nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MQKFDTRTFQGLILTLQDYWARQGCTIVQPLDMEVGAGTSHPMTCLRALGPEPMATAYVQPSRRPTDGRYGENPNRLQHYYQFQVVIKPSPENIQELYLGSLKELGMDPTIHDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPVTGEITYGLERLAMYIQGVDSVYDLVWSDGPLGKTTYGDVFHQNEVEQSTYNFEYADVDFLFTCFEQYEKEAQQLLALENPLPLPAYERILKAAHSFNLLDARKAISVTERQRYILRIRTLTKAVAEAYYASREALGFPMCNKEK

Annotated regions:
Protein sequence:
MKISVKTLKGSTFQIEVDSAQKVADVKRIIETTQGQHIYPAEQQMLIHQGKVLKDDTTLDENKVLENSFLVIMLRQGKGSSSSAPATSKAPSNQAPPTQTVPAAPASQAPVAPATTVPVTVSAPTPTATASPAPAVAVSSEADNYGQATSNLVAGSNLEATIQSILEMGGGIWDRDIVLHALSAAFNNPERAVEYLYSGVPEQMDIPVPPPSIQPANPTQASQATQPAAPSILSSGPNASPLDLFPQALPNASTDAAGLGNLDALRNNAQFRTLLSLVQANPQILQPLLQELGKQNPQILQLIQENQAEFLHLINEPAEGDDEENLLDQFPEAMPQTIAVTPEENEAILRLEAMGFDRALVLDVFFACNKDEQLAANYLLDHMNEFDDEGPP

Annotated regions:
phrase: ISVKTLKGSTFQIEVDSAQKVADVKRIIETTQGQHIYPAEQQMLIHQGKVLKDDTTLDENKVLENSFLVIMLR
type: DOMAIN
name: Ubiquitin-like_dom
description: Ubiquitin-like domain

phrase: GNLDALRNNAQFRTLLSLVQANPQILQPLLQELGKQNPQILQL
type: DOMAIN
name: STI1_HS-bd
description: Heat shock chaperonin-binding

phrase: ENEAILRLEAMGFDRALVLDVFFACNKDEQLAANYLL
type: DOMAIN
name: UBA
description: Ubiquitin-associated domain

phrase: LEATIQSILEMGGGIWDRDIVLHALSAAFNNPERAVEYLY
type: DOMAIN
name: UBA
description: Ubiquitin-associated domain

phrase: MKISVKTLKGSTFQIEVDSAQKVADVKRIIETTQGQHIYPAEQQMLIHQGKVLKDDTTLDENKVLENSFLVIMLRQGK
type: DOMAIN
name: Ubiquitin-like_dom
description: Ubiquitin-like domain

phrase: SNLEATIQSILEMGGGIWDRDIVLHALSAAFNNPERAVEYLYS
type: DOMAIN
name: UBA
description: Ubiquitin-associated domain

phrase: LDALRNNAQFRTLLSLVQANPQILQPLLQELGKQNPQILQLIQENQAEFLHLINEP
type: DOMAIN
name: XPC-bd
description: XPC-binding domain

phrase: EENEAILRLEAMGFDRALVLDVFFACNKDEQLAANY
type: DOMAIN
name: UBA
description: Ubiquitin-associated domain

phrase: EATIQSILEMGGGIWDRDIVLHALSAAFNNPERAVEY
type: DOMAIN
name: UBA
description: Ubiquitin-associated domain

phrase: PEENEAILRLEAMGFDRALVLDVFFACNKDEQLAANYLLD
type: DOMAIN
name: UBA
description: Ubiquitin-associated domain

phrase: MKISVKTLKGSTFQIEVDSAQKVADVKRIIETTQGQHIYPAEQQMLIHQGKVLKDDTTLDENKVLENSFLVIML
type: DOMAIN
name: Ubiquitin-like_dom
description: Ubiquitin-like domain
Protein sequence:
MLSRTILFSTSFLWVRVANAAFGITTSDDSYVIDAGSANSLKFTVSRSSCDITSINYYGSELQYSGTGSHIGSGLGSADVSAVEDGDYIKVTCDTDTLTQYFVVHNGDSVIHMATYTTEEPSVGELRFIARLNSELLPNEEPFGDVSTTSGGEAIEGSDVFLVDGETRSKFYSSQRFIDDQRHCVAGDAHRVCMILNQYETSSGGPFFRDINSNNGGSYNSLYWYMNSGHVQTEDRRQGLHGPYSMYFSRSGTPSTDIDTSFFANLDIKGYVAADGRGTVSGTASGADSSFKWVVHWYNADAQYWTYTSSDGSFTSPAMKPGDYTMVYYQGEYKVAETSVSVTAGSSTSKDISGFVETGDTIFKIGDWDGTPTGFRNAENQLRMHPSDSRMSSWGPLTYTVGSSELTDFPMAAFKGVNDPVTIKFTATSAQTGAATLRIGTTLSFAGGRPQATINDYEGSAPSAPTNLNSRGVTRGAYRGLGEVYDVNIPSGTIVEGENTITISVISGSSGDEFLAPNFIFDCVELFQ

Annotated regions:
phrase: FGITTSDDSYVIDAGSANSLKFTVSRSSCDITSINYYGSELQYSGTGSHIGSGLGSADVSAVEDGDYIKVTCDTDTLTQYFVVHNGDSVIHMATYTTEEPSVGELRFIARLNSELLPNEEPFGDVSTTSGGEAIEGSDVFLVDGETRSKFYSSQRFIDDQRHCVAGDAHRVCMILNQYETSSGGPFFRDINSNNGGSYNSLYWYMNSGHVQTEDRRQGLHGPYSMYFSRSGTPSTDIDTSFFANLDIK
type: DOMAIN
name: RhgB_N
description: Rhamnogalacturonase B, N-terminal

phrase: TIFKIGDWDGTPTGFRNAENQLRMHPSDSRMSSWGPLTYTVGSSELTDFPMAAFKGVNDPVTIKFTATSAQTGAATLRIGTTLSFAGGRPQATINDYEGSAPSAPTNLNSRGVTRGAYRGLGEVYDVNIPSGTIVEGENTITISVISGSSGDEFLAPNFIFDCVE
type: DOMAIN
name: RG-lyase_III
description: Rhamnogalacturonan lyase, domain III

phrase: GRGTVSGTASGADSSFKWVVHWYNADAQYWTYTSSDGSFTSPAMKPGDYTMVYYQGEYKVAETSVSVTAGSS
type: DOMAIN
name: RG-lyase_II
description: Rhamnogalacturonan lyase, domain II

phrase: GRGTVSGTASGADSSFKWVVHWYNADAQYWTYTSSDGSFTSPAMKPGDYTMVYYQGEYKVAETSVSVTAGSST
type: DOMAIN
name: RG-lyase_II
description: Rhamnogalacturonan lyase, domain II
Protein sequence:
MIGFEIFLAIGMFTAIVLGLVAIILVARAKLVSSGDVTIQINGEHSLTVPAGGKLLQTLAANNVFLSSACGGGGTCAQCKCVVVDGGGEMLPTEESHFTRRQAKEGWRLSCQTPVKQDMQIRVPEEVFGVKKWECTVESNPNVATFIKELTLRLPDGESVDFRAGGYVQLECPPHVVEYKDFDIQPEYRGDWDKFNMWRYVSKVDETVIRAYSMANYPEEKGVVKFNIRIASPPPGSDLPPGQMSSWVFNLKPGDKVTVYGPFGEFFAKDTEAEMVFIGGGAGMAPMRSHIFDQLRRLRSTRKISFWYGARSLREAFYTEEYDQLQAENPNFQWHLALSDPQPEDNWTGLTGFIHNVLFENYLKDHPAPEDCEFYMCGPPMMNAAVIKMLTDLGVERENILLDDFGG

Annotated regions:
phrase: GDVTIQINGEHSLTVPAGGKLLQTLAANNVFLSSACGGGGTCAQCKCVVVDGGGEMLPTEESHFTRRQAKEGWRLSCQTPVKQDMQIRVPEE
type: DOMAIN
name: 2Fe-2S_ferredoxin-type
description: 2Fe-2S ferredoxin-type iron-sulfur binding domain

phrase: FIGGGAGMAPMRSHIFDQLRRLRSTRKISFWYGARSLREAFYTEEYDQLQAENPNFQWHLALSDPQPEDNWTGLTGFIHNVLFENYLKDHPAPEDCEFYMCGPPMMNAA
type: DOMAIN
name: OxRdtase_FAD/NAD-bd
description: Oxidoreductase FAD/NAD(P)-binding

phrase: QINGEHSLTVPAGGKLLQTLAANNVFLSSACGGGGTCAQCKCVVVDGGGEMLPTEESHFTRRQAKEGWRLSCQTPV
type: DOMAIN
name: 2Fe-2S_ferredoxin-type
description: 2Fe-2S ferredoxin-type iron-sulfur binding domain

phrase: VTIQINGEHSLTVPAGGKLLQTLAANNVFLSSACGGGGTCAQCKCVVVDGGGEMLPTEESHFTRRQAKEGWRLSCQTPVKQDMQI
type: DOMAIN
name: 2Fe-2S_ferredoxin-type
description: 2Fe-2S ferredoxin-type iron-sulfur binding domain

phrase: DETVIRAYSMANYPEEKGVVKFNIRIASPPPGSDLPPGQMSSWVFNLKPGDKVTVYGPFGE
type: DOMAIN
name: Cbr1-like_FAD-bd_dom
description: Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain

phrase: VKKWECTVESNPNVATFIKELTLRLPDGESVDFRAGGYVQLECPPHVVEYKDFDIQPEYRGDWDKFNMWRYVSKVDETVIRAYSMANYPEEKGVVKFNIRIASPPPGSDLPPGQMSSWVFNLKPGDKVTVYGPFGEFFA
type: DOMAIN
name: FAD-bd_FR_type
description: FAD-binding domain, ferredoxin reductase-type
Protein sequence:
MAAGRGPARWESLPGRGARLGSLAGMRIGIVGATGQVGGVMRQVLAEREFPAEQVRMFASARSAGRTLPWRGGEITVEDAATADYRGLDIVLFSAGKGSARELAPRVAEAGAVVIDNSSAFRMDPEVPLVVAEVNPHAIADRPKGIVANPNCTTMAAMPVLRPLHAEAELVSMVVATYQAVSGAGLAGVAELDEQVRKVAEHAAGLAFDGSAVEFPAPRSFAQPIAFNVLPLAGSIVDDGSLETDEEQKLRNESRKILENPGLKVSGTCVRVPVFTGHSLQINARFARPITPARARELLDGAPGVALVDVPTPLQAAGQDPTYVGRIRADETVEHGLALFCSNDNLRKGAALNAVQLAELVAAERR

Annotated regions:
phrase: RIGIVGATGQVGGVMRQVLAEREFPAEQVRMFASARSAGRTLPWRGGEITVEDAATADYRGLDIVLFSAGKGSARELAPRVAEAGAVVIDNSSAFRMDPEVPLVVAEVNPHAIAD
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: LRPLHAEAELVSMVVATYQAVSGAGLAGVAELDEQVRKVAEHAAGLAFDGSAVEFPAPRSFAQPIAFNVLPLAGSIVDDGSLETDEEQKLRNESRKILENPGLKVSGTCVRVPVFTGHSLQINARFARPITPARARELLDGAPGVALVDVPTPLQAAGQDPTYVGRIRADETVEHGLALFCSNDNLR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: RIGIVGATGQVGGVMRQVLAEREFPAEQVRMFASARSAGRTLPWRGGEITVEDAATADYRGLDIVLFSAGKGSARELAPRVAEAGAVVIDNSSAFRMDPEVPLVVAEVNPHAIA
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: VSGTCVRVPVFTGH
type: CONSERVED_SITE
name: Asp-semialdehyde_DH_CS
description: Aspartate-semialdehyde dehydrogenase, conserved site
Protein sequence:
MELTKLLNSVNTIQVSGIIERKDISSIVYDSRKVKKNSLFVAVTGFTTDGHKFIIDAINKGAVAVILENNNAVPEEIFIHSKVAKILVKDSRAALAEVSDCFYKNPSSKLSLVGITGTKGKTTTSYFLKNIFETAGYKTGLVGTIANYIADRQIYTQLTTPESCDLNELFSEMINENCSHAIMEVSSHSLVLNRVKNLSFKVAVFTNITSDHLDFHKSFDEYLKAKKILFDSLTEDSVVVFNKDDVSWSKLIEGTKAKCYSYGKTSGSDFQLDNVHFDLDGTRFTIKHDGKTYNFSTKLIGEFNAYNAAASFATSFVLGIKPETIVEGINSTPQVPGRFETIKKKNKTVIVDYSHTADSLEKALLALRSITKNSEPVYTVFGCGGNRDKTKRPVMGKIASELSDHAIITSDNPRFEDPFEIIKEIEAGISKKNFEVIENREEAIKRAIDISEPNSAILIAGKGHENYQEIKGVRNHFSDKEIAEKYL

Annotated regions:
phrase: ITGTKGKTTTSYFLKNIFETAGYKTGLVGTIANYIADRQIYTQLTTPESCDLNELFSEMINENCSHAIMEVSSHSLVLNRVKNLSFKVAVFTNITSDHLDFHKSFDEYLKAKKILFDSLTEDSVVVFNKDDVSWSKLIEGTKAKCYSYGKTSGSDFQLDNVHFDLDGTRFTIKHDGKTYNFSTKLIGEFNAYNAAASFA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRFETIKKKNKTVIVDYSHTADSLEKALLALRSITKNSEPVYTVFGCGGNRDKTKRPVMGKIASELSDHAIITSDNPRFEDPFEIIKEIEAGISKKNFEVIENREEAIKRAIDISEPNSAILIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: ISSIVYDSRKVKKNSLFVAVTGFTTDGHKFIIDAINKGAVAVILENNNAVPEEIFIHSKVAKILVKDSRAALAEVSDC
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain
Protein sequence:
MNKELESIYQNIANQSELGQTANYDSYYNPKRLYPIPRAPKRQEINLDPNSTTFYGFDCWNHYEVSWLNSKGKPVVAMAVISYDCHSPCIIESKSLKLYFNSLNNSTFPDVETVVQTISKDLSYCIGSEVAVNVYPLSDIPNQTIYAAFDGVCLDKLDIECSVYHVMPDFLSTSSELVEEVLYSDLLKSNCLVTNQPDWGSVQIIYKGKKINHEGLLKYLISFRNHNEFHEQCIERIFADIMRFCQPESLTVYGRYTRRGGLDINPIRSTEPCAFDGQNIRLIRQ

Annotated regions:
phrase: YDSYYNPKRLYPIPRAPKRQEINLDPNSTTFYGFDCWNHYEVSWLNSKGKPVVAMAVISYDCHSPCIIESKSLKLYFNSLNNSTFPDVETVVQTISKDLSYCIGSEVAV
type: DOMAIN
name: QueF_N
description: NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal
Protein sequence:
MLNSHNRTEERSTEDIILEPYTYLISQPGKDIRAKLISAFDLWLHVPKDVLCVINKIIGMLHNASLMIDDVQDDSDLRRGVPVAHHIYGVPQTINTANYVIFLALQEVMKLNIPSMMQVCTEELINLHRGQGIELYWRDSLTCPTEEEYIDMVNNKTSGLLRLAVRLMQAASESDIDYTPLVNIIGIHFQVRDDYMNLQSTSYTNNKGFCEDLTEGKFSFPIIHAIRKDPSNRQLLNIISQKPTSIEVKKYALEVIRKAGSFEYVREFLRQKEAESLKEIKRLGGNPLLEKYIETIRVEATND

Annotated regions:
phrase: IGIHFQVRDDYM
type: CONSERVED_SITE
name: Polyprenyl_synt_CS
description: Polyprenyl synthetase, conserved site

phrase: LMIDDVQDDSDLRR
type: CONSERVED_SITE
name: Polyprenyl_synt_CS
description: Polyprenyl synthetase, conserved site
Protein sequence:
MSQEMTLQERMDGEGGSDPLRQAVKGAVAALAQAAIDISDLTCRGALAGITGQAQGRNTDGDVQKDLDVRADQIIRDALGKQPIAALASEEMEELDILNPGAPICVAFDPLDGSSNINTNMSVGTIFSIMPTPSDVNAAFRQAGSEQLAAGFVVYGPQTSLVLTLGQGVDIFTLDRVDRVFKLTGSAVKIPAEATEFAINASNRRHWDLPVRAYIDECLAGADGAGGKNYNMRWIGSLVAEAFRILIRGGIFLYPGDARDGYEEGRLRLVYEAHPMAFIVEQAGGGASTGRKRVLDLVPGSLHQRVPLIMGSIKNVQRLEHLHTVPDGALEANAPLFGNRGLFRV

Annotated regions:
phrase: IPAEATEFAINASNRRHWDLPVRAYIDECLAGADGAGGKNYNMRWIGSLVAEAFRILIRGGIFLYPGDARDGYEEGRLRLVYEAHPMAFIVEQAGGGASTGRKRVLDLVPGSLHQRVPLIMGSIKNVQRLEHL
type: DOMAIN
name: FBPase_C_dom
description: Fructose-1-6-bisphosphatase class 1, C-terminal

phrase: RQAVKGAVAALAQAAIDISDLTCRGALAGITGQAQGRNTDGDVQKDLDVRADQIIRDALGKQPIAALASEEMEELDILNPGAPICVAFDPLDGSSNINTNMSVGTIFSIMPTPSDVNAAFRQAGSEQLAAGFVVYGPQTSLVLTLGQGVDIFTLDRVDRVFK
type: DOMAIN
name: FBPase_N
description: Fructose-1-6-bisphosphatase class I, N-terminal

phrase: GRLRLVYEAHPM
type: ACTIVE_SITE
name: Fructose_bisphosphatase_AS
description: Fructose-1,6-bisphosphatase, active site
Protein sequence:
FGSLLGICLLTQIITGLLLAMHYTADTSLAFTSVAHTCRNVQFGWLIRNLHANGASFFFICIYFHIGRGIYYGSYLNKETWNIGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIAGLTLVHLTFLHETGSNNPLGIPSDCDKIPFHPYYSTKDILGFALMFILLVSLALFSPNSLGDPENFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLVLFLLPLLHTSKQRSMTFRPLSQILFWALVANLLILTWVGS

Annotated regions:
phrase: NPLGIPSDCDKIPFHPYYSTKDILGFALMFILLVSLALFSPNSLGDPENFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLVLFLLPLLHTSKQRSMTFRPLSQILFWALVANLLILTWVG
type: DOMAIN
name: Cytochrome_b_C_euk/bac
description: Cytochrome b/b6, C-terminal domain, eukaryotic/bacterial

phrase: FGSLLGICLLTQIITGLLLAMHYTADTSLAFTSVAHTCRNVQFGWLIRNLHANGASFFFICIYFHIGRGIYYGSYLNKETWNIGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIAGLTLVHLTFLHETGSNNP
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: FGSLLGICLLTQIITGLLLAMHYTADTSLAFTSVAHTCRNVQFGWLIRNLHANGASFFFICIYFHIGRGIYYGSYLNKETWNIGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIAGLTLVHLTFLHET
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: FGSLLGICLLTQIITGLLLAMHYTADTSLAFTSVAHTCRNVQFGWLIRNLHANGASFFFICIYFHIGRGIYYGSYLNKETWNIGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIAGLTLVHLTFLHETGS
type: DOMAIN
name: Cytochrome_b_N_euk/bac
description: Cytochrome b/b6, N-terminal domain, eukaryotic/bacterial

phrase: GIPSDCDKIPFHPYYSTKDILGFALMFILLVSLALFSPNSLGDPENFTPANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLVLFLLPLLHTSKQRSMTFRPLSQILFWALVANLLILTWVG
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: PANPLSTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASVLVLFLLPLLHTSKQRSMTFRPLSQILFWALVANLLILTWVG
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal
Protein sequence:
MAHITINQYLQQVCEAIDTRDGASLAELVSFKHPHVANPRLQMASPEEKCQQVLEPPYDEMFAAHLRCTYAVGNHDFIEAYKCQTVIVQSFLRAFQAHKEENWALPVMYAVALDLRIFANNADQQLVKKGKSKVGDMLEKAAELLMGCFRVCASDTRAGIEDSKKRGMLFLVNQLFKIYFKINKLHLCKPLIRAIDSSNLKDDYSTAQRVTYRYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMVLIYLLPVKMLLGHMPTIELLRKYHLMQFAEVTRAVSEGNLLLLNEALAAHETFFIRCGIFLILEKLKIITYRNLFKKVNSLSSASSRYLLLKTHQLSLDAFLVALKFMQVEDVDIAEVQCILANLIYMGHIKGYISHQHQKLVVSKQNPFPPLSTVC

Annotated regions:
phrase: LAAHETFFIRCGIFLILEKLKIITYRNLFKKVNSLSSASSRYLLLKTHQLSLDAFLVALKFMQVEDVDIAEVQCILANLIYMGHIKGYISHQHQKLVVS
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain

phrase: VTYRYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMVLIYLLPVKMLLGHMPTIELLRKYHLMQFAEVTRAVSEGNLLLLNEALAAHETFFIRCGIFLILEKLKIITYRNLFKKVNSLSSASSRYLLLKTHQLSLDAFLVALKFMQVEDVDIAEVQCILANLIYMGHIKGYISHQHQKLVVSKQN
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain
Protein sequence:
MIGRIAGVLLEKNPPHLLIDCNGVGYEVDVPMSTFYNLPGTGEKVVLLTQMIVREDAHLLYGFLTPQERSTFRELLKITGIGARMALAVLSGMSVQELSQTVTMQDAARLTRVPGIGKKTAERLLLELKGKLGADLGAMAGAASQSDHASDILNALLALGYSEKEGLAAIKNVPAGTGVSEGIKLALKALSKA

Annotated regions:
phrase: DHASDILNALLALGYSEKEGLAAIKNVPAGTGVSEGIKLALKAL
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal

phrase: ARLTRVPGIGKKTAERLLL
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: RELLKITGIGARMALAVLS
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: MIGRIAGVLLEKNPPHLLIDCNGVGYEVDVPMSTFYNLPGTGEKVVLLTQMIVREDAHLLY
type: DOMAIN
name: DNA_helicase_Holl-junc_RuvA_I
description: DNA helicase, Holliday junction RuvA type, domain I, bacterial

phrase: DHASDILNALLALGYSEKEGLAAIKNVPAGTGVSEGIKLAL
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal
Protein sequence:
MPRPPVVARTLPALRRALDDLRRRNATVALVPTMGALHDGHLSLVRLAKRRAAKVVVSVFVNPTQFAPHEDFGSYPRTWKADVAKLAAENVDLIWNPDVKTMYPEGFATRIGVDGPAIAGLEDRFRPHFFGGVATVVGKLFLQVRPDVAIFGSKDFQQLRVVTRMAADLDLGVKVIGAPTIRERDGLAMSSRNVYLTPEQRQVAPTLYRAMKETAKLLKAGRSAEAALAAGAKMITDAGFALDYLEARHAESLAPVGSIKDGPIRLLVAAKLGNTRLIDNVAV

Annotated regions:
Protein sequence:
MNPWIPREYKYAFENLIMKEIILATSNAGKIKELSDLLAPIECIPQSGLGISDAEENGYSFIENALIKARHASLHSKRPALADDSGLVVPALNGEPGIYSARYAGKNATDAENIQLLLEKMSGVPYDQREAWFYCAIALVKHATDPMPIIATGMCHGIIHSQSLGEGGFGYDPIFYIPEFECTVAQLPAKIKNNISHRAQALKQLRDLIKN

Annotated regions:
Protein sequence:
MTLHSNSTTSPLFPNISSSWVHSPSEAGLPLGTVSQLDSYNISQTSGNFSSNDTSSDPLGGHTIWQVVFIAFLTGFLALVTIIGNILVIVAFKVNKQLKTVNNYFLLSLACADLIIGVISMNLFTTYIIMNRWALGNLACDLWLSIDYVASNASVMNLLVISFDRYFSITRPLTYRAKRTTKRAGVMIGLAWVISFVLWAPAILFWQYFVGKRTVPPGECFIQFLSEPTITFGTAIAAFYMPVTIMTILYWRIYKETEKRTKELAGLQASGTEAEAENFVHPTGSSRSCSSYELQQQGTKRSSRRKYGGCHFWFTTKSWKPSAEQMDQDHSSSDSWNNNDAAASLENSASSDEEDIGSETRAIYSIVLKLPGHSTILNSTKLPSSDNLQVPDKDLGTMDVERNAHKLQAQKSMDDRDNCQKDFSKLPIQLESAVDTAKTSDTNSSVDKTTAALPLSFKEATLAKRFALKTRSQITKRKRMSLIKEKKAAQTLSAILLAFIITWTPYNIMVLVNTFCDSCIPKTYWNLGYWLCYINSTVNPVCYALCNKTFRTTFKMLLLCQCDKRKRRKQQYQQRQSVIFHKRVPEQAL

Annotated regions:
phrase: GNILVIVAFKVNKQLKTVNNYFLLSLACADLIIGVISMNLFTTYIIMNRWALGNLACDLWLSIDYVASNASVMNLLVISFDRYFSITRPLTYRAKRTTKRAGVMIGLAWVISFVLWAPAILFWQYFVGKRTVPPGECFIQFLSEPTITFGTAIAAFYMPVTIMTILYWRIYKETEKRTKELAGLQASGTEAEAENFVHPTGSSRSCSSYELQQQGTKRSSRRKYGGCHFWFTTKSWKPSAEQMDQDHSSSDSWNNNDAAASLENSASSDEEDIGSETRAIYSIVLKLPGHSTILNSTKLPSSDNLQVPDKDLGTMDVERNAHKLQAQKSMDDRDNCQKDFSKLPIQLESAVDTAKTSDTNSSVDKTTAALPLSFKEATLAKRFALKTRSQITKRKRMSLIKEKKAAQTLSAILLAFIITWTPYNIMVLVNTFCDSCIPKTYWNLGYWLCYINSTVNPVC
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM
Protein sequence:
MKKIIICFIFVFSINVSFADATSELIDKIKNIHSMTANFNQKLIDGQTNNNLNSKGNMSLKKPQYFKWITTSPNHQEIVYNGTKLWIYDGDLDQLIIKKVSNDIAQFPYLILLSKNTNNINKLFTVTAQDNNSYILKPKNDQMIDSIKIKFTPNNQLEYLEISTSLNQFTKIEFNNVKTDVDISNTSFDFKAPQNTDIIDETKSA

Annotated regions:
Protein sequence:
MSQEPTTYSLFLFLFLSHGVSSYTVPNSRQDLHPLLQNMAEEIIDGSYLNALLDLIQFQSSHVWTDDLSHRVLAYLNSRNVAFTIPSLQAAVENHLEQRLHQPQKLLEDLRKTDAQQFRTAMKCLLEDKKDGLDLKDIIIDLGEIRERALQSPGVNRSLFLITLERCFQMLNSLECVEILGKVLRGSSGSFLQPDITERLPRDLREDAFKNLSAVFKDLYDKTSAHSQRALYSWMTGILQTSSNATDDSASWVSAEHLWVLGRYMVHLSFEEITKISPIEIGLFISYDNATKQLDMVYDITPELAQAFLERISSSNFNMRNTSTIHRQAHELWALEPFPKMLGLLVCFYNDLELLDATVAQVLLYQMIKCSHLRGFQAGVQKLKAELLDIAMENQTLNETLGSLSDAVVGLTYSQLESLSPEAVHGAISTLNQVSGWAKSQVIILSAKYLAHEKVLSFYNVSQMGALLAGVSTQAFCSMKRKDISQVLRSAVSQYVSDLSPAQQQGILSKMVQAEDTAPGIVEIQGAFFKEVSLFDLRRQPGFNSTVLKDKELGRSQALFLYELLLKTTRRPEELLSAGQLVKGVTCSHIDAMSTDFFLAHFQDFQNNFALLSPYQVNCLAWKYWEVSRLSMPPFLLAALPARYLASVPASQCVPFLISLGKSWLDSLVLDSHKKTSVLRKVQQCLDDSIADEYTVDIMGNLLCHLPAAIIDRGISPRAWATALHGLRDCPDLNPEQKAAVRLKLLGQYGLPQHWTAETTKDLGPFLVLFSGDELSSIATKFPEILLQAASKMARTLPTKEFLWAVFQSVRNSSDKIPSYDPMPGCHGVVAPSSDDIFKLAEANACWALEDLRCMEEDTFIRTVELLGAVQGFSRPQLMTLKEKAIQVWDMPSYWREHHIVSLGRIALALNESELEQLDLSSIDTVASLSWQTEWTPGQAESILQGYLDDSGYSIQDLKSFHLVGLGATLCAINITEIPLIKISEFRVVVARIGTLLCSTHVLAEFKRKAEVVFGDPTEWTSSVLQELGTIAAGLTKAELRMLDKDLMPYFQPSAIKCLPDEIFKELSAEQIASLGPENAAAVTHAQRRRLSPLQLQSLQQALDGAKTHSWQDAPASAGPTRTSSSRSPAGALQSWGLWLGCPLLVLMAKLLW

Annotated regions:
Protein sequence:
MARIAGINIPDQKHTVIALTAIFGIGRTRARAICAATAIAETAKIKELSEAQIDTLREEVAKYLVEGDLRREISMNIKRLMDLGCYRGLRHRRSLPLRGQRTKTNARTRKGPRKPIRK

Annotated regions:
phrase: RGLRHRRSLPLRG
type: CONSERVED_SITE
name: Ribosomal_uS13_CS
description: Small ribosomal subunit protein uS13, conserved site
Protein sequence:
MASPMKSDFLAGSHMKLPKIGIAAAVAVVASIVIYLALSSFFVGTDEFKNDENQSIKEYPDNTRFMRFTHGKQLSKAGEDLAGSEPYLVRNGKSKELVIFAPEHLQEFHRKDANSHYKPENMNMGDYAGQLLGQCVGQLGGTKWKLARSHMDPEFSYRASRSMMKRFSQEIDSWVSHLSENPTRRSTQKDVFVQDVKKRCKDLSLRSIAISIYGETFSEENYAFLSTMNELHEKIIFVAFLNKRVMSKWYNKLPTAEKRLMDSFQTQWKAFNLAQIKLAREKKLSCPAEKIYVGVEAGDMSLPEFLQSLDEMLFTNIDITGSILALIFQHLAKDQAMQKKLRAEISAHRAQPGYTVGDYISKQNTLLHFSLLESIRVTPAMYFTLPECNASPKRIGGFHIPAHTPTIVDVNRLNKNESIWGTEADAFRPERFFGLDPARYRFGFVRWGIGRDKCLGKNMAEVILKLAILAVTDKYTLHVPPALPGQGEKSEAGFTINRDVEVEFRPAI

Annotated regions:
Protein sequence:
MSSGGLLLLLGLLTLWAELTPISGQDRPKKPGLRPPRPQKPPCVRECKNDWRCPGEQKCCRYGCIYECRDPIFVK

Annotated regions:
phrase: PGLRPPRPQKPPCVRECKNDWRCPGEQKCCRYGCIYECRD
type: DOMAIN
name: WAP_dom
description: WAP-type 'four-disulfide core' domain

phrase: KPGLRPPRPQKPPCVRECKNDWRCPGEQKCCRYGCIYECRDP
type: DOMAIN
name: WAP_dom
description: WAP-type 'four-disulfide core' domain

phrase: RPKKPGLRPPRPQKPPCVRECKNDWRCPGEQKCCRYGCIYECRDP
type: DOMAIN
name: WAP_dom
description: WAP-type 'four-disulfide core' domain
Protein sequence:
MREIVHLQTGQCGNQIGAAFWQTISGEHGLDGSGVYNGTSDLQLERLNVYFNEASGNKYVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLDVVRREAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATFSVVPSPKVSDTVVEPYNATLSIHQLVENSDETFCIDNEALYDICMRTLKLTNPSYGDLNHLVSAVMSGVTTCLRFPGQLNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVTVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVSMKEVEDQMRNVQNKNSSYFVEWIPTNVQTALCSIPPRGLKMSSTFVGNSTSIQELFKRIGDQFTRMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDASISEGEEEYEEEAPMEPEE

Annotated regions:
phrase: EIVHLQTGQCGNQIGAAFWQTISGEHGLDGSGVYNGTSDLQLERLNVYFNEASGNKYVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLDVVRREAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATFSVVPSPKVSDTVVEPYNATLSIHQLVENSDETFCIDNEALYDI
type: DOMAIN
name: Tubulin_FtsZ_GTPase
description: Tubulin/FtsZ, GTPase domain

phrase: LNVYFNEASGNKYVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLDVVRREAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREEFPDRMMATFSVVPSPKVSDTVVEPYNATLSIHQLVENSDETFCIDNEALYDICMRTLKLTNPSYGDLNHLVSAVMSGVTTCLRFP
type: DOMAIN
name: Tubulin_FtsZ_GTPase
description: Tubulin/FtsZ, GTPase domain

phrase: GGGTGA
type: CONSERVED_SITE
name: Tubulin_CS
description: Tubulin, conserved site

phrase: PRLHFFMVGFAPLTSRGAHSFRAVTVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVSMKEVEDQMRNVQNKNSSYFVEWIPTNVQTALCSIPPRGLKMSSTFVGNSTSIQELFKR
type: DOMAIN
name: Tubulin/FtsZ_2-layer-sand-dom
description: Tubulin/FtsZ, 2-layer sandwich domain

phrase: MRE
type: BINDING_SITE
name: Beta-tubulin_BS
description: Beta tubulin, autoregulation binding site

phrase: LNSDLRKLAVNMVPFPRLHFFMVGFAPLTSRGAHSFRAVTVPELTQQMFDPKNMMAASDFRNGRYLTCSAIFRGKVSMKEVEDQMRNVQNKNSSYFVEWIPTNVQTALCSIPPRGLKMSSTFVGNSTSIQELFKRIG
type: DOMAIN
name: Tubulin/FtsZ_2-layer-sand-dom
description: Tubulin/FtsZ, 2-layer sandwich domain
Protein sequence:
MLDLKFIRENTELVRKAVAARNTDAPIDEILELDSCRRTLSQELDTLRAKRKIIAKQRDEAAIEEGRVLRGRISELETGLSEVEEKLTDRLLRVPNIPDASVPVGKDESENVVLYYRGEKRNFSFTPKPHWELGEALDIIDFDRGIKLSGSRFYILKGEGARLQRALIAFMLDLHTRKHGYTEIYPPYMIKRECLVASGNLPKFADNLYHDAEEDYWWVPTAEAPLTNLHRDEILSVEQLPIHYVAYTACFRREKMSAGKDVRGIKRLHQFDKVELYKYCKPEDSFDELEKMVADAEEIADALKIPYRLKQLVTADISFGSAKSYDIEMYSPGVDEWLEVSSCSNCTDFQGRRANVRFRRTPEAKPEFVHTLNGSGLALPRVMISVIENYQLPDGSIVVPEVLRPFMGVDAIC

Annotated regions:
phrase: MLDLKFIRENTELVRKAVAARNTDAPIDEILELDSCRRTLSQELDTLRAKRKIIAKQRDEAAIEEGRVLRGRISELETGLSEVEEKLTDRLLRVPNI
type: DOMAIN
name: Ser-tRNA-synth_1_N
description: Serine-tRNA synthetase, type1, N-terminal

phrase: ENVVLYYRGEKRNFSFTPKPHWELGEALDIIDFDRGIKLSGSRFYILKGEGARLQRALIAFMLDLHTRKHGYTEIYPPYMIKRECLVASGNLPKFADNLYHDAEEDYWWVPTAEAPLTNLHRDEILSVEQLPIHYVAYTACFRREKMSAGKDVRGIKRLHQFDKVELYKYCKPEDSFDELEKMVADAEEIADALKIPYRLKQLVTADISFGSAKSYDIEMYSPGVDEWLEVSSCSNCTDFQGRRANVRFRRTPEAKPEFVHTLNGSGLALPRVMISVIENYQLPDGSIVVPEVLRPF
type: DOMAIN
name: SerRS_core
description: Serine-tRNA ligase catalytic core domain

phrase: LKGEGARLQRALIAFMLDLHTRKHGYTEIYPPYMIKRECLVASGNLPKFADNLYHDAEEDYWWVPTAEAPLTNLHRDEILSVEQLPIHYVAYTACFRREKMSAGKDVRGIKRLHQFDKVELYKYCKPEDSFDELEKMVADAEEIADALKIPYRLKQLVTADISFGSAKSYDIEMYSPGVDEWLEVSSCSNCTDFQGRRANVRFRRTPEAKPEFVHTLNGSGLALPRVMISVIENYQLPDGSIVV
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: DAEEDYWWVPTAEAPLTNLHRDEILSVEQLPIHYVAYTACFRREKMSAGKDVRGIKRLHQFDKVELYKYCKPEDSFDELEKMVADAEEIADALKIPYRLKQLVTADISFGSAKSYDIEMYSPGVDEWLEVSSCSNCTDFQGRRANVRFRRTPEAKPEFVHTLNGSGLALPRVMISVIEN
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
Protein sequence:
MAATPNNIIPIVLATGNQDKIKELRPLLEGISPLFMVTTLKELGADITVEETEATLEGNALLKAKAIFKLLSDRFPYMIALADDTGLEVDALDGAPGVFSARYAPALDGNSPSYEENIHHLLHSLRGIEKRNACFRTVVALKGRVPSGEGSFEFEHTAEGAVSGSITFEQKGNEGFGYDPVFLVHSIGKTYAEMSIAQKNTLSHRALALHKAKVDLTLILNNNRIPLISTNELS

Annotated regions:
Protein sequence:
MKRNSINIHHVTSFSSSPFWCVFFLVLLCKTSTNALVKQPPNETTPAIIVFGDSIVDAGNNDDIMTTLARCNYPPYGIDFDGGIPTGRFCNGKVATDFIAGKFGIKPSIPAYRNPNLKPEDLLTGVTFASGGAGYVPFTTQLSTYLFIYKPLLFLKGGIALSQQLKLFEEYVEKMKKMVGEERTKLIIKNSLFMVICGSNDITNTYFGLPSVQQQYDVASFTTLMADNARSFAQKLHEYGARRIQVFGAPPVGCVPSQRTLAGGPTRNCVVRFNDATKLYNVKLAANLGSLSRTLGDKTIIYVDIYDSLLDIILDPRQYGFKVVDKGCCGTGLIEVALLCNNFAADVCPNRDEYVFWDSFHPTEKTYRIMATKYFERYV

Annotated regions:
phrase: IIVFGDSIVDA
type: ACTIVE_SITE
name: Lipase_GDSL_AS
description: Lipase, GDSL, active site
Protein sequence:
MEYRSLTLDDFLSRFQLLRPQINRETLNHRQAAVLIPIVRRPQPGLLLTQRSIHLRKHAGQVAFPGGAVDDTDASVIAAALREAEEEVAIPPSAVEVIGVLPPVDSVTGYQVTPVIGIIPPDLPYRASEDEVSAVFEMPLAQALHLGRYHPLDIYRRGDSHRVWLSWYEQYFVWGMTAGIIRELALQIGVKP

Annotated regions:
phrase: HRQAAVLIPIVRRPQPGLLLTQRSIHLRKHAGQVAFPGGAVDDTDASVIAAALREAEEEVAIPPSAVEVIGVLPPVDSVTGYQVTPVIGIIPPDLPYRASEDEVSAVFEMPLAQALHLGRYHPLDIYRRGD
type: DOMAIN
name: NUDIX_hydrolase_dom
description: NUDIX hydrolase domain

phrase: RQAAVLIPIVRRPQPGLLLTQRSIHLRKHAGQVAFPGGAVDDTDASVIAAALREAEEEVAIPPSAVEVIGVLPPVDSVTGYQVTPVIGIIPPDLPYRASEDEVSAVFEMPLAQ
type: DOMAIN
name: NUDIX_hydrolase_dom
description: NUDIX hydrolase domain

phrase: LLTQRSIHLRKHAGQVAFPG
type: CONSERVED_SITE
name: NUDIX_hydrolase_NudL_CS
description: NUDIX hydrolase, NudL, conserved site
Protein sequence:
MSAVLLLALLGFILPLPGVQALLCQFGTVQHVWKVSDLPRQWTPKNTSCDSGLGCQDTLMLIESGPQVSLVLSKGCTEAKDQEPRVTEHRMGPGLSLISYTFVCRQEDFCNNLVNSLPLWAPQPPADPGSLRCPVCLSMEGCLEGTTEEICPKGTTHCYDGLLRLRGGGIFSNLRVQGCMPQPGCNLLNGTQEIGPVGMTENCNRKDFLTCHRGTTIMTHGNLAQEPTDWTTSNTEMCEVGQVCQETLLLLDVGLTSTLVGTKGCSTVGAQNSQKTTIHSAPPGVLVASYTHFCSSDLCNSASSSSVLLNSLPPQAAPVPGDRQCPTCVQPLGTCSSGSPRMTCPRGATHCYDGYIHLSGGGLSTKMSIQGCVAQPSSFLLNHTRQIGIFSAREKRDVQPPASQHEGGGAEGLESLTWGVGLALAPALWWGVVCPSC

Annotated regions:
phrase: SLRCPVCLSMEGCLEGTTEEICPKGTTHCYDGLLRLRGGGIFSNLRVQGCMPQPGCNLLNGTQEIGPVGMTENCNRKD
type: DOMAIN
name: LY6_UPA_recep-like
description: Ly-6 antigen/uPA receptor-like

phrase: NTEMCEVGQVCQETLLLLDVGLTSTLVGTKGCSTVGAQNSQKTTIHSAPPGVLVASYTHFCSSDLCNS
type: DOMAIN
name: LY6_UPA_recep-like
description: Ly-6 antigen/uPA receptor-like

phrase: SCDSGLGCQDTLMLIESGPQVSLVLSKGCTEAKDQEPRVTEHRMGPGLSLISYTFVCRQEDFCN
type: DOMAIN
name: LY6_UPA_recep-like
description: Ly-6 antigen/uPA receptor-like

phrase: DRQCPTCVQPLGTCSSGSPRMTCPRGATHCYDGYIHLSGGGLSTKMSIQGCVAQPSSFLLNHTRQIGIFSARE
type: DOMAIN
name: LY6_UPA_recep-like
description: Ly-6 antigen/uPA receptor-like