nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MGELGEHRSRSSLLSIPVLDTKTSGGSEYRESDGSLDLQSTLFEDHWLQSSQATTERNTDDPEEEIPPEEMVGEELPEVSNLEDSLRRDLEVEVVGMSHLSINERTTPTTSSAKCRKKKNHRLLELAKPKFNWQCLKDRTGRCCKGHVWISPRKTNLQFCLYWPSVYWTERFIEDTTLTITVPEVSRRVEELSRPKRFYQEYYNNNRTTPIWPIPRSTLEYQASNRLKRLATPKIRNNIWSINMSEVSQVSRAAQMAVPTPRTLRLAKPRAPATLLEEWDPMPKPKPYVSDYNRLLQLATPKALSEKCVPDRSPQWEVLNVTKNAVASSRIISLAQPKIRKDLNEGYNPYYISPASLVAQASPRIYELAVPKHITKKV

Annotated regions:
phrase: NRLLQLATPKALSEKCVPDRSPQWEVLNVTKNAVASSRIISLAQP
type: REPEAT
name: THEG
description: Testicular haploid expressed repeat

phrase: WEVLNVTKNAVASSRIISLAQPKIRKDLNEGYNPYYISPASLVAQASPRIYELAVP
type: REPEAT
name: THEG
description: Testicular haploid expressed repeat

phrase: VSRRVEELSRPKRFYQEYYNN
type: REPEAT
name: THEG
description: Testicular haploid expressed repeat

phrase: WPIPRSTLEYQASNRLKRLATPKIRNNIWSINMSEVSQVSRAAQMAVPTPRTLRLAKP
type: REPEAT
name: THEG
description: Testicular haploid expressed repeat

phrase: TITVPEVSRRVEELSRPKR
type: REPEAT
name: THEG
description: Testicular haploid expressed repeat

phrase: PKPYVSDYNRLLQLATPKA
type: REPEAT
name: THEG
description: Testicular haploid expressed repeat

phrase: STLEYQASNRLKRLATPKI
type: REPEAT
name: THEG
description: Testicular haploid expressed repeat

phrase: AKCRKKKNHRLLELAKPKF
type: REPEAT
name: THEG
description: Testicular haploid expressed repeat

phrase: VTKNAVASSRIISLAQPKI
type: REPEAT
name: THEG
description: Testicular haploid expressed repeat

phrase: ASLVAQASPRIYELAVPKH
type: REPEAT
name: THEG
description: Testicular haploid expressed repeat

phrase: AAQMAVPTPRTLRLAKPRA
type: REPEAT
name: THEG
description: Testicular haploid expressed repeat
Protein sequence:
MFEARLIQGSILKKVLEALKDLINEACWDISSGGVNLQSMDSSHVSLVQLTLRSEGFDTYRCDRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMDLDVEQLGIPEQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGELGNGNIKLSQTSNVDKEEEAVSIEMNEPVQLTFALRYLNFFTKATPLSPTVTLSMSADVPLVVEYKIADMGHLKYYLAPKIEDEEGS

Annotated regions:
phrase: RCDRNLAMGVNLTSMSKI
type: CONSERVED_SITE
name: Pr_cel_nuc_antig_CS
description: Proliferating cell nuclear antigen, PCNA, conserved site

phrase: GIPEQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGELGNGNIKLSQTSNVDKEEEAVSIEMNEPVQLTFALRYLNFFTKATPLSPTVTLSMSADVPLVVEYKIADMGHLKYYLAP
type: DOMAIN
name: Pr_cel_nuc_antig_C
description: Proliferating cell nuclear antigen, PCNA, C-terminal

phrase: GVNLQSMDSSHVSLVQLTLRSEG
type: CONSERVED_SITE
name: Pr_cel_nuc_antig_CS
description: Proliferating cell nuclear antigen, PCNA, conserved site

phrase: MFEARLIQGSILKKVLEALKDLINEACWDISSGGVNLQSMDSSHVSLVQLTLRSEGFDTYRCDRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMDLDV
type: DOMAIN
name: Pr_cel_nuc_antig_N
description: Proliferating cell nuclear antigen, PCNA, N-terminal
Protein sequence:
MNENLFAPFMIPVMLGIPITTLIIILPSILFPAPNRLINNRTISIQQWLTKLTSKQLMSVHSPKGQTWSLMLISLFLFIASTNLLGMLPHSFTPTTQLSMNVGMAIPLWAGTVATGFRNKTKMSLAHLLPQGTPTFLIPMLVIIETISLFIQPVALAVRLTANITAGHLLMHLIGETTLVLMSTSLFTAIITFTILALLTILEFRVALIQAYVFTLLVSLYLHDNT

Annotated regions:
phrase: ALAVRLTAN
type: ACTIVE_SITE
name: ATP_synth_F0_asu_AS
description: ATP synthase, F0 complex, subunit A, active site
Protein sequence:
MNTQILILAISAFLCVRADKICLGHHAVSNGIKVDTLTEKGIEVVNATETVEQKNIPKICSKGKQTIDLGQCGLLGTTIGPPQCDQFLEFSANLIIERREGDDICYPGKFDNEETLRKILRKSGGIKKENMGFTYTGVRTNGETSACRRSRSSFYAEMKWLLSNTDNGVFPQMTKSYKNTKREPALIIWGIHHSGSTAEQTRLYGSGNKLITVWSSKYQQSFAPNPGPRPQINGQSGRIDFYWLMLDPNDTVTFSFNGAFIAPDRASFLRGKSLGIQSDAQLDNNCEGECYHIGGTIISNLPFQNINSRAIGKCPRYVKQKSLMLATGMKNVPENSTHKQLTHHMRKKRGLFGAIAGFIENGWEGLIDGWYGYRHQNAQGEGTAADYKSTQSAINQITGKLNRLIEKTNQQFELIDNEFNEIEKQIGNVINWTRDSIIEVWSYNAEFLVAVENQHTIDLTDSEMNKLYEKVRRQLRENAEEDGNGCFEIFHQCDNDCMASIRNNTYDHKKYRKEAIQNRIQIDAVKLSSGYKDIILWFSFGASCFLFLAIAMVLAFICIKNGNMRCTICI

Annotated regions:
Protein sequence:
MARTKQSARKTTGGKAPRKQLSAKSARKGVSPASSAGAKKSRYRPGSVALKEIRRYQKSTDFLIRRLPFQRACRSVVKECSNATDIRFQGPALASIQEALEVYLVGLFEDAMLCAYHAKRVTVFPKDISLVLKLRSRHVKSISD

Annotated regions:
phrase: SARKTTGGKAPRKQLSAKSARKGVSPASSAGAKKSRYRPGSVALKEIRRYQKSTDFLIRRLPFQRACRSVVKECSNATDIRFQGPALASIQEALEVYLVGLFEDAMLCAYHAKRVTVFPKDISLVLKL
type: DOMAIN
name: Histone_H2A/H2B/H3
description: Histone H2A/H2B/H3
Protein sequence:
MMLRTFTLLLLCIWLNPGMTSLAVESQPELWIESNYPQAPWENITLWCKSPSRVSSKFLLLKDNSQMTWIRPPYKTFQVSFFIGALTESNTGLYRCCYWKEKGWSKPSKILELEAPGQLPKPIFWIQAETPPLPGCNVNIFCHGWLQDLVFMLFKEGYTEPVDYQVPTGTMAIFSIDNLAPENEGVYICRTHIQMLPTLWSEPSNPLKLVVAGLYPKPTLTAHPGPILAPGESLSLRCQGPIYGMTFALMRLEDLKKSFYHKKPIKNEAYFYFQDLKIQDTGHYLCFYYDGSYRGSLLSDILKIWVTDTFPKTWLLVQPSPVIQMGQNVSLRCGGLMDGVGLALYKKGEEKPLQFLDASSNTGNNSFFLKNVTYRDAGIYSCHYYLTWKTSIKMATYNTVELMVVAWPSSVFKVGKTITLQCRVSHPVLEFSLEWEERTTFQKFSVDGDFLITDIEGQGTGTYSCSYRIEAHPNTWSHRSKPLKLVGPAGFLTWNSILNEAVRVSLTMQLASLLLLVVWIRWKCRRLRLREAWLLGTAQGVAMLFILMALLCCGLCNGALTEEIEIVMPTPKPELWAETNFPLAPWKNLTLWCRSPSGSTKEFVLLKDGTGWIATRPASEQVRAAFPLGALTHSHTGSYHCHSWEEMAVSEPSEALELVGTDILPKPVISASLPIRGQELQIRCKGWLEGLGFALYKKGEQEPVQQLGAVGREAFFTIQRMEDKDEGNYSCRTHTEMQPFKWSEPSEPLELVIKEMYPKPFFKTWASP

Annotated regions:
phrase: HPGPILAPGESLSLRCQGPIYGMTFALMRLEDLKKSFYHKKPIKNEAYFYFQDLKIQDTGHYLCFYYDGSYRGSLLSDILKIWV
type: DOMAIN
name: Ig_sub
description: Immunoglobulin domain subtype

phrase: QAETPPLPGCNVNIFCHGWLQDLVFMLFKEGYTEPVDYQVPTGTMAIFSIDNLAPENEGVYICRTHIQMLPTLWSEPSNPLKLVV
type: DOMAIN
name: Ig_sub
description: Immunoglobulin domain subtype

phrase: WPSSVFKVGKTITLQCRVSHPVLEFSLEWEERTTFQKFSVDGDFLITDIEGQGTGTYSCSYRIEAHPNTWSHRSKPLKLVG
type: DOMAIN
name: Ig_sub
description: Immunoglobulin domain subtype

phrase: ISASLPIRGQELQIRCKGWLEGLGFALYKKGEQEPVQQLGAVGREAFFTIQRMEDKDEGNYSCRTHTEMQPFKWSEPSEPLELVI
type: DOMAIN
name: Ig_sub
description: Immunoglobulin domain subtype

phrase: QPSPVIQMGQNVSLRCGGLMDGVGLALYKKGEEKPLQFLDASSNTGNNSFFLKNVTYRDAGIYSCHYYLTWKTSIKMATYNTVELMV
type: DOMAIN
name: Ig_sub
description: Immunoglobulin domain subtype

phrase: ESNYPQAPWENITLWCKSPSRVSSKFLLLKDNSQMTWIRPPYKTFQVSFFIGALTESNTGLYRCCYWKEKGWSKPSKILE
type: DOMAIN
name: Ig_sub
description: Immunoglobulin domain subtype

phrase: PGMTSLAVESQPELWIESNYPQAPWENITLWCKSPSRVSSKFLLLKDNSQMTWIRPPYKTFQVSFFIGALTESNTGLYR
type: DOMAIN
name: Ig-like_dom
description: Immunoglobulin-like domain

phrase: QMGQNVSLRCGGLMDGVGLALYKKGEEKPLQFLDASSNTGNNSFFLKNVTYRDAGIYSCHYYLTW
type: DOMAIN
name: Ig_sub2
description: Immunoglobulin subtype 2

phrase: KVGKTITLQCRVSHPVLEFSLEWEERTTFQKFSVDGDFLITDIEGQGTGTYSCSYRIEA
type: DOMAIN
name: Ig_sub2
description: Immunoglobulin subtype 2

phrase: IRGQELQIRCKGWLEGLGFALYKKGEQEPVQQLGAVGREAFFTIQRMEDKDEGNYSCRTHTEM
type: DOMAIN
name: Ig_sub2
description: Immunoglobulin subtype 2

phrase: VELMVVAWPSSVFKVGKTITLQCRVSHPVLEFSLEWEERTTFQKFSVDGDFLITDIEGQGTGTYS
type: DOMAIN
name: Ig-like_dom
description: Immunoglobulin-like domain

phrase: PKTWLLVQPSPVIQMGQNVSLRCGGLMDGVGLALYKKGEEKPLQFLDASSNTGNNSFFLKNVTYRDAGIYS
type: DOMAIN
name: Ig-like_dom
description: Immunoglobulin-like domain
Protein sequence:
MSGASSVSSICSSNVSLIPTGPQVFINFRGKDLRKGFMSFLKPALKKEKINVFIDEQEERGKYLISLFDTIGESKIALVIFSEGYCESHWCMDELVKIKEYMDQNRLIIIPIFYRLDLDVVKDLTGKFGDNFWDLVDKYQPEPKKLHKWTEALFSVCELFSLILPKHSDISDRDFVKSIVKAVKKVQKNFFQRRNGEIEYQDFSVPACKLTITMHESPNEEAVQVTVLNEFYQMKNQSPVPSYEFKFWVDLTRPKGNVFMIDARDLSIAWSEDSNHWTWLPLPNQNSNESVMEIAFLKSASWLDVAGKFDTRYLTPRTRYEVVFVVKLEYTFEWETLVKLKLDLPNTWEKPQEQSVDMFDYISDQWLDIPVGEFTTSKKNVGEISFAMYEHECQLWKSGLFVKGVTIRPKY

Annotated regions:
phrase: TGPQVFINFRGKDLRKGFMSFLKPALKKEKINVFIDEQEERGKYLISLFDTIGESKIALVIFSEGYCESHWCMDELVKIKEYMDQNRLIIIPIFYRLDLDVVKDLTGKFGDNFWDLVDKYQPEPKKLHKWTEALFSV
type: DOMAIN
name: TIR_dom
description: Toll/interleukin-1 receptor homology (TIR) domain

phrase: GPQVFINFRGKDLRKGFMSFLKPALKKEKINVFIDEQEERGKYLISLFDTIGESKIALVIFSEGYCESHWCMDELVKIKEYMDQNRLIIIPIFYRLDLDVVKDLTGKFGDNFWDLVDKYQPEPKKLHKWTEALFSVCE
type: DOMAIN
name: TIR_dom
description: Toll/interleukin-1 receptor homology (TIR) domain

phrase: QVFINFRGKDLRKGFMSFLKPALKKEKINVFIDEQEERGKYLISLFDTIGESKIALVIFSEGYCESHWCMDELVKIKEYMDQNRLIIIPIFYRLDLDVVKDLTGKFGDNFWDLVDKYQPEPKKLHKWTEALFSVCELFSLILPKHSDISDRDFVKSIVKAVKKVQKNFFQ
type: DOMAIN
name: TIR_dom
description: Toll/interleukin-1 receptor homology (TIR) domain
Protein sequence:
MSKRKAPQETLNGGITDMLTELANFEKNVNQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQDIVLSEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESAKQPKLLHRVVEQLQKVRFITDTLSKGETKFMGVCQLPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDRSE

Annotated regions:
phrase: RIPREEMLQMQDIVLSEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESAKQPKLLHRVVEQLQKVRFITDTLSKGETKFMGVCQLPSKNDEKEYPHRRIDIRLIP
type: DOMAIN
name: DNA_pol_B_palm_palm
description: DNA polymerase beta, palm domain

phrase: TLNGGITDMLTELANFEKNVNQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQDIVLSEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESAKQPKLLHRVVEQLQKVRFITDTLSKGETKFMGVCQLPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDR
type: DOMAIN
name: DNA-dir_DNA_pol_X
description: DNA-directed DNA polymerase X

phrase: ITDMLTELANFEKNVNQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFEDFEKRIPREEMLQMQDIVLSEVKKVDSEYIATVCGSFRRGAESSGDMDVLLTHPSFTSESAKQPKLLHRVVEQLQKVRFITDTLSKGETKFMGVCQLPSKNDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIFDYIQWKYREPKD
type: DOMAIN
name: DNA-dir_DNA_pol_X
description: DNA-directed DNA polymerase X

phrase: VLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIFDYIQWKYREPKD
type: DOMAIN
name: PolB_thumb
description: DNA polymerase beta, thumb domain

phrase: GSFRRGAESSGDMDVLLTH
type: BINDING_SITE
name: DNA_pol-X_BS
description: DNA polymerase family X, binding site

phrase: NFLTRVSGIGPSAARKFVD
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: AEAKKLPGVGTKIAEKIDE
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: GITDMLTELANFEKNVNQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFL
type: DOMAIN
name: DNA_pol_b-like_N
description: DNA polymerase beta-like, N-terminal domain

phrase: LTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFEDF
type: DOMAIN
name: DNA_pol_lambd_fingers_domain
description: DNA polymerase lambda, fingers domain
Protein sequence:
MAKGGVKKAAAAAARAAANRLMADNRQARHQYEILETLETGIELVGTEVKSIRNGKANLRDGFCLIRNGELQLHNVHISPHSHASAYFNHDPLRTRKLLAHRREIDKLRGQLDKKGLALIPLNIHLKGSWIKITIGVGKGRKLHDKRAADKEKQSKKEVRSAMAKYQ

Annotated regions:
phrase: TGIELVGTEVKS
type: CONSERVED_SITE
name: SsrA-bd_prot_CS
description: SsrA-binding protein, conserved site
Protein sequence:
MTVIRLTRMGRNKKPFYRIVVTDSRKRRDSGWIESIGYFNPVVEPKVLKIDEERYNYWLSVGAKPSEKVKKLASK

Annotated regions:
phrase: TVIRLTRMG
type: CONSERVED_SITE
name: Ribosomal_bS16_CS
description: Small ribosomal subunit protein bS16, conserved site
Protein sequence:
MAAKDVKFGDSARKKMLVGVNVLADAVKATLGPKGRNVVLAKSFGAPTITKDGVSVAKEIELKDAFENMGAQLVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKATAAVVAELKNLSKPCADSKAIAQVGTISANSDDSIGNIIAEAMEKVGKEGVITVEEGSGLENELSVVEGMQFDRGYLSPYFVNKPDTMVAELEGPLLLLVDKKISNIRELLPVLEAVAKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGQVISEEIGLSLETATLEHLGNAKRVILSKENTTIIDGAGADTEIEARVKQIRAQIEETSSDYDREKLQERLAKLAGGVAVIKVGAGTEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALVRALAAIVDLKGENEDQNVGIALLRRAVEAPLRQITANAGDEPSVVADKVKQGSGNFGYNAATGEYGDMIEMGILDPAKVTRSALQAAASIGGLMITTEAMIADAPSEAPAGGGMPDMGGMGGMGGMM

Annotated regions:
phrase: AAVEEGVVPGG
type: CONSERVED_SITE
name: Chaperonin_Cpn60_CS
description: Chaperonin Cpn60, conserved site
Protein sequence:
MREHLNHLHKKVQELPTTSGCYKMYSQNNKILYIGKAKNLRARVKNYFLKRISHKTKILMRNVANIEVITTNSEYEALLLECNLIKEYKPDYNIKLKDDKGYPMIRITCEKYPRIFKTRKIINDGSEYFGPYVNAKNLDLVLDLINKTFKTRKCKKKSKTPCLYFHMGQCLGVCYREDLEEQYKKEVDKIRHILNGKISKLLDETEIKMKEAIKKEDFEAAIKLKETKRSLIEISQTQIITRMNKLSADYIYIHQTDSLNAIVILKYKDGKLVEKDINFDESIYEEDELTAKFITQYYTALNMIVPNKIYIFKKIETENITKLINELKNTKTEIICEETKETIKIMEMAISNAKIALREYDNEKNRALESLKNILEMTKLPKTIEGFDISHLNGHKTVASLVSFKMGKPFKDGYRVYKINSLNNGEIDDLKAIKEVISRRYSKLINEQLALPDLILIDGGKGQLSAAYSILKGLKIENEVIVCALAKKEEIIFLPNKTQGIKLSKGNPALQILQNVRDEAHRRANSFNRTLRRNIKLNYSKIKGIGEEKAKNILKTLGTYKDILLLNEDEIAKKMKINIKMAKKIKKFSEDQNLKNTYSIKS

Annotated regions:
phrase: KLLDETEIKMKEAIKKEDFEAAIKL
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: TSGCYKMYSQNNKILYIGKAKNLRARVKNYFLKRISHKTKILMRNVANIEVITTNSEYEALLLECNLIKEYKPDYNIKLK
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: TTSGCYKMYSQNNKILYIGKAKNLRARVKNYFLKRISHKTKILMRNVANIEVITTNSEYEALLLECNLIKEYKPDYN
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: NILEMTKLPKTIEGFDISHLNGHKTVASLVSFKMGKPFKDGYRVYKINSLNNGEIDDLKAIKEVISRRYSKLINEQLALPDLILIDGGKGQLSAAYSILKGLKIENEVIVCALAKKEEIIFLPNKTQGIKLSKGNPALQILQNVRDEAHRR
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: LPTTSGCYKMYSQNNKILYIGKAKNLRARVKNYFLKRISHKTKILMRNVANIEVITTNSEYEALLLECNLIKEYKPDYN
type: DOMAIN
name: GIY-YIG_UvrC_Cho
description: UvrC/Cho-like, GIY-YIG domain

phrase: GCYKMYSQNNKILYIGKAKNLRARVKNYFLKRISHKTKILMRNVANIEVITTNSEYEALLLECNLIKEYKPDY
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: AIVILKYKDGKLVEKDINFDESIYEEDELTAKFITQYYTALNMIVPNKIYIFKKIETENITKLINELKNTKTEIICEETKETIKIMEMAISNAKIALREYDNEKNRALESLKNILEMTKLPKTIEGFDISHLNGHKTVASLVSFKMGKPFKDGYRVYKINSLNNGEIDDLKAIKEVISRRYSKLINEQLALPDLILIDGGKGQLSAAYSI
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain
Protein sequence:
MILRRRGIVLSFHSNMVTVEDEETGERLLCKLRGKFRLQNLKIYVGDRVEYTPDGTGSGVIENVLHRKNLLVKPHVANVDQAILVVTVKMPETSTYIIDKFLVLTEKNELETVLVINKMDIYDEEDLEKVKELERIYSKLYPIVKTSAKTGMGIEELKKYLKGKISTMAGLSGVGKSSLLNAINPGLKLRVSEVSQKLQRGRHTTTSAQLLRFDFGGYVVDTPGFANLEIGDIEPEELKYYFKEFNEKQCFFSDCNHIDEPECGVKEAVENGEIAESRYENYVKMFHELLGRGKS

Annotated regions:
phrase: GIVLSFHSNMVTVEDEETGERLLCKLRGKFRLQNLKIYVGDRVEYTPDGTGSGV
type: DOMAIN
name: RsgA_N
description: Ribosome biogenesis GTPase RsgA, N-terminal

phrase: ANVDQAILVVTVKMPETSTYIIDKFLVLTEKNELETVLVINKMDIYDEEDLEKVKELERIYSKLYPIVKTSAKTGMGIEELKKYLKGKISTMAGLSGVGKSSLLNAINPGLKLRVSEVSQKLQRGRHTTTSAQLLRFDFGGYVVDTPGF
type: DOMAIN
name: RsgA_GTPase_dom
description: RsgA GTPase domain

phrase: RGIVLSFHSNMVTVEDEETGERLLCKLRGKFRLQNLKIYVGDRVEYTPDGTGSGVIENVLHRKNLLV
type: DOMAIN
name: RsgA_N
description: Ribosome biogenesis GTPase RsgA, N-terminal

phrase: KNLLVKPHVANVDQAILVVTVKMPETSTYIIDKFLVLTEKNELETVLVINKMDIYDEEDLEKVKELERIYSKLYPIVKTSAKTGMGIEELKKYLKGKISTMAGLSGVGKSSLLNAINPGLKLRVSEVSQKLQRGRHTTTSAQLLRFDFGGYVVDTPGFAN
type: DOMAIN
name: G_CP_dom
description: Circularly permuted (CP)-type guanine nucleotide-binding (G) domain

phrase: VLHRKNLLVKPHVANVDQAILVVTVKMPETSTYIIDKFLVLTEKNELETVLVINKMDIYDEEDLEKVKELERIYSKLYPIVKTSAKTGMGIEELKKYLKGKISTMAGLSGVGKSSLLNAINPGLKLRVSEVSQKLQRGRHTTTSAQLLRFDFGGYVVDTPGFANLE
type: DOMAIN
name: RsgA_GTPase_dom
description: RsgA GTPase domain
Protein sequence:
MSRYRGPRVRIIRRLGALPGLTNKTPQLKSSSINQSASNKKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEILLQLLEMRLDNVIFRLGMTPTIPGARQLVNHRHILVNGYIVDIPSYRCKPQDFINIKNQRKSEAIISKNIEFYQKYKIPNHLTYNSLEKKGLVNQILNRESIGLKINELLVVEYYSRQA

Annotated regions:
phrase: LEMRLDNVIFRLGMTPTIPGARQL
type: CONSERVED_SITE
name: Ribosomal_uS4_CS
description: Small ribosomal subunit protein uS4, conserved site

phrase: MRLDNVIFRLGMTPTIPGARQLVNHRHILVNGYIVDIPSYRCKPQDFINIKNQRKSEAIISKNI
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: RYRGPRVRIIRRLGALPGLTNKTPQLKSSSINQSASNKKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEILLQLL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: RYRGPRVRIIRRLGALPGLTNKTPQLKSSSINQSASNKKISQYRIRLEEKQKLRFHYGITERQLLNYVRIARKAKGSTGEILLQLL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: MRLDNVIFRLGMTPTIPGARQLVNHRHILVNGYIVDIPSYRCKPQDF
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain
Protein sequence:
MGASEELEYLKSLVSQLNGKIAAIEAKAKGSPSPTPAQQLRTILIGPPGAGKGTQAPKIRDEFCVCHLATGDMLREQVQQKTPLGIEAKKIMDAGGLVSDDIMVGIIKDQLENNKSCKNGFVLDGFPRTIPQAQKLDGMLAERKEKIDSVVQLLIDDQLLISRITGRLVHPASGRSYHKEFNPPKKRNVDDVTGEPLIQRSDDNVETLTKRLRTFHSQTGPVVDYYKVKGLWHGIDAAQSPSVVWENLRSIFVSKK

Annotated regions:
phrase: FVLDGFPRTIP
type: CONSERVED_SITE
name: Adenylat_kinase_CS
description: Adenylate kinase, conserved site

phrase: RLVHPASGRSYHKEFNPPKKRNVDDVTGEPLIQRS
type: DOMAIN
name: Adenylate_kinase_lid-dom
description: Adenylate kinase, active site lid domain
Protein sequence:
MEMNNKRRRQTMIMYFIAGLVLAFALQRALFTNISAAKVEQVTYSKFVSMVEDGKVNSVNLNQSNNEISFKTDNKDISYVTTAWPNDIALTSLLKQHKVTFASTVDDKSSGMWMYLVASYLIPIALVWLGFWFLRRRLSKQMGDDGPSMNFGGGLGFGGVGKSGAKIVADKDNDTTFRDVAGQDEAKESLAEIVNFLEHPEKYAAIGARCPRGALLVGPPGTGKTLLAKAVAGEAKVPFFQIAGSEFVEMFVGRGAARVRDLFKQANEKAPCIVFIDEIDTIGKKRGVSLNSNDEREQTLNQLLTEMDGFDNHKGIVVLAATNQPDVLDPALLRPGRFDRRIPVELPDLTGRESILKLHSHDVKMESGVDFAQIARTTPGASGADLANMINEAALRAVRQGRKYVTQEDIEESVDTVIAGEKKKSTVLSEHEKEIVAYHETGHAIVAAVQDGKTPVSKITIVPRTSGALGFTMQAEEDERYLTTREEFKQRIAVLCGGRAAEELIFGHMSSGAANDIEKATKIARAMVTQLGMSDKFGMMALGERRNMYLGGGSELTCSEGTAREVDDEVRRLVEEGHQTALATLRENRFKLHEIAHYLQRKETITGEEFMNILSRNDGFAPAIVSEARPN

Annotated regions:
phrase: CPRGALLVGPPGTGKTLLAKAVAGEAKVPFFQIAGSEFVEMFVGRGAARVRDLFKQANEKAPCIVFIDEIDTIGKKRGVSLNSNDEREQTLNQLLTEMDGFDNHKGIVVLAATNQPDVLDPALLRPGRFDRRIPVELP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VDFAQIARTTPGASGADLANMINEAALRAVRQGRKYVTQEDIE
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: IMYFIAGLVLAFALQRALFTNISAAKVEQVTYSKFVSMVEDGKVNSVNLNQSNNEISFKTDNKDISYVTTAWPNDIALTSLLKQHKVTFA
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular

phrase: VLSEHEKEIVAYHETGHAIVAAVQDGKTPVSKITIVPRTSGALGFTMQAEEDERYLTTREEFKQRIAVLCGGRAAEELIFGHMSSGAANDIEKATKIARAMVTQLGMSDKFGMMALGERRNMYLGGGSELTCSEGTAREVDDEVRRLVEEGHQTALATLRENRFKLHEIAHYLQRKETITGEEFMN
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: IVVLAATNQPDVLDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: LLVGPPGTGKTLLAKAVAGEAKVPFFQIAGSEFVEMFVGRGAARVRDLFKQANEKAPCIVFIDEIDTIGKKRGVSLNSNDEREQTLNQLLTEMDGFDNHKGIVVLAATNQPDVLDPALLRPGRFDRRIPV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core
Protein sequence:
MRIDILSIFPEMFGPLNQSIVGKAQDKGILELHTHDFRENATNKQRHVDDMPYGGGQGMLLMPQPIFDTMDKIPQKPEKPARVILLDPAGKKFDQKMAEELSQEEQLIFICGHYEGYDERIKTLVTDEISLGDFVLTGGEVAATVMVDAVVRLIPGVLGKVASHEDDSFSSGLLEYPQYTRPEDFRGMKVPEVLMSGHHENIRKWRLKESLRKTLERRPDLLDKYEPNEEELKMLQLLRENVQDVVE

Annotated regions:
phrase: GKAQDKGILELHTHDFRENATNKQRHVDDMPYGGGQGMLLMPQPIFDTMDKIPQKPEKPARVILLDPAGKKFDQKMAEELSQEEQLIFICGHYEGYDERIKTLVTDEISLGDFVLTGGEVAATVMVDAVVRLIPGVLGKVASHEDDSFSSGLLEYPQYTRPEDFRGMKVPEVLMSGHHENIRKWRLKESLRKTLERR
type: DOMAIN
name: tRNA_MeTrfase_TRMD/TRM10
description: tRNA methyltransferase TRMD/TRM10-type domain
Protein sequence:
DVQMIQSPSSLSASLGDIVTMTCQASQGTNINLNWFQQKPGKAPKLLIYGASILEAGVPSRFSGRRYGTDFTLTISSLEDEDMATYFCLQHSYLPYTFGGGTKLEKKR

Annotated regions:
phrase: DVQMIQSPSSLSASLGDIVTMTCQASQGTNINLNWFQQKPGKAPKLLIYGASILEAGVPSRFSGRRYGTDFTLTISSLEDEDMATYF
type: DOMAIN
name: Ig-like_dom
description: Immunoglobulin-like domain

phrase: PSSLSASLGDIVTMTCQASQGTNINLNWFQQKPGKAPKLLIYGASILEAGVPSRFSGRRYGTDFTLTISSLEDEDMATYFCLQHSYLPYTFGGGTKLEK
type: DOMAIN
name: Ig_sub
description: Immunoglobulin domain subtype

phrase: IVTMTCQASQGTNINLNWFQQKPGKAPKLLIYGASILEAGVPSRFSGRRYGTDFTLTISSLEDEDMATYFCL
type: DOMAIN
name: Ig_V-set
description: Immunoglobulin V-set domain

phrase: QSPSSLSASLGDIVTMTCQASQGTNINLNWFQQKPGKAPKLLIYGASILEAGVPSRFSGRRYGTDFTLTISSLEDEDMATYFCLQHSYLPYTFGGGTK
type: DOMAIN
name: Ig_V-set
description: Immunoglobulin V-set domain
Protein sequence:
MADIIGGEVVTELVRQLYAVSQKTLRCRGIAKNLATMIDGLQPTIKEIQYSGVELTPHRQAQLRMFSETLDKCRKLTEKVLKSSRWNMVRQLLHVRKMENLQSKVSSFLNGQLLVHVLADVHHVRADSEFRFDRIDRKVDSLNEKLGSMKLRGSESLREALKTAEATVEMVTTDGADLGVGLDLGKRKVKEMLFKSIDGERLIGISGMSGSGKTTLAKELARDEEVRGHFGNKVLFLTVSQSPNLEELRAHIWGFLTSYEAGVGATLPESRKLVILDDVWTRESLDQLMFENIPGTTTLVVSRSKLADSRVTYDVELLNEHEATALFCLSVFNQKLVPSGFSQSLVKQVVGECKGLPLSLKVIGASLKERPEKYWEGAVERLSRGEPADETHESRVFAQIEATLENLDPKTRDCFLVLGAFPEDKKIPLDVLINVLVELHDLEDATAFAVIVDLANRNLLTLVKDPRFGHMYTSYYDIFVTQHDVLRDVALRLSNHGKVNNRERLLMPKRESMLPREWERNNDEPYKARVVSIHTGEMTQMDWFDMELPKAEVLILHFSSDKYVLPPFIAKMGKLTALVIINNGMSPARLHDFSIFTNLAKLKSLWLQRVHVPELSSSTVPLQNLHKLSLIFCKINTSLDQTELDIAQIFPKLSDLTIDHCDDLLELPSTICGITSLNSISITNCPRIKELPKNLSKLKALQLLRLYACHELNSLPVEICELPRLKYVDISQCVSLSSLPEKIGKVKTLEKIDTRECSLSSIPNSVVLLTSLRHVICDREALWMWEKVQKAVAGLRVEAAEKSFSRDWLDD

Annotated regions:
phrase: MADIIGGEVVTELVRQLYAVSQKTLRCRGIAKNLATMIDGLQPTIKEIQYSGVELTPHRQAQLRMFSETLDKCRKLTEKVLKSSRWNMVRQLLHVRKMENLQSKVSSFLNGQLLVHVLADVHHVRADSEFRFDRIDRKVDSLNEKL
type: DOMAIN
name: Powdery_mildew-R_dom
description: Powdery mildew resistance protein, RPW8 domain

phrase: KNLSKLKALQLLRLYACHELNSLPVEICELPRLKYVDISQCVSLSSLPEKIGKVKTLEKIDTRECSLSSIPNSVVLLTSLRHVICD
type: DOMAIN
name: LRR_R13L4/SHOC2-like
description: Disease resistance R13L4/SHOC-2-like, LRR domain

phrase: GEVVTELVRQLYAVSQKTLRCRGIAKNLATMIDGLQPTIKEIQYSGVELTPHRQAQLRMFSETLDKCRKLTEKVLKSSRWNMVRQLLHVRKMENLQSKVSSFLNGQLLVHVLADVHHV
type: DOMAIN
name: Powdery_mildew-R_dom
description: Powdery mildew resistance protein, RPW8 domain

phrase: GERLIGISGMSGSGKTTLAKELARDEEVRGHFGNKVLFLTVSQSPNLEELRAHIWGFLTSYEAGVGATLPESRKLVILDDVWTRESLDQLMFENIPGTTTLVVSRSKLADSRVTYDVELLNE
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: KRKVKEMLFKSIDGERLIGISGMSGSGKTTLAKELARDEEVRGHFGNKVLFLTVSQSPNLEELRAHIWGFLTSYEAGVGATLPESRKLVILDDVWTRESLDQLMFENIPGTTTLVVSRSKLADSRVTYDVELLNEHEATALFCLSVFNQKLVPSGFSQSLVKQVVGECKGLPLSLKVIGASLKERPEKYWEGAVERLSRG
type: DOMAIN
name: NB-ARC
description: NB-ARC
Protein sequence:
MFKNTFQSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIEGTNVSTTYITCPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAEFKLYLPVQNKAKQ

Annotated regions:
phrase: MFKNTFQSGFLSILYSIGSKPLQIWDKKVRNGHIKRITDNDIQSLVLEIEGTNVSTTYITCPADPKKTLGIKLPFLVMIIKNLKKYFTFEVQVLDDKNVRRRFRASNYQSTTRVKPFICTMPMRLDDGWNQIQFNLSDFTRRAYGTNYIETLRVQIHANCRIRRVYFSDRLYSEDELPAEFKL
type: DOMAIN
name: CFA20_dom
description: CFA20 domain
Protein sequence:
MTKQLNVAVVGATGAVGSKIMEKLVERKFPIASIKFLASARSAGNPIEFNGKTYTIEEATPESFEGVDIALFSAGGSVSAALAPEAAKRGAVVIDNTSHFRMDPEVPLVVPEVNRHALKVIPKGIIANPNCSTIQMVAALQPIREKFGLTKIVVSTYQAVSGSGIAAINELREQSTQWEQGKNVEANVLPVKSDAKHFPIARNVIPQIDKFTDNGFTYEEMKMINETKKIMEAPDMNVAATCVRVPVVSGHSESVYIELEQEATVQAIFDVLKDAPSIVLQDDITQQIYPMPIFAENEDPTFVGRIRQDLDNKKGFHLWIVSDNLLKGAALNSIQIAEAMLEDNLL

Annotated regions:
phrase: NVAVVGATGAVGSKIMEKLVERKFPIASIKFLASARSAGNPIEFNGKTYTIEEATPESFEGVDIALFSAGGSVSAALAPEAAKRGAVVIDNTSHFRMDPEVPLVVPEVNRHAL
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: VAATCVRVPVVSGH
type: CONSERVED_SITE
name: Asp-semialdehyde_DH_CS
description: Aspartate-semialdehyde dehydrogenase, conserved site

phrase: NVAVVGATGAVGSKIMEKLVERKFPIASIKFLASARSAGNPIEFNGKTYTIEEATPESFEGVDIALFSAGGSVSAALAPEAAKRGAVVIDNTSHFRMDPEVPLVVPEVNRHALKV
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: LQPIREKFGLTKIVVSTYQAVSGSGIAAINELREQSTQWEQGKNVEANVLPVKSDAKHFPIARNVIPQIDKFTDNGFTYEEMKMINETKKIMEAPDMNVAATCVRVPVVSGHSESVYIELEQEATVQAIFDVLKDAPSIVLQDDITQQIYPMPIFAENEDPTFVGRIRQDLDNKKGFHLWIVSDNLL
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain