nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MNSITAIIVAAGRGTRAGSGVPKQYRKIGQKPILQHTIESLLSHKAISEIVCVIHEDDTKLYMNMVTKINDNKLSEPVHGGATRSESVFEGIKAASSDYVLIHDGARPCLPIDALDRIITGLEDNDACFLALPVADTLWSITKDKIQKNIPRNMIWKAQTPQAFKLNQIYNAYKNADMSATDDVAIAQSAGIEVKPILGTERNIKITTLEDFDLAKQILGNTMDIRVGNGFDVHALGAGSQVVLNGIEIAHTNALMGHSDADVAMHAITDAIFGALSEGDIGQWFPPSDQKWKNASSDIFLRKAVLLCSEREFYINHIDCTIICETPKIGPYAKKMCENISRITNVNVENISIKATTTEKLGFTGRNEGIAAQATATLIRK

Annotated regions:
phrase: TLEDFDLAKQILGNTMDIRVGNGFDVHALGAGSQVVLNGIEIAHTNALMGHSDADVAMHAITDAIFGALSEGDIGQWFPPSDQKWKNASSDIFLRKAVLLCSEREFYINHIDCTIICETPKIGPYAKKMCENISRITNVNVENISIKATTTEKLGFTGRNEGIAAQATATLIR
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: IRVGNGFDVHALGAGSQVVLNGIEIAHTNALMGHSDADVAMHAITDAIFGALSEGDIGQWFPPSDQKWKNASSDIFLRKAVLLCSEREFYINHIDCTIICETPKIGPYAKKMCENISRITNVNVENISIKATTTEKLGFTGRNEGIAAQATAT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: IRVGNGFDVHALGAGSQVVLNGIEIAHTNALMGHSDADVAMHAITDAIFGALSEGDIGQWFPPSDQKWKNASSDIFLRKAVLLCSEREFYINHIDCTIICETPKIGPYAKKMCENISRITNVNVENISIKATTTEKLGFTGRNEGIAAQATATLI
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RVGNGFDVHALGAGSQVVLNGIEIAHTNALMGHSDADVAMHAITDAIFGALSEGDIGQWFPPSDQKWKNASSDIFLRKAVLLCSEREFYINHIDCTIICETPKIGPYAKKMCENISRITNVNVENISIKATTTEKLGFTGRNEGIAAQATATL
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RVGNGFDVHALGAGSQVVLNGIEIAHTNALMGHSDADVAMHAITDAIFGALSEGDIGQWFPPSDQKWKNASSDIFLRKAVLLCSEREFYINHIDCTIICETPKIGPYAKKMCENISRITNVNVENISIKATTTEKLGFTGRNEGIAAQATAT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: VLIHDGA
type: CONSERVED_SITE
name: ISPD_synthase_CS
description: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site

phrase: SDADVAMHAITDAIF
type: CONSERVED_SITE
name: MECDP_synthase_CS
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site
Protein sequence:
MAGVNRSFSYSRGDDALLRDDEREISPLRSAEDGLYSTSYGDVSPLSAGVQAQNRPFDRGLVSVPEGQTLERHMTSTPGMDNLGPASVGGGISGIALGVANSHNRQSGVDAFRETDVPVRNLPAERDFNTTGSDNPYIPAPPDGDIYPSSEAVRYRDSYSSHTGLGAGAPFAEHSTPGTTPSQRSFFDSPYQGVDAGPYQRHSAYSSHDYPLVINPDDIADDGDDGFPVHPKGAADYRSNANVPGTGVAGAAAAGGFLGKFRALFKREEPSPFYDSDIGGGLGGAEKAQGGRHIIGGGSRKRGWIVGLILAAVIVAAIVGGAVGGILGHQEHDGDTSSSSSSSSSSGTGSGGSDKGDGLLDKDSDEIKALMNNKNLHKVFPGVDYTPWGVQYPLCLQYPPSQNNVTRDLAVLTQLTNTIRLYGTDCNQTEMVLEAIDRLQLTNMKLWLGVWIDTNTTTTDRQISQLYKIVENANDTSIFKGAIVGNEALYRAGSDVASAETNLIGYINDVKDHFKDKNIDLPVGTSDLGDNWNAQLVSAADFVMSNIHPFFGGVEIDDAASWTWTFWQTHDTPLTAGTNKQQIISEVGWPTGGGNDCGSDNKCQNDKQGAVAGIDELNQFLSEWVCQALDNGTEYFWFEAFDEPWKVQYNTPGQEWEDKWGLMDSARNLKPGVKIPDCGGKTIT

Annotated regions:
Protein sequence:
MMQQPPPASNGAATGPGQIPSDQQAYLQQQQSWMMQHQQQQQGQPPAGWNQQSAPSSGQPQQQQYGGGGSQNPGSAGEIRSLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATAERNLQTYNGAPMPSSEQAFRLNWAQLGAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSSRPMRTGPAANKKPLTMQPASYQNTQGNSGESDPTNTTIFVGAVDQSVTEDDLKSVFGQFGELVHVKIPAGKRCGFVQYANRACAEQALSVLNGTQLGGQSIRLSWGRSPSNKQTQPDQAQYGGGGGYYGYPPQGYEAYGYAPPPQDPNAYYGGYAGGGYGNYQQPGGYQQQQQ

Annotated regions:
phrase: TTIFVGAVDQSVTEDDLKSVFGQFGELVHVKIPAGKRCGFVQYANRACAEQALSVLNGTQLGGQSIRLSWGR
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: TVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSSRPMRT
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: SLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATAERNLQTYNGAPMPSSEQAFRL
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: TIFVGAVDQSVTEDDLKSVFGQFGELVHVKIPAGKRCGFVQYANRACAEQALSVLNGTQLGGQSIRL
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: IFVGAVDQSVTEDDLKSVFGQFGELVHVKIPAGKRCGFVQYANRACAEQALSVLNGTQLGGQSI
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: VFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSSRP
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: LWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATAERNLQTYNGAP
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: RSLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYSEGYGFIEFVNHATAERNLQTYNGAPMPSSEQAFRLNWAQ
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: HTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQYCSSRPMRTGPAA
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain
Protein sequence:
MVKKVTQDNIQSKLALVMRSGKATLGYKSTIKAIRNGTAKLVFISNNCPTVRKSEIEYYASLAQISIHHFVGSNVELGTACGKYHRCSTMAILDAGDSDILKTE

Annotated regions:
phrase: ELGTACGKYHRCSTMAILDA
type: CONSERVED_SITE
name: Ribosomal_eL30_CS
description: Large ribosomal subunit protein eL30, conserved site

phrase: DNIQSKLALVMRSGKATLGYKSTIKAIRNGTAKLVFISNNCPTVRKSEIEYYASLAQISIHHFVGSNVELGTACGKYHRCSTMAILDAGDSDI
type: DOMAIN
name: Ribosomal_eL8/eL30/eS12/Gad45
description: Ribosomal protein eL8/eL30/eS12/Gadd45
Protein sequence:
MEVQQEVSVLPPLKDRSTLSNEEILRYSRQLLLPELGVQGQLQLVRTSVLVVGCGGLGCPLAQYLAAAGIGRLGLLDYDEVELSNLHRQVLHGEDMLGVSKAQSAAQAVRRLNSSVQCVPYHLQLTPENALQLMVSLMYDIVADCSDNVPTRYLVNDACVLSGKPLVSASALRIEGQLTVYNYHGGPCYRCLYPVPPPTETVTNCSDGGVLGVVPGIMGCFQALEVLKIASSKTSSCHQQLLMFDALTTRFRSIRLRPRQMGCAVCGDNPTVTGLQDYEKFCGSAATDKCRRLCLLSKDQRISVQEYQDIVGRQALHILLDVRPLVEVDICQLPFSLNIPLASLENRKSEHIQLLKDKIMEIKQLMNTEMPVPVYVICKMGNDSQKAVQVLEQMSGTEVENVTAKDVIGGLMAWAQKIDPSFPQY

Annotated regions:
phrase: ISVQEYQDIVGRQALHILLDVRPLVEVDICQLPFSLNIPLASLENRKSEHIQLLKDKIMEIKQLMNTEMPVPVYVICKMGNDSQKAVQVLEQMSGTEVENVTAKDVIGGLMAWAQKID
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain

phrase: VQEYQDIVGRQALHILLDVRPLVEVDICQLPFSLNIPLASLENRKSEHIQLLKDKIMEIKQLMNTEMPVPVYVICKMGNDSQKAVQVLEQMSGTEVENVTAKDVIGGLMAWA
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain

phrase: YSRQLLLPELGVQGQLQLVRTSVLVVGCGGLGCPLAQYLAAAGIGRLGLLDYDEVELSNLHRQVLHGEDMLGVSKAQSAAQAVRRLNSSVQCVPYHLQLTPENALQLMVSLMYDIVADCSDNVPTRYLVNDACVLSGKPLVSASALRIEGQLTVYNYHGGPCYRCLYPVPPPTETVTNCSDGGVLGVVPGIMGCFQALEVLKIASSKTSSCHQQLLMFDALTTRFRSIRLRPRQMGC
type: DOMAIN
name: ThiF_NAD_FAD-bd
description: THIF-type NAD/FAD binding fold

phrase: HILLDVRPLVEVDICQLPFSLNIPLASLENRKSEHIQLLKDKIMEIKQLMNTEMPVPVYVICKMGNDSQKAVQVLEQMSGTEVENVTAKDVIGGLMAWAQKIDPSF
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain
Protein sequence:
MGASVSKSSSGEHENALIAESGSSIKFTNINYYNDSCASASSVASLQQDPSKFTQPVVDALKAGEVMMKSPSAEECGYSDRVQQLVLGNTAITTQEAANVVVGYGKWPENLSSKDATAIDAPTFPDTAVNRFYTFDSVLWSAQSNGWYYRLPGSMLDFGLFGQNMQYHYLMRTGYAIHVQCNASKFHQGALLVAVIPEMQTDNPEGSVDTGILTPLDGATNLKFDESLEPEQLTIFPHQWINLRTNNTATIIMPYANSVPMDNGLIHNNCTLVILPVAGLQYSTGATVVVPITVTIAPMCSEYNGLRFAITNAHTQGLPVRNLPGSRQFLTTDIYSAPPAIPYFDPSPEIDIPGEVKNLLELAKVDTIMPFQDTNKKWRLNLEVSVQTSVGQKLTEFEVGPTTGEAWQKTLLGALLKFYTHWTGSIKLSFMFCGTAMTTGKFLICYTPPAGRAPQSRQEAMLGTNLIWDIGLQSTATLVIPWIAASHYRLNGKTNSEGRVGLYSTSGRITIFYQTNIVVPPDCPTTAKIVLLVSACDDFVMRIPLDSAYQQGPNPVGNALNKEINKVTQSLSAMSIDETGSSVHPDSAPGLNAQETGATSTTEPEQMMETRAVMNNHSQRETTLENFFSRAALVQIMTFVYGKDTAAANNDYTSWVIDLRNATYTVFRRKIEMFTYMRFDLEIIALFTVTPKNAESGYFPNLEYQVMYVPPGAQTPTSSVDKPWQTATNPSVFTRQGDPPVSFSIPFLSVANAYSMFYDGYSNFNDVG

Annotated regions:
phrase: DPSPEIDIPGEVKNLLELAKVDTIMPFQDTNKKWRLNLEVSVQTSVGQKLTEFEVGPTTGEAWQKTLLGALLKFYTHWTGSIKLSFMFCGTAMTTGKFLICYTPPAGRAPQSRQEAMLGTNLIWDIGLQSTATLVIPWIAASHYRLNGKT
type: DOMAIN
name: Picornavirus_capsid
description: Picornavirus capsid

phrase: TTQEAANVVVGYGKWPENLSSKDATAIDAPTFPDTAVNRFYTFDSVLWSAQSNGWYYRLPGSMLDFGLFGQNMQYHYLMRTGYAIHVQCNASKFHQGALLVAVIPEMQTDNPEGSVDTGILTPLDGATNLKFDESLEPEQLTIFPHQWINLRTNNTATIIMPYANSVPMDNGLIHNNCTLVILPVAGLQ
type: DOMAIN
name: Picornavirus_capsid
description: Picornavirus capsid

phrase: LENFFSRAALVQIMTFVYGKDTAAANNDYTSWVIDLRNATYTVFRRKIEMFTYMRFDLEIIALFTVTPKNAESGYFPNLEYQVMYVPPGAQTPTSSVDKPWQTATNPSVFTRQGDPPVSFSIPFLSVANAYSMFYDGYSNFNDV
type: DOMAIN
name: Rhv-like
description: Picornavirus/Calicivirus coat protein

phrase: QTSVGQKLTEFEVGPTTGEAWQKTLLGALLKFYTHWTGSIKLSFMFCGTAMTTGKFLICYTPPAGRAPQSRQEAMLGTNLIWDIGLQSTATLVIPWIAASHYRLNGKTNSEGRVGLYSTSGRITIFYQTNIVVPPDCPTTAKIVLLVSACDDFVMRIPLD
type: DOMAIN
name: Rhv-like
description: Picornavirus/Calicivirus coat protein

phrase: PDTAVNRFYTFDSVLWSAQSNGWYYRLPGSMLDFGLFGQNMQYHYLMRTGYAIHVQCNASKFHQGALLVAVIPEMQTDNPEGSVDTGILTPLDGATNLKFDESLEPEQLTIFPHQWINLRTNNTATIIMPYANSVPMDNGLIHNNCTLVILPVAGLQYSTGATVVVPITVTIAPMCSEYNGL
type: DOMAIN
name: Rhv-like
description: Picornavirus/Calicivirus coat protein
Protein sequence:
CTTGPCCRQCKLKPAGTTCWRTSVSSHYCTGRSCECPSYPGNG

Annotated regions:
phrase: CTTGPCCRQCKLKPAGTT
type: DOMAIN
name: Disintegrin_dom
description: Disintegrin domain

phrase: HYCTGRSCECPS
type: DOMAIN
name: Disintegrin_dom
description: Disintegrin domain
Protein sequence:
MKFSSIEEGIKDLKEGKMIIVVDNEDRENEGDLVIPAEMATGENINFMIKYARGLVCAPIEEEIAIKLGLNPMVERNTDNHETAFTVAVDHKDTTTGISAFERAYTINKLVSSNEPMDFRRPGHIFPLIAKKKGVLERIGHTEASVDLAKLAGFKGAATICEIVNDDGNMARRDDLMIFAREHNLKILTISDLIQYRLENEVSVSKEIEAKLPTKYGDFKIIGFEERGTNKCHVALVKGDITTDEPVLTRIHSECLTGDALGSRKCDCGEQYAASMEMIAKEGRGMLLYMRQEGRGIGLLNKLKAYALQDKGLDTVDANLALGLEEDARDYKASGDMLRILGVNKVRLITNNPSKIEGLTNSNIEVVERVPIEMPLNENDELYLRTKKERMNHLLNI

Annotated regions:
phrase: EIEAKLPTKYGDFKIIGFEERGTNKCHVALVKGDITTDEPVLTRIHSECLTGDALGSRKCDCGEQYAASMEMIAKEGRGMLLYMRQEGRGIGLLNKLKAYALQDKGLDTVDANLALGLEEDARDYKASGDMLRILGVNKVRLITNNPSKIEGLTNSNIEVVERV
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MTEQYYKIALLFNANKVYDRQVVEGIGQYIQASQCMWDIFVEDEFIYHTDTINQLSIDGIIADFDDPKTVELLQHTLIPTIAVGGSYKQADFYPHFPYIATDNMALVEMALSHLQEKGLSQFAFYGLQVNTHKHWSIERRDAFVELMEKNHYPIYLYEGVQVHAQNWLEEQQKLIVWLKSLPSHTGIIAVTDARARHLLQACEYSKIAVPEELCVVGIDNEELIQYLSRMSLSSVEQGTREIGYQAAKLLHKLLNGQKVSHTPILIPPITVHSRNSTDYRSLTDPLVIQAMHYIRHRACHRIKVGQVLDHLETSRSNLEQRFKNEMNKTIHQVIHEEKISRAKNLLQQTDISIKEITEICGYPSIQYFYSVFKKEFEMTPKEFRLNC

Annotated regions:
phrase: RIKVGQVLDHLETSRSNLEQRFKNEMNKTIHQVIHEEKISRAKNLLQQTDISIKEITEICGYPSIQYFYSVFKKEFEMTPKEF
type: DOMAIN
name: HTH_AraC
description: DNA binding HTH domain, AraC-type

phrase: KISRAKNLLQQTDISIKEITEICGYPSIQYFYSVFKKEFEMT
type: CONSERVED_SITE
name: HTH_AraC-typ_CS
description: HTH domain AraC-type, conserved site

phrase: IKEITEICGYPSIQY
type: DOMAIN
name: Tscrpt_reg_AraC-type_HTH
description: Transcription regulator HTH, AraC- type, HTH domain

phrase: FYSVFKKEFEMTPKEF
type: DOMAIN
name: Tscrpt_reg_AraC-type_HTH
description: Transcription regulator HTH, AraC- type, HTH domain

phrase: DHLETSRSNLEQRFKNEMNKTIHQVIHEEKISRAKNLLQQTDISIKEITEICGYPSIQYFYSVFKKEFEMTPKEF
type: DOMAIN
name: HTH_AraC
description: DNA binding HTH domain, AraC-type

phrase: IQAMHYIRHRACHRIKVGQVLDHLETSRSNLEQRFKNEMNKTIHQVIHEEKISRAKNLLQQTDISIKEITEICGYPSIQYFYSVFKKEFEMTPKEFRL
type: DOMAIN
name: HTH_AraC
description: DNA binding HTH domain, AraC-type

phrase: SHLQEKGLSQFAFYGLQVNTHKHWSIERRDAFVELMEKNHYPIYLYEGVQVHAQNWLEEQQKLIVWLKSLPSHTGIIAVTDARARHLLQACEYSKIAVPEELCVVGIDNEELIQYLSRMSLSSVEQGTREIGYQAAKLLHKLLNGQKVSHTPILIPPITVHSRNS
type: DOMAIN
name: LacI/GalR-like_sensor
description: Transcriptional regulator LacI/GalR-like, sensor domain

phrase: KIALLFNANKVYDRQVVEGIGQYIQASQCMWDIFVEDEFIYHTDTINQLSIDGIIADFDDPKTVELLQHTLIPTIAVGGSYKQADFYPHFPYIATDN
type: DOMAIN
name: XylR_PBP1
description: Xylose operon regulatory protein, N-terminal domain
Protein sequence:
MSDSLVVCEVDPELTEKLRKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQNISPEELKMELPERQPRFVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRTTDDLTEAWLQEKLSFFR

Annotated regions:
phrase: SLVVCEVDPELTEKLRKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQNISPEELKMELPERQPRFVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRTTDDLTEAWLQEKL
type: DOMAIN
name: ADF-H
description: Actin-depolymerising factor homology domain

phrase: PELTEKLRKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQNISPEELKMELPERQPRFVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRTTDDLTEAWLQEKL
type: DOMAIN
name: ADF-H
description: Actin-depolymerising factor homology domain

phrase: TEKLRKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQNISPEELKMELPERQPRFVVYSYKYVHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELTKVFEIRTTDDLTEAWLQE
type: DOMAIN
name: ADF-H
description: Actin-depolymerising factor homology domain
Protein sequence:
MEILLASNNEKKARELEVILAEFDLSDVRVILLRDAPTYPEPLEDGRTFVDNALIKARAGVSNTGMITLADDSGLAVEELNGCPGVLSARWAGSHGDDAANNSLLLEQMAHVPDDRRQAAFVSVCALVFPNGEEYIAEGRWDGRLLRQPQGENGFGYDPIFVPNEEIENGGMRSSAQLSPNEKNAVSHRRKALLQLAPIIGQHL

Annotated regions:
Protein sequence:
MFAYIRGRLEYKNNDFLIVESNGVGYRIFTSLSTISGIGEIGQEVKVYTYLYVREDVISLYGFLTQEELNVFELLISVSGVGPKAAVSVLSAISPSRFSLAVITDDVKTLTKAQGIGKKIAQRIILELKDKIKKEQLTEYAQSEEGGKVLDTDSSKMAEAVSALMVLGYSPAEANKAVSAVYREDMDIETIIKNALKGLARP

Annotated regions:
phrase: KMAEAVSALMVLGYSPAEANKAVSAVYREDMDIETIIKNALKG
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal

phrase: SKMAEAVSALMVLGYSPAEANKAVSAVYREDMDIETIIKNAL
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal

phrase: MFAYIRGRLEYKNNDFLIVESNGVGYRIFTSLSTISGIGEIGQEVKVYTYLYVREDVISLY
type: DOMAIN
name: DNA_helicase_Holl-junc_RuvA_I
description: DNA helicase, Holliday junction RuvA type, domain I, bacterial

phrase: KTLTKAQGIGKKIAQRIIL
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: ELLISVSGVGPKAAVSVLS
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1
Protein sequence:
MAFIAALGIFMAGICPAVLCFPNGTLGRDTAVQEDQDNGTQVDSLTLASINTDFAFSLYKELALKNPDKNIVFSPLSISAALAIVSLGAKCNTLQEILEGLKFNLTETPEADIHLGFRHLLHMLSQSGKEEQINIAVSMFIEKHLQILAEFQEKVRSLYQAEAFTADFQQADEARKFINDYVRKETQGKIQELLSDLVERTSMVLVNYIYFKGKWKMPFDPRVTLKSEFYLDEKRSVKVPMMKIEDLTTPYFRDEELSCSVVELKYIGNASALFILPDQGRIEQVEASLQPETLRKWKDSLRPRKIDLLYLPKFLVSTDYSLEDVLSELGIKEVFSAQADLSRVTGTKDLSVSQVVHKAMLEVAEKGTEAAAATGVKFVFRSGRVPTMTVRFDRPFLMVVSHTGVESILFLAKVTNPN

Annotated regions:
phrase: VRFDRPFLMV
type: CONSERVED_SITE
name: Serpin_CS
description: Serpin, conserved site

phrase: FSLYKELALKNPDKNIVFSPLSISAALAIVSLGAKCNTLQEILEGLKFNLTETPEADIHLGFRHLLHMLSQSGKEEQINIAVSMFIEKHLQILAEFQEKVRSLYQAEAFTADFQQADEARKFINDYVRKETQGKIQELLSDLVERTSMVLVNYIYFKGKWKMPFDPRVTLKSEFYLDEKRSVKVPMMKIEDLTTPYFRDEELSCSVVELKYIGNASALFILPDQGRIEQVEASLQPETLRKWKDSLRPRKIDLLYLPKFLVSTDYSLEDVLSELGIKEVFSAQADLSRVTGTKDLSVSQVVHKAMLEVAEKGTEAAAATGVKFVFRSGRVPTMTVRFDRPFLMVVSHTGVESILFLAKVTN
type: DOMAIN
name: Serpin_dom
description: Serpin domain

phrase: NTDFAFSLYKELALKNPDKNIVFSPLSISAALAIVSLGAKCNTLQEILEGLKFNLTETPEADIHLGFRHLLHMLSQSGKEEQINIAVSMFIEKHLQILAEFQEKVRSLYQAEAFTADFQQADEARKFINDYVRKETQGKIQELLSDLVERTSMVLVNYIYFKGKWKMPFDPRVTLKSEFYLDEKRSVKVPMMKIEDLTTPYFRDEELSCSVVELKYIGNASALFILPDQGRIEQVEASLQPETLRKWKDSLRPRKIDLLYLPKFLVSTDYSLEDVLSELGIKEVFSAQADLSRVTGTKDLSVSQVVHKAMLEVAEKGTEAAAATGVKFVFRSGRVPTMTVRFDRPFLMVVSHTGVESILFLAKVTN
type: DOMAIN
name: Serpin_dom
description: Serpin domain
Protein sequence:
MNKDNTLHVDTIMKITMFSEVSVGILANSILFFAHLCMLLGENKPKPIHLYIASLSLTQLMLLITMGLIAADMFISQGIWDSTSCQSLIYLHRLSRGFTLSAACLLNVFWMITLSSKKSRLTKFKHNSPHHISGAFLLLCVLYMCFSSHLILSIIATPNLTSDNFMYVTKSCSFLPMCYSRTSMFSTTIAVREAFFIGLMALSSGYLVAFLWRHRKQAQHLHSTGLSSKASPEQRATETILLLMSFFVVLYILENVVFYSRMKFKDGSTFYCVQIIVSHSYATVSSFVFIFTEKRMTKILRSVCTRIINI

Annotated regions:
Protein sequence:
MGGKWSKGWPAVRERIRRTDPAADGVGAASRDLEKHGALTSSNTASTNADCAWLQAQEEEEEEVGFPVRPQVPLRPITYKAAFDLSFFLKEKGGLEGLIYSKRRQEILDLWVYHTQGYFPDWQNYTKGPGVRYPLTFGWCFKLVPVDPSEVEEDXKGENNCLLHPIXQHGMEDEXREVLMWKFDSSLARRHMARELHPEYYKDC

Annotated regions:
Protein sequence:
MRADSIDLYTGNANPELAAKVARYLGRELGKAEVFAFANENIFVKILDNAREKDVFIVQPTSRPVSTSIMELLIMIDAFKRASAGRITAVIPYYGYGRSDKKDQPRVPITARLVADMIQVAGANRILTLDLHQGQLQGFFNIPVDELTAVHLLSNYIKQRGTENLAVVTDLGFAKRARTFAEILDAPLAIVEKRREGNNDHAEVLNVIGDVKGKRVIIVDDEIDTAGTLTETIRALEREGVVEITACSTHGVFSGPAIERIEASSLREVVVTDSIPLPPGKTSTKIKRLSSAPLFGEAIRRIHLGESVGALFGKEAAIAEEMVFWDGEHAGLTPNGTAVRSGEVRGRAAQAKLKR

Annotated regions:
phrase: AVHLLSNYIKQRGTENLAVVTDLGFAKRARTFAEILDAPLAIVEKRREGNNDHAEVLNVIGDVKGKRVIIVDDEIDTAGTLTETIRALEREGVVEITACSTHGVFSGPAIERIEASSLREVVVTD
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: LYTGNANPELAAKVARYLGRELGKAEVFAFANENIFVKILDNAREKDVFIVQPTSRPVSTSIMELLIMIDAFKRASAGRITAVIPYYGYGRSDKKDQPRVPITARLVADMIQVA
type: DOMAIN
name: Pribosyltran_N
description: Ribose-phosphate pyrophosphokinase, N-terminal domain
Protein sequence:
MRAKPSDAKLTGLFLDMLAAEQGAGPNTLDAYRRDLTDFSEFLGRVGHSFADAETQTLRDYLADLDTRGFKSTSVARRLSAMRHLYRFLLNERIRGDDPAAILSGPKRGRGLPKVLSIADVDRMLRRARELSEAEDASPSKRLRALRLYCLLEVLYATGLRVSELVALPRTAAKRDARMIVVRGKGNKERLVPLNEASRQAMADYLAATEAAKSDKKTGVAASKWLFPSFGESGHLTRQHFARDLKELAVASGLQARLVSPHVLRHAFASHLLHNGADLRIVQTLLGHTDISTTQIYTHVVEERLKSLVRDLHPLAEK

Annotated regions:
phrase: LRALRLYCLLEVLYATGLRVSELVALPRTAAKRDARMIVVRGKGNKERLVPLNEASRQAMADYLAATEAAKSDKKTGVAASKWLFPSFGESGHLTRQHFARDLKELAVASGLQARLVSPHVLRHAFASHLLHNGADLRIVQTLLGHTDISTTQIYTHVV
type: DOMAIN
name: Integrase_catalytic
description: Integrase, catalytic domain

phrase: FLDMLAAEQGAGPNTLDAYRRDLTDFSEFLGRVGHSFADAETQTLRDYLADLDTRGFKSTSVARRLSAMRHLYRFLLN
type: DOMAIN
name: Integrase_SAM-like_N
description: Integrase, SAM-like, N-terminal

phrase: PSDAKLTGLFLDMLAAEQGAGPNTLDAYRRDLTDFSEFLGRVGHSFADAETQTLRDYLADLDTRGFKSTSVARRLSAMRHLYRFL
type: DOMAIN
name: CB
description: Core-binding (CB) domain

phrase: GLPKVLSIADVDRMLRRARELSEAEDASPSKRLRALRLYCLLEVLYATGLRVSELVALPRTAAKRDARMIVVRGKGNKERLVPLNEASRQAMADYLAATEAAKSDKKTGVAASKWLFPSFGESGHLTRQHFARDLKELAVASGLQARLVSPHVLRHAFASHLLHNGADLRIVQTLLGHTDISTTQIYTHVVEERLKSLV
type: DOMAIN
name: Integrase_catalytic
description: Integrase, catalytic domain
Protein sequence:
MSFIVIIPARYESSRLLGKPLMDIQGKPMVEWTWMQAKKSGATRVVIATESDRVKAVCESFGAEVCLTSERHESGTERIAEVASLLGLNDDDILVNVQGDEPLLPPDLIHQVAEGLETHPNTLMATLCEPILDVETVFDPHAVKVIRDCNNYALNFTRAPMPWSRDTFGSEPKTLPGNWPYRRHIGLYAYRSGFVKRYVEWPVCALEQVEKLEQLRVLWHGEKILVLDALCEAGVGVDTEQDLIKVRKIMANLNPDGAL

Annotated regions:
Protein sequence:
MTSFLRSDRSRPVAIWLFIVAAMVFAMVVVGGATRLTDSGLSITEWQPIMGALPPMSEQAWRESFELYKQIPQFQLVNPDMTLEGYKEIFWWEWAHRLLGRTVGAVYAIPLIVFLIRRDIPRRLIWRCAAMLGLGGLQGLVGWWMVSSGLSERVSVAPERLMTHLGLALALFVLLIWTALDAWNGSPRVEERSPWRGWALAFLGAVFFQSLLGALVAGNDAGFVYNDWPLMNGRFFPGDYGGAGLWGTLAHSQAAVQFNHRIFAYALLLAAVVLVVLARRDRLLVGQGKSLATAVAAVVFLQAALGVWTLMAAVPISLGVLHQAGAAVLLAVATAFAWRVRRP

Annotated regions:
Protein sequence:
MSEIPKRVLIGVGGGIAAYKVCHVVSALAKEQIEVRVILTDSAQAFVTPLTFATLSRNPAYTDQMFWDASSPRPLHIELGEWADLFLIAPLTANTLAKLTYGLADNLLTNTVLASTCPILLAPAMNTDMWEQRSTQRNWRELLSDTRYHSAAPGEGILACDRVGTGRMAEPEELLLQIRSLLQTHDRDLTGKQILVSAGGTREHFDPVRFIGNPSTGKMGIAIAQAALHRGAEVTLVHAPIDSHLLAPLRSIQCIPVTTSQDMQQAMKQNFSSADYIVMSAAVGDVKPNFYSDAKLPKSQLPETLDLVPIPDILAELSTLKRPNQHLIGFAAQTGDFVTPALEKLHRKNLDVIVANPIDQPNSGFGSETNQAVFIDRTGRQVAIPPCTKLELAHQLFDFIHQRISCQSGQSELSSQP

Annotated regions:
phrase: KRVLIGVGGGIAAYKVCHVVSALAKEQIEVRVILTDSAQAFVTPLTFATLSRNPAYTDQMFWDASSPRPLHIELGEWADLFLIAPLTANTLAKLTYGLADNLLTNTVLASTCPILLAPAMNTDMWEQRSTQRNWRELLSDTRYHSAAPGEGILACDRVGTGRMAEPEELLLQIR
type: DOMAIN
name: Flavoprotein
description: Flavoprotein

phrase: LTGKQILVSAGGTREHFDPVRFIGNPSTGKMGIAIAQAALHRGAEVTLVHAPIDSHLLAPLRSIQCIPVTTSQDMQQAMKQNFSSADYIVMSAAVGDVKPNFYSDAKLPKSQLPETLDLVPIPDILAELSTLKRPNQHLIGFAAQTGDFVTPALEKLHRKNLDVIVANPIDQPNSGFGSETNQAVF
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal
Protein sequence:
MAGHSKWANIKHKKAAQDAKRGKIFTRLIKEITVAARLGGGDPNSNPRLRLAVDKAYEQNMPKENVERAIKRGSGDLEGVNYEEIRYEGYGIAGAAVLVDCMTDNRVRTVADVRHAFTKYGGNLGTDGSVGFLFKHCGQLLFAPGTDEDKLMEVALEAGAEDIIAHDDGSIEVITAPYEFVAVKEALEKAGFKAELAEVTMKPVNETELTGDDSVKMQKLLDALESIDDVQEVYTTAVID

Annotated regions:
phrase: YEEIRYEGYGIAGAAVLVDCMTDNRVRTVADVRHAFTKYGGNLGTDGSVGFLFKHCGQLLFAPGTDEDKLMEVALEAGAEDIIAHDDGSIEVITAPYEFVAVKEALEKAGFKAELAEVTMKPVNETELTGDDSVKMQKLLDALESIDDVQEVYT
type: DOMAIN
name: TACO1_YebC-like_2nd/3rd_dom
description: TACO1/YebC-like, second and third domains

phrase: SKWANIKHKKAAQDAKRGKIFTRLIKEITVAARLGGGDPNSNPRLRLAVDKAYEQNMPKENVERAIKRGS
type: DOMAIN
name: TACO1_YebC_N
description: TACO1/YebC-like, N-terminal domain
Protein sequence:
MKIPVPYAWTPDFKTTYENIDSEHRTLFNGLFALSEFNTQHQLNAAIEVFTLHFHDEQGQMIRSNYVNTKEHTDIHNGFMDTMRGWQSPVPQKALKDGMEWLANHIPTEDFKYKGKL

Annotated regions:
phrase: ENIDSEHRTLFNGLFALSEFNTQHQLNAAIEVFTLHFHDEQGQMIRSNYVNTKEHTDIHNGFMDTMRGWQSPVPQKALKDGMEWLANHIPTEDFKYK
type: DOMAIN
name: Hemerythrin_metal-bd
description: Hemerythrin, metal-binding domain

phrase: TYENIDSEHRTLFNGLFALSEFNTQHQLNAAIEVFTLHFHDEQGQMIRSNYVNTKEHTDIHNGFMDTMRGWQSPVPQKALKDGMEWLANHIPTEDFKYKG
type: DOMAIN
name: Hemerythrin-like
description: Hemerythrin-like

phrase: AWTPDFKTTYENIDSEHRTLFNGLFALSEFNTQHQLNAAIEVFTLHFHDEQGQMIRSNYVNTKEHTDIHNGFMDTMRGWQSPVPQKALKDGMEWLANHIPTEDFKY
type: DOMAIN
name: Hemerythrin_metal-bd
description: Hemerythrin, metal-binding domain

phrase: HFHDEQGQMIRSNYVNTKEHTDI
type: BINDING_SITE
name: Haemerythrin_Fe_BS
description: Haemerythrin, iron-binding site
Protein sequence:
MRVKETQRNWPNLWKWGTLILGLVIICNASDNLWVTVYYGVPVWKDADTTLFCASDAKAHETEVHNVWATHACVPTDPNPQEIYLENVTENFNMWKNNMVEQMHEDVISLWDQSLKPCVKLTPLCVTLSCASVNLTKVNTMTNVPNIGNITDEVKNCSFNMTTEVRDKKQKVHALFYKLDIVQIGNNNNSSEYRLINCNTSVIKQACPKVSFDPIPIHYCTPAGYAILKCNDKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEEEIIISSEKITDNAKTIIVHLNKSVEINCTRPSNNTRTSITIGPGQVFYRTGDIIGDIRKAYCEINGTKWSEVLKQVAGKLKEHFNKTITFEPHSGGDLEITMHHFNCRGEFFYCDTTKLFNTTCINETMGGCNDTIILPCKIKQIIKMWQGVGQAMYAPPISGSINCVSNITGMLLIRDGGNNTKDNETFRPEGGNIKDNWRSELYKYKVVQIEPLGIAPTRAKRRVVEREKRAVGIGAMIFGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHMLRLTVWGIKQLQARVLAVERYLKDQKFLGLWGCSGKIICTTAVPWNSTWSNKTYEEIWGNMTWIEWEREISNYTNQIYEVLTKSQDQQDKNEKDLLELDKWASLWNWFDITNWLWYIKIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQTLIHPQREPDRPGRIEEEGGEQGRDRSVRLVNGFLALIWDDLRSLCLFCYHRLRDCIL

Annotated regions:
phrase: NTMTNVPNIGNITDEVKNCSFNMTTEVRDKKQKVHALFYKLDIVQIGNNNNSSEYRLINCNTSVIKQACPKVSFDPIPIHYCTPAGYAILKCNDKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEEEIIISSEKITDNAKTIIVHLNKSVEINCTRPSNNTRTSITIGPGQVFYRTGDIIGDIRKAYCEINGTKWSEVLKQVAGKLKEHFNKTITFEPHSGGDLEITMHHFNCRGEFFYCDTTKLFNTTCINETMGGCNDTIILPCKIKQIIKMWQGVGQAMYAPPISGSINCVSNITGMLLIRDGGNNTKDNETFRPEGGNIKDNWRSELYKYKVVQIEPLGIAPTRAKRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: LWVTVYYGVPVWKDADTTLFCASDAKAHETEVHNVWATHACVPTDPNPQEIYLENVTENFNMWKNNMVEQMHEDVISLWDQSLKPCVKLTPLCVTLSCASVNLTKVNTMTN
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: MGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHMLRLTVWGIKQLQARVLAVERYLKDQKFLGLWGCSGKIICTTAVPWNSTWSNKTYEEIWGNMTWIEWEREISNYTNQIYEVLTKSQDQQDKNEKDLLELDKWASLWNWFDITNWLWYIKIFIMIVGGLIGLRIIFAVLSIVNRVRQGYSPLSFQT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: VQARQLLSGIVQQQSNLLRAIEAQQHMLRLTVWGIKQLQARVLAVERYLKDQKFLGLWGCSGKIICTTAVPWNSTWSNKTYEEIWGNMTWIEWEREISNYTNQIYEVLTKSQDQQDKNEKDLLELD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MATSLTSQLENLRTSAARHLTVEKRHVSLLFDRKEANKLSNETAHRIGVAGLEQMKRIDPVFDTEFANDLFSEERVDFVRSMLEKGANEELNKQIEKLLLELSPYLQHFACQQVLEFLIHTYQIYSFNAETLLLTFLPFHETKVYSRLLRILDFDWKRSKEWQFMQQFTKTETPIPFTSIARATLSSKHSIITCITDHIRHAVEIVGSDYLEIKHPILFNFHAKLLLSMFTDPEKVDEMMLAKLMPFIENGIKSPMKSFRYSAMVVISQLVLTVKLKDEVLNSMCKLLITKMRSDTAAASLSTLMVVFQQQNVQSLSKNTLKKLLRHEEGIDVWKILKELSERTDTTKFFNVLWKELIVLSKDAESEDNTLAIDVLIETIEDASILTGDQAGTILKLILQEGMDGNIFDNKKKLKSNIRAIGMRFAKQFDAIHAELKAKDKKTLKNVLKEYQIEDIVQFASEAVAATQSEESIEIISEEAPSSKKIKLTASEKAQKLAQSSEFAKREVFSGDPINKATEWLNGEKWDKVEWALNEMAQRGEKYFSRKVEDDVEQFVLEIVKVVGVGGVKQIDGGSVKAALAGANLNPQFVADLLTKFDGVSEIAPKRTKGAQKKNLVEKTFGTEESWEAFNQRVVFVLDLLNARQIIPSSEKVLAALFAVVKQVNSKSDVESSSYQQHLAVNAIRKILEHPEKTKIGASEVDMDCVIETMRSTHNHHLLRDCLRLIVAAAKHTPNSVVKHVMSVFTFMGNGMLRKDNELTLSIVEKTV

Annotated regions:
phrase: MLAKLMPFIENGIKSPMKSFRYSAMVVISQLVLTVKLKDEVLNSMCKLLITKMRSDTAAASLSTLMVVFQQQNVQSLSKNTLKKLLRHEEGIDVWKILKELSERTDTTKFFNVLWKE
type: DOMAIN
name: U3snoRNP10_N
description: U3 small nucleolar RNA-associated protein 10, N-terminal