nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MPSYTVTVATGSQWFAGTDDYIYLSLIGSAGCSEKHLLDKAFYNDFERGAVDSYDVTVDEELGEIYLVKIEKRKYWLHDDWYLKYITLKTPHGDYIEFPCYRWITGEGEIVLRDGRAKLARDDQIHILKQHRRKELEARQKQYRWMEWNPGFPLSIDAKCHKDLPRDIQFDSEKGVDFVLNYSKAMENLFINRFMHMFQSSWHDFADFEKIFVKISNTISERVKNHWQEDLMFGYQFLNGCNPVLIKRCTALPPKLPVTTEMVECSLERQLSLEQEVQEGNIFIVDYELLDGIDANKTDPCTHQFLAAPICLLYKNLANKIVPIAIQLNQTPGESNPIFLPTDSKYDWLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQLPAVHPLFKLLVAHVRFTIAINTKAREQLICEYGLFDKANATGGGGHVQMVQRAVQDLTYSSLCFPEAIKARGMDSTEDIPFYFYRDDGLLVWEAIQSFTMEVVSIYYENDQVVEEDQELQDFVKDVYVYGMRGKKASGFPKSIKSREKLSEYLTVVIFTASAQHAAVNFGQYDWCSWIPNAPPTMRAPPPTAKGVVTIEQIVDTLPDRGRSCWHLGAVWALSQFQENELFLGMYPEEHFIEKPVKEAMIRFRKNLEAIVSVIAERNKNKKLPYYYLSPDRIPNSVAI

Annotated regions:
phrase: VHPLFKLLVA
type: CONSERVED_SITE
name: LipOase_CS
description: Lipoxygenase, conserved site

phrase: PSYTVTVATGSQWFAGTDDYIYLSLIGSAGCSEKHLLDKAFYNDFERGAVDSYDVTVDEELGEIYLVKIEKRKYWLHDDWYLKYITLKTPHGDYIEFPCYRWITGEGEIVLRD
type: DOMAIN
name: PLAT/LH2_dom
description: PLAT/LH2 domain

phrase: HQTITHLLRTHLVS
type: BINDING_SITE
name: LipOase_Fe_BS
description: Lipoxygenase, iron binding site

phrase: PSYTVTVATGSQWFAGTDDYIYLSLIGSAGCSEKHLLDKAFYNDFERGAVDSYDVTVDEELGEIYLVKIEKRKYWLHDDWYLKYITLKTPHGDYIEFPCYRWITGEGEIVLRDGRA
type: DOMAIN
name: PLAT/LH2_dom
description: PLAT/LH2 domain

phrase: PSYTVTVATGSQWFAGTDDYIYLSLIGSAGCSEKHLLDKAFYNDFERGAVDSYDVTVDEELGEIYLVKIEKRKYWLHDDWYLKYITLKTPHGDYIEFPCYRWITGEGEIVLRD
type: DOMAIN
name: PLAT_LOX_verte
description: Lipoxygenase, vertebrates, PLAT domain

phrase: KLARDDQIHILKQHRRKELEARQKQYRWMEWNPGFPLSIDAKCHKDLPRDIQFDSEKGVDFVLNYSKAMENLFINRFMHMFQSSWHDFADFEKIFVKISNTISERVKNHWQEDLMFGYQFLNGCNPVLIKRCTALPPKLPVTTEMVECSLERQLSLEQEVQEGNIFIVDYELLDGIDANKTDPCTHQFLAAPICLLYKNLANKIVPIAIQLNQTPGESNPIFLPTDSKYDWLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQLPAVHPLFKLLVAHVRFTIAINTKAREQLICEYGLFDKANATGGGGHVQMVQRAVQDLTYSSLCFPEAIKARGMDSTEDIPFYFYRDDGLLVWEAIQSFTMEVVSIYYENDQVVEEDQELQDFVKDVYVYGMRGKKASGFPKSIKSREKLSEYLTVVIFTASAQHAAVNFGQYDWCSWIPNAPPTMRAPPPTAKGVVTIEQIVDTLPDRGRSCWHLGAVWALSQFQENELFLGMYPEEHFIEKPVKEAMIRFRKNLEAIVSVIAERNKNKKLPYYYLSPDRIPNSVA
type: DOMAIN
name: LipOase_C
description: Lipoxygenase, C-terminal

phrase: YTVTVATGSQWFAGTDDYIYLSLIGSAGCSEKHLLDKAFYNDFERGAVDSYDVTVDEELGEIYLVKIEKRKYWLHDDWYLKYITLKTPHGDYIEFPCYRWITGEG
type: DOMAIN
name: PLAT/LH2_dom
description: PLAT/LH2 domain

phrase: KYDWLLAKIWVRSSDFH
type: DOMAIN
name: LipOase_C
description: Lipoxygenase, C-terminal

phrase: HQTITHLLRTHLVSEVF
type: DOMAIN
name: LipOase_C
description: Lipoxygenase, C-terminal

phrase: MYRQLPAVHPLFKLLVAHVR
type: DOMAIN
name: LipOase_C
description: Lipoxygenase, C-terminal

phrase: ISERVKNHWQEDLMFGYQFLNGCNPVLIKRCTALPPKLPVTTEMVECSLERQLSLEQEVQEGNIFIVDYELLDGIDANKTDPCTHQFLAAPICLLYKNLANKIVPIAIQLNQTPGESNPIFLPTDSKYDWLLAKIWVRSSDFHVHQTITHLLRTHLVSEVFGIAMYRQLPAVHPLFKLLVAHVRFTIAINTKAREQLICEYGLFDKANATGGGGHVQMVQRAVQDLTYSSLCFPEAIKARGMDSTEDIPFYFYRDDGLLVWEAIQSFTMEVVSIYYENDQVVEEDQELQDFVKDVYVYGMRGKKASGFPKSIKSREKLSEYLTVVIFTASAQHAAVNFGQYDWCSWIPNAPPTMRAPPPTAKGVVTIEQIVDTLPDRGRSCWHLGAVWALSQFQENELFLGMYPEEHFIEKPVKEAMIRFRKNLEAIVSVIAERNKNKK
type: DOMAIN
name: LipOase_C
description: Lipoxygenase, C-terminal
Protein sequence:
MQKKFEDCVKTMLEIIGENPNREGLIKTPNRVFKAYEFLTSGYTQNVKEILNDALFESSNNEMVLVRDIEFYSLCEHHLLPFFGRAHVAYIPNKKVVGLSKIPRLVEVFARRLQIQEQLTEQIAQALMENADAKGVGVIIEARHMCVEMRGVQKANSTTTTSALRGIFLKNEKIREEFFSLINSAKQVRF

Annotated regions:
phrase: EMVLVRDIEFYSLCEH
type: CONSERVED_SITE
name: GTP_CycHdrlase_I_CS
description: GTP cyclohydrolase I, conserved site

phrase: EDCVKTMLEIIGENPNREGLIKTPNRVFKAYEFLTSGYTQNVKEILNDALFESSNNEMVLVRDIEFYSLCEHHLLPFFGRAHVAYIPNKKVVGLSKIPRLVEVFARRLQIQEQLTEQIAQALMENADAKGVGVIIEARHMCVEMRGVQKANSTTTTSALRGIFLKNEKIREEFFSL
type: DOMAIN
name: GTP_CycHdrlase_I_dom
description: GTP cyclohydrolase I domain
Protein sequence:
MADRLIVRGAREHNLKNVSLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSSYARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLFARIGKPHCPECGRPISRQSPQAIVDKVLELPEGSRFQVLSPLVRERKGEFVDLFADLQTKGYSRARVDGETVQLSNPPTLKKQEKHTIEVVVDRLTVKDSAKRRLTDSVETALGLSGGMVVLDFVDLPEDDPERERMYSEHLYCPYDDLSFEELEPRSFSFNSPFGACPDCSGIGTRMEVDAELIVPDEDKSLDEGAIHPWSHGHTKDYFGRLIGALADALGFRTDIPFAGLPLRARKALLYGHKTQVEVRYRNRYGRERRYTTAFEGAIPFVKRRHSEAESDASRERFEGYMREVPCPTCQGTRLKPLVLAVTVMGKSIAEVSAMSISDCADFLGELTLNARDKKIAERVLKEVNERLRFLVDVGLDYLSLNRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIETLVRLRDMGNTLIVVEHDEDTIKVADWIVDIGPGAGEHGGKVVHSGSVKELLDNAESQTGLYLSGRKAIPLPDIRRPQDPSRRLTVHGARENNLQDIDVSFPLGVFTAVTGVSGSGKSTLVNDILYTHLARELNGARNVPGRHTRVDGDDLVDKVVHVDQSPIGRTPRSNPATYTGVFDHIRKLFAETTEAKVRGYLPGRFSFNVKGGRCENCAGDGTIKIEMNFLPDVYVPCEVCHGARYNRETLEVHYKGKSIADVLNMPIEEATDFFEAVPAISRHMKTLKDVGLGYVRLGQSATTLSGGEAQRVKLASELQRRSTGRTVYVLDEPTTGLHFEDISKLLTVLGGLVDKGNTVIVIEHNLDVIKTADWVVDMGPEGGAGGGLVVAEGTPEQVAGVPASHTGKFLRDVLGADRVSDAAPVTRPRKAAKTVAAKAAAKKTATKTVTGTAAKKATATRTAKTAVKKAAKPAAKKTTRTSKA

Annotated regions:
phrase: LSGGEAQRIRLATQ
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: DAELIVPDEDKSLDEGAIHPWSHGHTKDYFGRLIGALADALGFRTDIPFAGLPLRARKALLYGHKTQVEVRYRNRYGRERRYTTAFEGAIPFVKRRHSEAESDASRERF
type: DOMAIN
name: UvrA_DNA-bd
description: UvrA DNA-binding domain

phrase: IPLPDIRRPQDPSRRLTVHGARENNLQDIDVSFPLGVFTAVTGVSGSGKSTLVNDILYTHLARELNGARNVPGRHTRVDGDDLVDKVVHVDQSPIGRTPRSNPATYTGVFDHIRKLFAETTEAKVRGYLPGRFSFNVKGGRCENCAGDGTIKIEMNFLPDVYVPCEVCHGARYNRETLEVHYKGKSIADVLNMPIEEATDFFEAVPAISRHMKTLKDVGLGYVRLGQSATTLSGGEAQRVKLASELQRRSTGRTVYVLDEPTTGLHFEDISKLLTVLGGLVDKGNTVIVIEHNLDVIKTADWVVDMGPEGGAGGGLVVAEGTPEQVAGVPASHTGKFL
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: QSPQAIVDKVLELPEGSRFQVLSPLVRERKGEFVDLFADLQTKGYSRARVDGETVQLSNPPTLKKQEKHTIEVVVDRLTVKDSAKRRLTDSVETALGLSGGMVVLD
type: DOMAIN
name: UvrA_inter
description: UvrA, interaction domain

phrase: LSGGEAQRVKLASE
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: LQDIDVSFPLGVFTAVTGVSGSGKSTLVNDILYTHLARELNGARNVPGRHTRVDGDDLVDKVVHVDQSPIGRTPRSNPATYTGVFDHIRKLFAETTEAKVRGYLPGRFSFNVKGGRCENCAGDGTIKIEMNFLPDVYVPCEVCHGARYNRETLEVHYKGKSIADVLNMPIEEATDFFEAVPAISRHMKTLKDVGLGYVRLGQSATTLSGGEAQRVKLASELQRRSTGRTVYVLDEPT
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain
Protein sequence:
MPPKRRLVDDADAMEDQDLYEPPASLPKLPGKFLQYTVGGSDPHPGIGHEKDIRQNAVALLDQSRRDMFHTVTPSLVFLCLLIPGLHAAFVHGGVPRESYLSTPVTRGEQTVVKTAKFYGEKTTQRDLTELEISSIFSHCCSLLIGVVIGSSSKIKAGAEQIKKRFKTMMAALNRPSHGETATLLQMFNPHEAIDWINGQPWVGSFVLSLLTTDFESPGKEFMDQIKLVASYAQMTTYTTIKEYLAECMDATLTIPVVAYEIRDFLEVSAKLKEDHADLFPFLGAIRHPDAIKLAPRSFPNLASAAFYWSKKENPTMAGYRASTIQPGASVKETQLARYRRREISRGEDGAELSGEISAIMKMIGVTGLN

Annotated regions:
Protein sequence:
MESRKDMVVFLDGGQLGTLVGKRVSNLSEAVGSPLPEPPEKMVPRGCLSPRAVPPATRERGGGGPEEEPVDGLAGSAAGPGAEPQVAGAAMLGPGPPAPSVDSLSGQGQPSSSDTESDFYEEIEVSCTPDCATGNAEYQHSKGSGSEALVGSPNGGSETPKSNGGSGGGGSQGTLACSASDQMRRYRTAFTREQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNRRMKDKRQRLAMTWPHPADPAFYTYMMSHAAAAGGLPYPFPSHLPLPYYSPVGLGAASAASAAASPFSGSLRPLDTFRVLSQPYPRPELLCAFRHPPLYPGPAHGLGASAGGPCSCLACHSGPANGLAPRAAAASDFTCASTSRSDSFLTFAPSVLSKASSVALDQREEVPLTR

Annotated regions:
phrase: MRRYRTAFTREQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNRRMKDKRQRLA
type: DOMAIN
name: HD
description: Homeodomain

phrase: RRYRTAFTREQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNRRMKDK
type: DOMAIN
name: HD
description: Homeodomain

phrase: DQMRRYRTAFTREQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNRRMKDKR
type: DOMAIN
name: HD
description: Homeodomain

phrase: ENYVSRPRRCE
type: DOMAIN
name: HD_metazoa
description: Homeodomain, metazoa

phrase: LNLPETTIKV
type: DOMAIN
name: HD_metazoa
description: Homeodomain, metazoa

phrase: WFQNRRMKD
type: DOMAIN
name: HD_metazoa
description: Homeodomain, metazoa

phrase: LAAALNLPETTIKVWFQNRRMKD
type: CONSERVED_SITE
name: Homeobox_CS
description: Homeobox, conserved site

phrase: RRYRTAFTREQIARLEKEFYRENYVSRPRRCELAAALNLPETTIKVWFQNRRMKDKRQ
type: DOMAIN
name: HD
description: Homeodomain
Protein sequence:
MPVVMARDLEETASSSEDEDLANQEDHPCIMWTGGCRRIPVLVFHAEAILTKDNNIRVIGERYHLSYKIVRTDSRLVRSILTAHGFHEVHPSSTDYNLMWTGSHLKPFLLRTLSEAQKVNHFPRSYELTRKDRLYKNIIRMQHTHGFKAFHILPQTFLLPAEYAEFCNSYSKDRGPWIVKPVASSRGRGVYLINNPNQISLEENILVSRYINNPLLIDDFKFDVRLYVLVTSYDPLVIYLYEEGLARFATVRYDQGSKNIRNQFMHLTNYSVNKKSGDYVSCDDPEVEDYGNKWSMSAMLRYLKQEGKDTTALMAHVEDLIIKTIISAELAIATACKTFVPHRSSCFELYGFDVLIDNTLKPWLLEVNLSPSLACDAPLDLKIKASMISDMFTVVGFVCQDPAQRTSNRSIYPSFESSRRNPFQKPQRTRPLSASDAEMKNLVASAREKVPGKLGGSVLGLSMEEIKVLRRVKEENDRRGGFIRIFPTSETWEIYGSYLEHKTSMNYMLATRLFQDRGNPRRSLLTGRARVSTEGAPELKVESMNSKAKLHAALYERKLLSLEVRKRRRRSGRLRAMRPKYPVIAQPAEMNIKTETESEEEEEVGLDNDDEEQEASQEESAGSLGENQAKYTPSLTVIVENSPRDNAMKVAEWTNKGEPCCKIEAQEPESKFNLMQILQDNGNLSKVQARLAFSAYLQHVQIRLTKDSGGQTLSPSWAAKEDEQMELVVRFLKRASSNLQHSLRMVLPSRRLALLERRRILAHQLGDFIGVYNKETEQMAEKKSKKKLEEEEEDGVNAESFQEFIRQASEAELEEVLTFYTQKNKSASVFLGTHSKSSKNSSSYSDSGAKGDHPETIQEVKIKQPKQQQATEIHADKLSRFTTSSGKEAKLVYTNCSSFCSPAAVLLQRLPSSHLSSVITTSALSAGPGHHASLSQIPPAVPSLPHQPALLLSPVPDNAPPSIHSGTQNVSPAGLPRCRSGSYTIGPFSSFQSAAHIYSQKLSRPSSAKAAGSCHPHKHHSGIAKTQKEGEDVSLNRRYNQSLVTAELQRLAEKQAARQYSPASHISLLTQQVTNLNLASSVINRSSASTPPTLRPVISPSGPTWSIQPDLHASETHSSPPGSRSLQTGGFAWEGEVENNAYSKTTGVVPQHKYHPTAGSYQLHFALQQLEQQKLQSRQLLDQSRARHQAIFGSQTLPNSSLWTMNNGPGCRISSATTGGQKPNTLPQKVVAPPNSSTLVSKPASNHKQVLRKPASQRASKGSSAEGQLNGLQSSLNPAAFMPITNSTGSLEAPQVIFARSKPLPTQSGALATVIGQRKSKSVKSGTI

Annotated regions:
Protein sequence:
MEAMKLLNQSQVSEFILLGLTSSQDVEFLLFALFSVIYVVTVLGNLLIIVTVFNTPNLNTPMYFLLGNLSFVDMTLASFATPKVILNLLKKQKVISFAGCFTQIFLLHLLGGVEMVLLVSMAFDRYVAICKPLHYMTIMNKKVCVLLVVTSWLLGLLHSGFQIPFAVNLPFCGPNVVDSIFCDLPLVTKLACIDIYFVQVVIVANSGIISLSCFIILLISYSLILITIKNHSPTGQSKARSTLTAHITVVILFFGPCIFIYIWPFGNHSVDKFLAVFYTIITPILNPIIYTLRNKEMKISMKKLWRAFVNSREDT

Annotated regions:
phrase: GNLLIIVTVFNTPNLNTPMYFLLGNLSFVDMTLASFATPKVILNLLKKQKVISFAGCFTQIFLLHLLGGVEMVLLVSMAFDRYVAICKPLHYMTIMNKKVCVLLVVTSWLLGLLHSGFQIPFAVNLPFCGPNVVDSIFCDLPLVTKLACIDIYFVQVVIVANSGIISLSCFIILLISYSLILITIKNHSPTGQSKARSTLTAHITVVILFFGPCIFIYIWPFGNHSVDKFLAVFYTIITPILNPII
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM
Protein sequence:
MNAAPITQDLLTIPRKLPETAGRNLVGLTREQLHEALIQAGTPERQARMRVGQIWQWIYHWGVRDFAQMTNLAKDYRALLAENFEIALPEIVTRQISADGTRKYLLRISGGHEVETVYIPEENRGTLCISSQVGCTLTCSFCHTGTQKLVRNLTAGEIVGQVMVARDDLGEWPKPGAPKDETRLVSNVVLMGMGEPLYNFDNVRDAMKVVMDGEGISLSRRRITLSTSGIVPEIAKTAEEIGCLLAVSFHATTDETRDKLVPVNRKWNIETLLNALREYPRLSNSERITFEYVMLDGVNDSDEDARRLVRLIRGIPAKVNLIPFNEWPGSPYRRSGWERIEAFADIVHKAGYASPIRTPRGEDIMAACGQLKSATERGRKTAAQIAAEARA

Annotated regions:
phrase: NLVGLTREQLHEALIQAGTPERQARMRVGQIWQWIYHWGVRDFAQMTNLAKDYRALLAENFE
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: EENRGTLCISSQVGCTLTCSFCHTGTQKLVRNLTAGEIVGQVMVARDDLGEWPKPGAPKDETRLVSNVVLMGMGEPLYNFDNVRDAMKVVMDGEGISLSRRRITLSTSGIVPEIAKTAEEIGCLLAVSFHATTDETRDKLVPVNRKWNIETLLNALREYPRLSNSERITFEYVMLDGVNDSDEDARRLVRLIRGIPAKVNLIPFNEWPGSPYRRSGWERIEAFADIVHKAGYASPIRTPRGE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SSQVGCTLTCSFCHTGTQKLVRNLTAGEIVGQVMVARDDLGEWPKPGAPKDETRLVSNVVLMGMGEPLYNFDNVRDAMKVVMDGEGISLSRRRITLSTSGIVPEIAKTAEEIGCLLAVSFHATTDETRDKLVPVNRKWNIETLLNALREYPRLSNSERITFEYVMLDGVNDSDEDARR
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MEMEKEENVVYGPLPFYPIEEGSAGIQLHKYMHQYAKLGAIAFSNALTGVDISYQEYFDITCRLAEAMKNFGMKPEEHIALCSENCEEFFIPVLAGLYIGVAVAPTNEIYTLRELNHSLGIAQPTIVFSSRKGLPKVLEVQKTVTCIKKIVILDSKVNFGGHDCMETFIKKHVELGFQPSSFVPIDVKNRKQHVALLMNSSGSTGLPKGVRITHEGAVTRFSHAKDPIYGNQVSPGTAILTVVPFHHGFGMFTTLGYFACGYRVVMLTKFDEELFLRTLQDYKCTSVILVPTLFAILNKSELIDKFDLSNLTEIASGGAPLAKEVGEAVARRFNLPGVRQGYGLTETTSAFIITPEGDDKPGASGKVVPLFKVKVIDLDTKKTLGVNRRGEICVKGPSLMLGYSNNPEATRETIDEEGWLHTGDIGYYDEDEHFFIVDRLKSLIKYKGYQVPPAELESVLLQHPNIFDAGVAGVPDPDAGELPGAVVVMEKGKTMTEKEIVDYVNSQVVNHKRLRGGVRFVDEVPKGLTGKIDAKVIREILKKPQAKM

Annotated regions:
phrase: ELESVLLQHPNIFDAGVAGVPDPDAGELPGAVVVMEKGKTMTEKEIVDYVNSQVVNHKRLRGGVRFVDEVPKGLTG
type: DOMAIN
name: AMP-bd_C
description: AMP-binding enzyme, C-terminal domain

phrase: AFSNALTGVDISYQEYFDITCRLAEAMKNFGMKPEEHIALCSENCEEFFIPVLAGLYIGVAVAPTNEIYTLRELNHSLGIAQPTIVFSSRKGLPKVLEVQKTVTCIKKIVILDSKVNFGGHDCMETFIKKHVELGFQPSSFVPIDVKNRKQHVALLMNSSGSTGLPKGVRITHEGAVTRFSHAKDPIYGNQVSPGTAILTVVPFHHGFGMFTTLGYFACGYRVVMLTKFDEELFLRTLQDYKCTSVILVPTLFAILNKSELIDKFDLSNLTEIASGGAPLAKEVGEAVARRFNLPGVRQGYGLTETTSAFIITPEGDDKPGASGKVVPLFKVKVIDLDTKKTLGVNRRGEICVKGPSLMLG
type: DOMAIN
name: AMP-dep_synth/lig_dom
description: AMP-dependent synthetase/ligase domain

phrase: LMNSSGSTGLP
type: CONSERVED_SITE
name: AMP-binding_CS
description: AMP-binding, conserved site
Protein sequence:
MASPALTGGYRNLTAPVSLLRTLASTRVTTPLFRSNKHSPRFISSPKRFTCLSLLKTDSQNQTTLSSSSNSGYHEYNRLMPCPAYNLPPRIEHMVVLEDDVLVSEFISKQLDLPPLYVADLIRFGAVHYALVCPKPPPTATPEEIILFEEVTSPSVLKKRSSIKGKTVREAQKTFRVTHTNQYAEAGTYLRVHVHPKRSPRCYEIDWKSRIVAVTDSYVILDKPAGTTVGGTTDNIEESCATFASRALDLPEPLKTTHQIDNCTEGCVVFARTKEYCSVFHTKIRNKEVKKLYRALAAAPLPIGIISHYMRPKNMAPRLVAEDSIQGWHLCQLEVLECKKIPWPDAATEKKHDIEDCGWTSKEFAYECTINLLTGKTHQIRAQLAACGAPLVGDSMYMPAAIAEMGNPDTNPYGKAKKHYTMEENQKETAVAEWIDRHGKEPRVGIGLQACQISWDDDDGEHFYEAGTPWWR

Annotated regions:
phrase: YVILDKPAGTTVGGTTDNIEESCATFASRALDLPEPLKTTHQIDNCTEGCVVFARTKEYCSVFHTKIRNKEVKKLYRALAAAPLPIGIISHYMRPKNMAPRLVAEDSIQGWHLCQLEVLECKKIPWPDAATEKKHDIEDCGWTSKEFAYECTINLLTGKTHQIRAQLAACGAPLVGDSMYMPAAIAEMGN
type: DOMAIN
name: PsdUridine_synth_RsuA/RluA
description: Pseudouridine synthase, RsuA/RluA-like

phrase: YVILDKPAGTTVGGTTDNIEESCATFASRALDLPEPLKTTHQIDNCTEGCVVFARTKEYCSVFHTKIRNKEVKKLYRALAAAPLPIGIISHYMRPKNMAPRLVAEDSIQGWHLCQLEVLECKKIPWPDAATEKKHDIEDCGWTSKEFAYECTINLLTGKTHQIRAQLA
type: DOMAIN
name: PsdUridine_synth_RsuA/RluA
description: Pseudouridine synthase, RsuA/RluA-like
Protein sequence:
MSKPVDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKPKTLLKKDKFAFPVPYGLGGVADAEHPALKAGAGLHAGAGGGLVPESLLANPEKAAAAAAAAAARVFFPQSAAAAAAAAAAAAAGSPYSLLDLGSKMAEISSSSSGLPYASSLGYPTAGAGAFHGAAAAAAAAAAAAGGHTHSHPSPGNPGYMIPCNCSAWPSPGLQPPLAYILLPGMGKPQLDPYPAAYAAAL

Annotated regions:
phrase: VKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRLRAMHMKEHPDY
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain

phrase: VKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRLRAMHMKEHPDY
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain

phrase: HVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDEAKRLRAMHMKEHPDYK
type: DOMAIN
name: HMG_box_dom
description: High mobility group box domain
Protein sequence:
MNIHSDSPRQCLEEIIKSASAKFNESIDIAVNLGIDSRKSEEQVRGTVVLPKGIGKDIKVAVFTQGKHLLEAEKAGANIVGGEDLVQEIKKGKKLDVDWCITTPDFIAKITPIAKILGAKGLMPNPKFGTMTSNVAEAIKTIKSGQIKFRTDKNGIIHGKLGNIKFSVDDLLKNLKAFLKVIKSNKPISVKGVYFKSVFLNSTMGKAYKMSKVEDII

Annotated regions:
Protein sequence:
MENKDGFLVINKDKGCTSHDCVKQIRKLLNTRKVGHTGTLDPEVIGTLPIAIGSATRFIQYLPQGKTYIGQIKLGIRTNTDDIHGEIINQKCWPKISDEKLDQYLNKFRGLIKQIPPKVSSVHVNGERAYKKSFNNENFELAPREVKIDELILMKWDQINGIIELKINCSAGTYIRAIARDLGEILNSEGCLLQLKRISACGFHEKNSIKISDIKKGIDQKNASNFIIPTISALNHISTLILNKEEDINFWQTGRAIKFDINYFNEGNNFDNKKPIKVVDKRKMLLGIGFLNKELTNINPKLVLNAK

Annotated regions:
phrase: RKLLNTRKVGHTGTLDPEVIGTLPIAIGSATRFIQYLPQGKTYIGQIKLGIRTNTDDIHGEIINQKCWPKISDEKLDQYLNKFRGLIKQIPPKVSSVHVNGERAYKKSFNNENFELAPREVKIDELILMKWDQINGIIELKINCSAGTY
type: DOMAIN
name: PsdUridine_synth_N
description: Pseudouridine synthase II, N-terminal
Protein sequence:
MNRKQIAKGKLVRRFGINIFEQPKYDKILKKKPHPPGMHGKARKAKITEYGKQLIEKQKIKFTYGVSERQLTNTFKEAKKHHGVTGDNLLSILERRIDNIVYRAGFAISRAHARQIVSHGIIILNGRRVTIPSIILRANDQIQIKEKDSLKKLIRSNIEKTSSLRNLPTWIEVNADDLNIKVKHAPSRDEIPTLANEQMVVEYYSKRA

Annotated regions:
phrase: AKGKLVRRFGINIFEQPKYDKILKKKPHPPGMHGKARKAKITEYGKQLIEKQKIKFTYGVSERQLTNTFKEAKKHHGVTGDNLLSIL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: LERRIDNIVYRAGFAISRAHARQI
type: CONSERVED_SITE
name: Ribosomal_uS4_CS
description: Small ribosomal subunit protein uS4, conserved site

phrase: RRIDNIVYRAGFAISRAHARQIVSHGIIILNGRRVTIPSIILRANDQIQIKEKDSLKKLIRSNI
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: RKQIAKGKLVRRFGINIFEQPKYDKILKKKPHPPGMHGKARKAKITEYGKQLIEKQKIKFTYGVSERQLTNTFKEAKKHHGVTGDNLLSIL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: RRIDNIVYRAGFAISRAHARQIVSHGIIILNGRRVTIPSIILRANDQ
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain
Protein sequence:
MSIKRIIPCLDVKDSRVVKGINFVNLKDMGDPVELARAYDQAGADELVFLDISKTQDGHDLMLDVIEKTAQAISIPLTVGGGIQTLADIDRILAAGASAVSIGTAALKDPGFVTEAVAKYGSQKLVAAVDIQFDPEQGDFYVYSHGGNQRTDWKAFDWLIECEKLGFGQLLITNKDRDGVQNGFDLDFLKQASQVVSIPIIASGGAGSIDDFVTLFEETTISAGLAASIFHNGTVTISDLKSRLVEGGIAILPTKKPNFEKANGLISAILQDVNTKQVLMNGFMNEEAYRLTIQDNVVWFYSRTKNRLWKKGETSQHYQYVKGMSLDCDADALLIQVQPAGPTCHLGTASCFDQTDFSLNQLFQTVKSKLEKREEGSYTAYLAQEGLDKILKKCGEELTETVIAAKNNDAEELVSESSDLLYHLFVLLAYQGVDLSDVEAQLASRHGTKQNYRVRKTINQW

Annotated regions:
phrase: MNGFMNEEAYRLTIQDNVVWFYSRTKNRLWKKGETSQHYQYVKGMSLDCDADALLIQVQPAGPTCHLGTASC
type: DOMAIN
name: PRib_AMP_CycHydrolase_dom
description: Phosphoribosyl-AMP cyclohydrolase domain
Protein sequence:
MAEEYIPDASVMDTIVPAILGLTAAAVLSSVACICARQMRLRNKKQSQHDASFPFQPTRRPTAVRSPSGQPPHYLKKSPSPTGGKQMGLLSPMQDQSTSPIAQPNVKYSEEGDGPAQHAEQQNGNQLTVVDGNGLKHSLHNSLHHSPVETIANGSVTITLDDHSLTNGKELTVTDQYGKLGTIYFKLRYLAERNALMVSIIRCRGLPCKGGSSGTGDIPTGMNGRTQAATDPYVKLQLLPDKQHKVKTRVVRNTRNPVYDEDFTFYGLNMNDLQNMSLHFVILSFDRYSRDDVIGEVVCPLTSIEIGDISKEALSISKEIQPRSLKIRAQGRGELLISLCWQPAAGRLTVVLLKARNLPRMDVTGLADPYVKIYLLYNGQRIAKKKTHVKKRTLSPVFNESFAFDIPAAEGAGASLEGVSLELMLLDWDRVTKNEVIGRLELGGPNSSSTALNHWNEVCNSPRRQIAEWHKLNE

Annotated regions:
phrase: VTGLADPYVKIY
type: DOMAIN
name: C2_dom
description: C2 domain

phrase: RTLSPVFNESFAF
type: DOMAIN
name: C2_dom
description: C2 domain

phrase: KLGTIYFKLRYLAERNALMVSIIRCRGLPCKGGSSGTGDIPTGMNGRTQAATDPYVKLQLLPDKQHKVKTRVVRNTRNPVYDEDFTFYGLNMNDLQNMSLHFVILSFDRYSRDDVIGEVVCPLTSIEIGDISKEA
type: DOMAIN
name: C2_dom
description: C2 domain

phrase: GRGELLISLCWQPAAGRLTVVLLKARNLPRMDVTGLADPYVKIYLLYNGQRIAKKKTHVKKRTLSPVFNESFAFDIPAAEGAGASLEGVSLELMLLDWDRVTKNEVIGRLELGGPNSSSTALNHWNEVCNSPRRQIAEW
type: DOMAIN
name: C2_dom
description: C2 domain

phrase: GRLTVVLLKARNLPRMDVTGLADPYVKIYLLYNGQRIAKKKTHVKKRTLSPVFNESFAFDIPAAEGAGASLEGVSLELMLLDWDRVTKNEVIGRLELGGPNSSSTALNHW
type: DOMAIN
name: C2_dom
description: C2 domain

phrase: ALMVSIIRCRGLPCKGGSSGTGDIPTGMNGRTQAATDPYVKLQLLPDKQHKVKTRVVRNTRNPVYDEDFTFYGLNMNDLQNMSLHFVILSFDRYSRDDVIGEVVCPLTSIEIG
type: DOMAIN
name: C2_dom
description: C2 domain

phrase: RLTVVLLKARNLPRMDVTGLADPYVKIYLLYNGQRIAKKKTHVKKRTLSPVFNESFAFDIPAAEGAGASLEGVSLELMLLDWDRVTKNEVIGRLELGGPNSSSTALNHWNEVCNSPRRQI
type: DOMAIN
name: C2_dom
description: C2 domain

phrase: ALMVSIIRCRGLPCKGGSSGTGDIPTGMNGRTQAATDPYVKLQLLPDKQHKVKTRVVRNTRNPVYDEDFTFYGLNMNDLQNMSLHFVILSFDRYSRDDVIGEVVCPLTSIEIGDISKE
type: DOMAIN
name: C2_dom
description: C2 domain

phrase: LLISLCWQPAAGRLT
type: DOMAIN
name: Synaptotagmin
description: Synaptotagmin

phrase: VVLLKARNLPRMD
type: DOMAIN
name: Synaptotagmin
description: Synaptotagmin

phrase: TKNEVIGRLE
type: DOMAIN
name: Synaptotagmin
description: Synaptotagmin
Protein sequence:
MSKKRSIFEEVSEAQPKAQPVQPGVIDRAARTGARGAVRVWLMMLFGLVVIMIAVGGLTRLTDSGLSITEWAPIAGAIPPLSAEDWAREFDLYRAIPEYQLQNKGMTLAEFQFIYWWEWGHRQLGRVIGLVWALGFFGFLVTRKIPPGWTGRLFLLGVLGGLQGAIGWWMVASGLTGTMLDVASYRLATHLGLAFFILGLIAWYIMVLGRPERDLLQARRSGEAGLVTGANWLMGLAAVQILLGALVAGIDAGRTYTDWPLMAGGFLPLNMWELEPIWRNFFEDPGLVQFNHRMVGYLLLLVGLYVWWRSRRSAHVTTKRAFDWVAVILFGQMVLGIVTVLNAAPWTWAIAHQFGAVVTICLILRARFRARYPVATSLRGAVA

Annotated regions:
Protein sequence:
MSNIQNMSLEDIMGERFGRYSKYIIQERALPDIRDGLKPVQRRILYSMNKDGNTFEKGYRKSAKSVGNIMGNFHPHGDSSIYDAMVRMSQDWKNREILVEMHGNNGSMDGDPPAAMRYTEARLSEIAGYLLQDIEKNTVSFAWNFDDTEKEPTVLPAAFPNLLVNGSSGISAGYATDIPPHNLSEVIDAVVYMIDHPKASLEKLMEFLPGPDFPTGGIIQGADEIKKAYETGKGRVVVRSRTEIEELKGGKQQIIVTEIPYEVNKAVLVKKIDDVRVNNKVPGIVEVRDESDRTGLRIAIELKKEADSQTILNYLLKYTDLQVNYNFNMVAIDHFTPRQVGLQKILSSYISHRKDIIIERSKFDKAKAEKRLHIVEGLIRVLSILDEIIALIRSSDNKADAKENLKVSYDFSEEQAEAIVTLQLYRLTNTDIVTLQNEENDLRDLITTLSAIIGDEATMYNVMKRELREVKKKFANPRLSELQAESQIIEIDTASLIAEEETFVSVTRGGYLKRTSPRSFNASSLEEVGKRDDDELIFVKQAKTTEHLLLFTTLGNVIYRPIHELTDLRWKDIGEHLSQTISNFATEEEILYADIVTSFDQGLYVAVTQNGFIKRFDRKELSPWRTYKSKSTKYVKLKDDKDRVVTLSPVIMEDLLLVTKNGYALRFSSQEVPIQGLKSAGVKGINLKNDDSLASAFAVTSNSFFVLTQRGSLKRMAVDDIPQTSRANRGLLVLRELKTKPHRVFLAGGVQSDTSAEQFDLFTDIPEEETNQQMLEVISKTGQTYEIALETLSLSERISNGSFISDTISDQEVLVARTR

Annotated regions:
phrase: MSLEDIMGERFGRYSKYIIQERALPDIRDGLKPVQRRILYSMNKDGNTFEKGYRKSAKSVGNIMGNFHPHGDSSIYDAMVRMSQDWKNREILVEMHGNNGSMDGDPPAAMRYTEARLSEIAGYLLQDIEKNTVSFAWNFDDTEKEPTVLPAAFPNLLVNGSSGISAGYATDIPPHNLSEVIDAVVYMIDHPKASLEKLMEFLPGPDFPTGGIIQGADEIKKAYETGKGRVVVRSRTEIEELKGGKQQIIVTEIPYEVNKAVLVKKIDDVRVNNKVPGIVEVRDESDRTGLRIAIELKKEADSQTILNYLLKYTDLQVNYNFNMVAIDHFTPRQVGLQKILSSYISHRKDIIIERSKFDKAKAEKRLHIVEGLIRVLSILDEIIALIRSSDNKADAKENLKVSYDFSEEQAEAIVTLQLYRLTNTDIVTLQNEENDLRDLITTLSAIIGDEATM
type: DOMAIN
name: Topo_IIA_dom_A
description: DNA topoisomerase, type IIA, domain A

phrase: AVTQNGFIKRFDRKELSPWRTYKSKSTKYVKLKDDKDRVVTLSP
type: REPEAT
name: GyrA/parC_rep
description: DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat

phrase: FFVLTQRGSLKRMAVDDIPQTSRANRGLL
type: REPEAT
name: GyrA/parC_rep
description: DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat

phrase: EDLLLVTKNGYALRFSSQEVPIQGLKSAGVKGINLKNDDSLASAFA
type: REPEAT
name: GyrA/parC_rep
description: DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat

phrase: EHLLLFTTLGNVIYRPIHELTDLRWKDIGEHLSQTISNFATEEEILYADI
type: REPEAT
name: GyrA/parC_rep
description: DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat

phrase: RALPDIRDGLKPVQRRILYSMNKDGNTFEKGYRKSAKSVGNIMGNFHPHGDSSIYDAMVRMSQDWKNREILVEMHGNNGSMDGDPPAAMRYTEARLSEIAGYLLQDIEKNTVSFAWNFDDTEKEPTVLPAAFPNLLVNGSSGISAGYATDIPPHNLSEVIDAVVYMIDHPKASLEKLMEFLPGPDFPTGGIIQGADEIKKAYETGKGRVVVRSRTEIEELKGGKQQIIVTEIPYEVNKAVLVKKIDDVRVNNKVPGIVEVRDESDRTGLRIAIELKKEADSQTILNYLLKYTDLQVNYNFNMVAIDHFTPRQVGLQKILSSYISHRKDIIIERSKFDKAKAEKRLHIVEGLIRVLSILDEIIALIRSSDNKADAKENLKVSYDFSEEQAEAIVTLQLYRLTNTDIVTLQNEENDLRDLITTLSAIIGDEATMYNVMKRE
type: DOMAIN
name: Topo_IIA_dom_A
description: DNA topoisomerase, type IIA, domain A

phrase: QERALPDIRDGLKPVQRRILYSMNKDGNTFEKGYRKSAKSVGNIMGNFHPHGDSSIYDAMVRMSQDWKNREILVEMHGNNGSMDGDPPAAMRYTEARLSEIAGYLLQDIEKNTVSFAWNFDDTEKEPTVLPAAFPNLLVNGSSGISAGYATDIPPHNLSEVIDAVVYMIDHPKASLEKLMEFLPGPDFPTGGIIQGADEIKKAYETGKGRVVVRSRTEIEELKGGKQQIIVTEIPYEVNKAVLVKKIDDVRVNNKVPGIVEVRDESDRTGLRIAIELKKEADSQTILNYLLKYTDLQVNYNFNMVAIDHFTPRQVGLQKILSSYISHRKDIIIERSKFDKAKAEKRLHIVEGLIRVLSILDEIIALIRSSDNKADAKENLKVSYDFSEEQAEAIVTLQLYRLTNTDIVTLQNEENDLRDLITTLSAIIGDEATMYNVMKRELRE
type: DOMAIN
name: Topo_IIA_dom_A
description: DNA topoisomerase, type IIA, domain A
Protein sequence:
MELETHLSKYFTLAFTHKSMSLEMREKLAINSPIMLKELLQTIKTHCPNIKECMVLSTCNRFEIYASLKHGANTHEQKSALLKILAQNKKMSVSDLEKCVLINTDESAVHHVFSVCSSLDSLVVGETQITGQMKNAYKFAFEEKFCSKDLTRLLHFAFKCAAKVRNLTGISKQGVSISSVAVKEALSIFEKERIKDKKALVIGLGEMAQLVIKHLLNKQFEVLILGRNAAKFEDFVKELEEPKKVGFQNVENLNAYINEYELLFCATSSPNFIVRNSMLKETIFRRFWFDLAVPRNIEKPTLNHIFLYSVDDLEPMVKENVGNRQESRTKAYEIVGLATMEFYQWIQSLEVEPLIKDLRELARISAQKELQKALKKRYVPKEYEGNIEKILHNAFNTFLHHPTIALKKNAQKEESDVLVGAIKNLFNLDKSNANHAQNLNLYKCEYYEE

Annotated regions:
phrase: ALSIFEKERIKDKKALVIGLGEMAQLVIKHLLNKQFEVLILGRNAAKFEDFVKELEEPKKVGFQNVENLNAYINEYELLFCATSSPNFIVRNSMLKETIFRRFWFDLAVPRNIEKPTLNHIFLYSVDDLE
type: DOMAIN
name: Shikm_DH/Glu-tRNA_Rdtase
description: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase

phrase: AFTHKSMSLEMREKLAINSPIMLKELLQTIKTHCPNIKECMVLSTCNRFEIYASLKHGANTHEQKSALLKILAQNKKMSVSDLEKCVLINTDESAVHHVFSVCSSLDSLVVGETQITGQMKNAYKFAFEEKFCSKDLTRLLHFAFKCAAKVRNL
type: DOMAIN
name: 4pyrrol_synth_GluRdtase_N
description: Glutamyl-tRNA reductase, N-terminal

phrase: HVFSVCSSLDSLVVGETQITGQM
type: CONSERVED_SITE
name: GluRdtase_CS
description: Glutamyl-tRNA reductase, conserved site

phrase: KAYEIVGLATMEFYQWIQSLEVEPLIKDLRELARISAQKELQKALKKRYVPKEYEGNIEKILHNAFNTFLHHPTIALKKNAQKEESDVLVGAIKNLFN
type: DOMAIN
name: 4pyrrol_synth_GluRdtase_dimer
description: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain
Protein sequence:
MCDDDVAALVIDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPMEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPAFLGMESAGIHETCYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF

Annotated regions:
phrase: YVGDEAQSKR
type: CONSERVED_SITE
name: Actin_CS
description: Actin, conserved site

phrase: LLTEAPLNPKAN
type: CONSERVED_SITE
name: Actin/actin-like_CS
description: Actin/actin-like conserved site

phrase: WISKQEYD
type: CONSERVED_SITE
name: Actin_CS
description: Actin, conserved site