nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MPQISRQEYAGLFGPTTGDKIRLGDTNLFIEIEKDLRGYGEESVYGGGKSLRDGMGANNHLTRDNGVLDLVITNVTIVDARLGVIKADVGIRDGKIAGIGKSGNPGVMDGVTPGMVVGVSTDAISGEHLILTAAGIDSHIHLISPQQAYHALSNGVATFFGGGIGPTDGTNGTTVTPGPWNIRQMLRSVEGLPVNVGILGKGNSYGRGPLLEQAIAGVVGYKVHEDWGATANALRHSLRMADEMDIQVSVHTDSLNECGYVEDTIDAFEGRTIHTFHTEGAGGGHAPDIIRVASQPNVLPSSTNPTLPYGVNSQAELFDMIMVCHNLNPNVPADVSFAESRVRPETIAAENVLHDMGVISMFSSDSQAMGRVGENWLRVMQTANAMKASRGKLPEDAPGNDNFRVLRYVAKITINPAIAQGVSHVIGSVEVGKMADLVLWDPRFFGAKPKMVIKGGMINWAAMGDPNASLPTPQPVFYRPMFGAMGKTMQDTCVTFVSQAALDDGVKEKAGLDRQVIAVKNCRTISKHDLVRNDQTPNIEVDPETFAVKVDGVHATCEPIDTAAMNQRYFFG

Annotated regions:
phrase: ILTAAGIDSHIHLISPQQAYHALSNGVATFFGGGIGPTDGTNGTTVTPGPWNIRQMLRSVEGLPVNVGILGKGNSYGRGPLLEQAIAGVVGYKVHEDWGATANALRHSLRMADEMDIQVSVHTDSLNECGYVEDTIDAFEGRTIHTFHTEGAGGGHAPDIIRVASQPNVLPSSTNPTLPYGVNSQAELFDMIMVCHNLNPNVPADVSFAESRVRPETIAAENVLHDMGVISMFSSDSQAMGRVGENWLRVMQTANAMKASRGKLPEDAPGNDNFRVLRYVAKITINPAIAQGVSHVIGSVEVGKMADLVLWDPRFFGAKPKMVIKGGMI
type: DOMAIN
name: Amidohydro-rel
description: Amidohydrolase-related

phrase: QISRQEYAGLFGPTTGDKIRLGDTNLFIEIEKDLRGYGEESVYGGGKSLRDGMGANNHLTRDNGVLDLVITNVTIVDARLGVIKADVGIRDGKIAGIGKSGNPGVMDGVTPGMVVGVSTDA
type: DOMAIN
name: Urease_alpha_N_dom
description: Urease alpha-subunit, N-terminal domain

phrase: TAAGIDSHIHLIS
type: BINDING_SITE
name: Urease_Ni-bd
description: Urease nickel binding site

phrase: AGIDSHIHLISPQQAYHALSNGVATFFGGGIGPTDGTNGTTVTPGPWNIRQMLRSVEGLPVNVGILGKGNSYGRGPLLEQAIAGVVGYKVHEDWGATANALRHSLRMADEMDIQVSVHTDSLNECGYVEDTIDAFEGRTIHTFHTEGAGGGHAPDIIRVASQPNVLPSSTNPTLPYGVNSQAELFDMIMVCHNLNPNVPADVSFAESRVRPETIAAENVLHDMGVISMFSSDSQAMGRVGENWLRVMQTANAMKASRGKLPEDAPGNDNFRVLRYVAKITINPAIAQGVSHVIGSVEVGKMADLVLWDPRFFGAKPKMVIKGGMINWAAMGDPNASLPTPQPVFYRPMFGAMGKTMQDTCVTFVSQAALDDGVKEKAGLDRQVIAVKNCRTISKHDLVRNDQTPNIEVDPETFAVKVDGVHATCEPIDTAAMNQRYFF
type: DOMAIN
name: Urease_asu_c
description: Urease alpha subunit, C-terminal

phrase: MVCHNLNPNVPADVSF
type: ACTIVE_SITE
name: Urease_AS
description: Urease active site
Protein sequence:
MTSVPIFESVSRFLPPANEDEQYWWKITGQHMARMMHEAGYPEDRQVECLLFHRFKVIPCLGPRPRSDTPWYKSRVGGGAADGCPINYSWRFGTADRKPHIRNFIEPLGALTNTPADPLNEVATKALLQDYSMTLPNVDLEAFWTFAPHYRPRIIEKADIEKLAGASLLVGAEMSPDSHTIDIKAYMYPRVPSQTSQLLTTILPQAMRDAYGENVCLDSLNFVHEFMTKDPQGSQLVLTGTTGIDCCKLQDTRVKIYVITRNTSFDHIAAIMTLGGRRPISEELLGQLKALWYELKGAPAELPSSEQLPVQTKPDGSKNPIVVPFYFDIQPRLALPDVKAYIDVSTSPVSDLAAANAVVRHLEQHGSGQNPKAYLNVLKDITPVEELETQKGVLAFYSVAVKKNELDITSYFNPQVYKRYFAHEVHLNGQRRSVFE

Annotated regions:
Protein sequence:
MRNYVEIVDVTARQILDSRANPTVEVEVILEDGTEGRAAVPSGASTGAFEAVELRDEDKEKYMGKGVLKAVENVNNYIAEELIGMNVFDQVLIDKTMLELDGTHNKGKLGANATLGVSLACARAAAKYLGLSLYQYIGGVNAKVLPVPMMNIVNGGKHADNNVDLQEFMIMPVGAPSFTEALRMSSEVYHTLKSLLKSKGQDTGVGDEGGFAPNLNSNEEAIQIIVEAVEKAGYVPGKDIFIALDPASTEIYEDGKYNLKSEGKVLSSEEMVDYYVTLVNKYPIISIEDAMAEEDWEGWSILTEKLGDKVQLVGDDLFVTNTERLKKGIDKKVANSILIKLNQIGTLTETLNAIEMAERAGYTAVVSHRSGETEDTTIADLVVAVNAGQIKTGAPARSERVAKYNQLLRIEEELGETAEYRGLNTFYNIK

Annotated regions:
phrase: IVDVTARQILDSRANPTVEVEVILEDGTEGRAAVPSGASTGAFEAVELRDEDKEKYMGKGVLKAVENVNNYIAEELIGMNVFDQVLIDKTMLELDGTHNKGKLGANATLGVSLACARAAAKYLGLSLYQY
type: DOMAIN
name: Enolase_N
description: Enolase, N-terminal

phrase: KVLPVPMMNIVNGGKHADNNVDLQEFMIMPVGAPSFTEALRMSSEVYHTLKSLLKSKGQDTGVGDEGGFAPNLNSNEEAIQIIVEAVEKAGYVPGKDIFIALDPASTEIYEDGKYNLKSEGKVLSSEEMVDYYVTLVNKYPIISIEDAMAEEDWEGWSILTEKLGDKVQLVGDDLFVTNTERLKKGIDKKVANSILIKLNQIGTLTETLNAIEMAERAGYTAVVSHRSGETEDTTIADLVVAVNAGQIKTGAPARSERVAKYNQLLRIEEELGETAEYRGLNTF
type: DOMAIN
name: Enolase_C
description: Enolase, C-terminal TIM barrel domain

phrase: ILIKLNQIGTLTE
type: CONSERVED_SITE
name: Enolase_CS
description: Enolase, conserved site

phrase: AKVLPVPMMNIVNGGKHADNNVDLQEFMIMPVGAPSFTEALRMSSEVYHTLKSLLKSKGQDTGVGDEGGFAPNLNSNEEAIQIIVEAVEKAGYVPGKDIFIALDPASTEIYEDGKYNLKSEGKVLSSEEMVDYYVTLVNKYPIISIEDAMAEEDWEGWSILTEKLGDKVQLVGDDLFVTNTERLKKGIDKKVANSILIKLNQIGTLTETLNAIEMAERAGYTAVVSHRSGETEDTTIADLVVAVNAGQIKTGAPARSERVAKYNQLLRIEEELGETAEYRGLNTFY
type: DOMAIN
name: Enolase_C
description: Enolase, C-terminal TIM barrel domain

phrase: IVDVTARQILDSRANPTVEVEVILEDGTEGRAAVPSGASTGAFEAVELRDEDKEKYMGKGVLKAVENVNNYIAEELIGMNVFDQVLIDKTMLELDGTHNKGKLGANATLGVSLACARAAAKYLGLSLYQY
type: DOMAIN
name: Enolase_N
description: Enolase, N-terminal
Protein sequence:
MKPMHIAMALLSAAMFFVLAGVFMGVQLELDGTKLVVDTASDVRWQWVFIGTAVVFFFQLLRPAFQKGLKSVSGPKFILPAIDGSTVKQKLFLVALLVLAVAWPFMVSRGTVDIATLTMIYIILGLGLNVVVGLSGLLVLGYGGFYAIGAYTFALLNHYYGLGFWTCLPIAGLMAAAAGFLLGFPVLRLRGDYLAIVTLGFGEIVRILLLNNTEITGGPNGISQIPKPTLFGLEFSRTAREGGWDTFSNFFGLKYDPSDRVIFLYLVALLLVVLSLFVINRLLRMPLGRAWEALREDEIACRSLGLSPRRIKLTAFTISAAFAGFAGTLFAARQGFVSPESFTFAESAFVLAIVVLGGMGSQFAVILAAILLVVSRELMRDFNEYSMLMLGGLMVLMMIWRPQGLLPMTRPQLKLKNGAAKGEQA

Annotated regions:
phrase: IAMALLSAAMFFVLAGVFMGVQLELDGTKLVVDTASDVRWQWVFIGTAVVFFFQLLRPAFQKGLKSVSGPKFILPAIDGSTVKQKLFLVALLVLAVA
type: DOMAIN
name: LivHM_N
description: High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal
Protein sequence:
MSGTLARSVMVLGTTSGAGKSWLTTALCRYYARQGLKVAPFKAQNMSNNARVVAGGEIGSAQYFQALAARAEPDVRMNPLLLKPEKDTQSQVILMGQVDAELSRMPWRGRSASVWPVIARALDELLAENDVVVIEGAGSPAEINLKSSDIVNMRVAQHTGASCLLVTDIDRGGAFAHLYGTWAMLDEAERQLIKGFVLNKFRGDASLLAPGPQMLQEMTGVPTVATLPMWWQHGLPEEDGVFDMAPTLGTGVSTLPPEGAELARGGPSLRSPRPVIAVIAYPRISNLDEFQPLKNVPGVHLKWVRSPGELAGVDWIILPGSKHTSGDLAWLRAQGLDRAVAAHAEQGGAVLGVCGGLQMLGEALIDPHGIDGNAPGLGLLPVVTVFEEGKTVQRRQARFGELAGAWAALSGVGLQGYEIHHGQTAPHTAMAAAGDIAHGVMAEGLAWQNTRGNVLGLYLHGMFEDPAVLQALFGATVPTLDAVFDGLADYIEQHFEPGVLQSLIATP

Annotated regions:
phrase: RSVMVLGTTSGAGKSWLTTALCRYYARQGLKVAPFKAQNMSNNARVVAGGEIGSAQYFQALAARAEPDVRMNPLLLKPEKDTQSQVILMGQVDAELSRMPWRGRSASVWPVIARALDELLAENDVVVIEGAGSPAEINLKSSDIVNMRVAQHTGASCLLVTDIDRGGAFAHLYGTWAMLDEAERQLIKGFVLNKFRGDASLLAPGPQMLQEMTGVPTVATL
type: DOMAIN
name: CobQ_N
description: Cobyric acid synthase, N-terminal domain

phrase: IAVIAYPRISNLDEFQPLKNVPGVHLKWVRSPGELAGVDWIILPGSKHTSGDLAWLRAQGLDRAVAAHAEQGGAVLGVCGGLQMLGEALIDPHGIDGNAPGLGLLPVVTVFEEGKTVQRRQARFGELAGAWAALSGVGLQGYEIHHGQTAPHTAMAAAGDIAHGVMAEGLAWQNTRGNVLGLYLHGMFED
type: DOMAIN
name: GATase_3
description: CobB/CobQ-like glutamine amidotransferase

phrase: IAVIAYPRISNLDEFQPLKNVPGVHLKWVRSPGELAGVDWIILPGSKHTSGDLAWLRAQGLDRAVAAHAEQGGAVLGVCGGLQMLGEALIDPHGIDGNAPGLGLLPVVTVFEEGKTVQRRQARFGELAGAWAALSGVGLQGYEIHHGQTAPHTAMAAAGDIAHGVMAEGLAWQNTRGNVLGLYLHGMFEDPAVLQAL
type: DOMAIN
name: CobQ_GATase1
description: Cobyric acid synthase, glutamine amidotransferase type 1

phrase: VMVLGTTSGAGKSWLTTALCRYYARQGLKVAPFKAQNMSNNARVVAGGEIGSAQYFQALAARAEPDVRMNPLLLKPEKDTQSQVILMGQVDAELSRMPWRGRSASVWPVIARALDELLAENDVVVIEGAGSPAEINLKSSDIVNMRVAQHTGASCLLVTDIDRGGAFAHLYGTWAMLDEAERQLIKGFVLNKFRGDASLLAPGPQMLQEMTGVPTVATL
type: DOMAIN
name: CobQ/CobB/MinD/ParA_Nub-bd_dom
description: CobQ/CobB/MinD/ParA nucleotide binding domain
Protein sequence:
MSAPARPAPAAPIRVAAGTTAGQAVRDAGLPSRGAPDAVVVVQDPDGRLRDLSWVPDADVDVIPVTADTEDGRSVIRHSAAHVLAQAVQALFPDAKLGIGPPITDGFYYDFEVAEPFTPEDLEALEKRMRQIVKDGQLFSRRVFESKDEAREELANEPYKLELIDDKSGDLESSDEIMEIGGDELTAYDNLNPRTRERVWGDLCRGPHIPTTRYIPAFKLTRSSAAYWRGDQNNASLQRIYGTAWESQEALDRHLELIEEAQKRDHRKLGVELDLFSFPDELGSGLPVFHPKGGVVRRELEEYSRRKHIEAGYEFVNTPHITKEHLYITSGHLEWYADGMFPAMHIDAEYNDDGTVRKPGQDYYLKPMNCPMHHLIYRSRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYCTREEMRDELARLLQFVLDLLADYGLDDFYLELSTKDPDKFVGSDDMWEEATETLREVAESSGLHLVPDPGGAAFYGPKISVQVRDALGRNWQMSTIQLDFNMPDRFELEYTAADGTRKRPVLIHRALFGSIERFFGVLTEHYAGAFPAWLAPVQVVGIPVADDHIRYLDGLVAQLRALGIRAEVDTSDDRMAKKIVNHTNQKVPFMLLAGDRDVEAEAVSFRFGDRTQVNGVPREQAVAAIVDWVTRRENATPTAELVEISAETGEG

Annotated regions:
phrase: LTAYDNLNPRTRERVWGDLCRGPHIPTTRYIPAFKLTRSSAAYWRGDQNNASLQRI
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD

phrase: DHRKLGVELDLFSFPDELGSGLPVFHPKGGVVRRELEEYSRRKHIEAGYEFVNTPHITKEHLYITSGHLEWYADGMFPAMHIDAEYNDDGTVRKPGQDYYLKPMNCPMHHLIYRSRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYCTREEMRDELARLLQFVLDLLADYGLDDFYLELSTKDPDKFVGSDDMWEEATETLREVAESSGLHLVPDPGGAAFYGPKISVQVRDALGRNWQMSTIQLDFNMPDRFELEYTAADGTRKRPVLIHRALFGSIERFFGVLTEHYAGAFPAWLA
type: DOMAIN
name: ThrRS_core
description: Threonine-tRNA ligase catalytic core domain

phrase: DRHLELIEEAQKRDHRKLGVELDLFSFPDELGSGLPVFHPKGGVVRRELEEYSRRKHIEAGYEFVNTPHITKEHLYITSGHLEWYADGMFPAMHIDAEYNDDGTVRKPGQDYYLKPMNCPMHHLIYRSRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYCTREEMRDELARLLQFVLDLLADYGLDDFYLELSTKDPDKFVGSDDMWEEATETLREVAESSGLHLVPDPGGAAFYGPKISVQVRDALGRNWQMSTIQLDFNMPDRFELEYTAADGTRKRPVLIHRALFGSIERFFGVLTEHYAGAF
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: GQDYYLKPMNCPMHHLIYRSRGRSYRELPLRLFEFGSVYRYEKSGVVHGLTRVRGMTQDDAHIYCTREEMRDELARLLQFVLDLLADYGLDDFYLELSTKDPDKFVGSDDMWEEATETLREVAESSGLHLVPDPGGAAFYGPKISVQVRDALGRNWQMSTIQLDFNMPDRFELEYTAADGTRKRPVLIHRALFGSIERFFGVLTEH
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: MSAPARPAPAAPIRVAAGTTAGQAVRDAGLPSRGAPDAVVVVQDPDGRLRDLSWVPDADVDVIPV
type: DOMAIN
name: TGS
description: TGS

phrase: QVVGIPVADDHIRYLDGLVAQLRALGIRAEVDTSDDRMAKKIVNHTNQKVPFMLLAGDRDVEAEAVSFRFGDRTQVNGVPREQAVAAI
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: PVQVVGIPVADDHIRYLDGLVAQLRALGIRAEVDTSDDRMAKKIVNHTNQKVPFMLLAGDRDVEAEAVSFRFGDRTQVNGVPREQAVAAI
type: DOMAIN
name: ThrRS_anticodon
description: Threonine-tRNA ligase, class IIa, anticodon-binding domain

phrase: VWGDLCRGPHIPTTRYIPAFKLTRSSAAYWRGDQNNASLQRI
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD
Protein sequence:
MKSERQQKILEIIQNEDIETQEELVERLKALGYDVTQATVSRDIKELRLTKVLTETGKYKYAVLSGPEANITEKLIKVFSESIVKYDTADNLVIIKTITGAAQGAAAAIDSLSWPEVVGTIAGDDTIFIATKGSAAADKIVERIKAIISQGE

Annotated regions:
phrase: FSESIVKYDTADNLVIIKTITGAAQGAAAAIDSLSWPEVVGTIAGDDTIFIATKGSAAADKIVERI
type: DOMAIN
name: Arg_repress_C
description: Arginine repressor, C-terminal

phrase: KSERQQKILEIIQNEDIETQEELVERLKALGYDVTQATVSRDIKELRLTKVLTETGKYKYAV
type: DOMAIN
name: Arg_repress_DNA-bd
description: Arginine repressor, DNA-binding domain
Protein sequence:
MINQLSALLKTAGISLSDRQKQQLVGYVEMLHKWNKAYNLTSVRDPQQMLVRHILDSIVVEPHLIGERFIDVGTGPGLPGVPLAIVRPGAHFTLLDSLGKRVRFLKQVQHELKLDNITPVQSRVEEFAGEPPFDGVISRAFASLNDMVSWCHHLPGQQGRFYALKGVLPEEEIAALPAGFRVENISPLIVPQLEGERHLVVIARH

Annotated regions:
Protein sequence:
MTSKTVTRADLASVVCRKVGLSHTESAALVELVLNEICNSLVRGEAVKLSSFATFQVRKKNERVGRNPKTGVEAPILPRRVVTFKAANVLKQRILDSHRARQKIISHE

Annotated regions:
phrase: SFATFQVRKKNERVGRNPK
type: CONSERVED_SITE
name: Histone-like_DNA-bd_CS
description: Histone-like DNA-binding protein, conserved site
Protein sequence:
MACAEQDKLGQAFEDAFEVLRQHSTGDFQYSSDYKNYLAFINHRSHIRGNSNSYGVQPAEEPIYNWRTVINSATDLYFEGNIHQSLQNIPENQLVQPALLQQKGGKGRKKLRLFEYLHESLCNPEMASCIQWIDQTKGIFQFVSKNKEKLAQLWGKRKGNRKTMTYQKMARALRNYGRTGEIIKIRRKLTYQFSEAILQRLSAPYFLEKEIFYSQYVQPDQGYLSLNNWNANYNYTYANYHELSHPDC

Annotated regions:
phrase: LRLFEYLHESLCN
type: DOMAIN
name: Ets_dom
description: Ets domain

phrase: GIFQFVSKNKEKLAQLWG
type: DOMAIN
name: Ets_dom
description: Ets domain

phrase: KGNRKTMTYQKMARALRN
type: DOMAIN
name: Ets_dom
description: Ets domain

phrase: YGRTGEIIKIRRKLTYQF
type: DOMAIN
name: Ets_dom
description: Ets domain

phrase: KLRLFEYLHESLCNPEMASCIQWIDQTKGIFQFVSKNKEKLAQLWGKRKGNRKTMTYQKMARALRNYGRTGEIIKIRRKLTYQFSEAI
type: DOMAIN
name: Ets_dom
description: Ets domain

phrase: LRLFEYLHESLCNPEMASCIQWIDQTKGIFQFVSKNKEKLAQLWGKRKGNRKTMTYQKMARALRNYGRTGEIIKIRRKLTYQF
type: DOMAIN
name: Ets_dom
description: Ets domain

phrase: RKTMTYQKMARALRN
type: DOMAIN
name: Ets_dom
description: Ets domain

phrase: RLFEYLHESLCNPEMASCIQWIDQTKGIFQFVSKNKEKLAQLWGKRKGNRKTMTYQKMARALRNYGRTGEIIKIRRKLTYQF
type: DOMAIN
name: Ets_dom
description: Ets domain
Protein sequence:
MSQSALHTEFGDIAGLRAALAERRVSAVELAESGLAAAQAAAGLNAFLHIDPELTLVQARAADAALAAGTAGPLAGIPIAHKDAFVTRGWRSTAGSKMLRDYLSPFDATVVERLQAAGAVSLGKLNCDEFAMGSGNENSAFGPARNPWDLAAVPGGSSGGSAAAVAARLVAGATGTDTGGSVRQPAALCGVSGIKPTYGTVSRYGMIAFGSSLDQAGPLAPSSRDLLELLDVMSGFDPRDATSLERCDDAANAPGRIRAAFDAAQNGYQAAGSQPLKGLRIGVPAEFFGAGLTPDVAAAVEAALRQFEALGAERVAISLPRTELAIPAYYVIAPAEASSNLARFDGVRYGHRAAEYSDLNEMISRSRAEGFGDEVKRRILIGAYVLSHGYYDAYYLQAQRLRRLIAQDFQRAFAGQCDVIMGPVAPSVAKNIGENRDDPTADWLADVYTLGVSLAGLPAMSVPCGFGAAGRPVGLQIIGNYFDEGRLLAIADRYQQVTDWHQRTPATQDA

Annotated regions:
phrase: AAAQAAAGLNAFLHIDPELTLVQARAADAALAAGTAGPLAGIPIAHKDAFVTRGWRSTAGSKMLRDYLSPFDATVVERLQAAGAVSLGKLNCDEFAMGSGNENSAFGPARNPWDLAAVPGGSSGGSAAAVAARLVAGATGTDTGGSVRQPAALCGVSGIKPTYGTVSRYGMIAFGSSLDQAGPLAPSSRDLLELLDVMSGFDPRDATSLERCDDAANAPGRIRAAFDAAQNGYQAAGSQPLKGLRIGVPAEFFGAGLTPDVAAAVEAALRQFEALGAERVAISLPRTELAIPAYYVIAPAEASSNLARFDGVRYGHRAAEYSDLNEMISRSRAEGFGDEVKRRILIGAYVLSHGYYDAYYLQAQRLRRLIAQDFQRAFAGQCDVIMGPVAPSVAKNIGENRDDPTADWLADVYTLGVSLAGLPAMSVPCGFGAAGRPVGLQIIGNYFDEGRL
type: DOMAIN
name: Amidase_dom
description: Amidase signature domain

phrase: GGSSGGSAAAVAARLVAGATGTDTGGSVRQP
type: CONSERVED_SITE
name: Amidase_CS
description: Amidase, conserved site
Protein sequence:
MMMMGEGVSSVPPWSHLPVSGVDVLGGGGGGGDEMTPYVIAALRDYLPANDVGVGADEEEEAAAMAAAVDAYACDEFRMYEFKVRRCARGRSHDWTECPFAHPGEKARRRDPRKYHYSGTACPDFRKGGCKRGDACEYAHGVFECWLHPARYRTQPCKDGTACRRRVCFFAHTPDQLRVLPAQQSSPRSVASSPLAESYDGSPLRRQAFESYLTKTIMSSSPTSTLMSPPKSPPSESPPLSPDGAAAIRRGSWPGVGSPVNDVLASFRQLRLNKVKSSPSGGWSYPSSSAVYGSPKAATGLYSLPTTPLASTATVTTASSFMPNLEPLDLGLIGDEEPVQRVESGRALREKVFERLSRDGAISGDATAFATAGVGLDVDWVSDLIN

Annotated regions:
phrase: TACPDFRKGGCKRGDACEYAH
type: DOMAIN
name: Znf_CCCH
description: Zinc finger, CCCH-type

phrase: HYSGTACPDFRKGGCKRGDACEYAHG
type: DOMAIN
name: Znf_CCCH
description: Zinc finger, CCCH-type

phrase: RYRTQPCKDGTACRRRVCFFAHT
type: DOMAIN
name: Znf_CCCH
description: Zinc finger, CCCH-type

phrase: YSGTACPDFRKGGCKRGDACEYAHGV
type: DOMAIN
name: Znf_CCCH
description: Zinc finger, CCCH-type
Protein sequence:
MQNNQFPHFSDEVGDRNMHNPYASGSSYDALFPPCAKLPYHGVELQPSAVCPKNFVIFDQTYDRSQVMYHPELTHKLMNTPSLNNLASTFQNEYVGGSYGNYGNYEQEVSSSYQEDPNEIDALLSADEDYEENDDNEGEEDGGDSEEVSTARTSSRDYGNTTAESCCSSYGYNNNNNNNSRKQSLSGSASSSNNDGKGRKKMKKMMGVLRRIVPGGEQMNTACVLDEAVQYLKSLKIEAQKLGVGHFSNQS

Annotated regions:
phrase: SGSASSSNNDGKGRKKMKKMMGVLRRIVPGGEQMNTACVLDEAVQYLKS
type: DOMAIN
name: bHLH_dom
description: Myc-type, basic helix-loop-helix (bHLH) domain
Protein sequence:
MAMARLTPNGVAAALAGDTNLKPVLQIVELRGVQVNGAGVTRGERFRAVVSDGTAASSALFAAQLSDHARSGALRRGSIVQLSEYVINEVGPRRIIVILNLEVLVSECEIIGNPTALSETGSPIPNPTRVEQFNGAPQYGLMAGNSSNTTTKPSDNVPLFQNSMAGNSSNFATRPSDKVPVFQPTVQPSYRPAPNYKNHGAIMKNEAPARIIPISALNPYQGRWAIKARVTAKGDIRRYHNAKGDGKVFSFDLLDSDGGEIRVTCFNALLDRFYEVVEVGKVYVVSRGNLRPAQKNYNHLNNEWEILLENGSTVDLCPDENSSIPTQRFDFRPINEIEDAQNNAILDIIGVVTSVNPCTTIQRKNGMETQKRTMNLKDMSGRSVEVTMWGDFCNREGSQLQGMVERGIFPVLAVKAGKVSDFSGKSVGTISSTQLFINPDSAEAHSLRQWFDSGGRDASTQSISRDITPGASRNEIRKTVAQIKDEGLGMGDKPDWITVKATVIFFKNESFFYTACPNMIGDRQCNKKVTKSTNGNWTCDKCDREFEECDYRYLLQFQIQDHSGTAWVTAFQEAGQELLGCSATELNALKEREDPRFADTMLNCLFQEYLLRLKVKEESYGDERKVKNTAVKVEKVDPSGESKFLLDLISKSSALH

Annotated regions:
phrase: VAQIKDEGLGMGDKPDWITVKATVIFFKNESFFYTACPNMIGDRQCNKKVTKSTNGNWTCDKCDREFEECDYRYLLQFQIQDHSGTAWVTAFQEAGQELLGCSATELNALKEREDPRFADTMLNCLFQEYLLRLKVKEESYGDERKVKNTAVKVEKVDPSGESKFLLDLIS
type: DOMAIN
name: Euk_RPA1_DBD_C
description: Replication factor A, C-terminal, eukaryotes

phrase: LTPNGVAAALAGDTNLKPVLQIVELRGVQVNGAGVTRGERFRAVVSDGTAASSALFAAQLSDHARSGALRRGSIVQLSEYVINEVGPRRIIVILNLEVLV
type: DOMAIN
name: Rep_factor-A_N
description: Replication factor-A protein 1, N-terminal

phrase: GVAAALAGDTNLKPVLQIVELRGVQVNGAGVTRGERFRAVVSDGTAASSALFAAQLSDHARSGALRRGSIVQLSEYVINEVGPRRIIVILNLEVL
type: DOMAIN
name: Rep_factor-A_N
description: Replication factor-A protein 1, N-terminal

phrase: INEIEDAQNNAILDIIGVVTSVNPCTTIQRKNGMETQKRTMNLKDMSGRSVEVTMWGDFCNREGSQLQGMVERGIFPVLAVKAGKVSDFSGKSVGTISSTQLFI
type: DOMAIN
name: REPA_OB_2
description: Replication protein A, OB domain

phrase: WITVKATVIFFKNESFFYTACPNMIGDRQCNKKVTKSTNGNWTCDKCDREFEECDYRYLLQFQIQDHSGTAWVTAFQEAGQELLGCSATELNALKEREDPRFADTMLNCLFQEYLLRLKVKEESYGDERKVKNTAVKVEKVDPSGESKF
type: DOMAIN
name: Rep_factor-A_C
description: Replication factor A, C-terminal

phrase: IKARVTAKGDIRRYHNAKGDGKVFSFDLLDSDGGEIRVTCFNALLDRFYEVVEVGKVYVVSRGNLRPAQKNYNHLNNEWEI
type: DOMAIN
name: NA-bd_OB_tRNA
description: OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
Protein sequence:
MFASRFDPSQLTAPAASAPEGIVGTTPPAIVPLKRQATESDNEEYGSHQDSDESSNSSSEEDEDRMQVDYGASEEDSSEVEEEESKPSTHSTVLSRFKQTVSLQERLGASDIAESKEDESIEDEAASTHQLKQIPQPEFVKNPMNLNTNSLQFKSTGWLNTEKIYYDNSLIKPFSDYANELEAKLLQNICKNFSTNTFPIQSIILDSILPVLNFTLNVSKRNFTRRIGDILVNAATGSGKTLAYSIPIVQTLFKRQINRLRCIIIVPTKLLINQVYTTLTKLTQGTSLIVSIAKLENSLKDEHKKLSNLEPDILITTPGRLVDHLNMKSINLKNLKFLIIDEADRLLNQSFQGWCPKLMSHLKTDKLDTLPGNVIKMIFSATLTTNTEKLNGLNLYKPKLFLKQTDKLYQLPNKLNEFNINIPTAKSIYKPLILLYSICQFMAHSPIAAKILIFVKSNESSIRLSKLLQLICESRSQSSVLKNLQNLAVSINSVNSNNSKAENKKIVANFSHPSESAGITILITTDIMSRGIDINDITQVINYDPPMSSQQYVHRVGRTARANELGSAYNLLVGRGERTFFDDLNKDLDRDGKSVQPLELDFTLLESDSELYTSSLESLKNYHNNTAQA

Annotated regions:
phrase: SICQFMAHSPIAAKILIFVKSNESSIRLSKLLQLICESRSQSSVLKNLQNLAVSINSVNSNNSKAENKKIVANFSHPSESAGITILITTDIMSRGIDINDITQVINYDPPMSSQQYVHRVGRTARANELGSAYNLLVGRGERTFFDDLNKDLDRDGKSVQPLELDF
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: SSVLKNLQNLAVSINSVNSNNSKAENKKIVANFSHPSESAGITILITTDIMSRGIDINDITQVINYDPPMSSQQYVHRVGRTARA
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: DILVNAATGSGKTLAYSIPIVQTLFKRQINRLRCIIIVPTKLLINQVYTTLTKLTQGTSLIVSIAKLENSLKDEHKKLSNLEPDILITTPGRLVDHLNMKSINLKNLKFLIIDEADRLLNQSFQGWCPKLMSHLKTDKLDTLPGNVIKMIFSATLTTNTE
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: FSTNTFPIQSIILDSILPVLNFTLNVSKRNFTRRIGDILVNAATGSGKTLAYSIPIVQTLFKRQINRLRCIIIVPTKLLINQVYTTLTKLTQGTSLIVSIAKLENSLKDEHKKLSNLEPDILITTPGRLVDHLNMKSINLKNLKFLIIDEADRLLNQSFQGWCPKLMSHLKTDKLDTLPGNVIKMIFSATLTTNTEKLNGLNLYKPKLFLKQTDKLYQLPNKLNE
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: AAKILIFVKSNESSIRLSKLLQLICESRSQSSVLKNLQNLAVSINSVNSNNSKAENKKIVANFSHPSESAGITILITTDIMSRGIDINDITQVINYDPPMSSQQYVHRVGRTARA
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: IIDEADRL
type: CONSERVED_SITE
name: RNA-helicase_DEAD-box_CS
description: ATP-dependent RNA helicase DEAD-box, conserved site

phrase: RNFTRRIGDILVNAATGSGKTLAYSIPIVQTLFKRQINRLRCIIIVPTKLLINQVYTTLTKLTQGTSLIVSIAKLENSLKDEHKKLSNLEPDILITTPGRLVDHLNMKSINLKNLKFLIIDEADRLLNQSFQGWCPKLMSHLKTDKLDTLPGNVIKMIFSATLTTNTEKLNGLNLYKPKL
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain
Protein sequence:
MIDKRDFKAFKLVSKYAPSGDQPQAIETLVDNIEGGEKAQILLGATGTGKTYTMSQVISKVNKPTLVVAHNKTLAGQLYGEFKEFFPENAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSVNDEIDKLRHSATSSLLERNDVIVVASVSCIYGLGSPKEYADSAVSLRPGQEISRDQLLNALVDIQFERNDIDFQRGRFRVRGDVVEVFPASRDEHAFRIEFFGDEIDRIREIESLTGKVLGDADHLVLFPATHFVTNDEHMEQSISKIQAELADQLKLFEAEGKLLEAQRLRQRTEYDIEMLREMGYTNGVENYSRHMDGRSAGEPPYTLLDFFPDDFLIMIDESHMTMGQIKGMYNGDKARKQMLVDYGFRLPSALDNRPLRREEFESHVHQIVYVSATPGDYEMEQTDTIVEQIIRPTGLLDPEVEVRPSMGQMDDLLGEINLRVERGERTFITTLTKKMAEDLTDYLKEMGVKVKYMHSDIKTLERTEIIRDLRLGVFDVLIGINLLREGIDVPEVSLVAILDADKEGFLRNERGLIQTIGRAARNADGHVIMYADRMTDSMQRAIDETARRRAIQMAYNEEHGIIPQTIKKDIRDLISISRAVEAKATEAETNYESMTRSERQEAIKQLQKNMQEAAELLDFELAAQLRDLILELKAMD

Annotated regions:
phrase: SKYAPSGDQPQAIETLVDNIEGGEKAQILLGATGTGKTYTMSQVISKVNKPTLVVAHNKTLAGQLYGEFKEFFPENAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSVNDEIDKLRHSATSSLLERNDVIVVASVSCIYGLGSPKEYADSAVSLRPGQEISRDQLLNALVDIQFERNDIDFQRGRFRVRGDVVEVFPASRDEHAFRIEFFGDEIDRIREIESLTGKVLGDADHLVLFPATHFVTNDEHMEQSISKIQAELADQLKLFEAEGKLLEAQRLRQRTEYDIEMLREMGYTNGVENYSRHMDGRSAGEPPYTLLDFFPDDFLIMIDESHMTMGQIKGMYNGDKARKQMLVDYGFRLPSALDNRPLRREEFESHVHQIVYVSATPGDYEMEQTDTIVEQIIRPTGLLDPEVEV
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: EDLTDYLKEMGVKVKYMHSDIKTLERTEIIRDLRLGVFDVLIGINLLREGIDVPEVSLVAILDADKEGFLRNERGLIQTIGRAARN
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: GDQPQAIETLVDNIEGGEKAQILLGATGTGKTYTMSQVISKVNKPTLVVAHNKTLAGQLYGEFKEFFPENAVEYFVSYYDYYQPEAYVPSSDTYIEKDS
type: DOMAIN
name: Helicase/UvrB_N
description: Helicase/UvrB, N-terminal

phrase: QMDDLLGEINLRVERGERTFITTLTKKMAEDLTDYLKEMGVKVKYMHSDIKTLERTEIIRDLRLGVFDVLIGINLLREGIDVPEVSLVAILDADKEGFLRNERGLIQTIGRAARNADGHVIMYADRMTDSMQRAIDETARRRAIQMAYNEEHGIIPQTIKKDIRDL
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: LGEINLRVERGERTFITTLTKKMAEDLTDYLKEMGVKVKYMHSDIKTLERTEIIRDLRLGVFDVLIGINLLREGIDVPEVSLVAILDADKEGFLRNERGLIQTIGRAAR
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: MYADRMTDSMQRAIDETARRRAIQMAYNEEHGIIPQTIKKDI
type: DOMAIN
name: UvrB_YAD/RRR_dom
description: UvrB, YAD/RRR-motif-containing domain

phrase: EAIKQLQKNMQEAAELLDFELAAQLRDLILELK
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: DNIEGGEKAQILLGATGTGKTYTMSQVISKVNKPTLVVAHNKTLAGQLYGEFKEFFPENAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSVNDEIDKLRHSATSSLLERNDVIVVASVSCIYGLGSPKEYADSAVSLRPGQEISRDQLLNALVDIQFERNDIDFQRGRFRVRGDVVEVFPASRDEHAFRIEFFGDEIDRIREIESLTGKVLGDADHLVLFPATHFVTNDEHMEQSISKIQA
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: VSLRPGQEISRDQLLNALVDIQFERNDIDFQRGRFRVRGDVVEVFPASRDEHAFRIEFFGDEIDRIREIESLTGKVLGDADHLVLFPATH
type: DOMAIN
name: UvrB_inter
description: UvrB, interaction domain

phrase: QEAIKQLQKNMQEAAELLDFELAAQLRDLILELKA
type: DOMAIN
name: UVR_dom
description: UVR domain
Protein sequence:
MGTPSDRVPLAERVEELLAVGGPLPIVAAGDPVLRRAAEPYDGQVAPALFERFVEALRLTMHAAPGVGLAAPQVGVGLRVAVIEDPAPVPDEVRVARGRVPQPFRVLVNPSYEPAGAGRAAFFEGCLSVPGWQAVVARHAEVRLRAHDEHGRAVDEVFAGWPARIVQHETDHLDGTLYLDRAELRSLASNAAMAELWSQPTPRRAASALGFELPGPAA

Annotated regions:
Protein sequence:
MKNIKKNQVMNLGPNSKLLKEYKSQLIELNIEQFEAGIGLILGDAYIRSRDEGKTYCMQFEWKNKAYMDHVCLLYDQWVLSPPHKKERVNHLGNLVITWGAQTFKHQAFNKLANLFIVNNKKTIPNNLVENYLTPMSLAYWFMDDGGKWDYNKNSTNKSIVLNTQSFTFEEVEYLVKGLRNKFQLNCYVKINKNKPIIYIDSMSYLIFYNLIKPYLIPQMMYKLPNTISSETFLK

Annotated regions:
phrase: EAGIGLILGDAYIRSRDEGKTYCMQFEWKNKAYMDHVCLLYDQWVLSPPHKKERVNHLGNLVITWGAQTFKHQAFNKLANLFIVNNKKTIPNNLVENYLTPMSLAYWFMDDGGKWDYNKNSTNKSIVLNTQSFTFEEVEYLVKGLRNKFQLNCYVKINKNKPIIYIDSMSYLI
type: DOMAIN
name: LAGLIDADG_dom
description: Homing endonuclease, LAGLIDADG domain
Protein sequence:
MRAFLDLNSEEIVAWLKENNEKSFRLKQINEWIFKHGELDFNKMTNLPVRLREKLKENFLLPSLKIIHSKKSRDGQSIKYLLKLKDNLGIEAVLLKYRYGNTVCLSTQVGCKMGCKFCATGLGGFSRNLTAGEMIEQILVLKASSSEKITRVVLMGSGEPLDNFTEVLKFMRKINEKDCLNISYRKITVSTCGMVPQIKALAEEKLPVTLAISLHAPDDALRNELIPINKRWGLAELLDAAWYFIDKTGRRVSFEYALIENVNDTVEHALKLAQLLQRKLVHVNLIPYNTIEKRNFKTPSVEKINKFKEVLKRAGIPVTVRRELGDEIDGACGQLKAKYFEV

Annotated regions:
phrase: STQVGCKMGCKFCATGLGGFSRNLTAGEMIEQILVLKASSSEKITRVVLMGSGEPLDNFTEVLKFMRKINEKDCLNISYRKITVSTCGMVPQIKALAEEKLPVTLAISLHAPDDALRNELIPINKRWGLAELLDAAWYFIDKTGRRVSFEYALIENVNDTVEHALK
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LDLNSEEIVAWLKENNEKSFRLKQINEWIFKHGELDFNKMTNLPVRLREKLKEN
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: YRYGNTVCLSTQVGCKMGCKFCATGLGGFSRNLTAGEMIEQILVLKASSSEKITRVVLMGSGEPLDNFTEVLKFMRKINEKDCLNISYRKITVSTCGMVPQIKALAEEKLPVTLAISLHAPDDALRNELIPINKRWGLAELLDAAWYFIDKTGRRVSFEYALIENVNDTVEHALKLAQLLQRKLVHVNLIPYNTIEKRNFKTPSVEKINKFKEVLKRAGIPVTVRRELGD
type: DOMAIN
name: rSAM
description: Radical SAM