nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MMNRIITANLANLASSLMLAQVLGWHEPVYPDQVKWAGLGTGVCASGYRPLTRDEAMSIKGNLVSRMGQWQITGLADRWVIMGPGYNGEIKQGTAGETWCYPNSPVSGEIPTLSDWNIPAGDEVDVQWRLVHDNDYFIKPVSYLAHYLGYAWVGGNHSPYVGEDMDVTRVGDGWLIKGNNDGGCSGYRCGEKSSIKVSNFSYTLEPDSFSHGQVTESGKQLVKTITANATNYTDLPQQVVVTLKYDKATNWSKTDTYSLSEKVTTKNKFQWPLVGETELAIEIAASQSWASQKGGSTTETVSVEARPTVPPHSSLPVRVALYKSNISYPYEFKAEVNYDLTMKGFLRWGGNAWYTHPDNRPTWEHTFRLGPFRGQGEQHPLPVDKRYIPGEVKWWDWNWTISEYGLSTMQNNLGRVLRPIRSAVTGDFYAESQFAGDIEIGQPQTRSAKAAQLRSASAEEVALTSVDLDSEALANEGFGNVSLTIVPVQ

Annotated regions:
phrase: DEVDVQWRLVHDNDYFIKPVSYLAHYLGYAWVGGNHSPYVGEDMDVTRVGDGWLIKGNNDGGCSGYRCGEKSSIKVSNFSYTLEPDSFSHGQVTESGKQLVKTITANATNYTDLPQQVVVTLKYDKATNWSKTDTYSLSEKVTTKNKFQWPLVGETELAIEIAASQSWASQKGGSTTETVSVEARPTVPPHSSLPVRVALYKSNISYPYEFKAEVNYDLTMKGFLRWGGNAWYTHPDNRPTWEHTFRLGPFRGQGEQHPLPVDKRYIPGEVKWWDWNWTISEYGLSTMQNNLGRVLRPIRSAVTGDFYAESQFAGDIEIGQPQTRSAKAAQLRSAS
type: DOMAIN
name: Aerolysin-like_C
description: Aerolysin-like, C-terminal

phrase: EPVYPDQVKWAGLGTGVCASGYRPLTRDEAMSIKGNLVSRMGQWQITGLADRWVIMGPGYNGEIKQGTAGETWCYPNSP
type: DOMAIN
name: APT_dom
description: Aerolysin/Pertussis toxin domain

phrase: KATNWSKTD
type: CONSERVED_SITE
name: Aerolysin/haemolysin_CS
description: Aerolysin/haemolysin toxin, conserved site

phrase: GDEVDVQWRLVHDNDYFIKPVSYLAHYLGYAWVGGNHSPYVGEDMDVTRVGDGWLIKGNNDGGCSGYRCGEKSSIKVSNFSYTLEPDSFSHGQVTESGKQLVKTITANATNYTDLPQQVVVTLKYDKATNWSKTDTYSLSEKVTTKNKFQWPLVGETELAIEIAASQSWASQKGGSTTETVSVEARPTVPPHSSLPVRVALYKSNISYPYEFKAEVNYDLTMKGFLRWGGNAWYTHPDNRPTWEHTFRLGPFRGQGEQHPLPVDKRYIPGEVKWWDWNWTISEYGLSTMQNNLGRVLRPIRSAVTGDFYAESQFAGDIEIGQPQTRSAKAAQLRSASAEEVALTSVDLDSEALA
type: DOMAIN
name: Aerolysin-like_C
description: Aerolysin-like, C-terminal
Protein sequence:
MPIGVPKVPFRNPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGIAIYDTMQFVPPDIHTICMGLAASMGSFLLVGGEITKRLAFPHARVMIHQPASSFYEAQTGEFILEAEELLKLRETVTRVYVQRTGNPLWVVSEDMERDVFMSAIEAQAHGIVDLVAVENSGDLT

Annotated regions:
phrase: RLAFPHARVMIHQ
type: ACTIVE_SITE
name: ClpP_His_AS
description: ClpP, histidine active site

phrase: TICMGLAASMG
type: ACTIVE_SITE
name: ClpP_Ser_AS
description: ClpP, Ser active site
Protein sequence:
MKNIKDLLERLDYTIVQGSLDGDITELVYDSRKVTKDCIFVCMKGATFDSHSVAADVVANGAKVLVVEADVDVPEEVTVVKVADTREALAMLSAAYFDYPGDTLKVIGITGTKGKTTTTYMVKAILENAGYKVGLIGTVETIIGEEHIPALNTTPESYIVQESFAKMLSAGCDVCVMEVSSQGLMMHRVDGFTFEIGIFTNIEPDHIGPNEHKDFEDYLHCKSLLFQKCKKGIFNKDDEHLEQILEGHTCEVETYGFAQDADFYADNMELIHKPGYLGVAYDVKGLENFHVEIPVPGRFSVYNSLTAIAICHHFNVTVENMQKALAVAKAKGRIEMIKVSDEFALMIDYAHNAMALESLLSTLKEYNPGRLVCLFGCGGNRSKLRRFEMGEVSGRLADFTIITSDNPRFEDPLAIMADIETGIAKTNGKHISIADRKEAIKYAIEHGQPRDIIVLAGKGHEDYQEIEGKKYPMDERVLIQEVLQELGRA

Annotated regions:
phrase: GRIEMIKVSDEFALMIDYAHNAMALESLLSTLKEYNPGRLVCLFGCGGNRSKLRRFEMGEVSGRLADFTIITSDNPRFEDPLAIMADIETGIAKTNGKHISIADRKEAIKYAIEHGQPRDIIVLAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: ITGTKGKTTTTYMVKAILENAGYKVGLIGTVETIIGEEHIPALNTTPESYIVQESFAKMLSAGCDVCVMEVSSQGLMMHRVDGFTFEIGIFTNIEPDHIGPNEHKDFEDYLHCKSLLFQKCKKGIFNKDDEHLEQILEGHTCEVETYGFAQDADFYADNMELIHKPGYLGVAYDVKGLENFHVEIPVPGRFSVYNSLTAIA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: ITELVYDSRKVTKDCIFVCMKGATFDSHSVAADVVANGAKVLVVEADVDVPEEVTVVKVADTREALAMLSAA
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain
Protein sequence:
MWSKCSISGVLGWRKVRRRVRSSEPAAVGVGAASRDLEKHGALTSSNTADNNPDCAWLEAQEDEEVGFPVKPQVPLRPMTYKGALDLSHFLKEKGGLEGLVYSQRRQDILDLWIYHTQGYFPDWQNYTPGPGIRYPLTFGWCFKLVPVEPDKVEEANEGENNHLLDPMSQHGMDDPEKEVLVWKFDSRLAFHHMARELHPEYYKNC

Annotated regions:
Protein sequence:
MRVRGILRNYRQWWIWGILGFWIMIYNVVGKEKKEEDLWVTVYYGVPVWKEAKTTLFCASDAKGYEREMHNVWATHACVPTDPDPQEMLLENVTENFNIWENDMVDQMHEDIISLWDQSLKPCVQLTPLCVTLNCSNATITFRNDTSPNNNSKGNVTHIPTEEMKNCSFNTTTEIRDRKKKEYALFYRLDLEPLNEGKNNSGKRNNSYDEYILINCNTSTIAQACPKISFEPIPIHYCAPAGYAILKCNNKTFNGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLSEGEMIIKSKNLTNNAKTVIVHFNQSIEIVCTRPNNNTRQSVRIGPGKAFYTTGDIIGDTRKAHCNITKANWTDTLQQVAKKLAEYYPNVTINFTQPVRGGDPEITMHTFNCGGEFFYCNTSNLFNMTYIWKNGSYVLNNIDNNDTTITLQCRIKQFINMWQRVGRAMYAPPIAGNITCVSNITGLLLTHDGIKTNRSSDSNWTWTFRPGGGNMKDNWSNELYKYKVVEIKPLGIAPTKAKRRVVEREKRAVGIGAVIFGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLKAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTSNVKWNKTWSNKELGDIWNNLTWMQWDKEIDNYTDIIYQLLEDSQIQQEKNEQDLLALDSWQNLWNWFDISKWLWYIKIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQTLTPNPGDPNRLRGIEEEGGEQDRDR

Annotated regions:
phrase: MGAASITLTVQARQLLSGIVQQQSNLLKAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTSNVKWNKTWSNKELGDIWNNLTWMQWDKEIDNYTDIIYQLLEDSQIQQEKNEQDLLALDSWQNLWNWFDISKWLWYIKIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKEAKTTLFCASDAKGYEREMHNVWATHACVPTDPDPQEMLLENVTENFNIWENDMVDQMHEDIISLWDQSLKPCVQLTPLCVTLNCSNATITFRNDTSPNNNSKGNVTHIPTEEMKNCSFNTTTEIRDRKKKEYALFYRLDLEPLNEGKNNSGKRNNSYDEYILINCNTSTIAQACPKISFEPIPIHYCAPAGYAILKCNNKTFNGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLSEGEMIIKSKNLTNNAKTVIVHFNQSIEIVCTRPNNNTRQSVRIGPGKAFYTTGDIIGDTRKAHCNITKANWTDTLQQVAKKLAEYYPNVTINFTQPVRGGDPEITMHTFNCGGEFFYCNTSNLFNMTYIWKNGSYVLNNIDNNDTTITLQCRIKQFINMWQRVGRAMYAPPIAGNITCVSNITGLLLTHDGIKTNRSSDSNWTWTFRPGGGNMKDNWSNELYKYKVVEIKPLGIAPTKAKRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: VQARQLLSGIVQQQSNLLKAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTSNVKWNKTWSNKELGDIWNNLTWMQWDKEIDNYTDIIYQLLEDSQIQQEKNEQDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MSDADLPNDGGIKLVMAIIRPDKLADVKTALAEVGAPSLTVTNVSGRGSQPAKKSQWRGEEYTVDLHQKVKVECVVADTPAEDVADAIADAAHTGEKGDGKIFILPVENAIQVRTGKTGRDAV

Annotated regions:
phrase: TGEKGDGKIFILP
type: CONSERVED_SITE
name: N-reg_PII_CS
description: Nitrogen regulatory protein PII, conserved site
Protein sequence:
MGRVSWIIALYLTINVVIVVNGDRVTRNVEVTAEEEKIRDKLGYEAIRDIHRDMDDDHSGSIDRNESTGFMKEDMQMRGSERTRRENKFHGDDDAITVDDLWEAWFESIERTWTNERLVEWLINDVNLPSIVEAVKAKKIDGKILPRFASPNSDFLNKELGIKSSVYRQKLRLNSLDVVLFGYKDNNNRTKDILLAFLALLLTSLIFLYVRQKQKAQQKVNELSNKLTELKCMETEFEDVQKMLNDERSKRSISDGVVNHTEMENLRVQLEEAERRLEANSNGSQAPLALQPLLRRTCENEMAFLEKQRQDCFKEMKEAIEMVDRLQKKQGSVLSSLKLATGAASTSDQVDSKIFALKSRMEKIHTLTRETQERWLQIESLCGFPLLYLNETEHINRSIASSHFYNKSHEGSSSSGSISNAHSNPNAVNSNFVKKVSPPIPPSQQTANLRFVPTEQSDSIHSEDTSPIVEDVAISRSLTQDLAEADMQSIVSGSTNGSGSVAALKKRKGIFPKLFRRNTSKSSSLGGTSN

Annotated regions:
phrase: TWTNERLVEWLINDVNLPSIVEAVKAKKIDGKILPRFASPNSDFLNKELGIKSSVYRQK
type: DOMAIN
name: SAM
description: Sterile alpha motif domain

phrase: QAPLALQPLLRRTCENEMAFLEKQRQDCFKEMKEAIEMVDRLQKKQGSVLSSLKLATGAASTSDQVDSKIFALKSRMEKIHTLTRETQERWLQIESLCGFP
type: DOMAIN
name: SOAR
description: Stromal interaction molecule, Orai1-activating region

phrase: LQPLLRRTCENEMAFLEKQRQDCFKEMKEAIEMVDRLQKKQGSVLSSLKLATGAASTSDQVDSKIFALKSRMEKIHTLTRETQERWLQIESLC
type: DOMAIN
name: SOAR
description: Stromal interaction molecule, Orai1-activating region
Protein sequence:
MVQGTTSDAGKSTVVAGLCRVLARAGMRVAPFKPQNMALNSAVTADGGEIGRAQALQAQAARVEPHTDMNPVLLKPSSDTGAQIIIHGKARLDLDARAYHAYKPEAMKAVLASHERLTQAYDVVVVEGAGSPAEINLRDRDIANMGFAERVDCPVVLVADIDRGGVFAHLVGTLDCLSDSERARVTGFIINRFRGDISLLQPGLDWLEARTGKPVFGVLPYLHGLHLDAEDAIVGAQSAKRGTPDALLRVIVPVLPRISNHTDFDALRAHPQVDLRFIGPGMPVPPADLVILPGSKSVRADLDFLRANGWEPALRRHLRYGGKVIGICGGMQMLGRQIHDPAGHEGPAGSSAGFGWLDYETTLAPHKQLRRVSGRLADADREAAVSGYEIHMGVSTGSGLERPALWLDDENGTRRADGACSEDGQVLATYVHGVFDEPTACEGLLRWAGLDGAQGIDLAALREASIERLADTLASHLDLGAMFAPLRR

Annotated regions:
phrase: MVQGTTSDAGKSTVVAGLCRVLARAGMRVAPFKPQNMALNSAVTADGGEIGRAQALQAQAARVEPHTDMNPVLLKPSSDTGAQIIIHGKARLDLDARAYHAYKPEAMKAVLASHERLTQAYDVVVVEGAGSPAEINLRDRDIANMGFAERVDCPVVLVADIDRGGVFAHLVGTLDCLSDSERARVTGFIINRFRGDISLLQPGLDWLEARTGKPVFGVLPYLHG
type: DOMAIN
name: CobQ/CobB/MinD/ParA_Nub-bd_dom
description: CobQ/CobB/MinD/ParA nucleotide binding domain

phrase: MVQGTTSDAGKSTVVAGLCRVLARAGMRVAPFKPQNMALNSAVTADGGEIGRAQALQAQAARVEPHTDMNPVLLKPSSDTGAQIIIHGKARLDLDARAYHAYKPEAMKAVLASHERLTQAYDVVVVEGAGSPAEINLRDRDIANMGFAERVDCPVVLVADIDRGGVFAHLVGTLDCLSDSERARVTGFIINRFRGDISLLQPGLDWLEARTGKPVFGVL
type: DOMAIN
name: CobQ_N
description: Cobyric acid synthase, N-terminal domain

phrase: RVIVPVLPRISNHTDFDALRAHPQVDLRFIGPGMPVPPADLVILPGSKSVRADLDFLRANGWEPALRRHLRYGGKVIGICGGMQMLGRQIHDPAGHEGPAGSSAGFGWLDYETTLAPHKQLRRVSGRLADADREAAVSGYEIHMGVSTGSGLERPALWLDDENGTRRADGACSEDGQVLATYVHGVFDE
type: DOMAIN
name: GATase_3
description: CobB/CobQ-like glutamine amidotransferase

phrase: VIVPVLPRISNHTDFDALRAHPQVDLRFIGPGMPVPPADLVILPGSKSVRADLDFLRANGWEPALRRHLRYGGKVIGICGGMQMLGRQIHDPAGHEGPAGSSAGFGWLDYETTLAPHKQLRRVSGRLADADREAAVSGYEIHMGVSTGSGLERPALWLDDENGTRRADGACSEDGQVLATYVHGVFDEPTACEGL
type: DOMAIN
name: CobQ_GATase1
description: Cobyric acid synthase, glutamine amidotransferase type 1
Protein sequence:
MIREERLLKVLKAPHISEKSTMVAEKQNTIVFKVAVDATKAEVKAAVAKLFEVEVETVRTLNMKGKTKRAGARVGRRSDWKKAYVTLKAGQDIDFMGAAE

Annotated regions:
phrase: KKAYVTLKAGQDIDF
type: CONSERVED_SITE
name: Ribosomal_uL23_CS
description: Large ribosomal subunit protein uL23, conserved site
Protein sequence:
MSPMLATLPDVTAVLHSPSASPPSGLRAPAAVGMGMARTRFLAPRAAASAASAVSAKPAAVAPLYADRTVVRIGLPSKGRMSEQTLSLLKSCQLSVRHLNPRQYTADIPQVPNLEVWFQRPKDIVRKLQSGDLDLGIVGFDIVSEYGQGSDDLVVVHDALEFGHCRLSLAVPKEGIFENINTLEDLANMPEWTQERPLRVVTGFGYLGEKFMRENGFNHVSFLAGDGALESYPAMGMADVIVDLVSSGTTLRENNLKEIDGGVVLESQATLVACRRSLHKRNGVLEITHEMLERLEAHLTATGEIMVTANMRGNSAEEVAERVLSQTSLCGLQGPTISPVYRSRDGKVAVEYYAINVVVPQKSLYKSIQQLRSIGGSGVLVTKLTYIFDEETPRWRKLLSELGL

Annotated regions:
phrase: ATGEIMVTANMRGNSAEEVAERVLSQTSLCGLQGPTISPVYRSRDGKVAVEYYAINVVVPQKSLYKSIQQLRSIGGSGVLVTKL
type: DOMAIN
name: HisG_C
description: Histidine biosynthesis HisG, C-terminal

phrase: VRIGLPSKGRMSEQTLSLLKSCQLSVRHLNPRQYTADIPQVPNLEVWFQRPKDIVRKLQSGDLDLGIVGFDIVSEYGQGSDDLVVVHDALEFGHCRLSLAVPKEGIFENINTLEDLANMPEWTQERPLRVVTGFGYLGEKFMRENGFNHVSFLAGDGALESYPAMGMADVIVDLVSSGTTLRENNLKEIDGGVVLESQATLV
type: DOMAIN
name: ATP_PRibTrfase_cat
description: ATP phosphoribosyltransferase, catalytic domain

phrase: ESYPAMGMADVIVDLVSSGTT
type: CONSERVED_SITE
name: ATP_PRibTrfase_CS
description: ATP phosphoribosyltransferase, conserved site

phrase: EITHEMLERLEAHLTATGEIMVTANMRGNSAEEVAERVLSQTSLCGLQGPTISPVYRSRDGKVAVEYYAINVVVPQKSLYKSIQQLRSIGGSGVLVTKLTY
type: DOMAIN
name: HisG_C
description: Histidine biosynthesis HisG, C-terminal

phrase: RPKDIVRKLQSGDLDLGIVGFDIVSEYGQGSDDLVVVHDALEFGHCRLSLAVPKEGIFENINTLEDLANMPEWTQERPLRVVTGFGYLGEKFMRENGFNHVSFLAGDGALESYPAMGMADVIVDLVSSGTTLRENNLKEIDGGVVLESQATLVACRRSLHKRNGVLEITHEMLER
type: DOMAIN
name: ATP_PRibTrfase_cat
description: ATP phosphoribosyltransferase, catalytic domain
Protein sequence:
MEVMEGPLNLAHQQSRRADRLLAAGKYEEAISCHKKAAAYLSEAMKLTQSEQAHLSLELQRDSHMKQLLLIQERWKRAQREERLKAQQNTDKDAAAHLQTSHKPSAEDAEGQSPLSQKYSPSTEKCLPEIQGIFDRDPDTLLYLLQQKSEPAEPCIGSKAPKDDKTIIEEQATKIADLKRHVEFLVAENERLRKENKQLKAEKARLLKGPIEKELDVDADFVETSELWSLPPHAETATASSTWQKFAANTGKAKDIPIPNLPPLDFPSPELPLMELSEDILKGFMNN

Annotated regions:
phrase: MEGPLNLAHQQSRRADRLLAAGKYEEAISCHKKAAAYLSEAMKLTQSEQAHLSLELQRDSHMKQLLLIQERWKRAQREERLK
type: DOMAIN
name: NRBF2_MIT
description: Nuclear receptor-binding factor 2, MIT domain

phrase: NTDKDAAAHLQTSHKPSAEDAEGQSPLSQKYSPSTEKCLPEIQGIFDRDPDTLLYLLQQKSEPAEPCIGSKAPKDDKTIIEEQATKIADLKRHVEFLVAENERLRKENKQLKAEKARLLKGPIEKELDVDADFVETSELWSLPPHAETATASSTWQKFAANTGKAKDIPIPNLPPLDFPSPELPLMELSEDILKG
type: DOMAIN
name: NRBF2_C
description: Nuclear receptor-binding factor 2, C-terminal
Protein sequence:
MRLSEFHLHTTKEIPADAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVRDEMNRAGAVEMLLPTIQPRELWEESERWEKFGNQLLKIKDRKQAEYCYSPTAEEAVTDYVRQELTSYKQLPVNLYQIQTKFRDEIRPRFGVMRAREFVMKDAYSFHLNDADLVREYENMRATYTRIFTRLGLEFRAVQADSGAIGGDASQEFHVIADSGEDVLAFSTGSDYAANIEAAIAATPGPRLTANETLQKVSTPTQKRCEDVAALLDIPLQRVVKSIAVMTDSGFFLALLRGDHTLNDIKLSKLPGLANFRLANEVEIARHLGSEPGFLGPVCPGMPIRIIADCEVAVMADFVVGANEVGFHLVGVNWGRDLPEPEVVADIRNVIEGDRAVDGGKICIARGIEVGHVFQLGRKYAEAMKATVLDEYGKAVTMTMGCYGIGVSRIVAAAIEQNHDVAGIIWPASIAPWQVAVCVINPKKDPVITAAAEVLLAELQSADVDTVLDDRGLRPGVMFADMELIGIPHRIVVSERGLAAGTYEYRARHTAMVENLDKTTLLMRIKA

Annotated regions:
phrase: PTQKRCEDVAALLDIPLQRVVKSIAVMTDSGFFLALLRGDHTLNDIKLSKLPGLANFRLANEVEIARHLGSEPGFLGPVCPGMPIRIIADCEVAVMADFVVGANEVGFHLVGVNWGR
type: DOMAIN
name: YbaK/aa-tRNA-synth-assoc-dom
description: YbaK/aminoacyl-tRNA synthetase-associated domain

phrase: DAELVSHRLMLRAGMIRKLASGLYTWSPLGLRVLRKVEAIVRDEMNRAGAVEMLLPTIQPRELWEESERWEKFGNQLLKIKDRKQAEYCYSPTAEEAVTDYVRQELTSYKQLPVNLYQIQTKFRDEIRPRFGVMRAREFVMKDAYSFHLNDADLVREYENMRATYTRIFTRLGLEFRAVQADSGAIGGDASQEFHVIADSGEDVLAFSTGSDYAANIEAAIAATPGPRLTANETLQKVSTPTQKRCEDVAALLDIPLQRVVKSIAVMTDSGFFLALLRGDHTLNDIKLSKLPGLANFRLANEVEIARHLGSEPGFLGPVCPGMPIRIIADCEVAVMADFVVGANEVGFHLVGVNWGRDLPEPEVVADIRNVIEGDRAVDGGKICIARGIEVGHVFQLGRKYAEAMKATVLDEYGKAVTMTMGCYGIGVSRIVAAAIE
type: DOMAIN
name: ProRS_core_prok
description: Prokaryote proline-tRNA ligase core domain

phrase: QVAVCVINPKKDPVITAAAEVLLAELQSADVDTVLDDRGLRPGVMFADMELIGIPHRIVVSERGLAAGTYEYRARHTAMVENLDKTTLLMRI
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: PWQVAVCVINPKKDPVITAAAEVLLAELQSADVDTVLDDRGLRPGVMFADMELIGIPHRIVVSERGLAAGTYEYRARHTAMVENLDKTTLLMRI
type: DOMAIN
name: ProRS_anticodon_short
description: Proline--tRNA ligase, anticodon binding domain

phrase: GLYTWSPLGLRVLRKVEAIVRDEMNRAGAVEMLLPTIQPRELWEESERWEKFGNQLLKIKDRKQAEYCYSPTAEEAVTDYVRQELTSYKQLPVNLYQIQTKFRDEIRPRFGVMRAREFVMKDAYSFHLNDADLVREYENMRATYTRIFTRLGLEFRAVQADSGAIGGDASQEFHVIADSGEDVLAFSTGSDYAANIEAAIAATPGPRLTANETLQKVSTPTQKRCEDVAALLDIPLQRVVKSIAVMTDSGFFLALLRGDHTLNDIKLSKLPGLANFRLANEVEIARHLGSEPGFLGPVCPGMPIRIIADCEVAVMADFVVGANEVGFHLVGVNWGRDLPEPEVVADIRNVIEGDRAVDGGKICIARGIEVGHVFQLGRKYAEAMKATVLDEYGKAVTMTMGCYGIGVSRIVAAAIEQNHDVAGIIW
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: KIKDRKQAEYCYSPTAEEAVTDYVRQELTSYKQLPVNLYQIQTKFRDEIRPRFGVMRAREFVMKDAYSFHLNDADLVREYENMRATYTRIFTRLGLEFRAVQADSGAIGGDASQEFHVIADSGEDVLAFSTGSDYAANIEAAIAATPGPRLTANETLQKVSTPTQKRCEDVAALLDIPLQRVVKSIAVMTDSGFFLALLRGDHTLNDIKLSKLPGLANFRLANEVEIARHLGSEPGFLGPVCPGMPIRIIADCEVAVMADFVVGANEVGFHLVGVNWGRDLPEPEVVADIRNVIEGDRAVDGGKICIARGIEVGHVFQLGRKYAEAMKATVLDEYGKAVTMTMGCYGIGVSRIVAAAIEQ
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
Protein sequence:
MSTPLSLQALAKKILATQHISKNHYFILKYCGLWWHGAPIMFSTNEDNQLMIKSAIFKDGLELNLALMKAVQENNYDLIELFTEWGADINSSLVTVNTEHTWNFCRELGAKILNEMDIVQIFYKIHRIKTSSNIILCHKLLSNNPLFQNIEELKIIICCFLEKISINFILNEITLNEMLARLWYSMAVRYHLTEAIQYFYQRYRHFKDWRLICGLSFNNVSDLHEIYHIKKVDMNIDEMMYLACMRDSNFLTIFYCFVLGANINRAMVTSVKNFYTNNLFFCIDLGANAFEESLELAKQKNHDILVEILSFKDFYNSNVSLLSLKTTDPEKINALLKNYRSKNIMRYKKLCPKIIRWARFII

Annotated regions:
Protein sequence:
MTEQVQANEAETLAAGADERIIRETGIDAKVASIIEPVINTLGFRLVRVRLSGLNGQTLQIMAERPDGTMTVDDCELVSRTVAPVLDVEDPISGKYHLEISSPGIDRPLVRKSDFADWAGHIAKVETSVVHEGRKKFRGRIVLGDAESVVIESDQISYGSEPVVRIPFDLISDARLVLTDDLIRDALRKDKALREGRIPGDDLGSEEAGEQSDETASGEAEDKE

Annotated regions:
phrase: GIDRPLVRKSDFADWAGHIAKVETSVVHEGRKKFRGRIVLGDAESVVIESDQISYGSEPVVRIPFDLISDARLVLT
type: DOMAIN
name: RimP_C
description: Ribosome maturation factor RimP, C-terminal

phrase: IIEPVINTLGFRLVRVRLSGLNGQTLQIMAERPDGTMTVDDCELVSRTVAPVLDVEDPISGKYHLEISSPGI
type: DOMAIN
name: RimP_N
description: Ribosome maturation factor RimP, N-terminal

phrase: LVRKSDFADWAGHIAKVETSVVHEGRKKFRGRIVLGDAESVVIESDQISYGSEPVVRIPFDLISDARLVL
type: DOMAIN
name: RimP_C
description: Ribosome maturation factor RimP, C-terminal
Protein sequence:
MASDYSFDIVSEVNLPEVKNAVNQALKEISQRYDFKGSNVEIELNEKEKEIRITADDEYRLKRAVDVLEAKLVKRQVSLKFLDYGKIEPALGGTVKQTIKLKSGIPREKAKEIIDTIKQTKLKVQTQILDDKLRVSGKKKDDLQAVIKLLKEKEFGLVLQFTNYR

Annotated regions:
Protein sequence:
MSCSHLSTAWSSSALASSASTTRRRSPPRSGLLVRCSLRELRTRIDSVRNTQKITEAMKLVAAAKVRRAQEAVVSSRPFSEALVEVLYNMNQEIQTEDIDLPLTRTRPVKKVALVVLTGERGLCGSFNNNVLKKAETRIDELKQLGLQYTVVSVGKKGNAYFQRRPYIPLERDLEVSSVPTVKDSQAICDLVYSLFVSEEVDKVELLYSKFVSLVRSDPIIQTLLPMSPKGEICDVNGVCVDATEDELFRLTTKEGKLTVEREKVKIETQPFSPVVQFEQDPVQILDALLPLYLNSQILRALQESLASELAARMSAMSSATDNAIELRKNLSIAYNRQRQAKITGEILEIVAGADALAG

Annotated regions:
phrase: ITGEILEIVAGAD
type: CONSERVED_SITE
name: ATP_synth_F1_gsu_CS
description: ATP synthase, F1 complex, gamma subunit conserved site
Protein sequence:
MSSLVVNNKLVKHAVQIHKFGGSSLASIECVNRVVEIIQHNCQLHDIVVVSANGDITDDLIEIYQFALQNSEQLHQSIEQLKQKQRDLVFGLLNESNAEALFAELLCDFELLAKWLQIDISEHEAELLAFGECWSARLLAAILAERVCPSFAIDSREFLVINNDVDCQVDYDVSQNHLSQLLDVQKLAVITGYIAKNTLGLPCTLGRNGSDYSATIIAALTNAQNVTLWTDVDGIYSADPRVVPLSRKLHRVPRSVAKELGRLGNPVLHAKTLQPLERVGSHLHVASSFDPDMPGTEVGDFGQIAKQELSVTYANDLLLVQSESFVGESGQLAFHKFSAISGDLDDGQLVIHLSQQKAVSEWLASDDTEVKFTPVSVMAIVGHNVARRGNVKARFKRALKHHQPIAFFNQLHSDSLVSVLPQPCTGELLNNVHHDVTKDARHIGIVVAGLGNIGQCFIELLPQQLSRVSALENVHLVGLVSSKKILFQSDGIEAECATQAFEEHAVDYSEEALLEWLSNHPYDELIVVDITPSESFSQLYSQFFANGIHVIGANKWAASAPLNEYQRNLTLAEKHQVLWLGNTTVGAGLPINHALEDLQQSGDNIVEISGIFSGTLSWLFEKYDGSSPFSELMSQALSDGITEPDPREDLSGRDVQRKLLILARLAGFELSLEDIACENLVPESLAALPLNEFLSRAEELNAPFKERLAAAKKMSSCIRYVARFKTEGGEVQAKVSLETLPQSDAFAALTPCDNVFKVVSNWYQENAL

Annotated regions:
phrase: IHKFGGSS
type: CONSERVED_SITE
name: Aspartate_kinase_CS
description: Aspartate kinase, conserved site

phrase: GLGNIGQCFIELLPQQLSRVSALENVHLVGLVSSKKILFQSDGIEAECATQAFEEHAVDYSEEALLEWLSNHPYDELIVVDITPSESFSQLYSQFFANGIHVIGANKWAASAPLNEYQRNLTLAEKHQV
type: DOMAIN
name: Asp/hSer_DH_NAD-bd
description: Aspartate/homoserine dehydrogenase, NAD-binding

phrase: ALSDGITEPDPREDLSGRDVQR
type: CONSERVED_SITE
name: HDH_CS
description: Homoserine dehydrogenase, conserved site

phrase: QIHKFGGSSLASIECVNRVVEIIQHNCQLHDIVVVSANGDITDDLIEIYQFALQNSEQLHQSIEQLKQKQRDLVFGLLNESNAEALFAELLCDFELLAKWLQIDISEHEAELLAFGECWSARLLAAILAERVCPSFAIDSREFLVINNDVDCQVDYDVSQNHLSQLLDVQKLAVITGYIAKNTLGLPCTLGRNGSDYSATIIAALTNAQNVTLWTDVDGIYSADPRVVPLSRKLHRVPRSVAKELGRLGNPVLHAKTLQPLERVGSHLHVA
type: DOMAIN
name: Asp/Glu/Uridylate_kinase
description: Aspartate/glutamate/uridylate kinase

phrase: PINHALEDLQQSGDNIVEISGIFSGTLSWLFEKYDGSSPFSELMSQALSDGITEPDPREDLSGRDVQRKLLILARLAGFELSLEDIACENLVPESLAALPLNEFLSRAEELNAPFKERLAAAKKMSSCIRYVARFKTEGGEVQAKVSLETLPQSDAFAALTPCDNVFKVVSNWYQ
type: DOMAIN
name: HDH_cat
description: Homoserine dehydrogenase, catalytic

phrase: AVQIHKFGGSSLASIECVNRVVEIIQHNCQLHDIVVVSANGDITDDLIEIYQFALQNSEQLHQSIEQLKQKQRDLVFGLLNESNAEALFAELLCDFELLAKWLQIDISEHEAELLAFGECWSARLLAAILAERVCPSFAIDSREFLVINNDVDCQVDYDVSQNHLSQLLDVQKLAVITGYIAKNTLGLPCTLGRNGSDYSATIIAALTNAQNVTLWTDVDGIYSADPRVVPLSRKLHRVPRSVAKELGRLGNPVLHAKTLQPLERVGSHLHVASSFDPDMPGTEVGDFGQIAKQELSVTYANDLLLVQSESFVGESGQLAFHKFSAISGDLDDGQLVIHLSQQKAVSEWLASDDTEVKFTPVSVMAIVGHNVARRGNVKARFKRALKHHQPIAFFNQLHSDSLVSVLPQPCTGELLNNVHHDVTKDARHIGIVVAGLGNIGQCFIELLPQQLSRVSALENVHLVGLVSSKKILFQSDGIEAECATQAFEEHAVDYSEEALLEWLSNHPYDELIVVDITPSESFSQLYSQFFANGIHVIGANKWAASAPLNEYQRNLTLAEKHQVLWLGNTTVGAGLPINHALEDLQQSGDNIVEISGIFSGTLSWLFEKYDGSSPFSELMSQALSDGITEPDPREDLSGRDVQRKLLILARLAGFELSLEDIACENLVPESLAALPLNEFLSRAEELNAPFKERLAAAKKMSSCIRYVARFKTEGGEVQAKVSLETLPQSDAFAALTPCDNVFKVVSNWYQEN
type: DOMAIN
name: Bifunc_Aspkin/hSer_DH
description: Bifunctional aspartokinase/homoserine dehydrogenase, homoserine dehydrogenase domain
Protein sequence:
MKYIVVTGGVMSGLGKGITIASIGRNLKNKGYKVTAIKIDPYINIDAGTMSPYQHGEVFVLRDGGEVDLDLGNYERFLDTELTRDHNITTGKVYQEVIAKERRGDYLGKTVQIIPHITNEIKNKIRKVAARSGADVCLIEIGGTVGDIESMPFLEAVRQMHREEPSENIVFIHVTLVMEDLQGEQKTKPTQHSVKELRALGLSPEVIVTRSKTPLQESAKEKIALFCDVPQELVISAHDAGDIYEVPLEIEEQGLTTQLMKHLRLESGVDDGGWREMVARMKSTTDEVKLAIVGKYTNLEDSYLSILEAVKHGGIDNACRVEVNMVEAETLEEDLVEVEKLKQYDGILIPGGFGGRGTEGKMLAIKFARENDIPFLGICLGMQLAVIEFARNVANLENANSTEFDEDTPYPVIDILPEQTGVADMGGTMRLGDYDAILKEGSFATKLYGTNYIVERHRHRYEVNPEFVDRLESFGIVFSGKNKNRMEIAEIPGKRFFFASQFHPEFKSRPGRPSPPFKGLVRAMCKYRKEREVQ

Annotated regions:
phrase: EDSYLSILEAVKHGGIDNACRVEVNMVEAETLEEDLVEVEKLKQYDGILIPGGFGGRGTEGKMLAIKFARENDIPFLGICLGMQLAVIEFARNVANLENANSTEFDEDTPYPVIDILPEQTGVADMGGTMRLGDYDAILKEGSFATKLYGTNYIVERHRHRYEVNPEFVDRLESFGIVFSGKNKNRMEIAEIPGKRFFFASQFHPEFKSRPGRPSPPFKGLV
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: VKLAIVGKYTNLEDSYLSILEAVKHGGIDNACRVEVNMVEAETLEEDLVEVEKLKQYDGILIPGGFGGRGTEGKMLAIKFARENDIPFLGICLGMQLAVIEFARNVANLENANSTEFDEDTPYPVIDILPEQTGVADMGGTMRLGDYDAILKEGSFATKLYGTNYIVERHRHRYEVNPEFVDRLESFGIVFSGKNKNRMEIAEIPGKRFFFASQFHPEFKSRPGRPSPPFKGL
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain

phrase: KYIVVTGGVMSGLGKGITIASIGRNLKNKGYKVTAIKIDPYINIDAGTMSPYQHGEVFVLRDGGEVDLDLGNYERFLDTELTRDHNITTGKVYQEVIAKERRGDYLGKTVQIIPHITNEIKNKIRKVAARSGADVCLIEIGGTVGDIESMPFLEAVRQMHREEPSENIVFIHVTLVMEDLQGEQKTKPTQHSVKELRALGLSPEVIVTRSKTPLQESAKEKIALFCDVPQELVISAHDAGDIYEVPLEIEEQGLTTQLM
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: KYIVVTGGVMSGLGKGITIASIGRNLKNKGYKVTAIKIDPYINIDAGTMSPYQHGEVFVLRDGGEVDLDLGNYERFLDTELTRDHNITTGKVYQEVIAKERRGDYLGKTVQIIPHITNEIKNKIRKVAARSGADVCLIEIGGTVGDIESMPFLEAVRQMHREEPSENIVFIHVTLVMEDLQGEQKTKPTQHSVKELRALGLSPEVIVTRSKTPLQESAKEKIALFCDVPQELVISAHDAGDIYEVPLEIEEQGLTTQLMKHLR
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal
Protein sequence:
MTDLYTDDHALALDDADPLRALRDEFMIPRHEGREQAYFCGNSLGLQPKAARGHVLDVLDKWAAEAVEAHFTGTTQWMPYHALVRDGLARVVGAESGEVVAMNSLTANLHLMLVSFYRPTRERAAILMEAGAFPSDRYALESQLRFHGFDPARDLIELAPDEPEGRFSMAAIERAIAEHGPRLALVLWPGVQYRSGQAFDLAAITRLGHAAGAVVGFDLAHAAGNLPLQLHDSGADFAVWCHYKYLNAGPGAVAGCFVHARHANTDRPRFAGWWGHEEASRFRMAPEFKPTPGADGWQLSNPPILGLAPLRGSLELFDRAGMEALRAKSEALTGYLEALIDAQLADTLCIATPREPERRGAQLSLRVLQGRGMQGRDAGRSLFGHLSANGVVGDWREPDVIRVSPAPMYNTHADVLRFVREVVEWREATA

Annotated regions:
Protein sequence:
MLNKRVIPCLDVNNGRVVKGTSFVNLRDAGDPVELAARYYREGADELVFLDISATTEERKTMAEVVEKVSKEVFIPLCVGGGLRSIADMTTLLRAGADKVSVNSAAVSDPDLISRGAEKFGRQCIVVAIDAKREGNSWQVYTHSGKKPTGLDAVEWAMKAEQLGAGEILLTSIDADGKNTGYDNELNREVGSRLNIPVIASGGAGSPEDLYNALDKGQADAVLAASIFHYGRYSIAEVKKYLKSKGLPVRLEN

Annotated regions:
Protein sequence:
MRSQYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGIVQVVYDPDLPEVFDVASTLRSEFCVQVTGLVRARPDSQVNQDMRTGGIEILGKGLTILNSSAPLPINMDKNQHNTEEQRLKYRYLDLRRPEMADRIVFRSKVTSAVRRFLDDSGFLDIETPILTKATPEGARDYLVPSRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMSSEQVMAKTEEMVRGLFNDLLNVDLGEFPKMTFAEAMRRFGSDKPDLRNPLELIDIADIVKEVEFAVFNGPANDPEGRVAVLSIPGGAKLSRKQLDEYAKYVTIYGAKGLAWMKVNDLDQGMEGIQSPVLKFLSEDVVKALLDRTGAQTGDLILFGADKANIVAEAMGALRLKAGEDFDLLQGEWKPLWVVDFPMFERTSDGGLHAMHHPFTAPTGISPEQLEADPTAAISDAYDMVLNGCELGGGSVRIHNSEMQSAVFRILGIEEEEANEKFGFLLEALRYGTPPHAGLAFGLDRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPAQLIELGIEVIENQESKEEQA

Annotated regions:
phrase: VTLVGWVNRSRDLGGVVFLDLRDREGIVQVVYDPDLPEVFDVASTLRSEFCVQVTGLVRARPD
type: DOMAIN
name: NA-bd_OB_tRNA
description: OB-fold nucleic acid binding domain, AA-tRNA synthetase-type

phrase: RSKVTSAVRRFLDDSGFLDIETPILTKATPEGARDYLVPSRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMSSEQVMAKTEEMVRGLFNDLLNVDLGEFPKMTFAEAMRRFGSDKPDLRNPLELIDIADIVKEVEFAVFNGPANDPEGRVAVLSIPGGAKLSRKQLDEYAKYVTIYGAKGLAWMKVNDLDQGMEGIQSPVLKFLSEDVVKALLDRTGAQTGDLILFGADKANIVAEAMGALRLKAGEDFDLLQGEWKPLWVVDFPMFERTSDGGLHAMHHPFTAPTGISPEQLEADPTAAISDAYDMVLNGCELGGGSVRIHNSEMQSAVFRILGIEEEEANEKFGFLLEALRYGTPPHAGLAFGLDRIIMLMTGASSIRDVMAF
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: RSQYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGIVQVVYDPDLPEVFDVASTLRSEFCVQVTGLVRARPDSQVNQDMRTGGIEILGKGLTILNSSAPLPINMDKNQHNTEEQRLKYRYLDLRRPE
type: DOMAIN
name: Asp-tRNA-ligase_1_N
description: Aspartate-tRNA ligase, type 1, anticodon recognition domain

phrase: IVFRSKVTSAVRRFLDDSGFLDIETPILTKATPEGARDYLVPSRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMSSEQVMAKTEEMVRGLFNDLLNVDLGEFPKMTFAEAMRRFGSDKPDLRNPLELIDIADIVKEVEFAVFNGPANDPEGRVAVLSIPGGAKLSRKQLDEYAKYVTIYGAKGLAWMKVNDLDQGMEGIQSPVLKFLSEDVVKALLDRTGAQTGDLILFGADKANIVAEAMGALRLKAGEDFDLLQGEWKPLWVVDFPMFERTSDGGLHAMHHPFTAPTGISPEQLEADPTAAISDAYDMVLNGCELGGGSVRIHNSEMQSAVFRILGIEEEEANEKFGFLLEALRYGTPPHAGLAFGLDRIIMLMTGASSIRDVMAFPKT
type: DOMAIN
name: AspRS_core
description: Aspartate-tRNA ligase, type 1, core domain

phrase: EEQRLKYRYLDLRRPEMADRIVFRSKVTSAVRRFLDDSGFLDIETPILTKATPEGARDYLVPSRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMSSEQVMAKTEEMVRGLFNDLLNVDLGEFPKMTFAEAMRRFGSDKPDLRNPLELIDIADIVKEVEFAVFNGPANDPEGRVAVLSIPGGAKLSRKQLDEYAKYVTIYGAKGLAWMKVNDLDQGMEGIQSPVLKFLSEDVVKALLDRTGAQTGDLILFGADKANIVAEAMGALRLKAGEDFDLLQGEWKPLWVVDFPMFERTSDGGLHAMHHPFTAPTGISPEQLEADPTAAISDAYDMVLNGCELGGGSVRIHNSEMQSAVFRILGIEEEEANEKFGFLLEALRYGTPPHAGLAFGLDRIIMLMTGASSIRDVMAFPK
type: DOMAIN
name: Aa-tRNA-synt_II
description: Aminoacyl-tRNA synthetase, class II (D/K/N)

phrase: FNGPANDPEGRVAVLSIPGGAKLSRKQLDEYAKYVTIYGAKGLAWMKVNDLDQGMEGIQSPVLKFLSEDVVKALLDRTGAQTGDLILFGADKANIVAEA
type: DOMAIN
name: GAD_dom
description: GAD domain