nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MCVKKIRKASIWATGSYLPEKILSNSDLEQMVDTSDEWIVTRTGIKERRIAAPGEYASIMGAKAAEKAIEKAGLTKDQIECIIFSTSAPDYIFPSSAALAQAYLGIKEVPAFDCMAACTGYLYGLSVAKALVESGAYNNVLLIAADKLSSFVNYEDRNTCVLFGDGGSACVVGESRPGALEITNVNLGADGSVADLLSLPAGGSRLPASPETVAEGKHFIYMEGKEVFKHAVRRMESAAKICIAEAGLAEGDIDWLVPHQANERIIDAIAKRFEIDESKVFKTLSKYGNTAASSVCIALDELLQLHVINSGEYLLLVAFGGGLSWGAVVLRQVEG

Annotated regions:
phrase: AEAGLAEGDIDWLVPHQANERIIDAIAKRFEIDESKVFKTLSKYGNTAASSVCIALDELLQLHVINSGEYLLLVAFGGGLSWGAVVL
type: DOMAIN
name: ACP_syn_III_C
description: Beta-ketoacyl-[acyl-carrier-protein] synthase III, C-terminal

phrase: FDCMAACTGYLYGLSVAKALVESGAYNNVLLIAADKLSSFVNYEDRNTCVLFGDGGSACVVGESRPGALEITNVNLGAD
type: DOMAIN
name: ACP_syn_III_N
description: Beta-ketoacyl-[acyl-carrier-protein] synthase III, N-terminal
Protein sequence:
MNILLANPRGFCAGVDRAISIVELALEIHGAPIYVRHEVVHNRFVVDGLKAKGAVFVEELDEVPDDAIVIFSAHGVSQEVRQEAKRRGLKVFDATCPLVTKVHMQVARASKKGTKAILIGHEGHPEVIGTMGQYDNQDAGIFLVESVEDIAKLPVSSQDDLTFMTQTTLSIDDTSDVIEALKEKYPAIQGPRKNDICYATTNRQQAVRELAKQSQLVLVVGSKNSSNSNRLAELASRMGVPSKLIDGPQDIDPSWLDGVETIGITAGASAPEVLVQSVVEHLKTLGVTGVSNLEGCEENMVFEVPKELRIHEVK

Annotated regions:
Protein sequence:
MLVNVARFQAALRHCWPALSMPDIGTDGQVRLVLDSRRLVPGDVFLAVPGVTTDGRDFLSEALEAGAAWVLYHLESSETLPASIRDTRVIGLPFLRQRLGELGRGLFAVPDDLELIGVTGTNGKSSVTHYIAELSTLLGHEAGLVGTLGHGRPGMLAEAGLTTPGPLALQAALGEMGRKGVERVAMEVSSHALEQGRLDGCRVRAAVFTNLSRDHLDYHGSMAAYAAAKARLFRRPELSLAVVNANDSLARLMLAGLAPNVRVLAVGEDSAATLRVVDWRPSETGQLALVATPDGEMPLELPLMGRFNLENVLLAIATLYGLGESRAALFEAAQRLSPVPGRMQAVRRGNCPTVIIDYAHTPGALENALIALRAHLPGDGRLWCLFGCGGDRDDGKRPLMAAVAERHADRLVITDDNPRSEDPAAIREQILCGLSPQAREGAWTIAGRGDAIARVLAEASANDVVLLAGKGHETYQEIDGARHPFCDTRQAEAALARRESAGHG

Annotated regions:
phrase: GRMQAVRRGNCPTVIIDYAHTPGALENALIALRAHLPGDGRLWCLFGCGGDRDDGKRPLMAAVAERHADRLVITDDNPRSEDPAAIREQILCGLSPQAREGAWTIAGRGDAIARVLAEASANDVVLLAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: VTGTNGKSSVTHYIAELSTLLGHEAGLVGTLGHGRPGMLAEAGLTTPGPLALQAALGEMGRKGVERVAMEVSSHALEQGRLDGCRVRAAVFTNLSRDHLDYHGSMAAYAAAKARLFRRPELSLAVVNANDSLARLMLAGLAPNVRVLAVGEDSAATLRVVDWRPSETGQLALVATPDGEMPLELPLMGRFNLENVLLAIA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: LDSRRLVPGDVFLAVPGVTTDGRDFLSEALEAGAAWVLYHLESSETLPASIRDTRVIGLPFLRQRLGE
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain
Protein sequence:
MSQVIATYLIHDEKDLEKKAEGIALGLTVGSWTDLPLLEQEQLRKHKGVVVSVQELEENERANRYFGKRLKRGIVRIAYPSLNFSADIPALLTTVFGKLSLDGEVRLLDLTFSDEWKRKFPGPRFGIDEIRKKLDVYERPLLMSIFKGMIGRDLTYLSEQLKQQALGGVDLVKDDEILFENELTPFEKRITAGKAVLNEVYEKTGKRTLYAVNLTGKTFELKEKAKRAVELGADVLLFNVFAYGLDVLQGLREDDEITIPIMAHPAFSGALTPSEFYGIKASLLLGKLLRLVGADFVLFPSPYGSVALDKEEALGIAAELTNDKEPFKRSFPVPSAGIHPGLVPLLFRDFGIDSIVNAGGGIHGHPDGAAGGGRAFRAAIDAALAGKSLHEAARENEALRKAIDLWGAVEVTS

Annotated regions:
phrase: QVIATYLIHDEKDLEKKAEGIALGLTVGSWTDLPLLEQEQLRKHKGVVVSVQELEENERANRYFGKRLKRGIVRIAYPSLNFSADIPALLTTVFGKL
type: DOMAIN
name: RuBisCO_lsu_fd_N
description: Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal

phrase: GIDEIRKKLDVYERPLLMSIFKGMIGRDLTYLSEQLKQQALGGVDLVKDDEILFENELTPFEKRITAGKAVLNEVYEKTGKRTLYAVNLTGKTFELKEKAKRAVELGADVLLFNVFAYGLDVLQGLREDDEITIPIMAHPAFSGALTPSEFYGIKASLLLGKLLRLVGADFVLFPSPYGSVALDKEEALGIAAELTNDKEPFKRSFPVPSAGIHPGLVPLLFRDFGIDSIVNAGGGIHGHPDGAAGGGRAFRAAIDAALAGKSLHEAARENEALRKAIDL
type: DOMAIN
name: RuBisCO_lsu_C
description: Ribulose bisphosphate carboxylase, large subunit, C-terminal
Protein sequence:
GIFSSRKCKTPSKTFKGICTRDSNCDTSCRYEGYPAGDCKGIRRRCMCSKPC

Annotated regions:
phrase: KCKTPSKTFKGICTRDSNCDTSCRYEGYPAGDCKGIRRRCMCSKP
type: DOMAIN
name: Scorpion_toxin-like
description: Knottin, scorpion toxin-like
Protein sequence:
MYPAKPAASSSQPAAEMAQPVVGIPISSPGAVAVGPVVGKWSSGLCACSDDCGLCCLTCWCPCITFGRIAEIVDRGATSCGVAGTIYTLLACFTGCHWIYSCTYRSRMRAQLGLPEACCCDCCVHFCCEPCALSQQYRELKARGFDPDLGWDVNAQKAAAAAAMYPPPAEGMMIR

Annotated regions:
Protein sequence:
MSVQTLTLPSPAKLNLMLHILGRREDGYHELQTLFQFLDYGDELTFAVRDDGVIQLHTEFEGVPHDSNLIVKAAKKLQAQSSCPLGIDIWIDKILPMGGGIGGGSSNAATTLLGLNHLWRLGWDDDRLAALGLTLGADVPVFVRGHAAFAEGVGEKLTPEYPEEPWYVVLVPQVSVSTAEIFSDPLLTRNSPPIKVRPVPKGNSRNDCLPVVARRYPEVRNALNLLGKFTEAKLTGTGSCVFGGFPSKAEADKVSALLTETLTGFVAKGSNVSMLHRKLQSLL

Annotated regions:
phrase: CLPVVARRYPEVRNALNLLGKFTEAKLTGTGSCVFGGFPSKAEADKVS
type: DOMAIN
name: GHMP_kinase_C_dom
description: GHMP kinase, C-terminal domain

phrase: NLIVKAAKKLQAQSSCPLGIDIWIDKILPMGGGIGGGSSNAATTLLGLNHLWRLGWDDDRLAALGLTLGADVPVFVR
type: DOMAIN
name: GHMP_kinase_N_dom
description: GHMP kinase N-terminal domain
Protein sequence:
MMLAQQWRDARPKVAGLHLDSGACSRQSFAVIDATTAHARHEAEVGGYVAAEAATPALDAGRAAVASLIGFAASDVVYTSGSNHAIDLLLSSWPGKRTLACLPGEYGPNLSAMAANGFQVRALPVDDDGRVLVDEASHELSAHPVALVHLTALASHRGIAQPAAELVEACHNAGIPVVIDAAQALGHLDCNVGADAVYSSSRKWLAGPRGVGVLAVRPELAERLQPRIPPSDWPIPMSVLEKLELGEHNAAARVGFSVAVGEHLAAGPTAVRERLAEVGRLSRQVLAEVDGWRVVEPVDQPTAITTLESTDGADPASVRSWLIAERGIVTTACELARAPFEMRTPVLRISPHVDVTVDELEQFAAALREAP

Annotated regions:
phrase: LDSGACSRQSFAVIDATTAHARHEAEVGGYVAAEAATPALDAGRAAVASLIGFAASDVVYTSGSNHAIDLLLSSWPGKRTLACLPGEYGPNLSAMAANGFQVRALPVDDDGRVLVDEASHELSAHPVALVHLTALASHRGIAQPAAELVEACHNAGIPVVIDAAQALGHLDCNVGADAVYSSSRKWLAGPRGVGVLAVRPELAERLQPRIPPSDWPIPMSVLEKLELGEHNAAARVGFSVAVGEHLAAGPTAVRERLAEVGRLSRQVLAEVDGWRVVEPVDQPTAITTLESTDGADPASVRSWLIAERGIVTTACELARAPFEMRTPVLRISPHVDVTVDELEQ
type: DOMAIN
name: Aminotrans_V_dom
description: Aminotransferase class V domain
Protein sequence:
MSEVDTIAKQNITRMNKLQKRLRHEVGSAIADYNMIEDGDRVMCCLSGGKDSYTMLDILLTLQQRAPIKFEIVAVNLDQKQPGFPEHVLPAYLDKLGVAYHILEKDTYSIVKEKIPEGKTTCSLCSRLRRGTLYGFAQHIGATKIALGHHRDDIIETMFLNMFYAGKQKAMPPKLLSDDGANMVIRPLAYCREKDIEEYSTLKSFPIIPCNLCGSQENLKRGAVKDMLQMWDKQHPGRIETIFTAMQNTSPSQGVDRENFDFISLKRNPDAVNTGDVADADLPAFDFVDISNNGHINLDISNRIDVVATFKP

Annotated regions:
phrase: VMCCLSGGKDSYTMLDILLTLQQRAPIKFEIVAVNLDQKQPGFPEHVLPAYLDKLGVAYHILEKDTYSIVKEKIPEGKTTCSLCSRLRRGTLYGFAQHIGATKIALGHHRDDIIETMFLNMFYAGKQKAMPPKLLSDDGANMVIRPLAYCREKDIEEYST
type: DOMAIN
name: TilS/TtcA_N
description: tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal
Protein sequence:
MSKMRVYEYAKKHNVSSKDVIHKLKEMNIDVSNHMTMIEADVVEQLDRSFSKEQKQELKKEEKKAPVKTPVLEQFEEDEDEVIQTKVPIKKAVVKNREGKKHDLQIQQKEKKIFNNKKNKKQKPQQAPQQEVQKKKEKELPKKITFEGSLTVAELAKKLGKEPSEIIKKLFMLGIIATINKDLDKDAIELICSDYGVEVEEKVTIDETEFETIEIVDNPEDLVERPPVVTIMGHVDHGKTTLLDSIRQTKVTEQEAGGITQHIGAYQVVVNGKKITFLDTPGHEAFTTMRARGAQVTDIVILVVAADDGVMPQTVEAINHAKAAKVPIIVAVNKIDKPTANPDRVMQELMEYELVPEEWGGDTIYCKLSALTGEGIDNLLEMILLVSEMEELKANPNRRATGTVIEAKLDKGRGPVATLLVQSGTLRVGDPIVVGYTYGRVRAMTNDLGRRVKEAGPSTPVEITGLNEVPQAGDRFMVFEDEKKARQIGEARAQKQIVQQRSVKARVSLDDLFEKIKQGEMKELNIIVKADVQGSVEALVAALQKIEVEGVRVKIIHSGVGAVTEYDIMLASASNAIVIGFNVRPDANAKRVAEAEKVDIRLHRIIYKVIEEIEAAMKGMLDPEYEEKVIGQAEVRQTFKVSKVGTIAGCYVTDGKITRDSSVRLIRQGIVVYEGQIDTLKRYKDDVKEVAQGYECGITIKNFNDIKEGDVIEAYVMQEVARK

Annotated regions:
phrase: PPVVTIMGHVDHGKTTLLDSIRQTKVTEQEAGGITQHIGAYQVVVNGKKITFLDTPGHEAFTTMRARGAQVTDIVILVVAADDGVMPQTVEAINHAKAAKVPIIVAVNKIDKPTANPDRVMQELMEYELVPEEWGGDTIYCKLSALTGEGIDNLLEM
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: VVTIMGHVDHGKTTLLDSIRQTKVTEQEAGGITQHIGAYQVVVNGKKITFLDTPGHEAFTTMRARGAQVTDIVILVVAADDGVMPQTVEAINHAKAAKVPIIVAVNKIDKPTANPDRVMQELMEYELVPEEWGGDTIYCKLSALTGEGIDNLLEMI
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: RATGTVIEAKLDKGRGPVATLLVQSGTLRVGDPIVVGYTYGRVRAMTNDLGRRVKEAGPSTPVEITGLNEVPQAGDRFMVFEDEKKARQIGEARA
type: DOMAIN
name: IF2_II
description: Translation initiation factor IF-2, domain II

phrase: LTVAELAKKLGKEPSEIIKKLFMLGIIATINKDLDKDAIELICSDYGV
type: DOMAIN
name: IF2_N
description: Translation initiation factor IF-2, N-terminal

phrase: MSKMRVYEYAKKHNVSSKDVIHKLKEMNIDVSNHMTMIEADVVEQLDRSF
type: DOMAIN
name: IF2_N
description: Translation initiation factor IF-2, N-terminal

phrase: ERPPVVTIMGHVDHGKTTLLDSIRQTKVTEQEAGGITQHIGAYQVVVNGKKITFLDTPGHEAFTTMRARGAQVTDIVILVVAADDGVMPQTVEAINHAKAAKVPIIVAVNKIDKPTANPDRVMQELMEYELVPEEWGGDTIYCKLSALTGEGIDNLLEMILLVSEMEEL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: ATGTVIEAKLDKGRGPVATLLVQSGTLRVGDPIVVGYTYGRVRAMTNDLGRRVKEAGPSTPVEITGLNEVPQAGDRFM
type: DOMAIN
name: EF-G-like_DII
description: Elongation factor G-like, domain II

phrase: QRSVKARVSLDDLFEKIKQGEMKELNIIVKADVQGSVEALVAALQKIEVEGVRVKIIHSGVGAVTEYDIMLASASNAIVIGFNVRPDANAKRVAEAEKVDIRLHRIIYKVIEEI
type: DOMAIN
name: TIF_IF2_dom3
description: Translation initiation factor IF- 2, domain 3
Protein sequence:
MAEYLRLPHSLAMIRLCNPPVNAISPTVITEVRNGLQKASLDHTVRAIVICGANDNFCAGADIHGFKSPTGLTLGSLVDEIQRYQKPVVAAIQGVALGGGLELALGCHYRIANAKARVGFPEVMLGILPGARGTQLLPRVVGVPVALDLITSGRHISTDEALKLGILDVVVKSDPVEEAIKFAQTVIGKPIEPRRILNKPVPSLPNMDSVFAEAIAKVRKQYPGRLAPETCVRSVQASVKHPYEVAIKEEAKLFMYLRGSGQARALQYAFFAEKSANKWSTPSGASWKTASAQPVSSVGVLGLGTMGRGIAISFARVGIPVVAVESDPKQLDTAKKIITSTLEKEASKSGQASAKPNLRFSSSTKELSSVDLVIEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALDVDDIASSTDRPQLVIGTHFFSPAHIMRLLEVIPSRYSSPTTIATVMSLSKRIGKIGVVVGNCYGFVGNRMLAPYYNQGYFLIEEGSKPEDVDGVLEEFGFRMGPFRVSDLAGLDVGWKVRKGQGLTGPSLPPGTPTRKRGNTRYSPIADMLCEAGRFGQKTGKGWYQYDKPLGRIHKPDPWLSEFLSQYRETHHIKQRSISKEEILERCLYSLINEAFRILEEGMAASPEHIDVIYLHGYGWPRHVGGPMYYAASVGLPTVLEKLQKYYRQNPDIPQLEPSDYLRRLVAQGSPPLKEWQSLAGPHSSKL

Annotated regions:
phrase: NCYGFVGNRMLAPYYNQGYFLIEE
type: CONSERVED_SITE
name: 3-OHacyl-CoA_DH_CS
description: 3-hydroxyacyl-CoA dehydrogenase, conserved site

phrase: ILERCLYSLINEAFRILEEGMAASPEHIDVIYLHGYGWPRHVGGPMYYAASVGLPTVLEKLQKYYRQNPDIPQLEPSDYLRRLVAQGSPPL
type: DOMAIN
name: 3HC_DH_C
description: 3-hydroxyacyl-CoA dehydrogenase, C-terminal

phrase: GFVGNRMLAPYYNQGYFLIEEGSKPEDVDGVLEEFGFRMGPFRVSDLAGLDVGWKVRKGQGLTGPSLPPGTPTRKRGNTRYSPIADMLCEAGRFGQKTGKGWYQ
type: DOMAIN
name: 3HC_DH_C
description: 3-hydroxyacyl-CoA dehydrogenase, C-terminal

phrase: VGVLGLGTMGRGIAISFARVGIPVVAVESDPKQLDTAKKIITSTLEKEASKSGQASAKPNLRFSSSTKELSSVDLVIEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSALDVDDIASSTDRPQLVIGTHFFSPAHIMRLLEVIPSRYSSPTTIATVMSLSKRIGKIGVVVG
type: DOMAIN
name: 3-OHacyl-CoA_DH_NAD-bd
description: 3-hydroxyacyl-CoA dehydrogenase, NAD binding

phrase: VAAIQGVALGGGLELALGCH
type: CONSERVED_SITE
name: Enoyl-CoA_hyd/isom_CS
description: Enoyl-CoA hydratase/isomerase, conserved site
Protein sequence:
MFEVNPVKFKIKELAERTQLLRGIFDYDAKNERLEEVTRELESSEVWNDPERAQALGKERASLEAVVKTIDDMDSGLEDVEGLLELAIEEEDEDTFNETSKELDYLESRLADLEFRRMFSGPQDASNCYLDIQSGSGGTEAQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHRLVRKSPFDSSGRRHTSFCSVFVYPEIDDDITIDINPSDLRIDTYRASGAGGQHVNKTESAIRITHLPTNTVVQCQNDRSQHKNKDAAMKQLKAKLFELEMLKQNADKQAAEDAKSDIGWGSQIRSYVLDDARIKDLRTGVETRNTQAVLDGDLDKFIEASLKSGL

Annotated regions:
phrase: NERLEEVTRELESSEVWNDPERAQALGKERASLEAVVKTIDDMDSGLEDVEGLLELAIEEEDEDTFNETSKELDYLESRLADLEFRRMFSGPQDASNCYLDIQSGSGGTEAQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRTETGVHRLVRKSPFDSSGRRHTSFCS
type: DOMAIN
name: PCRF
description: Peptide chain release factor

phrase: ELAIEEEDEDTFNETSKELDYLESRLADLEFRRMFSGPQDASNCYLDIQSGSGGTEAQDWANMVLRMYLRWGEAHGFSPELMEVTDGDVAGIKGATIKFTGEYAFGWLRT
type: DOMAIN
name: PCRF
description: Peptide chain release factor

phrase: RASGAGGQHVNKTESA
type: DOMAIN
name: Pep_chain_release_fac_I
description: Peptide chain release factor class I

phrase: DDITIDINPSDLRIDTYRASGAGGQHVNKTESAIRITHLPTNTVVQCQNDRSQHKNKDAAMKQLKAKLFELEMLKQNADKQAAEDAKSDIGWGSQIRSYVLDDARIKDL
type: DOMAIN
name: Pep_chain_release_fac_I
description: Peptide chain release factor class I
Protein sequence:
MGNCGRKVLRALSFLLLLGSSSAQGTWEAMLPARLAEKSRAEEVAATGSRQPHADRCPPPPRTLPPGACQATRCQADSECPRHRRCCYNGCAYACLEAVPPPPVLDWLVQPKPRWLGGNGWLLDGPEEVLQAETCSTTEDGAEPLLCPSGYECHILQPGDEAQGIPNHGQCVKQRRQAEGRVLRQRLHKEYPEGDSKNVAEPGKGQQRHFP

Annotated regions:
phrase: DRCPPPPRTLPPGACQATRCQADSECPRHRRCCYNGCAYACL
type: DOMAIN
name: WAP_dom
description: WAP-type 'four-disulfide core' domain

phrase: RCPPPPRTLPPGACQATRCQADSECPRHRRCCYNGCAYACLEA
type: DOMAIN
name: WAP_dom
description: WAP-type 'four-disulfide core' domain

phrase: RQPHADRCPPPPRTLPPGACQATRCQADSECPRHRRCCYNGCAYACLEA
type: DOMAIN
name: WAP_dom
description: WAP-type 'four-disulfide core' domain
Protein sequence:
MKDHSPRKPEWLKQRLSAGDGFGALQRLLSSKGIHTVCRSAKCPNLQECWSEGTATFLLLGNVCTRTCRFCAIDTSRTPAAPETDEPERVAAAARTMALQFVVLTSVTRDDLPDGGAAHWVETIRAIRKASPRAGIECLIPDFAGNEAALDLVCKERPDVLNHNIETVPRLYEKVRPEARYRRSLDLLQRAASLFGLTTKSGMMVGMGESFEEVGEALQDLARHGCRMITIGQYLQPSARHIPVERYVTPEEFAGFRDLALSLGFSSVQSGPFVRSSYHAAASSAACTPVP

Annotated regions:
phrase: WSEGTATFLLLGNVCTRTCRFCAIDTSRTPAAPETDEPERVAAAARTMALQFVVLTSVTRDDLPDGGAAHWVETIRAIRKASPRAGIECLIPDFAGNEAALDLVCKERPDVLNHNIETVPRLYEKVRPEARYRRSLDLLQRAASLFGLTTKSGMMVGMGESFEEVGEALQDLARHGCRMITIGQYLQPSARHIPVERYVTPEEFAGFRDLALSLGF
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TATFLLLGNVCTRTCRFCAIDTSRTPAAPETDEPERVAAAARTMALQFVVLTSVTRDDLPDGGAAHWVETIRAIRKASPRAGIECLIPDFAGNEAALDLVCKERPDVLNHNIETVPRLYEKVRPEARYRRSLDLLQRAASLFGLTTKSGMMVGMGESFEEVGEALQDLARHGCRMITIGQYLQPSARHIPVERYVTPEEFAGFRDLA
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: LGNVCTRTCRFCAIDTSRTPAAPETDEPERVAAAARTMALQFVVLTSVTRDDLPDGGAAHWVETIRAIRKASPRAGIECLIPDFAGNEAALDLVCKERPDVLNHNIETVPRLYEKVRPEARYRRSLDLLQRAASLFGLTTKSGMMVGMGESFEEVGEALQD
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MREYAADWDALKAADPEVADAIANELQRERSNLRLIASENYASPAVLAALGSTMTNKYAEGYPGRRYYGGCEFVDVTEQLAIDRAKELFGAEHANVQPHAGAQANMAVFGAFLRPNDPEDKVLGMELAHGGHLTHGSPVNVSGMWFNFVGYQVDRETERLDMDRVRDLAKEHRPKIILSGYTAYAREIDFAAFREIADEVGALHWVDASHFIGLVAGGAYPSPVPHADVVTFTTHKALRGPRGAMIVCKEEHAKAIDKAVFPMMQGGPLEHCIAAKAVALKEAMTPEFSDYAHRVVRDARALAAGLADEGLRVISGGTDSHLILADVRPVGIDGKAAEAVCDEVGIALNKNQIPYDPNPPSAPSGIRVGTPGPATLGMDEGEMGEVASIIGEVLKNPEDAGAKGKSSQRVRDLMERFPPYA

Annotated regions:
phrase: LKAADPEVADAIANELQRERSNLRLIASENYASPAVLAALGSTMTNKYAEGYPGRRYYGGCEFVDVTEQLAIDRAKELFGAEHANVQPHAGAQANMAVFGAFLRPNDPEDKVLGMELAHGGHLTHGSPVNVSGMWFNFVGYQVDRETERLDMDRVRDLAKEHRPKIILSGYTAYAREIDFAAFREIADEVGALHWVDASHFIGLVAGGAYPSPVPHADVVTFTTHKALRGPRGAMIVCKEEHAKAIDKAVFPMMQGGPLEHCIAAKAVALKEAMTPEFSDYAHRVVRDARALAAGLADEGLRVISGGTDSHLILADVRPVGIDGKAAEAVCDEVGIALNKNQIPYDPNPPSAPSGIRVGTPGPATLGMDEGEMGEVASI
type: DOMAIN
name: SHMT-like_dom
description: Serine hydroxymethyltransferase-like domain
Protein sequence:
METFCLKVTFWVALVGYVIGDHPESYSTNLSTPVDFTTFHGTELSFLVTTHRPTNLALPSNGSMHSYCPQQTKITSAFKYINTVISCTIFIVGMVGNATLLRIIYQNKCMRNGPNALIASLALGDLIYVVIDLPINVFKLLAGRWPFDHNDFGVFLCKLFPFLQKSSVGITVLNLCALSVDRYRAVASWSRVQGIGIPLITAIEIVSIWILSFILAIPEAIGFVMVPFEYKGEQHKTCMLNATSKFMEFYQDVKDWWLFGFYFCMPLVCTAIFYTLMTCEMLNRRNGSLRIALSEHLKQRREVAKTVFCLVVIFALCWFPLHLSRILKKTVYDEMDKNRCELLSFLRLMDYIGINLATMNSCINPIALYFVSKKFKNCFQSCLCCCCYQSKSLMTSVPMNGTSIQWKNHEQNNHNTERSSHKDSIN

Annotated regions:
phrase: GNATLLRIIYQNKCMRNGPNALIASLALGDLIYVVIDLPINVFKLLAGRWPFDHNDFGVFLCKLFPFLQKSSVGITVLNLCALSVDRYRAVASWSRVQGIGIPLITAIEIVSIWILSFILAIPEAIGFVMVPFEYKGEQHKTCMLNATSKFMEFYQDVKDWWLFGFYFCMPLVCTAIFYTLMTCEMLNRRNGSLRIALSEHLKQRREVAKTVFCLVVIFALCWFPLHLSRILKKTVYDEMDKNRCELLSFLRLMDYIGINLATMNSCINPIA
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM
Protein sequence:
MSQNERDSLELERKNTPPDGPRLPERRPRFSVWIYLAIFLALLVHFFLFWTGTDTSTIEYSQFLEYVEKGYVERVEIVNDTKVQGRFTEAAVREGLVSVPVRQTDLLRGAQTPELIRRFTTTKPADHDLTSFLLAYNERARAEGRPTVQFTARIEENWFGGLLTWIFPLILIVALWVFLLRRMSPSSQVLNIGKNRAILYDAMGDHRVTFKDVAGLDEAKEEVAEIVEFLKNPKKFTRLGGKLPKGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGAARVRDLFRQAKEKAPCIIFIDEIDAIGRSRGRGIMMGANDERENTLNQLLVEMDGFNTDKGVIIMAATNRPDVLDPALLRPGRFDRQILIDKPDRRERLEIFKVHTRDLILGDDVDLEVLAGQTPGFAGAEIANVCNEAALLAARKGKEAVEMEDFEQAIDRVIAGLEKKNKIISPEEREIVAYHEAGHAIVGWFLRYTDPVVKVSIVPRGLAALGYAQYLPEERYLYTKEALLDRMTMAIGGRVAEELVFGRISTGAQNDLERITRMAYAMVVDYGMSERVGYVSFNLSGQYGEQAFFDKPYSEETARLIDEEVRRIINEVRERARRILEEKRDKLEALARRLLEKEVLGPRDLVEILGPRPYGDYPSPNGKDVEELKDLQKGEPTSSSAVEAPAPQTERPESSSAP

Annotated regions:
phrase: VIIMAATNRPDVLDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: IISPEEREIVAYHEAGHAIVGWFLRYTDPVVKVSIVPRGLAALGYAQYLPEERYLYTKEALLDRMTMAIGGRVAEELVFGRISTGAQNDLERITRMAYAMVVDYGMSERVGYVSFNLSGQYGEQAFFDKPYSEETARLIDEEVRRIINEVRERARRILEEKRDKLEALARRLLEKEVLGPRDLV
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: VLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGAARVRDLFRQAKEKAPCIIFIDEIDAIGRSRGRGIMMGANDERENTLNQLLVEMDGFNTDKGVIIMAATNRPDVLDPALLRPGRFDRQILI
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: DVDLEVLAGQTPGFAGAEIANVCNEAALLAARKGKEAVEMEDFE
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: WIYLAIFLALLVHFFLFWTGTDTSTIEYSQFLEYVEKGYVERVEIVNDTK
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular

phrase: LPKGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGAARVRDLFRQAKEKAPCIIFIDEIDAIGRSRGRGIMMGANDERENTLNQLLVEMDGFNTDKGVIIMAATNRPDVLDPALLRPGRFDRQILIDKP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain
Protein sequence:
MVTIRLARGGAKKRPFYQVVVTDSRSPRDGRFIERVGFFNPIATGKAEALRLDLDRIEHWIGLGATVSDRVSTLIKDAKKVA

Annotated regions:
phrase: VTIRLARGG
type: CONSERVED_SITE
name: Ribosomal_bS16_CS
description: Small ribosomal subunit protein bS16, conserved site
Protein sequence:
MESTANALVVKVSYGGVLRRFRVPVKANGQLDLEMAGLKEKIAALFNLSADAELSLTYSDEDGDVVALVDDNDLFDVTNQRLKFLKINVNAGVSTNSAAPESSGSSTPAGMPNPVSKIQKGINDVLMAVPNPMRDTISKVYMDLASKASTSSPVVGEMLDCISKLGQLSIPQESSPCSPVTKPGSSGASLSRDVPSAGGKKDISERTQTGRKPVNLNEPTGAHSKTSGHVPNSSGLGANFNECPFSGSTMNYSCPNPVNLNKHPRRVCHSKKSTNGDYWTSLGVFHKGIRCDGCGVLPITGPRFKSKVKEDYDLCTICYSVMGNEGDYTRMDKPVSVQHLHPFRGPFTQFPNPWLSHPVPRATNGGAPLRCTRPKLDSRFVLDVNVIDGTVVAPSAPFTKIWKMRNSGSLVWPQGTQIVWIGGDRFCNSLSVDLQIPKEGVPIYSELDVKVDFVAPELPGRYISYWRMATSDGAKFGQRVWVLIHVDASLKNSVVNEFHGLNLNASPSLDENFPSEFLGIMNYESAQPGSSSVNPGTVKGTDLEGEVGETQAVEKENLLVGEAHPAIPHGHSPSSSSSSFNMVDFPSMPAVEVLSGGSSSTTKDVPVPLQEDIEKNDVEITMLKELEEMGFKEIDLNKEILRDNEYNLEQSVDALCGVSEWDPILEELQEMGFCDDVTNKRLLKKNNGSIKGVVMDLLTGEKEA

Annotated regions:
phrase: NVIDGTVVAPSAPFTKIWKMRNSGSLVWPQGTQIVWIGGDRFCNSLSVDLQIPKEGVPIYSELDVKVDFVAPELPGRYISYWRMATSDGAKFGQRVWVLIH
type: DOMAIN
name: N_BRCA1_central
description: Next to BRCA1, central domain

phrase: HKGIRCDGCGVLPITGPRFKSKVKEDYDLCTICYS
type: DOMAIN
name: Znf_ZZ
description: Zinc finger, ZZ-type

phrase: HKGIRCDGCGVLPITGPRFKSKVKEDYDLCTICYSVMGNEGDYTRMDKPV
type: DOMAIN
name: Znf_ZZ
description: Zinc finger, ZZ-type

phrase: ALVVKVSYGGVLRRFRVPVKANGQLDLEMAGLKEKIAALFNLSADAELSLTYSDEDGDVVALVDDNDLFDVTNQRLKFLKINVNA
type: DOMAIN
name: PB1_dom
description: PB1 domain

phrase: PKLDSRFVLDVNVIDGTVVAPSAPFTKIWKMRNSGSLVWPQGTQIVWIGGDRFCNSLSVDLQIPKEGVPIYSELDVKVDFVAPELPGRYISYWRMATSDGAKFGQRVWVLIHV
type: DOMAIN
name: N_BRCA1_central
description: Next to BRCA1, central domain

phrase: FHKGIRCDGCGVLPITGPRFKSKVKEDYDLCTICYSVMGNEGDYT
type: DOMAIN
name: Znf_ZZ
description: Zinc finger, ZZ-type

phrase: WDPILEELQEMGFCDDVTNKRLLKKNNGSIKGVVMDL
type: DOMAIN
name: UBA_NBR1_C
description: Next to BRCA1 gene 1 protein-like, C-terminal UBA domain

phrase: ITMLKELEEMGFKEIDLNKEILRDNEYNLEQSVDALCG
type: DOMAIN
name: UBA_NBR1_C
description: Next to BRCA1 gene 1 protein-like, C-terminal UBA domain

phrase: VVKVSYGGVLRRFRVPVKANGQLDLEMAGLKEKIAALFNLSADAELSLTYSDEDGDVVALVDDNDLFDVTNQRLKFLKIN
type: DOMAIN
name: PB1_dom
description: PB1 domain
Protein sequence:
MTTSIQRQSSENLWERFCNWVTSTENRLYLGWFGVLMVPTLLVATICFILAFIAAPPVDIDGIREPVSGSLLYGNNMITAAVVPSSNAIGLHFYPIWEAANIDEWLYNGGPYQMIVFHFLIGIFCYMGREWELSYRLGMRPWIAVAYSAPVAAATAVLLIYSIGQGSFSDGLPLGISGTFNFMIVLQAEHNVLMHPLHMLGVVGVFGGALFAAMHGSLVTSSLVRETSENESLNQGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFLLGAWPVVGIWCASLAVACFAFNLNGFNFNESLLDAEGRVINTWADVINHANLGIEAMHERNVHNFPLDLASGESIPVALVAPKVNA

Annotated regions:
phrase: NVLMHPLHMLGVVGVFGGALFAAMHG
type: CONSERVED_SITE
name: Photo_RC_L/M_CS
description: Photosynthetic reaction centre, L/M, conserved site
Protein sequence:
MTKEQIIEAVKSMTVLELNDLVKAIEEEFGVTAAAPVAVAGGAGEAAAEQTEFDVVLASAGAQKIKVIKAVREITGLGLKEAKELVDNTPKAIKEGVTKEEAEEMKAKLEEVGAAVEVK

Annotated regions:
phrase: FDVVLASAGAQKIKVIKAVREITGLGLKEAKELVDNTPKAIKEGVTKEEAEEMKAKLEEVGAAVEV
type: DOMAIN
name: Ribosomal_bL12_C
description: Large ribosomal subunit protein bL12, C-terminal

phrase: TKEQIIEAVKSMTVLELNDLVKAIEEEFGVTAAAPVAVAGGAGEAA
type: DOMAIN
name: Ribosomal_bL12_oligo
description: Large ribosomal subunit protein bL12, oligomerization
Protein sequence:
MREAICIHIGQAGCQVGNACWELFCLEHGIQPDGAMPSDKTIGVEDDAFNTFFSETGAGKHVPRAVFLDLEPTVVDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVYHAVGGGTGSGLGALLLERLSVDYGKKSKLGYTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAAMLDNEAIYDLTRRNLDIERPTYTNLNRLIGQVVSSLTASLRFDGALNVDLTEFQTNLVPYPRIHFVLTSYAPVISAEKAYHEQLSVSEISNAVFEPASMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWSPTGFKCGINYQPPTVVPGGDLAKVQRAVCMIANSTAIAEVFARIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESADMDGEEDVEEY

Annotated regions:
phrase: GGGTGS
type: CONSERVED_SITE
name: Tubulin_CS
description: Tubulin, conserved site

phrase: PRIHFVLTSYAPVISAEKAYHEQLSVSEISNAVFEPASMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWSPTGFKCGINYQPPTVVPGGDLAKVQRAVCMIANSTAIAEVFARI
type: DOMAIN
name: Tubulin/FtsZ_2-layer-sand-dom
description: Tubulin/FtsZ, 2-layer sandwich domain

phrase: LNVDLTEFQTNLVPYPRIHFVLTSYAPVISAEKAYHEQLSVSEISNAVFEPASMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWSPTGFKCGINYQPPTVVPGGDLAKVQRAVCMIANSTAIAEVFARID
type: DOMAIN
name: Tubulin/FtsZ_2-layer-sand-dom
description: Tubulin/FtsZ, 2-layer sandwich domain

phrase: FNTFFSETGAGKHVPRAVFLDLEPTVVDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVYHAVGGGTGSGLGALLLERLSVDYGKKSKLGYTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAAMLDNEAIYDLTRRNLDIERPTYTNLNRLIGQVVSSLTASLRFD
type: DOMAIN
name: Tubulin_FtsZ_GTPase
description: Tubulin/FtsZ, GTPase domain

phrase: AICIHIGQAGCQVGNACWELFCLEHGIQPDGAMPSDKTIGVEDDAFNTFFSETGAGKHVPRAVFLDLEPTVVDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVYHAVGGGTGSGLGALLLERLSVDYGKKSKLGYTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAAMLDNEAIYD
type: DOMAIN
name: Tubulin_FtsZ_GTPase
description: Tubulin/FtsZ, GTPase domain
Protein sequence:
MESQQLSNYPHISHGSACASVTSKEVHTNQDPLDVSASKIQEYDKASTKANSQQTTTPASSAVPENLHHASPQPASVPPPQNGPYPQQCMMTQNQANPSGWSFYGHPSMIPYTPYQMSPMYFPPGPQSQFPQYPSSVGTPLSTPSPESGNTFTDSSSADSDMTSTKKYVRPPPMLTSPNDFPNWVKTYIKFLQNSNLGGIIPTVNGKPVPPMLTSPNDFPNWVKTYIKFLQNSNLGGIIPTVNGKPVRQITDDELTFLYNTFQIFAPSQFLPTWVKDILSVDYTDIMKILSKSIEKMQSDTQEANDIVTLANLQYNGSTPADAFETKVTNIIDRLNNNGIHINNKVACQLIMRGLSGEYKFLRYTRHRHLNMTVAELFLDIHAIYEEQQGSRNSKPNYRRNPSDEKNDSRSYTNTTKPKVIARNPQKTNNSKSKTARAHNVSTSNNSPSTDNDSISKSTTEPIQLNNKHDLHLGQKLTESTVNHTNHSDDELPGHLLLDSGASRTLIRSAHHIHSASSNPDINVVDAQKRNIPINAIGDLQFHFQDNTKTSIKVLHTPNIAYDLLSLNELAAVDITACFTKNVLERSDGTVLAPIVKYGDFYWVSKKYLLPSNISVPTINNVHTSESTRKYPYPFIHRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQCPDCLIGKSTKHRHIKGSRLKYQNSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSARQHAGLAGLDISTLLPFGQPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKESRLDQFNYDALTFDEDLNRLTASYHSFIASNEIQQSNDLNIESDHDFQSDIELHPEQLRNVLSKAVSPTDSTPPSTHTEDSKRVSKTNIRAPREVDPNISESNILPSKKRSSTPQISDIESTGSGGMHRLDVPLLAPMSQSNTHESSHASKSKDFRHSDSYSDNETNHTNVPISSTGGTNNKTVPQTSEQETEKRIIHRSPSIDTSSSESNSLHHVVPIKTSDTCPKENTEESIIADLPLPDLPPEPPTELSDSFKELPPINSHQTNSSLGGIGDSNAYTTINSKKRSLEDNETEIKVSRDTWNTKNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIKEKEKYIQAYHKEVNQLLMMKTWDTDRYYDRKEIDPKRVINSMFIFNRKRDGTHKARFVARGDIQHPDTYDPGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMNDKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFKNSQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRGKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQDELEIDEDEYKEKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWHKNKPTEPDNKLVAISDASYGNQPYYKSQIGNIYLLNGKVIGGKSTKASLTCTSTTEAEIHAISESVPLLNNLSHLVQELNKKPITKGLLTDSKSTISIIISNNEEKFRNRFFGTKAMRLRDEVSGNHLHVCYIETKKNIADVMTKPLPIKTFKLLTNKWIH

Annotated regions:
phrase: LLLDSGASRTL
type: ACTIVE_SITE
name: Aspartic_peptidase_AS
description: Aspartic peptidase, active site

phrase: KRVINSMFIFNRKRDGTHKARFVARGDIQHPDTYDPGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPPHLGMNDKLIRLKKSLYGLKQSGANWYETIKSYLIKQCGMEEVRGWSCVFKNSQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRGKYMKLGME
type: DOMAIN
name: RVT_2
description: Reverse transcriptase, RNA-dependent DNA polymerase

phrase: EPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTT
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: NSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSKKSARQHAGLAGLDISTLL
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core