nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MDQVTALIVAAGSGTRMGGDTAKQYRPLAGKPLLRHAVEALIGHPRISAVRVVIGQGQEDLASAALAGLDVGAFVIGGAERADSVRAGLEAIGRGVVLVHDAARPFCPPEVVDRLLDALGKADGAVPVLPVADTLAKGDSELRGTVNRTQLLRIQTPQAFHLEDLRYAYDEAGSSAPTDESTVMQHAGLKVATVAGDEILHKLTSPRDWERAEMMLAARMISRSGTGFDVHAFDGPGPLIMGGITIDHPQGLAGHSDADVVLHAITDALLGAAALGDIGQHFPPSDPQWKGAASDRFLRHAADLITGKGGIIDHVDCTVICEAPKVGPHRAAIQARVAEILDLRPEAVSIKATTTEQLGFTGRREGIASSAIATIRLPA

Annotated regions:
phrase: RSGTGFDVHAFDGPGPLIMGGITIDHPQGLAGHSDADVVLHAITDALLGAAALGDIGQHFPPSDPQWKGAASDRFLRHAADLITGKGGIIDHVDCTVICEAPKVGPHRAAIQARVAEILDLRPEAVSIKATTTEQLGFTGRREGIASSAIAT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: RSGTGFDVHAFDGPGPLIMGGITIDHPQGLAGHSDADVVLHAITDALLGAAALGDIGQHFPPSDPQWKGAASDRFLRHAADLITGKGGIIDHVDCTVICEAPKVGPHRAAIQARVAEILDLRPEAVSIKATTTEQLGFTGRREGIASSAIAT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: LTSPRDWERAEMMLAARMISRSGTGFDVHAFDGPGPLIMGGITIDHPQGLAGHSDADVVLHAITDALLGAAALGDIGQHFPPSDPQWKGAASDRFLRHAADLITGKGGIIDHVDCTVICEAPKVGPHRAAIQARVAEILDLRPEAVSIKATTTEQLGFTGRREGIASSAIAT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: SRSGTGFDVHAFDGPGPLIMGGITIDHPQGLAGHSDADVVLHAITDALLGAAALGDIGQHFPPSDPQWKGAASDRFLRHAADLITGKGGIIDHVDCTVICEAPKVGPHRAAIQARVAEILDLRPEAVSIKATTTEQLGFTGRREGIASSAIATIR
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

phrase: SDADVVLHAITDALL
type: CONSERVED_SITE
name: MECDP_synthase_CS
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site

phrase: VLVHDAA
type: CONSERVED_SITE
name: ISPD_synthase_CS
description: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site

phrase: RSGTGFDVHAFDGPGPLIMGGITIDHPQGLAGHSDADVVLHAITDALLGAAALGDIGQHFPPSDPQWKGAASDRFLRHAADLITGKGGIIDHVDCTVICEAPKVGPHRAAIQARVAEILDLRPEAVSIKATTTEQLGFTGRREGIASSAIAT
type: DOMAIN
name: MECDP_synthase
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
Protein sequence:
MEKHKNISMAVIKRLPKYHRYLEELMKNEVDRISSKELGEKIGFTASQIRQDLNCFGDFGQQGYGYNVKELYTQISAILGLDRGYEAALVGAGNIGQAVSNYSRFENLGFKITAIFDANPKLIGMKIRDVEIMDIDEMESVLEEHKIDIGIICVPRKNAQVVADELIRGGVRAIWNFAPVDLVVPDHVKVENVHLSESLLTLIYLLNESES

Annotated regions:
phrase: NISMAVIKRLPKYHRYLEELMKNEVDRISSKELGEKIGFTASQIRQDL
type: DOMAIN
name: Rex_DNA-bd_C_dom
description: Rex DNA-binding, C-terminal domain

phrase: YEAALVGAGNIGQAVSNYSRFENLGFKITAIFDANPKLIGMKIRDVEIMDIDEMESVLEEHKIDIGIICVPRKNAQVVADELIRGGVRAIWNFAP
type: DOMAIN
name: CoA-bd
description: CoA-binding

phrase: GLDRGYEAALVGAGNIGQAVSNYSRFENLGFKITAIFDANPKLIGMKIRDVEIMDIDEMESVLEEHKIDIGIICVPRKNAQVVADELIRGGVRAIWNFAPV
type: DOMAIN
name: CoA-bd
description: CoA-binding
Protein sequence:
MVKDTYISSASKTPPMERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYGVVDEQAAVSAEVEHLSRMKRKLYVAAFAGVLLLFLAHFISLPYEDFVQLLIALPAIFYSGSSIFKAAFSALRRRTLNMDVMYSMGVGAAFLASVLSTAGVLPREYSFYETSVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVVEGESYVDESMISGEPVPVLKSKGDEVFGATINNTGVLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIAHAPLLFAFTTLIAVLVVACPCAFGLATPTALTVGMGKGAELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGDERELLRLAAIAERRSEHPIAEAIVKKALEHGIELGEPEKVEVIAGEGVVADGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVLPHQKSEEVKKLQAKEVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMSSVSVVANSLLLRNYVPPIRRGGDSVEKIVLELSGLSCHHCVARVKKALEEAGAKVEKVDLNEAVVAGNKEDVDKYIKAVEAAGYQAKLRS

Annotated regions:
phrase: MERTVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYGV
type: DOMAIN
name: HMA_dom
description: Heavy metal-associated domain, HMA

phrase: EKIVLELSGLSCHHCVARVKKALEEAGAKVEKVDLNEAVVAGNKEDVDKYIKAVEAAGYQA
type: DOMAIN
name: HMA_dom
description: Heavy metal-associated domain, HMA

phrase: GILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNGDERELLRLAAIAERRSEHPIAEAIVKKALEHGIELGEPEKVEVIAGEGVVADGILVGNKRLMEDFGVAVSNEVELALEKLEREAKTAVIVARNGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLDLVIAEVLPHQKSEEVKKLQAKEVVAFVGDGINDAPALAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRK
type: DOMAIN
name: P_typ_ATPase_HD_dom
description: P-type ATPase, haloacid dehalogenase domain

phrase: DKTGTL
type: PTM
name: ATPase_P-typ_P_site
description: P-type ATPase, phosphorylation site

phrase: TVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYG
type: DOMAIN
name: HMA_Cu_ion-bd
description: Heavy metal-associated domain, copper ion-binding

phrase: VLELSGLSCHHCVARVKKALEEAGAKVEKVDLNEAVVAGNKEDVDKYIKAVEAAGYQA
type: DOMAIN
name: HMA_dom
description: Heavy metal-associated domain, HMA

phrase: TVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLGYG
type: DOMAIN
name: HMA_dom
description: Heavy metal-associated domain, HMA

phrase: LSGLSCHHCVARVKKALEEAGAKVEKVD
type: CONSERVED_SITE
name: Heavy-metal-associated_CS
description: Heavy-metal-associated, conserved site

phrase: TVRVTGMTCAMCVKSIETAVGSLEGVEEVRVNLATETAFIRFDEKRIDFETIKRVIEDLG
type: DOMAIN
name: HMA_dom
description: Heavy metal-associated domain, HMA
Protein sequence:
MLRSEKPVAVEDIVNIYKESPSVIITHYHGLTVSQVSSLREELKSKEAGFKVVKNTLAKIAAKQTGLDSITNLFAGPTAIVYSKEPVEMARLVVNFANSNDNLKIIGGIVDNHILDAYSIKELSKLPSLHELRGKIVGLLQAPATKVVGVLQATSSSIARVIHAHAIKH

Annotated regions:
phrase: KPVAVEDIVNIYKESPSVIITHYHGLTVSQVSSL
type: CONSERVED_SITE
name: Ribosomal_uL10_CS_bac
description: Large ribosomal subunit protein uL10, conserved site, bacteria
Protein sequence:
MSMTDPIADLLVRIKNAAAVGKQTVKAPSSKIKVAIAQVLKDEGYITDLRVTQLENNKSELEIVLKYFEGKPVIATLKRFSRSGLRQYRGKSELPKVMNGLGISIISTSKGIMTDAQARQLGVGGEVLCFVA

Annotated regions:
phrase: GISIISTSKGIMTDAQA
type: CONSERVED_SITE
name: Ribosomal_uS8_CS
description: Small ribosomal subunit protein uS8, conserved site
Protein sequence:
MLKNMFLWLIIAVVLVTVFSNFGPHEPQVSQYTYSEFLQAVKSGDISNVIIQNDIISGNTKDGKHFTTYLPMPDQNLLNDLVKQKVNVRGEPPKERSLLMQILISWAPFLLLIGVWIFFMRQMQGGGKGGPMSFGRSKARLLGMDQVRVTFKDVAGIDEAKHELEEMVEFLKDPAKFQKLGGKMPCGVLLMGPPGTGKTLLAKAVAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKHAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFEGKEGVIVMASTNRPDVLDPALLRPGRFDRQVVVPLPDIKGREAILKVHMQKVPAANDANATLIARGTPGFSGADLANLVNEAALFAAREDKKQVQMTDFEKAKDKIIMGAERRSMVMSDTEKKLTAFHEAGHAVVGLYMKEHDPVYKVTIIPRGRALGVTMFLPEADRYSYSKSRLKCQLAALFGGRVAEELIFGSDAVTTGASNDIEKATEIARNMVTKWGLSDAMGPITYGAEEGEVFLGRTMTQRSEASDETNMKIDLEIRKIIDTAYATAKSVLTEHNDQLHTMAEALIKYETLDDSQIKEIMQGKAPTPPDGWDEASRKPESTDADSKSTGKPLISGTQTEAMASE

Annotated regions:
phrase: VLLMGPPGTGKTLLAKAVAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKHAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFEGKEGVIVMASTNRPDVLDPALLRPGRFDRQVVVP
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: MPCGVLLMGPPGTGKTLLAKAVAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKHAPCIIFIDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFEGKEGVIVMASTNRPDVLDPALLRPGRFDRQVVVPLP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: TLIARGTPGFSGADLANLVNEAALFAAREDKKQVQMTDFE
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: FLWLIIAVVLVTVFSNFGPHEPQVSQYTYSEFLQAVKSGDISNVIIQNDIISGNTKDGKHFTTYLPMPDQNLLNDLVKQKVNVRGEP
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular

phrase: MVMSDTEKKLTAFHEAGHAVVGLYMKEHDPVYKVTIIPRGRALGVTMFLPEADRYSYSKSRLKCQLAALFGGRVAEELIFGSDAVTTGASNDIEKATEIARNMVTKWGLSDAMGPITYGAEEGEVFLGRTMTQRSEASDETNMKIDLEIRKIIDTAYATAKSVLTEHNDQLHTMAEALIKYETLDDSQIKE
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41
Protein sequence:
MTEELFSNSETCSLSDPLTSKTLSSIENPFDDPYILSEESEILTIKTDVLRPNILNRKSSFYPEADAPVRKSNLQVKKIFENQVLNCDGIKVAITIPDTSLIAGSLLHGNIWLSYEGAKNVETGVWIKEMFLDFYGILNFKGHSEPFYSISEKYSFCNLKTSALILSKAASASIGNKGLFLKCSCKVGFPFSFIVPLDIGPGTYHSSKLELLYYISSTLTLTSLDQNIRCTRCTIPKRVITSMHNNIAELYNPISCIKSLPYLSLEEAKTTLEVHTDRSLFFSGQIIDFTICYTHNHHRRIHNIKARLLETHIFHPNTQNHYGGYCMNQAEETFASCGYLKRYQKTKTKTRAKSTWKIANKSVYSNLAPTLKNTIHAQIKIPEFCRSVNLKDQLKIDYTLEVCFSAFFKPRILSIQIPITILHSWN

Annotated regions:
phrase: EEAKTTLEVHTDRSLFFSGQIIDFTICYTHNHHRRIHNIKARLLETHIFHPNTQNHYGGYCMNQAEETFASCGYLKRYQKTKTKTRAKSTWKIANKSVYSNLAPTLKNTIHAQIKIPEFCRSVNLKDQLKIDYTLEVCFSAFFKPRILSIQIPITILHSW
type: DOMAIN
name: Arrestin_C-like
description: Arrestin C-terminal-like domain

phrase: KTTLEVHTDRSLFFSGQIIDFTICYTHNHHRRIHNIKARLLETHIFHPNTQNHYGGYCMNQAEETFASCGYLKRYQKTKTKTRAKSTWKIANKSVYSNLAPTLKNTIHAQIKIPEFCRSVNLKDQLKIDYTLEVCFSAFFKPRILSIQIPITILHS
type: DOMAIN
name: Arrestin_C-like
description: Arrestin C-terminal-like domain
Protein sequence:
MSVSAFNRRWAAVILEALTRHGVRHVCIAPGSRSTPLTLAAAENPAFIHHTHFDERGLGHLALGLAKASKQPVAVIVTSGTAVANLYPALIEAGLTGEKLILLTADRPPELIDCGANQAIRQAGIFASHPSQTLSLPRPTQDIPARWLVSTIDNALAMLHAGALHINCPFAEPLYGDMNDTGLVWQQRLGDWWQDEKPWLREARRRESDKQRDWFFWRQKRGVVVAGRMSAEEGKKVAQWAQTLGWPLIGDVLSQTGQPLPCADLWLGNAKAVTELQQAQIVVQLGSSLTGKRLLQWQATCEPEEYWVIDNIEGRLDPAHHRGRRLVAKIADWLELHPAEKRKPWCVEIPRLAELAWQRVVAQRDTFGEAQLAHRIRDYLPEQGQLFVGNSLVVRLIDALSQLPAGYPVYSNRGASGIDGLLSTAAGVQRASAKSTLAIVGDLSALYDLNALALLRQVSAPFVLIVVNNNGGQIFSLLPTPQSKRERFYLMPQNVHFDHAAAMFNLRYHRPENWEELELALASAWRTPATTLIELVVNETDGAQTLQQLLAQVSHL

Annotated regions:
phrase: LSTAAGVQRASAKSTLAIVGDLSALYDLNALALLRQVSAPFVLIVVNNNGGQIFSLLPTPQSKRERFYLMPQNVHFDHAAAMFNLRYHRPENWEELELALASAWRTPATTLI
type: DOMAIN
name: TPP_enzyme_TPP-bd
description: Thiamine pyrophosphate enzyme, TPP-binding

phrase: WQQRLGDWWQDEKPWLREARRRESDKQRDWFFWRQKRGVVVAGRMSAEEGKKVAQWAQTLGWPLIGDVLSQTGQPLPCADLWLGNAKAVTELQQAQIVVQLGSSLTGKRLLQWQATCEPEEYWVIDNIEGRLDPAHHRGRRLVAKIADWLELHPAEKRKPWCVEIPRLAELAWQRVVAQRDTFGEAQLAHRIRDYLPEQGQLF
type: DOMAIN
name: MenD_middle
description: Menaquinone biosynthesis protein MenD, middle domain

phrase: WAAVILEALTRHGVRHVCIAPGSRSTPLTLAAAENPAFIHHTHFDERGLGHLALGLAKASKQPVAVIVTSGTAVANLYPALIEAGLTGEKLILLTADRPPELIDCGANQA
type: DOMAIN
name: Thiamin_PyroP_enz_TPP-bd_dom
description: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain
Protein sequence:
MAATGGGADDESRSGRSSSDGECAVAPEPLAEAGGLVSFADFGVSLGSGAGLPGRSVGRAQSSLRYLQVLWQQDVEPRDELRCKIPAGRLRRAARPHRRLGPTGKEVHALKRLRDSANANDVETVQQLLEDGADPCAADDKGRTALHFASCNGNDQIVQLLLDHGADPNQQDGLGNTPLHLAACTNHVPVITTLLRGGARVDALDRAGRTPLHLAKSKLNILQEGHSQCLEAVRLEVKQIIHMLREYLERLGRHEQRERLDDLCTRLQMTSTKEQVDEVTDLLASFTSLSLQMQSMEKR

Annotated regions:
phrase: HALKRLRDSANANDVETVQQLLEDGADPC
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: LGNTPLHLAACTNHVPVITTLLRGGARVD
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: AGRTPLHLAKSKLNILQEGHSQCLEAVRLEVKQIIH
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: KGRTALHFASCNGNDQIVQLLLDHGADPN
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: GNTPLHLAACTNHVPVITTLLRGGARVDAL
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: KGRTALHFASCNGNDQIVQLLLDHGADPNQQD
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: ANANDVETVQQLLEDGADPCAADDKGRTALHFASCNGNDQIVQLLLDHGADPNQQ
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: LGNTPLHLAACTNHVPVITTLLRGGARVDALD
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat
Protein sequence:
MRVPSVDRLEDLLVWLRARGATGLCADSRQVRTGDAFVAWPGAAVDARRFVGAALGAGAVAAVVEAEGLEAWLAAHPASTWADAAMEPVRVMAYPGLRAAAGPLASAFWGAPSQALDLIAVTGTNGKTSTAWWTAQGLQAAGVPAGLIGTLGIGRPGAALVSTGLTTPDPITLQRALRRLADEGARAVVLEASSIGIEEGRLDGARVHTAIFTNLTQDHLDYHGTMEAYWAAKRRLFDWPGLRTAVVGVDGPHGQALAAALAARPADGGLDLWTYATTPAPPHARLRLQAREWLPHGARFTVAEGAVHTTFELPVVGDYNLANLLAVMAVLRSRGLSWSAVAHACQGLTPVPGRMQAAWTAADGPADGLPLVLVDYAHTPDAVAQALQALRPLAARRGGRLWCVLGCGGDRDPGKRPLMAAAAEQGADRVVLTSDNPRSEDPRHILAQMQAGLRDPAAAWVEPDRAQAIARAIAAAQACDIVLLAGKGHEDYQEIAGVRRPFSDLEQARAALRRRSGETA

Annotated regions:
phrase: VTGTNGKTSTAWWTAQGLQAAGVPAGLIGTLGIGRPGAALVSTGLTTPDPITLQRALRRLADEGARAVVLEASSIGIEEGRLDGARVHTAIFTNLTQDHLDYHGTMEAYWAAKRRLFDWPGLRTAVVGVDGPHGQALAAALAARPADGGLDLWTYATTPAPPHARLRLQAREWLPHGARFTVAEGAVHTTFELPVVGDYNLANLLAVMA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: DGLPLVLVDYAHTPDAVAQALQALRPLAARRGGRLWCVLGCGGDRDPGKRPLMAAAAEQGADRVVLTSDNPRSEDPRHILAQMQAGLRDPAAAWVEPDRAQAIARAIAAAQACDIVLLAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
METTSEKQGRILLVDDESAILRTFRYCLEDEGYSVATASSAPQAEALLQRQVFDLCFLDLRLGEDNGLDVLAQMRVQAPWMRVVIVTAHSAVDTAVDAMQAGAVDYLVKPCSPDQLRLAAAKQLEVRQLTARLEALEDEVRRQGDGLESHSPAMAAVLETARQVAATDANILILGESGSGKGELARAIHTWSKRAKKPQVTINCPSLTAELMESELFGHSRGAFTGATESTLGRVSQADGGTLFLDEIGDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNRDLGAMVAQGQFREDLLYRLNVIVLNLPPLRERAEDILGLAERFLARFVKDYGRPARGFSEAAREAMRQYPWPGNVRELRNVIERASIICNQELVDVDHLGFSAAQSASSAPRIGESLSLEDLEKAHITAVMASSATLDQAAKTLGIDASTLYRKRKQYGL

Annotated regions:
phrase: WPGNVRELR
type: CONSERVED_SITE
name: Sigma_54_int_dom_CS
description: Sigma-54 interaction domain, conserved site

phrase: GRVSQADGGTLFLDE
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_2
description: Sigma-54 interaction domain, ATP-binding site 2

phrase: ILILGESGSGKGE
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_1
description: Sigma-54 interaction domain, ATP-binding site 1

phrase: SHSPAMAAVLETARQVAATDANILILGESGSGKGELARAIHTWSKRAKKPQVTINCPSLTAELMESELFGHSRGAFTGATESTLGRVSQADGGTLFLDEIGDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNRDLGAMVAQGQFREDLLYRLNVIV
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: SLEDLEKAHITAVMASSATLDQAAKTLGIDASTLYRKRKQ
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: TDANILILGESGSGKGELARAIHTWSKRAKKPQVTINCPSLTAELMESELFGHSRGAFTGATESTLGRVSQADGGTLFLDEIGDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNRDLGAMVAQGQFREDLLYRLNVIVLNLPP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: ILLVDDESAILRTFRYCLEDEGYSVATASSAPQAEALLQRQVFDLCFLDLRLGEDNGLDVLAQMRVQAPWMRVVIVTAHSAVDTAVDAMQAGAVDYLVKPCSPDQLRL
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: LESHSPAMAAVLETARQVAATDANILILGESGSGKGELARAIHTWSKRAKKPQVTINCPSLTAELMESELFGHSRGAFTGATESTLGRVSQADGGTLFLDEIGDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNRDLGAMVAQGQFREDLLYRLNVIVLNLPPLRERAEDILGLAERFLARFVKDYGRPARGFSEAAREAMRQYPWPGNVRELRNVIERAS
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: RILLVDDESAILRTFRYCLEDEGYSVATASSAPQAEALLQRQVFDLCFLDLRLGEDNGLDVLAQMRVQAPWMRVVIVTAHSAVDTAVDAMQAGAVDYLVKPCSPDQLRLAAAKQ
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: GRILLVDDESAILRTFRYCLEDEGYSVATASSAPQAEALLQRQVFDLCFLDLRLGEDNGLDVLAQMRVQAPWMRVVIVTAHSAVDTAVDAMQAGAVDYLVKPCSPDQLRLA
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain
Protein sequence:
MDRKYKVAVVGATGAVGETMLSILAERGFPVGELVALASERSAGGMVAFGDDEVMVRDLAGFDPAGVDIALFSAGGAISKEYAPKFAAAGAVVIDNSSAFRLDPDVPLVVAEVNPEMVKQRPRGIIANPNCSTMQMVVALAPIHRRAGIERINVATYQSVSGAGRLALEELGRQTASLLSFQGAEPERFPVQIAFNLIPHIDEFMDNGYTREEMKLVWETRRILGDERIQVNPTAVRVPVFYGHAEALHIETREKLTAGEARALLEAAPGVEVVDERAPGGYPTPVTHASGRDAVFVGRIREDLSHPRGLDLWVVADNIRKGAALNAVQIAELVAGEG

Annotated regions:
phrase: KVAVVGATGAVGETMLSILAERGFPVGELVALASERSAGGMVAFGDDEVMVRDLAGFDPAGVDIALFSAGGAISKEYAPKFAAAGAVVIDNSSAFRLDPDVPLVVAEVNPEMVK
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: KVAVVGATGAVGETMLSILAERGFPVGELVALASERSAGGMVAFGDDEVMVRDLAGFDPAGVDIALFSAGGAISKEYAPKFAAAGAVVIDNSSAFRLDPDVPLVVAEVNPEMVKQ
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: LAPIHRRAGIERINVATYQSVSGAGRLALEELGRQTASLLSFQGAEPERFPVQIAFNLIPHIDEFMDNGYTREEMKLVWETRRILGDERIQVNPTAVRVPVFYGHAEALHIETREKLTAGEARALLEAAPGVEVVDERAPGGYPTPVTHASGRDAVFVGRIREDLSHPRGLDLWVVADNIR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain
Protein sequence:
MRPNDRAVDQIRPIKITRNYTAYAEGSVLVEFGNTKVLCNATVEENVPRWLKGQGKGWVTAEYGMLPRATHTRNRREAASGKQGGRTMEIQRLIARSLRAVVDLKVMGEIMITVDCDVIQADGGTRTASISGASVAMADAINSLLASGKLKKNPMKGHVAAVSVGIVGAQALCDLEYVEDSAADTDMNVVMTEDGKMIEIQGTAEGEPFSHEELMQLLALANKGIADIVEAQKAALAD

Annotated regions:
phrase: QIRPIKITRNYTAYAEGSVLVEFGNTKVLCNATVEENVPRWLKGQGKGWVTAEYGMLPRATHTRNRREAASGKQGGRTMEIQRLIARSLRAVVDLKVMGEIMITVDCDVIQADGGTRTASISGASVAMAD
type: DOMAIN
name: ExoRNase_PH_dom1
description: Exoribonuclease, phosphorolytic domain 1

phrase: CDVIQADGGTRT
type: CONSERVED_SITE
name: RNase_PH_CS
description: Ribonuclease PH, conserved site

phrase: VAAVSVGIVGAQALCDLEYVEDSAADTDMNVVMTEDGKMIEIQGTAEGEPFSHEELMQLLALAN
type: DOMAIN
name: ExoRNase_PH_dom2
description: Exoribonuclease, phosphorolytic domain 2
Protein sequence:
MEDHYGYMSIKNMPMSERPREKLLSFGSQSLSNAELLAIILSTGTKDRTAIDLARSILNTSTEGLRGLKDCTIEELSQVKGVGLAKASQIIAAVELGKRISLTTKVNNYKIKGPDDVSNLLMEEMRYLNKEIFNILLLTTKHDIIAIENISVGSLNASIVHPREVFNRAIKRSSSAIILAHNHPSGDPNPSGEDINITKRLIEAGNIIGISVLDHIIIGDGVYFSMKEHKLI

Annotated regions:
phrase: DDVSNLLMEEMRYLNKEIFNILLLTTKHDIIAIENISVGSLNASIVHPREVFNRAIKRSSSAIILAHNHPSGDPNPSGEDINITKRLIEAGNIIGISVLDHIIIGDGVYFSM
type: DOMAIN
name: RadC_JAB
description: RadC-like JAB domain

phrase: KGPDDVSNLLMEEMRYLNKEIFNILLLTTKHDIIAIENISVGSLNASIVHPREVFNRAIKRSSSAIILAHNHPSGDPNPSGEDINITKRLIEAGNIIGISVLDHIIIGDGVYFSMKEH
type: DOMAIN
name: RadC_JAB
description: RadC-like JAB domain

phrase: KIKGPDDVSNLLMEEMRYLNKEIFNILLLTTKHDIIAIENISVGSLNASIVHPREVFNRAIKRSSSAIILAHNHPSGDPNPSGEDINITKRLIEAGNIIGISVLDHIIIGDGVYFSMKEHKL
type: DOMAIN
name: MPN
description: MPN domain

phrase: HNHPS
type: CONSERVED_SITE
name: UPF0758_CS
description: Uncharacterised protein family UPF0758, conserved site

phrase: IKNMPMSERPREKLLSFGSQSLSNAELLAIILSTGTKDRTAIDLARSILNTSTEGLRGLKDCTIEELSQVKGVGLAK
type: DOMAIN
name: UPF0758_N
description: UPF0758, N-terminal
Protein sequence:
MRVTSSRLLQGGSLVSRVLKRRLNNASRTKKGWFSTRTLADSNEHLRRVFDDQAYFDNFTKSGAPEGAMNSLFGGNGVGLFRNRALISPQGLVDFSEESLERAKMLVSNMMAEVKTSEQGRLEYIKKLDQLSDVLCRVIDVAEFIRVSHPSQKWVDAAQRTHEIMFEYMNQLNTNVELYESLRDLLIDPAITTKLSKEEIEVGEYLRQDFERSGIHMDPNTRNNFVAITQEISLLGSHFNNDIHSLESYWCNISRSEFDKISDTVVKSEIYGYQSSSPASQNKDSGNIYIPLAGHIPYTILSKCEVESVRRKVWISLHNSPKEQIDTLNAFVKYRALLAKMLGYKSFAHYQLEHKMAKNPENVLTLLRNLQQGLISKEYGVCEEVKKLHSFKNGDDAVMTDEEILEDVKPWDREYLLAQLQSQTLKDEEPLEDISEYFSVGTIVSGLSKLFYSIYNVNLIPEATLKGETWDSNQVRKLNVFDVTSNKKLGYLYLDFWSPKVLPSHFTIVCSRKLNTDIGSESRDEMREMVQLDENEQHQLPVISLVCNLSKPQGTGVGRFTGMDSRKPTLLSLDQVDTIFHEMGHAMHSMIGKTDLHNLSGTRCVTDFVELPSVLMESFSKDPRVLCKIAKHYRTKEPLSKETLAKHQSHRVLLEESETFMQSKMAMLDQVLHNEDIINCGIKDFDSTAVYHHLESQLKVFADKWSTWHGKFPHLFSYGAVYYSYLLDRAIAEKIWHGLFKDDPWSREAGQKYKDSILKWGGTRDPWV

Annotated regions:
phrase: LSKCEVESVRRKVWISLHNSPKEQIDTLNAFVKYRALLAKMLGYKSFAHYQLEHKMAKNPENVLTLLRNLQQGLISKEYGVCEEVKKLHSFKNGDDAVMTDEEILEDVKPWDREYLLAQLQSQTLKDEEPLEDISEYFSVGTIVSGLSKLFYSIYNVNLIPEATLKGETWDSNQVRKLNVFDVTSNKKLGYLYLDFWSPKVLPSHFTIVCSRKLNTDIGSESRDEMREMVQLDENEQHQLPVISLVCNLSKPQGTGVGRFTGMDSRKPTLLSLDQVDTIFHEMGHAMHSMIGKTDLHNLSGTRCVTDFVELPSVLMESFSKDPRVLCKIAKHYRTKEPLSKETLAKHQSHRVLLEESETFMQSKMAMLDQVLHNEDIINCGIKDFDSTAVYHHLESQLKVFADKWSTWHGKFPHLFSYGAVYYSYLLDRAIAEKIWHGLFKDDPWSREAGQKYKDSILKWGGTRDP
type: DOMAIN
name: Pept_M3A_M3B_dom
description: Peptidase M3A/M3B catalytic domain
Protein sequence:
MIIVISPAKSQNFEPIKTAYQFTQPIFKQQIIKLINTLKHYEVEEIEKLMKISPKLAEEVFAKHNSFNPNKYDNSNAKAAIFTFSGDVYKGLEADTLDNKTIEYAQNHLLMLSGLYGLVRPLDLIQAYRLEMGTNIKIDGKILHKYWQDKITTQLNEYFSQQQNKILINLASNEYSQAIDKKSLAVKWLDIDFKENKAGAYKTIGIHAKKARGLMTRYILENRIENVSDIKKFNVAGYQFNPDFSDENLLCFTR

Annotated regions:
Protein sequence:
MITGIQITKANNEALLNSFWLLDDEKAELRCVCAKSGYAEDQIVPTSELGEIEYREVPLEVQPTVRVEGGQHLNVNVLSRDTLEDAVKNPEKYPQLTIRVSGYAVRFNSLTPEQQRDVITRTFTESL

Annotated regions:
phrase: TIRVSGYA
type: CONSERVED_SITE
name: Form_AcTrfase_GR_CS
description: Formate C-acetyltransferase glycine radical, conserved site

phrase: IQITKANNEALLNSFWLLDDEKAELRCVCAKSGYAEDQIVPTSELGEIEYREVPLEVQPTVRVEGGQHLNVNVLSRDTLEDAVKNPEKYPQLTIRVSGYAVRFNSLTPEQQRDVITRTFTES
type: DOMAIN
name: Gly_radical
description: Glycine radical domain

phrase: ALLNSFWLLDDEKAELRCVCAKSGYAEDQIVPTSELGEIEYREVPLEVQPTVRVEGGQHLNVNVLSRDTLEDAVKNPEKYPQLTIRVSGYAVRF
type: DOMAIN
name: Gly_radical
description: Glycine radical domain
Protein sequence:
MAKKALISVSKKEGIVEFAKKLNELGYEIISTGGTYNLLKENRVNVVKVSDITGFPEIMDGRVKTLHPKIHGGLLAIRDNEEHIKALKEHGIEPIDIVVINLYPFKETILKENVTLEEAIENIDIGGPSMIRAAAKNYKYVTILVDPKDYDTVIEEIKQYGNTKEETRFYLAAKAFGHTALYDSLIYNYLIQKNNIEFPEVMAFAYEKAQDMRYGENPHQKAAFYKNPIKAYGIAECEQLHGKELSFNNINDANAAIELLREFKEPAAVAVKHTNPCGVAIADNIYNAYLKAYESDPVSIFGGIVALNRTVDVKTAEELIKIFLEIVIAPDFEEEAFEILKKKKNLRILRLKEGYEKEYDLKKVEGGLLVQEKDEIDLDENNLKVVTKKAPTQKEMEDLRFAWKVVKHVKSNAIVLAKDGATVGIGVGQVNRIWPTEQAIKQAGSKAKGSVLASDAFFPFPDVVEVASKAGITAIIQPGGSQNDALSIEAADKGGVSMIFTGIRHFKH

Annotated regions:
phrase: GIVEFAKKLNELGYEIISTGGTYNLLKENRVNVVKVSDITGFPEIMDGRVKTLHPKIHGGLLAIRDNEEHIKALKEHGIEPIDIVVINLYPFKETILKENVTLEEAIENIDIGG
type: DOMAIN
name: MGS-like_dom
description: Methylglyoxal synthase-like domain

phrase: MAKKALISVSKKEGIVEFAKKLNELGYEIISTGGTYNLLKENRVNVVKVSDITGFPEIMDGRVKTLHPKIHGGLLAIRDNEEHIKALKEHGIEPIDIVVINLYPFKETILKENVTLEEAIENIDIGGPSMIRAAAKNYKYVTIL
type: DOMAIN
name: MGS-like_dom
description: Methylglyoxal synthase-like domain

phrase: GIVEFAKKLNELGYEIISTGGTYNLLKENRVNVVKVSDITGFPEIMDGRVKTLHPKIHGGLLAIRDNEEHIKALKEHGIEPIDIVVINLYPFKETILKENVTLEEAIENIDIGGP
type: DOMAIN
name: MGS-like_dom
description: Methylglyoxal synthase-like domain
Protein sequence:
MKMSNMLVGTLREVPAEAEIESHKLMLRAGLMRKMAAGIYNYMPLGLKVIENVKNIVREEMNNAGAQEFLASALIPAELWQESGRWDAYGAEMFRLKDRHNRDFCLGPTHEEVFTDIVRNEIKSYKQLPLNLYQIQTKYRDERRPRFGVMRSREFIMKDGYSFDKDQEGLDLAYEKMRKAYVNIFNRCGLDAKAVAADSGAIGGSGSAEFMVKSEVGEDDVVFCTACDYAANIEKAPSTPEHGEKEELMEVEKVETPAVKSIEDLAKFFECSPKKIAKTLIFQADDKVVAVVLRGDREANEVKIANAIGEVIELEMASEEAVKEATGAAVGFAGPMGIKVDMLLVDQEVANMYNFIIGANETDMHLKNVNYGRDFEGIVGDFRNVTIGEKCPECGKEITISRGTEVGHIFKLGTKYSESMGATFIDEDGKAKPFIMGCYGIGVTRTVASIIEQHNDENGIIWPLEVAPYHVSVIPANVKNEEQATKAEEIYNELRKMGVEALLDDRKERAGVKFKDSELMGIPMRITVGKMIGEGQVEFKLRNGGEVETLSIEEVYNRVREEFERANLSL

Annotated regions:
phrase: EAEIESHKLMLRAGLMRKMAAGIYNYMPLGLKVIENVKNIVREEMNNAGAQEFLASALIPAELWQESGRWDAYGAEMFRLKDRHNRDFCLGPTHEEVFTDIVRNEIKSYKQLPLNLYQIQTKYRDERRPRFGVMRSREFIMKDGYSFDKDQEGLDLAYEKMRKAYVNIFNRCGLDAKAVAADSGAIGGSGSAEFMVKSEVGEDDVVFCTACDYAANIEKAPSTPEHGEKEELMEVEKVETPAVKSIEDLAKFFECSPKKIAKTLIFQADDKVVAVVLRGDREANEVKIANAIGEVIELEMASEEAVKEATGAAVGFAGPMGIKVDMLLVDQEVANMYNFIIGANETDMHLKNVNYGRDFEGIVGDFRNVTIGEKCPECGKEITISRGTEVGHIFKLGTKYSESMGATFIDEDGKAKPFIMGCYGIGVTRTVASIIE
type: DOMAIN
name: ProRS_core_prok
description: Prokaryote proline-tRNA ligase core domain

phrase: TPAVKSIEDLAKFFECSPKKIAKTLIFQADDKVVAVVLRGDREANEVKIANAIGEVIELEMASEEAVKEATGAAVGFAGPMGIKVDMLLVDQEVANMYNFIIGANETDMHLKNV
type: DOMAIN
name: YbaK/aa-tRNA-synth-assoc-dom
description: YbaK/aminoacyl-tRNA synthetase-associated domain

phrase: FRLKDRHNRDFCLGPTHEEVFTDIVRNEIKSYKQLPLNLYQIQTKYRDERRPRFGVMRSREFIMKDGYSFDKDQEGLDLAYEKMRKAYVNIFNRCGLDAKAVAADSGAIGGSGSAEFMVKSEVGEDDVVFCTACDYAANIEKAPSTPEHGEKEELMEVEKVETPAVKSIEDLAKFFECSPKKIAKTLIFQADDKVVAVVLRGDREANEVKIANAIGEVIELEMASEEAVKEATGAAVGFAGPMGIKVDMLLVDQEVANMYNFIIGANETDMHLKNVNYGRDFEGIVGDFRNVTIGEKCPECGKEITISRGTEVGHIFKLGTKYSESMGATFIDEDGKAKPFIMGCYGIGVTRTVASIIEQ
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: VSVIPANVKNEEQATKAEEIYNELRKMGVEALLDDRKERAGVKFKDSELMGIPMRITVGKMIGEGQVEFKLRNGGEVETLSIEEVYNRVR
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: GIYNYMPLGLKVIENVKNIVREEMNNAGAQEFLASALIPAELWQESGRWDAYGAEMFRLKDRHNRDFCLGPTHEEVFTDIVRNEIKSYKQLPLNLYQIQTKYRDERRPRFGVMRSREFIMKDGYSFDKDQEGLDLAYEKMRKAYVNIFNRCGLDAKAVAADSGAIGGSGSAEFMVKSEVGEDDVVFCTACDYAANIEKAPSTPEHGEKEELMEVEKVETPAVKSIEDLAKFFECSPKKIAKTLIFQADDKVVAVVLRGDREANEVKIANAIGEVIELEMASEEAVKEATGAAVGFAGPMGIKVDMLLVDQEVANMYNFIIGANETDMHLKNVNYGRDFEGIVGDFRNVTIGEKCPECGKEITISRGTEVGHIFKLGTKYSESMGATFIDEDGKAKPFIMGCYGIGVTRTVASIIEQHNDENGIIW
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: PYHVSVIPANVKNEEQATKAEEIYNELRKMGVEALLDDRKERAGVKFKDSELMGIPMRITVGKMIGEGQVEFKLRNGGEVETLSIEEVYNR
type: DOMAIN
name: ProRS_anticodon_short
description: Proline--tRNA ligase, anticodon binding domain
Protein sequence:
MKRERGRRGRKRVCSFCVDKATSIDYKETSKLRKYVTERGKILPRRISGNCAHHQRMLTTAIKRSRNIALLPFSTEA

Annotated regions:
phrase: IDYKETSKLRKYVTERGKILPRR
type: CONSERVED_SITE
name: Ribosomal_bS18_CS
description: Small ribosomal subunit protein bS18, conserved site