nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MATRFKGLYNKSFKCFSDIFDVEEEEEMEIGYPTDVRHVSHIGWDSSSSSAPSWLHEFKTSNNVLEPNSSWPFQDLKSAMEAFGEVESSKEMERESTKQNLKKKLSSKASLLCNSWSPRFSRSSKVLA

Annotated regions:
phrase: EIGYPTDVRHVSHIGWDSSSSSAPSWLHEFKT
type: DOMAIN
name: CRIB_dom
description: CRIB domain

phrase: IGYPTDVRHVSHIGWDSSSSSAPSWLHEFKTSNNVLEPN
type: DOMAIN
name: CRIB_dom
description: CRIB domain

phrase: IGYPTDVRHVSHI
type: DOMAIN
name: CRIB_dom
description: CRIB domain
Protein sequence:
MTENIHKHRILILDFGSQYTQLVARRVRELGVYCELWAWDVTEAQIRDFNPSGIILSGGPESTTEENSPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEASNEREFGYAQVEVVNDSALVRGIEDALTADGKPLLDVWMSHGDKVTAIPSDFVTVASTESCPFAIMANEEKRFYGVQFHPEVTHTRQGMRMLERFVRDICQCEALWTPAKIIDDAVARIREQVGDDKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRLSEAEQVLDMFGDHFGLNIVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGTIYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLELGLPYDMLYRHPFPGPGLGVRVLGEVKKEYCDLLRRADAIFIEELRKADLYDKVSQAFTVFLPVRSVGVMGDGRKYDWVVSLRAVETIDFMTAHWAHLPYDFLGRVSNRIINEVNGISRVVYDISGKPPATIEWE

Annotated regions:
phrase: KIIDDAVARIREQVGDDKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRLSEAEQVLDMFGDHFGLNIVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGTIYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLELGLPYDMLYRHPFPGPGLGVRVLGEVKKEYCDLLRRADAIFIEELRKADLYDKVSQAFTVFLPVRSVGVMGDGRKYDWVVSLRAVETIDFMTAHWAHLPYDFLGRVSNRIINEVNGISRVVYDISGKPPATIEW
type: DOMAIN
name: GMP_synth_C
description: GMP synthase, C-terminal

phrase: ILILDFGSQYTQLVARRVRELGVYCELWAWDVTEAQIRDFNPSGIILSGGPESTTEENSPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEASNEREFGYAQVEVVNDSALVRGIEDALTADGKPLLDVWMSHGDKVTAIPSDFVTVASTESCPFAIMANEEKRFYGVQFHPEVTHTRQGMRMLERF
type: DOMAIN
name: GMP_synth_GATase
description: GMP synthase, glutamine amidotransferase

phrase: EQVGDDKVILGLSGGVDSSVTAMLLHRAIGKN
type: DOMAIN
name: NAD/GMP_synthase
description: NAD/GMP synthase

phrase: IREQVGDDKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRLSEAEQVLDMFGDHFGLNIVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGTIYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLELGLPYDMLYRHPFPGPGLGVRVLGEVKKEYCDLLRRADAIFIEELRKADLYDKVSQAFTVFLPVRSVGVMGDGRKYDWVVSLRAVETIDFMTAHWAHLPYDFLGRVSNRIINEVNGISRVVYDISGKPPATIEW
type: DOMAIN
name: GMP_synth_C
description: GMP synthase, C-terminal

phrase: EELRKADLYDKVSQAFTVFLPVRSVGVMGDGRKYDWVVSLRAVETIDFMTAHWAHLPYDFLGRVSNRIINEVNGISRVVYDISGKPPATIE
type: DOMAIN
name: GMP_synth_C
description: GMP synthase, C-terminal

phrase: WTPAKIIDDAVARIREQVGDDKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRLSEAEQVLDMFGDHFGLNIVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQGTIYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLELGLPYDMLY
type: DOMAIN
name: GMPS_ATP_PPase_dom
description: GMP synthetase ATP pyrophosphatase domain

phrase: ILILDFGSQYTQLVARRVRELGVYCELWAWDVTEAQIRDFNPSGIILSGGPESTTEENSPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEASNEREFGYAQVEVVNDSALVRGIEDALTADGKPLLDVWMSHGDKVTAIPSDFVTVASTESCPFAIMANEEKRFYGVQFHPEVTHTRQGMRMLERFVRDICQC
type: DOMAIN
name: GMP_synth_GATase
description: GMP synthase, glutamine amidotransferase

phrase: LILDFGSQYTQLVARRVRELGVYCELWAWDVTEAQIRDFNPSGIILSGGPESTTEENSPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEASNEREFGYAQVEVVNDSALVRGIEDALTADGKPLLDVWMSHGDKVTAIPSDFVTVASTESCPFAIMANEEKRFYGVQFHPEVTHTRQGMRMLERFV
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase
Protein sequence:
MAQLYFYYSAMNAGKSTALLQSSYNYQERGMRTVVYTAEIDDRFGAGKVSSRIGLSSPAKLFNQNTSLFEEIRAESARQTIHCVLVDESQFLTRQQVYQLSEVVDKLDIPVLCYGLRTDFRGELFVGSQYLLAWSDKLVELKTICFCGRKASMVLRLDQDGRPYNEGEQVVIGGNERYVSVCRKHYKDALEEGSLTAIQERHRHI

Annotated regions:
phrase: GGNERYVSVCRKH
type: CONSERVED_SITE
name: Thymidine_kinase_CS
description: Thymidine kinase, conserved site
Protein sequence:
MDSQSFLKSLAVFSDMTDPELALLAGDAQWVDFAPSAPILRRGDISRYLWIVHEGEVRFSFPPSGTAGEASGTLGGGEIFGEMSVMTGEPAVADISALSACRLLRIPRESFSRLIAGNPKTLAKFARLITEQMLRAARAVAQADLQRKAHCENQDPYDLNFSSASEAMKILVLNSGSSSLKYSLYDTSRDAALIDGEIEKIGSGEAVHRIKTLRIDRKEPEKSILTMDDAFNAMVRVITDPSFEALQRLNDLHAIGHRVVHGGGKFPNAVFIDEDVLESIRSFSGLAPLHNPFNLAGIERMRKLLPSVPQVAVFDTAFHQTMPSHAYTYALPHDLCKKEQVRRYGFHGTNHEYVALRAATWLRRPAGELKIISCHLGNGASVCAIDHGHSIDTSMGMTPLEGLIMGTRPGDVDPGALLHLMKTGPLDIEQTDRMLNRESGLRGISGVSNDMREILSAAATGDVRCTRAVSAFCYRIKKYVGAYMAALGGLDVLIFTAGIGENSAEIRAGVCQGLESFGIQLSHERNRAATRQEQVQDVSLPDAKVRVLVIPADEERMIVRKTLHALGRVRTPEEARMLRSKPVPVSVSAHHVHLSQGDFETLFGRGKTMTPRSELSQPGQFACVETVNLIGPKGRVNRVRILGPVRKESQVEISRTEEFQLGIDAPIRESGDLEGTPGIVIEGDIGTVRLEKGVICAMRHIHMSPADALGFGLRNRDVVRVRVPGERELIFGDVLVRVDPNYRLDMHLDTDEANAAEISGGAEGIIES

Annotated regions:
phrase: VFSDMTDPELALLAGDAQWVDFAPSAPILRRGDISRYLWIVHEGEVRFSFPPSGTAGEASGTLGGGEIFGEMSVMTGEPAVADISALSACRLLRIPRESFSRLIAGN
type: DOMAIN
name: cNMP-bd_dom
description: Cyclic nucleotide-binding domain

phrase: IISCHLGNGASVCAIDH
type: CONSERVED_SITE
name: Aliphatic_acid_kinase_CS
description: Aliphatic acid kinase, short-chain, conserved site

phrase: DFAPSAPILRRGDISRYLWIVHEGEVRFSFPPSGTAGEASGTLGGGEIFGEMSVMTGEPAVADISALSACRLLRIPRESFSRLI
type: DOMAIN
name: cNMP-bd_dom
description: Cyclic nucleotide-binding domain

phrase: VFSDMTDPELALLAGDAQWVDFAPSAPILRRGDISRYLWIVHEGEVRFSFPPSGTAGEASGTLGGGEIFGEMSVMTGEPAVADISALSACRLLRIPRESFSRL
type: DOMAIN
name: cNMP-bd_dom
description: Cyclic nucleotide-binding domain

phrase: VFSDMTDPELALLAGDAQWVDFAPSAPILRRGDISRYLWIVHEGEVRFSFPPSGTAGEASGTLGGGEIFGEMSVMTGEPAVADISALSACRLLRIPRESFSRLIAGNPKTLAKFARLITEQ
type: DOMAIN
name: cNMP-bd_dom
description: Cyclic nucleotide-binding domain

phrase: ILVLNSGSSSL
type: CONSERVED_SITE
name: Aliphatic_acid_kinase_CS
description: Aliphatic acid kinase, short-chain, conserved site
Protein sequence:
MNPRRQKRLIVISAIVLVIGAAIGLMLYALSQNIDLFYTPSEVIDGKQIGQVTEVPQVGQRLRIGGMVVPGSVKRDNESLAVSFDLIDTGPIVTVSYQGLLPDLFREGQGIVATGVLTAENHIEAHEVLAKHDEEYMPPELAEKMKGIKHVKPEQAYSTPKVSG

Annotated regions:
Protein sequence:
MPVIKVRENEPFDVALRRFKRSCEKAGVLSDVRSREFYEKPTTIRKRAKASAVKRHMKKLARENARRNRLY

Annotated regions:
phrase: DVALRRFKRSCE
type: CONSERVED_SITE
name: Ribosomal_bS21_CS
description: Small ribosomal subunit protein bS21, conserved site
Protein sequence:
MIEPLHTAPPLLAAHDLAFSRNEEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVERGQIQIDGKSAKRGDRSRFMAYLGHLPGLKADLSTLENLHFLCGLHGRRAKQMPGSALAIVGLAGYEDALVRQLSAGQRKRLALARLWLSPAPLWLLDEPYANLDLDGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTRMLTLEVAA

Annotated regions:
phrase: AGEALLVQGDNGAGKTTLLRVLAGLLHVERGQIQIDGKSAKRGDRSRFMAYLGHLPGLKADLSTLENLHFLCGLHGRRAKQMPGSALAIVGLAGYEDALVRQLSAGQRKRLALARLWLSPAPLWLLDEPYANLDLDGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTRMLTLEV
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: LSAGQRKRLALARL
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: LAAHDLAFSRNEEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVERGQIQIDGKSAKRGDRSRFMAYLGHLPGLKADLSTLENLHFLCGLHGRRAKQMPGSALAIVGLAGYEDALVRQLSAGQRKRLALARLWLSPAPLWLLDEPYANLDLDGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTRMLTLEVA
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: PLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVERGQIQIDGKSAKRGDRSRFMAYLGHLPGLKADLSTLENLHFLCGLHGRRAKQMPGSALAIVGLAGYEDALVRQLSAGQRKRLALARLWLSPAPLWLLDEP
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain
Protein sequence:
MIFLIFSILFLHLANCDYTPDWESLDNRPLPSWYDDSKFGIFCHWGLYSVPAFRSEWMWWYWKGTQPDKDVVNFVDKNYKPGTTYADFAKDFTAEYFNANQFAETVKTSGARYFVFTSKHHEGFTMWPSRTSWNWNSMDIGPKRDIVGELRDAFKKTDVHFGLYFSQFEWFHPMFLDDGKFNTTFYPEQVSYPQMIDIVTKYNPEVVWSDGEWDKSDDYWKAKEFLAWLYNSSPVKDQVVVNDRWGTGTMGKHGGFMTYSDHYDPGKLLEKKWENCMTLDKHSWGNRRDMKASEVNTAYEIIEQLARTIACNGNLLLNVGPNMHGQIPAIFEDRLEEIGRFVNITSEAIFGTRPWIHQNDTSASNVWYTSKYSSGKKPLKNLYQNVYNFQLEEHTIVYAWILDTSHEQFELKSVKTTKNTTATILGTDVVLTGFEESDSMIILSSKIDWKKLPRRDIIVLKIEKAASYLRNPLMSTNEHHVQ

Annotated regions:
phrase: PGKLLEKKWEN
type: CONSERVED_SITE
name: Glyco_hydro_29_CS
description: Glycoside hydrolase, family 29, conserved site
Protein sequence:
MNLETLRQERRKWLTWKNIVPYQEAIKALPEYDDVEVSLGDVVDIQIADLSHKDAEQIRETALLMKPWRKGPFRINDLFIDSEWQSQIKYNLLEPHFDLKGKVVGDIGCNNGYYLFRMLSQKPEKLIGFDPSAIYYSQFRFLEHFIKSDIVYELLGVEHVEFYEHKFDTLFCLGVLYHRSDPVAMLKSLFKGLNKGGELILDTFMIDGEGEMCLTPRDRYSKIPNIYFVPTVNALKNWCLRAGFESVEVLEIMKTDLNEQRKTEWIDTQSLEDFLDPDDPEKTVEGYPAPKRVYIKAIKKA

Annotated regions:
Protein sequence:
MAEAVGAVTLIAAPARRRWLWSALAAMLGLLTARISALEVHTPKEIFVVNGTQGKLTCTFDSPNTTGWLTTVSWSFQPEGTDSAVSFFHYSQGQVYIGDYPPFKDRVTWAGDLDKKDASINIENIQAVHNGTYICDVKNPPDIVVRPGQIRLHVVEIDNLLVFLVWVVVGTVTAVVLGLTLLISLVLVVLYRRKHSKRDYTGCSTSERLSPVKQAPRKCPSDTEGLVKSPPSAGSHQGPVIYAQLDHSGGHHSGKINKSESVVYADIRKD

Annotated regions:
phrase: ARISALEVHTPKEIFVVNGTQGKLTCTFDSPNTTGWLTTVSWSFQPEGTDSAVSFFHYSQGQVYIGDYPPFKDRVTWAGDLDKKDASINIENIQAVHNGTYICDVK
type: DOMAIN
name: Ig-like_dom
description: Immunoglobulin-like domain

phrase: QGKLTCTFDSPNTTGWLTTVSWSFQPEGTDSAVSFFHYSQGQVYIGDYPPFKDRVTWAGDLDKKDASINIENIQAVHNGTYICD
type: DOMAIN
name: Ig_V-set
description: Immunoglobulin V-set domain

phrase: PKEIFVVNGTQGKLTCTFDSPNTTGWLTTVSWSFQPEGTDSAVSFFHYSQGQVYIGDYPPFKDRVTWAGDLDKKDASINIENIQAVHNGTYICDVKNPPDIVVRPGQIRLHV
type: DOMAIN
name: Ig_sub
description: Immunoglobulin domain subtype

phrase: TPKEIFVVNGTQGKLTCTFDSPNTTGWLTTVSWSFQPEGTDSAVSFFHYSQGQVYIGDYPPFKDRVTWAGDLDKKDASINIENIQAVHNGTYICDVKNPPDIVVRPGQIRLHV
type: DOMAIN
name: Ig_V-set
description: Immunoglobulin V-set domain
Protein sequence:
MKNLFLFCRAGYEKECAAEIQQRAAELNVGGFVKANNNDAYVVYQCFEEDGGDILVKQLPLDSLIFARQMFAASELLADLPESDRVSPIVAALSDVSKAGELRVETPDTNEAKELSAFCRKFTVPLRQHLKKSGSLLAQENPKRPIIHVCFIGPGRAYVGYSFSNNSSPYFMGIPRLKMAADAPSRSSLKLDEAFAQFVPKEEQEERVRSGMNAVDLGACPGGWTYQLVRRGMMVSAVDNGPMNEKLMETGQVKHFREDGFRFEPQRKNIYWLVCDMVEKPARVAELIEAWAINGWFKEAIFNLKLPMKSRYKEVMAILNTMQEILKENGINEFQLQCKHLYHDRDEVTVHLWIRPSQAWN

Annotated regions:
phrase: MKNLFLFCRAGYEKECAAEIQQRAAELNVGGFVKANNNDAYVVYQCFEEDGGDILVKQLPLDSLIFARQM
type: DOMAIN
name: RlmM_FDX
description: RlmM ferredoxin-like domain

phrase: SRSSLKLDEAFAQFVPKEEQEERVRSGMNAVDLGACPGGWTYQLVRRGMMVSAVDNGPMNEKLMETGQVKHFREDGFRFEPQRKNIYWLVCDMV
type: DOMAIN
name: RNA_MeTrfase_FtsJ_dom
description: Ribosomal RNA methyltransferase, FtsJ domain

phrase: DRVSPIVAALSDVSKAGELRVETPDTNEAKELSAFCRKFTVPLRQHLKKSGSLLAQENPKRPIIHVCFIGPGRAYVGYS
type: DOMAIN
name: RlmM_THUMP-like
description: Ribosomal RNA large subunit methyltransferase M, THUMP-like domain
Protein sequence:
MSQVNTSQGPVAQGRQRRLSSLSEFNDPFSNAEVYYGPPTDPRKQKQAKPAKINRTRTMSVFDNVSPFKKTGFGKLQQTRRGSEDDTYSSSQGNRRFFIEDVDKTLNELLAAEDTDKNYQITIEDTGPKVLKVGTANSYGYKHINIRGTYMLSNLLQELTIAKSFGRHQIFLDEARINENPVNRLSRLINTQFWNSLTRRVDLNNVGEIAKDTKIDTPGAKNPRIYVPYDCPEQYEFYVQASQMHPSLKLEVEYLPKKITAEYVKSVNDTPGLLALAMEEHFNPSTGEKTLIGYPYAVPGGRFNELYGWDSYMMALGLLEANKTDVARGMVEHFIFEINHYGKILNANRSYYLCRSQPPFLTEMALVVFKKLGGRSNPDAVDLLKRAFQASIKEYKTVWTASPRLDPETGLSRYHPNGLGIPPETESDHFDTVLLPYASKHGVTLDEFKQLYNDGKIKEPKLDEFFLHDRGVRESGHDTTYRFEGVCAYLATIDLNSLLYKYEIDIADFIKEFCDDKYEDPLDHSITTSAMWKEMAKIRQEKITKYMWDDESGFFFDYNTKIKHRTSYESATTFWALWAGLATKEQAQKMVEKALPKLEMLGGLAACTERSRGPISISRPIRQWDYPFGWAPHQILAWEGLRSYGYLTVTNRLAYRWLFMMTKAFVDYNGIVVEKYDVTRGTDPHRVEAEYGNQGADFKGAATEGFGWVNASYILGLKYMNSHARRALGACIPPISFFSSLRPQERNLYGL

Annotated regions:
phrase: QWDYPFGWA
type: CONSERVED_SITE
name: Glyco_hydro_37_CS
description: Glycoside hydrolase, family 37, conserved site

phrase: PGGRFNELYGWDS
type: CONSERVED_SITE
name: Glyco_hydro_37_CS
description: Glycoside hydrolase, family 37, conserved site

phrase: LNELLAAEDTDKNYQITIEDTGPKVLKVG
type: DOMAIN
name: Trehalase_Ca-bd
description: Neutral trehalase Ca2+ binding
Protein sequence:
MEKLVIATRRSQLALWQSEYVKSRLLEHYPNMQIELQEFVTKGDKILDVPLAKIGGKGLFTKELEVAMLEGSAHLAVHSLKDVPTQFEDGLMLAAVTKRFDPRDAFLSNKYTSLEELPKGAIVGTTSLRRRMALKILRPDIELKDLRGNINTRIAKLNAGEYDAIILAATGIQKLGIENEVKYFSPISTDIMIPSMGQATLGIETTNDPKVLEILKVLNDNNAHIESTVERSFVDTLQGGCQVPIGVKATILDENSIRVQAIVGMPDGSEYISEDITADIEDYETIGQNLAQIFIDQGAKELLEKAEKVAFK

Annotated regions:
phrase: ESTVERSFVDTLQGGCQVPIGVKATILDENSIRVQAIVGMPDGSEYISEDITADIEDYETIGQNLA
type: DOMAIN
name: Porphobilinogen_deaminase_C
description: Porphobilinogen deaminase, C-terminal

phrase: ERSFVDTLQGGCQVPI
type: BINDING_SITE
name: Porphobilin_deaminase_cofac_BS
description: Porphobilinogen deaminase, dipyrromethane cofactor binding site

phrase: LVIATRRSQLALWQSEYVKSRLLEHYPNMQIELQEFVTKGDKILDVPLAKIGGKGLFTKELEVAMLEGSAHLAVHSLKDVPTQFEDGLMLAAVTKRFDPRDAFLSNKYTSLEELPKGAIVGTTSLRRRMALKILRPDIELKDLRGNINTRIAKLNAGEYDAIILAATGIQKLGIENEVKYFSPISTDIMIPSMGQATLGIETTNDP
type: DOMAIN
name: Porphobilin_deaminase_N
description: Porphobilinogen deaminase, N-terminal
Protein sequence:
MGQKVNPKGLRIGIIRDWEGKWYADKRNYAALLHEDIKIRKFIKEKLFAAGISRIQIERAANRVKVSIHTAKPGIVIGRGGAEVENLRKQLENLTGKQVSVNIVEIKVPELDAQLVAENVAAQLEKRIAFRRAMKQVVSRSMKMGAKGIKVACGGRLAGAEIARTEWYSEGKVPLHTLRADIDYGFAEANTTYGKIGVKVWIYRGEVLPEAKTPAKTAARGGKEAPGEGGE

Annotated regions:
phrase: ARTEWYSEGKVPLHTLRADIDYGFAEANTTYGKI
type: CONSERVED_SITE
name: Ribosomal_uS3_CS
description: Small ribosomal subunit protein uS3, conserved site

phrase: AANRVKVSIHTAKPGIVIGRGGAEVENLRKQLENLTGKQVSVNIVEIKVPELDAQLVAENVAAQL
type: DOMAIN
name: KH_dom
description: K Homology domain

phrase: IRKFIKEKLFAAGISRIQIERAANRVKVSIHTAKPGIVIGRGGAEVENLRKQLENLTGKQVSVNIVEI
type: DOMAIN
name: KH_dom_type_2
description: K Homology domain, type 2

phrase: VAAQLEKRIAFRRAMKQVVSRSMKMGAKGIKVACGGRLAGAEIARTEWYSEGKVPLHTLRADIDYGFAEANTTYGKIGVKVW
type: DOMAIN
name: Ribosomal_uS3_C
description: Small ribosomal subunit protein uS3, C-terminal

phrase: KIRKFIKEKLFAAGISRIQIERAANRVKVSIHTAKPGIVIGRGGAEVENLRKQLENLTGKQVSVNIVEIKVPE
type: DOMAIN
name: KH_dom_type_2
description: K Homology domain, type 2
Protein sequence:
MMSGEYGDFNNTNNKELSLLDKLKKAWINEKYAPNLLNYEDVIIKEVMEKIEEKESLCASAISNINLQFTANIYEMEIERLKYIIKCYLVQRIKKIDKFYSSILLEIENDEYDSYKLLSEFEINYCQKYKALMDGYFKNTLLNSIPKDFQKMDSNSINRPFLNTFVFCKPREDLGDFLVDDETIDFKKTSIYFLKYLPIKSLVEGGKMDLI

Annotated regions:
phrase: PFLNTFVFCKPREDLGDFLVDDETIDFKKTSIYFLKYLPIKSLVEGGKMDL
type: DOMAIN
name: SLD5_C
description: DNA replication complex GINS protein SLD5, C-terminal

phrase: NLQFTANIYEMEIERLKYIIKCYLVQRIKKIDKFYSSILLEIENDEYDSYKLLSEFEINYCQKYKALMDGYFK
type: DOMAIN
name: GINS_A
description: GINS subunit, domain A

phrase: LLDKLKKAWINEKYAPNLLNYEDVIIKEVMEKIEEKESLCASAISNINLQFTANIYEMEIERLKYIIKCYLVQRIKKIDKFYSSILLEIENDEYDSYKLLSEFEINYCQKYKALMDGYFKNTL
type: DOMAIN
name: Sld5_GINS_A
description: GINS complex protein Sld5, alpha-helical domain

phrase: PFLNTFVFCKPREDLGDFLVDDETIDFKKTSIYFLKYLPIKSLVEGGKMDL
type: DOMAIN
name: SLD5_C
description: DNA replication complex GINS protein SLD5, C-terminal
Protein sequence:
MDVDLPPPGPLTSGGLRVTALGGINEIGRNMTVFEHLGRLLIIDCGVLFPGHDEPGVDLILPDMRHVEDRLDDIEALVLTHGHEDHIGAIPFLLKLRPDIPVVGSKFTLALVAEKCREYRITPVFVEVREGQSTRHGVFECEYFAVNHSTPDALAIAVYTGAGTILHTGDIKFDQLPPDGRPTDLPGMSRLGDTGVDLLLCDSTNAEIPGVGPSESEVGPTLHRLIRGADGRVIVACFASNVDRVQQIIDAAVALGRRVSFVGRSMVRNMRVARQLGFLRVADSDLIDIAAAETMAPDQVVLITTGTQGEPMSALSRMSRGEHRSITLTAGDLIVLSSSLIPGNEEAVFGVIDALSKIGARVVTNAQARVHVSGHAYAGELLFLYNGVRPRNVMPVHGTWRMLRANAKLAASTGVPQESILLAENGVSVDLVAGKASISGAVPVGKMFVDGLIAGDVGDITLGERLILSSGFVAVTVVVRRGTGQPLAAPHLHSRGFSEDPKALEPAVRKVEAELESLVAANVTDPIRIAQGVRRTVGKWVGETYRRQPMIVPTVIEV

Annotated regions:
phrase: DLILPDMRHVEDRLDDIEALVLTHGHEDHIGAIPFLLKLRPDIPVVGSKFTLALVAEKCREYRITPVFVEVREGQSTRHGVFECEYFAVNHSTPDALAIAVYTGAGTILHTGDI
type: DOMAIN
name: Metallo-B-lactamas
description: Metallo-beta-lactamase

phrase: GRNMTVFEHLGRLLIIDCGVLFPGHDEPGVDLILPDMRHVEDRLDDIEALVLTHGHEDHIGAIPFLLKLRPDIPVVGSKFTLALVAEKCREYRITPVFVEVREGQSTRHGVFECEYFAVNHSTPDALAIAVYTGAGTILHTGDIKFDQLPPDGRPTDLPGMSRLGDTGVDLLLCDSTNAEIPGVGPSESEVGPT
type: DOMAIN
name: Metallo-B-lactamas
description: Metallo-beta-lactamase

phrase: GRVIVACFASNVDRVQQIIDAAVALGRRVSFVGRSMVRNMRVARQLGFLRVADSDLIDIAAAETMAPDQVVLITTGTQGEPMSALSRMSRGEHRSITLTAGDLIVLSSSLIPGNEEAVFGVIDA
type: DOMAIN
name: RNase_J_b_CASP
description: Ribonuclease J, beta-CASP domain

phrase: LGERLILSSGFVAVTVVVRRGTGQPLAAPHLHSRGFSEDPKALEPAVRKVEAELESLVAANVTDPIRIAQGVRRTVGKWVGETYRRQPMIVPTVIE
type: DOMAIN
name: RNase_J_C
description: Ribonuclease J, C-terminal

phrase: RVHVSGHAYAGELLFLYNGVRPRNVMPVHGTWRMLRANAKLAAST
type: DOMAIN
name: RMMBL
description: Zn-dependent metallo-hydrolase, RNA specificity domain
Protein sequence:
MKHLPKHLRPRWRYLAVGIETWPNASFGRRAFQREVWYAAQNLLGDTGSAETDMTVLQFHDYDGTAEAIVRTRRGQTNPARAALTCLDSVDDDDVRVRVRGISGTVRACEEKYIRGPPEFTEQRHVVFENADRSATVRPPRYDVETASDGAFVGATALDFR

Annotated regions:
Protein sequence:
MLDDTIAALATPPGEGGISIIRLSGSQAIAIVAKVFKPVKGPDLTTTRSHTLRLGFIIDPVSGESLDEVLVSVMRAPHSYTAEDVVEINCHGGALATSRVLQLVLRTGARLAEPGEFTRRAFLNGRLDLAQAEAVLEIIRARSSRGLTAALDHLRGNLSRKIGELNERLTGILAALEASMDFPEEVGEVDPENLADLRRILAGVDRLLATWEEGRLLTEGLKVAIVGRPNVGKSSLLNALLNQERAIVSNIPGTTRDTIEETLQLGGFTCRLIDTAGLRETADELESIGVARSKKAIAAADLVLVVVDLQTGIQDEDRRVLESVRDKVLIIIGNKLDLVAHDINKKLADLESFAGNYPRVAVSALKGKGLDELARKVQEIVLGGRALAGSDEPLITNARHRAALENCREHLASAIKAWEEGLPEDLIAIDLWSAADYLGEIIGTTAREDLLDRIFSDFCIGK

Annotated regions:
phrase: VAIVGRPNVGKSSLLNALLN
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: LIDTAGLRETADELE
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: LKVAIVGRPNVGKSSLLNALLNQERAIVSNIPGTTRDTIEETLQLGGFTCRLIDTAGLRETADELESIGVARSKKAIAAADLVLVVVDLQTGIQDEDRRVLESVRDKVLIIIGNKLDLVAHDINKKLADLESFAGNYPRVAVSALKGKGLDELARK
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: DTIAALATPPGEGGISIIRLSGSQAIAIVAKVFKPVKGPDLTTTRSHTLRLGFIIDPVSGESLDEVLVSVMRAPHSYTAEDVVEINCHGGALATSRVLQLVLRTGARLAEPGEFTRRAFLN
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal

phrase: LAQAEAVLEIIRARSSRGLTAALDHLRGNLSRKIGELNERLTGILAALEASMDFPEEVGEVDPENLADLRRILAGVDRLLATWEEGRLLTEGLKVAIVGRPNVGKSSLLNALLNQERAIVSNIPGTTRDTIEETLQLGGFTCRLIDTAGLRETADELESIGVARSKKAIAAADLVLVVVDLQTGIQDEDRRVLESVRDKVLIIIGNKLDLVAHDINKKLADLESFAGNYPRVAVSALKGKGLDELARKVQEIVLGGRALAGSDEPLITNARHRAALENCREHLASAIKAWEEGLPEDLIAIDLWSAADYLGEIIGTTAREDLLDRIFSDF
type: DOMAIN
name: MnmE_helical
description: MnmE, helical domain

phrase: GLKVAIVGRPNVGKSSLLNALLNQERAIVSNIPGTTRDTIEETLQLGGFTCRLIDTAGLRETADELESIGVARSKKAIAAADLVLVVVDLQTGIQDEDRRVLESVRDKVLIIIGNKLDLVAHDINKKLADLESFAGNYPRVAVSALKGKGLDELARKVQEIV
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain

phrase: EGLKVAIVGRPNVGKSSLLNALLNQERAIVSNIPGTTRDTIEETLQLGGFTCRLIDTAGLRETADELESIGVARSKKAIAAADLVLVVVDLQTGIQDEDRRVLESVRDKVLIIIGNKLDLVAHDINKKLADLESFAGNYPRVAVSALKGKGLDELARKVQEI
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain

phrase: KVAIVGRPNVGKSSLLNALLNQERAIVSNIPGTTRDTIEETLQLGGFTCRLIDTAGLRETADELESIGVARSKKAIAAADLVLVVVDLQTGIQDEDRRVLESVRDKVLIIIGN
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: TIAALATPPGEGGISIIRLSGSQAIAIVAKVFKPVKGPDLTTTRSHTLRLGFIIDPVSGESLDEVLVSVMRAPHSYTAEDVVEINCHGGALATSRVLQLVLRTGARLAEPGEFTRRAFLNG
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal
Protein sequence:
MDPQGILKAFPKRKKIHADPSSNALAKIPKREAGDARGWLSSLRAHIMPTGIGRARAELFEKQIIQHGGQVCSAQAPGVTHIVVDEGMDYERALRLLRLPQLPPGAQLVKSAWLSLCLQEKKLTDTDGFSLSSPKRSLNEPQPSKSGQDASAPGTQGVLPRTTLSLSPPCTRAVSPPPKAEKPPKTQTQLSSEDEASDGEGPQVSSADLQALISGHYPTPPGEDGGPDPAPEALGKWVCAQPSSQKATNYNLHITEKLEVLAKAYNVQGDKWRALGYAKAINALKSFHKPVSSYQEACSIPGVGRRMAEKVMEILESGHLRKLDHISDSVPVLELFSNIWGAGTKTAQMWYHQGFRSLEDIRGLASLTAQQAIGLKHYDDFLDRMPREEAAEIEQMVRVSAQAFNPGLLCVACGSFRRGKVTCGDVDVLITHPDGRSHQGIFSPLLDSLRQQGFLTDDLVSQEENGQQQKYLGVCRLPGAGQRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSAAVVRNSQGVKVGAGQVLPTPTEKDVFKLLGLPYREPAERDW

Annotated regions:
phrase: LFSNIWGAGTKTAQMWYHQGFRSLEDIRGLASLTAQQAIGLKHYDD
type: DOMAIN
name: DNA_pol_lambd_fingers_domain
description: DNA polymerase lambda, fingers domain

phrase: GSFRRGKVTCGDVDVLITH
type: BINDING_SITE
name: DNA_pol-X_BS
description: DNA polymerase family X, binding site

phrase: ALLYFTGSAHFNRSMRALAKTKGMSLSEHALSAAVVRNSQGVKVGAGQVLPTPTEKDVFKLLGLPYREPAE
type: DOMAIN
name: PolB_thumb
description: DNA polymerase beta, thumb domain

phrase: NLHITEKLEVLAKAYNVQGDKWRALGYAKAINALKSFHKPVSSYQEACSIPGVGRRMAEKVMEIL
type: DOMAIN
name: DNA_pol_b-like_N
description: DNA polymerase beta-like, N-terminal domain

phrase: HITEKLEVLAKAYNVQGDKWRALGYAKAINALKSFHKPVSSYQEACSIPGVGRRMAEKVMEILESGHLRKLDHISDSVPVLELFSNIWGAGTKTAQMWYHQGFRSLEDIRGLASLTAQQAIGLKHYDDFLDRMPREEAAEIEQMVRVSAQAFNPGLLCVACGSFRRGKVTCGDVDVLITHPDGRSHQGIFSPLLDSLRQQGFLTDDLVSQEENGQQQKYLGVCRLPGAGQRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSAAVVRNSQGVKVGAGQVLPTPTEKDVFKLLGLPYREPAE
type: DOMAIN
name: DNA-dir_DNA_pol_X
description: DNA-directed DNA polymerase X

phrase: RMPREEAAEIEQMVRVSAQAFNPGLLCVACGSFRRGKVTCGDVDVLITHPDGRSHQGIFSPLLDSLRQQGFLTDDLVSQEENGQQQKYLGVCRLPGAGQRHRRLDIIVV
type: DOMAIN
name: DNA_pol_B_palm_palm
description: DNA polymerase beta, palm domain

phrase: DARGWLSSLRAHIMPTGIGRARAELFEKQIIQHGGQVCSAQAPGVTHIVVDEGMDYERALRLLRLPQLPPGAQLVKSAWLSLCLQEKKLTDTDGFS
type: DOMAIN
name: BRCT_dom
description: BRCT domain

phrase: NYNLHITEKLEVLAKAYNVQGDKWRALGYAKAINALKSFHKPVSSYQEACSIPGVGRRMAEKVMEILESGHLRKLDHISDSVPVLELFSNIWGAGTKTAQMWYHQGFRSLEDIRGLASLTAQQAIGLKHYDDFLDRMPREEAAEIEQMVRVSAQAFNPGLLCVACGSFRRGKVTCGDVDVLITHPDGRSHQGIFSPLLDSLRQQGFLTDDLVSQEENGQQQKYLGVCRLPGAGQRHRRLDIIVVPYSEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSAAVVRNSQGVKVGAGQVLPTPTEKDVFKLLGLPYREPAER
type: DOMAIN
name: DNA-dir_DNA_pol_X
description: DNA-directed DNA polymerase X
Protein sequence:
MSSAKRSTSRVSKKKAAPAKDGAPKKREQSTRYKYVELNKASLTSAEAQHFYGVVIDATFPYKTNQERYICSLKVVDPSLYLKSQKGTGDASDYATLVLYAKRFEDLPIIHRIGDIIRVHRATLRLYNGQRQFNANVFYNSSWALFSTDKKSALQEIGGQEPASDLTPFAFSGKNYTFEKSEAALLQNIRKWAVQYFQQYNVISSDMFTPLNKAQAQKGDFDVVAKILQVFELDEYTNELKLKDQSGQVFYTLALKLKFPHLRAGEVVRIRSATYDETSTQKKVLLLSHYSNIVTFVSASKLAKEVKAKVTDDKSVEKAALKQDVSLSAVVLTEVDKKHAGLPTHSLQDLFHNADTDKEISSKDTFRTQFYITRVEPVDVKEWVKSYDRKTKKPSSHKGAGAKGGENIFQVQFLVKDASTQLNNNTYRVLLYTQDGLGANFFNVKPDNLYKNNDARKKLEEYNELLTKFNSYVDAVVERRNGFYFIKDTRIIF

Annotated regions:
phrase: YVELNKASLTSAEAQHFYGVVIDATFPYKTNQERYICSLKVVDPSLYLKSQKGTGDASDYATLVLYAKRFEDLPIIHRIGDIIRVHRATLRLYNGQRQFNANVFYNSSWALFSTDKKSALQEIGGQEPASDLTPFAFSGKNYTFEKSEAALLQNIRKWA
type: DOMAIN
name: Telomer_end-bd_POT1/Cdc13
description: Telomeric single stranded DNA binding POT1/Cdc13

phrase: KAQAQKGDFDVVAKILQVFELDEYTNELKLKDQSGQVFYTLALKLKFPHLRAGEVVRIRSATYDETSTQKKVLLLSHYSNIVTFVSASKLAKEV
type: DOMAIN
name: TEBP-like_OB2
description: Telomere end-binding protein alpha subunit-like, OB2 domain

phrase: YVELNKASLTSAEAQHFYGVVIDATFPYKTNQERYICSLKVVDPSLYLKSQKGTGDASDYATLVLYAKRFEDLPIIHRIGDIIRVHRATLRLYNGQRQFNANVFYNSSWALFSTDKKSALQEIGGQEPASDLTPFAFSGKNYTFEKSEAALLQNIRKW
type: DOMAIN
name: Telomer_end-bd_POT1/Cdc13
description: Telomeric single stranded DNA binding POT1/Cdc13

phrase: SVEKAALKQDVSLSAVVLTEVDKKHAGLPTHSLQDLFHNADTDKEISSKDTFRTQFYITRVEPVDVKEWVKSYDRKTKKPSSHKGAGAKGGENIFQVQFLVKDASTQLNNNTYRVLLYTQDGLGANFFNVKPDNLYKNNDARKKL
type: DOMAIN
name: Telomer_end-bd_POT1/Cdc13
description: Telomeric single stranded DNA binding POT1/Cdc13
Protein sequence:
MQDDRIIRETGAAARVAAIVMPVLDALGYRLVRVRLSAQDGLTLQIMAERPDGTMTVDDCEEVSRAVSPALDVEDPIDSAYQLEISSPGIDRPLVRLSDFQAALGHLAKVETSVMVDGRKRFRGQIVGCTGETLTIERDKVAEGEAPLAEIPLDAISDAKLVLTDALIREALKKDKEERRQRKKARRRGEKGGVGDDGTAGEEQPDSAREGPARSASEGE

Annotated regions:
phrase: GIDRPLVRLSDFQAALGHLAKVETSVMVDGRKRFRGQIVGCTGETLTIERDKVAEGEAPLAEIPLDAISDAKLVLT
type: DOMAIN
name: RimP_C
description: Ribosome maturation factor RimP, C-terminal

phrase: IVMPVLDALGYRLVRVRLSAQDGLTLQIMAERPDGTMTVDDCEEVSRAVSPALDVEDPIDSAYQLEISSPGI
type: DOMAIN
name: RimP_N
description: Ribosome maturation factor RimP, N-terminal

phrase: LVRLSDFQAALGHLAKVETSVMVDGRKRFRGQIVGCTGETLTIERDKVAEGEAPLAEIPLDAISDAKLVL
type: DOMAIN
name: RimP_C
description: Ribosome maturation factor RimP, C-terminal
Protein sequence:
MEIILKEDIVNLGYKNDIVNVKSGYGRNYLIPTGKAIIASPSAKKMLAEDLKQRAHKLEKIKKDAEALAAKLEGVSLTIATKVSSTGTIFGSVSNIQIAEALAKLGHEIDRKIIVVKDAVKEVGNYKAIVKLHKEVSVEIPFEVVAE

Annotated regions:
phrase: MEIILKEDIVNLGYKNDIVNVKSGYGRNYLIPTGKAIIASPSAKKM
type: DOMAIN
name: Ribosomal_bL9_N
description: Large ribosomal subunit protein bL9, N-terminal

phrase: GYKNDIVNVKSGYGRNYLIPTGKAIIA
type: DOMAIN
name: Ribosomal_bL9_N
description: Large ribosomal subunit protein bL9, N-terminal

phrase: DAEALAAKLEGVSLTIATKVSSTGTIFGSVSNIQIAEALAKLGHEIDRKIIVVKDAVKEVGNYKAIVKLHKEVSVEIPFEVV
type: DOMAIN
name: Ribosomal_bL9_C
description: Large ribosomal subunit protein bL9, C-terminal
Protein sequence:
MKPWILGLTGGIGSGKSAVVEQFGRLGVHWVDADHAARWVVEPGKPALARIAEHFGDGVLTPAGELDRAVLRARVFENAGERRWLEQLLHPLIRQEIAEHLSRAQSPYAILVSPLLIEAGQYRQADRVLVVDVPESLQLQRAMRRDQASEAQIRAILKAQASREERLRHADDVLVNDRDRAWLEAEVARLHDFYLTLRGGQP

Annotated regions: