nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
ASFAEAPPGNPKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEESTLYDYLLNPXKYIPGTKMVFPGLXKPQERADLIAYLKESTA

Annotated regions:
phrase: KAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEESTLYDYLLNPXKYIPGTKMVFPGLXKPQERADLIAYLK
type: DOMAIN
name: Cyt_c-like_dom
description: Cytochrome c-like domain

phrase: GNPKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEESTLYDYLLNPXKYIPGTKMVFPGLXKPQERADLIAYLKES
type: DOMAIN
name: Cyt_c-like_dom
description: Cytochrome c-like domain
Protein sequence:
MRVTMSLEALTTEALAAIAAAQDLVALDQVRVQFTGKKSQLAEQSKALGKMDPEERKVQGAAIHAVRETINNALTERQTALQQAALAQKLASETIDITLPGRGQCVGTVHPVTQVQERICQFFTKAGFTVATGPEVEDDYHNFEALNIPGHHPARAMHDTFYFDANHLLRTHTSGVQIRTMETSQPPIRIVCPGRVYRCDSDQTHSPMFHQIEGLYVAENTSFAELKGLLINLLNEFFEKDLKVRFRPSYFPFTEPSAEVDIMDERGRWLEVLGCGMVHPNVLRAAGIDPDKYKGFAFGLGVERFAMLRYGINDLRMFYQNDVRFLRQFA

Annotated regions:
phrase: TIDITLPGRGQCVGTVHPVTQVQERICQFFTKAGFTVATGPEVEDDYHNFEALNIPGHHPARAMHDTFYFDANHLLRTHTSGVQIRTMETSQPPIRIVCPGRVYRCDSDQTHSPMFHQIEGLYVAENTSFAELKGLLINLLNEFFEKDLKVRFRPSYFPFTEPSAEVDIMDERGRWLEVLGCGMVHPNVLRAAGIDPDKYKGFAFGLGVERFAMLRYGINDLRMFYQNDVRFLRQ
type: DOMAIN
name: Phenylalanyl-tRNA_Synthase
description: Phenylalanyl-tRNA synthetase

phrase: TQVQERICQFFTKAGFTVATGPEVEDDYHNFEALNIPGHHPARAMHDTFYFDANHLLRTHTSGVQIRTMETSQPPIRIVCPGRVYRCDSDQTHSPMFHQIEGLYVAENTSFAELKGLLINLLNEFFEKDLKVRFRPSYFPFTEPSAEVDIMDERGRWLEVLGCGMVHPNVLRAAGIDPDKYKGFAFGLGVERFAMLRYGINDLRMFYQNDVRFLR
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: QDLVALDQVRVQFTGKKSQLAEQSKALGKMDPEERKVQGAAIHAVRETINNALTERQTALQQAALAQK
type: DOMAIN
name: Phe-tRNA_ligase_II_N
description: Phenylalanine-tRNA ligase, class II, N-terminal
Protein sequence:
MCMTDPIADMLTRIRNAQAAEKKEVKIPSSKLKKAILKILKDEGYIESYQEIVSDGKLSVDICLKYFNGGPVISSLTRISKPGLRRYSSRNNLPKVMHGLGIAIVSTSKGVMTERSARAGGVGGELLCIVA

Annotated regions:
phrase: GIAIVSTSKGVMTERSA
type: CONSERVED_SITE
name: Ribosomal_uS8_CS
description: Small ribosomal subunit protein uS8, conserved site
Protein sequence:
MKYELSAKEARVIGCLLEKQVTTPDQYPLSLNGIQLACNQKTNREPVMELTESEVQQILDLLLKKHFLRTLSGFGNRVVKYEHRFCNSEFGQLKLSAAEVAVVATLLLRGAQTPGELRTRTNRMHEFNDVSEVEQVLTNLSAREDGPFVVRLAREPGKRESRFMHLFCGQIDEAPAEAALENDTELTQRVSVLENEVAQLKQQLQALLERGTHD

Annotated regions:
Protein sequence:
MQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSEDPRFHAGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAMPQGLDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGASRVLPRDEFAESRPLEKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGVDSVMTPPERRAQAWQRLVADLPESFYTQAAKEISLSEAPNFAEAIINNQIQGRTLVKVN

Annotated regions:
phrase: KTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSEDPRFHAGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAMPQGLDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGASRVLPRDEFAESRPLEKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGVDSVMTPPERRAQAWQRLVADLPESFYTQAAKEISLSEAPNFAEAIINNQIQGRTL
type: DOMAIN
name: PKS_ER
description: Polyketide synthase, enoylreductase domain

phrase: GVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGASRVLPRDEFAESRPLEKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGVDSVMTPPERRAQAWQ
type: DOMAIN
name: ADH-like_C
description: Alcohol dehydrogenase-like, C-terminal

phrase: EGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSEDPRFHAGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAM
type: DOMAIN
name: ADH-like_N
description: Alcohol dehydrogenase-like, N-terminal
Protein sequence:
MKKEKAVVVFSGGQDSTTCLFWAIEQFAEVEAVTFNYNQRHKLEIDCAAEIAKELGIKHTVLDMSLLNQLAPNALTRTDMEITHEEGELPSTFVDGRNLLFLSFAAVLAKQVGARHIVTGVCETDFSGYPDCRDVFVKSLNVTLNLSMDYPFVIHTPLMWIDKAETWKLSDELGAFEFVREKTLTCYNGIIGDGCGECPACQLRKAGLDTYLQEREGANN

Annotated regions:
Protein sequence:
MDDLESEFNLKVVLVSFKQCLNEKEEVLLEYYLAGWRGLVRFLNSLGTIFSFISKDVVTKLQIMDQLRSGPQQEHYSSLQAMVAYEVGNQLVDLERRSRHPDSGCRTVLRLHRALRWLQLFLEGVRTSPEDARTSVLCTDSYNASLATYHPWIIRRAVTVAFCALPTRKVFLESMNVGSSEQAVEMLNEALPFIERVYNISQKLYAEHALLDLP

Annotated regions:
phrase: DLESEFNLKVVLVSFKQCLNEKEEVLLEYYLAGWRGLVRFLNSLGTIFSFISKDVVTKLQIMDQLRSGPQQEHYSSLQAMVAYEVGNQLVDLERRSRHPDSGCRTVLRLHRALRWLQLFLEGVRTSPEDARTSVLCTDSYNASLATYHPWIIRRAVTVAFCALPTRKVFLESMNVGSSEQAVEMLNEALPFIERVYNI
type: DOMAIN
name: Glycolipid_transfer_prot_dom
description: Glycolipid transfer protein domain

phrase: LLEYYLAGWRGLVRFLNSLGTIFSFISKDVVTKLQIMDQLRSGPQQEHYSSLQAMVAYEVGNQLVDLERRSRHPDSGCRTVLRLHRALRWLQLFLEGVRTSPEDARTSVLCTDSYNASLATYHPWIIRRAVTVAFCALPTRKVFLESM
type: DOMAIN
name: Glycolipid_transfer_prot_dom
description: Glycolipid transfer protein domain
Protein sequence:
MLLLIDNYDSFTYNLVHYLGELGAELDVRRNDSLTVEEAMALRPEGIVLSPGPCDPDKAGICLPLIDAAAKAAVPLMGVCLGHQAIGQPFGGTVVRAPVPMHGKVDRMFHQGRGVLKDLPSPFRATRYHSLIVERATLPACLEVTGETEDGLIMALSHRELPIHGVQFHPESIESEHGHKILENFLNTTRRLETAA

Annotated regions:
phrase: MLLLIDNYDSFTYNLVHYLGELGAELDVRRNDSLTVEEAMALRPEGIVLSPGPCDPDKAGICLPLIDAAAKAAVPLMGVCLGHQAIGQPFGGTVVRAPVPMHGKVDRMFHQGRGVLKDLPSPFRATRYHSLIVERATLPACLEVTGETEDGLIMALSHRELPIHGVQFHPESIESEHGHKILENFL
type: DOMAIN
name: TrpG/PapA_dom
description: Anthranilate synthase/para-aminobenzoate synthase like domain

phrase: LLLIDNYDSFTYNLVHYLGELGAELDVRRNDSLTVEEAMALRPEGIVLSPGPCDPDKAGICLPLIDAAAKAAVPLMGVCLGHQAIGQPFGGTVVRAPVPMHGKVDRMFHQGRGVLKDLPSPFRATRYHSLIVERATLPACLEVTGETEDGLIMALSHRELPIHGVQFHPESIESEHGHKILENF
type: DOMAIN
name: TrpG/PapA_dom
description: Anthranilate synthase/para-aminobenzoate synthase like domain

phrase: LLIDNYDSFTYNLVHYLGELGAELDVRRNDSLTVEEAMALRPEGIVLSPGPCDPDKAGICLPLIDAAAKAAVPLMGVCLGHQAIGQPFGGTVVRAPVPMHGKVDRMFHQGRGVLKDLPSPFRATRYHSLIVERATLPACLEVTGETEDGLIMALSHRELPIHGVQFHPESIESEHGHKILENF
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase
Protein sequence:
MEDEDRRDLISNHEQRPAEGVTAPDSGAQRNYCSRGAVYSAASILVALLIAGQAVTVYFVYQQSGQISKLTRTSQNLQLESLSRKLPQSAKPVSKLRMAKFSMPMVMRELPLAPKVDMTPLEDTAKLSNKTEDQVKHLLLRADPSKMFPELKDSLMENLNRLKNTMTDQDWQSFESWMHKWLLFEMAKKPQTQEPAEIPANEVQSKCQAESSFGGVHPGQFRPQCDEHGDYLPKQCHASTGYCWCVYKNGTKIEGTETREKLDCPATPGGLDAEELMYSGVDLLKLDSDKEAK

Annotated regions:
phrase: RPQCDEHGDYLPKQCHASTGYCWCVYKNGTKIEGTETREKLDCPAT
type: DOMAIN
name: Thyroglobulin_1
description: Thyroglobulin type-1

phrase: KCQAESSFGGVHPGQFRPQCDEHGDYLPKQCHASTGYCWCVYKNGTKIEGTETREKLD
type: DOMAIN
name: Thyroglobulin_1
description: Thyroglobulin type-1

phrase: QSKCQAESSFGGVHPGQFRPQCDEHGDYLPKQCHASTGYCWCVYKNGTKIEGTETREKLD
type: DOMAIN
name: Thyroglobulin_1
description: Thyroglobulin type-1

phrase: FRPQCDEHGDYLPKQCHASTGYCWCVYKN
type: DOMAIN
name: Thyroglobulin_1
description: Thyroglobulin type-1

phrase: FGGVHPGQFRPQCDEHGDYLPKQCHASTGYCWCVYKNGTKIEGTETREKLD
type: DOMAIN
name: Thyroglobulin_1
description: Thyroglobulin type-1

phrase: EDRRDLISNHEQRPAEGVTAPDSGAQRNYCSRGAVYSAASILVALLIAGQAVTVYFVYQQSGQISKLTRTSQNLQLESLSRKLPQSAKPVSKLRMAKFSMPMVMREL
type: DOMAIN
name: MHC_II-assoc_invar/CLIP_MHC-bd
description: MHC class II-associated invariant chain/CLIP, MHC II-interacting

phrase: NKTEDQVKHLLLRADPSKMFPELKDSLMENLNRLKNTMTDQDWQSFESWMHKWLLFEMAKKPQTQEP
type: DOMAIN
name: MHC_II-assoc_invariant_trimer
description: MHC class II-associated invariant chain, trimerisation
Protein sequence:
MEVRQAINSDYAKTLDTDGLRKAFLVDQVFERDALKLTYSHIDRIIVGGVMPVARAVEVPSSLGKSIGVSYLLERRELGAINIGGDGWVDVDGTRHTVRNEEAIYIGQGTQAIAFGSDDAARPAKFYLNCAPAHTSYPTRTISLAQASPQTLGDPATSNRRTIYKFIVPEVLPTCQLSMGMTKLEPGSLWNTMPCHTHERRMEVYFYFNVADDAAVFHMMGEPNETRHILVHNEQAVISPSWSIHSGVGTRAYTFIWGMVGENQVFGDMDHIAVRDLR

Annotated regions:
Protein sequence:
MALPSSSLSSQIHTGATTQCIPHFHGSLNAGTSAGKRRSLYLRWGKGPSKIVACAGQDPFSVPTLVKREFPPGFWKDHVIESLMPSYKVAPSDEKRIETLITEIKNMFRSMGYGETNPSAYDTAWVARIPAVDGSEKPQFPETLEWILQNQLKDGSWGEEFYFLAYDRILATLACIITLTIWQTGDTQVQKGIEFFKTQAGKIEEEADSHRPSGFEIVFPAMLKEAKALGLALPYELPFIQQIIEKREAKLQRLPPDLLYALPTTLLYSLEGLQEIVDWEKIMKLQSKDGSFLSSPASTAAVFMRTGNKKCLEFLNFVLKKFGNHVPCHYPLDLFERLWAVDTVERLGIDHHFKEEIKDALDYVYSHWDERGIGWARENPVPDIDDTAMGLRILRLHGYNVSSDVLKTFRDENGEFFCFLGQTQRGVTDMLNVNRCSHVAFPGETIMEEAKLCTERYLRNALEDGGASDKWALKKNIRGEVEYALKYPWHRSMPRLEARSYIENYGPNDVWLGKTMYMMPNISNEKYLELAKLDFNRVQFFHRQELQDIRRWWNSSGFSQLGFTRERVAEIYFSPASFLFEPEFATCRAVYTKTSNFTVILDDLYDAHGTLDNLKLFSESVKRWDLSLVDQMPQDMKICFKGFYNTFNEIAEEGRKRQGRDVLSYIQKVWEVQLEAYTKEAEWSAVRYVPSYDEYIGNASVSIALGTVVLISALFTGEILTDDILSKIGRDSRFLYLMGLTGRLVNDTKTYQAERGQGEVASAVQCYMKDHPEISEEEALKHVYTIMDNALDELNREFVNNRDVPDTCRRLVFETARIMQLFYMDGDGLTLSHNMEIKEHVKNCLFQPVA

Annotated regions:
phrase: GFSQLGFTRERVAEIYFSPASFLFEPEFATCRAVYTKTSNFTVILDDLYDAHGTLDNLKLFSESVKRWDLSLVDQMPQDMKICFKGFYNTFNEIAEEGRKRQGRDVLSYIQKVWEVQLEAYTKEAEWSAVRYVPSYDEYIGNASVSIALGTVVLISALFTGEILTDDILSKIGRDSRFLYLMGLTGRLVNDTKTYQAERGQGEVASAVQCYMKDHPEISEEEALKHVYTIMDN
type: DOMAIN
name: Terpene_synthase_metal-bd
description: Terpene synthase, metal-binding domain

phrase: SNEKYLELAKLDFNRVQFFHRQELQDIRRWWNSSGFSQLGFTRERVAEIYFSPASFLFEPEFATCRAVYTKTSNFTVILDDLYDAHGTLDNLKLFSESVKRWDLSLVDQMPQDMKICFKGFYNTFNEIAEEGRKRQGRDVLSYIQKVWEVQLEAYTKEAEWSAVRYVPSYDEYIGNASVSIALGTVVLISALFTGEILTDDILSKIGRDSRFLYLMGLTGRLVNDTKTYQAERGQGEVASAVQCYMKDHPEISEEEALKHVYTIMDNALDELNREFVNNRDVPDTCRRLVFETARIMQLFYMDGDGLTLSHNMEIKEHVKNCLFQP
type: DOMAIN
name: Terpene_cyclase-like_1_C
description: Terpene cyclase-like 1, C-terminal domain

phrase: DWEKIMKLQSKDGSFLSSPASTAAVFMRTGNKKCLEFLNFVLKKFGNHVPCHYPLDLFERLWAVDTVERLGIDHHFKEEIKDALDYVYSHWDERGIGWARENPVPDIDDTAMGLRILRLHGYNVSSDVLKTFRDENGEFFCFLGQTQRGVTDMLNVNRCSHVAFPGETIMEEAKLCTERYLRNALEDGGASDKWALKKNIRGEVEYA
type: DOMAIN
name: Terpene_synth_N
description: Terpene synthase, N-terminal domain
Protein sequence:
MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPRGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADEEYEDEEEEAEAE

Annotated regions:
phrase: GGGTGS
type: CONSERVED_SITE
name: Tubulin_CS
description: Tubulin, conserved site

phrase: PRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPRGLKMAATFVGNSTSIQEMFRRV
type: DOMAIN
name: Tubulin/FtsZ_2-layer-sand-dom
description: Tubulin/FtsZ, 2-layer sandwich domain

phrase: MRE
type: BINDING_SITE
name: Beta-tubulin_BS
description: Beta tubulin, autoregulation binding site

phrase: EILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDI
type: DOMAIN
name: Tubulin_FtsZ_GTPase
description: Tubulin/FtsZ, GTPase domain

phrase: LNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPRGLKMAATFVGNSTSIQEMFRRVS
type: DOMAIN
name: Tubulin/FtsZ_2-layer-sand-dom
description: Tubulin/FtsZ, 2-layer sandwich domain

phrase: INVYYNEASGGRYVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFP
type: DOMAIN
name: Tubulin_FtsZ_GTPase
description: Tubulin/FtsZ, GTPase domain
Protein sequence:
MFLNSLLTNFAALEVGQHLYWQIGNIRLHGQVFLTSWILLGALLVFISLGTKKMENDPKGLQNLLEFLWDYIRDLARTQIGEKVYRDWMPFIGTLFLFVFVSNWGGALIPWRLIKLPSGELGAPTADINTTIALALLVSLSYFYAGLSNKGWRYFEYYVHPTPIMLPFKILEDFTKPLSLSFRLFGNILADELVVGVLVFLVPLILPIPVMFLGLFTSAIQALIFATLAAYYIGEAVEEHH

Annotated regions:
phrase: SLSFRLFGN
type: ACTIVE_SITE
name: ATP_synth_F0_asu_AS
description: ATP synthase, F0 complex, subunit A, active site
Protein sequence:
MKSLETMARYKKELTECARNLKLPFLAEHLDEILHEAQEKQQTYSEFLSTCLMRELRDKERRSYLTRLKFAGLPARYDLDLYDFSRTEGIDQRQMRELRELVWIRRTYNLLLVGDSGTGKTFIASGLIHEAVKAGYKAYLLTLEELFVCLKTKEISRPAMKTYKRIMKAQLLAIDDVTLFPLKGEDVLLLFKLVNCVQG

Annotated regions:
phrase: ARNLKLPFLAEHLDEILHEAQEKQQTYSEFLSTCLMRELRDKERRSYLTRLKFAGLPARYDLDLYDFSRTEGIDQRQMRELRELVWIRRTYNLLLVGDSGTGKTFIASGLIHEAVKAGYKAYLLTLEELFVCLKTKEISRPAMKTYKRIMKAQLLAIDDVTLFPLKGEDVLLLFKLV
type: DOMAIN
name: IstB_ATP-bd
description: IstB-like ATP-binding domain

phrase: LLLVGDSGTGKTF
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_1
description: Sigma-54 interaction domain, ATP-binding site 1
Protein sequence:
MIFDEDSSSVAQESGYMGVGSPYSSDVGRISMSDHWNKLTKPSSIKVVNHGNALNKADLIIEPLESGFALTLGNALRRVMMSSLRGFAVYGVEIENVLHEFTSISGVREDVTDILLNISMIRLKLSGMDNKVLSLKVKGPCEVRSGMIADTPDCTILNKDLLICTLDQDVDFNIKMYVNSGKGYVPAVKRKSINKFGLSDVPVNFIATNALYSPIKKASFRVESSRIGQFTDYDRLIMSVETDHSILPDEAVALAARILQDQFQQFINFDETDEPHQKVDTKDVLPYDSNLLRKVDELELSVRSYNCLKNDNITYIGDLVQKTESDMLRTPNFGRKSLNEINELLASMNLHLGMKIANWPPESIESLSKQYSEE

Annotated regions:
phrase: KADLIIEPLESGFALTLGNALRRVMMSSLRGFAVYGVEIENVLHEFTSISGVREDVTDILLNISMIRLKLSGMDNKVLSLKVKGPCEVRSGMIADTPDCTILNKDLLICTLDQDVDFNIKMYVNSGKGYVPAVKRKSINKFGLSDVPVNFIATNALYSPIKKASFRVESSRIGQFTDYDRLIMSVETDHSILPDEAVALAARILQDQFQQFIN
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: VEIENVLHEFTSISGVREDVTDILLNISMIRLKLSGMDNKVLSLKVKGPCEVRSGMIADTPDCTILNKDLLICTLDQDVDFNIKMYVNSGKGYVPAVKRKSINKFGLSDVPVNF
type: DOMAIN
name: DNA-dir_RNA_pol_insert
description: DNA-directed RNA polymerase, insert domain

phrase: EPLESGFALTLGNALRRVMMSSLRGFAVYGVEIENVLHEFTSISGVREDVTDILLNISMIRLKLSGMDNKVLSLKVKGPCEVRSGMIADTPDCTILNKDLLICTLDQDVDFNIKMYVNSGKGYVPAVKRKSINKFGLSDVPVNFIATNALYSPIKKASFRVESSRIGQFTDYDRLIMSVETDHSILPDEAVALAARILQDQ
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: NLLRKVDELELSVRSYNCLKNDNITYIGDLVQKTESDMLRTPNFGRKSLNEINELL
type: DOMAIN
name: RNAP_asu_C
description: RNA polymerase, alpha subunit, C-terminal
Protein sequence:
MLVLPEELREKLKKPFGKVYKTLPDIDGDIVTVGDIVTKTAIENNIIPKLSIFDLKTRRNIPVKINHVFKKVIKVKNPPGCISDEAIESIKYLSTINDRNIALLVDGEEDLLALIVIKYFPIGTYVLYGQPDEGIVVLKINKKLKQEIEEILKQFKKI

Annotated regions:
Protein sequence:
MLIRVEIPIDAPGIDALLRRSFESDAEAKLVHDLREDGFLTLGLVATDDEGQVIGYVAFSPVDVQGEDLQWVGMAPLAVDEKYRGQGLARQLVYEGLDSLNEFGYAAVVTLGDPALYSRFGFELAAHHDLRCRWPGTESAFQVHRLADDALNGVTGLVEYHEHFNRF

Annotated regions:
phrase: MLIRVEIPIDAPGIDALLRRSFESDAEAKLVHDLREDGFLTLGLVATDDEGQVIGYVAFSPVDVQGEDLQWVGMAPLAVDEKYRGQGLARQLVYEGLDSLNEFGYAAVVTLGDPALYSRFGFELAAHHDLRCRWPGTESAFQVHRLA
type: DOMAIN
name: GNAT_dom
description: GNAT domain

phrase: RRSFESDAEAKLVHDLREDGFLTLGLVATDDEGQVIGYVAFSPVDVQGEDLQWVGMAPLAVDEKYRGQGLARQLVYEGLDSLNEFGYAAVVTLGDPALYSRFG
type: DOMAIN
name: GNAT_dom
description: GNAT domain
Protein sequence:
MSEFDLTTREGRWRHFGSVDPIEGTKPTVKEEMTDLQSTHKDFLFEIEEVGIKNLVYPVVIDNYQTAGTFAFSTSLTREEKGINMSRILESVEKHYDNGLELSFNNLEAVLHTLEKHMKQSSAGVDVSGKWFFNRYSPVTNIKAVGNADVTYGLAVAGDQVTRKELTVQATVTTLCPCSKEISEYSAHNQRGVITVKMYIDPSATLPTDYKEVILDAMEANASSILYPILKRPDEKRVTERAYENPRFVEDLIRLIAADLVELDWAEGFDIECRNEESIHQHDAFAKLKYRK

Annotated regions:
Protein sequence:
MISNSDCDENLIKQQQQEIQDKNFLIDVAIGYTKSNALSCALKYKIPQLLEDKSKSCKELSEILKVNCDNLYRLLRTLSTIGIFIEDEVEDGVFRNSRLSNLLRNSNSDSWVNNVYLQSHPNVIQSFMYLDKTIECGTSQGMTSQGFSSAWELFEKDKSLNAHFHNTMTSFTSDEIKTILEYIDFNQYKSIVDLGGSSGELLKSIAKSSRGQLVESFINFDLPLVINQNKVNNENGAAEFDKRYSEVASDLFVDSDYPSADCYTLKFIFHMFNDDKVLTILDKISKSIKPNGKVYVFDHIVQPKNQPYAPFYFDLQMIVNFNGKERSQNEWKTIFEKSPFKIDTILILPDSKRMSVIELSLKQ

Annotated regions:
phrase: YLDKTIECGTSQGMTSQGFSSAWELFEKDKSLNAHFHNTMTSFTSDEIKTILEYIDFNQYKSIVDLGGSSGELLKSIAKSSRGQLVESFINFDLPLVINQNKVNNENGAAEFDKRYSEVASDLFVDSDYPSADCYTLKFIFHMFNDDKVLTILDKISKSIKPNGKVYVFDHIVQPKNQPYAPFYFDLQMIVNFNGKERSQNEWKTIFEKSP
type: DOMAIN
name: O_MeTrfase_dom
description: O-methyltransferase domain

phrase: QDKNFLIDVAIGYTKSNALSCALKYKIPQLLEDKSKSCKELSEILKVNCDNLYRLLRTLSTIGIFIEDEVEDGVFRNSRLSNL
type: DOMAIN
name: Plant_O-MeTrfase_dimerisation
description: Plant O-methyltransferase dimerisation domain
Protein sequence:
MQDVCNSQEILQDYAMELDRADVALLNAVQKNNRLTSEELADKVGLSPTACQRRLKRLRSLGVIEADVSIVSPKAVGRPVTMIVMVSLERERADIVDRFKSSIRNTREVMIGYYVTGDADFILIVTAKDMEEYEEFTRRFFYENHDIKGFKTMVVMDRVKATFAVPIEI

Annotated regions:
phrase: LDRADVALLNAVQKNN
type: DOMAIN
name: AsnC-type_HTH_dom
description: AsnC-type HTH domain

phrase: RLTSEELADKV
type: DOMAIN
name: AsnC-type_HTH_dom
description: AsnC-type HTH domain

phrase: GLSPTACQRRLKRLRSLGV
type: DOMAIN
name: AsnC-type_HTH_dom
description: AsnC-type HTH domain

phrase: DRADVALLNAVQKNNRLTSEELADKVGLSPTACQRRLKRLRSLGVIE
type: DOMAIN
name: ArsR-like_HTH
description: ArsR-like helix-turn-helix domain

phrase: VMVSLERERADIVDRFKSSIRNTREVMIGYYVTGDADFILIVTAKDMEEYEEFTRRFFYENHDIKGFKTMVVM
type: DOMAIN
name: Tscrpt_reg_AsnC/Lrp_C
description: Transcription regulator AsnC/Lrp, ligand binding domain

phrase: LDRADVALLNAVQKNNRLTSEELADKVGLSPTACQRRLKRLRSLGVIEADVSIVSPKAVGR
type: DOMAIN
name: AsnC-type_HTH_dom
description: AsnC-type HTH domain

phrase: TSEELADKVGLSPTACQRRLKRLRSL
type: CONSERVED_SITE
name: Tscrpt_reg_HTH_AsnC-type_CS
description: Transcription regulator HTH, AsnC-type, conserved site
Protein sequence:
MSDMAKNLILWLIIAVVLMAVFQSFSPGESSRAQTDYTTFLKEVKQGQIREVRINSEAREIRGVKRSGDAFKTYIPYFDDQLISDLVKQDVRVLGEPPEQPSIFASIFISWFPMLLLIAVWIFFMRQMQGGGGRGAMSFGKSKARLLSEDQIKTTFADVAGCDEAKEDVSELVDFLRDPSKFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQARKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGHEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDIRGREQILKVHIRKVPVADDVKPSVIARGTPGFSGADLANLVNEAALFAARANRRLVSMEEFEKAKDKIMMGSERKSMVMSEEEKTMTAYHEAGHAIVGRLVPEHDPVYKVSIIPRGRALGVTMYLPEQDRVSHTKQHLESMISSLFGGRLAESIIYGDDKVTTGASNDIERATDIARKMVTQWGLSDKMGPMLYAEDEGEVFLGKSMSKASHMSDDTARAIDAEIKSVIDRNYDRAKKILEDNIDILHTMKDALMKYETIDALQIDDLMARREVRPPAGWDDRSSDGDKPSGGAPSKEGEITNDGVDKPTVGKPGDIPG

Annotated regions:
phrase: IIVIAATNRPDVLDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: VLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQARKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGHEGIIVIAATNRPDVLDPALLRPGRFDRQVVV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: LILWLIIAVVLMAVFQSFSPGESSRAQTDYTTFLKEVKQGQIREVRINSEAREIRGVKRSGDAFKTYIPYFDDQLISDLVKQDVRVLGE
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular

phrase: MVMSEEEKTMTAYHEAGHAIVGRLVPEHDPVYKVSIIPRGRALGVTMYLPEQDRVSHTKQHLESMISSLFGGRLAESIIYGDDKVTTGASNDIERATDIARKMVTQWGLSDKMGPMLYAEDEGEVFLGKSMSKASHMSDDTARAIDAEIKSVIDRNYDRAKKILEDNIDILHTMKDALMKYETIDALQID
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: SVIARGTPGFSGADLANLVNEAALFAARANRRLVSMEEFE
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: IPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQARKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGHEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain
Protein sequence:
MHCPFCSATDTKVIDSRLVADGHQVRRRRECVQCHERFTTFEGAELVMPRVVKQDGSRQPFDEEKLRGGMLRAVEKRPVSMDQIEQALTKIKSTLRATGEREVKSEMIGNLMMDQLVNLDKVAYIRFASVYRAFEDVSEFGEAIAKLQK

Annotated regions:
phrase: PRVVKQDGSRQPFDEEKLRGGMLRAVEKRPVSMDQIEQALTKIKSTLRATGEREVKSEMIGNLMMDQLVNLDKVAYIRFASVYRAFEDVS
type: DOMAIN
name: ATP-cone_dom
description: ATP-cone domain

phrase: MHCPFCSATDTKVIDSRLVADGHQVRRRRECVQCHERFTTF
type: DOMAIN
name: NrdR-like_N
description: Transcriptional repressor NrdR-like, N-terminal domain

phrase: RVVKQDGSRQPFDEEKLRGGMLRAVEKRPVSMDQIEQALTKIKSTLRATGEREVKSEMIGNLMMDQLVNLDKVAYIRFASVYRAFE
type: DOMAIN
name: ATP-cone_dom
description: ATP-cone domain
Protein sequence:
MDNGMFSGFIMIKNLLLFCISMNLSSHFGFSQMPTSSVKDETNDNITIFTRILDGLLDGYDNRLRPGLGERITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDERLRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAEDGSRLNQYHLMGQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKKALEAAKIKKKREVILNKSTNAFTTGKMSHPPNIPKEQTPAGTSNTTSVSVKPSEEKTSESKKTYNSISKIDKMSRIVFPVLFGTFNLVYWATYLNREPVIKGAASPK

Annotated regions:
phrase: TYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKKALEAAKIKKKREVILNKSTNAFTTGKMSHPPNIPKEQTPAGTSNTTSVSVKPSEEKTSESKKTYNSISKIDKMSRIVFPVLFGTFNLVY
type: DOMAIN
name: Neurotrans-gated_channel_TM
description: Neurotransmitter-gated ion-channel transmembrane domain

phrase: TRILDGLLDGYDNRLRPGLGERITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDERLRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVVYVWTNGSTKSVVVAEDGSRLNQYHLMGQTVGTENISTSTGEYTIMTAHFHLKRK
type: DOMAIN
name: Neur_chan_lig-bd
description: Neurotransmitter-gated ion-channel ligand-binding domain

phrase: CPMQLEDFPMDAHA
type: CONSERVED_SITE
name: Neurotransmitter_ion_chnl_CS
description: Neurotransmitter-gated ion-channel, conserved site

phrase: YFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKKALEAAKIKKKREVILNKSTNAFTTGKMSHPPNIPKEQTPAGTSNTTSVSVKPSEEKTSESKKTYNSISKIDKMSRIVFPVLFGTFNLVY
type: DOMAIN
name: Gabra-1-6_TM
description: Gamma-aminobutyric acid receptor subunit alpha 1-6, transmembrane domain
Protein sequence:
MLVLGLETSCDETGVALYDSERGLLADALFSQIDLHRAYGGVVPELASRDHVKRMLPLIRQTLAEADCVATDIDAIAYTAGPGLVGALLVGASCAQALAFAWDIPALGVHHMEGHLLAPMLEENPPQFPFVALLVSGGHTQLVRVDGIGQYELLGETLDDAAGEAFDKTAKMMGMQYPGGPEISKAAMQGVAGRFVFPRPMTDRPGLEFSFSGLKTSALNTWQQCRNAGDDSEQTRCDIALAFQQAVVETLTIKCKRALKQTGLKSLVIAGGVSANKALRASLESMLGDLRGHVYYARPEFCTDNGAMIAFAGCQRLQVGQKEDLSISVQARWPMEQLSGL

Annotated regions:
phrase: LLADALFSQIDLHRAYGGVVPELASRDHVKRMLPLIRQTLAEADCVATDIDAIAYTAGPGLVGALLVGASCAQALAFAWDIPALGVHHMEGHLLAPMLEENPPQFPFVALLVSGGHTQLVRVDGIGQYELLGETLDDAAGEAFDKTAKMMGMQYPGGPEISKAAMQGVAGRFVFPRPMTDRPGLEFSFSGLKTSALNTWQQCRNAGDDSEQTRCDIALAFQQAVVETLTIKCKRALKQTGLKSLVIAGGVSANKALRASLESMLGDLRGHVYYARPEFCTDNGAMIA
type: DOMAIN
name: Gcp-like_dom
description: Gcp-like domain

phrase: MLVLGLETSCDETGVALYDSERGLLADALFSQIDLHRAYGGVVPELASRDHVKRMLPLIRQTLAEADCVATDIDAIAYTAGPGLVGALLVGASCAQALAFAWDIPALGVHHMEGHLLAPMLEENPPQFPFVALLVSGGHTQLVRVDGIGQYELLGETLDDAAGEAFDKTAKMMGMQYPGGPEISKAAMQGVAGRFVFPRPMTDRPGLEFSFSGLKTSALNTWQQCRNAGDDSEQTRCDIALAFQQAVVETLTIKCKRALKQTGLKSLVIAGGVSANKALRASLESMLGDLRGHVYYARPEFCTDNGAMIAFAGCQRLQVGQKEDLSISVQARWPMEQ
type: DOMAIN
name: Gcp-like_dom
description: Gcp-like domain