nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSIFPAQPSDKKAVEEGAAFMPRFDASGLITAIVTDARDGELLMVAHMNEEALRLTLETGIAHYWSRSRKTLWKKGETSGNLQSVVELRTDCDQDALWLKVHVAGDGPTCHTGRRSCFYRQVVSSGGKVALTMASDHDQ

Annotated regions:
phrase: MVAHMNEEALRLTLETGIAHYWSRSRKTLWKKGETSGNLQSVVELRTDCDQDALWLKVHVAGDGPTCHTGRRSCF
type: DOMAIN
name: PRib_AMP_CycHydrolase_dom
description: Phosphoribosyl-AMP cyclohydrolase domain
Protein sequence:
MSGFSLEKFNFVLLFPVLSLLFWAIVLLLLDAFKKLSRNFYIGASIIALFSTLCFLLIYNGFVLDNSHAFFDLFVSDNYAIFAQIVILVFSMLYLLMDKDEQKAEFFSLFLFMIASLILMISSTNLIVIFLALEGSSLALYTLIALRGTHNAISSSIKYFTLAAVGAGFFVFACAFVYLKTKSLDLDNLLHSEYISDPILLCAGVMFLVIVGVKLSIAPFHFWLKDVYYGVHTNFIAFISIVPKIAMIIVVLRIFSALGGGVKFEYIVALLAIFSMLAVSIVALIQKDVKKMLAYSSITHSSFILAVIVSSMSVSSQGDGTSYLLSIFALFVYWISFAFANYGIFLILSLFQKSSFESFSGLFDQRPVLSIMLAIFILCIAGIPPFGIFWGKILILASILNSGYYALVFAVALSSMIMLYAYLKILIYVFFKKAQIVESANLDVKQKIILCLCLIGSVSCVFLLL

Annotated regions:
phrase: STNLIVIFLALEGSSLALYTLIALRGTHNAISSSIKYFTLAAVGAGFFVFACAFVYLKTKSLDLDNLLHSEYISDPILLCAGVMFLVIVGVKLSIAPFHFWLKDVYYGVHTNFIAFISIVPKIAMIIVVLRIFSALGGGVKFEYIVALLAIFSMLAVSIVALIQKDVKKMLAYSSITHSSFILAVIVSSMSVSSQGDGTSYLLSIFALFVYWISFAFANYGIFLILSLFQKSSFESFSGLFDQRPVLSIMLAIFILCIAGIPPFGIFWGKILILASILNSGYYALVFAVALSSM
type: DOMAIN
name: ND/Mrp_TM
description: NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domain
Protein sequence:
MENRWQGLIVWQVDRMRIRTWNSLVKYHMYVSKRATGWFYRHHYESRHPRVSSEVHTPLGEASLVIKTYWGLQTGERDWHLGHGCSIEWRLRRYSTQVDPGLADQLIHLYYFDCFTDSAIRKALLGHIVITRCDYPAGHTKVGSLQYLALTALTKTKRRKPPLPSVRKLAGDRWNNPQKTRDRRGNHTMNGH

Annotated regions:
Protein sequence:
MHLSEITHPNQLRNLSLSQLRSLARQIREKHLQTAANSPVGCHLGPGLGVVELTLALYKTLDLDRDKVIWDVGHQAYAHKMLTGRYHNFHTIRQKGGISGYLKRSESRFDHFGAGHASTSISAALGMAIARDRRGENFKVVAIIGDGALTGGMAYEAINHAGHLPKTNLMVILNDNGMSISPNVGAIPRYLNRLRLSPPVQFLADSLEEQLKNLPLVGSSLSPEIDRLKETVKLVTAVQNNKAGIIFEELGFTYVGPVDGHNLAELLDAFELAHGISGPVLVHVATVKGKGYPPAEAEQVSYHAQSRFDLATGKPYPPTKPTPPSYSKVFGHTLCKLAERDPRIIGITAAMDTGTGLDKLKEKLPDQFVDVGIAEQHAVTLAAGMACEGMRPVVAIYSTFLQRAYDQIIHDVCIQKLPVFFCLDRAGVVGADGPTHQGMYDIAYLRCIPEMVLMAPKDEAELQRMVVTGIQYTKGPIAMRYPRGAGVGVPLAEEGWEPIPIGKAEVLRSGGEVLILAYGSMVHPSLQAAEILKEHGISTTVVNARFAKPLDTELILPLAQQSRLVVTVEEGCLMGGFGSAVGEALLDADIRVPLLRLGVPDVWVEHATPEESLAELGLNSVGIAERIRAKVEALQGQRASQAQAILGSS

Annotated regions:
phrase: PSYSKVFGHTLCKLAERDPRIIGITAAMDTGTGLDKLKEKLPDQFVDVGIAEQHAVTLAAGMACEGMRPVVAIYSTFLQRAYDQIIHDVCIQKLPVFFCLDRAGVVGADGPTHQGMYDIAYLRCIPEMVLMAPKDEAELQRMVVTGIQYTKGPIAMRYPRG
type: DOMAIN
name: Transketolase-like_Pyr-bd
description: Transketolase-like, pyrimidine-binding domain

phrase: GKAEVLRSGGEVLILAYGSMVHPSLQAAEILKEHGISTTVVNARFAKPLDTELILPLAQQSRLVVTVEEGCLMGGFGSAVGEALLDADIRVPLLRLGVPDVWVEHATPEESLAELGLNS
type: DOMAIN
name: Transketolase_C
description: Transketolase, C-terminal domain

phrase: PSYSKVFGHTLCKLAERDPRIIGITAAMDTGTGLDKLKEKLPDQFVDVGIAEQHAVTLAAGMACEGMRPVVAIYSTFLQRAYDQIIHDVCIQKLPVFFCLDRAGVVGADGPTHQGMYDIAYLRCIPEMVLMAPKDEAELQRMVVTGIQYTKGPIAMRYPRGAGVG
type: DOMAIN
name: Transketolase-like_Pyr-bd
description: Transketolase-like, pyrimidine-binding domain

phrase: GADGPTHQGMYDIAYL
type: BINDING_SITE
name: Transketolase_BS
description: Transketolase binding site
Protein sequence:
MVCLFLGASSFIWSLAPAAAAFQLPRCQLLNQTISLEKRGCSGCHRVETTICSGYCATKDPNYKTSYNKAIQHVCTYGDLYYKTFEFPECVPGVDPVVTYPVALSCRCGGCAMATSDCTFESLQPDFCMNDIPFYH

Annotated regions:
phrase: PVALSCRCGGCAMATSDCTFESLQPDF
type: CONSERVED_SITE
name: Gonadotropin_bsu_CS
description: Gonadotropin, beta subunit, conserved site

phrase: PRCQLLNQTISLEKRGCSGCHRVETTICSGYCATKDPNYKTSYNKAIQHVCTYGDLYYKTFEFPECVPGVDPVVTYPVALSCRCGGCAMATSDCTFESLQPDF
type: DOMAIN
name: Glyco_hormone_CN
description: Glycoprotein hormone subunit beta

phrase: CSGYCA
type: CONSERVED_SITE
name: Gonadotropin_bsu_CS
description: Gonadotropin, beta subunit, conserved site
Protein sequence:
MVELEIVWLVRGAWITVWIVSILPLVIASIPTSKLNSFRELVLSFAGRGKILHPSSQKFTIPQKCFAHFYVIGVVWTTLLLAATWMYACKMAPLSSEEFQLSDIASRLAGGSDVFSVHKSNMTPVEHRFKVWRAVFLLLLMEIHVLRRLIESFYVFKYSPSARMHILGYFAGLFFYVTAPLSLCSNIAPEVAGFVGNQVAEFIANGKSHTSAPEFNLLSSISPLMKLGSLQWIGGAIFLWGWIHQRRCHAILGSLRENPSQAKEYIIPYGDWFGMVSSPHFLAEIVLYAGLLIASGGTDITIWLLFGFVAANLTYAAGETHRWYLRKFENYPANRHAIFPYVY

Annotated regions:
phrase: WIGGAIFLWGWIHQRRCHAILGSLRENPSQAKEYIIPYGDWFGMVSSPHFLAEIVLYAGLLIASGGTDITIWLLFGFVAANLTYAAGETHRWYLRKFENYPANRHAIFPYV
type: DOMAIN
name: 3-oxo-5_a-steroid_4-DH_C
description: 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal
Protein sequence:
MKTLIKNGSIVTKEGTVKTQDVLLHDGVISAIGLNLEETDAHVIEANGKLVTPGLVDLHVHLREPGGEAKETIETGTKAAAKGGFTTVAAMPNTRPVPDSAEQMSWLTGRIDETGVVRVLPYAAITTRQLGRELTDFAKLKEAGAFAFTDDGVGVQSAAMMLEAMKEAAKLEMAIVAHCEENTLIQNGSVHEGVFSKKHGIAGIPSVCESVHIARDVLLAEAAGVHYHVCHISTKESVRVVRDAKRAGIRVTAEVTPHHLLLCDEDIPGLDAHYKMNPPLRGKEDREALIEGLLDGTIDFIATDHAPHTEEEKGQGMERAPFGIVGLETAFPLLYTHFVKKGTFTLKQLVDWLTIDPAETFQLPYGRLEEGAPADVTIIDLEAERAIDPAHFASKGRNTPFAGWTCQGWPVATLVGGKLVWEEKEVAR

Annotated regions:
phrase: ATDHAPHTEEE
type: CONSERVED_SITE
name: Dihydroorotase_CS
description: Dihydroorotase, conserved site

phrase: DLHVHLRE
type: CONSERVED_SITE
name: Dihydroorotase_CS
description: Dihydroorotase, conserved site

phrase: LVTPGLVDLHVHLREPGGEAKETIETGTKAAAKGGFTTVAAMPNTRPVPDSAEQMSWLTGRIDETGVVRVLPYAAITTRQLGRELTDFAKLKEAGAFAFTDDGVGVQSAAMMLEAMKEAAKLEMAIVAHCEENTLIQNGSVHEGVFSKKHGIAGIPSVCESVHIARDVLLAEAAGVHYHVCHISTKESVRVVRDAKRAGIRVTAEVTPHHLLLCDEDIPGLDAHYKMNPPLRGKEDREALIEGLLDGTIDFIATDHAPHTEEEKGQGMERAPFGIVGLETAFPLLYTHFVKKGTFTLKQLVDWLTIDPAETFQLPYGRLEEGAPADVTIIDLEAERAIDPAHFASKGRNTPFAGWTCQGWPVATLVGGKL
type: DOMAIN
name: Amidohydro-rel
description: Amidohydrolase-related
Protein sequence:
MPLEQLNFITGNPNKLAEVKAILGDVVPLQSQSLDLTEIQGTIEDISKDKCRRAAALIGGSVLTEDTCLCFSALKELPGPYIKWFLQALGHEGLNNLLMAYEDKSAQAVCTFAYCSGPHHEPIIFEGRVTGKIVPARGPANFGWDPIFEYDGETYAEMDKAKKNTLSHRAIASSKLKQWLQAQQ

Annotated regions:
Protein sequence:
MTVARLRELLPDYARDLRLNLGSVTSQSNLSAQQLWGTVLAAAIASRGRTVLVELEPEALDHLSAEAATAARTAAALMAMNNVYYRSLHLLEDEEYSRLRAGLRMNALANPGVDKVDVELWSLAVSAVNGCGRCLTAHEHELRGRGVAREVIQDAIRVASVVHAVAVTVEALETSSGTNRVAAAD

Annotated regions:
phrase: EYSRLRAGLRMNALANPGVDKVDVELWSLAVSAVNGCGRCLTAHEHELRGRGVAREVIQDAIRVASVVHAVAVTVEA
type: DOMAIN
name: CMD-like
description: Carboxymuconolactone decarboxylase-like

phrase: GVDKVDVELWSLAVSAVNGCGRCLTAHEHELRGRGVAREVIQDAIRVA
type: DOMAIN
name: AhpD_core
description: Alkylhydroperoxidase AhpD core
Protein sequence:
MSDSKKSATVVMPRWRQYWVLTKPRVTQLAVFCAVIGMFLATPGMVPYPVLFGGIVGIWLLAGAAFAVNCLIEQAVDAKMKRTSWRPSATGEVTPLHIIIFSIILGSLGMIILWNFCNPLTMWLTLATFVGYAVIYTWLLKPATPQNIVIGGLSGAMPPALGWAAVTNTLSAEAWHLVLIIFVWTPPHFWALALYRRDDYVQSGLPMLPVTHGERFTLLNIVLYTLILIAATMLPYIYGMSGMVYLISAIILGLLFLAYVVALFISYSDALAKKTFRFSITYLSLLFAALLVDHYFL

Annotated regions:
Protein sequence:
MKVGVLALQGAVAEHIRLIEAVGGEGVVVKRAEQLAELDGLIIPGGESTTIGKLMRRYGFIEAIRDFSNQGKAVFGTCAGLIVIADKIAGQEEAHLGLMDMTVQRNAFGRQRESFETDLPVKGIDRPVRAVFIRAPLIDQVGNGVDVLSEYNGQIVAARQGHLLAASFHPELTDDSSMHAYFLDMIREAR

Annotated regions:
phrase: GLIIPGGEST
type: CONSERVED_SITE
name: PdxT/SNO_CS
description: PdxT/SNO family, conserved site
Protein sequence:
MAVPEPSMPLSRGGPGSASLSPPRGDRTLLVRHLPAELTAEEKEDLLKYFGAQSVRVLSDKGRLKHTAFATFPNEKAAIKALTRLHQLKLLGHTLVVEFAKEQDRVHSSCPASNAEKKKRLDDTVENDKEKKEPDVLTVENGIAPNHGLTFPLNSCLKYMYPPPSSTILANIVNALASVPKFYVQVLHLMNKMNLPTPFGPITARPPMYEDYVQLHAPLPPTSPQPPEEPPLPDEDEDLSSKESEYESSDEEDRQRMNKLMELANFQPKRPKTVKPRHVRKKRKIKDMLTVPSPASQSLHPVLLPSDVFDQPQPVGNKKIEFNISTNVPAALNKDLETEQNNEEKNSDSPDTGLDDSNTGFGKLFPKPNVNITEEIKEDSDEMPSQFISRRELEKGRISREEMETLSVFRSYEPGEPNCRIYVKNLARHVQEKDLKFIFGRYVDFSSETQRIMFDIRLMKEGRMKGQAFVGLPNEKAAAKALKEANGYVLFGKPMVVQFARSARPKHDSKEGKRK

Annotated regions:
phrase: RTLLVRHLPAELTAEEKEDLLKYFGAQSVRVLSDKGRLKHTAFATFPNEKAAIKALTRLHQLKLLGHTLVVEFAK
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: IYVKNLARHVQEKDLKFIFGRYVDFSSETQRIMFDIRLMKEGRMKGQAFVGLPNEKAAAKALKEANGYVLFGKP
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: LLVRHLPAELTAEEKEDLLKYFGAQSVRVLSDKGRLKHTAFATFPNEKAAIKALTRLHQLKLLGHT
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: TLLVRHLPAELTAEEKEDLLKYFGAQSVRVLSDKGRLKHTAFATFPNEKAAIKALTRLHQLKLLGHTLVVEF
type: DOMAIN
name: RBM40_RRM1
description: RBM40, RNA recognition motif 1

phrase: CRIYVKNLARHVQEKDLKFIFGRYVDFSSETQRIMFDIRLMKEGRMKGQAFVGLPNEKAAAKALKEANGYVLFGKPMVVQFAR
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: RIYVKNLARHVQEKDLKFIFGRYVDFSSETQRIMFDIRLMKEGRMKGQAFVGLPNEKAAAKALKEANGYVLFGKPMVV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: TLLVRHLPAELTAEEKEDLLKYFGAQSVRVLSDKGRLKHTAFATFPNEKAAIKALTRLHQLKLLGHTLVV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain
Protein sequence:
MAKLTKKMKAIKAGVDSTKAYEINEAIAVLKQFATAKFVESVDVAVNLGIDPRKSDQNVRGATVLPHGTGRTARVAVFTQGANAEAAKAAGADLVGMEDLAEQVKKGEMNFDVVIASPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKNGIIHTTIGKADFSPEQLKENLQALLAALVKAKPTTAKGIFIKKVSISTTMGAGVAVDQASL

Annotated regions:
phrase: MRVVGQLGQVLGPRGLMP
type: CONSERVED_SITE
name: Ribosomal_uL1_CS
description: Large ribosomal subunit protein uL1, conserved site
Protein sequence:
MSRFFAGGSDSDSDSSSDSEPVIRQQVAQFTFSDEEEDVKRVVRSKKEKRYEDLSNIIKSIRNHKKIKDMSSVLTSFEEFMRAYTKALPVVMKEENGVTPRIVVRALAELEDFVNESWDDKESRKNLSKNNNKALGTLRQKFRKYIKDFESDMKRFRAAPEDFAEEEEDDEREDEKGSDEEEEKVVVQVEPKAVSFKKEPEKAKPVKPVADSDSSDWGSDSDSDSTSSDEDAKYTSIRDRFLKKPEKGTEEIASAPSGVSGDDAFKKEKKKKTGEALSKKKKPKQDEMFDENEEEEEGWKVVNGTRSGASEQPKMFAKDAEIDTKLVVNKLNEVMAARGKKRTDRKMQIEFLRELRTVAETNNLGPAVAVKIRFNIVSAIFDYNPKVSGAMKLEHWSKLLEEIQELLKLLLAHEDVHLSESILDEYEEYDTAPFKIRGCMLTAVERLDDEFTKLLKECDPHSNEYVDRLKDEVPVTNIIEQVVTYVERLGNEMEICRIYLRKIDHLYYKFDPDVLKKRKGQLPANTITSVEEMDKLCRYIYAKDQTDRLRTRAILSHIFHHALHDNWFQARDLVLMSHLQETIHHSDPATQILYNRMMANLGLCAFRHGNIKDAHLCLVDLMMTGKPKELLAQGLVPQRQHERSLEQEKIEKQRQMPFHMHINLELLECVYLVSAMLLEIPYMAAHEFDARRRMISKTFYQQLRSSERQSLVGPPESMREHVVAAAKAMRHGDWNACANFIVNKKMNVKVWDLFYEANRVREMMIKFIKEESLRTYLFTYSNVFASISVPHLADMFKLPKSKVHSLISKMIINEELMASLDDPTETIVMHRSEPSRLQALSMQLADKVTNLVDANERIFEMKQGNFFQRGGNQGYNRDRQNYRNQNQNQNWNNNRRQDNRNRGNRGNQNRGEGREQREHHRDHHRDQREHREHQNREFREQREQMRNVEYQNKAE

Annotated regions:
phrase: IKEESLRTYLFTYSNVFASISVPHLADMFKLPKSKVHSLISKMIINEELMASLDDPTETIVMH
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain

phrase: FTFSDEEEDVKRVVRSKKEKRYEDLSNIIKSIRNHKKIKDMSSVLTSFEEFMRAYTKALPVVMKEENGVTPRIVVRALAELEDFVNESWDDKESRKNLSKNNNKALGTLRQKFRKYIKDFESDMKRFRAAPEDFAEEEEDDEREDEKGSDEEEEKVVVQVEPKAVSFKKEPEKAKPVKPVADSDSSDWGSDSDSDSTSSDEDAKYTSIRDRFLKKPEKGTEEIASAPSGVSGDDAFKKEKKKKTGEALSKKKKPKQDEMFDENEEEEEGWKVVNGTRSGASEQPKMFAKDAEIDTKLVVNKLNEVMAARGKKRTDRKMQIEFLRELRTVAETNNLGPAVAVKIRFNIVSAIFDYNPKVSGAMKLEHWSKLLEEIQELLKLLLAHEDVHLSESILDEYEEYDTAPFKIRGCMLTAVERLDDEFTKLLKECDPHSNEYVDRLKDEVPVTNIIEQVVTYVERLGNEMEICRIYLRKIDHLYYKFDPDVLKKRKGQLPANTITSVEEMDKLCRYIYAKDQTDRLRTRAILSHIFHHALHDNWFQARDLVLMSHLQETIHHSDPATQILYNRMMANLGLCAFRHGNIKDAHLCLVDLMMTGKPKELLAQGLVPQRQHERSLEQEKIEKQRQMPFHMHINLELLECVYLVSAMLLEIPYMAAHEFD
type: DOMAIN
name: EIF3C_N_dom
description: Eukaryotic translation initiation factor 3 subunit C, N-terminal domain

phrase: MMIKFIKEESLRTYLFTYSNVFASISVPHLADMFKLPKSKVHSLISKMIINEELMASLDDPTETIVMHRSEPSRLQALSMQLADKVTN
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain

phrase: FHMHINLELLECVYLVSAMLLEIPYMAAHEFDARRRMISKTFYQQLRSSERQSLVGPPESMREHVVAAAKAMRHGDWNACANFIVNKKMNVKVWDLFYEANRVREMMIKFIKEESLRTYLFTYSNVFASISVPHLADMFKLPKSKVHSLISKMIINEELMASLDDPTETIVMHRSE
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain
Protein sequence:
MRSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLVQVVYDPDLPEVFNVASTLRAEFCVQVKGVVRARPDSQVNAQMKTGEIEVLGKALTIINSSEPLPLSLDNYQNNSEEQRLKYRYLDLRRPEMAQRLMFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLVPSRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTSEQVMNKTEEMMRGLFLEMLNVDLGEFPRMTYNEAMRRFGSDKPDLRNPLELVDVADLLKDVEFAVFSGPANDEEGRVAALRIPGGASLSRKQIDDYTKFVGIYGAKGLAWMKLNDLTQGLEGIQSPVLKFLNENIVNEIINRTGAQTGDIILFGADQATVVAESMGALRLKAGEDFNLLEGQWRPLWVVDFPMFEKINGSFHAVHHPFTAPRGVTPQELEANPANRVSDAYDMVLNGCELGGGSVRIHNQEMQSAVFRILGITDEEAKEKFGFLLEALRYGTPPHAGLAFGLDRIIMLMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLAELGIAVVKTAKTED

Annotated regions:
phrase: VTLVGWVNRSRDLGGVVFLDLRDREGLVQVVYDPDLPEVFNVASTLRAEFCVQVKGVVRARPDSQVNAQMKTGEIEV
type: DOMAIN
name: NA-bd_OB_tRNA
description: OB-fold nucleic acid binding domain, AA-tRNA synthetase-type

phrase: LMFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLVPSRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTSEQVMNKTEEMMRGLFLEMLNVDLGEFPRMTYNEAMRRFGSDKPDLRNPLELVDVADLLKDVEFAVFSGPANDEEGRVAALRIPGGASLSRKQIDDYTKFVGIYGAKGLAWMKLNDLTQGLEGIQSPVLKFLNENIVNEIINRTGAQTGDIILFGADQATVVAESMGALRLKAGEDFNLLEGQWRPLWVVDFPMFEKINGSFHAVHHPFTAPRGVTPQELEANPANRVSDAYDMVLNGCELGGGSVRIHNQEMQSAVFRILGITDEEAKEKFGFLLEALRYGTPPHAGLAFGLDRIIMLMTGASSIRDVMAFPKT
type: DOMAIN
name: AspRS_core
description: Aspartate-tRNA ligase, type 1, core domain

phrase: RSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLVQVVYDPDLPEVFNVASTLRAEFCVQVKGVVRARPDSQVNAQMKTGEIEVLGKALTIINSSEPLPLSLDNYQNNSEEQRLKYRYLDLRRPE
type: DOMAIN
name: Asp-tRNA-ligase_1_N
description: Aspartate-tRNA ligase, type 1, anticodon recognition domain

phrase: RAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLVPSRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTSEQVMNKTEEMMRGLFLEMLNVDLGEFPRMTYNEAMRRFGSDKPDLRNPLELVDVADLLKDVEFAVFSGPANDEEGRVAALRIPGGASLSRKQIDDYTKFVGIYGAKGLAWMKLNDLTQGLEGIQSPVLKFLNENIVNEIINRTGAQTGDIILFGADQATVVAESMGALRLKAGEDFNLLEGQWRPLWVVDFPMFEKINGSFHAVHHPFTAPRGVTPQELEANPANRVSDAYDMVLNGCELGGGSVRIHNQEMQSAVFRILGITDEEAKEKFGFLLEALRYGTPPHAGLAFGLDRIIMLMTGASSIRDVMAF
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: FSGPANDEEGRVAALRIPGGASLSRKQIDDYTKFVGIYGAKGLAWMKLNDLTQGLEGIQSPVLKFLNENIVNEIINRTGAQTGDIILFGADQATVVAES
type: DOMAIN
name: GAD_dom
description: GAD domain

phrase: SEEQRLKYRYLDLRRPEMAQRLMFRAKVTSAVRRFLDSNGFLDIETPILTKATPEGARDYLVPSRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMTSEQVMNKTEEMMRGLFLEMLNVDLGEFPRMTYNEAMRRFGSDKPDLRNPLELVDVADLLKDVEFAVFSGPANDEEGRVAALRIPGGASLSRKQIDDYTKFVGIYGAKGLAWMKLNDLTQGLEGIQSPVLKFLNENIVNEIINRTGAQTGDIILFGADQATVVAESMGALRLKAGEDFNLLEGQWRPLWVVDFPMFEKINGSFHAVHHPFTAPRGVTPQELEANPANRVSDAYDMVLNGCELGGGSVRIHNQEMQSAVFRILGITDEEAKEKFGFLLEALRYGTPPHAGLAFGLDRIIMLMTGASSIRDVMAFPK
type: DOMAIN
name: Aa-tRNA-synt_II
description: Aminoacyl-tRNA synthetase, class II (D/K/N)
Protein sequence:
MSHEKSESCLQEKKHSSSFERFHDGTSLENNLLQNLKLSSQRVLEIAQKKGRSKCPKCNSSRMFYCYTCFVPVESVPSDEIPVVKLPLKIDIIKHPNETDGKSTAVHAKLLAHEDVTVYTYPCVPQYQDQKHEVVLVFPGPDSVSLSDSLLYIRGSGDMQNDSSCEPSLKRPKCSQQYDKSKNEGVEEKKPMHFLKKLIFIDSTWNQTNKIISDERLQGLQQVELMERKTCFWRHQKGTPNTYLSTIEAIYYFMIDYHTIILQKDYKGEYDDLLFFFSFMYRIINDAKKSAGKL

Annotated regions:
phrase: RMFYCYTCFVPVESVPSDEIPVVKLPLKIDIIKHPNETDGKSTAVHAKLLAHEDVTVYTYPCVPQYQDQKHEVVLVFPGPDSVSLSDSLLYIRGSGDMQNDSSCEPSLKRPKCSQQYDKSKNEGVEEKKPMHFLKKLIFIDSTWNQTNKIISDERLQGLQQVELMERKTCFWRHQKGTPNTYLSTIEAIYYFMIDYHTIILQKDYKGEYDDLLFFFSFMYRIINDAK
type: DOMAIN
name: DTW
description: DTW

phrase: MFYCYTCFVPVESVPSDEIPVVKLPLKIDIIKHPNETDGKSTAVHAKLLAHEDVTVYTYPCVPQYQDQKHEVVLVFPGPDSVSLSDSLLYIRGSGDMQNDSSCEPSLKRPKCSQQYDKSKNEGVEEKKPMHFLKKLIFIDSTWNQTNKIISDERLQGLQQVELMERKTCFWRHQKGTPNTYLSTIEAIYYFMIDYHTIILQKDYKGEYDDLLFFFSFMYR
type: DOMAIN
name: DTW
description: DTW
Protein sequence:
MKFTLISSCIAIAALAVAVDAAPGEKKISIPLAKNPNYKPSAKNAIQKAIAKYNKHKINTSTGGIVPDAGVGTVPMTDYGNDVEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNCGSRQTKYDPKQSSTYQADGRTWSISYGDGSSASGILAKDNVNLGGLLIKGQTIELAKREAASFANGPNDGLLGLGFDTITTVRGVKTPMDNLISQGLISRPIFGVYLGKASNGGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGTSTVASSFDGILDTGTTLLILPNNVAASVARAYGASDNGDGTYTISCDTSRFKPLVFSINGASFQVSPDSLVFEEYQGQCIAGFGYGNFDFAIIGDTFLKNNYVVFNQGVPEVQIAPVAQ

Annotated regions:
phrase: YYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNCGSRQTKYDPKQSSTYQADGRTWSISYGDGSSASGILAKDNVNLGGLLIKGQTIELAKREAASFANGPNDGLLGLGFDTITTVRGVKTPMDNLISQGLISRPIFGVYLGKASNGGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGTSTVASSFDGILDTGTTLLILPNNVAASVARAYGASDNGDGTYTISCDTSRFKPLVFSINGASFQVSPDSLVFEEYQGQCIAGFGYGNFDFAIIGDTFLKNNYVVFNQGVPEVQIA
type: DOMAIN
name: Aspergillopepsin-like_cat_dom
description: Aspergillopepsin-like catalytic domain

phrase: GILDTGTTLLI
type: ACTIVE_SITE
name: Aspartic_peptidase_AS
description: Aspartic peptidase, active site

phrase: YYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNCGSRQTKYDPKQSSTYQADGRTWSISYGDGSSASGILAKDNVNLGGLLIKGQTIELAKREAASFANGPNDGLLGLGFDTITTVRGVKTPMDNLISQGLISRPIFGVYLGKASNGGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGTSTVASSFDGILDTGTTLLILPNNVAASVARAYGASDNGDGTYTISCDTSRFKPLVFSINGASFQVSPDSLVFEEYQGQCIAGFGYGNFDFAIIGDTFLKNNYVVFNQGVPEVQI
type: DOMAIN
name: PEPTIDASE_A1
description: Peptidase family A1 domain

phrase: EYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNCGSRQTKYDPKQSSTYQADGRTWSISYGDGSSASGILAKDNVNLGGLLIKGQTIELAKREAASFANGPNDGLLGLGFDTITTVRGVKTPMDNLISQGLISRPIFGVYLGKASNGGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGTSTVASSFDGILDTGTTLLILPNNVAASVARAYGASDNGDGTYTISCDTSRFKPLVFSINGASFQVSPDSLVFEEYQGQCIAGFGYGNFDFAIIGDTFLKNNYVVFNQGVPEVQIAP
type: DOMAIN
name: PEPTIDASE_A1
description: Peptidase family A1 domain

phrase: LDFDTGSSDLW
type: ACTIVE_SITE
name: Aspartic_peptidase_AS
description: Aspartic peptidase, active site
Protein sequence:
MAEKKYALDFDFGEWEKYITESLGEPKFRAGQICGWLWQKRVCDPAEMTNLSKELRAELAEKLDFACPALVREQRSRDGTKKFLWRLRDGETVESVLIKEGDRLTLCVSTQVGCPLHCSFCATGLSGFARNLSAGEIAGQLLAAEKQIGREINNVVYMGMGEPLLNVDSVLKSVRMLNDPKMRNLGRRHITISTSGVIPGIEELAASGLGVRLAVSLHAADDELRSLLMPVNQTYPASELRDAMQKYQAATGDRITIEYALFGGVNDGVERARELVRYLKGIHVFVNLIPANDVAGRCEKPKAEDVLRFRSVLESAGFECEIRSERGADIDAACGQLRRKAHGGEAAPEGGARTLAKAAVPPRVDKSDEWKEKSAARVKGAKKDFPALRANEKKKAFSPSGGFVAYPGKRVRAQRPAGEKSYGAPNFGEKRGGRGNARDFETPLGARSRDEHAELRRGGKTDEARQDHRTRREEENHFERGVAAKHGYAEARAEKFDTRRPRKSGSCAPEKDSSRQRPRGKAKNGAGRGAADADSAFWKFYLRPKKSARGKKP

Annotated regions:
phrase: STQVGCPLHCSFCATGLSGFARNLSAGEIAGQLLAAEKQIGREINNVVYMGMGEPLLNVDSVLKSVRMLNDPKMRNLGRRHITISTSGVIPGIEELAASGLGVRLAVSLHAADDELRSLLMPVNQTYPASELRDAMQKYQAATGDRITIEYALFGGVNDGVERAR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LTLCVSTQVGCPLHCSFCATGLSGFARNLSAGEIAGQLLAAEKQIGREINNVVYMGMGEPLLNVDSVLKSVRMLNDPKMRNLGRRHITISTSGVIPGIEELAASGLGVRLAVSLHAADDELRSLLMPVNQTYPASELRDAMQKYQAATGDRITIEYALFGGVNDGVERARELVRYLKGIHVFVNLIPANDVAGRCEKPKAEDVLRFRS
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: EGDRLTLCVSTQVGCPLHCSFCATGLSGFARNLSAGEIAGQLLAAEKQIGREINNVVYMGMGEPLLNVDSVLKSVRMLNDPKMRNLGRRHITISTSGVIPGIEELAASGLGVRLAVSLHAADDELRSLLMPVNQTYPASELRDAMQKYQAATGDRITIEYALFGGVNDGVERARELVRYLKGIHVFVNLIPANDVAGRCEKPKAEDVLRFRSVLESAGF
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: EKKYALDFDFGEWEKYITESLGEPKFRAGQICGWLWQKRVCDPAEMTNLSKELRAELAEKLDFACPALVREQRSRDGTKKFLWRLRDGETVESVLIKEGDRLTLCVSTQVGCPLHCSFCATGLSGFARNLSAGEIAGQLLAAEKQIGREINNVVYMGMGEPLLNVDSVLKSVRMLNDPKMRNLGRRHITISTSGVIPGIEELAASGLGVRLAVSLHAADDELRSLLMPVNQTYPASELRDAMQKYQAATGDRITIEYALFGGVNDGVERARELVRYLKGIHVFVNLIPANDVAGRCEKPKAEDVLRFRSVLESAGFECEIRSERGADIDAACGQLRRKA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LDFDFGEWEKYITESLGEPKFRAGQICGWLWQKRVCDPAEMTNLSKELRAELAE
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MKLEIEIEHWPDGEWESITGGAAKATRDVEPALAHARLETSVLFTSDEQVHVLNREWRERDKPTNVLSFPMLDRDRLRALEPEGPPEMLGDIALAYETCAREAEEKGISLEAHATHLIVHGLLHLAGHDHVDSDAQAEEMEALEIAALAKLGIADPYGDRT

Annotated regions:
phrase: HGLLHLAGHD
type: CONSERVED_SITE
name: YbeY_CS
description: Endoribonuclease YbeY, conserved site
Protein sequence:
MLSVRISARQCSVRGLATQANNVSQPAKDNATNGSDAATEKKGTARYQRIQPSVALNSLKTKLSNDFQKQQPAQKIYSQFQSDLQQLISEQQVNPRHFVNSSICNSVLAKLILQSKSELDGQSIGESASIPPTPFEILETYLKYNLARHQHFIIVLKQFLIDLQPKEAINLWISFLEHAKQMPLNNTGTSQVQALTSIAYLMLSKESNSAPDVNVLTQLLNITPSKVPFLAIEQEIKSLGLTATTKDELLKSFDDLLLQWFTADKDAFINEFLKNSNDLKLITYLWKQYLKLATKDFTTSNQEIPGAFMIKLAQLDRSLDAVKIMTQLKEASADFKPSVSLYNSLLQTVAYIPAFGKEAQSIKLNRIQAIWNSYIKSSGNITVASYKAMLEALIIAGHFKTVESFWTLDVPDDVKANSEISDIYLKNFFASVKKVHFSQLKSKIPSKVHNLELANTILLAMVHSDASVGDIDSFYSHTFQSTEGIKPNDKTLAIKLRANLAAFGDSKNESILGTIGLSANSPTATLVIEEFLKICENEESATALLKALNIDNKSNDSAKKVSNFLDYYLQHGNWEYAEELFKKYLTDNVKSPSSVNYRLFNSMFKGFSELSITRNDTGFVSKQQVYWELCQRIHNRIFNECVISTLKSVSALSRRNAEFSENELDFINNTVLPYLVKLKIENSFKLQNPKYLQNMKSNDKIHIPKELL

Annotated regions:
Protein sequence:
MESAFTKEHSWSIISSFFEQKGLVRQQLDSFDQFVKTKMQEVINESPVIIVQSAPTAGIETQKRIAVRFGQIYVSKPPVYTESDGRTITVFPNEARIRDLTYASPLFIDVTKETLSELGVVDKHKYSRVPFGSLPVMLRSSYCVLYGLGDKDLIDLGECPYDQGGYFIVNGSEKVIVAQERMASNTVYVFKKAQPATYTHYAEIRSVPEKSSRNPSTLSMKLCRSPGVIRVSLPLVKQDVPLFVLYRALGFLSDKEIIDHILYEDDEEMFELLKESIEEGTVVQDQNVALDYIGKRSAPIGTPQEKRIVMAKDLLAKEVLPHIGTQEFCETKKAYFIGYIVQRLLLVALGRRNPDDRDHYGKKRMDLSGPLLASLFRTLFKKLCVDTTRHMQKCIENGREFNIALGLKASIITQGFRYALATGNWGDQAKAMQTRAGVAQVLNRYNFVSTLSHLRRVNTPIEKEGKLAAPRQLHNTHWGMVCPAETPEGQACGLVKNLSLMAYISVGSSSGPLVEFLEECGVESLEEISTSQLDAATKIFVNGVWVGIHSDPVGLIKSLKLLRRSLEMDKEVSIVRDIREKEIRVQSDAGRPCRPLLVVKDNKLVITAEDIRKLKRGEIKWDNLVTSGFIEFLDVEEEEMSMIAMNTKILADESRNSSDVSVSYTHCEIHPALILGICASTIPFPDHNQSPRNTYQSAMGKQAMGIYATNFLLRMDTLSNILFYPQKPLVTTKSMEYLRFKELPSGQNALVAIACYSGYNQEDSIIMNQSAIDRGLFRSFFYRTYTDQESMSRPGVNEEFCKPSRGAVLRMKNLNYNKLDDDGLISPGTRVTGDDVLIGKITPILDPERSTKEAPVYVYKDSSTAMRRTETGIVDTVIVTNKDGYKFSKVKVRSGRIPQMGDKFASRHAQKGTIGITLRQEDMPFTSEGIVPDIIINPHAIPSRMTIGHLIECLLGKVSAMSGEEGDATPFSGVTVDGISSRLKSYGFQQRGLEVMYNGMTGRKLRAQMFFGPTYYQRLKHMVDDKIHARARGPLQILTRQPVEGRSRDGGLRFGEMERDCIISHGASAFLKERLMDVSDAYSCYVCDFCGLLAMGGSKVNECKGCNNTTNVSMVEIPYAFKLLIQELMGMNIAPRIRFEE

Annotated regions:
phrase: GLVRQQLDSFDQFVKTKMQEVINESPVIIVQSAPTAGIETQKRIAVRFGQIYVSKPPVYTESDGRTITVFPNEARIRDLTYASPLFIDVTKETLSELGVVDKHKYSRVPFGSLPVMLRSSYCVLYGLGDKDLIDLGECPYDQGGYFIVNGSEKVIVAQERMASNTVYVFKKAQPATYTHYAEIRSVPEKSSRNPSTLSMKLCRSPGVIRVSLPLVKQDVPLFVLYRALGFLSDKEIIDHILYEDDEEMFELLKESIEEGTVVQDQNVALDYIGKRSAPIGTPQEKRIVMAKDLLAKEVLPHIGTQEFCETKKAYFIGYIVQRLLLVALGRRNPDDRDHYGKKRMDLSGPLLASLFRTLFKKLCVDTTRHMQKCIENGREFNIALGLKASIIT
type: DOMAIN
name: RNA_pol_bsu_protrusion
description: RNA polymerase, beta subunit, protrusion

phrase: ASNTVYVFKKAQPATYTHYAEIRSVPEKSSRNPSTLSMKLCRSPGVIRVSLPLVKQDVPLFVLYRALGFLSDKEIIDHILYEDDEEMFELLKESIEEGTVVQDQNVALDYIGKRSAPIGTPQEKRIVMAKDLLAKEVLPHIGTQEFCETKKAYFIGYIVQRLLLVALGRRNPDDRDHYGKKR
type: DOMAIN
name: RNA_pol_Rpb2_2
description: RNA polymerase Rpb2, domain 2

phrase: CASTIPFPDHNQSPRNTYQSAMGKQAMGIYATNFLLRMDTLSNILFYPQKPLVTTKSMEYLRFKELPSGQNALVAIACYSGYNQEDSIIMNQSAIDRGLFRSFFYRTYTDQESMSRPGVNEEFCKPSRGAVLRMKNLNYNKLDDDGLISPGTRVTGDDVLIGKITPILDPERSTKEAPVYVYKDSSTAMRRTETGIVDTVIVTNKDGYKFSKVKVRSGRIPQMGDKFASRHAQKGTIGITLRQEDMPFTSEGIVPDIIINPHAIPSRMTIGHLIECLLGKVSAMSGEEGDATPFSGVTVDGISSRLKSYGFQQRGLEVMYNGMTGRKLRAQMFFGPTYYQRLKHMVDDKIHARARGPLQILTRQPVEGRS
type: DOMAIN
name: DNA-dir_RNAP_su2_dom
description: DNA-directed RNA polymerase, subunit 2, hybrid-binding domain

phrase: IFVNGVWVGIHSDPVGLIKSLKLLRRSLEMDKEVSIVRDIREKEIRVQSDAGRPCRPLLVV
type: DOMAIN
name: RNA_pol_Rpb2_4
description: RNA polymerase Rpb2, domain 4

phrase: WDNLVTSGFIEFLDVEEEEMSMIAMNTKILADESRNSSDVSVSYTHCEIH
type: DOMAIN
name: RNA_pol_Rpb2_5
description: RNA polymerase Rpb2, domain 5

phrase: GDKFASRHAQKG
type: CONSERVED_SITE
name: RNA_pol_bsu_CS
description: RNA polymerase, beta subunit, conserved site

phrase: GGLRFGEMERDCIISHGASAFLKERLMDVSDAYSCYVCDFCGLLAMGGSKVNECKGCNNTTNVSMVEIPYAFKLLIQELMGMNIAPRI
type: DOMAIN
name: RNA_pol_Rpb2_7
description: RNA polymerase Rpb2, domain 7

phrase: QVLNRYNFVSTLSHLRRVNTPIEKEGKLAAPRQLHNTHWGMVCPAETPEGQACGLVKNLSLMAY
type: DOMAIN
name: RNA_pol_Rpb2_3
description: RNA polymerase Rpb2, domain 3