nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MGGGSQVEGERALVQVLVRDNNVDQALKALKKKMQREGVFREMKLRRNFEKPSEKRAREKAEAVRRARKLERKRLEREGF

Annotated regions:
phrase: DQALKALKKKMQ
type: CONSERVED_SITE
name: Ribosomal_bS21_CS
description: Small ribosomal subunit protein bS21, conserved site
Protein sequence:
MNNFGEDFIFGGATAAYQAEGATKEDGKGPCIWDEYLKKEGRFTGDTASDFYHKYKEDLKFSRKFGVNGIRISIAWSRVIPDGKGEVNPKGLKFYSDLIDECIKNNVEPFVTLHHFDTPLTLFKDGDWLNRNNIDYFVRFAKVCFEALGDRVKKWITFNEAWAVAQNGYIIGNFPPSIKYDIPKAAQSMHNMMVAHAKVVELYKSMNLDGEIGIVHTLEGKYPITDSKEDKEAAYLDYMISNKFMLDACFKGEYPKETEKTINEIMSKNGGELKIYDGDLEVLKKASSKIDFLGMNYYSSHFLKAYEGESRIHHNGTGEKGTSIFALKGIGERVNNPEVPTTDWDWPIYPKGLHDMLVRIKNEYPNYKKIYVTENGMGYKDDFKDGKIDDTPRIDYINKHLEAILKAKNEGVVVKGYFVWSLMDVLSWSNGYNKRYGLFYVDFKTQNRYAKKSAYWFKRISYEKKLIDFSDIEY

Annotated regions:
phrase: IYVTENGM
type: ACTIVE_SITE
name: Glyco_hydro_1_AS
description: Glycoside hydrolase family 1, active site

phrase: FIFGGATAAYQAEG
type: CONSERVED_SITE
name: Glyco_hydro_1_N_CS
description: Glycosyl hydrolases family 1, N-terminal conserved site
Protein sequence:
MYREKFTKITEGFTFDDVLLIPMRTAVEPKNVVVSSRISRHIQVKVPIVSSPMDTVTEDAMAIAMARYGAIGVIHRNQPREKEVEMVKRVKREETIIIRDVYTISPETPIEVARTLMATRNIAGLPVVKDDKLVGIVTKRDLEFVKKGSSVSDVMVRDVITAPENVDIDEAIEILHKNRIEKLPLVDSSGHLVGLITAKDIITRQKFPDASRDSEGQLMVGAAVGPFDLDRAVEVEKAGADFIVVDTAHADNENVLSSLKKMRKQISVDIVAGNIATAQAAEDLISCDVDGLRVGIGPGSICTTRIVAGVGVPQLTAISDVAEAAKDSGIPVIADGGIRYSGDIVKAIAAGADAVMLGSMLAGTEESPGQEMIINGRKYKAYRGMGSIGALTTGLSDRYSKLGNGFIAEGVEGAVPYRGRVDEVLFQLVGGLRTGMGYVGAATIEDLKRNGKFVRITNNGLRESHPHDIRLISEPPNYQISNISP

Annotated regions:
phrase: DVITAPENVDIDEAIEILHKNRIEKLPLVDSSGHLVGLITAKDIITRQ
type: DOMAIN
name: CBS_dom
description: CBS domain

phrase: DVYTISPETPIEVARTLMATRNIAGLPVVKDDKLVGIVTKRDLEFVK
type: DOMAIN
name: CBS_dom
description: CBS domain

phrase: IIRDVYTISPETPIEVARTLMATRNIAGLPVVKDDKLVGIVTKRDLEFVKKGSSVSD
type: DOMAIN
name: CBS_dom
description: CBS domain

phrase: GFTFDDVLLIPMRTAVEPKNVVVSSRISRHIQVKVPIVSSPMDTVTEDAMAIAMARYGAIGVIHRNQPREKEVEMVKRVKREETIIIRDVYTISPETPIEVARTLMATRNIAGLPVVKDDKLVGIVTKRDLEFVKKGSSVSDVMVRDVITAPENVDIDEAIEILHKNRIEKLPLVDSSGHLVGLITAKDIITRQKFPDASRDSEGQLMVGAAVGPFDLDRAVEVEKAGADFIVVDTAHADNENVLSSLKKMRKQISVDIVAGNIATAQAAEDLISCDVDGLRVGIGPGSICTTRIVAGVGVPQLTAISDVAEAAKDSGIPVIADGGIRYSGDIVKAIAAGADAVMLGSMLAGTEESPGQEMIINGRKYKAYRGMGSIGALTTGLSDRYSKLGNGFIAEGVEGAVPYRGRVDEVLFQLVGGLRTGMGYVGAATIEDLKRNGKFVR
type: DOMAIN
name: IMP_DH_GMPRt
description: IMP dehydrogenase/GMP reductase

phrase: LRVGIGPGSICT
type: CONSERVED_SITE
name: IMP_DH/GMP_Rdtase_CS
description: IMP dehydrogenase / GMP reductase, conserved site

phrase: GFTFDDVLLIPMRTAVEPKNVVVSSRISRHIQVKVPIVSSPMDTVTEDAMAIAMARYGAIGVIHRNQPREKEVEMVKRVKREETIIIRDVYTISPETPIEVARTLMATRNIAGLPVVKDDKLVGIVTKRDLEFVKKGSSVSDVMVRDVITAPENVDIDEAIEILHKNRIEKLPLVDSSGHLVGLITAKDIITRQKFPDASRDSEGQLMVGAAVGPFDLDRAVEVEKAGADFIVVDTAHADNENVLSSLKKMRKQISVDIVAGNIATAQAAEDLISCDVDGLRVGIGPGSICTTRIVAGVGVPQLTAISDVAEAAKDSGIPVIADGGIRYSGDIVKAIAAGADAVMLGSMLAGTEESPGQEMIINGRKYKAYRGMGSIGALTTGLSDRYSKLGNGFIAEGVEGAVPYRGRVDEVLFQLVGGLRTGMGYVGAATIEDLKRNGKFVRITNNGLRESHP
type: DOMAIN
name: IMP_DH_GMPRt
description: IMP dehydrogenase/GMP reductase

phrase: MVRDVITAPENVDIDEAIEILHKNRIEKLPLVDSSGHLVGLITAKDIITRQKFPDA
type: DOMAIN
name: CBS_dom
description: CBS domain

phrase: IIIRDVYTISPETPIEVARTLMATRNIAGLPVVKDDKLVGIVTKRD
type: DOMAIN
name: CBS_dom
description: CBS domain

phrase: VSDVMVRDVITAPENVDIDEAIEILHKNRIEKLPLVDSSGHLVGLITAKDII
type: DOMAIN
name: CBS_dom
description: CBS domain
Protein sequence:
MNEIIGLDITQLETLIVDIGESKFRAKQLFSWFHEKLVWDYDDMTNISIPLRTKLKETYPIQKLNIEQKYKSDIDGTTKYLFELPDGNIIESVLMRYKHGNSVCISTQVGCRMGCMFCASTINGLVRDLTVAELLGQVYSIINDIGERVSNVVLMGSGEPFEMLDTVVKFVELINNDKGQNIGQRHITVSTCGIVPEIINLADKNLQITLAISLHAPTDDKRKEIMPIANKYTIEQLLDACKYYTTKTNRRITFEYALILGKNDTKDEATQLANLLKGLLCHVNLIPVNPVAEREFESTSESGVQDFQSVLKSYNIETTIRRKLGEDIEAACGQLRNRYIKNRGDI

Annotated regions:
phrase: YKHGNSVCISTQVGCRMGCMFCASTINGLVRDLTVAELLGQVYSIINDIGERVSNVVLMGSGEPFEMLDTVVKFVELINNDKGQNIGQRHITVSTCGIVPEIINLADKNLQITLAISLHAPTDDKRKEIMPIANKYTIEQLLDACKYYTTKTNRRITFEYALILGKNDTKDEATQLANLLKGLLCHVNLIPVNPVAEREFESTSESGVQDFQSVLKSYNIETTIRRKLGE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: NEIIGLDITQLETLIVDIGESKFRAKQLFSWFHEKLVWDYDDMTNISIPLRTKLKETYPIQKLNIEQKYKSDIDGTTKYLFELPDGNIIESVLMRYKHGNSVCISTQVGCRMGCMFCASTINGLVRDLTVAELLGQVYSIINDIGERVSNVVLMGSGEPFEMLDTVVKFVELINNDKGQNIGQRHITVSTCGIVPEIINLADKNLQITLAISLHAPTDDKRKEIMPIANKYTIEQLLDACKYYTTKTNRRITFEYALILGKNDTKDEATQLANLLKGLLCHVNLIPVNPVAEREFESTSESGVQDFQSVLKSYNIETTIRRKLGEDIEAACGQLRNRYIK
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: IIGLDITQLETLIVDIGESKFRAKQLFSWFHEKLVWDYDDMTNISIPLRTKLKET
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: ISTQVGCRMGCMFCASTINGLVRDLTVAELLGQVYSIINDIGERVSNVVLMGSGEPFEMLDTVVKFVELINNDKGQNIGQRHITVSTCGIVPEIINLADKNLQITLAISLHAPTDDKRKEIMPIANKYTIEQLLDACKYYTTKTNRRITFEYALILGKNDT
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MINDIINDSKSRMEKSLGSLKTELAKLRTCRAHPSLLEHIKVDYYNVETPLSQVASIAIENPRTLSITPWEKNMVGPIEKAIQKADLGLNPATVGMVIRVPLPPLTEERRKELARVVREEAEHARVAIRNIRREANNDLKELMKEKEISEDEERRAQTAIQKLTDAQIAEVDKMASQKEADLMAV

Annotated regions:
phrase: LKTELAKLRTCRAHPSLLEHIKVDYYNVETPLSQVASIAIENPRTLSITPWEKNMVGPIEKAIQKADLGLNPATVGMVIRVPLPPLTEERRKELARVVREEAEHARVAIRNIRREANNDLKELMKEKEISEDEERRAQTAIQKLTDAQIAEVDKMASQKEADL
type: DOMAIN
name: Ribosome_recyc_fac_dom
description: Ribosome recycling factor domain
Protein sequence:
MKLVIATNNQGKVREIKEMLEPLGYEPVSLKDAGISIEVVEDGETFAENAHKKAKAVYDICRCPVIADDSGLEVDFLGGAPGIYSARYAGEDATDEQRIQKILDELDGVDESMRTARFVCSIYCIIDDDTEYSVRGTLEGHIGTEPLGSNGFGYDPIFMVDEDTSVAMLPAEEKNRISHRASAIKQLTEILAGQDK

Annotated regions:
Protein sequence:
MSFTPKNLNVKYTFNVSRNRSKVWLISGFAVLISFLGFFFSWTNQSIGFPLRPGFDFTGGTQIILERKCDSECNKITTINISEAFNNAKFSNQETSQKLFDARIQFLDGYKSLLIRSPELSPSESKEVIESIEFVAGPLEDGGQSVESIGPTLGAKLLQTTLISLLVAFSCVAIYISIRFDRMFSLYALLALFHDVLIVCGVFSWLGIINEVEVNSLFAVALLTIAGYSVNDTVVVFDRIREINKQESRMNFKQKVDFAVSATLTRTLYTSGTTLLPLIALIFFGGTTLYWFAIALALGVVVGSWSSIALVPSLLTLRKEN

Annotated regions:
phrase: QSVESIGPTLGAKLLQTTLISLLVAFSCVAIYISIRFDRMFSLYALLALFHDVLIVCGVFSWLGIINEVEVNSLFAVALLTIAGYSVNDTVVVFDRIREINKQESRMNFKQKVDFAVSATLTRTLYTSGTTLLPLIALIFFGGTTLYWFAIALALGVVVGSWSSIALVPSLL
type: DOMAIN
name: SecD_SecF_C
description: Protein export membrane protein SecD/SecF, C-terminal
Protein sequence:
MLEKFSSKFNVLKHSTTNGLLSVQINPNDIYEAVLFVRDNIGFEILADIVCVDNLYIDKEKRFSLYYIFRKISSENLCIYIDIDINQSVKSVESIYKSANWGERECFDQFGVKFENHPNLKRILNHKDFQGYPLRKDYPITKYQVLYESDDLVGEMKNEMQRAGLASEENDEFKTKYTFLNIGPSHPATHGTIRNFVALDGEKIISCVTEIGYLHRGFEKACENHSYAQIIPYTDRLNYCSAMLNNVGYAKAVEEALGLNLPDRGIFMRVILGELARIIDHEVCLGAMFVDMGGLTNYWYLYNPRERIYNFLSKLTGARFTNSFARIGGMANDFYDGWKEELLAHLKDVEKGVDDTMILIEKNRIFLDRVQNICKINANDALSYGFSGPNLRASGVSFDLRKDKPYYYYDSFDFSVPVGSEGDIYDRMFVRFFEMRESISIIRQAIKLIPEGKISVDDKDVFLPSKDQVYSNIESLINHFKLIFDGIKLPNGHFYSASEGANGELGFFIFSNSEPNPYRVKLRPPCFYALNAFSSMVQGSLIADSILNLGSLNIIAGELDR

Annotated regions:
phrase: VQINPNDIYEAVLFVRDNIGFEILADIVCVDNLYIDKEKRFSLYYIFRKISSENLCIYIDIDINQSVKSVESIYKSANWGERECFDQFGVKFENHPNLKRILNHKDFQGYPLRKDYPITKY
type: DOMAIN
name: NADH_UbQ_OxRdtase_30kDa_su
description: NADH:ubiquinone oxidoreductase, 30kDa subunit

phrase: DMGGLTNYWYLYNPRERIYNFLSKLTGARFTNSFARIGGMANDFYDGWKEELLAHLKDVEKGVDDTMILIEKNRIFLDRVQNICKINANDALSYGFSGPNLRASGVSFDLRKDKPYYYYDSFDFSVPVGSEGDIYDRMFVRFFEMRESISIIRQAIKLIPEGKISVDDKDVFLPSKDQVYSNIESLINHFKLIFDGIKLPNGHFYSASEGANGELGFFIFSNSEPNPYRVKLRPPCFYALNAFSSMVQGSLIADSILNLGSLNIIAGELD
type: DOMAIN
name: NADH_Q_OxRdtase_suD
description: NADH-quinone oxidoreductase, subunit D
Protein sequence:
EIGSTIPNATFAYVPYSPELEDHKVCGMPTSFQSHERWKGKKVVIVAVPGAFTPTCTANHVPPYVEKIQELKSKGVDEVVVISANDPFVLSAWGITEHAKDNLTFAQDVNCEFSKHFNATLDLSSKGMGLRTARYALIANDLKVEYFGIDEGEPKQSSAATVLSKL

Annotated regions:
phrase: GSTIPNATFAYVPYSPELEDHKVCGMPTSFQSHERWKGKKVVIVAVPGAFTPTCTANHVPPYVEKIQELKSKGVDEVVVISANDPFVLSAWGITEHAKDNLTFAQDVNCEFSKHFNATLDLSSKGMGLRTARYALIANDLKVEYFGIDEGEPKQSSAATV
type: DOMAIN
name: Redoxin
description: Redoxin

phrase: EIGSTIPNATFAYVPYSPELEDHKVCGMPTSFQSHERWKGKKVVIVAVPGAFTPTCTANHVPPYVEKIQELKSKGVDEVVVISANDPFVLSAWGITEHAKDNLTFAQDVNCEFSKHFNATLDLSSKGMGLRTARYALIANDLKVEYFGIDEGEPKQSSAATVLSK
type: DOMAIN
name: Thioredoxin_domain
description: Thioredoxin domain
Protein sequence:
MESKMILKDGCQELGFHIDDNQVQQLLTYKDILLEWNEKMNLTAITEEEEVMVKHFLDSLSCIQSQYLKEEGTMIDVGTGAGFPGIPLKVYFPKLKLTLLDSLNKRVEFLKEVSQELGLEDVNFVHGRAEECGQEETHREQYDYAVARAVASLNVLVEYCLPFVKVGGYFICQKGPQLKEEIQNSQNAITVLGGKVVEQKEITLPFSDITHSLLVIEKIKQTPTKYPRKPGTPSKKPIK

Annotated regions:
Protein sequence:
MASRQPEVPALEASGPLGKMSLPIGIYRRALSYDDTLEDPAPMTPPPSDMGSVPWKPVIPERKYQHLAKVEEGEASLPSPAMTLSSAIDSVDKVPVVKAKATHVIMNSLITKQTQESIQHFERQAGLRDAGYTPHKGLTTEETKYLRVAEALHKLKLQSGEITKEERQPASAQSTPSTTPHSSPKQRSRGWFTSGSSTALPGPNPSTMDSGSGDKDRNLSDKWSLFGPRSLQKYDSGSSTTQAYRGVQKPSPLELIRAQANRMAEDPAALKPPKMDIPVMEGKKQPPRAHNLKPRDLNVLTPTGF

Annotated regions:
Protein sequence:
MTLKIAIAGAGGRMGRQLIQAVHSAEGVELGAAFERKGSSLVGTDAGELAGIGHLGVAVSDDLESQKDKFDLLIDFTRPEGSLEHIAFCVANNKKMVIGTTGFDQNGKAAIKAASDKIAIVFASNFSVGVNLVFKLLEKAAKVMGDYCDIEVIEAHHRHKVDAPSGTALSMGEHIAKTLGRDLKTHGVFCREGITGERKRDEIGFSTIRASDVVGEHMVWFADIGERVEISHKASSRMTFANGAVRAGKWLENKANGLFDMTDVLDLNNL

Annotated regions:
phrase: KIAIAGAGGRMGRQLIQAVHSAEGVELGAAFERKGSSLVGTDAGELAGIGHLGVAVSDDLESQKDKFDLLIDFTRPEGSLEHIAFCVANNKKMVIGTTGFDQNGKAAIKAASDKIAIVFASN
type: DOMAIN
name: DapB_N
description: Dihydrodipicolinate reductase, N-terminal

phrase: EVIEAHHRHKVDAPSGT
type: CONSERVED_SITE
name: DapB_N_CS
description: Dihydrodipicolinate reductase, conserved site

phrase: GVNLVFKLLEKAAKVMGDYCDIEVIEAHHRHKVDAPSGTALSMGEHIAKTLGRDLKTHGVFCREGITGERKRDEIGFSTIRASDVVGEHMVWFADIGERVEISHKASSRMTFANGAVRAGKWLENKANGLFDMTDV
type: DOMAIN
name: DapB_C
description: Dihydrodipicolinate reductase, C-terminal
Protein sequence:
MHTPENRPALTPGLTLVRLPHGEGLDLPAYETAGAAGMDLRAALPADEPMTIRPGERALVPTGFIFEIPAGHEGQIRPRSGLAFKHGITCLNTPGTVDSDYRGEVKVLLVNLGAEDFAVERGMRIAQMVIAPVTRLAIREAGGATTTARGAGGFGSTGTK

Annotated regions:
phrase: DLPAYETAGAAGMDLRAALPADEPMTIRPGERALVPTGFIFEIPAGHEGQIRPRSGLAFKHGITCLNTPGTVDSDYRGEVKVLLVNLGAEDFAVERGMRIAQMVIAPVTRLAIREAGGATTTARGAGGFGST
type: DOMAIN
name: dUTPase-like
description: dUTPase-like

phrase: AGMDLRAALPADEPMTIRPGERALVPTGFIFEIPAGHEGQIRPRSGLAFKHGITCLNTPGTVDSDYRGEVKVLLVNLGAEDFAVERGMRIAQMV
type: DOMAIN
name: dUTPase_trimeric
description: dUTPase, trimeric
Protein sequence:
MMLSRPKPGESEVDLLRFQSQFLEAGAAPAVQLVKGSRRHGDAPPDRLPPQDHRDVVMLDNLPDLPPALLPAPAKRARPSPGHPLPHDEDPEERLNRHDQHITAVLSKIVERDTSSVTVTLPVPSGVAFPPVFHRSQERQVKPAASGKRSIFAQEIAARRVSGNRVTSAEQVVPSLDTPEGAVPCETPSFRDRSNQLPGRSHGFHRPNLVTGKGLRSKVAEQEVQTIHEENVARLQAMDPEEILKEQQQLLAQLDPSLVAFLRSHSQVQEQTGTKATKKQSPKRPSVLVTKEEPVTSTRTREPRTGDKLEEKPEATVEDKMEDKLQPRTPALKLPMTPSKDWLHMDTVELDKLHWTQDLPPLRRQQTQERMQARFSLQGELLAPDVDLPTHLGLHHHGEEAERAGYSLQELFHLTRSQVSQQRALALQVLSQIVGRAQAGEFGDRLVGSVLRLLLDAGFLFLLRFSLDDRVDSVIAAAVRALRTLLVAPGDEELLDRTFSWYHGASVFPLMPSQDDKEDEDEDEELETEKVKRKTPEEGSRPPPDLARHDVIKGLLATNLLPRLRYVLEVTCPGPSVILDILAVLIRLARHSLESAMRVLECPRLMETIVQEFLPTSWSPIGVGPTPSLYKVPCASAMKLLRVLASAGRNIAARLLSGFDVRSRLCRFIAEAPHDLALPPEEAEILTTEAFRLWAVAASYGQGGDLYRELYPVLLRALQTLPTELSAHPLQPLAMQRVAALFTLLTQLTLAASSIPPEPASGPAESCVPAIPSSVTWTQVSGLKPLVEPCLKQTLKFLPRPDVWNALGPVPSACLLFLGAYYQAWSRQSHLCPEDWLQDMERLLDESLLPLLSQPPLGSLWDSLRDCSPLCNPLSCASNPEALPSLVSLGCAGGCPPLSVAGSASPFPFLTALLSLINTLVQSHKGLCGQLSAVLTAPGLQNYFLQCVAPAPAPQLTPFSAWALHHEYHLQYLVLSFAHKAATLQPEPAASTALHHAVALVLLSRLLPGSEYLAQELLLSCVFRLEFLPESASGGPEAADFSDGLSLGSSGDPQCRRGALLVQACRDLPSIRSCYLAHCSPARASLLSSQALYCGELLRVSSLLLPVPKEPLLATDWPFQPLIHLYHRASDTPSGPPAADTVGVAMRVLQWVLVLESWRPEVLWAVPPAARLARLMCVYLVDSELFRETPIQRLVAALLARLCRPQVLPNLKLDCPLPGLTSFPDLYASFLDHFEAVSFGDHLFGALVLLPLQRRFSVTLRLALFGEHVGVLRALGLPLTQLPVPLECYTEPAEDSLPLLQLYFRALVTGTLRARWCPILYTVAVAHVNSFIFCQDPKSSDEVKTARRSMLQRTWLLTDEGLRQHLLHYKLPNSSLPEGFELYSQLPRLRQQCLQTLPTEGLQNGGVKT

Annotated regions:
phrase: QTIHEENVARLQAMDPEEILKEQQQLLAQLDPSLVAFLRSHS
type: DOMAIN
name: RNA_pol_II_AP1_N
description: RNA polymerase II-associated protein 1, N-terminal

phrase: QARFSLQGELLAPDVDLPTHLGLHHHGEEAERAGYSLQELFHLTRSQVSQQRALALQVLSQIVGR
type: DOMAIN
name: RNA_pol_II_AP1_C
description: RNA polymerase II-associated protein 1, C-terminal
Protein sequence:
MSIFLCFLLLLPLSLIFLKKLLPSKGKLPPGPKGLPIIGNLHQFGRFLHKSLHKISQEYGPVMLLHFGVVPVIIVSSKEGAEEVLKTHDLETCSRPKTVGSGLFTYNFKDIGFAPYGENWREMRKIAVSELFSQKKLKSFRYIREDESQLLVRKVSKSALETPTSSVNLRKVIFTFAASIICRLSFGQNFCDFVDMETVEELVLESETNLGSLAFADFLPAGWIIDRISGQHSTVMKAFSKLTNFFELVIDDHLKSGKIEDHSDIISVMLDMINKPTEVGSYKVTDDHLKGLMSDVFLAGVNAGSITMIWTMTELSRHPRVMRKLQEEIRAALGPNKEKITEEDLEKVEYLKMVIEEAFRLHPPAPLLLPRLTMSDINIQGYSIPKNTMIQINTYTIGRDPKNWTKPDEFIPERFVDNPIEYKGQHFELLPFGAGRRVCPGMATGITIVELGLLSLLYFFDWSLPNGMTTKDIDMEEDGAFVIAKKVSLELVPTLHRW

Annotated regions:
phrase: FGAGRRVCP
type: CONSERVED_SITE
name: Cyt_P450_CS
description: Cytochrome P450, conserved site
Protein sequence:
MLRNRNEGMSTIPEFSQIQFEGFCRFIDWGLAEELHKFPKIEDTDQEIEFQLFVETYQLAEPLIKERDAVYESLTYSSELYVPAGLIWKPGKDMQEQTVFIGNIPLMSSLGIFIVNGIYRIVINQILQSPGIYYRSELDHNGIFIYTGTIISDWGGRSELEIDRKARIWARVSRKQKISILVSSSAMGSNLREILENVRYPEIFLSFLNERDKKKIGSRENAILEFYQQFACVGGDPVFSESLCRELQKKFFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDVLAAADHLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENVVRGTICGAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKSSYLGPGGLTGRTASFRIRDIHTSHYGRICPIDTSEGINVGLIGSLAIHARVGPWGSIKTPFYEISERSKRLQLVYLSPSVDEYHMVAAGNSLALNRGIQEEQAVPARYRQEFLTIAWEQIHLRSIFPFQYFSMGASLIPFIEHNDANRALMSSNMQRQAVPLSRSEKCIVGTGLERQAALDSGVSAISEREGKVIYTNTDKIILSGNGDTITIPLVMYQRSNKNTCMHQKTQVSRGKCIKKGQILANGAATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLETHLLRNLDRNGIVMLGSWVETGDILVGKLTPQTAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPETIRVYISQKREMKVGDKVAGRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDFLGRHYRVAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPFDQPVLIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRSRQEVLGTTIVGGTIANPGDAPESFRLLVRELRSLALELNHFLLSEKDFQIHRKEA

Annotated regions:
phrase: QSPGIYYRSELDHNGIFIYTGTIISDWGGRSELEIDRKARIWARVSRKQKISILVSSSAMGSNLREILENVRYPEIFLSFLNERDKKKIGSRENAILEFYQQFACVGGDPVFSESLCRELQKKFFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDVLAAADHLIGMKFGMGTLDDMNHLKNKRI
type: DOMAIN
name: RNA_pol_Rpb2_2
description: RNA polymerase Rpb2, domain 2

phrase: QIQFEGFCRFIDWGLAEELHKFPKIEDTDQEIEFQLFVETYQLAEPLIKERDAVYESLTYSSELYVPAGLIWKPGKDMQEQTVFIGNIPLMSSLGIFIVNGIYRIVINQILQSPGIYYRSELDHNGIFIYTGTIISDWGGRSELEIDRKARIWARVSRKQKISILVSSSAMGSNLREILENVRYPEIFLSFLNERDKKKIGSRENAILEFYQQFACVGGDPVFSESLCRELQKKFFQQRCELGRIGRRNMNRRLNLDIPQNNTFLLPRDVLAAADHLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENVVRGTICGAIRHKLIPTPQNLVT
type: DOMAIN
name: RNA_pol_bsu_protrusion
description: RNA polymerase, beta subunit, protrusion

phrase: SEREGKVIYTNTDKIILSGNGDTITIPLVMYQRSNKNTCMHQKTQVSRGKCIKKGQILANGAATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTHVTSQGPERITKEIPHLETHLLRNLDRNGIVMLGSWVETGDILVGKLTPQTAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIGGRGRVIDVRWIQKKGGSSYNPETIRVYISQKREMKVGDKVAGRHGNKGIISKILPRQDMPYLQDGTPVDMVFNPLGVPSRMNVGQIFECSLGLAGDFLGRHYRVAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPFDQPVLIGKSYILKLIHQVDDKIHGRSSGHYALVTQQPLRGRA
type: DOMAIN
name: DNA-dir_RNAP_su2_dom
description: DNA-directed RNA polymerase, subunit 2, hybrid-binding domain

phrase: GDKVAGRHGNKG
type: CONSERVED_SITE
name: RNA_pol_bsu_CS
description: RNA polymerase, beta subunit, conserved site

phrase: QVLDRTNPLTQIVHGRKSSYLGPGGLTGRTASFRIRDIHTSHYGRICPIDTSEGINVGLIGSLAIHAR
type: DOMAIN
name: RNA_pol_Rpb2_3
description: RNA polymerase Rpb2, domain 3

phrase: GGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIRSRQEVLGTTIVGGTIANPGDAPESFRLLVRELRSLALELNH
type: DOMAIN
name: RNA_pol_Rpb2_7
description: RNA polymerase Rpb2, domain 7
Protein sequence:
MALGKKRIVTQKPNLRQRRDVDNGGLGLGLEFVQYKRGFGRKRILISSGDEMEDSIFTSPVGKKLCDDKTTSVAEGQSRELEDLPLDILVRIICGVEHEDLKQLFHVSKTIREATMIAKQSHFAYSTPRKTSVFHHGRFGWDKPFDVEDDDEEIEAPGAPLQKRYRLSRINRNKDDSGVSVALFH

Annotated regions:
phrase: SRELEDLPLDILVRIICGVEHEDLKQLFHVSKTIREATMIAKQSHFAY
type: DOMAIN
name: F-box_dom
description: F-box domain
Protein sequence:
MQKLRVFLLALAALCISCEAKYFATNCELVHELRRQGFPEDKMRDWVCLIQNESGRNTSKMGTINKNGSRDYGLFQINDKYWCSKTSTPGKDCNVTCAEMLLDDITKASKCAKKIYKRHKFQAWYGWRNHCQGTLPDISKC

Annotated regions:
phrase: CNVTCAEMLLDDITKASK
type: DOMAIN
name: Glyco_hydro_22_CS
description: Glycoside hydrolase family 22 domain
Protein sequence:
MASPAAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFTGLAHVKQCIVAHPVNPPYYIPLVELVPHPETSPATVDRTHALMRKIGQSPVRVLKEIDGFVLNRLQYAIISEAWRLVEEGIVSPSDLDLVMSDGLGMRYAFIGPLETMHLNAEGMLSYCDRYSEGMKRVLKSFGSIPEFSGATVEKVNQAMCKKVPADPEHLAARREWRDECLKRLAKLKRQMQPQ

Annotated regions:
phrase: GFVLNRLQYAIISEAWRLVEEGIVSPSDLDLVMSDGLGMRYAFIGPLETMHLNAEGMLSYCDRYSEGMKRVLKSFGSIPEFSGATVEK
type: DOMAIN
name: 3HC_DH_C
description: 3-hydroxyacyl-CoA dehydrogenase, C-terminal

phrase: EIDGFVLNRLQYAIISEAWRLVEE
type: CONSERVED_SITE
name: 3-OHacyl-CoA_DH_CS
description: 3-hydroxyacyl-CoA dehydrogenase, conserved site

phrase: VLIVGSGLVGRSWAMLFASGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSCLLPSKLFTGLAHVKQCIVAHPVNPPYYIPLVELVPHPETSPATVDRTHALMRKIGQSPVRVLK
type: DOMAIN
name: 3-OHacyl-CoA_DH_NAD-bd
description: 3-hydroxyacyl-CoA dehydrogenase, NAD binding
Protein sequence:
MAEGSRSPLRSFVEVAPGSHFPIQNLPFGVFRRRGSPEPEPPRPAVAIGDFALDLAAVSDAGLFHGPLLSASPCFRQETLNMFLGMGRPAWKEARATLQKILSADEPVLRDNEALKKKCLVPMSDTEMLLPITVGDYTDFFCSVHHARNCGFIFRGPQTPVNPNWFQLPVGYHGRASSVIVSGTDIIRPKGQGHPTGDSRPYFGPSKKLDFELEMAAIVGPGNELGKPIDINDAEEHIFGLMIMNDWSARDIQAWETIPLGPFLGKSFSTTVSPWIVTMDALKPFTCEAPKQEPEPLPYLAEKNHVNYDIPLEVWIKPKEQSEPSMVAKSNFKHLYWTLTQQLAHHTVNGCNLRPGDMFATGTLSGPETESLGCLLELTWNGQKEISVGNSTRKFLEDGDEVILTACCKGEGYNVGFGTCTGKVLPALP

Annotated regions:
phrase: TDFFCSVHHARNCGFIFRGPQTPVNPNWFQLPVGYHGRASSVIVSGTDIIRPKGQGHPTGDSRPYFGPSKKLDFELEMAAIVGPGNELGKPIDINDAEEHIFGLMIMNDWSARDIQAWETIPLGPFLGKSFSTTVSPWIVTMDALKPFTCEAPKQEPEPLPYLAEKNHVNYDIPLEVWIKPKEQSEPSMVAKSNFKHLYWTLTQQLAHHTVNGCNLRPGDMFATGTLSGPETESLGCLLELTWNGQKEISVGNSTRKFLEDGDEVILTACCKGEGYNVGFGTCTGK
type: DOMAIN
name: Fumarylacetoacetase-like_C
description: Fumarylacetoacetase-like, C-terminal

phrase: QNLPFGVFRRRGSPEPEPPRPAVAIGDFALDLAAVSDAGLFHGPLLSASPCFRQETLNMFLGMGRPAWKEARATLQKILSADEPVLRDNEALKKKCLVPMSDTEMLL
type: DOMAIN
name: Fumarylacetoacetase_N
description: Fumarylacetoacetase, N-terminal
Protein sequence:
MIDLKLLREDPDVVRRSQLSRGEDPALVDALLTADTARRTAISTADSLRAEQKAASKGVGGASPEERPALLQRAKDLAEQVKAAEATQSETEAAFTAAHMAIPNVILDGVPAGGEDDYAVLEVVGEPRAIDNPKDHLELGESLGLIDMARGAKVAGSRFYFLTGQGALLQLGLLQLALRLAVDNGFIPMIPPVLVRPEVMAGTGFLGAHADEVYRLEADDLYLVGTSEVPMAGYHADEIVDLSEGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCTPADAEAEHQRLLAWQREMLAQIEVPYRVIDVAAGDLGASAARKFDCEAWVPTQGTYRELTSTSNCTTFQARRLATRYRDANGKPQIAATLNGTLGTTRWLVSILENHQQPDGSVRVPAALVGFVGTEVLEPKG

Annotated regions:
phrase: DHLELGESLGLIDMARGAKVAGSRFYFLTGQGALLQLGLLQLALRLAVDNGFIPMIPPVLVRPEVMAGTGFLGAHADEVYRLEADDLYLVGTSEVPMAGYHADEIVDLSEGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCTPADAEAEHQRLLAWQREMLAQIEVPYRVIDVAAGDLGASAARKFDCEAWVPTQGTYRELTSTSNCTTFQARRLATRYRDANGKPQIAATLNGTLGTTRWLVSILENHQQPDGSVRV
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: ADDLYLVGTSEVPMAGYHADEIVDLSEGPLRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEGFVYCTPADAEAEHQRLLAWQREMLAQIEVPYRVIDVAAGDLGASAARKFDCEAWVPTQGTYRELTSTSNCTTFQARRLATRYRDANGKPQIAATLNGTLGTTRWLVSILEN
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: MIDLKLLREDPDVVRRSQLSRGEDPALVDALLTADTARRTAISTADSLRAEQKAASKGVGGASPEERPALLQRAKDLAEQVKAAEATQSETEAAFTAAHMAIPN
type: DOMAIN
name: Ser-tRNA-synth_1_N
description: Serine-tRNA synthetase, type1, N-terminal
Protein sequence:
MDVTAIVMAAGEGTRMKSNHAKVSHQILGKPMACWVIDAALAAGCTRVVVVVGSHSDEVRALISAAYEGTPAADAIECVEQVERLGTAHAVRTALDATGIDAGPVVVLNGDLPLIQADTIAAFANTVANGSNAGAVLTFTPPVPFGYGRIELAEDGTVNRIIEQKDCTPEQDAELLECNAGCYAFDGALLAAHIGEVGNDNAQAEYYLPDMVEILKRHGHAVTISHCEDYRDGLGVNSRVQLAELTAIARDRINERFMTEGVTFIDPAQAWIGPDAQIGRDTIVWPQTHLIGACRIGEGCQLGPNSRLTNVVAGNDCSLDETVAIDVVIENGVTCGPRAYLRPGTHLLDGAHVGTHVEIKKSTIGEGSKVPHLSYIGDTTMGAGVNVGAGSITCNYDGKNKHATTIGDRTFIGSDTMMVAPVNIGADVVTGASSCITRDVPDGALAVERSDQRIVEGYTELRRARL

Annotated regions:
phrase: AIVMAAGEGTRMKSNHAKVSHQILGKPMACWVIDAALAAGCTRVVVVVGSHSDEVRALISAAYEGTPAADAIECVEQVERLGTAHAVRTALDATGIDAGPVVVLNGDLPLIQADTIAAFANTVANGSNAGAVL
type: DOMAIN
name: MobA-like_NTP_Trfase
description: MobA-like NTP transferase

phrase: TTIGDRTFIGSDTMMVAPVNIGADVVTGASSCI
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: DAQIGRDTIVWPQTHLIGACRIGEGCQLGPNSRLT
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: GVTFIDPAQAWIGPDAQIGRDTIVWPQTHLIGACRIGEGCQLGPNSRLTNVVAGNDCSLDETVAIDVVIENGVTCGPRAYLRPGTHLLDGAHVGTHVEIKKSTIGEGSKVPHLSYIGDTTMGAGVNVGAGSITCNYDGKNKHATTIGDRTFIGSDTMMVAPVNIGADVVTGASSCITRDVPDGALAVERSD
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain
Protein sequence:
MMIKVGAAINGTDSPKAMKREHDNDDGDRTGRHKRPKTDGFTEAIQQGKFEVRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDSNTPERVCTVTADEKTVLNILKDVLPRLEDNFSERDPCEVRMLVHQSHAGALIGRNGSKIKELREKCSARLKIFTGCAPGSTDRVLITSGEQKNVLGIIEEVMKELKEIPIKGSATPYLPAFNYDPSNISDYGGFPGNMPAGGPPNNRGPAPQRGGQGPPGGPRSYGGAITQGGGQRSFEAGDFQQFRGGPGPVPGYAMSAPGYPPQQGQFGAPNNAGYGYGPGGGGPVTTAQVTIPSDLGGTIIGRGGERIARIRQESGAQITLEQSNGQPERIITIKGTEQQIHSAQYLLQQCVRNSTQGRERFGGSV

Annotated regions:
phrase: TAQVTIPSDLGGTIIGRGGERIARIRQESGAQITLEQSNGQPERIITIKGTEQQIHSAQYLLQ
type: DOMAIN
name: KH_dom_type_1
description: K Homology domain, type 1

phrase: VRMLVHQSHAGALIGRNGSKIKELREKCSARLKIFTGCAPGSTDRVLITSGEQKNVLGIIEEV
type: DOMAIN
name: KH_dom_type_1
description: K Homology domain, type 1

phrase: VRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDSNTPERVCTVTADEKTVLN
type: DOMAIN
name: KH_dom_type_1
description: K Homology domain, type 1

phrase: PVTTAQVTIPSDLGGTIIGRGGERIARIRQESGAQITLEQSNGQPERIITIKGTEQQIHSAQYLLQQCV
type: DOMAIN
name: KH_dom
description: K Homology domain

phrase: GKFEVRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDSNTPERVCTVTADEKTVLNILKDVLPRL
type: DOMAIN
name: KH_dom
description: K Homology domain

phrase: DPCEVRMLVHQSHAGALIGRNGSKIKELREKCSARLKIFTGCAPGSTDRVLITSGEQKNVLGIIEEVMKEL
type: DOMAIN
name: KH_dom
description: K Homology domain
Protein sequence:
MWLINWFYDLLASLGLLNKHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHECFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDDVRHQLGLYQTTGKGKVPLEGIRPIEVFMCSVVMRQGYGEGIRWLSQYV

Annotated regions:
phrase: KHAKLLFLGLDNAGKTTLLHMLKNDRVAILQPTAHPTSEELAIGNNRFTTFDLGGHQQARRLWKDYFPEVSGIVFLVDAKDHECFPESKAELDALLAMEELAKVPFLILGNKIDHPDAVSEDDV
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain
Protein sequence:
MLSRVVRQRSRSAISSFKLRAHAAFAETRIGVGISVQATRLQSTKLSANPEEIYTKISDSADPKRNQFFQYTWGSWLENDKLKKSHRETRFSIEGVSNLVQELNLTRKDPANVDSSGEPLLQIKPVQQLKDGSFVLTNNLSNKLIGEAQDKDAKLLVKSIASIHEGKDLVLRIPYKLESDYSISQKIKSEVATLDFLSLKLGLNVPKVVAYGDNRSNALQTPFILMEYIEGDLLMKKWNPLAADSEETDASLKSVIQPISDFQDKILSVNFNKFGSLYFHDDVSVLDQADVPYDGEENPLLVNRWRIGPSIERQFAKNKNHLSEKIVKEFNGPWKADAPLSLITSVASIELENAKNRLGLAQADSASKVEDVEVLKKQIETFEHLQAIGSKLFNSKSKSIMNVEELFRPKLFVPDLDPLNVIESNDKSYFIDFEYSTIKPFILTSYPNFVAYHGAKVYNLEEDIPGFTEMDEVEKQQYEFMYYKTRNERLWELELNSRRHDLIAVASPHVKVLKSPYLQALELKTDKDYLYVEGAIVQLQAMWDAYVANELCGSSSSEFPVQYTEEFLDRHQTDLEEYQIETVSSPFAATGGWIPQDMFETLKEQGIIVETENGNYKVEAEKALEEEPEEK

Annotated regions: