nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MKKIEKTLDEWRSMLDPEQYQVCRLKGTERPFSGKYNSERRDGIYHCICCGLPLFDAQTKFDAGCGWPSFYAPIEDSAMIEIRDTSHGMIRTEVTCARCDAHLGHVFPDGPPPTGLRYCINSVCIDLRPRD

Annotated regions:
phrase: LDPEQYQVCRLKGTERPFSGKYNSERRDGIYHCICCGLPLFDAQTKFDAGCGWPSFYAPIEDSAMIEIRDTSHGMIRTEVTCARCDAHLGHVFPDGPPPTGLRYCINSVCIDL
type: DOMAIN
name: Met_Sox_Rdtase_MsrB_dom
description: Peptide methionine sulphoxide reductase MrsB domain

phrase: TLDEWRSMLDPEQYQVCRLKGTERPFSGKYNSERRDGIYHCICCGLPLFDAQTKFDAGCGWPSFYAPIEDSAMIEIRDTSHGMIRTEVTCARCDAHLGHVFPDGPPPTGLRYCINSVCIDLRP
type: DOMAIN
name: Met_Sox_Rdtase_MsrB_dom
description: Peptide methionine sulphoxide reductase MrsB domain

phrase: LDEWRSMLDPEQYQVCRLKGTERPFSGKYNSERRDGIYHCICCGLPLFDAQTKFDAGCGWPSFYAPIEDSAMIEIRDTSHGMIRTEVTCARCDAHLGHVFPDGPPPTGLRYCINSVCIDLRP
type: DOMAIN
name: Met_Sox_Rdtase_MsrB_dom
description: Peptide methionine sulphoxide reductase MrsB domain

phrase: KTLDEWRSMLDPEQYQVCRLKGTERPFSGKYNSERRDGIYHCICCGLPLFDAQTKFDAGCGWPSFYAPIEDSAMIEIRDTSHGMIRTEVTCARCDAHLGHVFPDGPPPTGLRYCINSVCID
type: DOMAIN
name: Met_Sox_Rdtase_MsrB_dom
description: Peptide methionine sulphoxide reductase MrsB domain
Protein sequence:
MSSIKKESSSGSENTGPSVFLSEIIGSSVTVRLHNGVEYLGNLQSIDGYMNIVLDETKEFVGGDQARNYGDVFIRGNNVLYISEA

Annotated regions:
phrase: GPSVFLSEIIGSSVTVRLHNGVEYLGNLQSIDGYMNIVLDETKEFVGGDQARNYGDVFIRGNNVLYISE
type: DOMAIN
name: Sm
description: Sm domain

phrase: VFLSEIIGSSVTVRLHNGVEYLGNLQSIDGYMNIVLDETKEFVGGDQARNYGDVFIRGNNVLYIS
type: DOMAIN
name: Sm_dom_euk/arc
description: Sm domain, eukaryotic/archaea-type

phrase: FLSEIIGSSVTVRLHNGVEYLGNLQSIDGYMNIVLDETKEFVGGDQARNYGDVFIRGNNVLYI
type: DOMAIN
name: Sm_dom_euk/arc
description: Sm domain, eukaryotic/archaea-type
Protein sequence:
MAKKITGYVKLQVPAGAANPSPPIGPALGQRGLNIMEFCKAFNAKTAQIEKGTPIPVIITAYQDRSFTFEMKQPPVSFFLKKAAGMKIGKKPASGSKTPGKGAPAGRISEAQIREIAEKKMPDLNCDSVDSAVAMIRGSARAMGLEITG

Annotated regions:
phrase: VKLQVPAGAANPSPPIGPALGQRGLNIMEFCKAFNAKTAQIEKGTPIPVIITAYQDRS
type: DOMAIN
name: Ribosomal_uL11_N
description: Large ribosomal subunit protein uL11, N-terminal

phrase: KQPPVSFFLKKAAGMKIGKKPASGSKTPGKGAPAGRISEAQIREIAEKKMPDLNCDSVDSAVAMIRGSARAMGLE
type: DOMAIN
name: Ribosomal_uL11_C
description: Large ribosomal subunit protein uL11, C-terminal
Protein sequence:
MACSKHLVLFLTILLSLAETPDSAPAHRGRGGWTLNSAGYLLGPVLHLSSKANQGRKTDSALEILDLWKAIDGLPYSRSPRMTKRSMGETFVKPRTGDLRIVDKNVPDEEATLNL

Annotated regions:
phrase: GWTLNSAGYLLG
type: DOMAIN
name: Galanin
description: Galanin

phrase: GWTLNSAGYLLG
type: DOMAIN
name: Galanin
description: Galanin
Protein sequence:
MFPKINTIDPYISLRLFEVKPKYVGYSSIDARNQSFAIHGIKNYEKFSNAGFFYTSPTEITCYCCGMKFCNWLYEKHPLQVHGFWSRNCGFMRATLGIIGLKKMIDSYNDYYNNEVFVKHKNRVYTHKRLEDMGFSKPFMRFILANAFIPPYRKYIHKIILNERYFTFKFAAHLLSFHKVNLDNQTTYCMTCGIEPIKKDENFCNACKTLNYKHYKTLNFSVKL

Annotated regions:
phrase: KNYEKFSNAGFFYTSPTEITCYCCGMKFCNWLYEKHPLQVHGFWSRNCGF
type: REPEAT
name: BIR_rpt
description: BIR repeat

phrase: DARNQSFAIHGIKNYEKFSNAGFFYTSPTEITCYCCGMKFCNWLYEKHPLQVHGFWSRNCGFMR
type: REPEAT
name: BIR_rpt
description: BIR repeat

phrase: ATLGIIGLKKMIDSYNDYYNNEVFVKHKNRVYTHKRLEDMGFSKPFMRFILANAFIPPYRKYIHKIILNERYFTFKFAAHLLSFHKVNLDNQTTYCMTCGIEPIKKDENFCNACKTLNYKHYKTLNFSVK
type: DOMAIN
name: ASFV_p27_C
description: African swine fever virus, IAP-like p27, C-terminal

phrase: KYVGYSSIDARNQSFAIHGIKNYEKFSNAGFFYTSPTEITCYCCGMKFCNWLYEKHPLQVHGFWSRNCGFM
type: REPEAT
name: BIR_rpt
description: BIR repeat

phrase: SSIDARNQSFAIHGIKNYEKFSNAGFFYTSPTEITCYCCGMKFCNWLYEKHPLQVHGFWSRNCGFMR
type: REPEAT
name: BIR_rpt
description: BIR repeat

phrase: IDARNQSFAIHGIKNYEKFSNAGFFYTSPTEITCYCCGMKFCNWLYEKHPLQVHGFWSRNCGF
type: REPEAT
name: BIR_rpt
description: BIR repeat
Protein sequence:
MTDDVTNVEQPSTASEQQPQDVPAAEPSAAKKRRANKAKSKATAAAIEQRLGHSFADPSLLTTAFTHVSALKSARRTDSYQRLEFLGDHVLGLIVSDMLYRAFPDADEGELSKRLADLVRKETCADVARSLDLVEGIKLGTVGAGAGAKLRKSVLGDICEAVIGAIYLDGGYEAASDFVRRNWTERMRKPARSLRDPKTVLQEWAQARGLPTPVYREVERTGPHHDPQFRVAVILPGLEPAEGLGGSKRAAEKVAASAMLAREGVGTGGNDG

Annotated regions:
phrase: SLLTTAFTHVSALKSARRTDSYQRLEFLGDHVLGLIVSDMLYRAFPDADEGELSKRLADLVRKETCADVARSLDLVEGIKLGTVGAGAGAKLRKSVLGDICEAVIGAIYLDGGYEAASDFVRRNWTERMRKPAR
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: SLLTTAFTHVSALKSARRTDSYQRLEFLGDHVLGLIVSDMLYRAFPDADEGELSKRLADLVRKETCADVARSLDLVEGIKLGTVGAGAGAKLRKSVLGDICEAVIGAIYLDGGYEAASDFVRRN
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: AAAIEQRLGHSFADPSLLTTAFTHVSALKSARRTDSYQRLEFLGDHVLGLIVSDMLYRAFPDADEGELSKRLADLVRKETCADVARSLDLVEGIKLGTVGAGAGAKLRKSVLGDICEAVIGAIYLDG
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: QRLEFLGD
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: DPKTVLQEWAQARGLPTPVYREVERTGPHHDPQFRVAVILPGLEPAEGLGGSKRAAEKVAASAMLAREG
type: DOMAIN
name: dsRBD_dom
description: Double-stranded RNA-binding domain

phrase: DPSLLTTAFTHVSALKSARRTDSYQRLEFLGDHVLGLIVSDMLYRAFPDADEGELSKRLADLVRKETCADVARSLDLVEGIKLGTVGAGAGAKLRKSVLGDICEAVIGAIYLDGGYEAASDFVRRN
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: PKTVLQEWAQARGLPTPVYREVERTGPHHDPQFRVAVILPGLEPAEGLGGSKRAAEKVAASAML
type: DOMAIN
name: dsRBD_dom
description: Double-stranded RNA-binding domain

phrase: PKTVLQEWAQARGLPTPVYREVERTGPHHDPQFRVAVILPGLEPAEGLGGSKRAAEKVAASAMLARE
type: DOMAIN
name: dsRBD_dom
description: Double-stranded RNA-binding domain
Protein sequence:
MESFNVVETLQPAERALFWVGALITASLALYVVYKTITGFRIWVLGNGDLLSPKLGKWAVVTGATDGIGKSYAEELARRGFSMMLISRSQEKLDDVAKSLESTYKVETKTIAVDFSQIDVYPKIEKGLAGLEIGILVNNVGISYSYPEFFLHIPDLENFITTMINVNITSVCQMTRLVLPRMEARAKGVILNISSASGMFPVPLLTIYSSTKAFVDFFSRGLQTEYKCKGIIIQSVLPFFVATKMTKIRKPTLDKPTPERYVAAELNTVGLQDQTNGYFPHAVMGWVTTILAPIDLVLNLGLRMNKAQRGGYLRRRKLR

Annotated regions:
phrase: SASGMFPVPLLTIYSSTKAFVDFFSRGL
type: CONSERVED_SITE
name: Sc_DH/Rdtase_CS
description: Short-chain dehydrogenase/reductase, conserved site
Protein sequence:
MAKQKVRIRLKAYDHKILDQSARQIVEAAERTGALVAGPVPLPTKIERYSVIRSGFIDKDSQEQFEIRTHKRLIDVLDPSQQTINALMKLNLPAGVDIEIKL

Annotated regions:
phrase: RIRLKAYDHKILDQSARQIVEAAERTGALVAGPVPLPTKIERYSVIRSGFIDKDSQEQFEIRTHKRLIDVLDPSQQTINALMKLNLPAGVDIEI
type: DOMAIN
name: Ribosomal_uS10_dom
description: Small ribosomal subunit protein uS10 domain

phrase: AERTGALVAGPVPLP
type: CONSERVED_SITE
name: Ribosomal_uS10_CS
description: Small ribosomal subunit protein uS10, conserved site

phrase: RIRLKAYDHKILDQSARQIVEAAERTGALVAGPVPLPTKIERYSVIRSGFIDKDSQEQFEIRTHKRLIDVLDPSQQTINALMKLNLPAGVDIEI
type: DOMAIN
name: Ribosomal_uS10_dom
description: Small ribosomal subunit protein uS10 domain
Protein sequence:
MIEADRIISGQAKVDEDVIDRAIRPKLLADYVGQPQVREQMDIFIKAAKLRQDALDHLLIFGPPGLGKTTLANIVANEMGVNIRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSPAIEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGSLTSPLRDRFGIVQRLEFYSVEDLTSIVARSADCLNLELEQQAAFEVARRSRGTPRIANRLLRRVRDYADVRNGGIISINVAKQALSMLDVDDAGFDYLDRKLLSAVIERFDGGPVGLDNLAAAIGEERDTIEDVLEPYLIQQGFLQRTPRGRIATSQTYRHFGLQKLSD

Annotated regions:
phrase: AGFDYLDRKLLSAVIERFDGGPVGLDNLAAAIGEERDTIEDVLEPYLIQQGFLQRTPRGRIATSQTYRH
type: DOMAIN
name: RuvB_C
description: RuvB C-terminal winged helix domain

phrase: ALDHLLIFGPPGLGKTTLANIVANEMGVNIRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSPAIEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGSLTSPLRDRFGIVQR
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: IRPKLLADYVGQPQVREQMDIFIKAAKLRQDALDHLLIFGPPGLGKTTLANIVANEMGVNIRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSPAIEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGSLTSPLRDRFGIVQR
type: DOMAIN
name: RuvB-like_N
description: RuvB-like P-loop domain

phrase: YSVEDLTSIVARSADCLNLELEQQAAFEVARRSRGTPRIANRLLRRVRDYADVRNGGIISINVAKQALSMLDV
type: DOMAIN
name: AAA_lid_4
description: RuvB, AAA lid domain
Protein sequence:
MVITRDFFLFLSKSGFLNKMARNWGSRIAAGKIIGGNDFNSSIPTIRQLNSQGLSVTVDHLGEFVNSAEVARERTEECIQTIATIADQELNSHVSLKMTSLGLDIDMDLVYENMTKILQTAEKHKIMVTIDMEDEVRCQKTLDIFKDFRKKYEHVSTVLQAYLYRTEKDIDDLDSLNPFLRLVKGAYKESEKVAFPEKSDVDENYKKIIRKQLLNGHYTAIATHDDKMIDFTKQLAKEHGIANDKFEFQMLYGMRSQTQLSLVKEGYNMRVFLPYGEDWYGYFMRRLAERPSNIAFAFKGMTKK

Annotated regions:
phrase: PTIRQLNSQGLSVTVDHLGEFVNSAEVARERTEECIQTIATIADQELNSHVSLKMTSLGLDIDMDLVYENMTKILQTAEKHKIMVTIDMEDEVRCQKTLDIFKDFRKKYEHVSTVLQAYLYRTEKDIDDLDSLNPFLRLVKGAYKESEKVAFPEKSDVDENYKKIIRKQLLNGHYTAIATHDDKMIDFTKQLAKEHGIANDKFEFQMLYGMRSQTQLSLVKEGYNMRVFLPYGEDWYGYFMRRLAERPS
type: DOMAIN
name: Proline_DH_dom
description: Proline dehydrogenase domain
Protein sequence:
MNDPSLLGYPNVGPQQQQQQQQQQHAGLLGKGTPNALQQQLHMNQLTGIPPPGLMNNSDVHTSSNNNSRQLLDQLANGNANMLNMNMDNNNNNNNNNNNNNNNGGGSGVMMNASTAAVNSIGMVPTVGTPVNINVNASNPLLHPHLDDPSLLNNPIWKLQLHLAAVSAQSLGQPNIYARQNAMKKYLATQQAQQAQQQAQQQAQQQVPGPFGPGPQAAPPALQPTDFQQSHIAEASKSLVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVSTPLTPKIELFANGKDEANQALLQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIFNISANIFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHERRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQHYATPKMYRYTPSWALSWDYRRNKLKEQILSYDSDLLCLQEVESKTFEEYWVPLLDKHGYTGIFHAKARAKTMHSKDSKKVDGCCIFFKRDQFKLITKDAMDFSGAWMKHKKFQRTEDYLNRAMNKDNVALFLKLQHIPSGDTIWAVTTHLHWDPKFNDVKTFQVGVLLDHLETLLKEETSHNFRQDIKKFPVLICGDFNSYINSAVYELINTGRVQIHQEGNGRDFGYMSEKNFSHNLALKSSYNCIGELPFTNFTPSFTDVIDYIWFSTHALRVRGLLGEVDPEYVSKFIGFPNDKFPSDHIPLLARFEFMKTNTGSKKV

Annotated regions:
phrase: LTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQL
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: NLRVLDLSHNRLTSLPAELGS
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: LSNLRVLDLSHNRLTSLPAELGS
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LTRLYLNGNSLTELPAEIK
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LSYNTLCQHYATPKMYRYTPSWALSWDYRRNKLKEQILSYDSDLLCLQEVESKTFEEYWVPLLDKHGYTGIFHAKARAKTMHSKDSKKVDGCCIFFKRDQFKLITKDAMDFSGAWMKHKKFQRTEDYLNRAMNKDNVALFLKLQHIPSGDTIWAVTTHLHWDPKFNDVKTFQVGVLLDHLETLLKEETSHNFRQDIKKFPVLICGDFNSYINSAVYELINTGRVQIHQEGNGRDFGYMSEKNFSHNLALKSSYNCIGELPFTNFTPSFTDVIDYIWFSTHALRVRGLLGEVDPEYVSKFIGFPNDKFPSD
type: DOMAIN
name: Endo/exonuclease/phosphatase
description: Endonuclease/exonuclease/phosphatase
Protein sequence:
MYTGATTYVVGFPRIGEQRELKKVLERYWDQKTSFSEIDEIAKNLRRRHWLYQKEAGISFISSNDFSLYDNMLDTAIMLNAVPERFSNIHDKQELYFAMARGTNNTVAMEMTKWFNTNYHYIVPELSDTMNFSLCADKIINEYREAKEYGLRTKINLIGPITFLSLSKPVDGNQDTLELLPKILPCYVSLLKKIADLDDEVYIQFDEPIVVKDIDRRTLNLFYLCYKELSNVSNRLRLIVMTYFDHAVEAVKILSDIPIYGIGLDFVYGQENLKVLDSLNGKKLIAGVIDGRNIWKNNYHNTLTLLKDIEKNVKKEDIILSTTCSLLHVPYSLKHENHLDKDIKSWMSFAREKLDELSDLAKLFFVENNSEDILTILENNQRIFREKQQSSKVIDPIVRERVGNIKRRERDGSFNDRNEAQRKKLDLPLLPTTTIGSFPQTEEIRKLRRDFKNNVISQIEYDTGIKNYIDSCIQFQEDIGLDVLVHGEPERNDMVEYFGERLSGFVFTQNGWVQSYGSRCVKPTVIFGDVSRPKPMTIDTILYAKSKTNKIVKGMLTGPVTILNWSYCRSDMERSAVCEQIALAIRDEINDLQKAGIKIIQVDEAAFKEGYPLRKEKVAYYENWAVKSFKLAVSSAAIETQIHTHMCYSDFNDIIHTIEKMDADVITIETSRSGNKLLTVFATRGYKNEIGPGIYDIHSPRVPSVEELEEKIRNLMLVLPPSKLWINPDCGLKTRKWDEIRWSLSNMVKAAQHIRLGLQRVMFV

Annotated regions:
phrase: TYVVGFPRIGEQRELKKVLERYWDQKTSFSEIDEIAKNLRRRHWLYQKEAGISFISSNDFSLYDNMLDTAIMLNAVPERFSNIHDKQELYFAMARGTNNTVAMEMTKWFNTNYHYIVPELSDTMNFSLCADKIINEYREAKEYGLRTKINLIGPITFLSLSKPVDGNQDTLELLPKILPCYVSLLKKIADLDDEVYIQFDEPIVVKDIDRRTLNLFYLCYKELSNVSNRLRLIVMTYFDHAVEAVKILSDIPIYGIGLDFVYGQENLKVLDSLNGKKLIAGVIDGRNIWKNNYHNTLTLLKDIEKN
type: DOMAIN
name: Cbl-indep_Met_Synth_N
description: Cobalamin-independent methionine synthase MetE, N-terminal

phrase: LPTTTIGSFPQTEEIRKLRRDFKNNVISQIEYDTGIKNYIDSCIQFQEDIGLDVLVHGEPERNDMVEYFGERLSGFVFTQNGWVQSYGSRCVKPTVIFGDVSRPKPMTIDTILYAKSKTNKIVKGMLTGPVTILNWSYCRSDMERSAVCEQIALAIRDEINDLQKAGIKIIQVDEAAFKEGYPLRKEKVAYYENWAVKSFKLAVSSAAIETQIHTHMCYSDFNDIIHTIEKMDADVITIETSRSGNKLLTVFATRGYKNEIGPGIYDIHSPRVPSVEELEEKIRNLMLVLPPSKLWINPDCGLKTRKWDEIRWSLSNMVKAA
type: DOMAIN
name: Met_Synth_C/arc
description: Cobalamin-independent methionine synthase MetE, C-terminal/archaeal

phrase: PTTTIGSFPQTEEIRKLRRDFKNNVISQIEYDTGIKNYIDSCIQFQEDIGLDVLVHGEPERNDMVEYFGERLSGFVFTQNGWVQSYGSRCVKPTVIFGDVSRPKPMTIDTILYAKSKTNKIVKGMLTGPVTILNWSYCRSDMERSAVCEQIALAIRDEINDLQKAGIKIIQVDEAAFKEGYPLRKEKVAYYENWAVKSFKLAVSSAAIETQIHTHMCYSDFNDIIHTIEKMDADVITIETSRSGNKLLTVFATRGYKNEIGPGIYDIHSPRVPSVEELEEKIRNLMLVLPPSKLWINPDCGLKTRKWDEIRWSLSNMVKAA
type: DOMAIN
name: Met_Synth_C/arc
description: Cobalamin-independent methionine synthase MetE, C-terminal/archaeal
Protein sequence:
MKAVVVKGHKQGYEVREVQDPKPASGEVIIKVRRAALCYRDLLQLQGFYPRMKYPVVLGHEVVGEILEVGEGVTGFSPGDRVISLLYAPDGTCHYCRQGEEAYCHSRLGYSEELDGFFSEMAKVKVTSLVKVPTRASDEGAVMVPCVTGMVYRGLRRANLREGETVLVTGASGGVGIHALQVAKAMGARVVGVTTSEEKASIVGKYADRVIVGSKFSEEAKKEDINVVIDTVGTPTFDESLKSLWMGGRIVQIGNVDPTQSYQLRLGYTILKDIAIIGHASATRRDAEGALKLTAEGKIRPVVAGTVHLEEIDKGYEMLKDKHKVGKVLLTT

Annotated regions:
phrase: GHEVVGEILEVGEG
type: CONSERVED_SITE
name: ADH_Zn_CS
description: Alcohol dehydrogenase, zinc-type, conserved site

phrase: GVGIHALQVAKAMGARVVGVTTSEEKASIVGKYADRVIVGSKFSEEAKKEDINVVIDTVGTPTFDESLKSLWMGGRIVQIGNVDPTQSYQLRLGYTILKDIAIIGHASATRRDAEGALKLT
type: DOMAIN
name: ADH-like_C
description: Alcohol dehydrogenase-like, C-terminal

phrase: SGEVIIKVRRAALCYRDLLQLQGFYPRMKYPVVLGHEVVGEILEVGEGVTGFSPGDRVISLLYAPDGTCHYCRQGEEAYCHSRLGYSEELDGFFSEMAKVKVTSLVKV
type: DOMAIN
name: ADH-like_N
description: Alcohol dehydrogenase-like, N-terminal

phrase: GETVLVTGASGGVGIHALQVA
type: CONSERVED_SITE
name: Quin_OxRdtase/zeta-crystal_CS
description: Quinone oxidoreductase/zeta-crystallin, conserved site

phrase: GHKQGYEVREVQDPKPASGEVIIKVRRAALCYRDLLQLQGFYPRMKYPVVLGHEVVGEILEVGEGVTGFSPGDRVISLLYAPDGTCHYCRQGEEAYCHSRLGYSEELDGFFSEMAKVKVTSLVKVPTRASDEGAVMVPCVTGMVYRGLRRANLREGETVLVTGASGGVGIHALQVAKAMGARVVGVTTSEEKASIVGKYADRVIVGSKFSEEAKKEDINVVIDTVGTPTFDESLKSLWMGGRIVQIGNVDPTQSYQLRLGYTILKDIAIIGHASATRRDAEGALKLTAEGKIRPVVAGTVHLEEIDKGYEMLKDKHKVGKVL
type: DOMAIN
name: PKS_ER
description: Polyketide synthase, enoylreductase domain
Protein sequence:
MAATKSEPLDLDLTAEEARAEYARLSDAILEADRLYYQEDAPEISDAEYDRLRRRLEDIEARFPDLAGTGAASTSVGAKPSEKFAKVRHAVPMLSLGNAFDDAEVAEFVARVRRFLGWSDDTPLAFTAEPKIDGLSLSLRYVNGRLDTAATRGDGEVGENVTANARTVQDIPAVLAGAGWPEICEVRGEVYLSHADFAAINARQEAAGKPLFANPRNAAAGSLRQLDPAITASRPLRFFAYAWGELSAPIAETQTGVLEQFATWGLPVNPRTETFTDTAAMLAHYRRIEADRAGLGYDIDGVVYKVDDLALQKRLGFVSRSPRWALAHKFAAQEATTVVEDIVINVGRTGSLNPLAKLRPVTVGGVVVSNATLHNEGYVKGVGADGEPIRDGRDIRVGDTVTVVRAGDVIPKVMDVDLTKRPADSRPYAFPESCPACGSRAVRAINPRTGRPDAVRRCTGGLICPAQGVERMKHFVSRNGFDIEGFGETYIEVLFEAGLVRQPADLFRLDFEELKAAIVARREALSAERRAESGTAEPPKKAAKKKGDEDDKAIKNLLAAVEARRAVPMNRLLFALGIPQIGEATAKALAKRFADMPTLIAAIREAAAAQPGPDWVELTAVPRVGGTTRDRLLDLGFPEDDAAPAKERARLSAVQRENLLAHYGDVDAVRAAIAQAAAQRPGDAYRVFADDGEIGPVATDALLLFFSEPHNADAVTALLDAVAVQPMERAAAASTFAGKTVVFTGALEKMTRNEAKAVAERLGAKVSG

Annotated regions:
phrase: EARAEYARLSDAILEADRLYYQEDAPEISDAEYDRLRRRLEDIEARFPDLAGTGAASTSVGAKPSEKFAKVRHAVPMLSLGNAFDDAEVAEFVARVRRFLGWSDDTPLAFTAEPKIDGLSLSLRYVNGRLDTAATRGDGEVGENVTANARTVQDIPAVLAGAGWPEICEVRGEVYLSHADFAAINARQEAAGKPLFANPRNAAAGSLRQLDPAITASRPLRFFAYAWGELSAPIAETQTGVLEQFATWGLPVNPRTETFTDTAAMLAHYRRIEADRAGLGYDIDGVVYKVDDLALQKRLGFVSRSPRWALAHKFAAQEATTVVEDIVINVGRTGSLNPLAKLRPVTVGGVVVSNATLHNEGYVKGVGADGEPIRDGRDIRVGDTVTVVRAGDVIPKVMDVDLTKRPADSRPYAFPESCPACGSRAVRAINPRTGRPDAVRRCTGGLICPAQGVERMKHFVSRN
type: DOMAIN
name: DNAligase_N
description: NAD-dependent DNA ligase, N-terminal

phrase: EKFAKVRHAVPMLSLGNAFDDAEVAEFVARVRRFLGWSDDTPLAFTAEPKIDGLSLSLRYVNGRLDTAATRGDGEVGENVTANARTVQDIPAVLAGAGWPEICEVRGEVYLSHADFAAINARQEAAGKPLFANPRNAAAGSLRQLDPAITASRPLRFFAYAWGELSAPIAETQTGVLEQFATWGLPVNPRTETFTDTAAMLAHYRRIEADRAGLGYDIDGVVYKVDDLALQKRLGFVSRSPRWALAHKFAA
type: DOMAIN
name: DNAligase_adenylation
description: NAD-dependent DNA ligase, adenylation

phrase: AEYARLSDAILEADRLYYQEDAPEISDAEYDRLRRRLEDIEARFPDLAGTGAASTSVGAKPSEKFAKVRHAVPMLSLGNAFDDAEVAEFVARVRRFLGWSDDTPLAFTAEPKIDGLSLSLRYVNGRLDTAATRGDGEVGENVTANARTVQDIPAVLAGAGWPEICEVRGEVYLSHADFAAINARQEAAGKPLFANPRNAAAGSLRQLDPAITASRPLRFFAYAWGELSAPIAETQTGVLEQFATWGLPVNPRTETFTDTAAMLAHYRRIEADRAGLGYDIDGVVYKVDDLALQKRLGFVSRSPRWALAHKFA
type: DOMAIN
name: DNAligase_adenylation
description: NAD-dependent DNA ligase, adenylation

phrase: KIDGLSLSLRYVNGRLDTAATRGDGEVGE
type: ACTIVE_SITE
name: DNA_ligase_AS
description: NAD-dependent DNA ligase, active site

phrase: VGRTGSLNPLAKLRP
type: CONSERVED_SITE
name: DNA_ligase_CS
description: NAD-dependent DNA ligase, conserved site

phrase: AAASTFAGKTVVFTGALEKMTRNEAKAVAERLGAKVS
type: DOMAIN
name: BRCT_dom
description: BRCT domain

phrase: RLLFALGIPQIGEATAKALAKRFADMPTLIAAIR
type: DOMAIN
name: DisA/LigA_HHH
description: DisA/LigA, helix-hairpin-helix motif

phrase: TTVVEDIVINVGRTGSLNPLAKLRPVTVGGVVVSNATLHNEGYVKGVGADGEPIRDGRDIRVGDTVTVVRAGDVIPKVMDVDLTKRPA
type: DOMAIN
name: NAD_DNA_ligase_OB
description: NAD-dependent DNA ligase, OB-fold
Protein sequence:
MAFKLWLLDEETIYEHVFERYTQLEGQSGKLAQDLGIQDRRGGVLEITFEPSGLEGGRKKKRVRRRNKASSVEEDQNVAVDSYHVSVGQSISSLRSSRDNGNSTTGYVLWSTTPFFINWLLYSTSAAPFRLGSQVEVTCGSSCEGHKLELPRLVDLTGADRGKRGILELGAGISGILPVILGNFVDTYVSTDQKGILNKLKDNIMENLSQLTRKRCISRSLRLELPTVEPVGDADITAASLPSKSTLHLEVAALDWEKINLQDKKTHSLHPELSLIGETCSSVYVIAMDVIYNEYLIDPFLKTLKQLKHWLQTTYNLQFHVLVGIHLRSQEVTTLFLEKAIIEYDFTVYDIVDQVIQESRFNFYLIT

Annotated regions:
Protein sequence:
MSTDTQIIKLVEEILCEKTNDYDYEGPMPDEAELQKRAEDGMKKFATVFAGMSQEVKENALRSCLIHVAGINHRNKVRKHMQVLKDLVGKGIIPARLLCEQIMSSEKLVYQNQSFWIECFQVVRRVIGGVDYKGVREIMKCCKEKALSFPSGISSSILPQMLELTEVIEHIFNRNACLLPAYFIINEIQKADYQDTHWRIANLIANFIEEFVIVAQMLSIIGHSSMLPIVEHSSYADNLINPWKLDPTTLKLALRGNLPYEPELLQPQIKLLRFVLEQPYSRDMVCSMLNLQKTQKQKCMALEEQLVWLVMCAMECSEKEPVHTVDGEISSHTQWVWLHLSSQLIYFVLFQFATFQNIVNTLHDKLAVSNLRRGRDHLMWVLLQYISGSIQRNSITNFLPILKLYDSLYPEKEPLPVPDYNNPLCTHQMAPTCIWIHLLKRAQSEHYNINRSIPTALKLHHEFLQHLVMPNNNATLCMGSDYRLALLCNAYSTNPDYFSRPMAALIETILGNCKNPSAGGGSTSATQPLPTVPLSMSVLDSLTIHSKMSLIHSIVTHMIKQAQSKTTVPNTNNMAPALVETYSRLLVYTEIESLGIKGFLGQLLPQVFKSAAWGILYTLLEMFSYRMHHIQPHYRVQLLSHLHSLASVPHTNQMQLHSCVESTALRLITGLGSVEVQAQMSRYVTEQKAPGNIVSAESEELNRALILTLARSMQITGTGNDPQSTTWCKELLNSIMQNTPHTWSQHTLQCFPPVLNDLVVQHNVPKENKQLLKKSVDEEYRNWTSMSNENDIIGHFGTAGTPGTPPLFLCLLFKMIVETDTISPVAYKILERIGARALSAHLRKLCDYLVFEVSNSGDGAHVNKCVDTINDMIWKYNIITIDRLVLCLSLRTLEGNEAQVSFCIIQLLLLKTSEFRNRLQEFVSINSPEHWKQNNWHERHLAFHQKFPEKFTPDESVSHPSLPVYFGNVCLRFLPVLDITIHRYLEVPAAMSKTLDVLLDHLGPLYKFHDRPITYLYNTLHYYERMLRDRPQLKKRLVGTVIGSLKDVRPDNWAVTEQYQSYMSKKDDAVNWMPDLNYYIYLVRRMQDTIDGTNIFPGTDWRFNEFPNPPAHALYVTCVELLGLPVGPQGVANSLIDVVVKGYPVIPSQSVHNWINTIGLIMAALPESYWGVIYERLREVISCPQMTDWLHRQSPFELFNFKIVREAMLEKNYVVILAIAQSILHHSGIGQISTVTEHIKENFKPIIKTEYQLIYLCHLVGPFLNRLCAERSRAVSDITLILYELLEQVDKAQPSLALKYMDPICDLLYHIKYMFIGDMMKSDLEAIIRRLRPALQMRLRFITRLNVDEIGVDQQNVDASAAGQGPAQGGPQSQQPQTTGQAGGQPSVPQQQQQTQQQQPQQQQQVQQQ

Annotated regions:
Protein sequence:
MSEKYTNEKYVVTWDMFHMHARKLAERLLPASQWKGIIAVSRGGLFPAAVLARELSIRHVETVCISSYDHDEQGELKVLHAAQTDGEGFIVVDDLVDTGNTAKEIRKMYPKAKFVTVFAKPAGTPLVDDYVIDIPQETWIEQPWDLGITFVPPLARK

Annotated regions:
phrase: ARKLAERLLPASQWKGIIAVSRGGLFPAAVLARELSIRHVETVCISSYDHDEQGELKVLHAAQTDGEGFIVVDDLVDTGNTAKEIRKMYPKAKFVTVFAKPAGTPLVDDYVID
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: HMHARKLAERLLPASQWKGIIAVSRGGLFPAAVLARELSIRHVETVCISSYDHDEQGELKVLHAAQTDGEGFIVVDDLVDTGNTAKEIRKMYPKAKFVTVFAKPAGTPLVDDYVIDIPQETWIEQPWDLG
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain
Protein sequence:
MAQNFTKLNPQFENIIFEHDDNQMILNFGPQHPSSHGQLRLILELEGEKIIKATPEIGYLHRGCEKLGENMTYNEYMPTTDRLDYTSSTSNNYAYAYAVETLLNLEIPRRAQVIRTILLELNRMISHIFFISVHALDVGAMSVFLYAFKTREYGLDLMEDYCGARLTHNAIRIGGVPLDLPPNWLEGLKKFLGEMRECKKLIQGLLDKNRIWRMRLENVGVVTPKMAQSWGMSGIMLRGTGIAYDIRKEEPYELYKELDFDVPVGNYGDSYDRYCLYMLEIDESIRIIEQLIPMYAKTDTPIMAQNPHYISAPKEDIMTQNYALMQHFVLVAQGMRPPVGEVYAPTESPKGELGFFIHSEGEPYPHRLKIRAPSFYHIGALSDILVGQYLADAVTVIGSTNAVFGEVDR

Annotated regions:
phrase: DVGAMSVFLYAFKTREYGLDLMEDYCGARLTHNAIRIGGVPLDLPPNWLEGLKKFLGEMRECKKLIQGLLDKNRIWRMRLENVGVVTPKMAQSWGMSGIMLRGTGIAYDIRKEEPYELYKELDFDVPVGNYGDSYDRYCLYMLEIDESIRIIEQLIPMYAKTDTPIMAQNPHYISAPKEDIMTQNYALMQHFVLVAQGMRPPVGEVYAPTESPKGELGFFIHSEGEPYPHRLKIRAPSFYHIGALSDILVGQYLADAVTVIGSTNAVFGEVD
type: DOMAIN
name: NADH_Q_OxRdtase_suD
description: NADH-quinone oxidoreductase, subunit D
Protein sequence:
MAIVKCKPTSPGRRHVVKVVNADLHKGKPYAPLLEKNSKNGGRNNNGRITVRHIGGGHKHHYRVVDFKRTKDGIPATVERLEYDPNRSANIALVLYKDGERRYILAPKGVNAGDVIQSGVDAPIKAGNTLPMRNIPVGSTVHNVELKPGKGGQLARSAGAYAQIVARDGAYVTIRLRSGEMRKVLSEGRATIGEVGNSEHMLRELGKAGASRWRGVRPTVRGVVMNPVDHPHGGGEGRTSGGRHPVSPWGMPTKGFKTRKNKRTDKYIVRRRNK

Annotated regions:
phrase: KAGNTLPMRNIPVGSTVHNVELKPGKGGQLARSAGAYAQIVARDGAYVTIRLRSGEMRKVLSEGRATIGEVGNSEHMLRELGKAGASRWRGVRPTVRGVVMNPVDHPHGGGEGRTSGGRHPVSPW
type: DOMAIN
name: Ribosomal_uL2_C
description: Large ribosomal subunit protein uL2, C-terminal

phrase: IKAGNTLPMRNIPVGSTVHNVELKPGKGGQLARSAGAYAQIVARDGAYVTIRLRSGEMRKVLSEGRATIGEVGNSEHMLRELGKAGASRWRGVRPTVRGVVMNPVDHPHGGGEGRTSGGRHPVSPWGM
type: DOMAIN
name: Ribosomal_uL2_C
description: Large ribosomal subunit protein uL2, C-terminal

phrase: PTVRGVVMNPV
type: CONSERVED_SITE
name: Ribosomal_uL2_CS
description: Large ribosomal subunit protein uL2, conserved site

phrase: GRNNNGRITVRHIGGGHKHHYRVVDFKRTKDGIPATVERLEYDPNRSANIALVLYKDGERRYILAPKGVNAGDVI
type: DOMAIN
name: Ribosomal_uL2_RNA-bd_dom
description: Large ribosomal subunit protein uL2, RNA-binding domain
Protein sequence:
MDVEVKKNGKNAQLKDHEVKELIKQSQNGDQQARDLLIEKNMRLVWSVVQRFLNRGYEPDDLFQIGCIGLLKSVDKFDLTYDVRFSTYAVPMIIGEIQRFIRDDGTVKVSRSLKELGNKIRRAKDELSKTLGRVPTVQEIADHLEIEAEDVVLAQEAVRAPSSIHETVYENDGDPITLLDQIADNSEEKWFDKIALKEAISDLEEREKLIVYLRYYKDQTQSEVAERLGISQVQVSRLEKKILKQIKVQMDHTDG

Annotated regions:
phrase: LIEKNMRLVWSVVQRFLNRGYEPDDLFQIGCIGLLKSVDKFDLTYDVRFSTYAVPMIIGEIQRFIRD
type: DOMAIN
name: RNA_pol_sigma70_r2
description: RNA polymerase sigma-70 region 2

phrase: NAQLKDHEVKELIKQSQNGDQQARDLLIEKNMRLVWSVVQRFLNRGYEPDDLFQIGCIGLLKSVDKFDLTYDVRFSTYAVPMIIGEIQRFIRDDGTVKVSRSLKELGNKIRRAKDELSKTLGRVPTVQEIADHLEIEAEDVVLAQEAVRAPSSIHETVYENDGDPITLLDQIADNSEEKWFDKIALKEAISDLEEREKLIVYLRYYKDQTQSEVAERLGISQVQVSRLEKKILKQIKVQMDHT
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: AISDLEEREKLIVYLRYYKDQTQSEVAERLGISQVQVSRLEKKILKQI
type: DOMAIN
name: RNA_pol_sigma70_r4
description: RNA polymerase sigma-70 region 4

phrase: ELGNKIRRAKDELSKTLGRVPTVQEIADHLEIEAEDVVLAQEAVRAPSSIHETVYENDGDPITLLDQIADNS
type: DOMAIN
name: RNA_pol_sigma70_r3
description: RNA polymerase sigma-70 region 3

phrase: DLFQIGCIGLLKS
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: TQSEVAERLGISQVQVSRLE
type: DOMAIN
name: Cro/C1-type_HTH
description: Cro/C1-type helix-turn-helix domain

phrase: ARDLLIEKNMRLVWSVVQRFLNRGYEPDDLFQIGCIGLLKSVDKFDLTYDVRFSTYAVPMIIGEIQRFIRDDGTVKVSRSLKELGNKIRRAKDELSKTLGRVPTVQEIADHLEIEAEDVVLAQEAVRAPSSIHETVYENDGDPITLLDQIADNSEEKWFDKIALKEAISDLEEREKLIVYLRYYKDQTQSEVAERLGISQVQVSRLEKKILKQIKVQ
type: DOMAIN
name: RNA_pol_sigma-70_dom
description: RNA polymerase sigma-70-like domain

phrase: TQSEVAERLGISQVQVSRLEKKILKQ
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: DLFQIGCIGLLKS
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: FSTYAVPM
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: LEEREKLIVYLR
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: TQSEVAERLGISQVQ
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: VSRLEKKILKQ
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70