nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MKLLLALAGLLAPLAMLQTSNGATPALLGEVENSVVLSCMEEAKQLVDRAYKERRESIKRSLQSGSASPTELLFYFKQPVAGTRTAVRAADYLHVALDLLKRKLQPLWPRPFNVTDVLTPAQLNLLSVSSGCAYQDVRVTCPPNDKYRTITGHCNNRRSPTLGASNRAFVRWLPAEYEDGVSMPFGWTPGVNRNGFKVPLARQVSNAIVRFPNDQLTKDQERALMFMQWGQFLDHDITLTPEPATRFSFFTGLNCETSCLQQPPCFPLKIPPNDPRIKNQKDCIPFFRSCPACTRNNITIRNQINALTSFVDASGVYGSEDPLARKLRNLTNQLGLLAINTRFQDNGRALMPFDSLHDDPCLLTNRSARIPCFLAGDMRSSEMPELTSMHTLFVREHNRLATQLKRLNPRWNGEKLYQEARKIVGAMVQIITYRDYLPLVLGPAAMKKYLPQYRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLNNQYRPTGPNPRVPLSKVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIVVDEIRERLFEQVMRIGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPSTVGELGTVLKNLELARKLMAQYGTPNNIDIWMGGVSEPLEPNGRVGQLLACLIGTQFRKLRDGDRFWWENPGVFSKQQRQALASISLPRIICDNTGITTVSKNNIFMSNTYPRDFVSCNTLPKLNLTSWKET

Annotated regions:
Protein sequence:
MSDRLVHLAANLEKVLGKRVQSIEIALGEVTVVVNADTYFESAMLMRDDPSLAFEQLIDLCGVDYQDFRDGAWNGQRFGVVSHLLSLEHNWRLRVRVFAPDDSYPLVASITPVWSSANWFEREAFDLYGIIFEGHEDLRRILTDYGFIGHPFRKDFPISGNVEMRYDPELKRVVYQPVTIEAREITPRIVREEQYGDPV

Annotated regions:
phrase: VVVNADTYFESAMLMRDDPSLAFEQLIDLCGVDYQDFRDGAWNGQRFGVVSHLLSLEHNWRLRVRVFAPDDSYPLVASITPVWSSANWFEREAFDLYGIIFEGHEDLRRILTDYGFIGHPFRKDFPISG
type: DOMAIN
name: NADH_UbQ_OxRdtase_30kDa_su
description: NADH:ubiquinone oxidoreductase, 30kDa subunit

phrase: EREAFDLYGIIFEGHEDLRRI
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_CS
description: NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site
Protein sequence:
MNGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSASIYNPVIYIMMNKQFRNCMLTTICCGKNPFAEEEGATTVSKTETSQVAPA

Annotated regions:
phrase: INFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNVEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLAGWSRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPIFMTLPAFFAKSASIYNPVI
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM

phrase: NGTEGPNFYVPFSNKTGVVRSPFEYPQYYLAEPWQ
type: DOMAIN
name: Rhodopsin_N
description: Rhodopsin, N-terminal

phrase: LPAFFAKSASIYNPVI
type: BINDING_SITE
name: Retinal_BS
description: Visual pigments (opsins) retinal binding site
Protein sequence:
MGQKKVAVIGAGISGLGAIKCCLEEGLEPTCFEKSDDIGGLWRFREKTEDGAPSIYRSVTINTSKEMSCFSDFPIPDHFPNYMHNSQLLEYLRMYATHFDLLKHISFQTEVVSVRKRPDFPSSGQWDVTTEAAGKKESHVFDGILVCSGHHTEPHLPLDSFPGINRFKGHYFHSREYKSPEEFAGKRVVVIGVGNSGADVAVELSHTAKQVFLSTRQGAWIWNRVWDAGYPMDTVLFTRFNEVLKKTLTTSMLNDWAENKLNSRFDHANYGLQPQKRFLNSQVSINDNLPNHIISGRIVVKPNVKEFTESAAVFEDGSAEEPVDVVIFATGYTFSFPFFEKPAEVIDDQVSLFSRVFPPTLERPTLAFVGLVQPVGALIPTAELQSRWATRVFKGLCKLPSAEDMMVDIARKREAMEKRFAQSPRHCLQEDYIKYMDRLASLAGVKPSLPSLLLSDPKLAREVFFGPCTPYQYRLQGPGRWAGARRAILTQRGRILKPLRTGPVRSGPNLSRWPSWFMCLCVGAGLLLFVRSCC

Annotated regions:
Protein sequence:
MKLVLATHNAHKVEELRRILGPQLEGIELIGYDGPEPVEDGDTFAENALIKARAAALHTGLPAIADDSGVCVDALAGAPGIHSARYAGTRDDGDNRRMLLENLSGESSRSAHFECAAALVVPPAVGSVGPDGPPELAASFEHVETGIWPGTVLREEVGTHGFGYDPIFSPAGYSVSSAELSPDEKNAISHRAIAFERLIVVVREQLLD

Annotated regions:
Protein sequence:
MAKGQSLQDPYLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVNQMVYKHAISTVVPARSVSHHNNPQQQQQHSQQTESAAPAAEPQAE

Annotated regions:
phrase: DPYLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVNQMVYKHAISTVVPARS
type: DOMAIN
name: Sm
description: Sm domain
Protein sequence:
MAAPPARARADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDSVNKILVGNKADMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEVFFSIAKDIKQRLADTDARAEPQTIKINQSDQGAGTSQATQKSACCGT

Annotated regions:
phrase: YLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDSVNKILVGNKADMDESKRAVPKSKGQALADEYGMKFFETSAKTNLNVEEV
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain
Protein sequence:
MLQPKKTKFRRQQKGSQKGNAQRGNQLAFGSFGIKSLETKWITGRQIEAARIAVTRYMQRQGQIWIRIFPDKPITRKPADVRMGKGKGAPEGFVAPVTPGRIIIEAEGVPYEVAKEALRLAAQKLPVTTKFIVRRDYDAQNQNA

Annotated regions:
phrase: RMGKGKGAPEG
type: CONSERVED_SITE
name: Ribosomal_uL16_CS
description: Large ribosomal subunit protein uL16, conserved site

phrase: RGNQLAFGSFGIKSLETKWITGRQIEAARIAVTRYMQRQGQIWIRIFPDKPITRKPADVRMGKGKGAPEGFVAPVTPGRIIIEAEGVPYEVAKEALRLAAQKLPVTTKF
type: DOMAIN
name: Ribosomal_uL16_dom
description: Large ribosomal subunit protein uL16 domain
Protein sequence:
MRTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADSLPLDANHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVEISFMTALQVREVMEALVRHLWLEVKGVDLGDFPVMTFAEAERRYGSDKPDLRNPMELVDVADLLKSVEFAVFAGPANDPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVNERAKGLDGINSPVAKFLTADIVDAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGKDLSLTDEDKWAPLWVIDFPMFEDDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVANAYDMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTEAPSFANQAALTELGIQVVKKAENN

Annotated regions:
phrase: RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTIINRADSLPLDANHVNTEEARLKYRYLDLRRPE
type: DOMAIN
name: Asp-tRNA-ligase_1_N
description: Aspartate-tRNA ligase, type 1, anticodon recognition domain

phrase: LKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVEISFMTALQVREVMEALVRHLWLEVKGVDLGDFPVMTFAEAERRYGSDKPDLRNPMELVDVADLLKSVEFAVFAGPANDPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVNERAKGLDGINSPVAKFLTADIVDAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGKDLSLTDEDKWAPLWVIDFPMFEDDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVANAYDMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKT
type: DOMAIN
name: AspRS_core
description: Aspartate-tRNA ligase, type 1, core domain

phrase: VTLCGWVNRRRDLGSLIFIDMRDREGIVQVFFDPDRADALKLASELRNEFCIQVTGTVRARDAKNVNADMATGEIEVLASSLTI
type: DOMAIN
name: NA-bd_OB_tRNA
description: OB-fold nucleic acid binding domain, AA-tRNA synthetase-type

phrase: FAGPANDPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVNERAKGLDGINSPVAKFLTADIVDAILERTGAQDGDMIFFGADNKKVVADA
type: DOMAIN
name: GAD_dom
description: GAD domain

phrase: EEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVEISFMTALQVREVMEALVRHLWLEVKGVDLGDFPVMTFAEAERRYGSDKPDLRNPMELVDVADLLKSVEFAVFAGPANDPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVNERAKGLDGINSPVAKFLTADIVDAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGKDLSLTDEDKWAPLWVIDFPMFEDDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVANAYDMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPK
type: DOMAIN
name: Aa-tRNA-synt_II
description: Aminoacyl-tRNA synthetase, class II (D/K/N)

phrase: LKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDVEISFMTALQVREVMEALVRHLWLEVKGVDLGDFPVMTFAEAERRYGSDKPDLRNPMELVDVADLLKSVEFAVFAGPANDPKGRVAALRVPGGAQLSRKQIDDYGNFVKIYGAKGLAYIKVNERAKGLDGINSPVAKFLTADIVDAILERTGAQDGDMIFFGADNKKVVADALGALRLKLGKDLSLTDEDKWAPLWVIDFPMFEDDGEGGLTAMHHPFTAPRDMTASELKTAPEEAVANAYDMVINGYEVGGGSVRIHNGEMQQTVFGILGINEQEQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAF
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II
Protein sequence:
MGLTLTQKILSAKAGREVKPGELIEIDVDMVLGNDITAPVAIKEFEKIGVDKVFDNTKIALVPDHFVPSKDIKSAEQVNVMRKFAKKYNIVNFFEVGRMGIEHALLPEQGLVLPGDVVIGADSHTCTYGALTCFATGVGSTDMAAAMATGKAWFKVPEAIKFVLKGNLGKWVSGKDVILYIIGKIGVDGALYKSMEFTGNIKALSIDDRFTIANMAIEAGAKNGIFDFDEITEAYVKKRAKREYKVFERDEDAEYSEVIEINLDDIRPQVAFPHLPENTRSIDEVGKVKIDQVVIGSCTNGRLSDMEIAYRILKGKKVHPDVRLIIFPATQEIYLECVKRGYIEEFIKAGAAVSTPTCGPCLGGHMGVLAKGERALATTNRNFVGRMGHPESEVYLASPAVAAASAIAGYIVSPEEVE

Annotated regions:
phrase: VGKVKIDQVVIGSCTNGRLSDMEIAYRILKGKKVHPDVRLIIFPATQEIYLECVKRGYIEEFIKAGAAVSTPTCGPCLGGHMGVLAKGERALATTNRNFVGRMGHPESEVYLASPAVAAASAIA
type: DOMAIN
name: Acoase/IPM_deHydtase_lsu_aba
description: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain

phrase: KILSAKAGREVKPGELIEIDVDMVLGNDITAPVAIKEFEKIGVDKVFDNTKIALVPDHFVPSKDIKSAEQVNVMRKFAKKYNIVNFFEVGRMGIEHALLPEQGLVLPGDVVIGADSHTCTYGALTCFATGVGSTDMAAAMATGKAWFKVPEAIKFVLKGNLGKWVSGKDVILYIIGKIGVDGALYKSMEFTGNIKALSIDDRFTIANMAIEAGAKNGIFDFDEITEAYVKKRAKREYKVFERDEDAEYSEVIEINLDDIRPQVAFPHLPENTRSIDE
type: DOMAIN
name: Acoase/IPM_deHydtase_lsu_aba
description: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain

phrase: EHALLPEQ
type: DOMAIN
name: Acoase/IPM_deHydtase_lsu_aba
description: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain

phrase: LPGDVVIGADSHT
type: DOMAIN
name: Acoase/IPM_deHydtase_lsu_aba
description: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain

phrase: TYGALTCFATGVGST
type: DOMAIN
name: Acoase/IPM_deHydtase_lsu_aba
description: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain

phrase: VIGSCTNGRLS
type: DOMAIN
name: Acoase/IPM_deHydtase_lsu_aba
description: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain

phrase: GAAVSTPTCGPCL
type: DOMAIN
name: Acoase/IPM_deHydtase_lsu_aba
description: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain

phrase: IDQVVIGSCTNGRLSD
type: BINDING_SITE
name: Aconitase_4Fe-4S_BS
description: Aconitase family, 4Fe-4S cluster binding site

phrase: MVLGNDITAPVAIKEFEKIGVDKVFDNTKIALVPDHFVPSKDIKSAEQVNVMRKFAKKYNIVNFFEVGRMGIEHALLPEQGLVLPGDVVIGADSHTCTYGALTCFATGVGSTDMAAAMATGKAWFKVPEAIKFVLKGNLGKWVSGKDVILYIIGKIGVDGALYKSMEFTGNIKALSIDDRFTIANMAIEAGAKNGIFDFDEITEAYVKKRAKREYKVFERDEDAEYSEVIEINLDDIRPQVAFPHLPENTRSIDEVGKVKIDQVVIGSCTNGRLSDMEIAYRILKGKKVHPDVRLIIFPATQEIYLECVKRGYIEEFIKAGAAVSTPTCGPCLGGHMGVLAKGERALATTNRNFVGRMGHPESEVY
type: DOMAIN
name: IPMI_cat
description: 3-Isopropylmalate dehydratase, catalytic domain

phrase: GAAVSTPTCGPCL
type: BINDING_SITE
name: Aconitase_4Fe-4S_BS
description: Aconitase family, 4Fe-4S cluster binding site
Protein sequence:
MFALRAAAKADKNLLPFLGQLSRSHAAKAAKAAAVANGKIVAVIGAVVDVQFDDNLPPILNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDTGSPIRIPVGAETLGRIMNVIGEPIDERGPIPSAKTSPIHAEAPEFVDMSVEQEILVTGIKVVDLLAPYCKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYNEMI

Annotated regions:
phrase: IVAVIGAVVDVQFDDNLPPILNALEVDNRSPRLVLEVAQHLGENTVRTIAMDGTEGLVRGQKVLDT
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_N
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain

phrase: GIKVVDLLAPYCKGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGERTREGNDLYNE
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_nucl-bd
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain
Protein sequence:
MQSTDTKEKNKNASGAVEHTPLMKQFFAAKSDYPDLLLFFRMGDFYELFYDDARKAARLLDITLTQRGSSGGAPIPMAGVPVHAYEGYLARLVALGESVAICEQIGDPALAKGLVERKVVRIVTPGTVTDEALLDERRDTLLMAISRSKHGYGLAWADLAGGRFLVNEVDSADALEAEIARLEPAELLVPDEDNWPDFLRGRTGVRRRPPWLFDADSGRRQLLAFFKLHDLSGFGIDDKPCATAAAGALLGYVEETQKQRLPHLTSIAMEVASEAISMNAATRRHLELDTRVDGDTRNTLLGVLDSTVTPMGGRLLRRWLHRPLRLRDVLLQRHHAVGTLIDAGADADLREAFRALGDLERILTRVALRSARPRDFSTLRDGLALLPKVRTILAPLDSPRLQTLHAELGEHDATAHLLISAVAETPPLKLSDGGVIATGYDAELDELRRLSTNADQFLIDLEQRERASSGIATLKVGYNRVHGYYIEISKGQAEKAPLHYSRRQTLTNAERYITEELKSFEDKVLSARERSLSREKLLYEGLLDALGTELEGLKRCAGALSELDVLAGFAERAQALDWSQPELDHAPCLRIEHGRHPVVEAVREQPFEPNDLDLHSDRRMLVITGPNMGGKSTYMRQNALIVLLAHIGSYVPASRAVIGPIDRILTRIGAGDDLARGQSTFMVEMAETSYILHHATPQSLVLMDEIGRGTSTYDGLALADAVARHLAHTNRCYTLFATHYFELTALADESHAGGASGIANVHLDAVEHGERLVFMHAVKDGPANRSFGLQVAALAGLPKAAVTQARRRLVELEQRGGESHSAQMAPTALDAPQQFGLFTAPSSAAQEALQALDPDELTPKQALEALYRLKALL

Annotated regions:
phrase: LVITGPNMGGKSTYMRQNALIVLLAHIGSYVPASRAVIGPIDRILTRIGAGDDLARGQSTFMVEMAETSYILHHATPQSLVLMDEIGRGTSTYDGLALADAVARHLAHTNRCYTLFATHYFELTALADESHAGGASGIANVHLDAVEHGERLVFMHAVKDGPANRSFGLQVAALAGLPKAAVTQARRRLVEL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: ATRRHLELDTRVDGDTRNTLLGVLDSTVTPMGGRLLRRWLHRPLRLRDVLLQRHHAVGTLIDAGADADLREAFRALGDLERILTRVALRSARPRDFSTLRDGLALLPKVRTILAPLDSPRLQTLHAELGEHDATAHLLISAVAETPPLKLSDGGVIATGYDAELDELRRLSTNADQFLIDLEQRERASSGIATLKVGYNRVHGYYIEISKGQAEKAPLHYSRRQTLTNAERYITEELKSFEDKVLSARERSLSREKLLYEGLLDALGTELEGLKRCAGALSELDVLAGF
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: TPLMKQFFAAKSDYPDLLLFFRMGDFYELFYDDARKAARLLDITLTQRGSSGGAPIPMAGVPVHAYEGYLARLVALGESVAICEQIGDPALAKGLVERKVVRIVTPGTVTD
type: DOMAIN
name: DNA_mismatch_repair_MutS-lik_N
description: DNA mismatch repair protein MutS-like, N-terminal

phrase: GYDAELDELRRLSTNADQFLIDLEQRERASSGIATLKVGYNRVHGYYIEISKGQAEKAPLHYSRRQTLTNAERYITEELKSFEDKVLSARE
type: DOMAIN
name: DNA_mismatch_repair_MutS_clamp
description: DNA mismatch repair protein MutS, clamp

phrase: LLMAISRSKHGYGLAWADLAGGRFLVNEVDSADALEAEIARLEPAELLVPDEDNWPDFLRGRTGVRRRPPWLFDADSGRRQLLAFFKLHDLSGFGIDDKPCATAAAGALLGYVEETQKQRLPH
type: DOMAIN
name: DNA_mmatch_repair_MutS_con_dom
description: DNA mismatch repair protein MutS, connector domain

phrase: SLVLMDEIGRGTSTYD
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: RRMLVITGPNMGGKSTYMRQNALIVLLAHIGSYVPASRAVIGPIDRILTRIGAGDDLARGQSTFMVEMAETSYILHHATPQSLVLMDEIGRGTSTYDGLALADAVARHLAHTNRCYTLFATHYFELTALADESHAGGASGIANVHLDAVEHGERLVFMHAVKDGPANRSFGLQVAALAGLPKAAVTQARRRL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: DTRNTLLGVLDSTVTPMGGRLLRRWLHRPLRLRDVLLQRHHAVGTLIDAGADADLREAFRALGDLERILTRVALRSARPRDFSTLRDGLALLPKVRTILAPLDSPRLQTLHAELGEHDATAHLLISAVAETPPLKLSDGGVIATGYDAELDELRRLSTNADQFLIDLEQRERASSGIATLKVGYNRVHGYYIEISKGQAEKAPLHYSRRQTLTNAERYITEELKSFEDKVLSARERSLSREKLLYEGLLDALGTELEGLKRCAGALSELDVLAGFAERAQALDWSQPELDHAPCLRIEHGRHPVVEA
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core
Protein sequence:
MRAFLEGMGEKPFRALQLIQWIHTKGLTQFSEMSNLSKSLRESLANIATIQAPEIIHQNIATDGTYKWLIRLSDGNCIESVFIPEKTRGTLCISSQVGCILNCDFCSTGKQGFSRNLTTAEIIGQLWLAVRVLSTNNKEHDRAITNVVFMGMGEPLLNLDQVIPAINLMRHDNAYGLSKYRITVSTAGVIPGMQTLRLATDTALALSLHATNDTLRNELVPLNKKYPLAALMIACKDYFKNEPRRSIIMEYVMLAGVNDTIAHAKELICLLQDVPAKVNLIPFNTFPNTTYQQSDPETIHRFQEKLISAGIFTSIRRTRGDDITAACGQLVGDVQDRTKRQQRERERIEQSSRERV

Annotated regions:
phrase: MRAFLEGMGEKPFRALQLIQWIHTKGLTQFSEMSNLSKSLRESLANIAT
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: SSQVGCILNCDFCSTGKQGFSRNLTTAEIIGQLWLAVRVLSTNNKEHDRAITNVVFMGMGEPLLNLDQVIPAINLMRHDNAYGLSKYRITVSTAGVIPGMQTLRLATDTALALSLHATNDTLRNELVPLNKKYPLAALMIACKDYFKNEPRRSIIMEYVMLAGVND
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: EKTRGTLCISSQVGCILNCDFCSTGKQGFSRNLTTAEIIGQLWLAVRVLSTNNKEHDRAITNVVFMGMGEPLLNLDQVIPAINLMRHDNAYGLSKYRITVSTAGVIPGMQTLRLATDTALALSLHATNDTLRNELVPLNKKYPLAALMIACKDYFKNEPRRSIIMEYVMLAGVNDTIAHAKELICLLQDVPAKVNLIPFNTFPNTTYQQSDPETIHRFQEKLISAGIFTSIRRTRGD
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MRAISSLAGPRALAAFGRNDIRGTYRDPLLVMLVIAPVIWTTGVALLTPLFTEMLARRYGFDLVGYYPLILTAFLLLTSIIVAGALAAFLVLDDVDAGTMTALRVTPVPLSVFFGYRAATVMVVTTIYVVATMSCSGILEPGLVSSLIPIGLVAGLSAVVTLLLILAVANNKIQGLAMVRALGMLIAGLPCLPWFISSNWNLAFGVLPPYWAAKAFWVASDHGTWWPYLVGGAVYNLAIVWVLFRRFRAKHA

Annotated regions:
Protein sequence:
MATHTISRSILCRPAKSLSFLFTRSFASSAPLAKSPASSLLSRSRPLVAAFSSVFRGGLVSVKGLSTQATSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVVEPPQGEPTRDEIIDSYIKTLAQIVGSEDEARMKIYSVSTRCYYAFGALVSEDLSHKLKELSNVRWVLPDSYLDVRNKDYGGEPFIDGKAVPYDPKYHEEWIRNNARANERNRRNDRPRNNDRSRNFERRRENMAGGPPPQRPPMGGPPPPPHIGGSAPPPPHMGGSAPPPPHMGQNYGPPPPNNMGGPRHPPPYGAPPQNNMGGPRPPQNYGGTPPPNYGGAPPANNMGGAPPPNYGGGPPPQYGAVPPPQYGGAPPQNNNYQQQGSGMQQPQYQNNYPPNRDGSGNPYQG

Annotated regions:
phrase: FEHWLVVVEPPQGEPTRDEIIDSYIKTLAQIVGSEDEARMKIYSVSTRCYYAFGALVSEDLSHKLKELSNVRWVLPDSYLDVRNKDYGGEP
type: DOMAIN
name: MORF/ORRM1/DAG-like_MORF
description: MORF/ORRM1/DAG-like, MORF domain
Protein sequence:
MNGTEGPNFYIPMSNITGVVRSPFEYPQYYLAEPWAYTILAAYMFTLILLGFPVNFLTLYVTIEHKKLRTPLNYILLNLAVANLFMVFGGFTTTVYTSMHGYFVFGETGCNLEGYFATLGGEISLWSLVVLAIERWVVVCKPMSNFRFGENHAIMGLAFTWIMANSCAMPPLFGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFIVHFSVPLTIISFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVVIMVIAFLVCWVPYASVAWYIFTHQGSTFGPVFMTVPSFFAKSSAIYNPLIYICLNSQFRNCMITTLFCGKNPFQEEEGASTTASKTEASSVSSVSPA

Annotated regions:
phrase: NGTEGPNFYIPMSNITGVVRSPFEYPQYYLAEPWA
type: DOMAIN
name: Rhodopsin_N
description: Rhodopsin, N-terminal

phrase: VNFLTLYVTIEHKKLRTPLNYILLNLAVANLFMVFGGFTTTVYTSMHGYFVFGETGCNLEGYFATLGGEISLWSLVVLAIERWVVVCKPMSNFRFGENHAIMGLAFTWIMANSCAMPPLFGWSRYIPEGMQCSCGVDYYTLKPEVNNESFVIYMFIVHFSVPLTIISFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVVIMVIAFLVCWVPYASVAWYIFTHQGSTFGPVFMTVPSFFAKSSAIYNPLI
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM

phrase: VPSFFAKSSAIYNPLI
type: BINDING_SITE
name: Retinal_BS
description: Visual pigments (opsins) retinal binding site
Protein sequence:
MTKSNGHNATMIVTGACDFSSSFSLASSSSSTVSVTTFNISSLSSNPNIINSSSTLFRSLSFSLIRHRSSYSRRSLRRLSIHTVHGNKTQFFSHSSTRTPPLFTANSTAQRSGTFVEHLTGITESEEGISEANGFGDVESARNDIRNVATRRIETEFEVRELEELPEEWRRSKLAWLCKEVPTHKAVTLVRLLNAQKKWVRQEDATYISVHCMRIRENETGFRVYRWMTQQNWYRFDFGLTTKLAEYLGKERKFTKCREVFDDVLNQGRVPSESTFHILVVAYLSSLSVEGCLEEACSVYNRMIQLGGYKPRLSLHNSLFRALVSKQGGILNDQLKQAEFIFHNVVTTGLEVQKDIYSGLIWLHSCQDEVDIGRINSLREEMKKAGFQESKEVVVSLLRAYAKEGGVEEVERTWLELLDLDCGIPSQAFVYKIEAYSKVGDFAKAMEIFREMEKHIGGATMSGYHKIIEVLCKVQQVELVETLMKEFEESGKKPLLPSFIEIAKMYFDLGLHEKLEMAFVQCLEKCQPSQPIYNIYLDSLTKIGNLEKAGDVFNEMKNNGTINVSARSCNSLLKGYLDCGKQVQAERIYDLMRMKKYEIEPPLMEKLDYILSLKKKEVKKRPFSMKLSKDQREVLVGLLLGGLQIESDKEKKSHMIKFEFRENSQAHLVLKQNIHDQFREWLHPLSNFQEDIIPFEFYSVPHSYFGFYAEHYWPKGQPEIPKLIHRWLSPHSLAYWYMYSGVKTSSGDIILRLKGSLEGVEKVVKALQ

Annotated regions:
phrase: SQPIYNIYLDSLTKIGNLEKAGDVFNEMKNNGTI
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: IEAYSKVGDFAKAMEIFREME
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: IYNIYLDSLTKIGNLEKAGDVFNEMKNN
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: LSSLSVEGCLEEACSVYNRMIQL
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: SLLRAYAKEGGVEEVERTWLELLDL
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: REVLVGLLLGGLQIESDKEKKSHMIKFEFRENSQAHLVLKQNIHDQFREWLHPLSNFQEDIIPFEFYSVPHSYFGFYAEHYWPKGQPEIPKLIHRWLSPHSLAYWYMYSGVKTSSGDIILRLKGSLEGVEKVVKAL
type: DOMAIN
name: LAGLIDADG_dom
description: Homing endonuclease, LAGLIDADG domain

phrase: SARSCNSLLKGYLDCGKQVQAERIYDLMRMKKYE
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: IYNIYLDSLTKIGNLEKAGDVFNEMKNN
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: IEAYSKVGDFAKAMEIFREME
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat
Protein sequence:
MTDKIRSVQGRVVSDKMEKSFVVAIERKVKHPLYGKFIRRTTKLHVHDENNEAKLGDLVEVRECRPISKTKSWTLVRVVEKAVIA

Annotated regions:
phrase: GDLVEVRECRPI
type: CONSERVED_SITE
name: Ribosomal_uS17_CS
description: Small ribosomal subunit protein uS17, conserved site
Protein sequence:
MVCFSKYSGITLDMRLILIDWLIEVHYEYECIIDTLCLAIILVDEFVDRIDKIDRKYFQCIGICCMNIATKILEPEHIGSENCNFISASQYTTDVIISYEKNILQTLDFHLVRKTILDSLWSKIKDFSRQKKNMGIFFTIVSMTSDKYKCFPCEKIADGIIKLVDLIDNYPIDSIDYTDEINTDTIMRYLWSQLTICTNKKLDGYTDLIKNLEIDFEFMKKLTSDIILKPKIVLFPSKNLELYTPLRHCFQYNTEDISNITVVKNLGEGTYGTVDLVTLNASKAAIKTQKELNEEISPDMVNEIVFLRIMDHPNIIKLYGYHLGSQTKLVLEPMESSLRRFIIDDTWNNLNKTLGITNNIFSDNQKIFYIKQLLEGLKYLHENRIVHGDLTCSNILISKSKLKICDFGSSKIIHPKNKLNYKTSKCSLWYRAIELLLEQNYDEKIDVWSVACICGFILGDKLFDGDNESEIIENIFSHLGTPDPIIFESKTSINIPTKKYKFVGFEKLEEKYPDITSIIYRMLSYDSKMRISASQTLEEFNKFNSD

Annotated regions:
phrase: TVVKNLGEGTYGTVDLVTLNASKAAIKTQKELNEEISPDMVNEIVFLRIMDHPNIIKLYGYHLGSQTKLVLEPMESSLRRFIIDDTWNNLNKTLGITNNIFSDNQKIFYIKQLLEGLKYLHENRIVHGDLTCSNILISKSKLKICDFGSSKIIHPKNKLNYKTSKCSLWYRAIELLLEQNYDEKIDVWSVACICGFILGDKLFDGDNESEIIENIFSHLGTPDPIIFESKTSINIPTKKYKFVGFEKLEEKYPDITSIIYRMLSYDSKMRISASQTL
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: ITVVKNLGEGTYGTVDLVTLNASKAAIKTQKELNEEISPDMVNEIVFLRIMDHPNIIKLYGYHLGSQTKLVLEPMESSLRRFIIDDTWNNLNKTLGITNNIFSDNQKIFYIKQLLEGLKYLHENRIVHGDLTCSNILISKSKLKICDFGSSKIIHPKNKLNYKTSKCSLWYRAIELLLEQNYDEKIDVWSVACICGFILGDKLFDGDNESEIIENIFSHLGTPDPIIFESKTSINIPTKKYKFVGFEKLEEKYPDITSIIYRMLSYDSKMRISASQTLEEFNKF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: DWLIEVHYEYECIIDTLCLAIILVDEFVDRIDKIDRKYFQCIGICCMNIATKILEPEHIGSENCNFISASQYTTDVIISYEKNIL
type: DOMAIN
name: Cyclin-like_dom
description: Cyclin-like domain

phrase: IVHGDLTCSNIL
type: ACTIVE_SITE
name: Tyr_kinase_AS
description: Tyrosine-protein kinase, active site

phrase: SKYSGITLDMRLILIDWLIEVHYEYECIIDTLCLAIILVDEFVDRIDKIDRKYFQCIGICCMNIATKILEPEHIGSENCNFISASQYTTDVIISYEKNILQTLDFH
type: DOMAIN
name: Cyclin_N
description: Cyclin, N-terminal
Protein sequence:
MNNIRKTHPLMKIVNSSFIDLPAPSNISSWWNFGSLLGICLIMQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGLYYGSYMYLETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIVAALAGVHLLFLHETGSNNPSGLNSDTDKIPFHPYYTIKDILGVLILIATLSSLVLFSPDMLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSIAILTIIPLLHMAKQRSMMFRPMSQCLFWILVADLLTLTWIGGQPVEHPFVIIGQLASVIYFMLILLIMPITSMIENQLLKW

Annotated regions:
phrase: PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSIAILTIIPLLHMAKQRSMMFRPMSQCLFWILVADLLTLTWIGGQPVEHPFVIIGQLASVIY
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: IDLPAPSNISSWWNFGSLLGICLIMQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGLYYGSYMYLETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIVAALAGVHLLFLHET
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: PLMKIVNSSFIDLPAPSNISSWWNFGSLLGICLIMQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGLYYGSYMYLETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIVAALAGVHLLFLHETGS
type: DOMAIN
name: Cytochrome_b_N_euk/bac
description: Cytochrome b/b6, N-terminal domain, eukaryotic/bacterial

phrase: NPSGLNSDTDKIPFHPYYTIKDILGVLILIATLSSLVLFSPDMLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSIAILTIIPLLHMAKQRSMMFRPMSQCLFWILVADLLTLTWIGGQPVEHPFVIIGQL
type: DOMAIN
name: Cytochrome_b_C_euk/bac
description: Cytochrome b/b6, C-terminal domain, eukaryotic/bacterial

phrase: GLNSDTDKIPFHPYYTIKDILGVLILIATLSSLVLFSPDMLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSIAILTIIPLLHMAKQRSMMFRPMSQCLFWILVADLLTLTWIGGQPVEHPFVIIGQLASVIYFMLILLIMPITSMIENQLLK
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: MNNIRKTHPLMKIVNSSFIDLPAPSNISSWWNFGSLLGICLIMQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWLIRYLHANGASMFFICLFLHVGRGLYYGSYMYLETWNIGVLLLFAVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIVAALAGVHLLFLHETGSNNP
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain
Protein sequence:
MPIALAGGGFFRVSAPPARTPYPEAMSYAEVLGMTILDASPDLTRVALTVTEAGLNMHGTAHGGLIFSLADEAFAVISNLDAQAVAAETHMSFFRAAREGERLVAVATPERVGRTLATYRIEVRRGEEGEVLALFLGTVSRREKQS

Annotated regions:
phrase: AEVLGMTILDASPDLTRVALTVTEAGLNMHGTAHGGLIFSLADEAFAVISNLDAQAVAAETHMSFFRAAREGERLVAVATPERVGRTLATYRIEVRRGEEGEVLALFLGT
type: DOMAIN
name: PAAI_dom
description: Phenylacetic acid degradation-related domain

phrase: HGTAHGGLIFSLADEAFAVISNLDAQAVAAETHMSFFRAAREGERLVAVATPERVGRTLATYRIEVRRGEEGE
type: DOMAIN
name: Thioestr_dom
description: Thioesterase domain