Protein sequence:
MGARASVLTGSKLDAWERIRLRPGSKKAYRLKHLVWASRELERYACNPGLLETAEGTEQLLQQLEPALKTGSEDLKSLWNAIAVLWCVHNRFDIRDTQQAIQKLKEVMASRKSAEAAKEETSPRQTSQNYPIVTNAQGQMVHQAISPRTLNAWVKAVEEKAFNPEIIPMFMALSEGAVPYDINTMLNAIGGHQGALQVLKEVINEEAAEWDRTHPPAMGPLPPGQIREPTGSDIAGTTSTQQEQIIWTTRGANSIPVGDIYRKWIVLGLNKMVKMYSPVSILDIRQGPKEPFRDYVDRFYKTLRAEQATQEVKNWMTETLLVQNSNPDCKQILKALGPEATLEEMMVACQGVGGPTHKAKILAEAMASAQQDLKGGYTAVFMQRGQNPNRKGPIKCFNCGKEGHIAKNCRAPRKRGCWKCGQEGHQMKDCKNGRQANFFREVLASGGHEARQLCAETSVPISPTNGGGSEGTRESESEGGSGRAVPICLPQIPLWDRPIVTAKVGGHLCEALLDTGADDTVLNNIQLEGRWTPKMIGGIGGFIKVKEYNNVTVEVQGKEVQGTVLVGPTPVNILGRNILTGLGCTLNFPISPIAPVPVKLKPGMDGPKVKQWPLSREKIEALTAICQEMEQEGKISRIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPGGLKQRQSVTVLDVGDAYFSCPLDPDFRKYTAFTIPSVNNETPGVRYQYNVLPQGWKGSPAIFQSSMTKILDPFRKSNPEVEIYQYIDDLYVGSDLPLAEHRKRVELLREHLYQWGFTTPDKKHQKEPPFLWMGYELHPDKWTVQPIQLPDKEVWTVNDIQKLVGKLNWASQIYQGIRVKELCKLIRGTKSLTEVVPLSKEAELELEENREKLKEPVHGVYYQPDKDLWVSIQKHGEGQWTYQVYQDEHKNLKTGKYARQKASHTNDIRQLAEVVQKVSQEAIVIWGKLPKFRLPVTRETWETWWAEYWQATWIPEWEFVSTPPLIKLWYQLETEPIVGAETFYVDGAANRNTKLGKAGYVTEQGKQNIIKLEETTNQKAELMAVLIALQDSKEQVNIVTDSQYVLGIISSQPTQSDSPIVQQIIEELTKKERVYLTWVPAHKGIGGNEKIDKLVSKDIRRVLFLEGIDQAQEDHEKYHSNWRALASDFGLPPIVAKEIIASCPKCHIKGEATHGQVDYSPEIWQMDCTHLEGKIIIVAVHVASDFIEAEVIPAETGQETAYFLLKLAARWPVKVIHTDNGPNFTSAAMKAACWWTGIQHEFGIPYNPQSQGVVEAMNKELKSIIQQVRDQAEHLKTAVQMAVFVHNFKRKGGIGGYTAGERLIDILASQIQTTELQKQILKINNFRVYYRDSRDPIWKGPAQLLWKGEGAVVIQDKGDIKVVPRRKAKIIRDYGKQMAGTDSMANRQTESESMEQPGEIP

Annotated regions:
phrase: VDYSPEIWQMDCTHLEGKIIIVAVHVASDFIEAEVIPAETGQETAYFLLKLAARWPVKVIHTDNGPNFTSAAMKAACWWTGIQHEFGIPYNPQSQGVVEAMNKELKSIIQQVRDQAEHLKTAVQMAVFVHNFKRKGGIGGYTAGERLIDI
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: IKCFNCGKEGHIAKNC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: RGCWKCGQEGHQMKDCK
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: KCFNCGKEGHIAKNC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: VYYRDSRDPIWKGPAQLLWKGEGAVVIQDKGDIKVVPRRKAKI
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: IKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPGGLKQRQSVTVLDVGDAYFSCPLDPDFRKYTAFTIPSVNNETPGVRYQYNVLPQGWKGSPAIFQSSMTKILDPFRKSNPEVEIYQYIDDLYVGSDLPLAEHRKRVELLREHLYQWGFTTPDKKHQKEPPFLWMGYE
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: AQEDHEKYHSNWRALASDFGLPPIVAKEIIASCPK
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: VQPIQLPDKEVWTVNDIQKLVGKLNWASQIYQGIRVKELCKLIRGTKSLTEVVPLSKEAELEL
type: DOMAIN
name: RVT_thumb
description: Reverse transcriptase thumb

phrase: ETFYVDGAANRNTKLGKAGYVTEQGKQNIIKLEETTNQKAELMAVLIALQDSKEQVNIVTDSQYVLGIISSQPTQSDSPIVQQIIEELTKKERVYLTWVPAHKGIGGNEKIDKLVSK
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: CEALLDTGADDTVLNNIQLEGRWTPKMIGGIGGFIKVKEYNNVTVEVQGKEVQGTVLVGPTPVNILGRN
type: DOMAIN
name: Peptidase_A2_cat
description: Peptidase A2A, retrovirus, catalytic

phrase: GARASVLTGSKLDAWERIRLRPGSKKAYRLKHLVWASRELERYACNPGLLETAEGTEQLLQQLEPALKTGSEDLKSLWNAIAVLWCVHNRFDIRDTQQAIQKLKEVMASRKSAEAAKEETSPRQ
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: EGKISRIGPENPYNTPIFAIKKKDSTKWRKLVDFRELNKRTQDFWEVQLGIPHPGGLKQRQSVTVLDVGDAYFSCPLDPDFRKYTAFTIPSVNNETPGVRYQYNVLPQGWKGSPAIFQSSMTKILDPFRKSNPEVEIYQYIDDLYVGSDLPLAEHRKRVELLREHLYQWGFTTPDKKHQKEPPFLWMGYE
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: FRVYYRDSRDPIWKGPAQLLWKGEGAVVIQDKGDIKVVPRRKAKIIR
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: ALLDTGADDTV
type: ACTIVE_SITE
name: Aspartic_peptidase_AS
description: Aspartic peptidase, active site

phrase: PEIWQMDCTHLEGKIIIVAVHVASDFIEAEVIPAETGQETAYFLLKLAARWPVKVIHTDNGPNFTSAAMKAACWWTGIQHEFGIPYN
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: KCFNCGKEGHIAKNCR
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: GCWKCGQEGHQMKDCK
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: VTAKVGGHLCEALLDTGADDTVLNNIQLEGRWTPKMIGGIGGFIKVKEYNNVTVEVQGKEVQGTVLVGPTPVNILGRNIL
type: DOMAIN
name: Retropepsin-like_cat_dom
description: Retropepsin-like catalytic domain

phrase: CWKCGQEGHQMKDCK
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: WDRPIVTAKVGGHLCEALLDTGADDTVLNNIQLEGRWTPKMIGGIGGFIKVKEYNNVTVEVQGKEVQGTVLVGPTPVNILGRNILTGLGCT
type: DOMAIN
name: Retropepsins
description: Retropepsins

phrase: EGIDQAQEDHEKYHSNWRALASDFGLPPIVAKEIIASCPKC
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: IVGAETFYVDGAANRNTKLGKAGYVTEQGKQNIIKLEETTNQKAELMAVLIALQDSKEQVNIVTDSQYVLGIISSQPTQSDSPIVQQIIEELTKKERVYLTWVPAHKGIGGNEKIDKLVSKDI
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: YSPVSILDIRQGPKEPFRDYVDRFYKTLRAEQATQEVKNWMTETLLVQNSNPDCKQILKALGPEATLEEMMV
type: DOMAIN
name: Gag_p24_C
description: Retroviral nucleocapsid Gag protein p24, C-terminal domain

phrase: YYQPDKDLWVSIQKHGEGQWTYQVYQDEHKNLKTGKYARQKASHTNDIRQLAEVVQKVSQEAIVIWGKLPKFRLPVTRETWETWWAEYWQATWIPEWEFVS
type: DOMAIN
name: RVT_connect
description: Reverse transcriptase connection

phrase: RASVLTGSKLDAWERI
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: RPGSKKAYRLKHLVWASR
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: ERYACNPGLLETAEG
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: TGSEDLKSLWNAIAVLWCV
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: HNRFDIRDTQQAI
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal