nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MSTKYIFVTGGVLSSLGKGITAASIGTLLKHSGFRVGVLKLDPYINVDPGTMSPLEHGEVFVTKDGAETDLDLGHYERFLDTSLTQDNNFTTGRIYKSVIENEREGKYLGKTIQIVPHITNEIKERIIKAGETKDILLVELGGTTGDMEGMPFLETIRQMKHEMGRDNVMSIHVTLLPYIRTAGEIKTKPTQHSVQELRRIGITPQMLILRSEERVPSDIKRKIAYTCDVDEASVIEAIDAPTIYEVPLNFMAQDILDPIAKELNLGELKPDMQLWGELVHRIIQPTKKTTIAFVGKYLDLKESYKSLTEALIHAGAHLDTDVKIKWVDSEKVENNGARQYLVDCDGILVAGGFGERGVEGKIETIKYAREEKIPFLGICLGMQLAMVEFSRNVLGLEDATSVEFNSETENPIIFLIDEFIDALGSRQVRTSTSPMGGTMRLGEYECDTKEGSNLREAYGASTIFERHRHRYEANPKYRADLEANGMEITGESNGLIEAVEVTDHPWFLGVQFHPEFTSRLQNPNPSILSFVKNALEK

Annotated regions:
phrase: KESYKSLTEALIHAGAHLDTDVKIKWVDSEKVENNGARQYLVDCDGILVAGGFGERGVEGKIETIKYAREEKIPFLGICLGMQLAMVEFSRNVLGLEDATSVEFNSETENPIIFLIDEFIDALGSRQVRTSTSPMGGTMRLGEYECDTKEGSNLREAYGASTIFERHRHRYEANPKYRADLEANGMEITGESNGLIEAVEVTDHPWFLGVQFHPEFTSRLQNPNPSILS
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: KYIFVTGGVLSSLGKGITAASIGTLLKHSGFRVGVLKLDPYINVDPGTMSPLEHGEVFVTKDGAETDLDLGHYERFLDTSLTQDNNFTTGRIYKSVIENEREGKYLGKTIQIVPHITNEIKERIIKAGETKDILLVELGGTTGDMEGMPFLETIRQMKHEMGRDNVMSIHVTLLPYIRTAGEIKTKPTQHSVQELRRIGITPQMLILRSEERVPSDIKRKIAYTCDVDEASVIEAIDAPTIYEVPLNFMAQDILDPIA
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: TIAFVGKYLDLKESYKSLTEALIHAGAHLDTDVKIKWVDSEKVENNGARQYLVDCDGILVAGGFGERGVEGKIETIKYAREEKIPFLGICLGMQLAMVEFSRNVLGLEDATSVEFNSETENPIIFLIDEFIDALGSRQVRTSTSPMGGTMRLGEYECDTKEGSNLREAYGASTIFERHRHRYEANPKYRADLEANGMEITGESNGLIEAVEVTDHPWFLGVQFHPEFTSRLQNPNPSILSF
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain

phrase: KYIFVTGGVLSSLGKGITAASIGTLLKHSGFRVGVLKLDPYINVDPGTMSPLEHGEVFVTKDGAETDLDLGHYERFLDTSLTQDNNFTTGRIYKSVIENEREGKYLGKTIQIVPHITNEIKERIIKAGETKDILLVELGGTTGDMEGMPFLETIRQMKHEMGRDNVMSIHVTLLPYIRTAGEIKTKPTQHSVQELRRIGITPQMLILRSEERVPSDIKRKIAYTCDVDEASVIEAIDAPTIYEVPLNFMAQDILDPIAKELN
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal
Protein sequence:
MGKLLKPIKDVGIVGYGAYVPMYRIRNEEIGRVWGISNFPIEEKAVPGLDEDAITIGIEAARNALKRAKIDPKDIRAIWFGSESKPYAVKPSSTVIAEAIGATPDLEAADFEFACKAGTEALQAAIGFVASGMAKYAMAIGADTAQGRPGDHLEFTAGAGGAAFIIGEKSSETVAYFEGSYSYVTDTPDFWRRQHEHYPRHGNRFTGEPAYFHHVVTAAKTLMDELGLTPEDFDYAVFHQPNVKFPLVAARMLGIPKEKVLPGLLSGRIGNTYSGATMVGISAVLDIAKPGDRILWVSFGSGAGSDAFSIVVQDAIEEKRNLAPKVEDYIKRRKVIDYALYAKARRKYII

Annotated regions:
phrase: DELGLTPEDFDYAVFHQPNVKFPLVAARMLGIPKEKVLPGLLSGRIGNTYSGATMVGISAVLDIAKPGDRILWVSFGSGA
type: DOMAIN
name: ACP_syn_III_C
description: Beta-ketoacyl-[acyl-carrier-protein] synthase III, C-terminal
Protein sequence:
MQVKENKQLCLISLGCSKNLVDSEVMLGKLYNYTLTNDVKSADVILINTCGFIESAKQESIQTILNAAKDKKEGAILIASGCLSERYKDEIKELIPEVDIFTGVGDYDKIDIMIAKKQNQFSEQVFLSEHYNARIITGSSVHAYVKISEGCNQKCSFCAIPSFKGKLQSRELDSILKEVEDLALKGYKDMTFIAQDSSSFLYDKGQKDGLIQLIRAIDKQQALKSARILYLYPSSTTLELIGAIESSPIFQNYFDMPIQHISDSMLKKMRRNSSQAHHLKLLNAMKQVKESFIRSTIIVGHPEENEGEFEELSAFLDEFRFDRLNIFAFSAEENTHAYSLEKVPKKTINARIKALNKIALKHQNHSFKALLNKPIKALVENKEGEYFYKARDLRWVPEVDGEILINDSELTTPLKPGHYTIMPSAFKDNILLAKVLSPF

Annotated regions:
phrase: KISEGCNQKCSFCAIPSFKGKLQSRELDSILKEVEDLALKGYKDMTFIAQDSSSFLYDKGQKDGLIQLIRAIDKQQALKSARILYLYPSSTTLELIGAIESSPIFQNYFDMPIQHISDSMLKKMRRNSSQAHHLKLLNAMKQVKESFIRSTIIVGHPEENEGEFEELSA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VKISEGCNQKCSFCAIPSFK
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: CLISLGCSKNLVDSEVMLGKLYNYTLTNDVKSADVILINTCGFIESAKQESIQTILNAAKDKKEGAILIASGCLSERYKDEIKELIPEVDIFT
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: VHAYVKISEGCNQKCSFCAIPSFKGKLQSRELDSILKEVEDLALKGYKDMTFIAQDSSSFLYDKGQKDGLIQLIRAIDKQQALKSARILYLYPSSTTLELIGAIESSPIFQNYFDMPIQHISDSMLKKMRRNSSQAHHLKLLNAMKQVKESFIRSTIIVGHPEENEGEFEELSAFLDEFRFDRLNIFAFSAEENTHAYSLEKVPKKTINARIK
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: KQLCLISLGCSKNLVDSEVMLGKLYNYTLTNDVKSADVILINTCGFIESAKQESIQTILNAAKDKKEGAILIASGCLSERYKDEIKELIPEVDIFTGVGDYDKIDIMIAKKQ
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: TGSSVHAYVKISEGCNQKCSFCAIPSFKGKLQSRELDSILKEVEDLALKGYKDMTFIAQDSSSFLYDKGQKDGLIQLIRAIDKQQALKSARILYLYPSSTTLELIGAIESSPIFQNYFDMPIQHISDSMLKKMRRNSSQAHHLKLLNAMKQVKESFIRSTIIVGHPEENEGEFEELSAFLDEFRFDRLNIFAFSAEENTHAYSLEKVPKKTINARIKALNKIALKHQNHSF
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEYGVQLREKQKVRRMYGVLEKQFRNYYKDAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAESRQLVSHKSILVNGKVVNVPSFKVAANDVVSIREKAKQQSRIKAALEVAEQREKPTWIEVDAGKMEGTFKRLPERSDLSADINEHLIVELYSK

Annotated regions:
phrase: RYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEYGVQLREKQKVRRMYGVLEKQFRNYYKDAARLKGNTGENLLQLL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: GRLDNVVYRMGFGATRAESRQLVSHKSILVNGKVVNVPSFKVAANDVVSIREKAKQQSRIKAAL
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: RLDNVVYRMGFGATRAESRQLVSHKSILVNGKVVNVPSFKVAANDV
type: DOMAIN
name: S4_RNA-bd
description: RNA-binding S4 domain

phrase: RYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEYGVQLREKQKVRRMYGVLEKQFRNYYKDAARLKGNTGENLLQLL
type: DOMAIN
name: Ribosomal_uS4_N
description: Small ribosomal subunit protein uS4, N-terminal

phrase: LEGRLDNVVYRMGFGATRAESRQL
type: CONSERVED_SITE
name: Ribosomal_uS4_CS
description: Small ribosomal subunit protein uS4, conserved site
Protein sequence:
MALSLEEFVHSLDLRTLPRVLEIQAGIYLEGSIYEMFGNECCFSTGEVIKITGLKVKKIIAEICEQIEGCESLQPFELPMNFPGLFKIVADKTPYLTMEEITRTIHIGPSRLGHPCFYHQKDIKLENLIIKQGEQIMLNSVEEIDGEIMVSCAVARNHQTHSFNLPLSQEGEFYECEDERIYTLKEIVEWKIPKNRTRTVNLTDFSNKWDSTNPFPKDFYGTLILKPVYEIQGVMKFRKDIIRILPSLDVEVKDITDSYDANWFLQLLSTEDLFEMTSKEFPIVTEVIEAPEGNHLPQSILQPGKTIVIHKKYQASRILASEIRSNFPKRHFLIPTSYKGKFKRRPREFPTAYDLEIAKSEKEPLHVVATKAFHSPHDKLSSVSVGDQFLVHQSETTEVLCEGIKKVVNVLACEKILKKSYEAALLPLYMEGGFVEVIHDKKQYPISELCKQFRLPFNVKVSVRDLSIEEDVLAATPGLQLEEDITDSYLLISDFANPTECWEIPVGRLNMTVQLVSNFSRDAEPFLVRTLVEEITEEQYYMMRRYESSASHPPPRPPKHPSVEETKLTLLTLAEERTVDLPKSPKRHHVDITKKLHPNQAGLDSKVLIGSQNDLVDEEKERSNRGATAIAETFKNEKHQK

Annotated regions:
phrase: LPRVLEIQAGIYLEGSIYEMFGNECCFSTGEVIKITGLKVKKIIAEICEQIEGCESLQPFELPMNFPGLFKIVADKTPYLTMEEITRTIHIGPSRLGHPCFYHQKDIKLENLIIKQGEQIMLNSVEEIDGEIMVSCAVARNHQTHSFNLPLSQEGEFYECEDERIYTLKEIVEWKIPKNRTRTVNLTDFSNKWDSTNPFPKDFYGTLILKPVYEIQGVMKFRKDIIRILPSLDVEVKDITDSYDANW
type: DOMAIN
name: CABIT_dom
description: CABIT domain

phrase: FPIVTEVIEAPEGNHLPQSILQPGKTIVIHKKYQASRILASEIRSNFPKRHFLIPTSYKGKFKRRPREFPTAYDLEIAKSEKEPLHVVATKAFHSPHDKLSSVSVGDQFLVHQSETTEVLCEGIKKVVNVLACEKILKKSYEAALLPLYMEGGFVEVIHDKKQYPISELCKQFRLPFNVKVSVRDLSIEEDVLAATPGLQLEEDITDSYLLISDFANPTECWEIPVGRLNMTVQLVSNFSRDA
type: DOMAIN
name: CABIT_dom
description: CABIT domain
Protein sequence:
MPKQKTNRAAAKRFKVTAKGKIKSANAFTSHRFHGKTKKQRRQLRGTAIIEKPMVKTYHKLLQK

Annotated regions:
phrase: KTNRAAAKRFKVTAKGKIKSANAFTS
type: CONSERVED_SITE
name: Ribosomal_bL35_CS
description: Large ribosomal subunit protein bL35, conserved site
Protein sequence:
MSSEELPSCGINDNDINNTIPINTRKVQIIPNGNTQCVKCLYNVANNVKDKKLSKKEKKEQKLKEEENNNNNNEEPITQQQKPIGKPIINFRSEQLCWECYRELILKKFKLNIVKVRESKRDAEKLLVALSGGTCSSMLLELLKQCTEGSGKAKMFLDIKCVHIDESSITPYQNHNDTIEFLKEFNNVKLGFPNLEIIPLEDILGTVTPLGERTNQLKLQFAQLSSETSKEDLLLYYRNQLLIQVAHKLNCKKVILGTSSNRLAVQLVASTSKGRGFSVPNETSVIIEQPSNDIKFYQPMRDFLLKEIFIYYRHLNILPVPVMFSILNLKPKHSINTLCEDFLHCLQDISNQTVHTLLRSVDKLISPSIDSNYNCSICSSPLTSAEIKSLEKVILDNNNNINKENKNNNNNNNNNNNNNGCCSTTKTEDSSCCNKTEDNSSNNNNNNTGCCSSSSSTSTSSITVNKETLCYSCKILYRDFKSTPNIAPYIKENSKQLLTTSQLKNEIKDFLLNSDDDDDDEDN

Annotated regions:
Protein sequence:
MKLHELKAAEGSRRVRNRVGRGAGSGNGKTSGRGQKGQKARSGGGVRPGFEGGQLPLFRRLPKRGFTNINRKEYAIVNLDQLNKFEDGTEVTPALLVETGVVKNEKSGIKVLGNGSLDKKLTVKAHKFSASAVEAIDAKGGAHEVI

Annotated regions:
phrase: KVLGNGSLDKKLTVKAHKFSASAVEAIDAK
type: CONSERVED_SITE
name: Ribosomal_uL15_CS
description: Large ribosomal subunit protein uL15, conserved site

phrase: IVNLDQLNKFEDGTEVTPALLVETGVVKNEKSGIKVLGNGSLDKKLTVKAHKFSASAVEAIDAKGG
type: DOMAIN
name: Ribosomal_uL15/eL18
description: Large ribosomal subunit protein uL15/eL18
Protein sequence:
MGGKWSKITGWSAVRERMRRTDPTADRVRRRQTGAAADGVGAVSQDLAKHGAITSSNTASTNAACAWVEAQEEDEDVGFPVRPQVPLRPMTYKAAVDLSHFLKEKGGLEGLVWSQKRQDILDMWIYHTQGYFPDWQNYTPGPGTRYPLCFGWCFKLIPVEPEEIEEANKGENNSLLHPMSQHGMDDHEKEVLKWKFDSSLAFHHMAREKHPEFYKDC

Annotated regions:
Protein sequence:
MKTITTDWELIPYSEAWSRQTEWFDALVHAKQNGESYENRIIFCEHPHVYTLGRSGKENNMLLGEEQLKTIGATLYHIDRGGDITYHGPGQLVCYPILNLEEFGLGLKEYVHLLEEAVIRVCASYGVVAGRLEKATGVWLEGDTSRARKICAIGVRSSHYVTMHGLALNVNTDLRYFSYIHPCGFIDKGVTSLQQELGHSIDMAEVKERLGRELLAALLSK

Annotated regions:
phrase: LVHAKQNGESYENRIIFCEHPHVYTLGRSGKENNMLLGEEQLKTIGATLYHIDRGGDITYHGPGQLVCYPILNLEEFGLGLKEYVHLLEEAVIRVCASYGVVAGRLEKATGVWLEGDTSRARKICAIGVRSSHYVTMHGLALNVNTDLRYFSYIHPCGFIDKGVTSLQQELGHSIDMAEVKERLGR
type: DOMAIN
name: BPL_LPL_catalytic
description: Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain

phrase: RGGDITYHGPGQLVC
type: CONSERVED_SITE
name: Octanoyltransferase_CS
description: Octanoyltransferase, conserved site

phrase: ESYENRIIFCEHPHVYTLGRSGKENNMLLGEEQLKTIGATLYHIDRGGDITYHGPGQLVCYPILNLEEFGLGLKEYVHLLEEAVIRVCASYGVVAGRLEKATGVWLEGDTSRARKICAIGVRSSHYVTMHGLALNVNTDLRYFSYIHPCGFIDKGVTSLQQELGHSIDMAEVKERLGRELLAALLS
type: DOMAIN
name: BPL_LPL_catalytic
description: Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain
Protein sequence:
MAVENNTQRSYSIIPCFIFVELVIMAGTVLLAYYFECTDTFQVHIQGFFCQDGDLMKPYPGTEEESFISPLVLYCVLAATPTAIIFIGEISMYFIKSTRESLIAEEKMILTGDCCYLSPLLRRIIRFIGVFAFGLFATDIFVNAGQVVTGHLTPYFLTVCQPNYTSTDCRAHQQFINNGNICTGDLEVIEKARRSFPSKHAALSIYSALYATMYITSTIKTKSSRLAKPVLCLGTLCTAFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMCVVHNFRGTQGSPSKPKPEDPRGVPLMAFPRIESPLETLSAQNHSASMTEVT

Annotated regions:
phrase: IGVFAFGLFATDIFVNAGQVVTGHLTPYFLTVCQPNYTSTDCRAHQQFINNGNICTGDLEVIEKARRSFPSKHAALSIYSALYATMYITSTIKTKSSRLAKPVLCLGTLCTAFLTGLNRVSEYRNHCSDVIAGFILGTAVALFL
type: DOMAIN
name: P_Acid_Pase_2/haloperoxidase
description: Phosphatidic acid phosphatase type 2/haloperoxidase

phrase: FAFGLFATDIFVNAGQVVTGHLTPYFLTVCQPNYTSTDCRAHQQFINNGNICTGDLEVIEKARRSFPSKHAALSIYSALYATMYITSTIKTKSSRLAKPVLCLGTLCTAFLTGLNRVSEYRNHCSDVIAGFILGTAVALFLGMC
type: DOMAIN
name: P_Acid_Pase_2/haloperoxidase
description: Phosphatidic acid phosphatase type 2/haloperoxidase
Protein sequence:
MKMKDELINLIINEGCIKFGHFVLTSGKESNYYIDIKSLITNPKALRIIAKLIKEKAEELNLNYDKIAGPELGAVPIATALSLETNKPLLIVRKKKKEHGTGKVIEGNVQKGDKVLLVEDVTTTGGSVIRAAKILREHGADVVGIFVVVDREEGAKENIEKEGFKFYPLVLVSELFKAAGISKDQS

Annotated regions:
phrase: LIINEGCIKFGHFVLTSGKESNYYIDIKSLITNPKALRIIAKLIKEKAEELNLNYDKIAGPELGAVPIATALSLETNKPLLIVRKKKKEHGTGKVIEGNVQKGDKVLLVEDVTTTGGSVIRAAKILREHGADVVGIFVVVDREEGAKENIEKEGFKFYPLVLVS
type: DOMAIN
name: Or_phspho_trans_dom
description: Orotate phosphoribosyl transferase domain

phrase: IAKLIKEKAEELNLNYDKIAGPELGAVPIATALSLETNKPLLIVRKKKKEHGTGKVIEGNVQKGDKVLLVEDVTTTGGSVIRAAKILREHGADVVGIFVVVDREEGAKENIEKEGFKFYP
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: SLITNPKALRIIAKLIKEKAEELNLNYDKIAGPELGAVPIATALSLETNKPLLIVRKKKKEHGTGKVIEGNVQKGDKVLLVEDVTTTGGSVIRAAKILREHGADVVGIFVVVDREEGAKEN
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain
Protein sequence:
MITLKEALSKPKGELQEIKDELKKRAQEQSEINAYVALDESGEGVPVAIKDNIQVDGWEVTCASKILKGYIAPYDATVIQKLRANGLAPFGRTNMDEFAMGSTTETSCYGKTLNPKDTSRVPGGSSGGSAAAVAAGIAIAALGSDTGGSIRQPAAFCGVVGMKPTYGRVSRYGLAAYGSSLDQIGPMTQNVEDAAILYNIIAGSDAKDSTSARIECKPVVPDPKRKLKIGVVPNYVKDASGAIQKAYDKAIEALKQEGHEIIEISLMDAKYDIASYYITAMAEASTNLSRYDGVRYGYRAEAKNLKEMYLKTRSEGFGEEVKRRILLGTFVLSSGYYDAYYIKAQKARHIIKDEYNKVFEKVDLILSPVAPDVAFEFGAMKTPLEMYLSDVYTIGVNLAGLPAISLPVDEHEGLPVGLQLIGKAFDEQTVFDGAMSLENALK

Annotated regions:
phrase: EGVPVAIKDNIQVDGWEVTCASKILKGYIAPYDATVIQKLRANGLAPFGRTNMDEFAMGSTTETSCYGKTLNPKDTSRVPGGSSGGSAAAVAAGIAIAALGSDTGGSIRQPAAFCGVVGMKPTYGRVSRYGLAAYGSSLDQIGPMTQNVEDAAILYNIIAGSDAKDSTSARIECKPVVPDPKRKLKIGVVPNYVKDASGAIQKAYDKAIEALKQEGHEIIEISLMDAKYDIASYYITAMAEASTNLSRYDGVRYGYRAEAKNLKEMYLKTRSEGFGEEVKRRILLGTFVLSSGYYDAYYIKAQKARHIIKDEYNKVFEKVDLILSPVAPDVAFEFGAMKTPLEMYLSDVYTIGVNLAGLPAISLPVDEHEGLPVGLQLIGKAFDEQT
type: DOMAIN
name: Amidase_dom
description: Amidase signature domain

phrase: GGSSGGSAAAVAAGIAIAALGSDTGGSIRQP
type: CONSERVED_SITE
name: Amidase_CS
description: Amidase, conserved site
Protein sequence:
MSLFGTTSGFGSGGTSMFGSTTTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQAIQIAQHDAPVKTVHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAEELKPRNKK

Annotated regions:
phrase: VFTASCDKTAKMWD
type: CONSERVED_SITE
name: WD40_repeat_CS
description: WD40 repeat, conserved site

phrase: QQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQAIQ
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: VFTASCDKTAKMWD
type: REPEAT
name: G-protein_beta_WD-40_rep
description: G-protein beta WD-40 repeat

phrase: VMTGSWDKTLKFWD
type: REPEAT
name: G-protein_beta_WD-40_rep
description: G-protein beta WD-40 repeat

phrase: LATVGSDGRFSFWD
type: REPEAT
name: G-protein_beta_WD-40_rep
description: G-protein beta WD-40 repeat

phrase: HTGPVLDVCWSDDGSKVFTASCDKTAKMW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: AVNGIAFHPVHGTLATVGSDGRFSFW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: QHDAPVKTVHWIKAPNYSCVMTGSWDKTLKFW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: IAQHDAPVKTVHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMM
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: VMTGSWDKTLKFWD
type: CONSERVED_SITE
name: WD40_repeat_CS
description: WD40 repeat, conserved site

phrase: PAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: SNQAIQIAQHDAPVKTVHWIKAPNYSCVMTGSWDKTLKFW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: PMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: QTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: VNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLK
type: REPEAT
name: WD40_rpt
description: WD40 repeat
Protein sequence:
MLSPKRTRFRKQHRGRMKGISYRGNRICFGKYALQALEPAWITSRQIEAGRRAMTRNVRRGGKIWVRIFPDKPVTVRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARKAISIAASKMPIRTQFIISG

Annotated regions:
phrase: RGNRICFGKYALQALEPAWITSRQIEAGRRAMTRNVRRGGKIWVRIFPDKPVTVRPTETRMGSGKGSPEYWVAVVKPGRILYEMGGVAENIARKAISIAASKMPIRTQF
type: DOMAIN
name: Ribosomal_uL16_dom
description: Large ribosomal subunit protein uL16 domain

phrase: RMGSGKGSPEY
type: CONSERVED_SITE
name: Ribosomal_uL16_CS
description: Large ribosomal subunit protein uL16, conserved site

phrase: RRGGKIWVRIF
type: CONSERVED_SITE
name: Ribosomal_uL16_CS
description: Large ribosomal subunit protein uL16, conserved site
Protein sequence:
MKKRKQYCGYIAIVGKPNVGKSTLINEIIENEISITSKKKNTTQKNILGIKTKQLHQFIYVDTPGIYLNNEKDDSFKIIKSSILILFIVDRTVWKTDDEIVLNKIKKNKIPIICVINKIDKILDKSIILPHINFLLKKINPIEIIPISAKKRENIVLLENLIYPYLPNNNHIFPKKYITTHSLSFSISEIIRQKLIFFLRDELPSIITVKIESIEEKFKKKLYIRAAIYVKHERQKKIIIGKKAEGIKKISIASRLDIEKKINMKIYLIIWVKVKIKK

Annotated regions:
phrase: YCGYIAIVGKPNVGKSTLINEIIENEISITSKKKNTTQKNILGIKTKQLHQFIYVDTPGIYLNNEKDDSFKIIKSSILILFIVDRTVWKTDDEIVLNKIKKNKIPIICVINKIDKILDKSIILPHINFLLKKINPIEIIPISAKKRENIVLLENLIYPYLP
type: DOMAIN
name: G_ERA_dom
description: Era-type guanine nucleotide-binding (G) domain

phrase: ELPSIITVKIESIEEKFKKKLYIRAAIYVKHERQKKIIIGKKAEGIKKISIASRLDIEKKINMKIYLIIWVKV
type: DOMAIN
name: KH_dom_type_2
description: K Homology domain, type 2

phrase: IAIVGKPNVGKSTLINEIIENEISITSKKKNTTQKNILGIKTKQLHQFIYVDTPGIYLNNEKDDSFKIIKSSILILFIVDRTVWKTDDEIVLNKIKKNKIPIICVIN
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: QYCGYIAIVGKPNVGKSTLINEIIENEISITSKKKNTTQKNILGIKTKQLHQFIYVDTPGIYLNNEKDDSFKIIKSSILILFIVDRTVWKTDDEIVLNKIKKNKIPIICVINKIDKILDKSIILPHINFLLKKINPIEIIPISAKKRENIVLLENLIYPY
type: DOMAIN
name: G_ERA_dom
description: Era-type guanine nucleotide-binding (G) domain

phrase: LRDELPSIITVKIESIEEKFKKKLYIRAAIYVKHERQKKIIIGKKAEGIKKISIASRLDIEKKINMKIYLIIWVKVK
type: DOMAIN
name: KH_dom_type_2
description: K Homology domain, type 2

phrase: IAIVGKPNVGKSTLINEIIE
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: YVDTPGIYLNNEKDD
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: YCGYIAIVGKPNVGKSTLINEIIENEISITSKKKNTTQKNILGIKTKQLHQFIYVDTPGIYLNNEKDDSFKIIKSSILILFIVDRTVWKTDDEIVLNKIKKNKIPIICVINKIDKILDKSIILPHINFLLKKINPIEIIPISAKKRENI
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain
Protein sequence:
MSTNKINKKSIARIAAVQALYQNILQNNYDMYDIMQNILACYHSNSIDLPKNFKISLSISHFKMLVKSVFENINKLDEIIDNHLTNDKDPVHMPILLRALLRVSICELLFCSTTPAKVVINEYTDIANDLLNEHEIGFVNSILDKIAQENNKIS

Annotated regions:
phrase: IARIAAVQALYQNILQNNYDMYDIMQNILACYHSNSIDLPKNFKISLSISHFKMLVKSVFENINKLDEIIDNHLTNDKDPVHMPILLRALLRVSICELLFCSTTPAKVVINEYTDIANDLLNEHEIGFVNSILDKI
type: DOMAIN
name: NusB_RsmB_TIM44
description: NusB/RsmB/TIM44
Protein sequence:
MKNSADITVLGAGSYGTALAISLASNGHKTLLWGHDPVHMQTLAQDKCNQAFLPGIAFPDCLQIEADLAKALAASNNVLVVVPSHVFGSVLEQAKPLLRSDARIVWATKGLEPETGRLLQDVARDVLGEQYPLAVLSGPTFAKELAMGLPTAISVAGTCPTFTNDLVELLHSPKRLRVYANDDFTGLQLGGAVKNVIAIGAGMSDGIGFGANARTALITRGLVELTRLGEALGANAATFMGMAGLGDLVLTCTDNQSRNRRFGLALGKGCDVMTAQAEIGQVVEGYRNTKEVFTLAKRLGVEMPITEQIYQVLYQGKSPVDAAKELLSREKKSETPAQ

Annotated regions:
phrase: ITVLGAGSYGTALAISLASNGHKTLLWGHDPVHMQTLAQDKCNQAFLPGIAFPDCLQIEADLAKALAASNNVLVVVPSHVFGSVLEQAKPLLRSDARIVWATKGLEPETGRLLQDVARDVLGEQYPLAVLSGPTFAKELAMGLPTAISVAGT
type: DOMAIN
name: G3P_DH_NAD-dep_N
description: Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal

phrase: DFTGLQLGGAVKNVIAIGAGMSDGIGFGANARTALITRGLVELTRLGEALGANAATFMGMAGLGDLVLTCTDNQSRNRRFGLALGKGCDVMTAQAEIGQVVEGYRNTKEVFTLAKRLGVEMPITEQIYQVLYQGKSPVDA
type: DOMAIN
name: G3P_DH_NAD-dep_C
description: Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal
Protein sequence:
MLLALDAGNSNITIGAFEGSDLVCQWRLRTVHDQTADEWGILLRNLFSPAGLDIRRVDGIIISSVVPPIDSTLAFMTQRYFHTNAMFVGPHTDIGLEIRYDNPNEVGADRLVNGVAGFYKYGGPCVVVDMGTTINFDCISAAGEYLGGSIAVGIGISINALFSKTARLPKVDFRRPKNVIGTNTVASIQSGLYYGAIGMIDGILERVISQLGPETKAIATGGQAHMIVEGSRYLKTYDEHLTLQGLQMIWERNHPEAPQSE

Annotated regions:
Protein sequence:
MSEQSVRLDTVEEAIADIAVGKAVVVVDNEDRENEGDLIFAAEKATPELVAFMVRYSSGYICAPLTPDDCDRLNLPPMMAKNQDVRGTAYTVTVDLATGSTGISAKSRCETILALANPESHPGDFTRPGHVVPLAARPGGVLERDGHTEASIDLARLAGLRPAGVLCEIVSEEDPTDMARSPELRRFADSHGLKMISIEQLIEWRRHHENQVDRVVETRLPTEFGEFTALGFRNILDGQEHVALVAGDLKALDGAEDVLVRVHSECLTGDVFGSHRCDCGPQLHAAQKAVHDAGSGVIVYLRGQEGRGIGLLNKLKAYELQDNGRDTVDANLEQGLPEDAREYSAAGQVLRDLGIKSVNLLTNNPAKGEGLAGFGVEITGRTPLEIEANADNIEYLRTKRDRMGHDLPQVARWDADHAK

Annotated regions:
phrase: RVVETRLPTEFGEFTALGFRNILDGQEHVALVAGDLKALDGAEDVLVRVHSECLTGDVFGSHRCDCGPQLHAAQKAVHDAGSGVIVYLRGQEGRGIGLLNKLKAYELQDNGRDTVDANLEQGLPEDAREYSAAGQVLRDLGIKSVNLLTNNPAKGEGLAGFGVEITGRT
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MGPILERISLPEDIKKLKPSELMALAQELREYIITVASQNGGHLAPSLGVVELTIALHFVFEAPKDKIIWDVGHQAYAHKILTGRKKQFKTLRTFGGLSGFPKRDESPYDAFGVGHSSTSISAALGMALARDLKGEQYEVVAVIGDGALTGGMAFEALNHAGHLQKKLIVVVNDNEMSIAQNVGALSAYLSRIRTDPKYSRGKDELEALIKKIPHIGPTMVKIGERLKDSFKYLLVPGMLFEELGFTYLGPIDGHNIKEMIEVFSRAKTFAGPVVVHVITKKGKGYHWAEENPDGFHGVGKFYISTGEPVEAPRVSFTEVFGKALVELAQDRPEVVAITAAMPTGTGLNYFAQNYPERFYDVGIAEQHAVTMAAGMACEGLKPVVAIYSTFLQRSFDQIIHDVCLQNLPVVFAVDRAGIVGEDGPTHHGIFDLSYLRMIPNLTIMVPRNEDMLRKMLFTALNHSGPVALRYPRGAAVGVELTPYEQLPIGTAEILKEGSDGVVIGVGRPLNYALKAAQKLENEGISLTVIDARFVKPLDYKLLEEVGSLHKPVITVEENVVAGGFGSAVNEYFSFRGIGTKVVNLGIADEFPPHGKVEEILNLYGLTEEKLYLKFREILSKL

Annotated regions:
phrase: REYIITVASQNGGHLAPSL
type: CONSERVED_SITE
name: Transketolase_CS
description: Transketolase conserved site

phrase: VSFTEVFGKALVELAQDRPEVVAITAAMPTGTGLNYFAQNYPERFYDVGIAEQHAVTMAAGMACEGLKPVVAIYSTFLQRSFDQIIHDVCLQNLPVVFAVDRAGIVGEDGPTHHGIFDLSYLRMIPNLTIMVPRNEDMLRKMLFTALNHSGPVALRYPRG
type: DOMAIN
name: Transketolase-like_Pyr-bd
description: Transketolase-like, pyrimidine-binding domain

phrase: GTAEILKEGSDGVVIGVGRPLNYALKAAQKLENEGISLTVIDARFVKPLDYKLLEEVGSLHKPVITVEENVVAGGFGSAVNEYFSFRGIGTKVVNLGIADEFPPHGKVEEILNLYGLTEE
type: DOMAIN
name: Transketolase_C
description: Transketolase, C-terminal domain

phrase: VSFTEVFGKALVELAQDRPEVVAITAAMPTGTGLNYFAQNYPERFYDVGIAEQHAVTMAAGMACEGLKPVVAIYSTFLQRSFDQIIHDVCLQNLPVVFAVDRAGIVGEDGPTHHGIFDLSYLRMIPNLTIMVPRNEDMLRKMLFTALNHSGPVALRYPRGAAVG
type: DOMAIN
name: Transketolase-like_Pyr-bd
description: Transketolase-like, pyrimidine-binding domain

phrase: GEDGPTHHGIFDLSYL
type: BINDING_SITE
name: Transketolase_BS
description: Transketolase binding site
Protein sequence:
MIRFLVLSLLILTLFLTTPAVEGDVSFRLSGATSSSYGVFISNLRKALPNERKLYDIPLLRSSLPGSQRYALIHLTNYADETISVAIDVTNVYIMGYRAGDTSYFFNEASATEAAKYVFKDAMRKVTLPYSGNYERLQTAAGKIRENIPLGLPALDSAITTLFYYNANSAASALMVLIQSTSEAARYKFIEQQIGKRVDKTFLPSLAIISLENSWSALSKQIQIASTNNGQFESPVVLINAQNQRVTITNVDAGVVTSNIALLLNRNNMAAMDDDVPMTQSFGCGSYAI

Annotated regions:
phrase: IQSTSEAARYKFIEQQ
type: CONSERVED_SITE
name: Ribosome_inactivat_prot_CS
description: Ribosome-inactivating protein conserved site
Protein sequence:
MDASAVRKRAAELPAEPGVYQFEAGESVLYVGKAVDLRERVRSYVAPRSDRIRRMVEAAAAVDFAVTDTETQALLLEANLIKRHQPRYNVRLKDDKSYPLVQLTAHEAPRIEITRTPDEAATVFGPYTDKSRVETVVKALRETYELRGCSDHKYEGRDRPCLDYELGLCSAPCTGEIDTDAYAEDVESARRFFDGETGVLAEPLRREMETAAASQAFERAASLRDRLEAVETFHEGGSEAVSGRGGRRLDVLGVAVEGESATVARLRSEDGKLVERDRHRVDAPADAESVPSVLAAFIPQFYAERSLPDVLLLSERYDDEELDQWLHAEGVDIRVPGAGRAATLVELALKNARRTTAEADGPTALARRLGIDRPERIEGFDVSHAGGKDAVGSNVVFVDGSPETADYRRRSLDDENDDYANMRRLVRWRATRAVEGRDDRPTPDLLLIDGGDGQLGAAQDALAETGWDVPAIALAKADELVVTSDGVADWDDGPALRLLQRVRDEAHRFAVQYHQQVRDAVSTPLDSVPGVGPELRERLLKRFGTVDGVRSASREELERVDGVGEDTAAAIDAAL

Annotated regions:
phrase: EELERVDGVGEDTAAAIDA
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: TPLDSVPGVGPELRERLLK
type: DOMAIN
name: Hlx-hairpin-Hlx_DNA-bd_motif
description: Helix-hairpin-helix DNA-binding motif, class 1

phrase: EPLRREMETAAASQAFERAASLRDRLEAV
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: LPAEPGVYQFEAGESVLYVGKAVDLRERVRSYVAPRSDRIRRMVEAAAAVDFAVTDTETQALLLEANLIKRHQPRYN
type: DOMAIN
name: GIY-YIG_UvrC_Cho
description: UvrC/Cho-like, GIY-YIG domain

phrase: GVLAEPLRREMETAAASQAFERAASLRDRLEAVET
type: DOMAIN
name: UVR_dom
description: UVR domain

phrase: VLGVAVEGESATVARLRSEDGKLVERDRHRVDAPADAESVPSVLAAFIPQFYAERSLPDVLLLSERYDDEELDQWLHAEGVDIRVPGAGRAATLVELALKNARRTTAEADGPTALARRLGIDRPERIEGFDVSHAGGKDAVGSNVVFVDGSPETADYRRRSLDDENDDYANMRRLVRWRATRAVEGRDDRPTPDLLLIDGGDGQLGAAQDA
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain

phrase: AEPGVYQFEAGESVLYVGKAVDLRERVRSYVAPRSDRIRRMVEAAAAVDFAVTDTETQALLLEANLIKRHQPRYN
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: EPGVYQFEAGESVLYVGKAVDLRERVRSYVAPRSDRIRRMVEAAAAVDFAVTDTETQALLLEANLIKRHQPRYNVRLK
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: GVYQFEAGESVLYVGKAVDLRERVRSYVAPRSDRIRRMVEAAAAVDFAVTDTETQALLLEANLIKRHQPRY
type: DOMAIN
name: GIY-YIG_endonuc
description: GIY-YIG endonuclease

phrase: RLGIDRPERIEGFDVSHAGGKDAVGSNVVFVDGSPETADYRRRSLDDENDDYANMRRLVRWRATRAVEGRDDRPTPDLLLIDGGDGQLGAAQDALAETGWDVPAIALAKADELVVTSDGVADWDDGPALRLLQRVRDEAHRFA
type: DOMAIN
name: UvrC_RNase_H_dom
description: UvrC, RNAse H endonuclease domain
Protein sequence:
MARKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTTERDGYSAVQLAYGEISPRKVNKPVTGQFAAAGVNPRRHLAELRLADNEDAGALYEVGQELTAEIFADGAYVDVTGTSKGKGFAGTMKRHGFKGQGASHGAQAVHRRPGSIGGCATPGRVFKGTRMSGRMGSDRVTTQNLKVHKVDAENGVLLIKGAIPGRNGGLVVVRSAIKRGEK

Annotated regions:
phrase: FADGAYVDVTGTSKGKGFAGTMK
type: CONSERVED_SITE
name: Ribosomal_uL3_CS
description: Large ribosomal subunit protein uL3, conserved site
Protein sequence:
MKTVNILVEALPYIKKFHRKKIMIKYGGHAMIDEAAMDSTARDTVLLKYVGMEPVVVHGGGPEISRAMNKMGKEPKFIEGLRVTDEETMEIVKMVLVGKINTSIVSKICYHGGRAIGLSGKDSNLLLARKRAPHVVRDDETGERREIDLGLVGEIESVDPGIINMLTDNNYIPVISPIGVDRDANTLNLNADTVAGEVAAGIGAEKLIVLTDVPGILEDPSDPDTLIRRISVDELSDLVKSGIVEGGMLPKTLTCIQAINDGVSSAHIIDGRVEHSLLLEIFTKKGIGTMITE

Annotated regions:
phrase: KKIMIKYGGHAMIDEAAMDSTARDTVLLKYVGMEPVVVHGGGPEISRAMNKMGKEPKFIEGLRVTDEETMEIVKMVLVGKINTSIVSKICYHGGRAIGLSGKDSNLLLARKRAPHVVRDDETGERREIDLGLVGEIESVDPGIINMLTDNNYIPVISPIGVDRDANTLNLNADTVAGEVAAGIGAEKLIVLTDVPGILEDPSDPDTLIRRISVDELSDLVKSGIVEGGMLPKTLTCIQAINDGVSSAHII
type: DOMAIN
name: Asp/Glu/Uridylate_kinase
description: Aspartate/glutamate/uridylate kinase