nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MLFINTDLQECLNALNLEFDEHKELVKLVKNNSFSGFASTVVFHLKGVNQKETAQQIAAWLLKHKKAHYRRVFVANNNFINFEISPQKYLDFLKTKPTFAPKPTKVLIEWVSANPTGELHLGHVRNAFFGHVLNNLMVFLGFQTVREYWVNDYGQQARVFGFSVYQALHLQQNIKVTPHPDGYEGELVDSIAKTITGIPLDKLSFEEFLQQPFLDQLLADCTAKVLEVIKQDLATIHIHFDSWKFESQVVKETDYKKLLTQFKDEAHYEKDGAIWLKTTLYGDDKDRVLVRQDNRPSYFGTDVAYHLDKAARGFDLLYDIWGSDHEGHIKRMHCVYEGLKIHQKCQLKITALQLVMLYKNKEIVRLSKRAGNVITIKQMLQMLSEDAARWFMLSQTNNSIIKIDLDTANLQNSSNPVYYVQYAYARMCSVLKVVDQAALAQVNDCSLLTHEKEIALLDQLVYFKSLLEKVQVSHELHLLTNYLYETATLFHSWYKACKINDPAQYNLTQQRLLLLQSLHHVFGQLLQILNITAPQQM

Annotated regions:
phrase: PTGELHLGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: KVLIEWVSANPTGELHLGHVRNAFFGHVLNNLMVFLGFQTVREYWVNDYGQQARVFGFSVYQALHLQQNIKVTPHPDGYEGELVDSIAKTITGIPLDKLSFEEFLQQPFLDQLLADCTAKVLEVIKQDLATIHIHFDSWKFESQVVKETDYKKLLTQFKDEAHYEKDGAIWLKTTLYGDDKDRVLVRQDNRPSYFGTDVAYHLDKAARGFDLLYDIWGSDHEGHIKRMHCVYEGLKIHQKCQLKITALQLVMLYKNKEIVRLSKRA
type: DOMAIN
name: ArgRS_core
description: Arginyl-tRNA synthetase, catalytic core domain

phrase: PKPTKVLIEWVSANPTGELHLGHVRNAFFGHVLNNLMVFLGFQTVREYWVNDYGQQARVFGFSVYQALHLQQNIKVTPHPDGYEGELVDSIAKTITGIPLDKLSFEEFLQQPFLDQLLADCTAKVLEVIKQDLATIHIHFDSWKFESQVVKETDYKKLLTQFKDEAHYEKDGAIWLKTTLYGDDKDRVLVRQDNRPSYFGTDVAYHLDKAARGFDLLYDIWGSDHEGHIKRMHCVYEGLKIHQKCQLKITALQLVMLYKNKEIVRLSKRAGNVITIKQMLQMLSEDAARWFML
type: DOMAIN
name: ArgRS_core
description: Arginyl-tRNA synthetase, catalytic core domain

phrase: VQYAYARMCSVLKVVDQAALAQVNDCSLLTHEKEIALLDQLVYFKSLLEKVQVSHELHLLTNYLYETATLFHSWYKACKINDPAQYNLTQQRLLLLQSLHHVFGQLLQILNITAPQQ
type: DOMAIN
name: DALR_anticod-bd
description: DALR anticodon binding

phrase: VQYAYARMCSVLKVVDQAALAQVNDCSLLTHEKEIALLDQLVYFKSLLEKVQVSHELHLLTNYLYETATLFHSWYKACKINDPAQYNLTQQRLLLLQSLHHVFGQLLQILNITAPQQ
type: DOMAIN
name: DALR_anticod-bd
description: DALR anticodon binding
Protein sequence:
MVEAVKVSELVKDLPSLRVVEGKEYLDQKLINTSDISRPGLELTGYFDFYPKNRIQLLGRTEISYSARLDHDLRERVFNKMATPETPCFIVSRGLPIPSEMLEAAEKEKIPVLSSNMATTHLSSVITQFLDEKLAPRKSIHGVLVEIYGMGVLIIGNSGVGKSETALDLVKRGHRLIADDRVDVYQKDDKTVVGEAPKILKHLMEIRGIGIIDVMNLFGAGAVKDSTEIQLIICLQNWDPKANYDRLGFNEKTREIFEVDVPQVTVPVKVGRNLAIIIEVAAMNFRAKKMGYDASQKFEQNLTELISDNSKKDEGDSRK

Annotated regions:
phrase: VKVSELVKDLPSLRVVEGKEYLDQKLINTSDISRPGLELTGYFDFYPKNRIQLLGRTEISYSARLDHDLRERVFNKMATPETPCFIVSRGLPIPSEMLEAAEKEKIPVLSSNMATTHLSSVITQF
type: DOMAIN
name: Hpr_kin/Pase_Hpr_N
description: HPr(Ser) kinase/phosphorylase, N-terminal

phrase: EKLAPRKSIHGVLVEIYGMGVLIIGNSGVGKSETALDLVKRGHRLIADDRVDVYQKDDKTVVGEAPKILKHLMEIRGIGIIDVMNLFGAGAVKDSTEIQLIICLQNWDPKANYDRLGFNEKTREIFEVDVPQVTVPVKVGRNLAIIIEVAAMNFRAKKMGYDASQKFEQ
type: DOMAIN
name: Hpr_kin/Pase_C
description: HPr kinase/phosphorylase, C-terminal

phrase: PRKSIHGVLVEIYGMGVLIIGNSGVGKSETALDLVKRGHRLIADDRVDVYQKDDKTVVGEAPKILKHLMEIRGIGIIDVMNLFGAGAVKDSTEIQLIICLQNWDPKANYDRLGFNEKTREIFEVDVPQVTVPVKVGRNLAIIIEVAAMN
type: DOMAIN
name: Hpr_kin/Pase_C
description: HPr kinase/phosphorylase, C-terminal
Protein sequence:
MSDDEHHFESSDAGASKTYPQQAGNIRKGGHIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEDIVPSSHNCDVPHVNRVDYQLIDISEDGFVSLLTDNGSTKDDLKLPTDEALLTQLKNGFEEGKDIVVSVMSAMGEEQMCALKEVGPK

Annotated regions:
phrase: HVNRVDYQLIDISEDGFVSLLTDNGSTKDDLKLPTDEALLTQLKNGFEEGKDIVVSVMSAMGEEQMCAL
type: DOMAIN
name: Transl_elong_IF5A_C
description: Translation elongation factor, IF5A C-terminal

phrase: SKTYPQQAGNIRKGGHIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEDIVPSS
type: DOMAIN
name: IF5A-like_N
description: Translation initiation factor 5A-like, N-terminal

phrase: HVNRVDYQLIDISEDGFVSLLTDNGSTKDDLKLPTDEALLTQLKNGFEEGKDIVVSVMSAMGEEQMCAL
type: DOMAIN
name: Transl_elong_IF5A_C
description: Translation elongation factor, IF5A C-terminal

phrase: TGKHGHA
type: PTM
name: Trans_elong_IF5A_hypusine_site
description: Translation elongation factor, IF5A, hypusine site
Protein sequence:
MKKIVLLRHGESAWNKENRFTGWTDVDLTEKGVAEAEKAGVTLREYGFNFDKAYTSYLKRAVKTLNCVLDKMNLDWIPVEKSWRLNEKHYGDLQGLNKAETAEKYGEEQVLIWRRSYDIAPNPLSESDLRNPRFDYRYHEVSDAELPRTESLKDTIDRIMPYWESDIFPALKDAHTLLVVAHGNSLRGIIKHLKHISDEDIIKLNLPTAVPYVFEFDENLNVANDYFLGNPEEIRKLMEAVANQGKKK

Annotated regions:
phrase: LLRHGESAW
type: ACTIVE_SITE
name: PG/BPGM_mutase_AS
description: Phosphoglycerate/bisphosphoglycerate mutase, active site
Protein sequence:
MDEKDILRNLREEEEEEEENQSEETKILISSLPWEIDYLGNKLFKYQGYWYYEDVLQSIPNIHSSFQPQETDIVVASFYKSGTTWLKALTFALVQRSKHSLEDHHHPLLSHNPHEIVPYLELDLYLNSSKPDLTKFLSSSSSSSSPRLFSTHMSLDALKLPLKKSPCKVVYVCRNVKDVLVSLWCFLNANKGVEWGDFSQNEKIIRAENYSFKAIFESFCNGVTLHGPFWDHAQSYWRGSLEDPKHFLFMRYEELKAEPRTQVKRLAEFLDCPFTKEEEDSGTVDKILELCSLSNLSSLEINKTGSLGGVDYKTYFRKGQVGDWKSYMTSEMVNKIDMIVEEKLKGSGLKF

Annotated regions:
phrase: TDIVVASFYKSGTTWLKALTFALVQRSKHSLEDHHHPLLSHNPHEIVPYLELDLYLNSSKPDLTKFLSSSSSSSSPRLFSTHMSLDALKLPLKKSPCKVVYVCRNVKDVLVSLWCFLNANKGVEWGDFSQNEKIIRAENYSFKAIFESFCNGVTLHGPFWDHAQSYWRGSLEDPKHFLFMRYEELKAEPRTQVKRLAEFLDCPFTKEEEDSGTVDKILELCSLSNLSSLEINKTGSLGGVDYKTYFRKGQVGDWKSYMTSEMVNKIDMIVEEKLKGS
type: DOMAIN
name: Sulfotransferase_dom
description: Sulfotransferase domain
Protein sequence:
MSIASVASVFKGEHAVGSTVTVRGWVRTRRDSKAGISFLAVYDGSCFNPIQGVVPNSLENYDNEVLKLTAGCSVIVTGEIVESPGAGQAYELQVTQVEVTGWVEDPDTYPMAAKRHSIEHLRELAHLRPRTNIIGAVARVRNCLSQAIHRFYHENGFVWVSTPLITASDCEGAGEMFRVSTLDMENLPRTSDGKVDYDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMVEPEVAFATLSDIANLAEGMLKYAFNAVLAERMDDLQFFAQHVDKTVIERLQSFVSSDFAQVDYTDAVEILQKCGREFEFPVSWGIDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDMRLEEMDLNKEDYWWYRDLRRYGTVPHAGFGLGFERLVSYVTGVSNIRDVIPFPRAPRTANF

Annotated regions:
phrase: AHLRPRTNIIGAVARVRNCLSQAIHRFYHENGFVWVSTPLITASDCEGAGEMFRVSTLDMENLPRTSDGKVDYDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMVEPEVAFATLSDIANLAEGMLKYAFNAVLAERMDDLQFFAQHVDKTVIERLQSFVSSDFAQVDYTDAVEILQKCGREFEFPVSWGIDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDMRLEEMDLNKEDYWWYRDLRRYGTVPHAGFGLGFERLVSYVTGVSNIRDVIPFP
type: DOMAIN
name: Aa-tRNA-synt_II
description: Aminoacyl-tRNA synthetase, class II (D/K/N)

phrase: RVRNCLSQAIHRFYHENGFVWVSTPLITASDCEGAGEMFRVSTLDMENLPRTSDGKVDYDKDFFGKEAFLTVSGQLNGETYACALSKIYTFGPTFRAENSNTSRHLAEFWMVEPEVAFATLSDIANLAEGMLKYAFNAVLAERMDDLQFFAQHVDKTVIERLQSFVSSDFAQVDYTDAVEILQKCGREFEFPVSWGIDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIGGSQREERLDVLDMRLEEMDLNKEDYWWYRDLRRYGTVPHAGFGLGFERLVSYVTGVSNIRDVI
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: VTVRGWVRTRRDSKAGISFLAVYDGSCFNPIQGVVPNSLENYDNEVLKLTAGCSVIVTGEIVESPGAGQAYELQVTQVE
type: DOMAIN
name: NA-bd_OB_tRNA
description: OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
Protein sequence:
MQVYLVGGAVRDHLLGIDIYDRDWVVVGATPEIMLSQGYTAVGKDFPVFLHPKTKEEHALARTERKSGAGYTGFECFFDQSVTLEEDLIRRDLTINAMAMDEDGNLYDPYGGQKDIDAKVLRHVSQAFVEDPLRVLRVARFAAKLAHLGFSVAEETMQLMRDMAESGELSTLTPERVWQEWHKSLSTSRPDVFLSVLRDCGALAVVLPEIDALFGVPQPEKWHPEIDTGIHTLMVAQQAAKLSDSLPVRFAAQVHDLGKGVTPESEWPSHKMHCHTGLKLIKKLCDRVRVPNEFRDLALMVCEQHSNIHRAAELKPQTIIKILNKFDVWRKAERLQDILICCQADHAGRKGLEDQPYPQAELFMRAYQAAASVDVQAIIKDGFKGPAIRDEQEKRRAEAVKVALGK

Annotated regions:
phrase: MQVYLVGGAVRDHLLGIDIYDRDWVVVGATPEIMLSQGYTAVGKDFPVFLHPKTKEEHALARTERKSGAGYTGFECFFDQSVTLEEDLIRRDLTINAMAMDEDGNLYDPYGGQKDID
type: DOMAIN
name: PolA_pol_head_dom
description: Poly A polymerase, head domain

phrase: VYLVGGAVRDHLLGIDIYDRDWVVVGATPEIMLSQGYTAVGKDFPVFLHPKTKEEHALARTERKSGAGYTGFECFFDQSVTLEEDLIRRDLTINAMAMDEDGNLYDPYGGQKDIDAKVL
type: DOMAIN
name: PolA_pol_head_dom
description: Poly A polymerase, head domain

phrase: TGIHTLMVAQQAAKLSDSLPVRFAAQVHDLGKGVTPESEWPSHKMHCHTGLKLIKKLCDRVRVPNEFRDLALMVCEQHSNIHRAAELKPQTIIKILNKFDV
type: DOMAIN
name: HD_domain
description: HD domain

phrase: GFSVAEETMQLMRDMAESGELSTLTPERVWQEWHKSLSTSRPDVFLSVLRDCGALAVVLPEID
type: DOMAIN
name: PolyA_RNA-bd
description: tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain

phrase: DTGIHTLMVAQQAAKLSDSLPVRFAAQVHDLGKGVTPESEWPSHKMHCHTGLKLIKKLCDRVRVPNEFRDLALMVCEQHSNIHRAAELKPQTIIKILNKFDVWRKAERLQDILICCQA
type: DOMAIN
name: HD/PDEase_dom
description: HD/PDEase domain

phrase: GIHTLMVAQQAAKLSDSLPVRFAAQVHDLGKGVTPESEWPSHKMHCHTGLKLIKKLCDRVRVPNEFRDLALMVCEQHSNIHRAAELKPQTIIKILNK
type: DOMAIN
name: HD_domain
description: HD domain
Protein sequence:
MRVKGILRNWQQWWIWGILGFWMALNCSGKENLWVTVYYGVPVWKEAKTTLFCASDAKGYEKEVHNIWATHACVPTDPNPHEMVMGNVTENFNMWKNDMVDQMHEDIISLWDESLRPCVKLTPLCVTLNCSNATSVNATYKGIRVNDSATYNDSIIGEMKNCSFNITTEIKDWRRKVYATFYKPDIVPLKKNGSNSSEYSEYILISCNTSVVTQACPKVNFDPIPIHYCAPAGYAILKCNNKTFNGTGPCHNVSTVQCTHGIKPVVSTQLLLNGSLAEEDIIISSENLTDNAKTIIVHLNESVRIVCTRPGNNTRQSIRIGPGQVFYATGDITGDIRQAHCNISKKTWTETLWNVTNKLKEHFNKSIYFANSSGGDPEITTHTFNCRGEFFYCNTTELFNYNASKLNDSTNIDEHDNITLQCRIKQIINMWQKVGRAMYAPPIAGNITCISNITGLLLLRDGGINRTNETFRPGGGDMRDNWRSELYKYKVVEIKPLGIAPTEAKRRVVERQKRAVGLGAMFLGFLGAAGSTMGAASIALTAQARQLLSGIVQQQNNLLQAIEAQQHLLQLTVWGIKQLQARVLAIERYLKDQQLLGLWGCSGKHICPTAVPWNSSWSNKSLAEIWNNMTWMQWDKEVNSYTSIIYNLLEESQNQQEQNEKDLLALDSWNSLWNWFDISKWLWYIKIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQTLNPNPRELDRLGRIEEEGGEQDRDRSIRLVNGFLALFWDDLRNLCL

Annotated regions:
phrase: LWVTVYYGVPVWKEAKTTLFCASDAKGYEKEVHNIWATHACVPTDPNPHEMVMGNVTENFNMWKNDMVDQMHEDIISLWDESLRPCVKLTPLCVTLNCSNATSVNATYKGIRVNDSATYNDSIIGEMKNCSFNITTEIKDWRRKVYATFYKPDIVPLKKNGSNSSEYSEYILISCNTSVVTQACPKVNFDPIPIHYCAPAGYAILKCNNKTFNGTGPCHNVSTVQCTHGIKPVVSTQLLLNGSLAEEDIIISSENLTDNAKTIIVHLNESVRIVCTRPGNNTRQSIRIGPGQVFYATGDITGDIRQAHCNISKKTWTETLWNVTNKLKEHFNKSIYFANSSGGDPEITTHTFNCRGEFFYCNTTELFNYNASKLNDSTNIDEHDNITLQCRIKQIINMWQKVGRAMYAPPIAGNITCISNITGLLLLRDGGINRTNETFRPGGGDMRDNWRSELYKYKVVEIKPLGIAPTEAKRRVVERQK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: AQARQLLSGIVQQQNNLLQAIEAQQHLLQLTVWGIKQLQARVLAIERYLKDQQLLGLWGCSGKHICPTAVPWNSSWSNKSLAEIWNNMTWMQWDKEVNSYTSIIYNLLEESQNQQEQNEKDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASIALTAQARQLLSGIVQQQNNLLQAIEAQQHLLQLTVWGIKQLQARVLAIERYLKDQQLLGLWGCSGKHICPTAVPWNSSWSNKSLAEIWNNMTWMQWDKEVNSYTSIIYNLLEESQNQQEQNEKDLLALDSWNSLWNWFDISKWLWYIKIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MEENIESVEEWVSKLDIETTKDIHVPKLLFDQVIGQDQAGEIVKKAALQRRHVILIGEPGTGKSMLAQSMVDFLPKSELEDILVFPNPEDPNKPKIKTVPAGKGKEIVRQYQIKAEREKRDRSRSIMFVIFSVVLLGIIAAIVLRSITLIFFAIMAAAFLYMAMAFNPVIRNEKAMVPKLLVSHSSTDKPPFVDSTGAHSGALLGDVRHDPFQSGGLETPAHERVEAGNIHKAHKGVLFIDEINLLRPEDQQAILTALQEKKYPISGQSERSAGAMVQTEPVPCDFVLVAAGNYDAIRNMHPALRSRIRGYGYEVVVNDYMDDNDENRKKLVQFIAQEVEKDKKIPHFDKSAIVEIIKEAQKRSGRRNKLTLRLRELGGLVRVAGDIAVSQKRNIVTASDVIAAKALSKPLEQQIADKSIEIKKIYKTFRTEGSVVGMVNGLAVVGADTGMAEYTGVVLPIVAEVTPAEHKGAGNIIATGKLGDIAKEAVLNVSAVFKKITGKDISNMDIHIQFVGTYEGVEGDSASVSIATAVISAIENIPVDQSVAMTGSLSVRGDVLPVGGVTAKVEAAIEAGMAKVIVPELNYNDIILDAEHINRIQIIPARTIEDVLKVALVNSPEKDKLFDRIASIINNAKIIKPQKPVASTRAGQNVA

Annotated regions:
phrase: FDQVIGQDQAGEIVKKAALQRRHVILIGEPGTGKSMLAQSMVDFLPKSELEDI
type: DOMAIN
name: Mg_chelatse_chII-like_cat_dom
description: Magnesium chelatase ChlI-like, catalytic domain

phrase: GSVVGMVNGLAVVGADTGMAEYTGVVLPIVAEVTPAEHKGAGNIIATGKLGDIAKEAVLNVSAVFKKITGKDISNMDIHIQFVGTYEGVEGDSASVSIATAVISAIENIPVDQSVAMTGSLSVRGDVLPVGGVTAKVEAAIEAGMAKVIVPELNYNDIILDAEHINRIQIIPARTIEDVLKVALV
type: DOMAIN
name: Lon_proteolytic
description: Peptidase S16, Lon proteolytic domain

phrase: VNGLAVVGADTGMAEYTGVVLPIVAEVTPAEHKGAGNIIATGKLGDIAKEAVLNVSAVFKKITGKDISNMDIHIQFVGTYEGVEGDSASVSIATAVISAIENIPVDQSVAMTGSLSVRGDVLPVGGVTAKVEAAIEAGMAKVIVPELNYNDIILDAEHINRIQIIPARTIEDVLKVAL
type: DOMAIN
name: Lon_proteolytic
description: Peptidase S16, Lon proteolytic domain

phrase: HFDKSAIVEIIKEAQKRSGRRNKLTLRLRELGGLVRVAGDIAVSQKRNIVTASDVIA
type: DOMAIN
name: LonB_AAA-LID
description: LonB, AAA+ ATPase LID domain, archaeal-type

phrase: AAIVLRSITLIFFAIMAAAFLYMAMAFNPVIRNEKAMVPKLLVSHSSTDKPPFVDSTGAHSGALLGDVRHDPFQSGGLETPAHERVEAGNIHKAHKGVLFIDEINLLRPEDQQAILTALQEKKYPISGQSERSAGAMVQTEPVPCDFVLVAAGNYDAIRNMHPALRSRI
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: QRRHVILIGEPGTGKSMLAQSMVDFLPKSELEDILVFPNPEDPNKPKIKTVPAGKGKEIVRQYQIKAEREKRDRSRSIMFVIFSVVLLGIIAAIVLRSITLIFFAIMAAAFLYMAMAFNPVIRNEKAMVPKLLVSHSSTDKPPFVDSTGAHSGALLGDVRHDPFQSGGLETPAHERVEAGNIHKAHKGVLFIDEINLLRPEDQQAILTALQEKKYPISGQSERSAGAMVQTEPVPCDFVLVAAGNYDAIRNMHPALRSRIRGYGY
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: TPAHERVEAGNIHKAHKGVLFIDEINLLRPEDQQAILTALQEKKYPISGQS
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain
Protein sequence:
MAGRAQGARWMARRVIGLTGGIATGKSTVGRLLAGWGIPVIDADLLAREAVAPGSAALAEIVQHYGSTMLTNAGALDRSALARIIFSDPQERRWVESRIHPSVRAAMQAAVEREPGTICLMIPLLFEAGMTDLVTEIWVVSCKPERQHARLKERDGLDDQAIAARIASQWPLTEKVRHADVVLDNDGDFAHLKIQVERALDQASI

Annotated regions:
Protein sequence:
MGENDPPAAEAPFSFRSLFGLDDLKISPVAPDGDAVAAQILSLLPLKFFPIIVIGIIALILALAIGLGIHFDCSGKYRCHSSFKCIELTARCDGVSDCKNAEDEYRCVRVSGQRAALQVFTAAAWRTMCSDDWKSHYAKIACAQLGFPSYVSSDHLRVDALEEQFQGDFVSINHLLSDDKVTALHHSVYMREGCTSGHVVTLKCSACGTRTGYSPRIVGGNMSSLTQWPWQVSLQFQGYHLCGGSIITPLWIVTAAHCVYDLYHPKSWTVQVGLVSLMDSPVPSHLVEKIIYHSKYKPKRLGNDIALMKLSEPLTFDETIQPICLPNSEENFPDGKLCWTSGWGATEDGGDASPVLNHAAVPLISNKICNHRDVYGGIISPSMLCAGYLKGGVDSCQGDSGGPLVCQERRLWKLVGATSFGIGCAEVNKPGVYTRITSFLDWIHEQLERDLKT

Annotated regions:
phrase: IVGGNMSSLTQWPWQVSLQFQGYHLCGGSIITPLWIVTAAHCVYDLYHPKSWTVQVGLVSLMDSPVPSHLVEKIIYHSKYKPKRLGNDIALMKLSEPLTFDETIQPICLPNSEENFPDGKLCWTSGWGATEDGGDASPVLNHAAVPLISNKICNHRDVYGGIISPSMLCAGYLKGGVDSCQGDSGGPLVCQERRLWKLVGATSFGIGCAEVNKPGVYTRITSFLDWIHEQL
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain

phrase: DCSGKYRCHSSFKCIELTARCDGVSDCKNAEDEYRCV
type: REPEAT
name: LDrepeatLR_classA_rpt
description: Low-density lipoprotein (LDL) receptor class A repeat

phrase: IVGGNMSSLTQWPWQVSLQFQGYHLCGGSIITPLWIVTAAHCVYDLYHPKSWTVQVGLVSLMDSPVPSHLVEKIIYHSKYKPKRLGNDIALMKLSEPLTFDETIQPICLPNSEENFPDGKLCWTSGWGATEDGGDASPVLNHAAVPLISNKICNHRDVYGGIISPSMLCAGYLKGGVDSCQGDSGGPLVCQERRLWKLVGATSFGIGCAEVNKPGVYTRITSFLDWIHE
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain

phrase: VTAAH
type: ACTIVE_SITE
name: TRYPSIN_HIS
description: Serine proteases, trypsin family, histidine active site

phrase: DSCQGDSGGPL
type: ACTIVE_SITE
name: TRYPSIN_SER
description: Serine proteases, trypsin family, serine active site

phrase: IVGGNMSSLTQWPWQVSLQFQGYHLCGGSIITPLWIVTAAHCVYDLYHPKSWTVQVGLVSLMDSPVPSHLVEKIIYHSKYKPKRLGNDIALMKLSEPLTFDETIQPICLPNSEENFPDGKLCWTSGWGATEDGGDASPVLNHAAVPLISNKICNHRDVYGGIISPSMLCAGYLKGGVDSCQGDSGGPLVCQERRLWKLVGATSFGIGCAEVNKPGVYTRITSFLDW
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain

phrase: VRVSGQRAALQVFTAAAWRTMCSDDWKSHYAKIACAQLGFPSYVSSDHLRVDALEEQFQGDFVSINHLLSDDKVTALHHSVYMREGCTSGHVVTLKC
type: DOMAIN
name: SRCR
description: SRCR domain

phrase: CIELTARCDGVSDCKNAEDEYR
type: CONSERVED_SITE
name: LDLR_class-A_CS
description: Low-density lipoprotein (LDL) receptor class A, conserved site

phrase: DCSGKYRCHSSFKCIELTARCDGVSDCKNAEDEYRC
type: REPEAT
name: LDrepeatLR_classA_rpt
description: Low-density lipoprotein (LDL) receptor class A repeat

phrase: LQVFTAAAWRTMCSDDWKSHYAKIACAQLGFPSYVSSDHLRVDALEEQFQGDFVSINHLLSDDKVTALHHSVYMREGCTSGHVVTLKC
type: DOMAIN
name: SRCR
description: SRCR domain

phrase: QRAALQVFTAAAWRTMCSDDWKSHYAKIACAQLGFPSYVSSDHLRVDALEEQFQGDFVSINHLLSDDKVTALHHSVYMREGCTSGHVVTLKCSACGT
type: DOMAIN
name: SRCR
description: SRCR domain

phrase: SGKYRCHSSFKCIELTARCDGVSDCKNAEDEYR
type: REPEAT
name: LDrepeatLR_classA_rpt
description: Low-density lipoprotein (LDL) receptor class A repeat

phrase: RIVGGNMSSLTQWPWQVSLQFQGYHLCGGSIITPLWIVTAAHCVYDLYHPKSWTVQVGLVSLMDSPVPSHLVEKIIYHSKYKPKRLGNDIALMKLSEPLTFDETIQPICLPNSEENFPDGKLCWTSGWGATEDGGDASPVLNHAAVPLISNKICNHRDVYGGIISPSMLCAGYLKGGVDSCQGDSGGPLVCQERRLWKLVGATSFGIGCAEVNKPGVYTRITSFLDW
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain
Protein sequence:
MAKAKFERTKPHCNIGTIGHVDHGKTSLTAAITKVLAKTGGATYSAYDQIDKAPEERARGITISTAHVEYETADRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPALVVFLNKVDQVDDPELLELVEMEVRELLSSYQFPGDDIPIVKGSALVTLEDGDPSIGEDRVLELMTQVDAYIPQPERPVDRPFLMPIEDVFSISGRGTVVTGRVERGVVNVGDEVEIVGLKDTVKTTVTGVEMFRKLLDRGEAGDNIGALVRGTKREDVERGQVLAKPGSITPHKKFKAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVTLPEGTEMVMPGDNVAMDVELIAPIAMDEGLRFAIREGGRTVGAGVVSSITA

Annotated regions:
phrase: FLMPIEDVFSISGRGTVVTGRVERGVVNVGDEVEIVGLKDTVKTTVTGVEMFRKLLDRGEAGDNIGALVRGTKREDVERGQVLAKP
type: DOMAIN
name: EFTU_2
description: Elongation factor Tu, domain 2

phrase: NIGTIGHVDHGKTSLTAAITKVLAKTGGATYSAYDQIDKAPEERARGITISTAHVEYETADRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPALVVFLNKVDQVDDPELLEL
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: SITPHKKFKAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGVVTLPEGTEMVMPGDNVAMDVELIAPIAMDEGLRFAIREGGRTVGAGVVSS
type: DOMAIN
name: Transl_elong_EFTu/EF1A_C
description: Translation elongation factor EFTu/EF1A, C-terminal

phrase: DKAPEERARGITIST
type: CONSERVED_SITE
name: G_TR_CS
description: Tr-type G domain, conserved site

phrase: NIGTIGHVDHGKT
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: ARGITIST
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: AHVDCPGHAD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: TGAAQMDGAIL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: LVVFLNKVD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: PHCNIGTIGHVDHGKTSLTAAITKVLAKTGGATYSAYDQIDKAPEERARGITISTAHVEYETADRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPALVVFLNKVDQVDDPELLELVEMEVRELLSSYQFPGDDIPIVKGSALVTLEDGDPSIGEDRVLELMTQVDAYIPQ
type: DOMAIN
name: EF-Tu_GTP-bd
description: Elongation factor Tu (EF-Tu), GTP-binding domain

phrase: KPHCNIGTIGHVDHGKTSLTAAITKVLAKTGGATYSAYDQIDKAPEERARGITISTAHVEYETADRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPALVVFLNKVDQVDDPELLELVEMEVRELLSSYQFPGDDIPIVKGSALVTLEDGDPSIGEDRVLELMTQVDAYIPQP
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: KPHCNIGTIGHVDHGKTSLTAAITKVLAKTGGATYSAYDQIDKAPEERARGITISTAHVEYETADRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPALVVFLNKVDQVDDPELLELVEMEVRELLSSYQFPGDDIPIVKGSALVTLEDGDPSIGEDRVLELMTQVDAYI
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: GTVVTGRVERGVVNVGDEVEIVGLKDTVKTTVTGVEMFRKLLDRGEAGDNIGALVRGTKREDVERGQVL
type: DOMAIN
name: EFTu-like_2
description: Translation elongation factor EFTu-like, domain 2
Protein sequence:
MKKRIQKTILTVLFSSLSSIAFADMQSIAELQRRLEHVAQYSADFEQTVRSSKGQQIQSGRGKFQVKRPNLFRMDINAPQENVIVSDGENLWFYDPFVAQVTVNSVQNAVNGTPFVLLTSSDKQHWTQYEVTQNADTFVLKPKSAKNNLRQFDVQIDQNGLLKGFSTIERDGQTNLYRLRNITTADLSADLFKFSVPKDVEVDDQRRVKK

Annotated regions:
Protein sequence:
MSDQQQPPVYKIALGIEYDGSKYYGWQRQNEVRSVQEKLEKALSQVANEPITVFCAGRTDAGVHGTGQVVHFETTAQRKDAAWTLGVNANLPGDIAVRWVKAVPDDFHARFSATARRYRYIIYNHRLRPAVLSKGVTHFYEPLDAERMHRAAQCLLGENDFTSFRAVQCQSRTPWRNVMHINVTRHGPYVVVDIKANAFVHHMVRNIVGSLMEVGAHNQPESWIAELLAAKDRTLAAATAKAEGLYLVAVDYPDRYDLPKPPMGPLFLAD

Annotated regions:
phrase: AAQCLLGENDFTSFRAVQCQSRTPWRNVMHINVTRHGPYVVVDIKANAFVHHMVRNIVGSLMEVGAHNQPESWIAELLAAKDRTLAAATAKAEGLYLVAVDY
type: DOMAIN
name: PsdUridine_synth_TruA_a/b_dom
description: Pseudouridine synthase I, TruA, alpha/beta domain

phrase: EYDGSKYYGWQRQNEVRSVQEKLEKALSQVANEPITVFCAGRTDAGVHGTGQVVHFETTAQRKDAAWTLGVNANLPGDIAVRWVKAVPDDFHARF
type: DOMAIN
name: PsdUridine_synth_TruA_a/b_dom
description: Pseudouridine synthase I, TruA, alpha/beta domain
Protein sequence:
MNPLFGPNLFLLQQEQQGLAGPLGDPLGGDHFAGGGDLASAPLASAGPSAYSPPGPGPAPPAAMALRNDLGSNINVLKTLNLRFRCFLAKVHELERRNRLLEKQLQQALEEGKQGRRGLARRDQAVQTGFISPIRPLGLPLSSRPAAVCPPSARVLGSPSRSPAGPLASSAACHTSSSTSTSTAFSSSTRFMPGTIWSFSHARRLGPGLEPTLVQGPGLSWVHPDGVGVQIDTITPEIRALYNVLAKVKRERDEYKRRWEEEYTVRIQLQERVTELQEEAQEADACQEELAMKVEQLKAELVVFKGLMSNNLTELDTKIQEKAMKVDMDICRRIDITAKLCDLAQQRNCEDMIQMFQKKLVPSMGGRKRERKAAVEEDTSLSESDGPRQPEGAEEESTALSINEEMQRMLSQLREYDFEDDCDSLTWEETEETLLLWEDFSGYAMAAAEAQGEQEDSLEKVIKDTESLFKTREKEYQETIDQIELELATAKNDMNRHLHEYMEMCSMKRGLDVQMETCRRLITQSGDRKSPAFTAVPLSDPPPPPSETEDSDRDVSSDSSMR

Annotated regions:
phrase: NINVLKTLNLRFRCFLAKVHELERRNRLLEKQLQQALEEGKQGRRGLARRDQAVQTGFISPIRPLGLPLSSRPAAVCPPSARVLGSPSRSPAGPLASSAACHTSSSTSTSTAFSSSTRFMPGTIWSFSHARRLGPGLEPTLVQGPGLSWVHPDGVGVQIDTITPEIRALYNVLAKVKRERDEYKRRWEEEYTVRIQLQERVTELQEEAQEADACQEELAMKVEQLKAELVVFKGLMSNNLTELDTKIQEKAMKVDMDICRRIDITAKLCDLAQQRNCEDMIQMFQKKLVPSMGGRKRERKAAVEEDTSLSESDGPRQPEGAEEESTALSINEEMQRMLSQLREYDFEDDCDSLTWEETEETLLLWEDFSGYAMAAAEAQGEQEDSLEKVIKDTESLFKTREKEYQETIDQIELELATAKNDMNRHLHEYMEMCSMKRGLDVQMETCRRLITQSGDR
type: DOMAIN
name: IF_rod_dom
description: Intermediate filament, rod domain

phrase: SNINVLKTLNLRFRCFLAKVHELERRNRLLEKQLQQALEEGKQGRRGLARRDQAVQTGFISPIRPLGLPLSSRPAAVCPPSARVLGSPSRSPAGPLASSAACHTSSSTSTSTAFSSSTRFMPGTIWSFSHARRLGPGLEPTLVQGPGLSWVHPDGVGVQIDTITPEIRALYNVLAKVKRERDEYKRRWEEEYTVRIQLQERVTELQEEAQEADACQEELAMKVEQLKAELVVFKGLMSNNLTELDTKIQEKAMKVDMDICRRIDITAKLCDLAQQRNCEDMIQMFQKKLVPSMGGRKRERKAAVEEDTSLSESDGPRQPEGAEEESTALSINEEMQRMLSQLREYDFEDDCDSLTWEETEETLLLWEDFSGYAMAAAEAQGEQEDSLEKVIKDTESLFKTREKEYQETIDQIELELATAKNDMNRHLHEYMEMCSMKRGLDVQMETCRRLITQSGDR
type: DOMAIN
name: IF_rod_dom
description: Intermediate filament, rod domain
Protein sequence:
MTHKERPLDVVILAAGQGTRMKSALPKVLHPVAGRPMVAWAVKAAKALGARDIVVVTGHGAEQVEAALAGSGVRFARQAQQLGTGNAFLVGAEALRHQGDADILVLYGDTPLLRPETLRALLADHRAHNSALTILTAELPDATGYGRILRDADGHVERIVEEKAATPEEKAVREFNSGVYVLDARAPELARRITNDNPAGEYYLTDLLELYRQEGAQVRAFKLHDPDEVMGANDRVQLAQAAAVLRRRINTAHMQAGVTLQDPSTIQIEDTVTLGRDVTLEPGVILRGQTRVADGVTIGAYSVVTDSVLEEGVIVKPHSVLEGAHVGKGSDVGPFARLRPGTVLEESVHIGNFVETKNARLAEGVKAGHLAYLGDVTIGAETNVGAGTIIANFDGVHKHQSTVGAGVFIGSNATLIAPRVIGDAAFIAAGSAVHADVPEGALAIARGKQRTLEGWSRRYWSGMHEGVRKKLPWLAGWLERQ

Annotated regions:
phrase: GVTLQDPSTIQIEDTVTLGRDVTLEPGVILRGQTRVADGVTIGAYSVVTDSVLEEGVIVKPHSVLEGAHVGKGSDVGPFARLRPGTVLEESVHIGNFVETKNARLAEGVKAGHLAYLGDVTIGAETNVGAGTIIANFDGVHKHQSTVGAGVFIGSNATLIAPRVIGDAAFIAAGSAVHADVPEGALAIARGK
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain

phrase: VVILAAGQGTRMKSALPKVLHPVAGRPMVAWAVKAAKALGARDIVVVTGHGAEQVEAALAGSGVRFARQAQQLGTGNAFLVGAEALRHQGDADILVLYGDTPLLRPETLRALLADHRAHNSALTIL
type: DOMAIN
name: MobA-like_NTP_Trfase
description: MobA-like NTP transferase
Protein sequence:
MAAKEVKFSVDARDKMLRGVDILANAVKVTLGPKGRNVVLDKSFGAPRITKDGVTVAKEIELEDKFENMGAQMVREVASKSADAAGDGTTTATVLAQAIVREGAKSVAAGMNPMDLKRGIDLAVEAVVADLVKNSKKVTSNDEIAQVGTISANGDAEIGKFLADAMKKVGNEGVITVEEAKSLETELDVVEGMQFDRGYISPYFVTNADKMRVEMDDAYILINEKKLSSLNELLPLLEAVVQTGKPLVIVAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLQDIAILTGGQAISEDLGIKLENVTLNMLGRAKKVMIDKENTTIVNGAGKKADIEARVSQIKAQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKERKDRVDDAMHATRAAVEEGIVPGGGVALLRASEQLKGLRTKNDDQKTGVEIVRKALSAPARQIAINAGEDGSVIVGKILENKTYAYGFDSQTGEYVNLVTKGIIDPTKVVRTAIQNAASVAALLITTEAMVAELPKKGGAGPAMPPGGGMGGMDF

Annotated regions:
phrase: AAVEEGIVPGG
type: CONSERVED_SITE
name: Chaperonin_Cpn60_CS
description: Chaperonin Cpn60, conserved site
Protein sequence:
MTKTTILLLCGGGSSEHEISLVSANYIQQQLELTPEFHVIRVEMKKEGWFSEQGALVYLDTNSATLNSDKASYPIDFVVPCIHGFPGETGDIQSMLELAGIPYLGCGPEASANSFNKITSKLWYDALDIPNTPYLFLTQNTPSSIDKAKQAFGHWGSIFVKAARQGSSVGCYKVTTEDQIAPAIEAAFGFSEQVLVEQAVKPRELEVSAYEMNGKLYISKPGEVIAPEGTFYSYEEKYSANSHARTVLEAENLTEKHKELIQTYAERVFIHMKLRHLSRIDFFLTQEGQIYLNEVNTFPGMTPISMFPKMLEHNGHRFSEFLVQCVTNTLVNAK

Annotated regions:
phrase: ILLLCGGGSSEHEISLVSANYIQQQLELTPEFHVIRVEMKKEGWFSEQGALVYLDTNSATLNSDKASYPIDFVVPCIHGFPGETGDIQSMLELAGIPYLG
type: DOMAIN
name: Dala_Dala_lig_N
description: D-alanine--D-alanine ligase, N-terminal domain

phrase: KLWYDALDIPNTPYLFLTQNTPSSIDKAKQAFGHWGSIFVKAARQGSSVGCYKVTTEDQIAPAIEAAFGFSEQVLVEQAVKPRELEVSAYEMNGKLYISKPGEVIAPEGTFYSYEEKYSANSHARTVLEAENLTEKHKELIQTYAERVFIHMKLRHLSRIDFFLTQEGQIYLNEVNTFPGMTPISMFPKMLEHNGHRFSEFLVQCV
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold

phrase: HGFPGETGDIQ
type: CONSERVED_SITE
name: D-Ala_lig_Van_CS
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site

phrase: ALDIPNTPYLFLTQNTPSSIDKAKQAFGHWGSIFVKAARQGSSVGCYKVTTEDQIAPAIEAAFGFSEQVLVEQAVKPRELEVSAYEMNGKLYISKPGEVIAPEGTFYSYEEKYSANSHARTVLEAENLTEKHKELIQTYAERVFIHMKLRHLSRIDFFLTQEGQIYLNEVNTFPGMTPISMFPKMLEHNGHRFSEFLVQC
type: DOMAIN
name: Dala_Dala_lig_C
description: D-alanine--D-alanine ligase, C-terminal

phrase: MKLRHLSRIDFFLTQEGQIYLNEVNTFP
type: CONSERVED_SITE
name: D-Ala_lig_Van_CS
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site