nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MENQFQDGKEEVIEAWYMDDSEEDQRLPHHREPKEFIPLSKLSELGILSWRLNADDWENDENLKKIREARGYSYMDICDVCPEKLPNYEVKIKNFFEEHLHTDEEIRYCLEGSGYFDVRDQNDQWIRVAVKKGGMIVLPAGMYHRFTLDSDNYIKAMRLFVGEPVWTPYNRPHDHLPARLLLTHWGFCMISERSTLTKLSTEESKMEMIVPGIVKEEWSPEEGEEEAPRPMEGLHEVGTPPFLTKTFDLVADPATDGVVSWGRAGNSFVVWDPHVFAAVLLPRFFKHNNFSSFVRQLNTYGFRKIDPDRWEFANDGFLRGQRHLLKMIKRRRPLSYLPASQALGTCLEVGQFGMDEEIDRLKRDKNILLAEVVKLRHEQQSTKADMRAMEERLQNAEQKQVQMMGFLARAMQNPDFFHQLIQHQDKMKGLEDTFSKKRTRSIDIVPFLRPEEVSQSDQLESTFPFDPRPFAELNVEPPKSELENLALNIQGLGKGKQDVKLTRNQASVETELTDDFWEELLNEGARDETGTPELERRRPRYVDALAQRLGYLSNNSQK

Annotated regions:
phrase: LPRFFKHNNFSSFVRQLNTYGFRK
type: DOMAIN
name: HSF_DNA-bd
description: Heat shock factor (HSF)-type, DNA-binding

phrase: FLTKTFDLVADPATDGVVSWGRAGNSFVVWDPHVFAAVLLPRFFKHNNFSSFVRQLNTYGFRKIDPDRWEFANDGFLRGQRHLLKMIKR
type: DOMAIN
name: HSF_DNA-bd
description: Heat shock factor (HSF)-type, DNA-binding

phrase: GTPPFLTKTFDLVADPATDGVVSWGRAGNSFVVWDPHVFAAVLLPRFFKHNNFSSFVRQLNTYGFRKIDPDRWEFANDGFLRGQRHLLKMIKR
type: DOMAIN
name: HSF_DNA-bd
description: Heat shock factor (HSF)-type, DNA-binding

phrase: FLTKTFDLVADPATDGVVSWGRA
type: DOMAIN
name: HSF_DNA-bd
description: Heat shock factor (HSF)-type, DNA-binding

phrase: LLPRFFKHNNFS
type: DOMAIN
name: HSF_DNA-bd
description: Heat shock factor (HSF)-type, DNA-binding

phrase: FVRQLNTYGFRK
type: DOMAIN
name: HSF_DNA-bd
description: Heat shock factor (HSF)-type, DNA-binding
Protein sequence:
MAKNLILWLVIAVVLMSVFQSFGPGDSAGRQVDYTSFVQEIGQDKIQDVQFNNRELKVTRRDGTGYVTYMPVMQDPKLLDDLINHKVQVRGTPPEEPSILASIFISWFPMLLLIGVWIFFMRQMQGGGGKGAMSFGKSKARMMSEEQIKTTFNDVAGCDEAKEDVKELVDYLRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVHMRKVPLGSDVEASLIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEFELAKDKIMMGAERKSMVMSEETKESTAYHEAGHAIVGRLVPEHDPVYKVSIIPRGRALGVTMYLPEQDRVSMSRQHLESMISSLYGGRLAEELIYGPDKVSTGASNDIERATDIARKMVTQWGFSEKLGPLLYAEDEGEVFLGRSVTQSKHMSDETARLIDSEIRELIDRNYTRARKIIEENMDIMHAMKDALMKYETIDAAQIDDLMARRPVREPAGWSANDNSDNTPSTPNAEASADVPPSSSGEVETGNKPVDQDGKSEA

Annotated regions:
phrase: VLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: IPTGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LILWLVIAVVLMSVFQSFGPGDSAGRQVDYTSFVQEIGQDKIQDVQFNNRELKVTRRDGTGYVTYMPVMQDPKLLDDLINHKVQVRGTP
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular

phrase: DVEASLIARGTPGFSGADLANLVNEAALFAARGNKRVVSMVEF
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: IIVIAATNRPDVLDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: MVMSEETKESTAYHEAGHAIVGRLVPEHDPVYKVSIIPRGRALGVTMYLPEQDRVSMSRQHLESMISSLYGGRLAEELIYGPDKVSTGASNDIERATDIARKMVTQWGFSEKLGPLLYAEDEGEVFLGRSVTQSKHMSDETARLIDSEIRELIDRNYTRARKIIEENMDIMHAMKDALMKYETIDAAQID
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41
Protein sequence:
MAAGVDFGDLELFEAFDPPEESTPKPVHTRFKDDEEEEDDDDDENGVGDAELQEQLRRCEATIEQLRAENQELKRKLNILTRPSGILVSNTKIDGPLLQILFMNNAISKQYHQEIEEFVSNLVKRFEEQQKNDVEKTSFSLLPQPSSVMLEEDHKVEESCAVKNNKEAFSVVGSVLYFTNFCLDKLGQPLLNENPQLTEGWEIPKYQQVFSHIVPLEGQEMQVKAKRPKPHCFNCGSEEHQMKECPMPRNAARISEKRKEYMDACGEASGQSFQQRYHAEEVEERFGRFKPGVISEELQDALGVTDKSLPPFIYRMRQLGYPPGWLKEAELENSGLALYDGNDDADGETETGEIQNKNVTYDLSKLVNYPGFNISTPRGIPDEWRMFGSIPMQACQQKDVFASYLNSNIQSPSMRSSGKRSSSQSSPNSPKKQRKEGSAAASPADMELDSDVEIPPGSQSSKAFQFQPPLPPGTPPPLPQGTPPPLFTPPLPKGTPPLTPSDSPQARPAASAMDEDALTLEELEEQQRQIWAALQQAEGGNGDSDVPGDTPLTGNSVASSPCPNEFDLPVPEGKALEKPVLAEPQEPAASVDTAGPEPSCSPAAGAAVLSQREEEAAAEGGPGDALLDNGGVLNMNMSNGSNQQPIHPDSRPPMAPKTHSPVPDMSKFATGITPFEFENMAESTGMYLRIRNLLKNSPRNQQKNKKTCE

Annotated regions:
phrase: HCFNCGSEEHQMKECP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: CFNCGSEEHQMKEC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: HCFNCGSEEHQMKEC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: KPGVISEELQDALGVTDKSLPPFIYRMRQLGYPPGWLKEAELENSGL
type: DOMAIN
name: PSP_pro-rich
description: PSP, proline-rich

phrase: FGRFKPGVISEELQDALGVTDKSLPPFIYRMRQLGYPPGWLKEAELENSGLA
type: DOMAIN
name: PSP_pro-rich
description: PSP, proline-rich
Protein sequence:
MIKNYKLLLFTTFTLFFITFVSGSSILKANFYYKVDWENVQCFVPPCPKYTIQKLNTNEKSQKILDFIFPNGLNKTTLLGDESKTLIVLGTTQPSSKFPNNATDFLVTRVYKSLPLGNKQTSTDKYYMFGDNGTRCKTSPCPNIVAALLNVHSQEIINTISQPYEKNVGFLDSVWLSSKNIRSDDFGLIGQGTIKNGVISISNSFIYLPDPPIKCPELPLLKCVEGNSMTYSRDENRCLVSPRCTKFGVCTLSIPLCNKGYRLVSFPSTELNGCPKFFCDPEFVNKTHK

Annotated regions:
Protein sequence:
MEEQQPPSIKKKIVDFLTNFLKKRPSHEDLRRDNILVAPNNVSPAIQPSRYELEGHLNPSSHNRDDSSNNNNNNNNNNNTVEYSRGHSKSHSRSDSKHHNRENSKSDRDNSRSDNIRFGRKDTFKNAWDYLRNIDFTFSKTKYGNTVVHRLKHPQFGLSPEELQSLYPDQPHGIPIVLTKCFEYLSKHLETEGLFRVPGSNREVSLLKFKIEDGDLDFSEVLIPYNICGLISTFFKELPEPLIPFDYYNDAILITKLGSKDKYIIGLRDLVLSLPPANLCMLRKLLEFLLTVEKKNEFNKMTISNISIIFGVTLLKDPDTVDPMKSLNNIQAQSTIIKYMLEYFNDIFKEASVVKAYRKSIVPKEPMDTTSISYLDPAESNGGSPRTSNTPYQQQHQLSSQSMANIKPRPPSRSKMMRETIVLSPRVSGGNNQVYANATMTRPMSRLFFDPEIIPSPPPTTTTTTTTTTNTTTTTTTTNTTPNNTTTVNIQQKPVPPKPNLIPRKLPPNPNYSTYPAPLPPRQPNTIPLAPIPPPKPNSTYKKQITQPPPPRKPTSPSPPIATLKPTSKSDFIPSTNNNLNNNNTTTTTSSLISIPKAKPPPPKRNNVVSPAIEEPINPNLNINSTTTTPTPPLASFKNNGTISSGSKSNPNLQNLLNTNQPLVSSNGPPNKPPPQPFELLKSKPITTTPTIKKGVTFSETPKISNSPPSPSSSSPSPPHNQPIIVNKPIPSKSAPPPVRTTSSPSIVTKKFVPTIPTQTTTASSSST

Annotated regions:
phrase: EELQSLYPDQPHGIPIVLTKCFEYLSKHLETEGLFRVPGSNREVSLLKFKIEDGDLDFSEVLIPYNICGLISTFFKELPEPLIPFDYYNDAILITKLGSKDKYIIGLRDLVLSLPPANLCMLRKLLEFLLTVEKKNEFNKMTISNISIIFGVTLLKDPDTVDPMKSLNNIQAQSTIIKYMLEYFNDI
type: DOMAIN
name: RhoGAP_dom
description: Rho GTPase-activating protein domain

phrase: HGIPIVLTKCFEYLSKHLETEGLFRVPGSNREVSLLKFKIEDGDLDFSEVLIPYNICGLISTFFKELPEPLIPFDYYNDAILITKLGSKDKYIIGLRDLVLSLPPANLCMLRKLLEFLLTVEKKNEFNKMTISNISIIFGVTLLKDPDTVDPMKSLNNIQAQSTIIKYMLEYF
type: DOMAIN
name: RhoGAP_dom
description: Rho GTPase-activating protein domain

phrase: PIVLTKCFEYLSKHLETEGLFRVPGSNREVSLLKFKIEDGDLDFSEVLIPYNICGLISTFFKELPEPLIPFDYYNDAILITKLGSKDKYIIGLRDLVLSLPPANLCMLRKLLEFLLTVEKKNEFNKMTISNISIIFGVTLLKD
type: DOMAIN
name: RhoGAP_dom
description: Rho GTPase-activating protein domain
Protein sequence:
MELTKIFLAFLCIGVSYSLGSFPSGFIAGKWLKGIDLRKVGSGSTGATNVLRHVGKKAALIVFLIDVSKGIGSILIAKSLFLSPSFHVICGIAALSGHIWPIWLNWKGGKAVATGLGVFLGISWQVGLASLGIFMAVLSSSKIVSLSSISAAISLPILMFLSLQEASFLNAYIIASFAAMIMVLWRHRANLKRLLNGDEPRIGKIN

Annotated regions:
Protein sequence:
MESTSAFYLHVRPDNVAVVTIDVPDEKMNTLKAEFGPQVRAILRQIRDNKALEGVVFISGKPDNFIAGADINMIASCKTAQEAEALARQGQQIMADIHALPIPVVAAINGPCLGGGLELALACHRRVCTDSPKTLLGLPEVQLGLLPGSGGTQRLPRLTGVSTALEMILAGKQLRPRQALKVGLVDDVVPSSILLDAAVALVKKGRGNGRRLPVRERVLAGPLGRALLFKMVTKQTEQKTHGNYPAARRIIDVVRTGLEQGSASGYEAEAKAFGELAMTPQSAALRGIFFASTELKKETGSEAQPRPLRAVGVLGGGLMGGGIAYVTASKGKLPVRIKDINEKGISHALKYSWDLLEKKVRRRHLKATERDSQMALISGSTDYRGFHHRDIVVEAVFEDLALKQKMVQEVEQHAAPHTIFASNTSSLPIGDIAANAARPEQVIGLHYFSPVDKMPLVEVIPHAGTSAETIATTVQLAKKQGKTPIVVADCAGFYVNRILAPYMNEAMRCLMEGESIEHIDDALVKFGFPVGPIQLLDEVGIDVGTKIIPVLEKAYGSRFSAPHDAVAAILKDDRKGRKNGRGFYLYPAKGRKSKKQPDPAIYTLTGVKPVNRLTGAQIAERCVMMMLNEAARCLDEGVVRSPRDGDIGGVFGIGFPPFLGGPFRYMDRLGAGEVVATLQRLTAQYGERFAPCDRLIRMAEERLVFWSELNQKEKIEVKQE

Annotated regions:
phrase: GFYVNRILAPYMNEAMRCLMEGESIEHIDDALVKFGFPVGPIQLLDEVGIDVGTKIIPVLEKAYGSRFSAPHDAVAAILKDDRKGRKNGRGFYL
type: DOMAIN
name: 3HC_DH_C
description: 3-hydroxyacyl-CoA dehydrogenase, C-terminal

phrase: IAERCVMMMLNEAARCLDEGVVRSPRDGDIGGVFGIGFPPFLGGPFRYMDRLGAGEVVATLQRLTAQYGERFAPCDRLIRMAE
type: DOMAIN
name: 3HC_DH_C
description: 3-hydroxyacyl-CoA dehydrogenase, C-terminal

phrase: DCAGFYVNRILAPYMNEAMRCLMEG
type: CONSERVED_SITE
name: 3-OHacyl-CoA_DH_CS
description: 3-hydroxyacyl-CoA dehydrogenase, conserved site

phrase: VGVLGGGLMGGGIAYVTASKGKLPVRIKDINEKGISHALKYSWDLLEKKVRRRHLKATERDSQMALISGSTDYRGFHHRDIVVEAVFEDLALKQKMVQEVEQHAAPHTIFASNTSSLPIGDIAANAARPEQVIGLHYFSPVDKMPLVEVIPHAGTSAETIATTVQLAKKQGKTPIVVAD
type: DOMAIN
name: 3-OHacyl-CoA_DH_NAD-bd
description: 3-hydroxyacyl-CoA dehydrogenase, NAD binding
Protein sequence:
MLTHANWQEPNINFQVDEMYRGALEVLRWSYQEYGNEIVYACSFGIEGIVLIDLISKVKPNATIVFLDTDVHFKETYETIRRVKEKYPQLNIVMKKSALTLEQQAAQYGEELWKSDPNQCCAIRKIKPLHEALSGTKAWISGLRREQSPTRQQTNFLNRDDKFKSIKVCPLIHWTWKDVWRYVSKNNLPYNPLHDQGYPSIGCEHCTKPAFTMDDLRSGRWQGSGKTECGLHE

Annotated regions:
phrase: EIVYACSFGIEGIVLIDLISKVKPNATIVFLDTDVHFKETYETIRRVKEKYPQLNIVMKKSALTLEQQAAQYGEELWKSDPNQCCAIRKIKPLHEALSGTKAWISGLRREQSPTRQQTNFLNRDDKFKSIKVCPLIHWTWKDVWRYVSKNNLPYNPLHDQGYPSIGCEHCTK
type: DOMAIN
name: PAPS_reduct
description: Phosphoadenosine phosphosulphate reductase
Protein sequence:
MKNNKIYIKTWGCQMNEYDSALITQILKQKHGYENTKDPKLANVLILNTCSIREKAQEKVFHQLGRWKKLKQKNPNLIIAVGGCVATQEGKNIYKRANYVDIIFGTQTLHYLPNMIQEVKKNKKSVTNIDFPLTEKFNFIEYPRKPKVTAFVSIMEGCNKFCSFCIVPYTRGHEISRPVDDILLEISTLSSRGVKEIHLLGQNVNSYKGKTFNGDICKFSNLLRLVASIDGIDRIRFTTSNPFEFTDDIIEIYAEIPKIVSFLHLPVQSGSNRILQLMKRMHTIDEYKTIINKILKLRPNIQISSDFIIGFPGETLIDFEQTLQLIKDLNIDMSYSFIYSPRPGTPASELQDNVTLCEKQKRLHILQTLIRNNTTMWNQKMLGSIQSVLVEGRSQKNPKELFGRTENNRIVNFKGNQNMIGEFINLKITKINPNSLRGSYEKRNN

Annotated regions:
phrase: NKIYIKTWGCQMNEYDSALITQILKQKHGYENTKDPKLANVLILNTCSIREKAQEKVFHQLGRWKKLKQKNPNLIIAVGGCVATQEGKNIYKRANYVDIIFGTQTLHYLPNMIQEVK
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: VTAFVSIMEGCNKFCSFCIVPYTRGHEISRPVDDILLEISTLSSRGVKEIHLLGQNVNSYKGKTFNGDICKFSNLLRLVASIDGIDRIRFTTSNPFEFTDDIIEIYAEIPKIVSFLHLPVQSGSNRILQLMKRMHTIDEYKTIINKILKLRPNIQISSDFIIGFPGETLIDFEQTLQLIKDLNIDMSYSFIYSPRPGTPASELQDNVTLCEKQKRLHILQ
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: KIYIKTWGCQMNEYDSALITQILKQKHGYENTKDPKLANVLILNTCSIREKAQEKVFHQLGRWKKLKQKNPNLIIAVGGCVATQEGKNIYKRANYVDIIF
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: QKMLGSIQSVLVEGRSQKNPKELFGRTENNRIVNFKGNQNMIGEFINLKITKINPNSLRGSYE
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: VSIMEGCNKFCSFCIVPYTR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: VSIMEGCNKFCSFCIVPYTRGHEISRPVDDILLEISTLSSRGVKEIHLLGQNVNSYKGKTFNGDICKFSNLLRLVASIDGIDRIRFTTSNPFEFTDDIIEIYAEIPKIVSFLHLPVQSGSNRILQLMKRMHTIDEYKTIINKILKLRPNIQISSDFIIGFPGETLIDFEQTLQL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: QKMLGSIQSVLVEGRSQKNPKELFGRTENNRIVNFKGNQNMIGEFINLKITKINPNSLRG
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: RKPKVTAFVSIMEGCNKFCSFCIVPYTRGHEISRPVDDILLEISTLSSRGVKEIHLLGQNVNSYKGKTFNGDICKFSNLLRLVASIDGIDRIRFTTSNPFEFTDDIIEIYAEIPKIVSFLHLPVQSGSNRILQLMKRMHTIDEYKTIINKILKLRPNIQISSDFIIGFPGETLIDFEQTLQLIKDLNIDMSYSFIYSPRPGTPASELQDNVTLCEKQKRLHILQTLIRNNTT
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MKARGMKRNYQHLWRWGTWLFWMIIMCKATENLWVTVYYGVPVWRDAETTLFCASDAKAYDKEVHNVWATHACVPTDPNPQEIILENVTEEFDMWNNNMVEQMQLDIISLWDQSLKPCVKLTPLCVTLNCTEPNSTSTSSSNSTSSDWSEDIRNCSFNMTTELRDKRRTVYSLFYKLDLVSTDSNNSGQYRLITCNTSTITQACPKVSFEPIPIYYCTPAGFAIIKCRDPNFNGTGPCKNVSTVQCTHGIKPVVSTQLLLNGSLAEKEIMIRSKNITDNSKNIIVQLTEPVNITCVRPGNNTRTSIRIGPGQAYFRTGDVIGNIRKAYCEVNRTAWNSTLQKISTQLRKYFNDKTIIFKNSSGGDLEVTTHSFNCGGEFFYCNTTDLFDSTWDTNGTGTYNTQDNGTSIILQCRIKQFINMWQRVEQAMYAPPIAGNIKCESNITGLILTRDGGAGGTNSSNETFRPIGGDMRDNWRSELYKYKVVKIEPIGIAPTXARRRVVEREKRAIGLGAAFLGFLGAAGSTMGAASLTLTVQARQLLSGIVQQQSNLLRAIEAQQHLLKLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTNVPWNSSWSNKSQTEIWGNMTWMQWDKEIINYTNIIYELIEESQNQQEKNEKDLLALDKWTGLWSWFDISNWLWYIKIFIIIVGGLIGLRIVFAVLSIINRARQGYSPLSLQTLIPHPEGPDRPGRIKEEGGEQXNARSIRLVSGFLALAWDDLRXLCLFSYHRL

Annotated regions:
phrase: VQARQLLSGIVQQQSNLLRAIEAQQHLLKLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTNVPWNSSWSNKSQTEIWGNMTWMQWDKEIINYTNIIYELIEESQNQQEKNEKDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWRDAETTLFCASDAKAYDKEVHNVWATHACVPTDPNPQEIILENVTEEFDMWNNNMVEQMQLDIISLWDQSLKPCVKLTPLCVTLNCTEPNSTSTSSSNSTSSDWSEDIRNCSFNMTTELRDKRRTVYSLFYKLDLVSTDSNNSGQYRLITCNTSTITQACPKVSFEPIPIYYCTPAGFAIIKCRDPNFNGTGPCKNVSTVQCTHGIKPVVSTQLLLNGSLAEKEIMIRSKNITDNSKNIIVQLTEPVNITCVRPGNNTRTSIRIGPGQAYFRTGDVIGNIRKAYCEVNRTAWNSTLQKISTQLRKYFNDKTIIFKNSSGGDLEVTTHSFNCGGEFFYCNTTDLFDSTWDTNGTGTYNTQDNGTSIILQCRIKQFINMWQRVEQAMYAPPIAGNIKCESNITGLILTRDGGAGGTNSSNETFRPIGGDMRDNWRSELYKYKVVKIEPIGIAPTXARRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: MGAASLTLTVQARQLLSGIVQQQSNLLRAIEAQQHLLKLTVWGIKQLQARVLAVERYLKDQQLLGIWGCSGKLICTTNVPWNSSWSNKSQTEIWGNMTWMQWDKEIINYTNIIYELIEESQNQQEKNEKDLLALDKWTGLWSWFDISNWLWYIKIFIIIVGGLIGLRIVFAVLSIINRARQGYSPLSLQT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MTDGKDLEAEIHPLKSENRKVPENAGALAGKEPRGTPAPQTRLSHCRTAAFFLSLFACLLVVFVVSFIIPCPDRPALQGVWRIDYNAAVAYDFLAAEDVNKDKIQDILFLYKNTNSSRGNSSFSCADEGFSCPCTFVAAVSGASGSVLWERPVAQDRAFVECGILQPRGSAAPSACVVLGRPGSLVAVDTLTGKTLWSQPSSFGGNASVLSPLLRVPDLDADGAPDLLVLIQEENQVNGSIYSGGTGQQVSPPDSLGVDGTSGSILHVTRAGAHYVLIPCGTALCSRSVKGLYEKVSRRDSPLKSDPLWEDMLSAASHRLVVHSSGAIRYLMNVPGKAGDDLLLVSTEAYMLLDGQDLTPRWTFGTTQVLRKPVLGYYKPDTPAVLVENGTGPDRQVLLLDLGSGAVLWSQALPGLPGDPPSASLPTADHRSAFFFWGIHEPTDSNQTEPGAAGRRLYMLHPTLPGVLLELDNVSVPIVAFQVVLLEPGRHAACILLTGPASPSPPGLVSVTKHKVQDLVLAGRVVHLAEGGAESDQAVRDRLSRLRYRSEA

Annotated regions:
phrase: WRIDYNAAVAYDFLAAEDVNKDKIQDILFLYKNTNSSRGNSSFSCADEGFSCPCTFVAAVSGASGSVLWERPVAQDRAFVECGILQPRGSAAPSACVVLGRPGSLVAVDTLTGKTLWSQPSSFGGNASVLSPLLRVPDLDADGAPDLLVLIQEENQVNGSIYSGGTGQQVSPPDSLGVDGTSGSILHVTRAGAHYVLIPCGTALCSRSVKGLYEKVSRRDSPLKSDPLWEDMLSAASHRLVVHSSGAIRYLMNVPGKAGDDLLLVSTEAYMLLDGQDLTPRWTFGTTQVLRKPVLGYYKPDTPAVLVENGTGPDRQVLLLDLGSGAVLWSQALPGLPGDPPSASLPTADHRSAFFFWGIHEPTDSNQTEPGAAGRRLYMLHPTLPGVLLELDNVSVPIVAFQVVLLEPGRHAACILLTGPASPSPPGLVSVTKHKVQDLVLAGRVVHLAEGGAESDQAVRDRLSRLRY
type: DOMAIN
name: FAM234A_B_beta-prop
description: FAM234A/B, beta-propeller
Protein sequence:
MRPQPSPAVPSRCREAPVPRVRAQPVGIPEAQGPVPLHSQQMRLLWGPGRPFLALLLLVSIKQVTGSLLKETTQKWANYKEKCLEDLHNRLSGIFCNGTFDRYVCWPHSYPGNVSVPCPSYLPWWNAESPGRAYRHCLAQGTWQTRENTTDIWQDESECSENHSFRQNVDHYALLYTLQLMYTVGYSVSLISLFLALTLFLFLRKLHCTRNYIHMNLFASFILKVLAVLVKDMVSHNSYSKRPDDESGWMSYLSETSVSCRSVQVLLHYFVGTNHLWLLVEGLYLHTLLEPTVFPERRLWPKYLVVGWAFPMLFVIPWGFARAHLENTRCWATNGNLKIWWIIRGPMLLCVTVNFFIFLKILKLLISKLKAHQMCFRDYKYRLAKSTLLLIPLLGVHEVLFTFFPDDQVQGFSKRIRLFIQLTLSSVHGFLVALQYGFANGEVKAELRKSWGRFLLARHWGCRTCVLGKNFRFLGKCSKKLSEGDGSETLQKLRFSTCSSHLASETLGDVGVQPHRGRGAWPRGSSLSESSEGDFTLANTMEEILEESEI

Annotated regions:
phrase: LYTLQLMYTVGYSVSLISLFLALTLFLFLRKLHCTRNYIHMNLFASFILKVLAVLVKDMVSHNSYSKRPDDESGWMSYLSETSVSCRSVQVLLHYFVGTNHLWLLVEGLYLHTLLEPTVFPERRLWPKYLVVGWAFPMLFVIPWGFARAHLENTRCWATNGNLKIWWIIRGPMLLCVTVNFFIFLKILKLLISKLKAHQMCFRDYKYRLAKSTLLLIPLLGVHEVLFTFFPDDQVQGFSKRIRLFIQLTLSSVHGFLVALQYGFANGEVKAELRKSWG
type: DOMAIN
name: 7tmB1_GLP2R
description: GPCR family 2, glucagon-like peptide 2 receptor, 7TM

phrase: SGIFCNGTFDRYVCWPHSYPGNVSVPCPSYLPWWNAESPGRAYRHCLAQGTWQTRENTTDIWQDESECSENHSFRQ
type: DOMAIN
name: GPCR_2_extracellular_dom
description: GPCR, family 2, extracellular hormone receptor domain

phrase: CNGTFDRYVCWPHSYPGNVSVPC
type: CONSERVED_SITE
name: GPCR_2_secretin-like_CS
description: GPCR, family 2, secretin-like, conserved site

phrase: KCLEDLHNRLSGIFCNGTFDRYVCWPHSYPGNVSVPCPSYLPWWNAESPGRAYRHCLAQGTWQTRENTTDIWQDESECSEN
type: DOMAIN
name: GPCR_2_extracellular_dom
description: GPCR, family 2, extracellular hormone receptor domain

phrase: FCNGTFDRYVCWPHSYPGNVSVPCPSYLPWWNAESPGRAYRHCLAQGTWQTRENTTDIWQDESECSE
type: DOMAIN
name: GPCR_2_extracellular_dom
description: GPCR, family 2, extracellular hormone receptor domain

phrase: LQLMYTVGYSVSLISLFLALTLFLFLRKLHCTRNYIHMNLFASFILKVLAVLVKDMVSHNSYSKRPDDESGWMSYLSETSVSCRSVQVLLHYFVGTNHLWLLVEGLYLHTLLEPTVFPERRLWPKYLVVGWAFPMLFVIPWGFARAHLENTRCWATNGNLKIWWIIRGPMLLCVTVNFFIFLKILKLLISKLKAHQMCFRDYKYRLAKSTLLLIPLLGVHEVLFTFFPDDQVQGFSKRIRLFIQLTLSSVHGFLVALQYGFA
type: DOMAIN
name: GPCR_2-like_7TM
description: GPCR, family 2-like, 7TM
Protein sequence:
MAAALRGVRSGVICRVFPLSCSFQRSLNTGRGLLPRPRPLPLLLLTGGGYLGYQHYRKRGQEDGAPPPLATPTQVALYRSFPTRLLSRAWGRLNGVELPTWLRKPVYSLYIWTFGVNMQEAAVEDLHHYRNLGEFFRRRLKPAVRPICASSCLISPADGRILHFGRVKNSEVEQVKGVTYSLENFLGPQKRRGSDSSSSFRDLLLSSPDNDLFHAVVYLAPGDYHCFHSPTDWRVELRRHFPGSLMSVNPGVARWVKELFCLNERVVLTGQWQHGFFSLTAVGATNVGSIRVYFDQELQTNAPHYSKGSFHDRNYVAADDQVLRVAGEGGAVPVDGEGVALHRGEAVGEFNLGSTIVLLFEAPKDFNFHLQPGQRIRVGEGLGSF

Annotated regions:
Protein sequence:
MVGKLKNAKNKGRTRLRRPPKGKAMGMGLILGIMNYASHIALGMKVNSRLKSFWKMTPPGKLAKGITTLMNILRTLLNGILGRKKQRRGGTESLFPIMFLTGLMAMQVSQNGDGWLLSPDQMDIGKTYKVGTGLCIFSSLDIGVPCNLTITYACVTLANTEEPVDLDCFCRDVQNVWVKYPLCKPGGHRLKRSLSITEHPSSVSLDKPTLWHHWNSVNDRIGKSEEWIVTNAWKSLVIAIVVIMVFGISYQSMIVICIAALIAPSYSTQCVNIQKRDIIRGASDVSWFDVLLEKGACVTISAQDKPSVDLWLDDVIQESLIEGRHYCTKASISDLKADARCPTQGEATMREEHLDGYVCKRSFSDRGWGNGCGLFGKGSIVGCAKATCGANDIIKSYSYDSPKVKYVIGAEVHQGKLLTNNSTDRIVKTTFTAESEKHTITIADYGSMDFTCRVVASVELSNIRMIELDGHMFNVHEDWLSDLPLPSKISGGSWHGMDRLVVFKEPHAVKMEIQECGDQRPAVFKSLVKAEEVTKTSNSYHLTGGHVDCRVSTLNLRMKGLTYQMCSSSFVWHKRPVATQHGTVAMEVKYKGSDAPCRIPVSVEKEGYNGKNFGNLITANPFAANNEAVVFLELEAPLGVSTIKVGGAVFQWKQEGSSIGKAVTLMKRNIEKTLITSSAYWSSSEPFTSAGIMRILRMPFDMIFGGVGFLGKLMISGVLIWLCVNVQNSTLSVVSGVIGFMLLGFTTGVMGDHGCALDTYRKEMRCGD

Annotated regions:
phrase: LLSPDQMDIGKTYKVGTGLCIFSSLDIGVPCNLTITYACVTLANTEEPVDLDCFCRDVQNVWVKYPLCKPGGH
type: DOMAIN
name: Flavi_propep
description: Flavivirus polyprotein propeptide

phrase: QCVNIQKRDIIRGASDVSWFDVLLEKGACVTISAQDKPSVDLWLDDVIQESLIEGRHYCTKASISDLKADARCPTQGEATMREEHLDGYVCKRSFSDRGWGNGCGLFGKGSIVGCAKATCGANDIIKSYSYDSPKVKYVIGAEVHQGKLLTNNSTDRIVKTTFTAESEKHTITIADYGSMDFTCRVVASVELSNIRMIELDGHMFNVHEDWLSDLPLPSKISGGSWHGMDRLVVFKEPHAVKMEIQECGDQRPAVFKSLVKAEEVTKTSNSYHLTGGHVDCRVSTLNLRMK
type: DOMAIN
name: Flavi_Glycoprot_E_cen/dimer
description: Envelope glycoprotein E, central and dimerisation domain, flavivirus

phrase: GKAVTLMKRNIEKTLITSSAYWSSSEPFTSAGIMRILRMPFDMIFGGVGFLGKLMISGVLIWLCVNVQNSTLSVVSGVIGFMLLGFTTGVM
type: DOMAIN
name: Flavi_E_Stem/Anchor_dom
description: Flavivirus envelope glycoprotein E, Stem/Anchor domain

phrase: SFVWHKRPVATQHGTVAMEVKYKGSDAPCRIPVSVEKEGYNGKNFGNLITANPFAANNEAVVFLELEAPLGVSTIKVGGAVFQWKQ
type: DOMAIN
name: Flavi_E_Ig-like
description: Glycoprotein E, immunoglobulin-like domain, flavivirus

phrase: YQMCSSSFVWHKRPVATQHGTVAMEVKYKGSDAPCRIPVSVEKEGYNGKNFGNLITANPFAANNEAVVFLELEAPLGVSTIKVG
type: DOMAIN
name: Flavi_E_Ig-like
description: Glycoprotein E, immunoglobulin-like domain, flavivirus
Protein sequence:
MTQETALLPTSPEAGDLNVPARKVFVKTYGCQMNVYDSDRMSDALSRDGYVATDVLEEADFVLLNTCHIREKAAEKVYSELGRLRDLKKAKAREGREMLIGVAGCVAQAEGKEILRRAPAVDLVIGPQTYHRLPEALRRARTGERIVETDYAIEDKFVHLPAPDKAKTRARGVTAFLTVQEGCDKFCTFCVVPYTRGSEVSRPVAQIVAEAEKLVEGGVREITLLGQNVNAWHGAGPHGREWGLGDLLRRLGEIEGLARLRYTTSHPRDMDDSLIEAHRSMAKLMPYLHLPVQSGSDRILKAMNRRHTAAEYLALVARIRAVQPDLALSGDFIVGFPGETDEDFEDTLRLVDAVNYAQAFSFKYSTRPGTPGAELEQQVPEDVKAKRLEILQALLIKQQRGFAEACVGREIDLLLEKPGRMPGQLVGRSPWLQPVNVDAKASQIGDIIRVRITKAGPNSLFAEMIGETEARS

Annotated regions:
phrase: RKVFVKTYGCQMNVYDSDRMSDALSRDGYVATDVLEEADFVLLNTCHIREKAAEKVYSELGRLRDLKKAKAREGREMLIGVAGCVAQAEGKEILRRAPAVDLVIGPQTYHRLPEALRRAR
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: VTAFLTVQEGCDKFCTFCVVPYTRGSEVSRPVAQIVAEAEKLVEGGVREITLLGQNVNAWHGAGPHGREWGLGDLLRRLGEIEGLARLRYTTSHPRDMDDSLIEAHRSMAKLMPYLHLPVQSGSDRILKAMNRRHTAAEYLALVARIRAVQPDLALSGDFIVGFPGETDEDFEDTLRLVDAVNYAQAFSFKYSTRPGTPGAELEQQVPEDVKAKRLEILQ
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: ACVGREIDLLLEKPGRMPGQLVGRSPWLQPVNVDAKASQIGDIIRVRITKAGPNSLFAEM
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: KVFVKTYGCQMNVYDSDRMSDALSRDGYVATDVLEEADFVLLNTCHIREKAAEKVYSELGRLRDLKKAKAREGREMLIGVAGCVAQAEGKEILRRAPAVDLVI
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: RARGVTAFLTVQEGCDKFCTFCVVPYTRGSEVSRPVAQIVAEAEKLVEGGVREITLLGQNVNAWHGAGPHGREWGLGDLLRRLGEIEGLARLRYTTSHPRDMDDSLIEAHRSMAKLMPYLHLPVQSGSDRILKAMNRRHTAAEYLALVARIRAVQPDLALSGDFIVGFPGETDEDFEDTLRLVDAVNYAQAFSFKYSTRPGTPGAELEQQVPEDVKAKRLEILQALLIKQQRGF
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VQEGCDKFCTFCVVPYTRGSEVSRPVAQIVAEAEKLVEGGVREITLLGQNVNAWHGAGPHGREWGLGDLLRRLGEIEGLARLRYTTSHPRDMDDSLIEAHRSMAKLMPYLHLPVQSGSDRILKAMNRRHTAAEYLALVARIRAVQPDLALSGDFIVGFPGETDEDFEDTLRL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: EACVGREIDLLLEKPGRMPGQLVGRSPWLQPVNVDAKASQIGDIIRVRITKAGPNSLFAEMI
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: LTVQEGCDKFCTFCVVPYTR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site
Protein sequence:
MTLWINGDWITGQGERRRKTNPVSAEILWQGNDANAAQVAEACQAAREAFPRWARQPFAARQAIVEKFAALLEAHKADLTEVIARETGKPRWEAATEVTAMINKIAISIKAYHARTGEQKSELVDGAATLRHRPHGVLAVFGPYNFPGHLPNGHIVPALLAGNTLIFKPSELTPWTGETVIKLWERAGLPAGVLNLVQGGREIGQALSSLDDLDGLLFTGSASTGYQLHRQLSGQPEKILALEMGGNNPLIIEDATNMDAAVHLTLQSAFITAGQRCTCARRLLVKQGAQGDAFLARLVDVAGRLQPGRWDDDPQPFIGGLISAQAAQHVMEAWRQREALGGRTLLAPRKVKEGTSLLTPGIIELTGVADVPDEEVFGPLLNVWRYAHFDEAIRLANNTRFGLSCGLVSTDRAQFEQLLLEARAGIVNWNKPLTGAASTAPFGGVGASGNHRPSAWYAADYCAWPMASLESPELTLPATLSPGLDFSRREAV

Annotated regions:
phrase: FITAGQRCTCA
type: CONSERVED_SITE
name: Ald_DH_CS_CYS
description: Aldehyde dehydrogenase, cysteine active site

phrase: LEMGGNN
type: CONSERVED_SITE
name: Ald_DH_CS_GLU
description: Aldehyde dehydrogenase, glutamic acid active site

phrase: WITGQGERRRKTNPVSAEILWQGNDANAAQVAEACQAAREAFPRWARQPFAARQAIVEKFAALLEAHKADLTEVIARETGKPRWEAATEVTAMINKIAISIKAYHARTGEQKSELVDGAATLRHRPHGVLAVFGPYNFPGHLPNGHIVPALLAGNTLIFKPSELTPWTGETVIKLWERAGLPAGVLNLVQGGREIGQALSSLDDLDGLLFTGSASTGYQLHRQLSGQPEKILALEMGGNNPLIIEDATNMDAAVHLTLQSAFITAGQRCTCARRLLVKQGAQGDAFLARLVDVAGRLQPGRWDDDPQPFIGGLISAQAAQHVMEAWRQREALGGRTLLAPRKVKEGTSLLTPGIIELTGVADVPDEEVFGPLLNVWRYAHFDEAIRLANNTRFGLSCGLVSTDRAQFEQLLLEARAGIVNWNKPLTGAASTAPFGGVGASGNHRPSAWY
type: DOMAIN
name: Aldehyde_DH_dom
description: Aldehyde dehydrogenase domain
Protein sequence:
MKAPLAFPRGNVHKAATGRRPALSLHSPVTKPAIKALSLDELTQLFAAQGESAYRAKQVTDWLYKKRIDSFAAMTDLPAATRARLASDFSFVRPELVRVLGATDTTRKFLFRLADGNLIESVLIPASPALYGQTSDRRTACVSTQVGCAYGCKFCASGLDGFTRNLEASEIVDQLLAIEKESGEKIDNIVFMGMGEPLANLTNLLRAIRIINAPWGLEIGARHITISTSGLAPQIRKLATEPTQFRLAISLHGATDDVRSQIMPVNRKYPLAVLLEACDAYVAEKKRLMFEYILIAGVNDSDEQAQQLARHALRLSAKINLIPYNTVEGLEWSRPSRNRQENFLRILRNHGAVATLRREKGHDIAAACGQLRLQTKRTEEKVAAVP

Annotated regions:
phrase: LSLDELTQLFAAQGESAYRAKQVTDWLYKKRIDSFAAMTDLPAATRARLA
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: STQVGCAYGCKFCASGLDGFTRNLEASEIVDQLLAIEKESGEKIDNIVFMGMGEPLANLTNLLRAIRIINAPWGLEIGARHITISTSGLAPQIRKLATEPTQFRLAISLHGATDDVRSQIMPVNRKYPLAVLLEACDAYVAEKKRLMFEYILIAGVNDSDEQ
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: RTACVSTQVGCAYGCKFCASGLDGFTRNLEASEIVDQLLAIEKESGEKIDNIVFMGMGEPLANLTNLLRAIRIINAPWGLEIGARHITISTSGLAPQIRKLATEPTQFRLAISLHGATDDVRSQIMPVNRKYPLAVLLEACDAYVAEKKRLMFEYILIAGVNDSDEQAQQLARHALRLSAKINLIPYNTVEGLEWSRPSRNRQENFLRILR
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: TSDRRTACVSTQVGCAYGCKFCASGLDGFTRNLEASEIVDQLLAIEKESGEKIDNIVFMGMGEPLANLTNLLRAIRIINAPWGLEIGARHITISTSGLAPQIRKLATEPTQFRLAISLHGATDDVRSQIMPVNRKYPLAVLLEACDAYVAEKKRLMFEYILIAGVNDSDEQAQQLARHALRLSAKINLIPYNTVEGLEWSRPSRNRQENFLRILRNHGAVATLRREKGH
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TKPAIKALSLDELTQLFAAQGESAYRAKQVTDWLYKKRIDSFAAMTDLPAATRARLASDFSFVRPELVRVLGATDTTRKFLFRLADGNLIESVLIPASPALYGQTSDRRTACVSTQVGCAYGCKFCASGLDGFTRNLEASEIVDQLLAIEKESGEKIDNIVFMGMGEPLANLTNLLRAIRIINAPWGLEIGARHITISTSGLAPQIRKLATEPTQFRLAISLHGATDDVRSQIMPVNRKYPLAVLLEACDAYVAEKKRLMFEYILIAGVNDSDEQAQQLARHALRLSAKINLIPYNTVEGLEWSRPSRNRQENFLRILRNHGAVATLRREKGHDIAAACGQLRLQTKRTEE
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MDRYQALFAQLEKKNQGAFVPFVTIGDPNPELSYNIMETLIEAGADALELGIPFSDPLADGPTIQGANIRALDSKTTPAICFELIAKIRSKYPETPIGLLVYANLVFANGIDDFYAKCQQAGVDSVLIADVPTNESQEFRESAIEHGIHPIFIAPPSASPETLETVAKLGGGYTYLLSRAGVTGAETKAGMPVAQLLERLNQYDAPPAILGFGISEPAQVEEAVKAGAAGAISGSATVKLIEQHQANPEALLKALTDFTSSMKAATQK

Annotated regions:
phrase: LELGIPFSDPLAD
type: ACTIVE_SITE
name: Trp_synthase_alpha_AS
description: Tryptophan synthase, alpha chain, active site