nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTSIAISSGSFDPITLGHLDIIKRGAKVFDEVYVVVLNNSSKKPFFSVEERLELIREATKDIPNVKVDSHSGLLVEYAKMRNANAILRGLRAVSDFEYEMQITSMNRKLDENIETFFIMTNNQYSFLSSSIVKEVARYGGSVVDLVPPIVERALKEKFQTPLK

Annotated regions:
phrase: GSFDPITLGHLDIIKRGAKVFDEVYVVVLNNSSKKPFFSVEERLELIREATKDIPNVKVDSHSGLLVEYAKMRNANAILRGLRAVSDFEYEMQITSMNRKLDENIETFFIMTNNQYSFLSSSIVK
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: AISSGSFDPITLGHLDIIKRGAKVFDEVYVVVLNNSSKKPFFSVEERLELIREATKDIP
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain
Protein sequence:
MTLQGKPYRLSDLIKQTGVRLTDCSNQFSDRFVSGITQIAQSVERDDIFVAFQGKTRHGVEFLDQVQSCAAVLTDNKGRHIMQSDCLPTRSTPILVTDSPRSDLIVLAKRVYPIDDIRIFGITGTNGKTSTMHIAAKLLEMMGISCGISTTIGSSASESDSCLTTPELCQLYARIFTAKQARADFFALEASSHAINRGRLGDIVLEVAAFTNLTPEHMEEHKNMEAYYQAKKALFLNKRSNSAVINIDTPYGIRLFKETGCSASVISENTKYGLDHKLFWQASVRRVGLSFGFTLISPSGYRVESSISLLGKAFALNTCMAIVILCNLGIDIERIDSVLRKAGGLKMVLPGRMEVFQTGNSPRVIVDHGHTVDAVETALVAAKSITRGRLITIINADGQRDPSKRKHLGQLCGAYSDKLFITDGHSRFENPAEIRRMILDGVEGPRRQVEQIPSMTQAVLAAIDIARSDDTVLCSGFGDDPYLDVLGKKIPYSLRDEVRRGLERFAQGT

Annotated regions:
phrase: GRMEVFQTGNSPRVIVDHGHTVDAVETALVAAKSITRGRLITIINADGQRDPSKRKHLGQLCGAYSDKLFITDGHSRFENPAEIRRMILDGVEGPRRQVEQIPSMTQAVLAAIDIARSDDTVLCS
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: ITGTNGKTSTMHIAAKLLEMMGISCGISTTIGSSASESDSCLTTPELCQLYARIFTAKQARADFFALEASSHAINRGRLGDIVLEVAAFTNLTPEHMEEHKNMEAYYQAKKALFLNKRSNSAVINIDTPYGIRLFKETGCSASVISENTKYGLDHKLFWQASVRRVGLSFGFTLISPSGYRVESSISLLGKAFALNTCMAIV
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central
Protein sequence:
MKFAIESISKNSGRLGQLRIRDGGPEFKTPLLLQTTKGGSIPWLSADVFETHVSRKPQVLQFTLSTMEQMTEALTHWNSGGGRGLSDYVGLPGHLNILLLRDPCETTPSGGNDRDILPLFTRRGKESLSSERYMEIVASFKPDMYEGLCDADTNLESAKKRVQKSVDRTEKFMQYIYEHRGKVNSTLLAPIVGGYNTFARTQSIKHAREQPAGSYGGYIFEGFHANGLSATTLDTSKLLPIVEHCVKQLEEDKPKILPGAYTPLTVLELIQQGIDVFDTSYAYCASLNFKALSFSFVQDAVEHVPFLDITDEAIKEDFTPPLSNCNCLTCQKHTRAYLHHLYKTNELLGPILLMVHNLYHYMAFFEKIRESVAKDTLPQLTELVRNQNGKTQVDYSIAANTKVISKATMGKGFAAAAV

Annotated regions:
phrase: SLSSERYMEIVASFKPDMYEGLCDADTNLESAKKRVQKSVDRTEKFMQYIYEHRGKVNSTLLAPIVGGYNTFARTQSIKHAREQPAGSYGGYIFEGFHANGLSATTLDTSKLLPIVEHCVKQLEEDKPKILPGAYTPLTVLELIQQGIDVFDTSYAYCASLNFKALSFSFVQDAVEHVPFLDITDEAIKEDFTPPLSNCNCLTCQKHTRAYLHHLYKTNELLGPILLMVHNLYHYMAFFEKIRESVAKDTLPQLTELVRNQNG
type: DOMAIN
name: tRNA_ribo_trans-like
description: tRNA-guanine(15) transglycosylase-like

phrase: GRLGQLRIRDGGPEFKTPLLLQTTKGGSIPWLSADVFETHVSRKPQVLQFTLSTMEQMTEALTHWNSGGGRGLSDYVGLPGHLNILLLRDPCETTPSGGNDRDILPLFTRRGKESLSSERYMEIVASFKPDMYEGLCDADTNLESAKKRVQKSVDRTEKFMQYIYEHRGKVNSTLLAPIVGGYNTFARTQSIKHAREQPAGSYGGYIFEGFHANGLSATTLDTSKLLPIVEHCVKQLEEDKPKILPGAYTPLTVLELIQQGIDVFDTSYAYCASLNFKALSFSFVQDAVEHVPFLDITDEAIKEDFTPPLSNCNCLTCQKHTRAYLHHLYKTNELLGPILLMVHNLYHYMAFFEKIRESVAKDTLPQLTELVRN
type: DOMAIN
name: tRNA_ribo_trans-like
description: tRNA-guanine(15) transglycosylase-like
Protein sequence:
MNGAIILAAGQGTRMKSKLPKVLHKIAGEAMLNHVLNALDEAQIEQKIIVLGHQAERIEEDLPKGIEIAYQREQLGTGHAVMQAREIIAEKVENVLVVCGDTPLLKGATLAGLLNNHVREKWAVTVLTGIVEDATGYGRIIRDREGVKAIVEEKDATLEEKQIKEINTGAYCFNKDFLVKALSKLTTDNSQGEYYLTDLIKIAVSEGKAVGAYVLEDFNEALGINNRLQLAQADREFRKRILENLMLEGVTILSPETTYIDAQVTIGQDTIIHPFTYLEGKTIIGQDCILGPHTRIIDSKIGNKVQVENSVIKESTVDDDTNIGPFAYLRPGSVLGKKVKIGDFVEIKKSVIGDGSKVPHLSYVGDAQVGKGVNIGCGTITCNYDGEKKYTTIIQDKAFIGSNTNLVAPVIVEEGAYIGAGSTITKDVPKGSLAIARGKQINIPNWNKEEKD

Annotated regions:
phrase: IGSNTNLVAPVIVEEGAYIGAGSTITKD
type: CONSERVED_SITE
name: Hexapep_transf_CS
description: Hexapeptide transferase, conserved site

phrase: AIILAAGQGTRMKSKLPKVLHKIAGEAMLNHVLNALDEAQIEQKIIVLGHQAERIEEDLPKGIEIAYQREQLGTGHAVMQAREIIAEKVENVLVVCGDTPLLKGATLAGLLNNHVREKWAVTVLTGIVEDATGYGRIIRDREGVKAIVEEKDATLEEKQIKEINTGAYCFNKDFLVKALSKLTTDNSQGEYYLTDLIKIAVSEGKAVGAYVLE
type: DOMAIN
name: NTP_transferase_dom
description: Nucleotidyl transferase domain

phrase: TIIQDKAFIGSNTNLVAPVIVEEGAYIGAGSTIT
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: VTIGQDTIIHPFTYLEGKTIIGQDCILGPHTR
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: GVTILSPETTYIDAQVTIGQDTIIHPFTYLEGKTIIGQDCILGPHTRIIDSKIGNKVQVENSVIKESTVDDDTNIGPFAYLRPGSVLGKKVKIGDFVEIKKSVIGDGSKVPHLSYVGDAQVGKGVNIGCGTITCNYDGEKKYTTIIQDKAFIGSNTNLVAPVIVEEGAYIGAGSTITKDVPKGSLAIARGK
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain
Protein sequence:
MTTTPKPLVLMILDGFGHSESHESNAVYAAKKPVLDRLCASMPNGLISGSGMDVGLPDGQMGNSEVGHMNLGAGRVVYQDFTRVTKAIRDGEFFENPTICAAVDKAVDAGKAVHILGLLSDGGVHSHQDHLIAMAELAFKRGAEKIYLHAFLDGRDTPPKSAQSSIELLDETFKTLGKGRIASLIGRYFAMDRDNRWDRVAQAYNLIVDGQGQFNAATAQEGLQAAYAREESDEFVKATTIGEPVKVEDGDAVVFMNFRADRARELTRVFVEDDFKDFERPRQPKLAGFVMLTQYAASIPAPSAFAPGSLENVLGDYLAKNGKTQLRIAETEKYAHVTFFFSGGREEPFPGEERILIPSPKVATYDLQPEMSAPEVTDKIVDAIEHQRYDVIIVNYANGDMVGHSGVFEAAVKAVECLDLCVGRIVDALEKVGGEALITADHGNVEQMSDESTGQAHTAHTTEPVPFIYVGKRALKVREGGVLADVAPTMLKLLGLPKPAEMTGTSILVDPAH

Annotated regions:
phrase: VTKAIRDGEFFENPTICAAVDKAVDAGKAVHILGLLSDGGVHSHQDHLIAMAELAFKRGAEKIYLHAFLDGRDTPPKSAQSSIELLDETFKTLGKGRIASLIGRYFAMDRDNRWDRVAQAYNLIVDGQGQFNAATAQEGLQAAYAREESDEFVKATTIGEPVKVEDGDAVVFMNFRADRARELTRVFVEDDFKDFERPRQPKLAGFVMLTQY
type: DOMAIN
name: BPG-indep_PGM_N
description: BPG-independent PGAM, N-terminal

phrase: KPLVLMILDGFGHSESHESNAVYAAKKPVLDRLCASMPNGLISGSGMDVGLPDGQMGNSEVGHMNLGAGRVVYQDFTRVTKAIRDGEFFENPTICAAVDKAVDAGKAVHILGLLSDGGVHSHQDHLIAMAELAFKRGAEKIYLHAFLDGRDTPPKSAQSSIELLDETFKTLGKGRIASLIGRYFAMDRDNRWDRVAQAYNLIVDGQGQFNAATAQEGLQAAYAREESDEFVKATTIGEPVKVEDGDAVVFMNFRADRARELTRVFVEDDFKDFERPRQPKLAGFVMLTQYAASIPAPSAFAPGSLENVLGDYLAKNGKTQLRIAETEKYAHVTFFFSGGREEPFPGEERILIPSPKVATYDLQPEMSAPEVTDKIVDAIEHQRYDVIIVNYANGDMVGHSGVFEAAVKAVECLDLCVGRIVDALEKVGGEALITADHGNVEQMSDESTGQAHTAHTTEPVPFIYVGKRALKVREGGVLADVAPTMLKLLGL
type: DOMAIN
name: Metalloenzyme
description: Metalloenzyme
Protein sequence:
MITIKKGLDLPIAGVPTQVINDGKSITKVALLGEEYVGMRPTMHVRVEDVVKKGQVLFADKKNPGVVFTAPVSGKVVEINRGAKRVLQSVVIAVEGEEQVTFNSYAANELVSLDRETIKTQLVDSGAWTALRTRPFSKVPAIDSETKAIFVTAMDTNPLAADAEVIINQQEEAFVAGLDLLSVLTGDKVYVCKKGGSLPRSSQKNVEEHVFDGPHPAGLAGTHMHYLYPVDTNHVAWSIGYQDVIAFGQLFLTGEIYSERIVSLAGPAVNNPRLVRTITGASLVDLTDSEVMPGEVRVISGSVLNGTQAAGPHAYLGRYHQQVSVLREGREKELFGWAVPGKNKFSVTRSFLSHLFSGQLFNMTTTTNGSDRAMVPIGNYERVLPLDMEATMLLRDLCAGDVDSAQRLGALELDEEDLGLCTYVCPGKYEYGPMLREILDTIEKEG

Annotated regions:
phrase: IVSLAGPAVNNPRLVRTITGASLVDLTDSEVMPGEVRVISGSVLNGTQ
type: DOMAIN
name: NqrA_C_domain
description: Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain

phrase: ITIKKGLDLPIAGVPTQVINDGKSITKVALLGEEYVGMRPTMHVRVEDVVKKGQVLFADKKNPGVVFTAPVSGKVVEINRGAKRVLQSVVIAV
type: DOMAIN
name: NQRA_N
description: NqrA, N-terminal barrel-sandwich hybrid domain

phrase: LDRETIKTQLVDSGAWTALRTRPFSKVPAIDSETKAIFVTAMDTNPLAADAEVIINQQEEAFVAGLDLLSVLTGDKVYVCKKGGSLPRSSQKNVEEHVFDGPHPAGLAGTHMHYLYPVDTNHVAWSIGYQDVIAFGQLFLTGE
type: DOMAIN
name: NQRA_2nd
description: NqrA, second alpha/beta domain
Protein sequence:
MAEKRHTRDSEAQRLPDSFKDSPSKGLGPCGWILVAFSFLFTVITFPISIWMCIKIIKEYERAIIFRLGRILQGGAKGPGLFFILPCTDSFIKVDMRTISFDIPPQEILTKDSVTISVDGVVYYRVQNATLAVANITNADSATRLLAQTTLRNVLGTKNLSQILSDREEIAHNMQSTLDDATDAWGIKVERVEIKDVKLPVQLQRAMAAEAEASREARAKVIAAEGEMNASRALKEASMVITESPAALQLRYLQTLTTIAAEKNSTIVFPLPIDMLQGIIGAKHSHLG

Annotated regions:
phrase: KIIKEYERAIIFRLGRILQGGAKGPGLFFILPCTDSFIKVDMRTISFDIPPQEILTKDSVTISVDGVVYYRVQNATLAVANITNADSATRLLAQTTLRNVLGTKNLSQILSDREEIAHNMQSTLDDATDAWGIKVERVEIKDVKLPVQLQRAMAAEAEASREARAKVIAAEG
type: DOMAIN
name: Band_7
description: Band 7 domain

phrase: REEIAHNMQSTLDDATDAWGIKVERVEI
type: CONSERVED_SITE
name: Band_7/stomatin-like_CS
description: Band 7/stomatin-like, conserved site

phrase: MCIKIIKEYERAIIFRLGRILQGGAKGPGLFFILPCTDSFIKVDMRTISFDIPPQEILTKDSVTISVDGVVYYRVQNATLAVANITNADSATRLLAQTTLRNVLGTKNLSQILSDREEIAHNMQSTLDDATDAWGIKVERVEIKDVKLPVQLQRAMAAE
type: DOMAIN
name: Band_7
description: Band 7 domain
Protein sequence:
MTATIDNTQSQATTGGVGRVARVIGPVVDVEFAADELPEIYNALTVDVDFATASEQVEGETKRTLTLEVAQHIGDNMVRAISLQPTDGLVRGALVRDTGAPISVPVGDVTKGHVFNVLGQTLDVPRIEVTERWPIHRPAPAFDQLEAKTEMLETGIKVIDLLTPYVRGGKIGLFGGAGVGKTVLIQEMIHRVAKNFGGVSVFAGVGERTREGNDLFLEMTESGVINDTVLVFGQMDEPPGCRLRVGLAALTMAEYFRDVKRQDVLLFIDNIFRFVQAGSEVSTLLGRMPSAVGYQPTLADEMGALQERITSTRGHSITSVQAIYVPADDITDPAPHTTFTHLDATTVLSRPISEKGIYPAVDPLDSTSRILDPQFIGEEHFRVANQVKQILQRYKDLQDIIAILGIDELSEEDKVIVGRARRIERFLSQNMFVAEAFTGQPGSFVPLDETIDAFRRLCEGELDHLPEQAFFMCGGLDDVQAKAKRLAERS

Annotated regions:
phrase: RGGKIGLFGGAGVGKTVLIQEMIHRVAKNFGGVSVFAGVGERTREGNDLFLEMTESGVINDTVLVFGQMDEPPGCRLRVGLAALTMAEYFRDVKRQDVLLFIDNIFRFVQAGSEVSTLLGRMPSAVGYQPTLADEMGALQERITSTRGHSITSVQAIYVPADDITDPAPHTTFTHLDATTV
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: PQFIGEEHFRVANQVKQILQRYKDLQDIIAILGIDELSEEDKVIVGRARRIERFLSQNMFVAEAFTGQPGSFVPLDETIDAFRRLCEGE
type: DOMAIN
name: ATP-synt_VA_C
description: ATP synthase A/B type, C-terminal domain

phrase: PAVDPLDST
type: ACTIVE_SITE
name: ATPase_a/bsu_AS
description: ATPase, alpha/beta subunit, nucleotide-binding domain, active site

phrase: VARVIGPVVDVEFAADELPEIYNALTVDVDFATASEQVEGETKRTLTLEVAQHIGDNMVRAISLQPTDGLVRGALVRDT
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_N
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain

phrase: GIKVIDLLTPYVRGGKIGLFGGAGVGKTVLIQEMIHRVAKNFGGVSVFAGVGERTREGNDLFLEMTESGVINDTVLVFGQMDEPPGCRLRVGLAALTMAEYFRDVKRQDVLLFIDNIFRFVQAGSEVSTLLGRMPSAVGYQPTLADEMGALQERITSTRGHSITSVQAIYVPADDITDPAPHTTFTHLDATTVLSRPISEKGIYPAVDPLDST
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_nucl-bd
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain
Protein sequence:
MTTPSRIVTPERRVDDVGDTALRPQLLSEFVGQQQARANLQIFIDAARKRGEALDHVLFVGPPGLGKTTLAQIVARELGVGFRATSGPVIAKAGDLAALLTNLEERDVLFIDEIHRLSPAVEEVLYPAMEDFQLDLIIGEGPAARSVKIELSKFTLVGATTRAGLLTNPLRDRFGIPVRLNFYTIAELESIVTRGARVLSIGITPDGANEIARRARGTPRIAGRLLRRVRDFASAADKSAIDRGIADHALSALEVDAAGLDAMDRRYLSTIAMNYGGGPVGVETMAAALSEPRDAIEDIIEPFLIQCGYLQRTPRGRLLTSHAFKHLGLAEPARDAAQFGLFGQGGEEG

Annotated regions:
phrase: ALDHVLFVGPPGLGKTTLAQIVARELGVGFRATSGPVIAKAGDLAALLTNLEERDVLFIDEIHRLSPAVEEVLYPAMEDFQLDLIIGEGPAARSVKIELSKFTLVGATTRAGLLTNPLRDRFGIPVR
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: AGLDAMDRRYLSTIAMNYGGGPVGVETMAAALSEPRDAIEDIIEPFLIQCGYLQRTPRGRLLTSHAFKH
type: DOMAIN
name: RuvB_C
description: RuvB C-terminal winged helix domain

phrase: LRPQLLSEFVGQQQARANLQIFIDAARKRGEALDHVLFVGPPGLGKTTLAQIVARELGVGFRATSGPVIAKAGDLAALLTNLEERDVLFIDEIHRLSPAVEEVLYPAMEDFQLDLIIGEGPAARSVKIELSKFTLVGATTRAGLLTNPLRDRFGIPVR
type: DOMAIN
name: RuvB-like_N
description: RuvB-like P-loop domain

phrase: YTIAELESIVTRGARVLSIGITPDGANEIARRARGTPRIAGRLLRRVRDFASAADKSAIDRGIADHALSALEV
type: DOMAIN
name: AAA_lid_4
description: RuvB, AAA lid domain
Protein sequence:
MIFSTLEHILTHISFSVVSIVISIHLITLFVNQIVGFYDSSKKGMIITFLCITGLLITRWFFSGHLPFSDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTEMHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKRLSFLYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGFLIIWICYFGVNLLGIGLHNYGSFTSN

Annotated regions:
phrase: SDLYESLIFLSWGFSIFYMVPRFKKQKNDLSTIIAPSVIFTQGFATSGLLTEMHQSVILVPALQSHWLMMHVSMMILGYAALLCGSLLSVAILVITFQELIPILGKSKRLSFLYESFDYAEIKYINMNERNNVLRKTSFSSYRNYYRYQFIQQLDRWGYRIISLGFIFLTIGILSGAVWANEAWGSYWNWDPKETWAFITWTIFAIYLHSRKNKKLEGLNSSIVASIGFLIIWICYFGVNLLGIGL
type: DOMAIN
name: Cyt_c_assembly
description: Cytochrome c assembly protein
Protein sequence:
MASGHSLLLENAQQVVLVCARGERFLARDALRSLAVLEGASLVVGKDGFIKAIGPADVIQRQFSGETFEEIIDCSGKCILPGLVDAHTHPVWAGERVHEFAMKLAGATYMEIHQAGGGIHFTVERTRQATEEELFRSLQQRLQCMMRAGTTLVECKSGYGLDLETELKMLRVIERARRELDIGISATYCGAHSVPKGKTATEAADDIINNHLPKLKELGRNGEIHVDNIDVFCEKGVFDLDSTRRILQRGKDIGLQINFHGDELHPMKAAELGAELGAQAISHLEEVSDEGIVAMATARCSAILLPTTAYMLRLKQPRARKMLDEGVIVALGSDFNPNAYCFSMPMVMHLACVNMRMSMPEALAAATINAAYALGKSHTHGSLEVGKQGDLIIINSSRWEHLIYQFGGHHELIEYVIAKGKLIYKT

Annotated regions:
phrase: ILPGLVDAHTHPVWAGERVHEFAMKLAGATYMEIHQAGGGIHFTVERTRQATEEELFRSLQQRLQCMMRAGTTLVECKSGYGLDLETELKMLRVIERARRELDIGISATYCGAHSVPKGKTATEAADDIINNHLPKLKELGRNGEIHVDNIDVFCEKGVFDLDSTRRILQRGKDIGLQINFHGDELHPMKAAELGAELGAQAISHLEEVSDEGIVAMATARCSAILLPTTAYMLRLKQPRARKMLDEGVIVALGSDFNPNAYCFSMPMVMHLACVNMRMSMPEALAAATINAAYALGKSHTHGSLEVGKQGDLIIINSSRWEHLIYQFGGHHELIEYVIAKG
type: DOMAIN
name: Amidohydro-rel
description: Amidohydrolase-related
Protein sequence:
MTNIVHKLTNSDIQQLMSKIPFETSQLSQGMKAKTKYKGTSISIYNSNKVMFQGKDAERIAAQLLPNVTKSQPSSKKASTTKQTISYNQFQCIGSDEAGSGDYFGPLTVCAAYVSHKNVQILKALGVDDSKKLTDTKIVELAEQLVTFIPHSLLVMNNEKYNEKQKAGWSQVKMKAVLHNEAIKNVTQKIDTTELDYIVIDQFAEAGVYKRYALSDLPFSNKTKFETKGESKSIAIAAASIISRYAFVKHMDRLTQSVKTDIPKGASNKVDLTAAKIIERKGIAYLDSISKKHFANRKKAENLVQKKYND

Annotated regions:
phrase: IVHKLTNSDIQQLMSKIPFETSQLSQGMKAKTKYKGTSISIYNSNKVMFQGKDAERIAAQLLP
type: DOMAIN
name: RNase_HIII_N
description: Ribonuclease HIII, N-terminal

phrase: NIVHKLTNSDIQQLMSKIPFETSQLSQGMKAKTKYKGTSISIYNSNKVMFQGKDAERIAAQLLPNVTKSQPSS
type: DOMAIN
name: RNase_HIII_N
description: Ribonuclease HIII, N-terminal

phrase: FQCIGSDEAGSGDYFGPLTVCAAYVSHKNVQILKALGVDDSKKLTDTKIVELAEQLVTFIPHSLLVMNNEKYNEKQKAGWSQVKMKAVLHNEAIKNVTQKIDTTELDYIVIDQFAEAGVYKRYALSDLPFSNKTKFETKGESKSIAIAAASIISRYAFVKHMDRLTQSVKTDIPKGASNKVDLTAAKIIERKGIAYLDSISKKHFANRKKAENLVQ
type: DOMAIN
name: RNase_HII/HIII_dom
description: Ribonuclease HII/HIII domain

phrase: IGSDEAGSGDYFGPLTVCAAYVSHKNVQILKALGVDDSKKLTDTKIVELAEQLVTFIPHSLLVMNNEKYNEKQKAGWSQVKMKAVLHNEAIKNVTQKIDTTELDYIVIDQFAEAGVYKRYALSDLPFSNKTKFETKGESKSIAIAAASIISRYAFVKHMDRLTQSVKTDIPKGASNKVDLTAAKIIERKGIAYLDSISKKHFA
type: DOMAIN
name: RNase_HII/HIII_dom
description: Ribonuclease HII/HIII domain
Protein sequence:
MTLTASSSSRAVTNSPVVVALDYHNRDAAMAFIDKIDPRDCRLKVGKEMFTLFGPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASGGARMMAAAREALVPFGKDAPLLIAVTVLTSMEASDLADLGVTLSPADYAERLAALTQKCGLDGVVCSAQEAVRFKQVFGQEFKLVTPGIRPQGSDAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKAINASLQRSA

Annotated regions:
phrase: PVVVALDYHNRDAAMAFIDKIDPRDCRLKVGKEMFTLFGPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASGGARMMAAAREALVPFGKDAPLLIAVTVLTSMEASDLADLGVTLSPADYAERLAALTQKCGLDGVVCSAQEAVRFKQVFGQEFKLVTPGIRPQGSDAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKA
type: DOMAIN
name: OMPdeCOase_dom
description: Orotidine 5'-phosphate decarboxylase domain

phrase: PVVVALDYHNRDAAMAFIDKIDPRDCRLKVGKEMFTLFGPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASGGARMMAAAREALVPFGKDAPLLIAVTVLTSMEASDLADLGVTLSPADYAERLAALTQKCGLDGVVCSAQEAVRFKQVFGQEFKLVTPGIRPQGSDAGDQRRIMTPEQALSAGVDYMVIGRPVTQSVDPAQTLKA
type: DOMAIN
name: OMPdeCOase_dom
description: Orotidine 5'-phosphate decarboxylase domain

phrase: IFLDLKFHDIPNT
type: ACTIVE_SITE
name: OMPdecase_AS
description: Orotidine 5'-phosphate decarboxylase, active site
Protein sequence:
MKQITIASRESKLALWQTNFVKNRIQSELNIPCEISTMKTQGDIILDQPLNKIGGKALFMKELEIAMLNNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPKGAIVGTSSLRRKAQLLHYRDDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELVERITQFIPVEISLPAVGQGIVVIEALERDNDLLEKIQKLNCRESSRVATAERAFNQELKGGCHVAIGAYAELDNNQITLMAMVASSDGKKILKRKMIGDDPTKLGKLLAQEMIALGAYKILES

Annotated regions:
phrase: ERAFNQELKGGCHVAI
type: BINDING_SITE
name: Porphobilin_deaminase_cofac_BS
description: Porphobilinogen deaminase, dipyrromethane cofactor binding site

phrase: ATAERAFNQELKGGCHVAIGAYAELDNNQITLMAMVASSDGKKILKRKMIGDDPTKLGKLLAQEM
type: DOMAIN
name: Porphobilinogen_deaminase_C
description: Porphobilinogen deaminase, C-terminal

phrase: ITIASRESKLALWQTNFVKNRIQSELNIPCEISTMKTQGDIILDQPLNKIGGKALFMKELEIAMLNNKADIAVHSLKDVPYQLPQGFCLAGFMPREDPRDAFVSNKYNSIDDLPKGAIVGTSSLRRKAQLLHYRDDLEIRDLRGNVQTRLSKLDNGDYDAIILASAGLIRLELVERITQFIPVEISLPAVGQGIVVIEALERDNDL
type: DOMAIN
name: Porphobilin_deaminase_N
description: Porphobilinogen deaminase, N-terminal
Protein sequence:
MAVSGFTLGTCILLLHISYVANYPNGKVTQSCHGMIPEHGHSPQSVPVHDIYVSQMTFRPGDQIEVTLSGHPFKGFLLEARNAEDLNGPPIGSFTLIDSEVSQLLTCEDIQGSAVSHRSASKKTEIKVYWNAPSSAPNHTQFLVTVVEKYKIYWVKIPGPIISQPNAFPFTTPKATVVPLPTLPPVSHLTKPFSASDCGNKKFCIRSPLNCDPEKEASCVFLSFTRDDQSVMVEMSGPSKGYLSFALSHDQWMGDDDAYLCIHEDQTVYIQPSHLTGRSHPVMDSRDTLEDMAWRLADGVMQCSFRRNITLPGVKNRFDLNTSYYIFLADGAANDGRIYKHSQQPLITYEKYDVTDSPKNIGGSHSVLLLKVHGALMFVAWMTTVSIGVLVARFFKPVWSKAFLLGEAAWFQVHRMLMFTTTVLTCIAFVMPFIYRGGWSRHAGYHPYLGCIVMTLAVLQPLLAVFRPPLHDPRRQMFNWTHWSMGTAARIIAVAAMFLGMDLPGLNLPDSWKTYAMTGFVAWHVGTEVVLEVHAYRLSRKVEILDDDRIQILQSFTAVETEGHAFKKAVLAIYVCGNVTFLIIFLSAINHL

Annotated regions:
phrase: DGRIYKHSQQPLITYEKYDVTDSPKNIGGSHSVLLLKVHGALMFVAWMTTVSIGVLVARFFKPVWSKAFLLGEAAWFQVHRMLMFTTTVLTCIAFVMPFIYRGGWSRHAGYHPYLGCIVMTLAVLQPLLAVFRPPLHDPRRQMFNWTHWSMGTAARIIAVAAMFLGMDLPGLNLPDSWKTYAMTGFVAWHVGTEVVLEV
type: DOMAIN
name: Cyt_b561/ferric_Rdtase_TM
description: Cytochrome b561/ferric reductase transmembrane

phrase: ASCVFLSFTRDDQSVMVEMSGPSKGYLSFALSHDQWMGDDDAYLCIHEDQTVYIQPSHLTGRSHPVMDSRDTLEDMAWRLADGVMQCSFRRNITLPGVKNRFDLNTSYYIFLAD
type: DOMAIN
name: DOMON_domain
description: DOMON domain

phrase: SCHGMIPEHGHSPQSVPVHDIYVSQMTFRPGDQIEVTLSGHPFKGFLLEARNAEDLNGPPIGSFTLIDSEVSQLLTCEDIQGSAVSHRSASKKTEIKVYWNAPSSAPNHTQFLVTVVEKYKIYWVKIPGPII
type: DOMAIN
name: Reeler_dom
description: Reeler domain

phrase: CHGMIPEHGHSPQSVPVHDIYVSQMTFRPGDQIEVTLSGHPFKGFLLEARNAEDLNGPPIGSFTLIDSEVSQLLTCEDIQGSAVSHRSASKKTEIKVYWNAPSSAPNHTQFLVTVVEKYKIYW
type: DOMAIN
name: Reeler_dom
description: Reeler domain

phrase: LLLHISYVANYPNGKVTQSCHGMIPEHGHSPQSVPVHDIYVSQMTFRPGDQIEVTLSGHPFKGFLLEARNAEDLNGPPIGSFTLIDSEVSQLLTCEDIQGSAVSHRSASKKTEIKVYWNAPSSAPNHTQFLVTVVEKYKIYWVKIPGPIISQPNAFPFTTPKATVV
type: DOMAIN
name: Reeler_dom
description: Reeler domain

phrase: VHGALMFVAWMTTVSIGVLVARFFKPVWSKAFLLGEAAWFQVHRMLMFTTTVLTCIAFVMPFIYRGGWSRHAGYHPYLGCIVMTLAVLQPLLAVFRPPLHDPRRQMFNWTHWSMGTAARIIAVAAMFLG
type: DOMAIN
name: Cyt_b561/ferric_Rdtase_TM
description: Cytochrome b561/ferric reductase transmembrane

phrase: EASCVFLSFTRDDQSVMVEMSGPSKGYLSFALSHDQWMGDDDAYLCIHEDQTVYIQPSHLTGRSHPVMDSRDTLEDMAWRLADGVMQCSFRRNITLPGVKNRFDLNTSYYIFLAD
type: DOMAIN
name: DOMON_domain
description: DOMON domain

phrase: YLSFALSHDQWMGDDDAYLCIHEDQTVYIQPSHLTGRSHPVMDSRDTLEDMAWRLADGVMQCSFRRNITLPGVKNRFDLNTSYYIFLAD
type: DOMAIN
name: DOMON_domain
description: DOMON domain
Protein sequence:
MKYRRVLLKLSGEALMGDREFGIDPEVVKSLAGEIARVVEAGTELAVVVGGGNIFRGVKASSSGMDRATADYVGMLATVMNALTLQDALEQQFQVQTRLLSAIEMKEVAEPFIRRRAMRHLEKGRVVIFGAGSGNPFFTTDTTAALRAAEIDAQVIFKATRVDGIYDSDPKFNPQAVRFEKITFHEVLVQNLRVMDSTAIALCRENNIPILVFNVFEKNSIYRAVQGEAVGTYVC

Annotated regions:
phrase: RVLLKLSGEALMGDREFGIDPEVVKSLAGEIARVVEAGTELAVVVGGGNIFRGVKASSSGMDRATADYVGMLATVMNALTLQDALEQQFQVQTRLLSAIEMKEVAEPFIRRRAMRHLEKGRVVIFGAGSGNPFFTTDTTAALRAAEIDAQVIFKATRVDGIYDSDPKFNPQAVRFEKITFHEVLVQNLRVMDSTAIALCRENNIPILVF
type: DOMAIN
name: Asp/Glu/Uridylate_kinase
description: Aspartate/glutamate/uridylate kinase
Protein sequence:
MEGPEIQFSEAVIDNGRFGKRVIRFETGRLAKQAAGAAMVYIDEDTALLSATTAGKHPREGFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTEAILACRLMDRPLRPAFIKGLRNEVQIVVTVLAINPDELYDVVAINASSMSTQLSGLPFSGPIGGVRVALVADEHGSQWVAFPKHSQLENSVFNMVVAGRVAGDDVAIMMVEAEATDNSWNLIKEQGATAPTEEVVSEGLEAAKPFIKALCDAQADLAARAAKPTVEFPVFLDYEDDAYAAVEAAAAEKLAAVFQIADKQERDAASDQLKDDVTSSLAGQFEGREKELSAAFRSVTKHVVRQRILKDQIRIDGRGLTDIRQLTAEVEVLPRVHGSAIFERGETQIMGVTTLNMLKMEQQIDSLSPVTRKRYMHNYNFPPYSTGETGRVGSPKRREIGHGALAERALVPVLPSREEFPYAIRQVSEALSSNGSTSMGSVCASTLSMLNAGVPLKAAVAGIAMGLVSDQVDGQTRYAALTDILGAEDAFGDMDFKVAGTSEFVTAIQLDTKLDGIPASVLAAALKQAREARLHILEVINSAIDTPDELSEFAPRVIAVKIPVDKIGEVIGPKGKMINQIQEDTGADISIEDDGTVYIGATNGPSADAARSAINAIANPQVPEIGERYLGTVVKTTTFGAFISLTPGKDGLLHISELRKIAGGKRVDNVEDVVSVGQKIQVEITKIDDRGKLSLSPVIAEEEGAENAEVAEAAAE

Annotated regions:
phrase: AVKIPVDKIGEVIGPKGKMINQIQEDTGADISIEDDGTVYIGATNGPSADAARSA
type: DOMAIN
name: KH_dom_type_1
description: K Homology domain, type 1

phrase: APRVIAVKIPVDKIGEVIGPKGKMINQIQEDTGADISIEDDGTVYIGATNGPSADAARSAINAIA
type: DOMAIN
name: KH_dom
description: K Homology domain

phrase: RVIRFETGRLAKQAAGAAMVYIDEDTALLSATTAGKHPREGFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTEAILACRLMDRPLRPAFIKGLRNEVQIVVTVLAINPDELYDVVAINASSMSTQLSGL
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1

phrase: IRQLTAEVEVLPRVHGSAIFERGETQIMGVTTLNMLKMEQQIDSLSPVTRKRYMHNYNFPPYSTGETGRVGSPKRREIGHGALAERALVPVLPSREEFPYAIRQVSEALSSNGSTSMGSVCASTLSMLNAGV
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1

phrase: GERYLGTVVKTTTFGAFISLTPGKDGLLHISELRKIAGGKRVDNVEDVVSVGQKIQVEITKIDDRGKLSLSP
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: AAVEAAAAEKLAAVFQIADKQERDAASDQLKDDVTSSLAGQFEGREKELSAAFRSVTKHVVRQRILKDQIRIDG
type: DOMAIN
name: PNPase_PH_RNA-bd_bac/org-type
description: Polyribonucleotide nucleotidyltransferase, RNA-binding domain

phrase: PEIGERYLGTVVKTTTFGAFISLTPGKDGLLHISELRKIAGGKRVDNVEDVVSVGQKIQVEITKIDDRGKLSL
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: EIGERYLGTVVKTTTFGAFISLTPGKDGLLHISELRKIAGGKRVDNVEDVVSVGQKIQVEITKIDDRGKLSLSP
type: DOMAIN
name: S1_domain
description: S1 domain
Protein sequence:
MKTLIHNDWQTVLEPVFESPEYAQLHAFLKEEYATKTIYPEMHHIFQAFEWTPFHDVKVVILGQDPYHNPRQAVGASFAVAPGVALPPSLQNIYKELQSDLGYPPVHHGYLKAWADQGVLLLNAVLTVQAGEAYSHQNHGWEELTDAAIAALSARGGVVFILWGNAAKKKAAVIDTSKNAIIASAHPSPLSASRGFFGSRPFSRTNAALEKMGEAPINWQLPETVKAD

Annotated regions:
phrase: KVVILGQDP
type: ACTIVE_SITE
name: Ura-DNA_Glyclase_AS
description: Uracil-DNA glycosylase, active site

phrase: EWTPFHDVKVVILGQDPYHNPRQAVGASFAVAPGVALPPSLQNIYKELQSDLGYPPVHHGYLKAWADQGVLLLNAVLTVQAGEAYSHQNHGWEELTDAAIAALSARGGVVFILWGNAAKKKAAVIDTSKNAIIASAHPSPLSASRGFFGSRPFSRTNAA
type: DOMAIN
name: Uracil-DNA_glycosylase-like
description: Uracil-DNA glycosylase-like

phrase: FHDVKVVILGQDPYHNPRQAVGASFAVAPGVALPPSLQNIYKELQSDLGYPPVHHGYLKAWADQGVLLLNAVLTVQAGEAYSHQNHGWEELTDAAIAALSARGGVVFILWGNAAKKKAAVIDTSKNAIIASAHPSPLSASRGFFGSRPFSRTNAA
type: DOMAIN
name: Uracil-DNA_glycosylase-like
description: Uracil-DNA glycosylase-like
Protein sequence:
MTDIKKVNLLGLSPEKLIEFFESIGEKKFRATQVIKWIHQKGAESFEEMTDVSKALRAKLEQICEIRGPEVVSQNISTDGTRKWIIRTEGGKNDCVETVLIPDGDRATLCVSSQVGCSLDCSFCSTGKQGFNRNLTPAEIIGQVWIAIKSFGPMDPNGPRRVTNVVMMGMGEPLMNFEPVVDAMILMMHDHAYGLSKRRVTLSTSGVVPKIYELVKRTDVSLAISLHAPNDALRNELVPINKKYPIAELLEACQFYLENLPDKRHITIEYTLMSGVNDNEEQAHELAELLKVLECKINLIPFNPFPHSGYEKPSNNRTRRFQKILADAGYTVTVRTTRGDDIDAACGQLVGDFHDKTRRSQKYIELREVKS

Annotated regions:
phrase: VNLLGLSPEKLIEFFESIGEKKFRATQVIKWIHQKGAESFEEMTDVSKALRAKLEQICE
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: ATLCVSSQVGCSLDCSFCSTGKQGFNRNLTPAEIIGQVWIAIKSFGPMDPNGPRRVTNVVMMGMGEPLMNFEPVVDAMILMMHDHAYGLSKRRVTLSTSGVVPKIYELVKRTDVSLAISLHAPNDALRNELVPINKKYPIAELLEACQFYLENLPDKRHITIEYTLMSGVNDNEEQAHELAELLKVLECKINLIPFNPFPHSGYEKPSNNRTRRFQKILA
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: SSQVGCSLDCSFCSTGKQGFNRNLTPAEIIGQVWIAIKSFGPMDPNGPRRVTNVVMMGMGEPLMNFEPVVDAMILMMHDHAYGLSKRRVTLSTSGVVPKIYELVKRTDVSLAISLHAPNDALRNELVPINKKYPIAELLEACQFYLENLPDKRHITIEYTLMSGVNDNEEQAHE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: KKVNLLGLSPEKLIEFFESIGEKKFRATQVIKWIHQKGAESFEEMTDVSKALRAKLEQICEIRGPEVVSQNISTDGTRKWIIRTEGGKNDCVETVLIPDGDRATLCVSSQVGCSLDCSFCSTGKQGFNRNLTPAEIIGQVWIAIKSFGPMDPNGPRRVTNVVMMGMGEPLMNFEPVVDAMILMMHDHAYGLSKRRVTLSTSGVVPKIYELVKRTDVSLAISLHAPNDALRNELVPINKKYPIAELLEACQFYLENLPDKRHITIEYTLMSGVNDNEEQAHELAELLKVLECKINLIPFNPFPHSGYEKPSNNRTRRFQKILADAGYTVTVRTTRGDDIDAACGQLVGDFHDKTRRSQ
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: DGDRATLCVSSQVGCSLDCSFCSTGKQGFNRNLTPAEIIGQVWIAIKSFGPMDPNGPRRVTNVVMMGMGEPLMNFEPVVDAMILMMHDHAYGLSKRRVTLSTSGVVPKIYELVKRTDVSLAISLHAPNDALRNELVPINKKYPIAELLEACQFYLENLPDKRHITIEYTLMSGVNDNEEQAHELAELLKVLECKINLIPFNPFPHSGYEKPSNNRTRRFQKILADAGYTVTVRTTRGD
type: DOMAIN
name: rSAM
description: Radical SAM