nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MNLRALAAKAIFDVLEKGVSLSVALPEQQKHLASGKDKALLAELCYGVMRTLPQIEKRTAECLAKPLKGKQRIIHQLLIVGCYQLYFTRIPSHAAISETAEACRQLKFEGMVKVVNGVLRNIQRQLTPLSNESETLSYNTPGWLIKRLKTAYPGNWQEIIQQSHERPPMWLRNNRLSQSRDEYLAALDKLEIDASAGLSDDAILLAAPKDVATLPLFLEGAASVQDGAAQWAATLLAPQANELILDACAAPGGKSCHLLELEPSIKLIAVDFDAKRLERVQQNLDRLSLKAEVIHGDAANIDSWWQGEQFDRILLDAPCSATGVIRRHPDIKWLRKNHDIEELAELQRQILDHCWKWLKPGGTLLYATCSILPQENRDQISAFLARTADAKLDTLVQQASSQDIGWQITPGQHNMDGFYYARLLKATH

Annotated regions:
phrase: PGWLIKRLKTAYPGNWQEIIQQSHERPPMWLRNNRLSQSRDEYLAALDKLEIDASAGLSDDAILLAAPKD
type: DOMAIN
name: RsmB-like_ferredoxin
description: Ribosomal RNA small subunit methyltransferase B-like, ferredoxin-like domain

phrase: FDRILLDAPCS
type: CONSERVED_SITE
name: RsmB/NOL1/NOP2-like_CS
description: RsmB/NOL1/NOP2-like, conserved site

phrase: ATLLAPQANELILDACAAPGGKSCHLLELEPSIKLIAVDFDAKRLERVQQNLDRLSLKAEVIHGDAANIDSWWQGEQFDRILLDAPCSATGVIRRHPDIKWLRKNHDIEELAELQRQILDHCWKWLKPGGTLLYATCSILPQENRDQISAFLARTADAKLDTLVQQASSQDIGWQITPGQHNMDGFYYAR
type: DOMAIN
name: MeTrfase_RsmB-F_NOP2_cat
description: SAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic core

phrase: IIQQSHERPPMWLRNNRLSQSRDEYLAALDKLEIDASAGLSDDAILLAAPKDVATLPLFLEGAASVQDGAAQWAATLLAPQANELILDACAAPGGKSCHLLELEPSIKLIAVDFDAKRLERVQQNLDRLSLKAEVIHGDAANIDSWWQGEQFDRILLDAPCSATGVIRRHPDIKWLRKNHDIEELAELQRQILDHCWKWLKPGGTLLYATCSILPQENRDQISAFLARTADAKLDTLVQQASSQDIGWQITPGQHNMDGFYYARLLK
type: DOMAIN
name: MeTrfase_RsmB-F_NOP2_dom
description: SAM-dependent methyltransferase RsmB-F/NOP2-type domain

phrase: MNLRALAAKAIFDVLEKGVSLSVALPEQQKHLASGKDKALLAELCYGVMRTLPQIEKRTAECLAKPLKGKQRIIHQLLIVGCYQLYFTRIPSHAAISETAEACRQLKFEGMVKVVNGVLRNIQ
type: DOMAIN
name: NusB_RsmB_TIM44
description: NusB/RsmB/TIM44
Protein sequence:
MASQTSAPAEPAPMPSPEAKTTEGASSYDQADMETKHAGSPCPPKQKSWLARHFSLLLRRDRQAQKAGQLFSGLLALNVVFLGGAFICSMIFNKVSVTLGDVWILLAALKVLSLLWLLYYTVGTTRKPHAVLYRDPHAGPIWVRGSLVLFGSCTVCLNIFRMGYDVSHIHCKSEVELIFPAIEIVFMIIQTWVLWRHCKDCVQVQTNFTRCGLMLTLATNLLMWVLAVTNDSMHREIEAELDALMEKFSGNGTNTCMCLNTTVCEVFRKGYLMLYPFSTEYCLICCAVLFVMWKNVSRSLAAHTGAHPNRSPFRLHGTIFGPLLGLLALVAGVCVFVLFQIEASGPDIARQYFTLYYAFYVAVLPTMSLACLAGTAIHGLEERELDTLKNPTRSLDVVLLMGAALGQMGIAYFSIVAIVATQPHELLNQLILAYSLLLILQHITQNLFIIEGLHRRPLWEPAVSGVMEKQDVELPRRGSLRELGQDLRRASRAYIHSFSHLNWKRRMLKEISLFLILCNITLWMMPAFGIHPEFENGLEKDFYGYRTWFTIVNFGLPLGVFYRMHSVGGLVEVYLGA

Annotated regions:
Protein sequence:
MKVASLLSLALPGAALAATDPFQSRCNEFQNKIDIANVTVRSVAYVAAGQNISQAEVASVCKASVQASVDLCRVTMNISTSDRSHLWAEAWLPRNYTGRFVSTGNGGLAGCVQETDLNFAANFGFATVGTNGGHDGDTAKYFLNNSEVLADFAYRSVHEGTVVGKQLTQLFYDEGYNYSYYLGCSTGGRQGYQQVQRFPDDYDGVIAGSAAMNFINLISWGAFLWKATGLADDPDFISANLWSVIHQEIVRQCDLVDGALDGIIEDPDFCAPVIERLICDGTTNGTSCITGAQAAKVNRALSDFYGPDGTVYYPRLNYGGEADSASLYFTGSMYSRTEEWYKYVVYNDTNWNSSQWTLESAKLALEQNPFNIQAFDPNITAFRDRGGKLLSYHGTQDPIISSTDSKLYYRRVANALNAAPSELDEFYRFFQISGMGHCGDGTGASYIGQGYGTYTSKAPQVNLLRTMVDWVENGKAPEYMPGNKLNANGSIEYMRKHCRYPKHNIHTGPGNYTDPNSWTCV

Annotated regions:
Protein sequence:
MAQQCFHSEYFDSLLHACKPCHLRCSNPPATCQPYCDPSVTSSVKGTYTVLWIFLGLTLVLSLALFTISFLLRKMNPEALKDEPQSPGQLDGSAQLDKADTELTRIRAGDDRIFPRSLEYTVEECTCEDCVKSKPKGDSDHFFPLPAMEEGATILVTTKTGDYGKSSVPTALQSVMGMEKPTHTR

Annotated regions:
phrase: CFHSEYFDSLLHACKPCHLRCSNPPATCQPYCDPS
type: DOMAIN
name: BCMA_Tall-1-bd
description: BCMA, TALL-1 binding
Protein sequence:
MKQEGSARRRGADKAKPPPGGGEQEPPPPPAPQDVEMKEEAATGGGSTGEADGKTAAAAAEHSQRELDTVTLEDIKEHVKQLEKAVSGKEPRFVLRALRMLPSTSRRLNHYVLYKAVQGFFTSNNATRDFLLPFLEEPMDTEADLQFRPRTGKAASTPLLPEVEAYLQLLVVIFMMNSKRYKEAQKISDDLMQKISTQNRRALDLVAAKCYYYHARVYEFLDKLDVVRSFLHARLRTATLRHDADGQATLLNLLLRNYLHYSLYDQAEKLVSKSVFPEQANNNEWARYLYYTGRIKAIQLEYSEARRTMTNALRKAPQHTAVGFKQTVHKLLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQADGTYTLIIRLRHNVIKTGVRMISLSYSRISLADIAQKLQLDSPEDAEFIVAKAIRDGVIEASINHEKGYVQSKEMIDIYSTREPQLAFHQRISFCLDIHNMSVKAMRFPPKSYNKDLESAEERREREQQDLEFAKEMAEDDDDSFP

Annotated regions:
phrase: TLIIRLRHNVIKTGVRMISLSYSRISLADIAQKLQLDSPEDAEFIVAKAIRDGVIEASINHEKGYVQSKEMIDIYSTREPQLAFHQRISF
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain

phrase: DIYSTREPQLAFHQRISFCLDIHNMSVKAMRFPPKSYNKDLESAEERREREQQDLEFAKEMAEDDD
type: DOMAIN
name: 26S_Psome_reg_C
description: 26S proteasome regulatory subunit, C-terminal

phrase: ARYLYYTGRIKAIQLEYSEARRTMTNALRKAPQHTAVGFKQTVHKLLIVVELLLGEIPDRLQFRQPSLKRSLMPYFLLTQAVRTGNLAKFNQVLDQFGEKFQADGTYTLIIRLRHNVIKTGVRMISLSYSRISLADIAQKLQLDSPEDAEFIVAKAIRDGVIEASINHEKGYVQSKEMI
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain

phrase: FGEKFQADGTYTLIIRLRHNVIKTGVRMISLSYSRISLADIAQKLQLDSPEDAEFIVAKAIRDGVIEASINHEKGYVQS
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain
Protein sequence:
MSPHPTALLGLVLCLAQTIHTQEEDLPRPSISAEPGTVIPLGSHVTFVCRGPVGVQTFRLERDSRSTYNDTEDVSQASPSESEARFRIDSVREGNAGLYRCIYYKPPKWSEQSDYLELLVKESSGGPDSPDTEPGSSAGPTQRPSDNSHNEHAPASQGLKAEHLYILIGVSVVFLFCLLLLVLFCLHRQNQIKQGPPRSKDEEQKPQQRPDLAVDVLERTADKATVNGLPEKDRETDTSALAAGSSQEVTYAQLDHWALTQRTARAVSPQSTKPMAESITYAAVARH

Annotated regions:
phrase: EPGTVIPLGSHVTFVCRGPVGVQTFRLERDSRSTYNDTEDVSQASPSESEARFRIDSVREGNAGLYRCIYYKPPKWSEQSDYLELLV
type: DOMAIN
name: Ig_sub
description: Immunoglobulin domain subtype
Protein sequence:
MNMDQLKRQAAARALEEVRDGMQLGLGTGSTAKHFVELLGERVAAGLKVIGVPTSEATRLDATRCGVPLTTLDEIDHLDITVDGADEIDPELNLIKGGGGALLREKIVAAASDRMIVIADDTKWVPTLGRFPLPIEVIPFGLGATRRAIETAFAQCGVSGQMAVRKAKGGDKDGHVFVTDGGHWILDAQLGRIVDPPSLAKALSAIPGVVEHGLFIGLASSAVLAGGEGIRVIERRKPKGD

Annotated regions:
Protein sequence:
MEVTTDQPRWVSHHHPAVLNGQHPDTHHPGLGHSYMDPAQYPLTEEVDVLFNIDGQGNHVPSYYGNSVRATVQRYPPTHHGSQVCRPPLLHGSLPWLDGGKALSSHHTASPWNLSPFSKTSIHHGSPGPLSVYPPASSSSLAAGHSSPHLFTFPPTPPKDVSPDPSLSTPGSAGSARQDEKECLKYQVQLPDSMKLETSHSRGSMTTLGGASSSAHHPITTYPPYVPEYSSGLFPPSSLLGGSPTGFGCKSRPKARSSTEGRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLRQPGNTPMAWGREQGLCYCAKINRPLTMKKEGIQTRNRKMSSKSKKCKKVHDALEDFPKSSSFNPAALSRHMSSLSHISPFSHSSHMLTTPTPMHPPSGLSFGPHHPSSMVTAMG

Annotated regions:
phrase: CVNCGATSTPLWRRDGTGHYLCNACGLYHKMNG
type: DOMAIN
name: Znf_GATA
description: Zinc finger, GATA-type

phrase: ECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKR
type: DOMAIN
name: Znf_GATA
description: Zinc finger, GATA-type

phrase: CVNCGATSTPLWRRDGTGHYLCNA
type: DOMAIN
name: Znf_GATA
description: Zinc finger, GATA-type

phrase: STEGRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRR
type: DOMAIN
name: Znf_GATA
description: Zinc finger, GATA-type

phrase: EGRECVNCGATSTPLWR
type: DOMAIN
name: Znf_GATA
description: Zinc finger, GATA-type

phrase: DGTGHYLCNACGLYHKM
type: DOMAIN
name: Znf_GATA
description: Zinc finger, GATA-type

phrase: STEGRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPLIKPKRRLRQ
type: DOMAIN
name: Znf_GATA
description: Zinc finger, GATA-type
Protein sequence:
MRVMGIKKNYQHLWRWGTMLLGMLMICSAEEKWVTVYYGVPVWRDANTTLFCASDAKTYDTEVHNVWATHACVPTDPNPQEVVLGNVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTNLGSTTNTSSNTSSTTKGGEIKNCSFDITTNTGKVRDYALLYKLDVVPMGKVNTSFRLIHCNTSVITQACPKVSFEPIPIHYCTPAGFALLKCNNKTFSGTGPCTNVSTVQCTHGIRPVASTQLLLNGSLAEERVVIRSSNFTDNAKIIIVQLNESVEINCTRPNNNTRKGIYLGQGRAWYTTRRIIGDIRQAHCNISREKWNNTLKLITEKLREQFGNKTIIFNRSSGGDLEVVMHSFNCGGEFFYCNTSQLFNSTWNDTSTWNGNTGTTVTLPCRIKQIVNMWQKVGKAMYAPPIQGQIRCSSNITGLLLTRDGGNNESENTETFRPAGGNMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQREKRAVGLIGAMFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQRNLLMAIEAQQNMLRLTVWGIKQLQARVLAVERYLKDQQLMGIWGCSGKLICTTAVPWNASWSNKSLDQIWNNMTWMEWEREIDNYTREIYNLIELSQNQQEQNEQELLELDKWASLWNWFDITKWLWYIKIFIMVVGGLVGLRIVFAVLSIVNRVRQGYSPLSLQTRLPTQRGPGRPEGIEEEGGERDRDRSETLVNGFLTLFWEDLRNLCLFSYHRLRDLLLIV

Annotated regions:
phrase: MGAASITLTVQARQLLSGIVQQQRNLLMAIEAQQNMLRLTVWGIKQLQARVLAVERYLKDQQLMGIWGCSGKLICTTAVPWNASWSNKSLDQIWNNMTWMEWEREIDNYTREIYNLIELSQNQQEQNEQELLELDKWASLWNWFDITKWLWYIKIFIMVVGGLVGLRIVFAVLSIVNRVRQGYSPLSL
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: KWVTVYYGVPVWRDANTTLFCASDAKTYDTEVHNVWATHACVPTDPNPQEVVLGNVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTNLGSTTNTSSNTSSTTKGGEIKNCSFDITTNTGKVRDYALLYKLDVVPMGKVNTSFRLIHCNTSVITQACPKVSFEPIPIHYCTPAGFALLKCNNKTFSGTGPCTNVSTVQCTHGIRPVASTQLLLNGSLAEERVVIRSSNFTDNAKIIIVQLNESVEINCTRPNNNTRKGIYLGQGRAWYTTRRIIGDIRQAHCNISREKWNNTLKLITEKLREQFGNKTIIFNRSSGGDLEVVMHSFNCGGEFFYCNTSQLFNSTWNDTSTWNGNTGTTVTLPCRIKQIVNMWQKVGKAMYAPPIQGQIRCSSNITGLLLTRDGGNNESENTETFRPAGGNMRDNWRSELYKYKVVKIEPLGVAPTKAKRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: VQARQLLSGIVQQQRNLLMAIEAQQNMLRLTVWGIKQLQARVLAVERYLKDQQLMGIWGCSGKLICTTAVPWNASWSNKSLDQIWNNMTWMEWEREIDNYTREIYNLIEL
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MRFYLTKLFAAAGALAWTTGLSTANAVTTPVSPLSRSSDHHQSDDSTQRRLRTLNGADEERMSPLTMTRLRAALAFELELVDFDSLAQNQFLARVREMLGIKVTGSTTAGLPKMIRRFGVKNSAKNVAKRVQDPAKQADLIAGLLIYPVKQRDLLGDELLRKWPYLTVSAIKKRVIAEKNRKVHKKPRPFAAHVHAPTIAAY

Annotated regions:
Protein sequence:
MSQLLAVILAAGKGTRMKSALPKVLHQVGGKPMVQHVLDAATFAGATKNVVIVGFGAQSVVDALQGQAEFAVQSEQLGTGHAVMQARNELVCFNGTVMVLCGDTPLLTGELLRTLYAEHTQAQAAATVLTAIMPEPAGYGRVIRDTAGQVVKIVEHKDAGPAELAVKEINTGIYCFEAKLLLKALEGLTCNNAQGEYYLTDVIAILNSQGQKVWAVSAADHRETMGINSRVHLAEAEGIIRRRKLETLMENGVTIMDPNSTFIDSQVEIGPDTIIYPFTWIEGCSRIGANSVIGPSSRLADTIVGDDSILHFTYAHDCTVGKHVTVGPYVHLRPHTELKDGVKIGNFVEVKNTLVGEGSKIPHLSYIGDTDMGAGVNIGSGTITVNYDGKNKHRTTIEDDAFIGCNTNLVAPVTVGQGAYVAAGSTITKNVPPGSLGVARARQNNIEGWAEKQRR

Annotated regions:
phrase: IGCNTNLVAPVTVGQGAYVAAGSTITKN
type: CONSERVED_SITE
name: Hexapep_transf_CS
description: Hexapeptide transferase, conserved site

phrase: DCTVGKHVTVGPYVHLRPHTELKDGVKIGNFVEVK
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: TTIEDDAFIGCNTNLVAPVTVGQGAYVAAGSTIT
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: AVILAAGKGTRMKSALPKVLHQVGGKPMVQHVLDAATFAGATKNVVIVGFGAQSVVDALQGQAEFAVQSEQLGTGHAVMQARNELVCFNGTVMVLCGDTPLLTGELLRTLYAEHTQAQAAATVLTAIMPEPAGYGRVIRDTAGQVVKIVEHKDAGPAELAVKEINTGIYCFEAKLLLKALEGLTCNNAQGEYYLTDVIAILNSQGQKVWA
type: DOMAIN
name: NTP_transferase_dom
description: Nucleotidyl transferase domain

phrase: GVTIMDPNSTFIDSQVEIGPDTIIYPFTWIEGCSRIGANSVIGPSSRLADTIVGDDSILHFTYAHDCTVGKHVTVGPYVHLRPHTELKDGVKIGNFVEVKNTLVGEGSKIPHLSYIGDTDMGAGVNIGSGTITVNYDGKNKHRTTIEDDAFIGCNTNLVAPVTVGQGAYVAAGSTITKNVPPGSLGVARAR
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain
Protein sequence:
MNDNISMYFAKLLEKVGIKRIWGITGDSLNGLSDSLEKLNKIKWIGTRHEETAAFAAGADAKVSGEIAVCAGSCGPGNLHLINGLYDCQRKGVPILAIASHIPSSEIGSGYFQETHPQDLFKECSIFCELVSNPEQMPNILETAIRQAILKQGVSVIVIPGDVMLNPMPENSKLLLSKPSLPKVLPDEHDIIKLAKILNENEKITFLCGAGCKNAHDEVIKVAQLLNAPVVHALGGKEHIEWENPNSVGMTGLIGYESGYYAMDNSDVVLVLGSTFPYKAFYPQDARIIQIDIKPESLGRHCQLDLALIGDIKASLEMLIPKIDKKENNIFIKSALKHYKNTVEKFDKLASENSKVGLIHPQYLTKLINKYASDDAIFSCDVGTPTVWAARYLDMNGKRKLIGSFNHGSMANALPQAIGAKVSSPNKEVIALCGDGGFAMLMGDFLTLIQHKIKAKIVIYNNSSLGFVAIEMKAGGYLYENTDLTNPDFSAIANAAGVKGYKVEKPEELESTIKEFLKYDGAALLDVTTAKQELTMPPKITFESAKGFGIYMLRTIINGKGDELVEVAKENLLR

Annotated regions:
phrase: DVGTPTVWAARYLDMNGKRKLIGSFNHGSMANALPQAIGAKVSSPNKEVIALCGDGGFAMLMGDFLTLIQHKIKAKIVIYNNSSLGFVAIEMKAGGYLYENTDLTNPDFSAIANAAGVKGYKVEKPEELESTIKEFLKYDGAALLD
type: DOMAIN
name: TPP_enzyme_TPP-bd
description: Thiamine pyrophosphate enzyme, TPP-binding

phrase: IHPQYLTKLINKYASDDAIFSCDVGTPTVWAARYLDMNGKRKLIGSFNHGSMANALPQAIGAKVSSPNKEVIALCGDGGFAMLMGDFLTLIQHKIKAKIVIYNNSSLGFVAIEMKAGGYLYENTDLTNPDFSAIANAAGVKGYKVEKPEELESTIKEFLKYDGAALLDVTTAKQE
type: DOMAIN
name: TPP_POXB-like
description: Pyruvate oxidase POXB-like, PP-binding domain

phrase: NISMYFAKLLEKVGIKRIWGITGDSLNGLSDSLEKLNKIKWIGTRHEETAAFAAGADAKVSGEIAVCAGSCGPGNLHLINGLYDCQRKGVPILAIASHIPSSEIGSGYFQETHPQDLFKECSIFCELVSNPEQMPNILETAIRQAILKQGVSVIVIPGD
type: DOMAIN
name: TPP_PYR_POXB-like
description: Pyruvate oxidase POXB-like, pyrimidine-binding domain

phrase: IGAKVSSPNKEVIALCGDG
type: CONSERVED_SITE
name: TPP-bd_CS
description: TPP-binding enzyme, conserved site

phrase: KLAKILNENEKITFLCGAGCKNAHDEVIKVAQLLNAPVVHALGGKEHIEWENPNSVGMTGLIGYESGYYAMDNSDVVLVLGSTFPYKAFYPQDARIIQIDIKPESLGRHCQLDLALIGDIKASLEM
type: DOMAIN
name: Thiamin_PyroP_enz_cen_dom
description: Thiamine pyrophosphate enzyme, central domain

phrase: ISMYFAKLLEKVGIKRIWGITGDSLNGLSDSLEKLNKIKWIGTRHEETAAFAAGADAKVSGEIAVCAGSCGPGNLHLINGLYDCQRKGVPILAIASHIPSSEIGSGYFQE
type: DOMAIN
name: Thiamin_PyroP_enz_TPP-bd_dom
description: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain
Protein sequence:
MPRPGNGMSDPRTTNLLDLDRRGLEGFFAAMGEKSFRAQQVMKWIYQLDVDDFAGMSNLSKALRERLHNAARMELPRVVMDRLSADGSRKLLLQLADGNCIETVFIPEKERGTLCVSSQVGCMLNCSFCSTAQQGFNRNLTTAEIIGQVLLASRALGGDVQYKRAITNVVMMGMGEPLLNYDAVVRAMNIMRDDLAFGLSKRRITLSTSGIVPELDRLRAECDVSLAVSLHATNDELRNELVPINRKYPIAELMEACRRYVADEPRRRVTFEYVMLAGVNDSDAHARELLRLLRRVPSKVNLIPFNPFPNTAYVSSDPQRILEFQNILINGGIVTVTRKTRGDDIAAACGQLAGEFRDRTRRRERQLEVAVQEVRG

Annotated regions:
phrase: SSQVGCMLNCSFCSTAQQGFNRNLTTAEIIGQVLLASRALGGDVQYKRAITNVVMMGMGEPLLNYDAVVRAMNIMRDDLAFGLSKRRITLSTSGIVPELDRLRAECDVSLAVSLHATNDELRNELVPINRKYPIAELMEACRRYVADEPRRRVTFEYVMLAGVNDSDA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: EKERGTLCVSSQVGCMLNCSFCSTAQQGFNRNLTTAEIIGQVLLASRALGGDVQYKRAITNVVMMGMGEPLLNYDAVVRAMNIMRDDLAFGLSKRRITLSTSGIVPELDRLRAECDVSLAVSLHATNDELRNELVPINRKYPIAELMEACRRYVADEPRRRVTFEYVMLAGVNDSDAHARELLRLLRRVPSKVNLIPFNPFPNTAYVSSDPQRILEFQNILINGGIVTVTRKTRG
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: GTLCVSSQVGCMLNCSFCSTAQQGFNRNLTTAEIIGQVLLASRALGGDVQYKRAITNVVMMGMGEPLLNYDAVVRAMNIMRDDLAFGLSKRRITLSTSGIVPELDRLRAECDVSLAVSLHATNDELRNELVPINRKYPIAELMEACRRYVADEPRRRVTFEYVMLAGVNDSDAHARELLRLLRRVPSKVNLIPFNPFPNTAYVSSDPQRILEFQNILI
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: TNLLDLDRRGLEGFFAAMGEKSFRAQQVMKWIYQLDVDDFAGMSNLSKALRERLHNA
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: RTTNLLDLDRRGLEGFFAAMGEKSFRAQQVMKWIYQLDVDDFAGMSNLSKALRERLHNAARMELPRVVMDRLSADGSRKLLLQLADGNCIETVFIPEKERGTLCVSSQVGCMLNCSFCSTAQQGFNRNLTTAEIIGQVLLASRALGGDVQYKRAITNVVMMGMGEPLLNYDAVVRAMNIMRDDLAFGLSKRRITLSTSGIVPELDRLRAECDVSLAVSLHATNDELRNELVPINRKYPIAELMEACRRYVADEPRRRVTFEYVMLAGVNDSDAHARELLRLLRRVPSKVNLIPFNPFPNTAYVSSDPQRILEFQNILINGGIVTVTRKTRGDDIAAACGQLAGEFRDRTRRR
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MGIYKYIREAWKRPKESYVRQLLWERLQQWRREPAVVRIERPTRLDRARALGYKPKQGIIVVRVRVRRGGLRKPRPKNSKKPATLGVNKITMGKSIQRIAEERAARKYPNMEVLNSYWVGEDGKHKWYEVILVDPYHPAIKADPQLNWLCTGKHRGRAFRGLTSAGKKGRGLRNKGIGAEKVRPSIRAHGRRGK

Annotated regions:
phrase: DRARALGYKPKQGIIVVRVRVRR
type: CONSERVED_SITE
name: Ribosomal_eL15_CS
description: Large ribosomal subunit protein eL15, conserved site
Protein sequence:
MRIVIATGNNDKVREINEILKDTEFEAVSMKSLGLNPDIVEDADSFRGNALIKAHAVHDLCNEYVIADDSGLCIDALDGAPGIYSSRFCGEDSTYEEKFKKIFELLKDVPEDKRTAHFTCAIAVVRPDGSDFTVEEYFEGVLHEEPKGENGFGYDPIFYVPEYGMTSAEMDPSVKHSMSHRGKALRAMVKKLTENKD

Annotated regions:
Protein sequence:
MKTIIVGISGSVAAYKTCDLVRALKKLNYDIEVIMTENATKFISPLTLGALINKPVLVDDFDDQGYQIKHISYAKKADCFIIVPATANIIGKIANGVCDDIVTSTFLAATCPKLIAPAMNVNMYDNLATQRNIERCKTYGIKFVEPGYGLLACGDVGRGKLTDTDDIINMVEYCLSPKPLKHKRVLVTAGPTQEAIDPVRYITNHSSGKMGYALAKRAYQLGAKVTLISGPTDLRVPYGVEVINIKSARAMFEAVKESYEKQDYIIKAAAVGDYRVKEIATNKIKKHEDSLILEMVKNDDILTYLGAHKTTQTICGFAMETQNLIENAKDKFKRKNCDLLVANNLNENGAGFKKDTNKVTFISKNDVQSIELMSKDELSDLILKKLIKIKESHSC

Annotated regions:
phrase: KTIIVGISGSVAAYKTCDLVRALKKLNYDIEVIMTENATKFISPLTLGALINKPVLVDDFDDQGYQIKHISYAKKADCFIIVPATANIIGKIANGVCDDIVTSTFLAATCPKLIAPAMNVNMYDNLATQRNIERCKTYGIKFVEPGYGLLACGDVGRGKLTDTDD
type: DOMAIN
name: Flavoprotein
description: Flavoprotein

phrase: LKHKRVLVTAGPTQEAIDPVRYITNHSSGKMGYALAKRAYQLGAKVTLISGPTDLRVPYGVEVINIKSARAMFEAVKESYEKQDYIIKAAAVGDYRVKEIATNKIKKHEDSLILEMVKNDDILTYLGAHKTTQTICGFAMETQNLIENAKDKFKRKNCDLLVANNLNENGAGFKKDTNKVTF
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal
Protein sequence:
MKRLIAWLSDLRVAIVLLFLIALASAVGTAIPQGDAPRSYVEAYATRPWLGLLNGEQVLQLQLDHVYSSVWFLSLLAWLGLALILCSWRRQWPALQAARRWIDYSNPRQLSKLAIAESLPCTDSNSALQAFSTVLSQQGWRLERKDNRLAARKGTAGRVGPLLVHTGLILLMLGAVWGVLAGNRLERFLAPGRTLDLLSRDGDSQVSILLEAFQVDRDPAGRAEQFRSQLHLEENGNSLDREISVNHPLRHRGITIYQADWSLAAITLQIGRSPQLQLALRSFPELGEQVWGLVLPTRPDGSEPVFLSVENEQGPINIFDTDGTLLTLLRPGGPAVDVKGLPMRVNSVLPASGLLLKRDPGVPLVYLGFAVMLIGGGLSLIATRQLWAIASEGQLHVGGLCNRNLTAFSKELPSLLRQTALAHQQG

Annotated regions:
phrase: LPMRVNSVLPASGLLLKRDPGVPLVYLGFAVMLIGGGLSLIATRQLWAIASEGQLHVGGLCNRNLTAFSKE
type: DOMAIN
name: ResB-like_domain
description: ResB-like domain

phrase: LRVAIVLLFLIALASAVGTAIPQGDAPRSYVEAYATRPWLGLLNGEQVLQLQLDHVYSSVWFLSLLAWLGLALILCSWRRQWPALQAARRWIDYSNPRQLSKLAIAESLPCTDSNSALQAFSTVLSQQGWRLERKDNRLAARKGTAGRVGPLLVHTGLILLMLGAVWGVLAGNRLERFLAPGRTLDLLSRDGDSQVSILLEAFQVDRDPAGRAEQFRSQLHLEENGNSLDREISVNHPLRHRGITIYQADWSLAAITLQ
type: DOMAIN
name: ResB-like_domain
description: ResB-like domain
Protein sequence:
MAAVAVLRAFGASGPMCLRRGPWAQLPARFCSRDPAGAGRRESEPRPTSARQLDGIRNIVLSNPKKRNALSLAMLKSLQSDILHDADSNDLKVIIISAEGPVFSSGHDLKELTEEQGRDYHAEVFQTCSKVMMHIRNHPVPVIAMVNGLAAAAGCQLVASCDIAVASDKSSFATPGVNVGLFCSTPGVALARAVPRKVALEMLFTGEPISAQEALLHGLLSKVVPEAELQEETMRIARKIASLSRPVVSLGKATFYKQLPQDLGTAYYLTSQAMVDNLALRDGQEGITAFLQKRKPVWSHEPV

Annotated regions:
Protein sequence:
MAHNDTIDIISSSPEFPDISVLVAKAASKKSALRTGSNATPIPSDAVGLGTFTSAASIWHLSQVMDEEKPTKNSSSRPAKETPAIATSVSTVAVEVSATTTTAVSEEKPGKKPRKPRKKKDETTAAVDENAPPKPPARRGRPPKQKDVEGQPALPKSKATKPAAKPRASRKKAETVSKHFAASAHASTADPPEEPSKNPAASKPPKPIPVQNIDEPVDLEPAARRRLDWTPPPDDRPPPAAGNSSVVKELPSSTTAHTEPPVAFGKLLDTYGCEPETIQPSEGTKGNVLGKRKLIEMVATTTTTNTATDKLTSPETSPTKPKAPKKKPRTITDLATAAYRIQDPVDDSISTVAPKQDTLLGYIDVEDEDAAVKPGGAKTKAVSKKPAKARVSKKKPEPRKQLLLSPHSALRQVSGQNFVFGTSSQLVTEDTDLLRALHESMKTAGNAQESDPFMSSPVKFSNIASRSKMGNNKLWRVGARDEDGDLLDLEIFDLTEAVEVPEDVVQQADKPAVDVPEREASPRKQVEREAERAIGIFSSDPVATERLTITGPETLISTLSIKGKESVRRTTKSPPPNPVAPPRERTPQRARPPSRDSLSSRLRSPQTETSPRPTTPPRVSAVLDLDYDFDDYEPPPSNQEHYQLLEQSQKTSPSKTQQRKQQQQQQQQQQQQQKKRDPPPRPKYEVFTDAQLSREIASYGFKPIKKRAAMIRLLEQCWESKTGAATGKSTGLGDNTLQEGTGSLEPAHRSINSVAVSPDRGRGQTIQG

Annotated regions:
Protein sequence:
MADVPADLAAVWPRVLEQLLGEGRGQGVEAKDEHWIRRCQPLALVADTALLAVPNEFAKGVLEGRLAPIVSETLSRECGRPIRIAITVDDSAGEPPPAAPPAQQTPKPRYEEPELPSGPYEGYGRHRGGADQLPGTEPRPEQLPSARPDQLPTVRPAYPSEYHRPEPGAWPRPAQDEYGWQQPRLGFPERDPYASPSSQDAYGSPSQDYRPQGMDRPPYEQQRGDYDTPRAEYEPARPDYDSARPDYESARPEYDQRDPVRRELPEPPAHRGGPGADMPSAGAPGPPAAQPAPASGPGEPTARLNPKYLFDTFVIGASNRFAHAAAVAVAEAPAKAYNPLFIYGESGLGKTHLLHAIGHYARSLYPGTRVRYVSSEEFTNEFINSIRDGKGDSFRKRYREMDILLVDDIQFLADKESTQEEFFHTFNTLHNANKQIVLSSDRPPKQLVTLEDRLRNRFEWGLITDVQPPELETRIAILRKKAVQEQLNAPPEVLEFIASRISRNIRELEGALIRVTAFASLNRQPVDLGLTEIVLKDLIPGGEDSTPEITATAIMAATADYFGLTVDDLCGSSRGRQLVTARQIAMYLCRELTDLSLPKIGAQFGGRDHTTVMHADRKIRALMAERRSIYNQVTELTNRIKNG

Annotated regions:
phrase: AIMAATADYFGLTVDDLCGSSRGRQLVTARQIAMYLCRELTDLSLPKIGAQFGGRDHTTVMHADRK
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: LNPKYLFDTFVIGASNRFAHAAAVAVAEAPAKAYNPLFIYGESGLGKTHLLHAIGHYARSLYPGTRVRYVSSEEFTNEFINSIRDGKGDSFRKRYREMDILLVDDIQFLADKESTQEEFFHTFNTLHNANKQIVLSSDRPPKQLVTLEDRLRNRFEWGLIT
type: DOMAIN
name: DnaA_dom
description: Chromosomal replication initiator protein DnaA, ATPAse domain

phrase: IGAQFGGRDHTTVMHADRK
type: CONSERVED_SITE
name: Chromosome_initiator_DnaA_CS
description: Chromosomal replication control, initiator DnaA, conserved site

phrase: AYNPLFIYGESGLGKTHLLHAIGHYARSLYPGTRVRYVSSEEFTNEFINSIRDGKGDSFRKRYREMDILLVDDIQFLADKESTQEEFFHTFNTLHNANKQIVLSSDRPPKQLVTLEDRLRNRFEWGLI
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: TATAIMAATADYFGLTVDDLCGSSRGRQLVTARQIAMYLCRELTDLSLPKIGAQFGGRDHTTVMHADRK
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: DYFGLTVDDLCGSSRGRQLVTARQIAMYLCRELTDLSLPKIGAQFGGRDHTTVMHADRKIRALMAERRSIYNQVTELTNR
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal
Protein sequence:
MIVGYSVFFHHTVTRRTWCAVTIFFCRQRNVNSAMIRAISIRWLLQRPGDKRHSAWLVARSKSLLVRNLSTTNQVKGETEEPSQADLLREFAHMPVERIRNFSIIAHVDHGKSTLADRLLELTGAIARNGGQHQVLDNLQVERERGITVKAQTASIFHRHKGQLYLLNLIDTPGHVDFSNEVSRSLAACDGVVLLVDACHGVQAQTVANYHLAKQRQLAVVPVLNKIDIKHANPDQVCQDLKLLFGIDPDEVLRVSAKLGTGVSEVLERVIETVPPPQVQRDSDFRALIFDSWFDKYRGALNLIYVLNGKLEQNQDIQSLATKKVYSVKSISVLRPAECPVPDVSAGQVGLIACNMRNSKESIVGDTIHLKNQAVAAAGSYRPQQPLVFAGVFPADQSKHVALRSAIDKMVLNDSAVTVKIDSSPALGQGWRLGFLGLLHMEVFCQRLEQEHGAEPIITAPSVTYRLVLSNPKMIKQQGRDTMDISNAALFPEPHSIKEYYEPLVLGTIITPTEYVGQVISLCVERRGLQQSSVNIDDTRVLMKYVLPLSEIILDFHDRLKSLSSGYASFSYEDHGYHPSHLVRLDIHLNGKPVEELCRIVHVSKATGVARQMVLKLRELIPKQMVQIAIQACVGSKVLARETIKAYRKDVTAKLYGGDVTRRMKLLKQQAEGKKKMRMFANIRVPHETFINVLKR

Annotated regions:
phrase: NFSIIAHVDHGKS
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: ERGITVKA
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: NLIDTPGHVD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: RSLAACDGVVL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: VVPVLNKID
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: RNFSIIAHVDHGKSTLADRLLELTGAIARNGGQHQVLDNLQVERERGITVKAQTASIFHRHKGQLYLLNLIDTPGHVDFSNEVSRSLAACDGVVLLVDACHGVQAQTVANYHLAKQRQLAVVPVLNKIDIKHANPDQVCQDLKLLFGIDPDEVLRVSAKLGTGVS
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: ERIRNFSIIAHVDHGKSTLADRLLELTGAIARNGGQHQVLDNLQVERERGITVKAQTASIFHRHKGQLYLLNLIDTPGHVDFSNEVSRSLAACDGVVLLVDACHGVQAQTVANYHLAKQRQLAVVPVLNKIDIKHANPDQVCQDLKLLFGIDPDEVLRVSAKLGTGVSEVLERVIETVPPP
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: YYEPLVLGTIITPTEYVGQVISLCVERRGLQQSSVNIDDTRVLMKYVLPLSEIILDFHDRLKSLSSGYASFSYEDHGYHPSHLVRL
type: DOMAIN
name: EFG_V-like
description: Elongation factor EFG, domain V-like

phrase: EPLVLGTIITPTEYVGQVISLCVERRGLQQSSVNIDDTRVLMKYVLPLSEIILDFHDRLKSLSSGYASFSYEDHGYHPS
type: DOMAIN
name: LepA_IV
description: Elongation factor 4, domain IV

phrase: LNGKPVEELCRIVHVSKATGVARQMVLKLRELIPKQMVQIAIQACVGSKVLARETIKAYRKDVTAKLYGGDVTRRMKLLKQQAEGKKKMRMFANIRVPHETFINVL
type: DOMAIN
name: LepA_CTD
description: GTP-binding protein LepA, C-terminal

phrase: ERIRNFSIIAHVDHGKSTLADRLLELTGAIARNGGQHQVLDNLQVERERGITVKAQTASIFHRHKGQLYLLNLIDTPGHVDFSNEVSRSLAACDGVVLLVDACHGVQAQTVANYHLAKQRQLAVVPVLNKIDIKHANPDQVCQDLKLLFGIDPDEVLRVSAKLGTGVSEVLERVIETVP
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: DNLQVERERGITVKA
type: CONSERVED_SITE
name: G_TR_CS
description: Tr-type G domain, conserved site
Protein sequence:
MSGGGGKDRIAVFPSRMAQTLMKTRLKGAQKGHSLLKKKADALNLRFRDILKKIVENKVLMGEVMKEAAFSLAEAKFTAGDFSHTVIQNVSQAQYRVRMKKENVVGVLLPVFDAYQDGPDAYDLTGLGKGGANIARLKKNYNKAIELLVELATLQTCFITLDEAIKVTNRRVNAIEHVIIPRIENTLTYIVTELDEMEREEFFRMKKIQANKKKLKEQEAAQRALEGPPKEEAGGTHSENQPPRNLLAVEEDNLPVLFN

Annotated regions:
Protein sequence:
MERAISTTPILDQALTCVQSYKALAATVQELASPELQRSIEEGLAQFLTHMPEFNILVNAVEPPHTSWDYLLRNDASQRGEMTMLLMELQCEIDQMAFAIRQAMQQQHPEAEPLSNNSRLVDAWTENLRSVEDHTVWRLAFWRRDHAVHTTYPTTNPLVNQSFYFAIRNELGLDVSTQFRECIRRAITQECPTITARPALHRRLVDLVVQRRRFWNFQRRIRGLSKDAVLWGRDALAPPHFAPGDERFTCPFCFFDLPVAAYRTPRAWTDHVMSDLEGYVCLYETCSSTRSWPETCPHACTSFGAWFTAMAGSFAEGVEWCSHAFACDGRRLEEVHRPRCAAPAVRLDSVCPLCGREPAVEETELRMADAADPLQDDDQNRAKARLLLSHIAGHLEVITPMAFTWNTDRNALDPDRRLFWGDIGSPGGAGGSA

Annotated regions:
Protein sequence:
MLRRVAPSLRRAILTSSAHGRAGAQLTEPGLSPRHALLPQWRLCSSAASTNSPPPPPPPPSSPPQGTPRPAGGSTVSSLNPAEVAKFAAIAETWWDSEGPFKPLHLMNPTRLSFIRSTLCRHFRRDPNSSKPLEGLKVIDVGCGGGILSEPLARMGATVTGIDAVDKNIKIARVHAASDPSTASIEYFCTTAEDLVKENKQFDAVISLEVIEHVANPSGFCESLSALTVPNGATVISTINRSMRAYATAIVAAEYILNWLPKGTHQWSKLVTPEELVLILERASISVQEMAGFVYNPLRGEWSLSDDLTVNYIAYGMKKVETPSESN

Annotated regions:
Protein sequence:
MSNKMWGGRFTDRPDAIMEEINVSIDVDRHLYAQDIAASKAHAAMLAAQGIITANDAKNIGKGLDTILSEIGAGKFTFKRALEDIHMNVESRLAELIGPAAGRLHTARSRNDQVATDFRLYVRDVLDETDAALAAFQFALAERALEQADTVMPGFTHLQTAQPVTFGHHLMAYVEMAARDRGRFQDARKRLNESPLGAAALAGTSFPIDRHATAQKLGFVRPMANSLDAVSDRDFVLETLSAASICAVHLSRFAEEIVIWTSPLVGLIRLSDKFTTGSSIMPQKRNPDAAELVRAKTGRVIGALNGLLIVMKGLPLAYQKDMQEDKQGAMEGFAALSLAIRAMTGMVRDLVPEHDRMRAAAGEGYATATDLADWLVRTLKMPFRDAHHVTGRIVGLAAKQGLALHELPLAEMQAVEKRITRDALAVLSVESSVKSRTSYGGTAPKNVRAQAKAWLKRLEKERKLG

Annotated regions:
phrase: GSSIMPQKR
type: CONSERVED_SITE
name: Fumarate_lyase_CS
description: Fumarate lyase, conserved site

phrase: GRFTDRPDAIMEEINVSIDVDRHLYAQDIAASKAHAAMLAAQGIITANDAKNIGKGLDTILSEIGAGKFTFKRALEDIHMNVESRLAELIGPAAGRLHTARSRNDQVATDFRLYVRDVLDETDAALAAFQFALAERALEQADTVMPGFTHLQTAQPVTFGHHLMAYVEMAARDRGRFQDARKRLNESPLGAAALAGTSFPIDRHATAQKLGFVRPMANSLDAVSDRDFVLETLSAASICAVHLSRFAEEIVIWTSPLVGLIRLSDKFTTGSSIMPQKRNPDAAELVRAKTGRVI
type: DOMAIN
name: Fumarate_lyase_N
description: Fumarate lyase, N-terminal

phrase: YATATDLADWLVRTLKMPFRDAHHVTGRIVGLAAKQGLALHELPLAEMQAVEKRITRDALAVLSVESSV
type: DOMAIN
name: Arg_succ_lyase_C
description: Argininosuccinate lyase, C-terminal