nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MNLFNLDRFRFEKRSKIEEAPEAAPQPSQPGPSSPISLSAEEENAEGEVSRANTPDSDVTEKTEDSSVPEPPDNESKASLSCFQNQRTIQEYIDLSSDSEDVSPNCSSTVQEKKFSKDTVIIVSEPSEDEESHDLPSATRRNDISELEDLSELEDLKDAKLQTLKELFPQRSDSDLLKLIDSTSTMDGAIAAALLKFGDAGGGPRKRKLSSSSEAYEEDEANDDQSLKKPRGDRREESNESAEASSNWEKQESIVLKLQKEFPNFDKQELREVLKEHEWMYTEALESLKVFAEDQDVQCASQSEVTNGKEVARNQNYSKNAAKIKMKQKISMKPQNGFNKKRKKNVFNPKKAVEDSEYDSGSDAGSSLDEDYSSCEEVMEDGYKGKILHFLQDASIGELTLIPKCSQKKAQKIIELRPFNNWETLFTKMSKINGLSEDLIWNCKTVIQERDVVIRLMNKCEDISNKLTKQVTMLTGNGGGWNIEQPSLLNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLFQEGNKGPHLIVVPASTIDNWLREVNLWCPTLNVLCYYGSQEERKQIRFNIHNKYEDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINARNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQSIYEKERIAHAKQIIKPFILRRVKEEVLKLLPPKKDQIELCAMSEKQEQLYSGLFNRLKKSINNLEKNTEMCNVMMQLRKMANHPLLHRQYYTAEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYQHINSYQLDMDLILDSGKFRTLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEADEGSMPADIATLLKTSMGL

Annotated regions:
phrase: KFRTLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRV
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: ALVHKHGLNGILADEMGLGKTIQAIAFLAYLFQEGNKGPHLIVVPASTIDNWLREVNLWCPTLNVLCYYGSQEERKQIRFNIHNKYEDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINARNRLLLTGTPVQNNLLELMSLLNFVMP
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: SGKFRTLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKL
type: DOMAIN
name: SNF2/RAD54-like_C
description: SNF2/RAD5-like, C-terminal helicase domain

phrase: DILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRV
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: TLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEADE
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: QSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLFQEGNKGPHLIVVPASTIDNWLREVNLWCPTLNVLCYYGSQEERKQIRFNIHNKYEDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINARNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEI
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: YQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLFQEGNKGPHLIVVPASTIDNWLREVNLWCPTLNVLCYYGSQEERKQIRFNIHNKYEDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINARNRLLLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQSIYEKERIAHAKQIIKPFILRRVKEEVLKLLPPKKDQIELCAMSEKQEQLYSGLFNRLKKSINNLEKNTEMCNVMMQLRKMANH
type: DOMAIN
name: SNF2_N
description: SNF2, N-terminal

phrase: KQESIVLKLQKEFPNFDKQELREVLKEHEWMYTEALESLKVFA
type: DOMAIN
name: CUE
description: Ubiquitin system component CUE
Protein sequence:
MAKEESIEIEGVILEALPNAQFKVELENGLVVLAHVSGKIRMHYIRILPGDKVKVQISPYDISKGRITYRYK

Annotated regions:
phrase: EESIEIEGVILEALPNAQFKVELENGLVVLAHVSGKIRMHYIRILPGDKVKVQISPYDISKGRITYRY
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: MAKEESIEIEGVILEALPNAQFKVELENGLVVLAHVSGKIRMHYIRILPGDKVKVQISPYDISKGRITYRY
type: DOMAIN
name: RNA-binding_domain_S1_IF1
description: RNA-binding domain, S1, IF1 type

phrase: IEIEGVILEALPNAQFKVELENGLVVLAHVSGKIRMHYIRILPGDKVKVQISPYDISKGRITY
type: DOMAIN
name: RNA-binding_domain_S1_IF1
description: RNA-binding domain, S1, IF1 type
Protein sequence:
MDQEAVGNVVLLAIVTLISVVQNGFFAHKVEHESRNQNGRSFQRTGTLAFERVYTANQNCVDAYPTFLAVLWTAGLLCSQVPAAFAGLMYLFVRQKYFVGYLGERTQSTPGYIFGKRIILFLFLMSLAGILNYCLILLFGSDFENYIKTISTT

Annotated regions:
phrase: GTLAFERVYTANQN
type: CONSERVED_SITE
name: FLAP/GST2/LTC4S_CS
description: FLAP/GST2/LTC4S, conserved site
Protein sequence:
MDPNTVSSFQVDCFLWHVRKQVADQELGDAPFLDRLRRDQKSLRRRGSTLGLNIETATRVGKQIVERILKEESDEALKMTMASAPASRYLTDMTIEEMSRDWFMLMPKQKVAGPLCIRMDQAIMDKNIILKANFSVIFDRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAIGVLIGGLEWNDNTVRVSKTLQRFAWRSSNENGRPPLTPKQKRKMARTIRSKVRRNKMAD

Annotated regions:
Protein sequence:
MIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRRVTELLSMVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQERLQAEPFTDCVPMLRLEFTGQSVDAPLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHHVKVEVLGYV

Annotated regions:
phrase: IKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRRVTELLSMVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTPLAQKF
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: CVPMLRLEFTGQSVDAPLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHHVKVEV
type: DOMAIN
name: NIL_domain
description: NIL domain

phrase: AGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRRVTELLSMVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRRVTELLSMVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEAT
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: MIKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRRVTELLSMVGLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHP
type: DOMAIN
name: MetN_ABC
description: Methionine import ATP-binding protein MetN, ATP-binding domain

phrase: LSGGQKQRVAIARA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: MLRLEFTGQSVDAPLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHHVKVE
type: DOMAIN
name: NIL_domain
description: NIL domain
Protein sequence:
MTATPVYFDISCNGKPKGRVVFKLYDDVVPKTAANFRSLCTGDKGISPKSGKPLSYKDSIFHRVIKDFMCQGGDFTAPSDHLGTGGESIYGEKFEDENFKLNHNKPFLLSMANSGPNTNGSQFFITTVPTPHLDGKHVVFGEVIEGKSIVRQLERSEKGANDRPVEDWKIADCGELPANYEPVASGADDGTGDTYEEILTDNDTIDINNPQSVFAAVSKIKDIGTKLLKEGKLEKSYEKYTKANSYLNDYFPEGLSPEDLSTLHGLKLSCYLNAALVALKLKHGKDAIAAANNALEVEQIDDKSKTKALYRKGMGYILVKDEEQAQKILEEALELEPNDAAIQKGLQEAKHNIKLRRDKQKKAMAKFFS

Annotated regions:
phrase: TKALYRKGMGYILVKDEEQAQKILEEALELEPN
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: VSKIKDIGTKLLKEGKLEKSYEKYTKANSYLND
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: LSCYLNAALVALKLKHGKDAIAAANNALEVEQI
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: LYDDVVPKTAANFRS
type: DOMAIN
name: Cyclophilin-type_PPIase_dom
description: Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain

phrase: FHRVIKDFMCQG
type: DOMAIN
name: Cyclophilin-type_PPIase_dom
description: Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain

phrase: FLLSMANSGPNTNGS
type: DOMAIN
name: Cyclophilin-type_PPIase_dom
description: Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain

phrase: QFFITTVPTPHL
type: DOMAIN
name: Cyclophilin-type_PPIase_dom
description: Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain

phrase: GKHVVFGEVIEGKSI
type: DOMAIN
name: Cyclophilin-type_PPIase_dom
description: Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain

phrase: YKDSIFHRVIKDFMCQG
type: CONSERVED_SITE
name: Cyclophilin-type_PPIase_CS
description: Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site

phrase: TKALYRKGMGYILVKDEEQAQKILEEALELEPN
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: YFDISCNGKPKGRVVFKLYDDVVPKTAANFRSLCTGDKGISPKSGKPLSYKDSIFHRVIKDFMCQGGDFTAPSDHLGTGGESIYGEKFEDENFKLNHNKPFLLSMANSGPNTNGSQFFITTVPTPHLDGKHVVFGEVIEGKSIVRQLERSEKGANDRPVEDWKIADCG
type: DOMAIN
name: Cyclophilin-type_PPIase_dom
description: Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain

phrase: YFDISCNGKPKGRVVFKLYDDVVPKTAANFRSLCTGDKGISPKSGKPLSYKDSIFHRVIKDFMCQGGDFTAPSDHLGTGGESIYGEKFEDENFKLNHNKPFLLSMANSGPNTNGSQFFITTVPTPHLDGKHVVFGEVIEGKSIVRQLERSEKGANDRPVEDWKIADC
type: DOMAIN
name: Cyclophilin-type_PPIase_dom
description: Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain
Protein sequence:
MTTVIEFYISDKEREIVIEQLLEFFPKKKNCKDIEKGIYDFTKQYCKSDNSYLRLAQAIYIDCAKNIMFNLKDENNHTIKKIKKLIDKNKYNAYNLAFLNPEELNKDNWIKIIARKQMTEETLNQMATVEWKPCYACKNTSYHFYQLQTRSADEPMTTFYICKNCMKTYKVNN

Annotated regions:
phrase: PCYACKNTSYHFYQLQTRSADEPMTTFYICKNCMKTY
type: DOMAIN
name: Znf_TFIIS
description: Zinc finger, TFIIS-type

phrase: ISDKEREIVIEQLLEFFPKKKNCKDIEKGIYDFTKQYCKSDNSYLRLAQAIYIDCAKNIMFNLKDENNHTIKKIKKLIDKNKYNAYNLAFLNPEELNKDNWIKIIARKQMTEETLNQMATVEW
type: DOMAIN
name: TFIIS_cen_dom
description: Transcription elongation factor S-II, central domain

phrase: EWKPCYACKNTSYHFYQLQTRSADEPMTTFYICKNCMKTY
type: DOMAIN
name: Znf_TFIIS
description: Zinc finger, TFIIS-type

phrase: KPCYACKNTSYHFYQLQTRSADEPMTTFYICKNCMKTYK
type: DOMAIN
name: Znf_TFIIS
description: Zinc finger, TFIIS-type
Protein sequence:
MESITISQLKNWKRNKKKIAAITAYDFSFSRLFSNCGIPVILIGDSLGMTIQGHTSTLPVKIEDIAYHTKAVRKGAPNTFLISDLPFMSYYDTKQALKNTAKIIRSGANMIKMEGGKWLIEIIRELSNRLILICGHIGLIPQSFHYLGGYKVQGRKENDANKLIDEALLLEEAGINMLILECIPEKLAKKITESLSIPVIGIGSGKNTDGQILVMHDLLGITEGKTPSFTKNFLSESDSIQKAIQKYIYEVEHSIYPSKKHSF

Annotated regions:
Protein sequence:
MGVRAQQKERTRRSLIEAAFSQLSAERSFASLSLREVSREAGIAPTSFYRHFRDVDELGLTMVDESGLMLRQLMRQARQRIAKGGSVIRTSVSTFMEFIGNNPNAFRLLLRERSGTSAAFRAAVAREIQHFIAELADYLELENHMPRSFTEAQAEAMVTIVFSAGAEVLDVDIEQRRQLEERLVLQLRMISKGAYYWYRREQEKLAASRVE

Annotated regions:
phrase: VIRTSVSTFMEFIGNNPNAFRLLLRERSGTSAAFRAAVAREIQHFIAELADYLELENHMPRSFTEAQAEAMVTIVFSAGAEVLDVDIEQRRQLEERLVL
type: DOMAIN
name: DesT_TetR_C
description: DesT tetracyclin repressor-like, C-terminal domain

phrase: RTRRSLIEAAFSQLSAERSFASLSLREVSREAGIAPTSFYRHFRDVDELGLTMVDESGLM
type: DOMAIN
name: HTH_TetR
description: DNA-binding HTH domain, TetR-type

phrase: EAAFSQLSAERSFASLSLREVSREAGIAPTSFYRHFRDVDE
type: DOMAIN
name: HTH_TetR
description: DNA-binding HTH domain, TetR-type
Protein sequence:
MASGSGTKNLDFRRKWDKDEYEKLAEKRLTEEREKKDGKPVQPVKRELLRHRDYKVDLESKLGKTIVITKTTPQSEMGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSTLDQVKKRFEVNKKKMEEKQKDYDFEERMKELREEEEKAKAYKKEKQKEKKRRAEEDLTFEEDDEMAAVMGFSGFGSTKKSY

Annotated regions:
phrase: MGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGM
type: DOMAIN
name: Matrin/U1-like-C_Znf_C2H2
description: Matrin/U1-C-like, C2H2-type zinc finger

phrase: YYCNVCDCVVKDSINFLDHINGKKH
type: DOMAIN
name: Znf_C2H2_jaz
description: Zinc finger, double-stranded RNA binding
Protein sequence:
MSFCVNPNCPHPKNPNNVQVCQACGNSLRLNGRYQTLGLLGKGGFGATFAAADVALPGTPICVVKQLRPQTDDPNVFRMAKELFEREAQTLGRVGNHPQVPRLLDYFEDDHQFYLVQEYVKGHNLHQEVKKNGTFTEGSVKQFLTEILPILDYIHSQKVIHRDIKPANLIRRQTDQKLVLIDFGAVKNQIDSVLSSNTSAQTALTAFAVGTAGFAPPEQMAMRPVYASDIYATGVTCLYLLTGKTPKEIDCNSQTGEMDWEKHVTVSSKFAEVIRKMLELSVRHRYKSAQQVLDALEMPTYEDGMMQGMVSTPFTTLTGAGDEPATGIRMGNSSSPDYGDPSTRFNTNVQPRDPSSTSLNTGIKTRTAKPRQSPRDRATSNIESPTTRVRPASNMADGGSVGAGGIDYNMVNPKPFSRREEEKQAIANQPETKRWNGKTFLAEYAQGKRDFADQNLVGIVLAKAFVPGINCYQANLTNANFEQAELTRADFGKARLKNVIFKGANLSDAYFGYADLRGADLRGANLNGVNFKYANLQGANFSGADLGSAKVSPEQLKLAKTNWRTVMPGSGRRR

Annotated regions:
phrase: LGKGGFGATFAAADVALPGTPICVV
type: BINDING_SITE
name: Protein_kinase_ATP_BS
description: Protein kinase, ATP binding site

phrase: ANLSDAYFGYADLRGADLRGANLNGVNFKYANLQGANFS
type: REPEAT
name: 5peptide_repeat
description: Pentapeptide repeat

phrase: NCYQANLTNANFEQAELTRADFGKARLKNVIFK
type: REPEAT
name: 5peptide_repeat
description: Pentapeptide repeat

phrase: YQTLGLLGKGGFGATFAAADVALPGTPICVVKQLRPQTDDPNVFRMAKELFEREAQTLGRVGNHPQVPRLLDYFEDDHQFYLVQEYVKGHNLHQEVKKNGTFTEGSVKQFLTEILPILDYIHSQKVIHRDIKPANLIRRQTDQKLVLIDFGAVKNQIDSVLSSNTSAQTALTAFAVGTAGFAPPEQMAMRPVYASDIYATGVTCLYLLTGKTPKEIDCNSQTGEMDWEKHVTVSSKFAEVIRKMLELSVRHRYKSAQQVLDALEMPT
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: YQTLGLLGKGGFGATFAAADVALPGTPICVVKQLRPQTDDPNVFRMAKELFEREAQTLGRVGNHPQVPRLLDYFEDDHQFYLVQEYVKGHNLHQEVKKNGTFTEGSVKQFLTEILPILDYIHSQKVIHRDIKPANLIRRQTDQKLVLIDFGAVKNQIDSVLSSNTSAQTALTAFAVGTAGFAPPEQMAMRPVYASDIYATGVTCLYLLTGKTPKEIDCNSQTGEMDWEKHVTVSSKFAEVIRKMLELSVRHRYKSAQQV
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: YQTLGLLGKGGFGATFAAADVALPGTPICVVKQLRPQTDDPNVFRMAKELFEREAQTLGRVGNHPQVPRLLDYFEDDHQFYLVQEYVKGHNLHQEVKKNGTFTEGSVKQFLTEILPILDYIHSQKVIHRDIKPANLIRRQTDQKLVLIDFGAVKNQIDSVLSSNTSAQTALTAFAVGTAGFAPPEQMAMRPVYASDIYATGVTCLYLLTGKTPKEIDCNSQTGEMDWEKHVTVSSKFAEVIRKMLELSVRHRYKSAQQVLDALEMPT
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain
Protein sequence:
MRRIDPNKLELEERVVAVNRVAKVVKGGRRLRFSALVVVGDKNGHVGFGTGKAQEVPDAIRKAIEDAKKNLIEVPIVGTTIPHEVIGHFGAGKIILKPASEGTGVIAGGPARAVLELAGISDILSKSIGSNTPINMVRATVDGLKQLKRAEDVARLRGKTVEELLG

Annotated regions:
phrase: LEERVVAVNRVAKVVKGGRRLRFSALVVVGDKNGHVGFGTGKAQEVPDAIRKAIEDAKKNLIEV
type: DOMAIN
name: Ribosomal_uS5_N
description: Small ribosomal subunit protein uS5, N-terminal

phrase: LEERVVAVNRVAKVVKGGRRLRFSALVVVGDKNGHVGFGTGKAQEVPDAIRKAIEDAKKNLIE
type: DOMAIN
name: Ribosomal_uS5_N
description: Small ribosomal subunit protein uS5, N-terminal

phrase: GHFGAGKIILKPASEGTGVIAGGPARAVLELAGISDILSKSIGSNTPINMVRATVDGLKQLKRAEDVARL
type: DOMAIN
name: Ribosomal_uS5_C
description: Small ribosomal subunit protein uS5, C-terminal

phrase: GRRLRFSALVVVGDKNGHVGFGTGKAQEVPDA
type: CONSERVED_SITE
name: Ribosomal_uS5_N_CS
description: Small ribosomal subunit protein uS5, N-terminal, conserved site
Protein sequence:
MEKLKSIKITLVKSLIGAKKRHRLIIQGMGLRKINRTVFLPDLPSTRGMINKTAYLLKVEE

Annotated regions:
phrase: IKITLVKSLIGAKKRHRLIIQGMGLRKINRTVFLPDLPSTRGMINKTAY
type: DOMAIN
name: Ribosomal_uL30_ferredoxin-like
description: Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain
Protein sequence:
MSQEKKVFKTEWANRSLTIETGQLAKQANGAVLVRYGDTVVLSTAVASKEPRDGDFFPLMVNYEEKMYAAGKIPGGFKKREGRPSDEATLTARLIDRPIRPLFPKGYKYDVQIMNTVLSADPDCSPEMAAMIGSSMALSVSDIPFQGPIAGVKVGYIDGEYVINPTVAQKEVSRLDLEVAGHKDAVNMVEAGASEITESEMLEAIFFGHSEIQRLVNFQQEIVDHIQPKKKAFVPVEKDEVLVEKVKQLTQENGLKDAVLTFDKQQRDINLDALKEKVAAEFIDEEDADNEVLIKEVNSILNDLVKEEVRRLIAEEKIRPDGRKTDEIRPLESEVGVLPRAHGSGLFTRGQTQALSVLTLGSMSEYQILDGLGEEEQKRFMHHYNFPNYSVGETGPVRSPGRREIGHGALGERALSHIIPDLKDFPYTVRIVSEVLESNGSSSQASICGSTLALMDAGVPIKAPVAGIAMGLVTRDDSYTILTDIQGMEDALGDMDFKVAGTAEGITAIQMDIKIDGLTKEIIKEALDQAREGRLAILDHMLQTIDTSRSELSAFAPKVVTMTIKPEKIRDVIGPGGKKINEIIDETGVKLDIEQDGTIFIGAVDKDAIARARSIIEDITREAEVGQVYEGKVKRIEKYGAFVELFPGKDALVHISQIANERIDKVEDVLKVGDIFKIKVTEIDKQGRVNASHKALL

Annotated regions:
phrase: APKVVTMTIKPEKIRDVIGPGGKKINEIIDETGVKLDIEQDGTIFIGAVDKDAIARARSIIEDIT
type: DOMAIN
name: KH_dom
description: K Homology domain

phrase: EVGQVYEGKVKRIEKYGAFVELFPGKDALVHISQIANERIDKVEDVLKVGDIFKIKVTEIDKQGRVNASH
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: AEVGQVYEGKVKRIEKYGAFVELFPGKDALVHISQIANERIDKVEDVLKVGDIFKIKVTEIDKQGRVNAS
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: RSLTIETGQLAKQANGAVLVRYGDTVVLSTAVASKEPRDGDFFPLMVNYEEKMYAAGKIPGGFKKREGRPSDEATLTARLIDRPIRPLFPKGYKYDVQIMNTVLSADPDCSPEMAAMIGSSMALSVSDI
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1

phrase: EIRPLESEVGVLPRAHGSGLFTRGQTQALSVLTLGSMSEYQILDGLGEEEQKRFMHHYNFPNYSVGETGPVRSPGRREIGHGALGERALSHIIPDLKDFPYTVRIVSEVLESNGSSSQASICGSTLALMDAGV
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1

phrase: PVAGIAMGLVTRDDSYTILTDIQGMEDALGDMDFKVAGTAEGITAIQMDIKIDGLTKEIIKEALDQARE
type: DOMAIN
name: ExoRNase_PH_dom2
description: Exoribonuclease, phosphorolytic domain 2

phrase: GPIAGVKVGYIDGEYVINPTVAQKEVSRLDLEVAGHKDAVNMVEAGASEITESEMLEAIFFGH
type: DOMAIN
name: ExoRNase_PH_dom2
description: Exoribonuclease, phosphorolytic domain 2

phrase: LVEKVKQLTQENGLKDAVLTFDKQQRDINLDALKEKVAAEFIDEEDADNEVLIKEVNSILNDLVKEEVRRLIAEEKIRPDGR
type: DOMAIN
name: PNPase_PH_RNA-bd_bac/org-type
description: Polyribonucleotide nucleotidyltransferase, RNA-binding domain

phrase: VTMTIKPEKIRDVIGPGGKKINEIIDETGVKLDIEQDGTIFIGAVDKDAIARARSIIE
type: DOMAIN
name: KH_dom_type_1
description: K Homology domain, type 1

phrase: GQVYEGKVKRIEKYGAFVELFPGKDALVHISQIANERIDKVEDVLKVGDIFKIKVTEIDKQGRVNASH
type: DOMAIN
name: S1_domain
description: S1 domain
Protein sequence:
MAHSVKIYDTCIGCTQCVRACPTDVLEMVPWNGCRAKQIASAPRTEDCVGCKRCESACPTDYLSVRVYLRNEVTRSMGLAY

Annotated regions:
phrase: MAHSVKIYDTCIGCTQCVRACPTDVLEMVP
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: CVGCKRCESAC
type: CONSERVED_SITE
name: 4Fe4S_Fe_S_CS
description: 4Fe-4S ferredoxin, iron-sulphur binding, conserved site

phrase: TCIGCTQCVRACPTDVLEMVPWNGCRAKQIASAPRTEDCVGCKRCESACPT
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: IASAPRTEDCVGCKRCESACPTDYLSVRV
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: CIGCTQCVRAC
type: CONSERVED_SITE
name: 4Fe4S_Fe_S_CS
description: 4Fe-4S ferredoxin, iron-sulphur binding, conserved site
Protein sequence:
MIIHPKTRGFICTTTHPVGCEYNVLEQIQSTRARGVRSNGPKKVVVIGASSGYGLATRISAAFGFGADTLGVFFEKPGTEKKPGTAGWYNAAAFDKSAKNAGLYSRSINGDAFSDEMRAKVIEIIKSEMGGHVDLVVYSLASPLRKMPSTGEIKRSVLKPIGVAHTSNAIDTNKDQIIQATVEPATEQEIADTVAVMGGQDWELWINALAQADVLAPQTRTVAFSYIGTEITWPIYWHGALGKAKADLDATSRRLDARLQFLGGGANVAVLKSVVTQASAAIPALPLYIAIVFKVMKEKGLHEGTIEQADRLLRERLYREDGQPAAIDEEHRLRLDDWELREDVQAACKVIWEQVTNENLFQLTDYANYKRDFLKLFGFERADVDYDADVNPEVAFDVIEL

Annotated regions:
phrase: IDEEHRLRLDDWELREDVQAACKVIWEQVTNENLFQLTDYANYKRDFLKLFGFERADVDYDAD
type: DOMAIN
name: Eno_Rdtase_FAD-bd_dom
description: Enoyl reductase FAD binding domain

phrase: KPGTAGWYNAAAFDKSAKNAGLYSRSINGDAFSDEMRAKVIEIIKSEMGGHVDLVVYSLASPLRKMPSTGEIKRSVLKPIGVAHTSNAIDTNKDQIIQATVEPATEQEIADTVAVMGGQDWELWINALAQADVLAPQTRTVAFSYIGTEITWPIYWHGALGKAKADLDATSRRLDARLQFLGGGANVAVLKSVVTQASAAIPALPLYIAIVFKVMKEKGLHEGTIEQADRLLRERL
type: DOMAIN
name: Enoyl-CoA_Rdtase_cat_dom
description: Trans-2-enoyl-CoA reductase catalytic domain, putative

phrase: IIHPKTRGFICTTTHPVGCEYNVLEQIQSTRARGVRSNGPKKVVVIGASSGYGLATRISAAFGFGADTLGVFFEKPGT
type: DOMAIN
name: FabV-like_NADH_b
description: Trans-2-enoyl-CoA reductase-like, NAD(P)H binding domain
Protein sequence:
MGKKLMRIGISLPGELLDKFDKTLMKRGYSSRSEGIRDAIRTYNQHYEWMKQIRGSRSATISIVYDCSKKGVTSTLAEIQHEYVDMISSSVHFHMEEDLCFEVIILRGEGEQIVDLAQRILSIKGVKHLRLTTVPEEKNE

Annotated regions:
phrase: RIGISLPGELLDKFDKTLMKRGYSSRSEGIRDAIRT
type: DOMAIN
name: CopG
description: Ribbon-helix-helix protein, CopG

phrase: ATISIVYDCSKKGVTSTLAEIQHEYVDMISSSVHFHMEEDLCFEVIILRGEGEQIVDLAQRILSIKGVKHLRLTT
type: DOMAIN
name: TF_NikR_Ni-bd_C
description: Transcription factor, NikR, nickel binding C-terminal
Protein sequence:
MALEIDAKNAAATGDAGTIGKAKAKENKNHNNNNNAPAAGEKNLVNGSSAATKKKGKKNRNKSPPQNAVEAEASAALSNGHSENGDAADANANVLAEKGEGVAAGAVVGDGAEGGASAEGAVAEGDAAAAGEDVDLDALHDIGITVNISSPGTDVLSVQLSSMELVQEIHQLLMDREETCHRTCFSLQLDNVTLDNFAELKTIESLEQGSTIRVVEEPYTMREARIHVRHVRDLLKNLDPADAYNGIDCTSLTYLNTITQGDLLDKKRTRPDSVDCTPPDYVTPGVREPPLLPLHPNIKNAKGPQALKVLTTSAWNPPPGPRKLHGDLMYLYVVTMEDKRFHISACSKGFYINQSTDECFNPKPDNPSHLSHSLIDLLSHISPSFRRAFQAIQKRRTMRHAFERVATPYQVYQWAAPQLEHTVDAIRAEDAFSSKLGYEEHIPGQTRDWNEELQTTRELPRKTLPERLLRERAIFKVHGDFVTAATRGAMAVIDGNVLAINPGEDAKMQMFIWNNIFFSLGFDVRDHYKELGGDHAAFVAPRYDLHGVRVYNAVDIEGLYTLGTVVIDYRGYRVTAQSIIPGILEREQEQSVVYGSIDFGKTVLSHPKYLELLRQAGKHLKILPHSVLNERDEPVELCSSVECKGIIGNDGRHYILDLLRTFPPDVNFLKLQDVQLSKELTEMGFPIEHRHKLCCLRQELLEAFIEDRYVTFIRIAAVHLQQLNAKKQAATANAEKELPAIAEKQEEPNEEQPEKTEEQPAEKEESKP

Annotated regions:
phrase: RAEDAFSSKLGYEEHIPGQTRDWNEELQTTRELPRKTLPERLLRERAIFKVHGDFVTAATRGAMAVIDGNVLAINPGEDAKMQMFIWNNIFFSLGFDVRDHYKELGGDHAAFVAPRYDLHGVRVYNAVDIEGLYTLGTVVIDYRGYRVTAQSIIPGILEREQEQSVVYGSIDFGKTVLSHPKYLELLRQAGKHLKILPHSVLNERDEPVELCSSVECKGIIGNDGRHYILDLLRTFPPDVNF
type: DOMAIN
name: CLU_dom
description: CLU domain

phrase: DWNEELQTTRELPRKTLPERLLRERAIFKVHGDFVTAATRGAMAVIDGNVLAINPGEDAKMQMFIWNNIFFSLGFDVRDHYKELGGDHAAFVAPRYDLHGVRVYNAVDIEGLYTLGTVVIDYRGYRVTAQSIIPGILEREQEQSVVYGSIDFGKTVLSHPKYLELLRQAGKHLKILPHSVLNERDEPVELCSSVECKGIIGNDGRHYILDLLRTFPPDVN
type: DOMAIN
name: CLU_dom
description: CLU domain

phrase: DLMYLYVVTMEDKRFHISACSKGFYINQSTDECFNPKPDNPSHLSHSLIDLLSHISPSFRRAFQ
type: DOMAIN
name: GSKIP_dom
description: GSKIP domain

phrase: ELVQEIHQLLMDREETCHRTCFSLQLDNVTLDNFAELKTIESLEQGSTIRVVEEPYTMREARIHVRHVRD
type: DOMAIN
name: CLU_N
description: Clustered mitochondria protein, N-terminal
Protein sequence:
MNQTNFGFKKVDYTKKQGLVNNVFSNVADKYDLMNDLMSLGLHRLWKDEFIRQIPNLNSHILDVASGSGDIALKLAKKARDRVNNISLTLSDINEEMLKQAKKKAIDLNLFQNLKFTVASAEELPFPDDSFDYYTIAFGIRNVPDINKALKEACRVLKPMGKFICLEFSKVKEGYIKDFYKFYSFNIIPSIGQMIAGNKEAYEYLVESIDLFPSQDEFRIMIKDAGFEEVGYKNLSGGIVAIHSAYTQ

Annotated regions:
phrase: RVLKPMGKFICLEF
type: CONSERVED_SITE
name: UbiE/COQ5_MeTrFase_CS
description: UbiE/COQ5 methyltransferase, conserved site

phrase: YDLMNDLMSLGLHRL
type: CONSERVED_SITE
name: UbiE/COQ5_MeTrFase_CS
description: UbiE/COQ5 methyltransferase, conserved site
Protein sequence:
MAGPRVEVDGSIMEGGGQILRVSTALSCLLGLPLRVQKIRAGRSTPGLRPQHLSGLEMIRDLCDGQLEGAEIGSTEITFTPEKIKGGIHTADTKTAGSVCLLMQVSMPCVLFAASPSELHLKGGTNAEMAPQIDYTVMVFKPIVEKFGFIFNCDIKTRGYYPKGGGEVIVRMSPVKQLNPINLTERGCVTKIYGRAFVAGVLPFKVAKDMAAAAVRCIRKEIRDLYVNIQPVQEPKDQAFGNGNGIIIIAETSTGCLFAGSSLGKRGVNADKVGIEAAEMLLANLRHGGTVDEYLQDQLIVFMALANGVSRIKTGPVTLHTQTAIHFAEQIAKAKFIVKKSEDEEDAAKDTYIIECQGIGMTNPNL

Annotated regions:
phrase: TERGCVTKIYGRAFVAGVLPFKVAKDMAAAAVRCIRKEIRDLYVNIQPVQEPKDQAFGNGNGIIIIAETSTGCLFAGSSLGKRGVNADKVGIEAAEMLLAN
type: DOMAIN
name: RNA3'-term_phos_cycl_insert
description: RNA 3'-terminal phosphate cyclase, insert domain

phrase: MEGGGQILRVSTALSCLLGLPLRVQKIRAGRSTPGLRPQHLSGLEMIRDLCDGQLEGAEIGSTEITFTPEKIKGGIHTADTKTAGSVCLLMQVSMPCVLFAASPSELHLKGGTNAEMAPQIDYTVMVFKPIVEKFGFIFNCDIKTRGYYPKGGGEVIVRMSPVKQLNPINLTERGCVTKIYGRAFVAGVLPFKVAKDMAAAAVRCIRKEIRDLYVNIQPVQEPKDQAFGNGNGIIIIAETSTGCLFAGSSLGKRGVNADKVGIEAAEMLLANLRHGGTVDEYLQDQLIVFMALANGVSRIKTGPVTLHTQTAIHFAEQIAKAKF
type: DOMAIN
name: RNA3'_phos_cyclase_dom
description: RNA 3'-terminal phosphate cyclase domain

phrase: RGYYPKGGGE
type: CONSERVED_SITE
name: RNA3'_term_phos_cycl-like_CS
description: RNA 3'-terminal phosphate cyclase-like, conserved site
Protein sequence:
MGVQGLWKLLECSGHRVSPEALEGKVLAVDISIWLNQALKGVRDSHGNVIENAHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQTLAKRRQRKDSASIDSRKTTEKLLKTFLKRQALKTAFRSSRHEAPPSLTQVQRQDDIYVLPPLPEEEKHSSEEEDEKQWQARMDQKQALQEEFFHNPQAIDIESEDFSSLPPEVKHEILTDMKEFTKRRRTLFEAMPEESNDFSQYQLKGLLKKNYLNQHIENVQKEMNQQHSGQIQRQYQDEGGFLKEVESRRVVSEDTSHYILIKGIQGKKVMDVDSESLPSSSNVHSVSSNLKSSPHEKVKPEREPEAAPPSPRTLLAIQAAMLGSSSEDEPESREGRQSKERNSGATADAGSISPRTCAAIQKALDDDNDEKVSGSSDDLAEKMLLGSGLEQEEHADETAERGGGVPFDTAPLTPSVTEVKECVTSGSSANGQTDSAHSFTTASHRCDTPKETVSLARAVKEASQISSECEVEGRPAALSPAFIGTPSSHVSGVLSEREPTLAPPTTRTHSDQGIDIHPEDPELQNGLYPLETKCNSSRLSSDDETEGGQNPAPKACSTVHVPAEAMSNLENALPSNAEERGDFQETIQLREVPEAAARELISAPKPMGPMEMESEESESDGSFIEVQSVVSNSELQTESSEASTHLSEKDAEEPRETLEEGTSRDTECLLQDSSDIEAMEGHREADIDAEDMPNEWQDINLEELDALESNLLAEQNSLKAQKQQQDRIAASVTGQMFLESQELLRLFGVPYIQAPMEAEAQCAMLDLTDQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYYQYVDFYSQLGLDRNKLINLAYLLGSDYTEGIPTVGCVTAMEILNEFPGRGLDPLLKFSEWWHEAQNNKKVAENPYDTKVKKKLRKLQLTPGFPNPAVADAYLRPVVDDSRGSFLWGKPDVDKISTFCQRYFGWNRMKTDESLYPVLKHLNAHQTQLRIDSFFRLAQQEKQDAKLIKSHRLNRAVTCILRKEREEKAPELTKVTEALDDAKGKTQKRELPYKKETSVPKRRRPSGNGGFLGDPYCSESPQESSCEDGEGSSVMSARQRSAAESSKISCSDVPDLVRDPPHGRQGCVSTSSSSEDDEDKAKTVLVTARPVFGKKKLKLKSMKRRKKKT

Annotated regions:
phrase: IRPIFVFDGDAPLL
type: CONSERVED_SITE
name: XPG_CS
description: XPG conserved site

phrase: GVPYIQAPMEAEAQ
type: CONSERVED_SITE
name: XPG_CS
description: XPG conserved site

phrase: RLFGVPYIQAPMEAEAQCAMLDLTDQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYYQYVDFYSQLG
type: DOMAIN
name: XPG-I_dom
description: XPG-I domain

phrase: MGVQGLWKLLECSGHRVSPEALEGKVLAVDISIWLNQALKGVRDSHGNVIENAHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQTLAKRRQRKD
type: DOMAIN
name: XPG_DNA_repair_N
description: XPG, N-terminal

phrase: MGVQGLWKLLECSGHRVSPEALEGKVLAVDISIWLNQALKGVRDSHGNVIENAHLLTLFHRLCKLLFFRIRPIFVFDGDAPLLKKQTLAKRRQRKDS
type: DOMAIN
name: XPG_DNA_repair_N
description: XPG, N-terminal

phrase: GVPYIQAPMEAEAQCAMLDLTDQTSGTITDDSDIWLFGARHVYKNFFNKNKFVEYYQYVDFYSQLGLDRNKLINLAYLLGS
type: DOMAIN
name: XPG-I_dom
description: XPG-I domain

phrase: RNKLINLAYLLGSDYTEGIPTVGCVTAMEILNE
type: CONSERVED_SITE
name: HhH2
description: Helix-hairpin-helix motif, class 2