nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MARIEAPQDALGRLIEALRVLPGVGPKSAQRMAFYLLQHDRNGAAVLAQSLGEAVETVGHCACCNTFSETQVCSTCSDERRDPSLLCIVETPADQVMVEQTLSFKGNYFVLMGRLSPLDGMGPNEISFDRLLNRIETPDTGVPIREVVLATNFTSEGEATAHYIGEVLKPKGIKVTRIARGIPVGGELEYVDAGTLARALMDRR

Annotated regions:
phrase: SLLCIVETPADQVMVEQTLSFKGNYFVLMGRLSPLDGMGPNEISFDRLLNRIETPDTGVPIREVVLATNFTSEGEATAHYIGEVLKPKG
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: LLCIVETPADQVMVEQTLSFKGNYFVLMGRLSPLDGMGPNEISFDRLLNRIETPDTGVPIREVVLATNFTSEGEATAHYIGEVLKPKGIKVTRI
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: SLLCIVETPADQVMVEQTLSFKGNYFVLMGRLSPLDGMGPNEISFDRLLNRIETPDTGVPIREVVLATNFTSEGEATAHYIGEVLKPKGIKVTRIARGIPVGGELEYVDAGTLAR
type: DOMAIN
name: TOPRIM_RecR
description: RecR, TOPRIM domain

phrase: SLLCIVETPADQVMVEQTLSFKGNYFVLMGRLSPLDGMGPNEISFDRLLNRIETPDTGVPIREVVLATNFTSEGEATAHYIGEVLKPKGIKVTRIARGI
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain
Protein sequence:
MTKIVFMGTPAFSVPILESLIEAGYDVQAVVTQPDRPVGRKKVITPTPVKEAALKHNLLVLQPEKISGSPEMEKVIDLAPDLIVTAAFGQFLPEKILKAPKLGAINVHASLLPKYRGGAPVHYSIIEGEKETGVTIMEMVKKMDAGAILSQRAIPITKQDDVGTMFEKLSILGKELLLETLPKLIAGEITPIPQVEEEATFSPNITREQERIDWQKTAEAIDNQVRGMRPWPTAFTTYQGTNWKIWAVTPLTETTTSAPGTIIQRSKKALWIACGEGTVLQIDRLQPAGKGQLTIQEFLNGVGQNVAEKDKVD

Annotated regions:
phrase: NITREQERIDWQKTAEAIDNQVRGMRPWPTAFTTYQGTNWKIWAVTPLTETTTSAPGTIIQRSKKALWIACGEGTVLQIDRLQPAGKGQLTIQEFLNG
type: DOMAIN
name: Formyl_trans_C
description: Formyl transferase, C-terminal

phrase: KIVFMGTPAFSVPILESLIEAGYDVQAVVTQPDRPVGRKKVITPTPVKEAALKHNLLVLQPEKISGSPEMEKVIDLAPDLIVTAAFGQFLPEKILKAPKLGAINVHASLLPKYRGGAPVHYSIIEGEKETGVTIMEMVKKMDAGAILSQRAIPITKQDDVGTMFEKLSILGKELLLETLPKLIAGEITPIPQVEEEATFSPN
type: DOMAIN
name: Met-tRNA-FMT_N
description: Methionyl-tRNA formyltransferase, N-terminal domain

phrase: EQERIDWQKTAEAIDNQVRGMRPWPTAFTTYQGTNWKIWAVTPLTETTTSAPGTIIQRSKKALWIACGEGTVLQIDRLQPAGKGQLT
type: DOMAIN
name: Met-tRNA-FMT_C
description: Methionyl-tRNA formyltransferase, C-terminal domain

phrase: GVTIMEMVKKMDAGAILSQRAIP
type: ACTIVE_SITE
name: GART_AS
description: Phosphoribosylglycinamide formyltransferase, active site

phrase: KIVFMGTPAFSVPILESLIEAGYDVQAVVTQPDRPVGRKKVITPTPVKEAALKHNLLVLQPEKISGSPEMEKVIDLAPDLIVTAAFGQFLPEKILKAPKLGAINVHASLLPKYRGGAPVHYSIIEGEKETGVTIMEMVKKMDAGAILSQRAIPITKQDDVGTMFEKLSILGKELLLE
type: DOMAIN
name: Formyl_transf_N
description: Formyl transferase, N-terminal
Protein sequence:
MSAQGDCEFLVQRARELVPQDLWAAKAWLITARSLYPADFNIQYEMYTIERNAERTATAGRLLYDMFVNFPDQPVVWREISIITSALRNDSQDKQTQFLRSLFETLPGRVQCEMLLKVTEQCFNTLERSEMLLLLLRRFPETVVQHGVGLGEALLEAETIEEQDSPVNCFRKLFVCDVLPLIINNHDVRLPANLLYKYLNKAAEFYINYVTRSTQSENQHQGAQDTSDLMSPSKRSSQKYIIEGLTEKSSHIVDPWERLFKILNVVGMRCEWQMDKGRRSCSDLLHRMKELCRYMNSFDSEAHNNYKNQVLYSTMLVFFKSAFQYVSSIQPSLFQGPNAPSQVPLILLEDVANVYGDVEIDRSKHIHKKRKLAEGREKTMSSDDEECSAKGRNRHIVVSKADLSNSIEVLESFKLARESWELLYSLEFLDKEFTRICLAWKTDTWLWLRIFLTDMIIYQGQYKKAIASLHHLAALQGSLSQPQITGQGTLEHQRALIQLATCHFALGEYRMTCEKVLDLMCYMVLPIQDGGKPQEEPSKVKPKCRKGLDLKLLPCTSKAIMPYCLHLMLACFKLRAFTDSRDDMALGHVIVLLQQEWPRGENLFLKAISKICQQGNFQYENFFSYVTNIDMLEEFAYLRTQEGGKIHLELLPNQGMLIKHHTVTRGITKGVKEDFRLAMERQVSRCGENLMAVLHRFCINEKILLLQTLT

Annotated regions:
Protein sequence:
MKAVVFAYHDIGCTGLRALAQAGYQIAAIFTHTDDAAENHFFASVARTAAQLGVPVYAPEDVNHPLWIDRIRSMAPDVIFSFHYRHMLNDAIISSASRGAFNLHASLLPKYRGRAPLNWVLANGERETGVTLHHMVKRADAGAIIAQSKVPIADHDDALTLHHKMCAAAGELLANTLPDIRTGSDVAHPQDESQASYVGRRTPEDGRIDWQLPAQRIHNLVRAVTDPWPGAFSFVGSGKFIVWQSKVRHDYPANRPGTILSVAPLVVACAEGALEIVTGQSDSGVYMQGSQLAQTLGLVAGAWLHNQPAAVLQRRTRVLILGVNGFIGNHLTERLLLDDNFDVYGLDIGSDAISRFIGHERFHFVEGDISIHSEWIKYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYKKRIIFPSTSEVYGMCTDATFDEDSSNLVVGPINKQRWIYSVSKQLLDRVIWAYGDKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGGQKRCFTDIHDGIEALFRIIENRQHNCDGQIINIGNADNEASIRQLAEQLLASFERHPLRNRFPPFAGFREVESSSYYGKGYQDVEHRKPSISNAKRLLNWQPKVTMDKTIDDTLDFFLQNVEPGDAAQ

Annotated regions:
phrase: VLILGVNGFIGNHLTERLLLDDNFDVYGLDIGSDAISRFIGHERFHFVEGDISIHSEWIKYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYKKRIIFPSTSEVYGMCTDATFDEDSSNLVVGPINKQRWIYSVSKQLLDRVIWAYGDKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGGQKRCFTDIHDGIEALFRIIENRQHNCDGQIINI
type: DOMAIN
name: Epimerase_deHydtase
description: NAD-dependent epimerase/dehydratase

phrase: RVLILGVNGFIGNHLTERLLLDDNFDVYGLDIGSDAISRFIGHERFHFVEGDISIHSEWIKYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRDCVKYKKRIIFPSTSEVYGMCTDATFDEDSSNLVVGPINKQRWIYSVSKQLLDRVIWAYGDKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGGQKRCFTDIHDGIEALFRIIENRQHNCDGQIINIGNADNEASIRQLAEQLLASFERHPLRNRFPPFAGFREVESSSYYGKGYQDVEHRKPSISNAKRLLNWQPKVTMDKTIDDTLDF
type: DOMAIN
name: Arna-like_SDR_e
description: Bifunctional polymyxin resistance protein ArnA-like, extended (e) SDRs

phrase: TPEDGRIDWQLPAQRIHNLVRAVTDPWPGAFSFVGSGKFIVWQSKVRHDYPANRPGTILSVAPLVVACAEGALEIVTGQSDSGVYMQGSQLA
type: DOMAIN
name: Formyl_trans_C
description: Formyl transferase, C-terminal

phrase: QIAAIFTHTDDAAENHFFASVARTAAQLGVPVYAPEDVNHPLWIDRIRSMAPDVIFSFHYRHMLNDAIISSASRGAFNLHASLLPKYRGRAPLNWVLANGERETGVTLHHMVKRADAGAIIAQSKVPIADHDDALTLHHKMCAAAGELLA
type: DOMAIN
name: Formyl_transf_N
description: Formyl transferase, N-terminal
Protein sequence:
MSRGLELLIAQTILQGFDAQYGRFLEVTSGAQQRFEQADWHAVQQAMKSRIHLYDHHVGLVVEQLRCITDGKSTDAAFLLRVKEHYTRLLPDYPRFEIAESFFNSVYCRLFDHRSLTPERLFIFSSQPERRFRTIPRPLAKDFFPDHGWEPLLTRILSDLPLRLPWQNKSRDIHYIIAHLTETFGAEALHRSHLQVANELFYRNKAAWLVGKLLTPAGTLPFLLPIHRTDEGELFVDTCLTTTAEASIVFGFARSYFMVYAPLPAALVEWLREILPGKTTAELYMAIGCQKHAKTESYREYLLYLANSDEQFIEAPGIRGMVMLVFTLPGFDRVFKIIKDRFAPQKEMSAAHVRACYQLVKEHDRVGRMADTQEFENFVLEKRRIAPALMTLLRQEAPEKIIDLGDQIVIRHLYIERRMVPLNIWLEQVEGQQLRDAIEEYGNAIRQLAAANIFPGDMLFKNFGVTRHGRVVFYDYDEICYMTEVNFRDIPQARYPEDELASEPWYSVSPGDVFPEEFRHWLCADPRIGPLFEEMHADLFRADYWRALQTRIREGHVEDVYAYRRKQRFCFRFAA

Annotated regions:
phrase: EQFIEAPGIRGMVMLVFTLPGFDRVFKIIKDRFAPQKEMSAAHVRACYQLVKEHDRVGRMADTQEFENFVLEKRRIAPALMTLLRQEAPEKIIDLGDQIVIRHLYIERRMVPLNIWLEQVEGQQLRDAIEEYGNAIRQLAAANIFPGDMLFKNFGVTRHGRVVFYDYDEICYMTEVNFRDIPQARYPEDELASEPWYSVSPGDVFPEEFRHWLCADPRIGPLFEEMHADLFRADYWRALQTRIREGHVEDVYAY
type: DOMAIN
name: AceK_kinase
description: Isocitrate dehydrogenase kinase/phosphatase (AceK), kinase domain

phrase: AQTILQGFDAQYGRFLEVTSGAQQRFEQADWHAVQQAMKSRIHLYDHHVGLVVEQLRCITDGKSTDAAFLLRVKEHYTRLLPDYPRFEIAESFFNSVYCRLFDHRSLTPERLFIFSSQPERRFRTIPRPLAKDFFPDHGWEPLLTRILSDLPLRLPWQNKSRDIHYIIAHLTETFGAEALHRSHLQVANELFYRNKAAWLVGKLLTPAGTLPFLLPIHRTDEGELFVDTCLTTTAEASIVFGFARSYFMVYAPLPAALVEWLREILPGKTTAELYMAIGCQKHAKTESYREYLLYLANS
type: DOMAIN
name: AceK_regulatory
description: Isocitrate dehydrogenase kinase/phosphatase (AceK), regulatory domain
Protein sequence:
MERFPIDVTMVPVGPVRGTIRPPGSKSITNRAFLVAALADGESRLEGWLDADDTQAMRTALSALGAELAPEGSTMVVRGRSGRLSAPEEAVDVRSSGTTARFITAAAALADGPVRVDGSAQLRRRPIEPLVVALRSAGVGVDYLVATGALPICVHPAPLPGGHLAIDASVSSQFASGLMLVSPFAERDTEIDFVDGVAVSRTYLETTAEVMRAFGASVSVDESVSVGSGRQYVGRHYEIEADASAATYPLVAGAITGGVVTVIGIPAASTQADLGVLDVLSAMGCTVDRRPTSITLSAPSDGKLQPVDVDLSLAPDGALSIAVACLFASGPSTLRGLSTLRFKETDRLTALATELGKLGADTTVTDDTIVVVPGAPSGARITTYDDHRMAMAFSLAGLVIPEVVIDDPGCVAKTWPGYWSALEELRPGSVIAGPTATIVAIDGPGGVGKTTVSRTLAEKLGLGHLDTGAFYRGATAAVLRSGVSISDPVAVVDVVHRAALTFRDGAMLLDEVDISDEIRSSSVTSAVSAVAAIPEVRDRMVQLQRRWVAHQPKGAVVEGRDIGTVVFPDADLKIFLTARPDVRARRRAGEVADADVGSIQRDLERRDRADSSREVSPLRAADDAVVIDTSDLPMEGVVEVALSHVAHLG

Annotated regions:
phrase: IVAIDGPGGVGKTTVSRTLAEKLGLGHLDTGAFYRGATAAVLRSGVSISDPVAVVDVVHRAALTFRDGAMLLDEVDISDEIRSSSVTSAVSAVAAIPEVRDRMVQLQRRWVAHQPKGAVVEGRDIGTVVFPDADLKIFLTARPDVRARRRAGEVADADVGSIQRDLERRDRADSSREVSPLRAADDAVVIDT
type: DOMAIN
name: Cytidylate_kinase_dom
description: Cytidylate kinase domain

phrase: VAIDGPGGVGKTTVSRTLAEKLGLGHLDTGAFYRGATAAVLRSGVSISDPVAVVDVVHRAALTFRDGAMLLDEVDISDEIRSSSVTSAVSAVAAIPEVRDRMVQLQRRWVAHQPKGAVVEGRDIGTVVFPDADLKIFLTARPDVRARRRAGEVADADVGSIQRDLERRDRADSSREVSPLRAADDAVVIDTSDLPMEGVVEVALSH
type: DOMAIN
name: Cytidylate_kinase_dom
description: Cytidylate kinase domain

phrase: VGPVRGTIRPPGSKSITNRAFLVAALADGESRLEGWLDADDTQAMRTALSALGAELAPEGSTMVVRGRSGRLSAPEEAVDVRSSGTTARFITAAAALADGPVRVDGSAQLRRRPIEPLVVALRSAGVGVDYLVATGALPICVHPAPLPGGHLAIDASVSSQFASGLMLVSPFAERDTEIDFVDGVAVSRTYLETTAEVMRAFGASVSVDESVSVGSGRQYVGRHYEIEADASAATYPLVAGAITGGVVTVIGIPAASTQADLGVLDVLSAMGCTVDRRPTSITLSAPSDGKLQPVDVDLSLAPDGALSIAVACLFASGPSTLRGLSTLRFKETDRLTALATELGKLGADTTVTDDTIVVVPGAPSGARITTYDDHRMAMAFSLAGLVIPEVVIDDPGCVAKTWPGYWS
type: DOMAIN
name: Enolpyruvate_Tfrase_dom
description: Enolpyruvate transferase domain

phrase: RFKETDRLTALATELGKL
type: CONSERVED_SITE
name: EPSP_synthase_CS
description: 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site
Protein sequence:
MPAFDTPAMMLILWAVIGYGLGSIPFGLILTRAMGMGDLRQIGSGNIGTTNVLRTGNKGAAALTLLLDGGKGAVAVLLARAFAGEDAAQVAALAAFVGHCYPIWLGFKGGKGVATFLGLWLALAWPVGVACCLSWLAGAAVTRISSMGALVAAASSTFWLVLLDQGAGFVLGIVLTLMVFWRHRANIARLKARTEPKIGQKSA

Annotated regions:
Protein sequence:
MTIKTETEKPALTYSKTRGLVELITAFMKQRRMGLNDFIQKLATNSYACKHPEVQSILNLTPPQDPELMNSNPSPPPSPSQQINLGPSSNPSAKPSDFHFLKVIGKGSFGKVLLARHRTDDQFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYSAEIASALGYLHSLNIVYRDLKPENILLDSQGHIILTDFGLCKENIEPNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNISNAARHLLEGLLQKDRTKRLGCKDDFTEIKNHVFFSPINWDDLNAKKMTPPFNPNVTGPNDLRHFDPEFTDEPVPSSIGCSPDCALATASIKEAAEAFVGFSYAPSMDSYL

Annotated regions:
phrase: FHFLKVIGKGSFGKVLLARHRTDDQFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYSAEIASALGYLHSLNIVYRDLKPENILLDSQGHIILTDFGLCKENIEPNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNISNAARHLLEGLLQKDRTKRLGCKDDFTEIKNHVF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: IVYRDLKPENIL
type: ACTIVE_SITE
name: Ser/Thr_kinase_AS
description: Serine/threonine-protein kinase, active site

phrase: SPINWDDLNAKKMTPPFNPNVTGPNDLRHFDPEFTDEPVPSSIGCSPDCALATASIKEAAEAFVGFSYA
type: DOMAIN
name: AGC-kinase_C
description: AGC-kinase, C-terminal

phrase: FHFLKVIGKGSFGKVLLARHRTDDQFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYSAEIASALGYLHSLNIVYRDLKPENILLDSQGHIILTDFGLCKENIEPNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNISNAARHLLEGLLQKDRTKRLGCKDDFTEIKNHVF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: SPINWDDLNAKKMTPPFNPNVTGPNDLRHFDPEFTDEPVPSSIGCSPDCALATASIKEAAEAFVGFSYAPSMDSY
type: DOMAIN
name: AGC-kinase_C
description: AGC-kinase, C-terminal

phrase: VTGPNDLRHFDPEFTDEPVPSSIGCSPDCALATASIKEAAEAFVGFS
type: DOMAIN
name: Pkinase_C
description: Protein kinase, C-terminal

phrase: FHFLKVIGKGSFGKVLLARHRTDDQFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYSAEIASALGYLHSLNIVYRDLKPENILLDSQGHIILTDFGLCKENIEPNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNISNAARHLLEGLLQKDRTKRLGCKDDFTEIKNHVF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: IGKGSFGKVLLARHRTDDQFYAVKVLQKKAIL
type: BINDING_SITE
name: Protein_kinase_ATP_BS
description: Protein kinase, ATP binding site
Protein sequence:
MIDVNKFESMQIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFDERIFGPTKDWECACGKYKRIRYKGIVCDRCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGIPSRMGLVLDMSPRALEEIIYFASYVVIESGNTPLEKKQLLSEREYREKKAQYGNEFEAAMGAEAIKRLLNNVDLEKEARDLKETLKDASGQKRTRAVRRLDIIEAFVTSGNEPAWMVMDAIPVIPPDLRPMVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPGIIVQNEKRMLQEAVDALIDNGRRGRPVAGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIDVGPFLKMNQMGLPRQMALELFKPFIMKELVKRELASNIKNAKRKIEHADDDVWGVLEDVIKEHPVLLNRAPTLHRLGIQAFEPVLVSGKAMRLHPLACEAYNADFDGDQMAIHVPLSDEAQAEARLLMLAAHHILAPKDGKPVVTPSQDMVIGNYYLTTEEIGREGEGMIFKDLNEAQKAYQSGYVHLHSRVGIQVSSMPDKPFTDDQKQAVLVTTVGKAIFNNILPGKFPYLNEPTNDNLIAGTPDKYFLKPGEDIHQFLDAQEIIPPFKKGFLADIIAEVYKQYHVTATSLLLDRMKDLGYNISTKSGLTVGVADITGLKEKPAIIAEAHKQVNTISKQFRRGLITDDERYERVIGVWNDAKDQIQQKLIESFNADNPIFMMSDSGARGNISNFTQLAGMRGLMAAPNGKIMELPILSNFREGLSVLEMFISTHGARKGMTDTALKTANSGYLTRRLVDVAQDVIVREKDCGTDRGLRIHAIMEGNEVIEPLYDRILGRYTMKTVFDPETHDEIVGNNVLIDEDLAHKIVDAGVTEVTIRSAFTCNTKHGVCEHCYGRNMATGDEVEVGEAVGTVAAQSIGEPGTQLTMRNFHTGGVAGDDITQGLPRVQEIVESRNPKGRAEISEVTGTVELIEENPAERTKEVTVKGETDTRTYTLPLTARMAVSEGDFIHRGAALNIGSIDPKQLIQVRDVLSTENYLLREVQKVYRMQGVEIGDKHVEIMIRQMLRKVRVMDPGDTDVLPGTLMDIADFKDENYKTLIAGGIPATSRPVILGITKAALETNSFLSAASFQETTRVLTDAAIRGKNDPLIGLKENVIIGKIIPAGTGMPVYRHIKPKEVGNVADGVYSISDLEKQMQEQDASK

Annotated regions:
phrase: AWMVMDAIPVIPPDLRPMVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPGIIVQNEKRMLQEAVDALIDNGRRGRPVAGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIDVGPFLKMNQMGLPRQMALELFKPFIMKELVKRELASNIKNAKRKIEHADDDVWGVLEDVIKEHPVLLNRAPTLHRLGIQAFEPVLVSGKAMRLHPLACEAYNADFDGDQMAIHVPLSDEAQAEARLLMLAAHHILAPKDGKPVVTPSQDMVIGNYYL
type: DOMAIN
name: RNA_pol_N
description: RNA polymerase, N-terminal

phrase: HILAPKDGKPVVTPSQDMVIGNYYLTTEEIGREGEGMIFKDLNEAQKAYQSGYVHLHSRVGIQVSSMPDKPFTDDQKQAVLVTTVGKAIFNNILPGKFPYLNEPTNDNLIAGTPDKYFLKPGEDIHQFLDAQEIIPPFKKGFLADIIAEVYKQYHVTATSLLLDRMKDLGYNISTKSGLTVGVAD
type: DOMAIN
name: RNA_pol_Rpb1_3
description: RNA polymerase Rpb1, domain 3

phrase: ITDDERYERVIGVWNDAKDQIQQKLIESFNADNPIFMMSDSGARGNISNFTQLAGMRGLMAAPNGKIMELPILSN
type: DOMAIN
name: RNA_pol_Rpb1_4
description: RNA polymerase Rpb1, domain 4

phrase: GKRVDYSGRSVIDVGPFLKMNQMGLPRQMALELFKPFIMKELVKRELASNIKNAKRKIEHADDDVWGVLEDVIKEHPVLLNRAPTLHRLGIQAFEPVLVSGKAMRLHPLACEAYNADFDGDQMAIHVPLSDEAQAEARLLM
type: DOMAIN
name: RNA_pol_asu
description: RNA polymerase, alpha subunit

phrase: NKFESMQIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFDERIFGPTKDWECACGKYKRIRYKGIVCDRCGVEVTRSKVRRERMGHIELAAPVTHIWYFKGIPSRMGLVLDMSPRALEEIIYFASYVVIESGNTPLEKKQLLSEREYREKKAQYGNEFEAAMGAEAIKRLLNNVDLEKEARDLKETLKDASGQKRTRAVRRLDIIEAFVTSGNEPAWMVMDAIPVIPPDLRPMVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLNAPGIIVQNEKRMLQEAVDALIDNGRRGRPVAGPGNRPLKSLSHMLKGKQGRFRQN
type: DOMAIN
name: RNA_pol_Rpb1_1
description: RNA polymerase Rpb1, domain 1

phrase: GLSVLEMFISTHGARKGMTDTALKTANSGYLTRRLVDVAQDVIVREKDCGTDRGLRIHAIMEGNEVIEPLYDRILGRYTMKTVFDPETHDEIVGNNVLIDEDLAHKIVDAGVTEVTIRSAFTCNTKHGVCEHCYGRNMATGDEVEVGEAVGTVAAQSIGEPGTQLTMRNFHTGGVAGDDITQGLPRVQEIVESRNPKGRAEISEVTGTVELIEENPAERTKEVTVKGETDTRTYTLPLTARMAVSEGDFIHRGAALNIGSIDPKQLIQVRDVLSTENYLLREVQKVYRMQGVEIGDKHVEIMIRQMLRKVRVMDPGDTDVLPGTLMDIADFKDENYKTLIAGGIPATSRPVILGITKAA
type: DOMAIN
name: RNA_pol_Rpb1_5
description: RNA polymerase Rpb1, domain 5
Protein sequence:
MLKYMLDTNIVIYVIKRRPLEILSRFNQNAGKMCVSSITVAELYYGAEKSEYPERNIAVIEDFLSRLTILDYQPKHAAHFGNIKAELSKQGKLIGENDIHIAAHARSEGLILVSNNLREFERVIALRTENWV

Annotated regions:
phrase: YMLDTNIVIYVIKRRPLEILSRFNQNAGKMCVSSITVAELYYGAEKSEYPERNIAVIEDFLSRLTILDYQPKHAAHFGNIKAELSKQGKLIGENDIHIAAHARSEGLILVSNNLREFER
type: DOMAIN
name: PIN_dom
description: PIN domain

phrase: LKYMLDTNIVIYVIKRRPLEILSRFNQNAGKMCVSSITVAELYYGAEKSEYPERNIAVIEDFLSRLTILDYQPKHAAHFGNIKAELSKQGKLIGENDIHIAAHARSEGLILVSNNLREF
type: DOMAIN
name: PIN_dom
description: PIN domain
Protein sequence:
MDSPLTAREIRERFINFFRRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPLAKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEFAIPVERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDAKILPGNMKDNFWEMGDTGPCGPCSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRETDGLLKPLPKKSIDTGMGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADHARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGFFATLVDVVVQSLGDAFPELKKDPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKSQGKGAGGEDLIMLDIYAIEELRAKGLEATDDSPKYNYHSDSSGAYVFECTVATVLALRREKMFVEEVVTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIYGNLKVGDQVRLFIDEPRRRPVMSNHTATHILNFALRSVLGEADQKGSLVAPDRLRFDFTAKGAMSTQQIKEAEEIVNAMIEAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLQNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLRRSLSIMEAKVKAQTAPNKDVQREIADLGEALATAVIPQWQKDEQRETLKSLKKVMDDLDRASKADVQKRVLEKTKQLIDSNPNQPLVILEMESGASAKALNEALKLFKTHSPQTSAMLFTVDNEAGKITCLCQVPQNAANRGLKASEWVQQVSGLMDGKGGGKDVSAQATGKNVGCLQEALQLATSFAQLRLGAVEN

Annotated regions:
phrase: VRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLQNSSHAGAFVIVTEEAIAKGIRR
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD

phrase: VRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLQNSSHAGAFVIVTEEAIAKGIRRI
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD

phrase: QPLVILEMESGASAKALNEALKLFKTHSPQTSAMLFTVDNEAGKITCLCQVPQNAANRGLKASEWVQQVSGLMDGKGGGKDVSAQATGKNVGCLQEALQLATSF
type: DOMAIN
name: DHHA1_dom
description: DHHA1 domain

phrase: LTAREIRERFINFFRRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPLAKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEFAIPVERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDAKILPGNMKDNFWEMGDTGPCGPCSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRETDGLLKPLPKKSIDTGMGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADHARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGFFATLVDVVVQSLGDAFPELKKDPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKSQGKGAGGEDLIMLDIYAIEELRAKGLEATDDSPKYNYHSDSSGAYVFECTVATVLALRREKMFVEEVVTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIYGNLKVGDQVRLFIDEPRRRPVMSNHTATHILNFALRSVLGEADQKGSLVAPDRLRFDFTAKGAMSTQQIKEAEEIVNAMIEAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLQNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALR
type: DOMAIN
name: Ala-tRNA-synth_IIc_core
description: Alanyl-tRNA synthetase, class IIc, core domain

phrase: EIRERFINFFRRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPSHPLAKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALELLTQEFAIPVERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDDAKILPGNMKDNFWEMGDTGPCGPCSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNRETDGLLKPLPKKSIDTGMGLERLVSVLQNKMSNYDTDLFVPYFEAIQKGTGARPYTGKVGAEDADGIDMAYRVLADHARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGFFATLVDVVVQSLGDAFPELKKDPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKSQGKGAGGEDLIMLDIYAIEELRAKGLEATDDSPKYNYHSDSSGAYVFECTVATVLALRREKMFVEEVVTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHIGTIYGNLKVGDQVRLFIDE
type: DOMAIN
name: Ala-tRNA-synth_IIc_N
description: Alanyl-tRNA synthetase, class IIc, N-terminal
Protein sequence:
MAIRLYRAYTPGTRNRSVLGFEELVRIKPRKKLTSGQHSGKGRNNRGIITSRHRGGGHKRLYRRMDFRRNKIDVPGRIDSIEYDPNRNTYICLVNYEDGEKRYILHPRGIKIGDMIVSGSEAPISRGNALPLSKMPLGTTIHNVEITPGKGGQLARAAGAVAKLIAKEGRLATLRSPSGEVRLISQDCLATVGQIGNADINNKNFGKAGSKRWLGKRPKVRGVVMNPVDHPHGGGEGRAPIGREKPLTPWGYTAFGRRSRKIRKYSNIFILRRRRRN

Annotated regions:
phrase: RGNALPLSKMPLGTTIHNVEITPGKGGQLARAAGAVAKLIAKEGRLATLRSPSGEVRLISQDCLATVGQIGNADINNKNFGKAGSKRWLGKRPKVRGVVMNPVDHPHGGGEGRAPIGREKPLTPW
type: DOMAIN
name: Ribosomal_uL2_C
description: Large ribosomal subunit protein uL2, C-terminal

phrase: GRNNRGIITSRHRGGGHKRLYRRMDFRRNKIDVPGRIDSIEYDPNRNTYICLVNYEDGEKRYILHPRGIKIGDMIV
type: DOMAIN
name: Ribosomal_uL2_RNA-bd_dom
description: Large ribosomal subunit protein uL2, RNA-binding domain

phrase: ISRGNALPLSKMPLGTTIHNVEITPGKGGQLARAAGAVAKLIAKEGRLATLRSPSGEVRLISQDCLATVGQIGNADINNKNFGKAGSKRWLGKRPKVRGVVMNPVDHPHGGGEGRAPIGREKPLTPWGY
type: DOMAIN
name: Ribosomal_uL2_C
description: Large ribosomal subunit protein uL2, C-terminal

phrase: PKVRGVVMNPV
type: CONSERVED_SITE
name: Ribosomal_uL2_CS
description: Large ribosomal subunit protein uL2, conserved site
Protein sequence:
MQLKSLEISGFKSFADKTKIDFQAGMTGIVGPNGSGKSNIIEAIRWVLGEQAVKSLRGTKMTDVIFAGSANRKPLNMAKVTITFDNSDHFLPLDYAEVSITRKLFRNGDSDYLINNQSCRLKDITNLMIDTGLGKDSFSVISQGRVEAVFNAKPEERRSIIEDVAGVLKYKKDKFTTENKLAETTDYLDRVNDIIAELNQQKGPLEEQASLARDYQDQKQKFDYLDRSRLVKKLTIARDQLQGVNEKLASAKALVAKYQQQVDAGATKLANLKTQQTAQLKQKDELVAQNLELIKTIENTQGQQGVDAERRQNQQSEQERLTASLTATEQQIATQTEQQTQLEQTLSEQQAQVKAVKAQVAELTTATSAAGRQQLADELEKLRNAYIDEKQVQAELNNEAKNLVKQHQQSGSQSTALAERLAQAQANLKRVQTTVDVHNREQRDLENQVSQQQATLTAQQAQVKTNAERIDEQQQRWLDAAGLMQREKSRLEALQAVQERYTNFYAGVRMVLQHRQQFSGVAGAVSELLTVPDQYTKAVEVALGGQLQNIVCDTQQTAKTVVNFLKQNHAGRATFLPIERITARQLPVNTERDLSQQPGVLGVASELVDCESRLTAIKRYLLGTTAIVDTLDHAMAISRSRRFRCKLVTIDGETIAASGAITGGATRHDDNGLLQQQQSAEKIAANVAQMQSELVTYEQGLADLKKANQDLTVQVETTRQQLSELKDRLSQTQAQLQAAQSEQTQLSRQVKALTYEQQQTQADDSYED

Annotated regions:
phrase: FSGVAGAVSELLTVPDQYTKAVEVALGGQLQNIVCDTQQTAKTVVNFLKQNHAGRATFLPIERITARQLPVNTERDLSQQPGVLGVASELVDCESRLTAIKRYLLGTTAIVDTLDHAMA
type: DOMAIN
name: SMC_hinge
description: SMCs flexible hinge

phrase: LKSLEISGFKSFADKTKIDFQAGMTGIVGPNGSGKSNIIEAIRWVLGEQAVKSLRGTKMTDVIFAGSANRKPLNMAKVTITFDNSDHFLPLDYAEVSITRKLFRNGDSDYLINNQSCRLKDITNLMIDTGLGKDSFSVISQGRVEAVFNAKPEERRSIIEDVAGVLKYKKDKFTTENKLAETTDYLDRVNDIIAELNQQKGPLEEQASLARDYQDQKQKFDYLDRSRLVKKLTIARDQLQGVNEKLASAKALVAKYQQQVDAGATKLANLKTQQTAQLKQKDELVAQNLELIKTIENTQGQQGVDAERRQNQQSEQERLTASLTATEQQIATQTEQQTQLEQTLSEQQAQVKAVKAQVAELTTATSAAGRQQLADELEKLRNAYIDEKQVQAELNNEAKNLVKQH
type: DOMAIN
name: RecF/RecN/SMC_N
description: RecF/RecN/SMC, N-terminal

phrase: SGVAGAVSELLTVPDQYTKAVEVALGGQLQNIVCDTQQTAKTVVNFLKQNHAGRATFLPIERITARQLPVNTERDLSQQPGVLGVASELVDCESRLTAIKRYLLGTTAIVDTLDHAMAI
type: DOMAIN
name: SMC_hinge
description: SMCs flexible hinge
Protein sequence:
MLEAMREKPPLVHCITNYVAMNIAANVLLASGASPAMVHAPEEAGEFAGIASALTVNIGTLSTQWLDGMRAAAKAAASSGKPWVLDPVAHYATAFRRQAVADLLALKPTIIRGNASEIIALAGGESRGQGVDSRDPVEQAEDSARRLAERQQAIVAVTGAVDFVTDGNRAVRIKGGSVLMPQVTALGCALTCLVGAFAATAPEDLFGATVAALATFAVAGEDAALGAAGPGSFAWRFLDALAALDGEALDARARVSIA

Annotated regions:
Protein sequence:
MDSTFNELGVSPALIATLKDNNINQPTTIQQLAIPQFLQHQNLIVHSPTGTGKTAVFGIPVIETLLKKPSKGTTQTLVVAPTRELAEQIKTTFINFAKHTHLKVVSLIGGIPIWQQLKQLENQPEIVVGTMGRVMDLLERGVIKFEHLEHLIIDEVDLMLDRGFKRKLFDLLSRIEKFEQIAVYSASYNEETIETAKQITKNGIFLAAPELKQNAPEPDNKLIDQFVCYLFSNRKKQALYSLVSQTRAKSIIVFCDTKKLVDELCIFLRKNDVKTYPLHGDKAQFIRERNLKLFANTTAPIVLVTTDLIGRGIHVEGVDMVVNYSACVNFETYLHRMGRTGRNNHKGSCITFCTSHEKQAFLKLLEQVNDKRISPLRPMRLRLIPLKCKTQPKKGKLSLQSVQKIYVNPRSNGTFKRVPLAGDLFKSRMRQPERDMQKNKLHDSDWQSNM

Annotated regions:
phrase: NINQPTTIQQLAIPQFLQHQNLIVHSPTGTGKTAVFGIPVIETLLKKPSKGTTQTLVVAPTRELAEQIKTTFINFAKHTHLKVVSLIGGIPIWQQLKQLENQPEIVVGTMGRVMDLLERGVIKFEHLEHLIIDEVDLMLDRGFKRKLFDLLSRIEKFEQIAVYSASYNEETIETAKQITKNGIFLAAPELKQNAPEPDNKLIDQ
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: IPQFLQHQNLIVHSPTGTGKTAVFGIPVIETLLKKPSKGTTQTLVVAPTRELAEQIKTTFINFAKHTHLKVVSLIGGIPIWQQLKQLENQPEIVVGTMGRVMDLLERGVIKFEHLEHLIIDEVDLMLDRGFKRKLFDLLSRIEKFEQIAVYSASYNEETIETAKQITKNGIF
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: TTIQQLAIPQFLQHQNLIVHSPTGTGKTAVFGIPVIETLLKKPSKGTTQTLVVAPTRELAEQIKTTFINFAKHTHLKVVSLIGGIPIWQQLKQLENQPEIVVGTMGRVMDLLERGVIKFEHLEHLIIDEVDLMLDRGFKRKLFDLLSRIEKFEQIAVYSASYNEETI
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: RKKQALYSLVSQTRAKSIIVFCDTKKLVDELCIFLRKNDVKTYPLHGDKAQFIRERNLKLFANTTAPIVLVTTDLIGRGIHVEGVDMVVNYSACVNFETYLHRMGRTGRNNHKGSCITFCTSHEKQAFLKLLEQVNDKRISPLRPMRLRL
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: STFNELGVSPALIATLKDNNINQPTTIQ
type: DOMAIN
name: RNA_helicase_DEAD_Q_motif
description: RNA helicase, DEAD-box type, Q motif

phrase: KKQALYSLVSQTRAKSIIVFCDTKKLVDELCIFLRKNDVKTYPLHGDKAQFIRERNLKLFANTTAPIVLVTTDLIGRGIHVEGVDMVVNYSACVNFETYLHRMGRTGR
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: DELCIFLRKNDVKTYPLHGDKAQFIRERNLKLFANTTAPIVLVTTDLIGRGIHVEGVDMVVNYSACVNFETYLHRMGRTGRN
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like