nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MKRALISVSDKNGIVPFAEKLVELGVEIISTGGTKAAFEQAGVPVTGIEDVTEFPEMLDGRVKTLHPAIHGGLLARRDTAEHMEAIAAHDIKPIDLVVVNLYPFQETIQKSGVTLEEAIENIDIGGPSMLRSAAKNYAAVTVVVDTADYDTVLTELEEHGATTFETRQRLAAKVFRHTAAYDALIAEYLTNITGETFPEKVTLTYNRKQVLRYGENPHQDAAFYTEPGTVENSISSAKQLHGKELSYNNIRDADAALKIASEFTEPVAVAVKHMNPCGVGVGENIEEAYLKAYEADETSIFGGIVALNKEVDAKTAEHMSKIFLEIIIAPSFSEEAFAILAKKKNIRLLTVPFAGSVKGFEKTSVNGGLLIQASDSVIEDTASYEVVTEKQPTEAEMKALIAQWKIVKHVKSNAIVVGSDKQTLGIGAGQMNRIGSALIALEQAGEKAKGAVLASDAFFPMDDTVEAAAKAGITAIIQPGGSIKDKESIEMANKYGISMVLTHVRHFKH

Annotated regions:
phrase: GIVPFAEKLVELGVEIISTGGTKAAFEQAGVPVTGIEDVTEFPEMLDGRVKTLHPAIHGGLLARRDTAEHMEAIAAHDIKPIDLVVVNLYPFQETIQKSGVTLEEAIENIDIGGP
type: DOMAIN
name: MGS-like_dom
description: Methylglyoxal synthase-like domain

phrase: GIVPFAEKLVELGVEIISTGGTKAAFEQAGVPVTGIEDVTEFPEMLDGRVKTLHPAIHGGLLARRDTAEHMEAIAAHDIKPIDLVVVNLYPFQETIQKSGVTLEEAIENIDIGG
type: DOMAIN
name: MGS-like_dom
description: Methylglyoxal synthase-like domain

phrase: MKRALISVSDKNGIVPFAEKLVELGVEIISTGGTKAAFEQAGVPVTGIEDVTEFPEMLDGRVKTLHPAIHGGLLARRDTAEHMEAIAAHDIKPIDLVVVNLYPFQETIQKSGVTLEEAIENIDIGGPSMLRSAAKNYAAVTVV
type: DOMAIN
name: MGS-like_dom
description: Methylglyoxal synthase-like domain
Protein sequence:
MSSCNFTHATFMLIGIPGLEEAHFWFGFPLLSMYAVALFGNCIVVFIVRTERSLHAPMYLFLCMLAAIDLALSTSTMPKILALFWFDSREITFDACLAQMFFIHALSAIESTILLAMAFDRYVAICHPLRHAAVLNNTVTVQIGMVALVRGSLFFFPLPLLIKRLAFCHSNVLSHSYCVHQDVMKLAYTDTLPNVVYGLTAILLVMGVDVMFISLSYFLIIRAVLQLPSKSERAKAFGTCVSHIGVVLAFYVPLIGLSVVHRFGNSLDPIVHVLMGDVYLLLPPVINPIIYGAKTKQIRTRVLAMFKISCDKDIEAGGNT

Annotated regions:
phrase: GNCIVVFIVRTERSLHAPMYLFLCMLAAIDLALSTSTMPKILALFWFDSREITFDACLAQMFFIHALSAIESTILLAMAFDRYVAICHPLRHAAVLNNTVTVQIGMVALVRGSLFFFPLPLLIKRLAFCHSNVLSHSYCVHQDVMKLAYTDTLPNVVYGLTAILLVMGVDVMFISLSYFLIIRAVLQLPSKSERAKAFGTCVSHIGVVLAFYVPLIGLSVVHRFGNSLDPIVHVLMGDVYLLLPPVINPII
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM
Protein sequence:
MAAPQGGYPPQEGYGQPAGYGSPVQQPAGLAAGAPAQGQAGGRKKRVYAGEAFDFGSGANAALGGQLPAGGSYGAYPPQPQAAGYQQPMYGADPTQVQAAAPGYAAPVSPQVAQMTQQFGAMGMTDPHLLPPQPVAPAPQAQAPRAVPLNQLYPTDLLTQPFNVAELDYPPPPIVLPPGTSVYPSPYANCPPKYVRSTLNAVPTTSSLLKKSKLPFALVIQPYAALHDSEDPVPVVPDQVISRCRRCRSYINPFVTFLDHGHRWRCNMCNLTNDVPQAFDWDTALQKPADRSLRPDLNHSVVEFVAPQEYMVRPPQPLVYLFLIDVSYASVTNGLLATTARCIRESLDRIPNADRRTRLGFIAVDSSLHYFSIPRDGSENSEPRMLVISDLDEPFLPIPGDLLVTLSECRENIEIFLDKLQEMFQNTQSNACAMGSALRAGYKLISPVGGKMTVLSSSLPNIGHGSLTMREDKKVLGTSKESSLLQTANSFYKSFAVECSKAQVSVDMFLFSSQYQDVASLSNLPRYTGGQTYFYPGWNAARGEDAIKFAREFSDYLSSEIGLEAVLRVRATTGLRMNTFYGNFFNRSSDLCAFPAFPRDQAYVVEVAIDETVTKPVVCLQTAVLHTTCNGERRIRVLTLALPTTQNLADVYASADQQAVATYFSHKAVERALSSGLEPAREALQTKAVELLSTYRKELAGGSVSGGGLQFPANLRGLPVLFLAMIKNLGLRKSAQIPTDMRSAALCLLSTLPLPLLMQYIYPKMYSLHDMPDTAGLPDEQTGEILLPPPINLSSERIVPYGLYLIDDGQTQFLWVGRDAVPQLIEDVFGLQDKSQLRVGKQNLPDVDNEFNQRVRAVVEKSRDHRSKGVGSIVVPHLYVVKEDGEPGLRLWAQTMLVEDRADQSVSLVQWMGSLREKV

Annotated regions:
phrase: ISRCRRCRSYINPFVTFLDHGHRWRCNMCNLTNDVPQ
type: DOMAIN
name: Znf_Sec23_Sec24
description: Zinc finger, Sec23/Sec24-type

phrase: GLEAVLRVRATTGLRMNTFYGNFFNRSSDLCAFPAFPRDQAYVVEVAIDETVTKPVVCLQTAVLHTTCNGERRIRVLTLALPT
type: DOMAIN
name: Sec23_24_beta_S
description: Sec23/Sec24 beta-sandwich

phrase: LPPPINLSSERIVPYGLYLIDDGQTQFLWVGRDAVPQLIEDVFGLQDKSQLRVGKQNLPDVDNEFNQRV
type: DOMAIN
name: Gelsolin-like_dom
description: Gelsolin-like domain

phrase: PQPLVYLFLIDVSYASVTNGLLATTARCIRESLDRIPNADRRTRLGFIAVDSSLHYFSIPRDGSENSEPRMLVISDLDEPFLPIPGDLLVTLSECRENIEIFLDKLQEMFQNTQSNACAMGSALRAGYKLISPVGGKMTVLSSSLPNIGHGSLTMREDKKVLGTSKESSLLQTANSFYKSFAVECSKAQVSVDMFLFSSQYQDVASLSNLPRYTGGQTYFYPGWNAARGEDAIKFAREFSDYLSSE
type: DOMAIN
name: Sec24-like_trunk_dom
description: Sec24-like, trunk domain

phrase: PQPLVYLFLIDVSYASVTNGLLATTARCIRESLDRIPNADRRTRLGFIAVDSSLHYFSIPRDGSENSEPRMLVISDLDEPFLPIPGDLLVTLSECRENIEIFLDKLQEMFQNTQSNACAMGSALRAGYKLISPVGGKMTVLSSSLPNIGHGSLTMREDKKVLGTSKESSLLQTANSFYKSFAVECSKAQVSVDMFLFSSQYQDVASLSNLPRYTGGQTYFYPGWNAARGEDAIKFAREFSD
type: DOMAIN
name: Sec23/24_trunk_dom
description: Sec23/Sec24, trunk domain

phrase: DQQAVATYFSHKAVERALSSGLEPAREALQTKAVELLSTYRKELAGGSVSGGGLQFPANLRGLPVLFLAMIKNLGLRKSAQIPTDMRSAALCLLSTLPLPLL
type: DOMAIN
name: Sec23/24_helical_dom
description: Sec23/Sec24, helical domain
Protein sequence:
MTRIKRGVSSKFRHKKILKKTKGYYGARSRSYRIAFQAFIKAGQYAYRDRKNKKRTFRKIWICRINSAVRKHGLSYSCFMYKIKKLSIFIDRKILSDLAVLNKEAFSELIKKVKSIS

Annotated regions:
phrase: KRTFRKIWICRINSAV
type: CONSERVED_SITE
name: RIBOSOMAL_L20_CS
description: Large ribosomal subunit protein bL20, conserved site
Protein sequence:
MGGLWSMVLPVLSDQKNPNRSPLMSDIAQKVEALAIQAAKTEDCEVVEVIYRREGGVYVVRVAADKLPDDQGQERHISLDECGSISRQISSLLDVHDVIPNAYHLEVSSPGIERPLIKDGDFTRFAGKLVEIRTYQPMDTESGPRKKFRGTLLGLQEAMVVVAEANGEVRIPWEQVAKAHLTFDF

Annotated regions:
phrase: AAKTEDCEVVEVIYRREGGVYVVRVAADKLPDDQGQERHISLDECGSISRQISSLLDVHDVIPNAYHLEVSSPGI
type: DOMAIN
name: RimP_N
description: Ribosome maturation factor RimP, N-terminal

phrase: KDGDFTRFAGKLVEIRTYQPMDTESGPRKKFRGTLLGLQEAMVVVAEANGEVRIPWEQVAKAHLTFD
type: DOMAIN
name: RimP_C
description: Ribosome maturation factor RimP, C-terminal

phrase: GIERPLIKDGDFTRFAGKLVEIRTYQPMDTESGPRKKFRGTLLGLQEAMVVVAEANGEVRIPWEQVAKAHLTFD
type: DOMAIN
name: RimP_C
description: Ribosome maturation factor RimP, C-terminal
Protein sequence:
MIKAKKTYVLKLYVAGNTPNSVRALKTLKNILEQEFEGVYALKVIDVLKSPQLAEEDKILATPTLSKILPPPVRKIIGDLSDRERVLIGLDLLYEELSEGDFEE

Annotated regions:
phrase: TYVLKLYVAGNTPNSVRALKTLKNILEQEFEGVYALKVIDVLKSPQLAEEDKILATPTLSKILPPPVRKII
type: DOMAIN
name: KaiB_domain
description: KaiB domain

phrase: KLYVAGNTPNSVRALKTLKNILEQEFEGVYALKVIDVLKSPQLAEEDKILATPTLSKILPPPVRKIIGDLSDRERVLIGL
type: DOMAIN
name: KaiB_domain
description: KaiB domain

phrase: KLYVAGNTPNSVRALKTLKNILEQEFEGVYALKVIDVLKSPQLAEEDKILATPTLSKILPPPVRKIIGDLSDRERVLIGLD
type: DOMAIN
name: KaiB_domain
description: KaiB domain
Protein sequence:
MLILISPAKTLDYQSPLTTTRYTLPELLDNAQQLIHEARKLTPPQISSLMRISDKLAGINAARFHDWQPNFTPENARQAILVFKGDVYTGLQAETFSEDDFDFAQQHLRMLSGLYGVLRPLDLMQPYRLEMGIRLENARGKDLYQFWGDIITNKLNEALAAQGDNVVINLASDEYFKSVKPKKLNAEIIKPVFLDEKNGKFKIISFYAKKARGLMSRFIIENRLTKPEQLTGFNSEGYFFDEASSSNGELVFKRYEQR

Annotated regions:
Protein sequence:
MNIEKFTTKFQEALSERQSLAIGKDNQFIEPVHLLTALLNQQGGSIAPILTASGVNVALLRNELKTELNKLPQVIGNGGDVQLSRQLINLLNLCDKFAQQNQDKFISSELFLFAALEERGTISDILKKCGAKKEQISQAIQHIRGGQNVNDQNAEESRQALEKYTIDLTARAESGKLDPVIGRDEEIRRAIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLEMLEKELAEKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMSELQYGRIPDLEKQLEQAETSEGKEMTLLRYRVTDEEIAEVLSKATGIPVSKMMEGEKEKLLRMEDELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSEMKALVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELVFTDALLDFIGEVGYDPIYGARPLKRAIQQEIENSLAQQILSGALLPGKVVTIDYANAEVQARQ

Annotated regions:
phrase: RPIGSFLFLGPTGVGKTELCKTLAKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSEMKALVMSVVSQHFRPEFINRID
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: TKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVDEPS
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: PIGSFLFLGPTGVGKTELCKTLAKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESYSEMKALVMSVVSQHFRPEFI
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: SVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRKRLE
type: DOMAIN
name: ClpA/ClpB_AAA_lid
description: ClpA/ClpB, AAA lid domain

phrase: VLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLKAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATT
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: RIDMSEFMEKHSVSRLVG
type: CONSERVED_SITE
name: ClpA/B_CS2
description: ClpA/B, conserved site 2

phrase: DAGNLLKPSLAR
type: CONSERVED_SITE
name: ClpA/B_CS1
description: ClpA/B, conserved site 1

phrase: QSLAIGKDNQFIEPVHLLTALLNQQGGSIAPILTASGVNVALLRNELKTE
type: DOMAIN
name: Clp_R_dom
description: Clp, repeat (R) domain

phrase: CDKFAQQNQDKFISSELFLFAALEERGTISDILKKCGAKKEQISQAIQHIR
type: DOMAIN
name: Clp_R_dom
description: Clp, repeat (R) domain

phrase: IEKFTTKFQEALSERQSLAIGKDNQFIEPVHLLTALLNQQGGSIAPILTASGVNVALLRNELKTELNKLPQVIGNGGDVQLSRQLINLLNLCDKFAQQNQDKFISSELFLFAALEERGTISDILKKCGAKKEQISQAIQHIRG
type: DOMAIN
name: Clp_R_dom
description: Clp, repeat (R) domain

phrase: LGKENIRAIASIQLERLAKRMETRGYELVFTDALLDFIGEVGYDPIYGARPLKRAIQQEIENSLAQQILSGALLPGKVVTIDYANAEVQ
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal

phrase: LGKENIRAIASIQLERLAKRMETRGYELVFTDALLDFIGEVGYDPIYGARPLKRAIQQEIENSLAQQILSGALLPGKVVT
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal
Protein sequence:
MVLRNPEKKGIASTLDERSGEIFRRIVETYLESGEPLGSRNLSRLLPMSLSPASVRNVMSDLEDLGLIYSPHVSAGRLPTQTGLRFFVDAFMQVGNLSAEERTSIERQVRRADRDQPIDSLLAEASQMLSGMSRGAGLVITTKSDPVLKHVEFIRLAPTKALAVLVGDHDQVENRIIELPAGITSAQLTEAANFVNAHLAGQTIPELRSQLEKVKETVRGELDALSQDLVERGLAIWSGSEGDEKPARLIVRGRANLLEGLEGTEDIERLRMLFDDLEKKDSLIELLDLAESGPGVRIFIGSENKLFSLSGSSLIVAPYRDSDDRIVGAVGVIGPTRLNYSRIVPMVDYTAQLMSRLSR

Annotated regions:
phrase: DSLLAEASQMLSGMSRGAGLVITTKSDPVLKHVEFIRLAPTKALAVLVGDHDQVENRIIELPAGITSAQLTEAANFVNAHLAGQTIPELRSQLEKVKETVRGELDALSQDLVERGLAIWSGSEGDEKPARLIVRGRANLLEGLEGTEDIERLRMLFDDLEKKDSLIELLDLAESGPGVRIFIGSENKLFSLSGSSLIVAPYRDSDDRIVGAVGVIGPTRLNYSRI
type: DOMAIN
name: HrcA_C
description: Heat-inducible transcription repressor HrcA, C-terminal
Protein sequence:
MARVKRAVNAHKKRRSILKASRGYRGQRSRLYRKAKEQQLHSLNYAYRDRRARKGEFRKLWIARINAAARLNDITYNRLIQGLKAAGVEVDRKNLADIAISDPAAFTALVDVARAALPEDVNAPSGEAA

Annotated regions:
phrase: KGEFRKLWIARINAAA
type: CONSERVED_SITE
name: RIBOSOMAL_L20_CS
description: Large ribosomal subunit protein bL20, conserved site
Protein sequence:
MKVISNFQNKKILILGLAKSGEAAAKLLTKLGALVTVNDSKPFDQNPAAQALLEEGIKVICGSHPVELLDEDFEYMVKNPGIPYDNPMVKRALAKEIPILTEVELAYFVSEAPIIGITGSNGKTTTTTMIADVLNAGGQSALLSGNIGYPASKVVQKAIAGDTLVMELSSFQLVGVNAFRPHIAVITNLMPTHLDYHGSFEDYVAAKWMIQAQMTESDYLILNANQEISATLAKTTKATVIPFSTQKVVDGAYLKDGILYFKEQAIIAATDLGVPGSHNIENALATIAVAKLSGIADDIIAQCLSHFGGVKHRLQRVGQIKDITFYNDSKSTNILATQKALSGFDNSRLILIAGGLDRGNEFDDLVPDLLGLKQMIILGESAERMKRAANKAEVSYLEARNVAEATELAFKLAQTGDTILLSPANASWDMYPNFEVRGDEFLATFDCLRGDA

Annotated regions:
phrase: ITGSNGKTTTTTMIADVLNAGGQSALLSGNIGYPASKVVQKAIAGDTLVMELSSFQLVGVNAFRPHIAVITNLMPTHLDYHGSFEDYVAAKWMIQAQMTESDYLILNANQEISATLAKTTKATVIPFSTQKVVDGAYLKDGILYFKEQAIIAATDLGVPGSHNIENALATIAV
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: HRLQRVGQIKDITFYNDSKSTNILATQKALSGFDNSRLILIAGGLDRGNEFDDLVPDLLGLKQMIILGESAERMKRAANKAEVSYLEARNVAEATELAFKLAQTGDTILLSP
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MLIGIVIVAAGRGERAGSAEEGPKQYRPIGGKPVLAHTLQQFVTWPRSGPIVVVIHPDDRSLYDDATAGLHDPQRIIVTFGGATRQQSVLAGLQALSGTSATHVMIHDAARPFIDHSVLDRVATVLDRGAPAVLPVIPVTDTLKRGGNDGLVQETVSRAGLYAAQTPQSFRFSDILDVHAKAAASGRHDFTDDASIAEWAGLPVTLAEGSVDNIKLTVKRDMAMADEKLSRFVVPDVRTGNGYDVHQLEPGDGVTLCGVFIPHHLKLSGHSDADVALHALTDALLATCGAGDIGDHFPPTDMRWRGAASTIFLEHAAKLVRDRGGVITNADVSLIAEAPKIAPHRDQMRKNLADTLDITIDRCSVKATTNEKMGFVGRNEGIAAIATATVVYRGSIE

Annotated regions:
phrase: GRHDFTDDASIAEWAGLPVTLAEGSVDNIKLTVKRDMAMADEKLSRFVVPDVRTGNGYDVHQLEPGDGVTLCGVFIPHHLKLSGHSDADVALHALTDALLATCGAGDIGDHFPPTDMRWRGAASTIFLEHAAKLVRDRGGVITNADVSLIAEAPKIAPHRDQMRKNLADTLDITIDRCSVKATTNEKMGFVGRNEGIAAIATATV
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: SDADVALHALTDALL
type: CONSERVED_SITE
name: MECDP_synthase_CS
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site

phrase: RTGNGYDVHQLEPGDGVTLCGVFIPHHLKLSGHSDADVALHALTDALLATCGAGDIGDHFPPTDMRWRGAASTIFLEHAAKLVRDRGGVITNADVSLIAEAPKIAPHRDQMRKNLADTLDITIDRCSVKATTNEKMGFVGRNEGIAAIATATV
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RTGNGYDVHQLEPGDGVTLCGVFIPHHLKLSGHSDADVALHALTDALLATCGAGDIGDHFPPTDMRWRGAASTIFLEHAAKLVRDRGGVITNADVSLIAEAPKIAPHRDQMRKNLADTLDITIDRCSVKATTNEKMGFVGRNEGIAAIATAT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: VRTGNGYDVHQLEPGDGVTLCGVFIPHHLKLSGHSDADVALHALTDALLATCGAGDIGDHFPPTDMRWRGAASTIFLEHAAKLVRDRGGVITNADVSLIAEAPKIAPHRDQMRKNLADTLDITIDRCSVKATTNEKMGFVGRNEGIAAIATATVV
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RTGNGYDVHQLEPGDGVTLCGVFIPHHLKLSGHSDADVALHALTDALLATCGAGDIGDHFPPTDMRWRGAASTIFLEHAAKLVRDRGGVITNADVSLIAEAPKIAPHRDQMRKNLADTLDITIDRCSVKATTNEKMGFVGRNEGIAAIATAT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: VMIHDAA
type: CONSERVED_SITE
name: ISPD_synthase_CS
description: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site
Protein sequence:
MAARRKARKRALDLLYEADQKAVSGGAPASGDAVALLAERIATPHGEAPMREYTVEIVEGVAAHQARIDELLETYAQGWSLERMPAVDRAILRIGVWELLFNDDVPDAVAVDEAVALAAELSTDDSPTFVNGLLGQLLRLAPVLRDEEAAAGG

Annotated regions:
phrase: RKARKRALDLLYEADQKAVSGGAPASGDAVALLAERIATPHGEAPMREYTVEIVEGVAAHQARIDELLETYAQGWSLERMPAVDRAILRIGVWELLFNDDVPDAVAVDEAVALAAELSTDDSPTFVNGLLGQLL
type: DOMAIN
name: NusB_RsmB_TIM44
description: NusB/RsmB/TIM44
Protein sequence:
MTDKRKDGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKEVSPHRERSALPTPHEIRHHLDDYVIGQEPAKKVLAVAVYNHYKRLRNGDTSNGIELGKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRVNTGSGIGFGATVKGESEKATEGELLLQAEPEDLIKFGLIPEFIGRLPVVATLSELSEDALIQILKEPKNALTKQYQALFNLEGVELEFREEALNAIARKAMKRKTGARGLRSIVEGALLDTMYDLPSMDSVDKVVIDESVIAGQSKPLLIYGKPEAQASGE

Annotated regions:
phrase: YCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIR
type: DOMAIN
name: Znf_CppX_C4
description: Zinc finger, ClpX C4-type

phrase: LLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIRE
type: DOMAIN
name: Znf_CppX_C4
description: Zinc finger, ClpX C4-type

phrase: LSEDALIQILKEPKNALTKQYQALFNLEGVELEFREEALNAIARKAMKRKTGARGLRSIVEGALLDTMYDLPSMDSVDKVVIDESVIAGQSKPLL
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal

phrase: LSEDALIQILKEPKNALTKQYQALFNLEGVELEFREEALNAIARKAMKRKTGARGLRSIVEGALLDTMYDLPSMDS
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal

phrase: TDKRKDGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLCNDIIREEIKEV
type: DOMAIN
name: Znf_CppX_C4
description: Zinc finger, ClpX C4-type

phrase: GKSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRVNTGSGIGFGATVKGESEKATEGELLLQAEPEDLIKFGLI
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: KSNILLIGPTGSGKTLLAETLARFLDVPFTMADATTLTEAGYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTIAAVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVIGQRVNTGSGIGFGATVKGESEKATEGELLLQAEPEDLIKFGLIPEFIGRLP
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core
Protein sequence:
MKPPSLPLLLLLLHLSATISAAPSLSPTPSPTTSPIPPHKPSSSSSPLDPKQLKALESLNIPTVKDPCNHRPTTKSTSSSVVTCDTSSPFRLVTSISFTNCSTDLSISTTALRALSPSLTSLSFLNCPSLSPPPRLPDSLHSFTAVSSFLRRRNGLSGVFLARLVNLTDLTVSSVPVSTSGLFVILGNMHEIVSLTISHANLSGNIPKSFHSNLTFIDLSDNLLKGSIPTSITLLSNLKSLNLSKNTISGDIPDSIGDLISLKNLSLSSNKLSGPIPDSISSIPELTHLDLSGNQLNGTIPRFISKMKYLTHLNLANNAFHGVLPFNASFIKNLEVFKIGGNSDLCYNHSVLSSKMKLGIAQCDKHGLPLSPPPQKEDSNSDYDYGNEDDTSEKKKEEHHGPNKVVLGVAIGLSSLVFLIIFMILLAKWCG

Annotated regions:
phrase: SNLKSLNLSKNTISGDIPDSIGDLISLKNLSLSSNKLSGPIPDSISSIPELTHLDLSGNQ
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: NLTFIDLSDNLLKGSIPTSI
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat
Protein sequence:
MSLNFLDFEQPIAELEAKIDSLTAVSRQDEKLDINIDEEVHRLREKSVELTRKIFADLGAWQIAQLARHPQRPYTLDYVRLAFDEFDELAGDRAYADDKAIVGGIARLDGRPVMIIGHQKGRETKEKIRRNFGMPAPEGYRKALRLMQMAERFKMPIITFIDTPGAYPGVGAEERGQSEAIARNLREMSRLGVPVVCTVIGEGGSGGALAIGVGDKVNMLQYSTYSVISPEGCASILWKSADKAPLAAEAMGIIAPRLKELKLIDSIIPEPLGGAHRNPEAMAVSLKAQLLADLADLDVLSTEDLKNRRYQRLMSYGYA

Annotated regions:
phrase: NIDEEVHRLREKSVELTRKIFADLGAWQIAQLARHPQRPYTLDYVRLAFDEFDELAGDRAYADDKAIVGGIARLDGRPVMIIGHQKGRETKEKIRRNFGMPAPEGYRKALRLMQMAERFKMPIITFIDTPGAYPGVGAEERGQSEAIARNLREMSRLGVPVVCTVIGEGGSGGALAIGVGDKVNMLQYSTYSVISPEGCASILWKSADKAPLAAEAMGIIAPRLKELKLIDSIIPEPLGGAHRNPEAMAVSLKAQLLADLA
type: DOMAIN
name: COA_CT_C
description: Acetyl-coenzyme A carboxyltransferase, C-terminal
Protein sequence:
MRLSAIMERAGLDAGDAGGLGDAGGAGDAAVTGFAIDHRKVAPGTIFGAFQGASVNGEDFIDAAIAGGAVAIVARPGARVEGAVHVADPMPRRAFARMAAQFFVPVPATIVAVTGTNGKTSTVEMTRQIWRMCGFSAASIGTLGVTTPDESVSTGLTTPDIVTFLSNMTGLAREGVTHVAYEASSHGLSQFRNEGLKVAAGAFTNLSRDHLDYHDTMEEYFAAKMRLFDEVVVDGGKAVIWADDPHSDAAIDHARRRGLSVLSIGNRAGEDGIRLSGRQPTELGQELALGFGGAEYKVRLPLIGAYQAANALMAAGLVLATADASGPAAAQVFDAMSRLQPVRGRLERAAINRAGAPAYVDYAHTPEALEAAIAALRPHVGAQGRLIVVFGAGGDRDAGKRGPMGAIAARDADAAIVTDDNPRGEDPAHIRTAVMVGAEGASNVTEIAGRRDAIAAAIRQAGKGDIVLIAGKGHEQGQVYGRGEATRVHPFDDVTVARECAA

Annotated regions:
phrase: GRLERAAINRAGAPAYVDYAHTPEALEAAIAALRPHVGAQGRLIVVFGAGGDRDAGKRGPMGAIAARDADAAIVTDDNPRGEDPAHIRTAVMVGAEGASNVTEIAGRRDAIAAAIRQAGKGDIVLIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: VTGTNGKTSTVEMTRQIWRMCGFSAASIGTLGVTTPDESVSTGLTTPDIVTFLSNMTGLAREGVTHVAYEASSHGLSQFRNEGLKVAAGAFTNLSRDHLDYHDTMEEYFAAKMRLFDEVVVDGGKAVIWADDPHSDAAIDHARRRGLSVLSIGNRAGEDGIRLSGRQPTELGQELALGFGGAEYKVRLPLIGAYQAANALMAAG
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central
Protein sequence:
MATANNPPSGLLDPTLCEDRIFYNILEIEPRFLTSDSVFGTFQQSLTSHMRKLLGTWMFSVCQEYNLEPNVVALALNLLDRLLLIKQVSKEHFQKTGSACLLVASKLRSLTPISTSSLCYAAADSFSRQELIDQEKELLEKLAWRTEAVLATDVTSFLLLKLLGGSQHLDFWHHEVNTLITKALVDPKTGSLPASIISAAGCALLVPANVIPQDTHSGGVVPQLASILGCDVSVLQAAVEQILTSVSDFDLRILDSY

Annotated regions:
phrase: AVLATDVTSFLLLKLLGGSQHLDFWHHEVNTLITKALVDPKTGSLPASIISAAGCALLVPANVIPQDTHSGGVVPQLASILGCDVSVLQAAVEQILTSVSDFDLR
type: DOMAIN
name: K-cyclin_C
description: K cyclin, C-terminal

phrase: TWMFSVCQEYNLEPNVVALALNLLDRLLLIKQVSKEHFQKTGSACLLVASKLRSLTPISTSSLCYAAADSFSRQELIDQEKELL
type: DOMAIN
name: Cyclin-like_dom
description: Cyclin-like domain

phrase: IFYNILEIEPRFLTSDSVFGTFQQSLTSHMRKLLGTWMFSVCQEYNLEPNVVALALNLLDRLLLIKQVSKEHFQKTGSACLLVASKLRSLTPISTSSLCYAAADSFSRQELIDQEKELLEKLAWR
type: DOMAIN
name: Cyclin_N
description: Cyclin, N-terminal

phrase: RKLLGTWMFSVCQEYNLEPNVVALALNLLDR
type: CONSERVED_SITE
name: Cyclins_cyclin-box
description: Cyclins, cyclin-box
Protein sequence:
MKLRSKAAALLLLALAVLLLALLSLRARRDPEPPGFPARPEAAPQRRHAPVPTLPPEPRAFPGAAGRRSPRRQPPRLRPRAGRPRAASREKLARRPGETRSLHSVPPELWIHLAVVACGNRLEETLVMLKSAVLFSHRKMRFHIFTEDALKPEFDKQLRQWPDSYTKKFEHRLYPITFSVGNPQEWKKLFKPCAAQRLFLPAILKDVDSLLYVDTDVLFLRPVDDIWKLLRQFNSTQLAAMAPEHEIPKIGWYSRFARHPFYGSAGVNSGVMLMNLTRIRNTQFKNSLIPAGLAWEEMLLPLYQKYKSAITWGDQDLLNIIFYYNPECLYVFPCQWNYRPDHCMYGSNCKEAEREGVSVLHGNRGVYHDDKQPTFRALYEAIRDFPFQDNLFQSMYYPLQLKFLETVHTLCGRIPQVFLKQIEKTMRRAYEKHVIIHMGPNPMS

Annotated regions:
Protein sequence:
MLKKILLLALLPAIAFAEELPAPVKAIEKQGITIIKTFDAPGGMKGYLGKYQDMGVTIYLTPDGKHAISGYMYNEKGENLSNTLIEKEIYAPAGREMWQRMEQSHWLLDGKKDAPVIVYVFADPFCPYCKQFWQQARPWVDSGKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQEYEASGGKLKLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTLQQAVGLPDQKTLNIIMGNK

Annotated regions:
phrase: PVIVYVFADPFCPYCKQFWQQARPWVDSGKVQLRTLLVGVIKPESPATAAAILASKDPAKTWQEYEASGGKLKLNVPANVSTEQMKVLSDNEKLMDDLGANVTPAIYYMSKENTLQQAVGLPDQKT
type: DOMAIN
name: Thioredoxin-like_fold
description: Thioredoxin-like fold

phrase: VKAIEKQGITIIKTFDAPGGMKGYLGKYQDMGVTIYLTPDGKHAISGYMYNEKGENLS
type: DOMAIN
name: DiS-bond_isomerase_DsbC/G_N
description: Disulphide bond isomerase, DsbC/G, N-terminal
Protein sequence:
MQELEKAVPSSVRVTRQSENLVILEKDLATEQMVLAMGPQHPSTHGVLKLECLTDGEVVTEAEPVLGYLHRCFEKTAENVDYPAVVPFTDRLDYLAAMNSEFAYALTVEKLLDIEIPRRVEFIRILVAELNRIASHLVAIGTYGIDLGAFTPFLFCFRDREIILGLLEWASGARMLYNYVWVGGLAYDVPADFLKRIREFCAYFRPKAKELADLLTSNEIFVKRTHGIGIMPADVAINYGWSGPMLRGSGVEWDLRRNDPYSLYSELDFNVCVPDGKHSVIGDCLSRHLVRAYEMEESLNIIEQCIDKMPSSDGFNSRAAIPKKIRPKAGEVYGRAENPRGELGFYIQSDGKSTKPLRCKARSSCFVNLSAMKDLSKGQLIPDLVAIIGSIDIVLGEVDR

Annotated regions:
phrase: DLGAFTPFLFCFRDREIILGLLEWASGARMLYNYVWVGGLAYDVPADFLKRIREFCAYFRPKAKELADLLTSNEIFVKRTHGIGIMPADVAINYGWSGPMLRGSGVEWDLRRNDPYSLYSELDFNVCVPDGKHSVIGDCLSRHLVRAYEMEESLNIIEQCIDKMPSSDGFNSRAAIPKKIRPKAGEVYGRAENPRGELGFYIQSDGKSTKPLRCKARSSCFVNLSAMKDLSKGQLIPDLVAIIGSIDIVLGEVD
type: DOMAIN
name: NADH_Q_OxRdtase_suD
description: NADH-quinone oxidoreductase, subunit D
Protein sequence:
MEGPAFSKPLKDKINPWGPLIVLGILIRAGVSVQRDSPHQVFNVTWRVTNLMTGQTANATSLLGTMTDAFPKLYFDLCDLIGNDWDETRLGCRTPGEGKRARTFDLYVCPGHTVPTGCGGPREGYCGKWGCETTGQAYWKPSSSWDLISLKRGNTPKDRGPCYDSSVSSGVQGATPGGRCNPLVLKFTDAGKKASWDAPKVWGLRLYRSTGTDPVTRFSLTRQVLNIGPRVPIGPNPVISDQLPPSRPAQIMLPRPPQPPPPGTASIVPETAPPSQQPGTRDRLLNLVNKAYQALNLTSPDKTQECWLCLVSRPPYYEGVAVLGTNSNHTTLISTIMGLLIILLLLLILLLWTLHS

Annotated regions:
Protein sequence:
KASVGFKAGVKDYRLTYYTPDYETKDTDILAAFRVTPQPGVPAEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEAVIGEENQYICYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPAYSKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFVFCAEALYKAQAETGEIKGHYLNATAGTCEEMMKRAVFARELGAPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKGLRMSGGDHIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRSRGIFFTQDWVSMPGVIPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNEIIREAAKWSPELA

Annotated regions:
phrase: GLDFTKDD
type: ACTIVE_SITE
name: RuBisCo_large_chain_AS
description: Ribulose bisphosphate carboxylase, large chain, active site

phrase: YYTPDYETKDTDILAAFRVTPQPGVPAEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEAVIGEENQYICYVAYPLDLFEEGSVTNMFTSIVGNVFGFKALRALRLEDLRIPPA
type: DOMAIN
name: RuBisCO_lsu_fd_N
description: Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal

phrase: GIQVERDKLNKYGRPLLGCTIKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFVFCAEALYKAQAETGEIKGHYLNATAGTCEEMMKRAVFARELGAPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAVIDRQKNHGMHFRVLAKGLRMSGGDHIHAGTVVGKLEGEREITLGFVDLLRDDFIEKDRSRGIFFTQDWVSMPGVIPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVANRVALEACVQARNEGRDLAREGNEIIREAAKWSPEL
type: DOMAIN
name: RuBisCO_lsu_C
description: Ribulose bisphosphate carboxylase, large subunit, C-terminal
Protein sequence:
MVEKRNIRKCTGKEISDFLEQQGEKAFRTKQIWQWLWQRGVTRFEDMTNLSKNTRELLDKYFVIKTIALTHIQKSNDGTTKLGFTLDDGQLIESVLIPSRDKATACVSSQAGCKLKCSFCATGGLGFTRDLQPEEIFDQVVAVKKMAEERGLIFSNIVFMGMGEPLLNYDNVMEAIQKITSEEGLAMSPYRITLSTSGIPEGIKRLADDQVRFNLAISLHSAINSTRNQIMPINKAYPLPQLAEAIKYFVEKTGTRPTFEYLLLKGINDSLEAAKALASFCRQFPVKINIIEYNQVEGAKYQHSPAENRDSFIRFLESKNIVVNLRHSKGKDIDAACGQLANKNQ

Annotated regions:
phrase: SRDKATACVSSQAGCKLKCSFCATGGLGFTRDLQPEEIFDQVVAVKKMAEERGLIFSNIVFMGMGEPLLNYDNVMEAIQKITSEEGLAMSPYRITLSTSGIPEGIKRLADDQVRFNLAISLHSAINSTRNQIMPINKAYPLPQLAEAIKYFVEKTGTRPTFEYLLLKGINDSLEAAKALASFCRQFPVKINIIEYNQVEGAKYQHSPAENRDSFIRFLESKNIVVNLRHSKGK
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: ATACVSSQAGCKLKCSFCATGGLGFTRDLQPEEIFDQVVAVKKMAEERGLIFSNIVFMGMGEPLLNYDNVMEAIQKITSEEGLAMSPYRITLSTSGIPEGIKRLADDQVRFNLAISLHSAINSTRNQIMPINKAYPLPQLAEAIKYFVEKTGTRPTFEYLLLKGINDSLEAAKALASFCRQFPVKINIIEYNQVEGAKYQHSPAENRDSFIRFL
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: SSQAGCKLKCSFCATGGLGFTRDLQPEEIFDQVVAVKKMAEERGLIFSNIVFMGMGEPLLNYDNVMEAIQKITSEEGLAMSPYRITLSTSGIPEGIKRLADDQVRFNLAISLHSAINSTRNQIMPINKAYPLPQLAEAIKYFVEKTGTRPTFEYLLLKGIND
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: NIRKCTGKEISDFLEQQGEKAFRTKQIWQWLWQRGVTRFEDMTNLSKNTRELLDKYFV
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain