nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MHPRYSPAPPLQQQQQQHQQMTGIGGPGGLLRGPANNSQQLPPQMPRSQNYANGSSSSAAAASAVTAAPPTPRSAFPVAPLTASAVALKGAIPQRPPAMTSPAAAAAGAALAAGAPYRGATSWTPQGYAPAAAAAAAAVAQQAAAYRYTAPLPQPAYAAYTPHTATTPATTTYGQRVPTAASPSNTNSSSSSNTGSQSGTLSTSLSHTTNTNTNMGPNGTAQNQNQQGGGGEQLSKTNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKCKGYGFVDFEQPAYAENAVKGLQAKGVQAQMAKQQEQDPTNLYIANLPPHFKETDLEAMLSKYGQVVSTRILRDQQMNSKGVGFARMESREKCEQIIQMFNGNTIPGAKDPLLVKFADGGPKKKNLFKTPDPNTRAWRDVSAEGIPVAYDPTLQQNGVSVNVGTPIGVPYSRFSAPPVGGYPVAGSQWIPGYMMTQPITQVDDQYMQMAAPQLGVTSYKPEAVNQVQPRGISMMVSGDTGVPYGTMMPQLATLQIGNSYISPTYPYYAPPPTIIPTMPMTDSEQASTAASPDEAYTQYPHQAAPK

Annotated regions:
phrase: NLYIANLPPHFKETDLEAMLSKYGQVVSTRILRDQQMNSKGVGFARMESREKCEQIIQMFNGNTIPGAKDPLLV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: NLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKCKGYGFVDFEQPAYAENAVKGLQAKGVQA
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: LYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKCKGYGFVDFEQPAYAENAVKGLQA
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: LYIANLPPHFKETDLEAMLSKYGQVVSTRILRDQQMNSKGVGFARMESREKCEQIIQMFNGNTIPG
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: TNLYIANLPPHFKETDLEAMLSKYGQVVSTRILRDQQMNSKGVGFARMESREKCEQIIQMFNGNTIPGAKDPLLVKFAD
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: TNLYIRGLQQGTTDKDLVNMCAQYGTIISTKAILDKTTNKCKGYGFVDFEQPAYAENAVKGLQAKGVQAQMAK
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain
Protein sequence:
MQAKTFLLGAALAGVALAAHAEDGTIVITGTITDQTCTIEDPSPGYIKVVHLPTISKSALKNAGDVAGRTRFDIKLKDCPTTVNTLKLYFEPGPTTDYGTKDLKAYKQAWYVDAATLLKSPPSVTEAKGVQIRLMNLNGKQIPMGETEPNQHAAAFSGTMQAGQAKKSFTLHYLAGYVKKASGEVEATMLTTYVGFSVVYP

Annotated regions:
Protein sequence:
MTDLRPTTTRVLLIISGGIAAYKSLELIRLLTAHGIAVRCVLTRGGAQFVTPLSLAALSGDTVYEDLFSLTDERTMGHIELSRDADLLLVAPATADILAKMRAGLADDLATTALLATDKPVMAAPAMNVRMWDHPATQENIQALRDRCISIIGPEEGDMACGEYGMGRMTEPGDILAAVLDRLKLAPINGEGTSPGRLAGKKAIVTSGPTHEPLDPVRYITNRSSGRQGHAIAAALAAEGAETILISGPTVLADPLGVTVSKVASARDMMEACTDALPADILVCAAAVADWRAADPASEKIKKNGKPPLFDLVENPDILASLSQAGDSRPALVVGFAAETGAVVEKAQAKRARKGCDWIIANDVSPGIDTFGSMTNTVHMVDGKTVENWPTMTKEQVGEQLAGRIADHFK

Annotated regions:
phrase: LAGKKAIVTSGPTHEPLDPVRYITNRSSGRQGHAIAAALAAEGAETILISGPTVLADPLGVTVSKVASARDMMEACTDALPADILVCAAAVADWRAADPASEKIKKNGKPPLFDLVENPDILASLSQAGDSRPALVVGFAAETGAVVEKAQAKRARKGCDWIIANDVSPGIDTFGSMTNTVH
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal

phrase: RVLLIISGGIAAYKSLELIRLLTAHGIAVRCVLTRGGAQFVTPLSLAALSGDTVYEDLFSLTDERTMGHIELSRDADLLLVAPATADILAKMRAGLADDLATTALLATDKPVMAAPAMNVRMWDHPATQENIQALRDRCISIIGPEEGDMACGEYGMGRMTEPGDILAAVLDR
type: DOMAIN
name: Flavoprotein
description: Flavoprotein
Protein sequence:
MKRSLHLTFVCLSLFSARMCVQGNQFNIEVSRSNKLSLPGFENLTAGYNKFLRPNFGGEPVQIALTLDVASISSISESNMDYTATIYLRQRWTDQRLVFEGNKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGNDSVRGLENLRLAQYTIQQYFTSVTRSQQETGNYTRLVLQFELQRNVLYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYSSLQQMAAKDRGKAKEVEEVNITNIINSSISSFKRKISFASIEISGDNVDYSDLTMKTSDKVKFVFRDKLGRIVDYFTIQNPSNVDRYSKLLFPLIFMLANVFYWAYYMYF

Annotated regions:
phrase: TYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYSSLQQMAAKDR
type: DOMAIN
name: Neurotrans-gated_channel_TM
description: Neurotransmitter-gated ion-channel transmembrane domain

phrase: CNMDLSKYPMDTQT
type: CONSERVED_SITE
name: Neurotransmitter_ion_chnl_CS
description: Neurotransmitter-gated ion-channel, conserved site

phrase: ENLTAGYNKFLRPNFGGEPVQIALTLDVASISSISESNMDYTATIYLRQRWTDQRLVFEGNKSFTLDARLVEFLWVPDTYIVESKKSFLHEVTVGNRLIRLFSNGTVLYALRITTTVACNMDLSKYPMDTQTCKLQLESWGYDGNDVEFSWLRGNDSVRGLENLRLAQYTIQQYFTSVTRSQQETGNYTRLVLQFELQR
type: DOMAIN
name: Neur_chan_lig-bd
description: Neurotransmitter-gated ion-channel ligand-binding domain

phrase: LYFILETYVPSTFLVVLSWVSFWISLDSVPARTCIGVTTVLSMTTLMIGSRTSLPNTNCFIKAIDVYLGICFSFVFGALLEYAVAHYSSLQQMAAKDRGKAKEVEEVNITNIINSSISSFKRKISFASIEISGDNVDYSDLTMKTSDKVKFVFRDKLGRIVDYFTIQNPSNVDRYSKLLFPLIFMLANVFYWAYYMY
type: DOMAIN
name: GABAAR_pi_TM
description: Gamma-aminobutyric acid receptor subunit pi, transmembrane domain
Protein sequence:
MTRINDKGVNLAVLGATGQVGMVMRSILAERNFPVKDLRFMASARSAGQVINYEGHDVVVEDVATADLSGIDIAIFSAGGGTSKTWAPQFAKAGAYVIDNSSQWRMHDDVPLVVAEVNPEDLDDVPSHIIANPNCTTMAAMPAVKALHENFGLTRLVASSYQAVAGAGRDGVLQLMNEAQTALDQGADKLVFDGSAIDFPAPTKIVKTIAFNAVPFIGSIVDDGSEETDEEQKWRNESRKILHIPGLRAACTCVRVGVFTSHGMSIQAEFEKDVTPDMAREVLKDAPGVELMDVPTPMEAAGRDPSFVGRIRQDQSVEGKKGLSFFIANDNLRKGAALNAIEIAEVMVSKHFADRL

Annotated regions:
phrase: KALHENFGLTRLVASSYQAVAGAGRDGVLQLMNEAQTALDQGADKLVFDGSAIDFPAPTKIVKTIAFNAVPFIGSIVDDGSEETDEEQKWRNESRKILHIPGLRAACTCVRVGVFTSHGMSIQAEFEKDVTPDMAREVLKDAPGVELMDVPTPMEAAGRDPSFVGRIRQDQSVEGKKGLSFFIANDNLR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: NLAVLGATGQVGMVMRSILAERNFPVKDLRFMASARSAGQVINYEGHDVVVEDVATADLSGIDIAIFSAGGGTSKTWAPQFAKAGAYVIDNSSQWRMHDDVPLVVAEVNPEDLDD
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: LAVLGATGQVGMVMRSILAERNFPVKDLRFMASARSAGQVINYEGHDVVVEDVATADLSGIDIAIFSAGGGTSKTWAPQFAKAGAYVIDNSSQWRMHDDVPLVVAEVNPEDLD
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MIITVNSPIASRLDKYLRRLYPLLTQGVIEKALRQKQIIVNSKKAEASLRVVEGDEIFIHDKFNLPIAQPTKLVFTDAEITLAKKITTEYLIYEDDNIIAINKPAGLATQGGSKINLSVDSALKYLNSQGADFKLVHRLDKETSGLLLIAKNYVSSVKLHDAFKEKLVEKTYLAVTYGKPIKDQGEVKTNIEKSKGSIPKITDINDNNGKLAITYYKLLKSLTNNLFLVEFIPITGRMHQLRLHAKLLGCPIFGDNKYGNDKLMPYSKYMFLHANNIVLSKKVFGKEVNLEAKLPSYFNRV

Annotated regions:
phrase: RLDKYLRRLYPLLTQGVIEKALRQKQIIVNSKKAEASLRVVEGDE
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: NIIAINKPAGLATQGGSKINLSVDSALKYLNSQGADFKLVHRLDKETSGLLLIAKNYVSSVKLHDAFKEKLVEKTYLAVTYGKPIKDQGEVKTNIEKSKGSIPKITDINDNNGKLAITYYKLLKSLTNNLFLVEFIPITGRMHQLRLH
type: DOMAIN
name: PsdUridine_synth_RsuA/RluA
description: Pseudouridine synthase, RsuA/RluA-like

phrase: VHRLDKETSGLLLI
type: CONSERVED_SITE
name: PsdUridine_synth_RluA-like_CS
description: Pseudouridine synthase, RluA-like, conserved site

phrase: IIAINKPAGLATQGGSKINLSVDSALKYLNSQGADFKLVHRLDKETSGLLLIAKNYVSSVKLHDAFKEKLVEKTYLAVTYGKPIKDQGEVKTNIEKSKGSIPKITDINDNNGKLAITYYKLLKSLTNNLFLVEFIPITGRMHQLRLHAKLLGCPIFGDNKYGNDKLMPYSKYMFLHANNIV
type: DOMAIN
name: PsdUridine_synth_RsuA/RluA
description: Pseudouridine synthase, RsuA/RluA-like

phrase: SRLDKYLRRLYPLLTQGVIEKALRQKQIIVNSKKAEASLRVVEGDEIFIHDKFNL
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain
Protein sequence:
MSSLLYIFLLLAVFISHRGVTTEAAVEPVKDINGKSLLTGVNYYILPVIRGRGGGLTMSNLKTETCPTSVIQDQFEVSQGLPVKFSPYDKSRTIPVSTDVNIKFSPTSIWELANFDETTKQWFISTCGVEGNPGQKTVDNWFKIDKFEKDYKIRFCPTVCNFCKVICRDVGVFVQDGKRRLALSDVPLKVMFKRAY

Annotated regions:
Protein sequence:
MDIQMANNFTPPSATPQGNDCDLYAHHSTARIVMPLHYSLVFIIGLVGNLLALVVIVQNRKKINSTTLYSTNLVISDILFTTALPTRIAYYAMGFDWRIGDALCRITALVFYINTYAGVNFMTCLSIDRFIAVVHPLRYNKIKRIEHAKGVCIFVWILVFAQTLPLLINPMSKQEAERITCMEYPNFEETKSLPWILLGACFIGYVLPLIIILICYSQICCKLFRTAKQNPLTEKSGVNKKALNTIILIIVVFVLCFTPYHVAIIQHMIKKLRFSNFLECSQRHSFQISLHFTVCLMNFNCCMDPFIYFFACKGYKRKVMRMLKRQVSVSISSAVKSAPEENSREMTETQMMIHSKSSNGK

Annotated regions:
phrase: GNLLALVVIVQNRKKINSTTLYSTNLVISDILFTTALPTRIAYYAMGFDWRIGDALCRITALVFYINTYAGVNFMTCLSIDRFIAVVHPLRYNKIKRIEHAKGVCIFVWILVFAQTLPLLINPMSKQEAERITCMEYPNFEETKSLPWILLGACFIGYVLPLIIILICYSQICCKLFRTAKQNPLTEKSGVNKKALNTIILIIVVFVLCFTPYHVAIIQHMIKKLRFSNFLECSQRHSFQISLHFTVCLMNFNCCMDPFI
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM
Protein sequence:
MFVRNTASVVRGTSRNYATLREIETRLKSIKNIEKITKTMKIVASTRLSKAERAKNSAKEYALADAAFYKNAETVPLEDAEKKDLIIAITSDKGLCGSIHSQLAKAVRLQLKQTPNADVVAIGDKVKGQLLRTNSDNLKFAFNGVGKEAPTFEETSLIANKILEGGASNYKKVSIFWNDPISSLSFEPSNKPVFNAAAIEQSPSFSKFEIDADNNVSQDLFEFTLSNEILAAMAEGYAAEVSARRNAMDNASKNAGDMINSYSILYNRTRQAVITNELVDIITGASSLD

Annotated regions:
phrase: ITNELVDIITGAS
type: CONSERVED_SITE
name: ATP_synth_F1_gsu_CS
description: ATP synthase, F1 complex, gamma subunit conserved site
Protein sequence:
MQAFTQHEGLVAPLDRENVDTDLIIPKQFLKSIKRAGFGPNLFDELRYLDHGEPGMDNSKRPLNPDFVLNQPRYQGASVLLARKNFGCGSSREHAPWALTQYGFRAIIAPSYADIFFNNSFKNGLLPIVLGELEVARLFDEVKAFPGFKLNIDLERQVVIAPDGRELGFDIEPFRKYCLLNGLDDIGLTLRQADKIRAFEAERLARHPWLESRPVA

Annotated regions:
phrase: MQAFTQHEGLVAPLDRENVDTDLIIPKQFLKSIKRAGFGPNLFDELRYLDHGEPGMDNSKRPLNPDFVLNQPRYQGASVLLARKNFGCGSSREHAPWALTQYGFRAIIAPSYADIFFNNSFKNGLLPIV
type: DOMAIN
name: AconitaseA/IPMdHydase_ssu_swvl
description: Aconitase A/isopropylmalate dehydratase small subunit, swivel domain

phrase: LDRENVDTDLIIPKQFLKSIKRAGFGPNLFDELRYLDHGEPGMDNSKRPLNPDFVLNQPRYQGASVLLARKNFGCGSSREHAPWALTQYGFRAIIAPSYADIFFNNSFKNGLLPIVLGELEVARLFDEVKAFPGFKLNID
type: DOMAIN
name: IPMI_Swivel
description: 3-isopropylmalate dehydratase, swivel domain
Protein sequence:
MNSAEIMADLSNHTPMMQQYLKVKKDYQHALLFYRMGDFYELFFEDAHLAAKLLGITLTHRGKANGNPIPMAGVPYHSAEGYLARLVKAGRTVAICEQVGEVTGKGPVERKVVRILTPGTLTDDALLTSYQSSNLVALCIHQNQIGFALLDLSAGIFKVQQQDYKPEQLPIELARLMPSEILIDEDLVDPNIIEQIKKHLDCPVTKRPNVDFNLNNAQKTLCDQFSVSTLSGFGLDPLPLAKAAAAALIHYAKETQKTALPHIRSILLEQSSDFIALDPITRRNLEIIEPLFEHGTSLFQLVNDCQTAMGGRLLSRTLMQPVRDTALLDARLDAIEQLIQGYHESPVRLVLKEIGDIERVLSRVALGSARPRDLVQLRHACAQIPFLRNALAPVVQAKKSKLLGQLDQELGDFKSLHQHLMAAIVENPPVLLRDGNVIAEGYDAELDELRQIRDHAGQFLIDLEIKERERTGISTLKIGYNRVSGYYIELTRAQAEQAPADYIRRQTLKNAERYITPELKSFEDKVLSSESRALAREKALFEALLENLRENIAHLQMMSSAIAQIDVIANFAHQARLNNWARPEFTPETGIKIQGGRHPVVEALSKAPFTPNDTFLDVQHRMAIITGPNMGGKSTFMRQTALISLLAYCGSYVPARAAKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLVLMDEVGRGTSTYDGLSLAWACVVDLTKRVKCLCLFATHYFELTELGSEPGIDNYHVTAQELNGNLILLHKVQQGPASQSHGLQVAKLAGIPANVIKEAQKRLRILEKQQQQHLQTSVQSDLFATLDSEVTPSTQVIEKVIEVEVSSPALDLLKQIEVDNLTPRQALEQLYELKAALNS

Annotated regions:
phrase: SLVLMDEVGRGTSTYD
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: LVALCIHQNQIGFALLDLSAGIFKVQQQDYKPEQLPIELARLMPSEILIDEDLVDPNIIEQIKKHLDCPVTKRPNVDFNLNNAQKTLCDQFSVSTLSGFGLDPLPLAKAAAAALIHYAKETQKTALPHI
type: DOMAIN
name: DNA_mmatch_repair_MutS_con_dom
description: DNA mismatch repair protein MutS, connector domain

phrase: EHGTSLFQLVNDCQTAMGGRLLSRTLMQPVRDTALLDARLDAIEQLIQGYHESPVRLVLKEIGDIERVLSRVALGSARPRDLVQLRHACAQIPFLRNALAPVVQAKKSKLLGQLDQELGDFKSLHQHLMAAIVENPPVLLRDGNVIAEGYDAELDELRQIRDHAGQFLIDLEIKERERTGISTLKIGYNRVSGYYIELTRAQAEQAPADYIRRQTLKNAERYITPELKSFEDKVLSSESRALAREKALFEALLENLRENIAHLQMMSSAIAQIDVIANFAHQARLNNWARPEFTPETGIKIQGGRHPVVEA
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: IITGPNMGGKSTFMRQTALISLLAYCGSYVPARAAKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLVLMDEVGRGTSTYDGLSLAWACVVDLTKRVKCLCLFATHYFELTELGSEPGIDNYHVTAQELNGNLILLHKVQQGPASQSHGLQVAKLAGIPANVIKEAQKRLRI
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: HRMAIITGPNMGGKSTFMRQTALISLLAYCGSYVPARAAKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLVLMDEVGRGTSTYDGLSLAWACVVDLTKRVKCLCLFATHYFELTELGSEPGIDNYHVTAQELNGNLILLHKVQQGPASQSHGLQVAKLAGIPANVIKEAQKRL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: TRRNLEIIEPLFEHGTSLFQLVNDCQTAMGGRLLSRTLMQPVRDTALLDARLDAIEQLIQGYHESPVRLVLKEIGDIERVLSRVALGSARPRDLVQLRHACAQIPFLRNALAPVVQAKKSKLLGQLDQELGDFKSLHQHLMAAIVENPPVLLRDGNVIAEGYDAELDELRQIRDHAGQFLIDLEIKERERTGISTLKIGYNRVSGYYIELTRAQAEQAPADYIRRQTLKNAERYITPELKSFEDKVLSSESRALAREKALFEALLENLRENIAHLQMMSSAIAQIDVIANF
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: GYDAELDELRQIRDHAGQFLIDLEIKERERTGISTLKIGYNRVSGYYIELTRAQAEQAPADYIRRQTLKNAERYITPELKSFEDKVLSSE
type: DOMAIN
name: DNA_mismatch_repair_MutS_clamp
description: DNA mismatch repair protein MutS, clamp

phrase: TPMMQQYLKVKKDYQHALLFYRMGDFYELFFEDAHLAAKLLGITLTHRGKANGNPIPMAGVPYHSAEGYLARLVKAGRTVAICEQVGEVTGKGPVERKVVRILTPGTLTD
type: DOMAIN
name: DNA_mismatch_repair_MutS-lik_N
description: DNA mismatch repair protein MutS-like, N-terminal
Protein sequence:
MGALLAKWRAKPSTVEVLEKMEKDIQSLEEFRDKNQKLRKIWVARLFFYSTILYILTSLTVYLWYLPDGMTARLLTMLLFLSFPVLIWFVRTLLILWFSRRTERNNDALELLKTEKKKILEEVMEKETYKAAKLILERFDPDSRKIKELELPVPGPPITPRPGQDLRQRTAAQRNISVSTPVNPGQESPQVPGLLAATPSLQRDTSAPGGPPERSVQPTPQSNILQRRPGSPATTVSGMAIHPPGPPLARPILPRERGAMDRVIEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYVAFRCAYCYFLNPARKTRPQAPRLQEINFDRQRQRTDSQGSVSSVQPPAAEQLENPQSPEAMEEDSPAQAEEQAIEEDSTCSEQQWEEAPDDSEKDPSPVAELNPSESNPSPPAANETEESFMETE

Annotated regions:
phrase: MDRVIEYLVGDGPQNRYALICQQCFSHNGMALKEEFEYVAFRCAYCYFL
type: DOMAIN
name: Lunapark_Znf
description: Lunapark zinc ribbon domain
Protein sequence:
MSRIGRKSIPVPAGVDVTIDGQTVKVKGPKGELSHTLAEPITVERAEDGQLNVARPNDERKAKELHGLSRTLVANMIVGVTEGYRKSLEIAGTGYRVTAKGKDLEFALGFSHPVTVVAPEGITFSVEKPTLFHVAGINKQLVGEVAANIRKIRPPEPYKGKGVKYQGEVIRRKAGKAGKK

Annotated regions:
phrase: PEPYKGKG
type: CONSERVED_SITE
name: Ribosomal_uL6_CS
description: Large ribosomal subunit protein uL6, conserved site

phrase: VPAGVDVTIDGQTVKVKGPKGELSHTLAEPITVERAEDGQLNVARPNDERKAKELHGLSRTLVANMIVGVTE
type: DOMAIN
name: Ribosomal_uL6_a/b-dom
description: Large ribosomal subunit protein uL6, alpha-beta domain

phrase: GTGYRVTAKGKDLEFALGFSHPVTVVAPEGITFSVEKPTLFHVAGINKQLVGEVAANIRKIRPPEPYKGKGVK
type: DOMAIN
name: Ribosomal_uL6_a/b-dom
description: Large ribosomal subunit protein uL6, alpha-beta domain
Protein sequence:
MTGRNQHNGFQFATAVQPATGAYMSAFGNNSETEYSEEDGEAFELRSRGRERHHRSTSRDRKDDIVYLIREIKEGDTLISISLQYFCTVADIKRANNLLTEQDFFALRSLRIPVRKFSSFTETHNTAPHKSSSPSGTCRITETPVSGASLDSTSSSSSADSVECFLQEKDKDIQQLVKSSAPSRNSLSEVVSSLEQPLLGDAERRPAIKKDPYYGADWGMRWWTAVAIMLVVGIVTPVFYLLYYEVLMKADVSHHTTIDSIRPGPTQPAIAEPLVLPQANAAPHQDSHLLPVIEQQHHVKHQEET

Annotated regions:
phrase: IREIKEGDTLISISLQYFCTVADIKRANNLLTEQDFFALRSLRI
type: DOMAIN
name: LysM_dom
description: LysM domain

phrase: IKEGDTLISISLQYFCTVADIKRANNLLTEQDFFALRSLR
type: DOMAIN
name: LysM_dom
description: LysM domain

phrase: IKEGDTLISISLQYFCTVADIKRANN
type: DOMAIN
name: LysM_dom
description: LysM domain

phrase: LIREIKEGDTLISISLQYFCTVADIKRANNLLTEQDFFALRSLR
type: DOMAIN
name: LysM_dom
description: LysM domain
Protein sequence:
MQALIQISDKQYLVKTGDKLFIPHQNAEVGNVIDLKPLAQIDQEKTSIEPSGNVQLKVLEHLKDEKVIVFKKKRRKRYQKRNGHRQLMTQVEVLSM

Annotated regions:
phrase: VIVFKKKRRKRYQKRNGHRQLM
type: CONSERVED_SITE
name: Ribosomal_bL21_CS
description: Large ribosomal subunit protein bL21, conserved site
Protein sequence:
MPVLSTPRPSRVTTLKRTAVVLALTAYGVHKIYPLVRQCLTPARGPQVPAGEPTQEASGATATKAGMNRVFLQRLLALLRLLFPRVLCRETGLLALHSAALVSRTFLSVYVARLDGRLARCIVRKDPRAFSWQLLQWLLIALPATFINSAIRYLEGQLALSFRSRLVAHAYGLYFSQQTYYRVSNMDGRLRNPDQSLTEDVVAFAASVAHLYSNLTKPLLDVAVTSYTLLRAARSRGAGTAWPSAIAGLVVFLTANVLRAFSPKFGELVAEEARRKGELRYMHSRVVANSEEIAFYGGHEVELALLQHSYQDLASQINLILLERLWYVMLEQFLMKYVWSASGLLMVAVPIITATGYAESDSEAMKKAALEMKEEELVSERTEAFTIARNLLTAAADATERIMSSYKEVTELAGYTARVYEMFQVFEDVKHCRFKRTGDLEEAQAGPGVMVQSGVHVEGPLKIQGQVVDVEQGIICENIPIITPTGEVVVASLNIRVEEGMHLLITGPNGCGKSSLFRILGGLWPTYSGVLYKPPPQRMFYIPQRPYMSVGSLRDQVIYPDSAEDMRRKGCSEQQLEAILGIVHLRHILQREGGWEAVCDWKDVLSGGEKQRIGMARMFYHRPKYALLDECTSAVSIDVEGKIFQAAKDAGIALLSITHRPSLWKYHTHLLQFDGEGGWKFEKLDSAARLSLTEEKQRLEQQLAGIPKMQGRLQELRQILGEAAAPVQPLVPGVPT

Annotated regions:
phrase: AALVSRTFLSVYVARLDGRLARCIVRKDPRAFSWQLLQWLLIALPATFINSAIRYLEGQLALSFRSRLVAHAYGLYFSQQTYYRVSNMDGRLRNPDQSLTEDVVAFAASVAHLYSNLTKPLLDVAVTSYTLLRAARSRGAGTAWPSAIAGLVVFLTANVLRAFSPKFGELVAEEARRKGELRYMHSRVVANSEEIAFYGGHEVELALLQHSYQDLASQINLILLERLWYVMLEQFL
type: DOMAIN
name: ABC1_TM_dom
description: ABC transporter type 1, transmembrane domain

phrase: LSGGEKQRIGMARM
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: SLNIRVEEGMHLLITGPNGCGKSSLFRILGGLWPTYSGVLYKPPPQRMFYIPQRPYMSVGSLRDQVIYPDSAEDMRRKGCSEQQLEAILGIVHLRHILQREGGWEAVCDWKDVLSGGEKQRIGMARMFYHRPKYALLDECT
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: EGMHLLITGPNGCGKSSLFRILGGLWPTYSGVLYKPPPQRMFYIPQRPYMSVGSLRDQVIYPDSAEDMRRKGCSEQQLEAILGIVHLRHILQREGGWEAVCDWKDVLSGGEKQRIGMARMFYHRPKYALLDECTSAVSIDVEGKIFQAAKDAGIALLSITHRPSLWKYHTHLLQFDGEGGWKFEKLDSAARLSLTEEKQRLEQQ
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LLRLLFPRVLCRETGLLALHSAALVSRTFLSVYVARLDGRLARCIVRKDPRAFSWQLLQWLLIALPATFINSAIRYLEGQLALSFRSRLVAHAYGLYFSQQTYYRVSNMDGRLRNPDQSLTEDVVAFAASVAHLYSNLTKPLLDVAVTSYTLLRAARSRGAGTAWPSAIAGLVVFLTANVLRAFSPKFGELVAEEARRKGELRYMHSRVVANSEEIAFYGGHEVELALLQHSYQDLASQINLILLERLWYVMLEQFLMKYVWSASGLLMVAVPI
type: DOMAIN
name: ABC1_TM_dom
description: ABC transporter type 1, transmembrane domain

phrase: IICENIPIITPTGEVVVASLNIRVEEGMHLLITGPNGCGKSSLFRILGGLWPTYSGVLYKPPPQRMFYIPQRPYMSVGSLRDQVIYPDSAEDMRRKGCSEQQLEAILGIVHLRHILQREGGWEAVCDWKDVLSGGEKQRIGMARMFYHRPKYALLDECTSAVSIDVEGKIFQAAKDAGIALLSITHRPSLWKYHTHLLQFDGEGGWKFEKLDSAARLSLTEEKQRLEQQLAGIPKMQGRLQELRQILGEAAAPVQ
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain
Protein sequence:
MITIALPKGALLEDSISIFKKAGLNFSDALLENNRSLTIESECKRAKALLVRNGDVPVYVSYGQADLGIVGYDVLQESELKVAKLLDLEFGGCHMSLAVKNTSNYSKPTDLPANCKVASKFTKTARAYFDDLNIPVEIVHLTGSVELGPITGMAEAIVDLVATGKTLKENGLSKIDDLFYSTARLIANPLSIRLDSNPLRDVILSIESFKGT

Annotated regions:
phrase: ITIALPKGALLEDSISIFKKAGLNFSDALLENNRSLTIESECKRAKALLVRNGDVPVYVSYGQADLGIVGYDVLQESELKVAKLLDLEFGGCHMSLAVKNTSNYSKPTDLPANCKVASKFTKTARAYFDDLNIPVEIVHLTGSVELGPITGMAEAIVDLVATGKTLKENGLSKIDDLFYSTARLI
type: DOMAIN
name: ATP_PRibTrfase_cat
description: ATP phosphoribosyltransferase, catalytic domain

phrase: RNGDVPVYVSYGQADLGIVGYDVLQESELKVAKLLDLEFGGCHMSLAVKNTSNYSKPTDLPANCKVASKFTKTARAYFDDLNIPVEIVHLTGSVELGPITGMAEAIVDLVATGKTLKENGLSKIDDLFYSTARLIANPLSIRLDSNPLRDVILSI
type: DOMAIN
name: ATP_PRibTrfase_cat
description: ATP phosphoribosyltransferase, catalytic domain

phrase: ELGPITGMAEAIVDLVATGKT
type: CONSERVED_SITE
name: ATP_PRibTrfase_CS
description: ATP phosphoribosyltransferase, conserved site
Protein sequence:
MSALPLIHDLSLDDLKTEMVSWGERDYRVVQIWQGLYHQLVETPHELTTLPTAMRQRLSETYHFTPCEPTQWQRSNDGNTEKVLLTLRDGQFIETVLMHYERRRTVCISTQIGCAMGCRFCATGQMGFRRNLTPGEIVGQVLLFTRRLNREKHRLDNIVVMGMGEPFHNYDALAQALRILNHPQGFRFGARRITVSTVGLVPGIERFGQDFPQLNLAVSLHAATNELRDQLVPINQRYPLERLLSACRAYVERTSRRITFEWALIEGINDGIEQAEALAALVRGLNCHINLIPLNPTAAYGQLASSPERSHDFSEALSNHRISHSVRVRRGIDIQAGCGQLAIRKQKQPQRRHETDTG

Annotated regions:
phrase: IHDLSLDDLKTEMVSWGERDYRVVQIWQGLYHQLVETPHELTTLPTAMRQRLSETYHFTPCEPTQWQRSNDGNTEKVLLTLRDGQFIETVLMHYERRRTVCISTQIGCAMGCRFCATGQMGFRRNLTPGEIVGQVLLFTRRLNREKHRLDNIVVMGMGEPFHNYDALAQALRILNHPQGFRFGARRITVSTVGLVPGIERFGQDFPQLNLAVSLHAATNELRDQLVPINQRYPLERLLSACRAYVERTSRRITFEWALIEGINDGIEQAEALAALVRGLNCHINLIPLNPTAAYGQLASSPERSHDFSEALSNHRISHSVRVRRGIDIQAGCGQLAIRKQKQPQRR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: HDLSLDDLKTEMVSWGERDYRVVQIWQGLYHQLVETPHELTTLPTAMRQRLSE
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: STQIGCAMGCRFCATGQMGFRRNLTPGEIVGQVLLFTRRLNREKHRLDNIVVMGMGEPFHNYDALAQALRILNHPQGFRFGARRITVSTVGLVPGIERFGQDFPQLNLAVSLHAATNELRDQLVPINQRYPLERLLSACRAYVERTSRRITFEWALIEGIND
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: YERRRTVCISTQIGCAMGCRFCATGQMGFRRNLTPGEIVGQVLLFTRRLNREKHRLDNIVVMGMGEPFHNYDALAQALRILNHPQGFRFGARRITVSTVGLVPGIERFGQDFPQLNLAVSLHAATNELRDQLVPINQRYPLERLLSACRAYVERTSRRITFEWALIEGINDGIEQAEALAALVRGLNCHINLIPLNPTAAYGQLASSPERSHDFSEALSNHRISHSVRVRRGI
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MPLFSKRKNNTDSKDKQNTDERNQEQQQEKERPVLISPSLAKNIAETKKEVGSSSDVIIREIKIGEQDHVHLAVIYISGLVDNNTIHESLIDPLVQDESIQNTHAIQQILEKTLPLGGVKAEKSWDKLFSELMLGNALIFADGHDEALICSTQGGEQRSIQEPSTQVSFRGPRQGFTESLQTNISMIRRYIKNPNLWVEKMKKGSVTNTDIALMYIQGICDEKVLKEVKQRLEKIDIDSILESGYIEQLIEDETFTTFPTMYHTERPDVVAGNLLEGRFAIIVDGTPFVLIAPALFVQFFQSVEDYYSRFDIATSIRILRVLVFFISLVAPAVYVAATTFHQEMIPTQLLVVIAAQREIVPFPAVVEALTMEVAFEILREAGVRLPRVVGSAVSIVGALVIGQAAVQAGIVSPAMVIIVALTAIASFATPAFAMAISARLIRFIFIIASAVMGFYGLILGIIMMFVHLCSLRSFGVPYMSPLAPFSSQGVKDALFRVPWWADEKRPESVSKEDKVRQGKDQRPEPAASRGMVNKDLEEGDQNGT

Annotated regions:
Protein sequence:
MTFETAEGLADQVLKFLSDKLETNYRVAVIVVGPPGSGKSTISEKLCHEINSRYNKYLKESGSRPHLQENLNERIDLCEGIPKFEEKSLHDVQNGFFNHVQDQDFQPKKFVDKNDGSEVVVGIGGLPNSIRVENVAPLEPSNHDYKIAKIVPMDGFHLSRRHLDHFDDPVEAHRRRGSPPTFDSNNCLQLCKLLAKTCTIKPTLPVNKTTADTGTLFDKISDTFSESVPSIYVPGFDHALKDPSTGQHCVDAFTRIIVLEGLYLLLDEDNWRDIYPTFKDTHAVIVWKLDLGVDVLEQRVAKRHLQSGLAATLEAGVERFRMNDLINALRIKEHCLAADDIVSISNK

Annotated regions:
Protein sequence:
MPEFSLLAGHFGTLKKTIQGMPSDATLHSIMLKISQQFSSGIFYINMWPFSGTWMVVSTPSAASQIQKLNLTKPVILRRPLETVTGGPSMMSMHGETWKKWRALFNPGFNPGYIIGLAPNITDEVATFWLSCAKGQQGEVFPLESLTTRLTVDSICSVVLDTQLHHQIKDHPLATALQRQIDWTTFGTTFNPLKRYLTIRPLVLWYNNKVMDRIIGGEVDRACRTPPDHPSKSVISLALREYLQEQASTNSTRSLAEFKRLVAPQLRVFLFAGRNTTSSTLIYSYYLLAQHPEVLAKIRAEHEDVLGADPAEAQGRIKEDVQLLNKLPYTTAVIKETLRLFPPSASMREGRPDAEIIGEDGQRYPTVGCNVWTLTVALHHNSDYWDQVENFIPERWLVGPEDPLYPVKGAWRAFEFGPRSCIGQTLAMLELRIALAMTIRQFDITPAYDEWDSIHPATTAKEVNGHRAYQAERGAGGAHTADGFPCRVKERC

Annotated regions:
Protein sequence:
MDATPNAVELTVDNAWFIAETIGAGTFPWVLAITMPYSDAAQRGAFVDRQRDELTRMGLLSPQGVINPAVADWIKVVCFPDRWLDLRYVGPASADGACELLRGIVALRTGTGKTSNKTGNGVVALRNAQLVTFTAMDIDDPRALVPILGVGLAHRPPARFDEFSLPTRVGARADERLRSGVPLGEVVDYLGIPASARPVVESVFSGPRSYVEIVAGCNRDGRHTTTEVGLSIVDTSAGRVLVSPSRAFDGEWVSTFSPGTPFAIAVAIQTLTACLPDGQWFPGQRVSRDFSTQSS

Annotated regions:
Protein sequence:
MSISTFNRCWSKVILETLVRHNVKHVCIAPGSRSTPLTLEAVRLQERGEVRCHTHFDERGLGFLALGMAKSTNSPVAVIVTSGTAAANLYPAIIEARQSGEKLIVLTADRPAELLECGANQAILQENMFASYPVATVNLPKPGQNYAAKWLISTLDQACHSQLVEKGVVHINVPFAEPLYEANVTEIDEHVWLGPVRRWLGQHKKWTEYQEPQLEVLMHEHWDDWRTKRGVIVAGKLPQGHGMGLKLWAETMGWVLLTDVQSGVEPTLPYADIWLANKTVREKLLQADLVVQLGAHFVSKRINQFLSDFKGEFWVVDESPKRLDPYHHIQTRFNAKAHLWLRAHPPLRQKPWLLEAMALSNFCSSFIEQQVGGSLNEASLAHHIERAFPKNAALFLGNSLFVRLVDALTKRTENYPIYTNRGASGIDGLIATAVGVGIGANQAVAAVVGDMSALYDLNSLALLKKVTQPFVLFVINNNGGAIFDMLPVEAEAKNAYYRLPHNLGFAEAASVFDLKYARPYTWADLGSVLKQAYMRKEATVIEIKAGPNDATNLYKRLLEQISFAVIGA

Annotated regions:
phrase: VWLGPVRRWLGQHKKWTEYQEPQLEVLMHEHWDDWRTKRGVIVAGKLPQGHGMGLKLWAETMGWVLLTDVQSGVEPTLPYADIWLANKTVREKLLQADLVVQLGAHFVSKRINQFLSDFKGEFWVVDESPKRLDPYHHIQTRFNAKAHLWLRAHPPLRQKPWLLEAMALSNFCSSFIEQQVGGSLNEASLAHHIERAFPKNAALF
type: DOMAIN
name: MenD_middle
description: Menaquinone biosynthesis protein MenD, middle domain

phrase: KVILETLVRHNVKHVCIAPGSRSTPLTLEAVRLQERGEVRCHTHFDERGLGFLALGMAKSTNSPVAVIVTSGTAAANLYPAIIEARQSGEKLIVLTADRPAELLECGAN
type: DOMAIN
name: Thiamin_PyroP_enz_TPP-bd_dom
description: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain

phrase: IDGLIATAVGVGIGANQAVAAVVGDMSALYDLNSLALLKKVTQPFVLFVINNNGGAIFDMLPVEAEAKNAYYRLPHNLGFAEAASVFDLKYARPYTWADLGSVLKQAYMRKEATVIE
type: DOMAIN
name: TPP_enzyme_TPP-bd
description: Thiamine pyrophosphate enzyme, TPP-binding
Protein sequence:
MRKLDTRTIVVASHNKGKIAEIADLIGPFGFSAKSAAELNFSEPEETGTTFEENAAIKALASAKASGLPALSDDSGLVIDALDGAPGVYTANWAETADGTRDFAMAMQKVEDALAERGASKPEDRTARFVSVLCLAWPDGHVEYFRGEVEGTVVWPPRGTSGFGYDPIFKPDGYDTTFGEMSADEKHGWKHGDAFALSHRARAFKKFVETCLEA

Annotated regions:
Protein sequence:
MLKLKGELRTAKGLKNEAGERDRDVSNLNSKLLSLQLDIKNLHDVCKRQGKTLQENQLCVEEAMLKANHNKKQAQTLVFTDNQMDFRVNKQYHLRQLQQLKKKLLTLQQELEFRTQELQASYCSLLQYQSILEKQTSDLLVLHRHCKLKEDEVILYEEEMGNHSKSTGEKLHLAQEQLALAGDKILSLERSLNLYRDKYQTSLSNIELLECQVKMLEGELSGLIGQDPENKGDHPKVRIYTSPCVIQEHQETLKRLSEVWQKVSEQDDLIQELRNKLACSNSLVLEREEALIKLQAEFASYTATHRHPPTSSEDCEDITKILKHLQEQKDSQCLHVEEYQNLVKDLRMELEAVSEQKKKIMKDMMKLELDLHGLREETSCVIEKKDKETVFLQYRLQDLQQQYTESQKLSLKKDKLLQDKDERLHELEKNLMQVQNSLREKEAELEKLQCTTKELDTSLQEARQSTSKIDCEALRAEIQKLKDSLEEAREQLKVSDQNLTQSKEEAHLSASSLEDAHRKIENCLLQDKQKEEVIKDLQSQLHKLQKESSKIEEERKHNRQRLQELSSELSEGQRRLSNAEKEKSLLQKTLDEDEKKIDELFHSTQVSEQKQRELTNSIRKLEEELLEIKGLLEEKREQLKKSKEQEKALEEEIEALRQEAKRKEKMAKEHLRKLDEEKENLQAELTSRSSHLDSSLNKYNSSQKVIQELNAEIARQKDSIMILQTQLDSAIQKEKNCFQNMVSKEAYEELVRKSGNCQDDLTQALEKLTQATSETKSLNRSLQQTQERKAQLEDEIAAYEERMKKLNMELKKLQGFQQQSEQEVHNFDKKLEEMSNQVLQWQRQHQSDLKMLAAKESQLREFQEEMATLRESLLADEKEPYSPPAKLTPKETCRHHRENDQIMNNVEQWAKEQKIANEKLGNKLREQVKYIAKLTGEKDHLHNVMVHLQQENKKLKNEIEEKKLKAGNPRICVKAFPPNKLEPSQKGKLCCALGWRGIPQDLTPKTDHKYMGLPHSSGSSYC

Annotated regions:
Protein sequence:
MSVLVITGTGTEVGKTVVTAAIAALAPGRVAVLKAAQTGVAAGEDGDVAEVARLAGPVTAVELARYPEPLAPATAARRAGAPPVRPAQVAEAARELDREHDLVLVEGAGGLLVRYDDGGTLADVAVALSAPVLVVAHGGLGTLNAAALTAEALRARGVECAGVVVGSWPSAPDLACRCNLDDLPEVTGAPLLGVLPEGAAADPAAFGDIARAGLAPALGGRWSR

Annotated regions: