nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MHRYFERVNRISYEGRQSNNPLAFRHYNPEEIILGKKMKDHLRFAVCYWHNFCWDGTDMFGSGAFERFWQKGGDALELAKLKADVAFEFFYKLNIPFYCFHDIDVAPEGCSLKEYIYNLGVMSDILADKQAETGVKLLWGTANCFTHPRYAAGASTNPDLNIFAYASAQVCQVMQMTKKLGGENYVLWGGREGYESLLNTDLRQEREQIGRFMQMVVDYKYKIGFQGTLLIEPKPQEPTKHQYDYDVATVYGFLKQFGLENEIKVNIEANHATLAGHSFQHEVATAIALGILGSIDANRGDAQLGWDTDQFPNSVEENSLVMYEILKAGGFTTGGLNFDAKVRRQSIDIDDLFYGHIGAIDTMALSLKSAVKILVDGKLDEYVAQRYSGWNSELGRDILEGKMTLDEVAHYAETLVQEPKHRSGQQELLENLINRYIYD

Annotated regions:
Protein sequence:
MDYIKEWILPQDPEVAEAIAQEEQRQRYKIELIASENFVSRAVMAAQGSVLTNKYAEGYPGKRYYGGCEYVDIVEDLARERVKKLFGAEHANVQPHSGAQANTAVYFAMLKPGDTVLGMNLSHGGHLTHGSPVNISGMYYNFVAYGVDQVTERIDYDVVRQLALEHRPKLIVAGASAYPRQIDFARLREIADEADSYFMVDMAHIAGLVAAGLHQNPVPYAHFVTTTTHKTLRGPRGGLILCQEEFAKAIDKAIFPGIQGGPLMHVIAAKAVAFGEALKPEFVEYQKRIVENAKVLSETLAEKGFRIVSGGTDNHLMLVDVRSKGLTGKEAEYILDEVGITVNKNTIPYDPASPMVTSGIRIGTPAVTSRGMDTLAMKKIAAAIDIALSEPNEAGAAKARDMVAALCAEYPLYPNLD

Annotated regions:
phrase: QDPEVAEAIAQEEQRQRYKIELIASENFVSRAVMAAQGSVLTNKYAEGYPGKRYYGGCEYVDIVEDLARERVKKLFGAEHANVQPHSGAQANTAVYFAMLKPGDTVLGMNLSHGGHLTHGSPVNISGMYYNFVAYGVDQVTERIDYDVVRQLALEHRPKLIVAGASAYPRQIDFARLREIADEADSYFMVDMAHIAGLVAAGLHQNPVPYAHFVTTTTHKTLRGPRGGLILCQEEFAKAIDKAIFPGIQGGPLMHVIAAKAVAFGEALKPEFVEYQKRIVENAKVLSETLAEKGFRIVSGGTDNHLMLVDVRSKGLTGKEAEYILDEVGITVNKNTIPYDPASPMVTSGIRIGTPAVTSRGMDTLAMKKIAA
type: DOMAIN
name: SHMT-like_dom
description: Serine hydroxymethyltransferase-like domain

phrase: HFVTTTTHKTLRGPRG
type: BINDING_SITE
name: Ser_HO-MeTrfase_PLP_BS
description: Serine hydroxymethyltransferase, pyridoxal phosphate binding site
Protein sequence:
MPKMKTHRGSAKRFRRTGTGKLRRFKAYASHLTGKKSAKRIRNLRKGTTVSEADMKRIDKMIP

Annotated regions:
phrase: KTHRGSAKRFRRTGTGKLRRFKAYAS
type: CONSERVED_SITE
name: Ribosomal_bL35_CS
description: Large ribosomal subunit protein bL35, conserved site
Protein sequence:
MHNLKYLLAPWVVVLLEKKVLGIKEDSRQIKPGDLFVAIPGYHTDGRFFIDKAIAKGASAVLAETEKKNLDGSIYYRDNVPVIYLQKLSHIICEIASRFYDYPAKKLELVGITGTNGKTTISHLIAQLVNLLGGRGAVMGTLGNGLYNELLPTKNTTSSAIEIQNIFNFLLKKGANVVAMEVSSHGILEHRVSGMSFTAAVFTNLSRDHLDYHGNIKQYELAKWQLFAKNNINQVIFNIDDKVGLKWSQYIPDAITVSIENNIKHEHMNRWLTATKISHHDLGSYIKFNSSWGSGEFSIKLIGLFNVINVLLAFTTLLSLNYPIKQLINCVSYLKSIPGRMEVFKAVNKPTVIVDYAHTPDALSKALTAVRLHYCKGNIWCLFGCGGDRDKGKRPLMGRIAEKLSDRVVISDDNPRTELSQNIIDDILTGLVLPHKALIIPNRFQAIKHMIRNAKNEDILLIAGKGHENYQIFGKHRITYSDRLTVAHLLEIPI

Annotated regions:
phrase: GRMEVFKAVNKPTVIVDYAHTPDALSKALTAVRLHYCKGNIWCLFGCGGDRDKGKRPLMGRIAEKLSDRVVISDDNPRTELSQNIIDDILTGLVLPHKALIIPNRFQAIKHMIRNAKNEDILLIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: GIKEDSRQIKPGDLFVAIPGYHTDGRFFIDKAIAKGASAVLAETEKKNLDGSIYYRDNVPVIYLQKLSHIICEIASRF
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: ITGTNGKTTISHLIAQLVNLLGGRGAVMGTLGNGLYNELLPTKNTTSSAIEIQNIFNFLLKKGANVVAMEVSSHGILEHRVSGMSFTAAVFTNLSRDHLDYHGNIKQYELAKWQLFAKNNINQVIFNIDDKVGLKWSQYIPDAITVSIENNIKHEHMNRWLTATKISHHDLGSYIKFNSSWGSGEFSIKLIGLFNVINVLLAF
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central
Protein sequence:
MVTILDRTKPDDKRIRHPEKAHKPDTEVLRKPEWIRVKAPTSKGYQETRELVRSHKLVTVCEEAGCPNIGECWEKKHATFMIMGEICTRACAFCNVATGKPNALDREEPANVAKAVRQMGLSHVVITSVDRDDLADGGAEHFEQVIWAIREASPATTIEILTPDFLKKPGALERVVAAKPDVFNHNMETVPGNYLTVRPGARYFHSVRLLQRVKELDPTMFTKSGIMVGLGEERNEVLQLMDDLRTADVDFLTIGQYLQPTRKHHKVERFVTPEEFKSYEDIAYTKGFLMVASSPLTRSSHHAGDDFARLKANREKKLLAAAE

Annotated regions:
phrase: WEKKHATFMIMGEICTRACAFCNVATGKPNALDREEPANVAKAVRQMGLSHVVITSVDRDDLADGGAEHFEQVIWAIREASPATTIEILTPDFLKKPGALERVVAAKPDVFNHNMETVPGNYLTVRPGARYFHSVRLLQRVKELDPTMFTKSGIMVGLGEERNEVLQLMDDLRTADVDFLTIGQYLQPTRKHHKVERFVTPEEFKSYEDIAYTKGF
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: HATFMIMGEICTRACAFCNVATGKPNALDREEPANVAKAVRQMGLSHVVITSVDRDDLADGGAEHFEQVIWAIREASPATTIEILTPDFLKKPGALERVVAAKPDVFNHNMETVPGNYLTVRPGARYFHSVRLLQRVKELDPTMFTKSGIMVGLGEERNEVLQLMDDLRTADVDFLTIGQYLQPTRKHHKVERFVTPEEFKSYEDIAY
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: MIMGEICTRACAFCNVATGKPNALDREEPANVAKAVRQMGLSHVVITSVDRDDLADGGAEHFEQVIWAIREASPATTIEILTPDFLKKPGALERVVAAKPDVFNHNMETVPGNYLTVRPGARYFHSVRLLQRVKELDPTMFTKSGIMVGLGEERNEVLQLMDD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: HPEKAHKPDTEVLRKPEWIRVKAPTSKGYQETRELVRSHKLVTVCEEAG
type: DOMAIN
name: LIAS_N
description: Lipoyl synthase, N-terminal

phrase: EKAHKPDTEVLRKPEWIRVKAPTSKGYQETRELVRSHKLVTVCEEAGCPNIGECWEKKHATFMIMGEICTRACAFCNVATGKPNALDREEPANVAKAVRQMGLSHVVITSVDRDDLADGGAEHFEQVIWAIREASPATTIEILTPDFLKKPGALERVVAAKPDVFNHNMETVPGNYLTVRPGARYFHSVRLLQRVKELDPTMFTKSGIMVGLGEERNEVLQLMDDLRTADVDFLTIGQYLQPTRKHHKVERFVTPEEFKSYEDIAYTKGFLMVASSPLTRSSHHAGDDFA
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MSRFLICSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKVADRSGRKPVAIPGAALFIIASVFCSLAETSTLFLAGRFLQGLGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFWTMATMGIAVLMLSLFILKETRPAAPTNSDKPRENSESLLNRFFLSRVVITTLSVSVILTFVNTSPVLLMEIMGFERGEYATIMALTAGVSMTVSFSTPFALGIFKPRTLMITSQVLFLAAGITLAVSPSHAVSLFGITLICAGFSVGFGVAMSQALGPFSLRAGVASSTLGIAQVCGSSLWIWLAAVVGIGAWNMLIGILIACSIVSLLLIMFVAPGRPVAAHEEIHHHA

Annotated regions:
phrase: MSRFLICSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKVADRSGRKPVAIPGAALFIIASVFCSLAETSTLFLAGRFLQGLGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFWTMATMGIAVLMLSLFILKETRPAAPTNSDKPRENSESLLNRFFLSRVVITTLSVSVILTFVNTSPVLLMEIMGFERGEYATIMALTAGVSMTVSFSTPFALGIFKPRTLMITSQVLFLAAGITLAVSPSHAVSLFGITLICAGFSVGFGVAMSQALGPFSLRAGVASSTLGIAQVCGSSLWIWLAAVVGIGAWNMLIGILIACSIVSLLLIMFVAPGR
type: DOMAIN
name: MFS_dom
description: Major facilitator superfamily domain
Protein sequence:
MSVTMREMLEAGCHFGHQTRFWNPKMAPFIFGHRNKIHIINLEKTLPMFQDALKYVRQLAANRGTVLFVGTKRQSREILAEEAGRAGMPYVDARWLGGMLTNFKTVKISIKRLKDMEAAKEAGALETMSKKEALMFEREMEKLEKSIGGIKDMGGIPDAIFVVDVGYHKIAVTEANKLGIPVIGVVDTNHSPEGIDYVIPGNDDSSKAVALYVRGVADAILEGRANAVQEVVEAARGDDEFVEVQEG

Annotated regions:
Protein sequence:
MIVKTRAIVLREIRYRDQSKICSLFTREFGLLSVIIKGGRNPKSKLAGRFIAGTVLDIVLYKKTTREIQLVSEGNLLFSPMVPQPDIERYAIMYRIIDLVSQSIDGQEKNIPLFSLIASVLEELYSTSDRFRLLYSWFLLKLVSLLGFEPSIHRCVLSHEEISPATLAENKGELCFLFNPGGVALPASKSVIENENRPLSMATYALLSAISSTPLNLLKNIEAIPPQTDLLCNLLEEYCTLHLVHHPHKKNIAIVSQILSE

Annotated regions:
phrase: MIVKTRAIVLREIRYRDQSKICSLFTREFGLLSVIIKGGRNPKSKLAGRFIAGTVLDIVLYKKTTREIQLVSEGNL
type: DOMAIN
name: DNA_rep/recomb_RecO_N
description: DNA replication/recombination mediator RecO, N-terminal
Protein sequence:
MRLVVIAVGRLKQGPERELADRYRGRFADIGRNLGFRGLDVHEVAESRARDAGQRIREEAAAVLALAPKEMILVALDEKGKSIDSAAFAEHLGRWRDESVADAVFMIGGADGLSPELRRRARLSVAFGAATWPHQMVRVMLLEQIYRAATILAGHPYHRG

Annotated regions:
Protein sequence:
MNASRKIVVASRNPGKVRELAQVLAGLGVLLVGLDEIDPEERIAQAPEDAASFADNARSKAVHYARALGLWALADDSGLEVDALGGAPGVRSARYAADECPAHADRAQRDAANNRKLLRALAGIARDRRTARFVCHLAVSDGRDILVEATGTLEGLIATEPAGQNGFGYDPLFFLPAMGCTAAQLPPERKNAISHRGQAARKLAERLKALLHGAGQREGPASWPR

Annotated regions:
Protein sequence:
MSGTLALTETLIGRASVTPDDQNCQHLLVERLSAIGFECETIESNGVTNLWAVKRGAAGKEGKLLAFAGHTDVVPTGPAEQWSSAPFEPTHRDGKLYGRGAADMKASIAGFVVASEEFVAAHPQHRGSLALLITSDEEGPATDGTVKVVDALEARGERMDYCVVGEPTSSVRFGDMVKNGRRGSMSGKLTVKGVQGHIAYPHLAKNPVHLLAPALAELVAEHWDEGNEYFPPTTWQVSNLHSGTGATNIIPGHAEVMFNFRFSTASTVEGLQSRVHQILDKQGLDYDLTWTVSGLPFLTPRGELSNALEKAIYDETGIATELSTTGGTSDGRFIARICKQVIEFGPLNASIHKIDEHIEVAHIEPLKNVYRRVLEQLIA

Annotated regions:
phrase: NGRRGSMSGKLTVKGVQGHIAYPHLAKNPVHLLAPALAELVAEHWDEGNEYFPPTTWQVSNLHSGTGATNIIPGHAEVMFNFRFSTASTVEGLQSRVHQILDKQGLD
type: DOMAIN
name: Peptidase_M20_dimer
description: Peptidase M20, dimerisation domain

phrase: AADMKASIAGFVVASEEFVAAHPQHRGSLALLITSDEE
type: CONSERVED_SITE
name: ArgE/DapE_CS
description: ArgE/DapE/ACY1/CPG2/YscS, conserved site

phrase: LAFAGHTDV
type: CONSERVED_SITE
name: ArgE/DapE_CS
description: ArgE/DapE/ACY1/CPG2/YscS, conserved site
Protein sequence:
MHDIRAIRENPAAFDAALSRRGSAPVSSDILALDEARRGKILAAETAQADQNKASKEVGAAKARGDEAEFERLRALVAEKKAEIAAMQAEAKELDTQLSELLAGLPNLPAEDVPQGADEADNVELHRWGTPREMDFAPKEHFDLASVQDGMDFETAAKLSGARFVLLSGAVARIHRALAQFMLDTHSEQNGLTEVNGPVLVLSEMMYGTGQLPKFGEDSYQTREGWWLIPTSEVSLTNIVNGSTIAEDYLPRRYTAHSLCFRSEAGSAGKDTRGMLRQHQFEKVEMVSVTHPDHSDAEQKRMLRCAEGILEALGIPYRTIVLCTGDMGFGARRTYDIEAWLPGQNTYREISSVSTCGDFQARRMNARFKPADGGKPQFVHTLNGSGLAVGRCLIAVLENGQNADGSVTLPQALAPYLGGKLTLNTDGTLN

Annotated regions:
phrase: DNVELHRWGTPREMDFAPKEHFDLASVQDGMDFETAAKLSGARFVLLSGAVARIHRALAQFMLDTHSEQNGLTEVNGPVLVLSEMMYGTGQLPKFGEDSYQTREGWWLIPTSEVSLTNIVNGSTIAEDYLPRRYTAHSLCFRSEAGSAGKDTRGMLRQHQFEKVEMVSVTHPDHSDAEQKRMLRCAEGILEALGIPYRTIVLCTGDMGFGARRTYDIEAWLPGQNTYREISSVSTCGDFQARRMNARFKPADGGKPQFVHTLNGSGLAVGRCLIAVLENGQNADGSVTLPQALAPY
type: DOMAIN
name: SerRS_core
description: Serine-tRNA ligase catalytic core domain

phrase: RIHRALAQFMLDTHSEQNGLTEVNGPVLVLSEMMYGTGQLPKFGEDSYQTREGWWLIPTSEVSLTNIVNGSTIAEDYLPRRYTAHSLCFRSEAGSAGKDTRGMLRQHQFEKVEMVSVTHPDHSDAEQKRMLRCAEGILEALGIPYRTIVLCTGDMGFGARRTYDIEAWLPGQNTYREISSVSTCGDFQARRMNARFKPADGGKPQFVHTLNGSGLAVGRCLIAVLENGQNADGSVTL
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: MHDIRAIRENPAAFDAALSRRGSAPVSSDILALDEARRGKILAAETAQADQNKASKEVGAAKARGDEAEFERLRALVAEKKAEIAAMQAEAKELDTQLSELLAGLPNL
type: DOMAIN
name: Ser-tRNA-synth_1_N
description: Serine-tRNA synthetase, type1, N-terminal

phrase: EGWWLIPTSEVSLTNIVNGSTIAEDYLPRRYTAHSLCFRSEAGSAGKDTRGMLRQHQFEKVEMVSVTHPDHSDAEQKRMLRCAEGILEALGIPYRTIVLCTGDMGFGARRTYDIEAWLPGQNTYREISSVSTCGDFQARRMNARFKPADGGKPQFVHTLNGSGLAVGRCLIAVLE
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
Protein sequence:
MDFIRRKYLIYTVENNIDFLKDDTLSKVNNFTLNHVLALKYLVSNFPQHVITKDVLANTNFFVFIHMVRCCKVYEAVLRHAFDAPTLYVKALTKNYLSFSNAIQSYKETVHKLTQDEKFLEVAEYMEELGELIGVNYDLVLNPLFHGGEPIKDMEIIFLKLFKKTDFKVVKKLSVIRLLIWAYLSKKDTGIEFADNDRQDIYTLFQHTGRIVHSNLTETFRDYIFPGDKTSYWVWLNESIANDADIVLNRPAITMYDKILSYIYSEIKQGRVNKNMLKLVYIFEPEKDIRELLLEIIYDIPGDILSIIDAKNDDWKKYFISFYKANFINGNTFISDRTFNEDLFRVVVQIDPEYFDNERIMSLFSTSAVEIKRFDELDINNSYISNIIYEVNDITLDTMDDMKKCQIFNEDTSYYVKEYNTYLFLNETDPMVIENGILKKLSSIKSKSRRLNLFSKNILKYYLDGQLARLGLVLDDYKGDLLVKMINHLKFVEDVSAFVRFSTDKNPSVLPSLINTILASYNISIIVLFQKFLRDNLYHVEKFLDKSIHLTKTDKKYILQLIRHGRS

Annotated regions:
Protein sequence:
MPSIVRNHGPHNKILLSALLLALFGWVPLASAAVAVPMDSTGPYRTVSHPENAPSGVDAGVGPSEWTHAYANPAHNAAFPVPDDAPEWIRNGVSWLFPEARAWPLANPPFGSKTYGAAEASVTQTQFYGNALGPSVVDGVVYAESDDMFAYAVNAKTGKLIWRASPVGNNLMGNPLVIGNTVYLSAGSVAFNFANVLRYAHNPSASARGLNVSFNGIYALNRSNGKLLWYFATPGETMATPAYDNNTLFIADGAGNAFGINATTGKQVWKTHVGGMDNMSSVTAYRHNIYFAMAIKPYLYCLNESNGHIVWKGTIPGASNTGIGDVSPAAADGVVVLDATTKPQANKKAMFSNVIRAFDAKTGAVLWTRNMGSGGKIPAFKGGVPMIHNNIVYVGNPVASTYQAYELKTGKLLWTWHVPTKVAAGAGRSAPTYYKGLLYITTGQYIFVVNPATGKELHQHHIGGQFGIESPVIVGGTVYLTNSWDWIMAIPLKTISHGS

Annotated regions:
phrase: GVVYAESDDMFAYAVNAKTGKLIWRASPVG
type: REPEAT
name: PQQ_repeat
description: Pyrrolo-quinoline quinone repeat

phrase: APTYYKGLLYITTGQYIFVVNPATGKELHQH
type: REPEAT
name: PQQ_b-propeller_rpt
description: Pyrrolo-quinoline quinone beta-propeller repeat

phrase: PSVVDGVVYAESDDMFAYAVNAKTGKLIWRA
type: REPEAT
name: PQQ_b-propeller_rpt
description: Pyrrolo-quinoline quinone beta-propeller repeat

phrase: PAAADGVVVLDATTKPQANKKAMFSNVIRAFDAKTGAVLWTR
type: REPEAT
name: PQQ_b-propeller_rpt
description: Pyrrolo-quinoline quinone beta-propeller repeat

phrase: PMIHNNIVYVGNPVASTYQAYELKTGKLLWTW
type: REPEAT
name: PQQ_b-propeller_rpt
description: Pyrrolo-quinoline quinone beta-propeller repeat

phrase: TPAYDNNTLFIADGAGNAFGINATTGKQVWKT
type: REPEAT
name: PQQ_b-propeller_rpt
description: Pyrrolo-quinoline quinone beta-propeller repeat

phrase: PLVIGNTVYLSAGSVAFNFANVLRYAHNPSASARGLNVSFNGIYALNRSNGKLLWYF
type: REPEAT
name: PQQ_b-propeller_rpt
description: Pyrrolo-quinoline quinone beta-propeller repeat

phrase: NGIYALNRSNGKLLWYFATPGETMATPAYDNNTLFIADGAGNAFGINATTGKQVWKT
type: REPEAT
name: PQQ_repeat
description: Pyrrolo-quinoline quinone repeat

phrase: AYRHNIYFAMAIKPYLYCLNESNGHIVWKGTIPGASNTGIGDVSPAAADGVVVLDATTKPQANKKAMFSNVIRAFDAKTGAVLWTRNMGSGGKIPAFKGGVPMIHNNIVYVGNPVASTYQAYELKTGKLLWTWHVPTKVAAGAGRSAPTYYKGLLYITTGQYIFVVNPATGKELHQHHIGGQFGIESPVIVGGTVYLTNSWDWIMAIPLK
type: REPEAT
name: PQQ_repeat
description: Pyrrolo-quinoline quinone repeat
Protein sequence:
MIFITLEHILAHISFSLILVVTLIYWGTLVYRIEGLSSSGGKGMIVTFLCTTGLLINRWLYSGHLPLSNLYESFMFLSWSSSVFHILLEVRSRDDRWLGAITAPSAMLTHGFATLGLPEEMQRSGMLVPALQSHWSMMHVSMILFSYATLLCGSLASIALLVIMSGVNRQVIFGAMDNLFSRAILPNENFYSHEKQKSDLQYTVYFSSTNYRKCQLIKQLDHWSYRAIGLGFSLSTIGTLSGAIWANEAWGSYWSWDPKETWALITWTIFAIYLHTRMNKGWQGEEPAIVASLGFFIVWIRYLGVNLLGIGLHSYGWLEP

Annotated regions:
phrase: LSNLYESFMFLSWSSSVFHILLEVRSRDDRWLGAITAPSAMLTHGFATLGLPEEMQRSGMLVPALQSHWSMMHVSMILFSYATLLCGSLASIALLVIMSGVNRQVIFGAMDNLFSRAILPNENFYSHEKQKSDLQYTVYFSSTNYRKCQLIKQLDHWSYRAIGLGFSLSTIGTLSGAIWANEAWGSYWSWDPKETWALITWTIFAIYLHTRMNKGWQGEEPAIVASLGFFIVWIRYLGVNLLGIGL
type: DOMAIN
name: Cyt_c_assembly
description: Cytochrome c assembly protein
Protein sequence:
MQNAGSLVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAALSPALVEAQRERIANASALLMQLESPLESVMAAAKIAHQNKTIVALNPAPARELPDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLGSRGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKPLPEAIRFAHAAAAIAVTRKGAQPSVPWREEIDAFLDRQR

Annotated regions:
phrase: SLVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKGANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFVNGEGENVIGIHAGANAALSPALVEAQRERIANASALLMQLESPLESVMAAAKIAHQNKTIVALNPAPARELPDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIRTVLITLGSRGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKPLPEAIRFAHAAAAIAVTRKGAQPSVP
type: DOMAIN
name: PfkB_dom
description: Carbohydrate kinase PfkB

phrase: DTIAAGDTFNGAL
type: CONSERVED_SITE
name: Carboh/pur_kinase_PfkB_CS
description: Carbohydrate/purine kinase, PfkB, conserved site
Protein sequence:
MQQLPIEKYSELLTKKQQKLTALLAPFNAPELSVFVSPVQNYRMRAEFRVWHDKGDLYHIMFNQQTKQRYRVDCFPIASLLINRMMENLIPLLKEQEILTKKLFQIDYLSTLSNKIIVSLLYHKTLTEEWQAAAQALKVRLEKLDFDVQIVGRATKQKICLERDYADEVLPVNGRNYVYRQIENSFTQPNAAVNCKMLEWAIGCTKNSSGDLLELYCGNGNFSIALAQNFRKVLATEIAKPSVAAAQFNIAENGIDNLQIIRMSAEEFTQAMNGVREFNRLKGIDLKSYECNTIFVDPPRAGLDPDTVKLVQNYDRILYISCNPNTLCNNLTELTKTHRIEKAALFDQFPYTDHMESGVWLIRK

Annotated regions:
phrase: DPPRAGLDPDTVKLVQNYDRILYISCNPN
type: ACTIVE_SITE
name: MeTrfase_TrmA_AS
description: RNA methyltransferase TrmA, active site

phrase: FDQFPYTDHM
type: CONSERVED_SITE
name: MeTrfase_TrmA_CS
description: RNA methyltransferase TrmA, conserved site
Protein sequence:
MSITIRKLDSTSAGFGAELRALLAFEASEDAAIEQSVAQILADVKSRGDAAVLEYTNRFDRLSASSIAALELPQDALQTALDSLAPKARAALEAAAARVRAYHEKQKIECGTHSWQYTESDGTVLGQKVTPLDRVGLYVPGGKAAYPSSVLMNAIPARVAGVGEIVMVVPTPDGVKNDLVLAAALLGGVDRVFTIGGAQAVGALAYGTATVPAVDKICGPGNAYVASAKRRVFGTVGIDMIAGPSEILVLCDGTTDPNWVAMDLFSQAEHDELAQSILLCPDGAFLERVEKAIDELLPSMPRQDVIRASLEGRGALIKVRDMAEACRIANDIAPEHLEISALEPQQWGQQIRHAGAIFLGRYTSESLGDYCAGPNHVLPTSRTARFSSPLGVYDFIKRSSLIEVSAEGAQTLGEIASELAYGEGLQAHAKSAEFRMKH

Annotated regions:
phrase: IDMIAGPSEILVLCDGTTDPNWVAMDLFSQAE
type: CONSERVED_SITE
name: Histidinol_DH_CS
description: Histidinol dehydrogenase, conserved site
Protein sequence:
MRYLLSAPSQIKATIQLPASKSISNRALIIHALSKGDDVLSNLSDCDDTQVMIKALTEGNEVIDILAAGTAMRFLTAYLSSTPGIHTITGTERMQQRPIQILVNALRELGAHIEYVRNEGFPPLRIEGRELTGSEITLKGNVSSQYISALLMIGPVLKNGLQLRLTGEIVSRPYINLTLQLMKDFGASASWTSDQSILVDPQPYHCLPFTVESDWSAASYWYQIAALSPQANIELTGLFRHSYQGDSRGAEVFARLGVATEYTETGIRLKKNGTCVERLDEDFVDIPDLAQTFVVTCALLNVPFRFTGLQSLKIKETDRIEALKTEMKKLGYILHDKNDSILSWDGERVEQQACPVIKTYEDHRMAMAFAPAAIHYPTIQIDEPQVVSKSYPGYWNDLRKAGFGIKVGEE

Annotated regions:
phrase: NEVIDILAAGTAMRFLTAYLSSTPGIHTITGTERMQQRPIQILVNALRELGAHIEYVRNEGFPPLRIEGRELTGSEITLKGNVSSQYISALLMIGPVLKNGLQLRLTGEIVSRPYINLTLQLMKDFGASASWTSDQSILVDPQPYHCLPFTVESDWSAASYWYQIAALSPQANIELTGLFRHSYQGDSRGAEVFARLGVATEYTETGIRLKKNGTCVERLDEDFVDIPDLAQTFVVTCALLNVPFRFTGLQSLKIKETDRIEALKTEMKKLGYILHDKNDSILSWDGERVEQQACPVIKTYEDHRMAMAFAPAAIHYPTIQIDEPQVVSKSYPGYWND
type: DOMAIN
name: Enolpyruvate_Tfrase_dom
description: Enolpyruvate transferase domain

phrase: APSQIKATIQLPASKSISNRALIIHALSKGDDVLSNLSDCDDTQVMIKAL
type: DOMAIN
name: Enolpyruvate_Tfrase_dom
description: Enolpyruvate transferase domain

phrase: KIKETDRIEALKTEMKKL
type: CONSERVED_SITE
name: EPSP_synthase_CS
description: 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site
Protein sequence:
MSVNIPSNSVPSGASRFQVHVINEGHGSGAAMSDSTDPPHYEETSFGDEAQNRLKISFRPGNQECYENFLQTGETAKTDTTFHAYDSHTNTYYLQTFGHNTMDAVPKIEYYRNTGSVSGPKVNRPSLQEIHEQLAKNVAVAPGSADRVANGDGMPGDEQAENKEEDVTGVVKFGWVKGVLVRCMLNIWGVMLFIRLSWIVGEAGIGLGVIIIGLSVVVTTLTGISMSAICTNGVVRGGGAYYLISRSLGPEFGGSIGLIFRFANAVRVAMYVVGFAETVVDLLKESDSMMVDPTNDIRIIGSITVVILLGISVAGMEWEAKAQVILLVILLIGIANFFIGTVIPSNNEKKSRGFFNYQASIFAENFGPSFTEGEGFFSVFAIFFPAATGILAGANISGDLEDPQDAIPRGTMLAIFITTVAYIGVAICVRACVVRDATGSMNDTVVSGMNCNGSAACGLGYDFSRCQHEPCQYGLMNNFQVMSMVSGFGPLITAGIFSATLSSALASLVSAPKVFQALCKDNIFKGLQFFAKGYGKNNEPLRGYFLTFVIAMAFILIAELNVIAPIISNFFLASYALINFSCFHASYAKSPGWRPAYGIYNMWVSLFGAILCCAVMFVINWWAAVITYVIELFLYIYVTYKKPDVNWGSSTQALSYVSALDNALELTTVEDHVKNFRPQCIVLTGGPMTRPALLDITHAFTKNSGLCICCEVFVGPRKLCVKEMNSGMAKKQAWLMKNKIKAFYAAVAADCFRDGVRSLLQASGLGRMKPNTLVIGYKKNWRKAPLSELENYVGIIHDAFDFEIGVVIVRISQGFDISPVLQVQDELEKLEQERLALEAAIKDNDCEEGKGGIRGLFKKAGKLNITKPAPKKDSNISTIQSMHVGEFNQKLVEASAQFKKKQGKGTIDVWWLFDDGGLTLLIPYILTLRKKWKDCKLRIYVGGKINRIEEEKISMASLLSKFRIKFADIHIIGDINIKPNKESWKVFEEMIEPYRLHESHKDLTTAEKLKRESPWKITDAELEAVKEKSYRQVRLNELLQEHSRAANLIVLSLPVARKGSISDLLYMAWLEILTKNLPPVLLVRGNHKNVLTFYS

Annotated regions:
phrase: GVLVRCMLNIWGVMLFIRLSWIVGEAGIGLGVIIIGLSVVVTTLTGISMSAICTNGVVRGGGAYYLISRSLGPEFGGSIGLIFRFANAVRVAMYVVGFAETVVDLLKESDSMMVDPTNDIRIIGSITVVILLGISVAGMEWEAKAQVILLVILLIGIANFFIGTVIPSNNEKKSRGFFNYQASIFAENFGPSFTEGEGFFSVFAIFFPAATGILAGANISGDLEDPQDAIPRGTMLAIFITTVAYIGVAICVRACVVRDATGSMNDTVVSGMNCNGSAACGLGYDFSRCQHEPCQYGLMNNFQVMSMVSGFGPLITAGIFSATLSSALASLVSAPKVFQALCKDNIFKGLQFFAKGYGKNNEPLRGYFLTFVIAMAFILIAELNVIAPIISNFFLASYALINFSCFHASYAKSPGWRPAYGIYNMWVSLFGAILCCAVMFVINWWAAVITYVIELFLYIYVTYKKPDVNWGSSTQALSYVSALDNALELTTVEDHVKNFRPQC
type: DOMAIN
name: AA-permease/SLC12A_dom
description: Amino acid permease/ SLC12A domain

phrase: DSHTNTYYLQTFGHNTMDAVPKIEYYRNTGSVSGPKVNRPSLQEIHEQLAKNVAVAPGSADRVANGD
type: DOMAIN
name: AA_permease_N
description: Amino acid permease, N-terminal

phrase: RPALLDITHAFTKNSGLCICCEVFVGPRKLCVKEMNSGMAKKQAWLMKNKIKAFYAAVAADCFRDGVRSLLQASGLGRMKPNTLVIGYKKNWRKAPLSELENYVGIIHDAFDFEIGVVIVRISQGFDISPVLQVQDELEKLEQERLALEAAIKDNDCEEGKGGIRGLFKKAGKLNITKPAPKKDSNISTIQSMHVGEFNQKLVEASAQFKKKQGKGTIDVWWLFDDGGLTLLIPYILTLRKKWKDCKLRIYVGGKINRIEEEKISMASLLSKFRIKFADIHIIGDINIKPNKESWKVFEEMIEPYRLHESHKDLTTAEKLKRESPWKITDAELEAVKEKSYRQVRLNELLQEHSRAANLIVLSLPVARKGSISDLLYMAWLEILTKNLPPVLLVRGNHKNVLTFY
type: DOMAIN
name: SLC12_C
description: SLC12A transporter, C-terminal
Protein sequence:
MRKRISAIINKLNISIMMMIVVLMIGCGQQPEAGKTGAAGGEKQGAGSLSEVLMEVGKSAENAFYSFLELVSDTLGFTAKSTTKKEDVGGYFNSLGGKLGEASNELEQVAKNSEAGIEKNDASKNPIRSAVNAAKKTLEALKGYLDSLGTVGDSNPVGWASNNAQGAAVDEAELKKAYKALKGIMDTAEGAGVARPEVGNIAVKVGNGTDNKDGAKILATDGAAAVGDAGKAAAILTTVSGKEMLASIVNSTEDKAVKITGNVTVETTPLEFAVGGNGAHLSQNANSKAAAVAGGIALRSLVKGGKLAADNNDDDKASQGVGITAANKLLVAVEDIIKKTVKNVLEKAKGEIDKARDPKPAGQQ

Annotated regions:
Protein sequence:
MTMNMFEQFMSPELLMIPTALLSMLVPVLLIHHNPKLLGNRMTTAIAWLLMTIMSNMTNQLTPSGQKWCQVLTSLLLMILLSNLLGLLPYTFTSTSQLSMNMAMAIPLWMATIITGMTKKPSITLAHMLPEGSPTPLIPFMIIIETISLLMRPLALGVRLTANITAGHLLMTMVSTTTLNFITSHITLSIMTYLLLFLLCILELAVACIQAYVFVLLIILYLQENT

Annotated regions:
phrase: ALGVRLTAN
type: ACTIVE_SITE
name: ATP_synth_F0_asu_AS
description: ATP synthase, F0 complex, subunit A, active site
Protein sequence:
MYVFNFYPIPRKSINFRSDVDDLGFLRPWSPQEESGCKKQYEAWYSSYLPIVVRRRCRWEKENPRRNSHLLQRFVRKGIPHTFRKELWLRSCPSRADGVWQRHEVPDEVIKQIKLDLPRTFPDNKFLKTEGTRKTLGRALFAVAEHIPSVGYCQGLNFVAGVILLVVNDESRAIDLLVHLVSQRQEYYGKNMIGLRRDMHVLHSLLREHCPRVVVTLEKLDVGLDMLVGKWFVCWFVESLPMETVLRLWDCLIYEGDEWLFRIAVALFRSNMIAISSCESIDQLMTEVQNIGTSKAALYCHQLILKSAALSITNKSIEALRADAELAIPE

Annotated regions:
phrase: GIPHTFRKELWLRSCPSRADGVWQRHEVPDEVIKQIKLDLPRTFPDNKFLKTEGTRKTLGRALFAVAEHIPSVGYCQGLNFVAGVILLVVNDESRAIDLLVHLVSQRQEYYGKNMIGLRRDMHVLHSLLREHCPRVVVTLEKLDVGLDMLVGKWFVCWFVESLPMETVLRLWDCLIYE
type: DOMAIN
name: Rab-GAP-TBC_dom
description: Rab-GAP-TBC domain

phrase: VRKGIPHTFRKELWLRSCPSRADGVWQRHEVPDEVIKQIKLDLPRTFPDNKFLKTEGTRKTLGRALFAVAEHIPSVGYCQGLNFVAGVILLVVNDESRAIDLLVHLVSQRQEYYGKNMIGLRRDMHVLHSLLREHCPRVVVTLEKLDVGLDMLVGKWFVCWFVESLPMETVLRLWDCLIYEGDEWLFRIAVALFRSNMIAISSC
type: DOMAIN
name: Rab-GAP-TBC_dom
description: Rab-GAP-TBC domain

phrase: HEVPDEVIKQIKLDLPRTFPDNKFLKTEGTRKTLGRALFAVAEHIPSVGYCQGLNFVAGVILLVVNDESRAIDLLVHLVSQRQEYYGKNMIGLRRDMHVLHSLLREHCPRVVVTLEKLDVGLDMLVGKWFVCWFVESLPMETVLRLWDCLIYEGDEWLFRIAVALFRS
type: DOMAIN
name: Rab-GAP-TBC_dom
description: Rab-GAP-TBC domain
Protein sequence:
MAKKNAQIPSKPLEQGIVPPHSLEAEQSVLGGILIHPAHWDSISDMLIADDFYLAAHRVIFQEMENLLRQGKPIDLINLYEFLREKNLSEDVGGFAYLAELSKNTPSVSNIVSYAAIVRDRAILRDLISVSNDVAQSCYTTKGMEVKDILDEAERKVFAISEKRTTSNEGPQNICAILEKTIDRIELLSKTEGHNGITGVSTGFDALDKKTAGLQPSDLIIVAARPSMGKTTFAMNLCENAALKSDKPVLVFSLEMPAEQIMMRSLASLSRVDQTKIRTGQGLDQSDWSKIGSTMGLFANKPNLYIDDSSGLTPTELRSRARRVYRENGGLSLIMVDYLQLMRAPGFADNRTLEIAEISRSLKALAKELEVPVIALSQLNRTLENRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYNENSEDKGVAEIIIGKQRNGPIGRVRLAFRGQFSRFDNLAEQRDIRDDY

Annotated regions:
phrase: PSDLIIVAARPSMGKTTFAMNLCENAALKSDKPVLVFSLEMPAEQIMMRSLASLSRVDQTKIRTGQGLDQSDWSKIGSTMGLFANKPNLYIDDSSGLTPTELRSRARRVYRENGGLSLIMVDYLQLMRAPGFADNRTLEIAEISRSLKALAKELEVPVIALSQLNRTLENRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYNENS
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: GVSTGFDALDKKTAGLQPSDLIIVAARPSMGKTTFAMNLCENAALKSDKPVLVFSLEMPAEQIMMRSLASLSRVDQTKIRTGQGLDQSDWSKIGSTMGLFANKPNLYIDDSSGLTPTELRSRARRVYRENGGLSLIMVDYLQLMRAPGFADNRTLEIAEISRSLKALAKELEVPVIALSQLNRTLENRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYNENSEDKGVAEIIIGKQRNGPIGRVRLAFRGQFSRFD
type: DOMAIN
name: DNA_helicase_DnaB-like_C
description: DNA helicase, DnaB-like, C-terminal

phrase: PPHSLEAEQSVLGGILIHPAHWDSISDMLIADDFYLAAHRVIFQEMENLLRQGKPIDLINLYEFLREKNLSEDVGGFAYLAELSKNTPSVSNIVSYAAIVR
type: DOMAIN
name: DNA_helicase_DnaB-like_N
description: DNA helicase, DnaB-like, N-terminal

phrase: GVSTGFDALDKKTAGLQPSDLIIVAARPSMGKTTFAMNLCENAALKSDKPVLVFSLEMPAEQIMMRSLASLSRVDQTKIRTGQGLDQSDWSKIGSTMGLFANKPNLYIDDSSGLTPTELRSRARRVYRENGGLSLIMVDYLQLMRAPGFADNRTLEIAEISRSLKALAKELEVPVIALSQLNRTLENRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYNENSEDKGVAEIIIGKQRNGPIGRVRLAFRGQFSRFD
type: DOMAIN
name: DNA_helicase_DnaB-like_C
description: DNA helicase, DnaB-like, C-terminal

phrase: GHNGITGVSTGFDALDKKTAGLQPSDLIIVAARPSMGKTTFAMNLCENAALKSDKPVLVFSLEMPAEQIMMRSLASLSRVDQTKIRTGQGLDQSDWSKIGSTMGLFANKPNLYIDDSSGLTPTELRSRARRVYRENGGLSLIMVDYLQLMRAPGFADNRTLEIAEISRSLKALAKELEVPVIALSQLNRTLENRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYNENSEDKGVAEIIIGKQRNGPIGRVRLAFRGQFSRFDNLAEQ
type: DOMAIN
name: DNA_helicase_DnaB-like_C
description: DNA helicase, DnaB-like, C-terminal
Protein sequence:
MSPSPFAPTIETIDYPFPPKPIPLSDAEKADYKASIKQLLIEKDAVLVAHYYTDPEIQALAEETGGCVSDSLEMARFGRDHPAKTLIVAGVKFMGETAKILSPEKTILMPTLEATCSLDLGCPIDKFSAFCDAHPDHTVVVYANTSAAVKARADWVVTSSIALEIVEHLDSEGKKIIWGPDRHLGSYIAKQTGAEMLMWQGDCIVHDEFKANALRDLKRVYPDAAILVHPESPASVVAMADAVGSTSQLIKAAQTMANERFIVATDRGIFYKMQQAAPGKTLIEAPTGGNGATCKSCAHCPWMAMNGLKAIEASLSDSDKTTHEIFVDEDLRVKALIPLTRMLDFAKTLNMKVKGNA

Annotated regions:
Protein sequence:
MGGQWSKCSLVGWPKVRERITQTPPAAEGVGAASQDLDRRGAITSNNTAFNNPDCAWLEAQEEGDVGFPVRPQVPLRPMTYKAAFDLSHFLKEKGGLDGLIYSQKRQDILDLWVYNTQGFFPDWQNYTPGPGTRFPLTFGWCFKLVPVDEAEVEEATEGENNSLLHPMCQHGVEDTEREVLMWKFDSRLALKHRAKELHPEFYKDC

Annotated regions:
Protein sequence:
MAFQFPDHFRFADTHEYASLDGDLVRVGISAFAVDQLGDIVFVDLPEVGDLLNRGTTFGSVESVKAVEDLHAPISGELVRINESVLSSPDELQNDPHGEGWLLVVRPADPAQLQDLMDAATYANKVAVE

Annotated regions:
phrase: LVRVGISAFAVDQLGDIVFVDLPEVGDLLNRGTTFGSVESVKAVEDLHAPISGELVRINESVLSSPDELQNDPHGEGWLLVV
type: DOMAIN
name: Biotin_lipoyl
description: Biotin/lipoyl attachment

phrase: GDLLNRGTTFGSVESVKAVEDLHAPISGE
type: BINDING_SITE
name: 2-oxoA_DH_lipoyl-BS
description: 2-oxo acid dehydrogenase, lipoyl-binding site
Protein sequence:
MIKKTTSFRLAIFGGSFDPIHYGHLICAMDCLEQISLNKIIFMPCSRSPFKKQNPVASALQRLEMIQLAIKPFKNFEVSSFEVQSPAPSYSIRTVQEFHKLYPHAELFWIIGSDQVPGLPRWKDYAELIQIVKFIVVSRSNYYPYEKRDYLVPLPKIRYVDISSTEIRERVKKELPIFHLLPQAVFQYIKENSIYIPNRTVHEK

Annotated regions:
phrase: IFGGSFDPIHYGHLICAMDCLEQISLNKIIFMPCSRSPFKKQNPVASALQRLEMIQLAIKPFKNFEVSSFEVQSPAPSYSIRTVQEFHKLYPHAELFWIIGSDQVPGLPRWKDYAELIQIVKFIVVSRSNYYPYEKRDYLVPLPKIRYVDISSTEIRE
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: AIFGGSFDPIHYGHLICAMDCLEQISLNKIIFMPCSRSPFKKQNPVASALQRLEMIQLAI
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain