nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
QPRRKLCILHRNPGRCYDKIPAFYYNQKKKQCERFDWSGCGGNSNRFKTIEECRRTCIG

Annotated regions:
phrase: RKLCILHRNPGRCY
type: DOMAIN
name: Kunitz_BPTI
description: Pancreatic trypsin inhibitor Kunitz domain

phrase: CERFDWSGCG
type: DOMAIN
name: Kunitz_BPTI
description: Pancreatic trypsin inhibitor Kunitz domain

phrase: GNSNRFKTIEECRRT
type: DOMAIN
name: Kunitz_BPTI
description: Pancreatic trypsin inhibitor Kunitz domain

phrase: CILHRNPGRCYDKIPAFYYNQKKKQCERFDWSGCGGNSNRFKTIEECRRT
type: DOMAIN
name: Kunitz_BPTI
description: Pancreatic trypsin inhibitor Kunitz domain

phrase: KLCILHRNPGRCYDKIPAFYYNQKKKQCERFDWSGCGGNSNRFKTIEECRRTC
type: DOMAIN
name: Kunitz_BPTI
description: Pancreatic trypsin inhibitor Kunitz domain

phrase: FDWSGCGGNSNRFKTIEE
type: CONSERVED_SITE
name: Prtase_inh_Kunz-CS
description: Proteinase inhibitor I2, Kunitz, conserved site

phrase: CILHRNPGRCYDKIPAFYYNQKKKQCERFDWSGCGGNSNRFKTIEECRRT
type: DOMAIN
name: Kunitz_BPTI
description: Pancreatic trypsin inhibitor Kunitz domain
Protein sequence:
MIGKLSGRVDSSYDDYVIIDVSGVGYRVFASAKTLSKLSEGESYKLFIETHVREDHINLYGFLSLEEKSFFNLLQSVNGIGTRMALSILSALTPTDIQIAINNEDKNIFKAISGVGAKLAERIVRELSDKVAKISSSSAAIKDSLNIKGITPVASSEVIKALINMGFSRFEAQNAVQEIITKNPEISIDELIRTALKNRNSNF

Annotated regions:
phrase: ASSEVIKALINMGFSRFEAQNAVQEIITKNPEISIDELIRTAL
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal

phrase: NLLQSVNGIGTRMALSILS
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: NIFKAISGVGAKLAERIVR
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: MIGKLSGRVDSSYDDYVIIDVSGVGYRVFASAKTLSKLSEGESYKLFIETHVREDHINLY
type: DOMAIN
name: DNA_helicase_Holl-junc_RuvA_I
description: DNA helicase, Holliday junction RuvA type, domain I, bacterial

phrase: ASSEVIKALINMGFSRFEAQNAVQEIITKNPEISIDELIRTAL
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal
Protein sequence:
MIGWLRGERIEHWSQGGRQGLVIACAGVGYEVQLASRYLQPLSAGATCTVWIHQVQRDDGSSLFGFPDRRERDLFRVLISVNGIGPQVGLALLESCSAAELIEAIIDGDLRRLTQAQGVGKRTAERLAVELRDRLGAWSAEKNSDHSDLSLVDRSDLKSLPIEPDPLQDLQLTLSTLGYEDLEIRRAMRAVATGEEVPAANDGDGWLRASLRWLNRPSA

Annotated regions:
phrase: RVLISVNGIGPQVGLALLE
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: RRLTQAQGVGKRTAERLAV
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: DPLQDLQLTLSTLGYEDLEIRRAMRAVATGEEVPAANDGDGWLRASLRW
type: DOMAIN
name: RuvA_C
description: Holliday junction DNA helicase RuvA, C-terminal

phrase: MIGWLRGERIEHWSQGGRQGLVIACAGVGYEVQLASRYLQPLSAGATCTVWIHQVQRDDGSSLF
type: DOMAIN
name: DNA_helicase_Holl-junc_RuvA_I
description: DNA helicase, Holliday junction RuvA type, domain I, bacterial
Protein sequence:
MMYQPDREPGEDSCLVLSSSSVQRCTGSQRGCMPCTWAASKAFVGIGLQACVLTSSILHIDLLTRNSTCLILMIISMYVLSLIRVPISKMETIVTVCRSIQALATLVAASVWVAGSAVKKEHLLIVVTVCILFVFIAGTQISLFYVICSANGTGTHFRASLLAIIGGCVLGVSVKLVELKDVPIGIGIAIAIIASCQDFGLALRDTCHYRIGRYACMRTFTDLGRGINYRWVTDVEAVPKIEEVAEEKVSLFKFFKEMPGVIFSPAVGTHATPIIWIVLRLVYGISNVWQTPAYVVFCLTVGHVSAMLLEQLVIRVNYTAEASSGIHSTAHAVCMVLAAFGYGVAAPLSLAFTVSGGILGALYLRKRATGARRLAATHISRWLIVCVYVAAGLCYATIITH

Annotated regions:
Protein sequence:
MALSQSVPFSATELLLASAIFCLVFWVLRGSRPRVPKGLKSPPEPWGWPLLGHVLTLGKNPHLALSRMSQLYGDVLQIRIGSTPVLVLSGLDTIRQALVRQGDDFKGRPDLYSFTFITDGQSMSFSPDSGPVWAARRRLAQNALNTFSIASDPASSSSCYLEEHVSKEAEALISRLQELMAGPGHFNPYNQVVVSVANVIGAMCFGQHFPE

Annotated regions:
Protein sequence:
MSVRYSSSKHYSSSRSGGGGGGGGCGGGGGVSSLRISSSKGSLGGGFSSGGFSGGSFSRGSSGGGCFGGSSGGYGGLGGFGGGSFRGSYGSSSFGGSYGGIFGGGSFGGGSFGGGSFGGGGFGGGGFGGGFGGGFGGDGGLLSGNEKVTMQNLNDRLASYLDKVRALEESNYELEGKIKEWYEKHGNSHQGEPRDYSKYYKTIDDLKNQILNLTTDNANILLQIDNARLAADDFRLKYENEVALRQSVEADINGLRRVLDELTLTKADLEMQIESLTEELAYLKKNHEEEMKDLRNVSTGDVNVEMNAAPGVDLTQLLNNMRSQYEQLAEQNRKDAEAWFNEKSKELTTEIDNNIEQISSYKSEITELRRNVQALEIELQSQLALKQSLEASLAETEGRYCVQLSQIQAQISALEEQLQQIRAETECQNTEYQQLLDIKIRLENEIQTYRSLLEGEGSSGGGGRGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSGGGYGGGSSSGGHKSSSSGSVGESSSKGPRY

Annotated regions:
phrase: IQTYRSLL
type: CONSERVED_SITE
name: IF_conserved
description: Intermediate filament protein, conserved site

phrase: EKVTMQNLNDRLASYLDKVRALEESNYELEGKIKEWYEKHGNSHQGEPRDYSKYYKTIDDLKNQILNLTTDNANILLQIDNARLAADDFRLKYENEVALRQSVEADINGLRRVLDELTLTKADLEMQIESLTEELAYLKKNHEEEMKDLRNVSTGDVNVEMNAAPGVDLTQLLNNMRSQYEQLAEQNRKDAEAWFNEKSKELTTEIDNNIEQISSYKSEITELRRNVQALEIELQSQLALKQSLEASLAETEGRYCVQLSQIQAQISALEEQLQQIRAETECQNTEYQQLLDIKIRLENEIQTYRSLLEGEGSS
type: DOMAIN
name: IF_rod_dom
description: Intermediate filament, rod domain

phrase: NEKVTMQNLNDRLASYLDKVRALEESNYELEGKIKEWYEKHGNSHQGEPRDYSKYYKTIDDLKNQILNLTTDNANILLQIDNARLAADDFRLKYENEVALRQSVEADINGLRRVLDELTLTKADLEMQIESLTEELAYLKKNHEEEMKDLRNVSTGDVNVEMNAAPGVDLTQLLNNMRSQYEQLAEQNRKDAEAWFNEKSKELTTEIDNNIEQISSYKSEITELRRNVQALEIELQSQLALKQSLEASLAETEGRYCVQLSQIQAQISALEEQLQQIRAETECQNTEYQQLLDIKIRLENEIQTYRSLLEGEGS
type: DOMAIN
name: IF_rod_dom
description: Intermediate filament, rod domain

phrase: NEKVTMQNLNDRLASYLDKVRALEESNYELEGKIKEWYEKHGNSHQGEPRDYSKYYKTIDDLKNQILNLTTDNANILLQIDNARLAADDFRLKYENEVALRQSVEADINGLRRVLDELTLTKADLEMQIESLTEELAYLKKNHEEEMKDLRNVSTGDVNVEMNAAPGVDLTQLLNNMRSQYEQLAEQNRKDAEAWFNEKSKELTTEIDNNIEQISSYKSEITELRRNVQALEIELQSQLALKQSLEASLAETEGRYCVQLSQIQAQISALEEQLQQIRAETECQNTEYQQLLDIKIRLENEIQTYRSLLEGE
type: DOMAIN
name: IF_rod_dom
description: Intermediate filament, rod domain
Protein sequence:
MSLPNSSCLLEDKMCESNKTTMASPQLMPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLGRPLCLFWLSMDYVASTASIFSVFILCIDRYRSVQQPLRYLKYRTKTRASATILGAWFLSFLWVIPILGWNHFMQQTSVRREDKCETDFYDVTWFKVMTAIINFYLPTLLMLWFYAKIYKAVRQHCQHRELINGSLPSFSEIKLRPENPKGDAKKPGKESPWEVLKRKPKDAGGGSVLKSPSQTPKEMKSPVVFSQEDDREVDKLHCFPLDIVHMQTAAEGSSRDYVAVNQSHGQLKTDEQGLNTHGASEISEDQMLGDSQSFSRTDSDTTTETASGKGKLRSGSNTGLGYIKFTWKRLRSHSRQYVSGLHMNRERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKNCCNEHLHMFTIWLGYINSTLNPLIYPLCNENFKKTFKRILHIRS

Annotated regions:
phrase: LNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLGRPLCLFWLSMDYVASTASIFSVFILCIDRYRSVQQPLRYLKYRTKTRASATILGAWFLSFLWVIPILGWNHFMQQTSVRREDKCETDFYDVTWFKVMTAIINFYLPTLLMLWFYAKIYKAVRQHCQHRELINGSLPSFSEIKLRPENPKGDAKKPGKESPWEVLKRKPKDAGGGSVLKSPSQTPKEMKSPVVFSQEDDREVDKLHCFPLDIVHMQTAAEGSSRDYVAVNQSHGQLKTDEQGLNTHGASEISEDQMLGDSQSFSRTDSDTTTETASGKGKLRSGSNTGLGYIKFTWKRLRSHSRQYVSGLHMNRERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKNCCNEHLHMFTIWLGYINSTLNPLI
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM
Protein sequence:
MIRGNDPILLTPGPLTTSLATKQAMLRDWGSWDAAFNAITGSLCEDLVRIVHGEGTHVCVPMQGSGTFSVEAAIANVVPRDGKVLVPQNGAYCQRILKICKVLGRAHVELPIPEDRPATAAAIEAALKKDPSITHVAQVHCETGAGVLNPLPEIAAVCARLGKGLIVDAMSSFGAIEIDARTMPFDALVAATGKCIEGVPGMGFVLVKKTVLEGSQGNSHSLALDLYDQYTYMQKTTQWRFTPPTHVVAAFRTALDQFLEEGGQPVRGERYRRNYETLVQGMAVLGFRPFLSPDVQAPIIVTFHAPADARYDFRTFYEKVRSRGYILYPGKLTQVETFRVGCIGAIDDNEMRNVVSAIGETLREMGISMQPEGRVRAA

Annotated regions:
phrase: MQGSGTFSVEAAIANVVPRDGKVLVPQNGAYCQRILKICKVLGRAHVELPIPEDRPATAAAIEAALKKDPSITHVAQVHCETGAGVLNPLPEIAAVCARLGKGLIVDAMSSFGAIEIDARTMPFDALVAATGKCIEGVPGMGFVLVKKTVLEGSQGNSHSLALDLYDQYTYMQKTTQWRFTPPTHVVAAFRTALDQFLEEGGQPVRGERYRRNYETLVQGMAVLGFRPFLSPDVQAPIIVTF
type: DOMAIN
name: Aminotrans_V_dom
description: Aminotransferase class V domain
Protein sequence:
MLSPELHVLVLAGGESTRIRTGGPKALLDLCGKPLLEHVLRTASSLPAASRVLLLGSRHRGPIEKWLAESAYRDWKVVLQAEAKGTGHAVAAALPVLPPAGRLLILYGDTPLLSPDSLRALVEAEGGGLLTAVLADPAGYGRIVRDEPGELRAIVEDADCDEETAAIQEVNAGVYCLDLAILRRALAELTADNAQGELYLTDAALAVLEETGGVTVCLENAPEEILGVNTLQDLALVAGVRRQLLLEEHMAAGVIVDDPATTYVEEDVQIGAGSRIGPFSVLRSGVRIGRGCHVGPFAHLRAGTVLADGAEIGNFVETKNAELGEGAKAKHLSYLGDVAVGARANIGAGTITANYDGKAKHRTVVGERAFIGSGTVLVAPVRVGRNAVTGAGAVVTRNHDVADGATVVGVPARPLHVPAAEKPE

Annotated regions:
phrase: GVRIGRGCHVGPFAHLRAGTVLADGAEIGNFV
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: TVVGERAFIGSGTVLVAPVRVGRNAVTGAGAVVT
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: VLVLAGGESTRIRTGGPKALLDLCGKPLLEHVLRTASSLPAASRVLLLGSRHRGPIEKWLAESAYRDWKVVLQAEAKGTGHAVAAALPVLPPAGRLLILYGDTPLLSPDSLRALVEAEGGGLLTAVLADPA
type: DOMAIN
name: MobA-like_NTP_Trfase
description: MobA-like NTP transferase
Protein sequence:
MGLSRQELFGKLLEQIHFPEKDNSAFRNAAVQSVVVHKKSRQWEFHLIFNKALPYDLFTQFNQSLQLGFKDIAKVSLKISTPMTELDESQIANYWQFIINKAISDTPMLQQACLQTAPEVKDGRVTLVVENEVIKDLLAQKALDKIEKSYQELGFPKFRIHPFVDQSASQAKIEELKAKHEKADAALAAKAAARIKKNEAAKKTAKKSAPVAPADGPVQLGRMIDSKQNVIQMKDIEGEERSVVVEGYVFNAEIRELRSGRQLLTFEITDYTSSFSVKKFSRNSDEEAQFANIKAGMWLKVRGPVQEDTWMRDLVITAYDVNEVTHIARQDKAPQDDKRVELHTHTTMSQMDATNSITELATRAHKWGHPAIAVTDHGNVQAFPEAFSVAQKTGIKMLYGMEANVVDDGIPLVYNENHEELAHQTYVIFDVETTGLSAIYDKVIELSAVKMQDGNVLERFDEFIDPGFPLSEQTTNLTSITTEMVQGSKTEEEVFQMFKDFCKGCIIAGHNVSFDMGFMNTGYERHQMGKIAEPVIDTLPLARFLYPDMRGYRLNTLSKKFKVALEHHHRANYDSEATGHLLYKFLKDAEARYDVKYVDDLNKHMEENNAYRHARPFHVTIFAQTQAGLKNLFKLVSLSNVEYFYRVPRIPRTVLTKYREGLLLGTACSSGEVFTAMMEKGYDQALEKARYYDFIEVQPKPNYAPLLEQHVIADEGHLEDILKNMVKLGDELEKTVVATGDVHYLDPHDGIYRKILINSQGGANPLNR

Annotated regions:
phrase: NAYRHARPFHVTIFAQTQAGLKNLFKLVSLSNVEYFYRVPRIPRTVLTKYREGLLLGTACSSGEVFTAMMEKGYDQALEKARY
type: DOMAIN
name: PHP_dom
description: PHP domain

phrase: VIFDVETTGLSAIYDKVIELSAVKMQDGNVLERFDEFIDPGFPLSEQTTNLTSITTEMVQGSKTEEEVFQMFKDFCKGCIIAGHNVSFDMGFMNTGYERHQMGKIAEPVIDTLPLARFLYPDMRGYRLNTLSKKFKVALEHHHRANYDSEAT
type: DOMAIN
name: Exonuclease_RNaseT/DNA_pol3
description: Exonuclease, RNase T/DNA polymerase III

phrase: TYVIFDVETTGLSAIYDKVIELSAVKMQDGNVLERFDEFIDPGFPLSEQTTNLTSITTEMVQGSKTEEEVFQMFKDFCKGCIIAGHNVSFDMGFMNTGYERHQMGKIAEPVIDTLPLARFLYPDMRGYRLNTLSKKFKVALEHHHRANYDSEATGHLLYKFLKDAE
type: DOMAIN
name: Exonuclease_RNaseT/DNA_pol3
description: Exonuclease, RNase T/DNA polymerase III

phrase: VVVEGYVFNAEIRELRSGRQLLTFEITDYTSSFSVKKFSRNSDEEAQFANIKAGMWLKVRGPVQE
type: DOMAIN
name: NA-bd_OB_tRNA
description: OB-fold nucleic acid binding domain, AA-tRNA synthetase-type

phrase: LFGKLLEQIHFPEKDNSAFRNAAVQSVVVHKKSRQWEFHLIFNKALPYDLFTQFNQSLQLGFKDIAKVSLK
type: DOMAIN
name: DNA_PolC-type_N_I
description: DNA polymerase III PolC-type, N-terminal domain I

phrase: ELHTHTTMSQMDATNSITELATRAHKWGHPAIAVTDHGNVQAFPEAFSVAQKTGIKMLYGMEANVVDDGIPLVYNENHEELAHQT
type: DOMAIN
name: PHP_dom
description: PHP domain

phrase: VELHTHTTMSQMDATNSITELATRAHKWGHPAIAVTDHGNVQAFPEAFSVAQKTGIKMLYGMEANVV
type: DOMAIN
name: Pol/His_phosphatase_N
description: Polymerase/histidinol phosphatase, N-terminal

phrase: YWQFIINKAISDTPMLQQACLQTAPEVKDGRVTLVVENEVIKDLLAQKALDKIEKSYQELGFPKFRIHPFVDQSASQAKIEELKAKHEKADAALAAKAAARIKKNEAAKKTAK
type: DOMAIN
name: DNA_PolC-like_N_II
description: DNA polymerase III PolC-like, N-terminal domain II

phrase: ELAHQTYVIFDVETTGLSAIYDKVIELSAVKMQDGNVLERFDEFIDPGFPLSEQTTNLTSITTEMVQGSKTEEEVFQMFKDFCKGCIIAGHNVSFDMGFMNTGYERHQMGKIAEPVIDTLPLARFLYPDMRGYRLNTLSKKFKVALEHHHRANYDSEATGHLLYKFLKDAEARYDVKYVDDLNKHMEENNAYRHARPFHVTIFAQTQAGLKNLFKLVSL
type: DOMAIN
name: DnaQ
description: DNA polymerase III epsilon subunit, exonuclease domain
Protein sequence:
MLTLARQQQRQNIRWLLCLSVLMLLALLLSLCAGEQWISPGDWFSPRGELFVWQIRLPRTLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLIAAVLLGQGQLLNWALGLCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALMTWAIYFSTSVDLRQLMYWMMGGFGGVDWRQSWLMLALIPVLLWICCQSRPMNMLALGEISARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIGLVIPHILRLCGLTDHRVLLPGCALAGASALLLADIVARLALAVAELPIGVVTATLGAPVFIWLLLKAGR

Annotated regions:
Protein sequence:
MNKQRGTFSEVSLAQDPKRQQRKPKGNKSSISGTEQEIFQVELNLQNPSLNHQGIDKIYDCQGLLPPPEKLTAEVLGIICIVLMATVLKTIVLIPFLEQNNFSPNTRTQKARHCGHCPEEWITYSNSCYYIGKERRTWEESLLACTSKNSSLLSIDNEEEMKFLASILPSSWIGVFRNSSHHPWVTINGLAFKHKIKDSDNAELNCAVLQVNRLKSAQCGSSMIYHCKHKL

Annotated regions:
phrase: CPEEWITYSNSCYYIGKERRTWEESLLACTSKNSSLLSIDNEEEMKFLASILPSSWIGVFRNSSHHPWVTINGLAFKHKIKDSDNAELNCAVLQVNRLKSAQCGSSMIYHCK
type: DOMAIN
name: NKR-like_CTLD
description: Natural killer cell receptor-like, C-type lectin-like domain

phrase: CPEEWITYSNSCYYIGKERRTWEESLLACTSKNSSLLSIDNEEEMKFLASILPSSWIGVFRNSSHHPWVTINGLAFKHKIKDSDNAELNCAVLQVNRLKSAQCGSSMIYHC
type: DOMAIN
name: C-type_lectin-like
description: C-type lectin-like

phrase: RRTWEESLLACTSKNSSLLSIDNEEEMKFLASILPSSWIGVFRNSSHHPWVTINGLAFKHKIKDSDNAELNCAVLQVNRLKSAQCGSSMIYHC
type: DOMAIN
name: C-type_lectin-like
description: C-type lectin-like

phrase: YSNSCYYIGKERRTWEESLLACTSKNSSLLSIDNEEEMKFLASILPSSWIGVFRNSSHHPWVTINGLAFKHKIKDSDNAELNCAVLQVNRLKSAQCGSSMIYHC
type: DOMAIN
name: C-type_lectin-like
description: C-type lectin-like
Protein sequence:
MDRLYYENPYDVVVVGAGHAGCEAALATARLGLKTAIMSISLDSVADLPCNPNIGGTGKGHLVKEVDALGGEMGLVIDKTYIQSRMLNTSKGPAVHSLRVQADKRKYHDEMKSVLENTENLDLIEAEVVDIEVEDNKIKSITTAQGAIFPTRAVILATGTYLKGLVMMGEYTYESGPHGMKSSKKLSYSLKNLGIELRRFKTGTPARVHRDSLNYEVMTVQPGDDDVIPFSFLNDGKDISKKQEHCYLTYTTLKTKQIIEDNLERSPMYAGIVKGVGPRYCPSIEDKIVRFPDRDEHQVFVEPEGLSTKEMYIQGVSSTLPEEVQKEMYKTIIGFENVRFMRSAYGIEYDCIDPTILKRTLEHLEINNLFFAGQINGSSGYEEAAGQGIIAGINAAMNLLGKEPFVLDRSDAYIGVLIDDLVTKGTNEPYRMMTSRCEYRLTLRQDNADLRLTERAHEIGLATDERYEKMLHKKKTIDEEIERLKSIMVTPTEETNEKLRNLGSSELKTGITLLDLIKRPELTYDKTEEFDAERTELPRYLRLQVETHIKYEGYIAKQMSQIKQFKKLENRKLDMIEDYKEVMGLSNEAVQKLNDIKPESLGQASRISGVSPSDINVLLIYMETRKK

Annotated regions:
phrase: DVVVVGAGHAGCEAALATARLGLKTAIMSISLDSVADLPCNPNIGGTGKGHLVKEVDALGGEMGLVIDKTYIQSRMLNTSKGPAVHSLRVQADKRKYHDEMKSVLENTENLDLIEAEVVDIEVEDNKIKSITTAQGAIFPTRAVILATGTYLKGLVMMGEYTYESGPHGMKSSKKLSYSLKNLGIELRRFKTGTPARVHRDSLNYEVMTVQPGDDDVIPFSFLNDGKDISKKQEHCYLTYTTLKTKQIIEDNLERSPMYAGIVKGVGPRYCPSIEDKIVRFPDRDEHQVFVEPEGLSTKEMYIQGVSSTLPEEVQKEMYKTIIGFENVRFMRSAYGIEYDCIDPTILKRTLEHLEINNLFFAGQINGSSGYEEAAGQGIIAGINAAMNLLGK
type: DOMAIN
name: MnmG_N
description: MnmG, N-terminal domain

phrase: IKYEGYIAKQMSQIKQFKKLENRKLDMIEDYKEVMGLSNEAVQKLNDIKPESLGQASRISGVSPSDINVLL
type: DOMAIN
name: MnmG_C_subdom
description: tRNA uridine 5-carboxymethylaminomethyl modification enzyme, C-terminal subdomain

phrase: GPRYCPSIEDKIVR
type: CONSERVED_SITE
name: MnmG-rel_CS
description: MnmG-related, conserved site

phrase: KQFKKLENRKLDMIEDYKEVMGLSNEAVQKLNDIKPESLGQASRISGVSPSDINVL
type: DOMAIN
name: MnmG_C
description: tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG, C-terminal

phrase: AGQINGSSGYEEAAGQGIIAGIN
type: CONSERVED_SITE
name: MnmG-rel_CS
description: MnmG-related, conserved site

phrase: DERYEKMLHKKKTIDEEIERLKSIMVTPTEETNEKLRNLGSSELKTGITLLDLIKRPELTYDKTEEFDAERTELPRYLRLQVETHIKYEGYIAKQ
type: DOMAIN
name: GIDA_C_N
description: tRNA uridine 5-carboxymethylaminomethyl modification enzyme, C-terminal, N-terninal subdomain
Protein sequence:
MNHKVLLINGPNLNLLGRREPSVYGHQTLADIVATLSEQAQAAGVELEHIQSNAEFELINAIHATDAQMIIINPAAFTHTSVALRDALLGVDIPFFEVHLSNVHAREPFRHHSYLSDKAIGVICGFGAQGYEFALAAAIKRLKA

Annotated regions:
phrase: INGPNLNLLGRREPSVY
type: CONSERVED_SITE
name: DHquinase_II_CS
description: Dehydroquinase, class II, conserved site
Protein sequence:
MGRCLRNHSITYKTPKVPYERERFDAELKLVGQFGLKNKKEIQRVHYMLGHMRTIAKVMLMKDAKDPKRLLEGAALLRRLHNLGILPRDQNKLEFVLALKEENLLERRLQTLVYRKGFAKSIHHARVLIRGKMIKVGKQVVDVPSFLVRVESEPLIQLADNTPLTNPEINGRRKRKNNHAGKEDN

Annotated regions:
phrase: RRLQTLVYRKGFAKSIHHARVLIRGKMIKVGKQVVDVPSFLVRV
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: SITYKTPKVPYERERFDAELKLVGQFGLKNKKEIQRVHYMLGHMRTIAKVMLMKDAKDPKRLLEGAALLRRLHNLGILPRDQNKLEFVL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: LERRLQTLVYRKGFAKSIHHARVL
type: CONSERVED_SITE
name: Ribosomal_uS4_CS
description: Small ribosomal subunit protein uS4, conserved site

phrase: RRLQTLVYRKGFAKSIHHARVLIRGKMIKVGKQVVDVPSFLVRVESEPLIQLADNTPLTNPEINGRRKRKNN
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: RNHSITYKTPKVPYERERFDAELKLVGQFGLKNKKEIQRVHYMLGHMRTIAKVMLMKDAKDPKRLLEGAALLRRLHNLGILPRDQNKLEFVLALKEENLL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal
Protein sequence:
MALAGTGVFAEILDGEVYRYYADGEWRTSASGKSVAIVNPTTRKTQYRVQACTQEEVNKAMDAAKVAQKAWARTPLWKRADVLHKAAAILKEHKAPIAECLVKEIAKPAKDAVSEVVRSGDLVSYTAEEGVRILGEGKLVVSDSFPGNERNKYCLSSKIPLGVVLAIPPFNYPANLAGSKIGPALIAGNALVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGGDTGIAISKKAGMVPLQMELGGKDACIVLEDADLDLVSANIVKGGFSYSGQRCTAVKVVLIMESIADAVVQKVNAKLAKLKVGPPEDDSDITPVVTESSANFIEGLVMDAKEKGATFCQEYRREGNLIWPLLLDHVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCIFTRDINKAILISDAMETGTVQINSAPARGPDHFSFQGLKDSGIGSQGITNSINMMTKVKSTVINLPSPSYTMG

Annotated regions:
phrase: FSYSGQRCTAV
type: CONSERVED_SITE
name: Ald_DH_CS_CYS
description: Aldehyde dehydrogenase, cysteine active site

phrase: WRTSASGKSVAIVNPTTRKTQYRVQACTQEEVNKAMDAAKVAQKAWARTPLWKRADVLHKAAAILKEHKAPIAECLVKEIAKPAKDAVSEVVRSGDLVSYTAEEGVRILGEGKLVVSDSFPGNERNKYCLSSKIPLGVVLAIPPFNYPANLAGSKIGPALIAGNALVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGGDTGIAISKKAGMVPLQMELGGKDACIVLEDADLDLVSANIVKGGFSYSGQRCTAVKVVLIMESIADAVVQKVNAKLAKLKVGPPEDDSDITPVVTESSANFIEGLVMDAKEKGATFCQEYRREGNLIWPLLLDHVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCIFTRDINKAILISDAMETGTVQINSAPARGPDHFSFQGLKDSGIGSQGITNSINMMTKVK
type: DOMAIN
name: Aldehyde_DH_dom
description: Aldehyde dehydrogenase domain

phrase: MELGGKD
type: CONSERVED_SITE
name: Ald_DH_CS_GLU
description: Aldehyde dehydrogenase, glutamic acid active site
Protein sequence:
MQNDPIGLMDSGVGGLTVLKEVQRLLPTENTVFLGDQARLPYGPRSVAEVTMFTKQIAQFLRQQARIKALVIACNTATAAALTTMQQTLPIPVIGVIAPGAQAAVQTTRNHRIGVIATAGTVKSDQYRRDILAAAPNSQIFSVACPEMVTLAEQNDLTTTHAQSVVAANLASLMDKKIDTLVMGCTHFPLLRSAIQHAVGSQVTLVDPGLATAEQTVAILKTRGLLNSATTRGTAQFFTTGETDQFDTLASQWLDQQPTPAKHVAIAQLTTPMEVN

Annotated regions:
phrase: VIACNTAT
type: ACTIVE_SITE
name: Asp/Glu_racemase_AS_1
description: Asp/Glu racemase, active site 1

phrase: LVMGCTHFPL
type: ACTIVE_SITE
name: Asp/Glu_racemase_AS_2
description: Asp/Glu racemase, active site 2
Protein sequence:
MAERRLSDLGLTPMSGNDVVVSGLALDSRKVKPGTLFAAIPGTRVHGAEFIQYALRMGAGAVLTDRAGAEIAAEELAASYAVLVVVEDAAEALAHSAALFFGAQPETMVAVTGTNGKTSVASFTRQIWEALKINAVNIGTTGVEGAYEAPGIHTTPEPVTLHSVLADMAAAGVTHAAMEASSHGLDQSRMDGVRLAAAAFTNLTQDHLDYHGTMEAYFEAKLRLFTGLLPEDGVAVVNLDDPHGPRVAEACEARGIEVLGVAQYAEAALKITGRRIDETGQDVLFRWQGEARQVRLNLIGAFQAMNVLTAAGLVIAGGEDPDAVFAVLPQMQGVRGRMQLAARRSHGAPIYVDYSHTPDSLDVALKALRPHVLGRLAVVFGAGGDRDTSKRPLMGKAACEGADVVFVTDDNPRTEDPAAIRAAVMAGCPEATEVADRAEAILRAVDMLEPGDALLIAGKGHETGQQMGDVVYPFDDVEQASVAVAALEGAI

Annotated regions:
phrase: VSGLALDSRKVKPGTLFAAIPGTRVHGAEFIQYALRMGAGAVLTDRAGAEIAAEELAASYAVLVVVEDAAEALAHSAAL
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: VTGTNGKTSVASFTRQIWEALKINAVNIGTTGVEGAYEAPGIHTTPEPVTLHSVLADMAAAGVTHAAMEASSHGLDQSRMDGVRLAAAAFTNLTQDHLDYHGTMEAYFEAKLRLFTGLLPEDGVAVVNLDDPHGPRVAEACEARGIEVLGVAQYAEAALKITGRRIDETGQDVLFRWQGEARQVRLNLIGAFQAMNVLTAAG
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRMQLAARRSHGAPIYVDYSHTPDSLDVALKALRPHVLGRLAVVFGAGGDRDTSKRPLMGKAACEGADVVFVTDDNPRTEDPAAIRAAVMAGCPEATEVADRAEAILRAVDMLEPGDALLIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MKVDINAIKELRDLTGAGVGDCKDALTSCNGDIEKAKTYLREQGIAKAYKKSNKDVSDGLVAICIDGNKGAILEVNSETDFVARNEKFQKLVLNLAFLANQYEIENIEDFLKCEYSNNTNINDEIMSNIAVIGENIHLNKIGCLSVSSGVVCGYIHNPIVDNLGKVGAIVALESKCDVEKLKIFARQIAMHIVATKPEALSLGVLDQNIIDKERDIIKKQVEQLNKPASVLEKIIDGRMAKFYQEVVLMNQMFIMDSQFTVSELIKKKEEELGSSINIVDYKLFIINK

Annotated regions:
phrase: GAILEVNSETDFVARNEKFQKLVLNLAFLANQYEIENIEDFLKCEYSNNTNINDEIMSNIAVIGENIHLNKIGCLSVSSGVVCGYIHNPIVDNLGKVGAIVALESKCDVEKLKIFARQIAMHIVATKPEALSLGVLDQNIIDKERDIIKKQVEQLNKPASVLEKIIDGRMAKFYQEVVLMNQMFIMDSQFTVSELIKKKEEELG
type: DOMAIN
name: Transl_elong_EFTs/EF1B_dimer
description: Translation elongation factor EFTs/EF1B, dimerisation

phrase: EVNSETDFVA
type: CONSERVED_SITE
name: Transl_elong_Ts_CS
description: Translation elongation factor Ts, conserved site
Protein sequence:
MGNVATRKRPGCHHHIGRNEENLDDDEDGPAKKRLRIGEPQAENEYQKLAFKSRLQKLKKCRPHLKRRTYKVEEADPRPPVPRFIVDDYGDYEKPEPTRKEFAIPWFEHLFLPEFPTRSVINEKSFVLERQLGRGSFGVVYCASAIHDSERKFAIKMQEKREIISKRAVLQVKREASIQRLLPSHPFIARTYSTWQTRTHLYSLLQYPTGSTGDLFSVWRQRGSLSEAAIRLIGAELASAIDFLHQNDVIYRDVKLENVVLDQWGHALLIDFGLAKKLKQGSSTGTICGTLQYMSPDVASGGTYSHYVDWWSLGVLLHILLTGIYPYPNSEATHHANLKFIDYSTPIGCSREFANLMDRMLAVSITHRLCSFTVLHAHPFFRSIDFSKLEQKDYTPAAEIGNAEYDTYHKSEDALDDALFKENYDVSCGRNVIFAVLPVFW

Annotated regions:
phrase: LGRGSFGVVYCASAIHDSERKFAIKMQEKREIISKRAVLQVKREASIQRLLPSHPFIARTYSTWQTRTHLYSLLQYPTGSTGDLFSVWRQRGSLSEAAIRLIGAELASAIDFLHQNDVIYRDVKLENVVLDQWGHALLIDFGLAKKLKQGSSTGTICGTLQYMSPDVASGGTYSHYVDWWSLGVLLHILLTGIYPYPNSEATHHANLKFIDYSTPIGCSREFANLMDRMLAVSITHRLCSFTVLHAHPF
type: DOMAIN
name: STKc_AGC
description: Serine/Threonine Kinase AGC, catalytic domain

phrase: FVLERQLGRGSFGVVYCASAIHDSERKFAIKMQEKREIISKRAVLQVKREASIQRLLPSHPFIARTYSTWQTRTHLYSLLQYPTGSTGDLFSVWRQRGSLSEAAIRLIGAELASAIDFLHQNDVIYRDVKLENVVLDQWGHALLIDFGLAKKLKQGSSTGTICGTLQYMSPDVASGGTYSHYVDWWSLGVLLHILLTGIYPYPNSEATHHANLKFIDYSTPIGCSREFANLMDRMLAVSITHRLCSFTVLHAHPF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: LGRGSFGVVYCASAIHDSERKFAI
type: BINDING_SITE
name: Protein_kinase_ATP_BS
description: Protein kinase, ATP binding site

phrase: VIYRDVKLENVV
type: ACTIVE_SITE
name: Ser/Thr_kinase_AS
description: Serine/threonine-protein kinase, active site

phrase: VLERQLGRGSFGVVYCASAIHDSERKFAIKMQEKREIISKRAVLQVKREASIQRLLPSHPFIARTYSTWQTRTHLYSLLQYPTGSTGDLFSVWRQRGSLSEAAIRLIGAELASAIDFLHQNDVIYRDVKLENVVLDQWGHALLIDFGLAKKLKQGSSTGTICGTLQYMSPDVASGGTYSHYVDWWSLGVLLHILLTGIYPYPNSEATHHANLKFIDYSTPIGCSREFANLMDRMLAVSITHRLCSFTVLHAHPF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: FVLERQLGRGSFGVVYCASAIHDSERKFAIKMQEKREIISKRAVLQVKREASIQRLLPSHPFIARTYSTWQTRTHLYSLLQYPTGSTGDLFSVWRQRGSLSEAAIRLIGAELASAIDFLHQNDVIYRDVKLENVVLDQWGHALLIDFGLAKKLKQGSSTGTICGTLQYMSPDVASGGTYSHYVDWWSLGVLLHILLTGIYPYPNSEATHHANLKFIDYSTPIGCSREFANLMDRMLAVSITHRLCSFTVLHAHPF
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain
Protein sequence:
MSDLYTIDPMLAKDAHVDRAHYKTLYHESLEQPEAFWSNIAQRLEWFKTPTKIKDVSYQLEDVHIRWFEDGELNASVNCLDRHLTLRGDKTALLFEPDAPDAPSSRITYRELYERVCQLGNALRHLNIEKGDRVTIYLPMIPDAVVAILACARIGAIHSVVFGGFAPNSIADRINDCGSKLIITADEGLRGGRKIPLKANVDAALKIHGTQSVETVLVVRHTGGTINMHTPRDRWFHHVVDIQATECAPERMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYTSYTHETVFDLRENDIYWCTADIGWITGHSYIVYGPLANGATVLLFEGVPHYPTVSRFWEVIDKHHVTLFYTAPTAIRALMREGDTPVKKTSRKSLRLLGSVGEPINPEAWHWYYTIVGNGRCPIVDTWWQTETGGILITPLIGATDLKPGSVTLPFFGIRPALVDTNGQILDGPAAGNLVLLDSWPGQMRTVYGDHQRFIDTYFRTYPNTYFTGDGCRRDADGYYWITGRVDDVINISGHRIGTAEIESTLVAHPKVAEAAVVGFPHPIKGQGIYAYVTLITGETPSEALHQELLTWVRKEIGAIATPDHVQWAPNLPKTRSGKIMRRILRKIAENAPDQLGDTSTLADPSIVDLLLNERLTH

Annotated regions:
phrase: RHLTLRGDKTALLFEPDAPDAPSSRITYRELYERVCQLGNALRHLNIEKGDRVTIYLPMIPDAVVAILACARIGAIHSVVFGGFAPNSIADRINDCGSKLIITADEGLRGGRKIPLKANVDAALKIHGTQSVETVLVVRHTGGTINMHTPRDRWFHHVVDIQATECAPERMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYTSYTHETVFDLRENDIYWCTADIGWITGHSYIVYGPLANGATVLLFEGVPHYPTVSRFWEVIDKHHVTLFYTAPTAIRALMREGDTPVKKTSRKSLRLLGSVGEPINPEAWHWYYTIVGNGRCPIVDTWWQTETGGILITPLIGATDLKPGSVTLPFFGIRPALVDTNGQILDGPAAGNL
type: DOMAIN
name: AMP-dep_synth/lig_dom
description: AMP-dependent synthetase/ligase domain

phrase: YKTLYHESLEQPEAFWSNIAQRLEWFKTPTKIKDVSYQLEDVHIRWFEDGELNASVN
type: DOMAIN
name: ACAS_N
description: Acetyl-coenzyme A synthetase, N-terminal domain

phrase: EIESTLVAHPKVAEAAVVGFPHPIKGQGIYAYVTLITGETPSEALHQELLTWVRKEIGAIATPDHVQWAPNLPKTRSG
type: DOMAIN
name: AMP-bd_C
description: AMP-binding enzyme, C-terminal domain

phrase: ILYTSGSTGKP
type: CONSERVED_SITE
name: AMP-binding_CS
description: AMP-binding, conserved site
Protein sequence:
MNLLQEALAKIQPVDAVMLAKAQAKLDKKTKPLGSLGRLEEFARRFVAITGDLQPDTAKKIVFTFAGDHGVVEEGVSAFPKEVTPQMVFNFLRGGAGVNVLARHTGAEVRVVDVGVDFDFEPTPGLIIDKVAKGTRNFAKGPAMSREEAIAAIEVGIGLANRAKAEGVAMLGTGEMGIGNTTPSSAIIAAISGKTVKEVTHRGTGINDAALSHKIRVIEQGLAVNKPDPRDPLDVLAKVGGLEIAAIAGLVLGAAANRQPVVIDGFISTAGALIASELNPHVKEYIFAAHESVEIGHRFMLDRIGAEPILDLKLRLGEGTGAALAMGLIEAGVKILKEMATFEEAGVAEGEY

Annotated regions: