nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MKISRRDFIKQTAITATASVAGVTLPAGAANFVTDSEVTKLKWSKAPCRFCGTGCGVTVAVKDNKVVATQGDPQAEVNKGLNCVKGYFLSKIMYGQDRLTRPLMRMKNGKYDKNGDFAPVTWDQAFDEMERQFKRVLKEKGPTAVGMFGSGQWTVWEGYAAAKLYKAGFRSNNIDPNARHCMASAAAGFMRTFGMDEPMGCYDDFEAADAFVLWGSNMAEMHPILWTRVTDRRLSHPKTRVVVLSTFTHRCFDLADIGIIFKPQTDLAMLNYIANYIIRNNKVNKDFVNKHTVFKEGVTDIGYGLRPDHPLQKAAKNASDPGAAKVITFDEFAKFVSKYDADYVSKLSAVPKAKLDQLAELYADPNIKVMSLWTMGFNQHTRGTWANNMVYNLHLLTGKIATPGNSPFSLTGQPSACGTAREVGTFSHRLPADMVVTNPKHREEAERIWKLPPGTIPDKPGYDAVLQNRMLKDGKLNAYWVQVNNNMQAAANLMEEGLPGYRNPANFIVVSDAYPTVTALAADLVLPSAMWVEKEGAYGNAERRTQFWHQLVDAPGEARSDLWQLVEFAKRFKVEEVWPPELIAKKPEYKGKTLYDVLYRNGQVDKFPLKDVNAEYHNAEAKAFGFYLQKGLFEEYATFGRGHGHDLAPFDAYHEARGLRWPVVNGKETRWRYREGSDPYVKAGTGFQFYGNPDGKAVIFALPYEPPAESPDKEYPYWLVTGRVLEHWHSGSMTRRVPELYRSFPNAVVFMHPEDAKALGLRRGVEVEVVSRRGRMRSRIETRGRDAPPRGLVFVPWFDASQLINKVTLDATCPISLQTDFKKCAVKIVKV

Annotated regions:
phrase: EYPYWLVTGRVLEHWHSGSMTRRVPELYRSFPNAVVFMHPEDAKALGLRRGVEVEVVSRRGRMRSRIETRGRDAPPRGLVFVPWFDASQLINKVTLDATCPISLQTDFKKCAVKIVK
type: DOMAIN
name: CT_Nitrate-R-NapA-like
description: Nitrate reductase NapA-like, molybdopterin-binding domain

phrase: KWSKAPCRFCGTGCGVTVAVKDNKVVATQGDPQAEVNKGLNCVKGYFLSKIM
type: DOMAIN
name: Mopterin_OxRdtase_4Fe-4S_dom
description: Molybdopterin oxidoreductase, 4Fe-4S domain

phrase: LKWSKAPCRFCGTGCGVTVAVKDNKVVATQGDPQAEVNKGLNCVKGYFLSKIMY
type: DOMAIN
name: Mopterin_OxRdtase_4Fe-4S_dom
description: Molybdopterin oxidoreductase, 4Fe-4S domain

phrase: ISRRDFIKQTAITATASVAGVTL
type: CONSERVED_SITE
name: TAT_signal_bac_arc
description: Twin-arginine translocation pathway, signal sequence, bacterial/archaeal

phrase: LKWSKAPCRFCGTGCGVTVAVKDNKVVATQGDPQAEVNKGLNCVKGYFLSKIMYGQ
type: DOMAIN
name: Mopterin_OxRdtase_4Fe-4S_dom
description: Molybdopterin oxidoreductase, 4Fe-4S domain

phrase: MKISRRDFIKQTAITATASVAGVTLPAG
type: CONSERVED_SITE
name: TAT_signal
description: Twin-arginine translocation pathway, signal sequence

phrase: YWLVTGRVLEHWHSGSMTRRVPELYRSFPNAVVFMHPEDAKALGLRRGVEVEVVSRRGRMRSRIETRGRDAPPRGLVFVPWFDASQLINKVTLDATCPISLQTDFKKC
type: DOMAIN
name: MoPterin_dinucl-bd_dom
description: Molybdopterin dinucleotide-binding domain

phrase: RLTRPLMRMKNGKYDKNGDFAPVTWDQAFDEMERQFKRVLKEKGPTAVGMFGSGQWTVWEGYAAAKLYKAGFRSNNIDPNARHCMASAAAGFMRTFGMDEPMGCYDDFEAADAFVLWGSNMAEMHPILWTRVTDRRLSHPKTRVVVLSTFTHRCFDLADIGIIFKPQTDLAMLNYIANYIIRNNKVNKDFVNKHTVFKEGVTDIGYGLRPDHPLQKAAKNASDPGAAKVITFDEFAKFVSKYDADYVSKLSAVPKAKLDQLAELYADPNIKVMSLWTMGFNQHTRGTWANNMVYNLHLLTGKIATPGNSPFSLTGQPSACGTAREVGTFSHRLPADMVVTNPKHREEAERIWKLPPGTIPDKPGYDAVLQNRMLKDGKLNAYWVQVNNNMQAAANLMEEGLPGYRNPANFIVVSDAYPTVTALAADLVLPSAMWVEKEGAYGNAERRTQFWHQLVDAPGEARSDLWQLVEFAK
type: DOMAIN
name: Mopterin_OxRdtase
description: Molybdopterin oxidoreductase

phrase: APCRFCGTGCGVTVAVKD
type: BINDING_SITE
name: MopterinOxRdtase_cofactor_BS
description: Molybdopterin oxidoreductase, molybdopterin cofactor binding site
Protein sequence:
MLHCNKWILRITLWYLKLNKPLLIDHSFEDWDWEGVPNFRMEQVRDWIFEKGQLDWGKMSNLPKSLNEKLTERYDLVPMKIMRVQGSKDTTQKFLWRLRDHQLIESVLIRANQDTLGNRSSRLTLCVSTQVGCALGCKFCASGLDGLKRNLTTGEIVGQILLARKEAGRRIDNLVFMGMGEPLANLRALLPALDQILSPRGLGIGARHLTLSTSGLVPKILELAKYPAQIRLAISLHGGDNETRRKIMPINDRYPIEELFKACEKFIEKRRKMITLEYILIENLNDDLQQAELLATHARRLNAKINLIPYNQVDGLEWRRPTLPRIRAFQKKVEQGKAPKVTLRMEKGHDIEAACGQLRLQESSNLS

Annotated regions:
phrase: STQVGCALGCKFCASGLDGLKRNLTTGEIVGQILLARKEAGRRIDNLVFMGMGEPLANLRALLPALDQILSPRGLGIGARHLTLSTSGLVPKILELAKYPAQIRLAISLHGGDNETRRKIMPINDRYPIEELFKACEKFIEKRRKMITLEYILIENLND
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: RSSRLTLCVSTQVGCALGCKFCASGLDGLKRNLTTGEIVGQILLARKEAGRRIDNLVFMGMGEPLANLRALLPALDQILSPRGLGIGARHLTLSTSGLVPKILELAKYPAQIRLAISLHGGDNETRRKIMPINDRYPIEELFKACEKFIEKRRKMITLEYILIENLNDDLQQAELLATHARRLNAKINLIPYNQVDGLEWRRPTLPRIRAFQKKVEQGKAPKVTLRMEKGH
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LTLCVSTQVGCALGCKFCASGLDGLKRNLTTGEIVGQILLARKEAGRRIDNLVFMGMGEPLANLRALLPALDQILSPRGLGIGARHLTLSTSGLVPKILELAKYPAQIRLAISLHGGDNETRRKIMPINDRYPIEELFKACEKFIEKRRKMITLEYILIENLNDDLQQAELLATHARRLNAKINLIPYNQVDGLEWRRPTLPRIRAFQKKVE
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: EGVPNFRMEQVRDWIFEKGQLDWGKMSNLPKSLNEKLTERYDLVPMKIMRVQGSKDTTQKFLWRLRDHQLIESVLIRANQDTLGNRSSRLTLCVSTQVGCALGCKFCASGLDGLKRNLTTGEIVGQILLARKEAGRRIDNLVFMGMGEPLANLRALLPALDQILSPRGLGIGARHLTLSTSGLVPKILELAKYPAQIRLAISLHGGDNETRRKIMPINDRYPIEELFKACEKFIEKRRKMITLEYILIENLNDDLQQAELLATHARRLNAKINLIPYNQVDGLEWRRPTLPRIRAFQKKVEQGKAPKVTLRMEKGHDIEAACGQLRLQES
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: PNFRMEQVRDWIFEKGQLDWGKMSNLPKSLNEKLTE
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MILSIESSCDDSSIAITRIKDYKLLFHKKISQELAHSEYGGVVPELASRLHAEALPKILEEAKEFLPQIKAIAVTNEPGLSVTLLEGIMMAKALHLALNVPLIGVNHLIGHVYSLFIEKEAVLPKMVLLVSGGHTMILDVKGYKDIKVLATTLDDSFGESFDKVAKMMGLGYPGGPVIEKLAQKGDANRFDFPIPLKNAKELAFSYSGLKNAVRLALSEMENLSEQDMADIAASFQKAAIAHLLQKTKKACEIYKPSDFAIVGGASANMALRKAFEQECAKRAIPIAFAKLEYCSDNAAMIGRAAVEAFLMNDFTDMDALVAIPRSCFV

Annotated regions:
phrase: KALHLALNVPLIGVNHLIGH
type: CONSERVED_SITE
name: Peptidase_M22_CS
description: Peptidase M22, conserved site

phrase: LLFHKKISQELAHSEYGGVVPELASRLHAEALPKILEEAKEFLPQIKAIAVTNEPGLSVTLLEGIMMAKALHLALNVPLIGVNHLIGHVYSLFIEKEAVLPKMVLLVSGGHTMILDVKGYKDIKVLATTLDDSFGESFDKVAKMMGLGYPGGPVIEKLAQKGDANRFDFPIPLKNAKELAFSYSGLKNAVRLALSEMENLSEQDMADIAASFQKAAIAHLLQKTKKACEIYKPSDFAIVGGASANMALRKAFEQECAKRAIPIAFAKLEYCSDNAAMI
type: DOMAIN
name: Gcp-like_dom
description: Gcp-like domain

phrase: MILSIESSCDDSSIAITRIKDYKLLFHKKISQELAHSEYGGVVPELASRLHAEALPKILEEAKEFLPQIKAIAVTNEPGLSVTLLEGIMMAKALHLALNVPLIGVNHLIGHVYSLFIEKEAVLPKMVLLVSGGHTMILDVKGYKDIKVLATTLDDSFGESFDKVAKMMGLGYPGGPVIEKLAQKGDANRFDFPIPLKNAKELAFSYSGLKNAVRLALSEMENLSEQDMADIAASFQKAAIAHLLQKTKKACEIYKPSDFAIVGGASANMALRKAFEQECAKRAIPIAFAKLEYCSDNAAMIGRAAVEAFLMNDFTDM
type: DOMAIN
name: Gcp-like_dom
description: Gcp-like domain
Protein sequence:
MTDPLSRAGLVIVDKPAGMTSHDVVSRCRRIFSTRKVGHAGTLDPMATGVLVIGIERATKIMGLLTLTTKSYAATIRFGQSTSTDDAEGEVLQTISASHLTEVDIEAAVAGLRGDIAQVPSSVSAIKVDGQRAYKLAREGQSVELAARPVRISRFDVLAVRGSGEDLIDVDVEIDCSSGTYIRALARDAGAALGVGGHLTALRRTRVGDFGLDRARTLEELADGATLTLDLDSACRQGFPRRDLDAAEVDAVRNGRPLAPAGIEGTYAAVDADDRVIALLADKGSRTTSVVVLRPANL

Annotated regions:
phrase: RALARDAGAALGVGGHLTALRRTRVGDFGLDRARTLEELADG
type: DOMAIN
name: TruB_C
description: tRNA pseudouridylate synthase B, C-terminal

phrase: FPRRDLDAAEVDAVRNGRPLAPAGIEGTYAAVDADDRVIALLADKGSRTTSVVVL
type: DOMAIN
name: tRNA_psdUridine_synth_fam2_C
description: tRNA pseudouridine synthase II, TruB, subfamily 2, C-terminal

phrase: RRIFSTRKVGHAGTLDPMATGVLVIGIERATKIMGLLTLTTKSYAATIRFGQSTSTDDAEGEVLQTISASHLTEVDIEAAVAGLRGDIAQVPSSVSAIKVDGQRAYKLAREGQSVELAARPVRISRFDVLAVRGSGEDLIDVDVEIDCSSGTY
type: DOMAIN
name: PsdUridine_synth_N
description: Pseudouridine synthase II, N-terminal
Protein sequence:
MGVFDPTLLILLALAALGIISQNMTVTLAILFLVAVRITPLNHYFPWVEKYGLSFGVLVLTIGVMAPIASGKISAGDVLSSFLHWKSLMAVAIGVAVSWLGGRGVVLMSNQPSVVAGLLVGTVMGVALFRGVPVGPLIAAGLLSLLIGKG

Annotated regions:
Protein sequence:
MAAERSFIAIKPDGVQRGLVGEILGRFERKGFKLVGLKQLTPSRELAEQHYGVHKERPFFGGLVDFITSGPVVAMVWEGDGVITSARKMIGATKPLEAEPGTIRGDLAINIGRNVIHGSDAPETAEFEIGLWFNPSELSDWTPSDQTWRVEG

Annotated regions:
phrase: AERSFIAIKPDGVQRGLVGEILGRFERKGFKLVGLKQLTPSRELAEQHYGVHKERPFFGGLVDFITSGPVVAMVWEGDGVITSARKMIGATKPLEAEPGTIRGDLAINIGRNVIHGSDAPETAEFEIGLWFNPSELS
type: DOMAIN
name: NDK-like_dom
description: Nucleoside diphosphate kinase-like domain

phrase: NVIHGSDA
type: ACTIVE_SITE
name: Nucleoside_diP_kinase_AS
description: Nucleoside diphosphate kinase, active site

phrase: ERSFIAIKPDGVQRGLVGEILGRFERKGFKLVGLKQLTPSRELAEQHYGVHKERPFFGGLVDFITSGPVVAMVWEGDGVITSARKMIGATKPLEAEPGTIRGDLAINIGRNVIHGSDAPETAEFEIGLWFNPS
type: DOMAIN
name: NDK-like_dom
description: Nucleoside diphosphate kinase-like domain
Protein sequence:
MTNNSKICLVSLICISGIYFGYQYYQNSKPVITIYPDNLPPKIRPSIIENNQVASVYSNIYENLITQDTNIQTVKLLPDPEQPMIIDSRNQSQNDKIFDRMSTLIPLIESNNNAKNATDLNIIKLEKVIKDKVSNAQNCRSNAGYKVQLGSVKSEAEAMAEGAKIKKKFPKILKNVVITTKKVKYDDGKFFYLILAGEYSSLSQAQAVCKKLAYNKQSCVLK

Annotated regions:
phrase: CRSNAGYKVQLGSVKSEAEAMAEGAKIKKKFPKILKNVVITTKKVKYDDGKFFYLILAGEYSSLSQAQAVCKKLAYNKQSCVL
type: DOMAIN
name: SPOR-like_dom
description: Sporulation-like domain

phrase: NAGYKVQLGSVKSEAEAMAEGAKIKKKFPKILKNVVITTKKVKYDDGKFFYLILAGEYSSLSQAQAVCKKLAYNKQSC
type: DOMAIN
name: SPOR-like_dom
description: Sporulation-like domain
Protein sequence:
MKLLPREIEKLELHQAGFLAQKRLARGIRLNYTEAVALIATQILEFIRDGDKSVAELMDIGRQLLGRRQVLPAVLHLLYTVQVEGTFRDGTKLVTVHEPISLENGNLELALHGSFLPVPSLDKFPEVHEGVIIPGDMKYGDGSIIINHGRKAVVLKVVNTGDRPVQVGSHYHFIEVNPLLVFDRRKALGMRLNIPAGTAVRFEPGERKSVVLVNIGGNKVIRGGNGIVDGLVDDVNWTVLMETMERRGFKHLEDIDASEGIAGEDPRFTTMISREKYANMYGPTTGDKLRLGDTNLYARIEKDYTVYGDECVFGGGKVLREGMGQGIEQAEALSLDTVITNSVIIDYSGIYKADIGIKNGHIVGIGKAGNPDTMHGVQNNMLIGNKTEVIAGEGMIVTAGAIDCHVHFICPQLVYEAVSSGITTMVGGGTGPAYGTRATTCTPSPFDMKLMLQSTDSLPLNFGFTGKGNTAKPLELRHIVEAGAMGLKLHEDWGTTPAAIDNCLAVAEEYDIQVNIHTDTLNESGFVEHTINAFRGRTIHTYHSEGAGGGHAPDIIRVCGVKNVLPSSTNPTRPYTKNTVDEHLDMLMVCHHLDKNIPEDVAFAESRIRAETIAAEDILHDMGAISIISSDSQAMGRIGEVISRTWQTADKMKAQRGAIDPNMADDDNSRIKRYIAKYTINPAIANGFADLIGSVEVKKLADLVIWQPAFFGAKPEMIIKGGNIAWANMGDANASIPTPEPVISRPMFGAFGKAGSENSVAFVSKAALRKGVKELYGLKKRVVAVSNVRQLTKLDMKLNDALPEITVDPETYVVTANGEVLTCAPADSVPLSRNYFLF

Annotated regions:
phrase: IVTAGAIDCHVHFICPQLVYEAVSSGITTMVGGGTGPAYGTRATTCTPSPFDMKLMLQSTDSLPLNFGFTGKGNTAKPLELRHIVEAGAMGLKLHEDWGTTPAAIDNCLAVAEEYDIQVNIHTDTLNESGFVEHTINAFRGRTIHTYHSEGAGGGHAPDIIRVCGVKNVLPSSTNPTRPYTKNTVDEHLDMLMVCHHLDKNIPEDVAFAESRIRAETIAAEDILHDMGAISIISSDSQAMGRIGEVISRTWQTADKMKAQRGAIDPNMADDDNSRIKRYIAKYTINPAIANGFADLIGSVEVKKLADLVIWQPAFFGAKPEMIIKG
type: DOMAIN
name: Amidohydro-rel
description: Amidohydrolase-related

phrase: TAGAIDCHVHFIC
type: BINDING_SITE
name: Urease_Ni-bd
description: Urease nickel binding site

phrase: VDDVNWTVLMETMERRGFKHLEDIDASEGIAGE
type: DOMAIN
name: Urease_linker
description: Urease subunit beta-alpha, linker domain

phrase: GAIDCHVHFICPQLVYEAVSSGITTMVGGGTGPAYGTRATTCTPSPFDMKLMLQSTDSLPLNFGFTGKGNTAKPLELRHIVEAGAMGLKLHEDWGTTPAAIDNCLAVAEEYDIQVNIHTDTLNESGFVEHTINAFRGRTIHTYHSEGAGGGHAPDIIRVCGVKNVLPSSTNPTRPYTKNTVDEHLDMLMVCHHLDKNIPEDVAFAESRIRAETIAAEDILHDMGAISIISSDSQAMGRIGEVISRTWQTADKMKAQRGAIDPNMADDDNSRIKRYIAKYTINPAIANGFADLIGSVEVKKLADLVIWQPAFFGAKPEMIIKGGNIAWANMGDANASIPTPEPVISRPMFGAFGKAGSENSVAFVSKAALRKGVKELYGLKKRVVAVSNVRQLTKLDMKLNDALPEITVDPETYVVTANGEVLTCAPADSVPLSRNYFL
type: DOMAIN
name: Urease_asu_c
description: Urease alpha subunit, C-terminal

phrase: MVCHHLDKNIPEDVAF
type: ACTIVE_SITE
name: Urease_AS
description: Urease active site

phrase: MISREKYANMYGPTTGDKLRLGDTNLYARIEKDYTVYGDECVFGGGKVLREGMGQGIEQAEALSLDTVITNSVIIDYSGIYKADIGIKNGHIVGIGKAGNPDTMHGVQNNMLIGNKTEV
type: DOMAIN
name: Urease_alpha_N_dom
description: Urease alpha-subunit, N-terminal domain
Protein sequence:
MSEQFLYFLQQMFNGVTLGSTYALIAIGYTMVYGIIGMINFAHGEVYMIGSYVSFMIIAALMMMGIDTSWLLVAAGFIGAIIIASAYGWSIERVAYRPVRNSKRLIALISAIGMSIFLQNYVSLTEGSRDVALPSLFNGQWIVGSSENFSASITTMQAVIWIVTFLAMLALTIFIRYSRMGRACRACAEDLKMASLLGINTDRVIALTFVIGAAMAAVAGVLLGQFYGVINPYIGFMAGMKAFTAAVLGGIGSIPGAMIGGLILGVAEALSSAYLSTEYKDVVSFALLILVLLVMPTGILGRPEVEKV

Annotated regions:
Protein sequence:
MAGGPRRGGRRRKKVCYFTANGITHIDYKDTELLKRFISERGKILPRRVTGTSAKYQRMLTTAIKRSRHMALLPYVKEEQ

Annotated regions:
phrase: IDYKDTELLKRFISERGKILPRR
type: CONSERVED_SITE
name: Ribosomal_bS18_CS
description: Small ribosomal subunit protein bS18, conserved site
Protein sequence:
MENLFELHADVRVEQGKGASRRLRRAGKVPAVLYGAAKEPISLLFDHNLLFRHLSHDAFYSHILTIHANGKAERVVLKALQRDPVNPNKVLHLDLQRVSSTQKLTIKVPLHFIGDEMAPGVKQEGGTVARLLNDIEISCLAKDLPEYIEVDLADLGVGETVHLSDLKLPGGVEIPALKLGEDYDQPVVTIHKPRAAAEEEDTGAEGDVEAADAE

Annotated regions:
phrase: ELHADVRVEQGKGASRRLRRAGKVPAVLYGAAKEPISLLFDHNLLFRHLSHDAFYSHILTIHANGKAERVVLKALQRDPVNPNKVLHLDLQ
type: DOMAIN
name: Ribosomal_L25_dom
description: Large ribosomal subunit protein bL25, L25 domain

phrase: KLTIKVPLHFIGDEMAPGVKQEGGTVARLLNDIEISCLAKDLPEYIEVDLADLGVGETVHLSDLKLPGGVEIPALKLGEDYDQPVVTIHKP
type: DOMAIN
name: Ribosomal_bL25_b-dom
description: Large ribosomal subunit protein bL25, beta domain

phrase: LHADVRVEQGKGASRRLRRAGKVPAVLYGAAKEPISLLFDHNLLFRHLSHDAFYSHILTIHANGKAERVVLKALQRDPVNPNKVLHLD
type: DOMAIN
name: Ribosomal_L25_dom
description: Large ribosomal subunit protein bL25, L25 domain
Protein sequence:
MKKKHRIKKNDEFQAVFQKGKSNANRQFVVYQLDKEEQPNFRIGLSVSKKIGNAVVRNRIKRMVRQAITELKDEIDSGKDFVIIARKPCAEMTYEEVKKSLIHVFKRSGMKRIKK

Annotated regions:
phrase: IGNAVVRNRIKRMV
type: CONSERVED_SITE
name: RNase_P_CS
description: Ribonuclease P, conserved site
Protein sequence:
MAGGVTGGGSATWSDRFEQGLHPAIERFNASIGFDITLLQEDLDGSMAHARMLAQCGVISEAEADQLCGGLEQIRAEAAEGRFQPGLDDEDVHFAVERRLIALLGPVGKKLHTGRSRNDQVGTDLRLWLRRRIDELIPQVKTFQRALLRQALSHRRTLIPGYTHLQRAQPVCLAHHLLAYVEMLERDRQRLEDVRKRVNVSPLGAAALAGTPVPIDRRSTAAALGFDGLYANSLDAVSDRDFAVEFSAAISLVMVHLSRLGEEVIFWASEECGFVRLSDRCATGSSLMPQKKNPDVPELVRGKCGRVFGHLQGLLTMIKGLPLAYNKDFQEDKEALFDVVSTGSQCLEAMTILMDEGLSFREDRLEAAVAADFSNATDVADYLVARQVPFREAYQIVGSVVKQCLSEGVLLRDLSLERWQSFHPAIESDLYDALAPRQVVAARTSEGGTGFDRVEEQLSAWSERLDLANG

Annotated regions:
phrase: GSSLMPQKK
type: CONSERVED_SITE
name: Fumarate_lyase_CS
description: Fumarate lyase, conserved site

phrase: FSNATDVADYLVARQVPFREAYQIVGSVVKQCLSEGVLLRDLSLERWQSFHPAIESDLYDALAPRQVV
type: DOMAIN
name: Arg_succ_lyase_C
description: Argininosuccinate lyase, C-terminal

phrase: FEQGLHPAIERFNASIGFDITLLQEDLDGSMAHARMLAQCGVISEAEADQLCGGLEQIRAEAAEGRFQPGLDDEDVHFAVERRLIALLGPVGKKLHTGRSRNDQVGTDLRLWLRRRIDELIPQVKTFQRALLRQALSHRRTLIPGYTHLQRAQPVCLAHHLLAYVEMLERDRQRLEDVRKRVNVSPLGAAALAGTPVPIDRRSTAAALGFDGLYANSLDAVSDRDFAVEFSAAISLVMVHLSRLGEEVIFWASEECGFVRLSDRCATGSSLMPQKKNPDVPELVRGKCGRVF
type: DOMAIN
name: Fumarate_lyase_N
description: Fumarate lyase, N-terminal
Protein sequence:
MDASTLFTRLETATASFRNLERQLADPDVAADPKRLESIARERSRLEPLVLDFEELQRLESERDSARQLLKDSRGDAAMEELAQDELASLQEQHATLTERLTLALLPRDPRDERSVMLEIRAGAGGDEACLWAGDLARMYERYSQKVGWAVQSISCTEADLGGFRELILSVRGDSVYSQLKFEAGVHRVQRVPATESQGRVHTSTATVAVMPEADAVEVQLDPKDLDISTARSGGAGGQNVNKVETAVDLLHKPTGIRVFCTQERSQLQNRERALEILRAKLLEREQAAAAERESSDRRAQVGSGDRSEKIRTYNYKDNRTTDHRLGRNFTLEPVLEGQLEDLIGACIAEEQRQKLEALSDQAEA

Annotated regions:
phrase: QLLKDSRGDAAMEELAQDELASLQEQHATLTERLTLALLPRDPRDERSVMLEIRAGAGGDEACLWAGDLARMYERYSQKVGWAVQSISCTEADLGGFRELILSVRGDSVYSQLKF
type: DOMAIN
name: PCRF
description: Peptide chain release factor

phrase: RSGGAGGQNVNKVETA
type: DOMAIN
name: Pep_chain_release_fac_I
description: Peptide chain release factor class I

phrase: AVEVQLDPKDLDISTARSGGAGGQNVNKVETAVDLLHKPTGIRVFCTQERSQLQNRERALEILRAKLLEREQAAAAERESSDRRAQVGSGDRSEKIRTYNYKDNRTTDH
type: DOMAIN
name: Pep_chain_release_fac_I
description: Peptide chain release factor class I

phrase: ASFRNLERQLADPDVAADPKRLESIARERSRLEPLVLDFEELQRLESERDSARQLLKDSRGDAAMEELAQDELASLQEQHATLTERLTLALLPRDPRDERSVMLEIRAGAGGDEACLWAGDLARMYERYSQKVGWAVQSISCTEADLGGFRELILSVRGDSVYSQLKFEAGVHRVQRVPATESQGRVHTSTAT
type: DOMAIN
name: PCRF
description: Peptide chain release factor
Protein sequence:
MAKLTKRMRVIRDKVDGMKSYDINEAVALLKELATAKFVESVDVAVNLGIDPRKSDQNVRGATVLPHGTGRDVRVAVFTQGANAEAAKAAGAELVGMEELAEQIKAGEMNFDVVIASPDAMRVVGMLGQILGPRGLMPNPKTGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDFTTEQLKENLEALVSALKKAKPAVAKGVFVKKISISTTMGAGVAVDQATLETAN

Annotated regions:
phrase: MRVVGMLGQILGPRGLMP
type: CONSERVED_SITE
name: Ribosomal_uL1_CS
description: Large ribosomal subunit protein uL1, conserved site
Protein sequence:
MWLKLFFLLLYFLVLFVLARFFEAIVWYETGIFATQLVDPVALSFKKLKTILECRGLGYSGLPEKKDVRELVEKSGDLMEGELYSALKEEEASESVSSTNFSGEMHFYELVEDTKDGIWLVQVIANDRSPLVGKIHWEKMVKKVSRFGIRTGTFNCSSDPRYCRRRGWVRSTLIMSVPQTSTSKGKVMLKEYSGRKIEVEHIFKWITAHAASRIKTIYNVEHLKEEWNKSDQYWVKIYLFANLDQPPAFFSALSIKFTGRVEFIFVNVENWNNKSYMTDIGIYNMPSYILRTPEGIYRYGNHTGEFISLQAMDSFLRSLQPEVNDLFVLSLVLVNLMAWMDLFITQGATIKRFVVLISTLGTYNSLLIISWLPVLGFLQLPYLDSFYDYSLRLLRYSNTTTLASWVRADWMFYTSHPALFLSTYLGHGLLIDYFEKKRRRSNNDEVNANNLEWLSSLWDWYTSYLFHPIASFQNFPVDSDWDEDPDLFLERLAFPDLWLHPLIPTDYIKNLPMWRFKCLGVQSEEEMSESSQDTENDSDSDNMDTFSSSKDIFEDKQSVVHSSPGRTSHCDTEACSCANKCESSPCERKRRSYGSHNTDEDMEPDWLTWPAGTLHCTECVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCRWPSYKKKQPYAQQQPLSNDVPS

Annotated regions:
phrase: CVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPV
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: ECVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVC
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: CVVCLENFENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVC
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type
Protein sequence:
MFLLPLPAAARVAVRQLSVRRFWGPGPDAANMTKGLVLGIYSKEKEDDAPQFTSAGENFDKLVSGKLREILNISGPPLKAGKTRTFYGLHEDFSSVVVVGLGKKGAGVDDQENWHEGKENIRAAVAAGCRQIQDLEIPSVEVDPCGDAQAAAEGAVLGLYEYDELKQKKKVVVSAKLHGSGDQEAWQRGVLFASGQNLARHLMETPANEMTPTRFAEVIEKNLKSASSKTDVHIRPKSWIEEQEMGSFLSVAKGSEEPPVFLEIHYKGSPDASDPPLVFVGKGITFDSGGISIKASANMDLMRADMGGAATICSTIVSAAKLDLPINLVGLAPLCENMPSGKANKPGDVVRAKNGKTIQVDNTDAEGRLILADALCYAHTFNPKVIINAATLTGAMDIALGSGATGVFTNSSWLWNKLFEASIETGDRVWRMPLFEHYTKQIVDCQLADVNNIGKYRSAGACTAAAFLKEFVTHPKWAHLDIAGVMTNKDEVPYLRKGMAGRPTRTLIEFLLRFSQDSA

Annotated regions:
phrase: NLARHLMETPANEMTPTRFAEVIEKNLKSASSKTDVHIRPKSWIEEQEMGSFLSVAKGSEEPPVFLEIHYKGSPDASDPPLVFVGKGITFDSGGISIKASANMDLMRADMGGAATICSTIVSAAKLDLPINLVGLAPLCENMPSGKANKPGDVVRAKNGKTIQVDNTDAEGRLILADALCYAHTFNPKVIINAATLTGAMDIALGSGATGVFTNSSWLWNKLFEASIETGDRVWRMPLFEHYTKQIVDCQLADVNNIGKYRSAGACTAAAFLKEFVTHPKWAHLDIAGVMTNKDEVPYLRKGMAGRPTRTL
type: DOMAIN
name: Peptidase_M17_C
description: Peptidase M17, leucyl aminopeptidase, C-terminal

phrase: VLGIYSKEKEDDAPQFTSAGENFDKLVSGKLREILNISGPPLKAGKTRTFYGLHEDFSSVVVVGLGKKGAGVDDQENWHEGKENIRAAVAAGCRQIQDLEIPSVEVDPCGDAQAAAEGAVLGLYEYDELKQK
type: DOMAIN
name: Peptidase_M17_N
description: Peptidase M17, leucyl aminopeptidase, N-terminal

phrase: NTDAEGR
type: DOMAIN
name: Peptidase_M17_C
description: Peptidase M17, leucyl aminopeptidase, C-terminal
Protein sequence:
MGLWDVDKIEYVGRAKGPKEDFAFHYYDADKVVAGKKMKDWLRFGVAWWHTFNQELVDPFGTGTAHRPYYKYTDPMDQALAKVDYAFELFQKLGVEYFCFHDRDIAPEGDTLRETNANLDKVVDKIEENMKSTGVKLLWNTSSLFTNPRFVSGAATSPFADIYAYAGGQLKKSLEIGKRLGAENYVFWGGREGYENLWNTEMKRETDHIAKFFHMCADYAKEIGFEAQFLIEPKPKEPTLHQYDFDAATAIEFLRNHDLTDVFKLNLEGNHANLAGHTYQHEIRVARESGFLGSLDANQGDKLIGWDMDEFPTDLYETVAVMWEVLQAGSIGPHGGLNFDAKPRRTSFYEEDLFRSHIAGMDTYAAGLLVADKMNQDGFIQDLMAERYSSYDSGIGKDIDEGNVTLADLEAYSLDKPQSELIAATKSDHLESVKATINNYIIDALSEVE

Annotated regions:
phrase: QKLGVEYFCFHDRDIAPEGDTLRETNANLDKVVDKIEENMKSTGVKLLWNTSSLFTNPRFVSGAATSPFADIYAYAGGQLKKSLEIGKRLGAENYVFWGGREGYENLWNTEMKRETDHIAKFFHMCADYAKEIGFEAQFLIEPKPKEPTLHQYDFDAATAIEFLRNHDLTDVFKLNLEGNHANLAGHTYQHEIRV
type: DOMAIN
name: Xyl_isomerase-like_TIM-brl
description: Xylose isomerase-like, TIM barrel domain
Protein sequence:
MNKDTTIIHLDTIEEAIADIRAGKIVLVVDDEDRENEGDMICAAETITPELVNFMIKEARGLMCAPLTIERCDELGLDMMVGNNTSVHTTPFTVSVDLLGHGCTTGISASDRSKTIRALVDPDTNPDELGRPGHIFPLRAVEGGVIRRAGHTEAAVDLARLAGLKPAGVLIEVLNEDGTMARLPELRVMADRFGMKLISIQDLIAYRLRTESLIRREIGVDMPTEWGHFDLIAFKQSNTDDTHLALVKGTWEPGEPVLVRVHSSCVTGDIFGSCRCDCGGQLHAAMEMVEREGKGVVLYMFQEGRGIGLINKLKAYKLQEMGRDTVEANLDLGLPMDARDYGVGAQILRDLNVHKLRLISNNPKKRAGLMGYGLEIVDTVPIEMPSNPHNERYLATKRDKMGHLLNKV

Annotated regions:
phrase: GVDMPTEWGHFDLIAFKQSNTDDTHLALVKGTWEPGEPVLVRVHSSCVTGDIFGSCRCDCGGQLHAAMEMVEREGKGVVLYMFQEGRGIGLINKLKAYKLQEMGRDTVEANLDLGLPMDARDYGVGAQILRDLNVHKLRLISNNPKKRAGLMGYGLEIVDTV
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MSVNNERQVPDSPVKAALAPPRPARIEPVPVATLAARAAARVIGQDDTAVTGATLRAQHVLPGDLFAALPGARAHGADFAAEALSAGAAAVLTDEEGAERPALRDADVPVLVHNDPRAVLGAVAAWIYGEPSLELSVLGITGTSGKTTTSYLVDSGLRAAGFTTGLIGTVETRIAGERLASAFTTPEAPDLQALFAVMLEHGVTHVPMEVSSHALALGRVNGTRFGVGAFTNLSQDHLDFHRDMEEYFAAKSLLFDGRSTTEVVVVDTAWGQALVKPHTITVSTQPGVEAAWTATDIESTPAGEQSFTLRGPEGRTARATIPLPGTFNVANALLAAAILDTTGISLLDIVNGFASVEVPGRMERVYLGQKFTAVVDYAHKPAAVAEALDALRARTGNRIITVLGCGGDRDTGKRPMMGEAAARRSEVLIVTDDNPRSEDPALIRAAMLTGARAARAGGKVLEIGDRRAAITKAIELAEPGDVVLIAGKGHETGQEAGGIVHPFSDRDELAAAIRHRLEGQPGVSA

Annotated regions:
phrase: ITGTSGKTTTSYLVDSGLRAAGFTTGLIGTVETRIAGERLASAFTTPEAPDLQALFAVMLEHGVTHVPMEVSSHALALGRVNGTRFGVGAFTNLSQDHLDFHRDMEEYFAAKSLLFDGRSTTEVVVVDTAWGQALVKPHTITVSTQPGVEAAWTATDIESTPAGEQSFTLRGPEGRTARATIPLPGTFNVANALLAAA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRMERVYLGQKFTAVVDYAHKPAAVAEALDALRARTGNRIITVLGCGGDRDTGKRPMMGEAAARRSEVLIVTDDNPRSEDPALIRAAMLTGARAARAGGKVLEIGDRRAAITKAIELAEPGDVVLIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: TGATLRAQHVLPGDLFAALPGARAHGADFAAEALSAGAAAVLTDEEGAERPALRDADVPVLVHNDPRAVLGAVA
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain
Protein sequence:
MSQLTDGFGRSFPYLRLSLTEACNFRCSYCLPDGYQADGRPRFLQVDEIARLVRAFAALGMSKIRLTGGEPSLRKDLDEIIATVAAVPGIRKVAITTNGTLLPRRLPGWHRAGLTALNVSMDSLQRERFKTITGHDRLPEIEQGLALAQALGLPAIKLNAVLLRGLNDDELPQWMDYLRGRPFSVRFIELMRTGDNEAYFQRHHLRADVVIEQLLAAGWHERPRAADAGPAREFGHPDHRGSIGIIAPYSRDFCKGCNRLRVTAKGDLRLCLFGEFGVPLRPLLQRDEDHDALLARITTQLGLKAAGHGLHQGQTGLTPHLASIGG

Annotated regions:
phrase: LTEACNFRCSY
type: CONSERVED_SITE
name: MoaA_NifB_PqqE_Fe-S-bd_CS
description: MoaA/NifB/PqqE, iron-sulphur binding, conserved site

phrase: GFGRSFPYLRLSLTEACNFRCSYCLPDGYQADGRPRFLQVDEIARLVRAFAALGMSKIRLTGGEPSLRKDLDEIIATVAAVPGIRKVAITTNGTLLPRRLPGWHRAGLTALNVSMDSLQRERFKTITGHDRLPEIEQGLALAQALGLPAIKLNAVLLRGLNDDELPQWMDYLRGRPFSVRFIELMRTGDNEAYFQRHHLRADVVIEQLLAAGWHERPRAADAGPA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: YSRDFCKGCNRLRVTAKGDLRLCLFGEFGVPLRPLLQRDEDHDALLARITTQLGLKAAGHGLHQGQTGL
type: DOMAIN
name: MoaA_twitch
description: Molybdenum cofactor biosynthesis protein A-like, twitch domain

phrase: SVRFIELMRTGDNEAYFQRHHLRADVVIEQLLAAGWHERPRAADAGPAREFGHPDHRGSIGIIAPYSRDFCKGCNRLRVTAKGDLRLCLFGEFGVPLRPLLQRDEDHDALLARITTQLGLKAAG
type: DOMAIN
name: MoaA_twitch
description: Molybdenum cofactor biosynthesis protein A-like, twitch domain

phrase: PYLRLSLTEACNFRCSYCLPDGYQADGRPRFLQVDEIARLVRAFAALGMSKIRLTGGEPSLRKDLDEIIATVAAVPGIRKVAITTNGTLLPRRLPGWHRAGLTALNVSMDSLQRERFKTITGHDRLPEIEQGLALAQALGLPAIKLNAVLLRGLNDDELPQWMDYLRGRPFSVRFIELMRTGDNEAYFQRHHLRADVVIEQLL
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: SLTEACNFRCSYCLPDGYQADGRPRFLQVDEIARLVRAFAALGMSKIRLTGGEPSLRKDLDEIIATVAAVPGIRKVAITTNGTLLPRRLPGWHRAGLTALNVSMDSLQRERFKTITGHDRLPEIEQGLALAQALGLPAIKLNAVLLRGLNDDELPQWMDY
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MYGITSTANSTGNQSYANRLFIYEVVGLGGDGRNENSLVRKSGTTFITVPYARMNQEMQRITKLGGKIVSIRPAEDAAQIVSEGQSSAQASAQSPMASSTKIVHPKTTDTSVPVNIYRPKTPFLGKCIENYELVDEGGSGTVRHVTFDISEGDLRYLEGQSIGIIPPGEDKNGKPHKLRLYSIASTRHGDMEDNKTVSLCVRQLEYQDPESGETVYGVCSTYLCNLPVGTDDVKITGPVGKEMLLPDDEDATVVMLATGTGIAPFRAFLWRMFKEQHEDYKFKGKAWLIFGVPYTANILYKDDFEKMAAENPDNFRLTYAISREQKTADGGKVYVQSRVSEYADELFEMIQKPNTHVYMCGLKGMQPPIDETFTAEAEKRGLNWEEMRRSMKKEHRWHVEVY

Annotated regions:
phrase: NRLFIYEVVGLGGDGRNENSLVRKSGTTFITVPYARMNQEMQRITKLGGKIVSIRP
type: DOMAIN
name: CpcD-like_dom
description: CpcD-like domain

phrase: YLEGQSIGII
type: DOMAIN
name: Flavoprot_Pyr_Nucl_cyt_Rdtase
description: Flavoprotein pyridine nucleotide cytochrome reductase

phrase: RLYSIAS
type: DOMAIN
name: Flavoprot_Pyr_Nucl_cyt_Rdtase
description: Flavoprotein pyridine nucleotide cytochrome reductase

phrase: GVCSTYLCN
type: DOMAIN
name: Flavoprot_Pyr_Nucl_cyt_Rdtase
description: Flavoprotein pyridine nucleotide cytochrome reductase

phrase: VMLATGTGIAPFRAFLWRM
type: DOMAIN
name: Flavoprot_Pyr_Nucl_cyt_Rdtase
description: Flavoprotein pyridine nucleotide cytochrome reductase

phrase: GKAWLIFGV
type: DOMAIN
name: Flavoprot_Pyr_Nucl_cyt_Rdtase
description: Flavoprotein pyridine nucleotide cytochrome reductase

phrase: ANILYKDDFEK
type: DOMAIN
name: Flavoprot_Pyr_Nucl_cyt_Rdtase
description: Flavoprotein pyridine nucleotide cytochrome reductase

phrase: KVYVQSRVSEYADELF
type: DOMAIN
name: Flavoprot_Pyr_Nucl_cyt_Rdtase
description: Flavoprotein pyridine nucleotide cytochrome reductase

phrase: HVYMCGLK
type: DOMAIN
name: Flavoprot_Pyr_Nucl_cyt_Rdtase
description: Flavoprotein pyridine nucleotide cytochrome reductase

phrase: NRLFIYEVVGLGGDGRNENSLVRKSGTTFITVPYARMNQEMQRITKLGGKIVSIR
type: DOMAIN
name: CpcD-like_dom
description: CpcD-like domain

phrase: NRLFIYEVVGLGGDGRNENSLVRKSGTTFITVPYARMNQEMQRITKLGGKIVSIRP
type: DOMAIN
name: CpcD-like_dom
description: CpcD-like domain

phrase: MLATGTGIAPFRAFLWRMFKEQHEDYKFKGKAWLIFGVPYTANILYKDDFEKMAAENPDNFRLTYAISREQKTADGGKVYVQSRVSEYADELFEMIQKPNTHVYMCGLKGM
type: DOMAIN
name: OxRdtase_FAD/NAD-bd
description: Oxidoreductase FAD/NAD(P)-binding

phrase: KTPFLGKCIENYELVDEGGSGTVRHVTFDISEGDLRYLEGQSIGIIPPGEDKNGKPHKLRLYSIASTRHGDMEDNKTVSLCVRQLEYQDPESGETVYGVCSTYLCNLPVGTDDVKITGPVGKEML
type: DOMAIN
name: FAD-bd_FR_type
description: FAD-binding domain, ferredoxin reductase-type