nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSKVYDWFNDRLEIQGIADDITSKYVPPHVNIFYCIGGITFTCFIMQVASGFAMTFYYRPTVTEAFASVQYIMTDVNFGWLIRSIHKWSASMMVLTMILHVFRVYLTGGFKKPRELTWVTGVILAVCTVSFGVTGYSLPWDQVGYWAVKIVTGVPDAIPVIGAPLVELLRGGVGVGQSTLTRFYSLHTFVLPLLTAVFMLAHFLMIRKQGISGPL

Annotated regions:
phrase: VYDWFNDRLEIQGIADDITSKYVPPHVNIFYCIGGITFTCFIMQVASGFAMTFYYRPTVTEAFASVQYIMTDVNFGWLIRSIHKWSASMMVLTMILHVFRVYLTGGFKKPRELTWVTGVILAVCTVSFGVTGYSLPWDQVGYWAVKIVTGVPDAIPVIGAPLVELLRGGVGVGQSTLTRFYSLHTFVLPLLTAVFMLAHFLMIRKQGISGP
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: IQGIADDITSKYVPPHVNIFYCIGGITFTCFIMQVASGFAMTFYYRPTVTEAFASVQYIMTDVNFGWLIRSIHKWSASMMVLTMILHVFRVYLTGGFKKPRELTWVTGVILAVCTVSFGVTGYSLPWDQVGYWAVKIVTGVPDAIPVIGAPLVELLRGGVGVGQSTLTRFYSLHTFVLPLLTAVFMLAHFLMIRKQGI
type: DOMAIN
name: Cytochrome_b_N_euk/bac
description: Cytochrome b/b6, N-terminal domain, eukaryotic/bacterial

phrase: TSKYVPPHVNIFYCIGGITFTCFIMQVASGFAMTFYYRPTVTEAFASVQYIMTDVNFGWLIRSIHKWSASMMVLTMILHVFRVYLTGGFKKPRELTWVTGVILAVCTVSFGVTGYSLPWDQVGYWAVKIVTGVPDAIPVIGAPLVELLRGGVGVGQSTLTRFYSLHTFVLPLLTAVFMLAHFLMIRKQ
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain
Protein sequence:
MNNIRNFSIIAHIDHGKSTLADRIISECGAVDSRVMSAQVMDTMDIEKERGITIKAQSVRLTYKLEGQIYILNLIDTPGHVDFSYEVSRSLASCEGALLVVDASQGVEAQTIANVYIALENNLEIIPVINKIDLPAAEPQRVKNEIEHIIGLDCSEAIEVSAKTGVGIKELIETIIRKIPPPKPGENNPFKSLIYDSWFDNYLGALALVRVYDGAVKKGDEVYVMGTDKKHTVLDLMYPNPIAPIKTNELKTGEVGIIVLGLKNVSDVSVGDTITLAKNRALEAIGGFEKAKPFVFAGLYPIDTDKFEDLRDALDKLKLNDSSISYEPETSAALGFGFRVGFLGLLHMEVVKERLEREFGLDLIATAPTVTYEVVQTDGVSVEIQNPSELPPVNKIEFIKEPYVKATIITPSEFLGNIITLLNNRRAVQTKMDYITTTRVLLEYDIPMNEIVMDFYDKLKSATKGYASFDYEPSDYRVGDLVKLDIKVAGEAVDALSIIVPEEKAMSKGRDFVKTMKELVPRQLFEVAIQASIGNKVIARETVKSMGKNVTAKCYGGDITRKRKLLEKQKEGKKRMKAIGKVTLPQEAFLSVLKID

Annotated regions:
phrase: FIKEPYVKATIITPSEFLGNIITLLNNRRAVQTKMDYITTTRVLLEYDIPMNEIVMDFYDKLKSATKGYASFDYEPSDYRVGDLVKLD
type: DOMAIN
name: EFG_V-like
description: Elongation factor EFG, domain V-like

phrase: EPYVKATIITPSEFLGNIITLLNNRRAVQTKMDYITTTRVLLEYDIPMNEIVMDFYDKLKSATKGYASFDYEPSDYRVG
type: DOMAIN
name: LepA_IV
description: Elongation factor 4, domain IV

phrase: RNFSIIAHIDHGKSTLADRIISECGAVDSRVMSAQVMDTMDIEKERGITIKAQSVRLTYKLEGQIYILNLIDTPGHVDFSYEVSRSLASCEGALLVVDASQGVEAQTIANVYIALENNLEIIPVINKIDLPAAEPQRVKNEIEHIIGLDCSEAIEVSAKTGVGIKELIET
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: DTMDIEKERGITIKA
type: CONSERVED_SITE
name: G_TR_CS
description: Tr-type G domain, conserved site

phrase: NFSIIAHIDHGKS
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: ERGITIKA
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: NLIDTPGHVD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: RSLASCEGALL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: IIPVINKID
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: NIRNFSIIAHIDHGKSTLADRIISECGAVDSRVMSAQVMDTMDIEKERGITIKAQSVRLTYKLEGQIYILNLIDTPGHVDFSYEVSRSLASCEGALLVVDASQGVEAQTIANVYIALENNLEIIPVINKIDLPAAEPQRVKNEIEHIIGLDCSEAIEVSAKTGVGIKELIETIIRKIP
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: IKEPYVKATIITPSEFLGNIITLLNNRRAVQTKMDYITTTRVLLEYDIPMNEIVMDFYDKLKSATKGYASFDYEPSDYRVGDLVKL
type: DOMAIN
name: EFG_V-like
description: Elongation factor EFG, domain V-like

phrase: NNIRNFSIIAHIDHGKSTLADRIISECGAVDSRVMSAQVMDTMDIEKERGITIKAQSVRLTYKLEGQIYILNLIDTPGHVDFSYEVSRSLASCEGALLVVDASQGVEAQTIANVYIALENNLEIIPVINKIDLPAAEPQRVKNEIEHIIGLDCSEAIEVSAKTGVGIKELIETIIRKIPPP
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: AGEAVDALSIIVPEEKAMSKGRDFVKTMKELVPRQLFEVAIQASIGNKVIARETVKSMGKNVTAKCYGGDITRKRKLLEKQKEGKKRMKAIGKVTLPQEAFLSVL
type: DOMAIN
name: LepA_CTD
description: GTP-binding protein LepA, C-terminal

phrase: GALALVRVYDGAVKKGDEVYVMGTDKKHTVLDLMYPNPIAPIKTNELKTGEVGIIVLGLKNVSDVSVGDTI
type: DOMAIN
name: EFTu-like_2
description: Translation elongation factor EFTu-like, domain 2
Protein sequence:
MFLKVRAEKRLGNFRLNVDFEMGRDYCVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGADITPLPPERRGIGFVPQDYALFPHLSVYRNIAYGLRNVERVERDRRVREMAEKLGIAHLLDRKPARLSGGERQRVALARALVIQPRLLLLDEPLSAVDLKTKGVLMEELRFVQREFDVPILHVTHDLIEAAMLADEVAVMLNGRIVEKGKLKELFSAKNGEVAEFLSARNLLLKVSKILD

Annotated regions:
phrase: FLKVRAEKRLGNFRLNVDFEMGRDYCVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGADITPLPPERRGIGFVPQDYALFPHLSVYRNIAYGLRNVERVERDRRVREMAEKLGIAHLLDRKPARLSGGERQRVALARALVIQPRLLLLDEPLSAVDLKTKGVLMEELRFVQREFDVPILHVTHDLIEAAMLADEVAVMLNGRIVEKGKLKELFSAKNGEVAEFL
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: DFEMGRDYCVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGADITPLPPERRGIGFVPQDYALFPHLSVYRNIAYGLRNVERVERDRRVREMAEKLGIAHLLDRKPARLSGGERQRVALARALVIQPRLLLLDEP
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: LSGGERQRVALARA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: GRDYCVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGADITPLPPERRGIGFVPQDYALFPHLSVYRNIAYGLRNVERVERDRRVREMAEKLGIAHLLDRKPARLSGGERQRVALARALVIQPRLLLLDEPLSAVDLKTKGVLMEELRFVQREFDVPILHVTHDLIEAAMLADEVAVMLNG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain
Protein sequence:
MRKIALFPGSFDPMTNGHLNLIERSAKLFDEVIIGVFINTSKQTLFTPEEKKYLIEEATKEMPNVRVIMQETQLTVESAKSLGANFLIRGIRNVKDYEYEKDIAKMNQHLAPEIETVFLLAEEPYAHVSSSLLKEVLRFGGDVSDYLPPNIYHALKQKKNDWS

Annotated regions:
phrase: LFPGSFDPMTNGHLNLIERSAKLFDEVIIGVFINTSKQTLFTPEEKKYLIEEATKEMPNVRVIMQETQLTVESAKSLGANFLIRGIRNVKDYEYEKDIAKMNQHLAPEIETVFLLAEEPYAHVSSSLLK
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: IALFPGSFDPMTNGHLNLIERSAKLFDEVIIGVFINTSKQTLFTPEEKKYLIEEATK
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain
Protein sequence:
MTTNPKPAYQRILLKLSGEALQGEEGFGIDPAVLDRMAQEVKELVELGVQVGVVIGGGNLFRGAGLAEAGMNRVVGDHMGMLATVMNGLAMRDALHRAYVNARVMSAIPLKGVCDDYNWADAIRELRQGRVVIFSAGTGNPFFTTDSAACLRGIEIEADVVLKATKVDGVFTADPVANPDAELYDKLSYTEVLDKELKVMDLAAFTLARDHKMPIRVFNMNKPGALRRVVMGEAEGTLINADA

Annotated regions:
phrase: RILLKLSGEALQGEEGFGIDPAVLDRMAQEVKELVELGVQVGVVIGGGNLFRGAGLAEAGMNRVVGDHMGMLATVMNGLAMRDALHRAYVNARVMSAIPLKGVCDDYNWADAIRELRQGRVVIFSAGTGNPFFTTDSAACLRGIEIEADVVLKATKVDGVFTADPVANPDAELYDKLSYTEVLDKELKVMDLAAFTLARDHKMPIRVF
type: DOMAIN
name: Asp/Glu/Uridylate_kinase
description: Aspartate/glutamate/uridylate kinase
Protein sequence:
MQTRKTFSWIKEQINRSISVSLMIYIITRPSISIAYPIFAQQGYENPREATGRIVCANCHLANKPVDIEVPQTVLPDTVFEAVVRIPYDMQLKQVLANGKRGTLNVGAVLILPEGFELAPADRISPEMKEKIGNLSFQSYRPNKKNILVIGPVPGQKYSEITFPILSPDPATTKEVHFLKYPIYVGGNRGRGQIYPDGSKSNNTVYNATSAGIVGKIIRKEKGGYEITIADASDGRQVVDIIPPGPELLVSEGESIKLDQPLTSNPNVGGFGQGDAEIVLQDPLRVQGLLFFLASVILAQIFLVLKKKQFEKVQLSEMNF

Annotated regions:
phrase: YPIFAQQGYENPREATGRIVCANCHLANKPVDIEVPQTVLPDTVFEAVVRIPYDMQLKQVLANGKRGTLNVGAVLILPEGFELAPADRISPEMKEKIGNLSFQSYRPNKKNILVIGPVPGQKYSEITFPILSPDPATTKEVHFLKYPIYVGGNR
type: DOMAIN
name: Cyt_f_lg_dom
description: Cytochrome f large domain
Protein sequence:
MLNGKDIVLGICGGIAAYKAAELVREITRGGGQVHVILTRSAREFITPLTMQTLSGNVVATDLFKLYEEKEIGHISLARRAQALVIAPATANIIGKIAQGIADDMLSTVVMATKAPVLIVPAMNEAMWENCAVQHNVDTLKQRGYHFVEPGWGDLACGVRGTGRMADIRDIIEELEWVLAPKDFQGQTVLVTAGPTREFIDPVRFISNPSSGKTGFAIARAFRQRGAQVTLISGPVSISPPAGVRCITVESAEDMRRAVTAHFKDATIIVKSAAVADYRPSRTAAQKIKKGDTPLTLKLERTADILAELGGKKGKRILVGFAAETNHITAHAAQKLRQKHLDLIVANDVSRPGMGFESDVNEVQFIFADGTTETLPPLPKEDIARHVCDRISTLLKNRTKK

Annotated regions:
phrase: QGQTVLVTAGPTREFIDPVRFISNPSSGKTGFAIARAFRQRGAQVTLISGPVSISPPAGVRCITVESAEDMRRAVTAHFKDATIIVKSAAVADYRPSRTAAQKIKKGDTPLTLKLERTADILAELGGKKGKRILVGFAAETNHITAHAAQKLRQKHLDLIVANDVSRPGMGFESDVNEVQ
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal

phrase: KDIVLGICGGIAAYKAAELVREITRGGGQVHVILTRSAREFITPLTMQTLSGNVVATDLFKLYEEKEIGHISLARRAQALVIAPATANIIGKIAQGIADDMLSTVVMATKAPVLIVPAMNEAMWENCAVQHNVDTLKQRGYHFVEPGWGDLACGVRGTGRMADIRDIIEE
type: DOMAIN
name: Flavoprotein
description: Flavoprotein
Protein sequence:
MGWNGGLTSPSMEEHFYPFLIERRPSYMEEDEEEHEDEDLSLVLEKKDKDLLLAAELGKALLERNDQLMKAKDALEEELRETLETIEQEKHDMRLKMEVQESEWRAQVADLESDLAEARLQMQQLLSEQRECGRESASAAQELSEQNQRLVEQLAQASQVEQALNMELKSLREENRDLTISRGQFAPCLQSLRSENVLLLENKKEMESQTKQLQDENDNVQNQLISAKEGIFHLQRQKKDAELQVQQLQLEAQKLRDSQRTLQLQVKELQEELHMRDSQFSTHFSLHSEIQQSTAGQDHEMTTEAFPGLPCLPPSPYNLQKMGRNSVETQSITSDYMDTYLTEREGDLLRDSEEETIRLQDKVTMQHVELTTLQEEVQRLQDLLQQNNLDSIAKQAVLDRDEALMKKGELEQELARCQMEKESLNLQLLSTIQQKVMLSQELEAWQDDMQIVINQQLQSQKQQETQKVPETPQNSFMRRDSKQGRIFSFFKNI

Annotated regions:
Protein sequence:
MAKIGRALISVSEKTGVVEFSRALAGYGVEILSTGGTAKLLREAGIAVKDVSEFTGFPEMLDGRVKTLHPKVHGGILGMRENPAHVAKMQEHGIEPIDMVVVNLYPFEATVAKEDCTMEDAIENIDIGGPTMLRSAAKNNRDVTVVVDHADYAVVLDEMKNSGGSVSRETNFRLAVKVYQHTAAYDGAISNWLGARTGEGVAPFPDTLTMQYKLAQGMRYGENPHQSGAFYVEKGSRESSISTARQIQGKELSYNNIGDTDAALECVKQFTEPACVIVKHANPCGVALGANIMEAYDKAYKTDPESAFGGIIAFNRELDESTARAIVERQFVEVIIAPKVTEAASEIVAAKKNVRLMECGFWPENPAPRFDYKRVNGGMLVQDADLELFTELKVVTKRAPTDKEMEDLLFTWRVAKFVKSNAIVYGRDNSTVGVGAGQMSRVNSARIAAIKAEHAGIPVQGAVMASDAFFPFRDGLDNAASVGVTAVIQPGGSMRDAEVIAAADEHGIAMVFTSMRHFRH

Annotated regions:
phrase: GVVEFSRALAGYGVEILSTGGTAKLLREAGIAVKDVSEFTGFPEMLDGRVKTLHPKVHGGILGMRENPAHVAKMQEHGIEPIDMVVVNLYPFEATVAKEDCTMEDAIENIDIGGP
type: DOMAIN
name: MGS-like_dom
description: Methylglyoxal synthase-like domain

phrase: MAKIGRALISVSEKTGVVEFSRALAGYGVEILSTGGTAKLLREAGIAVKDVSEFTGFPEMLDGRVKTLHPKVHGGILGMRENPAHVAKMQEHGIEPIDMVVVNLYPFEATVAKEDCTMEDAIENIDIGGPTMLRSAAKNNRDVTVV
type: DOMAIN
name: MGS-like_dom
description: Methylglyoxal synthase-like domain

phrase: GVVEFSRALAGYGVEILSTGGTAKLLREAGIAVKDVSEFTGFPEMLDGRVKTLHPKVHGGILGMRENPAHVAKMQEHGIEPIDMVVVNLYPFEATVAKEDCTMEDAIENIDIGGP
type: DOMAIN
name: MGS-like_dom
description: Methylglyoxal synthase-like domain
Protein sequence:
MARGQNIRKRTFSDMDTPSDKNIGIHTNSLPKNNLYRRILFKGKISNYSISKDSLAKDHSSKHSISKNGLIGKKRPAPLDISFQSMNSSISSSTQKKTRILDEEIKDQSLSNENDTDSPVIVDITLKPSYMSKTSRITEIIHKMKELNMNRIEDGSSFNKKRSEHDDKNILLHTMEMEEEDCEIEEDIAIDSPYLNTSLSEDDTDSIVGTDYSEKEKETISETESSSDDESYSLYDSF

Annotated regions:
Protein sequence:
MTKKNTLLLIDGYGFVFRAYYAQQPLTSPKGEPVGALYGFTSMLLKLLNDFKPKHAAVVFDSGGKNFRHEIYPEYKANRPPPPEDLIAQLPLVRDVARNLNFPILEKNGFEADDIIATFAAKTASIGEEVVVISSDKDLLQLMNDNVKIYDPLKAKYITEDNVVEKFGVTSDKLREVMALIGDKSDNIPGVPSIGPKTASSLITQFGTVENIFNSLEQVSSIKQRETLQNSKEAALISWQLIGLDYNVDMDFKLDALEWSPPDHNKLTEFLHEYGFKSLYKRAENLFDIKISEHKEVIEEKAVEIKDISNKAELEAFAEKAKKVGIFGIYILQNKGANIAFILSLKNQAYIIKISNEANNLFTYNSKADNEWFTDIIFNLLTDQSIKKITYSLKPLLKFYASRAQQITAIEDLELMNYALSAGLPQKNLFEAVEKEATIEEAAKIVVGFIDLYQQTILELKDNKAFRIYKEIDLPVCFVIDKMEKAGIKVDANYLNQLSSEFGAEILKLEEEIFVLSGMKFNIGSPKQLGEILFEKMQLPFGKTSAKANSYSTGADILEKLSEQGYPIADLLLRWRQLTKLKNTYTDSLPKQIDNITRRIHTTFLQTSTTTGRLSSQEPNLQNVPIRSGEGNKIRQAFVAEQGYKLISADYSQIELRILSHIADIKALKQAFINKDDIHTQTACQIFNLQKEELTSEHRRKAKAINFGIIYGISAFGLAKQLNVSNTEAAEYIKKYFAEYKGVQEYMEATKSFAQANGYVTDFFGRKCFVPLINDKRLKQFAERAAINAPIQGTNADIIKIAMTLLDREIEKRKLKTRLVLQIHDELLFEAPIDEIETIMPIIKQIMENSTNMDVPIITEIRAGNNWMEIH

Annotated regions:
phrase: NYLNQLSSEFGAEILKLEEEIFVLSGMKFNIGSPKQLGEILFEKMQLPFGKTSAKANSYSTGADILEKLSEQGYPIADLLLRWRQLTKLKNTYTDSLPKQIDNITRRIHTTFLQTSTTTGRLSSQEPNLQNVPIRSGEGNKIRQAFVAEQGYKLISADYSQIELRILSHIADIKALKQAFINKDDIHTQTACQIFNLQKEELTSEHRRKAKAINFGIIYGISAFGLAKQLNVSNTEAAEYIKKYFAEYKGVQEYMEATKSFAQANGYVTDFFGRKCFVPLINDKRLKQFAERAAINAPIQGTNADIIKIAMTLLDREIEKRKLKTRLVLQIHDELLFEAPIDEIETIMPIIKQIMENSTNMDVPIITEIRAGNNWM
type: DOMAIN
name: DNA-dir_DNA_pol_A_palm_dom
description: DNA-directed DNA polymerase, family A, palm domain

phrase: TLLLIDGYGFVFRAYYAQQPLTSPKGEPVGALYGFTSMLLKLLNDFKPKHAAVVFDSGGKNFRHEIYPEYKANRPPPPEDLIAQLPLVRDVARNLNFPILEKNGFEADDIIATFAAKTASIGEEVVVISSDKDLLQLMNDNVKIYDPLKAKYITEDNVVEKF
type: DOMAIN
name: 5-3_exonucl_a-hlix_arch_N
description: 5'-3' exonuclease, alpha-helical arch, N-terminal

phrase: DKLREVMALIGDKSDNIPGVPSIGPKTASSLITQFGTVENIFNSLEQVSSIKQRETLQNSKEAALISWQLIG
type: DOMAIN
name: DNA_polI_H3TH
description: DNA polymerase I-like, H3TH domain

phrase: VTSDKLREVMALIGDKSDNIPGVPSIGPKTASSLITQFGTVENIFNSLEQVSSIKQRETLQNSKEAALISWQLIGLDYNVDMDFKLDALEWSPPD
type: DOMAIN
name: DNA_polI_H3TH
description: DNA polymerase I-like, H3TH domain

phrase: RRKAKAINFGIIYGISAFG
type: CONSERVED_SITE
name: DNA-dir_DNA_pol_A_CS
description: DNA-directed DNA polymerase, family A, conserved site

phrase: KKNTLLLIDGYGFVFRAYYAQQPLTSPKGEPVGALYGFTSMLLKLLNDFKPKHAAVVFDSGGKNFRHEIYPEYKANRPPPPEDLIAQLPLVRDVARNLNFPILEKNGFEADDIIATFAAKTASIGEEVVVISSDKDLLQLMNDNVKIYDPLKAKYITEDNVVEKFGVTSDKLREVMALIGDKSDNIPGVPSIGPKTASSLITQFGTVENIFNSLEQVSSIKQRETLQNSKEAALISWQLIGLDYNVDMDFKLDALEW
type: DOMAIN
name: 5-3_exonuclease
description: 5'-3' exonuclease

phrase: GNKIRQAFVAEQGYKLISADYSQIELRILSHIADIKALKQAFINKDDIHTQTACQIFNLQKEELTSEHRRKAKAINFGIIYGISAFGLAKQLNVSNTEAAEYIKKYFAEYKGVQEYMEATKSFAQANGYVTDFFGRKCFVPLINDKRLKQFAERAAINAPIQGTNADIIKIAMTLLDREIEKRKLKTRLVLQIHDELLFEAPID
type: DOMAIN
name: DNA-dir_DNA_pol_A_palm_dom
description: DNA-directed DNA polymerase, family A, palm domain

phrase: SDKLREVMALIGDKSDNIPGVPSIGPKTASSLITQ
type: CONSERVED_SITE
name: HhH2
description: Helix-hairpin-helix motif, class 2
Protein sequence:
MASFAQAAKSLLLKEFVGAFFLSMRQFFAPKATLNYPHEKGPVSPRFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVDAIVEGPNFEFATETREELYYDKDKLLANGDRWEREIARNIAMDAPYR

Annotated regions:
phrase: CIYCGFCQEAC
type: CONSERVED_SITE
name: 4Fe4S_Fe_S_CS
description: 4Fe-4S ferredoxin, iron-sulphur binding, conserved site

phrase: RCIACKLCEAICPAQAITIEAGPRRNDGTRRTVRYDIDMVKCIYCGFCQEACPVD
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: LRRYPNGEERCIACKLCEAICPAQAITIEA
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: VRYDIDMVKCIYCGFCQEACPVDAIVEGP
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain
Protein sequence:
TEGPDFYIPMVNTSGLVRSPYEYPQYYLVNPAAFAFLGAYMFFLIIIGFPVNFLTLYVTLEHKKLRTPLNYILLNLAVSDLFMVIGGFTTTMYSSMHGYFVLGRLGCNIEGFFATLGGMISLWSLAVLAIERWVVVCKPISNFRFGENHAIMGVSMTWLLALSCTVPPLVGWSRYIPEGMQCACGIDYYTRAEGYNNESFVIYMFTCHFSVPLFIIFFCYGRLLCAVKEAAAAQQESETTQRAEREVTRMVVIMVIGFLVCWLPYASVAWFIFTHQGSEFGPLFMAIPSFFAKSSSIYNPVIYICMNKQFRQCMITTLFCGKNPFEGEEEGSSTKTEASSASSVSPA

Annotated regions:
phrase: IPSFFAKSSSIYNPVI
type: BINDING_SITE
name: Retinal_BS
description: Visual pigments (opsins) retinal binding site

phrase: TEGPDFYIPMVNTSGLVRSPYEYPQYYLVNPAA
type: DOMAIN
name: Rhodopsin_N
description: Rhodopsin, N-terminal

phrase: VNFLTLYVTLEHKKLRTPLNYILLNLAVSDLFMVIGGFTTTMYSSMHGYFVLGRLGCNIEGFFATLGGMISLWSLAVLAIERWVVVCKPISNFRFGENHAIMGVSMTWLLALSCTVPPLVGWSRYIPEGMQCACGIDYYTRAEGYNNESFVIYMFTCHFSVPLFIIFFCYGRLLCAVKEAAAAQQESETTQRAEREVTRMVVIMVIGFLVCWLPYASVAWFIFTHQGSEFGPLFMAIPSFFAKSSSIYNPVI
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM
Protein sequence:
MAASSNSSLSGSSVSSDAEEYQPPIWKSYLYQLQQEAPRPKRIICPREVENRPKYYGREFHGIISREQADELLGGVEGAYILRESQRQPGCYTLALRFGNQTLNYRLFHDGKHFVGEKRFESIHDLVTDGLITLYIETKAAEYISKMTTNPIYEHIGYATLLREKVSRRLSRSKNEPRKTNVTHEEHTAVEKISSLVRRAALTHNDNHFNYEKTHNFKVHTFRGPHWCEYCANFMWGLIAQGVRCSDCGLNVHKQCSKHVPNDCQPDLKRIKKVYCCDLTTLVKAHNTQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRDGEKADISANVYPDINIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEVLMLLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLMRPPEDSTLTTLHDMRYQKLIVQILIENEDVLF

Annotated regions:
phrase: HNFKVHTFRGPHWCEYCANFMWGLIAQGVRCSDCGLNVHKQCSKHVPND
type: DOMAIN
name: PE/DAG-bd
description: Protein kinase C-like, phorbol ester/diacylglycerol-binding domain

phrase: FHGIISREQADELLGGVEGAYILRESQRQPGCYTLALRFGNQTLNYRLFHDGKHFVGEKRFESIHDLV
type: DOMAIN
name: SH2
description: SH2 domain

phrase: HNFKVHTFRGPHWCEYCANFMWGLIAQGVRCSDCGLNVHKQCSKHVPNDCQ
type: DOMAIN
name: PE/DAG-bd
description: Protein kinase C-like, phorbol ester/diacylglycerol-binding domain

phrase: CDLTTLVKAHNTQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRDGEKADISANVYPDINIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEVLMLLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLMRPPEDSTLTTLHDMRYQKLIVQILIENEDVL
type: DOMAIN
name: RhoGAP_dom
description: Rho GTPase-activating protein domain

phrase: YCCDLTTLVKAHNTQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRDGEKADISANVYPDINIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEVLMLLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLMRPPEDSTLTTLHDMRYQKLIVQILIENEDVL
type: DOMAIN
name: RhoGAP_chimaerin
description: Chimaerin, RhoGAP domain

phrase: EFHGIISREQADELLGGVEGAYILRESQRQPGCYTLALRFGNQTLNYRLFHDGKHFVGEKRFESIHDL
type: DOMAIN
name: SH2
description: SH2 domain

phrase: HNFKVHTFRGPHWCEYCANFMWGLIAQGVRCSDCGLNVHKQCSKHVPND
type: DOMAIN
name: PE/DAG-bd
description: Protein kinase C-like, phorbol ester/diacylglycerol-binding domain

phrase: GREFHGIISREQADELLGGVEGAYILRESQRQPGCYTLALRFGNQTLNYRLFHDGKHFVGEKRFESIHDLVTDGLITLY
type: DOMAIN
name: SH2
description: SH2 domain

phrase: EKTHNFKVHTFRGP
type: DOMAIN
name: DAG/PE-bd
description: Diacylglycerol/phorbol-ester binding

phrase: CEYCANFMW
type: DOMAIN
name: DAG/PE-bd
description: Diacylglycerol/phorbol-ester binding

phrase: QGVRCSDCGLN
type: DOMAIN
name: DAG/PE-bd
description: Diacylglycerol/phorbol-ester binding

phrase: HKQCSKHVPNDC
type: DOMAIN
name: DAG/PE-bd
description: Diacylglycerol/phorbol-ester binding

phrase: TQRPMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRDGEKADISANVYPDINIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEVLMLLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLMRPPEDSTLTTLHDMRYQKLIVQILIENE
type: DOMAIN
name: RhoGAP_dom
description: Rho GTPase-activating protein domain

phrase: PMVVDICIREIEARGLKSEGLYRVSGFTEHIEDVKMAFDRDGEKADISANVYPDINIITGALKLYFRDLPIPVITYDTYSKFIDAAKISNADERLEAVHEVLMLLPPAHYETLRYLMIHLKKVTMNEKDNFMNAENLGIVFGPTLMRP
type: DOMAIN
name: RhoGAP_dom
description: Rho GTPase-activating protein domain

phrase: THNFKVHTFRGPHWCEYCANFMWGLIAQGVRCSDCGLNVHKQCSKHVPND
type: DOMAIN
name: PE/DAG-bd
description: Protein kinase C-like, phorbol ester/diacylglycerol-binding domain

phrase: RPKYYGREFHGIISREQADELLGGVEGAYILRESQRQPGCYTLALRFGNQTLNYRLFHDGKHFVGEKRFESIHDLVTDGLITLYIE
type: DOMAIN
name: Chimaerin_SH2
description: Chimaerin, SH2 domain
Protein sequence:
MTPPTAAVVVVAAGSGTRLGRERPKAYVDCAGTTILERSLRTVLLLAEPVQIVVVAPAALVDETVELARAAGAADGSVVVVAGGSTRQESVARGLAMLSPGIETVLVHDAARALTPLGQFERVIAAVRATGGGVVPGLPVTDTIKRIGADRAVLDTVDRSLLAAVQTPQGFPRVLLDEAYAGAEEEFTDDAALLASRGGASVVVDGDPLAFKITTAWDLARAEQLLAPPPAVLVPRVGIGTDVHAFDDGSPLWLAGLLWPGERGLSGHSDGDPVAHAICDALLAAAGLGDIGSRFGTSDPRFENAHGEVFLRATRELVEAAGFTIGNVAVQLIGNRPRFSPRREEAQVLLSSLLGAPVSVAATTSDSLGFTGRGEGVAATATALVLPSPAIPR

Annotated regions:
phrase: RVGIGTDVHAFDDGSPLWLAGLLWPGERGLSGHSDGDPVAHAICDALLAAAGLGDIGSRFGTSDPRFENAHGEVFLRATRELVEAAGFTIGNVAVQLIGNRPRFSPRREEAQVLLSSLLGAPVSVAATTSDSLGFTGRGEGVAATATAL
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RVGIGTDVHAFDDGSPLWLAGLLWPGERGLSGHSDGDPVAHAICDALLAAAGLGDIGSRFGTSDPRFENAHGEVFLRATRELVEAAGFTIGNVAVQLIGNRPRFSPRREEAQVLLSSLLGAPVSVAATTSDSLGFTGRGEGVAATATAL
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RVGIGTDVHAFDDGSPLWLAGLLWPGERGLSGHSDGDPVAHAICDALLAAAGLGDIGSRFGTSDPRFENAHGEVFLRATRELVEAAGFTIGNVAVQLIGNRPRFSPRREEAQVLLSSLLGAPVSVAATTSDSLGFTGRGEGVAATATAL
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: VLVHDAA
type: CONSERVED_SITE
name: ISPD_synthase_CS
description: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site

phrase: SDGDPVAHAICDALL
type: CONSERVED_SITE
name: MECDP_synthase_CS
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site

phrase: PRVGIGTDVHAFDDGSPLWLAGLLWPGERGLSGHSDGDPVAHAICDALLAAAGLGDIGSRFGTSDPRFENAHGEVFLRATRELVEAAGFTIGNVAVQLIGNRPRFSPRREEAQVLLSSLLGAPVSVAATTSDSLGFTGRGEGVAATATALVL
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: VLVPRVGIGTDVHAFDDGSPLWLAGLLWPGERGLSGHSDGDPVAHAICDALLAAAGLGDIGSRFGTSDPRFENAHGEVFLRATRELVEAAGFTIGNVAVQLIGNRPRFSPRREEAQVLLSSLLGAPVSVAATTSDSLGFTGRGEGVAATATALV
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Protein sequence:
MIGYLFGNRVLVDDKELPLIEAYYLLDKGELEVYEDDKKLSKEEFLKKCLTYDERFLIRYKAYKELRDKGYTLGTALKFGADFRVYDIGVIPKKGKRSEREHSKWVLYPVSKDETFDFYEFASKNRVAHSTRKKLLLGIVSDKIEFIEVSWKKP

Annotated regions:
phrase: RFLIRYKAYKELRDKGYTLGTALKFGADFRVYDIGVIPKKGKRSEREHSKWVLYPVSKDETFDFYEFASKNRVAHSTRKKLLLGIVSDKIEFIEVS
type: DOMAIN
name: tRNA_intron_Endonuc_cat-like
description: tRNA intron endonuclease, catalytic domain-like

phrase: ELPLIEAYYLLDKGELEVYEDDKKLSKEEF
type: DOMAIN
name: tRNA_intron_Endonuc_N
description: tRNA intron endonuclease, N-terminal

phrase: FLIRYKAYKELRDKGYTLGTALKFGADFRVYDIGVIPKKGKRSEREHSKWVLYPVSKDETFDFYEFASKNRVAHSTRKKLLLGIVSD
type: DOMAIN
name: tRNA_intron_Endonuc_cat-like
description: tRNA intron endonuclease, catalytic domain-like
Protein sequence:
MANWISSKLKAAETILQQLDQQAADSLRKDEKSETHDEVFETSPKSGSSPVSLKDQLRKKTYEGSDSGSGSQRNSTEQKPSYLSSSKKVRKPDQSHERTSAPSQSLTQDNTKLTDNDWTELLSTPNQRTSTSTSRSPGGTSAIRGLKKDGKRHGNLGKNPLVSDGKKSSSSNVVNSRGRPQKQTNKEPSDKEVSSPSDADMKNRNAPRDIFVNSTHKESEKDVSGKTPPLDDSRRSANETLPRETSPSVGKRDGRESRRSSVWGKQVREEVSQSNVSDGLTRKESSLSSDESESDYESDSSTDSERERQREERRRRRERVFAEKVATKAVAVIKERENMVARLEGEKLSLEKIVEERAKQQAQEAAELQTNMMETLEAADLEKQKHNNTRMEVLTRLAGLEAENAELTRSLAAGQKKLETQIDQVAVLKQQVELKESTLEELKRNTFNIGGRGTTLKQLDTSRGDKFEHQMLEAEISLLTDKIGRLQDKATKLEADIEMMRKELEEPTEVEIELKRRLNQLTDHLIQKQSQVEALSSEKATILFRIEAVSRLIEENKGMSATEASSQDLEAGDWELSGSKFKPAFQDKIRSGKKHLGWLVMQLNAIFISGTVFLRRNPTAKIWAVVYLVCLHLWVLYILLSHSDASSSGELRSGAVISLENFSNSSLQ

Annotated regions:
Protein sequence:
MAVVTLSEMMEAGAHFGHQTRRWNPKMQRYIHCARNGVHIIDLVQTAVCMNNAYKWVRSAARSGKRFLFVGTKKQAAEVVALEASRCGASYVNQRWLGGMLTNWSTMRARIERLKDLERMESSGAIAMRPKKEASVLRRELDRLQKYLGGLKNMRRLPDVVVLIDQKREYNAVLECQKLDIPVVSMLDTNCDPDLCDVPIPCNDDAVRSVQLIIGRLADAINEGRHGSNDQGDEG

Annotated regions:
phrase: LSEMMEAGAHF
type: CONSERVED_SITE
name: Ribosomal_uS2_CS
description: Small ribosomal subunit protein uS2, conserved site
Protein sequence:
MSIRLYKSYTPGTRNRALSVFDELTKTTPEKSLIRKNHRNKGRNNRGIITVRHRGGGHKRRYRLIDFKRNKYGVEGVIASIEYDPNRNARIALVNYTDGEKRYILQPKNLTVGDRILSGSGSPLNIGNTLPLNEIPLGSSIHNIELIPNRGGQIVRAGGTSAKILAKDGDYITLRLPSKEIRLVRKECFATIGEVSNNDAFLVQSGKAGRTRWLGKRPTVRGSVMNPCDHPHGGGEGRAPIGRTRPLTPWGKPALGMKTRKRKKLSDAYILRRRS

Annotated regions:
phrase: IGNTLPLNEIPLGSSIHNIELIPNRGGQIVRAGGTSAKILAKDGDYITLRLPSKEIRLVRKECFATIGEVSNNDAFLVQSGKAGRTRWLGKRPTVRGSVMNPCDHPHGGGEGRAPIGRTRPLTPW
type: DOMAIN
name: Ribosomal_uL2_C
description: Large ribosomal subunit protein uL2, C-terminal

phrase: LNIGNTLPLNEIPLGSSIHNIELIPNRGGQIVRAGGTSAKILAKDGDYITLRLPSKEIRLVRKECFATIGEVSNNDAFLVQSGKAGRTRWLGKRPTVRGSVMNPCDHPHGGGEGRAPIGRTRPLTPWGK
type: DOMAIN
name: Ribosomal_uL2_C
description: Large ribosomal subunit protein uL2, C-terminal

phrase: GRNNRGIITVRHRGGGHKRRYRLIDFKRNKYGVEGVIASIEYDPNRNARIALVNYTDGEKRYILQPKNLTVGDRI
type: DOMAIN
name: Ribosomal_uL2_RNA-bd_dom
description: Large ribosomal subunit protein uL2, RNA-binding domain

phrase: PTVRGSVMNPC
type: CONSERVED_SITE
name: Ribosomal_uL2_CS
description: Large ribosomal subunit protein uL2, conserved site
Protein sequence:
MFCVQCEQTIRTPVGNGCSYAQGMCGKTAETSDLQDLLVAVLQGLSAWALTARELGIVDHEIDSFAPRAFFSTLTNVNFDSDRIVGYAKEAILLRQSLAIRCRLIDSTITVDHPLAELQLDSDDIPTLQQQAQQFTLNNDKAEVGDDIHGLRMLCLYGLKGAAAYMEHAYVLGQFDEQIYAQYHAYMAWLGTQPRDVDTLLNNAMGIGKMNFNVMAILDRGETQAYGDPQPTSVNVRPVAGKAILISGHDLKDLQMLLEQTQGTGINIYTHGEMLPAHGYPELKRYSHLVGNYGSGWQNQQIEFAKFPGPILMTSNCIIDPNVGNYGDRIWTRSIVGWPGVNHLEGEDFTPVIEQALGMAGFPYNELEHLITVGFGRQTLLNAADTVIDLVATKKLRHVFLVGGCDGSRTERSYFTDFARSVPQDCIIMTLACGKYRFNKLDFGTLEGLPRLLDVGQCNDAYSAIMLAVKLSEKLGCTVNDLPLSLVLSWFEQKAIVILLTLLSLGVKNIYTGPTAPGFLTDNLMAILYEKFGMRPITTVEQDMKAILGH

Annotated regions: