nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MIDPNLLRNNLAEVAEKLKVKRNFMLDTEKLTALEDQRKNLQVTTENLQAERNARSKAIGAAKVRGEDIAPLLAEMDDMGNQLTEAKAQLDAVLAEINQIALSIPNLPADEVPLGKDDTENKEILRWGTPHTFDFEVKDHITLGEEANGLDFAAGAKLAGARFAVMKGQIAKMHRALAQFMLDLHTEQHGYLETYVPYLVNHATLYGTGQLPKFGEDLFHTLALEGEQPYALIPTAEVPVTNLVRDVIIDEAELPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVDPDKSMEALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSCKTYDLEVWLPAQNTYREISSCSNMWDFQARRMQARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSITVPEELRPYMGGLDVIGK

Annotated regions:
phrase: MIDPNLLRNNLAEVAEKLKVKRNFMLDTEKLTALEDQRKNLQVTTENLQAERNARSKAIGAAKVRGEDIAPLLAEMDDMGNQLTEAKAQLDAVLAEINQIALSIPNL
type: DOMAIN
name: Ser-tRNA-synth_1_N
description: Serine-tRNA synthetase, type1, N-terminal

phrase: ENKEILRWGTPHTFDFEVKDHITLGEEANGLDFAAGAKLAGARFAVMKGQIAKMHRALAQFMLDLHTEQHGYLETYVPYLVNHATLYGTGQLPKFGEDLFHTLALEGEQPYALIPTAEVPVTNLVRDVIIDEAELPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVDPDKSMEALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSCKTYDLEVWLPAQNTYREISSCSNMWDFQARRMQARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSITVPEELRPY
type: DOMAIN
name: SerRS_core
description: Serine-tRNA ligase catalytic core domain

phrase: EGEQPYALIPTAEVPVTNLVRDVIIDEAELPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVDPDKSMEALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSCKTYDLEVWLPAQNTYREISSCSNMWDFQARRMQARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLEN
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: KMHRALAQFMLDLHTEQHGYLETYVPYLVNHATLYGTGQLPKFGEDLFHTLALEGEQPYALIPTAEVPVTNLVRDVIIDEAELPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVDPDKSMEALEELTGHAEKVLQLLNLPYRKVLLCTGDMGFGSCKTYDLEVWLPAQNTYREISSCSNMWDFQARRMQARCKAKGDKKTRLVHTLNGSGLAVGRTLVAVLENYQNADGSITV
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II
Protein sequence:
MRPSGRAPHELRPIHFTRHYTRYAEGSVLVEFGNTRVICNASVEDRIPRFLKGTGRGWITAEYGMLPRSTHNRMGREAAQGRQGGRTLEIQRFIGRALRAVVDLAALGEVTVTLDCDVIQADGGTRTAAITGSYVALVDAINNRLKKRIITHSPIHGQLASISVGIYEGTPVLDLDYREDSTAETDMNVVMNEAGAFIEIQGTAEGHAFRMNELQAMLDLAKSGINTLLAQQTEVLAKN

Annotated regions:
phrase: ELRPIHFTRHYTRYAEGSVLVEFGNTRVICNASVEDRIPRFLKGTGRGWITAEYGMLPRSTHNRMGREAAQGRQGGRTLEIQRFIGRALRAVVDLAALGEVTVTLDCDVIQADGGTRTAAITGSYVALVD
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1

phrase: CDVIQADGGTRTA
type: CONSERVED_SITE
name: RNase_PH_CS
description: Ribonuclease PH, conserved site

phrase: ASISVGIYEGTPVLDLDYREDSTAETDMNVVMNEAGAFIEIQGTAEGHAFRMNELQAMLDLAKS
type: DOMAIN
name: ExoRNase_PH_dom2
description: Exoribonuclease, phosphorolytic domain 2
Protein sequence:
MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGVLPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRKVLLRKNGNKGAGGHSYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGGAYTRYVDNNFCGPDGYPLECIKDLLARAGKASCTLSEQLDFIDTKRGVYCCREHEHEIAWYTERSEKSYELQTPFEIKLAKKFDTFNGECPNFVFPLNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNECNQMCLSTLMKCDHCGETSWQTGDFVKATCEFCGTENLTKEGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYWVPRASANIGCNHTGVVGEGSEGLNDNLLEILQKEKVNINIVGDFKLNEEIAIILASFSASTSAFVETVKGLDYKAFKQIVESCGNFKVTKGKAKKGAWNIGEQKSILSPLYAFASEAARVVRSIFSRTLETAQNSVRVLQKAAITILDGISQYSLRLIDAMMFTSDLATNNLVVMAYITGGVVQLTSQWLTNIFGTVYEKLKPVLDWLEEKFKEGVEFLRDGWEIVKFISTCACEIVGGQIVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKTGDLQPLEQ

Annotated regions:
phrase: TRYVDNNFCGPDGYPLECIKDLLARAGKASCTLSEQLDFIDTKRGVYCCREHEHEIAWYTERSEKSYELQTPFEIKLAKKFDTFNGECPNFVFPLNSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNECNQMCLSTLMKCDHCGETSWQTGDFVKATCEFCGTENLTKEGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAYWVPRASANIGCNHTGVVGEGSEGLNDNLLEILQ
type: DOMAIN
name: NSP2_N_CoV
description: Nonstructural protein 2, N-terminal domain, coronavirus

phrase: THVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGVLPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRKVLLRKN
type: DOMAIN
name: a/bCoV_NSP1_glob
description: NSP1, globular domain, alpha/betacoronavirus

phrase: NEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGTCGLVEVEKGVLPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRKVLLRKNGNKG
type: DOMAIN
name: NSP1_glob_bCoV
description: NSP1, globular domain, betacoronavirus

phrase: ELGTDPYEDFQENWNTKHSSGVTRELMRELN
type: DOMAIN
name: bCoV_NSP1_C
description: NSP1, C-terminal domain, betacoronavirus

phrase: KVNINIVGDFKLNEEIAIILASFSASTSAFVETVKGLDYKAFKQIVESCGNFKVTKGKAKKGAWNIGEQKSILSPLYAFASEAARVVRSIFSRTLETAQNSVRVLQKAAITILDGISQYSLRLIDAMMFTSDLATNNLVVMAYITGGVVQLTSQWLTNIFGTVYEKLKPVLDWLEEKFKEGVEFLRDGWEIVKFISTCACEIVGGQIVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKTGDLQPLE
type: DOMAIN
name: CoV_NSP2_M
description: Non-structural protein 2, middle domain, coronavirus
Protein sequence:
MDPNRIIQALKGTIDPNLRLAAENELNQSYKIINFAPTLLQIIVSEQVEFPVRQAAAIYLKNMVSQYWQDREPTLGEVVFPFNIHENDRGQIRENMVEAIIRCPESIRAQLTVCLRAIIKHDFPGRWTGVVDKINLYLQSQNSGSWYGSLLALYQLVKNYEFKKAEERDPLLAAMQIFLPRLQQLITQLLSDATFISVLIQKQILKIFHALVQLINNTVMTHWMEILRTVVDRDVPAIWFSECLRGGFQETLEADEDDRPELIWWKCKKWALHILTRIFERYGSPGNVTKEYVEFADFFLKTYALGIQQVLLKVMEQHRQRQYVSPRVLQQTLSFMTQGVSHSLTWRQMKPHMQTITHELVFPLMCYKDEDERLWQEDPYEYIRMKFNVYDDHVSPATAAQTLLCTAARKRKEVLPQMMEFCHQILVDPSADPRRTDGALHVIGTLAQPLLKKRVYRDQMELMLQNYVFPLLNSNLAYLRARSCWVLHSFSPLKFHNELVLRNAVELVKHNLVEDKEMPVKVEAAIALQTLVRNQEQAKVYIRPFIRPVMQELLHIIKETENDDLTGVIQKMICEYSEEVTVIAVDMTQNLAEIFSKILQSEEYEESEDKTVMALGILSTIDTILTVMGDRKEISQQLEGICLQVIGLVLQKPIIGMAEFYEEILSLAFGLTCYCISPQMWQLLGVLYDVFQHDCFDYFTDMMPLLHNYVTVDTNMLLSDPKYLEVIYTMCKKVLTSDAGEDPECHAAKLLEVIILQCRGRGIDQCIPLFVEAVLERLTRGVKSSELRTMCLQVVIAALYYNPTLLIHTLENIRFPHSPEPITAQFINQWMNDTEFFLGLHDRKMCVIGLSILMELPSRPAVLEEVVGQIVPSVLLLFLGLKHIYASRVLNKPEQFGRAQGSEEEENEEIPSDEDEVGEKGVALQPSVAPTGNDNEDDDDEDDDEYWDDEGLEGTPLEEYSTPLDCDNGEDEYQFFTASLLRVQSSDAGWYQSLTSPLNEDQRKQLQEIYNLAQQRRSTGVKGL

Annotated regions:
phrase: AENELNQSYKIINFAPTLLQIIVSEQVEFPVRQAAAIYLKNMVSQYWQDREPTLGEVVFPFNIHENDRGQIRENMVEAII
type: DOMAIN
name: Importin-beta_N
description: Importin-beta, N-terminal domain

phrase: AENELNQSYKIINFAPTLLQIIVSEQVEFPVRQAAAIYLKNMVSQYWQDREPTLGEVVFPFNIHENDRGQIRENMVEAI
type: DOMAIN
name: Importin-beta_N
description: Importin-beta, N-terminal domain

phrase: AENELNQSYKIINFAPTLLQIIVSEQVEFPVRQAAAIYLKNMVSQYWQDREPTLGEVVFPFNIHENDRGQIRENMVEAII
type: DOMAIN
name: Importin-beta_N
description: Importin-beta, N-terminal domain
Protein sequence:
MLTKRIIPCIDVDLDEDGNPAVYTGINFEDLEYTGDPVEMAKQYNMAGADEFVFLDITASAVGRETMLETVSRVADEIFIPLTVGGGIRTRDDIKSTLRAGADKVSINTAALETPELITTGASAFGSQCIVISVDARRRFDEQGENYLSVDGESCWFECTVKGGREGTGIDVLEWVTEAETRGAGELFINSIDADGTQDGYDIPLTSAVCDAVSTPVIASSGCGSPADMHEVFTEAGADAGLAASIFHFGEYSIEATKEYLDERGVPIRT

Annotated regions:
Protein sequence:
MRVRGMQRNYQHLGKWGLLFLGILIICNATEKSWVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWASHACVPTDPNPQEVNLENVTENFDMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLHCTNANATNGTANGLHNSTLTEEPGAIQNCSFNITSEVRDKQLKANALFYKLDIVPISNGGNGSGTNRLISCNTSTITQACPKVSWDPIPIHYCAPAGYAILKCNDKKFNGTGPCKNVSTVQCTHGIKPVVSTQLLLNGSLAEENIIIRSQNISDNAKTIIVHLNESVQINCTRPNNNTRKSIHLGPGRAFYTTGRIIGDIRKAHCNVSGTQWNKTIERVRAALRPHFPNKTIKFNSSTGGDLEITMHSFNCRGEFFYCNTSRLFNDTKFNDTIVLPCRIRQLVRLWQEVGRAMYAVPIAGSITCNSTITGLLLTRDGGQHNETNKTEIFRPGGGNMKDNWRSELYKYKVVEIEPLGVAPTGARRQVVKREKRAVVGIGAVLIGFLGAAGSTMGAASVTLTVQARQLLSGIVQQQNNLLKAIDAQQHMLQLTVWGIKQLQARVLAVERYLKDQQLLGLWGCSGKLICTTNVPWNSSWSNKTQTEIWGNMTWMEWEKEISNYSKEIYKLIEESQNQQEKNEQELLALDKWASLWNWFDITNWLWYIKIFIMIVGGLIGLRIVFAVISIVNRVRKGYSPLSLQTHIPSPREPDRPDGIEEGGGEQDKDRSVRLVNGFLSLVWDDLRNLCLFSYRHLRDFILI

Annotated regions:
phrase: VQARQLLSGIVQQQNNLLKAIDAQQHMLQLTVWGIKQLQARVLAVERYLKDQQLLGLWGCSGKLICTTNVPWNSSWSNKTQTEIWGNMTWMEWEKEISNYSKEIYKLIEESQNQQEKNEQELLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASVTLTVQARQLLSGIVQQQNNLLKAIDAQQHMLQLTVWGIKQLQARVLAVERYLKDQQLLGLWGCSGKLICTTNVPWNSSWSNKTQTEIWGNMTWMEWEKEISNYSKEIYKLIEESQNQQEKNEQELLALDKWASLWNWFDITNWLWYIKIFIMIVGGLIGLRIVFAVISIVNRVRKGYSPLSL
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: WVTVYYGVPVWKEATTTLFCASDAKAYDTEVHNVWASHACVPTDPNPQEVNLENVTENFDMWKNNMVEQMHTDIISLWDQSLKPCVKLTPLCVTLHCTNANATNGTANGLHNSTLTEEPGAIQNCSFNITSEVRDKQLKANALFYKLDIVPISNGGNGSGTNRLISCNTSTITQACPKVSWDPIPIHYCAPAGYAILKCNDKKFNGTGPCKNVSTVQCTHGIKPVVSTQLLLNGSLAEENIIIRSQNISDNAKTIIVHLNESVQINCTRPNNNTRKSIHLGPGRAFYTTGRIIGDIRKAHCNVSGTQWNKTIERVRAALRPHFPNKTIKFNSSTGGDLEITMHSFNCRGEFFYCNTSRLFNDTKFNDTIVLPCRIRQLVRLWQEVGRAMYAVPIAGSITCNSTITGLLLTRDGGQHNETNKTEIFRPGGGNMKDNWRSELYKYKVVEIEPLGVAPTGARRQVVKREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MTKTAAALVVAAGRGTRLAGSDNALPKQYRPLAGRPVLSHTLDALGNHPRINRLVTVIHPDDVNHFSEAARAASTETASKIGPAVYGGATRQQSVLAGLKALALEGFDYVLIHDAARPFLPSAVIDRLLERLQAGNEGVLAALPVADTLKRADQSGRSLETVDRTGLWAAQTPQAFPLQRILRAHEKAVAAGKLDFTDDTGLAEWDGMTIVLTEGDPAAFKITTAADLRRAEQQAELQLMSTTPASPLPLSELADVRTGIGYDVHAFEDGDAVILGGVAIPHSSKLKGHSDADVVLHAITDATLGAIGDGDIGQHFPPSDPQWKGASSDQFQLDAMRRLSERGGRLAHVDVTIVCEEPKIGPHREAIRSSIAKICAVPVSRISVKATTSERLGFTGRKEGIAALASVTVRLPFQDED

Annotated regions:
phrase: RTGIGYDVHAFEDGDAVILGGVAIPHSSKLKGHSDADVVLHAITDATLGAIGDGDIGQHFPPSDPQWKGASSDQFQLDAMRRLSERGGRLAHVDVTIVCEEPKIGPHREAIRSSIAKICAVPVSRISVKATTSERLGFTGRKEGIAALASVT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: SDADVVLHAITDATL
type: CONSERVED_SITE
name: MECDP_synthase_CS
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site

phrase: LRRAEQQAELQLMSTTPASPLPLSELADVRTGIGYDVHAFEDGDAVILGGVAIPHSSKLKGHSDADVVLHAITDATLGAIGDGDIGQHFPPSDPQWKGASSDQFQLDAMRRLSERGGRLAHVDVTIVCEEPKIGPHREAIRSSIAKICAVPVSRISVKATTSERLGFTGRKEGIAALASVT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RTGIGYDVHAFEDGDAVILGGVAIPHSSKLKGHSDADVVLHAITDATLGAIGDGDIGQHFPPSDPQWKGASSDQFQLDAMRRLSERGGRLAHVDVTIVCEEPKIGPHREAIRSSIAKICAVPVSRISVKATTSERLGFTGRKEGIAALASVT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: VRTGIGYDVHAFEDGDAVILGGVAIPHSSKLKGHSDADVVLHAITDATLGAIGDGDIGQHFPPSDPQWKGASSDQFQLDAMRRLSERGGRLAHVDVTIVCEEPKIGPHREAIRSSIAKICAVPVSRISVKATTSERLGFTGRKEGIAALASVTVR
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: VLIHDAA
type: CONSERVED_SITE
name: ISPD_synthase_CS
description: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site

phrase: RTGIGYDVHAFEDGDAVILGGVAIPHSSKLKGHSDADVVLHAITDATLGAIGDGDIGQHFPPSDPQWKGASSDQFQLDAMRRLSERGGRLAHVDVTIVCEEPKIGPHREAIRSSIAKICAVPVSRISVKATTSERLGFTGRKEGIAALASVT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Protein sequence:
MNKPKKVAILTAGGLAPCLSSAIGSLIERYTEIDPSIEIICYRSGYKGLLLGDSYAVTPKIRENAALLHKFGGSPIGNSRVKLTNVKDCIKRGLVQEGQDPQKVAADQLVKDGVDVLHTIGGDDTNTAAADLAAFLAKNDYGLTVIGLPKTIDNDVFPIKQSLGAWTAAEQGAQYFQNVVAEYNANPRMLIVHEVMGRNCGWLTAATAMEYRKLLDRSEWLPEIGLDRAAYEVHGVFVPEMEIDLAAEAKRLREVMDKVDCVNIFVSEGAGVDAIVAEMQAKGQEVPRDAFGHIKLDAVNPGKWFGEQFAEMIGAEKTLIQKSGYFARASASNVDDIRLIKSCADLAVECAFRRESGVIGHDEDNGNVLRAIEFPRIKGGKPFDIDTPWFVQMLAGIGQSKGARVEVSH

Annotated regions:
phrase: KVAILTAGGLAPCLSSAIGSLIERYTEIDPSIEIICYRSGYKGLLLGDSYAVTPKIRENAALLHKFGGSPIGNSRVKLTNVKDCIKRGLVQEGQDPQKVAADQLVKDGVDVLHTIGGDDTNTAAADLAAFLAKNDYGLTVIGLPKTIDNDVFPIKQSLGAWTAAEQGAQYFQNVVAEYNANPRMLIVHEVMGRNCGWLTAATAMEYRKLLDRSEWLPEIGLDRAAYEVHGVFVPEMEIDLAAEAKRLREVMDKVDCVNIFVSEGAGVDAIVAEMQAKGQEVPRDAFGHI
type: DOMAIN
name: Phosphofructokinase_dom
description: Phosphofructokinase domain
Protein sequence:
MRYDPSLIEKKWQEFWKEHKSFEADEASDKPKYYVLDMFPYPSGAGLHVGHLIGYTATDIVARYKRAKGYAVLHPMGWDSFGLPAEQYAVRTGTHPRETTQKNIENFRKQLSAMGFSYDEGREFATSDPDYYRWTQKLFLFLYEKGLAYMADMAVNYCPELGTVLSNEEVENGLSVEGGYPVERRMLRQWILRITAYSDQLLEGLEDLDWPENVKQLQRNWIGKSEGALVRFEVNNERFLEVFTTRPDTIGGVSFLVVAPEHPEVNRLISENQREAVESYIRAAQSKSERDRISETKVKTGVFTGTYAKHPVTGADIPIWISDYVILGYGSGVVMGVPAHDERDREFAEAFSLPIYEVLDKDECCIHSNHGDFLLDGLAGQEARDYVIAYLQKKNLGEAKVAYKLRDWLFSRQRYWGEPIPIIHFEDGTCRPLEDDELPLLPPEIQDYRPEGFGQGPLAKVKEWVDIHDTKTNRRGRRETHTMPQWAGSCWYYLRFCDAHNSQAPWSNENERYWMPVDLYIGGAEHAVLHLLYSRFWHRVFYEAGMVSTAEPFKKLINQGLVLATSYRIPGKGYVYPEDAREDNGVWMSASGEELEVRQEKMSKSKLNGVDPQILIDEFGADALRMYAMFSGPLDKNKLWSNQGVSGCRRFLNRFYEMATSASVQDVDDPKGMALAHRLVHRVGEDIEKMSLNTIPSSFMEFINEFVKLDIYPRSALAMVVQALAPIAPHISEELWTVLGYAPGIDAAGWPKVDPKYLEDTSVTFVIQVNGKLRARLDMDKATSKEDVLSLAREAVAKYLEGKEVKKEVFVPNRLVNFVL

Annotated regions:
phrase: RNWIGKSEGALVRFEVNNERFLEVFTTRPDTIGGVSFLVVAPEHPEVNRLISENQREAVESYIRAAQSKSERDRISETKVKTGVFTGTYAKHPVTGADIPIWISDYVILGYGSGVVMGVPAHDERDREFAEAFSLPIYEVLDK
type: DOMAIN
name: Leu_tRNA-synth_edit
description: Leucyl-tRNA synthetase, editing domain

phrase: AHRLVHRVGEDIEKMSLNTIPSSFMEFINEFVKLDIYPRSALAMVVQALAPIAPHISEELWTVLGYAPGIDAAGWPKVDPKYLEDTSVTFVIQVNGKLRARLDMDKATSK
type: DOMAIN
name: M/V/L/I-tRNA-synth_anticd-bd
description: Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding

phrase: EKMSKSKLNGVDPQILIDEFGADALRMYAMF
type: DOMAIN
name: aa-tRNA-synth_Ia
description: Aminoacyl-tRNA synthetase, class Ia

phrase: MFPYPSGAGLHVGHLIGYTATDIVARYKRAKGYAVLHPMGWDSFGLPAEQYAVRTGTHPRETTQKNIENFRKQLSAMGFSYDEGREFATSDPDYYRWTQKLFLFLYEKGLAYMADMAVNYCPELGTVLSNEEV
type: DOMAIN
name: Methionyl/Leucyl_tRNA_Synth
description: Methionyl/Leucyl tRNA synthetase

phrase: PSGAGLHVGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site
Protein sequence:
MRVEGKPYTTIWTGEDGASIKIIDQTRLPHRFEIIAISDVEAAARAIAEMWVRGAPLIGVTAAYGLALAMRADPSDANLERASAHLKATRPTAVNLQWAVDRVRRLIESAPPPQRFAAAFAEAGVIARDDIALCEAIGMHGLSLIKTIAAGKPPGAPVNVLTHCNAGWLATVDWGTATAPVYKAHDAGLAVHVYVDETRPRNQGAALTAFELGQHGVPHTVIVDNAGGHLMQHGGIDMVIVGTDRTTASGDVCNKIGTYLKALAARDNNIPFYVAAPSPSIDFSIADGVREVPIEIRSEAEVTHISGLSADGEITRVRLTPEGSRALNPAFDVTPARLVTGLITERGVIKANASALAAAFRERVAG

Annotated regions:
Protein sequence:
MSADSKVQLTALLRAALKSIAPELADTPIHLERPKQAGHGDFATNLALQLAKPLRRRPRELAELLLAELPRSTLVAATEVAGAGFINFTLAAGAKTAAVGTVLERGAEFGRGARNGTSVQLEFVSANPTGPLHVGHGRGAAYGASLAAVLDFAGSDVTREYYINDAGRQMDILALSTWLRYLALYGLDIPFPPNAYQGDYVVDMARAMREGHQDRFAGFTIEQVLEGAPGLPVAERKDDEAKTQREDHLDMLIANAKRLLGEDYHFVHGFALNEQLGDGRDDLEEFGVHFDKWFSEKSLFDTGLVDRAVAELEKRGHVYLQDGAKWFRSTAFGDEKDRVVQRENGLYTYFASDIAYHLNKYERGYDRIIDIWGADHHGYIPRVKGAIAALGLPPEKLEVALVQFAVLYRNGQKASMSTRSGEFVTLRELRREVGNDACRFFYVLRKSDQHLDFDLDLAKSQSNENPVYYVQYAHARVCSVLEQWGGEAAELRAAQLDLLGNERELALCARLGGFPELIQNAAADHAPHQIAFYLKDLAAEFHSWYNAERMLVDDPALRLARLALATAVRQVLATALALLGVSAPQSM

Annotated regions:
phrase: VQLEFVSANPTGPLHVGHGRGAAYGASLAAVLDFAGSDVTREYYINDAGRQMDILALSTWLRYLALYGLDIPFPPNAYQGDYVVDMARAMREGHQDRFAGFTIEQVLEGAPGLPVAERKDDEAKTQREDHLDMLIANAKRLLGEDYHFVHGFALNEQLGDGRDDLEEFGVHFDKWFSEKSLFDTGLVDRAVAELEKRGHVYLQDGAKWFRSTAFGDEKDRVVQRENGLYTYFASDIAYHLNKYERGYDRIIDIWGADHHGYIPRVKGAIAALGLPPEKLEVALVQFAVLYRNGQKASMSTRS
type: DOMAIN
name: ArgRS_core
description: Arginyl-tRNA synthetase, catalytic core domain

phrase: LVDRAVAELEKRGHVYLQDGAKWFRSTAFGDEKDRVVQRENGLYTYFASDIAYHLNKYERGYDRIIDIWGADHHGYIPRVKGAIAALGLPPEKLEVALVQFAVLYRNGQKASMSTRSGEFVTLRELRREVG
type: DOMAIN
name: ArgRS_core
description: Arginyl-tRNA synthetase, catalytic core domain

phrase: TVLERGAEFGRGARNGTSVQLEFVSANPTGPLHVGHGRGAAYGASLAAVLDFAGSDVTREYYINDAGRQMDIL
type: DOMAIN
name: ArgRS_core
description: Arginyl-tRNA synthetase, catalytic core domain

phrase: VQYAHARVCSVLEQWGGEAAELRAAQLDLLGNERELALCARLGGFPELIQNAAADHAPHQIAFYLKDLAAEFHSWYNAERMLVDDPALRLARLALATAVRQVLATALALLGVSAPQS
type: DOMAIN
name: DALR_anticod-bd
description: DALR anticodon binding

phrase: PTGPLHVGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: VQYAHARVCSVLEQWGGEAAELRAAQLDLLGNERELALCARLGGFPELIQNAAADHAPHQIAFYLKDLAAEFHSWYNAERMLVDDPALRLARLALATAVRQVLATALALLGVSAPQS
type: DOMAIN
name: DALR_anticod-bd
description: DALR anticodon binding

phrase: LTALLRAALKSIAPELADTPIHLERPKQAGHGDFATNLALQLAKPLRRRPRELAELLLAELPRSTLVAATEVAGAGFINFT
type: DOMAIN
name: Arg-tRNA-synth_N
description: Arginyl tRNA synthetase N-terminal domain

phrase: VQLTALLRAALKSIAPELADTPIHLERPKQAGHGDFATNLALQLAKPLRRRPRELAELLLAELPRSTLVAATEVAGAGFINFT
type: DOMAIN
name: Arg-tRNA-synth_N
description: Arginyl tRNA synthetase N-terminal domain
Protein sequence:
MAAAAFEVPAALTTSESTMAAERAAAPVQAVEPTPASPWTQRTAHDIGGPRTRTGDVVLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDSLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPEVLANALTRYMRDPTFVRLNPSDPSLIGLKQYYQVVNSYPLAHKIFEEKTQHLQELFSKVPFNQALVFSNLHSRAQHLADILSSKGFPTECISGNMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENMMMKIAQKCNINLLPLPDPIPPGLMEECLNWDVEVKAAMHTYSSPTVATQSPKKQVQKLERAFQSQRTPGNQTPSPRNTSASALSARPKHSKPKLPVKSHSECGVLEKAAPPQESGCPAQLEEQVKNSVQTSVEDSSSNSQHQAKDSSPGSLPKIPCLSSFKVHQPSTLTFAELVDDYEHYIKEGLEKPVEIIRHYTGPEAQTGNPQNGFVRNRVSEDRAQMLVSSSQSGDSESDSDSCSSRTSSQSKGNKSYLEGSSDTQLKDTECTPVGGPLSLEQVQNGNDTPTQVEYQEAPETQVKARHKEGANQRSKQSRRNPARRSSYRVQSEPQEESWYDCHRETTASFS

Annotated regions:
phrase: GFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDSLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPEVLANALTRYMRDPTFVRLNPSDPSLIGLKQ
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: KTQHLQELFSKVPFNQALVFSNLHSRAQHLADILSSKGFPTECISGNMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRF
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: QHLADILSSKGFPTECISGNMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRF
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: ILDEADKL
type: CONSERVED_SITE
name: RNA-helicase_DEAD-box_CS
description: ATP-dependent RNA helicase DEAD-box, conserved site

phrase: IPLGRCGLDLIVQAKSGTGKTCVFSTIALDSLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPEVLANALTRYMRDPTF
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: HLQELFSKVPFNQALVFSNLHSRAQHLADILSSKGFPTECISGNMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCCRGEEENMMMKIAQKCNINLLPLPDPIPPGLMEE
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: SPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIALDSLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPEV
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: ADFESLLLSRPVLEGLRAAGFERPSPVQ
type: DOMAIN
name: RNA_helicase_DEAD_Q_motif
description: RNA helicase, DEAD-box type, Q motif
Protein sequence:
MAPDIATSPEKQKALNLVMTQIERSFGKGSIMRLGDATRMKVETVPTGALPLDLALGGGLPRGRVVEIYGPESSGKTTLALHAIAAVQQTGGIAAFVDAEHALDPAYAAVLGVDIQNLLISQPDTGETALEIVDQLVRSTAVDVVVIDSVAALVPKAEIEGDMGDAHVGLQARLMSQALRKITGNIGKTGCIVIFLNQLRQKIGVTYGNPETTTGGNALKFYASVRLDIRRVQTLKKGTEEFGNRVKVKVAKNKVAPPFRVAEFDIIFGKGISRLGCILDMAEETGVVNRKGAWYSYNGENLAQGRDNTIKYMEENPEFARNIEQLVRQKLEMGAVVSANSVAANETDAEEEYVEEE

Annotated regions:
phrase: GCILDMAEETGVVNRKGAWYSYNGENLAQGRDNTIKYMEENPEFARNIEQLVRQK
type: DOMAIN
name: RecA-like_C
description: RecA-like, C-terminal

phrase: GVTYGNPETTTGGNALKFYASVRLDIRRVQTLKKGTEEFGNRVKVKVAKNKVAPPFRVAEFDIIFGKGISRLG
type: DOMAIN
name: RecA_monomer-monomer_interface
description: DNA recombination and repair protein RecA, monomer-monomer interface

phrase: KVETVPTGALPLDLALGGGLPRGRVVEIYGPESSGKTTLALHAIAAVQQTGGIAAFVDAEHALDPAYAAVLGVDIQNLLISQPDTGETALEIVDQLVRSTAVDVVVIDSVAALVPKAEIEGDMGDAHVGLQARLMSQALRKITGNIGKTGCIVIFLNQ
type: DOMAIN
name: RecA_ATP-bd
description: DNA recombination and repair protein RecA-like, ATP-binding domain

phrase: ALKFYASV
type: CONSERVED_SITE
name: DNA_recomb/repair_RecA_CS
description: DNA recombination/repair protein RecA, conserved site

phrase: RGRVVEIYGPESSGKTTLALHAIAAVQQTGGIAAFVDAEHALDPAYAAVLGVDIQNLLISQPDTGETALEIVDQLVRSTAVDVVVIDSVAALVPKAEIEGDMGDAHVGLQARLMSQALRKITGNIGKTGCIVIFLNQLRQKIGVTYGNPETTTGGNALKFYASVRLDIRRV
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: KALNLVMTQIERSFGKGSIMRLGDATRMKVETVPTGALPLDLALGGGLPRGRVVEIYGPESSGKTTLALHAIAAVQQTGGIAAFVDAEHALDPAYAAVLGVDIQNLLISQPDTGETALEIVDQLVRSTAVDVVVIDSVAALVPKAEIEGDMGDAHVGLQARLMSQALRKITGNIGKTGCIVIFLNQLRQKIGVTYGNPETTTGGNALKFYASVRLDIRRVQTLKKGTEEFGNRVKVKVAKNKVAPPFRVAEFDIIFGKGI
type: DOMAIN
name: RecA-like_N
description: RecA-like, N-terminal
Protein sequence:
MSNTAKKSSRRETRAAASEYIYNLTGQPFPNSHKVYVEGTQNNIRVGMREITLSDTYIGGSDENPVYEPNEPLRVYDTSGPYTDPNFKLDVRQGLAKFREQWIESRGDTELLESVTSRFTQQRMADEGLDHLRFEHLPKIRRGKAGKNVTQMHYARQGIITPEMEYVAIRENMGRKKIHAELLAAQHKGESFGASIPDFITPEFVRDEIARGRAILPNNINHPETEPMIVGRNFLVKVNANIGNSSVSSSIEEEVEKMVWSTRWGADTVMDLSTGRYIHETREWVVRNSPVPIGTVPIYQALEKVNGVAEDLTWEIFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRVTGIVSRGGSIMAKWCLAHHKENFLYTHFEDICEILKQYDICFSLGDGLRPGSIADANDEAQFSELRTLGELTKLAWKHDVQVFIEGPGHVPMHMIKANMDEQLKHCDEAPFYTLGPLTTDIAPGYDHITSGIGAAQIAWYGCAMLCYVTPKEHLGLPNKEDVKEGLITYKIAAHAADLAKGHPGAQERDNALSKARFEFRWHDQFNIGLDPERAREYHDETLPQESGKVAHFCSMCGPKFCSMKISQEVREYAKDLEARGIDPANAADTITIKMIDVEAQMKAKSDEFKKTGSEIYHKAI

Annotated regions:
phrase: PFPNSHKVYVEGTQNNIRVGMREITLSDTYIGGSDENPVYEPNEPLRVYDTSGPYTDPNFKLDVRQGLAKFREQWIESRGDT
type: DOMAIN
name: ThiC-associated_dom
description: ThiC-associated domain
Protein sequence:
MSLTNKNVVFVAGLGGIGLDTSRELVKRDLKNLVILDRIDNPAAIAELKAINPKVTVTFYPYDVTVPVAETTKLLKTIFAQIKTIDVLINGAGILDDHQIERTIAVNYTGLVNTTTAILDFWDKRKGGPGGIICNIGSVTGFNAIYQVPVYSGSKAAVVNFTSSLAKLAPITGVTAYTVNPGITKTTLVHKFNSWLDVEPRVAEKLLEHPTQTSQQCAENFVKAIELNKNGAIWKLDLGTLESITWTKHWDSGI

Annotated regions:
phrase: SVTGFNAIYQVPVYSGSKAAVVNFTSSL
type: CONSERVED_SITE
name: Sc_DH/Rdtase_CS
description: Short-chain dehydrogenase/reductase, conserved site
Protein sequence:
MASLRKTHPILKIANSALVDLPAPSNISVWWNFGSLLGLCLITQLLTGLFLAMHYTSDIETAFSSVVHICRDVNYGWLIRNMHANGASFFFICLYMHIARGLYYGSYLFVETWNIGVVLFLLVMMTSFVGYVLPWGQMSFWGATVITNLMSTVPYVGDALVQWIWGGFSVDNATLTRFFAFHFLFPFVVAAFTMLHLLFLHETGSNNPTGINSNADKIPFHPYFTYKDLLGFAVMLLGLTALALFAPNLLGDPDNFTPANPIVTPPHVKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPFLHTSKQRGLTFRPLTQMLFWVLVADMLVLTWIGGVPVEHPFIIIGQVASVLYFSLFLVLFPLAGMTENKALEWN

Annotated regions:
phrase: GINSNADKIPFHPYFTYKDLLGFAVMLLGLTALALFAPNLLGDPDNFTPANPIVTPPHVKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPFLHTSKQRGLTFRPLTQMLFWVLVADMLVLTWIGGVPVEHPFIIIGQVASVLYFSLFLVLFPLAGMTENKALEW
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: VDLPAPSNISVWWNFGSLLGLCLITQLLTGLFLAMHYTSDIETAFSSVVHICRDVNYGWLIRNMHANGASFFFICLYMHIARGLYYGSYLFVETWNIGVVLFLLVMMTSFVGYVLPWGQMSFWGATVITNLMSTVPYVGDALVQWIWGGFSVDNATLTRFFAFHFLFPFVVAAFTMLHLLFLHET
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: PANPIVTPPHVKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPFLHTSKQRGLTFRPLTQMLFWVLVADMLVLTWIGGVPVEHPFIIIGQVASVLY
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: PILKIANSALVDLPAPSNISVWWNFGSLLGLCLITQLLTGLFLAMHYTSDIETAFSSVVHICRDVNYGWLIRNMHANGASFFFICLYMHIARGLYYGSYLFVETWNIGVVLFLLVMMTSFVGYVLPWGQMSFWGATVITNLMSTVPYVGDALVQWIWGGFSVDNATLTRFFAFHFLFPFVVAAFTMLHLLFLHETGS
type: DOMAIN
name: Cytochrome_b_N_euk/bac
description: Cytochrome b/b6, N-terminal domain, eukaryotic/bacterial

phrase: NPTGINSNADKIPFHPYFTYKDLLGFAVMLLGLTALALFAPNLLGDPDNFTPANPIVTPPHVKPEWYFLFAYAILRSIPNKLGGVLALLFSILVLMVVPFLHTSKQRGLTFRPLTQMLFWVLVADMLVLTWIGGVPVEHPFIIIGQV
type: DOMAIN
name: Cytochrome_b_C_euk/bac
description: Cytochrome b/b6, C-terminal domain, eukaryotic/bacterial

phrase: MASLRKTHPILKIANSALVDLPAPSNISVWWNFGSLLGLCLITQLLTGLFLAMHYTSDIETAFSSVVHICRDVNYGWLIRNMHANGASFFFICLYMHIARGLYYGSYLFVETWNIGVVLFLLVMMTSFVGYVLPWGQMSFWGATVITNLMSTVPYVGDALVQWIWGGFSVDNATLTRFFAFHFLFPFVVAAFTMLHLLFLHETGSNNP
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain
Protein sequence:
MRLIPSRLSYLFLHLFAFCYYAQVTIQSPPNFTQHVSEQSKVTDRVSRRLIRTYQLYSRTSGKHVQVLANKKINAMAEDGDVHAKLIVETDTFGSRVRIKGAETGFYICMNRRGKLIGKKNGLGKDCIFTEIVLENNYTALQNVKYEGWYMAFTRKGRPRKGSKTRQHQREVHFMKRLPKGHQIAEHRPFDFINYPFNRRTKRTRYSGER

Annotated regions:
Protein sequence:
MSTANRTFTGLLGTKLGMTQVWDENNKLIPVTVVQITPNVVTQVRTPEVDGYGAIQIAYGQIDPRKADKPSTGHFDKAGVTPRRHLTEVRTADFAEYTLGQEITVGAFEPGTKVDVVGTSKGKGFAGVMKRHNFKGVSASHGSHRNHRKPGSIGASSTPSRVFKGMRMAGRMGGERVTVLNLVVHSVDAEKGLLLVKGAVPGARGRIVFVRNAVKGK

Annotated regions:
phrase: FEPGTKVDVVGTSKGKGFAGVMK
type: CONSERVED_SITE
name: Ribosomal_uL3_CS
description: Large ribosomal subunit protein uL3, conserved site