nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSRPRIVFMGTPEFAVSSLAACFELGDVVAVVTQPDKPKGRGNTVTAPPVKELALSRGVPVLQPTKLRTPPFAEELRQYAPDVCVVTAYGRILPKDLLELPTHGCVNVHGSLLPRFRGAAPIQWAIAHGDTETGVSLMVMDEGLDTGPVLAMKRMAIAPDETSASLYPKLAALGGEVLREFLPAYLSGELKPVPQPSEGMVLAPIIEKDQGRLDFTKPAVELERRLRAFTPWPGAFTTLGGKLLKVHRAQARGGSGAPGTVLASGPDGIEVACGEGSLVLLDLQPEGKRVMRAADFLQGHKLAPGSQPFVAG

Annotated regions:
phrase: IEKDQGRLDFTKPAVELERRLRAFTPWPGAFTTLGGKLLKVHRAQARGGSGAPGTVLASGPDGIEVACGEGSLVLLDLQPEGKRVMRAADFLQG
type: DOMAIN
name: Formyl_trans_C
description: Formyl transferase, C-terminal

phrase: RIVFMGTPEFAVSSLAACFELGDVVAVVTQPDKPKGRGNTVTAPPVKELALSRGVPVLQPTKLRTPPFAEELRQYAPDVCVVTAYGRILPKDLLELPTHGCVNVHGSLLPRFRGAAPIQWAIAHGDTETGVSLMVMDEGLDTGPVLAMKRMAIAPDETSASLYPKLAALGGEVLR
type: DOMAIN
name: Formyl_transf_N
description: Formyl transferase, N-terminal

phrase: RIVFMGTPEFAVSSLAACFELGDVVAVVTQPDKPKGRGNTVTAPPVKELALSRGVPVLQPTKLRTPPFAEELRQYAPDVCVVTAYGRILPKDLLELPTHGCVNVHGSLLPRFRGAAPIQWAIAHGDTETGVSLMVMDEGLDTGPVLAMKRMAIAPDETSASLYPKLAALGGEVLREFLPAYLSGELKPVPQPSEGMVLAPI
type: DOMAIN
name: Met-tRNA-FMT_N
description: Methionyl-tRNA formyltransferase, N-terminal domain

phrase: GVSLMVMDEGLDTGPVLAMKRMA
type: ACTIVE_SITE
name: GART_AS
description: Phosphoribosylglycinamide formyltransferase, active site

phrase: DQGRLDFTKPAVELERRLRAFTPWPGAFTTLGGKLLKVHRAQARGGSGAPGTVLASGPDGIEVACGEGSLVLLDLQPEGKRVMR
type: DOMAIN
name: Met-tRNA-FMT_C
description: Methionyl-tRNA formyltransferase, C-terminal domain
Protein sequence:
MIELCGLKKSFSGKLALNDINLFIQEGEIFGVIGKSGAGKSTLLRCINILEKPDEGEVVIDGQNLMSLSRKDLALARHKIAMIFQHFNLLNSKTVFDNIALPMRIQGIDEESIKQKIEELLPVVELTDKKDAFPSQLSGGQKQRVAIARALSCSPKVLLCDEATSALDPATTDAILSLLKKINELYGITIVLITHEMDVVKRICQRLSVMVDGKIVETTALSNIFNKPESLARKMLYAQISPELPTCLTRRLADYATEKPLVRLFFQGEEATVPFISQTSRELNMDINILLANIDRFDGVTCGVLVVELTANPLLLEAFINRCEQAGITVEVLGYVLPDGL

Annotated regions:
phrase: EGEIFGVIGKSGAGKSTLLRCINILEKPDEGEVVIDGQNLMSLSRKDLALARHKIAMIFQHFNLLNSKTVFDNIALPMRIQGIDEESIKQKIEELLPVVELTDKKDAFPSQLSGGQKQRVAIARALSCSPKVLLCDEATSALDPATTDAILSLLKKINELYGITIVLITHEMDVVKRICQRLSVMVDGKIVETTA
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LVRLFFQGEEATVPFISQTSRELNMDINILLANIDRFDGVTCGVLVVELTANPLLLEAFINRCEQAGITVE
type: DOMAIN
name: NIL_domain
description: NIL domain

phrase: MIELCGLKKSFSGKLALNDINLFIQEGEIFGVIGKSGAGKSTLLRCINILEKPDEGEVVIDGQNLMSLSRKDLALARHKIAMIFQHFNLLNSKTVFDNIALPMRIQGIDEESIKQKIEELLPVVELTDKKDAFPSQLSGGQKQRVAIARALSCSPKVLLCDEATSALDPATTDAILSLLKKINELYGITIVLITHEMDVVKRICQRLSVMVDGKIVETTALSNIFNKP
type: DOMAIN
name: MetN_ABC
description: Methionine import ATP-binding protein MetN, ATP-binding domain

phrase: EKPLVRLFFQGEEATVPFISQTSRELNMDINILLANIDRFDGVTCGVLVVELTANPLLLEAFINRCEQAGITVEV
type: DOMAIN
name: NIL_domain
description: NIL domain

phrase: LNDINLFIQEGEIFGVIGKSGAGKSTLLRCINILEKPDEGEVVIDGQNLMSLSRKDLALARHKIAMIFQHFNLLNSKTVFDNIALPMRIQGIDEESIKQKIEELLPVVELTDKKDAFPSQLSGGQKQRVAIARALSCSPKVLLCDEAT
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: LSGGQKQRVAIARA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: IELCGLKKSFSGKLALNDINLFIQEGEIFGVIGKSGAGKSTLLRCINILEKPDEGEVVIDGQNLMSLSRKDLALARHKIAMIFQHFNLLNSKTVFDNIALPMRIQGIDEESIKQKIEELLPVVELTDKKDAFPSQLSGGQKQRVAIARALSCSPKVLLCDEATSALDPATTDAILSLLKKINELYGITIVLITHEMDVVKRICQRLSVMVDGKIVETTALSNIFNKPESLARKML
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain
Protein sequence:
MTKKLLIKTWGCQMNEYDSSKMADLLGAANGYELTEEPTEADVLLLNTCSIREKAQEKVFHQLGRWKNLKDKKPDLVIGVGGCVATQEGDHIRQRAPYVDVIFGPQTLHRLPEMIRQSQSNEKPVMDISFPEIEKFDNLPEPKAEGATAFVSIMEGCSKYCTYCVVPYTRGEEVSRPLDDVLFEIAQLAEQGVREVNLLGQNVNAYRGPMHDGDICTFAELLRMVASIDGIDRLRFTTSHPLEFGDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARPDIQISSDFIVGFPGETAKDFQDTMKLIKDVDFDMSFSFIFSARPGTPAADYPCDIPEQEKKDRLAELQQQVNSQAMRYSRLMLDTEQRVLVEGPSKKNLMELRARTENNRVVNFEGSADLIGQFVDVKITDVFANSLRGELVRTEKDMGLRVVMTPAEMMEKTRREDDLGVGTFTP

Annotated regions:
phrase: KKLLIKTWGCQMNEYDSSKMADLLGAANGYELTEEPTEADVLLLNTCSIREKAQEKVFHQLGRWKNLKDKKPDLVIGVGGCVATQEGDHIRQRAPYVDVIFGPQTLHRLPEMIRQSQ
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: VSIMEGCSKYCTYCVVPYTR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: ATAFVSIMEGCSKYCTYCVVPYTRGEEVSRPLDDVLFEIAQLAEQGVREVNLLGQNVNAYRGPMHDGDICTFAELLRMVASIDGIDRLRFTTSHPLEFGDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARPDIQISSDFIVGFPGETAKDFQDTMKLIKDVDFDMSFSFIFSARPGTPAADYPCDIPEQEKKDRLAELQ
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: VSIMEGCSKYCTYCVVPYTRGEEVSRPLDDVLFEIAQLAEQGVREVNLLGQNVNAYRGPMHDGDICTFAELLRMVASIDGIDRLRFTTSHPLEFGDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARPDIQISSDFIVGFPGETAKDFQDTMKL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: RLMLDTEQRVLVEGPSKKNLMELRARTENNRVVNFEGSADLIGQFVDVKITDVFANSLRGELV
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: KLLIKTWGCQMNEYDSSKMADLLGAANGYELTEEPTEADVLLLNTCSIREKAQEKVFHQLGRWKNLKDKKPDLVIGVGGCVATQEGDHIRQRAPYVDVIF
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: KAEGATAFVSIMEGCSKYCTYCVVPYTRGEEVSRPLDDVLFEIAQLAEQGVREVNLLGQNVNAYRGPMHDGDICTFAELLRMVASIDGIDRLRFTTSHPLEFGDDIIAVYEDTPELVSFLHLPVQSGSDRILTMMKRPHTAIEYKSIIRKLRKARPDIQISSDFIVGFPGETAKDFQDTMKLIKDVDFDMSFSFIFSARPGTPAADYPCDIPEQEKKDRLAELQQQVNSQAM
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TEQRVLVEGPSKKNLMELRARTENNRVVNFEGSADLIGQFVDVKITDVFANSLRGEL
type: DOMAIN
name: TRAM_dom
description: TRAM domain
Protein sequence:
MAYGWWRRRRRRWRRWRRRPWRRRWRTRRRRPARRRGRRRNVRRRRRGGRWRRRYRRWKRKGRRRKKAKIIIRQWQPNYRRRCNIVGYIPVLICGENTVSRNYATHSDDTNYPGPFGGGMTTDKFTLRILYDEYKRFMNYWTASNEDLDLCRYLGVNLYFFRHPDVDFIIKINTMPPFLDTELTAPSIHPGMLALDKRARWIPSLKSRPGKKHYIKIRVGAPRMFTDKWYPQTDLCDMVLLTVYATAADMQYPFGSPLTDSVVVNFQVLQSMYDKTISILPDEKSQREILLNKIASYIPFYNTTQTIAQLKPFIDAGNVTSGATATTWASYINTTKFTTATTTTYAYPGTNRPPVTMLTCNDSWYRGTVYNTQIQQLPIKAAKLYLEATKTLLGNTFTNEDYTLEYHGGLYSSIWLSPGRSYFETTGAYTDIKYNPFTDRGEGNMLWIDWLSKKNMNYDKVQSKCLISDLPLWAAAYGYVEFCAKSTGDQNIHMNARLLIRSPFTDPQLLVHTDPTKGFVPYSLNFGNGKMPGGSSNVPIRMRAKWYPTLFHQQEVLEALAQSGPFAYHSDIKKVSLGMKYRFKWIWGGNPVRQQVVRNPCKETHSSGNRVPRSLQIVDPKYNSPELTFHTWDFRRGLFGPKAIQRMQQQPTTTDIFSAGRKRPRRDTEVYHSSQEGEQKESLLFPPVKLLRRVPPWEDSQQEESGSQSSEEETQTVSQQLKQQLQQQRILGVKLRLLFNQVQKIQQNQDINPTLLPRGGDLASLFQI

Annotated regions:
Protein sequence:
MALQAATTTSFLPSALSARKEGAVKDSAFLGVRLGDGLKLETSALGLRTKRVSTSSVAIRAQASAAVSSPTVTPASPSGKQTLRKGTAVITGASSGLGLATAKALAETGRWHVVMGCRDFLKASRAAKAAGMEKGSYTIVHLDLASLDSVRQFVANVRRLEMPVDVVVCNAAVYQPTAKQPSFTADGFEMSVGVNHLGHFLLARELLADLTSSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLASGLDGVSSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHGETGVTFASLYPGCIATTGLFREHVPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNNNSASFENQLSEEASDPEKAKKVWELSEKLVGLADHDQ

Annotated regions:
Protein sequence:
MAKALEQPFDVANIPGPKMATLLEKGKPVANMIKKAKRPLLIVGPDMTDEMFERVKKFVEKDITVVATGSAITRFIDAGLGEKVNYAVLHELTQFLLDPDWKGFDGQGNYDLVLMLGSIYYHGSQMLAAIKNFAPHIRALAIDRYYHPNADMSFGNLWKKEEDYLKLLDEILAEL

Annotated regions:
Protein sequence:
MASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTADSLHLGHLVPLLCLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVDKIRKQVAPFLDFDCGENSAIAANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQRLNREDQGISFTEFSYNLLQGYDFACLNKLYGVSLQIGGSDQWGNITSGIDLTRRLHQNQVFGLTVPLITKADGTKFGKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFTFMSIEEINALEEEDKNSGKAPRAQYVLAEQVTRLVHGEEGLQAAKRITECLFSGSLSALSEADFEQLAQDGVPMVEMEKGADLMQALVDSELQPSRGQARKTIASNAVTINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCLICWK

Annotated regions:
phrase: DLMQALVDSELQPSRGQARKTIASNAVTINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNY
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: PTADSLHLGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: DFEQLAQDGVPMVEMEKGADLMQALVDSELQPSRGQARKTIASNAVTINGEKQSDPEYFFKEEDRLFGRFTLLRRGKKNYCL
type: DOMAIN
name: SYY-like_C
description: Tyrosine--tRNA ligase SYY-like, C-terminal domain
Protein sequence:
MAARLLRLGRALGPLPPRAPRASARHLQTENHDVQRPETFSAKSLMDIGTRRIFTSDHDIFRESVRKFFREEVAPNHAEWEKAGQVSREVWEKAGKQGLLGISISEKHGGLGGNILSSAVVWEEQMYVNCTGPGFGLHSDIAMPYIANYGSEEQIKRFIPEMTAGKCISAIAMTEPGAGSDLQGVRTYAKKDGSDWILNGSKVFITNGWLSDLVIVVAVTNREARSAAHGISLFLVEDGMKGFIKGSKLEKIGLKAQDTAELFFEDVRLPASALLGEENKGFYYLMAELPQERLAIAGIALASCEFMFEETRNYVKQRKAFGKTIAHLQAVQHKLAELKTQICVGRAFVDSCLQLHAEKRLDSSTASMAKYWASDLQNSVATQCLQLHGGWGYMWEYPIAKAFVDSRVQTIYGGTNEIMKELIARSIVSDS

Annotated regions:
phrase: QLHGGWGYMWEYPIAKAFV
type: CONSERVED_SITE
name: Acyl-CoA_DH_CS
description: Acyl-CoA dehydrogenase, conserved site

phrase: AMTEPGAGSDLQ
type: CONSERVED_SITE
name: Acyl-CoA_DH_CS
description: Acyl-CoA dehydrogenase, conserved site

phrase: AIAMTEPGAGSDLQGVRTYAKKDGSDWILNGSKVFITNGWLSDLVIVVAVTNREARSAAHGISLFLVEDGMKGFIKGSKLEKIGLKAQDTAELFFED
type: DOMAIN
name: Acyl-CoA_Oxase/DH_mid-dom
description: Acyl-CoA oxidase/dehydrogenase, middle domain

phrase: NKGFYYLMAELPQERLAIAGIALASCEFMFEETRNYVKQRKAFGKTIAHLQAVQHKLAELKTQICVGRAFVDSCLQLHAEKRLDSSTASMAKYWASDLQNSVATQCLQLHGGWGYMWEYPIAKAFVDSRVQTIYGGTNEIMKELIARS
type: DOMAIN
name: AcylCo_DH/oxidase_C
description: Acyl-CoA dehydrogenase/oxidase, C-terminal

phrase: TSDHDIFRESVRKFFREEVAPNHAEWEKAGQVSREVWEKAGKQGLLGISISEKHGGLGGNILSSAVVWEEQMYVNCTGPGFGLHSDIAMPYIANYGSEEQIKRFIPEMTAG
type: DOMAIN
name: AcylCoA_DH/ox_N
description: Acyl-CoA dehydrogenase/oxidase, N-terminal
Protein sequence:
MRAKGIRKNWQHLWRWGTMLLGLLMICNAADQLWVTVYYGVPVWKEATTTLFCASDAKSYDPEAHNVWATHACVPTDPNPQEVLLENVTENFNMWKNNMVEQMHEDIISLWDESLKPCVKLTPLCVPLNCTNWNSSISSMEDQEVKNCSFNISTRGYNKGQKEEYAAFYKFDLVRIVENNNKSENSNTSFRLINCNTSVITQACPKVSFEPIPIHYCAPAGFAILRCNDKKFKGTGSCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSENFTNNAKTIIVQLKEAVRINCTRPNNNTRKSIHMGPGKAFYATDIIGDIRQAHCNLSKTEWNNTLQKVVEKLREQFENGTIVFKQSSGGDPEITMHSFNCGGEFFYCNTSQLFNSTWNGTNIKDNDTITLPCRIKQIINRWQEVGKAMYAPPIKGQIMCNSTITGLLLTRDGGTPNKSGPEIFRPGGGNMKDNWRSELFKYKVVKIEPLGIAPTKAKRRVVQREKRAVGIGAVFLGFLGAAGSTMGSAAITLTVQARQLLSGIVQQQSNLLKAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNTSWSNKSLDQIWDNMTWMEWEKEIDNYTGLIYTLIEESQNQQEKNELELLELDKWASLWNWFNITQWLWYIKIFIMIVGGLIGLRIVFAVLSLVNRVRQGYSPLSLQTLLPAPRGPDRPEGIEEEGGEQGRGRSIRLVNGFFALIWEDLRSLFLFSYRRLRDLLLIVA

Annotated regions:
phrase: MGSAAITLTVQARQLLSGIVQQQSNLLKAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNTSWSNKSLDQIWDNMTWMEWEKEIDNYTGLIYTLIEESQNQQEKNELELLELDKWASLWNWFNITQWLWYIKIFIMIVGGLIGLRIVFAVLSLVNRVRQGYSPLSLQ
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: VQARQLLSGIVQQQSNLLKAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNTSWSNKSLDQIWDNMTWMEWEKEIDNYTGLIYTLIEESQNQQEK
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: SSISSMEDQEVKNCSFNISTRGYNKGQKEEYAAFYKFDLVRIVENNNKSENSNTSFRLINCNTSVITQACPKVSFEPIPIHYCAPAGFAILRCNDKKFKGTGSCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSENFTNNAKTIIVQLKEAVRINCTRPNNNTRKSIHMGPGKAFYATDIIGDIRQAHCNLSKTEWNNTLQKVVEKLREQFENGTIVFKQSSGGDPEITMHSFNCGGEFFYCNTSQLFNSTWNGTNIKDNDTITLPCRIKQIINRWQEVGKAMYAPPIKGQIMCNSTITGLLLTRDGGTPNKSGPEIFRPGGGNMKDNWRSELFKYKVVKIEPLGIAPTKAKRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: LWVTVYYGVPVWKEATTTLFCASDAKSYDPEAHNVWATHACVPTDPNPQEVLLENVTENFNMWKNNMVEQMHEDIISLWDESLKPCVKLTPLCVPLNCTNW
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MAGKEEIIAKAKDSITEFDEEMAQEAANEALVAGLDPVEIIEHGYTAGMQYVGDQFEQGTLFLPHVLAAAEAMKAGIEVLQPEMEKRKAKTTTLGTVIIGTIEGDIHSIGKDIVASMLNIAGFEVVDLGRDVAIKTFVEKAKELKPDIVATSALMTTTMVNQIQLEEQLKEAGIRGQVKTMVGGAPVTQGWADKIGADIYGESATDAVNKIKAAIKS

Annotated regions:
phrase: LGTVIIGTIEGDIHSIGKDIVASMLNIAGFEVVDLGRDVAIKTFVEKAKELKPDIVATSALMTTTMVNQIQLEEQLKEAGIRGQVKTMVGGAPVTQGWADKIGADIYGESATDAVNKIKAAIK
type: DOMAIN
name: Cobalamin-bd
description: Cobalamin (vitamin B12)-binding domain

phrase: KAKDSITEFDEEMAQEAANEALVAGLDPVEIIEHGYTAGMQYVGDQFEQGTLFLPHVLAAAEAMKAGIEVLQPEMEKRKAKTTTLGTVIIGTIEGDIHSIGKDIVASMLNIAGFEVVDLGRDVAIKTFVEKAKELKPDIVATSALMTTTMVNQIQLEEQLKEAGIRGQVKTMVGGAPVTQGWADKIGADIYGESATD
type: DOMAIN
name: Corrinoid_p
description: Methyltransferase cognate corrinoid protein

phrase: MAGKEEIIAKAKDSITEFDEEMAQEAANEALVAGLDPVEIIEHGYTAGMQYVGDQFEQGTLFLPHVLAAAEAMKAGIEVLQPEMEKRKAKT
type: DOMAIN
name: Cbl-bd_cap
description: Cobalamin (vitamin B12)-binding module, cap domain

phrase: AKAKDSITEFDEEMAQEAANEALVAGLDPVEIIEHGYTAGMQYVGDQFEQGTLFLPHVLAAAEAMKAGIEV
type: DOMAIN
name: Cbl-bd_cap
description: Cobalamin (vitamin B12)-binding module, cap domain

phrase: EEIIAKAKDSITEFDEEMAQEAANEALVAGLDPVEIIEHGYTAGMQYVGDQFEQGTLFLPHVLAAAEAMKAGIEVLQPEMEKR
type: DOMAIN
name: Cbl-bd_cap
description: Cobalamin (vitamin B12)-binding module, cap domain

phrase: TVIIGTIEGDIHSIGKDIVASMLNIAGFEVVDLGRDVAIKTFVEKAKELKPDIVATSALMTTTMVNQIQLEEQLKEAGIRGQVKTMVGGAPVTQGWADKIGADIYGESATDA
type: DOMAIN
name: Cobalamin-bd
description: Cobalamin (vitamin B12)-binding domain
Protein sequence:
MDLPGPIHDILLVFLGSGLILGGLGVVLLTNPIYSAFSLGLVLVCISLFHIPSNSYFVAAAQLLIYVGAVNVLIVFAVMFMNGSEYSKDLYLWTVGDGVTSLVCTSILFSLITTISDTSWYGIIWTTRSNQIIEQDLTSNVQQIGIHLSTDFYLPFELISIILLVALIGAISMARQ

Annotated regions:
Protein sequence:
YINYKNMSHQHMLTLFNLLPVGSNISIWWNFGSMLLTCLMIQIATGFFLAIHYTANINLAFSSIIHISRDVPYGWIMQNTHAIGASLFFICIYIHIARGIYYGSYLNKEVWLSGTTLLIILMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGTTLTTWLWGGYAINDPTLTRFFALHFILPFAIISMSSIHILLLHNEGSNNPLGTNSDID

Annotated regions:
phrase: LPVGSNISIWWNFGSMLLTCLMIQIATGFFLAIHYTANINLAFSSIIHISRDVPYGWIMQNTHAIGASLFFICIYIHIARGIYYGSYLNKEVWLSGTTLLIILMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGTTLTTWLWGGYAINDPTLTRFFALHFILPFAIISMSSIHILLLHNE
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: YINYKNMSHQHMLTLFNLLPVGSNISIWWNFGSMLLTCLMIQIATGFFLAIHYTANINLAFSSIIHISRDVPYGWIMQNTHAIGASLFFICIYIHIARGIYYGSYLNKEVWLSGTTLLIILMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGTTLTTWLWGGYAINDPTLTRFFALHFILPFAIISMSSIHILLLHNEGSNNP
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: LPVGSNISIWWNFGSMLLTCLMIQIATGFFLAIHYTANINLAFSSIIHISRDVPYGWIMQNTHAIGASLFFICIYIHIARGIYYGSYLNKEVWLSGTTLLIILMATAFFGYVLPWGQMSFWAATVITNLLTAIPYLGTTLTTWLWGGYAINDPTLTRFFALHFILPFAIISMSSIHILLLHNEGS
type: DOMAIN
name: Cytochrome_b_N_euk/bac
description: Cytochrome b/b6, N-terminal domain, eukaryotic/bacterial
Protein sequence:
MATKEEKNKALAAALGQIEKQFGKGSIMKLGDTQALDVEAVSTGSLSLDVALGIGGLPMGRIVEIFGPESSGKTTLTLSVIAQAQKEGKTCAFIDAEHALDPIYAAKLGVNVNELLVSQPDNGEQALEICDALVRSGAVDVIIVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKLTGQIKNSNCLVVFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGEEVIGNETRVKVVKNKVAAPFRQVDFQILYGQGISKTGELIELGVKHKLVDKAGAWYAYNGEKIGQGKANAMKWLEEHPEEALALETKLRNELLANPEKVLAADIAEKNESSTGLEADY

Annotated regions:
phrase: KALAAALGQIEKQFGKGSIMKLGDTQALDVEAVSTGSLSLDVALGIGGLPMGRIVEIFGPESSGKTTLTLSVIAQAQKEGKTCAFIDAEHALDPIYAAKLGVNVNELLVSQPDNGEQALEICDALVRSGAVDVIIVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKLTGQIKNSNCLVVFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGEEVIGNETRVKVVKNKVAAPFRQVDFQILYGQGI
type: DOMAIN
name: RecA-like_N
description: RecA-like, N-terminal

phrase: DVEAVSTGSLSLDVALGIGGLPMGRIVEIFGPESSGKTTLTLSVIAQAQKEGKTCAFIDAEHALDPIYAAKLGVNVNELLVSQPDNGEQALEICDALVRSGAVDVIIVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKLTGQIKNSNCLVVFINQ
type: DOMAIN
name: RecA_ATP-bd
description: DNA recombination and repair protein RecA-like, ATP-binding domain

phrase: GELIELGVKHKLVDKAGAWYAYNGEKIGQGKANAMKWLEEHPEEALALETKLRNE
type: DOMAIN
name: RecA-like_C
description: RecA-like, C-terminal

phrase: ALKFYASV
type: CONSERVED_SITE
name: DNA_recomb/repair_RecA_CS
description: DNA recombination/repair protein RecA, conserved site

phrase: GVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGEEVIGNETRVKVVKNKVAAPFRQVDFQILYGQGISKTG
type: DOMAIN
name: RecA_monomer-monomer_interface
description: DNA recombination and repair protein RecA, monomer-monomer interface

phrase: MGRIVEIFGPESSGKTTLTLSVIAQAQKEGKTCAFIDAEHALDPIYAAKLGVNVNELLVSQPDNGEQALEICDALVRSGAVDVIIVDSVAALTPKAEIEGEMGDSHMGLQARLMSQALRKLTGQIKNSNCLVVFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRT
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain
Protein sequence:
MAVGKNKRLTKGKKGTKKKIIDPFTKKDWYDVKAPSMFAVRNIGKTLVTRTQGKKLASDGLKGRVFEVSLADLQNDEQSFRKFRLISEDIQGKNVLTNFHGMTMTTDKLRALVKKWQTLIEANVDVKTTDGYLLRLFCIGFTKRQPNQIKKTSYAKSSQCRSIRKKMVDVMTREVSQIDLKETVNKLIPDSIGKDIEKKCQSIYPLHDVFVRKVKVLKKPKFDIGRLMDLHGESAGGKGATDTFEPPVQESV

Annotated regions:
phrase: LKGRVFEVSLAD
type: CONSERVED_SITE
name: Ribosomal_eS1_CS
description: Small ribosomal subunit protein eS1, conserved site
Protein sequence:
MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKELRRVVEPLITLAKTDSVANRRLAFARTRDNEVVAKLFTVLGPRFASRAGGYTRILKCGFRAGDNAPMAYIELVDRADSETEAAAE

Annotated regions:
phrase: IKTTLPKAKELRRVVEPLITLA
type: CONSERVED_SITE
name: Ribosomal_bL17_CS
description: Large ribosomal subunit protein bL17, conserved site
Protein sequence:
MNKRLRDAVKKGNLFIPFITAGDPVREATIALALSLQRSGADVLELGIPYSDPLADGPVIQNASKRALAGGMTLAKAMALVPEMRKEGLTIPVIVFTYANPLLQFGFERFCETACDYGIDGLLVPDLPFEESETLANECEKQGLALISLVAPTSQQRIKAIASRAQGFLYCVSSLGVTGARKTLHPQVEAFLKLVKEASPVPFVVGFGISSYEQVEEMGRHADGVVIGSAIVEQIGLRCEALKQAESRDEAVKEIEQYVNSLLHPAPTY

Annotated regions:
phrase: LELGIPYSDPLAD
type: ACTIVE_SITE
name: Trp_synthase_alpha_AS
description: Tryptophan synthase, alpha chain, active site
Protein sequence:
MLIALELSTIWTIALPPITGAIIGYFTNDIAIKMLFRPYKARYIFKRRLPFTPGLIPRNQERLAKRVSDTIMGSLLTPEEIQNLARRLLKTERVQSAILWLLQLAIKQIRADKEQKTAKILAGILSDLFGQSLPRLLKVLARRDDFLEAQINQIFDRILLEFRLTDLQARQLADWLLDTVISPDILRQLLIDFLTDRNIQVIDEGFREKTSGTYWVVANIFGLRNTLTRLRTFCLDEKETANTRLKELLLSLEMRTRLREWLQNLSLQNLPISTVRQLRKTTRDTVRSYIQQSGAQFLQDFNQSIDWEKLAIVVVNRLQASTVVTDSLEMISQELALILERYLEEDLERIVSQAIPILSIDQIIIEKIVATSPKELEAATEGIVKNELQAIVNLGGILGFFVGTIQTVILLLR

Annotated regions:
Protein sequence:
MKTDVGFIGWRGMVGSVLMQRMRETGDFGRIEPVFFSTSRPLPKPPDIDRAVAPVADAHDIERLKALPVLVSCQGGDYTSEVHPRLRAAGWKGYWIDAASPLRMKDDATIVLDPVNRPVIDQALAAGGRDYIGGNCTVSLMLMGLAGLFKEDLVEWATAMTYQAASGAGAQHMHELLDQMGELHEAARPALGDPAARILDIDKTVHAAMRRADFPRQHFEHPLAGSVLPWIDKDLGNGQSREEWKAQAEANKILGKRNGSEVILDGICVRIGTMRCHSQALTIKLRRDLPLPEIESLIAGGNEWVKVVPNEKAATLNELTPAAVSGSLDIPVGRLRKLPMGGEYLTAFTVGDQLLWGAAEPLRRMLEVLHTR

Annotated regions:
phrase: DVGFIGWRGMVGSVLMQRMRETGDFGRIEPVFFSTSRPLPKPPDIDRAVAPVADAHDIERLKALPVLVSCQGGDYTSEVHPRLRAAGWKGYWIDAASPLRMKDDATIVLDPVNRPVIDQ
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: VGFIGWRGMVGSVLMQRMRETGDFGRIEPVFFSTSRPLPKPPDIDRAVAPVADAHDIERLKALPVLVSCQGGDYTSEVHPRLRAAGWKGYWIDAASPLRMKDDATIVLDPVNRPVIDQ
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: LAGLFKEDLVEWATAMTYQAASGAGAQHMHELLDQMGELHEAARPALGDPAARILDIDKTVHAAMRRADFPRQHFEHPLAGSVLPWIDKDLGNGQSREEWKAQAEANKILGKRNGSEVILDGICVRIGTMRCHSQALTIKLRRDLPLPEIESLIAGGNEWVKVVPNEKAATLNELTPAAVSGSLDIPVGRLRKLPMGGEYLTAFTVGDQLL
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: LDGICVRIGTMRCH
type: CONSERVED_SITE
name: Asp-semialdehyde_DH_CS
description: Aspartate-semialdehyde dehydrogenase, conserved site
Protein sequence:
MNIIQQLEAEQAAKIAAKRTLPEFSPGDTVRVNVRVVEGTRTRVQAYEGVCIARSGGGINESFTVRKISYGEGVERVFPVYSPLVESVDVVRRGKVRRAKLYYLRDRRGKSARIVENTGTRARKLNDAERQAISEEKARIEAEKVAAAQALAAEKAAAEAAEAKAAEEAKAAEAAAE

Annotated regions:
phrase: VVRRGKVRRAKLYYL
type: CONSERVED_SITE
name: Ribosomal_bL19_CS
description: Large ribosomal subunit protein bL19, conserved site
Protein sequence:
MSKIANVIGFEVMDSRGNPTVMAEVVLESGVVGTACAPSGASTGSREALELRDGDKSRYLGKGVLKAVANINETIKPLLVGKDVAAQRELDDIMLKADGTENKANLGANAILAVSLAAAKAAAQDKGIPLYAHIADINGTPGKYTMPVPMMNIINGGEHADNNVDIQEFMIQPVSAPNFTEALRMGAEVFHSLKKVLAGRGLNTAVGDEGGFAPNLPSNEAALEAIAEAVAAAGYKLGEEITLALDCASSEFYKDGVYDMSGEGKKFSPEEFADYLAELASKYPILSIEDGMDESDWDGWKVLTEKIGSTCQLVGDDLFVTNTKILKEGIDKSIANSILIKFNQIGSLSETLDAIKMAQEAGYTAVISHRSGETEDTTIADLAVATAAGQIKTGSLSRSDRVAKYNRLLRIEAELGEKAPYRGRAEFK

Annotated regions:
phrase: IANVIGFEVMDSRGNPTVMAEVVLESGVVGTACAPSGASTGSREALELRDGDKSRYLGKGVLKAVANINETIKPLLVGKDVAAQRELDDIMLKADGTENKANLGANAILAVSLAAAKAAAQDKGIPLYAH
type: DOMAIN
name: Enolase_N
description: Enolase, N-terminal

phrase: KYTMPVPMMNIINGGEHADNNVDIQEFMIQPVSAPNFTEALRMGAEVFHSLKKVLAGRGLNTAVGDEGGFAPNLPSNEAALEAIAEAVAAAGYKLGEEITLALDCASSEFYKDGVYDMSGEGKKFSPEEFADYLAELASKYPILSIEDGMDESDWDGWKVLTEKIGSTCQLVGDDLFVTNTKILKEGIDKSIANSILIKFNQIGSLSETLDAIKMAQEAGYTAVISHRSGETEDTTIADLAVATAAGQIKTGSLSRSDRVAKYNRLLRIEAELGEKAPYRGRAEF
type: DOMAIN
name: Enolase_C
description: Enolase, C-terminal TIM barrel domain

phrase: IANVIGFEVMDSRGNPTVMAEVVLESGVVGTACAPSGASTGSREALELRDGDKSRYLGKGVLKAVANINETIKPLLVGKDVAAQRELDDIMLKADGTENKANLGANAILAVSLAAAKAAAQDKGIPLYAH
type: DOMAIN
name: Enolase_N
description: Enolase, N-terminal

phrase: YTMPVPMMNIINGGEHADNNVDIQEFMIQPVSAPNFTEALRMGAEVFHSLKKVLAGRGLNTAVGDEGGFAPNLPSNEAALEAIAEAVAAAGYKLGEEITLALDCASSEFYKDGVYDMSGEGKKFSPEEFADYLAELASKYPILSIEDGMDESDWDGWKVLTEKIGSTCQLVGDDLFVTNTKILKEGIDKSIANSILIKFNQIGSLSETLDAIKMAQEAGYTAVISHRSGETEDTTIADLAVATAAGQIKTGSLSRSDRVAKYNRLLRIEAELGEKAPYRGRAE
type: DOMAIN
name: Enolase_C
description: Enolase, C-terminal TIM barrel domain

phrase: ILIKFNQIGSLSE
type: CONSERVED_SITE
name: Enolase_CS
description: Enolase, conserved site
Protein sequence:
MGPSQPASTCVHLAPSLQLDAMSDPRNLQPQNQLQFNRNVPTNPRNLAVRYSCPHGIKIEKLKHSYNELNHGKDLDFKAGNELSSSVSFSVISEERLSYAVHLAKRDVKRRQFEEHVKDHLRSLPHSSHKGMHTKVERKDSKSQDVCHCSHQPSRVSLSSSGAKVYVYTSQPGRSDLTVPNSPPTHDPGLQLQPRIEENKNLWEQKGLLEVQRLQKELSGCIRKIEALTKKDRLEEALDPDEEHRIRVRRQEQAVRCARMLYVLQQQVKEIQEELDKLSPQKIKHTKKSWAVSRLAAAHRAAIRALQVFVTQFTDRGEHPVPARCRELGSLIRQLSLCSAKLDADPSVPDVVIDILQQIEALESLLEKKLSPKKAKKCFTEIRSRFPVGSQKILERWPTVLPKSERRHLVTKETFPQETSRPPVAKRLLAAMCQPDGELQRLESEPDVLDAHLLPEEAPRIEDNGTDFKDGTLTPAKPQAVRRKALTGSMPIRKKDTVESARPQQGLHIAERNRPNQPYSKSRLQQTTVSSRLKMNRQPMKDHRAPWIPPNPTSPPASPKCAAWMKVKYSPRDAAKEQSLQQEDIHKESQLRGDAEQEAARLSWPDAESSKRLKELEELEAKEMERKQKQRLNWLEAETSRRTKELDELKAEEMDRLQKLSVSATQLADKVEEAVLERLKPLLIKAQRVNSSVEANSHLKDRPSRHAAAAAQPAEQASDVPFESRNIPQLRDCLEDTAHELWARTQDKILGSETSARLGDSKDSPDLETMMLRMEEMEKYQETVRQRYNKIVYADPHLWMHEERNDQNTPAVSEGPLASHPIKITKTATQKCPAVNILLERPCNANSLDESVTTEEGSEKREAPLPLSREDLHQRKGQTPLSVPPRMRHSIGAYCSRFEQFLRIIAHEAIGSFNPWLIAESFSDELVDEALGAVAAELQDVCEDYAEAVFTSEFLEAAA

Annotated regions:
Protein sequence:
MLVLGIETSCDETGIALYDGERGLLAHTLYSQIKLHADYGGVVPELASRDHVRKVIPLIEEVLNQAGVGKSDIDAIAYTAGPGLVGALMVGGAIASALAYALGIPTIGVHHMEGHLLAPMLEENPPEFPFVALLVSGGHTQLVRVDGVGEYELLGESVDDAAGEAFDKVAKMLGLDYPGGPQVAKLAEEGNLQRFKFPRPMTDRPGLDFSFSGLKTFTLNTLQEAEASGGVDDNLRADVAACFQEAVVETMVIKCRRALRQTGLKRLIMAGGVSANRRLREKLQQMVKGEKALVYYARPEFCTDNGAMIAYAGHQRLAVGQRGDLSVLATPRWPLVELPSIKG

Annotated regions:
phrase: MLVLGIETSCDETGIALYDGERGLLAHTLYSQIKLHADYGGVVPELASRDHVRKVIPLIEEVLNQAGVGKSDIDAIAYTAGPGLVGALMVGGAIASALAYALGIPTIGVHHMEGHLLAPMLEENPPEFPFVALLVSGGHTQLVRVDGVGEYELLGESVDDAAGEAFDKVAKMLGLDYPGGPQVAKLAEEGNLQRFKFPRPMTDRPGLDFSFSGLKTFTLNTLQEAEASGGVDDNLRADVAACFQEAVVETMVIKCRRALRQTGLKRLIMAGGVSANRRLREKLQQMVKGEKALVYYARPEFCTDNGAMIAYAGHQRLAVGQRGDLSVLATPRWPLV
type: DOMAIN
name: Gcp-like_dom
description: Gcp-like domain

phrase: LLAHTLYSQIKLHADYGGVVPELASRDHVRKVIPLIEEVLNQAGVGKSDIDAIAYTAGPGLVGALMVGGAIASALAYALGIPTIGVHHMEGHLLAPMLEENPPEFPFVALLVSGGHTQLVRVDGVGEYELLGESVDDAAGEAFDKVAKMLGLDYPGGPQVAKLAEEGNLQRFKFPRPMTDRPGLDFSFSGLKTFTLNTLQEAEASGGVDDNLRADVAACFQEAVVETMVIKCRRALRQTGLKRLIMAGGVSANRRLREKLQQMVKGEKALVYYARPEFCTDNGAMIA
type: DOMAIN
name: Gcp-like_dom
description: Gcp-like domain