nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MVDVNKFESMRIGIASPQKIRYWSFGEVKKPETINYRTQKPEREGLFDERIFGPQKDWECACGKLKGVFYKNQVCELCGVQVTTAKSRRERMGHIELAAPISHIWYFKGIPSRMGLALDMSPRALEEVIYFASYVVIDPKETDLEKKQLLTEREYREQLLKNGFGSFVAKMGAEAIQDLLNDVDIDKEVAELKEELKTVTGQRRVKIIRRLDVLSAFRKSGNALSWMVLNVLPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLMELNAPNIIVQNEKRMLQEAVDTLIDNGRRGRPITGAGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIAVGPTLKMYQCGVPREMAIELFKPFVMAQLVKKELAANIRAAKRKVERQDSDVWDVLETVVKEHPVLLNRAPTLHRLGIQAFEPVLIDGKAIRLHPLACEAYNADFDGDQMAIHLPLSEEAQAEARLLMLAAEHILNPKDGKPVVTPSQDMVLGNYYLTMEEKGREGEGMIFATPEEVEIAMRNGYVHLHTRIGIATKSLNKPWTENQQDKILVTTVGKVIFNSIIPEGMPYLNEPTDVNLTTSTDDRFFMDAGQNIKEVLAGIDTVRPFKKGYLGNIIAEVFKRYRTTATSEYLDRLKDLGYYQSTLAGLTVGIADIPVVEDKHEIIDAAHKRVEQITKQFRRGLITDDERYNAVTGVWRDAKESLEKRLIEEQDLTNPIVMMMDSGARGNISNFSQLAGMRGLMAAPNGKIMELPIISNFREGLSVLEMFFSTHGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLVIADIATGKEMVEPLFERLVGRYTRKSVLHPETGEMIIGDDTLISEDIARKIIEAGVKEVTIRSVFTCKTPHGVCKHCYGINLATGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASSSDITQGLPRVQEIFEARNPKGEAIITEVTGTVESIVEDGATRTREITVKGKTDTRSYTVGMADVLMVEEGEFIHRGAPLIQGSIEPKHLLQVRDALSVETYLLGEVQKTYRSQGVEIGDKHIEVMVRQMLRKVRIMDNGSIDVLPGTLMDISDFEALNETALLNGEMPATGRPVLMGITKASLETNSFLSAASFQETTRVLTDAAIRGKEDHLLGLKENVIIGKIIPAGTGMFRYRNIEPLADLTNAPEVKEVETETVEN

Annotated regions:
phrase: GLSVLEMFFSTHGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLVIADIATGKEMVEPLFERLVGRYTRKSVLHPETGEMIIGDDTLISEDIARKIIEAGVKEVTIRSVFTCKTPHGVCKHCYGINLATGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASSSDITQGLPRVQEIFEARNPKGEAIITEVTGTVESIVEDGATRTREITVKGKTDTRSYTVGMADVLMVEEGEFIHRGAPLIQGSIEPKHLLQVRDALSVETYLLGEVQKTYRSQGVEIGDKHIEVMVRQMLRKVRIMDNGSIDVLPGTLMDISDFEALNETALLNGEMPATGRPVLMGITKAS
type: DOMAIN
name: RNA_pol_Rpb1_5
description: RNA polymerase Rpb1, domain 5

phrase: ITDDERYNAVTGVWRDAKESLEKRLIEEQDLTNPIVMMMDSGARGNISNFSQLAGMRGLMAAPNGKIMELPIISNF
type: DOMAIN
name: RNA_pol_Rpb1_4
description: RNA polymerase Rpb1, domain 4

phrase: NKFESMRIGIASPQKIRYWSFGEVKKPETINYRTQKPEREGLFDERIFGPQKDWECACGKLKGVFYKNQVCELCGVQVTTAKSRRERMGHIELAAPISHIWYFKGIPSRMGLALDMSPRALEEVIYFASYVVIDPKETDLEKKQLLTEREYREQLLKNGFGSFVAKMGAEAIQDLLNDVDIDKEVAELKEELKTVTGQRRVKIIRRLDVLSAFRKSGNALSWMVLNVLPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLMELNAPNIIVQNEKRMLQEAVDTLIDNGRRGRPITGAGNRPLKSLSHMLKGKQGRFRQN
type: DOMAIN
name: RNA_pol_Rpb1_1
description: RNA polymerase Rpb1, domain 1

phrase: GKRVDYSGRSVIAVGPTLKMYQCGVPREMAIELFKPFVMAQLVKKELAANIRAAKRKVERQDSDVWDVLETVVKEHPVLLNRAPTLHRLGIQAFEPVLIDGKAIRLHPLACEAYNADFDGDQMAIHLPLSEEAQAEARLLM
type: DOMAIN
name: RNA_pol_asu
description: RNA polymerase, alpha subunit

phrase: HILNPKDGKPVVTPSQDMVLGNYYLTMEEKGREGEGMIFATPEEVEIAMRNGYVHLHTRIGIATKSLNKPWTENQQDKILVTTVGKVIFNSIIPEGMPYLNEPTDVNLTTSTDDRFFMDAGQNIKEVLAGIDTVRPFKKGYLGNIIAEVFKRYRTTATSEYLDRLKDLGYYQSTLAGLTVGIAD
type: DOMAIN
name: RNA_pol_Rpb1_3
description: RNA polymerase Rpb1, domain 3

phrase: SWMVLNVLPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLMELNAPNIIVQNEKRMLQEAVDTLIDNGRRGRPITGAGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIAVGPTLKMYQCGVPREMAIELFKPFVMAQLVKKELAANIRAAKRKVERQDSDVWDVLETVVKEHPVLLNRAPTLHRLGIQAFEPVLIDGKAIRLHPLACEAYNADFDGDQMAIHLPLSEEAQAEARLLMLAAEHILNPKDGKPVVTPSQDMVLGNYYL
type: DOMAIN
name: RNA_pol_N
description: RNA polymerase, N-terminal
Protein sequence:
MPHLPLASFRPPFWGLRHSRGLPRFHSVSTQSEPHGSPISRRNREAKQKRLREKQATLEAEIAGESKSPAESIKAWRPKELVLYEIPTKPGEKKDVSGPLPPAYSPRYVEAAWYPWWVREGFFKPEYQARLPQATGETFSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRGDQVLWVPGSDHAGIATQAVVEKQLWKERGVRRHELSREAFLREVWQWKEAKGGEICEQLRALGASLDWDRECFTMDVGSSVAVTEAFVRLYKAGLLYRNHQLVNWSCALRSAISDIEVENRPLPGHTQLRLPGCPTPVSFGLLFSVAFPVDGEPDAEVVVGTTRPETLPGDVAVAVHPDDSRYTHLHGRQLRHPLMGQPLPLITDYAVQPHVGTGAVKVTPAHSPADAEMGARHGLSPLNVIAEDGTMTSLCGDWLQGLHRFVAREKIMSVLSEWGLFRGLQNHPMVLPICSRSGDVIEYLLKNQWFVRCQEMGARAAKAVESGALELSPSFHQKNWQHWFSHIGDWCVSRQLWWGHQIPAYLVVEDHAQGEEDCWVVGRSEAEAREVAAELTGRPGAELTLERDPDVLDTWFSSALFPFSALGWPQETPDLARFYPLSLLETGSDLLLFWVGRMVMLGTQLTGQLPFSKVLLHPMVRDRQGRKMSKSLGNVLDPRDIISGVEMQVLQEKLRSGNLDPAELAIVAAAQKKDFPHGIPECGTDALRFTLCSHGVQAGDLHLSVSEVQSCRHFCNKIWNALRFILNALGEKFVPQPAEELSPSSPMDAWILSRLALAAQECERGFLTRELSLVTHALHHFWLHNLCDVYLEAVKPVLWHSPRPLGPPQVLFSCADLGLRLLAPLMPFLAEELWQRLPPRPGCPPAPSISVAPYPSACSLEHWRQPELERRFSRVQEVVQVLRALRATYQLTKARPRVLLQSSEPGDQGLFEAFLEPLGTLGYCGAVGLLPPGAAAPSGWAQAPLSDTAQVYMELQGLVDPQIQLPLLAARRYKLQKQLDSLTARTPSEGEAGTQRQQKLSSLQLELSKLDKAASHLRQLMDEPPAPGSPEL

Annotated regions:
phrase: LSVSEVQSCRHFCNKIWNALRFILNALGEKFVPQPAEELSPSSPMDAWILSRLALAAQECERGFLTRELSLVTHALHHFWLHNLCDVYLEAVKPVLWHSPRPLGPPQVLFSCADLGLRLLAPLMPFLAEELWQR
type: DOMAIN
name: Anticodon_Ia_Val
description: Valyl tRNA synthetase, anticodon-binding domain

phrase: WYPWWVREGFFKPEYQARLPQATGETFSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMRGDQVLWVPGSDHAGIATQAVVEKQLWKERGVRRHELSREAFLREVWQWKEAKGGEICEQLRALGASLDWDRECFTMDVGSSVAVTEAFVRLYKAGLLYRNHQLVNWSCALRSAISDIEVENRPLPGHTQLRLPGCPTPVSFGLLFSVAFPVDGEPDAEVVVGTTRPETLPGDVAVAVHPDDSRYTHLHGRQLRHPLMGQPLPLITDYAVQPHVGTGAVKVTPAHSPADAEMGARHGLSPLNVIAEDGTMTSLCGDWLQGLHRFVAREKIMSVLSEWGLFRGLQNHPMVLPICSRSGDVIEYLLKNQWFVRCQEMGARAAKAVESGALELSPSFHQKNWQHWFSHIGDWCVSRQLWWGHQIPAYLVVEDHAQGEEDCWVVGRSEAEAREVAAELTGRPGAELTLERDPDVLDTWFSSALFPFSALGWPQETPDLARFYPLSLLETGSDLLLFWVGRMVMLGTQLTGQLPFSKVLLHPMVRDRQGRKMSKSLGNVLDPRDIISGVEMQVLQEKLRSGNLDPAELAIVAAAQKKDFPHGIPECGTDALRFTLCSHGVQA
type: DOMAIN
name: aa-tRNA-synth_Ia
description: Aminoacyl-tRNA synthetase, class Ia

phrase: PNVTGSLHIGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: DAWILSRLALAAQECERGFLTRELSLVTHALHHFWLHNLCDVYLEAVKPVLWHSPRPLGPPQVLFSCADLGLRLLAPLMPFLAEELWQRLPPRPGCPPAPSISVAPYPSACSLEHWRQPELERRFSRVQEVVQVLRALRATYQLTKAR
type: DOMAIN
name: M/V/L/I-tRNA-synth_anticd-bd
description: Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding
Protein sequence:
MVTIRLARGGAKKRPFYHLTVSDSRKSRDGRFIERIGFFNPVARGQEERLRVDLERAAHWQELGAQVSDRVAELLKEARKQQA

Annotated regions:
phrase: VTIRLARGG
type: CONSERVED_SITE
name: Ribosomal_bS16_CS
description: Small ribosomal subunit protein bS16, conserved site
Protein sequence:
MITDPIADCLTRIRNGYLSNILIIEIPYSKIKKNIIKILYNQGFISSYKIEKINNYKLLIKVALKYNKYTGTSVIKCIKRISKPSLRKYCNYTNIPRVLNGLGIAIISTSKGLMTDKIARKKKIGGEIICYIY

Annotated regions:
phrase: GIAIISTSKGLMTDKIA
type: CONSERVED_SITE
name: Ribosomal_uS8_CS
description: Small ribosomal subunit protein uS8, conserved site
Protein sequence:
MQYTKISHMNPAERVEALTASLVSLSSVNGTVGEGTKADFIKEVITSYPYFQENPSHVWEQAIPNDPYKRKNIFAFIKGHGESRNTVIYHAHLDTVGIEDFGPLKDIAFDCEKLAEYFSRYEFDQDVQRDAKSGEWMFGRGSVDMQSGIAVHLANLLHFSENLETLPGNVLFMANPDEESQHSGILASISELNRLKKEKQLHYLAAINTDFITPLYDGDQTRYIYTGAAGKLLPCFYIYGREVHVGDTLAGIDPNFISSEITSRLHNNIHLAEKVEGELVLPPSCLYQRDNKESYNVQTAVSTSLYFNCFIYERTAKEMMDLLIEVTEEACRETEQKLSDYYEEYVKRANLPKKHLSWGIQVYSLEQYLEKLRNRGIDPEQCIEQTFKANEHLELRMRCFQAIEELQKLDPDQGAKVILFYAPPYLPHNYLKEDSARDQLLQHVIKEAADKTAESTGETFVFKKFFPYLADGSFLSLHETDGEIDSFIRNFPGWNMIGTIPFKDIRKLNIPSINMGVYGKDGHKWTERVYKPYTFHVLPLLIQQTTVHLLQSYRMTITAKEPKGEG

Annotated regions:
Protein sequence:
MLLFWMWWALLAVFRAFPGIDIYFSQLFFVGADCDATAAAGNICGGFPYRDVAAFDLLRTVFFRLPYVVAIVMVWKLVECYQQHGATFNAERAQKLKVALGTLLIGPVLLVNVVLKEHWGRPRPIQTDIFGGALHFAEAGSLAGKCVSNCSFVSGEAASAGWLFCLLLFVPKSLRYAVAAPLAAISILTPAMRLSFGAHYLSDVVLGWLSSLVVFAALLALTESQQHQKNSEI

Annotated regions:
phrase: LIGPVLLVNVVLKEHWGRPRPIQTDIFGGALHFAEAGSLAGKCVSNCSFVSGEAASAGWLFCLLLFVPKSLRYAVAAPLAAISILTPAMRLSFGAHYLSDVVLGWLSSLVVFAALLA
type: DOMAIN
name: P_Acid_Pase_2/haloperoxidase
description: Phosphatidic acid phosphatase type 2/haloperoxidase

phrase: QKLKVALGTLLIGPVLLVNVVLKEHWGRPRPIQTDIFGGALHFAEAGSLAGKCVSNCSFVSGEAASAGWLFCLLLFVPKSLRYAVAAPLAAISILTPAMRLSFGAHYLSDVVLGWLSSLVVFAAL
type: DOMAIN
name: P_Acid_Pase_2/haloperoxidase
description: Phosphatidic acid phosphatase type 2/haloperoxidase
Protein sequence:
MHIKPEEITSIIKNEIKNYEKELETVDSGTIIQIGDGVARVYGLEECMEGELLEFPNQVFGMALNLEQDNVGCVLLGSEEGIKEGDIVKRTGKIVEVPVGEDLIGRVVNSLGQPIDGKGPIKNDGYRAIEVPAPGILERSSVNEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGKTAIAIDTIINQKGKDVICIYVAIGQKQSTVANIVNTLTEEGAMDYSIVVTASASESAPLQYIAPYSGCTMGEYFMNKGKHVLIIYDDLSKHAVAYRTMSLLIRRPPGREAYPGDVFYIHSRLLERAAKLSKENGGGSLTALPIIETLAGDVTAYIPTNVISITDGQIFLETELFNAGQRPAVNPGISVSRVGGNAQIKAMKQVSGTLRLELAQYRELASFAQFGSDLDKDTQARLEKGKRLIEILKQDQYKPMAVEKQIMIIYAAVNNFLLDIKVSDIKRFEKEFLEYMDTHHREIGKAILDKKVLDDELKSALESAIVEFKKIFLM

Annotated regions:
phrase: QIKAMKQVSGTLRLELAQYRELASFAQFGSDLDKDTQARLEKGKRLIEILKQDQYKPMAVEKQIMIIYAAVNNFLLDIKVSDIKRFEKEFLEYMDTHHREIGKAILDKKVLDDELKSALESAIVE
type: DOMAIN
name: ATP_synth_asu_C
description: ATP synthase, alpha subunit, C-terminal

phrase: PAVNPGISV
type: ACTIVE_SITE
name: ATPase_a/bsu_AS
description: ATPase, alpha/beta subunit, nucleotide-binding domain, active site

phrase: GIKAIDSMIPIGRGQRELIIGDRQTGKTAIAIDTIINQKGKDVICIYVAIGQKQSTVANIVNTLTEEGAMDYSIVVTASASESAPLQYIAPYSGCTMGEYFMNKGKHVLIIYDDLSKHAVAYRTMSLLIRRPPGREAYPGDVFYIHSRLLERAAKLSKENGGGSLTALPIIETLAGDVTAYIPTNVISITDGQIFLETELFNAGQRPAVNPGISV
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_nucl-bd
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain

phrase: MKQVSGTLRLELAQYRELASFAQFGSDLDKDTQARLEKGKRLIEILKQDQYKPMAVEKQIMIIYAAVNNFLLDIKVSDIKRFEKEFLEYMDTHHREIGKAILDKKVLDDELKSALESAIVEFKKI
type: DOMAIN
name: ATP_synth_asu_C
description: ATP synthase, alpha subunit, C-terminal

phrase: IVEVPVGEDLIGRVVNSLGQPIDGKGPIKNDGYRAIEVPAPGILERSSVNEPLQTGIKAIDSMIPIGRGQRELIIGDRQTGKTAIAIDTIINQKGKDVICIYVAIGQKQSTVANIVNTLTEEGAMDYSIVVTASASESAPLQYIAPYSGCTMGEYFMNKGKHVLIIYDDLSKHAVAYRTMSLLIRRPPGREAYPGDVFYIHSRLLERAAKLSKENGGGSLTALPIIETLAGDVTAYIPTNVISITDGQIFLETELFNAGQRPAVNPGISVSRV
type: DOMAIN
name: ATP_synth_F1_a_nt-bd_dom
description: ATP synthase, F1 complex, alpha subunit nucleotide-binding domain

phrase: DSGTIIQIGDGVARVYGLEECMEGELLEFPNQVFGMALNLEQDNVGCVLLGSEEGIKEGDIVKRT
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_N
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain
Protein sequence:
MRDFMDYIQLAFYDASKWNRDNSYSQLTTTANALLDFSTPERLKVNLSSLSTPHFATTYTLGTVGLIDGSISYLFTTIPLHDTPSRSTLIPLRKLVPGYRQIYPPSLPPAFPAADGRDGDLAIGGTEGDLKKKATLLHATLHLPPPTTLTGSFLRRLSPTTQLSLAFCSSRAPASKSAPQATLVTQILYDTGKYNSEFLFSTDNALFGFKGLWNFGPDPRKQNQNGGDPAREPCRSLLSLLSAGGEVYYSPVSSVVGLSTGLRFTTLPAATENPHSTFPYTLTLTLTPLTGSMSTTYSLLASPNLAFSSRFGFNVYSWESEMVAGCELWRRSKKLHTLQRNSSPLFAVDDLTWARRKMGLQDAAVSVHSERDDLPGIQRYDHDMHHHTQRPHASDSVIKVRVDQSWNIRALWEGRVKELVVSAGIALGPKSRSSLSYASSLAASGPGAAGGLSSYGWKSVGVSVLYSS

Annotated regions:
Protein sequence:
MDSPWDELALAFSRTSMFPFFDIAHYLVSVMAVKRQPGAAALAWKNPISSWFTAMLHCFGGGILSCLLLAEPPLKFLANHTNILLASSIWYITFFCPHDLVSQGYSYLPVQLLASGMKEVTRTWKIVGGVTHANSYYKNGWIVMIAIGWARGAGGTIITNFERLVKGDWKPEGDEWLKMSYPAKVTLLGSVIFTFQHTQHLAISKHNLMFLYTIFIVATKITMMTTQTSTMTFAPFEDTLSWMLFGWQQPFSSCEKKSEAKSPSNGVGSLASKPVDVASDNVKKKHTKKNE

Annotated regions:
Protein sequence:
MNFRLLSQYHADIKKLIKISLPILLAQIAQNSMGLADTIMAGRVSSTDMAAISIGASIWMPLMFFGQGLLLALPPTISYLNGSGQHHRIAHQVRQGIWLVLGVSIPLGLLIYFCEIPLQYMQMESKMSDLARDYLHAMLWGLPAYLMLINFRCLNDGIEKTKPAMVITFLGLLINIPLNYIFIYGKFGMPAFGAVGCGIATAIVNWAMCLMMIFYSYTNTQERSLKVFSQLIEMPNPKTLKKLLRLGLPIAIAICCEVALYALTSLMLSPLGATIVASHQITLNTSSFIFMFPMSIGMATTILVGQALGAGSPQNAKKIGYAALLLGLTVTIVTALITIFFRYEIASIFVTDEIVIAMAANLLLFAALYQFSDTIQMVVGGILRGYKDTKVILYITLFSYWVIGVPLGYTLGRTDWLVPHIDAKGFWIAFVVSLTFAAFLLSLRMKKMQAMNDNAILQRLEKLK

Annotated regions:
Protein sequence:
MIKEFREFISRGNVIDLAVGVIVGAAFTAIINSLVNDIINPLIGLLVGGRADFSNYFIPLAGQTATTLAEAQAAGPVLAYGSFLTAVINFLLIAFVVFMIVRTVNRMRSKPEAVPPAPPEPTPSERLLAEIRDLLARQG

Annotated regions:
phrase: RGNVIDLAVGVIV
type: CONSERVED_SITE
name: Mechanosensitive_channel_CS
description: Large-conductance mechanosensitive channel, conserved site
Protein sequence:
MRVRETQMNWPNLWKWGTLILGLVIICSASDNLWVTVYYGVPVWRDADTTLFCASDAKAHEREVHNVWATYACVPTDPNPQEIHMENVTENFNMWKNNMAEQMQEDVISLWDESLKPCVKLTPLCVTLICSSNITTQANNITNVTYIGNLENITEEVRNCSFNVTTEIRDKKQKIRALFYKLDLVQMGENGSSEYRLINCNTSVIKQACPKVTFDPIPIHYCTPAGFAILKCNDKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEEEIIIRSENLTNNAKTIIVHLNKSVEINCTRPSNNTRTGVTIGPGQVFYRTGDIIGDIRQAYCEINGKNWNEVLIQVVGKLKEHFNNNTIKFQPPSGGDLEITMHHFNCRGEFFYCNTTRLFNNTCIENGTMENGTMVEGCNETIILPCRIKQIINMWQGAGQAMYAPPISGTINCVSNITRILLTRDGGANNGTDETFRPGGGNIKDNWRNELYKYKVVQIEPLGIAPTRARRGVVEREKRAVGIGAMIFGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQKFLGLWGCSGKIICTTNVPWNSSWSNRSYEEIWDNMTWIEWEREISNYTSQIYEIPTESQNQQDRNEKDLLELDKWASQRNWFDITNWLWYIKIFIMIVGSLIGLRIIFAVFSIVNRVRQGYSPLSFQTHTHHQREPDRPEGIEEDGGEQGRDRSVRLVTGFLALAWDDLRSLCLF

Annotated regions:
phrase: VQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQKFLGLWGCSGKIICTTNVPWNSSWSNRSYEEIWDNMTWIEWEREISNYTSQIYEIPTESQNQQDRNEKDLLELD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQKFLGLWGCSGKIICTTNVPWNSSWSNRSYEEIWDNMTWIEWEREISNYTSQIYEIPTESQNQQDRNEKDLLELDKWASQRNWFDITNWLWYIKIFIMIVGSLIGLRIIFAVFSIVNRVRQGYSPLSFQT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWRDADTTLFCASDAKAHEREVHNVWATYACVPTDPNPQEIHMENVTENFNMWKNNMAEQMQEDVISLWDESLKPCVKLTPLCVTLICSSNITTQANNITNVTYIGNLENITEEVRNCSFNVTTEIRDKKQKIRALFYKLDLVQMGENGSSEYRLINCNTSVIKQACPKVTFDPIPIHYCTPAGFAILKCNDKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEEEIIIRSENLTNNAKTIIVHLNKSVEINCTRPSNNTRTGVTIGPGQVFYRTGDIIGDIRQAYCEINGKNWNEVLIQVVGKLKEHFNNNTIKFQPPSGGDLEITMHHFNCRGEFFYCNTTRLFNNTCIENGTMENGTMVEGCNETIILPCRIKQIINMWQGAGQAMYAPPISGTINCVSNITRILLTRDGGANNGTDETFRPGGGNIKDNWRNELYKYKVVQIEPLGIAPTRARRGVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MEAEDDERAEAEAEARREKEAGNAAYRKLYLETAVRHYTRGALLDPRDISFLTNRAAAYLLMSKYKECVRDCDEAVEKGRELRADNKLVARALARKASALLKLAACAADYDPAIRALQQSLAEHYSEETLAKLGEAEEARKEIEERERLDQEAADHHRDRGNDFFKQKRYQEAAMHYTEAMKKNPKDPRVFSNRAQCHIYLGALPEGLEDADKCIALDPTFLKGYLRKAKVQLLMGNYEIALATYVEGLKCDPNNLEVLDGLRRCAACIKRANGGDSRAEDLREILGDLHLNDDLCNKLQKSMDEAAVLKKEASDERLKRIESERLARTLEDLYLSQVQQRKETEESLSRVQQEFEQLKIQQDEVTVELQRVNEQNENLLGQLSDSREHFEWLLSEHDQLLRERDNAVREVEELRQKRGQMLSVLVTAMHCEFSSSEVESATENFSNSLKIGEGGFGCVYKGILRNMTVAIKVLRPDSLQGQSQFEQEVSILSRVRHPHLVTLLGACSESSTLVYEFLPNGSLEDFLMCSDKRQTLTWQARIRIIAEICSALIFLHKNKPHPVVHGDLKPANILLGVNLVSKLSDFGISRLLIQSSTNNTTLYRTMHPVGTPLYMDPEFLSTGELTPQSDVYSFGIVVLRLLTGKPPVGIKNIVEDAMEKGDLNSVIDTSVGEWPHLHIEQLAYLALRCTELSRRCRPDLSGEVWAIVEAIRDAALSSPSSSRSAQDQNSPPSYFICPISQDIMDDPHIAADGFTYEAEAIRSWLCNGHDTSPMTNLLLEHEELIPNRALRSAIQEWLQQHSMSL

Annotated regions:
phrase: PSYFICPISQDIMDDPHIAADGFTYEAEAIRSWLCNGHDTSPMTNLLLEHEELIPNRALRSAIQEWLQQH
type: DOMAIN
name: Ubox_domain
description: U-box domain

phrase: LKGYLRKAKVQLLMGNYEIALATYVEGLKCDPN
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: PRVFSNRAQCHIYLGALPEGLEDADKCIALDPT
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: ISFLTNRAAAYLLMSKYKECVRDCDEAVEKGRE
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: ADHHRDRGNDFFKQKRYQEAAMHYTEAMKKNPK
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: LKGYLRKAKVQLLMGNYEIALATYVEGLKCDPN
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: YFICPISQDIMDDPHIAADGFTYEAEAIRSWLCNGHDTSPMTNLLLEHEELIPNRALRSAIQE
type: DOMAIN
name: Ubox_domain
description: U-box domain

phrase: IGEGGFGCVYKGILRNMTVAI
type: BINDING_SITE
name: Protein_kinase_ATP_BS
description: Protein kinase, ATP binding site

phrase: ADHHRDRGNDFFKQKRYQEAAMHYTEAMKKNPK
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: FSNSLKIGEGGFGCVYKGILRNMTVAIKVLRPDSLQGQSQFEQEVSILSRVRHPHLVTLLGACSESSTLVYEFLPNGSLEDFLMCSDKRQTLTWQARIRIIAEICSALIFLHKNKPHPVVHGDLKPANILLGVNLVSKLSDFGISRLLIQSSTNNTTLYRTMHPVGTPLYMDPEFLSTGELTPQSDVYSFGIVVLRLLTGKPPVGIKNIVEDAMEKGDLNSVIDTSVGEWPHLHIEQLAYLALRCTELSRRCRPDLSGEVWAIVEA
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: SLKIGEGGFGCVYKGILRNMTVAIKVLRPDSLQGQSQFEQEVSILSRVRHPHLVTLLGACSESSTLVYEFLPNGSLEDFLMCSDKRQTLTWQARIRIIAEICSALIFLHKNKPHPVVHGDLKPANILLGVNLVSKLSDFGISRLLIQSSTNNTTLYRTMHPVGTPLYMDPEFLSTGELTPQSDVYSFGIVVLRLLTGKPPVGIKNIVEDAM
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: FSNSLKIGEGGFGCVYKGILRNMTVAIKVLRPDSLQGQSQFEQEVSILSRVRHPHLVTLLGACSESSTLVYEFLPNGSLEDFLMCSDKRQTLTWQARIRIIAEICSALIFLHKNKPHPVVHGDLKPANILLGVNLVSKLSDFGISRLLIQSSTNNTTLYRTMHPVGTPLYMDPEFLSTGELTPQSDVYSFGIVVLRLLTGKPPVGIKNIVEDAMEKGDLNSVIDTSVGEWPHLHIEQLAYLALRCTELSRRCRPDLSGEVWAIVEAIRDAA
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: VVHGDLKPANIL
type: ACTIVE_SITE
name: Ser/Thr_kinase_AS
description: Serine/threonine-protein kinase, active site

phrase: SPPSYFICPISQDIMDDPHIAADGFTYEAEAIRSWLCNGHDTSPMTNLLLEHEELIPNRALRSAIQEWLQQHSM
type: DOMAIN
name: Ubox_domain
description: U-box domain
Protein sequence:
MLTWLSRTNYDFPPLDKALQEPNGLLAAGGDLDPRRLIAAYRHGCFPWYQDGQPILWWSPDPRTVLLPEELHVSRSLAKCLRQQRFEVTFNRDFRAVIQACAAPRDYADGTWITTPMQLAYQELHLRGVAHSVEVWQAGQLVGGLYGLAMGRLFFGESMFSRADNASKVGFVTLVRHLRDAGFVLIDCQMPTRHLHSLGARAISREAFADYLQRYRDESPSGTLDF

Annotated regions:
Protein sequence:
MHRALLNASRRVATVRSMASTVEGDAFRLSEYSSKYLGHRKAAFTEKLEIVNADDTPALPIYRVTNAVGDVIDKSQDPNFDEQTSLKMYKTMTQLNIMDRILYDSQRQGRISFYMTSFGEEGNHVGSAAALEPQDLIYGQYREAGVLLWRGYTMENFMNQCYGNADDLGKGRQMPMHFGTKERNFVTISSPLTTQLPQAVGSAYAFKQQKDNNRIAVVYFGDGAASEGDAHAAFNFAATLKCPIIFFCRNNGYAISTPTSEQYGGDGIAGKGPAYGLHTIRVDGNDLLAVYNATKEARRVALTNRPVLIEAMTYRLGHHSTSDDSTAYRSSDEVQTWGDKDHPITRFKKYITERGWWNEEKEMEWQKEVKKRVLTEFAAAEKRKKAHYHDLFEDVYDELPLRLRRQRDELDAHVAEYKEHYPMLETLQSKP

Annotated regions:
phrase: YKTMTQLNIMDRILYDSQRQGRISFYMTSFGEEGNHVGSAAALEPQDLIYGQYREAGVLLWRGYTMENFMNQCYGNADDLGKGRQMPMHFGTKERNFVTISSPLTTQLPQAVGSAYAFKQQKDNNRIAVVYFGDGAASEGDAHAAFNFAATLKCPIIFFCRNNGYAISTPTSEQYGGDGIAGKGPAYGLHTIRVDGNDLLAVYNATKEARRVALTNRPVLIEAMTYRLGHHSTSDDSTAYRSSDEVQTWGDKDHPITRFKKYITERGWWNEEKEMEWQKEVKKRVLTEFAAAEKRKKA
type: DOMAIN
name: DH_E1
description: Dehydrogenase, E1 component
Protein sequence:
MSEETKADETKVLDSIDILRILALLPHRYPFLMVDRIEAIDSDLSCVGYKNVTANEPHFQGHFPNNPVMPGVLIIEGMAQTAGAICIHAKGADRKPSLVYFMTIDEAKFRRPVRPGDVLEYHMTRLNKRRNMWWYRGEARVGGEIVAEARVGAMIAEE

Annotated regions:
Protein sequence:
MSDIKKVVLAYSGGLDTSVILKWLQDTYQCEVVTFTADLGQGEELEPARQKALQFGIKPEQIYIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIVNATGADAICHGATGKGNDQVRFELGAYALKPDVKVIAPWREWDLLSREKLLAYAESHGIPIDMKHRQGGSPYSMDANLLHISYEGRHLEDPSAEAEEDMWRWTVSPEKAPDAAEYIELTYAKGDVVAIDGQQMPAHEVLAKLNELGGKHGIGRLDLVENRYVGMKSRGCYETPGGTILLKAHRAIESITLDREVAHLKDDLMPRYASLIYNGYWWAPERRALQVLIDHTQAHVNGTVRLKLYKGNVIVVGRDSKNDSLFDSTIATFEDDAGAYDQKDAGGFIKLNALRMRIAAKLDARRK

Annotated regions:
phrase: AYSGGLDT
type: CONSERVED_SITE
name: Arginosuc_synth_CS
description: Argininosuccinate synthase, conserved site

phrase: GATGKGNDQVR
type: CONSERVED_SITE
name: Arginosuc_synth_CS
description: Argininosuccinate synthase, conserved site

phrase: YSMDANLLHISYEGRHLEDPSAEAEEDMWRWTVSPEKAPDAAEYIELTYAKGDVVAIDGQQMPAHEVLAKLNELGGKHGIGRLDLVENRYVGMKSRGCYETPGGTILLKAHRAIESITLDREVAHLKDDLMPRYASLIYNGYWWAPERRALQVLIDHTQAHVNGTVRLKLYKGNVIVVGRDSKNDSLFDSTIATFEDDAGAYDQKDAGGFIKLNALRMR
type: DOMAIN
name: Arginosuc_syn_C
description: Arginosuccinate synthase C-terminal domain

phrase: KVVLAYSGGLDTSVILKWLQDTYQCEVVTFTADLGQGEELEPARQKALQFGIKPEQIYIDDLREEFVRDFVFPMFRANTVYEGEYLLGTSIARPLIAKRLIEIVNATGADAICHGATGKGNDQVRFELGAYALKPDVKVIAPWREWDLLSREKLLAYAESHGI
type: DOMAIN
name: Arginosuc_syn_N
description: Arginosuccinate synthase-like, N-terminal domain
Protein sequence:
MISAQACGANGKMKDYHYSGPVEHKFSPYAFNGGTVLAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKSMTSGAIAAMLSTILYGRRFFPYYVYNIIGGLDEEGRGAVYSFDPVGSYQRDTYKAGGSASAMLQPLLDNQIGFKNMENVEQVPLSQEKAVQLVKDVFISAAERDVYTGDALKICIITKEGIREEIVPLRKD

Annotated regions:
phrase: LAVAGEDFALVASDTRLSEGYSIHSRDSPKCYKLTDTTVIGCSGFHG
type: CONSERVED_SITE
name: Proteasome_bsu_CS
description: Proteasome beta-type subunit, conserved site
Protein sequence:
MAEITKADVVAFIEKMTVLELAELVKELEEKFGVSAAAPVAVAAAAPAAAAEAAEEKTEFDVILKSAGANKINVIKVVRTLTSLGLKEAKDLVDGAPSPVKTGISKAEAEEAQKQLVEAGAEVEIK

Annotated regions:
phrase: FDVILKSAGANKINVIKVVRTLTSLGLKEAKDLVDGAPSPVKTGISKAEAEEAQKQLVEAGAEVEI
type: DOMAIN
name: Ribosomal_bL12_C
description: Large ribosomal subunit protein bL12, C-terminal

phrase: TKADVVAFIEKMTVLELAELVKELEEKFGVSAAAPVAVAAAAPAAAA
type: DOMAIN
name: Ribosomal_bL12_oligo
description: Large ribosomal subunit protein bL12, oligomerization
Protein sequence:
MVKNLIFWLVITVVLMSVFQNFNSSDTSNHRVDYSTFLSEVNQDQVREAYINGRIISVTKKDSSKYITYIPINDPKLLDNLLTKNVKIVGEIPEEPSLLISIFISWFPMLLLIGVWIFFMRQMQMGGGKGAMSFGKSKARMLSEDQIQTTFADVAGCDEAKEEVSELVEYLKEPSRFQKLGGKIPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHARKSAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGVILIAATNRPDVLDPALLRPGRFDRQVIVALPDVRGRKQILKVHMRKVPLSEDVDPMIIARGTPGFSGADLANLVNEAALFAARFNNRVVSMIHFEKAKDKIMMGSERRSMVMSDFQKESTAYHEAGHVIIGRLVPDHDPAHKVTIIPRGQALGITFFLPESDILSISRQKLESQISTLYGGRLAEEIIYGSQNVSTGAFNDIKVATNLARNMVTQWGFSDKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDEEVKLLIEVNYNRARKILNENLDILHAMKDALIKYETIDSLQIDDLMERREVRKPKGWLEVDQKKDI

Annotated regions:
phrase: ILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHARKSAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGVILIAATNRPDVLDPALLRPGRFDRQVI
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: MVMSDFQKESTAYHEAGHVIIGRLVPDHDPAHKVTIIPRGQALGITFFLPESDILSISRQKLESQISTLYGGRLAEEIIYGSQNVSTGAFNDIKVATNLARNMVTQWGFSDKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDEEVKLLIEVNYNRARKILNENLDILHAMKDALIKYETIDSLQID
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: DVDPMIIARGTPGFSGADLANLVNEAALFAARFNNRVVSMIHFE
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: LIFWLVITVVLMSVFQNFNSSDTSNHRVDYSTFLSEVNQDQVREAYINGRIISVTKKDSSKYITYIPINDPKLLDNLLTKNVKIVGEI
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular

phrase: IPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHARKSAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGVILIAATNRPDVLDPALLRPGRFDRQVIVALP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VILIAATNRPDVLDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site
Protein sequence:
MAQSIVEAPIRVDTSRKIIHVDMDAFYASIEEREHPAYKTQPLVIAHDPRQTGGRGVVTTANYVARQFGVHSAMPAAKALELCPTAVFKTPNFPLYREVSAQIHRIFHEYTEMIEPIAFDEAYLDVTTNKKHIHSAVELAHRLQQEIWHQTHLTCSTGISYNKFIAKLASDYRKPAGVTIVLPQDAEPFLLREPIEKFRGVGKKTVPKMHDLGIKTGQDLYAQSELDLIKQFGKLGYILYRRVRGSDDRPVEYLRERKSIGKERTFGPFLQSTTEVNTHLKAIAKLVAASMQSHQRHGKTLVLKLRYGDFVTITKRRTFGEFIPNDAALFEQYAEEIFEEVVDDHFNSGIRLLGITLTGLAPLAFENLTLPLYPNDN

Annotated regions:
phrase: RKSIGKERTFGPFLQSTTEVNTHLKAIAKLVAASMQSHQRHGKTLVLKLRYGDFVTITKRRTFGEFIPNDAALFEQYAEEIFEEVVDDHFNSGIRLLGITLTGLAPLAFENL
type: DOMAIN
name: DNA_pol_Y-fam_little_finger
description: DNA polymerase, Y-family, little finger domain

phrase: IIHVDMDAFYASIEEREHPAYKTQPLVIAHDPRQTGGRGVVTTANYVARQFGVHSAMPAAKALELCPTAVFKTPNFPLYREVSAQIHRIFHEYTEMIEPIAFDEAYLDVTTNKKHIHSAVELAHRLQQEIWHQTHLTCSTGISYNKFIAKLASDYRKPAGVTIVLPQDAEPFLLREPIEKFRGV
type: DOMAIN
name: UmuC
description: UmuC domain

phrase: VDMDAFYASIEEREHPAYKTQPLVIAHDPRQTGGRGVVTTANYVARQFGVHSAMPAAKALELCPTAVFKTPNFPLYREVSAQIHRIFHEYTEMIEPIAFDEAYLDVTTNKKHIHSAVELAHRLQQEIWHQTHLTCSTGISYNKFIAKLAS
type: DOMAIN
name: UmuC
description: UmuC domain
Protein sequence:
MLESIRLYKDLHDFELQGPTRVVEWIGDKSICVAGYDSAKRNEILQLLIPQKLHAKENPGLCPERDLKVEHGGFIDEPVYSLKHIPQSSLIVTSGPASCPLWVWQIGPEDRDVIQPISTLPSDAGKGTWTRIATTTSASPQILHGSQADSIRLTDIESTKQIHTLGVSGSDGVSTLCFLDSRTVFVCCMNGRQFIADIRMPGAASEGRVGEEGLSCVTWCSAVHPSKEDVCSTVASVSSEGHMCLTDPRNLSVPLKCATWCTPIPAASEQFLSICWAPALSDCISVSGFGGSVQIFDTKRWDSAMKEREAVFIHKGHSVMGTCEDGREPTVTAHAWHPWKERTVLSAASDGSLHVWNWSDLPVHDGTEL

Annotated regions:
phrase: EREAVFIHKGHSVMGTCEDGREPTVTAHAWHPWKERTVLSAASDGSLHVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: PLKCATWCTPIPAASEQFLSICWAPALSDCISVSGFGGSVQIF
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: GLCPERDLKVEHGGFIDEPVYSLKHIPQSSLIVTSGPASCPLWVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: STKQIHTLGVSGSDGVSTLCFLDSRTVFVCCMNGRQFIA
type: REPEAT
name: WD40_rpt
description: WD40 repeat