nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MLVVKADYKKYPIPVLEKMRIDEDEFYKKYEACVVVQTCNRIEAYFDTEVNSNVDDILKDFQGFDILKGKNATFHFLKVSCGMDSMILGENQILGQIKTSFQKAREFKKTSRYLDSLFLKAIHVGQRARTETKINEGGVSIGSAAVELAEKNFGLTNRNVLLIGAGEIGTLVAKALVEKHIKAVIVANRTYERAETLAKELKGMAVHFDKLREAVNFSDVIICATSSPHYILEKEDLIDVGNKIIIDIANPRDVDDSVRELENIELYTIDDLRNISDKNLQRRIEEIPTVEKIIEEEYDVLMKQIEKINVEEVLKEFNTYIEEIRVKELEKAIKLSKSKDPEEIMENFSKAFAKRITHDFVSYSLNTSKEDLMNSAWWKNGK

Annotated regions:
phrase: HFLKVSCGMDSMILGENQILGQI
type: CONSERVED_SITE
name: GluRdtase_CS
description: Glutamyl-tRNA reductase, conserved site

phrase: VEKIIEEEYDVLMKQIEKINVEEVLKEFNTYIEEIRVKELEKAIKLSKSKDPEEIMENFSKAFAKRITHDFV
type: DOMAIN
name: 4pyrrol_synth_GluRdtase_dimer
description: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain

phrase: ADYKKYPIPVLEKMRIDEDEFYKKYEACVVVQTCNRIEAYFDTEVNSNVDDILKDFQGFDILKGKNATFHFLKVSCGMDSMILGENQILGQIKTSFQKAREFKKTSRYLDSLFLKAIHVGQRARTE
type: DOMAIN
name: 4pyrrol_synth_GluRdtase_N
description: Glutamyl-tRNA reductase, N-terminal

phrase: ELAEKNFGLTNRNVLLIGAGEIGTLVAKALVEKHIKAVIVANRTYERAETLAKELKGMAVHFDKLREAVNFSDVIICATSSPHYILEKEDLIDVGNKIIIDIANPRDVDDSVRELENIELYTIDDLRN
type: DOMAIN
name: Shikm_DH/Glu-tRNA_Rdtase
description: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase
Protein sequence:
MKTLLLTLVVLTIACLDLGYTKTCFNDDLANPKTTELCRHSMYFCFKNSWIAGGVERIERGCSLTCPDIKYNGKYIYCCTRDNCNA

Annotated regions:
phrase: GCSLTCPDIKYNGKYIYCCTR
type: CONSERVED_SITE
name: Snake_toxin_con_site
description: Snake toxin, conserved site
Protein sequence:
MAEITTREKLHEVALSAPKTSGVYLWKDKAGTVIYVGKAKSLKNRLSSYFTSNRDIKTRILVSRAESIEYIQTENEYEALLLENTLIKKHKPRYNINLKDGKTYPVLKLTNEEFPKVYRTRNIKNDGSKYFGPFPNVSAVDMFLTLIKHNYTLRQCKQLKKRETPCLYFHIGRCKAPCCGKISAEEYGKDIEEITLLLEGEMEDVSGTLKEKMKEAAEKKEFEKAARLRDGIQAVYALRGQNIVQDMDPESRDYIAWAFEGAMVSIAVLKMRNGRLVGRDLYRSHSLKEEGEILSEFISAYYTSANEVPPKIFIPQAAEGNALIEKWLNEELHAKTRISIIPLEKESLAAEERSAADSLTEIEEAASKTIGYAVKEPAPLSAQEEKLNLSPAEIKHHKAALKMARFNAKEDAMRRLREQGDFAAVEDLQKRLNLPCLPQRIEGFDIAHLGGTFTVAALISFKEGNPDKKNYRIFRLKNTDGVIDDYASMREVIARRYTRLLNEGADLPDLILIDGGIGQVNAASKIVDALDLGIPVIGLAEKNEEVYFPHNSKPVILPRRSDALRLLQRIRDEAHRFSNTRNNKLRRANKLKTEFENLPHIGKKRAHVLLKAFGSTENLKTLTAQALSETAKISLKQAEEVLDAVKTTNNNN

Annotated regions:
phrase: GVYLWKDKAGTVIYVGKAKSLKNRLSSYFTSNRDIKTRILVSRAESIEYIQTENEYEALLLENTLIKKHKPRY
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: APKTSGVYLWKDKAGTVIYVGKAKSLKNRLSSYFTSNRDIKTRILVSRAESIEYIQTENEYEALLLENTLIKKHKPRYN
type: DOMAIN
name: GIY-YIG_UvrC_Cho
description: UvrC/Cho-like, GIY-YIG domain

phrase: EDVSGTLKEKMKEAAEKKEFEKAARLRDGIQAVYA
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: KTSGVYLWKDKAGTVIYVGKAKSLKNRLSSYFTSNRDIKTRILVSRAESIEYIQTENEYEALLLENTLIKKHKPRYN
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: QKRLNLPCLPQRIEGFDIAHLGGTFTVAALISFKEGNPDKKNYRIFRLKNTDGVIDDYASMREVIARRYTRLLNEGADLPDLILIDGGIGQVNAASKIVDALDLGIPVIGLAEKNEEVYFPHNSKPVILPRRSDALRLLQRIRDEAHR
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: TLKEKMKEAAEKKEFEKAARLRDGIQA
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: YIAWAFEGAMVSIAVLKMRNGRLVGRDLYRSHSLKEEGEILSEFISAYYTSANEVPPKIFIPQAAEGNALIEKWLNEELHAKTRISIIPLEKESLAAEERSAADSLTEIEEAASKTIGYAVKEPAPLSAQEEKLNLSPAEIKHHKAALKMARFNAKEDAMRRLREQGDFAAVEDLQKRLNLPCLPQRIEGFDIAHLGGTFTVAALISFKEGNPDKKNYRIFRLKNTDGVIDDYASMREVIARRYTRLLNEGADLPDLILIDGGIGQVNAASKI
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: TSGVYLWKDKAGTVIYVGKAKSLKNRLSSYFTSNRDIKTRILVSRAESIEYIQTENEYEALLLENTLIKKHKPRYNINLK
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease
Protein sequence:
MAGVLGMILAGGEGSRLRPLTESRTKPAVPFGGSYRLIDFALNNFVNADLMRIYVLTQFKSQSLFQHMKKGWNVNGITDRFIDPVPAQMRTGKRWYEGTADAIYQNISFIESTDPEHVCIFGSDHIYKMDIRQMLDFHKKKKAALTVSALRMPAKDASGFGVIEVDEHGKMIGFEEKPSNPKCIPGQPGIALVSMGNYIFEAESLCKELIHDAALEDSSHDFGKDIIPKMFPEGNVYVYDFSTNHIKGEKKEVYWRDVGTIESYWEAHMDLLKKDAPFSLYNRKWPLHTYYPPLPPATFSDSDNGRVQIIDSLVCGGSYIRGSRIEKSVLGFRSNIASACDISESILLGNVKVGKGCVLRRVIVDKGADIAPGTEIGVNLQEDKKRYHVSDEGIVVIPKGERVGY

Annotated regions:
phrase: AGGEGSRLRPLTESRTKPA
type: CONSERVED_SITE
name: ADP_Glu_pyroP_CS
description: ADP-glucose pyrophosphorylase, conserved site

phrase: VSMGNYIFEA
type: CONSERVED_SITE
name: ADP_Glu_pyroP_CS
description: ADP-glucose pyrophosphorylase, conserved site

phrase: WYEGTADA
type: CONSERVED_SITE
name: ADP_Glu_pyroP_CS
description: ADP-glucose pyrophosphorylase, conserved site

phrase: PPATFSDSDNGRVQIIDSLVCGGSYIRGSRIEKSVLGFRSNIASACDISESILLGNVKVGKGCVLRRVIVDKGADIAPGTEIGVNLQEDKKRYHVSDEGIVV
type: DOMAIN
name: GlmU/GlgC-like_hexapep
description: Glucose-1-phosphate adenylyltransferase/Bifunctional protein GlmU-like, C-terminal hexapeptide

phrase: GMILAGGEGSRLRPLTESRTKPAVPFGGSYRLIDFALNNFVNADLMRIYVLTQFKSQSLFQHMKKGWNVNGITDRFIDPVPAQMRTGKRWYEGTADAIYQNISFIESTDPEHVCIFGSDHIYKMDIRQMLDFHKKKKAALTVSALRMPAKDASGFGVIEVDEHGKMIGFEEKPSNPKCIPGQPGIALVSMGNYIFEAESLCKELIHDAALEDSSHDFGKDIIPKMFPEGNVYVYDFSTNHIKGEKKEVYWRDVGTIESYWEAHMDLL
type: DOMAIN
name: NTP_transferase_dom
description: Nucleotidyl transferase domain
Protein sequence:
MTLFETDAPTAAELDARDPLREYRDRFLGADDPEIRAYLDGNSLGRPTKGLPEKIAAFVTDQWGARLIRGWDEQWLDLPVQLGDRIARETLGAAAGQTVVADSTTVSLYKLIRTALHARPGRTEIVIDRGNFPTDRFVVEGVAEETGSVIRWIETDPGAGVTLAEADAVIGENTAVIVLSQIAYRSGYIADVPGITALAHERGALVLWDLCHSVGAIPISLDEWGVDLATGCTYKYLNGGPGSPAFLYVNQALLASARQPIWGWMGDRAPFDMADGYQPAPSIRRFISGTPPIMGMIAMQEMLDLIAEAGIDAIRTKSLALSDYAIALYDERLAPLGVELSTPREHAVRGSHVTVDHPRFSGLMHALWAKGVIPDFRAPSGIRIGLSPLSTSFEEVEIVIDAIHALLTEADASTPVDSTKGA

Annotated regions:
phrase: ETLGAAAGQTVVADSTTVSLYKLIRTALHARPGRTEIVIDRGNFPTDRFVVEGVAEETGSVIRWIETDPGAGVTLAEADAVIGENTAVIVLSQIAYRSGYIADVPGITALAHERGALVLWDLCHSVGAIPISLDEWGVDLATGCTYKYLNGGPGSPAFLYVNQALLASARQPIWGWMGDRAPFDMADGYQPAPSIRRFISGTPPIMGMIAMQEMLDLIAEAGIDAIRTKSLALSDYAIA
type: DOMAIN
name: Aminotrans_V_dom
description: Aminotransferase class V domain
Protein sequence:
MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLNRKMNDSNSAGAGGPVKITENRSKKTSFFRCSLL

Annotated regions:
phrase: YLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEA
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain
Protein sequence:
MSLTENLQLLLNLDSLPSKRENLIKRKECGLTIMLCGASGTGKTTFFNTLFATSLQPEKSYETAKETIAKKTLEVKKNKAVIEEDGFHINLTVLDTPGFGDFIDNTSCWNTVAEYLDEQHERYLIHDQNSLRVPRKDTRVHVCLYFITPVSFGMLPLDVLAMKELSTHVNLVPVIAKADTFTTPELTQIKQKIRRILEAQSIDVFHPSTEYSDYETAELLDSSLPYAIISSVNEVCKDDGEKSQGRRYPWGTSEIYEETHCDFLKLKKLLINRHMLELINTTETNIYERYRREQLTNRKSGIPKLKKEHYERLNNEKRAIQQKITQMTNETESFFQAKEEKMIETRDALNSELSEYHERIRALETQIESLKSYKGRGHKK

Annotated regions:
phrase: KECGLTIMLCGASGTGKTTFFNTLFATSLQPEKSYETAKETIAKKTLEVKKNKAVIEEDGFHINLTVLDTPGFGDFIDNTSCWNTVAEYLDEQHERYLIHDQNSLRVPRKDTRVHVCLYFITPVSFGMLPLDVLAMKELSTHVNLVPVIAKADTFTTPELTQIKQKIRRILEAQSIDVFHPSTEYSDYETAELLDSSLPYAIISSVNEVCKDDGEKSQGRRYPWGTSEIYEETHCDFLKLKKLLINRHMLELINTTETNIYERYRREQLT
type: DOMAIN
name: G_SEPTIN_dom
description: Septin-type guanine nucleotide-binding (G) domain

phrase: KECGLTIMLCGASGTGKTTFFNTLFATSLQPEKSYETAKETIAKKTLEVKKNKAVIEEDGFHINLTVLDTPGFGDFIDNTSCWNTVAEYLDEQHERYLIHDQNSLRVPRKDTRVHVCLYFITPVSFGMLPLDVLAMKELSTHVNLVPVIAKADTFTTPELTQIKQKIRRILEAQSIDVFHPSTEYSDYETAELLDSSLPYAIISSVNEVCKDDGEKSQGRRYPWGTSEIYEETHCDFLKLKKLLINRHMLELINTTETNIYERYRREQLTNRK
type: DOMAIN
name: G_SEPTIN_dom
description: Septin-type guanine nucleotide-binding (G) domain
Protein sequence:
MDNYEYTELLKNLSKKMSNITGVVEPDKLYKRVAQIDELENSQDFWNDSSNAALVQKDKTQCERKLKKYNLAKNAIDDAKELYEMAKEENDEDLIAECFNGAQHIEDLIRTMEIEVLLSEETDGNNAILSIHPGAGGTESQDWASILLRMYKRFAERRGWSVEVLDYQAGDEAGIKDVSLLISGENAYGYLKVENGIHRLVRISPFDSNAKRHTSFSSVMVSPEVDDDINIVIEDRDIRVDTYRSSGAGGQHVNKTESAIRITHIATGVVVQCQNDRSQHKNRATAMKMLKSRLYELELENQKAEIAGIAKSEIGWGHQIRSYVMQPYQQIKDTRSNIAYSNVSAILDGDIDKMIEDVLISQNRS

Annotated regions:
phrase: DDINIVIEDRDIRVDTYRSSGAGGQHVNKTESAIRITHIATGVVVQCQNDRSQHKNRATAMKMLKSRLYELELENQKAEIAGIAKSEIGWGHQIRSYVMQPYQQIKDT
type: DOMAIN
name: Pep_chain_release_fac_I
description: Peptide chain release factor class I

phrase: RSSGAGGQHVNKTESA
type: DOMAIN
name: Pep_chain_release_fac_I
description: Peptide chain release factor class I

phrase: EMAKEENDEDLIAECFNGAQHIEDLIRTMEIEVLLSEETDGNNAILSIHPGAGGTESQDWASILLRMYKRFAERRGWSVEVLDYQAGDEAGIKDVSLLISGENAYGYLKV
type: DOMAIN
name: PCRF
description: Peptide chain release factor

phrase: KRVAQIDELENSQDFWNDSSNAALVQKDKTQCERKLKKYNLAKNAIDDAKELYEMAKEENDEDLIAECFNGAQHIEDLIRTMEIEVLLSEETDGNNAILSIHPGAGGTESQDWASILLRMYKRFAERRGWSVEVLDYQAGDEAGIKDVSLLISGENAYGYLKVENGIHRLVRISPFDSNAKRHTSFSS
type: DOMAIN
name: PCRF
description: Peptide chain release factor
Protein sequence:
MRTHDPLFTRLLPKFLYVIAILALADTVLDSVPGVGPALEFIFLWIIPLPSIDWLTAVVLFLLAAGVHKRKRAAWTALTVMTVLAALLHALVLIVALQDEDLADMRSFLIVNVATLLVLIVLLTVYRRSYTVRSQPGNSRRALVVFLILAGCVTLAAIGTKFAISGIGIEQLSGLLAGNASPQWLVSLLGFGWAVSFLIAFGMLLRSQKEIAQMTTEEESRVRTLLAEHPADSLGYFATRRDKSALLTNDSAVVYRVAKGVALASGDPLGDPSTWPSAARAFVRRAAEFGWTPAVIGVSEAGARAYADAGLRALHIGDEAVLDFARVRIDDMPEVRRPVRRLKELGYTVRIRRHRSIPADELSALADLAQEWLGGEAERGFSMALGRLGDPSDGDCMMVEALFPGGDERGEVAALLSFAPWGADGLSLDVMRRHPEADNGVTELMVVSLIADGVELGVTRASLNFAVFRSAFVEGERIGAGPVRRLWRRLLLLASHWWQLESLYRSNAKYNPGWHPRMICYPDGGDLARVAFAMGVAEGFVSPPAWFSSATDIQQPRRDDEDSARLAAISMGSVSTAPPRRRTKQFGSRLGSRQAMLAQGLEPYPPLVQVDSSCADARDYCAVAGRVLAVRNHGGVVFADLRDRSGDLQAILERSGAGADAVGRFQRLVRSGDQVMVSGKVGASRNGTRSLLVQDWAMTSKALRPLPDKRRGIRDPETRVRQRHLALIVDPREREMVVARAHAIQAVREELLARDYLEVETPILQPVH

Annotated regions:
phrase: VAGRVLAVRNHGGVVFADLRDRSGDLQAILERSGAGADAVGRFQRLVRSGDQVMVSGKVGASRNGTRSLLVQD
type: DOMAIN
name: NA-bd_OB_tRNA
description: OB-fold nucleic acid binding domain, AA-tRNA synthetase-type

phrase: FLYVIAILALADTVLDSVPGVGPALEFIFLWIIPLPSIDWLTAVVLFLLAAGVHKRKRAAWTALTVMTVLAALLHALVLIVALQDEDLADMRSFLIVNVATLLVLIVLLTVYRRSYTVRSQPGNSRRALVVFLILAGCVT
type: DOMAIN
name: tRNA-synt_2_TM
description: Lysyl-tRNA synthetase, N-terminal transmembrane region

phrase: AVAGRVLAVRNHGGVVFADLRDRSGDLQAILERSGAGADAVGRFQRLVRSGDQVMVSGKVGASRNGTRSLLVQDWAMTSKALRPLPDKRRGIRDPETRVRQRHLA
type: DOMAIN
name: Lys-tRNA-ligase_II_N
description: Lysine-tRNA ligase, class II, N-terminal

phrase: PETRVRQRHLALIVDPREREMVVARAHAIQAVREELLARDYLEVETPILQP
type: DOMAIN
name: Aa-tRNA-synt_II
description: Aminoacyl-tRNA synthetase, class II (D/K/N)

phrase: TLLAEHPADSLGYFATRRDKSALLTNDSAVVYRVAKGVALASGDPLGDPSTWPSAARAFVRRAAEFGWTPAVIGVSEAGARAYADAGLRALHIGDEAVLDFARVRIDDMPEVRRPVRRLKELGYTVRIRRHRSIPADELSALADLAQEWLGGEAERGFSMALGRLGDPSDGDCMMVEALFPGGDERGEVAALLSFAPWGADGLSLDVMRRHPEADNGVTELMVVSLIADGVELGVTRASLNFAVFRSAFVEGERIGAGPVRRLWRRLLLLASHWWQLESLYRSNAKYNPGWHPRMIC
type: DOMAIN
name: LPG_synthase_C
description: Phosphatidylglycerol lysyltransferase, C-terminal
Protein sequence:
MTDLTGILYIVATPIGNLQDITQRALETFAQVDLIAAEDTRHSGLLLSHYGIKKPFFALHDHNEQEKAHILVEKLKQGSNIALISDAGTPLISDPGFHLVRQCREAGIRVVPLPGACAAITALCASGIASDRFCFEGFLPAKSKARKDKLENIAEEDRTLIFYESTHRILDTLEDMQAVLGEERYIVLAREMTKTWETITGNTIKNLREWLLEDPNRTKGEMVLIVEGKPKSDNNDEISPQAVKALELIAEELPLKKAAAIVAELYGYKKNALYQFGLAHLEK

Annotated regions:
phrase: EISPQAVKALELIAEELPLKKAAAIVAELYGYKKNALYQFGL
type: DOMAIN
name: RsmI_HTH
description: RsmI, HTH domain

phrase: LYIVATPIGNLQDITQRALETFAQVDLIAAEDTRHSGLLLSHYGIKKPFFALHDHNEQEKAHILVEKLKQGSNIALISDAGTPLISDPGFHLVRQCREAGIRVVPLPGACAAITALCASGIASDRFCFEGFLPAKSKARKDKLENIAEEDRTLIFYESTHRILDTLEDMQAVLGEERYIVLAREMTKTWETITGNTIKN
type: DOMAIN
name: 4pyrrol_Mease
description: Tetrapyrrole methylase

phrase: SDAGTPLISDP
type: CONSERVED_SITE
name: SAM_MeTrfase_RsmI_CS
description: SAM-dependent methyltransferase RsmI, conserved site
Protein sequence:
MAQMYFYYSAMNAGKSTTLLQSSFNYRERGMRPVIFTAAIDDRFGTGKVSSRIGLEEDAELYNKSDDLWSKLSMMHADTHIDCVLIDECQFLTKEQVYQLTEVVDKLHIPVLCYGLRSDFRGELFDGSRYLLSWADKLVELKTICHCGRKANMVIRQDEAGHAIADGDQVEIGGNDRYVSVCRKHYKEALGR

Annotated regions:
phrase: GGNDRYVSVCRKH
type: CONSERVED_SITE
name: Thymidine_kinase_CS
description: Thymidine kinase, conserved site
Protein sequence:
MSKLSLSSLDKTHLEGKKVLVRVDFNVPLNEDGQITDDTRIRAAIPTIEYLINHSAKVILAAHFGRPKGQVNEKMRLTPVAARLSELLGQNVALTNSCIGDEAVAQSNSLSNGDVLLLENVRFFGEEEKNDLEFAEKLASHADMYVNDAFGAAHRAHASTQGVTNYLSPSVAGFLLEKELKYLQGAVDSPNRPLAAIVGGSKVSSKIGVLDSLLDKCDKIMIGGGMIFTFYKARGLDVGKSLVEEDKLELAKDLEAKAKAKGVELLLPTDVVLADEFSPDANSKISQIDAISGNWMGLDIGPDSIKVFQNALAECKTIIWNGPMGVFEFDKFADGTNAIATTLADLSAFSEVCTIIGGGDSVAAVEKAGLAEKMSHISTGGGASLELLEGKTLPGVAALNDA

Annotated regions:
phrase: KVLVRVDFNV
type: CONSERVED_SITE
name: Phosphoglycerate_kinase_CS
description: Phosphoglycerate kinase, conserved site
Protein sequence:
MRRLSNKGEHQRNLNDRQRKVLYCIVKEYIENKKPVSSQRVLEVSNINFSSATIRNDMKKLEYLGYIYQPHTSAGRVPTDKGLRFYYEEMVKLSKETEELNLEVDTFRSIPLADPEKVLLLAGNLLARLAEGYVLIERPNPRDLKILRVMLIPVSEDYLIFSILTEFGISKITPIRIHEDLNWEEIERQLNFLLRGRTVEDVLTGKVETLRGSGILKLIESVMNEKLERYIDVGFENLLKDDTLSLEDIKHLLEEIKDHRFLESLIGNDKDVTVKIGKEIGSKKLERFAVFSGRYYKGSSPIGSVHLFTSKITRYDRNHRVFNYVLNRLSEYFTSAARR

Annotated regions:
phrase: LNDRQRKVLYCIVKEYIENKKPVSSQRVLEVSNINFSSATIRNDMKKLEYLGYIYQPHTSAGRVPTD
type: DOMAIN
name: WHTH_HrcA_DNA-bd
description: Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain

phrase: EKVLLLAGNLLARLAEGYVLIERPNPRDLKILRVMLIPVSEDYLIFSILTEFGISKITPIRIHEDLNWEEIERQLNFLLRGRTVEDVLTGKVETLRGSGILKLIESVMNEKLERYIDVGFENLLKDDTLSLEDIKHLLEEIKDHRFLESLIGNDKDVTVKIGKEIGSKKLERFAVFSGRYYKGSSPIGSVHLFTSKITRY
type: DOMAIN
name: HrcA_C
description: Heat-inducible transcription repressor HrcA, C-terminal
Protein sequence:
MVNSSPVPGALAIFGTASDVGKSIVATALCRMFSNAGIDVAPYKAQNMSNNSGVTPDGCEIGRAQIAQAEAARVVPTADMNPVLLKPNSDTGAQIVLQGKVCSTETAKGYFLDTSLWAEAARKSLDQLMQRHELVVIEGAGSCAEMNLYDRDFVNFRTARISGAPVILVADIDRGGVFAQVVGTLAVLPPEDRALVKGVIINRFRGDIDLFRDGVKLIETLAGIPVLGVIPYFRGFRIDAEDAVPLSSKVDPSGAPEKGRIAVAAIYFPHISNFTDLSPLELDPKVELHYLHFPRSLRGYQALILPGTKNVRGDLDWLTSLGWAEKIREFRRDGGLIMGICGGYQMLGATIADPSGVEGEPGESAGLGMLPVHTVLEEEKCLSNAIGNIQGESIAVSGYEIHMGRTTSNGDCSSFLRVTARNNRPADDVDGVITPDGKVIGTYFHGIIDEPEVRCWFLRQIDPAYTPDAEERGRQESYDLLADHFSGYLDIPKLYEIIQRPCPNP

Annotated regions:
phrase: VAAIYFPHISNFTDLSPLELDPKVELHYLHFPRSLRGYQALILPGTKNVRGDLDWLTSLGWAEKIREFRRDGGLIMGICGGYQMLGATIADPSGVEGEPGESAGLGMLPVHTVLEEEKCLSNAIGNIQGESIAVSGYEIHMGRTTSNGDCSSFLRVTARNNRPADDVDGVITPDGKVIGTYFHGIIDEP
type: DOMAIN
name: GATase_3
description: CobB/CobQ-like glutamine amidotransferase

phrase: LAIFGTASDVGKSIVATALCRMFSNAGIDVAPYKAQNMSNNSGVTPDGCEIGRAQIAQAEAARVVPTADMNPVLLKPNSDTGAQIVLQGKVCSTETAKGYFLDTSLWAEAARKSLDQLMQRHELVVIEGAGSCAEMNLYDRDFVNFRTARISGAPVILVADIDRGGVFAQVVGTLAVLPPEDRALVKGVIINRFRGDIDLFRDGVKLIETLAGIPVLGVIPYFRG
type: DOMAIN
name: CobQ/CobB/MinD/ParA_Nub-bd_dom
description: CobQ/CobB/MinD/ParA nucleotide binding domain

phrase: VAAIYFPHISNFTDLSPLELDPKVELHYLHFPRSLRGYQALILPGTKNVRGDLDWLTSLGWAEKIREFRRDGGLIMGICGGYQMLGATIADPSGVEGEPGESAGLGMLPVHTVLEEEKCLSNAIGNIQGESIAVSGYEIHMGRTTSNGDCSSFLRVTARNNRPADDVDGVITPDGKVIGTYFHGIIDEPEVRCWF
type: DOMAIN
name: CobQ_GATase1
description: Cobyric acid synthase, glutamine amidotransferase type 1

phrase: ALAIFGTASDVGKSIVATALCRMFSNAGIDVAPYKAQNMSNNSGVTPDGCEIGRAQIAQAEAARVVPTADMNPVLLKPNSDTGAQIVLQGKVCSTETAKGYFLDTSLWAEAARKSLDQLMQRHELVVIEGAGSCAEMNLYDRDFVNFRTARISGAPVILVADIDRGGVFAQVVGTLAVLPPEDRALVKGVIINRFRGDIDLFRDGVKLIETLAGIPVLGVI
type: DOMAIN
name: CobQ_N
description: Cobyric acid synthase, N-terminal domain
Protein sequence:
MLPTRHRMRTSAHFSTTVRSGARGGRRNVVVSVRLSTGAPSRVGFVVSKAVGNAVTRNKVKRRLRELSAETVRERPEGMDLVVRALPPAATAPWDELARDYRSAVATAVRRCA

Annotated regions:
phrase: VGNAVTRNKVKRRL
type: CONSERVED_SITE
name: RNase_P_CS
description: Ribonuclease P, conserved site
Protein sequence:
MEIQIHLQRVAQDIGISDLTSFDLAEALDDADPLKFLRNEFAYPKMRTLPHVDLLLVNANDDAIYMCGNSLGLMPKGTKHLMDEQFEKWANMGVFGHFQEPLAWAKSDQSVLDSIAELVGAQRTEVALMNSLTVNLHILLTAFYKPTPKRHKIFIESKAFPSDHYAIESQIRLKGFTVEESLICVYPRTGDDCIRNEDIIALIEEQGDTIAIIWFSAIHYYTGQLFDIRKITKSGHDKASGCLVGWNLAHAFANIPLSLHEWDVDFACWCTYKYSCSGAGGIGGFFVHKRFETDKRKRMVGWWGHKEETRFIMNNQLELDNGAAGYRISNPPMMLMVPLIAFLEVLSKTTMQDLRTKSLLLTGYLEYLINHFLSPSSLNRRTKKVMCTIMTPSDPEQRGCQLSLKFNIDISLVYKELVKRGVAVDKRYPDVIRVTPVHLYNSYTDVHRFMRALLDSLIVVEGDYEK

Annotated regions:
Protein sequence:
MEDIANPERTKKILKRYGFKFKKSLGQNFLTNITILKQIVEAGEITKDDDVIEIGPGIGSLTEQIARKAHQVLSFEIDDRLIPVLKDTLNHYHNVTVLNQDILEADLPTLIAKHFDGQHNLKIVANLPYYITTPIMLHLLEAGLPIDRMVLMMQKEVAERIDAAPGSKAYGSLSIAVQLHSEVKLAFIVPKTAFVPQPNVDSAIVEFVGRQEPLVTVQNQQLFDQLVRGAFAQRRKTLWNNLQNQFGKQEEVKAGLVAALDQADIAPSTRAEQLSIQQFAQLSDCLNEQPVFAKKRG

Annotated regions:
phrase: ILKQIVEAGEITKDDDVIEIGPGIGSLTEQIARKAHQVLSFEIDDRLIPVLKDTLNHYHNVTVLNQDILEADLPTLIAKHFDGQHNLKIVANLPYYITTPIMLHLLEAGLPIDRMVLMMQKEVAERIDAAPGSKAYGSLSIAVQLHSEVKLAFIVPKTAFVPQPNVDSAIVEFVGR
type: DOMAIN
name: rRNA_Ade_methylase_Trfase_N
description: Ribosomal RNA adenine methylase transferase, N-terminal

phrase: VIEIGPGIGSLTEQIARKAHQVLSFEI
type: CONSERVED_SITE
name: rRNA_Ade_Mease_Trfase_CS
description: Ribosomal RNA adenine methylase transferase, conserved site
Protein sequence:
MPELPEVETVRRELEKRIVGQKIVSIEATYPRMVLTGFEQLKKELTGKTIHGISRRGKYLIFEIGEKDRLISHLRMEGKYRLASLNVPMEKHDHLALKFTDEQLIYADVRKFGTWELISTDQVLPYFLKKNIGPEPTYETFDEQIFREKLQKSTKKIKPFLLEQTLVAGLGNIYVDEVLWLAKIHPEKVANQLTESSIHLLHDSIIEILQKAIKLGGSSIRTYSALGSTGKMQDELRVYGKTGEKCVRCGNEIQKIKVAGRGTHFCPFCQQK

Annotated regions:
phrase: CVRCGNEIQKIKVAGRGTHFCPFC
type: BINDING_SITE
name: DNA_glyclase_Znf_dom_DNA_BS
description: DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site

phrase: RVYGKTGEKCVRCGNEIQKIKVAGRGTHFCPFCQ
type: DOMAIN
name: Znf_DNA_glyclase/AP_lyase
description: Zinc finger, DNA glycosylase/AP lyase-type

phrase: IGPEPTYETFDEQIFREKLQKSTKKIKPFLLEQTLVAGLGNIYVDEVLWLAKIHPEKVANQLTESSIHLLHDSIIEILQKAIKLGGSSIRTY
type: DOMAIN
name: DNA_glyclase/AP_lyase_DNA-bd
description: DNA glycosylase/AP lyase, H2TH DNA-binding

phrase: PELPEVETVRRELEKRIVGQKIVSIEATYPRMVLTGFEQLKKELTGKTIHGISRRGKYLIFEIGEKDRLISHLRMEGKYRLASLNVPMEKHDHLALKFTDEQLIYADVRKF
type: DOMAIN
name: FPG_cat
description: Formamidopyrimidine-DNA glycosylase, catalytic domain

phrase: IGPEPTYETFDEQIFREKLQKSTKKIKPFLLEQTLVAGLGNIYVDEVLWLAKIHPEKVANQLTESSIHLLHDSIIEILQKAIKLGGSSIRT
type: DOMAIN
name: DNA_glyclase/AP_lyase_DNA-bd
description: DNA glycosylase/AP lyase, H2TH DNA-binding

phrase: PELPEVETVRRELEKRIVGQKIVSIEATYPRMVLTGFEQLKKELTGKTIHGISRRGKYLIFEIGEKDRLISHLRMEGKYRLASLNVPMEKHDHLALKFTDEQLIYADVRKFGTW
type: DOMAIN
name: FPG_cat
description: Formamidopyrimidine-DNA glycosylase, catalytic domain

phrase: MPELPEVETVRRELEKRIVGQKIVSIEATYPRMVLTGFEQLKKELTGKTIHGISRRGKYLIFEIGEKDRLISHLRMEGKYRLASLNVPMEKHDHLALKFTDEQLIYADVRKFGT
type: DOMAIN
name: FPG_cat
description: Formamidopyrimidine-DNA glycosylase, catalytic domain

phrase: GEKCVRCGNEIQKIKVAGRGTHFCPFCQ
type: DOMAIN
name: Znf_FPG/IleRS
description: Zinc finger, FPG/IleRS-type
Protein sequence:
MQGTLSVWLAKRGLVHRSLGFDYQGIETLQIKPEDWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVHQAEEVCIKVFTHRSNPRIPSVFWVWKSTDFQERESYDMLGITYDSHPRLKRILMPESWIGWPLRKDYIAPNFYEIQDAY

Annotated regions:
phrase: QIKPEDWHSIAVILYVYGYNYLRSQCAYDVAPGGLLASVYHLTRIEYGVHQAEEVCIKVFTHRSNPRIPSVFWVWKSTDFQERESYDMLGITYDSHPRLKRILMPESWIGWPLRKDYI
type: DOMAIN
name: NADH_UbQ_OxRdtase_30kDa_su
description: NADH:ubiquinone oxidoreductase, 30kDa subunit

phrase: ERESYDMLGITYDSHPRLKRI
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_CS
description: NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site
Protein sequence:
MDNCPPASTFLTDSLELELQTEWCNPPCFSCDFDNRGGGKHFSGESYLSSGALKRVILNLDPLPTNFEEDTVEIFGIEWVTETALVNSSRVLFHLFRQQLYNLETLLQASCDFGKISTLHCKAHNIRQLCVTFLHYVKVFIFRSLQVRNAESHVPVHPYETLEAQLPSVLVDELHGLLLYIGHLSELPTTNTGAFVNQNQTKLYPPSWHLLHLHLDIHWLVLEILHMLGEKLKQVVYSHQFMNLAGDNLTNVSLFEEHCENLLCDLINLSLNRYDKKVRPSEALMSHHCPCPCIKELWVLLIHLLNHRSKWSLSESFWNWLNKLLKTLLEKSNDQRRSVLIVQPRDPLGFSWWIITHVASFYQFDRHGTPDEMRQMESNWNFVEELLKKSISVQDGILEEQLRMYLHCCLTLCDFWEPNIAIVTILWEYYSKNLNSSFSISWLPLKGLTYIIKSPLSMLEMVKTCCCDKQDHDLYKSSSSYTIFLCILAKVVKKAMKNNGPHPWKQVKGRIYSKFHQKRMEELTEVGLQNFFSLFLLLAAVAEVEDVASHVLRLLDFLKPTFKTSPLIWKGQMAFLLMYTQKNLDIGVLAEKFSNAFREKAKEFLVSKNDEMGQRQTLWTLLSIYMDSVQEVFETSRCLHPSHEKLLNDGFSMLLRACQESELRTVLNFLQAVLARIRSLHQQLRQELQREHGDLSVQSSLSTKERHLAAVASALWRHFFSFLKSQRMSQIVPLSQLADAAADFTLLAMDLPSTAPSDLQPQPVTSMIQLFGWDDIIWPQVVARYLSHFLQNSMLCEALSHSGCVSFQALTVRSWIRCILQMYVKNLHVPDDSFIDINPEQAVEKDYMEQLTELTRLLFKLSEVKNIFSKSQVELPIPDDPKKALIRFFEAVGITYGNLQTVSDKSAMVTKSLEYLGEILKYIKPYLGKKVSSAGLQLTYTMMGTLVKSWALIFATSKAQKLLFRIIDCLLLPHTVLQQEKELPAPMLTAIQKSLPLYLQGMCIVCCQSQNTNAYLNQLLGNVIEQYIGRFLPASAHVLGLGQHPVLLALKNSASVPPMSLLKKCIVHVIRKSYFEFKGSLLPPRLASILAFILQLVKETNTDVSEIELLLPGVLKCLLLVSEPQVKRLATENLQCMVRACQVGSGGEPAAQLTSVFRQFIEDYGMRYDYQIYSILEAVAALDQQVVIHLVPTLTQSLKNSERKWGLGRNSAQREAYSKLLSQLGQVGQDEIQRLENDHIESML

Annotated regions:
phrase: PPCFSCDFDNRGGGKHFSGESYLSSGALKRVILNLDPLPTNFEEDTVEIFGIEWVTETALVNSSRVLFHLFRQQLYNLETLLQASCDFGKISTLHCKAHNIRQLCVTFLHYVKVFIFRSLQVRNAESHVPVHPYETLEAQLPSVLVDELHGLLLYIGHLSELPTTNTGAFVNQNQTKLYPPSWHLLHLHLDIHWLVLEILHMLGEKLKQVVYSHQFMNLAGDNLTNVSLFEEHCENLLCDLINLSLNRYDKKVRPSEALMSHHCPCPCIKELWVLLIHLLNHRSKWSLSESFWNWLNKLLKTLLEKSNDQRRSVLIVQPRDPLGFSWWIITHVASFYQFDRHGTPDEMRQMESNWNFVEELLKKSISVQDGILEEQLRMYLHCCLTLCDFWEPNIAIVTILWEYYSKNLNSSFSISWLPLKGLTYIIKSPLSMLEMVKTCCCDKQDHDLYKSSSSYTIFLCILAKVVKKAMKNNGPHPWKQVKGRIYSKFHQKRMEELTEVGLQNFFSLFLLLAAVAEVEDVASHVLRLLDFLKPTFKTSPLIWKGQMAFLLMYTQKNLDIGVLAEKFSNAFREKAKEFLVSKNDEMGQRQTLWTLLSIYMDSVQEVFETSRCLHPSHEKLLNDGFSMLLRACQESELRTVLNFLQAVLARIRSLHQQLRQELQREHGDLSVQSSLSTKERHLAAVASALWRHFFSFLKSQRM
type: DOMAIN
name: MMS22L_N
description: Protein MMS22-like, N-terminal

phrase: EQLTELTRLLFKLSEVKNIFSKSQVELPIPDDPKKALIRFFEAVGITYGNLQTVSDKSAMVTKSLEYLGEILKYIKPYLGKKVSSAGLQLTYTMMGTLVKSWALIFATSKAQKLLFRIIDCLLLPHTVLQQEKELPAPMLTAIQKSLPLYLQGMCIVCCQSQNTNAYLNQLLGNVIEQYIGRFLPASAHVLGLGQHPVLLALKNSASVPPMSLLKKCIVHVIRKSYFEFKGSLLPPRLASILAFILQLVKETNTDVSEIELLLPGVLKCLLLVSEPQVKRLATENLQCMVRACQVGSGGEPAAQLTSVFRQFIEDYGMRYDYQIYSILEAVAALDQQVVIHLVPTLTQSLKNSERKWGLGRNSAQREAYSKLLSQ
type: DOMAIN
name: MMS22L_C
description: MMS22-like, C-terminal
Protein sequence:
MAAGPQAAMEQASSPGLISATEVLVAAATFCLLLLLTQTRRQHAPKGLRSPPGPRGLPMLGNVLELRKDPHLVLTRLSRKYGDVMEVTIGSRPVVVLSGLETIKQALVRQAEDFMGRPDLPSWQYVSNGHSLAFSYECGDAWKARRKLAQNALKTFSIAASPTASSSCLLEEHVSTEASYLVTKFLQLMEEKQSFNPNSYLMVSVANVICAICFGKRYDHDDQELLSVVNMNTEFGDVAAAGNPADFIPLLRYLPNRAMAAFKDVNARFSAFVQKIVQNHYSTFDKEHIRDVTDSLIGHCQEKRTGEDVRVQPSDESIISIVNDLFGAGFDTVTTALSWCMMYAALYPHIQKKIQAELDQTIGRERRPRLSDRGMLPYTEAFILEAFRHSSLLPFTIPHCTTKDTVLNGYYIPKDTCVFINQWQANHDEKIWKDPPSFKPERFLNAAGTELSRTEADKVLIFGLGKRRCIGESIGRWEVFLFLTTILQQLEISLAPGQRVDITPQYGLTMKYKQCECFQMKKRFPSKGSA

Annotated regions:
phrase: FGLGKRRCI
type: CONSERVED_SITE
name: Cyt_P450_CS
description: Cytochrome P450, conserved site