nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MLLFALLLAMELPLVAASATMRAQWTYSLRCHDCAVINDFNCPNIRVCPYHIRRCMTISIRINSRELLVYKNCTNNCTFVYAAEQPPEAPGKIFKTNSFYWVCCCNSMVCNAGGPTNLERDMLPDEVTEEELPEGTVRLGVSKLLLSFASIIVSNILP

Annotated regions:
phrase: LRCHDCAVINDFNCPNIRVCPYHIRRCMTISIRINSRELLVYKNCTNNCTFVYAAEQPPEAPGKIFKTNSFYWVCCCNSMVCNAGGPTNLERDM
type: DOMAIN
name: LY6_UPA_recep-like
description: Ly-6 antigen/uPA receptor-like

phrase: RCHDCAVINDFNCPNIRVCPYHIRRCMTISIRINSRELLVYKNCTNN
type: CONSERVED_SITE
name: CD59_antigen_CS
description: CD59 antigen, conserved site
Protein sequence:
MEEIGILVEKAQDEIPALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK

Annotated regions:
phrase: IGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNASVALHKHSNALVDVL
type: DOMAIN
name: Prot_ATP_ID_OB_2nd
description: Proteasomal ATPase, second OB domain

phrase: VDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFE
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: VKVIMATNRADTLDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: PPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFP
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core
Protein sequence:
MSNQTYRDSEYLDGLSGEELFNLQIGLTYRDFLVLPGFIDFHPSEVELETRLTRNIKLKRPFISSPMDTVTESQMAIAQALMGGIGIIHYNNTIEEQVALVEKVKRFENGFITDPVILGPKNVIRDLDAIKERKGFTGIPVTEDGTRNSKLIGIVTNRDIDFEKNREITLDKVMTTNLITGKEGITLQDANEIIKKSKIGKLPIVDSQGKLVSLVSRSDLKKNKEFPDASKDERKRLRCGAAVSTLLESRDRVAALYEAGVDVIIIDSAQGNSNYQIEMIQFIKKEFKNLDIVAGNVVTRAQAENLIRAGADGLRIGMGPGSICITQDTMAVGRAQATAIYQTAKHSAKYDVPVIADGGISNIGDIANSLAIGASTCMMGFMFAGTTEAPGEYFYENGIRLKKYRGMASIEAMKAGGDKRYFNEGQKVKVAQGVSGSVVDRGSILNFIPYLSQGLRLSFQDMGYKSIPEIHKALRDGKLRFERRSESAQAQGSVHGLYSFSAPTMRAE

Annotated regions:
phrase: FITDPVILGPKNVIRDLDAIKERKGFTGIPVTEDGTRNSKLIGIVTNRDIDFEKNREIT
type: DOMAIN
name: CBS_dom
description: CBS domain

phrase: KVMTTNLITGKEGITLQDANEIIKKSKIGKLPIVDSQGKLVSLVSRSDLK
type: DOMAIN
name: CBS_dom
description: CBS domain

phrase: DPVILGPKNVIRDLDAIKERKGFTGIPVTEDGTRNSKLIGIVTNRDIDFEK
type: DOMAIN
name: CBS_dom
description: CBS domain

phrase: NLITGKEGITLQDANEIIKKSKIGKLPIVDSQGKLVSLVSRSDLKKNK
type: DOMAIN
name: CBS_dom
description: CBS domain

phrase: GLTYRDFLVLPGFIDFHPSEVELETRLTRNIKLKRPFISSPMDTVTESQMAIAQALMGGIGIIHYNNTIEEQVALVEKVKRFENGFITDPVILGPKNVIRDLDAIKERKGFTGIPVTEDGTRNSKLIGIVTNRDIDFEKNREITLDKVMTTNLITGKEGITLQDANEIIKKSKIGKLPIVDSQGKLVSLVSRSDLKKNKEFPDASKDERKRLRCGAAVSTLLESRDRVAALYEAGVDVIIIDSAQGNSNYQIEMIQFIKKEFKNLDIVAGNVVTRAQAENLIRAGADGLRIGMGPGSICITQDTMAVGRAQATAIYQTAKHSAKYDVPVIADGGISNIGDIANSLAIGASTCMMGFMFAGTTEAPGEYFYENGIRLKKYRGMASIEAMKAGGDKRYFNEGQKVKVAQGVSGSVVDRGSILNFIPYLSQGLRLSFQDMGYKSIPEIHKALRDGKLRFER
type: DOMAIN
name: IMP_DH_GMPRt
description: IMP dehydrogenase/GMP reductase

phrase: GLTYRDFLVLPGFIDFHPSEVELETRLTRNIKLKRPFISSPMDTVTESQMAIAQALMGGIGIIHYNNTIEEQVALVEKVKRFENGFITDPVILGPKNVIRDLDAIKERKGFTGIPVTEDGTRNSKLIGIVTNRDIDFEKNREITLDKVMTTNLITGKEGITLQDANEIIKKSKIGKLPIVDSQGKLVSLVSRSDLKKNKEFPDASKDERKRLRCGAAVSTLLESRDRVAALYEAGVDVIIIDSAQGNSNYQIEMIQFIKKEFKNLDIVAGNVVTRAQAENLIRAGADGLRIGMGPGSICITQDTMAVGRAQATAIYQTAKHSAKYDVPVIADGGISNIGDIANSLAIGASTCMMGFMFAGTTEAPGEYFYENGIRLKKYRGMASIEAMKAGGDKRYFNEGQKVKVAQGVSGSVVDRGSILNFIPYLSQGLRLSFQDMGYKSIPEIHKALRDGKLRFERRSESAQAQGSV
type: DOMAIN
name: IMP_DH_GMPRt
description: IMP dehydrogenase/GMP reductase

phrase: MTTNLITGKEGITLQDANEIIKKSKIGKLPIVDSQGKLVSLVSRSDLKKNKEFPDA
type: DOMAIN
name: CBS_dom
description: CBS domain

phrase: LRIGMGPGSICI
type: CONSERVED_SITE
name: IMP_DH/GMP_Rdtase_CS
description: IMP dehydrogenase / GMP reductase, conserved site
Protein sequence:
MAKLSKRAAAIAQKIDRTKLYPVAEALTLVKETATAKFDESIDVAVQLGIDPKKSDQLVRGSVVLPAGTGKSVRVAVFAQGEKAEAARAAGAEVVGLDDLAEQIKAGQMDFDVVIASPDTMRVVGALGQILGPRGLMPNPKVGTVTPDVATAVKNAKAGQVQYRTDKAGIIHATIGRASFGIEQLQTNLAALVDALQKARPAAAKGIYLRKIAVSSTMGGGARVEIASLSA

Annotated regions:
phrase: MRVVGALGQILGPRGLMP
type: CONSERVED_SITE
name: Ribosomal_uL1_CS
description: Large ribosomal subunit protein uL1, conserved site
Protein sequence:
MRVRGXRRNYQLLWRWGSMLLGMLMICSAEKLWVTVYYGVPVWKEATTTLFCASDAKAYDTEAHNVWATHACVPTDPNPQEIKLENVTENFNMWKNNMVDQMHEDVISLWDQSLKPCVKLTPLCVTLNCTDPLKNATNTNSSSQTQGEMKNCSFNVTSSVREKMQKEFALFYKXDIVPIDSDNDNTSYRLISCNASVLTQACPKISFEPIPIHYCAPAGFAILKCNDKRFNGTGPCKNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSENITDNIKNIIVQLKEPVKINCTRPNNNTRKSIPIGPMRAIYATGDIIGDIRQAHCTISKAGWNXTLGQIVGKLREHFKNETIXFKPSSGGDPEIVMHNFNCGGEFFYCNSTPLFNSSWSANSTWNSTGEGNDTITLQCRIKQIINLWQEVGKAIYAPPIAGKIKCSSNITGLILTRDGGNETTNATFRPGGGDMRDNWRSELYKYKVVQIEPLGVAPTRAKRRVVQREKRAALGALFLGFLGAAGSTMGAASITLTVQARLLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERFLADQQLLGXWGCSGKLICTTAVPWNASWSNKSLNEIWDNMTWMEWEREIBNYTSXIYSLIXESQNQQEKNEQDLLELXKWDSLWNWFNITNWLWYIKIFIMIVGGLIGLRIVFTVLSIVNRVRKGYSPLSFQTHXPTPRGLDRPEXXXEGDGEQDXDRSXPLVQGFLAIFWVDLRSLCLFLYHRLRDLLLIV

Annotated regions:
phrase: LWVTVYYGVPVWKEATTTLFCASDAKAYDTEAHNVWATHACVPTDPNPQEIKLENVTENFNMWKNNMVDQMHEDVISLWDQSLKPCVKLTPLCVTLNCTDPLKNATNTNS
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: QGEMKNCSFNVTSSVREKMQKEFALFYKXDIVPIDSDNDNTSYRLISCNASVLTQACPKISFEPIPIHYCAPAGFAILKCNDKRFNGTGPCKNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVIRSENITDNIKNIIVQLKEPVKINCTRPNNNTRKSIPIGPMRAIYATGDIIGDIRQAHCTISKAGWNXTLGQIVGKLREHFKNETIXFKPSSGGDPEIVMHNFNCGGEFFYCNSTPLFNSSWSANSTWNSTGEGNDTITLQCRIKQIINLWQEVGKAIYAPPIAGKIKCSSNITGLILTRDGGNETTNATFRPGGGDMRDNWRSELYKYKVVQIEPLGVAPTRAKRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: VQARLLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERFLADQQLLGXWGCSGKLICTTAVPWNASWSNKSLNEIWDNMTWMEWEREIBNYTSXIYSLIXESQNQQEKNEQDLLELX
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASITLTVQARLLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERFLADQQLLGXWGCSGKLICTTAVPWNASWSNKSLNEIWDNMTWMEWEREIBNYTSXIYSLIXESQNQQEKNEQDLLELXKWDSLWNWFNITNWLWYIKIFIMIVGGLIGLRIVFTVLSIVNRVRKGYSPLSFQ
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MSDFFHSDVLSVSELNAFAKSLLENHLAGLWIAGEVSNLTRAASGHYYFSLKDSRAQVRCAMFKGAAVRLAKPLKEGDHIEVSGKISIYEARGEFQITVNEVRLKGLGQLYEAYERLKAQLQAEGAFAAERKKPLPVRPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTPVQGAGSELQIAQAIKTASQRAECDVLIVCRGGGSIEDLWAFNEEPVVRAIESCTVPVVSGVGHETDFTLADFVADMRAPTPTGAAELVSPNRQESLHRLAQAQCRLKTVLEQRYFDASQKLDWLARQIRHPRQKLDEQRASIGKLAQTLSYSMTQNVRTHTARFERQTQALKHCRPDVSVCKKNIDRFQTALSHAFHQLLTHRRQSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHIIFADGETDVRVSKEQGQQDLFDCI

Annotated regions:
phrase: LWIAGEVSNLTRAASGHYYFSLKDSRAQVRCAMFKGAAVRLAKPLKEGDHIEVSGKISIYEARGEFQITVNEVRLK
type: DOMAIN
name: OB-fold_nuc-bd_dom
description: OB-fold nucleic acid binding domain

phrase: LSVSELNAFAKSLLENHLAGLWIAGEVSNLTRAASGHYYFSLKDSRAQVRCAMFKGAAVRLAKPLKEGDHIEVSGKISIYEARGEFQITVNE
type: DOMAIN
name: OB-fold_nuc-bd_dom
description: OB-fold nucleic acid binding domain

phrase: FAAERKKPLPVRPQCIGIVTSLAAAALRDVVTTLKRRAPEIPVIVYPTPVQGAGSELQIAQAIKTASQRAECDVLIVCRGGGSIEDLWAFNEEPVVRAIESCTVPVVSGVGHETDFTLADFVADMRAPTPTGAAELVSPNRQESLHRLAQAQCRLKTVLEQRYFDASQKLDWLARQIRHPRQKLDEQRASIGKLAQTLSYSMTQNVRTHTARFERQTQALKHCRPDVSVCKKNIDRFQTALSHAFHQLLTHRRQSLTAQAALLEAVSPQHILERGFSVVKNTRGQVIRNADVLKQGQKLHIIFADGETD
type: DOMAIN
name: Exonuc_VII_lsu_C
description: Exonuclease VII, large subunit, C-terminal
Protein sequence:
MKAIIVLLMVVTSNADRICTGITSSNSPHVVKTATQGEVNVTGVIPLTTTPTKSHFANLKGTKTRGKLCPNCLNCTDLDVALARPMCVGTTPSAKASILHEVRPVTSGCFPIMHDRTKIRQLPNLLRGYENIRLSTQNVINAERAPGGPYRLGTSGSCPNVTSRDGFFATMAWAVPRDNKTATNPLTVEVPYICTKGEDQITVWGFHSDNKTQMKNLYGDSNPQKFTSSANGVTTHYVSQIGGFPNQTEDGGLPQSGRIVVDYMVQKPGKTGTIVYQRGVLLPQKVWCASGRSKVIKGSLPLIGEADCLHAKYGGLNKSKPYYTGEHAKAIGNCPIWVKTPLKLANGTKYRPPAKLLKER

Annotated regions:
Protein sequence:
MTKSELKVKRIKNGTVIDHITANRSLNILNMLKLPDDETAIMVAINVESSDMGRKDIIKIEGRELSQDEVDKLVLLAPQATLNIIRDYQNIRKSHLHLMDEITDVVTCSNPNCITNSNEPIQKRFAVQNKQPITLRCYYCERTMEYDDIESQF

Annotated regions:
phrase: EITDVVTCSNPNCITNSNEPIQKRFAVQNKQPITLRCYYCERTMEYDD
type: DOMAIN
name: Asp_carbamoyltrfase_reg_C
description: Aspartate carbamoyltransferase regulatory subunit, C-terminal

phrase: LKVKRIKNGTVIDHITANRSLNILNMLKLPDDETAIMVAINVESSDMGRKDIIKIEGRELSQDEVDKLVLLAPQATLNIIRDYQNIRKSH
type: DOMAIN
name: Asp_carbamoyltransf_reg_N
description: Aspartate carbamoyltransferase regulatory subunit, N-terminal
Protein sequence:
MDIRRDFHMAEGEGEWSYSKNCRRQQVAVRETRPMVETAVKQVYAALLPRTMVVADLGCSAGPNTLLFISSVLSSIAAAAAEQCKPPSGGGDDDDHHVELQFVLNDLPGNDFNHLFRSVEEEFRRAAGCERAPHPPYYVMGLPESYYNRLFPRQSVHLFHSSYCLQWRSQEPEGLEAWRKPCLNEDNIYIARTTTPSVAKLFQEQFQKDFSLFLKLRHEELVHGGRMVLIFLGRKNEDVYSGDLNQLFALVATALQSLVLKGLVEKEKLESFNLPVYGPSVGEVEELVTRSGLQFSMDLIKQFEMNWDPFDDSEGDNDVVVVEDSARSSVNVAKLIRSVLKALVVRHFGEAVLDACFAEFRRLVAEHLGKEKTKFTTIAMCLKKE

Annotated regions:
Protein sequence:
MTHAVLSLLKEGRTKMRVHLIGVAGSGMSGLASLLLELGHSVSGSDRVSTVETTRLQKAGLTFHCPQHDREVDGADMVIYSSAVKPGNPAYEAAYKQGIPLVRRAEALAAIMARKAGVVVAGTHGKTTTSSMTAHVLRVGGMRPSHYVGAEIPILGANAHWDEEGELFVAEGDESDGTLVNFQPRHAIILNIEAEHLDFYEDLDAIKVVFRQLLEKTSGFSVYCAEDPVATELCQGRKNGVSYGWSRTCDFSAEIIELRPTQTEYEVYEGETKLGTVVLGIPGKHNVLNSLAALAMASRAGVPFDRIKQALESFRGARRRFESKYAGTNYQIIDDYGHHPTEIKATLATAKALKPKRLICLFQPHRYSRTQLLKKEFGQAFGDVDILCVTDVYAASEKPLPGVSGETIIEEVKAQSPVDCYSTPKLLQARDLIASKLQPGDLLITLGAGNVHEVGGCLAKDLKVAEQIIEILNREGSGVVKLYEPLSSHTTIRIGGPAQFWIQPSTIAGFVEVVRFLRAGSIPIRVIGRGSNLLVRDGGIRGAVIHPSKGEFDEVKVEGNRIIAGAGARLKKIASAAKAAGIGGFEWMEGIPGNLGGSLRMNAGAMGSQTFDQVVSVRFLDGGGEIREKTKDEIIHHYRSVPELDQHYAVSAVLEGRPADAAEIDAKMEASHTKRRESQPIGASAGCIFKNPGPIPAGKLVDELGLKKTGRGAAFVSEEHGNFILNDGGASARDVLDLINDIKQSALTERGIILETEVQIIGEEEPLG

Annotated regions:
phrase: IGGPAQFWIQPSTIAGFVEVVRFLRAGSIPIRVIGRGSNLLVRDGGIRGAVIHPSKGEFDEVKVEGNRIIAGAGARLKKIASAAKAAGIGGFEWMEGIPGNLGGSLRMNAGAMGSQTFDQVVSVRFLDGGGEIREKTKDEIIHHYRSVPELDQHYAVSAVLEGRP
type: DOMAIN
name: FAD-bd_PCMH
description: FAD-binding domain, PCMH-type

phrase: RRFESKYAGTNYQIIDDYGHHPTEIKATLATAKALKPKRLICLFQPHRYSRTQLLKKEFGQAFGDVDILCVTDVYAASEKPLPGVSGETIIEEVKAQSPVDCYSTPKLLQARDLIASKLQPGDLLITLGA
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: FWIQPSTIAGFVEVVRFLRAGSIPIRVIGRGSNLLVRDGGIRGAVIHPSKGEFDEVKVEGNRIIAGAGARLKKIASAAKAAGIGGFEWMEGIPGNLGGSLRMNAGAMGSQTFDQVVSVRFLDGGGEI
type: DOMAIN
name: Oxid_FAD_bind_N
description: FAD linked oxidase, N-terminal

phrase: EIDAKMEASHTKRRESQPIGASAGCIFKNPGPIPAGKLVDELGLKKTGRGAAFVSEEHGNFILNDGGASARDVLDLINDIKQSALTERGIILETEVQI
type: DOMAIN
name: MurB_C
description: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal

phrase: VAGTHGKTTTSSMTAHVLRVGGMRPSHYVGAEIPILGANAHWDEEGELFVAEGDESDGTLVNFQPRHAIILNIEAEHLDFYEDLDAIKVVFRQLLEKTSGFSVYCAEDPVATELCQGRKNGVSYGWSRTCDFSAEIIELRPTQTEYEVYEGETKLGTVVLGIPGKHNVLNSLAALAM
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: VHLIGVAGSGMSGLASLLLELGHSVSGSDRVSTVETTRLQKAGLTFHCPQHDREVDGADMVIYSSAVKPGNPAYEAAYKQGIPLVRRAEALAAIMAR
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain
Protein sequence:
MSTFFAKANAVERKWYVIDAAGLPLGRLATEAARILRGKHKPTFTPNVDTGDHVIIINAEKVVLTGNKLDQKMYRRHSGYPGGLKETPYRKLMQNMPERAVEHAVKGMLPHNKLGAQMYTKLKVYRDENHPHQAQQPEVWTIQ

Annotated regions:
phrase: VKGMLPHNKLGAQMYTKLKVYR
type: CONSERVED_SITE
name: Ribosomal_uL13_CS
description: Large ribosomal subunit protein uL13, conserved site
Protein sequence:
MTAVPPSCQILDGKALAQKMQGELQRDIAQLVAQGHRSPGLAVLMVGDNPASAVYVRNKEKACEKLGMVSFGKHFSADTDQETLTAAIASLNEDERVDGILVQLPLPDHLDAVKLLHTIDPSKDADGLHPVNLGHLVRGEEGLRSCTPAGVMALLAEYNLDLTGKNAVVLGRSILVGKPLALMLLEKNCTVTIAHSRTQNLADITRQADILVAAIGKPEFVTADMVKPGAIVVDVGINRLDLGEGKSTLVGDVDFAGVAPVASYLTPVPGGIGPMTVTLLLANTVASYRQRLGI

Annotated regions:
phrase: PGGIGPMT
type: CONSERVED_SITE
name: THF_DH/CycHdrlase_CS
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site

phrase: HPVNLGHLVRGEEGLRSCTPAGVMALLAEYNLDLTGKNAVVLGRSILVGKPLALMLLEKNCTVTIAHSRTQNLADITRQADILVAAIGKPEFVTADMVKPGAIVVDVGINRLDLGEGKSTLVGDVDFAGVAPVASYLTPVPGGIGPMTVTLLLANTVASYR
type: DOMAIN
name: THF_DH/CycHdrlase_NAD-bd_dom
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain

phrase: PSKDADGLHPVNLGHLVRGEEGLRSCTPAGVMALLAEYNLDLTGKNAVVLGRSILVGKPLALMLLEKNCTVTIAHSRTQNLADITRQADILVAAIGKPEFVTADMVKPGAIVVDVGINRLDLGEGKSTLVGDVDFAGVAPVASYLTPVPGGIGPMTVTLLLANTVASY
type: DOMAIN
name: THF_DH/CycHdrlase_NAD-bd_dom
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain

phrase: LDGKALAQKMQGELQRDIAQLVAQGHRSPGLAVLMVGDNPASAVYVRNKEKACEKLGMVSFGKHFSADTDQETLTAAIASLNEDERVDGILVQLPLPDHLDAVKLLHTIDPSKDA
type: DOMAIN
name: THF_DH/CycHdrlase_cat_dom
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
Protein sequence:
MSEPALHGRKILLIVGGGIAAYKSLELVRLLKKAGAEVRSILTESGAAFVTPLSLAALTGHPVRMGLFLPDEETTMGHIELSRWADLVVVAPATAGLIAKAANGLADDLASTTLLATDKRVLLAPAMNVRMWLHPAVRANVERLKSFPGLHGMAVVGPDEGEMACGEFGPGRMAEPAAILLAIAGLLSGPDARPLTGKRAVVTAGPTFEPIDPVRGLTNRSSGKQGYAIAAALAERGARVTLVSGPTGLATPVGVTRIEVETALEMQAATHAALPAHIAVLSAAVADWRVDTVAGGKIKKAPGGPPTLALIENPDILAGLAKPGPLRPALVIGFAAETTDLEANARAKLSRKGCDWIVGNDVSADVFGADGNTVLLVTKSGAEPWPRLSKAEVATRLADRIADHFG

Annotated regions:
phrase: KILLIVGGGIAAYKSLELVRLLKKAGAEVRSILTESGAAFVTPLSLAALTGHPVRMGLFLPDEETTMGHIELSRWADLVVVAPATAGLIAKAANGLADDLASTTLLATDKRVLLAPAMNVRMWLHPAVRANVERLKSFPGLHGMAVVGPDEGEMACGEFGPGRMAEPAAI
type: DOMAIN
name: Flavoprotein
description: Flavoprotein

phrase: LTGKRAVVTAGPTFEPIDPVRGLTNRSSGKQGYAIAAALAERGARVTLVSGPTGLATPVGVTRIEVETALEMQAATHAALPAHIAVLSAAVADWRVDTVAGGKIKKAPGGPPTLALIENPDILAGLAKPGPLRPALVIGFAAETTDLEANARAKLSRKGCDWIVGNDVSADVFGADGNTVL
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal
Protein sequence:
MSRFPAVAGRAPRRQEEGERPVELQEERPSAVRIADREEKGCTSQEGGTTPTFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLNKFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFPYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIRAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQKHRELAAKAGGFNDFATLAVIFEQCKSSGAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPRETFEGPKHEVLRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLPKLHELNAHDLSSVARREMRDDARRKWTNKENVKQLKDGISKEVLKKMQRRNDDKSISDARARFLERKQQRIQDHSDTLKETG

Annotated regions:
phrase: KKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLNKFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMEL
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: SVIILDEAH
type: CONSERVED_SITE
name: DNA/RNA_helicase_DEAH_CS
description: DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site

phrase: EALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIRAASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQKHRELAAKAGGFNDFATL
type: DOMAIN
name: Helicase-assoc_dom
description: Helicase-associated domain

phrase: ALKQLYQCDAIDRSGHVTRLGLSMVEFP
type: DOMAIN
name: HA2_WH
description: Helicase associated domain (HA2), winged-helix domain

phrase: LNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGR
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: FEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRT
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: IQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLNKFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDI
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: LRRCLCAGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYARIVCPIRYEWVRDLLP
type: DOMAIN
name: DEAD-box_helicase_OB_fold
description: DEAD-box helicase, OB fold

phrase: GGTTPTFPIQKQRKKLIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIGVTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILGDPNLNKFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELAKLSAFFGNCPIFDIPGRLYPVRE
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: TMDIHLNEMAGDILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCL
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like
Protein sequence:
MRIPVLHDFFIKEQLKSCVSGAVLFDEPLDRYTSMGVGGPADALVVPQSMEELVQLVRFLRKENIPFLTLGNGTNLIVRDGGCRGVVVALRGLQKLSWASDPEGKIRVQAEAGVPLASIVQLCIKESLAGLEFCTGIPGSVGGAVRMNAGAFGREMKDVVTAITVLNEHLELETLSRRELSFEYRRLNLSDEAVIVCAEFALCPGERESISAEISEILALRKSKHPLNFRNAGSIFKNPRNLPAGQLIEETGLKGTRRGDAMISEKHGNFIVNLGHARAADVVDLIEEIKGRVENCRAIQLEAEVHIVGEDG

Annotated regions:
phrase: ISAEISEILALRKSKHPLNFRNAGSIFKNPRNLPAGQLIEETGLKGTRRGDAMISEKHGNFIVNLGHARAADVVDLIEEIKGRVENCRAIQLEAEVHI
type: DOMAIN
name: MurB_C
description: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal

phrase: VGGPADALVVPQSMEELVQLVRFLRKENIPFLTLGNGTNLIVRDGGCRGVVVALRGLQKLSWASDPEGKIRVQAEAGVPLASIVQLCIKESLAGLEFCTGIPGSVGGAVRMNAGAFGREMKDVVTAITVLNEHLELETLSRRELSFEYRRLNLSDEAVIVCAEFALCP
type: DOMAIN
name: FAD-bd_PCMH
description: FAD-binding domain, PCMH-type

phrase: DALVVPQSMEELVQLVRFLRKENIPFLTLGNGTNLIVRDGGCRGVVVALRGLQKLSWASDPEGKIRVQAEAGVPLASIVQLCIKESLAGLEFCTGIPGSVGGAVRMNAGAFGREMKDVVTAITVLN
type: DOMAIN
name: Oxid_FAD_bind_N
description: FAD linked oxidase, N-terminal
Protein sequence:
MNINKIALIYNHNSKHLAIIEEIKQLYNYCKIEEAEVIIVIGGDGELLHNIHRYMHLNIPFYGVNLGSLGFLMNPLDTKKLLQNIHESTVSILNPLLMQVEDTSGQIYTALAINEVSIFRKTNQAAKFRIEVNGIERMSELVADGALVATPAGSSAYNLSASGPILPLESNMLCLTPICSFRPRRWHGALLLSSATIKFEILNTNKRPVNATADFQEFNNITNVTVKSTKDKPVKLLFNKNHTLEDRIIKEQFGG

Annotated regions:
Protein sequence:
MSSAIASRRYAAALLDVAEDSGVVEQVDTDLEMISATIADSHDLVVMLKSPLIKGDTKAKALKAVFHGMLNEKTLLFIDLICRKKRADHLPQMVEEYKALRDERSGLINVDVNSAVKLEDEQARELINSLATYTGKKVRARLALDEKLLGGVTVKIGDTIIDGSVRHQLDMLRVALTADV

Annotated regions:
Protein sequence:
MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQYARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPRFTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALGQNIAKTKAKGRGKSRPIVEPDNVPMDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRDQLHLLRELFIAAS

Annotated regions:
phrase: EGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQYA
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: LHLTVGMIIDQRAILRRLAELQYARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPRFTIYPKTH
type: DOMAIN
name: UvrB_inter
description: UvrB, interaction domain

phrase: QKIHELEGLMMQHAQNLEFEEAAQIRDQLHLLR
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: PSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAV
type: DOMAIN
name: Helicase/UvrB_N
description: Helicase/UvrB, N-terminal

phrase: DLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAAR
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: LYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKK
type: DOMAIN
name: UvrB_YAD/RRR_dom
description: UvrB, YAD/RRR-motif-containing domain

phrase: QQKIHELEGLMMQHAQNLEFEEAAQIRDQLHLLRE
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: SAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQYARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIVSTIPRFTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLENNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLDPIIE
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: EDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARN
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: QVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDI
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like
Protein sequence:
MIIPDLHTIMPIIITGVGALVVLLCGPLLLSGTTSSIAAVTAAAAGLWAIFTAPSAVPAVAGLTFTPLAQFLIPLFCAAALLTLLLSHGYNENRAIKGEEYPATVLFALFALCVLPCASNLLILFLAIESVSFAFYILVTMDLQRAESGEAGLKYLLMGAVAAAFTAFGFALIFAGSGTLELAGAVPHADNRAIVAAGWGVVIMGMAFKLSLVPAHLWTPDVYQGAPAPVAAFLSTSSKVAAASLLLMLLTFSPPMPELRIPLVLLSLLSMVVGNLAALRQQNIKRMLAYSSIAHMGYLTLALLTGTREGYAALLLYGAIYTAMNLAAFGAIASLSLEKERDQIADYSGLGFSAPLRGGVLALAMLALAGLPPTGGFIGKFFIFYSAIKGGETALAIVGIISAAVSSFFYLKVVASLYMHRSSSPAPRAAAAADAVALCCAAAFILLLGVFPAPLLRLVDAALQ

Annotated regions:
phrase: ASNLLILFLAIESVSFAFYILVTMDLQRAESGEAGLKYLLMGAVAAAFTAFGFALIFAGSGTLELAGAVPHADNRAIVAAGWGVVIMGMAFKLSLVPAHLWTPDVYQGAPAPVAAFLSTSSKVAAASLLLMLLTFSPPMPELRIPLVLLSLLSMVVGNLAALRQQNIKRMLAYSSIAHMGYLTLALLTGTREGYAALLLYGAIYTAMNLAAFGAIASLSLEKERDQIADYSGLGFSAPLRGGVLALAMLALAGLPPTGGFIGKFFIFYSAIKGGETALAIVGIISA
type: DOMAIN
name: ND/Mrp_TM
description: NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domain
Protein sequence:
MATSPQKSPSVPKSPTPKSPPSRKKDDSFLGKLGGTLARRKKAKEVSEFQEEGMNAINLPLSPISFELDPEDTMLEENEVRTMVDPNSRNDPKLQELMKVLIDWINDVLVGERIIVKDLAEDLYDGQVLQKLFEKLESEKLNVAEVTQSEIAQKQKLQTVLEKINEALKLPPRSIKWNVDSVHAKNLVAILHLLVALSQYFRAPIRLPDHVSIQVVVVQKREGILQSRQIQEEITGNTEALSGRHERDAFDTLFDHAPDKLNVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFEQKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKYRNVE

Annotated regions:
phrase: NVVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFEQKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKY
type: DOMAIN
name: CH_dom
description: Calponin homology domain

phrase: LMKVLIDWINDVLVGERIIVKDLAEDLYDGQVLQKLFEKLESEKLNVAEVTQSEIAQKQKLQTVLEKINEALKLPPRSIKWNVDSVHAKNLVAILHLLVALSQYF
type: DOMAIN
name: CH_dom
description: Calponin homology domain

phrase: VVKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFEQKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFTKY
type: DOMAIN
name: CH_dom
description: Calponin homology domain

phrase: VKKTLITFVNKHLNKLNLEVTELETQFADGVYLVLLMGLLEGYFVPLHSFFLTPDSFEQKVLNVSFAFELMQDGGLEKPKPRPEDIVNCDLKSTLRVLYNLFT
type: DOMAIN
name: CH_dom
description: Calponin homology domain

phrase: LMKVLIDWINDVLVGERIIVKDLAEDLYDGQVLQKLFEKLESEKLNVAEVTQSEIAQKQKLQTVLEKINEALKLPPRSIKWNVDSVHAKNLVAILHLLVALSQ
type: DOMAIN
name: CH_dom
description: Calponin homology domain

phrase: QELMKVLIDWINDVLVGERIIVKDLAEDLYDGQVLQKLFEKLESEKLNVAEVTQSEIAQKQKLQTVLEKINEALKLPPRSIKWNVDSVHAKNLVAILHLLVALSQYF
type: DOMAIN
name: CH_dom
description: Calponin homology domain
Protein sequence:
MKVAFVIRKDCKRCATIAKSIIELIPPDWEKIYDTEAAKFLGGVGKDITEISADIIIAIGGDGTVLRILQNAKGPVLGINMGGLGFLTEIEIDEVGSSTYKLIRGEYKINEAMKLKVYINGRRLEDCTNEAVVHTDRIARIRQFKIYVDGHFLTTIKSDGVIVATPTGSSSYSSSAGGPLLLPTVRGMVISYLAPYSSRIKPVVVPSESTVEIKIAGNDQDSLLILDGQKEYKIKSGDTVSISMSEEKARFVSFRESIYDRLRDKVIKHVVN

Annotated regions: