nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSQFDRIHLVVLDSVGIGAAPDANDFVNAGVPDGASDTLGHISKTVGLAVPNMAKIGLGNIPRPQALKTVPAEESPSGYATKLQEVSLGKDTMTGHWEIMGLNITEPFDTFWNGFPEDIITKIEDFSGRKVIREANKPYSGTAVIDDFGPRQMETGELIIYTSADPVLQIAAHEDIIPLEELYRICEYARSITMERPALLGRIIARPYVGEPGNFTRTANRHDYAVSPFEDTVLNKLDQAGIDTYAVGKINDIFNGSGINHDMGHNKSNSHGIDTLIKTMGLSEFEKGFSFTNLVDFDALYGHRRDSHGYRDCLHEFDERLPEIISAMRDKDLLLITADHGNDPTYAGTDHTREYIPLLAYSPSFTGNGLIPVGHFADISATVADNFGVDTAMIGESFLQDLV

Annotated regions:
phrase: RIHLVVLDSVGIGAAPDANDFVNAGVPDGASDTLGHISKTVGLAVPNMAKIGLGNIPRPQALKTVPAEESPSGYATKLQEVSLGKDTMTGHWEIMGLNITEPFDTFWNGFPEDIITKIEDFSGRKVIREANKPYSGTAVIDDFGPRQMETGELIIYTSADPVLQIAAHEDIIPLEELYRICEYARSITMERPALLGRIIARPYVGEPGNFTRTANRHDYAVSPFEDTVLNKLDQAGIDTYAVGKINDIFNGSGINHDMGHNKSNSHGIDTLIKTMGLSEFEKGFSFTNLVDFDALYGHRRDSHGYRDCLHEFDERLPEIISAMRDKDLLLITADHGNDPTYAGTDHTREYIPLLAYSPSFTGNGLIPVGHFADISATVADNFGV
type: DOMAIN
name: Metalloenzyme
description: Metalloenzyme
Protein sequence:
MTVAKELRQKSSEELVKLVIKLKGELLEYRFKLAHGELDKPHLINQTRRLLATILTILTERKLNWQEEQAKYKLLTKKTNEAAVNAWKQHLEANKAKLLKSRAKREDASKK

Annotated regions:
phrase: KPHLINQTRRLLAT
type: CONSERVED_SITE
name: Ribosomal_uL29_CS
description: Large ribosomal subunit protein uL29, conserved site
Protein sequence:
MITPPRTPVGDDPVLDPVERAIADIAAGRPVVVVDDADRENEGDLVMAAEKATPEVIAFMMTECRGLICAPMEGADLDRLGLPQMVDDNTESHGTAFTVSVDAREGATTGISAADRALTLRLLADPATAPGDLVRPGHVFPLRAREGGVLTRNGHTEAGVDLARLAGLRPAAVICEIANEDGTMARLPELVPFARKHGLAIISIEDLIAHRRRSEPTVRREAATRLPTAHGDFQAFGYRSTVDGVEHIALVAGGLGPDGRLADGEDVLVRMHSECLTGDVFGSLRCDCGPQLQASLERVASEGRGVVLYLRGHEGRGIGLLHKLRAYELQELGHDTLDANLELGLPADARDYAAGAQILADLGVASLRLMTNNPDKSAALARHGIEVLGRVPMPVAAGEHNLRYLRTKRDRMGHDLPWLEAAAAAHTAQ

Annotated regions:
phrase: REAATRLPTAHGDFQAFGYRSTVDGVEHIALVAGGLGPDGRLADGEDVLVRMHSECLTGDVFGSLRCDCGPQLQASLERVASEGRGVVLYLRGHEGRGIGLLHKLRAYELQELGHDTLDANLELGLPADARDYAAGAQILADLGVASLRLMTNNPDKSAALARHGIEVLGRV
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MKEWPPNLAFHNKVIDGAAIKQLISRLIQRFGMLYTSHVLDQVKLLGFKQATASSISLGIDDLLTIPSKRWLVQDAQQQSFLLEKYYQYGNVHAVEKLRQSIEIWDAISAYLRQEMTPNFGMTDPLNPVHIMSFSGARGNASQVNQLIGMRGLMSDPLGQMIDLPIQSNLREGLSLTEYIISSYGARKGVVDTAIRTADAGYLTRRLVDVVQHIIVRGTDCGTTRGLSLSPQNGGVPESTQTLIGRVLAKDIYIGPRCIAVRNQDLGGGLVNRLITFKKKPIYVRTPFTCRSTSWICRFCYGRSPTSACGDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEQVRAPFNGKIKFNEDLVHPTRTRHGQPAFLCYIDLYLTIESEDIIHSVPIPPKSFLLVQNDQYVESEQVIAEISAGTSTFAFKDRVRKHIYSDSSGEMHSNTGMYHARKFPFSNVHILPKTSHLWILLGDLCGSGPVLFSMYKDQDQMSIHSLSVQGRNTPSLSVNNDQLKHRRLSLYDKNGTGGGSIPILNYSEMTRSLSTARCNLLYPAILHENFSLLAKKRRTRFLIPFQSIQEHRRKNERILCSDISIKIPRNGLFRGNSILAYFDDPRYKIGVSGITKYGTIEVDSIVTKESFINYGGVQPKDEGKVDPLFFIPEEVHIFPETSSIMVRNNSIIGINTKITLNKRSRVGGLVRVKKIHRGIKLQIFSGDISFPRKRDKRFIPQNKDILIPPQIRKRNFNKSKKAKNWIYVQKMRPTNKNSFFLLQPVVTYEIADGINLARLFPPDLLQEIDNIQLRVGNYIRYGDGELIPGISGKNPRIQLVRTFLVLNWDQDKKDSSIEEAHASFVEVSTKGMVRDFLRIHLRKSQIAYAYMRKRNDPSGSGFPSDNELDHSNRNPFSSSYPKARVRQSLNGTIRTLLNRNKECQSLLILSSSNCFRLGPFNNVKYHNPKKESIKRDTDPLIPIRNFSGPLGTVPQIANFDVFYHLITKNRISVFHYLPPEKGKLQVIQSFLMDENGRIYKSDPYSNIFLNPFNFNWYFLQHNYHKNYPNYCEETSTIINLGQFLFETVCIAKNGPRLKSGQVFILQVGYVIIRSGKPYLAIPGATVHGHSGQIVYGGDTLVTFIYEKARSADITQGLPKVDAMFEVRSKNSISMRLKARDEYWNEYITRNLGIYWGLLIGAKLTIAQSSLSLVNEIQKVYRSQGVQIDNRHIELIVRQITSKVLISEDGMSNLFLPGELIGLLQAERTGRALEKGICYRAILVGITKASLNTQSFISEASFQQTARVLAKAALRGRIDWLKGLKENVVLGGMSPAGTGFRGLVHPSSKKYKTLSLETQRKILFDGKVRDLLFHHKRIV

Annotated regions:
phrase: EKLRQSIEIWDAISAYLRQEMTPNFGMTDPLNPVHIMSFSGARGNASQVNQLIGMRGLMSD
type: DOMAIN
name: RNA_pol_Rpb1_4
description: RNA polymerase Rpb1, domain 4

phrase: LTIAQSSLSLVNEIQKVYRSQGVQIDNRHIELIVRQITSKVLISEDGMSNLFLPGELIGLLQAERTGRALEKGICYRAILVGITKAS
type: DOMAIN
name: RNA_pol_Rpb1_5
description: RNA polymerase Rpb1, domain 5

phrase: GLSLTEYIISSYGARKGVVDTAIRTADAGYLTRRLVDVVQHIIVRGTDCGTTRGLSLSPQNGGVPESTQTLIGRVLAKDIYIGPRCIAVRNQDLGGGLVNRLITFKKKPIYVRTPFTCRSTSWICRFCYGRSPTSACGDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGGTAEQVRAPFNGKIKFN
type: DOMAIN
name: RNA_pol_Rpb1_5
description: RNA polymerase Rpb1, domain 5
Protein sequence:
MQHGIKRVKLSEEAKRLKLEKDQIKIKNYRQLTDEIFELRANENYSDEALIKTNELLIINPEFYTIWNYRREILINNYSSSNDKDDQIYEDILNQDLNFVLVQLKKFPKCYWIWNHRRWLLFELVKLGKVNWKYEFGVVSKLLDLDQRNFHGWHYRRFVVKNMELECKNDTTLILKINLDEFNYTTLKIQKDFSNFSAWHNRTKLIPKIYNLIQQQQQQQQKDGKIFGDLPGIELFQNPILLLKNDLEMIKTGVYMSPEDTSVWLYLYWLLTDDLFTNAFKSHQQDYMNILHEQLQLINEVNEMEKEDTGQDNVGCLKSMIFINALIQNENNKPVLTEQVKSCLKQLAKIDPLRKNKYLDQLAGNAPIFHH

Annotated regions:
phrase: YSDEALIKTNELLIINPEFYTIWNYRREILINNY
type: REPEAT
name: Prenyl_trans_a
description: Protein prenyltransferase, alpha subunit

phrase: NQDLNFVLVQLKKFPKCYWIWNHRRWLLF
type: REPEAT
name: Prenyl_trans_a
description: Protein prenyltransferase, alpha subunit

phrase: WKYEFGVVSKLLDLDQRNFHGWHYRRFVVKN
type: REPEAT
name: Prenyl_trans_a
description: Protein prenyltransferase, alpha subunit

phrase: DEALIKTNELLIINPEFYTIWNYRREI
type: REPEAT
name: Prenyl_trans_a
description: Protein prenyltransferase, alpha subunit

phrase: DEFNYTTLKIQKDFSNFSAWHNRTKL
type: REPEAT
name: Prenyl_trans_a
description: Protein prenyltransferase, alpha subunit

phrase: INLDEFNYTTLKIQKDFSNFSAWHNRTKLIPKIY
type: REPEAT
name: Prenyl_trans_a
description: Protein prenyltransferase, alpha subunit

phrase: NWKYEFGVVSKLLDLDQRNFHGWHYRRFVVKNME
type: REPEAT
name: Prenyl_trans_a
description: Protein prenyltransferase, alpha subunit

phrase: ILNQDLNFVLVQLKKFPKCYWIWNHRRWLLFELV
type: REPEAT
name: Prenyl_trans_a
description: Protein prenyltransferase, alpha subunit
Protein sequence:
MPLPPDITFDSLALIKMHSQSMKKILEITLAKFTVNLSIVTVYRYLTVRAYLKKNIELELDVLKDIYNIVPLNEEIAIKAAQIEADLMRKGMMPDIEDVLTAATAIYTKSLLITDDSKRYEPMRRFGLDTMPLDKFVKEVELMVEKELI

Annotated regions:
phrase: KKILEITLAKFTVNLSIVTVYRYLTVRAYLKKNIELELDVLKDIYNIVPLNEEIAIKAAQIEADLMRKGMMPDIEDVLTAATAIYTKSLLITDDS
type: DOMAIN
name: PIN_dom
description: PIN domain
Protein sequence:
MASKPEKRVASSVFITLVPPRRDEAVVEEVRRAACEAWPGRPWESAPTKAPGAGSVGKLRSWMPPGRAAAPGPAVPPQLSNGGCSLPPPPLDVDDALPDLDLLPPPPPPPAADLPPPDEEPHSAMGASLISDLEQLHLPPPPPPPQALVEGPPLQPRPSHLKPAEEELPPPPEEPVSFPEREASTDICAFCHKTVSPRELAVEAMKRQYHAQCFTCRVCRRQLAGQSFYQKDGRPLCEPCYQDTLEKCGKCGEVVREHIIRALGQAFHPSCFTCVTCARRIGDESFALDSQNEVYCLDDFYRKFAPVCSICENPIIPRDGKDAFKIECMGRNFHENCYRCEDCRVLLSVEPTDQGCYPLNNRLFCKPCHVKRSAAGCC

Annotated regions:
phrase: CSICENPIIPRDGKDAFKIECMGRNFHENCYRCEDCRVL
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: CAFCHKTVSPRELAVEAMKRQYHAQCFTCRVCRRQ
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: KCGKCGEVVREHIIRALGQAFHPSCFTCVTCARRIGDESFALDSQNEVYCLD
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: VCSICENPIIPRDGKDAFKIECMGRNFHENCYRCEDCRVLLSVEPTDQGCYPLNNRLFCKP
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: ICAFCHKTVSPRELAVEAMKRQYHAQCFTCRVCRRQLAGQSFYQKDGRPLCEP
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: DICAFCHKTVSPRELAVEAMKRQYHAQCFTCRVCRRQLAGQSFYQKDGRPLCEPCYQDTLE
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: PVCSICENPIIPRDGKDAFKIECMGRNFHENCYRCEDCRVLLSVEPTDQGCYPLNNRLFCKPCHVKRSA
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: CSICENPIIPRDGKDAFKIECMGRNFHENCYRCEDCRVLLSVEPTDQGCYPLNNRLFCKPCHVK
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: CGKCGEVVREHIIRALGQAFHPSCFTCVTCARRIGDESFALDSQNEVYCLDDFYRK
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type

phrase: CAFCHKTVSPRELAVEAMKRQYHAQCFTCRVCRRQLAGQSFYQKDGRPLCEPCYQ
type: DOMAIN
name: Znf_LIM
description: Zinc finger, LIM-type
Protein sequence:
MRKLWAPNWLSAKRHHANQAATRLIGRHALMAWLAAALALSAGAAQAQLNVEISGVGASQIPVATANFQGEAQAPQNLTAIIRSDLARSGRLRNVDPGGATVAESANVDLGSWKSRGADAFVAGSVTPSGNGQYEVRFRLYDTVKGQSLGGLAFNVNQGQLRVTAHKIADYIYEKLLGERGVFATRLSYVSRVGGRYQLLISDSDGQNSQVALTSNEPIISPSWSPDGRRVAYVSFEAKKPVVYVHDLATGKRTLVSNQKGNNSAPSWSPDGQHLAVALSRDGNTQVYQVNADGSGIRRLTRSSAIDTEPQYSPDGKSIYFTSDRGGAPQVYRMPAGGEEAGSAQRVTFKGSYNVSPRISPDGKYLAYITRSGGFKLQLQDLTNGDVTSLTDTSNDEAPSFAANGKYILYATRVGGRSVLAAVSTDGRTRQVLSLQSGDVREPSWGPFMQ

Annotated regions:
phrase: LNVEISGVGASQIPVATANFQGEAQAPQNLTAIIRSDLARSGRLRNVDPGGATVAESANVDLGSWKSRGADAFVAGSVTPSGNGQYEVRFRLYDTVKGQS
type: DOMAIN
name: TolB_N
description: TolB, N-terminal

phrase: SLTDTSNDEAPSFAANGKYILYATRVGGR
type: REPEAT
name: PD40
description: WD40-like beta propeller

phrase: LTSNEPIISPSWSPDGRRVAYVSFEAKKPVVY
type: REPEAT
name: PD40
description: WD40-like beta propeller

phrase: RRLTRSSAIDTEPQYSPDGKSIYFTSDRGGAPQVY
type: REPEAT
name: PD40
description: WD40-like beta propeller

phrase: QRVTFKGSYNVSPRISPDGKYLAYIT
type: REPEAT
name: PD40
description: WD40-like beta propeller

phrase: LVSNQKGNNSAPSWSPDGQHLAVALSRDGNTQVY
type: REPEAT
name: PD40
description: WD40-like beta propeller
Protein sequence:
MNEQYSALRSNVSMLGKVLGETIKDALGEHILDRVETIRKLSKSSRAGNEANRQELLTTLQNLSNDELLPVARAFSQFLNLANTAEQYHSISPKGEAASNPEVIARTLRKLKNQPDLNDATIKKAVESLSLELVLTAHPTEITRRTLIHKMGEINNCLKQLDNTDIADYERHQVMRRLRQLIAQSWHTDEIRKQRPSPVDEAKWGFAVVENSLWQGVPNYLRELNEQLEENLGYKLPVDFVPVRFTSWMGGDRDGNPNVTADITRHVLLLSRWKATDLFLKDIHVLVSELSMVDATPELLALVGEEGASEPYRYLMKKLRARLMATQSWLEARLKGEKLPKPAGLLTQNEQLWEPLYACYQSLQACGMGIIANGELLDTLRRVKCFGVPLVRIDIRQESTRHTEALGEITRYLGIGDYESWSEADKQALLIRELNSKRPLLPRNWEPSNDTREVLETCKVIAEAPKGSIAAYVISMAKTPSDVLAVHLLLKEAGIGFAMPVAPLFETLDDLNNADDVMTQLLNIDWYRGLIQGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIKTCEKAGIELTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKYGLPEVTVSSLSLYTSAILEANLLPPPEPKDSWRHIMDELSVISCETYRGYVRENKDFVPYFRSATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLGAGTALQKVVEDGKQSELEAMCRDWPFFSTRLGMLEMVFSKADLWLADYYDQRLVAKTLWPLGKELRDLLEEDIKVVLAIANDSHLMADLPWIAESIQLRNVYTDPLNVLQAELLYRSRLTEEQGKSPDPRVEQALMVTIAGVAAGMRNTG

Annotated regions:
phrase: VMIGYSDSAKDA
type: ACTIVE_SITE
name: PEPCASE_His_AS
description: Phosphoenolpyruvate carboxylase, His active site

phrase: VLTAHPTEITR
type: ACTIVE_SITE
name: PEP_COase_Lys_AS
description: Phosphoenolpyruvate carboxylase, Lys active site
Protein sequence:
MHSSKARYLVFFQYYGTKYSGVMETPITQSVLGVQNYLEVAAQKLRPVGTIKFFISSRTDSGVHAICNLAHVDIERAKGKPPFTEEILVQAMNHHLQPEPIRLLKAIRVCDNFHARHNALSRTYVYRVAAGCSRPELPVFEGNLCWAIQDGLNVTAINEASKMLLGTHNFSAFRSANSENAFKSPIKTLQQADINPSCGILTHHWQSRNLQFWDFTFRARSFLYKQVRRMTGALVAVGQGRLTPQQIKEFLENQDPNCFLGNFVAPPHGLFLKDVEYDGTELNGFSAEETQKYSSHLN

Annotated regions:
phrase: ASKMLLGTHNFSAFRSANSENAFKSPIKTLQQADINPSCGILTHHWQSRNLQFWDFTFRARSFLYKQVRRMTGALVAVGQGRLTPQQIKEFLENQDPNCFLGNFVAPPHGLFLKDVEY
type: DOMAIN
name: PsdUridine_synth_TruA_a/b_dom
description: Pseudouridine synthase I, TruA, alpha/beta domain

phrase: FQYYGTKYSGVMETPITQSVLGVQNYLEVAAQKLRPVGTIKFFISSRTDSGVHAICNLAHVDIERAKGKPPFTEEILVQAMNHHLQPEPIRLLKAIRVCDNFH
type: DOMAIN
name: PsdUridine_synth_TruA_a/b_dom
description: Pseudouridine synthase I, TruA, alpha/beta domain
Protein sequence:
MSLKEKTQSLFANAFGYPATHTIQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISCAPRDDRNVRVMAADYENQLDEFSLDAPIVAHENYQWANYVRGVVKHLQLRNNSFGGVDMVISGNVPQGAGLSSSASLEVAVGTVLQQLYHLPLDGAQIALNGQEAENQFVGCNCGIMDQLISALGKKNHALLIDCRSLGTKAVSMPKGVAVVIINSNFKRTLVGSEYNTRREQCETGARFFQQPALRDVTIEEFNAVAHELDPIVAKRVRHILTENARTVEAASALEQGDLKRMGELMAESHASMRDDFEITVPQIDTLVEIVKAVIGDKGGVRMTGGGFGGCIVALIPEELVPAVQQAVAEQYEAKTGIKETFYVCKPSQGAGQC

Annotated regions:
phrase: GRVNLIGEHTD
type: CONSERVED_SITE
name: Galactokinase_CS
description: Galactokinase, conserved site

phrase: NYVRGVVKHLQLRNNSFGGVDMVISGNVPQGAGLSSSASLEVAVGTVLQQLYHLPLDGAQIALNGQEAENQFVGCNCGIMDQLISALG
type: DOMAIN
name: GHMP_kinase_N_dom
description: GHMP kinase N-terminal domain

phrase: VPQGAGLSSSA
type: CONSERVED_SITE
name: GHMP_knse_ATP-bd_CS
description: GHMP kinase, ATP-binding, conserved site

phrase: ASALEQGDLKRMGELMAESHASMRDDFEITVPQIDTLVEIVKAVIGDKGGVRMTGGGFGGCIVALIPEELVPAVQQAVAEQY
type: DOMAIN
name: GHMP_kinase_C_dom
description: GHMP kinase, C-terminal domain

phrase: LFANAFGYPATHTIQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISCA
type: DOMAIN
name: GalKase_N
description: Galactokinase, N-terminal domain
Protein sequence:
MSFYAAPIARLIEEFEKLPGIGHKTAQRLAFYVLDMPQEKVDRLANAITEAKQKTKFCSVCGNLTDTDVCPLCSSEKRDSSVICVVEDPRDVVAMEKIREFKGLYHVLHGAISPMQGIGPEDIKIKELLDRIKEGNVKEVIIATNPNIEGEATAMYISKLIKPLGVKTTRIAHGIPVGGDLEYADEVTLAKALEGRREI

Annotated regions:
phrase: SVICVVEDPRDVVAMEKIREFKGLYHVLHGAISPMQGIGPEDIKIKELLDRIKEGNVKEVIIATNPNIEGEATAMYISKLIKPLGVKTTRIAHGI
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: SVICVVEDPRDVVAMEKIREFKGLYHVLHGAISPMQGIGPEDIKIKELLDRIKEGNVKEVIIATNPNIEGEATAMYISKLIKPLGVKTTRI
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: CSVCGNLTDTDVCPLCSSEKR
type: DOMAIN
name: Rcmb_RecR_Znf
description: Recombination protein RecR, zinc finger domain

phrase: KFCSVCGNLTDTDVCPLCS
type: DOMAIN
name: Rcmb_RecR_Znf
description: Recombination protein RecR, zinc finger domain

phrase: SVICVVEDPRDVVAMEKIREFKGLYHVLHGAISPMQGIGPEDIKIKELLDRIKEGNVKEVIIATNPNIEGEATAMYISKLIKPLGVKTTRIAHGIPVGGDLEYADEVTLAK
type: DOMAIN
name: TOPRIM_RecR
description: RecR, TOPRIM domain

phrase: SVICVVEDPRDVVAMEKIREFKGLYHVLHGAISPMQGIGPEDIKIKELLDRIKEGNVKEVIIATNPNIEGEATAMYISKLIKPLG
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain
Protein sequence:
MNNNTTDNSTLQQIAHAAVEPLGFEVLEVQVQSQGGEKIVLVRVDRLDEQPVTMEDLTKASRAAEAEFDRLDPVAGEYRLEFESPGSKRPLTRARHFERMLGLKARVRGEGHAFTAPIKAVSGDQVTFDVSGQDVTVSASAVQANLAEFPDRHR

Annotated regions:
phrase: LTRARHFERMLGLKARVRGEGHAFTAPIKAVSGDQVTFDVSGQDVTVSASAV
type: DOMAIN
name: RimP_C
description: Ribosome maturation factor RimP, C-terminal

phrase: HAAVEPLGFEVLEVQVQSQGGEKIVLVRVDRLDEQPVTMEDLTKASRAAEAEFDRLDPVAGEYRLEFESP
type: DOMAIN
name: RimP_N
description: Ribosome maturation factor RimP, N-terminal
Protein sequence:
MSEKATEIANLLGPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPDRIINVDDCERVSREVSAQLDVEDPISGNYTLEVSSPGVDRPLFTLDQFARHVGESAKIVLKLAQDGRRRFQGQIVRIDTEAAAVVFSVDGKDVQIGFGNIDKARILPDWVALGLAPQKPNKPGPKKPGHDKKKPSNEPAAGKPRAE

Annotated regions:
phrase: GVDRPLFTLDQFARHVGESAKIVLKLAQDGRRRFQGQIVRIDTEAAAVVFSVDGKDVQIGFGNIDKARILPD
type: DOMAIN
name: RimP_C
description: Ribosome maturation factor RimP, C-terminal

phrase: LFTLDQFARHVGESAKIVLKLAQDGRRRFQGQIVRIDTEAAAVVFSVDGKDVQIGFGNIDKARILPD
type: DOMAIN
name: RimP_C
description: Ribosome maturation factor RimP, C-terminal

phrase: LGPTVESLGLELLGVEYLPAPGGATLRLYIDVPLAEQPDRIINVDDCERVSREVSAQLDVEDPISGNYTLEVSSPGV
type: DOMAIN
name: RimP_N
description: Ribosome maturation factor RimP, N-terminal
Protein sequence:
MDKKRRLEEINNLKIFSGNANSVLAEKICEHLSIRLGNAYVGRFPDGEIDLKVNEDVRGADVFLVQPTCPPVNENLAELLIFIDCLKRASAARITAVLPYYGYARKDRKDEGRVPITAKLVANLITESGADRVLTVDLHAAQIQGFFDIPVDHLLAFPVLSKYFERLKSEDLVVVTPDVGGIKLARNYSKKLGIKMAVVDKRRVGPDETQIGFVIGDVNNKDVIMIDDLIATGGSIVQAANVLKERGAKDIYVGATHPVFCGSAVEKLSAAPIKEIIVTDTIPLTEEAKSYHDKIKVLSISELLGDAIMRIHRHESVSSLFV

Annotated regions:
phrase: DLHAAQIQGFFDIPV
type: CONSERVED_SITE
name: PRib_PP_synth_CS
description: Phosphoribosyl pyrophosphate synthetase, conserved site

phrase: PVLSKYFERLKSEDLVVVTPDVGGIKLARNYSKKLGIKMAVVDKRRVGPDETQIGFVIGDVNNKDVIMIDDLIATGGSIVQAANVLKERGAKDIYVGATHPVFCGSAVEKLSAAPIKEIIVTD
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: LKIFSGNANSVLAEKICEHLSIRLGNAYVGRFPDGEIDLKVNEDVRGADVFLVQPTCPPVNENLAELLIFIDCLKRASAARITAVLPYYGYARKDRKDEGRVPITAKLVANLITES
type: DOMAIN
name: Pribosyltran_N
description: Ribose-phosphate pyrophosphokinase, N-terminal domain
Protein sequence:
MAECVVHDWQGKEAGKASLELKVSKETTAVDLMHRAVLRQQAHSRQGTASTLTRAEVRGGGRKPYKQKGTGRARQGTIRTPLRPGGGIIFGPKPRTYNLAMNRKERRLALRTALMARIEDVIVVKDFGNSLKVPKTREISDALIRLGLAADAKVLIILSTPSEIIRRSVRNLEKVKLIAADQLNVFDLLHANSLVLSEEALAKIQEVYGDD

Annotated regions:
Protein sequence:
MFSEQAAQRAHTLLSPPSANNATFARVPVATYTNSSQPFRLGERSFSRQYAHIYATRLIQMRPFLENRAQQHWGSGVGVKKLCELQPEEKCCVVGTLFKAMPLQPSILREVSEEHNLLPQPPRSKYIHPDDELVLEDELQRIKLKGTIDVSKLVTGTVLAVFGSVRDDGKFLVEDYCFADLAPQKPAPPLDTDRFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLTKKTQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQNVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFPECPHVYFCGNTPSFGSKIIRGPEDQTVLLVTVPDFSATQTACLVNLRSLACQPISFSGFGAEDDDLGGLGLGP

Annotated regions:
phrase: VLLVSGLGLGGGGGESLLGTQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLTKKTQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQNVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFPECPHVYFCGNTPSF
type: DOMAIN
name: DNA_pol_a/d/e_bsu
description: DNA polymerase alpha/delta/epsilon, subunit B

phrase: TQLLVDVVTGQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLTKKTQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAYSTLQLVTNPYQATIDGVRFLGTSGQNVSDIFRYSSMEDHLEILEWTLRVRHISPTAPDTLGCYPFYKTDPFIFPECPHVYFCGNTPSFGSKIIRGPEDQTVLLVTVPDFSATQTACLVNLRSLACQPIS
type: DOMAIN
name: PolD2_C
description: DNA polymerase delta subunit 2, C-terminal domain

phrase: QYAHIYATRLIQMRPFLENRAQQHWGSGVGVKKLCELQPEEKCCVVGTLFKAMPLQPSILREVSEEHNLLPQPPRSKYIHPDDELVLEDELQRIKLKGTIDVSKLVTGTVLAVFGSVRDDGKFLVED
type: DOMAIN
name: DNA_pol_D_N
description: DNA polymerase delta subunit, OB-fold domain
Protein sequence:
MPGPLRVLITGAAGQIAYNLSNMVANGNLFGKDQQIILHLLDIPEAKTVLDGVVMELQDCAFTVLAGIVPTHCLKEAFTDIDVALMVGAMPRKQGMERRDLLSSNVKIFKEQGEALDKYAKKTVKVLVVGNPANTNCLIMSKYAPSIPKENFTALTRLDHNRAIYQVAAKAGVPNTCVKNVCIWGNHSNKQFPDLSHAVVTKDGKQHPAKELINDEKWVKEVFIPCVQNRGAAVIGLRKLSRAASAAKAIVDQMRDWWFGTKEGEWVSMSVYSTGDHYGAPKDIYFSFPVTIKDGHYKVVDGLSMDEWSRSLFNLSADELVDEREVALASFK

Annotated regions:
phrase: RVLITGAAGQIAYNLSNMVANGNLFGKDQQIILHLLDIPEAKTVLDGVVMELQDCAFTVLAGIVPTHCLKEAFTDIDVALMVGAMPRKQGMERRDLLSSNVKIFKEQGEALDKYAKKTVKVLVVGNPANTNCLIMSKYAPSIPKEN
type: DOMAIN
name: Lactate/malate_DH_N
description: Lactate/malate dehydrogenase, N-terminal

phrase: TRLDHNRAIYQVAAKAGVPNTCVKNVCIWGNHSNKQFPDLSHAVVTKDGKQHPAKELINDEKWVKEVFIPCVQNRGAAVIGLRKLSRAASAAKAIVDQMRDWWFGTKEGEWVSMSVYSTGDHYGAPKDIYFSFPVTIKDGHYKVVDGLSMDEWSRSLFNLSADELVDER
type: DOMAIN
name: Lactate/malate_DH_C
description: Lactate/malate dehydrogenase, C-terminal

phrase: LTRLDHNRAIYQ
type: ACTIVE_SITE
name: Malate_DH_AS
description: Malate dehydrogenase, active site
Protein sequence:
MRYLTAGESHGPGLTTIIEGLPAGMPLLAEDVNKELKRRQGGHGRGARMRIEKDQVQITAGIRHGKTLGAPVAMFVENKDWKHWETVMSIEPVPEKNEKSRRVSRPRPGHADLVGGMKYGHNDMRNVLERSSARETTVRVAAGAVAKKLLHELGIEVAGHVLEIGGTRANLTRDYAVREIQETSEASPVRCLDGVAAEEMMQKIDDAKKNGDTIGGIVEVVVGGVPAGLGSYVQWDKKLDAKIARAIVSINAFKGAEFGVGFEAARKPGSEVMDEILWSKEDGYTRRTNNLGGFEGGMTNGMPIVVRGVMKPIPTLYKPLQSVDIDSKETFNASVERSDSCAVPAASVVAEAVVAWEVAVAVLEKFDGDRFDTLKKHVEEHRNLTKEF

Annotated regions:
phrase: ERSSARETTVRVAAGA
type: CONSERVED_SITE
name: Chorismate_synthase_CS
description: Chorismate synthase, conserved site

phrase: RSDSCAVPAASVVAEA
type: CONSERVED_SITE
name: Chorismate_synthase_CS
description: Chorismate synthase, conserved site

phrase: GESHGPGLTTIIEGL
type: CONSERVED_SITE
name: Chorismate_synthase_CS
description: Chorismate synthase, conserved site
Protein sequence:
MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTASQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDAHPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDTGPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHATERGGIRALSEWLNENTDLDVTFIDIPNPA

Annotated regions:
Protein sequence:
NNLPSHSEVIQLYKSRNIGRLRLYDPNHGALNALRGSNIEVILGLPNVDVKHIASGMEHARWWVQKNVKDFWPDVKIKYIAVGNEISPVTGTSSLTSFQVPALVNIYKAIGEAGLGNDIKVSTSVDMTLIGNSYPPSQGSFRNDVRWFTDPIVGFLRDTRAPLLVNIYPYFSYSGNPGQISLPYALFTAPNVVVQDGSRQYRNLFDAMLDSVYAAMERTGGGSVGIVVSESGWPSAGAFGATQDNAATYLRNLIQHAKEGSPRKPGPIETYIFAMFDENNKNPELEKHFGLFSPNKQPKYNLNFGVSERVWDISAETNSTTSSLISEM

Annotated regions:
Protein sequence:
MRVRGIQRNWPQWWIWSILGLWMVIICRGNENLWVTVYYGVPVWKEAKTTLFCASDAKAYEKEVHNVWATHACVPTDPNPQEIVLKNVTESFNMWENDMVDQMHEDIISIWDQSLKPCVKITPLCVTLNCTNANLNCTNDNCNRTVDKMREEIKNCSFNTTTEIRDKKQKEYALFYKPDIVPLNGNNSFYILINCNTSTITQACPKVSFDPIPLHYCAPAGYAILKCNDKTFDGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEEEIIISSENLTNNAKTIIVHLKESVEIECTRPGNNIRRSIRIGPGQTFFATGDITGDIRQAYCNINNTKWNQTLEEVKKKLQDHFNKTIEFNSSSGGDLEITTHSFNCGGEFFYCNTTGLFSNNGSTQNETITLPCRIKQIVNMWQGVGRAMYAPPIAGTITCKSNITGLLLLRDGGDTSTNGTEIFRPGGGNMKDNWRSELYKYKVVEIKPLGVAPTTAKRRVVEREKRAVGIGAVLFGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQARVLAIERYLKDQQLLGLWGCSGKLICTTTVPWNSSWSNKSNTEIWENMTWMQWDREINNYTNTIYRLLEESQTQQEKNEKDLLALDSWDSLWSWFSITKWLWYIKIFIMIVGGLIGLRIIFGVLSIVKRVRQGYSPLSFQTLTPNPRELDRLGRIEEEGGEQDRDRSIRLVNGFLALAWDDLRSLCLFSYHQLRNLILVTARAVE

Annotated regions:
phrase: VQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQARVLAIERYLKDQQLLGLWGCSGKLICTTTVPWNSSWSNKSNTEIWENMTWMQWDREINNYTNTIYRLLEESQTQQEKNEKDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKEAKTTLFCASDAKAYEKEVHNVWATHACVPTDPNPQEIVLKNVTESFNMWENDMVDQMHEDIISIWDQSLKPCVKITPLCVTLNCTNANLNCTNDN
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: NRTVDKMREEIKNCSFNTTTEIRDKKQKEYALFYKPDIVPLNGNNSFYILINCNTSTITQACPKVSFDPIPLHYCAPAGYAILKCNDKTFDGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEEEIIISSENLTNNAKTIIVHLKESVEIECTRPGNNIRRSIRIGPGQTFFATGDITGDIRQAYCNINNTKWNQTLEEVKKKLQDHFNKTIEFNSSSGGDLEITTHSFNCGGEFFYCNTTGLFSNNGSTQNETITLPCRIKQIVNMWQGVGRAMYAPPIAGTITCKSNITGLLLLRDGGDTSTNGTEIFRPGGGNMKDNWRSELYKYKVVEIKPLGVAPTTAKRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: MGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQARVLAIERYLKDQQLLGLWGCSGKLICTTTVPWNSSWSNKSNTEIWENMTWMQWDREINNYTNTIYRLLEESQTQQEKNEKDLLALDSWDSLWSWFSITKWLWYIKIFIMIVGGLIGLRIIFGVLSIVKRVRQGYSPLSFQTL
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MIPILTKESLRQAQKKNDLDNTLPLVQQAGHQLTLFIKKKCTQYSTILVLLGPGNKGLDALCAVDLLSTQGYIIWILTTENVANFRQLSQRYKHNGNIKLIQKWEFHQFDLILDGLFGIGLNRGLTEPYSNWLRLSNQISTVKIAIDIPSGLMCDTGIAYSDTFQADHTYSLIAGKIGLYTADGPDYCGEIVEDDLNIAVLPDGFTLSKPITHFSWRTQQKNTHKGMFGNIGIIGGAKGMIGASFLTAEACLHSGAGRVWLSALDDSAENMAPLFNPQIMTKSLFELIDSKLDCLIIGPGTNASDFDERIIHSVINVPYPILLDAGFLPLLKDSQLIEQLSHRCQPTIITPHPGEAGQILNRKVISRVEDAKYLSQLLKAWVVLKGQGTVISSPEQRWWINTTGNSALSIPGSGDILCGVIGSLISRCTHLEFALLNAVNIHGQAAMDYQNQYCGTIGMSYRELLFYIRSNLNKL

Annotated regions:
phrase: SKPITHFSWRTQQKNTHKGMFGNIGIIGGAKGMIGASFLTAEACLHSGAGRVWLSALDDSAENMAPLFNPQIMTKSLFELIDSKLDCLIIGPGTNASDFDERIIHSVINVPYPILLDAGFLPLLKDSQLIEQLSHRCQPTIITPHPGEAGQILNRKVISRVEDAKYLSQLLKAWVVLKGQGTVISSPEQRWWINTTGNSALSIPGSGDILCGVIGSLISRCTHLEFALLNAVNIHGQAAMDYQNQYCGTIGMSYRELLFYIRSNL
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: TKESLRQAQKKNDLDNTLPLVQQAGHQLTLFIKKKCTQYSTILVLLGPGNKGLDALCAVDLLSTQGYIIWILTTENVANFRQLSQRYKHNGNIKLIQKWEFHQFDLILDGLFGIGLNRGLTEPYSNWLRLSNQISTVKIAIDIPSGLMCDTGIAYSDTFQADHTYSLIAGKIGLYTADGPDYCGEIVEDDLNIAVLPD
type: DOMAIN
name: YjeF_N_dom
description: YjeF N-terminal domain

phrase: LVQQAGHQLTLFIKKKCTQYSTILVLLGPGNKGLDALCAVDLLSTQGYIIWILTTENVANFRQLSQRYKHNGNIKLIQKWEFHQFDLILDGLFGIGLNRGLTEPYSNWLRLSNQISTVKIAIDIPSGLMCDTGIAYSDTFQADHTYSLIAGK
type: DOMAIN
name: YjeF_N_dom
description: YjeF N-terminal domain

phrase: RTQQKNTHKGMFGNIGIIGGAKGMIGASFLTAEACLHSGAGRVWLSALDDSAENMAPLFNPQIMTKSLFELIDSKLDCLIIGPGTNASDFDERIIHSVINVPYPILLDAGFLPLLKDSQLIEQLSHRCQPTIITPHPGEAGQILNRKVISRVEDAKYLSQLLKAWVVLKGQGTVISSPEQRWWINTTGNSALSIPGSGDILCGVIGSLISRCTHLEFALLNAVNIHGQAAMDYQNQYCGTIGMSYRELLFYIR
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: GIIGGAKGMIGASFLTAEACLHSGAGRVWLSALDDSAENMAPLFNPQIMTKSLFELIDSKLDCLIIGPGTNASDFDERIIHSVINVPYPILLDAGFLPLLKDSQLIEQLSHRCQPTIITPHPGEAGQILNRKVISRVEDAKYLSQLLKAWVVLKGQGTVISSPEQRWWINTTGNSALSIPGSGDILCGVIGSLISRCTHLEFALLNAVNIHGQAAMDYQNQYC
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: SKPITHFSWRTQQKNTHKGMFGNIGIIGGAKGMIGASFLTAEACLHSGAGRVWLSALDDSAENMAPLFNPQIMTKSLFELIDSKLDCLIIGPGTNASDFDERIIHSVINVPYPILLDAGFLPLLKDSQLIEQLSHRCQPTIITPHPGEAGQILNRKVISRVEDAKYLSQLLKAWVVLKGQGTVISSPEQRWWINTTGNSALSIPGSGDILCGVIGSLISRCTHLEFALLNAVNIHGQAAMDYQNQYCGTIGMSYRELLFYIRSNLNK
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: KNTHKGMFGNIGIIGGAKGMIGASFLTAEACLHSGAGRVWLSALDDSAENMAPLFNPQIMTKSLFELIDSKLDCLIIGPGTNASDFDERIIHSVINVPYPILLDAGFLPLLKDSQLIEQLSHRCQPTIITPHPGEAGQILNRKVISRVEDAKYLSQLLKAWVVLKGQGTVISSPEQRWWINTTGNSALSIPGSGDILCGVIGSLISRCTHLEFALLNAVNIHGQA
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase
Protein sequence:
MELSESVQKGFQMLADPRSFDSNAFTLLLRAAFQSLLDAQADEAVLDHPDLKHIDPVVLKHCHAAAATYILEAGKHRADKSTLSTYLEDCKFDRERIELFCTEYQNNKNSLEILLGSIGRSLPHITDVSWRLEYQIKTNQLHRMYRPAYLVTLSVQNTDSPSYPEISFSCSMEQLQDLVGKLKDASKSLERATQL

Annotated regions:
phrase: SLPHITDVSWRLEYQIKTNQLHRMYRPAYLVTLSVQNTDSPSYPEISFSCSMEQLQDLVGKLKD
type: DOMAIN
name: COMM
description: COMM domain

phrase: HITDVSWRLEYQIKTNQLHRMYRPAYLVTLSVQNTDSPSYPEISFSCSMEQLQDLVGKLKDASKSLERA
type: DOMAIN
name: COMM
description: COMM domain