Protein sequence:
MSSSRPSHSSSNSARSRHSARIIAQTTVDAKLHADFEESGSSFDYSSSVRVTDSVGGDQPPRSDKVTTAYLHHIQKGKLIQPFGCLLALDEKTFRVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAPSASALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEVTKPGMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSANPQKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQIVEKNILRTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPGALALGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNTFKDIETMDVDTKTIHARLSDLKIEGMQELEAVTSEMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLLTLVEDSSVDIVKRMLFLALQGKEEQNIQFEIKTHGSKSECGPICLVVNACASRDLHENVVGVCFVGQDITGQKMVMDKFTRIEGDYKAIVQNRNPLIPPIFGTDEFGWCSEWNPAMTNLTGWKREEVLDKMLLGEVFGLNMACCRLKNQEAFVNLGVVLNTAMTGQESEKVSFGFFARTGKYVECLLCVSKKLDREGAVTGVFCFLQLASQELQQALHVQRLSEQTALKRLKALAYLKKQIWNPLSGIIFSGKMMEGTELGAEQKELLHTSAQCQCQLSKILDDSDLDSIIEGYLDLEMVEFTLREYYGCYQSSHDEKHEKGIPIINDALKMAETLYGDSIRLQQVLADFCRCQLILTPSGGLLTVSASFFQRPVGAILFILVHSGKLRIRHLGAGIPEALVDQMYGEDTGASVEGISLVISRKLVKLMNGDVRYMREAGKSSFIISVELAGGHKSQKRA

Annotated regions:
phrase: MERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEVTKPGMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSANPQKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNK
type: DOMAIN
name: GAF
description: GAF domain

phrase: EMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLLTLVEDSSVDIVKRMLFLALQGKEEQNIQFEIKTHGSKSECGPICLVVNACASRDLHENVVGVCFVGQD
type: DOMAIN
name: PAS_fold
description: PAS fold

phrase: DYKAIVQNRNPLIPPIFGTDEFGWCSEWNPAMTNLTGWKREEVLDKMLLGEVFGLNMACCRLKNQEAFVNLGVVLNTAMTGQESEKVSFGFFARTGKYVECLLCVSKKLDREGAVTGVFCFL
type: DOMAIN
name: PAS_fold
description: PAS fold

phrase: SMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEVTKPGMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSANPQKRKRLWGLVVCHNTSPRFVPFPLRYACEFLA
type: DOMAIN
name: Phyto_chromo_attachment
description: Phytochrome chromophore attachment domain

phrase: LIPPIFGTDEFGWCSEWNPAMTNLTGWKREEVLDKMLLGEVFGLNMACCRLKNQEAFVNLGVVLNTAMTGQESEKVSFGFFARTGKYVECLLCVSKKLDREGAVTGVFCFL
type: DOMAIN
name: PAS
description: PAS domain

phrase: LIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLLTLVEDSSVDIVKRMLFLALQGKEEQNIQFEIKTHGSKSECGPICLVVNACASRDLHENVVGVCFVGQDITGQKM
type: DOMAIN
name: PAS
description: PAS domain

phrase: RAPHSCHLQ
type: BINDING_SITE
name: Phyto_chromo_BS
description: Phytochrome chromophore binding site

phrase: SEMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLLTLVEDSSVDIVKRMLFLAL
type: DOMAIN
name: PAS
description: PAS domain

phrase: GDYKAIVQNRNPLIPPIFGTDEFGWCSEWNPAMTNLTGWKREEVLDKMLLGEVFGLNMACCRLKNQEAF
type: DOMAIN
name: PAS
description: PAS domain

phrase: YLKKQIWNPLSGIIFSGKMMEGTELGAEQKELLHTSAQCQCQLSKILDDSDLDSIIEGYLDLEMVEFTLREYYGCYQSSHDEKHEKGIPIINDALKMAETLYGDSIRLQQVLADFCRCQLILTPSGGLLTVSASFFQRPVGAILFILVHSGKLRIRHLGAGIPEALVDQMYGEDTGASVEGISLVISRKLVKLMNGDVRYMREAGKSSFIISVELA
type: DOMAIN
name: His_kinase_dom
description: Histidine kinase domain

phrase: AYLHHIQKGKLIQPFGCLLALDEKTFRVVAYSENAPELLTMVSHAVPSVGEHPVLGIGTDIRTIFTAPSASALQKAMGFGDVSLLNPILVHCKTSGKPFYAIVHRVTGSLIIDFEP
type: DOMAIN
name: PAS_2
description: PAS fold-2

phrase: RTQTLLCDMLMRDAPLGIVTQSPNIMDLVKCDGAVLFYRNKIWRLGITPSDLQLQDIAFWLSEYHMDSTGLSTDSLYDAGYPGALALGDVVCGMAAVRITSKDMLFWFRSQTAAEIRWGGAKHEPGEKDDGRRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNTF
type: DOMAIN
name: Phytochrome_cen-reg
description: Phytochrome, central region

phrase: GDSIRLQQVLADFCRCQLILTPSGGLLTVSASFFQRPVGAILFILVHSGKLRIRHLGAGIPEALVDQMYGEDTGASVEGISLVISRKLVKLMNGDVRYMREAGKSSFIISV
type: DOMAIN
name: HATPase_dom
description: Histidine kinase/HSP90-like ATPase domain

phrase: GDSIRLQQVLADFCRCQLILTPSGGLLTVSASFFQRPVGAILFILVHSGKLRIRHLGAGIPEALVDQMYGEDTGASVEGISLVISRKLVKLMNGDVRYMREAGKSSFIISVELA
type: DOMAIN
name: HATPase_dom
description: Histidine kinase/HSP90-like ATPase domain

phrase: ATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLLTLVEDSSVDIVKRMLFLALQGKEEQNIQFEIKTHGSKSECGPICLVVNACASRDLHENVVGVCFVGQD
type: DOMAIN
name: PAS
description: PAS domain

phrase: SMERLCDTMVQEVFELTGYDRAMAYKFHDDDHGEVVSEVTKPGMEPYLGLHYPATDIPQASRFLFMKNKVRMIVDCHAKHVKVLQDEKLPFDLTLCGSTLRAPHSCHLQYMENMNSIASLVMAVVVNDGDEDGDTPDSANPQKRKRLWGLVVCHNTSPRFVPFPLRYACEFLAQVFAIHVNKELELENQIVEK
type: DOMAIN
name: GAF
description: GAF domain

phrase: DYKAIVQNRNPLIPPIFGTDEFGWCSEWNPAMTNLTGWKREEVLDKMLLGEV
type: DOMAIN
name: PAS
description: PAS domain

phrase: VTSEMVRLIETATVPILAVDVDGLVNGWNTKISELTGLLVDKAIGKHLLTLVEDSSVDIVKRMLFLALQG
type: DOMAIN
name: PAS
description: PAS domain