I-tRNA-synth_anticd-bd
description: Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding

phrase: PSGDGLHVGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: RNWIGRSSGATVLFSAILSRSDAATTEVDVEVFTTRPDTMFGVTYLVLAPEHNLVDELVATVWPDRTDPRWTYGAATPGAAVAAYRRAIVAKSDLDRQESKEKTGVFLGRYATNPATGKPVPIFVADYVLVGYGTGAVMAVPGHDPRDWDFAHKFHLPIVEVIAGSDISEAAYVGDGVLVNSGYLDGMDVATAQEAITAR
type: DOMAIN
name: Leu_tRNA-synth_edit
description: Leucyl-tRNA synthetase, editing domain
Protein sequence:
VDCGQVNSSLASCIPFLTGGVASPSASCCAGVQNLKTLAPTSADRRAACECIKAAAARFPTIKQDAASSLPKKCGVDINIPISKTTNCQAIN

Annotated regions:
phrase: CGQVNSSLASCIPFLTGGVASPSASCCAGVQNLKTLAPTSADRRAACECIKAAAARFPTIKQDAASSLPKKCGVDINIPISKTTN
type: DOMAIN
name: Bifunc_inhib/LTP/seed_store
description: Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain

phrase: CGQVNSSLASCIPFLTGGVASPSASCCAGVQNLKTLAPTSADRRAACECIKAAAARFPTIKQDAASSLPKKCGVDINIPISKTTN
type: DOMAIN
name: Bifunc_inhib/LTP/seed_store
description: Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
Protein sequence:
MANINFGFEHHASKLYSGAIEEGIQNSLVPMVIETSGRGERAFDIFSRLLRERIIFLGSGIDEHVAGLIMAQLIFLESEDPDRDIFIYVNSPGGSVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFLLASGAKGKRASLPHSRIMIHQPSGGAQGQESDIIIQAREIEKIRRLLEEIMAKHTGKDVQQVREDSERDRWMDAGEALEYGIIDQVFEKRPAPEKKD

Annotated regions:
phrase: TVCVGMAASMG
type: ACTIVE_SITE
name: ClpP_Ser_AS
description: ClpP, Ser active site

phrase: RASLPHSRIMIHQ
type: ACTIVE_SITE
name: ClpP_His_AS
description: ClpP, histidine active site
Protein sequence:
MQPCLVKIRRIRSGSDLPLPRYMTPHAAGMDLCADVDADLVLEPGERALVPTGIAIALPDGFEAQIRPRSGLALKHGIALVNSPGTIDPDYRGEIGVIIVNHGADAFVVRRGERIAQMVFAPFVRAELLDVDELDETARGDGGFGHTGR

Annotated regions:
phrase: AGMDLCADVDADLVLEPGERALVPTGIAIALPDGFEAQIRPRSGLALKHGIALVNSPGTIDPDYRGEIGVIIVNHGADAFVVRRGERIAQMV
type: DOMAIN
name: dUTPase_trimeric
description: dUTPase, trimeric

phrase: PLPRYMTPHAAGMDLCADVDADLVLEPGERALVPTGIAIALPDGFEAQIRPRSGLALKHGIALVNSPGTIDPDYRGEIGVIIVNHGADAFVVRRGERIAQMVFAPFVRAELLDVDELDETARGDGGFGHT
type: DOMAIN
name: dUTPase-like
description: dUTPase-like
Protein sequence:
MSRRSSRLQAKQHAQPNQPDSPQETQIIQAKKRKTAQDVKKRKEEITKKHQYEIRNCWPPVLSGGISPCIIIETPHKEIGTSDFSRFTNYRFKNLFINPSPLPDLSWACSQEVWQNMLQKENRYVHDKHFQVLHSDLEPQMRSILLDWLLEVCEVYTLHRETFYLAQDFFDRFMLTQKDVNKNMLQLIGITSLFIASKLEEIYAPKLQEFAYVTDGACSEVDILKMELNILKALKWELCPVTVISWLNLFLQVDAVKDVPKVLLPQYSQETFIQIAQLLDLCILAIDSLEFQYRILAAAALCHFTSIEVVKKASGLEWDDISECVDWMVPFVSVVKSVSPVKLKTFKKIPMEDRHNIQTHTNYLALLNEVNYVNIYRKGGQLSPVCNGGIMTPPKSTEKPPGKH

Annotated regions:
phrase: EVWQNMLQKENRYVHDKHFQVLHSDLEPQMRSILLDWLLEVCEVYTLHRETFYLAQDFFDRFMLTQKDVNKNMLQLIGITSLFIASKLEEIYAPKLQEFAYVTDGACSEVDILKMELNILKALKWEL
type: DOMAIN
name: Cyclin_N
description: Cyclin, N-terminal

phrase: VTVISWLNLFLQVDAVKDVPKVLLPQYSQETFIQIAQLLDLCILAIDSLEFQYRILAAAALCHFTSIEVVKKASGLEWDDISECVDWMVPFVSVVKSVSPVKLKTFKKIPMEDRHNIQTHTN
type: DOMAIN
name: Cyclin_C-dom
description: Cyclin, C-terminal domain

phrase: RSILLDWLLEVCEVYTLHRETFYLAQDFFDR
type: CONSERVED_SITE
name: Cyclins_cyclin-box
description: Cyclins, cyclin-box

phrase: DWLLEVCEVYTLHRETFYLAQDFFDRFMLTQKDVNKNMLQLIGITSLFIASKLEEIYAPKLQEFAYVTDGACSEVDILKMELNIL
type: DOMAIN
name: Cyclin-like_dom
description: Cyclin-like domain

phrase: VTVISWLNLFLQVDAVKDVPKVLLPQYSQETFIQIAQLLDLCILAIDSLEFQYRILAAAALCHFTSIEVVKKASGLEWDDISECVDWMVPFVSVVKSVSPVKLKTFKKIPMEDRHNIQTH
type: DOMAIN
name: Cyclin_C-dom
description: Cyclin, C-terminal domain
Protein sequence:
MSRHSRRMRILCLCATTLLMAGSALASEAGGHADGQLKDFLYRLLDFGITFGALYFLLRGPLKRALSARRQRVAEALEQARQMQASAERRFAACRQQLADADAQIAQLTADLKAESALQCQRIEEQARKMADDIRSEATRSAAREIEAARKQLHQEAVRLAMELAEQRLKQQIAPQDQARLVDEYLRKTGE

Annotated regions:
Protein sequence:
MYLKTIKLAGFKSFVDPTLIPIRGSMNAIVGPNGCGKSNVVDAVRWVIGETSAKQLRGQSMSDVIFNGTTSRKPVGKASIELHFDNSEGRIGGEYAKYGEIAIRREVERDGQSNYFINGAHVRRRDVVDVFLGTGLGPRSYAIVEQGMISNLIEAKPEELRVYIEEAAGISKYKERRRETESRMRHTQENLDRVNDIAEELAKQLRHLKRQANAAERYKAYKQEERALGAQFKVLQWKALDHKLSEHDQAINQKNTRREEKQSEQHRIETEIEKMREQLTDVNEKHNAVQKRYYGLGADIARLEQRIKDTQEKIHQWQSELEENENVWEELQNNTAECEAQITELETELEHLKPRSSDIHSAAAEASKELAQAESNMARWQEAWEAFQAETSQTMSQLEVMRTKREHCERQLTDLEKSKQQLQQNLKQLQLDQLLNEIAPLSSQSELLNAELSDSQSKLQSLAETIASRRDANQTTREELQTQRRELQALEARAASLEALQKAALGESDGKISEWLSSQQLKENPRLGQKLVVNPGWEIAVETVLSGFFDAVCVDAALPFLTDLTTVSEGRVTLVEKKSVSASAFDKAPTLASQVKSEWPFQQWLAGIYIADTLDQAKQLQSSLQENESVITKEGLWLGPHWARISKLQDAPQSGFLLREQQLKQLKANILGQQKKCDEQEALLKSGEQQLNQLETDRDTLLQTYQKLNAEATTVQSALSTKQAQLDNAQQQQTRLKIGLNECEQQIEQCQQQLTLIKNKASSLDDSQGLLATRREEMIRERDHYRTQLIELREKAHQKRKEADELEIRLASNEDQLSLLRQTVARDQRQLKQLTERREMLSQYLSEGDKPLEELNEKLQTQLEQRLILETELREVEKELEEANQLLRHLEEKRVSTQKALNEAQAQLEELRMQRQTVSVRQTTIKEQLSENDFDLEQVMAELPEEATIESWQEKLDQLVERIQRMGPINLAAIEEYESVNERKNYLDKQHADLTEALEILKNAIHKIDRETRAKFQETYDQVNQQFQSLFPRIFGGGRATLEMTDTDLLTAGVIVRAQPPGKRNVTIHMLSGGEKALTAVALVFSLFQLNPAPFCILDEVDAPLDDINVGRFCQLVKEMSKEVQFLVISHNKVTIEMADYLMGVTMQEPGVSRIVSVNMQEAIGLVEA

Annotated regions:
phrase: YLKTIKLAGFKSFVDPTLIPIRGSMNAIVGPNGCGKSNVVDAVRWVIGETSAKQLRGQSMSDVIFNGTTSRKPVGKASIELHFDNSEGRIGGEYAKYGEIAIRREVERDGQSNYFINGAHVRRRDVVDVFLGTGLGPRSYAIVEQGMISNLIEAKPEELRVYIEEAAGISKYKERRRETESRMRHTQENLDRVNDIAEELAKQLRHLKRQANAAERYKAYKQEERALGAQFKVLQWKALDHKLSEHDQAINQKNTRREEKQSEQHRIETEIEKMREQLTDVNEKHNAVQKRYYGLGADIARLEQRIKDTQEKIHQWQSELEENENVWEELQNNTAECEAQITELETELEHLKPRSSDIHSAAAEASKELAQAESNMARWQEAWEAFQAETSQTMSQLEVMRTKREHCERQLTDLEKSKQQLQQNLKQLQLDQLLNEIAPLSSQSELLNAELSDSQSKLQSLAETIA
type: DOMAIN
name: RecF/RecN/SMC_N
description: RecF/RecN/SMC, N-terminal

phrase: QLEQRLILETELREVEKELEEANQLLRHLEEKRVSTQKALNEAQAQLEELRMQRQTVSVRQTTIKEQLSENDFDLEQVMAELPEEATIESWQEKLDQLVERIQRMGPINLAAIEEYESVNERKNYLDKQHADLTEALEILKNAIHKIDRETRAKFQETYDQVNQQFQSLFPRIFGGGRATLEMTDTDLLTAGVIVRAQPPGKRNVTIHMLSGGEKALTAVALVFSLFQLNPAPFCILDEVDAPLDDINVGRFCQLVKEMSKEVQFLVISHNKVTIEMADYLMGVTMQEPGV
type: DOMAIN
name: RecF/RecN/SMC_N
description: RecF/RecN/SMC, N-terminal

phrase: PRLGQKLVVNPGWEIAVETVLSGFFDAVCVDAALPFLTDLTTVSEGRVTLVEKKSVSASAFDKAPTLASQVKSEWPFQQWLAGIYIADTLDQAKQL
type: DOMAIN
name: SMC_hinge
description: SMCs flexible hinge

phrase: LKENPRLGQKLVVNPGWEIAVETVLSGFFDAVCVDAALPFLTDLTTVSEGRVTLVEKKSVSASAFDKAPTLASQVKSEWPFQQWLAGIYIADTLDQAKQL
type: DOMAIN
name: SMC_hinge
description: SMCs flexible hinge
Protein sequence:
MIILKNANIVGVRNGTIVNGSIGINGDKIAFVDYIDYNNHNNDNIYNKNENTQEIRRKQRFNTRSEAPVKIIDLKGKFVCPTFIDAHIHIESSHITPSEFEKYALKYGVSKVIIDPHEIANVVGVNGIKFMLNDAKLLDVYCMVPSCVPATELETNGAPITSKDIEELFKQNNYRILGLGEVMNYIGVINKDKNIIDKINMAKKYNKLIDGHAPQLTREDLINYVNMGIMSDHECTTEDEALEKLQLGLKLMVREGTASKNIYLLKIIDILKRKGTYNKLFKNIMLVSDDISVKDLKEGYLINTLKKAVKYVSPIEAIQMITINPANYFGLDMEIKPDNYADLIIFDDLEEFKINSVIIKGKFLNELNKYNKNNNIKNNKNNNDNLINKSINYNYKTENDFLIDGIDGGGAPISTNSKVRIIEPIGSSLITNEIMLNIDDAKTKLKNNEINRIFVLERHRNTNKIGKGLIKYLKTGTIASSYAHDSHNVIVIGNNLKDIAIAVNHLKDMGGGFVAVKDGKIIEQVKLNMGGIMGADGEYIYKKINDIENKTKNWSIIENNNLFLSMSFLSLSVIPNLKITDFGLIKNNKIVNLVEL

Annotated regions:
phrase: LITNEIMLNIDDAKTKLKNNEINRIFVLERHRNTNKIGKGLIKYLKTGTIASSYAHDSHNVIVIGNNLKDIAIAVNHLKDMGGGFVAVKDGKIIEQVKLNMGGIMGADGEYIYKKINDIENKTKNWSIIENNNLFLSMSFLSLSVIPNLKITDFGLIKN
type: DOMAIN
name: Adenine_deam_C
description: Adenine deaminase C-terminal domain

phrase: FVCPTFIDAHIHIESSHITPSEFEKYALKYGVSKVIIDPHEIANVVGVNGIKFMLNDAKLLDVYCMVPSCVPATELETNGAPITSKDIEELFKQNNYRILGLGEVMNYIGVINKDKNIIDKINMAKKYNKLIDGHAPQLTREDLINYVNMGIMSDHECTTEDEALEKLQLGLKLMVREGTASKNIYLLKIIDILKRKGTYNKLFKNIMLVSDDISVKDLKEGYLINTLKKAVKYVSPIEAIQMITINPANYFGLDMEIKPDNYADLIIFDDLEEFKINSVIIKGK
type: DOMAIN
name: Amidohydro-rel
description: Amidohydrolase-related
Protein sequence:
RFKKIRRLGALPGLTSKRPRSGNDLKNQLRSVKRSQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKVKGSTGQVLLQLLEMRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRCKPQDIITTKDKQRSKALIQNYIASSTQPQEELPNHLTIDAFQYKGLVNQIIDSKWIGLKIN

Annotated regions:
phrase: LEMRLDNILFRLGMASTIPGARQL
type: CONSERVED_SITE
name: Ribosomal_uS4_CS
description: Small ribosomal subunit protein uS4, conserved site

phrase: MRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRCKPQDIITTKDKQRSKALIQNY
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: RFKKIRRLGALPGLTSKRPRSGNDLKNQLRSVKRSQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKVKGSTGQVLLQLL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: KKIRRLGALPGLTSKRPRSGNDLKNQLRSVKRSQYRIRLEEKQKLRFHYGLTERQLLKYVHIAGKVKGSTGQVLLQLL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: MRLDNILFRLGMASTIPGARQLVNHRHILVNGRIVDIPSYRCKPQDI
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain
Protein sequence:
MELMVVEADAKLRVARLIDANLDRAREGLRVIEDWCRFGLDRDDLVLPLKDWRQRLGQQHHDRYRRARSTATDVAAGLGHPAQTSRCSAPAIIKANASRVQEALRVLEEFGRNLDPDLASTAAEIRYGLYDLEVRILEACGRQHRQERLEGAKLCLITDPDRDNNLERLLHGVEAALMAGVSLVQYRRKQGNDKQRLLEAQALKTLCSRFEALFIVNDRIDLALLVDADGVHLGQDDLPLSEARQLLGPERLLGRSTHRLEHLLEAQQAGADYLGVGPVFATKTKRDLSPAGLSWVTEASRHAAVPWFAIGGIDIETIPSVRAAGAQRVAVVSAIMSSNDPEEASRTLLQTLA

Annotated regions:
phrase: RLIDANLDRAREGLRVIEDWCRFGLDRDDLVLPLKDWRQRLGQQHHDRYRRARSTATDVAAGLGHPAQTSRCSAPAIIKANASRVQEALRVLEEFGRNLDPDLASTAAEIRYGLYDL
type: DOMAIN
name: ThiD2
description: ThiD2

phrase: LCLITDPDRDNNLERLLHGVEAALMAGVSLVQYRRKQGNDKQRLLEAQALKTLCSRFEALFIVNDRIDLALLVDADGVHLGQDDLPLSEARQLLGPERLLGRSTHRLEHLLEAQQAGADYLGVGPVFATKTKRDLSPAGLSWVTEASRHAAVPWFAIGGIDIETIPSVRAAGAQRVAVVSAIMSSNDPEEASRTLL
type: DOMAIN
name: ThiamineP_synth_TenI
description: Thiamine phosphate synthase/TenI

phrase: LCLITDPDRDNNLERLLHGVEAALMAGVSLVQYRRKQGNDKQRLLEAQALKTLCSRFEALFIVNDRIDLALLVDADGVHLGQDDLPLSEARQLLGPERLLGRSTHRLEHLLEAQQAGADYLGVGPVFATKTKRDLSPAGLSWVTEASRHAAVPWFAIGGIDIETIPSVRAAGAQRVAVVSA
type: DOMAIN
name: ThiamineP_synth_TenI
description: Thiamine phosphate synthase/TenI
Protein sequence:
MDLKFNNSRKYVSISVPSKTQAMSPHIKSVEDVVVLGVNLSKFSKLTQFLICVAGVFVFYLIYGYLQELIFSVEGFKPYGWYLTLVQFAFYSVFGLIELQLTQDRRRRIPGKTYMLIAFLTVGTMGLSNTSLGYLNYPTQVIFKCCKLIPVMLGGVFIQGKRYNLADVSAAVCMSLGLIWFTLADSTIAPNFNLTGVMLISLALCADAVIGNVQEKAMKLHNASNSEMVLYSYSIGFVYILLGLSCTSGLGPAVAFCSKNPVGTYGYAFLFSLTGYFGISFVLALIKIFGALLAVTVTTGRKAMTVVLSFLFFAKPFTFQYIWSGLLVVLGIFLNVYSKNMDKIRLPSVYNMIKKAMDMKKSRTLAQTV

Annotated regions:
Protein sequence:
MLIKQGDRLINTRNWSELVKPEQITRDSDPADAMYGKFVCEPLERGYGTTIGNALRRVLLSSLQGAAFVSVKVSGVQHEFTTIPGVLEDVTDIVLNLKQVRLAMDTDEPQFLELSVNKKGAVKAGDIKTNQHVMVLNPDLHIATLTEDLELTFEFEVRMGKGYVPADMHEGLSEEIGLIKLDSSFAPVRKVAYTVEQARVGQMTNYDKLIIEVWTDGSVTPEDAIAYSAKIIKDQISVFINFDERISGESSGNSSGSSDVNENLFKGIDELELSVRATNCLKSANITLVGELVQKSENEMLKTKNFGRKSLDEIKRVLCDMSLDFGMKVDGFEKKYQEWKRKQQNEA

Annotated regions:
phrase: EPLERGYGTTIGNALRRVLLSSLQGAAFVSVKVSGVQHEFTTIPGVLEDVTDIVLNLKQVRLAMDTDEPQFLELSVNKKGAVKAGDIKTNQHVMVLNPDLHIATLTEDLELTFEFEVRMGKGYVPADMHEGLSEEIGLIKLDSSFAPVRKVAYTVEQARVGQMTNYDKLIIEVWTDGSVTPEDAIAYSAKIIKD
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: VKVSGVQHEFTTIPGVLEDVTDIVLNLKQVRLAMDTDEPQFLELSVNKKGAVKAGDIKTNQHVMVLNPDLHIATLTEDLELTFEFEVRMGKGYVPADMHEGLSEEIGLIKLDSS
type: DOMAIN
name: DNA-dir_RNA_pol_insert
description: DNA-directed RNA polymerase, insert domain

phrase: YGKFVCEPLERGYGTTIGNALRRVLLSSLQGAAFVSVKVSGVQHEFTTIPGVLEDVTDIVLNLKQVRLAMDTDEPQFLELSVNKKGAVKAGDIKTNQHVMVLNPDLHIATLTEDLELTFEFEVRMGKGYVPADMHEGLSEEIGLIKLDSSFAPVRKVAYTVEQARVGQMTNYDKLIIEVWTDGSVTPEDAIAYSAKIIKDQISVFIN
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: DVNENLFKGIDELELSVRATNCLKSANITLVGELVQKSENEMLKTKNFGRKSLDEIKRV
type: DOMAIN
name: RNAP_asu_C
description: RNA polymerase, alpha subunit, C-terminal
Protein sequence:
MAKNKIRVRYAPSPTGHLHIGNARTALFNYLFARHNKGTFVLRIEDTDTKRNIADGEKSQMDNLEWLGIDWDEGPDKPGKYGPYRQSERKDIYKPLIQELLDKDLAYESFMTEEELQAQREEQKARGEAPRYVYEYEGMSKEEIKKAQDEARAKGLKPVVRIRVPHNKTYEWDDIVKGKISFLSDTIGGDFVIQKRDGMPTYNFAVVVDDHLMEITHVLRGDDHVANTPKQLVVYEAFGWKAPEFGHMSLIINTETGKKLSKRDETVLQFIEQYRELGYLPDAMFNFITLLGWSPVGESEIFNKQEFIKMFDAKRLSKSPAAFDGKKLEWINNQYVKAAKEDEIMDSSLRQLIKAGKVQADPDAYTIEWARKLISLYKQQMSYTGQIVEMADVFFNEPPVLSEDAKKELADESAAIVLKEFAERVKDLPIFDAVEIQNTIRSIQKDTKIKGRKLYMPIRIATTREMHGPELAPSIELLGREKALKHLKQTLEEMN

Annotated regions:
phrase: PSPTGHLHIGN
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: YTIEWARKLISLYKQQMSYTGQIVEMADVFFNEPPVLSEDAKKELADESAAIVLKEFAERVKDLPIFDAVEIQNTIRSIQKDTKIKGRKLYMPIRIATTREMHGPELAPSIELLGREKALKHLKQ
type: DOMAIN
name: aa-tRNA-synth_I_cd-bd
description: Aminoacyl-tRNA synthetase, class I, anticodon-binding

phrase: KIRVRYAPSPTGHLHIGNARTALFNYLFARHNKGTFVLRIEDTDTKRNIADGEKSQMDNLEWLGIDWDEGPDKPGKYGPYRQSERKDIYKPLIQELLDKDLAYESFMTEEELQAQREEQKARGEAPRYVYEYEGMSKEEIKKAQDEARAKGLKPVVRIRVPHNKTYEWDDIVKGKISFLSDTIGGDFVIQKRDGMPTYNFAVVVDDHLMEITHVLRGDDHVANTPKQLVVYEAFGWKAPEFGHMSLIINTETGKKLSKRDETVLQFIEQYRELGYLPDAMFNFITLLGWSPVGESEIFNKQEFIKMFDAKRLSKSPAAFDGKKLE
type: DOMAIN
name: Glu/Gln-tRNA-synth_Ib_cat-dom
description: Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain

phrase: KIRVRYAPSPTGHLHIGNARTALFNYLFARHNKGTFVLRIEDTDTKRNIADGEKSQMDNLEWLGIDWDEGPDKPGKYGPYRQSERKDIYKPLIQELLDKDLAYESFMTEEELQAQREEQKARGEAPRYVYEYEGMSKEEIKKAQDEARAKGLKPVVRIRVPHNKTYEWDDIVKGKISFLSDTIGGDFVIQKRDGMPTYNFAVVVDDHLMEITHVLRGDDHVANTPKQLVVYEAFGWKAPEFGHMSLIINTETGKKLSKRDETVLQFIEQYRELGYLPDAMFNFITLLGWSPVGESEIFNKQEFIKMFDAKRLSKSPAAFDGKKLEWINNQYV
type: DOMAIN
name: GluRS_core
description: Glutamyl-tRNA synthetase
Protein sequence:
MINEIKKDAQERMDKSVEALKNNLSKVRTGRAHPSLLSGISVEYYGAATPLNQVANVVAEDARTLAITVFDKELTQKVEKAIMMSDLGLNPMSAGTIIRVPLPPLTEERRKDLVKIVRGEAEGGRVAVRNIRRDANNDLKALLKDKEISEDEDRKAQEEIQKLTDVAVKKIDEVLAAKEKELMEV

Annotated regions:
phrase: LKNNLSKVRTGRAHPSLLSGISVEYYGAATPLNQVANVVAEDARTLAITVFDKELTQKVEKAIMMSDLGLNPMSAGTIIRVPLPPLTEERRKDLVKIVRGEAEGGRVAVRNIRRDANNDLKALLKDKEISEDEDRKAQEEIQKLTDVAVKKIDEVLAAKEKEL
type: DOMAIN
name: Ribosome_recyc_fac_dom
description: Ribosome recycling factor domain
Protein sequence:
MDNRTLTHLRQLEAESIHIIREVVAEFENPVMLYSIGKDSSVMLHLARKAFYPGTPPFPLMHVDTTWKFREMIEFRDRMAKEAGMELIVHINQEGVAQGIGPFSHGSRVHTDVMKTQSLKQALDKYRFDAAFGGARRDEERSRAKERVYSFRDRNHAWDPKNQRPELWRLYNGQVHKGESIRVFPLSNWTELDIWQYIYLEEIPIVPLYYAARRPVVERDGTLIMVDDDRMPLEPGEEPEMAMVRFRTLGCYPLTGAIRSEAATLPEIIQEMLLTKSSERQGRVIDHDAAGSMEEKKRQGYF

Annotated regions:
phrase: NPVMLYSIGKDSSVMLHLARKAFYPGTPPFPLMHVDTTWKFREMIEFRDRMAKEAGMELIVHINQEGVAQGIGPFSHGSRVHTDVMKTQSLKQALDKYRFDAAFGGARRDEERSRAKERVYSFRDRNHAWDPKNQRPELWRLYNGQVHKGESIRVFPLSNWTELDIWQYIYLEEIPIVPLYYAARRPVVERDGTLIMVDDDRMPLEPGEEPEMAMVRFRTLGCYPLT
type: DOMAIN
name: PAPS_reduct
description: Phosphoadenosine phosphosulphate reductase
Protein sequence:
MRRLIPILLGSLVLSLSILVAPAASWAYPFWAQQNYDNPREATGKIVCANCHLAQKTTQAEVPQSVLPDSVFKAVVKIPYKKDTTEISSDGSDVPLQVGAVVMLPDGFRLAPQDRWSEEIKEETKGVFFTQYSEEKENILLVGPLPGDNNKEIVFPILSPDPATDSSIQFGKYSIHVGGNRGRGQILPTGEKTNNNAFTATEAGTITSIKSGKNGESDIKLKTDSGKVISETIPAGPSLLVKVDDKVEAGAPLTSDPNSGGFGQLDTEVVLQNPVRIYGLLAFFVAVSLAQILLVLKKKQVEKVQAAEGI

Annotated regions:
phrase: YPFWAQQNYDNPREATGKIVCANCHLAQKTTQAEVPQSVLPDSVFKAVVKIPYKKDTTEISSDGSDVPLQVGAVVMLPDGFRLAPQDRWSEEIKEETKGVFFTQYSEEKENILLVGPLPGDNNKEIVFPILSPDPATDSSIQFGKYSIHVGGNR
type: DOMAIN
name: Cyt_f_lg_dom
description: Cytochrome f large domain
Protein sequence:
MNSTFSSVSSHYLRARIGKICVAIIGSTPVDLVQKAETAYRETTFLEFRIDYLPKPLAALPALKEFLGKHPEVTAIATCRREAVGGRFVGTSHAELDVLQKAIASGCQLVDVELQTAEEIRPAAMDKLRAQGGGLILSYHDFVTTKDLDGVFERMLAFEPEFIKVVSTARSLADNVALIRFLERARDKANVVGICMGEQGVISRILGPRSGSVFTFASATTGEETAPGQLSAQTLLELYRVDQLDAATKVYGVAGNPVTHSLSPTMLNAAFRRERVNSVYLPLQTSALSDLLTLVREVPLSGLSVTMPFKQEILKHLQKTDAISEKIGACNTVVRSQDGKLYGFNTDVAAVVRPLEKRLVLRGAKVLVLGAGGAARAAVFGLKEKGAEVSILNRSLLNAQKLAKEAKAKVAKAEQLGKSDFDVIVNATPVGMGGVKTHSLLKPEEINARIVFDLVYNPIDTPLIKAARAKNIPVITGIEMFVHQGARQFEIWTGKPAPEDEMLRVVLHSLRQRAATANGSH

Annotated regions:
phrase: GIEMFVHQGARQFEIWTGKPAPEDEMLRVV
type: DOMAIN
name: SDH_C
description: SDH, C-terminal

phrase: DVELQTAEEIRPAAMDKLRAQGGGLILSYH
type: ACTIVE_SITE
name: 3-dehydroquinate_DH_AS
description: 3-dehydroquinate dehydratase, active site

phrase: VAGNPVTHSLSPTMLNAAFRRERVNSVYLPLQTSALSDLLTLVREVPLSGLSVTMPFKQEILKHLQKTDAISEKIGACNT
type: DOMAIN
name: Shikimate_DH-bd_N
description: Shikimate dehydrogenase substrate binding, N-terminal

phrase: LRGAKVLVLGAGGAARAAVFGLKEKGAEVSILNRSLLNAQKLAKEAKAKVAKAEQLGKSDFDVIVNA
type: DOMAIN
name: Shikm_DH/Glu-tRNA_Rdtase
description: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase
Protein sequence:
MSQLLTARQAEELHKSIIAYLASVNLTESSAALRAELGDSVSIDDATLKKYEGLLEKKWTSVVRLQKKIMDLESRCAALQSELDSATPTSLLRKNQDPTSWLPRSPARHILEGHRNPVTCVAFHPVFSSLASGSDDTTIKIWDWELGELERTVKGHTKAVLDVDYGGPRGGTLLASCSSDLTIKLWDPSDNYKNIRTLPGHDHSVSSVRFIPSGAAGSPMSGNLLVSASRDKTLRIWDVTTGYCVKTLSGHVDWVRAVAPSIDGRFLLAAGDDRIPRLWDLSSAETKSTFLGHEHVIECVAIAPAASYPHLAVLSGLKKPPPASSSAEFFATGSRDKTIRLWDSRGNLIKTLVGHDNWVRALAFHPGGKHLLSVADDKTIRCWDLTQECKCVRVISDAHGHFVTCLRWAPPLIKDGGANGEAETNGTPAATSTTNGVRPDPNVATKISIRCVIATGSVDQKVRIFAT

Annotated regions:
phrase: VKGHTKAVLDVDYGGPRGGTLLASCSSDLTIKLW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: SSSAEFFATGSRDKTIRLW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LEGHRNPVTCVAFHPVFSSLASGSDDTTIKIWDWELGELER
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LVGHDNWVRALAFHPGGKHLLSVADDKTIRCWD
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: GNLIKTLVGHDNWVRALAFHPGGKHLLSVADDKTIRCW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: ELERTVKGHTKAVLDVDYGGPRGGTLLASCSSDLTIKLW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: HILEGHRNPVTCVAFHPVFSSLASGSDDTTIKIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: KNIRTLPGHDHSVSSVRFIPSGAAGSPMSGNLLVSASRDKTLRIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: GYCVKTLSGHVDWVRAVAPSIDGRFLLAAGDDRIPRLW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: STFLGHEHVIECVAIAPAASYPHLAVLSGLKKPPPASSSAEFFATGSRDKTIRLW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LVSASRDKTLRIWD
type: CONSERVED_SITE
name: WD40_repeat_CS
description: WD40 repeat, conserved site

phrase: QAEELHKSIIAYLASVNLTESSAALRAELGDS
type: CONSERVED_SITE
name: LisH
description: LIS1 homology motif

phrase: LSGHVDWVRAVAPSIDGRFLLAAGDDRIPRLWDLSSAETKS
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LASGSDDTTIKIWD
type: REPEAT
name: G-protein_beta_WD-40_rep
description: G-protein beta WD-40 repeat

phrase: LVSASRDKTLRIWD
type: REPEAT
name: G-protein_beta_WD-40_rep
description: G-protein beta WD-40 repeat

phrase: FATGSRDKTIRLWD
type: REPEAT
name: G-protein_beta_WD-40_rep
description: G-protein beta WD-40 repeat

phrase: LGELERTVKGHTKAVLDVDYGGPRGGTLLASCSSDLTIKLW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: RGNLIKTLVGHDNWVRALAFHPGGKHLLSVADDKTIRCW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: ECKCVRVISDAHGHFVTCLRWAPPLIKDGGANGEAETNGTPAATSTTNGVRPDPNVATKISIRCVIATGSVDQKVRIF
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: NYKNIRTLPGHDHSVSSVRFIPSGAAGSPMSGNLLVSASRDKTLRIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: TGYCVKTLSGHVDWVRAVAPSIDGRFLLAAGDDRIPRLW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: SAETKSTFLGHEHVIECVAIAPAASYPHLAVLSGLKKPPPASSSAEFFATGSRDKTIRLW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: RSPARHILEGHRNPVTCVAFHPVFSSLASGSDDTTIKIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LPGHDHSVSSVRFIPSGAAGSPMSGNLLVSASRDKTLRIWDVTTGYCVK
type: REPEAT
name: WD40_rpt
description: WD40 repeat
Protein sequence:
MVLACQFPEDENGLSRVSDKSMTIGIVIVAAGRGERAGAPEEGPKQYRPIGGRPVIARTLECFLSWPRSGPVVVVTHPDDDGLFAAATAGIANVERVVTTAGGDTRQRSVFEGLRVLSGTDATHVMIHDAARPFCDHALLDRVADALAAGEDGALPLMPVTDTLKRGSAEGLVHETVPRAGLYSAQTPQGFHLASIRAAHEKAAALRRGDFTDDASIAEWAGLAVRMVEGSPDNIKLTLKRDIDLADEKLSRRALPDVRTGNGYDVHQLEPGDGVTLCGVFIPHDQTLKGHSDADVALHALTDALLATCGAGDIGDHFPPSDMQWKGAPSKIFLEHAAKIVREHGGTIMNADVSLIAEAPKIGPHRQAMRENLAAILGISLDRCSVKATTNEKIGFVGRREGIAAIATATVVYRGESR

Annotated regions:
phrase: RTGNGYDVHQLEPGDGVTLCGVFIPHDQTLKGHSDADVALHALTDALLATCGAGDIGDHFPPSDMQWKGAPSKIFLEHAAKIVREHGGTIMNADVSLIAEAPKIGPHRQAMRENLAAILGISLDRCSVKATTNEKIGFVGRREGIAAIATAT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: EKLSRRALPDVRTGNGYDVHQLEPGDGVTLCGVFIPHDQTLKGHSDADVALHALTDALLATCGAGDIGDHFPPSDMQWKGAPSKIFLEHAAKIVREHGGTIMNADVSLIAEAPKIGPHRQAMRENLAAILGISLDRCSVKATTNEKIGFVGRREGIAAIATATV
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: VRTGNGYDVHQLEPGDGVTLCGVFIPHDQTLKGHSDADVALHALTDALLATCGAGDIGDHFPPSDMQWKGAPSKIFLEHAAKIVREHGGTIMNADVSLIAEAPKIGPHRQAMRENLAAILGISLDRCSVKATTNEKIGFVGRREGIAAIATATVV
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: VMIHDAA
type: CONSERVED_SITE
name: ISPD_synthase_CS
description: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site

phrase: RTGNGYDVHQLEPGDGVTLCGVFIPHDQTLKGHSDADVALHALTDALLATCGAGDIGDHFPPSDMQWKGAPSKIFLEHAAKIVREHGGTIMNADVSLIAEAPKIGPHRQAMRENLAAILGISLDRCSVKATTNEKIGFVGRREGIAAIATAT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: SDADVALHALTDALL
type: CONSERVED_SITE
name: MECDP_synthase_CS
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site

phrase: RTGNGYDVHQLEPGDGVTLCGVFIPHDQTLKGHSDADVALHALTDALLATCGAGDIGDHFPPSDMQWKGAPSKIFLEHAAKIVREHGGTIMNADVSLIAEAPKIGPHRQAMRENLAAILGISLDRCSVKATTNEKIGFVGRREGIAAIATATV
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Protein sequence:
MPEIASLQLFKILSDETRLGIVLLLREMGELCVCDLCTALEQSQPKTSRHLAMLRESGLLLDRKQGKWVHYRLSPHIPSWAALVIEQAWLSQQDDVQAIARKLASANCSGSGKAVCI

Annotated regions:
phrase: DETRLGIVLLLREMGELCVCDLCTALEQSQPKTSRHLAMLRESG
type: DOMAIN
name: HTH_ArsR_DNA-bd_dom
description: HTH ArsR-type DNA-binding domain

phrase: QLFKILSDETRLGIVLLLREMGELCVCDLCTALEQSQPKTSRHLAMLRESGLLLDRKQGKWVHYRLSPHIPSWAALVI
type: DOMAIN
name: HTH_ArsR_DNA-bd_dom
description: HTH ArsR-type DNA-binding domain

phrase: FKILSDETRLGIVLLLREMGELCVCDLCTALEQSQPKTSRHLAMLRESGLLLDRKQGKWVHYRLS
type: DOMAIN
name: ArsR-like_HTH
description: ArsR-like helix-turn-helix domain

phrase: CVCDLCTALEQSQPKTSR
type: CONSERVED_SITE
name: ArsR_HTH
description: ArsR-type transcription regulator, HTH motif

phrase: FKILSDETRLGIVLL
type: DOMAIN
name: HTH_ArsR_DNA-bd_dom
description: HTH ArsR-type DNA-binding domain

phrase: ELCVCDLCTAL
type: DOMAIN
name: HTH_ArsR_DNA-bd_dom
description: HTH ArsR-type DNA-binding domain

phrase: SQPKTSRHLAMLRES
type: DOMAIN
name: HTH_ArsR_DNA-bd_dom
description: HTH ArsR-type DNA-binding domain

phrase: GLLLDRKQGKWVHYR
type: DOMAIN
name: HTH_ArsR_DNA-bd_dom
description: HTH ArsR-type DNA-binding domain

phrase: MPEIASLQLFKILSDETRLGIVLLLREMGELCVCDLCTALEQSQPKTSRHLAMLRESGLLLDRKQGKWVHYRLSPHIPSWAALVIEQAWLS
type: DOMAIN
name: HTH_ArsR_DNA-bd_dom
description: HTH ArsR-type DNA-binding domain