nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MAPRKNAKGGGGNSSSSGSGSGSGSGSPSTGSSGSSSSPGARREAKHGGHKNGRRGGISGGSFFTWFMVIALLGVWTSVAVVWFDLVDYEEVLGKLGVYDADGDGDFDVDDAKVLLGLKERSPSERTFPPEEEAETHAELEEQAPEGADIQNVEDEVKEQIQSLLQESVHTDHDLEADGLAGEPQPEVEDFLTVTDSDDRFEDLEPGTVHEEIEDTYHVEDTASQNHPNDMEEMTNEQENSDPSEAVTDAGVLLPHAEEVRHQDYDEPVYEPSEHEGVAISDNTIDDSSIISEEINVASVEEQQDTPPVKKKKPKLLNKFDKTIKAELDAAEKLRKRGKIEEAVNAFEELVRKYPQSPRARYGKAQCEDDLAEKQRSNEVLRRAIETYQEAADLPDAPTDLVKLSLKRRSERQQFLGHMRGSLLTLQRLVQLFPSDTTLKNDLGVGYLLLGDNDSAKKVYEEVLNVTPNDGFAKVHYGFILKAQNKISESIPYLKEGIESGDPGTDDGRFYFHLGDAMQRVGNKEAYKWYELGHKRGHFASVWQRSLYNVNGLKAQPWWTPRETGYTELVKSLERNWKLIRDEGLMVMDKAKGLFLPEDENLREKGDWSQFTLWQQGRKNENACKGAPKTCALLEKFSETTGCRRGQIKYSIMHPGTHVWPHTGPTNCRLRMHLGLVIPKEGCKIRCANETRTWEEGKVLIFDDSFEHEVWQDASSFRLIFIVDVWHPELTPQQRRSLPAI

Annotated regions:
phrase: YLLLGDNDSAKKVYEEVLNVTPN
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: ERNWKLIRDEGLMVMDKAKGLFLPEDENLREKGDWSQFTLWQQGRKNENACKGAPKTCALLEKFSETTGCRRGQIKYSIMHPGTHVWPHTGPTNCRLRMHLGLVIPKEGCKIRCANETRTWEEGKVLIFDDSFEHEVWQDASSFRLIFIVDVWH
type: DOMAIN
name: Asp/Arg/Pro-Hydrxlase
description: Aspartyl/asparaginy/proline hydroxylase

phrase: NGRRGGISGGSFFTWFMVIALLGVWTSVAVVWFDLVDYEEVLGKLGVYDADGDGDFDVDDAKVLL
type: DOMAIN
name: Asp-B-hydro/Triadin_dom
description: Aspartyl beta-hydroxylase/Triadin domain

phrase: IKAELDAAEKLRKRGKIEEAVNAFEELVRKYPQ
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: TTLKNDLGVGYLLLGDNDSAKKVYEEVLNVTPN
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: TTLKNDLGVGYLLLGDNDSAKKVYEEVLNVTPN
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat
Protein sequence:
MIGKLKGVIDEIAEDHAVIDVHGVGYVAFCSARTLGNLGGVGEAAILFIETYVREDMIRLYGFANQLEREWFRLLQNVQGVGAKVALAVLGTLSPSELANAIALRDIAMVSRAPGVGKKVAERIVTELKNKAPAFAGDASGTIGLKQELGAGAAPAPVADAVSALSNLGYSRDQAANAVAAALKEAGENADSAKLIRLGLKELSR

Annotated regions:
phrase: PVADAVSALSNLGYSRDQAANAVAAALKEAGENADSAKLIRLGLKEL
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal

phrase: MIGKLKGVIDEIAEDHAVIDVHGVGYVAFCSARTLGNLGGVGEAAILFIETYVREDMIRLY
type: DOMAIN
name: DNA_helicase_Holl-junc_RuvA_I
description: DNA helicase, Holliday junction RuvA type, domain I, bacterial

phrase: RLLQNVQGVGAKVALAVLG
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: AMVSRAPGVGKKVAERIVT
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1
Protein sequence:
MDFLHKATLLEQTLNMEIGEQVKKLATYTFSNFIRCPEVQQAIASGEIRNDMPHLRFVYIFYLFKKIQDFIGDTEVFGIYEKVMGVERANSAKLVDVVQACTEMRPHIQAQICEHIERLTRGQGENVLWEVLRDGVISSSKLLKFVKQQTPDSKIFNPIPIQKNHYVASPVAFGVRNETVVKKLISELVVEEGIGCVTEFGFMLSPNDGIFGVSLDMCTNASMSDHNTVEFTSTTTIYEIKCRYKYLFSKCDYDPIYQAYQKLYNSPGRQELIDFIQSIQKPTVEYVSRGRLPTQNDYLLSFDRSWDFGPPKRKRKLTSGHKITEQCMKYNCYTESKVIILTDPALTSGKIEVKGSFFVDIYINPRHAYYHQCMLQYKIVTNYVQLTKGDSCKHTHPGVFLVSAFFRKRNSADFPKTYIKTERSFVDASVEIPVLLIITPVFVPHGPLVDTLEQAIKFWQVAVKEEFNHWPWAPTSLSAVGDVTP

Annotated regions:
Protein sequence:
MSGARTAHALVFLLGCSALALGVCSASLEHGEAEYYVAAVYEHRSVLSPNPLELSSRQQALELMKQNLDVYEQQVMAAAQKGAHIIVFPEDGIHGFNFTRTSIYPFLDLMPSPRLVSWNPCLEPFRFNDTEVLQRLSCMAIKGKMFLVANLGTKQPCLGSDPGCPQDGRYQFNTNVAFSDNGTLVGRYRKHNLYFEEAFDSPADVDLTTFDTPFAGKFGMFTCFDILFFDPAVRLLRDFEVKHIAYPTAWMNQLPLLAAIEIQKAFATAFGVTVLAANIHHPTLGMTGSGIHTPLKSFWYHNMDDPEGHLIIARVATNPQGLVGTENTTSEMDPSHRKFLKVLSGDPYCEKDAQEVRCDEAAKWNLNAPPTFHSEMMYDNFTLVPVWGKEGHLQVCSNSLCCHLLFERPALSKELYALGVFDGLHTVHGTYYVQACALVKCGGAGFETCGQEISEAEGLFDFHLWGNFSTLYVFPLFLTSGMTLDTPDQLGWESDHYFLRKRGLSSGLVTAALYGRLYERN

Annotated regions:
phrase: KQNLDVYEQQVMAAAQKGAHIIVFPEDGIHGFNFTRTSIYPFLDLMPSPRLVSWNPCLEPFRFNDTEVLQRLSCMAIKGKMFLVANLGTKQPCLGSDPGCPQDGRYQFNTNVAFSDNGTLVGRYRKHNLYFEEAFDSPADVDLTTFDTPFAGKFGMFTCFDILFFDPAV
type: DOMAIN
name: C-N_Hydrolase
description: Carbon-nitrogen hydrolase

phrase: NPLELSSRQQALELMKQNLDVYEQQVMAAAQKGAHIIVFPEDGIHGFNFTRTSIYPFLDLMPSPRLVSWNPCLEPFRFNDTEVLQRLSCMAIKGKMFLVANLGTKQPCLGSDPGCPQDGRYQFNTNVAFSDNGTLVGRYRKHNLYFEEAFDSPADVDLTTFDTPFAGKFGMFTCFDILFFDPAVRLLRDFEVKHIAYPTAWMNQLPLLAAIEIQKAFATAFGVTVLAANIHHPTLGMTGSGIHTPLKSFWYHNMDDPEGHLIIARVATNPQGLVGTENT
type: DOMAIN
name: C-N_Hydrolase
description: Carbon-nitrogen hydrolase

phrase: FHSEMMYDNFTLVPVWGKEGHLQVCSNSLCCHLLFERPALSKELYALGVFDGLHTVHGTYYVQACALVKCGGAGFETCGQEISEAEGLFDFHLWGNFSTLYVFPLFLTSGMTLDTPDQLGWESDHYFLRKRGLSSGLVTAALYGRLYE
type: DOMAIN
name: Vanin_C
description: Vanin, C-terminal
Protein sequence:
MSQSDILYSQAKQLIPGGVNSPVRAFNGVGGTPLFIKHADGAYLYDVDGKAYIDYVGSWGPMVLGHNHSAIRNAVIKAAEQGLSFGAPTAAEVEMAQLVTELVPSMDMVRMVNSGTEATMSAIRLARGYTHRDKIIKFEGCYHGHADCLLVKAGSGALTIGQPNSPGVPVDFVKHTLTCTYNDLSSVREAFEQYPQEIACIIVEPVAGNMNCVPPQPEFLPGLRALCDEFGALLIIDEVMTGFRVALSGAQSYYDVEPDITCLGKIIGGGMPVGAFGGRYEVMEKLAPIGPVYQAGTLSGNPIAMAAGLACLKEVSQPGVHQRLTELTDNLAAGLTKSAKAANIPLVVNHVGGMFGIFFTDAETVTCYQDVMNCDIERFKHFFHLMLDEGVYLAPSAFEAGFMSIAHTDEDIQRTVNAAARCFAKLK

Annotated regions:
phrase: LIIDEVMTGFRVALSGAQSYYDVEPDITCLGKIIGG
type: CONSERVED_SITE
name: Aminotrans_3_PPA_site
description: Aminotransferases class-III pyridoxal-phosphate attachment site
Protein sequence:
MTSHDQSYRAGEAKGRTEEKTNQMIGNIEDKAQAAKEKAQQAAQTAKDKTSQTAQAAKEKTQQTAQAAKDKTQQTTQATKEKAQDTTGRAKEKGSEMGQSTKETAQSGKDNSAGFLQQTGEKAKGMAQGATDAVKQTFGMTNDDQDKDHFPTNRH

Annotated regions:
Protein sequence:
MAEYKNYTLNFGPVHPAAHGVLRLILELDGETVVRADPHVGLLHRGTEKLAEFKPYNQSIGYMDRLDYVSMMCNEHAYVMAIEKLLELEVPERAQYIRVMFAEMTRILNHLLWVAACGIDLGAMTVFLYAFRVREDLFDCYEAVSGARMHAAYFRPGGVARDLPTQMPQYKQTRFTSKRKTKKINANRQGSMLDFLDSFVVDFDKSLDEIDTLLTDNRLWKQRTVDIGVVTAERAVELGFTGPMLRGSGVAWDLRKSQPYEVYDKLDFDIPVGANGDCYDRYLVRMAEMRESNKLIKQCVDWLRANQGPVLSDNHKVAPPKRNAMKNNMEELIHHFKLFSEGYCTPEGEVYVGTEHPKGEFGVYIKSDGANKPYRLKMKAPGFTHISAMDELLSGHMLADTPAIISTIDVVFGDVDR

Annotated regions:
phrase: LHRGTEKLAEF
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_49kDa_CS
description: NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site

phrase: DLGAMTVFLYAFRVREDLFDCYEAVSGARMHAAYFRPGGVARDLPTQMPQYKQTRFTSKRKTKKINANRQGSMLDFLDSFVVDFDKSLDEIDTLLTDNRLWKQRTVDIGVVTAERAVELGFTGPMLRGSGVAWDLRKSQPYEVYDKLDFDIPVGANGDCYDRYLVRMAEMRESNKLIKQCVDWLRANQGPVLSDNHKVAPPKRNAMKNNMEELIHHFKLFSEGYCTPEGEVYVGTEHPKGEFGVYIKSDGANKPYRLKMKAPGFTHISAMDELLSGHMLADTPAIISTIDVVFGDVD
type: DOMAIN
name: NADH_Q_OxRdtase_suD
description: NADH-quinone oxidoreductase, subunit D
Protein sequence:
REKIGVMFGCFSYGTRVQLADGSTEKIGKIVNQKMDVEVMSYDPVTDQIVPRKVVNWFNNGPAEQFLQFTVEKSGGNGRSQFAATPNHLIRTPAGWTEAGDLIAGDRVLAAERHLLSDQQFQVILGSLMGGGNLSPNLHDRNGVRFRMGHGARQADYLEWKTALLGNIGHSVRENDQGARFVDFTPLPELGELRRAVYLGDGKKFLSEDYLKALTPLALAVWYMDDGSFTVRSKGVQQRTQGGSGRIEICVEAMAEGTRERLRDYLRDTHGLDVRLRSAGSGKSMLTFSTEATAKFQELVAPHMAPSMEHKLLPRFRGLGTVEPRFVEPAQRLVPARVLDVQVKPRTRSMNRFDIEVEGNHNYFVDGVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGSDAVGNRTRVKVVKNKVSPP

Annotated regions:
phrase: FQVILGSLMGGGNLSPNLHDRNGVRFRMGHGARQADYLEWKTALLGNIGHSVRENDQGARFVDFTPLPELGELRRAVYLGDGKKFLSEDYLKALTPLALAVWYMDDGSFTVRSKGVQQRTQGGSGRIEICVEAMAEGTRERLRDYLRDTHGLDVRLRSAGSGKSMLTFSTEATAK
type: DOMAIN
name: LAGLIDADG_dom
description: Homing endonuclease, LAGLIDADG domain

phrase: CFSYGTRVQLADGSTEKIGKIVNQKMDVEVMSYDPVTDQIVPRKVVNWFNNGPAEQFLQFTVEKSGGNGRSQFAATPNHLIR
type: PTM
name: Intein_N
description: Intein N-terminal splicing region

phrase: FGCFSYGTRVQLADGSTEKIGKIVNQKMDVEVMSYDPVTDQIVPRKVVNWFNNGPAEQFLQFTVEKSGGNGRSQFAATPNHLIRTPAGWTEAGDLIAGDRVLAA
type: DOMAIN
name: Hint_dom_N
description: Hint domain N-terminal

phrase: GVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGSDAVGNRTRVKVVKNKVSP
type: DOMAIN
name: RecA_monomer-monomer_interface
description: DNA recombination and repair protein RecA, monomer-monomer interface

phrase: ALKFYASV
type: CONSERVED_SITE
name: DNA_recomb/repair_RecA_CS
description: DNA recombination/repair protein RecA, conserved site

phrase: CFSYGTRVQLADGSTEKIGKIVNQKMDVEVMSYDPVTDQIVPRKVVNWFNNGPAEQFLQFTVEKSGGNGRSQFAATPNHLIR
type: PTM
name: Intein_N
description: Intein N-terminal splicing region

phrase: NRFDIEVEGNHNYFVDGVMVHN
type: CONSERVED_SITE
name: Intein_C
description: Intein C-terminal splicing region

phrase: AQRLVPARVLDVQVKPRTRSMNRFDIEVEGNHNYFVDGVMVHNSPETT
type: DOMAIN
name: Hint_dom_C
description: Hint domain C-terminal

phrase: GVMVHNSPETTTGGKALKFYASVRMDVRRIETLKDGSDAVGNRTRVKVVKNKVSP
type: DOMAIN
name: RecA-like_N
description: RecA-like, N-terminal

phrase: FDIEVEGNHNYFVDGVMVHN
type: CONSERVED_SITE
name: Intein_C
description: Intein C-terminal splicing region
Protein sequence:
MKNAYYIGLMSGTSMDGVDAVLVDFSGPQPQLICSHTEAIPSHLLKGLQRLCLPGADEINRLGRLDRNVGQLFALAVNNLLAKCNIAKEDIIAIGSHGQTVRHMPNLEVGFTLQIGDPNTIATETGIDVIADFRRKDIALGGQGAPLVPAFHQQTFAEIDKKRIILNIGGIANVTYLPGTSEHVLGFDTGPGNTLIDAWIQHVKSEPFDKNGEWAASGKTNPDLLAQLLSHPYFSLAYPKSTGRELFNQAWLEQQLSPFNHLDEEDIQSTLLDMTCHSIARDVIKLSPEGELFVCGGGAFNTQLMQRLAALLPGYKLDTTSALGVDPKWAEGIAFAWLAMRNHLGLPANLPAVTGASREAVLGGRFSAK

Annotated regions:
Protein sequence:
MADTPVSAPVVPEVTERKSKRGTKAAAVKVPKEKKKVIAAKKPKSKGTSSHPSFFEMISDAISTLKERTGSSQYAINKFVEDKHKQLPSNFRKLLLFHLKKLVASGKLVKVKNSFKLPSARAAPAPALAKKPTIPKPKVAAKPKTAKIGAKPKAKAKVAAKTKATTKTVAKKIPAAKPKAKTAGKPKTVAAKPAKVAKTAAVASPGKKKAVPVKKVKTVKSPAGKRTRK

Annotated regions:
phrase: HPSFFEMISDAISTLKERTGSSQYAINKFVEDKHKQLPSNFRKLLLFHLKKLVASGKLVKVKNSFK
type: DOMAIN
name: Histone_H1/H5_H15
description: Linker histone H1/H5, domain H15

phrase: TSSHPSFFEMISDAISTLKERTGSSQYAINKFVEDKHKQLPSNFRKLLLFHLKKLVASGKLVKVKN
type: DOMAIN
name: Histone_H1/H5_H15
description: Linker histone H1/H5, domain H15

phrase: SHPSFFEMISDAISTLKERTGSSQYAINKFVEDKHKQLPSNFRKLLLFHLKKLVASGKLVKVKNSFKLP
type: DOMAIN
name: Histone_H1/H5_H15
description: Linker histone H1/H5, domain H15

phrase: TSSHPSFFEMISDAISTLKERTGSSQYAINKFVEDKHKQLPSNFRKLLLFHLKKLVASGKLVKVKN
type: DOMAIN
name: Histone_H1/H5_H15
description: Linker histone H1/H5, domain H15
Protein sequence:
MFTGDRGLNALLESGVLQQEVPLANYTTWRVGGPAQWLAEPNNAEQCLELLQWAKAEGLTTRVIGAGSNLLIADAGLPGLTLCLRRLQGSQLDAESGQVKALAGEPLPTLARRAARLGLHGLEWAVGIPGTVGGAAAMNAGAQGGSTADCLTAVEVIDQSLTDTVKTTTLLSNTDLAYDYRHSLLQGSDQMVVAAQFQLEPGHDAKELMRKTSGNLSHRTTTQPYQWPSCGSVFRNPEPEKAGQLIEGLGLKGRRIGGAEVSSVHANFIVNVGDATADDIRALIDLVQNEVERMNGITLHPEVKRLGFQTTD

Annotated regions:
phrase: LAEPNNAEQCLELLQWAKAEGLTTRVIGAGSNLLIADAGLPGLTLCLRRLQGSQLDAESGQVKALAGEPLPTLARRAARLGLHGLEWAVGIPGTVGGAAAMNAGAQGGSTADCLTAVEVID
type: DOMAIN
name: Oxid_FAD_bind_N
description: FAD linked oxidase, N-terminal

phrase: KTSGNLSHRTTTQPYQWPSCGSVFRNPEPEKAGQLIEGLGLKGRRIGGAEVSSVHANFIVNVGDATADDIRALIDLVQNEVERMNGITLHPEVK
type: DOMAIN
name: MurB_C
description: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal

phrase: RVGGPAQWLAEPNNAEQCLELLQWAKAEGLTTRVIGAGSNLLIADAGLPGLTLCLRRLQGSQLDAESGQVKALAGEPLPTLARRAARLGLHGLEWAVGIPGTVGGAAAMNAGAQGGSTADCLTAVEVIDQSLTDTVKTTTLLSNTDLAYDYRHSLLQGSDQMVVAAQFQLEP
type: DOMAIN
name: FAD-bd_PCMH
description: FAD-binding domain, PCMH-type
Protein sequence:
MASITNILAPVENELDLLTKNLKKLVGSGHPILSAASEHLFSASGKRPRPAIVLLISKATMENEIITSRHRRLAEITEIIHTASLVHDDILDESDVRRGIPTVHSDFGTKIAILAGDFLFAQSSWYLANLESLEVVKLISKVITDFAEGEIRRGLNQFKVDLTLEEYLEKSFYKTASLLAASSKAAALLSHVDLTVANDLYNYGRHLGLAFQIVDDILDFTSSTEELGKPSCSDLKKGNLTAPVLFALEQNSELIPLIQRQFSEPKDFEYTLQIVEETKAIEKTRELAMEHAQVAIQCLENLPPSSSKEALKLITKYVLERLY

Annotated regions:
phrase: LGLAFQIVDDIL
type: CONSERVED_SITE
name: Polyprenyl_synt_CS
description: Polyprenyl synthetase, conserved site

phrase: LVHDDILDESDVRR
type: CONSERVED_SITE
name: Polyprenyl_synt_CS
description: Polyprenyl synthetase, conserved site
Protein sequence:
MTASQAPGELVFEAPKRGKAPRHLMDLTGPERKAAIVELGFPAFRADQISRQWLSRLNDDPQTWSDVPADVRDAVSGSLLPALLSPVRTVDCDQGTTVKSLWRLHDGALVETVLMRYPGRVTMCISSQAGCGMNCPFCATGQAGLTRNLSTAEIVEQALAGARALNRDEVAGGEGRVTNVVFMGMGEPLANYSSVIGAVRRLVSSAPEGLGMSARGVTISTVGLVPRIRQLATEGLPVTLALSLHAPDDELRNTLVPVNTKWPVDEVLDALWEYADVTHRRVSIEYALIKEINDQVWRAHRLADLLEGQLVHVNLIPLNPTPGSKWTASSPQDEAAFVATLKQRGIAVTVRDTRGREIDGACGQLAASPE

Annotated regions:
phrase: YPGRVTMCISSQAGCGMNCPFCATGQAGLTRNLSTAEIVEQALAGARALNRDEVAGGEGRVTNVVFMGMGEPLANYSSVIGAVRRLVSSAPEGLGMSARGVTISTVGLVPRIRQLATEGLPVTLALSLHAPDDELRNTLVPVNTKWPVDEVLDALWEYADVTHRRVSIEYALIKEINDQVWRAHRLADLLEGQLVHVNLIPLNPTPGSKWTASSPQDEAAFVATLKQRGIAVTVRDTRGR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SSQAGCGMNCPFCATGQAGLTRNLSTAEIVEQALAGARALNRDEVAGGEGRVTNVVFMGMGEPLANYSSVIGAVRRLVSSAPEGLGMSARGVTISTVGLVPRIRQLATEGLPVTLALSLHAPDDELRNTLVPVNTKWPVDEVLDALWEYADVTHRRVSIEYALIKEINDQVWR
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MSLPAKTLVQAAANSGLRAVSVRHSSQAPKVALLGAAGGIGQPLGLLLKQDPLVAHLALYDVVNTPGVAADLSHIDSNAKVTAHTGPKELYAAVENADVIVIPAGVPRKPGMTRDDLFNTNAGIVRDLAAVIAKASPKALIAIITNPVNSTVPIASEVLKKAGVYDPKRVFGVTTLDVVRSQAFVSELKGHDASKTVVPVVGGHAGITIIPLLSQVKPSTKFSEEEISKLTPRIQDAGTEVVNAKAGAGSATLSMALAGARFANALVRGIKGEKNVQCAYVASDAVKGVEYFSTPVELGPNGVEKILGVGKVSAYEQKLIDASVPELNKNIAKGVAFVKGN

Annotated regions:
phrase: TTLDVVRSQAFVSELKGHDASKTVVPVVGGHAGITIIPLLSQVKPSTKFSEEEISKLTPRIQDAGTEVVNAKAGAGSATLSMALAGARFANALVRGIKGEKNVQCAYVASDAVKGVEYFSTPVELGPNGVEKILGVGKVSAYEQKLIDASVPELNKNIAKGVAF
type: DOMAIN
name: Lactate/malate_DH_C
description: Lactate/malate dehydrogenase, C-terminal

phrase: KVALLGAAGGIGQPLGLLLKQDPLVAHLALYDVVNTPGVAADLSHIDSNAKVTAHTGPKELYAAVENADVIVIPAGVPRKPGMTRDDLFNTNAGIVRDLAAVIAKASPKALIAIITNPVNSTVPIASEVLKKAGVYDPKRVF
type: DOMAIN
name: Lactate/malate_DH_N
description: Lactate/malate dehydrogenase, N-terminal

phrase: VTTLDVVRSQAF
type: ACTIVE_SITE
name: Malate_DH_AS
description: Malate dehydrogenase, active site
Protein sequence:
MGYSYTEKKRIRKDFGKRSQVLNVPYLLTIQLDSFDKFIQRDPDGQQGLEAAFRSVFPIVSNNGSTELQYVSYKLGEPVFDVRECQIRGTTFAAPLRVKLRLVSYDKDAAPGTVKDIKEQDVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLFARIDRRRKLPATIILRALNYTTEEILDLFFDKVVFEIQGDKLLMELVPERLRGETATFDIEAEGKVYVERGRRITARHIKALEKDGVKKVEVPTEYIIGKVAAKDYVDLESGEVICAANTEISLELLAKLAQAGYTAIEALFTNDLDFGPYISETLRVDPSCDRLSALVEIYRMMRPGEPPTKEAAEGLFDNLFFSQERYDLSAVGRMKFNRSLGIDSETGSGVLSKEDIVSVMKKLIDIRNGRGEVDDIDHLGNRRIRSVGEMAENQFRIGLVRVERAVKERLSLGDLDAVTPQDLINAKPISAAVREFFGSSQLSQFMDQNNPLSEVTHKRRISALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYARTNDYGFLETPYRKVVNGQVTEEIEYLSAIEEGKYIIAQANANLDDDFRFTDTFVTARGEHGESGLYRPEEIHYMDVSTQQVVSVAAALIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMEKPIALDSGVAVVAKRGGTIQYVDASRIVVKVNEDETIPGEAGIDIYNLIKYTRSNQNTCINQ

Annotated regions:
phrase: RSPGVFFDSDKGKTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLFARIDRRRKLPATIILRALNYTTEEILD
type: DOMAIN
name: RNA_pol_Rpb2_2
description: RNA polymerase Rpb2, domain 2

phrase: SETLRVDPSCDRLSALVEIYRMMRPGEPPTKEAAEGLFDNLFFSQERYDLSAVGRMKFNRSLGIDSETGSGVLSKEDIVSVMKKLIDIRNGRGEVDDIDHLGNRRI
type: DOMAIN
name: RNA_pol_Rpb2_2
description: RNA polymerase Rpb2, domain 2

phrase: LLTIQLDSFDKFIQRDPDGQQGLEAAFRSVFPIVSNNGSTELQYVSYKLGEPVFDVRECQIRGTTFAAPLRVKLRLVSYDKDAAPGTVKDIKEQDVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLFARIDRRRKLPATIILRALNYTTEEILDLFFDKVVFEIQGDKLLMELVPERLRGETATFDIEAEGKVYVERGRRITARHIKALEKDGVKKVEVPTEYIIGKVAAKDYVDLESGEVICAANTEISLELLAKLAQAGYTAIEALFTNDLDFGPYISETLRVDPSCDRLSALVEIYRMMRPGEPPTKEAAEGLFDNLFFSQERYDLSAVGRMKFNRSLGIDSETGSGVLSKEDIVSVMKKLIDIRNGRGEVDDIDHLGNRRIRSVGEMAENQFRIGLVRVERAVKERLSLGDLDAVTPQDLINAKPI
type: DOMAIN
name: RNA_pol_bsu_protrusion
description: RNA polymerase, beta subunit, protrusion

phrase: QFMDQNNPLSEVTHKRRISALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYA
type: DOMAIN
name: RNA_pol_Rpb2_3
description: RNA polymerase Rpb2, domain 3

phrase: YRKVVNGQVTEEIEYLSAIEEGKYIIAQANANLDDDFRFTDTFVTARGEHGESGLYRPEEIHYMDV
type: DOMAIN
name: DNA-dir_RNA_pol_bsu_external_1
description: DNA-directed RNA polymerase, beta subunit, external 1 domain
Protein sequence:
MRNITNFLKTFLLWELLKGLKVTGKHFFTRKVTVQYPDEKTPISNRFRGLHALRRYENGEERCIACKLCEVVCPALAITINSTEREDGTRRTSSYEMDLFKCIFCGYCEESCPVDSIVETNILEYHFEERGENIMTKAKLLAIGDKYEAQIAADRLQDKDFR

Annotated regions:
phrase: CIFCGYCEESC
type: CONSERVED_SITE
name: 4Fe4S_Fe_S_CS
description: 4Fe-4S ferredoxin, iron-sulphur binding, conserved site

phrase: RCIACKLCEVVCPALAITINSTEREDGTRRTSSYEMDLFKCIFCGYCEESCPV
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: RRYENGEERCIACKLCEVVCPALAITINS
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: SSYEMDLFKCIFCGYCEESCPVDSIVETN
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain
Protein sequence:
MTKAIQKIGSRRNGRIASRKNGRRIPKGVIHVQASFNNTIVTVTDVRGQVVSWSSAGTCGFRGTRRGTPFAAQTAAANAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVRDVTPMPHNGCRPPKKRRV

Annotated regions:
phrase: LRAIRRSGILLSFVRDVTPMPH
type: CONSERVED_SITE
name: Ribosomal_uS11_CS
description: Small ribosomal subunit protein uS11, conserved site
Protein sequence:
MAHLLEKTRKITSILKRSEEQLQDELPYNAITRQLADIIHCNACIINSKGRLLGYFMRYKTNTDRVEQFFQTKIFPDDYVQGANMIYETEANLPVEHDMSIFPIESRDDFPDGLTTIAPIHVSGIRLGSLIIWRNDKKFEDEDLVLVEIASTVVGIQLLNFQREEDEKNIRRRTAVTMAVNTLSYSELRAVSAILGELNGNEGKLTASVIADRIGITRSVIVNALRKLESAGIIESRSLGMKGTYLKVLISDIFEEVKKRDY

Annotated regions:
phrase: AILGELNGNEGKLTASVIADRIGITRSVIVNALRKLESAGIIESRSLGMKGT
type: DOMAIN
name: ArsR-like_HTH
description: ArsR-like helix-turn-helix domain

phrase: HLLEKTRKITSILKRSEEQLQDELPYNAITRQLADIIHCNACIINSKGRLLGYFMRYKTNTDRVEQFFQTKIFPDDYVQGANMIYETEANLPVEHDMSIFPIESRDDFPDGLTTIAPIHVSGIRLGSLIIWRNDKKFEDEDLVLVEIASTVVGIQLLNFQREEDEKNIRRRTAVTMAVN
type: DOMAIN
name: Transc_reg_CodY_N
description: Global transcriptional regulator CodY, N-terminal

phrase: EGKLTASVIADRIGITRSVIVNALRKLESAGIIESRSLGMKGTYLKVLISDIFEEV
type: DOMAIN
name: GTP_trans_reg_CodY_C
description: Global transcriptional regulator CodY, C-terminal
Protein sequence:
MSGLSRIGVAIDSDLLDKFDSLIGQRGYTNRSEAFRDLIRDELVEKTWESPESQVVGTVTLVYDHHVRLLNEKLTGIQHDFHHSILSTLHVHLDHDNCLEVLVVRGRSADVRKVADVLISTKGVKHGRLTITTTGAEMK

Annotated regions:
phrase: VGTVTLVYDHHVRLLNEKLTGIQHDFHHSILSTLHVHLDHDNCLEVLVVRGRSADVRKVADVLISTKGVKHGRLTI
type: DOMAIN
name: TF_NikR_Ni-bd_C
description: Transcription factor, NikR, nickel binding C-terminal

phrase: RIGVAIDSDLLDKFDSLIGQRGYTNRSEAFRDLIRDE
type: DOMAIN
name: CopG
description: Ribbon-helix-helix protein, CopG
Protein sequence:
MPTCVALIVAGGRGERFGADLPKQYLHLAGRPVLRRSVEPFLHHPLVSGVRVVIDPRHRELYEQAVQGLDLPDPIQGGPTRQDSVRNGLEALVGHSPDLVLIHDAARPLVDAATITRVVEALAKHPGAIAAIPLADTLKRAEGGLSAGTVDRTALWRARTPQGFRFADILKAHRMAVGMNLTDDAAVAEQAGLPVALVPSNPENLKVTQSDDLARAERLFLSGLGDIRTGTGFDVHKFCEGDHVWLCGVKVPHTQRLEGHSDADVGLHALTDAILGCLGEGDIGTHFPPSDPQWKGADSAKFLRHAADLVARRGGVIAHVDVTILCERPKVGPHREAMVARMAEILGIAPSRVSVKATTTEGLGFTGRREGIAAQAAATVRLPFTE

Annotated regions:
phrase: IRTGTGFDVHKFCEGDHVWLCGVKVPHTQRLEGHSDADVGLHALTDAILGCLGEGDIGTHFPPSDPQWKGADSAKFLRHAADLVARRGGVIAHVDVTILCERPKVGPHREAMVARMAEILGIAPSRVSVKATTTEGLGFTGRREGIAAQAAAT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RTGTGFDVHKFCEGDHVWLCGVKVPHTQRLEGHSDADVGLHALTDAILGCLGEGDIGTHFPPSDPQWKGADSAKFLRHAADLVARRGGVIAHVDVTILCERPKVGPHREAMVARMAEILGIAPSRVSVKATTTEGLGFTGRREGIAAQAAAT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: VLIHDAA
type: CONSERVED_SITE
name: ISPD_synthase_CS
description: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site

phrase: SDADVGLHALTDAIL
type: CONSERVED_SITE
name: MECDP_synthase_CS
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site

phrase: IRTGTGFDVHKFCEGDHVWLCGVKVPHTQRLEGHSDADVGLHALTDAILGCLGEGDIGTHFPPSDPQWKGADSAKFLRHAADLVARRGGVIAHVDVTILCERPKVGPHREAMVARMAEILGIAPSRVSVKATTTEGLGFTGRREGIAAQAAATVR
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RTGTGFDVHKFCEGDHVWLCGVKVPHTQRLEGHSDADVGLHALTDAILGCLGEGDIGTHFPPSDPQWKGADSAKFLRHAADLVARRGGVIAHVDVTILCERPKVGPHREAMVARMAEILGIAPSRVSVKATTTEGLGFTGRREGIAAQAAAT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: AERLFLSGLGDIRTGTGFDVHKFCEGDHVWLCGVKVPHTQRLEGHSDADVGLHALTDAILGCLGEGDIGTHFPPSDPQWKGADSAKFLRHAADLVARRGGVIAHVDVTILCERPKVGPHREAMVARMAEILGIAPSRVSVKATTTEGLGFTGRREGIAAQAAAT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Protein sequence:
MAHTKTYNVAVVGASGAVGEEILRILEEIDFPLKRLIPLASSRSAGNTIEFQGNTITIKELTETVFTDESIDIALFSAGGSVSAKFAPCAASAGAVVIDNTSHFRMEDDIPLVVPEVNPEDIARWQQRGIIANPNCSTIQMVQALKPLDNAYDLIRVDVSTYQATSGAGKSAMEELVTQMQAFFAFKLDESEHQSFPHQIALNVIPQIDRFTENGYTKEEMKMVNETCKILHKEVELSATCVRVPTLRGHAESLTLTFDSQVTAHEARELLQKAPNIIIVDEITDNAYPMPATCVERNETFVGRIRNDIYRDNVLHLWVVADNLRVGAATNAVRIAQKWIEMEQEN

Annotated regions:
phrase: NVAVVGASGAVGEEILRILEEIDFPLKRLIPLASSRSAGNTIEFQGNTITIKELTETVFTDESIDIALFSAGGSVSAKFAPCAASAGAVVIDNTSHFRMEDDIPLVVPEVNPEDI
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: NVAVVGASGAVGEEILRILEEIDFPLKRLIPLASSRSAGNTIEFQGNTITIKELTETVFTDESIDIALFSAGGSVSAKFAPCAASAGAVVIDNTSHFRMEDDIPLVVPEVNPEDIAR
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: LSATCVRVPTLRGH
type: CONSERVED_SITE
name: Asp-semialdehyde_DH_CS
description: Aspartate-semialdehyde dehydrogenase, conserved site

phrase: LKPLDNAYDLIRVDVSTYQATSGAGKSAMEELVTQMQAFFAFKLDESEHQSFPHQIALNVIPQIDRFTENGYTKEEMKMVNETCKILHKEVELSATCVRVPTLRGHAESLTLTFDSQVTAHEARELLQKAPNIIIVDEITDNAYPMPATCVERNETFVGRIRNDIYRDNVLHLWVVADNL
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain
Protein sequence:
MTTIVSVRRHGKVVMGGDGQVSLGNTVMKGNAKKVRRLYHGQVLAGFAGATADAFTLFERFEGQLEKHQGHLVRAAVELAKEWRTDRSLSRLEAMLAVANKDASLIITGNGDVVEPEHGLIAMGSGGGYAQAAASALLKKTDLSAREIVETALGIAGDICVFTNHNQTIEEQDLAE

Annotated regions:
Protein sequence:
MARLERDGTNKSLESLMDSHKPGGTTTNLNQLRTQKSIPGYGLEFTNLSYSIIKKQKKDGVWINKETYLLHDISGQAIKGEIMAIMGPSGAGKSTFLDALAGRIAKGSLQGSVRIDGKPVTTSYMKMVSSYVMQDDQLFPMLTVFETFMFAAEVRLPPSISRDEKKKRVHELLNKLGLQSATHTYIGDEGRRGVSGGERRRVSIGIEIIHKPSLLFLDEPTSGLDSTSAYSVVEKIKDIAQGGSIVLMTIHQPSFRIQMLLDKITILARGRLIYMGRPDALHTHLSGFGRPVPDGENNIEYLLDVITEYDQATVGLDPLVQYQHDGHKPDPAAMTPVPKPPRTPYRRNTPASKHMISLRSQGFTAGTPQPDSSQFGLDDDDNDDDENFDNSLERRSVQTSRNIVTSGVYPRLASQFYQDFSAKDFSVWLYNGVVGTPRRPPSWTPARTPGWTPGKTPLSGPRSFVSNQHSASYQDPYYIQKTNTVVGQSMDYSATSYAPSYEEFEIEEVLDEPDLGPKYANPWLREVAVLSWRTVLNVIRTPELFASREIVLTVMALVLSTIFKNLGDTTFIDINRLLNFYIFAVCLVFFSSNDAVPSFIMERFIFIRETSHNAYRASSYVISSLIVYLPFFAVQGLTFAVITKLMLHLKSNLFNFWMILFASLITTNAYVMLVSALVPSYITGYAVVIATTALFFLTCGFFLKRTQIPAYWKWLHYISAIKYPFEGLLINEFKNNRGCYSGNKADLSPGPLGDVKPSKHHNASLPLN

Annotated regions:
phrase: KGEIMAIMGPSGAGKSTFLDALAGRIAKGSLQGSVRIDGKPVTTSYMKMVSSYVMQDDQLFPMLTVFETFMFAAEVRLPPSISRDEKKKRVHELLNKLGLQSATHTYIGDEGRRGVSGGERRRVSIGIEIIHKPSLLFLDEPTSGLDSTSAYSVVEKIKDIAQGGSIVLMTIHQPSFRIQMLLDKITILARGRLIYMGRP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LHDISGQAIKGEIMAIMGPSGAGKSTFLDALAGRIAKGSLQGSVRIDGKPVTTSYMKMVSSYVMQDDQLFPMLTVFETFMFAAEVRLPPSISRDEKKKRVHELLNKLGLQSATHTYIGDEGRRGVSGGERRRVSIGIEIIHKPSLLFLDEPT
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: EVAVLSWRTVLNVIRTPELFASREIVLTVMALVLSTIFKNLGDTTFIDINRLLNFYIFAVCLVFFSSNDAVPSFIMERFIFIRETSHNAYRASSYVISSLIVYLPFFAVQGLTFAVITKLMLHLKSNLFNFWMILFASLITTNAYVMLVSALVPSYITGYAVVIATTALFFLTCGFFLKRTQIPAYWKWLHYISAIKYPFEGLLINE
type: DOMAIN
name: ABC2_TM
description: ABC-2 type transporter, transmembrane domain

phrase: VSGGERRRVSIGIE
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: LEFTNLSYSIIKKQKKDGVWINKETYLLHDISGQAIKGEIMAIMGPSGAGKSTFLDALAGRIAKGSLQGSVRIDGKPVTTSYMKMVSSYVMQDDQLFPMLTVFETFMFAAEVRLPPSISRDEKKKRVHELLNKLGLQSATHTYIGDEGRRGVSGGERRRVSIGIEIIHKPSLLFLDEPTSGLDSTSAYSVVEKIKDIAQGGSIVLMTIHQPSFRIQMLLDKITILARGRLIYMGRPDALHTHLSGFGRPVP
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain