Protein sequence:
MGARASVLSGGKLDAWEKIRLRPGGKKKYKLKHLVWASRELERFALNPGLLETTEGCRQIITQIQPSIQTGSEEIKSLYNTIAVLYFVHQKIEVKDTKEALDKLEEEQNKSQRKTQQEAADKGVSQNYPIVQNLQGQMVHQALSPRTLNAWVKVIEEKAFSPEVIPMFTALSEGATPQDLNTMLNTVGGHQAAMQMLKDTINDEAAEWDRLHPVHAGPIPPGQMREPRGSDIAGTTSTLQEQIAWMTSNPPVPVGEIYKRWIILGLNKIVRMYSPVSILDIRQGPKEPFRDYVDRFFKTLRAEQATQEVKNWMTDTLLVQNANPDCKTILKALGPGASLEEMMTACQGVGGPSHKARILAEAMSQVTNPVVMMQKGNFKGHRKIVKCFNCGKEGHIARNCRAPRKKGCWKCGKEGHQMKDCTERQANFFRENLAFPQGEAREFSSEQTRANSPTSRELRVRGGDNPLSEAGDQRQGTEPSFNFPQITLWQRPIVTIKVGGQLREALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVRQYDQVLIEICGQKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALTEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGVRYQYNVLPQGWKGSPAIFQHSMTKILEPFRIKNPEMVIYQYMDDLYVGSDLEIGQPRTKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGVKALTDIVPLTAEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGNDQWTYQIYQEPHKNLKTGKYARMRSAHTNDVKQLTEAVQKIATEGIVIWGKTPKFRLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLETEPIVGAETFYVDGAAHRETKKGRAGYVTDRGRQKVVSITETTNQKAELQAICLALQDSGSEVNIVTDSQYALGIIQAQPDKSESDLVNQIIEQLIKKERIYLSWVPAHKGIGGNEQVDKLVSAGIRKVLFLDGIDKAQEEHEKYHNNWRAMASDFNLPPIVAKEIVASCDKCQLKGEAIHGQVDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVKVIHTDNGTNFTSTVVKAACWWAGVKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQILNIQKFRVYYRDSREPIWKGPAKLLWKGEGAVVIQDNSEIKVVPRRKAKIIRDYGKQMAGDDCVAGRQDED

Annotated regions:
phrase: GARASVLSGGKLDAWEKIRLRPGGKKKYKLKHLVWASRELERFALNPGLLETTEGCRQIITQIQPSIQTGSEEIKSLYNTIAVLYFVHQKIEVKDTKEALDKLEEEQNKSQRKTQQEAA
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: YSPVSILDIRQGPKEPFRDYVDRFFKTLRAEQATQEVKNWMTDTLLVQNANPDCKTILKALGPGASLEEMMT
type: DOMAIN
name: Gag_p24_C
description: Retroviral nucleocapsid Gag protein p24, C-terminal domain

phrase: CWKCGKEGHQMKDCT
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: EGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGVRYQYNVLPQGWKGSPAIFQHSMTKILEPFRIKNPEMVIYQYMDDLYVGSDLEIGQPRTKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYE
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: SPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVKVIHTDNGTNFTSTVVKAACWWAGVKQEFGIPYN
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: RASVLSGGKLDAWEKI
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: RPGGKKKYKLKHLVWASR
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: ERFALNPGLLETTEG
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: TGSEEIKSLYNTIAVLYFV
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: HQKIEVKDTKEAL
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: DGIDKAQEEHEKYHNNWRAMASDFNLPPIVAKEIVASCDKC
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: GCWKCGKEGHQMKDCT
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: KCFNCGKEGHIARNC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: IKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDKDFRKYTAFTIPSINNETPGVRYQYNVLPQGWKGSPAIFQHSMTKILEPFRIKNPEMVIYQYMDDLYVGSDLEIGQPRTKIEELREHLLKWGFTTPDKKHQKEPPFLWMGYE
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: VDCSPGIWQLDCTHLEGKIILVAVHVASGYIEAEVIPAETGQETAYFILKLAGRWPVKVIHTDNGTNFTSTVVKAACWWAGVKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDI
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: VQPIQLPDKDSWTVNDIQKLVGKLNWASQIYPGIKVKQLCKLLRGVKALTDIVPLTAEAELE
type: DOMAIN
name: RVT_thumb
description: Reverse transcriptase thumb

phrase: FRVYYRDSREPIWKGPAKLLWKGEGAVVIQDNSEIKVVPRRKAKIIR
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: WQRPIVTIKVGGQLREALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVRQYDQVLIEICGQKAIGTVLVGPTPVNIIGRNLLTQIGCT
type: DOMAIN
name: Retropepsins
description: Retropepsins

phrase: ETFYVDGAAHRETKKGRAGYVTDRGRQKVVSITETTNQKAELQAICLALQDSGSEVNIVTDSQYALGIIQAQPDKSESDLVNQIIEQLIKKERIYLSWVPAHKGIGGNEQVDKLVSAG
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: GCWKCGKEGHQMKDCT
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: KCFNCGKEGHIARNCR
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: VTIKVGGQLREALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVRQYDQVLIEICGQKAIGTVLVGPTPVNIIGRNLL
type: DOMAIN
name: Retropepsin-like_cat_dom
description: Retropepsin-like catalytic domain

phrase: REALLDTGADDTVLEEINLPGKWKPKMIGGIGGFIKVRQYDQVLIEICGQKAIGTVLVGPTPVNIIGRN
type: DOMAIN
name: Peptidase_A2_cat
description: Peptidase A2A, retrovirus, catalytic

phrase: VYYRDSREPIWKGPAKLLWKGEGAVVIQDNSEIKVVPRRKAKI
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: AQEEHEKYHNNWRAMASDFNLPPIVAKEIVASCDKC
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: ALLDTGADDTV
type: ACTIVE_SITE
name: Aspartic_peptidase_AS
description: Aspartic peptidase, active site

phrase: KCFNCGKEGHIARNC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: YYDPSKDLIAEIQKQGNDQWTYQIYQEPHKNLKTGKYARMRSAHTNDVKQLTEAVQKIATEGIVIWGKTPKFRLPIQKETWETWWTEYWQATWIPEWEFVN
type: DOMAIN
name: RVT_connect
description: Reverse transcriptase connection

phrase: IVGAETFYVDGAAHRETKKGRAGYVTDRGRQKVVSITETTNQKAELQAICLALQDSGSEVNIVTDSQYALGIIQAQPDKSESDLVNQIIEQLIKKERIYLSWVPAHKGIGGNEQVDKLVSAGI
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain