nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MKKQNNLRSLAAQAVEQVVEQGQSLSNVLPPLQQKVADKDKALLQELCFGVLRTLSQLEWLINKLMSRPMTGKQRTVHYLIMVGFYQLLYTRVPPHAALAETVEGAVSIKRPQLKGLINGVLRQFQRQQETLLNEFATSDARFLHPGWLVKRLQNAYPTQWQRIIEANNQRPPMWLRVNRTHHTRDGWLGLLEDAGMKGYPHPDYPDAVRLETPAPVHALPGFAEGWVTVQDASAQGCAVFLAPQNGEHILDLCAAPGGKTTHILEVAPEADVLAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPAQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIAELAQLQAEILDAVWPRLNPGGTLVYATCSVLPEENRDQIKAFLQRTPDAALSETGTPDQPGQQNLPGGEEGDGFFYAKLIKK

Annotated regions:
phrase: FDRILLDAPCS
type: CONSERVED_SITE
name: RsmB/NOL1/NOP2-like_CS
description: RsmB/NOL1/NOP2-like, conserved site

phrase: VFLAPQNGEHILDLCAAPGGKTTHILEVAPEADVLAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPAQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIAELAQLQAEILDAVWPRLNPGGTLVYATCSVLPEENRDQIKAFLQRTPDAALSETGTPDQPGQQNLPGGEEGDGFFYAK
type: DOMAIN
name: MeTrfase_RsmB-F_NOP2_cat
description: SAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic core

phrase: NLRSLAAQAVEQVVEQGQSLSNVLPPLQQKVADKDKALLQELCFGVLRTLSQLEWLINKLMSRPMTGKQRTVHYLIMVGFYQLLYTRVPPHAALAETVEGAVSIKRPQLKGLINGVLRQFQ
type: DOMAIN
name: NusB_RsmB_TIM44
description: NusB/RsmB/TIM44

phrase: HPGWLVKRLQNAYPTQWQRIIEANNQRPPMWLRVNRTHHTRDGWLGLLEDAGMKGYPHPDYPDAVRLETPAPV
type: DOMAIN
name: RsmB-like_ferredoxin
description: Ribosomal RNA small subunit methyltransferase B-like, ferredoxin-like domain

phrase: IIEANNQRPPMWLRVNRTHHTRDGWLGLLEDAGMKGYPHPDYPDAVRLETPAPVHALPGFAEGWVTVQDASAQGCAVFLAPQNGEHILDLCAAPGGKTTHILEVAPEADVLAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPAQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIAELAQLQAEILDAVWPRLNPGGTLVYATCSVLPEENRDQIKAFLQRTPDAALSETGTPDQPGQQNLPGGEEGDGFFYAKLIK
type: DOMAIN
name: MeTrfase_RsmB-F_NOP2_dom
description: SAM-dependent methyltransferase RsmB-F/NOP2-type domain

phrase: NNLRSLAAQAVEQVVEQGQSLSNVLPPLQQKVADKDKALLQELCFGVLRTLSQLEWLINKLMSRPMTGKQRTVHYLIMVGFYQLLYTRVPPHAALAETVEGAVSIKRPQLKGLINGVLRQFQRQ
type: DOMAIN
name: RsmB-like_N
description: Ribosomal RNA small subunit methyltransferase B-like, N-terminal domain
Protein sequence:
MGVLSRVDTPEDVRRLNVAELRELAEEIREFLVRKVAATGGHLGPNLGVVELTIALHRVFDSPADPLIFDTGHQAYVHKILTGRKDRFDDLRKQGGLSGYPSRAESPHDWVESSHASAALSYADGLAKAFALGGQDRHVVAVVGDGALTGGMCWEALNNIAAAPDRPVVVVVNDNGRSYAPTIGGLADRLTALRTQPAYEHALDAGKRLLKSIPRVGESAYSMVHAVKAGIKDAVSPQELFSDLGLKYVGPVDGHDVVAMESALRRAKDFGGPVVVHAVTQKGRGYEHAENHVADQMHACDPIDPLTGRPLGGAKARGWTSVFSEELIEHARRRSDIVAITAAMPGPTGLSAFGERFPDRMFDVGIAEQHAMASAAGLALGGMHPVVAIYSTFLNRAFDQLLMDVALLKQPVTVVLDRAGITGPDGASHNGMWDLSLLGIIPGIRVAAPRDAATLREELGEALAVTDGPTVLRFPKGSVAEDLTAVERIDGVDVLRAADPESAVRTQRGDVLIVAVGPFARIGLAAAELLAPEGVSVTVVDPRWVLPVSDTVVKLAENYRLVVTLEDSGLHGGIGSTVSARLRSVGLDVPTRDLGVPQQFLDHASRDQVLEQLGLTPTDVARRIAGWLDAR

Annotated regions:
phrase: RGWTSVFSEELIEHARRRSDIVAITAAMPGPTGLSAFGERFPDRMFDVGIAEQHAMASAAGLALGGMHPVVAIYSTFLNRAFDQLLMDVALLKQPVTVVLDRAGITGPDGASHNGMWDLSLLGIIPGIRVAAPRDAATLREELGEALAVTDGPTVLRFPKGSVA
type: DOMAIN
name: Transketolase-like_Pyr-bd
description: Transketolase-like, pyrimidine-binding domain

phrase: GPDGASHNGMWDLSLL
type: BINDING_SITE
name: Transketolase_BS
description: Transketolase binding site

phrase: VRTQRGDVLIVAVGPFARIGLAAAELLAPEGVSVTVVDPRWVLPVSDTVVKLAENYRLVVTLEDSGLHGGIGSTVSARLRSVGLDVPTRDLGVPQQFLDHASRDQVLEQLGLTPTD
type: DOMAIN
name: Transketolase_C
description: Transketolase, C-terminal domain

phrase: GWTSVFSEELIEHARRRSDIVAITAAMPGPTGLSAFGERFPDRMFDVGIAEQHAMASAAGLALGGMHPVVAIYSTFLNRAFDQLLMDVALLKQPVTVVLDRAGITGPDGASHNGMWDLSLLGIIPGIRVAAPRDAATLREELGEALAVTDGPTVLRFPKGS
type: DOMAIN
name: Transketolase-like_Pyr-bd
description: Transketolase-like, pyrimidine-binding domain
Protein sequence:
MLGQVVTLILLLLLKVYQGKGCQGSADHVVSISGVPLQLQPNSIQTKVDSIAWKKLLPSQNGFHHILKWENGSLPSNTSNDRFSFIVKNLSLLIKAAQQQDSGLYCLEVTSISGKVQTATFQVFVFESLLPDKVEKPRLQGQGKILDRGRCQVALSCLVSRDGNVSYAWYRGSKLIQTAGNLTYLDEEVDINGTHTYTCNVSNPVSWESHTLNLTQDCQNAHQEFRFWPFLVIIVILSALFLGTLACFCVWRRKRKEKQSETSPKEFLTIYEDVKDLKTRRNHEQEQTFPGGGSTIYSMIQSQSSAPTSQEPAYTLYSLIQPSRKSGSRKRNHSPSFNSTIYEVIGKSQPKAQNPARLSRKELENFDVYS

Annotated regions:
phrase: CQGSADHVVSISGVPLQLQPNSIQTKVDSIAWKKLLPSQNGFHHILKWENGSLPSNTSNDRFSFIVKNLSLLIKAAQQQDSGLYCLEVTSISGKVQTATFQVFVF
type: DOMAIN
name: NK_rcpt_2B4_Ig_dom
description: Natural killer cell receptor 2B4, immunoglobulin domain

phrase: PDKVEKPRLQGQGKILDRGRCQVALSCLVSRDGNVSYAWYRGSKLIQTAGNLTYLDEEVDINGTHTYTCNVSNPVSWESHTLNL
type: DOMAIN
name: Ig-like_dom
description: Immunoglobulin-like domain
Protein sequence:
MKTALVFAAVVAFVAARFPDHKDYKQLADKQFLAKQRDVLRLFHRVHQHNILNDQVEVGIPMTSKQTSATTVPPSGEAVHGVLQEGHARPRGEPFSVNYEKHREQAIMLYDLLYFANDYDTFYKTACWARDRVNEGMFMYSFSIAVFHRDDMQGVMLPPPYEVYPYLFVDHDVIHMAQKYWMKNAGSGEHHSHVIPVNFTLRTQDHLLAYFTSDVNLNAFNTYYRYYYPSWYNTTLYGHNIDRRGEQFYYTYKQIYARYFLERLSNDLPDVYPFYYSKPVKSAYNPNLRYHNGEEMPVRPSNMYVTNFDLYYIADIKNYEKRVEDAIDFGYAFDEHMKPHSLYHDVHGMEYLADMIEGNMDSPNFYFYGSIYHMYHSMIGHIVDPYHKMGLAPSLEHPETVLRDPVFYQLWKRVDHLFQKYKNRLPRYTHDELAFEGVKVENVDVGKLYTYFEQYDMSLDMAVYVNNVDQISNVDVQLAVRLNHKPFTYNIEVSSDKAQDVYVAVFLGPKYDYLGREYDLNDRRHYFVEMDRFPYHVGAGKTVIERNSHDSNIIAPERDSYRTFYKKVQEAYEGKSQYYVDKGHNYCGYPENLLIPKGKKGGQAYTFYVIVTPYVKQDEHDFEPYNYKAFSYCGVGSERKYPDNKPLGYPFDRKIYSNDFYTPNMYFKDVIIFHKKYDEVGVQGH

Annotated regions:
phrase: PPYEVYPYLFVDHDVIHMAQKYWMKNAGSGEHHSHVIPVNFTLRTQDHLLAYFTSDVNLNAFNTYYRYYYPSWYNTTLYGHNIDRRGEQFYYTYKQIYARYFLERLSNDLPDVYPFYYSKPVKSAYNPNLRYHNGEEMPVRPSNMYVTNFDLYYIADIKNYEKRVEDAIDFGYAFDEHMKPHSLYHDVHGMEYLADMIEGNMDSPNFYFYGSIYHMYHSMIGHIVDPYHKMGLAPSLEHPETVLRDPVFYQLWKRVDHL
type: DOMAIN
name: Hemocyanin/hexamerin_mid_dom
description: Hemocyanin/hexamerin middle domain

phrase: RYTHDELAFEGVKVENVDVGKLYTYFEQYDMSLDMAVYVNNVDQISNVDVQLAVRLNHKPFTYNIEVSSDKAQDVYVAVFLGPKYDYLGREYDLNDRRHYFVEMDRFPYHVGAGKTVIERNSHDSNIIAPERDSYRTFYKKVQEAYEGKSQYYVDKGHNYCGYPENLLIPKGKKGGQAYTFYVIVTPYVKQDEHDFEPYNYKAFSYCGVGSERKYPDNKPLGYPFDRKIYSNDFYTPNMYFKDVIIF
type: DOMAIN
name: Hemocyanin_C
description: Hemocyanin, C-terminal

phrase: FLAKQRDVLRLFHRVHQHNILNDQVEVGIPMTSKQTSATTVPPSGEAVHGVLQEGHARPRGEPFSVNYEKHREQAIMLYDLLYFANDYDTFYKTACWARDRVNEGMFMYSFSIAVFHRDDMQ
type: DOMAIN
name: Hemocyanin_N
description: Hemocyanin, N-terminal
Protein sequence:
MLWCPSVLVPLIAVAACLPVLAIGTPLEWEFAITLKSKILFVDEFWRTLASAAHEFDELSALTFDETEELIYFNDQQHRNGSIFSLRRDALMASHIAEQAIQRTGNESVGGLAYDPLNRNLFWSDTLQKKIFFASIDSKVTETPKVLVDLSQEGARPDGVAVDVCRRKLYWTNSNITHPTVESIDLAGTNRQVIIDTDIDMPRGIVVDQLSDRIFWIDDLKGVFFALKSARLDGSDRQLVLHDKHHEPLNLAVTNDAIYWTDKTTKAVWSHPKVPIVKATTTTSPVKAEEEDATETIPDIEPEPVAEVSALLRVANLSEEARGIVARTGFYQRLQKDEHCANIVRKVKERLDLMTKKKQMRSLVDEKTAQLERDHCLNGGTYIADRVLCICPTGFKGSRCEIRECHNFCVHGTCEISDRAYPKCYCQPGFSGERCEISKCSGLCLNGGHCKLEDISEKPSCECPHNFAGERCEQNSTEICALFCRLLKHEADIYVPFGCHDICEELAKDASDKIAIPQYHHLEVCMTPSPWTSNVIIVLVLGIVSCFFLVAVIVHGFRRLYKPKRPRIRKTFVVRKQARTNSSGDTPLTNRPLATEQCEITIENCCNMNICETPCFDPKLVEQTLAKSSNCKEDKKILIHNMDDDLY

Annotated regions:
phrase: KCSGLCLNGGHCKLEDISEKPSCECPHNFAGERC
type: DOMAIN
name: EGF-like_dom
description: EGF-like domain

phrase: QLERDHCLNGGTYIADRVLCICPTGFKGSRC
type: DOMAIN
name: EGF-like_dom
description: EGF-like domain

phrase: ECHNFCVHGTCEISDRAYPKCYCQPGFSGERC
type: DOMAIN
name: EGF-like_dom
description: EGF-like domain

phrase: QVIIDTDIDMPRGIVVDQLSDRIFWIDDLKGVFFALKSARLDGSD
type: REPEAT
name: LDLR_classB_rpt
description: LDLR class B repeat

phrase: RTLASAAHEFDELSALTFDETEELIYFNDQQHRNGSIFSLRRDALM
type: REPEAT
name: LDLR_classB_rpt
description: LDLR class B repeat

phrase: KVLVDLSQEGARPDGVAVDVCRRKLYWTNSNITHPTVESIDLAGTN
type: REPEAT
name: LDLR_classB_rpt
description: LDLR class B repeat

phrase: QAIQRTGNESVGGLAYDPLNRNLFWSDTLQKKIFFASIDSKV
type: REPEAT
name: LDLR_classB_rpt
description: LDLR class B repeat

phrase: DEKTAQLERDHCLNGGTYIADRVLCICPTGFKGSRC
type: DOMAIN
name: EGF-like_dom
description: EGF-like domain

phrase: EISKCSGLCLNGGHCKLEDISEKPSCECPHNFAGERC
type: DOMAIN
name: EGF-like_dom
description: EGF-like domain

phrase: RKLYWTNSNITHPTVESIDLAGTNRQVIIDTDIDMPRGIVVDQL
type: REPEAT
name: LDLR_classB_rpt
description: LDLR class B repeat

phrase: CECPHNFAGER
type: DOMAIN
name: EGF-like_dom
description: EGF-like domain

phrase: DRIFWIDDLKGVFFALKSARLDGSDRQLVLHDKHHEPLNLAVTND
type: REPEAT
name: LDLR_classB_rpt
description: LDLR class B repeat

phrase: RKLYWTNSNITHPTVESIDLAGTNRQVIIDTDIDMPRGIVV
type: REPEAT
name: LDLR_classB_rpt
description: LDLR class B repeat
Protein sequence:
MKRDYYEVLGVGRSATKDEIKKAYRKLAMKYHPDKNPDNSEAEEKFKEANEAYEVLSNDDKRRRYDQFGHAGVGSSASSQGGPFGGGGTGDLGDIFSAFNDMFGGGARGGGSPFGFEDVFSGGGGRRSRSAGVSGSDLKIRLKLSLEEIAKGVEKTLKIKKQVACDVCNGTGSKTGELETCPTCQGTGEVRQASKTMFGQFVNIAACPTCGGEGRVVKERCTACHGEGIKQGETTVKVNIPAGVEDGNYLTLRGQGNAGPRGGMNGDLIVVIEEVEHKIFARRGDDVVYNLTLSYADMVLGTKVDIPTLEGRVKMTVPPATQPNTVLRISAKGIGHLKAPGRGDHLVRVNVFVPKDPSHQDKELLKELNKSVHMVPDEKKEHEKGFYEKVKDIFS

Annotated regions:
phrase: DYYEVLGVGRSATKDEIKKAYRKLAMKYHPDKNPDNSEAEEKFKEANEAYEVLSNDDKRRRYDQF
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: YEVLGVGRSATKDEIKKA
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: YRKLAMKYHPDKNPD
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: EAEEKFKEANEAYEVLSNDD
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: KRRRYDQFGHAGVGSSASS
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: CDVCNGTGSKTGELETCPTCQGTGEVRQASKTMFGQFVNIAACPTCGGEGRVVKERCTACHGE
type: DOMAIN
name: HSP_DnaJ_Cys-rich_dom
description: Heat shock protein DnaJ, cysteine-rich domain

phrase: DYYEVLGVGRSATKDEIKKAYRKLAMKYHPDKNPDNSEAEEKFKEANEAYEVLS
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: RDYYEVLGVGRSATKDEIKKAYRKLAMKYHPDKNPDNSEAEEKFKEANEAYEVLSNDD
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: FKEANEAYEVLSNDDKRRR
type: CONSERVED_SITE
name: DnaJ_domain_CS
description: DnaJ domain, conserved site

phrase: KIRLKLSLEEIAKGVEKTLKIKKQVACDVCNGTGSKTGELETCPTCQGTGEVRQASKTMFGQFVNIAACPTCGGEGRVVKERCTACHGEGIKQGETTVKVNIPAGVEDGNYLTLRGQGNAGPRGGMNGDLIVVIEEVEHKIFARRGDDVVYNLTLSYADMVLGTKVDIPTLEGRVKMTVPPATQPNTVLRISAKGIGHLKAPGRGDHLVRVNVFV
type: DOMAIN
name: DnaJ_C
description: Chaperone DnaJ, C-terminal

phrase: DYYEVLGVGRSATKDEIKKAYRKLAMKYHPDKNPDNSEAEEKFKEANEAYEVLSNDDKRRRY
type: DOMAIN
name: DnaJ_domain
description: DnaJ domain

phrase: CDVCNGTGSKTGELETCPTCQGTGEVRQASKTMFGQFVNIAACPTCGGEGRVVKERCTACHGE
type: DOMAIN
name: HSP_DnaJ_Cys-rich_dom
description: Heat shock protein DnaJ, cysteine-rich domain

phrase: GVEKTLKIKKQVACDVCNGTGSKTGELETCPTCQGTGEVRQASKTMFGQFVNIAACPTCGGEGRVVKERCTACHGEGIKQG
type: DOMAIN
name: HSP_DnaJ_Cys-rich_dom
description: Heat shock protein DnaJ, cysteine-rich domain
Protein sequence:
MTLIGWFQIALFCAVVLALVKPLGAYMTRVFAGERTILSPLLAPIERGLYRAAGIDARHEQTWLGYGLAMLVFHALGFVSLYAILRLQDGLPLNPMGQAAVAPDLALNTAVSFVTNTNWQNYGGESTLSYLSQMLGLTPQNFLSAATGLALAVALTRGFARASSRTVGSFWVDLTRCTLYVLLPLCIGLTLFYVWQGMPQTLGASVDATTLEGARQTIAVGPVASQVAIKMLGTNGGGFFNANAAHPFENPTALANLVQMVTIFALGAAMTNVFGRMVGDERQGWAILAAMGVLFLAGVAVTYASEAAGSPVLNGLGFSAGNMEGKEIRFGIVASALFAVVTTAASCGAVNAMHDSFTALGGLIPMLNMQLGEIIVGGVGAGLYGMLVFVLVALFVAGLMVGRTPEYLGKKIEAKEVKMAMLAILCLPLMMLGLAALATVLPAGLAGPANAGPHGFSEILYAFTSAAANNGSAFGGLTGNTLFYNTTLALGMAVGRFMVIVPALAIAGSLAAKKTLPASAGTLPTHGGLFVGLLVGVILIVGGLTFFPALALGPVVEHLAGAAGQTFAAGG

Annotated regions:
Protein sequence:
MACERLGGQSGAADVDAAAPAMAAVNLTLGFAGKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLEFRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAVKDRLSDSPFRLSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFSSPKHAETARYVAGLSGDVKDAKRGN

Annotated regions:
phrase: LSGGQQQLLCLART
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: ARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLEFRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAVKDRLSDSPFRLSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: MAAVNLTLGFAGKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLEFRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAVKDRLSDSPFRLSGGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFSSPKHAETARY
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: LDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLEFRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAVKDRLSDSPFRLSGGQQQLLCLARTLAVNPEVLLLDEPT
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain
Protein sequence:
MEQFYYVLKYLILGLFQGLTEPIPISSSGHLVLAQHLLGLKIEGFSFELLVNSASLLAVLLIYRNDLIRLTKNGLSYIFTRAEDAKSDFFFIIYLVIATIPAGVIGVLFKDYIDQYLKGVKMVGISLLITAVGLWIIRNLRGRKNDGDLSMKDAIIVGLAQACALIPGISRSGATIVAAMLLGMKQETALRFSFLLYIPVSLGGLLLSITDIANDPNLDTLFVPYVVAFIATFIMTYISLKWFMNIMAKGNLKYFSFYCIIVGVLTLIFL

Annotated regions:
Protein sequence:
MPEPSKSAPAPKKGSKKAISKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSSK

Annotated regions:
phrase: REIQTAVRLLLPGELAKHAVSE
type: CONSERVED_SITE
name: HISTONE_H2B_site
description: Histone H2B, conserved site

phrase: KKGSKKAISKAQKKDGKKRKRSRKESYSVYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIASEASRLAHYNKRSTITSREIQTAVR
type: DOMAIN
name: Histone_H2A/H2B/H3
description: Histone H2A/H2B/H3
Protein sequence:
MIEADRLIQPQVLAQDEHIDRAMRPKLLDDYTGQDDTRAQLKIFIQAAINRKEALDHMLIFGPPGLGKTTLAMIVANEMGVNIKSTSGPVLEKAGDLAALLTNLDEGDVLFIDEIHRLSPVVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGATTRAGALTSPLRARFGIPLRLEFYNVKDLCTIVTRSAKVMELAIDAGGAHEIAKRSRGTPRIANRLLRRVRDYAEVKFAGEVTEDVAQQALDMLDVDQEGFDYLDRKLLLSIIDKFMGGPVGLDNLAAAIGEDRETIEDVLEPFLIQQGFIQRTPRGRIVTPRAYQHFNIITPDVPK

Annotated regions:
phrase: ALDHMLIFGPPGLGKTTLAMIVANEMGVNIKSTSGPVLEKAGDLAALLTNLDEGDVLFIDEIHRLSPVVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGATTRAGALTSPLRARFGIPLR
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: YNVKDLCTIVTRSAKVMELAIDAGGAHEIAKRSRGTPRIANRLLRRVRDYAEVKFAGEVTEDVAQQALDMLDV
type: DOMAIN
name: AAA_lid_4
description: RuvB, AAA lid domain

phrase: MRPKLLDDYTGQDDTRAQLKIFIQAAINRKEALDHMLIFGPPGLGKTTLAMIVANEMGVNIKSTSGPVLEKAGDLAALLTNLDEGDVLFIDEIHRLSPVVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGATTRAGALTSPLRARFGIPLR
type: DOMAIN
name: RuvB-like_N
description: RuvB-like P-loop domain

phrase: EGFDYLDRKLLLSIIDKFMGGPVGLDNLAAAIGEDRETIEDVLEPFLIQQGFIQRTPRGRIVTPRAYQH
type: DOMAIN
name: RuvB_C
description: RuvB C-terminal winged helix domain
Protein sequence:
MKFIIKLFPEITIKSQTVRLRFIKILTSNIRNVLKPLGEEIAVVRHWDNIEVRVKGETKHDEICDMLTRIPGIHHVLEVEEKPFTSLHHIYEMVHDSYAPSLENKTFCVRVKRRGKHEFTSIEAERYIGGGLNQHIPSAKVKLTAPDVTVHLEIEDENLILVKARYEGIGGFPIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVKQIAHYLWNRFGSSHKVRFIAVNFEPVVAEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQAIVTGEALGQVSSQTLTNLRLIDNASDTLVLRPLISHDKEHIIKIARQIGTEDFAKTMPEYCGVISKSPTVKAVKAKIEAEEANFDFSILDQVVEQSQNIDIRQIAQESREQVMEVEMVSELAPEHEVILDIRSTDEHEEKPLSIEGIEVKHIPFYRLGTQFGDLPKDKTYLLYCERGVMSRLQALYLQEQGFNNVKVYRP

Annotated regions:
phrase: APEHEVILDIRSTDEHEEKPLSIEGIEVKHIPFYRLGTQFGDLPKDKTYLLYCERGVMSRLQALYLQEQGFNNVKV
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain

phrase: IDIRQIAQESREQVMEVEMVSELAPEHEVILDIRSTDEHEEKPLSIEGIEVKHIPFYRLGTQFGDLPKDKTYLLYCERGVMSRLQALYLQEQGFNNVKVYR
type: DOMAIN
name: THII_Thiazole_biosynth_dom
description: ThiI, thiazole biosynthesis domain

phrase: PEITIKSQTVRLRFIKILTSNIRNVLKPLGEEIAVVRHWDNIEVRVKGETKHDEICDMLTRIPGIH
type: DOMAIN
name: ThiI_fer
description: ThiI, ferredoxin-like domain

phrase: HEVILDIRSTDEHEEKPLSIEGIEVKHIPFYRLGTQFGDLPKDKTYLLYCERGVMSRLQALYLQEQGFNNVKV
type: DOMAIN
name: Rhodanese-like_dom
description: Rhodanese-like domain

phrase: KFIIKLFPEITIKSQTVRLRFIKILTSNIRNVLKPLGEEIAVVRHWDNIEVRVKGETKHDEICDMLTRIPGIHHVLEVEEKPFTSLHHIYEMVHDSYAPSLENKTFCVRVKRRGKHEFTSIEAERYIGGGLNQHIPSAKVKLTAPDVTVHLEIEDENLILVKARYEGI
type: DOMAIN
name: THUMP_ThiI
description: ThiI, THUMP domain

phrase: IGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVKQIAHYLWNRFGSSHKVRFIAVNFEPVVAEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQAIVTGEALGQVSSQTLTNLRLIDNASDTLVLRPLISHDKEHIIKIARQIGTEDFAKTMPEYCGVISKSPTVK
type: DOMAIN
name: ThiI_AANH
description: Thil, AANH domain

phrase: DEICDMLTRIPGIHHVLEVEEKPFTSLHHIYEMVHDSYAPSLENKTFCVRVKRRGKHEFTSIEAERYIGGGLNQHIPSAKVKLTAPDVTVHLEIEDENLILVKA
type: DOMAIN
name: THUMP_dom
description: THUMP domain

phrase: HVLEVEEKPFTSLHHIYEMVHDSYAPSLENKTFCVRVKRRGKHEFTSIEAERYIGGGLNQHIPSAKVKLTAPDVTVHLEIEDENLILVKA
type: DOMAIN
name: THUMP_dom
description: THUMP domain

phrase: IIKLFPEITIKSQTVRLRFIKILTSNIRNVLKPLGEEIAVVRHWDNIEVRVKGETKHDEICDMLTRIPGIHHVLEVEEKPFTSLHHIYEMVHDSYAPSLENKTFCVRVKRRGKHEFTSIEAERYIGGGLNQHIPSAKVKLTAPDVTVHLEIEDENLILVKARYEGIGGFPIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVKQIAHYLWNRFGSSHKVRFIAVNFEPVVAEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQAIVTGEALGQVSSQTLTNLRLIDNASDTLVLRPLISHDKEHIIKIARQIGTEDFAKTMPEYCGVISKSPTVKAVKAKIEAEEANFDFSILDQVV
type: DOMAIN
name: ThiI_N
description: ThiI, N-terminal

phrase: TSLHHIYEMVHDSYAPSLENKTFCVRVKRRGKHEFTSIEAERYIGGGLNQHIPSAKVKLTAPDVTVHLEIEDENL
type: DOMAIN
name: THUMP_dom
description: THUMP domain

phrase: GTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEIGVKQIAHYLWNRFGSSHKVRFIAVNFEPVVAEILEKVDDGQMGVVLKRMMVRAASKVAERYGVQAIVTGEALGQVSSQTLTNLRLIDNASDTLVLRPLISHDKEHIIKIARQIGTEDFAKTMPEYCGVISKSPTVKAVKAKIEAEEANFD
type: DOMAIN
name: ThiI_AANH
description: Thil, AANH domain
Protein sequence:
MLTDIEISRQATPQPISDIAKKFGIKKDELSQFGDAKAKVKISILDRVKDNVEGKLVIVTAVTPTPFGEGKTVTSIGLTQGLNAIGRKTCACIRQPSMGPVFGIKGGAAGGGYSQVIPMEEMNLHLTGDIHAVSSAHNLAAAAVDARLFHESRLSADEYTLQSGSAPLNIDPEQILWRRVVDHNERSLRNITVGLGDINGPVHASGFDITAASELMAILALSHDLKDMRKRIGRLVLALDKHAQPITAEMIGVAGAMTVIMSNAIEPTLMQTLTGDPCLIHAGPFANIAHGNSSIIADRIALKFADFVVTEGGFGSDMGFEKFCNIKVRESGKAPDAAVLVVTLKALKANSGLESKQDINLPDQARLEAGFLNLKWHMDNVSQYGVPVVVALNRFPSDTQEELEWLKREVMLAGAFGCEISDAFSLGANGAEALAHKVVEATEQDSDFRLLYSSDASIEAKLLTIAESGYGARGVVLSDEAKAQLEQIKAMGLDNLAVCIAKTPLSISHDPLLKGVPQGFELPIAQLKINAGAGFITALVGKVMTMPGLGVKPGYLNIDINEQDEIVGLA

Annotated regions:
phrase: GIKGGAAGGG
type: CONSERVED_SITE
name: Formate_THF_ligase_CS
description: Formate-tetrahydrofolate ligase, FTHFS, conserved site
Protein sequence:
MTTLSPEAFAGHTPMMQQYLRIKADHPDTLVFYRMGDFYELFFEDAEKAARLLDLTLTQRGASAGTPIKMAGVPHHAVEQYLAKLVKMGESVAICEQIGDPATSKGPVERKVVRVVTPGTLTDAALLSDKNDVYLLAMCTGHNKRGVAVNIGLAWLNLASGALRLAEIEPDQLGTALERIRPAEILTADGATDAVPAGAGAIKRVPAWHFDIASGTQRLCDQLDVAGLDGFGAHSLTSACGAAGALLLYAAATQGQQLRHVRSLKVENETEYIGLDPATRRNLELTETLRGTESPTLYSLLDTCCTTMGSRLLRHWLHHPPRASVAAQSRQQAIGALLDAPADASLDALRSALRQIADVERITGRLALLSARPRDLSSLRDTFAALPALRERISAIVANADALTRVDAALAPPAECLDLLTSAIAPEPAAMVRDGGVIARGYDAELDELRDISENCGQFLIDLEARERTRTGIANLRVEYNKVHGFYIEVTRGQTDKVPDDYRRRQTLKNAERYITPELKTFEDKALSAQERALARERALYDGVLQALLPFIPECQRVASALAELDVLAAFAERARTLDWVAPTFTDEIGIEIEQGRHPVVEAQVEQFIANDCRFGAERKLLLITGPNMGGKSTFMRQTALIALMAYVGSYVPAKSACFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLVLMDEIGRGTSTFDGLALAWAIARHLLAQNGCYTLFATHYFELTQLPAEFPQAANVHLSAVEHGHGIVFLHAVNEGPANQSYGLQVAQLAGVPAPVIRAARKHLAYLEQQSATQNTPQLDLFSAPPAAAADELECADAPAVSALPHPALEKLRDIDPDDLKPRDALDLLYELRTLVRSHDADGHA

Annotated regions:
phrase: TESPTLYSLLDTCCTTMGSRLLRHWLHHPPRASVAAQSRQQAIGALLDAPADASLDALRSALRQIADVERITGRLALLSARPRDLSSLRDTFAALPALRERISAIVANADALTRVDAALAPPAECLDLLTSAIAPEPAAMVRDGGVIARGYDAELDELRDISENCGQFLIDLEARERTRTGIANLRVEYNKVHGFYIEVTRGQTDKVPDDYRRRQTLKNAERYITPELKTFEDKALSAQERALARERALYDGVLQALLPFIPECQRVASALAELDVLAAFAERARTLDWVAPTFTDEIGIEIEQGRHPVVEA
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core

phrase: RKLLLITGPNMGGKSTFMRQTALIALMAYVGSYVPAKSACFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLVLMDEIGRGTSTFDGLALAWAIARHLLAQNGCYTLFATHYFELTQLPAEFPQAANVHLSAVEHGHGIVFLHAVNEGPANQSYGLQVAQLAGVPAPVIRAARKHL
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: GVAVNIGLAWLNLASGALRLAEIEPDQLGTALERIRPAEILTADGATDAVPAGAGAIKRVPAWHFDIASGTQRLCDQLDVAGLDGFGAHSLTSACGAAGALLLYAAATQGQQLRH
type: DOMAIN
name: DNA_mmatch_repair_MutS_con_dom
description: DNA mismatch repair protein MutS, connector domain

phrase: SLVLMDEIGRGTSTFD
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: GYDAELDELRDISENCGQFLIDLEARERTRTGIANLRVEYNKVHGFYIEVTRGQTDKVPDDYRRRQTLKNAERYITPELKTFEDKALSAQE
type: DOMAIN
name: DNA_mismatch_repair_MutS_clamp
description: DNA mismatch repair protein MutS, clamp

phrase: TPMMQQYLRIKADHPDTLVFYRMGDFYELFFEDAEKAARLLDLTLTQRGASAGTPIKMAGVPHHAVEQYLAKLVKMGESVAICEQIGDPATSKGPVERKVVRVVTPGTLTD
type: DOMAIN
name: DNA_mismatch_repair_MutS-lik_N
description: DNA mismatch repair protein MutS-like, N-terminal

phrase: LITGPNMGGKSTFMRQTALIALMAYVGSYVPAKSACFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLVLMDEIGRGTSTFDGLALAWAIARHLLAQNGCYTLFATHYFELTQLPAEFPQAANVHLSAVEHGHGIVFLHAVNEGPANQSYGLQVAQLAGVPAPVIRAARKHLAY
type: DOMAIN
name: DNA_mismatch_repair_MutS_C
description: DNA mismatch repair protein MutS, C-terminal

phrase: ATRRNLELTETLRGTESPTLYSLLDTCCTTMGSRLLRHWLHHPPRASVAAQSRQQAIGALLDAPADASLDALRSALRQIADVERITGRLALLSARPRDLSSLRDTFAALPALRERISAIVANADALTRVDAALAPPAECLDLLTSAIAPEPAAMVRDGGVIARGYDAELDELRDISENCGQFLIDLEARERTRTGIANLRVEYNKVHGFYIEVTRGQTDKVPDDYRRRQTLKNAERYITPELKTFEDKALSAQERALARERALYDGVLQALLPFIPECQRVASALAELDVLAAF
type: DOMAIN
name: DNA_mismatch_repair_MutS_core
description: DNA mismatch repair protein MutS, core
Protein sequence:
MQDQRNLLVFSGNANKPLAQSICKELGVRMGKALVTRFSDGEVQVEIEESVRRQEVFVIQPTCAPSAENLMELLVLIDALKRASAASVTAVIPYFGYSRQDRRMRSSRVPITAKVAAKMICAMEADRVLTVDLHADQIQGFFDVPIDNVYASPLLLADIWRAYGTDNLIVVSPDVGGVVRARAVAKRLDDADLAIIDKRRPRANVATVMNIIGDVQGKTCVLVDDLVDTAGTLCAAAAALKQRGALKVVAYITHPVLSGPAVDNINNSQLDELVVTDTIPLSAAARTCPKIRQLSVAELLAETIHRIAFGESVSSLYVD

Annotated regions:
phrase: DLHADQIQGFFDVPI
type: CONSERVED_SITE
name: PRib_PP_synth_CS
description: Phosphoribosyl pyrophosphate synthetase, conserved site

phrase: LVFSGNANKPLAQSICKELGVRMGKALVTRFSDGEVQVEIEESVRRQEVFVIQPTCAPSAENLMELLVLIDALKRASAASVTAVIPYFGYSRQDRRMRSSRVPITAKVAAKMIC
type: DOMAIN
name: Pribosyltran_N
description: Ribose-phosphate pyrophosphokinase, N-terminal domain

phrase: LLADIWRAYGTDNLIVVSPDVGGVVRARAVAKRLDDADLAIIDKRRPRANVATVMNIIGDVQGKTCVLVDDLVDTAGTLCAAAAALKQRGALKVVAYITHPVLSGPAVDNINNSQLDELVVTD
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain
Protein sequence:
MAMRQCAIYGKGGIGKSTTTQNLVAALAELGKKVMIVGCDPKADSTRLILHSKAQNTIMEMAAEAGTVEDLELEDVLKTGYGDIKCVESGGPEPGVGCAGRGVITAINFLEEEGAYEDDLDFVFYDVLGDVVCGGFAMPIRENKAQEIYVVCSGEMMAMYAANNICKGIVKYANSGSVRLGGLICNSRNTDREDELIMALADKLGSQMIHFVPRDNVVQRAEIRRMTVIEYDPAAKQADEYRTLAKKIVENKKLVIPTPISMDELEALLMEFGIMDEEDMTIVGKTAAEEVVA

Annotated regions:
phrase: DVLGDVVCGGFAM
type: CONSERVED_SITE
name: NifH/chlL_CS
description: NifH/chlL conserved site

phrase: ESGGPEPGVGCA
type: CONSERVED_SITE
name: NifH/chlL_CS
description: NifH/chlL conserved site
Protein sequence:
MTKSELIERIVTQQGLLSSKDVELAIKTMLEQMAQALATGERIEIRGFGSFSLHYRAPRVGRNPKTGQSVSLDGKFVPHFKPGKELRDRVNDD

Annotated regions:
phrase: GFGSFSLHYRAPRVGRNPK
type: CONSERVED_SITE
name: Histone-like_DNA-bd_CS
description: Histone-like DNA-binding protein, conserved site
Protein sequence:
MLDLKNLQNNFDEVAKKLKNKKVDENILKKLAELFASLKKEKTALEEFQAFQNKFSKELATAEDKESLKAKLSENKSKINEQSAKVNALENELEEIAHAIPNIPDECVPVGEDEDENVELKKVLNPSSFDFTPKEHFELGESLNWLDFVRGVKISQSRFCVLKNEGALLSRALVNYMIDFNRSRGFEFVNVPFLVNGATMFGTGQLPKFKEDMYKVDDEDLYLISTSEIPVTNLYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKPEQSDSVFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWLPGQNKYREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIMENYQDKEGKIHIPDVLKKYF

Annotated regions:
phrase: LVNYMIDFNRSRGFEFVNVPFLVNGATMFGTGQLPKFKEDMYKVDDEDLYLISTSEIPVTNLYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKPEQSDSVFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWLPGQNKYREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIMENYQDKEGKIHI
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: MLDLKNLQNNFDEVAKKLKNKKVDENILKKLAELFASLKKEKTALEEFQAFQNKFSKELATAEDKESLKAKLSENKSKINEQSAKVNALENELEEIAHAIPNI
type: DOMAIN
name: Ser-tRNA-synth_1_N
description: Serine-tRNA synthetase, type1, N-terminal

phrase: YKVDDEDLYLISTSEIPVTNLYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKPEQSDSVFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWLPGQNKYREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIMEN
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: ENVELKKVLNPSSFDFTPKEHFELGESLNWLDFVRGVKISQSRFCVLKNEGALLSRALVNYMIDFNRSRGFEFVNVPFLVNGATMFGTGQLPKFKEDMYKVDDEDLYLISTSEIPVTNLYSGEILASETLPIKMTCYSACFRKEAGSAGRDTRGIIRQHQFEKVELVSITKPEQSDSVFNEMLECASDLLSSLGLAHRHLMLCTGDLGFSAAKTVDLEVWLPGQNKYREISSVSNCRDFQARRAKIRYKNEQGKNELVHTLNGSSLAVGRTLVAIMENYQDKEGKIHIPDVLKK
type: DOMAIN
name: SerRS_core
description: Serine-tRNA ligase catalytic core domain