nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MVFTVSCSKMSSIVDRDDSSIFDGLVEEDDKDKAKRVSRNKSEKKRRDQFNVLIKELGSMLPGNARKMDKSTVLQKSIDFLRKHKEITAQSDASEIRQDWKPTFLSNEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSVFNFIPEGEHSEVYKILSTHLLESDSLTPEYLKSKNQLEFCCHMLRGTIDPKEPSTYEYVRFIGNFKSLNSVPTSAHNGFEGTIQRTHRPSYEDRVCFVATVRLATPQFIKEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSYAEVRAERRRELGIEESLPDAAADKSQDSGSDNRINTVSLKEALERFDHSPTPSASSRSSRKSSHTAVSDPSSTPTKIPTDTSTPPRQHLPAHEKMAQRRSSFSSQSMNSQSVGPSLTQPVISQAANLPVPQGMSQFQFSAQLGAMQHLKDQLEQRTRMIEANIHRQQEELRKIQEQLQMVHGQGLQMFLQQSNPGLNFGSVQLSSGNSSNIQQLTPINMQGQVVPTNQIQSGMNAGHIGTSQHLIQQQSLQSTSTQQSQQSVMSGHSQQTSLASQTQSTLTAPLYNTMVISQPAPGSMVQIPSSMPQNSTQSATVTTFTQDRQIRFSQGQQLVTKLVTAPVACGAVMVPSTMLMGQVVTAYPTFATQQQQAQTLSVTQQQPQQQQPQQQQPQQQQPQQQQQSSQEQQLPSVPQPSQAQLTQSPQQFLQTSRLLHGNPSTQLILSAAFPLQQSTFPPSHHQQHQSQQQQQLSRHRTDSLTDPSKVQPQ

Annotated regions:
phrase: KFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQY
type: DOMAIN
name: PAS
description: PAS domain

phrase: NKSEKKRRDQFNVLIKELGSMLPGNARKMDKSTVLQKSIDFLRKHKEITA
type: DOMAIN
name: bHLH_dom
description: Myc-type, basic helix-loop-helix (bHLH) domain

phrase: KRVSRNKSEKKRRDQFNVLIKELGSMLPGNARKMDKSTVLQKSIDFLR
type: DOMAIN
name: bHLH_dom
description: Myc-type, basic helix-loop-helix (bHLH) domain

phrase: EFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSVFNFIPEGEHSEVYKILSTHL
type: DOMAIN
name: PAS
description: PAS domain

phrase: KEMCTVEEPNEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLM
type: DOMAIN
name: PAS
description: PAS domain

phrase: NEEFTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSVFNFIPEGEHSEVYKILSTHLLE
type: DOMAIN
name: PAS
description: PAS domain

phrase: FTQLMLEALDGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSVFNFIPEGEHSEVYKILSTHLLE
type: DOMAIN
name: PAS_fold
description: PAS fold

phrase: LDGFFLAIMTDGSIIYVSESVTSLLEHLPSDLVDQSVFNFIPEGEHSEVYKILSTHLLESDSLTPEYLKSKNQLEFCCHMLRGTIDPKEPSTYEYVRF
type: DOMAIN
name: PAS
description: PAS domain

phrase: EFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCT
type: DOMAIN
name: PAS
description: PAS domain

phrase: SCYYRFLTKGQQWIWLQTHYYITYHQWNSRPEFIVCTHTVVSY
type: REPEAT
name: PAC
description: PAC motif

phrase: AKRVSRNKSEKKRRDQFNVLIKELGSMLPGNARKMDKSTVLQKSIDFLRK
type: DOMAIN
name: bHLH_dom
description: Myc-type, basic helix-loop-helix (bHLH) domain
Protein sequence:
MHSFKLLLALIVAICTSCDAVPRGSLSDESNFKSYPVAQYEAANHRLLRAKDGKVRADEERLSSNPDSMLTRIKSFVNPGPFHELVRTATAIAERLKETVHSTLDHWLTIQRFNHLLGHCDHDSMDSAIVRGFHPSEFRVWLDLKSPLATEVVDSLDEWPKSTQLQSLLKFIKHYHSLLLPPPNHWAKVRASINPSHASSKPLFHDVYGIKEALEEMDHIIDQDLSVATMLEQKVSPLLYKVALEARELKTGKRIDRSKLNRFIKGYMAQYPSLDKFESMVNGYAPPGKFRKIPTFKGLDDDVINPPKYLNP

Annotated regions:
Protein sequence:
MLGGTFDPIHDGHLALARRFAELLDLTELVLLPAGQPYQKRDVSAAEHRLAMTRAAAGTLSVPGVTVTVATDEIEHTGPTYTVETLARWRERIGPDASLSLLIGADQLVRLDTWRDWRTLFDYAHIGVSTRPGFELGAAPPDVAREIAARQARADVLKATPAGRLLIDTTLSFDIAATDIRAHLRECIARHAQMPDASAEHVPAAVWAYILQHRLYHS

Annotated regions:
phrase: MLGGTFDPIHDGHLALARRFAELLDLTELVLLPAGQPYQKRDVSAAEHRLAMTRA
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: MLGGTFDPIHDGHLALARRFAELLDLTELVLLPAGQPYQKRDVSAAEHRLAMTRAAAGTLSVPGVTVTVATDEIEHTGPTYTVETLARWRERIGPDASLSLLIGADQLVRLDTWRDWRTLFDYAHIGVSTRPGFELGAAPPDVAREIAARQARADVLKATPAGRLLIDTTLSFDIAATDI
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain
Protein sequence:
MSYRESSGSFPAPDRTSLPKMFTNGDSRLRHLPPISSPPPPKRYKSESTPGSDAGHSRYYSHSVASDRTRSRQPSSAMDLYTLIDRDPVDKDPRRNARFTSNGSVATQASHASNASQISRSSPIIISDRKIPEKYPNHKENGRMYHGYRKGIYPLPCDEEEQDRLDIFHKLFTVARAEDGLIYAPHPPGSRILDLGCGTGIWSIEVANKFPGSFVVGVDLAPIQPTNTPKNCDFYAPFDFEAPWTMGEDSWDIIHMQMGCGSVASWPSLYRRVFQHLKPGGWFEQVEIDFRPRVEDKDGEPGRAMANWYSTLKHATEATMRPLAHSSNETIRNLQEAGFTEIDHQIVGLPMNPWHPDSHEQKVARWYNLAISESVQPMCLAPFSRVLSWTREQIDRIAFDVKQEAFDKRIKTYNLLHIYQARKPVEE

Annotated regions:
Protein sequence:
MCSTYGLLSFEFSDTAAMDPIFFSPTNGIPSESKLATYMNRQNVATPSGYGLNNGFSLLNLDSPLNKKSQVTPQSPEFIPTRLGSTPNFYAPYHNAPMQLSNGLNGVNGLTAAAAAAAAAAAAAAAAVPSSTSSASSASVTISKTANGGASMLALQKTASIASVTIAQQQPQHPQKQQQHPPSVGGGAVSAASAPIAISGAPPNPAAAPFVSSMSAQTPLKGRGAMMRQESPTAAMISGAGPGEKSPPHGMTPHGASPIPSALPTSVHQENVGGTIYFYPTANAQNSQPVVNSMVVDGTHPALHGVSAVAPMSAGVPAAMMYTGHVYPGPSSNVVTMQPKTLLESAFFMPDEMRAEVLARNEISNLIMDAAEAAQHALPLEVENYHALYPLEPPAQPLHAKLTFPATTYRATHNTTGYKYCLRRIHGFRLQSTKCMTLVEMWKKLQHTNVVQLREVFTTKAFGDNSLVLVYDYHPGSQTLLAKYFTPAPETNGYTDPFQGEARPFSHKSNMQRTSNGPLLPEATIWSIIMQLTAGLKAIHHAGLACKVLDPTKIIVTGKRVRFSSCCISDITQFDPNASNPLALVNMHQQDDLTALGRLVLALACRCLQSVQRDNVQSSIDMVTRNYSTDLRNFIVYLFTTNNRRSVTDLMPMIGARFYTQLDALQSKIDMQEDELAKEMENGRLYRILVKLNSINERPDFNLDCTWSETGDRYMLKLFRDYLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERVQLMSRDEQSVLIVSYAELKNCLENAFSELMSSAAN

Annotated regions:
phrase: VTDLMPMIGARFYTQLDALQSKIDMQEDELAKEMENGRLYRILVKLNSINERPDFNLDCTWSETGDRYMLKLFRDYLFHSVTEDGRPWLDHAHIVQCLNKLDAGSIERVQLMSRDEQSVLIVSYAELKNCLENAFSE
type: DOMAIN
name: Pan3_PK
description: Pan3 pseudokinase domain

phrase: KSPPHGMTPHGASPIPSALPTSVHQENVGGTIYFYPTAN
type: DOMAIN
name: DUF4797
description: Domain of unknown function DUF4797
Protein sequence:
MNLEGKHILLGISGGIAAYKIPMVIRLLKKQGAQVRVVLTRAASQFVTELTLSTVSQEPVLREIFPESHASQQDWTRHISLGDWADALVIAPATAHTLAKLTAGLCDDLLSTCFITLPADKPRLIFPAMDGHMYRSPSVQRNIGWLMEQGCIVIEPESGALASGQCGTGRMPEPETIADAVARAIGDHHSPATGSFAGRNIIVTAGPTRENIDGVRFISNHSSGKMGFAIACAAARRGADVTLITGPVALETPADVRRIDVTTACEMDQAVKDISGACDIFIGAAAVADYRPAEPVDGKIRKTAETMQLSLVRNPDILAGFASRKQPGQLAIGFALETEGNLDAAREKLQAKRLDLIAFNTYDGMTTGFDVDTNILTLISKNGETTTLPLLSKQEAARRLLDNIQALLPAPHPTATND

Annotated regions:
phrase: AGRNIIVTAGPTRENIDGVRFISNHSSGKMGFAIACAAARRGADVTLITGPVALETPADVRRIDVTTACEMDQAVKDISGACDIFIGAAAVADYRPAEPVDGKIRKTAETMQLSLVRNPDILAGFASRKQPGQLAIGFALETEGNLDAAREKLQAKRLDLIAFNTYDGMTTGFDVDTNILTL
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal

phrase: KHILLGISGGIAAYKIPMVIRLLKKQGAQVRVVLTRAASQFVTELTLSTVSQEPVLREIFPESHASQQDWTRHISLGDWADALVIAPATAHTLAKLTAGLCDDLLSTCFITLPADKPRLIFPAMDGHMYRSPSVQRNIGWLMEQGCIVIEPESGALASGQCGTGRMPEPETIADAVA
type: DOMAIN
name: Flavoprotein
description: Flavoprotein
Protein sequence:
MNKTLIALAVSAAAVATGAYADGINQSGDKAGSTVYSAKGTSLEVGGRAEARLSLKDGKAQDNSRVRLNFLGKAEINDSLYGVGFYEGEFTTNDQGKNASNNSLDNRYTYAGIGGTYGEVTYGKNDGALGVITDFTDIMSYHGNTAAEKIAVADRVDNMLAYKGQFGDLGVKASYRFADRNAVDAMGNVVTETNAAKYSDNGEDGYSLSAIYTFGDTGFNVGAGYADQDDQNEYMLAASYRMENLYFAGLFTDGELAKDVDYTGYELAAGYKLGQAAFTATYNNAETAKETSADNFAIDATYYFKPNFRSYISYQFNLLDSDKVGKVASEDELAIGLRYDF

Annotated regions:
phrase: TSLEVGGRAEARLSLKDGKAQDNSRVRLNFLGKAEINDSLYGVGFYEGEFTTNDQGKNASNNSLDNRYTYAGIGGTYGEVTYGKNDGALGVITDFTDIMSYHGNTAAEKIAVADRVDNMLAYKGQFGDLGVKASYRFADRNAVDAMGNVVTETNAAKYSDNGEDGYSLSAIYTFGDTGFNVGAGYADQDDQNEYMLAASYRMENLYFAGLFTDGELAKDVDYTGYELAAGYKLGQAAFTATYNNAETAKETSADNFAIDATYYFKPNFRSYISYQFNLLDSDKVGKVASEDELAIGLRYD
type: DOMAIN
name: Gram_neg_porin_domain
description: Porin domain, Gram-negative type

phrase: LAVSAAAVATGAYADGINQSGDKAGSTVYSAKGTSLEVGGRAEARLSLKDGKAQDNSRVRLNFLGKAEINDSLYGVGFYEGEFTTNDQGKNASNNSLDNRYTYAGIGGTYGEVTYGKNDGALGVITDFTDIMSYHGNTAAEKIAVADRVDNMLAYKGQFGDLGVKASYRFADRNAVDAMGNVVTETNAAKYSDNGEDGYSLSAIYTFGDTGFNVGAGYADQDDQNEYMLAASYRMENLYFAGLFTDGELAKDVDYTGYELAAGYKLGQAAFTATYNNAETAKETSADNFAIDATYYFKPNFRSYISYQF
type: DOMAIN
name: Gram_neg_porin_domain
description: Porin domain, Gram-negative type
Protein sequence:
MSIRKTNPFISMANSYVMDAPEPSNMSYFWNFGSLLGVCLVMQLCTGMFLAMHYCSNLDLAFISVQHMMTEVNYGWLLRYAHSNGAGFFFMFVYLHMARGIYYGSYRKPRMALWNMGVMMFLLMMMTAFMGYCLVYGQMSHWGATVMTNLVTAMPYLGQAMAEFIWGGSSVSNPTIQRFFSLHYLLPFVIAGICCLHLLALHSHGSNNPLGMTANIDRMPMHPFFLFKDTVTIFAFLFVYFFLISYYPEYLGDPENNIPGNPLVTPAAIVPEFYLLPFYAILRAISSKMMGVLAMLFAILILFVLPFVDFSIIRGNAFKFLSKILFGFFCVNFILLGLIGAMHIEVPYIIIGQLATIFYFSYFMILLPLISILENMLFYLAIKR

Annotated regions:
phrase: MSIRKTNPFISMANSYVMDAPEPSNMSYFWNFGSLLGVCLVMQLCTGMFLAMHYCSNLDLAFISVQHMMTEVNYGWLLRYAHSNGAGFFFMFVYLHMARGIYYGSYRKPRMALWNMGVMMFLLMMMTAFMGYCLVYGQMSHWGATVMTNLVTAMPYLGQAMAEFIWGGSSVSNPTIQRFFSLHYLLPFVIAGICCLHLLALHSHGSNNP
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: GMTANIDRMPMHPFFLFKDTVTIFAFLFVYFFLISYYPEYLGDPENNIPGNPLVTPAAIVPEFYLLPFYAILRAISSKMMGVLAMLFAILILFVLPFVDFSIIRGNAFKFLSKILFGFFCVNFILLGLIGAMHIEVPYIIIGQLATIFYFSYFMILLPLISILENMLFYL
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: PFISMANSYVMDAPEPSNMSYFWNFGSLLGVCLVMQLCTGMFLAMHYCSNLDLAFISVQHMMTEVNYGWLLRYAHSNGAGFFFMFVYLHMARGIYYGSYRKPRMALWNMGVMMFLLMMMTAFMGYCLVYGQMSHWGATVMTNLVTAMPYLGQAMAEFIWGGSSVSNPTIQRFFSLHYLLPFVIAGICCLHLLALHSHGS
type: DOMAIN
name: Cytochrome_b_N_euk/bac
description: Cytochrome b/b6, N-terminal domain, eukaryotic/bacterial

phrase: MDAPEPSNMSYFWNFGSLLGVCLVMQLCTGMFLAMHYCSNLDLAFISVQHMMTEVNYGWLLRYAHSNGAGFFFMFVYLHMARGIYYGSYRKPRMALWNMGVMMFLLMMMTAFMGYCLVYGQMSHWGATVMTNLVTAMPYLGQAMAEFIWGGSSVSNPTIQRFFSLHYLLPFVIAGICCLHLLALHS
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: NPLGMTANIDRMPMHPFFLFKDTVTIFAFLFVYFFLISYYPEYLGDPENNIPGNPLVTPAAIVPEFYLLPFYAILRAISSKMMGVLAMLFAILILFVLPFVDFSIIRGNAFKFLSKILFGFFCVNFILLGLIGAMHIEVPYIIIGQL
type: DOMAIN
name: Cytochrome_b_C_euk/bac
description: Cytochrome b/b6, C-terminal domain, eukaryotic/bacterial

phrase: PGNPLVTPAAIVPEFYLLPFYAILRAISSKMMGVLAMLFAILILFVLPFVDFSIIRGNAFKFLSKILFGFFCVNFILLGLIGAMHIEVPYIIIGQLATIFY
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal
Protein sequence:
MASSSSNRQFSHRNVNTFLTYPHCPENPEIVCQMIWELVGRWTPKYIICAQEAHKDGDMHLHALLQTEKPVRITDSRFFDIEGFHPNIQSAKSVNKVRDYILKEPLAVFERGTFIPRKSSFQGNPSKGNSEKKPSKDEIMREIISHSTSKLEYLSMIRKEFPYDWATKLQYFEYSANKLFPEIQEEFISPHPPSSPDLLCNESIKDWLQPNIFQVSPESYMLLQPTCYTLEDAISDLEWMDKLSSQQMKEQESRASTSSVQQELGNLLGPEA

Annotated regions:
phrase: FSHRNVNTFLTYPHCPENPEIVCQMIWELVGRWTPKYIICAQEAHKDGDMHLHALLQTEKPVRITDSRFFDIEGFHPNIQSAKSVNKVRDYILKEPLAVFERGTFI
type: DOMAIN
name: CRESS_DNA_REP
description: CRESS-DNA virus replication initiator protein, endonuclease domain

phrase: EKKPSKDEIMREIISHSTSKLEYLSMIRKEFPYDWATKLQYFEYSANKLFPEIQEEFISPHPPSSPDLLCNESIKDWLQPNIFQVSPESYMLLQPTCYTLEDAISDLE
type: DOMAIN
name: Gemini_AL1_REP_central
description: Geminivirus AL1 replication-associated protein, central domain

phrase: SHRNVNTFLTYPHCPENPEIVCQMIWELVGRWTPKYIICAQEAHKDGDMHLHALLQTEKPVRITDSRFFDIEGFHPNIQSAKSVNKVRDYILKEPLAVFERGT
type: DOMAIN
name: CRESS_DNA_REP
description: CRESS-DNA virus replication initiator protein, endonuclease domain
Protein sequence:
MTTLNGKRIVVGISGGIAAYKSIELIRLLRKSDAEVRVVLTAAAAHFVTPLTLQAISGNPVAESLLDPQAELAMGHIELAKWADLIVIAPATADLAARLAVGMANDLLSTICLATTAPILLAPAMNQQMFRQAVVQQNLAVLQQRGMRLIGPNSGEQACGDVGAGRMSEPNEIFSAIQTALSTAQQFKGLKVAITAGPTREAIDPVRFISNHSSGKMGFALARAFAEQGAEVSLIAGPVNLTTPPNVQRYDVESAQQMHGLTLSLAPRQDIVIGCAAVADYRMETIADQKLKKQDGSDQLILKLVKNPDIIADVAALSANRPFVVGFAAETQDVLEYAAKKLQAKNLDMICANDVAVQGQGFNSEQNALTVLWKNGQQQLPLSDKFSLSQKLAALIVQQYQTAQII

Annotated regions:
phrase: KRIVVGISGGIAAYKSIELIRLLRKSDAEVRVVLTAAAAHFVTPLTLQAISGNPVAESLLDPQAELAMGHIELAKWADLIVIAPATADLAARLAVGMANDLLSTICLATTAPILLAPAMNQQMFRQAVVQQNLAVLQQRGMRLIGPNSGEQACGDVGAGRMSEPNEIFSAIQ
type: DOMAIN
name: Flavoprotein
description: Flavoprotein

phrase: KGLKVAITAGPTREAIDPVRFISNHSSGKMGFALARAFAEQGAEVSLIAGPVNLTTPPNVQRYDVESAQQMHGLTLSLAPRQDIVIGCAAVADYRMETIADQKLKKQDGSDQLILKLVKNPDIIADVAALSANRPFVVGFAAETQDVLEYAAKKLQAKNLDMICANDVAVQGQGFNSEQNALTV
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal
Protein sequence:
MEEGSKENCGFNGSPMGSRSPPKQLTSAASVLGEIQIAAANLKTPTKPQERNNADPWTPTANLKMLISAASPEIRNREREILEEQFSGDELEKTLPSRKEKSLGLLCHKFLARYPSYPNPAVNNSICLDEVAGELSVERRRIYDIVNVLESLHMVSRLAKNKYIWHGRLNLSKTFDALKKVGEENRYGEQIQLLRKREQEECDSQNSPNAETQKPLAKQPEVGFVELPGLEFRAASVNSRKEKSLRVMSQRFVMLFLVSDPQIVSLEVAAKILIGEDQLEDLDKSKFKTKIRRLYDIANVLTSLNLIKKVHVTEEKGRKPAFQWTCPELCTDDQENRSSPAALTPVAIDLSSPKENCAKNLFASGGKTFTRHPSLIKLAKSIENDRRKINSAPSSPIKSGDGSSSAASKMAQLAAICKQQLQQSRDQTKVKLKVSACKAKSTVKQPGGSDKNQTPTYCRAIPLLHPHPSAAPPYTVIVQPPQEQTLSRQSPPALGYTNRTPPEAPLQGGRHEGDGTSHSEDHSAQERHPKRLPESDRGCTSKRMKSSAVDDVTETLYPSGYLIPIHLAPVAPEPSKENTGPSSENKLFTSPIPGVFPLKLMFSPGPVTAVPVMSRGGQHVGGGSGSASRSPSPGMFTFALQNRELISAGLPQGATVSPRNGRGQEELSAASVLNCKHVSPVPYHGQPFTVFALQQSAVPVTPKGYHSLQETFFRTPGGMGCSPPESARKLDVGTDD

Annotated regions:
phrase: RKEKSLRVMSQRFVMLFLVSDPQIVSLEVAAKILIGEDQLEDLDKSKFKTKIRRLYDIANVLTSLNLIKKVHVTEEKGRKPAFQWT
type: DOMAIN
name: E2F_WHTH_DNA-bd_dom
description: E2F/DP family, winged-helix DNA-binding domain

phrase: RKEKSLGLLCHKFLARYPSYPNPAVNNSICLDEVAGELSVERRRIYDIVNVLESLHMVSRLAKNKYIWH
type: DOMAIN
name: E2F_WHTH_DNA-bd_dom
description: E2F/DP family, winged-helix DNA-binding domain

phrase: KEKSLGLLCHKFLARYPSYPNPAVNNSICLDEVAGELSVERRRIYDIVNVLESLHMVSRLAKNKYIWH
type: DOMAIN
name: E2F_WHTH_DNA-bd_dom
description: E2F/DP family, winged-helix DNA-binding domain

phrase: KEKSLRVMSQRFVMLFLVSDPQIVSLEVAAKILIGEDQLEDLDKSKFKTKIRRLYDIANVLTSLNLIKKVHVTEEKGRKPAFQW
type: DOMAIN
name: E2F_WHTH_DNA-bd_dom
description: E2F/DP family, winged-helix DNA-binding domain
Protein sequence:
MKKQNPWISLSEEEKNQIFNFSESYKKFISKFKTEREVTSYALDKAKKRGFIDAEEKKNLIPGDKIFYTCREKSVAFAIIGKNPIENGMNLIVSHTDSPRLDAKPSPISEENELAFLKTNYYGGIKKYQWLSTPLSIRGVVFLKNGEKVEINIGDNENDPVFVIPDILPHLDKKIQRNKKSDEIIEGENLKILIGSLPIESKEQDKVKLGTLQLIKEKYKIEEEDFVSSEIEIVPAGTAKDVGFDKALIGAYGQDDKICAYASLEAIFDLEEIPSKTAICFLVDKEEIGSTGSTGLDSRYLEYFVSDMIFKIKKSEYNNLQVQKALWNSKSISADVCAAINPIFNSVHDAQNAPKLGYGIPIMKYTGHGGKVMASDADAELVSYIRQLLNKNNIAWQVATLGKVEEGGGGTVAKFLASYGIRTIDMGPAVISMHSPMEITSKFDLYNAYLAYKAFYKE

Annotated regions:
Protein sequence:
MFSKYLVTASSLFVALTSAASTVDLDALLLLPGVESHDGVDTVFSTKDFYQVSFVKSIAPAIVNSSVIFHDVSRGVAMGNVKSRASIFNPEETYYDWEQYQVVNNGDWRTEWAPASDCIWREEKDNSDETPDRFPISVPYNWTSQYSIVDYDTDANEDNLDFRFIKSLLDKKNWLKKINQTVSQSSIMVAPMIRPYNVVQLWYSKDMVWANVQRQYCSGVYPGGTQCSAWSRYYHVDAPTCDEPVASYMTKMLENEVQCPNERNATTLEPLRLNKQGDSDFSLTFEEEEEEETGSKSLWSTLKKIFSKRSIS

Annotated regions:
Protein sequence:
MNLRVKQKIPLKIKRMGINGEGIGFYKRTLVFVPGALKGEEIFCQITSVKHNFVQARLLTINKKSKFRVRPACPIYEECGGCQIMHLRYDKQLDFKKDLLKQALKKFKPQGYETYDIRATIGMEHPQHYRAKLQFQTRKFGGSVRAGLFKEQSHHLVDIKDCLIQDELTQKIVNRVCQLLDDYNIPVYDERRHFAGVRTIMVRKSQATNQVQLIFVTSKEVNLVGIIRDLTGYFPEIKTVAVNFNSSKSSAIYGQKTEILWGIDSISEEVLDYSFSLSPRAFYQLNPQQTQVLYHQALQALDVTAEDHLIDAYCGVGSIGLAFANKVKSVRGMDIIPEAITDAKRNAERMGYTNTYYEMGKAENVIPKWYKDGYQASALIVDPPRTGLDEKLLKTLLTYQPEKMVYVSCNVSTLARDLVQLVKVYEVNYIQSVDMFPHTARTEAVVKLVKRKQNSCSKK

Annotated regions:
phrase: NLRVKQKIPLKIKRMGINGEGIGFYKRTLVFVPGALKGEEIFCQITSVKHNFVQARLL
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: DPPRTGLDEKLLKTLLTYQPEKMVYVSCNVS
type: ACTIVE_SITE
name: MeTrfase_TrmA_AS
description: RNA methyltransferase TrmA, active site

phrase: VKQKIPLKIKRMGINGEGIGFYKRTLVFVPGALKGEEIFCQITSVKHNFVQARL
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: VDMFPHTART
type: CONSERVED_SITE
name: MeTrfase_TrmA_CS
description: RNA methyltransferase TrmA, conserved site
Protein sequence:
MKRTVIMMLDSFGVGAAGDAAKFGDLGSDTFGHIAKACAEGKADIGREGPLTLPNLARLGLAHAAMESTGAFAPGFADDVELIGAYGHAQELSSGKDTPSGHWEMAGVPVLFDWGYFSEHQNSFPKELTDKILARAGLDGFLGNCHASGTTILEELGEEHMRSGKPIFYTSADSVFQIACHEGTFGLENLYRLCEIAREELEPYNIGRVIARPFDGTGPNDFARTGNRKDYSLEPPAKTVLDKLKAAGGEVVSVGKIADIYAYCGITKKVKANGLEALFDATLAEVKSAGENTIVFTNFVDFDSHYGHRRDVAGYAKGLEYFDSRLPEMLSLLDEDDLLILTADHGCDPTWQGTDHTREYVPVLAYGAGLKAGSLGRRNSFADIGQSIASYFKLEPMEYGESFI

Annotated regions:
phrase: KRTVIMMLDSFGVGAAGDAAKFGDLGSDTFGHIAKACAEGKADIGREGPLTLPNLARLGLAHAAMESTGAFAPGFADDVELIGAYGHAQELSSGKDTPSGHWEMAGVPVLFDWGYFSEHQNSFPKELTDKILARAGLDGFLGNCHASGTTILEELGEEHMRSGKPIFYTSADSVFQIACHEGTFGLENLYRLCEIAREELEPYNIGRVIARPFDGTGPNDFARTGNRKDYSLEPPAKTVLDKLKAAGGEVVSVGKIADIYAYCGITKKVKANGLEALFDATLAEVKSAGENTIVFTNFVDFDSHYGHRRDVAGYAKGLEYFDSRLPEMLSLLDEDDLLILTADHGCDPTWQGTDHTREYVPVLAYGAGLKAGSLGRRNSFADIGQSIASYFKL
type: DOMAIN
name: Metalloenzyme
description: Metalloenzyme
Protein sequence:
MGVQLKLDPNSKNWLRQPDQQPIQDSICTLPGPGSLLKKKIRKTEFRIDNGLLGNTSPIINVESKIPFHRRANSTPEESRKRVSFSLTSNDGAKSDRSSQKSSNSRKSIRSQSRSRSSSVGSDSQASIQSGTNSEVVSDDEEDGNFASIPELHEDNEYHSNLATSSNPFSDGSSSKSASLTASSAAASPTVSFSPASTSENLTPTSSKSLASNTSLVQSFNSASRSSSISGNQYTYNLLGKSTDESPKITISAGTSMSHFPSASSKLIQMRRHAHMNSEKCDPELLSHNEYFPMMKRGFISRFLCLFVSRDANVYIGPLESSHAKPYRPFGSFVSRFTNRVASDLESQIPDALEAVLTQNNDYDFNSFLHNMGYSRCYVDENYHITIHVSSYERRVEFMLAVCEAMMLYGSPSHKIQQSLRIASRILQLPATFLYLPDCMFVYFKKLEQYSPDVFVVRVTSQTDLNRMVLVNEIFRRVMRDKLSAEDGTEVLRNITSFRPLYRDWLVAFMHGVASASILPVVYGGGWRDMLIGFVLGLLLGIFRVYINPRFFLFDSLFEVIISIILSFLGRAFGSISRYDKPVFCFAALVEGAITLILPGYVVFCGVLELQSKNIVAGGVRMLYAVIFSLFLSFGITIGSALYGWMDKDATDADTCMSIIAVSPYWYILLIPIFTLSLLIVTQSHPRQWPIQMFVACCGYVVYYFSSLHFGASQISSAIGSFAVGCLGNMYSHFIKSSSFAVVLPAIFVLVPSGFAAQGGVSAGLDTASQITSKNTTTNTTTVTTENSQNSSLEFGFTMVEIAIGIAIGFLASSLTVYPFFGYRRKNMML

Annotated regions:
phrase: LLIPIFTLSLLIVTQSHPRQWPIQMFVACCGYVVYYFSSLHFGASQISSAIGSFAVGCLGNMYSHFIKSSSFAVVLPAIFVLVPSGFAAQGGVSAGLDTASQITSKNTTTNTTTVTTENSQNSSLEFGFTMVEIAIGIAIGFLASS
type: DOMAIN
name: ThrE_2
description: Threonine/Serine exporter, ThrE

phrase: FMLAVCEAMMLYGSPSHKIQQSLRIASRILQLPATFLYLPDCMFVYFKKLEQYSPDVFVVRVTSQTDLNRMVLVNEIFRRVMRDKLSAEDGTEVLRNITSFRPLYRDWLVAFMHGVASASILPVVYGGGWRDMLIGFVLGLLLGIFRVYINPRFFLFDSLFEVIISIILSFLGRAFGSISRYDKPVFCFAALVEGAITLILPGYVVFCGVLELQSKNIVAGGVRMLYAVIFSLFLSFGITIGSA
type: DOMAIN
name: ThrE-like_N
description: Threonine/serine exporter-like, N-terminal domain
Protein sequence:
MAEFPSKVNTRTSSPAQGGGAVVSTLSPDLGFVRSSLGALMLLQLVLGLLVWALIADTPYHLYPSYGWVMFVAVFLWLVTIIFFVLYLFQLHMKLYMVPWPLVLMVFNVGATVLYITAFITCSASVELTSLKGSQPYNQRAAASFFSCLVMIAYGVSAFLSFQAWRGVGSNAATSQMAGGYA

Annotated regions:
phrase: FVRSSLGALMLLQLVLGLLVWALIADTPYHLYPSYGWVMFVAVFLWLVTIIFFVLYLFQLHMKLYMVPWPLVLMVFNVGATVLYITAFITCSASVELTSLKGSQPYNQRAAASFFSCLVMIAYGVSAF
type: DOMAIN
name: Marvel
description: Marvel domain

phrase: FVRSSLGALMLLQLVLGLLVWALIADTPYHLYPSYGWVMFVAVFLWLVTIIFFVLYLFQLHMKLYMVPWPLVLMVFNVGATVLYITAFITCSASVELTSLKGSQPYNQRAAASFFSCLVMIAYGVSAFLSFQAW
type: DOMAIN
name: Marvel
description: Marvel domain
Protein sequence:
MKIVFATKNEGKVKEISEMLAGMNIELLSLNHFESLPEIVEDGATYLENALKKAEIISRFTGETVLADDSGLQVDILGGEPGIYSARYAGEGATDEENNRKLLDRLKDISGEKRTASFFCALVLYHPDGHYEAFEARWQGRIIDERRGTNGFGYDPIFLSPELNKTAAELPPEIKNTVSHRGQAFAKLKSHLSQSIHS

Annotated regions:
Protein sequence:
MSFATIETAIAEIAAGRPVVVVDDADRENEGDLIFAAEAATPELLAFMVRHTAGVVCVPLDPAEVDRLDLDQMVPQNTDRMGTAFTISVDARSGVTTGISAADRARTIRLLADPATQPGDLTRPGHIFPLRAKEGGVLRRPGHTEAAVDLARLAGLRPAGAICEIVNEDGSMARLPELTAFAREHGLALISIADLIAYRRRTEKQVVRVAEARIPTRYGSFRAVGYRGTLDGVEHIALIRGEVGDGENVLVRVHSECLTGDVFGSQRCDCGNQLDAALRAVAAEGRGVVLYVRGHEGRGIGLMHKLQAYQLQDAGHDTVDANLALGLPADARDYGTGAQILVDLGVRGLRLLSNNPTKRAGLEGYGLRIVEQVGLPVTHTPENLRYLTTKRDRMGHDLPGLPGLPDLPKVVGGDETAGAHEAHRWPVTAAPVADRADRACEEAR

Annotated regions:
phrase: RVAEARIPTRYGSFRAVGYRGTLDGVEHIALIRGEVGDGENVLVRVHSECLTGDVFGSQRCDCGNQLDAALRAVAAEGRGVVLYVRGHEGRGIGLMHKLQAYQLQDAGHDTVDANLALGLPADARDYGTGAQILVDLGVRGLRLLSNNPTKRAGLEGYGLRIVEQ
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MATGSVHSSSGNGRSQAATVVDEFTAPGDKKSLLERSRPRVQALFPVLFTVLGSLETFHQSEVKEDGEKPCRIWLQLKGGKQAVGRAKEYLKGICEPEMEEKQSYPKEMHCIFAGAQGSFLNHLIRDTYANVTVPDIGVLSMKGGTEPVVMAQSRVQQFIRLFNDNVSLPNHKEPAVKKKFKLYVEKHADKYTVDLLLLPSALKSELLSLACDDQLSGEDFSRQSSDDKVESQVNQKDEVSRNGAGTPVTELTSQLDSVFSSVAEDSPCLMERPYSEQDRLSVKRRSSEAEERFSKKPFSLEAVQVDGPVNRNADTNNVPIIDLISEPSDFEDSVILVEADDNVSSETEYKILVNFFKTMGYSQNVVEKVIGDLGQSEEPLKLLEEIEKQSKKELYSHPSSNSTELLKARGTSNLPKCKIAIAEPVQQSAAPLKTQCKALLATDKAGPSNSSHDKSQTKATVANTIPQDQKTTIAPTERPLNKHSDPPLTGVQIFQNSLKVEYRLELKNEPGKLDLKHIIIDGSNVAMSHGLKHFFSCRGIALAVEYFWNKGHRNITVFVPQWRTKRDPYITEQHFLQQLQELGILSFTPSRTVLGARIASHDDRFLLHLAERTGGIIVTNDNFREFVVESPMWREIIKERLLQYTFAGDIFMLPDDPLGRYGPKLDDFLSKQPINRTMHSSSPSSNEMFIPRDHFAPPRAMAPRNGLNQPMTQRNGLSQPMAPRTELNQHMAPRTGLNQHMAPRNALRQPMAPKTGLSQPIAPRTGLDESSLFQLIKPQEPFPPAVHNIARPRPIIPPQRSPSETMELREALLKIFPETDQRHKINEILSAHPYMRDLNALSAMVLD

Annotated regions:
phrase: LKHIIIDGSNVAMSHGLKHFFSCRGIALAVEYFWNKGHRNITVFVPQWRTKRDPYITEQHFLQQLQELGILSFTPSRTVLGARIASHDDRFLLHLAERTGGIIVTNDNFREFVVESPMWREIIKERLLQYTFAGDIFMLPDDPLGRYGPKLD
type: DOMAIN
name: RNase_Zc3h12_NYN
description: Ribonuclease Zc3h12a-like, NYN domain

phrase: DEFTAPGDKKSLLERSRPRVQALFPVLFTVLGSLETFHQSEVKEDGEKPCRIWLQLKGGKQAVGRAKEYLKGIC
type: DOMAIN
name: KH_N4BP1_1st
description: N4BP1, first type I KH-domain

phrase: EYKILVNFFKTMGYSQNVVEKVIGDLGQSEEPLKLLEEIE
type: DOMAIN
name: UBA_N4BP1
description: N4BP1, UBA-like domain

phrase: QRSPSETMELREALLKIFPETDQRHKINEILSAHPYMRDLNALSAMVL
type: DOMAIN
name: UBA_N4BP1_C
description: N4BP1, C-terminal UBA domain

phrase: PEMEEKQSYPKEMHCIFAGAQGSFLNHLIRDTYANVTVPDIGVLSMKGGTEPVVMAQSRVQQFIRLFNDNVSLPNHKEPAVKKKFKLYVEKHADKYTVDLLLLPSALKSELLSL
type: DOMAIN
name: KH_N4BP1_2nd
description: N4BP1, second type I KH-domain

phrase: DEFTAPGDKKSLLERSRPRVQALFPVLFTVLGSLETFHQSEVKEDGEKPCRIWLQLKGGKQAVGRAKEYLKGI
type: DOMAIN
name: KH_N4BP1_1st
description: N4BP1, first type I KH-domain
Protein sequence:
MPFIVNTASERDEMLKAIGVSSFDDLLVAIPEEIRLKRALDLFPASDEPQVRKLLEGLASANKSTADYVSFLGGGAYDHFIPAAIKTITSRSEFYTAYTPYQAEVSQGTLQAIYEYQSLVCRLYEMDVANASMYDGATALAEAVLMAMNVTGRSKVVVAGKLHPYNSSVLKTYLEAAGHHAVIQNTLEEGVGSIDALKELVGASVAAVVVQQPNFYGSLEDVEAIGAIAHENGALFVVSADPLSLGMLAAPGSYGADIAVGEGQPLGTPQSFGGPYLGIFTVKQQLVRKIPGRLVGMTKDRDGEDGFILTLQTREQHIRREKATSNICSNQALNALQAAIYLSLLGKEGLQQVATQSAQKAHYLAGKIAAIPGFSLKYKAPFFREFVVETPIPAAAVIERMLEHKLFAGHDLAVHGETGLLVAVTEKRTKAELDSFVDKLEGITGI

Annotated regions:
phrase: FIVNTASERDEMLKAIGVSSFDDLLVAIPEEIRLKRALDLFPASDEPQVRKLLEGLASANKSTADYVSFLGGGAYDHFIPAAIKTITSRSEFYTAYTPYQAEVSQGTLQAIYEYQSLVCRLYEMDVANASMYDGATALAEAVLMAMNVTGRSKVVVAGKLHPYNSSVLKTYLEAAGHHAVIQNTLEEGVGSIDALKELVGASVAAVVVQQPNFYGSLEDVEAIGAIAHENGALFVVSADPLSLGMLAAPGSYGADIAVGEGQPLGTPQSFGGPYLGIFTVKQQLVRKIPGRLVGMTKDRDGEDGFILTLQTREQHIRREKATSNICSNQALNALQAAIYLSLLGKEGLQQVATQSAQKAHYLAGKIAAIPGFSLKYKAPFFREFVVETPIPAAAVIERMLEHKLFAGHDLAVHGETGLLVAVTEKRTKAELDSFV
type: DOMAIN
name: GDC-P_N
description: Glycine cleavage system P-protein, N-terminal domain
Protein sequence:
MVYKLVLLFCIASLGYSVEYKNTICPPRQDYRYWYFAAELTIGVNYDINSTIIGECYMSESYIDRNANIVLTGYGLEINMTIMDTDQRFVAAAEGVGKDNKLSVMLFTTQRLDKVHHNISVIITCMEMNCGTTKYNSDLPESIHHKSSCDITINGSCVTCVNLETDPTKINPHYLHPKDKYLYHNSKYGMRGSYGVTFIDELNQCLLDIKELSYDICYRE

Annotated regions:
Protein sequence:
MANAPHGGVLKDLLARDAPIAAQLLQESAKLPEIVLSERQLCDLELIINGGFSPLEGFMTKPDYDGCLDNMRLADGSLFPMPITLDVDQAQIDALALAPGARVTLRDPRDENAIAILTVADLYPVDKVREAVSVFGSDDVAHPAIAYLRSSVKQFYVGGNVQAISKPSYYDYVALRYTPAELRQHFAKIAWRKVVAFQTRNPMHRAHRELTVRAARQRQANVLIHPVVGMTKPGDVDHYTRVRVYQSLMPRYPNGMATLALLPLAMRMGGPREALWHAIIRKNFGVTHFIVGRDHAGPGKNSQGVDFYGPYDAQTLVTQHTAELGIEMVPFQMMTYLPGTDEYQPIDEVPKGTPTLDISGTELRRRLKTGAAIPDWFSYESVVKTLRESYPPKAQQGFTLFLTGLHNSGKDQIARALQVKLNEQGGRSVSLLLGETVRSELSSELGFSAEDRHKNIQRIGFVAAELTRAGAAVIAAPIAPYARSRAAARDVITKTGGAGNYFLIHVATPLEFCEATDRKGSYARARAGEIKGFTGVDDVYEAPTDADLVVDISTQSVAEITHSIVLLLEAQGLI

Annotated regions:
phrase: LRYTPAELRQHFAKIAWRKVVAFQTRNPMHRAHRELTVRAARQRQANVLIHPVVGMTKPGDVDHYTRVRVYQSLMPRYPNGMATLALLPLAMRMGGPREALWHAIIRKNFGVTHFIVGRDHAGPGKNSQGVDFYGPYDAQTLVTQHTAELGIEMVPFQMMTYLPGTDEYQPIDEVPKGTPTLDISGTELRRRLKTGAAIPDWFSYESVVKTLR
type: DOMAIN
name: Sulfurylase_cat_dom
description: Sulphate adenylyltransferase catalytic domain

phrase: APHGGVLKDLLARDAPIAAQLLQESAKLPEIVLSERQLCDLELIINGGFSPLEGFMTKPDYDGCLDNMRLADGSLFPMPITLDVDQAQIDALALAPGARVTLRDPRDENAIAILTVADLYPVDKVREAVSVFGSDDVAHPAIAYLRSSVKQFYVGGNVQAI
type: DOMAIN
name: ATP-Sase_PUA-like_dom
description: ATP-sulfurylase PUA-like domain
Protein sequence:
MDWAEKYRPMHLADILGNGSAVRQIVDWAKTWTPDSRPLLFTGKPGIGKTSAALALARDMDWEVLELNASDARTKTIIERVAGNSSTTTSLFGAGRKLIIIDEVDNLEGNADRGGARAIADILKEAKQPIVLIANDAYGVSDSIRRLCDPVPFRAIGVSTLQKRMKEICRFEDIACGEDALSAIAESSAGDMRTAVNMLFGSSTGKTSISVGDINTAQKDERATIFDLVGGVFAGAPDRELQKLSFECDEKPDSVMQWIEESIPLMHDPKRRIRAYGRISRADVYLGRTMRRQYFTLWRYATSMMTLGVASENAGAGFRTRIMPPSRWKRMSTAKKQKTVRRTLAASLAEGYSIPERQIQSEYLDLLSRFAEKDPAAFCERHNLDVDQMGIILHDKAAAAAAVKTVQQAAKERDMKVKKMAASKKAEMRKLEEQLEALRMQEPPVPETPPAAEEQPLEEPQEEKKLAPKQATLDFF

Annotated regions:
phrase: LLFTGKPGIGKTSAALALARDMDWEVLELNASDARTKTIIERVAGNSSTTTSLFGAGRKLIIIDEVDNLEGNADRGGARAIADILKEA
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: IGVSTLQKRMKEICRFEDIACGEDALSAIAESSAGDMRTAVNMLFGSSTGKTSISVGD
type: DOMAIN
name: RFC_lid
description: Replication factor C, lid domain

phrase: DSRPLLFTGKPGIGKTSAALALARDMDWEVLELNASDARTKTIIERVAGNSSTTTSLFGAGRKLIIIDEVDNLEGNADRGGARAIADILKEAKQPIVLIANDAYGVSDSIRRLCDPVPFRAI
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain