nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MGNYTDGNTRVCGLIGNPVRHTLSPLIHNMLAEITGINMVYVPFEVETVNVGDAIKGALALDIKGMNVTIPHKSEVIPYLEDIDPLAKGIGAVNALVRTPNGGFKGYNTDMTGLYRAMLDEGVEIAGQTVVILGAGGVARPAAFLCGSKGAKRVYILNRTFDRALDVADEVNRALFDMKRDDHITADGINAAGEAMDFPEIVQPMRLEDYKDLYQEKEKFIALQCTSVGLFPDVNSAVIEDIEFYQHVSAALDMVYRPIDTKFMKLARQAGAVAYSGLKMLLYQGIDAYELWFSDELTDENGNPVRITKEQADDIYKSLILEVTGARNIILEGFMGSGKTTVSQILADKLSLEMLDTDAAIVEAEGRSINKIFADDGEEIFRDMETALLATAVSEHFREMVISLGGGLVLREENREMLKELGKVIYLRTSPETVYERVKSDDSRPLLKGEDPLGKIKKLQADRGPVYESCADIIIDTDDLTPEEVASKVCEMVLGDGAIGPF

Annotated regions:
phrase: EIAGQTVVILGAGGVARPAAFLCGSKGAKRVYILNRTFDRALDVADEVNR
type: DOMAIN
name: Shikm_DH/Glu-tRNA_Rdtase
description: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase

phrase: RDMETALLATAVSEHFREMVISLGGGL
type: CONSERVED_SITE
name: Shikimate_kinase_CS
description: Shikimate kinase, conserved site

phrase: LIGNPVRHTLSPLIHNMLAEITGINMVYVPFEVETVNVGDAIKGALALDIKGMNVTIPHKSEVIPYLEDIDPLAKGIGAVN
type: DOMAIN
name: Shikimate_DH-bd_N
description: Shikimate dehydrogenase substrate binding, N-terminal
Protein sequence:
MDSDEIMPDEEHPNVPVGDEESDIDEKYPNRPRNHSPTLPFHELFQTLFNPLGEIKKKPAGAVAARRKVGPHGQSAANLNPLERRRDVIERFISRWRKEVGDDIYPAFRLILPDKDRDRAMYGIKEKAIGKMLVKIMKIDKNSEDGFNLLNWKLPGQAATSRMTGDFAGRCFDVISKRPMRTDVGDMLIEEVNEKLDKLSAASKEEQQLPILAEFYRRMNPEELMWLIRIILRQMKVGATERTFFDVWHPDAENLYSISSSLRRVCWELHDPNIRLDAEDRGISLMQCFQPQLAQFQMDSLDRMVARMRPTEEDPVFWIEEKLDGERMQLHMASDDSVPGGRRFRFWSRKAKEYTYLYGNGIYDENGSLTRYLKDAFADGVQSLILDGEMITWDPEQDAPAPFGTLKTAALSEQRNPFSTTGARPLLRVFDILYLNGRDLTGYTLRDRRKALQKAVRPVHRRFEIHPYEEATTKDQVEAALRKVVAEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGESLDLIVIGGYYGSGRRGGNLSSFLCGLRVDDGHASQGASASKCYSFCKVGGGFNAADYANIRHHTDGKWMEWNPKKPPTAYIELAGRDAQYERPDMWIKPEDSVVICVKAASVSASDQFRLGLTLRFPRFKRLRMDKDWKSALSVQEFLDLKSNVEQEHREKELNVDNSRRKRVKRTAKKPLTVAGYDMDEDVKYAGPSGHIFDGLNFYILTDSSAPIKKTKPELEQLVKANGGMFFQTNNAAPHTICVADRRTVKAASLQKRGDVDIIRPSWIIDCVKQNEIDAGLPDFLLPFEPRHMFFATPGKHDEVASNVDQFGDSYARDTTSEELSDCPESITKLIERLQESVNSGHEMPCGLLFKSLTILFPHRNDDVSESEAKTSSHPSITHVVIDPESSSKEISSLRGKWSRKPGRKVPHIVTVDWVEESWKSRTLLDEERFQPKRCISGIAKPYWPG

Annotated regions:
phrase: PSGHIFDGLNFYILTDSSAPIKKTKPELEQLVKANGGMFFQTNNAAPHTICVADRRTVKAASLQKRGDVDIIRPSWIIDCVKQNE
type: DOMAIN
name: BRCT_dom
description: BRCT domain

phrase: RGGNLSSFLCGLRVDDGHASQGASASKCYSFCKVGGGFNAADYANIRHHTDGKWMEWNPKKPPTAYIELAGRDAQYERPDMWIKPEDSVVICVKAASVSASDQFRLGLTLRFPRFKRLRMD
type: DOMAIN
name: DNA_ligase_ATP-dep_C
description: DNA ligase, ATP-dependent, C-terminal

phrase: IFDGLNFYILTDSSAPIKKTKPELEQLVKANGGMFFQTNNAAPHTICVADRRTVKAASLQKRGDVDIIRPSWIIDCVKQNEI
type: DOMAIN
name: BRCT_dom
description: BRCT domain

phrase: EEKLDGER
type: CONSERVED_SITE
name: DNA_ligase_ATP-dep_CS
description: DNA ligase, ATP-dependent, conserved site

phrase: PFHELFQTLFNPLGEIKKKPAGAVAARRKVGPHGQSAANLNPLERRRDVIERFISRWRKEVGDDIYPAFRLILPDKDRDRAMYGIKEKAIGKMLVKIMKIDKNSEDGFNLLNWKLPGQAATSRMTGDFAGRCFDVISKRPMRTDVGDMLIEEVNEKLDKLSAASKEEQQLPILAEFYRRMNPEELMWLIRIILRQMKVGATERTFFDVW
type: DOMAIN
name: DNA_ligase_ATP-dep_N
description: DNA ligase, ATP-dependent, N-terminal

phrase: GHIFDGLNFYILTDSSAPIKKTKPELEQLVKANGGMFFQTNNAAPHTICVADRRTVKAASLQKRGDVDIIRPSWIIDCVKQ
type: DOMAIN
name: BRCT_dom
description: BRCT domain

phrase: DRGISLMQCFQPQLAQFQMDSLDRMVARMRPTEEDPVFWIEEKLDGERMQLHMASDDSVPGGRRFRFWSRKAKEYTYLYGNGIYDENGSLTRYLKDAFADGVQSLILDGEMITWDPEQDAPAPFGTLKTAALSEQRNPFSTTGARPLLRVFDILYLNGRDLTGYTLRDRRKALQKAVRPVHRRFEIHPYEEATTKDQVEAALRKVVAEASEGLVLKNPRSPYRLNERHDDWMKVKPEY
type: DOMAIN
name: Adenylation_DNA_ligase_IV
description: DNA Ligase 4, adenylation domain

phrase: PQLAQFQMDSLDRMVARMRPTEEDPVFWIEEKLDGERMQLHMASDDSVPGGRRFRFWSRKAKEYTYLYGNGIYDENGSLTRYLKDAFADGVQSLILDGEMITWDPEQDAPAPFGTLKTAALSEQRNPFSTTGARPLLRVFDILYLNGRDLTGYTLRDRRKALQKAVRPVHRRFEIHPYEEATTKDQVEAALRKVVAEASEGLVLKNPRSPYRLNERHDDWMKV
type: DOMAIN
name: DNA_ligase_ATP-dep_cent
description: DNA ligase, ATP-dependent, central

phrase: FSTTGARPLLRVFDILYLNGRDLTGYTLRDRRKALQKAVRPVHRRFEIHPYEEATTKDQVEAALRKVVAEASEGLVLKNPRSPYRLNERHDDWMKVKPEYMTEFGESLDLIVIGGYYGSGRRGGNLSSFLCGLR
type: DOMAIN
name: DNA_ligase_ATP-dep_cent
description: DNA ligase, ATP-dependent, central
Protein sequence:
MALLPDKEKLLRNFLRCANWEEKYLYIIELGQRLPELRDEDKSPQNSIQGCQSQVWIVMRQNAQGIIELHGDSDAAIVKGLIAVVFILYDQMTPQDIVNFDVRPWFEKMALTQHLTPSRSQGLEAMIRAIRAKAAALS

Annotated regions:
phrase: RNFLRCANWEEKYLYIIELGQRLPELRDEDKSPQNSIQGCQSQVWIVMRQNAQGIIELHGDSDAAIVKGLIAVVFILYDQMTPQDIVNFDVRPWFEKMALTQHLTPSRSQGLEAMIRAIR
type: DOMAIN
name: Fe-S_metab-assoc_dom
description: Fe-S metabolism associated domain, SufE-like

phrase: PDKEKLLRNFLRCANWEEKYLYIIELGQRLPELRDEDKSPQNSIQGCQSQVWIVMRQNAQGIIELHGDSDAAIVKGLIAVVFILYDQMTPQDIVNFDVRPWFEKMALTQHLTPSRSQGLEAMIRAIRAKAAA
type: DOMAIN
name: Fe-S_metab-assoc_dom
description: Fe-S metabolism associated domain, SufE-like
Protein sequence:
MKAYFIAILTLFTCIATVVRAQQMSELENRIDSLLNGKKATVGIAVWTDKGDMLRYNDHVHFPLLSVFKFHVALAVLDKMDKQSISLDSIVSIKASQMPPNTYSPLRKKFPDQDFTITLRELMQYSISQSDNNACDILIEYAGGIKHINDYIHRLSIDSFNLSETEDGMHSSFEAVYRNWSTPSAMVRLLRTADEKELFSNKELKDFLWQTMIDTETGANKLKGMLPAKTVVGHKTGSSDRNADGMKTADNDAGLVILPDGRKYYIAAFVMDSYETDEDNANIIARISRMVYDAMR

Annotated regions:
phrase: FPLLSVFKFHVALAV
type: ACTIVE_SITE
name: Beta-lactam_class-A_AS
description: Beta-lactamase, class-A active site

phrase: DKGDMLRYNDHVHFPLLSVFKFHVALAVLDKMDKQSISLDSIVSIKASQMPPNTYSPLRKKFPDQDFTITLRELMQYSISQSDNNACDILIEYAGGIKHINDYIHRLSIDSFNLSETEDGMHSSFEAVYRNWSTPSAMVRLLRTADEKELFSNKELKDFLWQTMIDTETGANKLKGMLPAKTVVGHKTGSSDRNADGMKTADNDAGLVILPDGRKYYIAAF
type: DOMAIN
name: Beta-lactam_cat
description: Beta-lactamase class A, catalytic domain
Protein sequence:
MTVDVKKVINHKIKPIEYNLTRKDVALYAISLGCGKKHLKFVYEGSDNFSALPTLGVIFPGQMIVDVISEGIDGIEFDPMMLLHGEQELEILNEIPVEGVFVTESKITNLYDKGKGALLILQCITSEKSSGKPIFKNIFSFFIRGIGGFGGDRGPNEKPIQIPKDRAPDAISKQATSEDQAVIYRLAGGDLNPLHIDPEMSKIGGFEVPILHGLCTYGIASRGVLEHFCDNDPSRLKSIKTRFTKHVYPGETIETEMWKINPTTILFQSKTNRDGSYVLSSGVAIIEPIKKGSL

Annotated regions:
phrase: DRAPDAISKQATSEDQAVIYRLAGGDLNPLHIDPEMSKIGGFEVPILHGLCTYGIASRGVLEHFCDNDPSRLKSIKTRFTKHVYPGETIETEMWKINPTTILFQS
type: DOMAIN
name: MaoC-like_dom
description: MaoC-like dehydratase domain

phrase: YNLTRKDVALYAISLGCGKKHLKFVYEGSDNFSALPTLGVIFPGQMIVDVISEGIDGIEFDPMMLLHGEQELEILNEIPVEGVFVTESKITNLYDKGKGALLILQCITSEKSSGKPIFKNIFSFFIR
type: DOMAIN
name: MFE-2_N
description: Peroxisomal multifunctional enzyme type 2-like, N-terminal domain
Protein sequence:
MLTEQQRRELDWEKTDGLMPVIVQHAVSGEVLMLGYMNPEALDRTIESGKVTFFSRTKQRLWTKGETSGNFLNVVSIAPDCDNDTLLVLANPIGPTCHKGTSSCFGDTAHQWLFLYQLEQLLAERKSADPETSYTAKLYASGSKRIAQKVGEEGVETALAATVHDRFELTNEASDLMYHLLVLLQDQDLDLTTVIENLRKRHQ

Annotated regions:
phrase: MLGYMNPEALDRTIESGKVTFFSRTKQRLWTKGETSGNFLNVVSIAPDCDNDTLLVLANPIGPTCHKGTSSC
type: DOMAIN
name: PRib_AMP_CycHydrolase_dom
description: Phosphoribosyl-AMP cyclohydrolase domain
Protein sequence:
MRLSIVTTMYMSEPYVLEFYRRARAAADKITPDVEIIFVDDGSPDAALQQAVSLLDSDPCVRVIQLSRNFGHHKAMMTGLAHATGDLVFLIDSDLEEDPALLEPFYEKLISTGADVVFGCHARRPGGWLRNFGPKIHYRASALLCDPPLHENTLTVRLMTADYVRSLVQHQERELSIAGLWQITGFYQVPMSVNKAWKGTTTYTFRRKVATLVDNVTSFSNKPLVFIFYLGAAIFIISSSAAGYLIIDRIFFRALQAGWASVIVSIWMLGGVTIFCIGLVGIYVSKVFIETKQRPYTIIRRIYGSDLTTREPSSLKTAFPAAHLSNGKRVTSEPEGLATGNR

Annotated regions:
phrase: SIVTTMYMSEPYVLEFYRRARAAADKITPDVEIIFVDDGSPDAALQQAVSLLDSDPCVRVIQLSRNFGHHKAMMTGLAHATGDLVFLIDSDLEEDPALLEPFYEKLISTGADVVFGCHARRPGGWLRNFGP
type: DOMAIN
name: Glyco_trans_2-like
description: Glycosyltransferase 2-like
Protein sequence:
MKALRRFTVRAHLPERLAALDQLSTNLRWSWDKPTQDLFAAIDPALWEQCGHDPVALLGAVNPARLDELALDAEFLGALDELAADLNDYLSRPLWYQEQQDAGVAAQALPTGIAYFSLEFGVAEVLPNYSGGLGILAGDHLKSASDLGVPLIAVGLYYRSGYFRQSLTADGWQHETYPSLDPQGLPLRLLTDANGDPVLVEVALGDNAVLRARIWVAQVGRVPLLLLDSDIPENEHDLRNVTDRLYGGDQEHRIKQEILAGIGGVRAIRAYTAVEKLTPPEVFHMNEGHAGFLGIERIRELVTDAGLDFDTALTVVRSSTVFTTHTPVPAGIDRFPLEMVQRYVNDQRGDGRSRLLPGLPADRIVALGAEDDPAKFNMAHMGLRLAQRANGVSLLHGRVSRAMFNELWAGFDPDEVPIGSVTNGVHAPTWAAPQWLQLGRELAGSDSLREPVVWQRLHQVDPAHLWWIRSQLRSMLVEDVRARLRQSWLERGATDAELGWIATAFDPNVLTVGFARRVPTYKRLTLMLRDPDRLEQLLLDEQRPIQLIVAGKSHPADDGGKALIQQVVRFADRPQVRHRIAFLPNYDMSMARLLYWGCDVWLNNPLRPLEACGTSGMKSALNGGLNLSIRDGWWDEWYDGENGWEIPSADGVADENRRDDLEAGALYDLLAQAVAPKFYERDERGVPQRWVEMVRHTLQTLGPKVLASRMVRDYVEHYYAPAAQSFRRTAGAQFDAARELADYRRRAEEAWPKIEIADVDSTGLPDTPLLGSQLTLTATVRLAGLRPNDVTVQGVLGRVDAGDVLMDPVTVEMAHTGTGDGGYEIFSTTTPLPLAGPVGYTVRVLPRHPMLAASNELGLVTLA

Annotated regions:
phrase: EACGTSGMKSAL
type: CONSERVED_SITE
name: Pyridoxal_P_attach_site
description: Phosphorylase pyridoxal-phosphate attachment site

phrase: LPERLAALDQLSTNLRWSWDKPTQDLFAAIDPALWEQCGHDPVALLGAVNPARLDELALDAEFLGALDELAADLNDYLSRPLWYQEQQDAGVAAQALPTGIAYFSLEFGVAEV
type: DOMAIN
name: Glycogen_phosphorylase_DUF3417
description: Glycogen phosphorylase, domain of unknown function DUF3417
Protein sequence:
MALEKSLVRLLLLVLILLVLGWVQPSLGKESRAKKFQRQHMDSDSSPSSSSTYCNQMMRRRNMTQGRCKPVNTFVHEPLVDVQNVCFQEKVTCKNGQGNCYKSNSSMHITDCRLTNGSRYPNCAYRTSPKERHIIVACEGSPYVPVHFDASVEDST

Annotated regions:
phrase: RAKKFQRQHMDSDSSPSSSSTYCNQMMRRRNMTQGRCKPVNTFVHEPLVDVQNVCFQEKVTCKNGQGNCYKSNSSMHITDCRLTNGSRYPNCAYRTSPKERHIIVACEGSPYVPVHF
type: DOMAIN
name: RNaseA_domain
description: Ribonuclease A-domain

phrase: CKPVNT
type: ACTIVE_SITE
name: RNaseA_AS
description: Ribonuclease A, active site

phrase: KESRAKKFQRQHMDSDSSPSSSSTYCNQMMRRRNMTQGRCKPVNTFVHEPLVDVQNVCFQEKVTCKNGQGNCYKSNSSMHITDCRLTNGSRYPNCAYRTSPKERHIIVACEGSPYVPVHFDAS
type: DOMAIN
name: RNaseA_domain
description: Ribonuclease A-domain
Protein sequence:
MIQSESRLKVADNSGAKELLCIRVMGGSTRRYANIGDIIVASVKDATPGGVVKKGDVVKAVVVRTVKGARRKDGSYIRFDENAAVIIKDDKNPKGTRIFGPVARELREKQFMKIVSLAPEVL

Annotated regions:
phrase: AVVVRTVKGARRKDGSYIRFDENAAV
type: CONSERVED_SITE
name: Ribosomal_uL14_CS
description: Large ribosomal subunit protein uL14, conserved site
Protein sequence:
MSRLLRLGITGGIACGKSVVAGYLQRQYGVPIVDADVLARQVVAVGTPIYQAIVDRYGDGICRRDGTLDRSRLGEIVFAQPQERQWLEAQIHPAVVAEMEQAMATCDQPLMALVIPLLFEAHLEGLVDHIWVVATPPEQQLARLQQRDRLSAHAAGQRLASQLPLEEKIRRADTVLWNTGSLEELYRQVDQAFSLLGRGGKGG

Annotated regions:
Protein sequence:
MSKVTSSTLLKYKQEGRKFTALTAYDASFASAFDGEGIDVLLVGDSLGMVLQGHDDTLPVTTADIAYHTRCVRRGIERSLLIADMPFMSYATPEQAMENATTLMQAGANMVKLEGGHWLLETVTKLTERGIPVCAHLGLTPQSVNVFGGFKVQGRDAENAQRIIDEAKALEAAGAQLLVVECIPASLATAITQALTIPVIGIGAGATTDGQILVMHDVLGISSGYIPRFSKNYLKQTGEIRSAVRAYIEEVANGSFPSAEHTFN

Annotated regions:
Protein sequence:
MNEQYSAMRGNVSMLGKLLGDTIKDALGEEILDRVETIRRLSKSSRAGNEASRQALLNTLQNLSNDELLPVARAFSQFLNLANVAEQYHRISPHGEAASNPDALYHLFTRLKNKNLDEAQIRQAVDNLSIELVLTAHPTEIARRTLIHKLVEVNTCLSQLDHDDLADYERHQIMRRLRQLVAQSWHTDEIRKNRPTPIDEAKWGYAVVENSLWEGVPAFLREFNEQLEKSLGYQLPVEAVPVRFTAWMGGDRDGNPNVTAEVTRRALLLSRWKAAELFLRDVQVLVSELSMTVCTPELRALAGEHTQEPYREVLKRLRQQLNNTLTYLDARLRGERLPRPADLLVSNDQLWQPLHTCYRSLKACGMGIIANGQLLDTLRRVHCFGVPLVRIDIRQESTRHTEALAELTRYLGLGDYETWSEEDKQTFLLRELNSKRPLVPRHWTPSPETKEVFDTCQVIAEAPAGAIAAYVISMARTPSDVLAVHLLLKEAGCPYNLPVVPLFETLDDLNNAEAVMTQLLSIDWYRGFIQGKQMVMIGYSDSAKDAGVMAASWAQYRAQEALVRVCDNAGIALTLFHGRGGSIGRGGAPAHDALLSQPPGSLKSGLRVTEQGEMIRFKLGLPEIAVSSLTLYTSAILEANLLPPPAPKQEWRDVMDELSQTSCALYRRYIRKNPDFVPYFRSATPELELGKLPLGSRPAKRRPSGGVESLRAIPWIFAWTQNRLMLPAWLGAGTALEEAMTEGHRGTLENMYRSWPFFTTRIDMLEMVFAKSDLWLAEYYDQRLVDPALWPLGTELRQQVQRDIQAVLTIADTDHLMADLPWAAESIALRNVYTDPLNVLQAELLYRSRHQEQPDANVEQALMVTIAGVAAGMRNTG

Annotated regions:
phrase: VMIGYSDSAKDA
type: ACTIVE_SITE
name: PEPCASE_His_AS
description: Phosphoenolpyruvate carboxylase, His active site

phrase: VLTAHPTEIAR
type: ACTIVE_SITE
name: PEP_COase_Lys_AS
description: Phosphoenolpyruvate carboxylase, Lys active site
Protein sequence:
MTTDTIVAQATAPGRGGVGIIRVSGPLAAHVAQTVTGRTLRPRYAEYLPFTDEDGQQLDQGIALFFPNPHSFTGEDVLELQGHGGPVVMDMLIRRILQIKGVRPARPGEFSERAFLNDKMDLTQAEAIADLIDASSEQAAKSALQSLQGEFSKRIHTLVESLIHLRIYVEAAIDFPEEEIDFLADGKVSADLQTIIDNLAAVRREANQGAIMREGMKVVIAGRPNAGKSSLLNALSGKESAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDASDAVEKIGIERAWEEIRQADRVLFMVDGTTTEATDPQDIWPDFVDKLPENIGITVIRNKADQTGEPLGICHVNQPTLIRLSAKTGQGVDALRQHLKECMGFSGNQEGGFMARRRHLDALERAAEHLAIGQQQLEGYMAGEILAEELRIAQQHLNEITGEFSSDDLLGRIFSSFCIGK

Annotated regions:
phrase: KVVIAGRPNAGKSSLLNALSGKESAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDASDAVEKIGIERAWEEIRQADRVLFMVDGTTTEATDP
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: GMKVVIAGRPNAGKSSLLNALSGKESAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDASDAVEKIGIERAWEEIRQADRVLFMVDGTTTEATDPQDIWPDFVDKLPENIGITVIRNKADQTGEPLGICHVNQPTLIRLSAKTGQGVDALRQHLKECM
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain

phrase: LTQAEAIADLIDASSEQAAKSALQSLQGEFSKRIHTLVESLIHLRIYVEAAIDFPEEEIDFLADGKVSADLQTIIDNLAAVRREANQGAIMREGMKVVIAGRPNAGKSSLLNALSGKESAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDASDAVEKIGIERAWEEIRQADRVLFMVDGTTTEATDPQDIWPDFVDKLPENIGITVIRNKADQTGEPLGICHVNQPTLIRLSAKTGQGVDALRQHLKECMGFSGNQEGGFMARRRHLDALERAAEHLAIGQQQLEGYMAGEILAEELRIAQQHLNEITGEFSSDDLLGRIFSSF
type: DOMAIN
name: MnmE_helical
description: MnmE, helical domain

phrase: TIVAQATAPGRGGVGIIRVSGPLAAHVAQTVTGRTLRPRYAEYLPFTDEDGQQLDQGIALFFPNPHSFTGEDVLELQGHGGPVVMDMLIRRILQIKGVRPARPGEFSERAFLND
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal

phrase: GMKVVIAGRPNAGKSSLLNALSGKESAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDASDAVEKIGIERAWEEIRQADRVLFMVDGTTTEATDPQDIWPDFVDKLPENIGITVIRNKADQTGEPLGICHVNQPTLIRLSAKTGQGVDALRQ
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: REGMKVVIAGRPNAGKSSLLNALSGKESAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRDASDAVEKIGIERAWEEIRQADRVLFMVDGTTTEATDPQDIWPDFVDKLPENIGITVIRNKADQTGEPLGICHVNQPTLIRLSAKTGQGVDALRQHLKECM
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain

phrase: DTIVAQATAPGRGGVGIIRVSGPLAAHVAQTVTGRTLRPRYAEYLPFTDEDGQQLDQGIALFFPNPHSFTGEDVLELQGHGGPVVMDMLIRRILQIKGVRPARPGEFSERAFL
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal
Protein sequence:
MSHADMSDSSGFNEAAAAFSWNGPKKAINPYLDPAEVAPFSALSNLITLYAADNEQEQLRREELSEQVWERYFFNESRDPVQREMEQDKLISRAKLAHEQQRFNPDMVILADVSAQPTHISKPLMQRIEYFSSLGRPKAYSRYLRETIKPCLERLDCVRDSQLSASFRFMASHQGLEGLLILPEMSQDQVKRLSTLVAAHMSMCLEAACGDLYATDDVKPEEIRKTWEKVAAETLRLDVIPPAFEKLRRKRNRRKPVPYELIPGSLARMLCADWWYRKLWKMRCEWREEQLRAVCLVSKKASPYVSYEAVTHKREQRRKSLEFFRSHELVNEDGDTLDMEDVVNASSSNPAHRRNEMMACVKGLELIAEMRGDCAVFYTITCPSRFHSTLNNGRPNPTWTNATVRQSSDYLVGMFAAFRKAMQPKPGCAGMACGWLSRTMTVLCTGISCVSCAKKTAAPLLHCCVSLPSVKTVRNWAITRGHALSLSGLRWYGVRVAEPHHDGTVHWHLMCFMRKKDRRAITALLRKFAIREDREELGNNTGPRFKSELINPRKGTPTSYIAKYISKNIDGRGLAGEISKETGKSLRDNAEYVNAWASLHRVQQFRFFGIPGRQAYRELRLLAGQAARQQGDKKASTPILDDPRLDAILAAADAGCFATYIMKQGVLVPRKYHLIRTAYEINEEPTAYGDHGIRIYGIWSPIVQGKICTHAMKWKMVRKAVDVQEAAADQGACAPWTRGNNCPLAENLNQQEKDKSADGDTRTDITRMDDKELHDHLHSMSKKERRELAARLRLVKPIRRKDYKQRITDHQRQQLVYELKSRGFDGSEKEVDLLLRGGSIPSGAGLRIFYRNQRLQEDDKWRNLY

Annotated regions:
phrase: HALSLSGLRWYGVRVAEPHHDGTVHWHLMCFMRKKDRRAITALLRKFAIREDREELGNNTGPRFKSELINPRKGTPTSYIAKYISKNIDG
type: DOMAIN
name: Replication_gene_A-like
description: Replication gene A protein-like

phrase: DQVKRLSTLVAAHMSMCLEAACGDLYATDDVKPEEIRKTWEKVAAETLRLDVIPPAFEKLRRKRNRRKPVPYELIPGSLARMLCADWWYRKLWKMRCEWREEQLRAVCLVSKKASPYVSYEAVTHKREQRRKSLEFFRSHELVNEDGDTLDMEDVVNASSSNPAHRRNEMMACVKGLELIAEMRGDCAVFYTITCPSRFHSTLNNGRPNPTWTNATVRQSSDYLVGMFAAFRKAM
type: DOMAIN
name: Replication_gene_A-like
description: Replication gene A protein-like
Protein sequence:
MSEKEGKVIPETNGMKRPRFDPVKLGLPEEFTLTDYTRLKGCSCKVPQPELLALLQSVSTTPGRRDVGMDCSIVKLQHKDETGKPLYMVSTTDFFFPSVEDPYLQGQIGAANVLSDLYSTGIDRCDTVLMLLAASTDMDKTEREVCTQEMMKGFVDHVRLAGSDVTGGQTVMNPWPLIGGIATSVVAESQMIRPTGLQPGDILVLTKPLGCQIAVNLKQWLRRPSPIFEEQIQGKMDSEEIEELYNAAADGMKRLNRMAAALMHSHGAHGATDVTGFGILGHAKNLGSAQKADVCLVLDSLPMYRGAVKASKLMGDKYRLFEGYAAETSGGLLVAFGTREEAEGYIRELYETDGEPAWVVGRVVRREGSAPYALLQKDYKIIEVGAKVNDKII

Annotated regions:
phrase: QPGDILVLTKPLGCQIAVNLKQWLRRPSPIFEEQIQGKMDSEEIEELYNAAADGMKRLNRMAAALMHSHGAHGATDVTGFGILGHAKNLGSAQKADVCLVLDSLPMYRGAVKASKLMGDKYRLFEGYAAETSGGLLVAFGTREEAEGYIRELYETDGEPAWVVGRVVRREG
type: DOMAIN
name: PurM-like_C_dom
description: PurM-like, C-terminal domain

phrase: DCSIVKLQHKDETGKPLYMVSTTDFFFPSVEDPYLQGQIGAANVLSDLYSTGIDRCDTVLMLLAASTDMDKTEREVCTQEMMKGFVDHVRLAGSDVTGGQTVMNPWPLIGGIATS
type: DOMAIN
name: PurM-like_N
description: PurM-like, N-terminal domain
Protein sequence:
MVEMNFKVEAFEGPLDLLLHLIGQLEVDIYDIPMAEITDQYMEFVHTMQEMELDVASEYLVMAATLLAIKSKMLLPKQELEIDYDTLEEEEDPRDALVEKLMEYKRFKEAAKELKEKEAERSFYFSKPPMDLAEYDEGTKVAELDVSLNDMLSAFNKMLRRKKLNKPLHTRITTQEISIDDRMNSVLGKLHQQTNHRLRFDELFEEQTKEQLVVTFLALLELMKRKLVEVEQSASFADLYVQGKGEELS

Annotated regions:
Protein sequence:
MKVMGTRKNCPPWWWIWGTMLLGMLMICSSVADNLWVTVYYGVPVWKEANTTLFCASDAKAYDTEAHNVWATHACVPTDPNPQEVPLENVTEEFNMWKNDMVNQMQEDIINLWDQSLKPCVKLTPLCVTLNCTDVGNTTNGNTTNVNSTTQGTMEKGEIKNCSFNITTRVRSKVQKEYALFYKLDVVPIDNSTGKYRLIHCNTSIITQACPKVTFEPIPIHYCAPAGFAILKCRDKKFNGTGACKNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVVRSANFTDNAKTIIVQLNESVVINCTRPNNXTRRSLSVGPGRAIYATGDIIGDIRQAYCNVSRTAWNKTLNQIAIKLREQFKNKTIVFNHSSGGDPEIVMHTFNCRGEFFYCNTTKLFNSTWEVNNTWHVNDSIGGDENIILPCRIKQIVNMWQEVGKAMYAPPIAGQIRCDSNITGLLLTRDGGNTNNDNTETFRPGGGNMKDNWRSELYKYKVVQIEPLGVAPTKARRRVVQREKRAVTLGAMFLGFLGAAGSTMGAASMTLTVQARLLLSGIVQQQNNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNSSWSNKTLDDIWNNMTWMEWEREISNYTSEIYNLIEIAQNQQEKNEQDLLALDKWASLWNWFDISKWLWYIKIFIXIIGGLVGLRIVFAVLSIVNKVRQGYSPLSLQTLLPTQRGPDRPGGIEEEGGERDRDTSNXSANGFLTLFWDDLRSLFL

Annotated regions:
phrase: MGAASMTLTVQARLLLSGIVQQQNNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNSSWSNKTLDDIWNNMTWMEWEREISNYTSEIYNLIEIAQNQQEKNEQDLLALDKWASLWNWFDISKWLWYIKIFIXIIGGLVGLRIVFAVLSIVNKVRQGYSPLSLQ
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: VQARLLLSGIVQQQNNLLRAIEAQQHMLQLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTAVPWNSSWSNKTLDDIWNNMTWMEWEREISNYTSEIYNLIEIAQNQQEKNEQDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKEANTTLFCASDAKAYDTEAHNVWATHACVPTDPNPQEVPLENVTEEFNMWKNDMVNQMQEDIINLWDQSLKPCVKLTPLCVTLNCTDVGNTTNGNTTNVNSTTQGTMEKGEIKNCSFNITTRVRSKVQKEYALFYKLDVVPIDNSTGKYRLIHCNTSIITQACPKVTFEPIPIHYCAPAGFAILKCRDKKFNGTGACKNVSTVQCTHGIRPVVSTQLLLNGSLAEEEVVVRSANFTDNAKTIIVQLNESVVINCTRPNNXTRRSLSVGPGRAIYATGDIIGDIRQAYCNVSRTAWNKTLNQIAIKLREQFKNKTIVFNHSSGGDPEIVMHTFNCRGEFFYCNTTKLFNSTWEVNNTWHVNDSIGGDENIILPCRIKQIVNMWQEVGKAMYAPPIAGQIRCDSNITGLLLTRDGGNTNNDNTETFRPGGGNMKDNWRSELYKYKVVQIEPLGVAPTKARRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MRIALCIEYDGASYHGWQSQKDVTSVQEELEKALMVVANEPIEVMCAGRTDAGVHGTGQVVHFDTNSVRKLPVWMVGVNANLPKNIAVRWVKEVNEDFHARFTATARRYRYIIFNNRQRPAIFSHGVSHYHETLDADLMHEAGQYLLGENDFTSFRAVRCQSRTPWRNLIHLKVTRHGDFIVIDIKANAFVHHMVRNITGSLIEVGRGKQKPEWVQWLLEAKDRKLAGATAKAEGLYLIDVDYPKEWDLPRVPLGPLFLPDN

Annotated regions:
phrase: QYLLGENDFTSFRAVRCQSRTPWRNLIHLKVTRHGDFIVIDIKANAFVHHMVRNITGSLIEVGRGKQKPEWVQWLLEAKDRKLAGATAKAEGLYLIDVDY
type: DOMAIN
name: PsdUridine_synth_TruA_a/b_dom
description: Pseudouridine synthase I, TruA, alpha/beta domain

phrase: CIEYDGASYHGWQSQKDVTSVQEELEKALMVVANEPIEVMCAGRTDAGVHGTGQVVHFDTNSVRKLPVWMVGVNANLPKNIAVRWVKEVNEDFHAR
type: DOMAIN
name: PsdUridine_synth_TruA_a/b_dom
description: Pseudouridine synthase I, TruA, alpha/beta domain
Protein sequence:
MSKTHLTEQKFSDFALHPVVVQALEKKGFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAAENRQVNQPRALIMAPTRELAVQIHSDAEPLAEATGIKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYTKQNHVNLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPAATERLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIETYIGHSIPVSKYNPDALLSELPPPKRLSRPRTGNGPRRSGAPRNRRRTG

Annotated regions:
phrase: VLDEADRM
type: CONSERVED_SITE
name: RNA-helicase_DEAD-box_CS
description: ATP-dependent RNA helicase DEAD-box, conserved site

phrase: LPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAAENRQVNQPRALIMAPTRELAVQIHSDAEPLAEATGIKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYTKQNHVNLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPAATERLNMLFSATLSYRVRELAFEQMNNAEY
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: EDIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRA
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: QKFSDFALHPVVVQALEKKGFYNCTPIQ
type: DOMAIN
name: RNA_helicase_DEAD_Q_motif
description: RNA helicase, DEAD-box type, Q motif

phrase: EKMRLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRA
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: TPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAAENRQVNQPRALIMAPTRELAVQIHSDAEPLAEATGIKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYTKQNHVNLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPAATERLNMLFSATLSYRV
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: GFYNCTPIQALALPLTLAGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAAENRQVNQPRALIMAPTRELAVQIHSDAEPLAEATGIKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYTKQNHVNLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPAATERLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKE
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: RLLQTLIEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIETYIGHSIPVSKYNPDAL
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like
Protein sequence:
MKNVTDSFLSLGHWSSAGSFGLNTDILATNPINLSVVLGVLIFFGKGVLSDLLDNRKQRILKTIQNSEELGVGAVEKLEKARSRLRKVKTEAEQFLVNGYSDIEREKFNLIKSTSNTLEQLENDKNETLRFEQQRLIYQVRQRFFQQALQRAIGTLNSCLNNELHLRTISANIGMLGTIKEITD

Annotated regions:
Protein sequence:
MLCRLPGPSTSRGEKEMGNSMKSTPAPLERPLSNTEGLESDFLAVLNDYPSPDISPPIFRRGEKLRVISDEGGWWKAISLSTGRESYIPGICVARVYHGWLFEGLGRDKAEELLQLPDTKIGSFMIRESETKKGFYSLSVRHRQVKHYRIFRLPNNWYYISPRLTFQCLEDLVTHYSEVADGLCCVLTTPCLAQNTPAPTAQPSPCTSPGSPVTLRQKTFDWKRVSSLQEGPEGAENPLRVDESLFSYGLRESIASYLSLTGDDSSNFDRKKKSLSLIYSGSKRKSSFFSAPNTLKINALAGTQKTKALTAT

Annotated regions:
phrase: FRRGEKLRVISDEGGWWKAISLSTGRESYI
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: HGWLFEGLGRDKAEELLQLPDTKIGSFMIRESETKKGFYSLSVRHRQVKHYRIFRLPNNWYYISPRLTFQCLEDLVTHYSEVAD
type: DOMAIN
name: SH2
description: SH2 domain

phrase: PGICVARVYHGWLFEGLGRDKAEELLQLPDTKIGSFMIRESETKKGFYSLSVRHRQVKHYRIFRLPNNWYYISPRLTFQCLEDLVTHYSEVADGLCC
type: DOMAIN
name: SLAP_SH2
description: SLAP, SH2 domain

phrase: LESDFLAVLNDYPSPDISPPIFRRGEKLRVISDEGGWWKAISLSTGRESYIPGICVARVY
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: WLFEGLGRDKAEELLQLPDTKIGSFMIRESETKKGFYSLSVRHRQVKHYRIFRLPNNWYYISPRLTFQCLEDLVTHYSEVADGLCCVLTTP
type: DOMAIN
name: SH2
description: SH2 domain

phrase: DFLAVLNDYPSPDISPPIFRRGEKLRVISDEGGWWKAISLSTGRESYIPGICVARV
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: FLAVLNDYPSPDISPPIFRRGEKLRVISDEGGWWKAISLSTGRESYIPGICVAR
type: DOMAIN
name: SLAP_SH3
description: Src-like-adapter, SH3 domain

phrase: WLFEGLGRDKAEELLQLPDTKIGSFMIRESETKKGFYSLSVRHRQVKHYRIFRLPNNWYYISPRLTFQCLEDLVTH
type: DOMAIN
name: SH2
description: SH2 domain
Protein sequence:
MSKGFLVSLEGPEGAGKTSVLEALLPILEVKGVKVLTTREPGGVLIGEKIREVILDPSHTQMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWLNQFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLEKEGNRIVKIDASLPLEQVVETTKAVLFDGMGLAK

Annotated regions:
phrase: LEGPEGAGKTSVLEALLPILEVKGVKVLTTREPGGVLIGEKIREVILDPSHTQMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWLNQFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLEKEGNRIVKIDASLPLEQVV
type: DOMAIN
name: Thymidylate_kin-like_dom
description: Thymidylate kinase-like domain

phrase: IMDRFIDSSVAY
type: CONSERVED_SITE
name: Thymidylate_kin_CS
description: Thymidylate kinase, conserved site