nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MASFRLLLLCLAGLVFVSEASPAGAGESKCPLMVKVLDAVRGSPAANVGVKVFKKAADETWEPFASGKTSDSGELHGLTTEDKFVEGLYKVELDTKSYWKSLGISPFHEYAEVVFTANDSGLRHYTIAALLSPYSYSTTALVSSPKE

Annotated regions:
phrase: ESKCPLMVKVLDAVRGSPAANVGVKVFKKAADETWEPFASGKTSDSGELHGLTTEDKFVEGLYKVELDTKSYWKSLGISPFHEYAEVVFTANDSGLRHYTIAALLSPYSYSTTALVSSPK
type: DOMAIN
name: Transthyretin/HIU_hydrolase_d
description: Transthyretin/hydroxyisourate hydrolase domain

phrase: AGAGESKCPLMVKVLDAVRGSPAANVGVKVFKKAADETWEPFASGKTSDSGELHGLTTEDKFVEGLYKVELDTKSYWKSLGISPFHEYAEVVFTANDSGLRHYTIAALLSPYSYSTT
type: DOMAIN
name: Transthyretin/HIU_hydrolase_d
description: Transthyretin/hydroxyisourate hydrolase domain

phrase: KVLDAVRGSPAANVG
type: BINDING_SITE
name: Thyroxine_BS
description: Transthyretin, thyroxine binding site

phrase: VKVLDAVRGSPAANVGVKVFKKAADETWEPFASGKTSDSGELHGLTTEDKFVEGLYKVELDTKSYWKSLGISPFHEYAEVVFTANDSGLRHYTIAALLSPYSYS
type: DOMAIN
name: Transthyretin/HIU_hydrolase_d
description: Transthyretin/hydroxyisourate hydrolase domain

phrase: YTIAALLSPYSY
type: CONSERVED_SITE
name: Transthyretin_CS
description: Transthyretin, conserved site
Protein sequence:
MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSPKSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVKSFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSMDFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQIVLTGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIIIALIDRLALFAHREDGPGIPTDIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMKCYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKHFHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDSIMNLVSTLIQDQPDQPVEEPDPEDFADEQSLVGRFIHLLRSEDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLAFRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKLLKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLFIEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLRRESPESEGPIYEGLIL

Annotated regions:
Protein sequence:
MGLSTRDILDMGSLSRKDISLVLDTARSMKEISLRPVKKVPTLRGKTVVSFFYEPSTRTKVSFDVAAKRLSADSISLSVATSSMTKGETLLDTVKNLERMSPDVVVIRHSSAGVPHMLARHVSVPVINAGDGMHAHPSQALLDMMTVQEKKGRIEGLRLAIIGDIARSRVARSNVEGFLKMGASVVLAAPPTMIPVGVETFGADVTHNVDEAIAGADVIMMLRIQKERAAAFLFSTVREYARTYGLTANRLKNAKKDVLIMHPGPVNRGVEIAPEVADGPYSVILDQVENGVAVRMALFYLVMGGQRDAGD

Annotated regions:
phrase: RDILDMGSLSRKDISLVLDTARSMKEISLRPVKKVPTLRGKTVVSFFYEPSTRTKVSFDVAAKRLSADSISLSVATSSMTKGETLLDTVKNLERMSPDVVVIRHSSAGVPHMLARHVSVPVINAGDGMHAHPSQALLDMMTVQ
type: DOMAIN
name: Asp/Orn_carbamoyltranf_P-bd
description: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding

phrase: EGLRLAIIGDIARSRVARSNVEGFLKMGASVVLAAPPTMIPVGVETFGADVTHNVDEAIAGADVIMMLRIQKERAAAFLFSTVREYARTYGLTANRLKNAKKDVLIMHPGPVNRGVEIAPEVADGPYSVILDQVENGVAVRMALFY
type: DOMAIN
name: Asp_carbamoyltransf_Asp/Orn-bd
description: Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain
Protein sequence:
MAHLILIRHGQSLWNAANKFTGWVDVPLSERGRAEATIASCKLRDYRVNVCFTSMLMRAIETAVITLTECDDICGGKIPIIKHEADDENWHGWDNYDGDPAAELPIYPTATLDERYYGDLQGLDKAETTAKYGKEQVQIWRRSYSVRPPGGESLEDTRKRVYPYFTNRILGHIKQGDNVLVAAHGNSLRSIIMILETLSEEEVPKVELATGVPIVYELDKAAHMLSKAVLTN

Annotated regions:
phrase: LIRHGQSLW
type: ACTIVE_SITE
name: PG/BPGM_mutase_AS
description: Phosphoglycerate/bisphosphoglycerate mutase, active site
Protein sequence:
MKNVLSIQSHVVFGYAGNKSATFPMQLMGVDVWALNTVQFSNHTQYGKWTGMVIPKEQIGEIIRGIDEIGELKNCNAVVSGYLGSAEQVDEIIKAVEKVKSLNPQALYLCDPVMGHPDKGCIVADGVKEGLINLAVSHADILTPNLVELREISGLPVENFEQAIEAVKVIRAKGPKTVLIKHLSKVGKYADKFEMLLANDEGIWHLTRPLYTFAKEPVGVGDLTAGLFLANKVNGKSDLEAFEHMANAVNEVMKTTFELNSYELQLIAARKLIVNPVSSVKAVKIA

Annotated regions:
phrase: LKNCNAVVSGYLGSAEQVDEIIKAVEKVKSLNPQALYLCDPVMGHPDKGCIVADGVKEGLINLAVSHADILTPNLVELREISGLPVENFEQAIEAVKVIRAKGPKTVLIKHLSKVGKYADKFEMLLANDEGIWHLTRPLYTFAKEPVGVGDLTAGLFLANKVNGKSDLEAFEHMANAVNEVMKTTFELNS
type: DOMAIN
name: PM/HMP-P_kinase-1
description: Pyridoxamine kinase/Phosphomethylpyrimidine kinase
Protein sequence:
MKKNKRLMVMAGGTGGHVFPGLAVAKKLQQQGWEIRWLGTADRMEAELVPKHGIDIDFIKVKGLRGQGIKRLVLAPFQILNAIFQAKAHIKRWQPDAVLGMGGYVSGPGGIAAWLSGIPVVLHEQNAVAGLTNHWLAKIAKKVFQAFPGAFKDAPVVGNPVREDVVALPDPMQRMQDREGAVRILVMGGSQGARILNQTMPQVMAQLGSGFEIRHQAGKGSADEVRLAYQQVGVEHVEVSEFIDDVAAQYAWADLLVCRSGALTVSEVSAAGVGAIFIPFMHKDRQQALNADHLVACGAALMIEQPQLTVDKLAGEIQKLGRDTLLSMALHARAAAQNNADQVVADAIVALTEQK

Annotated regions:
phrase: MVMAGGTGGHVFPGLAVAKKLQQQGWEIRWLGTADRMEAELVPKHGIDIDFIKVKGLRGQGIKRLVLAPFQILNAIFQAKAHIKRWQPDAVLGMGGYVSGPGGIAAWLSGIPVVLHEQNAVAGLTNHWLAKIAKKV
type: DOMAIN
name: GlycoTrans_28_N
description: Glycosyltransferase family 28, N-terminal domain

phrase: ILVMGGSQGARILNQTMPQVMAQLGSGFEIRHQAGKGSADEVRLAYQQVGVEHVEVSEFIDDVAAQYAWADLLVCRSGALTVSEVSAAGVGAIFIPFMHKDRQQALNADHLVACGAALMIEQPQLTVDKLAGEIQKLGRDTLLS
type: DOMAIN
name: Glyco_trans_28_C
description: Glycosyl transferase, family 28, C-terminal
Protein sequence:
MESGPRAELGAGAPPAVVARTPPEPRPSPEGDPSPPPPPMSALVPDTPPDTPPAMKNATSSKQLPLEPESPSGQVGPRPAPPQEESPSSEAKSRGPTPPAMGPRDARPPRRSSQPSPTAVPASDSPPTKQEVKKAGERHKLAKERREERAKYLAAKKAVWLEKEEKAKALREKQLQERRRRLEEQRLKAEQRRAALEERQRQKLEKNKERYEAAIQRSVKKTWAEIRQQRWSWAGALHHSSPGHKTSGSRCSVSAVNLPKHVDSIINKRLSKSSATLWNSPSRNRSLQLSAWESSIVDRLMTPTLSFLARSRSAVTLPRNGRDQGRGCDPGRGPTWGRAGASLARGPQPDRTHPSAAVPVCPRSASASPLTPCSVTRSVHRCAPAGERGERRKPNAGGSPAPVRRRPEASPVQKKEKKDKERENEKEKSALARERSLKKRQSLPASPRARLSASTASELSPKSKARPSSPSTSWHRPASPCPSPGPGHTLPPKPPSPRGTTASPKGRVRRKEEAKESPSAAGPEDKSQSKRRASNEKESAAPASPAPSPAPSPTPAPPQKEQPPAETPTDAAVLTSPPAPAPPVTPSKPMAGTTDREEATRLLAEKRRQAREQREREEQERRLQAERDKRMREEQLAREAEARAEREAEARRREEQEAREKAQAEQEEQERLQKQKEEAEARSREEAERQRLEREKHFQQQEQERQERRKRLEEIMKRTRKSEVSETKQKQDSKEANANGSSPEPVKAVEARSPGLQKEAVQKEEPIPQEPQWSLPSKELPASLVNGLQPLPAHQENGFSTNGPSGDKSLSRTPETLLPFAEAEAFLKKAVVQSPQVTEVL

Annotated regions:
Protein sequence:
MNRTLRYFLLFGFLFLALTGIFNMFNNPNPKMEPIRYDEFVTALDEGKVDSAELQPMQLVYEVKGTMKGYEEGESFITNIPMDDQNVLNKISDLAKEGHEFSYEKAPETSMFASFFMGLLPFIIIIILFFFLLNQAQGGGGGGRMMNFGKSKAKLHTDEAKKVSFNDVAGADEEKQELVEVVDFLKDARKFEKIGARIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFETAKKNSPCIIFIDEIDAVGRQRGAGVGGGHDEREQTLNQLLVEMDGFEGNEGIIIIAATNREDVLDPALLRPGRFDRRITVGVPDVRGREAVLKVHARNKPLDESVNLQAIAQRTPGFSGADLENLLNEAALVAARRGKLKIDMADVDEGMDRVIAGPAKTTRVISEKERTTVAHHEAGHVVIGLTLDDARVVHKVTIIPRGRAGGYAVMLPKEDRGLQTKNELLDQIAGLLGGRVAEDIMFGDVSTGAHNDFQQATGIARAMVTEYGMSDLIGPVQFSQEQSQVFLGRDIGGGNSYSQEVAATIDAEVQRILKEQYERTRTILTERKELLQLIAETLLEEETLDREQILHLEEHGTLPERAYDQRDAIEETAIDADERPVEETIVEDVPTDGSLPEPKSIREAKERDEIERPNDEVDQSVDPIDRPSQKDESSDKS

Annotated regions:
phrase: IPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFETAKKNSPCIIFIDEIDAVGRQRGAGVGGGHDEREQTLNQLLVEMDGFEGNEGIIIIAATNREDVLDPALLRPGRFDRRITVGVP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: SVNLQAIAQRTPGFSGADLENLLNEAALVAARRGKLKIDMADVD
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: RVISEKERTTVAHHEAGHVVIGLTLDDARVVHKVTIIPRGRAGGYAVMLPKEDRGLQTKNELLDQIAGLLGGRVAEDIMFGDVSTGAHNDFQQATGIARAMVTEYGMSDLIGPVQFSQEQSQVFLGRDIGGGNSYSQEVAATIDAEVQRILKEQYERTRTILTERKELLQLIAETLLEEETLDREQIL
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: VLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFETAKKNSPCIIFIDEIDAVGRQRGAGVGGGHDEREQTLNQLLVEMDGFEGNEGIIIIAATNREDVLDPALLRPGRFDRRITV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: IIIIAATNREDVLDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: LLFGFLFLALTGIFNMFNNPNPKMEPIRYDEFVTALDEGKVDSAELQPMQLVYEVKGTMKGYEEGESFITNIPMDDQNVLNKISDLAKE
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular
Protein sequence:
MNTQQLAKLRSIVPEMRRVRHIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNPVTQQLTSLGATIFFNHRPENVRDASVVVVSSAISADNPEIVAAHEARIPVIRRAEMLAELMRFRHGIAIAGTHGKTTTTAMVSSIYAEAGLDPTFVNGGLVKAAGVHARLGHSRYLIAEADESDASFLHLQPMVAIVTNIEADHMDTYHGDFENLKQTFINFLHNLPFYGRAVMCVDDPVIRELLPRVGRQTTTYGFSDDADVRVEDYQQIGPQGHFTLLRQGMPDLRVTLNAPGRHNALNATAAVAVATEEGIDDDAILRALESFQGTGRRFDFLGEFPLEPVNGKSGTAMLVDDYGHHPTEVDATIKAARAGWPDKNLVMLFQPHRYTRTRDLYDDFANVLTQVDALLMLDVYPAGETPIPGADSRSLCRTIRNRGKIDPILVSDPAQIATILAPVLTGNDLILVQGAGNVGKIARYLSEIKLKPQTQEEEQHG

Annotated regions:
phrase: IAGTHGKTTTTAMVSSIYAEAGLDPTFVNGGLVKAAGVHARLGHSRYLIAEADESDASFLHLQPMVAIVTNIEADHMDTYHGDFENLKQTFINFLHNLPFYGRAVMCVDDPVIRELLPRVGRQTTTYGFSDDADVRVEDYQQIGPQGHFTLLRQGMPDLRVTLNAPGRHNALNATAAVAV
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: HIHFVGIGGAGMGGIAEVLANEGYQISGSDLAPNPVTQQLTSLGATIFFNHRPENVRDASVVVVSSAISADNPEIVAAHEARIPVIRRAEMLAELMRF
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: EPVNGKSGTAMLVDDYGHHPTEVDATIKAARAGWPDKNLVMLFQPHRYTRTRDLYDDFANVLTQVDALLMLDVYPAGETPIPGADSRSLCRTIRNRGKIDPILVSDPAQIATILAPVLTGNDLILVQGA
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MLINSPYIVAMTGGIGSGKSTIAKIFSELKVPIIESDIISKKIMFSEKSILNSIKNKLGINFSLNNNKYSKLVLRECIFESKSSVLFINKILHPVVKKKIKKIISNVNFPYIIWVTSLLIEENLYKYVNRILVIDVDPEIQIKRSILRDNVSKNQILNIINFQISREKRLTFAHDIINNYDYSCIRRKVFELHKYYLFKSKKYFKYDM

Annotated regions:
Protein sequence:
MAPRRERVSTLPRLQLLVLLLLPLMLVPQPIAGHGGKYSREKNEPEMAAKRESGEEFRMEKLNQLWEKAKRLHLSPVRLAELHSDLKIQERDELNWKKLKVEGLDKDGEKEAKLIHNLNVILARYGLDGRKDAQMVHSNALNEDTQDELGDPRLEKLWHKAKTSGKFSSEELDKLWREFLHYKEKIQEYNVLLDTLSRAEEGYENLLSPSDMAHIKSDTLISKHSELKDRLRSINQGLDRLRKVSHQGYGSTTEFEEPRVIDLWDLAQSANFTEKELESFREELKHFEAKIEKHNHYQKQLEISHQKLKHVESIGDPEHISRNKEKYVLLEEKTKELGYKVKKHLQDLSSRVSRARHNEL

Annotated regions:
phrase: LLPLMLVPQPIAGHGGKYSREKNEPEMAAKRESGEEFRMEKLNQLWEKAKRLHLSPVRLAELHSDLKIQERDELNWKKLKVEGLDKDGEKEAKLIHNLNVILARYGLDGRKD
type: DOMAIN
name: MG_RAP_rcpt_1
description: Alpha-2-macroglobulin receptor-associated protein, domain 1

phrase: LGDPRLEKLWHKAKTSGKFSSEELDKLWREFLHYKEKIQEYNVLLDTLSRAEEGYENLLSPSDMAHIKSDTLISKHSELKDRLRSINQGLDRLRKVS
type: DOMAIN
name: RAP_D2
description: Alpha-2-macroglobulin RAP, domain 2

phrase: FEEPRVIDLWDLAQSANFTEKELESFREELKHFEAKIEKHNHYQKQLEISHQKLKHVESIGDPEHISRNKEKYVLLEEKTKELGYKVKKHLQDLSSRVSRARHNE
type: DOMAIN
name: RAP_D3
description: Alpha-2-macroglobulin RAP, domain 3

phrase: LGDPRLEKLWHKAKTSGKFSSEELDKLWREFLHYKEKIQEYNVLLDTLSRAEEGYENLLSPSDMAHIKSDTLISKHSELKDRLRSINQGLDRLRKVSHQGYGSTTEFEEPRVIDLWDLAQSANFTEKELESFREELKHFEAKIEKHNHYQKQLEISHQKLKHVESIGDPEHISRNKEKYVLLEEKTKELGYKVKKHLQDLSSRVSRARHNE
type: DOMAIN
name: Alpha_2_MRAP_C
description: Alpha-2-macroglobulin RAP, C-terminal

phrase: FRMEKLNQLWEKAKRLHLSPVRLAELHSDLKIQERDELNWKKLKVEGLDKDGEKEAKLIHNLNVILARYG
type: DOMAIN
name: MG_RAP_rcpt_1
description: Alpha-2-macroglobulin receptor-associated protein, domain 1
Protein sequence:
MRTLWIMAVLLVGVEGHLMQFENMIKKVTGRSGIWWYGSYGCYCGKGGQGLPQDASDRCCFVHDCCYGKVNGCDPKDDFYVYSSENRDIVCGEDNPCTKEICECDKAAAICFRDNMDTYQNKYWFYPSSNCNEESEPC

Annotated regions:
phrase: CCFVHDC
type: ACTIVE_SITE
name: PLipase_A2_His_AS
description: Phospholipase A2, histidine active site

phrase: ICECDKAAAI
type: ACTIVE_SITE
name: PLipase_A2_Asp_AS
description: Phospholipase A2, aspartic acid active site

phrase: HLMQFENMIKKVTGRSGIWWYGSYGCYCGKGGQGLPQDASDRCCFVHDCCYGKVNGCDPKDDFYVYSSENRDIVCGEDNPCTKEICECDKAAAICFRDNMDTYQNKYWFYPSSNC
type: DOMAIN
name: PLipase_A2_dom
description: Phospholipase A2 domain

phrase: LMQFENMIKKVTGRSGIWWYGSYGCYCGKGGQGLPQDASDRCCFVHDCCYGKVNGCDPKDDFYVYSSENRDIVCGEDNPCTKEICECDKAAAICFRDNMDTYQNK
type: DOMAIN
name: PLipase_A2_dom
description: Phospholipase A2 domain

phrase: LMQFENMIKKVTGRSGIWWYGSYGCYCGKGGQGLPQDASDRCCFVHDCCYGKVNGCDPKDDFYVYSSENRDIVCGEDNPCTKEICECDKAAAICFRDNMDTYQNKYWFYPSSN
type: DOMAIN
name: PLipase_A2_dom
description: Phospholipase A2 domain
Protein sequence:
MKNIYNYTLKDLGDLMIGLGQKQFRANQLYSWIYQKRVKEFDEMSDVSLSFRQTLKQEFTLKLPKIIKKQVSYDGTIKLLLELEDKSVIEVVLMRYDYGNVVCVSSQVGCNMGCKFCASGLIKKQRDLTAGEMVSQVMMIQSLLDEEEESKRVSHVVIMGSGEPFDNYNNVMNFIRIINEQKGLAIGARHITVSTCGLPNKIVEFSKEGLQVNLAISLHASNDETRNKIMPINKAYPLTKLFKAINEYEKNANRRVTIEYILLKDLNDSIDNARELVKLLKGTFAYVNLIPYNEVKENPFKRSNKERVRAFYEELKRNGVNVTIRKEFGEDIDAACGQLRAKKEGVIDE

Annotated regions:
phrase: YDYGNVVCVSSQVGCNMGCKFCASGLIKKQRDLTAGEMVSQVMMIQSLLDEEEESKRVSHVVIMGSGEPFDNYNNVMNFIRIINEQKGLAIGARHITVSTCGLPNKIVEFSKEGLQVNLAISLHASNDETRNKIMPINKAYPLTKLFKAINEYEKNANRRVTIEYILLKDLNDSIDNARELVKLLKGTFAYVNLIPYNEVKENPFKRSNKERVRAFYEELKRNGVNVTIRKEFGE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SSQVGCNMGCKFCASGLIKKQRDLTAGEMVSQVMMIQSLLDEEEESKRVSHVVIMGSGEPFDNYNNVMNFIRIINEQKGLAIGARHITVSTCGLPNKIVEFSKEGLQVNLAISLHASNDETRNKIMPINKAYPLTKLFKAINEYEKNANRRVTIEYILLKDLNDSIDN
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: NIYNYTLKDLGDLMIGLGQKQFRANQLYSWIYQKRVKEFDEMSDVSLSFRQTLKQE
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: NVVCVSSQVGCNMGCKFCASGLIKKQRDLTAGEMVSQVMMIQSLLDEEEESKRVSHVVIMGSGEPFDNYNNVMNFIRIINEQKGLAIGARHITVSTCGLPNKIVEFSKEGLQVNLAISLHASNDETRNKIMPINKAYPLTKLFKAINEYEKNANRRVTIEYILLKDLNDSIDNARELVKLLKGTFAYVNLIPYNEVKENPFKRSNKERVRAFYE
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain
Protein sequence:
MCSISFLVLVSISFSMFLLSLNFMLNEYCVFLEWEVVSLNSSGIVMTFLFDWMSLLFMSFVLLISSLVIYYSKEYINSSY

Annotated regions:
phrase: SLNSSGIVMTFLFDWMSLLFMSFVLLISSLVIYYSKEYI
type: DOMAIN
name: Proton_antipo_N
description: NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal
Protein sequence:
MTTKTRFAPSPTGFLHVGGARTALYSWLQARANNGEFVLRIEDTDIERSTQAACDAILEGMNWLGLTWDEGPYYQTKRFDRYNEIIAQMLEKGTAYKCYCSRERIDALRESQAANGEAQKYDGCCRDLPARDTDEPFVVRFKNPIGGSVVFDDHVRGRIEFSNDALDDLIIARTDGVPTYNFCVVVDDWDMGITCVVRGEDHINNTPRQINILKALGAPIPEYAHVSMILGDDGAKLSKRHGAVSVMQYRDDGYLPEALLNYLVRLGWSHGDQEVFSLEEMKQYFKLDDINKAPSAFNTDKLVWLNQHYIKTLDPEYVATHLQWHMDDQKIDTSNGPALAEVVTALAERAKTLKELAASSRYFYEDFADFDAEQAKKHLRGVALEPLQLVQQKLAALTEWTVEAIHQAIEQTATELDVGMGKVGMPLRVSVTGAGQSPGLDITLFLIGRSRSEQRISKAIEFVADRINS

Annotated regions:
phrase: KTRFAPSPTGFLHVGGARTALYSWLQARANNGEFVLRIEDTDIERSTQAACDAILEGMNWLGLTWDEGPYYQTKRFDRYNEIIAQMLEKGTAYKCYCSRERIDALRESQAANGEAQKYDGCCRDLPARDTDEPFVVRFKNPIGGSVVFDDHVRGRIEFSNDALDDLIIARTDGVPTYNFCVVVDDWDMGITCVVRGEDHINNTPRQINILKALGAPIPEYAHVSMILGDDGAKLSKRHGAVSVMQYRDDGYLPEALLNYLVRLGWSHGDQEVFSLEEMKQYFKLDDINKAPSAFNTDKLV
type: DOMAIN
name: Glu/Gln-tRNA-synth_Ib_cat-dom
description: Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain

phrase: TTKTRFAPSPTGFLHVGGARTALYSWLQARANNGEFVLRIEDTDIERSTQAACDAILEGMNWLGLTWDEGPYYQTKRFDRYNEIIAQMLEKGTAYKCYCSRERIDALRESQAANGEAQKYDGCCRDLPARDTDEPFVVRFKNPIGGSVVFDDHVRGRIEFSNDALDDLIIARTDGVPTYNFCVVVDDWDMGITCVVRGEDHINNTPRQINILKALGAPIPEYAHVSMILGDDGAKLSKRHGAVSVMQYRDDGYLPEALLNYLVRLGWSHGDQEVFSLEEMKQYFKLDDINKAPSAFNTDKLVWLNQHYIK
type: DOMAIN
name: GluRS_core
description: Glutamyl-tRNA synthetase

phrase: PSPTGFLHVGG
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: HLQWHMDDQKIDTSNGPALAEVVTALAERAKTLKELAASSRYFYEDFADFDAEQAKKHLRGVALEPLQLVQQKLAALTEWTVEAIHQAIEQTATELDVGMGKVGMPLRVSVTGAGQSPGLDITLFLIGRSRSEQRISKA
type: DOMAIN
name: aa-tRNA-synth_I_cd-bd
description: Aminoacyl-tRNA synthetase, class I, anticodon-binding
Protein sequence:
MAEKLKVELVTPYKRVLSEEVDEITATGALGEFGVLPGHAPFLTSLKIGELAYKKDGVQQHMALNWGYFEVEGDKVTVLVETAERADEIDLERAKAALGRAEEALKKLSPEDKSFRIYEAALERAAIRMQVAAKAARK

Annotated regions:
phrase: DEIDLERAKAALGRAEEALKKLSPEDKSFRIYEAALERAAIRMQV
type: DOMAIN
name: ATP_synth_F1_esu_C
description: ATP synthase epsilon subunit, C-terminal domain

phrase: LKVELVTPYKRVLSEEVDEITATGALGEFGVLPGHAPFLTSLKIGELAYKKDGVQQHMALNWGYFEVEGDKVTVLVET
type: DOMAIN
name: ATP_synth_F1_dsu/esu_N
description: ATP synthase, F1 complex, delta/epsilon subunit, N-terminal
Protein sequence:
MKELQTVLKNHFAIEFTDKKLLETAFTHTSYANEHRLLKISHNERLEFLGDAVLQLLISEYLYKKYPKKPEGDLSKLRAMIVREESLAGFARDCQFDQFIKLGKGEEKSGGRNRDTILGDAFEAFLGALLLDKDVAKVKEFIYQVMIPKVEAGEFEMITDYKTHLQELLQVNGDVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGRSKKLAEQEAAKNAVEKGLDSCI

Annotated regions:
phrase: ERLEFLGD
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: DYKTHLQELLQVNGDVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGRSKKLAEQEAAKNAVEKGL
type: DOMAIN
name: dsRBD_dom
description: Double-stranded RNA-binding domain

phrase: YKTHLQELLQVNGDVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGRSKKLAEQEAAKNAVE
type: DOMAIN
name: dsRBD_dom
description: Double-stranded RNA-binding domain

phrase: KLLETAFTHTSYANEHRLLKISHNERLEFLGDAVLQLLISEYLYKKYPKKPEGDLSKLRAMIVREESLAGFARDCQFDQFIKLGKGEEKSGGRNRDTILGDAFEAFLGALLLDKDVAKVKEFIYQVMIPKVEAGE
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: QTVLKNHFAIEFTDKKLLETAFTHTSYANEHRLLKISHNERLEFLGDAVLQLLISEYLYKKYPKKPEGDLSKLRAMIVREESLAGFARDCQFDQFIKLGKGEEKSGGRNRDTILGDAFEAFLGALLLDK
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: YKTHLQELLQVNGDVAIRYQVISETGPAHDKVFDVEVLVEGKSIGQGQGRSKKLAEQEAAKNAVEKG
type: DOMAIN
name: dsRBD_dom
description: Double-stranded RNA-binding domain

phrase: DKKLLETAFTHTSYANEHRLLKISHNERLEFLGDAVLQLLISEYLYKKYPKKPEGDLSKLRAMIVREESLAGFARDCQFDQFIKLGKGEEKSGGRNRDTILGDAFEAFLGALLLDKDVAKVKEFIYQVMIP
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain

phrase: KLLETAFTHTSYANEHRLLKISHNERLEFLGDAVLQLLISEYLYKKYPKKPEGDLSKLRAMIVREESLAGFARDCQFDQFIKLGKGEEKSGGRNRDTILGDAFEAFLGALLLDKDVAKVKEFIYQVMIPKV
type: DOMAIN
name: RNase_III_dom
description: Ribonuclease III domain
Protein sequence:
MTVEQREASRLGPLFDSCRAENRAALIGYLPTGYPDVNTSVRAMTELVESGCDIVEVGVPYSDPGMDGPTIQRATEAALSGGVRVRDALTAVESISKAGGRAVVMTYWNPVLRYGVDAFARDLAAAGGHGLITPDLIPDEAQQWLAASDEHGLDRIFLVAPSSTPERLANTVAASRGFVYAASTMGVTGARDAVSNAAPDLVARVKAVSDIPVGVGLGVRSREQAAEIGRYADGVIVGSALVSALGDGLPSLRSLTEELAAGVRQRNSP

Annotated regions:
phrase: VEVGVPYSDPGMD
type: ACTIVE_SITE
name: Trp_synthase_alpha_AS
description: Tryptophan synthase, alpha chain, active site
Protein sequence:
SKIDDRFPHHHRFRLHFDVKSIPADEKLKAAELQLTRDALSPQVVASRSSANRTRYQVLVYDITRVGVRGQREPSYLLLDTKTVRLNSTDTVSLDVQPAVDRWLASPQRNYGLLVEVRTVRSLKPAPHHHVRLRRSADEAHERWQHKQPLLFTYTDDGRHKARSIRDVSGGEGGGKGGRNKRQPRRPTRRKNHDDTCRRHSLYVDFSDVGWDDWIVAPL

Annotated regions:
phrase: DDRFPHHHRFRLHFDVKSIPADEKLKAAELQLTRDALSPQVVASRSSANRTRYQVLVYDITRVGVRGQREPSYLLLDTKTVRLNSTDTVSLDVQPAVDRWLASPQRNYGLLVEVRTVRSLKPAPHHHVRLRRSADEAHERWQHKQPLLFT
type: DOMAIN
name: TGF-b_propeptide
description: TGF-beta, propeptide

phrase: RNKRQPRRPTRRKNHDDTCRRHSLYVDFSDVGWDDWIVAP
type: DOMAIN
name: TGF-b_C
description: Transforming growth factor-beta, C-terminal
Protein sequence:
MPDNPTGTLPEIILASASPRRRQILSEMGFIFSVCPSQAELYPDGSVAPAEFAVLNAQIKARDIASKYSNGLIIAADTIVVDDFGILGKPSSKKVALNYLSRLGGKPHTVISSVCLLNTENGQIRSATCQSTLTMRPYTQAEAQRYVDSGLPMDKAGAYGIQDKEFNPVENIQGCYLNVVGLPACTLVRLINEMGFNPKLARNWKPEGDCTLCRIYRTEISRLR

Annotated regions:
Protein sequence:
MGYAHPEVLVSTDWVQEHLEDPKVRVLEVDEDILLYDTGHIPGAQKIDWQRDFWDPVVRDFISEEEFAKLMERLGISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGRPLTTEVPSYPPGRYEVPYRDESIRAYRDDVLEHIIKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPDGTFKSAEELRALYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVGVPIAKGEE

Annotated regions:
phrase: VSTDWVQEHLEDPKVRVLEVDEDILLYDTGHIPGAQKIDWQRDFWDPVVRDFISEEEFAKLMERLGISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGR
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain

phrase: DDVLEHIIKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPDGTFKSAEELRALYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVG
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain

phrase: KEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPDGTFKSAEELRALYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVGVPI
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain

phrase: YDTGHIPGAQK
type: CONSERVED_SITE
name: Thiosulphate_STrfase_CS
description: Thiosulphate sulfurtransferase, conserved site

phrase: EDPKVRVLEVDEDILLYDTGHIPGAQKIDWQRDFWDPVVRDFISEEEFAKLMERLGISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGRPLT
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain

phrase: VKNYDGSWTE
type: CONSERVED_SITE
name: Thiosulphate_STrfase_CS
description: Thiosulphate sulfurtransferase, conserved site

phrase: STDWVQEHLEDPKVRVLEVDEDILLYDTGHIPGAQKIDWQRDFWDPVVRDFISEEEFAKLMERLGISNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWV
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain

phrase: KEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAKNIPWAKAVNPDGTFKSAEELRALYEPLGITKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEW
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain
Protein sequence:
MLKKQTVWLLTMLSLVVVLSVYYIMSPESKNAVQMQSEKSASDSGEVATEKAPAKQDTKEKSGTETEKGKEDGTKGTKDSSADKETSAEASEKGTVVTETADDDLFTTYRLDLEDARSKEREELNAIVSSDDATAKEKSEAYDKMTALSEVEGTEKQLETLIKTQGYEDALVNAEGDKINITVKSDKHSKSKATAIIDLVAKEIKTMKDVAVTFEPSK

Annotated regions:
Protein sequence:
MAIDLVGQKIGMTRLISDDGSIMPVSVIKIEPNRIVQTRTIDIDGYRAIQVTTGKKVNKKGEAKVRRISAAIKGHYAKASQEIGLGLWEFKLEDNEITNATSIDISLFGAGHYVDVIGKSKGKGFQGGVKLHNFQMQDATHGNSISHRAIGSTGQCQEPGRVFKGKKMAGHMGNKQVTQECLKVVKVDIEKSVILVKGSIPGAIKGFVKVSLSPKKDNSNKEVSKNIKNQVTNEVDQTKQM

Annotated regions:
Protein sequence:
MSIEQDILNLLAVKNIISSDELNCKSTDIHGVLLSLSSKKVVDYTIIPIVERVLTPQGRQVEKEGSQEYNLITMLMKSNLSIDNIDKTTLKYAFKNKWIKMENNQIVLSGTTIQDITQKLLRNLDSISKDEFEELKKRKLVDINKKNIYKITRGENFNIEQKDIINELTTQNLFNISDTSLLKKYNFNLSKVSRFFGSLHPLTKIKSEFKRIFLEMGFSEMNTGKYVESSFWNFDSLFQPQNHPSREIQDTFFLKVPRLNDLNDVDSQYINRVESIHSSTSIPVDEGYDKCYSKGHNNVWSVAEAKKNILRTHTTAISSQMLYKLAQSNLKAEIKNYNIKLFSIDKVFRNETVDATHLAEFHQVEGLISGENLGIKELIHTIKTFFTKLNIHQIRFKPAFNPYTEPSMEIFGYHPQLKKWIELGNSGIFRPEMLLPMGFPKNVVVIAWGLSLERPAMIKLGLKNIRDLVGHKISVEFIRDSPVIFMNK

Annotated regions:
phrase: TKIKSEFKRIFLEMGFSEMNTGKYVESSFWNFDSLFQPQNHPSREIQDTFFLKVPRLNDLNDVDSQYINRVESIHSSTSIPVDEGYDKCYSKGHNNVWSVAEAKKNILRTHTTAISSQMLYKLAQSNLKAEIKNYNIKLFSIDKVFRNETVDATHLAEFHQVEGLISGENLGIKELIHTIKTFFTKLNIHQIRFKPAFNPYTEPSMEIFGYHPQLKKWIELGNSGIFRPEMLLPMGFPKNVVVIAWGLSLERPAMIKLGLKNIRDLVGHKISVEFIRDS
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: KYNFNLSKVSRFFGSLHPLTKIKSEFKRIFLEMGFSEMNTGKYVESSFWNFDSLFQPQNHPSREIQDTFFLKVPRLNDLNDVDSQYINRVESIHSSTSIPVDEGYDKCYSKGHNNVWSVAEAKKNILRTHTTAISSQMLYKLAQSNLKAEIKNYNIKLFSIDKVFRNETVDATHLAEFHQVEGLISGENLGIKELIHTIKTFFTKLNIHQIRFKPAFNPYTEPSMEIFGYHPQLKKWIELGNSGIFRPEMLLPMGFPKNVVVIAWGLSLERPAMIKLGLKNIRDLVGHKI
type: DOMAIN
name: Phenylalanyl-tRNA_Synthase
description: Phenylalanyl-tRNA synthetase
Protein sequence:
MDERAALELVGGLVSRAGDDAAVVGDTALTIDMLHDATDFPSGTTRYTAGWRSVGASLSDVAATGATATAAVAAYGAPGFDDDELAAFVTGARDVCTAVGAEYVGGDLDGHSEFTVATAAIGDADHRVTRSGARPGDSVVVTGSLGRSAAAMALFDAGDTERANDLFQFMPRVAAGRVLGAHATAMMDASDGLARSLHQLAAASDCGMAVDSGRLPVADALAEVTADPVERAVSFGGDFELVAAVPPERVEAARAAVPGSLSVVGRVTAAADGVRLDGDALADDGWTH

Annotated regions:
phrase: RPGDSVVVTGSLGRSAAAMALFDAGDTERANDLFQFMPRVAAGRVLGAHATAMMDASDGLARSLHQLAAASDCGMAVDSGRLPVADALAEVTADPVERAVSFGGDFELVAAVPPERVEAARAAVPGSLSVVGRVTAAA
type: DOMAIN
name: PurM-like_C_dom
description: PurM-like, C-terminal domain

phrase: GDDAAVVGDTALTIDMLHDATDFPSGTTRYTAGWRSVGASLSDVAATGATATAAVAAYGAPGFDDDELAAFVTGARDVCTAVGAEYVGGDLDGHSEFTVATAAI
type: DOMAIN
name: PurM-like_N
description: PurM-like, N-terminal domain
Protein sequence:
MSFTSRLKKELFIKAQNLVPQHQLSRVVGKVAASENPILKAAVIHAFKTKYGIDLSIAEQGNALKYKSFNDFFTRALKDGVRLVDENPDSIVSPADGAISQIGKITAGEVFQAKGQSFSVEKLIGDPQLAQPFQEGEFATVYLSPRDYHRVHMPFSGTLTETLYVPGELFSVNQVTAENVPGLFARNERMVCLFDTELGRMAVVLVGAMIVAGIETVATGKVKPSGRIELQHHELKLEKGAELGRFYLGSTAIILFEKDKIEWEKRYKAESVVVMGERMGHTL

Annotated regions:
Protein sequence:
MIPLSIRVPASTANVGPGFDSVGIALSLYLHVVVKEKSDKWQVIHSFEDSIPTDDKNLIVSTACKVCPSLSPHIIEVTSNIPLTRGLGSSASAIVAGIELANQLGKLNLTIDQKVQIATNFEGHPDNVAASILGGTVIGALDGKNVSVVRIESKELGVISLIPNEELNTDESRSVLPDVFPFHEAVKASAISNVLVAALCQKKWKVVGEMMERDHFHEPYRLELVPLLPSIRKCAKEFGAYGTALSGAGPSIFILTPYEKRQEIAEQLARVFTSMKVCELEIDHRGITVNKKEHIGL

Annotated regions:
phrase: IPLTRGLGSSA
type: CONSERVED_SITE
name: GHMP_knse_ATP-bd_CS
description: GHMP kinase, ATP-binding, conserved site

phrase: NLIVSTACKVCPSLSPHIIEVTSNIPLTRGLGSSASAIVAGIELANQLGKLNLTIDQKVQIATNFEGHPDNVAASILG
type: DOMAIN
name: GHMP_kinase_N_dom
description: GHMP kinase N-terminal domain

phrase: VAALCQKKWKVVGEMMERDHFHEPYRLELVPLLPSIRKCAKEFGAYGTALSGAGPSIFILTPYEKRQEIAEQLARV
type: DOMAIN
name: GHMP_kinase_C_dom
description: GHMP kinase, C-terminal domain