nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MKKRFPTLLATLIWTALYSQHTLADLAEQCMLGVPTYDQPLVTGDPNQLPVRINADKTEANYPDNALFTGNVIVQQGNSTLTANQVELTQVQKPGEAIPVRTVTATGDVNYDDPQIKLKGPKGWSNLNTKDTDMDKGKYQMVGRQGRGDADLMKLRGQNRYTILENGTFTSCLPGDNSWSVVGSEVIHDREEQVAEIWNARFKIGKVPVFYSPYMQLPVGDKRRSGFLIPNAKYTSNNGLEFMLPYYWNIAPNFDATITPHYMERRGLQWQNEFRYLLAPGSGTMALDWLPSDRLYHGTDGTEKDPTRWLYYWGHSGVMDKVWRFNVNYTRVSDPDYFTDLTSQYGSTTDGYATQIFSVGYADQNWDATLASKQFQVFTTGGNNNAYRAQPQLDMNYYKNDIGPFDLHIYGQAAKFTSVNPENPEAERFHIEPSINLPLANGWGSLNTEAKLLATHYQQDIPNGFASNYKNQNGQDATVPNLKDSVNRVIPQFKVDGKVVFDRPMDWSEGFTQTLEPRVQYLYVPYRNQDDIYIYDTTLMQSDYSGLFRDRTYSGLDRIASANQVSTGLTSRIYDDELVERFNVSVGQIYYFSRSRTGNSETIDNSDDTGSLVWAGDTFWRINDQLGLKGGAQYDTRLGSLTLGNAVMEYRKDAERMIQLNYRYASPEYIQAAVPNVKSPGYQQGISQIGTTASWPIADRWALVGAYYYDTKANQPASQLVGVQYNTCCWAINLGYERKITGWNNQNETSKYDNKVSFNIELRGLSSDHSLGTAQMLGSGILPYQSAF

Annotated regions:
phrase: INADKTEANYPDNALFTGNVIVQQGNSTLTANQVELTQVQKPGEAIPVRTVTATGDVNYDDPQIKLKGPKGWSNLNTKDTDMDKGKYQMVGRQGRGDADLMKLRGQNRYTILENGTFTSCLPGDNSWSVVGSEVIHDREE
type: DOMAIN
name: OstA-like_N
description: Organic solvent tolerance-like, N-terminal

phrase: TRWLYYWGHSGVMDKVWRFNVNYTRVSDPDYFTDLTSQYGSTTDGYATQIFSVGYADQNWDATLASKQFQVFTTGGNNNAYRAQPQLDMNYYKNDIGPFDLHIYGQAAKFTSVNPENPEAERFHIEPSINLPLANGWGSLNTEAKLLATHYQQDIPNGFASNYKNQNGQDATVPNLKDSVNRVIPQFKVDGKVVFDRPMDWSEGFTQTLEPRVQYLYVPYRNQDDIYIYDTTLMQSDYSGLFRDRTYSGLDRIASANQVSTGLTSRIYDDELVERFNVSVGQIYYFSRSRTGNSETIDNSDDTGSLVWAGDTFWRINDQLGLKGGAQYDTRLGSLTLGNAVMEYRKDAERMIQLNYRYASPEYIQAAVPNVKSPGYQQGISQIGTTASWPIADR
type: DOMAIN
name: LptD_C
description: LptD, C-terminal
Protein sequence:
MMGNFNVMQVFTCLESIRSKINFPKGTIWKMNTASNQNLSALIHGFPVNNIHGMLNREISSVVFDSRKVEAGSLFIAVHGFQQDGFKFINDAIARGASAFVTEASIADLKNLKLDENNITAICVDDCRSALAWIGSQFYHRPSDRMDVYGVTGTNGKTTVTYILDAIHKVRKATSGIIGTIHYSYGDADITAPMTTPESLDINRMLHEMTVRKIRRCFLEVSSHSLALKRVYGMRFAVGIFTNLTRDHLDFHDTIDVYKETKKGFFRDNFVEKIVTNIDDPVGREIAKEFFGDMLTTGIEQNADVMAENCLSSETGSCFTLKTPSGSCEIQTRLLGRHNIYNLISAASAALLQGIPLEEIKAGLQSIDNIPGRFERVPCDQDFSVVVDYAHTDDALRNVLQSAQAFTPGRIITVFGCGGNRDRGKRKAMGGVAVEASGFAIVTSDNPRSEDPQRIVDDILEGIPSSAKQGKDYEVIVDRKEAIGFAIEQARPGDLVMIAGKGHEDYQILNTGKIHFDDREVAAEAIRRLS

Annotated regions:
phrase: EISSVVFDSRKVEAGSLFIAVHGFQQDGFKFINDAIARGASAFVTEASIADLKNLKLDENNITAICVDDCRSALAWIGSQF
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: VTGTNGKTTVTYILDAIHKVRKATSGIIGTIHYSYGDADITAPMTTPESLDINRMLHEMTVRKIRRCFLEVSSHSLALKRVYGMRFAVGIFTNLTRDHLDFHDTIDVYKETKKGFFRDNFVEKIVTNIDDPVGREIAKEFFGDMLTTGIEQNADVMAENCLSSETGSCFTLKTPSGSCEIQTRLLGRHNIYNLISAAS
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRFERVPCDQDFSVVVDYAHTDDALRNVLQSAQAFTPGRIITVFGCGGNRDRGKRKAMGGVAVEASGFAIVTSDNPRSEDPQRIVDDILEGIPSSAKQGKDYEVIVDRKEAIGFAIEQARPGDLVMIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MASMSTVFPKPTSFISQPLTKSHKSDSVTTSISFPSNSKTRSLRTISVRAGLIEPDGGKLVDLVVPEPRRREKKHEAADLPRVRLTAIDLQWMHVLSEGWASPLRGFMRESEFLQTLHFNLLNLDDGSVVNMSVPIVLAIDDQQKALIGESKRVSLVDSDDNPIAILNDIEIYKHPKEERIARTWGTTAPGLPYVEEAITNAGDWLIGGDLEVLEPVKYNDGLDRFRLSPFELRKELEKRGADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYKNPILLLHPLGGFTKADDVPLSWRMKQHEKVLEDGVLDPETTVVSIFPSPMLYAGPTEVQWHAKARINAGANFYIVGRDPAGMGHPVEKRDLYDADHGKKVLSMAPGLERLNILPFRVAAYDKTQGKMAFFDPSRAQDFLFISGTKMRALAKNRENPPDGFMCPGGWKVLVDYYDSLTLTGNTKLPEKIPV

Annotated regions:
phrase: IEPDGGKLVDLVVPEPRRREKKHEAADLPRVRLTAIDLQWMHVLSEGWASPLRGFMRESEFLQTLHFNLLNLDDGSVVNMSVPIVLAIDDQQKALIGESKRVSLVDSDDNPIAILNDIEIYKHPKEERIARTWGTTAPGLPYVEEAITNAGDWLIGGDLEVL
type: DOMAIN
name: ATP-Sase_PUA-like_dom
description: ATP-sulfurylase PUA-like domain

phrase: RFRLSPFELRKELEKRGADAVFAFQLRNPVHNGHALLMTDTRRRLLEMGYKNPILLLHPLGGFTKADDVPLSWRMKQHEKVLEDGVLDPETTVVSIFPSPMLYAGPTEVQWHAKARINAGANFYIVGRDPAGMGHPVEKRDLYDADHGKKVLSMAPGLERLNILPFRVAAYDKTQGKMAFFDPSRAQDFLFISGTKMRALAKNRENPPDGFMCPGGWKVLV
type: DOMAIN
name: Sulfurylase_cat_dom
description: Sulphate adenylyltransferase catalytic domain
Protein sequence:
MKIIFVFALLAIVACNASARFDPLSQSYRQYQLQSHLLLQQQVLSPCSEFVRQQYSIVATPFWQPATFQLINNQVMQQQCCQQLRLVAQQSHYQAISIVQAIVQQLQLQQFSGVYFDQTQAQAQTLLTFNLPSICGIYPNYYSAPRSIATVGGVWY

Annotated regions:
phrase: CSEFVRQQYSIVATPFWQPATFQLINNQVMQQQCCQQLRLVAQQSHYQAISIVQAIVQQLQLQQFSGVYFDQTQAQAQTLLTFNLPSICGIYPNY
type: DOMAIN
name: Bifunc_inhib/LTP/seed_store
description: Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain

phrase: QLQSHLLLQQQVLSPCSEFVRQQYSIVATPFWQPATFQLINNQVMQQQCCQQLRLVAQQSHYQAISIVQAIV
type: DOMAIN
name: Bifunc_inhib/LTP/seed_store
description: Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain
Protein sequence:
MGKKQVCPPRALPPVPSFCSADDIPLSRPKKRKPKGKTPLDDIVQATVRRQSESSEPLTPEPQDVPPQRKRKKKKVPPDSETSFTQQNTASLFQNGNGVDVPEAEETVVRKQRKRTKKARPAETHSSNELEVEEDDIIEDEHRRSPDQQPVFAAPTGISQPVSKVFVEKNRRFQAADRAELIKTTENINVLLDVKSSWTTRDVALSVHRSFRVIGLFTHGFLAGYAVWNIVVIYILAGNQLTTVSNLLQQYKMLAYPAQSLFYLLLSISTVSAFDRIDLAKASVALRGFLTLDPAALASFLYFTALILSLSQQMTCDRINLYTPPSENGSIWTAGMEEEILQPWIVVNLVVSILVGASWIFLSYRPELDHSEELMFHTEIEEFPQDEREMLKSQ

Annotated regions:
Protein sequence:
MDIKGGRRGNVEDSLNKLSLSPPDNNSSFLSNHFQVRKSYSQAPARTLKPFASEDIKILLLENVNQSALSNLKDEGYQVEFLKTSMSEDDLVEKIKGVHAIGIRSKTRLTRRVLEAADSLIVIGCFCIGTNQVDLDFAAERGIAVFNSPYANSRSVAELVIGYIISLARQVGDRSLELHRGEWNKVSSGCWEIRGKTLGIIGYGHIGSQLSVLAEAMGLHVVYYDILPIMPLGSAKQLSSLPELLHRADFVSLHVPASPETKNMISSKEFAAMKEGSYLINASRGTVVDIPALVDASKSGKIAGAAIDVYPSEPAGNGKDKFVDSLNSWTSELTHCKNIILTPHIGGSTEEAQYNIGIEVSEALTRYINEGNSIGAVNFPEVSLRSLTEADRNAARVLFVHRNVPGVLRQVNELFIDHNIKSQFSDSRGDIAYLVADISDCTPGSLEALHQKLESLPCKINTRLLY

Annotated regions:
phrase: LGIIGYGHIGSQLSVLAEAMGLHVVYY
type: CONSERVED_SITE
name: D-isomer_DH_CS1
description: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1

phrase: RVLFVHRNVPGVLRQVNELFIDHNIKSQFSDSRGDIAYLVADISDCTPGSLEALHQKLESLPCKINTRLL
type: DOMAIN
name: ACT_dom
description: ACT domain

phrase: ILLLENVNQSALSNLKDEGYQVEFLKTSMSEDDLVEKIKGVHAIGIRSKTRLTRRVLEAADSLIVIGCFCIGTNQVDLDFAAERGIAVFNSPYANSRSVAELVIGYIISLARQVGDRSLELHRGEWNKVSSGCWEIRGKTLGIIGYGHIGSQLSVLAEAMGLHVVYYDILPIMPLGSAKQLSSLPELLHRADFVSLHVPASPETKNMISSKEFAAMKEGSYLINASRGTVVDIPALVDASKSGKIAGAAIDVYPSEPAGNGKDKFVDSLNSWTSELTHCKNIILTPHIGGSTEEAQYNIGIEVSEALTRYINEGNSIGAV
type: DOMAIN
name: D-isomer_2_OHA_DH_cat_dom
description: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain

phrase: GYIISLARQVGDRSLELHRGEWNKVSSGCWEIRGKTLGIIGYGHIGSQLSVLAEAMGLHVVYYDILPIMPLGSAKQLSSLPELLHRADFVSLHVPASPETKNMISSKEFAAMKEGSYLINASRGTVVDIPALVDASKSGKIAGAAIDVYPSEPAGNGKDKFVDSLNSWTSELTHCKNIILTPHI
type: DOMAIN
name: D-isomer_DH_NAD-bd
description: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain

phrase: LLHRADFVSLHVPASPETKNMI
type: CONSERVED_SITE
name: D-isomer_DH_CS
description: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site

phrase: MKEGSYLINASRGTVV
type: CONSERVED_SITE
name: D-isomer_DH_CS
description: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site
Protein sequence:
MTSEVIKFPQFPEFTIHISLFINVSSENITTIKSNLISATDNDHNKYDYCFLNTKYIISKEHLFQSIYKSLLNYTSKLGLSTRNLKSEIIYNLSPINNVGDALKRFGISEDCPNCIVIKIINNNNKENSEETKISEKVTTDLKEIIDGELIELNDQYIFENFIDLAKFRKLYKLNDVVDLNKEDNLQGRLTRLAIGACILRGY

Annotated regions:
Protein sequence:
MRDSRETFVNHAFVTGYPIKHSRSPLIHGYWLKQFGIAGSYRAHEVTPEAFPEFMGQLRDGGTGFCGGNVTIPHKEMAFELSDRPDELSAELGAANTLWLEDGRICATNTDGRGFVANLDERASGWDRISTAVILGAGGASRAVIQAVRDRGVKTIHVVNRTAARAQELADRFGRAVHAHPIAALSEVMAGAGLFVNTTSLGMDGEPAPAIDFSPLANGAVVTDIVYVPLKTPLLRQAEEQGYRIVDGLGMLLHQAAPGFEKWFGLRPVVDETLRQIIIKDMDVHA

Annotated regions:
phrase: VTGYPIKHSRSPLIHGYWLKQFGIAGSYRAHEVTPEAFPEFMGQLRDGGTGFCGGNVTIPHKEMAFELSDRPDELSAELGAANT
type: DOMAIN
name: Shikimate_DH-bd_N
description: Shikimate dehydrogenase substrate binding, N-terminal

phrase: STAVILGAGGASRAVIQAVRDRGVKTIHVVNRTAARAQELADRFGRAVHAHPIAALSEVMAGAGLFVNT
type: DOMAIN
name: Shikm_DH/Glu-tRNA_Rdtase
description: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase

phrase: GLGMLLHQAAPGFEKWFGLR
type: DOMAIN
name: SDH_C
description: SDH, C-terminal
Protein sequence:
MAKPVVETPLMRQYFQIKQKHPDAILLFRVGDFYETFSEDAIVASEILGITLTRRANGAAQFVELAGFPHHALDTYLPKLVRAGKRVAICDQLEDPKKTKTLVKRGITELVTPGVSTNDNVLSHKENNFLAAVSCGKEVFGISLLDISTGEFMAGQGNADYVEKLLTNYRPKEILVERSERSRFNDLFHWSGFIFDMEDWAFSSENNRLRVLKHFDLKSLKGFGLEELSMAVTAAGAVLNYLDLTQHHQLQHITSLSRLDENRYVRLDKFTVRSLELLSPMNEGGKSLLDIIDHTITPMGARRIRQWIVFPLKDPARIQARQRVVEFFFRHPEERAIIAEHLTEIGDLERLVTKGAMGRISPREMVQLRVALQALEPIKEVCTHADEENLRTLGGKLELCKELRDKILREVMPDAPAALGRGPVIAHGVDATLDELRALAYSGKDYLIKLQQQEIERTGIPSLKVAYNNVFGYYIEVRNTHKDKVPAEWIRKQTLVSAERYITEELKEYEAKILGAEEKIAALEGQLYALLVAELQRYVAPLQQDSQAVASLDCLLSFAESARRYRFICPVVDESFTIDIKAGRHPVIEQQLPADEPYIANDIYLDTDRQQVIIVTGPNMSGKSALLRQTALISLMAQIGSFVPAESARIGMVDSIFTRVGASDNISMGESTFMVEMQEASNILNNLTPRSLVLFDELGRGTSTYDGISIAWSIVEYIHDNPKAHPRTLFATHYHELNELEGQLDRVHNFNVSAREVDGKMLFLRKLEPGGSAHSFGIQVARLGGMPHHIVQRATDILHRLEQEREKIEEEEPKTKDTKRGPSEKVKNASPTLPRDEKGRSIDGYQLSFFQLDDPVLSQIREEILDLNIDNLTPLEALNKLNDIKRILRGY

Annotated regions:
phrase: EGGKSLLDIIDHTITPMGARRIRQWIVFPLKDPARIQARQRVVEFFFRHPEERAIIAEHLTEIGDLERLVTKGAMGRISPREMVQLRVALQALEPIKEVCTHADEENLRTLGGKLELCKELRDKILREVMPDAPAALGRGPVIAHGVDATLDELRALAYSGKDYLIKLQQQEIERTGIPSLKVAYNNVFGYYIEVRNTHKDKVPAEWIRKQTLVSAERYITEELKEYEAKILGAEEKIAALEGQLYALLVAELQRYVAPLQQDSQAVASLDCLLSFAESARRYRFICPVVDESFTIDIKAGRHPVIEQ
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: NFLAAVSCGKEVFGISLLDISTGEFMAGQGNADYVEKLLTNYRPKEILVERSERSRFNDLFHWSGFIFDMEDWAFSSENNRLRVLKHFDLKSLKGFGLEELSMAVTAAGAVLNYLDLTQHHQLQH
type: DOMAIN
name: DNA_mmatch_repair_MutS_con_dom
description: DNA mismatch repair protein MutS, connector domain

phrase: QQVIIVTGPNMSGKSALLRQTALISLMAQIGSFVPAESARIGMVDSIFTRVGASDNISMGESTFMVEMQEASNILNNLTPRSLVLFDELGRGTSTYDGISIAWSIVEYIHDNPKAHPRTLFATHYHELNELEGQLDRVHNFNVSAREVDGKMLFLRKLEPGGSAHSFGIQVARLGGMPHHIVQRATDIL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: IIVTGPNMSGKSALLRQTALISLMAQIGSFVPAESARIGMVDSIFTRVGASDNISMGESTFMVEMQEASNILNNLTPRSLVLFDELGRGTSTYDGISIAWSIVEYIHDNPKAHPRTLFATHYHELNELEGQLDRVHNFNVSAREVDGKMLFLRKLEPGGSAHSFGIQVARLGGMPHHIVQRATDILHRL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: SLVLFDELGRGTSTYD
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: GVDATLDELRALAYSGKDYLIKLQQQEIERTGIPSLKVAYNNVFGYYIEVRNTHKDKVPAEWIRKQTLVSAERYITEELKEYEAKILGAEE
type: DOMAIN
name: DNA_mismatch_repair_MutS_clamp
description: DNA mismatch repair protein MutS, clamp

phrase: TPLMRQYFQIKQKHPDAILLFRVGDFYETFSEDAIVASEILGITLTRRANGAAQFVELAGFPHHALDTYLPKLVRAGKRVAICDQLEDPKKTKTLVKRGITELVTPGVSTN
type: DOMAIN
name: DNA_mismatch_repair_MutS-lik_N
description: DNA mismatch repair protein MutS-like, N-terminal

phrase: TVRSLELLSPMNEGGKSLLDIIDHTITPMGARRIRQWIVFPLKDPARIQARQRVVEFFFRHPEERAIIAEHLTEIGDLERLVTKGAMGRISPREMVQLRVALQALEPIKEVCTHADEENLRTLGGKLELCKELRDKILREVMPDAPAALGRGPVIAHGVDATLDELRALAYSGKDYLIKLQQQEIERTGIPSLKVAYNNVFGYYIEVRNTHKDKVPAEWIRKQTLVSAERYITEELKEYEAKILGAEEKIAALEGQLYALLVAELQRYVAPLQQDSQAVASLDCLLSF
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core
Protein sequence:
MKRGKKYLASLQMFDVKKTYPLQEAISLAKQTQVAKFDAAVECAFHLNLDPKKVDQNLRGALVLPHGTGKVLKVAVLAKGEQAKQAQEAQADYVGDQDLIDKIAKNWFDFDVLVATPEMMPQLSKLGRLLGPKGLMPNPKTGTVTNDVLQAVKEIKNGKIEYRLDKSGNIHAILGKVSFDETKLLENLKTLYLQLMAVKPRTVKGTYIKSVTISTTMAPGIKIDPVTISQ

Annotated regions:
phrase: MPQLSKLGRLLGPKGLMP
type: CONSERVED_SITE
name: Ribosomal_uL1_CS
description: Large ribosomal subunit protein uL1, conserved site
Protein sequence:
MTKTKQRNIRYMTLPDLEQYFEDLGEKKFRAKQVYEWIWQKKAMSFADMTNLSKELRQKLGEEFTLPALTIDATQYSADGTVKNRFKTWDGHLVEGVLIPTESRNTACVSSQIGCSLSCKFCATGYIDRKRNLDFDEIYDEVVLINQQCEKTYGKKLSNIVFMGMGEPLLNYKNVLKAIERITSPDGLAMSPRRITVSTAGVAKQIKQLGDDKVKFKLALSLHAANDAKRHEIMPINDSNNIQSLIEALNYFYKETKSEITFEYILFKNFNDSLKDADELIKVYRQVPADLINIIEYNPIDFARFEKPDEEKVEAFISYLGKHRVNARLRRSRGKDIDAACGQLANKDNH

Annotated regions:
phrase: KTKQRNIRYMTLPDLEQYFEDLGEKKFRAKQVYEWIWQKKAMSFADMTNLSKELRQKLGEEFTLPALTIDATQYSADGTVKNRFKTWDGHLVEGVLIPTESRNTACVSSQIGCSLSCKFCATGYIDRKRNLDFDEIYDEVVLINQQCEKTYGKKLSNIVFMGMGEPLLNYKNVLKAIERITSPDGLAMSPRRITVSTAGVAKQIKQLGDDKVKFKLALSLHAANDAKRHEIMPINDSNNIQSLIEALNYFYKETKSEITFEYILFKNFNDSLKDADELIKVYRQVPADLINIIEYNPIDFARFEKPDEEKVEAFISYLGKHRVNARLRRSRGKDIDAACGQLANK
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: NTACVSSQIGCSLSCKFCATGYIDRKRNLDFDEIYDEVVLINQQCEKTYGKKLSNIVFMGMGEPLLNYKNVLKAIERITSPDGLAMSPRRITVSTAGVAKQIKQLGDDKVKFKLALSLHAANDAKRHEIMPINDSNNIQSLIEALNYFYKETKSEITFEYILFKNFNDSLKDADELIKVYRQVPADLINIIEYNPIDFARFEKPDEEKVEAFIS
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: NIRYMTLPDLEQYFEDLGEKKFRAKQVYEWIWQKKAMSFADMTNLSKELRQKLGEE
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: TESRNTACVSSQIGCSLSCKFCATGYIDRKRNLDFDEIYDEVVLINQQCEKTYGKKLSNIVFMGMGEPLLNYKNVLKAIERITSPDGLAMSPRRITVSTAGVAKQIKQLGDDKVKFKLALSLHAANDAKRHEIMPINDSNNIQSLIEALNYFYKETKSEITFEYILFKNFNDSLKDADELIKVYRQVPADLINIIEYNPIDFARFEKPDEEKVEAFISYLGKHRVNARLRRSRGK
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SQIGCSLSCKFCATGYIDRKRNLDFDEIYDEVVLINQQCEKTYGKKLSNIVFMGMGEPLLNYKNVLKAIERITSPDGLAMSPRRITVSTAGVAKQIKQLGDDKVKFKLALSLHAANDAKRHEIMPINDSNNIQSLIEALNYFYKETKSEITFEYILFKNFNDSLKD
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MSTEKLTVALLSGGASAEREVSLKSGEQVFNALDKQRYLVLRYDPAHDLTRLAADAEKIDVALIILHGRMGEDGTIQGLLESLGIPYQGSGVLGSAVAMNKILSKQLYIHAGLPVAPHLVADRREPPDLDTVADRLGLPVVVKPEHEGSSIGLSIVRNRDQLAAAVETGWQYDRRCLIEKYVHGIEITGGVLGNDHLQALPLIEIIPGEAYEFFDYKAKYTPGASREICPARLSDTITAKAQEYARKAHQALCCKGYSRTDMIVSGNDIFILETNTIPGMTATSLFPQAAAVAGISFSALLDRLIELALED

Annotated regions:
phrase: HGRMGEDGTIQ
type: CONSERVED_SITE
name: D-Ala_lig_Van_CS
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site

phrase: AADAEKIDVALIILHGRMGEDGTIQGLLESLGIPYQG
type: DOMAIN
name: Dala_Dala_lig_N
description: D-alanine--D-alanine ligase, N-terminal domain

phrase: LCCKGYSRTDMIVSGNDIFILETNTIP
type: CONSERVED_SITE
name: D-Ala_lig_Van_CS
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site

phrase: HAGLPVAPHLVADRREPPDLDTVADRLGLPVVVKPEHEGSSIGLSIVRNRDQLAAAVETGWQYDRRCLIEKYVHGIEITGGVLGNDHLQALPLIEIIPGEAYEFFDYKAKYTPGASREICPARLSDTITAKAQEYARKAHQALCCKGYSRTDMIVSGNDIFILETNTIPGMTATSLFPQAAAVAGISFSALLDRLI
type: DOMAIN
name: Dala_Dala_lig_C
description: D-alanine--D-alanine ligase, C-terminal

phrase: KQLYIHAGLPVAPHLVADRREPPDLDTVADRLGLPVVVKPEHEGSSIGLSIVRNRDQLAAAVETGWQYDRRCLIEKYVHGIEITGGVLGNDHLQALPLIEIIPGEAYEFFDYKAKYTPGASREICPARLSDTITAKAQEYARKAHQALCCKGYSRTDMIVSGNDIFILETNTIPGMTATSLFPQAAAVAGISFSALLDRLI
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold
Protein sequence:
MGSAEAACLEPDKGLVYLLGELSGGSNSRSAIEEKAQEPHLTHLLPVARWEQKTRKLSKAFRSPYLACYSLGAAILLLNILRSHCFTQAMLSQPKMESLDNPMAYRVGLALLGVGSTFVLSSFFALGFTGTFLGDYFGILKEARVTTFPFNILDNPMYWGSTANYLGWAVMHASPTGLLLTVVVALIYRVAILYEEPFTAQIYQQKASSSHKRS

Annotated regions:
Protein sequence:
MTQDASPILTSLLDTDAYKLHMQQAVFHHYRHITVAAEFRCRSDELLGVYADEIRHQVTLMGQLALTSDEFIYLSSLPFFQDDYLHWLRDFRFKPEQVSVAVHDGKLDIRIAGLWCEVIMWEVPLLAVISEIVHRRRSTQVTTDQAVQQLRTKLEQFNALSADIDITHFKLMDFGTRRRFSREIQHTVVSTLKDEFPYLVGTSNYDLARTLALAPVGTQAHEWFQAHQQISPTLANSQRVALQVWLDEYPNQLGIALTDCITMDAFLRDFDLAFANRYQGLRHDSGDPIEWGEKAIAHYEKLGIDPMKKVLVFSDNLDLEKALFLYRHFYQRIKLVFGIGTRLTCDIPDVKPLNIVIKLVECNDKPVAKLSDSPGKTICQDPAFVDQLRKAFALPLVKKAS

Annotated regions:
phrase: FKLMDFGTRRRFSREIQHTVVSTLKDEFPYLVGTSNYDLARTLALAPVGTQAHEWFQAHQQISPTLANSQRVALQVWLDEYPNQLGIALTDCITMDAFLRDFDLAFANRYQGLRHDSGDPIEWGEKAIAHYEKLGIDPMKKVLVFSDNLDLEKALFLYRHFYQRIKLVFGIGTRLTCDIPDVKPLNIVIKLVECNDKPVAKLSDSPGKTICQDPAFVDQLRKAFAL
type: DOMAIN
name: N/Namide_PRibTrfase
description: Nicotinate/nicotinamide phosphoribosyltransferase

phrase: LDTDAYKLHMQQAVFHHYRHITVAAEFRCRSDELLGVYADEIRHQVTLMGQLALTSDEFIYLSSLPFFQDDYLHWLRDFRFKPEQVSVAVHDGKLDIRIAGLWCEVIMWEVPLLAVI
type: DOMAIN
name: NAPRTase_N
description: Nicotinate phosphoribosyltransferase, N-terminal domain
Protein sequence:
MAFTPFPPRQPTASARLPLTLMTLDDWALATITGTDSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRDGDGFAWIERRSVRESQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFSELPSKEKQVIREGATTLLWFEHPAERFLIVTDEATANTLTDKLRGEAELNNSQQWLALNIEAGFPVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAGEDLELKMGENWRRTGTVLAAVKLEDGQVVVQVVMNNDMEPDSIFRVRDDMNTLHIEPLPYSLEE

Annotated regions:
phrase: TITGTDSEKYMQGQVTADVSQMTEDQHLLAAHCDAKGKMWSNLRLFRDGDGFAWIERRSVRESQLTELKKYAVFSKVTIAPDDERVLLGVAGFQARAALANLFS
type: DOMAIN
name: GCV_T_N
description: Aminomethyltransferase, folate-binding domain

phrase: QQWLALNIEAGFPVIDAANSGQFIPQATNLQALGGISFKKGCYTGQEMVARAKFRGANKRALWL
type: CONSERVED_SITE
name: YgfZ/GcvT_CS
description: YgfZ/GcvT conserved site

phrase: NKRALWLLAGSASRLPEAGEDLELKMGENWRRTGTVLAAVKLEDGQVVVQVVMNNDMEPDSIFRVRD
type: DOMAIN
name: YgfZ_barrel
description: tRNA-modifying protein YgfZ-like, beta-barrel domain
Protein sequence:
MKHAIRHIHFVGIGGSGMSGIAEVLFNLGYRITGSDLADSATLRRLAGLGIGTFVGHAAAHIDGADAVVTSTAVQSDNPEVLAAREKRIPVVPRALMLAELMRLKQGIAIAGTHGKTTTTSLVASVLDAAGLDPTFVIGGRLNSAGANAQLGSGDYIVVEADESDASFLNLLPVMAVVTNIDADHMETYGHDFAKLKKAFVDFLHRMPFYGVAILCTDDPAVRDIVAEVTCPVTSYGFGEEAQVRAIDVRAVGGQMHFTAQRRNGVTLPDLPIVLNLPGEHNVRNALSVIAVAVELGIPDEAVQRGLAGFKGVGRRFQSYGEVAAQGEPAGSFTVIDDYGHHPVEMAATIAAARGAFPGRRLVLAFQPHRYTRTRDCFEDFVKVIGNADAVLLGEVYAAGEPPIVAADGRTLARALRVAGKVEPVFVDDIGAMPQAILDNARAGDVVLCMGAGSIGAVPGKVVEIAAAASLPQQTTRTRRKGEAS

Annotated regions:
phrase: IAGTHGKTTTTSLVASVLDAAGLDPTFVIGGRLNSAGANAQLGSGDYIVVEADESDASFLNLLPVMAVVTNIDADHMETYGHDFAKLKKAFVDFLHRMPFYGVAILCTDDPAVRDIVAEVTCPVTSYGFGEEAQVRAIDVRAVGGQMHFTAQRRNGVTLPDLPIVLNLPGEHNVRNALSVIAV
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GSFTVIDDYGHHPVEMAATIAAARGAFPGRRLVLAFQPHRYTRTRDCFEDFVKVIGNADAVLLGEVYAAGEPPIVAADGRTLARALRVAGKVEPVFVDDIGAMPQAILDNARAGDVVLCMGA
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: HIHFVGIGGSGMSGIAEVLFNLGYRITGSDLADSATLRRLAGLGIGTFVGHAAAHIDGADAVVTSTAVQSDNPEVLAAREKRIPVVPRALMLAELMRL
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain
Protein sequence:
MNDIFYMKRAIELSKLGEFTTAPNPNVGCVIVKNNIIVGEGWHEQAGKNHAEINALIMAGEKAQGGTAYVTLEPCNHFGKTPPCCNALIKSGINRVVISNIDPNPKISGNGILYLKKHGICVKTGLLSKESKQYNKGFFKRMKTGFP

Annotated regions:
phrase: DIFYMKRAIELSKLGEFTTAPNPNVGCVIVKNNIIVGEGWHEQAGKNHAEINALIMAGEKAQGGTAYVTLEPCNHFGKTPPCCNALIKSGINRVVI
type: DOMAIN
name: CMP_dCMP_dom
description: Cytidine and deoxycytidylate deaminase domain

phrase: MNDIFYMKRAIELSKLGEFTTAPNPNVGCVIVKNNIIVGEGWHEQAGKNHAEINALIMAGEKAQGGTAYVTLEPCNHFGKTPPCCNALIKSGINRVVISNIDPNPKISGNGILYLKKHGICV
type: DOMAIN
name: CMP_dCMP_dom
description: Cytidine and deoxycytidylate deaminase domain

phrase: HAEINALIMAGEKAQGGTAYVTLEPCNHFGKTPPCCNA
type: BINDING_SITE
name: APOBEC/CMP_deaminase_Zn-bd
description: APOBEC/CMP deaminase, zinc-binding
Protein sequence:
MSWSLLSNIIKKFTLLHHFQPIGYIYKYIHICTLNHSLGSCVLQANYSIQNNLRSRTLFIQSEITYSHSLESTHFFGILIFFNIKFRVFNRINDPWTVLDNVPEVMFHDRFFINDFTFWVDVLQEAFRMRRWIFRFEQLVVNPSFSNSQWRIIF

Annotated regions:
Protein sequence:
MMRNVLLLCGGGSSEHEISLLSSEYLQQQLGLIENVNVLKVEIKNEGWFDQKERLVYLDIHTKSVKSDEFNESIHIDFIVPCIHGFPGETGDIQSLFELAGIPYLGCGPEASSNSFNKITSKLWYDAIGIPNTPYLFLTENNEESHQLSREAFDKWGKLFVKAARQGSSVGCYSVTKIEQLSDAIDKAFGFSHQVLVEKAVKPRELEVSAYEMNGQLHISKPGEIIAPDGAFYSYDEKYSAGSHSITEVEAKNLTEQQLATIQLCSEKVFRQMNLRHLSRIDFFLTSEGEIYLNEVNTFPGMTKISMFPKMLQHNGHKFHEFLADCIERSL

Annotated regions:
phrase: HGFPGETGDIQ
type: CONSERVED_SITE
name: D-Ala_lig_Van_CS
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site

phrase: MNLRHLSRIDFFLTSEGEIYLNEVNTFP
type: CONSERVED_SITE
name: D-Ala_lig_Van_CS
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site

phrase: KLWYDAIGIPNTPYLFLTENNEESHQLSREAFDKWGKLFVKAARQGSSVGCYSVTKIEQLSDAIDKAFGFSHQVLVEKAVKPRELEVSAYEMNGQLHISKPGEIIAPDGAFYSYDEKYSAGSHSITEVEAKNLTEQQLATIQLCSEKVFRQMNLRHLSRIDFFLTSEGEIYLNEVNTFPGMTKISMFPKMLQHNGHKFHEFLADCI
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold

phrase: NVLLLCGGGSSEHEISLLSSEYLQQQLGLIENVNVLKVEIKNEGWFDQKERLVYLDIHTKSVKSDEFNESIHIDFIVPCIHGFPGETGDIQSLFELAGIPYLG
type: DOMAIN
name: Dala_Dala_lig_N
description: D-alanine--D-alanine ligase, N-terminal domain

phrase: AIGIPNTPYLFLTENNEESHQLSREAFDKWGKLFVKAARQGSSVGCYSVTKIEQLSDAIDKAFGFSHQVLVEKAVKPRELEVSAYEMNGQLHISKPGEIIAPDGAFYSYDEKYSAGSHSITEVEAKNLTEQQLATIQLCSEKVFRQMNLRHLSRIDFFLTSEGEIYLNEVNTFPGMTKISMFPKMLQHNGHKFHEFLADC
type: DOMAIN
name: Dala_Dala_lig_C
description: D-alanine--D-alanine ligase, C-terminal
Protein sequence:
MGKPRQNPSTLVSTLCEAEPKGKLWVNGYAGTQGTRDATLQTRLIPLSFHLQRGKGLAAPLSALSAPRLPERPADGRVAVDAQPAARSMDSDSGEQSEGEPVTAAGPDVFSSKSLALQAQKKILSKIASKTVANMLIDDTSSEIFDELYKVTKEHTHNKKEAHKIMKDLIKVAIKIGILYRNNQFSQEELVIVEKFRKKLNQTAMTIVSFYEVEYTFDRNVLSNLLHECKDLVHELVQRHLTPRTHGRINHVFNHFADVEFLSTLYSLDGDCRPNLKRICEGINKLLDEKVL

Annotated regions:
Protein sequence:
MPKPKEYVLKKSEEIEGTKVEGPWLDDTKSLEEVVSLYTQIGFQATHLGKAIEIWRKIEEKREKGEEIRVFLGYTSNIVSSGLREIIAWLVKHRKVDVIVTTAGGVEEDFIKALKPFILGDWIVNDAELRKKGINRIGNIFVPNDRYIEFEKYMIPFFERILEIEREKGRPLTASEFIYELGRFMDEKLGKEKEKSIIYWAYRNEIPIFCPAITDGSIGDMLYFFKEERRDRELIIDIANDIVKLNNLAVTAKETASIILGGSLPKHAIINANLFRGGSDYAIYITTAVPWDGSLSGAPPSEGVSWGKIRAKADYVEIWADATLVFPILVWMVMKR

Annotated regions:
Protein sequence:
MSTAQSPIQTDVQHVPAKTTKSIKLVDEAQAKTNLLGMTQAQLADYFKSIGEKPFRSTQVIKWIYQQGVTDFEQMTNLSKSLRDKLSANACVIPPKVIHRQYSDDGTRKWVFEVTGGSLVETVLIPADDSKLNGRKTLCVSSQVGCALDCSFCSTGKQGFERDLTAAEILGQLWVANASYMTDENDSLENVDHSLWENNVTNVVMMGMGEPLLNYRPVVSSMELMLSDHAYGLSKRRVTLSTSGVVPKMYELAQELDVALAISLHAPNDELRNELVPINKKYPLEQLMAAARNYVFDVNPRHKKHVTIEYVMLDGVNDSNEHAEQLVALLGNLPSKINLIPFNPFPHANYDKSSNNRIHAFSNILSEAGFVCTIRQTRGDDIDAACGQLVGQVADRTRRSAAWQQSIKDRENS

Annotated regions:
phrase: SSQVGCALDCSFCSTGKQGFERDLTAAEILGQLWVANASYMTDENDSLENVDHSLWENNVTNVVMMGMGEPLLNYRPVVSSMELMLSDHAYGLSKRRVTLSTSGVVPKMYELAQELDVALAISLHAPNDELRNELVPINKKYPLEQLMAAARNYVFDVNPRHKKHVTIEYVMLDGVNDSN
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LNGRKTLCVSSQVGCALDCSFCSTGKQGFERDLTAAEILGQLWVANASYMTDENDSLENVDHSLWENNVTNVVMMGMGEPLLNYRPVVSSMELMLSDHAYGLSKRRVTLSTSGVVPKMYELAQELDVALAISLHAPNDELRNELVPINKKYPLEQLMAAARNYVFDVNPRHKKHVTIEYVMLDGVNDSNEHAEQLVALLGNLPSKINLIPFNPFPHANYDKSSNNRIHAFSNILSEAGFVCTIRQTRGD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TNLLGMTQAQLADYFKSIGEKPFRSTQVIKWIYQQGVTDFEQMTNLSKSLRDKLSANAC
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain