nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTSQDSVDWQDVLPVDERQRIRDLISDATSADGVAPVGDQVLRELGQQRTRHLVALQDGALRGYLNLAPAGDGAPPMAELVVHPDARRRGIGSAMIRTALSVGGPDTRIWAHGDLEPARATAAALGLSAVRELLQMRRSLADLPTAPPVDGVRFATYAGPQDDAEVLRVNNAAFSWHPEQGGWTEADIAERRDEQWFDPDGFFLAFDEDSGRLLGFHWTKVHSATLGEVYVVGVDTAAQGRGLGGALTLIGLHHLADRLLSSGHDADVMLYVEADNTAAVKTYRRLGFEVVNTDVAYAVEG

Annotated regions:
phrase: LRELGQQRTRHLVALQDGALRGYLNLAPAGDGAPPMAELVVHPDARRRGIGSAMIRTALSVGGPDTRIW
type: DOMAIN
name: GNAT_dom
description: GNAT domain

phrase: PEQGGWTEADIAERRDEQWFDPDGFFLAFDEDSGRLLGFHWTKVHSATLGEVYVVGVDTAAQGRGLGGALTLIGLHHLADRLLSSGHDADVMLYVEADNTAAVKTYRRLG
type: DOMAIN
name: GNAT_dom
description: GNAT domain

phrase: VDWQDVLPVDERQRIRDLISDATSADGVAPVGDQVLRELGQQRTRHLVALQDGALRGYLNLAPAGDGAPPMAELVVHPDARRRGIGSAMIRTALSVGGPDTRIWAHGDLEPARATAAALGLSAVRELLQMRRSLADLPTAPPV
type: DOMAIN
name: GNAT_dom
description: GNAT domain

phrase: VRFATYAGPQDDAEVLRVNNAAFSWHPEQGGWTEADIAERRDEQWFDPDGFFLAFDEDSGRLLGFHWTKVHSATLGEVYVVGVDTAAQGRGLGGALTLIGLHHLADRLLSSGHDADVMLYVEADNTAAVKTYRRLGFEVVNTDVAYAVE
type: DOMAIN
name: GNAT_dom
description: GNAT domain
Protein sequence:
MPIVKAKPTSAGRRFVVQVTSLELYKGRPHPALTKKLSKSGGRNNQGRITVRHCGGGHKRLYRIIDFRRDKIDVLGRVKRIEYDPNRSAHIALINYSDGEKRYIIAPKAVKVGDIITSGREAPIRDGNCLPLRNIPVGTLVHCIELKPGKGAQIARSAGSSCQLVAREGDHAMLRLRSGEIRKVPLECRATIGEVGNDGHGLRSLGKAGAMRWRGKRPTVRGVAMNPVDHPHGGGEGRTSGGRHPVSPWGVPTKGYKTRRNKRTGKFIVRRRKK

Annotated regions:
phrase: PTVRGVAMNPV
type: CONSERVED_SITE
name: Ribosomal_uL2_CS
description: Large ribosomal subunit protein uL2, conserved site

phrase: GRNNQGRITVRHCGGGHKRLYRIIDFRRDKIDVLGRVKRIEYDPNRSAHIALINYSDGEKRYIIAPKAVKVGDII
type: DOMAIN
name: Ribosomal_uL2_RNA-bd_dom
description: Large ribosomal subunit protein uL2, RNA-binding domain

phrase: IRDGNCLPLRNIPVGTLVHCIELKPGKGAQIARSAGSSCQLVAREGDHAMLRLRSGEIRKVPLECRATIGEVGNDGHGLRSLGKAGAMRWRGKRPTVRGVAMNPVDHPHGGGEGRTSGGRHPVSPWGV
type: DOMAIN
name: Ribosomal_uL2_C
description: Large ribosomal subunit protein uL2, C-terminal

phrase: DGNCLPLRNIPVGTLVHCIELKPGKGAQIARSAGSSCQLVAREGDHAMLRLRSGEIRKVPLECRATIGEVGNDGHGLRSLGKAGAMRWRGKRPTVRGVAMNPVDHPHGGGEGRTSGGRHPVSPW
type: DOMAIN
name: Ribosomal_uL2_C
description: Large ribosomal subunit protein uL2, C-terminal
Protein sequence:
MPTNWKDSGLRWYWVVVLVFIADQVSKQWVLTNFELHESVNLLPFFNFTYVRNYGAAFSFLSDAGGWQKWLFTFIAVAFSTILTIWLRKQPTKVWRLNLAYTLVIGGALGNLIDRLQHGYVVDFLDFFWNTSHFAAFNIADSAICIGAGLIILDSFIGDDKEKSQNGQNDNNAAKE

Annotated regions:
Protein sequence:
MPRSLKKGPFVDDHLLAKVDVQNEKGTKQVIKTWSRRSTIIPDFIGHTFAVHDGRKHVPVFVSDSMVGHKLGEFAPTRTFKGHIKDDRKAKRR

Annotated regions:
phrase: DGRKHVPVFVSDSMVGHKLGEFAP
type: CONSERVED_SITE
name: Ribosomal_uS19_CS
description: Small ribosomal subunit protein uS19, conserved site
Protein sequence:
MNETEKIILLKLGGSLLTEKNKPFSLRKDVIKNAVNQIGRSNKKLIIIHGGGSFGHPLAKKYSISKGINNSIENQIMGLSETHDAMNKLNSYVISEFLDQLIPAISIQTSSIFLKKSHEYLIKTVDIIETYLKLGLIPILYGDIVVEKSGNFSILSGDQIILELCNNLNKFKVEKVIFTTETDGIYINENDSTDNTKLATEIHYKDLDNINLANLGQKIDVTGGMKGKIDSIKKICDLNIPVQIINGLKPNYILKALKSEKIKGTYIGIDNNDRITRISRRKIEHLKIPIDYNVQNKSNYFDDIELIYHAFPQINFDDVNLSTNFFGKIISAPICIAAITGGHPVAYEINKILADAAENQNIIMSVGSQRAGLVDPELSKSFSIVREIAPDIPIIGNLGIGQLSRSNFNLDDFIDCINMIKADVMAVHFNALHELFQEKGDKTYNNLLENFKEVKNAIKIPIIAKEVGSGFNQEVAQTLENIGFDGFDVGGAGGTSFAAIESHRNNNLNSMYTRNPAELFRDWGIPTPVSISYVRKVSQKPIISTGGLRNGIDIAKSIALGANIGGFAYKFLLTAWKDYKNNSKSNSIKEIITLKNELQSCLWLMNASNSKEIFKKKDKLIILGNLYNWFNQNKTL

Annotated regions:
phrase: KIILLKLGGSLLTEKNKPFSLRKDVIKNAVNQIGRSNKKLIIIHGGGSFGHPLAKKYSISKGINNSIENQIMGLSETHDAMNKLNSYVISEFLDQLIPAISIQTSSIFLKKSHEYLIKTVDIIETYLKLGLIPILYGDIVVEKSGNFSILSGDQIILELCNNLNKFKVEKVIFTTETDGIYINENDSTDNTKLATEIHYKDLDNINLANLGQKIDVTGGMKGKIDSIKKICDLNIPVQII
type: DOMAIN
name: Asp/Glu/Uridylate_kinase
description: Aspartate/glutamate/uridylate kinase
Protein sequence:
MSGPADETAGDLPVKDIGPNLSGIGGLQESSSIQKVKPRQAVTRVSREELEDRFLRLHDENILLKQHAHKQEDKIKRMATKLIRLVNDKKRSERVGGGSKRPGRDVELEEMIEQLQEKVHELERQNEGLRNRLISTKQQLQVQGHRHTPYNHVQSRINTGLRKLNESVGLRDGTGKGMRTQNVERTRSPQAGLPKYGHSLLEEAKAEIRNLENVIESQKGQIEELEHSEEILKSQMKRSEKEFEKVLLQLREQQATGQRSNIRDNVEMIKLHKQLVEKSNALSVMEGKFIQLQESQRNLKASHDALMANEDELNLQLKEQRLKCCSLEKQLQLMTFSERRKEELQDRINDLEKERELLKENYDKLYSSAFGVTHEQQWKLKEQQLKLQIAQLESALKSDLADKTEILSRLKVERDQNEVLTQENRKLQLQYLEHKQQLDELENRMKFFSKESDIDVSEFSEALMLVKARKEQKSRDLSFLEKVDDDVRKDMEQTLRELQATHAETIQELEKTRNMLIMQHKINKDYQMEVETVTQKMEDFQQDYELQLEQYVHLLDIRAARIQKLEAQLKDIAYGTKQYRFKPDIMPGDPVDEFDETVHLERGENLFEIHISRVIFSPEAVHPLGDREPATFCTYAFYDFELQTTPVVRGLHPDYNFTSQYHVHVNDFFLQYIQKNTVTLEVHQAYSTDYETVAAGQMRFHEILEKNGRIFGRAILVGIREDIQNYGTVEYWIRLRVPMDQAIRLYKERAKALGYITTNLKEPDQMHQ

Annotated regions:
phrase: VHLERGENLFEIHISRVIFSPEAVHPLGDREPATFCTYAFYDFELQTTPVVRGLHPDYNFTSQYHVHVNDFFLQYIQKNTVTLEVHQAYSTDYETVAAGQMRFHEILEKNGRIFGRAILVGIREDIQNYGTVEYWIRLRV
type: DOMAIN
name: C2-C2_1
description: RPGR-interacting protein 1, first C2 domain
Protein sequence:
MDSHQELSAGSPISYDFLDPDWCFKRYLTKDALHSIETGKGAAYFVPDGFTPILIPNSQSYLLDGNSAQLPRPQPISFTLDQCKVPGYILKSLRKDTTSTERTPRPPNAFILYRKEKHATLLKSNPSINNSQVSKLVGEMWRNESKEVRMRYFKMSEFYKAQHQKMYPGYKYQPRKNKVKR

Annotated regions:
phrase: TPRPPNAFILYRKEKHATLLKSNPSINNSQVSKLVGEMWRNESKEVRMRYFKMSEFYKAQHQKMYPGY
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain

phrase: RTPRPPNAFILYRKEKHATLLKSNPSINNSQVSKLVGEMWRNESKEVRMRYFKMSEFYKAQHQKMYPGYK
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain

phrase: TPRPPNAFILYRKEKHATLLKSNPSINNSQVSKLVGEMWRNESKEVRMRYFKMSEFYKAQHQKMYPGY
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain
Protein sequence:
MQLHELKPAPGSRQKPTRKGQGIGSGLGKTAGRGHKGQKARSGGGVRPGFEGGQQPLQRRLPKRGFTNARFKKEFAIINVGDLDVFEAGTVVTPELLLERKMIKKLKDGVKLLADGNIEKALTVKLHGVSEAAAEKIKAAGGQVEVM

Annotated regions:
phrase: KLLADGNIEKALTVKLHGVSEAAAEKIKAA
type: CONSERVED_SITE
name: Ribosomal_uL15_CS
description: Large ribosomal subunit protein uL15, conserved site

phrase: IINVGDLDVFEAGTVVTPELLLERKMIKKLKDGVKLLADGNIEKALTVKLHGVSEAAAEKIKAAGGQV
type: DOMAIN
name: Ribosomal_uL15/eL18
description: Large ribosomal subunit protein uL15/eL18
Protein sequence:
MESLKRWNEERGLWCEKGVQVLLTTIGAFSAFGLMTIAISTDYWLYTRALICNTTNLTAGDDGPPHRGGSGSSEKKDPGGLTHSGLWRICCLEGLKRGVCVKINHFPEDTDYDHDSAEYLLRVVRASSIFPILSAILLLLGGVCVAASRVYKSKRNIILGAGILFVAAGLSNIIGVIVYISANAGEPGPKRDEEKKNHYSYGWSFYFGGLSFILAEVIGVLAVNIYIERSREAHCQSRSDLLKAGGGAGGSGGSGPSAILRLPSYRFRYRRRSRSSSRGSSEASPSRDASPGGPGGPGFASTDISMYTLSRDPSKGSVAAGLASAGGGGSGAGVGAYGGAAGAAGGGGAGSERDRGSSAGFLTLHNAFPKEAASGVTVTVTGPPAAPAPAPAPPAPAAPAPGTLSKEAAASNTNTLNRKTTPV

Annotated regions:
Protein sequence:
MSKRALISVTDKTGVVEFAKELNKLDYEIISTGNTFKTLKENGVNVMQVEDVTNFPEILDGRVKTLNPYIHGGILYKRDKESHVETVNEHKIHSIDLVAVNLYDFEGTLKAGKSHDEIIENIDIGGPSMIRSAAKNYKDVIVVVDIKDYDSIIEKLKTDTMTLEDRKKLSYKAFSTTGRYDALISSYFAGEVGDTYPDILNLTFQKEQTLRYGENPHQNGFLYSQSNAKNPILNYEQLGGKELSFNNLNDLHGCLEVMREFKDSEEVVSVAIKHANSCGVGLGKDAFEAYTKCYEADKVSIFGGIVGITSTIDKATAEKLNEIFLEIVVAYDFEPEALEILKQKKNLRILKLAKIENSLQPYEMKYLDGKLLIQDRNNILAEKSENVTKEKPTDAQLKDMEFGMRVVKNMKSNAIAIVKNGQTLALGCGQTSRIWALKNALENNKDKDFTGAVLASDAFFPFDDCVTLAHEYGISAVVQPGGSIKDKDSIEACDKYDMVMVFTGIRHFKH

Annotated regions:
phrase: GVVEFAKELNKLDYEIISTGNTFKTLKENGVNVMQVEDVTNFPEILDGRVKTLNPYIHGGILYKRDKESHVETVNEHKIHSIDLVAVNLYDFEGTLKAGKSHDEIIENIDIGGP
type: DOMAIN
name: MGS-like_dom
description: Methylglyoxal synthase-like domain

phrase: MSKRALISVTDKTGVVEFAKELNKLDYEIISTGNTFKTLKENGVNVMQVEDVTNFPEILDGRVKTLNPYIHGGILYKRDKESHVETVNEHKIHSIDLVAVNLYDFEGTLKAGKSHDEIIENIDIGGPSMIRSAAKNYKDVIVV
type: DOMAIN
name: MGS-like_dom
description: Methylglyoxal synthase-like domain

phrase: GVVEFAKELNKLDYEIISTGNTFKTLKENGVNVMQVEDVTNFPEILDGRVKTLNPYIHGGILYKRDKESHVETVNEHKIHSIDLVAVNLYDFEGTLKAGKSHDEIIENIDIGG
type: DOMAIN
name: MGS-like_dom
description: Methylglyoxal synthase-like domain
Protein sequence:
MQETFKFLRCNSQGEAVEDKYSLKTLKNHFVVRDEYNNLFRVFSSRDDFWEWEADQPFEQKCFHEVVFGFFPQRLKFDIDFPVNKSYSEEDNDDNVYNILDIIINVIMDVFYETYSLPYNINLTREQILLTDSIGLNKKRELKYSFHIILYTYSVLNNNEAKAFTSKVLENLPKHVYPFVDPQVNKSIQNFRIIGSHKKGSMRVKMFNEELADVFETSMTTKKSDTLITTPFETTCLPCILTHVKEMTNSCDSIQQNELEEVLKFAGVLCKNHCFLRVHKNLVLFKRTSPSYCEICKRMHDKDNTLILRVAGNKVYQHCRHDNKHSLLMGSLSGTTNFVEIYVDQVMTKSIEVHESILFEELPDTQKHIYDESSMREYERVPTLVVKAQMKIGKTIQLRNYLQKYYGNDSISKQQTIRFVTFRQIFSKNIQTRLPNFTLYSEVTGDLDSYERVIIQVESLFRLTSTAEPVDLLILDEVESIFNQFNSGLHKYFAPSFAIFMWMLETANHVICLDANLGNRTYNILQRFRGDVPIFFHWNQYQKAQNDMYYFTSSREIWLNNLLKDLLEDKKIVIPTNSLMEARLLQTFIQKKFPEKKIGFYSSKSTAHERESHFNNVSYYWGLIDILIYTPTISAGVSYEDKRFDVLYGFFNNMSCDVETCCQMLGRVRELKSKTYKICLQGKQNYFPETIEDIETFTLQKRDTLFQTINNHQLSFTYSKETGRPIYYKTPYYHLWLETMRIQHLSKNHFITRFINQVADTGAKVFILTGEKLETVKQYTSIKMEIKHQDYVNIASAETIDANKALLIKQNLKEGITVDQQDLFAYEKYKLLEFYAWHGNKITPKFVEQYNSFMTKQNYTGRVQISRGKTVHESLTMLQTQELNFHQWAMQHAEHHDLQFNYSFQSHMYAIMLLTKCGFKCVQDPNILTNEQLMTKLVDEFVQYDLSAVSFEFKLKKPNKMDPQTILKFINKVLGIRYGLKIHHNKGNYYIKNTKAGSLIPFVRQQIKQSPCVVSNLLPITETFSTKEESSPTREETSSIKEKTFTET

Annotated regions:
phrase: SREIWLNNLLKDLLEDKKIVIPTNSLMEARLLQTFIQKKFPEKKIGFYSSKSTAHERESHFNNVSYYWGLIDILIYTPTISAGVSYEDKRFDVLYGFFNNMSCDVETCCQMLGRVRELKSK
type: DOMAIN
name: Replication_origin-bd
description: Replication origin-binding protein

phrase: RVPTLVVKAQMKIGKTIQLRNYLQKYYGNDSISKQQTIRFVTFRQIFSKNIQTRLPNFTLYSEVTGDLDSYERVIIQVESLFRLTSTAEPVDLLILDEVESIFNQFNSGLHKYFAPSFAIFMWMLETANHVICLDANLGNRTYNILQRFRGDVPIFFHWNQ
type: DOMAIN
name: Replication_origin-bd
description: Replication origin-binding protein
Protein sequence:
MDNHGILESLLFTAGDEGLDEKQLLEILDMSKDQLVELIENYSSHGLMIQRFGMTYVLTTKKEAATYIEQLIEQKSQMKLSQAAMEVLSIIAYNQPLSRSDIELIRSINSDGAVKTLIAKGLVEAKVVNEQRSQQLITTDLFLNVFGISNIEDLPTTEEDDEEMDAFFSNLVNQKGENND

Annotated regions:
Protein sequence:
MRKLTLTLSALALALSLNSVADAKVYMPEKVSDGVTVAQLAEQHAIHWISVEQIEESLKGQPMAVGFDIDDTVLFSSPGFYRGKLEYSPNDYSYLKNPEFWEKMNNEWDKFSMPKKSGMELVQMHLKRGDTVYFITGRSKTKTETVTKYVQEGLRIPADKMNPVIFAGDEEGQNNKVSWMRDHKLKIYYGDADADIAAARELNIRGIRVLRASNSSYQPLPKAGQFGEEVVINSEY

Annotated regions:
Protein sequence:
MTTTPLSPSTPSNAQVPDIQGRFGRFGGKYVPETLMPALAELETAYQKYRHDPGFQAELQQLLRDYVGRATPLYFAERLTAHYARPDGTGAQIYLKREDLNHTGAHKINNALGQVLLAKRMGKQRIIAETGAGQHGVATATVCARFGLECVIYMGVHDMERQALNVFRMRLMGAEVRPVEAGTGTLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGQETRAQALEKWGGLPDILLACVGGGSNAMGLFYEFVNESSIRLIGVEAAGEGVNTEKHAATLTKGRVGVLHGAMSYLLQDEDGQVIEAHSISAGLDYPGVGPEHSYLKDVGRAEYYSVTDEQALAAFQRLSRLEGIIPALETAHAIAYLETLCPQLDGSPRIIINCSGRGDKDVQTVAKFLIPQ

Annotated regions:
phrase: RATPLYFAERLTAHYARPDGTGAQIYLKREDLNHTGAHKINNALGQVLLAKRMGKQRIIAETGAGQHGVATATVCARFGLECVIYMGVHDMERQALNVFRMRLMGAEVRPVEAGTGTLKDATSEAIRDWVTNVETTHYILGSVAGPHPYPMMVRDFHAVIGQETRAQALEKWGGLPDILLACVGGGSNAMGLFYEFVNESSIRLIGVEAAGEGVNTEKHAATLTKGRVGVLHGAMSYLLQDEDGQVIEAHSISAGLDYPGVGPEHSYLKDVGRAEYYSVTDEQALAAFQRLSRLEGIIPALETAHAIAYLETLCPQLDGSPRIIINCS
type: DOMAIN
name: TrpB-like_PALP
description: Tryptophan synthase beta chain-like, PALP domain

phrase: LNHTGAHKINNALG
type: CONSERVED_SITE
name: Trp_synth_b_CS
description: Tryptophan synthase, beta chain, conserved site
Protein sequence:
MPSRGTICSLLLLSVLWVDLTMAGSSFLSPEHHKVQHRKESKKPPAKLKPRALEDWLPSEDGGQAQGAEEELEIRFNAPFDVGIKLSGAQYHQHSQALGTFLQDILWEEANEAPDDR

Annotated regions:
phrase: GSSFLSPEHHKVQHRKESKKPPAKLKP
type: DOMAIN
name: Motilin_ghrelin
description: Motilin/ghrelin

phrase: EDGGQAQGAEEELEIRFNAPFDVGIKLSGAQYHQHSQALGTFLQDILWEEANEA
type: DOMAIN
name: Motilin_assoc
description: Motilin/ghrelin-associated peptide
Protein sequence:
MNVQERRNLNAAVERHTSDHVSWYLSSIGRIPLLTAEEEVELSRKVQLMMALLENPDAESNSENQAVLQAGQRAKTKMLKANLRLVVSVAKKYQNQGLELLDLIQEGSLGLERAVEKFDPALGYKFSTYAYWWIRQSMTRAIDNHARTIRLPIHVSEKISRIKKMTRELTHQLKRLPSRAEIAEALKLPLQDVEMLLSQSTPCTSLDAQARGDDGRSFLGDLIPDPKSLEPMDAMDRHIQHEQISTWLAHLTEREQQVLQLRFGLHDGEQHTLAEIGRRLNVSRERIRQVEARALQKLRVLSQQPLCPEAC

Annotated regions:
phrase: DLIQEGSLGLERA
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: FSTYAYWW
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: LTEREQQVLQLR
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: TLAEIGRRLNVSRER
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: IRQVEARALQK
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: LKANLRLVVSVAKKYQNQGLELLDLIQEGSLGLERAVEKFDPALGYKFSTYAYWWIRQSMTRAIDNHA
type: DOMAIN
name: RNA_pol_sigma70_r2
description: RNA polymerase sigma-70 region 2

phrase: KTKMLKANLRLVVSVAKKYQNQGLELLDLIQEGSLGLERAVEKFDPALGYKFSTYAYWWIRQSMTRAIDNHARTIRLPIHVSEKISRIKKMTRELTHQLKRLPSRAEIAEALKLPLQDVEMLLSQSTPCTSLDAQARGDDGRSFLGDLIPDPKSLEPMDAMDRHIQHEQISTWLAHLTEREQQVLQLRFGLHDGEQHTLAEIGRRLNVSRERIRQVEARALQKLR
type: DOMAIN
name: RNA_pol_sigma-70_dom
description: RNA polymerase sigma-70-like domain

phrase: DHVSWYLSSIGRIPLLTAEEEVELSRKVQ
type: DOMAIN
name: RNA_pol_sigma70_r1_2
description: RNA polymerase sigma-70 region 1.2

phrase: TLAEIGRRLNVSRERIRQVEARALQK
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70

phrase: WLAHLTEREQQVLQLRFGLHDGEQHTLAEIGRRLNVSRERIRQVEARALQKL
type: DOMAIN
name: RNA_pol_sigma70_r4
description: RNA polymerase sigma-70 region 4

phrase: EKISRIKKMTRELTHQLKRLPSRAEIAEALKLPLQDVEMLLSQSTPCTSLDAQARGDDGRSFLGDLIPDPKSLEPMD
type: DOMAIN
name: RNA_pol_sigma70_r3
description: RNA polymerase sigma-70 region 3

phrase: DLIQEGSLGLERA
type: DOMAIN
name: RNA_pol_sigma70
description: RNA polymerase sigma-70
Protein sequence:
MVIRHDWSREEVRSLLDLPFPELLFRAAAIHRACFDPREVQISTLLSIKTGGCPEDCAYCPQAAQYDTGVEASRLMRVDAVLEEARAAKAAGASRFCMGAAWRSPKERDMDTVCEMIEGVKALGMESCVTLGMLTDQQALRLKQAGLDYYNHNLDTSPEYYGAVISTRTYEDRLETLAHVRDAGINVCCGGILGLGEGLDDRAGLIVALANLPRHPESVPINALVQVEGTPLKGQEPVDTIDFVRMIAVARITMPHARVRLSAGREAMTDEAQALCFLAGANSIFYGEKLLTTGNPAAERDRALLSRLGMRLV

Annotated regions:
phrase: IKTGGCPEDCAYCPQAAQYDTGVEASRLMRVDAVLEEARAAKAAGASRFCMGAAWRSPKERDMDTVCEMIEGVKALGMESCVTLGMLTDQQALRLKQAGLDYYNHNLDTSPEYYGAVISTRTYEDRLETLAHVRDAGINVCCGGILGLGEGLDD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: PINALVQVEGTPLKGQEPVDTIDFVRMIAVARITMPHARVRLSAGREAMTDEAQALCFLAGANSIFYGEKLLTTGNPAAERDRALLSRLG
type: DOMAIN
name: BATS_dom
description: Biotin and thiamin synthesis-associated domain

phrase: PINALVQVEGTPLKGQEPVDTIDFVRMIAVARITMPHARVRLSAGREAMTDEAQALCFLAGANSIFYGEKLLTTGNPAAERDRALLSRLGMR
type: DOMAIN
name: BATS_dom
description: Biotin and thiamin synthesis-associated domain

phrase: STLLSIKTGGCPEDCAYCPQAAQYDTGVEASRLMRVDAVLEEARAAKAAGASRFCMGAAWRSPKERDMDTVCEMIEGVKALGMESCVTLGMLTDQQALRLKQAGLDYYNHNLDTSPEYYGAVISTRTYEDRLETLAHVRDAGINVCCGGILGLGEGLDDRAGLIVALANLPRHPESVPINALVQVEGTPLKGQEPVDTIDFVRMIAVARITM
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: REVQISTLLSIKTGGCPEDCAYCPQAAQYDTGVEASRLMRVDAVLEEARAAKAAGASRFCMGAAWRSPKERDMDTVCEMIEGVKALGMESCVTLGMLTDQQALRLKQAGLDYYNHNLDTSPEYYGAVISTRTYEDRLETLAHVRDAGINVCCGGILGLGEGLDDRAGLIVALANLPRHPESVPINALVQVEGTPLKGQEPVDTIDFVRMIAVARITMPHARVRL
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MNILVTNDDGVTADGILCLARYLSKKHEVTVVAPETEQSAVGHAITLRFPLWLRKIDINEEFEIYAVSGTPADCVKMGIDVVLKEKPDLLISGINRGNNLGTDVVYSGTVSGALEGAIAGVPSIAISSFSFENPLYETAAKFILEFLEEFDVKSIPRFTALNINVPSVPYGELKGWKLTRQSKRMYEDYFEQRKDPSGGNYYWMMGNIIENDPDPKADYKAVAEKYVSVTPISVFLTNEEYLKRLEERYEDKAIR

Annotated regions:
phrase: MNILVTNDDGVTADGILCLARYLSKKHEVTVVAPETEQSAVGHAITLRFPLWLRKIDINEEFEIYAVSGTPADCVKMGIDVVLKEKPDLLISGINRGNNLGTDVVYSGTVSGALEGAIAGVPSIAISSFSFENPLYETAAKFILEFLEEFDVKSIPRFTALNINVPSVPYGELKGWKLTRQSKRMYEDYFEQRKDPSGGNYYWMMGNIIENDPDPKADYKAVAEKYVSVTPIS
type: DOMAIN
name: SurE-like_Pase/nucleotidase
description: Survival protein SurE-like phosphatase/nucleotidase

phrase: ILVTNDDGVTADGILCLARYLSKKHEVTVVAPETEQSAVGHAITLRFPLWLRKIDINEEFEIYAVSGTPADCVKMGIDVVLKEKPDLLISGINRGNNLGTDVVYSGTVSGALEGAIAGVPSIAISSFSFENPLYETAAKFILEFLEEFDVKSIPRFTALNINVPSVPYGELKGWKLTRQSKRMY
type: DOMAIN
name: SurE-like_Pase/nucleotidase
description: Survival protein SurE-like phosphatase/nucleotidase
Protein sequence:
MGQASSHSENDLFISHLKESLKVRRIRVRKKDLVSFFSFIFKTCPWFPQEGSIDSRVWGRVGDCLNDYYRVFGPETIPITTFNYYNLIRDVLTNQSDSPDIQRLCKEGHKILISHSRPPSRQAPVTITTSEKASSRPPSRAPSTCPSVAIDIGSHDTGQSSLYPNLATLTDPPIQSPHSRAHTPPQHLPLLANSKTLHNSGSQDDQLNPADQADLEEAAAQYNNPDWPQLTNTPALPPFRPPSYVSTAVPPVAVAAPVLHAPTSGVPGSPTAPNLPGVALAKPSGPIDETVSLLDGVKTLVTKLSDLALLPPAGVMAFPVTRSQGQVSSNTTGRASPHPDTHTIPEEEEADSGESDSEDDEEESSEPTEPTYTHSYKRLNLKTIEKIKTAVANYGPTAPFTVALVESLSERWLTPSDWFFLSRAALSGGDNILWKSEYEDISKQFAERTRVRPPPKDGPLKIPGASPYQNNDKQAQFPPGLLTQIQSAGLKAWKRLPQKGAATTSLAKIRQGPDESYSDFVSRLQETADRLFGSGESESSFVKHLAYENANPACQSAIRPFRQKELSTMSPLLWYCSAHAVGLAIGAALQNLAPAQLLEPRPAFAIIVTNPAIFQETAPKKIQPPTQLPTQPNAPQASLIKNLGPTTKCPRCKKGFHWASECRSRLDINGQPIIKQGNLNRGQPQGPTTGMNSGASQFTPQYRQPTPALPVINHAATSQTSGEQQRAVQDWTSVPPPTQY

Annotated regions:
phrase: AATTSLAKIRQGPDESYSDFVSRLQETADRLFGSGESESSFVKHLAYENANPACQSAIRPFRQKELSTM
type: DOMAIN
name: Gag_p24_C
description: Retroviral nucleocapsid Gag protein p24, C-terminal domain

phrase: PTTKCPRCKKGFHWASECRSRLDINGQPIIKQGNLNRGQPQGPTTGMNSGA
type: DOMAIN
name: Primate_lentivir_Gag_pol-like
description: Primate lentivirus group Gag polyprotein-like

phrase: NDLFISHLKESLKVRRIRVRKKDLVSFFSFIFKTCPWFPQEGSIDSRVWGRVGDCLNDYYRVFGPETIPITTFNYYNLIRDVL
type: DOMAIN
name: B_retro_matrix
description: Beta-retroviral matrix protein
Protein sequence:
MATALYTANDFILISLPQNAQPVTAPGSKTDSWFNETLIGGRAFVSDFKIPEFKIGSLDTLIVESEELSKVDNQIGASIGKIIEILQGLNETSTNAYRTLPINNMPVPEYLENFQWQTRKFKLDKSIKDLITLISNESSQLDADVRATYANYNSAKTNLAAAERKKTGDLSVRSLHDIVKPEDFVLNSEHLTTVLVAVPKSLKSDFEKSYETLSKNVVPASASVIAEDAEYVLFNVHLFKKNVQEFTTAAREKKFIPREFNYSEELIDQLKKEHDSAASLEQSLRVQLVRLAKTAYVDVFINWFHIKALRVYVESVLRYGLPPHFNIKIIAVPPKNLSKCKSELIDAFGFLGGNAFMKDKKGKINKQDTSLHQYASLVDTEYEPFVMYIINL

Annotated regions:
Protein sequence:
MERWQNIHKVVVVGLGITGLSVVKHLTKTQPQLTVKVIDTRATPPGTERLPEQVELHSGGWNTEWLAEADLVVTNPGIALATPEIQEVLAKGAPVVGDIELFAWAVDKPVIAITGSNGKSTVTDLTGVMAKAAGLTVGVGGNIGVPALDLLEQDADLYVLELSSFQLESTLSLKLKAAAFLNLSEDHMDRYEGMSDYRQAKLRIFDNAELAVVNRDDQETFPDTETPLVTFGSDEQAYGLEADGNRTWLLDHGQRVIASDELKLVGKHNLANALVVLALLKAADVDYHKSLNALKTYTGLTHRCQVVADNRGVKWVNDSKATNIASTIAALSGLESTGKLYLLVGGVGKGADFTPLKPIFATLNLQLCCFGADGDEFMPLHESATRFDTMEDVIQQISSQLKTGDMVMLSPACASFDQFDNFMARGDAFAALAEKYA

Annotated regions:
phrase: HRCQVVADNRGVKWVNDSKATNIASTIAALSGLESTGKLYLLVGGVGKGADFTPLKPIFATLNLQLCCFGADGDEFMPLHESATRFDTMEDVIQQISSQLKTGDMVMLSPA
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: ITGSNGKSTVTDLTGVMAKAAGLTVGVGGNIGVPALDLLEQDADLYVLELSSFQLESTLSLKLKAAAFLNLSEDHMDRYEGMSDYRQAKLRIFDNAELAVVNRDDQETFPDTETPLVTFGSDEQAYGLEADGNRTWLLDHGQRVIASDELKLVGKHNLANALVVLA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central
Protein sequence:
MRVLVNKHVFMQPQPGHYAHTRMSMLLLKPKTKDLLSHRLDDVFRSASREADALAAARYREPERGAPTGFNLAFNTDKNFWEYITNDDPQRGERFARAMHAVNINSLDVIPRLYPFDSLVVDGGLIVDVGGGQGQVAKRILEYFPSSGLRCIVQDRYVVNASSPGPAVVEMQQHDFFEAQPVKGAAAYFFRHIFHDWPDKACAAILKQTARAMDKDRSRILICDQVLQDDVPAEASLLYDIDMMSLFGGKERSLAEWKYLIASAEESLHIVNVIFSTESEAAILDVRIK

Annotated regions:
phrase: FNLAFNTDKNFWEYITNDDPQRGERFARAMHAVNINSLDVIPRLYPFDSLVVDGGLIVDVGGGQGQVAKRILEYFPSSGLRCIVQDRYVVNASSPGPAVVEMQQHDFFEAQPVKGAAAYFFRHIFHDWPDKACAAILKQTARAMDKDRSRILICDQVLQDDVPAEASLLYDIDMMSLFGGKERSLAEWKYLIAS
type: DOMAIN
name: O_MeTrfase_dom
description: O-methyltransferase domain
Protein sequence:
MSVASTAAPFHTTSGSSGAISTFSVVDYVVFGLLLVLSLVIGLYHACRGWGHHTVGELLMADRKMGCLPVALSLLATFQSAVAILGAPAEIFRFGTQYWFLGCSYFLGLLIPAHIFIPVFYRLHLTSAYEYLELRFNKAVRICGTVTFIFQMVIYMGVALYAPSLALNAVTGFDLWLSVLALGIVCNIYTALGGLKAVIWTDVFQTLVMFLGQLVVIIVGAARVGGLGHVWNVTSQHGLISGINLDPDPFVRHTFWTLAFGGVFMMLSLYGVNQAQVQRYLSSHSERAAVLSCYAVFPCQQVALCMSCLIGLVMFAYYNMYSMSPELKQAAPDQLVLYFVMDLLKDMPGLPGLFVACLFSGSLSTISSAFNSLATVTMEDLIQPWFPQLTETRAIMLSRGLAFAYGLVCLGMAYISSHLGSVLQAALSIFGMVGGPLLGLFCLGLFFPCANPLGAIVGLLTGLTMAFWIGIGSIVSRMSSAVAPPPLNGSSSFLPANVTVAAVTTVMPSTLSKPTGLQHFYSLSYLWYSAHNSTTVIVVGLIVSLLTGGMRGRSLNPGTIYPVLPKLLALLPLSCQKRLCWRSHSQDIPVIPNLFPEKMRNGVLQDSTDKERMAEDGLVHQPCSPTYVVQETSL

Annotated regions:
phrase: GFDLWLSVLALGIVCNIYTALGGLK
type: CONSERVED_SITE
name: Na/solute_symporter_CS
description: Sodium/solute symporter, conserved site
Protein sequence:
MTNIRKSHPLAKIINESFIDLPAPSNISAWWNFGSLLGICLIIQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFTETWNIGILLMFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIISALAAVHLLFLHETGSNNPSGVMSNSDKIPFHPYYTTKDILGLLILILMLMLLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFITIGQLASILYFSIFLILMPISGIIENRLLKW

Annotated regions:
phrase: IDLPAPSNISAWWNFGSLLGICLIIQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFTETWNIGILLMFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIISALAAVHLLFLHET
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: PLAKIINESFIDLPAPSNISAWWNFGSLLGICLIIQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFTETWNIGILLMFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIISALAAVHLLFLHETGS
type: DOMAIN
name: Cytochrome_b_N_euk/bac
description: Cytochrome b/b6, N-terminal domain, eukaryotic/bacterial

phrase: NPSGVMSNSDKIPFHPYYTTKDILGLLILILMLMLLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFITIGQL
type: DOMAIN
name: Cytochrome_b_C_euk/bac
description: Cytochrome b/b6, C-terminal domain, eukaryotic/bacterial

phrase: GVMSNSDKIPFHPYYTTKDILGLLILILMLMLLVLFSPDLLGDPDNYIPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFITIGQLASILYFSIFLILMPISGIIENRLLK
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALVLSILILAIIPLLHTSKQRSMMFRPLSQCLFWLLVADLLTLTWIGGQPVEHPFITIGQLASILY
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: MTNIRKSHPLAKIINESFIDLPAPSNISAWWNFGSLLGICLIIQILTGLFLAMHYTSDTMTAFSSVTHICRDVNYGWIIRYMHANGASMFFICLFMHVGRGLYYGSYTFTETWNIGILLMFTVMATAFMGYVLPWGQMSFWGATVITNLLSAIPYIGTSLVEWIWGGFSVDKATLTRFFAFHFILPFIISALAAVHLLFLHETGSNNP
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain
Protein sequence:
MAAPALGLVCGRCPELGLVLLLLLLSLLCGAAGSQEAGTGAGAGSLAGSCGCGTPQRPGAHGSSAAAHRYSREANAPGPVPGERQLAHSKMVPIPAGVFTMGTDDPQIKQDGEAPARRVTIDAFYMDAYEVSNTEFEKFVNSTGYLTEAEKFGDSFVFEGMLSEQVKTNIQQAVAAAPWWLPVKGANWRHPEGPDSTILHRPDHPVLHVSWNDAVAYCTWAGKRLPTEAEWEYSCRGGLHNRLFPWGNKLQPKGQHYANIWQGEFPVTNTGEDGFQGTAPVDAFPPNGYGLYNIVGNAWEWTSDWWTVHHSVEETLNPKGPPSGKDRVKKGGSYMCHRSYCYRYRCAARSQNTPDSSASNLGFRCAADRLPTMD

Annotated regions:
phrase: KMVPIPAGVFTMGTDDPQIKQDGEAPARRVTIDAFYMDAYEVSNTEFEKFVNSTGYLTEAEKFGDSFVFEGMLSEQVKTNIQQAVAAAPWWLPVKGANWRHPEGPDSTILHRPDHPVLHVSWNDAVAYCTWAGKRLPTEAEWEYSCRGGLHNRLFPWGNKLQPKGQHYANIWQGEFPVTNTGEDGFQGTAPVDAFPPNGYGLYNIVGNAWEWTSDWWTVHHSVEETLNPKGPPSGKDRVKKGGSYMCHRSYCYRYRCAARSQNTPDSSASNLGFRC
type: DOMAIN
name: SUMF_dom
description: Sulfatase-modifying factor enzyme-like domain
Protein sequence:
MKNNISKFPLSFSKSAIKKIKTIISEKNIPNLKFRVYIAGGGCSGFQYKFKFDKNKNKNDTIVNIFNNIIIIDPISLQYLRGGQIDYIENLEGSKFIILNPKAKHTCGCGSSFSI

Annotated regions:
phrase: FIILNPKAKHTCGCGSS
type: CONSERVED_SITE
name: FeS_cluster_insertion_CS
description: FeS cluster insertion, C-terminal, conserved site

phrase: LSFSKSAIKKIKTIISEKNIPNLKFRVYIAGGGCSGFQYKFKFDKNKNKNDTIVNIFNNIIIIDPISLQYLRGGQIDYIENLEGSKFIILNPKAKHTCGC
type: DOMAIN
name: FeS_biogenesis
description: FeS cluster biogenesis
Protein sequence:
MPIIIDKDLPARKVLQEENIFVMTKERAETQDIRALKIAILNLMPTKQETEAQLLRLIGNTPLQLDVHLLHMESHLSRNVAQEHLTSFYKTFRDIENEKFDGLIITGAPVETLSFEEVDYWEELKRIMEYSKTNVTSTLHICWGAQAGLYHHYGVPKYPLKEKIFGVFEHEVREQHVKLLQGFDELFFAPHSRHTEVRESDIREVKELTLLANSEEAGVHLVIGQEGRQVFALGHSEYSCDTLKQEYERDRQKGLNIDVPKNYFKHNNPNEKPLVRWRSHGNLLFSNWLNYYVYQETPYVL

Annotated regions:
Protein sequence:
MVHEYDNTLKVCLVRSLIGVPSRHRLSVRALGLRKVSDMRKVNDTPQVRGLIKKVHYLVRIQD

Annotated regions:
phrase: LKVCLVRSLIGVPSRHRLSVRALGLRKVSDMRKVNDTPQVRGLIKKVHYL
type: DOMAIN
name: Ribosomal_uL30_ferredoxin-like
description: Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain
Protein sequence:
MTQRTKTRPVKVGNLTIGGNNELIIQSMTTTKTHDVEATVAEIKRLEEAGCQVVRVAVPDERAANAIADIKKQINIPLVADIHFDYRLALKAIEGGIDKVRINPGNIGRRHKVEAVVNAAKERGIPIRIGVNAGSLERHILEKYGYPTADGMVESALHHIKILEDLDFHDIIVSMKASDVNLAIEAYEKAARAFDYPLHLGITESGTLFAGTVKSAAGLGAILSKGIGNTLRISLSADPVEEVKVARELLKSFGLASNAATLISCPTCGRIEIDLISIANEVEEYISTLKVPIKVAVLGCAVNGPGEAREADIGIAGARGEGLLFRKGQVVRKVPEETMVEELKKEIDVIAAEMAAEREKEKQEQ

Annotated regions: