nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSNLSARTGRDHQRYDNNFRLVSGCIPYRLVKDEEEDSTSVDFENKLQVLMISSPNRHDLVFPKGGWEDDETVLEAASREAMEEAGVKGILREDPLGVWEFRSKSSSVEADCCLGGGCKGYMFALEVKEELAIWPEQDDRERRWLNVKEALELCRYEWMQSALEEFLRVMAEEGSTKEDSLAISSISNRGERQIDPRYCFVV

Annotated regions:
phrase: NFRLVSGCIPYRLVKDEEEDSTSVDFENKLQVLMISSPNRHDLVFPKGGWEDDETVLEAASREAMEEAGVKGILREDPLGVWEFRSKSSSVEADCCLGGGCKGYMFALEVKEELAIWPEQDDRERRWLNVKEALELCRYEWMQSALEEF
type: DOMAIN
name: NUDIX_hydrolase_dom
description: NUDIX hydrolase domain

phrase: LVSGCIPYRLVKDEEEDSTSVDFENKLQVLMISSPNRHDLVFPKGGWEDDETVLEAASREAMEEAGVKGILREDPLGVWEFRSKSSSVEADCCLGGGCKGYMFALEVKEELAIWPEQDDRERRWLNVKEALELCRYEWMQSALEE
type: DOMAIN
name: DDP-like_NUDIX
description: Diphosphoinositol polyphosphate phosphohydrolase-like, NUDIX domain

phrase: GGWEDDETVLEAASREAMEEA
type: CONSERVED_SITE
name: NUDIX_hydrolase_CS
description: NUDIX hydrolase, conserved site

phrase: ENKLQVLMISSPNRHDLVFPKGGWEDDETVLEAASREAMEEAGVKGILREDPLGVWEFRSKSSSVEADCCLGGGCKGYMFALEVKEELAIWPEQDDRERRWLNVKEALELCRYEWMQSA
type: DOMAIN
name: NUDIX_hydrolase_dom
description: NUDIX hydrolase domain
Protein sequence:
MVLNSNLTTQDKQRIINPIERTNVTQDLSENVILTTVDDLYDWARLSSLWPLLFGTACCFIEFAALIGSRFDFDRFGLIPRSSPRQADLIITAGTITMKMAPQLVRLYEQMPEPKYVIAMGACTITGGMFSVDSPTAVRGVDKLIPVDVYLPGCPPRPEAIIDAIIKLRKKISNESIQERDKIKQTHRYYSTTHNLKPVEEILTGKYLQSDTRSAPPKELAEAIGMPIPPALLTEKAQKEEQTRG

Annotated regions:
phrase: CCFIEFAALIGSRFDFDRFGLIPRSSPRQADLIITAGTITMKMAPQLVRLYEQMPEPKYVIAMGACTITGGMFSVDSPTAVRGVDKLIPVDVYLPGCPPRPEAIIDAIIK
type: DOMAIN
name: NADH_UbQ_OxRdtase-like_20kDa
description: NADH:ubiquinone oxidoreductase-like, 20kDa subunit
Protein sequence:
MTKQYDIAVAGATGAVGETILKVLEERNFPVRNLYPLASSRSAGKKIEFNGSWVEIQDLATFDFSKVQIGLFSPGGSVSREYAPKAAAAGCVVVDNTSEFRYDDDVPLVVPEVNPDAVAGYTQRNIIANPNCSTIQMMVAIKPIHDAVGIKRINVSTYQAVSGSGKEAIEELAGQTRDILNLKPVKTEVYPKQIAFNCIPQIDVFQDNGYTKEEMKMVWETKKILEDESVLVNPTAVRVPVFYGHSEAIHLETDKKITADEAKALFEKTDGIVLMDQHEDGGYPTAVTDAADTDPVYVGRVREDITCDNGLNIWVVADNVRKGAATNTVQIAELLIKDHL

Annotated regions:
phrase: IKPIHDAVGIKRINVSTYQAVSGSGKEAIEELAGQTRDILNLKPVKTEVYPKQIAFNCIPQIDVFQDNGYTKEEMKMVWETKKILEDESVLVNPTAVRVPVFYGHSEAIHLETDKKITADEAKALFEKTDGIVLMDQHEDGGYPTAVTDAADTDPVYVGRVREDITCDNGLNIWVVADNVR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: DIAVAGATGAVGETILKVLEERNFPVRNLYPLASSRSAGKKIEFNGSWVEIQDLATFDFSKVQIGLFSPGGSVSREYAPKAAAAGCVVVDNTSEFRYDDDVPLVVPEVNPDAVAG
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: IAVAGATGAVGETILKVLEERNFPVRNLYPLASSRSAGKKIEFNGSWVEIQDLATFDFSKVQIGLFSPGGSVSREYAPKAAAAGCVVVDNTSEFRYDDDVPLVVPEVNPDAV
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MKIAVLSRNAKLYSTRRLVEAAKTRGHEVRVLDVLRCYMNIASHRPSIHYKGEDLTGFDAVIPRIGASVTFYGTAVLRQFEMIGVYPLSESVAITRSRDKLRSLQLLARKGIGLPVTGFAHAPDEIDDLIKMVGGAPVVIKLLEGTQGIGVVLAENKKAAQSVIEAFMGLKTHILVQEFIKETAGSDIRCFIIGDKVVAAMKRQAPEGEFRSNLHRGGSASLVRITPEERSTAIRAAQTMGLNVAGVDILRSNHGPLVMEVNSSPGLEGIESATGKDVATKVIEFIEKNATRGRTRTRGKG

Annotated regions:
phrase: MKIAVLSRNAKLYSTRRLVEAAKTRGHEVRVLDVLRCYMNIASHRPSIHYKGEDLTGFDAVIPRIGASVTFYGTAVLRQFEMIGVYPLSESVA
type: DOMAIN
name: Rimk_N
description: RimK, preATP-grasp domain

phrase: LQLLARKGIGLPVTGFAHAPDEIDDLIKMVGGAPVVIKLLEGTQGIGVVLAENKKAAQSVIEAFMGLKTHILVQEFIKETAGSDIRCFIIGDKVVAAMKRQAPEGEFRSNLHRGGSASLVRITPEERSTAIRAAQTMGLNVAGVDILRSNHGPLVMEVNSSPGLEGIESATGKDVATKVIEFI
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold

phrase: RDKLRSLQLLARKGIGLPVTGFAHAPDEIDDLIKMVGGAPVVIKLLEGTQGIGVVLAENKKAAQSVIEAFMGLKTHILVQEFIKETAGSDIRCFIIGDKVVAAMKRQAPEGEFRSNLHRGGSASLVRITPEERSTAIRAAQTMGLNVAGVDILRSNHGPLVMEVNSSPGLEGIESATGKDVATKVIEF
type: DOMAIN
name: ATP-grasp_RimK-type
description: ATP-grasp fold, RimK-type
Protein sequence:
MYDYIKGQLTKITAKYIVVEANGLGYMITVANPYSFTDCVNQQVTIYLHQVIREDAQLLFGFHSEEEKDVFLKLISVSGIGPTTALAIVAVDDNRGLVNAIDNSDITYLMRFPKIGKKTAQQMVLDLAGKFVEAPKEESSKLPKAKHQENEQLDEAIEALLALGYKATELKKIRAFFEGTSETAEQYIKSALKMLMKG

Annotated regions:
phrase: MYDYIKGQLTKITAKYIVVEANGLGYMITVANPYSFTDCVNQQVTIYLHQVIREDAQLLF
type: DOMAIN
name: DNA_helicase_Holl-junc_RuvA_I
description: DNA helicase, Holliday junction RuvA type, domain I, bacterial

phrase: LDEAIEALLALGYKATELKKIRAFFEGTSETAEQYIKSAL
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal

phrase: LKLISVSGIGPTTALAIVA
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: TYLMRFPKIGKKTAQQMVL
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: LDEAIEALLALGYKATELKKIRAFFEGTSETAEQYIKSALKML
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal
Protein sequence:
MTKLLVAKVLCMVGVFFFMLLGSLLPVKVIEADLEKAHRSKKVLSLCNTFGGGVFLATCFNALLPAVRDKLQQVLSLGHISTDYPLAETLMMVGFFLTVFVEQLVLTFRRERPPFIDLETFNAGSDAGSDSEYESPFVGVGNRSHSLYPEPTAHTHGAGLRLRELGRPGPLRLLSLVFALSAHSVFEGLALGLQEEGERVVSLFVGVAIHETLVAVALGISMARSAVPLRDAAKLAVTVSAMIPVGIGLGLGIESARSVASSVASALLQGLAGGTFLFVTFLEILAKELEERSEQLLKVLFLVLGYAVLAGMVFLKW

Annotated regions:
Protein sequence:
MIDIILPDGSVKQYKIGVTGQEIIQSLSISLFKKTIAVAVNNELMDLYIPIINTATVKAITIDSVQGIEILRHDTAHILAQAVKKLFPDTQVVIGPVIKDGFYYDFARDKPFTSKDLEIIEQEMQDIITKNDLIQREVWLRAKAIEFFKQQKEFYKVKLIEEIPESEEISIYRQGNFVDLCRGPHSPSTGYCAKYFKLTKVSGAYWRGNSKNESLQRIYGTAWGKKSDLDSYLHRLSEAQKRDHRKLGRELELFHFQDEAQGMPFWHSKGWTIFKIIKDYISCQIQRAGYIEVNTPMVLNQKLWEKSGHWEKFRENMFTLDTNAAEQDHNLIKDSIETKCALALKPMNCPGHIQIFNYTIKSYRDLPLRMAEFGSCHRYEPSGALYGLMRVRSFVQDDAHIFCTEDQITDETIKFCHLLKQVYQDFGFPEVKIKFSDRPEKRAGTDKIWDKAEQALIHAIQTLGEEYTINRGEGAFYGPKLEFILTDAIGREWQCGTLQVDFVLPERLNASYISSEGSKKRPVILHRAILGSFERFIGILIEHYSGKLPIWLAPIQVAVVSITDEAVNYAKQLHQELIDNNIRSTLDISNQKINYKIRNFFTAKVPLIAILGKKESESGKIAIRTLGSQEQHVISSSELIAHIRKNKK

Annotated regions:
phrase: MIDIILPDGSVKQYKIGVTGQEIIQSLSISLFKKTIAVAVNNELMDLYIPIINTATVKAI
type: DOMAIN
name: TGS
description: TGS

phrase: ISIYRQGNFVDLCRGPHSPSTGYCAKYFKLTKVSGAYWRGNSKNESLQRI
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD

phrase: KCALALKPMNCPGHIQIFNYTIKSYRDLPLRMAEFGSCHRYEPSGALYGLMRVRSFVQDDAHIFCTEDQITDETIKFCHLLKQVYQDFGFPEVKIKFSDRPEKRAGTDKIWDKAEQALIHAIQTLGEEYTINRGEGAFYGPKLEFILTDAIGREWQCGTLQVDFVLPERLNASYISSEGSKKRPVILHRAILGSFERFIGILIEH
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: DHRKLGRELELFHFQDEAQGMPFWHSKGWTIFKIIKDYISCQIQRAGYIEVNTPMVLNQKLWEKSGHWEKFRENMFTLDTNAAEQDHNLIKDSIETKCALALKPMNCPGHIQIFNYTIKSYRDLPLRMAEFGSCHRYEPSGALYGLMRVRSFVQDDAHIFCTEDQITDETIKFCHLLKQVYQDFGFPEVKIKFSDRPEKRAGTDKIWDKAEQALIHAIQTLGEEYTINRGEGAFYGPKLEFILTDAIGREWQCGTLQVDFVLPERLNASYISSEGSKKRPVILHRAILGSFERFIGILIEHYSGKLPIWLA
type: DOMAIN
name: ThrRS_core
description: Threonine-tRNA ligase catalytic core domain

phrase: QVAVVSITDEAVNYAKQLHQELIDNNIRSTLDISNQKINYKIRNFFTAKVPLIAILGKKESESGKIAIRTLGSQEQHVISSSELIAHIR
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: DHRKLGRELELFHFQDEAQGMPFWHSKGWTIFKIIKDYISCQIQRAGYIEVNTPMVLNQKLWEKSGHWEKFRENMFTLDTNAAEQDHNLIKDSIETKCALALKPMNCPGHIQIFNYTIKSYRDLPLRMAEFGSCHRYEPSGALYGLMRVRSFVQDDAHIFCTEDQITDETIKFCHLLKQVYQDFGFPEVKIKFSDRPEKRAGTDKIWDKAEQALIHAIQTLGEEYTINRGEGAFYGPKLEFILTDAIGREWQCGTLQVDFVLPERLNASYISSEGSKKRPVILHRAILGSFERFIGILIEHYSGKL
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: ISIYRQGNFVDLCRGPHSPSTGYCAKYFKLTKVSGAYWRGNSKNESLQRI
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD

phrase: PIQVAVVSITDEAVNYAKQLHQELIDNNIRSTLDISNQKINYKIRNFFTAKVPLIAILGKKESESGKIAIRTLGSQEQHVISSSELIAHI
type: DOMAIN
name: ThrRS_anticodon
description: Threonine-tRNA ligase, class IIa, anticodon-binding domain
Protein sequence:
MPVLVVNVDHVATLRQQRKGKEPDPLTAAHLVELAGARGIIVHLREDRRHIQDHDVELMARTLKTRLHLEMAATEEMQAIALARQPYMVCLVPEKREELTTEGGLAVAGREAFLKDYLAPIHARGILSSLFIEADEAQVRAAAAIGCPYIELHTGHFADAPTRAAQRAERDKIVRAIGLARSLGLGVNLGHGLNYDNIYEFADVPGISEFSIGHSIVARAVFTGFERAVADMAAIIARFPA

Annotated regions:
Protein sequence:
MSDHDYDVVIIGGGPAGSTMASYLAKAGVKCAVFEKELFEREHVGESLVPATTPVLLEIGVMEKIEKANFPKKFGAAWTSADSGPEDKMGFQGLDHDFRSAEILFNERKQEGVDRDFTFHVDRGKFDRILLEHAGSLGAKVFQGVEIADVEFLSPGNVIVNAKLGKRSVEIKAKMVVDASGRNVLLGRRLGLREKDPVFNQFAIHSWFDNFDRKSATQSPDKVDYIFIHFLPMTNTWVWQIPITETITSVGVVTQKQNYTNSDLTYEEFFWEAVKTRENLHDALKASEQVRPFKKEADYSYGMKEVCGDSFVLIGDAARFVDPIFSSGVSVALNSARIASGDIIEAVKNNDFSKSSFTHYEGMIRNGIKNWYEFITLYYRLNILFTAFVQDPRYRLDILQLLQGDVYSGKRLEVLDKMREIIAAVESDPEHLWHKYLGDMQVPTAKPAF

Annotated regions:
phrase: DYDVVIIGGGPAGSTMASYLAKAGVKCAVFEKELFEREHVGESLVPATTPVLLEIGVMEKIEKANFPKKFGAAWTSADSGPEDKMGFQGLDHDFRSAEILFNERKQEGVDRDFTFHVDRGKFDRILLEHAGSLGAKVFQGVEIADVEFLSPGNVIVNAKLGKRSVEIKAKMVVDASGRNVLLGRRLGLREKDPVFNQFAIHSWFDNFDRKSATQSPDKVDYIFIHFLPMTNTWVWQIPITETITSVGVVTQKQNYTNSDLTYEEFFWEAVKTRENLHDALKASEQVRPFKKEADYSYGMKEVCGDSFVLIGDAARFVDPIFSSGVSVALNSA
type: DOMAIN
name: FAD-bd
description: FAD-binding domain
Protein sequence:
MYIGAFQDTLFVDMLEYFGWVTVGKEYLDIYRPNGVPVAPNAVAASISGKEEMKQDNQTSTDSMSTSTQQETDASNEDIERAMDTDNGLDKAMSGGQGVFGTEEDDSSTKDASKPEEADPFLVEFLGEDDPRKPWNWSFSKKTFVIVQLMVLTCINYMGSSIYTPGQEQIQHEFHVGHVVGTLNLSMYVLGYAIGPIIFSPLSEVSSIGRMPLYLWTFILFTILQVACALVRNIAGLVILRFITGILCSPVLATGGASVGDVCFPRYVPRFLGAWAVGAVAAPVMAPILGAAMVVAKDWRWIFWLMLFMCGATLLSIIFFFPETSHECILHRRAKRLRKLTGDDRYYTKKEKQEEALPVSVFIKNTLWRPIKMIALEPIILAFDVYIALCYGAFYLFFEAFPIVFAGIYHFTLVEVGLAFLGFCVGCVFAYTALIIFQEKVIRKKFLEGKFRPELFLILAMCLGWCLPFSLFFFGWTARIHWILPIIAELFFVLSVFNLFQATFSYLAVCYPEYVASVFAGNGLCRGAFAAAFPLFGKAMYDRLSTKKYPVAWGSTLIGFITVVLSLIPFVLYKYGPALRARSRFSPDS

Annotated regions:
phrase: VIVQLMVLTCINYMGSSIYTPGQEQIQHEFHVGHVVGTLNLSMYVLGYAIGPIIFSPLSEVSSIGRMPLYLWTFILFTILQVACALVRNIAGLVILRFITGILCSPVLATGGASVGDVCFPRYVPRFLGAWAVGAVAAPVMAPILGAAMVVAKDWRWIFWLMLFMCGATLLSIIFFFPETSHECILHRRAKRLRKLTGDDRYYTKKEKQEEALPVSVFIKNTLWRPIKMIALEPIILAFDVYIALCYGAFYLFFEAFPIVFAGIYHFTLVEVGLAFLGFCVGCVFAYTALIIFQEKVIRKKFLEGKFRPELFLILAMCLGWCLPFSLFFFGWTARIHWILPIIAELFFVLSVFNLFQATFSYLAVCYPEYVASVFAGNGLCRGAFAAAFPLFGKAMYDRLSTKKYPVAWGSTLIGFITVVLSLIPFVLYKYGPAL
type: DOMAIN
name: MFS_dom
description: Major facilitator superfamily domain
Protein sequence:
MSRIGKIPVTVPAGVDVTISGQDVTVKGPKGTLALTISEPIAIEKAEDGSLSVTRPDDERRSRALHGLSRTLVANIITGVTEGYTKKMEIHGVGYRVALKGKDLEFALGFSHPVPIEAPEGITFVVESPTRFSVSGIDKQKVGQISANIRRLRRPDPYKGKGVRYEGEQIRRKVGKTGK

Annotated regions:
phrase: PDPYKGKG
type: CONSERVED_SITE
name: Ribosomal_uL6_CS
description: Large ribosomal subunit protein uL6, conserved site

phrase: GVGYRVALKGKDLEFALGFSHPVPIEAPEGITFVVESPTRFSVSGIDKQKVGQISANIRRLRRPDPYKGKGVR
type: DOMAIN
name: Ribosomal_uL6_a/b-dom
description: Large ribosomal subunit protein uL6, alpha-beta domain

phrase: VPAGVDVTISGQDVTVKGPKGTLALTISEPIAIEKAEDGSLSVTRPDDERRSRALHGLSRTLVANIITGVTE
type: DOMAIN
name: Ribosomal_uL6_a/b-dom
description: Large ribosomal subunit protein uL6, alpha-beta domain
Protein sequence:
MSPQTETKASVGFQAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVPGEESQFIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPVAYVKTFQGPPHGIQVERDKLXKYGRPLLGCTIKPKXGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMXXXXXXLFCAEAIYKAQAETGEXXXXYXXXXXXXCEEMIKRAVFPRELGVPIIMHDYLRGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGIHFRVLAKALRMSGGDHIHSGTVVGKLEGERDITLGFVDLLRDDFIEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNEIIREASKWSPELAAACEIWKEIKFEYAAMDTL

Annotated regions:
phrase: GLDFTKDD
type: ACTIVE_SITE
name: RuBisCo_large_chain_AS
description: Ribulose bisphosphate carboxylase, large chain, active site

phrase: YYTPDYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEPVPGEESQFIAYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPVA
type: DOMAIN
name: RuBisCO_lsu_fd_N
description: Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal

phrase: GIQVERDKLXKYGRPLLGCTIKPKXGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMXXXXXXLFCAEAIYKAQAETGEXXXXYXXXXXXXCEEMIKRAVFPRELGVPIIMHDYLRGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGIHFRVLAKALRMSGGDHIHSGTVVGKLEGERDITLGFVDLLRDDFIEKDRSRGIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNEIIREASKWSPELAAACEI
type: DOMAIN
name: RuBisCO_lsu_C
description: Ribulose bisphosphate carboxylase, large subunit, C-terminal
Protein sequence:
MELKIGRAIISHALKDLDEYSDVDVAIVGAGPAGLTAARYLAEKGLKVVVYERRFSFGGGIGPGGNMLPKIVVQEEAVPILRDFKVRYKPAEDGLYTVDPAELIAKLAAGAVDAGAKIILGVHVDDVIFRGDPPRVTGLLWIWTPIQMSGMHVDPLYTQAKAVIDATGHDAEVVSVAARKVPELGIQVVGEKSAWSEVSEKLVVEHTGRVAPGLYVAGIAVCAVYGLPRMGPIFGGMLMSGKKVAEVVYKDLMAEAHAVRA

Annotated regions:
Protein sequence:
MAGLDREKALDNALAQIDKQFGKGSVMRLGDDTRPPVQAIPTGSIALDVALGIGGLPRGRIIEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAGKLGVDTDGLLVSQPDTGEQALEIADMLVRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTAALANSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRLDVRRIETLKDGTEAVGNRTRVKVVKNKVAPPFRTAEFDIVYGGGISREGSLIDMGVEHGIIRKSGAWYTYDGDQLGQGKENARSFLRDNPDLANEIEKKIKEKLGILPSLESDAVAPVPVDL

Annotated regions:
phrase: GVMFGSPETTTGGKALKFYASVRLDVRRIETLKDGTEAVGNRTRVKVVKNKVAPPFRTAEFDIVYGGGISREG
type: DOMAIN
name: RecA_monomer-monomer_interface
description: DNA recombination and repair protein RecA, monomer-monomer interface

phrase: RGRIIEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAGKLGVDTDGLLVSQPDTGEQALEIADMLVRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTAALANSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRLDVRRI
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: GSLIDMGVEHGIIRKSGAWYTYDGDQLGQGKENARSFLRDNPDLANEIEKKIKEKL
type: DOMAIN
name: RecA-like_C
description: RecA-like, C-terminal

phrase: KALDNALAQIDKQFGKGSVMRLGDDTRPPVQAIPTGSIALDVALGIGGLPRGRIIEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAGKLGVDTDGLLVSQPDTGEQALEIADMLVRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTAALANSGTTAIFINQLREKIGVMFGSPETTTGGKALKFYASVRLDVRRIETLKDGTEAVGNRTRVKVVKNKVAPPFRTAEFDIVYGGGI
type: DOMAIN
name: RecA-like_N
description: RecA-like, N-terminal

phrase: PVQAIPTGSIALDVALGIGGLPRGRIIEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAGKLGVDTDGLLVSQPDTGEQALEIADMLVRSGALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLMSQALRKMTAALANSGTTAIFINQ
type: DOMAIN
name: RecA_ATP-bd
description: DNA recombination and repair protein RecA-like, ATP-binding domain

phrase: ALKFYASV
type: CONSERVED_SITE
name: DNA_recomb/repair_RecA_CS
description: DNA recombination/repair protein RecA, conserved site
Protein sequence:
MPKYIFVSGGVSSSLGKGISAASLGRLLESRGRSVTMLKCDPYINVDPGTMNPYQHGEVFVTDDGAETDLDFGHYERFLDVDMRRINNITTGQIYASVIAKERRGDYLGDTVQVIPHITDAIKRQFRAVAKGHDVVIIEIGGTVGDIESLPFLEAARQMKQDVGEENVIYVHVTLVPYLRSSNEIKTKPTQHSVGKLREIGIDPDLIICRCEQPISREIRDKISLFCSVPRKAVIDAPDVASIYEVPALFQKQGVDSLILRRLAIRSSRKDLNQWHKWISRLKSPSGQRATIAVAGKYTDLRDAYKSLQEAIIHAGVHNGAKMDIRYVDVDRADLVQELKKSDGIIIPGGFGDRGVEAKIGVARFERRTKTPFLGICLGMQCAAIEIARNLAKLKNANSTEFDRGTPHPVISMLEGQRSVTQKGGSMRLGAYQCRILAGSQARSIYRRPQTTERHRHRYEFNNRYKQALEKAGLKVVGVEPAQNLVEIVEFQPHPWFIAVQFHPEFKSRPNRPHPLFRAFVGACLRNSRRRRRATGASGSPQHCEVGRRARK

Annotated regions:
phrase: KYIFVSGGVSSSLGKGISAASLGRLLESRGRSVTMLKCDPYINVDPGTMNPYQHGEVFVTDDGAETDLDFGHYERFLDVDMRRINNITTGQIYASVIAKERRGDYLGDTVQVIPHITDAIKRQFRAVAKGHDVVIIEIGGTVGDIESLPFLEAARQMKQDVGEENVIYVHVTLVPYLRSSNEIKTKPTQHSVGKLREIGIDPDLIICRCEQPISREIRDKISLFCSVPRKAVIDAPDVASIYEVPALFQKQGVDSLILRRL
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: KYIFVSGGVSSSLGKGISAASLGRLLESRGRSVTMLKCDPYINVDPGTMNPYQHGEVFVTDDGAETDLDFGHYERFLDVDMRRINNITTGQIYASVIAKERRGDYLGDTVQVIPHITDAIKRQFRAVAKGHDVVIIEIGGTVGDIESLPFLEAARQMKQDVGEENVIYVHVTLVPYLRSSNEIKTKPTQHSVGKLREIGIDPDLIICRCEQPISREIRDKISLFCSVPRKAVIDAPDVASIYEVPALFQKQGVDSLIL
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: LRDAYKSLQEAIIHAGVHNGAKMDIRYVDVDRADLVQELKKSDGIIIPGGFGDRGVEAKIGVARFERRTKTPFLGICLGMQCAAIEIARNLAKLKNANSTEFDRGTPHPVISMLEGQRSVTQKGGSMRLGAYQCRILAGSQARSIYRRPQTTERHRHRYEFNNRYKQALEKAGLKVVGVEPAQNLVEIVEFQPHPWFIAVQFHPEFKSRPNRPHPLFRAF
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: TIAVAGKYTDLRDAYKSLQEAIIHAGVHNGAKMDIRYVDVDRADLVQELKKSDGIIIPGGFGDRGVEAKIGVARFERRTKTPFLGICLGMQCAAIEIARNLAKLKNANSTEFDRGTPHPVISMLEGQRSVTQKGGSMRLGAYQCRILAGSQARSIYRRPQTTERHRHRYEFNNRYKQALEKAGLKVVGVEPAQNLVEIVEFQPHPWFIAVQFHPEFKSRPNRPHPLFRAF
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain
Protein sequence:
MTEQLQMTRRTMLAGAALAGAVAPLLHTAQAHAAGAAAAAGAAPVDISTLPRVKVDLVKPPFVHAHDQVAKTGPRVVEFTMTIEEKKLVIDREGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPDTNTLLHNIDFHAATGALGGGALTQVNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLPRDGLKDEKGQPLTYDKIYYVGEQDFYVPKDEAGNYKKYETPGEAYEDAVKAMRTLTPTHIVFNGAVGALTGDHALTAAVGERVLVVHSQANRDTRPHLIGGHGDYVWATGKFRNPPDLDQETWLIPGGTAGAAFYTFRQPGVYAYVNHNLIEAFELGAAGHFKVTGEWNDDLMTSVVKPASM

Annotated regions:
phrase: EGTEIHAMTFNGSVPGPLMVVHENDYVELRLINPDTNTLLHNIDFHAATGALGGGALTQVNPGEETTLRFKATKPGVFVYHCAPEGMVPWHVTSGMNGAIMVLP
type: DOMAIN
name: Cu-oxidase-like_N
description: Multicopper oxidase-like, N-terminal

phrase: YYVGEQDFYVPKDEAGNYKKYETPGEAYEDAVKAMRTLTPTHIVFNGAVGALTGDHALTAAVGERVLVVHSQANRDTRPHLIGGHGDYVWATGKFRNPPDLDQETWLIPGGTAGAAFYTFRQPGVYAYVNHNLIEAFELGAAGHFKVTGE
type: DOMAIN
name: Cu-oxidase_2nd
description: Multicopper oxidase, second cupredoxin domain

phrase: MTEQLQMTRRTMLAGAALAGAVAPLLHTAQAHAAGAAA
type: CONSERVED_SITE
name: TAT_signal
description: Twin-arginine translocation pathway, signal sequence
Protein sequence:
MHEVDIAVVGAGPAGLFAAYYAGFRGLSVAVVDALPEPGGQITAMYPEKLIHDVAGFPAIKGRDLVANLVAQAAPFAPRYLLGTRAEKLSYADGRPVLGLAGGEQLHCGAVVITGGLGSFTPRPLPVAERFVGTGIIYFVPQPADLTGQDVLIVGGGDSAFDWASTLQPLARSVTLVHRREKFRAHAATVARVHALPVRVVVNAEVTRLHGGGAVTGAEITVRGGAAELLPVDTVVAALGFTADLGPLAEWGLRLDRRHLVVDSTMATNLPRVFAAGDITEYQGKVRLIATGFGEAATAVNNAAVVLDPAAHLFPGHSSDET

Annotated regions:
phrase: DIAVVGAGPAGLFAAYYAGFRGLSVAVVDALPEPGGQITAMYPEKLIHDVAGFPAIKGRDLVANLVAQAAPFAPRYLLGTRAEKLSYADGRPVLGLAGGEQLHCGAVVITGGLGSFTPRPLPVAERFVGTGIIYFVPQPADLTGQDVLIVGGGDSAFDWASTLQPLARSVTLVHRREKFRAHAATVARVHALPVRVVVNAEVTRLHGGGAVTGAEITVRGGAAELLPVDTVVAALGFTADLGPLAEWGLRLDRRHLVVDSTMATNLPRVFAAGDITEYQGKVRLIAT
type: DOMAIN
name: FAD/NAD-binding_dom
description: FAD/NAD(P)-binding domain
Protein sequence:
MAKLALIRLRSGIRARGEVRDTLAMLRLHRINHLVIVDDTPSYRGMIQKVKDYITWGEIDKETLAKLLRKRGRLIGNKPITDEYVKEKLGMTIEEFAEKVVNGEMKLRDLPNIKPVFRLHPPRGGLKGSKKRSFKEGGALGYRGEKINELIERML

Annotated regions:
phrase: TLAMLRLHRINHLVIVDDTPSYRGMIQKVKDY
type: CONSERVED_SITE
name: Ribosomal_uL30_CS
description: Large ribosomal subunit protein uL30, conserved site

phrase: ALIRLRSGIRARGEVRDTLAMLRLHRINHLVIVDDTPSYRGMIQKVKDY
type: DOMAIN
name: Ribosomal_uL30_ferredoxin-like
description: Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain

phrase: LALIRLRSGIRARGEVRDTLAMLRLHRINHLVIVDDTPSYRGMIQKVKDYITWGEIDKETLAKLLRKRGRLIGNKPITDEYVKEKLGMTIEEFAEKVVNGEMKLRDLPNIKPVFRLHPPRGGLKGSKKRSFKEGGALGYRGEKINELIERM
type: DOMAIN
name: Ribosomal_uL30_euk_arc
description: Large ribosomal subunit protein uL30, eukaryotic/archaeal
Protein sequence:
MSIECHNAFILHRRPYRETSQLIDLFCQDVGKVSLVYKGGRSSTRMRRGTAQPFTLLQVSYFGRGSLKTVKSFEAQTQVVPLVGQRLFLAMYINELLYRLLQAETACDGLFECYQQTLLAIAGAVDPQIALRLFELTLIETLGYGVNFSEDIYSGELIESGYEYQYQHQAGFFAKQAIHKQHDVYSGQDILALAQRDFSNQNVLKSAKRFCRQALANLLGGKPLHSRALFTAK

Annotated regions:
phrase: CHNAFILHRRPYRETSQLIDLFCQDVGKVSLVYKGGRSSTRMRRGTAQPFTLLQVSYFGRGSLKTVKSF
type: DOMAIN
name: DNA_rep/recomb_RecO_N
description: DNA replication/recombination mediator RecO, N-terminal
Protein sequence:
MSVKPTLSKPIGGQDASSPAVVMRRLWPYVKPLVWVLVAGVLAMAAVAATEAGIPALLKPLLDHGFGSKGDMTTKLYVPAAVVGLALARAIAQYASGYLLQYVSNRILLDLRIQMFERMIHTGVSFFQRETASTVINAVVFEVNQVLSVLMGVMITLVRDSLTVVFLLGYLFYLNWRLTLIVAILLPCIGWLVGKINRRLRRLNREHQTLTNQLAYIVEETVGGYKVVKVHNGESYEIGRFNELSRKLRGYSMRMTVSGGLAQPLTQFLASIALAVVLTIAVVQSSNDQTTVGGFVAFVTAMLLIISPLKHLMDVNQPLQRGMTAAELIFGLIDEPREPEGGGKPLARASGAIEFSHVSFSYGISRDGRQTLDDVSFTVAPGEMVALAGPSGSGKTTLVNLLPRFFDPSSGTVRVDGVALPEYSLHDLRNQIAMVSQDVVLFNDTIAANVAYGQTPERDGVEAALRAANLWETVTAMPDGIDTLVGDNGMRLSGGQRQRLAIARAIYKDAPILILDEATSALDSESERHVQAALETLMKGRTTLVIAHRLSTIERADRILVLEGGKIVESGSHRELLEQGGLYAHLHRIQFQQDAG

Annotated regions:
phrase: LSGGQRQRLAIARA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: VAGVLAMAAVAATEAGIPALLKPLLDHGFGSKGDMTTKLYVPAAVVGLALARAIAQYASGYLLQYVSNRILLDLRIQMFERMIHTGVSFFQRETASTVINAVVFEVNQVLSVLMGVMITLVRDSLTVVFLLGYLFYLNWRLTLIVAILLPCIGWLVGKINRRLRRLNREHQTLTNQLAYIVEETVGGYKVVKVHNGESYEIGRFNELSRKLRGYSMRMTVSGGLAQPLTQFLASIALAVVLTIAVVQSSNDQTTVGGFVAFVTAMLLIISPLKHLMDVNQPLQ
type: DOMAIN
name: ABC1_TM_dom
description: ABC transporter type 1, transmembrane domain

phrase: AGVLAMAAVAATEAGIPALLKPLLDHGFGSKGDMTTKLYVPAAVVGLALARAIAQYASGYLLQYVSNRILLDLRIQMFERMIHTGVSFFQRETASTVINAVVFEVNQVLSVLMGVMITLVRDSLTVVFLLGYLFYLNWRLTLIVAILLPCIGWLVGKINRRLRRLNREHQTLTNQLAYIVEETVGGYKVVKVHNGESYEIGRFNELSRKLRGYSMRMTVSGGLAQPLTQFLASIALAVVLTIAVVQSSNDQTTVGGFVAFVTAMLLIISP
type: DOMAIN
name: ABC1_TM_dom
description: ABC transporter type 1, transmembrane domain

phrase: PGEMVALAGPSGSGKTTLVNLLPRFFDPSSGTVRVDGVALPEYSLHDLRNQIAMVSQDVVLFNDTIAANVAYGQTPERDGVEAALRAANLWETVTAMPDGIDTLVGDNGMRLSGGQRQRLAIARAIYKDAPILILDEATSALDSESERHVQAALETLMKGRTTLVIAHRLSTIERADRILVLEGG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LDDVSFTVAPGEMVALAGPSGSGKTTLVNLLPRFFDPSSGTVRVDGVALPEYSLHDLRNQIAMVSQDVVLFNDTIAANVAYGQTPERDGVEAALRAANLWETVTAMPDGIDTLVGDNGMRLSGGQRQRLAIARAIYKDAPILILDEAT
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: IEFSHVSFSYGISRDGRQTLDDVSFTVAPGEMVALAGPSGSGKTTLVNLLPRFFDPSSGTVRVDGVALPEYSLHDLRNQIAMVSQDVVLFNDTIAANVAYGQTPERDGVEAALRAANLWETVTAMPDGIDTLVGDNGMRLSGGQRQRLAIARAIYKDAPILILDEATSALDSESERHVQAALETLMKGRTTLVIAHRLSTIERADRILVLEGGKIVESGSHRELLEQGGLYAHLHR
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain
Protein sequence:
MEAFVGTGVALITPFKEDLSIDTEALSNLVKYQIENGIEYLVVLGTTAESATLTQDEKELIKKVVKEANAGELPLVLGVGGNNTAGVVEELQIADLDGFDAILSVSPYYNKPTQEGIYRHFEAISKASPLPIILYNVPGRTSSNVLPETINRIARNLKNVIGVKEAAGDIVQAMKMISLVPDDFKVISGDDMITLPMTLAGGKGVISVIGQGLPKEFSNMVRAGLEGKVSEAYQLHYKIAPSIEFIFAEGNPAGIKTLLAKKGIISNTLRLPLVEATETLQSKINSFVDNF

Annotated regions:
phrase: YNVPGRTSSNVLPETINRIARNLKNVIGVKE
type: ACTIVE_SITE
name: Schiff_base-form_aldolases_AS
description: Schiff base-forming aldolase, active site
Protein sequence:
MAKFVFITGGVVSSIGKGIVAASLGRLLKSRGYNVSILKLDPYLNVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFTDTAMSRLNSVTTGSIYQAVINKERRGDYNGGTVQVIPHITGEIRERIHRVAANSNADVVITEIGGTVGDIESLPFLEAIREFSGDVGRNDLAYIHVTLLPFIGTSGELKTKPTQHSVKELRSIGIQPDVLVCRSDRTISEEMKRKIGGFCGVPTRAVIPSLDAESIYAVPLTLEQEGLCREVLDVLDLTDHDSDMAAWQELVHKLRNPGPAVKVALVGKYIQLNDAYLSVVEALRHACIAQDASLDLHWVCAEQIESDGAQALLKGMDAVVVPGGFGNRGVDGKIAAIRWAREQRVPFLGLCLGMQTAVIEWARNQAGLTEATSAELDAGTPHPVIHLLPEQQDVVDLGGTMRLGVYPCRIAPDTLAHRLYGDQVVYERHRHRYEFNNAYRNLFLESGYVVSGSSPDGRLVELIELKGHPFFTACQYHPEFLSRPGRPHPLFQGLIEAAQQRLPSSPVEAIQTQR

Annotated regions:
phrase: NDAYLSVVEALRHACIAQDASLDLHWVCAEQIESDGAQALLKGMDAVVVPGGFGNRGVDGKIAAIRWAREQRVPFLGLCLGMQTAVIEWARNQAGLTEATSAELDAGTPHPVIHLLPEQQDVVDLGGTMRLGVYPCRIAPDTLAHRLYGDQVVYERHRHRYEFNNAYRNLFLESGYVVSGSSPDGRLVELIELKGHPFFTACQYHPEFLSRPGRPHPLFQGLI
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: KFVFITGGVVSSIGKGIVAASLGRLLKSRGYNVSILKLDPYLNVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFTDTAMSRLNSVTTGSIYQAVINKERRGDYNGGTVQVIPHITGEIRERIHRVAANSNADVVITEIGGTVGDIESLPFLEAIREFSGDVGRNDLAYIHVTLLPFIGTSGELKTKPTQHSVKELRSIGIQPDVLVCRSDRTISEEMKRKIGGFCGVPTRAVIPSLDAESIYAVPLTLEQEGLCREVLDVLD
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: KFVFITGGVVSSIGKGIVAASLGRLLKSRGYNVSILKLDPYLNVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFTDTAMSRLNSVTTGSIYQAVINKERRGDYNGGTVQVIPHITGEIRERIHRVAANSNADVVITEIGGTVGDIESLPFLEAIREFSGDVGRNDLAYIHVTLLPFIGTSGELKTKPTQHSVKELRSIGIQPDVLVCRSDRTISEEMKRKIGGFCGVPTRAVIPSLDAESIYAVPLTLEQEGLCREVL
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: VKVALVGKYIQLNDAYLSVVEALRHACIAQDASLDLHWVCAEQIESDGAQALLKGMDAVVVPGGFGNRGVDGKIAAIRWAREQRVPFLGLCLGMQTAVIEWARNQAGLTEATSAELDAGTPHPVIHLLPEQQDVVDLGGTMRLGVYPCRIAPDTLAHRLYGDQVVYERHRHRYEFNNAYRNLFLESGYVVSGSSPDGRLVELIELKGHPFFTACQYHPEFLSRPGRPHPLFQGL
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain