nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MPLLFILAELAMLFARLDSEGICLHITVPQKIEPRKGGDAEGKVTYVITIDGKPYSLHLRNHSFLSQNFLVYTYNETGSLYSDSSHFLAHCHYRGYVDEVPNSIVTLSICSGLRGFLQLENVSYGIEPLESSARFEHIVYQVKSDSSMLAGNDSHVWQIDQLDKGHFNEQDKNHSQLLPQSLKLHIIVGKFLFDYMGSDIMAITQKIFQIIGLVNAMLTQLKLSVVLASLELWSDKNHISTDGNATDILQRLLDWKRDYLTLQSNEITHLLIYRRRPKYIGAASPGEICSKSYVAGVGMYPEDIGLEGFSVVITQLIGLHIGLTYDDNIRNCSCPSAPCIMQQGALSSSGKKTFSNCSLHDYMHYVSNFDTQCLGDLSNVHVLQPNQAVCGNGIMEAGEECDCGNETECQFKECCDHETCRLKGSAQCGSGACCMPTCELSASGTPCRKAVDPECDFTEYCDGSSSHCVPDTFALNGHLCRLGSAYCYNGRCQALNDQCVSLFGKGSQGASYACFEKVNSPRENLANCDSKDSYSVPCGQQDVLCGKLACFRPPKNYKSPSQSVVYSYVHDSVCLSILPGLSMRSDGRDSAYVADGTVCGPQMYCINGTCKEVNFTGNDCNATKKCKGNGICNNFGNCQCFPDYRPPDCNLQIGSPGGSIDDGNTLRTESAFATKRLSKNEDSWVILGFFIFLPFIVTFLVGIMKRNERKIVPQGEHKI

Annotated regions:
phrase: QAVCGNGIMEAGEECDCGNETECQFKECCDHETCRLKGSAQCGSGACCMPTCELSASGTPCRKAVDPECDFTEYCDGSSSHCVPDTFAL
type: DOMAIN
name: Disintegrin_dom
description: Disintegrin domain

phrase: TGNDCNATKKCKGNGICNNFGNCQCFPDYRPPDC
type: DOMAIN
name: EGF-like_dom
description: EGF-like domain

phrase: QSLKLHIIVGKFLFDYMGSDIMAITQKIFQIIGLVNAMLTQLKLSVVLASLELWSDKNHISTDGNATDILQRLLDWKRDYLTLQSNEITHLLIYRRRPKYIGAASPGEICSKSYVAGVGMYPEDIGLEGFSVVITQLIGLHIGLTYDDNIRNCSCPSAPCIMQQGALSSSGKKTFSNCSLHDYMHYVSNFDTQCLGDL
type: DOMAIN
name: Peptidase_M12B
description: Peptidase M12B, ADAM/reprolysin

phrase: EAGEECDCGNETECQFKECCDHETCRLKGSAQCGSGACCMPTCELSASGTPCRKAVDPECDFTEYCDGSSSHCVPDTF
type: DOMAIN
name: Disintegrin_dom
description: Disintegrin domain

phrase: LNGHLCRLGSAYCYNGRCQALNDQCVSLFGKGSQGASYACFEKVNSPRENLANCDSKDSYSVPCGQQDVLCGKLACFRPPKNYKSPSQSVVYSYVHDSVCLSILPGLSMRSDGRDSAYVADGTVCGPQMYCINGTCKE
type: DOMAIN
name: ADAM_Cys-rich
description: ADAM, cysteine-rich domain

phrase: RLDSEGICLHITVPQKIEPRKGGDAEGKVTYVITIDGKPYSLHLRNHSFLSQNFLVYTYNETGSLYSDSSHFLAHCHYRGY
type: DOMAIN
name: Peptidase_M12B_N
description: Peptidase M12B, propeptide

phrase: LKLHIIVGKFLFDYMGSDIMAITQKIFQIIGLVNAMLTQLKLSVVLASLELWSDKNHISTDGNATDILQRLLDWKRDYLTLQSNEITHLLIYRRRPKYIGAASPGEICSKSYVAGVGMYPEDIGLEGFSVVITQLIGLHIGLTYDDNIRNCSCPSAPCIMQQGALSSSGKKTFSNCSLHDYMHYVSNFDTQCLG
type: DOMAIN
name: Peptidase_M12B
description: Peptidase M12B, ADAM/reprolysin

phrase: LKLHIIVGKFLFDYMGSDIMAITQKIFQIIGLVNAMLTQLKLSVVLASLELWSDKNHISTDGNATDILQRLLDWKRDYLTLQSNEITHLLIYRRRPKYIGAASPGEICSKSYVAGVGMYPEDIGLEGFSVVITQLIGLHIGLTYDDNIRNCSCPSAPCIMQQGALSSSGKKTFSNCSLHDYMHYVSNFDTQC
type: DOMAIN
name: Reprolysin_adamalysin
description: Reprolysin domain, adamalysin-type

phrase: NGHLCRLGSAYCYNGRCQALNDQCVSLFGKGSQGASYACFEKVNSPRENLANCDSKDSYSVPCGQQDVLCGKLACFRPPKNYKSPSQSVVYSYVHDSVCLS
type: DOMAIN
name: ADAM_Cys-rich
description: ADAM, cysteine-rich domain

phrase: EAGEECDCGNETECQFKECCDHETCRLKGSAQCGSGACCMPTCELSASGTPCRKAVDPECDFTEYCDGSSSHCVP
type: DOMAIN
name: Disintegrin_dom
description: Disintegrin domain
Protein sequence:
MKEQEFSYREAKDVSLDSKGLENSFLSSPNREKTPLFFEGNSNETSGYDQTKNFTHGDGDMSLGNLSELNVATDLLESLDLRSMYMHGYGHLDSSFSSQHSPDNRKRMSSTSVFKRINSEEEGRIPSLTYSAGTMNSTSSSTASLKGADIVADYETFNPDQNLAELSFDRSKSSRKRAVEVAEFSRAKTMSPLEYTVQHPYQSHNELSTNPARARAGSVPNLARIPSDVKPVPPAHLSASSTVGPRILPSLPKDTTEDNPALERVETTASLDMDYKPLEPLAPIQEAPVEDTSEPFSSVPEATLDDSDISTESLRKKVLAKMEAKRISSGSSYASTLRKVYDFSELSLPTNGKDYDELYLQSSRNSEPEISTIINDSLQQENMDEDISATSIPKSQAAYGHGSVTYHEVPRYNLTSASVGYSISSQRGRIKSSSTIDNLSAILSSEDLRHPSMQPVPGTKRTYSNYCENEPNKSSQSLVSSESHNVEGWNYSETGTVGFYDPSAEISASIDELRQSTPVARDSELLSRAHSFDLNRLDLPSQDKSTSYEVPNGTENQSPRPVTSLGFVNETFFEEKPKAPLPLGRFYIHLNSILNISISEVHSPIKIIVNTPTQNMQLPWQAVNGNNRLDHDFAFHVDDNFKVSFMFLDIPIEDKSNGSKGVSATKDVSNGKPAETKSKARKFFDKLFNRRKKRKLNKAAAVENSKAKKSVVIKKVSGTATLNLGNVKDSCFGKAFNVEIPIISRGFLEAIPVKINSIGKRTLGNLTL

Annotated regions:
Protein sequence:
MGDEFPFHHLGYVCLNEIYKHLTLKEIFQLSFSSNQIKRSLGIASIPVKSIFVNFDSQYPKIKLIGESSQLEWVFGIPDGLEYTDVGVYKIGHFKFQCKTSGTAFYTEHYDLENAMLVVIRYMISIFKCSNSIITYLSIDLGVIEDSRAICENFVAFKKVERLSIFQTNYGVERNTLNFAQSFDWICDNLEIKNIHIGADVLEPKMVQKTNGEFDIKLCARRFEQVLTMDHIYLQHADWITSEDLLNLDVQTAMLIENNLTEQDLNAFIKQWLRSDSDKLWWLEVKGKMMFNREEVLKDLDVQDDAYRSLNTRWYVARRSRANPSGNGCARKKMGSLRPKLTELWPFKVYIIFGSILIVFGPAALNRMITLRRMDVETDRPSGSETGIFVSKSAVYPFGNKNEVVKVWWNIDKPENCLDWIGLFDNNDSSFYLDQKSLRQHISPVVFTLTSKNLLNASEVYFGLIDGMTGRLLAKSENVEICKSASLVVHEVKKPENINVYLNTNHGRIEIPKKRSFSRKNGSFRSSFEFDFDVEDLHISLVENSEKLNFDHFIASNQLQNNYIQSKSFSHSHVVEIVFSIEPKTSKKSAPDIMEIASSSQTPPESHWKTYLDAKKRKFYVNHVTKETRWTKPDTLNNNHIEPETPVHKRLSDRSASPRNSFITPRRTITVRSAGCPKSDLIQFFQRDEFKTALYENQDAMQIYNECSVVRHAIHRIQKDLDPPSKFENQPLFVRFVNLFADITQPLPSGWECITMNNRTVFLNHANK

Annotated regions:
phrase: QPLPSGWECITMNNRTVFLNHAN
type: DOMAIN
name: WW_dom
description: WW domain

phrase: PPESHWKTYLDAKKRKFYVNHVTKETRWTKPD
type: DOMAIN
name: WW_dom
description: WW domain

phrase: SHWKTYLDAKKRKFYVNHVTKETRWTKP
type: DOMAIN
name: WW_dom
description: WW domain

phrase: WKTYLDAKKRKFYVNHVTKETRWTK
type: DOMAIN
name: WW_dom
description: WW domain

phrase: TPPESHWKTYLDAKKRKFYVNHVTKETRWTKPD
type: DOMAIN
name: WW_dom
description: WW domain

phrase: MDHIYLQHADWITSEDLLNLDVQTAMLIENNLTEQDLNAFIKQWLRSDSDKLWWL
type: DOMAIN
name: F-box-assoc_dom_typ2
description: F-box associated domain, type 2

phrase: SHWKTYLDAKKRKFYVNHVTKETRWTK
type: DOMAIN
name: WW_dom
description: WW domain

phrase: LIQFFQRDEFKTALYENQDAMQIYNECSVVRHAIHRIQKDLDPPSKFENQPLFVRFVNLF
type: DOMAIN
name: HECW1_helix
description: E3 ubiquitin-protein ligase HECW1, helical box domain
Protein sequence:
MEQQEKRGTVRKALLGSVIGFGGLALAGCDVEAPGGPLGTALGFGWPKGITPEATSMYNFWVWVWVTAWIIGFIMWGLFIYGMFSWSAKRAKKAGKDEFPRQTQYNIPLELVLTIVPIIIVMALFFFTVQTQDKVTAMDKDPKVTVDVTGYQWNWKFGYAKVAGELSPTGSDYVGTDEKRQEAAEKTKFDQGGDNPNPINGRSKTDTSYLHFNKIETLGTSEEIPVLVLPSNTPVEFDLASADVSHAFWVPEFLFKRDAYNHPEQNKQQRRFQIEKIEKEGAFVGRCAEMCGTYHAMMNFEIRVVSPEKFAQYLKFRNDNPQATNSDALKSIGEAPYATSTHPFNSERATRDGANFDDTAAA

Annotated regions:
phrase: VSHAFWVPEFLFKRDAYNHPEQNKQQRRFQIEKIEKEGAFVGRCAEMCGTYHAM
type: BINDING_SITE
name: Copper_CuA
description: Copper centre Cu(A)

phrase: DPKVTVDVTGYQWNWKFGYAKVAGELSPTGSDYVGTDEKRQEAAEKTKFDQGGDNPNPINGRSKTDTSYLHFNKIETLGTSEEIPVLVLPSNTPVEFDLASADVSHAFWVPEFLFKRDAYNHPEQNKQQRRFQIEKIEKEGAFVGRCAEMCGTYHAMMNFEIRVVSPEKFAQYLK
type: DOMAIN
name: CcO_II-like_C
description: Cytochrome c oxidase subunit II-like C-terminal

phrase: VLVLPSNTPVEFDLASADVSHAFWVPEFLFKRDAYNHPEQNKQQRRFQIEKIEKEGAFVGRCAEMCGTYHAMMNFEI
type: DOMAIN
name: CcO_II-like_C
description: Cytochrome c oxidase subunit II-like C-terminal
Protein sequence:
MRALGLNIRGITADSRQVRPGSLFLAYPGEHVDGRRYIEAALRQGASAVLWEEADADTGLGKGLPGFAVRDLRAQAGQLADAFYQQPSTQLHMVGVTGTNGKTSCSHWLAQAMSALGHPTAVVGTLGNGFPGALEAAINTTPDPILLHGMLADYLARGAHGVAMEVSSHGLDQGRVNGVHFDVAVLTNLTRDHLDYHGDMAAYAAAKRKLFDWPGLTKRVLNVDDAFGASLYRELRAAGHAVLGYGLQQGEVRGSRLQLSEQGMLLDVDTPYGHAQLQAALLGRFNASNLLAVLATLLVSGVELDAAAEVLGQVQAVPGRMQRYGGGAQPLVVVDYAHTPDALDNVLNTLRIQTTGQLICVFGCGGNRDRGKRSLMAEVASRLADRVVLTSDNPRDEAPDAIIADALPGLQGKEAVIEPERAAAIHAAIAMAVAGDTVLVAGKGHEDYQEIAGVRYPFSDAAVVRLALGERT

Annotated regions:
phrase: GRMQRYGGGAQPLVVVDYAHTPDALDNVLNTLRIQTTGQLICVFGCGGNRDRGKRSLMAEVASRLADRVVLTSDNPRDEAPDAIIADALPGLQGKEAVIEPERAAAIHAAIAMAVAGDTVLVAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: VTGTNGKTSCSHWLAQAMSALGHPTAVVGTLGNGFPGALEAAINTTPDPILLHGMLADYLARGAHGVAMEVSSHGLDQGRVNGVHFDVAVLTNLTRDHLDYHGDMAAYAAAKRKLFDWPGLTKRVLNVDDAFGASLYRELRAAGHAVLGYGLQQGEVRGSRLQLSEQGMLLDVDTPYGHAQLQAALLGRFNASNLLAVLA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: IRGITADSRQVRPGSLFLAYPGEHVDGRRYIEAALRQGASAVLWEEADADTGLGKGLPGFAVRDLRAQAGQLADAF
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain
Protein sequence:
MGLRVAVVGATGNVGREMLEILSERLFPADEVIALASRRSMGSEVSFGDKTLKVKDLEQFDFSGVDLVLMSAGGDVSREWSPKIGATGAVVIDNSSAWRMDPRVPLVVPEVNPEAVHGYEKLNIIANPNCSTAQLVVALKPLHDRAKVKRVVVATYQSVSGAGRDAMDELWNQTKKLYVGDEIVKEQFTKQIAFNVIPHIDVFMEDGYTKEEWKMMAETKKILDPSIKLTATCVRVPVFVGHSEAVNIEFEQPITAEEAQEILREAPGVMLVDRREDEGYTTPIECVGEFATFVSRVREDATVENGISLWCVSDNLRKGAALNAVQIAELMLNKGLFKRVRAA

Annotated regions:
phrase: LKPLHDRAKVKRVVVATYQSVSGAGRDAMDELWNQTKKLYVGDEIVKEQFTKQIAFNVIPHIDVFMEDGYTKEEWKMMAETKKILDPSIKLTATCVRVPVFVGHSEAVNIEFEQPITAEEAQEILREAPGVMLVDRREDEGYTTPIECVGEFATFVSRVREDATVENGISLWCVSDNLR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain

phrase: RVAVVGATGNVGREMLEILSERLFPADEVIALASRRSMGSEVSFGDKTLKVKDLEQFDFSGVDLVLMSAGGDVSREWSPKIGATGAVVIDNSSAWRMDPRVPLVVPEVNPEAV
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: RVAVVGATGNVGREMLEILSERLFPADEVIALASRRSMGSEVSFGDKTLKVKDLEQFDFSGVDLVLMSAGGDVSREWSPKIGATGAVVIDNSSAWRMDPRVPLVVPEVNPEAVHG
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding
Protein sequence:
MICVSIGRGRHRMMRAEHQHLVEQGAKLVELRVDYINREVSLKRLLDHRPCPVIITCRRESDHGKWSGTEANRQMLLRAAIVEGVDYIDLEDDIAGKIPRYGKTKRIVSLHNFRETPKDLEAIHDRLCQLDPDVVKIATMAHSPADNLRMLNLVQDAKIPTVGICMGEIGMPSRILSARFGAPWTYATFHHERTMAPGQFSYSQMTEIYRYEQINAQTEVYGVIADPVGHSMSPLIHNAAFGHFQMNKVYIPFRVPREDLDSFVISCSRLGIKALSVTIPHKEAIIGHCTQVEDAVEGIGAANTVVFEKGGAAAYNTDYTAAMHSMLEAMGLSAVPNALAGKKAVILGAGGVSRALVYGLTKFGAEVTIASRTHARSEELARRFRAKTVAWDDRCKGQYDLLINGTPIGMHPNVDDTPFDKRALKASQTVFDTVYNPERTLLVKEAREVGCRVVTGLDMFIRQAALQFHHFTGQEAPAELMKESLRRAIGPAKPVTGASS

Annotated regions:
phrase: VIADPVGHSMSPLIHNAAFGHFQMNKVYIPFRVPREDLDSFVISCSRLGIKALSVTIPHKEAIIGHCTQVEDAVEGIGAANT
type: DOMAIN
name: Shikimate_DH-bd_N
description: Shikimate dehydrogenase substrate binding, N-terminal

phrase: ALAGKKAVILGAGGVSRALVYGLTKFGAEVTIASRTHARSEELARRFRAK
type: DOMAIN
name: Shikm_DH/Glu-tRNA_Rdtase
description: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase

phrase: GLDMFIRQAALQFHHFTGQEAPAELMKESL
type: DOMAIN
name: SDH_C
description: SDH, C-terminal
Protein sequence:
MTYESFAYWYDKLMNEAPYDAWQSFVQKKLKQYGRQGAKRILDVGCGTGELAVRLAKEGFLVTGVDLSENMLAIAQAKAEAQQVTIEFFQQNMTELEGFSSFDCVTIFCDSLNYLLEESEVRQTFSRIYELLKEDGLLLFDVHSTYKMDHIFQDAIFTSNDEEISYIWSCYPLSLPHSVEHELTFFVRGDDGKYERHDELHRQCTYEIDQYKQWLTEAGFTVLEITADFTDEAPSETSERVFFVAKK

Annotated regions:
phrase: ILDVGCGTGELAVRLAKEGFLVTGVDLSENMLAIAQAKAEAQQVTIEFFQQNMTELEGFSSFDCVTIFCDSLNYLLEESEVRQTFSRIYELLKED
type: DOMAIN
name: Methyltransf_25
description: Methyltransferase domain 25
Protein sequence:
MNIHEYQAKRLLHEYGAPIANGVAVYSIEQAEKWAKKLPGPLYVVKSQIHAGGRGKGQFKELGPDAKGGVRLAQSVEEVVANVQEMLGKTLVTKQTGPEGKQVNRLYIEDGADIERELYLSLLVDRSVGRIAFVVSTEGGMDIETVAEETPEKIFTLPIDVTEGVTSADCARLCDALELHDSAREDGEKLFPILYKAFCEKDMSLLEINPLIVMKDGHLRVLDAKVSFDNNALFRHPDILELRDLSEEDPKEIEASKHDLAYVALEGTIGCMVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVTAAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVAAVREVGLKVPLVVRLEGTNVEQGKAIINDSGLNVIPADDLDDAAQKIVAAVKGA

Annotated regions:
phrase: MVNGAGLAMATMDIIKLYGAEPANFLDVGGGASKEKVTAAFKIITADPNVKGILVNIFGGIMRCDVIAEGVVAAVREVGLKVPLVVRLEGTNVEQGKAIINDSGLNVIPADDLDDAAQKI
type: DOMAIN
name: SUCC_ACL_C
description: ATP-citrate synthase/succinyl-CoA ligase, C-terminal domain

phrase: NIHEYQAKRLLHEYGAPIANGVAVYSIEQAEKWAKKLPGPLYVVKSQIHAGGRGKGQFKELGPDAKGGVRLAQSVEEVVANVQEMLGKTLVTKQTGPEGKQVNRLYIEDGADIERELYLSLLVDRSVGRIAFVVSTEGGMDIETVAEETPEKIFTLPIDVTEGVTSADCARLCDALELHDSAREDGEKLFPILYKAFCEKDMSLLEINPL
type: DOMAIN
name: ATP-grasp_succ-CoA_synth-type
description: ATP-grasp fold, succinyl-CoA synthetase-type

phrase: GTIGCMVNGAGLAMATMDIIKLYG
type: CONSERVED_SITE
name: Succ-CoA_synthase_bsu_CS
description: Succinyl-CoA synthetase, beta subunit, conserved site

phrase: KRLLHEYGAPIANGVAVYSIEQAEKWAKKLPGPLYVVKSQIHAGGR
type: DOMAIN
name: ATP-grasp
description: ATP-grasp fold
Protein sequence:
MRVKEMRKHCQHLWGWGTLLLGMLMMICSAAEETWVTVYYGVPVWKEATTTLFCASDAKAYVQEAHNVWATHACVPTDPNPQEVRLVNVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTDDLSNASNSATKNNSWAMETGEMKNCSFNVTTEIRDKVKKEYALFYKLDVIPIKGDNTSNTSYRLINCNTSTLTQACPKISFEPIPIHFCTPAGFAIIKCNDKDFKGTGPCKNVSTVQCTHGIRPVVSTQLLLNGSLAEKEVVIRSENFTDNAKTIIVQLNKTVQIHCTRPNNNTRKGIHIGPGRALFYATDIIGDIRQAHCNLSRADWNETLRQVVTKLGEQFGNNKTIKFQPSSGGDPEIVTHSFNCGGEFFYCNSTPLFNSAWNFTSTWNIIEGSDNTENITLQCRIKQIINMWQEVGKAMYAPPIQGQINCTSNITGLLLTRDGGKDENKTEETFRPGGGDMRDNWRSELYKYKVVKIEPLGIAPTKARRRVVQREKRAVGAIGAMFLGFLGAAGSTMGAASITLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLGDQQLLGIWGCSGKLICTTNVPWNSSWSNKSLDKIWHNMTWMQWDREINNYTSLIYNLLEESQNQQEKNEQELLELDKWSNLWNWFNITKWLWYIKIFIMIVGGLIGLRIVFAVLSIVNRVRQGYSPLSFQTHLPAPRGPDRPEGIGEEGGERGRDTSTRLVHGFLALVWDDLRSLC

Annotated regions:
phrase: WVTVYYGVPVWKEATTTLFCASDAKAYVQEAHNVWATHACVPTDPNPQEVRLVNVTENFNMWKNNMVEQMHEDIISLWDQSLKPCVKLTPLCVTLNCTDDLSNASNSATKNNSWAMETGEMKNCSFNVTTEIRDKVKKEYALFYKLDVIPIKGDNTSNTSYRLINCNTSTLTQACPKISFEPIPIHFCTPAGFAIIKCNDKDFKGTGPCKNVSTVQCTHGIRPVVSTQLLLNGSLAEKEVVIRSENFTDNAKTIIVQLNKTVQIHCTRPNNNTRKGIHIGPGRALFYATDIIGDIRQAHCNLSRADWNETLRQVVTKLGEQFGNNKTIKFQPSSGGDPEIVTHSFNCGGEFFYCNSTPLFNSAWNFTSTWNIIEGSDNTENITLQCRIKQIINMWQEVGKAMYAPPIQGQINCTSNITGLLLTRDGGKDENKTEETFRPGGGDMRDNWRSELYKYKVVKIEPLGIAPTKARRRVVQREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: MGAASITLTVQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLGDQQLLGIWGCSGKLICTTNVPWNSSWSNKSLDKIWHNMTWMQWDREINNYTSLIYNLLEESQNQQEKNEQELLELDKWSNLWNWFNITKWLWYIKIFIMIVGGLIGLRIVFAVLSIVNRVRQGYSPLSFQ
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: VQARQLLSGIVQQQNNLLRAIEAQQHLLQLTVWGIKQLQARVLAVERYLGDQQLLGIWGCSGKLICTTNVPWNSSWSNKSLDKIWHNMTWMQWDREINNYTSLIYNLLEESQNQQEKNEQELLELD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MDCRGTRHRLLRLRERGGSVSRNTNSVLDHTSEELRQAFAREGLERFRADQVLRWVYGQRVRDFRLMSDLARPLRERLYETWSLGCLERESSFESTDGTRKLVLRTHDGAKIESVLIPEPRRQTLCVSSQVGCSLDCSFCATGRLGLGRNLRAGEIVDQVLHGAEVLARSGKEITHVVFMGMGEPLLNLDNVIRSIRILADPRGMGLSPRRVTVSTAGVVPRMAELGRALPVRLTVSLHATTDEVRNELVPLNRRFPIATLLEACRRYPASRRDRLSFEYTLIRGVNDSPDDARRLVKLLHGLRAKVNLIPMNEHPGSAYRRPEAPQIEAFAGTLAAARLPVTVRRSRGDDIFAACGQLGAPAPSHEGQTRLILSDKQKGNALRHR

Annotated regions:
phrase: EPRRQTLCVSSQVGCSLDCSFCATGRLGLGRNLRAGEIVDQVLHGAEVLARSGKEITHVVFMGMGEPLLNLDNVIRSIRILADPRGMGLSPRRVTVSTAGVVPRMAELGRALPVRLTVSLHATTDEVRNELVPLNRRFPIATLLEACRRYPASRRDRLSFEYTLIRGVNDSPDDARRLVKLLHGLRAKVNLIPMNEHPGSAYRRPEAPQIEAFAGTLAAARLPVTVRRSRGD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: QTLCVSSQVGCSLDCSFCATGRLGLGRNLRAGEIVDQVLHGAEVLARSGKEITHVVFMGMGEPLLNLDNVIRSIRILADPRGMGLSPRRVTVSTAGVVPRMAELGRALPVRLTVSLHATTDEVRNELVPLNRRFPIATLLEACRRYPASRRDRLSFEYTLIRGVNDSPDDARRLVKLLHGLRAKVNLIPMNEHPGSAYRRPEAPQIEAFAGTLAAARLP
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: RNTNSVLDHTSEELRQAFAREGLERFRADQVLRWVYGQRVRDFRLMSDLARPLRERLYETWSLGCLERESSFESTDGTRKLVLRTHDGAKIESVLIPEPRRQTLCVSSQVGCSLDCSFCATGRLGLGRNLRAGEIVDQVLHGAEVLARSGKEITHVVFMGMGEPLLNLDNVIRSIRILADPRGMGLSPRRVTVSTAGVVPRMAELGRALPVRLTVSLHATTDEVRNELVPLNRRFPIATLLEACRRYPASRRDRLSFEYTLIRGVNDSPDDARRLVKLLHGLRAKVNLIPMNEHPGSAYRRPEAPQIEAFAGTLAAARLPVTVRRSRGDDIFAACGQLGAP
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SSQVGCSLDCSFCATGRLGLGRNLRAGEIVDQVLHGAEVLARSGKEITHVVFMGMGEPLLNLDNVIRSIRILADPRGMGLSPRRVTVSTAGVVPRMAELGRALPVRLTVSLHATTDEVRNELVPLNRRFPIATLLEACRRYPASRRDRLSFEYTLIRGVNDSPDD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VLDHTSEELRQAFAREGLERFRADQVLRWVYGQRVRDFRLMSDLARPLRERLYE
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MPVALCTMSHSPLMGRNDPAQTVIDDVDAAFENARTFIADFAPDLIVIFAPDHYNGVYYDLMPPFCIGAAAQSVGDYGTESGPLNVDRDAAYTVAREVLASGVDVAFSERMHVDHGFAQALQLLVGSITAVPTVPIFINSVAEPLGPVSRVRLLGEAVGRAAANLDKRVLFVGSGGLSHDPPVPQFATAPTEVKEKLIDGRNPTEAERNAREQRVIDAGRDFAAGVATIAPLNPEWDRNLLDVLTSGEIEQIDSWTNEWFVEQAGHSSHEVRTWIAAYAAMSAAGKYRVTSTFYREIPEWIAGFGISTAVAVDE

Annotated regions:
phrase: CTMSHSPLMGRNDPAQTVIDDVDAAFENARTFIADFAPDLIVIFAPDHYNGVYYDLMPPFCIGAAAQSVGDYGTESGPLNVDRDAAYTVAREVLASGVDVAFSERMHVDHGFAQALQLLVGSITAVPTVPIFINSVAEPLGPVSRVRLLGEAVGRAAANLDKRVLFVGSGGLSHDPPVPQFATAPTEVKEKLIDGRNPTEAERNAREQRVIDAGRDFAAGVATIAPLNPEWDRNLLDVLTSGEIEQIDSWTNEWFVEQAGHSSHEVRTWIAAYAAMSAAGKYRVTSTFYREIPEWIAGF
type: DOMAIN
name: Xdiol_dOase_suB
description: Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B
Protein sequence:
MLISKHEERVKSILSARMENGNLRSRENTQVEFKQSFNKGNIAIYAKTMAAFSNNSGGYIIFGIKDSPRSIIGLQNSNFENIQQEDLTDSINNLFSPSINWELGSFILKEKEINSNGDVIIVQKIIGWIYTEESNIKPVIAQKNNSSEKIVNGDIFYRYRARTEKIKYAEMEQIINCRMKQERDSLFKVFEFIRNNGATNLGIVDYNNGKLSTPYGVDVVLEKNLIAKLLKKAKFIKEGSFSENEGIPVIKVTGNINLAEEVPVPLENLDETYPYIQKQLAEKLNITPQKLYALIWYFKMKESKKYHLEITTSKTNKTHKFSKFALLFLKEKIIELDENKNELNNIISKFNNRKK

Annotated regions:
phrase: ENTQVEFKQSFNKGNIAIYAKTMAAFSNNSGGYIIFGIKDSPRSIIGLQNSNFENIQQEDLTDSINNLFSPSINWELGSFILKEKEINSNGDVIIVQKIIGWIYTEESNIKPVIAQKNNSSEKIVNGDIFYRYRARTEK
type: DOMAIN
name: Schlafen_AlbA_2_dom
description: Schlafen, AlbA_2 domain
Protein sequence:
MATAPARRASSSRSSSEISRTTPSMGFQLGFVDDSNVFEWQVTIIGPPETLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPDGRVCISIHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANIEAAKDWREKQDEFKKKVRRAVRKSQEML

Annotated regions:
phrase: ARRASSSRSSSEISRTTPSMGFQLGFVDDSNVFEWQVTIIGPPETLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPDGRVCISIHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANIEAAKDWREKQDEFKKKVRRAVRKSQ
type: DOMAIN
name: UBQ-conjugat_E2_core
description: Ubiquitin-conjugating enzyme E2, catalytic core domain

phrase: EISRTTPSMGFQLGFVDDSNVFEWQVTIIGPPETLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPDGRVCISIHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANIEAAKDWREKQDEFKKKVRR
type: DOMAIN
name: UBQ-conjugat_E2_core
description: Ubiquitin-conjugating enzyme E2, catalytic core domain

phrase: WHPNVYPDGRVCIS
type: ACTIVE_SITE
name: UBQ-conjugating_AS
description: Ubiquitin-conjugating enzyme, active site
Protein sequence:
MGTQKVTVSLIFALSIATIGSFQFGYNTGVINAPETIIKDFLNYTLEEKSENLPTEVLLTSLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMVNLLAVAGGCLMGFCKIAQSVEMLILGRLIIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVIGILVAQIFGLKVIMGTEELWPLLLGFTIIPAVLQSAALPFCPESPRFLLINRKEEENAKEILQRLWGTQDVSQDIQEMKDESARMAQEKQVTVLELFRSRSYRQPIIISIMLQLSQQLSGINAVFYYSTGIFKDAGVEEPIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAVCSILMTISLLLKDNYNWMSFVCIGAILVFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGLLFPSAAFYLGAYVFIIFTGFLIVFLVFTFFKVPETRGRTFEEITRAFEGQGQDANRAEKGPIVEMNSMQPVKETATV

Annotated regions:
phrase: IIGLFCGLCTGFVPMYIGEISPTAL
type: CONSERVED_SITE
name: Sugar_transporter_CS
description: Sugar transporter, conserved site

phrase: SLFLVERAGRRTLHMI
type: CONSERVED_SITE
name: Sugar_transporter_CS
description: Sugar transporter, conserved site

phrase: ALSIATIGSFQFGYNTGVINAPETIIKDFLNYTLEEKSENLPTEVLLTSLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMVNLLAVAGGCLMGFCKIAQSVEMLILGRLIIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVIGILVAQIFGLKVIMGTEELWPLLLGFTIIPAVLQSAALPFCPESPRFLLINRKEEENAKEILQRLWGTQDVSQDIQEMKDESARMAQEKQVTVLELFRSRSYRQPIIISIMLQLSQQLSGINAVFYYSTGIFKDAGVEEPIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAVCSILMTISLLLKDNYNWMSFVCIGAILVFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGLLFPSAAFYLGAYVFIIFTGFLIVFLVFTFFKVPET
type: DOMAIN
name: MFS_dom
description: Major facilitator superfamily domain
Protein sequence:
MKPQDLKVPFFWEERSTKIKDNVLYVPEHYFKHHQFIMPSWEEFFGNDNPISCELCSGNGDWVVAQAKETPEVNWIAVEKRFDRVRKIWSKMHNCRVTNLRIVCGDAQTFFLHYLGEAVVQRIIVNFPDPWPKSRHRKHRLFQDEFLNNVVRVLTEPGILILATDDKNYLLQAIQIMRQYLSPTMEDPYYCEVENYGNSWFETLWRSKGREIFYTEFVKKLGYS

Annotated regions:
Protein sequence:
MKAIELIKPLKTTEISMEISNDLEINKVTQDTREVESGSLFICITGALQNGHDLAKEAVQKGAVLVVASEPIEVTVPVIYVNNTMKAMAILAAAFYQYPSQNLRVIGVTGTNGKTTVTHLLDYIFHDHKEKTGVIGTMYRRIGSEVYETKNTTPDSITLQKTLYEMQKSGVNTCSMEVSSHSLVQGRAWGTDFDIAIFTNLSQDHLEYHHTMEKYAEAKSLLFSQLGNGYQQGKAKFAILNFDDPVGKSFEEKTAARVFSYGIDQPADFKATDLSITNKGTRFNLNFENRVYEVQLQLVGKFNVSNALAAIAGAYAAGLEVSSVIQSIGEISGVRGRFELVKGDQDFAVIVDYAHTPDGLLNVLNAVNEIKTGNVFCVVGCGGDRDRTKRPIMAEIAQKNSDTVIFTADNPRTEDPIAILDEMVEGLKEETYQLIPDRREAIQAAIKQAKTNDIVLIAGKGHENYQIIGTKKIHFDDVEEAKRAIEIKNNDN

Annotated regions:
phrase: VTGTNGKTTVTHLLDYIFHDHKEKTGVIGTMYRRIGSEVYETKNTTPDSITLQKTLYEMQKSGVNTCSMEVSSHSLVQGRAWGTDFDIAIFTNLSQDHLEYHHTMEKYAEAKSLLFSQLGNGYQQGKAKFAILNFDDPVGKSFEEKTAARVFSYGIDQPADFKATDLSITNKGTRFNLNFENRVYEVQLQLVGKFNVSNALAAI
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRFELVKGDQDFAVIVDYAHTPDGLLNVLNAVNEIKTGNVFCVVGCGGDRDRTKRPIMAEIAQKNSDTVIFTADNPRTEDPIAILDEMVEGLKEETYQLIPDRREAIQAAIKQAKTNDIVLIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: INKVTQDTREVESGSLFICITGALQNGHDLAKEAVQKGAVLVVASEPIEVTVPVIYVNNTMKAMAILAAAF
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: DIAIFTNLSQDHLEYHHTMEKYAEAKSLLFSQLGNGYQQGKAKFAILNFDDPVGKSFEEKTAARVFSYGIDQPADFKATDLSITNKGTRFNLNFENRVYEVQLQLVGKFNVSNALAAIAGAYAAGLEVSSVIQSIGEISGVRGRFELVKGDQDFAVIVDYAHTPDGLLNVLNAVNEIKTGNVFCVVGCGGDRDRTKRPIMAEIAQKNSDTVIFTADNPRTEDPIAILDEMVEG
type: DOMAIN
name: VWF_A
description: von Willebrand factor, type A
Protein sequence:
MASESGKLWGGRFAGSVDPTMDKFNSSIAYDRHLWNVDLQGSKAYSRGLEKAGLLTKAEMQQILQGLDKVAEEWAQGIFKLYPNDEDIHTANERRLKELIGEAAGKLHTGRSRNDQVVTDLRLWMRQTYSKLSTFLKVLIEAMVDRAEAECEVLFPGYTHLQRAQPIRWSHWILSHAVALTRDLERLKEVQKRINVLPLGSGAIAGNPLGVDREFLCAELNFGAITLNSMDATSERDFVAEFLFWASLCMTHLSRMAEDLILYGTKEFNFVQLSDAYSTGSSLMPQKKNPDSLELIRSKARRVFGRCAGLLMTLKGLPSTYNKDLQEDKEAVFEVSDTMTAVLQVATGVISTLQIHRENMAQALSPDMLATDLAYYLVRKGMPFRQAHEASGKAVVVAEMKGVALNQLSLQELQTVSPLFSSDVNLVWDYSHSVEQYTALGGTAQSSVEWQISQVRALLQM

Annotated regions:
phrase: MLATDLAYYLVRKGMPFRQAHEASGKAVVVAEMKGVALNQLSLQELQTVSPLFSSDVNLVWDYSHSV
type: DOMAIN
name: Arg_succ_lyase_C
description: Argininosuccinate lyase, C-terminal

phrase: GSSLMPQKK
type: CONSERVED_SITE
name: Fumarate_lyase_CS
description: Fumarate lyase, conserved site

phrase: GRFAGSVDPTMDKFNSSIAYDRHLWNVDLQGSKAYSRGLEKAGLLTKAEMQQILQGLDKVAEEWAQGIFKLYPNDEDIHTANERRLKELIGEAAGKLHTGRSRNDQVVTDLRLWMRQTYSKLSTFLKVLIEAMVDRAEAECEVLFPGYTHLQRAQPIRWSHWILSHAVALTRDLERLKEVQKRINVLPLGSGAIAGNPLGVDREFLCAELNFGAITLNSMDATSERDFVAEFLFWASLCMTHLSRMAEDLILYGTKEFNFVQLSDAYSTGSSLMPQKKNPDSLELIRSKARRVF
type: DOMAIN
name: Fumarate_lyase_N
description: Fumarate lyase, N-terminal
Protein sequence:
MADGVDHIDIYADVEEEFNQESDYPVHDQIDLYDDVISPSANNGDAPEDRDYLDSLPAPGGNEGSKGAPANVVYTYNGKRIALYIGNLTWWTTDEDLTDAIRSIGINDVLEIKFFENRANGQSKGFALVCVGSDSSSRKLMDLLSKRELHGQNPIVTPCNKQSLSQFEMQSRKSTQSGQMSGEGKAGPPGSGSRGGGFPPGKGQRRFPGPPGQGDRFPGPVGPGGPPPHFPGMQGPPRLPSGPPGPLGPPGPPPPGQGLPPPLGGPPNRGDRPPPPVLFPGQFGQPPMGPMPPGPPPPGYGPPPGPPPPQQGPPPPGPFPPRPPGPLGPPLGLAPPPHMQGPPPGGPPPAPHVNPAFFPPPGNNMPSSDGRGPPPGDPYGRPPPYDRDFPGGRDMDASRTPLSEAEFEEIMNRNRAISSSAISRAVSDASAADYGSAIETLVTAISLIKQSKVSADDRCKVLISSLQDCLHGIESKSYGSVAGRRERSRERDHSRSREKSRRHKSRSRDRHEDYYRERSRERDRHRERDRDRERDREREREYRHR

Annotated regions:
phrase: LYIGNLTWWTTDEDLTDAIRSIGINDVLEIKFFENRANGQSKGFALVCVGSDSSSRKLMDLLSKRELHG
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: ALYIGNLTWWTTDEDLTDAIRSIGINDVLEIKFFENRANGQSKGFALVCVGSDSSSRKLMDLLSKRELHGQNPIVT
type: DOMAIN
name: CPSF6_RRM
description: Cleavage and polyadenylation specificity factor subunit 6, RNA recognition motif

phrase: ALYIGNLTWWTTDEDLTDAIRSIGINDVLEIKFFENRANGQSKGFALVCVGSDSSSRKLMDLLSKRELHGQNPIV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: IALYIGNLTWWTTDEDLTDAIRSIGINDVLEIKFFENRANGQSKGFALVCVGSDSSSRKLMDLLSKRELHGQNPIVTPCN
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain
Protein sequence:
MRKLFLSLLMIPFVAKANFMIYPISKEIKGGSSELIRIYSKSKDTQYIKVYTKKVLNPGTKEEYEVDTPNWEGGLVTTPSKVILPGGGSKSVRLSQLKDISSEDVYRVYFESIKPEKQDGLSKNKSLKTDLSVNIIYAALIRVLPKDGKSDMRASLSPKSSLLIKNTGNVRVGIKDAFFCKKTSINNDDCIKKTYNKNIYPGSSFDTGVIQNGFSHIFIDSVDGSAGKQGKRMLISIH

Annotated regions:
Protein sequence:
MKFENTLACALQLDKEDKLNHLRNSFLFPQHNGKDCIYFTGNSLGLQPKNTSGEIKQVLDSWAVLGVEGHFKGENPWMHFHDKLTKPLAKIVGCLAEEIVIMNALTVNLHLMMAGFYRPTKQRYKIICEAKAFPSDQYAFASQALLHNLKPEDVIVEVKPREGKHVLHTEDIISVIEQHAGETALVLFSGINYYSGQYFNIKTITEAAHKAGAYAGFDLAHAAGNVELNLHDWNVDFACWCTYKYLNSGPGAVSGTFIHERFARDKNFPRLAGWWGNNKLTRFKMEQNFDAIPTAEGWQLSTPPALLLAAHKAALDIFEEAGIENLHQKRKTLTAYLHFILNGINQKYNYRVIEIITLANEDERGCQVSMFMHKNGKAIFDALTNEGVIADWREPNVIRVAPVPLYNKYEDVWRFGNIIENILQ

Annotated regions: