nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MEAAPGTPPPPPSESPPPPSPPPPSTPSPPPCSPDARPATPHLLHHRLPLPDDREDGELEEGELEDDGAEETQDTSGGPERSRKEKGEKHHSDSDEEKSHRRLKRKRKKEREKEKRRSKKRRKSKHKRHASSSDDFSDFSDDSDFSPSEKGHRKYREYSPPYAPSHQQYPPSHATPLPKKAYSKMDSKSYGMYEDYENEQYGEYEGDEEEDMGKEDYDDFTKELNQYRRAKEGSSRGRGSRGRGRGYRGRGSRGGSRGRGMGRGSRGRGRGSMGGDHPEDEEDFYEEEMDYGESEEPMGDDDYDEYSKELNQYRRSKDSRGRGLSRGRGRGSRGRGKGMGRGRGRGGSRGGMNKGGMNDDEDFYDEDMGDGGGGSYRSRDHDKPHQQSDKKGKVICKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAENCPYMHGDFPCKLYHTTGNCINGDDCMFSHDPLTEETRELLDKMLADDAEAGAEDEKEVEELKKQGINPLPKPPPGVGLLPTPPRPPGPQAPTSPNGRPMQGGPPPPPPPPPPPPGPPQMPMPVHEPLSPQQLQQQDMYNKKIPSLFEIVVRPTGQLAEKLGVRFPGPGGPPGPMGPGPNMGPPGPMGGPMHPDMHPDMHPDMHPDMHADMHADMPMGPGMNPGPPMGPGGPPMMPYGPGDSPHSGMMPPIPPAQNFYENFYQQQEGMEMEPGLLGDAEDYGHYEELPGEPGEHLFPEHPLEPDSFSEGGPPGRPKPGAGVPDFLPSAQRALYLRIQQKQQEEEERARRLAESSKQDRENEEGDTGNWYSSDEDEGGSSVTSILKTLRQQTSSRPPASVGELSSSGLGDPRLQKGHPTGSRLADPRLSRDPRLTRHVEASGGSGPGDSGPSDPRLARALPTSKPEGSLHSSPVGPSSSKGSGPPPTEEEEGERALREKAVNIPLDPLPGHPLRDPRSQLQQFSHIKKDVTLSKPSFARTVLWNPEDLIPLPIPKQDAVPPVPAALQSMPTLDPRLHRAATAGPPNARQRPGASTDSSTQGANLPDFELLSRILKTVNATGSSAAPGSSDKPSDPRVRKAPTDPRLQKPTDSTASSRAAKPGPAEAPSPTASPSGDASPPATAPYDPRVLAAGGLGQGGGGGQSSVLSGISLYDPRTPNAGGKATEPAADTGAQPKGAEGNGKSSASKAKEPPFVRKSALEQPETGKAGADGGTPTDRYNSYNRPRPKAAAAPAATTATPPPEGAPPQPGVHNLPVPTLFGTVKQTPKTGSGSPFAGNSPAREGEQDAASLKDVFKGFDPTASPFCQ

Annotated regions:
phrase: KKRELCKFYITGFCARAENCPYMH
type: DOMAIN
name: Znf_CCCH
description: Zinc finger, CCCH-type

phrase: PCKLYHTTGNCINGDDCMFSHDP
type: DOMAIN
name: Znf_CCCH
description: Zinc finger, CCCH-type

phrase: PKKRELCKFYITGFCARAENCPYMHGD
type: DOMAIN
name: Znf_CCCH
description: Zinc finger, CCCH-type

phrase: ICKYFVEGRCTWGDHCNFSH
type: DOMAIN
name: Znf-CCCH_4
description: E3 ligase, CCCH-type zinc finger

phrase: KKGKVICKYFVEGRCTWGDHCNFSHDI
type: DOMAIN
name: Znf_CCCH
description: Zinc finger, CCCH-type

phrase: KGKVICKYFVEGRCTWGDHCNFSHD
type: DOMAIN
name: Znf_CCCH
description: Zinc finger, CCCH-type

phrase: FPCKLYHTTGNCINGDDCMFSHD
type: DOMAIN
name: Znf_CCCH
description: Zinc finger, CCCH-type

phrase: KKRELCKFYITGFCARAENCPYMHG
type: DOMAIN
name: Znf_CCCH
description: Zinc finger, CCCH-type

phrase: FPCKLYHTTGNCINGDDCMFSHDPLTEETRELLDKML
type: DOMAIN
name: Znf-CCCH_ZC3H4/6/8
description: Zinc finger CCCH domain-containing protein 4/6/8, CCCH zinc finger
Protein sequence:
MQVTETLNSGLKREIKITVPAGDMEAKLMARLSDARNKVRINGFRPGKVPVQHLRKVYGKSFMAEVVNEILNDSTRSIITGRGEKAAMQPEVIMTEDEKEAEKILAGGTDFEFRLNYEVIPAIEIKDFSDIKVTRQVFDVPDAEIDDQVKRVAESARSYEPKTGKAAEGDRVSIDYVGKIDGEAFAGGAGTDQLLVLGSKEFIPGFEDQLIGTKAGDEKQVTVTFPENYQAAHLAGKEATFDVTVKEVSKPGELEINDETAKNLGLESLERLREIVRGQIENQFGSMTRQKVKRQLLDQLDAAYSFEAPSKLIDAEFNNIWAQVTRDLEAAGRTFADEETTEEEARAEYLRLAERRVRLGLVLAEIGEKAGVTVSDEELQRGLFEQVRRFPANQQQEAFEFYRSNPEALNALRAPMFEEKVVDHLLGQISVTDVKVSKEELMADDEDAETTTKAKPAKKAAAKKAEAKANEDEAEEPKKKAAPKKKAAKDAE

Annotated regions:
phrase: KAAEGDRVSIDYVGKIDGEAFAGGAGTDQLLVLGSKEFIPGFEDQLIGTKAGDEKQVTVTFPENYQAAHLAGKEATFDVT
type: DOMAIN
name: PPIase_FKBP_dom
description: FKBP-type peptidyl-prolyl cis-trans isomerase domain

phrase: MQVTETLNSGLKREIKITVPAGDMEAKLMARLSDARNKVRINGFRPGKVPVQHLRKVYGKSFMAEVVNEILNDSTRSIITGRGEKAAMQPEVIMTEDEKEAEKILAGGTDFEFRLNYEVIPAIEIKDFSDIKVTRQVFDVPDAEIDDQVK
type: DOMAIN
name: Trigger_fac_ribosome-bd_bac
description: Trigger factor, ribosome-binding, bacterial

phrase: GDRVSIDYVGKIDGEAFAGGAGTDQLLVLGSKEFIPGFEDQLIGTKAGDEKQVTVTFPENYQAAHLAGKEATFDVTVKEVSK
type: DOMAIN
name: PPIase_FKBP_dom
description: FKBP-type peptidyl-prolyl cis-trans isomerase domain

phrase: SLERLREIVRGQIENQFGSMTRQKVKRQLLDQLDAAYSFEAPSKLIDAEFNNIWAQVTRDLEAAGRTFADEETTEEEARAEYLRLAERRVRLGLVLAEIGEKAGVTVSDEELQRGLFEQVRRFPANQQQEAFEFYRSNPEALNALRAPMFEEKVVDHL
type: DOMAIN
name: Trigger_fac_C
description: Trigger factor, C-terminal
Protein sequence:
MWKIGQRGVPYFQRLIAAPFTTLRSLPTSLVETGQNRVIDASLTLIRERAKLKGELVRLIGGAKATTALLGVPLGHNSSFLEGPALAPPHVREAIWCGSTNSTTEEGKELKDPRVLSDVGDIPVQEIREMGVDDDRLMKVVSESVKLVMEEEPLRPLVIGGDHSISYPVVRAVSEKLGGPVDILHLDAHPDIYDRFEGNYYSHASSFARIMEGGYARRLLQVGIRSINKEGREQGKRFGVEQYEMRTFSKDRQMLENLKLGEGVKGVYISIDVDCLDPGFAHGVSHFEPGGLSFRDVLNILHNLQGDLVGADVVEYNPQRDTADDMTAMVAAKFVRELAAKMSK

Annotated regions:
Protein sequence:
MKKLYIKTFGCQMNEYDSGKMADLLHADEGMVMTDRPEDADVVLLNTCSIREKAEDKVFSDLGRLRELKKTKPNLLIGVGGCVASQEGQQIVSHAPYVDVVFGPQTLHRLSDLIAKRRETGLFQVDISFPEIEKFDHLPASRQTRGSAYVSIMEGCSKYCSYCVVPYTRGEEVSRSFDDVLTEVAGLASKGVKEIVLLGQNVNAYLGKMGDRQEIADFALLIEYIVEIPGVERIRFTTSHPKEFTQRLIDVYTKVPKLVSHLHLPVQHGSDAMLSAMKRGYTALEFKSIIRKMRAVRPDLTLSSDFIVGFPGETEADFEKLLKMVEELNFDNSFCFIFSPRPGTPAANLHDDTPYEVKLKRLQTLLALVESQANQISQKMLGNIERVLIEGLAKDGINLQGRAENNRVIHFTAPAQNIENLIGQMVDIRITEVLNYTLRGKLVEAYVH

Annotated regions:
phrase: KKLYIKTFGCQMNEYDSGKMADLLHADEGMVMTDRPEDADVVLLNTCSIREKAEDKVFSDLGRLRELKKTKPNLLIGVGGCVASQEGQQIVSHAPYVDVVFGPQTLHRLSDLIAKRR
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: GSAYVSIMEGCSKYCSYCVVPYTRGEEVSRSFDDVLTEVAGLASKGVKEIVLLGQNVNAYLGKMGDRQEIADFALLIEYIVEIPGVERIRFTTSHPKEFTQRLIDVYTKVPKLVSHLHLPVQHGSDAMLSAMKRGYTALEFKSIIRKMRAVRPDLTLSSDFIVGFPGETEADFEKLLKMVEELNFDNSFCFIFSPRPGTPAANLHDDTPYEVKLKRLQTLL
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: QKMLGNIERVLIEGLAKDGINLQGRAENNRVIHFTAPAQNIENLIGQMVDIRITEVLNYTLRGKLV
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: KLYIKTFGCQMNEYDSGKMADLLHADEGMVMTDRPEDADVVLLNTCSIREKAEDKVFSDLGRLRELKKTKPNLLIGVGGCVASQEGQQIVSHAPYVDVVF
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: QKMLGNIERVLIEGLAKDGINLQGRAENNRVIHFTAPAQNIENLIGQMVDIRITEVLNYTLRGKL
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: RQTRGSAYVSIMEGCSKYCSYCVVPYTRGEEVSRSFDDVLTEVAGLASKGVKEIVLLGQNVNAYLGKMGDRQEIADFALLIEYIVEIPGVERIRFTTSHPKEFTQRLIDVYTKVPKLVSHLHLPVQHGSDAMLSAMKRGYTALEFKSIIRKMRAVRPDLTLSSDFIVGFPGETEADFEKLLKMVEELNFDNSFCFIFSPRPGTPAANLHDDTPYEVKLKRLQTLLALVESQANQI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VSIMEGCSKYCSYCVVPYTRGEEVSRSFDDVLTEVAGLASKGVKEIVLLGQNVNAYLGKMGDRQEIADFALLIEYIVEIPGVERIRFTTSHPKEFTQRLIDVYTKVPKLVSHLHLPVQHGSDAMLSAMKRGYTALEFKSIIRKMRAVRPDLTLSSDFIVGFPGETEADFEKLLK
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VSIMEGCSKYCSYCVVPYTR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site
Protein sequence:
MHPIVIVGTGLAGFNTVKEFRKLDKETPIVMLTADDGRNYSKPMLSAGFSKGKTADDLCMATPEKVAEQLNVDVRTGVHVAGIDATNKRVLLPDDHLDYSKLVLALGADTWTPPLEGDAVGEVFSVNDLMDYGKFRAAVEGKKTVTILGGGLIGCEFANDLSNGGFKVSLVEPMGRCLPLLLPEQASEAVGRGLADLGVQFHFGPLAKAVHHGDNGQLVTELSDGSQLESDVVLSAIGLRPRISLAKEAGLDTNRGILTDKSLRTSAEHIYALGDCAEVQGHVLPYVLPLMASARALAKTLAGETTEVSYGVMPVTIKTPACPVVVCPAAEGSEGAWEVEAEGNTVQALFRSKDGSLLGYALTGEAVKEKMKLNKELPAIMP

Annotated regions:
phrase: PIVIVGTGLAGFNTVKEFRKLDKETPIVMLTADDGRNYSKPMLSAGFSKGKTADDLCMATPEKVAEQLNVDVRTGVHVAGIDATNKRVLLPDDHLDYSKLVLALGADTWTPPLEGDAVGEVFSVNDLMDYGKFRAAVEGKKTVTILGGGLIGCEFANDLSNGGFKVSLVEPMGRCLPLLLPEQASEAVGRGLADLGVQFHFGPLAKAVHHGDNGQLVTELSDGSQLESDVVLSAIGLRPRISLAKEAGLDTNRGILTDKSLRTSAEHIYALGDCAEV
type: DOMAIN
name: FAD/NAD-binding_dom
description: FAD/NAD(P)-binding domain

phrase: EVSYGVMPVTIKTPACPVVVCPAAEGSEGAWEVEAEGNTVQALFRSKDGSLLGYALTGEAVKEKMKLNKE
type: DOMAIN
name: Rbx-bd
description: Rubredoxin binding domain
Protein sequence:
MVKSYTLAGLAAIACLLLAIGAVISTVYILNDISDFYSEAQEELVEFKDIANNIWEEMVFELTPEEMREAEDNDREKRSYEPEGPYQSETTTPSTTTSTAATTTEAAEDESGYDFVNDNGPPSSRPRKPEPPTMPRTIQGFRAPPPAATSTYRPPHGSNYDNYGREPASSRRPYPPQQPPSTSAPHSSPNNRTSLYNPQPPPKTGYPTNPRVPYNPPQPNYTRQPTYPEDNRAPYKPTRSPNTPPPRQPSGGYDSDGQTPPSSPRIYNTRRPNNHGPGYPEDQVPTAPPVPGQQRVPPTQTRNPPNPTNTRQPSRPVPPTSDGHIEATTPYNPSAQYPTGKRGSHPGFGPQRPRPGTRPRGNPCDQCSAQPNHCPSGPPGPRGRPGPPGFPGQDGPRGLRGLNGGYSGVQPSSYDPVIGCVQCPIGPPGERGPDGTPGVPGEDGIDGEQGVNGQDGQPGAPGAPGYHGMNGSPGTPGKPGLPGRNGQSCKSIPGPPGQPGVMGVPGRDGDPGTDGEHGQDGSPGIQGPPGRDGTSGPDGQPGVSAPGAPGTDGGYCPCPKRSSKFDFNDAYNDDEKRGLEEHRPRGYDSERAEEPRPRQTVRTNTYDENSGAEHQRRPNYEPSAEVAPPRQDRYEDEERVREPPPKRPPPPHRQTPHELYPEEQPYVRRPPPPQNRGNYEVERSREYVPEAPRPRQGYEHSSGYGGDDRKEQPKYMESRPVDEPRYETDAPSRSRPLKKVEIIRHPERGYDRRQPSYEDSKPRQEEPRRYETEAEPRYEEVPRKETHPPGFGRPKSEENPRETGRTYSEEAMPPVQQTEKYNGDKRKKNQPEYEDISKPEEDKERAMEKHHKKPNKFQEKQWEEHRKSQELRNSREHGGQVPVETSVPMQQVKPESSAEEKPVPPVHDNFQSSEKRAFSNENPLPSEQIPYRRRNRFYRNHYYEKFLV

Annotated regions:
phrase: TLAGLAAIACLLLAIGAVISTVYILNDISDFYSEAQEELVEFKDIANNIWEE
type: DOMAIN
name: Col_cuticle_N
description: Nematode cuticle collagen, N-terminal

phrase: GPPGQPGVMGVPGRDGDPGTDGEHGQDGSPGIQGPPGRDGTSGPDGQPGVSAPGAP
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: GPPGERGPDGTPGVPGEDGIDGEQGVNGQDGQPGAPGAPGYHGMNGSPGTPGKPGLPG
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: AAIACLLLAIGAVISTVYILNDISDFYSEAQEELVEFKDIANNIWEE
type: DOMAIN
name: Col_cuticle_N
description: Nematode cuticle collagen, N-terminal
Protein sequence:
MTQPSELITDDIEQYLARHANKSMLRFITCGSVDDGKSTLIGRLLYESKLVFEDQLSALEADSRKVGTQGEGLDFALLVDGLAAEREQGITIDVAYRYFSTEQRKFVVADTPGHEQYTRNMVTGASTADLAVILIDARKGVLTQTRRHSYLVSLLGIRHVVIAVNKLDLVDYSQEVFDDIVAEYTSFANEIGLGGVVAIPMSAYVGDNLTERSSNTPWYQGPTLIEHLEDVEIDDDLRNGPFRMPVQWVNRPNLDFRGFSGQIVGGTVRPGDRLRVLPSGKESAVARIVTMDGDLDEAVAGQSVTITLADEIDVSRGDVLAGAEALPGVADQFEAHVVWMGEHEMLPERPYVCQIGTMTVQARITKPKHKVNVNTLEKTATNTLALNEIGVCNISFDRPVPFDAYAANRDTGGFILIDRLTNTTVGAGMIAHSLRRSDNIHWQAVDVDGDARRALNGHGSHVLWFTGLSGSGKSTIANDLERKLYALGCHTYLLDGDNIRHGLGRDLGFTEADRVENIRRVTEVARLMADAGLIVLASFISPFRADRDAAREVIGPDQFCEVFVDTPIEVAEQRDPKGLYKKARRGDLTNFTGVDSPYEPPENPELRIRTTTTTPEEASGLVVEFLRDRGIIA

Annotated regions:
phrase: FRMPVQWVNRPNLDFRGFSGQIVGGTVRPGDRLRVLPSGKESAVARIVTMDGDLDEAVAGQSVTITLADEIDVSRGDVLA
type: DOMAIN
name: CysN_II
description: Sulfate adenylyltransferase subunit CysN, Domain II

phrase: VADQFEAHVVWMGEHEMLPERPYVCQIGTMTVQARITKPKHKVNVNTLEKTATNTLALNEIGVCNISFDRPVPFDAYAANRDTGGFILIDRLTNTTVGAGM
type: DOMAIN
name: CysN_NoDQ_III
description: Sulfate adenylyltransferase subunit CysN, Domain III

phrase: RFITCGSVDDGKS
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: EQGITIDV
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: VVADTPGHEQ
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: TGASTADLAVI
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: VVIAVNKLD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: QFEAHVVWMGEHEMLPERPYVCQIGTMTVQARITKPKHKVNVNTLEKTATNTLALNEIGVCNISFDRPVPFDAYAANRDTGGFILIDRLTNTTVGAGM
type: DOMAIN
name: GTP-eEF1A_C
description: GTP-eEF1A, C-terminal domain

phrase: KSMLRFITCGSVDDGKSTLIGRLLYESKLVFEDQLSALEADSRKVGTQGEGLDFALLVDGLAAEREQGITIDVAYRYFSTEQRKFVVADTPGHEQYTRNMVTGASTADLAVILIDARKGVLTQTRRHSYLVSLLGIRHVVIAVNKLDLVDYSQEVFDDIVAEYTSFANEIGLGGVVAIPMSAYVGDNLTERSSNTPWYQGPTLIEHLEDVEIDDDL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: GQIVGGTVRPGDRLRVLPSGKESAVARIVTMDGDLDEAVAGQSVTITLADEIDVSRGDVL
type: DOMAIN
name: EFTu-like_2
description: Translation elongation factor EFTu-like, domain 2

phrase: SMLRFITCGSVDDGKSTLIGRLLYESKLVFEDQLSALEADSRKVGTQGEGLDFALLVDGLAAEREQGITIDVAYRYFSTEQRKFVVADTPGHEQYTRNMVTGASTADLAVILIDARKGVLTQTRRHSYLVSLLGIRHVVIAVNKLDLVDYSQEVFDDIVAEYTSFANEIGLGGVVAIPMSAYVGDNL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: DGLAAEREQGITIDV
type: CONSERVED_SITE
name: G_TR_CS
description: Tr-type G domain, conserved site

phrase: RFITCGSVDDGKSTLIGRLLYESKLVFEDQLSALEADSRKVGTQGEGLDFALLVDGLAAEREQGITIDVAYRYFSTEQRKFVVADTPGHEQYTRNMVTGASTADLAVILIDARKGVLTQTRRHSYLVSLLGIRHVVIAVNKLDLVDYSQEVFDDIVAEYTSFANEIGLGGVVAIPMSAYVGDNLTERSSNTPWYQGPTLIEHLEDVEID
type: DOMAIN
name: CysN_GTP-bd
description: Sulfate adenylyltransferase subunit CysN, GTP-binding domain
Protein sequence:
MRSAHTVEQVRAAEAELMVRLPEGALMQRAAAGLAYAVLDLLGSAYGRRALLLVGSGDNGGDALYAGALLARRGVQVQAWLLSDQAHAGGVAALRAAGGRTITGGPDRPDVVVDGIVGIGGRGGLREHAVAALATVPDVPVVAVDTPSGVGVDTGELDGPHVTATVTVTFGTHKVAHLVDPAASACGAVHLVDIGLDLPEAPVESLQPEDVAALLPRPHGEVQKYQRGVVGVRAGSAQYPGAALLSVAGASSGLCGMVRYVGDADVADRVCETHPEVVGTGRVQAWVVGSGGGEHAGDELRAALADEVPVVADADALGHVDGSVPVPAVLTPHAGELARMLGVERTEVEARPLAHARHAAATYRCVVLLKGRHTLVATPEGRVRATTTGTPWLATAGAGDVLGGVIGALLAAGLTPYDAASVGSWLHGAAATLAARRGPLVAGDVARALPAAVRNLPGW

Annotated regions:
phrase: KYQRGVVGVRAGSAQYPGAALLSVAGASSGLCGMVRYVGDADVADRVCETHPEVVGTGRVQAWVVGSGGGEHAGDELRAALADEVPVVADADALGHVDGSVPVPAVLTPHAGELARMLGVERTEVEARPLAHARHAAATYRCVVLLKGRHTLVATPEGRVRATTTGTPWLATAGAGDVLGGVIGALLAAGLTPYDAASVGSWLHGAAATLAARRGPLVAGDVARAL
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: VRAAEAELMVRLPEGALMQRAAAGLAYAVLDLLGSAYGRRALLLVGSGDNGGDALYAGALLARRGVQVQAWLLSDQAHAGGVAALRAAGGRTITGGPDRPDVVVDGIVGIGGRGGLREHAVAALATVPDVPVVAVDTPSGVGVDTGELDGPHVTATVTVTFGTHKVAHLVDPAASACGAVHLVDIGLDLPEA
type: DOMAIN
name: YjeF_N_dom
description: YjeF N-terminal domain

phrase: ALMQRAAAGLAYAVLDLLGSAYGRRALLLVGSGDNGGDALYAGALLARRGVQVQAWLLSDQAHAGGVAALRAAGGRTITGGPDRPDVVVDGIVGIGGRGGLREHAVAALATVPDVPVVAVDTPSGVGVDTGELDGPHVTATVTVTFGTHK
type: DOMAIN
name: YjeF_N_dom
description: YjeF N-terminal domain

phrase: GVRAGSAQYPGAALLSVAGASSGLCGMVRYVGDADVADRVCETHPEVVGTGRVQAWVVGSGGGEHAGDELRAALADEVPVVADADALGHVDGSVPVPAVLTPHAGELARMLGVERTEVEARPLAHARHAAATYRCVVLLKGRHTLVATPEGRVRATTTGTPWLATAGAGDVLGGVIGALLAAGLTPYDAASVGSWLHGAAATLAAR
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: QPEDVAALLPRPHGEVQKYQRGVVGVRAGSAQYPGAALLSVAGASSGLCGMVRYVGDADVADRVCETHPEVVGTGRVQAWVVGSGGGEHAGDELRAALADEVPVVADADALGHVDGSVPVPAVLTPHAGELARMLGVERTEVEARPLAHARHAAATYRCVVLLKGRHTLVATPEGRVRATTTGTPWLATAGAGDVLGGVIGALLAAGLTPYDAASVGSWLHGAAATLAARRGPLVAGDVARALPAAVRN
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: RSAHTVEQVRAAEAELMVRLPEGALMQRAAAGLAYAVLDLLGSAYGRRALLLVGSGDNGGDALYAGALLARRGVQVQAWLLSDQAHAGGVAALRAAGGRTITGGPDRPDVVVDGIVGIGGRGGLREHAVAALATVPDVPVVAVDTPSGVGVDTGELDGPHVTATVTVTFGTHKVAHLVDPAASACGAVHLVDIGL
type: DOMAIN
name: YjeF_N_dom
description: YjeF N-terminal domain

phrase: QPEDVAALLPRPHGEVQKYQRGVVGVRAGSAQYPGAALLSVAGASSGLCGMVRYVGDADVADRVCETHPEVVGTGRVQAWVVGSGGGEHAGDELRAALADEVPVVADADALGHVDGSVPVPAVLTPHAGELARMLGVERTEVEARPLAHARHAAATYRCVVLLKGRHTLVATPEGRVRATTTGTPWLATAGAGDVLGGVIGALLAAGLTPYDAASVGSWLHGAAATLAARRGPLVAGDVARALPAAVRNLP
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: VAALLPRPHGEVQKYQRGVVGVRAGSAQYPGAALLSVAGASSGLCGMVRYVGDADVADRVCETHPEVVGTGRVQAWVVGSGGGEHAGDELRAALADEVPVVADADALGHVDGSVPVPAVLTPHAGELARMLGVERTEVEARPLAHARHAAATYRCVVLLKGRHTLVATPEGRVRATTTGTPWLATAGAGDVLGGVIGALLAAGLTPYDAASVGSWLHGAAATLAARRGPLVAGDVARALPAA
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase
Protein sequence:
MAPYRLDVISLAPQAFAPLPEVGVIGRAFGAKIAELHLHNPRDHAIDRHRKVDDVPYGGGAGMVLKPEPVFAAFESVPVCSRRRVLLMSPQGQPLRQVDLQRWSQDYDQLVFLCGHYEGFDERIRSLADEEVSMGDFVLTGGELPAMTIINGVVRLLPGTVGTPESLVEESHSDLLLEHSHYTRPADFRGMTVPDVLRSGDHGAVALWRQQQREQRTQERRPDLWNRWQQIQNPTPPAP

Annotated regions:
phrase: FGAKIAELHLHNPRDHAIDRHRKVDDVPYGGGAGMVLKPEPVFAAFESVPVCSRRRVLLMSPQGQPLRQVDLQRWSQDYDQLVFLCGHYEGFDERIRSLADEEVSMGDFVLTGGELPAMTIINGVVRLLPGTVGTPESLVEESHSDLLLEHSHYTRPADFRGMTVPDVLRSGDHGAVALWRQQQREQRTQERR
type: DOMAIN
name: tRNA_MeTrfase_TRMD/TRM10
description: tRNA methyltransferase TRMD/TRM10-type domain
Protein sequence:
MLLRRLEMLNFRNFARQAVEPGLYFNVLSGRNAQGKTNILESIYLACTGRSFRTAREKELIKREKEFSSIRCLFETRGREVEVKVTLVPGRKRIEVNGVLKSGHPFGWPGVVLFTPDDLVMIKGSPAERRRFLDYDLGPFHPHYAHCLDRYNRVLSQRNALLREAKEKRTTGGPLEVWDEQLCRYGSRLLFLRVSLLKKFFPAIRALHRELTEGAENIEISYLSSLKIGEECGEDEIYERFSGELRLVRDEEIARMQTLVGPHRDDLHIKVDGHDARVYCSQGQQRTIVLTLKVFLIEQWRSETGEYPILLLDDVLFELDDNRREALMCRLGGLVQTFLTCTRVNFDIEGFKAKVFTVSGGEVT

Annotated regions:
phrase: ILLLDDVLFELDDNRREA
type: CONSERVED_SITE
name: DNA-binding_RecF_CS
description: DNA-binding, RecF, conserved site

phrase: RLEMLNFRNFARQAVEPGLYFNVLSGRNAQGKTNILESIYLACTGRSFRTAREKELIKREKEFSSIRCLFETRGREVEVKVTLVPG
type: DOMAIN
name: Rad50/SbcC_AAA
description: Rad50/SbcC-type AAA domain
Protein sequence:
MASMAATASSTTVVKATPFLGQTKNANPLRDVVAMGSARFTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGNDLYPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHLDNPVANNAWVYATKFVPGA

Annotated regions:
Protein sequence:
MEGRLNNMWRLTVNESKFVESALQSELRVDGRGLYDYRKLTIKFGKEYGSSQVQLGQTHVMAFVTAQLVQPYKDRPSEGSFSIFTEFSPMADPSFEPGHPGESAVELGRIIDRALRESRAVDTESLCVLAGKLVWSVRIDLHILDNGGNLVDAANVAALAALMTFRRPDCTVGGDNSQDVIIHPPEEREPLPLIIHHLPIAFTFGFFNKGSILVMDPTYVEEAVMCGRMTVTVNANGDICAIQKPGEEGVNQSVILHCLRLASSRASATTKIIRDAVEAYNRERSSQKVKRHHTLAKSEVLGPIVVV

Annotated regions:
phrase: HLPIAFTFGFFNKGSILVMDPTYVEEAVMCGRMTVTVNANGDICAIQKPGEEGVNQSVILHCLRLAS
type: DOMAIN
name: ExoRNase_PH_dom2
description: Exoribonuclease, phosphorolytic domain 2

phrase: YRKLTIKFGKEYGSSQVQLGQTHVMAFVTAQLVQPYKDRPSEGSFSIFTEFSPMADPSFEPGHPGESAVELGRIIDRALRESRAVDTESLCVLAGKLVWSVRIDLHILDNGGNLVDAANVAALAALMTFRR
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1
Protein sequence:
MGGEEEVVSVELPAPSSWKKLFYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGNPAIAEFDWTTSGTPRRSARISEKTKATPSPDKEPPKKRGRTKSPVSKKDAEGEKSEGGGEENSHVKDTEMNPPEGIAENENVTDKNGSGETERVNDAKENIVAEETPNAAPVQEEGESMKEKALDSVDDKSKETDKEKDTGSIEKNSVDVEKKTVEASDEKKNSEAETRNHEENGLTTEAEGKEKTAEGEATG

Annotated regions:
phrase: EEEVVSVELPAPSSWKKLFYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGNPAIAEFDWTTSG
type: DOMAIN
name: Methyl_CpG_DNA-bd
description: Methyl-CpG DNA binding

phrase: VVSVELPAPSSWKKLFYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGNPAIAEFDWTT
type: DOMAIN
name: Methyl_CpG_DNA-bd
description: Methyl-CpG DNA binding
Protein sequence:
MASTTLSIATTIRSSSPLTSASTHHFLSKPTAIEFPFRLSSSSSHRAINLRPISAVEAPEKIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPADGGAAAVVEEQTEFDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGITKDEAEEAKKTLEEAGAKVSIA

Annotated regions:
phrase: KIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPADGGA
type: DOMAIN
name: Ribosomal_bL12_oligo
description: Large ribosomal subunit protein bL12, oligomerization

phrase: FDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGITKDEAEEAKKTLEEAGAKVS
type: DOMAIN
name: Ribosomal_bL12_C
description: Large ribosomal subunit protein bL12, C-terminal
Protein sequence:
MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVNAAAHTDVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQGGTDATAPLNVYGETKLSSEKKALQKHCGKHIIFRTSWVYAGKGNNFAKTMLRLAKEREELAVINDQFGRPTGAELLADCTAHAIRVAVDKPEVAGLYHLVAGGTTTWHDYAALVFEEARKAGINLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNELFTTTAI

Annotated regions:
phrase: MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPEGVAETVKKIRPDVIVNAAAHTDVDKAESEPEFAQLLNATSVEAIAKAANEVGAWVIHYSTDYVFPGTGEIPWQGGTDATAPLNVYGETKLSSEKKALQKHCGKHIIFRTSWVYAGKGNNFAKTMLRLAKEREELAVINDQFGRPTGAELLADCTAHAIRVAVDKPEVAGLYHLVAGGTTTWHDYAALVFEEARKAGINLALNKLNAVPTTAYPTPARRPHNSRLNTEKFQQNFALVLPDWQVGVKRMLNE
type: DOMAIN
name: RmlD-like-bd
description: RmlD-like substrate binding domain
Protein sequence:
MADYLISGGTGYVPEDGLTAQQLFANADGLTYNDFLILPGFIDFTADEVDLTSALTRKITLKTPLISSPMDTVTEADMAIAMALMGGIGFIHHNCTPEFQANEVRKVKKFEQGFITDPVVLSPSHTVGDVLEAKIRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAEKDHTTLLSEVMTPRNELVVAPAGVTLKEANEILQRSKKGKLPIVNDRDELVAIIARTDLKKNRDYPLASKDSHKQLLCGAAVGTREDDKYRLDLLTQAGADVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPVIADGGIQTVGHVVKALALGASTVMMGSLLAATTEAPGEYFFSDGVRLKKYRGMGSLDAMEKSSSSQKRYFSEGDKVKIAQGVSGSIQDKGSIQKFVPYLIAGIQHGCQDIGARSLSVLRSMMYSGELKFEKRTMSAQIEGGVHGLHSYEKRLY

Annotated regions:
phrase: ELVVAPAGVTLKEANEILQRSKKGKLPIVNDRDELVAIIARTDLKKNR
type: DOMAIN
name: CBS_dom
description: CBS domain

phrase: DPVVLSPSHTVGDVLEAKIRHGFSGIPITETGTMGSKLVGIVTSRDIDFLA
type: DOMAIN
name: CBS_dom
description: CBS domain

phrase: TDPVVLSPSHTVGDVLEAKIRHGFSGIPITETGTMGSKLVGIVTSRD
type: DOMAIN
name: CBS_dom
description: CBS domain

phrase: SEVMTPRNELVVAPAGVTLKEANEILQRSKKGKLPIVNDRDELVAIIARTDLK
type: DOMAIN
name: CBS_dom
description: CBS domain

phrase: MTPRNELVVAPAGVTLKEANEILQRSKKGKLPIVNDRDELVAIIARTDLKKNRDYPLA
type: DOMAIN
name: CBS_dom
description: CBS domain

phrase: LRVGMGCGSICI
type: CONSERVED_SITE
name: IMP_DH/GMP_Rdtase_CS
description: IMP dehydrogenase / GMP reductase, conserved site

phrase: FITDPVVLSPSHTVGDVLEAKIRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAEKDHT
type: DOMAIN
name: CBS_dom
description: CBS domain

phrase: GLTYNDFLILPGFIDFTADEVDLTSALTRKITLKTPLISSPMDTVTEADMAIAMALMGGIGFIHHNCTPEFQANEVRKVKKFEQGFITDPVVLSPSHTVGDVLEAKIRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAEKDHTTLLSEVMTPRNELVVAPAGVTLKEANEILQRSKKGKLPIVNDRDELVAIIARTDLKKNRDYPLASKDSHKQLLCGAAVGTREDDKYRLDLLTQAGADVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPVIADGGIQTVGHVVKALALGASTVMMGSLLAATTEAPGEYFFSDGVRLKKYRGMGSLDAMEKSSSSQKRYFSEGDKVKIAQGVSGSIQDKGSIQKFVPYLIAGIQHGCQDIGARSLSVLRSMMYSGELKFEKRTMSAQIEGGV
type: DOMAIN
name: IMP_DH_GMPRt
description: IMP dehydrogenase/GMP reductase

phrase: GLTYNDFLILPGFIDFTADEVDLTSALTRKITLKTPLISSPMDTVTEADMAIAMALMGGIGFIHHNCTPEFQANEVRKVKKFEQGFITDPVVLSPSHTVGDVLEAKIRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAEKDHTTLLSEVMTPRNELVVAPAGVTLKEANEILQRSKKGKLPIVNDRDELVAIIARTDLKKNRDYPLASKDSHKQLLCGAAVGTREDDKYRLDLLTQAGADVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDGLRVGMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPVIADGGIQTVGHVVKALALGASTVMMGSLLAATTEAPGEYFFSDGVRLKKYRGMGSLDAMEKSSSSQKRYFSEGDKVKIAQGVSGSIQDKGSIQKFVPYLIAGIQHGCQDIGARSLSVLRSMMYSGELKFEK
type: DOMAIN
name: IMP_DH_GMPRt
description: IMP dehydrogenase/GMP reductase
Protein sequence:
MSTAILVSLLRNGRCQVNRGALTLCFQKEHSCTTSTRHCFSANRRCFSSRFDLDGSGRPATWDSFGIWDNRIDEPIQLPPSIKYGKLIPHINLSKVGCSTQLGKRKENEDRFKLARLTPDILYFAVYDGHGGASAAEFCDRFMEDYIKEFLVEEHDMEKVLVKAFLEINKAFARHAHLSVDASLLTCGTTATVALLRDGIELVVASVGDSRALLCRRGKPFKLTIDHTPERKEEKLRIKKSGGFVTWNSLGQPNVNGRLAMTRSIGDLDLKSMGVIAEPETKRVKLQHTDDGFLVLTTDGINFIVNSQEICDIINQCHDPKEAAQVLTEQAIQYGTEDNSTAIVVPFGAWGKHKSSEVSFSFSRGFASSGRWD

Annotated regions:
phrase: YFAVYDGH
type: BINDING_SITE
name: PP2C_BS
description: PPM-type phosphatase, divalent cation binding

phrase: KVGCSTQLGKRKENEDRFKLARLTPDILYFAVYDGHGGASAAEFCDRFMEDYIKEFLVEEHDMEKVLVKAFLEINKAFARHAHLSVDASLLTCGTTATVALLRDGIELVVASVGDSRALLCRRGKPFKLTIDHTPERKEEKLRIKKSGGFVTWNSLGQPNVNGRLAMTRSIGDLDLKSMGVIAEPETKRVKLQHTDDGFLVLTTDGINFIVNSQEICDIINQCHDPKEAAQVLTEQAIQYGTEDNSTAIVVP
type: DOMAIN
name: PPM-type_phosphatase-like_dom
description: PPM-type phosphatase-like domain

phrase: SKVGCSTQLGKRKENEDRFKLARLTPDILYFAVYDGHGGASAAEFCDRFMEDYIKEFLVEEHDMEKVLVKAFLEINKAFARHAHLSVDASLLTCGTTATVALLRDGIELVVASVGDSRALLCRRGKPFKLTIDHTPERKEEKLRIKKSGGFVTWNSLGQPNVNGRLAMTRSIGDLDLKSMGVIAEPETKRVKLQHTDDGFLVLTTDGINFIVNSQEICDIINQCHDPKEAAQVLTEQAIQYGTEDNSTAIVVP
type: DOMAIN
name: PPM-type_phosphatase-like_dom
description: PPM-type phosphatase-like domain

phrase: LTPDILYFAVYDGHGGASAAEFCDRFMEDYIKEFLVEEHDMEKVLVKAFLEINKAFARHAHLSVDASLLTCGTTATVALLRDGIELVVASVGDSRALLCRRGKPFKLTIDHTPERKEEKLRIKKSGGFVTWNSLGQPNVNGRLAMTRSIGDLDLKSMGVIAEPETKRVKLQHTDDGFLVLTTDGINFIVNSQEICDIINQCHDPKEAAQVLTEQAIQYGTED
type: DOMAIN
name: PPM-type_phosphatase-like_dom
description: PPM-type phosphatase-like domain

phrase: GKLIPHINLSKVGCSTQLGKRKENEDRFKLARLTPDILYFAVYDGHGGASAAEFCDRFMEDYIKEFLVEEHDMEKVLVKAFLEINKAFARHAHLSVDASLLTCGTTATVALLRDGIELVVASVGDSRALLCRRGKPFKLTIDHTPERKEEKLRIKKSGGFVTWNSLGQPNVNGRLAMTRSIGDLDLKSMGVIAEPETKRVKLQHTDDGFLVLTTDGINFIVNSQEICDIINQCHDPKEAAQVLTEQAIQYGTEDNSTAIV
type: DOMAIN
name: PPM-type_phosphatase-like_dom
description: PPM-type phosphatase-like domain

phrase: KVGCSTQLGKRKENEDRFKLARLTPDILYFAVYDGHGGASAAEFCDRFMEDYIKEFLVEEHDMEKVLVKAFLEINKAFARHAHLSVDASLLTCGTTATVALLRDGIELVVASVGDSRALLCRRGKPFKLTIDHTPERKEEKLRIKKSGGFVTWNSLGQPNVNGRLAMTRSIGDLDLKSMGVIAEPETKRVKLQHTDDGFLVLTTDGINFIVNSQEICDIINQCHDPKEAAQVLTEQAIQYGTEDNSTAIVVP
type: DOMAIN
name: PPM-type_phosphatase-like_dom
description: PPM-type phosphatase-like domain