nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MVNWTKEQEEAIYTSGSDILVAAAAGSGKTAVLVERIIQKLLAEHNPTNIDALLVVTFTNAAAQEMRNRVGAALEQALAANPSSIHLKKQLSLLQRASISTLHSFCLDIVKKNAYILDIDPSFRIADDMEMDLLKQEVLDDLLEEWYGDSNPNQDSFFEVVNRFTSDRSDAEMEELIRSLHTFAMQSPWPNQWLDKLVQTYNIPEEWTEEELPWMNVLRDEVSRQLDAVSQEIDIAYSITQEADGPYHYAKTIEEEKAIIQEALKNMESWKYLQQSMLQVKFGKLSGKKVDCDEEKKTKVKKLRDSYKKRFQKMQEVWFARNLDAHVYDMRVLAPVIKHLVELVKQFQDSFAKVKKEKAVVDFSDLEHYCLQILIDESSTEEEVIPSTVAMQLQRQFTEVLVDEYQDTNMVQETILQLISDRQGSGNMFMVGDVKQSIYRFRHAEPSLFIDKYKRFSNSDDPSIRIDLARNFRSRENVLLGANYIFRQLFDEDLGEISYDDAAELIYGNKMYDDHPLEAKPELLLIDNNSEDVEQSDNEETVEDLEKAQIEARAYAKQIKNWIGTPEDEIPMQVVDKATGKQRDLQYKDIVILMRSMTWASTIADELQQQGIPTYADLSTGYFEAIEIKVMLSFLKVIDNPRQDIPLASILRSPIIGLEEDQLASIRLADRKASFYEAVQRYLQNEQDNSDTVKSLIRFMEMLNDFRQSARQGSLSELIWDIYRETGYYDFVGAIPGGKQRQANLRALYDRARGYESTSFRGLYRFLR

Annotated regions:
phrase: AAELIYGNKMYDDHPLEAKPELLLIDNNSEDVEQSDNEETVEDLEKAQIEARAYAKQIKNWIGTPEDEIPMQVVDKATGKQRDLQYKDIVILMRSMTWASTIADELQQQGIPTYADLSTGYFEAIEIKVMLSFLKVIDNPRQDIPLASILRSPIIGLEEDQLASIRLADRKASFYEAVQRYLQNEQDNSDTVKSLIRFMEMLNDFRQSARQGSLSELIWDIYRETGYYDFVGAIPGGKQRQANLRALYDRARGYESTSFRGLYRFL
type: DOMAIN
name: DNA_helicase_UvrD-like_C
description: UvrD-like DNA helicase, C-terminal

phrase: WTKEQEEAIYTSGSDILVAAAAGSGKTAVLVERIIQKLLAEHNPTNIDALLVVTFTNAAAQEMRNRVGAALEQALAANPSSIHLKKQLSLLQRASISTLHSFCLDIVKKNAYILDIDPSFRIADDMEMDLLKQEVLDDLLEEWYGDSNPNQDSFFEVVNRFTSDRSDAEMEELIRSLHTFAMQSPWPNQWLDKLVQTYNIPEEWTEEELPWMNVLRDEVSRQLDAVSQEIDIAYSITQEADGPYHYAKTIEEEKAIIQEALKNMESWKYLQQSMLQVKFGKLSGKKVDCDEEKKTKVKKLRDSYKKRFQKMQEVWFARNLDAHVYDMRVLAPVIKHLVELVKQFQDSFAKVKKEKAVVDFSDLEHYCLQILIDESSTEEEVIPSTVAMQLQRQFTEVLVDEYQDTNMVQETILQLISDRQGSGNMFMVGDVKQSIYRFRHAEPSLFIDKYKR
type: DOMAIN
name: UvrD-like_ATP-bd
description: UvrD-like helicase, ATP-binding domain

phrase: VNWTKEQEEAIYTSGSDILVAAAAGSGKTAVLVERIIQKLLAEHNPTNIDALLVVTFTNAAAQEMRNRVGAALEQALAANPSSIHLKKQLSLLQRASISTLHSFCLDIVKKNAYILDIDPSFRIADDMEMDLLKQEVLDDLLEEWYGDSNPNQDSFFEVVNRFTSDRSDAEMEELIRSLHTFAMQSPWPNQWLDKLVQTYNIPEEWTEEELPWMNVLRDEVSRQLDAVSQEIDIAYSITQEADGPYHYAKTIEEEKAIIQEALKNMESWKYLQQSMLQVKFGKLSGKKVDCDEEKKTKVKKLRDSYKKRFQKMQEVWFARNLDAHVYDMRVLAPVIKHLVELVKQFQDSFAKVKKEKAVVDFSDLEHYCLQILIDESSTEEEVIPSTVAMQLQRQFTEVLVDEYQDTNMVQETILQLISDRQGSGNMFMVGDVKQSIYRFRHAEPSLFIDKYKRFSNSDDPSIRIDLARNFRS
type: DOMAIN
name: UvrD-like_ATP-bd
description: UvrD-like helicase, ATP-binding domain

phrase: IDLARNFRSRENVLLGANYIFRQLFDEDLGEISYDDAAELIYGNKMYDDHPLEAKPELLLIDNNSEDVEQSDNEETVEDLEKAQIEARAYAKQIKNWIGTPEDEIPMQVVDKATGKQRDLQYKDIVILMRSMTWASTIADELQQQGIPTYADLSTGYFEAIEIKVMLSFLKVIDNPRQDIPLASILRSPIIGLEEDQLASIRLADRKASFYEAVQRYLQNEQDNSDTV
type: DOMAIN
name: DNA_helicase_UvrD-like_C
description: UvrD-like DNA helicase, C-terminal
Protein sequence:
MPAPSAEVFDRLRNLAAIKDVAARPTRTIDEVFTGKPLTTIPVGTAADVEAAFAEARAAQTDWAKRPVIERAAVIRRYRDLVIENREFLMDLLQAEAGKARWAAQEEIVDLIANANYYARVCVDLLKPRKAQPLLPGIGKTTVCYQPKGVVGVISPWNYPMTLTVSDSVPALVAGNAVVLKPDSQTPYCALACAELLYRAGLPRALYAIVPGPGSVVGTAITDNCDYLMFTGSSATGSRLAEHAGRRLIGFSAELGGKNPMIVARGANLDKVAKAATRACFSNAGQLCISIERIYVEKDIAEEFTRKFGDAVRNMKLGTAYDFSVDMGSLISEAQLKTVSGHVDDATAKGAKVIAGGKARPDIGPLFYEPTVLTNVAPEMECAANETFGPVVSIYPVADVDEAVEKANDTDYGLNASVWAGSTAEGQRIAARLRSGTVNVDEGYAFAWGSLSAPMGGMGLSGVGRRHGPEGLLKYTESQTIATARVFNLDPPFGIPATVWQKSLLPIVRTVMKLPGRR

Annotated regions:
phrase: AELGGKN
type: CONSERVED_SITE
name: Ald_DH_CS_GLU
description: Aldehyde dehydrogenase, glutamic acid active site

phrase: IDEVFTGKPLTTIPVGTAADVEAAFAEARAAQTDWAKRPVIERAAVIRRYRDLVIENREFLMDLLQAEAGKARWAAQEEIVDLIANANYYARVCVDLLKPRKAQPLLPGIGKTTVCYQPKGVVGVISPWNYPMTLTVSDSVPALVAGNAVVLKPDSQTPYCALACAELLYRAGLPRALYAIVPGPGSVVGTAITDNCDYLMFTGSSATGSRLAEHAGRRLIGFSAELGGKNPMIVARGANLDKVAKAATRACFSNAGQLCISIERIYVEKDIAEEFTRKFGDAVRNMKLGTAYDFSVDMGSLISEAQLKTVSGHVDDATAKGAKVIAGGKARPDIGPLFYEPTVLTNVAPEMECAANETFGPVVSIYPVADVDEAVEKANDTDYGLNASVWAGSTAEGQRIAARLRSGTVNVDEGYAFAWGSLSAPMGGMGLSGVGRRHGPEGLLKYTESQT
type: DOMAIN
name: Aldehyde_DH_dom
description: Aldehyde dehydrogenase domain
Protein sequence:
MKTSRQPAPGWATTLHLGRACGRKQLLASVGNESAWSRLALIEPACLSFFTKRVFMAAGRKKMTFCPLREETGLSTQHPPRAHLHPKTAGSALWTWPMSLDREFYFLKKEVSLFWICVCEQPASIWTTLRRCSASRLLHSYERVEYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKADGANALGGKGAGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFMGKMHKTCYNQEGITDVPAEDDPSPCALETGHGRQCQNGTVCRPGWDGPKHGITNFDNFAFAMLTVFQCITMEGWTDVLYWMQDAMGYELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENEDEGMDEEKPRNMSMPTSETESVNTENVAGGDIEGENCGARLAHRISKSKFSRYWRRWNRFCRRKCRAAVKSNVFYWLVIFLVFLNTLTIASEHYNQPHWLTEVQDTANKALLALFTAEMLLKMYSLGLQAYFVSLFNRFDCFIVCGGILETILVETKVMSPLGISVLRCVRLLRIFKITRYWNSLSNLVASLLNSVRSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDEMQTRRSTFDNFPQSLLTVFQILTGEDWNSVMYDGIMAYGGPSFPGMLVCIYFIILFICGNYILLNVFLAIAVDNLADAESLTSAQKEEEEEKERKKLARTASPEK

Annotated regions:
phrase: NVFYWLVIFLVFLNTLTIASEHYNQPHWLTEVQDTANKALLALFTAEMLLKMYSLGLQAYFVSLFNRFDCFIVCGGILETILVETKVMSPLGISVLRCVRLLRIFKITRYWNSLSNLVASLLNSVRSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDEMQTRRSTFDNFPQSLLTVFQILTGEDWNSVMYDGIMAYGGPSFPGMLVCIYFIILFICGNYILLNVFLAIAVDNLADAE
type: DOMAIN
name: Ion_trans_dom
description: Ion transport domain

phrase: HSYERVEYLFLIIFTVEAFLKVIAYGLLFHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKADGANALGGKGAGFDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELFMGKMHKTCYNQEGITDVPAEDDPSPCALETGHGRQCQNGTVCRPGWDGPKHGITNFDNFAFAMLTVFQCITMEGWTDVLYWMQDAMGYELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREK
type: DOMAIN
name: Ion_trans_dom
description: Ion transport domain
Protein sequence:
MRTFDGDTLVLASHNKGKLREIAELLAPFGIKVISAGDLGFEEPDETEDTFAGNARIKAHFASKESGLPALSDDSGIMVDALGGAPGVYTADWAETPNGRDFPMAMKKVWDKLEAIDASEPRTARFCCTLCLAWPDGHDEIFEGKVEGRLVWPMRGDLGFGFDPIFLPEGETETFGEMDPAKKQDMSHRADAFRKLVSGPFKDLSK

Annotated regions:
Protein sequence:
MSALVLDGKALAAKTEQELSQRVTALKARNGQTPILATILVGDDPASATYVKMKGNACTRIGMESIKVELPSSTTTEELLAKIQELNDNPNVHGILLQHPVPHQIDERLCFDAIAPEKDVDGVTCLGFGRMAMGEEAYGCATPKGIMRLLEAYNIEIAGKHAVVVGRSPILGKPMAMMLLNANATVTICHSRTRNLPDLIKQADIIVGAVGKPEFIKAEWIKDGAVVVDAGYHPGGVGDIELGPLVERAAAYTPVPGGVGPMTINTLIYQSVDSGEKKIR

Annotated regions:
phrase: FGRMAMGEEAYGCATPKGIMRLLEAYNIEIAGKHAVVVGRSPILGKPMAMMLLNANATVTICHSRTRNLPDLIKQADIIVGAVGKPEFIKAEWIKDGAVVVDAGYHPGGVGDIELGPLVERAAAYTPVPGGVGPMTINTLIYQSVDSGE
type: DOMAIN
name: THF_DH/CycHdrlase_NAD-bd_dom
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain

phrase: LDGKALAAKTEQELSQRVTALKARNGQTPILATILVGDDPASATYVKMKGNACTRIGMESIKVELPSSTTTEELLAKIQELNDNPNVHGILLQHPVPHQIDERLCFDAIAPEKDV
type: DOMAIN
name: THF_DH/CycHdrlase_cat_dom
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain

phrase: PGGVGPMT
type: CONSERVED_SITE
name: THF_DH/CycHdrlase_CS
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site

phrase: PEKDVDGVTCLGFGRMAMGEEAYGCATPKGIMRLLEAYNIEIAGKHAVVVGRSPILGKPMAMMLLNANATVTICHSRTRNLPDLIKQADIIVGAVGKPEFIKAEWIKDGAVVVDAGYHPGGVGDIELGPLVERAAAYTPVPGGVGPMTINTLIYQSVDSG
type: DOMAIN
name: THF_DH/CycHdrlase_NAD-bd_dom
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
Protein sequence:
MPDKDYASLYFGADLAKVDPDIHRIIELEEERQKRRIILIPSESIAPKPVRTALGSVFNNIYAEGYPPTRMSKDDEDVLLDFDWELANYRRYADRRFYKGADYVNFIECLAQRRAAHLFATDAVPADQIHVNVQALSGAAANLAVLETLMQPGDVLMGMDLFQGGHLTHGSEFNFSGKRYRVVSYGVSKRTEKLDYDEIMELAKAHRPKVIIAGYTSYPWAPDWKKFREIADAVGAYLMADISHPAGLCAAGYYPNPIEYAHVITFTTHKTICGPRGAVIMTADKDLGAAIDMSVFPGAQGGPHTNKFAAMAVAFKIATTPAFKDLMRRIVENAQALGESLKKRGLNLVYGGTDTHLLMVDLRPIKGKHGYPLYGEIVVRVMELAGLIANKNTVPGDEQTALGRGVRLGTPWVSQRGMGPAEMDIIADAIHKIITNIEPFTYEGLIGTLPRGKISLDVLEEVKEQVAKLAESMPADTEARRSSYPHYFFMNEPRVRRNGREVLGIWGERAEPFVQQVCTANLAGMQVGEVRRGFLLDKDGLVMDDVFVQYKGEDARRQVHYLMAVHAERAGRITAWLRGLADGYILFDNDDIFRKVEGPVVVADWVSHPELEKEADAFLSAIAGQDNPVQLGNPARAKEAFEKYPAMFDLRKSYFIGQAALLSAGAHASGGNKVEWSWQEPQDVPLKRTCLYQEHLKLTKRIIPFAGWEMPVWYTGVSDEHRATRETAALYDVSHMGVLGITGRDAETFLDLVSTNYVRWLEDGQSQY

Annotated regions:
phrase: LYQEHLKLTKRIIPFAGWEMPVWYTGVSDEHRATRETAALYDVSHMGVLGITGRDAETFLDLVSTNYVRWLEDGQSQ
type: DOMAIN
name: GCV_T_N
description: Aminomethyltransferase, folate-binding domain

phrase: IWGERAEPFVQQVCTANLAGMQVGEVRRGFLLDKDGLVMDDVFVQYKGEDARRQVHYLMAVHAERAGRITAWLRGLA
type: DOMAIN
name: GCV_T_N
description: Aminomethyltransferase, folate-binding domain

phrase: YADRRFYKGADYVNFIECLAQRRAAHLFATDAVPADQIHVNVQALSGAAANLAVLETLMQPGDVLMGMDLFQGGHLTHGSEFNFSGKRYRVVSYGVSKRTEKLDYDEIMELAKAHRPKVIIAGYTSYPWAPDWKKFREIADAVGAYLMADISHPAGLCAAGYYPNPIEYAHVITFTTHKTICGPRGAVIMTADKDLGAAIDMSVFPGAQGGPHTNKFAAMAVAFKIATTPAFKDLMRRIVENAQALGESLKKRGLNLVYGGTDTHLLMVDLRPIKGKHGYPLYGEIVVRVMELAGLIANKNTVPGDEQTALGRGVRLGTPWVSQRGMGPAEMDIIADA
type: DOMAIN
name: SHMT-like_dom
description: Serine hydroxymethyltransferase-like domain

phrase: LAKVDPDIHRIIELEEERQKRRIILIPSESIAPKPVRTALGSVFNNIYAEGYPPTR
type: DOMAIN
name: SHMT-like_dom
description: Serine hydroxymethyltransferase-like domain
Protein sequence:
MAKIDIDQIGALIQKQIEDYKADVRLESIGKVLSVADGIATVYGLSQAILGELVELPHDVKGLVFNLEQFHVGIILFGRTDLIKEGDNVRATKKIFEVPVGEDLLGRVVDPLGNPLDLKGTINADAYYPIERPAKDLMHRGFINEPLHTGIKVIDALVPIGKGQRELIIGDRQTGKSTIAIDTIINQRGKNVICVYVAIGQKDSTIANLVKLLQIKDALDYTVIINAGASKEATLLYIAPYTGSSIAEYFMEQGKDVLIIYDDLSKHAVAYRELSLLMKRPSGREAYPGDIFYLHSRLLERAGKLSKEHGGGSITALPIVETQAGDISAYIPTNIISITDGQLYLEQKLFYQGVRPAINAGLSVSRVGGSAQWKAMKQVAGTLRISLANFRELESFAQFGSDLDPSSKRRLDRGRKTVEILKQDVHELIDMPSQIVTFYALENGFMDDLNLKQIRSLMAEIEQGLSLNETGKKLRKELVEHKAIKDKALMELFIDHVRRFI

Annotated regions:
phrase: MKQVAGTLRISLANFRELESFAQFGSDLDPSSKRRLDRGRKTVEILKQDVHELIDMPSQIVTFYALENGFMDDLNLKQIRSLMAEIEQGLSLNETGKKLRKELVEHKAIKDKALMELFIDHVRR
type: DOMAIN
name: ATP_synth_asu_C
description: ATP synthase, alpha subunit, C-terminal

phrase: IFEVPVGEDLLGRVVDPLGNPLDLKGTINADAYYPIERPAKDLMHRGFINEPLHTGIKVIDALVPIGKGQRELIIGDRQTGKSTIAIDTIINQRGKNVICVYVAIGQKDSTIANLVKLLQIKDALDYTVIINAGASKEATLLYIAPYTGSSIAEYFMEQGKDVLIIYDDLSKHAVAYRELSLLMKRPSGREAYPGDIFYLHSRLLERAGKLSKEHGGGSITALPIVETQAGDISAYIPTNIISITDGQLYLEQKLFYQGVRPAINAGLSVSRV
type: DOMAIN
name: ATP_synth_F1_a_nt-bd_dom
description: ATP synthase, F1 complex, alpha subunit nucleotide-binding domain

phrase: GIKVIDALVPIGKGQRELIIGDRQTGKSTIAIDTIINQRGKNVICVYVAIGQKDSTIANLVKLLQIKDALDYTVIINAGASKEATLLYIAPYTGSSIAEYFMEQGKDVLIIYDDLSKHAVAYRELSLLMKRPSGREAYPGDIFYLHSRLLERAGKLSKEHGGGSITALPIVETQAGDISAYIPTNIISITDGQLYLEQKLFYQGVRPAINAGLSV
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_nucl-bd
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain

phrase: QWKAMKQVAGTLRISLANFRELESFAQFGSDLDPSSKRRLDRGRKTVEILKQDVHELIDMPSQIVTFYALENGFMDDLNLKQIRSLMAEIEQGLSLNETGKKLRKELVEHKAIKDKA
type: DOMAIN
name: ATP_synth_asu_C
description: ATP synthase, alpha subunit, C-terminal

phrase: PAINAGLSV
type: ACTIVE_SITE
name: ATPase_a/bsu_AS
description: ATPase, alpha/beta subunit, nucleotide-binding domain, active site

phrase: SIGKVLSVADGIATVYGLSQAILGELVELPHDVKGLVFNLEQFHVGIILFGRTDLIKEGDNVRA
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_N
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain
Protein sequence:
MSSAPNASALMKIGQLKKPYGIKGWLWVFSETDDRTAIFDIKPWWMKTATGMKPLTVKAWREQGTGIVAQFEQIPDRNVAETMNGVTLWVEQDILPEPAEDEYYWSDLVSLRVMNEQDEYLGDITEMFETGAHAIMRVAATTDSLDKEERLIPWHKQTVVKVDLTEKTVLVAWPSDY

Annotated regions:
phrase: IGQLKKPYGIKGWLWVFSETDDRTAIFDIKPWWMKTATGMKPLTVKAWREQGTGIVAQFEQIPDRNVAETMNGVTLWVEQ
type: DOMAIN
name: RimM_N
description: RimM, N-terminal

phrase: WSDLVSLRVMNEQDEYLGDITEMFETGAHAIMRVAATTDSLDKEERLIPWHKQTVVKVDLTEKTVLVAWPS
type: DOMAIN
name: PRC_RimM
description: Ribosome maturation factor RimM, PRC barrel domain
Protein sequence:
MALKKFNPTTPSRRQMTMPTFEEVTTNAPEKSLLVSLKKTGGRNAQGKITVRHHGGGAKRKYRIIDFKRNKDGIPAKVATVEYDPNRSAYIALVVYADGEKRYILAPVGLKVGDTVVSGPEADIKPGNALQLKHMPVGTFVHNIELQAGKGGQMVRSAGTSAQLMAKEGNYATLRLPSGEMRYVRIECKATVGTVSNTTHEIVNIGKAGRKRHMGWRPTVRGSVMNPCDHPHGGGEGRSPIGRPSPVTPWGKPALGYKTRKNKKYSDRFIIKRRNAK

Annotated regions:
phrase: IKPGNALQLKHMPVGTFVHNIELQAGKGGQMVRSAGTSAQLMAKEGNYATLRLPSGEMRYVRIECKATVGTVSNTTHEIVNIGKAGRKRHMGWRPTVRGSVMNPCDHPHGGGEGRSPIGRPSPVTPWGK
type: DOMAIN
name: Ribosomal_uL2_C
description: Large ribosomal subunit protein uL2, C-terminal

phrase: GRNAQGKITVRHHGGGAKRKYRIIDFKRNKDGIPAKVATVEYDPNRSAYIALVVYADGEKRYILAPVGLKVGDTVV
type: DOMAIN
name: Ribosomal_uL2_RNA-bd_dom
description: Large ribosomal subunit protein uL2, RNA-binding domain

phrase: PTVRGSVMNPC
type: CONSERVED_SITE
name: Ribosomal_uL2_CS
description: Large ribosomal subunit protein uL2, conserved site

phrase: KPGNALQLKHMPVGTFVHNIELQAGKGGQMVRSAGTSAQLMAKEGNYATLRLPSGEMRYVRIECKATVGTVSNTTHEIVNIGKAGRKRHMGWRPTVRGSVMNPCDHPHGGGEGRSPIGRPSPVTPW
type: DOMAIN
name: Ribosomal_uL2_C
description: Large ribosomal subunit protein uL2, C-terminal
Protein sequence:
MKRNGETKRRRNVAEEAEQGEDPAMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNVALIQELNGNISKVVNMYSDLNTSFSSGFHGGKNGHDGGGAAGTRA

Annotated regions:
phrase: EDPAMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNVALIQELNGNISKVVNMYSDLNTSFSSGFHGGKNG
type: DOMAIN
name: EARLY_FLOWERING_4_dom
description: Protein EARLY FLOWERING 4 domain
Protein sequence:
MAGNLFVVAAPSGAGKTTLVRMLLEQESSVNLSISYTTRHPRPGEQNGREYHFVETPEFRAMIARQEFLEWAEVHGNFYGTSKKWIADQLAAGRDVLLEIDWQGAQQVRALFPQAIGVFILPPSMEELTRRLTGRGTDSPDVIDRRLAAAQAEMRHVGEFDYVIINDQLAQALDDLRAVVRASGLSFGAQRARHAALFERMI

Annotated regions:
phrase: GNLFVVAAPSGAGKTTLVRMLLEQESSVNLSISYTTRHPRPGEQNGREYHFVETPEFRAMIARQEFLEWAEVHGNFYGTSKKWIADQLAAGRDVLLEIDWQGAQQVRALFPQAIGVFILPPSMEELTRRLTGRGTDSPDVIDRRLAAAQAEMRHVGEFDYVIINDQLAQALDDLRAVV
type: DOMAIN
name: Guanylate_kin-like_dom
description: Guanylate kinase-like domain

phrase: TTRHPRPGEQNGREYHF
type: CONSERVED_SITE
name: Guanylate_kinase_CS
description: Guanylate kinase, conserved site

phrase: AGNLFVVAAPSGAGKTTLVRMLLEQESSVNLSISYTTRHPRPGEQNGREYHFVETPEFRAMIARQEFLEWAEVHGNFYGTSKKWIADQLAAGRDVLLEIDWQGAQQVRALFPQAIGVFILPPSMEELTRRLTGRGTDSPDVIDRRLAAAQAEMRHVGEFDYVIINDQLAQALDDLRAVVRAS
type: DOMAIN
name: GK/Ca_channel_bsu
description: Guanylate kinase/L-type calcium channel beta subunit

phrase: NLFVVAAPSGAGKTTLVRMLLEQESSVNLSISYTTRHPRPGEQNGREYHFVETPEFRAMIARQEFLEWAEVHGNFYGTSKKWIADQLAAGRDVLLEIDWQGAQQVRALFPQAIGVFILPPSMEELTRRLTGRGTDSPDVIDRRLAAAQAEMRHVGEFDYVIINDQLAQALDDLRAVVR
type: DOMAIN
name: GK/Ca_channel_bsu
description: Guanylate kinase/L-type calcium channel beta subunit
Protein sequence:
MNFQGKVVLITGAGSGIGKKAAVMFAERGAKVAINDISEEKGKETVELIKSMGGEAAFIFGDVAKDAEQIVKKTVETFGRLDILVNNAGIVPYGNIEETSEEDFDKTMAVNVKGPFLLSKYAVEQMKKQGGGVIVNVSSEAGLIGIPRRCVYSVSKAALLGLTRSLAVDYVDYGIRVNAVCPGTTQSEGLMARVKASPNPEELLKKMTSRIPMKRLGKEEEIAFAILFAACDEAGFMTGSIINIDGGSTAV

Annotated regions:
phrase: SEAGLIGIPRRCVYSVSKAALLGLTRSL
type: CONSERVED_SITE
name: Sc_DH/Rdtase_CS
description: Short-chain dehydrogenase/reductase, conserved site
Protein sequence:
MLPELLFIVLLLLSYLIGSISTAIIVCKMFNLPDSRTQGSNNPGATNVLRIGGKKAAAITLIGDGLKGAIPVLIAHYLAFNMLNVTWVILVTFLGHVYPIFFSFKGGKGVATFLGALLALSYLTGLSFIITWVFVAKVLKISSLSALISTVLTPVYFYLITNNLASTYVIILICLWIFYTHQSNIKRLLNSQENKIN

Annotated regions:
Protein sequence:
MEILIATHNLHKKEEIQQILGSEYIVTSLSDYDLNDEIIEDGNTFAENALIKAKYCFEKTGKPSIGDDSGLVVEALNGRPGIFSARYAGNHNFQKNIEKVLEEMKDEPNRRAYFITVLCFKDQDGEHYFEGRVYGNLTNEVFGADGFGYDPIFVPDDYNLTFAEMLPEEKNKISHRSEALKLFLDFLNSRGGVL

Annotated regions:
Protein sequence:
MSIQISETLTFECETGNYHTFCPISCVAWLYQKIEDSFFLVIGTKTCGYFLQNALGVMIFAEPRYAMAELEEGDISAQLNDYEELKRLCFQIKKDRNPSVIIWIGTCTTEIIKMDLEGMAPKLEVELGVPIVVARANGLDYAFTQGEDTVLAAMAHRCPERDLLIDENKVIQNQTIQNIFSLFSQKKKEETLKYLELKNHPPLVLFGSLPSTVASQLSLELKRQSIQVSGWLPTQRYTDLPSLGDGVYVCGVNPFLSRTATTLIRRRKCKLIGAPFPIGPDGTRAWIEKISSVFGIKTKGLEEREQQVWQSLKNYLNLVRGKSVFFMGDNLLEISLARFLIRCGMIVYEIGIPYMDKRYQAAELALLRNTCREMCTPMPRIVEKPDNYNQIQRMRELQPDLAITGMAHANPLEARGINTKWSVEFTFAQIHGFTNAKDVLELVTRPLRRNNSLEDLGWTNLIKKDNKIKVI

Annotated regions:
phrase: CPISCVAWLYQKIEDSFFLVIGTKTCGYFLQNALGVMIFAEPRYAMAELEEGDISAQLNDYEELKRLCFQIKKDRNPSVIIWIGTCTTEIIKMDLEGMAPKLEVELGVPIVVARANGLDYAFTQGEDTVLAAMAHRCPERDLLIDENKVIQNQTIQNIFSLFSQKKKEETLKYLELKNHPPLVLFGSLPSTVASQLSLELKRQSIQVSGWLPTQRYTDLPSLGDGVYVCGVNPFLSRTATTLIRRRKCKLIGAPFPIGPDGTRAWIEKISSVFGIKTKGLEEREQQVWQSLKNYLNLVRGKSVFFMGDNLLEISLARFLIRCGMIVYEIGIPYMDKRYQAAELALLRNTCREMCTPMPRIVEKPDNYNQIQRMRELQPDLAITGMAHANPLEARGINTKWSVEFTFAQIHGFTNAKDVLELV
type: DOMAIN
name: Nase/OxRdtase_comp1
description: Nitrogenase/oxidoreductase, component 1
Protein sequence:
MQTTQNRLKTKRYASFFLNPKLNRPIQKKGWIKKADFNQLTDSLCKQSLKAYNEKLYSPLSQFKIPDFLNIQRSSFRQFLKSGLITEFKNCKSITNSNQTFEVFFYAEHYKLNRPKWTPKQAILKKKSYSSQLYLPIQLSNYQTEEVHLQWVLLANLPLMTKNGHFILNGCPRVLMNQIVRSPGVYFRKVVKNQKTVYSADFIAQRGSWLRLEVDTKKGDIWAKLKKTPKIPIFTFLRALGLTLPILNNSIDFAKLRYLLQFKEESKRSKKIKDFLGPGINNSLDIVEFRSLLKSLKKYMKPKPAKKSSKKQKTKKIKKWLTPFVCTTYFQSLLELCQKLYPQKKFLELDPKLAQKFLFRKFQNPRTYDLSILGREKINKKLGISIPLEKTILTSQDVLFACLFLMDLLQGLVISDDIDDLKNRKIKPSGELIQTQLSTGLIRLEKIIREKLKQPKQDSDSFSNLFSVKPLNQAFRDFFGTNPLSQLMDQTNALSEITHKRRLSSLGPGGINRETAGMAIRGIHPTHYGRICPIETPEGQNAGLVNSFTIFSHLNTKSFIETPFYKMYKGFILKNKNPFLFSSDQERNLVLAPGDIQTSLFHFLPPGVPIPSRQFKEFKRVSRNEINFIAVSPIQMISIATSLIPFLEHNDGNRALMGSNMQRQAVPTVRPSKPIVGTGLESRVISDVGHGLQVQKSGFVSYVDGNKIIIYSKKRIDQPFFFDTKKLHFPKKKVPFLNLDLQQQNTCRSSFKKKLVKSANIFTFKEKQ

Annotated regions:
phrase: RPKWTPKQAILKKKSYSSQLYLPIQLSNYQTEEVHLQWVLLANLPLMTKNGHFILNGCPRVLMNQIVRSPGVYFRKVVKNQKTVYSADFIAQRGSWLRLEVDTKKGDIWAKLKKTPKIPIFTFLRALGLTLPILNNSIDFAKLRYLLQFKEESKRSKKIKDFLGPGINNSLDIVEFRSLLKSLKKYMKPKPAKKSSKKQKTKKIKKWLTPFVCTTYFQSLLELCQKLYPQKKFLELDPKLAQKFLFRKFQNPRTYDLSILGREKINKKLGISIPLEKTILTSQDVLFACLFLMDLLQGLVISDDIDDLKNRKIKPSGELIQTQLSTGLIRLEKIIREKLKQPKQDSDSFSNL
type: DOMAIN
name: RNA_pol_bsu_protrusion
description: RNA polymerase, beta subunit, protrusion

phrase: AQKFLFRKFQNPRTYDLSILGREKINKKLGISIPLEKTILTSQDVLFACLFLMDLLQGLVISDDIDDLKNRKI
type: DOMAIN
name: RNA_pol_Rpb2_2
description: RNA polymerase Rpb2, domain 2

phrase: RSPGVYFRKVVKNQKTVYSADFIAQRGSWLRLEVDTKKGDIWAKLKKTPKIPIFTFLRALGLTLPILNNSIDFAKLRYLLQFKEESKRSKK
type: DOMAIN
name: RNA_pol_Rpb2_2
description: RNA polymerase Rpb2, domain 2

phrase: QLMDQTNALSEITHKRRLSSLGPGGINRETAGMAIRGIHPTHYGRICPIETPEGQNAGLVNSFTIFS
type: DOMAIN
name: RNA_pol_Rpb2_3
description: RNA polymerase Rpb2, domain 3
Protein sequence:
MRRFTGDRLLVATHNRGKLDEIAHLLEPFGITVIGAAEMSLPEPAETETTFVGNARIKAHAAARATGLPALADDSGLSVEALGGAPGVYTADWAETGSGRDFGMAMERVWRELESASAPEPRRAEFRCTFVLAWPDGHDEVFEGCMPGRIVWPMRGDQGHGFDPIFQPEGSDLTFGEMDRWQKNRISHRGRAFEKLVAAFDR

Annotated regions:
Protein sequence:
MTTFLSDSEHPQDVKAPPKSARRRAREFVLQGLYQWRVGGADEASIEAYAPEMEGFAKADREFFVGTLRGVISQQEKLIEQVSTHIDRPFNELSPVEACILMLGSFEMLNHAETPYRVIINEAIELTKAFGGTDGHKYVNGVLDKVAAILRPDEVAARKQAKK

Annotated regions:
phrase: RRAREFVLQGLYQWRVGGADEASIEAYAPEMEGFAKADREFFVGTLRGVISQQEKLIEQVSTHIDRPFNELSPVEACILMLGSFEMLNHAETPYRVIINEAIELTKAFGGTDGHKYVNGVLDKV
type: DOMAIN
name: NusB_RsmB_TIM44
description: NusB/RsmB/TIM44
Protein sequence:
SLLQLVSQGQASPSEPETRLSLSSSSIKGGNPAECEGSESELKDGASDSDSKVDSGPPEVPVTSDDTPEVLNKALSGLSSRWRNWWVRGILTMAMISFFFFIIYMGPIVLMMIVLCVQIKCFQEIIHIGYSVYHSYHLPWFRSLSWYFLLCVNYFFYGETVTDYFFSLVQREEPLRILSKYHRFISFALYLTGFCMFVLSLVKKHYRLQFYMFGWTHVTLLIVVTQSHLIIHNLFEGMICLCLPPQVHRAHFLRHLQRHHGLHVRILLRTHTPHQGGGWFCFLNIPCRPQLSPKKTWEGFIGGFFATVVFGILLSYVMAGYRYFVCPVEFNNDTNRFQVDCEPSELFQLTDYVLPAFLESFTGWTTVRLYPFQIHSVALSAFASIMGPFGGFFASGFKRAFKIKDFANTIPGHGGIMDRFDCQYLMATFVNVYIASFIRGPNPSKVIQQLLALRPDQQLYIFNSLKTHLTERGLLPALERAAA

Annotated regions:
Protein sequence:
MMPKNSSGPPNPDELASLDASDPLAWTRAEFEIPQARACGGDIDGESIYFCGNSLGLLSKRARQHVVEELDVWSSSAVTGHFAHPQSRPWKHVDAPLTPHLARIIGARDEEVAHSSTLTSNLHNLFVSFYRPTKQRWRIVIERGSFPSDWYAIHSHPRIHDKILSSEQIEDSIVALTPRPGEETLRTEDIISTLEEYGETIAIVWLPLVQYYSGQLFDIPPVAAKTHEIGALIGLDMAHGIGNVECKLDEWEVDFAVWCTYKYLNSGPSGIGGYFIRTGLDDGGRRLAGWWGNESATRFQMAPTFRPTPGAKGYQHSCTPVLSSIPLLATLELIDKAGFSNMIAKGRRLTNTMEELLKSSRFYIPSRSASSKQPFPSAEEEDDRLGFRILTPPAPWRGTQLSLFISPHRPEDGDGKGVMPRVFGRMIKKGLVGDEREPSVIRLSPVVLYNTFQEVGRAVKILEEAMEEEEDGMRIGGNQGKGSERDVISG

Annotated regions:
phrase: GETIAIVWLPLVQYYSGQLFDIPPVAAKTHEIGALIGLDMAHGIGNVECKLDEWEVDFAVWCTYKYLNSGPSGIGGYFIRTGLDDGGRRLAGWWGNESATRFQMAPTFRPTPGAKGYQHSCTPVLSSIPLLATLELIDKAGFSNMIAKGRRLTNTMEELLKSSR
type: DOMAIN
name: Aminotrans_V_dom
description: Aminotransferase class V domain
Protein sequence:
MCTMYEWIAKLNAVPFIKFFLMTTFSYSDPKSTEVSENPILLPSILELSREKLALAVIDMGEKTFRSTQLWRSLYRERVLSFDDISTLSKSFRQRLNETYSISPLSKSMFLTSSDSSTSKALYRLNDGELIESVLMRYETDGHRRNRKTACISTQAGCALGCTFCATGQQGFRRNLTVGEIVAQVIELDRIAYKEDQVQVVEGKRTKGELQGVTNVVFMGMGEPLANYDNVMASIKVLNDAQGLNIGARHITLSTVGLVPQILKLAEEALQINLAISLHAPDNVTRSQTMPVNRRYPVEELIRACHKYADLTNRRIFFEYVLLKEQNDSIDQARKLGRLLNGLHCHVNLIPVNPTKQGPFERTDLQSAKEFQGGLKQYGIPSTIRMEKGIDINAGCGQLRERAVDILGT

Annotated regions:
phrase: SILELSREKLALAVIDMGEKTFRSTQLWRSLYRERVLSFDDISTLSKSFRQRLNETYSISPLSKSMFLTSSDSSTSKALYRLNDGELIESVLMRYETDGHRRNRKTACISTQAGCALGCTFCATGQQGFRRNLTVGEIVAQVIELDRIAYKEDQVQVVEGKRTKGELQGVTNVVFMGMGEPLANYDNVMASIKVLNDAQGLNIGARHITLSTVGLVPQILKLAEEALQINLAISLHAPDNVTRSQTMPVNRRYPVEELIRACHKYADLTNRRIFFEYVLLKEQNDSIDQARKLGRLLNGLHCHVNLIPVNPTKQGPFERTDLQSAKEFQGGLKQYGIPSTIRMEKGIDINAGCGQLRER
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: ISTQAGCALGCTFCATGQQGFRRNLTVGEIVAQVIELDRIAYKEDQVQVVEGKRTKGELQGVTNVVFMGMGEPLANYDNVMASIKVLNDAQGLNIGARHITLSTVGLVPQILKLAEEALQINLAISLHAPDNVTRSQTMPVNRRYPVEELIRACHKYADLTNRRIFFEYVLLKEQND
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: RRNRKTACISTQAGCALGCTFCATGQQGFRRNLTVGEIVAQVIELDRIAYKEDQVQVVEGKRTKGELQGVTNVVFMGMGEPLANYDNVMASIKVLNDAQGLNIGARHITLSTVGLVPQILKLAEEALQINLAISLHAPDNVTRSQTMPVNRRYPVEELIRACHKYADLTNRRIFFEYVLLKEQNDSIDQARKLGRLLNGLHCHVNLIPVNPTKQGPFERTDLQSAKEFQGGLKQYGIPSTIRMEKGI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: ILELSREKLALAVIDMGEKTFRSTQLWRSLYRERVLSFDDISTLSKSFRQRLNETYS
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MSQEDQDRKTILSRRQLLGTTAAIAAAGAAGVGGGLALNGGVVSRAAASEKGGQEFEVKPGELDEYYVFFSSGQTGEVRIMGAPSMREMMRIPVFNRCSATGWGLTNESRKILTEGLLPETVEFLKDRGGIYLNGDLHHPHPSQTDGTYDGRYLFVNDKANTRVARIRLDVMKCDKIIQLPNQHTVHGLRVQKYPKTGYVFCNGEDRVPIPNDGKILDDSKQYHSIFSAVDGETMKVAWQVMVDGNLDNVDADYQGKYAFSTCYNSEEGVNLEQTMAKEQDWIVIFNLKRIEDAVKSGDYKEMGGVPVIDGRHGSPYTRYVPVANSPHGINTAPDGIHVVANGKLSPTVTVFDVRKFDDLFDDKIKPRDTVVAEPELGLGPLHTAYDGRGNAYTTLFIDSQICKWSIEDAKRSFAGEKVDPIRQKLDVHYQPGHNHTSMGQTKEADGKWLISLNKFSKDRYLNVGPLKPENDQLIDISGDQMVLVHDSPSFAEPHDATLVHRSKINPISIWDRADPFFEDAVKQAKADGIDLMVDSEVIRDGNKVRVYMTSSAPAFGLESFSVKQGDEVTVYVTNIDEVEDLTHGFAIVNYGINMEVAPQATASVTFKASKPGVYWYYCSWFCHAMHMEMQGRMFVEPQGA

Annotated regions:
phrase: LPNQHTVHGLRVQKYPKTGYVFCNGEDRVPIPNDGKILDDSKQYHSIFSAVDGETMKVAWQVMVDGNLD
type: REPEAT
name: NOS_propeller_2
description: Nitrous oxide reductase, propeller repeat 2

phrase: MTSSAPAFGLESFSVKQGDEVTVYVTNIDEVEDLTHGFAIVNYGINMEVAPQATASVTFKASKPGVYWYYCSWFCHAMHMEMQGRMF
type: DOMAIN
name: EfeO_Cupredoxin
description: EfeO-type cupredoxin-like domain

phrase: RDGNKVRVYMTSSAPAFGLESFSVKQGDEVTVYVTNIDEVEDLTHGFAIVNYGINMEVAPQATASVTFKASKPGVYWYYCSWFCHAMHMEMQGRMFVEPQG
type: DOMAIN
name: CcO_II-like_C
description: Cytochrome c oxidase subunit II-like C-terminal

phrase: MSQEDQDRKTILSRRQLLGTTAAIAAAGAAGVGGGLALNGGVVSRAA
type: CONSERVED_SITE
name: TAT_signal
description: Twin-arginine translocation pathway, signal sequence

phrase: KLDVHYQPGHNHTSMGQTKEADGKWLISLNKFSKDRYLNVGPLKPENDQLIDISGDQMVLVHDSPSFAEP
type: REPEAT
name: Nos_propeller
description: Nitrous oxide reductase, propeller repeat 1

phrase: KVRVYMTSSAPAFGLESFSVKQGDEVTVYVTNIDEVEDLTHGFAIVNYGINMEVAPQATASVTFKASKPGVYWYYCSWFCHAMHMEMQGRMFVE
type: DOMAIN
name: N2OR_C
description: Nitrous-oxide reductase, C-terminal
Protein sequence:
MEAALAACALPSLRILNTKPRFRCSFSNPSLPISPNSLITRKSSRFTTAVSSPPSSSAATSTNSPPEPEALFEPGSDKFDWYANWYPVMPICDLDKKVPHGKKVMGIDLVVWWDRNEKQWKVMDDTCPHRLAPLSDGRIDQWGRLQCVYHGWCFNGSGDCKLIPQAPPDGPPVHTFKQACVAVYPSTVQHEIIWFWPNSDPKYKNIIETNKPPYIPELEDPSFTKLMGNRDIPYGYDVLVENLMDPAHVPYAHYGLMRFPKPKGKYIICISNSCFNPFTNLQILLAEKIDREGGKPLEINVKKLDNKGFFSKQEWGYSNFIAPCVYRSSTDPLPEQEHEYPAPAASDKAALSKRRLSLIFICIPVSPGRSRLIWTFPRNFGVFIDKIVPRWVFHIGQNTILDSDLHLLHVEERKILERGPENWQKACFIPTKSDANVVTFRRWFNKYSEARVDWRGKFDPFLLPPTPPREQLFDRYWSHVENCSSCKKAHKYLNALEVILQIASVAMIGVMAVLKQTTMSNVARIAVLVAAVLSFAASKWLSHFIYKTFHYHDYNHAVV

Annotated regions:
phrase: FIAPCVYRSSTDPLPEQEHEYPAPAASDKAALSKRRLSLIFICIPVSPGRSRLIWTFPRNFGVFIDKIVPRWVFHIGQNTILDSDLHLLHVEERKILER
type: DOMAIN
name: PaO
description: Pheophorbide a oxygenase

phrase: WYPVMPICDLDKKVPHGKKVMGIDLVVWWDRNEKQWKVMDDTCPHRLAPLSDGRIDQWGRLQCVYHGWCFNGSGDCKLIPQAPPDGPPVHTFKQACVAVYPSTVQHEIIW
type: DOMAIN
name: Rieske_2Fe-2S
description: Rieske [2Fe-2S] iron-sulphur domain

phrase: NWYPVMPICDLDKKVPHGKKVMGIDLVVWWDRNEKQWKVMDDTCPHRLAPLSDGRIDQWGRLQCVYHGWCFNGSGDCKLIPQAPPDGPP
type: DOMAIN
name: Rieske_2Fe-2S
description: Rieske [2Fe-2S] iron-sulphur domain