nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MENLFGAKRLTATVGGKEIIMETGRLANQADGAVWIQCGGTVVLCTVCTQPLEREISFFPLVVDYTEKMYAAGRIPGSFFRREIGRPSERETLVSRLIDRPLRPLFPKGFTNEVQILANVISADQENDSDVLALCGSSAAVMLSSVPFEAPVAGARVCRIDGEFVLNPTITEAAKADLNLVVAANRDALVMVEGEADFVPEEVIAQALEWAHREVQPIIDMQEKLRELAGKAKIEFVAPEEDTELKEKAEALATADLAAALQVREKMARKEAKKAVKEKVKAALLQDPAFAETPERLAALGDILSSLEKRIVRQRILKEGLRIDGRDTKTVRPIIIEAGALPRAHGSAIFSRGETKSLVVTTLGSTTDEQRMDSLTGDVTKRFMLHYNFPPYSVGEVKPVRVSRREIGHGALAERALRPVLPSPDSFPFTLRVVSETMESNGSSSMAAVCGGSLSLMDAGVPVKAPVAGIAMGLIKEDDQFIVLTDILGDEDALGDMDFKIAGTAEGVTAVQMDIKIDGLPAEVMGRALAQAREARLHILNEMAKVLPEPRQALSKYAPQLSVVEVNPEIIRVIIGPGGKNIKAITSATGASIDIEDSGRISIFAPTKESMDMAREMVMYYDQRPELGKNYTAKVRKIMEIGAIVEILPNCEALIHISQLDTSRVEKTEDVVQLGQDVEVKVIEINDGRVRASRKAVMLEAQGVEWDPADTARPPRKPRDRDDRGDRGGRGDRGDRGGRNGRGGDRRDRR

Annotated regions:
phrase: PVAGARVCRIDGEFVLNPTITEAAKADLNLVVAANRDALVMVEGEADFVPEEVIAQALEWAH
type: DOMAIN
name: ExoRNase_PH_dom2
description: Exoribonuclease, phosphorolytic domain 2

phrase: PVAGIAMGLIKEDDQFIVLTDILGDEDALGDMDFKIAGTAEGVTAVQMDIKIDGLPAEVMGRALAQARE
type: DOMAIN
name: ExoRNase_PH_dom2
description: Exoribonuclease, phosphorolytic domain 2

phrase: VRPIIIEAGALPRAHGSAIFSRGETKSLVVTTLGSTTDEQRMDSLTGDVTKRFMLHYNFPPYSVGEVKPVRVSRREIGHGALAERALRPVLPSPDSFPFTLRVVSETMESNGSSSMAAVCGGSLSLMDAGV
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1

phrase: KEIIMETGRLANQADGAVWIQCGGTVVLCTVCTQPLEREISFFPLVVDYTEKMYAAGRIPGSFFRREIGRPSERETLVSRLIDRPLRPLFPKGFTNEVQILANVISADQENDSDVLALCGSSAAVMLSSV
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1

phrase: ELGKNYTAKVRKIMEIGAIVEILPNCEALIHISQLDTSRVEKTEDVVQLGQDVEVKVIEINDGRVRASR
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: PELGKNYTAKVRKIMEIGAIVEILPNCEALIHISQLDTSRVEKTEDVVQLGQDVEVKVIEINDGRV
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: ELKEKAEALATADLAAALQVREKMARKEAKKAVKEKVKAALLQDPAFAETPERLAALGDILSSLEKRIVRQRILKEGLRIDGR
type: DOMAIN
name: PNPase_PH_RNA-bd_bac/org-type
description: Polyribonucleotide nucleotidyltransferase, RNA-binding domain

phrase: APQLSVVEVNPEIIRVIIGPGGKNIKAITSATGASIDIEDSGRISIFAPTKESMDMAREMVMYYD
type: DOMAIN
name: KH_dom
description: K Homology domain

phrase: VEVNPEIIRVIIGPGGKNIKAITSATGASIDIEDSGRISIFAPTKESMDMAREMV
type: DOMAIN
name: KH_dom_type_1
description: K Homology domain, type 1

phrase: GKNYTAKVRKIMEIGAIVEILPNCEALIHISQLDTSRVEKTEDVVQLGQDVEVKVIEINDGRVRASR
type: DOMAIN
name: S1_domain
description: S1 domain
Protein sequence:
MKAKLLYDRIWENFTDPMLHRIIGSVRILGLANLPIEQRQKYNTLLSKMTSIYSSAKVCFPNKTATCWALEPELTEVMASSRSYAKLLFAWEGWHNAVGVPLKPEYQAYVSLSNEAYKVDGFEDTGAYWRSWYDSSTFVEDLERLYQQLEPLYLNLHAFVRRGLYHRYGDKYINLQGPIPAHLLGNMWAQSWENIYDIVVPFPDKPNLDVTSTMVEKGWNVTHMFRVAEEFFTSLGLLPMPPEFWAESMLEKPDDGREVVCHASAWDFYNRIDFRIKQCTRVNMDQLFTVHHEMGHVQYYLQYKHLPVSLRRGANPGFHEAIGDVLALSVSTPGHLQKIGLLDSVTNDNESDINYLLKMALDKIAFLPFGYLVDQWRWRVFSGLTTPSQYNYDWWYLRTKYQGICPPIARNGAHFDPGAKFHIPSVTPYIRYFVSFVLQFQFHKALCAEAGYTEPLHYCDIYQSQQAGAKLREVLQAGASRRWQEVLKEMTGSETLDAGPLLEYFEPLTDWLKQQNQINGEVLGWPDFEWRPPVPDGYPEGIDNLTDEAEAEKFLEEYDRLGLVITNAYVEANWAYNTNITEENSKIMLEKNLELSSHTLQYGTRARQFDTSSFQKSSVKRLLEKLKDLGRAALPPADLDKYNNILLKMESAYSTAKVCQQNGSCLPLDPDLTELMASSRNYDNLLWAWKGWRDKAGRAVLPNFPEYVELSNKAAQLNGYADSGAYWRAWYETPSLEQDLEKIYLELQPLYLNLHAYVRRALYRHYGA

Annotated regions:
Protein sequence:
MSLFGSSPPNDGSAALNPAKTANSSRSTLFDNEAPTTRSGSALFADDDHDSPWDMPTPRKQRSRADLIRNLLPSGDVPESYIETFDAVVRTENRSTNGRITAGGVARTLAAAKLGADDQARIMGIIAPASASATGAGGGGDGAHGGEANSSAAAAAAAVGLGDLGRNEFNVLLALIGLVQEGEVASLDGVDERRRNLPQPKLQGLVNENVQPMLPNLSELGAKPPQRPVTPPKAPTPSPPKQQQQQQHQPPTLRKVSMEYPEDPWNAPDLHKGHNHGPLEHSTGHNGAADVPRSVANDLNGNDAVSYSTSPEVTTTSSALPGRTTSTFTTSQPPSGPSSIHNVAESIQESNGAWNYFPGSSSGGGFGEPADNAITGPFGDSGGPGQSVSGSVGGSNPNRSIGHVRSGSNVEENILVTLMPEKEGVFMFQHHNYEVSSIRRGSKVVRRYSDFVWLLDCLHKRYPFRVLPLLPPKRVAFNGNHLSNDGAFIEKRRRGLARFLNALVRHPVLGQEQLVIMFLTVPTELSVWRKQATISVQDEFTGRTLPPGLEDSLPPTLEELFARTRVGVRRSAELYISTCTIMDRLIKRSEGVAADHARMAVSLISLTETSADTYATDHNDVPLLNDGLQAMGRHLRTAQTLMEDEAKAWEEGVLEDLKRQRDALVSLRDMFDRRDRLDKDNIPFLQRRIETNEAKLQALNAKPEGMVKPGEKERVVEAIIKDKESIVTQHNRSVFVKECIRDELRFFQNTQYNVSRLTQDWAQERVKYSEMLADNWRRLLDDLEGMPLGD

Annotated regions:
phrase: ENILVTLMPEKEGVFMFQHHNYEVSSIRRGSKVVRRYSDFVWLLDCLHKRYPFRVLPLLPPKRVAFNGNHLSNDGAFIEKRRRGLARFLNALVRHPVLGQEQLVIMFLTV
type: DOMAIN
name: SNX8/Mvp1_PX
description: SNX8/Mvp1, PX domain

phrase: RGSKVVRRYSDFVWLLDCLHKRYPFRVLPLLPPKRVAFNGNHLSNDGAFIEKRRRGLARFLNALVRHPVLGQEQLVIMFLT
type: DOMAIN
name: PX_dom
description: Phox homology

phrase: EENILVTLMPEKEGVFMFQHHNYEVSSIRRGSKVVRRYSDFVWLLDCLHKRYPFRVLPLLPPKRVAFNGNHLSNDGAFIEKRRRGLARFLNALVRHPVLGQEQLVIMFLTVPTE
type: DOMAIN
name: PX_dom
description: Phox homology

phrase: ENILVTLMPEKEGVFMFQHHNYEVSSIRRGSKVVRRYSDFVWLLDCLHKRYPFRVLPLLPPKRVAFNGNHLSNDGAFIEKRRRGLARFLNALVRHPVLGQEQLVIMFLTV
type: DOMAIN
name: PX_dom
description: Phox homology

phrase: TISVQDEFTGRTLPPGLEDSLPPTLEELFARTRVGVRRSAELYISTCTIMDRLIKRSEGVAADHARMAVSLISLTETSADTYATDHNDVPLLNDGLQAMGRHLRTAQTLMEDEAKAWEEGVLEDLKRQRDALVSLRDMFDRRDRLDKDNIPFLQRRIETNEAKLQALNAKPEGMVKPGEKERVVEAIIKDKESIVTQHNRSVFVKECIRDELRFFQNTQYNVSRLTQDWAQERVKYSEMLADNWRRLLDDLEGMPLG
type: DOMAIN
name: Snx8_BAR_dom
description: Sorting nexin 8/Mvp1, BAR domain
Protein sequence:
MSTRKSPFFKKAEISLASPKAIEIWTERYFPNGQPINEVTSSETVNYKTLKPEPHGLFCQTIFGPVVDFTCACGKKATKLVKNKKFRGYCPKCGVERTSSRVRRYRLGLIKLKQPVAHSLYVSHRPSPLRLCLGWSTKRLQAVLKAVEFCYLPLIFTTFQSERECFSFFPKSFLLLRSQLTQKNEVFLEPRSSGFNENLSSSFFFKEKKRSKRKTGKVFPLRTSPRLFHKKHQKNRPRLVFNHGVIEARLYGIAYDATWPKVEEFQEFLFYLWEQSFFYESSIPYYAFAKGVKSYKEEIPKREQSYALQTGGLALQQILSHHDSSRFEYDLIYLSKKVSMILEILKENMASLNLDYEDDQKEYKKLLSKVKKLDLLLLKWKRQRELYRDFEVGKTQPAWMILNNLPVLPPGLRPITSIGGLVVASDINSFYRKIIIRNKRMSPRNNLGIFDTTLGGSWLSWCYNLRQVQEAVDELLRTGSVDAGRPLKSLLDGLKGKKGRFRQHLLGKRVDYSGRSVIVVGPKLKLHQCGLPKEMAVELFQPFIIQQLRLQGIVFTVTAAKVLIADRKPIVWSVLGEILKRHPVLLNRAPTLHRLGIQAFLPRLVEGKAILLHPLVCPAFNADFDGDQMAVHVPLSAKTRAEALSLLWSRNQLLAPSSGQPQHLPTQDMVLGFYYLTCSLEKTLKRVDSLVSSRKLFFQSSFFLKKKNEETLKNSIPQNLYFSEFSQVKTAYDIGNLTLHTPIWVKWTSCVQTFVPERHSRLKETLLETRLTFSGQRQTLFIDTCQFFSPSFFFGKKVRFIRTTPGRIFMHWCFFEANAEMSSTPTSKEKKSLEKK

Annotated regions:
phrase: SVLGEILKRHPVLLNRAPTLHRLGIQAFLPRLVEGKAILLHPLVCPAFNADFDGDQMAVHVPLSAKTRAEALSL
type: DOMAIN
name: RNA_pol_asu
description: RNA polymerase, alpha subunit

phrase: GKRVDYSGRSVIVVGPKLKLHQCGLPKEMAVELFQPFIIQQLRL
type: DOMAIN
name: RNA_pol_asu
description: RNA polymerase, alpha subunit

phrase: AWMILNNLPVLPPGLRPITSIGGLVVASDINSFYRKIIIRNKRMSPRNNLGIFDTTLGGSWLSWCYNLRQVQEAVDELLRTGSVDAGRPLKSLLDGLKGKKGRFRQHLLGKRVDYSGRSVIVVGPKLKLHQCGLPKEMAVELFQPFIIQQLRLQGIVFTVTAAKVLIADRKPIVWSVLGEILKRHPVLLNRAPTLHRLGIQAFLPRLVEGKAILLHPLVCPAFNADFDGDQMAVHVPLSAKTRAEALSLLWSRNQLLAPSSGQPQHLPTQDMVLGFYYL
type: DOMAIN
name: RNA_pol_N
description: RNA polymerase, N-terminal

phrase: NEVTSSETVNYKTLKPEPHGLFCQTIFGPVVDFTCACGKKATKLVKNKKFRGYCPKCGVERTSSRVRRYRLGLIKLKQPVAHSLYVSHRPSPLRLCLGWSTKRLQAVLKAVEFCYLPLIFTTFQSERECFSFFPKSFLLLRSQLTQKNEVFLEPRSSGFNENLSSSFFFKEKKRSKRKTGKVFPLRTSPRLFHKKHQKNRPRLVFNHGVIEARLYGIAYDATWPKVEEFQEFLFYLWEQSFFYESSIPYYAFAKGVKSYKEEIPKREQSYALQTGGLALQQILSHHDSSRFEYDLIYLSKKVSMILEILKENMASLNLDYEDDQKEYKKLLSKVKKLDLLLLKWKRQRELYRDFEVGKTQPAWMILNNLPVLPPGLRPITSIGGLVVASDINSFYRKIIIRNKRMSPRNNLGIFDTTLGGSWLSWCYNLRQVQEAVDELLRTGSVDAGRPLKSLLDGLKGKKGRFRQH
type: DOMAIN
name: RNA_pol_Rpb1_1
description: RNA polymerase Rpb1, domain 1
Protein sequence:
MSIRIVPKEQLGAQREKSTTAETIPPLLFANLKSLYSRRAERLRKLATDNPLGDYLNFAAQLAEAQHHALHDNPLTLDLTEELQQGAASGKPPLDLSVFPRSEHWHKLLVSLIAELRPQAPEHILAVLDNLEKASSHELELLADALLNQDFGKIGSEKAPFIWAALSLYWAQMAGLIPGKARAEYGEHRQFCPVCGSIPVSSVVHIGTVSGLRYLHCNLCESEWHVVRIKCSNCEQTRDLNYWSLDSELAAVKAESCGDCGTYLKILYQEKDPQVEAVADDLATLVLDAKMEDEGFARSSINPFLFPGS

Annotated regions:
phrase: FCPVCGSIPVSSVVHIGTVSGLRYLHCNLCESEWHVV
type: DOMAIN
name: FdhE_central
description: FdhE, central domain

phrase: IPPLLFANLKSLYSRRAERLRKLATDNPLGDYLNFAAQLAEAQHHALHDNPLTLDLTEELQQGAASGKPPLDLSVFPRSEHWHKLLVSLIAELRPQAPEHILAVLDNLEKASSHELELLADALLNQDFGKIGSEKAPFIWAALSLYWAQMAGLIPGKARAEYG
type: DOMAIN
name: FdhE_N
description: FdhE, N-terminal domain

phrase: IKCSNCEQTRDLNYWSLDSELAAVKAESCGDCGTYLKILYQEKDPQVEAVADDLATLVLDAKMEDEGFARSSINPF
type: DOMAIN
name: FdhE_C
description: FdhE, C-terminal domain
Protein sequence:
MIRLYRPQRPPLRAPLRATPSLSLRWRVMLLAMSMVAMVVVLMAFAVYAVISAALYSDIDNQLQSRAQLLIASGSLAADPGKAIEGTAYSDVNAMLVNPGHAIYTAQQPGQTLPVGSPEKAVIHGELFMSRRTAGDQRILAVHLQNGTSLLISKSLKPTEAVMNKLRWVLLIVGGVGVAVAAVAGGMVTRAGLRPVARLTEAAERVARTDDLRPIPVFGSDELARLTESFNLMLRALAESRERQARLVTDAGHELRTPLTSLRTNVELLMASMEPGAPRLPEQEMVELRADVLAQIEELSTLVGDLVDLTRDDAGQVVHEPVDMSDVIDRSLERVRRRRNDIHFDVDVTPWQMYGDAAGLSRAVLNLLDNAAKWSPPGGHVGVTMRQLDPSHVELVVSDHGPGIPPQERRLVFERFYRSTSARAMPGSGLGLAIVKKVVLNHGGMLRVEDTVPGGQPPGTSFYVLLPGRSLPPAGHSTPAGESETDQAEAATDPAVPVAGDTANSRESANVISVDSQSARAR

Annotated regions:
phrase: RAGLRPVARLTEAAERVARTDDLRPIPVFGSDELARLTESFNLMLRALAESR
type: DOMAIN
name: HAMP_dom
description: HAMP domain

phrase: RAGLRPVARLTEAAERVARTDDLRPIPVFGSDELARLTESFNLMLRALAESR
type: DOMAIN
name: HAMP_dom
description: HAMP domain

phrase: ERQARLVTDAGHELRTPLTSLRTNVELLMASMEPGAPRLPEQEMVELRADVLAQIEELSTLVGDLVDLT
type: DOMAIN
name: HisK_dim/P_dom
description: Signal transduction histidine kinase, dimerisation/phosphoacceptor domain

phrase: RQARLVTDAGHELRTPLTSLRTNVELLMASMEPGAPRLPEQEMVELRADVLAQIEELSTLVGDLVDLTRDDA
type: DOMAIN
name: HisK_dim/P_dom
description: Signal transduction histidine kinase, dimerisation/phosphoacceptor domain

phrase: DAGHELRTPLTSLRTNVELLMASMEPGAPRLPEQEMVELRADVLAQIEELSTLVGDLVDLTRDDAGQVVHEPVDMSDVIDRSLERVRRRRNDIHFDVDVTPWQMYGDAAGLSRAVLNLLDNAAKWSPPGGHVGVTMRQLDPSHVELVVSDHGPGIPPQERRLVFERFYRSTSARAMPGSGLGLAIVKKVVLNHGGMLRVEDTVPGGQPPGTSFYVLLPGR
type: DOMAIN
name: His_kinase_dom
description: Histidine kinase domain

phrase: VELVVSDHGPGIPP
type: DOMAIN
name: Sig_transdc_His_kin-like_C
description: Signal transduction histidine kinase-related protein, C-terminal

phrase: LVFERFYRST
type: DOMAIN
name: Sig_transdc_His_kin-like_C
description: Signal transduction histidine kinase-related protein, C-terminal

phrase: PGSGLGLAIVKKVVLNHG
type: DOMAIN
name: Sig_transdc_His_kin-like_C
description: Signal transduction histidine kinase-related protein, C-terminal

phrase: GGQPPGTSFYVLL
type: DOMAIN
name: Sig_transdc_His_kin-like_C
description: Signal transduction histidine kinase-related protein, C-terminal

phrase: QARLVTDAGHELRTPLTSLRTNVELLMASMEPGAPRLPEQEMVELRADVLAQIEELSTLVGDLVDLTRDDA
type: DOMAIN
name: HisK_dim/P_dom
description: Signal transduction histidine kinase, dimerisation/phosphoacceptor domain

phrase: GDAAGLSRAVLNLLDNAAKWSPPGGHVGVTMRQLDPSHVELVVSDHGPGIPPQERRLVFERFYRSTSARAMPGSGLGLAIVKKVVLNHGGMLRVEDTVPGGQPPGTSFYVLL
type: DOMAIN
name: HATPase_dom
description: Histidine kinase/HSP90-like ATPase domain

phrase: GDAAGLSRAVLNLLDNAAKWSPPGGHVGVTMRQLDPSHVELVVSDHGPGIPPQERRLVFERFYRSTSARAMPGSGLGLAIVKKVVLNHGGMLRVEDTVPGGQPPGTSFYVLLPGR
type: DOMAIN
name: HATPase_dom
description: Histidine kinase/HSP90-like ATPase domain

phrase: VTRAGLRPVARLTEAAERVARTDDLRPIPVFGSDELARLTESFNLMLRAL
type: DOMAIN
name: HAMP_dom
description: HAMP domain
Protein sequence:
MKNEKKKSGIEPKVFFPPLIIVGILCWLTVRDLDAANVVINAVFSYVTNVWGWAFEWYMIVMLFGWFWLVFGPYAKKRLGDEKPEFSTASWIFMMFASCTSAAVLFWGSIEIYYYISTPPFGLEPNSTGAKEIGLAYSLFHWGPLPWATYSFLSVAFAYFFFVRKMDVIRPSSTLVPLVGEKHAKGLFGTIVDNFYLVALIFAMGTSLGLATPLVTECMQWLFGIPHTLQLDAIIITCWIILNAICVACGLQKGVRIASDMRSYLSFLMLGWVFIVSGASFIMNYFTDSVGMLLMHLPRMLFYTDAIGKGGFPQGWTVFYWAWWVIYAIQMSIFLARISRGRTVRELCFGMVMGLTASTWILWTVLGSNTLLLMDKNILNIPQLIEQHGVARAIIETWAALPLSTATMWGFFILCFIATVTLINACSYTLAMSTCREVRDGEEPPLLVRIGWSVLVGIIGIVLLALGGLKPIQTAIIAGGCPLFFVNIMVTLSFIKDAKVHWKDK

Annotated regions:
phrase: GWTVFYWAW
type: CONSERVED_SITE
name: BCCT_CS
description: BCCT transporter, conserved site
Protein sequence:
MSDMAERLALHEFTENAYLNYSMYVIMDRALPFIGDGLKPVQRRIVYAMSELGLNASAKFKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRYTESRLSKYSELLLSELGQGTADWVPNFDGTLQEPKMLPARLPNILLNGTTGIAVGMATDIPPHNLREVAQAAIALIDQPKTTLDQLLDIVQGPDYPTEAEIITSRAEIRKIYENGRGSVRMRAVWKKEDGAVVISALPHQVSGARVLEQIAAQMRNKKLPMVDDLRDESDHENPTRLVIVPRSNRVDMDQVMNHLFATTDLEKSYRINLNMIGLDGRPAVKNLLEILSEWLVFRRDTVRRRLNYRLEKVLKRLHILEGLLVAFLNIDEVIEIIRNEDEPKPALMSRFGLTETQAEAILELKLRHLAKLEEMKIRGEQSELEKERDQLQGILASERKMNNLLKKELQADAQAYGDDRRSPLQEREEAKAMSEHDMLPSEPVTIVLSQMGWVRSAKGHDIDAPGLNYKAGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLPPGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAITQAGRMLMFPVSDLPQLSKGKGNKIINIPSAEAARGEDGLAQLYVLPPQSTLTIHVGKRKIKLRPEELQKVTGERGRRGTLMRGLQRIDRVEIDSPRRASSGDSEE

Annotated regions:
phrase: LALHEFTENAYLNYSMYVIMDRALPFIGDGLKPVQRRIVYAMSELGLNASAKFKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRYTESRLSKYSELLLSELGQGTADWVPNFDGTLQEPKMLPARLPNILLNGTTGIAVGMATDIPPHNLREVAQAAIALIDQPKTTLDQLLDIVQGPDYPTEAEIITSRAEIRKIYENGRGSVRMRAVWKKEDGAVVISALPHQVSGARVLEQIAAQMRNKKLPMVDDLRDESDHENPTRLVIVPRSNRVDMDQVMNHLFATTDLEKSYRINLNMIGLDGRPAVKNLLEILSEWLVFRRDTVRRRLNYRLEKVLKRLHILEGLLVAFLNIDEVIEIIRNEDEPKPALMSRFGLTETQAEAILELKLRHLAKLEEMKIRGEQSELEKERDQLQGILASERKM
type: DOMAIN
name: Topo_IIA_dom_A
description: DNA topoisomerase, type IIA, domain A

phrase: RALPFIGDGLKPVQRRIVYAMSELGLNASAKFKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRYTESRLSKYSELLLSELGQGTADWVPNFDGTLQEPKMLPARLPNILLNGTTGIAVGMATDIPPHNLREVAQAAIALIDQPKTTLDQLLDIVQGPDYPTEAEIITSRAEIRKIYENGRGSVRMRAVWKKEDGAVVISALPHQVSGARVLEQIAAQMRNKKLPMVDDLRDESDHENPTRLVIVPRSNRVDMDQVMNHLFATTDLEKSYRINLNMIGLDGRPAVKNLLEILSEWLVFRRDTVRRRLNYRLEKVLKRLHILEGLLVAFLNIDEVIEIIRNEDEPKPALMSRFGLTETQAEAILELKLRHLAKLEEMKIRGEQSELEKERDQLQGILASERKMNNLLKKEL
type: DOMAIN
name: Topo_IIA_dom_A
description: DNA topoisomerase, type IIA, domain A

phrase: MDRALPFIGDGLKPVQRRIVYAMSELGLNASAKFKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRYTESRLSKYSELLLSELGQGTADWVPNFDGTLQEPKMLPARLPNILLNGTTGIAVGMATDIPPHNLREVAQAAIALIDQPKTTLDQLLDIVQGPDYPTEAEIITSRAEIRKIYENGRGSVRMRAVWKKEDGAVVISALPHQVSGARVLEQIAAQMRNKKLPMVDDLRDESDHENPTRLVIVPRSNRVDMDQVMNHLFATTDLEKSYRINLNMIGLDGRPAVKNLLEILSEWLVFRRDTVRRRLNYRLEKVLKRLHILEGLLVAFLNIDEVIEIIRNEDEPKPALMSRFGLTETQAEAILELKLRHLAKLEEMKIRGEQSELEKERDQLQGILASERKMNNLLKKELQ
type: DOMAIN
name: Topo_IIA_dom_A
description: DNA topoisomerase, type IIA, domain A

phrase: KLLMASDAGYGFVCTFNDLVARNRAGKALITLPENAHV
type: REPEAT
name: GyrA/parC_rep
description: DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat

phrase: DMLLAITQAGRMLMFPVSDLPQLSKGKGNKIINI
type: REPEAT
name: GyrA/parC_rep
description: DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat
Protein sequence:
MDFTQPKPATALCGVVSADGKIAYPPGVKEITDKITTDEMIKRLKMVVKTFMDMDQDSEDEKQQYLPLALHLASEFFLRNPNKDVRLLVACCLADIFRIYAPEAPYTSHDKLKDIFLFITRQLKGLEDTKSPQFNRYFYLLENLAWVKSYNICFELEDCNEIFIQLFRTLFSVINNSHNTKVQMHMLDLMSSIIMEGDGVTQELLDSILINLIPAHKNLNKQSFDLAKVLLKRTVQTIEACIANFFNQVLVLGRSSVSDLSEHVFDLIQELFAIDPQLLLSVMPQLEFKLKSNDGEERLAVVRLLAKLFGSKDSDLATQNRPLWQCFLGRFNDIHVPVRLESVKFASHCLMNHPDLAKDLTEYLKVRSHDPEEAIRHDVIVTIITAAKRDLALVNDQLLGFVRERTLDKRWRVRKEAMMGLAQLYKKYCLHGEAGKEAAEKVSWIKDKLLHIYYQNSIDDKLLVEKIFAQYLVPHNLETEERMKCLYYLYASLDPNAVKALNEMWKCQNMLRSHVRELLDLHKQPTSEANCSAMFGKLMTIAKNLPDPGKAQDFVKKFNQVLGDDEKLRSQLELLISPTCSCKQADVCVREIARKLANPKQPTNPFLEMVKFLLERIAPVHIDSEAISALVKLMNKSIEGTADDEEEGVSPDSAIRSGLELLKVLSFTHPTSFHSAETYESLLQCLRMEDDKVAEAAIQIFRNTGHKIETDLPQIRSTLIPILHQKAKRGTPHQAKQAVHCIHAIFSNKEVQLAQIFEPLSRSLNADVPEQLITPLVSLGHISMLAPDQFASPMKSVVANFIVKDLLMNDRSTGEKNGKLWSPDEEVSPEVLAKVYLLRLLVRWLLGMKNNQSKSANSTLRLLSAMLVSEGDLTEQKRISKSDMSRLRLAAGSAIMKLAQEPCYHEIITPEQFQLCALVINDECYQVRQIFAQKLHKALVKLLLPLEYMAIFALCAKDPVKERRAHARQCLLKNISIRREYIKQNPMATEKLLSLLPEYVVPYMIHLLAHDPDFTRSQDVDQLRDIKECLWFMLEVLMTKNENNSHAFMKKMAENIKLTRDAQSPDESKTNEKLYTVCDVALCVINSKSALCNADSPKDPVLPMKFFTQPEKDFCNDKSYISEETRVLLLTGKPKPTGVLGTVNKPLSATGRKPYVRSAGTETGSNINANSELSPSAGSRSREQSSEASETGVSENEENPVRIISVTPVKNIDTVKNKEINSDQSTQGNISSDRGKKRIVTAAGAENIQKPDEKVDESGPPAPSKPRRGRRPKSESQGNATKNDDLNKPVSKGRKRAAGSQESLEAGNAKAPKLQDGAKKAVPAERQIDLQR

Annotated regions:
Protein sequence:
MELYPFIKKQDSQVYKALQGEEKRQAEGLELIPSENYVSRAVREANFSILTNKYSEGYPGRRYYGGQEYTDAVETLAIERAKKLFGAKYANVQTLGGANANIAMYFALLEPGDTVLGMDLSHGGHLTHGHPVTYLTKIFRFVRYKMKNPDTGEIDYERMCEVALKEKPRIVLAGFSAYPRELDYAKFVDIAREVGAYAVMDIAHIAGLIAGRAVKNPFDYGFDIMTSTTHKTLRGPRGGLILTRDDEALAKKIDKSVFPGLQGGPHMNNIAAKAIAFGEALKPSFKKYAKQILKNAKAMEKVFKAHDVRLLTGGTSNHLLLADVFGSMDIPGKEAEKVLDEVGITLNKNSIADDVRGPMDPSGIRFGTPAITTRGLKEKECAKVAEWMIEALKNRNDNKKLETIKEEVEKLCKKFPIPSRFI

Annotated regions:
phrase: DIMTSTTHKTLRGPRG
type: BINDING_SITE
name: Ser_HO-MeTrfase_PLP_BS
description: Serine hydroxymethyltransferase, pyridoxal phosphate binding site

phrase: IKKQDSQVYKALQGEEKRQAEGLELIPSENYVSRAVREANFSILTNKYSEGYPGRRYYGGQEYTDAVETLAIERAKKLFGAKYANVQTLGGANANIAMYFALLEPGDTVLGMDLSHGGHLTHGHPVTYLTKIFRFVRYKMKNPDTGEIDYERMCEVALKEKPRIVLAGFSAYPRELDYAKFVDIAREVGAYAVMDIAHIAGLIAGRAVKNPFDYGFDIMTSTTHKTLRGPRGGLILTRDDEALAKKIDKSVFPGLQGGPHMNNIAAKAIAFGEALKPSFKKYAKQILKNAKAMEKVFKAHDVRLLTGGTSNHLLLADVFGSMDIPGKEAEKVLDEVGITLNKNSIADDVRGPMDPSGIRFGTPAITTRGLKEKECAKVAEW
type: DOMAIN
name: SHMT-like_dom
description: Serine hydroxymethyltransferase-like domain
Protein sequence:
MALNLRKNHQILKIINDALIDLPAPSNISTWWNFGSLLGLCLITQIITGLLLAMHYTADTNLAFSSVAHMCRDVQFGWLIRNLHANGASFFFICIYLHIGRGIYYGSYLNKETWNIGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIVGLTLVHLTFLHETGSNNPLGIPSDCDKIPFHPYYTIKDALGFVLMLSLLVSLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILVLFLMPLLHTSKLRSMTFRPLSQILFWTLVANVLILTWVGSQPVEHPFIIIGQLASFTYFAIILILFPLAAALENKLLKL

Annotated regions:
phrase: PANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILVLFLMPLLHTSKLRSMTFRPLSQILFWTLVANVLILTWVGSQPVEHPFIIIGQLASFTY
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: GIPSDCDKIPFHPYYTIKDALGFVLMLSLLVSLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILVLFLMPLLHTSKLRSMTFRPLSQILFWTLVANVLILTWVGSQPVEHPFIIIGQLASFTYFAIILILFPLAAALENKLLK
type: DOMAIN
name: Cyt_b/b6_C
description: Cytochrome b/b6, C-terminal

phrase: ILKIINDALIDLPAPSNISTWWNFGSLLGLCLITQIITGLLLAMHYTADTNLAFSSVAHMCRDVQFGWLIRNLHANGASFFFICIYLHIGRGIYYGSYLNKETWNIGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIVGLTLVHLTFLHETGS
type: DOMAIN
name: Cytochrome_b_N_euk/bac
description: Cytochrome b/b6, N-terminal domain, eukaryotic/bacterial

phrase: NPLGIPSDCDKIPFHPYYTIKDALGFVLMLSLLVSLALFSPNLLGDPENFTPANPLVTPPHIKPEWYFLFAYAILRSIPNKLGGVLALAASILVLFLMPLLHTSKLRSMTFRPLSQILFWTLVANVLILTWVGSQPVEHPFIIIGQL
type: DOMAIN
name: Cytochrome_b_C_euk/bac
description: Cytochrome b/b6, C-terminal domain, eukaryotic/bacterial

phrase: MALNLRKNHQILKIINDALIDLPAPSNISTWWNFGSLLGLCLITQIITGLLLAMHYTADTNLAFSSVAHMCRDVQFGWLIRNLHANGASFFFICIYLHIGRGIYYGSYLNKETWNIGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIVGLTLVHLTFLHETGSNNP
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain

phrase: IDLPAPSNISTWWNFGSLLGLCLITQIITGLLLAMHYTADTNLAFSSVAHMCRDVQFGWLIRNLHANGASFFFICIYLHIGRGIYYGSYLNKETWNIGVILLLTLMATAFVGYVLPWGQMSFWGATVITNLFSAIPYIGQTLVEWAWGGFSVDNPTLTRFFALHFLLPFVIVGLTLVHLTFLHET
type: DOMAIN
name: Cyt_b/b6_N
description: Cytochrome b/b6, N-terminal domain
Protein sequence:
MISRNSILLRRLYPTTIIRTLATDATESTSVKTKRRRTIFTDELNKGPSFDDFVSGKAKDMLEDPLETARKDPNAKLPSWLKVPIPKGKSFHNVKKDVRELKLATVCEEAKCPNIGECWGGKKSEATATIMLLGDTCTRGCRFCSVKTNRKPAAPDPMEPENTAEAISRWGLGYVVLTTVDRDDLVDGGARHLAETVQKIKQKAPQILVEVLGGDFRGDLSMVEILADSGLDVYAHNLETVEALTPHIRDRRATYRQSLAVLERAKQTNSSLITKTSLMLGFGETDDQVLQTLRDLREIGCDVVTFGQYMRPTKRHMKVVEYIKPEKFDYWRDTALDMGFLYVASGPLVRSSYKAGEAFIENVLKKRKHNVGETPRLAQEIKPSIY

Annotated regions:
phrase: KKSEATATIMLLGDTCTRGCRFCSVKTNRKPAAPDPMEPENTAEAISRWGLGYVVLTTVDRDDLVDGGARHLAETVQKIKQKAPQILVEVLGGDFRGDLSMVEILADSGLDVYAHNLETVEALTPHIRDRRATYRQSLAVLERAKQTNSSLITKTSLMLGFGETDDQVLQTLRDLREIGCDVVTFGQYMRPTKRHMKVVEYIKPEKFDYWRDTALDMGF
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VKTKRRRTIFTDELNKGPSFDDFVSGKAKDMLEDPLETARKDPNAKLPSWLKVPIPKGKSFHNVKKDVRELKLATVCEEAK
type: DOMAIN
name: LIAS_N
description: Lipoyl synthase, N-terminal

phrase: LGDTCTRGCRFCSVKTNRKPAAPDPMEPENTAEAISRWGLGYVVLTTVDRDDLVDGGARHLAETVQKIKQKAPQILVEVLGGDFRGDLSMVEILADSGLDVYAHNLETVEALTPHIRDRRATYRQSLAVLERAKQTNSSLITKTSLMLGFGETDDQVLQTLRD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TATIMLLGDTCTRGCRFCSVKTNRKPAAPDPMEPENTAEAISRWGLGYVVLTTVDRDDLVDGGARHLAETVQKIKQKAPQILVEVLGGDFRGDLSMVEILADSGLDVYAHNLETVEALTPHIRDRRATYRQSLAVLERAKQTNSSLITKTSLMLGFGETDDQVLQTLRDLREIGCDVVTFGQYMRPTKRHMKVVEYIKPEKFDYWRDTA
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain
Protein sequence:
MATGKEILNDAKQKMAKSGYALQRTLADIRAGQANASLLNSVKVEYYGAPTPLNQVASITIPEARQLLITPYDESVLEEIEKAIYASNLGLTPQNDGSSIRLIIPQLTEDRRKELVKDVKAELEKAKVAVRNVRREAMDDLKKGNKNGDFNDDEFHDLEKKVQNETDAGIKNLEDIANAKEKELMEG

Annotated regions:
phrase: LQRTLADIRAGQANASLLNSVKVEYYGAPTPLNQVASITIPEARQLLITPYDESVLEEIEKAIYASNLGLTPQNDGSSIRLIIPQLTEDRRKELVKDVKAELEKAKVAVRNVRREAMDDLKKGNKNGDFNDDEFHDLEKKVQNETDAGIKNLEDIANAKEKEL
type: DOMAIN
name: Ribosome_recyc_fac_dom
description: Ribosome recycling factor domain
Protein sequence:
MTTNKYIATPSRTKDILGKYHFTFKKSLGQNFLVDVSVLQNIIRHAGITKDTAAIEIGPGIGALTEQLAIHADQVVAFEIDQRLLPILQDTLGEYSNVSVIHQDILKADVTKVIDEHFKEGQEVHVVANLPYYITTPILMKLIRDRLPVTSLTVMIQKEVADRMSGEPNSKSYGSLSLAVQYYSEAKVVMNVPKQVFMPQPNVDSSILQLTMRKQPPVEVTDEDFFFEIIQASFAQRRKTLKNNLTRFFKGVHDKEKIDHILQEAGVEGIRRGESLTMEEFAQVANTFYQYQSK

Annotated regions:
phrase: VLQNIIRHAGITKDTAAIEIGPGIGALTEQLAIHADQVVAFEIDQRLLPILQDTLGEYSNVSVIHQDILKADVTKVIDEHFKEGQEVHVVANLPYYITTPILMKLIRDRLPVTSLTVMIQKEVADRMSGEPNSKSYGSLSLAVQYYSEAKVVMNVPKQVFMPQPNVDSSILQLTMR
type: DOMAIN
name: rRNA_Ade_methylase_Trfase_N
description: Ribosomal RNA adenine methylase transferase, N-terminal

phrase: AIEIGPGIGALTEQLAIHADQVVAFEI
type: CONSERVED_SITE
name: rRNA_Ade_Mease_Trfase_CS
description: Ribosomal RNA adenine methylase transferase, conserved site
Protein sequence:
MSESVSKSSQPLASKQEKDGTEKRGRGRPRKQPSVSPGTALVGSQKEPSEVPTPKRPRGRPKGSKNKGTAKTRKVTTTPGRKPRGRPKKLEKEEEEGISQESSEEEQ

Annotated regions:
phrase: TPGRKPRGRPK
type: CONSERVED_SITE
name: HMGI/Y_DNA-bd_CS
description: HMG-I/HMG-Y, DNA-binding, conserved site

phrase: KRGRGRPRKQ
type: CONSERVED_SITE
name: AT_hook_DNA-bd_motif
description: AT hook, DNA-binding motif

phrase: TPKRPRGRPKG
type: CONSERVED_SITE
name: AT_hook_DNA-bd_motif
description: AT hook, DNA-binding motif

phrase: PGRKPRGRPK
type: CONSERVED_SITE
name: AT_hook_DNA-bd_motif
description: AT hook, DNA-binding motif

phrase: KRPRGRPKGSKN
type: CONSERVED_SITE
name: AT_hook_DNA-bd_motif
description: AT hook, DNA-binding motif

phrase: KPRGRPK
type: CONSERVED_SITE
name: AT_hook_DNA-bd_motif
description: AT hook, DNA-binding motif

phrase: KRGRGRPRKQ
type: CONSERVED_SITE
name: AT_hook_DNA-bd_motif
description: AT hook, DNA-binding motif

phrase: RKPRGRPKKLEK
type: CONSERVED_SITE
name: AT_hook_DNA-bd_motif
description: AT hook, DNA-binding motif

phrase: KRPRGRPKGSKN
type: CONSERVED_SITE
name: AT_hook_DNA-bd_motif
description: AT hook, DNA-binding motif

phrase: KRGRGRPRKQPS
type: CONSERVED_SITE
name: AT_hook_DNA-bd_motif
description: AT hook, DNA-binding motif
Protein sequence:
MQKGNIGVTTENIFPIIKKFLYSDHEIFLRELVSNAVDATQKLNTLASIGEFKGELGDLTIHVELGKDTITISDRGIGLTAEEIEKYINQIAFSGANDFLEKYKDDANAIIGHFGLGFYSAFMVAKKVEIITKSYRDEAQAIKWTCDGSPEFTIEEVDKADRGSDIILYIDDDCKEFLEEARVSELLKKYCSFLPVPIAFGKKKEWKDGKQIETTEDNIINDTTPLWTRKPSELSDEDYKSFYTKLYPMSDEPLFWIHLNVDYPFHLTGILYFPKVKSNIELNKNKIQLYCNQVYVTDSVEGIVPDFLTLLHGVIDSPDIPLNVSRSYLQSDSNVKKISTYITKKVSDRLQSIFKNDRKQFEEKWNDLKIFINYGMLTQEDFYEKAQKFALFTDTDNKHYTFEEYQTLIKDNQTDKDGNLIYLYANNKDEQFSYIEAATNKGYNVLLMDGQLDVAMVSMLEQKFEKSRFTRVDSDVIDNLIIKEDKKNETLEGEKQEAITTAFKSQLPKMDKVEFNVMTQALGDNSAPVMITQSEYMRRMKEMANIQAGMSFYGEMPDMFNLVLNSDHKLIKQVLDEEEAACHPEVAPIQTEMNSVSKRRNELKDSQKDKKEEDIPTAEKDELNELDKKWDELKNKKEGIFAGYASNNKVIRQLIDLALLQNNMLKGEALNNFVKRSIELI

Annotated regions:
phrase: YSDHEIFLR
type: CONSERVED_SITE
name: Heat_shock_protein_90_CS
description: Heat shock protein Hsp90, conserved site

phrase: SDHEIFLRELVSNAVDATQKLN
type: DOMAIN
name: Hsp90_N
description: Heat shock protein Hsp90, N-terminal

phrase: TITISDRGIGLTAEEIE
type: DOMAIN
name: Hsp90_N
description: Heat shock protein Hsp90, N-terminal

phrase: YINQIAFSGANDFLEKY
type: DOMAIN
name: Hsp90_N
description: Heat shock protein Hsp90, N-terminal

phrase: IGHFGLGFYSAFMVAKKVEIIT
type: DOMAIN
name: Hsp90_N
description: Heat shock protein Hsp90, N-terminal

phrase: RGSDIILYIDDDCKEFL
type: DOMAIN
name: Hsp90_N
description: Heat shock protein Hsp90, N-terminal

phrase: EARVSELLKKYCSFLPVP
type: DOMAIN
name: Hsp90_N
description: Heat shock protein Hsp90, N-terminal

phrase: ENIFPIIKKFLYSDHEIFLRELVSNAVDATQKLNTLASIGEFKGELGDLTIHVELGKDTITISDRGIGLTAEEIEKYINQIAFSGANDFLEKYKDDANAIIGHFGLGFYSAFMVAKKVEIITKSYRDEAQAIKWTCDGSPEFTIEEVDKADRGSDIILYIDDDCKEFLEEARVSELLKKYCSF
type: DOMAIN
name: Hsp90_N
description: Heat shock protein Hsp90, N-terminal