Protein sequence:
MGARNSVLSGKKADELEKIRLRPGGKKKYMLKHVVWAANELDRFGLAESLLENKEGCQKILSVLAPLVPTGSENLKSLYNTVCVIWCIHAEEKVKHTEEAKQIVQRHLVVETGTAETMPKTSRPTAPSSGRGGNYPVQQIGGNYVHLPLSPRTLNAWVKLIEEKKFGAEVVPGFQALSEGCTPYDINQMLNCVGDHQAAMQIIRDIINEEAADWDLQHPQPAPQQGQLREPSGSDIAGTTSSVDEQIQWMYRQQNPIPVGNIYRRWIQLGLQKCVRMYNPTNILDVKQGPKEPFQSYVDRFYKSLRAEQTDAAVKNWMTQTLLIQNANPDCKLVLKGLGVNPTLEEMLTACQGVGGPGQKARLMAEALKEALAPVPIPFAAAQKRGPRKPIKCWNCGKEGHSARQCRAPRRQGCWKCGKMDHVMAKCPDRQAGFFRPWSMGKEAPQFPHGSSASGADANCSPRGPSCGSAKELHAVGQAAERKQREALQGGDRGFAAPQFSLWRRPVVTAHIEGQPVEVLLDTGADDSIVTGIELGPHYTPKIVGGIGGFINTKEYKNVEIEVLGKRIKRTIMTGDTPINIFGRNLLTALGMSLNLPIAKVEPVKVALKPGKVGPKLKQWPLSKEKIVALREICEKMEKDGQLEEAPPTNPYNTPTFAIKKKDKNKWRMLIHFRELNRVTQELYRSPIRIPHPAGLAKRKRITVLDIGDAYFSIPLDEEFRQYTAFTLPSVNNAEPGKRYIYKVLPQGWKGSPAIFQYTMRHVLEPFRKANPDVTLVQYMDDILIASDRTDLEHDRVVLQLKELLNSIGFSTPEEKFQKDPPFQWMGYELWPTKWKLQKIELPQRETWTVNDIQKLVGVLNWAAQIYPGIKTKHLCRLIRGKMTLTEAVQWTEMAEAEYEENNIILSQEQEGCYYQEGKPLEATVIKSQDNQWTYKIHQEDKILKVRKFAKIKNTHTNGVRLLAHVIQKIGKEAIVIVGQVPKFHLPVERDVWEQWWTDYWQVTWIPEWDFISTPPLVRLVFNLVKDPIEVEETYYTDGSCNKQSKEGKAGYITDRGKDIVKVLTTTNQQAELEAIYHGIEDSGPKRNIIVELQVCYGNNNRFPTESESRLVNQIIEEMIKVRVYVAWVPALEGIGGNQEIGPLVSQGFRQVLFLEKIEPAQEEHDKYHSNVKELVFKFGLPRIVARQIVDTCDKCHQKGEAIHGQVNSDLGTWQMDCTHLEGKIVIVAVHVASGFIEAEVIPQETGRQHYFLLKLAGRWPYLHIYTHSNGANFASQEVKMVTWWAGIEAHLWVPYNPQSQGVVEAMNHHLKNQIDRIREQANSVETIVLMAVHCMNFKRRGGIGDMTPAERLINMITTEQEIQFQQSKNSKFKNFRVYYREGRDQLWKGPGELLWKGEGAVILKVGTDIKVVPRRKAKIIKDYGGGKEVDSSSHMEDTGEAREVA

Annotated regions:
phrase: VYYREGRDQLWKGPGELLWKGEGAVILKVGTDIKVVPRRKAKI
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: WRRPVVTAHIEGQPVEVLLDTGADDSIVTGIELGPHYTPKIVGGIGGFINTKEYKNVEIEVLGKRIKRTIMTGDTPINIFGRNLLTALGMS
type: DOMAIN
name: Retropepsins
description: Retropepsins

phrase: VTAHIEGQPVEVLLDTGADDSIVTGIELGPHYTPKIVGGIGGFINTKEYKNVEIEVLGKRIKRTIMTGDTPINIFGRNLL
type: DOMAIN
name: Retropepsin-like_cat_dom
description: Retropepsin-like catalytic domain

phrase: AQEEHDKYHSNVKELVFKFGLPRIVARQIVDTCDKC
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: IEVEETYYTDGSCNKQSKEGKAGYITDRGKDIVKVLTTTNQQAELEAIYHGIEDSGPKRNIIVELQVCYGNNNRFPTESESRLVNQIIEEMIKVRVYVAWVPALEGIGGNQEIGPLVSQGF
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: FRVYYREGRDQLWKGPGELLWKGEGAVILKVGTDIKVVPRRKAKIIK
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: KCWNCGKEGHSARQC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: RNSVLSGKKADELEKI
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: RPGGKKKYMLKHVVWAAN
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: DRFGLAESLLENKEG
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: TGSENLKSLYNTVCVIWCI
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: HAEEKVKHTEEAK
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: GCWKCGKMDHVMAKCP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: KCWNCGKEGHSARQCR
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: MYNPTNILDVKQGPKEPFQSYVDRFYKSLRAEQTDAAVKNWMTQTLLIQNANPDCKLVLKGLGVNPTLEEMLT
type: DOMAIN
name: Gag_p24_C
description: Retroviral nucleocapsid Gag protein p24, C-terminal domain

phrase: EKIEPAQEEHDKYHSNVKELVFKFGLPRIVARQIVDTCDKC
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: LQKIELPQRETWTVNDIQKLVGVLNWAAQIYPGIKTKHLCRLIRGKMTLTEAVQWTEMAEA
type: DOMAIN
name: RVT_thumb
description: Reverse transcriptase thumb

phrase: IKCWNCGKEGHSARQC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: ETYYTDGSCNKQSKEGKAGYITDRGKDIVKVLTTTNQQAELEAIYHGIEDSGPKRNIIVELQVCYGNNNRFPTESESRLVNQIIEEMIKVRVYVAWVPALEGIGGNQEIGPLVSQ
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: VEVLLDTGADDSIVTGIELGPHYTPKIVGGIGGFINTKEYKNVEIEVLGKRIKRTIMTGDTPINIFGRN
type: DOMAIN
name: Peptidase_A2_cat
description: Peptidase A2A, retrovirus, catalytic

phrase: VLLDTGADDSI
type: ACTIVE_SITE
name: Aspartic_peptidase_AS
description: Aspartic peptidase, active site

phrase: YYQEGKPLEATVIKSQDNQWTYKIHQEDKILKVRKFAKIKNTHTNGVRLLAHVIQKIGKEAIVIVGQVPKFHLPVERDVWEQWWTDYWQVTWIPEWDFIS
type: DOMAIN
name: RVT_connect
description: Reverse transcriptase connection

phrase: CWKCGKMDHVMAKCP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: IKKKDKNKWRMLIHFRELNRVTQELYRSPIRIPHPAGLAKRKRITVLDIGDAYFSIPLDEEFRQYTAFTLPSVNNAEPGKRYIYKVLPQGWKGSPAIFQYTMRHVLEPFRKANPDVTLVQYMDDILIASDRTDLEHDRVVLQLKELLNSIGFSTPEEKFQKDPPFQWMGYE
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: QVNSDLGTWQMDCTHLEGKIVIVAVHVASGFIEAEVIPQETGRQHYFLLKLAGRWPYLHIYTHSNGANFASQEVKMVTWWAGIEAHLWVPYNPQSQGVVEAMNHHLKNQIDRIREQANSVETIVLMAVHCMNFKRRGGIGDMTPAERLINM
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: GARNSVLSGKKADELEKIRLRPGGKKKYMLKHVVWAANELDRFGLAESLLENKEGCQKILSVLAPLVPTGSENLKSLYNTVCVIWCIHAEEKVKHTEEAKQIVQRHLVVETGTAETMPKTSRPTAPSSG
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: DGQLEEAPPTNPYNTPTFAIKKKDKNKWRMLIHFRELNRVTQELYRSPIRIPHPAGLAKRKRITVLDIGDAYFSIPLDEEFRQYTAFTLPSVNNAEPGKRYIYKVLPQGWKGSPAIFQYTMRHVLEPFRKANPDVTLVQYMDDILIASDRTDLEHDRVVLQLKELLNSIGFSTPEEKFQKDPPFQWMGYE
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain