nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MEFSPPLQLATLIQRYKRFLADVITPDGRELTLHCPNTGAMTGCATPGDTVWYSTSDNTKRKYPHTWELTQSQSGAFICVNTLWANRLTKEAILNESISELSGYSSLKSEVKYGAERSRIDFMLQADSRPDCYIEVKSVTLAENEQGYFPDAVTERGQKHLRELMSVAAEGQRAVIFFAVLHSAITRFSPARHIDEKYAQLLSEAQQRGVEILAYKAEISAEGMALKKSLPVTL

Annotated regions:
phrase: ANRLTKEAILNESISELSGYSSLKSEVKYGAERSRIDFMLQADSRPDCYIEVKSVTLAENEQGYFPDAVTERGQKHLRELMSVAAEGQRAVIFFAVLHSAITRFSPARHIDEKYAQLLSEAQQRGVEILAYKAEISA
type: DOMAIN
name: SfsA_C
description: Sugar fermentation stimulation protein, C-terminal

phrase: IQRYKRFLADVITPDGRELTLHCPNTGAMTGCATPGDTVWYSTSDNTKRKYPHTWELTQSQSGAFIC
type: DOMAIN
name: SfsA_N
description: SfsA, N-terminal OB domain
Protein sequence:
MPQRTPLYDQHVGAGARVVDFAGWEMPLHYGSQLAEHQAVRSDVGLFDVSHMAVTDLSGPGARALLREQLANDVAKLDGRPGQALYSCLLNGRGGVVDDLIVYLREDASYRVVSNAATREKVRPRLLEQAHAAGVTAEARDDLAMIAVQGPRAASVLEQLFGDQAAAALACKPFQAAAIGEIFAGRTGYTGEDGFELILPADQAPALWDRLTEAGAQPCGLGARDSLRLEAGLNLNGHEMDEETTPLEAALGWTVAWDPEDRDFIGRAALEEQRRHGAAWRLIGLLVEGRAPAREGYVVRTDAGDGVITSGAHSPTLGGPIALARVPAGAEGDWRVVIRKREAAARRVKPPFVRHGKVCV

Annotated regions:
phrase: RLIGLLVEGRAPAREGYVVRTDAGDGVITSGAHSPTLGGPIALARVPAGAEGDWRVVIRKREAAARRVKPPF
type: DOMAIN
name: GCST_C
description: Aminomethyltransferase, C-terminal domain

phrase: LYDQHVGAGARVVDFAGWEMPLHYGSQLAEHQAVRSDVGLFDVSHMAVTDLSGPGARALLREQLANDVAKLDGRPGQALYSCLLNGRGGVVDDLIVYLREDASYRVVSNAATREKVRPRLLEQAHAAGVTAEARDDLAMIAVQGPRAASVLEQLFGDQAAAALACKPFQAAAIGEIFAGRTGYTGEDGFELILPADQAPALWDRLTEAGAQPCGLGARDSLRLEAGLNLNGHEMDEETTPLEAALGW
type: DOMAIN
name: GCV_T_N
description: Aminomethyltransferase, folate-binding domain
Protein sequence:
MSTLGHQYDNSLVSNAFGFLRLPMNFQPYDSDADWVITGVPFDMATSGRAGGRHGPAAIRQVSTNLAWEHNRFPWNFDMRERLNVVDCGDLVYAFGDAREMSEKLQAHAEKLLAAGKRMLSFGGDHFVTLPLLRAHAKHFGKMALVHFDAHTDTYANGCEFDHGTMFYTAPKEGLIDPNHSVQIGIRTEFDKDNGFTVLDACQVNDRSVDDVIAQVKQIVGDMPVYLTFDIDCLDPAFAPGTGTPVIGGLTSDRAIKLVRGLKDLNIVGMDVVEVAPAYDQSEITALAAATLALEMLYIQAAKKSE

Annotated regions:
phrase: TFDIDCLDPAFAPGTGTPVIG
type: BINDING_SITE
name: Ureohydrolase_Mn_BS
description: Ureohydrolase, manganese-binding site
Protein sequence:
MSFSLFRKAPKFWERRGPTSLLLWPLSWLYGLILRARKLIHDLGIVRTKPTPVPIIIVGNIRVGGTGKTPIVIALAKRLSQLGWKPGIISRGYGSSSQTAPLLVRSDSSPSLVGDEPVLIAKRTDNQFPIWVYPKRQQSIQALLKHSPEVDVIISDDGLQHRGLTRWPAREGGRDIEFVVRDSRGEGNRFLLPAGPLREPATRDRDATLFTGNPSFNEKKTGILDEYFLGRRAFSLGTYLGRPYQLIDHANTQSLEQIAEQFLPKSMTAIAGLGNPQRFFDDLAKQGVTCKQIPLPDHAQYTPEFFAKVKAQCLLITEKDAVKCAEISDERIWVVPMSLHLPENFVEWLQSILQRPDPHRYTL

Annotated regions:
Protein sequence:
MRGEKQYQELFLGIPFLSAAGEAPEFVSGVAFDSRDCEAGVVFVAIRGASQDGHKYVKDAVANGAAVVVTEQPVGDDVAVRVVVVRDTSEILGELSSRYYDRPSEKLKLIGVTGTNGKTTVATELYRALRALGKKAGLISTIENRVEERVVPAQRTTPDPVTLNRLLAEMVEEGCEYACMEVSSHAVVQKRIFGLQFAGGIFTNLTQDHLDYHKTMQAYGEAKQQFFSGLPAEAFALSNLDDSRGGFMLEKASCHKYFYSCLGMADFRAKVKEESIEGMEVEIDGVDVVLRLLGGYNSYNMLAVYGALRLLGFEKEEVLRVLSGLGPVEGRFDYQVGPRGEVVVVDYAHTPDALSNVIATICEIKKNSTTRLIVVFGCGGDRDRGKRPEMGRIAAKESEWVVLTSDNPRSEDPRSIISDIVAGIPQQDRWKVLEEPDRRKAITVAMMLARGGDWVLVAGKGHETYQEALGQRCHFDDREEVCAVLKRLRGEGK

Annotated regions:
phrase: VTGTNGKTTVATELYRALRALGKKAGLISTIENRVEERVVPAQRTTPDPVTLNRLLAEMVEEGCEYACMEVSSHAVVQKRIFGLQFAGGIFTNLTQDHLDYHKTMQAYGEAKQQFFSGLPAEAFALSNLDDSRGGFMLEKASCHKYFYSCLGMADFRAKVKEESIEGMEVEIDGVDVVLRLLGGYNSYNMLAVYG
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRFDYQVGPRGEVVVVDYAHTPDALSNVIATICEIKKNSTTRLIVVFGCGGDRDRGKRPEMGRIAAKESEWVVLTSDNPRSEDPRSIISDIVAGIPQQDRWKVLEEPDRRKAITVAMMLARGGDWVLVAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: VSGVAFDSRDCEAGVVFVAIRGASQDGHKYVKDAVANGAAVVVTEQPVGDDVAVRVVVVRDTSEILGELSSRY
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain
Protein sequence:
MLIIPAVDIKDGKCVQLVQGKPGTEQVVLDDPAGVAGRWESLGAETIHVVDLDGALGLEKNTGILKEITERVSVPLQIGGGIRSREYAGKLLDMGFERVILGTMAIENPAIVEELAGEYGSERIMVSLDSRDSRVVIRGWTEKVPFTAEEMARKFQERGAGSILFTNVDFEGLLSGFDLKPVSELVEAVEIPVIYSGGVSSLNDLRMLQGTGVMGVVIGSAIYRGLIDLTEALKYQDLK

Annotated regions:
Protein sequence:
MNQQTTNRDTGEAAATNAPANSATSTSTPDNQPTPLDAFEVLLITGMSGAGRSHAADCVEDMGWYVVDNLPPKLLIPLVDMMTTSGSGSESGVHKLAAVIDVRSSYFDELAAVLGHLDDLGVKTRILFLDASNEVLIKRYESVRRPHPLQHGNRLIDGILEERHLLEDLKERADWVIDTSSLSIHQLSTKLYEAMLGSGPTTVAVHIFSFGFKYGMPIDADFVADVRFLPNPFWVPNLRELTGHDKPVADYVLSSKGAKEFLDAYEKAIEIALEGYAQEDKHYVTIAVGCTGGQHRSVAMSEELARRLRAHGLNVTVSAREQHKRHSS

Annotated regions:
phrase: EVLLITGMSGAGRSHAADCVEDMGWYVVDNLPPKLLIPLVDMMTTSGSGSESGVHKLAAVIDVRSSYFDELAAVLGHLDDLGVKTRILFLDASNEVLIKRYESVRRPHPLQHGNRLIDGILEERHLLEDLKERADWVIDTSSLSIHQLSTKLYEAML
type: DOMAIN
name: RapZ-like_N
description: RapZ-like, N-terminal domain

phrase: AVHIFSFGFKYGMPIDADFVADVRFLPNPFWVPNLRELTGHDKPVADYVLSSKGAKEFLDAYEKAIEIALEGYAQEDKHYVTIAVGCTGGQHRSVAMSEELARRLRAHGLNVTVSARE
type: DOMAIN
name: RapZ_C
description: RapZ, C-terminal domain
Protein sequence:
MSTLYIAGAWQAGQGELFHSLNPVTLHVLWSGQGATAEQVDHAVQAARQAFPAWALLSLDQRIAVLDAFAVSLKAHADELANCIGEETGKPLWESATEVTSMVNKIAISVQSYRERTGEKSAPLGDATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVLFKPSELTPKVAELTVKCWIEAGLPAGVLNLLQGGRETGIALAANPGIDGLFFTGSSRTGNALHQQFAGRPDKILALEMGGNNPLVVDQVQDIDAAVYTIIQSAFISAGQRCTCARRLLVPEGDWGDALLARLVAVSATLDVGAFDQQPAPFMGSVISLEAARALLDAQRHLLANGAVTLLEMRQPQPGAALLTPGIVDVSAVANRPDVELFGPLLQVVRYAGFDAAIAEANATQYGLAAGLLSDSEARYQQFWLQSRAGIVNWNKQLTGAASSAPFGGVGASGNHRASAYYAADYCAYPVASLETGSLTLPATLTPGVRLS

Annotated regions:
phrase: WQAGQGELFHSLNPVTLHVLWSGQGATAEQVDHAVQAARQAFPAWALLSLDQRIAVLDAFAVSLKAHADELANCIGEETGKPLWESATEVTSMVNKIAISVQSYRERTGEKSAPLGDATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVLFKPSELTPKVAELTVKCWIEAGLPAGVLNLLQGGRETGIALAANPGIDGLFFTGSSRTGNALHQQFAGRPDKILALEMGGNNPLVVDQVQDIDAAVYTIIQSAFISAGQRCTCARRLLVPEGDWGDALLARLVAVSATLDVGAFDQQPAPFMGSVISLEAARALLDAQRHLLANGAVTLLEMRQPQPGAALLTPGIVDVSAVANRPDVELFGPLLQVVRYAGFDAAIAEANATQYGLAAGLLSDSEARYQQFWLQSRAGIVNWNKQLTGAASSAPFGGVGASGNHRASAYYAA
type: DOMAIN
name: Aldehyde_DH_dom
description: Aldehyde dehydrogenase domain

phrase: FISAGQRCTCA
type: CONSERVED_SITE
name: Ald_DH_CS_CYS
description: Aldehyde dehydrogenase, cysteine active site

phrase: LEMGGNN
type: CONSERVED_SITE
name: Ald_DH_CS_GLU
description: Aldehyde dehydrogenase, glutamic acid active site
Protein sequence:
MQTLSTPSTTATEFDTVIHRRPTRSVRVGDIWIGSRHPVVVQSMINEDTLDIDGSVAAIRRLHEIGCEIVRVTVPSLGHAKAVGDIKKKLQDTYRDVPLVADVHHNGMKIALEVAKHVDKVRINPGLYVFEKPDPNRQGYTPEEFERIGKQIRDTLEPLVTSLREQDKAMRIGVNHGSLAERMLFTYGDTPEGMVESALEFLRLCEEMDFRNLVISMKASRAPVMMAAYRLMAKRMDDLGMDYPLHLGVTEAGDGDYGRIKSTVGIGTLLAEGIGDTIRVSLTEAPENEIPVCYSILQALGLRKTMVEYVACPSCGRTLFNLEEVLHKVRAATNHLVGLDIAVMGCIVNGPGEMADADYGYVGKTPGTIALYRGRDEIKRVPEEQGVEELINLIKADGRWVEPEPIA

Annotated regions:
Protein sequence:
MEAFAAESGGMPQLNPEFWVSQIFWLIITFGILYVVLSKLILPKISANLENRKSQILENIEAAEKQREESEQKIEEYEKIVQSSKNEAKNYFKQAREKVLKDIGVKREILEKELDEEVNKAEIEIKTFRDNAPEKIKKIAVETSSDLLQELIGAEVNSSSISAIVEDLSRKKMDEYYGN

Annotated regions:
Protein sequence:
MTSISQTTTIAAQATAPGRGGVGIIRVSGPEAKNVAQAILGKLPEVRKAEYLPFLDCTSTDKTQVLDQGIALYFKAPNSFTGEDVIEFQGHGGPVILDMLLKVILAQPKVIMAKPGEFSEQAFLNDKLDLTQAEAIADLINSSSEQAARSALHSLQGDFSKLVNEMVESIIHLRMYVEAAIDFPEEEIDFLADKKIVTDLKAIISRVEDVRKQAQQGSIIREGMRVVIAGRPNAGKSSLLNALSGKQTAIVTDIAGTTRDVLAEQIHIDGMPLHIIDTAGLRDSDDVVEKIGIERAWQEINQADRVLLMVDASEDHSILEDDQDIKDFYPEFFAKLPEKIGLTLIRNKADVNDAKTGFTEFTDTDGTQHAIITLSAKTGKGVDSLKEHLKTIMGYQGGTEGGFMARRRHLVALENTHQHLLTGLDQLESYVAGEILAEELRICQQELDQITGEFTSDDLLGKIFSSFCIGK

Annotated regions:
phrase: GMRVVIAGRPNAGKSSLLNALSGKQTAIVTDIAGTTRDVLAEQIHIDGMPLHIIDTAGLRDSDDVVEKIGIERAWQEINQADRVLLMVDASEDHSILEDDQDIKDFYPEFFAKLPEKIGLTLIRNKADVNDAKTGFTEFTDTDGTQHAIITLSAKTGKGVDSLK
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: GMRVVIAGRPNAGKSSLLNALSGKQTAIVTDIAGTTRDVLAEQIHIDGMPLHIIDTAGLRDSDDVVEKIGIERAWQEINQADRVLLMVDASEDHSILEDDQDIKDFYPEFFAKLPEKIGLTLIRNKADVNDAKTGFTEFTDTDGTQHAIITLSAKTGKGVDSLKEHLKTIM
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain

phrase: LTQAEAIADLINSSSEQAARSALHSLQGDFSKLVNEMVESIIHLRMYVEAAIDFPEEEIDFLADKKIVTDLKAIISRVEDVRKQAQQGSIIREGMRVVIAGRPNAGKSSLLNALSGKQTAIVTDIAGTTRDVLAEQIHIDGMPLHIIDTAGLRDSDDVVEKIGIERAWQEINQADRVLLMVDASEDHSILEDDQDIKDFYPEFFAKLPEKIGLTLIRNKADVNDAKTGFTEFTDTDGTQHAIITLSAKTGKGVDSLKEHLKTIMGYQGGTEGGFMARRRHLVALENTHQHLLTGLDQLESYVAGEILAEELRICQQELDQITGEFTSDDLLGKIFSSF
type: DOMAIN
name: MnmE_helical
description: MnmE, helical domain

phrase: PGRGGVGIIRVSGPEAKNVAQAILGKLPEVRKAEYLPFLDCTSTDKTQVLDQGIALYFKAPNSFTGEDVIEFQGHGGPVILDMLLKVILAQPKVIMAKPGEFSEQAFL
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal

phrase: RVVIAGRPNAGKSSLLNALSGKQTAIVTDIAGTTRDVLAEQIHIDGMPLHIIDTAGLRDSDDVVEKIGIERAWQEINQADRVLLMVDASEDHSILEDDQDIKDFYP
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: REGMRVVIAGRPNAGKSSLLNALSGKQTAIVTDIAGTTRDVLAEQIHIDGMPLHIIDTAGLRDSDDVVEKIGIERAWQEINQADRVLLMVDASEDHSILEDDQDIKDFYPEFFAKLPEKIGLTLIRNKADVNDAKTGFTEFTDTDGTQHAIITLSAKTGKGVDSLKEHLKTIM
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain

phrase: TIAAQATAPGRGGVGIIRVSGPEAKNVAQAILGKLPEVRKAEYLPFLDCTSTDKTQVLDQGIALYFKAPNSFTGEDVIEFQGHGGPVILDMLLKVILAQPKVIMAKPGEFSEQAFLND
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal
Protein sequence:
MIAVTTESTADILPLQLGYSGIHLLPVPLGHQGQVYSERELPPDQLVNLIRTTGEPARTLAIDDEVVARTFEAALQGSKSGRLVHVASGSRFTPHFEVAARVAGQFGVRVQVIDGGTVSYALGVQALHAAHLADQGADFGQIARALAELRERTLLTFAVESLDFLRVNGRIGNVAAFIGNWLGLRPLLAVEAGEVVSKARVRGQAAAVRTLLSATHQFQHQTGETLRLYCGHTIGGEGAAEQLQGQLQAVYRDLPAPLHPLGSGLTANVGPGVVAVLAFPRRFGLGHA

Annotated regions:
Protein sequence:
MAALGITVALLVWMATLMLISIWKQIYSRWKLPPGPFPLPIIGNILQVDIKNVPKSLAKLAEQYGPVFTLYLGSQRTVVLHGYKAVKEVLLDHKNDLSGRGEVFAFQSHKDRGITFNNGPGWKDTRRLSLSTLRDYGMGKRGNEERIQREIPFLLEALRGTRGQPFDPTFLLGFAPFNVIADILFHKHFDYSDQTGLRIQKLFNENFHLLSTGWLQLYNIFPSYLHYLPGSHRKVLRNVAELKDYSLERVKEHQESLDPTCSRDFTDCLLQELQKERYGTEPWYTLDNIAVTVADLFFAGTETTSTTLRYGLLILMKYPEVEEKLHEEIDRVIGPSRVPAIKDRLEMPYMDAVVHEIQRFIDLLPSNLPHVANQDTMFRGYVIPKGTVVIPTLDSVLFDKQEFPDPEKFKPEHFLNENGKFKYSDYFKAFSAGKRVCVGEGLARMELFLFLSAILQHFNLKSLVDPKDIDLSPCTIGFAKIPPHYKLCVVPRSG

Annotated regions:
phrase: FSAGKRVCV
type: CONSERVED_SITE
name: Cyt_P450_CS
description: Cytochrome P450, conserved site
Protein sequence:
MNKPSPPLKKRGLGRGLEALLGSKGGSSVPPTVAEGQLPGEVLRTLQITQLQPSKYQPRREMSEPKLAELADSIKAQGVIQPIIVRELDVDMFEIVAGERRWRASQLAGLTEVPVLVRELDDRTVVAMALIENIQREDLNPLEEAQALQRLIDEFSLTHAEAAEAVGRSRAAVSNLLRLLELPLGIRTLLQSRRLEMGHARALLTLAPELADKLAKEAADQGWSVREVEHRAQQFAAGKVPDIRDKKSKSPASAPAQPDIASLETELSEHLGTKVAINHGRAGKGKLVIHYTDLDVLDGVLERLRARVAD

Annotated regions:
phrase: IRTLLQSRRLEMGHARALLTLAPELADKLAKEAADQGWSVREVEHRAQ
type: DOMAIN
name: HTH_ParB/Spo0J
description: ParB/Spo0J, HTH domain

phrase: VLRTLQITQLQPSKYQPRREMSEPKLAELADSIKAQGVIQPIIVRELDVDMFEIVAGERRWRASQLAGLTEVPVLVRELDDRTVVAMALIENIQREDLNPLEEAQALQRLIDEFSLTHAEAAEAVGRSRAAVSNLLRLLELPLGIRTLLQSRRLEMGHARALLTLAPELADKLAK
type: DOMAIN
name: ParB/RepB/Spo0J
description: ParB/RepB/Spo0J partition protein

phrase: LQITQLQPSKYQPRREMSEPKLAELADSIKAQGVIQPIIVRELDVDMFEIVAGERRWRASQLAGLTEVPVLVRELDDRTVVAMALIEN
type: DOMAIN
name: ParB/Sulfiredoxin_dom
description: ParB/Sulfiredoxin

phrase: RTLQITQLQPSKYQPRREMSEPKLAELADSIKAQGVIQPIIVRELDVDMFEIVAGERRWRASQLAGLTEVPVLVRELDDRTVVAMALIEN
type: DOMAIN
name: ParB/Sulfiredoxin_dom
description: ParB/Sulfiredoxin
Protein sequence:
MAKKIIGFIKLQIPAGKANPSPPVGPALGQRGLNIMEFCKAFNAQTQSMEPGLPIPVVITAFADKSFTFIMKTPPTTIMIKKAAKIEKGSPRPHTDKVGSITRAQAEEIAKAKMPDLTAADMDAAVRTIAGSARSMGITVEGF

Annotated regions:
phrase: RTIAGSARSMGITVE
type: CONSERVED_SITE
name: Ribosomal_uL11_CS
description: Large ribosomal subunit protein uL11, conserved site

phrase: KTPPTTIMIKKAAKIEKGSPRPHTDKVGSITRAQAEEIAKAKMPDLTAADMDAAVRTIAGSARSMGIT
type: DOMAIN
name: Ribosomal_uL11_C
description: Large ribosomal subunit protein uL11, C-terminal

phrase: IKLQIPAGKANPSPPVGPALGQRGLNIMEFCKAFNAQTQSMEPGLPIPVVITAFADKS
type: DOMAIN
name: Ribosomal_uL11_N
description: Large ribosomal subunit protein uL11, N-terminal
Protein sequence:
MSIRGKHILLGVCGSIAAYKAAFLVRLFVKSGAHVQVVMTPDATQFITPLTLATLSGKPVLVDYFDAATGTWNNHVHLALAADAIVVAPASANTLAKFAQGLCDNLLCAVYLSAKSPVFIAPAMDLDMWAHGSTQANIARLRSYGNRIIPPGQGELASGLEGEGRLAEPEDILATLEAYFGETQPLAGKKALVTAGPTYEAIDPVRYIGNHSSGKMGYALAARLSLLGADVTLVSGPTHLKPPAGVTYIAVTSAGEMLDACLTHFAQSAITVMSAAVADYTPTTVADRKIKKGDDAGMIIELTRTTDILATLGQRKQKGQVLVGFALETHDELDHAKEKLQKKNLDFIVLNSARDEGAGFANDTNKITIIDRNGSMEAFGLKPKQDVARDICARIIPLLETSAGSNPGGPA

Annotated regions:
phrase: LAGKKALVTAGPTYEAIDPVRYIGNHSSGKMGYALAARLSLLGADVTLVSGPTHLKPPAGVTYIAVTSAGEMLDACLTHFAQSAITVMSAAVADYTPTTVADRKIKKGDDAGMIIELTRTTDILATLGQRKQKGQVLVGFALETHDELDHAKEKLQKKNLDFIVLNSARDEGAGFANDTNKITI
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal

phrase: KHILLGVCGSIAAYKAAFLVRLFVKSGAHVQVVMTPDATQFITPLTLATLSGKPVLVDYFDAATGTWNNHVHLALAADAIVVAPASANTLAKFAQGLCDNLLCAVYLSAKSPVFIAPAMDLDMWAHGSTQANIARLRSYGNRIIPPGQGELASGLEGEGRLAEPEDILA
type: DOMAIN
name: Flavoprotein
description: Flavoprotein
Protein sequence:
MSFVESWRSVGPRRRRQVTPGPVTRSVYSDYTQGNSWSEDGDEGCDQVARDLRAEFSARASSESKRAPLLPRIGDGSPVLPDKRNGIFPATAAKRTQARRWPIQALSILCSLLFAVLLAFLLAIAYLIVKELHTENSKNEDVVDTGLLGFWSLLIISLTAGLSCCSFSWTVTYFDSFEPGMFPPTPLSPARFKKLTGHSFHMGYSMAILNGVVAALTVAWCLM

Annotated regions:
Protein sequence:
MMSKKMKVLVVDDSPVFRALLSEIINSDPQLEVIGAAEDPYQAREMIKALKPDVLTLDIEMPKMNGVQFLKNLMRLHPLPVVMISTLTQHGADATLMALELGAVDYFPKPSVANTADMLGYRSLVNEKIRMAAQAQVGANQSMSPAVASSSAVSTSQYQLIAIGASTGGTEAVKHLLSALPASMPPIVITQHISAMFSGPFASRLDASCALSVSELTQGEVALKANHAYVAPGDKHLMVFRRGGQLYAHLDDSPAVNRHKPSVDVMFGSVAESLKGKAIGVILTGMGKDGAQGMLQMKQQGAITVAQDEQSCVVYGMPRAAVECGAAMHIKPLNKLPQFLCDLLS

Annotated regions:
phrase: MKVLVVDDSPVFRALLSEIINSDPQLEVIGAAEDPYQAREMIKALKPDVLTLDIEMPKMNGVQFLKNLMRLHPLPVVMISTLTQHGADATLMALELGAVDYFPKPSVANTADM
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: VLVVDDSPVFRALLSEIINSDPQLEVIGAAEDPYQAREMIKALKPDVLTLDIEMPKMNGVQFLKNLMRLHPLPVVMISTLTQHGADATLMALELGAVDYFPKP
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: LIAIGASTGGTEAVKHLLSALPASMPPIVITQHISAMFSGPFASRLDASCALSVSELTQGEVALKANHAYVAPGDKHLMVFRRGGQLYAHLDDSPAVNRHKPSVDVMFGSVAESLKGKAIGVILTGMGKDGAQGMLQMKQQGAITVAQDEQSCVVYGMPRAAVECGAAMHIKPLNKLPQFLCD
type: DOMAIN
name: Sig_transdc_resp-reg_Me-estase
description: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase

phrase: IAIGASTGGTEAVKHLLSALPASMPPIVITQHISAMFSGPFASRLDASCALSVSELTQGEVALKANHAYVAPGDKHLMVFRRGGQLYAHLDDSPAVNRHKPSVDVMFGSVAESLKGKAIGVILTGMGKDGAQGMLQMKQQGAITVAQDEQSCVVYGMPRAAVECGAAMHIKPLNKLPQ
type: DOMAIN
name: Sig_transdc_resp-reg_Me-estase
description: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase

phrase: STSQYQLIAIGASTGGTEAVKHLLSALPASMPPIVITQHISAMFSGPFASRLDASCALSVSELTQGEVALKANHAYVAPGDKHLMVFRRGGQLYAHLDDSPAVNRHKPSVDVMFGSVAESLKGKAIGVILTGMGKDGAQGMLQMKQQGAITVAQDEQSCVVYGMPRAAVECGAAMHIKPLNKLPQFLCDLL
type: DOMAIN
name: Sig_transdc_resp-reg_Me-estase
description: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase

phrase: KVLVVDDSPVFRALLSEIINSDPQLEVIGAAEDPYQAREMIKALKPDVLTLDIEMPKMNGVQFLKNLMRLHPLPVVMISTLTQHGADATLMALELGAVDYFPKPSVANTADMLGYRS
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain
Protein sequence:
MLTIFAVSDSIGETAQQVAMAAASQFKDNAEVKRIPYVKSLEDVEDLIKTIEDCEACMIVSTIITVNVREYLTQKCIEKNINIINVLGPIINVASTILNKYPDYNPGAMWNTDETYYKRIEAMEFAMQYDDSKDYRGLKNADVVLVGLSRTSKTPLCMYLANKGIKAINIPLVPEVGVPEELYEIDKKKIFGLTINPLQLIEIRKRRLDKFHRISADIEYASDSRILEEFEFADKILRKIGCRTIDVTQRAIEDTALIIMEKLGVK

Annotated regions:
Protein sequence:
MSTPNSDSPAAQAAKKVFSRLDLDGHNLPPSPAPSSPHNGRRYALATELVYTETKDQYGASSIPIYQSATFKQSSSNGGSEYDYTRSGNPTRTHLERHLAKIMNANRCLSVSSGMGALDVITRLLKPGDEVITGDDLYGGTNRLLTYLKNNQGVIVHHVDTTNVESVRQIISPKTTMVLLETPTNPLIKICDIPTIARITHEANEKAVVVVDNTMLSPMLFNPLDVGADIVYESGTKYLSGHHDIMAGVIAVNDTELGDKLYFTINATGCGLSPNDSFLLMRGVKTLAIRMEKQQANAQRIAEFLESHGFKVRYPGLKSHPQYDLHWSMARGAGAVLSFETGDVALSERIVEAARLWGISVSFGCVNSLISMPCRMSHASIDAKTRAERQMPEDIIRLCVGIEDADDLIDDLSRALVQAGAVTLTVDGFHANTAEGAAAAAAGSEAAETTTTAAPSL

Annotated regions:
phrase: DIVYESGTKYLSGH
type: CONSERVED_SITE
name: Cys_met_metab_PP
description: Cys/Met metabolism enzyme, pyridoxal-phosphate attachment site
Protein sequence:
MVKHQAQKKGVKRKQLKNIPSGIVHVKATFNNTIVSITDPAGNTISWASAGKVGYSGSRKSSAFAATVAAQDAAKIAMNSGLKEVEVCLKGTGAGRESAVRALIAAGLVVSVIRDETPVPHNGCRPRKRRRV

Annotated regions:
phrase: VRALIAAGLVVSVIRDETPVPH
type: CONSERVED_SITE
name: Ribosomal_uS11_CS
description: Small ribosomal subunit protein uS11, conserved site
Protein sequence:
MPNVTVALLFGGKSSEHEISIISAKAVSAHIDRTTYTLFPLYISRDGRWFKGRTARKVLDLDITGLLKSRTIETTNRQLLAMTENRDEDLFDFNFQKEGIEVAFPVLHGAYGEDGKIQGLLEVFAIPYTGCNVQSSSMTMDKEITKLCAVQAGIHVADYMTVLRPDYLNNRSAIAETIKKRFAPPFFVKPANLGSSVGIAKIHSFDELENALDEACRLDVKILVEKAIEGREVEVAVLGNEHPIASVPGEIEPGGDFYDFTDKYIDGSARLHIPARVDADTSARLQEEGIKAFRALGCSGMSRIDFFVEKGSGRIILNEINSIPGFTSISMYPMLMEHAGIGFTELIDRLVRFALEKTPA

Annotated regions:
phrase: KLCAVQAGIHVADYMTVLRPDYLNNRSAIAETIKKRFAPPFFVKPANLGSSVGIAKIHSFDELENALDEACRLDVKILVEKAIEGREVEVAVLGNEHPIASVPGEIEPGGDFYDFTDKYIDGSARLHIPARVDADTSARLQEEGIKAFRALGCSGMSRIDFFVEKGSGRIILNEINSIPGFTSISMYPMLMEHAGIGFTELIDRLV
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold

phrase: HGAYGEDGKIQ
type: CONSERVED_SITE
name: D-Ala_lig_Van_CS
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site

phrase: LGCSGMSRIDFFVEKGSGRIILNEINSIP
type: CONSERVED_SITE
name: D-Ala_lig_Van_CS
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site

phrase: VALLFGGKSSEHEISIISAKAVSAHIDRTTYTLFPLYISRDGRWFKGRTARKVLDLDITGLLKSRTIETTNRQLLAMTENRDEDLFDFNFQKEGIEVAFPVLHGAYGEDGKIQGLLEVFAIPYTG
type: DOMAIN
name: Dala_Dala_lig_N
description: D-alanine--D-alanine ligase, N-terminal domain

phrase: QAGIHVADYMTVLRPDYLNNRSAIAETIKKRFAPPFFVKPANLGSSVGIAKIHSFDELENALDEACRLDVKILVEKAIEGREVEVAVLGNEHPIASVPGEIEPGGDFYDFTDKYIDGSARLHIPARVDADTSARLQEEGIKAFRALGCSGMSRIDFFVEKGSGRIILNEINSIPGFTSISMYPMLMEHAGIGFTELIDRL
type: DOMAIN
name: Dala_Dala_lig_C
description: D-alanine--D-alanine ligase, C-terminal
Protein sequence:
MTTPGELVFIAPKAKRPPQHLADLDPSERANLARELNVPAFRIEQIAHHYFERFEIDPDVMTDLPAADRKRWIDAVLPTLLTPVRTVTCDNETTAKQLWRLHDGVMVESVVMRYPERATVCISSQAGCGMNCPFCATGQAGLTRNLSTGEIVDQVVAAARLLAEGGVGGSPVRLSNVVFMGMGEPLANYKAVMGALRRLTDKDSHGLGLSRRSITVSTVGLVPRIDQLTEENLPVTLAVSLHAPDDELRDTLVPVNTRWKVSEVLEAADRYSRSTGRRYSIEYALIKDINDQGWRADMLAQRLRGRLVHVNLIPLNPTPGSPWTASRPEDEKEFVRRLEAGGITVTVRDTRGQEIDGACGQLAAAYPQD

Annotated regions:
phrase: SSQAGCGMNCPFCATGQAGLTRNLSTGEIVDQVVAAARLLAEGGVGGSPVRLSNVVFMGMGEPLANYKAVMGALRRLTDKDSHGLGLSRRSITVSTVGLVPRIDQLTEENLPVTLAVSLHAPDDELRDTLVPVNTRWKVSEVLEAADRYSRSTGRRYSIEYALIKDINDQ
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: ATVCISSQAGCGMNCPFCATGQAGLTRNLSTGEIVDQVVAAARLLAEGGVGGSPVRLSNVVFMGMGEPLANYKAVMGALRRLTDKDSHGLGLSRRSITVSTVGLVPRIDQLTEENLPVTLAVSLHAPDDELRDTLVPVNTRWKVSEVLEAADRYSRSTGRRYSIEYALIKDINDQGWRADMLAQRLRGRLVHVNLIPLNPTPGSPWTASRPEDEKEFVRRLE
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: YPERATVCISSQAGCGMNCPFCATGQAGLTRNLSTGEIVDQVVAAARLLAEGGVGGSPVRLSNVVFMGMGEPLANYKAVMGALRRLTDKDSHGLGLSRRSITVSTVGLVPRIDQLTEENLPVTLAVSLHAPDDELRDTLVPVNTRWKVSEVLEAADRYSRSTGRRYSIEYALIKDINDQGWRADMLAQRLRGRLVHVNLIPLNPTPGSPWTASRPEDEKEFVRRLEAGGITVTVRDTRGQ
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MSAMFLLQFAIVLLCIFVGARVGGIGLGVFGGLGLAILSFGFGLKPAGLPIDVMFMIMAVVAAAAAMQAAGGLDYMIKIATKILRRNPKHITFIAPAVTWLFTLLAGTGHVAYSVLPVIAEVSRQNGIRPERPMSMAVIASQFAIVASPIAAAVVAVVAYLEPQGIHLGDVLMVTIPSTILGLFLACLFVNKMGKELKDDPEYQRRLNDPKYADIFASTTSVKEVEVSKTAKISVSLFLFGALLVVLMGAAPSIRPVFDGKPMGMAHTIEIIMLSIGALIILTCKPDGTAITKGSVFHAGMRAVIAIFGIAWLGDTLMQAHITEVKEMVKGLVETAPWAFAFALFVLSVLVNSQGATVATLFPLGIALGIPAPVLIGVFVAVNGYFFIPNYGPIIASLDFDTTGTTKIGKYILNHSFMLPGLLSMFFCLLIGLGLSHVIL

Annotated regions:
Protein sequence:
MSSSRKRLGVFTSGGDCPGLNTAIRAIVAHATLSYGWEVLGILHATQGLIERKAIPLNAEGLGGMDVLLNMGGTILGAINKGDTLGHADEVIAGYYELGLDALIAICGDGSLRILHQLAQKGNWNFLAIPKTIDNDVALTDRAIGFDTAVNTVVEALNRITSTAASHDRVFVVEVMGRTAGHLALYSGIAGGADIILIPEIPYSIEGICQHLQKLRDRWGRQFALIVVAEGSKQLEEDANHPRHCSIGQYIADKIAQHSPIPIELRVSVLGHIQRGGAPMAMDRLLAAGMGNTAVDLAAQGTFGRMVAWQAGQVVTVPIADVVAKCPRHVDPNSFLIRTAQGLGIYVGDKPMLPYVDPTLCRDQVICAI

Annotated regions:
phrase: RVSVLGHIQRGGAPMAMD
type: CONSERVED_SITE
name: Phosphofructokinase_CS
description: Phosphofructokinase, conserved site

phrase: RLGVFTSGGDCPGLNTAIRAIVAHATLSYGWEVLGILHATQGLIERKAIPLNAEGLGGMDVLLNMGGTILGAINKGDTLGHADEVIAGYYELGLDALIAICGDGSLRILHQLAQKGNWNFLAIPKTIDNDVALTDRAIGFDTAVNTVVEALNRITSTAASHDRVFVVEVMGRTAGHLALYSGIAGGADIILIPEIPYSIEGICQHLQKLRDRWGRQFALIVVAEGSKQLEEDANHPRHCSIGQYIADKIAQHSPIPIELRVSVLGHIQRGGAPMAMDRLLAAGMGNTAVD
type: DOMAIN
name: Phosphofructokinase_dom
description: Phosphofructokinase domain
Protein sequence:
MTVFKEILDNIANIKNVESYQIENIHLTSDDVLKRVIIISSDQNVEYGIRLEEDKKLMDGDILYKDDYKLVVIRLELSDVLIITAHTIGEMAKIAHNLGNRHMPAQFTETQMIVPYDYLVEEYLQDNKALYERKKIKLKEAFKHCSDAK

Annotated regions:
phrase: VESYQIENIHLTSDDVLKRVIIISSDQNVEYGIRLEEDKKLMDGDILYKDDYKL
type: DOMAIN
name: UreE_N
description: UreE urease accessory, N-terminal

phrase: ILDNIANIKNVESYQIENIHLTSDDVLKRVIIISSDQNVEYGIRLEEDKKLMDGDILYKDDYKL
type: DOMAIN
name: UreE_N
description: UreE urease accessory, N-terminal

phrase: DVLIITAHTIGEMAKIAHNLGNRHMPAQFTETQMIVPYDYLVEEYLQDNKA
type: DOMAIN
name: UreE_C_dom
description: Urease accessory protein UreE, C-terminal domain
Protein sequence:
MRVAVLGATGLVGKEMIATLEARCFPVDDFRPLSSPRSAGTKVRFDGRDWEVQAVSPEGFDGVDVAIFSAGGDASRKWAPVAAERGAVVVDNSSAWRMDPQVPLVVPEINKKAVEDRPKGIIANPNCSTIHGVMALYPLHKEAGLSRMIVTTLQSVSGSGWKALVELEDESRMVLDGNVEGANERASVYPHRIAFGAVPQVGSFDDQGYTDEEWKMVNESRKIMGAPELKVDCTCTRVPVMRGHSLSITAQFERKISPSEARAILADAPGVVLKDDPSSSIYPLATDAAGTDPVYVGRIRESLSLENGLDLWVASDNIRKGAALNAVQIAELLA

Annotated regions:
phrase: RVAVLGATGLVGKEMIATLEARCFPVDDFRPLSSPRSAGTKVRFDGRDWEVQAVSPEGFDGVDVAIFSAGGDASRKWAPVAAERGAVVVDNSSAWRMDPQVPLVVPEINKKAV
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: RVAVLGATGLVGKEMIATLEARCFPVDDFRPLSSPRSAGTKVRFDGRDWEVQAVSPEGFDGVDVAIFSAGGDASRKWAPVAAERGAVVVDNSSAWRMDPQVPLVVPEINKKAVED
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: VDCTCTRVPVMRGH
type: CONSERVED_SITE
name: Asp-semialdehyde_DH_CS
description: Aspartate-semialdehyde dehydrogenase, conserved site

phrase: LYPLHKEAGLSRMIVTTLQSVSGSGWKALVELEDESRMVLDGNVEGANERASVYPHRIAFGAVPQVGSFDDQGYTDEEWKMVNESRKIMGAPELKVDCTCTRVPVMRGHSLSITAQFERKISPSEARAILADAPGVVLKDDPSSSIYPLATDAAGTDPVYVGRIRESLSLENGLDLWVASDNIR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain
Protein sequence:
MSGDAFNMSVAYQPSGMAVPEWLNKGDNAWQMISATLVGMQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVWLCWVTWGYNMSFGHKLLPFWGKARPALGQSFLLAQAVLPQTTQFYKGGGGADAVVETPWVNPLYPMATMVYFQCVFAAITLILLAGSLLGRMNIKAWMLFVPLWLTFSYTVGAFSLWGGGFLFHWGVMDYSGGYVIHLSSGVAGFTAAYWVGPRSTKDRERFPPNNVLLMLTGAGILWMGWAGFNGGDPYSANIDSSLAVLNTNICAATSLLVWTCLDVIFFKKPSVIGAVQGMITGLVCITPGAGLVQGWAAIVMGILSGSIPWFTMMVVHKRSRLLQQVDDTLGVFHTHAVAGFLGGATTGLFAEPVLCSLFLPVTNSRGAFYPGRGGGLQFVRQVAGALFIICWNVVVTSLVCLAVRAVVPLRMPEEELAIGDDAVHGEEAYALWGDGEKYDSTKHGWYSDNNDTHHNNNKAAPSGVTQNV

Annotated regions:
phrase: DYSGGYVIHLSSGVAGFTAAYWVGP
type: CONSERVED_SITE
name: Ammonium_transpt_CS
description: Ammonium transporter, conserved site

phrase: AWQMISATLVGMQSVPGLVILYGSIVKKKWAVNSAFMALYAFAAVWLCWVTWGYNMSFGHKLLPFWGKARPALGQSFLLAQAVLPQTTQFYKGGGGADAVVETPWVNPLYPMATMVYFQCVFAAITLILLAGSLLGRMNIKAWMLFVPLWLTFSYTVGAFSLWGGGFLFHWGVMDYSGGYVIHLSSGVAGFTAAYWVGPRSTKDRERFPPNNVLLMLTGAGILWMGWAGFNGGDPYSANIDSSLAVLNTNICAATSLLVWTCLDVIFFKKPSVIGAVQGMITGLVCITPGAGLVQGWAAIVMGILSGSIPWFTMMVVHKRSRLLQQVDDTLGVFHTHAVAGFLGGATTGLFAEPVLCSLFLPVTNSRGAFYPGRGGGLQFVRQVAGALFIICWNVVVTSLVCLAVRAVVPLRMPEEELAIGDDAVHGEEA
type: DOMAIN
name: NH4_transpt_AmtB-like_dom
description: Ammonium transporter AmtB-like domain
Protein sequence:
MSDSGGFDSHPHVALIPSAGMGHLTPFLRLAASLVQHHCRVTLITTYPTVSLAETQHVSHFLSAYPQVTEKRFHLLPFDPNSANATDPFLLRWEAIRRSAHLLAPLLSPPLSALITDVTLISAVLPVTINLHLPNYVLFTASAKMFSLTASFPAIVASKSTSSGSVEFDDDFIEIPGLPPIPLSSVPPAVMDSKSLFATSFLENGNSFVKSNGVLINSFDALEADTLVALNGRRVVAGLPPVYAVGPLLPCEFEKRDDPSTSLILKWLDDQPEGSVVYVSFGSRLALSMEQTKELGDGLLSSGCRFLWVVKGKIVDKEDEESLKNVLGHELTEKIKDQGLVVKNWVDQDKVLSHRAVGGFVSHGGWNSLVEAARHGVPLLVWPHFGDQKINAEAVERAGLGMWVRSWGWGTELRAKGDEIGLKIKDLMANDFLREQAKRIEEEARKAIGVGGSSERTFKELIDKWKCNNNTH

Annotated regions:
phrase: WVDQDKVLSHRAVGGFVSHGGWNSLVEAARHGVPLLVWPHFGD
type: CONSERVED_SITE
name: UDP_glycos_trans_CS
description: UDP-glycosyltransferase family, conserved site