nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MAESAKLLFYNKVIDGTAIKQFIGRLVAHFGITYTAHILDQLKTLGFQQATYAATSLGIDDLLTAPSKGWLIQDAEHHSYTLEKHHRYGNVHAVEKLRQLIETWYATSEYLKQEMNPNFRMTDPLNPVHMMSFSGARGSASQVHQLVGMRGLVSDPQGQIIDLPIKSNFREGLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRKTDCNTFRGISLNSTEDKKKNLQIFTQQKLVGRVLADNLYINARCLAIRNQDINTNLIEKLITLKTPLISIRSPLTCKSMLWICQLCYGWSLTHYGDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGDIAEHVRTPFNGTIEFDTDLVYPTRTRHGHPAWVCRTDLAVTIKSQNKIHNLIIPSQSLLLIQNNQYVESKQLIAEVHAKVSPFKEKVQKYIYCNIEGEMHWSKRVRHASKYLHSNVHLIFNTGHLWILSGSSHEDKTSSMFFKNQDQINTKFFISPRKILFMKKTNQVNSKNLDPYLEKEMETLNYSNLYLGILNKSRNFVYPSIILHDYEVKRIYDEKKGENFLLLEERHGEKKTQIFRRFVLNIPKSGILENKDIFAISNDPGYGIQSPGIIKYGTIKVNPIKGKGETFKNRETKILRLRPRYQVIEPGNFFPIPEEVHILYESFPPILVRNDSLIKKNTQITSDIRSQVGGLVRIRRKMNDSYEVKVLPGRVYHPEERRNISKQNDILVPPGEEISNKFQSENWLYLEWITPPKE

Annotated regions:
phrase: GLSLTEYIISCYGARKGVVDTAVRTSDAGYLTRRLVEVVQHIVVRKTDCNTFRGISLNSTEDKKKNLQIFTQQKLVGRVLADNLYINARCLAIRNQDINTNLIEKLITLKTPLISIRSPLTCKSMLWICQLCYGWSLTHYGDLVELGEAVGIIAGQSIGEPGTQLTLRTFHTGGVFTGDIAEHVRTPFNGTIEFDTDLVYPTRTRHGHPAWVCRTDLAVTIKSQNKIHNLIIPSQSLLLIQNNQYVESKQLIAEVHAKVSPFKEKVQKYIYCNIEGEMHWSKRVRHASKYLHSNVHLIFNTGHLWILSGSSHEDKTSSMFFKNQDQINTKFFISPRKILFMKKTNQVNSKN
type: DOMAIN
name: RNA_pol_Rpb1_5
description: RNA polymerase Rpb1, domain 5

phrase: AVEKLRQLIETWYATSEYLKQEMNPNFRMTDPLNPVHMMSFSGARGSASQVHQLVGMRGLVSDPQGQIIDLPIKSNF
type: DOMAIN
name: RNA_pol_Rpb1_4
description: RNA polymerase Rpb1, domain 4
Protein sequence:
MMRAFDGDKLVLASHNKGKLREIAELMEPFGIEVISAGELGFEEPEETEDTFAGNARIKAHFAAKSSGLPALSDDSGLAVDGLDGAPGVYSADWAETPNGRDFAMAMQKVWDRLEETNAAEPRTARFCCTLCLAWPDGHDEIFEGTVEGRIVWPARGPHGFGYDPMFLPDGETETFGEMDHARKQAMSHRADAFHKLVSGPFKDLNT

Annotated regions:
Protein sequence:
MNRIGILSRSDGSSEWKQGSARVICGVNGPIDVKIRDERLNKATVEVLVQPVSGVAETLEKMISSRIVGILEDAIFLNTYPRTLIQVSIQIIEEDGTDTLAAVINGAVLALLDAGISLKYIPCAINCHWKNKITQDEPDVDGTINKLESIITICYSISSEPAKLIFLETAGPIPEEDFFRVLETAPLHAEEVSKKMKELLFETYNESDGHENEKNPKEDVEMDVVA

Annotated regions:
phrase: IGILSRSDGSSEWKQGSARVICGVNGPIDVKIRDERLNKATVEVLVQPVSGVAETLEKMISSRIVGILEDAIFLNTYPRTLIQVSIQIIEEDGTDTLAAVINGAVLALLDAG
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1
Protein sequence:
MSALKDVDQLTEAEARAEHARLAREIAGHDKAYYQSDAPKISDAAYDALRRKLEAIEVRFPQFIDLLSPTQRVGAVPSGKFGEIRHAVPMLSLGNAFNDEDVADFVGRIRRFLGLAESDVVAVTAEPKIDGLSASLRYVGGKLVHGATRGDGQTGEDVTQNLLTLDDIPDTLPPGDWPDVVEVRGEVYMSHADFAALNERQIEAGKDAYKNPRNAAAGSLRQIDPKMTSQRPLRFFAYAWGEVSEPLSDTQMGAVARFGEMGFPVNDLMARCETVEALLAVYRDIEARRAGLGYDIDGVVYKADRLDWQERLGFVARAPRWAIAHKFPAEQATTILEAIDIQVGRTGALTPVARLTPVTVGGVVVTNATLHNQDEIERKDIRVGDTVVIQRAGDVIPQVVRVVDPDRPGRGEAFDFPTECPVCGSQALREHDAKTGKLDVVRRCTGGLICGAQLKERLKHFVSRKAFDIEGLGIKQIEAFQEEGLITEPAHIFTLKARNEAGEIKPPLQEREGFGETSIRNLFTSIEDRRTITLARFLNALGIRHVGENTSALFARTYGSWAAFHAAAANLSDEAVRAEMLGIDGIGNAAVEALEQYFTEAHNRDLLDRLVAQLTIEDAEAIANDSPVAGKTVVFTGALERMTRDEAKAKAQALGAKVAGSVSGKTDYLVAGPGAGSKAKKAAELGVETLTEDEWFDLIGA

Annotated regions:
phrase: ECPVCGSQALREHDAKTGKLDVVRRCTGGLICG
type: DOMAIN
name: Znf_DNAligase_C4
description: Zinc-finger, NAD-dependent DNA ligase C4-type

phrase: KIDGLSASLRYVGGKLVHGATRGDGQTGE
type: ACTIVE_SITE
name: DNA_ligase_AS
description: NAD-dependent DNA ligase, active site

phrase: TTILEAIDIQVGRTGALTPVARLTPVTVGGVVVTNATLHNQDEIERKDIRVGDTVVIQRAGDVIPQVVRVVDPDRP
type: DOMAIN
name: NAD_DNA_ligase_OB
description: NAD-dependent DNA ligase, OB-fold

phrase: PVAGKTVVFTGALERMTRDEAKAKAQALGAKVAGSVSGKTDYLVAGPGAGSKAKKAAELGVETLTEDEWFDL
type: DOMAIN
name: BRCT_dom
description: BRCT domain

phrase: VGRTGALTPVARLTP
type: CONSERVED_SITE
name: DNA_ligase_CS
description: NAD-dependent DNA ligase, conserved site

phrase: DSPVAGKTVVFTGALERMTRDEAKAKAQALGAKVAGSVSGKTDYLVAGPGAGSKAKKAAELGVETLTEDEWFDLI
type: DOMAIN
name: BRCT_dom
description: BRCT domain

phrase: AEHARLAREIAGHDKAYYQSDAPKISDAAYDALRRKLEAIEVRFPQFIDLLSPTQRVGAVPSGKFGEIRHAVPMLSLGNAFNDEDVADFVGRIRRFLGLAESDVVAVTAEPKIDGLSASLRYVGGKLVHGATRGDGQTGEDVTQNLLTLDDIPDTLPPGDWPDVVEVRGEVYMSHADFAALNERQIEAGKDAYKNPRNAAAGSLRQIDPKMTSQRPLRFFAYAWGEVSEPLSDTQMGAVARFGEMGFPVNDLMARCETVEALLAVYRDIEARRAGLGYDIDGVVYKADRLDWQERLGFVARAPRWAIAHKFP
type: DOMAIN
name: DNAligase_adenylation
description: NAD-dependent DNA ligase, adenylation

phrase: EARAEHARLAREIAGHDKAYYQSDAPKISDAAYDALRRKLEAIEVRFPQFIDLLSPTQRVGAVPSGKFGEIRHAVPMLSLGNAFNDEDVADFVGRIRRFLGLAESDVVAVTAEPKIDGLSASLRYVGGKLVHGATRGDGQTGEDVTQNLLTLDDIPDTLPPGDWPDVVEVRGEVYMSHADFAALNERQIEAGKDAYKNPRNAAAGSLRQIDPKMTSQRPLRFFAYAWGEVSEPLSDTQMGAVARFGEMGFPVNDLMARCETVEALLAVYRDIEARRAGLGYDIDGVVYKADRLDWQERLGFVARAPRWAIAHKFPAEQATTILEAIDIQVGRTGALTPVARLTPVTVGGVVVTNATLHNQDEIERKDIRVGDTVVIQRAGDVIPQVVRVVDPDRPGRGEAFDFPTECPVCGSQALREHDAKTGKLDVVRRCTGGLICGAQLKERLKHFVSRK
type: DOMAIN
name: DNAligase_N
description: NAD-dependent DNA ligase, N-terminal

phrase: KFGEIRHAVPMLSLGNAFNDEDVADFVGRIRRFLGLAESDVVAVTAEPKIDGLSASLRYVGGKLVHGATRGDGQTGEDVTQNLLTLDDIPDTLPPGDWPDVVEVRGEVYMSHADFAALNERQIEAGKDAYKNPRNAAAGSLRQIDPKMTSQRPLRFFAYAWGEVSEPLSDTQMGAVARFGEMGFPVNDLMARCETVEALLAVYRDIEARRAGLGYDIDGVVYKADRLDWQERLGFVARAPRWAIAHKFPA
type: DOMAIN
name: DNAligase_adenylation
description: NAD-dependent DNA ligase, adenylation

phrase: ANDSPVAGKTVVFTGALERMTRDEAKAKAQALGAKVAGSVSGKTDYLVAGPGAGSKAKKAAELGVETLTEDEW
type: DOMAIN
name: BRCT_dom
description: BRCT domain

phrase: RFLNALGIRHVGENTSALFARTYGSWAAFHAAAANLSDEAVRAEMLGIDGIGNAAVEALEQYFTEAHNRD
type: DOMAIN
name: DisA/LigA_HHH
description: DisA/LigA, helix-hairpin-helix motif
Protein sequence:
MRGAAPAAVLGQGQACGRCLRSPVTEEAPGPPRRPEALRQELRCSRGARCSSELAPARPSAAGVAGLPAAAAAPRSPAPLLLLLFPSQYESSKAGKRLERSEGSFPAAGRLAGLLLTLSASELYQRVKGFGGSLSDAAALNILGLSRPAQDRLLRSYFSEAGIEYNLVRLPMGCSDFSERPYSYADIPHDYELRHFKLAEEDTRMKASIPILHRASAMSKRPLSLYASPWTAPAWMKSNGDIRGKGSLKGQAGDKYHRAWASYFVKFLDEYAKRNVTFWAVTAQNEPLATLLAPAKLPTVIFTAVQQRDFILRNLGPALAQSAHRTRIIILDDQRIHLPAWAQVVLGNASAARYVAGVGVHWYLDALVPARSSLEATHRLFPRHLLLYTEACSGFLTLRFAVALGCWERGDRYSHSILSVRHPPVPPRGAGRQPRPRSAPPLLPGPEPLRGGLDRLEPGAGPAGGPQLGQELRGQPHHCGPQQGRLLQAAHVLPPGALQVGWGQRWACVGQPGGPETLPSAMCPVWGSQPRSGMLLWGGGAGAAAGCCSTRSSPRSKFIPEGSRRVGLASSRKCPLCDLEHVALLRPDGAAVLVVLNR

Annotated regions:
phrase: GSRRVGLASSRKCPLCDLEHVALLRPDGAAVLVVLN
type: DOMAIN
name: GH30_C
description: Glycosyl hydrolase family 30, beta sandwich domain

phrase: VKGFGGSLSDAAALNILGLSRPAQDRLLRSYFSEAGIEYNLVRLPMGCSDFSERPYSYADIPHDYELRHFKLAEEDTRMKASIPILHRASAMSKRPLSLYASPWTAPAWMKSNGDIRGKGSLKGQAGDKYHRAWASYFVKFLDEYAKRNVTFWAVTAQNEPLATLLAPAKLPTVIFTAVQQRDFILRNLGPALAQSAHRTRIIILDDQRIHLPAWAQVVLGNASAARYVAGVGVHWYLDALVPARSSLEATHRLFPRHLLLYTEACSGFLTLRFAVALGCWERGDRYSHSIL
type: DOMAIN
name: Glyco_hydro_30_TIM-barrel
description: Glycosyl hydrolase family 30, TIM-barrel domain
Protein sequence:
MTGNTLAIIILAAGQGTRMRSRLPKVLHEIGGRPLVGHVLTTAQRLGADHVEVVVRHERDQVVSALAHDYPDAVFIDQDEIPGTGRAVQVAVDALPDEFDGDVLVLSGDCPLADADTLRAFLEAHRAGQAGATLMTAVVDDPTGYGRVIRDESGGVDRIVEQKDASADEAAVREINAGMYVFRVGVLREYLPTVGVDNAQSEMYLTDVPGMLRRDGSPVAASVVTDVTVTYGVNDRAQLAEVGRLLNQRIVRRWQLEGVTVIDPATTWIDDDATLAPDVTILPNTHILRATKIAEGAIIGPDTTLVDCEVGEDAIVRRSDATLAVIGAEATVGPFSFLRPNTVLGARGKIGAYVETKNAEIGEGSKVPHLSYVGDATIGRGVNLGASTITANYDDVHKHRTVVEDEVHTGSHTTLVAPVRLGAGAKTGAGAVVRKDVPAGSLSMSIAPQRNIEGWVEKNRAGTGAADAAARSRVAE

Annotated regions:
phrase: GVTVIDPATTWIDDDATLAPDVTILPNTHILRATKIAEGAIIGPDTTLVDCEVGEDAIVRRSDATLAVIGAEATVGPFSFLRPNTVLGARGKIGAYVETKNAEIGEGSKVPHLSYVGDATIGRGVNLGASTITANYDDVHKHRTVVEDEVHTGSHTTLVAPVRLGAGAKTGAGAVVRKDVPAGSLSMSIAP
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain

phrase: IILAAGQGTRMRSRLPKVLHEIGGRPLVGHVLTTAQRLGADHVEVVVRHERDQVVSALAHDYPDAVFIDQDEIPGTGRAVQVAVDALPDEFDGDVLVLSGDCPLADADTLRAFLEAHRAGQAGAT
type: DOMAIN
name: MobA-like_NTP_Trfase
description: MobA-like NTP transferase
Protein sequence:
MDIVAHIQGDPGSSLTPLILIHAISGLALPYFALRPLSTDSDDGDSDKSRPVYGLSSPIFESVSAFRRHGKSLPSLALEYVRIIRREIQPRGPYLLGGWSMGGMLAIEMAAIFVAQGETVKHVVMIDSLNPEVYPPFQDSQEHQVLSTIMYNAIAWRVEGLEEACMPTLSDDASTTTSSDNSRASTDHGADSEVESEADLDDFMQQLREHVHQGMRMLASYHTLHRHIYLPDTAVTLIKCTMLGNLSPLLRASRKVFAKKNLLDPHNGWRTEQFRSFRSVPFASTHDACFDAEASEELTTILRGVLKDID

Annotated regions:
phrase: KSLPSLALEYVRIIRREIQPRGPYLLGGWSMGGMLAIEMAAIFVAQGETVKHVVMIDSLNPEVYPPFQDSQEHQVLS
type: DOMAIN
name: Thioesterase
description: Thioesterase
Protein sequence:
MTYGELAAFVTGELGEPAYRAEQIFRWLHGRGVTSVDEMTNVPKPLRARLAERAHIGTLRVDRVQRSRDGTRKLRLVARDGAAIESVLIPDGDKLTQCISSQVGCALDCKFCATATLGLSRNLDAGEIVDQVYRARALLAVEEPGRRITNLVYMGMGEPLHNYDQVVRSLRILTHELGANLSHRRITVSTVGLVPGIDKLGREDFQVNLAVSLNAADDATRARIMPVNKKYPIAALLAAVARYPLDRRRRVTFEYVLIEGVNDSVADAAKLARLLSGMRCKVNLIPWNPHPAAPFRRPSDAAIAAFQNEVKRRGLPAYLRAPRGDDIDAACGQLALRGGDAVVPLSVRA

Annotated regions:
phrase: SSQVGCALDCKFCATATLGLSRNLDAGEIVDQVYRARALLAVEEPGRRITNLVYMGMGEPLHNYDQVVRSLRILTHELGANLSHRRITVSTVGLVPGIDKLGREDFQVNLAVSLNAADDATRARIMPVNKKYPIAALLAAVARYPLDRRRRVTFEYVLIEGVNDSVADAAK
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: MTYGELAAFVTGELGEPAYRAEQIFRWLHGRGVTSVDEMTNVPKPLRARLAERAH
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: DGDKLTQCISSQVGCALDCKFCATATLGLSRNLDAGEIVDQVYRARALLAVEEPGRRITNLVYMGMGEPLHNYDQVVRSLRILTHELGANLSHRRITVSTVGLVPGIDKLGREDFQVNLAVSLNAADDATRARIMPVNKKYPIAALLAAVARYPLDRRRRVTFEYVLIEGVNDSVADAAKLARLLSGMRCKVNLIPWNPHPAAPFRRPSDAAIAAFQNEVKRRGLPAYLRAPRG
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: ELAAFVTGELGEPAYRAEQIFRWLHGRGVTSVDEMTNVPKPLRARLAERAHIGTLRVDRVQRSRDGTRKLRLVARDGAAIESVLIPDGDKLTQCISSQVGCALDCKFCATATLGLSRNLDAGEIVDQVYRARALLAVEEPGRRITNLVYMGMGEPLHNYDQVVRSLRILTHELGANLSHRRITVSTVGLVPGIDKLGREDFQVNLAVSLNAADDATRARIMPVNKKYPIAALLAAVARYPLDRRRRVTFEYVLIEGVNDSVADAAKLARLLSGMRCKVNLIPWNPHPAAPFRRPSDAAIAAFQNEVKRRGLPAYLRAPRGDDIDAACGQLAL
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MKLSMRLISAVLIMFMIFVATGMGPVTVEARTCESQSHRFKGTCVSASNCANVCHNEGFVGGNCRGFRRRCFCTRHC

Annotated regions:
phrase: GTCVSASNCANVCHNEGFVGGNCRGFRRRCFC
type: DOMAIN
name: Scorpion_toxin-like
description: Knottin, scorpion toxin-like

phrase: TCESQSHRFKGTCVSASNCANVCHNEGFVGGNCRGFRRRCFCTRH
type: DOMAIN
name: Scorpion_toxin-like
description: Knottin, scorpion toxin-like
Protein sequence:
MVDLLTGLLPPFVWRLLIIVLQIVAIVLPLLIAVAYLTYAERKVIGAMQLRKGPNVVGPFGLLQPMADGLKLFVKETVLPTSANRVVFVGAPMLTFFLALVAWAVIPFDKGWVLADINVGVLYLFAISSLGVYGIIMAGWASNSKYAFLGGLRSAAQMVSYEVSIGFILISVLLTVGSLNLSDVVTAQSKMWFIVPHFPLFILFIISGLAETNRAPFDLPEAEAELVAGYNVEYSAMTFALFFLGEYANMLMMGAMTSILFLGGWMAPFGLGWLPIPGLIWFVLKICLVMFVFLWVRATFPRYRYDQLMRLGWKVFLPFSLFWLVLTASVLTAFGWLPNQG

Annotated regions:
phrase: GLLQPMADGLKLFVK
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_su1_CS
description: NADH:ubiquinone oxidoreductase, subunit 1, conserved site

phrase: PFDLPEAEAELVA
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_su1_CS
description: NADH:ubiquinone oxidoreductase, subunit 1, conserved site
Protein sequence:
MFSRLRAVTTPCTLTCRRVHLKEKGKPLMLNPRTNKGMAFTLQERQMLGLQGLLPPKIETQDIQALRFHRNLKKMTSPLEKYIYIMGIQERNEKLFYRILQDDIESLMPIVYTPTVGLACCQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIQPEKCLPVCIDVGTDNMALLKDPFYMGLYQKRDRSQLYDDLMDEFMKAITDRYGRNTLIQFEDFGNHNAFRFLRKYQQKYCTFNDDIQGTAAVALSGLLAAQRVINKPVSEHKILFLGAGEAALGIANLIVLSMVESGLSEEEAQRKIWMFDKSGLLVKGRTASIDSNQEPYAHAAPESIPATFEDAVNKLKPSVIIGVAGAGPLFTHGVIKAMASINERPIIFALSNPTAQAECTAEDAYTLTEGRCLFASGSPFEPVKLQDGRVFTPGQGNNAYIFPGVALAVILCEARHISDTVFLEAAKALTTQLTDAELAQGRLYPSLANIQEVSANIAIKLAEYLYANKMAFRYPEPEDKARYVRERIWRSNYVSLLPDVYDWPESSLTPPQITEEKLPH

Annotated regions:
phrase: QERNEKLFYRILQDDIESLMPIVYTPTVGLACCQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIQPEKCLPVCIDVGTDNMALLKDPFYMGLYQKRDRSQLYDDLMDEFMKAITDRYGRNTLIQFEDFGNHNAFRFLRKY
type: DOMAIN
name: Malic_N_dom
description: Malic enzyme, N-terminal domain

phrase: IQGTAAVALSGLLAAQRVINKPVSEHKILFLGAGEAALGIANLIVLSMVESGLSEEEAQRKIWMFDKSGLLVKGRTASIDSNQEPYAHAAPESIPATFEDAVNKLKPSVIIGVAGAGPLFTHGVIKAMASINERPIIFALSNPTAQAECTAEDAYTLTEGRCLFASGSPFEPVKLQDGRVFTPGQGNNAYIFPGVALAVILCEARHISDTVFLEAAKALTTQLTDAELAQGRLYPSLANIQEVSANIAIKLAEYL
type: DOMAIN
name: Malic_NAD-bd
description: Malic enzyme, NAD-binding

phrase: FNDDIQGTAAVALSGL
type: CONSERVED_SITE
name: Malic_enzyme_CS
description: Malic enzyme, conserved site

phrase: QERNEKLFYRILQDDIESLMPIVYTPTVGLACCQYGHIFRRPKGLFISISDRGHVRSIVDNWPENHVKAVVVTDGERILGLGDLGVYGMGIPVGKLCLYTACAGIQPEKCLPVCIDVGTDNMALLKDPFYMGLYQKRDRSQLYDDLMDEFMKAITDRYGRNTLIQFEDFGNHNAFRFLRKY
type: DOMAIN
name: Malic_N_dom
description: Malic enzyme, N-terminal domain

phrase: IQGTAAVALSGLLAAQRVINKPVSEHKILFLGAGEAALGIANLIVLSMVESGLSEEEAQRKIWMFDKSGLLVKGRTASIDSNQEPYAHAAPESIPATFEDAVNKLKPSVIIGVAGAGPLFTHGVIKAMASINERPIIFALSNPTAQAECTAEDAYTLTEGRCLFASGSPFEPVKLQDGRVFTPGQGNNAYIFPGVALAVILCEARHISDTVFLEAAKALTTQLTDAELAQGRLYPSLANIQEVSANIAIKLAEY
type: DOMAIN
name: Malic_NAD-bd
description: Malic enzyme, NAD-binding
Protein sequence:
MGVKNLWDILESCKKKLPLHHLQNKKVCVDLSCWLVQMYSANRSPAFAKDKVYLKNLFHRIRALLALNCTLLFVTDGAIPSLKLATYRRRLGSISHAAKESDQPNSHPSISLRRNKGSEFSCMIKEAKRLGMALGIPCLDGLEEAEAQCASLDLESLCDGCFTSDSDAFLFGARTVYRDVFIGEGGYVICYEMEDIEKTLGFGRNSLISLAVLLGSDYSNGVNGFGPETACRLVKSVGDNLILDQILSNGVKATRKCKGKNSGNKVDDMCPKASSCEVGMTQDSDGQFRDVINAYLEPKCHSPDSEAVQRVCGQHPFLRPQLQKICEEYFDWSPEKTDQYILPKIAERELRRFSDLRSASSALGIKPLLSEIPVPCPVLAIVKQRKVHGNECYEVSWRNIEGLQVSVVPGDLVKSACPEKITEFLEKKGEEKKQKRRARPKKSGQAAVKDVDEQLQELLLGIEADSGGILGATASVCQTLTAAYTVAVEDVVDLSSPSPPLRKLSKSQKKMMAEDVNVAGMNMNKMESESSFSTQSSTSDVDNQLIDLSSPLAGGDNGMKGGRRALADISNVGSHSTETDGGGGGGGGVASVGHGTTIDLSSPSPAIGDRSRVHHDDDDVIHERKARDLRMFLDSIRNELY

Annotated regions:
phrase: MGVKNLWDILESCKKKLPLHHLQNKKVCVDLSCWLVQMYSANRSPAFAKDKVYLKNLFHRIRALLALNCTLLFVTDGAIPSLKLATYRRRLGSISHA
type: DOMAIN
name: XPG_DNA_repair_N
description: XPG, N-terminal

phrase: GIPCLDGLEEAEAQCASLDLESLCDGCFTSDSDAFLFGARTVYRDVFIGEGGYVICYEMEDIEKTLGFGRNSLISLAVLLGS
type: DOMAIN
name: XPG-I_dom
description: XPG-I domain

phrase: MALGIPCLDGLEEAEAQCASLDLESLCDGCFTSDSDAFLFGARTVYRDVFIGEGGYVICYEMEDIEKTLG
type: DOMAIN
name: XPG-I_dom
description: XPG-I domain

phrase: MGVKNLWDILESCKKKLPLHHLQNKKVCVDLSCWLVQMYSANRSPAFAKDKVYLKNLFHRIRALLALNCTLLFVTDGAIPSLKLATYRR
type: DOMAIN
name: XPG_DNA_repair_N
description: XPG, N-terminal

phrase: RNSLISLAVLLGSDYSNGVNGFGPETACRLVKS
type: CONSERVED_SITE
name: HhH2
description: Helix-hairpin-helix motif, class 2
Protein sequence:
MFKTAFLDLPPLAAAAGSVRLPGSKSISNRVLLLAGLAEGTTEVYDLLDSDDTRVMLAALEQLGCTLERSGSVLRVTGLGGRLKVTQAELFLGNAGTAMRPLTAALAVLAATQGGRFRLSGVARMHERPIGDLVDALRQLGCPVTELGQPGFPPLQVGSGAAGALDTATPIRVRGDVSSQFLTALLLALPLVSQHHPVAIEVMGELISKPYIDITLRLLERFGITVQRDGYQRFVIPQGSAYRTPGRIHVEGDASSASYFVALGALAATEHPIRIEGVGLNAIQGDIRFVEAAQAMGAQVQGGDGWLEVRRGRWPLKGITLDCNHIPDAAMTLGVMALYADSPTRLTNIASWRVKETDRIAAMACELRKLGAQVIEGPDFIEVAPLQHWQSASIHTYDDHRMAMCLSLAAFNPLAGAQPSVSVRIEDPRCVAKTFPDYFETLFSVVTAAPGAIPVLTVDGPTASGKGTLAAELAQALGYHLLDSGALYRATALAALQGGVALSDGPAVAGIAATLDIRFEGETVWLAGQDVSAALRLESTGGLASQVSVHPGVRHALHALQLSFQRLPGLVADGRDMGTVVFPQADLKVFLTASAEKRAERRYKQLIAKGISANIDSLLLDLQARDERDKNRSAAPLKPAEDALLLDNSDLSIDASVEQVLSWWQQRKAPKVSG

Annotated regions:
phrase: AGSVRLPGSKSISNRVLLLAGLAEGTTEVYDLLDSDDTRVMLAALEQLGCTLERSGSVLRVTGLGGRLKVTQAELFLGNAGTAMRPLTAALAVLAATQGGRFRLSGVARMHERPIGDLVDALRQLGCPVTELGQPGFPPLQVGSGAAGALDTATPIRVRGDVSSQFLTALLLALPLVSQHHPVAIEVMGELISKPYIDITLRLLERFGITVQRDGYQRFVIPQGSAYRTPGRIHVEGDASSASYFVALGALAATEHPIRIEGVGLNAIQGDIRFVEAAQAMGAQVQGGDGWLEVRRGRWPLKGITLDCNHIPDAAMTLGVMALYADSPTRLTNIASWRVKETDRIAAMACELRKLGAQVIEGPDFIEVAPLQHWQSASIHTYDDHRMAMCLSLAAFNPLAGAQPSVSVRIEDPRCVAKTFPDYFET
type: DOMAIN
name: Enolpyruvate_Tfrase_dom
description: Enolpyruvate transferase domain

phrase: RVKETDRIAAMACELRKL
type: CONSERVED_SITE
name: EPSP_synthase_CS
description: 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site

phrase: VLTVDGPTASGKGTLAAELAQALGYHLLDSGALYRATALAALQGGVALSDGPAVAGIAATLDIRFEGETVWLAGQDVSAALRLESTGGLASQVSVHPGVRHALHALQLSFQRLPGLVADGRDMGTVVFPQADLKVFLTASAEKRAERRYKQLIAKGISANIDSLLLDLQARDERDKNRSAAPLKPAEDALLLDN
type: DOMAIN
name: Cytidylate_kinase_dom
description: Cytidylate kinase domain

phrase: TVDGPTASGKGTLAAELAQALGYHLLDSGALYRATALAALQGGVALSDGPAVAGIAATLDIRFEGETVWLAGQDVSAALRLESTGGLASQVSVHPGVRHALHALQLSFQRLPGLVADGRDMGTVVFPQADLKVFLTASAEKRAERRYKQLIAKGISANIDSLLLDLQARDERDKNRSAAPLKPAEDALLLDNSDLSIDASVEQVLS
type: DOMAIN
name: Cytidylate_kinase_dom
description: Cytidylate kinase domain

phrase: LFLGNAGTAMRPLT
type: CONSERVED_SITE
name: EPSP_synthase_CS
description: 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site
Protein sequence:
MRVRGMLRNWQQWMIWGILGFCSVWGNLWVTVYYGVPVWKEAKTTLFCASDAKAYEKEVHNIWATHACVPTNPDPQELVLENVTENFNMWKNDMVDQMHEDIISLWDESLKPCVKLTPLCVTLNCSNNINVNKTDIATNQSFNQSLGNITEEMKNCSFNTTTELIDKKQQVYALFYKLDIVPLESKDNDSSREYRLINCNVSSITQACPKVSFDPIPIHYCAPAGFAILKCNNKTFNGTGPCHNVSTVQCTHGIKPVVSTQLLLNGSLAEEEIIIRSQNLTNNAKTIIVHLNQSVEINCTRPGNNTRKGVRLGPGRAYLIDRIVGDIRQAYCNISEEVWNRTLQAVGRKLKEHFPNSTISFNSSSGGDLEVTTHSFNCGGEFFYCNTSQLFNSAYNPTYNGTKGNGTITIPCRIKQVINMWQKVGKAIYAPPIAGYITCRSNITGLLLSRDGGNDNATERTETFRPAGGDMRDNWRSELYKYKVVEIKPLGIAPTEAKRRVVERQKRAVGIGIGAVILGLLAVAGSTMGAASMTLTVQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQARVLAIERYLKDQQLLGIWGCSGKLICTTNVPWNSTWSNKTKQEIWGNMTWMQWEREIDNYTETIYQLLEESQNQQERNEQDLLALDKWDSLWNWFSITNWLWYIKIFIMIIGGLIGLRIIFAVLSIVNRVRQGYSPLSFQTLIPNPRGPDRLGGIEEEGGEQDNNRSVRLVSGFLSLAWDDLRSLCLFSYHR

Annotated regions:
phrase: VQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQARVLAIERYLKDQQLLGIWGCSGKLICTTNVPWNSTWSNKTKQEIWGNMTWMQWEREIDNYTETIYQLLEESQNQQERNEQDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASMTLTVQARQLLSGIVQQQSNLLRAIEAQQHMLQLTVWGIKQLQARVLAIERYLKDQQLLGIWGCSGKLICTTNVPWNSTWSNKTKQEIWGNMTWMQWEREIDNYTETIYQLLEESQNQQERNEQDLLALDKWDSLWNWFSITNWLWYIKIFIMIIGGLIGLRIIFAVLSIVNRVRQGYSPLSFQT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWKEAKTTLFCASDAKAYEKEVHNIWATHACVPTNPDPQELVLENVTENFNMWKNDMVDQMHEDIISLWDESLKPCVKLTPLCVTLNCSNNINVNKTDIATNQSFNQSLGNITEEMKNCSFNTTTELIDKKQQVYALFYKLDIVPLESKDNDSSREYRLINCNVSSITQACPKVSFDPIPIHYCAPAGFAILKCNNKTFNGTGPCHNVSTVQCTHGIKPVVSTQLLLNGSLAEEEIIIRSQNLTNNAKTIIVHLNQSVEINCTRPGNNTRKGVRLGPGRAYLIDRIVGDIRQAYCNISEEVWNRTLQAVGRKLKEHFPNSTISFNSSSGGDLEVTTHSFNCGGEFFYCNTSQLFNSAYNPTYNGTKGNGTITIPCRIKQVINMWQKVGKAIYAPPIAGYITCRSNITGLLLSRDGGNDNATERTETFRPAGGDMRDNWRSELYKYKVVEIKPLGIAPTEAKRRVVERQK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MPENLEIRPSSFENFIGQKKLVETLQILISSSQKRKQSLDHILFYGPPGTGKTTLANIVANVLEAKIKYVQGPLLEKKSDVLAVLANISPDTIIFIDEIHGINKNIEELLYSAMEEFVIDLQIGVDGERKIMRMKLPQFTLIGASTKLAQISTPLQNRFGYVAKIVDYTLEDMIQIIRNSSAVLKLKMNTEIIKYIASFSNNTPRIANNLLKRIRDFALVLNAKRIDKDIVNKTFDSIGIYNQGLSQINIEYLNLLVKIFKGKSVALDVIANVLKEHRQTIINIIEPPLIEKELIEKTSRGRRITKKGRDYLLELKTN

Annotated regions:
phrase: YTLEDMIQIIRNSSAVLKLKMNTEIIKYIASFSNNTPRIANNLLKRIRDFALVLNAKRIDKDIVNKTFDSI
type: DOMAIN
name: AAA_lid_4
description: RuvB, AAA lid domain

phrase: QGLSQINIEYLNLLVKIFKGKSVALDVIANVLKEHRQTIINIIEPPLIEKELIEKTSRGRRITKKGRDY
type: DOMAIN
name: RuvB_C
description: RuvB C-terminal winged helix domain

phrase: SLDHILFYGPPGTGKTTLANIVANVLEAKIKYVQGPLLEKKSDVLAVLANISPDTIIFIDEIHGINKNIEELLYSAMEEFVIDLQIGVDGERKIMRMKLPQFTLIGASTKLAQISTPLQNRFGYVAKIVDY
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: IRPSSFENFIGQKKLVETLQILISSSQKRKQSLDHILFYGPPGTGKTTLANIVANVLEAKIKYVQGPLLEKKSDVLAVLANISPDTIIFIDEIHGINKNIEELLYSAMEEFVIDLQIGVDGERKIMRMKLPQFTLIGASTKLAQISTPLQNRFGYVA
type: DOMAIN
name: RuvB-like_N
description: RuvB-like P-loop domain
Protein sequence:
MSQTKQTFSTELGGRPLTIEIGQLAKQANGAALIRYGETAVLATVVASKQPKDLDFFPLTVNYEEKLYAAGKIPGGFLKREGRPGENAILTSRLIDRPIRPLFPDGFRHDIQVATTVLSSDEDNSPEVAAMIGASIALSISDIPFDGPIAGVTIGRVNGEFIINPTMSQASESDIDLQVAGTKHAVNMVEAGAKEVSEQAMLEAILLGHDVIKELIAFQEEIVAAVGQEKFAYTVASFDETLVNRLKAEALAEVTTAVQVEEKQARDLAINEVISKYIDQYAADDSITEAQLAEVSGVLNKFVKTEVRRLITEDKVRPDGRGLAEIRPLDSEIGLLPRAHGSGLFTRGQTQVLSVATLGVAGDAQIIDGLGLKAEKRFMHHYNFPPFSVGEARPMRAPGRREIGHGALGERALLPVLPSETDFPYTIRLVSEVLESNGSSSQASICGSILAMMDAGVPLKAPVAGIAMGLIKEGENYSILTDIQGMEDHLGDMDFKVAGTKDGVTALQMDMKIGGITRQILEEALEQARLGRLHILEHMNSVIAEPRVELSKYAPKIVTLKINPDKIRDVIGPGGKVINGIIDETGVKIDIDQDGTVFIASTDQDGINHARQLIEDIVREVVIGEEFDGTVRRVEKFGAFVELFKGKDALVHISELALERVGQTEDVVKLGDKLKVRVTEVDDKGRVNASHKVLLVEGMSPEDRAAYDEKKKTERDSRPPRRDTGSRPPRDGQRPPRRN

Annotated regions:
phrase: VIGEEFDGTVRRVEKFGAFVELFKGKDALVHISELALERVGQTEDVVKLGDKLKVRVTEVDDKGRVNASH
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: GEEFDGTVRRVEKFGAFVELFKGKDALVHISELALERVGQTEDVVKLGDKLKVRVTEVDDKGRVNASH
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: GRPLTIEIGQLAKQANGAALIRYGETAVLATVVASKQPKDLDFFPLTVNYEEKLYAAGKIPGGFLKREGRPGENAILTSRLIDRPIRPLFPDGFRHDIQVATTVLSSDEDNSPEVAAMIGASIALSISDI
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1

phrase: EIRPLDSEIGLLPRAHGSGLFTRGQTQVLSVATLGVAGDAQIIDGLGLKAEKRFMHHYNFPPFSVGEARPMRAPGRREIGHGALGERALLPVLPSETDFPYTIRLVSEVLESNGSSSQASICGSILAMMDAGV
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1

phrase: APKIVTLKINPDKIRDVIGPGGKVINGIIDETGVKIDIDQDGTVFIASTDQDGINHARQLIEDIV
type: DOMAIN
name: KH_dom
description: K Homology domain

phrase: LVNRLKAEALAEVTTAVQVEEKQARDLAINEVISKYIDQYAADDSITEAQLAEVSGVLNKFVKTEVRRLITEDKVRPDG
type: DOMAIN
name: PNPase_PH_RNA-bd_bac/org-type
description: Polyribonucleotide nucleotidyltransferase, RNA-binding domain

phrase: GPIAGVTIGRVNGEFIINPTMSQASESDIDLQVAGTKHAVNMVEAGAKEVSEQAMLEAILLGH
type: DOMAIN
name: ExoRNase_PH_dom2
description: Exoribonuclease, phosphorolytic domain 2

phrase: PVAGIAMGLIKEGENYSILTDIQGMEDHLGDMDFKVAGTKDGVTALQMDMKIGGITRQILEEALEQ
type: DOMAIN
name: ExoRNase_PH_dom2
description: Exoribonuclease, phosphorolytic domain 2

phrase: IGEEFDGTVRRVEKFGAFVELFKGKDALVHISELALERVGQTEDVVKLGDKLKVRVTEVDDKGRVNAS
type: DOMAIN
name: S1_domain
description: S1 domain

phrase: VTLKINPDKIRDVIGPGGKVINGIIDETGVKIDIDQDGTVFIASTDQDGINHARQLIE
type: DOMAIN
name: KH_dom_type_1
description: K Homology domain, type 1
Protein sequence:
MILKEILHSLDQYELTGADNRKLYGLTHNSRKSSSSNNVFFAIQGTHADGHEFISHAISNKADIIFHEKKLDSYANHVSYVLVENTKQVLGLICNIFFEYPLENVKVIAVTGTNGKTSVANYTYQALLGLGYKPLLLSTAGDYFEKKTIALNREAPSTLETIEFFKVAQQYKEKGVTHICLEATSQALDQNRLAGISIDCAVFTNLEKDHLDYHLTMNHYAASKRKLFDLIKEGGTVVANKDDDYYEFMTGILSESSVLSVSSQKEADVHYSIKKQAVEGMSLTINNATFSVNVFGSFNAINIALVYGVLYSLGQKTDKIIYTLSSLSSVPGRAEIIPNDKGVLALVDYAHSADAVKNFLHSLHTIQHRKIITVLGCGGDRDPGKRPYMAEAAVTEADVAIFTQDNPRTENPDQIFRDMIQNLDKESYLVIHDREEAIAAAVRMALPNDIITILGKGHEDYQIIGKKKINFDDRKILKKYLES

Annotated regions:
phrase: GRAEIIPNDKGVLALVDYAHSADAVKNFLHSLHTIQHRKIITVLGCGGDRDPGKRPYMAEAAVTEADVAIFTQDNPRTENPDQIFRDMIQNLDKESYLVIHDREEAIAAAVRMALPNDIITILGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: VTGTNGKTSVANYTYQALLGLGYKPLLLSTAGDYFEKKTIALNREAPSTLETIEFFKVAQQYKEKGVTHICLEATSQALDQNRLAGISIDCAVFTNLEKDHLDYHLTMNHYAASKRKLFDLIKEGGTVVANKDDDYYEFMTGILSESSVLSVSSQKEADVHYSIKKQAVEGMSLTINNATFSVNVFGSFNAINIALVYG
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: LYGLTHNSRKSSSSNNVFFAIQGTHADGHEFISHAISNKADIIFHEKKLDSYANHVSYVLVENTKQVLGLIC
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain
Protein sequence:
MTELIDGKALSQKMQAELGRKVERLKEQHGIIPGLAVILVGDNPASQVYVRNKERSALEAGFKSETLRLSESISQEELIDIIHQYNEDKSIHGILVQLPLPQHINDKKIILAIDPKKDVDGFHPMNTGHLWSGRPMMVPCTPAGIMEMFREYHVDLEGKHAVIIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLSEVTKEADILIVAIGQGHFVTKDFVKEGAVVIDVGMNRDENGKLIGDVVFEQVAEVASMITPVPGGVGPMTITMLLEQTYQAALRSVSL

Annotated regions:
phrase: PKKDVDGFHPMNTGHLWSGRPMMVPCTPAGIMEMFREYHVDLEGKHAVIIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLSEVTKEADILIVAIGQGHFVTKDFVKEGAVVIDVGMNRDENGKLIGDVVFEQVAEVASMITPVPGGVGPMTITMLLEQTYQA
type: DOMAIN
name: THF_DH/CycHdrlase_NAD-bd_dom
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain

phrase: QEELIDIIHQYNEDKSIHGILVQLP
type: CONSERVED_SITE
name: THF_DH/CycHdrlase_CS
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site

phrase: HPMNTGHLWSGRPMMVPCTPAGIMEMFREYHVDLEGKHAVIIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLSEVTKEADILIVAIGQGHFVTKDFVKEGAVVIDVGMNRDENGKLIGDVVFEQVAEVASMITPVPGGVGPMTITMLLEQTYQAAL
type: DOMAIN
name: THF_DH/CycHdrlase_NAD-bd_dom
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain

phrase: IDGKALSQKMQAELGRKVERLKEQHGIIPGLAVILVGDNPASQVYVRNKERSALEAGFKSETLRLSESISQEELIDIIHQYNEDKSIHGILVQLPLPQHINDKKIILAIDPKKDV
type: DOMAIN
name: THF_DH/CycHdrlase_cat_dom
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain

phrase: PGGVGPMT
type: CONSERVED_SITE
name: THF_DH/CycHdrlase_CS
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site