nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTIFNNYEVWFVIGSQHLYGPEALRQVTQHAEHVVNALNAEAKLPCKLVLKPLGTTPDEITHICRDANYDDKCAGMVVWLHTFSPAKMWINGLTILNKPLLQFHTQFNASLPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHAVVTGHWQDSQAQKRIGSWMRQAVSKQDTRHLKVVRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNEISDGDVSALVDEYESSYRLTAAAQIKGDKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMEDYTYHFENGNDLVLGSHMLEVCPSIAVEEKPILDVQYLGIGGKADPARLIFNTRTGPAINASLIDLGDRFRLLVNCVDTVETPHSLPKLPVANALWKAQPDLPTASEAWIVAGGAHHTVFSHSLDLNDMRQFAELHDIELTVIDNDTRLPAFKDALRWNEVYYGSKR

Annotated regions:
phrase: YEVWFVIGSQHLYGPEALRQVTQHAEHVVNALNAEAKLPCKLVLKPLGTTPDEITHICRDANYDDKCAGMVVWLHTFSPAKMWINGLTILNKPLLQFHTQFNASLPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHAVVTGHWQDSQAQKRIGSWMRQAVSKQD
type: DOMAIN
name: AraA_N
description: L-arabinose isomerase, N-terminal domain

phrase: GTSFMEDYTYHFENGNDLVLGSHMLEVCPSIAVEEKPILDVQYLGIGGKADPARLIFNTRTGPAINASLIDLGDRFRLLVNCVDTVETPHSLPKLPVANALWKAQPDLPTASEAWIVAGGAHHTVFSHSLDLNDMRQFAELHDI
type: DOMAIN
name: Ara_Isoase_C
description: L-arabinose isomerase, C-terminal

phrase: KVVRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVVNEISDGDVSALVDEYESSYRLTAAAQIKGDKRQNVLDAARIELGMKRFLEQGGFHAFTTTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMST
type: DOMAIN
name: AraA_central
description: L-arabinose isomerase, central domain
Protein sequence:
MIDRLAMIGVNVKTASREHVARLEKEWEKHLDTIGYASRGTVIIATCNRFEVYLDSPSRLVEDLASSIASPGGEGLVRLQGIDAARHLFRVASGLESQIIGDHEVLGQVRRAWLKSREKGFTTPLLDEVFHRALKTGARVRSESAISSGGVGYSSAAVSLAASLLGGGLDGARVGIVGAGMAAVGIARALCTRWRPRVVAVFNRTPERGWEVAGKCRGVESLVLPLDELAKLINELDALFVAIAGSTNILERGRVERGVSPRVIVDISNPPVTPKVAGRVFHMPEVEEEAKRMMEERLRWIPAAEAIIEEELEALLDALSRRRARESSRSVMRALSILAEREYERTLAGLRNGVDPREAVELALNSYTKKVGGALRRLLEEASDRGQLSLEDIEAILVSEFARIAENSGFKNGSTG

Annotated regions:
phrase: HLFRVASGLESQIIGDHEVLGQV
type: CONSERVED_SITE
name: GluRdtase_CS
description: Glutamyl-tRNA reductase, conserved site

phrase: LAASLLGGGLDGARVGIVGAGMAAVGIARALCTRWRPRVVAVFNRTPERGWEVAGKCRGVESLVLPLDELAKLINELDALFVAIAGSTNILERGRVERGVSPRVIVDISNPPVTPKVA
type: DOMAIN
name: Shikm_DH/Glu-tRNA_Rdtase
description: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase

phrase: AAEAIIEEELEALLDALSRRRARESSRSVMRALSILAEREYERTLAGLRNGVDPREAVELALNSYTKKVGGALRRLLEEASDRG
type: DOMAIN
name: 4pyrrol_synth_GluRdtase_dimer
description: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain

phrase: IGVNVKTASREHVARLEKEWEKHLDTIGYASRGTVIIATCNRFEVYLDSPSRLVEDLASSIASPGGEGLVRLQGIDAARHLFRVASGLESQIIGDHEVLGQVRRAWLKSREKGFTTPLLDEVFHRALKTGARVRS
type: DOMAIN
name: 4pyrrol_synth_GluRdtase_N
description: Glutamyl-tRNA reductase, N-terminal
Protein sequence:
MAAPQDVHVRICNQEIVKFDLEVKALIQDIRDCSGPLSELTELNTKVKEKFQQLKQRIQELEQSAREQDKESEKQLLLQEVENHKKQMLSNQTSWRKANLTCKLAIDNLEKAELLQGGDSLRQRKTTKESLAQTSSSITESLMGISRMMSQQVQQSEEAMQTLVSSSRTLLDANEEFKSMSGTIQLGRKLITKYNRRELTDKLLIFLALALFLATVLYIVKKRLFPFL

Annotated regions:
phrase: TSSSITESLMGISRMMSQQVQQSEEAMQTLVSSSRTLLDANEEFKSMSGTIQLGRKLITKYNRRELTDKLLIFLALALFLATVLYIVKKR
type: DOMAIN
name: Sec20_C
description: Sec20, C-terminal
Protein sequence:
MRVRETQMNWPNLWKWGTLILGLVIMCNASDNLWVTVYYGVPVWRDADTTLFCASDAQAHKTEVHNIWATHACVPTDPNPQEMFLENVTENFNMWRNKMAEQMQEDVISLWDQSLKPCVKLTPLCVTLTCTKANMINTSSKLDVLDDLGNIADDLRDCSFSTTTDLTDMKHTVYALFDMLDIVAFGTKINGDNSMINCNTSVIKQPCPKVSFDPIPIHYCTPAGYAILKCNDKNFNGTALCRNVSSVQCTHGIKPVVSTQLLLNGSLAEEEIIIRSENLTDNAKTIIVHLNKSVEINCTRPYNNTRKSVRIGPGQVFYRTGEIIGDIRRAHCRVNGTEWXGVLKQVAGKLEEHFKNKTIIFQPSLGGGDLEITMHHFNCRGEFFYCNTTKLFNCTVNENREGCNGSDPIILPCKIKQIINMWQEVGQAMYAPPIEGEISCNSSITGILLTRDGGXNNSTNETFRPEGGNIKDNWRSELYKYKVVQIEPLGVAPTKAKRRVVEREKRAVGIGAMIFGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQKFLGLWGCSGKIICTTNVPWNKTWSNRSFEEIWNNMTWIEWEREISNHTNTIYEILTEAQNQQDKNEKELLELDKWASLWTWFDITSWLWYIRIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQIPSPQQREPDRPERIEEGGGEQDRDRSVRLVTGFLAIVWDDLRSLCLFSYHRLRD

Annotated regions:
phrase: VQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQKFLGLWGCSGKIICTTNVPWNKTWSNRSFEEIWNNMTWIEWEREISNHTNTIYEILTEAQNQQDKNEKELLELD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWRDADTTLFCASDAQAHKTEVHNIWATHACVPTDPNPQEMFLENVTENFNMWRNKMAEQMQEDVISLWDQSLKPCVKLTPLCVTLTCTKANMINTSSKLDVLDDLGNIADDLRDCSFSTTTDLTDMKHTVYALFDMLDIVAFGTKINGDNSMINCNTSVIKQPCPKVSFDPIPIHYCTPAGYAILKCNDKNFNGTALCRNVSSVQCTHGIKPVVSTQLLLNGSLAEEEIIIRSENLTDNAKTIIVHLNKSVEINCTRPYNNTRKSVRIGPGQVFYRTGEIIGDIRRAHCRVNGTEWXGVLKQVAGKLEEHFKNKTIIFQPSLGGGDLEITMHHFNCRGEFFYCNTTKLFNCTVNENREGCNGSDPIILPCKIKQIINMWQEVGQAMYAPPIEGEISCNSSITGILLTRDGGXNNSTNETFRPEGGNIKDNWRSELYKYKVVQIEPLGVAPTKAKRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: MGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQKFLGLWGCSGKIICTTNVPWNKTWSNRSFEEIWNNMTWIEWEREISNHTNTIYEILTEAQNQQDKNEKELLELDKWASLWTWFDITSWLWYIRIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQI
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MDSAVALSVLGAGSYGTALAISLARQGQPVLLWGHDPQQVARLQQDRCNQEFLPDVPFPDSLQMTDDLAYAVSASRDLLVVVPSHVFGEVLLRIKPFMRPDTRVAWATKGLEPEHGRLLGDVAKEILGEQIPLAVLSGPTFARELAAGMPTAIAIAGTDEQFTSDMSALMHCGKSLRVYTNPDFIGLQIGGAVKNVIAIGAGLSDGLGFGANARTALITRGLVELQRLGLSLGADAKTFMGMAGLGDLVLTCTDNQSRNRRFGLALGQGKTVEQAMTEIGQVVEGYRNTKEVHVLAARQNVEMPICEQIYQILYQGKSAQDAALALLGRDQKGE

Annotated regions:
phrase: DFIGLQIGGAVKNVIAIGAGLSDGLGFGANARTALITRGLVELQRLGLSLGADAKTFMGMAGLGDLVLTCTDNQSRNRRFGLALGQGKTVEQAMTEIGQVVEGYRNTKEVHVLAARQNVEMPICEQIYQILYQGKSAQD
type: DOMAIN
name: G3P_DH_NAD-dep_C
description: Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal

phrase: SVLGAGSYGTALAISLARQGQPVLLWGHDPQQVARLQQDRCNQEFLPDVPFPDSLQMTDDLAYAVSASRDLLVVVPSHVFGEVLLRIKPFMRPDTRVAWATKGLEPEHGRLLGDVAKEILGEQIPLAVLSGPTFARELAAGMPTAIAIAGTDEQ
type: DOMAIN
name: G3P_DH_NAD-dep_N
description: Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal
Protein sequence:
MMFRDQVGVLAGWFKGWNECEQTVALLSLLKRVSQTQARFLQLCLEHSLADCAELHVLEGEANSPGIINQWQQESKDKVISLLLTHLPLLKPGNLDAKAEYMKLLPKILAHSIEHNQHIEESRQLLSYALIHPATSLEDRSALAMWLNHLEDRTSTSFGSQNRGRSDSVDYGQTHYYHQRQNSDDKLNGWQNSRDSGICISASNWQDKSLGCENGHVPLYSSSSVPATINTIGTGASTILSGQAHHSPLKRSVSLTPPMNVPNQPLGHGWMSHEDLRARGPQCLPSDHAPLSPQSSVASSGSGGSEHLEDQTTARNTFQEEGSGMKDVPAWLKSLRLHKYAALFSQMTYEEMMALTECQLEAQNVTKGARHKIVISIQKLKERQNLLKSLERDIIEGGSLRTPLQELHQMILTPIKAYSSPSTTPEVRCREPSLMESPSPDCKDSAAAVTSATASASAGASGGLQPPQLSSCDGELAVAPLPEGDLPGQFTRVMGKVCTQLLVSRPDEENISSYLQLLDKCLVHEAFTETQKKRLLSWKQQVQKLFRSFPRKTLLDISGYRQQRNRGFGQSNSLPTASSVGSGMGRRNPRQYQIASRNVPSARLGLLGTSGFVSSNQRHTAANPTIMKQGRQNLWFANPGGSNSMPSRTHSSVQKTRSLPVHTSPQNMLMFQQPEFQLPVTEPDINNRLESLCLSMTEHALGDGVDRTSTI

Annotated regions:
phrase: EEGSGMKDVPAWLKSLRLHKYAALFSQMTYEEMMALTECQLEAQNVTKGARHKIVISIQKLKE
type: DOMAIN
name: SAM
description: Sterile alpha motif domain

phrase: GMKDVPAWLKSLRLHKYAALFSQMTYEEMMALTECQLEAQNVTKGARHKIVISIQKL
type: DOMAIN
name: SAM
description: Sterile alpha motif domain

phrase: EEGSGMKDVPAWLKSLRLHKYAALFSQMTYEEMMALTECQLEAQNVTKGARHKIVISIQKLK
type: DOMAIN
name: Smaug_SAM
description: Protein Smaug, SAM domain
Protein sequence:
MSVISANPWLMLLAIFVINVAYVTCLTVRTILTLKGYRYVAAAVSFIEVLIYIIGLGLVMANLDKFQNIIAYALGFSVGIIVGMKIEEKLALGYSVVNVTTANYELDLPTQLRNLGYGVTHFPAYGRDGERLVMQILTPRRFELKLMDTIKQIDEKAFVIAYEARTLHGGFWVKGVRSKKLKAYDTDEI

Annotated regions:
phrase: TVRTILTLKGYRYVAAAVSFIEVLIYIIGLGLVMANLDKFQNIIAYALGFSVGIIVG
type: DOMAIN
name: DUF5698
description: Domain of unknown function DUF5698

phrase: YGVTHFPAYGRDGERLVMQILTPRRFELKLMDTIKQIDEKAFVIAYEARTLH
type: DOMAIN
name: DUF2179
description: Domain of unknown function DUF2179
Protein sequence:
MKYLSIFLLATFALAGDAPISTDSKGSPSLIAKFEKTSKSNIEGTIKFTPANNGTVSVSVDLKGLPSDIGPFPYHVHEKPVPASKNCSATENHFNPYNGTVRAATPAAHEVGDLAGKHGNIMGESYKTEYDDSYISLNEKSRSYIGGLSIVIHANNGTRLNCANITLLDEGHGNANTTMSNSSSSSSQSAVNTSSSMASTAPQGNGAERAVVNGLLAAGVVGVIAALI

Annotated regions:
phrase: MKYLSIFLLATFALAGDAPISTDSKGSPSLIAKFEKTSKSNIEGTIKFTPANNGTVSVSVDLKGLPSDIGPFPYH
type: REPEAT
name: Filamin/ABP280_repeat-like
description: Filamin/ABP280 repeat-like

phrase: EGTIKFTPANNGTVSVSVDLKGLPSDIGPFPYHVHEKPVPASKNCSATENHFNPYNGTVRAATPAAHEVGDLAGKHGNIMGESYKTEYDDSYISLNEKSRSYIGGLSIVIHANN
type: DOMAIN
name: SOD_Cu_Zn_dom
description: Superoxide dismutase, copper/zinc binding domain
Protein sequence:
MTSPDTQTSSLYAKREPVFPKRVSGKFRSLKWWIMGVTLGIYYIAPWLRWDRGPNLPDQAILVDLANRRFFFFMIEIWPHEFYFVAGLLIMAGLGLFLFTSAAGRVWCGYACPQTVWTDLFILVERWVEGDRNARIRLLRQRWDLEKTRKYLTKWTLWLLIGLATGGAWVFYFTDAPTLLVDLLTGNAHPVAYITMATLTATTFAFGGFAREQICIYACPWPRIQAAMMDEETITVAYREWRGEPRGKLKKGEPLSPDQGDCIDCMACVNVCPMGIDIRDGQQLACITCALCIDACDEVMDKIGKPRGLIGYLALTDERAEREGRSPRSAWRHVFRLRTLIYTALWSGVGLALIVALFLRSPIDINVTPLRNPLYVTLSDGSIRNTYDVRLRNKQGEARDYQISVTSEADLALSLEGHPATVVTVPANETMTQRVYIIAGKGTPAAEAERTDLRLWVEDLAAGQRVHHDTIFNGRGN

Annotated regions:
phrase: LIVALFLRSPIDINVTPLRNPLYVTLSDGSIRNTYDVRLRNKQGEARDYQISVTSEADLALSLEGHPATVVTVPANETMTQRVYIIAGKGTPAAEAERTDLRLWVEDLAAGQRVHHDTIFN
type: DOMAIN
name: FixG_C
description: FixG, C-terminal immunoglobulin-like domain

phrase: CIDCMACVNVC
type: CONSERVED_SITE
name: 4Fe4S_Fe_S_CS
description: 4Fe-4S ferredoxin, iron-sulphur binding, conserved site

phrase: LLIMAGLGLFLFTSAAGRVWCGYACPQTVWTDLF
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: AREQICIYACPWPRIQAAMMDEETITVAYREWRGEPRGKLKKGEPLSPDQGDCIDCMACVNVCPMGIDIRDGQQLACITCALCIDACDEVMDKIGKPRGLIG
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: EPLSPDQGDCIDCMACVNVCPMGIDIRD
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain
Protein sequence:
MTLKLIWDKFYVSIIFVITCLVLGIVLMCTVLGNSNNYSEVNINEGDSLWAIADEYASKSDMPKADFVAWVEKENNLTEGHVKAGDSVVIPVHETKLQNSDSTIQLANQ

Annotated regions:
phrase: NEGDSLWAIADEYASKSDMPKADFVAWVEKENNLTEGHVKAGDSVVI
type: DOMAIN
name: LysM_dom
description: LysM domain

phrase: SEVNINEGDSLWAIADEYASKSDMPKADFVAWVEKENNLTEGHVKAGDSVV
type: DOMAIN
name: LysM_dom
description: LysM domain
Protein sequence:
MDLPGPIHEILVLFGGFVLLLGGLGVVLLTNPIYSAFSLGLVLVCISLFYFLLNSYFVAVAQLLIYVGAINVLIIFAVMFVNGSEWSKDKNYWTIGDGFTLLLCITIPFSLMTTIPDTSWYGILWTTRSNQIVEQGLINNVQQIGIHLATDFYLPFELISLILLVSLIGAITMARQ

Annotated regions:
Protein sequence:
MCVEMKNKTNTTIPSQPQIPIQPSILPTQQTISPIPQIIPPTQPTLPKLQLDPILGSNGIPIANQEWSGTEYVRTNDPTKFIVITKTLDPKIARFLPTFKKPVITDIINKTSNSTLDMNKIITTNNFNVENAKALANFGNSCYFGTSMQLLFVMFHVRNFIVKNSNFTETGISIDLKNAYDSIKNLFITMNTAPKNDPIKSFPDYPNVKKQIMKEPDPVQMLEEDAEEFITQFMSDLDPKARNLALIKGNEYIYDVSNAQLNRQQSFSNIFNLIPLDIIKSNPTDTLENILSKTYTMVELREGVNTIQNPITSDYEFTYFVNQPTILPEYFLVRLNMVDPTSTNKLRHNIQINTTLVLTINGQTTTYFALAIIVHRGNSIRTGHYTCLVFDNQTGSQFQYIFYDDSLSSLVSIPTNSKIIPSNLYLKNITDSAYIILYGDITKLR

Annotated regions:
phrase: KALANFGNSCYFGTSMQLLFVMFHVRNFIVKNSNFTETGISIDLKNAYDSIKNLFITMNTAPKNDPIKSFPDYPNVKKQIMKEPDPVQMLEEDAEEFITQFMSDLDPKARNLALIKGNEYIYDVSNAQLNRQQSFSNIFNLIPLDIIKSNPTDTLENILSKTYTMVELREGVNTIQNPITSDYEFTYFVNQPTILPEYFLVRLNMVDPTSTNKLRHNIQINTTLVLTINGQTTTYFALAIIVHRGNSIRTGHYTCLVFDNQTGSQFQYIFYDDSLSSLVSIPTNSKIIPSNLYLKNITDSAYIILYGD
type: DOMAIN
name: USP_dom
description: Ubiquitin specific protease domain

phrase: LANFGNSCYFGTSMQLLFVMFHVRNFIVKNSNFTETGISIDLKNAYDSIKNLFITMNTAPKNDPIKSFPDYPNVKKQIMKEPDPVQMLEEDAEEFITQFMSDLDPKARNLALIKGNEYIYDVSNAQLNRQQSFSNIFNLIPLDIIKSNPTDTLENILSKTYTMVELREGVNTIQNPITSDYEFTYFVNQPTILPEYFLVRLNMVDPTSTNKLRHNIQINTTLVLTINGQTTTYFALAIIVHRGNSIRTGHYTCLVFDNQTGSQFQYIFYDDSLSSLVSIPTNSKIIPSNLYLKNITDSAYIIL
type: DOMAIN
name: Peptidase_C19_UCH
description: Peptidase C19, ubiquitin carboxyl-terminal hydrolase
Protein sequence:
MAFLPSWVCVLVGSFSASLAGTSNLSETEPPLWKESPGQLSDYRVENSMYIINPWVYLERMGMYKIILNQTARYFAKFAPDNEQNILWGLPLQYGWQYRTGRLADPTRRTNCGYESGDHMCISVDSWWADLNYFLSSLPFLAAVDSGVMGISSDQVRLLPPPKNERKFCYDVSSCRSSFPETMNKWNTFYQYLQSPFSKFDDLLKYLWAAHTSTLADNIKSFEDRYDYYSKAEAHFERSWVLAVDHLAAVLFPTTLIRSYKFQKGMPPRILLNTDVAPFISDFTAFQNVVLVLLNMLDNVDKSIGYLCTEKSNVYRDHSESSSRSYGNNS

Annotated regions:
Protein sequence:
MAILGLGTDIVEIARIESVIARSGERLARRVLSDNEWEIWKTHHQPVRFLAKRFAVKEAAAKAFGTGIRNGLAFNQFEVFNDELGKPRLRLWGEALKLAEKLGVVNMHVTLADERHYACATVIIES

Annotated regions:
phrase: GLGTDIVEIARIESVIARSGERLARRVLSDNEWEIWKTHHQPVRFLAKRFAVKEAAAKAFGTGIRNGLAFNQFEVFNDELGKPRLRLWGEALKLAEKLGVVNMHVTLADERHYACA
type: DOMAIN
name: 4-PPantetheinyl_Trfase_dom
description: 4'-phosphopantetheinyl transferase domain

phrase: ILGLGTDIVEIARIESVIARSGERLARRVLSDNEWEIWKTHHQPVRFLAKRFAVKEAAAKAFGTGIRNGLAFNQFEVFNDELGKPRLRLWGEALKLAEKLGVVNMHVTLADERHYACATVIIE
type: DOMAIN
name: Ppantetheine-prot_Trfase_dom
description: Phosphopantetheine-protein transferase domain
Protein sequence:
MIAYIHGKLLEATDKSCIILTPGGVGYELFLTLSAISTLPESGSDVTFYVHSVIREDAFDLYGFPCFDDREVFRTLISVDRLGPKKALAILSQFGPKDLQDLVFREDVKTLSIVPGIGPKSARQILWSLKDKMETLKSATVRSGACPVEGDRSEFLDALSGLRNLGYGDDEVRDFLKDIFDEEPDLDAGGAIRVALKKISQNK

Annotated regions:
phrase: RTLISVDRLGPKKALAILS
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: KTLSIVPGIGPKSARQILW
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: MIAYIHGKLLEATDKSCIILTPGGVGYELFLTLSAISTLPESGSDVTFYVHSVIREDAFDLY
type: DOMAIN
name: DNA_helicase_Holl-junc_RuvA_I
description: DNA helicase, Holliday junction RuvA type, domain I, bacterial

phrase: DALSGLRNLGYGDDEVRDFLKDIFDEEPDLDAGGAIRVAL
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal
Protein sequence:
MACSIVQFCSFQDLQSARDFLFPHLREETPGALKRDPSKTSSWEDDSWGAWEETEPREPEEEGNTSKTQKNSWLQECVLSLSPTSDLMVIAREQKAAFLVRKWKHGDKGKEEMQFAVGWSGSVSAEEGEYVTSALCIPLASQKRSSTGRPDWTCIVVGFTSGYVRFYTEGVLLLAQLLNEDKVLQLKCRTYEIPRHPGVTEQNEELSILYPAAIVTIDGFSLFQSLRACRNQVAKAAASGNENIQPPPLAYKKWGLQDIDTIIDHASVGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSSPFTGFFYALEGSTQPLLSHVALAVASKLTSALFSAASGWLGWKSKHEEDTVQKQKPKMEPATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQVGWIQIVEDLHERVPEKGGFSPFGNTQGPSRVAQFLVIYAPRRGILEVWNTQQGPRVGAFNVGKHCRLLYPGYKIMGLNNVTSQSWQPQTYQICLVDPVSASVKAVNVPFHLALSDKKSERAKDLHLVKKLSALLRAKSPRPDSFETEIKELILDIKYPATKKQALESILASDRLSFSCLRNVTQTLMDTLKNQELESVDEGLLQFCASKLKLLHLYESVSQLNTLDFHSDTPFSDNDLAVLLRLDDKELLKLRALLEKYKQENTKATVRFSEDADRVLPVKTFLEYLEYEKDALSIRKIGEEECVALGSFFFWKCLHGKSSTEEMCHSLESAGLSPQQLLSLLLSVWLSKEKDILDKPQSVCCLHTMLSLLSKMKVAIDETWDSQSVSPWWQQMRMACIQSENSGAALLSAHVGHSVAAQMSSGATDKKFSQMELDADAEALTDSWEALSLDTEYWKLLLRQLEDCLILQTLLHSKLSPPAAKAPSLQSEPLPRLSVKKLLEGGKGGIADSVAKWIFKQDLSPELLKCANKERDVENPDEPREDLLHLAYEQFPCSLELDVLHAHCCWEYVVQWNKDPEEARFLVRSIEHLKQILNPHVQNGIALMMWNTFLVKRFSAATYLMDKVGKSPKDRLCRRDVGMSDTALTSFLGSCLELLQTSLEADISRDEVQVPVLDTEDAWLSVEGPISIVELALEQKPIHYPLVEHHSVLCSILYASMRFSLKSVKPLALFDSKGKNAFFKDLTSIQLLPSGEMDPNFISVRQQFLLKVVSAAVQAQHSKDKDPSAEAANTHWKDLNWPGLAVDLAHHLQVSDDVIRRHYVGELYSHGADLLGEEAIFQVQDKEVLASQLLVLTGQRLAHALFHTQTKEGMELLARLPPTLCTWLKAMNPQDLQNTGVPIAATAKLVHKVMELLPEKHGQYSLALHLIDAVEAMATL

Annotated regions:
phrase: WLQECVLSLSPTSDLMVIAREQKAAFLVRKWKHGDKGKEEMQFAVGWSGSVSAEEGEYVTSALCIPLASQKRSSTGRPDWTCIVVGFTSGYVRFYTEGVLLLAQLLNEDKVLQLKCRTYEIPRHPGVTEQNEELSILYPAAIVTIDGFSLFQSLRACRNQVAKAAASGNENIQPPPLAYKKWGLQDIDTIIDHASVGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSSPFTGFFYALEGSTQPLLSHVALAVASKLTSALFSAASGWLGWKSKHEEDTVQKQKPKMEPATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQVGWIQIVEDLHERVPEKGGFSPFGNTQGPSRVAQFLVIYAPRRGILEVWNTQQGPRVGAFNVGKHCRL
type: DOMAIN
name: RAB3GAP_N
description: Rab3-GAP regulatory subunit, N-terminal

phrase: QLLSLLLSVWLSKEKDILDKPQSVCCLHTMLSLLSKMKVAIDETWDSQSVSPWWQQMRMACIQSENSGAALLSAHVGHSVAAQMSSGATDKKFSQMELDADAEALTDSWEALSLDTEYWKLLLRQLEDCLILQTLLHSKLSPPAAKAPSLQSEPLPRLSVKKLLEGGKGGIADSVAKWIFKQDLSPELLKCANKERDVENPDEPREDLLHLAYEQFPCSLELDVLHAHCCWEYVVQWNKDPEEARFLVRSIEHLKQILNPHVQNGIALMMWNTFLVKRFSAATYLMDKVGKSPKDRLCRRDVGMSDTALTSFLGSCLELLQTSLEADISRDEVQVPVLDTEDAWLSVEGPISIVELALEQKPIHYPLVEHHSVLCSILYASMRFSLKSVKPLALFDSKGKNAFFKDLTSIQLLPSGEMDPNFISVRQQFLLKVVSAAVQAQHSKDKDPSAEAANTHWKDLNWPGLAVDLAHHLQVSDDVIRRHYVGELYSHGADLLGEEAIFQVQDKEVLASQLLVLTGQRLAHALFHTQTKEGMELLARLPPTLCTWLKAMNPQDLQNTGVPIAATAKLVHKVMELL
type: DOMAIN
name: RAB3GAP2_C
description: Rab3GAP regulatory subunit, C-terminal
Protein sequence:
MLQPKRTKFRKQFKGSIKGLAKGGSDLNFGTYGLKAIEPERITARQIEAARRAMTRHMKRQGRVWIRIFPDVPVTAKPIEVRMGKGKGSVDRWAAKVKPGRVMFEIDGVNDDVAREALRLAAMKLPIKTRVVVREDW

Annotated regions:
phrase: KRQGRVWIRIF
type: CONSERVED_SITE
name: Ribosomal_uL16_CS
description: Large ribosomal subunit protein uL16, conserved site

phrase: GSDLNFGTYGLKAIEPERITARQIEAARRAMTRHMKRQGRVWIRIFPDVPVTAKPIEVRMGKGKGSVDRWAAKVKPGRVMFEIDGVNDDVAREALRLAAMKLPIKTRV
type: DOMAIN
name: Ribosomal_uL16_dom
description: Large ribosomal subunit protein uL16 domain

phrase: RMGKGKGSVDR
type: CONSERVED_SITE
name: Ribosomal_uL16_CS
description: Large ribosomal subunit protein uL16, conserved site
Protein sequence:
MKLAYWMYTGPAHIGTLRIASSFKNVHAIMHAPLGDDYFNVMRSMLERERNYTPVTTSVVDRNVLARGSQEKVIDNILRKDKEEQPDLIVLTPTCTSSILQEDLQNFVEQASLNSMADVLLADVNHYRINELQACDKTLEQIVRFYIEKNRASLTLEKVKTLLPSVNLIGISSLGFHNNHDTRELKKLFELYEIILNCSLPQGTTVKTLINLPKAWLNILPYRELGLLTSKYLNKEFGLLSLVILPMGNINLNRFLKKLLFSLKLENNTITKVINIKLLKLLNLNWIKKEAIKSKLKRKKAIIFGSSNHVATLTKLLSKEIGLEIILCGTYCKSESKWFSEQVQNYCNKILITEDHTMISNEISKLKPDVIFGTQMERHIGKRLGIPCGVISSPIHIQNFPLSYKPMVGYEGVKTIMDLLFNSLNLKDRKNSFTLFNEII

Annotated regions:
phrase: AHIGTLRIASSFKNVHAIMHAPLGDDYFNVMRSMLERERNYTPVTTSVVDRNVLARGSQEKVIDNILRKDKEEQPDLIVLTPTCTSSILQEDLQNFVEQASLNSMADVLLADVNHYRINELQACDKTLEQIVRFYIEKNRASLTLEKVKTLLPSVNLIGISSLGFHNNHDTRELKKLFELYEIILNCSLPQGTTVKTLINLPKAWLNILPYRELGLLTSKYLNKEFGLLSLVILPMGNINLNRFLKKLLFSLKLENNTITKVINIKLLKLLNLNWIKKEAIKSKLKRKKAIIFGSSNHVATLTKLLSKEIGLEIILCGTYCKSESKWFSEQVQNYCNKILITEDHTMISNEISKLKPDVIFGTQMERHIGKRLGIPCGVISSPIHIQNFPLSYKPMVGYEGVKTIMDLLFNS
type: DOMAIN
name: Nase/OxRdtase_comp1
description: Nitrogenase/oxidoreductase, component 1
Protein sequence:
MSSLHKFKAYFGMVPLDDYEDEYLDEPEPARRPARPARDSGRDPYLDRDDRDFAEPAFSKAAYAPGRRDDLDDDFDRYDGPRHSSRVEPVAVRSARPSASGAVRGSTRGALAVDTRSERVESRRGPLFDEGGPLSKITTLRPRDYGEARTIGERFRDGTPVIMDLVEMSNADAKRLVDFAAGLAFALRGSFDKVATKVFLLSPADIDVSAEERRRIAETGFYSQK

Annotated regions:
Protein sequence:
MKKITPKAMCAWIPKREDETHKGDYGRVLIVAGNKQFGGAAIMAAEACVKSGAGLTTVASDSVNRPALQTRIPECMFIDYENITSLSEQISQFDTILIGPGLGLDAYAEEIFRLVLQKSTEHQQVIIDGDGITIYAKGENPHPAAKLTFTPHAGEWERLKVLAPDAVTPTDVALAIDATIVLKGHRTKVYSGESAWQNMYGTPAMATGGMGDTLAGTICGLMAQTEKPITGTLAAVFLHSYIGEILAKKRYVVLPTEIAEELPTYLKIFSETDEHA

Annotated regions:
phrase: GGMGDTLAGT
type: CONSERVED_SITE
name: Carbohydrate_kinase_pred_CS
description: Carbohydrate kinase, predicted, conserved site

phrase: TPKAMCAWIPKREDETHKGDYGRVLIVAGNKQFGGAAIMAAEACVKSGAGLTTVASDSVNRPALQTRIPECMFIDYENITSLSEQISQFDTILIGPGLGLDAYAEEIFRLVLQKSTEHQQVIIDGDGITIYAKGENPHPAAKLTFTPHAGEWERLKVLAPDAVTPTDVALAIDATIVLKGHRTKVYSGESAWQNMYGTPAMATGGMGDTLAGTICGLMAQTEKPITGTLAAVFLHSYIGEILAKKRYVVLPTEIAEELPTYLKIFS
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: TPKAMCAWIPKREDETHKGDYGRVLIVAGNKQFGGAAIMAAEACVKSGAGLTTVASDSVNRPALQTRIPECMFIDYENITSLSEQISQFDTILIGPGLGLDAYAEEIFRLVLQKSTEHQQVIIDGDGITIYAKGENPHPAAKLTFTPHAGEWERLKVLAPDAVTPTDVALAIDATIVLKGHRTKVYSGESAWQNMYGTPAMATGGMGDTLAGTICGLMAQTEKPITGTLAAVFLHSYIGEILAKKRYVVLPTEIAEELPTYLKI
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: ETHKGDYGRVLIVAGNKQFGGAAIMAAEACVKSGAGLTTVASDSVNRPALQTRIPECMFIDYENITSLSEQISQFDTILIGPGLGLDAYAEEIFRLVLQKSTEHQQVIIDGDGITIYAKGENPHPAAKLTFTPHAGEWERLKVLAPDAVTPTDVALAIDATIVLKGHRTKVYSGESAWQNMYGTPAMATGGMGDTLAGTICGLMAQTEKPITGTLAAVFLHSYIGEILAKKRYVVLPTEIAEEL
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: VLIVAGNKQFGGAAIMAAEACVKSGAGLTTVASDSVNRPALQTRIPECMFIDYENITSLSEQISQFDTILIGPGLGLDAYAEEIFRLVLQKSTEHQQVIIDGDGITIYAKGENPHPAAKLTFTPHAGEWERLKVLAPDAVTPTDVALAIDATIVLKGHRTKVYSGESAWQNMYGTPAMATGGMGDTLAGTICGLMAQTEKPITGTLAAVFLHSYIGEILAKKRYVVLPTEIAEEL
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase

phrase: AMCAWIPKREDETHKGDYGRVLIVAGNKQFGGAAIMAAEACVKSGAGLTTVASDSVNRPALQTRIPECMFIDYENITSLSEQISQFDTILIGPGLGLDAYAEEIFRLVLQKSTEHQQVIIDGDGITIYAKGENPHPAAKLTFTPHAGEWERLKVLAPDAVTPTDVALAIDATIVLKGHRTKVYSGESAWQNMYGTPAMATGGMGDTLAGTICGLMAQTEKPITGTLAAVFLHSYIGEILAKKRYVVLPTEIAEELPTY
type: DOMAIN
name: CARKD
description: ATP/ADP-dependent (S)-NAD(P)H-hydrate dehydratase
Protein sequence:
MTVVLFATEYDTPNIVVNMLSETPTEHHLFPLMIKYKPSNRIEFVLQTQRCPDSTRVRPVFICDARRLSLSEYVSTNTPLPARVICAGIDADATRELYEHLFDRKKDETGHDEENGSAARHLFSNLTSTLKCLVHYNRSAILRYLNNTFLSPTFPSWFLSTYGTHEGTLILTMSYYLFERTYSTIQTTRDYTKCFTADPGRNLFTYINMRDFMATMNGSRFRKQTVLFAVFAKARNARDRCELEYVDAKINAFREESRLAADSCVYYVYLAYRTALCREKFLQYCEHTAYDKNLPDDQQCAAEENYLGRSLDAELISIMNTYFSVEGYFGSYIHVDRAKLSPPHSYRGYDWNTEADTMVGYSSTATNLAISLRKLNSTCESLFSPLPPTLMGLLKLCASDRYVPRAEKSRKRTSGGREKEDETRVCRRNYLLNDTSRPIGPMPVFRVEMPEKRHVFCAVSAENWTRRLLPKDLMKNLPSEYVSDECLTDAVWLREDIAALCEVGEQLYRTRHEMFNENLPVFNFVGDVDLKLREDLQGLSRQEVFDLCRALRRTLIGAWRHLFPEVDPDSHPVFFFKSACPQNAAGAADEAMLYGGGGYDEDDDPRPEHAAAMVDYGDAVRRPPFCVCRRKLGLRVIIPFPPRTAAIGAQTLKRLAGILDHTLCLDRDLVCKLNAISHPGECFDTGIYSHGRSIRMPLMYKLDEASGLILHSRLNPIFIVPAGYRDRPAEFVLQQLCPQNLTHHGRPPQRDGSADQLTEVVLHITDRACADSDGNFLQSRARRAMSSGRLPLGPLLRAHLSLESGQSAPSLPTLVGRGGGGEGGASSDYEEERAVGSDEEEDDDDVENLQAFARRIAWPALLRHTRNHYREEVQQQLEAATVFTAVGRTCVAVKRGLYGRARDFSCLARETYTRQETVQVFLDIRGDQRRNVWATLWSRCFTRRCNSNAKQTHLSLKISLPSQY

Annotated regions:
Protein sequence:
MAVQTLDDLLNAGVEGRAVLVRSDLNVPLDGDRITDPGRIIASAPTLKALAEAGAKVIVTAHLGRPKGEPDPQYSLAPVAVKLAEVLGRNVQLAGDVVGQDALARAEGLTDGDVLLLENIRFDPRETSKDEAERTKLAKALVELVGDDGAFVSDGFGVVHRAQASVYEVAKLLPHYAGKLVEAEIKVLGKLTEEPERPYAVVLGGSKVSDKLAVIEALAPKVDTLVIGGGMYYTFLAAQGVSVGNSLCEESMIDTCKALLEQYADVIHIPQDVVIADSFSADAESKIVSVLEIPDGWMGLDIGPQSVRRFAAILTSAKTVFWNGPMGVFEFEKFAAGTKGVAEAIIEATGKGAYSVVGGGDSAAAVRQLGLPEDGFSHISTGGGASLEYLEGKELPGIAVLEG

Annotated regions:
Protein sequence:
MKRIALFLATNLAVMIVFSIVLNIVYAVTGIQQGSLSGLLVMAVLFGFGGSLISLMMSKSMALRSVGGEVIEQPRNETEHWLLETVSRQAQQVGIGMPTVAIYDSPDMNAFATGAKRDDSLVAVSTGLLHSMTRDEAEAVLAHEVSHIANGDMITMTLMQGVVNTFVIFLSRMIANAVSGFTSSDEEGEGEGGSFMTYFIVSTILELAFGFLASFLTMWFSRHREFHADAGAAQLVGKQKMIAALERLRMGQESQLEGSMMAFGINGKKSLTELLMSHPPLEKRIDALRQM

Annotated regions:
phrase: TEHWLLETVSRQAQQVGIGMPTVAIYDSPDMNAFATGAKRDDSLVAVSTGLLHSMTRDEAEAVLAHEVSHIANGDMITMTLMQGVVNTFVIFLSRMIANAVSGFTSSDEEGEGEGGSFMTYFIVSTILELAFGFLASFLTMWFSRHREFHADAGAAQLVGKQKMIAALERLRMGQESQLEGSMMAFGINGKKSLTELLMSHPPLEKRIDALR
type: DOMAIN
name: Peptidase_M48
description: Peptidase M48
Protein sequence:
MNKRTLLFVSLIGIAFVGCQIFFGYNEFRSCKNLAEKQRKISEQTLAAVESVGLSVASWDTDVNGEEHKNNYAVRVGDKLFLLHNGEAAQSVYSSGESWSFVDHKCGFDNIHLALYRQQGSSFNPTNTGKVFLPTNHEGLPVLVVEFRNNKEPLVFLGEYAQGRISNKDSTIFGTALVFWRSGSDYIPLGLYDSREEKLVSLDLPITRAVIFGNDQDSAKSSDTANHYVLFNDYMQIIVSEESGSIEGINLPFASTNNKSIVNEIGFDRDLASEKSPEALFPGLSSKLPDGQQAKNSIGGYYPLLRRGLLSDSKKLLPLEYHALNVVSGRELATPVALRYRVLSYTPHSIQLESLDRSVQKVYKLPENPEEKPYVFETAITLTKETEDVWVTSGVPEVEIMSNASAPTIKYRVIKKNKGSLDKVKLPKVKEPLAVRRGVYPQWILNSNGYFGIILTPLSEIASGYGSLYISGSTAPTRLSAISPKNQLYPVSKYPGYETLLPLPKDAGTHRFLVYAGPLAEPTLKVLDKTITQEKGENPEYLDSISFRGVFAFITAPFAALLFIIMKFFKLVTGSWGISIILLTVFLKLLLYPLNAWSIRSMRRMQILSPYIQQIQQKYKNEPKRAQMEIMGLYKTNKVNPITGCLPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWQTSIWFIGNEFHLLPILLGIVMFLQQKVTSLHKKGPVTDQQKQQQVMGNMMAILFTAMFYNFPSGLNIYWLSSMILGVVQQWITNKILDSKHLKNEVVLNNKKHR

Annotated regions:
phrase: WGISIILLTVFLKLLLYPLNAWSIRSMRRMQILSPYIQQIQQKYKNEPKRAQMEIMGLYKTNKVNPITGCLPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWQTSIWFIGNEFHLLPILLGIVMFLQQKVTSLHKKGPVTDQQKQQQVMGNMMAILFTAMFYNFPSGLNIYWLSSMILGVVQQWITN
type: DOMAIN
name: YidC/Oxa/ALB_C
description: Membrane insertase YidC/Oxa/ALB, C-terminal

phrase: YPLNAWSIRSMRRMQILSPYIQQIQQKYKNEPKRAQMEIMGLYKTNKVNPITGCLPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWQTSIWFIGNEFHLLPILLGIVMFLQQKVTSLHKKGPVTDQQKQQQVMGNMMAILFTAMFYNFPSGLNIYWLSSMILGVVQQWITN
type: DOMAIN
name: YidC_ALB_C
description: Membrane insertase YidC/ALB, C-terminal

phrase: SWGISIILLTVFLKLLLYPLNAWSIRSMRRMQILSPYIQQIQQKYKNEPKRAQMEIMGLYKTNKVNPITGCLPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWQTSIWFIGNEFHLLPILLGIVMFLQQKVTSLHKKGPVTDQQKQQQVMGNMMAILFTAMFYNFPSGLNIYWLSSMILGVVQQWITN
type: DOMAIN
name: YidC/Oxa/ALB_C
description: Membrane insertase YidC/Oxa/ALB, C-terminal
Protein sequence:
MIKLTAQQIFDKLLDEEKILSANGQIRFFLGDVDIIVKQKDVVGNIIQEWLGGWLRKREIEFDVSTNTQMPPDFFLNKKDRSRELLEVKAFNRNACPGFDIADFKMYSDESFISPISGCRLFNIGYDMDDNGNVTIKDLWLKKVWQITRSMDGWAINFKSKKAWCIKSARVFGTA

Annotated regions:
Protein sequence:
MESCPSVKNILVLDSEGKRVAVKYYSDDWPSLSSKQAFEKSVFAKTQKTSARTEAEIVMFDSYFVVYKFIQDLHFFVTGGDEENELILASVLQGFSEAIDYLLRNKVHRRAALENLDLIFLCLDEVVDGGIVLETDAKAILEKVSGHGLEGSGSLTEQKLSSALATAREHFARSIFS

Annotated regions:
phrase: VKNILVLDSEGKRVAVKYYSDDWPSLSSKQAFEKSVFAKTQKTSARTEAEIVMFDSYFVVYKFIQDLHFFVTGGDEENELILASVLQGFSEAIDYLLRNKVHRRAALENLDLIFLCLDEVVDGGIVLETDAKAILEKV
type: DOMAIN
name: AP_mu_sigma_su
description: AP complex, mu/sigma subunit