nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MFHNTCGRKGRFARAMGMALAISVTLSGCSTVSDWFADEEELEIRRLKPIDAKFTPSVKWDRDIGDGVDHYFSRLRPVYAYENLYAADRHGSVVAMNPENGDVLWERDFAVFEGDGWWDSIARLWRSGASARIGGISVADRLLFVGTENGVVMALDYETGETKWEASVPGEVLAAPSADEGILVVNTGAGTLFGFDTRTGEQLWRHEGDTPPLTLRGISGPVAANGGALIGTPTGKLQVNLLESGILAWETVIATPTGATELERIVDLDTTPVLFGGTIYTVSYNGTLAAVELRSGRIIWKREYGSYRNLSIEGNSIFVVDNNSNIYALDRRNGVELWSQGSLKSRSVTAATPVGEHIVVGDNWGFVHWIEQETGQIVARVDVGGDDEDDAIYDAPLNVDGVVVTMTRNGVVAAISTL

Annotated regions:
phrase: GISVADRLLFVGTENGVVMALDYETGETKWEA
type: REPEAT
name: PQQ_b-propeller_rpt
description: Pyrrolo-quinoline quinone beta-propeller repeat

phrase: AATPVGEHIVVGDNWGFVHWIEQETGQIVARV
type: REPEAT
name: PQQ_b-propeller_rpt
description: Pyrrolo-quinoline quinone beta-propeller repeat

phrase: PVLFGGTIYTVSYNGTLAAVELRSGRIIWKR
type: REPEAT
name: PQQ_b-propeller_rpt
description: Pyrrolo-quinoline quinone beta-propeller repeat

phrase: APSADEGILVVNTGAGTLFGFDTRTGEQLWRH
type: REPEAT
name: PQQ_b-propeller_rpt
description: Pyrrolo-quinoline quinone beta-propeller repeat

phrase: PVYAYENLYAADRHGSVVAMNPENGDVLWER
type: REPEAT
name: PQQ_b-propeller_rpt
description: Pyrrolo-quinoline quinone beta-propeller repeat

phrase: LSIEGNSIFVVDNNSNIYALDRRNGVELWSQ
type: REPEAT
name: PQQ_b-propeller_rpt
description: Pyrrolo-quinoline quinone beta-propeller repeat

phrase: ARLWRSGASARIGGISVADRLLFVGTENGVVMALDYETGETKWEASVPGEVLAAPSADEGILVVNTGAGTLFGFDTRTGEQLWRHEGDTPPLTLRGISGPVAANGGALIGTPTGKLQVNLLESGILAWETVIATPTGATELERIVDLDTTPVLFGGTIYTVSYNGTLAAVELRSGRIIWKREYGSYRNLSIEGNSIFVVDNNSNIYALDRRNGVELWS
type: REPEAT
name: PQQ_repeat
description: Pyrrolo-quinoline quinone repeat
Protein sequence:
MRIGILTGGGDCAGLNQAIRAAVMRSLDFGNECLGVLEGWRGLIEGKTTSLGLKEVEGIIEKSGTILGTSRTNPYQEEEGAKKVKENIKKLGLEALVAMGGEDTLGVARKLFEEGVKVVGVPKTMDNDLSATDYTFGFDSSVTRALEAASVLIDTGRSHRRVMILEVMGRHAGWVALFTGIASGADWILLPERKPEIEEMIKHIRAVHSRKNYALIVTSEGITLPEQKVGAEDQDKFGHMILKKRKMGETLAKLVEEKTGLEARVLVIGHMQRGGVPSLFDRILATRCGVKAAELVKEGKFGQMVALRGNEIVEVSLKEATAKLKLVDDAWWNFAKVFFK

Annotated regions:
phrase: RIGILTGGGDCAGLNQAIRAAVMRSLDFGNECLGVLEGWRGLIEGKTTSLGLKEVEGIIEKSGTILGTSRTNPYQEEEGAKKVKENIKKLGLEALVAMGGEDTLGVARKLFEEGVKVVGVPKTMDNDLSATDYTFGFDSSVTRALEAASVLIDTGRSHRRVMILEVMGRHAGWVALFTGIASGADWILLPERKPEIEEMIKHIRAVHSRKNYALIVTSEGITLPEQKVGAEDQDKFGHMILKKRKMGETLAKLVEEKTGLEARVLVIGHMQRGGVPSLFDRILATRCGVKAAE
type: DOMAIN
name: Phosphofructokinase_dom
description: Phosphofructokinase domain

phrase: RVLVIGHMQRGGVPSLFD
type: CONSERVED_SITE
name: Phosphofructokinase_CS
description: Phosphofructokinase, conserved site
Protein sequence:
MIFELSRANVADNSGAKQVGVIRVLGGSKKKVAEIGDVVICSVKKALPSGDVKAGQVLKAVVVRTKRNTYRSNGSYIRFDDNAVVILKDDGTPVGTRVFGPVAREIREKYPKIVSLALEVL

Annotated regions:
phrase: AVVVRTKRNTYRSNGSYIRFDDNAVV
type: CONSERVED_SITE
name: Ribosomal_uL14_CS
description: Large ribosomal subunit protein uL14, conserved site
Protein sequence:
MSRIVLGVAGGIAAYKACLLLRLFTEAGHDVHVVPTANALSFVGETTWAALSGNVVHTSVFADTHEVPHVRLGREADLVVVAPATADLLARAASGRADDLLSSVLLTASCPVVMAPAMHTEMWLHPATQANVATLRSRGVVVLRPAEGRLTGADSGPGRLPEPEDIEASALACLADRDAALRMAAQDLAGQKVVVSAGGTREALDPVRFVGNSSSGLMGVALARAAVQRGADVTLVAANLAVEPPAGVGVVPVVSTSELAAAMHAHAPDADLVVMAAAPADFTPANPSGTKLKKSGDAGLVVEFTQTTDVLAGLAARRPDGQVVVGFAAETAVDEADLVRLGTEKLARKGCQLLVLNDVSGGAVFGAPDNRVLLLGASGLLGRAVGSKTSVAHAIVDAAQSLRER

Annotated regions:
phrase: LAGQKVVVSAGGTREALDPVRFVGNSSSGLMGVALARAAVQRGADVTLVAANLAVEPPAGVGVVPVVSTSELAAAMHAHAPDADLVVMAAAPADFTPANPSGTKLKKSGDAGLVVEFTQTTDVLAGLAARRPDGQVVVGFAAETAVDEADLVRLGTEKLARKGCQLLVLNDVSGGAVFGAPDNRVL
type: DOMAIN
name: DNA/pantothenate-metab_flavo_C
description: DNA/pantothenate metabolism flavoprotein, C-terminal

phrase: RIVLGVAGGIAAYKACLLLRLFTEAGHDVHVVPTANALSFVGETTWAALSGNVVHTSVFADTHEVPHVRLGREADLVVVAPATADLLARAASGRADDLLSSVLLTASCPVVMAPAMHTEMWLHPATQANVATLRSRGVVVLRPAEGRLTGADSGPGRLPEPEDIE
type: DOMAIN
name: Flavoprotein
description: Flavoprotein
Protein sequence:
MKFVDEAVIKVQAGDGGSGCVSFRREKYIPDGGPDGGDGGDGGSVYLVADASLNTLIDYRFERFYLAERGENGRGRDCTGKGGSDLTLRVPVGTRAVDIDTDEVLGDLTEVGQKLLVAKGGFHGLGNTRFKSSVNRAPRQKTLGTKGEVRELRLELLLLADVGLLGMPNAGKSTFIRAVSRATPKVADYPFTTLVPNLGVVNPRPGQSFVIADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHILDIEPIDGSSPAESARAIVAELEKYSPELAAKPRWLVFNKTDLLLEEELQERVDAIVAELGWEGDVYTMSAATREGTKELAEKLFDFIKSLPDEAAAADPDKEVEFKWDNYHKAQLDDLNPDFDDSDDDDDFDDDDYDVEVIYQR

Annotated regions:
phrase: DVGLLGMPNAGKSTFIRAVSRATPKVADYPFTTLVPNLGVVNPRPGQSFVIADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHILDIEPIDGSSPAESARAIVAELEKYSPELAAKPRWLVFN
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: MKFVDEAVIKVQAGDGGSGCVSFRREKYIPDGGPDGGDGGDGGSVYLVADASLNTLIDYRFERFYLAERGENGRGRDCTGKGGSDLTLRVPVGTRAVDIDTDEVLGDLTEVGQKLLVAKGGFHGLGNTRFKSSVNRAPRQKTLGTKGEVRELRLELLL
type: DOMAIN
name: GTP1_OBG_dom
description: GTP1/OBG domain

phrase: VGLLGMPNAGKSTFIRAVSR
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: TPKVADYPFTTLVPNLGV
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: IADIPGLIEGAAEGA
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: GIRFLKHLERCRVLLHIL
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: GMPNAGKSTFIRAVSRATPKVADYPFTTLVPNLGVVNPRPGQSFVIADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHILDIEPIDGSSPAESARAIVAELEKYSPELAAKPRWLVFNKTDLLLEEELQERVDAIVAELGWEGDVYTMSAATREGTKELAEKLFDF
type: DOMAIN
name: G_OBG
description: OBG-type guanine nucleotide-binding (G) domain

phrase: ADVGLLGMPNAGKSTFIRAVSRATPKVADYPFTTLVPNLGVVNPRPGQSFVIADIPGLIEGAAEGAGLGIRFLKHLERCRVLLHILDIEPIDGSSPAESARAIVAELEKYSPELAAKPRWLVFNKTDLLLEEELQERVDAIVAELGWEGDVYTMSAATREGTKELAEKLFDFI
type: DOMAIN
name: G_OBG
description: OBG-type guanine nucleotide-binding (G) domain

phrase: DIPGLIEGAAEGA
type: CONSERVED_SITE
name: GTP1-OBG_CS
description: GTP1/OBG, conserved site

phrase: VDEAVIKVQAGDGGSGCVSFRREKYIPDGGPDGGDGGDGGSVYLVADASLNTLIDYRFERFYLAERGENGRGRDCTGKGGSDLTLRVPVGTRAVDIDTDEVLGDLTEVGQKLLVAKGGFHGLGNTRFKSSVNRAPRQKTLGTKGEVRELRLE
type: DOMAIN
name: GTP1_OBG_dom
description: GTP1/OBG domain
Protein sequence:
MTVIDEMGKASAKAQNLPAPITSASRMQTNRHVLYILMDHDVKGSGKGAVIGFLKVGYKKLFVLDRHGAHNEVEPLCVLDFYIHESLQRHGYGKELFQHMLQSERVEPHQLAVDRPSEKLLCFLRKHYNLKETISQVNNFVIFEGFFANQHVLKEEVEPPWPFNQSHALTRSSSLGNSPVRGCLKPFLNEQELLRNLRLCPPHAGAHHLLNGEPGGPAAQRRRTSGGCRGQAGLIAQRSSYSRYGNPKGAANIPERRAMGQEPSKRLQDVETCLGSATIPSQDPSDLPSLSKSGVHPPNGALCSSEEPPVATQPEPTDRTEDPGIRAVAESKPSRQGAHTDRLPPWLGSRCHDAPWAPWGKQQSWTVAGVFHDAQWIRYKQEYRNTRPW

Annotated regions:
phrase: TVIDEMGKASAKAQNLPAPITSASRMQTNRHVLYILMDHDVKGSGKGAVIGFLKVGYKKLFVLDRHGAHNEVEPLCVLDFYIHESLQRHGYGKELFQHMLQSERVEPHQLAVDRPSEKLLCFLRKHYNLKETISQVNNFVIFEGF
type: DOMAIN
name: GNAT_ATAT
description: Gcn5-related N-acetyltransferase (GNAT) domain, ATAT-type

phrase: MTVIDEMGKASAKAQNLPAPITSASRMQTNRHVLYILMDHDVKGSGKGAVIGFLKVGYKKLFVLDRHGAHNEVEPLCVLDFYIHESLQRHGYGKELFQHMLQSERVEPHQLAVDRPSEKLLCFLRKHYNLKETISQVNNFVIFEGFFANQHVLKEE
type: DOMAIN
name: GNAT_ATAT
description: Gcn5-related N-acetyltransferase (GNAT) domain, ATAT-type

phrase: MTVIDEMGKASAKAQNLPAPITSASRMQTNRHVLYILMDHDVKGSGKGAVIGFLKVGYKKLFVLDRHGAHNEVEPLCVLDFYIHESLQRHGYGKELFQHMLQSERVEPHQLAVDRPSEKLLCFLRKHYNLKETISQVNNFVIFEGF
type: DOMAIN
name: GNAT_ATAT
description: Gcn5-related N-acetyltransferase (GNAT) domain, ATAT-type
Protein sequence:
MGGKWSKRSRDRWPAVRERMRQAEPAAEGVGAVSRDLARHGAVTSSNTPANNADXAWLEAQEEEEEVGFPVRPQVPLRPMTFKGAVDLSHFLKEKGGLEGLIXSQKRQDILDLWVYNTQGYFPDWQNYTPGPGPRYPLTFGWCFKLVPVEPEKVEEANEGENNXLLXPMSLHGMDDXEKEVLQWKFDSRLAFHHVARELHPXYYKNC

Annotated regions:
Protein sequence:
MELKNKVSNLPSKPGCYLYLNKDKHVIYVGKAKNLKKRVSSYFDRAQNLKTTRLVREIADLEYFVVSNEKESLLLEENLIKKYRPKYNVLLNDDKAYPYIIITNEKDPTYKYVRKLDKKAFRSFGPLPIGSNARETLITLQRLFPLRRCKGNLGKPCLHYFIGQCSGACFKEVNKEYYQEQIKRVDNFFKGNINEVKTLLTNQMHKAAENLQFEEAQRIKEQIISLDFTTTKQNVEFKSQTDVDVISYFIEDEKIAIVTLFYRSGKLLFKDEHIQLYFEQDITDLIDSFMSQIYDKNILPDKIIVDNEVELFDLNEKYKSISTHPIKEDEKIIYKLATENAQEAIRKSKISTTINIGNENELLLELQEKANLQKEPYRLEMFDISNIGNEFIVGSCVVYINGKPARNEFRKYNIESKFTSDYDRLKEMLYRRFQKALIEKRMLPDLIIMDGGIIQIHAAKEIINALGLSEIQVIGLVKDEHHNTSFLIDTNEEQVIIKDKPKLFNWLSSIQVRVDEYAKSGFRKKQNNSFLKSDLEQIEGLGKKRIQDLFKKFNTINEIESADQEELFKILKNKKALDNLNIYLKNRK

Annotated regions:
phrase: PGCYLYLNKDKHVIYVGKAKNLKKRVSSYFDRAQNLKTTRLVREIADLEYFVVSNEKESLLLEENLIKKYRPKY
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: KPGCYLYLNKDKHVIYVGKAKNLKKRVSSYFDRAQNLKTTRLVREIADLEYFVVSNEKESLLLEENLIKKYRPKYNVLLN
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: NEVKTLLTNQMHKAAENLQFEEAQRIKEQIISLDF
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: SKPGCYLYLNKDKHVIYVGKAKNLKKRVSSYFDRAQNLKTTRLVREIADLEYFVVSNEKESLLLEENLIKKYRPKYN
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: QEKANLQKEPYRLEMFDISNIGNEFIVGSCVVYINGKPARNEFRKYNIESKFTSDYDRLKEMLYRRFQKALIEKRMLPDLIIMDGGIIQIHAAKEIINALGLSEIQVIGLVKDEHHNTSFLIDTNEEQVIIKDKPKLFNWLSSIQVRVDEY
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: KTLLTNQMHKAAENLQFEEAQRIKEQIIS
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: VISYFIEDEKIAIVTLFYRSGKLLFKDEHIQLYFEQDITDLIDSFMSQIYDKNILPDKIIVDNEVELFDLNEKYKSISTHPIKEDEKIIYKLATENAQEAIRKSKISTTINIGNENELLLELQEKANLQKEPYRLEMFDISNIGNEFIVGSCVVYINGKPARNEFRKYNIESKFTSDYDRLKEMLYRRFQKALIEKRMLPDLIIMDGGIIQIHAAKEI
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: LPSKPGCYLYLNKDKHVIYVGKAKNLKKRVSSYFDRAQNLKTTRLVREIADLEYFVVSNEKESLLLEENLIKKYRPKYN
type: DOMAIN
name: GIY-YIG_UvrC_Cho
description: UvrC/Cho-like, GIY-YIG domain
Protein sequence:
MKVKIKQIYQFEGTSSLPAYSTNGSAGMDLYAAIASPMIIKPHETALVPAGIAISLPYGYEAQIRSRSGLASKFGVIVLNSPGTIDSDYRGELKIIMINLGQKDFQLTPAMRIAQMVIAKYEVISWEIVDDLDETERGEKGFGSSGLK

Annotated regions:
phrase: AGMDLYAAIASPMIIKPHETALVPAGIAISLPYGYEAQIRSRSGLASKFGVIVLNSPGTIDSDYRGELKIIMINLGQKDFQLTPAMRIAQMV
type: DOMAIN
name: dUTPase_trimeric
description: dUTPase, trimeric

phrase: SLPAYSTNGSAGMDLYAAIASPMIIKPHETALVPAGIAISLPYGYEAQIRSRSGLASKFGVIVLNSPGTIDSDYRGELKIIMINLGQKDFQLTPAMRIAQMVIAKYEVISWEIVDDLDETERGEKGFGSS
type: DOMAIN
name: dUTPase-like
description: dUTPase-like
Protein sequence:
MAIISSNIDDNDFSLRKKELRLVDSKVIPEEKKNNNLNLARPLNFKEFIGQEQLKSSLRIAIDASIFRKEPLEHTLLYGQPGLGKTTLAFLIAHELKTKCRIATAPAIERPRDIVGLLLGLKEGEVLFIDEIHRLNRLTEELLYSAMEDFRLDLTMGANRGARCRTINLPRFTLIGATTKLASISAPLRDRFGISQKIEFYTYDELKQIIVNFSRLINLNLDDEASYDLAKISRGTPRIALRLLRRVRDYAQVVMKTNNISVNLIKKALNSYQIDEKGLDSLDRNYLFFLNQNKNIPIGLDSIAAGLGDDSSMLEFVVEPYLIKIGFLTRTPRGRLLTALGKKYIDSKNENF

Annotated regions:
phrase: EKGLDSLDRNYLFFLNQNKNIPIGLDSIAAGLGDDSSMLEFVVEPYLIKIGFLTRTPRGRLLTALGKKY
type: DOMAIN
name: RuvB_C
description: RuvB C-terminal winged helix domain

phrase: PLEHTLLYGQPGLGKTTLAFLIAHELKTKCRIATAPAIERPRDIVGLLLGLKEGEVLFIDEIHRLNRLTEELLYSAMEDFRLDLTMGANRGARCRTINLPRFTLIGATTKLASISAPLRDRFGISQKIEFYTY
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: YTYDELKQIIVNFSRLINLNLDDEASYDLAKISRGTPRIALRLLRRVRDYAQVVMKTNNISVNLIKKALNSYQI
type: DOMAIN
name: AAA_lid_4
description: RuvB, AAA lid domain

phrase: RPLNFKEFIGQEQLKSSLRIAIDASIFRKEPLEHTLLYGQPGLGKTTLAFLIAHELKTKCRIATAPAIERPRDIVGLLLGLKEGEVLFIDEIHRLNRLTEELLYSAMEDFRLDLTMGANRGARCRTINLPRFTLIGATTKLASISAPLRDRFGISQ
type: DOMAIN
name: RuvB-like_N
description: RuvB-like P-loop domain
Protein sequence:
MKDNERRILLGRVVGGFGLRGEIKIESWTEPRDAIFRYQPWLLRSPTGTESMLNGARGYETGKRLIATFPGINDRNGVEAICGTEIYVPRSALPPPHPDEYYWVDLEGLQVHTLEGVVLGSVSHLFSNGANDVIVIHGERERLIPFVQPDYVKSVDFEAERIVVDWDPEF

Annotated regions:
phrase: WVDLEGLQVHTLEGVVLGSVSHLFSNGANDVIVIHGERERLIPFVQPDYVKSVDFEAERIVVDW
type: DOMAIN
name: PRC_RimM
description: Ribosome maturation factor RimM, PRC barrel domain

phrase: LGRVVGGFGLRGEIKIESWTEPRDAIFRYQPWLLRSPTGTESMLNGARGYETGKRLIATFPGINDRNGVEAICGTEIYVPR
type: DOMAIN
name: RimM_N
description: RimM, N-terminal
Protein sequence:
MRVKETQMSWPNLWKWGTLILGLVIICSASNNLWVTVYYGVPVWRDADTTLFCASDAKAQEAEVHNVWATHACVPTDPNPQEIHLENVTENFNMWKNSMAEQMQEDVISLWDQSLKPCVKLTPLCVTLNCSSATFTHTKNITDEVKIGNISDEVRNCSFNMTTELRDKKQKVYALFYKLDIVQIDKNEKEYRLINCNTSVIKQACPKISFDPIPIHYCTPAGYAILKCNDKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEDEIVIRSENITDNAKTIIVHLNQSVEINCTRPSNNTITSITMGPGQVFYRTGEIIGDIRKAYCEINGTKWNEVLEQVAGKLKEHFNNKPISFQPHSGGDLEITMHHFNCRGEFFYCNTSKLFNKTYTENKTNETKNDTDTITLPCKIKQIINMWQGIGQAMYAPPISGTINCISNITGILLTRDGGNNITNETFRPGGGDIKDNWRSELYKYKVVQIEPLGIAPTRAKRRVVEREKRAVGIGAMIFGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQKFLGLWGCSGKIICTTAVPWNSTWSNKSYEEIWGNMTWIEWEREISNYTNQIYELLTKSQDQQDKNEKDLLALDNWASLWNWFDITNWLWYIKIFIMIVGGLIGLRIIVALLSIVNRVRKGYSPLSFQIPFHHQREPDRPERIEEEGGEQDRARSVRLVSGFLALAWDDLRSLCLFSYHRLRDFS

Annotated regions:
phrase: NITDEVKIGNISDEVRNCSFNMTTELRDKKQKVYALFYKLDIVQIDKNEKEYRLINCNTSVIKQACPKISFDPIPIHYCTPAGYAILKCNDKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEDEIVIRSENITDNAKTIIVHLNQSVEINCTRPSNNTITSITMGPGQVFYRTGEIIGDIRKAYCEINGTKWNEVLEQVAGKLKEHFNNKPISFQPHSGGDLEITMHHFNCRGEFFYCNTSKLFNKTYTENKTNETKNDTDTITLPCKIKQIINMWQGIGQAMYAPPISGTINCISNITGILLTRDGGNNITNETFRPGGGDIKDNWRSELYKYKVVQIEPLGIAPTRAKRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: LWVTVYYGVPVWRDADTTLFCASDAKAQEAEVHNVWATHACVPTDPNPQEIHLENVTENFNMWKNSMAEQMQEDVISLWDQSLKPCVKLTPLCVTLNCSSA
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: VQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQKFLGLWGCSGKIICTTAVPWNSTWSNKSYEEIWGNMTWIEWEREISNYTNQIYELLTKSQDQQDKNEKDLLAL
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: MGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLKDQKFLGLWGCSGKIICTTAVPWNSTWSNKSYEEIWGNMTWIEWEREISNYTNQIYELLTKSQDQQDKNEKDLLALDNWASLWNWFDITNWLWYIKIFIMIVGGLIGLRIIVALLSIVNRVRKGYSPLSFQI
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MGNRVEFAKMNGLGNKILVVDMRGRADRVMPQAAIALAGNAETHFDQIMAIHDPKLAGTFAYIDIINCDGTLAQACGNGTRCVVQALSAETGLKAFTFQTLAGILNAVEHDDRTVSVDMGSPVFDWNRIPLSEEFHDTSRIELQIGPIDAPVLHSPAVMSMGNPHAVFWVDRDPMSYDLERFGPLLENHPLFPEKANITLAQVTSRTTMTTRTWERGAGLTLACGSAACAAGVSAARTGRAERKVTITVASSPNRQALDIEWRERDGHVIMTGAAEWEWAGQLDPQTGDWQREQQAGHEASVS

Annotated regions:
phrase: NCDGTLAQACGNGT
type: ACTIVE_SITE
name: DAP_epimerase_AS
description: Diaminopimelate epimerase, active site
Protein sequence:
MFGKLSLEAIPYHEPIVMVTLAMIALGGIAVVGAITYFRKWTYLWSEWLTTVDHKKIGVMYIIVAMVMLLRGFADAIMMRTQLAAATGGSEGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQYSPGVGVDYYIWALQLSGLGTTLTGVNFLVTVMKMRAPGMKLMDMPIFTWTCTWANVLIVASFPILTAALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFAGKRLFGHHSMIYASGAIAVLGFAVWLHHFFTMGAGASVNTFFGLATMLISIPTGVKLFNWLFTIYQGRLRFTAPIMWTLGFMITFSIGGMTGVLLAVPGADFVLHNSLFVIAHFHNVIIGGAVFGYIAGFAYWFPKAFGFTLNEKWGKAAFWFWISGFYVAFMPLYALGFMGMTRRLNHSDNPLWEPYLYVAVVGAVLILFGIACQLIQLYVSVRDRNQNLDVTGDPWGGRTLEWSTSSPPPFYNFAHMPEKVGLDAWHEAKEAGVAYKPAAKYEAIHMPSNTSTGLFMGLFLTVFGFAFIWHIWWLVGASLVATIAVFVRHAARDDQGYMVPAEEVARIEGERMKALAKAGALPAGARVESFERV

Annotated regions:
phrase: RKWTYLWSEWLTTVDHKKIGVMYIIVAMVMLLRGFADAIMMRTQLAAATGGSEGYLPPEHYDQIFTAHGVIMIIFMAMPFFTGLMNLAVPLQIGARDVAFPFLNSLSFYLLLAGVLLVNISLGVGEFAKTGWVAYPPLAGIQYSPGVGVDYYIWALQLSGLGTTLTGVNFLVTVMKMRAPGMKLMDMPIFTWTCTWANVLIVASFPILTAALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHPEVYILILPAFGVFSEVTSTFAGKRLFGHHSMIYASGAIAVLGFAVWLHHFFTMGAGASVNTFFGLATMLISIPTGVKLFNWLFTIYQGRLRFTAPIMWTLGFMITFSIGGMTGVLLAVPGADFVLHNSLFVIAHFHNVIIGGAVFGYIAGFAYWFPKAFGFTLNEKWGKAAFWFWISGFYVAFMPLYALGFMGMTRRLNHSDNPLWEPYLYVAVVGAVLILFGIACQLIQLYVSVRDRNQNLDVTGDPWGGRTLEWSTSSPPPFYNFAHMPEK
type: DOMAIN
name: Cyt_c_oxase-like_su1_dom
description: Cytochrome c oxidase-like, subunit I domain

phrase: WAWGHPEVYILILPAFGVFSEVTSTFAGKRLFGHHSMIYASGAIAVLGFAVWLH
type: BINDING_SITE
name: Cyt_c_Oxase_su1_BS
description: Cytochrome c oxidase, subunit I, copper-binding site
Protein sequence:
MLSTNKNRLIEMLSAALTGLAQERGLEAPPTPRLERPKAVDHGDVACNIALQLSKAWKLNPRELAQALVERLQQQTGFNELIASCEIAGPGFSNFRLSNAAKTAVVQEILSGGTSFGESAPADGSATSAMIEFVSANPTGPLHVGHGRQAALGDALANLLATQGIKVHREFYYNDAGVQIANLALSVQARLQGLKPGDAKWPEQAYNGEYIAEIATTFKASPEFKDDIEAIRQFAVAYLRNEQDIDLKTFGVKFDCYYLESSLYTDGSVAQIVGDLQSIGKTYESEGVLWLKTIDDGDDKDRVMRKSDGSFTYFVPDVAYHTSKWNRGFQKVINVQGSDHHGTIARVRSGLQGVAQKRGWDIPKTYPDYVLHKMVTVMRHGEEVKISKRAGSYVTVRDLVEWSGGVTPEMTSEERELALQRGRDAVRFFLISRKADTEFVFDIDLALQQNDENPVFYVQYAHARISSILQQWGGQTSDLASADLSLLQSKASDHLLRCLAEYPEMLTTAAEELAPHALAFYLRNLAGDFHTFYNADRVLVDDQNLKLARLALLSATRQVLQNGLKVLGVSAPAKM

Annotated regions:
phrase: NRLIEMLSAALTGLAQERGLEAPPTPRLERPKAVDHGDVACNIALQLSKAWKLNPRELAQALVERLQQQTGFNELIASCEIAGPGFSNFR
type: DOMAIN
name: Arg-tRNA-synth_N
description: Arginyl tRNA synthetase N-terminal domain

phrase: VQYAHARISSILQQWGGQTSDLASADLSLLQSKASDHLLRCLAEYPEMLTTAAEELAPHALAFYLRNLAGDFHTFYNADRVLVDDQNLKLARLALLSATRQVLQNGLKVLGVSAPAK
type: DOMAIN
name: DALR_anticod-bd
description: DALR anticodon binding

phrase: PTGPLHVGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: RLIEMLSAALTGLAQERGLEAPPTPRLERPKAVDHGDVACNIALQLSKAWKLNPRELAQALVERLQQQTGFNELIASCEIAGPGFSNFR
type: DOMAIN
name: Arg-tRNA-synth_N
description: Arginyl tRNA synthetase N-terminal domain

phrase: MIEFVSANPTGPLHVGHGRQAALGDALANLLATQGIKVHREFYYNDAGVQIANLALSVQARLQGLKPGDAKWPEQAYNGEYIAEIATTFKASPEFKDDIEAIRQFAVAYLRNEQDIDLKTFGVKFDCYYLESSLYTDGSVAQIVGDLQSIGKTYESEGVLWLKTIDDGDDKDRVMRKSDGSFTYFVPDVAYHTSKWNRGFQKVINVQGSDHHGTIARVRSGLQGVAQKRGWDIPKTYPDYVLHKMVTVMRHGEEVKISKRA
type: DOMAIN
name: ArgRS_core
description: Arginyl-tRNA synthetase, catalytic core domain

phrase: GSATSAMIEFVSANPTGPLHVGHGRQAALGDALANLLATQGIKVHREFYYNDAGVQIANLALSVQARLQGLKPGDAKWPEQAYNGEYIAEIATTFKASPEFKDDIEAIRQFAVAYLRNEQDIDLKTFGVKFDCYYLESSLYTDGSVAQIVGDLQSIGKTYESEGVLWLKTIDDGDDKDRVMRKSDGSFTYFVPDVAYHTSKWNRGFQKVINVQGSDHHGTIARVRSGLQGVAQKRGWDIPKTYPDYVLHKMVTVMRHGEEVKISKRAGSYVTVRDLV
type: DOMAIN
name: ArgRS_core
description: Arginyl-tRNA synthetase, catalytic core domain

phrase: VQYAHARISSILQQWGGQTSDLASADLSLLQSKASDHLLRCLAEYPEMLTTAAEELAPHALAFYLRNLAGDFHTFYNADRVLVDDQNLKLARLALLSATRQVLQNGLKVLGVSAPAK
type: DOMAIN
name: DALR_anticod-bd
description: DALR anticodon binding
Protein sequence:
MTVSELNEQAKALLETHFSFVEVTGEISRLIRHSSGHWYFSLKDEKSVISSAMYKFSNQQVKFEVKDGMQVTIYGKLTIYPPSGSYQLLANKMLPVGIGELELAFNQLKSKLENEGLFDIKFKKPLPKFPKKIAIVTSLTSAAYQDMLKVINSRYKLCEFIAFNTLVQGEMAAANIIQMLQKADKMGFDAIVLARGGGSKEDLWCFNDENLARVIFTLKTPIVSAVGHEIDYCISDFVSDHRSLTPTAAMVDLLPDANTILQSLDIAFDKFESFIDGKFQNSFNILNLINQSLKNQAISQKIEKANLTLENKKANLENLITSKINNLAHKIKEFELVFDRQEQFFKATKNMVQIEKNGKIMPLHELQIGDEISIYSQITKKNAIIKS

Annotated regions:
phrase: LFDIKFKKPLPKFPKKIAIVTSLTSAAYQDMLKVINSRYKLCEFIAFNTLVQGEMAAANIIQMLQKADKMGFDAIVLARGGGSKEDLWCFNDENLARVIFTLKTPIVSAVGHEIDYCISDFVSDHRSLTPTAAMVDLLPDANTILQSLDIAFDKFESFIDGKFQNSFNILNLINQSLKNQAISQKIEKANLTLENKKANLENLITSKINNLAHKIKEFELVFDRQEQFFKATK
type: DOMAIN
name: Exonuc_VII_lsu_C
description: Exonuclease VII, large subunit, C-terminal

phrase: FVEVTGEISRLIRHSSGHWYFSLKDEKSVISSAMYKFSNQQVKFEVKDGMQVTIYGKLTIYPPSGSYQLLANKMLPV
type: DOMAIN
name: OB-fold_nuc-bd_dom
description: OB-fold nucleic acid binding domain

phrase: MTVSELNEQAKALLETHFSFVEVTGEISRLIRHSSGHWYFSLKDEKSVISSAMYKFSNQQVKFEVKDGMQVTIYGKLTIYPPSGSYQLLANK
type: DOMAIN
name: OB-fold_nuc-bd_dom
description: OB-fold nucleic acid binding domain
Protein sequence:
MEDSGFSGVVRLSNVSDFIAPNLDCIIPLETRTVEKKNEEPQVNIRAKKTKNEENKPKEDKKSVKISLADCLACNGCITSAETVLVEEQSFGRLLEGIRNSKMAVITISPQTITSLAVKLEKTPEDLAKLIASFFRRHGVKYVLDSSFARQFAHSLAYEELLLTPSTSRPLLSSACPGFVCYAEKSHGELLIPKISKIRSPQAISGAIVKGYLAKKEGLSPCDVFHAAVMPCFDKKLEHRGNSLGTAELLEELVKEEGVAEDVEEEEENNWTTSLSRGIIIGEDGGASGGYADRIVRDFVAQNGGIVKTSKLNKNMFSTTVESTTTGEIVLRVAKVYGFRNVQNLVRKMKTKKEKTDYVEVMACPGGCANGGGQVRYETMDEREKRLAQVEELYEALPRGNSWEESVREEWKRLDTNYKNLLFTDYKPVETNVAQTLKW

Annotated regions:
phrase: MAVITISPQTITSLAVKLEKTPEDLAKLIASFFRRHGVKYVLDSSFARQFAHSLAYEELLLTPSTSRPLLSSACPGFVCYAEKSHGELLIPKISKIRSPQAISGAIVKGYLAKKEGLSPCDVFHAAVMPCFDKKLEHRGNSLGTAELLEELVKEEGVAEDVEEEEENNWTTSLSRGIIIGEDGGASGGYADRIVRDFVAQNGGIVKTSKLNKNMFSTTVESTTTGEIVLRVAKVYGFRNVQNLVRKMKTKKEKTDYVEVMACPGGCANG
type: DOMAIN
name: Fe_hydrogenase_lsu_C
description: Iron hydrogenase, large subunit, C-terminal
Protein sequence:
MSVAFAAPRQRGKGEITPAAIQKMLDENNHLIQCIMDYQNKGKASECSQYQQILHTNLVYLATIADSNQNMQSLLPAPPTQTMPMGPGGMSQSGPPPPPRSHNMPSDGMVGGGPPAPHMQNQMNGQMPGPNHMPMQGPGPSQLSMTNSSMNMPSSSHGSMGGYNHSVPSSQSMPVQNQMTMSQGQPMGNYGPRPNMNMQPNQGPMMHQQPPSQQYNMPPGGAQHYQGQQAPMGLMGQVNQGSHMMGQRQMPPYRPPQQGPPQQYSGQEDYYGDQYSHGGQGPPEGMNQQYYPDGHNDYGYQQPSYPEQGYDRPYEDSSQHYYEGGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPGQQQSYGPSQGGPGPQYPNYPQGQGQQYGGYRPTQPGPPQPPQQRPYGYDQGQYGNYQQ

Annotated regions:
phrase: GEITPAAIQKMLDENNHLIQCIMDYQNKGKASECSQYQQILHTNLVYLATIADSNQNMQ
type: DOMAIN
name: SS18_N
description: SS18, N-terminal
Protein sequence:
MKLTMPRFDQAPVLVVGDVMLDRYWHGATSRISPEAPVPVVRVDQNEDRPGGAANVALNIAALGAPAYLVGVTGQDEAADALADSLKAAKVEARFQRIAGQPTIVKLRIMSRHQQLLRVDFEESFKTDTQALAADTRSMLAGVKVLVLSDYGKGALRNHQDLIQLARARNIPVLADPKGKDFSIYRGASLITPNLSEFEAIVGPCTDEADLVAKGCKLIADLELGALLVTRGENGMTLLRPDQQPFHLPARAREVFDVTGAGDTVISTLAAALAAGEELHNAVALANLAAGIVVGKLGTAAISAPELRRAVQREEGSERGVLALEQLQVAIEDARAHGEKIVFTNGCFDILHAGHVAYLEQARALGDRLIVAVNDDASVTRLKGPGRPINTVDRRMAVLAGLGAVDWVIPFSESTPEELLKQVKPDVLVKGGDYKSVDEVVGAPLVQAYGGEVKVLGVVENSSTTAIVERIRGNP

Annotated regions:
phrase: VLVVGDVMLDRYWHGATSRISPEAPVPVVRVDQNEDRPGGAANVALNIAALGAPAYLVGVTGQDEAADALADSLKAAKVEARFQRIAGQPTIVKLRIMSRHQQLLRVDFEESFKTDTQALAADTRSMLAGVKVLVLSDYGKGALRNHQDLIQLARARNIPVLADPKGKDFSIYRGASLITPNLSEFEAIVGPCTDEADLVAKGCKLIADLELGALLVTRGENGMTLLRPDQQPFHLPARAREVFDVTGAGDTVISTLAAALAAGEELHNAVALANLAAGIVVGKLGTAAISAPELR
type: DOMAIN
name: RfaE_dom_I
description: RfaE bifunctional protein, domain I

phrase: MPRFDQAPVLVVGDVMLDRYWHGATSRISPEAPVPVVRVDQNEDRPGGAANVALNIAALGAPAYLVGVTGQDEAADALADSLKAAKVEARFQRIAGQPTIVKLRIMSRHQQLLRVDFEESFKTDTQALAADTRSMLAGVKVLVLSDYGKGALRNHQDLIQLARARNIPVLADPKGKDFSIYRGASLITPNLSEFEAIVGPCTDEADLVAKGCKLIADLELGALLVTRGENGMTLLRPDQQPFHLPARAREVFDVTGAGDTVISTLAAALAAGEELHNAVALANLAAGIVVGKLGTAAISAPELRRA
type: DOMAIN
name: RfaE_dom_I
description: RfaE bifunctional protein, domain I

phrase: IVFTNGCFDILHAGHVAYLEQARALGDRLIVAVNDDASVTRLKGPGRPINTVDRRMAVLAGLGAVD
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: VLVVGDVMLDRYWHGATSRISPEAPVPVVRVDQNEDRPGGAANVALNIAALGAPAYLVGVTGQDEAADALADSLKAAKVEARFQRIAGQPTIVKLRIMSRHQQLLRVDFEESFKTDTQALAADTRSMLAGVKVLVLSDYGKGALRNHQDLIQLARARNIPVLADPKGKDFSIYRGASLITPNLSEFEAIVGPCTDEADLVAKGCKLIADLELGALLVTRGENGMTLLRPDQQPFHLPARAREVFDVTGAGDTVISTLAAALAAGEELHNAVALANLAAGIVVGKLGTAAI
type: DOMAIN
name: PfkB_dom
description: Carbohydrate kinase PfkB

phrase: FTNGCFDILHAGHVAYLEQARALGDRLIVAVNDDASVTRLKGPGRPINTVDRRMAVLAGLGAVDWVIPFSESTPEELLKQVKPDVLVKGGDYKSVDEVVGAPLVQAYGGEVKVLGVVENSSTTAI
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: GGAANVALNIAALGAPAYLVGVT
type: CONSERVED_SITE
name: Carboh/pur_kinase_PfkB_CS
description: Carbohydrate/purine kinase, PfkB, conserved site

phrase: IEDARAHGEKIVFTNGCFDILHAGHVAYLEQARALGDRLIVAVNDDASVTRLKGPGRPINTVDRRMAVLAGLGAVDWVIPFSESTPEELLKQVKPDVLVKGGDYKSVDEVVGAPLVQAYGGEVKVLGVVENSSTTAIVERI
type: DOMAIN
name: RfaE_dom_II
description: RfaE bifunctional protein, domain II
Protein sequence:
MQLKRVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGHTPVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKIRAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTEAGINIVERVPLIVGRNPNNEHYLDTKAEKMGHLLNK

Annotated regions:
phrase: RVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGHTPVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKIRAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTEAGINIVERV
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MTQNTDSALAVIILAAGQGTRMKSSLPKVLHHIGGRPLVGHVLATARALGPERMAVVVRHERDLVAAAVVDAVPEAVVVDQDEIPGTGRAVEVALEALDGFAGDVLVLSGDVPLLEAETLAGLVGAHRDSGAAATVLSATLDDATGYGRVIRDAAGGVVRIVEQKDATAEEAAVTEINAGVYVFRAGELRTQLAQVGTANAQGEKYLTDVIGLLREAALPVAAAGAPDADAALGVNDRVQLSEAARLLNARTVRRWQLAGASILDPATTWIDVTATLAPDVTVLPGTHILRATVIDEGAVVGPDTSLVDCEVGAGATVTRTDATLAVIGAGATVGPFAYLRPGTVLGAKGKIGTFVETKNSTIGDRSKVPHLSYIGDTTIGTGVNLGAGAITANYDDIAKHRTEIGDEVHTGSHNVFVAPVRIGDGAKTGAGAVIRKDVPAGALALSVAPQRNVEGWVEKNRPGTGAADVAAKARSAQKADDGAQEED

Annotated regions:
phrase: VIILAAGQGTRMKSSLPKVLHHIGGRPLVGHVLATARALGPERMAVVVRHERDLVAAAVVDAVPEAVVVDQDEIPGTGRAVEVALEALDGFAGDVLVLSGDVPLLEAETLAGLVGAHRDSGAAATVL
type: DOMAIN
name: MobA-like_NTP_Trfase
description: MobA-like NTP transferase

phrase: GASILDPATTWIDVTATLAPDVTVLPGTHILRATVIDEGAVVGPDTSLVDCEVGAGATVTRTDATLAVIGAGATVGPFAYLRPGTVLGAKGKIGTFVETKNSTIGDRSKVPHLSYIGDTTIGTGVNLGAGAITANYDDIAKHRTEIGDEVHTGSHNVFVAPVRIGDGAKTGAGAVIRKDVPAGALALSVAP
type: DOMAIN
name: GlmU_C_LbH
description: GlmU, C-terminal LbH domain

phrase: TEIGDEVHTGSHNVFVAPVRIGDGAKTGAGAVIR
type: REPEAT
name: Hexapep
description: Hexapeptide repeat