nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTGSDISHILKEGELEKRSDNLLQFWKRKTCVLTTDSLNIYTDQQKKNKSKELKLQSIKKVDCVEHTGKFVYFTIVTTDNKEIDFRCSDEKNCWNAVIAIALVNFQNRKAIQGFKTQKESENTSLGQQERCMARAP

Annotated regions:
phrase: HILKEGELEKRSDNLLQFWKRKTCVLTTDSLNIYTDQQKKNKSKELKLQSIKKVDCVEHTGKFVYFTIVTTDNKEIDFRCSDEKNCWNAVIAIAL
type: DOMAIN
name: PH_domain
description: Pleckstrin homology domain

phrase: LKEGELEKRSDNLLQFWKRKTCVLTTDSLNIYTDQQKKNKSKELKLQSIKKVDCVEHTGKFVYFTIVTTDNKEIDFRCSDEKNCWNA
type: DOMAIN
name: PH_domain
description: Pleckstrin homology domain

phrase: ILKEGELEKRSDNLLQFWKRKTCVLTTDSLNIYTDQQKKNKSKELKLQSIKKVDCVEHTGKFVYFTIVTTDNKEIDFRCSDEKNCWNAVIAIALVN
type: DOMAIN
name: PH_domain
description: Pleckstrin homology domain
Protein sequence:
MRVRGTQMNWPHLWKWGTLILGLVIICNASKLWVTVYYGVPVWKEADTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVKLANVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLKCTDVYNTVNCTNSTVNDTQGNCTESNLTNSSTDVSTDMKNCSFNITTILRDKQKKEYALFYRLDVVEIDNSSTYRLINCNTSTITQACPKIDFEPIPIHYCAPAGFAILKCNDKQFNGTGPCTNVSSVQCTHGIKPVVSTQLLLNGSLAEEEIIIRSENLTDNIKNIIVQFNETVNITCVRPNNNTRPSTHIGPGQALYTTKIIGDIRAAHCNVSTKWNNTLRQVAAELGKLLNKTEIIFNPSSGGDTELTTHSFNCGGEFFYCNTSGLFNSSWFINTKLNGTWENSNDTIMIPCRIKQIINMWQGVGRAMYAPPIEGLIKCSSNITGLLLTVDTVDGNSSNATFRPGGGDMRDNWRSELYKYKVVKIEPLGIAPTKAKRRVVEREKRAIGLGAMFLGFLGAAGSTMGAASVTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLKDQQLLGMWGCYGKHICTTSVPWNSSWSNRSLDDIWQNMTWMQWEREIDNYTGIIYSLIEDSQFQQEKNEKELLELDKWASLWNWFSISKWLWYIKIFIMIVGGLIGLRIVFAVLSMVNRVRQGYSPLSFQTLLPAPRGPDRPEGIEEGGGEQDRGRSIRLVNGFSALIWDDLRSL

Annotated regions:
phrase: VQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLKDQQLLGMWGCYGKHICTTSVPWNSSWSNRSLDDIWQNMTWMQWEREIDNYTGIIYSLIEDSQFQQEKNEKELLELD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASVTLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARILAVERYLKDQQLLGMWGCYGKHICTTSVPWNSSWSNRSLDDIWQNMTWMQWEREIDNYTGIIYSLIEDSQFQQEKNEKELLELDKWASLWNWFSISKWLWYIKIFIMIVGGLIGLRIVFAVLSMVNRVRQGYSPLSFQT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKEADTTLFCASDAKAYDTEVHNVWATHACVPTDPNPQEVKLANVTENFNMWKNDMVEQMHEDIISLWDQSLKPCVKLTPLCVTLKCTDVYNTVNCTNSTVNDTQGNCTESNLTNSSTDVSTDMKNCSFNITTILRDKQKKEYALFYRLDVVEIDNSSTYRLINCNTSTITQACPKIDFEPIPIHYCAPAGFAILKCNDKQFNGTGPCTNVSSVQCTHGIKPVVSTQLLLNGSLAEEEIIIRSENLTDNIKNIIVQFNETVNITCVRPNNNTRPSTHIGPGQALYTTKIIGDIRAAHCNVSTKWNNTLRQVAAELGKLLNKTEIIFNPSSGGDTELTTHSFNCGGEFFYCNTSGLFNSSWFINTKLNGTWENSNDTIMIPCRIKQIINMWQGVGRAMYAPPIEGLIKCSSNITGLLLTVDTVDGNSSNATFRPGGGDMRDNWRSELYKYKVVKIEPLGIAPTKAKRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MNCPDCGNERTRVIDTETSADGTSVRRRRECQRCSFRFTTYERPEWESLQVKKRDGTIESFDRQKLRAGIERAVEKRDVTETTVTALVDDVESELQGREARIVSSSLIGELVSESLRTLDKVAYIRFVSVYKAFSEPQEFLRELDAVLDAELDDFEASNSSQ

Annotated regions:
phrase: MNCPDCGNERTRVIDTETSADGTSVRRRRECQRCSFRFTTY
type: DOMAIN
name: NrdR-like_N
description: Transcriptional repressor NrdR-like, N-terminal domain

phrase: LQVKKRDGTIESFDRQKLRAGIERAVEKRDVTETTVTALVDDVESELQGREARIVSSSLIGELVSESLRTLDKVAYIRFVSVYKAFSEPQ
type: DOMAIN
name: ATP-cone_dom
description: ATP-cone domain

phrase: QVKKRDGTIESFDRQKLRAGIERAVEKRDVTETTVTALVDDVESELQGREARIVSSSLIGELVSESLRTLDKVAYIRFVSVYKAF
type: DOMAIN
name: ATP-cone_dom
description: ATP-cone domain
Protein sequence:
MSPQTETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVAGEENQYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPTAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCTEALYKAQTETGEIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGIHFRVLAKALRMSGGDHIHSGTVVGKLEGERDITLGFVDLLRDDFIEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNEIIRKACKWSRELAAACEVWKEIKFEFEAMDTL

Annotated regions:
phrase: YYTPDYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVAGEENQYIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPTA
type: DOMAIN
name: RuBisCO_lsu_fd_N
description: Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal

phrase: GIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCTEALYKAQTETGEIKGHYLNATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGIHFRVLAKALRMSGGDHIHSGTVVGKLEGERDITLGFVDLLRDDFIEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNEIIRKACKWSRELAAACEV
type: DOMAIN
name: RuBisCO_lsu_C
description: Ribulose bisphosphate carboxylase, large subunit, C-terminal

phrase: GLDFTKDD
type: ACTIVE_SITE
name: RuBisCo_large_chain_AS
description: Ribulose bisphosphate carboxylase, large chain, active site
Protein sequence:
MTDKVRLTTMVQAAGXAAKLGPAGLEEAIHDITRSDDPNLIVGVEGAEDAGIYRIGENLALVETTDIITPLVDDPFTFGRIAAANALSDVYAMGGRPVTAMNLAFFPACSLPTSVLAAILAGGSAALKEAGTCLVGGHTVEDDELKFGLAVTGLIDPARVVRNCTARPGDLIVITKPLGTGIISTAIKAEMIEPEVEAEATRWMTTLNAKAADLMVACRATAATDVTGFGFIGHACEMALGAKVSFKIELARVPVIPGVPALIDDGMVPAGCYRNRQHYEQHVSGNSGDPLLPLFDPQTSGGLLITFAPDDARTFLSRAGKEGLFAACIGEVEPAGGTPIVFV

Annotated regions:
phrase: EDAGIYRIGENLALVETTDIITPLVDDPFTFGRIAAANALSDVYAMGGRPVTAMNLAFFPACSLPTSVLAAILAGGSAALKEAGTCLVGGHTVEDDELKFGLAVTGL
type: DOMAIN
name: PurM-like_N
description: PurM-like, N-terminal domain

phrase: RPGDLIVITKPLGTGIISTAIKAEMIEPEVEAEATRWMTTLNAKAADLMVACRATAATDVTGFGFIGHACEMALGAKVSFKIELARVPVIPGVPALIDDGMVPAGCYRNRQHYEQHVSGNSGDPLLPLFDPQTSGGLLITFAPDDARTFLSRAGKEGLFAACIGEVEPAG
type: DOMAIN
name: PurM-like_C_dom
description: PurM-like, C-terminal domain
Protein sequence:
MKIDYLTLFPEMFEGVLNHSILKRAQDKGIINVNTINFRDYSINKHNQVDDYPFGGGQGMVLKPEPVFNAMEDINRNEHTRVILMCPQGRPFTQEIAQELSEAKHIVFICGHYEGYDERIRKHLVTDEISMGDYVLTGGELPAMTMTDAIVRLIPGVLGNQASHQDDSFSDGLLEFPQYTRPREYKNMSVPEVLLSGNHAHIDQWRHEQKLIRTYEKRPDLLEQYPLTEKDREILETYKKKLKND

Annotated regions:
phrase: KRAQDKGIINVNTINFRDYSINKHNQVDDYPFGGGQGMVLKPEPVFNAMEDINRNEHTRVILMCPQGRPFTQEIAQELSEAKHIVFICGHYEGYDERIRKHLVTDEISMGDYVLTGGELPAMTMTDAIVRLIPGVLGNQASHQDDSFSDGLLEFPQYTRPREYKNMSVPEVLLSGNHAHIDQWRHEQKLIRTYEKR
type: DOMAIN
name: tRNA_MeTrfase_TRMD/TRM10
description: tRNA methyltransferase TRMD/TRM10-type domain
Protein sequence:
MSPPSPGRRREQRRPRAAATMATPLPGRAGGPATPLSPTRLSRLQEKEELRELNDRLAHYIDRVRALELENDRLLLKISEKEEVTTREVSGIKALYESELADARRVLDETARERARLQIEIGKLRAELDEVNKSAKKREGELTVAQGRVKDLESLFHRSEVELAAALSDKRGLESDVAELRAQLAKAEDGHAVAKKQLEKETLMRVDLENRCQSLQEELDFRKSVFEEEVRETRRRHERRLVEVDSSRQQEYDFKMAQALEELRSQHDEQVRLYKLELEQTYQAKLDSAKLSSDQNDKAASAAREELKEARMRLESLSYQLSGLQKQASAAEDRIRELEEAMAGERDKFRKMLDAKEQEMTEMRDVMQQQLAEYQELLDVKLALDMEINAYRKLLEGEEERLKLSPSPSSRVTVSRATSSSSGSLSATGRLGRSKRKRLEVEEPLGSGPSVLGTGTGGSGGFHLAQQASASGSVSIEEIDLEGKFVQLKNNSDKDQSLGNWRIKRQVLEGEEIAYKFTPKYILRAGQMVTVWAAGAGVAHSPPSTLVWKGQSSWGTGESFRTVLVNADGEEVAMRTVKKSSVMRENENGEEEEEEAEFGEEDLFHQQGDPRTTSRGCYVM

Annotated regions:
phrase: QASASGSVSIEEIDLEGKFVQLKNNSDKDQSLGNWRIKRQVLEGEEIAYKFTPKYILRAGQMVTVWAAGAGVAHSPPSTLVWKGQSSWGTGESFRTVLVNADGEEVAMRT
type: DOMAIN
name: Lamin_tail_dom
description: Lamin tail domain

phrase: QEKEELRELNDRLAHYIDRVRALELENDRLLLKISEKEEVTTREVSGIKALYESELADARRVLDETARERARLQIEIGKLRAELDEVNKSAKKREGELTVAQGRVKDLESLFHRSEVELAAALSDKRGLESDVAELRAQLAKAEDGHAVAKKQLEKETLMRVDLENRCQSLQEELDFRKSVFEEEVRETRRRHERRLVEVDSSRQQEYDFKMAQALEELRSQHDEQVRLYKLELEQTYQAKLDSAKLSSDQNDKAASAAREELKEARMRLESLSYQLSGLQKQASAAEDRIRELEEAMAGERDKFRKMLDAKEQEMTEMRDVMQQQLAEYQELLDVKLALDMEINAYRKLLEGEEE
type: DOMAIN
name: IF_rod_dom
description: Intermediate filament, rod domain

phrase: INAYRKLL
type: CONSERVED_SITE
name: IF_conserved
description: Intermediate filament protein, conserved site

phrase: EKEELRELNDRLAHYIDRVRALELENDRLLLKISEKEEVTTREVSGIKALYESELADARRVLDETARERARLQIEIGKLRAELDEVNKSAKKREGELTVAQGRVKDLESLFHRSEVELAAALSDKRGLESDVAELRAQLAKAEDGHAVAKKQLEKETLMRVDLENRCQSLQEELDFRKSVFEEEVRETRRRHERRLVEVDSSRQQEYDFKMAQALEELRSQHDEQVRLYKLELEQTYQAKLDSAKLSSDQNDKAASAAREELKEARMRLESLSYQLSGLQKQASAAEDRIRELEEAMAGERDKFRKMLDAKEQEMTEMRDVMQQQLAEYQELLDVKLALDMEINAYRKLLEGEEER
type: DOMAIN
name: IF_rod_dom
description: Intermediate filament, rod domain

phrase: QEKEELRELNDRLAHYIDRVRALELENDRLLLKISEKEEVTTREVSGIKALYESELADARRVLDETARERARLQIEIGKLRAELDEVNKSAKKREGELTVAQGRVKDLESLFHRSEVELAAALSDKRGLESDVAELRAQLAKAEDGHAVAKKQLEKETLMRVDLENRCQSLQEELDFRKSVFEEEVRETRRRHERRLVEVDSSRQQEYDFKMAQALEELRSQHDEQVRLYKLELEQTYQAKLDSAKLSSDQNDKAASAAREELKEARMRLESLSYQLSGLQKQASAAEDRIRELEEAMAGERDKFRKMLDAKEQEMTEMRDVMQQQLAEYQELLDVKLALDMEINAYRKLLEGEEE
type: DOMAIN
name: IF_rod_dom
description: Intermediate filament, rod domain

phrase: FHLAQQASASGSVSIEEIDLEGKFVQLKNNSDKDQSLGNWRIKRQVLEGEEIAYKFTPKYILRAGQMVTVWAAGAGVAHSPPSTLVWKGQSSWGTGESFRTVLVNADGEEVAMRTVK
type: DOMAIN
name: Lamin_tail_dom
description: Lamin tail domain
Protein sequence:
MNTERTYAQFLDEQDDLLGFRDEFHLPYGTIYFDGNSLGLLSKQAADSLEKLLDSWKRHAIDGWTEDVEPWFYLSEKLGKMTAPLVGARMEEVIVTGSTTTNLHQLVSSFYKPHGKKTKILADALNFPSDIYALKSQLKLKGYDPNEHLIQVQSSDGNTLNTADIIKAMTDDVALIMLPGVLYRSGQILDMKTLTREAHKRGIVIGFDLCHSIGSIPHHLSDWGVDFAFWCNYKHLNGGPGCVAGLYVNKKHFGNEPGLAGWFSSSKETQFDMSHTLTAAEDAGAYQIGTPHVLSAAPLLGSLKVFQEAGIDRVRNKSLQLTKYMMELIEVELKDYQFTIANPKDDAVRGGHIYLEHTEAARICKALKADKVIPDFRTPNGIRLAPVALYNTFEEVWETVQILKTIMQEERYKKYENKRGVIA

Annotated regions:
Protein sequence:
MDVSLLLNVEGVKKTILHGGTGELPSFITGSRVTFHFRTMKCDDERTVIDDSKQVGQPMSIIIGNMFKLEVWETLLTSMRLGEVAEFWCDTIHTGVYPMLSRSLRQVAEGKDPTSWHVHTCGLANMFAYHTLGYEDLDELQKEPQPLVFLIELLQVEAPNEYQRETWNLNNEERMQAVPLLHGEGNRLYKLGRYDQAATKYQEAIVCLRNLQTKEKPWEVEWLKLEKMINTLILNYCQCLLKKEEYYEVLEHTSDILRHHPGIVKAYYMRARAHAEVWNAEEAKADLEKVLELEPSMRKAVLRELRLLESRLADKQEEERQRCRSMLG

Annotated regions:
phrase: VKAYYMRARAHAEVWNAEEAKADLEKVLELEPS
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: VPLLHGEGNRLYKLGRYDQAATKYQEAIVCLRN
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: VKAYYMRARAHAEVWNAEEAKADLEKVLELEPS
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: TGSRVTFHFRTMKCDDERTVIDDSKQVGQPMSIIIGNMFKLEVWETLLTSMRLGEVAEFWCDTIHTGVYPMLSRSLRQVAEGKDPTSWHVHTCGLANMFAYHTLGYEDLDELQKEPQPLVFLIEL
type: DOMAIN
name: PPIase_AIP
description: AIP/AIPL, N-terminal FKBP-type PPIase domain
Protein sequence:
MRAVLTVIGKDNVGIVAGVSNKLAELNINIVDVSQTIMDGYFTMMMMCDISQITKEFDEVKAELAGKGEDLQVKIHIQREEIFNAMHKL

Annotated regions:
phrase: VLTVIGKDNVGIVAGVSNKLAELNINIVDVSQTIMDGYFTMMMMCDISQITKEFDEVKAELAGKGEDLQVKIHI
type: DOMAIN
name: ACT_dom
description: ACT domain
Protein sequence:
MSLEGKNIVIGICGSIAAYKIASLVRLLVKAGCRVQIIMTPDAKEFVTPLTLATLSKNPVLADYFDKDTGDWNNHVELGLHADLLLIAPATANTLSKMAHGNCDNLLLATYLSARCPVMFAPAMDLDMWKHPATQENVNRLISFGNLLIQPAHGELASGLVGEGRLAEVEDIFLYIQRFFEKPALPLQGKKALVSAGPTYEAIDPVRFIGNHSSGKMGFAIAAALHRLGAAVTLVSGPTSLATPPGVTRIDIMSAAEMLRACQTNFPSSDIIVMSAAVADYTPVETAQQKIKKKTATFEVKLKKTTDILATLGNEKAKHQTLIGFALETDNELEHALDKLRRKNLDYIVLNSMRDTGAGFGVDTNKVSIIDRAGNITSLALKSKKAVADDICQIIIDHQKDITNS

Annotated regions:
phrase: KNIVIGICGSIAAYKIASLVRLLVKAGCRVQIIMTPDAKEFVTPLTLATLSKNPVLADYFDKDTGDWNNHVELGLHADLLLIAPATANTLSKMAHGNCDNLLLATYLSARCPVMFAPAMDLDMWKHPATQENVNRLISFGNLLIQPAHGELASGLVGEGRLAEVEDIFL
type: DOMAIN
name: Flavoprotein
description: Flavoprotein

phrase: LQGKKALVSAGPTYEAIDPVRFIGNHSSGKMGFAIAAALHRLGAAVTLVSGPTSLATPPGVTRIDIMSAAEMLRACQTNFPSSDIIVMSAAVADYTPVETAQQKIKKKTATFEVKLKKTTDILATLGNEKAKHQTLIGFALETDNELEHALDKLRRKNLDYIVLNSMRDTGAGFGVDTNKVSI
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal
Protein sequence:
MIMAAGSTGERPFFEIITSIRYWIIHAVTLPAIFIAGFLFVYTGLAYDAFGTPRPDSYFQASESKAPVVTQRYDAKSQLDLRTK

Annotated regions:
phrase: GERPFFEIITSIRYWIIHAVTLPAIFIA
type: DOMAIN
name: PSII_cyt_b559_N
description: Photosystem II cytochrome b559, N-terminal

phrase: LAYDAFGTPRPDSYFQASESKAPVVTQRYDAKSQLD
type: DOMAIN
name: PSII_cytb559_asu_lum
description: Photosystem II cytochrome b559, alpha subunit, lumenal region
Protein sequence:
MAAAKIKKGDTVVVRSGKDKGRSGTVLQVLPKDEKVVVQGVNIAARHRKPSQQNPQGGIDRFEAPLHISKVSVADKDGKPTRVRFETKDGKKVRVAVKSGETIDG

Annotated regions:
phrase: GDTVVVRSGKDKGRSGTVLQVLPKDEKVVVQGVNIAARHRKPSQQNPQGGIDRFEAPLHISK
type: DOMAIN
name: Ribosomal_uL24_KOW
description: Large ribosomal subunit protein uL24, KOW domain

phrase: KGDTVVVRSGKDKGRSGTVLQVLPKDEKVV
type: DOMAIN
name: KOW
description: KOW

phrase: KIKKGDTVVVRSGKDKGRSGTVLQVLP
type: DOMAIN
name: KOW
description: KOW
Protein sequence:
MSDHQNRGQDFSLEADSELRFEIEQKDAKVLVTLVNGFAELFGTELVKKKKYEFGMGAKVAIFTYQGCVLHVTGKMDVCYISKETPMVQYVNCHAALEQFRTEAEEKDRRGPVAMVVGPTDVGKSTLCRILLNYAVRVGRRPLYADLDVGQGAIAISGNVATILIERPASVEEGFPKTAPLVYHFGHKSPSGNSVLYNAVVSKMAEVTLQSLNGNKRTKSSGIIVNTCGWVKGHGYAHLLHAARAYGACAIFVLDQERLYNELLRDVPSSVHVVLLPKSGGVVERSKELRHECRDQRIKEYFYGNARAPFYPFSFEVKFQELRLYKIGAPPLPDSCMPIGMKAEDNKTKVVAVTPTPALIHHVLALSFAESVDDDVIGTNIAGFCCVTEVDMERQVVMLLSPQPRPLPPNALLLWSELQFMDNHT

Annotated regions:
phrase: LEADSELRFEIEQKDAKVLVTLVNGFAELFGTELVKKKKYEFGMGAKVAIFTYQGCVLHVTGKMDVCYISKETPMVQYVNCHAALEQFRTE
type: DOMAIN
name: Clp1_N
description: Clp1, N-terminal beta-sandwich domain

phrase: YPFSFEVKFQELRLYKIGAPPLPDSCMPIGMKAEDNKTKVVAVTPTPALIHHVLALSFAESVDDDVIGTNIAGFCCVTEVDMERQVVMLLSPQPRPLPPNALLLWSELQFM
type: DOMAIN
name: Clp1_C
description: Pre-mRNA cleavage complex subunit Clp1, C-terminal

phrase: GPTDVGKSTLCRILLNYAVRVGRRPLYADLDVGQGAIAISGNVATILIERPASVEEGFPKTAPLVYHFGHKSPSGNSVLYNAVVSKMAEVTLQSLNGNKRTKSSGIIVNTCGWVKGHGYAHLLHAARAYGACAIFVLDQERLYNELLRDVPSSVHVVLLPKSGGVVERSKELRHECRDQRIKEYFY
type: DOMAIN
name: CLP1_P
description: Polyribonucleotide 5'-hydroxyl-kinase Clp1, P-loop domain
Protein sequence:
MLAWQDVGAKAAPSHHKISFSVLDILDPQKFTRAALPPVRLAALEAKKSLEEVEAGQDACSGNPIGSQETPDAVGRGIDPGSPVEGSEAEEEEEAEDAGRAHQPERWQGVHEGSPEARAVAVGTEESGAEGLPASPGSPGSPRPRRRRAESSCAKPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPGADGAVQAGGGAPQPGTPGAVAGGGGSATGSSPGPPVPGALPYQTFPTYPATNVLFPAASFPLTTAANGSPFTPFLGPSYLTPFYAPHL

Annotated regions:
phrase: RRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ
type: DOMAIN
name: HD
description: Homeodomain

phrase: PRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQNPG
type: DOMAIN
name: HD
description: Homeodomain

phrase: RRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWK
type: DOMAIN
name: HD
description: Homeodomain

phrase: TRYLSVCERLN
type: DOMAIN
name: HD_metazoa
description: Homeodomain, metazoa

phrase: LSLTETQVKI
type: DOMAIN
name: HD_metazoa
description: Homeodomain, metazoa

phrase: WFQNRRTKW
type: DOMAIN
name: HD_metazoa
description: Homeodomain, metazoa

phrase: AKPRRARTAFTYEQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK
type: DOMAIN
name: HD
description: Homeodomain

phrase: LALSLSLTETQVKIWFQNRRTKW
type: CONSERVED_SITE
name: Homeobox_CS
description: Homeobox, conserved site
Protein sequence:
MARIAGVDLPRNKRIEIGLTYIYGIGLTSSQSILKVATVDSNIRCKDLTDEDISKIRQIIDEDYLVEGVARRIETMSIKRLMEINCVKGRRHRDGLPLRGQRTRTNARTRRGSKKTVAGKKKA

Annotated regions:
phrase: KGRRHRDGLPLRG
type: CONSERVED_SITE
name: Ribosomal_uS13_CS
description: Small ribosomal subunit protein uS13, conserved site
Protein sequence:
MPAYFQRPENALKRANEFLEVGKKQPALDVLYDVMKSKKHRTWQKIHEPIMLKYLELCVDLRKSHLAKEGLYQYKNICQQVNIKSLEDVVRAYLKLAEEKTEAAKEESQQMVLDIEDLDNIQTPESVLLSAVSGEDTQDRTDRLLLTPWVKFLWESYRQCLDLLRNNSRVERLYHDIAQQAFKFCLQYTRKAEFRKLCDNLRMHLSQIQRHHNQSTAINLNNPESQSMHLETRLVQLDSAISMELWQEAFKAVEDIHGLFSLSKKPPKPQLMANYYNKVSTVFWKSGNALFHASTLHRLYHLSREMRKNLTQDEMQRMSTRVLLATLSIPITPERTDIARLLDMDGIIVEKQRRLATLLGLQAPPTRIGLINDMVRFNVLQYVVPEVKDLYNWLEVEFNPLKLCERVTKVLNWVREQPEKEPELQQYVPQLQNNTILRLLQQVAQIYQSIEFSRLTSLVPFVDAFQLERAIVDAARHCDLQVRIDHTSRTLSFGSDLNYATREDAPIGPHLQSMPSEQIRNQLTAMSSVLAKALEVIKPAHILQEKEEQHQLAVTAYIKNSRKEHQRILARRQTIEERKERLESLNIQREKEELEQREAELQKVRKAEEERLRQEAKEREKERILQEHEQIKKKTVRERLEQIKKTELGAKAFKDIDIEDLEELDPDFIMAKQVEQLEKEKKELQERLKNQEKKIDYFERAKRLEEIPLIKSAYEEQRVKDMDLWEQQEEERITTMQLEREKALEHKNRMSRMLEDRDLFVMRLKAARQSVYEEKLKQFEERLAEERHNRLEERKRQRKEERKITYYREKEEEEQRRAEEQMLKEREERERAERAKREEELREYQERVKKLEEVERKKRQRELEIEERERRREEERRLGEDPLSRKDSRWGDRDSEGTWRKGPEADSEWRRGPPEKEWRRETRDDERPHRRDEDRLRRLGGDDEERESSLRPDDDRIPRRGLDDDRGPRRGPDEDRFSRRGTDDDRPSWRNADDDRPPRRIGDDDRGSWRHTDDDRPPRRGLDDDRPPRRGLDDERGSWRTAEEDRGPRRGMDDDRGPRRGGADDERSSWRNADDDRGPRRGMDDDRGPRRGLDDDRGPWRNAAEDRISRRGADDDRGPWRNMDDDRVPRRGDDARPGPWRPFVKPGGWREKEKAREESWGPPRESRPPEEREWDRDKEKDRDNQDREENDKDLERDRDRERDGDREDRFRRPRDEGGWRRGPAEESSSWRDSSRRDDRDRDDRRRDRDDRRDLRDLRDRRDLRDDRDRRGPPLRSEREEASSWRRTDDRKDDRTEERDPPRRVPPPTLSRERERERDREGEKEKASWRAEKDRESLRRTKNETDEDGWTTVRR

Annotated regions:
phrase: QYVPQLQNNTILRLLQQVAQIYQSIEFSRLTSLVPFVDAFQLERAIVDAARHCDLQVRIDHTSRTLSFGSDLNYATREDA
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain

phrase: MQRMSTRVLLATLSIPITPERTDIARLLDMDGIIVEKQRRLATLLGLQAPPTRIGLINDMVRFNVLQYVVPEVKDLYNWLEVEFNPLKLCERVTKVLNWVREQPEKEPELQQYVPQLQNNTILRLLQQVAQIYQSIEFSRLTSLVPFVDAFQLERAIVDAARHCDLQVRIDHTSRTLSFGSDL
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain

phrase: ENALKRANEFLEVGKKQPALDVLYDVMKSKKHRTWQKIHEPIMLKYLELCVDLRKSHLAKEGLYQYKNICQQVNIKSLEDVVRAYLKLAEEKTEAAKEESQQMVLDIEDLDNIQTPESVLLSAVSGEDTQDRTDRLLLTPWVKFLWESYRQCLDLLRNNSRVERLYHDIAQQAFKFCLQYTRKAEFRKLCDNLRMHLSQIQRHHNQSTAINLNNPESQSMHLETRLVQLDSAISMELWQEAFKAVEDIHGLFSLSKKPPKPQLMANYYNKVSTVFWKSGNALFHASTLHRLYHLSREMRKNLTQDEMQRMSTRVLLATLSIPITPERTDIARLLDMDGIIVEKQRRLATLLGLQAPPTRIGLINDMVRFNVLQYVVPEVKDLYNWLEVEFNP
type: DOMAIN
name: eIF3a_PCI_TPR-like
description: eIF3a, PCI domain, TPR-like region

phrase: EQPEKEPELQQYVPQLQNNTILRLLQQVAQIYQSIEFSRLTSLVPFVDAFQLERAIVDAARHCDLQVRIDHTSRTLSF
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain
Protein sequence:
MDVDNGEGQVQVHLKTKQEQYAVPDVPYAIDGTVTTVELNTFVNALLRQKDGSSDTDFDFLVFDEYLRGRLCDHLREKAISFEDAIEIEYVERFPAPEPQDCLLHDDWVSAVKARGKWILSGCYDNSLNLWTNKGKHILTISGHTAPIKAVDWISLDEETGRFVSTSQDQTAMLWKWNVGSNAVDCVSVCKGHERGVDSVSVSPDGLRFATGSWDTMLKVWSAELDDGVEGSSKRMKESGVRTPKITLQGHRESVSAVQWMDATTLLTGSWDYTLKVWDLSLEGIKTEISTNKSIFDASYSKLNRLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNKLWDCRSPKAPLYDLLGHGDKVLDIDWSNPKYIVSGGVDNTVRVFKSRKALAEDTETK

Annotated regions:
phrase: LLTGSWDYTLKVWD
type: CONSERVED_SITE
name: WD40_repeat_CS
description: WD40 repeat, conserved site

phrase: HDDWVSAVKARGKWILSGCYDNSLNL
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: NTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNKLW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: PLYDLLGHGDKVLDIDWSNPKYIVSGGVDNTVRV
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: PKITLQGHRESVSAVQWMDATTLLTGSWDYTLKVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: KSIFDASYSKLNRLILTASADKNLRLY
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: GKHILTISGHTAPIKAVDWISLDEETGRFVSTSQDQTAML
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: DCVSVCKGHERGVDSVSVSPDGLRFATGSWDTMLKVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: CKGHERGVDSVSVSPDGLRFATGSWDTMLKVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: FATGSWDTMLKVWS
type: REPEAT
name: G-protein_beta_WD-40_rep
description: G-protein beta WD-40 repeat

phrase: LLTGSWDYTLKVWD
type: REPEAT
name: G-protein_beta_WD-40_rep
description: G-protein beta WD-40 repeat

phrase: FVSGAYDNQNKLWD
type: REPEAT
name: G-protein_beta_WD-40_rep
description: G-protein beta WD-40 repeat

phrase: KGKHILTISGHTAPIKAVDWISLDEETGRFVSTSQDQTAMLW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: GSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNKLW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: AVDCVSVCKGHERGVDSVSVSPDGLRFATGSWDTMLKVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: VRTPKITLQGHRESVSAVQWMDATTLLTGSWDYTLKVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: SLEGIKTEISTNKSIFDASYSKLNRLILTASADKNLRLY
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: PKAPLYDLLGHGDKVLDIDWSNPKYIVSGGVDNTVRVF
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: APEPQDCLLHDDWVSAVKARGKWILSGCYDNSLNLW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LQGHRESVSAVQWMDATTLLTGSWDYTLKVWDL
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: YLGHNAWVQTVMWSTTEEFLFVSGAYDNQNKLW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LLGHGDKVLDIDWSNPKYIVSGGVDNTVRVF
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: VQVHLKTKQEQYAVPDVPYAIDGTVTTVELNTFVNALLRQKDGSSDTDFDFLVFDEYLRGRLCDH
type: DOMAIN
name: NLE
description: NLE
Protein sequence:
MASQGTKRSYEQMETDGERQNATEIRASVGRMIGGIGRFYIQMCTELKLNDYEGRLIQNSLTIERMVLSAFDERRNKYLEEHPSAGKDPKKTGGPIYKRVDGKWVRELVLYDKEEIRRIWRQANNGDDATAGLTHIMIWHSNLNDTTYQRTRALVRTGMDPRMCSLMQGSTLPRRSGAAGAAVKGVGTMVLELIRMIKRGINDRNFWRGENGRKTRIAYERMCNILKGKFQTAAQRAMMDQVRESRNPGNAEIEDLTFLARSALILRGSVAHKSCLPACVYGPAVASGYDFEKEGYSLVGVDPFKLLQTSQVYSLIRPNENPAHKSQLVWMACNSAAFEDLRVSSFIRGTRVLPRGKLSTRGVQIASNENMDAIVSSTLELRSRYWAIRTRSGGNTNQQRASAGQISTQPTFSVQRNLPFDKTTIMAAFTGNAEGRTSDMRAEIIKMMESARPEEVSFQGRGVFELSDERATNPIVPSFDMSNEGSYFFGDNAEEYDN

Annotated regions:
Protein sequence:
MNLSNLWQSCLLQLQDQVSASDLSTWLRPLQADVVADNHIVLYASNMFVKGWVETHYLAQIQQICQTLAQNPELRISLKEGVKPAPKIVESTPNTSLRSESAVDFQAESSASVKFESHLNTKHLFDNFVEGKSNQLARAVGQKLAQAPGEPSANPFFLYGGTGLGKTHLLHAIGNGILADKPNARVLYIHANNFMQHMVKAVRDNKMDQFKKFYRSLDALLVDDIQFFAEKEKTQEEFFHIFNSLFETGRQIILTSDRYPKEIEKIEERLKSRFGWGLTTAIEPPDLETRVAILLKKAEEHNMNLPEEVAFFIAQRLRTNVRELEGALNRVKAMQDFKGGDIDIDFVRDTLKDILALQERLVTIENIQKVVAEYYRIKVSDLKSKSRARSVTRPRQIAMALAKELTNRSLPEIGRAFDRDHTTVLNACREVPKFREQDNSIQEDWANLIRTLSA

Annotated regions:
phrase: LNTKHLFDNFVEGKSNQLARAVGQKLAQAPGEPSANPFFLYGGTGLGKTHLLHAIGNGILADKPNARVLYIHANNFMQHMVKAVRDNKMDQFKKFYRSLDALLVDDIQFFAEKEKTQEEFFHIFNSLFETGRQIILTSDRYPKEIEKIEERLKSRFGWGLT
type: DOMAIN
name: DnaA_dom
description: Chromosomal replication initiator protein DnaA, ATPAse domain

phrase: TIENIQKVVAEYYRIKVSDLKSKSRARSVTRPRQIAMALAKELTNRSLPEIGRAFDRDHTTVLNACRE
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: IENIQKVVAEYYRIKVSDLKSKSRARSVTRPRQIAMALAKELTNRSLPEIGRAFDRDHTTVLNACREVPKFREQDNSIQEDWANLIRT
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: IGRAFDRDHTTVLNACRE
type: CONSERVED_SITE
name: Chromosome_initiator_DnaA_CS
description: Chromosomal replication control, initiator DnaA, conserved site

phrase: IENIQKVVAEYYRIKVSDLKSKSRARSVTRPRQIAMALAKELTNRSLPEIGRAFDRDHTTVLNACRE
type: DOMAIN
name: DnaA_C
description: Chromosomal replication initiator, DnaA C-terminal

phrase: SANPFFLYGGTGLGKTHLLHAIGNGILADKPNARVLYIHANNFMQHMVKAVRDNKMDQFKKFYRSLDALLVDDIQFFAEKEKTQEEFFHIFNSLFETGRQIILTSDRYPKEIEKIEERLKSRFGWGLT
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: NLWQSCLLQLQDQVSASDLSTWLRPLQADVVADNHIVLYASNMFVKGWVETHYLAQIQQIC
type: DOMAIN
name: DnaA_N_dom
description: DnaA N-terminal domain
Protein sequence:
MKNPKKKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPIRMVLAILAXLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKKRRGADTSVGIVGLLLTTAMAAEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTTSTWVVYGTCHHKKGEARRSRRAVTLPSHSTRKLQTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQKVIYLVMILLIAPAYSIRCIGVSNRDFVEGMSGGTWVDVVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNGCGLFGKGSLVTCAKFACSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHETDENRAKVEITPNSPRAEATLGGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWFHDIPLPWHAGADTGTPHWNNKEALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAEMDGAKGRLSSGHLKCRLKMDKLRLKGVSYSLCTAAFTFTKIPAETLHGTVTVEVQYAGTDGPCKVPAQMAVDMQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVGEKKITHHWHRSGSTIGKAFEATVRGAKRMAVLGDTAWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX

Annotated regions:
phrase: STIGKAFEATVRGAKRMAVLGDTAW
type: DOMAIN
name: Flavi_E_Stem/Anchor_dom
description: Flavivirus envelope glycoprotein E, Stem/Anchor domain

phrase: RCIGVSNRDFVEGMSGGTWVDVVL
type: DOMAIN
name: Flavi_Glycoprot_E_cen/dimer
description: Envelope glycoprotein E, central and dimerisation domain, flavivirus

phrase: XGNGCGLFGKGSLVTCAKFACSKKMTGKSIQPENLEYRIMLSVHGSQHSGMIVNDTGHETDENRAKVEITPNSPRAEATLGGFGSLGLDCEPRTGLDFSDLYYLTMNNKHWLVHKEWFHDIPLPWHAGADTGTPHWNNKEALVEFKDAHAKRQTVVVLGSQEGAVHTALAGALEAEMDGAKGRLSSGHLKCRLKMDKLRLK
type: DOMAIN
name: Flavi_Glycoprot_E_cen/dimer
description: Envelope glycoprotein E, central and dimerisation domain, flavivirus

phrase: AFTFTKIPAETLHGTVTVEVQYAGTDGPCKVPAQMAVDMQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVGEKKITHHWHR
type: DOMAIN
name: Flavi_E_Ig-like
description: Glycoprotein E, immunoglobulin-like domain, flavivirus

phrase: VTLPSHSTRKLQTRSQTWLESREYTKHLIRVENWIFRNPGFALAAAAIAWLLGSSTSQKVIYLVMILLIAPAY
type: DOMAIN
name: Env_glycoprot_M_flavivir
description: Envelope glycoprotein M, flavivirus

phrase: KKSGGFRIVNMLKRGVARVSPFGGLKRLPAGLLLGHGPIRMVLAILAXLRFTAIKPSLGLINRWGSVGKKEAMEIIKKFKKDLAAMLRIINARKEKKRRGADTSVGIVGLLLTTAM
type: DOMAIN
name: Flavi_capsidC
description: Capsid protein C, flavivirus

phrase: SYSLCTAAFTFTKIPAETLHGTVTVEVQYAGTDGPCKVPAQMAVDMQTLTPVGRLITANPVITESTENSKMMLELDPPFGDSYIVIGVGEKKITHHWH
type: DOMAIN
name: Flavi_E_Ig-like
description: Glycoprotein E, immunoglobulin-like domain, flavivirus