nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MENLDALVSQALEAVERAEDINALEQIRVNYLGKKGELTQVMKTLGNLPAEERPKVGALINDAKERVTVVLNARKAAFEEAELSARLAAECIDVTLPGRGQATGGLHPITRTLERIEQFFTHIGYGIAEGPEVEDDYHNFEALNIPGHHPARAMHDTFYFNANMLLRTHTSPVQVRTMESTQPPIRIVCPGRVYRCDSDITHSPMFHQVEGLLIDRDINFADLKGTIEEFLRVFFEKELAVRFRPSFFPFTEPSAEVDIQCVMCSGNGCRVCKQTGWLEVMGCGMVHPNVLRMSGIDPEEFQGFAFGMGAERLAMLRYGVNDLRLFFDNDLRFLAQFR

Annotated regions:
phrase: IEQFFTHIGYGIAEGPEVEDDYHNFEALNIPGHHPARAMHDTFYFNANMLLRTHTSPVQVRTMESTQPPIRIVCPGRVYRCDSDITHSPMFHQVEGLLIDRDINFADLKGTIEEFLRVFFEKELAVRFRPSFFPFTEPSAEVDIQCVMCSGNGCRVCKQTGWLEVMGCGMVHPNVLRMSGIDPEEFQGFAFGMGAERLAMLRYGVNDLRLFFDNDLRFLA
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: IDVTLPGRGQATGGLHPITRTLERIEQFFTHIGYGIAEGPEVEDDYHNFEALNIPGHHPARAMHDTFYFNANMLLRTHTSPVQVRTMESTQPPIRIVCPGRVYRCDSDITHSPMFHQVEGLLIDRDINFADLKGTIEEFLRVFFEKELAVRFRPSFFPFTEPSAEVDIQCVMCSGNGCRVCKQTGWLEVMGCGMVHPNVLRMSGIDPEEFQGFAFGMGAERLAMLRYGVNDLRLFFDNDLRFLAQ
type: DOMAIN
name: Phenylalanyl-tRNA_Synthase
description: Phenylalanyl-tRNA synthetase

phrase: DINALEQIRVNYLGKKGELTQVMKTLGNLPAEERPKVGALINDAKERVTVVLNARKAAFEEAELSAR
type: DOMAIN
name: Phe-tRNA_ligase_II_N
description: Phenylalanine-tRNA ligase, class II, N-terminal
Protein sequence:
MIQVESRLTVCDNSGAKEALCIRVLGGTKRRYASVGDVIVVSIKSVIPSSDVKKGAVSKALIVRTKKEIRRADGSYIRFDDNACVLLNNAGEIRGSRIFGPVARELRAANMKVVSLAPEVL

Annotated regions:
phrase: ALIVRTKKEIRRADGSYIRFDDNACV
type: CONSERVED_SITE
name: Ribosomal_uL14_CS
description: Large ribosomal subunit protein uL14, conserved site
Protein sequence:
MSLRPNAKTEVRRNRYKVAVDAEEGRRRREDNMVEIRKSKREESLMKKRREGMQALQGFPSASAASVDKKLDSLKDMVAGVWSDDPALQLESTTQFRKLLSIERSPPIEEVISAGVVPRFVEFLKKEDYPAIQFEAAWALTNIASGTSDHTKVVIDHNAVPIFVQLLASPSDDVREQAVWALGNVAGDSPRCRDLVLGCGALLPLLNQLNEHAKLSMLRNATWTLSNFCRGKPQPHFDQVKPALPALERLIHSDDEEVLTDACWALSYLSDGTNDKIQTVIQAGVVPKLVELLLHHSPSVLIPALRTVGNIVTGDDIQTQCVINSGALPCLANLLTQNHKKSIKKEACWTISNITAGNKDQIQTVVEANLISPLVSLLQNAEFDIKKEAAWAISNATSGGSHDQIKYLVEQGCIKPLCDLLVCPDPRIITVCLEGLENILKVGEAEKNLGHTGDMNYYAQLIDDAEGLEKIENLQSHDNNEIYEKAVKILETYWLEEEDDETQQPPGVDGSQAGFQFGGNQAPVPSGGFNFS

Annotated regions:
phrase: NKDQIQTVVEANLISPLVSLLQNAEFDIKKEAAWAISNA
type: REPEAT
name: Armadillo
description: Armadillo

phrase: ALPALERLIHSDDEEVLTDACWALSYLS
type: REPEAT
name: Armadillo
description: Armadillo

phrase: QTQCVINSGALPCLANLLTQNHKKSIKKEACWTISNIT
type: REPEAT
name: Armadillo
description: Armadillo

phrase: SPPIEEVISAGVVPRFVEFLKKEDYPAIQFEAAWALTNIA
type: REPEAT
name: Armadillo
description: Armadillo

phrase: SHDQIKYLVEQGCIKPLCDLLVCPDPRIITVCLEGLENI
type: REPEAT
name: Armadillo
description: Armadillo

phrase: NDKIQTVIQAGVVPKLVELLLHHSPSVLIPALRTVGNI
type: REPEAT
name: Armadillo
description: Armadillo

phrase: SDHTKVVIDHNAVPIFVQLLASPSDDVREQAVWALGNV
type: REPEAT
name: Armadillo
description: Armadillo

phrase: SPRCRDLVLGCGALLPLLNQLNEHAKLSMLRNATWTLSNFC
type: REPEAT
name: Armadillo
description: Armadillo

phrase: NKDQIQTVVEANLISPLVSLLQNAEFDIKKEAAWAISNAT
type: REPEAT
name: Armadillo
description: Armadillo

phrase: RSPPIEEVISAGVVPRFVEFLKKEDYPAIQFEAAWALTNIA
type: REPEAT
name: Armadillo
description: Armadillo

phrase: SHDQIKYLVEQGCIKPLCDLLVCPDPRIITVCLEGLENIL
type: REPEAT
name: Armadillo
description: Armadillo

phrase: KPQPHFDQVKPALPALERLIHSDDEEVLTDACWALSYLS
type: REPEAT
name: Armadillo
description: Armadillo

phrase: TSDHTKVVIDHNAVPIFVQLLASPSDDVREQAVWALGNVA
type: REPEAT
name: Armadillo
description: Armadillo

phrase: DSPRCRDLVLGCGALLPLLNQLNEHAKLSMLRNATWTLSNFC
type: REPEAT
name: Armadillo
description: Armadillo

phrase: TNDKIQTVIQAGVVPKLVELLLHHSPSVLIPALRTVGNIV
type: REPEAT
name: Armadillo
description: Armadillo

phrase: DDIQTQCVINSGALPCLANLLTQNHKKSIKKEACWTISNIT
type: REPEAT
name: Armadillo
description: Armadillo

phrase: MSLRPNAKTEVRRNRYKVAVDAEEGRRRREDNMVEIRKSKREESLMKKRREGMQALQ
type: DOMAIN
name: Importin-a_IBB
description: Importin-alpha, importin-beta-binding domain

phrase: PALPALERLIHSDDEEVLTDACWALSYLSDGTNDKIQTVIQA
type: REPEAT
name: Armadillo
description: Armadillo

phrase: GALPCLANLLTQNHKKSIKKEACWTISNITAGNKD
type: REPEAT
name: Armadillo
description: Armadillo

phrase: NYYAQLIDDAEGLEKIENLQSHDNNEIYEKAVKILETYWLEEEDDETQQ
type: REPEAT
name: Arm_3
description: Atypical Arm repeat

phrase: GVVPRFVEFLKKEDYPAIQFEAAWALTNIASGTSDHTKV
type: REPEAT
name: Armadillo
description: Armadillo

phrase: NAVPIFVQLLASPSDDVREQAVWALGNV
type: REPEAT
name: Armadillo
description: Armadillo

phrase: RRNRYKVAVDAEEGRRRREDNMVEIRKSKREESLMKKRREGMQALQGFPSASAASVDKKLDSLKDMVAGVWSDDPALQLEST
type: DOMAIN
name: Importin-a_IBB
description: Importin-alpha, importin-beta-binding domain
Protein sequence:
MSDKQKTLAKEAELKGVGLHTGKEVRMTLKPAAENTGLVFVRTDLEGHPRVEADVNFVTTTERGTTLEKNGVRIQTCEHLLAALVGCDVDNAIIEMDSAEPPILDGSSKFFVEAIENAGVIEQDAEREYFVVKEVMQYINPESGSELTIIPSEKYEVTTMVDFGTKVLGTQNATLKDISEFKTEIASARTFSFLHEIEMLLDAGLIKGGDLTNAIVYVDKELTDETAQKLKKAFNKEDVSIHPNGVLDNLTLKYPNEAARHKLLDVVGDLALAGVKLKGRVIANKPGHFVNTQFAKLLNRQWKQEKKKSVPQFDLSAEPLYDIKGVMRMLPHRPPFLLIDKILELTETMAVGVKNVTMNEPFFVGHFPEEPVMPGVLLIEAMAQTGGIFVLAGVPDPENYSTYFMKMDNVKFKKKVVPGDTVVFRIELLEPIRRGIVQMHGEGFVGENLVVEADLMAQVIKNKNIE

Annotated regions:
Protein sequence:
MLNIVIFGAPGSGKGTQSERIVEKFGINHISTGDVLRAEIKKGTELGKTAKGYIDQGQLLPDELIIDILASTLDSFKESKGVIFDGFPRTIAQAEALKKMLAERGQEVSVMLDLDVPEEELMTRLIKRGQESGRADDNEETIKKRLVVYHSQTAPLIDWYKNEGKYQHIHGLGTMDAIFADIVAAVEKL

Annotated regions:
phrase: VIFDGFPRTIA
type: CONSERVED_SITE
name: Adenylat_kinase_CS
description: Adenylate kinase, conserved site
Protein sequence:
MAALRKSCSALLNSLPKRYGRVAKSTAAQFQDESAAPVRKEIGEVNNMMEIGTRRIFAEEHDMFRQTARRFFQEEILPYHSEWEKNKEISREAWESAGTTGLLGVNTAEEHGGIGGDFLSAAIVWEEQSYVNCSGPGFSLHSDIVMPYITRYGTKAQIDKFIPMLTAGKWIGAIAMTEPGAGSDLQGVKTNAKRDGDDWILNGSKVFITNGYLADVVIVVAVTNPEAKSKAHGISLFLVEAGMPGFKKGKKLEKMGYKAQDTAELFFEDVRIPKENLLGEANKGFYYLMQELPQERLLIADMGIALCEWMFEETRAYVRQRKAFGKTISSLQTIQHKLAEMKTEICVGRSFMDQCLEIHQNRGCDSFSASMAKYWLTDLQCSVADRCVQMHGGWGYMWEYPIARAFVDSRVQPIYGGTNEIMKELIARSIVSDI

Annotated regions:
phrase: AMTEPGAGSDLQ
type: CONSERVED_SITE
name: Acyl-CoA_DH_CS
description: Acyl-CoA dehydrogenase, conserved site

phrase: EEHDMFRQTARRFFQEEILPYHSEWEKNKEISREAWESAGTTGLLGVNTAEEHGGIGGDFLSAAIVWEEQSYVNCSGPGFSLHSDIVMPYITRYGTKAQIDKFIPMLTAG
type: DOMAIN
name: AcylCoA_DH/ox_N
description: Acyl-CoA dehydrogenase/oxidase, N-terminal

phrase: NKGFYYLMQELPQERLLIADMGIALCEWMFEETRAYVRQRKAFGKTISSLQTIQHKLAEMKTEICVGRSFMDQCLEIHQNRGCDSFSASMAKYWLTDLQCSVADRCVQMHGGWGYMWEYPIARAFVDSRVQPIYGGTNEIMKELIARS
type: DOMAIN
name: AcylCo_DH/oxidase_C
description: Acyl-CoA dehydrogenase/oxidase, C-terminal

phrase: AIAMTEPGAGSDLQGVKTNAKRDGDDWILNGSKVFITNGYLADVVIVVAVTNPEAKSKAHGISLFLVEAGMPGFKKGKKLEKMGYKAQDTAELFFED
type: DOMAIN
name: Acyl-CoA_Oxase/DH_mid-dom
description: Acyl-CoA oxidase/dehydrogenase, middle domain

phrase: QMHGGWGYMWEYPIARAFV
type: CONSERVED_SITE
name: Acyl-CoA_DH_CS
description: Acyl-CoA dehydrogenase, conserved site
Protein sequence:
MAVSYDLRPIGTCPVRESDNIIVKERSKLSLIGLSQDEMAEALKAIGIPERQTRMRVRQLWHWLYVRGVSNFDEMLNISKPMQEIFKKHFSIARPEIAGEQISKDGTRKWLLRFPPRGAGRPVEIETVYIPEEGRGTLCLSSQVGCTLTCSFCYTGTQVLVRNLTAEEILAQLLVARDCLGDFPDRNTPDGAIVPVEGRKITNIVMMGMGEPLYNFEAVKKALLIASDGNGLSLSKRRITLSTSGVVPGMIRTGEEIGVMLAISLHAVNDTLRDMLVPINKKYPLALLMDACRQYPGLSNAKRITFEYVMLKDVNDSLDDAKRLVQLLKGIPAKINLIPFNPWPGSNYQCSDWEQIERFADVVNQAGYASPIRIPRGRDILAACGQLKSASERLRKSERLHLEHIVNS

Annotated regions:
phrase: LIGLSQDEMAEALKAIGIPERQTRMRVRQLWHWLYVRGVSNFDEMLNISKPMQEIFKKHFS
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: ERSKLSLIGLSQDEMAEALKAIGIPERQTRMRVRQLWHWLYVRGVSNFDEMLNISKPMQEIFKKHFSIARPEIAGEQISKDGTRKWLLRFPPRGAGRPVEIETVYIPEEGRGTLCLSSQVGCTLTCSFCYTGTQVLVRNLTAEEILAQLLVARDCLGDFPDRNTPDGAIVPVEGRKITNIVMMGMGEPLYNFEAVKKALLIASDGNGLSLSKRRITLSTSGVVPGMIRTGEEIGVMLAISLHAVNDTLRDMLVPINKKYPLALLMDACRQYPGLSNAKRITFEYVMLKDVNDSLDDAKRLVQLLKGIPAKINLIPFNPWPGSNYQCSDWEQIERFADVVNQAGYASPIRIPRGRDILAACGQLKSASERLRKS
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TNIVMMGMGEPLYNFEAVKKALLIASDGNGLSLSKRRITLSTSGVVPGMIRTGEEIGVMLAISLHAVNDTLRDMLVPINKKYPLALLMDACRQYPGLSNAKRITFEYVMLKDVNDSLD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: EEGRGTLCLSSQVGCTLTCSFCYTGTQVLVRNLTAEEILAQLLVARDCLGDFPDRNTPDGAIVPVEGRKITNIVMMGMGEPLYNFEAVKKALLIASDGNGLSLSKRRITLSTSGVVPGMIRTGEEIGVMLAISLHAVNDTLRDMLVPINKKYPLALLMDACRQYPGLSNAKRITFEYVMLKDVNDSLDDAKRLVQLLKGIPAKINLIPFNPWPGSNYQCSDWEQIERFADVVNQAGYASPI
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MDTVKIDTRDVNFWYGDFHALKGISMQIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGHNIYAKGVEVDELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVKDKLKESAYALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYLGEMVEYDDTKKIFTNPEKEATQNYITGRFG

Annotated regions:
phrase: IDTRDVNFWYGDFHALKGISMQIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGHNIYAKGVEVDELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVKDKLKESAYALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYLGEMVEYDDTKKIFTNPEKEATQNY
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: EKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGHNIYAKGVEVDELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVKDKLKESAYALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYLG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LKGISMQIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGHNIYAKGVEVDELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVKDKLKESAYALSGGQQQRLCIARAMAVSPSVLLMDEP
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: LSGGQQQRLCIARA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site
Protein sequence:
MTDKDFKSGFAVMAGLPNAGKSTLLNAVAGGLLSAVSPKPQMTRQNIIALSEGEKHQIIFVDTPGFLEAKYKLQEIMKGSLSQALEEDADVAVFVFDPLQEYSAHKKLISKLQNIKCPLFVLINKADTQPVEKLRKIEEQLKKDLPDIEKTFFISAKQNKGVAEFKTAVAETLPFNPPYFPQGQWTDRWERFYVAEFIREQIFNLYEKEVPYCTYVEVETFTEDLGPKNYIKAKIYVERESQKPIIIGSKGSSIAKLRVSAQKRIEEFLGRKYRLELEVSVEPQWRSSKKCLQKFGFITE

Annotated regions:
phrase: VMAGLPNAGKSTLLNAVAGGLLSAVSPKPQMTRQNIIALSEGEKHQIIFVDTPGFLEAKYKLQEIMKGSLSQALEEDADVAVFVFDPLQEYSAHKKLISKLQNIKCPLFVLINKADTQPVEKLRKIEEQLKKDLPDIEKTFFISAKQNKGV
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: FKSGFAVMAGLPNAGKSTLLNAVAGGLLSAVSPKPQMTRQNIIALSEGEKHQIIFVDTPGFLEAKYKLQEIMKGSLSQALEEDADVAVFVFDPLQEYSAHKKLISKLQNIKCPLFVLINKADTQPVEKLRKIEEQLKKDLPDIEKTFFISAKQNKGVAEFKTAVAET
type: DOMAIN
name: G_ERA_dom
description: Era-type guanine nucleotide-binding (G) domain

phrase: KSGFAVMAGLPNAGKSTLLNAVAGGLLSAVSPKPQMTRQNIIALSEGEKHQIIFVDTPGFLEAKYKLQEIMKGSLSQALEEDADVAVFVFDPLQEYSAHKKLISKLQNIKCPLFVLINKADTQPVEKLRKIEEQLKKDLPDIEKTFFISAKQNKGVAEFKTAVAETLP
type: DOMAIN
name: G_ERA_dom
description: Era-type guanine nucleotide-binding (G) domain

phrase: YCTYVEVETFTEDLGPKNYIKAKIYVERESQKPIIIGSKGSSIAKLRVSAQKRIEEFLGRKYRLELEVSVEPQW
type: DOMAIN
name: KH_dom_type_2
description: K Homology domain, type 2

phrase: IREQIFNLYEKEVPYCTYVEVETFTEDLGPKNYIKAKIYVERESQKPIIIGSKGSSIAKLRVSAQKRIEEFLGRKYRLELEVSVE
type: DOMAIN
name: KH_dom_type_2
description: K Homology domain, type 2

phrase: AVMAGLPNAGKSTLLNAVAG
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: FVDTPGFLEAKYKLQ
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: VMAGLPNAGKSTLLNAVAGGLLSAVSPKPQMTRQNIIALSEGEKHQIIFVDTPGFLEAKYKLQEIMKGSLSQALEEDADVAVFVFDPLQEYSAHKKLISKLQNIKCPLFVLIN
type: DOMAIN
name: GTP-bd
description: GTP binding domain
Protein sequence:
MIEDQALFGYARYGKVDDVVYPSVIASGNGINYGDSDIEILGDRIPRQILYPAKIKQEILETDKLVIIPNGAELVRKPKDLVRIIMDIHSRYGFSKLIMISGISDPYSIPALVYLGISFFDSSILEMEGKMGYRFTPFGIEKADHDVSSENAIFISDMMHIIQRSISDGTLRELIEKAVISSKAAEMVRIADYSYYQDFESVFPVRTPYIKANTIEDLYRPDLIRYRNYISESYVKPDADIALILPCSAKKPYSRSKSHQKVIGALGNLRRFIHEVIVTSPIGIVPRDLEETYPARFYDIPVIGLWYEDEKIMMKRMMSSYMGRNRYRKVIAFIPEDLDFITEAIPYPHEVIEFKSSNLQRLREVIQREIAGGKAVNQKVAKYNSILRYQFGEWILPLVSGYTIRRNYNQDMIVKDGKILFVYNENLGKFTINKASADMFIKNGKFLVEIDDFKPTSNVYAMGVVDATEDIRQEDEVVLVHSGEVRGVGIAKMPARAMIELKKGIAVKVR

Annotated regions:
phrase: SNVYAMGVVDATEDIRQEDEVVLVHSGEVRGVGIAKMPARAMIELKKGIAVKV
type: DOMAIN
name: PUA
description: PUA domain

phrase: RYRNYISESYVKPDADIALILPCSAKKPYSRSKSHQKVIGALGNLRRFIHEVIVTSPIGIVPRDLEETYPARFYDIPVIGLWYEDEKIMMKRMMSSYMGRNRYRKVIAFIPEDLDFITE
type: DOMAIN
name: DUF5591
description: Domain of unknown function DUF5591
Protein sequence:
MDGMYNFHSAGDYSDKSVLMMSPESLMFPSDYQALLCSSAGENRVSDVFGSDELLSVAVSALSSEAASIAPEIRRNDDNVSLTVIKAKIACHPSYPRLLQAYIDCQKVGAPPEIACLLEEIQRESDVYKQEVVPSSCFGADPELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQLRNLCTGVESARGVSEDGVISSDEELSGGDHEVAEDGRQRCEDRDLKDRLLRKFGSRISTLKLEFSKKKKKGKLPREARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFINQRKRHWKPSENMPFAMMDDSSGSFFTEE

Annotated regions:
phrase: DLKDRLLRKFGSRISTLKLE
type: DOMAIN
name: ELK_dom
description: ELK domain

phrase: DLKDRLLRKFGSRISTLKLEF
type: DOMAIN
name: ELK_dom
description: ELK domain

phrase: LPREARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFINQRKRHWKP
type: DOMAIN
name: HD
description: Homeodomain

phrase: KKKKKGKLPREARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFINQRKRHWKPSEN
type: DOMAIN
name: HD
description: Homeodomain

phrase: TVIKAKIACHPSYPRLLQAYIDCQKVGAPPEIACLLEEIQRESD
type: DOMAIN
name: KNOX1
description: KNOX1

phrase: FGADPELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQLRNL
type: DOMAIN
name: KNOX2
description: KNOX2

phrase: LADATGLDQKQINNWFINQRKRH
type: CONSERVED_SITE
name: Homeobox_CS
description: Homeobox, conserved site

phrase: IKAKIACHPSYPRLLQAYIDCQKVGAPPEIACLLEEIQRES
type: DOMAIN
name: KNOX1
description: KNOX1

phrase: PSSCFGADPELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQLRNLC
type: DOMAIN
name: KNOX2
description: KNOX2

phrase: DLKDRLLRKFGSRISTLKLEF
type: DOMAIN
name: ELK_dom
description: ELK domain

phrase: FSKKKKKGKLPREARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWFINQRKRHWK
type: DOMAIN
name: HD
description: Homeodomain

phrase: WWNLHYKWPYPTEGDKIALADATGLDQKQINNWFINQRK
type: DOMAIN
name: KN_HD
description: KN homeodomain
Protein sequence:
MSTKIDGKQIAAEIKTNLAERVNKLKAQGIQPGLGTLLVGEDPGSMKYVAGKHADCQEVGITSVKKELPADASFDDIAAAVRELNEDPACTGFIVQLPLPKGINENAIIDMIDPAKDADGMHPYNLGELVLHVRGDISTPLPCTPRGVLELLDAYDIDLNGKEVCVLGRGITIGRTIGLMLTRNAVNATVTLCHTGTRDVADHMRRADVIVAAMGSAGFVTPDKIKDGAVLVDVGVSRVYDEEAGRYRIKGDVDKACYDKASAYTPNPGGVGPMTRAMLLANVVEMAERHA

Annotated regions:
phrase: HPYNLGELVLHVRGDISTPLPCTPRGVLELLDAYDIDLNGKEVCVLGRGITIGRTIGLMLTRNAVNATVTLCHTGTRDVADHMRRADVIVAAMGSAGFVTPDKIKDGAVLVDVGVSRVYDEEAGRYRIKGDVDKACYDKASAYTPNPGGVGPMTRAMLLANVVEMAER
type: DOMAIN
name: THF_DH/CycHdrlase_NAD-bd_dom
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain

phrase: PAKDADGMHPYNLGELVLHVRGDISTPLPCTPRGVLELLDAYDIDLNGKEVCVLGRGITIGRTIGLMLTRNAVNATVTLCHTGTRDVADHMRRADVIVAAMGSAGFVTPDKIKDGAVLVDVGVSRVYDEEAGRYRIKGDVDKACYDKASAYTPNPGGVGPMTRAMLLANVVEMA
type: DOMAIN
name: THF_DH/CycHdrlase_NAD-bd_dom
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain

phrase: IDGKQIAAEIKTNLAERVNKLKAQGIQPGLGTLLVGEDPGSMKYVAGKHADCQEVGITSVKKELPADASFDDIAAAVRELNEDPACTGFIVQLPLPKGINENAIIDMIDPAKDA
type: DOMAIN
name: THF_DH/CycHdrlase_cat_dom
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
Protein sequence:
MVRPRRVFAQHWLKSEKALDAIVKAAECSTNDRILEIGPGTGILTRRLLPLVEALLAVEIDRDLCKLLVKQLGQKENFLLLQGDFLTLDLVANLLTFPKFQKPNKVVANIPYNITGPIIEKLLGTIANPNPEPFDSIVLLIQKEVAERLYAKAGSRTFGALSVRVQYLADCEFICDVPAGAFHPPPKVDSAVVRLRPRQIQIPARDPKRLENLVKLGFGAKRKMLRNNLQSVVDRDRLSQLLEQLNINPQARAEDISTQQWVELANLLGVE

Annotated regions:
phrase: ALDAIVKAAECSTNDRILEIGPGTGILTRRLLPLVEALLAVEIDRDLCKLLVKQLGQKENFLLLQGDFLTLDLVANLLTFPKFQKPNKVVANIPYNITGPIIEKLLGTIANPNPEPFDSIVLLIQKEVAERLYAKAGSRTFGALSVRVQYLADCEFICDVPAGAFHPPPKVDSAVVRLRPR
type: DOMAIN
name: rRNA_Ade_methylase_Trfase_N
description: Ribosomal RNA adenine methylase transferase, N-terminal

phrase: ILEIGPGTGILTRRLLPLVEALLAVEI
type: CONSERVED_SITE
name: rRNA_Ade_Mease_Trfase_CS
description: Ribosomal RNA adenine methylase transferase, conserved site
Protein sequence:
MSAHSHEIEEGLSFQPRFDASGLVTCVATDVATGDVLMVAHMNDEALRKTIATGEAWYFSRSRNALWRKGETSGQTQRVVEMRTDCDQDAVWIRVEQIGAACHTGRRSCFYRKVEAEDGGAKLVFVDADRLFDPDAVYKK

Annotated regions:
phrase: MVAHMNDEALRKTIATGEAWYFSRSRNALWRKGETSGQTQRVVEMRTDCDQDAVWIRVEQIGAACHTGRRSCF
type: DOMAIN
name: PRib_AMP_CycHydrolase_dom
description: Phosphoribosyl-AMP cyclohydrolase domain
Protein sequence:
MAERFVVTGGNRLSGEVAVGGAKNSVLKLMAATLLAEGTSTITNCPDILDVPLMAEVLRGLGATVELDGDVARITAPDEPKYDADFAAVRQFRASVCVLGPLVGRCKRARVALPGGDAIGSRPLDMHQAGLRQLGAHCNIEHGCVVARAETLRGAEIQLEFPSVGATENILMAAVVAEGVTTIHNAAREPDVVDLCTMLNQMGAQVEGAGSPTMTITGVPRLHPTEHRVIGDRIVAATWGIAAAMTRGDISVAGVDPAHLQLVLHKLHDAGATVTQTDASFRVTQYERPKAVNVATLPFPGFPTDLQPMAIALASIADGTSMITENVFEARFRFVEEMIRLGADARTDGHHAVVRGLPQLSSAPVWCSDIRAGAGLVLAGLVADGDTEVHDVFHIDRGYPLFVENLVSLGAEIERVCC

Annotated regions:
phrase: VTGGNRLSGEVAVGGAKNSVLKLMAATLLAEGTSTITNCPDILDVPLMAEVLRGLGATVELDGDVARITAPDEPKYDADFAAVRQFRASVCVLGPLVGRCKRARVALPGGDAIGSRPLDMHQAGLRQLGAHCNIEHGCVVARAETLRGAEIQLEFPSVGATENILMAAVVAEGVTTIHNAAREPDVVDLCTMLNQMGAQVEGAGSPTMTITGVPRLHPTEHRVIGDRIVAATWGIAAAMTRGDISVAGVDPAHLQLVLHKLHDAGATVTQTDASFRVTQYERPKAVNVATLPFPGFPTDLQPMAIALASIADGTSMITENVFEARFRFVEEMIRLGADARTDGHHAVVRGLPQLSSAPVWCSDIRAGAGLVLAGLVADGDTEVHDVFHIDRGYPLFVEN
type: DOMAIN
name: Enolpyruvate_Tfrase_dom
description: Enolpyruvate transferase domain
Protein sequence:
MSRRRRANKRVITPDSKYNSVLLARFINVIMRSGERSIAEKIVYGALSKAENRIGESAMSVFSSALNNVMPQMEVRSRRIGGVTYQVPVEVKEDRSVSLALRWISKAAATARKRSNKMYMDCLCNELLEAYNKRGGAYKIREEKYKMAEANKAFSHFRFN

Annotated regions:
phrase: SRRRRANKRVITPDSKYNSVLLARFINVIMRSGERSIAEKIVYGALSKAENRIGESAMSVFSSALNNVMPQMEVRSRRIGGVTYQVPVEVKEDRSVSLALRWISKAAATARKRSNKMYMDCLCNELLEAYNKRGGAYKIREEKYKMAEAN
type: DOMAIN
name: Ribosomal_uS7_dom
description: Small ribosomal subunit protein uS7 domain
Protein sequence:
MSAPRVSFVSLGCPKALVDSERIITGLRSEGYEISRKHDGADLVIVNTCGFLDSARDESLEAIGLALNENGKVIVTGCLGAEPDVIRERHPNVLAITGPQAYESVMNAVHEVAPPAHDPFVDLVPPQGVKLTPRHYAYLKISEGCSNRCSFCIIPALRGDLVSRPINEVLREAEKLVQAGVKEILVISQDTSAYGLDIKYQEAMWQDRTVRTKFLDLSRELGEMGVWVRMHYVYPYPHVDEVIPLMAEGKILPYLDIPFQHASPAVLKNMRRPAHQEKTSRRIQAWRETCPDLAVRSTFIVGYPGETEEDFQMLLDWLDEAKIERAGCFKYEAVKGAKANDLGLEQVPEEVKEARWHRFMAKQQQISTNLLKKKVGKRLPVIIDEANGTIGKGRTRYDAPEIDGSVHISSRRPLRVGDIVTVKIEASDAYDLHGTAV

Annotated regions:
phrase: VGKRLPVIIDEANGTIGKGRTRYDAPEIDGSVHISSRRPLRVGDIVTVKIEASDAYDLHGTA
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: KKKVGKRLPVIIDEANGTIGKGRTRYDAPEIDGSVHISSRRPLRVGDIVTVKIEASDAYDLHGTA
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: KISEGCSNRCSFCIIPALRGDLVSRPINEVLREAEKLVQAGVKEILVISQDTSAYGLDIKYQEAMWQDRTVRTKFLDLSRELGEMGVWVRMHYVYPYPHVDEVIPLMAEGKILPYLDIPFQHASPAVLKNMRRPAHQEKTSRRIQAWRETCPDLAVRSTFIVGYPGETEEDFQMLLDW
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LKISEGCSNRCSFCIIPALR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: LTPRHYAYLKISEGCSNRCSFCIIPALRGDLVSRPINEVLREAEKLVQAGVKEILVISQDTSAYGLDIKYQEAMWQDRTVRTKFLDLSRELGEMGVWVRMHYVYPYPHVDEVIPLMAEGKILPYLDIPFQHASPAVLKNMRRPAHQEKTSRRIQAWRETCPDLAVRSTFIVGYPGETEEDFQMLLDWLDEAKIERAGCFKYEAVKGAKANDLGLEQVPEEVKEARWHRFMAKQQQIST
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: HYAYLKISEGCSNRCSFCIIPALRGDLVSRPINEVLREAEKLVQAGVKEILVISQDTSAYGLDIKYQEAMWQDRTVRTKFLDLSRELGEMGVWVRMHYVYPYPHVDEVIPLMAEGKILPYLDIPFQHASPAVLKNMRRPAHQEKTSRRIQAWRETCPDLAVRSTFIVGYPGETEEDFQMLLDWLDEAKIERAGCFKYEAVKGAKANDLGLEQVPEEVKEARWHRFM
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: RVSFVSLGCPKALVDSERIITGLRSEGYEISRKHDGADLVIVNTCGFLDSARDESLEAIGLALNENGKVIVTGCLGAEPDVIRERHPNVL
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: PRVSFVSLGCPKALVDSERIITGLRSEGYEISRKHDGADLVIVNTCGFLDSARDESLEAIGLALNENGKVIVTGCLGAEPDVIRERHPNVLAITGPQAYESVMNAVHEVA
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal
Protein sequence:
MSELANYGPGAIRAAYSGDYGFRTPPPDLPSLLLNERIVYLGTPINDVVAELLIAQLLYLESEDNAKPIEIYINSPGVAGFETSAFAVYDTMRHVRMPIKTICLGLAGGFSALLMAAGTKGQRMSLPNSRIILYQPYGGARGQATDINIRAQELLTTKRTLNQLLSIHTGKTVEQIDKDTERLFYMSPQEAVSYGLIDKVLEPSANKLAKLKAVGAPV

Annotated regions:
Protein sequence:
MINDIKKDADARMKKSVEALNANFHKIRTGRAHPSLLDAVTVEYYGSEMPLNQVASVNVEDARTLAVVPWEKSMVPKVEKAIMTSDLGLNPAAAGNVIRVPLPPLTEETRRNYIKQARGEAENARVAVRNVRRDANGDLKSLLKEKEITEDEERHAIDEIQKLTDKYVTEIDKLLETKEHDLLQV

Annotated regions:
phrase: NANFHKIRTGRAHPSLLDAVTVEYYGSEMPLNQVASVNVEDARTLAVVPWEKSMVPKVEKAIMTSDLGLNPAAAGNVIRVPLPPLTEETRRNYIKQARGEAENARVAVRNVRRDANGDLKSLLKEKEITEDEERHAIDEIQKLTDKYVTEIDKLLETKEHDL
type: DOMAIN
name: Ribosome_recyc_fac_dom
description: Ribosome recycling factor domain
Protein sequence:
MLFNEHQKKAISYISGPCLILAGAGSGKTRVIINKIVHLIKICHFDPKCITAITFTNKAACEMKSRILNVLSVNVSNLVKISTFHALGLEIIKSEIELLNIKSNFTIFDEQDQISILQEIVSKEDRSFVRQIRQSISNWKNKLLCPNQVNKISNSSIEFKFFRYYELYNAYLKSSNILDFDDLIFLPTILLRDNKLSRERWNDKIKYLLVDEYQDTNFIQYKLIKLLSSKRSNFTLVGDDDQSIYSWRGANIHNFESLKHDYPNLRTIIMQHNYRSSGRILKVANALISNNLHFFNKKLFSNLDYGSIVEIISAKNEEDEARVILQTLMLHKSNYNAQYKDYAILYRSNYQVKIFEKFLIKFKIPYKILANISFFSRPEIKDLIAYLRLIINPDDNAAFLRVVNRPLRGIGAVTLQKLKEWSKKRNQSFFMASLDIGLESILPVHNLKSLQEFVYLIQTISYQIQLNPIEVLEKLVATIKYEKWLMRSLKFSKLYVASIKNISIVLNWIINELKYKIMNSKKFVMKYLIDIISEFILQNSLNEDIVINNDYVQLMTLHASKGLEFLYVFIVGVEEGVLPYYRNTTMENNIDEERRLAYVGITRAQKKLFLSYAIQRCQYGVVINTKPSRFLRELPQSDILWQKSKILNLNEKNNFLFKAYKKSLKKKLLR

Annotated regions:
phrase: GRILKVANALISNNLHFFNKKLFSNLDYGSIVEIISAKNEEDEARVILQTLMLHKSNYNAQYKDYAILYRSNYQVKIFEKFLIKFKIPYKILANISFFSRPEIKDLIAYLRLIINPDDNAAFLRVVNRPLRGIGAVTLQKLKEWSKKRNQSFFMASLDIGLESILPVHNLKSLQEFVYLIQTISYQIQLNPIEVLEKLVATIKYEKWLMRSLKFSKLYVASIKNISIVLNWIINELKYKIMNSKKFVMKYLIDIISEFILQNSLNEDIVINNDYVQLMTLHASK
type: DOMAIN
name: DNA_helicase_UvrD-like_C
description: UvrD-like DNA helicase, C-terminal

phrase: IMQHNYRSSGRILKVANALISNNLHFFNKKLFSNLDYGSIVEIISAKNEEDEARVILQTLMLHKSNYNAQYKDYAILYRSNYQVKIFEKFLIKFKIPYKILANISFFSRPEIKDLIAYLRLIINPDDNAAFLRVVNRPLRGIGAVTLQKLKEWSKKRNQSFFMASLDIGLESILPVHNLKSLQEFVYLIQTISYQIQLNPIEVLEKLVATIKYEKWLMRSLKFSKLYVASIKNISIVLNWIINELKYKIMNSKKFVMKYLIDIISEFILQNSLNEDIVINNDYVQLMTLHASKGLEFLYVFIVGVEEGVLPYYRNTTMENNIDEERRLAYVGITRAQKKLFLSY
type: DOMAIN
name: DNA_helicase_UvrD-like_C
description: UvrD-like DNA helicase, C-terminal

phrase: MLFNEHQKKAISYISGPCLILAGAGSGKTRVIINKIVHLIKICHFDPKCITAITFTNKAACEMKSRILNVLSVNVSNLVKISTFHALGLEIIKSEIELLNIKSNFTIFDEQDQISILQEIVSKEDRSFVRQIRQSISNWKNKLLCPNQVNKISNSSIEFKFFRYYELYNAYLKSSNILDFDDLIFLPTILLRDNKLSRERWNDKIKYLLVDEYQDTNFIQYKLIKLLSSKRSNFTLVGDDDQSIYSWRGANIHNFESLKHDYPNLRTIIMQHNYRS
type: DOMAIN
name: UvrD-like_ATP-bd
description: UvrD-like helicase, ATP-binding domain

phrase: NEHQKKAISYISGPCLILAGAGSGKTRVIINKIVHLIKICHFDPKCITAITFTNKAACEMKSRILNVLSVNVSNLVKISTFHALGLEIIKSEIELLNIKSNFTIFDEQDQISILQEIVSKEDRSFVRQIRQSISNWKNKLLCPNQVNKISNSSIEFKFFRYYELYNAYLKSSNILDFDDLIFLPTILLRDNKLSRERWNDKIKYLLVDEYQDTNFIQYKLIKLLSSKRSNFTLVGDDDQSIYSWRGANIHNFESLKHDY
type: DOMAIN
name: UvrD-like_ATP-bd
description: UvrD-like helicase, ATP-binding domain