nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MPSGVMPHLEATVAASTPSLPALADLDPATLARQFAAWGCKPSHAARVLRAFYSGNEIVSSPARGLPQELLTRLRTEFSPSSATLAARQVAADGTTKLLLRLGDGRTVESVLMPDFRADRAAGCISSQVGCAMGCDFCATTKTGFERNLTAGEIVEQFLALRREASAVGRKLQTVVFMGMGEPLLNLDAVLTAVRRLADNALGGLGWRQITVSTVGIVPGIEALTAAGLNIHLAVSLHAPDDATRARLLPMGKRIPIADILAAADRFQARRGRPVTIQYCLLAGVNDSQEHARLLAELLGSRRMHINLLRYNPTGLSLRGVAYEPSSDATAEAFAAVLRERKLVAHFRRSRGPDIDAACGQLRRRTSSGARAAVGGDL

Annotated regions:
phrase: PALADLDPATLARQFAAWGCKPSHAARVLRAFYSGNEIVSSPARGLPQELLTRLRTEFSPSSATLAARQVAADGTTKLLLRLGDGRTVESVLMPDFRADRAAGCISSQVGCAMGCDFCATTKTGFERNLTAGEIVEQFLALRREASAVGRKLQTVVFMGMGEPLLNLDAVLTAVRRLADNALGGLGWRQITVSTVGIVPGIEALTAAGLNIHLAVSLHAPDDATRARLLPMGKRIPIADILAAADRFQARRGRPVTIQYCLLAGVNDSQEHARLLAELLGSRRMHINLLRYNPTGLSLRGVAYEPSSDATAEAFAAVLRERKLVAHFRRSRGPDIDAACGQLRRRTSS
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: AAGCISSQVGCAMGCDFCATTKTGFERNLTAGEIVEQFLALRREASAVGRKLQTVVFMGMGEPLLNLDAVLTAVRRLADNALGGLGWRQITVSTVGIVPGIEALTAAGLNIHLAVSLHAPDDATRARLLPMGKRIPIADILAAADRFQARRGRPVTIQYCLLAGVNDSQEHARLLAELLGSRRMHINLLRYNPTGLSLRGVAYEPSSDATAEAFAAVLR
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: SSQVGCAMGCDFCATTKTGFERNLTAGEIVEQFLALRREASAVGRKLQTVVFMGMGEPLLNLDAVLTAVRRLADNALGGLGWRQITVSTVGIVPGIEALTAAGLNIHLAVSLHAPDDATRARLLPMGKRIPIADILAAADRFQARRGRPVTIQYCLLAGVNDSQEHA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: RADRAAGCISSQVGCAMGCDFCATTKTGFERNLTAGEIVEQFLALRREASAVGRKLQTVVFMGMGEPLLNLDAVLTAVRRLADNALGGLGWRQITVSTVGIVPGIEALTAAGLNIHLAVSLHAPDDATRARLLPMGKRIPIADILAAADRFQARRGRPVTIQYCLLAGVNDSQEHARLLAELLGSRRMHINLLRYNPTGLSLRGVAYEPSSDATAEAFAAVLRERKLVAHFRRSRGP
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MSLTQSKEVNSLSRRYSTYIERRITRTVMVGDIAIGSDYPVRVQSMINEDTMDVDNSYLAIKRLHEVGCEIVRLTVPSLAHAKAVGDIKEKLIKNNIDTPLVADVHHNGMKIAMEVAKHVDKVRINPGLFVFEKSDPTRTEYTDTEFETIKKTILKRFTPLVEVLKSENKALRIGVNHGSLSERMLFTYGDTPLGMTESAMEFVKICDELDFHNIIISMKASRAPVMLAAYRMIADRLDAEGYNYPLHLGVTEAGDGDYGRIKSTAGIGTLLAEGLGDTIRVSLTEAPEKEIPVCYSILQSLGLRKTMVEYISCPSCGRTLFNLEEVVDKVRKATSHLTGLDIAIMGCIVNGPGEMADADYGYVGKGKGTIALYRRKEEIKRVPEDEGVDALIRLIKDDGKWIDP

Annotated regions:
Protein sequence:
MATLIYVDKENGEPGTRVAAKDGLKLGSAPSIKALDGRSQVSTPRFGKTFDAPPALPKATRKALGTVNRATEKSVKTKGPLKQKQPSFSAKKMTEKTVKAKSSVPASDDAYPEIEKFFPFNPLDFESFDLPEEHQIAHLPLSGVPLMILDEERELEKLFQLGPPSPVRMPSPPWESNLLQSPSSILSTLDVELPPVCCDIDI

Annotated regions:
Protein sequence:
MRVSRYFLPILKETPREAEIVSHRLMLRSGMIRQQGAGSFSWLPLGKRVLDKVCQIVREEQDRAGAQEILMPTIQSADLWIESGRYNDYGKEMLRIRDRQDRAMLYGPTNEEMVTDIFRAYVKSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKAAYNRMFVAYLRTFARMGLKAIPMRADTGPIGGDLSHEFIILASTGESEVFCNKDFLDLPVPPADVDFTNDAEIGGVVSEWTTPYAATDEMHDEAAWAEVPAEKQLAARGIEVGHIFHFGTKYSKPMNAKVTGPDGQEHFVSMGSYGIGPTRLTAAIIEASHDDGGIIWPESVAPFDVALINMKVGDAECDRVCEELYAGMTAAGREVLYDDTDQRAGAKFATADLIGLPWQVIVGPRGIAAGEVEVKNRATGERENLPISAVPGRFGARR

Annotated regions:
phrase: DVALINMKVGDAECDRVCEELYAGMTAAGREVLYDDTDQRAGAKFATADLIGLPWQVIVGPRGIAAGEVEVKNRATGERENLPISAVP
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: EAEIVSHRLMLRSGMIRQQGAGSFSWLPLGKRVLDKVCQIVREEQDRAGAQEILMPTIQSADLWIESGRYNDYGKEMLRIRDRQDRAMLYGPTNEEMVTDIFRAYVKSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKAAYNRMFVAYLRTFARMGLKAIPMRADTGPIGGDLSHEFIILASTGESEVFCNKDFLDLPVPPADVDFTNDAEIGGVVSEWTTPYAATDEMHDEAAWAEVPAEKQLAARGIEVGHIFHFGTKYSKPMNAKVTGPDGQEHFVSMGSYGIGPTRLTAAII
type: DOMAIN
name: ProRS_core_prok
description: Prokaryote proline-tRNA ligase core domain

phrase: PFDVALINMKVGDAECDRVCEELYAGMTAAGREVLYDDTDQRAGAKFATADLIGLPWQVIVGPRGIAAGEVEVKNRATGERENLPISA
type: DOMAIN
name: ProRS_anticodon_short
description: Proline--tRNA ligase, anticodon binding domain

phrase: RDRQDRAMLYGPTNEEMVTDIFRAYVKSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKAAYNRMFVAYLRTFARMGLKAIPMRADTGPIGGDLSHEFIILASTGESEVFCNKDFLDLPVPPADVDFTNDAEIGGVVSEWTTPYAATDEMHDEAAWAEVPAEKQLAARGIEVGHIFHFGTKYSKPMNAKVTGPDGQEHFVSMGSYGIGPTRLTAAII
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: GSFSWLPLGKRVLDKVCQIVREEQDRAGAQEILMPTIQSADLWIESGRYNDYGKEMLRIRDRQDRAMLYGPTNEEMVTDIFRAYVKSYKDLPLNLYHIQWKFRDEVRPRFGVMRSREFLMKDAYSFDLDYEGAKAAYNRMFVAYLRTFARMGLKAIPMRADTGPIGGDLSHEFIILASTGESEVFCNKDFLDLPVPPADVDFTNDAEIGGVVSEWTTPYAATDEMHDEAAWAEVPAEKQLAARGIEVGHIFHFGTKYSKPMNAKVTGPDGQEHFVSMGSYGIGPTRLTAAIIEASHDDGGIIW
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II
Protein sequence:
MELVLVFLCSLLAPTVLASAAEKEKEMDPFHYDYQTLRIGGLVFAVVLFSVGILLILSRRCKCSFNQKPRAPGDEEAQVENLITANATEPQKAEN

Annotated regions:
phrase: DPFHYDYQTLRIG
type: CONSERVED_SITE
name: FXYD_motif
description: Ion-transport regulator, FXYD motif
Protein sequence:
MEFIINKINNIKNNNDNNNNINNNSNNNNNNNNNSNNNKFKFKYEFEFGYCYDVNLYEWRFIQDYETVPLKLNGILSNDEYNSILNIIGDVYDKTDKYPHVTYLLSIIMMVLLCMLPSVMAIHSNLNSYIQFVLFDDIFILITFILIPFLFFLKKKVIIENNYVIKGLKNRSIKLNIEYYKFKLLYFFFLLLWVPQGFLQSLIYKKRVLNEDFFNLKISLFILLGIDLIFILFAIWNFLLFTKLNRFLIKDRRDENILITLNSNIKKFLSPMEFYLTCNNTLNFFLNNNDNHFFPIDLDDPNV

Annotated regions:
Protein sequence:
MIEADRLISAGTTLPEDVADRAIRPKLLEEYVGQPQVRSQMEIFIKAAKLRGDALDHLLIFGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSPVVEEVLYPAMEDYQLDIIIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQRLEFYQVPDLQYIVSRSARFMGLEMSDDGALEVARRARGTPRIANRLLRRVRDFAEVKHDGTISADIAAQALDMLNVDAEGFDYMDRKLLLAVIDKFFGGPVGLDNLAAAIGEERETIEDVLEPYLIQQGFLQRTPRGRMATTRAWNHFGITPPEMP

Annotated regions:
phrase: ALDHLLIFGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSPVVEEVLYPAMEDYQLDIIIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQR
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: YQVPDLQYIVSRSARFMGLEMSDDGALEVARRARGTPRIANRLLRRVRDFAEVKHDGTISADIAAQALDMLNV
type: DOMAIN
name: AAA_lid_4
description: RuvB, AAA lid domain

phrase: IRPKLLEEYVGQPQVRSQMEIFIKAAKLRGDALDHLLIFGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSPVVEEVLYPAMEDYQLDIIIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQR
type: DOMAIN
name: RuvB-like_N
description: RuvB-like P-loop domain

phrase: EGFDYMDRKLLLAVIDKFFGGPVGLDNLAAAIGEERETIEDVLEPYLIQQGFLQRTPRGRMATTRAWNH
type: DOMAIN
name: RuvB_C
description: RuvB C-terminal winged helix domain
Protein sequence:
MKDLRNMTKSQIVEAIEQIGEKAFRGKQIFEWVMQKGVSDFDQMTNLPKSLIEKLKQEFTIDNYKIVEQLVSGDGTIKALGALEDGNLVESVFMTYKHGNSACISTQVGCKMGCAFCASTLGGIVRNLTVGEYLGQIYALQNLTGKRIDNIVLMGSGEPLDNYEETVKFLKRVTDTEGLNISIRSITVSTCGLVPEIYKLADEHLGITLAISLHNPFETERIEIMPITKRYGIVELLKAVDYYIAKTGRRVTFEYALIEGINDSVAHAEQLGRLLKGKLVHVNLIPVNAVKEKGFKPTQNNRINGFKSQLVDKYKINTTVRRELGSDINAACGQLRNSRLEANQS

Annotated regions:
phrase: DLRNMTKSQIVEAIEQIGEKAFRGKQIFEWVMQKGVSDFDQMTNLPKSLIEKLKQEFT
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: ISTQVGCKMGCAFCASTLGGIVRNLTVGEYLGQIYALQNLTGKRIDNIVLMGSGEPLDNYEETVKFLKRVTDTEGLNISIRSITVSTCGLVPEIYKLADEHLGITLAISLHNPFETERIEIMPITKRYGIVELLKAVDYYIAKTGRRVTFEYALIEGIND
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: YKHGNSACISTQVGCKMGCAFCASTLGGIVRNLTVGEYLGQIYALQNLTGKRIDNIVLMGSGEPLDNYEETVKFLKRVTDTEGLNISIRSITVSTCGLVPEIYKLADEHLGITLAISLHNPFETERIEIMPITKRYGIVELLKAVDYYIAKTGRRVTFEYALIEGINDSVAHAEQLGRLLKGKLVHVNLIPVNAVKEKGFKPTQNNRINGFKSQLVDKYKINTTVRRELGS
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: KDLRNMTKSQIVEAIEQIGEKAFRGKQIFEWVMQKGVSDFDQMTNLPKSLIEKLKQEFTIDNYKIVEQLVSGDGTIKALGALEDGNLVESVFMTYKHGNSACISTQVGCKMGCAFCASTLGGIVRNLTVGEYLGQIYALQNLTGKRIDNIVLMGSGEPLDNYEETVKFLKRVTDTEGLNISIRSITVSTCGLVPEIYKLADEHLGITLAISLHNPFETERIEIMPITKRYGIVELLKAVDYYIAKTGRRVTFEYALIEGINDSVAHAEQLGRLLKGKLVHVNLIPVNAVKEKGFKPTQNNRINGFKSQLVDKYKINTTVRRELGSDINAACGQLRNSRLE
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MLAKRIIPCLDVHEGRVVKGTNFVNLRDAGDPVELAALYDREGADELVFLDISASAEGRETMVEVVRRTAEQVFIPFTIGGGLRRVEDIRKMLRAGADKVSLNTSAVQTPGLIEEGAHAFGSQCIVVAIDARQTRPGAWEVYIHGGRTPTGKDVLQWAEEVERLGAGEILLTSMNRDGTKNGYDLELTRAVSRAVSLPVIASGGVGTLEHLAEGLTIGEADAVLAASIFHYQEYSIGEAKAYLEERGIPVRKG

Annotated regions:
Protein sequence:
MSKGHSLQDPYLNTLRKEKVGVSIYLVNGIKLQGTIESFDQFVILLKNTVSQMVYKHAISTVVPVRPIRLPSATDADGADAEPGNA

Annotated regions:
phrase: DPYLNTLRKEKVGVSIYLVNGIKLQGTIESFDQFVILLKNTVSQMVYKHAISTVVPVRP
type: DOMAIN
name: Sm
description: Sm domain
Protein sequence:
MPVTVRWLGETPYDACFDAMRAFTDARTPDTDDEIWVVEHPPVYTLGQAGNPAHLLVADSGVPLVKVDRGGQITYHGPGQIVAYLLVDLRRRKLMVRTLVTRIEEAVIETLAAYNLASARKAGAPGIYVESGPHRGAKIAALGLKIRNGCSYHGLSVNVKMDLRPFLAINPCGYAGLETIDMASLGATADWHEVAQTLVRRLIAHLDGATAAAALPQQALEQSND

Annotated regions:
phrase: RGGQITYHGPGQIVA
type: CONSERVED_SITE
name: Octanoyltransferase_CS
description: Octanoyltransferase, conserved site

phrase: PDTDDEIWVVEHPPVYTLGQAGNPAHLLVADSGVPLVKVDRGGQITYHGPGQIVAYLLVDLRRRKLMVRTLVTRIEEAVIETLAAYNLASARKAGAPGIYVESGPHRGAKIAALGLKIRNGCSYHGLSVNVKMDLRPFLAINPCGYAGLETIDMASLGATADWHEVAQTLVRRLIAHLDGA
type: DOMAIN
name: BPL_LPL_catalytic
description: Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain

phrase: DAMRAFTDARTPDTDDEIWVVEHPPVYTLGQAGNPAHLLVADSGVPLVKVDRGGQITYHGPGQIVAYLLVDLRRRKLMVRTLVTRIEEAVIETLAAYNLASARKAGAPGIYVESGPHRGAKIAALGLKIRNGCSYHGLSVNVKMDLRPFLAINPCGYAGLETIDMASLGATADWHEVAQTL
type: DOMAIN
name: BPL_LPL_catalytic
description: Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain
Protein sequence:
MNSLYIAGVWQDGQGEVVNSLNPVTQQVLWSGRGASAAQVEQAVQAARQAFPGWALLSLDQRIAVLEAFAARLKHHADALAQCIGEETGKPLWESATEVTSMVNKIAISVQSYRERTGEKSGPLGDATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNVVLFKPSELTPKVAELTVKCWIEAGLPAGVLNLLQGGRETGIALAANPGIDGLFFTGSSRTGNALHQQFAGRPDKILALEMGGNNPLIVDQVQDIDAAVYTIIQSAFISAGQRCTCARRLLVPEGDWGDALLARLVGVSATIEAGAFDQQPAPFMGSVISLEAARALLDAQRNLLANGALTLLEMRQPQPGAALLTPGIIDVSAVPERPDEELFGPLLQVIRYAGFDAAIAEANATRYGLAAGLLSDSEARYQQFWLHSRAGIVNWNKPLTGAASSAPFGGVGASGNHRASAYYAADYCAYPVASLEAGSLTLPATLTPGIRLS

Annotated regions:
phrase: LEMGGNN
type: CONSERVED_SITE
name: Ald_DH_CS_GLU
description: Aldehyde dehydrogenase, glutamic acid active site

phrase: WQDGQGEVVNSLNPVTQQVLWSGRGASAAQVEQAVQAARQAFPGWALLSLDQRIAVLEAFAARLKHHADALAQCIGEETGKPLWESATEVTSMVNKIAISVQSYRERTGEKSGPLGDATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNVVLFKPSELTPKVAELTVKCWIEAGLPAGVLNLLQGGRETGIALAANPGIDGLFFTGSSRTGNALHQQFAGRPDKILALEMGGNNPLIVDQVQDIDAAVYTIIQSAFISAGQRCTCARRLLVPEGDWGDALLARLVGVSATIEAGAFDQQPAPFMGSVISLEAARALLDAQRNLLANGALTLLEMRQPQPGAALLTPGIIDVSAVPERPDEELFGPLLQVIRYAGFDAAIAEANATRYGLAAGLLSDSEARYQQFWLHSRAGIVNWNKPLTGAASSAPFGGVGASGNHRASAYYAA
type: DOMAIN
name: Aldehyde_DH_dom
description: Aldehyde dehydrogenase domain

phrase: FISAGQRCTCA
type: CONSERVED_SITE
name: Ald_DH_CS_CYS
description: Aldehyde dehydrogenase, cysteine active site
Protein sequence:
MKLFNRKVTLVSLILMAVFQFFMALIIKRIVISAGTDENFIGYLSYTPSLNILLQALTIVIAATIVSMEFDKKTIKFLLIRPVKRQKVFWSKLITVVMVSFYLYLAYYILALLFGLLFFGTSVTAESKTLLVNTLALIGSNWLEAVMMGLFGLLCSSLFRNSAVAVVVSFVVLYGASTLVQLMKLFENKWGSFLLFANTDFTQYRSGETALFSGMTPLFSIGILIIHAIFFIVVGWWCFCKRDVRV

Annotated regions:
Protein sequence:
MLYSFHPYLKYFALLGLVPWSESCAQSKFVQKVYSAILIILNAVHFGISIYFPQSAELFLSLMVNVIVFVARIVCVTVIILQVMVHYDDYFRFCREMKYLGLRLQCELKIHVGRLKWQSYAKILALGIGFLVTVLPSIYVALSGSLLYFWSSLLSILIIRMQFVLVLLNVELLGHHVSLLGIRLQNVLECHLMGANCTLDGNANRLCSLEFLLALKQSHMQLHYLFTHFNDLFGWSILGTYVVLFSDSTVNIYWTQQVLVEVYEYKYLYATFSVFVPSFFNILVFCRCGEFCQRQSVLIGSYLRNLSCHPSIGRETSYKDLLMEFILQVEQNVLAINAEGFMSTDNSLLMSILAAKVTYLIVLMQFSSV

Annotated regions:
Protein sequence:
MKTPKVGFVSLGCPKALVDSERILTQLKTEGYQVASDYDGADLVVVNTCGFIESAVQESLDAIGEAMSENGRVIVTGCLGKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYVPAPPKHNPFIDLVPEQGIRLTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAALKRAGVKEILVISQDTSAYGVDTKYKLDFWNGQPVKTKFFDMCEALGQLGIWVRLHYVYPYPHVDAVIDLMAQGKILPYLDIPFQHASPRVLKLMKRPAHSENTLEKIKLWREKCPNLVIRSTFVVGFPGETEEDFQILLDWLVEAQLDRVGCFTYSPVEGATANDLPDHVPEEIKQERYERFMQVQQQISAAKLQKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDGNVFVEDIDKSTIQPGDMLEVEITDADEYDLFAKLIKIKSV

Annotated regions:
phrase: LTPKHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAALKRAGVKEILVISQDTSAYGVDTKYKLDFWNGQPVKTKFFDMCEALGQLGIWVRLHYVYPYPHVDAVIDLMAQGKILPYLDIPFQHASPRVLKLMKRPAHSENTLEKIKLWREKCPNLVIRSTFVVGFPGETEEDFQILLDWLVEAQLDRVGCFTYSPVEGATANDLPDHVPEEIKQERYERFMQVQQQISA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: KISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAALKRAGVKEILVISQDTSAYGVDTKYKLDFWNGQPVKTKFFDMCEALGQLGIWVRLHYVYPYPHVDAVIDLMAQGKILPYLDIPFQHASPRVLKLMKRPAHSENTLEKIKLWREKCPNLVIRSTFVVGFPGETEEDFQILLDW
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: PKVGFVSLGCPKALVDSERILTQLKTEGYQVASDYDGADLVVVNTCGFIESAVQESLDAIGEAMSENGRVIVTGCLGKDEDKIRQMHPNVLKVTGAAAYQDVMEAVHEYV
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: LKISEGCNHRCTFCIIPSMR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: HYAYLKISEGCNHRCTFCIIPSMRGDLVSRPVGSVLEEAAALKRAGVKEILVISQDTSAYGVDTKYKLDFWNGQPVKTKFFDMCEALGQLGIWVRLHYVYPYPHVDAVIDLMAQGKILPYLDIPFQHASPRVLKLMKRPAHSENTLEKIKLWREKCPNLVIRSTFVVGFPGETEEDFQILLDWLVEAQLDRVGCFTYSPVEGATANDLPDHVPEEIKQERYERFM
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: QKRIGQTMTVLVDSLEDEYPVAVARSYADAPEIDGNVFVEDIDKSTIQPGDMLEVEITDADEYDLFAKLI
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: IGQTMTVLVDSLEDEYPVAVARSYADAPEIDGNVFVEDIDKSTIQPGDMLEVEITDADEYDLFAKL
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: KVGFVSLGCPKALVDSERILTQLKTEGYQVASDYDGADLVVVNTCGFIESAVQESLDAIGEAMSENGRVIVTGCLGKDEDKIRQMHPN
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal
Protein sequence:
MNRFLLLMSLYLLGSARGTSSQPNELSGSIDHQTSVQQLPGEFFSLENPSDAEALYETSSGLNTLSEHGSSEHGSSKHTVAEHTSGEHAESEHASGEPAATEHAEGEHTVGEQPSGEQPSGEHLSGEQPLSELESGEQPSDEQPSGEHGSGEQPSGEQASGEQPSGEHASGEQASGAPISSTSTGTILNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCNKI

Annotated regions:
phrase: LNCYTCAYMNDQGKCLRGEGTCITQNSQQCMLKKIFEGGKLQFMVQGCENMCPSMNLFSHGTRMQIICCRNQSFCN
type: DOMAIN
name: LY6_UPA_recep-like
description: Ly-6 antigen/uPA receptor-like
Protein sequence:
MMFKQYLQVTKPGIIFGNLISVIGGFLLASKGSINYPLFIYTLVGVSLVVASGCVFNNYIDRDIDRKMERTKNRVLVKGLISPAVSLVYATLLGIAGFMLLWFGANPLACWLGVMGFVVYVGIYSLYMKRHSVYGTLIGSLSGAAPPVIGYCAVTGEFDSGALILLAIFSLWQMPHSYAIAIFRFKDYQAANIPVLPVVKGISVAKNHITLYIIAFAVATLMLSLGGYAGYKYLVVAAAVSVWWLGMALRGYKVEDDKVWARKLFGFSIIAITALSVMMSVDFMVPDSHSLLASVW

Annotated regions:
phrase: NNYIDRDIDRKMERTKNRVLVK
type: CONSERVED_SITE
name: UbiA_prenylTrfase_CS
description: UbiA prenyltransferase conserved site
Protein sequence:
MSDHTGDNEDNGKLLYCSFCGKSQHEVRKLIAGPSVFICDECVDLCNDIIREEIQESTTESTGDKLPTPQEISETLDEYVIGQKQAKKVLAVAVYNHYKRLRVGDKKKSKDDVELGKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTGNILFICGGAFAGLDKVIRDRSEKGGIGFSAEVKSKDSGKNVGETLRELEPEDLVRYGLIPEFVGRLPVIATLDELDQDALVRILKEPKNSLVKQYSKLFEMEGSEVDFRDDALEAVANKAMERKTGARGLRSIMENVLLDTMYKIPSEENVVKVVVDESVIKGESAPLLVYGNNDAETAKAVPEE

Annotated regions:
phrase: YCSFCGKSQHEVRKLIAGPSVFICDECVDLCNDIIR
type: DOMAIN
name: Znf_CppX_C4
description: Zinc finger, ClpX C4-type

phrase: KSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTGNILFICGGAFAGLDKVIRDRSEKGGIGFSAEVKSKDSGKNVGETLRELEPEDLVRYGLIPEFVGRLPV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: TGDNEDNGKLLYCSFCGKSQHEVRKLIAGPSVFICDECVDLCNDIIREEIQES
type: DOMAIN
name: Znf_CppX_C4
description: Zinc finger, ClpX C4-type

phrase: LDQDALVRILKEPKNSLVKQYSKLFEMEGSEVDFRDDALEAVANKAMERKTGARGLRSIMENVLLDTMYKIPSEENVVKVVVDESVIKGESAPLL
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal

phrase: GKSNILLVGPTGSGKTLLAETLARLLNVPFTIADATTLTEAGYVGEDVENIIQKLLQKCDYDVEKAQQGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPQQEFLQVDTGNILFICGGAFAGLDKVIRDRSEKGGIGFSAEVKSKDSGKNVGETLRELEPEDLVRYGLIPEFVGRLPVIATLDELDQDALVRILKEPKNS
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LLYCSFCGKSQHEVRKLIAGPSVFICDECVDLCNDIIRE
type: DOMAIN
name: Znf_CppX_C4
description: Zinc finger, ClpX C4-type

phrase: LDQDALVRILKEPKNSLVKQYSKLFEMEGSEVDFRDDALEAVANKAMERKTGARGLRSIMENVLLDTMYKIPSEENV
type: DOMAIN
name: Clp_ATPase_C
description: Clp ATPase, C-terminal
Protein sequence:
MDNGIRVKLVNYTKKPLETVTWAALISYWDEWETETFGRMSDKDVEMHLPRVLGYGHESILEHATLTFAIEGCSRVCSHQLVRHRLASYTQQSQRYIVLNPEDVEETFVIPSGIKEDPELLAEWKELMKKSIELYKKSVERGQHQEDARFILPQAVRTKIVVTMNLRELKHFLGLRACERAQWEIREVAWKMLEEIAKNDELRPIIKWAKLGPRCVQLGYCPEGELMPPGCWKRTGEKWKTLFEG

Annotated regions:
Protein sequence:
MSRLKKLYTEEIRKSLQEKFGYGNTMQIPVLRKIVISMGLAEAAKDKNLFQAHLEELSMISGQKPLVTKARNSIAGFKLREGQGIGAKVTLRGQRMYDFMDRFCNIVSPRIRDFRGFSMKGDGRGCYSLGLDDQQIFPEIDLDRVKRTQGMNITWVTTAQTDVECTTLLELMGLRFKKAQ

Annotated regions:
phrase: LSMISGQKPLVTKARN
type: CONSERVED_SITE
name: Ribosomal_uL5_CS
description: Large ribosomal subunit protein uL5, conserved site

phrase: NTMQIPVLRKIVISMGLAEAAKDKNLFQAHLEELSMISGQKPLVTKARNSIAGFKL
type: DOMAIN
name: Ribosomal_uL5_N
description: Large ribosomal subunit protein uL5, N-terminal

phrase: IGAKVTLRGQRMYDFMDRFCNIVSPRIRDFRGFSMKGDGRGCYSLGLDDQQIFPEIDLDRVKRTQGMNITWVTTAQTDVECTTLLELMGLR
type: DOMAIN
name: Ribosomal_uL5_C
description: Large ribosomal subunit protein uL5, C-terminal
Protein sequence:
MARVENMTERYAVFGNPIGHSKSPKIHTMFAKETGQSLSYEAILAPIDAFEASFKEFAANEGYGANVTVPFKEQAFSLCDELSEQAQLAGAVNTLSVLADGKIRGDNTDGLGLVADLKRNLGDLCGLQVLLIGAGGAARGSVLPLLHSGIAKLTIVNRTQAKAEALVEIFTSYGDVTSLPITHVGQSYDVIINSTSSSLSGEVPNISPDTIAPHTVCYDMMYGKQSTAFNLWAKSLGAGQTIDGLGMLVGQAAASFSIWRKVTPSVEPVLAQLRSELIG

Annotated regions:
phrase: GLGMLVGQAAASFSIWRKVTPSVEPVLAQL
type: DOMAIN
name: SDH_C
description: SDH, C-terminal

phrase: KRNLGDLCGLQVLLIGAGGAARGSVLPLLHSGIAKLTIVNRTQAKAEALVEIFTSYGDVTSLPITHVGQSYDVIINSTSS
type: DOMAIN
name: Shikm_DH/Glu-tRNA_Rdtase
description: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase

phrase: VFGNPIGHSKSPKIHTMFAKETGQSLSYEAILAPIDAFEASFKEFAANEGYGANVTVPFKEQAFSLCDELSEQAQLAGAVNT
type: DOMAIN
name: Shikimate_DH-bd_N
description: Shikimate dehydrogenase substrate binding, N-terminal
Protein sequence:
MRTATIKRKTKETDIEVTVNLDGAGVSNAATGIGFFDHMLDLLAKHSRIDITVKAVGDLHVDFHHTTEDVGIALGQAVRQALGNMAGIIRYASMLMPMDETLTRVVIDVSGRPFLVFKAEFPRDKIGEFDTELVREWFQAFAMNAGVTLHVETLYGENSHHIAESCFKGLARALRAAVAIDPQAAGEVPSTKGQLGG

Annotated regions:
phrase: GENSHHIAESCF
type: CONSERVED_SITE
name: ImidazoleglycerP_deHydtase_CS
description: Imidazoleglycerol-phosphate dehydratase, conserved site

phrase: VDFHHTTEDVGIA
type: CONSERVED_SITE
name: ImidazoleglycerP_deHydtase_CS
description: Imidazoleglycerol-phosphate dehydratase, conserved site
Protein sequence:
MHRSDAAPASSIRIYFRLLSYVRPYVGLFAVSILGYVIFASSQPMLAGVLKYFVDGLTHPDAALVTGVPLLDGMELMHGVPLMIVLIAAWQGLGGYLGNYFLARVSLGLVHDLRQTLFDSLLRLPNTYFDQHSSGHLISRITFNVTMVTGAATDAIKIVIREGLTVVFLFAYLLWMNWRLTLVMVAILPLISLMVRNASGKFRKQSRKIQVAMGDVTHVASETIQGYRVVRSFGGEHYERERFRAASEDNTRKQLKMVKTSAVYTPTLQLVTYSAMAVVLFLVLRLRGEASVGDLVAYITAAGLLPKPIRQLSEVSSTIQRGVAGAESIFEQLDDKPEVDHGRIERERVSGRIEVRDLSFRYPGSDREVLDSVSFTVEPGQMIALVGRSGSGKSTLANLIPRFYHHDRGQILIDGVDVEDYTLKNLRRHIALVTQQVTLFNDTVANNIAYGDLAGLPRAAVEAAAEAGYAKEFIDRLPQGFDTLIGENGVTLSGGQRQRLAIARALLKNAPILILDEATSALDTESERHIQAALHRVMQARTTLVIAHRLSTIEQADVIMVMDHGRIVERGSHAELLAAGGHYARLHAMQFREEPAVAEGR

Annotated regions:
phrase: AVSILGYVIFASSQPMLAGVLKYFVDGLTHPDAALVTGVPLLDGMELMHGVPLMIVLIAAWQGLGGYLGNYFLARVSLGLVHDLRQTLFDSLLRLPNTYFDQHSSGHLISRITFNVTMVTGAATDAIKIVIREGLTVVFLFAYLLWMNWRLTLVMVAILPLISLMVRNASGKFRKQSRKIQVAMGDVTHVASETIQGYRVVRSFGGEHYERERFRAASEDNTRKQLKMVKTSAVYTPTLQLVTYSAMAVVLFLVLRLRGEASVGDLVAYITAAGLLPKPIRQLSEVSSTIQ
type: DOMAIN
name: ABC1_TM_dom
description: ABC transporter type 1, transmembrane domain

phrase: IEVRDLSFRYPGSDREVLDSVSFTVEPGQMIALVGRSGSGKSTLANLIPRFYHHDRGQILIDGVDVEDYTLKNLRRHIALVTQQVTLFNDTVANNIAYGDLAGLPRAAVEAAAEAGYAKEFIDRLPQGFDTLIGENGVTLSGGQRQRLAIARALLKNAPILILDEATSALDTESERHIQAALHRVMQARTTLVIAHRLSTIEQADVIMVMDHGRIVERGSHAELLAAGGHYARLHA
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: ILGYVIFASSQPMLAGVLKYFVDGLTHPDAALVTGVPLLDGMELMHGVPLMIVLIAAWQGLGGYLGNYFLARVSLGLVHDLRQTLFDSLLRLPNTYFDQHSSGHLISRITFNVTMVTGAATDAIKIVIREGLTVVFLFAYLLWMNWRLTLVMVAILPLISLMVRNASGKFRKQSRKIQVAMGDVTHVASETIQGYRVVRSFGGEHYERERFRAASEDNTRKQLKMVKTSAVYTPTLQLVTYSAMAVVLFLVLRLRGEASVGDLVAYITAAGL
type: DOMAIN
name: ABC1_TM_dom
description: ABC transporter type 1, transmembrane domain

phrase: LDSVSFTVEPGQMIALVGRSGSGKSTLANLIPRFYHHDRGQILIDGVDVEDYTLKNLRRHIALVTQQVTLFNDTVANNIAYGDLAGLPRAAVEAAAEAGYAKEFIDRLPQGFDTLIGENGVTLSGGQRQRLAIARALLKNAPILILDEAT
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: LSGGQRQRLAIARA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: PGQMIALVGRSGSGKSTLANLIPRFYHHDRGQILIDGVDVEDYTLKNLRRHIALVTQQVTLFNDTVANNIAYGDLAGLPRAAVEAAAEAGYAKEFIDRLPQGFDTLIGENGVTLSGGQRQRLAIARALLKNAPILILDEATSALDTESERHIQAALHRVMQARTTLVIAHRLS
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain
Protein sequence:
MAAPTLGHLVLTHLLVALLGMGSWAAVNGIWVELPVVVKHLPEGWSLPSYLSVVVALGNLGLLVVTLWRRLAPGKGERVPIQVVQVLSVVGTALLAPLWHHVAPVAGQLHSVAFLTLALVLALACCTSNVTFLPFLSHLPPPFLRSFFLGQGLSALLPCVLALVQGVGRLECSPAPTNGTSGPPLNFPERFPASTFYWALTALLVTSAAAFQGLLLLLPSLPSVTTGGAGPELPLGSPGAEEEEKEEEEALPLQEPPSQAAGTIPGPDPEAHQLFSAHGAFLLGLLAITSALTNGVLPAVQSFSCLPYGRLAYHLAVVLGSAANPLACFLAMGVLCRSLAGLVGLSLLGMLFGAYLMVLAILSPCPPLVGTTAGVVLVVLSWVLCLCVFSYVKVAASSLLHGGGRPALLAAGVAIQMGSLLGAGTMFPPTSIYHVFQSRKDCVDPCGP

Annotated regions:
Protein sequence:
MGKKRTKGKNVQSDDLTDISEPVCKHLRKGLEQGHLKKVLQNVDWGSCQDCRISDNGTPEKSEDEAEDKPSIWLCLKCGHRGCGRNSQEKHALKHYETPRSEPHCLVLNVDNWSVWCYLCDNEVQYSTSSRLGQLVDYVRKQTCTNVQNKDGAISVSKDEETKPVENKKVKDHKNEEEKEKKELLLKENKIHLNGHTEVTVKGLSNLGNTCFFNAVLQNLSQTPVLRELLKEVKMADYTITIEPPEFSITEPVVITLDQPRPLTLAMCDFLTDMQETKKGTVTPKELFSQVCKKAIRFKGYQQQDSQELLRYLLDGMRTEEVQRICAGIFKALNNSADKENEELKKKIKEYEKRKITQTFVDRIFGGELTSTIMCEECQTVSLVHESFLDLSLPVLNDQGAKKKTVEKRVKKLQENEMEDDADNIENDSYLKDREETPGTSKHLQKKAKKIAKKQAKNHRRQQKFQEKVIPLTDSCATEKNETDHISSNGIEKAEINSEVASLKQEEKSLNSYEQSCVDQRDNINGHDITDTHNNNVNAEDSGQLENNEVGTGIPSEGLVSVVECVNKFDNLSLEEDSTLPVEDEDDDEDEDCAANGFHKLSLDEEPEDDTDSFSELHNSKLYQVVNEDPETAFCTLANREEINTEESSVLHCLYQFTHNEKLCENNKLLCDVCTHKQLCGPKTTGKNVKKPVYTNAKKQMLISLAPPILTLHLKRFQQTGYNLQKVNKHIKFPEVIDLAPFCSIKCKNVAEGSSRVLYSLYGIVEHS

Annotated regions:
phrase: KGLSNLGNTCFFNAVLQNLSQTPVLRELLKEVKMADYTITIEPPEFSITEPVVITLDQPRPLTLAMCDFLTDMQETKKGTVTPKELFSQVCKKAIRFKGYQQQDSQELLRYLLDGMRTEEVQRICAGIFKALNNSADKENEELKKKIKEYEKRKITQTFVDRIFGGELTSTIMCEECQTVSLVHESFLDLSLPVLNDQGAKKKTVEKRVKKLQENEMEDDADNIENDSYLKDREETPGTSKHLQKKAKKIAKKQAKNHRRQQKFQEKVIPLTDSCATEKNETDHISSNGIEKAEINSEVASLKQEEKSLNSYEQSCVDQRDNINGHDITDTHNNNVNAEDSGQLENNEVGTGIPSEGLVSVVECVNKFDNLSLEEDSTLPVEDEDDDEDEDCAANGFHKLSLDEEPEDDTDSFSELHNSKLYQVVNEDPETAFCTLANREEINTEESSVLHCLYQFTHNEKLCENNKLLCDVCTHKQLCGPKTTGKNVKKPVYTNAKKQMLISLAPPILTLHLKRFQQTGYNLQKVNKHIKFPEVIDLAPFCSIKCKNVAEGSSRVLYSLYGIVEH
type: DOMAIN
name: USP_dom
description: Ubiquitin specific protease domain

phrase: SCQDCRISDNGTPEKSEDEAEDKPSIWLCLKCGHRGCGRNSQEKHALKHYETPRSEPHCLVLNVDNWS
type: DOMAIN
name: Znf_UBP
description: Zinc finger, UBP-type

phrase: GLSNLGNTCFFNAVL
type: CONSERVED_SITE
name: USP_CS
description: Ubiquitin specific protease, conserved site

phrase: PVCKHLRKGLEQGHLKKVLQNVDWGSCQDCRISDNGTPEKSEDEAEDKPSIWLCLKCGHRGCGRNSQEKHALKHYETPRSEPHCLVLNVDNWSVWCYLCDNEVQYSTSSRLGQLVDYVRKQ
type: DOMAIN
name: Znf_UBP
description: Zinc finger, UBP-type

phrase: GLSNLGNTCFFNAVLQNLSQTPVLRELLKEVKMADYTITIEPPEFSITEPVVITLDQPRPLTLAMCDFLTDMQETKKGTVTPKELFSQVCKKAIRFKGYQQQDSQELLRYLLDGMRTEEVQRICAGIFKALNNSADKENEELKKKIKEYEKRKITQTFVDRIFGGELTSTIMCEECQTVSLVHESFLDLSLPVLNDQGAKKKTVEKRVKKLQENEMEDDADNIENDSYLKDREETPGTSKHLQKKAKKIAKKQAKNHRRQQKFQEKVIPLTDSCATEKNETDHISSNGIEKAEINSEVASLKQEEKSLNSYEQSCVDQRDNINGHDITDTHNNNVNAEDSGQLENNEVGTGIPSEGLVSVVECVNKFDNLSLEEDSTLPVEDEDDDEDEDCAANGFHKLSLDEEPEDDTDSFSELHNSKLYQVVNEDPETAFCTLANREEINTEESSVLHCLYQFTHNEKLCENNKLLCDVCTHKQLCGPKTTGKNVKKPVYTNAKKQMLISLAPPILTLHLKRFQQTGYNLQKVNKHIKFPEVIDLAPFCSIKCKNVAEGSSRVLYSLYGIVEH
type: DOMAIN
name: Peptidase_C19_UCH
description: Peptidase C19, ubiquitin carboxyl-terminal hydrolase

phrase: CQDCRISDNGTPEKSEDEAEDKPSIWLCLKCGHRGCGRNSQEKHALKHYETPRSEPHCLVLNVDNWSVWCYLCDNEVQ
type: DOMAIN
name: Znf_UBP
description: Zinc finger, UBP-type