nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MPTKAKVAIVGSGNISTDLLYKLLRSDWLEPRWMVGIDPQSEGLARARKLGLETTHEGVDWLLAQPEKPDLVFEATSAYVHRDAAPKYEAAGIRAIDLTPAAVGPAVIPPANLRQHLDAPNVNMITCGGQATIPIVFAVSRVVEVPYAEIVASVASVSAGPGTRANIDEFTKTTSRGVETIGGAKRGKAIIILNPADPPMIMRDTIFCAIPEDADRDAIAQSIHDVVKEVQTYVPGYRLLNEPQFDEPSLNSGGQAVVTTFVEVEGAGDYLPPYAGNLDIMTAAATKVGEEIAKETLATTAGGAQ

Annotated regions:
phrase: KVAIVGSGNISTDLLYKLLRSDWLEPRWMVGIDPQSEGLARARKLGLETTHEGVDWLLAQPEKPDLVFEATSAYVHRDAAPKYEAAGIRAIDLTPAAVGPAVIPPANLRQHLD
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: CGGQATIPIVFAVSRVVEVPYAEIVASVASVSAGPGTRANIDEFTKTTSRGVETIGGAKRGKAIIILNPADPPMIMRDTIFCAIPEDADRDAIAQSIHDVVKEVQTYVPGYRLLNEPQFDEPSLNSGGQAVVTTFVEVEGAGDYL
type: DOMAIN
name: Acetylaldehyde_DH_C
description: Acetaldehyde dehydrogenase, C-terminal
Protein sequence:
MNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNNARPPTVQIRGQPVAQKNGCCST

Annotated regions:
phrase: YLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFM
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain
Protein sequence:
MEKDHQPVISLRPGGGGGGPRPGRLFSPAFAAAASGSGDLLRSHVGGASKIGDPNFEVRERVRYTRDQLLELREIVDIPEAILRINQEIDIELHGEDQIWGRPESDVQVQTQTQAQPHNRYGETDNRDWRARTVQPPAANEEKSWDNIREAKAAHASSGRQQEQVNRQDQLNHQFASKAQVGPTPALIKAEVPWSARRGNLSEKDRVLKTVKGILNKLTPEKFDLLKGQLMESGITTADILKDVISLIFEKAVFEPTFCPMYAQLCSDLNEKLPSFPSEEPGGKEITFKRVLLNNCQEAFEGAESLRAEIAKLTGPDQEMERRDKERIVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGSGPDKKACPEEENVEAICQFFNTIGKQLDENPKSRRINDTYFIQMKELTTNLQLAPRLRFMVRDVVDLRSNNWVPRREEIKAKTISEIHDEAMKTLGLRPGATGLTRNGRNAPGGPLSPGGFPMNRPGTGGMMPGMPGTPGMPGSRKMPGMPGLDNDNWEVPRSKSMPRGDSLRNQGPLLNKPSSINKPSSINSRLLPHGSGALIGKSALLGSGGPPSRPSSLMASLTHTPAQTAPSPKPVSAAPAVVPVTDKAAGSSHEMPAAVQKKTVSLLEEYFGIRILDEAQQCIEELQCPEYYSEIVKEAINLALDKGPNFIDPLVRLLEHLHAKKIFKTEDLKTGCLLYAALLEDIGIDLPLAPALFGEVVARLSLSCGLSFEVVEEILKAVEDTYFRKGIFDAVMKTMGGNSSGQAILSSHAVVIDACNKLLK

Annotated regions:
phrase: QKKTVSLLEEYFGIRILDEAQQCIEELQCPEYYSEIVKEAINLALDKGPNFIDPLVRLLEHLHAKKIFKTEDLKTGCLLYAALLEDIGIDLPLAPALFGEVVARLSLSCG
type: DOMAIN
name: Initiation_fac_eIF4g_MI
description: Initiation factor eIF-4 gamma, MA3

phrase: LKTVKGILNKLTPEKFDLLKGQLMESGITTADILKDVISLIFEKAVFEPTFCPMYAQLCSDLNEKLPSFPSEEPGGKEITFKRVLLNNCQEAFEGAESLRAEIAKLTGPDQEMERRDKERIVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGSGPDKKACPEEENVEAICQFFNTIGKQLDENPKSRRINDTYFIQMKELTTNLQLAPRLRFMVRDVVDLRSN
type: DOMAIN
name: MIF4G-like_typ-3
description: MIF4G-like, type 3

phrase: LKTVKGILNKLTPEKFDLLKGQLMESGITTADILKDVISLIFEKAVFEPTFCPMYAQLCSDLNEKLPSFPSEEPGGKEITFKRVLLNNCQEAFEGAESLRAEIAKLTGPDQEMERRDKERIVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGSGPDKKACPEEENVEAICQFFNTIGKQLDENPKSRRINDTYFIQMKELTTNLQLAPRLRFMVRDVVDLRSN
type: DOMAIN
name: MIF4G-like_typ-3
description: MIF4G-like, type 3

phrase: VQKKTVSLLEEYFGIRILDEAQQCIEELQCPEYYSEIVKEAINLALDKGPNFIDPLVRLLEHLHAKKIFKTEDLKTGCLLYAALLEDIGIDLPLAPALFGEVVARLSLSCGL
type: DOMAIN
name: Initiation_fac_eIF4g_MI
description: Initiation factor eIF-4 gamma, MA3

phrase: AVQKKTVSLLEEYFGIRILDEAQQCIEELQCPEYYSEIVKEAINLALDKGPNFIDPLVRLLEHLHAKKIFKTEDLKTGCLLYAALLEDIGIDLPLAPALFGEVVARLSLSCGLSFEVVEEIL
type: DOMAIN
name: Initiation_fac_eIF4g_MI
description: Initiation factor eIF-4 gamma, MA3
Protein sequence:
MLQKRGRGLLVLLLMLLEWTRPGLLSPLRPICDLRVLNHFIKEARDAEVAMKSCTEGCSLSESVTVPQTRVDFDVWEKKNGLEQAQEVQSGLWLLQQALNLLRTSVTNTALHSHIDNSIRNLLSINAVLRSLNIQEYTPPASTVALEGTWRVSSATDLLQVHVNFLRGKVRLLLLDAQACQQDVS

Annotated regions:
Protein sequence:
MFQKKAIVIDGKGHLLGRLASVVAKSLLSGQKIVVVRCEELNISGPLSRNKLKWADFLNLTMNTNHARGHRHGRSPSKIFWRAVRGMLPHKTPRGQAALDNMKVFEGVPAPYDKVKRVVVPSALRVVKLNTTRKYTVLSRLSQEVGWKYRAVVAKLEVQRKQRSSTYYRKAALVKAYRTQALKKFSA

Annotated regions:
phrase: VRGMLPHKTPRGQAALDNMKVFE
type: CONSERVED_SITE
name: Ribosomal_uL13_CS
description: Large ribosomal subunit protein uL13, conserved site
Protein sequence:
MSNFTHINASGEANMVDVSAKQETVREARAEAFVHMAPETLKLIVSGSHHKGDVFATARIAGIQAAKKTWDLIPLCHPLLLTKVEVQLEAIEAENMVRIESVCKLTGKTGVEMEALTAASVAALTIYDMCKAVQKDMVISQVRLLEKTGGKSGHFKADA

Annotated regions:
phrase: MVDVSAKQETVREARAEAFVHMAPETLKLIVSGSHHKGDVFATARIAGIQAAKKTWDLIPLCHPLLLTKVEVQLEAIEAENMVRIESVCKLTGKTGVEMEALTAASVAALTIYDMCKAVQKDMVISQVRLLEKTG
type: DOMAIN
name: Mopterin_CF_biosynth-C_dom
description: Molybdopterin cofactor biosynthesis C (MoaC) domain
Protein sequence:
ALLLIVLIVGGIRGGVFTPTEASVVAVFYAIVTSAFVYRGFTLADLWGAFLRSAIMSVAVLMILAAARAFAWVLIIEGVPQMADAVIAMDLSPIAFLLMVNLLLLVFGMFMDPLPGVMILVPILAPFATARIARDHFAIIVIVNLTFGLMTPPVGGLIFVVPRDPAEPSALIREQPPFFLAAMASLLILTFVPALSTWLPQISFAR

Annotated regions:
phrase: ALLLIVLIVGGIRGGVFTPTEASVVAVFYAIVTSAFVYRGFTLADLWGAFLRSAIMSVAVLMILAAARAFAWVLIIEGVPQMADAVIAMDLSPIAFLLMVNLLLLVFGMFMDPLPGVMILVPILAPFATARIARDHFAIIVIVNLTFGLMTPPVGGLIFVVPRDPAEPSALIREQPPFFLAAMASLLILTFVPA
type: DOMAIN
name: DctM
description: TRAP C4-dicarboxylate transport system permease DctM subunit
Protein sequence:
MAELEFEKPVVELRNKIRELKDYTKNSQMDFSEEIRILEEKLENLEEDIYGNLKVWDRVQIARHAERPTTLDYIEHLFTDFFECHGDRLFGDDAAIVGGIAKYKGMPVTVIGHQRGKDTKENIRRNFGMPHPEGYRKALRLMKQAEKFNRPIICFIDTKGAYPGKAAEERGQSEAIARNLFEMAGLTVPVICIVIGEGGSGGALGLGVGDYIHMLENSTYSVITPEGAAAILWKDAGKAKEAAEAMKITAADLKELGVIDEIIPEARGGAHRNVLKQSENIDLMIRKTFEQLNGISKDELIEKRYEKYMKIGQVSFSNASIWIK

Annotated regions:
phrase: ILEEKLENLEEDIYGNLKVWDRVQIARHAERPTTLDYIEHLFTDFFECHGDRLFGDDAAIVGGIAKYKGMPVTVIGHQRGKDTKENIRRNFGMPHPEGYRKALRLMKQAEKFNRPIICFIDTKGAYPGKAAEERGQSEAIARNLFEMAGLTVPVICIVIGEGGSGGALGLGVGDYIHMLENSTYSVITPEGAAAILWKDAGKAKEAAEAMKITAADLKELGVIDEIIPEARGGAHRNVLKQSENIDLMIRKTFE
type: DOMAIN
name: COA_CT_C
description: Acetyl-coenzyme A carboxyltransferase, C-terminal
Protein sequence:
MKLLASTVLMGAAAASIAPQQQVLKNPFQSASKPISEAWSKSMESLNHLTDSMKDMTSEAKAVWDEVSTLFPEAMDRATFFQQPKPHTRKPDTAWDYVVKGADIQNVWVENSKGEKEREIDGKLEKYNMRAKKVDPTKLGVDKVKQYSGYLDDEENDKHLFYWFFESRNDPKNDPVVLWLNGGPGCSSLTGLFLELGPASIDKNGKLHNNPYSWNANASVIFLDQPVNVGYSYSGGSVSNTIAAGKDVYALLTLFFKQFPEYAKQDFHIAGESYAGHYIPVFTHEILSHKKRNINLKSVLIGNGLTDGLTQYEHYRPMACGEGGYPAVLDSSECKAMDNALPRCQSLIQSCYDSESVWSCVPASIYCNNAMMGPYQRTGQNVYDIRGKCEDSSNLCYSALGWISDYLNQAAVQKELGVEVSSYDSCNFDINRNFLFQGDWMQPFHRLVPDILEQIPVLIYAGDADFICNWLGNQAWTEALEWPGQKGFNAAKTKDLQLENGHKTGTFKSSGNFTFARIFGAGHMVPMDQPEASLDFLNKWLNDYTL

Annotated regions:
phrase: IAGESYA
type: ACTIVE_SITE
name: Ser_caboxypep_ser_AS
description: Serine carboxypeptidase, serine active site

phrase: FTFARIFGAGHMVPMDQ
type: ACTIVE_SITE
name: Ser_caboxypep_his_AS
description: Serine carboxypeptidases, histidine active site

phrase: MKLLASTVLMGAAAASIAPQQQVLKNPFQSASKPISEAWSKSMESLNHLTDSMKDMTSEAKAVWDEVSTLFPEAMDRATFFQQPKPHTRKPDTAWDYVVKGADIQ
type: DOMAIN
name: Propeptide_carboxypepY
description: Propeptide, carboxypeptidase Y
Protein sequence:
MTAETGQTQTLGGLGLTAHGGRDVVITGIAVDSREVREGYLFAAMPGTRLHGAEFIQYALRQGARAVLTDAEGARIAERDLAESDAALVIAEDPRQALAGAAALWFQKQPRIVTAVTGTNGKTSVASFLRQIWMLVGREAVNLGTTGVEGSYSAPLMHTTPEPITLHRMMAELAEAGITHAAMEASSHGLAQRRLDGVMLRVGAFTNLTQDHLDYHHDVEEYFHAKAGLFTRVLTPDAAAVINVDGLRGVDMAEVAADRGLDVLTVGSHEDAELRILGRRFDADSQTMRFSFDGEVHQVQLNLIGGFQAENVLVAAGMAILSGEDPDQVFTVLPALSTVHGRMELAARRTNGAAVFVDYAHTPDAVATALKALRPHVLGRLVAVIGAGGDRDRTKRPLMGEAAAAHADLVFVTDDNPRSEDPAAIRQAVLLGCPDATEVADRAEAILRAVDALAPGDALLIAGKGHETGQIIGDTVFPFDDTEQASVAVSALDGRLP

Annotated regions:
phrase: ITGIAVDSREVREGYLFAAMPGTRLHGAEFIQYALRQGARAVLTDAEGARIAERDLAESDAALVIAEDPRQALAGAA
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: VTGTNGKTSVASFLRQIWMLVGREAVNLGTTGVEGSYSAPLMHTTPEPITLHRMMAELAEAGITHAAMEASSHGLAQRRLDGVMLRVGAFTNLTQDHLDYHHDVEEYFHAKAGLFTRVLTPDAAAVINVDGLRGVDMAEVAADRGLDVLTVGSHEDAELRILGRRFDADSQTMRFSFDGEVHQVQLNLIGGFQAENVLVAAGM
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRMELAARRTNGAAVFVDYAHTPDAVATALKALRPHVLGRLVAVIGAGGDRDRTKRPLMGEAAAAHADLVFVTDDNPRSEDPAAIRQAVLLGCPDATEVADRAEAILRAVDALAPGDALLIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MTDLTLAALKTAPLAQVRQYLLHLLATHAYKEGDFILSSGQPSTYYINGKLVTLRAEGALAIGRLLLTELPDQVEAVAGLTLGADPIVSAVSTVSAYEEKPVVALIIRKEAKGHGTKAYIEGPELAPGTKVVVLEDVVTTGKSAMLAVERLRNAGYQVDTVISLVDRQQGGREFYQSQGLTFQALFTIGDIQQVYRQK

Annotated regions:
phrase: HLLATHAYKEGDFILSSGQPSTYYINGKLVTLRAEGALAIGRLLLTELPDQVEAVAGLTLGADPIVSAVSTVSAYEEKPVVALIIRKEAKGHGTKAYIEGPELAPGTKVVVLEDVVTTGKSAMLAVERLRNAGYQVDTVISLVDRQQGGREFYQSQGLTFQALFTIGD
type: DOMAIN
name: Or_phspho_trans_dom
description: Orotate phosphoribosyl transferase domain

phrase: IGRLLLTELPDQVEAVAGLTLGADPIVSAVSTVSAYEEKPVVALIIRKEAKGHGTKAYIEGPELAPGTKVVVLEDVVTTGKSAMLAVERLRNAGYQVDTVISLVDRQQGGREFYQSQGLTFQALF
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain
Protein sequence:
MSDNVQQQVDSVGSVTEKLQKTNISRPRKYIPPFARDKPSAGAAPAVGDDESVSSRGSSRSQTPSEFSSNYGGRREYNRGGHYGGGEGRQNNYRGGREGGYSNGGGYRNNRGFGQWRDGQHVIGARNTLLERQLFGAVADGTKVSTGINFEKYDDIPVEVSGGDIEPVNEFTSPPLNSHLLQNIKLSGYTQPTPVQKNSIPIVTSGRDLMACAQTGSGKTAGFLFPILSLAFDKGPAAVPVDQDAGMGYRPRKAYPTTLILAPTRELVCQIHEESRKFCYRSWVRPCAVYGGADIRAQIRQIDQGCDLLSATPGRLVDLIDRGRISLANIKFLVLDEADRMLDMGFEPQIRHIVEGADMTSVEERQTLMFSATFPRDIQLLARDFLKDYVFLSVGRVGSTSENITQKVVHVEDSEKRSYLLDILHTLPPEGLTLIFVETKRMADTLTDYLLNSNFPATSIHGDRTQRERERALELFRSGRTSIMVATAVASRGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGQAVAFFNRNNKGIAKELIELLQEANQECPSFLIAMARESSFGGNGRGGRYSGRGGRGGNAYGARDFRRPTNSSSGYSSGPSYSGYGGFESRTPHHGNTYNSGSAQSWW

Annotated regions:
phrase: NITQKVVHVEDSEKRSYLLDILHTLPPEGLTLIFVETKRMADTLTDYLLNSNFPATSIHGDRTQRERERALELFRSGRTSIMVATAVASRGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRAGNTGQAVAFFNRNNKGIAKELIELLQEANQECPSFLIAM
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: DTLTDYLLNSNFPATSIHGDRTQRERERALELFRSGRTSIMVATAVASRGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRA
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: TPVQKNSIPIVTSGRDLMACAQTGSGKTAGFLFPILSLAFDKGPAAVPVDQDAGMGYRPRKAYPTTLILAPTRELVCQIHEESRKFCYRSWVRPCAVYGGADIRAQIRQIDQGCDLLSATPGRLVDLIDRGRISLANIKFLVLDEADRMLDMGFEPQIRHIVEGADMTSVEERQTLMFSATFPRDI
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: IPIVTSGRDLMACAQTGSGKTAGFLFPILSLAFDKGPAAVPVDQDAGMGYRPRKAYPTTLILAPTRELVCQIHEESRKFCYRSWVRPCAVYGGADIRAQIRQIDQGCDLLSATPGRLVDLIDRGRISLANIKFLVLDEADRMLDMGFEPQIRHIVEGADMTSVEERQTLMFSATFPRDIQLLARDFLKDYVF
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: FTSPPLNSHLLQNIKLSGYTQPTPVQKNSIPIVTSGRDLMACAQTGSGKTAGFLFPILSLAFDKGPAAVPVDQDAGMGYRPRKAYPTTLILAPTRELVCQIHEESRKFCYRSWVRPCAVYGGADIRAQIRQIDQGCDLLSATPGRLVDLIDRGRISLANIKFLVLDEADRMLDMGFEPQIRHIVEGADMTSVEERQTLMFSATFPRDIQLLARDFLKDYVFLSVGRV
type: DOMAIN
name: Ded1/Dbp1_DEADc
description: Ded1/Dbp1, DEAD-box helicase domain

phrase: NEFTSPPLNSHLLQNIKLSGYTQPTPVQ
type: DOMAIN
name: RNA_helicase_DEAD_Q_motif
description: RNA helicase, DEAD-box type, Q motif

phrase: GYTQPTPVQKNSIPIVTSGRDLMACAQTGSGKTAGFLFPILSLAFDKGPAAVPVDQDAGMGYRPRKAYPTTLILAPTRELVCQIHEESRKFCYRSWVRPCAVYGGADIRAQIRQIDQGCDLLSATPGRLVDLIDRGRISLANIKFLVLDEADRMLDMGFEPQIRHIVEGADMTSVEERQTLMFSATFPRDIQLLARDFLKDYVFLSVGRVGSTSENITQ
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: VLDEADRM
type: CONSERVED_SITE
name: RNA-helicase_DEAD-box_CS
description: ATP-dependent RNA helicase DEAD-box, conserved site

phrase: KRSYLLDILHTLPPEGLTLIFVETKRMADTLTDYLLNSNFPATSIHGDRTQRERERALELFRSGRTSIMVATAVASRGLDIPNVTHVINYDLPTDIDDYVHRIGRTGRA
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like
Protein sequence:
MKLHEYQARDIVARYGIPVTGGGVAATAEEVQKVAEQIGGPVAVKAQVHVGGRGKAGGIKLANTPAEAFDAGKAILGMDIKGLTVEKVLVAEAITFEKEIYLGVILDRATKRVVLIASSEGGVEIEEVAKINPDAIIKLAADPLLGLQPYQAQELAYSIGITDAKQARQFSSIATGLYRAFVENDAELAEINPLVVLPNGQLQALDSKIVLDDSGLFRHSEVAGMRDIAGEPESEIKARENGLTFIKLDGNIGCMVNGAGLAMATMDVVNLFGGEPANFLDIGGGANAQKVAAALDIILDDPNVKVVMVNIFGGITRCDEVAKGIVEAQKIIKRQVPMVVRLVGTNEAEGQRILADASLTPASTLADAAQKAVDIAKQ

Annotated regions:
phrase: KLHEYQARDIVARYGIPVTGGGVAATAEEVQKVAEQIGGPVAVKAQVHVGGRGKAGGIKLANTPAEAFDAGKAILGMDIKGLTVEKVLVAEAITFEKEIYLGVILDRATKRVVLIASSEGGVEIEEVAKINPDAIIKLAADPLLGLQPYQAQELAYSIGITDAKQARQFSSIATGLYRAFVENDAELAEINPLV
type: DOMAIN
name: ATP-grasp_succ-CoA_synth-type
description: ATP-grasp fold, succinyl-CoA synthetase-type

phrase: RDIVARYGIPVTGGGVAATAEEVQKVAEQIGGPVAVKAQVHVGGRGKAGGIKLANTPAEAFDAGKAILGMDIKGLTVEKVLVAEAITFEKEIYLGVILDRATKRVVLIASSEGGVEIEEVAKINPDAIIKLAADPLLGLQPYQAQELAYSIGITDAKQARQFSSIATGLYRAFVENDAELAEINPLVVLPNGQLQALDSKIVLDDSGLFRHSE
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold

phrase: GNIGCMVNGAGLAMATMDVVNLFGG
type: CONSERVED_SITE
name: Succ-CoA_synthase_bsu_CS
description: Succinyl-CoA synthetase, beta subunit, conserved site

phrase: MVNGAGLAMATMDVVNLFGGEPANFLDIGGGANAQKVAAALDIILDDPNVKVVMVNIFGGITRCDEVAKGIVEAQKIIKRQVPMVVRLVGTNEAEGQRILADASLTPASTLADAAQK
type: DOMAIN
name: SUCC_ACL_C
description: ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain
Protein sequence:
MAANEKTYLSETAKVDQSSVQPFPNSSKIYVEGSRSDIRVPMREISLADTPTDFGGEQNRPVRVYDTSGPYTDPEVQIDLRTGLPDVRSRWINERGDTEALAEKSSLFATQRLNDPALASLRFQHLRTPRRAKSGANVSQMHYARQGIITPEMEYIAIRENMSLQQAREQGVLQEQHAGQAFGAAIPDEITPEFVRSEVARGRAIIPANINHPELEPMIIGRNFLVKINGNIGNSALGSSIEEEVAKLTWGTRWGADTIMDLSTGKNIHETREWIIRNASVPIGTVPIYQALEKVDGIAEDLTWDIFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAHHQENFLYTHFEDICEIMKAYDVSFSLGDGLRPGSIADANDEAQFGELETLGELTKIAWQHDVQTMIEGPGHVPMQMIKENMDKQLRECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWYGCAMLCYVTPKEHLGLPNKDDVKEGIITYKIAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNLGLDPDTARAYHDETLPKESAKVAHFCSMCGPKFCSMKITQEVRDYAAEHGTEITPRAPGEAEEVVRMVDVEAEMQKKSDEFRAQGSEIYSKV

Annotated regions:
phrase: PFPNSSKIYVEGSRSDIRVPMREISLADTPTDFGGEQNRPVRVYDTSGPYTDPEVQIDLRTGLPDVRSRWINERGDT
type: DOMAIN
name: ThiC-associated_dom
description: ThiC-associated domain
Protein sequence:
MSMFCYQCQEAAGGRGCTVKGVCGKTEDIAKTQDLIIYVVKGIAIYSSQVREIGLNTSEADKFIVESLFSTITNANFDAKALNARVQEGLKIRQSLKDAIIKAGGSYNSKENKSWTSKFLSVLGIKNDKDEKEIHDAAVWAANNPEDFKKKAETVGVLATENEDIRSLRELLTYGLKGMAAYLEHANNLGYDEDSIHAFMEKALVATLDDTLSADELTALVLECGKYGVDVMALLDKANTSTYGNPEITKVNIGVRNNPGILISGHDLKDMEELLKQTEGTGVDVYTHSEMLPANYYPAFKKYKHFVGNYGNAWWKQNEEFEAFNGPILMTTNCIVTPKASYKDRMYTTGVTGFEGVKHINASKDGKKDFSEIIEHAKRCSSPKEIEKGEIIGGFAHNQVLALAPQVVDAVKTGAIKRFFVMAGCDGRMKSRNYYTDFAKALPKDTVILTAGCAKYKYNKLDLGDINGIPRVLDAGQCNDSYSLAVIALKLKEVFELEDINELPISYNIAWYEQKAVIVLLALLHLGVKNIHLGPTLPAFLSPNVAKILVENFGIGTISSVDEDIKMFMN

Annotated regions:
Protein sequence:
MFRLSHYLDQLYHPTPPRIARGTPKPVVIWNLTRRCNLKCKHCYTVSADVDFPGELTAAQARETLEDIGRFKVPALILSGGEPLLRDDLFALAKRARALTRVLALSTNGTGVIGSKADRVAEIGFDYVGISIDGIGATNDAFRGVIGAYEQALAGVRSCKRRGIKVGLRFTITEQNESQLPELLKLCDDEGVDKFYLSHLVYAGRGNKNRGEDADHARTRRAMDLLIARALESAEGRGHPLEIVTGNNDADAVYFLNWAKANFPAAQVAHLRKHLEAWGGNASGVGVANIDTQGDVHPDTYWSEYTVGSVKQTPFSELWTGPDPMLAELRRRPRPLKGRCGACAHQAVCGGNTRIRALQLTGDPWAEDPACYLTAAETGTATDIDRLTVRPFIGDRHDPKPAFV

Annotated regions:
phrase: NLTRRCNLKCKHCYTVSADVDFPGELTAAQARETLEDIGRFKVPALILSGGEPLLRDDLFALAKRARALTRVLALSTNGTGVIGSKADRVAEIGFDYVGISIDGIGATNDAFRGVIGAYEQALAGVRSCKRRGIKVGLRFTITEQNESQLPELLKL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: PVVIWNLTRRCNLKCKHCYTVSADVDFPGELTAAQARETLEDIGRFKVPALILSGGEPLLRDDLFALAKRARALTRVLALSTNGTGVIGSKADRVAEIGFDYVGISIDGIGATNDAFRGVIGAYEQALAGVRSCKRRGIKVGLRFTITEQNESQLPELLKLCDDEGVDKFYLSHLVYAGRGNKNRGEDADHARTRRA
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: GTPKPVVIWNLTRRCNLKCKHCYTVSADVDFPGELTAAQARETLEDIGRFKVPALILSGGEPLLRDDLFALAKRARALTRVLALSTNGTGVIGSKADRVAEIGFDYVGISIDGIGATNDAFRGVIGAYEQALAGVRSCKRRGIKVGLRFTITEQNESQLPELLKLCDDEGVDKFYLSHLVYAGRGNKNRGEDADHARTRRAMDLLIARALESA
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MKHVLVIDDDVAMRHLIVEYLTIHAFKVTAVADSKQFNRVLSSETVDVAVVDLNLGREDGLEIVRTLATKSDVPMIIISGDRLEEADKVVALELGATDFIAKPFGTREFLARIRVALRERPSVARTKDRRSFYFADWTLNIRQRRLISEEGGEIKLTAGEFNLLVAFLEKPRDVLSREQLLIASRVREEEVYDRSIDVLIFRLRRKLEGDPTSPQLIKTARGAGYFFDADVNVSYGGMMAA

Annotated regions:
phrase: VLVIDDDVAMRHLIVEYLTIHAFKVTAVADSKQFNRVLSSETVDVAVVDLNLGREDGLEIVRTLATKSDVPMIIISGDRLEEADKVVALELGATDFIAKPFGTREFLARI
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: RRSFYFADWTLNIRQRRLISEEGGEIKLTAGEFNLLVAFLEKPRDVLSREQLLIASRVREEEVYDRSIDVLIFRLRRKLEGDPTSPQLIKTARGAGYFFD
type: DOMAIN
name: OmpR/PhoB-type_DNA-bd
description: OmpR/PhoB-type DNA-binding domain

phrase: GEIKLTAGEFNLLVAFLEKPRDVLSREQLLIASRVREEEVYDRSIDVLIFRLRRKLEGDPTSPQLIKTARGAGYF
type: DOMAIN
name: OmpR/PhoB-type_DNA-bd
description: OmpR/PhoB-type DNA-binding domain

phrase: HVLVIDDDVAMRHLIVEYLTIHAFKVTAVADSKQFNRVLSSETVDVAVVDLNLGREDGLEIVRTLATKSDVPMIIISGDRLEEADKVVALELGATDFIAKPFGTREFLARIRVA
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: WTLNIRQRRLISEEGGEIKLTAGEFNLLVAFLEKPRDVLSREQLLIASRVREEEVYDRSIDVLIFRLRRKLEGDPTSPQLIKTARGAGYF
type: DOMAIN
name: OmpR/PhoB-type_DNA-bd
description: OmpR/PhoB-type DNA-binding domain

phrase: GGEIKLTAGEFNLLVAFLEKPRDVLSREQLLIASRVREEEVYDRSIDVLIFRLRRKLEGDPTSPQLIKTARGAGYF
type: DOMAIN
name: OmpR/PhoB-type_DNA-bd
description: OmpR/PhoB-type DNA-binding domain

phrase: KHVLVIDDDVAMRHLIVEYLTIHAFKVTAVADSKQFNRVLSSETVDVAVVDLNLGREDGLEIVRTLATKSDVPMIIISGDRLEEADKVVALELGATDFIAKPFGTREFLAR
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain
Protein sequence:
MYLSRLELTDFRSYRRAALELDPGVNVFVGSNGQGKTNLVEAVCYLALLRSHRTATDAPLVRQGSERAVLHGEVLTSGRRIDLDVEIVPGRANRLRVNGHATRRARDLVGILRVVIFAPEDLALVKGDPAARRDYLDDVLVELRPRLFAVRAEYEKALRQRNAFLRAVAQDGQQVDRNSLDVWNLHFARAAAALLDARRRLVHELAPFVEKAYAAISGGSGAVRLEYRSTVPEEVLQDADEETRIAGILAALRKVQDAELARGLTLVGPHRDDLNLELDSRPARGYASHGESWSYALALRLGAYELLRSDGETPVMILDDVYAELDQQRRRRLTGCVSGAEQLLITSAVDEPDLPVGRRYVVHESQVHVAD

Annotated regions:
phrase: FAPEDLALVKGDPAARRDYL
type: CONSERVED_SITE
name: DNA-binding_RecF_CS
description: DNA-binding, RecF, conserved site

phrase: YLSRLELTDFRSYRRAALELDPGVNVFVGSNGQGKTNLVEAVCYLALLRSHRTATDAPLVRQGSERAVLHGEVLTSGRRIDLDVEIVPGRANRLRVNGHATRRARDLVGILRVVIFAPEDLALVKGDPAARRDYLDDVLVELRPRLFAVRAEYEKALRQRNAFLRAVAQDGQQVDRNSLDVWNLHFARAAAALLDARRRLVHELAPFVEKAYAAISGGSGAVRLEYRSTVPEEVLQDADEETRIAGILAALRKVQDAELARGLTLVGPHRDDLNLELDSRPARGYASHGESWSYALALRLGAYELLRSDGETPVMILDDVYAELDQQRRRRLTGCVSGAEQLLITS
type: DOMAIN
name: RecF/RecN/SMC_N
description: RecF/RecN/SMC, N-terminal

phrase: VMILDDVYAELDQQRRRR
type: CONSERVED_SITE
name: DNA-binding_RecF_CS
description: DNA-binding, RecF, conserved site
Protein sequence:
MLEEINYDTKLFGLIGKNIKYTLSPYIHNFSFTTLGINAVYLVFDLDEMKFNRIINGLLEIAEGLNVTIPYKEEVMKYLDNTDTYSTRIQAVNTIYKKGGYNTDYLAIKNLVRKKIGNMSGYECYVYGAGGAAKAAAFALSELGCSSISIVNRTNLRANELVELLNKNGYNASIKENCNSTSNIVVVNSTPNPSVVPENCIQKSELVIEFVYKPVETELIKNAKKYGIKYIDGLEILVNQAVEAEKIWFNKSVSDEKIIEYLYARKLVW

Annotated regions:
phrase: LIGKNIKYTLSPYIHNFSFTTLGINAVYLVFDLDEMKFNRIINGLLEIAEGLNVTIPYKEEVMKYLDNTDTYSTRIQAVNT
type: DOMAIN
name: Shikimate_DH-bd_N
description: Shikimate dehydrogenase substrate binding, N-terminal

phrase: LVRKKIGNMSGYECYVYGAGGAAKAAAFALSELGCSSISIVNRTNLRANELVELLNKNGYNASIKENCNSTSN
type: DOMAIN
name: Shikm_DH/Glu-tRNA_Rdtase
description: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase
Protein sequence:
MSSKLLTIQLLEELVHAAELNQEGKTADYIPELANVNQELTAIAVQTLGEKTLAYSNNPLHPVTLQSTGKMIPLIGLLEEFGADQLFEWVKVEPSGDDFASITRLEQFGPKPSNPMLNAGAIALCSRIPGVGEQQFRWLEHWVQKLFNQRLSINPLVFASEKRTGNRNRALAYLLKSRNNLGADVHETLDLYFALCSYEAMLDQMLYLPTLLANSGKDSDTGEQILSMETCKITLAIMATCGLYDETGTHMVKTGMPAKSGVSGYTIAVVPGKAGIVVLSPRVNAKGNSIRGEIMLEGLSKAMNWHFALP

Annotated regions:
Protein sequence:
MRKNRAEKRDVLADPIYNSKLVTRAINKIMLDGKRGIAQSIIYDAFNIIKEKTNKEPIEVFNKAIENIKPHLELKVRRIGGANYQVPVEVSAERQITLALRWLINYARLRNEKVMTIKLANEIIDASNNIGGSVKKREDTHKMAEANKAFAHYRW

Annotated regions:
phrase: MRKNRAEKRDVLADPIYNSKLVTRAINKIMLDGKRGIAQSIIYDAFNIIKEKTNKEPIEVFNKAIENIKPHLELKVRRIGGANYQVPVEVSAERQITLALRWLINYARLRNEKVMTIKLANEIIDASNNIGGSVKKREDTHKMAEAN
type: DOMAIN
name: Ribosomal_uS7_dom
description: Small ribosomal subunit protein uS7 domain

phrase: SKLVTRAINKIMLDGKRGIAQSIIYD
type: CONSERVED_SITE
name: Ribosomal_uS7_CS
description: Small ribosomal subunit protein uS7, conserved site
Protein sequence:
MLVLFVATWSDLGLCKKRPKPGGWNTGGSRYPGQGSPGGNRYPPQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQGGGTHNQWHKPSKPKTSMKHMAGAAAAGAVVGGLGGYMLGSAMSRPLIHFGNEYEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNITIKQHTVTTTTKGENFTETDVKMMERVVEQMCITQYEKESQAYYQRGSSMVLFSSPPVILLISFLIFLIVG

Annotated regions:
phrase: PPQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQGGG
type: REPEAT
name: Prion_copper_b_octapeptide
description: Prion, copper binding octapeptide repeat region

phrase: ETDVKMMERVVEQMCITQ
type: DOMAIN
name: Prion/Doppel_prot_b-ribbon_dom
description: Prion/Doppel protein, beta-ribbon domain

phrase: MSRPLIHFGNEYEDRYYRENMYRYPNQVYYRPVDQYSNQNNFVHDCVNITIKQHTVTTTTKGENFTETDVKMMERVVEQMCITQYEKESQAYYQRGSSMVLFSSPPVILLISFLIFL
type: DOMAIN
name: Prion/Doppel_prot_b-ribbon_dom
description: Prion/Doppel protein, beta-ribbon domain

phrase: MLVLFVATWSDLGLCKKRPK
type: DOMAIN
name: Prion_N
description: Major prion protein N-terminal

phrase: AGAAAAGAVVGGLGG
type: DOMAIN
name: Prion/Doppel_prot_b-ribbon_dom
description: Prion/Doppel protein, beta-ribbon domain
Protein sequence:
MKAVIFIMDGLGDRPNKDGNTPLKEAKTPIMDKMAKDGICGLMNAVDVGVRPGSDTAHLAILGYDPYTTYTGRGPFEACGVGVTVKPGDIAFRCNFSSVDENFIVTDRRAGRIENTSELEKELDGLKIDDVEIIFKESGGYRAALVLRGPGLSDRISDADPKKEGKRVKEIHPLDDSKEAKKTAEIVNRLLKIAYEKLDKHPVNEERRKQNLPVANMIVPRGVGQVPEIMPFTEKTGLKGACIAGTGLIKGIAKMVGLDVIDVEGCDGTPNSDLMAKACAIVETLKNYDFILVNVKGADEAGHDGNYELKKEIIERIDEMLDYITKNISKDEVYFVISGDHSTPIEEMDHSADPLPIVIWGKSVRVDDVEKFDEFSTHKGGLNWIKGTNIMPILMDLMSIAKKYGA

Annotated regions:
phrase: MKAVIFIMDGLGDRPNKDGNTPLKEAKTPIMDKMAKDGICGLMNAVDVGVRPGSDTAHLAILGYDPYTTYTGRGPFEACGVGVTVKPGDIAFRCNFSSVDENFIVTDRRAGRIENTSELEKELDGLKIDDVEIIFKESGGYRAALVLRGPGLSDRISDADPKKEGKRVKEIHPLDDSKEAKKTAEIVNRLLKIAYEKLDKHPVNEERRKQNLPVANMIVPRGVGQVPEIMPFTEKTGLKGACIAGTGLIKGIAKMVGLDVIDVEGCDGTPNSDLMAKACAIVETLKNYDFILVNVKGADEAGHDGNYELKKEIIERIDEMLDYITKNISKDEVYFVISGDHSTPIEEMDHSADPLPIVIWGKSVRVDDVEKFDEFSTHKGGLNWIKGTNIMPILM
type: DOMAIN
name: Metalloenzyme
description: Metalloenzyme
Protein sequence:
MWQPRRPWPRVPWRWALALLALVGAGLCHAGPQPGYPARPSARNKNWCAYIVNKNVSCSVLEGSESFIQAQYNCAWNQMPCPSALVYRVNFRPRYVTRYKTVTQLEWRCCPGFRGGDCQEGPKDPVKTLRPTPARPRNSLKKATDNEPSQFSEPRKTLSPTGTAQPSWGVDPKEGPQELQEKKIQVLEEKVLRLTRTVLDLQSSLAGVSENLKHATQDDASRTRAPGLSSQHPKPDTTVSGDTETGQSPGVFNTKESGMKDIKSELAEVKDTLKNKSDKLEELDGKVKGYEGQLRQLQEAAQGPTVTMTTNELYQAYVDSKIDALREELMEGMDRKLADLKNSCEYKLTGLQQQCDDYGSSYLGVIELIGEKETSLRKEINNLRARLQEPSAQANCCDSEKNGDIGQQIKTLDQKIERVAEATRMLNGRLDNEFDRLIVPEPDVDFDAKWNELDARINVTEKNAEEHCFYIEETLRGAINGEVGDLKQLVDQKIQSLEDRLGSVLLQMTNNTGAELSPPGAAALPGVSGSGDERVMMELNHLKDKVQVVEDICLLNIQGKPHGMEGALPNREDRAVRDSLHLLKSLNDTMHRKFQETEQTIQKLQQDFSFLYSQLNHTENDVTHLQKEMSNCRAGENAGMGRFTKVGEQERTVDTLPSPQHPVAHCCSQLEERWQRLQSQVISELDACKECTQGVQREVSMVEGRVSHMEKTCSKLDSISGNLQRIKEGLNKHVSSLWNCVRQMNGTLRSHSRDISGLKNSVQQFYSHVFQISTDLQDLVKFQPSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPGRRPVLPQRPPEERPPQPPGSTGVIAETGQAGPPAGAGVSGRGLPRGVDGQTGSGTVPGAEGFAGAPGYPKSPPVASPGAPVPSLVSFSAGLTQKPFPSDGGVVLFNKVLVNDGDVYNPSTGVFTAPYDGRYLITATLTPERDAYVEAVLSVSNASVAQLHTAGYRREFLEYHRPPGALHTCGGPGAFHLIVHLKAGDAVNVVVTGGKLAHTDFDEMYSTFSGVFLYPFLSHL

Annotated regions:
phrase: ASPGAPVPSLVSFSAGLTQKPFPSDGGVVLFNKVLVNDGDVYNPSTGVFTAPYDGRYLITATLTPERDAYVEAVLSVSNASVAQLHTAGYRREFLEYHRPPGALHTCGGPGAFHLIVHLKAGDAVNVVVTGGKLAHTDFDEMYSTFSGVFLYP
type: DOMAIN
name: C1q_dom
description: C1q domain

phrase: KNWCAYIVNKNVSCSVLEGSESFIQAQYNCAWNQMPCPSALVYRVNFRPRYVTRYKTVTQLEWRCCPGFR
type: DOMAIN
name: EMI_domain
description: EMI domain

phrase: PVPSLVSFSAGLTQKPFPSDGGVVLFNKVLVNDGDVYNPSTGVFTAPYDGRYLITATLTPERDAYVEAVLSVSNASVAQLHTAGYRREFLEYHRPPGALHTCGGPGAFHLIVHLKAGDAVNVVVTGGKLAHTDFDEMYSTFSGVFLYPFLS
type: DOMAIN
name: C1q_dom
description: C1q domain

phrase: NKNWCAYIVNKNVSCSVLEGSESFIQAQYNCAWNQMPCPSALVYRVNFRPRYVTRYKTVTQLEWRCCPGFRGGDCQ
type: DOMAIN
name: EMI_domain
description: EMI domain

phrase: FSAGLTQKPFPSDGGVVLFNKVLVNDGDVYNPSTGVFTAPYDGRYLITATLTPERDAYVEAVLSVSNASVAQLHTAGYRREFLEYHRPPGALHTCGGPGAFHLIVHLKAGDAVNVVVTGGKLAHTDFDEMYSTFSG
type: DOMAIN
name: C1q_dom
description: C1q domain