Protein sequence:
MGARASVLSGGELDRWEKIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELRSLYNTVATLYCVHQRIEIKDTKEALDKIEEEQNKSKKKAQQAAADTGHSSQVSQNYPIVQNIQGQMVHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQDLNTMLNTVGGHQAAMQMLKETINEEAAEWDRVHPVHAGPIAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIYKRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMTACQGVGGPGHKARVLAEAMSQVTNTATIMMQRGNFRNQRKMVKCFNCGKEGHTARNCRAPRKKGCWKCGKEGHQMKDCTERQANFLREDLAFLQGKAREFSSEQTRANSPTISSEQTRANSPTRRELQVWGRDNNSPSEAGADRQGTVSFNFPQITLWQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCTLNFPISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTEMEKEGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFKKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWETWWTEYWQATWIPEWEFVNTPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTELQAIYLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGIRKILFLDGIDKAQDEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKCQLKGEAMHGQVDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGSNFTSATVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDIIATDIQTKELQKQITKIQNFRVYYRDSRNPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIRDYGKQMAGDDCVASRQDED

Annotated regions:
phrase: GCWKCGKEGHQMKDCT
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: KCFNCGKEGHTARNCR
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: VTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLL
type: DOMAIN
name: Retropepsin-like_cat_dom
description: Retropepsin-like catalytic domain

phrase: KCFNCGKEGHTARNC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: KEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRN
type: DOMAIN
name: Peptidase_A2_cat
description: Peptidase A2A, retrovirus, catalytic

phrase: RASVLSGGELDRWEKI
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: RPGGKKKYKLKHIVWASR
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: ERFAVNPGLLETSEG
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: TGSEELRSLYNTVATLYCV
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: HQRIEIKDTKEAL
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: ALLDTGADDTV
type: ACTIVE_SITE
name: Aspartic_peptidase_AS
description: Aspartic peptidase, active site

phrase: GARASVLSGGELDRWEKIRLRPGGKKKYKLKHIVWASRELERFAVNPGLLETSEGCRQILGQLQPSLQTGSEELRSLYNTVATLYCVHQRIEIKDTKEALDKIEEEQNKSKKKAQQAAADTGHSSQVSQN
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: ETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTELQAIYLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAG
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: VQPIVLPEKDSWTVNDIQKLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEEAELE
type: DOMAIN
name: RVT_thumb
description: Reverse transcriptase thumb

phrase: IKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFKKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYE
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: WQRPLVTIKIGGQLKEALLDTGADDTVLEEMSLPGRWKPKMIGGIGGFIKVRQYDQILIEICGHKAIGTVLVGPTPVNIIGRNLLTQIGCT
type: DOMAIN
name: Retropepsins
description: Retropepsins

phrase: IVGAETFYVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTELQAIYLALQDSGLEVNIVTDSQYALGIIQAQPDKSESELVNQIIEQLIKKEKVYLAWVPAHKGIGGNEQVDKLVSAGI
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: DGIDKAQDEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKC
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: EGKISKIGPENPYNTPVFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFTIPSINNETPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFKKQNPDIVIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPDKKHQKEPPFLWMGYE
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: GCWKCGKEGHQMKDCT
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: KCFNCGKEGHTARNC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: AQDEHEKYHSNWRAMASDFNLPPVVAKEIVASCDKC
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: VYYRDSRNPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKI
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: VDCSPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGSNFTSATVKAACWWAGIKQEFGIPYNPQSQGVVESMNKELKKIIGQVRDQAEHLKTAVQMAVFIHNFKRKGGIGGYSAGERIVDI
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: CWKCGKEGHQMKDCT
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: SPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQETAYFLLKLAGRWPVKTIHTDNGSNFTSATVKAACWWAGIKQEFGIPYN
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: YYDPSKDLIAEIQKQGQGQWTYQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTESIVIWGKTPKFKLPIQKETWETWWTEYWQATWIPEWEFVN
type: DOMAIN
name: RVT_connect
description: Reverse transcriptase connection

phrase: FRVYYRDSRNPLWKGPAKLLWKGEGAVVIQDNSDIKVVPRRKAKIIR
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: MYSPTSILDIRQGPKEPFRDYVDRFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAATLEEMMT
type: DOMAIN
name: Gag_p24_C
description: Retroviral nucleocapsid Gag protein p24, C-terminal domain