nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MKMRTIAKTSLALGLLTTGAITVTTQSVKAEKIQSTKVDKVPTLKAERLAMINITAGANSATTQAANTRQERTPKLEKAPNTNEEKTSASKIEKISQPKQEEQKTLNISATPAPKQEQSQTTTESTTPKTKVTTPPSTNTPQPMQSTKSDTPQSPTIKQAQTDMTPKYEDLRAYYTKPSFEFEKQFGFMLKPWTTVRFMNVIPNRFIYKIALVGKDEKKYKDGPYDNIDVFIVLEDNKYQLKKYSVGGITKTNSKKVNHKVELSITKKDNQGMISRDVSEYMITKEEISLKELDFKLRKQLIEKHNLYGNMGSGTIVIKMKNGGKYTFELHKKLQEHRMADVIDGTNIDNIEVNIK

Annotated regions:
phrase: DLRAYYTKPSFEFEKQFGFMLKPWTTVRFMNVIPNRFIYKIALVGKDEKKYKDGPYDNIDVFIVLEDNKYQLKKYSVGGITKT
type: DOMAIN
name: SSL_OB
description: Staphylococcal superantigen-like OB-fold domain

phrase: VELSITKKDNQGMISRDVSEYMITKEEISLKELDFKLRKQLIEKHNLYGNMGSGTIVIKMKNGGKYTFELHKKLQEHRMADVIDGTNIDNIEVN
type: DOMAIN
name: Toxin_b-grasp_Staph/Strep
description: Staphylococcal/Streptococcal toxin, beta-grasp domain

phrase: KEEISLKELDFKLRKQLIEKHNL
type: CONSERVED_SITE
name: Staph/Strept_toxin_CS
description: Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site
Protein sequence:
MQDDNNAAGGTRPGVDLHSLSHGQLLSLLEELGQPKFRAKQIEEWIWEKNVSSFEQMSNLPKSLRAQLAERCSLGGVEEVARQVSADGSRKYLLRFPDRVSVECVGMPNRDRLAVCASSQAGCAMGCAFCATGAAGLTRSLTAGEIYEQVMHVRDDFGTRVTNVVLMGQGEPLMNYDATLAALRRLNSPEGAGIGARHLTVSTCGVIPMIKRFANEPEQFTLAVSLHSAVQRTRDMLMPGVRKYSLLHLYDIMGEYVDKTGRRPTYEYALIKGVNDSEEELASLCDFCRDNLTHVNLIKLNEVKGSKFRPTSDARAQEFVRRLNSVGVEATIRNSRGADIDAACGQLKQSIDRMA

Annotated regions:
phrase: VDLHSLSHGQLLSLLEELGQPKFRAKQIEEWIWEKNVSSFEQMSNLPKSLRAQLAERC
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: NRDRLAVCASSQAGCAMGCAFCATGAAGLTRSLTAGEIYEQVMHVRDDFGTRVTNVVLMGQGEPLMNYDATLAALRRLNSPEGAGIGARHLTVSTCGVIPMIKRFANEPEQFTLAVSLHSAVQRTRDMLMPGVRKYSLLHLYDIMGEYVDKTGRRPTYEYALIKGVNDSEEELASLCDFCRDNLTHVNLIKLNEVKGSKFRPTSDARAQEFVRRLNSVGVEATIRNSRGA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: QAGCAMGCAFCATGAAGLTRSLTAGEIYEQVMHVRDDFGTRVTNVVLMGQGEPLMNYDATLAALRRLNSPEGAGIGARHLTVSTCGVIPMIKRFANEPEQFTLAVSLHSAVQRTRDMLMPGVRKYSLLHLYDIMGEYVDKTGRRPTYEYALIKGVNDSEEELAS
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MLRLKNDRFIRALLRQPVDRTPVWIMRQAGRYLPEYRQLREKVPNFMAFCKTPELACEATLQPLRRFPLDAAIIFSDILTIPDAMGVDLHIAPTVGPVIRNPVRSAQDVNRLQMPAVEEALSYLFDAIRLTVKALDHRVPLIGFAGSPWTLACYMTEGQSSKTFLTARAMLYQQPDVFHTLLQKLTTLTIAYLNAQIKAGADVVMLFDTWGGLLTPSLYRQFSLDYLSQIAAEVVRQKNGRKIPLIFFTKNGGQWLESIANSGCDAVGLDWTTDIGQARRRVGDRVALQGNLDPAILLSNPESISTAAVDILKSYGQGSGHVFNLGHGIDPSTPIENVAALVEAVQNFSIKNEEPINSYYR

Annotated regions:
phrase: PVWIMRQAG
type: DOMAIN
name: Uroporphyrinogen_deCOase
description: Uroporphyrinogen decarboxylase (URO-D)

phrase: KNDRFIRALLRQPVDRTPVWIMRQAGRYLPEYRQLREKVPNFMAFCKTPELACEATLQPLRRFPLDAAIIFSDILTIPDAMGVDLHIAPTVGPVIRNPVRSAQDVNRLQMPAVEEALSYLFDAIRLTVKALDHRVPLIGFAGSPWTLACYMTEGQSSKTFLTARAMLYQQPDVFHTLLQKLTTLTIAYLNAQIKAGADVVMLFDTWGGLLTPSLYRQFSLDYLSQIAAEVVRQKNGRKIPLIFFTKNGGQWLESIANSGCDAVGLDWTTDIGQARRRVGDRVALQGNLDPAILLSNPESISTAAVDILKSYGQGSGHVFNLGHGIDPSTPIENVAALVEAVQ
type: DOMAIN
name: Uroporphyrinogen_deCOase
description: Uroporphyrinogen decarboxylase (URO-D)

phrase: IGFAGSPWTLACYMTE
type: DOMAIN
name: Uroporphyrinogen_deCOase
description: Uroporphyrinogen decarboxylase (URO-D)
Protein sequence:
MAALTTLFKYIDENQDRYIKKLAKWVAIQSVSAWPEKRGEIRRMMEVAAADVKQLGGSVELVDIGKQKLPDGSEIPLPPILLGRLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVERDGKLHGRGSTDDKGPVAGWINALEAYQKTDQEIPVNVRFCLEGMEESGSEGLDELIFAQKDTFFKDVDYVCISDNYWLGKKKPCITYGLRGICYFFIEVECSNKDLHSGVYGGSVHEAMTDLILLMGSLVDKRGNILIPGINEAVAAVTEEEHKLYDDIDFDIEEFAKDVGAQILLHSNKKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPNMTPEVVSEQVTSYLTKKFAELRSPNEFKVYMGHGGKPWVSDFSHPHYVAGRRAMRTVFGVEPDLTREGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQNEKLNRHNYIEGTKMLAAYLYEVSQLKD

Annotated regions:
phrase: STDDKGPVAGWINALEAYQKTDQEIPVNVRFCLEGMEES
type: CONSERVED_SITE
name: ArgE/DapE_CS
description: ArgE/DapE/ACY1/CPG2/YscS, conserved site

phrase: YGLRGICYFFIEVECSNKDLHSGVYGGSVHEAMTDLILLMGSLVDKRGNILIPGINEAVAAVTEEEHKLYDDIDFDIEEFAKDVGAQILLHSNKKDILMHRWRYPSLSLHGIEGAFSGSGAKTVIPRKVVGKFSIRLVPNMTPEVVSEQVTSYLTKKF
type: DOMAIN
name: Peptidase_M20_dimer
description: Peptidase M20, dimerisation domain
Protein sequence:
MSIARRTTLSKFLIEQQRETNNLPADLRLLIEVVARACKAISYNVSKGALGEALGTAGSENVQGEVQKKLDILSNEILLDANEWGGNLAAMASEEMETFFPIPANYPRGEYLLVFDPLDGSSNIDVNVSIGTIFSVLRCPDGKQATEESFLQPGTQQVAAGYAVYGPQTVFVLTTGNGVNCFTLDREVGSWVLTQSNMQIPADTREYAINASNARHWYDPVKRYVDELNAGKDGPRGDNFNMRWIASMVSDVHRILNRGGVFMYPADKRTPDRPGKLRLMYEANPMSFIVEQAGGAATTGTQRIMEVQPTGLHQRVPVFLGSKNEVDRVTGYHQEKQ

Annotated regions:
phrase: TLSKFLIEQQRETNNLPADLRLLIEVVARACKAISYNVSKGALGEALGTAGSENVQGEVQKKLDILSNEILLDANEWGGNLAAMASEEMETFFPIPANYPRGEYLLVFDPLDGSSNIDVNVSIGTIFSVLRCPDGKQATEESFLQPGTQQVAAGYAVYGPQTVFVLTTGNGVNCFTLDREVGSWVLT
type: DOMAIN
name: FBPase_N
description: Fructose-1-6-bisphosphatase class I, N-terminal

phrase: IPADTREYAINASNARHWYDPVKRYVDELNAGKDGPRGDNFNMRWIASMVSDVHRILNRGGVFMYPADKRTPDRPGKLRLMYEANPMSFIVEQAGGAATTGTQRIMEVQPTGLHQRVPVFLGSKNEVDRVTGY
type: DOMAIN
name: FBPase_C_dom
description: Fructose-1-6-bisphosphatase class 1, C-terminal
Protein sequence:
MSQVRSPFVVVMGHVDVGKTLLLDKIRGTSVAYREPGMITQHIGMSFVPWSAVEKFAGPLVDRLRLRGRIWIPGFLFIDTPGHAAFSNLRKRGGSVADLAILVVDITSGLEEQGVESLKLIQSRGVPFVIAANKLDRIYGWKSVENRPFLFAVEDQEWHAVATLEERIGKLIEELSRHGIDADRYDRVRDFSKQVPIVPTSAVTGEGIADLLLVLAGVSQRFIPRERLQVREGPAKGVVMEVKEERGLGVVADVILYDGTLRKGDVLVTASLEGPKEARVRMLIMPKPLEEMRDPEDKFMAVEEVKAAAGVRVVADGLEGVVAGSPLIAVWDPREIPNACNLVKEEISEIRIESDKEGVIVRADTFGTLESIVLFLRQQGVPVRKADVGPPTHKDVVEAVLSRRKNPIYGVILAFNVKTPPEVEKEAMSSGIKIIAGEILYRIFDEYIKWSQEVRTKTIEQILSQLTRPGKIQILPGFVFRRSDPAIVGVKVLAGTIKPGVTLVKDGREVGRIMQIQKTGRAINEAAAGDEVAISIHGDVIVGRQIKEGDILYVYVPDDQARQWLFQYRQYLREDELKALEEYLKSRRK

Annotated regions:
phrase: RPGKIQILPGFVFRRSDPAIVGVKVLAGTIKPGVTLVKDGREVGRIMQIQKTGRAINEAAAGDEVAISIHGDVIVGRQIKEGDIL
type: DOMAIN
name: EFTU-type
description: Elongation factor Tu-type domain

phrase: FVVVMGHVDVGKT
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: LFIDTPGHAA
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: RGGSVADLAIL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: FVIAANKLD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: FVVVMGHVDVGKTLLLDKIRGTSVAYREPGMITQHIGMSFVPWSAVEKFAGPLVDRLRLRGRIWIPGFLFIDTPGHAAFSNLRKRGGSVADLAILVVDITSGLEEQGVESLKLIQSRGVPFVIAANKLDRIYGWKSVENRPFLFAVEDQEWHAVATLEERIGKLIEELSRHGIDADRYDRVRDFSKQVPIVPTSAVTGEGIADLLLVL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: EISEIRIESDKEGVIVRADTFGTLESIVLFLRQQGVPVRKADVGPPTHKDVVEAVLSRRKNPIYGVILAFNVKTPPEVEKEAMSSGIKIIAGEILYRIFDE
type: DOMAIN
name: TIF_IF2_dom3
description: Translation initiation factor IF- 2, domain 3

phrase: PFVVVMGHVDVGKTLLLDKIRGTSVAYREPGMITQHIGMSFVPWSAVEKFAGPLVDRLRLRGRIWIPGFLFIDTPGHAAFSNLRKRGGSVADLAILVVDITSGLEEQGVESLKLIQSRGVPFVIAANKLDR
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: VRSPFVVVMGHVDVGKTLLLDKIRGTSVAYREPGMITQHIGMSFVPWSAVEKFAGPLVDRLRLRGRIWIPGFLFIDTPGHAAFSNLRKRGGSVADLAILVVDITSGLEEQGVESLKLIQSRGVPFVIAANKLDRIYGWKSVENRPFLFAVEDQEWHAVATLEERIGKLIEELSRHGIDADRYDRVRDFSKQVPIVPTSAVTGEGIADLLLVLAGVSQRFIP
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain
Protein sequence:
MGKLLRHFLTLRDFSKDEILEIINIGLEIKKSLKSAVCKHELKNQTLAMIFEKSSTRTRVSFETGMFQLGGHALFLSNRDIHLGRGEPVKDTARVISGMCDMIMIRTFEHSRIEEFASYSKVPVINGLTDSYHPVQLLADYMTLVEYGMEKNIIAAYVGDGNNMTHSWMMLAAKLGFELRVATPKGYEVDEKILQEALLIAKESGAVIKVTNDPSEAVKGATVVTTDTWTSMGQEEEKEARIRIFNGFMVDEKMMSQAASNAKFLHCLPAYRGLEVSEEVFEKHSEIIFNEAENRLHAQKGLMVWLDKQRNI

Annotated regions:
phrase: NIIAAYVGDGNNMTHSWMMLAAKLGFELRVATPKGYEVDEKILQEALLIAKESGAVIKVTNDPSEAVKGATVVTTDTWTSMGQEEEKEARIRIFNGFMVDEKMMSQAASNAKFLHCLPAYRGLEVSEEVFEKHSEIIFNEAENRLHAQKGLMVW
type: DOMAIN
name: Asp_carbamoyltransf_Asp/Orn-bd
description: Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain

phrase: RHFLTLRDFSKDEILEIINIGLEIKKSLKSAVCKHELKNQTLAMIFEKSSTRTRVSFETGMFQLGGHALFLSNRDIHLGRGEPVKDTARVISGMCDMIMIRTFEHSRIEEFASYSKVPVINGLTDSYHPVQLLADYMTLV
type: DOMAIN
name: Asp/Orn_carbamoyltranf_P-bd
description: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding
Protein sequence:
MNKLMSWVSVLIILPEAFAQTDLRGKVFVFPRESSTDHVTLITKLEKPLKNLTLCLRAYSDLSRGYSLFSYNIHSKDNELLVFKNGIGEYSLYIGKTKVTVRATEKFPSPVHICTSWESSTGIAEFWINGKPLVKRGLKQGYAVGAHPKIVLGQEQDSYGGGFDKNQSFMGEIGDLYMWDSVLSPEEILLVYQGSSSISPTILDWQALKYEIKGYVIVKPMVWG

Annotated regions:
phrase: HICTSWE
type: CONSERVED_SITE
name: Pentaxin_CS
description: Pentaxin, conserved site
Protein sequence:
MSISFDLTIDDTRDQLARHARASLEAKPSLIGMSREEMAEALIKAGVPERQVKMRISQLWHWLYVRGVSDFADMRNISKDLRAMLAQHFTIARPEVVEEQISQDGTRKWLFRFPPRGAGRPVEIESVYIPEEGRGTLCVSSQVGCTLTCSFCHTGTQKLVRNLTSEEILAQLLTARDRLGDFPDKDTPDGAMVPAEGRKITNIVMMGMGEPLYNFEEVKKALLIASDGDGLSLSKRRITLSTSGVVPEIYRTGDEIGVMLAISLHAVRDELRDILVPINKKYPLEQLIKACREYPGLSNAKRITFEYVMLKDINDSLEDAKLLVKLLQGIPAKINLIPFNPWPGTNYQCSEWEQIEKFADYVNAAGYASPIRTPRGRDILAACGQLKSESERMRKSERLALEAMMIAGHGE

Annotated regions:
phrase: EAKPSLIGMSREEMAEALIKAGVPERQVKMRISQLWHWLYVRGVSDFADMRNISKDLRAMLAQHFTIARPEVVEEQISQDGTRKWLFRFPPRGAGRPVEIESVYIPEEGRGTLCVSSQVGCTLTCSFCHTGTQKLVRNLTSEEILAQLLTARDRLGDFPDKDTPDGAMVPAEGRKITNIVMMGMGEPLYNFEEVKKALLIASDGDGLSLSKRRITLSTSGVVPEIYRTGDEIGVMLAISLHAVRDELRDILVPINKKYPLEQLIKACREYPGLSNAKRITFEYVMLKDINDSLEDAKLLVKLLQGIPAKINLIPFNPWPGTNYQCSEWEQIEKFADYVNAAGYASPIRTPRGRDILAACGQLKSESERMRKS
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: EEGRGTLCVSSQVGCTLTCSFCHTGTQKLVRNLTSEEILAQLLTARDRLGDFPDKDTPDGAMVPAEGRKITNIVMMGMGEPLYNFEEVKKALLIASDGDGLSLSKRRITLSTSGVVPEIYRTGDEIGVMLAISLHAVRDELRDILVPINKKYPLEQLIKACREYPGLSNAKRITFEYVMLKDINDSLEDAKLLVKLLQGIPAKINLIPFNPWPGTNYQCSEWEQIEKFADYVNAAGYASPIRTPRGRDI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LIGMSREEMAEALIKAGVPERQVKMRISQLWHWLYVRGVSDFADMRNISKDLRAMLAQHFT
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: TNIVMMGMGEPLYNFEEVKKALLIASDGDGLSLSKRRITLSTSGVVPEIYRTGDEIGVMLAISLHAVRDELRDILVPINKKYPLEQLIKACREYPGLSNAKRITFEYVMLKDINDSLE
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MNNIRMFLSKTSVKMARAFGDARPINAKVFTFVKQFDGFPKETDLKLVEEELPPLKNGEFLSEAVYLSVDPYMRGYAPTLKLGSTFIGSQVAKVIESKNPKFPVGKHVVGEFGWRTHTISTGEKLTSGLAGAWLIPNFGELPLSLALGTLGMPGNTAYFGLLELCQPKPGETVVVTGAGGAVGNVVGQIAKIKGCKVIGVTGSDEKGKWLVEDLGFDNFINYKTDDVKQKLKEYAPNGIDCYFDNVGGEISNTIMYCMNLFGRVAVSGAISAYNDKSIPTATIAQYPLLSHQLRMEGFIVHRWADRWFEGIKQNRTWIQEGKLKYPETVTEGFENMFKAFTDMLNGVNFGKAIVKV

Annotated regions:
phrase: AVGNVVGQIAKIKGCKVIGVTGSDEKGKWLVEDLGFDNFINYKTDDVKQKLKEYAPNGIDCYFDNVGGEISNTIMYCMNLFGRVAVSGAISAYNDKSIPTATIAQYPLLSHQLRMEGFIVHRWADR
type: DOMAIN
name: ADH-like_C
description: Alcohol dehydrogenase-like, C-terminal

phrase: VFTFVKQFDGFPKETDLKLVEEELPPLKNGEFLSEAVYLSVDPYMRGYAPTLKLGSTFIGSQVAKVIESKNPKFPVGKHVVGEFGWRTHTISTGEKL
type: DOMAIN
name: ADH_N_2
description: Oxidoreductase, N-terminal domain

phrase: ETDLKLVEEELPPLKNGEFLSEAVYLSVDPYMRGYAPTLKLGSTFIGSQVAKVIESKNPKFPVGKHVVGEFGWRTHTISTGEKLTSGLAGAWLIPNFGELPLSLALGTLGMPGNTAYFGLLELCQPKPGETVVVTGAGGAVGNVVGQIAKIKGCKVIGVTGSDEKGKWLVEDLGFDNFINYKTDDVKQKLKEYAPNGIDCYFDNVGGEISNTIMYCMNLFGRVAVSGAISAYNDKSIPTATIAQYPLLSHQLRMEGFIVHRWADRWFEGIKQNRTWIQEGKLKYPETVTEGFENMFKAFTDMLNGVNFGKAI
type: DOMAIN
name: PKS_ER
description: Polyketide synthase, enoylreductase domain
Protein sequence:
MTPVNFLDLPPLLSARGTVTLPGSKSISNRVLLLAALSEGSTEVRDVLLSDDTERMLDGLRTLGVGVEKLDNHVFRVQGCAGNFTVNDAELFLGNAGTAFRPLTAALALSGGHYKLSGVSRMHERPIGDLVDALRALGANIDYLGNDGFPPLEIFPATLSGVARVSVRGDVSSQFLTALLMALPLLDREVAVEVVGELISKPYIEITLAMMARFGVTVRRDGWRSFTVAAGSRYATPGVIYVEGDASSASYFLAAGAIGGGPVRIEGVGSDSIQGDVRFADALALMGAQVERGPNWMEARAPANGKLKAIDLDCNHIPDAAMTLAVAALFADGTTTLRNIASWRVKETDRIAAMVTELRKVGATVEEGADYIRVTPPRVGSRIEERGSSENQTPPSLPLSGEESQRSPHEKGELEGVSLDPRSSLLNPATGIDTYDDHRMAMCFSLAAFGAEGIRINDPHCVTKTFPDYFARFREVAQAVPVIAIDGPSASGKGTVAQRVAAKLGYHYLDSGALYRLLAMAAQRDGIALTDETGLAALAGRMEIRFEGEQIWLDGALAGDELRGEQCAAAASKVAAFPRVRDALLSKQHAFRRAPGLVADGRDMSSVVFPDAAIKIFLTASAEARAERRYKQLKEKGMDANITALLLDIHERDERDTRRSVAPLQQAVGANLLDTTALNIEQAVQEVLARYLAKGF

Annotated regions:
phrase: VIAIDGPSASGKGTVAQRVAAKLGYHYLDSGALYRLLAMAAQRDGIALTDETGLAALAGRMEIRFEGEQIWLDGALAGDELRGEQCAAAASKVAAFPRVRDALLSKQHAFRRAPGLVADGRDMSSVVFPDAAIKIFLTASAEARAERRYKQLKEKGMDANITALLLDIHERDERDTRRSVAPLQQAVGANLLDT
type: DOMAIN
name: Cytidylate_kinase_dom
description: Cytidylate kinase domain

phrase: IAIDGPSASGKGTVAQRVAAKLGYHYLDSGALYRLLAMAAQRDGIALTDETGLAALAGRMEIRFEGEQIWLDGALAGDELRGEQCAAAASKVAAFPRVRDALLSKQHAFRRAPGLVADGRDMSSVVFPDAAIKIFLTASAEARAERRYKQLKEKGMDANITALLLDIHERDERDTRRSVAPLQQAVGANLLDTTALNIEQAVQEVL
type: DOMAIN
name: Cytidylate_kinase_dom
description: Cytidylate kinase domain

phrase: RVKETDRIAAMVTELRKV
type: CONSERVED_SITE
name: EPSP_synthase_CS
description: 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site

phrase: LFLGNAGTAFRPLT
type: CONSERVED_SITE
name: EPSP_synthase_CS
description: 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site

phrase: TGIDTYDDHRMAMCFSLAAFGAEGIRINDPHCVTKTFPDYF
type: DOMAIN
name: Enolpyruvate_Tfrase_dom
description: Enolpyruvate transferase domain

phrase: RGTVTLPGSKSISNRVLLLAALSEGSTEVRDVLLSDDTERMLDGLRTLGVGVEKLDNHVFRVQGCAGNFTVNDAELFLGNAGTAFRPLTAALALSGGHYKLSGVSRMHERPIGDLVDALRALGANIDYLGNDGFPPLEIFPATLSGVARVSVRGDVSSQFLTALLMALPLLDREVAVEVVGELISKPYIEITLAMMARFGVTVRRDGWRSFTVAAGSRYATPGVIYVEGDASSASYFLAAGAIGGGPVRIEGVGSDSIQGDVRFADALALMGAQVERGPNWMEARAPANGKLKAIDLDCNHIPDAAMTLAVAALFADGTTTLRNIASWRVKETDRIAAMVTELRKVGATVEEGADYIRVTPPR
type: DOMAIN
name: Enolpyruvate_Tfrase_dom
description: Enolpyruvate transferase domain
Protein sequence:
MGFEVVSAIDLDLPEPEETESTFAGNAILKAKSAADATGAPALSDDSGLAVTALGGAPGIYSARWAGEPRDFGAAMAKVQRELEDIGATDRTAKFVCALAVVWPDGHAEVFEGEVHGELVWPPRGDKGFGYDPVFVADGEQITFGEMDPERKHAMSHRANAVKKLKAALLS

Annotated regions:
Protein sequence:
MRVGIIGCSGRMGTLLSSLLRSSNRFTLGPGFSRQSPYSLDSVIESNDVLVDFSSSSFSEELLIALLSNPKPLIFATTKPEPSYSVDEKLQRLAAYVPVVVCPNTSLGAYVQKRLVGLLARVFDDRYDIRISEVHHREKKDPVSGTAKELASILCHTKQEAWQQEYSIGSRCHSVKNIELHVSRVGNISGEHEVAFISDKEHISIHHKVFSRAVFAEGALRILDWLIDESPPPGCYGPEVGLKVSM

Annotated regions:
phrase: MRVGIIGCSGRMGTLLSSLLRSSNRFTLGPGFSRQSPYSLDSVIESNDVLVDFSSSSFSEELLIALLSNPKPLIFATTKPEPSYSVDEKLQRLAAYVPVVVCP
type: DOMAIN
name: DapB_N
description: Dihydrodipicolinate reductase, N-terminal

phrase: RISEVHHREKKDPVSGT
type: CONSERVED_SITE
name: DapB_N_CS
description: Dihydrodipicolinate reductase, conserved site

phrase: GAYVQKRLVGLLARVFDDRYDIRISEVHHREKKDPVSGTAKELASILCHTKQEAWQQEYSIGSRCHSVKNIELHVSRVGNISGEHEVAFISDKEHISIHHKVFSRAVFAEGALRILDWLIDESPPPGC
type: DOMAIN
name: DapB_C
description: Dihydrodipicolinate reductase, C-terminal
Protein sequence:
MRAKETRKNYWWRWGILLLGMLMISSAAEQLWVTVYYGVPVWKEATTTLFCASDAKAYSTEAHNVWATHACVPTDPNPQEVVLGNMTENFNMWKNDMVDQMHEDVISLWDQSLKPCVKLTPLCVTLNCTDDLRNDLRNATTNATIINTTSSDRGEIKNCSFNVTTETSDRRRKDYALFYKLDVVPIENDNNSYMLISCNTSRVTQACPKITFEPIPIHYCAPAGFAILKCNNKKFSGTGPCTNVSTVQCTHGIRPVISTQLLLNGSLAEEDIVIRSKNFTNNANIIIVHLNKSVTIECIRPNNNTRKSVRIGPGSAFYATGGIIGDIRQAHCNITRANWTSTLRRVVEKLREQFGNKTINFTHSSGGDPEVVMHSFNCGGEFFYCNTTQLFNSSWRVNETWNNTEEGNIILPCRIKQFINMWQGVGKAMYASPIAGRIKCRSDITGLLLLRDGGQENNTETNNTETFRPGGGDMKDNWRSELYKYKVVKIEPLGIAPTKAKRRVVQREKRGAGIGALFLGFLGAAGSTMGAASMTLTVQARQLLSGIVQQQNNLLKAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKTLSAIWDNMTWMEWEKEIDNYTGLIYNLLEESQNQQEKNEQELLELDKWASLWNWFKITNWLWYIKIFIMVVGGLVGLRIVFSVLSIVNRVRQGYSPLSFQTHLPARRGPDRPEGIEEEGGERDRDRSGGLVNGFLTIIWVDLRSLCLFSYH

Annotated regions:
phrase: MGAASMTLTVQARQLLSGIVQQQNNLLKAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKTLSAIWDNMTWMEWEKEIDNYTGLIYNLLEESQNQQEKNEQELLELDKWASLWNWFKITNWLWYIKIFIMVVGGLVGLRIVFSVLSIVNRVRQGYSPLSFQ
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: VQARQLLSGIVQQQNNLLKAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNASWSNKTLSAIWDNMTWMEWEKEIDNYTGLIYNLLEESQNQQEKNEQELLELD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKEATTTLFCASDAKAYSTEAHNVWATHACVPTDPNPQEVVLGNMTENFNMWKNDMVDQMHEDVISLWDQSLKPCVKLTPLCVTLNCTDDLRNDLRNATTNATIINTTSSDRGEIKNCSFNVTTETSDRRRKDYALFYKLDVVPIENDNNSYMLISCNTSRVTQACPKITFEPIPIHYCAPAGFAILKCNNKKFSGTGPCTNVSTVQCTHGIRPVISTQLLLNGSLAEEDIVIRSKNFTNNANIIIVHLNKSVTIECIRPNNNTRKSVRIGPGSAFYATGGIIGDIRQAHCNITRANWTSTLRRVVEKLREQFGNKTINFTHSSGGDPEVVMHSFNCGGEFFYCNTTQLFNSSWRVNETWNNTEEGNIILPCRIKQFINMWQGVGKAMYASPIAGRIKCRSDITGLLLLRDGGQENNTETNNTETFRPGGGDMKDNWRSELYKYKVVKIEPLGIAPTKAKRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MFVLSTAMACLVYIYIYIYDEEKKRELKVRNKMTNLLFFQFLLLTTASSLTHISAQTVPPPPPPPTSAATPPSRAAQEFLDAHNKARSEVGVGPLTWSPMLAKETSLLVRYQRDKQNCSFANLSNGKYGGNQLWASGTVVTPRMAVDSWVAEKKFYNYENNSCTGDDKCGVYTQIVWKKSIELGCAQRTCYEGPATLTVCFYNPPGNVIGEKPY

Annotated regions:
phrase: RAAQEFLDAHNKARSEVGVGPLTWSPMLAKETSLLVRYQRDKQNCSFANLSNGKYGGNQLWASGTVVTPRMAVDSWVAEKKFYNYENNSCTGDDKCGVYTQIVWKKSIELGCAQRTCYEGPATLTVCFYNPPGNVI
type: DOMAIN
name: CAP_dom
description: CAP domain

phrase: LDAHNKARSEVGVGPLTWSPMLAKETSLLVRYQRDKQNCSFANLSNGKYGGNQLWASGTVVTPRMAVDSWVAEKKFYNYENNSCTGDDKCGVYTQIVWKKSIELGCAQRTCYEGPATLTV
type: DOMAIN
name: CAP_dom
description: CAP domain
Protein sequence:
MNPAPGSSIIMIHPSRFSVPLFEILQGKYSYVKGQTLHSSLRNPGVFSRQLFVHLYKRALSRCTYDEVLSDWQLFEAGIRARWRGSRYESGAFKASTFQSWVDTVKMTLDQLLLNNIYHILHTRTNLSYERYVDWVVAVGLVPLFVSKPDRALVKSITSKFSADSVGFSSDKYKTMKTVLMTFKRELTSVLETVTSIYIPDFSEVQLYFDGSTTAYFGVYRGQRITVEVVNRPIIFNGEVTFDSPVQRLFNTVMSCHRTAEHAKLCQLLNTSPMKAVVGSTSNNLYKDILNHLEQSSHKSDPKREMLQLLIKLAENKTVSGITDVVEDFVTDVSQNIVDRNKLFGGGGGGPSAESTAQGLKKQVSGTVFKCLTNQINEQFDTIHKLEKERDMMLRKVHTLETHLSQCRAEDKRLGEVSITSSLLTTDTLKSLLNIHDSSLSLHAASVNKGDNVHNSFFSQYVPPFREVSQDLTSLWESEVFETFKLTPVIDNQGQRLYVKYSQDTVSVLLGPFTYVITKMYEMELITDVYSSLSLNEIADGLYKSSRLYVYMQDVGAKYNLESQEYFDAASAASAAAPAAGRTQSPSAFSQQAQHGPP

Annotated regions:
Protein sequence:
MIELHQVSKSFNVNGKTVEAVKNVSITVEKGEIFGVVGYSGAGKSTLVRCINLLERPDAGQVVIDGKNLSTLSSKELRVARRKIGMIFQGYNLLKTATVYDNIAKPLKLEGVPKDEIETRVNKYLSIVGLEDKRNNYPSQLSGGQKQRVAIARALAHEPEILLSDEATSALDPETTEAILQLLLKINAELGITIFLITHELDVIQRICDRVAVMENGHLVEQGTVLDIFTKAKHATTKRFVGSEASFDIPQDLLEKYVATGKLVSLHFIGDEADEPALALVSRKFDVLPSILAGGIDHLKNGTLGKLLVHLKGDEVEYSKAISYLKESGVVVEEVELL

Annotated regions:
phrase: KGEIFGVVGYSGAGKSTLVRCINLLERPDAGQVVIDGKNLSTLSSKELRVARRKIGMIFQGYNLLKTATVYDNIAKPLKLEGVPKDEIETRVNKYLSIVGLEDKRNNYPSQLSGGQKQRVAIARALAHEPEILLSDEATSALDPETTEAILQLLLKINAELGITIFLITHELDVIQRICDRVAVMENG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: MIELHQVSKSFNVNGKTVEAVKNVSITVEKGEIFGVVGYSGAGKSTLVRCINLLERPDAGQVVIDGKNLSTLSSKELRVARRKIGMIFQGYNLLKTATVYDNIAKPLKLEGVPKDEIETRVNKYLSIVGLEDKRNNYPSQLSGGQKQRVAIARALAHEPEILLSDEATSALDPETTEAILQLLLKINAELGITIFLITHELDVIQRICDRVAVMENGHLVEQGTVLDI
type: DOMAIN
name: MetN_ABC
description: Methionine import ATP-binding protein MetN, ATP-binding domain

phrase: TGKLVSLHFIGDEADEPALALVSRKFDVLPSILAGGIDHLKNGTLGKLLVHLKGDEVEYSKAISYLKESGVVVEE
type: DOMAIN
name: NIL_domain
description: NIL domain

phrase: LSGGQKQRVAIARA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: KLVSLHFIGDEADEPALALVSRKFDVLPSILAGGIDHLKNGTLGKLLVHLKGDEVEYSKAISYLKESGVVVE
type: DOMAIN
name: NIL_domain
description: NIL domain

phrase: IELHQVSKSFNVNGKTVEAVKNVSITVEKGEIFGVVGYSGAGKSTLVRCINLLERPDAGQVVIDGKNLSTLSSKELRVARRKIGMIFQGYNLLKTATVYDNIAKPLKLEGVPKDEIETRVNKYLSIVGLEDKRNNYPSQLSGGQKQRVAIARALAHEPEILLSDEATSALDPETTEAILQLLLKINAELGITIFLITHELDVIQRICDRVAVMENGHLVEQGTVLDIFTKAKHATTKRF
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: VKNVSITVEKGEIFGVVGYSGAGKSTLVRCINLLERPDAGQVVIDGKNLSTLSSKELRVARRKIGMIFQGYNLLKTATVYDNIAKPLKLEGVPKDEIETRVNKYLSIVGLEDKRNNYPSQLSGGQKQRVAIARALAHEPEILLSDEAT
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain
Protein sequence:
MPHILPEPSVTGPRHISDTNLLAWYQRSHRDLPWREPGVSPWQILVSEFMLQQTPAARVLAIWPDWVRRWPTPSATATASTADVLRAWGKLGYPRRAKRLHECATVIARDHNDVVPDDIEILVTLPGVGSYTARAVACFAYRQRVPVVDTNVRRVVARAVHGRADAGAPSVPRDHADVLALLPHRETAPEFSVALMELGATVCTARTPRCGLCPLDWCAWRHAGYPPSDGPPRRGQAYTGTDRQVRGRLLDVLRAAEFPVTRAELDVAWLTDTAQRDRALESLLADALVTRTVDGRFALPGEGF

Annotated regions:
phrase: VCTARTPRCGLCPLDWCAW
type: CONSERVED_SITE
name: Endonuclease3_FeS-loop_motif
description: Endonuclease III-like, iron-sulphur cluster loop motif

phrase: HNDVVPDDIEILVTLPGVGSYTARAVAC
type: CONSERVED_SITE
name: HhH_motif
description: Helix-hairpin-helix motif

phrase: WQILVSEFMLQQTPAARVLAIWPDWVRRWPTPSATATASTADVLRAWGKLGYPRRAKRLHECATVIARDHNDVVPDDIEILVTLPGVGSYTARAVACFAYRQRVPVVDTNVRRVVARAVHGRADAGAPSVPRDHADVLALLPHRETAPEFSVALMEL
type: DOMAIN
name: HhH-GPD_domain
description: HhH-GPD domain

phrase: MLQQTPAARVLAIWPDWVRRWPTPSATATASTADVLRAWGKLGYPRRAKRLHECATVIARDHNDVVPDDIEILVTLPGVGSYTARAVACFAYRQRVPVVDTNVRRVVARAVHGRADAGAPSVPRDHADVLALLPHRETAPEFSVALMELGA
type: DOMAIN
name: HhH-GPD_domain
description: HhH-GPD domain

phrase: VSEFMLQQTPAARVLAIWPDWVRRWPTPSATATASTADVLRAWGKLGYPRRAKRLHECATVIARDHNDVVPDDIEILVTLPGVGSYTARAVACFAYRQRVPVVDTNVRRVVAR
type: DOMAIN
name: HhH-GPD_domain
description: HhH-GPD domain
Protein sequence:
MRYLPLTPEDRADMLGVIGAETIDALFVDVPAVAYRKDPVDLPFHAGELEVEREMLALSRRNRSASEGPFFVGAGAYRHHVPATVDHIIQRSEFLTSYTPYQPEIAQGTLQVLFEFQTQVAALTGMEVANASLYDGSTATAEAVMMATRVTRRGKAVLSGGVHPHYVGTVETLAHAAGVATERLKAAIDAEDAVIAAIDADTACVVVQTPNVFGTATDVSKIAAAAQAAGALLIVVTTEAVSYGLLKSPGEMGADIVVAEGQSIGNGLNFGGPYVGLFACKEKYVRQAPGRLCGETVDADGRRGFVLTLSTREQHIRRDKATSNICTNSGLCALAFSIHMSLLGEKGLRQLALVNHHKAVKLRDALAAVPGVEVLTPRFFNEFAIKVPGNAAELVETLAANGVIGGVPFSRLDPGAGLDNVLLVAATETTPDSDIALFSKALSKVLAPKGSNQ

Annotated regions:
phrase: MRYLPLTPEDRADMLGVIGAETIDALFVDVPAVAYRKDPVDLPFHAGELEVEREMLALSRRNRSASEGPFFVGAGAYRHHVPATVDHIIQRSEFLTSYTPYQPEIAQGTLQVLFEFQTQVAALTGMEVANASLYDGSTATAEAVMMATRVTRRGKAVLSGGVHPHYVGTVETLAHAAGVATERLKAAIDAEDAVIAAIDADTACVVVQTPNVFGTATDVSKIAAAAQAAGALLIVVTTEAVSYGLLKSPGEMGADIVVAEGQSIGNGLNFGGPYVGLFACKEKYVRQAPGRLCGETVDADGRRGFVLTLSTREQHIRRDKATSNICTNSGLCALAFSIHMSLLGEKGLRQLALVNHHKAVKLRDALAAVPGVEVLTPRFFNEFAIKVPGNAAELVETLAANGVIGGVPFSRLDPGAGLDNVLLVAATETTPDSDI
type: DOMAIN
name: GDC-P_N
description: Glycine cleavage system P-protein, N-terminal domain
Protein sequence:
MSGFQQHTGLVVPLDAANVDTDAIIPKQFLQKVNRTGFGKHLFHDWRFLDDAGEKANPEFVMNQPRYQDASILLARENFGCGSSREHAPWALADYGIRVMIAPSFADIFYGNSINNQMVPVRLTEQEVDELFTYVHDTEGATITVDLEALSVTANGKTYHFEIDDFRRHCLLNGLDNIGLTLQHEAKIAEYEAKIPSFLK

Annotated regions:
phrase: LDAANVDTDAIIPKQFLQKVNRTGFGKHLFHDWRFLDDAGEKANPEFVMNQPRYQDASILLARENFGCGSSREHAPWALADYGIRVMIAPSFADIFYGNSINNQMVPVRLTEQEVDELFTYVHDTEGATITVD
type: DOMAIN
name: IPMI_Swivel
description: 3-isopropylmalate dehydratase, swivel domain

phrase: MSGFQQHTGLVVPLDAANVDTDAIIPKQFLQKVNRTGFGKHLFHDWRFLDDAGEKANPEFVMNQPRYQDASILLARENFGCGSSREHAPWALADYGIRVMIAPSFADIFYGNSINNQMVPVRLT
type: DOMAIN
name: AconitaseA/IPMdHydase_ssu_swvl
description: Aconitase A/isopropylmalate dehydratase small subunit, swivel domain
Protein sequence:
MWHPALGPGWKPLLALAVAVTSLRGVRGIEEEPNSGGSFQIVTFKWHHVQDPYIIALWILVASLAKIVFHLSHKVTSVVPESALLIVLGLVLGGIVWAADHIASFTLTPTLFFFYLLPPIVLDAGYFMPNRLFFGNLGTILLYAVIGTIWNAATTGLSLYGVFLSGLMGELKIGLLDFLLFGSLIAAVDPVAVLAVFEEVHVNEVLFIIVFGESLLNDAVTVVLYNVFESFVTLGGDAVTGVDCVKGIVSFFVVSLGGTLVGVIFAFLLSLVTRFTKHVRIIEPGFVFVISYLSYLTSEMLSLSAILAITFCGICCQKYVKANISEQSATTVRYTMKMLASGAETIIFMFLGISAVDPVIWTWNTAFVLLTLVFISVYRAIGVVLQTWILNRYRMVQLETIDQVVMSYGGLRGAVAYALVVLLDEKKVKEKNLFVSTTLIVVFFTVIFQGLTIKPLVQWLKVKRSEQREPKLNEKLHGRAFDHILSAIEDISGQIGHNYLRDKWSNFDRKFLSKVLMRRSAQKSRDRILNVFHELNLKDAISYVAEGERRGSLAFIRSPSTDNMVNVDFSTPRPSTVEASVSYFLRENVSAVCLDMQSLEQRRRSIRDTEDMVTHHTLQQYLYKPRQEYKHLYSRHELTPNEDEKQDKEIFHRTMRKRLESFKSAKLGINQNKKAAKLYKRERAQKRRNSSIPNGKLPMENLAHNFTIKEKDLELSEPEEATNYEEISGGIEFLASVTKDVASDSGAGIDNPVFSPDEDLDPSILSRVPPWLSPGETVVPSQRARVQIPNSPSNFRRLTPFRLSNKSVDSFLQADGPEEQLQPASPESTHM

Annotated regions:
phrase: ILVASLAKIVFHLSHKVTSVVPESALLIVLGLVLGGIVWAADHIASFTLTPTLFFFYLLPPIVLDAGYFMPNRLFFGNLGTILLYAVIGTIWNAATTGLSLYGVFLSGLMGELKIGLLDFLLFGSLIAAVDPVAVLAVFEEVHVNEVLFIIVFGESLLNDAVTVVLYNVFESFVTLGGDAVTGVDCVKGIVSFFVVSLGGTLVGVIFAFLLSLVTRFTKHVRIIEPGFVFVISYLSYLTSEMLSLSAILAITFCGICCQKYVKANISEQSATTVRYTMKMLASGAETIIFMFLGISAVDPVIWTWNTAFVLLTLVFISVYRAIGVVLQTWILNRYRMVQLETIDQVVMSYGGLRGAVAYALVVLLDEKKVKEKNLFVSTTLIVVFFTVIFQGLTIKPLVQ
type: DOMAIN
name: Cation/H_exchanger_TM
description: Cation/H+ exchanger, transmembrane domain