nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MVKDTLFSTPIAKLGDFIFDENVAEVFPDMIQRSVPGYSNIITAIGMLAERFVTADSNVYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHVEIKNASMVILNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSEKFRFEDTKINHLLIDLHHQFKRANGYSELEVSQKRTALENVMRTDSIETHKVRLKNVGFSQVELWFQCFNFGSMIAVK

Annotated regions:
phrase: VYDLGCSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCNDIRHVEIKNASMVILNFTLQFLPPEDRIALLTKIYEGLNPN
type: DOMAIN
name: Methyltransf_25
description: Methyltransferase domain 25
Protein sequence:
MNALNAAMTVIGAGSYGTALAITLARNGHHVVLWGHDPKHIATLQHDRCNAAFLPDVPFPDTLHLESDLATALAASRDILVVVPSHVFGQVLRQIKPLMRSDARLVWATKGLEAETGRLLQDVAREALGDDIPLAVISGPTFAKELAAGLPTAISLAATDPQFAEDLQRLLHCGKSFRVYINPDFIGVQLGGAVKNVIAIGAGMSDGIGFGANARTALITRGLVEMSRLGAALGADPETFMGMAGLGDLVLTCTDNQSRNRRFGMMLGQGMDVQSAQDKIGQVVEGYRNTKEVRVLAQRLGVEMPITEEIYQVLYCGKIAREAALTLLGRARKDERSSN

Annotated regions:
phrase: DFIGVQLGGAVKNVIAIGAGMSDGIGFGANARTALITRGLVEMSRLGAALGADPETFMGMAGLGDLVLTCTDNQSRNRRFGMMLGQGMDVQSAQDKIGQVVEGYRNTKEVRVLAQRLGVEMPITEEIYQVLYCGKIARE
type: DOMAIN
name: G3P_DH_NAD-dep_C
description: Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal

phrase: MTVIGAGSYGTALAITLARNGHHVVLWGHDPKHIATLQHDRCNAAFLPDVPFPDTLHLESDLATALAASRDILVVVPSHVFGQVLRQIKPLMRSDARLVWATKGLEAETGRLLQDVAREALGDDIPLAVISGPTFAKELAAGLPTAISLAATDPQ
type: DOMAIN
name: G3P_DH_NAD-dep_N
description: Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal
Protein sequence:
MSTSFMKSPRLFFTSESVTEGHPDKICDQVSDAVLDAFLTHDPRARVACETATTTGLIVVIGEVTYEQGYIPIEEIVRKTVKDIGYTDASYGFDADTCGVMVAIHGQSPDIAQGVDRALEVRGDGYVTDEEVATIGAGDQGMMFGFACNETPELMPLPIALAHRIGRRLSRLRKEGVLPYLRPDGKSQVTVEYSYGRPVRVDTVLVSNQHAPDVTQDQIRHDIIHQVIHAVVPPELIDEKTKYFVNPTGRFVIGGPMGDSGLTGRKIIVDTYGGMARHGGGAFSGKDPTKVDRSAAYACRWVAKNVVAAGLADRFEIQVAYAIGVAHPLSISVECFGTNKVSEETILRLINEHFDLRPGAIIRDLRLRRPIYRPTAAYGHFGRDDIDAPWEQTDRAEALRRAAGL

Annotated regions:
phrase: IGGPMGDSGLTGRKIIVDTYGGMARHGGGAFSGKDPTKVDRSAAYACRWVAKNVVAAGLADRFEIQVAYAIGVAHPLSISVECFGTNKVSEETILRLINEHFDLRPGAIIRDLRLRRPIYRPTAAYGHFGRDDIDAPWE
type: DOMAIN
name: S-AdoMet_synt_C
description: S-adenosylmethionine synthetase, C-terminal

phrase: GAGDQGMMFG
type: CONSERVED_SITE
name: ADOMET_SYNTHASE_CS
description: S-adenosylmethionine synthetase, conserved site

phrase: LFFTSESVTEGHPDKICDQVSDAVLDAFLTHDPRARVACETATTTGLIVVIGEVTYEQGYIPIEEIVRKTVKDIGYTDASYGFDADTCGVMVAIHGQS
type: DOMAIN
name: S-AdoMet_synt_N
description: S-adenosylmethionine synthetase, N-terminal

phrase: GGGAFSGK
type: CONSERVED_SITE
name: ADOMET_SYNTHASE_CS
description: S-adenosylmethionine synthetase, conserved site

phrase: IGAGDQGMMFGFACNETPELMPLPIALAHRIGRRLSRLRKEGVLPYLRPDGKSQVTVEYSYGRPVRVDTVLVSNQHAPDVTQDQIRHDIIHQVIHAVVPPELIDEKTKYFVNPTGR
type: DOMAIN
name: S-AdoMet_synt_central
description: S-adenosylmethionine synthetase, central domain
Protein sequence:
MSDAPAVGAFPQTPVAARRGPARPSDSTTSTTIKRTSPLPLAPQAGRQATNISPVIPLHILDAPTQRFYAFAFYLALTAWKLYDWTQVLEEDTESFLLFLKWIAIDCVFLFGLPELRIPWLELSQPFVMVAFAIHAMFDWILMFNIGFPWQSWVIGLLKVFYDREIAISEHNVKLSSILQNSSLIMGRQIINILPEGSAILNPELQPFCLGGDRKTANIPIFFNSTIPVEVELIRTDFETGQQESIKLSKSQLRDIERRAKRESQDGDTVQSIVQFDFPVKKTGAYRLGRVLDEYKLEVQRRNPLTFVVSCPKAWVGPALSAHRCVGDLSDLSMMVEGTPPLKIKYSRMINGKDHSFHFQSLQPEGFVSPLSGLRSNNWGYDEDDISWARAQKVPVGLNESMHSSGDWQYSIDEVQDGFGNIIKYDSLADDPDGKPKPKHLTQSFVVKKRPVIRLEGCDLRHPLKVAKGKSKNLPVSYGLSGGSREDSTYQIAWQFSPIDTLTESGDHGDVVTIGTYTAKNNRDRPTISAPGLYTLKSVSASQCEGEIQEPSSCLLLNPLEPRLSLRHEEIPDTCAGNSIGLRVDLDLIGTPPFIVRYDVISNGERRSERVSIPGLRYQLDLVPRIAGHHKYIFTHVGDSIYDGQKLSGPEYVLEQDVKPAAAALIQHSTGKMSSCLGDQVTVDILLLGDPPFTLEWELIHDGKRKQFKVPNIQENSYQIKTAPLTTGGEYTLGLTSVQDKRGCRNFLQEELKISVRRQSPRAAFGQV

Annotated regions:
phrase: DAPTQRFYAFAFYLALTAWKLYDWTQVLEEDTESFLLFLKWIAIDCVFLFGLPELRIPWLELSQPFVMVAFAIHAMFDWILMFN
type: DOMAIN
name: TMD_POM152
description: Nucleoporin POM152, N-terminal transmembrane domain

phrase: RPVIRLEGCDLRHPLKVAKGKSKNLPVSYGLSGGSREDSTYQIAWQFSPIDTLTESGDHGDVVTIGTYTAKNNRDRPTISAPGLYTLKSVSASQCEGEIQEPSS
type: DOMAIN
name: Ig-like_POM152
description: Nucleoporin POM152, Ig-like domain

phrase: NPLEPRLSLRHEEIPDTCAGNSIGLRVDLDLIGTPPFIVRYDVISNGERRSERVSIPGLRYQLDLVPRIAGHHKYIFTHVGDSIYDGQKLSGPEYVLEQDVK
type: DOMAIN
name: Ig_POM152
description: Nucleoporin POM152, immunoglobulin-like domain

phrase: SAILNPELQPFCLGGDRKTANIPIFFNSTIPVEVELIRTDFETGQQESIKLSKSQLRDIERRAKRESQDGDTVQSIVQFDFPVKKTGAYRLGRVLDEYKLEVQRRNPLTF
type: DOMAIN
name: Ig-like_POM152_1st
description: Nucleoporin POM152, first Ig-like domain
Protein sequence:
MVGQRVRTRFAPSPTGYLHVGGLRTALYNYLFAKKMHGDFIIRIEDTDQTRKVEGAQQNLIKALEWAGIVADESPEKGGNYGPYVQSERLDLYGRYCQQLLDDQHAYYCFATHEELEENRQLQIKQGLQPKYNRKWLPEEMGGSMPPSVIRKKLDEGGPYVIRMKVPDYVSVWFEDIIRGPVEFDSATIDDQVLMKSDGFPTYHFASVIDDHLMEFTHIIRGEEWLSSMPKHLLLYEFFGWEPPKVAHLPLLLNADRSKLSKRQGDVAVEDYIRKGYSNDAIINFVAMLGWNEGEGSEQEVYSMEQLIEKFSLERVGKAGAVFNIDKLNWLEKQYIKNRPTEQLVPVIKPILLAELERKETMMPVDLITSEAYLEKVIELMRERVGFEHEFVTFSSYFFFEPDSYDEEAVKKRWAPDTNSLLQEFTEILATLEEFSAENIEAHLKEFVAPKGLKAAALIHPLRIVSSGVSFGPSLYHMLEVLGKETVLRRILKGREKITFSA

Annotated regions:
phrase: PSPTGYLHVGG
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: VRTRFAPSPTGYLHVGGLRTALYNYLFAKKMHGDFIIRIEDTDQTRKVEGAQQNLIKALEWAGIVADESPEKGGNYGPYVQSERLDLYGRYCQQLLDDQHAYYCFATHEELEENRQLQIKQGLQPKYNRKWLPEEMGGSMPPSVIRKKLDEGGPYVIRMKVPDYVSVWFEDIIRGPVEFDSATIDDQVLMKSDGFPTYHFASVIDDHLMEFTHIIRGEEWLSSMPKHLLLYEFFGWEPPKVAHLPLLLNADRSKLSKRQGDVAVEDYIRKGYSNDAIINFVAMLGWNEGEGSEQEVYSMEQLIEKFSLERVGKAGAVFNIDKLN
type: DOMAIN
name: Glu/Gln-tRNA-synth_Ib_cat-dom
description: Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain

phrase: VRTRFAPSPTGYLHVGGLRTALYNYLFAKKMHGDFIIRIEDTDQTRKVEGAQQNLIKALEWAGIVADESPEKGGNYGPYVQSERLDLYGRYCQQLLDDQHAYYCFATHEELEENRQLQIKQGLQPKYNRKWLPEEMGGSMPPSVIRKKLDEGGPYVIRMKVPDYVSVWFEDIIRGPVEFDSATIDDQVLMKSDGFPTYHFASVIDDHLMEFTHIIRGEEWLSSMPKHLLLYEFFGWEPPKVAHLPLLLNADRSKLSKRQGDVAVEDYIRKGYSNDAIINFVAMLGWNEGEGSEQEVYSMEQLIEKFSLERVGKAGAVFNIDKLNWLEKQYIK
type: DOMAIN
name: GluRS_core
description: Glutamyl-tRNA synthetase

phrase: VDLITSEAYLEKVIELMRERVGFEHEFVTFSSYFFFEPDSYDEEAVKKRWAPDTNSLLQEFTEILATLEEFSAENIEAHLKEFVAPKGLKAAALIHPLRIVSSGVSFGPSLYHMLEVLGKETVLRRIL
type: DOMAIN
name: aa-tRNA-synth_I_cd-bd
description: Aminoacyl-tRNA synthetase, class I, anticodon-binding
Protein sequence:
MNADSKAPDFLVVIPARLGSTRLPRKPLADIGGKPMVIRVAERAKQSLAHSVVVATDSPEIQAACDEHRIECLLTSENHPTGTDRIAEVAQLLKLPANALVVNVQGDEPLIPPKLINQVARTLAEHEQCVISTVAVPITDAAEINNPNVVKVVLNRSGEALYFSRAPIPFVRDPQSSQKTMHLRHLGIYAYRADFLQAYTRLEPASPEQAEALEQLRALWNGYRIAVHTAPEAPPAGVDTPEDLERVRQLLARS

Annotated regions:
Protein sequence:
MSMSHFNTIEEAIEEIKQGRIIIVCDDEDRENEGDFVMAAEKVTPKAINFMAREGRGLICLPVIGERLDELELRAMVSDSTAKHGTSYTVSIDARHGTTTGISAHDRARTILAVVDPATRPEDLARPGHVFPLRAARGGVLRRAGHTEATVDLSRLAGLYPAGVLCEIMDEDGTMARVPSLLKIADRHGLTIVTVKDLIEYRRTKEKLVERVVTTPLPTAYGEFTLIVYESVLDQYHHLALVKGEVAGKEGVLVRVHSQCLTGDVFGSHRCDCGPQLAEALRAIEREGQGVFLYMRQEGRSLGLLNKLRAYQLQDRGLDTVEANLALGLETDPRDYGIGAQILVDLGLSTIRLLTNNPRKIVGLEGYGLRVVERVPIEVGQTQANIDYLRAKKLKLGHLLDRIDS

Annotated regions:
phrase: ERVVTTPLPTAYGEFTLIVYESVLDQYHHLALVKGEVAGKEGVLVRVHSQCLTGDVFGSHRCDCGPQLAEALRAIEREGQGVFLYMRQEGRSLGLLNKLRAYQLQDRGLDTVEANLALGLETDPRDYGIGAQILVDLGLSTIRLLTNNPRKIVGLEGYGLRVVERV
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MDFLPLFHNLQGRTVLVVGGGEVALRKARLLADAGAQLRVVAPEIEAQLTELVGQKGGETWVRGYRESDLAGCVLVIAATDDQPLNAQVSEDAKARGLPVNVVDAPALCTVIFPAIVDRSPLIVAVSSGGDAPVLARLIRAKIETWIPAAYGQLAGLAKRFRTQVKALLPNVQQRRVFWEEVFQGPIAEQVLAGRTTKAQQLLESKLSGAAPQALGEVYLVGAGPGDPDLLTFRALRLMQQADVVLYDRLVSPAIIELCRRDAERIYVGKQRADHALPQEQINQQLVALAQQGKRVLRLKGGDPFIFGRGGEEIEELAEHGIPFQVVPGITAASGCAAYAGIPLTHRDHAQSVRFVTGHLKDGSCDLPWTELAAPRQTLVFYMGLVGLPVICAQLIRHGRAGSTPAALIQQGTTAKQRVFTGTLANLPELVARHEVHAPTLVIVGEVVQLRDKLAWFEGRQ

Annotated regions:
phrase: AYGQLAGLAKRFRTQVKALLPNVQQRRVFWEEVFQGPIAEQVLAGRTTKAQQLLESK
type: DOMAIN
name: Sirohaem_synthase_dimer_dom
description: Sirohaem synthase, dimerisation domain

phrase: SPLIVAVSSGGDAPVLARLIRAKI
type: DOMAIN
name: Sirohaem_synthase_central
description: Siroheme synthase, central domain

phrase: VGAGPGDPDLLTFRALRLMQQADVVLYDRLVSPAIIELCRRDAERIYVGKQRADHALPQEQINQQLVALAQQGKRVLRLKGGDPFIFGRGGEEIEELAEHGIPFQVVPGITAASGCAAYAGIPLTHRDHAQSVRFVTGHLKDGSCDLPWTELAAPRQTLVFYMGLVGLPVICAQLIRHGRAGSTPAALIQQGTTAKQRVFTGTLANLPELVARHEVHAPTLVIVGEV
type: DOMAIN
name: CobA/CysG_C
description: Uroporphyrin-III C-methyltransferase

phrase: VLRLKGGDPFIFGRGGEEIEELAEHGIPFQVVP
type: CONSERVED_SITE
name: Uropor_MeTrfase_CS
description: Uroporphiryn-III C-methyltransferase, conserved site

phrase: LPLFHNLQGRTVLVVGGGEVALRKARLLADAGAQLRVVAPEIEAQLTELVGQKGGETWVRGYRESDLAGCVLVIAATDDQPLNAQVSEDAKARGLPVNVVDAPALCTVIFPAIVDRSPLIVAVSSGGDAPVLARLIRAKIETWIPAAYGQLAGLAKRFRTQVKALLPNVQQRRVFWEEVFQGPIAEQVLAGRTTKAQQLLESK
type: DOMAIN
name: Sirohaem_synthase_N
description: Sirohaem synthase, N-terminal

phrase: GEVYLVGAGPGDPDLLTFRALRLMQQADVVLYDRLVSPAIIELCRRDAERIYVGKQRADHALPQEQINQQLVALAQQGKRVLRLKGGDPFIFGRGGEEIEELAEHGIPFQVVPGITAASGCAAYAGIPLTHRDHAQSVRFVTGHLKDGSCDLPWTELAAPRQTLVFYMGLVGLPVICAQLIRHGRAGSTPAALIQQGTTAKQRVFTGTLANLPELVARHEVHAPTLVIVGEVVQL
type: DOMAIN
name: CobA/CysG_C
description: Uroporphyrin-III C-methyltransferase

phrase: VYLVGAGPGDPDLLTFRALRLMQQADVVLYDRLVSPAIIELCRRDAERIYVGKQRADHALPQEQINQQLVALAQQGKRVLRLKGGDPFIFGRGGEEIEELAEHGIPFQVVPGITAASGCAAYAGIPLTHRDHAQSVRFVTGHLKDGSCDLPWTELAAPRQTLVFYMGLVGLPVICAQLIRHGRAGSTPAALIQQGTTAKQRVFTGTLAN
type: DOMAIN
name: 4pyrrol_Mease
description: Tetrapyrrole methylase
Protein sequence:
MISTVQDSLEGHFHVLTPIKLNLALHIVGQRTDGYHLLESLVYFSLSGDCLSYAPCERDRFILTGPFAKGLSCNSINLAVRARDFMHKTFPRSAKPSSFQLMKTLPVASGIGGGSGDAASILNILRQKWKLDCSCEELAEMSLALGADVPMCLFALEYQQPLFVKGIGNDVTRLEEACSIAMVLVNHGQKIATETIFNALEKRNHPPLKINPVALKTVSSLVEVLQETRNDLFIPALKIAPQLAEVLSTLDESGSLFSRMSGSGATCFGIFKDQQAAQKAAAFIKSMHPNWFVKSIITLGRSSQ

Annotated regions:
phrase: EVLQETRNDLFIPALKIAPQLAEVLSTLDESGSLFSRMSGSGATCFGIFKDQQAAQKAAAFIKS
type: DOMAIN
name: GHMP_kinase_C_dom
description: GHMP kinase, C-terminal domain

phrase: NLAVRARDFMHKTFPRSAKPSSFQLMKTLPVASGIGGGSGDAASILNILRQKWKLDCSCEELAEMSLALGADVPMCL
type: DOMAIN
name: GHMP_kinase_N_dom
description: GHMP kinase N-terminal domain
Protein sequence:
MKPFVVFVLGGPGAGKGTQCERIVQKYGYTHLSAGDLLRDERKKPDSQYGELIESYIRDGRIVPVEITISLLQRAMEQTMALDGNKHKFLIDGFPRNEDNLQGWERTMNGKADVSFVLFFDCDNETCIERCLERGKSSGRSDDNRESLEKRIQTYLQSTRPIIDLYEKTGKVKKVDASKSVDEVFTKVQDIFDREG

Annotated regions:
phrase: FLIDGFPRNED
type: CONSERVED_SITE
name: Adenylat_kinase_CS
description: Adenylate kinase, conserved site
Protein sequence:
MTQKLHIKTWGCQMNEYDSSKMADLLLSTHGLELTEAPEEADVLLLNTCSIREKAQEKVFHQLGRWKELKKNNPNLVIGVGGCVASQEGEHIRHRAPYVDIIFGPQTLHRLPEMINQIRGGKSSVVDVSFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKYCTFCVVPYTRGEEVSRPVDDVLFEIAQLAEQGVREVNLLGQNVNAYRGPTHDGQICSFAELLRLVASIDGIDRLRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPVQAGSDRVLTMMKRAHTALEYKSIIRKLRAVRPDIQISSDFIVGFPGETAEDFEQTMNLIAQVNFDMSFSFVYSARPGTPAADMPDDVTEDEKKQRLYVLQERINQQAAQFSRRMLGTEQRVLVEGPSKKDIMELTGRTETNRIVNFQGSPEMIGKFVDVKITDVYTNSLRGEVVRTEDEMGLRIAQSPQEVMNRTRKEDELGVGRYHG

Annotated regions:
phrase: QKLHIKTWGCQMNEYDSSKMADLLLSTHGLELTEAPEEADVLLLNTCSIREKAQEKVFHQLGRWKELKKNNPNLVIGVGGCVASQEGEHIRHRAPYVDIIFGPQTLHRLPEMINQIR
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: RRMLGTEQRVLVEGPSKKDIMELTGRTETNRIVNFQGSPEMIGKFVDVKITDVYTNSLRGEV
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: VSIMEGCNKYCTFCVVPYTR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: VSIMEGCNKYCTFCVVPYTRGEEVSRPVDDVLFEIAQLAEQGVREVNLLGQNVNAYRGPTHDGQICSFAELLRLVASIDGIDRLRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPVQAGSDRVLTMMKRAHTALEYKSIIRKLRAVRPDIQISSDFIVGFPGETAEDFEQTMNL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: RAEGPTAFVSIMEGCNKYCTFCVVPYTRGEEVSRPVDDVLFEIAQLAEQGVREVNLLGQNVNAYRGPTHDGQICSFAELLRLVASIDGIDRLRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPVQAGSDRVLTMMKRAHTALEYKSIIRKLRAVRPDIQISSDFIVGFPGETAEDFEQTMNLIAQVNFDMSFSFVYSARPGTPAADMPDDVTEDEKKQRLYVLQERINQQAA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TQKLHIKTWGCQMNEYDSSKMADLLLSTHGLELTEAPEEADVLLLNTCSIREKAQEKVFHQLGRWKELKKNNPNLVIGVGGCVASQEGEHIRHRAPYVDIIFGPQTLHRLPEMINQIRGGKSSVVDVSFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKYCTFCVVPYTRGEEVSRPVDDVLFEIAQLAEQGVREVNLLGQNVNAYRGPTHDGQICSFAELLRLVASIDGIDRLRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPVQAGSDRVLTMMKRAHTALEYKSIIRKLRAVRPDIQISSDFIVGFPGETAEDFEQTMNLIAQVNFDMSFSFVYSARPGTPAADMPDDVTEDEKKQRLYVLQERINQQAAQFSRRMLGTEQRVLVEGPSKKDIMELTGRTETNRIVNFQGSPEMIGKFVDVKITDVYTNSLRGEVVRT
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: PTAFVSIMEGCNKYCTFCVVPYTRGEEVSRPVDDVLFEIAQLAEQGVREVNLLGQNVNAYRGPTHDGQICSFAELLRLVASIDGIDRLRFTTSHPIEFTDDIIDVYRDTPELVSFLHLPVQAGSDRVLTMMKRAHTALEYKSIIRKLRAVRPDIQISSDFIVGFPGETAEDFEQTMNLIAQVNFDMSFSFVYSARPGTPAADMPDDVTEDEKKQRLYVLQ
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: RRMLGTEQRVLVEGPSKKDIMELTGRTETNRIVNFQGSPEMIGKFVDVKITDVYTNSLRGEVV
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: KLHIKTWGCQMNEYDSSKMADLLLSTHGLELTEAPEEADVLLLNTCSIREKAQEKVFHQLGRWKELKKNNPNLVIGVGGCVASQEGEHIRHRAPYVDIIF
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal
Protein sequence:
MEIRYTPKELTKLPRTVEYKNKSVYMINQRLLPKEFKVEKFSKVEEVAEAIKNMTVRGAPAIGAAAGFGLALYAETSKAKTKEEFLDGFEKAYEILKNTRPTAVNLFWALNRIKKLVEEHSEDPLDEIKRLIVQEAYKIADEDVEANLRMGHYGAEVLPEGNILTHCNAGSLATVHLGTVGSVVRVMHKDGSLKLLWLDETRPVLQGARLSAWEYSYDGLNVKLIADNAAAFVMQQGFVDAIIVGADRIVANGDFANKIGTYMLAVLAREHGIPFFAVAPLSSIDMELKSGKDIPIEERSPEEVLTCGGCRIAPDVPVYNPAFDVTPHKYLTGIITDRGVVWPPFKRNLKKLFEVNKSGGDEAV

Annotated regions:
Protein sequence:
MMKILVTGGGGFLGQALCRGLVARGHEVVSFQRGDYPVLHTLGVGQIRGDLADPQAVRHALAGIDAVFHNAAKAGAWGSYDSYHQANVVGTQNVLDACRANGVPRLIYTSTPSVTHRATNPVEGLGADEVPYGEDLRAPYAATKAIAERAVLAANDAQLATVALRPRLIWGPGDNHLLPRLAARARAGRLRMVGDGSNLVDSTYIDNAAQAHFDAFAHLAPGAACAGKAYFISNGEPLPMRELLNRLLAAVDAPAVTRSLSFKTAYRIGAVCETLWPLLRLPGEVPLTRFLVEQLCTPHWYSMEPARRDFGYVPQISIEEGLQRLRSSSSRDISITR

Annotated regions:
phrase: LVTGGGGFLGQALCRGLVARGHEVVSFQRGDYPVLHTLGVGQIRGDLADPQAVRHALAGIDAVFHNAAKAGAWGSYDSYHQANVVGTQNVLDACRANGVPRLIYTSTPSVTHRATNPVEGLGADEVPYGEDLRAPYAATKAIAERAVLAANDAQLATVALRPRLIWGPGDNHLLPRLAARARAGRLRMVGDGSNLVDSTYIDNAAQAHFDAFAHLAPGAACAGKAYFISNGEPLPMRELLNRLLAAV
type: DOMAIN
name: 3Beta_OHSteriod_DH/Estase
description: 3-beta hydroxysteroid dehydrogenase/isomerase
Protein sequence:
MRLIRTLFVAALAMGTSLAHADDSAAVQRLTGLLNKAQTLTARFSQLTLDGSGTRLQETAGQLSLKRPGLFRWHTDAPNEQLLISNGEKVWLYDPDLEQVTIQKLDQRLTQTPALLLSGDISKISESFAITYKEGGNVVDFVLKPKTKDTLFDTLRLSFRSGKVNDMQMIDGVGQRTNILFFDVKMNEALDAKQFTFDVPPGVDVIQE

Annotated regions:
Protein sequence:
MAAPVSEPTVARQKLLALLGQVQTYVFQIELLRRCDPHIGRGKLPQLKLNALQVRALRRRLRPGLEAQAGAFLTPLSVTLELLLEYAWREGERLLGSLETFATAGDVAAFFTETMGLARPCPYHQRVRLDTYGGTVHMELCFLHDVENFLKQLNYCHLITPSRGATAALERVREFMVGAVGSGLIVPPELSDPSHPCAVCFEELCVTANQGATIARRLADRICNHVTQQAQVRLDANELRRYLPHAAGLSDADRARALSVLDHALARTAGGDGQPHPSPENDSVRKEADALLEAHDVFQATTPGLYAISELRFWLASGDRAGQTTMDAFASNLTALARRELQQETAAVAVELALFGRRAEHFDRAFGSHLAALDMVDALIIGGQATSPDDQIEALIRACYDHHLTTPLLRRLVSPEQCDEEALRRVLARMGAGGAADAPKGGAGPDDDGDRVAVEEGARGLGAPGGGGEDEDRRRGPGGQGPETWGDIATQAAADVRERRRLYADRLTKRSLASLGRCVREQRGELEKMLRVSVHGEVLPATFAAVANGFAARARFCALTAGAGTVIDNRSAPGVFDAHRFMRASLLRHQVDPALLPSITHRFFELVNGPLFDHSTHSFAQPPNTALYYSVENVGLLPHLKEELARFIMGAGGSGADWAVSEFQRFYCFDGISGITPTQRAAWRYIRELIIATTLFASVYRCGELELRRPDCSRPTSEGRYRYPPGVYLTYDSDCPLVAIVESAPDGCIGPRSVVVYDRDVFSILYSVLQHLAPRLPDGGHDGPP

Annotated regions:
Protein sequence:
MMSQPAKVLLLYAHPESQDSVANRVLLKPATQLSNVTAHDLYAHYPDFFIDIPREQALLREHEVIVFQRPLYTYSCPALLKEWLDRVLSRGFASGPGGNQLAGKYWRSVITTGEPESAYRYDALNRYPMSDVLRPFELAAGMCRMHWLSPIIIYWARRQSAQELASHARAYGDWLANPLSPGGR

Annotated regions:
phrase: KVLLLYAHPESQDSVANRVLLKPATQLSNVTAHDLYAHYPDFFIDIPREQALLREHEVIVFQRPLYTYSCPALLKEWLDRVLSRGFASGPGGNQLAGKYWRSVITTGEPESAYRYDALNRYPMSDVLRPFELAAGMCRMHWLSPIIIYWARRQSAQELASHARAYGD
type: DOMAIN
name: Flavodoxin_fold
description: Flavodoxin-like fold
Protein sequence:
MKNSPIGVFDSGVGGLTVARTIVDQAPTESIMYVGDTAHAPYGPKPREDIIRYSTAIADDLVARGAKMIVIACNTAASVFLDKARELYDVPVVGVIEPASRRAVAATRNGRVGVIGTTGTIASGAYQRCIANLDPNIEVHAVDCPQFVPFVERGITTGRQIMGLAEAYLEPLQDVGVDTVVLGCTHYPLLTGVIQLVMGDNVTLVSSSEEEGKEVPRVLYQEDLFNDANPEAESLDVVDANVVNDYAGPEPVRTFESTGDPHRFARLARRFLGPSITQVSHVEGLTDM

Annotated regions:
phrase: VVLGCTHYPL
type: ACTIVE_SITE
name: Asp/Glu_racemase_AS_2
description: Asp/Glu racemase, active site 2
Protein sequence:
MKSLLDLFKQFTPDEHFNAIKIGMASPEKIRSWSFGEVKKPETINYRTFKPERDGLFCAKIFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIDLAAPCAHIWFLKSLPSRLGLVLDMTLRDIERVLYFEAYVVTDPGMTPLKKFSIMSEDDFDAKFKEYGDEFQAKMGAEGIKDLLQSLDIDGSIERLRNDPTGSELKIKKNTKRLKLLEAFKKSGIKPEWMVLEVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNSRLRRLLELKAPEIIARNEKRMLQEAVDSLLDNGRRGKAMTGANKRALKSLADMIKGKSGRFRQNLLGKRVDYSGRSVIVVGPTLKLHQCGLPKLMALELFKPFIFARLEAMGIATTIKAAKKEVESGTPVVWDILEEVIKEHPVMLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSVEAQVECRTLMLASNNVLFPSNGEPSIVPSQDVVLGLYYTTRERINGKGEGLIFADVGEVQRAFDGGAVELNSRINVRLTEYIKDKQTGELVPSTKLWETTAGRALLSEILPKGLPFENVNKALKKKEISKLINVSFRKCGLKETVVFADKLLQYGFRLATKAGISICLDDMLVPTEKPGIIEQAEQEVKEIAQQYTSGLVTSGERYNKVVDIWGKAGDEVSKVMMAQLSKEIVTDRHGQQVQQESFNSIYMMADSGARGSPAQIRQVAGMRGLMAKPDGSIIETPITANFREGLNV

Annotated regions:
phrase: HFNAIKIGMASPEKIRSWSFGEVKKPETINYRTFKPERDGLFCAKIFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIDLAAPCAHIWFLKSLPSRLGLVLDMTLRDIERVLYFEAYVVTDPGMTPLKKFSIMSEDDFDAKFKEYGDEFQAKMGAEGIKDLLQSLDIDGSIERLRNDPTGSELKIKKNTKRLKLLEAFKKSGIKPEWMVLEVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNSRLRRLLELKAPEIIARNEKRMLQEAVDSLLDNGRRGKAMTGANKRALKSLADMIKGKSGRFRQN
type: DOMAIN
name: RNA_pol_Rpb1_1
description: RNA polymerase Rpb1, domain 1

phrase: GKRVDYSGRSVIVVGPTLKLHQCGLPKLMALELFKPFIFARLEAMGIATT
type: DOMAIN
name: RNA_pol_asu
description: RNA polymerase, alpha subunit

phrase: TTIKAAKKEVESGTPVVWDILEEVIKEHPVMLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSVEAQVECRTLM
type: DOMAIN
name: RNA_pol_asu
description: RNA polymerase, alpha subunit

phrase: TSGERYNKVVDIWGKAGDEVSKVMMAQLSKEIVTDRHGQQVQQESFNSIYMMADSGARGSPAQIRQVAGMRGLMAKPDGSIIETPITANF
type: DOMAIN
name: RNA_pol_Rpb1_4
description: RNA polymerase Rpb1, domain 4

phrase: EWMVLEVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNSRLRRLLELKAPEIIARNEKRMLQEAVDSLLDNGRRGKAMTGANKRALKSLADMIKGKSGRFRQNLLGKRVDYSGRSVIVVGPTLKLHQCGLPKLMALELFKPFIFARLEAMGIATTIKAAKKEVESGTPVVWDILEEVIKEHPVMLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSVEAQVECRTLMLASNNVLFPSNGEPSIVPSQDVVLGLYYT
type: DOMAIN
name: RNA_pol_N
description: RNA polymerase, N-terminal

phrase: NVLFPSNGEPSIVPSQDVVLGLYYTTRERINGKGEGLIFADVGEVQRAFDGGAVELNSRINVRLTEYIKDKQTGELVPSTKLWETTAGRALLSEILPKGLPFENVNKALKKKEISKLINVSFRKCGLKETVVFADKLLQYGFRLATKAGISICLDD
type: DOMAIN
name: RNA_pol_Rpb1_3
description: RNA polymerase Rpb1, domain 3
Protein sequence:
MLRRLDLTSSAPADLRRVLPRAKVDVAAAMSVVEPLVNAVSEHGYSAARDATRRFDGVDVPVPLVARTALRSAAEQLDPQVRDALVESIRRAKIGHNAQRREDVTTQVVPGGTVTERWIAVGRVGLYVPGGLAVYPSSVVMNVVPAQVAGVGSIAVFSPAQKEFGGLPHPTILAACALLGIEEVYAIGGAQAIAVAAYGDSELGIEPVDLVTGPGNIYVAAAKRLLRGVIGIDAEAGPTEIAILADATADPVHVAADLISQAEHDPLAASVLVTDSVHLADLVDAELSRQVGLTKHTDRITAALQGEQSATVVVRDLEQGLAVVDAYAAEHLEVITRDARHWAERVRNAGCIFVGPDAPVSLGDYCAGSNHVLPTGCTARHASGLSVQSFLKGVHLVEYSHEALVAAAPYVLALSNAEDLPAHGAAVSARLTESDSTSPAPVLPSDYDVPLRPELRGETPYGAPQLDVALQLNVNENPYPPSARVAAEMADAVRELAGELNRYPDRDAVALREDLATYLGHGLRGTQVWAANGSNEVMVQLLLAFGGPGRTALSFTPTYSMYPEYARDTHTRWVVGQRAEDFTIELDAALALIAREEPSVILLASPNNPTGTALPLQRIEAICGAALAVGGIVVVDEAYGEFRRAGTPSALELLPRYPNLVVTRTMSKAFALAGGRLGYLAARAEIVDAVRIVRLPYHLSAVSQAVARVALANSAELLARVDELRDTRDETAHWLRSMGLQVADSDANFVLFGGFTPDRHDVWQQLVD

Annotated regions:
phrase: IDAEAGPTEIAILADATADPVHVAADLISQAE
type: CONSERVED_SITE
name: Histidinol_DH_CS
description: Histidinol dehydrogenase, conserved site

phrase: TMSKAFALA
type: BINDING_SITE
name: Aminotrans_II_pyridoxalP_BS
description: Aminotransferase, class-II, pyridoxal-phosphate binding site

phrase: LQLNVNENPYPPSARVAAEMADAVRELAGELNRYPDRDAVALREDLATYLGHGLRGTQVWAANGSNEVMVQLLLAFGGPGRTALSFTPTYSMYPEYARDTHTRWVVGQRAEDFTIELDAALALIAREEPSVILLASPNNPTGTALPLQRIEAICGAALAVGGIVVVDEAYGEFRRAGTPSALELLPRYPNLVVTRTMSKAFALAGGRLGYLAARAEIVDAVRIVRLPYHLSAVSQAVARVALANSAELLARVDELRDTRDETAHWLRSMGLQVADSDANFVLFGGFTPDRHDVWQQLV
type: DOMAIN
name: Aminotransferase_I/II_large
description: Aminotransferase, class I/classII, large domain
Protein sequence:
MSYFEAFILALIQGLTEFLPISSSAHLILPSAIFGWADQGLAFDVAVHVGTLMAVVIYFRHEVITLFRALFASIFKGDRSKEAKLAWMIVIATIPACVFGLLMKDVIEVYLRSAYVIATTTIVFGLLLWWVDKNAKLVADEYQTGWKKAVFIGIAQALAMIPGTSRSGATITAALYLGFTREAAARFSFLMSIPIITLAGSYLGMKLVTSGEPVHVGFLLTGILTSFISAYICIHFFLKMISRMGMTPFVIYRLILGVGLFAFLLSA

Annotated regions:
Protein sequence:
MSKFIFVTGGVVSGLGKGITAASLGRLLKQRGLKVTAQKLDPYMNVDPGTMSPYQHGEVFVTEDGAETDLDLGHYERFIDEDLTKYSNLTSGKIYYEVLNKERSGGYLGQTVQVIPHITNVIKEFIYSSAEKNNCDVLITEIGGTTGDIEIQPFLETTRQIALEVGRKNCIFIHLTLVPFIKSSGEHKSKPTQHSVKELRSIGISPDIIVARADEEIPIDILEKISLFCNVRKDCVIENITLDSLYEAPLMLHNRGLDRVVCRALHLVTPEPDLTEWKKLVENIYSASKDVNVGVVGKYVKLHDAYLSVSESLRHAGYNLGVNVNIKWIDSEEITPNTNLLDDLDAMVIPGGFGDRGIEGKILACKYARENQVPLLGICLGMQVVVIEFARNVLHLDDAHSLEFAKDTSNAVIHIMEEQKDITDKGGTMRLGSYTCNIKEHSKLHQLYAKNIINERHRHRYEFNNQYRNLVQQHGLIISGTSPDNNLVEAVELTNHPYYVAVQFHPEFKSRPNKPHPLFLGLIKAIV

Annotated regions:
phrase: VNVGVVGKYVKLHDAYLSVSESLRHAGYNLGVNVNIKWIDSEEITPNTNLLDDLDAMVIPGGFGDRGIEGKILACKYARENQVPLLGICLGMQVVVIEFARNVLHLDDAHSLEFAKDTSNAVIHIMEEQKDITDKGGTMRLGSYTCNIKEHSKLHQLYAKNIINERHRHRYEFNNQYRNLVQQHGLIISGTSPDNNLVEAVELTNHPYYVAVQFHPEFKSRPNKPHPLFLGL
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain

phrase: LHDAYLSVSESLRHAGYNLGVNVNIKWIDSEEITPNTNLLDDLDAMVIPGGFGDRGIEGKILACKYARENQVPLLGICLGMQVVVIEFARNVLHLDDAHSLEFAKDTSNAVIHIMEEQKDITDKGGTMRLGSYTCNIKEHSKLHQLYAKNIINERHRHRYEFNNQYRNLVQQHGLIISGTSPDNNLVEAVELTNHPYYVAVQFHPEFKSRPNKPHPLFLGLI
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: KFIFVTGGVVSGLGKGITAASLGRLLKQRGLKVTAQKLDPYMNVDPGTMSPYQHGEVFVTEDGAETDLDLGHYERFIDEDLTKYSNLTSGKIYYEVLNKERSGGYLGQTVQVIPHITNVIKEFIYSSAEKNNCDVLITEIGGTTGDIEIQPFLETTRQIALEVGRKNCIFIHLTLVPFIKSSGEHKSKPTQHSVKELRSIGISPDIIVARADEEIPIDILEKISLFCNVRKDCVIENITLDSLYEAPLMLHNRGLDRVVC
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: KFIFVTGGVVSGLGKGITAASLGRLLKQRGLKVTAQKLDPYMNVDPGTMSPYQHGEVFVTEDGAETDLDLGHYERFIDEDLTKYSNLTSGKIYYEVLNKERSGGYLGQTVQVIPHITNVIKEFIYSSAEKNNCDVLITEIGGTTGDIEIQPFLETTRQIALEVGRKNCIFIHLTLVPFIKSSGEHKSKPTQHSVKELRSIGISPDIIVARADEEIPIDILEKISLFCNVRKDCVIENITLDSLYEAPLMLHNRGLDRVVCRALH
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal
Protein sequence:
MTRKIVLATGNAGKVREMASLLADAGMDVVAQTELGVGSVEETGLTFVENAIIKARHAAKVTGLPAIADDSGISVDYLGGAPGIYSARYAGTDGNDGANIVKLLAALDGVPAAQRQAHFNCVLVYMRHENDPTPIICHGRWAGVIAEQAQGDGGFGYDPVFWLPELNKTAAQLRPEEKQAMSHRGKALALLSEALCNG

Annotated regions: