nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MNAPFHQLADAILAGTPATPEDALAVLRADDAELMSVVAAAGRLRRAHFGNTVKVNYLVNLKSGLCPENCNYCSQALGSDAPILKYSWLSKDETLKQTGAGLRGGASRVCLVSSGRGPSTRDIDKVTEMVVALKEEYPGVEVCACLGLLKDGQAQRLKDAGVDAYNHNINTAESNHDNIVQTHTYADRVDTVEKAKGGGLSPCSGLIAGLGETDEQLVEALFALRELGSDSIPVNFLMPFDGTPFENTWELSPTRCVKILAMARFVCPDKEIRIAGGREMHLRSLQSIALQVANSVFLGDYLTSEGQDAKADLEMIRDNGFVVLGSEEDLAQQAREPIDPAIRQRGAGTDVVPNA

Annotated regions:
phrase: NTVKVNYLVNLKSGLCPENCNYCSQALGSDAPILKYSWLSKDETLKQTGAGLRGGASRVCLVSSGRGPSTRDIDKVTEMVVALKEEYPGVEVCACLGLLKDGQAQRLKDAGVDAYNHNINTAESNHDNIVQTHTYADRVDTVEKAKGGGLSPCSGLIAGLGETDEQLVEALFALRELGSDSIPVNFLMPFDGTPFENTWELSPTRCVKILAMARFVCPDKEIRI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LCPENCNYCSQALGSDAPILKYSWLSKDETLKQTGAGLRGGASRVCLVSSGRGPSTRDIDKVTEMVVALKEEYPGVEVCACLGLLKDGQAQRLKDAGVDAYNHNINTAESNHDNIVQTHTYADRVDTVEKAKGGGLSPCSGLIAGLGETDEQLVEA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: FHQLADAILAGTPATPEDALAVLRADDAELMSVVAAAGRLRRAHFGNTVKVNYLVNLKSGLCPENCNYCSQALGSDAPILKYSWLSKDETLKQTGAGLRGGASRVCLVSSGRGPSTRDIDKVTEMVVALKEEYPGVEVCACLGLLKDGQAQRLKDAGVDAYNHNINTAESNHDNIVQTHTYADRVDTVEKAKGGGLSPCSGLIAGLGETDEQLVEALFALRELGSDSIPVNFLMPFDGTPFENTWELSPTRCVKILAMARFVCPDKEIRIAGGREMHLRSLQSIALQVANSVFLGDYLTSEGQDAKADLEMIRDNGFV
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: PVNFLMPFDGTPFENTWELSPTRCVKILAMARFVCPDKEIRIAGGREMHLRSLQSIALQVANSVFLGDYLTSEGQDAKADLEMIRDNGFV
type: DOMAIN
name: BATS_dom
description: Biotin and thiamin synthesis-associated domain

phrase: PVNFLMPFDGTPFENTWELSPTRCVKILAMARFVCPDKEIRIAGGREMHLRSLQSIALQVANSVFLGDYLTSEGQDAKADLEMIRDNG
type: DOMAIN
name: BATS_dom
description: Biotin and thiamin synthesis-associated domain

phrase: NYLVNLKSGLCPENCNYCSQALGSDAPILKYSWLSKDETLKQTGAGLRGGASRVCLVSSGRGPSTRDIDKVTEMVVALKEEYPGVEVCACLGLLKDGQAQRLKDAGVDAYNHNINTAESNHDNIVQTHTYADRVDTVEKAKGGGLSPCSGLIAGLGETDEQLVEALFALRELGSDSIPVNFLMPFDGTPFENTWELSPTRCVKILAMAR
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain
Protein sequence:
MGNKWSKSSLGGCGGWSNVRERMRRTEPAAEGVGAASQDLEKHGALTTSNTATNNAACAWLEAQEEEEEVGFPVRPQVPLRPMTFKAAFDLSFFLKEKGGLEGLIWSKKRQEILDLWVYNTQGFFPDWQNYTPGPGIRYPLTFGWCFKLVPVDPKEVEASNEGENNCLLHPMSQHGMEDDEEREVLKWKFDSHLAYKHVARELHPEFYKDC

Annotated regions:
Protein sequence:
MNKWLALLFCSFSAIAAPKDTLSERLAMSEGFSATFNQQVLSPEGKVILTGNGKVDIARPSLFRWETETPDENLLVSDGTTLWHFDPFVEQVTLYRAEEALEQTPFVLLTRNKASDWDAYHVEEKGDVFTLTPTALDSNQGRFQITISEKGVVQGFKVIEQDGQQSEFTFSKVKQQKPNASVFNYKVPKGVEVDDQRN

Annotated regions:
Protein sequence:
MDLNSASTVVLQVLTQATSQDTAVLKPAEEQLKQWETQPGFYSVLLNIFTNHTLDINVRWLAVLYFKHGIDRYWRRVAPHALSEEEKTTLRAGLITNFNEPINQIATQIAVLIAKVARLDCPRQWPELIPTLIESVKVQDDLRQHRALLTFYHVTKTLASKRLAADRKLFYDLASGIYNFACSLWNHHTDTFLQEVSSGNEAAILSSLERTLLSLKVLRKLTVNGFVEPHKNMEVMGFLHGIFERLKQFLECSRSIGTDNVCRDRLEKTIILFTKVLLDFLDQHPFSFTPLIQRSLEFSVSYVFTEVGEGVTFERFIVQCMNLIKMIVKNYAYKPSKNFEDSSPETLEAHKIKMAFFTYPTLTEICRRLVSHYFLLTEEELTMWEEDPEGFTVEETGGDSWKYSLRPCTEVLFIDIFHEYNQTLTPVLLEMMQTLQGPTNVEDMNALLIKDAVYNAVGLAAYELFDSVDFDQWFKNQLLPELQVIHNRYKPLRRRVIWLIGQWISVKFKSDLRPMLYEAICNLLQDQDLVVRIETATTLKLTVDDFEFRTDQFLPYLETMFTLLFQLLQQVTECDTKMHVLHVLSCVIERVNMQIRPYVGCLVQYLPLLWKQSEEHNMLRCAILTTLIHLVQGLGADSKNLYPFLLPVIQLSTDVSQPPHVYLLEDGLELWLVTLENSPCITPELLRIFQNMSPLLELSSENLRTCFKIINGYIFLSSTEFLQTYAVGLCQSFCELLKEITTEGQVQVLKVVENALKVNPILGPQMFQPILPYVFKGIIEGERYPVVMSTYLGVMGRVLLQNTSFFSSLLNEMAHKFNQEMDQLLGNMIEMWVDRMDNITQPERRKLSALALLSLLPSDNSVIQDKFCGIINISVEGLHDVMTEDPETGTYKDCMLMSHLEEPKVTEDEEPPTEQDKRKKMLALKDPVHTVSLQQFIYEKLKAQQEMLGEQGFQSLMETVDTEIVTQLQEFLQGF

Annotated regions:
phrase: AEEQLKQWETQPGFYSVLLNIFTNHTLDINVRWLAVLYFKHGIDRYWRRVAPHALSEEEKTTLRAGLITNFN
type: DOMAIN
name: Importin-beta_N
description: Importin-beta, N-terminal domain

phrase: AEEQLKQWETQPGFYSVLLNIFTNHTLDINVRWLAVLYFKHGIDRYWRRVAPHALSEEEKTTLRAGLITNFN
type: DOMAIN
name: Importin-beta_N
description: Importin-beta, N-terminal domain

phrase: AEEQLKQWETQPGFYSVLLNIFTNHTLDINVRWLAVLYFKHGIDRYWRRVAPHALSEEEKTTLRAGLITN
type: DOMAIN
name: Importin-beta_N
description: Importin-beta, N-terminal domain
Protein sequence:
MAFLKKSLFLVLFLGLVSLSICEEEKRENKDEIEQEDDEQSEEKRALWKDILKNVGKAAGKAVLNTVTDMVNQGEQ

Annotated regions:
phrase: ALWKDILKNVGKAAGKAVLNTV
type: DOMAIN
name: Dermaseptin_dom
description: Dermaseptin domain

phrase: AFLKKSLFLVLFLGLVSLSICEEEKRENKDEIEQEDDEQSEEK
type: DOMAIN
name: Frog_antimicrobial_propeptide
description: Frog antimicrobial peptide, propeptide
Protein sequence:
MSQLPIPLPLNESRWRYVTASGGGMTVAFLAGSGGSITLLSPEGENVSFRYGGVGGGIGLGMRLPRFGKVNLNVKGKSVGGAGALEALPSTGTVLVADGLVGRDLSRGDFTGPCMYVELGAGVIAGGSGTAILFGLDPKLLAAVALASASPLTAALGASMSRQLLQSSRGALLMAGVNVGAQFGGGAAAYLGALF

Annotated regions:
Protein sequence:
MSDEAQRLKIVFVGHVDHGKSTLIGRILHDTGSLPEGKIAAIQQACEAERMEFEYAFLLDALLEEQAQNITIDTTQIPFRTALRRYVIIDAPGHKEFLKNMITGAASADAAMLVIAANEGVREQSRRHAYLLSLLGVRQIIVVVNKLDLANYSEQAFREIEGEYRQFLSELGMTAREFVPASAKQGENVARRTDPALQWYSGHTVLEALDHVESTAALPNQPLRFCVQDIYRFDARRIIAGKIESGSLRVGDQLIFSPANKSSAVATIESWNSPAPEEAIAGDSVGITLREQIFVERGHVASHENDAPIETNRCRADIFWMAEEPLRKETEYILRVATQELKCKVVAIEQVMDSSTLATEIGERERLARNEVGRVTLQTRAPLVVDNHDRIPALGRFVLVDGGRICGGGIVFGGVYTDRTTVKSKNIFWSEGEITPTHRAKQNGHRGAVVWLTGLSGAGKSTIALALEGELFQRAMHTYVLDGDNVRHGLNSNLGFSAEDRVENIRRVGEVAKLMADSGTVVITAFISPYRLDRRRAREIALEGNAEFIEVFVDAPLQVCEERDPKHLYKKARAGQIRDFTGIDAPYEAPDDPDIVVRTDEQNVDESVATIMEQLLPRLRADDPID

Annotated regions:
phrase: AQRLKIVFVGHVDHGKSTLIGRILHDTGSLPEGKIAAIQQACEAERMEFEYAFLLDALLEEQAQNITIDTTQIPFRTALRRYVIIDAPGHKEFLKNMITGAASADAAMLVIAANEGVREQSRRHAYLLSLLGVRQIIVVVNKLDLANYSEQAFREIEGEYRQFLSELGMTAREFVPASAKQGENVARRTDPALQWYSGHTVLEALDHVESTAALPNQP
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: LKIVFVGHVDHGKSTLIGRILHDTGSLPEGKIAAIQQACEAERMEFEYAFLLDALLEEQAQNITIDTTQIPFRTALRRYVIIDAPGHKEFLKNMITGAASADAAMLVIAANEGVREQSRRHAYLLSLLGVRQIIVVVNKLDLANYSEQAFREIEGEYRQFLSELGMTAREFVPASAKQGENVARRTDPALQWYSGHTVLEALD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: RLKIVFVGHVDHGKSTLIGRILHDTGSLPEGKIAAIQQACEAERMEFEYAFLLDALLEEQAQNITIDTTQIPFRTALRRYVIIDAPGHKEFLKNMITGAASADAAMLVIAANEGVREQSRRHAYLLSLLGVRQIIVVVNKLDLANYSEQAFREIEGEYRQFLSELGMTAREFVPASAKQGENV
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: CRADIFWMAEEPLRKETEYILRVATQELKCKVVAIEQVMDSSTLATEIGERERLARNEVGRVTLQTRAPLVVDNHDRIPALGRFVLVDGGRICGGGI
type: DOMAIN
name: GTP-eEF1A_C
description: GTP-eEF1A, C-terminal domain

phrase: KIVFVGHVDHGKS
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: AQNITIDT
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: VIIDAPGHKE
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: TGAASADAAML
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: IIVVVNKLD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: TNRCRADIFWMAEEPLRKETEYILRVATQELKCKVVAIEQVMDSSTLATEIGERERLARNEVGRVTLQTRAPLVVDNHDRIPALGRFVLVDGGRICGGGI
type: DOMAIN
name: CysN_NoDQ_III
description: Sulfate adenylyltransferase subunit CysN, Domain III
Protein sequence:
MQAYFDQLDRVRYEGSKSSNPLAFRHYNPDELVLGKRMEEHLRFAACYWHTFCWNGADMFGVGAFNRPWQQPGEALALAKRKADVAFEFFHKLHVPFYCFHDVDVSPEGASLKEYINNFAQMVDVLAAKQEESGVKLLWGTANCFTNPRYGAGAATNPDPEVFSWAATQVVTAMEATHKLGGENYVLWGGREGYETLLNTDLRQEREQLGRFMQMVVEHKHKIGFQGTLLIEPKPQEPTKHQYDYDAATVYGFLKQFGLEKEIKLNIEANHATLAGHSFHHEIATAIALGLFGSVDANRGDAQLGWDTDQFPNSVEENALVMYEILKAGGFTTGGLNFDAKVRRQSTDKYDLFYGHIGAMDTMALALKIAARMIEDGELDKRIAQRYSGWNSELGQQILKGQMSLADLAKYAQEHNLSPVHQSGRQEQLENLVNHYLFDK

Annotated regions:
Protein sequence:
MVGQLQGGQAAGQQQQQQQATQQQQHSKQQQQQQQQQQQQLQLKQHQQQQQDILYQQHNEAIAIARGLQAATPADIGDNQPYYDTSGNVDWERAMGAGGAGAYGGIGIGSLPAAGGAAYHLGPANPAGLVSRHLDYGDGGHLAGPSAGLPAGAVGSGAGAGAGAGASVTGSGSGAGTGTGTGAGSGSGSGAAGKEVRYAPFPVASPTHSIPTTSQQIVGSVGGVGVGGASSQSISGGVPTHSQSNTTGALQRTHSRSMSSIPPPEPFMIAQSKAVNSRVSINVGGVRHEVLWRTLERLPHTRLGRLRECTTHEAIVELCDDYSLADNEYFFDRHPKSFSSILNFYRTGKLHIVDEMCVLAFSDDLEYWGVDELYLESCCQHKYHQRKENVHEEMRKEAESLRQRDEEEFGEGKFSEYQKYLWELLEKPNTSFAARVIAVISILFIVLSTIALTLNTLPQLQHIDNGTPQDNPQLAMVEAVCITWFTLEYILRFSASPDKWKFFKGGLNIIDLLAILPYFVSLFLLETNKNATDQFQDVRRVVQVFRIMRILRVLKLARHSTGLQSLGFTLRNSYKELGLLMLFLAMGVLIFSSLAYFAEKDEKDTKFVSIPEAFWWAGITMTTVGYGDICPTTALGKVIGTVCCICGVLVVALPIPIIVNNFAEFYKNQMRREKALKRREALDRAKREGSIVSFHHINLKDAFAKSMDLIDVIVDTGKQTNVVHPKGKRQSTPNIGRQTLDVQSAPGHNLSQTDGNSTEGESTSGRNPATTGTGCYKNYDHVANLRNSNLHNRRGSSSEQDAVPPYSFDNPNARQTSMMAMESYRREQQALLQQQQQQQQQMLQMQQIQQKAPNGNGGATGGGVANNLAMVAASSAATAVATATNASNASNTAPGSEGAEGGGDGDGGGVDDDNLSQAKGLPIQMMITPGEVAELRRQVALENLQNQRMDNLEQDVPVEFECCFCTTKGLPGCHGECIPLRANSV

Annotated regions:
phrase: VSINVGGVRHEVLWRTLERLPHTRLGRLRECTTHEAIVELCDDYSLADNEYFFDRHPKSFSSILNFYRTGKLHIVDEMCVLAFSDDLEYWGVDELYLES
type: DOMAIN
name: T1-type_BTB
description: Potassium channel tetramerisation-type BTB domain

phrase: SRVSINVGGVRHEVLWRTLERLPHTRLGRLRECTTHEAIVELCDDYSLADNEYFFDRHPKSFSSILNFYRTGKLHIVDEMCVLAFSDDLEYWGVDELYLESCCQHKYHQ
type: DOMAIN
name: BTB/POZ_dom
description: BTB/POZ domain

phrase: RVIAVISILFIVLSTIALTLNTLPQLQHIDNGTPQDNPQLAMVEAVCITWFTLEYILRFSASPDKWKFFKGGLNIIDLLAILPYFVSLFLLETNKNATDQFQDVRRVVQVFRIMRILRVLKLARHSTGLQSLGFTLRNSYKELGLLMLFLAMGVLIFSSLAYFAEKDEKDTKFVSIPEAFWWAGITMTTVGYGDICPTTALGKVIGTVCCICGVLVVALPIPIIVNNFAEFYKN
type: DOMAIN
name: Ion_trans_dom
description: Ion transport domain
Protein sequence:
MIELKTLLDLPLHFLHLKQIHCLLLTSPIFYTRRDLFLSRLLRRCCTAATQFRYARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQMRLPDELEDVTAES

Annotated regions:
phrase: KNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACA
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: KDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLK
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: RNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACA
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: VTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPN
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: VTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAA
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: TTLIDLYVKCGCLEEAILVFERLHEKN
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: YTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPN
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: HKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWI
type: REPEAT
name: E_motif
description: E motif

phrase: DVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVA
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: NSLISGYSSSGLFDFASRLFD
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: YACMVDLFGRKGLLEEAKALIERM
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: NVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVS
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat

phrase: NVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVA
type: REPEAT
name: Pentatricopeptide_rpt
description: Pentatricopeptide repeat
Protein sequence:
MSKPANNLQDIFLNGARKNRIPVIVYLTNGFQIRGIVKGFDNFTVILECDGKQMMVYKHALSTITPSKAILFNTPAGTDDRS

Annotated regions:
phrase: DIFLNGARKNRIPVIVYLTNGFQIRGIVKGFDNFTVILECDGKQMMVYKHALSTITPSKA
type: DOMAIN
name: Sm
description: Sm domain
Protein sequence:
MAKLHDFYRESVVPELMKEFSYNSVMQVPRIDKITLNMGVGEALADKKVLDNAVADLEAISGQKPIRTVARKSVAGFKVREGFPIGCKVTLRGERMWDFLQRLISIAIPRIRDFRGLNPKSFDGRGNYSMGVREQIIFPEVDYDKVDKVRGLDITITTNAGTDDEARALLAAFNFPFRK

Annotated regions:
phrase: LEAISGQKPIRTVARK
type: CONSERVED_SITE
name: Ribosomal_uL5_CS
description: Large ribosomal subunit protein uL5, conserved site

phrase: SVMQVPRIDKITLNMGVGEALADKKVLDNAVADLEAISGQKPIRTVARKSVAGFKV
type: DOMAIN
name: Ribosomal_uL5_N
description: Large ribosomal subunit protein uL5, N-terminal

phrase: PIGCKVTLRGERMWDFLQRLISIAIPRIRDFRGLNPKSFDGRGNYSMGVREQIIFPEVDYDKVDKVRGLDITITTNAGTDDEARALLAAFNFP
type: DOMAIN
name: Ribosomal_uL5_C
description: Large ribosomal subunit protein uL5, C-terminal
Protein sequence:
MIEIEKPRIETVEISEDSKFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVKNIEIEGVLHEFSAIENVVEDVTSIIMNIKKLALKIYSDEDKTLEIDVKDEGVVTAKDIMHDSDVEILNPDLKIATVSKGGHLKMRLIANAGRGYTLAEDNNTSDLPIGVIPVDSIYTPVERVNYQVENTRVGQSTNFDKLTLDVWTDGSITPQEAISLGAKIMTEHLNIFVDLTDEAQNAEIMIEKEEDHKEKVLEMSIEELDLSVRSYNCLKRAGINSVQELADKSEADMMKVRNLGRKSLEEVKFKLEDLGLGLRKED

Annotated regions:
phrase: EPLERGYGTTLGNSLRRILLSSLPGAAVKNIEIEGVLHEFSAIENVVEDVTSIIMNIKKLALKIYSDEDKTLEIDVKDEGVVTAKDIMHDSDVEILNPDLKIATVSKGGHLKMRLIANAGRGYTLAEDNNTSDLPIGVIPVDSIYTPVERVNYQVENTRVGQSTNFDKLTLDVWTDGSITPQEAISLGAKIMTEH
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: FGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVKNIEIEGVLHEFSAIENVVEDVTSIIMNIKKLALKIYSDEDKTLEIDVKDEGVVTAKDIMHDSDVEILNPDLKIATVSKGGHLKMRLIANAGRGYTLAEDNNTSDLPIGVIPVDSIYTPVERVNYQVENTRVGQSTNFDKLTLDVWTDGSITPQEAISLGAKIMTEHLNIFVD
type: DOMAIN
name: DNA-dir_RNA_pol_RpoA/D/Rpb3
description: DNA-directed RNA polymerase, RpoA/D/Rpb3-type

phrase: IEIEGVLHEFSAIENVVEDVTSIIMNIKKLALKIYSDEDKTLEIDVKDEGVVTAKDIMHDSDVEILNPDLKIATVSKGGHLKMRLIANAGRGYTLAEDNNTSDLPIGVIPVDSIY
type: DOMAIN
name: DNA-dir_RNA_pol_insert
description: DNA-directed RNA polymerase, insert domain

phrase: KEEDHKEKVLEMSIEELDLSVRSYNCLKRAGINSVQELADKSEADMMKVRNLGRKSLEEVKFKL
type: DOMAIN
name: RNAP_asu_C
description: RNA polymerase, alpha subunit, C-terminal
Protein sequence:
MSQIVTRFAPSPTGFLHIGGARTALFNWLYARHTGGKMLLRIEDTDRQRSTKEAIAAIIEGLEWLGITCDGDPIYQFARAERHRAAVEEMLAKGNAYRCYATPQELDEMRELARKEGRPPRYDGRWRDRDPSEAPKDRDPVIRLRAPQEGETVIDDMVQGTVTFPNKDLDDLVLLRSDGNPTYMLAVVVDDHDMGVTHVIRGDDHLTNAARQTQIYRALGWEVPRMAHIPLIHGPDGAKLSKRHGALGVDAYRDMGYLPAALRNYLVRLGWSHGDQEVFSTEEMVSFFDLDKVGRSAARFDFQKLESLNGHYMRASSDAELLSAIDALVPHLPDAEHRLARMTPERRAQLAAAMPGLKERAKTLVELVDNAEFIFVERPLPLDDKAAALLSPEARAHLARLVPALEQVEWTAAATEAAVRAYAEAQGVKLGAVAQPLRAALTGKPTSPPIFDVLMVLGRDESLARLKDQAA

Annotated regions:
phrase: IVTRFAPSPTGFLHIGGARTALFNWLYARHTGGKMLLRIEDTDRQRSTKEAIAAIIEGLEWLGITCDGDPIYQFARAERHRAAVEEMLAKGNAYRCYATPQELDEMRELARKEGRPPRYDGRWRDRDPSEAPKDRDPVIRLRAPQEGETVIDDMVQGTVTFPNKDLDDLVLLRSDGNPTYMLAVVVDDHDMGVTHVIRGDDHLTNAARQTQIYRALGWEVPRMAHIPLIHGPDGAKLSKRHGALGVDAYRDMGYLPAALRNYLVRLGWSHGDQEVFSTEEMVSFFDLDKVGRSAARFDFQKLESLNGHYM
type: DOMAIN
name: GluRS_core
description: Glutamyl-tRNA synthetase

phrase: TPERRAQLAAAMPGLKERAKTLVELVDNAEFIFVERPLPLDDKAAALLSPEARAHLARLVPALEQVEWTAAATEAAVRAYAEAQGVKLGAVAQPLRAALTGKPTSPPIFDVLMVLGRDESLARLK
type: DOMAIN
name: aa-tRNA-synth_I_cd-bd
description: Aminoacyl-tRNA synthetase, class I, anticodon-binding

phrase: PSPTGFLHIGG
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: QIVTRFAPSPTGFLHIGGARTALFNWLYARHTGGKMLLRIEDTDRQRSTKEAIAAIIEGLEWLGITCDGDPIYQFARAERHRAAVEEMLAKGNAYRCYATPQELDEMRELARKEGRPPRYDGRWRDRDPSEAPKDRDPVIRLRAPQEGETVIDDMVQGTVTFPNKDLDDLVLLRSDGNPTYMLAVVVDDHDMGVTHVIRGDDHLTNAARQTQIYRALGWEVPRMAHIPLIHGPDGAKLSKRHGALGVDAYRDMGYLPAALRNYLVRLGWSHGDQEVFSTEEMVSFFDLDKVGRSAARFDFQKL
type: DOMAIN
name: Glu/Gln-tRNA-synth_Ib_cat-dom
description: Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain
Protein sequence:
MEEEGHKSLTSHLPQSSSSLSQSREIAKEFTSNIPPPTIKTNSSSSNILKPRLSLQNEVNQLKPAKFPSKMLPPGSLASVKSSSLAKKARPFTASSNPRMPKSAHPISSRSVSASSHFGRPASAVSSSLNSSDDVRSMSDESMESYNDEKSVNASALRTTEDRLRSMEMAYAQLSAKVIPSPSKRPANYKFYEQRIAMLEESLEVERSRTSELQEQFSVALREKAEAEANKIVSQKGMESLEIMLNSMKSENHQRMAMLEENHARVMETAELQHQAELQDFASNIEQKANSLIMEYKNELQSAEEHFSHKIKELTSENELKISRLQEEKDSLLKKVQEGASLAMQRVQNKHDLEKKRLQSAIQPLQEENNSLKQQIEQLQRELASETVVKENLKSSLDQQSANVQKLESTNRALESTIKTLEEDVYTMKNKIIELEGILKSANVERDGLVEKLIAEETLRRKLHNTIQELKGNIRVFCRVRPPLGDGESAQIAFPDQNSEASTIEIVAQAPGSSLTGNGIKQYAFNFDRVFSPETTNEDVFNELSQLIQSAMDGYNVCIFAYGQTGSGKTHTMSSNTGMIPSSVRMIYNRSTSLKERGWEYRMEGQFLEIYNETIIDLLASGNEEEKGKKKLEIYHDTKAGRTTITNITSEPLDTPEQVTWLLDQASKNRSVAATNANEHSSRSHSVFMLHLNGSNSTTGETCRSTLNLIDLAGSERLSSSQSVGERLKETQAINKSLSCLGDVIHALGSGKEGTYIPYRNSKLTNLL

Annotated regions:
phrase: TLNLIDLAGSERLSSSQS
type: DOMAIN
name: Kinesin_motor_dom
description: Kinesin motor domain

phrase: IPYRNSKLTNL
type: DOMAIN
name: Kinesin_motor_dom
description: Kinesin motor domain

phrase: TNANEHSSRSHSVFMLH
type: DOMAIN
name: Kinesin_motor_dom
description: Kinesin motor domain

phrase: GYNVCIFAYGQTGSGKTHTMS
type: DOMAIN
name: Kinesin_motor_dom
description: Kinesin motor domain

phrase: NIRVFCRVRPPLGDGESAQIAFPDQNSEASTIEIVAQAPGSSLTGNGIKQYAFNFDRVFSPETTNEDVFNELSQLIQSAMDGYNVCIFAYGQTGSGKTHTMSSNTGMIPSSVRMIYNRSTSLKERGWEYRMEGQFLEIYNETIIDLLASGNEEEKGKKKLEIYHDTKAGRTTITNITSEPLDTPEQVTWLLDQASKNRSVAATNANEHSSRSHSVFMLHLNGSNSTTGETCRSTLNLIDLAGSERLSSSQSVGERLKETQAINKSLSCLGDVIHALGSGKEGTYIPYRNSKLTNL
type: DOMAIN
name: Kinesin_motor_dom
description: Kinesin motor domain

phrase: KGNIRVFCRVRPPLGDGESAQIAFPDQNSEASTIEIVAQAPGSSLTGNGIKQYAFNFDRVFSPETTNEDVFNELSQLIQSAMDGYNVCIFAYGQTGSGKTHTMSSNTGMIPSSVRMIYNRSTSLKERGWEYRMEGQFLEIYNETIIDLLASGNEEEKGKKKLEIYHDTKAGRTTITNITSEPLDTPEQVTWLLDQASKNRSVAATNANEHSSRSHSVFMLHLNGSNSTTGETCRSTLNLIDLAGSERLSSSQSVGERLKETQAINKSLSCLGDVIHALGSGKEGTYIPYRNSKLTNL
type: DOMAIN
name: Kinesin_motor_dom
description: Kinesin motor domain

phrase: RVRPPLGDGESAQIAFPDQNSEASTIEIVAQAPGSSLTGNGIKQYAFNFDRVFSPETTNEDVFNELSQLIQSAMDGYNVCIFAYGQTGSGKTHTMSSNTGMIPSSVRMIYNRSTSLKERGWEYRMEGQFLEIYNETIIDLLASGNEEEKGKKKLEIYHDTKAGRTTITNITSEPLDTPEQVTWLLDQASKNRSVAATNANEHSSRSHSVFMLHLNGSNSTTGETCRSTLNLIDLAGSERLSSSQSVGERLKETQAINKSLSCLGDVIHALGSGKEGTYIPYRNSKLTNL
type: DOMAIN
name: Kinesin_motor_dom
description: Kinesin motor domain

phrase: STLNLIDLAGS
type: CONSERVED_SITE
name: Kinesin_motor_CS
description: Kinesin motor domain, conserved site
Protein sequence:
LAAMSEDVSCLKAQLEEKEREIAALKNKLSLLEKVVLDLHDKVTPLTPLRAKHALSNEDIMRYSRQLLLPDLGVRGQLNLSKTSVLIVGCGGLGCPLAQYLAAAGIGRLGLLDYDEVELSNLHRQVLHGEENQGQAKALSAANAVRRLNSTVECVPYHLQLSPENALQLIQQYDIVADCSDNVPTRYLVSDACVLSGKPLVSASALRMDGQLTVYNYRGGPCYRCLYPAPPPPETVTNCSDGGVLGVVPGIMGCFQALEVIKIASGQGSSFGQQLLMFDAQDARFRSIKLRPRQAGCAVCGEEPSVTQLVDYEAFCGSAATDKVDYKSILDDAGPHLLLDVRPLVEVDICHLPFSLNIPLSSLEERKSEHLQLLRERVGQLKRQMAGGGRPPVYVICKQGNDSQKAVQLLEKMSGSELDHVTVKDISGGLMAWARTVDPTFPQY

Annotated regions:
phrase: YSRQLLLPDLGVRGQLNLSKTSVLIVGCGGLGCPLAQYLAAAGIGRLGLLDYDEVELSNLHRQVLHGEENQGQAKALSAANAVRRLNSTVECVPYHLQLSPENALQLIQQYDIVADCSDNVPTRYLVSDACVLSGKPLVSASALRMDGQLTVYNYRGGPCYRCLYPAPPPPETVTNCSDGGVLGVVPGIMGCFQALEVIKIASGQGSSFGQQLLMFDAQDARFRSIKLRPRQAGC
type: DOMAIN
name: ThiF_NAD_FAD-bd
description: THIF-type NAD/FAD binding fold

phrase: YKSILDDAGPHLLLDVRPLVEVDICHLPFSLNIPLSSLEERKSEHLQLLRERVGQLKRQMAGGGRPPVYVICKQGNDSQKAVQLLEKMSGSELDHVTVKDISGGLMAWA
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain

phrase: DKVDYKSILDDAGPHLLLDVRPLVEVDICHLPFSLNIPLSSLEERKSEHLQLLRERVGQLKRQMAGGGRPPVYVICKQGNDSQKAVQLLEKMSGSELDHVTVKDISGGLMAWARTVD
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain

phrase: DAGPHLLLDVRPLVEVDICHLPFSLNIPLSSLEERKSEHLQLLRERVGQLKRQMAGGGRPPVYVICKQGNDSQKAVQLLEKMSGSELDHVTVKDISGGLMAWARTVDPTF
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain
Protein sequence:
MKYLEIAVEVESCFTETVADIFWEFNTGGVSIEDPLLLWQYINAQIWDAYEFPDSVLKAERATVRAYFPLTENINTLLSQINERLKSLGIPFNLYFQEVDEESWANSWKKYFKPVEVGEFLIKPTWEKLPSGKEDKKIIEIDPGMAFGTGTHVTTALVLEALPKYVSPGKVVVDVGTGSGILAIASALLGAEKIYALDIDPVAVKVARENISINRLEDKITVIENDLLHGFNQTVDVIIANIIAAVIKELALDAYEKLATGGIFIGSGIIVEREKEVMDKLLEVGFKIIERKNSGGWCLLVARKE

Annotated regions:
Protein sequence:
MSITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTAEDTVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFSNPNVKDECGCGESFHV

Annotated regions:
phrase: MSITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEFVDEPTAEDTVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFSNPNVKDECGCG
type: DOMAIN
name: FeS_biogenesis
description: FeS cluster biogenesis

phrase: FKFSNPNVKDECGCGES
type: CONSERVED_SITE
name: FeS_cluster_insertion_CS
description: FeS cluster insertion, C-terminal, conserved site
Protein sequence:
MQQMVPASGYDRAITIFSPEGRLYQVEYAREAVRRGTTAVGIKCNDGVVLAVDRRITSKLIDVSSIEKIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRHSARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYDENMIVSEGMELALYALSKTTEELKPENIDMAIVKDSGKLVEKISVDEIEKIVKAVYKKVEAEEAEAEKNKVEEDIE

Annotated regions:
phrase: YDRAITIFSPEGRLYQVEYARE
type: DOMAIN
name: Proteasome_asu_N
description: Proteasome alpha-subunit, N-terminal domain

phrase: YDRAITIFSPEGRLYQVEYARE
type: DOMAIN
name: Proteasome_asu_N
description: Proteasome alpha-subunit, N-terminal domain

phrase: YDRAITIFSPEGRLYQVEYARE
type: DOMAIN
name: Proteasome_asu_N
description: Proteasome alpha-subunit, N-terminal domain
Protein sequence:
MEKNEISEERRTQEKEKQHGHRLNIRRLGRKELTELLTRLGEPAYRANQLHRWLYSNQALRFEEMSTLSKQLRQKLASEWIIHPASLVGTERETTDASLVTGNPTAKFLIKLEDNELVESVLIPSEERITACISSQIGCPLRCTFCATGHMGFRRNLTASEITDQVFLLEKEAQKRHWRGLTNIVFMGMGEPLLNLDNVLESIGTLTEKDYQFSISERKITISTVGLPVEMDRIARSGLKTKLAISLHSADQLIRERMMPIAADITLDKLAKAINSYNSVTSQPVTLVYMLLEGINDSPEDARKLVRFAKRVLCKINLIDYNSIVTLKFKPGCSSSKTMFIQQLLDAGLLVTVRKSQGATINAACGQLATRPVR

Annotated regions:
phrase: ITACISSQIGCPLRCTFCATGHMGFRRNLTASEITDQVFLLEKEAQKRHWRGLTNIVFMGMGEPLLNLDNVLESIGTLTEKDYQFSISERKITISTVGLPVEMDRIARSGLKTKLAISLHSADQLIRERMMPIAADITLDKLAKAINSYNSVTSQPVTLVYMLLEGINDSPEDARKLVRFAKRVLCKINLIDYNSIVTLKFKPGCSSSKTMFIQQLLDAGLLVTV
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: SSQIGCPLRCTFCATGHMGFRRNLTASEITDQVFLLEKEAQKRHWRGLTNIVFMGMGEPLLNLDNVLESIGTLTEKDYQFSISERKITISTVGLPVEMDRIARSGLKTKLAISLHSADQLIRERMMPIAADITLDKLAKAINSYNSVTSQPVTLVYMLLEGINDSPEDARK
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SEERITACISSQIGCPLRCTFCATGHMGFRRNLTASEITDQVFLLEKEAQKRHWRGLTNIVFMGMGEPLLNLDNVLESIGTLTEKDYQFSISERKITISTVGLPVEMDRIARSGLKTKLAISLHSADQLIRERMMPIAADITLDKLAKAINSYNSVTSQPVTLVYMLLEGINDSPEDARKLVRFAKRVLCKINLIDYNSIVTLKFKPGCSSSKTMFIQQLLDAGLLVTVRKSQGA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: HRLNIRRLGRKELTELLTRLGEPAYRANQLHRWLYSNQALRFEEMSTLSKQLRQKLASEWIIHPASLVGTERETTDASLVTGNPTAKFLIKLEDNELVESVLIPSEERITACISSQIGCPLRCTFCATGHMGFRRNLTASEITDQVFLLEKEAQKRHWRGLTNIVFMGMGEPLLNLDNVLESIGTLTEKDYQFSISERKITISTVGLPVEMDRIARSGLKTKLAISLHSADQLIRERMMPIAADITLDKLAKAINSYNSVTSQPVTLVYMLLEGINDSPEDARKLVRFAKRVLCKINLIDYNSIVTLKFKPGCSSSKTMFIQQLLDAGLLVTVRKSQGATINAACGQLAT
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: NIRRLGRKELTELLTRLGEPAYRANQLHRWLYSNQALRFEEMSTLSKQLRQKLASEW
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain