nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MDKLHLEIVTPQGQVFSDDVSSVVLPGSEGEFGVLPNHASLISLLKAGIIDIEDKNKNHDIVAINWGYAKIDEGKVVILADGAVYVAGNSESELANSLDQAKRLIESMSSDTNAFAATIAKMENVVRAR

Annotated regions:
phrase: LHLEIVTPQGQVFSDDVSSVVLPGSEGEFGVLPNHASLISLLKAGIIDIEDKNKNHDIVAINWGYAKIDEGKVVILADG
type: DOMAIN
name: ATP_synth_F1_dsu/esu_N
description: ATP synthase, F1 complex, delta/epsilon subunit, N-terminal
Protein sequence:
MSDSNQYQRSYPISWEQLHRDAKALAWRLLDMDIKWKGIAAVTRGGLVPAAVIARELDIHYVETICISSYTWKDQGQATIIKPLRDSGEGWLIIDDLVDTGKTAQVVRNMLPGAHFATLYAKPEGKPHVDTFITEVGQDTWILFPWDSESRFVEPIAGMTKKK

Annotated regions:
phrase: AKALAWRLLDMDIKWKGIAAVTRGGLVPAAVIARELDIHYVETICISSYTWKDQGQATIIKPLRDSGEGWLIIDDLVDTGKTAQVVRNMLPGAHFATLYAKPEG
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: SWEQLHRDAKALAWRLLDMDIKWKGIAAVTRGGLVPAAVIARELDIHYVETICISSYTWKDQGQATIIKPLRDSGEGWLIIDDLVDTGKTAQVVRNMLPGAHFATLYAKPEGKPHVDTFITEVGQDTWILFPWD
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain
Protein sequence:
MTEVIAYLIEHFQDFDTCPPPEDLGMLLEEAGFDTMEIGNTLMMMEVLLNSSEFSAEPADSGALRVYSKEETDNLPQEVMGLMQYLIEEKAVSCEQREIIIHALMHIPGDEITVDTAKVLTLLLLWANKSELPVLVGDELMSALLLDNKPTMN

Annotated regions:
Protein sequence:
MVKISRQAYAEMFGPTTGDRVRLADTGLVIEVEKDFTIYGEEVKFGGGKVIRDGMGQSQRMAKDCVDTVITNALIVDHWGIVKADIGLKGGRIAAIGKAGNPDIQPGVTIVVGPGTEVIAGEGMIVTAGGIDTHIHFICPQQIEEALMSGVTTMIGGGTGPATGTFATTVTPGPWYMERMLQAIEAYPMNIGLLGKGNASQQAPILEQVEAGAIGLKLHEDWGTTPAAIDTCLSVADATDTQVAIHTDTLNEAGFVEATIAAFKGRTIHTYHTEGAGGGHAPDIIKVCGEANVLPSSTNPTRPYTVNTLDEHLDMLMVCHHLDPAIAEDIAFAESRIRRETIAAEDILHDLGAFSMISSDSQAMGRVGEVIIRTWQTAHKMAAQRGKLPGDPNDARGGHDNFRVKRYIAKYTINPALTHGIAHEVGSIEVGKWADLVLWRPACFGVKPSLILKGGMIAAAAMGDPNASIPTPQPVHYRPMFASAGGALHKSSLTFVSQAALAANVGERYGLAKTLSAVRGTRTVSKRDMVHNDWQPHVTVDPETYQVVADGQLLMCDPATELPMAQRYFLF

Annotated regions:
phrase: MVCHHLDPAIAEDIAF
type: ACTIVE_SITE
name: Urease_AS
description: Urease active site

phrase: TAGGIDTHIHFIC
type: BINDING_SITE
name: Urease_Ni-bd
description: Urease nickel binding site

phrase: KISRQAYAEMFGPTTGDRVRLADTGLVIEVEKDFTIYGEEVKFGGGKVIRDGMGQSQRMAKDCVDTVITNALIVDHWGIVKADIGLKGGRIAAIGKAGNPDIQPGVTIVVGPGTEV
type: DOMAIN
name: Urease_alpha_N_dom
description: Urease alpha-subunit, N-terminal domain

phrase: GGIDTHIHFICPQQIEEALMSGVTTMIGGGTGPATGTFATTVTPGPWYMERMLQAIEAYPMNIGLLGKGNASQQAPILEQVEAGAIGLKLHEDWGTTPAAIDTCLSVADATDTQVAIHTDTLNEAGFVEATIAAFKGRTIHTYHTEGAGGGHAPDIIKVCGEANVLPSSTNPTRPYTVNTLDEHLDMLMVCHHLDPAIAEDIAFAESRIRRETIAAEDILHDLGAFSMISSDSQAMGRVGEVIIRTWQTAHKMAAQRGKLPGDPNDARGGHDNFRVKRYIAKYTINPALTHGIAHEVGSIEVGKWADLVLWRPACFGVKPSLILKGGMIAAAAMGDPNASIPTPQPVHYRPMFASAGGALHKSSLTFVSQAALAANVGERYGLAKTLSAVRGTRTVSKRDMVHNDWQPHVTVDPETYQVVADGQLLMCDPATELPMAQRYFL
type: DOMAIN
name: Urease_asu_c
description: Urease alpha subunit, C-terminal

phrase: IVTAGGIDTHIHFICPQQIEEALMSGVTTMIGGGTGPATGTFATTVTPGPWYMERMLQAIEAYPMNIGLLGKGNASQQAPILEQVEAGAIGLKLHEDWGTTPAAIDTCLSVADATDTQVAIHTDTLNEAGFVEATIAAFKGRTIHTYHTEGAGGGHAPDIIKVCGEANVLPSSTNPTRPYTVNTLDEHLDMLMVCHHLDPAIAEDIAFAESRIRRETIAAEDILHDLGAFSMISSDSQAMGRVGEVIIRTWQTAHKMAAQRGKLPGDPNDARGGHDNFRVKRYIAKYTINPALTHGIAHEVGSIEVGKWADLVLWRPACFGVKPSLILKGGMI
type: DOMAIN
name: Amidohydro-rel
description: Amidohydrolase-related
Protein sequence:
MSRTPLDTVEHAAATPDVELPWAELGLKKDEYERVVEILGRRPTGAELAMYSVMWSEHCSYKSSKVHLRQFGEKAPQSDALLVGIGENAGVVDVGQGYAVTFKVESHNHPSYVEPYQGAATGVGGIVRDIIAMGARPVAVVDPLRFGAADHPDTKRVLPGVVAGIGGYGNCLGLPNIGGEVVFDACYQGNPLVNAGAIGVMRHEDIHLAKASGAGNKVILYGARTGGDGIGGASILASETFDDAKPSKRPAVQVGDPFQEKLLIECTLEAFAEKLVVGIQDLGAAGLSCATSELASNGSGGMRVTLDDVPLRDSTLSPEEILMSESQERMCAVVEPEKVDRFLAICEKWDVIATVIGEVTDGDRLEIYWHGGKIVDVDPRTVAHDGPVYERPYARPEWQDALQADDANKLPRPSSSEELRDQVLKLVASPNQASKSWITSQYDHFVQGNTVLAQPEDSGMIRIDAESGLGVAIATDGNGRYAKLDPYAGAQLALSEAYRNVATTGAKPLAVSDCLNFGSPEDPAVMWQFAEAIRGLADACQQLGTPVTGGNVSLYNQTGEVAIHPTPVVAVLGVIDDVARRTPVAFQEEGQLLYLLGDTREEFGGSAWSQVVHDHLGGLPPQVDLERERLLGEILISASRDGMIDAAHDLSDGGLIQAVVESALLGGKGARLVVPDGLDAFTFLFSESAGRAVVAVPRSEELRFNDMCGARGLPVTRIGVVDGDSVEVQGEFTLPLAELRKAHEETIPALLA

Annotated regions:
phrase: ELGLKKDEYERVVEILGRRPTGAELAMYSVMWSEHCSY
type: DOMAIN
name: PurL_linker
description: Phosphoribosylformylglycinamidine synthase, linker domain

phrase: AGNKVILYGARTGGDGIGGASILASETFDDAKPSKRPAVQVGDPFQEKLLIECTLEAFAEKLVVGIQDLGAAGLSCATSELASNGSGGMRVTLDDVPLRDSTLSPEEILMSESQERMCAVVEPEKVDRFLAICEKWDVIATVIGEVTDGDRLEIY
type: DOMAIN
name: PurM-like_C_dom
description: PurM-like, C-terminal domain

phrase: EEGQLLYLLGDTREEFGGSAWSQVVHDHLGGLPPQVDLERERLLGEILISASRDGMIDAAHDLSDGGLIQAVVESALLGGKGARLVVPDGLDAFTFLFSESAGRAVVAVPRSEELRFNDMCGARGLPVTRIGVVDGDS
type: DOMAIN
name: PurM-like_C_dom
description: PurM-like, C-terminal domain

phrase: GENAGVVDVGQGYAVTFKVESHNHPSYVEPYQGAATGVGGIVRDIIAMGARPVAVVDPLRFGAADHPDTKRVLPGVVAGIGGYGNCLGLPNIGGEVVFDACYQGNPLVNAGAIGV
type: DOMAIN
name: PurM-like_N
description: PurM-like, N-terminal domain

phrase: EDSGMIRIDAESGLGVAIATDGNGRYAKLDPYAGAQLALSEAYRNVATTGAKPLAVSDCLNFGSPEDPAVMWQFAEAIRGLADACQQLGTPVTGGNVSLYNQTGEVAIHPTPVVAVLGV
type: DOMAIN
name: PurM-like_N
description: PurM-like, N-terminal domain
Protein sequence:
MPSHFDTLQLHAGQEKTADAHNPRAVPIYATTSYVFNDSKHGAQLFGLETPGYIYSRIMNPTLDVLEKRLAALEGGIAALATSSGQAAQTLAVTGLAHTGDNIVSTSFLYGGTYNQFKVAFKRLGIEARFVDGDKPEDFEKLFDEKTKALYLESIGNPKYNVPDFEKIVAVAHKHGIPVVVDNTFGAGGFFCQPIKYGADIVTHSATKWIGGHGVTVGGVIIDSGKFPWKDYPEKFPQFSQPSEGYHGLIFNDAFGPAAFIGHVRTELLRDLGPVLSPFAGFLLLQGLETLSLRGERHGSNALKLAQYLESSPYVSWVSYPGLPSHSHHENAKKYLENGFGGVLSFGVKDLPNASEESDPFKASGAQVVDNLKLASNLANVGDSKTLVIAPYFTTHQQLTDEEKLASGVTKDLIRVSVGTEFIDDIIADFEASFATVFNGQKPE

Annotated regions:
phrase: DIVTHSATKWIGGH
type: CONSERVED_SITE
name: Cys_met_metab_PP
description: Cys/Met metabolism enzyme, pyridoxal-phosphate attachment site
Protein sequence:
METQRASLCLGRWSLWLLLLALVVPSASAQALSYREAVLRAVDRLNEQSSEANLYRLLELDQPPKADEDPGTPKPVSFTVKETVCPRPTWRPPELCDFKENGRVKQCVGTVTLDQIKDPLDITCNEIQSVGLLSRLRDFLSDRGRRLGEKIERIGQKIKDLSEFFQS

Annotated regions:
phrase: FTVKETVCPRPTWRPPELCDFK
type: CONSERVED_SITE
name: Cathelicidin_CS
description: Cathelicidin, conserved site

phrase: YREAVLRAVDRLN
type: CONSERVED_SITE
name: Cathelicidin_CS
description: Cathelicidin, conserved site
Protein sequence:
MLRAKMLGRGPYKPLAILRHMGPLCATRPQHWRFQHSYAEKHSNCARHPLWTGPVSSPGGTQQSPINIQWTDSVYDPKLAPLRVSYDAASCRYLWNTGYFFQVEFDDSCEESGISGGPLGNHYRLKQFHFHWGATDEWGSEHMVDGHAYPAELHLVHWNSMKYENYKKATTGENGLAVIGVFLKLGAHHEALQRLVDILPEVRHKDTQVTMGPFDPSCLLPACRDYWTYPGSLTTPPLAESVTWIVHKMPIEVSPSQLSTFRTLLFSGRGEDEEVMVNNFRPLQPLRGRNVRSSFQVPRVGTKS

Annotated regions:
phrase: WRFQHSYAEKHSNCARHPLWTGPVSSPGGTQQSPINIQWTDSVYDPKLAPLRVSYDAASCRYLWNTGYFFQVEFDDSCEESGISGGPLGNHYRLKQFHFHWGATDEWGSEHMVDGHAYPAELHLVHWNSMKYENYKKATTGENGLAVIGVFLKLGAHHEALQRLVDILPEVRHKDTQVTMGPFDPSCLLPACRDYWTYPGSLTTPPLAESVTWIVHKMPIEVSPSQLSTFRTLLFSGRGEDEEVMVNNFRPLQPLRGRNVRSS
type: DOMAIN
name: CA_dom
description: Alpha carbonic anhydrase domain

phrase: SEHMVDGHAYPAELHL
type: CONSERVED_SITE
name: Carbonic_anhydrase_a-class_CS
description: Carbonic anhydrase, alpha-class, conserved site

phrase: WTGPVSSPGGTQQSPINIQWTDSVYDPKLAPLRVSYDAASCRYLWNTGYFFQVEFDDSCEESGISGGPLGNHYRLKQFHFHWGATDEWGSEHMVDGHAYPAELHLVHWNSMKYENYKKATTGENGLAVIGVFLKLGAHHEALQRLVDILPEVRHKDTQVTMGPFDPSCLLPACRDYWTYPGSLTTPPLAESVTWIVHKMPIEVSPSQLSTFRTLLFSGRGEDEEVMVNNFRPLQPLRGRNVRSS
type: DOMAIN
name: CA_dom
description: Alpha carbonic anhydrase domain

phrase: FQHSYAEKHSNCARHPLWTGPVSSPGGTQQSPINIQWTDSVYDPKLAPLRVSYDAASCRYLWNTGYFFQVEFDDSCEESGISGGPLGNHYRLKQFHFHWGATDEWGSEHMVDGHAYPAELHLVHWNSMKYENYKKATTGENGLAVIGVFLKLGAHHEALQRLVDILPEVRHKDTQVTMGPFDPSCLLPACRDYWTYPGSLTTPPLAESVTWIVHKMPIEVSPSQLSTFRTLLFSGRGEDEEVMVNNFRPLQPLRGRNVRSS
type: DOMAIN
name: CA_dom
description: Alpha carbonic anhydrase domain
Protein sequence:
MKAAVDLKPTLTIIKTEKVDIDLFPSPDMECADVPLLTPSSKEMMSQALKATFSGFAKEQQRLGIPKDPQQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKECFLELRPDFVGDILWEHLEILQKEEAKPYPANGVNAAYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPISSEELLSLKYENDYPSVILRDPVQTDSLQTDYFTIKQEVVTPDNMCMGRASRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFQSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRADMNKDKPVIPAAALAGYTGSGPIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDLQSLLGYTPEELHAMLDVKPDADE

Annotated regions:
phrase: QLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRF
type: DOMAIN
name: Ets_dom
description: Ets domain

phrase: ATFSGFAKEQQRLGIPKDPQQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKECFLELRPDFVGDILWEHLEILQKE
type: DOMAIN
name: Pointed_dom
description: Pointed domain

phrase: ATFSGFAKEQQRLGIPKDPQQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKECFLELRPDFVGDILWEHLEILQKEEA
type: DOMAIN
name: SAM_PNT-ETS-1
description: Protein C-ets-1, pointed domain

phrase: FSGFAKEQQRLGIPKDPQQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKECFLELRPDFVGDILWEHLEILQKE
type: DOMAIN
name: Pointed_dom
description: Pointed domain

phrase: PIQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRFVCDL
type: DOMAIN
name: Ets_dom
description: Ets domain

phrase: AYPESRYTSDYFISYGIEHAQCVPPSEFSEPSFITESYQTLHPISSEELLSLKYENDYPSVILRDPVQTDSLQTDYFTIKQEVVTPDNMCMGRASRGKLGGQDSFESIESYDSCDRLTQSWSSQSSFQSLQRVPSYDSFDSEDYPAALPNHKPKGTFKDYVRDRADMNKDKPVIPAAALAGYT
type: DOMAIN
name: Ets1_N_flank
description: Ets1, N-terminal flanking region of Ets domain

phrase: IQLWQFLLELLTD
type: DOMAIN
name: Ets_dom
description: Ets domain

phrase: DGWEFKLSDPDEVARRWG
type: DOMAIN
name: Ets_dom
description: Ets domain

phrase: RKNKPKMNYEKLSRGLRY
type: DOMAIN
name: Ets_dom
description: Ets domain

phrase: YDKNIIHKTAGKRYVYRF
type: DOMAIN
name: Ets_dom
description: Ets domain

phrase: SGFAKEQQRLGIPKDPQQWTETHVRDWVMWAVNEFSLKGVDFQKFCMNGAALCALGKECFLELRPDFVGDILWEHLEILQK
type: DOMAIN
name: Pointed_dom
description: Pointed domain

phrase: LWQFLLEL
type: DOMAIN
name: Ets_dom
description: Ets domain

phrase: IQLWQFLLELLTDKSCQSFISWTGDGWEFKLSDPDEVARRWGKRKNKPKMNYEKLSRGLRYYYDKNIIHKTAGKRYVYRF
type: DOMAIN
name: Ets_dom
description: Ets domain

phrase: KPKMNYEKLSRGLRY
type: DOMAIN
name: Ets_dom
description: Ets domain
Protein sequence:
MKIVENQPVVRRQSPQAEVTLTLPARPEAIAFAPQETALIVVDMQNAYASQGGYLDLAGFDISATAPVIANIKRAISAARAAGIKVIFFQNGWDNQYVEAGGQGSPNWHKSNALKTMRKRPELMGKLLARGDWDYDLVDELQPQAGDIVLPKPRYSGFFNTQLDSLLRSYGIHHLVFTGIATNVCVESTLRDGFFLEYFGIVLADATHQAGPQFAQQAALYNIETFFGWVSDVDSFCNTLAAPLSQTA

Annotated regions:
phrase: TALIVVDMQNAYASQGGYLDLAGFDISATAPVIANIKRAISAARAAGIKVIFFQNGWDNQYVEAGGQGSPNWHKSNALKTMRKRPELMGKLLARGDWDYDLVDELQPQAGDIVLPKPRYSGFFNTQLDSLLRSYGIHHLVFTGIATNVCVESTLRDGFFLEYFGIVLADATHQAGPQFAQQAALYNIETFFGWVSDV
type: DOMAIN
name: Isochorismatase-like_dom
description: Isochorismatase-like domain
Protein sequence:
MTQTGKRQRRKFGRIRQFNSGRWQASYTGPDGRVYIAPKTFNAKIDAEAWLTDRRREIDRQLWSPASGQEDRPGAPFGEYAEGWLKQRGIKDRTRAHYRKLLDNHILATFADTDLRDITPAAVRRWYATTAVGTPTMRAHSYSLLRAIMQTALADDLIDSNPCRISGASTARRVHKIRPATLDELETITKAMPDPYQAFVLMAAWLAMRYGELTELRRKDIDLHGEVARVRRAVVRVGEGFKVTTPKSDAGVRDISIPPHLIPAIEDHLHKHVNPGRESLLFPSVNDPNRHLAPSALYRMFYKARKAAGRPDLRVHDLRHSGAVLAASTGATLAELMQRLGHSTAGAALRYQHAAKGRDREIAALLSKLAENQEM

Annotated regions:
phrase: HKIRPATLDELETITKAMPDPYQAFVLMAAWLAMRYGELTELRRKDIDLHGEVARVRRAVVRVGEGFKVTTPKSDAGVRDISIPPHLIPAIEDHLHKHVNPGRESLLFPSVNDPNRHLAPSALYRMFYKARKAAGRPDLRVHDLRHSGAVLAASTGATLAELMQRLGHSTAGAALRYQHAAKGRDREIA
type: DOMAIN
name: Integrase_catalytic
description: Integrase, catalytic domain

phrase: LDELETITKAMPDPYQAFVLMAAWLAMRYGELTELRRKDIDLHGEVARVRRAVVRVGEGFKVTTPKSDAGVRDISIPPHLIPAIEDHLHKHVNPGRESLLFPSVNDPNRHLAPSALYRMFYKARKAAGRPDLRVHDLRHSGAVLAASTGATLAELMQRLGHSTAGAALRYQHAA
type: DOMAIN
name: Integrase_catalytic
description: Integrase, catalytic domain

phrase: FGEYAEGWLKQRGIKDRTRAHYRKLLDNHILATFADTDLRDITPAAVRRW
type: DOMAIN
name: Integrase_SAM-like_N
description: Integrase, SAM-like, N-terminal

phrase: APFGEYAEGWLKQRGIKDRTRAHYRKLLDNHILATFADTDLRDITPAAVRRWYATTAVGTPTMRAHSYSLLRAIMQTA
type: DOMAIN
name: CB
description: Core-binding (CB) domain
Protein sequence:
MIEIEKPRIETIEISEDAKFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVKYIEIEGVLHEFSAIDNVVEDVSTIIMNIKKLALKIYSEEDKTLEIDVKDEGDVTASDITHDSDVEILNPEIKIATVSKGGHLKIRLVANKGRGYALAEQNKTSDLPIGVIPVDSLYSPVERVNYTVENTRVGQSSDFDKLTLDVWTNGSITPQESVSLAAKILTEHLNIFVGLTDEAQNAEIMIEKEEDQKEKVLEMSIEELDLSVRSYNCLKRAGINSVQELADKSEADMMKVRNLGRKSLEEVKYKLEDLGLGLRKED

Annotated regions:
phrase: IEIEGVLHEFSAIDNVVEDVSTIIMNIKKLALKIYSEEDKTLEIDVKDEGDVTASDITHDSDVEILNPEIKIATVSKGGHLKIRLVANKGRGYALAEQNKTSDLPIGVIPVDSLY
type: DOMAIN
name: DNA-dir_RNA_pol_insert
description: DNA-directed RNA polymerase, insert domain

phrase: KEEDQKEKVLEMSIEELDLSVRSYNCLKRAGINSVQELADKSEADMMKVRNLGRKSLEEVKYKL
type: DOMAIN
name: RNAP_asu_C
description: RNA polymerase, alpha subunit, C-terminal

phrase: FGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVKYIEIEGVLHEFSAIDNVVEDVSTIIMNIKKLALKIYSEEDKTLEIDVKDEGDVTASDITHDSDVEILNPEIKIATVSKGGHLKIRLVANKGRGYALAEQNKTSDLPIGVIPVDSLYSPVERVNYTVENTRVGQSSDFDKLTLDVWTNGSITPQESVSLAAKILTEHLNIFVG
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: EPLERGYGTTLGNSLRRILLSSLPGAAVKYIEIEGVLHEFSAIDNVVEDVSTIIMNIKKLALKIYSEEDKTLEIDVKDEGDVTASDITHDSDVEILNPEIKIATVSKGGHLKIRLVANKGRGYALAEQNKTSDLPIGVIPVDSLYSPVERVNYTVENTRVGQSSDFDKLTLDVWTNGSITPQESVSLAAKILTEH
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type
Protein sequence:
MHGLLLAAAGLLSLPLHVLAHPQPSTNLAGRGVDLDAYRMADRSSYMSSDDMKLKQPAIASLSGGNYVDTATEVVKRMMPGMTFRMVDDHYVGESGISHVYFRQTMHGMDIDNADFNVNIGKDGKVLSLGHSFYTGPAPDKAPVEKRDFSDPMQAFHGACKALNLPINADKATIQTMNEHEVMFMGTSGAMSDPQGKLCYMAKEDGTLALTWRVETDMGDNWLLSYVDAKETDKVHNVVDYVSHATYQVYKWPIPDPTEGKREIVQNPWNLKTSPFTWISDGKTNYTTTRGNNAIAQANFDGGEDYLNNYRPDSKNLKFEYPYAPNMSPPKSYIDASVTQLFYSANMVHDLYYMLGFTEKAGNFQVNNRGQGGKGNDFVILNAQDGSGTNNANFATPPDGKPGRMRVYIWTKAKPSRDSSFEAGTVIHEYTHGLSNRLCGGPANAGCLNGMESGGMGEGWGDFFATAIRLKPNDNRNSNYVHGEWVNNSPKGNRLYPYSTNLQTNPLVYTSCNKYNEVHAIGTVWCSILYEVLWNLIDKHGKNDGPTPVFENGVPNDGKYLALKLVLDGMAIQPCKPTFVQARDAIIDADMNLTKGSNKCELWKAFAKRGLGVGAKYDPKNRTGSKAVPKECQ

Annotated regions:
phrase: TFRMVDDHYVGESGISHVYFRQTMHGMDIDNADFNVNIGKDGKVLSLGHS
type: DOMAIN
name: FTP_domain
description: FTP domain
Protein sequence:
MSNKMWGGRFASGPDAIMEEINASIGFDYRLAMQDIAGSKAHVAMLADVGIVSADDAADITQGLEAIKAEIESGAFTFSRALEDIHMNVESRLAALIGPAAGRLHTARSRNDQVALDFRLWVRDTIDALDGQLRGLQLALAEKAKLYAGAVMPGFTHMQSAQPVTFGHHLLAYVEMFARDRSRLRDARARLNESPLGAAALAGTSFPIDRHATARALGFDRPTANSLDSVSDRDFVLETLSAAAIAAVHLSRFAEEIVLWSTPQFGFARLSDKFSTGSSIMPQKRNPDAAELVRGKAGRVIGALTGLLVVMKGLPLTYSKDMQEDKEGAFDALHSLSLCLAAMTGMVKDIEPDTERMKAAAGAGYATATDLADWLVKALGLPFREAHHVTGRLVAAASAQDKGLEELALAEMQAVEPRINAGVFAVLGVENSVRSRMSYGGTAPANVSEQAERWLGALAAEPASKI

Annotated regions:
phrase: YATATDLADWLVKALGLPFREAHHVTGRLVAAASAQDKGLEELALAEMQAVEPRINAGVFAVLGVENS
type: DOMAIN
name: Arg_succ_lyase_C
description: Argininosuccinate lyase, C-terminal

phrase: GRFASGPDAIMEEINASIGFDYRLAMQDIAGSKAHVAMLADVGIVSADDAADITQGLEAIKAEIESGAFTFSRALEDIHMNVESRLAALIGPAAGRLHTARSRNDQVALDFRLWVRDTIDALDGQLRGLQLALAEKAKLYAGAVMPGFTHMQSAQPVTFGHHLLAYVEMFARDRSRLRDARARLNESPLGAAALAGTSFPIDRHATARALGFDRPTANSLDSVSDRDFVLETLSAAAIAAVHLSRFAEEIVLWSTPQFGFARLSDKFSTGSSIMPQKRNPDAAELVRGKAGRVI
type: DOMAIN
name: Fumarate_lyase_N
description: Fumarate lyase, N-terminal

phrase: GSSIMPQKR
type: CONSERVED_SITE
name: Fumarate_lyase_CS
description: Fumarate lyase, conserved site
Protein sequence:
MVKLFCSIVGVAGSPFSVEVNEGKTVDDLKKAIKAENLDDPTLRNVAPKNLQLFLAKKGDAWLRYNEDLDTYLQSEIDTSSYLHMRASWKLSKPTLFGPDVSLGEDVVHVLVVVPGQRLPIAATAIHEPHPARKKRWEELNKILDRNQRAKVNAAGESSTGYSYVSFSDVDRVMRARRYEQPRKVIENEKIDVLYEYLLLLTKAFGEIVNGKEAKRLYFIVPVLVCVCGLFDGEVRILAEETVTGKRVHGDGAFEFVIERGSKRVCIVKAKRDDFQQGLAQAYVGSEVLADLEGLTDLFSIVTNFKEWYFSRCLNDRVERDDATMDMEHDIPTREAVKKIAEKIYSMLS

Annotated regions:
phrase: VKLFCSIVGVAGSPFSVEVNEGKTVDDLKKAIKAENLDDPTLRNVAPKNLQLFLAKKGDAWLRYNEDLDTYLQSEIDTSSYLHMRASWKLSKPTLFGPDVSLGEDVVHVLV
type: DOMAIN
name: Crinkler_N
description: Crinkler effector protein, N-terminal
Protein sequence:
MQVDLLGSAQSAHALHLFHQHSPLVHCMTNDVVQTFTANTLLALGASPAMVIETEEASQFAAIASALLINVGTLTQPRAQAMRAAVEQAKSSQTPWTLDPVAVGALDYRRHFCHELLSFKPAAIRGNASEIMALAGIANGGRGVDTTDAAANAIPAAQTLARETGAIVVVTGEMDYVTDGHRIIGIHGGDPLMTKVVGTGCALSAVVAACCALPGDTLENVASACHWMKQAGERAVARSEGPGSFVPHFLDALWQLTQEVQA

Annotated regions:
Protein sequence:
MGGWSSKPRKGMGTNLAVPNPLGFFPDHQLDPAFKANSDNPDWDLNPHKDNWPDANKVGVGAFGPGFTPPHGGLLGWSPQAQGLLTTVPAAPPPASTSRQSGRQPTPLSPPLRDTHPQAMQWNSTTFHQTLQDPRVRALYFPAGGSSSGTVSPAQNTVSAISSTLSKTGDPVPNMENISSGLLGPLLVLQAGFFLLTKILTIPQSLDSWWTSLNFLGQTPVCLGQNSQSQISSHSLTCCPPICPGYRWMCLRRFIIFLCILLLCLIFLLVLLDCQGMLPVCPLIPGSSTTSTGPCKTCTTPAQGTSMFPSCCCTKPTDGNCTCIPIPSSWAFAKFLWEWASVRFSWLSLLVPFVQWFVGLSPTVWLSVIWMMWFWGPSLCNILSPFMPLLPIFFCLWVYI

Annotated regions:
Protein sequence:
MKSTSFITLLLLSYFIVEAHSSIFHWDDERLFKHDDTHSWLTDVQKAELETLKHQPIQLRDKTLEFYNQLPTNEKAIWDKFYTKYCVVWLKEVASDEEIGKLKELESEKNKEALLTSIYSFKDRLDEVDQRKVELWKETCDEYVTKGLSRKRRDSNKNFEEFIYWMTDEQKQSMNDMKTAGKSFNEIHKEGRKYFKALTIDKQSSLKEQFKDKCKKYFMQIANSDEVEKIKSLNDDEIRHVVKNAVARLNGEDKEFAVKMETLCEDVLAFKARKNDIDDKINRRLSWMTDEQKQVVKQLYADGRSQADIRAKIFEFLSSIDGPAGVAAKAQIQKECYKWMEEVATAEEIAALHELHEIDHDGCRRKVREFIGRLPEDRKLEVEKDLPFCEKIWYRDHGDHNSHKHGAHHHHRHLAVRRRRHLYAIEKFLDWLKPEQKHELEKIENSGAHFDDVIAEVKKFYGLLPEEKKIELKAKFKSQCYDWVKEVATSEEMNDIMKMHESKNHSDLMKRLTELENRLTEDQKHTIEHVREVCLGLWEVQNTNKQHKQSLEEAMDAYLSWMTDEDKEKVKAIYETSNRQTFYDEILKIMESSEDEVKAKATEKLEAACKHYGTNILGEENVDIIREMKKNGATFEEISNRVDELIEGITDSDRKEKAYRMSKLCKKIYSLGHSKQLQQYDFENVLQKYLTWLDDSQKNELRTMSDNKEKIYKKIIDYFDGTIGEVKEKAVEELQLACNHYIKSIVGEEKAMEIKQLKEEGKSSEEIA

Annotated regions:
phrase: DFENVLQKYLTWLDDSQKNELRTMSDNKEKIYKKIIDYFDGTIGEVKEKAVEELQLACNHYIKSIVGEEKAMEIKQLKEEGKSSEE
type: DOMAIN
name: ABA-1_nematode
description: Polyprotein allergen, nematode

phrase: RRDSNKNFEEFIYWMTDEQKQSMNDMKTAGKSFNEIHKEGRKYFKALTIDKQSSLKEQFKDKCKKYFMQIANSDEVEKIKSLNDDEIRHVVKNAVARLNGEDKEFAVKMETLCED
type: DOMAIN
name: ABA-1_nematode
description: Polyprotein allergen, nematode

phrase: DDTHSWLTDVQKAELETLKHQPIQLRDKTLEFYNQLPTNEKAIWDKFYTKYCVVWLKEVASDEEIGKLKELESEKNKEALLTSIYSFKDRLDEVDQRKVELWKETCD
type: DOMAIN
name: ABA-1_nematode
description: Polyprotein allergen, nematode

phrase: NDIDDKINRRLSWMTDEQKQVVKQLYADGRSQADIRAKIFEFLSSIDGPAGVAAKAQIQKECYKWMEEVATAEEIAALHELHEIDHDGCRRKVREFIGRLPEDRKLEVEKDLPFCEKI
type: DOMAIN
name: ABA-1_nematode
description: Polyprotein allergen, nematode

phrase: QSLEEAMDAYLSWMTDEDKEKVKAIYETSNRQTFYDEILKIMESSEDEVKAKATEKLEAACKHYGTNILGEENVDIIREMKKNGATFEEISNRVDELIEGITDSDRKEKAYRMSKLCKKI
type: DOMAIN
name: ABA-1_nematode
description: Polyprotein allergen, nematode

phrase: RRRHLYAIEKFLDWLKPEQKHELEKIENSGAHFDDVIAEVKKFYGLLPEEKKIELKAKFKSQCYDWVKEVATSEEMNDIMKMHESKNHSDLMKRLTELENRLTEDQKHTIEHVREVCLGL
type: DOMAIN
name: ABA-1_nematode
description: Polyprotein allergen, nematode
Protein sequence:
MTNRLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESSVMSGSELHADNSILGMGL

Annotated regions:
phrase: SVSSWLPIEQYAGYSASKAAVSALTRAA
type: CONSERVED_SITE
name: Sc_DH/Rdtase_CS
description: Short-chain dehydrogenase/reductase, conserved site
Protein sequence:
MRLAAYMKTLMSHILAAMAPRHDGAIFPNAPLWPLAPACWHGRDEHDRATMTDPIFKTSAEDAPRRSLDSEGRLDLIGLSREEMAEAFAELGEKSFRVKQVWLWLYNRGVTTIDEMTNLSKPLRDRMQERFFISRPQVSREQTSVDSTRKWLLRFGDRNEAETVYIPDPDEERGAVCISTQVGCTLTCRFCHTGTQKLVRNLTAAEIVGQFLIARDSYGEWPTPNETGRLLSNVVVMGMGEPLFNYDATVNALKILTDPDGISLSKRRVTLSTSGVVPRMYDLGRDVGVNLAISLHAATDDVRSEIMPINKKWPLKELMQACRDYPGATNARRITFEYIMLKGVNDSDADARQLARMVKGIPCKFNLLPFNPWPGSTLECSDWARIERFSDVLAGLGYSAPIRTPRGRDILAACGQLKSDSQRERKARGLAADASLVGVLPETSAPATPAA

Annotated regions:
phrase: ISTQVGCTLTCRFCHTGTQKLVRNLTAAEIVGQFLIARDSYGEWPTPNETGRLLSNVVVMGMGEPLFNYDATVNALKILTDPDGISLSKRRVTLSTSGVVPRMYDLGRDVGVNLAISLHAATDDVRSEIMPINKKWPLKELMQACRDYPGATNARRITFEYIMLKGVNDSDA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: RLDLIGLSREEMAEAFAELGEKSFRVKQVWLWLYNRGVTTIDEMTNLSKPLRDRMQERFFISRPQVSREQTSVDSTRKWLLRFGDRNEAETVYIPDPDEERGAVCISTQVGCTLTCRFCHTGTQKLVRNLTAAEIVGQFLIARDSYGEWPTPNETGRLLSNVVVMGMGEPLFNYDATVNALKILTDPDGISLSKRRVTLSTSGVVPRMYDLGRDVGVNLAISLHAATDDVRSEIMPINKKWPLKELMQACRDYPGATNARRITFEYIMLKGVNDSDADARQLARMVKGIPCKFNLLPFNPWPGSTLECSDWARIERFSDVLAGLGYSAPIRTPRGRDILAACGQLKSDSQRERK
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: DLIGLSREEMAEAFAELGEKSFRVKQVWLWLYNRGVTTIDEMTNLSKPLRDRMQERFF
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: DEERGAVCISTQVGCTLTCRFCHTGTQKLVRNLTAAEIVGQFLIARDSYGEWPTPNETGRLLSNVVVMGMGEPLFNYDATVNALKILTDPDGISLSKRRVTLSTSGVVPRMYDLGRDVGVNLAISLHAATDDVRSEIMPINKKWPLKELMQACRDYPGATNARRITFEYIMLKGVNDSDADARQLARMVKGIPCKFNLLPFNPWPGSTLECSDWARIERFSDVLAGLGY
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MAKDHYFDISAKLDMMEMKNAIEQAKKEVSTRFDFKGIMVEIDLNEKAKVLNLSSSSDSKIDALKDIVMSKMIKRGLSTKSLDEVKTEGISGGNVKVVYRIVDSIEKDEAKKIVKAIKDAKLKVTPSIQGDEIRVTGKKIDDLQAVIALVKQMEDLKAPLTFGNFK

Annotated regions:
Protein sequence:
MIVTEALTKAFSGPFGAIEVLRGIDLEIAKSEVFGVIGRSGAGKSTLVRCLNLLERPTGGRVWVGGRELTSFDERSLRQARRDIGMIFQHFNVLSSRTAADNIALPLELVGLPGPVIRRRVAELLDLVGLTDKGEAYPAELSGGQKQRVGIARALASKPSVLLCDEATSALDPETTKSILALLKDINRRLGLTIVLITHEMHVIKDIADRVAVLDHGRVVEQGRVFDVFTDPQHAVTRAFVHEVLNRDLPEVLVPRLATTRLEGGPVIWRITFTGPSANDPVVSEMVRRFGLSFNILYGHIDYIQGLPYGTLVVEAAGTESARHAALAYLSQKNLSVEVLGHVATPDPVTA

Annotated regions:
phrase: GPVIWRITFTGPSANDPVVSEMVRRFGLSFNILYGHIDYIQGLPYGTLVVEAAGTESARHAALAYLSQKNLSVEV
type: DOMAIN
name: NIL_domain
description: NIL domain

phrase: KSEVFGVIGRSGAGKSTLVRCLNLLERPTGGRVWVGGRELTSFDERSLRQARRDIGMIFQHFNVLSSRTAADNIALPLELVGLPGPVIRRRVAELLDLVGLTDKGEAYPAELSGGQKQRVGIARALASKPSVLLCDEATSALDPETTKSILALLKDINRRLGLTIVLITHEMHVIKDIADRVAVLDHGRVVEQG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: IWRITFTGPSANDPVVSEMVRRFGLSFNILYGHIDYIQGLPYGTLVVEAAGTESARHAALAYLSQKNLSVE
type: DOMAIN
name: NIL_domain
description: NIL domain

phrase: LSGGQKQRVGIARA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: LRGIDLEIAKSEVFGVIGRSGAGKSTLVRCLNLLERPTGGRVWVGGRELTSFDERSLRQARRDIGMIFQHFNVLSSRTAADNIALPLELVGLPGPVIRRRVAELLDLVGLTDKGEAYPAELSGGQKQRVGIARALASKPSVLLCDEAT
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: IVTEALTKAFSGPFGAIEVLRGIDLEIAKSEVFGVIGRSGAGKSTLVRCLNLLERPTGGRVWVGGRELTSFDERSLRQARRDIGMIFQHFNVLSSRTAADNIALPLELVGLPGPVIRRRVAELLDLVGLTDKGEAYPAELSGGQKQRVGIARALASKPSVLLCDEATSALDPETTKSILALLKDINRRLGLTIVLITHEMHVIKDIADRVAVLDHGRVVEQGRVFDVFTDPQHAVTRAF
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: MIVTEALTKAFSGPFGAIEVLRGIDLEIAKSEVFGVIGRSGAGKSTLVRCLNLLERPTGGRVWVGGRELTSFDERSLRQARRDIGMIFQHFNVLSSRTAADNIALPLELVGLPGPVIRRRVAELLDLVGLTDKGEAYPAELSGGQKQRVGIARALASKPSVLLCDEATSALDPETTKSILALLKDINRRLGLTIVLITHEMHVIKDIADRVAVLDHGRVVEQGRVFDVFTDP
type: DOMAIN
name: MetN_ABC
description: Methionine import ATP-binding protein MetN, ATP-binding domain