nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MATKYIFVTGGVVSSIGKGISVASIGRILKSRGISVSVLKLDPYLNVDPGTMSPYQHGEVFVTIDGGETDLDLGHYERFIDEDLTRSSNLTAGQVYLSLLAKERRGDFLGGTIQAVPHVTNEIKDKVIALADESLADVIVVEVGGTVGDIEGLPFLEAIRQIRNDVGRENVLYIHLTLLPYLSAARELKTKPTQHSVKELRGIGIQPDAILCRSDYPVPDAIRGKISSFCDVSERAVIPLTTVDNVYQVPLILEEAGLGDIITEHLSLPAKPRDLADWSAMVERMNNLTEVVSIALVGKYVEYPDSYISVKEALRHAGLAHDREVEIQWVHSEDVERQGPDALLANACGIVVPGGFGSRGVEGMVETVRYAREHQVPYLGLCLGLQVMVIEWARNQMDLKNANSSELDPDTPHPVIHIMPEQQSVTTMGGTMRLGSYPCQPQENTLTKNAYGNGVVNERHRHRFELNNSYREALENSGFVIGGVSPDGNLVETGEINDHPFMVGVQYHPEFQSRPNRPHPLFAGFIDAARKTIREGGQQPLPLPDDKRN

Annotated regions:
phrase: PDSYISVKEALRHAGLAHDREVEIQWVHSEDVERQGPDALLANACGIVVPGGFGSRGVEGMVETVRYAREHQVPYLGLCLGLQVMVIEWARNQMDLKNANSSELDPDTPHPVIHIMPEQQSVTTMGGTMRLGSYPCQPQENTLTKNAYGNGVVNERHRHRFELNNSYREALENSGFVIGGVSPDGNLVETGEINDHPFMVGVQYHPEFQSRPNRPHPLFAGFI
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: KYIFVTGGVVSSIGKGISVASIGRILKSRGISVSVLKLDPYLNVDPGTMSPYQHGEVFVTIDGGETDLDLGHYERFIDEDLTRSSNLTAGQVYLSLLAKERRGDFLGGTIQAVPHVTNEIKDKVIALADESLADVIVVEVGGTVGDIEGLPFLEAIRQIRNDVGRENVLYIHLTLLPYLSAARELKTKPTQHSVKELRGIGIQPDAILCRSDYPVPDAIRGKISSFCDVSERAVIPLTTVDNVYQVPLILEEAGLGDIIT
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: VSIALVGKYVEYPDSYISVKEALRHAGLAHDREVEIQWVHSEDVERQGPDALLANACGIVVPGGFGSRGVEGMVETVRYAREHQVPYLGLCLGLQVMVIEWARNQMDLKNANSSELDPDTPHPVIHIMPEQQSVTTMGGTMRLGSYPCQPQENTLTKNAYGNGVVNERHRHRFELNNSYREALENSGFVIGGVSPDGNLVETGEINDHPFMVGVQYHPEFQSRPNRPHPLFAGF
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain

phrase: KYIFVTGGVVSSIGKGISVASIGRILKSRGISVSVLKLDPYLNVDPGTMSPYQHGEVFVTIDGGETDLDLGHYERFIDEDLTRSSNLTAGQVYLSLLAKERRGDFLGGTIQAVPHVTNEIKDKVIALADESLADVIVVEVGGTVGDIEGLPFLEAIRQIRNDVGRENVLYIHLTLLPYLSAARELKTKPTQHSVKELRGIGIQPDAILCRSDYPVPDAIRGKISSFCDVSERAVIPLTTVDNVYQVPLILEEAGLGDIITEHLS
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal
Protein sequence:
MQKTYLLALLVSSLASVRSLADQTRLDLGGSFDSTDSADGGSDNVMIQKSEMNEVIASSELLSLHRSLVEIKSISDNEQAVGEFLIDYLDSKNFTVEMQYVDFDDDTGKTIRSPRRFNIFAYPGNNASPGIILTSHIDTVPPFIPYSLSHPASTSLKRDDILISGRGTVDDKASVACQVIAAMDHLEKHPDIPIGLLFVVSEEVGGKGMSTFSNSRLNSGTYHTIIFGEPTEGALVAGHKGMVSFTLRVHGKPAHSGYPWLGRSAVSEIIPILAEVDRLGDIPVSQGGLPSSEKYGRTTLNIGFMSGGVASNVVAEEAVAKVAVRLAAGDPEDAKDIIFRAIRNVATKNRNDATVVLSNGHERPKGDIEIIFGLEAYGVIDLDSDVDGFNVTTVNYGTDVPHWKIYGDNVKRYLYGPGTIFVAHGKNEALTVGEMEAGLEGYKKLVAKAVERERP

Annotated regions:
phrase: GHKGMVSFTLRVHGKPAHSGYPWLGRSAVSEIIPILAEVDRLGDIPVSQGGLPSSEKYGRTTLNIGFMSGGVASNVVAEEAVAKVAVRLAAGDPEDAKDIIFRAI
type: DOMAIN
name: Peptidase_M20_dimer
description: Peptidase M20, dimerisation domain
Protein sequence:
MPEKAEPAEGWPVVEGDYVVGDPEAPVHVVTLGSHIEEDILKAAGEDKVAIAGPCKTENIGIEKVIANVIANPNIRFGVLCGAEVTGHLTGQCFKAMYENGVDPDSGEIIGAEGAIPYLENIPEEAVERYRDQIVELVDLIDVEDVDEIVKAIEECVEKDPGAYEEGPMTISLEEEEEEELAEVAGMPVSAETVTVEYRINDVRVGVKSIGAMQRYMAGYLSGRTMGLLIGIISGMIFLFLPMVVLGGV

Annotated regions:
Protein sequence:
MMISCKKLFVFRQLPAVRRCLAAAAFSTPRATSYRILSSAGSGSTRADAPQVRRLHTTRDLLAKDYYATLGVAKNANGKDIKKAYYQLAKKYHPDTNKEDPDAGRKFQEVSEAYEVLSDEQKRREYDTYGQTAENIGRQGGGFPGGGAGGFGPEGFSQSWQFRSSIDPEELFRKIFGEGNFRTNSFDDFADSKFGFGQAQEMVMDLTFAQAARGVNKDVNVNVVDQCPKCAGTKCEPGTKPGRCQYCNGTGFETVSTGPFVMRSTCRYCQGTRQHIKYPCSECEGKGRTVQRRKVTVPVPAGIENGQTVRMQVGSKELFVTFRVERSDYFRREGADVHTDAAISLAQAVLGGTVRVQGVYEDQWINVEPGTSSHHKIMLRGKGLKRVNAHGHGDHYVHVKITVPSAKKLDKKRLALIEAYAELEEDTPGQIHGIANRKDGSKQATAGASEEPGAGAAAKASAAAAGSGASKPGPGAEESEGKDQWTDNKKTKAKEGGGSGSGQGDGGGGGFISKIKSMFN

Annotated regions:
phrase: FQEVSEAYEVLSDEQKRRE
type: CONSERVED_SITE
name: DnaJ_domain_CS
description: DnaJ domain, conserved site

phrase: EMVMDLTFAQAARGVNKDVNVNVVDQCPKCAGTKCEPGTKPGRCQYCNGTGFETVSTGPFVMRSTCRYCQGTRQHIKYPCSECEGKGRTVQRRKVTVPVPAGIENGQTVRMQVGSKELFVTFRVERSDYFRREGADVHTDAAISLAQAVLGGTVRVQGVYEDQWINVEPGTSSHHKIMLRGKGLKRVNAHGHGDHYVHVKITV
type: DOMAIN
name: DnaJ_C
description: Chaperone DnaJ, C-terminal

phrase: GVNKDVNVNVVDQCPKCAGTKCEPGTKPGRCQYCNGTGFETVSTGPFVMRSTCRYCQGTRQHIKYPCSECEGKGRTVQ
type: DOMAIN
name: HSP_DnaJ_Cys-rich_dom
description: Heat shock protein DnaJ, cysteine-rich domain

phrase: DYYATLGVAKNANGKDIKKAYYQLAKKYHPDTNKEDPDAGRKFQEVSEAYEVLSDEQKRREYDTY
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: KDYYATLGVAKNANGKDIKKAYYQLAKKYHPDTNKEDPDAGRKFQEVSEAYEVLSDEQ
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: DYYATLGVAKNANGKDIKKAYYQLAKKYHPDTNKEDPDAGRKFQEVSEAYEVLS
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: DYYATLGVAKNANGKDIKKAYYQLAKKYHPDTNKEDPDAGRKFQEVSEAYEVLSDEQKRREY
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: YATLGVAKNANGKDIKKA
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: YYQLAKKYHPDTNKE
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: DAGRKFQEVSEAYEVLSDEQ
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: KRREYDTYGQTAENIGRQG
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: CPKCAGTKCEPGTKPGRCQYCNGTGFETVSTGPFVMRSTCRYCQGTRQHIKYPCSECEGK
type: DOMAIN
name: HSP_DnaJ_Cys-rich_dom
description: Heat shock protein DnaJ, cysteine-rich domain

phrase: CPKCAGTKCEPGTKPGRCQYCNGTGFETVSTGPFVMRSTCRYCQGTRQHIKYPCSECEGK
type: DOMAIN
name: HSP_DnaJ_Cys-rich_dom
description: Heat shock protein DnaJ, cysteine-rich domain
Protein sequence:
MGPEELLTKSGVSRETLERLRLYADLLVKWQARINLVGPDTVPDLWSRHMLDSVQLFPLIKVGARRLVDLGSGAGFPGLVLAVMGAPDVHLVESDSRKCAFLREVARVTETPVTVINKRIEQVAPLGADVVTARALAPLDRLLGWAFPHLAEGGECLFLKGRGAEDELTASAKEWNITASRVPSLTDPGGLVLHLREVSRGRAQP

Annotated regions:
Protein sequence:
MSEFITVARPYAKAAFDFAVEHQSVERWQDMLAFAAEVTKNEQMAELLSGALAPETLAESFIAVCGEQLDENGQNLIRVMAENGRLNALPDVLEQFIHLRAVSEATAEVDVISAAALSEQQLAKISAAMEKRLSRKVKLNCKIDKSVMAGVIIRAGDMVIDGSVRGRLERLADVLQS

Annotated regions:
phrase: VKLNCKIDKSVMAGVIIRA
type: CONSERVED_SITE
name: ATPase_OSCP/d_CS
description: ATPase, OSCP/delta subunit, conserved site
Protein sequence:
MDKEYVGFAALPNQLHRKSVKKGFDFTLMVAGESGLGKSTLINSLFLTNLYEDRQVPDASARTTQTLTIERRGVEIEEGGIKVKLTLVDTPGFGDSVDCSDCWLPVVRFIEEQFEQYLRDESGLNRKNIQDSRVHCCLYFISPFGRGLRPLDVAFLRAVHEKVNIIPVIGKADALLPRETQVLKQKIRDQLKEEEINIYQFPECDSDEDEEFKKQNEEMKENIPFAVVGSSEVVREGTRPVRGRRYSWGTVEVENPHHCDFLNLRRMLVQTHLQDLKEVTHDLLYEGYRARCLQSLARPGARDRASRSKLSRQSATEIPLPMLPLADTEKLIREKDEELRRMQEMLEKMQAQMQQSQAQGEQSDVL

Annotated regions:
phrase: KGFDFTLMVAGESGLGKSTLINSLFLTNLYEDRQVPDASARTTQTLTIERRGVEIEEGGIKVKLTLVDTPGFGDSVDCSDCWLPVVRFIEEQFEQYLRDESGLNRKNIQDSRVHCCLYFISPFGRGLRPLDVAFLRAVHEKVNIIPVIGKADALLPRETQVLKQKIRDQLKEEEINIYQFPECDSDEDEEFKKQNEEMKENIPFAVVGSSEVVREGTRPVRGRRYSWGTVEVENPHHCDFLNLRRMLVQTHLQDLKEVTHDLLYEGYRARCLQSLA
type: DOMAIN
name: G_SEPTIN_dom
description: Septin-type guanine nucleotide-binding (G) domain

phrase: KGFDFTLMVAGESGLGKSTLINSLFLTNLYEDRQVPDASARTTQTLTIERRGVEIEEGGIKVKLTLVDTPGFGDSVDCSDCWLPVVRFIEEQFEQYLRDESGLNRKNIQDSRVHCCLYFISPFGRGLRPLDVAFLRAVHEKVNIIPVIGKADALLPRETQVLKQKIRDQLKEEEINIYQFPECDSDEDEEFKKQNEEMKENIPFAVVGSSEVVREGTRPVRGRRYSWGTVEVENPHHCDFLNLRRMLVQTHLQDLKEVTHDLLYEGYRARCLQ
type: DOMAIN
name: G_SEPTIN_dom
description: Septin-type guanine nucleotide-binding (G) domain
Protein sequence:
MSQDLSETPRRPAPLPSTAAIVVAAGKGLRAGQPLPKQFARWRGKPVLRHSVEALSSAGAAPILVVIPQGAETIAADALAGIPGVQFTNGGETRQESVRLGLEVLVASEPDLVLVHDAARPILPSAVIERLLDALVEKPGAIPVLPVADSLAHAEHADGLEVMGAPARREDLRRVQTPQAFRFPEILAAHRAWEGPTTAGDDAQVAQVAGLQIVLVEGDEALHKLTYASDFASTAPPIRVGTGYDVHRLEAGEELWLCGVRIDHTHGLSGHSDADVAIHALVDAMLGAVGRGDIGQHFPPSDPQWKGAASDRFLAHAGKLVAEAGYALGNADVTIICEAPKIGPHRDGMRARLAEILGVDPSLISVKATTTEKLGFTGRSEGIACQAAVSLIRL

Annotated regions:
phrase: IRVGTGYDVHRLEAGEELWLCGVRIDHTHGLSGHSDADVAIHALVDAMLGAVGRGDIGQHFPPSDPQWKGAASDRFLAHAGKLVAEAGYALGNADVTIICEAPKIGPHRDGMRARLAEILGVDPSLISVKATTTEKLGFTGRSEGIACQAAVSLI
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RVGTGYDVHRLEAGEELWLCGVRIDHTHGLSGHSDADVAIHALVDAMLGAVGRGDIGQHFPPSDPQWKGAASDRFLAHAGKLVAEAGYALGNADVTIICEAPKIGPHRDGMRARLAEILGVDPSLISVKATTTEKLGFTGRSEGIACQAAVS
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RVGTGYDVHRLEAGEELWLCGVRIDHTHGLSGHSDADVAIHALVDAMLGAVGRGDIGQHFPPSDPQWKGAASDRFLAHAGKLVAEAGYALGNADVTIICEAPKIGPHRDGMRARLAEILGVDPSLISVKATTTEKLGFTGRSEGIACQAAVSL
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: VEGDEALHKLTYASDFASTAPPIRVGTGYDVHRLEAGEELWLCGVRIDHTHGLSGHSDADVAIHALVDAMLGAVGRGDIGQHFPPSDPQWKGAASDRFLAHAGKLVAEAGYALGNADVTIICEAPKIGPHRDGMRARLAEILGVDPSLISVKATTTEKLGFTGRSEGIACQAAVSLI
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: IRVGTGYDVHRLEAGEELWLCGVRIDHTHGLSGHSDADVAIHALVDAMLGAVGRGDIGQHFPPSDPQWKGAASDRFLAHAGKLVAEAGYALGNADVTIICEAPKIGPHRDGMRARLAEILGVDPSLISVKATTTEKLGFTGRSEGIACQAAVS
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: VLVHDAA
type: CONSERVED_SITE
name: ISPD_synthase_CS
description: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site

phrase: SDADVAIHALVDAML
type: CONSERVED_SITE
name: MECDP_synthase_CS
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site
Protein sequence:
MAIIPKNYARLESGYREKALKIYPWVCGRCSREFVYSNLRELTVHHIDHDHTNNPEDGSNWELLCLYCHDHEHSKYTEADQYGTTVIAGEDAQKDVGEAKYNPFADLKAMMNKKK

Annotated regions:
phrase: YREKALKIYPWVCGRCSREFVYSNLRELTVHHIDHDHTNNPEDGSNWELLCLYCH
type: DOMAIN
name: HNH_nuc
description: HNH nuclease

phrase: YREKALKIYPWVCGRCSREFVYSNLRELTVHHIDHDHTNNPEDGSNWELLCLYCHDHE
type: DOMAIN
name: HNH_nuc
description: HNH nuclease

phrase: CGRCSREFVYSNLRELTVHHIDHDHTNNPEDGSNWELLCLYCHDHEHS
type: DOMAIN
name: HNH
description: HNH endonuclease
Protein sequence:
MGRKWANIVAKKTAKDGANSKVYAKFGVEIYVAAKKGDPDPETNSALKFVIDRAKQAQVPKHIIDKAIDKAKGNTDETFVEGRYEGFGPNGSMIIVDTLTSNVNRTAANVRSAFGKNGGNMGASGSVSFMFDKKGVVVFAGDDADAIFELLLEADVEVDDVEAEDGTITIIQLQLDLHKAIVALKESGIQEFNVTELEMIPQSEVSLEGDDLATFEKLYDALEDDEDVQKIYTNVDGF

Annotated regions:
phrase: RKWANIVAKKTAKDGANSKVYAKFGVEIYVAAKKGDPDPETNSALKFVIDRAKQAQVPKHIIDKAIDKAKG
type: DOMAIN
name: TACO1_YebC_N
description: TACO1/YebC-like, N-terminal domain

phrase: EGRYEGFGPNGSMIIVDTLTSNVNRTAANVRSAFGKNGGNMGASGSVSFMFDKKGVVVFAGDDADAIFELLLEADVEVDDVEAEDGTITIIQLQLDLHKAIVALKESGIQEFNVTELEMIPQSEVSLEGDDLATFEKLYDALEDDEDVQKIYTN
type: DOMAIN
name: TACO1_YebC-like_2nd/3rd_dom
description: TACO1/YebC-like, second and third domains
Protein sequence:
MAPSLLGGFTKSLAMTVLSEIGDKTFFAAAILAMRYPRKLVLAGCLTSLTVMTALSVSLGWVAPNLISRKWTHHVTTLLFFVFGILSLWEGFKEDGDSEELAEVEAELDANFKSNKAESKSKSKANDDKKKQQRPFVLQFFSPIFIKAFSITFFGEWGDKSQIATIGLAADENPFGVVLGGVLAQALCTTAAVMGGKSLASQISEKMVGLSSGVLFLLFGIMSYLSGPEGEL

Annotated regions:
Protein sequence:
MSEIGSYHDTIFALSSGRLPSGVAVIRISGPKTRFVYETICQAIPEPRHAALLTFRSRNGDAIDRGLILFFPAPHSFTGEDCAEFHLHGGKAVVEKMLAVLGELPGCRIAEAGEFTRRAFANGKMDLTIAEGLADLIAAETEGQRRLAMQVASGNQRKLYSEWRQRLINARAFIEAELDFADESDVPGSVSMQVWQQLSALKHEIEHHIASGKRAAMLRDGLHVVIVGAPNAGKSSLLNFLAGRDVAIISKEAGTTRDLLEVKLDLGGIPVYVTDTAGLRETDSVVEKIGIERARARMAEADLVLSLEDMSGPVSVTVEKIEAETWLIGTKADLGGSASGLWKYHISTMTGSGLEQLLDALQAFAEAKIGQIEDAVPTRQRHINLLRATIEEIEKAIEGDDLPLELRAENMRLASQFLGRITGDVDVEEILDVIFSQFCIGK

Annotated regions:
phrase: TIFALSSGRLPSGVAVIRISGPKTRFVYETICQAIPEPRHAALLTFRSRNGDAIDRGLILFFPAPHSFTGEDCAEFHLHGGKAVVEKMLAVLGELPGCRIAEAGEFTRRAFANG
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal

phrase: HVVIVGAPNAGKSSLLNFLAGRDVAIISKEAGTTRDLLEVKLDLGGIPVYVTDTAGLRETDSVVEKIGIERARARMAEADLVLSLEDMSGPVSVTVEKIEA
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: GLHVVIVGAPNAGKSSLLNFLAGRDVAIISKEAGTTRDLLEVKLDLGGIPVYVTDTAGLRETDSVVEKIGIERARARMAEADLVLSLEDMSGPVSVTVEKIEAETWLIGTKADLGGSASGLWKYHISTMTGSGLEQLLDALQAFA
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain

phrase: RDGLHVVIVGAPNAGKSSLLNFLAGRDVAIISKEAGTTRDLLEVKLDLGGIPVYVTDTAGLRETDSVVEKIGIERARARMAEADLVLSLEDMSGPVSVTVEKIEAETWLIGTKADLGGSASGLWKYHISTMTGSGLEQLLDALQAFA
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain

phrase: DTIFALSSGRLPSGVAVIRISGPKTRFVYETICQAIPEPRHAALLTFRSRNGDAIDRGLILFFPAPHSFTGEDCAEFHLHGGKAVVEKMLAVLGELPGCRIAEAGEFTRRAFAN
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal

phrase: HVVIVGAPNAGKSSLLNFLAGRDVAIISKEAGTTRDLLEVKLDLGGIPVYVTDTAGLRETDSVVEKIGIERARARMAEADLVLSLEDMSGP
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: LTIAEGLADLIAAETEGQRRLAMQVASGNQRKLYSEWRQRLINARAFIEAELDFADESDVPGSVSMQVWQQLSALKHEIEHHIASGKRAAMLRDGLHVVIVGAPNAGKSSLLNFLAGRDVAIISKEAGTTRDLLEVKLDLGGIPVYVTDTAGLRETDSVVEKIGIERARARMAEADLVLSLEDMSGPVSVTVEKIEAETWLIGTKADLGGSASGLWKYHISTMTGSGLEQLLDALQAFAEAKIGQIEDAVPTRQRHINLLRATIEEIEKAIEGDDLPLELRAENMRLASQFLGRITGDVDVEEILDVIFSQF
type: DOMAIN
name: MnmE_helical
description: MnmE, helical domain
Protein sequence:
MSVLGELDLLGPRAHGAACGEAVLKAVAEDFQVDEVLEIPLSGEGEHLWLWVEKRGLNTEEAARRLGRAAGVQQKNVSYAGLKDRQALTRQWFSLHLPGKADPDLGAAEGADLRILRCTRHSRKLQRGAHAANGFTLRLTGLRAERAPLDARLERIAADGVPNYFGLQRFGHGGGNLVDARSCAEQDLLPANRNLRSRFLSAGRSYLFNRLLAERVAEGSWNRAAVGDLLAFTDSRSFFLAGEEECRDARLAALDLHPTGPLWGEGDPPSGAGVLDRELALAGREPALCRWLAKAGMAHERRILRLPIQGLAWHYPEPDVLQLEFVLPAGCFATVVVREILDLVPTGQTENPCAY

Annotated regions:
phrase: GVPNYFGLQRFGHGGGNLVDARSCAEQDLLPANRNLRSRFLSAGRSYLFNRLLAERVAEGSWNRAAVGDLLAFTDSRSFFLAGEEECRDARLAALDLHPTGPLWGEGDPPSGAGVLDRELALAGREPALCRWLAKAGMAHERRILR
type: DOMAIN
name: PsdUridine_synth_TruD_insert
description: Pseudouridine synthase, TruD, insertion domain

phrase: GLKDRQALTRQWF
type: CONSERVED_SITE
name: PsdUridine_synth_TruD_CS
description: Pseudouridine synthase TruD, conserved site
Protein sequence:
MVKGEKRSEMMLNLFGDNSEEEEIESEHECNRRQPNYASDEAEGGVEPEGEGEAEVEVHGEAEAESDGEQGDVELDPGESEGEREQSSQEADPQEESEARDSDSDNKEEEHGGRVAKKRRQEVVESGSERSGEKHYESEDEEVDQTRSPRSPSEEKEEVQVAQSDVNIRNVFGSSDDEDAEEYVRNDVEQDEHRSPIEDEEGSEKDLRPDDMVLDDIIPEEDPQYESEAEHVEARYRERPVGPPLEVEVPFRPPPGDPVKMNMIKVSNIMGIDPKPFDAKTFVEEDTFMTDEPGAKNRIRLDNNIVRHRFVKSRDGKTYSESNARFVRWSDGSLQLLIGNEVLNITEQDAKEDQNHLFIKHEKGILQSQGRILKKMRFTPSSLTSNSHRLLTAIVESRQKKAFKVKNCVTDIDPEREKEKREKAESQNLKASTKLSQAREKIKRKYPLPVERRQLSTGYLEDALDEDDEDYRSNRGYEEDLEAEAQRERRILNAKKSHKGIPGRSSMTSARPSRRQMEYSESEREESEYETEEEEEEKSPARGRGKDSEDEYEEDAEEDEEERGKSNRYSDEDEEEEEVAGGRAEKDHRGSGRKRKGIESDEEESPPRKAPTHRRKAVIDDSDED

Annotated regions:
Protein sequence:
MVTMKDLLECGVHFGHQTRRWNPKTKKFIFGVRKNIHIIDLQKTLRYFRYTYNIVRDASAQGKSIMFVGTKKQANETLKEFAESIQVPYVNYRWLGGMLTNFSTIRKSVRKLEIIEEMENSGQIDLLTKKEKLMILRKKEKLDKYLGGVRHMKKIPDMIFVIDVAKEKIAVAEARKLHIPIVAPLDTNCDPDLVDYPIPGNDDAIRSIRLFCKEMSEAILEGRELMQEEIVHADENSEEIEFVSNEEKEEMLAEIQKEITQGAE

Annotated regions:
phrase: PDMIFVIDVAKEKIAVAEARKLHI
type: CONSERVED_SITE
name: Ribosomal_uS2_CS
description: Small ribosomal subunit protein uS2, conserved site

phrase: MKDLLECGVHF
type: CONSERVED_SITE
name: Ribosomal_uS2_CS
description: Small ribosomal subunit protein uS2, conserved site
Protein sequence:
MTIDNPSAFLKTLPTGSGVYQIQDAQGKVIYVGKARNLQKRVSSYFRRQLDSKTQAMMAQVQSIQTTITRNENEALLLEASFIKQFRPRYNVLLRDDKSYPYLYLATHQKFPRLDFYRGAKKAPGRYFGPYPNAGSVRENLALIQKLFKLRQCSESFFKNRTRPCLQYQIKRCTAPCVGYVNEQEYRRQVEDAILFFEGKNDQVIIKLTERMEVASENLVFEEAAHYRDQIRQLRRLQKQQIITGGKGNIDIIGIAESNGAIGFAILFIRSGRMIGHKPFFPNTPLGTTLQTALVEFIPQYYLSPLRNGDIPERIVTSEPLEDRLWIQRALSSGLNRRLAITDQKRAPYKQWQAMAALNAAQALSQHLAQKNTFALKLEAIQKSLALPNPIARIECFDISHTLGEATVASCVVFGEEGLIKKDYRRFNISGVTPGDDYGALRQALTRRYVRLKEGEGILPDVLLIDGGMGQLRQAAEVLEELQVSGVILTAIAKGPGRKAGLEKLFVWGRREEIHLPADNIAFHLIQQIRDEAHRFAITAHCNRRAKRRVESTLQEIEGIGPKRRQKLLKYFGGLQELQRASIEEIARVPGVSETLAKAIYDACHQHKG

Annotated regions:
phrase: GVYQIQDAQGKVIYVGKARNLQKRVSSYFRRQLDSKTQAMMAQVQSIQTTITRNENEALLLEASFIKQFRPRY
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: LPTGSGVYQIQDAQGKVIYVGKARNLQKRVSSYFRRQLDSKTQAMMAQVQSIQTTITRNENEALLLEASFIKQFRPRYN
type: DOMAIN
name: GIY-YIG_UvrC_Cho
description: UvrC/Cho-like, GIY-YIG domain

phrase: EEIARVPGVSETLAKAIYD
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: STLQEIEGIGPKRRQKLLK
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: QKSLALPNPIARIECFDISHTLGEATVASCVVFGEEGLIKKDYRRFNISGVTPGDDYGALRQALTRRYVRLKEGEGILPDVLLIDGGMGQLRQAAEVLEELQVSGVILTAIAKGPGRKAGLEKLFVWGRREEIHLPADNIAFHLIQQIRDEAHRFA
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: IIGIAESNGAIGFAILFIRSGRMIGHKPFFPNTPLGTTLQTALVEFIPQYYLSPLRNGDIPERIVTSEPLEDRLWIQRALSSGLNRRLAITDQKRAPYKQWQAMAALNAAQALSQHLAQKNTFALKLEAIQKSLALPNPIARIECFDISHTLGEATVASCVVFGEEGLIKKDYRRFNISGVTPGDDYGALRQALTRRYVRLKEGEGILPDVLLIDGGMGQLRQAAEV
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: TGSGVYQIQDAQGKVIYVGKARNLQKRVSSYFRRQLDSKTQAMMAQVQSIQTTITRNENEALLLEASFIKQFRPRYN
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: DQVIIKLTERMEVASENLVFEEAAHYRDQIRQLR
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: GSGVYQIQDAQGKVIYVGKARNLQKRVSSYFRRQLDSKTQAMMAQVQSIQTTITRNENEALLLEASFIKQFRPRYNVLLR
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: DQVIIKLTERMEVASENLVFEEAAHYRDQIRQLRR
type: DOMAIN
name: UVR_dom
description: UVR domain
Protein sequence:
MVSILAIRTFNPLGHFVSTQCVRAYAINSVRAGSKSSSVRAGSKNDTTRASSKKNKAGKSKLQLSARFKQNANKSQKADKFKSQKQFKYGLYGGLKENENKFLETNANLVEKITEFEELKLLPEVRKHVINLIKKDSLNTTEEIHPSPIQTIAIKRLSKNLMEPKLQVHAIAAETGSGKTMAYCAPLLDYLKRQEIETPEKWESIKDKAIIRSVILVPTLELVDQIYTTLTCIPDTLGIHVHKWTTGVDYQQLLENLKSRTDILITTPSKLLSLQRVRMISRADLILKRIEFVVLDEADTLLDKSWLEDTHKALKAMSDVNHLVLCSATIPNEFDRTMTKMFPNAIPLTTPRLHKLPKGINFRIINAAVSPYKGSKIKALAQTLYAIAYDGTDPGFEKRCIVFINEKKNVDNVVQKLRNEYGHDVVGLTGDMEGRTRLELIRPFISPPEKLTEQEKQIDKDLNDQETVNISGSNISIGNIENSNKASNFIPKLRVLVTTDLLARGLNFKGVRNVILYDVPITAIDLVHRAGRTARMRQSGRVFMIIDKKTQSWAKAVPTILKKNKALT

Annotated regions:
phrase: EEIHPSPIQTIAIKRLSKNLMEPKLQVHAIAAETGSGKTMAYCAPLLDYLKRQEIETPEKWESIKDKAIIRSVILVPTLELVDQIYTTLTCIPDTLGIHVHKWTTGVDYQQLLENLKSRTDILITTPSKLLSLQRVRMISRADLILKRIEFVVLDEADTLLDKSWLEDTHKALKAMSDVNHLVLCSATIPNEFDRTMTKMFPNAIPLTTPRLHKLPKGINF
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: ALAQTLYAIAYDGTDPGFEKRCIVFINEKKNVDNVVQKLRNEYGHDVVGLTGDMEGRTRLELIRPFISPPEKLTEQEKQIDKDLNDQETVNISGSNISIGNIENSNKASNFIPKLRVLVTTDLLARGLNFKGVRNVILYDVPITAIDLVHRAGRTARMRQSGRVFMIIDKKTQSWAKAVPTILKKNKAL
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: DNVVQKLRNEYGHDVVGLTGDMEGRTRLELIRPFISPPEKLTEQEKQIDKDLNDQETVNISGSNISIGNIENSNKASNFIPKLRVLVTTDLLARGLNFKGVRNVILYDVPITAIDLVHRAGRTARM
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: TVNISGSNISIGNIENSNKASNFIPKLRVLVTTDLLARGLNFKGVRNVILYDVPITAIDLVHRAGRTAR
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: NLMEPKLQVHAIAAETGSGKTMAYCAPLLDYLKRQEIETPEKWESIKDKAIIRSVILVPTLELVDQIYTTLTCIPDTLGIHVHKWTTGVDYQQLLENLKSRTDILITTPSKLLSLQRVRMISRADLILKRIEFVVLDEADTLLDKSWLEDTHKALKAMSDVNHLVLCSATIPNEFDRTMTKMFPNAIP
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: SPIQTIAIKRLSKNLMEPKLQVHAIAAETGSGKTMAYCAPLLDYLKRQEIETPEKWESIKDKAIIRSVILVPTLELVDQIYTTLTCIPDTLGIHVHKWTTGVDYQQLLENLKSRTDILITTPSKLLSLQRVRMISRADLILKRIEFVVLDEADTLLDKSWLEDTHKALKAMSDVNHLVLCSATIPNEF
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain
Protein sequence:
MIVEKPCRVVAVVSGGPDSTCYTALWLKRGCDVHALSFLYGQKAVVEVERAQLLLRRLDGIAAERGWGRVVEHRVVDLSSLGELWRGTQLTDPSVSVEQSYTPTVVVPIRNVVMAAVATAYAYTVGRNAGAKTYVILGSHYDDIKPREDTWEPLYPDCSPECVEAMQTAFRICHFRGERGVEIWTPSREGLRKSQLLKMCHQEVGDLIYDTWSCYKSGEAHCGSCESCKNRHAAFIEAGLPDCTAYLTPPGPGFEKRGQFYLHISCKKQ

Annotated regions:
Protein sequence:
MKDVLERFLGYIKVDTQSSEESDTVPTTKTQLEFAKKLGEELKAIGLKDVSVDESGYVMATLESNIDKKVPAIGFIAHMDTSPDLSGTNINPRIVEKYDGQDIVLNKEKNIVLKINEFPEILEYKGQDIVVTDGNTLLGADDKAGIAEIITAMEYLINHPEIKHGTIKVGFTPDEEVGKGADHFDVKKFGADLAYTLDGGGIGELECETFNAAKAKVIIEGRNVHPGSAKNKMTNAVLVANKFINTLPENEVPERTEGYEGFFHLLSVKSEVETAELNYIIRDFDRKKFEERKEQIKEVGKKINEEYNKEIVCVKVEDQYYNMKEKIDEVKYVVDIAYDAMKAIDIEPILVPIRGGTDGSRLSFMGLPTPNLFAGGHNFHGRFEFVPVLSMEKAAELVVKIAELYANR

Annotated regions:
phrase: GADDKAGIAEIITAMEYLINHPEIKHGTIKVGFTPDEEV
type: CONSERVED_SITE
name: ArgE/DapE_CS
description: ArgE/DapE/ACY1/CPG2/YscS, conserved site

phrase: IGFIAHMDT
type: CONSERVED_SITE
name: ArgE/DapE_CS
description: ArgE/DapE/ACY1/CPG2/YscS, conserved site

phrase: ETFNAAKAKVIIEGRNVHPGSAKNKMTNAVLVANKFINTLPENEVPERTEGYEGFFHLLSVKSEVETAELNYIIRDFDRKKFEERKEQIKEVGKKINEEY
type: DOMAIN
name: Peptidase_M20_dimer
description: Peptidase M20, dimerisation domain
Protein sequence:
MNNRIPEDLIERAYQGKSTKEDGLLLLEVPPFELFRFADELRSLTAGDTVTYVVNRNINFTSRCVGTCGFCAFRTNDGKVLSIEEIMEKVREAEKAKATEVCIQGGLLPDVGLDFYQEIAESIKAEFPEMHIHAFSPMEVYHASHISGIKVSEALSKLKRSGLDTMPGTAAEILSDRVRKIICPSKLRTAEWIEVVTQAHAAGIPTTATMMYGHVETPEERIEHILTIREIQKETGGITEFVPLPFMPYNNPVGEKIIREGRYATPGLDDLKIYAISRILLHGHVDNIQASWVKLGKKLSQFALQCGANDLGGTLMEESISRLAGAPNGESISVEELEWMIYGAGRVPKERTTLYKGVRELASRNPGRITGCGASE

Annotated regions:
phrase: VTYVVNRNINFTSRCVGTCGFCAFRTNDGKVLSIEEIMEKVREAEKAKATEVCIQGGLLPDVGLDFYQEIAESIKAEFPEMHIHAFSPMEVYHASHISGIKVSEALSKLKRSGLDTMPGTAAEILSDRVRKIICPSKLRTAEWIEVVTQAHAAGIPTTATMMYGHVETPEERIEHILTIREIQKETGGITEFVPLPFMPYNNPVGEKIIREGRYATPGLDDLKIYAISRILLHG
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LIERAYQGKSTKEDGLLLLEVPPFELFRFADELRSLTAGDTVTYVVNRNINFTSRCVGTCGFCAFRTNDGKVLSIEEIMEKVREAEKAKATEVCIQGGLLPDVGLDFYQEIAESIKAEFPEMHIHAFSPMEVYHASHISGIKVSEALSKLKRSGLDTMPGTAAEILSDRVRKIICPSKLRTAEWIEVVTQAHAAGIPTTATMMYGHVETPEERIEHILTIREIQKETGGITEFVPLPFMPYNNPVGEKIIREGRYATPGLDDLKIYAISRILLHGHVDNIQASWVKLGKKLSQFALQCGANDLGGTLMEESISRLAGAPNGESISVEELEWMIYGAGRVPKERTTLYKGVR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: NNRIPEDLIERAYQGKSTKEDGLLLLEVPPFELFRFADELRSLTAGDTVTYVVNRNINFTSRCVGTCGFCAFRTNDGKVLSIEEIMEKVREAEKAKATEVCIQGGLLPDVGLDFYQEIAESIKAEFPEMHIHAFSPMEVYHASHISGIKVSEALSKLKRSGLDTMPGTAAEILSDRVRKIICPSKLRTAEWIEVVTQAHAAGIPTTATMMYGHVETPEERIEHILTIREIQKETGGITEFVPLPFMPYNNPVGEKIIREGRYATPGLDDLKIYAISRILLHGHVDNIQASWVKLGKKLSQFALQCGANDLGGTLMEESISRLAGAPNGESISVEELEWMIYGAGRVPKERTTLYKG
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: GITEFVPLPFMPYNNPVGEKIIREGRYATPGLDDLKIYAISRILLHGHVDNIQASWVKLGKKLSQFALQCGANDLGGTLMEESISRLAGAPNGESISVEELEWMIYGAGRVPKERTTLY
type: DOMAIN
name: CofH/MnqC-like_C
description: CofH/MqnC-like, C-terminal domain

phrase: VNRNINFTSRCVGTCGFCAFRTNDGKVLSIEEIMEKVREAEKAKATEVCIQGGLLPDVGLDFYQEIAESIKAEFPEMHIHAFSPMEVYHASHISGIKVSEALSKLKRSGLDTMPGTAAEILSDRVRKIICPSKLRTAEWIEVVTQAHAAGIPTTATMMYGHVETPEERIEHILTIREIQKETGGITEFVPLPFMPYNNPVGEKIIREGR
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: INFTSRCVGTCGFCAFRTNDGKVLSIEEIMEKVREAEKAKATEVCIQGGLLPDVGLDFYQEIAESIKAEFPEMHIHAFSPMEVYHASHISGIKVSEALSKLKRSGLDTMPGTAAEILSDRVRKIICPSKLRTAEWIEVVTQAHAAGIPTTATMMYGHVETPEERIEH
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MAKVLVIKTSMMGANSISNVLNDKFMEYYKEKNPNDEFIYMNLNDEKMASITMTSHNMKEYFVAEYSDKYINQLKKVDKVVMSVPMTNFNVNAVTKNYLDHISVADKTFSYKYSKKGEAIGLLDHLSVQILTTQGAPLGWYPWGNHSEYLKGHWRFLGAKVADHILVDSVKIGENSKKTPQEIIEKFDGEIKKAAYSF

Annotated regions:
phrase: KVLVIKTSMMGANSISNVLNDKFMEYYKEKNPNDEFIYMNLNDEKMASITMTSHNMKEYFVAEYSDKYINQLKKVDKVVMSVPMTNFNVNAVTKNYLDHISVADKTFSYKYSKKGEAIGLLDHLSVQILTTQGAPLGWYPWGNHSEYLKGHWRFLGAKVADHILVDSVKIGENSKKTPQEIIEK
type: DOMAIN
name: Flavodoxin_fold
description: Flavodoxin-like fold