nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MXLKDLISKNKILSNLFKNIPDKTLNHNVNGISGNSKNIKNDYIFVAIKGAQFDGSDFINEARQNGAFLIIADKSEDKTVISTNKISTRLVYTELLASFYYKQPKEIIGVTGTNGKTSTVEFCRQLWAQAGWKAASMGTLGTNIENILNKNFLKSSKQSLTTFEPDELYKELYSLENQEISHLALEASSHGLDQFRLDSVKFTGAIFTNLSHDHFDYHDNIEDYFQCKKRLFTEIIQNNSAVAINIDDDFGKRLFNEINNKKHIIVTFGKSSDADVKINSIKQNNQNIDLVLQYKNQNYHSTIGMIGGFQSYNVVAATSICIALGIDANLIFKSISYLKPARGRMEMISATHNNSMIIIDYAHTPEALRHVLNSIKEIAKEKLITVFGCGGDRDTEKRKSMGEIAKEFSDLVIVTDDNPRTESPSKIRKDILQGCPNAEEIPDRNKAINYAISKLHKNDFLLIAGKGHETSQTIGIETLPFDDYTVAKETIKNIEKSRKAY

Annotated regions:
phrase: VTGTNGKTSTVEFCRQLWAQAGWKAASMGTLGTNIENILNKNFLKSSKQSLTTFEPDELYKELYSLENQEISHLALEASSHGLDQFRLDSVKFTGAIFTNLSHDHFDYHDNIEDYFQCKKRLFTEIIQNNSAVAINIDDDFGKRLFNEINNKKHIIVTFGKSSDADVKINSIKQNNQNIDLVLQYKNQNYHSTIGMIGGFQSYNVVAAT
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: VNGISGNSKNIKNDYIFVAIKGAQFDGSDFINEARQNGAFLIIADKSEDKTVISTNK
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: GRMEMISATHNNSMIIIDYAHTPEALRHVLNSIKEIAKEKLITVFGCGGDRDTEKRKSMGEIAKEFSDLVIVTDDNPRTESPSKIRKDILQGCPNAEEIPDRNKAINYAISKLHKNDFLLIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MLMPRRVKYRKQQRGRMKGKAKGGTLVQFGEWGLKALEPAWITAQQIEACRIAMMRVMKRAGKIWIRIFPDKPYTKKPAESRMGKGKGNVEGWVAVVKPGKILFEIAGVDEETAHEALRYAASKLPIATKVVPRHHIGGEAV

Annotated regions:
phrase: KRAGKIWIRIF
type: CONSERVED_SITE
name: Ribosomal_uL16_CS
description: Large ribosomal subunit protein uL16, conserved site

phrase: RMGKGKGNVEG
type: CONSERVED_SITE
name: Ribosomal_uL16_CS
description: Large ribosomal subunit protein uL16, conserved site

phrase: GTLVQFGEWGLKALEPAWITAQQIEACRIAMMRVMKRAGKIWIRIFPDKPYTKKPAESRMGKGKGNVEGWVAVVKPGKILFEIAGVDEETAHEALRYAASKLPIATKV
type: DOMAIN
name: Ribosomal_uL16_dom
description: Large ribosomal subunit protein uL16 domain
Protein sequence:
MNQVDYLRISLIDRCNFRCQYCMPEGVELDYILKQQLLTNEELLTLIREVFIPVGFNRFRLTGGEPLLRPRVVDLVSAIATLPQTQDLSMTTNGFLLAPMAQNLYNAGLRRINISLDSLDADTFDQIIGNQGRSRWQQVWHGIQAAHSVGFDPLKLNVVVIPGVNDHEILDLAALTIDKQWHVRFIEFMPIGNVDLFGDRGWVSSAELRQQIRDRWGLTESQVRGAGPADVFKIPGAKGTLGFISQMSECFCDRCNRMRLSADGWLRPCLLNETGQIDLKTALRSGTSTAQLQEQVRHLLRMKPEINFKGRDSGIVGTYTRTMSQIGG

Annotated regions:
phrase: ISLIDRCNFRCQYCMPEGVELDYILKQQLLTNEELLTLIREVFIPVGFNRFRLTGGEPLLRPRVVDLVSAIATLPQTQDLSMTTNGFLLAPMAQNLYNAGLRRINISLDSLDADTFDQIIGNQGRSRWQQVWHGIQAAHSVGFDPLKLNVVVIPGVNDHEILDLA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: MNQVDYLRISLIDRCNFRCQYCMPEGVELDYILKQQLLTNEELLTLIREVFIPVGFNRFRLTGGEPLLRPRVVDLVSAIATLPQTQDLSMTTNGFLLAPMAQNLYNAGLRRINISLDSLDADTFDQIIGNQGRSRWQQVWHGIQAAHSVGFDPLKLNVVVIPGVNDHEILDLAALTIDKQWHVRFIEFMPIGNVDLFGDRGWVSSAELRQQIRDRWGLTESQVRGAGP
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: DYLRISLIDRCNFRCQYCMPEGVELDYILKQQLLTNEELLTLIREVFIPVGFNRFRLTGGEPLLRPRVVDLVSAIATLPQTQDLSMTTNGFLLAPMAQNLYNAGLRRINISLDSLDADTFDQIIGNQGRSRWQQVWHGIQAAHSVGFDPLKLNVVVIPGVNDHEILDLAALTIDKQWHVRFIEFMPIGNVDLFGDRGWVSSAELRQ
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: HVRFIEFMPIGNVDLFGDRGWVSSAELRQQIRDRWGLTESQVRGAGPADVFKIPGAKGTLGFISQMSECFCDRCNRMRLSADGWLRPCLLNETGQIDLKTALRSGTSTAQLQEQVRHLLRMKP
type: DOMAIN
name: MoaA_twitch
description: Molybdenum cofactor biosynthesis protein A-like, twitch domain

phrase: MSECFCDRCNRMRLSADGWLRPCLLNETGQIDLKTALRSGTSTAQLQEQVRHLLRMKPEINFKGRDS
type: DOMAIN
name: MoaA_twitch
description: Molybdenum cofactor biosynthesis protein A-like, twitch domain

phrase: LIDRCNFRCQY
type: CONSERVED_SITE
name: MoaA_NifB_PqqE_Fe-S-bd_CS
description: MoaA/NifB/PqqE, iron-sulphur binding, conserved site
Protein sequence:
MAAAAMATVAVPRVKLGSQGMEVSAQGLGCMGMCPAFEPPKPEADMVALIRHAIAAGVTFFDTSDLYGPHTNEVLLGKALQGGGVRDRVELATKFGKFFAGGKPGIRGDPAYVRAACEGSLRRLGVDCIDLYYQHRVDKKVPIEVTIGELKKLVEEGKIRYIGLCEASASTIRRAHAVHPITAVQLEWSLWSRDVEEDIVPTCRELGIGIVAYSPLGKGFFSSGAKLVDSLPDHDFRKLIPRFQPGNIEKNAEIFERVNEMAARKGCTPSQLALAWIHHQGRDVCPIPGTTKIENFNQNVAALSVKLTPAEMAELESYASNVHGDRYPLMMANTTWQDSETPPLSSWKSE

Annotated regions:
phrase: PKPEADMVALIRHAIAAGVTFFDTSDLYGPHTNEVLLGKALQGGGVRDRVELATKFGKFFAGGKPGIRGDPAYVRAACEGSLRRLGVDCIDLYYQHRVDKKVPIEVTIGELKKLVEEGKIRYIGLCEASASTIRRAHAVHPITAVQLEWSLWSRDVEEDIVPTCRELGIGIVAYSPLGKGFFSSGAKLVDSLPDHDFRKLIPRFQPGNIEKNAEIFERVNEMAARKGCTPSQLALAWIHHQGRDVCPIPGTTKIENFNQNVAALSVKLTPAEMAELE
type: DOMAIN
name: NADP_OxRdtase_dom
description: NADP-dependent oxidoreductase domain
Protein sequence:
MQGCSIAVLGATGAVGKVFLSLLEERNFPARSIRLFASSRSAGQRLRVLGQECIVEEPTPEALKGVDIVFISASGEVSRRWAPVAVQAGALVIDDSSVFRMDPQVPLVIPEVNADDLTHHRGIVSIPNCSTTALVMAVYPLHRVNPIQRIIVDTYQSVSGTGRSAMEELREQSRALLDGGEYPARVYPHRIAFNLLPHIDAFLDNGYTKEEWKMVEETRKIMHAPELRISATCVRVPVFLCHSEAVHLELTYPMSPEEAREVLASFPGVAVLDEPKAGRYPMPLIGEGKDPVYVGRIRRDASHPRGLAMWVVSDNLRKGAALNAIQIAETVLQRNLLPTAGRR

Annotated regions:
phrase: SIAVLGATGAVGKVFLSLLEERNFPARSIRLFASSRSAGQRLRVLGQECIVEEPTPEALKGVDIVFISASGEVSRRWAPVAVQAGALVIDDSSVFRMDPQVPLVIPEVNADDLTH
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: IAVLGATGAVGKVFLSLLEERNFPARSIRLFASSRSAGQRLRVLGQECIVEEPTPEALKGVDIVFISASGEVSRRWAPVAVQAGALVIDDSSVFRMDPQVPLVIPEVNADDL
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: PLHRVNPIQRIIVDTYQSVSGTGRSAMEELREQSRALLDGGEYPARVYPHRIAFNLLPHIDAFLDNGYTKEEWKMVEETRKIMHAPELRISATCVRVPVFLCHSEAVHLELTYPMSPEEAREVLASFPGVAVLDEPKAGRYPMPLIGEGKDPVYVGRIRRDASHPRGLAMWVVSDNLR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: ISATCVRVPVFLCH
type: CONSERVED_SITE
name: Asp-semialdehyde_DH_CS
description: Aspartate-semialdehyde dehydrogenase, conserved site
Protein sequence:
MTMRQCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCDPKADSTRLILHAKAQNTIMEMAAEVGSVEDLELEDVLQIGYGDVRCAESGGPEPGVGCAGRGVITAINFLEEEGAYEEDLDFVFYDVLGDVVCGGFAMPIRENKAQEIYIVCSGEMMAMYAANNISKGIVKYAKSGKVRLGGLICNSRKTDREDELIIALAEKLGTQMIHFVPRDNIVQRAEIRRMTVIEYDPTCQQANEYRQLAQKIVNNTKKVVPTPCTMDELESLLMEFGIMEEEDTSIIGKTAAEENAA

Annotated regions:
phrase: DVLGDVVCGGFAM
type: CONSERVED_SITE
name: NifH/chlL_CS
description: NifH/chlL conserved site

phrase: ESGGPEPGVGCA
type: CONSERVED_SITE
name: NifH/chlL_CS
description: NifH/chlL conserved site
Protein sequence:
MAAPGEALTSSGYIAHHLSNLSLYKLGLVGSETSFWNVHIDSLFFSWFTGLIFLGIFYKVAKRTTAGVPGKLQCAVEMIVEFVADNVKDTFHGRNPLIAPLALTIFCWVFLMNVMDLVPIDFLPYPAEHWLGIPYLKVVPSADVNITMAMALGVFALMIYYSIKVKGLGGFAKELALHPFNHPLMIPFNLLIEVVSLLAKPLSLGMRLFGNMFAGEVVFILCAAMLPWYLQWMGSLPWAIFHILVITIQAFVFMMLTIVYLSMAHEDSDH

Annotated regions:
phrase: SLGMRLFGN
type: ACTIVE_SITE
name: ATP_synth_F0_asu_AS
description: ATP synthase, F0 complex, subunit A, active site
Protein sequence:
MAKVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMSPQLFEKAGGKTQTAPVATPQELANYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIGYAAQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEYVAGLAVKLNG

Annotated regions:
phrase: KVLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMSPQLFEKAGGKTQTAPVATPQELANYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIGYA
type: DOMAIN
name: FMN_Rdtase-like_dom
description: NADPH-dependent FMN reductase-like domain

phrase: VLVLYYSMYGHIETMARAVAEGASKVDGAEVVVKRVPETMSPQLFEKAGGKTQTAPVATPQELANYDAIIFGTPTRFGNMSGQMRTFLDQTGGLWASGALYGKLASVFSSTGTGGGQEQTITSTWTTLAHHGMVIVPIGYAAQELFDVSQVRGGTPYGATTIAGGDGSRQPSQEELSIARYQGEY
type: DOMAIN
name: Flavodoxin/NO_synth
description: Flavodoxin/nitric oxide synthase
Protein sequence:
MDPLGAPSQFVDVDTLPSWGDSCQDELNSSDTTAEIFQEDTVRSPFLYNKDVNGKVVLWKGDVALLNCTAIVNTSNESLTDKNPVSESIFMLAGPDLKEDLQKLKGCRTGEAKLTKGFNLAARFIIHTVGPKYKSRYRTAAESSLYSCYRNVLQLAKEQSMSSVGFCVINSAKRGYPLEDATHIALRTVRRFLEIHGETIEKVVFAVSDLEEGTYQKLLPLYFPRSLKEENRSLPYLPADIGNAEGEPVVPERQIRISEKPGAPEDNQEEEDEGLGVDLSFIGSHAFARMEGDIDKQRKLILQGQLSEAALQKQHQRNYNRWLCQARSEDLSDIASLKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIHVMDHIAVKEYVLVYFHTLTSEYNHLDSDFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKVSTWFFTTFSVSGLKDKIHHVDSLHQLFSAISPEQIDFPPFVLEYDARENGPYYTSYPPSPDL

Annotated regions:
phrase: RSPFLYNKDVNGKVVLWKGDVALLNCTAIVNTSNESLTDKNPVSESIFMLAGPDLKEDLQKLKGCRTGEAKLTKGFNLAARFIIHTVGPKYKSRYRTAAESSLYSCYRNVLQLAKEQSMSSVGFCVINSAKRGYPLEDATHIALRTVRRFLEIHGETIEKVVFAVSDLEEGTYQKLLPLY
type: DOMAIN
name: Macro_dom
description: Macro domain

phrase: KVVLWKGDVALLNCTAIVNTSNESLTDKNPVSESIFMLAGPDLKEDLQKLKGCRTGEAKLTKGFNLAARFIIHTVGPKYKSRYRTAAESSLYSCYRNVLQLAKEQSMSSVGFCVINSAKRGYPLEDATHI
type: DOMAIN
name: Macro_dom
description: Macro domain

phrase: KVVLWKGDVALLNCTAIVNTSNESLTDKNPVSESIFMLAGPDLKEDLQKLKGCRTGEAKLTKGFNLAARFIIHTVGPKYKSRYRTAAESSLYSCYRNVLQLAKEQSMSSVGFCVINSAKRGYPLEDATHIALRTVRRFLEIHGETIEKVVFAVSDLEEGTYQKLLPL
type: DOMAIN
name: Macro_GDAP2
description: GDAP2, macro domain

phrase: VNTSNESLTDKNPVSESIFMLAGPDLKEDLQKLKGCRTGEAKLTKGFNLAARFIIHTVGPKYKSRYRTAAESSLYSCYRNVLQLAKEQSMSSVGFCVINSAKRGYPLEDATHI
type: DOMAIN
name: Macro_dom
description: Macro domain

phrase: EDLSDIASLKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIHVMDHIAVKEYVLVYFHTLTSEYNHLDSDFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKVSTWFFTTFSVSGLKDKIHHVDSLHQLFSAISPEQ
type: DOMAIN
name: CRAL-TRIO_dom
description: CRAL-TRIO lipid binding domain

phrase: DIASLKALYQTGVDNCGRTVMVVVGRNIPVTLIDMDKALLYFIHVMDHIAVKEYVLVYFHTLTSEYNHLDSDFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKVSTWFFTTFSVSGLKDKIHHVDSLHQLFSAISPEQIDFPPFVLEYD
type: DOMAIN
name: CRAL-TRIO_dom
description: CRAL-TRIO lipid binding domain

phrase: GRTVMVVVGRNIPVTLIDMDKALLYFIHVMDHIAVKEYVLVYFHTLTSEYNHLDSDFLKKLYDVVDVKYKRNLKAVYFVHPTFRSKVSTWFFTTFSVSGLKDKIHHVDSLHQLFSAISPEQIDFPPFVLEYD
type: DOMAIN
name: CRAL-TRIO_dom
description: CRAL-TRIO lipid binding domain
Protein sequence:
MKVTFMNLEERKKLETKSIDELDLIGKKVCVDTCVVIDGRITELIERGKLKDATIIIPEAVVSELEYQANMGREIGYKGIEELRKLIEKASEHNIKVEYYGERPTREEIFLAKSGEIDAMIRKVAKETNSILLTSDWIQYNLAKAQGIEAYFLEAAEEEVELVLDKYFDEETMSVHLKEGCLPYAKKGKPGEVKLVPIGDKELTKEEMEDIIDNIIKYAEQNNGFFEIQRKGATVIQLGNIRISIARPPFSEALEVTAVRPVVKASLEDYELSDKLMERLKERAEGIFVSGPPGSGKSTFVAALAEFYRSQGKIVKTMESPRDLQVSKEITQYAPLEGDMEKTCDILLLVRPDYTIYDEVRKTRDFEIFADMRMAGVGMVGVVHASKPIDAIQRLIGRVELGVIPQVVDTVIFIKDGKIQKVYEIDFTVKVPYGMVEEDLARPVIEVKDFETGRVEYEIYTYGEQVVVMPIKEEGGKKAPIYGYAEEKLEEILKKLLPRKAKPMVKVTGDNSIDLIVPEKYIGAIIGKGGKEISKLEDMLGLKISVKEKEKEEEKDMERIYRKYEYVNELESTRIYETDKYVVVDVGEDFAGENIRIYIDGKLLTTVTVRNDGTVRINKKTKVGKEILEAIDEGRDIYVDLQ

Annotated regions:
phrase: DLIVPEKYIGAIIGKGGKEISKLEDMLGLKISVKEKEKEEEK
type: DOMAIN
name: KH_dom_type_1
description: K Homology domain, type 1

phrase: VCVDTCVVIDGRITELIERGKLKDATIIIPEAVVSELEYQANMGREIGYKGIEELRKLIEKASEHNIKVEYYGERPTREEIFLAKSGEIDAMIRKVAKETNSILLTSDWIQYNLA
type: DOMAIN
name: PIN_dom
description: PIN domain

phrase: KKVCVDTCVVIDGRITELIERGKLKDATIIIPEAVVSELEYQANMGREIGYKGIEELRKLIEKASEHNIKVEYYGERPTREEIFLAKSGEIDAMIRKVAKETNSILLTSDWIQY
type: DOMAIN
name: PIN_dom
description: PIN domain

phrase: GDNSIDLIVPEKYIGAIIGKGGKEISKLEDMLGLKISVKEKEKEEEKDMERIYRKYEYVNELE
type: DOMAIN
name: KH_dom
description: K Homology domain

phrase: SDKLMERLKERAEGIFVSGPPGSGKSTFVAALAEFYRSQGKIVKTMESPRDLQVSKEITQYAPLEGDMEKTCDILLLVRPDYTIYDEVRKTRDFEIFADMRMAGVGMVGVVHASKPIDAIQRL
type: DOMAIN
name: T2SS/T4SS_dom
description: Type II/IV secretion system domain
Protein sequence:
MKAPYFWSADLDPKSREAAPLTRLLLTPFAMLYLWALRRKLAKARPEAAPVPVVCIGNLTAGGAGKTPVTEAIRNRIRSAGLRAASLSRGHGGAEPGPLKVDPARHTSRDVGDEPLLLAGSGEAWIGRKRPEAARAMAADGAEIILMDDGHQNPSLKKDLTLIVIDAGAPFGNGHVLPKGPLREKVPEGLARADAVILMGAGPVPPEVTASSLPVLRARLAPLAAPPPGPLVAFAGIGRPQKFFDSLAQAGGNVSDAVPFGDHHPYTKGDVQFLRSLAHDHGARLITTTKDHVRLPLDAQSEILAWPVTAVFEDTAALDAVLAPIFKRAGKP

Annotated regions:
Protein sequence:
MEYIEGNTGKWEYVIGLEIHAQISSKSKLFSGSSTLFAASPNSQVSYVDAAMPGMLPVLNKHCVYQAIKTGLVLKAKINKYSVFDRKNYFYADLPQGYQISQFYYPIVQDGMIEIPTSTGDLKTIRINRLHLEQDAGKSIHDQSPYYSLIDLNRAGIGLMEIVTEPDISSPEEAAEFVKKLRNLLRYIGSCDGDMEKGSMRCDANISVRRIGEALGTRCEIKNINSIRNIIKAIEFEAKRQVDLLESGETIIQETRLFNVDSCETKTMRLKEEALDYRYFPDPDLLPLIIPDELINELKASLPELPDQKIEKYIKKFGLSQYDAGIIVSDEAVAEYFEKAANECNPKMLTNWLITELFGQLNKASIGIRECKITPSDFAKLIKLIEHDTISGKIAKTVFEIMFETGKAPDKIVEEKRLVQISDNKILNTVIDEVIAENSKSVKCYKSGKDKLFGFFVGQVMKKTECKANPTLVNKLLKDKLDS

Annotated regions:
phrase: EYFEKAANECNPKMLTNWLITELFGQLNKASIGIRECKITPSDFAKLIKLIEHDTISGKIAKTVFEIMFETGKAPDKIVEEKRLVQISDNKILNTVIDEVIAENSKSVKCYKSGKDKLFGFFVGQVMKKTECKANPTLVNKLLKDK
type: DOMAIN
name: Asn/Gln_amidotransferase
description: Asn/Gln amidotransferase

phrase: VIGLEIHAQISSKSKLFSGSSTLFAASPNSQVSYVDAAMPGMLPVLNKHCVYQAIKTGLVLKAKINKYSVFDRKNYFYADLPQGYQISQFYYPIVQDGMIEIPTSTGDLKTIRINRLHLEQDAGKSIHDQSPYYSLIDLNRAGIGLMEIVTEPDISSPEEAAEFVKKLRNLLRYIGSCDGDMEKGSMRCDANISVRRIGEALGTRCEIKNINSIRNIIKAIEFEAKRQVDLLESGETIIQETRLFNVDSCETKTMRLKEEALDYRYFPDPDLLPLIIPDEL
type: DOMAIN
name: Asn/Gln-tRNA_Trfase_suB/E_cat
description: Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic

phrase: EYFEKAANECNPKMLTNWLITELFGQLNKASIGIRECKITPSDFAKLIKLIEHDTISGKIAKTVFEIMFETGKAPDKIVEEKRLVQISDNKILNTVIDEVIAENSKSVKCYKSGKDKLFGFFVGQVMKKTECKANPTLVNKLLKDK
type: DOMAIN
name: Asn/Gln_amidotransferase
description: Asn/Gln amidotransferase

phrase: LNRAGIGLMEIVTE
type: CONSERVED_SITE
name: Gln-tRNA_amidoTrfase_suB_CS
description: Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site
Protein sequence:
MLKEVPIKRRQSTKIYVGNVPVGGDAPIAVQSMTNTRTTDIEATIAQIKALERVGADIVRVSVPTMDAAEAFKVIKQQVNVPLVADIHFDYRIALKVAEYGVDCLRINPGNIGNEERIRAVVDCAKDKNIPIRIGVNAGSLERDLQEKYGEPTPQALLESALRHVEILDRFNFDQFKVSVKASDVFLAVESYRLLAKAIKQPIHLGITEAGGARAGSVKSAIGLGLLLSEGIGDTLRVSLAADPVDEVKVGFDILKSLRIRSRGINFVACPTCSRQEIDVIATVNALEQRLEDILTPMDVSIIGCVVNGPGEALVSDLGVTGSNKMSGFYLDGVRQKERFDNDKLIDQLEAKIRAKVAQQHHRIAIEQI

Annotated regions:
Protein sequence:
MAKLHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAIADKKLLDNAAADLTAISGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFERLITIAVPRIRDFRGLSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAKSDEEGRALLAAFDFPFRK

Annotated regions:
phrase: PIGCKVTLRGERMWEFFERLITIAVPRIRDFRGLSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAKSDEEGRALLAAFDFP
type: DOMAIN
name: Ribosomal_uL5_C
description: Large ribosomal subunit protein uL5, C-terminal

phrase: SVMQVPRVEKITLNMGVGEAIADKKLLDNAAADLTAISGQKPLITKARKSVAGFKI
type: DOMAIN
name: Ribosomal_uL5_N
description: Large ribosomal subunit protein uL5, N-terminal

phrase: LTAISGQKPLITKARK
type: CONSERVED_SITE
name: Ribosomal_uL5_CS
description: Large ribosomal subunit protein uL5, conserved site
Protein sequence:
MLRIAIAKGRLMDSLINYLDVIEYTTLSETLKNRERQLLLSVDNIECILVKGSDVPIYVEQGMADIGIVGSDILDERQYNVNNLLNMPFGACHFAVAAKPETTNYRKIATSYVHTAETYFKSKGIDVELIKLNGSVELAGVVDMVDGIVDIVQTGTTLKANGLVEKQHISDINARLITNKAAYFKKSQLIEQFIRSLEVSIANA

Annotated regions:
phrase: GSDVPIYVEQGMADIGIVGSDILDERQYNVNNLLNMPFGACHFAVAAKPETTNYRKIATSYVHTAETYFKSKGIDVELIKLNGSVELAGVVDMVDGIVDIVQTGTTLKANGLVEKQHISDINARLITNKAAYFKKSQLIEQFIRSL
type: DOMAIN
name: ATP_PRibTrfase_cat
description: ATP phosphoribosyltransferase, catalytic domain

phrase: LRIAIAKGRLMDSLINYLDVIEYTTLSETLKNRERQLLLSVDNIECILVKGSDVPIYVEQGMADIGIVGSDILDERQYNVNNLLNMPFGACHFAVAAKPETTNYRKIATSYVHTAETYFKSKGIDVELIKLNGSVELAGVVDMVDGIVDIVQTGTTLKANGLVEKQHISDINARLI
type: DOMAIN
name: ATP_PRibTrfase_cat
description: ATP phosphoribosyltransferase, catalytic domain
Protein sequence:
MTNMRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYIFLETWNIGVILLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAAIAMVHLLFLHETGSNNPTGISSDTDKIPFHPYYTIKDILGALLLILMLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILVLMPLLHTSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPTASTIENNLLKW

Annotated regions:
phrase: IDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYIFLETWNIGVILLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAAIAMVHLLFLHET
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILVLMPLLHTSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMY
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: PLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYIFLETWNIGVILLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAAIAMVHLLFLHETGS
type: DOMAIN
name: Cytochrome_b_N_euk/bac
description: Cytochrome b/b6, N-terminal domain, eukaryotic/bacterial

phrase: NPTGISSDTDKIPFHPYYTIKDILGALLLILMLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILVLMPLLHTSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQL
type: DOMAIN
name: Cytochrome_b_C_euk/bac
description: Cytochrome b/b6, C-terminal domain, eukaryotic/bacterial

phrase: GISSDTDKIPFHPYYTIKDILGALLLILMLMLLVLFAPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALILSILILVLMPLLHTSKQRSMMFRPISQCLFWILVADLLTLTWIGGQPVEHPYIIIGQLASIMYFLLILVLMPTASTIENNLLK
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: MTNMRKTHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGICLILQILTGLFLAMHYTSDTTTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYIFLETWNIGVILLFTTMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIAAIAMVHLLFLHETGSNNP
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain
Protein sequence:
MDKLLDRFFNYVSFDTQAKANVKSVPSTQGQRKLAQALQQELLTLGFSHVTLSDHGCVMATLPANVSWPVPTIGFIAHLDTSPDFSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGHTLITTDGKTLLGADDKAGIAEIITAMVRLKHRNVPHGDIRIAFTPDEEVGKGAQFFNVAEFDAQWAYTVDGGGIGELEFENFNAASVAIKIVGNNVHPGSAKGVMVNALSLATRYHQELPVDETPECTEGYDGFYHLQSIKGTVERAEMHYIVRDFNRDSFEARKKNMVDIAKRVGKGLHRDCYIEIVIDDSYYNMREQIIKHPHIIELAQQAMLDCDITPIMKPIRGGTDGAQLSFKGLPCPNIFTGGYNYHGKHEFITLEGMEKAVAVIMRISELTAKRAKES

Annotated regions:
phrase: GADDKAGIAEIITAMVRLKHRNVPHGDIRIAFTPDEEV
type: CONSERVED_SITE
name: ArgE/DapE_CS
description: ArgE/DapE/ACY1/CPG2/YscS, conserved site

phrase: ENFNAASVAIKIVGNNVHPGSAKGVMVNALSLATRYHQELPVDETPECTEGYDGFYHLQSIKGTVERAEMHYIVRDFNRDSFEARKKNMVDIAKRV
type: DOMAIN
name: Peptidase_M20_dimer
description: Peptidase M20, dimerisation domain

phrase: IGFIAHLDT
type: CONSERVED_SITE
name: ArgE/DapE_CS
description: ArgE/DapE/ACY1/CPG2/YscS, conserved site
Protein sequence:
MNPFSHVFYTLIAALCRSIPLNPFKIIQITGSSYFRAMLLQNSINTDFQHTLASDIQINGVGIHSGATVEMTLKPAEPNTGIVFQRVDLPNQPVVKADVDNVVETTRSTTIEANGARVSTIEHLMAALVGCGVDNAVVQLNAPEVPILDGSSAPFVEAIASTGIQQQDAAKVWYTLQHNISFVDEGKKVEMVALPYHEYRINTLIDFNSPVLGTQHAAINSISQFAEEVAPCRTFCFFHELEYLLDNNLIKGGDLNNAIVVVDRPVSETQVQRIAQIFEKDNVKVNEGGILNNLDLRFPNEPARHKLLDVIGDLALVGFPFKAHIIANRPGHASNVAFARKIKEHIKKYKNKKDIPVYDPAKPPVMDVHAIEKKLPHRYPFLLVDKIIELTEKYVIAVKNVTYNEPFFQGHFPGNCVMPGVLQVEALAQTGGLLTIPDDPENDYDTYFLKIDNCKFKQKVVPGDTLVLKMELMNPVRRGICEMKGTIFVGDKLVAEADMVAQIVKKPKVKV

Annotated regions:
Protein sequence:
MKLVLMGLPGAGKGTQAEQIVEKYNIPHISTGDMFRAAMKNNTELGRKAKSFMDNGDLVPDEVTNGIVRERLSEDDAKDGFLLDGFPRTVEQAQELENILSDLGTELDAVINIDVEKDVLMKRLTGRWICRTCGKTYHEIYNPPKVAGKCDLDGGELYQRDDDKKETVEKRLNVNMKQTKPLLDFYSEKGKLHNINGEQDIKDVFVDVEKILTSF

Annotated regions:
phrase: RWICRTCGKTYHEIYNPPKVAGKCDLDGGELYQRD
type: DOMAIN
name: Adenylate_kinase_lid-dom
description: Adenylate kinase, active site lid domain

phrase: FLLDGFPRTVE
type: CONSERVED_SITE
name: Adenylat_kinase_CS
description: Adenylate kinase, conserved site
Protein sequence:
MNLKRRLSVSNDIELTPMMKQFLDLKAKHPDAVMLFRCGDFYETYSTDAIIAAEILGITLTKRANGKGKTVEMAGFPHHALDTYLPKLIRAGKRVAICDQLEDPKTTKKLVKRGITELVTPGVSINDNVLNYKENNFLAAVHFGKSACGIAFLDISTGEFLTAEGPFDYVDKLLNNFAPKEILFERGKRGMFEGNFGSKFFTFELDDWVFTESSSREKLLKHFETKNLKGFGVEHLKNGIIASGAILQYLDMTEHTQVGHITSLARIEEDKYVRLDKFTVRSLELIGSMNDGGSSLLHVIDKTISPMGARLLKRWMVFPLKDEKPINDRLNVVEYFFRKPDFRELIEDELHRIGDLERIISKVAVGRVSPREVVQLKVALQAIEPIKEACQQADNPSLNRIGEQLNLCISIRDRIEKEINNDPPLLINKGGVIKDGVDTELDELRQIAYSGKDYLLKIQQRESELTGIPSLKIAYNSVFGYYIEVRNVHKDKVPQEWIRKQTLVNAERYITQELKEYEEKILGAEDKILVLETRLYTELVQALSEFIPAIQINANQIARIDCLLSFANVAKENNYIRPVIEDNDVLDIRQGRHPVIEKQLPIGEKYIANDVLLDNATQQVIIITGPNMAGKSALLRQTALITLLAQIGSFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMNEASDILNNISSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPKAKARTLFATHYHELNEMEKSFKRIKNYNVSVKEVDNKVIFLRKLERGGSEHSFGIHVAKMAGMPKSIVKRANEILKQLESDNRQQGISGKPLAEVSENRGGMQLSFFQLDDPILCQIRDEILHLDVNNLTPIEALNKLNDIKKIVRGK

Annotated regions:
phrase: NFLAAVHFGKSACGIAFLDISTGEFLTAEGPFDYVDKLLNNFAPKEILFERGKRGMFEGNFGSKFFTFELDDWVFTESSSREKLLKHFETKNLKGFGVEHLKNGIIASGAILQYLDMTEHTQVGH
type: DOMAIN
name: DNA_mmatch_repair_MutS_con_dom
description: DNA mismatch repair protein MutS, connector domain

phrase: IIITGPNMAGKSALLRQTALITLLAQIGSFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMNEASDILNNISSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPKAKARTLFATHYHELNEMEKSFKRIKNYNVSVKEVDNKVIFLRKLERGGSEHSFGIHVAKMAGMPKSIVKRANEILKQL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: QQVIIITGPNMAGKSALLRQTALITLLAQIGSFVPAESAHIGLVDKIFTRVGASDNISVGESTFMVEMNEASDILNNISSRSLVLFDELGRGTSTYDGISIAWAIVEYIHEHPKAKARTLFATHYHELNEMEKSFKRIKNYNVSVKEVDNKVIFLRKLERGGSEHSFGIHVAKMAGMPKSIVKRANEIL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: TVRSLELIGSMNDGGSSLLHVIDKTISPMGARLLKRWMVFPLKDEKPINDRLNVVEYFFRKPDFRELIEDELHRIGDLERIISKVAVGRVSPREVVQLKVALQAIEPIKEACQQADNPSLNRIGEQLNLCISIRDRIEKEINNDPPLLINKGGVIKDGVDTELDELRQIAYSGKDYLLKIQQRESELTGIPSLKIAYNSVFGYYIEVRNVHKDKVPQEWIRKQTLVNAERYITQELKEYEEKILGAEDKILVLETRLYTELVQALSEFIPAIQINANQIARIDCLLSF
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: GVDTELDELRQIAYSGKDYLLKIQQRESELTGIPSLKIAYNSVFGYYIEVRNVHKDKVPQEWIRKQTLVNAERYITQELKEYEEKILGAE
type: DOMAIN
name: DNA_mismatch_repair_MutS_clamp
description: DNA mismatch repair protein MutS, clamp

phrase: SLVLFDELGRGTSTYD
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: TPMMKQFLDLKAKHPDAVMLFRCGDFYETYSTDAIIAAEILGITLTKRANGKGKTVEMAGFPHHALDTYLPKLIRAGKRVAICDQLEDPKTTKKLVKRGITELVTPGVSIN
type: DOMAIN
name: DNA_mismatch_repair_MutS-lik_N
description: DNA mismatch repair protein MutS-like, N-terminal

phrase: DGGSSLLHVIDKTISPMGARLLKRWMVFPLKDEKPINDRLNVVEYFFRKPDFRELIEDELHRIGDLERIISKVAVGRVSPREVVQLKVALQAIEPIKEACQQADNPSLNRIGEQLNLCISIRDRIEKEINNDPPLLINKGGVIKDGVDTELDELRQIAYSGKDYLLKIQQRESELTGIPSLKIAYNSVFGYYIEVRNVHKDKVPQEWIRKQTLVNAERYITQELKEYEEKILGAEDKILVLETRLYTELVQALSEFIPAIQINANQIARIDCLLSFANVAKENNYIRPVIEDNDVLDIRQGRHPVIEK
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core
Protein sequence:
MTAIEDILQITTDPSDTRGYSLLKSEEVPQGSTLGVDFIDTLLLYQLTENEKLDKPFEYLNDCFRRNQQQKRITKNKPNAESLHSTFQEIDRLVIGYGVVALQIENFCMNGAFINYITGIVSNVNSYTDFLSQIIQRAILEGTALDLLNAVFPTLLEYCNKHVSHFDLNESVIYNNVLTIFELFVTFKPIAEIFTKIDGFFADYSCKPQDFERKTILGPILSLSPIEAAVAIRNYGDNLLRSKQQTAMIHESLQAEHKVVIDRLFFIVDKLVRGSLNSRTDMISYFAHIANKNHLRRADHPPFKELSSNGFMSNITLLLVRFSQPFLDISYKKIDKIDANYFNNPSLFIDLSGETRLNSDFKEADAFYDKNRKTADSKPNFISDCFFLTLTYLHYGLGGTLSFEEKMGSEIKALKEEIEKVKKIAANHDVFARFITAQLSKMEKALKTTESLRFALQGFFAHRSLQLEVFDFICGASTFLIRVVDPEHEFPFKQIKLPLIPDQIGVENVDNADFLRAHAPVPFKYYPEFVVEGPVNYSLYISKYQTSPIFRNPRLGSFVEFTTMVLRCPELVSNPHLKGKLVQLLSVGAMPLTDNSPGFMMDIFEHDELVNKNLLYALLDFYVIVEKTGSSSQFYDKFNSRYSISIILEELYYKIPSYKNQLIWQSQNNADFFVRFVARMLNDLTFLLDEGLSNLAEVHNIQNELDNRARGAPPTREEEDKELQTRLASASRQAKSSCGLADKSMKLFEIYSKDIPAAFVTPEIVYRLASMLNYNLESLVGPKCGELKVKDPQSYSFNPKDLLKALTTVYINLSEQSEFISAVAKDERSFNRNLFVRAVDILGRKTGLASPEFIEKLLNFANKAEEQRKADEEEDLEYGDVPDEFLDPLMYTIMKDPVILPASKMNIDRSTIKAHLLSDSTDPFNRMPLKLEDVTPNEELRQKILCFKKQKKEEAKHKASE

Annotated regions:
phrase: EFLDPLMYTIMKDPVILPASKMNIDRSTIKAHLLSDSTDPFNRMPLKLEDVTPNEELRQKILC
type: DOMAIN
name: Ubox_domain
description: U-box domain

phrase: LGPILSLSPIEAAVAIRNYGDNLLRSKQQTAMIHESLQAEHKVVIDRLFFIVDKLVRGSLNSRTDMISYFAHIANKNHLRRADHPPFKELSSNGFMSNITLLLVRFSQPFLDISYKKIDKIDANYFNNPSLFIDLSGETRLNSDFKEADAFYDKNRKTADSKPNFISDCFFLTLTYLHYGLGGTLSFEEKMGSEIKALKEEIEKVKKIAANHDVFARFITAQLSKMEKALKTTESLRFALQGFFAHRSLQLEVFDFICGASTFLIRVVDPEHEFPFKQIKLPLIPDQIGVENVDNADFLRAHAPVPFKYYPEFVVEGPVNYSLYISKYQTSPIFRNPRLGSFVEFTTMVLRCPELVSNPHLKGKLVQLLSVGAMPLTDNSPGFMMDIFEHDELVNKNLLYALLDFYVIVEKTGSSSQFYDKFNSRYSISIILEELYYKIPSYKNQLIWQSQNNADFFVRFVARMLNDLTFLLDEGLSNLAEVHNIQNELDNRARGAPPTREEEDKELQTRLASASRQAKSSCGLADKSMKLFEIYSKDIPAAFVTPEIVYRLASMLNYNLESLVGPKCGELKVKDPQSYSFNPKDLLKALTTVYINLSEQSEFISAVAKDERSFNRNLFVRAVDILGRKTGLASPEFIEKLLNFANKA
type: DOMAIN
name: Ub_conjug_fac_E4_core
description: Ubiquitin conjugation factor E4, core

phrase: DVPDEFLDPLMYTIMKDPVILPASKMNIDRSTIKAHLLSDSTDPFNRMPLKLEDVTPNEELRQKILCFKKQKKE
type: DOMAIN
name: Ubox_domain
description: U-box domain

phrase: VPDEFLDPLMYTIMKDPVILPASKMNIDRSTIKAHLLSDSTDPFNRMPLKLEDVTPNEELRQKILCFKKQKK
type: DOMAIN
name: Ubox_domain
description: U-box domain