nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MQTIYDLTLHQLEELVLELGQKKYRAKQLFTWLYRKRVLSFEEMTDLPTSFIEELKSHFIIMPVKEVMRQVSKDGTRKYLFSLEDGSSIETVLMHFNFGESLCVTSQLGCNMGCTFCASGLLKKQRDLSQGEILGQLMYVQKELDSENLRISNIVVMGTGEPFDNYDHVLGFCKTANQDIGLGIGARHITISTCGIVPKIREFSKSHYQYNLAISLHAPNQELRDKLMPINHRYPLSELMDSLKEYSESNHRRITFEYILLHGVNDSDQHAIELAHLIRGMNAYVNLIPYNKVDEKGYESTDDKTALHFYDVLMKHGVKATLRQKHGDDIDAACGQLRAKHEKGRIRV

Annotated regions:
phrase: FNFGESLCVTSQLGCNMGCTFCASGLLKKQRDLSQGEILGQLMYVQKELDSENLRISNIVVMGTGEPFDNYDHVLGFCKTANQDIGLGIGARHITISTCGIVPKIREFSKSHYQYNLAISLHAPNQELRDKLMPINHRYPLSELMDSLKEYSESNHRRITFEYILLHGVNDSDQHAIELAHLIRGMNAYVNLIPYNKVDEKGYESTDDKTALHFYDVLMKHGVKATL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: IYDLTLHQLEELVLELGQKKYRAKQLFTWLYRKRVLSFEEMTDLPTSFIEELKSHFI
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: QLGCNMGCTFCASGLLKKQRDLSQGEILGQLMYVQKELDSENLRISNIVVMGTGEPFDNYDHVLGFCKTANQDIGLGIGARHITISTCGIVPKIREFSKSHYQYNLAISLHAPNQELRDKLMPINHRYPLSELMDSLKEYSESNHRRITFEYILLHGVNDSDQHAIE
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MRVLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVKVFHRICPELQNASRTPSGTLVRVQLLGQFPQWLAENAARAVELGSWGVDLNCGCPSKTVNGSGGGATLLKDPELIYQGAKAMREAVPAHLPVSVKVRLGWDSGEKKFEIADAVQQAGATELVVHGRTKEQGYRAEHIDWQAIGDIRQRLNIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIPNLSRVVKYNEPRMPWPEVVALLQKYTRLEKQGDTGLYHVARIKQWLSYLRKEYDEATELFQHVRVLNNSPDIARAIQAIDIEKL

Annotated regions:
phrase: VDLNCGCPSKTVNGSGGG
type: CONSERVED_SITE
name: tRNA_hU_synthase_CS
description: tRNA-dihydrouridine synthase, conserved site

phrase: LLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVKVFHRICPELQNASRTPSGTLVRVQLLGQFPQWLAENAARAVELGSWGVDLNCGCPSKTVNGSGGGATLLKDPELIYQGAKAMREAVPAHLPVSVKVRLGWDSGEKKFEIADAVQQAGATELVVHGRTKEQGYRAEHIDWQAIGDIRQRLNIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIPNLSRVVKYNEPRMPWPEVVALLQKYTRLEKQGDTGLYHVARIKQWLSYLRKEYDEATELFQHVRVLNNSPDIARA
type: DOMAIN
name: DUS-like_FMN-bd
description: DUS-like, FMN-binding domain

phrase: RVLLAPMEGVLDSLVRELLTEVNDYDLCITEFVRVVDQLLPVKVFHRICPELQNASRTPSGTLVRVQLLGQFPQWLAENAARAVELGSWGVDLNCGCPSKTVNGSGGGATLLKDPELIYQGAKAMREAVPAHLPVSVKVRLGWDSGEKKFEIADAVQQAGATELVVHGRTKEQGYRAEHIDWQAIGDIRQRLNIPVIANGEIWDWQSAQQCMAISGCDAVMIGRGALNIPNLSRVVKYN
type: DOMAIN
name: DUS-like_FMN-bd
description: DUS-like, FMN-binding domain
Protein sequence:
MKLLHVDSSILGTYSVSRQLSAEIVAEWRKSRPDTTVEYLDLALNAPNHFGADAIAIKGIAQPEPTEAQRAENALSEQLVSQFLASDVIVIGAPFYNFSIPTQLKAWIDRLAQPGRTFTYNEKGPLGLATGKTVIVASTRGGAYSTSEGGQAMEHQESYLKVVFGFFGITDVRIVRAEGLAMGDAPKAAALSAARADMELATA

Annotated regions:
phrase: MKLLHVDSSILGTYSVSRQLSAEIVAEWRKSRPDTTVEYLDLALNAPNHFGADAIAIKGIAQPEPTEAQRAENALSEQLVSQFLASDVIVIGAPFYNFSIPTQLKAWIDRLAQPGRTFTYNEKGPLGLATGKTVIVASTRGGAYSTSEGGQAMEHQESYLKVVFGFFGITDVRIVRAEGLAMGDAPKAAALSAARAD
type: DOMAIN
name: Flavodoxin_fold
description: Flavodoxin-like fold
Protein sequence:
MVKLAKGAKTQAKPKKAAPPPPKDMEDSEEEEDMEEDDSSDEEVEVPVKKTPAKKTATPAKATPGKAATPGKKGATPAKNGKQAKKQESEEEEDDSDEEAEDQKPIKNKPVAKKAVAKKEESEEDDDDEDESEEEKAVAKKPTPAKKPAGKKQESEEEDDEESEDEPMEVAPALKGKKTAQAAEEDDEEEDDDDEEDDDDEEEQQGSAKRKKEMPKTIPEAKKTKTDTASEGLSIFIGNLNSTKEFDELKDALREFFSKKNLTIQDIRIGNSKKFGYVDFSSEEEVEKALKLTGKKILGTEVKIEKAMAFDKNKTAENKKERDSRTLFVKNIPYSTTVEELQEIFENAKDIRIPTGKDGSNKGIAYVEFSNEDEANKALEEKQGAEIEGRSIFVDFTGEKSQNSGNKKGPEGDSKVLVVNNLSYSATEDSLREVFEKATSIRIPQNQGRAKGFAFIEFSSAEDAKDAMDSCNNTEIEGRSIRLEFSQGGGPQGGGRGGSAQSKTLFVRGLSEDTTEETLKEAFDGSVNARIVTDRDTGASKGFGFVDFSTAEDAKAAKEAMEDGEIDGNKVTLDFAKPKGDSQRGGRGGFGRGGGFRGGRGGRGGGGGRGFGGRGGGRGRGGFGGRGGGGFRGGQGGGFRGGQGKKMRFDD

Annotated regions:
phrase: LSIFIGNLNSTKEFDELKDALREFFSKKNLTIQDIRIGNSKKFGYVDFSSEEEVEKALKLTGKKILGTEVKIEKAM
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: LSIFIGNLNSTKEFDELKDALREFFSKKNLTIQDIRIGNSKKFGYVDFSSEEEVEKALKLTGKKILGTEVKIEK
type: DOMAIN
name: Nucleolin_RRM1
description: Nucleolin, RNA recognition motif 1

phrase: SKVLVVNNLSYSATEDSLREVFEKATSIRIPQNQGRAKGFAFIEFSSAEDAKDAMDSCNNTEIEGRSIRLE
type: DOMAIN
name: Nucleolin_RRM3
description: Nucleolin, RNA recognition motif 3

phrase: TLFVKNIPYSTTVEELQEIFENAKDIRIPTGKDGSNKGIAYVEFSNEDEANKALEEKQGAEIEGRSIFV
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: TLFVRGLSEDTTEETLKEAFDGSVNARIVTDRDTGASKGFGFVDFSTAEDAKAAKEAMEDGEIDGNKVTL
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: VLVVNNLSYSATEDSLREVFEKATSIRIPQNQGRAKGFAFIEFSSAEDAKDAMDSCNNTEIEGRSIRL
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: SIFIGNLNSTKEFDELKDALREFFSKKNLTIQDIRIGNSKKFGYVDFSSEEEVEKALKLTGKKILGTEVKI
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: RTLFVKNIPYSTTVEELQEIFENAKDIRIPTGKDGSNKGIAYVEFSNEDEANKALEEKQGAEIEGRSIFVDFTG
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: KVLVVNNLSYSATEDSLREVFEKATSIRIPQNQGRAKGFAFIEFSSAEDAKDAMDSCNNTEIEGRSIRLEFSQ
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: RDSRTLFVKNIPYSTTVEELQEIFENAKDIRIPTGKDGSNKGIAYVEFSNEDEANKALEEKQGAEIEGRSIFVDFT
type: DOMAIN
name: Nucleolin_RRM2
description: Nucleolin, RNA recognition motif 2

phrase: LVVNNLSYSATEDSLREVFEKATSIRIPQNQGRAKGFAFIEFSSAEDAKDAMDSCNNTEIEGRSI
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: LFVRGLSEDTTEETLKEAFDGSVNARIVTDRDTGASKGFGFVDFSTAEDAKAAKEAMEDGEIDGNK
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: LFVKNIPYSTTVEELQEIFENAKDIRIPTGKDGSNKGIAYVEFSNEDEANKALEEKQGAEIEGRS
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: IFIGNLNSTKEFDELKDALREFFSKKNLTIQDIRIGNSKKFGYVDFSSEEEVEKALKLTGKKILGTE
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain

phrase: KTLFVRGLSEDTTEETLKEAFDGSVNARIVTDRDTGASKGFGFVDFSTAEDAKAAKEAMEDGEIDGNKVTLDFAKPK
type: DOMAIN
name: Nucleolin_RRM4
description: Nucleolin, RNA recognition motif 4

phrase: KTLFVRGLSEDTTEETLKEAFDGSVNARIVTDRDTGASKGFGFVDFSTAEDAKAAKEAMEDGEIDGNKVTLDFAK
type: DOMAIN
name: RRM_dom
description: RNA recognition motif domain
Protein sequence:
MTRALCSALRQALLLLAAAAELSPGLKCVCLLCDSSNFTCQTEGACWASVMLTNGKEQVIKSCVSLPELNAQVFCHSSNNVTKTECCFTDFCNNITLHLPTASPNAPKLGPMELAIIITVPVCLLSIAAMLTVWACQGRQCSYRKKKRPNVEEPLSECNLVNAGKTLKDLIYDVTASGSGSGLPLLVQRTIARTIVLQEIVGKGRFGEVWHGRWCGEDVAVKIFSSRDERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSEYHEQGSLYDYLNRNIVTVAGMIKLALSIASGLAHLHMEIVGTQGKPAIAHRDIKSKNILVKKCETCAIADLGLAVKHDSILNTIDIPQNPKVGTKRYMAPEMLDDTMNVNIFESFKRADIYSVGLVYWEIARRCSVGGIVEEYQLPYYDMVPSDPSIEEMRKVVCDQKFRPSIPNQWQSCEALRVMGRIMRECWYANGAARLTALRIKKTISQLCVKEDCKA

Annotated regions:
phrase: KTLKDLIYDVTASGSGSGLPLLVQRTIART
type: DOMAIN
name: GS_dom
description: GS domain

phrase: TLKDLIYDVTASGSGSGLPLLVQRTIA
type: DOMAIN
name: GS_dom
description: GS domain

phrase: VGKGRFGEVWHGRWCGEDVAV
type: BINDING_SITE
name: Protein_kinase_ATP_BS
description: Protein kinase, ATP binding site

phrase: LKCVCLLCDSSNFTCQTEGACWASVMLTNGKEQVIKSCVSLPELNAQVFCHSSNNVTKTECCFTDFCNN
type: DOMAIN
name: Activin_recp
description: Activin types I and II receptor domain

phrase: IAHRDIKSKNIL
type: ACTIVE_SITE
name: Ser/Thr_kinase_AS
description: Serine/threonine-protein kinase, active site

phrase: IVLQEIVGKGRFGEVWHGRWCGEDVAVKIFSSRDERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSEYHEQGSLYDYLNRNIVTVAGMIKLALSIASGLAHLHMEIVGTQGKPAIAHRDIKSKNILVKKCETCAIADLGLAVKHDSILNTIDIPQNPKVGTKRYMAPEMLDDTMNVNIFESFKRADIYSVGLVYWEIARRCSVGGIVEEYQLPYYDMVPSDPSIEEMRKVVCDQKFRPSIPNQWQSCEALRVMGRIMRECWYANGAARLTALRIKKTISQ
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: IVLQEIVGKGRFGEVWHGRWCGEDVAVKIFSSRDERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSEYHEQGSLYDYLNRNIVTVAGMIKLALSIASGLAHLHMEIVGTQGKPAIAHRDIKSKNILVKKCETCAIADLGLAVKHDSILNTIDIPQNPKVGTKRYMAPEMLDDTMNVNIFESFKRADIYSVGLVYWEIARRCSVGGIVEEYQLPYYDMVPSDPSIEEMRKVVCDQKFRPSIPNQWQSCEALRVMGR
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: KTLKDLIYDVTASGSGSGLPLLVQRTIAR
type: DOMAIN
name: GS_dom
description: GS domain

phrase: VLQEIVGKGRFGEVWHGRWCGEDVAVKIFSSRDERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSEYHEQGSLYDYLNRNIVTVAGMIKLALSIASGLAHLHMEIVGTQGKPAIAHRDIKSKNILVKKCETCAIADLGLAVKHDSILNTIDIPQNPKVGTKRYMAPEMLDDTMNVNIFESFKRADIYSVGLVYWEIARRCSVGGIVEEYQLPYYDMVPSDPSIEEMRKVVCDQKFRPSIPNQWQSCEALRVMGRIMRECWYANGAARLTALRIK
type: DOMAIN
name: Ser-Thr/Tyr_kinase_cat_dom
description: Serine-threonine/tyrosine-protein kinase, catalytic domain
Protein sequence:
MAQTIKRGGKGVRRATAARSAQRKVQTARQQTGSVLDSVLRWLPFSEETLHRILMTLILAAAAGLVWTVAVMAGIPALVSEQAAIIASDAGFKVSHLEVRGVNRMNEAKIYERILGQNDRAMTTLDLAALRDELNQLPWVKDARVSRKLPDTLVIDIVERTPHAVLRKPDRMVLIDDTGVELESVRADRAKGMLVLSGMGVGQRVEDLTRLLDAAPALKPQVSEAEWVGNRRWNLTFKTGQVLALPEGDETAASALLSFARMDGVNRLLGGKVAAFDMRAPDRIYMRVPGHADEVAAEKRAEEQARAEAKRAASAKSDEG

Annotated regions:
phrase: VLRKPDRMVLIDDTGVELESVRADRAKGMLVLSGMGVGQRVEDLTRLLDAAPALKPQVSEAEWVGNRRWNLTFKTGQVLALPEGDETAASALLSFARMDGVNRLLGGKVAAFDM
type: DOMAIN
name: Cell_div_FtsQ/DivIB_C
description: Cell division protein FtsQ/DivIB, C-terminal

phrase: FKVSHLEVRGVNRMNEAKIYERILGQNDRAMTTLDLAALRDELNQLPWVKDARVSRKLPDTLVIDIVE
type: DOMAIN
name: POTRA
description: POTRA domain

phrase: FKVSHLEVRGVNRMNEAKIYERILGQNDRAMTTLDLAALRDELNQLPWVKDARVSRKLPDTLVIDIVE
type: DOMAIN
name: POTRA_FtsQ_type
description: POTRA domain, FtsQ-type
Protein sequence:
MKKRIAIVLFNLGGPKNLKSVKPFLFNLFYDKAIINLPNPLRYIIAKIISITREKKSQKIYSLIGGKSSLLQETEEQKLALTEKLKQLIKEDFAIFINMRYSAPFAKEVIGQIKKYNPSEIILLPLYSQFSSTTTGSSVKNFLQNLDIDIPIKTICCYPLEKDFIKAHVSLIKEKLYDKNFRILFSAHGLPEKIIKAGDPYSFQIKETVQAIVKELNIKDLDYKITYQSRVGPIEWLKPNTEDEIELAGKLKKDIIIVPISFVSEHVETLVELDIEYKLIADKYEIQYIRIPTLGTNKIFINSLTNILLRFINKVDTNLVMSSSSTRICPNEFTKCLCKLTS

Annotated regions:
phrase: KAHVSLIKEKLYDKNFRILFSAHGLPEKIIKAGDPYSFQIKETVQAIVKELNIKDLDYKITYQSRVGPIEWLKPNTEDEIELAGKLKKDIIIVPISFVSEHVETLVELDIEYKLIADKYEIQYIRIPTL
type: DOMAIN
name: Ferrochelatase_C
description: Ferrochelatase, C-terminal

phrase: ILFSAHGLPEKIIKAGDP
type: ACTIVE_SITE
name: Ferrochelatase_AS
description: Ferrochelatase, active site

phrase: IAIVLFNLGGPKNLKSVKPFLFNLFYDKAIINLPNPLRYIIAKIISITREKKSQKIYSLIGGKSSLLQETEEQKLALTEKLKQLIKEDFAIFINMRYSAPFAKEVIGQIKKYNPSEIILLPLYSQFSSTTTGSSVKNFLQNLDIDIPIKTICCY
type: DOMAIN
name: Ferrochelatase_N
description: Ferrochelatase, N-terminal
Protein sequence:
MEKQYLTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKYHSRGHMYFTLKDENARIAAVMFAGHNRNIKFRPENGMKVLVKGKISVYEASGSYQIYIQDMQPDGIGNLHLAYEQLKVRLEEEGLFSQVYKKIIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESAAPSIVQAIRTANEMGDIDVLIVGRGGGSIEELWAFNEEVVAREIFTSEIPIISAVGHETDFTIADFVADLRAPTPTAAAELAVPNTIELQEKVLQRTLRLQRAMRERVHKKEEKLQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQKIIQTKTAIETLQKQLQREMQTLLQTKEFVFVRAAQKLEVLSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDAVSVQLQDGILDCSVSSIEERELNNGK

Annotated regions:
phrase: LTVTALTRYIKTKIEYDPHLQSVWLKGEISNFKYHSRGHMYFTLKDENARIAAVMFAGHNRNIKFRPENGMKVLVKGKISVYEASGSYQIYIQDM
type: DOMAIN
name: OB-fold_nuc-bd_dom
description: OB-fold nucleic acid binding domain

phrase: SVWLKGEISNFKYHSRGHMYFTLKDENARIAAVMFAGHNRNIKFRPENGMKVLVKGKISVYEASGSYQIYIQDMQPD
type: DOMAIN
name: OB-fold_nuc-bd_dom
description: OB-fold nucleic acid binding domain

phrase: LFSQVYKKIIPPYAKTIGVITSPTGAAIRDIITTIKRRYPIGNVIVFPVLVQGESAAPSIVQAIRTANEMGDIDVLIVGRGGGSIEELWAFNEEVVAREIFTSEIPIISAVGHETDFTIADFVADLRAPTPTAAAELAVPNTIELQEKVLQRTLRLQRAMRERVHKKEEKLQVLQKSYAFRYPRQVYEQKEEQLDRALEQLVLAKERYIDKKVNQLKQLSFYLEKHHPSQKIIQTKTAIETLQKQLQREMQTLLQTKEFVFVRAAQKLEVLSPLKVMMRGYGLVYDEEKQVLKSVKDVSLGDAVSVQLQDGILD
type: DOMAIN
name: Exonuc_VII_lsu_C
description: Exonuclease VII, large subunit, C-terminal
Protein sequence:
MVIRTFAANLKSMNIEKKVLLGMSLEELKAAVKELGMPQFTAAQIAKWLYQQHVRSIDDMTNISKANRERLSEQYAVGTMDPIDCQRSKDGTIKYLFPVGDASKFVETVYIPDGDRATLCVSCQVGCKMNCLFCQTGKQGFEGSLTAGDILNQIYALPERETLTNIVFMGQGEPMDNLDNVLRATEVLTQDWGYAWSPRRITVSSVGVKGKLKRFLDESECHVAISMHSPLPEQRQRLMPAERQMSITEVVDLLKQYDFTHQRRCSFEYICFAGLNDTTTHAREIVKLLQGLECRVNLIRFHEIPDVDLPGADEKRMEALRDYLTKHGVFTTIRASRGQDIFAACGLLSTAAKGGLKEK

Annotated regions:
phrase: LLGMSLEELKAAVKELGMPQFTAAQIAKWLYQQHVRSIDDMTNISKANRERLSEQ
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: SCQVGCKMNCLFCQTGKQGFEGSLTAGDILNQIYALPERETLTNIVFMGQGEPMDNLDNVLRATEVLTQDWGYAWSPRRITVSSVGVKGKLKRFLDESECHVAISMHSPLPEQRQRLMPAERQMSITEVVDLLKQYDFTHQRRCSFEYICFAGLND
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: DGDRATLCVSCQVGCKMNCLFCQTGKQGFEGSLTAGDILNQIYALPERETLTNIVFMGQGEPMDNLDNVLRATEVLTQDWGYAWSPRRITVSSVGVKGKLKRFLDESECHVAISMHSPLPEQRQRLMPAERQMSITEVVDLLKQYDFTHQRRCSFEYICFAGLNDTTTHAREIVKLLQGLECRVNLIRFHEIPDVDLPGADEKRMEALRDYLTKHGVFTTIRASRGQ
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MAYPFQLGLQDATSPIMEELTNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPALTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNDLKPGDLRLLEVDNRIVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVSSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKTFENWSTSMI

Annotated regions:
phrase: PALTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNDLKPGDLRLLEVDNRIVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVSSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKTFEN
type: DOMAIN
name: CcO_II_C
description: Cytochrome c oxidase subunit 2, C-terminal

phrase: VLHSWAVPSLGLKTDAIPGRLNQATVSSNRPGLFYGQCSEICGSNHSF
type: BINDING_SITE
name: Copper_CuA
description: Copper centre Cu(A)

phrase: MAYPFQLGLQDATSPIMEELTNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEI
type: DOMAIN
name: Cyt_c_oxidase_su2_TM_dom
description: Cytochrome C oxidase subunit II, transmembrane domain

phrase: LTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNDLKPGDLRLLEVDNRIVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVSSNRPGLFYGQCSEICGSNHSFMPIVLEM
type: DOMAIN
name: CcO_II-like_C
description: Cytochrome c oxidase subunit II-like C-terminal

phrase: TSPIMEELTNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLRILYMMDEINNPALTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNDLKPGDLRLLEVDNRIVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVSSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKTFENW
type: DOMAIN
name: Cyt_c_oxidase_su2
description: Cytochrome c oxidase, subunit II

phrase: YPFQLGLQDATSPIMEELTNFHDHTLMIVFLISSLVLYIISLMLTTKLTHTSTMDAQEVETIWTILPAVILILIALPSLR
type: DOMAIN
name: Cyt_c_oxidase_su2_TM_dom
description: Cytochrome C oxidase subunit II, transmembrane domain

phrase: NPALTVKTMGHQWYWSYEYTDYEDLCFDSYMIPTNDLKPGDLRLLEVDNRIVLPMELPIRMLISSEDVLHSWAVPSLGLKTDAIPGRLNQATVSSNRPGLFYGQCSEICGSNHSFMPIVLEMVPLKTFENWST
type: DOMAIN
name: CcO_II-like_C
description: Cytochrome c oxidase subunit II-like C-terminal
Protein sequence:
MAPTGAKKGLLERLDAGEVVIGDGGFVFALEKRGYVKAGPWTPEAAVEHPEAVRQLHREFLRAGANVMQTFTFYASDDKLENRGNYVAKKISGQKVNEAACDIAREVANEGDALVAGGVSQTPSYLSCKSEVEVKGIFRKQLDVFIKKNVDFLIAEYFEHVEEAVWAVEVLKESGKPVAATLCIGPQGDLNGVTPGECAVRLAKAGASVVGVNCHFDPMTCIATVKLMKEGLVAAKVKAHLMTQPLAYHTPDCGKQGFIDLPEFPFALEPRIVTRWDIHKYAREAYNLGVRYIGGCCGFEPYHTRAIAEELAPERGFLPPGSEKHGSWGSGLEMHTKPWVRARARRDYWEKLPPASGRPCCPSMSKPDAWGVTKGDADLMQQKEATTEQQLIDLFAKQCIKSN

Annotated regions:
phrase: VIGDGGFVFALEKRGYVKAGPWTPEAAVEHPEAVRQLHREFLRAGANVMQTFTFYASDDKLENRGNYVAKKISGQKVNEAACDIAREVANEGDALVAGGVSQTPSYLSCKSEVEVKGIFRKQLDVFIKKNVDFLIAEYFEHVEEAVWAVEVLKESGKPVAATLCIGPQGDLNGVTPGECAVRLAKAGASVVGVNCHFDPMTCIATVKLMKEGLVAAKVKAHLMTQPLAYHTPDCGKQGFIDLPEFPFALEPRIVTRWDIHKYAREAYNLGVRYIGGCCGFEPYHTRAIAEE
type: DOMAIN
name: HCY_dom
description: Homocysteine-binding domain

phrase: KGLLERLDAGEVVIGDGGFVFALEKRGYVKAGPWTPEAAVEHPEAVRQLHREFLRAGANVMQTFTFYASDDKLENRGNYVAKKISGQKVNEAACDIAREVANEGDALVAGGVSQTPSYLSCKSEVEVKGIFRKQLDVFIKKNVDFLIAEYFEHVEEAVWAVEVLKESGKPVAATLCIGPQGDLNGVTPGECAVRLAKAGASVVGVNCHFDPMTCIATVKLMKEGLVAAKVKAHLMTQPLAYHTPDCGKQGFIDLPEFPFALEPRIVTRWDIHKYAREAYNLGVRYIGGCCGFEPYHTRAIAEE
type: DOMAIN
name: HCY_dom
description: Homocysteine-binding domain
Protein sequence:
MDIDQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVEGLRQVATLPDPIGEMSNLKYRPSGIQVGQMRVPLGVIGIIYESRPNVTIDAAALCLKSGNATILRGGSEALESNTALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEARVPMIKHLDGICHVYVDDRASVTKALTVCDNAKTHRYGTCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDADARAVLEAAGVGPLVDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREVDSASVMVNASTRFADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGHGEGRQ

Annotated regions:
phrase: ARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVEGLRQVATLPDPIGEMSNLKYRPSGIQVGQMRVPLGVIGIIYESRPNVTIDAAALCLKSGNATILRGGSEALESNTALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEARVPMIKHLDGICHVYVDDRASVTKALTVCDNAKTHRYGTCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDADARAVLEAAGVGPLVDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREVDSASVMVNASTRFADGFEFGLGAEIGISNDKLHARGPVGLEGLTSL
type: DOMAIN
name: GPR_dom
description: GPR domain

phrase: TAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVEGLRQVATLPDPIGEMSNLKYRPSGIQVGQMRVPLGVIGIIYESRPNVTIDAAALCLKSGNATILRGGSEALESNTALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEARVPMIKHLDGICHVYVDDRASVTKALTVCDNAKTHRYGTCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDADARAVLEAAGVGPLVDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREVDSASVMVNASTRFADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVL
type: DOMAIN
name: GPR_dom
description: GPR domain

phrase: RRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVEGLRQVATLPDPIGEMSNLKYRPSGIQVGQMRVPLGVIGIIYESRPNVTIDAAALCLKSGNATILRGGSEALESNTALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEARVPMIKHLDGICHVYVDDRASVTKALTVCDNAKTHRYGTCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDADARAVLEAAGVGPLVD
type: DOMAIN
name: Aldehyde_DH_dom
description: Aldehyde dehydrogenase domain

phrase: YMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVEGLRQVATLPDPIGEMSNLKYRPSGIQVGQMRVPLGVIGIIYESRPNVTIDAAALCLKSGNATILRGGSEALESNTALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEARVPMIKHLDGICHVYVDDRASVTKALTVCDNAKTHRYGTCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDADARAVLEAAGVGPLVDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREVDSASVMVNASTRFADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGHGEG
type: DOMAIN
name: GPR_dom
description: GPR domain

phrase: VDGIDAAIEHINEYGSHHTDA
type: CONSERVED_SITE
name: G-glutamylP_reductase_CS
description: Gamma-glutamyl phosphate reductase GPR, conserved site
Protein sequence:
MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTGREGMEYAWFNNVETKPGIGYPKNWEDQEEWQGGWVRDVNGKIRPRLGNKMGVITKIFANPVVPQIDDYYEPFTFDYEHLHSAPEGKHIPTARPRSLIDGKRMDKVIWGPNWEELLGGEFEKRARDRNFEAMQKEMYGQFENTFMMYLPRLCEHCLNPSCVATCPSGAIYKREEDGIVLIDQDKCRGWRLCISGCPYKKIYFNWKSGKSEKCIFCYPRIESGQPTVCSETCVGRIRYLGVLLYDADRIEEAASTEREVDLYERQCEVFLDPHDPSVIEEALKQGIPQNVIDAAQRSPVYKMAMDWKLALPLHPEYRTLPMVWYVPPLSPIQSYADAGGLPKSEGVLPAIESLRIPVQYLANMLSAGDTGPVLRALKRMMAMRHYMRSQTVEGVTDTRAIDEVGLSVAQVEEMYRYLAIANYEDRFVIPTSHREMAGDAFAERNGCGFTFGDGCHGSDSKFNLFNSSRIDAINITEVRDKAEGE

Annotated regions:
phrase: LSPIQSYADAGGLPKSEGVLPAIESLRIPVQYLANMLSAGDTGPVLRALKRMMAMRHYMRSQTVEGVTDTRAIDEVGL
type: DOMAIN
name: Nitr_red_bet_C
description: Respiratory nitrate reductase beta, C-terminal

phrase: FMMYLPRLCEHCLNPSCVATCPSGAIYKREEDGIVLIDQDKCRGWRLCISGCPYKKIYFNWKSGKSEKCIFCYPRIESGQPTVCSETCVGRIRYLG
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: TFMMYLPRLCEHCLNPSCVATCPSGAIYKRE
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: VGMVLNLDKCIGCHTCSVTCKNVWTGRE
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain

phrase: GIVLIDQDKCRGWRLCISGCPYKKIYFNW
type: DOMAIN
name: 4Fe4S_Fe-S-bd
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain
Protein sequence:
MAAAANEKDFSTAILESKTKNTLIVCDKDCSKLRTYQVGLHPTTLNELELFESDYVRILGKKKAELIFSTVALESVPPRHIAIVRDGRFNLRIRITDTVKLYRVDKDIPVVSKLNFLPIKDTVENIRGNIFDEFVRPFLDFNFMPLTTGSIYGVTSGLGRVEFKVTKMIDAQDMEIKHGSVTSTTSVYCDETISREEVEKEFNMVGYDDVGGCRAQMAKIRELVELPLRHSQLYSKIGVKPPKGILLYGPPGTGKTLIARAIANETGAFLFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDALAPKREKSQGEVERRIVSQLLTLMDGMKARSNVIVLGATNRPNSIDPALRRYGRFDREIEIGVPDETGRLEILRIHTKNMKMSEDVDLVAINKELHGFTGSDLASLCSEAALQQIREKLPQIDLDSEKIDAKVLASLKVNSENFRYAIEHTDPSSLRETVIQSPNVKWSDIGGLEQVKQELRETVQYPVEYPEKFIKFGMTPAKGVLFYGPPGCGKTLLAKAVATECKANFISIKGPELLSMWVGESESNIRDLFARARGAAPCVLFFDEIDSIAKARSGNDGSSGATDRMLNQLLSEMDGINQKKNVFVIGATNRPDQLDSALMRPGRLDQLVYIPLPDLDSRVSILQATLKKTPLSPEIDLRQLAEATDKFSGADLSEICQRACKLAIRETIEYELEQKKKGSEMMDLEDPVPYLRPDHLVQSLKTARRSVSEKEVERYEAFARSMKVDVRKFDKKNDINDDGLYE

Annotated regions:
phrase: VIVLGATNRPNSIDPALR
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: PAKGVLFYGPPGCGKTLLAKAVATECKANFISIKGPELLSMWVGESESNIRDLFARARGAAPCVLFFDEIDSIAKARSGNDGSSGATDRMLNQLLSEMDGINQKKNVFVIGATNRPDQLDSALMRPGRLDQLVYIPLP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: PPKGILLYGPPGTGKTLIARAIANETGAFLFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDALAPKREKSQGEVERRIVSQLLTLMDGMKARSNVIVLGATNRPNSIDPALRRYGRFDREIEIGVP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VLFYGPPGCGKTLLAKAVATECKANFISIKGPELLSMWVGESESNIRDLFARARGAAPCVLFFDEIDSIAKARSGNDGSSGATDRMLNQLLSEMDGINQKKNVFVIGATNRPDQLDSALMRPGRLDQLVYIP
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: ILLYGPPGTGKTLIARAIANETGAFLFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDALAPKREKSQGEVERRIVSQLLTLMDGMKARSNVIVLGATNRPNSIDPALRRYGRFDREIEI
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: DVDLVAINKELHGFTGSDLASLCSEAALQQIREKLPQID
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: IDLRQLAEATDKFSGADLSEICQRACKLAIRETIEYELEQ
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: TLIVCDKDCSKLRTYQVGLHPTTLNELELFESDYVRILGKKKAELIFSTVALESVPPRHIAIVRDGRFNLRIRITDTVKLYRVDK
type: DOMAIN
name: CDC4_N-term_subdom
description: CDC48, N-terminal subdomain

phrase: VFVIGATNRPDQLDSALM
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site
Protein sequence:
MPLNIEDKKAVVAEVSAQVAKAQTIVVAEYRGITVGDLTKLRSTARQQGVYLRVLKNTLARRAVEGTPFASLAEQMTGPLIYGISEDAVSSAKVLNDFAKTNDKLVLRAGSYDGKVLDAAAVKALASIPSRDELIAQLLGVMQAPVSGFARLLAALAAKNAEGAPAEAEAAGA

Annotated regions:
phrase: KKAVVAEVSAQVAKAQTIVVAEYRGITVGDLTKL
type: CONSERVED_SITE
name: Ribosomal_uL10_CS_bac
description: Large ribosomal subunit protein uL10, conserved site, bacteria
Protein sequence:
MVIQKEKKSCGQVVEEWKEFVWNPRTHQFMGRTGTSWAFILLFYLVFYGFLTAMFTLTMWVMLQTVSDHTPKYQDRLATPGLMIRPKTENLDVIVNVSDTESWDQHVQKLNKFLEPYNDSIQAQKNDVCRPGRYYEQPDNGVLNYPKRACQFNRTQLGNCSGIGDPTHYGYSTGQPCVFIKMNRVINFYAGANQSMNVTCAGKRDEDAENLGNFVMFPANGNIDLMYFPYYGKKFHVNYTQPLVAVKFLNVTPNVEVNVECRINAANIATDDERDKFAGRVAFKLRINKT

Annotated regions:
Protein sequence:
MEDAGTPCAPPPPAGSQTGAPPANLSSAPHNCSAEGYIYQDSIALPWKVLLAILLALLTLATTLSNAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVMPISTMYAVTGRWTLGQVVCDLWLSSDITCCTASILHLCVIALDRYWAITDAVEYSAKRTPKRAAVMIALVWVFSISISLPPFFWRQAKAEEEVSDCVVNTDHILYTVYSTVGAFYFPTLLLIALYGRIYVEARSRILKQTPNRTGKRLTRAQLITDSPGSTSSVTSVNSRAPDVPSESGSPVYVNQVKVRVSDALLEKKKLMAARERKATKTLGIILGAFIVCWLPFFIISLVMPICKDACWFHLAIFDFFTWLGYLNSLINPIIYTMSNEDFKQAFHKLIRFKCAS

Annotated regions:
phrase: SNAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVMPISTMYAVTGRWTLGQVVCDLWLSSDITCCTASILHLCVIALDRYWAITDAVEYSAKRTPKRAAVMIALVWVFSISISLPPFFWRQAKAEEEVSDCVVNTDHILYTVYSTVGAFYFPTLLLIALYGRIYVEARSRILKQTPNRTGKRLTRAQLITDSPGSTSSVTSVNSRAPDVPSESGSPVYVNQVKVRVSDALLEKKKLMAARERKATKTLGIILGAFIVCWLPFFIISLVMPICKDACWFHLAIFDFFTWLGYLNSLINPII
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM
Protein sequence:
MSLGTTDIASETGDDSLSAITFESDIESKTKRKSFHKPPSTSPKSPYYSKPRKVTSWRSLKTAGSMPLSSRMSLTPQKLWLGSSKQGSVAQPPSPTLTSEHAWTHPPSCTPDYLTEAVRAKRADLRRSGSHGHVSGTSVYREKEDMYDEIIELKKSLHMQKSDVDLMRTKLRRLEEENSRKDRQIEQLLDPSRGPDFVRTLAEKKPDTGWVITGLKQRIFRLEQQCKEKDNTINKLQTDMKTTNLEEMRIAMETYYEEIHRLQTLLASSEATGKKPMVEKKLGVKRQKKMSSALLNLTRSVQELTEENQSLKEDLDRMLSNSPTISKIKGYGDWSKPRLLRRIAELEKKVSSSESPKQSTSELVNPNPLVRSPSNISVQKQPKGDQSPEDLPKVAPCEEQEHLQGTVKSLREELGALQEQLLEKDLEMKQLLQSKIDLEKELETAREGEKGRQEQEQALREEVEALTKKCQELEEAKREEKNSFVAVTHEAHPELHAPSPCSRHSEPDSDNSAGEEGSSQPPAPCSEERREAAIRTLQAQWKAHRRKKREAALDEAATVLQAAFRGHLARSKLVRSKVPDSRSPSLPGLLSPLNQSSPAPRVLSPISPAEENPTQEEAVIVIQSILRGYLAQARFIASCCREIAASSQRETVSLTPSGSASPPSLRASPGVIRKELCASEELRETSASEPAPSVPYSAQGGHGDCPSSSSLEAVPSMKDAMCEERSSSPRSAGPSLAEPSPPELQPLSPPPVEDICSDDSDDIIFSPFLPRKKSPSPF

Annotated regions:
phrase: EAATVLQAAFRGHLARS
type: BINDING_SITE
name: IQ_motif_EF-hand-BS
description: IQ motif, EF-hand binding site

phrase: EAVIVIQSILRGYLAQAR
type: BINDING_SITE
name: IQ_motif_EF-hand-BS
description: IQ motif, EF-hand binding site

phrase: ALDEAATVLQAAFRGHLARSKL
type: BINDING_SITE
name: IQ_motif_EF-hand-BS
description: IQ motif, EF-hand binding site

phrase: TQEEAVIVIQSILRGYLAQARF
type: BINDING_SITE
name: IQ_motif_EF-hand-BS
description: IQ motif, EF-hand binding site