nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MPQNEYIEQHIKQHGRRLDHDERKRKREAREAHKISEKAQKLTGWKGKQFAKKRYAEKVAMKKKIRAHEQSKVKGGSKPLDENGEALPTYLLDREQNNTAKAISSSIKQKRLEKADKFSVPLPKVRGISEEEMFKVVKTGKSKSKAWKRMITKHTFVGEGFTRRPVKMERIIRPSALRQKKANVTHPELGVTVFLPILAVKKNPQSPMYTQLGVLTKGTIIEVNVSELGMVTSGGKVVWGKYAQITNEPDRDGCVNAVLLV

Annotated regions:
Protein sequence:
MESVALYSFQATESDELAFNKGDTLKILNMEDDQNWYKAELRGVEGFIPKNYIRVKPHPWYSGRISRQLAEEILMKRNHLGAFLIRESESSPGEFSVSVNNRAQRGPCLGPKSHSRLG

Annotated regions:
phrase: VALYSFQATESDELAFNKGDTLKILNMEDDQNWYKAELRGVEGFIP
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: MESVALYSFQ
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: DELAFNKGDTLKILN
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: DQNWYKAEL
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: VEGFIPKNYIRV
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: HPWYSGRISRQLAEEILMKRNHLGAFLIRESESSPGEFSVSVNNRAQRGPCLGPKSHSR
type: DOMAIN
name: SH2
description: SH2 domain

phrase: WYSGRISRQLAEEILMKRNHLGAFLIRESESSPGEFSVSVNNRAQRGPCLGPKSHSRL
type: DOMAIN
name: SH2
description: SH2 domain

phrase: ESVALYSFQATESDELAFNKGDTLKILNMEDDQNWYKAELRGVEGFIPKNYIR
type: DOMAIN
name: GRAP_N_SH3
description: GRAP, N-terminal SH3 domain

phrase: WYSGRISRQLAEEILMKRNHLGAFLIRESESSPGEFSVSVNNR
type: DOMAIN
name: SH2
description: SH2 domain

phrase: MESVALYSFQATESDELAFNKGDTLKILNMEDDQNWYKAELRGVEGFIPKNYIRVKP
type: DOMAIN
name: SH3_domain
description: SH3 domain

phrase: MESVALYSFQATESDELAFNKGDTLKILNMEDDQNWYKAELRGVEGFIPKNYIRVK
type: DOMAIN
name: SH3_domain
description: SH3 domain
Protein sequence:
MRAATISRKTKETEIAVSVDLDGTGAATVSTGVGFFDHMLEQLARHSLIDISVAATGDLHIDQHHTVEDTGIALGQALRQALGDRAGIARYANALLPMDETLTRAAIDVSGRPFLVFKTEFRRAKIGEFDTELVREFFQAFVMNAGLTVHIETLYGENAHHIAESCFKALARALRLAIEVDPRQKGAIPSTKGSLAG

Annotated regions:
phrase: IDQHHTVEDTGIA
type: CONSERVED_SITE
name: ImidazoleglycerP_deHydtase_CS
description: Imidazoleglycerol-phosphate dehydratase, conserved site

phrase: GENAHHIAESCF
type: CONSERVED_SITE
name: ImidazoleglycerP_deHydtase_CS
description: Imidazoleglycerol-phosphate dehydratase, conserved site
Protein sequence:
MSIMPVKNALAQGRTLLMGRMPAVKFSTRMQLRNRTAVLWNRKFSTRLFVQQRRSSGEIVDRAKAAAANSGRKQVSMKWVVLTSFTIVLGTILLVSRNDSTEEDATEGKKGRRTRKIKIFNNNWLFFCYSTLPLNAMSRLWGQVNSLTLPIWVRPWGYRLYSFLFGVNLDEMEDPDLTHYANLSEFFYRNIKPGTRPVAQGEDVIASPSDGKILQVGIINSETGEIEQVKGMTYSIKEFLGTHSHPLMSKSASSLDLTSDEEKHREFARVNRIQLAGSEDTEQPLLNFKNEGDQSVREFKPSVSKNIHLLSQLSLNYFSNGFSCSEPHDTELFFAVIYLAPGDYHHFHSPVDWVCKVRRHFPGDLFSVAPYFQRNFPNLFVLNERVALLGSWKYGFFSMTPVGATNVGSIKLNFDQEFVTNSKSDKHLEPHTCYQAVYENASKILGGMPLVKGEEMGGFELGSTVVLCFEAPTEFKFDVRVGDKVKMGQKLGIIGKNDLK

Annotated regions:
Protein sequence:
MNKVNFRILGLQKYQDIYYIMQKFITCLKKNNINEIWLLEHYPVFTQGNSDNFNKKYIFNIPVVKTDRGGHMTFHGPGQKIIYFLLNIKNLNIKISKLIFYLENIIISTLSYFKINSYSIKNSPGVYVDKKKICSIGLRIKDGYSLHGLALNVDMDLYPFSHIHPCGDKNIKMTQIRDLISNINLEKLNTQIINNCKKFLMMNNFEINFLNSIKIF

Annotated regions:
phrase: KKNNINEIWLLEHYPVFTQGNSDNFNKKYIFNIPVVKTDRGGHMTFHGPGQKIIYFLLNIKNLNIKISKLIFYLENIIISTLSYFKINSYSIKNSPGVYVDKKKICSIGLRIKDGYSLHGLALNVDMDLYPFSHIHPCGDKNIKMTQIRDLISNINLEKLNTQIIN
type: DOMAIN
name: BPL_LPL_catalytic
description: Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain

phrase: RGGHMTFHGPGQKII
type: CONSERVED_SITE
name: Octanoyltransferase_CS
description: Octanoyltransferase, conserved site

phrase: KNNINEIWLLEHYPVFTQGNSDNFNKKYIFNIPVVKTDRGGHMTFHGPGQKIIYFLLNIKNLNIKISKLIFYLENIIISTLSYFKINSYSIKNSPGVYVDKKKICSIGLRIKDGYSLHGLALNVDMDLYPFSHIHPCGDKNIKMTQIRDLISNINLEKLNTQIINNCKKFLMMN
type: DOMAIN
name: BPL_LPL_catalytic
description: Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain
Protein sequence:
MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSSSMKSVIERYSDAKGETSSENDPASEIQFWQKEAAILKRQLHNLQENHRQMMGEELSGLSVEALQNLENQLELSLRGVRMKKDQMLIEEIQVLNREGNLVHQENLDLHKKVNLMHQQNMELHEKVSEVEGVKIANKNSLLTNGLDMRDTSNEHVHLQLSQPQHDHETHSKAIQLNYFSFIA

Annotated regions:
phrase: MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSS
type: DOMAIN
name: TF_MADSbox
description: Transcription factor, MADS-box

phrase: PASEIQFWQKEAAILKRQLHNLQENHRQMMGEELSGLSVEALQNLENQLELSLRGVRMKKDQMLIEEIQVLNREGNLVHQENLDLHKK
type: DOMAIN
name: TF_Kbox
description: Transcription factor, K-box

phrase: RGKIAIKRINNSTSRQVTFS
type: DOMAIN
name: TF_MADSbox
description: Transcription factor, MADS-box

phrase: KRRNGLLKKAKELAI
type: DOMAIN
name: TF_MADSbox
description: Transcription factor, MADS-box

phrase: LCDAEVGVIIFSSTGRLYDFS
type: DOMAIN
name: TF_MADSbox
description: Transcription factor, MADS-box

phrase: RINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYD
type: DOMAIN
name: TF_MADSbox
description: Transcription factor, MADS-box

phrase: RGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYD
type: DOMAIN
name: TF_MADSbox
description: Transcription factor, MADS-box

phrase: IQFWQKEAAILKRQLHNLQENHRQMMGEELSGLSVEALQNLENQLELSLRGVRMKKDQMLIEEIQVLNREGNLVHQENLDLHKKVNLMHQ
type: DOMAIN
name: TF_Kbox
description: Transcription factor, K-box

phrase: MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSS
type: DOMAIN
name: TF_MADSbox
description: Transcription factor, MADS-box

phrase: GRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSSSMKSVIERYSDAKGETS
type: DOMAIN
name: MEF2-like_N
description: MADS MEF2-like, N-terminal
Protein sequence:
MEHEKAIKEILGIDDRIRLYAIEKYEKKKKTFYRFTGWDTYKKKMVKVHIPRKLEKEIFSLWKEHQKEKQQLKALEQEVKALLEKYKDAEKIKEVLERIAQESITKTASSHALKTYTDKAKELFKKFEKDLINLYKEGVLKRLTILQVLYLLANLKEMSEEQKNPQFLFKKGISTIIKVAKNERIPNPFGTLKNDFFLSGTQTPYDFLLSSFLEEVLEETLRELLEKEIEKIEAERRAKEYEEKMEKIKEIVEWFESLPHKIKQTAKEVISQNTVEVAEKILKDMEDGNFSLKEVQDYLEKSTRENLVDYFRYLKNL

Annotated regions:
Protein sequence:
MNPKTYIPDTFIEMIREIMPEHLSMDEFIASCRTPLRRSIRVNTLKISVEDFLVRVSDKDWTLTPVPWCDTGFWIEREDEKSVSLGNTAEHMAGLFYIQEASSMMPVTALLKNNDALDCVLDMASAPGSKTTQIACAMQNRGVLVANELAASRIKVLHANLQRCGVYNAALTHFDGCVFGGWAPESFDTILLDAPCSGEGAIRKDGDAMANWSLSSIEDIAAIQRNLIISAFQALKTGGMMVYSTCTLNLSENQHVCHFLKETFGDAVEFEPLGDLFEGAEKSLTEDGFLHVYPQIFDSEGFFVARIRKHAAVETPKVKKRMGKFPFTIVADADKAIIAEQLQATLSITLPAESDVWVREKEVWLFPANLRPLIGEIRFQRMGVKLAEQHKKGYRWQHEAVMTLATGKEDVAIDLAPEQAKEWFMGRDIRPENLLGKGEVVVTYRDYPIGIGKWVGNRIKNGLPRELVRDTNLFDI

Annotated regions:
phrase: IRVNTLKISVEDFLVRVSDKDWTLTPVPWCDTGFWIEREDEKSVSLGNTAEHMAGLFYIQEASSMMPVTALLKNNDALDCVLDMASAPGSKTTQIACAMQNRGVLVANELAASRIKVLHANLQRCGVYNAALTHFDGCVFGGWAPESFDTILLDAPCSGEGAIRKDGDAMANWSLSSIEDIAAIQRNLIISAFQALKTGGMMVYSTCTLNLSENQHVCHFLKETFGDAVEFEPLGDLFEGAEKSLTEDGFLHVYPQIFDSEGFFVARIR
type: DOMAIN
name: Nop2p
description: Nop2p

phrase: AKEWFMGRDIRPENLLGKGEVVVTYRDYPIGIGKWVGNRIKNGLPRELV
type: DOMAIN
name: Nol1_Nop2_Fmu_2
description: rRNA small subunit methyltransferase F, RNA-binding PUA-like domain

phrase: FIASCRTPLRRSIRVNTLKISVEDFLVRVSDKDWTLTPVPWCDTGFWIEREDEKSVSLGNTAEHMAGLFYIQEASSMMPVTALLKNNDALDCVLDMASAPGSKTTQIACAMQNRGVLVANELAASRIKVLHANLQRCGVYNAALTHFDGCVFGGWAPESFDTILLDAPCSGEGAIRKDGDAMANWSLSSIEDIAAIQRNLIISAFQALKTGGMMVYSTCTLNLSENQHVCHFLKETFGDAVEFEPLGDLFEGAEKSLTEDGFLHVYPQIFDSEGFFVARIRK
type: DOMAIN
name: MeTrfase_RsmB-F_NOP2_dom
description: SAM-dependent methyltransferase RsmB-F/NOP2-type domain

phrase: LDCVLDMASAPGSKTTQIACAMQNRGVLVANELAASRIKVLHANLQRCGVYNAALTHFDGCVFGGWAPESFDTILLDAPCSGEGAIRKDGDAMANWSLSSIEDIAAIQRNLIISAFQALKTGGMMVYSTCTLNLSENQHVCHFLKETFGDAVEFEPLGDLFEGAEKSLTEDGFLHVYPQIFDSEGFFVAR
type: DOMAIN
name: MeTrfase_RsmB-F_NOP2_cat
description: SAM-dependent methyltransferase RsmB-F/NOP2-type, catalytic core

phrase: IVADADKAIIAEQLQATLSITLPAESDVWVREKEVWLFPANLRPLIGEIRFQRMGVKLAEQHKKGYRWQHEAVMT
type: DOMAIN
name: YebU_pre-PUA_dom
description: Ribosomal RNA small subunit methyltransferase F, pre-PUA domain

phrase: IPDTFIEMIREIMPEHLSMDEFIASCRTPLRRSIRVNTLKISVEDFLVRVSDKDWTLTPVPWCDTGFWIEREDEKSVSLGNTAEHMAGLFYIQE
type: DOMAIN
name: Methyltr_RsmF_N
description: Ribosomal RNA small subunit methyltransferase F, N-terminal
Protein sequence:
MSFDHLLTSSKRRELLQNLGIGHGSDVFSTGLFRKAECNAETAISQRSIPRANPDHLRPIFDRFATKEIKGKKLMTPEDFIRGYLGLYTEENYNKETVRLLASAADTTKDGDISFEEFCAFEALLCSPDALYLTAFELFDRNASDTISCDEFEAVIRHTQPLHDQDFDFSSEFIKRYFGADKQRNVNYHSFCQLLHDFYEEQGIQAFKRYDKNGNGTISSLDFQQIMTTVKGHLLTDFVRHNLIAVSGGGASGHKFSDTRGGFVTFPYYAAFNSLLAKMELIKRVYVSTTRGNLDIEMTKEEFLHAIQSYTQVTPYEVEILFHLSELNHPGRKTLCLKDIQAIDPERLKRVSQMDRLINIKAVHHKDDRGVGTAFLESAYRFLLGSVAGACGATAVYPIDLVKTRMQNQRTSGSFVGEVMYKNSLDCFKKVVKFEGLLGLYRGLLPQIVGVAPEKAIKLTMNDYMRDKFTKDGKIPLYGEIIAGGTGGMCQVVFTNPLEIVKIRLQTAGEVQQAGKKIGVFTVLKELGFLGLYKGSRACFLRDIPFSAIYFPAYAHAKLASADEDGMNSPGTLFASAFIAGVPAAGLVTPADVIKTRLQVAARAGQTTYNGVIDCARKLIKEEGPMSLWKGTAARVCRSSPQFAVTLLTYEVLQRLFYVDFAGSRPTGSELATTKTIQDESSTNPDHVGGYKLAAATFSGIEHKFGLFLPKFETSK

Annotated regions:
phrase: FYEEQGIQAFKRYDKNGNGTISSLDFQQIMTTVKG
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: MTPEDFIRGYLGLYTEENYNKETVRLLASAADTTKDGDISFEEFCA
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: LYLTAFELFDRNASDTISCDEFEAVIRH
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: QGIQAFKRYDKNGNGTISSLDFQQIMTT
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: TVRLLASAADTTKDGDISFEEFCAFEAL
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: DRNASDTISCDE
type: BINDING_SITE
name: EF_Hand_1_Ca_BS
description: EF-Hand 1, calcium-binding site

phrase: QAFKRYDKNGNGTISSLDFQQIM
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: DKNGNGTISSLD
type: BINDING_SITE
name: EF_Hand_1_Ca_BS
description: EF-Hand 1, calcium-binding site

phrase: IPLYGEIIAGGTGGMCQVVFTNPLEIVKIRLQTAGEVQQAGKKIGVFTVLKELGFLGLYKGSRACFLRDIPFSAIYFPAYAHAKL
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier

phrase: LESAYRFLLGSVAGACGATAVYPIDLVKTRMQNQRTSGSFVGEVMYKNSLDCFKKVVKFEGLLGLYRGLLPQIVGVAPEKAIKLTMNDYMRD
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier

phrase: SPDALYLTAFELFDRNASDTISCDEFEAVIRHTQP
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: SAYRFLLGSVAGACGATAVYPIDLVKTRMQNQRTSGSFVGEVMYKNSLDCFKKVVKFEGLLGLYRGLLPQIVGVAPEKAIKLTMNDYMRDKFTK
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier

phrase: IPLYGEIIAGGTGGMCQVVFTNPLEIVKIRLQTAGEVQQAGKKIGVFTVLKELGFLGLYKGSRACFLRDIPFSAIYFPAYAHA
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier

phrase: PGTLFASAFIAGVPAAGLVTPADVIKTRLQVAARAGQTTYNGVIDCARKLIKEEGPMSLWKGTAARVCRSSPQFAVTLLTYEVLQRLF
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier

phrase: NSPGTLFASAFIAGVPAAGLVTPADVIKTRLQVAARAGQTTYNGVIDCARKLIKEEGPMSLWKGTAARVCRSSPQFAVTLLTYEVLQR
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier
Protein sequence:
MILLSYLLTYLLCALTCSARAIHNGRSLIPRAGSLEQVTDFGDNPSNVKMYIYVPTNLASNPGIIVAIHYCTGTAQAYYQGSPYAQLAETHGFIVIYPESPYEGTCWDVSSQATLTHNGGGNSNSIANMVTWTTKQYNADSSKVFVTGTSSGAMMTNVMAATYPDLFAAGIAYAGVPAGCFLSTADQPDAWNSTCAQGQSITTPEHWASIAEAMYPDYSGSRPKMQIYHGNVDTTLYPQNYEETCKQWAGVFGYNYDAPESTESNTPEANWSRTTWGPNLQGILAGGVGHNIQIHGDEDMKWFGFTN

Annotated regions:
Protein sequence:
MGLVVSAAASCGRLRRSRSRSPPPAVLDPSQSPLSLEREAEPELIRVFRCFDTDGDGLISAAEMREFYGCSVDEAEEMVAAADRDGDGFVSIEELRAVMEGGGLDALRAAFDEYDEDGNGVITAEELRRALRRLNLDGMDLTAEQCAEIVAAVDSDGDGVISFDEFKAMMSKQA

Annotated regions:
phrase: DALRAAFDEYDEDGNGVITAEELRRALRRLNLDGMDLTAEQCAEIVAAVDSDGDGVISFDEFKAMM
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: GGLDALRAAFDEYDEDGNGVITAEELRRALRRLNL
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: ELIRVFRCFDTDGDGLISAAEMREFYGCSVDEAEEMVAAADRDGDGFVSIEELRAV
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: EAEEMVAAADRDGDGFVSIEELRAVM
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: ALRAAFDEYDEDGNGVITAEELRRALRR
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: QCAEIVAAVDSDGDGVISFDEFKAMMSK
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: ELIRVFRCFDTDGDGLISAAEMREFYGC
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: EAEEMVAAADRDGDGFVSIEELRAVMEG
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: LTAEQCAEIVAAVDSDGDGVISFDEFKAMMSKQ
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: DEDGNGVITAEE
type: BINDING_SITE
name: EF_Hand_1_Ca_BS
description: EF-Hand 1, calcium-binding site

phrase: DSDGDGVISFDE
type: BINDING_SITE
name: EF_Hand_1_Ca_BS
description: EF-Hand 1, calcium-binding site

phrase: EAEPELIRVFRCFDTDGDGLISAAEMREFYGCSVD
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: RVFRCFDTDGDGLISAAEMRE
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain

phrase: LRAAFDEYDEDGNGVITAEELRRALRRLNLDGMDLTAEQCAEIVAAVDSDGDGVISFDEFKAMM
type: DOMAIN
name: EF_hand_dom
description: EF-hand domain
Protein sequence:
MSKKLFIQTLGCAMNVRDSEHIIAELSQKEDYSLTQNIEEADLILINTCSVREKPVHKLFSEVGAFEKAKKRGAKIGVCGCTASHLGSEIFKRAPYVDFVLGARNVSKITKAVNTPKFISTDINHDESEYAFGEFRGSPYKSHINISIGCDKKCTYCIVPHTRGDEISIPSSLILKEVEKAAKSGAKEIFLLGQNVNNYGKRFSGVQENIDFSDLLVKISEIEGVERIRFTSPHPLHMDDKFLEIFTNNPKICKSMHMPLQSGNTKVLREMKRGYTKEWFLDRALRLRKMCPDVSISTDIIVAFPGESDNEFEDTMDVLEQVRFEQIFSFKYSPRPLTKAATFINQIDDKTASERLTRLQNRHSEILDEIVAAQKDKIFDVYFEELRANGGVAGRSFNNFLVQVDGSEELLGTTQKAKITNPKRMVLYGELQI

Annotated regions:
phrase: YKSHINISIGCDKKCTYCIVPHTRGDEISIPSSLILKEVEKAAKSGAKEIFLLGQNVNNYGKRFSGVQENIDFSDLLVKISEIEGVERIRFTSPHPLHMDDKFLEIFTNNPKICKSMHMPLQSGNTKVLREMKRGYTKEWFLDRALRLRKMCPDVSISTDIIVAFPGESDNEFEDTMDVLEQVRFEQIFSFKYSPRPLTKAATFINQIDDKTASERLT
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: KLFIQTLGCAMNVRDSEHIIAELSQKEDYSLTQNIEEADLILINTCSVREKPVHKLFSEVGAFEKAKKRGAKIGVCGCTASHLGSEIFKRAPYVDFVL
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: INISIGCDKKCTYCIVPHTRGDEISIPSSLILKEVEKAAKSGAKEIFLLGQNVNNYGKRFSGVQENIDFSDLLVKISEIEGVERIRFTSPHPLHMDDKFLEIFTNNPKICKSMHMPLQSGNTKVLREMKRGYTKEWFLDRALRLRKMCPDVSISTDIIVAFPGESDNEFEDTMD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SKKLFIQTLGCAMNVRDSEHIIAELSQKEDYSLTQNIEEADLILINTCSVREKPVHKLFSEVGAFEKAKKRGAKIGVCGCTASHLGSEIFKRAPYVDFVLGARNVSKITKAVNTPKFISTDINHDESEYAFGEFRGSPYKSHINISIGCDKKCTYCIVPHTRGDEISIPSSLILKEVEKAAKSGAKEIFLLGQNVNNYGKRFSGVQENIDFSDLLVKISEIEGVERIRFTSPHPLHMDDKFLEIFTNNPKICKSMHMPLQSGNTKVLREMKRGYTKEWFLDRALRLRKMCPDVSISTDIIVAFPGESDNEFEDTMDVLEQVRFEQIFSFKYSPRPLTKAATFINQIDDKTASERLTRLQNRHSEILDEIVAAQKDKIFDVYFEELRANGGVAGRSFNNFLVQVDGSEELLGTTQKAKITNPKRMVLYGE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: KKLFIQTLGCAMNVRDSEHIIAELSQKEDYSLTQNIEEADLILINTCSVREKPVHKLFSEVGAFEKAKKRGAKIGVCGCTASHLGSEIFKRAPYVDFVLGARNVSKITKAVNTPK
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: AAQKDKIFDVYFEELRANGGVAGRSFNNFLVQVDGSEELLGTTQKAKITNPKRMVLYGELQ
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: RGSPYKSHINISIGCDKKCTYCIVPHTRGDEISIPSSLILKEVEKAAKSGAKEIFLLGQNVNNYGKRFSGVQENIDFSDLLVKISEIEGVERIRFTSPHPLHMDDKFLEIFTNNPKICKSMHMPLQSGNTKVLREMKRGYTKEWFLDRALRLRKMCPDVSISTDIIVAFPGESDNEFEDTMDVLEQVRFEQIFSFKYSPRPLTKAATFINQIDDKTASERLTRLQNRHSEILD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: INISIGCDKKCTYCIVPHTR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site
Protein sequence:
MAALGGDGFRLLSVSRPERQPESAALGGPGPGLCCWVSVFSCLSLACSYVGSLYVWKSELPRDHPAVIKRRFTSVLVVSSLSPLCVLLWRELTGIQPGTSLLTLMGFRLEGIFPAALLPLLLTMILFLGPLMQLSMDCPCDLADGLKVVLAPRSWARCLTDMRWLRNQVIAPLTEELVFRACMLPMLAPCTGLGPAVFTCPLFFGVAHFHHIFEQLRFRQSSVGSIFLSAGHLIGPVLCHSFCNYMGFPAVCAALEHPQRRPLLAGYALGVGLFLLLLQPLTDPKLYGSLPLCVLLERAGDSEAPLCS

Annotated regions:
phrase: WLRNQVIAPLTEELVFRACMLPMLAPCTGLGPAVFTCPLFFGVAHFHHIFEQLRFRQSSVGSIFLSAGHLIGPVLCHSFCNY
type: DOMAIN
name: Rce1/LyrA-like_dom
description: CAAX prenyl protease 2/Lysostaphin resistance protein A-like domain
Protein sequence:
MSQFSFTKMHGLGNSYIYVNMFEEQIPEEDLALVAEKVSNINTGIGADGMILICPSDVAPVKMRMFNNDGSEGKSCGNGLRCVAKYAYEHKLVEDTVFTIETLAGIVTAEVTVEEGKVTLAKIDMGAPRLTRAEIPMLGEGETPFIRENFLYNNHRYAFTAVSMGNPHAVIFVDDVDQAPLTTLGPVLETHEMFPERVNVEFIEILNEEEMNFRVWERGSGVTQACGTGACAAVVASILNGKMERGKEITVHLAGGDLMIAWTEEGNVLMKGPAEVICRGVYEYKIEA

Annotated regions:
phrase: NNDGSEGKSCGNGL
type: ACTIVE_SITE
name: DAP_epimerase_AS
description: Diaminopimelate epimerase, active site
Protein sequence:
MAYSARLRKAVGAVRATLSAVELCDVQAPEFAQHGDHAVAADAPLVLVACSGGRDSMALAAVSHIVCTSMGVRCGAVIVDHGLQEGSEQVAGEAANRCRALGLGPVIVRNATVQARGEGLEAAARQARYNELCAAARESGAIAVLLAHTMDDQAETVLIGLLRSRGVDALAGMPQVFTRSGVTFARPLLTLTRAETTGICEDLGVEYWDDPTNGDAVDGELPNDYPLRSRVRHDLLPAIERFAGFNVARHFAESARLARMDKEYLDQRSDEVMGEAVTTVDWPASSAAVSTDTPRACAAGDTNDSSHGVGLMISVRRIAREPEAIRLRVIAHALSQAGVNASAAQIAAIDRLVVDWHGQGGVSLPRGYSANRKKHVIRVCQDGAHANR

Annotated regions:
phrase: SVRRIAREPEAIRLRVIAHALSQAGVNASAAQIAAIDRLVVDWHGQGGVSLPRGYS
type: DOMAIN
name: tRNA_Ile_lys_synt_subst-bd
description: tRNA(Ile)-lysidine synthase, substrate-binding domain

phrase: VLVACSGGRDSMALAAVSHIVCTSMGVRCGAVIVDHGLQEGSEQVAGEAANRCRALGLGPVIVRNATVQARGEGLEAAARQARYNELCAAARESGAIAVLLAHTMDDQAETVLIGLLRSRGVDALAGMPQVFTRSGVTFARPLLTLTRAETTGICEDLGVEYWDDPTNGDAVDGELPNDYPLRSRVRHDL
type: DOMAIN
name: tRNA_Ile_lys_synt_N
description: tRNA(Ile)-lysidine synthase, N-terminal

phrase: VLVACSGGRDSMALAAVSHIVCTSMGVRCGAVIVDHGLQEGSEQVAGEAANRCRALGLGPVIVRNATVQARGEGLEAAARQARYNELCAAARESGAIAVLLAHTMDDQAETVLIGLLRSRGVDALAGMPQVFTRSGVTFARPLLTLTRAETTGICEDLGVEYWDDPTNGDAVDGELPNDYPLRSRVRHDLL
type: DOMAIN
name: tRNA_Ile_lys_synt_N
description: tRNA(Ile)-lysidine synthase, N-terminal

phrase: VLVACSGGRDSMALAAVSHIVCTSMGVRCGAVIVDHGLQEGSEQVAGEAANRCRALGLGPVIVRNATVQARGEGLEAAARQARYNELCAAARESGAIAVLLAHTMDDQAETVLIGLLRSRGVDALAGMPQVFTRSGVTFARPLLTLTRAETTGICEDLGVEYWDDPTNG
type: DOMAIN
name: TilS/TtcA_N
description: tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal
Protein sequence:
MASGVGAAFEELPHDGTCDECEPDEAPGAEEVCRECGFCYCRRHAEAHRQKFLSHHLAEYVHGAQAWTPPADGEGAGKEEAEVKVEQEREIESEAGEESESEEESESEEESETEEESEDESDEESEEDSEEEMEDEQESEAEEDNQEEGESEAEGETEAESEFDPEIEMEAERVAKRKCPDHGLDLSTYCQEDRQLICVLCPVIGAHQGHQLSTLDEAFEELRSKDSGGLKAAMIELVERLKFKSSDPKVTRDQMKMFIQQEFKKVQKVIADEEQKALHLVDIQEAMATAHVTEILADIQSHMDRLMTQMAQAKEQLDTSNESAEPKAEGDEEGPSGASEEEDT

Annotated regions:
phrase: VAKRKCPDHGLDLSTYCQEDRQLICVLCPVIGAHQGHQLST
type: DOMAIN
name: Znf_B-box
description: B-box-type zinc finger

phrase: VAKRKCPDHGLDLSTYCQEDRQLICVLCPVIGAHQGHQLST
type: DOMAIN
name: Znf_B-box
description: B-box-type zinc finger

phrase: KRKCPDHGLDLSTYCQEDRQLICVLCPVIGAHQGHQLS
type: DOMAIN
name: Znf_B-box
description: B-box-type zinc finger
Protein sequence:
MIKYFGTDGIRGVVGKTPITADFFFKLGAVIGKILYFYDVKKIIIGRDTRLSSYMLEEALQFGLSLVGVSVISVGVLPTPAISYFTKLFNLEVGVVISASHNQFRDNGIKFFVKNGVKLSAKFERRIEKQLNKTIILKQFVDLGHISYKRALQQKYINFCISTLPNNFRLNNFKIVLDCANGSTYELAPIIFRELGANVVLMSAAPNGLNINDKCGTTDLQEIQRLVLSEKADLGISFDGDGDRVIMIDHFGNSVNGDQILYILAKNYKKNKKLRGGVVGTKMSNGGLSLALSKIGIPFITVNIGDRYIFKKLKEKQWRLGAESSGHVILLDYAPVGDGIITSLQILKIIFDENSTLKSLCSDIHMLPQIIINIKNNIDISFLKNFKIQSVLSKYKDFLGKYSRIMLRLSGTEKCIRIMIEGCCSKKINIFSKMLINVINSVKKSRFSIITMF

Annotated regions:
phrase: NGDQILYILAKNYKKNKKLRGGVVGTKMSNGGLSLALSKIGIPFITVNIGDRYIFKKLKEKQWRLGAESSGHVILLDYAPVGDGIITSLQILKIIFDENSTLKSLCS
type: DOMAIN
name: A-D-PHexomutase_a/b/a-III
description: Alpha-D-phosphohexomutase, alpha/beta/alpha domain III

phrase: KYINFCISTLPNNFRLNNFKIVLDCANGSTYELAPIIFRELGANVVLMSAAPNGLNINDKCGTTDLQEIQRLVLSEKADLGISFDGDGDRVIMID
type: DOMAIN
name: A-D-PHexomutase_a/b/a-II
description: Alpha-D-phosphohexomutase, alpha/beta/alpha domain II

phrase: KYFGTDGIRGVVGKTPITADFFFKLGAVIGKILYFYDVKKIIIGRDTRLSSYMLEEALQFGLSLVGVSVISVGVLPTPAISYFTKLFNLEVGVVISASHNQFRDNGIKFFVKNGVKLSAKFERRIEKQLN
type: DOMAIN
name: A-D-PHexomutase_a/b/a-I
description: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I
Protein sequence:
MTLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTSAEWLNRQFSLIDTGGIDDVDAPFMEQIKHQAGIAMTEADVIVFVVSGKEGVTDADEYVARILYKTNKPVILAVNKVDNPEMRADIYDFYSLGLGDPYPVSSVHGIGTGDVLDAIVGNLPTEVEEENPDIIRFSLIGRPNVGKSSLINAILGEDRVIASPIAGTTRDAIDTNFVDSEGQEYTMIDTAGMRKSGKVYENTEKYSIMRSMRAIDRSDVVLMVINAEEGIREYDKRIAGFAHEAGKGIIIVVNKWDTIKKDNHTVANWEADIRDQFQFLSYAPIVFVSAKTKQRLNKLPEMIKRISESQNRRISSAVLNDVIMDAIAINPTPTDKGKRLKIFYGTQVSVKPPTFVIFVNEEELMHFSYMRFLENQIRQAFGFEGTPIHLIARKRK

Annotated regions:
phrase: PTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTSAEWLNRQFSLIDTGGIDDVDAPFMEQIKHQAGIAMTEADVIVFVVSGKEGVTDADEYVARILYKTNKPVILAVNKVDNPEMRADIYDFYSLGLGDPYPVSSVHGIGTGDVLDAIVGNLPTE
type: DOMAIN
name: G_ENGA
description: EngA-type guanine nucleotide-binding (G) domain

phrase: IRFSLIGRPNVGKSSLINAILGEDRVIASPIAGTTRDAIDTNFVDSEGQEYTMIDTAGMRKSGKVYENTEKYSIMRSMRAIDRSDVVLMVINAEEGIREYDKRIAGFAHEAGKGIIIVVNKWDTIKKDNHTVANWEADIRDQFQFLSYAPIVFVSAKTKQRLNKLPEMIKRISESQ
type: DOMAIN
name: G_ENGA
description: EngA-type guanine nucleotide-binding (G) domain

phrase: RISSAVLNDVIMDAIAINPTPTDKGKRLKIFYGTQVSVKPPTFVIFVNEEELMHFSYMRFLENQIRQAFGFEGTPIHLIA
type: DOMAIN
name: KH_dom-like
description: GTPase Der, C-terminal KH-domain-like

phrase: TVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTSAEWLNRQFSLIDTGGIDDVDAPFMEQIKHQAGIAMTEADVIVFVVSGKEGVTDADEYVARILYKTNKPVILAVN
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: FSLIGRPNVGKSSLINAILGEDRVIASPIAGTTRDAIDTNFVDSEGQEYTMIDTAGMRKSGKVYENTEKYSIMRSMRAIDRSDVVLMVINAEEGIREYDKRIAGFAHEAGKGIIIVVN
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: SLIGRPNVGKSSLINAILGEDRVIASPIAGTTRDAIDTNFVDSEGQEYTMIDTAGMRKSGKVYENTEKYSIMRSMRAIDRSDVVLMVINAEEGIREYDKRIAGFAHEAGKGIIIVVNKWDTIKKDNHTVANWEADIRDQFQFLSYAPIVFVSAKTKQRLNKLPEMI
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: LPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTSAEWLNRQFSLIDTGGIDDVDAPFMEQIKHQAGIAMTEADVIVFVVSGKEGVTDADEYVARILYKTNKPVILAVNKVDNP
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain
Protein sequence:
MKKHTDQPIADVQGSPDTRHIAIDRVGIKAIRHPVLVADKDGGSQHTVAQFNMYVNLPHNFKGTHMSRFVEILNSHEREISVESFEEILRSMVSRLESDSGHIEMTFPYFVNKSAPISGVKSLLDYEVTFIGEIKHGDQYGFTMKVIVPVTSLCPCSKKISDYGAHNQRSHVTISVHTNSFVWIEDVIRIAEEQASCELFGLLKRPDEKYVTEKAYNNPKFVEDIVRDVAEILNHDDRIDAYVVESENFESIHNHSAYALIERDKRK

Annotated regions:
Protein sequence:
MEKLTNVQAQQEEEEEEGPLSVTKLIGGSITAKDIKLLQQASLHTVESVANATKKQLMAIPGLGGGKVEQIITEANKLVPLGFLSARTFYQMRADVVQLSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMYIDTENTFRPERLAAIAQRYKLNESEVLDNVAFTRAHNSDQQTKLIQMAAGMLFESRYALLIVDSAMALYRSDYIGRGELAARQNHLGLFLRMLQRLADEFGVAVVITNQVTASLDGAPGMFDAKKPIGGHIMAHSSTTRLYLRKGKGETRICKIYDSPCLPESEAMFAILPDGIGDARES

Annotated regions:
phrase: TGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMYIDTENTFRPERLAAIAQRYKLNESEVLDNVAFTRAHNSDQQTKLIQMAAGMLFESRYALLIVDSAMALYRSDYIGRGELAARQNHLGLFLRMLQRLADEFGVAVVITNQVTASLDGAPGMFDAKKPIGGHIMAHSSTTRLYLRKG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: RADVVQLSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMYIDTENTFRPERLAAIAQRYKLNESEVLDNVAFTRAHNSDQQTKLIQMAAGMLFESRYALLIVDSAMALYRSDYIGRGELAARQNHLGLFLRMLQRLADEFGVAVVITNQVTASLDGAPGMFDAKKPIGGHIMAHSSTTRLYLRKGKGETRICKIYDSPCLPESEAMFAILPDGIGD
type: DOMAIN
name: DNA_recomb/repair_Rad51_C
description: DNA recombination and repair protein Rad51-like, C-terminal

phrase: DVVQLSTGSKELDKLLGGGIETGSITEIFGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMYIDTENTFRPERLAAIAQRYKLNESEVLDNVAFTRAHNSDQQTKLIQMAAGMLFESRYALLIVDSAMALYRSDYIGRGELAARQNHLGLFLRMLQRLADEFGVAVVITNQ
type: DOMAIN
name: RecA_ATP-bd
description: DNA recombination and repair protein RecA-like, ATP-binding domain

phrase: GAPGMFDAKKPIGGHIMAHSSTTRLYLRKGKGETRICKIYDSPCLPESEAMFAILPDGIGDAR
type: DOMAIN
name: RecA_monomer-monomer_interface
description: DNA recombination and repair protein RecA, monomer-monomer interface
Protein sequence:
MTAIVGFDQLSKALIDAGTNLLSPPSSTDDLLTLLDETESLLKNVEQDQPLSMQSALIPSRNALVSVDLLSHPDSDVRVSVVSCLTEIVRITAPETPYSDDLMKEIFRLTIEAFEKLADASSRSYKKAEFVLDNVAKVKSCLVMLDLECYDLILQMFRNFFKFIRSDHPQLVFSSMELIMIAIIDETEQVSTDLLDSLLATVKKENQNVSPMSWSLAEKVLSRCARKLKPYIIEALKSRGTSLDMYSPVVSSICQSVFNTPKVHSPVNTKEHEEKLDLGHSRKENLSKSSSKRPARHETRGINEKEKVRNGNKSSLLKQSLKQVRSESTDAEITGKRGRKPNSLMNPEDYDISWLSGKRDPLKTSSNKKIQKKGSGGVSSLGKVPAKKTPLPKENSPATSSRSLTGSLKRSRVKMDESDYDSDSLSSPRLKKLASCFRDEEPNQEDDRKIGNSSKQTRSKNGLEKSQKTAKKKPVVEAKIVNSSGKRLSARSVAKRRNLERAPLDTLVPQSSKRKKMVSQVAARQLANESEEETPKSHPTRRRTVRKEVESDGFGEDLVGKRVNIWWPLDKTFYEGVIDSYCTRKKMHRVIYSDGDSEELNLTEERWELLEDDTSADEDKEIDLPESIPLSDIMQRQKVKKSKNVAVSVEPTSSSGVRSSSRTLMKKDCGKRLNKQVEKTREGKNLRSLKELNAETDRTAEEQEVSLEAESDDRSEEQEYEDDCSDKKEQSQDKGVEAETKEEEKQYPNSEGESEGEDSESEEEPKWRETDDMEDDEEEEEEEIDHMEDEAEEEKEEVDDKEASANMSEIEKEEEEEEEDEEKRKS

Annotated regions: