Protein sequence:
MGARASVLTGGKLDQWEKIYLRPGGKKKYMMKHLVWASRELERFACNPGLMDTAEGCAQLLRQLEPALKTGSEGLRSLFNTLAVLYCVHNNIKVQNTQEALEKLREKMKAEQKEPEPEQAAGAAAAPESSISRNYPLVQNAQGQMVHQPLSPRTLNAWVKVVEEKAFNPEVIPMFMALSEGATPQDLNTMLNTVGGHQAAMQMLKEVINEEAAEWDRGHPVHMGPIPPGQVREPRGSDIAGTTSTLAEQVAWMTANPPVPVGDIYRRWIVLGLNKIVRMYSPASILDIKQGPKETFRDYVDRFYKTLRAEQATQEVKNWMTETLLVQNANPDCKNILRALGPGASLEEMMTACQGVGGPAHKARVLAEAMTQAQTATSVFMQRGNFKGIRKTIKCFNCGKEGHLARNCKAPRKKGCWKCGQEGHQMKDCRSGERQFFREGLASLQREARKFPPDNNKERANSPSNRELWVSGGEDHTGDREGRKGEDRELSVPTLNFPQITLWQRPILTVKIGGEIKEALLDTGADDTVIEEIQLEGKWKPKMIGGIGGFIKVKQYDNVIIEIQGKKAVGTVLVGPTPVNIIGRNFLTQIGCTLNFPISPIETIPVKLKPGMDGPRVKQWPLTEEKIKALTEICTEMEKEGKISRIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSCPLDENFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQSTMTKILEPFRKNNPELVIYQYMDDLYVGSDLEITQHREAVERLRSHLLTWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQTIQLPEKDTWTVNDIQQLVGKLNWASQIYPGIKVKQLCKLIRGAKALTEVVTLTREAELELAENREILKEPVHGAYYNPDKELIAEIQKQGQGQWTYQIYQDLHKNLKTGKYAKMRSTHTNDIRQLTEVVQKVALESIVIWGKTPKFRLPVQKEVWETWWTEYWQATWIPDWEFVNTPPLVKLWYQLETEPISGAETYYVDGAANRETKLGKAGFVTDRGRQKVTSISETTNQQAELQAVLMALQDAGQEVNIVTDSQYVLGIIHSQPDKSESELVNQIIEELIKKERIYLSWVPAHKGIGGNEQIDKLVSTGIRKVLFLDGIDKAQEEHERYHSNWKAMASDFNLPPIVAKEIVASCDKCQLKGEAIHGQINCSPGVWQLDCTHLEGKIILVAVHVASGYLEAEVIPAETGQETAYFILKLAGRWPVKVIHTDNGSNFTSATVKAACWWANIQQEFGIPYNPQSQGAVESMNKELKKIIGQIRDQAEHLKTAVQMAVFIHNFKRKGGIGGYTAGERIIDIIATDIQTTKLQTQILKVQNFRVYYRDSREPTWKGPAKLLWKGEGAVVIQDNGDIKVVPRRKAKIIRDYGKQMAGDGCVASGQDESQDME

Annotated regions:
phrase: CWKCGQEGHQMKDCR
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: VYYRDSREPTWKGPAKLLWKGEGAVVIQDNGDIKVVPRRKAKI
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: WQRPILTVKIGGEIKEALLDTGADDTVIEEIQLEGKWKPKMIGGIGGFIKVKQYDNVIIEIQGKKAVGTVLVGPTPVNIIGRNFLTQIGCT
type: DOMAIN
name: Retropepsins
description: Retropepsins

phrase: LTVKIGGEIKEALLDTGADDTVIEEIQLEGKWKPKMIGGIGGFIKVKQYDNVIIEIQGKKAVGTVLVGPTPVNIIGRNFL
type: DOMAIN
name: Retropepsin-like_cat_dom
description: Retropepsin-like catalytic domain

phrase: FRVYYRDSREPTWKGPAKLLWKGEGAVVIQDNGDIKVVPRRKAKIIR
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: KEALLDTGADDTVIEEIQLEGKWKPKMIGGIGGFIKVKQYDNVIIEIQGKKAVGTVLVGPTPVNIIGRN
type: DOMAIN
name: Peptidase_A2_cat
description: Peptidase A2A, retrovirus, catalytic

phrase: KCFNCGKEGHLARNCK
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: GCWKCGQEGHQMKDCR
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: EGKISRIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSCPLDENFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQSTMTKILEPFRKNNPELVIYQYMDDLYVGSDLEITQHREAVERLRSHLLTWGFTTPDKKHQKEPPFLWMGYE
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: YYNPDKELIAEIQKQGQGQWTYQIYQDLHKNLKTGKYAKMRSTHTNDIRQLTEVVQKVALESIVIWGKTPKFRLPVQKEVWETWWTEYWQATWIPDWEFVN
type: DOMAIN
name: RVT_connect
description: Reverse transcriptase connection

phrase: KCFNCGKEGHLARNC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: ISGAETYYVDGAANRETKLGKAGFVTDRGRQKVTSISETTNQQAELQAVLMALQDAGQEVNIVTDSQYVLGIIHSQPDKSESELVNQIIEELIKKERIYLSWVPAHKGIGGNEQIDKLVSTGI
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: IKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSCPLDENFRKYTAFTIPSVNNETPGIRYQYNVLPQGWKGSPAIFQSTMTKILEPFRKNNPELVIYQYMDDLYVGSDLEITQHREAVERLRSHLLTWGFTTPDKKHQKEPPFLWMGYE
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: INCSPGVWQLDCTHLEGKIILVAVHVASGYLEAEVIPAETGQETAYFILKLAGRWPVKVIHTDNGSNFTSATVKAACWWANIQQEFGIPYNPQSQGAVESMNKELKKIIGQIRDQAEHLKTAVQMAVFIHNFKRKGGIGGYTAGERIIDI
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: RASVLTGGKLDQWEKI
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: RPGGKKKYMMKHLVWASR
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: ERFACNPGLMDTAEG
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: TGSEGLRSLFNTLAVLYCV
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: HNNIKVQNTQEAL
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: IKCFNCGKEGHLARNC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: GCWKCGQEGHQMKDC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: CSPGVWQLDCTHLEGKIILVAVHVASGYLEAEVIPAETGQETAYFILKLAGRWPVKVIHTDNGSNFTSATVKAACWWANIQQEFGIPYN
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: ETYYVDGAANRETKLGKAGFVTDRGRQKVTSISETTNQQAELQAVLMALQDAGQEVNIVTDSQYVLGIIHSQPDKSESELVNQIIEELIKKERIYLSWVPAHKGIGGNEQIDKLVSTG
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: AQEEHERYHSNWKAMASDFNLPPIVAKEIVASCDKC
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: QTIQLPEKDTWTVNDIQQLVGKLNWASQIYPGIKVKQLCKLIRGAKALTEVVTLTREAELE
type: DOMAIN
name: RVT_thumb
description: Reverse transcriptase thumb

phrase: ALLDTGADDTV
type: ACTIVE_SITE
name: Aspartic_peptidase_AS
description: Aspartic peptidase, active site

phrase: MYSPASILDIKQGPKETFRDYVDRFYKTLRAEQATQEVKNWMTETLLVQNANPDCKNILRALGPGASLEEMMT
type: DOMAIN
name: Gag_p24_C
description: Retroviral nucleocapsid Gag protein p24, C-terminal domain

phrase: GARASVLTGGKLDQWEKIYLRPGGKKKYMMKHLVWASRELERFACNPGLMDTAEGCAQLLRQLEPALKTGSEGLRSLFNTLAVLYCVHNNIKVQNTQEALEKLREKMKAEQKEPEPEQAAGAAAAPESSISRN
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: DGIDKAQEEHERYHSNWKAMASDFNLPPIVAKEIVASCDKC
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain