nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MTNSAPVTPRRDLADAPLLAAARGETPRHTPVWFMRQAGRSLPEYRKVREGIPMLQSCLTPDLVCEITAQPVRRHGVDAAILFSDIVLPLHAAGVGLDIVAGTGPVVAEPVRTAADVAALPSLAPEQVSKVGDAVGLLLDELGSTPLIGFAGAPFTLASYLVEGGPSRNHERTKALMHSEPATWHALLEKLADTTLTFLRTQLAAGVDAIQLFDSWAGALSLRDYREFVLPHSRRIFEGVAETPGAAGVPKIHFGVGTGELLGAMRSAGADVVGVDWRVPLDTAAQRLREAGPDQGAPVVQGNLDPAVLFAGWEAVEREVRRILAEGRAAGGHIFNLGHGVLPSTDPGVLTRVVELVHAESAR

Annotated regions:
phrase: IGFAGAPFTLASYLVE
type: DOMAIN
name: Uroporphyrinogen_deCOase
description: Uroporphyrinogen decarboxylase (URO-D)

phrase: PVWFMRQAG
type: DOMAIN
name: Uroporphyrinogen_deCOase
description: Uroporphyrinogen decarboxylase (URO-D)

phrase: APLLAAARGETPRHTPVWFMRQAGRSLPEYRKVREGIPMLQSCLTPDLVCEITAQPVRRHGVDAAILFSDIVLPLHAAGVGLDIVAGTGPVVAEPVRTAADVAALPSLAPEQVSKVGDAVGLLLDELGSTPLIGFAGAPFTLASYLVEGGPSRNHERTKALMHSEPATWHALLEKLADTTLTFLRTQLAAGVDAIQLFDSWAGALSLRDYREFVLPHSRRIFEGVAETPGAAGVPKIHFGVGTGELLGAMRSAGADVVGVDWRVPLDTAAQRLREAGPDQGAPVVQGNLDPAVLFAGWEAVEREVRRILAEGRAAGGHIFNLGHGVLPSTDPGVLTRVVELVH
type: DOMAIN
name: Uroporphyrinogen_deCOase
description: Uroporphyrinogen decarboxylase (URO-D)
Protein sequence:
MKEDCSPSSHVPISDSKFILKSELLSLLKTYNCYHEGRSFQLRHREEEGTLIIEGLLNIAWGLRRPIRLQMQDDRERVHLPSATWVPERLSYLQKDASPQDSKVPAEEPSTQPANKGEVSRDGSGPLQEEEEEVPQLMRTKSDASCIIQRRCKSRAPGEAQKIRRHRFSINGHFYNHKTSVFTPAYGSVTNVRVNSTMTTQQVLTLLLNKFRVEDGPSEFALYTVHESGEQTKLKDCEYPLISRILHGPCEKIVKIFLMEADLSEEVPHDVAQYIKFEMPVLDSFVEKLKEEEEREIIKLTMKFQALRLTMQQRLEQLVEAK

Annotated regions:
phrase: KFEMPVLDSFVEKLKEEEEREIIKLTMKFQALRLTMQQR
type: DOMAIN
name: SARAH_dom
description: SARAH domain

phrase: YNHKTSVFTPAYGSVTNVRVNSTMTTQQVLTLLLNKFRVEDGPSEFALYTVHESGEQTKLKDCEYPLISRILHGPCEKIVKIFLMEAD
type: DOMAIN
name: RA_dom
description: Ras-associating domain

phrase: HKTSVFTPAYGSVTNVRVNSTMTTQQVLTLLLNKFRVEDGPSEFALYTVHESGEQTKLKDCEYPLISRILHGPCEKIVKIFLM
type: DOMAIN
name: RA_dom
description: Ras-associating domain

phrase: NHKTSVFTPAYGSVTNVRVNSTMTTQQVLTLLLNKFRVEDGPSEFALYTVHESGEQTKLKDCEYPLISRILHGPCEKIVKIFLMEA
type: DOMAIN
name: RASSF4_RA
description: Ras association domain-containing protein 4, RA domain

phrase: HFYNHKTSVFTPAYGSVTNVRVNSTMTTQQVLTLLLNKFRVEDGPSEFALYTVHESGEQTKLKDCEYPLISRILHGPCEKIVKIFLMEAD
type: DOMAIN
name: RA_dom
description: Ras-associating domain

phrase: VAQYIKFEMPVLDSFVEKLKEEEEREIIKLTMKFQALRLTMQQRLEQ
type: DOMAIN
name: SARAH_dom
description: SARAH domain
Protein sequence:
MMKELHPELRENVRLLGELLGQSIRYHLGDEIFNKIEKIRIAAKADRNAEISQRKQLKEVLSGLNDEELAPVARAFNQFLNLTNIAEQYHIVRRRAPASELVDNRLDTIEVVFDRLIGQGVSKDKFFAQLADLNLEFVLTAHPTEITRRTLIQKYDQISECLESLDRSDLLDEEYAKIVERLRRLITEAWHTDEIRYERPTAVDEAKWGFAVIENSLWQAVPDFMRQMDAALLERFGEGLPINVNPVRFASWMGGDRDGNPNVTSEVTREVFLLSRWMAADLYLRDIEALRSELSMTACNGELARASGQSREPYRKILAKLRSRLEATRAWAAEALDSTKKPAAEVLLNNAELIEPLMVCYRSLRDCGMEVIANGPLLDVIRRAQCFGLQLVRLDIRQDSERHSDVMKEICAYLGIGDYSQWTEEEKQAFLIRELEGRRPLLPKEWPASAEAREVLDTCRVVAMQPPEGLASYVISMASDPSDVLTVILLLRESGMRHHIPIAPLFETLSDLQGAADSIGRLLDLPWYREYIGGKQEVMIGYSDSAKDAGQMAAAWAQYQAQEALVKVAAKHDVKLTLFHGRGGTVGRGGGPANRAILSQPPGSVAGNFRITEQGEMIRFKFGQPKVAKQSFNLYLGAVLEASLVPPPEPEPAWREMMDKLSHLAVNSYREVVRERPGFVEYFRSATPEQELGKLALGSRPARRKASGGVESLRAIPWIFAWTQMRLMLPAWLGSDTALQTAVDDGGADTLKAMLTGWPFFETHVDMLEMVLSKVDPEIARFYEERLVKPELHPLGDELRRRAGCAVRLINELKGQDELLLDNPVFMHSLQVRNPYTDPLHFLQVELLVRDRAEGETNKETVEKALKVTMAGVAAGMRNTG

Annotated regions:
phrase: VLTAHPTEITR
type: ACTIVE_SITE
name: PEP_COase_Lys_AS
description: Phosphoenolpyruvate carboxylase, Lys active site

phrase: VMIGYSDSAKDA
type: ACTIVE_SITE
name: PEPCASE_His_AS
description: Phosphoenolpyruvate carboxylase, His active site
Protein sequence:
MTHDKTCPCGSPKIYQDCCQILHLGLDSGAQLATSPEQLMRSRYCAFVLKNFDYIIKTHHAAYLDGLTLEQLQQGPHPEWLGLDVLSANDTTQPDGSKFGTVTFKAWYKMSGEIDAIYERSEFIFEQGRWFYTKGHQMHAKLPGRNDPCVCHSGKKFKQCCMKG

Annotated regions:
phrase: SPEQLMRSRYCAFVLKNFDYIIKTHHAAYLDGLTLEQLQQGPHPEWLGLDVLSANDTTQPDGSKFGTVTFKAWYKMSGEIDAIYERSEFIFEQGRWFYTK
type: DOMAIN
name: YchJ-like_M
description: YchJ-like, middle NTF2-like domain

phrase: RNDPCVCHSGKKFKQCCM
type: CONSERVED_SITE
name: SEC_C_motif
description: SEC-C motif
Protein sequence:
MRFTATAAALVASSIPATLGQHVRDLSNEKWTLSSDALNHTVPGNLPSHAHLDLLKAGVIDDPYHGLNDFNLRWIPESNWTYTTDKIKDLMPIEFCGKYVASTNNQYRQYSFDVSQILEGCNEDPILKIDFGSAPNIVNAIAEDRNSPVWPDGIQQTYEYPNRWFMRKEQSDFGWDWGPAFAPAGPWKPAYIVQLPKAQNIHVLNTDLDIYRKGQINHLPPDQSQPWVVNASIDFVGSLPPNPSMSIEFKDTKSGEILTSKRIGNVTVSGNSVTGVTVLGGVTPKLWWPLGLGDQNLYNITVTVTGHQNQTLAHVTKRTGFRTIFLNQRNITDAQLAQGIAPGANWHFEVNGHEFYAKGSNIIPPDAFWPRVTEARMARLFDAVVAGNQNMLRVWSSGIYLHDFIYDLADERGILLWSEFEFSDALYPVDDAFLDNIAAEVVYNVRRVNHHPSLALWAGGNEIESLMLPTVERKAPEEYAKYVGEYEKLYISLILPLVYQNTRSITYSPSSTTEGYLDVDLSAPVPMVERYHNTTPGSYYGDTDFYNYDSSVSFNSHVYPVGRFANEFGYHSMPSLQTWQQAVDPEDLHFNSTTVMLRNHHYPAGGTFTDNFHNTSLGMGEMTIAVQRYYPIPNKLDSVANFSAWCHATQLFQADMYKSEIQFYRRGSGMPERQLGSLYWQLEDIWQAPSWAGIEYGGRWKVLHYVSRDIYQRIIVSPFWNYTTGDLDLYVTSDLWESAKGKVNLTWLDLSGTPLPHNAGTPGSVPFNVGALNTTKIYSTNIKNLTLPNPKDAILVLSLSGEGHLPNSDKKTTFTHQNHFTPVFPKDLALVDPGLELSYNTKSKTFTVEAKSGVSLYTWLDYPADVVGYFDENAFVLLPGQKKEIGFTVQEDNTDGKWVQGVTVQSLWNQTLEK

Annotated regions:
phrase: MSIEFKDTKSGEILTSKRIGNVTVSGNSVTGVTVLGGVTPKLWWPLGLGDQNLYNITVTVTGHQNQTLAHVTKRTGF
type: DOMAIN
name: Glyco_hydro_2_Ig-like
description: Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich

phrase: WTLSSDALNHTVPGNLPSHAHLDLLKAGVIDDPYHGLNDFNLRWIPESNWTYTT
type: DOMAIN
name: Beta-mannosidase-like_N2
description: Beta-mannosidase-like, galactose-binding domain-like

phrase: KIKDLMPIEFCGKYVASTNNQYRQYSFDVSQILEGCNEDPILKIDFGSAPNIVNAIAEDRNSPVWPDGIQQTYEYPNRWFMRKEQSDFGWDWGPAFAPAGPW
type: DOMAIN
name: Beta-mannosidase-like_N2
description: Beta-mannosidase-like, galactose-binding domain-like

phrase: DLDLYVTSDLWESAKGKVNLTWLDLSGTPLPHNAGTPGSVPFNVGALNTTKIYSTNIKNLTLPNPKDAILVLSLSGEGHLPNSDKKTTFTHQNHFTPVFPK
type: DOMAIN
name: Mannosidase_ig
description: Mannosidase Ig/CBM-like domain

phrase: LVDPGLELSYNTKSKTFTVEAKSGVSLYTWLDYPADVVGYFDENAFVLLPGQKKEIGFTVQEDNTDGKWVQGVTVQSLW
type: DOMAIN
name: Beta-mannosidase_Ig
description: Beta-mannosidase, Ig-fold domain
Protein sequence:
MSSILSRYPEAETPVHGYFYSMVELAVVRVFVQHEIFDAIADDGTSIEELATKTGMEMNLLERLSNFLIASKVLSSPKPGFIGLPAETKMFQQRRAKLFYSHIFDAFMGSAVKWPQYLQTNGLAEPQKSNRSPFGLGAGYPDKSFYDVLDMMPERAQAFNSTMAIGLGDMPITGIYDFSWVTAHAGTDPKRTLIVDVGGGKGQAIKAIIEETPSIPASACVLQDLPNVIKDTPEEDGILRKVQKVGSSFFDKQSTRGALVYYIRRVLNDWPDDECVTILKNIREACASDSRLLISENLLPDEPSVSLAAADLWMMNFAGKRRNVRMFNDLASRSGFEISSIAKDKMSNSAVIEMLPVQS

Annotated regions:
phrase: TLIVDVGGGKGQAIKAIIEETPSIPASACVLQDLPNVIKDTPEEDGILRKVQKVGSSFFDKQSTRGALVYYIRRVLNDWPDDECVTILKNIREACASDSRLLISENLLPDEPSVSLAAADLWMMNFAGKRRNVRMFNDLASRSGF
type: DOMAIN
name: O_MeTrfase_dom
description: O-methyltransferase domain
Protein sequence:
MATLQQQKIRIRLKAFDRRLLDTSCDRIVETANRTNATAIGPIPLPTRRRIYCVLRSPHVDKDSREHFETRTHRRIIDIYQPSSKTIDALMKLDLPAGVDIEVKL

Annotated regions:
phrase: RIRLKAFDRRLLDTSCDRIVETANRTNATAIGPIPLPTRRRIYCVLRSPHVDKDSREHFETRTHRRIIDIYQPSSKTIDALMKLDLPAGVDIEV
type: DOMAIN
name: Ribosomal_uS10_dom
description: Small ribosomal subunit protein uS10 domain

phrase: ANRTNATAIGPIPLP
type: CONSERVED_SITE
name: Ribosomal_uS10_CS
description: Small ribosomal subunit protein uS10, conserved site

phrase: RIRLKAFDRRLLDTSCDRIVETANRTNATAIGPIPLPTRRRIYCVLRSPHVDKDSREHFETRTHRRIIDIYQPSSKTIDALMKLDLPAGVDIEV
type: DOMAIN
name: Ribosomal_uS10_dom
description: Small ribosomal subunit protein uS10 domain
Protein sequence:
MVILLQSLQKSAYGKEPWTLTQTSLETVRSAPANCFKKGPQNIEVMFDKDPENIMVYTVWTYIYYQTLDDTWNKVEGKIDYHGAYYLEGTLKVYYIQFEVDAARFGKTGIWEVHVNEDTIFAPVTSSSPAAGEGATSIDSAPESPANRQLSSTSVSSRKRTPPRTEARRYNRKESSPTTTTTRRQKRQGQRQEDTARRSRSTSRGRQEISRGGNQRRRRRSRETSISPAWGRGGRSRRGPTTRSQSKSLSRSRSRSKSRSRGSSPRGGISPADVGSSVRSLGRKHTGRLERLLEEARDPPVILLRGDANKLKCFRFRAKKKYQDLVKYYSTTWSWVGGTSNDRIGRSRLLLAFSSNTERELFIKIMKLPPGVDWSLGYLDDL

Annotated regions:
phrase: PVILLRGDANKLKCFRFRAKKKYQDLVKYYSTTWSWVGGTSNDRIGRSRLLLAFSSNTERELFIKIMKLPPGVDW
type: DOMAIN
name: Papillomavirus_E2_C
description: Papillomavirus E2, C-terminal

phrase: MVILLQSLQKSAYGKEPWTLTQTSLETVRSAPANCFKKGPQNIEVMFDKDPENIMVYTVWTYIYYQTLDDTWNKVEGKIDYHGAYYLEGTLKVYYIQFEVDAARFGKTGIWEVHVNEDTIFAP
type: DOMAIN
name: PPV_E2_N
description: Papillomavirus E2, N-terminal
Protein sequence:
MKLGRDIPIYKLIIIKNESIENNLKEISFSDNFKCQICEGLLISSLIPNRMKALQCINGHCFCLTCWESILEIKSECPTCRIQIQSMNTLSNNLFIIKSISESIKIHCPNYLNFDNSNNFNGCKEIITIDEIDRHESKCEFRFIKCSINNQCNEIIRFNERDKHESQCDFIIQKCTHCDESVQMKQMQGHILFECLKVLITCQHCSLQFTRLKLQNHIENHCKEIKIECPFKSLKIIYNNNNNDNDNNDSDENNSNQSLSSSSLSSSIIPLSPCNELMKRSELSKHFIRNHQYHNELVSIVLKKQENKIKKLETIIQQNNVNQNFEISIIKHSNSLTRDSFYKENKKKDKLIQDLMKRVLILEHQQQQNQIQNQIQNQIQKLSNKSIFTTTTTTTSTSDKNNNNNNNNNNNNNNNNEDEEDDDNIKNNDNQGNLKSLREMFNTISNFKDDENEQQQIQQQQQLPFTSFGPLSVQQQNNPTKQFNQLSQPQTQPQSQSQSQSLFGEWSPITINQNQNTPSNPFSIFSGTSL

Annotated regions:
phrase: CQICEGLLISSLIPNRMKALQCINGHCFCLTCWESILEIKSECPTC
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: HILFECLKVLITCQHCSLQFTRLKLQNHIENHCKEIKIECPFK
type: DOMAIN
name: Znf_TRAF
description: Zinc finger, TRAF-type
Protein sequence:
MDALTPRDSPKRDDSMATSAATAASAKPDALTIGKEGIVHGHIHNYNNLTYIHGHLHHSAPVNDSSASATPAAAAVADAATSAFASGASHDMGGDCHVNEKCKEYTDCQHFEFLNYHNNPSLTKYNDTATYNSNNHSFANNFHSVASDPTSPQQNSKSDLPRRKDSWFNDDLILLPSSKKNKPNPPPGSDDCYCTPKILEICCDETHPKSEANIKQGESDQPTKKDISENGNDVAIFTDVKNDHLMPNFNLHDQYCNSTNHDSHNHNNTVPDSFSQLMSHLSEIDCDLTCDTPCTASTSATSGHKFVQDHQSSNNDDVFHKYCKFCEESTDNQPCSKHMHLESKPPQLPPKCSSLRKPTNTLQGTNHAYHEHILNTDMDLKILEDLCNISSLYEVPFGKHINHHDHNNAGNGCDGSSTGNNENGNQTMNLLLSSINRCNPKNNLNGSNNNTAGATSTDHQHHHHRIQFHSHKPNRNNIVNNSGISAANTTADLTNNDLNDLISREYSYERFRNQSEPPSLPKVTHQNQKNRRSWPTKDLESTDFSSLEDSLPSSISPPIQTTSTINFNWCFKEEKNNDLKCKWKECPESCSSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTCSIVNHINCQHGINFDIQFANPDSFLPGSISKEKHHLLHCPNPQTHEVSKADGAPDMTSANDVSNIPPIKQPEQVICQWDGCNKSFSSAQELNDHLEAVHLTRGKSEYQCLWHDCHRTFPQRQKLIRHLKVHSKYKPY

Annotated regions:
phrase: LKCKWKECPESCSSLFDLQRHLLKDH
type: DOMAIN
name: Zap1-like_Znf1
description: Zap1-like, C2H2 zinc finger 1

phrase: YQCLWHDCHRTFPQRQKLIRHLKVHSKYK
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: VICQWDGCNKSFSSAQELNDHLEAV
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: CNWEDCDFLGDDTCSIVNHINCQ
type: DOMAIN
name: Zap1_Znf2
description: Zap1, zinc finger 2

phrase: YQCLWHDCHRTFPQRQKLIRHLKV
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: VICQWDGCNKSFSSAQELNDHLEAV
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: LACNWEDCDFLGDDTCSIVNHINCQ
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: LKCKWKECPESCSSLFDLQRHLLKD
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: YQCLWHDCHRTFPQRQKLIRHLKV
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: CQWDGCNKSFSSAQELNDHLEAV
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: CLWHDCHRTFPQRQKLIRHLKV
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type

phrase: CKWKECPESCSSLFDLQRHLLKD
type: DOMAIN
name: Znf_C2H2_type
description: Zinc finger C2H2-type
Protein sequence:
MLADWFSEQFSTGVLIVPCMLTLAIPGVLPRFKAEQMMPAIALIVSVIASVVIGGAGSLAFPLPALIWCAVRYTPQVTCLLTFVTGAVEIVLVANSVIDISVGSPFSIPQMFSARLGIATMAICPIMVSFSVAAINSLMKQVALRADFDFLTQVYSRSGLYEALKSPSLKQTQHLTVMLLDIDYFKSINDNYGHECGDKVLSVFARHIQKIVGDKGLVARMGGEEFAVAVPSVNPVDGLLMAEKIRKGVELQPFTWQQKTLYLTVSIGVGSGRASYRTLTDDFNKLMVEADTCLYRSKKDGRNRTSTMRYGEEVV

Annotated regions:
phrase: FDFLTQVYSRSGLYEALKSPSLKQTQHLTVMLLDIDYFKSINDNYGHECGDKVLSVFARHIQKIVGDKGLVARMGGEEFAVAVPSVNPVDGLLMAEKIRKGVELQPFTWQQKTLYLTVSIGVGSGRASYRTLTDDFNKLMVEADTCLYRSKKDGRN
type: DOMAIN
name: GGDEF_dom
description: GGDEF domain

phrase: ADFDFLTQVYSRSGLYEALKSPSLKQTQHLTVMLLDIDYFKSINDNYGHECGDKVLSVFARHIQKIVGDKGLVARMGGEEFAVAVPSVNPVDGLLMAEKIRKGVELQPFTWQQKTLYLTVSIGVGSGRASYRTLTDDFNKLMVEADTCLYRSKKDGRN
type: DOMAIN
name: GGDEF_dom
description: GGDEF domain

phrase: QHLTVMLLDIDYFKSINDNYGHECGDKVLSVFARHIQKIVGDKGLVARMGGEEFAVAVPSVNPVDGLLMAEKIRKGVELQPFTWQQKTLYLTVSIGVGSGRASYRTLTDDFNKLMVEADTCLYRSKKDGRNRTSTMR
type: DOMAIN
name: GGDEF_dom
description: GGDEF domain

phrase: INSLMKQVALRADFDFLTQVYSRSGLYEALKSPSLKQTQHLTVMLLDIDYFKSINDNYGHECGDKVLSVFARHIQKIVGDKGLVARMGGEEFAVAVPSVNPVDGLLMAEKIRKGVELQPFTWQQKTLYLTVSIGVGSGRASYRTLTDDFNKLMVEADTCLYRSKKDGRNRTST
type: DOMAIN
name: GGDEF_dom
description: GGDEF domain

phrase: ADFDFLTQVYSRSGLYEALKSPSLKQTQHLTVMLLDIDYFKSINDNYGHECGDKVLSVFARHIQKIVGDKGLVARMGGEEFAVAVPSVNPVDGLLMAEKIRKGVELQPFTWQQKTLYLTVSIGVGSGRASYRTLTDDFNKLMVEADTCLYRSKKDGRNRT
type: DOMAIN
name: GGDEF_dom
description: GGDEF domain
Protein sequence:
MGKKDKRWVLQRKNDHYYNLAKKRNYRSRATYKLFQLNEKFNLIKERNVVVDLGCAPGGWLQAARDIVGDKGFIVGIDLQTVKPLPYENVIAIKGDMTKEEILKQARDLLPEKPDVIICDASPNISGVWDVDHARSLELTTMALMTATKMLKKGGNFVVKVFQGDLFEKYVQLVSEYFDKAFTTKPRASRDESAEVYVIGKRFNGRKFDMNSKSPIVKLLDTNPKENEITSPSLRKDISKEDSGLMIKRIKEMRSKKE

Annotated regions:
phrase: YRSRATYKLFQLNEKFNLIKERNVVVDLGCAPGGWLQAARDIVGDKGFIVGIDLQTVKPLPYENVIAIKGDMTKEEILKQARDLLPEKPDVIICDASPNISGVWDVDHARSLELTTMALMTATKMLKKGGNFVVKVFQGDLFEKYVQLVSEYFDKAFTTKPRASRDESAEVYVIGKR
type: DOMAIN
name: RNA_MeTrfase_FtsJ_dom
description: Ribosomal RNA methyltransferase, FtsJ domain
Protein sequence:
MSYQFDSVEDVVNALKRGEMVVVTDDESRENEGDLIGAAAKATPEMVTFMVSHARGLLCVPLSTECADKLGLVNMSSAADPFRTAFTQSVDVIEGTTTGISAFDRAKTIAALIDPESRLNDFASPGHVFPLIAKSGGVLQRAGHTETAVDLARLAGLAPAGVICEIMNDDGSMSRVPELDVFRRKFGLKWCTVASLIEYRRRTENLVEKGEFANLPTEYGNFKICGFRSKIDGLEHVALIYGDVKGQEGVLTRVHSECLTGDVFASCRCDCGNQLHDAMKKIVEEGAGIIVYMRQEGRGIGIFNKINAYQLQDQGCDTVEANERLGFSDDLREYGIGVQIILALGVKSIRVLTNNPRKIIGLNGYGLEIVGRVPLISEYHKLACQYMQTKKEKMGHLI

Annotated regions:
phrase: ANLPTEYGNFKICGFRSKIDGLEHVALIYGDVKGQEGVLTRVHSECLTGDVFASCRCDCGNQLHDAMKKIVEEGAGIIVYMRQEGRGIGIFNKINAYQLQDQGCDTVEANERLGFSDDLREYGIGVQIILALGVKSIRVLTNNPRKIIGLNGYGLEIVGRV
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MKKIQVVVKDPVGIHARPASIIAGEANKFKSELKLVSPSGVEGNIKSIINLMSLGIKQNDHITIKAEGTDEEEALNAIKAVLEKHQVI

Annotated regions:
phrase: GIHARPA
type: PTM
name: PTS_HPr_His_P_site
description: Phosphotransferase system, HPr histidine phosphorylation site

phrase: GIHARPASIIAGEANK
type: DOMAIN
name: HPr-like
description: Phosphocarrier protein HPr-like

phrase: SGVEGNIKSIINLMS
type: DOMAIN
name: HPr-like
description: Phosphocarrier protein HPr-like

phrase: LGIKQNDHITIKAEGTD
type: DOMAIN
name: HPr-like
description: Phosphocarrier protein HPr-like

phrase: MKKIQVVVKDPVGIHARPASIIAGEANKFKSELKLVSPSGVEGNIKSIINLMSLGIKQNDHITIKAEGTDEEEALNAIKAVLEKHQV
type: DOMAIN
name: HPr-like
description: Phosphocarrier protein HPr-like

phrase: GVEGNIKSIINLMSL
type: PTM
name: PTS_HPr_Ser_P_site
description: Phosphotransferase system, HPr serine phosphorylation site

phrase: KIQVVVKDPVGIHARPASIIAGEANKFKSELKLVSPSGVEGNIKSIINLMSLGIKQNDHITIKAEGTDEEEALNAIKAVL
type: DOMAIN
name: HPr-like
description: Phosphocarrier protein HPr-like

phrase: MKKIQVVVKDPVGIHARPASIIAGEANKFKSELKLVSPSGVEGNIKSIINLMSLGIKQNDHITIKAEGTDEEEALNAIKAVL
type: DOMAIN
name: HPr-like
description: Phosphocarrier protein HPr-like

phrase: QVVVKDPVGIHARPASIIAGEANKFKSELKLVSPSGVEGNIKSIINLMSLGIKQNDHITIKAEGTDEEEALNAIKAV
type: DOMAIN
name: HPr-like
description: Phosphocarrier protein HPr-like
Protein sequence:
MGRVIRGQRKGAGSVFKAHVKHRKGAAKLRAIDFAERNGYIKGIVKDIIHDPGRGAPLAKVAFRDPYRFKKRTELFVAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCVEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAIVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAARRTGRLRGTKTVQEKEN

Annotated regions:
phrase: IGNVLPVGTMPEGTIVCCVEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAIVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPS
type: DOMAIN
name: Ribosomal_uL2_C
description: Large ribosomal subunit protein uL2, C-terminal

phrase: LNIGNVLPVGTMPEGTIVCCVEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAIVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAP
type: DOMAIN
name: Ribosomal_uL2_C
description: Large ribosomal subunit protein uL2, C-terminal

phrase: PRVRGVAMNPV
type: CONSERVED_SITE
name: Ribosomal_uL2_CS
description: Large ribosomal subunit protein uL2, conserved site

phrase: GSVFKAHVKHRKGAAKLRAIDFAERNGYIKGIVKDIIHDPGRGAPLAKVAFRDPYRFKKRTELFVAAEGIHTGQFVY
type: DOMAIN
name: Ribosomal_uL2_RNA-bd_dom
description: Large ribosomal subunit protein uL2, RNA-binding domain
Protein sequence:
MANPFRAEVKQLYKALLFLGREYPKGADYFRERLRAAFAKNKDMRDPDKIKQLISRGEFVVKELEALYYLRKYRALKKRYYEAE

Annotated regions:
phrase: RAEVKQLYKALLFLGREYPKGADYFRERLRAAFAKNKDMRDPDKIKQLISRGEFVVKELEALYYLRKYRALKK
type: DOMAIN
name: Complex1_LYR_ETFRF1_LYRM5
description: ETFRF1, LYR domain

phrase: EVKQLYKALLFLGREYPKGADYFRERLRAAFAKNKDMRDPDKIKQLISRGEF
type: DOMAIN
name: Complex1_LYR_dom
description: Complex 1 LYR protein domain
Protein sequence:
MSFVNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQHYQAISAQVAAYQQRFVLALSQAGSTYAVAEAASATPLQNVLDAINAPVQSLTGRPLIGDGANGIDGTGQAGGNGGWLWGNGGNGGSGAPGQAGGAGGAAGLIGNGGAGGTGGAVSLARAGTAGGAGRGPVGGIGGAGGVGGAGGAAGAVTTITHASFNDPHGVAVNPGGNVYVTNFGSGTVSVINPATNTVTGSPITIGNGPSGVAVSPVTGLVFVTNFDSNTVSVIDPTTNTVTGSPITVGTAPTGVAVNPVTGEVYVTNFAGDTVSVIS

Annotated regions:
phrase: IGDGANGIDGTGQAGGNGGWLWGNGGNGGSGAPGQAGGAGGAAGLIGNGGAGGTGGAVSLARAGTAG
type: REPEAT
name: PGRS_rpt
description: PGRS repeats

phrase: FNDPHGVAVNPGGNVYVTNFGSGTVSVINP
type: REPEAT
name: NHL_repeat
description: NHL repeat

phrase: GLVFVTNFDSNTVSVIDPTTNTVTGSPITVGTAPTGVAV
type: REPEAT
name: YVTN_b-propeller_repeat
description: YVTN beta-propeller repeat

phrase: GGNVYVTNFGSGTVSVINPATNTVTGSPITIGNGPSGVAV
type: REPEAT
name: YVTN_b-propeller_repeat
description: YVTN beta-propeller repeat

phrase: VNVAPQLVSTAAADAARIGSAINTANTAAAATTQVLAAAQDEVSTAIAALFGSHGQHYQAISAQVAAYQQRFVLALSQAGSTYAVAEA
type: DOMAIN
name: PE-PGRS_N
description: PE-PGRS family, N-terminal

phrase: FNDPHGVAVNPGGNVYVTNFGSGTVS
type: REPEAT
name: NHL_repeat
description: NHL repeat
Protein sequence:
MRVPAAVTGGCGCGVDGGGGCCRGGGKLADWEEGKDDEMKSVVVKGWTRMAQVVPLHDNASAEDDDDDEEDDDEDDDDDDDEDDEEEAAPPYVMAVDDSSVDRAVITALLRRSKYRVTAVDSGKRALEILGSEPNVSMIITDYWMPEMTGYDLLKKIKESSELKQIPVVIMSSENVPTRISRCLEEGAEDFLLKPVRPADISRITSRMLQ

Annotated regions:
phrase: YVMAVDDSSVDRAVITALLRRSKYRVTAVDSGKRALEILGSEPNVSMIITDYWMPEMTGYDLLKKIKESSELKQIPVVIMSSENVPTRISRCLEEGAEDFLLKPVRPADISRITSRM
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: PYVMAVDDSSVDRAVITALLRRSKYRVTAVDSGKRALEILGSEPNVSMIITDYWMPEMTGYDLLKKIKESSELKQIPVVIMSSENVPTRISRCLEEGAEDFLLKPVRPADISRI
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: VMAVDDSSVDRAVITALLRRSKYRVTAVDSGKRALEILGSEPNVSMIITDYWMPEMTGYDLLKKIKESSELKQIPVVIMSSENVPTRISRCLEEGAEDFLLKPVRPADI
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain
Protein sequence:
MERRTKIVCTLGPAVASADGILRLVQDGMDVARLNFSHGDHPDHEQNYKWVREATDKTGRAVGILADLQGPKIRLGRFKEGSTVWETGETVRITVDDVEGTHDRVSTTYKNLAKDARPGDRLLVDDGKVGLVCVSVEGNDVICEVTEGGPVSNNKGVSLPGMDISVPALSEKDIKDLRFALKLGVDFIALSFVRSPADVELVHAIMDEEGRRVPVIAKLEKPEAVAALESIVLAFDAIMVARGDLGVEVPLEEVPLVQKRAIQIARENAKPVIVATQMLDSMIENSRPTRAEASDVANAVLDGADAVMLSGETSVGKDPHNVVRTMSRIVRFAETDGRVPDLTHIPRTKRGVISYSARDIAERLNARALVAFTTSGDTAKRLARLHSHLPLLVFTPDPSVRSQLALTWGAQTFLCPKVDDTDGMMREVDRALLAMDEYQKDDMMVVVAGSPPGVTGNTNMIHVHLLGEDTRIPK

Annotated regions:
phrase: ISYSARDIAERLNARALVAFTTSGDTAKRLARLHSHLPLLVFTPDPSVRSQLALTWGAQTFLCPKVDDTDGMMREVDRALLAMDEYQKDDMMVVVAGSPPGVTGNTNMIHV
type: DOMAIN
name: Pyrv_Knase_C
description: Pyruvate kinase, C-terminal

phrase: VPVIAKLEKPEA
type: ACTIVE_SITE
name: Pyrv_Knase_AS
description: Pyruvate kinase, active site

phrase: RRTKIVCTLGPAVASADGILRLVQDGMDVARLNFSHGDHPDHEQNYKWVREATDKTGRAVGILADLQGPKIRLGRFKEGSTVWETGETVRITVDDVEGTHDRVSTTYKNLAKDARPGDRLLVDDGKVGLVCVSVEGNDVICEVTEGGPVSNNKGVSLPGMDISVPALSEKDIKDLRFALKLGVDFIALSFVRSPADVELVHAIMDEEGRRVPVIAKLEKPEAVAALESIVLAFDAIMVARGDLGVEVPLEEVPLVQKRAIQIARENAKPVIVATQMLDSMIENSRPTRAEASDVANAVLDGADAVMLSGETSVGKDPHNV
type: DOMAIN
name: Pyrv_Knase_brl
description: Pyruvate kinase, barrel
Protein sequence:
MAELSLAELREIMRQSLGEDEVPDLADADTVTFEDLGLDSLAVLETVNHIERTYGVKLPEEELAEVRTPHSMLIFVNERLRAAA

Annotated regions:
phrase: DLGLDSLAVLETVNH
type: PTM
name: Ppantetheine_attach_site
description: Phosphopantetheine attachment site

phrase: LAELREIMRQSLGEDEVPDLADADTVTFEDLGLDSLAVLETVNHIERTYGVKLPEEELAEVRTPHSMLIFVNER
type: DOMAIN
name: PKS_PP-bd
description: Polyketide synthase-like, phosphopantetheine-binding domain

phrase: ELREIMRQSLGEDEVPDLADADTVTFEDLGLDSLAVLETVNHIERTYGVKLPEEELAEVRTPHSM
type: DOMAIN
name: PP-bd_ACP
description: Phosphopantetheine binding ACP domain

phrase: ELSLAELREIMRQSLGEDEVPDLADADTVTFEDLGLDSLAVLETVNHIERTYGVKLPEEELAEVRTPHSMLIFVNER
type: DOMAIN
name: PP-bd_ACP
description: Phosphopantetheine binding ACP domain
Protein sequence:
MPIGVPKVPFQIPGEEDASWVDVYNRLYRERLLFLGQEVDSDISNQLIGLMVYLSIEDDTKEIYLFINSPGGWVIPGVAIYDTMQFVRPEVHTICMGLAASMGSFLLVGGEITKRLAFPHARVMIHQPASYFFGAQTGEFILEAEELLKLRETLTRVYVQRTGKPLWVISEDMERDVFMSAKDAQAYGIVDLVAVE

Annotated regions:
phrase: TICMGLAASMG
type: ACTIVE_SITE
name: ClpP_Ser_AS
description: ClpP, Ser active site

phrase: RLAFPHARVMIHQ
type: ACTIVE_SITE
name: ClpP_His_AS
description: ClpP, histidine active site
Protein sequence:
MSKRLESKYKINRRLGVNLWGRAKSPVNRREYGPGQHGQRRKQKPSDFSIQLMAKQKLKGYYGNISEKQFRKYYDEAVRRKGDTSENLIGLLERRLDAVVYRLKFAITPFASRQFISHGHVTVNGKKVNIPSYLVKEGDVIEVRDSSKQLAIVLDAVQTGERDTPEYVEVDHRQMKGTFLRTPVLSDVPYPVQMEPNLVVEFYSR

Annotated regions:
phrase: KRLESKYKINRRLGVNLWGRAKSPVNRREYGPGQHGQRRKQKPSDFSIQLMAKQKLKGYYGNISEKQFRKYYDEAVRRKGDTSENLIGLL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: ESKYKINRRLGVNLWGRAKSPVNRREYGPGQHGQRRKQKPSDFSIQLMAKQKLKGYYGNISEKQFRKYYDEAVRRKGDTSENLIGLL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: RRLDAVVYRLKFAITPFASRQFISHGHVTVNGKKVNIPSYLVKEGDVIEVRDSSKQLAIVLDAV
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: LERRLDAVVYRLKFAITPFASRQF
type: CONSERVED_SITE
name: Ribosomal_uS4_CS
description: Small ribosomal subunit protein uS4, conserved site

phrase: RRLDAVVYRLKFAITPFASRQFISHGHVTVNGKKVNIPSYLVKEGDV
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain
Protein sequence:
MIVVFVGTAGSGKTTLTGEFGRYLEDNYKVAYVNLDTGVKELPYEPSIDVREFVTVEEIMREGYGPNGAIVESYDRLMEKFNEYLNKILRLEKENDYVLIDTPGQMETFLFHEFGVRLMENLPYPLVVYISDPEILKKPNDYCFVRFFALLIDLRLGATTIPALNKVDLLSEEEKERHRKYFEDIDYLTARLKLDPSMQGLMAYKMCSMMTEVLPPVRVLYLSAKTREGFEDLETLAYEHYCTCGDLT

Annotated regions:
Protein sequence:
MSGRRRAYPQPQYATGPAEMATPPAPNQFQQQQPVQQPVQQYGVDQMQGQFQQMNVGGVGPTGVPPAPQYSYQQPGQPQQSPQLSYDPYQPQPQANTGVYGQGMGGVPPSAVPAGGAGYGGYGQQNNIGLGAQLNALYTTDLSRDLPPPIAELSFQPPPITLPDNATLIPASKTANATPEYFRSTLNVVPTNSSLLKKSKLPLAIVVNPYNALKIENENVPVTCDTVISRCRRCRGYINPFVTLAENGRRWRCNFCNLLNDIPSAFDYDEISGQVKNKFDRVELNHSVVEFIAPKEYMARAPQPIVYTFIIDVSVHAIQSGLTGTITRTILESLDRIPNENKTARVSFIGVDSNLHYIRFNEGLEGTEILVVADIDEPFLPSPGGLLVNLDENREAIEKLLLDFPSYFENNANQGFALGPALKAGHKMISNIGGKLVCFAATLPNIGEGKLSVRDEASVAGKAKEAKALLAPADSFYKSFAVTCNSSQVTVDLFLTSSAYQDVATLSNLARYTAGQTHFYPAWTSNKYEDVAKLSKEVSDHLSQDIALEAVLRVRGSTGFRMSSFYGNFFNRSSDLCSFPTFPRDQSYLIEMSIEETINKPVVYFQAAVLHSTCFGERRIRVMNLALPTSSKLVDIYASADQLAIANYFTHKAIEKALSSSLPEAREYLIARVVDILNVYRKELVAGNVSGASPLQISTNLRMLPLLLFCLTKHLAFRGERVPSDHRAAALNNLGSSPIPQLIKSIYPTVYSLHNMPDTCGLPGVKEDEDDEEGAGAEIDVVLPDPINDSKASWENYGLYLIDNGSELFLWVSGNVVPGLVQDLFGTENLYEIPTGKTELPEFSLEESEFNYRVRQIIGKIREQNDSIIWKNLYVVVGASSNEPIEISQQRDLMALRMWASSCLVEDKTGSEPSYRDFLTSLKSKVSQ

Annotated regions:
phrase: DQLAIANYFTHKAIEKALSSSLPEAREYLIARVVDILNVYRKELVAGNVSGASPLQISTNLRMLPLLLFCLTKHLAFRGERVPSDHRAAALNNLGSSPIPQL
type: DOMAIN
name: Sec23/24_helical_dom
description: Sec23/Sec24, helical domain

phrase: LEAVLRVRGSTGFRMSSFYGNFFNRSSDLCSFPTFPRDQSYLIEMSIEETINKPVVYFQAAVLHSTCFGERRIRVMNLALPT
type: DOMAIN
name: Sec23_24_beta_S
description: Sec23/Sec24 beta-sandwich

phrase: ISRCRRCRGYINPFVTLAENGRRWRCNFCNLLNDIPS
type: DOMAIN
name: Znf_Sec23_Sec24
description: Zinc finger, Sec23/Sec24-type

phrase: VLPDPINDSKASWENYGLYLIDNGSELFLWVSGNVVPGLVQDLFGTENLYEIPTGKTELPEFS
type: DOMAIN
name: Gelsolin-like_dom
description: Gelsolin-like domain

phrase: PQPIVYTFIIDVSVHAIQSGLTGTITRTILESLDRIPNENKTARVSFIGVDSNLHYIRFNEGLEGTEILVVADIDEPFLPSPGGLLVNLDENREAIEKLLLDFPSYFENNANQGFALGPALKAGHKMISNIGGKLVCFAATLPNIGEGKLSVRDEASVAGKAKEAKALLAPADSFYKSFAVTCNSSQVTVDLFLTSSAYQDVATLSNLARYTAGQTHFYPAWTSNKYEDVAKLSKEV
type: DOMAIN
name: Sec23/24_trunk_dom
description: Sec23/Sec24, trunk domain