nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTLEELVAAIDVIDRGGDQQVYLAGLHYDSRQVQPGFLFVAIKGFKTDGHLYINDALARGAVAVVLEEEVPLPPGVAWVRVGDSRRALGMLAARFYGYPSHRLRLIGVTGTNGKTTTTHLIQAVLEGAGRPTGLLGTIGNRLGDKVLPTAHTTPEALDLQALLHQLVNLGAQGVVMEVSSHALALHRVEGAEFDVAVFTNLTQDHLDFHRDMEDYFKVKARLFQALGKGVKGGPKYAVINGDDPYSARLITLTPVPVVTYGCSPECQVRARDINLTAGGATCRVTWPGGEVELNLKLTGRFNIYNALAAFTVAWREGLDPVAIVKTLGEVKGVPGRLEQVRQGQPFTVVVDYAHTPDGLENVLQAARQVTTGNLIVVFGCGGNRDRGKRPQMGKAAARLSDYCIITSDNPRDEDPEAIITDILPGVEEVPGARYQVVVDRRRAIAAALAQARPGDMVVIAGKGHETYQIVKGRTLPFDDRQVAREELAALGYTGEGSSC

Annotated regions:
phrase: GRLEQVRQGQPFTVVVDYAHTPDGLENVLQAARQVTTGNLIVVFGCGGNRDRGKRPQMGKAAARLSDYCIITSDNPRDEDPEAIITDILPGVEEVPGARYQVVVDRRRAIAAALAQARPGDMVVIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: GLHYDSRQVQPGFLFVAIKGFKTDGHLYINDALARGAVAVVLEEEVPLPPGVAWVRVGDSRRALGMLAARF
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: VTGTNGKTTTTHLIQAVLEGAGRPTGLLGTIGNRLGDKVLPTAHTTPEALDLQALLHQLVNLGAQGVVMEVSSHALALHRVEGAEFDVAVFTNLTQDHLDFHRDMEDYFKVKARLFQALGKGVKGGPKYAVINGDDPYSARLITLTPVPVVTYGCSPECQVRARDINLTAGGATCRVTWPGGEVELNLKLTGRFNIYNALAAFTV
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central
Protein sequence:
MENDQFLQKQHFLILGLAKSGYAAASILHEKGIYVAVNDQKPFEENEPAQKLSEKGIEVVCGEHPVSLFDQHQITILIKNPGIPYENIMVQEAEKRGIPVWTEIELAYYLTSAKFIGITGSNGKTTTTTLIYEMLKADSQKALIAGNIGTVASEVAYHADGDEWIVTELSSFQLMGTHAFRPEISLILNVFDAHLDYHHTRENYEKAKQKVYLHQTASDKAIVNQDDETVVRLAEAGKAEIVPFSVSKTLEQGAYVKDSMIMFNGEAILPLEEVVLPGAHNLENILAAIAVVKTAGASNEAVKKVLTSFTGVKHRLQYVTTVNGRKFYNDSKATNILATSKALSAFDKPVILLAGGLDRGNGFDDLKPYMKHVKAVLTFGQTAPKLEKLGNELGIQHVKRVDNVEQAVSAAFALSNEGDVILLSPACASWDQFKTFEERGDMFIDAVHMLK

Annotated regions:
phrase: ITGSNGKTTTTTLIYEMLKADSQKALIAGNIGTVASEVAYHADGDEWIVTELSSFQLMGTHAFRPEISLILNVFDAHLDYHHTRENYEKAKQKVYLHQTASDKAIVNQDDETVVRLAEAGKAEIVPFSVSKTLEQGAYVKDSMIMFNGEAILPLEEVVLPGAHNLENILAAIAV
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: HRLQYVTTVNGRKFYNDSKATNILATSKALSAFDKPVILLAGGLDRGNGFDDLKPYMKHVKAVLTFGQTAPKLEKLGNELGIQHVKRVDNVEQAVSAAFALSNEGDVILLSPA
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MDITRPIIALDLPSAEAALDFVGRFDGENLFVKVGMELFYAAGPSVVTSLKEAGHDVFCDLKLHDIPNTVKGAASSLSRLGADLLTVHAAGGRSMMEASLEGLGDAAETTRVIAITQLTSTSPEALKTEQLVDVPLVESVRNYAKLAQAAGLAGVVCSAHEAADIASVTGPNFLRVTPGIRPAGSAVGDQSRVATPGNAASMGSSAIVVGRPITKADDPVAAYHAIRDDWNAGRKA

Annotated regions:
phrase: RPIIALDLPSAEAALDFVGRFDGENLFVKVGMELFYAAGPSVVTSLKEAGHDVFCDLKLHDIPNTVKGAASSLSRLGADLLTVHAAGGRSMMEASLEGLGDAAETTRVIAITQLTSTSPEALKTEQLVDVPLVESVRNYAKLAQAAGLAGVVCSAHEAADIASVTGPNFLRVTPGIRPAGSAVGDQSRVATPGNAASMGSSAIVVGRPITKADDPVAAYHA
type: DOMAIN
name: OMPdeCOase_dom
description: Orotidine 5'-phosphate decarboxylase domain

phrase: VFCDLKLHDIPNT
type: ACTIVE_SITE
name: OMPdecase_AS
description: Orotidine 5'-phosphate decarboxylase, active site

phrase: RPIIALDLPSAEAALDFVGRFDGENLFVKVGMELFYAAGPSVVTSLKEAGHDVFCDLKLHDIPNTVKGAASSLSRLGADLLTVHAAGGRSMMEASLEGLGDAAETTRVIAITQLTSTSPEALKTEQLVDVPLVESVRNYAKLAQAAGLAGVVCSAHEAADIASVTGPNFLRVTPGIRPAGSAVGDQSRVATPGNAASMGSSAIVVGRPITKADDPVAAYHA
type: DOMAIN
name: OMPdeCOase_dom
description: Orotidine 5'-phosphate decarboxylase domain
Protein sequence:
MASALEQFVNSVRQLSAQGQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLFVKFSMPSVPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGIGILKQAIDKMQMNTNQLTSIHADLCQLCLLAKCFKPALPYLDVDMMDICKENGAYDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILLGKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKHSETFTRDNNMGLVKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKDGMVSFHDNPEKYNNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQFVQKSMGSQEDDSGNKPSSYS

Annotated regions:
phrase: NKHSETFTRDNNMGLVKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKDGMVSFH
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain

phrase: NFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILLGKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPSELRNLVNKHSETFTRDNNMGLVKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKDGMVSFHDNP
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain

phrase: NPAMLHNIDQEMLKCIELDERLKAMDQ
type: DOMAIN
name: CSN3_C
description: COP9 signalosome complex subunit 3, C-terminal helix

phrase: QGQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLFVKFSMPSVPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERKQPLRGIGILKQAIDKMQMNTNQLTSIHADLCQLCLLAKCFKPALPYLDVDMMDICKENGAYDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILLGKVQQLPKYTSQI
type: DOMAIN
name: COP9_N
description: COP9 signalosome complex subunit 3, N-terminal helical repeats

phrase: GLVKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKDGMVSFHDNPEKYNNPAMLHNIDQEMLK
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain
Protein sequence:
MDAARFIPEVQSVLERGGEPAYRLRQAYAALTGSLVRDWEEATSLPQGLRGALNQEAPAAVLDLRRTWRATDGTRKYLFHTHDGHAIETVMIPEKGRHTVCISTQVGCAMACKFCATGLLGIKRNLGAREIAEQVFVCARDISPERVSNVVVMGMGEPMLNYKATLGALKVLNDPKGFGLAARHIAVSTSGLVDKIRRFADEPEQFHLAISLHTPFEEERREIMPVAARHTIPELMDAARYFVSRTRRKLFFEYTLLAGVNDQPRHVEALAELFDHPLYHLNLLRFNWTDTGFSATSKADAKRFLNHARDLGLSATLRPSRGQDIDAACGQLAARDLRGRPAVPMV

Annotated regions:
phrase: ISTQVGCAMACKFCATGLLGIKRNLGAREIAEQVFVCARDISPERVSNVVVMGMGEPMLNYKATLGALKVLNDPKGFGLAARHIAVSTSGLVDKIRRFADEPEQFHLAISLHTPFEEERREIMPVAARHTIPELMDAARYFVSRTRRKLFFEYTLLAGVNDQ
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: EKGRHTVCISTQVGCAMACKFCATGLLGIKRNLGAREIAEQVFVCARDISPERVSNVVVMGMGEPMLNYKATLGALKVLNDPKGFGLAARHIAVSTSGLVDKIRRFADEPEQFHLAISLHTPFEEERREIMPVAARHTIPELMDAARYFVSRTRRKLFFEYTLLAGVNDQPRHVEALAELFDHPLYHLNLLRFNWTDTGFSATSKADAKRFLNHARDLGL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: EVQSVLERGGEPAYRLRQAYAALTGSLVRDWEEATSLPQGLRGALNQEAPAAVLDLRRTWRATDGTRKYLFHTHDGHAIETVMIPEKGRHTVCISTQVGCAMACKFCATGLLGIKRNLGAREIAEQVFVCARDISPERVSNVVVMGMGEPMLNYKATLGALKVLNDPKGFGLAARHIAVSTSGLVDKIRRFADEPEQFHLAISLHTPFEEERREIMPVAARHTIPELMDAARYFVSRTRRKLFFEYTLLAGVNDQPRHVEALAELFDHPLYHLNLLRFNWTDTGFSATSKADAKRFLNHARDLGLSATLRPSRGQDIDAACGQLAARD
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MLEHIEKELLEHQKTFEKVWEELRFHIYTASIICIEALKNQKKIMLCGNGGSAADAQHIAAELVGRFKKERRSLPAIALSVDTSALTAIGNDYGFELVFARQVEGLAQKGDVLIGISTSGESENVLRAMEEAKKRGCKTIGLLGKDGGRIKDLCDAAIVVPSSQTPRIQEMHIMIGHILCSLIDESF

Annotated regions:
phrase: CIEALKNQKKIMLCGNGGSAADAQHIAAELVGRFKKERRSLPAIALSVDTSALTAIGNDYGFELVFARQVEGLAQKGDVLIGISTSGESENVLRAMEEAKKRGCKTIGLLGKDGGRIKDLCDAAIVVPSSQTPRIQEMHIMIGHILCSLIDES
type: DOMAIN
name: SIS_dom
description: SIS domain

phrase: QKTFEKVWEELRFHIYTASIICIEALKNQKKIMLCGNGGSAADAQHIAAELVGRFKKERRSLPAIALSVDTSALTAIGNDYGFELVFARQVEGLAQKGDVLIGISTSGESENVLRAMEEAKKRGCKTIGLL
type: DOMAIN
name: SIS_dom
description: SIS domain
Protein sequence:
MQITIATLNQGKLREIRALLNEPQFEILGVEKEFVFPEETGDTYLENAMIKAKAVAEFSHTLAIGEDAGLEVEVLPHLLGVKTARVLDGSDQEKMQYVLDQMKNESNRGARFVCVCAIYDPIKNESQSFFGEVRGSIATEMRGSDGFGFDPIFIPKENNSDQKTFAELGSAFKNEISHRARAWGQVKKFLQLQS

Annotated regions:
Protein sequence:
MSRTLALARLLPDIADVGDIAVSGLVLDSRDVRPGDAFVCVAGFGAHGLNFVQQARANGAVAILYDHPAPEGIAVPADAIAVPGLRARMGALADQFHGQPSRSMTMVGVTGTNGKTSTVQLLGQAWQRLGITSGSIGTLGVGLYGQVVPTGFTTPLVLQMHQVLAQLRDAGATATAMEVSSHALDQGRVDAVHYDIAVFTNLTRDHLDYHGSMDAYGAAKARLFQRPGLKAAVINLDDAYAPTLLALLDPAVAVVGVSSRGAASARLQAADIVMDSAGLHFQLRADGQQAAVDSPLLGRFNVDNLLAVAGVLLAQGQPLAVIASLLGQLRPISGRMNKLGGQAGQPTVVVDYAHTPDALLQALSSLEDHVDGLLACVFGCGGDRDAGKRPQMAAIAEAHADRVIVTDDNPRSEDGDAIVADILAGFARPETVAVQRDRALAIDSAIATASAGDVVLIAGKGHEPYQEINGVKHPFDDSQVAQQCLDLHFSTYHGERP

Annotated regions:
phrase: VTGTNGKTSTVQLLGQAWQRLGITSGSIGTLGVGLYGQVVPTGFTTPLVLQMHQVLAQLRDAGATATAMEVSSHALDQGRVDAVHYDIAVFTNLTRDHLDYHGSMDAYGAAKARLFQRPGLKAAVINLDDAYAPTLLALLDPAVAVVGVSSRGAASARLQAADIVMDSAGLHFQLRADGQQAAVDSPLLGRFNVDNLLAVAG
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: VSGLVLDSRDVRPGDAFVCVAGFGAHGLNFVQQARANGAVAILYDHPAPEGIAVPADAIAVPGLRARMGALADQF
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: GRMNKLGGQAGQPTVVVDYAHTPDALLQALSSLEDHVDGLLACVFGCGGDRDAGKRPQMAAIAEAHADRVIVTDDNPRSEDGDAIVADILAGFARPETVAVQRDRALAIDSAIATASAGDVVLIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MKVAVVGATGLVGGVMFEVLKEHDFPITELLPVASERSVGKQIEYRGKSYTVVSLQDAVDARCDVAIFSAGGSTSLEWAPKFAAVGTVVIDNSSAWRMDPDKKLVVPEVNADELTANDLIIANPNCSTIQMVVALAPLHRAFKIKRLVISTYQSFTGTGVKAVRQYEAERDGGKSEDPAYHYPIYENCIPHCDVFLDNDYTKEEMKLVHETRKILGEPKLAVTATAVRVPVHGGHSESVNVEFEHPFTVEKVRELLAQVPGVVVQDDPRSNIYPMPLLAKHRDEVFVGRIRRDESIENGLNLWIVADNLRKGAATNAVQIAEYLLENNLIGQRITA

Annotated regions:
phrase: KVAVVGATGLVGGVMFEVLKEHDFPITELLPVASERSVGKQIEYRGKSYTVVSLQDAVDARCDVAIFSAGGSTSLEWAPKFAAVGTVVIDNSSAWRMDPDKKLVVPEVNADEL
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: KVAVVGATGLVGGVMFEVLKEHDFPITELLPVASERSVGKQIEYRGKSYTVVSLQDAVDARCDVAIFSAGGSTSLEWAPKFAAVGTVVIDNSSAWRMDPDKKLVVPEVNADELTA
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: LAPLHRAFKIKRLVISTYQSFTGTGVKAVRQYEAERDGGKSEDPAYHYPIYENCIPHCDVFLDNDYTKEEMKLVHETRKILGEPKLAVTATAVRVPVHGGHSESVNVEFEHPFTVEKVRELLAQVPGVVVQDDPRSNIYPMPLLAKHRDEVFVGRIRRDESIENGLNLWIVADNLR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain
Protein sequence:
MKLSSKDYAAAQDVADELAGFRDEFYIQPESIYLDGNSLGLLSKRAEASLLDLLGSWKQLGIDGWTEGKNPWYYMAGRLGEKMAPLVGAEPEEVMVTGSTTANLHQMLATFYRPEGSRTKILADELNFPSDLYAIKSQIKLRGLDPQEHLVSVKSRDGHTLSEDDIITAMTGEVAVAVLPGVLYRSGQILDMERLTAAAHERGILIGFDLCHSIGSVPHALHDWNTDFAFWCTYKHLNGGPGSSGGLFVNRRLFGTEPGLAGWFGSDKEKQFDMDHVMTPAGDAAAYQVGTPNILSAAPVIGSLELFEEAGIGRIREKSLRLTDYLIGLVGELLTGYGFSIASPAGHAQRGGHVYLEHDEAARICRALKEEGVIPDFRAPKGIRLAPVALYNSFEEVRRAMLILRDIMKEERYTKFENRRGIIA

Annotated regions:
Protein sequence:
MLIALLIILAYVIGSIPSGLIVGKLAKGIDIREHGSGNLGATNAFRTLGVKAGSVVIAADILKGTLAAALPYLLHVPIHPLLAGVAAVIGHVFPVFAKFKGGKAVATSGGVLLFYAPLLFVTMVAVFFVFLFLTKFVSLSSMLTGIYTIIYCLFVKDPYLLVVVTLLTAFVIYRHRANIKRIINKTEPKIKWF

Annotated regions:
Protein sequence:
MKRDVRILLLGEPKVGKTSLIMSLVGEEFPEQVPLRAEEITIPADVTPEKVPTHIVDYSENEQTDEVLREEIVKANVVCVVYDVTQEETIDKIRTKWIPLVNGGAEKGSKIPIILVGNKSDLRSGSSMETILPIMNQFSEIETCVECSAKNLKNISELFYYAQKAVLHPTAPLYDPEDKQLKAQCVRALSRIFSISDQDNDHILSDAELNCFQKLCFGNPLAPQALEDVKTVVWKNTSDGVQDNGLTLNGFLFLNTLFIQRGRHETTWTILRKFGYDDTLELTDDYLYPVLRVSVGCTTELNHLGHQFLLKLFEKYDEDKDSALSPAELKNLFSVLPYMPWSSTVYSNIPLTDDCYISQHGYLCQWMLLAYLDVHRCLEHLGYLGYPILMEQECQTSAITVTREKALDLDNRQTQRTVFLCKVIGPRGTGKTDFLRAFLQRSTERSDRDPGAPSIYAINTVSIANQDKYLILEEVDVETEFLKAADAACDVACLMYDVSDPDSFNYCASIYKQHYMDSGIPCVVLGSKADLVEVKQHHGMSPSEFCYKHRLPSPLHFSALLTHTHTHIYSKLTWAAMYPHLNGSDMSSTSFWLRVTLGATIAAMLGFALYRAFSRHK

Annotated regions:
phrase: RDVRILLLGEPKVGKTSLIMSLVGEEFPEQVPLRAEEITIPADVTPEKVPTHIVDYSENEQTDEVLREEIVKANVVCVVYDVTQEETIDKIRTKWIPLVNGGAEKGSKIPIILVGNKSDLRSGSSMETILPIMNQFSEIETCVECSAKNLKNISELFYY
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: RTVFLCKVIGPRGTGKTDFLRAFLQRSTERSDRDPGAPSIYAINTVSIANQDKYLILEEVDVETEFLKAADAACDVACLMYDVSDPDSFNYCASIYKQHYMDSGIPCVVLGSKADLVEVKQHHGMSPSEFCYKHRLPSPLHFSALLTHTHTHIYSKLTWAAM
type: DOMAIN
name: MIRO_dom
description: MIRO domain

phrase: WSSTVYSNIPLTDDCYISQHGYLCQWMLLAYLDVHRCLEHLGYLGYPILMEQECQTSAITVTREKALDLDNR
type: DOMAIN
name: EF_hand_assoc_1
description: Mitochondrial Rho GTPase 1/3, EF hand associated, type-1

phrase: DQDNDHILSDAE
type: BINDING_SITE
name: EF_Hand_1_Ca_BS
description: EF-Hand 1, calcium-binding site

phrase: PLAPQALEDVKTVVWKNTSDGVQDNGLTLNGFLFLNTLFIQRGRHETTWTILRKFGYDDTLELTDDYLYPVLRVSVGCTTELNHL
type: DOMAIN
name: EF_hand_assoc_2
description: EF hand associated, type-2

phrase: LGHQFLLKLFEKYDEDKDSALSPAELKNLFSVLPY
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: KRDVRILLLGEPKVGKTSLIMSLVGEEFPEQVPLRAEEITIPADVTPEKVPTHIVDYSENEQTDEVLREEIVKANVVCVVYDVTQEETIDKIRTKWIPLVNGGAEKGSKIPIILVGNKSDLRSGSSMETILPIMNQFSEIETCVECSAKNLKNISELFYYAQKAVL
type: DOMAIN
name: MIRO_dom
description: MIRO domain
Protein sequence:
MKLSDLLKDVKTRFASGLAVTGDVEVAGITADSRKVEPGFVFVALPGLTVNGADFIGDALTKGAVAVLCVPSARLQDDGVVWITHEVPGRVFPHMVAAYFQRQPEHLAAVTGTNGKTSVASFTKQIWEHMGLKAASVGTLGVVAPGHNDYTGMTTPDPVTLHKAMSDLCDLGIDHVVFEASSHGLAQYRMDGLNISAAAFTNLTRDHYDYHGSEENYFYAKSRLFGEVMKPGSTAVLNADCPIVREVADICWARGHKVITVGRHDGDIRLLHQVSSPTGQEITVSYEGRLYDIKLSLVGSFQAMNALMAVGLVIGCGGDADQAFNSLAYLKSVEGRMEQAGRHPSGARIYVDYAHTPDALETALEALQPHVRGKLAVVFGCGGDRDTGKREQMGRIACEKAARVYVTDDNPRSEEPAAIRAEILKGCPGATEVGDRAEAIRLAVAELGEGDLLLVAGKGHERGQEIAGKVYEFDDVSEVRSAIAGLPSEKQGRGATPGGVRS

Annotated regions:
phrase: VAGITADSRKVEPGFVFVALPGLTVNGADFIGDALTKGAVAVLCVPSARLQDDGVV
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: GRMEQAGRHPSGARIYVDYAHTPDALETALEALQPHVRGKLAVVFGCGGDRDTGKREQMGRIACEKAARVYVTDDNPRSEEPAAIRAEILKGCPGATEVGDRAEAIRLAVAELGEGDLLLVAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: VTGTNGKTSVASFTKQIWEHMGLKAASVGTLGVVAPGHNDYTGMTTPDPVTLHKAMSDLCDLGIDHVVFEASSHGLAQYRMDGLNISAAAFTNLTRDHYDYHGSEENYFYAKSRLFGEVMKPGSTAVLNADCPIVREVADICWARGHKVITVGRHDGDIRLLHQVSSPTGQEITVSYEGRLYDIKLSLVGSFQAMNALMAVG
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central
Protein sequence:
MPNDPSDMNNELHNENTIRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDGRYSALDILQVTGLVNYFGRVPENDNIVVSPILLQKGFTKLALYGISNVRDERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTPTSYLPESFIQDFYDFVLWGHEHECLIDGSYNPTQKFTVVQPGSTIATSLSPGETAPKHCGILNITGKDFHLEKIRLRTVRPFIMKDIILSEVSSIPPMVENKKEVLTYLISKVEEAITEANAQWYEAQGTVPVVENEKPPLPLIRLRVDYTGGYQTENPQRFSNRFVGRVANATDVVQFYLKKKYTRSKRNDGLYTSAVEDIKINSLRVESLVNEYLKTNRLECLPEDSLGEAVVNFVEKDDRDAIKECVETQLNKQINLLVKKRVTEENLEQEISSIINDLPKISTTKRKDYEELPEEVSETSINIAEHTPVLKHTSSLLDHHSPLATSSSEHEMEATPSPALLKKTNKRRELPSSLTKKNTRTPQRSKEVKKVPARKLSQSTKKSDKNTQSTLLFYDPSSTTEAQYLDNEDDEILDD

Annotated regions:
phrase: FHLEKIRLRTVRPFIMKDIILSEVSSIPPMVENKKEVLTYLISKVEEAITEANAQWYEAQGTVPVVENEKPPLPLIRLRVDYTGGYQTENPQRFSNRFVGRVANATDVVQFYLKKKYTRSKRNDGLYTSAVEDIKINSLRVESLVNEYLKTNRLECLPEDSLGEAVVN
type: DOMAIN
name: Mre11_DNA-bd
description: Mre11, DNA-binding

phrase: RILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDGRYSALDILQVTGLVNYFGRVPENDNIVVSPILLQKGFTKLALYGISNVRDERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTPTSYLPESFIQDFYDFVLWGHEHECLIDGSYNPTQKFTVVQPGSTIATSL
type: DOMAIN
name: Mre11_N
description: DNA double-strand break repair protein Mre11, N-terminal metallophosphatase domain

phrase: FHLEKIRLRTVRPFIMKDIILSEVSSIPPMVENKKEVLTYLISKVEEAITEANAQWYEAQGTVPVVENEKPPLPLIRLRVDYTGGYQTENPQRFSNRFVGRVANATDVVQFYLKKKYTRSKRNDGLYTSAVEDIKINSLRVESLVNEYLKTNRLECLPEDSLGEAVVN
type: DOMAIN
name: Mre11_DNA-bd
description: Mre11, DNA-binding

phrase: IRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARERDVDMILLGGDIFHDNKPSRKALYQALRSLRLNCLGDKPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPSGDGRYSALDILQVTGLVNYFGRVPENDNIVVSPILLQKGFTKLALYGISNVRDERLYHSFRENKVKFLRPDLYRDEWFNLLTVHQNHSAHTPTSYLPESFIQDFYDFVLWGHEHE
type: DOMAIN
name: Calcineurin-like_PHP_ApaH
description: Calcineurin-like phosphoesterase domain, ApaH type
Protein sequence:
MEGAKRADANLLTDTGTESSPRSPVCSLRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVKVSKEIFNKATLEVILRPKIGLPGVAEKSRERLVRNTCEAVVLGALHPRTSITVVLQVVSDAGSLLACCLNAACMALVDAGVPMRALFCGVTCALDSDGNLVLDPTTKQEKEARAILTFALDSAEQKLLMSTTKGLYSDAELQQCLAAAQAASQHIFRFYRESLQRRYSKS

Annotated regions:
phrase: LFCGVTCALDSDGNLVLDPTTKQEKEARAILTFALDSAEQKLLMSTTKGLYSDAELQQCLAAAQ
type: DOMAIN
name: ExoRNase_PH_dom2
description: Exoribonuclease, phosphorolytic domain 2

phrase: LRHFACEQNLLSRPDGSASFLQGDTSVLAGVYGPAEVKVSKEIFNKATLEVILRPKIGLPGVAEKSRERLVRNTCEAVVLGALHPRTSITVVLQVVSDAGSLLACCLNAACMALVDAGV
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1
Protein sequence:
MHEGKITQIIGPVVDVDFVDGQLPSIMDALIVERPDGTELVLETQQHLGEERVRTIAMEATEGLVRGMKVVNTKNPIQTPVGENVLGRMLNVVGKPIDGLGEVHATKTYSIHRPSPAFDELSTKAEMFETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVLIMELINNIAKQQSGYSVFAGVGERTREGNDLWEEMKESGVIDKTALVFGQMNEPPGARARVALTALSIAEYFRDEENRDVLLFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERIVSTKKGSITSVQAIYVPADDLTDPAPATTFTHLDATTVLSRSIAELGIYPAVDPLDSTSRILDPNIIGRDHYDTAQAVKQILQRYKDLQDIIAILGMDELSDEDKLLVARARKVQRFLSQPFFVAEQFTGLEGKYVRLEDTIKAFKEIIEGRHDSLPENAFYLVGTIEDAIKKAKQLQNA

Annotated regions:
phrase: PAVDPLDST
type: ACTIVE_SITE
name: ATPase_a/bsu_AS
description: ATPase, alpha/beta subunit, nucleotide-binding domain, active site

phrase: RGGKTGLFGGAGVGKTVLIMELINNIAKQQSGYSVFAGVGERTREGNDLWEEMKESGVIDKTALVFGQMNEPPGARARVALTALSIAEYFRDEENRDVLLFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERIVSTKKGSITSVQAIYVPADDLTDPAPATTFTHLDATTVLSRSIAELGIYPAVDPLDSTSRILDPNIIGRDHYDTAQAVKQI
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: NIIGRDHYDTAQAVKQILQRYKDLQDIIAILGMDELSDEDKLLVARARKVQRFLSQPFFVAEQFTGLEGKYVRLEDTIKAFKEIIE
type: DOMAIN
name: ATP-synt_VA_C
description: ATP synthase A/B type, C-terminal domain

phrase: ITQIIGPVVDVDFVDGQLPSIMDALIVERPDGTELVLETQQHLGEERVRTIAMEATEGLVRGMKVVN
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_N
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain

phrase: GIKVIDLLEPYSRGGKTGLFGGAGVGKTVLIMELINNIAKQQSGYSVFAGVGERTREGNDLWEEMKESGVIDKTALVFGQMNEPPGARARVALTALSIAEYFRDEENRDVLLFVDNIFRFTQAGSEVSALLGRMPSAVGYQPTLATEMGALQERIVSTKKGSITSVQAIYVPADDLTDPAPATTFTHLDATTVLSRSIAELGIYPAVDPLDST
type: DOMAIN
name: ATPase_F1/V1/A1_a/bsu_nucl-bd
description: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain
Protein sequence:
MKLERLLAMVVLLISKKQVQAAELAELFEVSVRTIYRDIETINRAGIPIVTSQGSGGGIGIMETYRLEREWLKEEELFAIASALQSVSSMYEPVSHSTAYQKIKHLIPEQSTQAFKHQTEKWFIDMTAWGHTEDQKTLREKISAAIDRLLTISFTYTSASGETLLRETEPYTLVCKAGHWYLYAYCLVRNDFRFFKLNRMKDLAILHQTFIRKDIQLDTLPWDKSWYQKDRLTELVILVQPSARQRIGEWFGYDVLHCCEEDEICQAVISLPEDQWLIGFLLQFGKDIEVLQPLHIRDKVKETIHHMQKIYET

Annotated regions:
phrase: RLLAMVVLLISKKQVQAAELAELFEVSVRTIYRDIETINRAGIPIVTSQGS
type: DOMAIN
name: HTH_11
description: Helix-turn-helix, type 11

phrase: EKISAAIDRLLTISFTYTSASGETLLRETEPYTLVCKAGHWYLYAYCLVRNDFRFFKLNRMKDLAILHQTFIRKDIQLDTLPWDKSWYQKDRLTELVILVQPSARQRIGEWFGYDVLHCCEEDEICQAVISLPEDQWLIGFLLQFGKDIEVLQPLHIRDKVKETIHH
type: DOMAIN
name: WYL_dom
description: WYL domain

phrase: KLERLLAMVVLLISKKQVQAAELAELFEVSVRTIYRDIETINRAGIPIVTSQGSG
type: DOMAIN
name: DeoR_HTH
description: DeoR-type HTH domain
Protein sequence:
MIGRLVGKLAENHPPFVLLDVNGVGYEVEVPLSALGYLPKLGESCSLFTHFVVREDAQLLYGFIRREDRELFRLLLKVNGVGPKMAVAILSHMSPNEFVECVRGDNLTRLTKMPGVGKKTAERLLIEMRDRIKDWGAGDRETATPELLSQAVGGHSHLEEAEAALLALGYKPQEASRAINAVNKDGMGRDELIRLALKGMVKTK

Annotated regions:
phrase: RLLLKVNGVGPKMAVAILS
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: TRLTKMPGVGKKTAERLLI
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: HLEEAEAALLALGYKPQEASRAINAVNKDGMGRDELIRLALKG
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal

phrase: MIGRLVGKLAENHPPFVLLDVNGVGYEVEVPLSALGYLPKLGESCSLFTHFVVREDAQLLY
type: DOMAIN
name: DNA_helicase_Holl-junc_RuvA_I
description: DNA helicase, Holliday junction RuvA type, domain I, bacterial

phrase: GYKPQEASRAINAVNKDGMGRDELIRLAL
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal
Protein sequence:
MRVKGIRKSYQHLWKWGTMLLGMLMICSATQLWVTVYYGVPVWKEANTTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIVLENVTENFNMWKNNMVEQMQEDIINLWDQSLKPCVELTPLCVTLNCIDWRGNDTNTTDTNVNNTSHTNSSIGKITEEGEIKNCSFNTTTSTRDRYQKEYALFYKLDIEPIDDDNTRYNTSSNTSYRLISCNTSVITQACPKVSFEPIPIHYCTPAGFAILKCNDKKFNGTGPCKNVSTVQCTHGIKPVVSTQLLLNGSLAEEGIVIRSENFSNNAKIIIVQLNESVAINCTRPHNNTRRSIHMGPGRALFATGDITGDIRQAHCNISGTEWNKTLNRIRTKLKEQFNSTIVFNQSSGGDPEIVMHSFNCGGEFFYCNTTQLFNDSIWNGTRTKEQNENETITLPCRIKQIINMWQKVGKAMYAPPIRGQIKCSSNITGLLLTRDGGTQSNGTQGNETEIFRPAGGDMRDNWRSELYKYKVVQIEPVGVAPTKAKRRVVQREKRAVGTIGAMFLGFLGAAGSTMGAASITLTAQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGLWGCSGKLICPTAVPWNTSWSNKNLSAIWDNMTWMEWEREIDNYTKTIYNLIEESQNQQEKNEQELLELDQWASLWNWFEITKWLWYIKIFIMIVGGLVGLRIIFTVLSIVNRVRQGYSPLSFQTRLPTPGGPDRPEGIEEGGGERDSDRSSPLVHGF

Annotated regions:
phrase: LWVTVYYGVPVWKEANTTLFCASDAKAYETEKHNVWATHACVPTDPNPQEIVLENVTENFNMWKNNMVEQMQEDIINLWDQSLKPCVELTPLCVTLNCIDWRGNDTNTTDTNVNNTSHTNSSIGKITEEGEIKNCSFNTTTSTRDRYQKEYALFYKLDIEPIDDDNTRYNTSSNTSYRLISCNTSVITQACPKVSFEPIPIHYCTPAGFAILKCNDKKFNGTGPCKNVSTVQCTHGIKPVVSTQLLLNGSLAEEGIVIRSENFSNNAKIIIVQLNESVAINCTRPHNNTRRSIHMGPGRALFATGDITGDIRQAHCNISGTEWNKTLNRIRTKLKEQFNSTIVFNQSSGGDPEIVMHSFNCGGEFFYCNTTQLFNDSIWNGTRTKEQNENETITLPCRIKQIINMWQKVGKAMYAPPIRGQIKCSSNITGLLLTRDGGTQSNGTQGNETEIFRPAGGDMRDNWRSELYKYKVVQIEPVGVAPTKAKRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: AQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGLWGCSGKLICPTAVPWNTSWSNKNLSAIWDNMTWMEWEREIDNYTKTIYNLIEESQNQQEKNEQELLELD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASITLTAQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQQLLGLWGCSGKLICPTAVPWNTSWSNKNLSAIWDNMTWMEWEREIDNYTKTIYNLIEESQNQQEKNEQELLELDQWASLWNWFEITKWLWYIKIFIMIVGGLVGLRIIFTVLSIVNRVRQGYSPLSFQ
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MNYIGAHVSSSGGLEKAVFRAFQIKATTFSFFTKNQRQWISLPLQKKNIEDFKKACIKYNFSPEKILPHSSYLINLGHPIDFFLEKSRVAFIDEIVRCDQLGLRFLNFHPGSHLNKISEVTCLSRISESINIALEKTKNVVAVIENTAGQGTNIGYRFEHLYEIIKKIDDKSRIGVCIDTCHLFASGYDLRTKIDYESTFNKFFDLIEMKYLKGFHLNDSKKQFNSRVDRHENLGLGEIGKSVFKWIIKNKNFHNIPMILETINPKLWEKEIDWLRSLQ

Annotated regions:
phrase: FHLNDSKKQFNSRVDR
type: BINDING_SITE
name: AP_endonuc_F2_Zn_BS
description: AP endonuclease 2, zinc binding site

phrase: GVCIDTC
type: BINDING_SITE
name: AP_endonuc_F2_Zn_BS
description: AP endonuclease 2, zinc binding site

phrase: HSSYLINL
type: BINDING_SITE
name: AP_endonuc_F2_Zn_BS
description: AP endonuclease 2, zinc binding site

phrase: QIKATTFSFFTKNQRQWISLPLQKKNIEDFKKACIKYNFSPEKILPHSSYLINLGHPIDFFLEKSRVAFIDEIVRCDQLGLRFLNFHPGSHLNKISEVTCLSRISESINIALEKTKNVVAVIENTAGQGTNIGYRFEHLYEIIKKIDDKSRIGVCIDTCHLFASGYDLRTKIDYESTFNKFFDLIEMKYLKGFHLNDSKKQFNSRVDRHENLGLGEIGKSVFKWIIKNKNFHNIPMILETINPKLWEKEIDWLRS
type: DOMAIN
name: Xyl_isomerase-like_TIM-brl
description: Xylose isomerase-like, TIM barrel domain
Protein sequence:
MEESITGLITSFGFSSPEAFIALLVVVLAVIGAVIVVITFRPLMEYYPYTYPNARVRAKIGKILNEKQIAELAESESLEEVQNFLRGHKDYAKFVDKYPIEQALDANLAESYDLLARIAPGDLKPTFDLMLDQWDIKNIKSVLIAREAKLNEEETRELLVPYGELKDDQDKLIEADSVQDLIVALEGTPYAKILEEALPDYNENKTLLTLESALDNYYYERLLVKSSSQADDNTRMLHSYIGTKVDIANIKIILRAKADNLTYDQIKPYVIDNGYQLRGWKLKEFMESEDMNSLLSSIESSEYGSIVADHIPEYNSTKSITVFDEALDSYERNMAKNIFRKKPFGVGPIVGFMNKKEIEIKNLKIIARSKRGSSIPSSEIKEMLL

Annotated regions:
Protein sequence:
MIGIGGSGMTGLAHLMVDLGFKVLGSDITDNTEIRQLRNRGVVISQGHEPEFLHANRPKLIVYSSAVRMDNPELAIASKLQIPIIRRAVLLAALAGSRRTVCVAGMHGKTTTSAMIAHSLDILNPESGFAIGAAVPQLGRHARVSSSDDAFFVVETDESDGTLSEFSPEQSILLNIDEEHLDYYENLDAICTEFVAFGKQTKGTLIYCADDPRLTDLFGNRPKSISYGFNPTSDYQVEAGAKGEFQVKRREQVLGQFKIELLGEKNISNAVAAIAFLHSNGYAVDEISHALRRFKGVNRRQQELFGDHSYRIFDDYGHHPREIEATISAIKEECSGRLLVAFQPHRFTRTKHLLSDFITCFKGADLLWVTEVYAASEAPMKDVNGRLLAQEISNNGQPAAYVATLDELRTKVSQXLRPGDVILFMGAGDITQVAHQLATDLDMKETPHATELRELLDSESKVLENEPMARRTTIGVGGAADIYIEPSSELDXANILRYAAAHELPVTLLGRGSNLLIQDDGIRGVVIXLKHKSFNFIEVSGDQIRCGAGARLNHIANAARDAGLAGMEFMEGIPGCLGGALRMNAGAWNGETFGRVVSVKFMTRDGHVKERPVNQMGAIYRSCPILGENIALEATLRGILSEKSIVQEKMDCLRKQRIKSQPHYRSAGCMFKNPEGSSAGQLVDECNLKGLQVGGARVSEKHGNFIINSGNASAADVIDLMEKVKSKVSELKGVKLQTEVQIIGEXFRFECFLTRTRLL

Annotated regions:
phrase: VAGMHGKTTTSAMIAHSLDILNPESGFAIGAAVPQLGRHARVSSSDDAFFVVETDESDGTLSEFSPEQSILLNIDEEHLDYYENLDAICTEFVAFGKQTKGTLIYCADDPRLTDLFGNRPKSISYGFNPTSDYQVEAGAKGEFQVKRREQVLGQFKIELLGEKNISNAVAAIA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: VGGAADIYIEPSSELDXANILRYAAAHELPVTLLGRGSNLLIQDDGIRGVVIXLKHKSFNFIEVSGDQIRCGAGARLNHIANAARDAGLAGMEFMEGIPGCLGGALRMNAGAWNGETFGRVVSVKFMTRDGHVKERPVNQMGAIYRSCPILGENIALEATLRGIL
type: DOMAIN
name: FAD-bd_PCMH
description: FAD-binding domain, PCMH-type

phrase: MIGIGGSGMTGLAHLMVDLGFKVLGSDITDNTEIRQLRNRGVVISQGHEPEFLHANRPKLIVYSSAVRMDNPELAIASKLQIPIIRRAVLLAALAG
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: LFGDHSYRIFDDYGHHPREIEATISAIKEECSGRLLVAFQPHRFTRTKHLLSDFITCFKGADLLWVTEVYAASEAPMKDVNGRLLAQEISNNGQPAAYVATLDELRTKVSQXLRPGDVILFMGA
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: VQEKMDCLRKQRIKSQPHYRSAGCMFKNPEGSSAGQLVDECNLKGLQVGGARVSEKHGNFIINSGNASAADVIDLMEKVKSKVSELKGVKLQTEVQI
type: DOMAIN
name: MurB_C
description: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal

phrase: DIYIEPSSELDXANILRYAAAHELPVTLLGRGSNLLIQDDGIRGVVIXLKHKSFNFIEVSGDQIRCGAGARLNHIANAARDAGLAGMEFMEGIPGCLGGALRMNAGAWNGETFGRVVSVKFMTRDGHV
type: DOMAIN
name: Oxid_FAD_bind_N
description: FAD linked oxidase, N-terminal