nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MALSHRLELRQGQGLVITPQLQQAIKLLQLSNIELDAFVEAELERNPLLQRDEGDHEPAVEVEAERDASLTQVDAVADTTAGRELDTPVDDVSPGERATGEGTDAEHAGGQIDWSRAGGGGSFESDEGYERALTDSPTLAAHLRTQLVQAALSPAHNAIAEILIDAVDEGGYLRLDIVELADRLGCALALVEETLSVLQGFEPVGVFARDVRECLALQLKDLNRYDPAMAAMLDHLELLAKRDMAGLRRICGVDDEDLREMIGEIRSLNPRPGAAYHSEPAETLVPDVMVREGLGGMWHVELNTDTLPRVLVDQRYHARVSKGARSDQEKTFVADCMASANWLVKSLDQRAKTILKVASEIVRQQDGFLAFGVEHLRPLNLKTVADAIGMHESTVSRVTSNKYIATPRGVFELKFFFTSAIQSSEGGEAHSAASVRHKIKGLVDAEKCEADVHSDDRIVEILKAAGVDIARRTVAKYREAMRIPSSVERRRLMKEAV

Annotated regions:
phrase: YERALTDSPTLAAHLRTQLVQAALSPAHNAIAEILIDAVDEGGYLRLDIVELADRLGCALALVEETLSVLQGFEPVGVFARDVRECLALQLKDLNRYDPAMAAMLDHLELLAKRDMAGLRRICGVDDEDLREMIGEIRSLNPRPGAAYHSEPAETLVPDVMVREGLGGMWHVELNTDTLPRVLVDQR
type: DOMAIN
name: RNA_pol_sigma_54_core-bd
description: RNA polymerase sigma factor 54, core-binding domain

phrase: TFVADCMASANWLVKSLDQRAKTILKVASEIVRQQDGFLAFGVEHLRPLNLKTVADAIGMHESTVSRVTSNKYIATPRGVFELKFFFTSAIQSSEGGEAHSAASVRHKIKGLVDAEKCEADVHSDDRIVEILKAAGVDIARRTVAKYREAMRIPSSVERR
type: DOMAIN
name: RNA_pol_sigma_54_DNA-bd
description: RNA polymerase sigma factor 54, DNA-binding
Protein sequence:
MKQTVYTASPESQQIHVWSLNHEGTLTLVQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGVLTFAAESALPGSPTHISTDHHGRFVFVGSYNAGNVSVTRLQDGLPVELVDVVEGLDGCHSANITPDNRTLWVPALKQDRICLFTLSDDGHLVAQEPAEVNTVEGAGPRHMVFHPNRQYAYCVNELNSSVDVWQLKNPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSVEGFQPTEVQPRGFNIDNSGKYLIAAGQKSHHIAVYEITGTQGLLTEKGRYAVGQGPMWVVVNAY

Annotated regions:
Protein sequence:
MIMLTTSVAEAAHCLKQGQVLAYPTEAVWGLGCDPFNELAFRQILALKQRPIEKGVILLAGDVGQIEYLLADLDETIRAQVIESWTTRSVDERAITWLLPVSSDQVPTWITGQHHQVAVRVTNHPLCVALCHAFNGFIVSTSANPAGLEPARSLQEASAYFGQGLNYLNGDLGLSQQPSRIIDATTGRVIRD

Annotated regions:
phrase: TTSVAEAAHCLKQGQVLAYPTEAVWGLGCDPFNELAFRQILALKQRPIEKGVILLAGDVGQIEYLLADLDETIRAQVIESWTTRSVDERAITWLLPVSSDQVPTWITGQHHQVAVRVTNHPLCVALCHAFNGFIVSTSANPAGLEPARSLQEASAYFGQGLNYLNGDLGLSQQPSRIIDATTGRVIR
type: DOMAIN
name: Sua5-like_dom
description: Threonylcarbamoyl-AMP synthase-like domain

phrase: CLKQGQVLAYPTEAVWGLGCDPFNELAFRQILALKQRPIEKGVILLAGDVGQIEYLLADLDETIRAQVIESWTTRSVDERAITWLLPVSSDQVPTWITGQHHQVAVRVTNHPLCVALCHAFNGFIVSTSANPAGLEPARSLQEASAYFGQGLNYLNGDLGLSQQPSRIIDATTGRVI
type: DOMAIN
name: Sua5-like_dom
description: Threonylcarbamoyl-AMP synthase-like domain
Protein sequence:
MSLGLAGAQEVELTLETVIQTLESSVLCQEKGLGARDLAQDAQITSLPALIREIVTRNLSQPESPVLLPATEMASLLSLQEENQLLQQELSRVEDLLAQSRAERDELAIKYNAVSERLEQALRLEPGELETQEPRGLVRQSVELRRQLQEEQASYRRKLQAYQEGQQRQAQLVQRLQGKILQYKKRCSELEQQLLERSGELEQQRLRDTEHSQDLESALIRLEEEQQRSASLAQVNAMLREQLDQAGSANQALSEDIRKVTNDWTRCRKELEHREAAWRREEESFNAYFSNEHSRLLLLWRQVVGFRRLVSEVKMFTERDLLQLGGELARTSRAVQEAGLGLSTGLRLAESRAEAALEKQALLQAQLEEQLRDKVLREKDLAQQQMQSDLDKADLSARVTELGLAVKRLEKQNLEKDQVNKDLTEKLEALESLRLQEQAALETEDGEGLQQTLRDLAQAVLSDSESGVQLSGSERTADASNGSLRGLSGQRTPSPPRRSSPGRGRSPRRGPSPACSDSSTLALIHSALHKRQLQVQDMRGRYEASQDLLGTLRKQLSDSESERRALEEQLQRLRDKTDGAMQAHEDAQREVQRLRSANELLSREKSNLAHSLQVAQQQAEELRQEREKLQAAQEELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVEVREALSRATLQRDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNESLAQDKLDLNRLVAQLEEEKSALQGRQRQAEQEATVAREEQERLEELRLEQEVARQGLEGSLRVAEQAQEALEQQLPTLRHERSQLQEQLAQLSRQLSGREQELEQARREAQRQVEALERAAREKEALAKEHAGLAVQLVAAEREGRTLSEEATRLRLEKEALEGSLFEVQRQLAQLEARREQLEAEGQALLLAKETLTGELAGLRQQIIATQEKASLDKELMAQKLVQAEREAQASLREQRAAHEEDLQRLQREKEAAWRELEAERAQLQSQLQREQEELLARLEAEKEELSEEIAALQQERDEGLLLAESEKQQALSLKESEKTALSEKLMGTRHSLATISLEMERQKRDAQSRQEQDRSTVNALTSELRDLRAQREEAAAAHAQEVRRLQEQARDLGKQRDSCLREAEELRTQLRLLEDARDGLRRELLEAQRKLRESQEGREVQRQEAGELRRSLGEGAKEREALRRSNEELRSAVKKAESERISLKLANEDKEQKLALLEEARTAVGKEAGELRTGLQEVERSRLEARRELQELRRQMKMLDSENTRLGRELAELQGRLALGERAEKESRRETLGLRQRLLKGEASLEVMRQELQVAQRKLQEQEGEFRTRERRLLGSLEEARGTEKQQLDHARGLELKLEAARAEAAELGLRLSAAEGRAQGLEAELARVEVQRRAAEAQLGGLRSALRRGLGLGRAPSPAPRPVPGSPARDAPAEGSGEGLNSPSTLECSPGSQPPSPGPATSPASPDLDPEAVRGALREFLQELRSAQRERDELRTQTSALNRQLAEMEAERDSATSRARQLQKAVAESEEARRSVDGRLSGVQAELALQEESVRRSERERRATLDQVATLERSLQATESELRASQEKISKMKANETKLEGDKRRLKEVLDASESRTVKLELQRRSLEGELQRSRLGLSDREAQAQALQDRVDSLQRQVADSEVKAGTLQLTVERLNGALAKVEESEGALRDKVRGLTEALAQSSASLNSTRDKNLHLQKALTACEHDRQVLQERLDAARQALSEARKQSSSLGEQVQTLRGEVADLELQRVEAEGQLQQLREVLRQRQEGEAAALNTVQKLQDERRLLQERLGSLQRALAQLEAEKREVERSALRLEKDRVALRRTLDKVEREKLRSHEDTVRLSAEKGRLDRTLTGAELELAEAQRQIQQLEAQVVVLEQSHSPAQLEVDAQQQQLELQQEVERLRSAQAQTERTLEARERAHRQRVRGLEEQVSTLKGQLQQELRRSSAPFSPPSGPPEK

Annotated regions:
phrase: RRKLQAYQEGQQRQAQLVQRLQGKILQYKKRCSELEQQLLERSGELEQQRLRDTEHSQDLESALIRLEEEQQRSASLAQVNAMLREQLDQAGSANQALSEDIRKVTNDWTRCRKELEHREAAWRREEESFNAYFSNEHSRLLLLWRQVVGFRRLVSEVKMFTERDLLQLGGELART
type: DOMAIN
name: Rootletin-like_CC
description: Rootletin-like, coiled-coil
Protein sequence:
MVKYLSQSEAIELDLDLFEMFHVGQLMELAGLSCADAVAECFPAQTHPRVLVVCGPGNNGGDGLVCARHLSLMGYQPTVYYPKPTLMSLYENLTNQCHHMEIPSVKKCPSVSDAEEDYDLILDALFGFGFKPPVREDFVPLVKMMQETKVPIASVDIPSGWDVEKGKQSECDFEPKLLISLTAPKLCAEHFKGEHHYLGGRFVPPALQRKYQLNLPDYGSKLVVRL

Annotated regions:
phrase: AIELDLDLFEMFHVGQLMELAGLSCADAVAECFPAQTHPRVLVVCGPGNNGGDGLVCARHLSLMGYQPTVYYPKPTLMSLYENLTNQCHHMEIPSVKKCPSVSDAEEDYDLILDALFGFGFKPPVREDFVPLVKMMQETKVPIASVDIPSGWDVEKGKQSECDFEPKLLISLTAPKLCAEHFKGEHHYLGGRFVPPALQRKYQLN
type: DOMAIN
name: YjeF_N_dom
description: YjeF N-terminal domain

phrase: QLMELAGLSCADAVAECFPAQTHPRVLVVCGPGNNGGDGLVCARHLSLMGYQPTVYYPKPTLMSLYENLTNQCHHMEIPSVKKCPSVSDAEEDYDLILDALFGFGFKPPVREDFVPLVKMMQETKVPIASVDIPSGWDVEKGKQSECDFEPKLLISLTAPKL
type: DOMAIN
name: YjeF_N_dom
description: YjeF N-terminal domain

phrase: FHVGQLMELAGLSCADAVAECFPAQTHPRVLVVCGPGNNGGDGLVCARHLSLMGYQPTVYYPKPTLMSLYENLTNQCHHMEIPSVKKCPSVSDAEEDYDLILDALFGFGFKPPVREDFVPLVKMMQETKVPIASVDIPSGWDVEKGKQSECDFEPKLLISLTAPKLCAEHFKGEHHYLGGRFV
type: DOMAIN
name: YjeF_N_dom
description: YjeF N-terminal domain

phrase: YLSQSEAIELDLDLFEMFHVGQLMELAGLSCADAVAECFPAQTHPRVLVVCGPGNNGGDGLVCARHLSLMGYQPTVYYPKPTLMSLYENLTNQCHHMEIPSVKKCPSVSDAEEDYDLILDALFGFGFKPPVREDFVPLVKMMQETKVPIASVDIPSGWDVEKGKQSECDFEPKLLISLTAPKLCAEHFKGEHHYLGGRFVPPALQRKYQLNL
type: DOMAIN
name: YjeF_N_dom
description: YjeF N-terminal domain
Protein sequence:
MKTHYFLLVMLFFLFSQMELGAGILTSLGRRTDQYRCLQNGGFCLRSSCPSHTKLQGTCKPDKPNCCRS

Annotated regions:
phrase: DQYRCLQNGGFCLRSSCPSHTKLQGTCKPDKPNCC
type: DOMAIN
name: Defensin_beta-like
description: Beta-defensin-like domain
Protein sequence:
MTADPGDRVRVTHGDASHEGVLVPSPSDDHLVVKLDSGYNVGVDTADADIDVLDADAVTVDGDTGEDAAGSTVEFDDDLPTIALISTGGTIASTVDYRTGAVTAQFDAEDVLRAVPDLAGRANYRGRVVANILSENMEPSIWQDLAAAVREEIEAGADGVVVMHGTDTMQFSASALSFMLETPVPVVFTGSQRSADRPSSDNVMNAVCAVEAAKSDVAEVMVCMHATESDDRCALHRGTRVRKTHTSRRDAFETVGATPLGYVDYDAASEAATADARGVTVEGAHAARGDATLDVASALEPAVELVKFTPGMNESLLAACEGSAGVVIEGTGLGHVHSDLTDTIGSLVDDGTTVVMTSQCLEGRVCDRVYDTGRDLLAAGVVEAGDTLPGTAKVKLMWALANADDPEAAMQESVAGALTTQSRPWTA

Annotated regions:
phrase: GVVVMHGTDT
type: ACTIVE_SITE
name: Asparaginase/glutaminase_AS2
description: Asparaginase/glutaminase, active site 2

phrase: IALISTGGTIASTVDYRTGAVTAQFDAEDVLRAVPDLAGRANYRGRVVANILSENMEPSIWQDLAAAVREEIEAGADGVVVMHGTDTMQFSASALSFMLETPVPVVFTGSQRSADRPSSDNVMNAVCAVEAAKSDVAEVMVCMHATESDDRCALHRGTRVRKTHTSRRDAFETVGATPLGYVD
type: DOMAIN
name: L-asparaginase_N
description: L-asparaginase, N-terminal

phrase: ADPGDRVRVTHGDASHEGVLVPSPSDDHLVVKLDSGYNVGVDTADADIDV
type: DOMAIN
name: GatD_N
description: GatD, N-terminal

phrase: LISTGGTI
type: ACTIVE_SITE
name: Asparaginase/glutaminase_AS1
description: Asparaginase/glutaminase, active site 1

phrase: VELVKFTPGMNESLLAACEGSAGVVIEGTGLGHVHSDLTDTIGSLVDDGTTVVMTSQCLEGRVCDRVYDTGRDLLAAGVVEAGDTLPGTAKVKLMWALANADDPE
type: DOMAIN
name: Asparaginase_C
description: Asparaginase/glutaminase, C-terminal
Protein sequence:
MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQFPGACGLRYRNPVSQCMRGVRLVEGILHAPDAGWGNLVYVVNYPKDNKRKMDETDASSAVKVKRAVQKTSDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNSKQSPDEPLRSRKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVAQSLCGEDLIIKGISVHISNAEPKHNSNRQLERSGRFGGNPGGFGNQGGFGNSRGGGAGLGNNQGGNMGGGMNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQNQSGPSGNNQSQGSMQREPNQAFGSGNNSYSGSNSGAPLGWGSASNAGSGSGFNGGFGSSMDSKSSGWGM

Annotated regions:
phrase: KVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVAQSLCGEDLIIKGISVHI
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: DLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDC
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: RKVFVGRCTEDMTAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVAQSLCGEDLIIKGISVHISNAE
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: YIRVTEDENDEPIEIPSEDDGTVLLSTVTAQFPGACGLRYRNPVSQCMRGVRLVEGILHAPDAGWGNLVYVV
type: DOMAIN
name: TDP-43_N
description: TAR DNA-binding protein 43, N-terminal

phrase: YIRVTEDENDEPIEIPSEDDGTVLLSTVTAQFPGACGLRYRNPVSQCMRGVRLVEGILHAPDAGWGNLVYVVN
type: DOMAIN
name: TDP-43_N
description: TAR DNA-binding protein 43, N-terminal

phrase: SDLIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMSQRHMIDGRWCDCKLPNSKQSPDEPLRSRKVFVGRCT
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: PKHNSNRQLERSGRFGGNPGGFGNQGGFGNSRGGGAGLGNNQGGNMGGGMNFGAFSINPAMMAAAQAALQSSWGMMGMLASQQNQSGPSGNNQSQGSMQREPNQAFGSG
type: DOMAIN
name: TDP-43_C
description: TAR DNA-binding protein 43, C-terminal

phrase: VFVGRCTEDMTAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVA
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: LIVLGLPWKTTEQDLKDYFSTFGEVLMVQVKKDLKTGHSKGFGFVRFTEYETQVKVMS
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain
Protein sequence:
MFRLLSSCCSCLRTTEETRRNVTIPIIGLNNSGKTVLVEAFQKLLPSKTDHCMKSELTTLLLDEYELSIYDLNGDLKGREAWPNYYAQAHGLVFVLDSSDIRRMQEVKIILTHLLSDKRVAGKPILILANKQDKKKALMPCDIIDYLLLKKLVKENKCPCRVEPCSAIRNLERRNHQPIVEGLRWLLAVIDTCQLPPTSSISISKNNTGSGERCSSHSFSTRTGMSKEKRQHLEQCSIEAKPLKSILQKEGTRLWSKKNMSVTFALDEPMKEGECSRRMRAQNTTKLCYN

Annotated regions:
Protein sequence:
MGELFRSEEMTLAQLFLQSEAAYCCVSELEELGKVQFRDLNPDVNVFQRKFVNEVRRCEEMDRKLRFVEKEIRKANIPIMDTGENPEVPFPRDMIDLEANFEKIENELKEINTNQEALKRNFLELTELKFILRKTQQFFDEMADPDLLEESSSLLEPNEMGRGAPLRLGFVAGVINRERIPTFERMLWRVCRGNVFLRQAEIENPLEDPVTGDYVHKSVFIIFFQGDQLKNRVKKICEGFRASLYPCPETPQERKEMASGVNTRIDDLQMVLNQTEDHRQRVLQAAAKNIRVWFIKVRKMKAIYHTLNLCNIDVTQKCLIAEVWCPVTDLDSIQFALRRGTEHSGSTVPSILNRMQTNQTPPTYNKTNKFTHGFQNIVDAYGIGTYREINPAPYTVITFPFLFAVMFGDFGHGILMTLFAVWMVLRESRILSQKNENEMFSMVFSGRYIILLMGLFSIYTGLIYNDCFSKSLNIFGSSWSVRPMFTIGNWTEETLLGSSVLQLNPAIPGVFGGPYPFGIDPIWNIATNKLTFLNSFKMKMSVILGIIHMLFGVSLSLFNHIYFKKPLNIYFGFIPEIIFMSSLFGYLVILIFYKWTAYDAHSSRNAPSLLIHFINMFLFSYPESGNAMLYSGQKGIQCFLIVVAMLCVPWMLLFKPLILRHQYLRKKHLGTLNFGGIRVGNGPTEEDAEIIQHDQLSTHSEDAEEPTEDEVFDFGDTMVHQAIHTIEYCLGCISNTASYLRLWALSLAHAQLSEVLWTMVIHIGLHVRSLAGGLGLFFIFAAFATLTVAILLIMEGLSAFLHALRLHWVEFQNKFYTGTGFKFLPFSFEHIREGKFDE

Annotated regions:
Protein sequence:
MEKLEKLISTYENYPKAGVSFKDVIEIVQHPSIFRQLILEMAKSKIIKEAEALISIDARGFIFGSAISIQAAKPMIVARKPGKLPGELVTKKYSLEYGENSLSIQKKALKKYNSFAIIDDLLATGGTVNCVSELINNNNKKVVGLLVVAELSKFDGRSRFNFPVESSILF

Annotated regions:
phrase: LILEMAKSKIIKEAEALISIDARGFIFGSAISIQAAKPMIVARKPGKLPGELVTKKYSLEYGENSLSIQKKALKKYNSFAIIDDLLATGGTVNCVSELINNNNKKVVGLLVVAELSKFDG
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: EAEALISIDARGFIFGSAISIQAAKPMIVARKPGKLPGELVTKKYSLEYGENSLSIQKKALKKYNSFAIIDDLLATGGTVNCVSELINNNNKKVVGLLVV
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain
Protein sequence:
MTSLTNSLNPAQTLAPASNGDVADFFALLKPRVMALVVFTALVGMTVSPSHVNPVIGAVSLLMIAVGAGASGCLNMWWDADIDAVMTRTRSRPIPAGRIRPEEALTFGLVLAVGSVLMLGLAANWLAAGLLAFTIVFYTVIYSMWLKRATAQNIVIGGAAGALPPMIGQAVVTGSVGIEGIILFLIIFIWTPPHFWALALVKSADYAKAGIPMMPNVAGPDSTRRQIVGYTLLLAPLGLAPVALGFGGLIYGLVALLGGLAMLVLSLQVHRRREGESADKAAMSLFGFSILYLFLLFSALLAEQGLGLMRPIPVLLG

Annotated regions:
phrase: NMWWDADIDAVMTRTRSRPIPA
type: CONSERVED_SITE
name: UbiA_prenylTrfase_CS
description: UbiA prenyltransferase conserved site
Protein sequence:
MTPISQRISQKSPKLRETKQIQMTTTDKSAGIVTDSEAGPETSLLLNPHEGSTKKAPSDSYHFAYIIYFTLGVGFLLPWNAFITAVDYFSYLYPSTAVDRIFAVIYMLVALVCLFVIVVFYAHKSLASFRINLGLLLFVIALLVVPVLDLVYVKGQVGLYAGFDVTSAAVALSGLGDALMQGGLIGVAGEMPERYMQAVVAGTAGSGVLVSLLRILTKAVYPQDPDGLRKSANLYFAVGIVVMVICAVFYNVAHKLPVIKFHEERKNEELIREKSEEKGSLTGLAWRTTLWDIVTKVKSHGFGIVLLYMVTLSIFPGYITEDVHSELLTDWYPILLIAAYNVFDLVGKCLTAVFMLEDEKIAVGGSIARLLFYPLFWGCLHGPMFLRTEIPVTILTCLLGLTNGYLTSVLMILAPKSVPLRHSETAGIVTVMFLVVGLASGSVIAWFWVI

Annotated regions:
Protein sequence:
MSRIGKLPITIPEGVKVSLNDLEVRISGPKGELSKTFKGNIVVLLAENKLLVKPLAVSKNARAMWGTARSIISNMVTGVKEGFQLKLEVNGVGYRAMVKGKYLNLMLAKSHNTKIEIPPDIKIDVPKQNIIILEGIDKEKLGQFASIIIKQRPPEPYKGKGIRFENQFIPRKEGKKN

Annotated regions:
phrase: PEPYKGKG
type: CONSERVED_SITE
name: Ribosomal_uL6_CS
description: Large ribosomal subunit protein uL6, conserved site

phrase: GVGYRAMVKGKYLNLMLAKSHNTKIEIPPDIKIDVPKQNIIILEGIDKEKLGQFASIIIKQRPPEPYKGKGI
type: DOMAIN
name: Ribosomal_uL6_a/b-dom
description: Large ribosomal subunit protein uL6, alpha-beta domain

phrase: IPEGVKVSLNDLEVRISGPKGELSKTFKGNIVVLLAENKLLVKPLAVSKNARAMWGTARSIISNMVTGVKE
type: DOMAIN
name: Ribosomal_uL6_a/b-dom
description: Large ribosomal subunit protein uL6, alpha-beta domain
Protein sequence:
MSYGDSREKILSAATRLFQLQGYYGTGLNQIIKESGAPKGSLYYHFPGGKEQLAIEAVNEMKEYIRQKIADCMEACTDPAEGIQAFLKELSCQFSCTEDIEGLPVGLLAAETSLKSEPLREACHEAYKEWASVYEEKLRQTGCSESRAKEASTVVNAMIEGGILLSLTAKNSTPLLHISSCIPDLLKR

Annotated regions:
phrase: PAEGIQAFLKELSCQFSCTEDIEGLPVGLLAAETSLKSEPLREACHEAYKEWASVYEEKLRQTGCSESRAKEASTVVNAMIEGGILLSLTAKNSTPLLHI
type: DOMAIN
name: YxaF_TetR_C
description: Transcriptional regulator LmrA/YxaF-like, C-terminal domain

phrase: GDSREKILSAATRLFQLQGYYGTGLNQIIKESGAPKGSLYYHFPGGKEQLAIEAVNEMKE
type: DOMAIN
name: HTH_TetR
description: DNA-binding HTH domain, TetR-type

phrase: ILSAATRLFQLQG
type: DOMAIN
name: HTH_TetR
description: DNA-binding HTH domain, TetR-type

phrase: IIKESGAPKGSLYYHFPGGKEQL
type: DOMAIN
name: HTH_TetR
description: DNA-binding HTH domain, TetR-type

phrase: ILSAATRLFQLQGYYGTGLNQIIKESGAPKGSLYYHFPGGKEQLAI
type: DOMAIN
name: HTH_TetR
description: DNA-binding HTH domain, TetR-type
Protein sequence:
MLCASQASTTTLCSTMDQTSQPSSSSSATIRLGGRAIDRHNPIIRDGRRLTPPPSPNLNPSSSSSSTYHTPLMTRLGLESSEQKRLAKRKSKKGDSDVGKSPVSCFSSDTPQGSSRYLLSNPVFFDGFVDSDPIPIPIDEPEITKADDLNNFHEDRLIINASKYLSTSASFLEKKQPDFFEGFLDYEPVLSPDNPFSEPTKASPTASLSSLEDKDVSSPDFKFSPPPPPPPSPPQSSPPSPPEKNSSSDQVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLASISKVKNAQFWPEIIQK

Annotated regions:
phrase: LRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLASI
type: DOMAIN
name: HMA_dom
description: Heavy metal-associated domain, HMA

phrase: DQVVVLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLASISKVKNAQFWP
type: DOMAIN
name: HMA_dom
description: Heavy metal-associated domain, HMA

phrase: VLRVSLHCKGCAGKVKKHLSKLKGVTSYNIDFAAKKVTVTGDVTPLTVLASIS
type: DOMAIN
name: HMA_dom
description: Heavy metal-associated domain, HMA
Protein sequence:
MPVRPARCYKRIKGPPYTREEYIHGAPMIQIPKFDMGTTSAAARAAFPLVAKLVVQERGQIRMQALEAARQMAYKYLSKYVGDANYYLRLEAVPHHVLRENRMLAMAGADRLQEGMRLAFGSPAGRAARVEAGQVIFYAEFKPEHVAHMKEALRRASTKLPLPTRIVIEAKGDGGGKAATQG

Annotated regions:
phrase: ADRLQEGMRLAFGSPAGRAAR
type: CONSERVED_SITE
name: Ribosomal_uL16_CS_euk_arc
description: Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaea

phrase: FPLVAKLVVQERGQIRMQALEAARQMAYKYLSKYVGDANYYLRLEAVPHHVLRENRMLAMAGADRLQEGMRLAFGSPAGRAARVEAGQVIFYAEFKPEHVAHMKEALRRASTKLPLPTRI
type: DOMAIN
name: Ribosomal_uL16_dom
description: Large ribosomal subunit protein uL16 domain
Protein sequence:
MNGQWYKHLIGARTIKTGIAIFLTAVFCMALDLTPIYAILTAVVTIEPTAKASLIKGYRRLPATVIGAGFAVLFTYLFGDQSPFTYALSATFTILFCTKLKLQVGTNVAVLTSLAMIPGIHDAYIFNFLSRTLTAIIGLVTSGLINFMVFPPKYYGQVEEKLSKTDALMYKLFYNRCQEIILSRLQSDKSEKAYKNIFNLNNQVETLISYQRDELSYHKKKECDWKLLNQLTKRAYTNRLFITHLSNIIYLPKNTRVNFSGDEKMALLKISSSIKDIFYDGSFKREDDSVETLRSTIKALEISGENQIKSHILYEVLMIYRLLDSRYA

Annotated regions:
Protein sequence:
MDDSENNAPSTPGSPGFSTDRLPPNTTTSRGATDPSSYSDDDDDDVVGAEEAEVDPNVLPEDDGVVAAEEEEDGEDLFNDNYLDDYRRMDEQDQYESVGLDDSIEDERNLDEIMADRRAAEAELDARDVRTGAAPDRKLPRMLHDQDTDEDMSFRRPKRHRANFRPPREPRTPRSDDDGDGATPSSPGRSQRGMYSGGDVPMTDQTDDDPYEDEFDEEDEMNMYRVQGTLREWVTRDEVRRFIAKKFKEFLLTYVNPKNEQGEFEYVRLINEMVLANKCSLEIDYKQFIYIHPNIAIWLADAPQSVIEVMEEVAKNVVFDLHKNYRNIHQKIYVRITNLPVYDQIRNIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCSKCGTVLGPFFQNSYTEVKVGSCPECQSKGPFTINVEQTIYRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGIYTNNFDLSLNTKNGFPVFATVVEANYVAKKQDLFSAYKLTDEDKAEIEKLAKDPRIGERIVKSIAPSIYGHEDIKTAIALAMFGGQEKNVKGKHRLRGDINVLLLGDPGTAKSQFLKYVEKTGHRAVYTTGKGASAVGLTAAVHKDPVTREWTLEGGALVLADRGICLIDEFDKMNDQDRVSIHEAMEQQSISISKAGIVTSLQARCSVIAAANPIGGRYDSSKTFTQNVELTDPIISRFDVLCVVKDIVDPFTDEMLARFVVDSHARSQPKGANLEDRVPTDVEDDPLAAARQADPDILSQDMLKKYITYAKLNVFPKIHDADLDKISHVYAELRRESSHGQGVPIAVRHIESIIRMSEAHARMHLRSYVSQEDVDMAIRVLLDSFISTQKFGVQKALQKNFRKYMTYKKDYNELLLLLLRTLVKDVLHFEEIVSGPTTRLTHIEVKVEDLKNKAQEYEIYDLRPFFSSAHFRDNNFVLDEGRGIIRHPLAA

Annotated regions:
phrase: KKFKEFLLTYVNPKNEQGEFEYVRLINEMVLANKCSLEIDYKQFIYIHPNIAIWLADAPQSVIEVMEEVAKNVVFDLHKNYRNIHQKIYVRIT
type: DOMAIN
name: MCM_N
description: MCM, N-terminal domain

phrase: DMLKKYITYAKLNVFPKIHDADLDKISHVYAELRRESSHGQGVPIAVRHIESIIRMSEAHARMHLRSYVSQEDVDMAIRVLLDS
type: DOMAIN
name: MCM_lid
description: MCM, AAA-lid domain

phrase: RGDINVLLLGDPGTA
type: DOMAIN
name: MCM_dom
description: MCM domain

phrase: GALVLADRGICLID
type: DOMAIN
name: MCM_dom
description: MCM domain

phrase: EAMEQQSISISKA
type: DOMAIN
name: MCM_dom
description: MCM domain

phrase: VIAAANPIGGRY
type: DOMAIN
name: MCM_dom
description: MCM domain

phrase: IISRFDVL
type: DOMAIN
name: MCM_dom
description: MCM domain

phrase: QIRNIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCSKCGTVLGPFFQNSYTEVKVGSCPECQSKGPFTINVEQTIYRNYQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGIYT
type: DOMAIN
name: MCM_OB
description: MCM OB domain

phrase: IGERIVKSIAPSIYGHEDIKTAIALAMFGGQEKNVKGKHRLRGDINVLLLGDPGTAKSQFLKYVEKTGHRAVYTTGKGASAVGLTAAVHKDPVTREWTLEGGALVLADRGICLIDEFDKMNDQDRVSIHEAMEQQSISISKAGIVTSLQARCSVIAAANPIGGRYDSSKTFTQNVELTDPIISRFDVLCVVKDIVDPFTDEMLARF
type: DOMAIN
name: MCM_dom
description: MCM domain

phrase: GICLIDEF
type: CONSERVED_SITE
name: MCM_CS
description: Mini-chromosome maintenance, conserved site

phrase: KAEIEKLAKDPRIGERIVKSIAPSIYGHEDIKTAIALAMFGGQEKNVKGKHRLRGDINVLLLGDPGTAKSQFLKYVEKTGHRAVYTTGKGASAVGLTAAVHKDPVTREWTLEGGALVLADRGICLIDEFDKMNDQDRVSIHEAMEQQSISISKAGIVTSLQARCSVIAAANPIGGRYDSSKTFTQNVELTDPIISRFDVLCVVKDIVDPFTDEMLARFVVDS
type: DOMAIN
name: MCM_dom
description: MCM domain
Protein sequence:
MKFLFYLSADNLEIARKEVLVLAERYGWVEDYQFEERLLLLDYAGEKFFERLAYTNEVTKIYDICSVSELEQVFSEIPVYDRLCCVRVKGGKGKTALERKLGALLWKRGAKVSVSNPEIVYKVYIQDDKCYVGLLEFERDTRQFFLRRPDRRPFLMPSAIKPKLARALVNLTGVLEGETLLDPMCGTGSFLIEAGLMGINPIGIDFIEKIVRGCRVNLEYYGIEGSVLLGDAKNLPLRDESVRGIATDYPYLRSTKAAGTLDELYSKTSEEFERVLKKGGRAAIVTNIDVESFFSNFEIEMKTEERVHGSLTRRIYLLRR

Annotated regions:
phrase: PDRRPFLMPSAIKPKLARALVNLTGVLEGETLLDPMCGTGSFLIEAGLMGINPIGIDFIEKIVRGCRVNLEYYGIEGSVLLGDAKNLPLRDESVRGIATDYPYLRSTKAAGTLDELYSKTSEEFERVLKKGGRAAIVTNIDVESFFSNFEIEMKTEERVHGSLTR
type: DOMAIN
name: RlmKL-like_Mtase
description: Ribosomal RNA large subunit methyltransferase K/L-like, methyltransferase domain

phrase: DPMCGTGSFLI
type: CONSERVED_SITE
name: RlmKL-like_Mtase_CS
description: Ribosomal RNA large subunit methyltransferase K/L-like, conserved site

phrase: EKFFERLAYTNEVTKIYDICSVSELEQVFSEIPVYDRLCCVRVKGGKGKTALERKLGALLWKRGAKVSVSNPEIVYKVYIQDDKCYVGLL
type: DOMAIN
name: THUMP_dom
description: THUMP domain
Protein sequence:
MENIVITNTSGGGGGGVPSSSTDPPNNTTTTTATASAIDLNMSLSPFLSSPSLSSPSIQSAKKKTIEDFIIGKVLGEGSYGAVVLGTEKETQQQYAIKILEKKQIIKENKIKYVQIEKEIFCKSNHPNIVKLFFTFRSEQCLYYVLELCSQGDLLHQIKKVGSFDYRSCQYYVAEIISGLEHLHSLGIVHRDLKPENILMSSDLHVKITDFGTGKILPPPQSSQQQQQQQQQQQQLPTNSSGNLSSLLNNVNNLSVSTDLTQQQQNRTSSVDSASTTDSMISPNLQPTTTTTNNNNNNNNNNNNNNNNTAAGSNTNTNTNTNINTNINANINNIKTTEIPKLTRNNSFVGTAEYVSPELISNKETSTDSDLWALGCIIYQMASGRVPFRGKTEFLTFQKVSNRELVYPINMNPVIKDLVEKLLVIKPTDRLGSSSTPGGFDNLKAHPFFQDFNWSSLSNMSHPPPPIQPPQEKIIFDGDELFSPSLDCTTPRNNNVDENHQQNSCNNNNNNNNNINNINNNNNSSSNNISNSNSNSNSSNNLNISNGNLSTPRSSSSSSSQQPTQRSGSSGGSRDGGSSSNNISKWLNNGENVIYQGLVWKRKGFSIKKRQLILTDTPRLIYIDPKKMELKGEIPWSDSIKPKLKSNNNFVIKTPKRKYLLEDVAHNPQKWVDSIKSVILSSGSSN

Annotated regions:
phrase: LGEGSYGAVVLGTEKETQQQYAI
type: BINDING_SITE
name: Protein_kinase_ATP_BS
description: Protein kinase, ATP binding site

phrase: VIYQGLVWKRKGFSIKKRQLILTDTPRLIYIDPKKMELKGEIPWSDSIKPKLKSNNNFVIKTPKRKYLLEDVAHNPQKWVDSIKSVILS
type: DOMAIN
name: PH_domain
description: Pleckstrin homology domain

phrase: NNISKWLNNGENVIYQGLVWKRKGFSIKKRQLILTDTPRLIYIDPKKMELKGEIPWSDSIKPKLKSNNNFVIKTPKRKYLLEDVAHNPQKWVDSIKS
type: DOMAIN
name: PDK1-typ_PH
description: PDK1-type, PH domain

phrase: IVHRDLKPENIL
type: ACTIVE_SITE
name: Ser/Thr_kinase_AS
description: Serine/threonine-protein kinase, active site

phrase: FIIGKVLGEGSYGAVVLGTEKETQQQYAIKILEKKQIIKENKIKYVQIEKEIFCKSNHPNIVKLFFTFRSEQCLYYVLELCSQGDLLHQIKKVGSFDYRSCQYYVAEIISGLEHLHSLGIVHRDLKPENILMSSDLHVKITDFGTGKILPPPQSSQQQQQQQQQQQQLPTNSSGNLSSLLNNVNNLSVSTDLTQQQQNRTSSVDSASTTDSMISPNLQPTTTTTNNNNNNNNNNNNNNNNTAAGSNTNTNTNTNINTNINANINNIKTTEIPKLTRNNSFVGTAEYVSPELISNKETSTDSDLWALGCIIYQMASGRVPFRGKTEFLTFQKVSNRELVYPINMNPVIKDLVEKLLVIKPTDRLGSSSTPGGFDNLKAHPF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: FIIGKVLGEGSYGAVVLGTEKETQQQYAIKILEKKQIIKENKIKYVQIEKEIFCKSNHPNIVKLFFTFRSEQCLYYVLELCSQGDLLHQIKKVGSFDYRSCQYYVAEIISGLEHLHSLGIVHRDLKPENILMSSDLHVKITDFGTGKILPPPQSSQQQQQQQQQQQQLPTNSSGNLSSLLNNVNNLSVSTDLTQQQQNRTSSVDSASTTDSMISPNLQPTTTTTNNNNNNNNNNNNNNNNTAAGSNTNTNTNTNINTNINANINNIKTTEIPKLTRNNSFVGTAEYVSPELISNKETSTDSDLWALGCIIYQMASGRVPFRGKTEFLTFQKVSNRELVYPINMNPVIKDLVEKLLVIKPTDRLGSSSTPGGFDNLKAHPF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: ISKWLNNGENVIYQGLVWKRKGFSIKKRQLILTDTPRLIYIDPKKMELKGEIPWSDSIKPKLKSNNNFVIKTPKRKYLLEDVAHNPQKWVDSIKS
type: DOMAIN
name: PDK1-typ_PH
description: PDK1-type, PH domain

phrase: TRNNSFVGTAEYVSPELISNKETSTDSDLWALGCIIYQMASGRVPFRGKTEFLTFQKVSNRELVYPINMNPVIKDLVEKLLVIKPTDRLGSSSTPGGFDNLKAHPF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: IGKVLGEGSYGAVVLGTEKETQQQYAIKILEKKQIIKENKIKYVQIEKEIFCKSNHPNIVKLFFTFRSEQCLYYVLELCSQGDLLHQIKKVGSFDYRSCQYYVAEIISGLEHLHSLGIVHRDLKPENILMSSDLHVKITDFGTGKILPPPQSS
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain
Protein sequence:
MLSDIEITHQTKLEHISKVAAKLGLNEDELELYGKFKAKISPRLEPSNSKLILVTATNPTPYGEGKTTMSIGLADALNSLNKKVCLALREPSLGPVFGIKGGAAGGGYSQLAPMEDLNLHFTGDFHAITSANNLISAMIDNSLYQENPLKIEKILWKRCMDMNDRALRFITVGQGGRTDGVPREDGFNITAASEIMAVLCLATSLSDLKERVANIMVAYDSDKKPIYVRDLGCEDAVCILLKDAIKPNLFQTLEHTPTLVHGGPFANIAHGCNSVIATKTALNLADYVITEAGFGSELGAEKFLDIKCRVAEIKPSAVVLVSTIRSLKYNGEANKDEITKPDMNALKKGIENLGGHIENLKGKFGQNVVVALNKFGFDTDEEINFVKEYCQKLGIEVAVCENFLKGGKGALELAELVLKACDKPSKINFTYEMSDDTKTKIEKVAKEIYGAGEVVFEEAALKKLEMIKELNLSHLPVCIAKTQYSFSDDAKLLGRAKGFTFSVKDLDIRTGAGFIVAVCGKIMLMPGLPKVPAAVNMKIDAEGKIDGLS

Annotated regions:
phrase: GIKGGAAGGG
type: CONSERVED_SITE
name: Formate_THF_ligase_CS
description: Formate-tetrahydrofolate ligase, FTHFS, conserved site
Protein sequence:
MKLKSLTKGLDVVVKGSKEVEITGVSADSRTVAPGNLFIAKKGAAHDGNQFISQAINAGACAIATDIYDPFLEVPQIIHSNTNLIEAKLASRYYGQPSKDLFVVGVTGSKGKTTTTYLIKHLLDALNKRSGLIGTIETIFAEHRFFSSMTTHDAITNQKWLKEMLNKGCKAAVLEVSSHGLAQGRVDEIDFDLGVFMNLYPDHLDFHKSIEEYAAAKRKLFEKAHHNILNADSPWAEFMGKGLTFGIEKGDLRAQKIVLSAEGSRFEVDGCEFSTPLIGKFNVYNAMAAIAVGVQVGASLHEIQHIMSHFDAVPGRMERIGNVFVDFAHTGEALENVLQTLKEIAKGRVIVVFGCGGQRDPGRRVSMAKAAQKWADISIITSDNPRKEDPNEIARQIVAEFQNKPHVELDRKKAIAIAIAMAGKDDMVVVAGRGHEKVQILAQQTVAFDDAETVKNILQNKVGLDAPSHSLL

Annotated regions:
phrase: EITGVSADSRTVAPGNLFIAKKGAAHDGNQFISQAINAGACAIAT
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: VTGSKGKTTTTYLIKHLLDALNKRSGLIGTIETIFAEHRFFSSMTTHDAITNQKWLKEMLNKGCKAAVLEVSSHGLAQGRVDEIDFDLGVFMNLYPDHLDFHKSIEEYAAAKRKLFEKAHHNILNADSPWAEFMGKGLTFGIEKGDLRAQKIVLSAEGSRFEVDGCEFSTPLIGKFNVYNAMAAIA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRMERIGNVFVDFAHTGEALENVLQTLKEIAKGRVIVVFGCGGQRDPGRRVSMAKAAQKWADISIITSDNPRKEDPNEIARQIVAEFQNKPHVELDRKKAIAIAIAMAGKDDMVVVAGR
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MAVLSGDEIRKLIQKEGLIRDYVDLETQIQPNGFDCTLRSVYRLRGCGRVDFDNSRRELPELEEVEFRDWVYLPKGVYRAKLNEVVRLGNDIMAIARPRSTLIRCGANVLTAVWDAGYEGRSEVSIVVHNDYGIWLSRNARIIQLVFIRLSSPTKGYEGVYKGENIDS

Annotated regions:
phrase: EFRDWVYLPKGVYRAKLNEVVRLGNDIMAIARPRSTLIRCGANVLTAVWDAGYEGRSEVSIVVHNDYGIWLSRNARIIQLV
type: DOMAIN
name: dUTPase_trimeric
description: dUTPase, trimeric