nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSMQDPIADMLTRIRNGQAANKVSVKMPSAKLKVAIAKLLKEEGYIADYAVADEAKPELEITLKYFQGQPVVETIQRVSRPGLRIYKGKNELPKVMGGLGVAIVSTSKGLMTDRAARLAGMGGEVICYVA

Annotated regions:
phrase: GVAIVSTSKGLMTDRAA
type: CONSERVED_SITE
name: Ribosomal_uS8_CS
description: Small ribosomal subunit protein uS8, conserved site
Protein sequence:
MAETPFHIPVLVNECLSWFSDRNPRSFCDVTVGAGGHAEAFLSTYPSIISYDGSDRDATALSLARERLEKFGDRVHLHHASFEDLAQDPKENVYDGILADLGVSSMQLDTLSRGFSFQGEDHDLDMRMDTSQGITASEVLNTLREEELGKIFREYGEEPHWKNVANAIVHFRRRKKIITVKDLKEATARVFPSYRLRKKIHPLTLIFQALRVYVNQEDVQLKVLLESAMRWLAPKGRLVIISFCSSEDRPVKWFFREAEKSGLGKILTKKVVMPTYEEIRRNPRCRSAKLRCFEKTS

Annotated regions:
Protein sequence:
MAKKRIAVIGAGASGLTCIKCCLEEGLEPVCFERSGDIGGLWRFQEAPEEGRASIYQSVVINTSKEMMCFSDYPIPDHYPNYMHNSQVLEYFRMYAKEFDLLKYIQFKTTVCSVKKQPDFSTSGQWQVVTECEGKQQVDVFDGVLVCTGHHTDAHLPLESFPGIEKFKGKYFHSRDYKNPVEFTGKRVIVIGIGNSGGDLAVEISHTAKQVFLSTRRGAWILNRVGKHGYPIDLLLSSRIMYYLSRICGPSLKNNYMEKQMNQRFDHEMFGLKPKHRALSQHPTVNDDLPNRIIAGLVKVKGNVKEFTETAAVFEDGSREDGIDVVIFATGYSFAFPFLEDSVKVVKNKVSLYKKVFPPNLEKPTLAIIGLIQPLGAIMPISELQGRWATQVFKGLKKLPSQSEMMAEINKAREEMAKRYVDSQRHTIQGDYIDTMEEIADLVGVRPNILPLVFTDPRLALRLLLGPCTPVQYRLQGPGKWAGARKTILTTEDRVRKPLMTRVVERDSSGGSLVTVRVLMLAVAFFAVILAYF

Annotated regions:
Protein sequence:
MIILGFESSCDETGVAAVSTERGLLAHALHTQIAMHQEYGGVVPELASRDHIRRAVPLARQVLAEAGLGLQDVDAVAYTAGPGLAGALLVGASVAQAFAWARGLPAIPIHHLEGHLLSPLLDDPRPDFPFVALLVSGGHTQLMRVDGVGRYALLGETLDDAAGEAFDKSAKLMGLGYPGGPALSRLAASGDPRRYALPRPMLHSGDLDFSFSGLKTAVLTRVKEAERDGGLDDAARADLAAATQAAIVEVLVAKAVRALKQTGLKRLVVAGGVGANQLLRELLAQALRPLGARAYFPPLALCTDNGAMIAFAAAERVKAGLASLQAGQHAFTVRPRWDLADICAGTPA

Annotated regions:
phrase: LLAHALHTQIAMHQEYGGVVPELASRDHIRRAVPLARQVLAEAGLGLQDVDAVAYTAGPGLAGALLVGASVAQAFAWARGLPAIPIHHLEGHLLSPLLDDPRPDFPFVALLVSGGHTQLMRVDGVGRYALLGETLDDAAGEAFDKSAKLMGLGYPGGPALSRLAASGDPRRYALPRPMLHSGDLDFSFSGLKTAVLTRVKEAERDGGLDDAARADLAAATQAAIVEVLVAKAVRALKQTGLKRLVVAGGVGANQLLRELLAQALRPLGARAYFPPLALCTDNGAMIA
type: DOMAIN
name: Gcp-like_dom
description: Gcp-like domain

phrase: MIILGFESSCDETGVAAVSTERGLLAHALHTQIAMHQEYGGVVPELASRDHIRRAVPLARQVLAEAGLGLQDVDAVAYTAGPGLAGALLVGASVAQAFAWARGLPAIPIHHLEGHLLSPLLDDPRPDFPFVALLVSGGHTQLMRVDGVGRYALLGETLDDAAGEAFDKSAKLMGLGYPGGPALSRLAASGDPRRYALPRPMLHSGDLDFSFSGLKTAVLTRVKEAERDGGLDDAARADLAAATQAAIVEVLVAKAVRALKQTGLKRLVVAGGVGANQLLRELLAQALRPLGARAYFPPLALCTDNGAMIAFAAAERVKAGLASLQAGQHAFTVRPRWDLA
type: DOMAIN
name: Gcp-like_dom
description: Gcp-like domain
Protein sequence:
MSKKRRNRHKKEAQEPQFDFDEAKELTVGQAIRKNEEVEAGVLPEDSILDKYVKQHRDEIEADKFATRQYKKEEFVETQSLDDLIQEMREAVEKSEASSEEVPSSEDILLPLPLDDEEQGLDPLLLDDENPTEMTEEVEEEQNLSRLDQEDSEKKSKKGFILTVLALVSVIICVSAYYVYRQVARSTKEIETSQSTTANQSDVDDFNTLYDAFYTNSNKTALKNSQFDKLSQLKTLLDKLEGSREHTLAKSKYDSLATQIKAIQDVNAQFEKPAIVDGVLDTNAKAKSDAKFTDIKTGNTELDKVLDKAISLGKSQQTSTSSSSSSQTSSSSSSQASSNTTSEPKPSSSNETRSSRSEVNMGLSSAGVAVQRSASRVAYNQSAIDDSNNSAWDFADGVLEQILATSRSRGYITGDQYILERVNIVNGNGYYNLYKPDGTYLFTLNCKTGYFVGNGAGHADDLDY

Annotated regions:
phrase: RVAYNQSAIDDSNNSAWDFADGVLEQILATSRSRGYITGDQYILERVNIVNGNGYYNLYKPDGTYLFTLNCKTGYFVG
type: DOMAIN
name: MapZ_C2
description: MapZ, extracellular C-terminal domain 2

phrase: KEIETSQSTTANQSDVDDFNTLYDAFYTNSNKTALKNSQFDKLSQLKTLLDKLEGSREHTLAKSKYDSLATQIKAIQDVNAQFEKPAIVDGVLDTNAKAKSDAKFTDIKTGNTELDKVLDKAI
type: DOMAIN
name: MapZ_EC1
description: MapZ, extracellular domain 1
Protein sequence:
MKILFSTIIGRPNVGKSTLLNNILEYDLAIVSSKPQATRDQIMGIYSDDDYQLIFTDTPGIYKTKTKFGENLNAQSYESLKDIDLVIFLSPANEEIGPGDEFICEKIKNFTNKIALITKIDLENSEEVLKKKAEKLKSLGFKEIFAISSKDHGSIKKLINEIKKYSYEGERQFDEDMITEKSEKFIAKESIREACIDLLEQELPHSILVEIDSFSEEEREEKNLVEIHSTIYVNKESQKGILIGKGGSKIKKIGISARKKIQRKLGVNVKLFLKIKVKKNWVNQEKIFKKFDN

Annotated regions:
phrase: ELPHSILVEIDSFSEEEREEKNLVEIHSTIYVNKESQKGILIGKGGSKIKKIGISARKKIQRKLGVNVKLFLKIKVKKN
type: DOMAIN
name: KH_dom_type_2
description: K Homology domain, type 2

phrase: TIIGRPNVGKSTLLNNILEYDLAIVSSKPQATRDQIMGIYSDDDYQLIFTDTPGIYKTKTKFGENLNAQSYESLKDIDLVIFLSPANEEIGPGDEFICEKIKNFTN
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: TIIGRPNVGKSTLLNNILEYDLAIVSSKPQATRDQIMGIYSDDDYQLIFTDTPGIYKTKTKFGENLNAQSYESLKDIDLVIFLSPANEEIGPGDEFICEKIKNFTNKIALITKIDLENSEEVLKKKAEKLKSLGFKEIFAISSKDHGSIKKLINEI
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: MKILFSTIIGRPNVGKSTLLNNILEYDLAIVSSKPQATRDQIMGIYSDDDYQLIFTDTPGIYKTKTKFGENLNAQSYESLKDIDLVIFLSPANEEIGPGDEFICEKIKNFTNKIALITKIDLENSEEVLKKKAEKLKSLGFKEIFAISSKDHGSIKKLINEIKK
type: DOMAIN
name: G_ERA_dom
description: Era-type guanine nucleotide-binding (G) domain

phrase: LEQELPHSILVEIDSFSEEEREEKNLVEIHSTIYVNKESQKGILIGKGGSKIKKIGISARKKIQRKLGVNVKLFLKIKVK
type: DOMAIN
name: KH_dom_type_2
description: K Homology domain, type 2

phrase: KILFSTIIGRPNVGKSTLLNNILEYDLAIVSSKPQATRDQIMGIYSDDDYQLIFTDTPGIYKTKTKFGENLNAQSYESLKDIDLVIFLSPANEEIGPGDEFICEKIKNFTNKIALITKIDLENSEEVLKKKAEKLKSLGFKEIFAISSKDHGSIKKLINEIKKYSY
type: DOMAIN
name: G_ERA_dom
description: Era-type guanine nucleotide-binding (G) domain
Protein sequence:
MAPASSVANGERESATKVSILGKESIIVDYGLWLNYVAKDLLHNVTTSTYVLICDTNLAKLDYVPDFTKSFNSERESIGKRPEDARLLIYDRIRPGETSKSRQTKAEVEDWLLQQGCTRDTVILALGGGVIGDMVGFVAATYMRGVRFCQIPTSLLAMVDSSIGGKTAIDTPLGKNLIGSFWQPERVYIDLQFLETLDKRQVCNGMAEVVKTAAIWDLEEFERLEEGADAIMAALDKPAGPGRFEGVEETFKRIVLGSARVKAEVVSADEREGGLRNILNFGHSIGHAYEALLTPEILHGESVAVGMVKEAELARYLGVLDPGAVARLTKAIASYDLPTSLHSKFITKHTSKQCQPDEVLLRMAVDKKNAGAQKKVTLLSSIGKCYEPRASKVTDKDLKMVLHPAVMVRPGVRKESNVQCKPPGSKSISNRVLLLAALGEGQCRISNLLHSDDTQFMLSAISKLGGASYSWEDAGNTLVVTGNGGKLQASKDEIYIGNAGTASRFLTTAVSLAQATDQAKSTVLTGNRRMQERPQGPLVDALRSNGVEIEYLKQGSQSLPLRIAAAGGFEGGAIELTAKVSSQYVSSILMCAPYAKNPVTLRLVGDKVISQPYIDMTIAMMASFGVHVTRSKTEPNVYHVPKQRYRNPGAYEVESDASSATYPLAVAAITGTTCTVPNIGSASLQGDARFAVDVLRPMGCEVRQTEHSTTVTGPAEGQLQALEEVDMEPMTDAFLTASVLAAVCRKTNAAGNRTTRIVGIANQRQKEC

Annotated regions:
phrase: IRPGETSKSRQTKAEVEDWLLQQGCTRDTVILALGGGVIGDMVGFVAATYMRGVRFCQIPTSLLAMVDSSIGGKTAIDTPLGKNLIGSFWQPERVYIDLQFLETLDKRQ
type: DOMAIN
name: DHQS/DOIS_N
description: 3-dehydroquinate synthase, N-terminal domain

phrase: CKPPGSKSISNRVLLLAALGEGQCRISNLLHSDDTQFMLSAISKLGGASYSWEDAGNTLVVTGNGGKLQASKDEIYIGNAGTASRFLTTAVSLAQATDQAKSTVLTGNRRMQERPQGPLVDALRSNGVEIEYLKQGSQSLPLRIAAAGGFEGGAIELTAKVSSQYVSSILMCAPYAKNPVTLRLVGDKVISQPYIDMTIAMMASFGVHVTRSKTEPNVYHVPKQRYRNPGAYEVESDASSATYPLAVAAITGTTCTVPNIGSASLQGDARFAVDVLRPMGCEVRQTEHSTTVTGPAEGQLQALEEVDMEPMTDAFLTASVLAAVCRKTNAAGNRTTRIVGIANQRQKE
type: DOMAIN
name: Enolpyruvate_Tfrase_dom
description: Enolpyruvate transferase domain

phrase: GMAEVVKTAAIWDLEEFERLEEGADAIMAALDKPAGPGRFEGVEETFKRIVLGSARVKAEVVSADEREGGLRNILNFGHSIGHAYEALLTPEILHGESVAVGMVKEAELARYLGVLDPGAVARLTKAIASYDLPTSLHSKFITKHTSKQCQPDEVLLRMAVDKK
type: DOMAIN
name: DHQS_C
description: 3-dehydroquinate synthase, C-terminal domain

phrase: IYIGNAGTASRFLT
type: CONSERVED_SITE
name: EPSP_synthase_CS
description: 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site
Protein sequence:
MLFHLRTLLNNAALRNGHNFVVRNFRCGQPLQDKVQLKGRDLLTLKNFTGEEIKYMLWLSADLKFRIKQKGEYLPLLQGKSLGMIFEKRSTRTRLSTETGFALLGGHPCFLTTDDIHLGVNESLTDTARVLSSMTDAVLARVYKQSDLDLLAKEASIPIVNGLSDLYHPIQILADYLTLQEHYGSLKGLTLSWIGDGNNILHSIMMSAAKFGMHLQVATPKGYEPDPSITKMAEQYAKENGTKLSLTNDPLEAACGGNVLITDTWISMGQEEEKKKRLQAFQGYQVTMKTAKVAAPDWTFLHCLPRKPEEVDDEVFYSPRSLVSPEAENRKWTIMAVMVSLLTDYSPQLQKPKF

Annotated regions:
phrase: KGLTLSWIGDGNNILHSIMMSAAKFGMHLQVATPKGYEPDPSITKMAEQYAKENGTKLSLTNDPLEAACGGNVLITDTWISMGQEEEKKKRLQAFQGYQVTMKTAKVAAPDWTFLHCLPRKPEEVDDEVFYSPRSLVSPEAENRKWTIMAVMV
type: DOMAIN
name: Asp_carbamoyltransf_Asp/Orn-bd
description: Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain

phrase: RDLLTLKNFTGEEIKYMLWLSADLKFRIKQKGEYLPLLQGKSLGMIFEKRSTRTRLSTETGFALLGGHPCFLTTDDIHLGVNESLTDTARVLSSMTDAVLARVYKQSDLDLLAKEASIPIVNGLSDLYHPIQILADYLTLQ
type: DOMAIN
name: Asp/Orn_carbamoyltranf_P-bd
description: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding
Protein sequence:
MCDDDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETAYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF

Annotated regions:
phrase: YVGDEAQSKR
type: CONSERVED_SITE
name: Actin_CS
description: Actin, conserved site

phrase: WITKQEYD
type: CONSERVED_SITE
name: Actin_CS
description: Actin, conserved site

phrase: LLTEAPLNPKAN
type: CONSERVED_SITE
name: Actin/actin-like_CS
description: Actin/actin-like conserved site
Protein sequence:
MAPMRVGVFGATGQVGQVMRALLEERDFPLDEVRFFSSAKSAGRTIPFKGKDVTVEDTATADLSGLDIALMSAGATMSREYAPKVAALGATVVDNSSAWRKDDDVPLVVSEVNPEDAINPPKGIIANPNCTTMAAMPVIKPLHDAAGLTRLTVATYQAVSGSGVKGVEALADQVAAIEDPRPLALDGSAVEAGDTAPYVAPIAYNVVAIAGSIVADGSGETDEEQKLRNESRKILHLPELLVSGTCVRVPVFSGHSLAVHAEFERDITPEQATELLANAPGVQLAEVPQPRVAAGADDVFVGRIRQDQGVPGKRGLVLFLSGDNLRKGAALNAIQVAEILAGRK

Annotated regions:
phrase: RVGVFGATGQVGQVMRALLEERDFPLDEVRFFSSAKSAGRTIPFKGKDVTVEDTATADLSGLDIALMSAGATMSREYAPKVAALGATVVDNSSAWRKDDDVPLVVSEVNPE
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: IKPLHDAAGLTRLTVATYQAVSGSGVKGVEALADQVAAIEDPRPLALDGSAVEAGDTAPYVAPIAYNVVAIAGSIVADGSGETDEEQKLRNESRKILHLPELLVSGTCVRVPVFSGHSLAVHAEFERDITPEQATELLANAPGVQLAEVPQPRVAAGADDVFVGRIRQDQGVPGKRGLVLFLSGDNLR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: VSGTCVRVPVFSGH
type: CONSERVED_SITE
name: Asp-semialdehyde_DH_CS
description: Aspartate-semialdehyde dehydrogenase, conserved site

phrase: RVGVFGATGQVGQVMRALLEERDFPLDEVRFFSSAKSAGRTIPFKGKDVTVEDTATADLSGLDIALMSAGATMSREYAPKVAALGATVVDNSSAWRKDDDVPLVVSEVNPEDAIN
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MEYLLQVKIAALVGLLFLTLIFGFIPARVKWFRDTDGTETHRTVLSLISCFAGGVFLSACFLDIIPDYLSDINTELHARQLETSFPLPEFIMAAGFFTVLILERIVLNCKEMRATHEERTTLIPERKSGHGHGHGDGPDPESSGHHVHVDFQAHSPFRSFMLFLSLSLHSIFEGLAIGLQTTDPKVVEICIAILVHKSIIVFSLAVKLVQSAIPPLWVAAYIGVFALMSPVGIAIGISVMEAQLAAGPLIQAILEGFAAGTFVYITFLEILPHELNSPGKQLLKVLFLLLGFSIMAALSFLG

Annotated regions:
Protein sequence:
MKRNIIFLVIHQFENLTMKKKQNIFFIFLLTVFFNFTVNSNVSAYPVFAQQGYKNPREANGRIVCANCHLAQKPVELEVPQAVLPDTVFEAMVKIPYDQQIKQVQANGKKGDLNVGMVLILPEGFELAPSDRLPEEMKKKVGNLYYQPYSSEQKNILVIGPIPGKLYNEMVVPLISPNPATNKNVNYLKYPIYLGGNRGRGQLYPDGSKSNNNLYNASATGKITEITPTGKKGGFDITIQTLNGETVIDKVPAGPELIVTKDQTIQVDQPLTNNPNVGGFGQAEAEIVLQNPARVQGLIIFLITIFITQLFLVLKKKQVEKVQLAEMNF

Annotated regions:
phrase: YPVFAQQGYKNPREANGRIVCANCHLAQKPVELEVPQAVLPDTVFEAMVKIPYDQQIKQVQANGKKGDLNVGMVLILPEGFELAPSDRLPEEMKKKVGNLYYQPYSSEQKNILVIGPIPGKLYNEMVVPLISPNPATNKNVNYLKYPIYLGGNR
type: DOMAIN
name: Cyt_f_lg_dom
description: Cytochrome f large domain
Protein sequence:
MNNFFDLQYEDLEDELRGLSQPGFRAKQIWQGVYQLQHSSWQDFTNIPKELRVFLESHYSLVSLNVLDETSALDQQSTKYLFSLSDGNFVESVILRNNDRITLCISTQSGCPVGCVFCATGKFGFFRDLTSGEIVEQVIHLSRLLSQQGEHITNIVLMGMGEPFLNFEATLDAVKRFNDNFGMNIGARRITISTIGIPDKILRFAQEGLQINLAVSLHAPNDALRRELVPVAARIHISELMQACRQYIKATNRRITFEYVLINGVNDQPQQAEELAALLSGMLCHVNLIGLNPTAHYPGRTPSHQTMNAFGHILLSHNIPTSIRNSQGSDIQAACGQLAGRMRK

Annotated regions:
phrase: NNFFDLQYEDLEDELRGLSQPGFRAKQIWQGVYQLQHSSWQDFTNIPKELRVFLESHYSLVSLNVLDETSALDQQSTKYLFSLSDGNFVESVILRNNDRITLCISTQSGCPVGCVFCATGKFGFFRDLTSGEIVEQVIHLSRLLSQQGEHITNIVLMGMGEPFLNFEATLDAVKRFNDNFGMNIGARRITISTIGIPDKILRFAQEGLQINLAVSLHAPNDALRRELVPVAARIHISELMQACRQYIKATNRRITFEYVLINGVNDQPQQAEELAALLSGMLCHVNLIGLNPTAHYPGRTPSHQTMNAFGHILLSHNIPTSIRNSQGSDIQAACGQLAGR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: NNDRITLCISTQSGCPVGCVFCATGKFGFFRDLTSGEIVEQVIHLSRLLSQQGEHITNIVLMGMGEPFLNFEATLDAVKRFNDNFGMNIGARRITISTIGIPDKILRFAQEGLQINLAVSLHAPNDALRRELVPVAARIHISELMQACRQYIKATNRRITFEYVLINGVNDQPQQAEELAALLSGMLCHVNLIGLNPTAHYPGRTPSHQTMNAFGHILLSHNIPTSI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: NFFDLQYEDLEDELRGLSQPGFRAKQIWQGVYQLQHSSWQDFTNIPKELRVFLES
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: ISTQSGCPVGCVFCATGKFGFFRDLTSGEIVEQVIHLSRLLSQQGEHITNIVLMGMGEPFLNFEATLDAVKRFNDNFGMNIGARRITISTIGIPDKILRFAQEGLQINLAVSLHAPNDALRRELVPVAARIHISELMQACRQYIKATNRRITFEYVLINGVNDQP
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MSIGDEVIPTVDISAWLSSTASPESKNKVVEEVRSACNKYGFFNLVGHGIPAEAREKIFGCTKKFFDLPLEEKMKISVDKSLGKSFRGYEPSLIQTHQDGLLPDTKECFITGAEIPADHPDAGKFSTGPNLWPEGLSDKEFRQPVMEYRALMLDLVSTIVRILGQGIHKAFGHPSDVLNDILINPSIPMRLLHYAPQENPDPRQFGVGDHTDFGCVSILLQQKGTKGLEVWYPPKETWIPVPVIEDAFVINMGDTMHRWTGGYYRSARHRVYITGERRYSVAFFLNGNLNLKIKPLDGSGGEASVGEHINSRLAHTLGDNAKYLR

Annotated regions:
phrase: IPTVDISAWLSSTASPESKNKVVEEVRSACNKYGFFNLVGHGIPAEAREKIFGCTKKFFDLPLEEKMKISVDKSLGKSFRGYEPSLIQTHQDGLLPDTKECFITGAEIPADHPDAGKFSTGPNLWP
type: DOMAIN
name: DIOX_N
description: Non-haem dioxygenase N-terminal domain

phrase: MRLLHYAPQENPDPRQFGVGDHTDFGCVSILLQQKGTKGLEVWYPPKETWIPVPVIEDAFVINMGDTMHRWTGGYYRSARHRVYITGERRYSVAFFL
type: DOMAIN
name: IPNS-like_FE2OG_OXY
description: Isopenicillin N synthase-like, Fe(2+) 2OG dioxygenase domain

phrase: PSIPMRLLHYAPQENPDPRQFGVGDHTDFGCVSILLQQKGTKGLEVWYPPKETWIPVPVIEDAFVINMGDTMHRWTGGYYRSARHRVYITGERRYSVAFFLN
type: DOMAIN
name: Oxoglu/Fe-dep_dioxygenase_dom
description: Oxoglutarate/iron-dependent dioxygenase domain
Protein sequence:
MVRKIFQTNAELKDWLSGQNSAIIFIPTMGGLHPGHQYLIQKAKEKKTNTNQIILVSIFVNPLQFSKGEDFKKYPRNIKRDAELAFSAGADAIWAPEYDEVFPGGADSHFKIEVPKTLHNQLCGAERKGHFDGVATVIIRLIKIIKPKKLILGEKDWQQLIIIRKLFQELSIPVKIESYSTQRDQSGFAYSSRNSYLSDSERVNAQSLPNAIKEAKTEFDKGKVINLTKIASIFKENNLKIEYLKIVDPFSLKETENINRLCLLAIAVKCGSTRLIDHTFLMHRKPIIAIDGPAGAGKSTVTKAFAKKLGFIYLDTGAMYRAVTWLIISNSIDPNDQAEIKNILKDSKLEFKNSSFVEQKIFINNIDVTEKIRSPQVTSMVSEIAKQQFVREVLTRKQQVIGNNGGLVAEGRDIGTAVFPDADLKIFLTASPTERAKRRALDLHKRGYEFSSIEDLEKEIKERDKKDSERKIAPLKKAQDAIELVTDGMNIEDVLKELIDIFRSKIPEEVWPTPNS

Annotated regions:
phrase: IAIDGPAGAGKSTVTKAFAKKLGFIYLDTGAMYRAVTWLIISNSIDPNDQAEIKNILKDSKLEFKNSSFVEQKIFINNIDVTEKIRSPQVTSMVSEIAKQQFVREVLTRKQQVIGNNGGLVAEGRDIGTAVFPDADLKIFLTASPTERAKRRALDLHKRGYEFSSIEDLEKEIKERDKKDSERKIAPLKKAQDAIELVTDGMNIEDVLKELIDIF
type: DOMAIN
name: Cytidylate_kinase_dom
description: Cytidylate kinase domain

phrase: IIAIDGPAGAGKSTVTKAFAKKLGFIYLDTGAMYRAVTWLIISNSIDPNDQAEIKNILKDSKLEFKNSSFVEQKIFINNIDVTEKIRSPQVTSMVSEIAKQQFVREVLTRKQQVIGNNGGLVAEGRDIGTAVFPDADLKIFLTASPTERAKRRALDLHKRGYEFSSIEDLEKEIKERDKKDSERKIAPLKKAQDAIELVT
type: DOMAIN
name: Cytidylate_kinase_dom
description: Cytidylate kinase domain
Protein sequence:
MKKLRDLLYKVSIDKVVGVTDVNVEKIVFDSRAVATDDVFVAIKGTASDGHEYIEKAIELGARAMVVEELPTDQNSDVTYVVVENSHKALALMAANFYENPSRDMKLVGVTGTNGKTTTTSLLYQLFKNLGYKTGLISTVEILIDGKSIATKHTTPDPMTINEHLDAMRGAGVDYCFMEVSSHGIAQERVTGLHFAGGIFTNLSHDHLDYHATFAEYRDVKKRFFDELPATAFAIYNKDDKNGPVMVQNTKAIKLGYALKTYTDYQAQILENQFGGLLLKVNGHELWTKMIGEFNAYNVLAIYACAMELGLTELEVLETISKLDGVAGRFQYFTTAKSHITAIIDYAHTPDALKNVLETINSIRTKNENLITVVGCGGDRDNTKRPIMANIATSLSDKVILTSDNPRTEDPLTILKEMESGVEPQNFKKSITIADREQAIKTAANMAGEKDIILIAGKGHETYQEINGIRHDFDDRLKITTILNQLEK

Annotated regions:
phrase: GRFQYFTTAKSHITAIIDYAHTPDALKNVLETINSIRTKNENLITVVGCGGDRDNTKRPIMANIATSLSDKVILTSDNPRTEDPLTILKEMESGVEPQNFKKSITIADREQAIKTAANMAGEKDIILIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: VTGTNGKTTTTSLLYQLFKNLGYKTGLISTVEILIDGKSIATKHTTPDPMTINEHLDAMRGAGVDYCFMEVSSHGIAQERVTGLHFAGGIFTNLSHDHLDYHATFAEYRDVKKRFFDELPATAFAIYNKDDKNGPVMVQNTKAIKLGYALKTYTDYQAQILENQFGGLLLKVNGHELWTKMIGEFNAYNVLAIYA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: KIVFDSRAVATDDVFVAIKGTASDGHEYIEKAIELGARAMVVEELPTDQNSDVTYVVVENSHKALALMAANF
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain
Protein sequence:
MLKLFSAFRKNKIWDFNGGIHPPEMKTQSNGTPLRQVPLAQRFVIPLKQHIGAEGELCVSVGDKVLRGQPLTRGRGKMLPVHAPTSGTVTAIAPHSTAHPSALAELSVIIDADGEDCWIPRDGWADYRSRRREELIERIHQFGVAGLGGAGFPTGVKLQGGGDKIETLIINAAECEPYITADDRLMQDCAAQVVEGIRILAHILQPREILIGIEDNKPQAISMLRAVLADSHDISLRVIPTKYPSGGAKQLTYILTGKQVPHGGRSSDIGVLMQNVGTAYAVKRAVIDGEPITERVVTLTGEAIARPGNVWARLGTPVRHLLNDAGFCPSADQMVIMGGPLMGFTLPWLDVPVVKITNCLLAPSANELGEPQEEQSCIRCSACADACPADLLPQQLYWFSKGQQHDKATTHNIADCIECGACAWVCPSNIPLVQYFRQEKAEIAAIRQEEKRAAEAKARFEARQARLEREKAARLERHKSAAVQPAAKDKDAIAAALARVKEKQAQATQPIVIKAGERPDNSAIIAAREARKAQARAKQAELQQTNDAATVADPRKTAVEAAIARAKARKLEQQQANAEPEEQVDPRKAAVEAAIARAKARKLEQQQANAEPEEQVDPRKAAVEAAIARAKARKLEQQQSNAEPEEQVDPRKAAVEAAIARAKARKLEQQQANAEPEEQVDPRKAAVEAAIARAKARKLEQQQTNAEPEEQVDPRKAAVAAAIARAQAKKAAQQKVVNED

Annotated regions:
phrase: CIECGACAWVC
type: CONSERVED_SITE
name: 4Fe4S_Fe_S_CS
description: 4Fe-4S ferredoxin, iron-sulphur binding, conserved site

phrase: KATTHNIADCIECGACAWVCPSNIPLVQY
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: GEPQEEQSCIRCSACADACPADLLPQQL
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: SCIRCSACADACPADLLPQQLYWFSKGQQHDKATTHNIADCIECGACAWVCPSN
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: WDFNGGIHPPEMKTQSNGTPLRQVPLAQRFVIPLKQHIGAEGELCVSVGDKVLRGQPLTRGRGKMLPVHAPTSGTVTAIAPHSTAHPSALAELSVIIDADG
type: DOMAIN
name: RnfC_N
description: RnfC Barrel sandwich hybrid domain

phrase: VVTLTGEAIARPGNVWARLGTPVRHLLNDAGFCPSADQMVIMGGPLMG
type: DOMAIN
name: Soluble_ligand-bd
description: Soluble ligand binding domain

phrase: IHQFGVAGLGGAGFPTGVKLQGGGDKIETLIINAAECEPYITADDRLMQDCAAQVVEGIRILAHILQPREILIGIEDNKPQAISMLRAVLADSHDISLRVIPTKYPSGGAKQLTYILTGKQVPHGGRSSDIGVLMQNVGTAYAV
type: DOMAIN
name: Nuo51_FMN-bd
description: NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain
Protein sequence:
MRSPFPVPMVPLTIKTWQKKLPNWLTIYRIFIAVPTIIFLGLNHLLGSVASFTVLGNVTIHLQVSLFIGGVLFITAVISDYLDGYWARKWRVVSNFGKLWDPLADKVIINGVLIALVAYGYFHFSFLIVIVLRDLVLDGLRFYAQEKQLIIPANQWGKWKTTWQMIAILMSCFVFSFSLKETNSANTKIFYWAIVHLPYYLATAFSLVSFGIYAQQIYKTIKVKVKL

Annotated regions:
phrase: DGYWARKWRVVSNFGKLWDPLA
type: CONSERVED_SITE
name: CDP_ALCOHOL_P_TRANSF_CS
description: CDP-alcohol phosphatidyltransferase, conserved site
Protein sequence:
MAVYNYDVVVLGSGPAGEGAAMNAAKAGRKVAMVDDRRQVGGNCTHLGTIPSKALRHSVRQIMQFNTNPMFRAIGEPRWFSFPDVLKSAEKVISKQVASRTGYYARNRVDVFFGTGSFADEQTVEVVCPNGVVEKLNAKHIIIATGSRPYRPADIDFHHPRVYDSDTILSLSHTPRKLIVYGAGVIGCEYASIFSGLGVLVELVDNRGQLLSFLDSEISQALSYHFSNNNITVRHNEEYERVEGLDNGVILHLKSGKKIKADALLWCNGRTGNTDKLGLENIGIKVNSRGQIEVDEAYRTTVPNIYGAGDVIGWPSLASAAHDQGRSAAGSIVDNGSWRFVNDVPTGIYTIPEISSIGKNEQELTQAKVPYEVGKAFFKGMARAQIAGEPQGMLKILFHRETLEILGVHCFGYQASEIVHIGQAIMNQPGEHNNLKYFVNTTFNYPTMAEAYRVAAYDGLNRLF

Annotated regions:
phrase: YDVVVLGSGPAGEGAAMNAAKAGRKVAMVDDRRQVGGNCTHLGTIPSKALRHSVRQIMQFNTNPMFRAIGEPRWFSFPDVLKSAEKVISKQVASRTGYYARNRVDVFFGTGSFADEQTVEVVCPNGVVEKLNAKHIIIATGSRPYRPADIDFHHPRVYDSDTILSLSHTPRKLIVYGAGVIGCEYASIFSGLGVLVELVDNRGQLLSFLDSEISQALSYHFSNNNITVRHNEEYERVEGLDNGVILHLKSGKKIKADALLWCNGRTGNTDKLGLENIGIKVNSRGQIEVDEAYRTTVPNIYGAGDVIGWPSLASAAHDQ
type: DOMAIN
name: FAD/NAD-binding_dom
description: FAD/NAD(P)-binding domain

phrase: VPTGIYTIPEISSIGKNEQELTQAKVPYEVGKAFFKGMARAQIAGEPQGMLKILFHRETLEILGVHCFGYQASEIVHIGQAIMNQPGEHNNLKYFVNTTFNYPTMAEAYRV
type: DOMAIN
name: Pyr_nucl-diS_OxRdtase_dimer
description: Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
Protein sequence:
MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGADELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISINSPALADPTLITRLADRFGVQCIVVGIDTWYDGETGKYHVNQYTGDESRTRVTQWETLDWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLEAFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRIC

Annotated regions:
Protein sequence:
MTQQLHSYFGEFGGMYVPQILIPALIQLEKEFIEAMKDISFQTTFKNLLHHYAGRPTPLTLCQNLTSGTCSKLYLKREDLLHGGSHKTNQVLGQALLAKRMHKKEIIAETGAGQHGVAVSIASSLLKLKCRIYMGYKDMKRQELNVLRMKLMGTQVIPVHHGSATLKDACNEAIREWSSTYKHTHYMIGTVAGPHPFPTIVKEFQRIIGSETYNQIQTHEKKLPDAVIACIGGGSNAIGIFSGFIDIPSVQLLGVEAGGLGLHTEYHGSSLQCGETGIYFGMKSPILQSQEGQIKNSYSIAAGLDFPSVGPEHAYLKKINRVKYVSINDEEAINAFQELSLYEGIIPALESAHALAHALKIIRKTPKKKQILIVNLSGRGDKDIITVNNALLNKEICK

Annotated regions:
phrase: LLHGGSHKTNQVLG
type: CONSERVED_SITE
name: Trp_synth_b_CS
description: Tryptophan synthase, beta chain, conserved site

phrase: AGRPTPLTLCQNLTSGTCSKLYLKREDLLHGGSHKTNQVLGQALLAKRMHKKEIIAETGAGQHGVAVSIASSLLKLKCRIYMGYKDMKRQELNVLRMKLMGTQVIPVHHGSATLKDACNEAIREWSSTYKHTHYMIGTVAGPHPFPTIVKEFQRIIGSETYNQIQTHEKKLPDAVIACIGGGSNAIGIFSGFIDIPSVQLLGVEAGGLGLHTEYHGSSLQCGETGIYFGMKSPILQSQEGQIKNSYSIAAGLDFPSVGPEHAYLKKINRVKYVSINDEEAINAFQELSLYEGIIPALESAHALAHALKIIRKTPKKKQILI
type: DOMAIN
name: TrpB-like_PALP
description: Tryptophan synthase beta chain-like, PALP domain
Protein sequence:
MKVKGIQMSWQHLWKWGTLILGLVIICSASHDLWVTVYYGVPVWEDANTPLFCASDAKSYSTESHNVWATHACVPTDPNPQEIVLENVTENFNMWKNNMVEQMHEDIISLWDESLKPCVKLTPLCVTLDCTDISNNTGNITEKDQMKNCSFNMTTELRDRKKEEYALFYKLDIVPLDGNNNSYRMINCNVSTIKQACPKVTFEPIPIHYCAPAGFAILKCRDEKFNGSGPCKNVSSVQCTHGIKPVVSTQLLLNGSVAKGEIVIRSENITDNTKTIIVQLNETIQINCTRPGNNTRKSIRIGPGQAFYATGDIIGDIRQAYCNVSREGWDKMIGRLKEKLKESLNMTNTNNITFNSSAGGDLEITTHSFNCRGEFFYCNTSKLFNSFNSSGNTTAPYELPCRIKQIVRMWQRVGQAMYAPPIKGNITCMSNITGLLLTRDGGNRSDDSEIFRPTGGDMRNNWRSELYKYKIVKIKPLGVAPTKARRRVVGREKRAAGLGAVFLGFLGAAGSTMGAASITLTVQVRQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARLLAVERYLQDQQLLGIWGCSGKLICTTSVPWNTTWSNKSYDDIWGNMTWIEWEKEINNYTQGIFRLLEESQTQQEKNEKDLLAWDKWASLWSWFDISNWLWYIRIFIMIIGGLIGLRIFFAVLSIINRVRQGYSPLSFQTLIPHQREPDRPERIEEEGGEQDKGRSTRLVSGFFSLVWDDLRSLSLFSYHRLRDFVLIAARAAEIL

Annotated regions:
phrase: NNTGNITEKDQMKNCSFNMTTELRDRKKEEYALFYKLDIVPLDGNNNSYRMINCNVSTIKQACPKVTFEPIPIHYCAPAGFAILKCRDEKFNGSGPCKNVSSVQCTHGIKPVVSTQLLLNGSVAKGEIVIRSENITDNTKTIIVQLNETIQINCTRPGNNTRKSIRIGPGQAFYATGDIIGDIRQAYCNVSREGWDKMIGRLKEKLKESLNMTNTNNITFNSSAGGDLEITTHSFNCRGEFFYCNTSKLFNSFNSSGNTTAPYELPCRIKQIVRMWQRVGQAMYAPPIKGNITCMSNITGLLLTRDGGNRSDDSEIFRPTGGDMRNNWRSELYKYKIVKIKPLGVAPTKARRRVVGREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: LWVTVYYGVPVWEDANTPLFCASDAKSYSTESHNVWATHACVPTDPNPQEIVLENVTENFNMWKNNMVEQMHEDIISLWDESLKPCVKLTPLCVTLDCTDISNNTG
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: MGAASITLTVQVRQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARLLAVERYLQDQQLLGIWGCSGKLICTTSVPWNTTWSNKSYDDIWGNMTWIEWEKEINNYTQGIFRLLEESQTQQEKNEKDLLAWDKWASLWSWFDISNWLWYIRIFIMIIGGLIGLRIFFAVLSIINRVRQGYSPLSFQT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: VQVRQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARLLAVERYLQDQQLLGIWGCSGKLICTTSVPWNTTWSNKSYDDIWGNMTWIEWEKEINNYTQGIFRLLEESQTQQEKNEKDLLAWD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MAKKSTPVDSGRSKGKKASAPRGGGPAVIATNRKARHDYHILDTYECGVVLVGTEVKALREGKASLVDAYATIDAGEVWLRGLHIPEYSRGNFWNHTPRRVRKLLLHRREIDSLTGKVRDGNHTLVPLQLYFVDGRLKCELALARGKQDYDKRQDIKRRTEEREVVRELGRKIKGMKG

Annotated regions:
phrase: CGVVLVGTEVKA
type: CONSERVED_SITE
name: SsrA-bd_prot_CS
description: SsrA-binding protein, conserved site
Protein sequence:
MAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIAQSAEQIDAEAQNITLADGNTVHYDYLMIATGPKLAFENVPGSDPHEGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLGIQGVGDSKGILTKGLKEEGIEAYTNCKVTKVEDNKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVPAVAGVEGLCNPGGFVLVDEHQRSKKYANIFAAGIAIAIPPVETTPVPTGAPKTGYMIESMVSAAVHNIKADLEGRKGEQTMGTWNAVCFADMGDRGAAFIALPQLKPRKVDVFAYGRWVHLAKVAFEKYFIRKMKMGVSEPFYEKVLFKMMGITRLKEEDTHRKAS

Annotated regions:
phrase: HVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKGIHFIAQSAEQIDAEAQNITLADGNTVHYDYLMIATGPKLAFENVPGSDPHEGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLGIQGVGDSKGILTKGLKEEGIEAYTNCKVTKVEDNKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVPAVAGVEGLCNPGGFVLVDEHQRSKKYANIFAA
type: DOMAIN
name: FAD/NAD-binding_dom
description: FAD/NAD(P)-binding domain
Protein sequence:
MRFKFPLMAIGLEVVMIVLFALFVQYETSVNTSRNPNETESAAMDVEKTMESYPFFQDVHIMVFAGFGFLMTFLWKYGFSGVGINLLIAALGLQWGTIIQGIFRSHGQKFLIEMKNMIHADFSTVTVLISFGAVLGKTSPVQMLIMTILEITVYAANEYLVFKILWASDTGESMTIHAFGAYFGLAVAGILYRSGLKEKHSNEESVYHSDLFAMIGSLFLWIFWPSFNSATADEAKKQYRAIVNTYFSLAASVVTAYACSSLLESRGKLNMVHIQNATLAGGVAVGTCADMEIPPYYAMIIGSIAGAVSVFGFKFLTPLFTTKLRIHDTCGVHNLHGLPGVIGGLAGIITVALEESDSTKTVSQAAALGSSIATALVGGLITGAILKIPFWAQPPDEDCYDDSVYWEVPERKEYDNHFHELLSTLH

Annotated regions:
phrase: EKTMESYPFFQDVHIMVFAGFGFLMTFLWKYGFSGVGINLLIAALGLQWGTIIQGIFRSHGQKFLIEMKNMIHADFSTVTVLISFGAVLGKTSPVQMLIMTILEITVYAANEYLVFKILWASDTGESMTIHAFGAYFGLAVAGILYRSGLKEKHSNEESVYHSDLFAMIGSLFLWIFWPSFNSATADEAKKQYRAIVNTYFSLAASVVTAYACSSLLESRGKLNMVHIQNATLAGGVAVGTCADMEIPPYYAMIIGSIAGAVSVFGFKFLTPLFTTKLRIHDTCGVHNLHGLPGVIGGLAGIITVALEESDSTKTVSQAAALGSSIATALVGGLITGAILKIPFWAQPPDEDCYDDSV
type: DOMAIN
name: NH4_transpt_AmtB-like_dom
description: Ammonium transporter AmtB-like domain