nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MADWNAEQYLKFEDERTRPARDLLAQVPTTAPRKVADIGCGPGNSTALLVERWPEASVIGVDTSADMLRQARERLPQHKFIEANVAHWAPPAGTDVLFANAVFQWVPDHLKQLRRLLSGLDSGGVLAVQMPDNLDEPSHIMMREVALQEPWRHQLSKAAELRDTLPKPSVYYDALKPLCSRLEIWHTVYNHALDGPEAIVEWVKGTGLRPFIDPLELPERKTYLAAYTARIAAAYPAQADGQVLLRFPRIFIVAVK

Annotated regions:
phrase: VADIGCGPGNSTALLVERWPEASVIGVDTSADMLRQARERLPQHKFIEANVAHWAPPAGTDVLFANAVFQWVPDHLKQLRRLLSGLDSG
type: DOMAIN
name: Methyltransf_25
description: Methyltransferase domain 25
Protein sequence:
MNSKKHLGHTARKRFGQNFLHDTSVIQGIVAAIYPQPNQFLVEIGPGLGALTEPVGELVDHLTVVELDRDLAERLRHHPFLHQKLTVIETDAMQFDFDELYTTENLAEKGQKLRVFGNLPYNISTPLMFHLFKYHDVIQDMHFMLQKEVVKRLCAGPNSKAYGRLTIMAQYFCQVMPVLEVPPSAFKPAPKVDSAVVRLIPHKELPHPVKDLYWLNRVCSQAFNQRRKTLRNALSTLFSPENLTALGIDLNARAENLAIADYARLANWLADNPPADVNNDEILDSEE

Annotated regions:
phrase: LVEIGPGLGALTEPVGELVDHLTVVEL
type: CONSERVED_SITE
name: rRNA_Ade_Mease_Trfase_CS
description: Ribosomal RNA adenine methylase transferase, conserved site

phrase: VIQGIVAAIYPQPNQFLVEIGPGLGALTEPVGELVDHLTVVELDRDLAERLRHHPFLHQKLTVIETDAMQFDFDELYTTENLAEKGQKLRVFGNLPYNISTPLMFHLFKYHDVIQDMHFMLQKEVVKRLCAGPNSKAYGRLTIMAQYFCQVMPVLEVPPSAFKPAPKVDSAVVRLIPH
type: DOMAIN
name: rRNA_Ade_methylase_Trfase_N
description: Ribosomal RNA adenine methylase transferase, N-terminal
Protein sequence:
MGQELSQHERYVEQLKQALKTRGVKVKYADLLKFFDFVKDTCPWFPQEGTIDIKRWRRVGDCFQDYYNTFGPEKVPVTAFSYWNLIKELIDKKEVNPQVMAAVAQTEEILKTSSHTELTTKPSQNPDLDLISLDSDDEGAKGSSLKDKNLSCTKKPKRFPVLLTAQTSADPEDPNPSEVDWDGLEDEAAKYHNPDWPPFLTRPPPYNKATPSAPTVMAVVNPKEELKEKIAQLEEQIKLEELHQALISKLQKLKTGNETVTSPETAGGFSRTPHWPGQHIPKGKCCASREKEEQTPKDIFPVTETVDGQGQAWRHHNGFDFTVIKELKTAASQYGATAPYTLAIVESVADNWLTPTDWNTLVRAVLSGGDHLLWKSEFFENCRETAKRNQQAGNGWDFDMLTGSGNYSSTDAQMQYDPGLFAQIQAAATKAWRKLPVKGDPGASLTGVKQGPDEPFADFVHRLITTAGRIFGSAEAGVDYVKQLAYENANPACQAAIRPYRKKTDLTGYIRLCSDIGPSYQQGLAMAAAFSGQTVKDFLNNKNKEKGGCCFKCGRKGHFAKNCHEHIHNNSETKAPGLCPRCKRGKHWANECKSKTDSQGNPLPPHQGNGLRGQPQAPKQAYGAVSFVPANKNNPFQSLPEPPQEVQDWTSVPPPTQY

Annotated regions:
phrase: SLTGVKQGPDEPFADFVHRLITTAGRIFGSAEAGVDYVKQLAYENANPACQAAIRPYRKKTDLTGYI
type: DOMAIN
name: Gag_p24_C
description: Retroviral nucleocapsid Gag protein p24, C-terminal domain

phrase: CFKCGRKGHFAKN
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: HERYVEQLKQALKTRGVKVKYADLLKFFDFVKDTCPWFPQEGTIDIKRWRRVGDCFQDYYNTFGPEKVPVTAFSYWNLIKELI
type: DOMAIN
name: B_retro_matrix
description: Beta-retroviral matrix protein

phrase: MGQELSQHERYVEQLKQALKTRGVKVKYADLLKFFDFVKDTCPWFPQEGTIDIKRWRRVGDCFQDYYNTFGPEKVPVTAFSYWNLIKELIDKKEVNPQVMAAVAQTEEILKTSSHTELTTKPSQNPDLDLISLDSDDEGAKGSSLKDKNLSCTKKPKRFPVLLTAQTSADPEDPNPSEVDWDGLEDEAAKYHNPDWPPFLTRPPPYNKATPSAPTVMAVVNPKEELKEKIAQLEEQIKLEELHQALISKLQKLKTGNETVTSPETAGGFSRTPHWPGQHIPKGKCCASREKEEQTPKDIFPVTETVDGQGQAWRHHNGFDFTVIKELKTAASQYGATAPYTLAIVESVADNWLTPTDWNTLVRAVLSGGDHLLWKSEFFENCRETAKRNQQAGNGWDFDMLTGSGNYSSTDAQMQYDPGLFAQIQAAATKAWRKLPVKGDPGASLTGVKQGPDEPFADFVHRLITTAGRIFGSAEAGVDYVKQLAYENANPACQAAIRPYRKKTDLTGYIRLCSDIGPSYQQGLAMAAAFSGQTVKDFLNNKNKEKGGCCFKCGRKGHFAKNCHEHIHNNSETKAPGLCPRCKRGKHWANECKSKTDSQGNPLPPHQGNGLRGQPQAPKQAYGAVSFVPANKNNPFQ
type: DOMAIN
name: Primate_lentivir_Gag_pol-like
description: Primate lentivirus group Gag polyprotein-like

phrase: LCPRCKRGKHWANECK
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: CCFKCGRKGHFAKNCH
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type
Protein sequence:
MIRYALLRSGRRTLQTRPSPQTLEELARLKSLEDVDSSVIRKLINQRTEEVNAQNEAQMLKKLSAEGRDLQNVPGSRYARPLWLLLIGCASVYLVRDWLRMKAEYDARETTLETRVEGLEAELKYLLEPKPGVLEVEVVQTEVASSAPWYKRWLWSGSR

Annotated regions:
Protein sequence:
MKNNYTSLKSPLDEEDELKTDHEIDLEKGLLPEYNSEEEGTLPLYSDISKLANPVPEDSSTGPTEIANPNVERRQEFKDSHPNIYFLLRLLISVLAVSVVFFTAWVCVNPLEKSIFGKVAFSVTIGITCPILFIATFCFFETWTQAVAQCIKVTVIFLAQCVKVTVIFLAQCVKVTAVFLAKCVKVIAVGLYNSKKDLVVTIWLAWVVICFILFGCVKDGRLNLNKALICSTCSISAALFFILLLVCIPIWTLKHMLFGLFQVLGVQSCVVIVTKGLMYLFDKHIDATGYEIEASSLFVIGNFLFFYEMECPGALKRMPKFIRNGIASFLEGIGNAFGGIGNAIGRIGNAFRGANDNNNNIPLEETEAESEV

Annotated regions:
Protein sequence:
MVDWVSGVNGKPLKWSQLEGVLSGTYPQEFKLANVGGSGSGSEKIRYYSSQPFAELHAASYYHFLHGANSPQDMVAAACQQGMSALALIDRDGFYGAMEFAEAAATSGLPTVFGAELTLAPDRILTVLARGVEGYTSLSRLITQARMRGSKDVTIYPPLAEIVESMGKNCRFLLNHSWCTDESLLEIFYPDTVVLEYGVTMRPEDVDHHELLDSIRQRYGFMAIASAVPSAVDRVSARVAGAKQALAQRESLPQATPRLHPMGSTWMRGGDELAGSVDKQLLDASVEVARDCAFALDLVAPNLPRWPVPDEMAHLTGLVNARFDARYRGRSEDVKNQARAQIHHELAVIKELGFPGYFLIVDDIVSFCHTNNILCQGRGSAANSVVCFVLGITNVEPISTGLLFERFLSRDREGPPDIDIDIESGRRDAVITYVYDTYGRDNAAQVANVITYRTKAALRDAARALGYPNTSADAWSTNPDEAPNAVRFLAEQLKGQPRHLGIHAGGMVICDRPIADVVPTEWARKHGRSVVQWDKESCASAGLVKFDLLGLGMLEALHHMIDLVVETTGTTINLWEIDLAEPEIYTMLSNGDAVGVFQVESRAQLATLPRLRPREFFDLVVEVALVRPGPIQGGSVHPYIRRRNGLEAVTYEHPILERSLRKTLGVPLFQEQLMHIAVDAAGFSGGEADELRRAMGSRRSVDTMNRMKRRFFAGLRRNNITGDIAGILWNKIVAFVAYGFPESHSQSFASLVYFSAWFKYHHPAEFYVGLLRAQPMGFYSPQSLLADARRKELTILSHNINKSQVEATVENGAIRLGLNMIKGVGKTEAEAIVAHAPYRDIADLSRRAGLGVAVIEALARSGALETLGVGRRQALWQAGAAATEKAAMLPGLSMVSAPSLPGMNAFELIVADIAMTGVSSENPVALLRRQLELRGVIPASELLNCENARRILLAGVVTHRQRPQTAAGVTFLGLEDETGLANVVVSVGLWKRSRAVKVARAVLVRGVVHNADGVASVTADRVEELPFAEMMSAGSRDFR

Annotated regions:
phrase: ELHAASYYHFLHGANSPQDMVAAACQQGMSALALIDRDGFYGAMEFAEAAATSGLPTVFGAELTLAPDRILTVLARGVEGYTSLSRLITQARMRG
type: DOMAIN
name: PHP_dom
description: PHP domain

phrase: LTILSHNINKSQVEATVENGAIRLGLNMIKGVGKTEAEAIVAHAPYRDIADLSRRAGLGVAVIEALARSGALETLGVGRRQ
type: DOMAIN
name: DNAPol_HHH
description: DNA polymerase, helix-hairpin-helix motif

phrase: AELHAASYYHFLHGANSPQDMVAAACQQGMSALALIDRDGFYGAMEFAEAAATSGLPTVFGAELTLA
type: DOMAIN
name: Pol/His_phosphatase_N
description: Polymerase/histidinol phosphatase, N-terminal

phrase: MLEALHHMIDLVVETTGTTINLWEIDLAEPEIYTMLSNGDAVGVFQVESRAQLATLPRLRPREFFDLVVEVALVRPGPIQGGSVHPYIRRRNGLEAVTYEHPILERSLRKTLGVPLFQEQLMHIAVDAAGFSGGEADELRRAMGSRRSVDTMNRMKRRFFAGLRRN
type: DOMAIN
name: DNA_pol3_finger
description: DNA polymerase III alpha subunit finger domain

phrase: HLTGLVNARFDARYRGRSEDVKNQARAQIHHELAVIKELGFPGYFLIVDDIVSFCHTNNILCQGRGSAANSVVCFVLGITNVEPISTGLLFERFLSRDREGPPDIDIDIESGRRDAVITYVYDTYGRDNAAQVANVITYRTKAALRDAARALGYPNTSADAWSTNPDEAPNAVRFLAEQLKGQPRHLGIHAGGMVICDRPIADVVPTEWARKHGRSVVQWDKESCASAGLVKFDLL
type: DOMAIN
name: DNA_pol3_alpha_NTPase_dom
description: Bacterial DNA polymerase III, alpha subunit, NTPase domain
Protein sequence:
VSTITFDVGSATISKYTTFLESLRNQAKDPSLKCYGIPMLPNTNPNPKYLLVELNAKLSSGEVKSITLMLRRHNLYVMGYSDPYDNKCRYHIFKDISSTTERKDVETTLCPNASSRVSKNISYDSSYPALENKAGRSRSQVQLGIQILNSDIGKISGVKSFTDKTEAEFLLVAIQMVSEATRFKYIENQVKTNFNRAFYPNAKVLNLEETWGKISMAIHGAKNGAFSKPLELQNADGSKWIVLRVDEIKPDVALLKYVSGSCQAT

Annotated regions:
phrase: IQMVSEATRFKYIENQ
type: CONSERVED_SITE
name: Ribosome_inactivat_prot_CS
description: Ribosome-inactivating protein conserved site
Protein sequence:
MSGDILVGEYLFKRLEQLGVKSILGVPGDFNLALLDLIEKVGDEKFRWVGNTNELNGAYAADGYARVNGLSAIVTTFGVGELSAINGVAGSYAEHVPVVHIVGMPSTKVQDTGALLHHTLGDGDFRTFMDMFKKVSAYSIMIDNGNDAAEKIDEALSICYKKARPVYIGIPSDAGYFKASSSNLGKRLKLEEDTNDPAVEQEVINHISEMVVNAKKPVILIDACAVRHRVVPEVHELIKLTHFPTYVTPMGKSAIDETSQFFDGVYVGSISDPEVKDRIESTDLLLSIGALKSDFNTGSFSYHLSQKNAVEFHSDHMRIRYALYPNVAMKYILRKLLKVLDASMCHSKAAPTIGYNIKPKHAEGYSSNEITHCWFWPKFSEFLKPRDVLITETGTANFGVLDCRFPKDVTAISQVLWGSIGYSVGAMFGAVLAVHDSKEPDRRTILVVGDGSLQLTITEISTCIRHNLKPIIFIINNDGYTIERLIHGLHASYNEINTKWGYQQIPKFFGAAENHFRTYCVKTPTDVEKLFSDKEFANADVIQVVELVMPMLDAPRVLVEQAKLTSKINKQ

Annotated regions:
phrase: INHISEMVVNAKKPVILIDACAVRHRVVPEVHELIKLTHFPTYVTPMGKSAIDETSQFFDGVYVGSISDPEVKDRIESTDLLLSIGALKSDFNTGSFSYHLSQKNAVEFHSDHMRIRYALYPNVAMKYILRKL
type: DOMAIN
name: Thiamin_PyroP_enz_cen_dom
description: Thiamine pyrophosphate enzyme, central domain

phrase: VGEYLFKRLEQLGVKSILGVPGDFNLALLDLIEKVGDEKFRWVGNTNELNGAYAADGYARVNGLSAIVTTFGVGELSAINGVAGSYAEHVPVVHIVGMPSTKVQDTGA
type: DOMAIN
name: Thiamin_PyroP_enz_TPP-bd_dom
description: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain

phrase: ITHCWFWPKFSEFLKPRDVLITETGTANFGVLDCRFPKDVTAISQVLWGSIGYSVGAMFGAVLAVHDSKEPDRRTILVVGDGSLQLTITEISTCIRHNLKPIIFIINNDGYTIERLIHGLHASYNEINTKWGYQQIPKFFGAAENHFRTYCVKTPTDVEKLFSDKEFANADVIQVVELVMPMLDAPRVL
type: DOMAIN
name: TPP_PDC_IPDC
description: Pyruvate decarboxylase/indolepyruvate decarboxylase-like, PP-binding domain

phrase: EYLFKRLEQLGVKSILGVPGDFNLALLDLIEKVGDEKFRWVGNTNELNGAYAADGYARVNGLSAIVTTFGVGELSAINGVAGSYAEHVPVVHIVGMPSTKVQDTGALLHHTLGDGDFRTFMDMFKKVSAYSIMIDNGNDAAEKIDEALSICYKKARPVYIGIP
type: DOMAIN
name: TPP_PYR_PDC_IPDC-like
description: Pyruvate decarboxylase/indolepyruvate decarboxylase-like, pyrimidine-binding domain

phrase: FPKDVTAISQVLWGSIGYSVGAMFGAVLAVHDSKEPDRRTILVVGDGSLQLTITEISTCIRHNLKPIIFIINNDGYTIERLIHGLHASYNEINTKWGYQQIPKFFGAAENHFRTYCVKTPTDVEK
type: DOMAIN
name: TPP_enzyme_TPP-bd
description: Thiamine pyrophosphate enzyme, TPP-binding
Protein sequence:
MLAAIGPRRPRPFPGRARVGWGTGRGGYYARSARTRTPPLGTHLAMVLLPLRCLLWGCVLTAVHPDPHTTCRENQYLINSRCCDKCQPGEKLVNDCTEFTSTECLPCKKGEFLDTWNIERHCHQHKYCDPNQGLQVQREGTSETDTTCTCDEGLHCTSDACESCIQHTLCPPGLGVKQVATGVSDTICHPCPAGFFSNVSSASEKCHPWTRCETKGLVELQAGTNKTDAVCGFQDRIRALVVIPITMVVLLAVLLVSAYIRKVTKKPENKVLQPKAVSQDPVEDLEVLPVPLHPIAPVQETLHGCQPVTQEDGKESRISVQERV

Annotated regions:
phrase: CRENQYLINSRCCDKCQPGEKLVNDCTEFTSTE
type: DOMAIN
name: TNFR/NGFR_Cys_rich_reg
description: TNFR/NGFR cysteine-rich region

phrase: CPAGFFSNVSSASEKCHPWTRCETKGLVELQAGTNKTDAV
type: DOMAIN
name: TNFR/NGFR_Cys_rich_reg
description: TNFR/NGFR cysteine-rich region

phrase: CRENQYLINSRCCDKCQPGEKLVNDCTEFTSTE
type: DOMAIN
name: TNFR/NGFR_Cys_rich_reg
description: TNFR/NGFR cysteine-rich region

phrase: CDEGLHCTSDACESCIQHTLCPPGLGVKQVATGVSDTI
type: DOMAIN
name: TNFR/NGFR_Cys_rich_reg
description: TNFR/NGFR cysteine-rich region

phrase: CKKGEFLDTWNIERHCHQHKYCDPNQGLQVQREGTSETDTT
type: DOMAIN
name: TNFR/NGFR_Cys_rich_reg
description: TNFR/NGFR cysteine-rich region

phrase: PCPAGFFSNVSSASEKCHPWTRCETKGLVELQAGTNKTDAV
type: DOMAIN
name: TNFR/NGFR_Cys_rich_reg
description: TNFR/NGFR cysteine-rich region

phrase: CRENQYLINSRCCDKCQPGEKLVNDCTEFTSTECLPCKKGEFLDTWNIERHCHQHKYCDPNQGLQVQREGTSETDTTCTCDEGLHCTSDACESCIQHTLCPPGLGVKQVATGVSDTICHPCPAGFFSNVSSASEKCHPWTRCETKGLVELQAGTNKTDAV
type: DOMAIN
name: TNFRSF5_N
description: Tumour necrosis factor receptor 5, N-terminal

phrase: TCDEGLHCTSDACESCIQHTLCPPGLGVKQVATGVSDTI
type: DOMAIN
name: TNFR/NGFR_Cys_rich_reg
description: TNFR/NGFR cysteine-rich region

phrase: PCKKGEFLDTWNIERHCHQHKYCDPNQGLQVQREGTSETDTT
type: DOMAIN
name: TNFR/NGFR_Cys_rich_reg
description: TNFR/NGFR cysteine-rich region

phrase: TCRENQYLINSRCCDKCQPGEKLVNDCTEFTSTE
type: DOMAIN
name: TNFR/NGFR_Cys_rich_reg
description: TNFR/NGFR cysteine-rich region

phrase: CKKGEFLDTWNIERHCHQHKYCDPNQGLQVQREGTSETDTT
type: DOMAIN
name: TNFR/NGFR_Cys_rich_reg
description: TNFR/NGFR cysteine-rich region

phrase: CPAGFFSNVSSASEKCHPWTRCETKGLVELQAGTNKTDAV
type: DOMAIN
name: TNFR/NGFR_Cys_rich_reg
description: TNFR/NGFR cysteine-rich region
Protein sequence:
MAPWPHRNGSLALWSDAPTLDPSAANTSGLPGVPWAAALAGALLALATVGGNLLVIIAIARTPRLQTITNVFVTSLAAADLVVGLLVMPPGATLALTGHWPLGETGCELWTSVDVLCVTASIETLCALAVDRYLAVTNPLRYGTLVTKRRARAAVVLVWIVSAAVSFAPIMSQWWRVGADAEAQECHSNPRCCSFASNMPYALLSSSVSFYLPLLVMLFVYARVFVVAKRQRHLLRRELGRFSPEESPPSPSRSPSPATGGTPAAPDGVPPCGRRPARLLPLREHRALRTLGLIMGIFSLCWLPFFLANVLRALAGPSLVPSGVFIALNWLGYANSAFNPVIYCRSPDFRDAFRRLLCSYGGRGPEEPRAVTFPASPVEARQSPPLNRFDGYEGARPFPT

Annotated regions:
phrase: GNLLVIIAIARTPRLQTITNVFVTSLAAADLVVGLLVMPPGATLALTGHWPLGETGCELWTSVDVLCVTASIETLCALAVDRYLAVTNPLRYGTLVTKRRARAAVVLVWIVSAAVSFAPIMSQWWRVGADAEAQECHSNPRCCSFASNMPYALLSSSVSFYLPLLVMLFVYARVFVVAKRQRHLLRRELGRFSPEESPPSPSRSPSPATGGTPAAPDGVPPCGRRPARLLPLREHRALRTLGLIMGIFSLCWLPFFLANVLRALAGPSLVPSGVFIALNWLGYANSAFNPVI
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM
Protein sequence:
MPNMRRRVNSLAQECEKNTQMNQETANFSEFYRLLSNIAVGKQSLTFGQLGLGSVEQLLAVHSWLSSAPTSVRIKLKVFEAQLDTLPLFISQLSSYTPPSSKQGSFIQTLTEADPIEILGCQRLIFDDGRFVIDLYLNSPIASLKSMRLPTCDGSDDDKSPLFDLWTISQTNSNRVESGMEQEISQALLWQVAKVSQDSAPVYNFNLKQGKEIRQLCQKTGFSLISYRSQNEEMTPKLTSDLSSLDTQICLQERKALRHAQAQDSLYTPVGQASSETDSESDTFAIIGGGVASAHLALSLAQRNKTVRLFCNDSSLAQQASGNKQGAVYPLLTPDNGHLSHYYQQGYLFSRRRLQSLIKDGFKVGYDFCGVLQTGFDQRSSARLEKIITAQPWNKQIAHGVDRHESSNLAGIDIDKAGIFYPLGGWICPHEFTQAAFDKASQLSDVSAHFNTDIKRIEQREGKWYLHKTTVNTGGEQTFGPFNTLILANGQGLNQFNQSKQLAATGFRGQVSHIPARNELLKLNTVLCSHGYLTPQNDGVHCTGASYIKNPEHLDYSPSEQAENLEKVKQSYLGKAWTEDVDISDHSARVGVRMVTRDHAPMMGCAPDFDVISLNYQNHQHTKESIKYWRETPAPIHQGLFILGGLGSRGITSGPLAAEALAAQLCGEIIPLDNATLELLNPNRMWMRKLIKGKAL

Annotated regions:
phrase: FAIIGGGVASAHLALSLAQRNKTVRLFCNDSSLAQQASGNKQGAVYPLLTPDNGHLSHYYQQGYLFSRRRLQSLIKDGFKVGYDFCGVLQTGFDQRSSARLEKIITAQPWNKQIAHGVDRHESSNLAGIDIDKAGIFYPLGGWICPHEFTQAAFDKASQLSDVSAHFNTDIKRIEQREGKWYLHKTTVNTGGEQTFGPFNTLILANGQGLNQFNQSKQLAATGFRGQVSHIPARNELLKLNTVLCSHGYLTPQNDGVHCTGASYIKNPEHLDYSPSEQAENLEKVKQSYLGKAWTEDVDISDHSARVGVRMVTRDHAPMMGCAPDFDVISLNYQNHQHTKESIKYWRETPAPIHQGLFILGGLGSRGITSGPLAAEALAAQLCGEIIPLDNATLELLNPNRMWMRKLIK
type: DOMAIN
name: tRNA_S-uridine_synth_MnmC_C
description: tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC, C-terminal

phrase: AIIGGGVASAHLALSLAQRNKTVRLFCNDSSLAQQASGNKQGAVYPLLTPDNGHLSHYYQQGYLFSRRRLQSLIKDGFKVGYDFCGVLQTGFDQRSSARLEKIITAQPWNKQIAHGVDRHESSNLAGIDIDKAGIFYPLGGWICPHEFTQAAFDKASQLSDVSAHFNTDIKRIEQREGKWYLHKTTVNTGGEQTFGPFNTLILANGQGLNQFNQSKQLAATGFRGQVSHIPARNELLKLNTVLCSHGYLTPQNDGVHCTGASYIKNPEHLDYSPSEQAENLEKVKQSYLGKAWTEDVDISDHSARVGVRMVTRDHAPMMGCAPDFDVISLNYQNHQHTKESIKYWRETPAPIHQGLFILGGLGSRGITSGPLAAEALA
type: DOMAIN
name: FAD-dep_OxRdtase
description: FAD dependent oxidoreductase
Protein sequence:
MAQNFTKLNPQFENIIFEHDDNQMILNFGPQHPSSHGQLRLILELEGEKIIKATPEIGYLHRGCEKLGENMTYNEYMPTTDRLDYTSSTSNNYAYAYAVETLLNLEIPRRAQVIRTILLELNRMISHIFFISVHALDVGAMSVFLYAFKTREYGLDLMEDYCGARLTHNAIRIGGVPLDLPPNWLEGLKKFLGEMRECKKLIQGLLDKNRIWRMRLENVGVVTPKMAQSWGMSGIMLRGTGIAYDIRKEEPYELYKELDFDVPVGNYGDSYDRYCLYMLEIDESIRIIEQLIPMYAKTDTPIMAQNPHYISAPKEDIMTQNYALMQHFVLVAQGMRPPIGEVYAPTESPKGELGFFIHSEGEPYPHRLKIRAPSFYHIGALSDILVGQYLADAVTVIGSTNAVFGEVDR

Annotated regions:
phrase: DVGAMSVFLYAFKTREYGLDLMEDYCGARLTHNAIRIGGVPLDLPPNWLEGLKKFLGEMRECKKLIQGLLDKNRIWRMRLENVGVVTPKMAQSWGMSGIMLRGTGIAYDIRKEEPYELYKELDFDVPVGNYGDSYDRYCLYMLEIDESIRIIEQLIPMYAKTDTPIMAQNPHYISAPKEDIMTQNYALMQHFVLVAQGMRPPIGEVYAPTESPKGELGFFIHSEGEPYPHRLKIRAPSFYHIGALSDILVGQYLADAVTVIGSTNAVFGEVD
type: DOMAIN
name: NADH_Q_OxRdtase_suD
description: NADH-quinone oxidoreductase, subunit D
Protein sequence:
MDSDMDYERPNVETIKCVVVGDNAVGKTRLICARACNTTLTQYQLLATHVPTVWAIDQYRVCQEVLERSRDVVDEVSISLRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPNSLNHVKTMWYQEIKHFCPRTPVVLVGCQLDLRYADLEAVNRARRPLARPIKRGDILPPEKGREVAKELGIPYYETSVFDQFGIKDVFDNAIRAALISRRHLQFWKSHLKKVQKPLLQAPFLPPKAPPPVIKVPECPSAGTSDAACLLDNPLCADVLFVLHDEEHIFAHRIYLATSSSKFYDLFLMECEESPCWGGGAGEEVPCRDFQGRTQSLGSAEEGKEGPQRTPQADPGASSGQDLPESLALQMEASGSEGHALSGWSKGFVSMHREVRVNPISKRVGPVTVVRLDPSMQSGPFRTLLRFLYSGQLDEKEKDLLGLAQMAEVLEMFDLRMMVENIMNKEAFMNQEITKAFHVRKANRIKECLSKGTFSDVTFTLDDGAISAHKPLLICSCEWMAAMFGGSFVESANREVHLPNINKMSMQAVLEYLYTKQLSPNLDLDPLELIALANRFCLTHLVALVEQHAVQELTKAAVSGVSIDGEVLSYLELAQFHNANQLAAWCLHHICTNYNSVCSKFRKEIKSKSADNQEYFERHRWPPVWYLKEEDHYQRVKREREKEDLALNKHHSRRKWCFWHSSPAVA

Annotated regions:
phrase: ADVLFVLHDEEHIFAHRIYLATSSSKFYDLFLMECEESPCWGGGAGEEVPCRDFQGRTQSLGSAEEGKEGPQRTPQADPGASSGQDLPESLALQMEASGSEGHALSGWSKGFVSMHREVRVNPISKRVGPVTVVRLDPSMQSGPFRTLLRFLYSGQLDEK
type: DOMAIN
name: BTB/POZ_dom
description: BTB/POZ domain

phrase: SDVTFTLDDGAISAHKPLLICSCEWMAAMFGGSFVESANREVHLPNINKMSMQAVLEYLYTKQLSPNLDLDPLELIALANRFCLTHLVALVEQHAVQE
type: DOMAIN
name: BTB/POZ_dom
description: BTB/POZ domain

phrase: ADVLFVLHDEEHIFAHRIYLATSSSKFYDLFLMECEESPCWGGGAGEEVPCRDFQGRTQSLGSAEEGKEGPQRTPQADPGASSGQDLPESLALQMEASGSEGHALSGWSKGFVSMHREVRVNPISKRVGPVTVVRLDPSMQSGPFRTLLRFLYSGQLDEKEKDLLGLAQMAEVLEMFDLRMMVENIMNKE
type: DOMAIN
name: BTB/POZ_dom
description: BTB/POZ domain

phrase: KECLSKGTFSDVTFTLDDGAISAHKPLLICSCEWMAAMFGGSFVESANREVHLPNINKMSMQAVLEYLYTKQLSPNLDLDPLELIALANRFCLTHLVALVEQHAV
type: DOMAIN
name: BTB/POZ_dom
description: BTB/POZ domain

phrase: TIKCVVVGDNAVGKTRLICARACNTTLTQYQLLATHVPTVWAIDQYRVCQEVLERSRDVVDEVSISLRLWDTFGDHHKDRRFAYGRSDVVVLCFSIANPNSLNHVKTMWYQEIKHFCPRTPVVLVGCQLDLRYADL
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: SDVTFTLDDGAISAHKPLLICSCEWMAAMFGGSFVESANREVHLPNINKMSMQAVLEYLYTKQLSPN
type: DOMAIN
name: BTB/POZ_dom
description: BTB/POZ domain
Protein sequence:
MAMLLSALLHDVTSVSAQDDVLVQGLRADSRALQAGELFVARQGARVDGLMLAPDAVARGAVAVLAGHGDAEALRAALGVPVIVLSDLAHALGVLADRFYAAPSKTLRVIGITGTNGKTSISHFIAQALSLAGKRAGLIGTLGMGLWGELHTATHTTPDVLSVHAELARQRDLGAEYVVMEVSSHALDQGRVAGVRFRAAVFSNLTQDHLDYHADMLDYAQAKRRLFVELQPKAVIINMDDAFGRALLEQLQHRQVLWAYGLGETPWVARETNVLDVRRMHLDERGIKLTLHCPQGLAHLTSPLLGQFNVSNLLAALATLLELGMPLRDAIAALEHVEAPAGRMERFCVQDRPLCVVDYAHTPDALAQALSTLRAHLKPKSGAKLWLVFGCGGNRDVSKRPRMGLVAAELADRVIVTDDNPRDEDGEVIAQGILAGMAQQDHVLIERDRRRAIAFALTEAAPEDIILVAGKGHEDYQEIAGVRYPFSDRDTVRELLGEVSAC

Annotated regions:
phrase: VQGLRADSRALQAGELFVARQGARVDGLMLAPDAVARGAVAVLAGHGDAEALRAALGVPVIVLSDLAHALGVLADRF
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: GRMERFCVQDRPLCVVDYAHTPDALAQALSTLRAHLKPKSGAKLWLVFGCGGNRDVSKRPRMGLVAAELADRVIVTDDNPRDEDGEVIAQGILAGMAQQDHVLIERDRRRAIAFALTEAAPEDIILVAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: ITGTNGKTSISHFIAQALSLAGKRAGLIGTLGMGLWGELHTATHTTPDVLSVHAELARQRDLGAEYVVMEVSSHALDQGRVAGVRFRAAVFSNLTQDHLDYHADMLDYAQAKRRLFVELQPKAVIINMDDAFGRALLEQLQHRQVLWAYGLGETPWVARETNVLDVRRMHLDERGIKLTLHCPQGLAHLTSPLLGQFNVSNLLAALA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central
Protein sequence:
MRAVRVAVVGATGAVGREMLRILEERRFPVDELVPLASPRSAGRRVAFRGEELEVRPLSLEALRGVDLSLSAAGASVARSFVREAAAAGTTCIDKSSAFRMDPDVPLVIPEVNPEALEGSPRIVAVPNCTTIVALVAVAPLHRAAGLRRLVLSSYQAVSGAGRDGVAELVEQVEKLRGQEEELTRPDPAALPSGEVFGKTIAFNVLPRIDAFDEEGWTGEETKTMRESRKILGLPDLDVAATCVRVPVVVGHAVAVLAEFARPISPEEAREVLAAAPGVRVVDDPERGLYPSPLEAAGRDEVLVGRVRRAPGRDDALLLFSCGDNLRKGAALNGVQIAERLLLGRG

Annotated regions:
phrase: RVAVVGATGAVGREMLRILEERRFPVDELVPLASPRSAGRRVAFRGEELEVRPLSLEALRGVDLSLSAAGASVARSFVREAAAAGTTCIDKSSAFRMDPDVPLVIPEVNPEAL
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: VAATCVRVPVVVGH
type: CONSERVED_SITE
name: Asp-semialdehyde_DH_CS
description: Aspartate-semialdehyde dehydrogenase, conserved site

phrase: RVAVVGATGAVGREMLRILEERRFPVDELVPLASPRSAGRRVAFRGEELEVRPLSLEALRGVDLSLSAAGASVARSFVREAAAAGTTCIDKSSAFRMDPDVPLVIPEVNPEALEG
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: APLHRAAGLRRLVLSSYQAVSGAGRDGVAELVEQVEKLRGQEEELTRPDPAALPSGEVFGKTIAFNVLPRIDAFDEEGWTGEETKTMRESRKILGLPDLDVAATCVRVPVVVGHAVAVLAEFARPISPEEAREVLAAAPGVRVVDDPERGLYPSPLEAAGRDEVLVGRVRRAPGRDDALLLFSCGDNLR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain
Protein sequence:
MDESALLDLLECPVCLERLDATAKVLPCQHTFCRRCLLGIVGSRGELRCPECRTLVESGVDELPSNILLVRLLDGIKQRPRRTGSVHGTCANGSAVAGVRAQGAGGSQRDPGPTGGQSQRVQAKSTPVRGVPQLPCAKALYNYDGKEPGDLKFSKGDIIILRRQVDENWYHGEMGGVHGFFPTNFVQVIKPLPQPPPQCKALYDFELKDKEADKDCLPFSKDDILTVIRRVDENWAEGMLGDKIGIFPISYVEFNSAARQLIELDKPSEGGGDSSEGPSSSSSGPQANGSQKAPGEKKNSKKRHSFTSLTMSHKPCLAPPPQRHSMEISGPVLISSSNPTAAARIGELSGGLSSSAPSQVHICTTGLIVTPPPSSPVTTATVFTFPPETSYASIPVDALPPPPPPPPQSQSSVVGAAALNAGQRPSPAAGDQSGRQRPTVYVAMFPYSPRKEDELELRKGEMFLVLERCQDGWFKGTSMHTGKIGVFPGNYMSPVSRTVSGSSQPKVPLTLCSQAGRGVTIVSPSSALGSMDLSKPLPVCPNATPSCSLPAAVVTAAHLPTGQHPKVLMHVTSQMTVNQARNAVRTAVSHSQDRPTAAVTPIQSHNPVAYLPSTAVVLQASPVLNSSSGCSSARVGVALGCAAASLTPPNVSAASLDTDAMRPVPMVALPVNAGSTKPLGAASNHGVACRLDKDCKREKKGLLKLLSNKKKLRPSPPSSPTLEAEQSVSMELPQGAVGPEMALSGSAGHNGRIGACPMDSELSMSSSS

Annotated regions:
phrase: QCKALYDFELKDKEADKDCLPFSKDDILTVIRRVDENWAEGMLGDKIGIFPISY
type: DOMAIN
name: SH3RF1_SH3_2
description: E3 ubiquitin-protein ligase SH3RF1, second SH3 domain

phrase: QPPPQCKALYDFELKDKEADKDCLPFSKDDILTVIRRVDENWAEGMLGDKIGIFPISYVEFNS
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: CQHTFCRRC
type: CONSERVED_SITE
name: Znf_RING_CS
description: Zinc finger, RING-type, conserved site

phrase: CPVCLERLDATAKVLPCQHTFCRRCLLGIVGSRGELRC
type: DOMAIN
name: Znf-RING_euk
description: Zinc finger, RING-type, eukaryotic

phrase: TVYVAMFPYSPRKEDELELRKGEMFLVLERCQDGWFKGTSMHTGKIGVFPGNYMSPV
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: PQCKALYDFELKDKEADKDCLPFSKDDILTVIRRVDENWAEGMLGDKIGIFPISYVEFN
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: PCAKALYNYDGKEPGDLKFSKGDIIILRRQVDENWYHGEMGGVHGFFPTNFVQVI
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: PQLPCAKALYNYDGKEPGDLKFSKGDIIILRRQVDENWYHGEMGGVHGFFPTNFVQVIK
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: KIGVFPGNYMSP
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: DELELRKGEMFLVLE
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: PQCKALYDFE
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: QRPTVYVAMFPYSPRKEDELELRKGEMFLVLERCQDGWFKGTSMHTGKIGVFPGNYMSPVS
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: KALYNYDGKEPGDLKFSKGDIIILRRQVDENWYHGEMGGVHGFFP
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: KALYDFELKDKEADKDCLPFSKDDILTVIRRVDENWAEGMLGDKIGIF
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: AMFPYSPRKEDELELRKGEMFLVLERCQDGWFKGTSMHTGKIGVFPGN
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: CPVCLERLDATAKVLPCQHTFCRRCLLGIVGSRGELRCPEC
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: CPVCLERLDATAKVLPCQHTFCRRCLLGIVGSRGELRCPE
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type
Protein sequence:
MNCGDRVRRKAAHTCAQVFDVPERNSLRYRLHSLCGIVFWLPVSLLRALLLLLVCLYRRVRRAMAAKAWDSDCSEETGERIRNYHKQAFEFISEALHIDEDETGDKEQAVQWYKKGIAELQKGIHIQVTGAGEKADRARRLQDKMRSNLSMAKDRLELLGKLLSQSPAEGVSFSNGNLDSVSGTGAVAKKRETLTITNQNPQRTRNPPKTAPGLQRTSSANQSSRTGPQNNQRGNTGNRTNAKTSSTATSTPQRKTDMKNFKNVDSKLANLILNEIVDGGASVRFDDIAGQELAKQALQEIVILPALRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAMESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLLQFDGVQTGGDERVLVMGATNRPQELDEAVLRRFAKRIYVALPTEETRLKLLKNLLSKHRNPLSQKHLSQLARLTEGYSGSDLTSLAKDAALGPIRELKPEQVRNMAANEMREICFNDFLESLKRIKRSVSPQTLQLYTQWNGEYGDTTSV

Annotated regions:
phrase: IRNYHKQAFEFISEALHIDEDETGDKEQAVQWYKKGIAELQKGIHIQVTGAGEKADRARRLQDKMRSNLSMAKDRLE
type: DOMAIN
name: MIT_dom
description: MIT domain

phrase: LSQLARLTEGYSGSDLTSLAKDAALGPIRELKP
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: VLVMGATNRPQELDEAVLR
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: LLLFGPPGNGKTMLAKAVAMESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLLQFDGVQTGGDERVLVMGATNRPQELDEAVLRRFAKRIYV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: PARGLLLFGPPGNGKTMLAKAVAMESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLLCERREGEHDASRRLKTEFLLQFDGVQTGGDERVLVMGATNRPQELDEAVLRRFAKRIYVALP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: REICFNDFLESLKRIKRSVSPQTLQLYTQWNGEY
type: DOMAIN
name: Spast_Vps4_C
description: Spastin/Vps4, C-terminal
Protein sequence:
MIIVTGGAGFIGSNLVHELNRRGRTDVIVVDNLTRGEKALNLADCVIADYYDKDDFITLIEADEGLGPVEAVFHLGACSATTEWDGRYMMRNNFEYSRALFHWCQDRRIPFIYASSAAVYGGNSVFTEHPEHERPLNVYGYSKLAFDQYLRRYLDDLSAQVVGLRYFNVYGPREQHKGGMASVVHHFSRQLRESGQVRLFEGSDGYADGEQRRDFVDVSDCVRLKLWLLDHPEVSGIYNCGTGRARTFNAMAHAVIDWFGHGEIEYIPFPEHLKGRYQSYTQADLSQLRAAGCDLAFNDIETGVRNYLDAVADAPAVMPS

Annotated regions:
phrase: IIVTGGAGFIGSNLVHELNRRGRTDVIVVDNLTRGEKALNLADCVIADYYDKDDFITLIEADEGLGPVEAVFHLGACSATTEWDGRYMMRNNFEYSRALFHWCQDRRIPFIYASSAAVYGGNSVFTEHPEHERPLNVYGYSKLAFDQYLRRYLDDLSAQVVGLRYFNVYGPREQHKGGMASVVHHFSRQLRESGQVRLFEGSDGYADGEQRRDFVDVSDCVRLKLWLLDHPEVSGIYNC
type: DOMAIN
name: Epimerase_deHydtase
description: NAD-dependent epimerase/dehydratase
Protein sequence:
MGSKCSKSVGGWPAVRERMRRTQPEPAADGVGAASRDLERHGAITSSNTATTNADCAWVEAQEEGDEVGFPVRPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIYSQKRQDILDLWVYNTQGFFPDWHNYTPGPGVRYPLTFGWCFKLVPVEPEKVEEATAKENSCLLHPMNLHGMDDPEKEVLMWKFDSTLAFHHRARELHPEFYKDC

Annotated regions: