nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MKILAYCVRPDEIDSFKNFSEKYGHTVDLIPDSFGPSVAHLAKGYDGISILGNDTCNREALEKIKDCGIKYLATRTAGVNNIDFDAAKEFGINVANVPAYSPNSVSEFTVGLALSLTRKIPFALKRVELNNFALGGLIGVELRNLTLGVIGTGRIGLKVIEGFSGFGMKKMIGYDIFENEKAKEYIEYKSLDEVYKEADIITLHAPLTDDNYHMIGKESIAKMKDGVFIINAARGALIDSEALIEGLKSGKIAGAALDSYEYEQGVFHNNKMNEIMKDDTLARLKSFPNVVITPHLGFYTDEAVSNMVEITLMNLQEFELKGTCKNQRVCK

Annotated regions:
phrase: LGVIGTGRIGLKVIEGFSGFGMKKMIGY
type: CONSERVED_SITE
name: D-isomer_DH_CS1
description: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1

phrase: VGLALSLTRKIPFALKRVELNNFALGGLIGVELRNLTLGVIGTGRIGLKVIEGFSGFGMKKMIGYDIFENEKAKEYIEYKSLDEVYKEADIITLHAPLTDDNYHMIGKESIAKMKDGVFIINAARGALIDSEALIEGLKSGKIAGAALDSYEYEQGVFHNNKMNEIMKDDTLARLKSFPNVVITPHL
type: DOMAIN
name: D-isomer_DH_NAD-bd
description: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain

phrase: MKDGVFIINAARGALI
type: CONSERVED_SITE
name: D-isomer_DH_CS
description: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site

phrase: VYKEADIITLHAPLTDDNYHMI
type: CONSERVED_SITE
name: D-isomer_DH_CS
description: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site

phrase: VRPDEIDSFKNFSEKYGHTVDLIPDSFGPSVAHLAKGYDGISILGNDTCNREALEKIKDCGIKYLATRTAGVNNIDFDAAKEFGINVANVPAYSPNSVSEFTVGLALSLTRKIPFALKRVELNNFALGGLIGVELRNLTLGVIGTGRIGLKVIEGFSGFGMKKMIGYDIFENEKAKEYIEYKSLDEVYKEADIITLHAPLTDDNYHMIGKESIAKMKDGVFIINAARGALIDSEALIEGLKSGKIAGAALDSYEYEQGVFHNNKMNEIMKDDTLARLKSFPNVVITPHLGFYTDEAVSNMVEITLMNLQEFELKGTCK
type: DOMAIN
name: D-isomer_2_OHA_DH_cat_dom
description: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
Protein sequence:
MIIDRLFDSVEKKGHVCLGLDTDITYVPEEFCKKFNSIEDAIFNFNKKIIDATLDVVSCYKVQIAYYEAYGLKGLLAYKRTLEYLREKKAIAIADIKRGDIAKTAEMYAKAHFEGDFEADFVTLNPYMGLDGIEPYMPYIEKMEKGLFILLRTSNKGAYDIQYIKTQGGKNVYDEVGEKIYDLGQKATGRSKYSSIGAVVGCTHVEEGVEIRNKFKNMFFLIPGYGAQGGTAKEVSLYLREGNGGVVNSSRGILLAYKKEENGEKIFDECARLAAINMRDEIRKTL

Annotated regions:
phrase: VCLGLDTDITYVPEEFCKKFNSIEDAIFNFNKKIIDATLDVVSCYKVQIAYYEAYGLKGLLAYKRTLEYLREKKAIAIADIKRGDIAKTAEMYAKAHFEGDFEADFVTLNPYMGLDGIEPYMPYIEKMEKGLFILLRTSNKGAYDIQYIKTQGGKNVYDEVGEKIYDLGQKATGRSKYSSIGAVVGCTHVEEGVEIRNKFKNMFFLIPGYGAQGGTAKEVSLYLREGNGGVVNSSRGILLAYKKEENGEK
type: DOMAIN
name: OMPdeCOase_dom
description: Orotidine 5'-phosphate decarboxylase domain

phrase: AIADIKRGDIAKT
type: ACTIVE_SITE
name: OMPdecase_AS
description: Orotidine 5'-phosphate decarboxylase, active site

phrase: HVCLGLDTDITYVPEEFCKKFNSIEDAIFNFNKKIIDATLDVVSCYKVQIAYYEAYGLKGLLAYKRTLEYLREKKAIAIADIKRGDIAKTAEMYAKAHFEGDFEADFVTLNPYMGLDGIEPYMPYIEKMEKGLFILLRTSNKGAYDIQYIKTQGGKNVYDEVGEKIYDLGQKATGRSKYSSIGAVVGCTHVEEGVEIRNKFKNMFFLIPGYGAQGGTAKEVSLYLREGNGGVVNSSRGILLAYKKEENGEK
type: DOMAIN
name: OMPdeCOase_dom
description: Orotidine 5'-phosphate decarboxylase domain
Protein sequence:
MNLHEFQAKALFREHGIPVPEGVAVSDPAALGEAISSLGGDAWVVKAQVHAGGRGKAGGVRLVKGSRELEHAVGELLGGRLATHQTGPAGLPINTVLVESLTDIGRELYLSLLVDRARRRVAIMASAAGGMDIETVAAESPEKIITLHVDPAAGYMPYQGRRVAFALGLEGPQVSALVKLLGQLYRLFVDSDASLVEINPLVVTKTGELIALDAKINLDDNGLYRHQALAELRDETQEDAREARAREHELNYVRLDGNIGCMVNGAGLAMATMDLIKLHGGEPANFLDVGGGTTAARVAEAFKLILSDEAVKAVFVNIFGGIVRCDLIAEGIINAVKEVHVTVPVVVRLEGTNVDQGKQMLAESGLNIITAESLTDGARRVVASVQ

Annotated regions:
phrase: MVNGAGLAMATMDLIKLHGGEPANFLDVGGGTTAARVAEAFKLILSDEAVKAVFVNIFGGIVRCDLIAEGIINAVKEVHVTVPVVVRLEGTNVDQGKQMLAESGLNIITAESLTDGAR
type: DOMAIN
name: SUCC_ACL_C
description: ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain

phrase: KALFREHGIPVPEGVAVSDPAALGEAISSLGGDAWVVKAQVHAGGRGKAGGVRLVKGSRELEHAVGELLGGRLATHQTGPAGLPINTVLVESLTDIGRELYLSLLVDRARRRVAIMASAAGGMDIETVAAESPEKIITLHVDPAAGYMPYQGRRVAFALGLEGPQVSALVKLLGQLYRLFVDSDASLVEINPLVVTKTGELIALDAKINLDDNGLYRHQA
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold

phrase: NLHEFQAKALFREHGIPVPEGVAVSDPAALGEAISSLGGDAWVVKAQVHAGGRGKAGGVRLVKGSRELEHAVGELLGGRLATHQTGPAGLPINTVLVESLTDIGRELYLSLLVDRARRRVAIMASAAGGMDIETVAAESPEKIITLHVDPAAGYMPYQGRRVAFALGLEGPQVSALVKLLGQLYRLFVDSDASLVEINPLV
type: DOMAIN
name: ATP-grasp_succ-CoA_synth-type
description: ATP-grasp fold, succinyl-CoA synthetase-type

phrase: GNIGCMVNGAGLAMATMDLIKLHGG
type: CONSERVED_SITE
name: Succ-CoA_synthase_bsu_CS
description: Succinyl-CoA synthetase, beta subunit, conserved site
Protein sequence:
MSKKYDAGVKEYRDTYWTPDYIPLDTDLLACFKCTGQEGVPREEVAAAVAAESSTGTWSTVWSELLTDLEFYKGRCYRIEEVPGDKESFYAFIAYPLDLFEEGSVTNVLTSLVGNVFGFKALRHLRLEDIRFPLAFIKTCGGPPNGIQVERDRMNKYGRPLLGCTIKPKLGLSGKNYGRVVYECLRGGLDFTKDDENINSQPFQRWQNRFEFVAEAVKTAEQETGERKGHYLNCTANTPEEMYERAEFAKELGQPIIMHDYITGGFTANTGLARWCRKNGILLHIHRAMHAVIDRHPKHGIHFRVLAKCLRLSGGDQLHTGTVVGKLEGDRQTTLGYIDQLRESFVPEDRTRGNFFDQDWASMPGVFAVASGGIHVWHMPALVAIFGDDSVLQFGGGTHGHPWGSAAGAAANRVALEACVKARNAGREIEKESRDILLEAAKHSPELAIALETWKEIKFEFDTVDKLDV

Annotated regions:
phrase: YWTPDYIPLDTDLLACFKCTGQEGVPREEVAAAVAAESSTGTWSTVWSELLTDLEFYKGRCYRIEEVPGDKESFYAFIAYPLDLFEEGSVTNVLTSLVGNVFGFKALRHLRLEDIRFPL
type: DOMAIN
name: RuBisCO_lsu_fd_N
description: Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal

phrase: GLDFTKDD
type: ACTIVE_SITE
name: RuBisCo_large_chain_AS
description: Ribulose bisphosphate carboxylase, large chain, active site

phrase: GIQVERDRMNKYGRPLLGCTIKPKLGLSGKNYGRVVYECLRGGLDFTKDDENINSQPFQRWQNRFEFVAEAVKTAEQETGERKGHYLNCTANTPEEMYERAEFAKELGQPIIMHDYITGGFTANTGLARWCRKNGILLHIHRAMHAVIDRHPKHGIHFRVLAKCLRLSGGDQLHTGTVVGKLEGDRQTTLGYIDQLRESFVPEDRTRGNFFDQDWASMPGVFAVASGGIHVWHMPALVAIFGDDSVLQFGGGTHGHPWGSAAGAAANRVALEACVKARNAGREIEKESRDILLEAAKHSPELAIALET
type: DOMAIN
name: RuBisCO_lsu_C
description: Ribulose bisphosphate carboxylase, large subunit, C-terminal
Protein sequence:
MPIGVPKVPFRIPGEEDNRLYRERLLFPGQQVDDEIANQLIGIMMYLNGEDENKDIYPYINSPGGAVIPGISIYDAMQFVVPDVHTICMGLAASMGSSVLTGGEITKRIALPHARVMIHQPASSYYDGQAGECIMEAEEVLKLRDSITNVYVQRTGKPLWVISGDMERDVFMSATEAQAYGIVDLVAVENTEDLL

Annotated regions:
phrase: TICMGLAASMG
type: ACTIVE_SITE
name: ClpP_Ser_AS
description: ClpP, Ser active site

phrase: RIALPHARVMIHQ
type: ACTIVE_SITE
name: ClpP_His_AS
description: ClpP, histidine active site
Protein sequence:
MQVSATHRFARISPQKARLVADLIRGKDVETAVNILAFSDKKASELMSKVLNSAIANAENNEGADIDELKVTEAYVNEGPIMKRMRARAKGRGNRILKRISHITVTVGDK

Annotated regions:
phrase: KRMRARAKGRGNRILKRISHITVT
type: CONSERVED_SITE
name: Ribosomal_uL22_CS
description: Large ribosomal subunit protein uL22, conserved site
Protein sequence:
MLKKAISKLVEGKNLSESEIIEALDCIMEGKATPAQIGSFITALRIKGETIEEITGCAKVMRAKADKICPNVDYYIDTCGTGGDGTNTFNISTATAFVAAAGGVYVAKHGNRSVSSKSGSADVLEALGVNIDLDPVQVKECIEKVGIGFIYAPVFHKSMKHAAGPRKELGIRTIFNILGPLTNPSNAKGQVLGVFNPNLTELMANVLLNLGIERAMVIHGMDGMDEITTTTSTKVSEVRNNEVITYELFPENYGIALASPEDLTGGNAEENAQIIRRIFNGEKGPKRDIVVLNSAAALYVGKVVSSIEEGIGLAEEVIDSGKALQKLDEFVEFTNSFISYNEMSG

Annotated regions:
phrase: KKAISKLVEGKNLSESEIIEALDCIMEGKATPAQIGSFITALRIKGETIEEITGCAKVMRAK
type: DOMAIN
name: Glycosyl_Trfase_fam3_N_dom
description: Glycosyl transferase family 3, N-terminal domain

phrase: YIDTCGTGGDGTNTFNISTATAFVAAAGGVYVAKHGNRSVSSKSGSADVLEALGVNIDLDPVQVKECIEKVGIGFIYAPVFHKSMKHAAGPRKELGIRTIFNILGPLTNPSNAKGQVLGVFNPNLTELMANVLLNLGIERAMVIHGMDGMDEITTTTSTKVSEVRNNEVITYELFPENYGIALASPEDLTGGNAEENAQIIRRIFNGEKGPKRDIVVLNSAAALYVGKVVSSIEEGIGLAEEVIDSGKA
type: DOMAIN
name: Glycosyl_Trfase_fam3
description: Glycosyl transferase, family 3
Protein sequence:
MDDEETAEIDETSSSSTNTNTNATAMATATETAAEMHVELEQDEEIPQGSENGAGTGAGDGTRAEAGASAIHAETTAHVSSRARLENMIEEVDNMFEEVSELMVDVTELMRRANQLREDAGTGAVPQNPTVATNTTPPAEIEEEEEGPEQQAEQALVNNDSPSQASISSRHSGSDMSLDSPGSEDDSDAEAVPRWMIPANRVRSAVDMLVSQARNRDGGIATLLRRENFLQRVRSMVFSQDRIRGRASDDANNADVINTVPDDTSEASPPPPLDVDMEEGVRFDTNLPAEHSYFGTNLNRVPGVDYLEVGSTHRMLIFMHQHILFPGEVLPFMIDGNIIDEEIEDTGRDGVIFGVGFPLMQPPDDNPHKLYGVTCQIYEKGESGRQHVFYKSRALQRIVINCDDIQGPPQYIARNPTMKCYSKVKILPEYFLPEPLKCIDMGSLNRFRDIPSMQEKFRRFQLTTTPWPVEACGEYSFEHIVEKARQKLEIHKIDTMPKCPIQLSFWLVRNLHLTEKMMRLTFLTDSVNIRLQIIGTTLKHESLFYCRYCNSSLAYCSDLFAMSKHGVQTQYCNSAGYIHETNTVYRVIAHAIGYSGEPSTEFSWFPGYQWHIIICKFCAQHVGWEFKAVEPNLAPKVFFGLAGSSVRIGKTSERTPTHGSRFVVRNLLRLVSRELE

Annotated regions:
phrase: LFYCRYCNSSLAYCSDLFAMSKHGVQTQYCNSAGYIHETNTVYRVIAHAIGYSGEPSTEFSWFPGYQWHIIICKFCAQHVGWEFKAVEPNLAPKVFFGLAGSSVRIGKTSERTPT
type: DOMAIN
name: Yippee/Mis18/Cereblon
description: Yippee/Mis18/Cereblon

phrase: RMLIFMHQHILFPGEVLPFMIDGNIIDEEIEDTGRDGVIFGVGFPLMQPPDDNPHKLYGVTCQIYEKGESGRQHVFYKSRALQRIVINCDDIQGPPQYIARNPTMKCYSKVKILPEYFLPEPLKCIDMGSLNRFRDIPSMQEKFRRFQLTTTPWPVEACGEYSFEHIVEKARQKLEIHKIDTMPKCPIQLSFWLVRNLHLTEKMMRLTFLTDSVNIRLQIIGTTLKHE
type: DOMAIN
name: Lon_prtase_N
description: Lon protease, N-terminal domain

phrase: FYCRYCNSSLAYCSDLFAMSKHGVQTQYCNSAGYIHETNTVYRVIAHAIGYSGEPSTEFSWFPGYQWHIIICKFCAQHVGWEFKAVEPNLAPKVFFGLAGSS
type: DOMAIN
name: CULT
description: CULT domain

phrase: ESLFYCRYCNSSLAYCSDLFAMSKHGVQTQYCNSAGYIHETNTVYRVIAHAIGYSGEPSTEFSWFPGYQWHIIICKFCAQHVGWEFKAVEPNLAPKVFFGLAGSSVRIG
type: DOMAIN
name: CULT
description: CULT domain
Protein sequence:
MFISEAIGPEDRFDAVLIGAGIMSSTLAVLLHELDPCMRILIVERLDSPALESTSAFNNSGTGHAANCEFNYTPLQSNGRIEIEKALSINSSFERSLEFWASLAEMGRISPATFLNFLPHISFVWKEADLDFLKQRYLQLSSEVAFQRMEWSDDKAELKEWMPIVMQGRPTSEKVAATRIQRGTDVDFGALTRAYFDSLEESGSVHIRLSTEVIDIQRFGQDPWKLFLKSDLNSYCVEGKFVFLGAGGGALSLLQKSGIPEGKFYGGFPVSGQWLVCNETQVTNNHNAKVYGNADVGSPPMSVPHLDTRWIRGRKSLLFGPFAGFNTKFLKYGSNWDLFRSIQMGNVGAMVQAGLENIDLIKYLYGQLQQDHISRVDSLQNFLPNAKSKDWHLSLAGQRVQIIKKTSKGGKLKMGTEMVSSSDGSLAALLGASPGASTAVAIMIDLLRSSWGEKMSTKIWQDRLRRLIPSFGEDLNSNESMLKATRDRNDSLLGFGEKNQ

Annotated regions:
Protein sequence:
MHVVILGSAAGGGVPQWNCRCSICSLAWAGDSRVRPRTQSSIAVSPDGERWLLLNASPDIRQQIQANPQMHPREGLRHSPIHAVLLTNGDVDHVAGLLTLREGQPFTLYATPGILASVSDNRVFDVMAAEVVKRQTIALNETFEPVPGLSVTLFSVPGKVPLWLEDASMEIGAETETTVGTMIEAGGKRLAYIPGCARVTEDLKARIAGADALLFDGTVLEDDDMIRAGVGTKTGWRMGHIQMNGETGSIASLADVEIGRRVFVHINNTNPVLIEDSSERASVEARGWTVAHDGLTLDL

Annotated regions:
phrase: RWLLLNASPDIRQQIQANPQMHPREGLRHSPIHAVLLTNGDVDHVAGLLTLREGQPFTLYATPGILASVSDNRVFDVMAAEVVKRQTIALNETFEPVPGLSVTLFSVPGKVPLWLEDASMEIGAETETTVGTMIEAGGKRLAYIPGCARVTEDLKARIAGADALLFDGTVLEDDDMIRAGVGTKTGWRMGHIQMNGETGSIASLADVEIGRRVFVH
type: DOMAIN
name: Metallo-B-lactamas
description: Metallo-beta-lactamase
Protein sequence:
MKTVLLTGFDPFGGENINPAWEVAKNLHEKTIGEYKIISKQVPTVFHKSISVLKEYIEELAPEFIICIGQAGGRPDITIERVAINIDDARIADNEGNQPVDVPVVEEGPTAYWSTLPMKAIVKRLQEEGIPASVSQTAGTFVCNHLFYGLMHELEKRDKKIKGGFVHIPFLPEQASKYPGQPSMSLSTIRKGIELAVEVTMTVEVDIVEIGGATH

Annotated regions:
phrase: IPASVSQTAGTFVC
type: ACTIVE_SITE
name: PGPEP1_Cys_AS
description: Pyroglutamyl peptidase I, Cys active site

phrase: GQAGGRPDITIERVAI
type: ACTIVE_SITE
name: PGPEP1_Glu_AS
description: Pyroglutamyl peptidase I, Glu active site
Protein sequence:
MSNTPLPSSFDAHPEFFQETKWQKFTRRIKEEPLIPIGYAATSYALWRAYKSMKAGDSIELNRMFRARIYGHAFTLFAIVAGGIYYGQERRQRKEFEKALQQKQDQEKRDAWLKELEIRDKEDKNWRQRHAAIEMAAKEAEKKRG

Annotated regions:
phrase: EEPLIPIGYAATSYALWRAYKSMKAGDSIELNRMFRARIYGHAFTLFAIVA
type: DOMAIN
name: Hypoxia_induced_domain
description: Hypoxia induced protein, domain

phrase: LPSSFDAHPEFFQETKWQKFTRRIKEEPLIPIGYAATSYALWRAYKSMKAGDSIELNRMFRARIYGHAFTLFAIVAGGIYYGQERRQRKEF
type: DOMAIN
name: Hypoxia_induced_domain
description: Hypoxia induced protein, domain
Protein sequence:
MAKAVGSAGILVKESALLLHPELLSRDFLLLSLERRNIPVEDALNNKEKLTEIFVQHAMPLPQRDLPRNRWGRMMESKRGENKIATVLKSAGTEGGRKRPPIVFDGCSTSTTIKVKRTENGDASQRLNPSPKESTNSTQNSNPAPRLGSPTPNKEAKVATTGNHGQLDSLPVTDSALVSPKSAKLQQSMIINAVKLKRNAPKEEFDVANDTKPTEAKKKIQHVTWP

Annotated regions:
Protein sequence:
MSAPTILIMAGGTGGHIMPGLAVAEVLRERGWRVLWLGNPDKMEGRLVPPRGIELVPLRFQGVRGRGAAALLKLPFLLARACAQAWRRLADIRPDVVLGMGGYVAFPGGVMAALRRMPLVVHEQNAVAGTANRWLARLARRVLSGFPGVLPRGEALGNPVRADLCALPEPAERYAGRSGALRVLVVGGSLGAHALNTTVPQALALLPEQARPQVVHQAGEQHLPALQQAYAQAGVQADCRAFIDDMAGAMAQADLLICRAGAMTVSEVAAAGVAALFVPFPHAIDDHQTANARFLSDAQAAWLQPQATLTPQWLAQWLGQRTRQELQAVAGRARTHALPRAAAHIADVCEQAARRAS

Annotated regions:
phrase: ILIMAGGTGGHIMPGLAVAEVLRERGWRVLWLGNPDKMEGRLVPPRGIELVPLRFQGVRGRGAAALLKLPFLLARACAQAWRRLADIRPDVVLGMGGYVAFPGGVMAALRRMPLVVHEQNAVAGTANRWLARLARRV
type: DOMAIN
name: GlycoTrans_28_N
description: Glycosyltransferase family 28, N-terminal domain

phrase: VLVVGGSLGAHALNTTVPQALALLPEQARPQVVHQAGEQHLPALQQAYAQAGVQADCRAFIDDMAGAMAQADLLICRAGAMTVSEVAAAGVAALFVPFPHAIDDHQTANARFLSDAQAAWLQPQATLTPQWLAQWLGQRTRQEL
type: DOMAIN
name: Glyco_trans_28_C
description: Glycosyl transferase, family 28, C-terminal
Protein sequence:
MAKKSLILLYGGRSAEREVSVLSAESVMRAINYDLFSVKTYFITKEGDFIKTQEFSSKPAEDVRLMTNDTVDMSRKIKPSDIYEEGAVVFPVLHGPMGEDGSIQGFLEVLKMPYVGCNILSSSLAMDKITTKRVLESAGIAQVPYVALVDGEDLEQKIQEIEEKLSYPVFTKPSNMGSSVGISKSDNQEELRASLDLAFKYDSRVLVEQGVTAREIEVGLLGNADVKSSLPGEVVKDVAFYDYQAKYIDNKITMAIPAQLPEGVVNTMRQNAEIAFRAIGGLGLSRCDFFYTEDGQVFLNELNTMPGFTQWSMYPLLWENMGLAYPDLIEKLVALAEEAFAKREAHLL

Annotated regions:
phrase: KRVLESAGIAQVPYVALVDGEDLEQKIQEIEEKLSYPVFTKPSNMGSSVGISKSDNQEELRASLDLAFKYDSRVLVEQGVTAREIEVGLLGNADVKSSLPGEVVKDVAFYDYQAKYIDNKITMAIPAQLPEGVVNTMRQNAEIAFRAIGGLGLSRCDFFYTEDGQVFLNELNTMPGFTQWSMYPLLWENMGLAYPDLIEKLV
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold

phrase: IGGLGLSRCDFFYTEDGQVFLNELNTMP
type: CONSERVED_SITE
name: D-Ala_lig_Van_CS
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site

phrase: HGPMGEDGSIQ
type: CONSERVED_SITE
name: D-Ala_lig_Van_CS
description: D-alanine--D-alanine ligase/VANA/B/C, conserved site

phrase: LILLYGGRSAEREVSVLSAESVMRAINYDLFSVKTYFITKEGDFIKTQEFSSKPAEDVRLMTNDTVDMSRKIKPSDIYEEGAVVFPVLHGPMGEDGSIQGFLEVLKMPYVG
type: DOMAIN
name: Dala_Dala_lig_N
description: D-alanine--D-alanine ligase, N-terminal domain

phrase: LESAGIAQVPYVALVDGEDLEQKIQEIEEKLSYPVFTKPSNMGSSVGISKSDNQEELRASLDLAFKYDSRVLVEQGVTAREIEVGLLGNADVKSSLPGEVVKDVAFYDYQAKYIDNKITMAIPAQLPEGVVNTMRQNAEIAFRAIGGLGLSRCDFFYTEDGQVFLNELNTMPGFTQWSMYPLLWENMGLAYPDLIEKL
type: DOMAIN
name: Dala_Dala_lig_C
description: D-alanine--D-alanine ligase, C-terminal
Protein sequence:
MDFRDWCICVLAAGMGKRMKSSQPKVLLPVLGKPLINYLLQLEIPHFSGKRLAVVSPFAFDQIQSIVDPTVQLVIQEKPLGTAHAVQSILPYLGPEIQKILVIYADMPLLEVHTICQFMTFFEKNHVPLALLSTKSEKPDGFGRIKRDFQGTPLKIIEEKDCSAEEKEILEINLGIYAFQKNEIGIVLQSIQKNNAQGEYYLTDVLEVARKFNYTTLVYTVPWDVQFMNVNSPDDLSTVIGLFRRKKINQLFDLGVKIVDPESVYVDWDVKCGKDVWLFPGTVIEGQSEIGENTKIGPYTHLIHSQIGKDCRIEYSVIENSILEDEVMVGPFTHIRMNSLIRKKARIGNFVEVKKTEIGEGTKALHHSYLGDAQLGKKVNIGAGTITCNFDGYKKHPTIIHDNVFIGSNNSLVAPVIIGEGAYTAAGSTITRNVPSQALGIGRARQVNIDKWVEKKKNRS

Annotated regions:
phrase: CVLAAGMGKRMKSSQPKVLLPVLGKPLINYLLQLEIPHFSGKRLAVVSPFAFDQIQSIVDPTVQLVIQEKPLGTAHAVQSILPYLGPEIQKILVIYADMPLLEVHTICQFMTFFEKNHVPLALLSTKSE
type: DOMAIN
name: MobA-like_NTP_Trfase
description: MobA-like NTP transferase

phrase: GVKIVDPESVYVDWDVKCGKDVWLFPGTVIEGQSEIGENTKIGPYTHLIHSQIGKDCRIEYSVIENSILEDEVMVGPFTHIRMNSLIRKKARIGNFVEVKKTEIGEGTKALHHSYLGDAQLGKKVNIGAGTITCNFDGYKKHPTIIHDNVFIGSNNSLVAPVIIGEGAYTAAGSTITRNVPSQALGIGRAR
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain

phrase: PTIIHDNVFIGSNNSLVAPVIIGEGAYTAAGSTIT
type: REPEAT
name: Hexapep
description: Hexapeptide repeat

phrase: DVKCGKDVWLFPGTVIEGQSEIGENTKIGPYTH
type: REPEAT
name: Hexapep
description: Hexapeptide repeat
Protein sequence:
MIREERLLKVILGPHISEKSTVLAEKNNTVVFRVAIDATKAEIKAAVAKLFEVEVDSVRTLVNKGKTKRTGGRVGRRIDWKKAYVTLAAGAEIDFVGGAE

Annotated regions:
phrase: KKAYVTLAAGAEIDF
type: CONSERVED_SITE
name: Ribosomal_uL23_CS
description: Large ribosomal subunit protein uL23, conserved site
Protein sequence:
MAQVINTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAHTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDNTLTIQVGANDGETIDIDLKQINSQTLGLDSLNVQKAYDVSATDVISSTYSDGTQALTAPTATDIKAALGNPTVTGDTLTAAVSFKDGKYYATVSGYTDAGDTAKNGKYEVTVDSATGAVSFGATPTKSTVTGDTAVTKVQVNAPVAADAATKKALQDGGVSSADASAATLVKMSYTDKNGKTIEGGYALKAGDKYYAADYDEATGAIKAKTTSYTAADGTTKTAANQLGGVDGKTEVVTIDGKTYNASKAAGHDFKAQPELAEAAAKTTENPLQKIDAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSLLR

Annotated regions:
phrase: RINSAKDDAAGQAIANR
type: DOMAIN
name: Flagellin_N
description: Flagellin, N-terminal domain

phrase: HTTEGALNEINNNLQRVRE
type: DOMAIN
name: Flagellin_N
description: Flagellin, N-terminal domain

phrase: SIQAEITQRLNEIDRVSGQTQFN
type: DOMAIN
name: Flagellin_N
description: Flagellin, N-terminal domain

phrase: TQALTAPTATDIKAALGNPTVTGDTLTAAVSFKDGKYYATVSGYTDAGDTAKNGKYEVTVDSATGAVSFGATPTKSTVTGDTAVTKV
type: DOMAIN
name: Flagellin_D3
description: Flagellin D3

phrase: LQKIDAALAQVDALRSDLGAVQNRFNSAITNLGNTVNNLSEARSRIEDSDYATEVSNMSRAQILQQAGTSVLAQANQVPQNVLSL
type: DOMAIN
name: Flagellin_C
description: Flagellin, C-terminal domain

phrase: TTSYTAADGTTKTAANQLGGVDGKTEVVTIDGKTYNASKAAGH
type: DOMAIN
name: FLIC_barrel
description: Flagellin, barrel domain

phrase: INTNSLSLLTQNNLNKSQSALGTAIERLSSGLRINSAKDDAAGQAIANRFTANIKGLTQASRNANDGISIAHTTEGALNEINNNLQRVRELAVQSANSTNSQSDLDSIQAEITQRLNEIDRVSGQTQFNGVKVLAQDN
type: DOMAIN
name: Flagellin_N
description: Flagellin, N-terminal domain
Protein sequence:
MSQPTVYIDGDQGTTGLLIHERLRGRIDLQLVTLPDAERKDPVRRAEAINAADIAILCLPDAAAREAVGFIRNPAVRVIDASSAHRTQPDWVYGFPEMANGHAQTIAHARRVTNPGCYPTGAIALLRPLQQAGLLPRDYPVSIHAVSGYSGGGRAAVDAFESGDASQAKPLQVYGLALAHKHVPEIQLHAGLTNRPMFVPAYGAYRQGIVLTVPIELRLLPAGVTGEQLHACLAHHYADARHVDVTPLADTQAITHLDPQALNGTNDMRLGVFVNAEHGQVLLSAVFDNLGKGASGAAVQNLDLMLGAADVAKAA

Annotated regions:
phrase: TVYIDGDQGTTGLLIHERLRGRIDLQLVTLPDAERKDPVRRAEAINAADIAILCLPDAAAREAVGFIRNPAVRVIDASSAHRTQPDWVYGFPEMANGHAQT
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: RAEAINAADIAILCLPDAAAREAVGFIRNPAVRVIDASSAHRTQPDWVYGFPEMANG
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MLSDFFNNLASFFSNIFSLFEGKKQTRILMIGLDGAGKSTLLYKLKLGDIVSTVPTIGFNVETIEYKNLSMTVWDVGGQYKIRALWKHYYHGTNAIIFVVDSTDRERMDEVKEEIDTLLIQEELKGIQILIFANKQDMNNAMNTSEIVDSLNLNSIKDRKWYVQPCSAIKSPHGIYEGFDWVANSLNNK

Annotated regions:
phrase: KQTRILMIGLDGAGKSTLLYKLKLGDIVSTVPTIGFNVETIEYKNLSMTVWDVGGQYKIRALWKHYYHGTNAIIFVVDSTDRERMDEVKEEIDTLLIQEELKGIQILIFANKQDMNNAMNTSEIVDSLNL
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain
Protein sequence:
MDQSNRYARLDLKEADLIAGGRHVLCAYIMKPKAGYGYLETAAHFAAESSTGTNVEVSTTDDFTRGVDALVYEIDPEKEIMKIAYPVELFDRNIIDGGAMLCSFLTLTIGNNQGMGDVEYAKMHDFYVPPCYLRLFDGPSMNIADMWRVLGRPVVDGGMVVGTIIKPKLGLRPKPFADACYEFWLGGDFIKNDEPQGNQTFAPLKETIRLVADAMKRAQDETGEAKLFSANITADDHYEMVARGEYILETFGENADHVAFLVDGYVTGPAAITTARRSFPRQFLHYHRAGHGAVTSPQSMRGYTAFVLSKMSRLQGASGIHTGTMGYGKMEGDASDKIMAYMLNDEAAQGPFYHQDWLGMKATTPIISGGMNALRLPGFFDNLGHSNVIQTSGGGAFGHLDGATAGAKSLRQSCDAWKAGVDLVTYAKSHRELARAFESFPNDADKLYPGWRVALGVN

Annotated regions:
phrase: LKEADLIAGGRHVLCAYIMKPKAGYGYLETAAHFAAESSTGTNVEVSTTDDFTRGVDALVYEIDPEKEIMKIAYPVELFDRNIIDGGAMLCSFLTLTIGNNQGMGDVEYAKMHDFYVPPC
type: DOMAIN
name: RuBisCO_lsu_fd_N
description: Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal

phrase: NIADMWRVLGRPVVDGGMVVGTIIKPKLGLRPKPFADACYEFWLGGDFIKNDEPQGNQTFAPLKETIRLVADAMKRAQDETGEAKLFSANITADDHYEMVARGEYILETFGENADHVAFLVDGYVTGPAAITTARRSFPRQFLHYHRAGHGAVTSPQSMRGYTAFVLSKMSRLQGASGIHTGTMGYGKMEGDASDKIMAYMLNDEAAQGPFYHQDWLGMKATTPIISGGMNALRLPGFFDNLGHSNVIQTSGGGAFGHLDGATAGAKSLRQSCDAWKAGVDLVTYAKSHRELARAFES
type: DOMAIN
name: RuBisCO_lsu_C
description: Ribulose bisphosphate carboxylase, large subunit, C-terminal

phrase: GGDFIKND
type: ACTIVE_SITE
name: RuBisCo_large_chain_AS
description: Ribulose bisphosphate carboxylase, large chain, active site
Protein sequence:
MTIRRLDPVLIDRIAAGEVIERPAAAVKELVENALDAQASEIDVVLEGGGKTLIRVTDNGCGMSAEDLELSVERHATSKLPDGDLFAIATLGFRGEALPSIGSVSVLSLTSRMETATHGVALSVEHGRKQTVIPCGQPRGTRIEVRELFRTTPARLKFLKGDRAEARAAADAVQRLAMAHPTRRFTFTSTDTAGFDYLPCAEGPEGLLARIGAVLGKDFEANALPVEAEREGIILEGFIGLPTWHRANGLAQYLFVNGRPVRDKLLTGAVRAAYMDYLPAGRYPALALFLRCDPQEVDVNVHPAKAEVRFRDQGLVRGLLVGALKQTLQQAMHRATPDGGRVALGLLAMHSAGQGQRPVSSASMPSASRQAPTMPPRDWIKEGVQDWDWRQSPARPQNPPQNPPPGDRIEMSGSLPLGFAETPAGLNGDSGKELSEAASETPHDEPLGFARAQLHETYIVAQTRDGFVLVDQHAAHERLVYERLKQARAAQTVERQILLLPTIVELPEADVERLVDAASMLADFGLVVESFGPGALAVREIPIVLKDGSVPALIHDLANQLQEDDKALIPLERKLDHVLATFACHHSVRAGRRLGIEEMNALLREMERTPGSGQCNHGRPTYIELKLGDIERLFGRG

Annotated regions:
phrase: AQLHETYIVAQTRDGFVLVDQHAAHERLVYERLKQARAAQTVERQILLLPTIVELPEADVERLVDAASMLADFGLVVESFGPGALAVREIPIVLKDGSVPALIHDLANQLQEDDKALIPLERKLDHVLATFACHHSVRAGRR
type: DOMAIN
name: MutL_C
description: MutL, C-terminal, dimerisation

phrase: GFRGEA
type: CONSERVED_SITE
name: DNA_mismatch_repair_CS
description: DNA mismatch repair, conserved site

phrase: IGAVLGKDFEANALPVEAEREGIILEGFIGLPTWHRANGLAQYLFVNGRPVRDKLLTGAVRAAYMDYLPAGRYPALALFLRCDPQEVDVNVHPAKAEVRFRDQGLVRGLLVGALKQTL
type: DOMAIN
name: DNA_mismatch_S5_2-like
description: DNA mismatch repair protein, S5 domain 2-like

phrase: ARAQLHETYIVAQTRDGFVLVDQHAAHERLVYERLKQARAAQTVERQILLLPTIVELPEADVERLVDAASMLADFGLVVESFGPGALAVREIPIVLKDGSVPALIHDLANQLQEDDKALIPLERKLDHVLATFACHHSVRAGRR
type: DOMAIN
name: MutL_C
description: MutL, C-terminal, dimerisation

phrase: GAVLGKDFEANALPVEAEREGIILEGFIGLPTWHRANGLAQYLFVNGRPVRDKLLTGAVRAAYMDYLPAGRYPALALFLRCDPQEVDVNVHPAKAEVRFRDQGLVRGLLVGALKQT
type: DOMAIN
name: DNA_mismatch_S5_2-like
description: DNA mismatch repair protein, S5 domain 2-like
Protein sequence:
MDGLRTDGGAAGAAPASSSSSSSVAAAAPGQCRGFLSAPVFAGTHSGRAAAAAAAAAAAAAAASGFAYPGTSERAGSASSSSSSAVVAARPEAPSAKECPAPGTAATAPPGAPALGYGYHFGNGYYSCRMSHGVGLQQNALKSSPHSSLGGFPVEKYMDVSGLASSSVPANEVPARAKEVSFYQGYTSPYQHVPGYIDMVSTFGSGEPRHEAYISMEGYQSWTLANGWNSQVYCAKDQPQGSHFWKSSFPGDVALNQPDMCVYRRGRKKRVPYTKLQLKELENEYAINKFINKDKRRRISAATNLSERQVTIWFQNRRVKDKKIVSKLKDTVS

Annotated regions:
phrase: APSAKECPAPGTAATAPPGAPALGYGYHFGNGYYSCRMSHGVGLQQNALKSSPHSSLGGFPVEKYMDVSG
type: DOMAIN
name: HoxA13_N
description: Homeobox protein Hox1A3 N-terminal

phrase: RKKRVPYTKLQLKELENEYAINKFINKDKRRRISAATNLSERQVTIWFQNRRVKDK
type: DOMAIN
name: HD
description: Homeodomain

phrase: RKKRVPYTKLQLKELENEYAINKFINKDKRRRISAATNLSERQVTIWFQNRRVKDK
type: DOMAIN
name: HD
description: Homeodomain

phrase: RRGRKKRVPYTKLQLKELENEYAINKFINKDKRRRISAATNLSERQVTIWFQNRRVKDKK
type: DOMAIN
name: HD
description: Homeodomain

phrase: GRKKRVPYTKLQLKELENEYAINKFINKDKRRRISAATNLSERQVTIWFQNRRVKDKKIVSK
type: DOMAIN
name: HD
description: Homeodomain

phrase: ISAATNLSERQVTIWFQNRRVKD
type: CONSERVED_SITE
name: Homeobox_CS
description: Homeobox, conserved site
Protein sequence:
MSGAVGLVVKRRSGIAEDVARLVVKELVESGVEVLVDETVDYPSLSGFPRFSISRDPPGRVVVVGGDGTLLRTFLRLGERESPLFMTIKAGKKGFLLDVERYEAVERLRDFLEGRFREVVYPRYRVYLEGEARACMFNDTAVTANNAKMARVHVFVDGDLAMNIDGDGVVVSTTAGSTAYSLSGGGPIIDPRLDVIVLTPLNPVQLFLRSIVVPSGSRVTVEASVYSNPLVVNIDGQYVYELEPGGIVDIERCGSGVRIARFRWWEDYYERLYTRLLAYW

Annotated regions:
Protein sequence:
MTLRRLRKLQQKEEAAATPDPAARTPDSEVAPAAPVPTPGPPAAAATPGPPADELYAALEDYHPAELYRALAVSGGTLPRRKGSGFRWKNLSQSPEQQRKVLTLEKEDNQTFGFEIQTYGLHHREEQRVEMVTFVCRVHESSPAQLAGLTPGDTIASVNGLNVEGIRHREIVDIIKASGNVLRLETLYGTSIRKAELEARLQYLKQTLYEKWGEYRSLMVQEQRLVHGLVVKDPSIYDTLESVRSCLYGAGLLPGSLPFGPLLAVPGRPRGGARRARGDADDAVYHTCFFGDSEPPALPPPPPPARAFGPGPAETPAVGPGPGPRAALSRSASVRCAGPGGGGGGGAPGALWTEAREQALCGPGLRKTKYRSFRRRLLKFIPGLNRSLEEEESQL

Annotated regions:
phrase: LTLEKEDNQTFGFEIQTYGLHHREEQRVEMVTFVCRVHESSPAQLAGLTPGDTIASVNGLNVEGIRHREIVDIIKASGNVLRL
type: DOMAIN
name: PDZ
description: PDZ domain

phrase: QTFGFEIQTYGLHHREEQRVEMVTFVCRVHESSPAQLAGLTPGDTIASVNGLNVEGIRHREIVDIIKASGNVLRLETLYG
type: DOMAIN
name: PDZ
description: PDZ domain

phrase: VLTLEKEDNQTFGFEIQTYGLHHREEQRVEMVTFVCRVHESSPAQLAGLTPGDTIASVNGLNVEGIRHREIVDIIKASGNVLRLETLYG
type: DOMAIN
name: PDZ
description: PDZ domain
Protein sequence:
MGSMNKEQAFELLDAFYEAGGNCIDTANSYQNEESEIWIGEWMKSRKLRDQIVIATKFTGDYKKYEVGGGKSANYCGNHKHSLHVSVRDSLRKLQTDWIDILYVHWWDYMSSIEEVMDSLHILVQQGKVLYLGVSDTPAWVVSAANYYATSHGKTPFSIYQGKWNVLNRDFERDIIPMARHFGMALAPWDVMGGGRFQSKKAMEERKKNGEGLRTVSGTSKQTDKEVKISEALAKVAEEHGTESVTAIAIAYVRSKAKNVFPLVGGRKIEHLKQNIEALSIKLTPEQIEYLESIIPFDVGFPTNFIGDDPAVTKKASLLTAMSAQISFD

Annotated regions:
phrase: SMNKEQAFELLDAFYEAGGNCIDTANSYQNEESEIWIGEWMKSRKLRDQIVIATKFTGDYKKYEVGGGKSANYCGNHKHSLHVSVRDSLRKLQTDWIDILYVHWWDYMSSIEEVMDSLHILVQQGKVLYLGVSDTPAWVVSAANYYATSHGKTPFSIYQGKWNVLNRDFERDIIPMARHFGMALAPWDVMGGGRFQSKKAMEERKKNGEGLRTVSGTSKQTDKEVKISEALAKVAEEHGTESVTAIAIAYVRSKAKNVFPLVGGRKIEHLKQNIEALSIKLTPEQIEYLESI
type: DOMAIN
name: NADP_OxRdtase_dom
description: NADP-dependent oxidoreductase domain