nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MPNSLSPTRVDLKTLDRTELECLAAEMREPAYRGRQMFEWLYGKGAASVDEMTNLPLQFREKLHETHRIGKIGPEQISTSVDGTTKALVRLESGLHVEAVLIPDVVDGDIRRLTACVSSQVGCAMACAFCATGTMGFHQNLTSGEIFDQARLMNELAIERYGRGLTNIVYMGMGEPLLNYANVVKSLRIISDPSGLDISPKRITVSTVGISRRIRHLADDDPGVRLAVSVHAPTDAQRSAIMPVNRAARTDLAALRAALEYYWSKTSRDVTYEYCLFDGVNDSDADARALAEIVQWIPSKVNLIMYNPVGGLPFERTSDERVNQFVRVLVKKRVTVTIRKSRGDDIAAACGQLAVREESSAG

Annotated regions:
phrase: TRVDLKTLDRTELECLAAEMREPAYRGRQMFEWLYGKGAASVDEMTNLPLQFREKLHETHRIGKIGPEQISTSVDGTTKALVRLESGLHVEAVLIPDVVDGDIRRLTACVSSQVGCAMACAFCATGTMGFHQNLTSGEIFDQARLMNELAIERYGRGLTNIVYMGMGEPLLNYANVVKSLRIISDPSGLDISPKRITVSTVGISRRIRHLADDDPGVRLAVSVHAPTDAQRSAIMPVNRAARTDLAALRAALEYYWSKTSRDVTYEYCLFDGVNDSDADARALAEIVQWIPSKVNLIMYNPVGGLPFERTSDERVNQFVRVLVKKRVTVTIRKSRGDDIAAACGQLAVREE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: DIRRLTACVSSQVGCAMACAFCATGTMGFHQNLTSGEIFDQARLMNELAIERYGRGLTNIVYMGMGEPLLNYANVVKSLRIISDPSGLDISPKRITVSTVGISRRIRHLADDDPGVRLAVSVHAPTDAQRSAIMPVNRAARTDLAALRAALEYYWSKTSRDVTYEYCLFDGVNDSDADARALAEIVQWIPSKVNLIMYNPVGGLPFERTSDERVNQFVRVLVKKRVTVTIRKSRGD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SSQVGCAMACAFCATGTMGFHQNLTSGEIFDQARLMNELAIERYGRGLTNIVYMGMGEPLLNYANVVKSLRIISDPSGLDISPKRITVSTVGISRRIRHLADDDPGVRLAVSVHAPTDAQRSAIMPVNRAARTDLAALRAALEYYWSKTSRDVTYEYCLFDGVNDSD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VDLKTLDRTELECLAAEMREPAYRGRQMFEWLYGKGAASVDEMTNLPLQFREKLHETHR
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MKIVVAIGGSILLKEYDCKKFQEYSEILKSLASEHEIFVVVGGGKPAREYIGVVRELGAGEAQCDDIGIEVTRINAKLLLSALGDAAYQKVPHNFQEALEYSATGKIIVMGGTEPAHSTDAVSAILAEYIHADKLINLTSVDGMYDKDPNKYEDAKLIKEITASEMIEFISGKDTKAGTYEFFDMTAIQMIKRSSLETVIANGYDSENLIKAINGEEVGTKVISK

Annotated regions:
phrase: MKIVVAIGGSILLKEYDCKKFQEYSEILKSLASEHEIFVVVGGGKPAREYIGVVRELGAGEAQCDDIGIEVTRINAKLLLSALGDAAYQKVPHNFQEALEYSATGKIIVMGGTEPAHSTDAVSAILAEYIHADKLINLTSVDGMYDKDPNKYEDAKLIKEITASEMIEFISGKDTKAGTYEFFDMTAIQMIKRSSLETVIA
type: DOMAIN
name: Asp/Glu/Uridylate_kinase
description: Aspartate/glutamate/uridylate kinase
Protein sequence:
MRCPICHFPETDVIDTRKLYEGEVIRRRRKCRACGRRFTTYERIESVSLMVVKKDGTREPYDREKIARGVRTACYRRPVSADAIEQLVNEVETAVMATDQQEISSQFIGDAVMRRLRDLDEVAYIRFASVYRSFADIGKLREAVDELLEREGTRNGHSSAATTDQGTTDNHSRM

Annotated regions:
phrase: LMVVKKDGTREPYDREKIARGVRTACYRRPVSADAIEQLVNEVETAVMATDQQEISSQFIGDAVMRRLRDLDEVAYIRFASVYRSFADIG
type: DOMAIN
name: ATP-cone_dom
description: ATP-cone domain

phrase: MRCPICHFPETDVIDTRKLYEGEVIRRRRKCRACGRRFTTY
type: DOMAIN
name: NrdR-like_N
description: Transcriptional repressor NrdR-like, N-terminal domain

phrase: MVVKKDGTREPYDREKIARGVRTACYRRPVSADAIEQLVNEVETAVMATDQQEISSQFIGDAVMRRLRDLDEVAYIRFASVYRSFA
type: DOMAIN
name: ATP-cone_dom
description: ATP-cone domain
Protein sequence:
MLCLRRRTQIANPMINAVGETAEQAVKKLEKVFEVLKDRNERFPLTEISKQIDVIWESVFSVTHATAPQKKYELAEEFLNHPGVVKNLLMVFDGVQVETKRKIRDLLIFIRTWTSNDFLADAEGSLVPNPRQARPSQKFQDVLYECRFIMLHIVHEGYAGSDSIGLYNDIIRIFAEDDACLMFMLKDKGTDSNEVKQKFEGCVWAIFDRLFNTHTYRGFHILAEIFETFEIIFSQNHEASQYFFYNNLSRFSQSFHWLIAANNFFIQTKSLRFVRDIFSNRYMAEVRRQWMADPSLIKYVFLHLQSIHKTVCLEAVGLLNIFVQNPCNAPPIHKLISINRKLLLEYCRQNAPNPKDENQALDELFDETITYLVNWNEEEPAHEPTAQDTLKMRSIKLKMRREHTLELVQNEIPLFPRNNLLPTSPRQSSFVYNRRLPRVSSSRAGIRFGETRNVKGSPRSRSQSPRPPTGPEPSPRTTSYQNVRFPPEDSSR

Annotated regions:
Protein sequence:
MAEETIFSKIIRKEIPANIVYQDELVTAFRDISPQAKTHILIIPNKVIPTVNDVTEQDEVALGRLFSVAAKLAKEEGVAEDGYRLIVNCNKHGGQEVFHLHMHLVGGEPLGRMLAK

Annotated regions:
phrase: IFSKIIRKEIPANIVYQDELVTAFRDISPQAKTHILIIPNKVIPTVNDVTEQDEVALGRLFSVAAKLAKEEGVAEDGYRLIVNCNKHGGQEVFHLHMHLVGGEPLGRML
type: DOMAIN
name: HIT-like
description: HIT-like domain

phrase: RKEIPANIVYQDELVTAFRDISPQAKTHILIIPNKVIPTVNDVTEQDEVALGRLFSVAAKLAKEEGVAEDGYRLIVNCNKHGGQEVFHLHMHLVGG
type: DOMAIN
name: HIT-like
description: HIT-like domain

phrase: NCNKHGGQEVFHLHMHLV
type: CONSERVED_SITE
name: Histidine_triad_CS
description: Histidine triad, conserved site
Protein sequence:
MKLHELKNVKGAVHRKKRVGCGEGGGHGKTSGRGGKGQTARSGSSIRPGFEGGQMPLYRKLPHRGFNQYNFRTELPVVNVGDLASLDASITEVTAEVLAAQGLIRAGETSVKILGDGELSRALKVTAVKFSESAKAKIEKAGGQAITA

Annotated regions:
phrase: KILGDGELSRALKVTAVKFSESAKAKIEKA
type: CONSERVED_SITE
name: Ribosomal_uL15_CS
description: Large ribosomal subunit protein uL15, conserved site

phrase: VVNVGDLASLDASITEVTAEVLAAQGLIRAGETSVKILGDGELSRALKVTAVKFSESAKAKIEKAGGQ
type: DOMAIN
name: Ribosomal_uL15/eL18
description: Large ribosomal subunit protein uL15/eL18
Protein sequence:
MELGKSIENQNNVVARLAKKVIETDVANGSNVVFSPMSINVLLSLIAAGSNPVTKEEILSFLMSPSTDHLNAVLAKIADGGTERSDLCLSTAHGVWIDKSSYLKPSFKELLENSYKASCSQVDFATKPVEVIDEVNIWADVHTNGLIKQILSRDCTDTIKEIRNSTLILANAVYFKAAWSRKFDAKLTKDNDFHLLDGNTVKVPFMMSYKDQYLRGYDGFQVLRLPYVEDKRHFSMYIYLPNDKDGLAALLEKISTEPGFLDSHIPLHRTPVDALRIPKLNFSFEFKASEVLKDMGLTSPFTSKGNLTEMVDSPSNGDKLHVSSIIHKACIEVDEEGTEAAAVSVAIMMPQCLMRNPDFVADHPFLFTVREDNSGVILFIGQVLDPSKH

Annotated regions:
phrase: FVADHPFLFT
type: CONSERVED_SITE
name: Serpin_CS
description: Serpin, conserved site

phrase: ARLAKKVIETDVANGSNVVFSPMSINVLLSLIAAGSNPVTKEEILSFLMSPSTDHLNAVLAKIADGGTERSDLCLSTAHGVWIDKSSYLKPSFKELLENSYKASCSQVDFATKPVEVIDEVNIWADVHTNGLIKQILSRDCTDTIKEIRNSTLILANAVYFKAAWSRKFDAKLTKDNDFHLLDGNTVKVPFMMSYKDQYLRGYDGFQVLRLPYVEDKRHFSMYIYLPNDKDGLAALLEKISTEPGFLDSHIPLHRTPVDALRIPKLNFSFEFKASEVLKDMGLTSPFTSKGNLTEMVDSPSNGDKLHVSSIIHKACIEVDEEGTEAAAVSVAIMMPQCLMRNPDFVADHPFLFTVREDNSGVILFIGQVLD
type: DOMAIN
name: Serpin_dom
description: Serpin domain

phrase: NQNNVVARLAKKVIETDVANGSNVVFSPMSINVLLSLIAAGSNPVTKEEILSFLMSPSTDHLNAVLAKIADGGTERSDLCLSTAHGVWIDKSSYLKPSFKELLENSYKASCSQVDFATKPVEVIDEVNIWADVHTNGLIKQILSRDCTDTIKEIRNSTLILANAVYFKAAWSRKFDAKLTKDNDFHLLDGNTVKVPFMMSYKDQYLRGYDGFQVLRLPYVEDKRHFSMYIYLPNDKDGLAALLEKISTEPGFLDSHIPLHRTPVDALRIPKLNFSFEFKASEVLKDMGLTSPFTSKGNLTEMVDSPSNGDKLHVSSIIHKACIEVDEEGTEAAAVSVAIMMPQCLMRNPDFVADHPFLFTVREDNSGVILFIGQVLD
type: DOMAIN
name: Serpin_dom
description: Serpin domain
Protein sequence:
MKIIPCPSSPLLARRVAEAAGIEIGGAVFKKFPDGELYVRVMEKEGVVVGSINSNEDLIALIFALDVLENAKAVVPYMGYARQDKVFQEGEAVSIKIVAEMLESRADEVVTVNIHSSDAASHFSKLKNLDAMPLVGEYFAGKDVVMISPDKGSMERVKTAAKHAGCEWDYMEKRRIDATTVEITPKTIDVEGRDVVIVDDIISTGGTVAEAARILYGLGAKSVSAACVHAVLAENAAIKLFNAGIKDIIATDTVECAFSRISVAELIAENI

Annotated regions:
phrase: FAGKDVVMISPDKGSMERVKTAAKHAGCEWDYMEKRRIDATTVEITPKTIDVEGRDVVIVDDIISTGGTVAEAARILYGLGAKSVSAACVHAVLAE
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: AMPLVGEYFAGKDVVMISPDKGSMERVKTAAKHAGCEWDYMEKRRIDATTVEITPKTIDVEGRDVVIVDDIISTGGTVAEAARILYGLGAKSVSAACVHAVLAENAAIKLFNAGIKDIIATD
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: MKIIPCPSSPLLARRVAEAAGIEIGGAVFKKFPDGELYVRVMEKEGVVVGSINSNEDLIALIFALDVLENAKAVVPYMGYARQDKVFQEGEAVSIKIVAEMLE
type: DOMAIN
name: Pribosyltran_N
description: Ribose-phosphate pyrophosphokinase, N-terminal domain
Protein sequence:
MELNQLKSVPKARNHKTKTLGRGHGSGLGKTSGRGQKGQKARKSGLTRPGFEGGQTPLYRRLPKFGNARKGFLKQEWVVLNLNKIAKLKLDKINRASLIEKQVISAKSQLPIKLIGHTKLEKPLHFEVHKVSKQALKAVENANGSVKLLEK

Annotated regions:
phrase: LNLNKIAKLKLDKINRASLIEKQVISAKSQLPIKLIGHTKLEKPLHFEVHKVSKQALKAVENANGS
type: DOMAIN
name: Ribosomal_uL15/eL18
description: Large ribosomal subunit protein uL15/eL18
Protein sequence:
MLRWTTAGESHGRALVAMVEGMVAGVHVTTQDISAQLARRRLGYGRGARMKFEQDQVTMLTGLRHGVTLGGPIAIEIGNTEWPKWETVMAPDPVDPAVLADSAARNAPLTRPRPGHADYAGMLKYGFDDARPVLERASARETAARVAAGTVARAFLQQALGVEIVSHVISIGASKPYDGPPPQAADLTAIDASPVRAFDAASEALMIDEIEAAKRDGDTLGGVVEVVAHGLPVGLGSFTSGDNRLDSQLAGAVMGIQAIKGVEIGDGFETARRRGSVAHDEIYPGADGVMRSTNRAGGLEGGMTNGLPVRVRAAMKPISTVPRALATVDMATGEEAVAIHQRSDVCAVPAAAVVVETMVALVLARAVLEKFGGDSLAETRANIDSYLRAVATREPSTDGARASG

Annotated regions:
phrase: RSDVCAVPAAAVVVET
type: CONSERVED_SITE
name: Chorismate_synthase_CS
description: Chorismate synthase, conserved site

phrase: ERASARETAARVAAGT
type: CONSERVED_SITE
name: Chorismate_synthase_CS
description: Chorismate synthase, conserved site

phrase: GESHGRALVAMVEGM
type: CONSERVED_SITE
name: Chorismate_synthase_CS
description: Chorismate synthase, conserved site
Protein sequence:
MKLLYTDIQYNMIDILAGEAQLAAKAGKRVFYIAPNSLSFEKERAVLETLPERASFAITITRFEQMARYFVLNDIHQGETIDDNGLVMVFYRVLSSFSDQDLRVFGRLKQDAHFINQLVDLYKELKASNLTVLELNQLNSAEKQEDLIKIFTEVETILSAGHFDNQSKIAFFAQQIKFGHLDTALQDLTIVIDGFTRFSAEEENLIGLLHEKGVDIIIGTYISQKAYRSTFSNGNVYQASLDFIRGLAGKFQTKPEYVVSKQEALPAFTKLSQLFESCHDFSDSQLVLTDKDKEHVTIWDVINQKEEVEHVAKSIRRKLYEGHRYKDILVLLGDADAYKLQIGKIFDKYEIPYYFGKAESMSSHPLVHFVDSLERVKRYNFRAEDVMNLLKSGLYGKIRQNQLDKLEQYVIYADIKGKTKFFKDFTLDNHGQFDLKALNKLRAEVMSPLQELIKIQAQKGDSILQKLTNFLEAISLTNNFSKLIQGVSDTEQEKNEQVWKTFTVILEQFHTIFGQEKMKLADFLALLRSGMLAADYRTVPASVDVVTVKSYDLVEPHSNKFVFALGMTQSHFPKIVQNKSLISDEERAKINEATPDNRRFDIVTKENLKKNHFTALSLFNAATQELVLTLPQILNEAEDNTSSYLLELQDMGVPVVEKGGNRLAADPEDIGNYKALLSRVIELNRSAIDQELSKEEQTFWSVAVRYLRQKLAKEGLTIPEVNDKMQTKQVAAEVMAARFPIDQPLNLSSSALTTFYNNQYLYFLQYILGLQELETIHPDARNHGTYLHRVFELVMQDQSTDDFDSKLNRAIDITNHEDSFHLVYNEDEESRYALGILEDIARSTATVLKGDNPVQAESEEEAFELMLDQAVKIRGVIDRIDRLSDGSLGIVDYKSSKNTFDLQKFYNGLSPQLVTYIEALRSCKNLNDTDKIFGAMYLHMQEPKTDLANMKSIEKIPETVHKNLSYKGLFLEDEKAHLANGKYHLHDAVYSQKEVDLLLDYNKRLYRSAAKQIRKGNFLINPYSQDGKSVQGEQLKAITHFEADRHMPYARKLYQLPRKEKRQGFLALMQSKKEEEGNDL

Annotated regions:
phrase: LSSSALTTFYNNQYLYFLQYILGLQELETIHPDARNHGTYLHRVFELVMQDQSTDDFDSKLNRAIDITNHEDSFHLVYNEDEESRYALGILEDIARSTATVLKGDNPVQAESEEEAFELMLDQAVKIRGVIDRIDRLSDGSLGIVDYKSSKNTFDLQKFYNGLSPQLVTYIEALRSCKNLNDTDKIFGAMYLHMQEPKTDLANMKSIEKIPETVHKNLSYKGLFLEDEKAHLANGKYHLHDAVYSQKEVDLLLDYNKRLYRSAAKQIRKGNFLINPY
type: DOMAIN
name: PDDEXK_AddAB-type
description: PD-(D/E)XK endonuclease-like domain, AddAB-type

phrase: AKAGKRVFYIAPNSLSFEKERAVLETLPERASFAITITRFEQMARYFVLNDIHQGETIDDNGLVMVFYRVLSSFSDQDLRVFGRLKQDAHFINQLVDLYKELKASNLTVLELNQLNSAEKQEDLIKIFTEVETILSAGHFDNQSKIAFFAQQIKFGHLDTALQDLTIVIDGFTRFSAEEENLIGLLHEKGVDIIIGTYISQKAYRSTFSNGNVYQASLDFIRG
type: DOMAIN
name: ADDB_N
description: ATP-dependent helicase/deoxyribonuclease subunit B, N-terminal
Protein sequence:
MISWHELYMVLSAVVPLYVAMMVAYGSVRWWGVLTPEQCSGINRFVAVIAVPLLSFHFISSSDPYAMNLRFVAADTLQKVLVLAALAAWSRFPARFVPPAWPPLDCSITLFSVSTLPNTLVMGIPLLVSMYGPYSGDLMVQIVVLQSIVWYTLLLFLFEFRAARVLIAAQFPDTAASIAAVHVDPDVVSLEGSQAEAHAEVAPDGRLRMVVCRSSVSRRSAAAAATPRASNLTGVEIYSISSSRNATPRGSTFTLADIPGHQPPNSALRASSFGAADLFSLHSSSRQHTPRPSSFDEHAAARARASATVAPTNDLKDTHMIEWSSGASAASEVTGLPVFRSGRETRRLVPSDAPSIASSRVIRPPPGATGGERAASFNKAVGGQDELAKLEAGAKTEQQTTAVTTTTKGGGAAGAERARGQQNAPAGVMLRLILTTVWRRLIRNPNTYASLIGLTWSLIAFRFHITMPIIVAKSISILSDAGLGMAMFSLGLFMATQPKIIACGYSVAAASMGVRFFFGPAIMAAASAAVGIRGTLLRIAIVQAALPQGIVPFVFAKEYNLHATILCTLVIFGMLIALPITLVYYIILGLL

Annotated regions:
Protein sequence:
MTTGADAATERQDKPGGKLFIRPWIFIRGVPAMKFLPPEGPPEVAFAGRSNVGKSSLINGLVGRKGLARTSNTPGRTQELNYFVPEGYSGEAGDLPPMALVDMPGYGFAKAPKAQVDAWTKLVFDYLRGRVTLKRVYLLIDARHGIKKIDEEVMDLLDSAAVSYQIVLTKADKIKSPAVTKLVAETGQKIVKRPAAFPEVIATSSEKGEGLEELRAAIVHAVTAG

Annotated regions:
phrase: EVAFAGRSNVGKSSLINGLVGRKGLARTSNTPGRTQELNYFVPEGYSGEAGDLPPMALVDMPGYGFAKAPKAQVDAWTKLVFDYLRGRVTLKRVYLLIDARHGIKKIDEEVMDLLDSAAVSYQIVLTKADKIKSPAVTKLVAETGQKIVKRPAAFPEVIATSSEKGEGLEELRAAIV
type: DOMAIN
name: G_ENGB_dom
description: EngB-type guanine nucleotide-binding (G) domain

phrase: EVAFAGRSNVGKSSLINGLVGRKGLARTSNTPGRTQELNYFVPEGYSGEAGDLPPMALVDMPGYGFAKAPKAQVDAWTKLVFDYLRGRVTLKRVYLLIDARHGIKKIDEEVMDLLDSAAVSYQIVLT
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: GPPEVAFAGRSNVGKSSLINGLVGRKGLARTSNTPGRTQELNYFVPEGYSGEAGDLPPMALVDMPGYGFAKAPKAQVDAWTKLVFDYLRGRVTLKRVYLLIDARHGIKKIDEEVMDLLDSAAVSYQIVLTKADKIKSPAVTKLVAETGQKIVKRPAAFPEVIATSSEKGEGLEELRAAIVHAVT
type: DOMAIN
name: G_ENGB_dom
description: EngB-type guanine nucleotide-binding (G) domain
Protein sequence:
MIHKNWAELIKPTQLEVKPGNDPARQATLVAEPLERGFGLTLGNALRRILMSSLQGAAITSVQIDNVLHEFSSVAGVREDVTDIILNLKQVSLRMEVEGPKRLSINAKGPAVVTAGDIAETAGIEVLNREHVICHLDDGADLFMELTVNTGKGYVSAEKNKPEDAPIGLIPIDAIYSPVKKVSYDVQPTREGQVLDYDKLTLKVDTDGSITPEDALAFAARILQDQLSIFVNFDEPESAGRQDEDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLNEIKEVLSGMGLHLGMDVEDWPPDNIEELAKKFEDSF

Annotated regions:
phrase: VQIDNVLHEFSSVAGVREDVTDIILNLKQVSLRMEVEGPKRLSINAKGPAVVTAGDIAETAGIEVLNREHVICHLDDGADLFMELTVNTGKGYVSAEKNKPEDAPIGLIPIDAIY
type: DOMAIN
name: DNA-dir_RNA_pol_insert
description: DNA-directed RNA polymerase, insert domain

phrase: PLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLNEIKEVL
type: DOMAIN
name: RNAP_asu_C
description: RNA polymerase, alpha subunit, C-terminal

phrase: EPLERGFGLTLGNALRRILMSSLQGAAITSVQIDNVLHEFSSVAGVREDVTDIILNLKQVSLRMEVEGPKRLSINAKGPAVVTAGDIAETAGIEVLNREHVICHLDDGADLFMELTVNTGKGYVSAEKNKPEDAPIGLIPIDAIYSPVKKVSYDVQPTREGQVLDYDKLTLKVDTDGSITPEDALAFAARILQDQ
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: QATLVAEPLERGFGLTLGNALRRILMSSLQGAAITSVQIDNVLHEFSSVAGVREDVTDIILNLKQVSLRMEVEGPKRLSINAKGPAVVTAGDIAETAGIEVLNREHVICHLDDGADLFMELTVNTGKGYVSAEKNKPEDAPIGLIPIDAIYSPVKKVSYDVQPTREGQVLDYDKLTLKVDTDGSITPEDALAFAARILQDQLSIFVN
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type
Protein sequence:
MSQDFVEIAKIGATYKLNGELNLYSLANSIETLLSYGDWYIQLPATNVWQQLKGESVLKRADKVYIKLANINNADTAKKYVNALIGVPKRALPQLAEDEVYFKDLIGCSVKNINNDSFGVVVDIIETGANEVLVCKEDNSEYLIPYVKQYIVSEDLNSKKIVVDWEYDY

Annotated regions:
phrase: KDLIGCSVKNINNDSFGVVVDIIETGANEVLVCKEDNSEYLIPYVKQYIVSEDLNSKKIVVDW
type: DOMAIN
name: PRC_RimM
description: Ribosome maturation factor RimM, PRC barrel domain

phrase: IAKIGATYKLNGELNLYSLANSIETLLSYGDWYIQLPATNVWQQLKGESVLKRADKVYIKLANINNADTAKKYVNALIGVPK
type: DOMAIN
name: RimM_N
description: RimM, N-terminal
Protein sequence:
MRNHVISFENVVKQFDDEPVLKNVSFEIEEGKFYTLLGPSGCGKTTILRIIAGFNDVTSGDVYFDGKRINDVPANKRQVNTVFQDYALFPHMNVFDNVAFGLKIKKLSKAEIEKKVKEALRLVQLPGYETREISEMSGGQRQRVAIARAIVNEPKVLLLDEPLSALDLKLRTAMQYELRDLQQRLGITFIFVTHDQEEALAMSDEIFVMNKGHIVQSGTPVDIYDEPINHFVADFVGESNIVDGVMLEDNLVSFVGKKFECVDGGMRKNEPVEVVLRPEDLTITTLEKGKLTVTVDTQLFRGVHYEIICFDEQGNEWMVHSTRKAKEGAQVGLSFEPEDIHVMRFNESEEDFDARLESYDE

Annotated regions:
phrase: MSGGQRQRVAIARA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: LKNVSFEIEEGKFYTLLGPSGCGKTTILRIIAGFNDVTSGDVYFDGKRINDVPANKRQVNTVFQDYALFPHMNVFDNVAFGLKIKKLSKAEIEKKVKEALRLVQLPGYETREISEMSGGQRQRVAIARAIVNEPKVLLLDEP
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: EGKFYTLLGPSGCGKTTILRIIAGFNDVTSGDVYFDGKRINDVPANKRQVNTVFQDYALFPHMNVFDNVAFGLKIKKLSKAEIEKKVKEALRLVQLPGYETREISEMSGGQRQRVAIARAIVNEPKVLLLDEPLSALDLKLRTAMQYELRDLQQRLGITFIFVTHDQEEALAMSDEIFVMNKG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: ISFENVVKQFDDEPVLKNVSFEIEEGKFYTLLGPSGCGKTTILRIIAGFNDVTSGDVYFDGKRINDVPANKRQVNTVFQDYALFPHMNVFDNVAFGLKIKKLSKAEIEKKVKEALRLVQLPGYETREISEMSGGQRQRVAIARAIVNEPKVLLLDEPLSALDLKLRTAMQYELRDLQQRLGITFIFVTHDQEEALAMSDEIFVMNKGHIVQSGTPVDIYDEPINHFVADFV
type: DOMAIN
name: PotA_ATP-bd
description: PotA, ATP-binding domain

phrase: VVLRPEDLTITTLEKGKLTVTVDTQLFRGVHYEIICFDEQGNEWMVHSTRKAKEGAQVGLSFEPEDIHV
type: DOMAIN
name: Transp-assoc_OB_typ2
description: Transport-associated OB, type 2

phrase: ISFENVVKQFDDEPVLKNVSFEIEEGKFYTLLGPSGCGKTTILRIIAGFNDVTSGDVYFDGKRINDVPANKRQVNTVFQDYALFPHMNVFDNVAFGLKIKKLSKAEIEKKVKEALRLVQLPGYETREISEMSGGQRQRVAIARAIVNEPKVLLLDEPLSALDLKLRTAMQYELRDLQQRLGITFIFVTHDQEEALAMSDEIFVMNKGHIVQSGTPVDIYDEPINHFVADF
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain
Protein sequence:
MAKKVENIVKLQIPAGKATPAPPVGPALGQAGINIMGFTKEFNARTADQAGMIIPVVISVYEDKSFDFVTKTPPAAVLLKKAAGVDKGSGEPNKTKVASVTRAQVQEIAETKMPDLNAANLESAMRMIEGTARSMGFTVTD

Annotated regions:
phrase: VKLQIPAGKATPAPPVGPALGQAGINIMGFTKEFNARTADQAGMIIPVVISVYEDKS
type: DOMAIN
name: Ribosomal_uL11_N
description: Large ribosomal subunit protein uL11, N-terminal

phrase: KTPPAAVLLKKAAGVDKGSGEPNKTKVASVTRAQVQEIAETKMPDLNAANLESAMRMIEGTARSMGFT
type: DOMAIN
name: Ribosomal_uL11_C
description: Large ribosomal subunit protein uL11, C-terminal

phrase: RMIEGTARSMGFTVT
type: CONSERVED_SITE
name: Ribosomal_uL11_CS
description: Large ribosomal subunit protein uL11, conserved site
Protein sequence:
MILASNSQRRQEILKDAGFNFKVITSNIEEISDKKNITERILDIAEKKLEQIAKNNINEFVLAADTVVELDGKILGKPKNREEAFRFLKSLSGKVHRVITAYVFKNISKNILIREVVVSEVKFFDLDDDTINWYLDTDEPFDKAGAYGIQGYGRILVEKINGDYYSIMGFPISNFLENLRKIGYKISLIDKI

Annotated regions:
Protein sequence:
MKLLLLALPMLVLLPQVIPAYSGEKKCWNRSGHCRKQCKDGEAVKDTCKNLRACCVPSNEDHRRVPTTSPTPLSDSTRGVIDDILTVRFTTDYFEVSSKKNMVEESEVGQGTQTSLPNVHHSS

Annotated regions:
phrase: KCWNRSGHCRKQCKDGEAVKDTCKNLRAC
type: DOMAIN
name: Beta_defensin_dom
description: Beta-defensin domain
Protein sequence:
MKKYVCVVCGYIYDPAEGDPDNGVNPGTSFEDIPDDWVCPLCGVGKDQFEPSEE

Annotated regions:
phrase: IPDDWVCPLC
type: BINDING_SITE
name: Rubredoxin_Fe_BS
description: Rubredoxin, iron-binding site

phrase: KYVCVVCGYIYDPAEGDPDNGVNPGTSFEDIPDDWVCPLCGVGKDQ
type: DOMAIN
name: Rubredoxin_dom
description: Rubredoxin domain

phrase: MKKYVCVVCGYIYDPAEGDPDNGVNPGTSFEDIPDDWVCPLCGVGKDQFEP
type: DOMAIN
name: Rubredoxin-like_dom
description: Rubredoxin-like domain

phrase: KYVCVVCGYIYDPAEG
type: DOMAIN
name: Rubredoxin_dom
description: Rubredoxin domain

phrase: IPDDWVCPLCGVGKDQ
type: DOMAIN
name: Rubredoxin_dom
description: Rubredoxin domain

phrase: KYVCVVCGYIYDPAEGDPDNGVNPGTSFEDIPDDWVCPLCGVGKDQFEP
type: DOMAIN
name: Rubredoxin_dom
description: Rubredoxin domain
Protein sequence:
MKYKVMFFGTPEIAKIVLETLFNMHEVDLIAVVSQPDAHFDRKKNVIYSPVKQFCLDHNIKLFQPEKIKEIEEEIRILGPDIIITCAFGQFINQGIIDIPKYKIVNIHASLLPKLRGGAPIHYAILNGELKTGITLMHTIKKMDAGNILFQRSLEINDCTTTKSLTLELANLSALMIKEHFLELVKPNLVGIQQDENSVSFAYNIQKDQNIINFDQPAFFINRFVNAMYDKPIAIMQYNGVSIKVYQVKITNQKSCQKPGTIMIFKNQLFVSTQDFDIELLLIQLPNKKPLSPKVLLNGKNPFIN

Annotated regions:
phrase: VMFFGTPEIAKIVLETLFNMHEVDLIAVVSQPDAHFDRKKNVIYSPVKQFCLDHNIKLFQPEKIKEIEEEIRILGPDIIITCAFGQFINQGIIDIPKYKIVNIHASLLPKLRGGAPIHYAILNGELKTGITLMHTIKKMDAGNILFQRSLEINDCTTTKSLTLEL
type: DOMAIN
name: Formyl_transf_N
description: Formyl transferase, N-terminal

phrase: INFDQPAFFINRFVNAMYDKPIAIMQYNGVSIKVYQVKITNQKSCQKPGTIMIFKNQLFVSTQDFDIELLLIQLPNKKPL
type: DOMAIN
name: Met-tRNA-FMT_C
description: Methionyl-tRNA formyltransferase, C-terminal domain

phrase: NIQKDQNIINFDQPAFFINRFVNAMYDKPIAIMQYNGVSIKVYQVKITNQKSCQKPGTIMIFKNQLFVSTQDFDIELLLIQLPNKKPLSPKVLLNG
type: DOMAIN
name: Formyl_trans_C
description: Formyl transferase, C-terminal

phrase: YKVMFFGTPEIAKIVLETLFNMHEVDLIAVVSQPDAHFDRKKNVIYSPVKQFCLDHNIKLFQPEKIKEIEEEIRILGPDIIITCAFGQFINQGIIDIPKYKIVNIHASLLPKLRGGAPIHYAILNGELKTGITLMHTIKKMDAGNILFQRSLEINDCTTTKSLTLELANLSALMIKEHFLELVKPNLVGIQQDENSVSFAYN
type: DOMAIN
name: Met-tRNA-FMT_N
description: Methionyl-tRNA formyltransferase, N-terminal domain
Protein sequence:
MADHAILAGKRVLLVIAGGIAAYKCLELIRRLRERGASVRAVMTAAAARFVTPLSVQALTEDTVYQDMWSLTDESEMGHIRLSREADLLVVAPATADLLARMAAGMADDLPATVLLATDKPVLVAPAMNVRMWQHAATQANLALLESRGVWRVGPNEGAMACNEYGPGRMAEPMEIVDAIARILAGDLRKPLAGRRAVVTSGPTHEPIDPVRYIANRSSGRQGHAIAAALAQLGAEVTLVSGPTRLPDPPGCTVRHIETAREMLAACEAALPADIAVCAAAVADWHVAGPSDRKLKKDGGGPPALELAENPDILATLSAPGGRRPALVIGFAAETGDVLAYATAKRARKGCDWIVANDVSPGTGTFGGSDNTVHLIRADAVESWPTMTKEAVAARLAEAAAAYFERI

Annotated regions:
phrase: LAGRRAVVTSGPTHEPIDPVRYIANRSSGRQGHAIAAALAQLGAEVTLVSGPTRLPDPPGCTVRHIETAREMLAACEAALPADIAVCAAAVADWHVAGPSDRKLKKDGGGPPALELAENPDILATLSAPGGRRPALVIGFAAETGDVLAYATAKRARKGCDWIVANDVSPGTGTFGGSDNTVHL
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal

phrase: KRVLLVIAGGIAAYKCLELIRRLRERGASVRAVMTAAAARFVTPLSVQALTEDTVYQDMWSLTDESEMGHIRLSREADLLVVAPATADLLARMAAGMADDLPATVLLATDKPVLVAPAMNVRMWQHAATQANLALLESRGVWRVGPNEGAMACNEYGPGRMAEPMEIVDAIA
type: DOMAIN
name: Flavoprotein
description: Flavoprotein
Protein sequence:
MAVFTELFWITLKIMALVVPLMLAVAYLTYAERRVIGAMQDRRGPNRVGYQGLLQPIADALKLVMKEISIPSNANRVLFVIAPLLAIMPALAAWAVIPVAEGWAIADINAGLLYILAMTSLGVYGIIIAGWASNSKYALLGTLRASAQVVSYEIAMGFALVGVLMAAGSMNLGQIIQAQAGGIFHWFWLPLLPLFLVYWISGVAETNRAPFDVAEGESEIVAGFHVEYSGTSFAVFFLAEYANMILISAVAAVMFLGGWYSPFHGWPILGPMLDWVPGVVWFMLKTAFFMFCYLWFRATFPRYRYDQIMRLGWKVLIPVTVVWLIVLTIFIVTGFGPWF

Annotated regions:
phrase: GLLQPIADALKLVMK
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_su1_CS
description: NADH:ubiquinone oxidoreductase, subunit 1, conserved site

phrase: PFDVAEGESEIVA
type: CONSERVED_SITE
name: NADH_UbQ_OxRdtase_su1_CS
description: NADH:ubiquinone oxidoreductase, subunit 1, conserved site
Protein sequence:
MSNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYADGWIFKIKASNESELESLLDATAYEALLEDE

Annotated regions:
phrase: TYTVGITEHAQELLGDMVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYADGWIFKI
type: DOMAIN
name: Biotin_lipoyl
description: Biotin/lipoyl attachment

phrase: GATVSAGDDCAVAESVKAASDIYAPVSGE
type: BINDING_SITE
name: 2-oxoA_DH_lipoyl-BS
description: 2-oxo acid dehydrogenase, lipoyl-binding site
Protein sequence:
MTTQFSVAGIELELFRYPASQESNLQAWDAADEHLINSLIEGGQIAVPTAIINDSFGALSCALSRINPNWPLRVETDARTSFLGTEQNHHRNQLPMDNLQWFTSRDTLPKDVALVLMKLPKNLTYFAHQLMRLSQILPAGCRVLVGAKAKSINSSLLALFAKHLGPANASLAWKKTRVITCISDGKPRALPNGITWNIPEFNLTISNLSNVFAANKLDIGARIMLDNLPQGKFNTVVDLGCGNGVLGLRAAQLYPNADIHFIDDSEMAVASAKANWTMNQLAEGKGHFHWDDCMTHLPEDIEPDLVLCNPPFHQGEAITDHIAWQMFLDARRRLKNGGILHIVGNRHLAYHVKLQRLFKNCTTVASNGKFVILQAQK

Annotated regions:
phrase: LTISNLSNVFAANKLDIGARIMLDNLPQGKFNTVVDLGCGNGVLGLRAAQLYPNADIHFIDDSEMAVASAKANWTMNQLAEGKGHFHWDDCMTHLPEDIEPDLVLCNPPFHQGEAITDHIAWQMFLDARRRLKNGGILHIVGNRHLAYHVKLQRLFKNCTTVASNGKFVIL
type: DOMAIN
name: Small_mtfrase_dom
description: Methyltransferase small domain

phrase: VLCNPP
type: CONSERVED_SITE
name: DNA_methylase_N6_adenine_CS
description: DNA methylase, N-6 adenine-specific, conserved site
Protein sequence:
MAETLGTMKRSHYCGEIRETDINSKAVLMGWAQRRRDLGGVIFIDLRDHTGLAQIVIDAKNVDEADFVKAERIRSEYVIAVEGVIEKRDPETVNPLLETGTVELRASKLKILSEAKTPPFAIEEKSSVREELRLKHRYLDLRRPDLLHNLKMRQKMTQAVREFLMGQRFLEVETPVLTKSTPEGARDYLVPSRVFKGSFYALPQSPQIYKQLLMVGGVDRYFQVARCFRDEDLRADRQPEFTQVDMEMSFVDEVEIESLLETLFASVFKTVLGKDIALPMRRMTWLEAMDKYGVDKPDLRFGMEIVDLTDIAATCSFEVFKKVTASGGVVRAINAKGYGDLTRTEIEFLTQKAVSYGGKGMAWISVRENGELYSVLTKFFKKEELDDMIERLDGKPGDFIIFSADRLEAVRSILGSLRLDLADLRHLRRKDDFAFLIVTDFPLLEWDAEENRYVAMHHPFTMPMEADLPLLEKEPLKVRAKAYDVVLNGVELGSGSIRIHQRELQKRMFKLLGFSETSAQERFGFMLDAFQYGAPPHGGFAFGLDRLMMLVVGADSIRDVIAFPKMRDGSCAMSQSPSRVSQSQLKELDLLSGSKDYVHVEPEKPLVSEEDVDYVAALARLELNEEEKEELTRNLRDIIAFADKLNELDVSGLDPMAHVMPIENVFRADFLGISDDRELILKAAPAQKDGCYFVPKAVE

Annotated regions:
phrase: FKKVTASGGVVRAINAKGYGDLTRTEIEFLTQKAVSYGGKGMAWISVRENGELYSVLTKFFKKEELDDMIERLDGKPGDFIIFSADRLEAV
type: DOMAIN
name: GAD_dom
description: GAD domain

phrase: VLMGWAQRRRDLGGVIFIDLRDHTGLAQIVIDAKNVDEADFVKAERIRSEYVIAVEGVIEKRDPETVNPLLETGTVELRASKLKI
type: DOMAIN
name: NA-bd_OB_tRNA
description: OB-fold nucleic acid binding domain, AA-tRNA synthetase-type

phrase: RSHYCGEIRETDINSKAVLMGWAQRRRDLGGVIFIDLRDHTGLAQIVIDAKNVDEADFVKAERIRSEYVIAVEGVIEKRDPETVNPLLETGTVELRASKLKILSEAKTPPFAIEEKSSVREELRLKHRYLDLRRPD
type: DOMAIN
name: Asp-tRNA-ligase_1_N
description: Aspartate-tRNA ligase, type 1, anticodon recognition domain

phrase: LKMRQKMTQAVREFLMGQRFLEVETPVLTKSTPEGARDYLVPSRVFKGSFYALPQSPQIYKQLLMVGGVDRYFQVARCFRDEDLRADRQPEFTQVDMEMSFVDEVEIESLLETLFASVFKTVLGKDIALPMRRMTWLEAMDKYGVDKPDLRFGMEIVDLTDIAATCSFEVFKKVTASGGVVRAINAKGYGDLTRTEIEFLTQKAVSYGGKGMAWISVRENGELYSVLTKFFKKEELDDMIERLDGKPGDFIIFSADRLEAVRSILGSLRLDLADLRHLRRKDDFAFLIVTDFPLLEWDAEENRYVAMHHPFTMPMEADLPLLEKEPLKVRAKAYDVVLNGVELGSGSIRIHQRELQKRMFKLLGFSETSAQERFGFMLDAFQYGAPPHGGFAFGLDRLMMLVVGADSIRDVIAF
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: LKMRQKMTQAVREFLMGQRFLEVETPVLTKSTPEGARDYLVPSRVFKGSFYALPQSPQIYKQLLMVGGVDRYFQVARCFRDEDLRADRQPEFTQVDMEMSFVDEVEIESLLETLFASVFKTVLGKDIALPMRRMTWLEAMDKYGVDKPDLRFGMEIVDLTDIAATCSFEVFKKVTASGGVVRAINAKGYGDLTRTEIEFLTQKAVSYGGKGMAWISVRENGELYSVLTKFFKKEELDDMIERLDGKPGDFIIFSADRLEAVRSILGSLRLDLADLRHLRRKDDFAFLIVTDFPLLEWDAEENRYVAMHHPFTMPMEADLPLLEKEPLKVRAKAYDVVLNGVELGSGSIRIHQRELQKRMFKLLGFSETSAQERFGFMLDAFQYGAPPHGGFAFGLDRLMMLVVGADSIRDVIAFP
type: DOMAIN
name: AspRS_core
description: Aspartate-tRNA ligase, type 1, core domain

phrase: EELRLKHRYLDLRRPDLLHNLKMRQKMTQAVREFLMGQRFLEVETPVLTKSTPEGARDYLVPSRVFKGSFYALPQSPQIYKQLLMVGGVDRYFQVARCFRDEDLRADRQPEFTQVDMEMSFVDEVEIESLLETLFASVFKTVLGKDIALPMRRMTWLEAMDKYGVDKPDLRFGMEIVDLTDIAATCSFEVFKKVTASGGVVRAINAKGYGDLTRTEIEFLTQKAVSYGGKGMAWISVRENGELYSVLTKFFKKEELDDMIERLDGKPGDFIIFSADRLEAVRSILGSLRLDLADLRHLRRKDDFAFLIVTDFPLLEWDAEENRYVAMHHPFTMPMEADLPLLEKEPLKVRAKAYDVVLNGVELGSGSIRIHQRELQKRMFKLLGFSETSAQERFGFMLDAFQYGAPPHGGFAFGLDRLMMLVVGADSIRDVIAFPKM
type: DOMAIN
name: Aa-tRNA-synt_II
description: Aminoacyl-tRNA synthetase, class II (D/K/N)