nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MHYKLLFAAAAASLASAVSAAGVVGAAEGFAHGVTGGGSASPVYPTTTDELVSYLGDNEPRVIILDRTFDFTGTEGTETTTGCAPWGTASQCQVAINLHSWCDNYQASAPKVSVTYDKAGILPITVNSNKSIVGQGTKGVIKGKGLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRSDYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNLSGRMPKVQGNTLLHAVNNLFHNFDGHAFEIGTGGYVLAEGNVFQDVNTVVETPISGQLFSSPDANTNQQCASVFGRSCQLNAFGNSGSMSGSDTSIISKFAGKTIAAAHPPGNIAQWTMKNAGQGK

Annotated regions:
phrase: AINLHSWCDNYQASAPKVSVTYDKAGILPITVNSNKSIVGQGTKGVIKGKGLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRSDYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNLSGRMPKVQGNTLLHAVNNLFHNFDGHAFEIGTGGYVLAEGNVFQDVNT
type: DOMAIN
name: Pec_lyase
description: Pectate lyase

phrase: LPITVNSNKSIVGQGTKGVIKGKGLRVVSGAKNVIIQNIAVTDINPKYVWGGDAITVDDSDLVWIDHVTTARIGRQHIVLGTSADNRVTISYSLIDGRSDYSATCNGHHYWGVYLDGSNDMVTLKGNYFYNLSGRMPKVQGNTLLHAVNNLFHNFDGHAFEIGTGGYVLAEGNV
type: DOMAIN
name: Pec_lyase
description: Pectate lyase
Protein sequence:
MKYVGAHVSAAGGLANAAIRAAEIEATAFALFTKNQRQWRAAPLTPEIINDFKAACEKYNFGPGQILPHDSYLINLGHPVQEALDKSREAFLDELQRCEQLGLTLLNFHPGSHLMQIDEDACLARIAESINIALAQTEGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKTRVGVCIDTCHAFAAGYDLRSQEECEKTFAEFERIVGFKYLRGMHLNDAKSAFGSRVDRHHSLGEGNIGHDAFRFIMQDPRFDGIPMVLETVNPDIWAEEIAWLKAQQTAEQAA

Annotated regions:
phrase: GVCIDTC
type: BINDING_SITE
name: AP_endonuc_F2_Zn_BS
description: AP endonuclease 2, zinc binding site

phrase: RAAEIEATAFALFTKNQRQWRAAPLTPEIINDFKAACEKYNFGPGQILPHDSYLINLGHPVQEALDKSREAFLDELQRCEQLGLTLLNFHPGSHLMQIDEDACLARIAESINIALAQTEGVTAVIENTAGQGSNLGFKFEHLAAIIDGVEDKTRVGVCIDTCHAFAAGYDLRSQEECEKTFAEFERIVGFKYLRGMHLNDAKSAFGSRVDRHHSLGEGNIGHDAFRFIMQDPRFDGIPMVLETVNPDIWAEEIAWLK
type: DOMAIN
name: Xyl_isomerase-like_TIM-brl
description: Xylose isomerase-like, TIM barrel domain

phrase: HDSYLINL
type: BINDING_SITE
name: AP_endonuc_F2_Zn_BS
description: AP endonuclease 2, zinc binding site

phrase: MHLNDAKSAFGSRVDR
type: BINDING_SITE
name: AP_endonuc_F2_Zn_BS
description: AP endonuclease 2, zinc binding site
Protein sequence:
MVRYSKLAFRQLVRVYDVDVCFTPMIYAKNFIESEKCRSSELSVCEGDSPLIVQFATDDPFVLSEAAEMVYKCSTGVDLNCGCPKHDVRSKGFGSALLSKPELLADMVRQTRARIPDPDFSVSLKIRINHDIEKTVDLCRKAEAAGVTHLTVHGRTPSQRAEPIDIQALRIVKDSVSVPIIANGGITTREEALFLAEQTGVDGIMAANGLLDNPALFAGHEHTPSDCVENFMRLSREYGLDWLLYHQHLQYMLRPVFSAQQRRVFNELNGRLAIDHFLNNLLDI

Annotated regions:
phrase: MVRYSKLAFRQLVRVYDVDVCFTPMIYAKNFIESEKCRSSELSVCEGDSPLIVQFATDDPFVLSEAAEMVYKCSTGVDLNCGCPKHDVRSKGFGSALLSKPELLADMVRQTRARIPDPDFSVSLKIRINHDIEKTVDLCRKAEAAGVTHLTVHGRTPSQRAEPIDIQALRIVKDSVSVPIIANGGITTREEALFLAEQTGVDGIMAANGLLDNPALFAGHEHT
type: DOMAIN
name: DUS-like_FMN-bd
description: DUS-like, FMN-binding domain

phrase: VDLNCGCPKHDVRSKGFG
type: CONSERVED_SITE
name: tRNA_hU_synthase_CS
description: tRNA-dihydrouridine synthase, conserved site

phrase: MVRYSKLAFRQLVRVYDVDVCFTPMIYAKNFIESEKCRSSELSVCEGDSPLIVQFATDDPFVLSEAAEMVYKCSTGVDLNCGCPKHDVRSKGFGSALLSKPELLADMVRQTRARIPDPDFSVSLKIRINHDIEKTVDLCRKAEAAGVTHLTVHGRTPSQRAEPIDIQALRIVKDSVSVPIIANGGITTREEALFLAEQTGVDGIMAANGLLDNPALFAGHEHTPSDCVENFMRLSREYGLDWLLYHQHLQYMLR
type: DOMAIN
name: DUS-like_FMN-bd
description: DUS-like, FMN-binding domain
Protein sequence:
MCKDIKILAIESSCDETAAAVVVNGRKVLSNIISSQIDIHKKFGGVVPEIASRKHIENISLVVQDAIKEAGVELKDIDAVGVTYGPGLVGALLVGLQYAKGLAYSINKPLIGVNHIEGHISANFIQYPDLKPPFACLVVSGGHTFIVYMKDYGEFEVLGQTRDDAAGEAFDKIARAIGLGYPGGPKIQEMAKRGDESALQFPRAKFHDNSLDFSFSGVKSAVLNYLNTMKMQEKEINRADVAASFQKNVVDFLVDNTIKACKIKKIDRIAVAGGVASNSFLRETMVSRGRENGIDVLFPAPILCTDNAAMIGSAAYFEFKKGNIAPLDLNAIPNLKLGER

Annotated regions:
phrase: KDIKILAIESSCDETAAAVVVNGRKVLSNIISSQIDIHKKFGGVVPEIASRKHIENISLVVQDAIKEAGVELKDIDAVGVTYGPGLVGALLVGLQYAKGLAYSINKPLIGVNHIEGHISANFIQYPDLKPPFACLVVSGGHTFIVYMKDYGEFEVLGQTRDDAAGEAFDKIARAIGLGYPGGPKIQEMAKRGDESALQFPRAKFHDNSLDFSFSGVKSAVLNYLNTMKMQEKEINRADVAASFQKNVVDFLVDNTIKACKIKKIDRIAVAGGVASNSFLRETMVSRGRENGIDVLFPAPILCTDNAAMIGSAAYFEFKKGNIAPLDLNAIPNLKLG
type: DOMAIN
name: Gcp-like_dom
description: Gcp-like domain

phrase: KVLSNIISSQIDIHKKFGGVVPEIASRKHIENISLVVQDAIKEAGVELKDIDAVGVTYGPGLVGALLVGLQYAKGLAYSINKPLIGVNHIEGHISANFIQYPDLKPPFACLVVSGGHTFIVYMKDYGEFEVLGQTRDDAAGEAFDKIARAIGLGYPGGPKIQEMAKRGDESALQFPRAKFHDNSLDFSFSGVKSAVLNYLNTMKMQEKEINRADVAASFQKNVVDFLVDNTIKACKIKKIDRIAVAGGVASNSFLRETMVSRGRENGIDVLFPAPILCTDNAAMI
type: DOMAIN
name: Gcp-like_dom
description: Gcp-like domain
Protein sequence:
MSRSKSSGRWLQEHFNDQYVKDSQKDGYRSRASYKLIELNDKDKLIKSGQTVVDLGAAPGGWSQVAAQIVGDGGRVVASDILPMDSLAGVDFVQGDFTEEAVLEQLLELLGEAKADLVISDMAPNMSGIADVDQPKSMYLVELALDMAKTTLKIGGSFACKVFQGEGFDELVLACRECFQKVLVRKPSASRPRSREVYIVAKGYKG

Annotated regions:
phrase: YRSRASYKLIELNDKDKLIKSGQTVVDLGAAPGGWSQVAAQIVGDGGRVVASDILPMDSLAGVDFVQGDFTEEAVLEQLLELLGEAKADLVISDMAPNMSGIADVDQPKSMYLVELALDMAKTTLKIGGSFACKVFQGEGFDELVLACRECFQKVLVRKPSASRPRSREVYIVAKG
type: DOMAIN
name: RNA_MeTrfase_FtsJ_dom
description: Ribosomal RNA methyltransferase, FtsJ domain
Protein sequence:
MTNPSEGTTPLAFRYTPELANKIEGEWQNYWTDNGTFNAPNPVGDLAPADGKALPEDKLFVQDMFPYPSGAGLHVGHPLGYIATDVFARYNRMLGKNVLHTLGYDAFGLPAEQYAIQTGTHPRTTTMANIENMKRQLGALGLGHDSRRAVATTDPEFYKWTQWIFLQIFNSWFDAEQQKARPISELIPLLESGELKTKDGADYNALGDVEKQKAVDDYRLVYRSNSTVNWCPGLGTVLANEEVTADGRSERGNFPVFRKNLSQWMMRITAYSDRLIDDLELLDWTEKVKSMQRNWIGRSRGAEVDFSAEGETVTVFTTRPDTLFGATYMVLAPEHELVDVLLEKAGSYEGVDARWTNGQASPAEAVAAYRASIAAKSDLERQENKEKTGVFLGVYATNPVNGDQITVFIADYVLTGYGTGAIMAVPAHDERDYEFATVLGLPIKEVVAGGNIEEAAFTESGEAVNSANDNGLDINGLAKDEAIAKTIEWLEEKELGRGTIQYKLRDWLFARQRYWGEPFPIVYDENGQAHALPDSMLPVELPEVEDYKPVSFDPEDADSEPSPPLAKAREWVEVELDLGDGKKKYTRDTNVMPQWAGSSWYQLRYVDPSNDEQFCNIENERYWTGPRPETHGPNDPGGVDLYVGGVEHAVLHLLYARFWHKVLFDLGHVSSKEPYRRLYNQGYIQAFAYTDSRGVYVPADDVEEKDGKFFYQGEEVNQEYGKMGKSLKNAVAPDDICNNFGADTLRVYEMAMGPLDTSRPWATKDVVGAQRFLQRLWRLVVDENTGEVLTRDEVLTDDDNKQLHRTIAGVRDDYTNLRVNTVVAKLIEYVNYLTKTYPDTIPAGAVLPLIVMVSPIAPHIAEELWKKLGHDDTVTYEPFPTFEEKWLTDDEIELPVQVNGKVRGRITVAADASQEQVIEAALADEKVQEQISGKNLIKQIVVPGRMVNLVVK

Annotated regions:
phrase: RNWIGRSRGAEVDFSAEGETVTVFTTRPDTLFGATYMVLAPEHELVDVLLEKAGSYEGVDARWTNGQASPAEAVAAYRASIAAKSDLERQENKEKTGVFLGVYATNPVNGDQITVFIADYVLTGYGTGAIMAVPAHDERDYEFATVLGLPIKEVVAGGNIEEAAFTESGEAVNSANDNGLDIN
type: DOMAIN
name: Leu_tRNA-synth_edit
description: Leucyl-tRNA synthetase, editing domain

phrase: DMFPYPSGAGLHVGHPLGYIATDVFARYNRMLGKNVLHTLGYDAFGLPAEQYAIQTGTHPRTTTMANIENMKRQLGALGLGHDSRRAVATTDPEFYKWTQWIFLQ
type: DOMAIN
name: Methionyl/Leucyl_tRNA_Synth
description: Methionyl/Leucyl tRNA synthetase

phrase: PSGAGLHVGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: KQLHRTIAGVRDDYTNLRVNTVVAKLIEYVNYLTKTYPDTIPAGAVLPLIVMVSPIAPHIAEELWKKLGHDDTVTYEPFPTFEEKWLTDDEIELPVQVNGKVRGRITVAADASQ
type: DOMAIN
name: M/V/L/I-tRNA-synth_anticd-bd
description: Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
Protein sequence:
MPALSLIALLSLVSTAFARQWEVHPPQQQGRHWAQICSGNPFNRIRGCDRYGCGNYGASRQGKGEKHKGVDVICTDGSIVYAPFSGQLSGPIRFFHNGNAIDDGVQISGSGYCVKLVCIHPIRYHGQIQKGQQLGRMLPMQKVFPGIVSHIHVENCDQSDPTHLLRPIPDISPPFPQQDAHWAVVCAGNPTNEIRGCDKYGCGYFGAPRRNGKGEKHKGVDVICADGATVYAPFSGELSGPVKFFHNGNAIDDGVQIRGSGFCVKLLCIHPIRYNGRISKGQVLGRMLPMQRVFPGIISHIHVENCDRSDPTSNLERGKGESEMEV

Annotated regions:
Protein sequence:
MKLSDLFPLAENGETEILGMTSDSRKVQPGWLFAALKGSVHDGGKFVPQAVAQGAAAILSDGGIGAVSVPHVMADEPRRALALAAKRFYGEQPEFVVAVTGTNGKSSTVDFARQIWSRAGIKAASMGTLGAIGPAGKVDIGHTTPDPVTVSETMKALARQGVTHCAMEASSHGLEQHRLDGVDLSAVAFLNLTQDHLDYHATMEAYLDAKVRLFRDLAPRGIPAIVNADSDHREAVEETARKAGLQVVSFGWRGEDLWIDELMPKATGQTLFLYWKDVEQKPIELPLIGEFQTLNALAAAALCLSLGMEFPAVADGLANLKPVKGRLEFVGKTETGAAVFVDYAHTPDGLDVLLRAVRPHTAGRLKVIFGCGGDRDAKKRPIMGEIASRQADDVIVTDDNPRSEDPAKIRASVLGGATGAREIGDRAEAIHAVVRELKKGDTLVIAGKGHETGQIIGSQVLPFSDQDEALAALKGLVR

Annotated regions:
phrase: ILGMTSDSRKVQPGWLFAALKGSVHDGGKFVPQAVAQGAAAILSDGGIGAVSVPHVMADEPRRALALAAK
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: GRLEFVGKTETGAAVFVDYAHTPDGLDVLLRAVRPHTAGRLKVIFGCGGDRDAKKRPIMGEIASRQADDVIVTDDNPRSEDPAKIRASVLGGATGAREIGDRAEAIHAVVRELKKGDTLVIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: VTGTNGKSSTVDFARQIWSRAGIKAASMGTLGAIGPAGKVDIGHTTPDPVTVSETMKALARQGVTHCAMEASSHGLEQHRLDGVDLSAVAFLNLTQDHLDYHATMEAYLDAKVRLFRDLAPRGIPAIVNADSDHREAVEETARKAGLQVVSFGWRGEDLWIDELMPKATGQTLFLYWKDVEQKPIELPLIGEFQTLNALAAAA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central
Protein sequence:
MALSDSIGDFLARIRNAQLAMHKTTRVLFSKVNSSILKILKDEGYILDYQKEVVGNIPSFVVKLKYYERSPVISDIVRVSKPGCRCYSKYKDISKAYNGLGIFIISTSKGVMTDYDAHKLKFGGEILCRVF

Annotated regions:
phrase: GIFIISTSKGVMTDYDA
type: CONSERVED_SITE
name: Ribosomal_uS8_CS
description: Small ribosomal subunit protein uS8, conserved site
Protein sequence:
MDSLATSINQFALELSKKLAESAQGKNIFFSSWSISTSLTIVYLGAKGTTAAQMAQVLQFNRDQGVKCDPESEKKRKMEFNLSNSEEIHSDFQTLISEILKPNDDYLLKTANAIYGEKTYAFHNKYLEDMKTYFGAEPQPVNFVEASDQIRKDINSWVERQTEGKIQNLLPDDSVDSTTRMILVNALYFKGIWEHQFLVQNTTEKPFRINETTSKPVQMMFMKKKLHIFHIEKPKAVGLQLYYKSRDLSLLILLPEDINGLEQLEKAITYEKLNEWTSADMMELYEVQLHLPKFKLEDSYDLKSTLSSMGMSDAFSQSKADFSGMSSARNLFLSNVFHKAFVEINEQGTEAAAGSGSEIDIRIRVPSIEFNANHPFLFFIRHNKTNTILFYGRLCSP

Annotated regions:
phrase: FNANHPFLFF
type: CONSERVED_SITE
name: Serpin_CS
description: Serpin, conserved site

phrase: SINQFALELSKKLAESAQGKNIFFSSWSISTSLTIVYLGAKGTTAAQMAQVLQFNRDQGVKCDPESEKKRKMEFNLSNSEEIHSDFQTLISEILKPNDDYLLKTANAIYGEKTYAFHNKYLEDMKTYFGAEPQPVNFVEASDQIRKDINSWVERQTEGKIQNLLPDDSVDSTTRMILVNALYFKGIWEHQFLVQNTTEKPFRINETTSKPVQMMFMKKKLHIFHIEKPKAVGLQLYYKSRDLSLLILLPEDINGLEQLEKAITYEKLNEWTSADMMELYEVQLHLPKFKLEDSYDLKSTLSSMGMSDAFSQSKADFSGMSSARNLFLSNVFHKAFVEINEQGTEAAAGSGSEIDIRIRVPSIEFNANHPFLFFIRHNKTNTILFYGRLCS
type: DOMAIN
name: Serpin_dom
description: Serpin domain

phrase: LELSKKLAESAQGKNIFFSSWSISTSLTIVYLGAKGTTAAQMAQVLQFNRDQGVKCDPESEKKRKMEFNLSNSEEIHSDFQTLISEILKPNDDYLLKTANAIYGEKTYAFHNKYLEDMKTYFGAEPQPVNFVEASDQIRKDINSWVERQTEGKIQNLLPDDSVDSTTRMILVNALYFKGIWEHQFLVQNTTEKPFRINETTSKPVQMMFMKKKLHIFHIEKPKAVGLQLYYKSRDLSLLILLPEDINGLEQLEKAITYEKLNEWTSADMMELYEVQLHLPKFKLEDSYDLKSTLSSMGMSDAFSQSKADFSGMSSARNLFLSNVFHKAFVEINEQGTEAAAGSGSEIDIRIRVPSIEFNANHPFLFFIRHNKTNTILFYGRLCS
type: DOMAIN
name: Serpin_dom
description: Serpin domain
Protein sequence:
MKKIRPLTEADVTAESAFFMQRRQVLKALGISAAALSLPSTAQADLLSWFKGNDRPKAPVGKPLEFSQPAAWRSDLALTPEDKVTGYNNFYEFGLDKADPAANAGSLKTEPWTLKISGEVAKPYTLDYDDLTHRFPLEERIYRMRCVEAWSMVVPWIGFPLYKLLTQAQPTSHAKYVAFETLYAPDDMPGQKDRFVGGGLKYPYVEGLRLDEAMHPLTLMTVGVYGKALPPQNGAPIRLIVPWKYGFKGIKSIVSIKLTRERPPTTWNLSAPNEYGFYANVNPHVDHPRWSQATERFIGSGGILDVQRQPTLLFNGYASEVASLYRGLNLRENF

Annotated regions:
phrase: KTEPWTLKISGEVAKPYTLDYDDLTHRFPLEERIYRMRCVEAWSMVVPWIGFPLYKLLTQAQPTSHAKYVAFETLYAPDDMPGQKDRFVGGGLKYPYVEGLRLDEAMHPLTLMTVGVYGKALPPQNGAPIRLIVPWKYGFKGIKSIVSIKLTRERPPTT
type: DOMAIN
name: OxRdtase_Mopterin-bd_dom
description: Oxidoreductase, molybdopterin-binding domain

phrase: MKKIRPLTEADVTAESAFFMQRRQVLKALGISAAALSLPSTAQ
type: CONSERVED_SITE
name: TAT_signal
description: Twin-arginine translocation pathway, signal sequence
Protein sequence:
MRDRRSSYEYEDLLACGRGELFGPGNAQLPLPPMLMFDRITEISETGGAHGKGLIRAELDVNPDLWFFACHFKGDPVMPGCLGLDALWQMLGFFLGWSGGEGPGRALGSGELKFTGQVLPHVRKVVYNVDIKRVMRSKLWLGIADGWLSADDEIIYRAQDLKVGLFKQTAAKPAA

Annotated regions:
Protein sequence:
MVLMGPHSALRLLPLKTQAIRFVLLLLLSVLILAVALLVTNARMPDPKVVRPLPDIGFEVFPKVGWLEHLTDVCIFILNFLSLLVVFKLYLLHRQNEGLDELQPFSCCPLIGKIIFGVWDSGRQSGIEKRDAHLIAWIRYFTTYFIVLLFRAIVVVMTSYPATDNHCQNPMKITNPVKNVIMTLVTFGSGSIHCGDLMFSGHTVSITLSLLVQWIYGSMLHWVFRPASVLLVLLSFYSIIASRSHYTDDILVSFYITVTTFLVLRHSPDGAPWQLQLLIGWWPCCVSNEETEDSDRNPTFVAVEVFLPHGDYQCAERISEEKTTVGPACGNFGHW

Annotated regions:
phrase: HCGDLMFSGHTVSITLSLLVQWIYGSMLHWVFRPASVLLVLLSFYSIIASRSHYTDDILVSFYITVTTFLVLR
type: DOMAIN
name: Sphingomyelin_synth-like_dom
description: Sphingomyelin synthase-like domain
Protein sequence:
MENILDFTLEELKEWLISKEEKAFRAKQVFDWIYNKLIFDFNNMKNIPYKTKNLLSDNFYVGVPKVVKKLMSQDKNTYKFLFEYKDGNIIESVVMKYKHGNSICVSTQVGCRMGCKFCASTLDGVIRNLTSGEILSQIMAAQKEIGERISNVVLMGSGEPLDNFQNVTKFLDLVTSDTTLNIGQRHITLSTCGIVPKIKELADKNYNITLAISLHSPEDLLRKEMMPIANKYSIKELMEACDYYINKTNRRITFEYALVKGKNDSIKEAKKLSTVLKGKLCHVNLIPVNEIKENSYEKSTLKNIESFGNILKENGIETTIRREMGADINAACGQLRRSYVSK

Annotated regions:
phrase: STQVGCRMGCKFCASTLDGVIRNLTSGEILSQIMAAQKEIGERISNVVLMGSGEPLDNFQNVTKFLDLVTSDTTLNIGQRHITLSTCGIVPKIKELADKNYNITLAISLHSPEDLLRKEMMPIANKYSIKELMEACDYYINKTNRRITFEYALVKGKNDSIK
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: NILDFTLEELKEWLISKEEKAFRAKQVFDWIYNKLIFDFNNMKNIPYKTKNLLSDNF
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: YKHGNSICVSTQVGCRMGCKFCASTLDGVIRNLTSGEILSQIMAAQKEIGERISNVVLMGSGEPLDNFQNVTKFLDLVTSDTTLNIGQRHITLSTCGIVPKIKELADKNYNITLAISLHSPEDLLRKEMMPIANKYSIKELMEACDYYINKTNRRITFEYALVKGKNDSIKEAKKLSTVLKGKLCHVNLIPVNEIKENSYEKSTLKNIESFGNILKENGIETTIRREMGA
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MEKIKVKEIFNNVYSVDFGDGLKRIATKSLVPGKRVYGEKLVYSDSIEYRVWNPNKSKLGAAIINGLKKMPIKKGTKVLYLGASAGTTPSHVADIAENSLVYALEFAPRIMREFIDSCNERKNLIPVLGDANRPQDYSNIVEKVDVIFEDVAQPNQAEILVKNARWFLKENGYAMISIKARSVDVTKNPREIFAEQKKILIEGGFEIVDEINIEPFEKDHMMMVGIWNETKY

Annotated regions:
phrase: SLVYALEFAPRIMR
type: CONSERVED_SITE
name: Fibrillarin_CS
description: Fibrillarin, conserved site
Protein sequence:
MALLMRLLTLALALSVGPAGTLAGPAKSPYQLVLQHSRLRGRQHGPNVCAVQKVIGTNKKYFTNCKQWYQRKICGKSTVISYECCPGYEKVPGEKGCPAALPLSNLYETMGVVGSTTTQLYTDRTEKLRPEMEGPGSFTIFAPSNEAWSSLPAEVLDSLVSNVNIELLNALRYHMVDRRVLTDELKHGMTLTSMYQNSNIQIHHYPNGIVTVNCARLLKADHHATNGVVHLIDKVISTITNNIQQIIEIEDTFETLRAAVAASGLNTVLEGDGQFTLLAPTNEAFEKIPAETLNRILGDPEALRDLLNNHILKSAMCAEAIVAGMSMETLGGTTLEVGCSGDKLTINGKAVISNKDILATNGVIHFIDELLIPDSAKTLLELAGESDVSTAIDILKQAGLDTHLSGKEQLTFLAPLNSVFKDGVPRIDAQMKTLLLNHMVKEQLASKYLYSGQTLDTLGGKKLRVFVYRNSLCIENSCIAAHDKRGRFGTLFTMDRMLTPPMGTVMDVLKGDNRFSMLVAAIQSAGLMEILNREGVYTVFAPTNEAFQAMPPEELNKLLANAKELTNILKYHIGDEILVSGGIGALVRLKSLQGDKLEVSSKNNVVSVNKEPVAETDIMATNGVVYAINTVLQPPANRPQERGDELADSALEIFKQASAYSRAAQRSVRLAPVYQRLLERMKH

Annotated regions:
phrase: RFSMLVAAIQSAGLMEILNREGVYTVFAPTNEAFQAMPPEELNKLLANAKELTNILKYHIGDEILVSGGIGALVRLKSLQGDKLEVSSKNNVVSVNKEPVAETDIMATNGVVYAINTVLQ
type: DOMAIN
name: FAS1_domain
description: FAS1 domain

phrase: RTEKLRPEMEGPGSFTIFAPSNEAWSSLPAEVLDSLVSNVNIELLNALRYHMVDRRVLTDELKHGMTLTSMYQNSNIQIHHYPNGIVTVNCARLLKADHHATNGVVHLIDKV
type: DOMAIN
name: FAS1_domain
description: FAS1 domain

phrase: TFETLRAAVAASGLNTVLEGDGQFTLLAPTNEAFEKIPAETLNRILGDPEALRDLLNNHILKSAMCAEAIVAGMSMETLGGTTLEVGCSGDKLTINGKAVISNKDILATNGVIHFIDELLI
type: DOMAIN
name: FAS1_domain
description: FAS1 domain

phrase: DVSTAIDILKQAGLDTHLSGKEQLTFLAPLNSVFKDGVPRIDAQMKTLLLNHMVKEQLASKYLYSGQTLDTLGGKKLRVFVYRNSLCIENSCIAAHDKRGRFGTLFTMDRMLT
type: DOMAIN
name: FAS1_domain
description: FAS1 domain

phrase: SAKTLLELAGESDVSTAIDILKQAGLDTHLSGKEQLTFLAPLNSVFKDGVPRIDAQMKTLLLNHMVKEQLASKYLYSGQTLDTLGGKKLRVFVYRNSLCIENSCIAAHDKRGRFGTLFTMDRM
type: DOMAIN
name: FAS1_domain
description: FAS1 domain

phrase: LSNLYETMGVVGSTTTQLYTDRTEKLRPEMEGPGSFTIFAPSNEAWSSLPAEVLDSLVSNVNIELLNALRYHMVDRRVLTDELKHGMTLTSMYQNSNIQIHHYPNGIVTVNCARLLKADHHATNGVVHLIDKV
type: DOMAIN
name: FAS1_domain
description: FAS1 domain

phrase: GPNVCAVQKVIGTNKKYFTNCKQWYQRKICGKSTVISYECCPGYEKVPGEKGCP
type: DOMAIN
name: EMI_domain
description: EMI domain

phrase: TNNIQQIIEIEDTFETLRAAVAASGLNTVLEGDGQFTLLAPTNEAFEKIPAETLNRILGDPEALRDLLNNHILKSAMCAEAIVAGMSMETLGGTTLEVGCSGDKLTINGKAVISNKDILATNGVIHFIDEL
type: DOMAIN
name: FAS1_domain
description: FAS1 domain

phrase: TLLAPTNEAFEKIPAETLNRILGDPEALRDLLNNHILKSAMCAEAIVAGMSMETLGGTTLEVGCSGDKLTINGKAVISNKDILATNGVIHFIDELLIP
type: DOMAIN
name: FAS1_domain
description: FAS1 domain

phrase: TVFAPTNEAFQAMPPEELNKLLANAKELTNILKYHIGDEILVSGGIGALVRLKSLQGDKLEVSSKNNVVSVNKEPVAETDIMATNGVVYAINTVLQP
type: DOMAIN
name: FAS1_domain
description: FAS1 domain

phrase: TIFAPSNEAWSSLPAEVLDSLVSNVNIELLNALRYHMVDRRVLTDELKHGMTLTSMYQNSNIQIHHYPNGIVTVNCARLLKADHHATNGVVHLIDKVIST
type: DOMAIN
name: FAS1_domain
description: FAS1 domain

phrase: TFLAPLNSVFKDGVPRIDAQMKTLLLNHMVKEQLASKYLYSGQTLDTLGGKKLRVFVYRNSLCIENSCIAAHDKRGRFGTLFTMDRMLTP
type: DOMAIN
name: FAS1_domain
description: FAS1 domain

phrase: MGTVMDVLKGDNRFSMLVAAIQSAGLMEILNREGVYTVFAPTNEAFQAMPPEELNKLLANAKELTNILKYHIGDEILVSGGIGALVRLKSLQGDKLEVSSKNNVVSVNKEPVAETDIMATNGVVYAINTV
type: DOMAIN
name: FAS1_domain
description: FAS1 domain
Protein sequence:
MPGFHLNEMGEMVLDAIDDIGVVDVYDLASDIGKEYERIMDRFGTDAVSGLMPKIINTLELLEALATKNERENATIQELRDKVAQLESEKLEKAEFRRRFDKELELIEEQWRSETNELVDLVSSLQDENKRLVKQTQDLQSSSAQSSGLGASLTESIISMTNHELHSALSDTQVLQRLKEQIYKQRDELKHRERELQDKYSELEHLNIQAERLKASERDTRRRHKLMQAQVKTLCEERADFLAQLQDQSREINQLRKRLGLAEKENEDLVASYDDGQNDPNRPRYTTRELKELISERDELLTTIDTLNEQLAELKPPSQAKGKRQRHFSSSDDSDEDDDGHVADNDDDDDEEEAAAEANELEPPAAGETPPGHDAPVQGPLPYEPDDAPWKKSSESGIRKFFRKLFSDPSDGSNTFPKRSLATLSKMALSATPGSVSASAAAK

Annotated regions:
phrase: DVYDLASDIGKEYERIMDRFGTDAVSGLMPKIINTLELLEALATKNERENATIQELRDKVAQL
type: DOMAIN
name: RH1
description: RH1 domain

phrase: RPRYTTRELKELISERDELLTTIDTLNEQLAELKPPSQAKGKRQRHFSSSDDSDEDDDGHVADNDDDDDEEEAAAEANELEPPAAGETPPGHDAPVQGPLPYEPDDAPWKKSSESGIRK
type: DOMAIN
name: RH2
description: RH2 domain

phrase: EMGEMVLDAIDDIGVVDVYDLASDIGKEYERIMDRFGTDAVSGLMPKIINTLELLEALATKNERENATIQELRDKVAQLESEKLEKAE
type: DOMAIN
name: RH1
description: RH1 domain
Protein sequence:
METKPPIPLAVLVGIQTPDVDDIAHEASLAELGRLVKTLGYAVVGTVSQKREGTGAALLLGSGKLAELAALTGGTGVVTSMAPPPKSKARQRFEGAAEGAAPPEPDPDAARRPEFVIVDHELSPSQIRNLERATGAQVLDRTGVIVEIFHRHANTREARLQVEMARLKYVAPRLRESSGGGGRQQGPGAGESTLALDRRKIRDRLAELKTQLDAVQRDGDQRRSARRDQLRVALVGYTNAGKSSLMRALTGSQVLVEDKLFATLDTTVRILQPETRPRILVSDTVGFIKQLPHDLVASFRSTLAEALEASLLLFVVDASDPTYESQLEVTRGVLREIGADAVPSRLVLNKMDRLDPAARAALRDKHPDAIMLSAHAPGDVSALRDTLIAFFEAEMVEDTLVLPYAKQGLIGEIYESARVLSEDHDETGRVLKVRALPAAITRLKRSLAAR

Annotated regions:
phrase: VALVGYTNAGKSSLMRALTG
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: FRSTLAEALEASLLLFVV
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: LRVALVGYTNAGKSSLMRALTGSQVLVEDKLFATLDTTVRILQPETRPRILVSDTVGFIKQLPHDLVASFRSTLAEALEASLLLFVVDASDPTYESQLEVTRGVLREIGADAVPSRLVLNKMDRLDPAARAALRDKHPDAIMLSAHAPGDVSALRDTLIAFFEAE
type: DOMAIN
name: G_HFLX_dom
description: HflX-type guanine nucleotide-binding (G) domain

phrase: EASLAELGRLVKTLGYAVVGTVSQKREGTGAALLLGSGKLAELAAL
type: DOMAIN
name: GTPase_HflX_N
description: GTPase HflX, N-terminal

phrase: RPEFVIVDHELSPSQIRNLERATGAQVLDRTGVIVEI
type: DOMAIN
name: GTPase_HflX_N
description: GTPase HflX, N-terminal

phrase: RVALVGYTNAGKSSLMRALTGSQVLVEDKLFATLDTTVRILQPETRPRILVSDTVGFIKQLPHDLVASFRSTLAEALEASLLLFVVDASDPTYESQLEVTRGVLREIGADAVPSRLVLN
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: HANTREARLQVEMARLKYVAPRLRESSGGGGRQQGPGAGESTLALDRRKIRDRLAELKTQLDAVQRDGDQRRSA
type: DOMAIN
name: GTP-bd_M
description: GTP-binding protein, middle domain

phrase: ESTLALDRRKIRDRLAELKTQLDAVQRDGDQRRSARRDQLRVALVGYTNAGKSSLMRALTGSQVLVEDKLFATLDTTVRILQPETRPRILVSDTVGFIKQLPHDLVASFRSTLAEALEASLLLFVVDASDPTYESQLEVTRGVLREIGADAVPSRLVLNKMDRLDPAARAALRDKHPDAIMLSAHAPGDVSALRDTLIAF
type: DOMAIN
name: G_HFLX_dom
description: HflX-type guanine nucleotide-binding (G) domain
Protein sequence:
MPQKTKDTPMMRQYFAVKNQYPDAFLFYRLGDFYEMFFDDAIKGAQLLELTLTTRNHSAENPIPMCGVPHRAVQNYIDILVDKGYKVAICEQMEDPKLAKGMVKREVIQLVTPGTTLERGAEQAKTNNYLTALIQRDQQYGFAYADLSTGELKTSVLTTNDTLINELTSLQTKEIVVDDSVASDLRDQIKTLGILISEQNNVTPQAQLSYLTQDLTVDLEQQVVERLLMYITVTQKRSLAHLQKAIAYEPSYFLKLDHNSKYNLELMKSIRTGKKQGTLLWLLDETKTAMGGRLLKQWIDRPLIVKADIETRQNKVATLLDHYFERSNLQEELTKVYDLERLAGRVAFGSVNGRDLVQLKTSLRQIPKIRYILSELDTQVFNDEVNQLDPVEDVADLIDAAIVEDAPLSVTDGGVIKDGYNEQLDQYRDAMNNGKKWIAELEAQERATTGIKNLKIGFNRVFGYYIEVTKANLAQLPKDRYERKQTLTNAERFSTPELKSHESLILEAESHSTDLEYQLFTKVRETVKKAIQRLQTLAKAVAAIDVLQSFAVVSEDYHFVRPKLTKSHDLKIVDGRHPVVEKVMGNQSYVPNNVTMSPDETVLLITGPNMSGKSTYMRQLALTVIMAQIGCFVPAKSAQLPIFDQIFTRIGATDDLISGQSTFMVEMQEANNALQHATANSLVLFDEIGRGTATYDGMALAQAIIEFVHNHIHAKTLFSTHYHELTALDQELSGLRNVHVGATEQDGELVFLHKVEPGAADKSYGVHVAKLAGMPTSLLERANKILTSLENQTSTVSTTAASIAASDAANSVAPNTAASMPVEAADESQPVESETPVAEAPVAEAGDEQLSLFAEPAVTDAKGEKVLQQLKTLNLMAMTPMDVMNQLYKWQQKLGK

Annotated regions:
phrase: GYNEQLDQYRDAMNNGKKWIAELEAQERATTGIKNLKIGFNRVFGYYIEVTKANLAQLPKDRYERKQTLTNAERFSTPELKSHESLILEAE
type: DOMAIN
name: DNA_mismatch_repair_MutS_clamp
description: DNA mismatch repair protein MutS, clamp

phrase: YNLELMKSIRTGKKQGTLLWLLDETKTAMGGRLLKQWIDRPLIVKADIETRQNKVATLLDHYFERSNLQEELTKVYDLERLAGRVAFGSVNGRDLVQLKTSLRQIPKIRYILSELDTQVFNDEVNQLDPVEDVADLIDAAIVEDAPLSVTDGGVIKDGYNEQLDQYRDAMNNGKKWIAELEAQERATTGIKNLKIGFNRVFGYYIEVTKANLAQLPKDRYERKQTLTNAERFSTPELKSHESLILEAESHSTDLEYQLFTKVRETVKKAIQRLQTLAKAVAAIDVLQSF
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: TPMMRQYFAVKNQYPDAFLFYRLGDFYEMFFDDAIKGAQLLELTLTTRNHSAENPIPMCGVPHRAVQNYIDILVDKGYKVAICEQMEDPKLAKGMVKREVIQLVTPGTTL
type: DOMAIN
name: DNA_mismatch_repair_MutS-lik_N
description: DNA mismatch repair protein MutS-like, N-terminal

phrase: ETVLLITGPNMSGKSTYMRQLALTVIMAQIGCFVPAKSAQLPIFDQIFTRIGATDDLISGQSTFMVEMQEANNALQHATANSLVLFDEIGRGTATYDGMALAQAIIEFVHNHIHAKTLFSTHYHELTALDQELSGLRNVHVGATEQDGELVFLHKVEPGAADKSYGVHVAKLAGMPTSLLERANKIL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: NYLTALIQRDQQYGFAYADLSTGELKTSVLTTNDTLINELTSLQTKEIVVDDSVASDLRDQIKTLGILISEQNNVTPQAQLSYLTQDLTVDLEQQVVERLLMYITVTQKRSLAHL
type: DOMAIN
name: DNA_mmatch_repair_MutS_con_dom
description: DNA mismatch repair protein MutS, connector domain

phrase: KKQGTLLWLLDETKTAMGGRLLKQWIDRPLIVKADIETRQNKVATLLDHYFERSNLQEELTKVYDLERLAGRVAFGSVNGRDLVQLKTSLRQIPKIRYILSELDTQVFNDEVNQLDPVEDVADLIDAAIVEDAPLSVTDGGVIKDGYNEQLDQYRDAMNNGKKWIAELEAQERATTGIKNLKIGFNRVFGYYIEVTKANLAQLPKDRYERKQTLTNAERFSTPELKSHESLILEAESHSTDLEYQLFTKVRETVKKAIQRLQTLAKAVAAIDVLQSFAVVSEDYHFVRPKLTKSHDLKIVDGRHPVVEK
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: SLVLFDEIGRGTATYD
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: LITGPNMSGKSTYMRQLALTVIMAQIGCFVPAKSAQLPIFDQIFTRIGATDDLISGQSTFMVEMQEANNALQHATANSLVLFDEIGRGTATYDGMALAQAIIEFVHNHIHAKTLFSTHYHELTALDQELSGLRNVHVGATEQDGELVFLHKVEPGAADKSYGVHVAKLAGMPTSLLERANKILTSL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal
Protein sequence:
MQEILIPLKEKSYKVFLGELPEIKLKQKALIISDSIVAGLHLPYLLERLNALEVRVCVIESGEKYKNFHSLERILNNAFEMQLNRHSLMIALGGGVISDMVGFASSIYFRGIDFINIPTTLLAQVDASVGGKTGINTPYGKNLIGSFHQPKAVYMDLAFLKTLEKREFQAGVAEIIKMAVCFDKNLVERLETKDLKDCLEEVIFQSVNIKAQVVVQDEKERNIRAGLNYGHTFGMLIENETNYERFLHGEAIAIGMRMANDLALSLGMLTLKEYERIENLLKKFDLIFNYQITDIQKFYERLFLDKKSENQTLKFILPKGVGAFEIASHIPKETILKVLEKWH

Annotated regions:
phrase: GVAEIIKMAVCFDKNLVERLETKDLKDCLEEVIFQSVNIKAQVVVQDEKERNIRAGLNYGHTFGMLIENETNYERFLHGEAIAIGMRMANDLALSLGMLTLKEYERIENLLKKFDLIFNYQITDIQKFYERLFLDKK
type: DOMAIN
name: DHQS_C
description: 3-dehydroquinate synthase, C-terminal domain

phrase: CVIESGEKYKNFHSLERILNNAFEMQLNRHSLMIALGGGVISDMVGFASSIYFRGIDFINIPTTLLAQVDASVGGKTGINTPYGKNLIGSFHQPKAVYMDLAFLKTLEKREF
type: DOMAIN
name: DHQS/DOIS_N
description: 3-dehydroquinate synthase, N-terminal domain
Protein sequence:
MTTDNLNSADTTVQTLRNVLTSETEPLARRFRALFSLKHLACLQPPTEKTLPAIQAIAAGFSSASALLKHELAYCLGQTRNTDALPFLLDVVQDTQEDSMCRHEAAEALGALGYESSLEVLKALRDNENEVDVVRETCDIAVDRILWEQSEARKAEKLKPSDFTSIDPAPPMPLTAKEPSIPDLEKTLLDTNLPLFERYRAMFGLRDLASPPDLPTAKQAVQSLAKGMKDPSALFRHEIAFVFGQLCHPASVPSLTETLSDLNEVGMVRHEAAEALGSLGDVEGVEDTLKKFLNDPEKVVRDSIIVALDMAEFEKNGEIEYALIPDSGNPAAVPAA

Annotated regions:
phrase: SVPSLTETLSDLNEVGMVRHEAAEALGSLGDVEGVEDTLK
type: REPEAT
name: HEAT_type_2
description: HEAT, type 2

phrase: LFERYRAMFGLRDLASPPDLPTAKQAVQSLAKGMKD
type: REPEAT
name: PBS_lyase_HEAT
description: PBS lyase HEAT-like repeat

phrase: ALFRHEIAFVFGQLCHPASVPSLTETLSD
type: REPEAT
name: PBS_lyase_HEAT
description: PBS lyase HEAT-like repeat

phrase: SMCRHEAAEALGALGYESSLEVLKALRDN
type: REPEAT
name: PBS_lyase_HEAT
description: PBS lyase HEAT-like repeat

phrase: GMVRHEAAEALGSLGDVEGVEDTLKKFLND
type: REPEAT
name: PBS_lyase_HEAT
description: PBS lyase HEAT-like repeat

phrase: ALLKHELAYCLGQTRNTDALPFLLDVVQD
type: REPEAT
name: PBS_lyase_HEAT
description: PBS lyase HEAT-like repeat
Protein sequence:
MSNPANTELSYLKSLVNELNEKIAVLEGKAPANQGVRMVLVGPPGAGKGTQAPKILERFQNMVCHLATGDLLRQQVAMGTDLGKQAKKIMDQGALVSDEIMVGMIKDQLETNRSCKKGFILDGFPRTTPQAEKLDQMLSDRKQKLDHVIELQIPDELLISRITGRLIHPGSGRSYHKIFSPPKQPMKDDITGEPLVQRSDDNEEALRKRLATYHKQTTAVTDYYKKHGIWSPIDATQSPNTVWQSISAIFNNGASA

Annotated regions:
phrase: RLIHPGSGRSYHKIFSPPKQPMKDDITGEPLVQRS
type: DOMAIN
name: Adenylate_kinase_lid-dom
description: Adenylate kinase, active site lid domain

phrase: FILDGFPRTTP
type: CONSERVED_SITE
name: Adenylat_kinase_CS
description: Adenylate kinase, conserved site