nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MKVDFLVIKVEKLSSLRVFYFFLFFFESKYVEDQKIKDAKLLQLDFDTIRLATNDFSPYNHLGEGGFGAVYKGVLDSGEEIAVKRLSMKSGQGDNEFVNEVSLVAKLQHRNLVRLLGFCFKGEERLLIYEFFKNTSLEKFIFDSDRRMILDWEKRYRIISGVARGLLYLHEDSHFKIIHRDMKASNVLLDDAMNPKIADFGMVKLFNTDQTSQTMFTSKVAGTYGYMAPEYAMSGQFSVKTDVFSFGVLVLEIIKGKKNNWSPEEQSSLFLLSYVWKCWREGEVLNIVDPSLIETRGLSDEIRKCIHIGLLCVQENPGSRPTMASIVRMLNANSFTLPRPLQPAFYSGVVDSSSRDNNHTRNPRIASLNDVTITELDPR

Annotated regions:
phrase: FSPYNHLGEGGFGAVYKGVLDSGEEIAVKRLSMKSGQGDNEFVNEVSLVAKLQHRNLVRLLGFCFKGEERLLIYEFFKNTSLEKFIFDSDRRMILDWEKRYRIISGVARGLLYLHEDSHFKIIHRDMKASNVLLDDAMNPKIADFGMVKLFNTDQTSQTMFTSKVAGTYGYMAPEYAMSGQFSVKTDVFSFGVLVLEIIKGKKNNWSPEEQSSLFLLSYVWKCWREGEVLNIVDPSLIETRGLSDEIRKCIHIGLLCVQENPGSRPTMASIVRMLNANSF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: NHLGEGGFGAVYKGVLDSGEEIAVKRLSMKSGQGDNEFVNEVSLVAKLQHRNLVRLLGFCFKGEERLLIYEFFKNTSLEKFIFDSDRRMILDWEKRYRIISGVARGLLYLHEDSHFKIIHRDMKASNVLLDDAMNPKIADFGMVKLFNTDQTSQTMFTSKVAGTYGYMAPEYAMSGQFSVKTDVFSFGVLVLEIIKGKKNNWSPEEQSSLFLLSYVWKCWREGEVLNIVDPSLIETRGLSDEIRKCIHIGLLCVQENPGSRPTMASIVRM
type: DOMAIN
name: Ser-Thr/Tyr_kinase_cat_dom
description: Serine-threonine/tyrosine-protein kinase, catalytic domain

phrase: FSPYNHLGEGGFGAVYKGVLDSGEEIAVKRLSMKSGQGDNEFVNEVSLVAKLQHRNLVRLLGFCFKGEERLLIYEFFKNTSLEKFIFDSDRRMILDWEKRYRIISGVARGLLYLHEDSHFKIIHRDMKASNVLLDDAMNPKIADFGMVKLFNTDQTSQTMFTSKVAGTYGYMAPEYAMSGQFSVKTDVFSFGVLVLEIIKGKKNNWSPEEQSSLFLLSYVWKCWREGEVLNIVDPSLIETRGLSDEIRKCIHIGLLCVQENPGSRPTMASIVRMLNANSF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: IIHRDMKASNVL
type: ACTIVE_SITE
name: Ser/Thr_kinase_AS
description: Serine/threonine-protein kinase, active site

phrase: LGEGGFGAVYKGVLDSGEEIAV
type: BINDING_SITE
name: Protein_kinase_ATP_BS
description: Protein kinase, ATP binding site
Protein sequence:
MVHHYHRRRGLQATHHYAIGSRVGTSLFQVLLLLLSLWLPVLDNSGFALACGPGRGAGRRPNLRKLTPLVFKQHVPNVSENTLPASGLSEGRITRYDSRFRDLVPNYNTDIIFKDEEGSGADRLMTQRCKEKLNTLAISVMNQWPGVKLRVVEGWDEEGMHAIDSLHYEGRAVDVTTSDRDRSKYGMLARLAVEAGFDWVYYESRSHIHCSVKSESSSAGKSGGCFPGRSLVRTEDGSTKRLDDVHLGDRIAAVDSRGDVVYSEVIAFLDRSPSERRQFIRMTTKSGRVLTLTPAHLVPVEGGSMFAANVQPGDKILVSDTDAANEVDSRLRWDSVNETKLVIEEGVYAPLTMEGNLLVDDVVASCYAIVNSQSLAHYSFLPVRIWHSVTSFFLQRLDDVKHFATRHNDMSRTESTMRGEQEGIYWYASMLYSLSFYVLPSKMIYN

Annotated regions:
phrase: CFPGRSLVRTEDGSTKRLDDVHLGDRIAAVDSRGDVVYSEVIAFLDRSPSERRQFIRMTTKSGRVLTLTPAHLVP
type: PTM
name: Intein_N
description: Intein N-terminal splicing region

phrase: CGPGRGAGRRPNLRKLTPLVFKQHVPNVSENTLPASGLSEGRITRYDSRFRDLVPNYNTDIIFKDEEGSGADRLMTQRCKEKLNTLAISVMNQWPGVKLRVVEGWDEEGMHAIDSLHYEGRAVDVTTSDRDRSKYGMLARLAVEAGFDWVYYESRSHIHC
type: DOMAIN
name: Hedgehog_signalling_dom
description: Hedgehog, N-terminal signalling domain

phrase: GGCFPGRSLVRTEDGSTKRLDDVHLGDRIAAVDSRGDVVYSEVIAFLDRSPSERRQFIRMTTKSGRVLTLTPAHLVPVEGGSMFAANVQPGDKILVS
type: DOMAIN
name: Hint_dom_N
description: Hint domain N-terminal

phrase: KSESSSAGKSGGCFPGRSLVRTEDGSTKRLDDVHLGDRIAAVDSRGDVVYSEVIAFLDRSPSERRQFIRMTTKSGRVLTLTPAHLVPVEGGSMFAANVQPGDKILVSDTDAANEVDSRLRWDSVNETKLVIEEGVYAPLTMEGNLLVDDVVASCYAIVNSQSLAHYSFLPVRIWHSVTSFFLQRLDDVKHFATRHNDMSRTESTMRGEQEGIYWYASMLYSLSFYV
type: DOMAIN
name: Hedgehog_Hint
description: Hedgehog protein, Hint domain

phrase: DSRLRWDSVNETKLVIEEGVYAPLTMEGNLLVDDVVASCYAIVN
type: DOMAIN
name: Hint_dom_C
description: Hint domain C-terminal
Protein sequence:
HINAQIMQLHHSEHHAAYVNNLNVVEEKYQEALKKGDVTAQVALQPALKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFEKFKEKLTAVSVGVQGSGWGWLGFNKEQGRLQIAACSNQDPLQGTTGLVPLLGIDV

Annotated regions:
phrase: HINAQIMQLHHSEHHAAYVNNLNVVEEKYQEALKKGDVTAQVALQPALKFNGGGHINHSIFWTNL
type: DOMAIN
name: Mn/Fe_SOD_N
description: Manganese/iron superoxide dismutase, N-terminal

phrase: PKGELLEAIKRDFGSFEKFKEKLTAVSVGVQGSGWGWLGFNKEQGRLQIAACSNQDPLQGTTGLVPLLGID
type: DOMAIN
name: Mn/Fe_SOD_C
description: Manganese/iron superoxide dismutase, C-terminal
Protein sequence:
MTQMEMARKGVVSDEMKKVAEYEGVDVEIVRQKLAEGRAVLPKNKLHRIERPMIVGEGFSVKVNANIGTSQGFSSLEEEKEKARVAIEYGADSLMVLSTWGDLREIRRAIVEMSPVPVGSVPIYDSAVRSYQMKKNVVDFSEKDFFDMVIAHAEDGIDFMTIHVGVTRRVLDRIKSSRRVLKIVSRGGAIIAGWMIKNNKENPFYEHFDELLDIAKDYDITLSLGDGMRPGAVVDASDAQQFEELFVMGELVERAREKGVQVMLEGPGHVPLNEVEMNVRLMKKIGKGAPIFLLGPLPTDRAMGYDHIACAIGGALAGYYGADFLCYVTPSEHISLPDVEDVREGVIASKIAAIVADVARGNKKAWELEKKMALARKNFDWETMFSLSLGKDVAKKKYEERPYPDKGCSMCGPFCAIKIAEEFS

Annotated regions:
Protein sequence:
MKVAIVGVSGAVGQEFLRVLEERNFPLDELILFGSSRSAGKKYLFREREIEVKLLQHNDDFKGVDIAFTSAGGGTAEEYADTITRYGTLMIDNSSAFRMKENIPLVVPEVNAKDAENHPLNIIANPNCTTIQMVVALNALEQISHIRRAYVSTYQAASGAGSAAMDELYNQYRQTLAKEKVSVEKFPYQLAFNLIPQVDVFTENGYTKEEMKMYNETRKIMHSDIQVSATCVRVPALRAHSESIWIETERPISVEEARAAFSKAKGIVLQDNPAQKEYPMPLFVSQKDPVYVGRIRKDLTNENGLTFWVVGDQIKKGAALNAVQIAEYLLTKR

Annotated regions:
phrase: KVAIVGVSGAVGQEFLRVLEERNFPLDELILFGSSRSAGKKYLFREREIEVKLLQHNDDFKGVDIAFTSAGGGTAEEYADTITRYGTLMIDNSSAFRMKENIPLVVPEVNAKDAE
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: ALEQISHIRRAYVSTYQAASGAGSAAMDELYNQYRQTLAKEKVSVEKFPYQLAFNLIPQVDVFTENGYTKEEMKMYNETRKIMHSDIQVSATCVRVPALRAHSESIWIETERPISVEEARAAFSKAKGIVLQDNPAQKEYPMPLFVSQKDPVYVGRIRKDLTNENGLTFWVVGDQ
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: KVAIVGVSGAVGQEFLRVLEERNFPLDELILFGSSRSAGKKYLFREREIEVKLLQHNDDFKGVDIAFTSAGGGTAEEYADTITRYGTLMIDNSSAFRMKENIPLVVPEVNAKDAEN
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MRVMGIRKNCQHLWRWGTLLLGMLMICSAAENLWVTVYYGVPVWKEAITTLFCASDAKAYDTEAHNIWATHACVPTDPNPQEVVLENVTENFNMWKNNMVEQMQEDIISLWDQSLKPCVKLTPLCVTLNCTNLKNTTDISSNTSSTTGGEEMKNCSFNITTSIKTKVKDYALFYKIDLVQIDNSSSYRLMKCNTSIITQACPKISFEPIPIHYCTPAGFAILKCNNKTFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSSNFTDNAKIIIVQLNKSVEINCTRPNNNTRKSIPIGPGRAWYTTGQIIGNIRQAHCNISRTEWNNTLKQITEKLREQFGNKTIVFNRSSGGDPEVEMHSFNCGGEFFYCDTTQLFNSTWNITSTRNDTSTGNETITLPCKIKQVVNMWQEVGKAMYAPPIAGKITCSSNITGLLLTRDGGKNNDSNTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRAKRRVVQREKRAVGTIGAMFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQRNLLMAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNVSWSNKSLDEIWNNMTWMEWEREINNYTREIYTLIEESQNQQEKNELELLELDKWASLWNWFDITKWLWYIKIFIMIVGGLVGLRIVFAVLSIVNRVRQGYSPLSLQTHLPTQRGPGRPEGIEEEGGEQDRDRSERLVHGLLTLIWVDLRSLCLFSYHRLRDL

Annotated regions:
phrase: MGAASITLTVQARQLLSGIVQQQRNLLMAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNVSWSNKSLDEIWNNMTWMEWEREINNYTREIYTLIEESQNQQEKNELELLELDKWASLWNWFDITKWLWYIKIFIMIVGGLVGLRIVFAVLSIVNRVRQGYSPLSL
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: ISSNTSSTTGGEEMKNCSFNITTSIKTKVKDYALFYKIDLVQIDNSSSYRLMKCNTSIITQACPKISFEPIPIHYCTPAGFAILKCNNKTFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEEIVIRSSNFTDNAKIIIVQLNKSVEINCTRPNNNTRKSIPIGPGRAWYTTGQIIGNIRQAHCNISRTEWNNTLKQITEKLREQFGNKTIVFNRSSGGDPEVEMHSFNCGGEFFYCDTTQLFNSTWNITSTRNDTSTGNETITLPCKIKQVVNMWQEVGKAMYAPPIAGKITCSSNITGLLLTRDGGKNNDSNTTETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRAKRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: LWVTVYYGVPVWKEAITTLFCASDAKAYDTEAHNIWATHACVPTDPNPQEVVLENVTENFNMWKNNMVEQMQEDIISLWDQSLKPCVKLTPLCVTLNCTNLKNTTDISSNTSST
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: VQARQLLSGIVQQQRNLLMAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNVSWSNKSLDEIWNNMTWMEWEREINNYTREIYTLIEESQNQQEK
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MSHADQPPGPEQKQPGAPRPAQVRPVPPAELAARLGVEPPAPDAAPVTGITHDSRAVRRGDLYAALPGARFHGADFAPQAAELGAAAILTDPAGAERAAATGLPVLTVEDPRSRMGDLAAEIYGRPGGSLLQIGITGTSGKTTTAYLIEGGLRAVHGDRTGLIGTVESRIGDERLKSERTTPEATDLQALFAVMRERGIEALVMEVSSHALVLGRVDGAVFDVAVFNNLSPEHMEFHSGMEDYFQAKAQLFTPRRSRAGVVNIDDEYGRRLVRESQVPVTTFSAEGHPDADWRAEHVVTGPLRSTFTVAGPGGVRIEAASPLPGPFNVANALAAITALAVAGIDPQTAAQGVAAVPGVPGRLERVDAGQPYLAVVDYAHKTDAVESVLRALRKVTKGSLHIVLGCGGDRDETKRGPMGAAAARLADTAVLTSDNPRSEDPLAILTAMLAGAAGVPAHERGHVVVEPDRAAAIATAVALARPDDTVLVAGKGHEQGQDIAGVVRPFDDRQVLRAAIERAAATPAQEKDQDQL

Annotated regions:
phrase: VTGITHDSRAVRRGDLYAALPGARFHGADFAPQAAELGAAAILTDPAGAERAAATGLPVLTVEDPRSRMGDLAAE
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: ITGTSGKTTTAYLIEGGLRAVHGDRTGLIGTVESRIGDERLKSERTTPEATDLQALFAVMRERGIEALVMEVSSHALVLGRVDGAVFDVAVFNNLSPEHMEFHSGMEDYFQAKAQLFTPRRSRAGVVNIDDEYGRRLVRESQVPVTTFSAEGHPDADWRAEHVVTGPLRSTFTVAGPGGVRIEAASPLPGPFNVANALAAIT
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRLERVDAGQPYLAVVDYAHKTDAVESVLRALRKVTKGSLHIVLGCGGDRDETKRGPMGAAAARLADTAVLTSDNPRSEDPLAILTAMLAGAAGVPAHERGHVVVEPDRAAAIATAVALARPDDTVLVAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MPAYSTVRVGKKYSPSFKVYVTQDGKIVSPFHDIPLYMSGNREIVSVVNEIPRFENGKFEINKEEAFNPIKQDIKKGWPRFVKNVFPMKGYLWNYGALPQTWENPHEVDRHTGARGDNDPLDVIEIGRKRKEVGEVYQAKVLGSIALVDEGECDWKVVVIDVNDEKAKEINDIEDVRKVYEGLLEQTIFWFKNYKVPDGKPKNNFALDGKYMDKKFTVGIIKSAYENWCGMINSKSDTNICKENSTLMDKVDSPAIIQEDLSDEEVPECVHQFEFIK

Annotated regions:
Protein sequence:
MLVVEVANGRSLVWGAEAVQALRERLGVGGRTVGALPRGPRQNSRLGLPLLLMPEEARLLAEIGAVTLVSAPRPDSRHHSLALTSFKRQQEESFQEQSALAAEARETRRQELLEKITEGQAAKKQKLEQASGASSSQEAGSSQAAKEDETSDGQASGEQEEAGPSSSQAGPSNGVAPLPRSALLVQLATARPRPVKARPLDWRVQSKDWPHAGRPAHELRYSIYRDLWERGFFLSAAGKFGGDFLVYPGDPLRFHAHYIAQCWAPEDTIPLQDLVAAGRLGTSVRKTLLLCSPQPDGKVVYTSLQWASLQ

Annotated regions:
phrase: ELRYSIYRDLWERGFFLSAAGKFGGDFLVYPGDPLRFHAHYIAQCWAPEDTIPLQDLVAAGRLGTSVRKTLLLCSPQPDGKVV
type: DOMAIN
name: tRNA_intron_Endonuc_cat-like
description: tRNA intron endonuclease, catalytic domain-like

phrase: ELRYSIYRDLWERGFFLSAAGKFGGDFLVYPGDPLRFHAHYIAQCWAPEDTIPLQDLVAAGRLGTSVRKTLLLCSPQPDGKVVYTSLQ
type: DOMAIN
name: tRNA_intron_Endonuc_cat-like
description: tRNA intron endonuclease, catalytic domain-like
Protein sequence:
MQTLVLASHNKGKVAELKALLESFPVRVQGLDAYPGIGEIPETGETFEENAAIKAEAVCRLTGRIALADDSGLAVDFLGGAPGVYSARYSDPGATPERNNEKLLRELSDVPRDKRTARFICVMTAQAPCGETLTARGEWPGVIAETLQGQGGFGYDPVFFDPEAGMTAAQMEPAFKNQRSHRGLALRALLEGWKEFLDRVRAD

Annotated regions:
Protein sequence:
MHKLVLIRHGESTWNLENRFTGWTDVDLTPTGIEQAKNAGRLLKAEGYDFDLAYTSVLKRATRTLWHCLDEMDRTWLPVEHSWRLNERHYGALQGLNKADMAKQYGDAQVLVWRRSYDTPPPALEPTDPRCERGDIRYAGLAPEQVPLTECLKDTVARVLPYWNEAIAPTIRSGKRVLIAAHGNSIRALVKYLDGISDQDIVGLNIPNGIPLVYELDAELKPLRSYYLGDAEATAKAAAAVAAQGKA

Annotated regions:
phrase: LIRHGESTW
type: ACTIVE_SITE
name: PG/BPGM_mutase_AS
description: Phosphoglycerate/bisphosphoglycerate mutase, active site
Protein sequence:
MEAEESEKAATEQEPLKGTEQTLDAEEEQEESEDAACGSKKRVVPGIVYLGHIPPRFRPLHVRNLLSAYGEVGRVFFQAEDRFVRRKKKAAAAAGGKKRSYSKDYTEGWVEFRDKRIAKRVAASLHNTPMGARRRSPFRYDLWNLKYLHRFTWSHLSEHLAFERQVRRQRLRAEVAQAKRETDFYLQSVERGQRFLAADGDPARPDGSWTFAQRPTEQELRAQKAARPGGRERARLVTAQDKARSNKGLLARIFGAPPPSESMEGPSLVRDS

Annotated regions:
phrase: GIVYLGHIPPRFRPLHVRNLLSAYGEVGRVFFQAEDRFVRRKKKAAAAAGGKKRSYSKDYTEGWVEFRDKRIAKRVAASLHNTPMGARRRSPFRYDLWNLKYL
type: DOMAIN
name: ABT1/ESF2_RRM
description: ABT1/ESF2, RNA recognition motif
Protein sequence:
MRVKGIQMNWQHLWEWGTLILGLGIICSASNNLWVTVYYGVPVWEDADTPLFCASDAKAYSTESHNIWATHACVPTDPNPQEIPLNNVTENFNMWKNNMVEQMHEDIISLWDESLKPCVKLTPLCVTLTCNNVTNNSTVTNNSAVEKDKVEIKNCSFNITTEIKDKKKQEYALFYRLDIVPIEDNNNSSANNYRLINCNVSAIKQACPKVNFDPIPIHYCTPAGFAILKCRDEDFNGTGPCTNVSTVQCTDGIKPVVSTQLLLNGSLAKGQIKIRSENFTDNAKIIIVQLNKSIEINCTRPNNNTRKSIRFGPGQAFYATGDIIGDIRQAHCNVSRTEWNNTIRNVTEELKKIFTNKTISFKPSVGGDLEITTHSFNCRGEFFYCNTSGLFNSSNLSNSSNNETDIITLPCRIKQIVRMWQRVGQAMYAPPIEGNITCISNITGLLLTRDGGKTNSSNETFRPAGGDMRDNWRSELYKYKVVKIKPLGIAPTKARRRVVGREKRAVGIGAVLLGFLGTAGSTMGAAAITLTVQVRQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTNVPWNASWSNKTYEEIWENMTWIEWEREINNYTQQIYSLIEESQNQQEKNEQDLLALDKWASLWNWFDISNWLWYIRIFIMIVGGLIGLRIVFAVLSIINRVRQGYSPLSFQTPTHHQREPDRPEGIGGGGGEQDRDRSIRLVSGFLALAWDDLRSLCLFSYHRLRDFI

Annotated regions:
phrase: VQVRQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTNVPWNASWSNKTYEEIWENMTWIEWEREINNYTQQIYSLIEESQNQQEKNEQDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWEDADTPLFCASDAKAYSTESHNIWATHACVPTDPNPQEIPLNNVTENFNMWKNNMVEQMHEDIISLWDESLKPCVKLTPLCVTLTCNNVTNNSTVTN
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: VTNNSAVEKDKVEIKNCSFNITTEIKDKKKQEYALFYRLDIVPIEDNNNSSANNYRLINCNVSAIKQACPKVNFDPIPIHYCTPAGFAILKCRDEDFNGTGPCTNVSTVQCTDGIKPVVSTQLLLNGSLAKGQIKIRSENFTDNAKIIIVQLNKSIEINCTRPNNNTRKSIRFGPGQAFYATGDIIGDIRQAHCNVSRTEWNNTIRNVTEELKKIFTNKTISFKPSVGGDLEITTHSFNCRGEFFYCNTSGLFNSSNLSNSSNNETDIITLPCRIKQIVRMWQRVGQAMYAPPIEGNITCISNITGLLLTRDGGKTNSSNETFRPAGGDMRDNWRSELYKYKVVKIKPLGIAPTKARRRVVGREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: MGAAAITLTVQVRQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTNVPWNASWSNKTYEEIWENMTWIEWEREINNYTQQIYSLIEESQNQQEKNEQDLLALDKWASLWNWFDISNWLWYIRIFIMIVGGLIGLRIVFAVLSIINRVRQGYSPLSFQTP
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MDKFSQSPPLRDDLVRGSSLNWTKEKENILKGPFNYLESHPGKDIRSQLIAAFNAWLDVPEESLNVIRRVVAMLHTASLLIDDVEDNSQLRRGIPVAHNVFGTAQTINSANYVYFCALKELAILNNPAVIQIYTEELVNLHRGQGMDLFWRDTLTCPSEDDYLEMVGNKTGGLFRLAIKLMCAESPSHNAHPDPFQRNDYVPLVNTIGLLFQILDDYKNLSDTIYTQNKGLCEDLTEGKFSFPIIHAIRADPGNLVLINILKQKTTDDEVKKYAVAYMDRAGSFSYTRKVLRGLTKKALTQVDEVDAGRGRGEQMKTILEKLRVDRNHQRGVLTPAAGGASIA

Annotated regions:
phrase: LLIDDVEDNSQLRR
type: CONSERVED_SITE
name: Polyprenyl_synt_CS
description: Polyprenyl synthetase, conserved site

phrase: IGLLFQILDDYK
type: CONSERVED_SITE
name: Polyprenyl_synt_CS
description: Polyprenyl synthetase, conserved site
Protein sequence:
MKKTLGIILSISLAFSVLALPIFAAVDTTTSATVEAATPAAPATPAATAPAAAPSVDTSKIAAGTYYTVVSGDFFWQIAAKHGLTIDALAKLNPQIKNVNLIFPGQKILVKAEEAAAASTSTSTAAVAPAAKKLYQGIGMAANYRDNTARQKDHDNLNITTVAALFDDAGKIVKLQFDVVEILPDMFPGWMDPEAADKSFYKDAQANGFNWETKKEEGDAYGMKASAVSGKEWWEQMNFYEEYFKGKTVAEVQDWFAKYCDANGRPYKMAYPEKLTDADKAKVATFTEAEKKMLVDVTTGATMSLQDPHSRFIDALVKAYEVRKEVK

Annotated regions:
phrase: TYYTVVSGDFFWQIAAKHGLTIDALAKLNPQIKNVNLIFPGQKIL
type: DOMAIN
name: LysM_dom
description: LysM domain

phrase: TYYTVVSGDFFWQIAAKHGLTIDALAKLNPQIKNVNLIFPGQKIL
type: DOMAIN
name: LysM_dom
description: LysM domain

phrase: YTVVSGDFFWQIAAKHGLTIDALAKLNPQIKNVNLIFPGQKIL
type: DOMAIN
name: LysM_dom
description: LysM domain

phrase: YYTVVSGDFFWQIAAKHGLTIDALAKLNPQIKNVNLIFPGQKILV
type: DOMAIN
name: LysM_dom
description: LysM domain
Protein sequence:
MSEINISAVAVKELREKTGAGMMDCKKALIETSGNFEEAIDFLRKKGLAAAAKKAGRIASEGLTAAKVDGLTGVVIEVNSETDFVARNEQFQDLVKEIANLAVIAKTIDTLKTFKMQSGKSVEEEVIENIATIGENLTLRRMDVLEISEGAIGSYVHNEVVPNLGKISVLVGLVSNAKDKAKLEALAKQIAVHVAGNNPQSIDDSSLDQALVERERKVFFEKSKEEGKPDNIIAKMVEGRIRKFFSEVVLLQQNFLFEPKLTVAEVIKNAEKELGAEIKIAKFIRYELGEGIEHEEKNFADEVAAITQG

Annotated regions:
phrase: GVVIEVNSETDFVARNEQFQDLVKEIANLAVIAKTIDTLKTFKMQSGKSVEEEVIENIATIGENLTLRRMDVLEISEGAIGSYVHNEVVPNLGKISVLVGLVSNAKDKAKLEALAKQIAVHVAGNNPQSIDDSSLDQALVERERKVFFEKSKEEGKPDNIIAKMVEGRIRKFFSEVVLLQQNFLFEPKLTVAEVIKNAEKELGAEIKIAKFIRYELG
type: DOMAIN
name: Transl_elong_EFTs/EF1B_dimer
description: Translation elongation factor EFTs/EF1B, dimerisation

phrase: EVNSETDFVA
type: CONSERVED_SITE
name: Transl_elong_Ts_CS
description: Translation elongation factor Ts, conserved site

phrase: LREKTGAGMMDCKKA
type: CONSERVED_SITE
name: Transl_elong_Ts_CS
description: Translation elongation factor Ts, conserved site
Protein sequence:
MRKDRLLHLCLVLLLILLSASDSNSTEPQYMVLVPSLLHTEAPKKGCVLLSHLNETVTVSASLESGRENRSLFTDLVAEKDLFHCVSFTLPRISASSEVAFLSIQIKGPTQDFRKRNTVLVLNTQSLVFVQTDKPMYKPGQTVRFRVVSVDENFRPRNELIPLIYLENPRRNRIAQWQSLKLEAGINQLSFPLSSEPIQGSYRVVVQTESGGRIQHPFTVEEFVLPKFEVKVQVPKIISIMDEKVNITVCGEYTYGKPVPGLATVSLCRKLSRVLNCDKQEVCEEFSQQLNSNGCITQQVHTKMLQITNTGFEMKLRVEARIREEGTDLEVTANRISEITNIVSKLKFVKVDSHFRQGIPFFAQVLLVDGKGVPIPNKLFFISVNDANYYSNATTNEQGLAQFSINTTSISVNKLFVRVFTVHPNLCFHYSWVAEDHQGAQHTANRVFSLSGSYIHLEPVAGTLPCGHTETITAHYTLNRQAMGELSELSFHYLIMAKGVIVRSGTHTLPVESGDMKGSFALSFPVESDVAPIARMFIFAILPDGEVVGDSEKFEIENCLANKVDLSFSPAQSPPASHAHLQVAAAPQSLCALRAVDQSVLLMKPEAELSVSSVYNLLTVKDLTNFPDNVDQQEEEQGHCPRPFFIHNGAIYVPLSSNEADIYSFLKGMGLKVFTNSKIRKPKSCSVIPSVSAGAVGQGYYGAGLGVVERPYVPQLGTYNVIPLNNEQSSGPVPETVRSYFPETWIWELVAVNSSGVAEVGVTVPDTI

Annotated regions:
phrase: IHLEPVAGTLPCGHTETITAHYTLNRQAMGELSELSFHYLIMAKGVIVRSGTHTLPVESGDMKGSFALSFPVESDVAPIARMFIFAILPDGEVVGDSEKFEIENCLANKVDLSFSPAQSPPASHAHLQVAAAPQSLCALRAVDQSVLL
type: DOMAIN
name: A2M_N_BRD
description: Alpha-2-macroglobulin, bait region domain

phrase: LKFVKVDSHFRQGIPFFAQVLLVDGKGVPIPNKLFFISVNDANYYSNATTNEQGLAQFSINTTSISVNKLFVRVFTVHPNLCFHYSWVAEDH
type: DOMAIN
name: MG4
description: Macroglobulin domain MG4

phrase: IHLEPVAGTLPCGHTETITAHYTLNRQAMGELSELSFHYLIMAKGVIVRSGTHTLPVESGDMKGSFALSFPVESDVAPIARMFIFAILPDGEVVGDSEKFEIENCLANKVDLSFSPAQSPPASHAHLQVAAAPQSLCALRAVDQSVLL
type: DOMAIN
name: A2M_N_BRD
description: Alpha-2-macroglobulin, bait region domain

phrase: VFVQTDKPMYKPGQTVRFRVVSVDENFRPRNELIPLIYLENPRRNRIAQWQSLKLEAGINQLSFPLSSEPIQGSYRVVVQTESGGRIQHPFT
type: DOMAIN
name: MG2
description: Macroglobulin domain

phrase: MRKDRLLHLCLVLLLILLSASDSNSTEPQYMVLVPSLLHTEAPKKGCVLLSHLNETVTVSA
type: CONSERVED_SITE
name: TonB_box_CS
description: TonB box, conserved site

phrase: EFVLPKFEVKVQVPKIISIMDEKVNITVCGEYTYGKPVPGLATVSLCRKLSRVLNCDKQEVCEEFSQQLNSNGCITQQVHTKMLQI
type: DOMAIN
name: MG3
description: Macroglobulin domain MG3
Protein sequence:
MKKIKKDIRELSKKEIQEFFLSHNEPSFKGTQVYQWLWKKGVHDFDLMTNLSFGHRALLKTNFEIKHIKIDEYQRSIDGTIKNAVKLHDQFTVESVLIPTSKRSTACVSSQVGCSLDCIFCATAALKRIRNLNADEIYDQVVAMDNQSKLFFNRPLTNIVFMGMGEPLMNYKNVLSAINKIIDPEGLAMSPRRITLSTSGIPKMILKMAEDKVKFGLAVSLHSARQEVREKIMPFANKFPLTELSXALKFWYEYSNKPITYEYVIWEGINDKLEDIQALVKFCHQIPSKVNLIQYNPIDKSSMNEAPVEVXXSYLKALSKAKINVTYRRSRGEDIAAACGQLANKLQSN

Annotated regions:
phrase: SSQVGCSLDCIFCATAALKRIRNLNADEIYDQVVAMDNQSKLFFNRPLTNIVFMGMGEPLMNYKNVLSAINKIIDPEGLAMSPRRITLSTSGIPKMILKMAEDKVKFGLAVSLHSARQEVREKIMPFANKFPLTELSXALKFWYEYSNKPITYEYVIWEGINDKLED
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: IRELSKKEIQEFFLSHNEPSFKGTQVYQWLWKKGVHDFDLMTNLSFGHRALLKTNFE
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: TSKRSTACVSSQVGCSLDCIFCATAALKRIRNLNADEIYDQVVAMDNQSKLFFNRPLTNIVFMGMGEPLMNYKNVLSAINKIIDPEGLAMSPRRITLSTSGIPKMILKMAEDKVKFGLAVSLHSARQEVREKIMPFANKFPLTELSXALKFWYEYSNKPITYEYVIWEGINDKLEDIQALVKFCHQIPSKVNLIQYNPIDKSSMNEAPVEVXXSYLKALSKAKINVTYRRSRGE
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDTSDYAANIELAEAIAPKEPRAAATQEMTLVDTPNAKTIAELVEQFNLPIEKTVKTLLVKAVEGSSFPQVALLVRGDHELNEVKAEKLPQVASPLTFATEEEIRAVVKAGPGSLGPVNMPIPVVIDRTVAAMSDFAAGANIDGKHYFGINWDRDVATPEVADIRNVVAGDPSPDGQGRLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCYGIGVTRVVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLVKQIKG

Annotated regions:
phrase: DAEVISHQLMLRAGMIRKLASGLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDTSDYAANIELAEAIAPKEPRAAATQEMTLVDTPNAKTIAELVEQFNLPIEKTVKTLLVKAVEGSSFPQVALLVRGDHELNEVKAEKLPQVASPLTFATEEEIRAVVKAGPGSLGPVNMPIPVVIDRTVAAMSDFAAGANIDGKHYFGINWDRDVATPEVADIRNVVAGDPSPDGQGRLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCYGIGVTRVVAAAIE
type: DOMAIN
name: ProRS_core_prok
description: Prokaryote proline-tRNA ligase core domain

phrase: GLYTWLPTGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDTSDYAANIELAEAIAPKEPRAAATQEMTLVDTPNAKTIAELVEQFNLPIEKTVKTLLVKAVEGSSFPQVALLVRGDHELNEVKAEKLPQVASPLTFATEEEIRAVVKAGPGSLGPVNMPIPVVIDRTVAAMSDFAAGANIDGKHYFGINWDRDVATPEVADIRNVVAGDPSPDGQGRLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCYGIGVTRVVAAAIEQNYDERGIVW
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: PFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYL
type: DOMAIN
name: ProRS_anticodon_short
description: Proline--tRNA ligase, anticodon binding domain

phrase: TPNAKTIAELVEQFNLPIEKTVKTLLVKAVEGSSFPQVALLVRGDHELNEVKAEKLPQVASPLTFATEEEIRAVVKAGPGSLGPVNMPIPVVIDRTVAAMSDFAAGANIDGKHYFGINW
type: DOMAIN
name: YbaK/aa-tRNA-synth-assoc-dom
description: YbaK/aminoacyl-tRNA synthetase-associated domain

phrase: QVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLLDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYLV
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: FVDRGERPFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGEDDVVFSDTSDYAANIELAEAIAPKEPRAAATQEMTLVDTPNAKTIAELVEQFNLPIEKTVKTLLVKAVEGSSFPQVALLVRGDHELNEVKAEKLPQVASPLTFATEEEIRAVVKAGPGSLGPVNMPIPVVIDRTVAAMSDFAAGANIDGKHYFGINWDRDVATPEVADIRNVVAGDPSPDGQGRLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCYGIGVTRVVAAAIEQ
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
Protein sequence:
MRATEIKRNCQHSCWRWGTMLLGMLMICSAKEDEFWVTVYYGVPVWKETTTTLFCASDAKAYDTEAHNIWATHACVPTDPDPQEVELVNVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVILNCTNYNATKTNTTSNNSSEWENMRGEIQNCSFNITTGIEKKMRREYAIFNKLDIVPINNNNTSYMLVNCNTSVIRQACPKTTFEPIPIHYCTPAGFALLKCKDKEFNGSGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEGEIIIRSENITNNGKTIIIQLNEAVEINCTRPNNNTRKGIHMGWGKAFYATGEIIGNIRQAHCNISEARWNNTLKGIVTKLREKFNNKTIIFNQSSGGDPEVVMFHFNCGGEFFYCDSTQLFNSTWLFNDTRNGTDIEGNETITLPCRIKQIINRWQEVGKAIYAPPIEGQIRCTSNITGLLLTRDGGNSGTETFRPGGGDMRDNWRSELYKYKVVKIEPLGIAPTKAKRRVVQREKRAVGTIEAMFLGFLGAAGSTMGAASVTLTVQARLLLSGIVQQQNNLLKAIEAQQHMLQLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICTTAVPWNSSWSNKNLSTIWDNMTWMEWEREIDNYTGLIYKLLEESQNQQEKNEQELLALDKWANLWNWFDISKWLWYIRIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQTRLPAERGPDRPEGIGEEGGDKDRDRSRRLVHGFLALVWDDLRSLCLFSYHH

Annotated regions:
phrase: VQARLLLSGIVQQQNNLLKAIEAQQHMLQLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICTTAVPWNSSWSNKNLSTIWDNMTWMEWEREIDNYTGLIYKLLEESQNQQEKNEQELLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASVTLTVQARLLLSGIVQQQNNLLKAIEAQQHMLQLTVWGIKQLQARVLAVERYLRDQQLLGIWGCSGKLICTTAVPWNSSWSNKNLSTIWDNMTWMEWEREIDNYTGLIYKLLEESQNQQEKNEQELLALDKWANLWNWFDISKWLWYIRIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQ
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: WVTVYYGVPVWKETTTTLFCASDAKAYDTEAHNIWATHACVPTDPDPQEVELVNVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVILNCTNYNATKTNTTSNNSSEWENMRGEIQNCSFNITTGIEKKMRREYAIFNKLDIVPINNNNTSYMLVNCNTSVIRQACPKTTFEPIPIHYCTPAGFALLKCKDKEFNGSGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEGEIIIRSENITNNGKTIIIQLNEAVEINCTRPNNNTRKGIHMGWGKAFYATGEIIGNIRQAHCNISEARWNNTLKGIVTKLREKFNNKTIIFNQSSGGDPEVVMFHFNCGGEFFYCDSTQLFNSTWLFNDTRNGTDIEGNETITLPCRIKQIINRWQEVGKAIYAPPIEGQIRCTSNITGLLLTRDGGNSGTETFRPGGGDMRDNWRSELYKYKVVKIEPLGIAPTKAKRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MQRQSRKKVSKPKSLSSSLKQSSLTSFFVSKKNATTQSPNNNSTVNIKQHSSGPLTKLEKKNTILVEENIQRNKSYANNENITADSISAITSNNGTTIGSRFFSLSQRSSQNTLDNDPFGEDEPLNTQAKIMKLKQKTNVENLFNNKSRTSSSGLISLSRNNSGFDDIKYNPSFTYKNSISNSNGTSPKNKDYSSSSENVSPSVDLKSILSNKYQKDNDTYKKFKKDLRGKLSSTLRNKSKKVEKSVTLSREQQKVVDYIINDKLNIFYTGSAGTGKSVVLRTVIEKLKSIYGRDAIAITASTGLAAVNIGGITINKFCGFGIGKGSNEKLASMVKNNRNSIERWNRTKVLVIDEISMIDGDFLDKLDYVGRAVRGTPTKPFGGVQVVMTGDFFQLPPVPDRFSKKQPKFCFESKVWQTAIKKTVLLNKVFRQHDNELIDMLNAVRYGDGLSSSMINFIKSLEREVVYEDGIQPTELYPTRMEVEFANNTRLRSLPGMEVRFIARDMVFDIENDTKLLDNSFLVEKELLLREDAQVMMVKNIDDTLVNGTVGIVLCFTTDLLYTKIVLQRKQGAKSLNNELIDKLKFLSKAIGNPNFRYGEDYENFFTALVGDNEKKLWESFIDVAIREKLDDRLPIVRFSTNSGTDSRDELVNFDEFTLEKPKMASRWRNNIDQQAVNGASNTISRSQLPLILCWAVSIHKAQGQTIERLKVNLKKIFEVGQIYVALSRAVSKETLQIQNFDPRKIRVNKNVKDFYKALEKL

Annotated regions:
phrase: LSREQQKVVDYIINDKLNIFYTGSAGTGKSVVLRTVIEKLKSIYGRDAIAITASTGLAAVNIGGITINKFCGFGIGKGSNEKLASMVKNNRNSIERWNRTKVLVIDEISMIDGDFLDKLDYVGRAVRGTPTKPFGGVQVVMTGDFFQLPPVPDRFSKKQPKFCFESKVWQTAIKKTVLLNKVFRQHDN
type: DOMAIN
name: DNA_helicase_pif1-like_DEAD
description: DNA helicase Pif1-like, DEAD-box helicase domain

phrase: LDNSFLVEKELLLREDAQVMMVKNIDDTLVNGTVGIV
type: DOMAIN
name: Pif1-like_2B_dom
description: DNA helicase Pif1-like, 2B domain
Protein sequence:
MGNKWSKGWPAVRERMRXTEGAAXGVGAASXDLDKHGALTTSNTXTXNAAXAWLEAQEEEXVGFPVXPQVPLRPMTYKGAFDLGFFLKEKGGLDGLIYSXKRQEILDLWVYHTQGYFPDWQNYTPGPGXRXPLTFGWXFKLVPVDPREVEEANTGENNCLLHPXSLHGMEDEHGEVLMWXFDSSLARRHLARELHPEYYKDC

Annotated regions: