nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MNKQRFVVIDVETTGNSPKKGDKIIQIAAVVIENGQITERFSKYINPNKSIPAFIEQLTGISNQMVENEQPFEAVAEEVFQLLDGAYFVAHNIHFDLGFVKYELHKAGFQLPDCEVLDTVELSRIVFPGFEGYKLTELSEELQLRHDQPHRADSDAEVTGLIFLEILEKLRQLPYPTLKQLRRLSQHFISDLTHLLDMFINENRHTEIPGYTRFSSFSVREPEAIDVRINEDENFSFEIESWEAGNEKALSELMPGYEKRDGQMMMMREVADAFANREHALIEAPPGIGKTIGYLIPAALFAKKSKKPVIISTYSTLLQQQILTKDLPIVQDLFPFPVTAAILKGQSHYLCLYKFEQVLHEEDDNYDAVLTKAQLLVWLTETNTGDVAELNLPSGGKLLWDRLAYDDDSYKRSRSEHVIGFYERAKQIAMRSDLVITNHSLLLTDEGSHKKRLPESGTFIIDEAHHFERAASEHLGKRATYIELHTKLSRIGTLKEQGLLKKMRQLFQRNSLPVDSFFELEEWLQHVQAESDAFFSSVHSFVKRRKPKEDLNRLVFKVNKESQDKSWSILTDGAERLCSMLTHLQQLFEAQSSLMEKHLKGMKSKTVFLADEYQRSMKGLQHYCQTLQKLFFGSDDDEAVWIEIDAKGAKNAVAIYAQPLEPGELLADQFFARKNSVVLTSATLTVEGSFQFMIERLGLSDFFPRTMRIESPFSYDERMQVMIPKEMKSIQDTGQPEFIQDTARYIELMAKEKQPKILVLFTSHDMLKKVHQELKHNMSASGIQLLAQGITGGSPGKLMKTFKTSNQAILLGTNHFWEGVDFPGDELTTVMIVRLPFRSPDHPLHAAKCELARKKGKNPFQTVSLPEAVLTFRQGIGRLLRSAGDKGTIIILDRRIKTAGYGRLFLDALPTTSVSEMTDSELEAYVAGEKE

Annotated regions:
phrase: ALSELMPGYEKRDGQMMMMREVADAFANREHALIEAPPGIGKTIGYLIPAALFAKKSKKPVIISTYSTLLQQQILTKDLPIVQDLFPFPVTAAILKGQSHYLCLYKFEQVLHEEDDNYDAVLTKAQLLVWLTETNTGDVAELNLPSGGKLLWDRLAYDDDSYKRSRSEHVIGFYERAKQIAMRSDLVITNHSLLLTDEGSHKKRLPESGTFIIDEAHHFERAASEHLGKRATYIELHTKLSRIGTLKEQGLLKKMRQLFQR
type: DOMAIN
name: Helic_SF1/SF2_ATP-bd_DinG/Rad3
description: Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type

phrase: LMAKEKQPKILVLFTSHDMLKKVHQELKHNMSASGIQLLAQGITGGSPGKLMKTFKTSNQAILLGTNHFWEGVDFPGDELTTVMIVRLPFRSPDHPLHAAKCELARKKGKNPFQTVSLPEAVLTFRQGIGRLLRSAGDKGTIIILDRRIKTAGYGRLFLDALP
type: DOMAIN
name: ATP-dep_Helicase_C
description: ATP-dependent helicase, C-terminal

phrase: PGYEKRDGQMMMMREVADAFANREHALIEAPPGIGKTIGYLIPAALFAKKSKKPVIISTYSTLLQQQILTKDLPIVQDLFPFPVTAAILKGQSHYLCLYKFEQVLHEEDDNYDAVLTKAQLLVWLTETNTGDVAELNLPSGGKLLWDRLAYDDDSYKRSRSEHVIGFYERAKQIAMRSDLVITNHSLLLTDEGSHKKRLPESGTFIIDEAHHFERAASEHLGKRATYIELHTKLSRIGTLKEQGLLKKMRQLFQRNSLPVDSFFELEEWLQH
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: VVIDVETTGNSPKKGDKIIQIAAVVIENGQITERFSKYINPNKSIPAFIEQLTGISNQMVENEQPFEAVAEEVFQLLDGAYFVAHNIHFDLGFVKYELHKAGFQLPDCEVLDTVELSRIVFPGFEGYKLTELSEELQLRHDQPHRADSDAEVTGLI
type: DOMAIN
name: Exonuclease_RNaseT/DNA_pol3
description: Exonuclease, RNase T/DNA polymerase III

phrase: HDMLKKVHQELKHNMSASGIQLLAQGITGGSPGKLMKTFKTSNQAILLGTNHFWEGVDFPGDELTTVMIVRLPFRSPDHPLHAAKCELARKKGKNPFQTVSLPEAVLTFRQGIGRLLRSAGDKGTIIILDRRIK
type: DOMAIN
name: ATP-dep_Helicase_C
description: ATP-dependent helicase, C-terminal

phrase: RFVVIDVETTGNSPKKGDKIIQIAAVVIENGQITERFSKYINPNKSIPAFIEQLTGISNQMVENEQPFEAVAEEVFQLLDGAYFVAHNIHFDLGFVKYELHKAGFQLPDCEVLDTVELSRIVFPGFEGYKLTELSEELQLRHDQPHRADSDAEVTGLIFLEILEKLR
type: DOMAIN
name: Exonuclease_RNaseT/DNA_pol3
description: Exonuclease, RNase T/DNA polymerase III

phrase: NKQRFVVIDVETTGNSPKKGDKIIQIAAVVIENGQITERFSKYINPNKSIPAFIEQLTGISNQMVENEQPFEAVAEEVFQLLDGAYFVAHNIHFDLGFVKYELHKAGFQLPDCEVLDTVELSRIVFPGFEGYKLTELSEELQLRHDQPHRADSDAEVTGLIFLEILEKLRQLPYPTLKQLRRLSQHFISDLTHLL
type: DOMAIN
name: DnaQ
description: DNA polymerase III epsilon subunit, exonuclease domain
Protein sequence:
MNGIQVDINRLKKGEVSLGTSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAIADIVQYHLELYTSQYGTPSTETAASVFKELCYENKDNLTAGIIVAGYDDKNKGEVYTIPLGGSVHKLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTAAGVERLIFYPDEYEQL

Annotated regions:
phrase: MAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAA
type: CONSERVED_SITE
name: Proteasome_bsu_CS
description: Proteasome beta-type subunit, conserved site
Protein sequence:
MTKKPYFRLSIISCLLISCYVKAETQSIKDTKEAISSEVDTQSTEDSELETISVTAEKVRDRKDNEVTGLGKIIKTSESISREQVLNIRDLTRYDPGISVVEQGRGASSGYSIRGMDRNRVALLVDGLPQTQSYVVQSPLVARSGYSGTGAINEIEYENVKAVEISKGGSSSEYGNGALAGSVTFQSKSAADILEGDKSWGIQTKNAYSSKNKGFTHSLAVAGKQGGFEGLAIYTQRNSIETQVHKDALKGVQSYNRLIAKPENQSAYFVMEDECPKGYDECIPSAKPPAILSTKKETVSVSDYTGANRIKPNPMKYESQSWFLRGGYHFSEQHYIGGIFEFTQQKFDIRDMTFPAYLSPTEKGDLANRPFYPKQDYGAYQHIEDGRGVKYASGLYFDEHHRKQRVGIEYIYENKNKAGIIDKAVLSANQQNIILDSYMRHTHCSLYPNPSKNCRPTLDKPYSYYRSDRNVYKEKHNMLQLNLEKKIQQNWLTHQIVFNLGFDDFTSALQHKDYLTRRVIATADSISDKTGKTRRNGLREYPYLYPKPKPYFAGEDHCNYQGSSSNYRDCKVRLIKGKNYYFAARNNMALGKYVDLGLGIRYDVSRTKANESTISVGKFKNFSWNTGIVIKPTEWLDLSYRLSTGFRNPSFAEMYGWRYGGKNDEVYVGKFKPETSRNQEFGLALKGDFGNIEISHFSNAYRNLIAFAEELSKNGTGKGNYGYHNAQNAKLVGVNITAQLDFNGLWKRIPYGWYATFAYNRVKVKDQKINAGLASVSSYLFDAIQPSRYIIGLGYDHISNTWGVNATFTQSKAKSQNELLGKRALGNNSRDVKSTRKLTRAWHILDVSGYYMANKNIMLRLGIYNLFNYRYVTWEAVRQTAQGAVNQHQNVGNYTRYAASGRNYTLTLEMKF

Annotated regions:
phrase: DKPYSYYRSDRNVYKEKHNMLQLNLEKKIQQNWLTHQIVFNLGFDDFTSALQHKDYLTRRVIATADSISDKTGKTRRNGLREYPYLYPKPKPYFAGEDHCNYQGSSSNYRDCKVRLIKGKNYYFAARNNMALGKYVDLGLGIRYDVSRTKANESTISVGKFKNFSWNTGIVIKPTEWLDLSYRLSTGFRNPSFAEMYGWRYGGKNDEVYVGKFKPETSRNQEFGLALKGDFGNIEISHFSNAYRNLIAFAEELSKNGTGKGNYGYHNAQNAKLVGVNITAQLDFNGLWKRIPYGWYATFAYNRVKVKDQKINAGLASVSSYLFDAIQPSRYIIGLGYDHISNTWGVNATFTQSKAKSQNELLGKRALGNNSRDVKSTRKLTRAWHILDVSGYYMANKNIMLRLGIYN
type: DOMAIN
name: TonB-dep_rcpt_b-brl
description: TonB-dependent receptor-like, beta-barrel

phrase: TRYAASGRNYTLTLEMK
type: CONSERVED_SITE
name: TonB_rcpt_CS
description: TonB-dependent receptor, conserved site

phrase: TSESISREQVLNIRDLTRYDPGISVVEQGRGASSGYSIRGMDRNRVALLVDGLPQTQSYVVQSPLVARSGYSGTGAINEIEYENVKAVEISKGGSSSEYGNGALA
type: DOMAIN
name: Plug_dom
description: TonB-dependent receptor, plug domain

phrase: MTKKPYFRLSIISCLLISCYVKAETQSIKDTKEAISSEVDTQSTEDSELETISVTA
type: CONSERVED_SITE
name: TonB_box_CS
description: TonB box, conserved site
Protein sequence:
MLSRVARCSRTLNQVTRNGQSGLFSAVLRTSIRQNSTDSPASNNANEIYTKLSDTKDPQRNQFFQYTWGSWLTNDKSKKKQRETTFSIEGLTLFIDRINQLESKLAQPKSLEGAFVLANNKELLGSTKDKVIVRSIASIHEGKHHRVYKITLNTGKELVLRIPYKLDSDVAIASKLKSEVATTDFLKLKLGLNVPRVLAYGVDSNNEIKSPFILQEFISGELLMKKWHPLLPDSEETNKCLHEVIDPIAQFQNKILSVTFNKFGSLYFHDDVEGSLQNDVPYEGETDSALSNRWRIGPSVERQFTRNKNKLQQSIIDQYNGPWDASNPTAVLESVADIELENAKSKLSLINADAGANENDRALITKQIKTFENLKKISPQLINDKSKSIMNVEVLFKPRLYIPDLDPLNVIQHSDTENYFIDFEGSTIKPFILTSYPKFVAYQGAKIYNLEEDVPGYKEMEELEKQQYEFMYYKTRNERMWEFELNKYRHDLIAIASPHIKVLKSPYLQALDVKNGKDYLYVEGSIVQLQAMWEAYVANELVNSKDTKFPIEYTAEYLDQHQQELSDYQLETVSSPFSATGGWIPQDMFDTLKAQGILVETKDGNYKVETEKVLENPPAQPEEK

Annotated regions:
Protein sequence:
MTEIDYYELLEISRNSDKSTIKKAYRQMAMKYHPDKNPGDNEAEEKFKAINEAYQVLSDDEKKSIYDRYGKAGLEGHGQRGGGFSGGFDDLGSIFEEMFGFGTSSRSRRERKTYNYNLDVTIEVKLEFNEAVFGCNKEINYKYKTACKPCEGTGAKDGKLSTCPTCKGQGQVHSRQGFMTFAQTCPRCGGTGQATTDSCKSCKGTGYEEVKDNFKVDIPEGVNDGMRIRVSNKGNIAPNGQRGDLYLQVSVKEDSHFVRHDDDIYFEAPIFFTQVALGGTIKVPSLRGELELEIPKGAKDKQQFTFKGEGVKSVQGYGKGDLIIQIKIEYPKALNNEQKELLEKLQDSFGIESKPHETTFEGMFDKVKKWFS

Annotated regions:
phrase: IDYYELLEISRNSDKSTIKKAYRQMAMKYHPDKNPGDNEAEEKFKAINEAYQVLSDDE
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: TIEVKLEFNEAVFGCNKEINYKYKTACKPCEGTGAKDGKLSTCPTCKGQGQVHSRQGFMTFAQTCPRCGGTGQATTDSCKSCKGTGYEEVKDNFKVDIPEGVNDGMRIRVSNKGNIAPNGQRGDLYLQVSVKEDSHFVRHDDDIYFEAPIFFTQVALGGTIKVPSLRGELELEIPKGAKDKQQFTFKGEGVKSVQGYGKGDLIIQIKIEY
type: DOMAIN
name: DnaJ_C
description: Chaperone DnaJ, C-terminal

phrase: FKAINEAYQVLSDDEKKSI
type: CONSERVED_SITE
name: DnaJ_domain_CS
description: DnaJ domain, conserved site

phrase: CKPCEGTGAKDGKLSTCPTCKGQGQVHSRQGFMTFAQTCPRCGGTGQATTDSCKSCKGT
type: DOMAIN
name: HSP_DnaJ_Cys-rich_dom
description: Heat shock protein DnaJ, cysteine-rich domain

phrase: CKPCEGTGAKDGKLSTCPTCKGQGQVHSRQGFMTFAQTCPRCGGTGQATTDSCKSCKGT
type: DOMAIN
name: HSP_DnaJ_Cys-rich_dom
description: Heat shock protein DnaJ, cysteine-rich domain

phrase: GCNKEINYKYKTACKPCEGTGAKDGKLSTCPTCKGQGQVHSRQGFMTFAQTCPRCGGTGQATTDSCKSCKGTGYEEV
type: DOMAIN
name: HSP_DnaJ_Cys-rich_dom
description: Heat shock protein DnaJ, cysteine-rich domain

phrase: DYYELLEISRNSDKSTIKKAYRQMAMKYHPDKNPGDNEAEEKFKAINEAYQVLS
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: DYYELLEISRNSDKSTIKKAYRQMAMKYHPDKNPGDNEAEEKFKAINEAYQVLSDDEKKSIYDRY
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: DYYELLEISRNSDKSTIKKAYRQMAMKYHPDKNPGDNEAEEKFKAINEAYQVLSDDEKKSIY
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: YELLEISRNSDKSTIKKA
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: YRQMAMKYHPDKNPG
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: EAEEKFKAINEAYQVLSDDE
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: KKSIYDRYGKAGLEGHGQR
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain
Protein sequence:
MENNLMLLAGSSHPELAKKIAAYIGVPLAKMDLFKFANDDTFVKVNENIRQRDVFVIQSTCRPVNDNIMELLIIMDACKRASTNSITAVLPYYGYARSDKKDQPRVPITAKLVADLLTAAGADRIICLDMHAEAIQGFFNIPVDHLYAMPIFIDYLKASKIPDLMIVSPDAGGVARARAYAKRVGAELAIVDKRRVPGNQDKTEMFHVIGDVRGKSCVLVDDIIDTAGTITKAAEILLDRGAREVRAMAPHATLSHPACERLAKSPMVEVLVSDTVPIPPEKCLAKIRVLSIAPLLGETIKRVHAGDSVSSLFV

Annotated regions:
phrase: AMPIFIDYLKASKIPDLMIVSPDAGGVARARAYAKRVGAELAIVDKRRVPGNQDKTEMFHVIGDVRGKSCVLVDDIIDTAGTITKAAEILLDRGAREVRAMAPHATLSHPACERLAKSPMVEVLVSD
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: LMLLAGSSHPELAKKIAAYIGVPLAKMDLFKFANDDTFVKVNENIRQRDVFVIQSTCRPVNDNIMELLIIMDACKRASTNSITAVLPYYGYARSDKKDQPRVPITAKLVADLLTAA
type: DOMAIN
name: Pribosyltran_N
description: Ribose-phosphate pyrophosphokinase, N-terminal domain
Protein sequence:
MRVMGTQRNYPRLWRWGMMIFWIMITCNAENLWVTVYYGVPVWRDANATLFCASEAKAYNTEVHNVWATHACVPTDPNPQELHLENVTEKFNMWKNNMVEQMHEDIISLWDESLKPCVKLTPLCVTLNCQNFNSSNNETVISSSSNTSIDMREEIKNCSFNVTTELRDRQKKEFALFYRLDVVPINGSDEKNISQYRLINCNTSAITQACPKVTFEPIPIHYCAPAGFAILKCRDKKFNGTGPCKNVSTVQCTHGIKPVVSTQLLLNGSLAEEEIVIRSENFTNNAKTIIVQLKKPVGINCTRPGNNTRKSVHIGPGQTFYATGDIIGDIRQAHCNVSRTAWNETLQEVARQLKKHFNKTTIIFANHSGGDLEITTHSFNCGGEFFYCNTSRLFNSTWNNINSTGYNLTGSQENITLQCRIKQIVRMWQRVGQAMYAPPIRGEIRCNSNITGLLLTRDGGNENNNTNETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRARRRVVEREKRAVGLGAVFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLKAIEAQQHLLRLTVWGIKQLQARVLALERYLKDQQLLGIWGCSGKIICTTNVPWNSSWSNKTYNDIWDNMTWLQWDKEVSNYTQIIYELIEESQIQQEKNEQDLLALDKWASLWNWFDISNWLWYIKIFIMIVGGLIGLRIVFAVLTIINRVRQGYSPLSFQTLTHHQREPDRPERIEEGGGEQDRDKSVRLVNGFLALAWDDLRNLCLF

Annotated regions:
phrase: VQARQLLSGIVQQQSNLLKAIEAQQHLLRLTVWGIKQLQARVLALERYLKDQQLLGIWGCSGKIICTTNVPWNSSWSNKTYNDIWDNMTWLQWDKEVSNYTQIIYELIEESQIQQEKNEQDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASITLTVQARQLLSGIVQQQSNLLKAIEAQQHLLRLTVWGIKQLQARVLALERYLKDQQLLGIWGCSGKIICTTNVPWNSSWSNKTYNDIWDNMTWLQWDKEVSNYTQIIYELIEESQIQQEKNEQDLLALDKWASLWNWFDISNWLWYIKIFIMIVGGLIGLRIVFAVLTIINRVRQGYSPLSFQTL
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWRDANATLFCASEAKAYNTEVHNVWATHACVPTDPNPQELHLENVTEKFNMWKNNMVEQMHEDIISLWDESLKPCVKLTPLCVTLNCQNFNSSNNETVISSSSNTSIDMREEIKNCSFNVTTELRDRQKKEFALFYRLDVVPINGSDEKNISQYRLINCNTSAITQACPKVTFEPIPIHYCAPAGFAILKCRDKKFNGTGPCKNVSTVQCTHGIKPVVSTQLLLNGSLAEEEIVIRSENFTNNAKTIIVQLKKPVGINCTRPGNNTRKSVHIGPGQTFYATGDIIGDIRQAHCNVSRTAWNETLQEVARQLKKHFNKTTIIFANHSGGDLEITTHSFNCGGEFFYCNTSRLFNSTWNNINSTGYNLTGSQENITLQCRIKQIVRMWQRVGQAMYAPPIRGEIRCNSNITGLLLTRDGGNENNNTNETFRPGGGDMRDNWRSELYKYKVVKIEPLGVAPTRARRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MRHTGSWKLWTWVTTFLLPACTCLTVRDKPETTCPTLRTERYQDDRNKSELSGFDLGESFALRHAFCEGDKTCFKLGSVLLIRDTVKIFPKGLPEEYAIAVMFRVRRSTKKERWFLWKILNQQNMAQISVVIDGTKKVVEFMFRGAEGDLLNYVFKNRELRPLFDRQWHKLGIGVQSRVLSLYMDCNLIASRHTEEKNSVDFQGRTIIAARASDGKPVDIELHQLRIYCNANFLAEESCCNLSPTKCPEQDDFGSTTSSWGTSNTGKMSSYLPGKQELKDTCQCIPNKEEAGLPGTLRSIGHKGDKGEPGEHGLDGTPGLPGQKGEQGLEGIKGEIGEKGEPGAKGDSGLDGLNGQDGLKGDSGPQGPPGPKGDKGDMGPPGPPALTGSIGIQGPQGPPGKEGQRGRRGKTGPPGNPGPPGPPGPPGLQGLQQPFGGYFNKGTGEHGASGPKGEKGDTGLPGFPGSVGPKGHKGEPGEPLTKGEKGDRGEPGLLGPQGIKGEPGDPGPPGLLGSPGLKGQQGPAGSMGPRGPPGDVGLPGEHGIPGKQGVKGEKGDPGGRLGPPGLPGLKGDAGPPGISLPGKPGLDGNPGSPGPRGPKGERGLPGLHGSPGDTGPPGVGIPGRTGSQGPAGEPGIQGPRGLPGLPGTPGMPGNDGAPGKDGKPGLPGPPGDPIALPLLGDIGALLKNFCGNCQANVPGLKSIKGDDGSTGEPGKYDPAARKGDVGPRGPPGFPGREGPKGSKGERGYPGIHGEKGDEGLQGIPGLSGAPGPTGPPGLTGRTGHPGPTGAKGDKGSEGPPGKPGPPGPPGVPLNEGNGMSSLYKIQGGVNVPGYPGPPGPPGPKGDPGPVGEPGAMGLPGLEGFPGVKGDRGPAGPPGIAGISGKPGAPGPPGVPGEQGERGPIGDTGFPGPEGPSGKPGINGKDGLPGAQGIMGKPGDRGPKGERGDQGIPGDRGPQGERGKPGLTGMKGAIGPVGPAGSKGSTGPPGHQGPPGNPGIPGTPADAVSFEEIKHYINQEVLRIFEERMAVFLSQLKLPAAMLSAQAHGRPGPPGKDGLPGPPGDPGPQGYRGQKGERGEPGIGLPGSPGLPGSSAVGLPGSPGAPGPQGPPGPSGRCNPEDCLYPAPPPHQQAGGK

Annotated regions:
phrase: NKSELSGFDLGESFALRHAFCEGDKTCFKLGSVLLIRDTVKIFPKGLPEEYAIAVMFRVRRSTKKERWFLWKILNQQNMAQISVVIDGTKKVVEFMFRGAEGDLLNYVFKNRELRPLFDRQWHKLGIGVQSRVLSLYMDCNLIASRHTEEKNSVDFQGRTIIAARASDGKPVDIELHQLRIYCN
type: DOMAIN
name: TSPN-like_N
description: Thrombospondin-like, N-terminal domain

phrase: GDMGPPGPPALTGSIGIQGPQGPPGKEGQRGRRGKTGPPGNPGPPGPPGPPGLQ
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: GDRGPKGERGDQGIPGDRGPQGERGKPGLTGMKGAIGPVGPAGSKGSTGPPGHQGPPG
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: GIPGRTGSQGPAGEPGIQGPRGLPGLPGTPGMPGNDGAPGKDGKPGLPGPPGD
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: GYPGPPGPPGPKGDPGPVGEPGAMGLPGLEGFPGVKGDRGPAGPPGIAGISGKPGAPG
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: GQQGPAGSMGPRGPPGDVGLPGEHGIPGKQGVKGEKGDPGGRLGPPGLPGLKGDAGPP
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: GLPGTLRSIGHKGDKGEPGEHGLDGTPGLPGQKGEQGLEGIKGEIGEKGEPGAK
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: GEQGLEGIKGEIGEKGEPGAKGDSGLDGLNGQDGLKGDSGPQGPPGPKGDKGDMGPPG
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: KGDEGLQGIPGLSGAPGPTGPPGLTGRTGHPGPTGAKGDKGSEGPPGKPGPPGPP
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: GPPGLPGLKGDAGPPGISLPGKPGLDGNPGSPGPRGPKGERGLPGLHGSPGDTGPP
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: GKPGAPGPPGVPGEQGERGPIGDTGFPGPEGPSGKPGINGKDGLPGAQGIMGKPGDR
type: REPEAT
name: Collagen
description: Collagen triple helix repeat

phrase: GEHGASGPKGEKGDTGLPGFPGSVGPKGHKGEPGEPLTKGEKGDRGEPGLLGPQ
type: REPEAT
name: Collagen
description: Collagen triple helix repeat
Protein sequence:
MKILVLNAGSSSQKSCLYEIQSEPSSQPPSPLWEGKVDWTHEQGYAEIEVKTSTGACLQEKIAADSRPIVISHLLATLWQGDTQVIDQPNEIAVVGHRVVHGGAEYRKSVFITAEVKAAIARLASFAPVHNPANLEGIEAVETLFGNIPQVAVFDTAFHAHLPLAAAIYPGPYEWYEQGIRRYGFHGISHRYCAERAAQLLDRDLSSLRLITCHLGNGCSLAAIQNGISIETTMGFTPMEGLMMGSRSGSIDPGILIHLLRHQGYSADKLDQVLNKQSGLLGVSGISADLRRIDQAIAAGNDRAKLALEIYIHRLQSAIGACLPHLGGLDALIFTAGVGENSATVRAATCAGFEYLNWQIDQDQNQPSAQDRDIATPDSAVRILVIHTQEDWAIAQDCWQLIQTNSQS

Annotated regions:
phrase: LITCHLGNGCSLAAIQN
type: CONSERVED_SITE
name: Aliphatic_acid_kinase_CS
description: Aliphatic acid kinase, short-chain, conserved site

phrase: ILVLNAGSSSQ
type: CONSERVED_SITE
name: Aliphatic_acid_kinase_CS
description: Aliphatic acid kinase, short-chain, conserved site
Protein sequence:
MGGMTIAEKILATHAGKEEVKPGEIVLAKVDFMFGNDVTTPLAIKTFRKIGVEKVFDPERIAIVLDHFTPNKDIKAAEQCKFSREFAREQGIKWFFEGGNVGVEHCLLPELGLVLPGELIIGADSHTCTYGALGAFATGVGSTDLAVAMATGEAWFRVPETIKFVYEGDLQPWVTSKDLILYTIGDIGVNGALYKVMEFSGEVIEKLSVEQRMTMTNMAIEAGAKTGIIEPDKKTIEYVKGRAKREYKIYKSDEDAKYYKVIEYDVSKIEPQVAFPHLPENTVPISKAAKMNIKIDQVVIGSCTNGRLEDLRMAAEVLEGQKVAPWVRLIILPCSPTVYFKAMKEGLLEIFLEAGAVIGPPTCGPCLGGHMGILASGERAVSTTNRNFVGRMGHPKSEVYLASPYVAAASAILGRIASPEEVVK

Annotated regions:
phrase: EKILATHAGKEEVKPGEIVLAKVDFMFGNDVTTPLAIKTFRKIGVEKVFDPERIAIVLDHFTPNKDIKAAEQCKFSREFAREQGIKWFFEGGNVGVEHCLLPELGLVLPGELIIGADSHTCTYGALGAFATGVGSTDLAVAMATGEAWFRVPETIKFVYEGDLQPWVTSKDLILYTIGDIGVNGALYKVMEFSGEVIEKLSVEQRMTMTNMAIEAGAKTGIIEPDKKTIEYVKGRAKREYKIYKSDEDAKYYKVIEYDVSKIEPQVAFPHLPENTVPISKAAKMNIKIDQVVIGSCTNGRLEDLRMAAEVLEGQKVAPWVRLIILPCSPTVYFKAMKEGLLEIFLEAGAVIGPPTCGPCLGGHMGILASGERAVSTTNRNFVGRMGHPKSEVYLASPYVAAASAIL
type: DOMAIN
name: Acoase/IPM_deHydtase_lsu_aba
description: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain

phrase: GAVIGPPTCGPCL
type: BINDING_SITE
name: Aconitase_4Fe-4S_BS
description: Aconitase family, 4Fe-4S cluster binding site

phrase: LPGELIIGADSHT
type: DOMAIN
name: Acoase/IPM_deHydtase_lsu_aba
description: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain

phrase: TYGALGAFATGVGST
type: DOMAIN
name: Acoase/IPM_deHydtase_lsu_aba
description: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain

phrase: GALYKVMEFSGEV
type: DOMAIN
name: Acoase/IPM_deHydtase_lsu_aba
description: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain

phrase: VIGSCTNGRLE
type: DOMAIN
name: Acoase/IPM_deHydtase_lsu_aba
description: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain

phrase: GAVIGPPTCGPCL
type: DOMAIN
name: Acoase/IPM_deHydtase_lsu_aba
description: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain

phrase: IDQVVIGSCTNGRLED
type: BINDING_SITE
name: Aconitase_4Fe-4S_BS
description: Aconitase family, 4Fe-4S cluster binding site

phrase: NDVTTPLAIKTFRKIGVEKVFDPERIAIVLDHFTPNKDIKAAEQCKFSREFAREQGIKWFFEGGNVGVEHCLLPELGLVLPGELIIGADSHTCTYGALGAFATGVGSTDLAVAMATGEAWFRVPETIKFVYEGDLQPWVTSKDLILYTIGDIGVNGALYKVMEFSGEVIEKLSVEQRMTMTNMAIEAGAKTGIIEPDKKTIEYVKGRAKREYKIYKSDEDAKYYKVIEYDVSKIEPQVAFPHLPENTVPISKAAKMNIKIDQVVIGSCTNGRLEDLRMAAEVLEGQKVAPWVRLIILPCSPTVYFKAMKEGLLEIFLEAGAVIGPPTCGPCLGGHMGILASGERAVSTTNRNFVGRMGHPKSEVYLASPYVAAASAILGR
type: DOMAIN
name: IPMI_cat
description: 3-Isopropylmalate dehydratase, catalytic domain
Protein sequence:
MALQQEIIQALGVKPQIDAHEEIRRSVDFLKSYLKTYPFLKTLVLGISGGQDSTLAGKLSQLAISELRDETGDQSYQFIAVRLPFGVQFDEKDCQDALAFIQPDKVLTVNIKEAVLASEKALREAGIELSDFVRGNEKARERMKAQYSIAGMTKGVVVGTDHAAEAVTGFFTKYGDGGTDINPLFRLNKRQGKLLLKTLGCPEHLYLKVPTADLEDDRPSLPDEVALGVTYDNIDDYLEGKQIDEKISQIIDGWYVKTEHKRRPPITIFDDFWKQ

Annotated regions:
phrase: IRRSVDFLKSYLKTYPFLKTLVLGISGGQDSTLAGKLSQLAISELRDETGDQSYQFIAVRLPFGVQFDEKDCQDALAFIQPDKVLTVNIKEAVLASEKALREAGIELSDFVRGNEKARERMKAQYSIAGMTKGVVVGTDHAAEAVTGFFTKYGDGGTDINPLFRLNKRQGKLLLKTLGCPEHLYLKVPTADLEDDRPSLPDEVALGVTYDNIDDYLEGKQIDEKISQIIDGWYVKTEHKRRP
type: DOMAIN
name: NAD/GMP_synthase
description: NAD/GMP synthase
Protein sequence:
MRILFAAAECAPMIKVGGMGDVVGSLPPALKKLGHDVRLIIPGYGKLWTLMDIAPEPIFRSNTMGVDFSVFETKHPSNGLPIYLVGHPCFDSERIYGGEDEDWRFTFFASAVSEFAWNSWKPQVLHCHDWHTGMIPVWMHQDPEISTVFTIHNLKYQGPWRWKLDQITWCPWYMHGDHTMASAMLYADRVNAVSPTYSREIRTSEYGEKLEGLLNYISGKLRGILNGVDLDEWNPATDNSLPAKFSVDNISGRAINKRVLQERMGLEVNPDKYLMGMVGRLVDQKGIDLLLQVANRLLSYTDSQVVVLGTGDRYLESSLWQLAIEYPGRFSVFLTYDDALSRLIYGGADAFLMPSRFEPCGISQLLAMRYGAIPIVRKVGGLVDTVEPYNPMNETGSGFCFDRYEPIDFYTSLVRSWEAYRHQKSWKELQLRAMSNKYSWDRSAKEYELMYKDVCGIKEPSPDAAEVEKFSYGQEADPSRKGKKIKL

Annotated regions:
phrase: LEVNPDKYLMGMVGRLVDQKGIDLLLQVANRLLSYTDSQVVVLGTGDRYLESSLWQLAIEYPGRFSVFLTYDDALSRLIYGGADAFLMPSRFEPCGISQLLAMRYGAIPIVRKVGGLVDTVEPYNPMNETGSGFCFDRYEPID
type: DOMAIN
name: Glyco_trans_1
description: Glycosyl transferase, family 1

phrase: RILFAAAECAPMIKVGGMGDVVGSLPPALKKLGHDVRLIIPGYGKLWTLMDIAPEPIFRSNTMGVDFSVFETKHPSNGLPIYLVGHPCFDSERIYGGEDEDWRFTFFASAVSEFAWNSWKPQVLHCHDWHTGMIPVWMHQDPEISTVFTIHNLKYQGPWRWKLDQITWCPWYMHGDHTMASAMLYADRVNAVSPTYSREIRTSEYGEKLEGLL
type: DOMAIN
name: Starch_synth_cat_dom
description: Starch synthase, catalytic domain
Protein sequence:
MECALDAQSLISISLRKIHSSRTQRGGIKLHKNLLVSYVLRNARQLYLSERYAELYRRQQQQQQQQQQPPHHQHQHLAYAAPGMPASAADFGPLQLGGGGDAEAREPVARHQLHQLHQLHQLHLQQQLHQHQHPAPRGCTAAAPVAVAGAPAGCAGALSELPGCAALQPPHGAPHRGQHLEPLQPGPAPLPPPAPAALCPRDPRVPAACSAPSAPPGAAPPTVAASSPPASPAPSSSPGFYRGAYPAPSDFGVHCSSQTTVLDLDTHVVTTVENGYLHQDCCASAHCPCCGQGAPGPGLASAAGCKRKYYPGQEEEDDEEEDAGDLGAEPPGGTPFAPCKRARFEDFCPDSSPDASNISNLISIFGSGFSGLVSRQPDSSEQPPPLNGQLCAKQALASLGAWTRAIVAF

Annotated regions:
Protein sequence:
MSQTNLLLLCGGGGDEHAISLLSANFFETSLADITGFNVLRVELDADGHYHTKDGDICELTNRKQIRFEDESKRPWPVDYVIPCIHGYPGETGDIQSYFELINLPYFGCDSEASRNCFNKVTAKMWFSALGIPNTPYIFLNEFNDDAISQTEQALETWGSVFIKAASQGSSVGCYRVDSIDELASSLKEAFSYSPYVVVEKTIHARELEVAAYELDGEIVATKPGEIICASNTFYTFDEKYAADSQAETKVEADISDELSREIREYAVKVFKGMKLSHLSRIDFFLTDENEILLNEINTFPGLTPISMFPKMLQNHGDDFTEYLYSNIKSQLI

Annotated regions:
phrase: MKLSHLSRIDFFLTDENEILLNEINTFP
type: CONSERVED_SITE
name: D-Ala_lig_Van_CS
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site

phrase: KMWFSALGIPNTPYIFLNEFNDDAISQTEQALETWGSVFIKAASQGSSVGCYRVDSIDELASSLKEAFSYSPYVVVEKTIHARELEVAAYELDGEIVATKPGEIICASNTFYTFDEKYAADSQAETKVEADISDELSREIREYAVKVFKGMKLSHLSRIDFFLTDENEILLNEINTFPGLTPISMFPKMLQNHGDDFTEYLYSNI
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold

phrase: LLLLCGGGGDEHAISLLSANFFETSLADITGFNVLRVELDADGHYHTKDGDICELTNRKQIRFEDESKRPWPVDYVIPCIHGYPGETGDIQSYFELINLPYFG
type: DOMAIN
name: Dala_Dala_lig_N
description: D-alanine--D-alanine ligase, N-terminal domain

phrase: HGYPGETGDIQ
type: CONSERVED_SITE
name: D-Ala_lig_Van_CS
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site

phrase: SALGIPNTPYIFLNEFNDDAISQTEQALETWGSVFIKAASQGSSVGCYRVDSIDELASSLKEAFSYSPYVVVEKTIHARELEVAAYELDGEIVATKPGEIICASNTFYTFDEKYAADSQAETKVEADISDELSREIREYAVKVFKGMKLSHLSRIDFFLTDENEILLNEINTFPGLTPISMFPKMLQNHGDDFT
type: DOMAIN
name: Dala_Dala_lig_C
description: D-alanine--D-alanine ligase, C-terminal
Protein sequence:
METVVRRCPFLSRVPQAFLQKAGKSLLFYAQNCPKMMEIGAKPAPRALSTSAVLCQQVTETPPANEKDKAAKAEVQQAPDGSQQAPDGSQQTADGTQLPSGHPSLASSQGTGSKCPFLAAEMSQGGSSVFRKASLALQEDVQEMHAVREEVAQTSVNPSVINVKTEGGELNGLLKNFQDIMRKQRPERVSHLLQDNLPKSVCTFQYDRFFEKKIDEKKNDHSYRVFKTVNRKAQCFPMADDYSDSLISKKQVSVWCSNDYLGMSRHPRVCGAVIDTLKQHGTGAGGTRNISGTSKFHVDLEQELADLHGKDAALLFSSCFVANDSTLFTLAKMMPGCEIYSDAGNHASMIQGIRNSGVPKYIFRHNDVSHLRELLQRSDPAVPKIVAFETVHSMDGAVCPLEELCDVAHEFGAITFVDEVHAVGLYGLQGGGIGDRDGVMPKMDIISGTLGKAIGCVGGYIASTSSLIDTVRSYAAGFIFTTSLPPMLLAGALESVRILRSTEGRTLRRQHQRNVKLMRQMLMDAGLPVVHCPSHIIPVRVADAAKNTEVCDELMTRHNIYVQAINYPTVPRGEELLRIAPTPHHTPQMMSYFVDNLLATWKRVGLELKPHSSAECNFCRRPLHFEMMSEREKSYFSGMSKLVSAQA

Annotated regions:
phrase: FQYDRFFEKKIDEKKNDHSYRVFKTVNRKAQCFPMADDYSDSLISKKQVSVWCSNDYLGMSRHPRVCGAVIDTLKQHGTGAGGTRNISGTSKFHVDLEQELADLHGKDAALLFSSCFVANDSTLFTLAKMMPGCEIYSDAGNHASMIQGIRNSGVPKYIFRHNDVSHLRELLQRSDPAVPKIVAFETVHSMDGAVCPLEELCDVAHEFGAITFVDEVHAVGLYGLQGGGIGDRDGVMPKMDIISGTLGKAIGCVGGYIASTSSLIDTVRSYAAGFIFTTSLPPMLLAGALESVRILRSTEGRTLRRQHQRNVKLMRQMLMDAGLPVVHCPSHIIPVRVADAAKNTEVCDELMTRHNIYVQAINYPTVPRGEELLRIAPTPHHTPQMMSYFVDNLLATWKRVGLE
type: DOMAIN
name: 4pyrrol_synth_NH2levulA_synth
description: Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase

phrase: SVWCSNDYLGMSRHPRVCGAVIDTLKQHGTGAGGTRNISGTSKFHVDLEQELADLHGKDAALLFSSCFVANDSTLFTLAKMMPGCEIYSDAGNHASMIQGIRNSGVPKYIFRHNDVSHLRELLQRSDPAVPKIVAFETVHSMDGAVCPLEELCDVAHEFGAITFVDEVHAVGLYGLQGGGIGDRDGVMPKMDIISGTLGKAIGCVGGYIASTSSLIDTVRSYAAGFIFTTSLPPMLLAGALESVRILRSTEGRTLRRQHQRNVKLMRQMLMDAGLPVVHCPSHIIPVRVADAAKNTEVCDELMTRHNIYVQAINYPTVPRGEELLRIAPTPHHTPQMMSYFVD
type: DOMAIN
name: Aminotransferase_I/II_large
description: Aminotransferase, class I/classII, large domain

phrase: TLGKAIGCV
type: BINDING_SITE
name: Aminotrans_II_pyridoxalP_BS
description: Aminotransferase, class-II, pyridoxal-phosphate binding site

phrase: ETVVRRCPFLSRVPQAFLQKAGKSLLFYAQNCPKMMEIGAKPAPRALSTSAVLCQQVTETPPANEKDKAAKAEVQQAPDGSQQAPDGSQQTADGTQLPSGHPSLASSQGTGSKCPFLAAEMSQGGSSVFRKASLALQEDVQEM
type: DOMAIN
name: 5aminolev_synth_preseq
description: 5-aminolevulinate synthase presequence
Protein sequence:
MLQYPQIDPVALRIGPLAIHWYGLMYLIGFALVYAFGRRRITSGHTTSMTVRDLEDLIFYSVLGVVLGGRLGYVLFYKPAHYLANPLEIFYLWEGGMSFHGGLIGVIVVMLLFAHKKRLGFFTVSDFIAPLIPLGLAAGRLGNFINGELWGRPTDVPWAMIFPQSGDGLPRHPSQLYELGLEGIVLFALLWWYSSKPRAAGQVSAMFLMGYGAFRFLVEFTREPDNFLGLLAAGLSMGQWLSIPMVLAGAGLYLFTARPPSR

Annotated regions:
Protein sequence:
MANTSLRQPQKGYRGRGGKKAYHGGRGGARTFAATTGGRAEATSSDEKWERVRLAHDIDESMGFARYDAGRRREGWLVNVQPTSIEDDRVPGGGGRAAIDCYFIEEDGGTFKATVAYDPYFLIAARKGRESDVEEWCKRVPGGGVVKSVRRVEKEDLKMPNHLLGYRRTFLELRFHNVQDLLAARKDIFPIAEKNKKNMDAMDTYAEVAATNGDFDLFDDSREHDKRLNVSFADSSDFIVDIREYDVPYHVRVMIDMDIRVAKWYWVEAKHGVTTVVCNEEHLPMADPVVMAYDIETAKAPLKFPDPTVDQIMMISYMIDGQGFLITNREIISEDIADFEYTPKPEYPGPFMIFNEPDEKGLIERFFLHIKEARPTVIATYNGDFFDWPYVDARASFNGIDMYREIGWRKDTEDQYKCNYSVHMDCFHWVNRDSYLPQGSRGLKAVTVAKLGYDPDELDPELMTPYASERPQTLAEYSVSDAVATYYLYMKYVHPFVFSLCTILPLGPDDTERKGTGTLCEMLLMVQAYQKGIVLPNKHVSAKESFWDGHLLDSETYVGGHVESIEAGVFRADIPVNFAVDASACEELIRDLDAALKFSITVEEKKPMDDVTNYEEVKEQIKAKLEALRETPNRLERPLIYHLDVASMYPNIMTTNRLQPDSMVSESDCAACDFNRPGKTCDRRLPWSWRGEYLPAKRDEYNMIRHALENEKFPGKYPNSPMRTFQELPADEQATLTRKRLQIYSQKVYHKIHDSTIIEREAIICQRE

Annotated regions:
phrase: VDIREYDVPYHVRVMIDMDIRVAKWYWVEAKHGVTTVVCNEEHLPMADPVVMAYDIETAKAPLKFPDPTVDQIMMISYMIDGQGFLITNREIISEDIADFEYTPKPEYPGPFMIFNEPDEKGLIERFFLHIKEARPTVIATYNGDFFDWPYVDARASFNGIDMYREIGWRKDTEDQYKCNYSVHMDCFHWVNRDSYLPQGSRGLKA
type: DOMAIN
name: DNA-dir_DNA_pol_B_exonuc
description: DNA-directed DNA polymerase, family B, exonuclease domain