nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MRFSLSTTGLQDWNGDVLVVGLLQDQPATDLEARFPGLGAALAQQQFKGKPSEQLLINRLGNNGPQRLVVLGLGPANAFNLDGVRSAAARAAKAASGHTGSLGLQLSWDGLEPTAAAAAAAEAARLALYADQRFRKAPEPRRQPEALELIGLPATAAAGLQTVDATCAGVELARELVAAPPNVVTPAALAETAAELARNHGLELTVLERADCEARGMGAFLCVSQGSDLDPKLIHLIYRPDGEVKRRVALVGKGLTFDSGGYNLKVGAAQIDMMKFDMGGSAAVLGAMRSIAERKPAGVEVHMIVASCENMINGSAVHPGDIVTAADGTTIEINNTDAEGRLTLADALLYASEQKPDAVVDLATLTGACVIALGDEMAGLWSNNDGLATALQQAADAGGEGLWRMPLRASYKEGLKSKLADFKNTGPRPGGSITAALFLEHFVGDGIAWAHIDIAGTVWSDKGRGLDPAGATGYGVRTLANWICNPE

Annotated regions:
phrase: LARELVAAPPNVVTPAALAETAAELARNHGLELTVLERADCEARGMGAFLCVSQGSDLDPKLIHLIYRPDGEVKRRVALVGKGLTFDSGGYNLKVGAAQIDMMKFDMGGSAAVLGAMRSIAERKPAGVEVHMIVASCENMINGSAVHPGDIVTAADGTTIEINNTDAEGRLTLADALLYASEQKPDAVVDLATLTGACVIALGDEMAGLWSNNDGLATALQQAADAGGEGLWRMPLRASYKEGLKSKLADFKNTGPRPGGSITAALFLEHFVGDGIAWAHIDIAGTVWSDKGRGLDPAGATGYGVRT
type: DOMAIN
name: Peptidase_M17_C
description: Peptidase M17, leucyl aminopeptidase, C-terminal

phrase: ARFPGLGAALAQQQFKGKPSEQLLINRLGNNGPQRLVVLGLGPANAFNLDGVRSAAARAAKAASGHTGSLGLQLSWDGLEPTAAAAAAAEAARLALYADQRFR
type: DOMAIN
name: Peptidase_M17_N
description: Peptidase M17, leucyl aminopeptidase, N-terminal

phrase: NTDAEGR
type: DOMAIN
name: Peptidase_M17_C
description: Peptidase M17, leucyl aminopeptidase, C-terminal
Protein sequence:
MTPEHLPTEQYEAQLAEKVVRLQSMMAPFSDLVPEVFRSPVSHYRMRAEFRIWHDGDDLYHIIFDQQTKSRIRVDSFPAASELINQLMTAMIAGVRNNPILRHKLFQIDYLTTLRNQAVVSLLYHKKLDDEWRQQAEALRDALRAQNLNVHLIGRATKTKIALDQDYIDERLPIAGKEMIYRQVENSFTQPNAAMNIQMLEWALDVTKGSKGDLLELYCGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPRSGLDSETEKMVQAYPRILYISCNPETLCKNLETLSQTHKVERLALFDQFPYTHHMECGVLLTAK

Annotated regions:
phrase: DPPRSGLDSETEKMVQAYPRILYISCNPE
type: ACTIVE_SITE
name: MeTrfase_TrmA_AS
description: RNA methyltransferase TrmA, active site

phrase: FDQFPYTHHM
type: CONSERVED_SITE
name: MeTrfase_TrmA_CS
description: RNA methyltransferase TrmA, conserved site
Protein sequence:
MSRVANNPITVPKGVEVTLGDGIAVKGPLGSMSQPMSSDVTVALNDGVLTFAPVGSSIQANAMAGTLRALVNNMVQGVSKGFERKLTLVGVGYRAQAQGDALNLSLGFSHPVVHKMPAGIKVETPTQTEIVIKGIDRQAVGQVAADVRAYRPPEPYKGKGVRYSDEVVIKKETKKK

Annotated regions:
phrase: PEPYKGKG
type: CONSERVED_SITE
name: Ribosomal_uL6_CS
description: Large ribosomal subunit protein uL6, conserved site

phrase: VPKGVEVTLGDGIAVKGPLGSMSQPMSSDVTVALNDGVLTFAPVGSSIQANAMAGTLRALVNNMVQGVSK
type: DOMAIN
name: Ribosomal_uL6_a/b-dom
description: Large ribosomal subunit protein uL6, alpha-beta domain

phrase: VGVGYRAQAQGDALNLSLGFSHPVVHKMPAGIKVETPTQTEIVIKGIDRQAVGQVAADVRAYRPPEPYKGKGVR
type: DOMAIN
name: Ribosomal_uL6_a/b-dom
description: Large ribosomal subunit protein uL6, alpha-beta domain
Protein sequence:
MELTHFDEEGRARMVDVSAKAETTRVATARGKVEMQAETLERIRSGQIAKGDVLAVAQVAGIMAAKQTSNVIPMCHPLAITGAKLNFEIVPPGTIEIEGIVKVTGKTGVEMEALTAVSVAALTIYDMCKAIDKTMVISDIRLMEKTGGKSGHFIREDHLKSTT

Annotated regions:
phrase: MVDVSAKAETTRVATARGKVEMQAETLERIRSGQIAKGDVLAVAQVAGIMAAKQTSNVIPMCHPLAITGAKLNFEIVPPGTIEIEGIVKVTGKTGVEMEALTAVSVAALTIYDMCKAIDKTMVISDIRLMEKTG
type: DOMAIN
name: Mopterin_CF_biosynth-C_dom
description: Molybdopterin cofactor biosynthesis C (MoaC) domain
Protein sequence:
MVWNTNLRWRLPVTCLLLQVALVVLFGVFVRYDMDADPHWIDKKEAENSTSDMENEFYYRYPSFQDVHVMIFVGFGFLMTFLQRYGYSSVGFNFLLAAFGIQWALLLQGWFHSYYRGYIRVGVENLINADFCVGSVCVAFGAVLGKVSPVQLLIMTLFQVTLFSVNEFILLNLLEVKDAGGSMTIHTFGAYFGLTVTWILYRPGLHQSKERQSSVYHSDLFAMIGTLFLWMYWPSFNSAVSNHGDAQHRAAINTYCSLAACVLTSVALSSALHKKGKLDMVHIQNATLAGGVAVGTAAEMMLMPYGSLIVGFICGIVSTLGFVYLTPFLESRLRVQDTCGIHNLHGIPGIIGAIVGAVTASCANTDVYGVNGLTQAFGFDGFKTNRTPSMQGKFQAAGLFVSLAMALVGGIIVGIILKLPFWGQPADENCFEDAIYWEMPEEPKSTVLHPEDSTLKPSEP

Annotated regions:
phrase: SDMENEFYYRYPSFQDVHVMIFVGFGFLMTFLQRYGYSSVGFNFLLAAFGIQWALLLQGWFHSYYRGYIRVGVENLINADFCVGSVCVAFGAVLGKVSPVQLLIMTLFQVTLFSVNEFILLNLLEVKDAGGSMTIHTFGAYFGLTVTWILYRPGLHQSKERQSSVYHSDLFAMIGTLFLWMYWPSFNSAVSNHGDAQHRAAINTYCSLAACVLTSVALSSALHKKGKLDMVHIQNATLAGGVAVGTAAEMMLMPYGSLIVGFICGIVSTLGFVYLTPFLESRLRVQDTCGIHNLHGIPGIIGAIVGAVTASCANTDVYGVNGLTQAFGFDGFKTNRTPSMQGKFQAAGLFVSLAMALVGGIIVGIILKLPFWGQPADENCFE
type: DOMAIN
name: NH4_transpt_AmtB-like_dom
description: Ammonium transporter AmtB-like domain
Protein sequence:
MTHFPWLSTIVLFPLLASLAIPWLPDRKGTTVRWYALGVGLIDFSLIAYMFGRYYDFEQTSLQFVEDITWIDRLHLHWSLGVDGLSMPLVLLTGFITTLATLAAWPVTKNPRLFYFLMLAMYTGQLGVFVVQDLLLFFLMWELELIPVYLLVSCWGGKKRLYAATKFILYTALGSIFILLGALTMPFMGIQGVTFDMSTLAYREYSLPVEILLYTGFLIAYGVKLPAIPVHTWLPDTHGEAHYSTCMLLAGILLKMGGYALIRINMNMLPHAHALFSPWLIGVGVVNIIYAALTSFAQRNLKRKIAYSSVSHMGFVLIGIGSLSEAGLNGAMLQMISHGLIGASLFFLAGTTYDRTRTLVLEEMGGLATFMPKTFALFTACSLASLALPGMSGFFAELLVFLGLVTSEAYSPTFRAIMTVFEAIGILLTPIYLLSMLRQLFYGRSIGRPKALIDAGPREVFVVSCLLVPILGIGIYPKLATAIYVNTTDHVVQHVLSALR

Annotated regions:
phrase: QDLLLFFLMWELELIPVYLLVSCWGGKKRLYAATKFILYTALGSIFILLGALTMPFMGIQGVTFDMSTLAYREYSLPVEILLYTGFLIAYGVKLPAIPVHTWLPDTHGEAHYSTCMLLAGILLKMGGYALIRINMNMLPHAHALFSPWLIGVGVVNIIYAALTSFAQRNLKRKIAYSSVSHMGFVLIGIGSLSEAGLNGAMLQMISHGLIGASLFFLAGTTYDRTRTLVLEEMGGLATFMPKTFALFTACSLASLALPGMSGFFAELLVFLGLVTSEAY
type: DOMAIN
name: ND/Mrp_TM
description: NADH:quinone oxidoreductase/Mrp antiporter, transmembrane domain
Protein sequence:
MISYSLPNERPNDFSRVIPVVKDIIESVKTKGDNALYELTEKLDKVKIDNIKAREEELKTQASKLDPKVKQAIDTAYEQLKAFHEMLVPPNIGGGYQGISFGVIWRSIEKIGIYVPSGKYSYPSTLLMAGIPAKVAKVKEIYVASPPTQEGTVNPALAYVAIKLGVNEVYKIGGAQAIAALAFGTESVKKVYKIVGPGNVYVQAAKYLVSSVVGIDGIEGPTELVIIADETAKAEYVALDMKAQAEHGPDTYIVLLSNDDELIRRVEEKIKNDKKIYYIIKTKNLDEAIEIANKIAPEHLSLYVKDAYTLMDKIVNAGAISLGNTPPAIIDYVAGPNHILPTNGWAKIRGGITVYDFIKPTMYANVRDINKQLLEASISLANYEGFIIHGKSIGARYE

Annotated regions:
phrase: IDGIEGPTELVIIADETAKAEYVALDMKAQAE
type: CONSERVED_SITE
name: Histidinol_DH_CS
description: Histidinol dehydrogenase, conserved site
Protein sequence:
MKILFATSNPNKAKEIAALLPESFELLTLNDINVTEEIPETQNTLDGNAKQKSEYILTNFQLDCFADDTGLEIPALNNEPGVKSARYAGEQRDSEANMQLVLDRLKDKEDRSARFRTVISLELNGEQHLFEGIVNGSIREGKVGDGGFGYDPIFEPENCGKTFGEMSMNEKNRYSHRARAFAKMIAFLSE

Annotated regions:
Protein sequence:
MTGTPDVFPPATPGGAPLVALPAGPRKPDQVKGKLYIKTHGCQMNEYDSAKMADVLAASDGLELTDTPEDADVILVNTCSIREKAQEKVFSQLGVWKGLKNKGREVIIGVGGCVASQEGEAIIKRAPFVDLVFGPQTLHRLPELIRARREQKRPQVDISFPEIEKFDRLPEPRAEGASAFVSIMEGCSKYCSFCVVPYTRGTEVSRPFEDVVVEVAQLAAQGVREINLLGQNVNAYRGPYGDGEFADLGLLIRTIAEIDGVGRIRFTTSHPLEFSDSLIDAFRDVPQLANFLHLPVQAGSDRVLSAMKRGYTALEFKSKIRKLRAVRPDISISSDFIVGFPGETDADFEKTMKLIEDIGFDHSFSFIYSRRPGTPAADLEDTISDAEKHARLSRLQERINAHAAGISEKMVGTVQTVLVEGPSRKNPNELTGKTENMRSVNFPAPARLIGQFVDVVITEALTNSLRARVVAE

Annotated regions:
phrase: VSIMEGCSKYCSFCVVPYTR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: RAEGASAFVSIMEGCSKYCSFCVVPYTRGTEVSRPFEDVVVEVAQLAAQGVREINLLGQNVNAYRGPYGDGEFADLGLLIRTIAEIDGVGRIRFTTSHPLEFSDSLIDAFRDVPQLANFLHLPVQAGSDRVLSAMKRGYTALEFKSKIRKLRAVRPDISISSDFIVGFPGETDADFEKTMKLIEDIGFDHSFSFIYSRRPGTPAADLEDTISDAEKHARLSRLQERINAHAAGI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: KLYIKTHGCQMNEYDSAKMADVLAASDGLELTDTPEDADVILVNTCSIREKAQEKVFSQLGVWKGLKNKGREVIIGVGGCVASQEGEAIIKRAPFVDLVF
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: GKLYIKTHGCQMNEYDSAKMADVLAASDGLELTDTPEDADVILVNTCSIREKAQEKVFSQLGVWKGLKNKGREVIIGVGGCVASQEGEAIIKRAPFVDLVFGPQTLHRLPELIRARR
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: KGKLYIKTHGCQMNEYDSAKMADVLAASDGLELTDTPEDADVILVNTCSIREKAQEKVFSQLGVWKGLKNKGREVIIGVGGCVASQEGEAIIKRAPFVDLVFGPQTLHRLPELIRARREQKRPQVDISFPEIEKFDRLPEPRAEGASAFVSIMEGCSKYCSFCVVPYTRGTEVSRPFEDVVVEVAQLAAQGVREINLLGQNVNAYRGPYGDGEFADLGLLIRTIAEIDGVGRIRFTTSHPLEFSDSLIDAFRDVPQLANFLHLPVQAGSDRVLSAMKRGYTALEFKSKIRKLRAVRPDISISSDFIVGFPGETDADFEKTMKLIEDIGFDHSFSFIYSRRPGTPAADLEDTISDAEKHARLSRLQERINAHAAGISEKMVGTVQTVLVEGPSRKNPNELTGKTENMRSVNFPAPARLIGQFVDVVITEALTNSLRARVV
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: ASAFVSIMEGCSKYCSFCVVPYTRGTEVSRPFEDVVVEVAQLAAQGVREINLLGQNVNAYRGPYGDGEFADLGLLIRTIAEIDGVGRIRFTTSHPLEFSDSLIDAFRDVPQLANFLHLPVQAGSDRVLSAMKRGYTALEFKSKIRKLRAVRPDISISSDFIVGFPGETDADFEKTMKLIEDIGFDHSFSFIYSRRPGTPAADLEDTISDAEKHARLSRLQ
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: VSIMEGCSKYCSFCVVPYTRGTEVSRPFEDVVVEVAQLAAQGVREINLLGQNVNAYRGPYGDGEFADLGLLIRTIAEIDGVGRIRFTTSHPLEFSDSLIDAFRDVPQLANFLHLPVQAGSDRVLSAMKRGYTALEFKSKIRKLRAVRPDISISSDFIVGFPGETDADFEKTMKL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: EKMVGTVQTVLVEGPSRKNPNELTGKTENMRSVNFPAPARLIGQFVDVVITEALTNSLRARVV
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: KMVGTVQTVLVEGPSRKNPNELTGKTENMRSVNFPAPARLIGQFVDVVITEALTNSLRARV
type: DOMAIN
name: TRAM_dom
description: TRAM domain
Protein sequence:
MRFKEVGLLFCQLLAVLIFAAGFFPQKKVLKGDAQFQYMAETQRALEPAFDKLVLVVIDALRADFLFQQNVSHFDFVHELLNRGEAWGFTAYSNPPTVTLPRLKGITTGSAPNFLDAILNVAEDDSSSNLKDQDSWISQFAKHGKKIHFFGDDTWLKLFPEEFFQKHDGTNSFFVSDFEEVDTNVTRHLPHELQHKDWDVLILHYLGLDHIGHKGGAASQFMPPKHREMDAVIRQIYDQVDNRTLLCVMGDHGMNDLGNHGGSSAGETSAGMVFISKMLSSYPRPAAQDGVSSPVTAAEDYQFFTRIQQVDFVPTIASLFNIPIPKNSLGVFVREFSSLLGQHATTKIIENYHQLMQLAAKKTAARGNDDIDSMLAEMKDVQATLARTATNYNYAMLFLGVGMLSIVTAATAYCYISSARLNEASVLMIAVTALLGSSVFGSSFVEEEHQIWWWIIIAVVGYSWATRPSCTPSHLVFLVCARLLRGWNNSGQKFMYDFTVAELLKSHPSIKWLLVCATLAVVALDGFTERPLLSIFNLLAGLLCFVYKTCWANVNGEVSPTYAQTLVTKACSLLFAGGTPWDDKQLLVPLARLFFKVTAAIVCMRIAYNVVFAKRKFLSELFPLFTIVLIMQTASQNIPLFLVFTIMRSSLRNILRVGYPQQRCEMFFVLSLILQNLSFFQFGGTNSIATIDLTNSYNGISENYNIYVVGLLMCIGNMAPAIYWSLAAVVDHQLYSKKSYAQQKLSSMFFYSVNSLLLLVACICMRYHLFIWSVFSPKLCYLLGWNILIHFLTETVLEPFLLMVAG

Annotated regions:
phrase: PAFDKLVLVVIDALRADFLFQQNVSHFDFVHELLNRGEAWGFTAYSNPPTVTLPRLKGITTGSAPNFLDAILNVAEDDSSSNLKDQDSWISQFAKHGKKIHFFGDDTWLKLFPEEFFQKHDGTNSFFVSDFEEVDTNVTRHLPHELQHKDWDVLILHYLGLDHIGHKGGAASQFMPPKHREMDAVIRQIYDQVDNRTLLCVMGDHGMNDLGNHGGSSAGETSAGMVFISKMLSSYPRPAAQDGVSSPVTAAEDYQFFTRIQQVDFVPTIASLFNIPIPKNSLGVF
type: DOMAIN
name: PIG-G_N
description: GPI ethanolamine phosphate transferase 2, N-terminal

phrase: ATNYNYAMLFLGVGMLSIVTAATAYCYISSARLNEASVLMIAVTALLGSSVFGSSFVEEEHQIWWWIIIAVVGYSWATRPSCTPSHLVFLVCARLLRGWNNSGQKFMYDFTVAELLKSHPSIKWLLVCATLAVVALDGFTERPLLSIFNLLAGLLCFVYKTCWANVNGEVSPTYAQTLVTKACSLLFAGGTPWDDKQLLVPLARLFFKVTAAIVCMRIAYNVVFAKRKFLSELFPLFTIVLIMQTASQNIPLFLVFTIMRSSLRNILRVGYPQQRCEMFFVLSLILQNLSFFQFGGTNSIATIDLTNSYNGISENYNIYVVGLLMCIGNMAPAIYWSLAAVVDHQLYSKKSYAQQKLSSMFFYSVNSLLLLVACICMRYHLFIWSVFSPKLCYLLGWNILIHFLTETVLEPFLL
type: DOMAIN
name: PIGG/GPI7_C
description: GPI ethanolamine phosphate transferase 2, C-terminal
Protein sequence:
MTSVVVVGTQWGDEGKGKITDFLSADAEVIARYQGGDNAGHTIVIDGKKFKLHLIPSGIFFPQKISVIGNGVVVNPKSLVKELAYLHDEGVTTDNLRISDRAHVILPYHIQLDQLQEDAKGDNKIGTTIKGIGPAYMDKAARVGIRIADLLDKDIFAERLRINLAEKNRLFEKMYDSTPLDFDAIFEEYYAYGQEIKQYVTDTSVILNDALDAGKRVLFEGAQGVMLDIDQGTYPFVTSSNPVAGGVTIGSGVGPNKINKVVGVCKAYTSRVGDGPFPTELFDEVGERIREVGHEYGTTTGRPRRVGWFDSVVMRHSRRVSGITNLSLNSIDVLSGLDTVKICVAYDLDGKRIDYYPANLEQLKRCKPIYEELPGWQEDITGVRSLDELPENARNYVRRVGELVGVRISTFSVGPGREQTNILESVWASI

Annotated regions:
phrase: GIGPAYMDKAA
type: ACTIVE_SITE
name: Adenylosuccin_syn_Lys_AS
description: Adenylosuccinate synthase, active site

phrase: QWGDEGK
type: BINDING_SITE
name: Adenylosuccin_syn_GTP-bd
description: Adenylosuccinate synthase, GTP-binding site
Protein sequence:
MIKRLIVISILLIVGTVLCGCMEQENVGQQNSEAQEKIVLKIFHAGSLSVPFEEYEKMFEKEHPNVDVEREPAGSVACVRKIIDLGKKADILASADYSLIPQMMMPKYADWYVMFARNEIVLAYTDKSKYKDEINSTNWYKILQRPDVKIGFSNPNDDPCGYRTQMVLQLAELYYKDPTIYDNLVLKHSNIKVEENNGTYLILVPKELDVDTNKLFVRSKETDLLAPLEAGAFDYLFIYKSVANQHHLKYIELPKEINLGYYEYADTYKKVALKIIAKNKTINAKPIVYGMTVPTNAPHKKEAIEFVKFVLGHPEVLENNGQPAIIPAVAYGNVPEELKDLVKIEK

Annotated regions:
Protein sequence:
MKPILPDYSQSGVLIIGDVMLDRYWYGPTGRISPEAPVPVVKVEDNEERPGGAANVAMNIAALSGKATVIGLVGEDEPAQVLTNTLSSLKVNCQFVPLAEFPTITKLRVMSRGQQMIRLDFEDKFTGVDPELMLAQMETALPNVQSVVLSDYAKGALEHVQALIQKARAAGLPVFIDPKGADFERYRGATLLTPNMAEFELVVGKVEDEQQLVEKGLDLIERYDFEALLVTRSEHGMTLLRKGEEPFHLPTLAKEVFDVTGAGDTVISVLAASVAAGKPLDEACALANAAAGVVVGKLGTSTLSTIELAEAIHGSQDTDYGVITESALIEAVKKARSKGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNSDDSVKRLKGPGRPVNPTERRMAVLAGLGAVDWVVPFEEDTPQRLISEVLPSLLVKGGDYKPHEIAGGDEVIAAGGEVKVLNFEEGVSTTEIIKAIKGGKE

Annotated regions:
phrase: VKKARSKGEKVVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNSDDSVKRLKGPGRPVNPTERRMAVLAGLGAVDWVVPFEEDTPQRLISEVLPSLLVKGGDYKPHEIAGGDEVIAAGGEVKVLNFEEGVSTTEIIKAI
type: DOMAIN
name: RfaE_dom_II
description: RfaE bifunctional protein, domain II

phrase: DYSQSGVLIIGDVMLDRYWYGPTGRISPEAPVPVVKVEDNEERPGGAANVAMNIAALSGKATVIGLVGEDEPAQVLTNTLSSLKVNCQFVPLAEFPTITKLRVMSRGQQMIRLDFEDKFTGVDPELMLAQMETALPNVQSVVLSDYAKGALEHVQALIQKARAAGLPVFIDPKGADFERYRGATLLTPNMAEFELVVGKVEDEQQLVEKGLDLIERYDFEALLVTRSEHGMTLLRKGEEPFHLPTLAKEVFDVTGAGDTVISVLAASVAAGKPLDEACALANAAAGVVVGKLGTSTLSTIELAEA
type: DOMAIN
name: RfaE_dom_I
description: RfaE bifunctional protein, domain I

phrase: VVMTNGCFDILHAGHVSYLNHAAELGDRLIVAVNSDDSVKRLKGPGRPVNPTERRMAVLAGLGAVD
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: VLIIGDVMLDRYWYGPTGRISPEAPVPVVKVEDNEERPGGAANVAMNIAALSGKATVIGLVGEDEPAQVLTNTLSSLKVNCQFVPLAEFPTITKLRVMSRGQQMIRLDFEDKFTGVDPELMLAQMETALPNVQSVVLSDYAKGALEHVQALIQKARAAGLPVFIDPKGADFERYRGATLLTPNMAEFELVVGKVEDEQQLVEKGLDLIERYDFEALLVTRSEHGMTLLRKGEEPFHLPTLAKEVFDVTGAGDTVISVLAASVAAGKPLDEACALANAAAGVVVGKLGTS
type: DOMAIN
name: PfkB_dom
description: Carbohydrate kinase PfkB

phrase: VLIIGDVMLDRYWYGPTGRISPEAPVPVVKVEDNEERPGGAANVAMNIAALSGKATVIGLVGEDEPAQVLTNTLSSLKVNCQFVPLAEFPTITKLRVMSRGQQMIRLDFEDKFTGVDPELMLAQMETALPNVQSVVLSDYAKGALEHVQALIQKARAAGLPVFIDPKGADFERYRGATLLTPNMAEFELVVGKVEDEQQLVEKGLDLIERYDFEALLVTRSEHGMTLLRKGEEPFHLPTLAKEVFDVTGAGDTVISVLAASVAAGKPLDEACALANAAAGVVVGKLGTSTLSTIELA
type: DOMAIN
name: RfaE_dom_I
description: RfaE bifunctional protein, domain I

phrase: GGAANVAMNIAALSGKATVIGLV
type: CONSERVED_SITE
name: Carboh/pur_kinase_PfkB_CS
description: Carbohydrate/purine kinase, PfkB, conserved site

phrase: MTNGCFDILHAGHVSYLNHAAELGDRLIVAVNSDDSVKRLKGPGRPVNPTERRMAVLAGLGAVDWVVPFEEDTPQRLISEVLPSLLVKGGDYKPHEIAGGDEVIAAGGEVKVLNFEEGVSTTEII
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain
Protein sequence:
MQRSPLEKASVVSKLFFSWTRPILRKGYRQRLELSDIYQIPSVDSADNLSEKLEREWDRELASKKNPKLINALRRCFFWRFMFYGIFLYLGEVTKAVQPLLLGRIIASYDPDNKEERSIAIYLGIGLCLLFIVRTLLLHPAIFGLHHIGMQMRIAMFSLIYKKTLKLSSRVLDKISIGQLVSLLSNNLNKFDEGLALAHFVWIAPLQVALLMGLIWELLQASAFCGLGFLIVLALFQAGLGRMMMKYRDQRAGKISERLVITSEMIENIQSVKAYCWEEAMEKMIENLRQTELKLTRKAAYVRYFNSSAFFFSGFFVVFLSVLPYALIKGIILRKIFTTISFCIVLRMAVTRQFPWAVQTWYDSLGAINKIQDFLQKQEYKTLEYNLTTTEVVMENVTAFWEEGFGELFEKAKQNNNNRKTSNGDDSLFFSNFSLLGTPVLKDINFKIERGQLLAVAGSTGAGKTSLLMVIMGELEPSEGKIKHSGRISFCSQFSWIMPGTIKENIIFGVSYDEYRYRSVIKACQLEEDISKFAEKDNIVLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFGYLDVLTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQNLQPDFSSKLMGCDSFDQFSAERRNSILTETLHRFSLEGDAPVSWTETKKQSFKQTGEFGEKRKNSILNPINSIRKFSIVQKTPLQMNGIEEDSDEPLERRLSLVPDSEQGEAILPRISVISTGPTLQARRRQS

Annotated regions:
phrase: TTEVVMENVTAFWEEGFGELFEKAKQNNNNRKTSNGDDSLFFSNFSLLGTPVLKDINFKIERGQLLAVAGSTGAGKTSLLMVIMGELEPSEGKIKHSGRISFCSQFSWIMPGTIKENIIFGVSYDEYRYRSVIKACQLEEDISKFAEKDNIVLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFGYLDVLTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQNLQPDFSSKLMGCDSFDQFSAERRNSILTETLHRF
type: DOMAIN
name: CFTR1_ATP-bd_dom1
description: Cystic fibrosis transmembrane conductance regulator, ATP-binding cassette domain 1

phrase: RGQLLAVAGSTGAGKTSLLMVIMGELEPSEGKIKHSGRISFCSQFSWIMPGTIKENIIFGVSYDEYRYRSVIKACQLEEDISKFAEKDNIVLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFGYLDVLTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQNLQP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: DFSSKLMGCDSFDQFSAERRNSILTETLHRFSLEGDAPVSWTETKKQSFKQTGEFGEKRKNSILNPINSIRKFSIVQKTPLQMNGIEEDSDEPLERRLSLVPDSEQGEAILPRISVISTGPTLQARRRQ
type: DOMAIN
name: CFTR_reg_dom
description: CFTR regulator domain

phrase: MFYGIFLYLGEVTKAVQPLLLGRIIASYDPDNKEERSIAIYLGIGLCLLFIVRTLLLHPAIFGLHHIGMQMRIAMFSLIYKKTLKLSSRVLDKISIGQLVSLLSNNLNKFDEGLALAHFVWIAPLQVALLMGLIWELLQASAFCGLGFLIVLALFQAGLGRMMMKYRDQRAGKISERLVITSEMIENIQSVKAYCWEEAMEKMIENLRQTELKLTRKAAYVRYFNSSAFFFSGFFVVFLSVLPYALIKGIILRKIFTTISFCIVLRMA
type: DOMAIN
name: ABC1_TM_dom
description: ABC transporter type 1, transmembrane domain

phrase: NGDDSLFFSNFSLLGTPVLKDINFKIERGQLLAVAGSTGAGKTSLLMVIMGELEPSEGKIKHSGRISFCSQFSWIMPGTIKENIIFGVSYDEYRYRSVIKACQLEEDISKFAEKDNIVLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFGYLDVLTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQNLQPDFSSKLM
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: LSGGQRARISLARA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: LKDINFKIERGQLLAVAGSTGAGKTSLLMVIMGELEPSEGKIKHSGRISFCSQFSWIMPGTIKENIIFGVSYDEYRYRSVIKACQLEEDISKFAEKDNIVLGEGGITLSGGQRARISLARAVYKDADLYLLDSP
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: IFLYLGEVTKAVQPLLLGRIIASYDPDNKEERSIAIYLGIGLCLLFIVRTLLLHPAIFGLHHIGMQMRIAMFSLIYKKTLKLSSRVLDKISIGQLVSLLSNNLNKFDEGLALAHFVWIAPLQVALLMGLIWELLQASAFCGLGFLIVLALFQAGLGRMMMKYRDQRAGKISERLVITSEMIENIQSVKAYCWEEAMEKMIENLRQTELKLTRKAAYVRYFNSSAFFFSGFFVVFLSV
type: DOMAIN
name: ABC1_TM_dom
description: ABC transporter type 1, transmembrane domain
Protein sequence:
MPNLQQTASQSQHHLHPHHLRPQQQQQQHHHHHQQQQQQQHTHHQQQQQHHSDFPLPDGWDIAKDFDGKTYYIDHINKKTTWLDPRDCYTKPQTFEDCVGDELPMGWEESYDPNIGPYYINHLAQSTQLEDPRQEWKTVQEQMLSDYLSAAQDQLENKREMFDVKQQRLLWAQEEYNHLKLAASRSSLCSSSSSMSRHDPELLRADLMLARERVHQLKQELTHITNDISYTERGMNTLYSVGEKINARENGCYDIAEVHAIREEMLKVHKSLVSGEKVREELMRSLVQIKNELGRQQISEENSDLASPFDRVCVASQTDLCGSSGENLNGGARFAEMAKTKWQYAEWRKHIKKLQQQLADHVERIEPGQLESDKDRILLIQEKEKLLNDLNSISLKSRSEEEKRVIHQTRHKLEEDLKEAYEANNTCVANRLRFHEEKQLLLDKLQEALKSTKLLEERLKSFSSESTFSISSGSSLGSLSTASSKSALSFTDIYIDPFAVDSPIDVVDLRRRSQRLFQQHQQQRLHPVHPVLQQQQSAEVTLSPRSSLSMETPPASPMKYNAGADQTPQALKEEPTYANALPAPPAYTAPPPVPISGVRARPYDLDSTVLDCMMLEAKLQKLNMGTPLNLAVAPLSPISEKPSLLDLPQEMLSRSSSTSNTRSVSAAVSNESVAGDSGVFEASRAHLPRKELAQVQIGLKYLKQEGVLVVSLERANNLLALWTASADNSQVYLRAALLPNSLTSIRTKALGDFQKPVFNDTFAVPITLDKLLTKSLQVTVVTMTGQKEEIIGTVQISMAEFNPEDSTLKWYNVLSSKFIPSFESLDIPSTSAAAAAAAVAASNAPNPGNNREESSDESTITSSQTSTLTRNQAPCMELQEQMAAELLGLGPLNEPECSDDDDDDEEEELDDKQLVSDVGLMNSSSMLHAYLQNMKQEFADKETNTDRAYLPEKSRGQSQLMDDRPVKRSQTFTPSEAFSKNRYNCRLNRSDSDSAMHCGVAPHTFQRGAAERRSLRFHSKAPKSVTKLHHTHIPRTSLDLELDLQAQHSKLYFLNDQIAKLQNLKEVLQKACENKDPLVAAWAIENEEFQRLVARADPAKCPEERQLQKLLMKTAKEIHKLRKTKVPKGCPDLVSFKEKITFFTRKGLSVPELPSEFTLPEANPIEEEEEEEDENEFYNSAETAIAINTALVASSNRNKNLSEHPHRATSGAVPKIPAPVVTPAATPAATPAATPAATSAATPAATPVVSPAAQPDAKPADAPIPVASNDAEQQRFDYVVDRNYGVEV

Annotated regions:
phrase: FPLPDGWDIAKDFDGKTYYIDHINKKTTWLDPR
type: DOMAIN
name: WW_dom
description: WW domain

phrase: VLVVSLERANNLLALWTASADNSQVYLRAALLPNSLTSIRTKALGDFQKPVFNDTFAVPITLDKLLTKSLQVTVVTMTGQKEEIIGTVQISMAEFNPEDSTLKWY
type: DOMAIN
name: C2_dom
description: C2 domain

phrase: DELPMGWEESYDPNIGPYYINHLAQSTQLEDPR
type: DOMAIN
name: WW_dom
description: WW domain

phrase: LPDGWDIAKDFDGKTYYIDHINKKTTWLD
type: DOMAIN
name: WW_dom
description: WW domain

phrase: LPMGWEESYDPNIGPYYINHLAQSTQLED
type: DOMAIN
name: WW_dom
description: WW domain

phrase: VLVVSLERANNLLALWTASADNSQVYLRAALLPNSLTSIRTKALGDFQKPVFNDTFAVPITLDKLLTKSLQVTVVTMTGQKEEIIGTVQISMAEFNPEDSTLK
type: DOMAIN
name: C2_dom
description: C2 domain

phrase: PDGWDIAKDFDGKTYYIDHINKKTTWLDPR
type: DOMAIN
name: WW_dom
description: WW domain

phrase: ELAQVQIGLKYLKQEGVLVVSLERANNLLALWTASADNSQVYLRAALLPNSLTSIRTKALGDFQKPVFNDTFAVPITLDKLLTKSLQVTVVTMTGQKEEIIGTVQISMAEFNPEDSTLKW
type: DOMAIN
name: C2_dom
description: C2 domain

phrase: AQVQIGLKYLKQEGVLVVSLERANNLLALWTASADNSQVYLRAALLPNSLTSIRTKALGDFQKPVFNDTFAVPITLDKLLTKSLQVTVVTMTGQKEEIIGTVQISMAEFNPEDSTLKWYN
type: DOMAIN
name: C2_WWC
description: WWC, C2 domain

phrase: GWEESYDPNIGPYYINHLAQSTQLEDP
type: DOMAIN
name: WW_dom
description: WW domain

phrase: WDIAKDFDGKTYYIDHINKKTTWLD
type: DOMAIN
name: WW_dom
description: WW domain

phrase: ELPMGWEESYDPNIGPYYINHLAQSTQLEDPR
type: DOMAIN
name: WW_dom
description: WW domain

phrase: PLPDGWDIAKDFDGKTYYIDHINKKTTWLDPR
type: DOMAIN
name: WW_dom
description: WW domain
Protein sequence:
MNQPLQHTTVLLDEAVHALLGDGDAPAGTFVDGTFGRGGHSRLILQRLGPQGRLVAFDKDTEAIQAAARITDARFSIRHQGFSHLGELPAASVSGVLLDLGVSSPQIDDPQRGFSFRFDGPLDMRMDTTRGQSVAEWLADAEAAQIAEVIRDYGEERFAGPIAKAIVARRTERGPISSTAELADIVAGAVKTREPGQNPATRTFQALRIFINAELEELQQALEGSLRVLRPGGRLVVISFHSLEDRIVKQFIAQHSKEVYDRRAPFAPPQPMRLKALERIKPSTDEVAANARARSAVMRVAERTEVPA

Annotated regions:
Protein sequence:
MNEKNSDEINYDFKVDSNLNHTTSHLLAAAIVQLYPNVKLGFGPAIEEGFYYDFEFENPLSKLELLKIEKLMKKLASMNLKMVKVDGSNYDFTNKPYKKELYDELKQKGQEITFYSLVDTNGKEIFTDLCAGGHVESTSKINNFKLLSLAGAYWRGNSNNIQLTRIYGSSFYKKDELENYLKVIEDRKERDHRKIGKNLGIFTFSSLSGLGFPIWLKKGMLIKRAIEKEILYLDRKYGFEEVLSPHFGEESLYIKSGHLAHYQETMFKSLEVENEKLIPRPMTCPHHIIIYDAFPRSYRELPLRLSEQSRLYRYEKSGALTGLERVRTMDLTEGHIFIRQDQIKDEVLNMINLIQETLKIFKIKIDHVALSLRDNDKEKFFDDDQMWDQAESALKEILDQNKIDYIVEKGEAAFYGPKIDFQVKTVLNNIITMSTIQLDFLLPRKFNISYIAPDGSKQTPLMIHRGLIGTYERFVSILLEQTKGNFPFWLSPSQVIVLPIAKEFKEYAFEIYSKIFKQNFNVEIDNRDETINKKIREAQINKYKYQIIIGKQEMENKTIAIREYGKVQTITMDLESFIEKIKSQRDSKE

Annotated regions:
phrase: VENEKLIPRPMTCPHHIIIYDAFPRSYRELPLRLSEQSRLYRYEKSGALTGLERVRTMDLTEGHIFIRQDQIKDEVLNMINLIQETLKIFKIKIDHVALSLRDNDKEKFFDDDQMWDQAESALKEILDQNKIDYIVEKGEAAFYGPKIDFQVKTVLNNIITMSTIQLDFLLPRKFNISYIAPDGSKQTPLMIHRGLIGTYERFVSILLE
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: GMLIKRAIEKEILYLDRKYGFEEVLSPHFGEESLYIKSGHLAHYQETMFKSLEVENEKLIPRPMTCPHHIIIYDAFPRSYRELPLRLSEQSRLYRYEKSGALTGLERVRTMDLTEGHIFIRQDQIKDEVLNMINLIQETLKIFKIKIDHVALSLRDNDKEKFFDDDQMWDQAESALKEILDQNKIDYIVEKGEAAFYGPKIDFQVKTVLNNIITMSTIQLDFLLPRKFNISYIAPDGSKQTPLMIHRGLIGTYERFVSILLEQTKGNF
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: PSQVIVLPIAKEFKEYAFEIYSKIFKQNFNVEIDNRDETINKKIREAQINKYKYQIIIGKQEMENKTIAIREYGKVQTITMDLESFIEKI
type: DOMAIN
name: ThrRS_anticodon
description: Threonine-tRNA ligase, class IIa, anticodon-binding domain

phrase: ITFYSLVDTNGKEIFTDLCAGGHVESTSKINNFKLLSLAGAYWRGNSNNIQLTRI
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD

phrase: EIFTDLCAGGHVESTSKINNFKLLSLAGAYWRGNSNNIQLTRI
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD

phrase: QVIVLPIAKEFKEYAFEIYSKIFKQNFNVEIDNRDETINKKIREAQINKYKYQIIIGKQEMENKTIAIREYGKVQTITMDLESFIEKIK
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: DHRKIGKNLGIFTFSSLSGLGFPIWLKKGMLIKRAIEKEILYLDRKYGFEEVLSPHFGEESLYIKSGHLAHYQETMFKSLEVENEKLIPRPMTCPHHIIIYDAFPRSYRELPLRLSEQSRLYRYEKSGALTGLERVRTMDLTEGHIFIRQDQIKDEVLNMINLIQETLKIFKIKIDHVALSLRDNDKEKFFDDDQMWDQAESALKEILDQNKIDYIVEKGEAAFYGPKIDFQVKTVLNNIITMSTIQLDFLLPRKFNISYIAPDGSKQTPLMIHRGLIGTYERFVSILLEQTKGNFPFWLS
type: DOMAIN
name: ThrRS_core
description: Threonine-tRNA ligase catalytic core domain
Protein sequence:
MSLIDKMLYSLTLSQLNEILMAHGFKKYVSEQVFKWLYRQCNFEITSWSNISLAAKNFLQENFSIALPQILRVDHSSDGTKKFLLSLADGEQVETVYIPFNEERHTICVSSQVGCPMGCIFCLTGQMGFKRNLFAGEIIAQYLAVTFWMRTNVASDFKLTNMVFMGQGEPLLNFDNVKSAIEILVDSRGIALGQRKITLSTSGWVPQIKKLNDFPPVNIAISLHAVDDVVRSKLMPINNRYDIHALFDAIKEVHLKAHRRITYEYLLIEDVNDRPEDIDGLTQLISKRDSKINIIPFNDYPESPFRRPTDAKIIWFQEELLKRGLVTTIRASKGKDILAACGQLKNEFSKS

Annotated regions:
phrase: LYSLTLSQLNEILMAHGFKKYVSEQVFKWLYRQCNFEITSWSNISLAAKNFLQENFS
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: SSQVGCPMGCIFCLTGQMGFKRNLFAGEIIAQYLAVTFWMRTNVASDFKLTNMVFMGQGEPLLNFDNVKSAIEILVDSRGIALGQRKITLSTSGWVPQIKKLNDFPPVNIAISLHAVDDVVRSKLMPINNRYDIHALFDAIKEVHLKAHRRITYEYLLIEDVNDRPE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: NEERHTICVSSQVGCPMGCIFCLTGQMGFKRNLFAGEIIAQYLAVTFWMRTNVASDFKLTNMVFMGQGEPLLNFDNVKSAIEILVDSRGIALGQRKITLSTSGWVPQIKKLNDFPPVNIAISLHAVDDVVRSKLMPINNRYDIHALFDAIKEVHLKAHRRITYEYLLIEDVNDRPEDIDGLTQLISKRDSKINIIPFNDYPESPFRRPTDAKIIWFQEELLKRGLVTTIRASKGK
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MKLIIGIGGVTNGGKTTLTNSLLKALPNCCVIHQDDFFKPQDQIAVGEDGFKQWDVLESLDMETMLSTVQAWVKDPHKFARAHGVSLQSGASDTHVLLLEGFLLYSYRPLVDLYSQRYFLTVPYEECKRRRRSRTYMVPDPPGLFDGHVWPMYQKYRREMEQDGVEVVYLDGMKSPEGLFHQVLEDIQNRLLNTS

Annotated regions: