nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTHGEELGSDVHQDSIVLTYLEGLLMHQAAGGSGTAVDKKSAGHNEEDQNFNISGSAFPTCQSNGPVLNTHTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDSIMNLNVKKEALLAGMVDSVPKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDLRCYGVASSHLKTLLKKSKVKDQKPDTNLPDVTKNLIRDRFAESPHHVGQSGTKVMSEPLSCAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAASERLAAMARLQENGQKDVGSYQLPKGMSSHLNGQARTSSSKLMASKSSATVFQNPMGIIPSSPKNAGYKNSLERNNIKQAANNSLLLHLLKSQTIPKPMNGHSHSERGSIFEESSTPTTIDEYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHRTEKSESDQPVSLDNFTQSLLNTWDPKVPDVDIKEDQDTSKNSKLNSHQKVTLLQLLLGHKNEENVEKNTSPQGVHNDVSKFNTQNYARTSVIESPSTNRTTPVSTPPLLTSSKAGSPINLSQHSLVIKWNSPPYVCSTQSEKLTNTASNHSMDLTKSKDPPGEKPAQNEGAQNSATFSASKLLQNLAQCGMQSSMSVEEQRPSKQLLTGNTDKPIGMIDRLNSPLLSNKTNAVEENKAFSSQPTGPEPGLSGSEIENLLERRTVLQLLLGNPNKGKSEKKEKTPLRDESTQEHSERALSEQILMVKIKSEPCDDLQIPNTNVHLSHDAKSAPFLGMAPAVQRSAPALPVSEDFKSEPVSPQDFSFSKNGLLSRLLRQNQDSYLADDSDRSHRNNEMALLESKNLCMVPKKRKLYTEPLENPFKKMKNNIVDAANNHSAPEVLYGSLLNQEELKFSRNDLEFKYPAGHGSASESEHRSWARESKSFNVLKQLLLSENCVRDLSPHRSNSVADSKKKGHKNNVTNSKPEFSISSLNGLMYSSTQPSSCMDNRTFSYPGVVKTPVSPTFPEHLGCAGSRPESGLLNGCSMPSEKGPIKWVITDAEKNEYEKDSPRLTKTNPILYYMLQKGGNSVTSRETQDKDIWREASSAESVSQVTAKEELLPTAETKASFFNLRSPYNSHMGNNASRPHSANGEVYGLLGSVLTIKKESE

Annotated regions:
phrase: PTTIDEYSDNNPSFTDDSSGDESSYSNCVPIDLSCKHRTEKSESDQPVSLDNFTQSLLNTWDPKVPDVDIKEDQDTSKNSKLNSHQKVTLLQLLLGHKNEENVEKNTSPQGVHNDVSKFNTQNYARTSVIESPSTNRTTPVSTPPLLTSSKAGSPINLSQHSLVIKWNSPPYVCSTQSEKLTNTASNHSMDLTKSKDPPGEKPAQNEGAQNSATFSASKLLQNLAQCGMQSSMSVEEQRPSKQLLTGNTDKPIGMIDRLNSPLLSNKTNAVEENKAFSSQPTGPEPGLSGSEIENLLERRTVLQLLLGNPNKGKSEKKEKTPLRDE
type: DOMAIN
name: NRIP1_RD2
description: Nuclear receptor-interacting protein 1, repression domain 2

phrase: ESKNLCMVPKKRKLYTEPLENPFKKMKNNIVDAANNHSAPEVLYGSLLNQEELKFSRNDLEFKYPAGHGSASESEHRSWARESKSFNVLKQLLLSENCVRDLSPHRSNSVADSKKKGHKNNVTNSKPEFSISSLNGLMYSSTQPSSCMDNRTFSYPGVVKTPVSPTFPEHLGCAGSRPESGLLNGCSMPSEKGPIKWVITDAEKNEYEKDSPRLTKTNPILYYMLQKGGNSVTSRETQDKDIWREASSAESVSQVTAKEELLPTAETKASFFNLRSPYNSHMGNNASRPHSANGEVYGLLGSVLTIKKES
type: DOMAIN
name: NRIP1_RD4
description: Nuclear receptor-interacting protein 1, repression domain 4

phrase: HQAAGGSGTAVDKKSAGHNEEDQNFNISGSAFPTCQSNGPVLNTHTYQGSGMLHLKKARLLQSSEDWNAAKRKRLSDSIMNLNVKKEALLAGMVDSVPKGKQDSTLLASLLQSFSSRLQTVALSQQIRQSLKEQGYALSHDSLKVEKDLRCYGVASSHLKTLLKKSKVKDQKPDTNLPDVTKNLIRDRFAESPHHVGQSGTKVMSEPLSCAARLQAVASMVEKRASPATSPKPSVACSQLALLLSSEAHLQQYSREHALKTQNANQAASERLAAMARLQENGQKDVGSYQLPKGMSSHLNGQA
type: DOMAIN
name: NRIP1_RD1
description: Nuclear receptor-interacting protein 1, repression domain 1
Protein sequence:
MHEMGIALQIAEIAKSAIPKTPADLKVKAVNLRVGKLTAIVPDSLRFCFEIVAKDTPLAEAELNIEEIPIVAVCKECYTETIITDADFSCEKCKSGKLDIISGRELTVSSIEVADPEEMKQAQKKSKKEK

Annotated regions:
phrase: GKLTAIVPDSLRFCFEIVAKDTPLAEAELNIEEIPIVAVCKE
type: CONSERVED_SITE
name: Hydgase_Ni_incorp_HypA/HybF_CS
description: Hydrogenase nickel incorporation protein HypA/HybF, conserved site
Protein sequence:
MSVKIFNSLTKQKEIFKPIESGKVKLYVCGMTVYDYMHIGHGRSWIIFDMVVRYLRMRGYEVTFVRNITDIDDKIIKRAGENKESPAALAERFIQILHEDEKALRVLSPDQEPRATQYVPEIIKLIQKLLDNQYAYTGQNGDVFFDVRRFKDYGKLSHRHLDELQAGARVEVSDSKRDPLDFVLWKKAKPGEPKWDSPWGEGRPGWHIECSAMSSSILGQPFDIHGGGLDLKFPHHENEIAQSEAGEEKPFVKLWMHAGLLEINKEKMSKSLGNIISIREALKESDVEVLRYFLLSGHYRNPLSYSKENLENGRLALERFYLALRGLPVVNHEKTSSYTDRFYEAMDDDFNTPIAFALLFEMVREINRFRDNNQIEKAAVLAAELKCLGNIFGLLQYSPEQFLQGAKKEADVQEIKKLIDQRNEARAKKDWKTADQIRDQLTDLGVAIEDSSDGTSWRQE

Annotated regions:
phrase: RFYEAMDDDFNTPIAFALLFEMVREINRFRDNNQIEKAAVLAAELKCLGNIFGLL
type: DOMAIN
name: Cys-tRNA-synt_Ia_DALR
description: Cysteinyl-tRNA synthetase, class Ia, DALR

phrase: KIFNSLTKQKEIFKPIESGKVKLYVCGMTVYDYMHIGHGRSWIIFDMVVRYLRMRGYEVTFVRNITDIDDKIIKRAGENKESPAALAERFIQILHEDEKALRVLSPDQEPRATQYVPEIIKLIQKLLDNQYAYTGQNGDVFFDVRRFKDYGKLSHRHLDELQAGARVEVSDSKRDPLDFVLWKKAKPGEPKWDSPWGEGRPGWHIECSAMSSSILGQPFDIHGGGLDLKFPHHENEIAQSEAGEEKPFVKLWMHAGLLEINKEKMSKSLGNIISIREALKESDVEVLRYFLLSGHYRNPLSY
type: DOMAIN
name: tRNA-synt_1_cat_dom
description: tRNA synthetases class I, catalytic domain

phrase: FKPIESGKVKLYVCGMTVYDYMHIGHGRSWIIFDMVVRYLRMRGYEVTFVRNITDIDDKIIKRAGENKESPAALAERFIQILHEDEKALRVLSPDQEPRATQYVPEIIKLIQKLLDNQYAYTGQNGDVFFDVRRFKDYGKLSHRHLDELQAGARVEVSDSKRDPLDFVLWKKAKPGEPKWDSPWGEGRPGWHIECSAMSSSILGQPFDIHGGGLDLKFPHHENEIAQSEAGEEKPFVKLWMHAGLLEINKEKMSKSLGNIISIREALKESDVEVLRYFLLSGHYRNPLSYSKENLE
type: DOMAIN
name: tRNA-synt_1_cat_dom
description: tRNA synthetases class I, catalytic domain

phrase: RFYEAMDDDFNTPIAFALLFEMVREINRFRDNNQIEKAAVLAAELKCLGNIFGLLQYSPEQF
type: DOMAIN
name: Cys-tRNA-synt_Ia_DALR
description: Cysteinyl-tRNA synthetase, class Ia, DALR

phrase: EIKKLIDQRNEARAKKDWKTADQIRDQLTDLGVAIEDSSDGTSW
type: DOMAIN
name: CysS_C
description: Cysteinyl-tRNA ligase, anticodon binding domain
Protein sequence:
MRKTNMWFLERLRGSGENGASRGEAGDKSSKGPLYSNVLTPDKIPDFFIPPKLPSGPTEAEGQADLGPSTSEQNLASPGPRRAPRSPRLPAKLASESRSLLKAATRHVIQIESAEDWTAEEATNADPQAQGAMSLPSVPKAQTSYGFATLAESPHTRRKESLFHSEHGALAQVGSPGAGRRRAGAKGNGGDGGSREVGGALMSPSRYFSGGESDTGSSAESSPFGSPLLSRSVSLLKGFAQDSQAKVSQLKQSVGRHGSLSADDSTPDTSPGVRRRLSRRATPEPGPESGQAPRGEHTVKMGTRGSVRLLAEYEAAQARLRVRLLAAEGLYDRPCDARSINCCVGLCLVPGKLQKQRSTIIKNSRHPIFNEDFFFDGLGPASVRKLALRIKVVNKGSSLKRDTLLGEEELPLTSLLPFL

Annotated regions:
phrase: TRGSVRLLAEYEAAQARLRVRLLAAEGLYDRPCDARSINCCVGLCLVPGKLQKQRSTIIKNSRHPIFNEDFFFDGLGPASVRKLALRIKVVNKGSSLKRDTLLGEEELPLTSLLPF
type: DOMAIN
name: C2_dom
description: C2 domain

phrase: RLRVRLLAAEGLYDRPCDARSINCCVGLCLVPGKLQKQRSTIIKNSRHPIFNEDFFFDGLGPASVRKLALRIKVVNKGSSLKRDTLLGEEELPLT
type: DOMAIN
name: C2_dom
description: C2 domain

phrase: RLRVRLLAAEGLYDRPCDARSINCCVGLCLVPGKLQKQRSTIIKNSRHPIFNEDFFFDGLGPASVRKLALRIKVVNKGSSLKRDTLLGEEELPLTSLLPF
type: DOMAIN
name: C2_dom
description: C2 domain
Protein sequence:
MAAAPVLEFERPIADLEKQIEELKRLAADRSLDVAEELAPLQKKLGDLRIQIYQNLSPLQRVQVARMSRRPFTSDYIKHAFSDFIELHGDRLFREDAAIMAGWARLEGETVMLIGHERGRDTKENLKRNFGMPHPEGYRKALRLMKLAEKFQVPVLTFIDTPGAWPGLGAEERGQSEAIARNLLEMSQLQVPIIATIIGEGGSGGALALGVADRVLMFENSVYSTISVEGCAAILWKDGKSQEMREKAATALRVTAADLVELRVIDEVIQEPVGGAHADHAATARALRETLTRNLEELRRLKPDKLVRRRREKFLRMGQFTE

Annotated regions:
phrase: PLQKKLGDLRIQIYQNLSPLQRVQVARMSRRPFTSDYIKHAFSDFIELHGDRLFREDAAIMAGWARLEGETVMLIGHERGRDTKENLKRNFGMPHPEGYRKALRLMKLAEKFQVPVLTFIDTPGAWPGLGAEERGQSEAIARNLLEMSQLQVPIIATIIGEGGSGGALALGVADRVLMFENSVYSTISVEGCAAILWKDGKSQEMREKAATALRVTAADLVELRVIDEVIQEPVGGAHADHAATARALRETLTRNLE
type: DOMAIN
name: COA_CT_C
description: Acetyl-coenzyme A carboxyltransferase, C-terminal
Protein sequence:
MFDINLIRKDIVVTKEKMLNKKVSSDLFDQIFGLDVLVRNLMQQEQNLNAKKNQLSKEIGILAKNKDPKLQQTLDLVNSIKSELQDISLTLSNKQDELNKLLLVIPNMPDDSVPIGNDENDNVEIKKVFEPRKFDFSPLAHWDLAAKNKLIDFDKSTKITGSRFIIYTNFGARLYRALQQFCLDMNVKAGFNEIWAPVIVNQESLIGSGNLPKFVDDLFKLENSNYYLSPTAEVQLTNLHRNEILKASDLPLYYTALTPCFRSEAGSAGRDVRGVIRQHQFHKVELVKLCKPEDSFKELESMTRQAESILEALELPYRRIALCTGDLGFSSAKTYDLEVWLPSYNAYKEISSCSNCTNFQARRAKIRYKETVDAPTELVHTLNGSSLAIDRLWAAVVENYQQEDGSITIPKALEKYIY

Annotated regions:
phrase: DNVEIKKVFEPRKFDFSPLAHWDLAAKNKLIDFDKSTKITGSRFIIYTNFGARLYRALQQFCLDMNVKAGFNEIWAPVIVNQESLIGSGNLPKFVDDLFKLENSNYYLSPTAEVQLTNLHRNEILKASDLPLYYTALTPCFRSEAGSAGRDVRGVIRQHQFHKVELVKLCKPEDSFKELESMTRQAESILEALELPYRRIALCTGDLGFSSAKTYDLEVWLPSYNAYKEISSCSNCTNFQARRAKIRYKETVDAPTELVHTLNGSSLAIDRLWAAVVENYQQEDGSITIPKALEKY
type: DOMAIN
name: SerRS_core
description: Serine-tRNA ligase catalytic core domain

phrase: ENSNYYLSPTAEVQLTNLHRNEILKASDLPLYYTALTPCFRSEAGSAGRDVRGVIRQHQFHKVELVKLCKPEDSFKELESMTRQAESILEALELPYRRIALCTGDLGFSSAKTYDLEVWLPSYNAYKEISSCSNCTNFQARRAKIRYKETVDAPTELVHTLNGSSLAIDRLWAAVVEN
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: MFDINLIRKDIVVTKEKMLNKKVSSDLFDQIFGLDVLVRNLMQQEQNLNAKKNQLSKEIGILAKNKDPKLQQTLDLVNSIKSELQDISLTLSNKQDELNKLLLVIPNM
type: DOMAIN
name: Ser-tRNA-synth_1_N
description: Serine-tRNA synthetase, type1, N-terminal

phrase: GARLYRALQQFCLDMNVKAGFNEIWAPVIVNQESLIGSGNLPKFVDDLFKLENSNYYLSPTAEVQLTNLHRNEILKASDLPLYYTALTPCFRSEAGSAGRDVRGVIRQHQFHKVELVKLCKPEDSFKELESMTRQAESILEALELPYRRIALCTGDLGFSSAKTYDLEVWLPSYNAYKEISSCSNCTNFQARRAKIRYKETVDAPTELVHTLNGSSLAIDRLWAAVVENYQQEDGSITI
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II
Protein sequence:
MTETTTKKRWYVLQAFSGFEGRVATTLREYIKLHQMEDQFGEVLVPTEEVVENVAGKRRKSERKFFPGYVLVQMEMNDETWHLVRSVPRVMGFIGGTADKPAPISQREADRILNRLQESSEKPRHRKEFQPGEEVRVTEGPFADFNGTVEEVDYEKGRLKVSVSIFGRATPVELEFSQVEKTN

Annotated regions:
phrase: PGEEVRVTEGPFADFNGTVEEVDYEKGRL
type: DOMAIN
name: KOW
description: KOW

phrase: KKRWYVLQAFSGFEGRVATTLREYIKLHQMEDQFGEVLVPTEEVVENVAGKRRKSERKFFPGYVLVQMEMNDETWHLVRSVPRVMGFIGGTADKPAPISQREADRILNR
type: DOMAIN
name: NGN-like_dom
description: NusG-like, N-terminal

phrase: KRWYVLQAFSGFEGRVATTLREYIKLHQMEDQFGEVLVPTEEVVENVAGKRRKSERKFFPGYVLVQMEMNDETWHLVRSVPRVMGFIGGTADKPAPISQREADRI
type: DOMAIN
name: NGN-like_dom
description: NusG-like, N-terminal

phrase: IFGRATPVE
type: CONSERVED_SITE
name: Transcrpt_antiterm_NusG_bac_CS
description: Transcription antitermination protein, NusG, bacteria, conserved site

phrase: EFQPGEEVRVTEGPFADFNGTVEEVDY
type: DOMAIN
name: KOW
description: KOW

phrase: RWYVLQAFSGFEGRVATTLREYIKLHQMEDQFGEVLVPTEEVVENVAGKRRKSERKFFPGYVLVQMEMNDETWHLVRSVPRVMGFIGGTADKPAPISQREADRILNR
type: DOMAIN
name: NGN
description: NusG, N-terminal
Protein sequence:
MAKKIVAVIKLALQAGKANPAPPVGPALGQHGVNIMAFCKEYNAKTQDKAGFVIPVEISVFEDRSFTFITKTPPAAVLITKAAGIDKGSGESSKGSVGNISKAQLEEIAKTKLPDLNCSSVESAMKVIEGTARNMGVSITD

Annotated regions:
phrase: IKLALQAGKANPAPPVGPALGQHGVNIMAFCKEYNAKTQDKAGFVIPVEISVFEDRS
type: DOMAIN
name: Ribosomal_uL11_N
description: Large ribosomal subunit protein uL11, N-terminal

phrase: KTPPAAVLITKAAGIDKGSGESSKGSVGNISKAQLEEIAKTKLPDLNCSSVESAMKVIEGTARNMGVS
type: DOMAIN
name: Ribosomal_uL11_C
description: Large ribosomal subunit protein uL11, C-terminal

phrase: KVIEGTARNMGVSIT
type: CONSERVED_SITE
name: Ribosomal_uL11_CS
description: Large ribosomal subunit protein uL11, conserved site
Protein sequence:
MVSEYIDSELKRLEDYALRRVKGIPNNRRLWVLTCMDERVHIEQSLGIQPDDAHIYRNAGGIVTDDAIRSASLTTNFFGTKEIIVVTHTDCGMLRFTGEEVAKYFISKGIKPTEVQLDPLLPAFRISSEEDFIKWFKFYEDLGVKSPDEMALKGVEILRNHPLIPKDVRITGYVYEVETHRLRKPNQIIYNETSKFEHGTIVKE

Annotated regions:
Protein sequence:
IGREAIVGAGLQGPFGGPWPYDALSPFDMPYGPALPAMSCGAGSFGPSSGFAPAAAYGGGLAVTSSSPISPTGLSVTSENTIEGVVAVTGQLPFLGAVVTDGIFPTVGAGDVWYGCGDGAVGIVAETPFASTSVNPAYGYGGAIGGGVPYNSYGPIGYGGCGYNALY

Annotated regions:
Protein sequence:
MAKLIIINSEKGEKVETHEDIFKLSNLQQREIYAITNERTKSILLNQTFYTILDIENEPKDRVAFDSYNSLFPTSIFSYNRQDRLFGTCNHVLDNNIHYSFALFDSMVDNLSTYLPNDWNIIKIPDSIDYPIGNDLLFYVFDNLVHMTIDQFVNSEEKQMNTVPKCKESQDRIKEVFTDIMSHLYMPAIDYDPQSYNYRISRREIGNLVRDQVFSLVKGHIHLIGPEMESLRNIIMFLHAGNSITFHTIDTSKKSNYIKELEFNKKTKLTMANVLINQRKNMNNFFKGLIKHYMTYGIPNKVYYIGAYPSYWLELITWVPFNIITYDPKYRHVDNDKIIWHDKLFDRNDIETIESKSYIYIDIRTDIRKLDMTKKQRIFKEEDDMIVEIATKLASKQCTVMFKRKIFPGNNMSFGDPLFHPKLTQLGREYYNCITTIVSPSIYKESELYSLLLSARSNNVSNYVYGGSKFDQSSIVNYNSTVIALYSLSNTVNSLETIEHAIKFNHIITFPHRTDRGDWRNIEELNNLSPFQNKKRQLEFEDWSIDPKNYAMKFGCEIVSESVFLQLGHSRALIPDLYNHIISIRMEMPLFYPDRFFSHIGIRQPSIFKRDSYMTSRLSAYISRQLTHSIDLSVLKKNHFEGYSGHLIAIETSFSSLVFTMSPYRWLIRAKKSLTKSKIRDKFKIGDGQPHTREEFENTYDYLKINRLVNSTFHSLLLG

Annotated regions:
Protein sequence:
MVKNQAQKKGVKRKQVKNIPSGIVHVKATFNNTIVTITDPAGNVISWASAGKVGYSGSRKSSAFAATVAAQDAAKAAMSSGLKEVEVGLKGTGAGRESAVRALISSGLIVSVIRDETPVPHNGCRPRKRRRV

Annotated regions:
phrase: VRALISSGLIVSVIRDETPVPH
type: CONSERVED_SITE
name: Ribosomal_uS11_CS
description: Small ribosomal subunit protein uS11, conserved site
Protein sequence:
MALQALNIWTRVILTDASRAAVFRGALQSHCFKCRHGAKRFLLSEDVVKLEEFQQKKLSHEMSQLKDYRFDIVNQKLEKNEIILKTELKTLLHSCQSAEDVIVARNVIKRYHENNRTTAFGEFKFGPLFMRLCYELGLEELAATTIKDPALKGFFSDTTSFNITIDMLFNKQLYESGLEVVGEMKKQGVSLSRDTFMLVFAICYKLNTSRSYHICLTLLEEGQTKGNIIPRRAYCFAIALALKQNDLERAQIFYSHIMSTGTRLCQNLRVFILAVKGSMKEAVYVLKTARISETPVLVRKPEFSREVVNVLRRKSAGGVWEERVEQVLTQLEKAGQITEITLDDLLCYTPSRKRRLLELPQKDRQIKQRTRKSLQSGLLLE

Annotated regions:
phrase: DTTSFNITIDMLFNKQLYESGLEVVGEMKKQGVS
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat
Protein sequence:
MSEQKLALNEYLKTDSDYLRGTIKEGLDSSVTGSFSDGDQQLIKFHGFYQQDDRDLRNERKEQKLEPLYSFMLRARVPGGVCTPKQWLGVDEIASTLTSSNSIRLTTRQTFQYHGIPKRNLKTIIQGLDREALDSIAACGDVNRNVMCNPNPVESKLHAQAYEVAKKLSDHLLPHTRAYAEIWLDEEKLLTTEDETVEPVYGKTYLPRKFKMAVAVPPDNDVDVYTNDLGFIAVAENGELVGFNLTAGGGMGSTHGEVETFPRLADDFGFIKTEDVMKFAEAVMTVQRDWGNRTNRKRSRLKYTIVDHGYEKFKAEVEARAGVKFEPKRDVVIGDRGDRYGWVEGVDGKWHLTLFIESGRIKDVPGKSLQTGMREIAKIHKGDFRMTSNQNMIIAGVAPEDKATIEGLARKHGLLGQVLTQTRGHSIACVALPTCPLAMAEAERYFPEFIDHIDALQAKNGISDQAIVVRMTGCPNGCARPFAAEIGLVGKAPGRYNLYLGANFEGTRLNKMYRENIQEAEILAELDALFARYAVERNAGETFGNFTVRTGVVKAVIDAAKDFHG

Annotated regions:
phrase: AKKLSDHLLPHTRAYAEIWLDEEKLLTTEDETVEPVYGKTYLPRKFKMAVAVPPDNDVDVYTNDLGFIAVAENGELVGFNLTAGGGMGSTHGEVETFPRLADDFGFIKTEDVMKFAEAVMTVQRDWGNRTNRKRSRLKYTIVDHGYEKFKAEVEARAGV
type: DOMAIN
name: NO2/SO3_Rdtase_4Fe4S_dom
description: Nitrite/sulphite reductase 4Fe-4S domain

phrase: GHSIACVALPTCPLAMAE
type: BINDING_SITE
name: NO2/SO3_Rdtase_FeS/sirohaem_BS
description: Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site

phrase: TGCPNGCARPFAAEIGLV
type: BINDING_SITE
name: NO2/SO3_Rdtase_FeS/sirohaem_BS
description: Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site

phrase: TGCPNGCARPFAAEIG
type: BINDING_SITE
name: NO2/SO3_Rdtase_FeS/sirohaem_BS
description: Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site

phrase: DGKWHLTLFIESGRIKDVPGKSLQTGMREIAKIHKGDFRMTSNQNMIIAGVAPEDKATI
type: DOMAIN
name: NiRdtase/SiRdtase_haem-b_fer
description: Nitrite/Sulfite reductase ferredoxin-like domain

phrase: SFMLRARVPGGVCTPKQWLGVDEIASTLTSSNSIRLTTRQTFQYHGIPKRNLKTIIQGL
type: DOMAIN
name: NiRdtase/SiRdtase_haem-b_fer
description: Nitrite/Sulfite reductase ferredoxin-like domain
Protein sequence:
MSYTPMSDLGQQGLFDITRTLLQQPDLASLSEALSQLVKRSALADSAGIVLWQAQSQRAQYYATRENGRPVEYEDETVLAHGPVRRILSRPDALHCNFHEFTETWPQLAASGLYPEFGHYCLLPLAAEGRIFGGCEFIRQEDRPWSEKEYDRLHTFTQIVGVVAEQIQNRVNNNVDYDLLCRERDNFRILVAITNAVLSRLDIDELVSEVAKEIHHYFNIDAISIVLRSHRKNKLNIYSTHYLDEHHPAHEQSEVDEAGTLTERVFKSKEMLLINLNERDPLAPYERMLFDTWGNQIQTLCLLPLMSGKTMLGVLKLAQCEEKVFTTANLKLLRQIAERVAIAVDNALAYQEIHRLKERLVDENLALTEQLNNVDSEFGEIIGRSEAMYNVLKQVEMVAQSDSTVLILGETGTGKELIARAIHNLSGRSGRRMVKMNCAAMPAGLLESDLFGHERGAFTGASAQRIGRFELADKSSLFLDEVGDMPLELQPKLLRVLQEQEFERLGSNKLIQTDVRLIAATNRDLKKMVADREFRNDLYYRLNVFPIQLPPLRERPEDIPLLVKAFTFKIARRMGRNIDSIPAETLRTLSSMEWPGNVRELENVVERAVLLTRGNVLQLSLPDITAVTPDTSPVATESDKEGEDEYQLIIRVLKETNGVVAGPKGAAQRLGLKRTTLLSRMKRLGIDKDALA

Annotated regions:
phrase: WPGNVRELE
type: CONSERVED_SITE
name: Sigma_54_int_dom_CS
description: Sigma-54 interaction domain, conserved site

phrase: VLILGETGTGKEL
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_1
description: Sigma-54 interaction domain, ATP-binding site 1

phrase: SDSTVLILGETGTGKELIARAIHNLSGRSGRRMVKMNCAAMPAGLLESDLFGHERGAFTGASAQRIGRFELADKSSLFLDEVGDMPLELQPKLLRVLQEQEFERLGSNKLIQTDVRLIAATNRDLKKMVADREFRNDLYYRLNV
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: IIGRSEAMYNVLKQVEMVAQSDSTVLILGETGTGKELIARAIHNLSGRSGRRMVKMNCAAMPAGLLESDLFGHERGAFTGASAQRIGRFELADKSSLFLDEVGDMPLELQPKLLRVLQEQEFERLGSNKLIQTDVRLIAATNRDLKKMVADREFRNDLYYRLNVFPI
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: IIGRSEAMYNVLKQVEMVAQSDSTVLILGETGTGKELIARAIHNLSGRSGRRMVKMNCAAMPAGLLESDLFGHERGAFTGASAQRIGRFELADKSSLFLDEVGDMPLELQPKLLRVLQEQEFERLGSNKLIQTDVRLIAATNRDLKKMVADREFRNDLYYRLNVFPIQLPPLRERPEDIPLLVKAFTFKIARRMGRNIDSIPAETLRTLSSMEWPGNVRELENVVERAV
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: DIDELVSEVAKEIHHYFNIDAISIVLRSHRKNKLNIYSTHYLDEHHPAHEQSEVDEAGTLTERVFKSKEMLLINLNERDPLAPYERMLFDTWGNQIQTLCLLPLMSGKTMLGVLKLAQCEEKVFTTANLKLLRQIAERVAIAVDNALAYQEI
type: DOMAIN
name: GAF
description: GAF domain

phrase: DLASLSEALSQLVKRSALADSAGIVLWQAQSQRAQYYATRENGRPVEYEDETVLAHGPVRRILSRPDALHCNFHEFTETWPQLAASGLYPEFGHYCLLPLAAEGRIFGGCEFIRQEDRPWSEKEYDRLHTFTQIVGVVAEQIQNRVNN
type: DOMAIN
name: GAF
description: GAF domain

phrase: DIDELVSEVAKEIHHYFNIDAISIVLRSHRKNKLNIYSTHYLDEHHPAHEQSEVDEAGTLTERVFKSKEMLLINLNERDPLAPYERMLFDTWGNQIQTLCLLPLMSGKTMLGVLKLAQCEEKVFTTANLKLLRQIAERVAIA
type: DOMAIN
name: GAF
description: GAF domain
Protein sequence:
MSITKDQIIEGVAALSVMEIVELIAAMEEKFGVSAAAVAAGPAAAAEAVEEKTEFDVVLKGIGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGISKDDAEALKKALEEAGAEVEVK

Annotated regions:
phrase: FDVVLKGIGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGISKDDAEALKKALEEAGAEVEV
type: DOMAIN
name: Ribosomal_bL12_C
description: Large ribosomal subunit protein bL12, C-terminal

phrase: TKDQIIEGVAALSVMEIVELIAAMEEKFGVSAAAVAAGPAAAAE
type: DOMAIN
name: Ribosomal_bL12_oligo
description: Large ribosomal subunit protein bL12, oligomerization
Protein sequence:
MNFLSTAESRTAQAAASGTTLLPQFRAPSWQTGMHSSAATELFATGPLPSTGTLPPSLSAYQHPTTFSNRNFATTSPLVLQDSTFNTTSNGILSHHDPLLQIKTSQGTVPTALAFERLGSSVLSNSIPPQSSTYRSAQESAPHLLQPQFSLLPSALGGSQQTPQAYSSTLFTSSTASIERALLRECSVIKHHQRPSGTQSIQAQLTGSQHSLHSYLSNSSVVNFQETTRQSSLSCSPIGDSTQVSNGGLQQKTSQVSVELAQSYSSAIPSSGYPPSTTKIKSCSTEQPLTSTKTPKPQSIIPPVQTLSYSKPLHNQSSVISGQAQIYSTAQLPSLLSVSQSQNYGLVQPHNVPSIVHSQVYRSSKVEKLPPLYKTLTFSGSSQTVTPENQTLNYSSNQQEVLSSVTNENYPAQTRDLSSVSQSQSYSSGHSQGLSPVSQTQVSYSSQSQVLSVVSLSESYASGESLTLTAPSLSYSSASRAQNLPDSSPTQNYISMHSSQNVQTQESSSPQSQKFLPAVQSSSFASSTHCQTLQNNITSPDPKSYAERKLDSDVYPSSKQEDGFPMQELQVLQPQASLESSTQRLSDGEINAQESTYKVSKADDRYSQSVIRSNSRLEDQVIGVALQASKKEESVVGSVTQLNQQIGQVNNAATLDLKNSTNLIQTPQIRLNTKDLKQQHPLILKVHESKVQEQHDQIINASSQIQIPNHALGHGHQASLPNTQVLLDSACDLQILQQSILQAGLGQVKASLQAQRVQSPQQIVHPFLQMEGHVIQSNGDHSQQQLHPQNSEVMKMDLSESSKPLQQHLTTKGHFSETNQHDSKNQFVSLGSMCFPEAVLLSDERNILSNVDDILAATAAACGVTPTDFSKSTSNETMQAVEDGDSKSHFQQSLDVRHVTSDFNSMTATVGKPQNINDTSLNGNQVTVNLSPVPALQSKMTLDQQHIETPGQNIPTKVTSAVVGPSHEVQEQSSGPFKKQSATNLESEEDSEAPVDSTLNNNRNQEFVSSSRSISGENATSESEFTLGGDDSGVSMNPARSALALLAMAQSGDAVSVKIEEENQDLMHFNLQKKRAKGKGQVKEEDNSNQKQLKRPAQGKRQNPRGTDIYLPYTPPSSESCHDGYQHQEKMRQKIKEVEEKQPEVKTGFIASFLDFLKSGPKQQFSTLAVRMPNRTRRPGTQMVRTFCPPPLPKPSSTTPTPLVSETGGNSPSDKVDNELKNLEHLSSFSSDEDDPGYSQDAYKSVSTPLTTLDATSDKKKKTEALQVATTSPTANTTGTATTSSTTVGAVKQEPLHSTSYAVNILENISSSESSKPIELDGLPSDQFAKGQDTVAIEGFTDEEDTESGGEGQYRERDEFVVKIEDIETFKEALKTGKEPPAIWKVQKALLQKFVPEIRDGQREFAATNSYLGYFGDAKSKYKRIYVKFIENANKKEYVRVCSKKPRNKPSQTIRTVQAKPSSSSKTSDPLASKTTTTKAPSVKPKVKQPKVKAEPPPKKRKKWKEEFSSSQSDSSPEIHTSSSDDEEFEPPAPFVTRFLNTRAMKETFKSYMELLVSIALDPDTMQALEKSNDELLLPHMKKIDGMLNDNRKRLLLNLHLDQSFKNALESFPELTIITRDSKAKSGGTAISKIKMNGKAYNKKTLRTSKTTTKSAQEFAVDPEKIQLYSLYHSLHHYKYHVYLICKDEISSVQKKNEDLGQEEIVQLCMKNVKWVEDLFEKFGELLNHVQQKCS

Annotated regions:
phrase: SSDDEEFEPPAPFVTRFLNTRAMKETFKSYMELLVSIALDPDTMQALEKSNDELLLPHMKKIDGMLNDNRKRLLLNLHLDQSFKNALESFPELTIITRDSKAKSGGTAISKIKMNGKAYNKKT
type: DOMAIN
name: DUF4211
description: Domain of unknown function DUF4211
Protein sequence:
MGDWMTVTDPVLCTENKNLSQYTSETKMSPSSLYSQQVLCSSVPLSKNVHGVFGVFCTGENIEQSISYLDQELTTFGFPSLYEESKSKEAKRELNIVAVLNCMNELLVLQRKNLLAQESVETQNLKLGSDMDHLQSCYAKLKEQLETSRREMIGLQERDRQLQCKNRSLHQLLKNEKDEVQKLQNIIASRATQYNHDVKRKEREYNKLKERLHQLVMNKKDKNIAMDVLNYVGRADGKRGSWRTDKTEARNEDEMYKILLNDYEYRQKQILMENAELKKVLQQMKKEMISLLSPQKKKPRERAEDGTGTVAISDIEDDSGELSRDSVWGLSCDTVREQLTNSIRKQWRILKSHVEKLDNQASKVHSEGLNEEDVISRQDHEQETEKLELEIERCKEMIKAQQQLLQQQLATTCDDDTTSLLRDCYLLEEKERLKEEWTLFKEQKKNFERERRSFTEAAIRLGLERKAFEEERASWVKQQFLNMTNFDHQNSENVKLFSAFSGSSDPDNLIVHSRPRQKKLHSVANGVPACTSKLTKSLPASPSTSDFRQTHSCVSEHSSISVLNITPEESKPSEVARESTDQKWSVQSRPSSREGCYSGCSSAFRSAHGDRDDLP

Annotated regions:
Protein sequence:
MRTQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIELRDDGDIRLLTPVEGVEHEDNLIVRAARLLMKTAADSGRLSTGSGANISIDKRLPMGGGLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGADVPVFVRGHAAFAEGVGEIFTPVDPPEKWYLVAHPGVSIPTPVIFKDPELPRNTPKRSIETLLKCEFSNDCEVIARKRFREVDVVLSWLLEYAPSRLTGTGACVFAEFDTESEARQVLEQAPEWLNGFVARGVNLSPLHRAML

Annotated regions:
phrase: NLIVRAARLLMKTAADSGRLSTGSGANISIDKRLPMGGGLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGADVPVFVR
type: DOMAIN
name: GHMP_kinase_N_dom
description: GHMP kinase N-terminal domain

phrase: KRSIETLLKCEFSNDCEVIARKRFREVDVVLSWLLEYAPSRLTGTGACVFAEFDTESEARQVLEQAPEW
type: DOMAIN
name: GHMP_kinase_C_dom
description: GHMP kinase, C-terminal domain
Protein sequence:
MQTVQKHDHLFLDISQHAMRLDLLARTALYEEVSLAHKPGLVCPTTQGSHQDMDFALFERSIQSLTYYFQEQCLNGYHEVSFDSIRQCGIQAEQDMMAATKQINTHKGAIFNLGFASAAVGKCFAQDILLNAISISRMIQQTWQEELLHHLERNPNSHGQRMRSQYGITGAIEEVASGFKTVLDVAVPHYLEIYAKTGDKKRASLQALFALMSHLQDTNIVWRGGLSALYIVQDMAKQFLARGGVLQHNWMQDVSKVEDYFVRHHLSPGGSADLLGVTLFMLKVEHEFRNII

Annotated regions:
Protein sequence:
MNIWMTVLVLVVKAVVLALCVTLAVAVFLLFMRKFLAYFAYRVGPVKVGPWGVLQPIADVIKMLFKEDIMPEQADPLIYRLAPVIAFFCALGVWVVIPWAPRGSWWSSMADPNAGVLVILAIAAMGVYGTALGGWASQNKYGLLGSMRATAQMISYELAMAMSLLGVILMTGSVSMYDIVDAQRNMINLFPQFLGFLVFYIASLAEAGWTPFDLPESETELVAGYHTDYGGMRFGLFFLTELTHAVNSAVLSTTFFLGGYNPWFGLTMIPGFVWFLLKVILMVFVLYWIKCTFPRFRYDRLMVFGWKVLLPVAALNLVGTAIYVALWA

Annotated regions:
phrase: PFDLPESETELVA
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_su1_CS
description: NADH:ubiquinone oxidoreductase, subunit 1, conserved site
Protein sequence:
MTLLDSDSRQSAEVLPAAGPAPDRPRTYQVRTFGCQMNMHDSERIAGLLEAAGYVRAADDEPADVVVFNTCAVRENADNRLYGNLGLLLPVKKAKPDMQIAVGGCLAQKDKGDIVRRAPWVDVVFGTHNIEALPVLLERARIAREAQVEIREALEVFPSTLPSRRESVYAAWVAISVGCNNTCTFCIVPSLRGRERDRRPGDILREIQTLVADGVLEVTLLGQNVNSYGVDFGDRQAFAKLLRACGTIDGLERVRFTSPHPRDFTDDVIAAMAETPNVMPQLHMPLQSGSDAVLRRMRRSYRKEKYLDIISRVRSAIPDAAITTDIIVGFPGETEDDFAETLDVVRKARFAGAFTFQYSKRPGTPAAEMPDQVPPDVVADRFARLVALVEQIALEENQAQVGRVVEVLVAEGEGRKDAETHRMSGRAPDNRLVHFRATDARPGDVVTVAVTQAAPHCLIADQVLGVRRTRAGDAWEARRSVRPSGVLLGMPALRPRT

Annotated regions:
phrase: RESVYAAWVAISVGCNNTCTFCIVPSLRGRERDRRPGDILREIQTLVADGVLEVTLLGQNVNSYGVDFGDRQAFAKLLRACGTIDGLERVRFTSPHPRDFTDDVIAAMAETPNVMPQLHMPLQSGSDAVLRRMRRSYRKEKYLDIISRVRSAIPDAAITTDIIVGFPGETEDDFAETLDVVRKARFAGAFTFQYSKRPGTPAAEMPDQVPPDVVADRFARLVALVEQIAL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: AQVGRVVEVLVAEGEGRKDAETHRMSGRAPDNRLVHFRATDARPGDVVTVAVTQAAPHCLIA
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: YAAWVAISVGCNNTCTFCIVPSLRGRERDRRPGDILREIQTLVADGVLEVTLLGQNVNSYGVDFGDRQAFAKLLRACGTIDGLERVRFTSPHPRDFTDDVIAAMAETPNVMPQLHMPLQSGSDAVLRRMRRSYRKEKYLDIISRVRSAIPDAAITTDIIVGFPGETEDDFAETLDVVRKARFAGAFTFQYSKRPGTPAAEMPDQVPPDVVADRFARLV
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: YQVRTFGCQMNMHDSERIAGLLEAAGYVRAADDEPADVVVFNTCAVRENADNRLYGNLGLLLPVKKAKPDMQIAVGGCLAQKDKGDIVRRAPWVDVVF
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: QAQVGRVVEVLVAEGEGRKDAETHRMSGRAPDNRLVHFRATDARPGDVVTVAVTQAAPHCLIADQV
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: ISVGCNNTCTFCIVPSLRGRERDRRPGDILREIQTLVADGVLEVTLLGQNVNSYGVDFGDRQAFAKLLRACGTIDGLERVRFTSPHPRDFTDDVIAAMAETPNVMPQLHMPLQSGSDAVLRRMRRSYRKEKYLDIISRVRSAIPDAAITTDIIVGFPGETEDDFAETL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: RTYQVRTFGCQMNMHDSERIAGLLEAAGYVRAADDEPADVVVFNTCAVRENADNRLYGNLGLLLPVKKAKPDMQIAVGGCLAQKDKGDIVRRAPWVDVVFGTHNIEALPVLLERAR
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: VAISVGCNNTCTFCIVPSLR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: PRTYQVRTFGCQMNMHDSERIAGLLEAAGYVRAADDEPADVVVFNTCAVRENADNRLYGNLGLLLPVKKAKPDMQIAVGGCLAQKDKGDIVRRAPWVDVVFGTHNIEALPVLLERARIAREAQVEIREALEVFPSTLPSRRESVYAAWVAISVGCNNTCTFCIVPSLRGRERDRRPGDILREIQTLVADGVLEVTLLGQNVNSYGVDFGDRQAFAKLLRACGTIDGLERVRFTSPHPRDFTDDVIAAMAETPNVMPQLHMPLQSGSDAVLRRMRRSYRKEKYLDIISRVRSAIPDAAITTDIIVGFPGETEDDFAETLDVVRKARFAGAFTFQYSKRPGTPAAEMPDQVPPDVVADRFARLVALVEQIALEENQAQVGRVVEVLVAEGEGRKDAETHRMSGRAPDNRLVHFRATDARPGDVVTVAVTQAAPHCLIADQ
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MELKATPRKSQEKLAPGMIPAVAYNKEKNVTFAIERKAFDRAFRQQGTTGLFDIVIEGGETFPALVKAVQMDKRRREAIHADFYMVTYGEPVEVSVPVHTTGKSQGEIQGGLVDVVVHSLNVIAPGPRRIPQEITVDVTNLNIGDHVTAGQIKLPEGVKLAVEPDLVVLSVLPPRLSAEELEAQAQAAQVAGMVASGELSEAAAEAVLEGSASLDAVKAGEEGSRAQQETEEASERADQGQ

Annotated regions:
phrase: APGMIPAVAYNKEKNVTFAIERKAFDRAFRQQGTTGLFDIVIEGGETFPALVKAVQMDKRRREAIHAD
type: DOMAIN
name: Ribosomal_L25_dom
description: Large ribosomal subunit protein bL25, L25 domain

phrase: VEVSVPVHTTGKSQGEIQGGLVDVVVHSLNVIAPGPRRIPQEITVDVTNLNIGDHVTAGQIKLPEGVKLAVEPDLVVLSVLPP
type: DOMAIN
name: Ribosomal_bL25_b-dom
description: Large ribosomal subunit protein bL25, beta domain

phrase: ELKATPRKSQEKLAPGMIPAVAYNKEKNVTFAIERKAFDRAFRQQGTTGLFDIVIEGGETFPALVKAVQMDKRRREAIHADF
type: DOMAIN
name: Ribosomal_L25_dom
description: Large ribosomal subunit protein bL25, L25 domain