nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MRNDPFQRLGLDREVLTVSQLNQRARLLLEDVFPQVWVEGELSNLARPASGHVYFTLKDSNAQIRCALFRQNALRVRQALRDGLAVKVRGKISLFEGRGDYQLIADTVEPAGDGALRLAFEALKEKLAGEGLFASERKRPLPAHPRRIGIVSSPSGAVIRDIISVFRRRAPQVELTLVPTAVQGREAVAQIVRALQLADRQGFDALILARGGGSLEDLWCFNEEAVARAVAACATPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPNAGDLQQRLDGLRRRLVLRMRDQLLRERLRLEGVARRLRHPGERLRQQAQRLDDLDMRLRRAFERHLAVRHERLVRLETRLAAQHPGRTLALLRQKLDSLAARLPRAAREVLKDRRQHLEGLAQTLNVVSPLATLGRGYSILLDERGRAIRDAGQTQPGQRLKARLAEGELEVRVEDNHRTPVTLSLLD

Annotated regions:
phrase: LFASERKRPLPAHPRRIGIVSSPSGAVIRDIISVFRRRAPQVELTLVPTAVQGREAVAQIVRALQLADRQGFDALILARGGGSLEDLWCFNEEAVARAVAACATPIVSAVGHETDVSISDFVADVRAPTPSAAAELLAPNAGDLQQRLDGLRRRLVLRMRDQLLRERLRLEGVARRLRHPGERLRQQAQRLDDLDMRLRRAFERHLAVRHERLVRLETRLAAQHPGRTLALLRQKLDSLAARLPRAAREVLKDRRQHLEGLAQTLNVVSPLATLGRGYSILLDERGRAIRDAGQTQPGQRLKARLAEGELE
type: DOMAIN
name: Exonuc_VII_lsu_C
description: Exonuclease VII, large subunit, C-terminal

phrase: QVWVEGELSNLARPASGHVYFTLKDSNAQIRCALFRQNALRVRQALRDGLAVKVRGKISLFEGRGDYQLIADTVEPA
type: DOMAIN
name: OB-fold_nuc-bd_dom
description: OB-fold nucleic acid binding domain

phrase: LTVSQLNQRARLLLEDVFPQVWVEGELSNLARPASGHVYFTLKDSNAQIRCALFRQNALRVRQALRDGLAVKVRGKISLFEGRGDYQLIADT
type: DOMAIN
name: OB-fold_nuc-bd_dom
description: OB-fold nucleic acid binding domain
Protein sequence:
MPMGSLQPLATLYLLGMLVASCLGRLSWYDPDFQARLTRSNSKCQGQLEVYLKDGWHMVCSQSWGRSSKQWEDPSQASKVCQRLNCGVPLSLGPFLVTYTPQSSIICYGQLGSFSNCSHSRNDMCHSLGLTCLEPQKTTPPTTRPPPTTTPEPTAPPRLQLVAQSGGQHCAGVVEFYSGSLGGTISYEAQDKTQDLENFLCNNLQCGSFLKHLPETEAGRAQDPGEPREHQPLPIQWKIQNSSCTSLEHCFRKIKPQKSGRVLALLCSGFQPKVQSRLVGGSSICEGTVEVRQGAQWAALCDSSSARSSLRWEEVCREQQCGSVNSYRVLDAGDPTSRGLFCPHQKLSQCHELWERNSYCKKVFVTCQDPNPAGLAAGTVASIILALVLLVVLLVVCGPLAYKKLVKKFRQKKQRQWIGPTGMNQNMSFHRNHTATVRSHAENPTASHVDNEYSQPPRNSHLSAYPALEGALHRSSMQPDNSSDSDYDLHGAQRL

Annotated regions:
phrase: SNSKCQGQLEVYLKDGWHMVCSQSWGRSSKQWEDPSQASKVCQRLNCGVPLSLGPFLVTYTPQSSIICYGQLGSFSNCSHSRNDMCH
type: DOMAIN
name: SRCR
description: SRCR domain

phrase: ARLTRSNSKCQGQLEVYLKDGWHMVCSQSWGRSSKQWEDPSQASKVCQRLNCGVPLSLGPFLVTYTPQSSIICYGQLGSFSNCSHSRNDMCHSLGLTC
type: DOMAIN
name: SRCR
description: SRCR domain

phrase: LQLVAQSGGQHCAGVVEFYSGSLGGTISYEAQDKTQDLENFLCNNLQCGSFLKHLPETEAGRAQDPGEPREHQPLPIQWKIQNSSCTSLEHCFRKIKPQKSGRVLALLC
type: DOMAIN
name: SRCR
description: SRCR domain

phrase: SRLVGGSSICEGTVEVRQGAQWAALCDSSSARSSLRWEEVCREQQCGSVNSYRVLDAGDPTSRGLFCPHQKLSQCHELWERNSYCKKVFVTC
type: DOMAIN
name: SRCR
description: SRCR domain

phrase: ARLTRSNSKCQGQLEV
type: DOMAIN
name: SRCR
description: SRCR domain

phrase: DGWHMVCSQSW
type: DOMAIN
name: SRCR
description: SRCR domain

phrase: ASKVCQRLNC
type: DOMAIN
name: SRCR
description: SRCR domain

phrase: SSIICYGQLGSFSN
type: DOMAIN
name: SRCR
description: SRCR domain

phrase: ARLTRSNSKCQGQLEVYLKDGWHMVCSQSWGRSSKQWEDPSQASKVCQRLNCGVPLSLGPFLVTYTPQSSIICYGQLGSFSNCSHSRNDMCHSLGLTC
type: DOMAIN
name: SRCR
description: SRCR domain

phrase: SRLVGGSSICEGTVEVRQGAQWAALCDSSSARSSLRWEEVCREQQCGSVNSYRVLDAGDPTSRGLFCPHQKLSQCHELWERNSYCKKVFVTC
type: DOMAIN
name: SRCR
description: SRCR domain
Protein sequence:
MTDKKYIVALDQGTTSSRAVVMDHDANIVSVSQREFEQIYPKPGWVEHDPMEIWASQSSTLVEALAKADINSDQIAAIGITNQRETVVVWERETGKPIYNAIVWQCRRTAEICEQLKRDGMEEYIRKATGLVVDPYFSGTKVKWILDHVEGSRERAKRGELLFGTVDTWLIWKMTQGRVHVTDYTNASRTMLFNIHDLDWDDKMLDALDIPRAMLPEVRKSSEVYGQTNIGGKGGTRIPIAGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVTSTHGLLTTIACGPRGEVNYALEGAVFMAGASIQWLRDEMKLISDAFDSEYFATKVKDTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNSNHIIRATLESIAFQTRDVLEAMQADSGIRLHALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDELQEKAVIEREFRPGIETTERNYRYSGWKKAVKRALAWEEHDEA

Annotated regions:
phrase: YIVALDQGTTSSRAVVMDHDANIVSVSQREFEQIYPKPGWVEHDPMEIWASQSSTLVEALAKADINSDQIAAIGITNQRETVVVWERETGKPIYNAIVWQCRRTAEICEQLKRDGMEEYIRKATGLVVDPYFSGTKVKWILDHVEGSRERAKRGELLFGTVDTWLIWKMTQGRVHVTDYTNASRTMLFNIHDLDWDDKMLDALDIPRAMLPEVRKSSEVYGQTNIGGKGGTRIPIAGIAGDQQAALF
type: DOMAIN
name: FGGY_N
description: Carbohydrate kinase FGGY, N-terminal

phrase: KNTYGTGCFMLMNTGEKAVTSTHGLLTTIACGPRGEVNYALEGAVFMAGASIQWLRDEMKLISDAFDSEYFATKVKDTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNSNHIIRATLESIAFQTRDVLEAMQADSGIRLHALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGL
type: DOMAIN
name: FGGY_C
description: Carbohydrate kinase FGGY, C-terminal

phrase: YFSGTKVKWILD
type: CONSERVED_SITE
name: Carb_kinase_FGGY_CS
description: Carbohydrate kinase, FGGY, conserved site

phrase: GAIFGLTRGVNSNHIIRATL
type: CONSERVED_SITE
name: Carb_kinase_FGGY_CS
description: Carbohydrate kinase, FGGY, conserved site
Protein sequence:
MATPTIKLNSGFDMPLVGFGLWKVNNDTCADQVYEAIKAGYRLFDGACDYGNEVEAGQGVARAIKEGIVKREELFIVSKLWNSFHDGDKVEPICRKQLADWGVDYFDLYIVHFPVALKYVDPAVRYPPGWSAKGDGSIEFSNASIQETWTAMETLVDKKLARSIGVSNFSAQLLMDLLRYARVRPATLQIEHHPYLTQPRLVEYAQKEGIAVTAYSSFGPLSFLELQVPNATNISPLFEHDVVKSVADKHGKTPAQVLLRWSTQRGIAVIPKSNNPTRLSQNLEVTGWDLEQSEIDAISALDIGLRFNDPIGYGMYVPIF

Annotated regions:
phrase: GFGLWKVNNDTCADQVYEAIKAGYRLFDGACDYGNEVEAGQGVARAIKEGIVKREELFIVSKLWNSFHDGDKVEPICRKQLADWGVDYFDLYIVHFPVALKYVDPAVRYPPGWSAKGDGSIEFSNASIQETWTAMETLVDKKLARSIGVSNFSAQLLMDLLRYARVRPATLQIEHHPYLTQPRLVEYAQKEGIAVTAYSSFGPLSFLELQVPNATNISPLFEHDVVKSVADKHGKTPAQVLLRWSTQRGIAVIPKSNNPTRLSQNLEVTGWDLEQSEIDAISAL
type: DOMAIN
name: NADP_OxRdtase_dom
description: NADP-dependent oxidoreductase domain

phrase: GYRLFDGACDYGNEVEA
type: CONSERVED_SITE
name: Aldo/ket_reductase_CS
description: Aldo/keto reductase, conserved site

phrase: IPKSNNPTRLSQNLE
type: CONSERVED_SITE
name: Aldo/ket_reductase_CS
description: Aldo/keto reductase, conserved site

phrase: METLVDKKLARSIGVSN
type: CONSERVED_SITE
name: Aldo/ket_reductase_CS
description: Aldo/keto reductase, conserved site
Protein sequence:
MADKKGSNSEKLLYCSFCGKSQHEVKKLIAGPSVFICDECIDLCNEIIRDEAAAAGVEASLSRSDLPSPQEIRDILDQYVIGQERAKKILAVAVYNHYKRLKHLDKKDDVELSKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQGGRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQDRDAGEVLRDVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNALVKQYHKLFAMERVELEIRPAALQAVARKAIRRKTGARGLRSIIEQALLDVMYELPTMKGVSKVIIDENVIDGDGKPLLIYEDTPKVAGSN

Annotated regions:
phrase: LLYCSFCGKSQHEVKKLIAGPSVFICDECIDLCNEIIRD
type: DOMAIN
name: Znf_CppX_C4
description: Zinc finger, ClpX C4-type

phrase: KSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQGGRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQDRDAGEVLRDVEPEDLIKFGLIPELIGRLP
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: DKKGSNSEKLLYCSFCGKSQHEVKKLIAGPSVFICDECIDLCNEIIRDEAAAA
type: DOMAIN
name: Znf_CppX_C4
description: Zinc finger, ClpX C4-type

phrase: LDEAALMKILVEPKNALVKQYHKLFAMERVELEIRPAALQAVARKAIRRKTGARGLRSIIEQALLDVMYELPT
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal

phrase: YCSFCGKSQHEVKKLIAGPSVFICDECIDLCNEII
type: DOMAIN
name: Znf_CppX_C4
description: Zinc finger, ClpX C4-type

phrase: LDEAALMKILVEPKNALVKQYHKLFAMERVELEIRPAALQAVARKAIRRKTGARGLRSIIEQALLDVMYELPTMKGVSKVIIDENVIDGDGKPLL
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal

phrase: SKSNILLIGPTGSGKTLLAQTLARLLNVPFVIADATTLTEAGYVGEDVENIIQKLLQNCNYEVDKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLVEGTMASVPPQGGRKHPNQDFIQVDTTNILFICGGAFDGLEKVITDRTEKTGIGFGATVKSKQDRDAGEVLRDVEPEDLIKFGLIPELIGRLPVVATLGKLDEAALMKILVEPKNA
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain
Protein sequence:
MLWHAMPPELNTARLMAGAGPAPMLAAAAGWQTLSAALDAQAVELTARLNSLGEAWTGGGSDKALAAATPMVVWLQTASTQAKTRAMQATAQAAAYTQAMATTPSLPEIAANHITQAVLTATNFFGINTIPIALTEMDYFIRMWNQAALAMEVYQAETAVNTLFEKLEPMASILDPGASQSTTNPIFGMPSPGSSTPVGQLPPAATQTLGQLGEMSGPMQQLTQPLQQVTSLFSQVGGTGGGNPADEEAAQMGLLGTSPLSNHPLAGGSGPSAGAGLLRAESLPGAGGSLTRTPLMSQLIEKPVAPSVMPAAAAGSSATGGAAPVGAGAMGQGAQSGGSTRPGLVAPAPLAQEREEDDEDDWDEEDDW

Annotated regions:
phrase: WHAMPPELNTARLMAGAGPAPMLAAAAGWQTLSAALDAQAVELTARLNSLGEAWTGGGSDKALAAATPMVVWLQTASTQAKTRAMQATAQAAAYTQAMATTPSLPEIAANHITQAVLTATNFFGINTIPIALTEMDYFIRMWNQAALAMEVYQAET
type: DOMAIN
name: PPE_dom
description: PPE domain
Protein sequence:
MAAGFKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNVGSIGTADGSALVKLGNTTVICGIKAEFGAPPTDAPDKGYVVPNVDLSPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISSGKLAWVLYCDLICLNHDGNILDACTFALLAALKNVQLPEVTINEETALAEVNLKKKSCLNIRTHPVATSFAVFDDTLLIVDPTEEEEHLATGTLTVVMDEEGRLCCLHKPGGSGLTGAKLQDCMSRAVTRHKEVKKLMDEVFKSMKPK

Annotated regions:
phrase: EFRTTTVNVGSIGTADGSALVKLGNTTVICGIKAEFGAPPTDAPDKGYVVPNVDLSPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQKEDLCISSGKLAWVLYCDLICLNHDGNILDACTFALLAALKNVQL
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1

phrase: PVATSFAVFDDTLLIVDPTEEEEHLATGTLTVVMDEEGRLCCLHKPGGSGLTGAKLQDCMSRA
type: DOMAIN
name: ExoRNase_PH_dom2
description: Exoribonuclease, phosphorolytic domain 2
Protein sequence:
MRIAFLGTPAFAVAALDALDWAGHALVTVVAQPDRPAGRGQALREPATKAWARARGVPVLQPEKVRDGTLAAALRALAPDALVVAAYGRILGKDLLTLAPHGAINVHGSLLPRWRGAAPIQWAVAEGERETGVTIMQMDEGLDTGDVLLQRALEIREDDTSETLAPRLAALGGEALVEALRLLEAGAIVPVRQDAAQATLARILEKEDGRIAWTSPARRVSDRLRGFTPWPGAFTTLEGRTLKVLEARPGADAEAPAGEPGEAEVVPGRGLAVACGGGTALLVTRVQLEGRPAQSALDLANGLRRKRFRLGT

Annotated regions:
phrase: GVTIMQMDEGLDTGDVLLQRALE
type: ACTIVE_SITE
name: GART_AS
description: Phosphoribosylglycinamide formyltransferase, active site

phrase: EDGRIAWTSPARRVSDRLRGFTPWPGAFTTLEGRTLKVLEARPGADAEAPAGEPGEAEVVPGRGLAVACGGGTALLVTRVQLEGRPAQS
type: DOMAIN
name: Met-tRNA-FMT_C
description: Methionyl-tRNA formyltransferase, C-terminal domain

phrase: LEKEDGRIAWTSPARRVSDRLRGFTPWPGAFTTLEGRTLKVLEARPGADAEAPAGEPGEAEVVPGRGLAVACGGGTALLVTRVQLEGRPAQSALDLANG
type: DOMAIN
name: Formyl_trans_C
description: Formyl transferase, C-terminal

phrase: MRIAFLGTPAFAVAALDALDWAGHALVTVVAQPDRPAGRGQALREPATKAWARARGVPVLQPEKVRDGTLAAALRALAPDALVVAAYGRILGKDLLTLAPHGAINVHGSLLPRWRGAAPIQWAVAEGERETGVTIMQMDEGLDTGDVLLQRALEIREDDTSETLAPRLAALGGEALVEALRLLEAGAIVPVRQDAAQATLA
type: DOMAIN
name: Met-tRNA-FMT_N
description: Methionyl-tRNA formyltransferase, N-terminal domain

phrase: MRIAFLGTPAFAVAALDALDWAGHALVTVVAQPDRPAGRGQALREPATKAWARARGVPVLQPEKVRDGTLAAALRALAPDALVVAAYGRILGKDLLTLAPHGAINVHGSLLPRWRGAAPIQWAVAEGERETGVTIMQMDEGLDTGDVLLQRALEIREDDTSETLAPRLAALGGEALVEA
type: DOMAIN
name: Formyl_transf_N
description: Formyl transferase, N-terminal
Protein sequence:
MLDSIEDAIADIRAGKVVIVVDDEDRENEGDFICAARCATPEVINFMATHGRGLVCAPLTEERCDELGLELMVGRNTALHATPFTVSVDLLKNGVTTGISASDRSKTILALIDPETKPADLGRPGHIFPLKARKEGVLRRAGHTEAAVDLARLAGFEPAGVLVEILKEDGEMARVPDLEEVAKRWNLKLISVQDLIKYRLKAESLISRDISVKMPTEWGDFDLYSFTQRSNGAQHLALVKGDVSGTEPVLVRVHSSCVTGDIFGSCRCDCGPQLHRAMQQIDREGRGVVVYMNQEGRGIGLLNKLRAYKLQEQGRDTVEANLELGFGMDERDYGVGASILRDLGITQMRLLTNNPRKRTGLMGYGLEIVETVPIEIEPNQHNQSYLTTKRDKLGHTILTKMRPVASASGTVTNES

Annotated regions:
phrase: ISVKMPTEWGDFDLYSFTQRSNGAQHLALVKGDVSGTEPVLVRVHSSCVTGDIFGSCRCDCGPQLHRAMQQIDREGRGVVVYMNQEGRGIGLLNKLRAYKLQEQGRDTVEANLELGFGMDERDYGVGASILRDLGITQMRLLTNNPRKRTGLMGYGLEIVETV
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MKKILRFAAVASGLVASLITVAPSASAQALRAQGASLADEVVAVVNNDVITGRELDQRVGLIARRLQQQKAPVPPTDQLRAQVLNQMVLERIQVQRAKDDGIVVDNATVQATLGRLAQANGMQLDQYKARIEAQGVPWDLFVRDARTELMLSKLREKEVDSKITVSDAEVASYIASQRGPNAGSQQDLRLEHIFVKAPANAPQADIDVAQKKAEGLLQQALASGANFERLAKNQSEADDAKKGGDLGFKSPASLPSDVVDAVSKLRPGEVNPTLIRVPDGFEIVRLVERRASQNPAASPKIVQTHVRHILLRVGEGKSESQARQQLIDIRRQIESGGDFEKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNTLQDGQVSNPVRTEYGYHLIQVLGRRDAEGSVQQQMDIARQAIGQRKAEQAYSDWLRELRDSSYVQIKLPVAQ

Annotated regions:
phrase: QQDLRLEHIFVKAPANAPQADIDVAQKKAEGLLQQALASGANFERLAKNQSEADDAKKGGDLGFKSPASLPSDVVDAVSKLRPGEVNPTLIRVPDGFEIVRLV
type: DOMAIN
name: PPIase_PpiC
description: Peptidyl-prolyl cis-trans isomerase, PpiC-type

phrase: HIFVKAPANAPQADIDVAQKKAEGLLQQALASGANFERLAKNQSEADDAKKGGDLGFKSPASLPSDVVDAVSKLRPGEVNPTLIRVPDGFEIVR
type: DOMAIN
name: PPIase_PpiC
description: Peptidyl-prolyl cis-trans isomerase, PpiC-type

phrase: DEVVAVVNNDVITGRELDQRVGLIARRLQQQKAPVPPTDQLRAQVLNQMVLERIQVQRAKDDGIVVDNATVQATLGRLAQANGMQLDQYKARIEAQGVPWDLFVRDARTELMLSKL
type: DOMAIN
name: SurA_N
description: SurA N-terminal

phrase: IVQTHVRHILLRVGEGKSESQARQQLIDIRRQIESGGDFEKFARTYSQDGSASQGGDLGWISPGETVPEFERAMNTLQDGQVSNPVRTEYGYHLIQVL
type: DOMAIN
name: PPIase_PpiC
description: Peptidyl-prolyl cis-trans isomerase, PpiC-type
Protein sequence:
DGYIKGKSGCRVACLIGNQGCLKDCRAYGASYGYCWTWGLACWCEGLPDNKTWKSESNTCG

Annotated regions:
phrase: DGYIKGKSGCRVACLIGNQGCLKDCRAYGASYGYCWTWGLACWCEGL
type: DOMAIN
name: Scorpion_toxin-like
description: Knottin, scorpion toxin-like

phrase: DGYIKGKSGCRVACLIGNQGCLKDCRAYGASYGYCWTWGLACWCEGLPDNKTWKSESNTC
type: DOMAIN
name: LCN-type_CS_alpha_beta_dom
description: LCN-type cysteine-stabilized alpha/beta (CS-alpha/beta) domain
Protein sequence:
MKNAAGDGRPALLGASVQDLESLAEALGEPRYRGRQLFTAIFNRRIADFAEMTDIPAGLRQTLATACELDRPHATTIVASVDGTRKYRFETPDGVAFESVYIPEVAKERHTHTLCVSSQSGCSLGCRFCFTASIKRYRNLTAAEIVGQVLAVQADVSRPEIDGKITNIVFMGMGEPLLNYDNVVRAAQLLTDPAGLDFSTRRVTISTAGIVPRIYDLGRDLTTQVAISLNASCDETRNRIMPINRKWPLSALIKALREYPLPRRRRFTIEYVMLGNVNDSLRDAEQLVRLLDGIPVKINLLPLNPHSRTEYEPPAPERVTAFQQALRGANLNAILRTPRGQDIAAACGQLGPAASPS

Annotated regions:
phrase: SSQSGCSLGCRFCFTASIKRYRNLTAAEIVGQVLAVQADVSRPEIDGKITNIVFMGMGEPLLNYDNVVRAAQLLTDPAGLDFSTRRVTISTAGIVPRIYDLGRDLTTQVAISLNASCDETRNRIMPINRKWPLSALIKALREYPLPRRRRFTIEYVMLGNVND
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: HTLCVSSQSGCSLGCRFCFTASIKRYRNLTAAEIVGQVLAVQADVSRPEIDGKITNIVFMGMGEPLLNYDNVVRAAQLLTDPAGLDFSTRRVTISTAGIVPRIYDLGRDLTTQVAISLNASCDETRNRIMPINRKWPLSALIKALREYPLPRRRRFTIEYVMLGNVNDSLRDAEQLVRLLDGIPVKINLLPLNPHSRTEYEPPAPERVTAFQ
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: ERHTHTLCVSSQSGCSLGCRFCFTASIKRYRNLTAAEIVGQVLAVQADVSRPEIDGKITNIVFMGMGEPLLNYDNVVRAAQLLTDPAGLDFSTRRVTISTAGIVPRIYDLGRDLTTQVAISLNASCDETRNRIMPINRKWPLSALIKALREYPLPRRRRFTIEYVMLGNVNDSLRDAEQLVRLLDGIPVKINLLPLNPHSRTEYEPPAPERVTAFQQALRGANLNAILRTP
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: RPALLGASVQDLESLAEALGEPRYRGRQLFTAIFNRRIADFAEMTDIPAGLRQTLATACELDRPHATTIVASVDGTRKYRFETPDGVAFESVYIPEVAKERHTHTLCVSSQSGCSLGCRFCFTASIKRYRNLTAAEIVGQVLAVQADVSRPEIDGKITNIVFMGMGEPLLNYDNVVRAAQLLTDPAGLDFSTRRVTISTAGIVPRIYDLGRDLTTQVAISLNASCDETRNRIMPINRKWPLSALIKALREYPLPRRRRFTIEYVMLGNVNDSLRDAEQLVRLLDGIPVKINLLPLNPHSRTEYEPPAPERVTAFQQALRGANLNAILRTPRGQDIAAACGQL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LLGASVQDLESLAEALGEPRYRGRQLFTAIFNRRIADFAEMTDIPAGLRQTLATAC
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MTQNIGKITQVISAVVDVKFTNNSKLPEILNALECYNAKQRIVLEVAQHIGDDTVRCISMGSTEGLIRGLEVIDTGNPIHIPVGIATLGRIMNVVGEPIDGKGEIKSSTISSIYKPAPDFINQSTERDILVTGIKVVDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLYHEMIASGVINLEAPEKSKVALVYGQMNEPPGARARVALSGLTIAESFRDMNAGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGELQERITSTKHGSITSVQAIYVPADDLTDPAPSTSFAHLDATTVLSRQIAELGIYPAVDPLDSNSQVLDPMIVGEEHYSVARQVQQVLQTYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFHVAEVFTGVEGKFVNLDDTIAGFKGLVEGKYDDLPEAAFYMVGTIDEAVEKAKILKI

Annotated regions:
phrase: ITQVISAVVDVKFTNNSKLPEILNALECYNAKQRIVLEVAQHIGDDTVRCISMGSTEGLIRGLEVIDT
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_N
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain

phrase: GIKVVDLLAPYTKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLYHEMIASGVINLEAPEKSKVALVYGQMNEPPGARARVALSGLTIAESFRDMNAGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGELQERITSTKHGSITSVQAIYVPADDLTDPAPSTSFAHLDATTVLSRQIAELGIYPAVDPLDSN
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_nucl-bd
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain

phrase: IVGEEHYSVARQVQQVLQTYKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFHVAEVFTGVEGKFVNLDDT
type: DOMAIN
name: ATP-synt_VA_C
description: ATP synthase A/B type, C-terminal domain

phrase: PAVDPLDSN
type: ACTIVE_SITE
name: ATPase_a/bsu_AS
description: ATPase, alpha/beta subunit, nucleotide-binding domain, active site

phrase: KGGKIGLFGGAGVGKTVLIMELINNVAKAHGGYTVFAGVGERTREGNDLYHEMIASGVINLEAPEKSKVALVYGQMNEPPGARARVALSGLTIAESFRDMNAGQDVLFFVDNIFRFTQAGAEVSALLGRIPSAVGYQPTLATDMGELQERITSTKHGSITSVQAIYVPADDLTDPAPSTSFAHLDA
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain
Protein sequence:
MSSELALEAAKLDEADELAGLRDRFVLDEAVYLDGNSLGALPTAVPGRVDDVVRRQWGSLRIRSWDESGWWTAPERIGDRIAPLVGAAPGQIVVGDSTSVNIFKAVVAAVRMADKDAREGGDRVGDRRDGDGVGAGGRPVRDEILVDATTFPTDGYIAESAARMTGRTLRPVTPAEVPDALGPRTAAVLLNHVDYRTGRLHDLPSLTAAIHEAGAYAVWDLCHSAGALPVGLDEHGVDLAVGCTYKYLNGGPGSPAYLYVRRDLQPRFDSPLPGWNSHTDPFGMRPSFEPAGGALRGRVGTPDILSMLALEAALDVWDTGNGAGAGAGAGAGAGVGVGAEAGVTVEAVRAKSLALTDFFLRCVAAYVPEGRVECLTPLAHAERGSQVALRCDDAGDVMKRLIQQGVVGDFRHPDVLRFGFTPLYVGFADVERAARVLAETLRSAG

Annotated regions:
phrase: VTPAEVPDALGPRTAAVLLNHVDYRTGRLHDLPSLTAAIHEAGAYAVWDLCHSAGALPVGLDEHGVDLAVGCTYKYLNGGPGSPAYLYVRRDLQPRFDSPLPGWNSHTDPFGMRPSFEPAGGALRGRVGTPDILSMLALEAALDV
type: DOMAIN
name: Aminotrans_V_dom
description: Aminotransferase class V domain
Protein sequence:
MPTVAQNIISQLEVQGVKRMYGIPGDSLNGLTDALRENGRIEWVHTRHEEAAAFAAAAEAEITGELAVCVGSCGPGNLHLINGLYDANRSRVPVLAIAAHIPTEEIGSNYFQETHPTDVFRECSVYVEQVSDASQMPRIMNIAMREAIEKRGVAVLVIAGDVALQDMPRITPRKIAKTEPRVLPSEAEIERAAQVLGGSKKVTILAGAGSAGAHAEVMELADKLAAPVVHALRGKDHISYDNPFDVGLTGLIGFASGYRAIEDCDVLLMLGTDFPYQQFLPEEATTIQVDLRGEQIGRRTKVDIPLVGTVKDTARALSEVLPRSKHRKHLDESTKHFAKTREKLDELATPSKRGDAIHPQYLARLVDQAASEDAVFTADVGSPTVWAARYLSMNGKRRLLGSFNHGSMANALSHAIGAQAVDRNRQSIALAGDGGLTMLLGELLTVKQNGLNVKTVVFNNSSLNFVELEMKAAGYLTYGTTLENPDFAAVAEAMGIKGIRVTDSADLPDAVEQMLAHDGPVVLDVLTDRQELSMPPTIKFEQAKGFALFAIKTVMSGRGDELLDLAKTNWRRMF

Annotated regions:
phrase: TVAQNIISQLEVQGVKRMYGIPGDSLNGLTDALRENGRIEWVHTRHEEAAAFAAAAEAEITGELAVCVGSCGPGNLHLINGLYDANRSRVPVLAIAAHIPTEEIGSNYFQE
type: DOMAIN
name: Thiamin_PyroP_enz_TPP-bd_dom
description: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain

phrase: TVAQNIISQLEVQGVKRMYGIPGDSLNGLTDALRENGRIEWVHTRHEEAAAFAAAAEAEITGELAVCVGSCGPGNLHLINGLYDANRSRVPVLAIAAHIPTEEIGSNYFQETHPTDVFRECSVYVEQVSDASQMPRIMNIAMREAIEKRGVAVLVIAGDVALQ
type: DOMAIN
name: TPP_PYR_POXB-like
description: Pyruvate oxidase POXB-like, pyrimidine-binding domain

phrase: IERAAQVLGGSKKVTILAGAGSAGAHAEVMELADKLAAPVVHALRGKDHISYDNPFDVGLTGLIGFASGYRAIEDCDVLLMLGTDFPYQQFLPEEATTIQVDLRGEQIGRRTKVDIPLVGTVKDTARA
type: DOMAIN
name: Thiamin_PyroP_enz_cen_dom
description: Thiamine pyrophosphate enzyme, central domain

phrase: DVGSPTVWAARYLSMNGKRRLLGSFNHGSMANALSHAIGAQAVDRNRQSIALAGDGGLTMLLGELLTVKQNGLNVKTVVFNNSSLNFVELEMKAAGYLTYGTTLENPDFAAVAEAMGIKGIRVTDSADLPDAVEQMLAHDGPVVLD
type: DOMAIN
name: TPP_enzyme_TPP-bd
description: Thiamine pyrophosphate enzyme, TPP-binding

phrase: IHPQYLARLVDQAASEDAVFTADVGSPTVWAARYLSMNGKRRLLGSFNHGSMANALSHAIGAQAVDRNRQSIALAGDGGLTMLLGELLTVKQNGLNVKTVVFNNSSLNFVELEMKAAGYLTYGTTLENPDFAAVAEAMGIKGIRVTDSADLPDAVEQMLAHDGPVVLDVLTDRQEL
type: DOMAIN
name: TPP_POXB-like
description: Pyruvate oxidase POXB-like, PP-binding domain
Protein sequence:
MAQHTVYFPDAFLTQMREAMPSTPSFDDFLAACQRPLRRSIRVNTLKISVADFLRLTAPYGWTLTPIPWCEEGFWIERDNEDALPLGSTAEHLSGLFYIQEASSMLPVAALFADGNAPQRVMDIAAAPGSKTTQIAARMNNEGTILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRLGGTLVYSTCTLNREENEAVCLWLKETYPDAVEFLPLGDLFPGTNKALTEEGFLHVFPQIYDCEGFFVARLRKTQAIPALPTPKYKVGNFPFSPVKDREAGQIRQAAASVGLNWDENLRPWQRDKELWLFPVGIEALIGKVRFSRLGIKLAETHNKGYRWQHEAVIALASPDNENAFELTPQEAEEWYRGRDVYPQAAPVADDVLVTFQHQPIGLAKRIGSRLKNSYPRELVRDGKLFTSNA

Annotated regions:
phrase: IRVNTLKISVADFLRLTAPYGWTLTPIPWCEEGFWIERDNEDALPLGSTAEHLSGLFYIQEASSMLPVAALFADGNAPQRVMDIAAAPGSKTTQIAARMNNEGTILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRLGGTLVYSTCTLNREENEAVCLWLKETYPDAVEFLPLGDLFPGTNKALTEEGFLHVFPQIYDCEGFFVARLR
type: DOMAIN
name: Nop2p
description: Nop2p

phrase: FDAILLDAPCS
type: CONSERVED_SITE
name: RsmB/NOL1/NOP2-like_CS
description: RsmB/NOL1/NOP2-like, conserved site

phrase: FLAACQRPLRRSIRVNTLKISVADFLRLTAPYGWTLTPIPWCEEGFWIERDNEDALPLGSTAEHLSGLFYIQEASSMLPVAALFADGNAPQRVMDIAAAPGSKTTQIAARMNNEGTILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRLGGTLVYSTCTLNREENEAVCLWLKETYPDAVEFLPLGDLFPGTNKALTEEGFLHVFPQIYDCEGFFVARLRK
type: DOMAIN
name: MeTrfase_RsmB-F_NOP2_dom
description: SAM-dependent methyltransferase RsmB-F/NOP2-type domain

phrase: FPDAFLTQMREAMPSTPSFDDFLAACQRPLRRSIRVNTLKISVADFLRLTAPYGWTLTPIPWCEEGFWIERDNEDALPLGSTAEHLSGLFYIQE
type: DOMAIN
name: Methyltr_RsmF_N
description: Ribosomal RNA small subunit methyltransferase F, N-terminal

phrase: FSPVKDREAGQIRQAAASVGLNWDENLRPWQRDKELWLFPVGIEALIGKVRFSRLGIKLAETHNKGYRWQHEAVIA
type: DOMAIN
name: YebU_pre-PUA_dom
description: Ribosomal RNA small subunit methyltransferase F, pre-PUA domain

phrase: PQRVMDIAAAPGSKTTQIAARMNNEGTILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRLGGTLVYSTCTLNREENEAVCLWLKETYPDAVEFLPLGDLFPGTNKALTEEGFLHVFPQIYDCEGFFVARL
type: DOMAIN
name: MeTrfase_RsmB-F_NOP2_cat
description: SAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic core

phrase: AEEWYRGRDVYPQAAPVADDVLVTFQHQPIGLAKRIGSRLKNSYPRELV
type: DOMAIN
name: Nol1_Nop2_Fmu_2
description: rRNA small subunit methyltransferase F, RNA-binding PUA-like domain
Protein sequence:
MMAAQPTIREVLFNPVFQNNPIGLQILGICSALAVTSNLKTATVMAIALTLVTGFSNLFISMIRRQIPSSIRMIVQMVIIASLVIVVDQVLKAYAYSLSKQLSVFVGLIITNCIVMGRAEAFAMANPPLVSFFDGIGNGLGYSAMLLVLGFVRELFGAGKLYGISVLPTVNDGGWYQPNGLLLLPPSAFFLIGLIIWALRTWKKDQVEAPTYKMAPQVSSKEAY

Annotated regions:
Protein sequence:
MQQNTVTLILVGVIIFLFISLFFYVIYSFVQKKKNRNFKQIKIQPKKNNKITPTSDQKLKADEFISIINKKREILNHQRADYLKIKETQESYQQLQEVISEYQKKLNLEKIKLIDQMEKEIKDNLNEKAVYYMINAMEQHAEDIISSKFSFTIKLENEGMKGKIIGKDGRNKRHFEQTTKTDLIIEPNMPAITISSPNPIRREKAKRTMEKLLETKNMDIAKISLFYKEVEEGFEQTCYEIGKDALENKLHIFDIDKKMYPIVGQLNFRTSYSQNVLLHCVEAAVLAANIAQKLNIDPIKAKKAAFFHDIGKAVDFEIDNDHVNSGVELAKKFNFEDYIINAIESHHNKVSPKTVYAALVKVVDKLSASRPGARFVSNDEYFKRIEELEKICKSFEGVSDAYVIKSGREIEVIIDPSLVSDDECKILIKDIKFKLEDSDLVNKQPIQITLIRKFTQSITTLGSASRLRT

Annotated regions:
phrase: LHCVEAAVLAANIAQKLNIDPIKAKKAAFFHDIGKAVDFEIDNDHVNSGVELAKKFNFEDYIINAIESHHNKVSPKTVYAALVKVVDKLS
type: DOMAIN
name: HD_domain
description: HD domain

phrase: VLLHCVEAAVLAANIAQKLNIDPIKAKKAAFFHDIGKAVDFEIDNDHVNSGVELAKKFNFEDYIINAIESHHNKVSPKTVYAALVKVVDKLSA
type: DOMAIN
name: HD_domain
description: HD domain

phrase: QNVLLHCVEAAVLAANIAQKLNIDPIKAKKAAFFHDIGKAVDFEIDNDHVNSGVELAKKFNFEDYIINAIESHHNKVSPKTVYAALVKVVDKLSASRPGARFVSNDEYFKRIEEL
type: DOMAIN
name: HD/PDEase_dom
description: HD/PDEase domain

phrase: IKLENEGMKGKIIGKDGRNKRHFEQTTKTDLIIEPNMPAITISSPNPIRREKAKRTM
type: DOMAIN
name: KH_dom_type_1
description: K Homology domain, type 1

phrase: SKFSFTIKLENEGMKGKIIGKDGRNKRHFEQTTKTDLIIEPNMPAITISSPNPIRREKAKRTMEKLL
type: DOMAIN
name: KH_dom
description: K Homology domain

phrase: YSQNVLLHCVEAAVLAANIAQKLNIDPIKAKKAAFFHDIGKAVDFEIDNDHVNSGVELAKKFNFEDYIINAIESHHN
type: DOMAIN
name: HDIG_dom
description: HDIG domain

phrase: YSQNVLLHCVEAAVLAANIAQKLNIDPIKAKKAAFFHDIGKAVDFEIDNDHVNSGVELAKKFNFEDYIINAIESHHNKVSPKTVYAALVKVVDKLSASRPGARFVS
type: DOMAIN
name: HD/PDEase_dom
description: HD/PDEase domain
Protein sequence:
MKHNNVIPNGHFKKKWENYVKTSFNQPAMKTRRRIARQNKAVKIFPRPTAGPIRPVVHAQTLTYNMKVRAGKGFTLEELKAAGIPKKLAPTIGISVDHHRKNRSLEGFQTNVQRLKTYKAKLVIFPRCARTVKVGDSAQQELANATQVQVDHMPIVREMPTMELVKLTSDMKLFNAYDKIRLEGINKRHAGVRAKRAAEAEKEEKK

Annotated regions:
phrase: RAGKGFTLEELKAA
type: CONSERVED_SITE
name: Ribosomal_eL13_CS
description: Large ribosomal subunit protein eL13, conserved site
Protein sequence:
MAARLCCQLDTARDVLCLRPVGAESRGRPLPGPLGALPPASPSAVPTDHGAHLSLRGLPVCAFSSTGPCALRFTSARRMETTVNAHRNLPKVLHKRTLGLSAMSTTDLEAYFKDCVFTEWEELGEEMRLKVFVLGGCRHKLVCSPAPCNFFTSA

Annotated regions: