nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTILNHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPPRHQNKDGSVDIDTLFRIGRGRAPTGEPAAAAEMTKWFNTNYHYMVPEFVKGQQFKLTWTQLLEEVDEALALGHKVKPVLLGPITYLWLGKVKGEQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQAWLDAYKPAYDALQGQVKLLLTTYFEGVTPNLDTITALPVQGLHVDLVHGKDDVAELHKRLPSDWLLSAGLINGRNVWRADLTEKYAQIKDIVGKRDLWVASSCSLLHSPIDLSVETRLDAEVKSWFAFALQKCHELALLRDALNSGDTAALAEWSAPIQARRHSTRVHNPAVEKRLAAITAQDSQRANVYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRTLRLDFKKGNLDANNYRTGIAEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPPIVIGDVSRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEEFDYPNEIGPGVYDIHSPNVPSVEWIEALLKKAAKRIPAERLWVNPDCGLKTRGWPETRAALANMVQAAQNLRRG

Annotated regions:
phrase: WPTTTIGSFPQTTEIRTLRLDFKKGNLDANNYRTGIAEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPPIVIGDVSRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEEFDYPNEIGPGVYDIHSPNVPSVEWIEALLKKAAKRIPAERLWVNPDCGLKTRGWPETRAALANMVQAAQ
type: DOMAIN
name: Met_Synth_C/arc
description: Cobalamin-independent methionine synthase MetE, C-terminal/archaeal

phrase: NHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELRARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPPRHQNKDGSVDIDTLFRIGRGRAPTGEPAAAAEMTKWFNTNYHYMVPEFVKGQQFKLTWTQLLEEVDEALALGHKVKPVLLGPITYLWLGKVKGEQFDRLSLLNDILPVYQQVLAELAKRGIEWVQIDEPALVLELPQAWLDAYKPAYDALQGQVKLLLTTYFEGVTPNLDTITALPVQGLHVDLVHGKDDVAELHKRLPSDWLLSAGLINGRNVWRADLTEKYAQIKDI
type: DOMAIN
name: Cbl-indep_Met_Synth_N
description: Cobalamin-independent methionine synthase MetE, N-terminal

phrase: PTTTIGSFPQTTEIRTLRLDFKKGNLDANNYRTGIAEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGWVQSYGSRCVKPPIVIGDVSRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPREDVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLQWGVEAFRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEEFDYPNEIGPGVYDIHSPNVPSVEWIEALLKKAAKRIPAERLWVNPDCGLKTRGWPETRAALANMVQAA
type: DOMAIN
name: Met_Synth_C/arc
description: Cobalamin-independent methionine synthase MetE, C-terminal/archaeal
Protein sequence:
MKNEVKSFIDFSSSEIHKALSECGADSYRLNQINDWIYSKYVQKWEDMANLPKDLLMKLSTLAPLHPLKEINCSGVGSDPTQKFLFLTSKKNKIESVLMRQGSRVTVCISSQSGCAVDCDFCATASMGFKQNLSTGEIVDQVLQLSNRSSLKITNVVFMGMGEPFLNYQKVVEAAKIMNEKMNLGSRRITISTAGIVSKXXQMADDKLPFKLAVSLNAPNDEIRKXIMPLTXTNPINELLKAAEYYXNKLRRFITFEYVLLENVNSDEKCARQLIHLLKNIPCKVNLIPYNEIESXYKRPSNISXNNFERILKEAPFTTTVRWSKGTNIDAGCGQLAVRVXNEKLRFIS

Annotated regions:
phrase: QGSRVTVCISSQSGCAVDCDFCATASMGFKQNLSTGEIVDQVLQLSNRSSLKITNVVFMGMGEPFLNYQKVVEAAKIMNEKMNLGSRRITISTAGIVSKXXQMADDKLPFKLAVSLNAPNDEIRKXIMPLTXTNPINELLKAAEYYXNKLRRFITFEYVLLENVNSDEKCARQLIHLLKNIPCKVNLIPYNEIESXYKRPSNISXNNFERILKEAPFTTTVRWSKGTNI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SSQSGCAVDCDFCATASMGFKQNLSTGEIVDQVLQLSNRSSLKITNVVFMGMGEPFLNYQKVVEAAKIMNEKMNLGSRRITISTAGIVSKXXQMADDKLPFKLAVSLNAPNDEIRKXIMPLTXTNPINELLKAAEYYXNKLRRFITFEYVLLENVNSD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: IDFSSSEIHKALSECGADSYRLNQINDWIYSKYVQKWEDMANLPKDLLMKLSTL
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MQESQETHISNHLDEIVAAVSITPRKKLLNQLLQRALFQPPREKLRLSEEKAKSYASSHEYKKALHELVHCMALTRICYGDSHWKLAEAHVNLAKGYLQLKGMSLRAKQHAEKAKEILTSSVAPPYSDNTDVFKCSVELFHTLGQALLSLQKFKEASKNLTKAEILSKEMLQCGKIIKEEWMEIQARIKLSFAQVYQGQKKSKEALPHYQEALEYTEISRGEKSLECVPILRELAAAEQALGFHDASINNLIQAHLIVLRGSPSREEAATSAHSVACAAIASGRPEHHDVAEQYFQDSMANLKDAEGKETAKFLSIQDDYCHFLQVTGQDEKATSIFRESLEAKVAVFGDFSPEVAETYRLLGVADLAQGNQTGAHKKLKKCLQIQTLLYGPQDKRTLATQQTMDILSKAPEVPARPRPSPGAKAAFCAGGRPYSVPGRTRPSAAD

Annotated regions:
phrase: AETYRLLGVADLAQGNQTGAHKKLKKCLQIQTL
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: VELFHTLGQALLSLQKFKEASKNLTKAEILSKE
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat

phrase: ARIKLSFAQVYQGQKKSKEALPHYQEALEYTEI
type: REPEAT
name: TPR_rpt
description: Tetratricopeptide repeat
Protein sequence:
MTNLRKSHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGMCLILXILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYMHANGASMFFICLYMHAGRGLYYGSYTFLETWNIGVILLLTVMATAFMGYDLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIMAIAMVHLLFLHETGSNNPTGISSDMDKIPFHPYYTIKDILGALLLILALMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAFSILILALIPLLHTSKQRSMIFRPLSQCLFWTLVADLLTLTWIGGQPVEHPYIIIGQMASIMYFLLILVLMPTAGTIENKLLKW

Annotated regions:
phrase: IDLPAPSNISSWWNFGSLLGMCLILXILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYMHANGASMFFICLYMHAGRGLYYGSYTFLETWNIGVILLLTVMATAFMGYDLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIMAIAMVHLLFLHET
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: PLMKIVNNAFIDLPAPSNISSWWNFGSLLGMCLILXILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYMHANGASMFFICLYMHAGRGLYYGSYTFLETWNIGVILLLTVMATAFMGYDLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIMAIAMVHLLFLHETGS
type: DOMAIN
name: Cytochrome_b_N_euk/bac
description: Cytochrome b/b6, N-terminal domain, eukaryotic/bacterial

phrase: MTNLRKSHPLMKIVNNAFIDLPAPSNISSWWNFGSLLGMCLILXILTGLFLAMHYTSDTTTAFSSVAHICRDVNYGWIIRYMHANGASMFFICLYMHAGRGLYYGSYTFLETWNIGVILLLTVMATAFMGYDLPWGQMSFWGATVITNLLSAIPYIGTNLVEWIWGGFSVDKATLTRFFAFHFILPFIIMAIAMVHLLFLHETGSNNP
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: NPTGISSDMDKIPFHPYYTIKDILGALLLILALMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAFSILILALIPLLHTSKQRSMIFRPLSQCLFWTLVADLLTLTWIGGQPVEHPYIIIGQM
type: DOMAIN
name: Cytochrome_b_C_euk/bac
description: Cytochrome b/b6, C-terminal domain, eukaryotic/bacterial

phrase: GISSDMDKIPFHPYYTIKDILGALLLILALMLLVLFTPDLLGDPDNYTPANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAFSILILALIPLLHTSKQRSMIFRPLSQCLFWTLVADLLTLTWIGGQPVEHPYIIIGQMASIMYFLLILVLMPTAGTIENKLLK
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: PANPLNTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAFSILILALIPLLHTSKQRSMIFRPLSQCLFWTLVADLLTLTWIGGQPVEHPYIIIGQMASIMY
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal
Protein sequence:
MPKVVSRSVVCSDTRDREEYDDGEKPLHVYYCLCGQMVLVLDCQIEKLPMRPRDKARVIDAAKHAHKFCNVEEDEAVYLKRSEGIERQYRKKCGKCGLLLFYQHQMKSTQTTFIVDGALVKFGQGFGNTSVYSQKQETPKKVRVMMTKRTKDMGKFSSVTVSTIDEEEEEIEAREVADSYAQNAKVIEKQLERKGMSKRRLQEPAELEAKKAKMKGTLIDNQFK

Annotated regions:
Protein sequence:
MMGCFALQTVDTELTADSVEWCPLQGCRHLLACGTYQLRRPEDRPAGPQNKGGMEVKEPQVRLGRLFLYSFNDNNSIHPLVEVQRKDTSAILDMKWCHIPVAGHALLGLADASGSIQLLRLVESEKSHVLEPLSSLALEEQCLALSLDWSTGKTGRAGDQPLKIISSDSTGQLHLLMVNETRPRLQKVASWQAHQFEAWIAAFNYWHPEIVYSGGDDGLLRGWDTRVPGKFLFTSKRHTMGVCSIQSSPHREHILATGSYDEHILLWDTRNMKQPLADTPVQGGVWRIKWHPFHHHLLLAACMHSGFKILNCQKAMEERQEATVLTSHTLPDSLVYGADWSWLLFRSLQRAPSWSFPSNLGTKTADLKGASELPTPCHECREDNDGEGHARPQSGMKPLTEGMRKNGTWLQATAATTRDCGVNPEEADSAFSLLATCSFYDHALHLWEWEGN

Annotated regions:
phrase: RLQKVASWQAHQFEAWIAAFNYWHPEIVYSGGDDGLLRGW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: PGKFLFTSKRHTMGVCSIQSSPHREHILATGSYDEHILLW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: MKQPLADTPVQGGVWRIKWHPFHHHLLLAACMHSGFKIL
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: SKRHTMGVCSIQSSPHREHILATGSYDEHILLWDTRNMKQPL
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: GKFLFTSKRHTMGVCSIQSSPHREHILATGSYDEHILLW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: LATGSYDEHILLWD
type: CONSERVED_SITE
name: WD40_repeat_CS
description: WD40 repeat, conserved site
Protein sequence:
MELKILEKSDDEMKMEIAGESHTLLNMLKIILLEDERVHTASYDMKHVTISEPVLFIKTENADPIDVVKAAVAKLITECEEFVTVFNKAVE

Annotated regions:
phrase: MKMEIAGESHTLLNMLKIILLEDERVHTASYDMKHVTISEPVLFIKTENADPIDVVKAAVAKLITECEE
type: DOMAIN
name: RBP11-like_dimer
description: DNA-directed RNA polymerase, RBP11-like dimerisation domain

phrase: IAGESHTLLNMLKIILLEDERVHTASYDMKH
type: CONSERVED_SITE
name: RNA_pol_Rpb11_13-16kDa_CS
description: DNA-directed RNA polymerase Rpb11, 13-16kDa subunit, conserved site
Protein sequence:
MSETLSNIVSKNMTNDKNSLESMNISSSSSAEENPKKQAKKXKERGPDPSANPFHLSGDVDFFLLRDQERNKALSERQQQKTMRVHEKMTYSSKVLAKHTSLRRQLQLEDKQEDLEARTEADHLRAFRDYNTWKLTLTKEKNVEPENMSGYLKQKRQMFLLQYTLDCKRREIQRLETLATKEEARLQQAEKSLAKDAALFDEFLRENDCSSVQAMKAAEKETKAKIEKILEIRDLTTQIVNIKSEISRFEDTLQHYKVYKDFLYKLSPKEWLEEQEKKHLFLKNAKEISEASKDGSVNSTPGDKGPGIKGKASSVWAKEGQGTKKPWRFLRLGRSLSYLSSPQQGSQPSESSGGNSRGSNSPIPLTQEDTDSDGEEPQLYFTEPQQLLDVFRELEEQNLSLIQNRQEMEETLEELSRTLKHTQIRMDREVNQLKQWVSTMMMSITKEEDTAAELELKARVFHFGEYKGDQQDKLLESLNWKVLDVYRNCIGTQQEANLGTVQMLTIIEHQLDELLENLERVPQVKIEQAERAKEKERRIRLREEKLQMQKILQEERLQRARARAQAEIKKKRGRTLVCRSQPPVHRIKQESEHTLMDKEKEELLFFFT

Annotated regions:
phrase: YLKQKRQMFLLQYTLDCKRREIQRLETLATKEEARLQQAEKSLAKDAALFDEFLRENDCSSVQAMKAAEKETKAKIEKILEIRDLTTQIVNIKSEISRFEDTLQHYKVYKDFLYKLSP
type: DOMAIN
name: DUF4200
description: Domain of unknown function DUF4200
Protein sequence:
MTSAPDDLRTTTELSASRPAAPVPHRGRGRLAEVPHYTGLVLGVFAVACLLWSLSPALRYLTHAPRHYIDDYYFDAPDTSLVWALVVGLLAAATAGRKRIAWWLLVIYLMTWVLDNVVAFLADRDVHALVAAVVHVAVIGVLIAAWPEFYTRVRRGAGRKALLALVGGAALGCLLGWGLVEMFPGSLPAGAQRPLWAVYRVTGAILVENEQFDGSPHHFVNFLLGLFGAVALLSAFTVLLRSQRADNAMTGLDESALRGLLARSDVEDSLGYFATRRDKAVVFAPSGKAAITYRVELGVCLASGDPIGIKEAWPQAIDAWLRLSDRFGWAPAVMGASELGATAYRRAGLSVLRLGDEAVLDTRNFSLAGAEMKPVRQAVNRLRRQGMGVRIRRHSDIPADEFAQIVARAEAWRDTENERGFSMALGRLGDPLDGDCLLVEAVDSDDRVLAMLSMVPWGRTGVSLELMRRDPLGPNGVMELMISQLALTSDQYGITKISLNFAVFRSVFEEGGRIGAGPILRAWRGVLLFFSRWWQLEALYRSNVKYQPIWVPRFFLFEERRQLPRVAMASGLAEGFLPRFGAEPDPATHTGRHPAVPATVIGLHADGSAPEPPESEAELQLARRPEQVRVRMNKLDRLAATGIDAYPVAYPPTHTVAAARRSPRGTTVRVCGRLLRIRDYGGVVFAVVRDWSDDIQLVLDRERLGAKRCAEFGEFFDLGDLIEVSGRIGRSRRGELSLLVADWRMLGKCLHPLPDKWKGLADPEARVR

Annotated regions:
phrase: TVRVCGRLLRIRDYGGVVFAVVRDWSDDIQLVLDRERLGAKRCAEFGEFFDLGDLIEVSGRIGRSRRGELSLLVADWRMLGKCLHPLPDKWKGLADPEARV
type: DOMAIN
name: Lys-tRNA-ligase_II_N
description: Lysine-tRNA ligase, class II, N-terminal

phrase: GLLARSDVEDSLGYFATRRDKAVVFAPSGKAAITYRVELGVCLASGDPIGIKEAWPQAIDAWLRLSDRFGWAPAVMGASELGATAYRRAGLSVLRLGDEAVLDTRNFSLAGAEMKPVRQAVNRLRRQGMGVRIRRHSDIPADEFAQIVARAEAWRDTENERGFSMALGRLGDPLDGDCLLVEAVDSDDRVLAMLSMVPWGRTGVSLELMRRDPLGPNGVMELMISQLALTSDQYGITKISLNFAVFRSVFEEGGRIGAGPILRAWRGVLLFFSRWWQLEALYRSNVKYQPIWVPRFF
type: DOMAIN
name: LPG_synthase_C
description: Phosphatidylglycerol lysyltransferase, C-terminal

phrase: VRVCGRLLRIRDYGGVVFAVVRDWSDDIQLVLDRERLGAKRCAEFGEFFDLGDLIEVSGRIGRSRRGELSLLVADWR
type: DOMAIN
name: NA-bd_OB_tRNA
description: OB-fold nucleic acid binding domain, AA-tRNA synthetase-type

phrase: RLAEVPHYTGLVLGVFAVACLLWSLSPALRYLTHAPRHYIDDYYFDAPDTSLVWALVVGLLAAATAGRKRIAWWLLVIYLMTWVLDNVVAFLADRDVHALVAAVVHVAVIGVLIAAWPEFYTRVRRGAGRKALLALVGGAALGCLLGWGLVEMFPGSLPAGAQRPLWAVYRVTGAILVENEQFDGSPHHFVNFLLGLFGAVALLSAFTV
type: DOMAIN
name: tRNA-synt_2_TM
description: Lysyl-tRNA synthetase, N-terminal transmembrane region
Protein sequence:
MKVTPEKKKGSDTPMMRQYLEVKERYPEYLLLFRVGDFYESFYEDARKVSEALNIVLTRRSNGASADIPMAGFPHHACEGYIARLVKKGFKVTVCDQVEDPSQAKGLVRREITDIVTPGVTYSDEILDDKHNNYLCALCFMKKGRERRAGVAFIDVTTAEFRIADLQPEQVKDMLQSIQPSEILLSSRDKSYSDTVSRILPQEVVVTILDDWMFSEESASQVIERHFKTHSLKGFGIDSAFAARVAAGVVLHYLADTRQNRLQYITRIALVDARDHMTLDLQTKRNLEIISSMQDGSTSGSLLQVIDKTCNPMGARLLRRWLLRPLKRIDAIQARLDAVEVLIEEGAVRKALAEGLGGIHDLERALSRIATFRSMPREVRSLGSSLQKLPAIQALLKDSGSDRLKKLVSGLDLLDEITSIIESAIDPEAGAKLRDGGYIRSGYNAELDLLRSVSSNAKSGLMEIQQAERRKTAISTLKIQYNRVFGYYIEVSKANSDKVPDYYEKKQTLVNAERYTIAELKEYEVKILNADEKSQMLEQELFRDLCVRITACSKEIQQNAEIVAELDCLHSYACCSEAYGYVKPEVKEHGNLSIKNGRHPVLERILHVDEPYVPNDCFFDKKQRMLMVTGPNMAGKSSYLRQNGLIVLLAQVGCFVPADAAEIGLVDRIFTRVGASDNLTSGESTFLVEMNEAANILNNATGKSLILLDEIGRGTSTYDGMSIAWAMSEYIQSVVGARTLFATHYHELAELEERFDSISNYNATVVETADKVVFLRKIVRGASDNSYGIEVARMAGMPSEVIQRAKEILSGMEKRDIMISFGKECAGTIEPQSRQIYLFEEEERKLKNAIEALNINTMTPLDALLELKKLQDLAGGDG

Annotated regions:
phrase: SLILLDEIGRGTSTYD
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: QTKRNLEIISSMQDGSTSGSLLQVIDKTCNPMGARLLRRWLLRPLKRIDAIQARLDAVEVLIEEGAVRKALAEGLGGIHDLERALSRIATFRSMPREVRSLGSSLQKLPAIQALLKDSGSDRLKKLVSGLDLLDEITSIIESAIDPEAGAKLRDGGYIRSGYNAELDLLRSVSSNAKSGLMEIQQAERRKTAISTLKIQYNRVFGYYIEVSKANSDKVPDYYEKKQTLVNAERYTIAELKEYEVKILNADEKSQMLEQELFRDLCVRITACSKEIQQNAEIVAELDCLHSY
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: STSGSLLQVIDKTCNPMGARLLRRWLLRPLKRIDAIQARLDAVEVLIEEGAVRKALAEGLGGIHDLERALSRIATFRSMPREVRSLGSSLQKLPAIQALLKDSGSDRLKKLVSGLDLLDEITSIIESAIDPEAGAKLRDGGYIRSGYNAELDLLRSVSSNAKSGLMEIQQAERRKTAISTLKIQYNRVFGYYIEVSKANSDKVPDYYEKKQTLVNAERYTIAELKEYEVKILNADEKSQMLEQELFRDLCVRITACSKEIQQNAEIVAELDCLHSYACCSEAYGYVKPEVKEHGNLSIKNGRHPVLER
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: QRMLMVTGPNMAGKSSYLRQNGLIVLLAQVGCFVPADAAEIGLVDRIFTRVGASDNLTSGESTFLVEMNEAANILNNATGKSLILLDEIGRGTSTYDGMSIAWAMSEYIQSVVGARTLFATHYHELAELEERFDSISNYNATVVETADKVVFLRKIVRGASDNSYGIEVARMAGMPSEVIQRAKEIL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: NYLCALCFMKKGRERRAGVAFIDVTTAEFRIADLQPEQVKDMLQSIQPSEILLSSRDKSYSDTVSRILPQEVVVTILDDWMFSEESASQVIERHFKTHSLKGFGIDSAFAARVAAGVVLHYLADTRQNRLQY
type: DOMAIN
name: DNA_mmatch_repair_MutS_con_dom
description: DNA mismatch repair protein MutS, connector domain

phrase: MVTGPNMAGKSSYLRQNGLIVLLAQVGCFVPADAAEIGLVDRIFTRVGASDNLTSGESTFLVEMNEAANILNNATGKSLILLDEIGRGTSTYDGMSIAWAMSEYIQSVVGARTLFATHYHELAELEERFDSISNYNATVVETADKVVFLRKIVRGASDNSYGIEVARMAGMPSEVIQRAKEILSG
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: GYNAELDLLRSVSSNAKSGLMEIQQAERRKTAISTLKIQYNRVFGYYIEVSKANSDKVPDYYEKKQTLVNAERYTIAELKEYEVKILNAD
type: DOMAIN
name: DNA_mismatch_repair_MutS_clamp
description: DNA mismatch repair protein MutS, clamp

phrase: TPMMRQYLEVKERYPEYLLLFRVGDFYESFYEDARKVSEALNIVLTRRSNGASADIPMAGFPHHACEGYIARLVKKGFKVTVCDQVEDPSQAKGLVRREITDIVTPGVTYS
type: DOMAIN
name: DNA_mismatch_repair_MutS-lik_N
description: DNA mismatch repair protein MutS-like, N-terminal
Protein sequence:
MRVRGIPRNWPQWWIWGILGFWVIITCRVVGQLWVTVYYGVPVWTEAKTTLFCASDAKAYDKEVHNVWATHACVPTDPNPQEIVLENITENFNMWKNDMADQMHEDIISLWDQSLKPCVKLTPLCVTLNCTNAKINVTSVSEDSRNMTEKIKNCSFTTTTEIRDKKQQVYALFYRSDVVPLNSSEHSKANYDEYILINCNTSTITQACPKVTFDPIPLHYCAPAGYAILKCNNKTFNGTGPCLNVSTVQCTHGIKPVVSTQLLLNGSLAEEEIIIKSKNLTDDTKTIIVHLNKSIEIVCTRPGNNTRKSIRIGPGQTFFATGDIIGDIREAHCNLSKEAWNRTLDQIKRKLKEHFSEIEFAPSSGGDPEVATHSFNCRGEFFYCNTTKLFNGNYTLSNETIILPCRIKQIINMWQGVGRAMYAPPIAGNITCNSSITGLLLTHGKEPGHNDTEIFRPTGGNMKDNWRNELYKYKVVEIKPLGVAPTNAKRRVVEREKRAVGIGAVLLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQTRVLAIERYLKDQQLLGLWGCSGKLICTTNVPWNSSWSNKSQEDIWENMTWMQWDREISNYTSTIYRLLEDSQNQQEKNEKDLLALDSWKNLWNWFNITNWLWYIKIFIIIVGGLIGLRIVLGVLAIVKRVRQGYSPLSFQTLIPSPRGLDRLGRIEEEGGEQDKDRSIRLVNGFLALAWEDLRNLCLFSYHQLRDFILIVARA

Annotated regions:
phrase: VQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQTRVLAIERYLKDQQLLGLWGCSGKLICTTNVPWNSSWSNKSQEDIWENMTWMQWDREISNYTSTIYRLLEDSQNQQEKNEKDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQTRVLAIERYLKDQQLLGLWGCSGKLICTTNVPWNSSWSNKSQEDIWENMTWMQWDREISNYTSTIYRLLEDSQNQQEKNEKDLLALDSWKNLWNWFNITNWLWYIKIFIIIVGGLIGLRIVLGVLAIVKRVRQGYSPLSFQT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWTEAKTTLFCASDAKAYDKEVHNVWATHACVPTDPNPQEIVLENITENFNMWKNDMADQMHEDIISLWDQSLKPCVKLTPLCVTLNCTNAKINVTSVSEDSRNMTEKIKNCSFTTTTEIRDKKQQVYALFYRSDVVPLNSSEHSKANYDEYILINCNTSTITQACPKVTFDPIPLHYCAPAGYAILKCNNKTFNGTGPCLNVSTVQCTHGIKPVVSTQLLLNGSLAEEEIIIKSKNLTDDTKTIIVHLNKSIEIVCTRPGNNTRKSIRIGPGQTFFATGDIIGDIREAHCNLSKEAWNRTLDQIKRKLKEHFSEIEFAPSSGGDPEVATHSFNCRGEFFYCNTTKLFNGNYTLSNETIILPCRIKQIINMWQGVGRAMYAPPIAGNITCNSSITGLLLTHGKEPGHNDTEIFRPTGGNMKDNWRNELYKYKVVEIKPLGVAPTNAKRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MNPIAFHVGNLAIRWYGVIISMGTALGLLLAMYNCKIREASYDEFINMFLIAFPSAIIGARLYYVIFEFEDYRDNLINIFNTRQGGLAIHGGIIFGVLAVYIYLKYRKESFFEYVDVAAPSIILGQAIGRWGNFFNSEAHGGPVTKEFISKFPQFIQNGMFIEGTYYHPTFLYESIWNFIICIFLVYLLKKTKKKGIVFMAYIGLYSLGRFFIEGLRTDSLYLGSIRVAQLISVLGIILSIFFIYNIIKKEKRY

Annotated regions:
Protein sequence:
MATDSWALAVDEQEAAVKSMSNLQIKEEKVKPDTNGVIKTNATPEKTDEEEKEDRAAQSLLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPAERYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKISEHIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQYYVLCNSRDEKFQALCNIYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIEKIAN

Annotated regions:
phrase: GFNRPSKIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPAERYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKISEHIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREEETLDTIKQ
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: TIKQYYVLCNSRDEKFQALCNIYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDE
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: EKFQALCNIYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRF
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: KIQENALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPAERYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKISEHIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFED
type: DOMAIN
name: DEAD/DEAH_box_helicase_dom
description: DEAD/DEAH box helicase domain

phrase: SWLAAELSKEGHQVALLSGEMVVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRF
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: KSFEELRLKPQLLQGVYAMGFNRPSKIQ
type: DOMAIN
name: RNA_helicase_DEAD_Q_motif
description: RNA helicase, DEAD-box type, Q motif

phrase: MMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPAERYPQCLCLSPTYELALQTGKVIEQMGKFHPELKLAYAVRGNKLERGQKISEHIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNI
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain
Protein sequence:
MERQLEAYCAHLRNERQVSEHTLLGYRRDLDKVIAYCKEHGIADWQALQIQQLRQLIARLHHHGQSSRSLARLLSAVRGLYRYLNREGLCQHDPATGLSAPKGERRLPKVLDTDRALQLLDGGVDDDFIARRDQAILELFYSSGLRLSELTNLDLDHLDLAAGLVQVLGKGGKARVLPVGRKAREALQAWYRLRGIGNPRDRAVFITRQGNRISPQAVRLRVKAAGERELGQHLHPHMLRHSFASHVLESSQDLRAVQELLGHADISTTQIYTHLDFQHLAAVYDSAHPRAKRSKGNDS

Annotated regions:
phrase: RLPKVLDTDRALQLLDGGVDDDFIARRDQAILELFYSSGLRLSELTNLDLDHLDLAAGLVQVLGKGGKARVLPVGRKAREALQAWYRLRGIGNPRDRAVFITRQGNRISPQAVRLRVKAAGERELGQHLHPHMLRHSFASHVLESSQDLRAVQELLGHADISTTQIYTHLDFQHLAAVY
type: DOMAIN
name: Integrase_catalytic
description: Integrase, catalytic domain

phrase: LEAYCAHLRNERQVSEHTLLGYRRDLDKVIAYCKEHGIADWQALQIQQLRQLIARLHHHGQSSRSLARLLSAVRGLYRYLNRE
type: DOMAIN
name: Integrase_SAM-like_N
description: Integrase, SAM-like, N-terminal

phrase: MERQLEAYCAHLRNERQVSEHTLLGYRRDLDKVIAYCKEHGIADWQALQIQQLRQLIARLHHHGQSSRSLARLLSAVRGLYRYL
type: DOMAIN
name: CB
description: Core-binding (CB) domain

phrase: LDTDRALQLLDGGVDDDFIARRDQAILELFYSSGLRLSELTNLDLDHLDLAAGLVQVLGKGGKARVLPVGRKAREALQAWYRLRGIGNPRDRAVFITRQGNRISPQAVRLRVKAAGERELGQHLHPHMLRHSFASHVLESSQDLRAVQELLGHADISTTQIYTHLDFQ
type: DOMAIN
name: Integrase_catalytic
description: Integrase, catalytic domain
Protein sequence:
MALTRNRPFVVVLLLGFVIMSTITIGAQSIGVCYGRNGNNLPSASQVINLYKSNGIGSMRIYDPNSDTLQALRGSDIELILDVPNTDLQSLASDASAAATWVQNNVVNYASEVKFRYIAVGNEVLPTGSNAQYAQYVLPAMKNVQSAITSAGLQDQIKVSTATFSAVLGKSYPPSEGSFSDDVSSFINPIISFLAENGSPLLANIYPYFSYTGDTQNIRLDYALFTASGVVVQDGSYQYQNLFDALLDALYAALEKAGGSNLKIVVSESGWPSEGGTAATVDNARTYYKNLINHVKGGTPRKSGAIETYLFAMFDENQKTGLETEKHFGLFTPGQESKYQISFS

Annotated regions:
Protein sequence:
MNNQKIRVGVLGFGGLGQAAARILQHKSEMCLVAVADQKGYAYNPKGLNPDVLIPTYHQQGSIGYLPEYGVSSNNSISDLISQGQVDGYFLALPNLPNTFMADVARQFISSGWRGVLVDALKRTSAVEQLLQLQTELSQGGITYLTGCGATPGLLTAAAAIAAQSFTEIHQVKITFGVGIANWEAYRATIREDIAHLPGFDVDKAKAMTDEEVEAFLDQTNGILTLENMEHADDIMLELAGICDRSQVSVGGVVDTRNSKKPLSTNVQITGRTFEGKISTHTFTLGDETSMAANVCGPAFGYLKTGIKLHQQNLHGLFTAAEVMPLFVR

Annotated regions:
phrase: KIRVGVLGFGGLGQAAARILQHKSEMCLVAVADQKGYAYNPKGLNPDVLIPTYHQQGSIGYLPEYG
type: DOMAIN
name: Glu/Leu/Phe/Val/Trp_DH_C
description: Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal
Protein sequence:
MIQMQSLLKVADNTGARTVMCIKVLGGSKRRFAGIGDVIKVAVKDAAPRGRIKKGEVYNAVIVRTAKGIRRSDGSLVKFDTNAAVILNNKLEPIGTRIFGPVTRELRTAKFMKIVSLAPEVI

Annotated regions:
phrase: AVIVRTAKGIRRSDGSLVKFDTNAAV
type: CONSERVED_SITE
name: Ribosomal_uL14_CS
description: Large ribosomal subunit protein uL14, conserved site
Protein sequence:
MSSAQDPFYIVKEEIQDSIDKLQSTFHKWERISPDMGDQAHVAKELVATCGSIEWQVDELEKAITVAAKDPSWYGIDEAELEKRRRWTSNARTQVRNVKSGVLAGKVSSGAGHASEVRRELMRMPNSGEASRYDQYGGRDDDGFVQSESDRQMLLIKQQDEELDELSKSVQRIGGVGLTIHDELVAQERIIDELDTEMDSTKNRLEFVQKKVGMVMKKAGAKGQMMMICFLLVLFIILFVLVFLT

Annotated regions:
phrase: MLLIKQQDEELDELSKSVQRIGGVGLTIHDELVAQERIIDELDTEMDSTKNRLEFVQKKVGM
type: DOMAIN
name: T_SNARE_dom
description: Target SNARE coiled-coil homology domain

phrase: DPFYIVKEEIQDSIDKLQSTFHKWERISPDMGDQAHVAKELVATCGSIEWQVDELEKAITVAAKDPSWYGIDEAELEKRRRWTSNARTQVRNV
type: DOMAIN
name: Syntaxin-6/10/61_N
description: Syntaxin 6/10/61, N-terminal

phrase: ESDRQMLLIKQQDEELDELSKSVQRIGGVGLTIHDELVAQERIIDELDTEMDSTKNRLEFVQKKVGM
type: DOMAIN
name: T_SNARE_dom
description: Target SNARE coiled-coil homology domain

phrase: QDEELDELSKSVQRIGGVGLTIHDELVAQERIIDELDTE
type: CONSERVED_SITE
name: Syntaxin/epimorphin_CS
description: Syntaxin/epimorphin, conserved site

phrase: IIDELDTEMDSTKNRLEFVQKKVGMVMKKAGAKGQMMMICFLLVLFIILFV
type: DOMAIN
name: T_SNARE_dom
description: Target SNARE coiled-coil homology domain