nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MEAEKMELKLYNTMTQQKEVLIPITPGKIGLYVCGITAYDFSHIGHARAAVSFDVLYRYLKHLDYDVTFVRNFTDVDDKIIDRANKNGEDPLDLSNRFCDEYLVDMGALQCLPPTHQPRVSEHMDNIIKMIEKIIEKDCGYVVEGDVFFSVDKSPNYGKLSGQLLEHTRAGERVAVDSRKRNPADFALWKAAKPDEPSWESPWGPGRPGWHIECSAMSVHYLSPKFDIHGGGADLKFPHHENEIAQTCAACEDSGVNYWLHNGHVTINNEKMAKSKHNFKTIREITASYHPLALRHFLMSAQYRSPLSFTASQLESSSEALYYVYQTLQDLDEGLSPYQDALSEDGGKSEQTAEGKDIIKKLKTEFESKMLDDLNTAHILTGAYQDALKFINASLSKLKKMQKKQRMSMLVSLVEIEKAAREVLDVLGLLTTLSYAEILKEMKLKTLIRAEIGEEGISQLIEERITARKNKDFAKSDEIREKLTRKGIALMDIGKETVWRPCFPSQADSST

Annotated regions:
phrase: EGISQLIEERITARKNKDFAKSDEIREKLTRKGIALMDIGKETVW
type: DOMAIN
name: CysS_C
description: Cysteinyl-tRNA ligase, anticodon binding domain

phrase: KLYNTMTQQKEVLIPITPGKIGLYVCGITAYDFSHIGHARAAVSFDVLYRYLKHLDYDVTFVRNFTDVDDKIIDRANKNGEDPLDLSNRFCDEYLVDMGALQCLPPTHQPRVSEHMDNIIKMIEKIIEKDCGYVVEGDVFFSVDKSPNYGKLSGQLLEHTRAGERVAVDSRKRNPADFALWKAAKPDEPSWESPWGPGRPGWHIECSAMSVHYLSPKFDIHGGGADLKFPHHENEIAQTCAACEDSGVNYWLHNGHVTINNEKMAKSKHNFKTIREITASYHPLALRHFLMSAQYRSPLSF
type: DOMAIN
name: tRNA-synt_1_cat_dom
description: tRNA synthetases class I, catalytic domain

phrase: PITPGKIGLYVCGITAYDFSHIGHARAAVSFDVLYRYLKHLDYDVTFVRNFTDVDDKIIDRANKNGEDPLDLSNRFCDEYLVDMGALQCLPPTHQPRVSEHMDNIIKMIEKIIEKDCGYVVEGDVFFSVDKSPNYGKLSGQLLEHTRAGERVAVDSRKRNPADFALWKAAKPDEPSWESPWGPGRPGWHIECSAMSVHYLSPKFDIHGGGADLKFPHHENEIAQTCAACEDSGVNYWLHNGHVTINNEKMAKSKHNFKTIREITASYHPLALRHFLMSAQYRSPLSFTASQLES
type: DOMAIN
name: tRNA-synt_1_cat_dom
description: tRNA synthetases class I, catalytic domain
Protein sequence:
MPPDGKSDMERIGVFKEMGYISIGDKYTSFIYRPFNDSAYKNKQMLLGGTKSKCGLQTGYFDTQFKRIFEREAFTDPVRIDRQYRILQAKKNIGKAFLPSNGEKTTCGMGTYYGTFGGPIQAMSALQIPRKQNKSAGKNFYTNPPKEGSGYGCPDITLSKMVSYSSDPYDRAKEMLKREITAHKSMLKGGAFRLNLHPNEYFDGNPYKFDKPLPPPKKIEEKKHFAVPFKPSSPSKKAGGMKAGAFDSYPTYSAEPYGTKKTKSVVANNEVKIFHPSPGPKSTPIKSIISLNVNKAVNSTNYNRIPSVMSF

Annotated regions:
Protein sequence:
MAHGPRLSSAGTATPNPPPPPPPPPPESSTAGVGEAQAAEAAVPGQSESFKLKFCTVCASNQNRSMEAHLRLSTAPYPVISFGTGSLVRLPGPTITQPNVYHFNTTSYSQMYDELQSKDERLYRNNGLLNMLDRNRNLKWGPERFQDWVPGMPRVDHVSKGDKGALGTEGGAVDVIITCEERCWDAVVDDLMNKGAVLNRPVHVFNVDIKDNHEEALVGGKAILDLAGRLNDAATQERKAHGSEGWENGTGEARRSFDERVPDILAQWQETWPNLPALWTLSWL

Annotated regions:
Protein sequence:
MSPVFPMLTVLTMFYYICLRRRARTATRGEMMNTHRAIESNSQTSPLNAEVVQYAKEVVDFSSHYGSENSMSYTMWNLAGVPNVFPSSGDFTQTAVFRTYGTWWDQCPSASLPFKRTPPNFQSQDYVELTFEQQVYPTAVHVLETYHPGAVIRILACSANPYSPNPPAEVRWEILWSERPTKVNASQARQFKPCIKQINFPTNLIRLEVNSSLLEYYTELDAVVLHGVKDKPVLSLKTSLIDMNDIEDDAYAEKDGCGMDSLNKKFSSAVLGEGPNNGYFDKLPYELIQLILNHLTLPDLCRLAQTCKLLSQHCCDPLQYIHLNLQPYWAKLDDTSLEFLQSRCTLVQWLNLSWTGNRGFISVAGFSRFLKVCGSELVRLELSCSHFLNETCLEVISEMCPNLQALNLSSCDKLPPQAFNHIAKLCSLKRLVLYRTKVEQTALLSILNFCSELQHLSLGSCVMIEDYDVIASMIGAKCKKLRTLDLWRCKNITENGIAELASGCPLLEELDLGWCPTLQSSTGCFTRLAHQLPNLQKLFLTANRSVCDTDIDELACNCTRLQQLDILGTRMVSPASLRKLLESCKDLSLLDVSFCSQIDNRAVLELNASFPKVFIKKSFTQ

Annotated regions:
phrase: FDKLPYELIQLILNHLTLPDLCRLAQTCKLLSQHCCDPLQYI
type: DOMAIN
name: F-box_dom
description: F-box domain

phrase: NGYFDKLPYELIQLILNHLTLPDLCRLAQTCKLLSQHCCDPLQYIHLNLQPYWAK
type: DOMAIN
name: F-box_dom
description: F-box domain

phrase: CTRLQQLDILGTRMVSPASLRKLLE
type: REPEAT
name: Leu-rich_rpt_Cys-con_subtyp
description: Leucine-rich repeat, cysteine-containing subtype

phrase: CKKLRTLDLWRCKNITENGIAELAS
type: REPEAT
name: Leu-rich_rpt_Cys-con_subtyp
description: Leucine-rich repeat, cysteine-containing subtype

phrase: CKDLSLLDVSFCSQIDNRAVLELNA
type: REPEAT
name: Leu-rich_rpt_Cys-con_subtyp
description: Leucine-rich repeat, cysteine-containing subtype

phrase: CPLLEELDLGWCPTLQSSTG
type: REPEAT
name: Leu-rich_rpt_Cys-con_subtyp
description: Leucine-rich repeat, cysteine-containing subtype

phrase: CSELQHLSLGSCVMIEDYDVIASMI
type: REPEAT
name: Leu-rich_rpt_Cys-con_subtyp
description: Leucine-rich repeat, cysteine-containing subtype

phrase: LPNLQKLFLTANRSVCDTDIDELAC
type: REPEAT
name: Leu-rich_rpt_Cys-con_subtyp
description: Leucine-rich repeat, cysteine-containing subtype

phrase: CPNLQALNLSSCDKLPPQAFNHIAK
type: REPEAT
name: Leu-rich_rpt_Cys-con_subtyp
description: Leucine-rich repeat, cysteine-containing subtype
Protein sequence:
MDLRRIMETVNMIDNENLDLRTTTMGISLLDCIDSDSDRACQKIYDKITTKAENLVKVARELETEYGIPIANKRITVTPISLIAAASGDSDYVKYAVTLDKAAKAVGVDLIGGFSALVHKGYQNGDRVLIKSIPQALKETERVCSSVNVGSTRSGINMDAVKEMGQIVIENEKINPLNNGNLVIFCNAVEDNPFMAGGFHGVGESDVALNVGVSGPGVVKTALEKVKGESMDVVAETIKQTAFKVTRMGQLVGQEASKRLGVDFGIVDLSLAPTPAQGDSVANILEEIGLESVGTHGTTAALAMLNDAVKKGGIMACSHVGGLSGAFIPESEDAGMIAAAEKGILTVDKLEAMTAVCSVGLDMIAVPGDTPAETISAMIADEAAIGMINNKTTAVRVIPVPGKDVGDSIEFGGLFGYAPIMPVHKESSAAMINRGGRIPAPVHSFKN

Annotated regions:
Protein sequence:
MQCLLLLPFLLLGTVSALHLENDAPHLESLETQADLGQDLDSSKEQERDLALTEEVIQAEGEEVKASACQDNFEDEEAMESDPAALDKDFQCPREEDIVEVQGSPRCKICRYLLVRTPKTFAEAQNVCSRCYGGNLVSIHDFNFNYRIQCCTSTVNQAQVWIGGNLRGWFLWKRFCWTDGSHWNFAYWSPGQPGNGQGSCVALCTKGGYWRRAQCDKQLPFVCSF

Annotated regions:
phrase: CVALCTKGGYWRRAQCDKQLPFV
type: CONSERVED_SITE
name: C-type_lectin_CS
description: C-type lectin, conserved site

phrase: YLLVRTPKTFAEAQNVCSRCYGGNLVSIHDFNFNYRIQCCTSTVNQAQVWIGGNLRGWFLWKRFCWTDGSHWNFAYWSPGQPGNGQGSCVALCTKGGYWRRAQCDKQLPFVC
type: DOMAIN
name: C-type_lectin-like
description: C-type lectin-like

phrase: CRYLLVRTPKTFAEAQNVCSRCYGGNLVSIHDFNFNYRIQCCTSTVNQAQVWIGGNLRGWFLWKRFCWTDGSHWNFAYWSPGQPGNGQGSCVALCTKGGYWRRAQCDKQLPFVCS
type: DOMAIN
name: EMBP_CTLD
description: Eosinophil major basic protein, C-type lectin-like domain

phrase: CPREEDIVEVQGSPRCKICRYLLVRTPKTFAEAQNVCSRCYGGNLVSIHDFNFNYRIQCCTSTVNQAQVWIGGNLRGWFLWKRFCWTDGSHWNFAYWSPGQPGNGQGSCVALCTKGGYWRRAQCDKQLPFVC
type: DOMAIN
name: C-type_lectin-like
description: C-type lectin-like

phrase: PKTFAEAQNVCSRCYGGNLVSIHDFNFNYRIQCCTSTVNQAQVWIGGNLRGWFLWKRFCWTDGSHWNFAYWSPGQPGNGQGSCVALCTKGGYWRRAQCDKQLPFVCS
type: DOMAIN
name: C-type_lectin-like
description: C-type lectin-like
Protein sequence:
MMVESESIRSTPTSQNGVGSLPNQSDSCVGREGSGSGETNGELNPAELLHFQQQQALQMARQLLLQQATCLNSPSTDNKQPSVQVPVSVAMMSPQMITPQQMQQILSPAQLQAVLQQQQALMLQQLQEYYKKQQEQLHLQLLSQQQAGKQQPKELALGNKQLAFQQQLLQMQQLQQQHLINLQRQNLVGLQSGQGPVPMQSLPQVSPSDLHQLLKEMSSSQEESSKQDTVDLMTSITTSFPTTKVSPPTMHPSLSNGQNTRRESTSHYESSHLLYGHGECRWPGCEALCEDMGQFIKHLNTEHALDDRSTAQCRVQMQVVQQLEIQLAKESERLQAMMTHLHMRPSEPKPFSQPLNLVSSASNNKMSHDTFPDGLPQPPTSATAPITPLRQGTSVISSSSLPSVGPVRRRIVDKFCTPISSELAQNHEFYKNAEVRPPFTYASLIRQAILETPDRQLTLNEIYNWFTRMFAYFRRNTATWKNAVRHNLSLHKCFVRVENVKGAVWTVDELEYQKRRPPKMTGSPTLVKNMISGLGYSALNASYQAALAESSFPLLNSPPLHNSSGSVLHGGHDDVTSTGEPGNSNGSSPRLSPQYSQSIHVKEEPAEDDVRPASISAPTNQTTVLPEDRDLESESPMEDLP

Annotated regions:
phrase: RPPFTYASLIRQAILETPDRQLTLNEIYNWFTRMFAYFRRNTATWKNAVRHNLSLHKCFVRVENVKGAVWTVDELEYQKRRPPKMT
type: DOMAIN
name: FH_FOXP4
description: Forkhead box protein P4, forkhead domain

phrase: EVRPPFTYASLIRQAILETPDRQLTLNEIYNWFTRMFAYFRRNTATWKNAVRHNLSLHKCFVRVENVKGAVWTVDELEYQKR
type: DOMAIN
name: Fork_head_dom
description: Fork head domain

phrase: LYGHGECRWPGCEALCEDMGQFIKHLNTEHALDDRSTAQCRVQMQVVQQLEIQLAKESERLQAMMTHL
type: DOMAIN
name: FOXP-CC
description: FOXP, coiled-coil domain

phrase: RPPFTYASLIRQA
type: DOMAIN
name: Fork_head_dom
description: Fork head domain

phrase: LTLNEIYNWFTRMFAYF
type: DOMAIN
name: Fork_head_dom
description: Fork head domain

phrase: WKNAVRHNLSLHKCFVR
type: DOMAIN
name: Fork_head_dom
description: Fork head domain

phrase: WKNAVR
type: CONSERVED_SITE
name: TF_fork_head_CS_2
description: Fork head domain conserved site 2

phrase: RPPFTYASLIRQAILETPDRQLTLNEIYNWFTRMFAYFRRNTATWKNAVRHNLSLHKCFVRVENVKGAVWTVD
type: DOMAIN
name: Fork_head_dom
description: Fork head domain

phrase: RPPFTYASLIRQAILETPDRQLTLNEIYNWFTRMFAYFRRNTATWKNAVRHNLSLHKCFVRVENVKGAVWTVDELEYQ
type: DOMAIN
name: Fork_head_dom
description: Fork head domain
Protein sequence:
MERRLGVRAWVKENRGSFQPPVCNKLMHQEQLKVMFIGGPNTRKDYHIEEGEEVFYQLEGDMVLRVLEQGKHRDVVIRQGEIFLLPARVPHSPQRFANTVGLVVERRRLETELDGLRYYVGDTMDVLFEKWFYCKDLGTQLAPIIQEFFSSEQYRTGKPIPDQLLKEPPFPLSTRSIMEPMSLDAWLDSHHRELQAGTPLSLFGDTYETQVIAYGQGSSEGLRQNVDVWLWQLEGSSVVTMGGRRLSLAPDDSLLVLAGTSYAWERTQGSVALSVTQDPACKKPLG

Annotated regions:
Protein sequence:
MRVTLALVALCLASVAALPEKQQRIVGGSVTTIEQWPSGSALLYSWNLVTYSQACGGAILNTRSILSAAHCFIGDAANRWRIRTGSTWANSGGVVHNTALIIIHPSYNTRTLDNDIAILRSATTIAQNNQARPASIAGANYNLADNQAVWAIGWGATCPGCAGSEQLRHIQIWTVNQNTCRSRYLEVGGTITDNMLCSGWLDVGGRDQCQGDSGGPLFHNNVVVGVCSWGQSCALARYPGVNARVSRFTAWIQANA

Annotated regions:
phrase: IVGGSVTTIEQWPSGSALLYSWNLVTYSQACGGAILNTRSILSAAHCFIGDAANRWRIRTGSTWANSGGVVHNTALIIIHPSYNTRTLDNDIAILRSATTIAQNNQARPASIAGANYNLADNQAVWAIGWGATCPGCAGSEQLRHIQIWTVNQNTCRSRYLEVGGTITDNMLCSGWLDVGGRDQCQGDSGGPLFHNNVVVGVCSWGQSCALARYPGVNARVSRFTAWIQA
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain

phrase: IVGGSVTTIEQWPSGSALLYSWNLVTYSQACGGAILNTRSILSAAHCFIGDAANRWRIRTGSTWANSGGVVHNTALIIIHPSYNTRTLDNDIAILRSATTIAQNNQARPASIAGANYNLADNQAVWAIGWGATCPGCAGSEQLRHIQIWTVNQNTCRSRYLEVGGTITDNMLCSGWLDVGGRDQCQGDSGGPLFHNNVVVGVCSWGQSCALARYPGVNARVSRFTAWIQAN
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain

phrase: IVGGSVTTIEQWPSGSALLYSWNLVTYSQACGGAILNTRSILSAAHCFIGDAANRWRIRTGSTWANSGGVVHNTALIIIHPSYNTRTLDNDIAILRSATTIAQNNQARPASIAGANYNLADNQAVWAIGWGATCPGCAGSEQLRHIQIWTVNQNTCRSRYLEVGGTITDNMLCSGWLDVGGRDQCQGDSGGPLFHNNVVVGVCSWGQSCALARYPGVNARVSRFTAW
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain

phrase: DQCQGDSGGPL
type: ACTIVE_SITE
name: TRYPSIN_SER
description: Serine proteases, trypsin family, serine active site

phrase: LSAAH
type: ACTIVE_SITE
name: TRYPSIN_HIS
description: Serine proteases, trypsin family, histidine active site

phrase: RIVGGSVTTIEQWPSGSALLYSWNLVTYSQACGGAILNTRSILSAAHCFIGDAANRWRIRTGSTWANSGGVVHNTALIIIHPSYNTRTLDNDIAILRSATTIAQNNQARPASIAGANYNLADNQAVWAIGWGATCPGCAGSEQLRHIQIWTVNQNTCRSRYLEVGGTITDNMLCSGWLDVGGRDQCQGDSGGPLFHNNVVVGVCSWGQSCALARYPGVNARVSRFTAW
type: DOMAIN
name: Trypsin_dom
description: Serine proteases, trypsin domain
Protein sequence:
MRVMGTQRNCQQWWIWGILGFWMLMICNGKGDKEDLWVTVYYGVPVWRDAQTSLFCASDAKAYDTEVHNVWATHACVPTDPNPQEMVLKNVTENFDMWKNNMVDQMHQDIISLWDQSLKPCVKMTPLCVTLNCTNATTAMNATIDNNMQGEIKNCTFNVTTEIRDKVKKVHALFYKLDIAPLGNSASSDNSSSGGKGTRNNEYNDYILINCNTSAIAQACPKVSFDPIPIHYCAPAGYAILKCNDKTFNGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEGDIIIRSENMTSNTKTIIVHLNESVSINCTRPNNNTRESLRIGPGQALYATGDIIGDIRQAHCNISKERWNKTLERVKKRLAEYFPNTTILFAPPPGGDLEVTTHSFNCRGEFFYCNTSNLFNSSKTNITANENGTITLPCRIKPIETLGQGVGKAIIAPSIKGKLPGTSKFPGLPLAPSRGEKIGTYGNLAKREFSPGGGDMSDNWRSELYKYKVVEINPLGVAPTKAKRRVVEREKRAVGIGAVFLGFLSAAGSTMGAASITLTVQARQLLSGIVQQQNNLLRAIEAQQHMLKLTVWGIKQLQARVLAIERYLKDQQLLGIWGCSGKLICTTAVPWNESWSNKSQNEIWDNMTWMQWDREINNYTNEIYRLLGESQIQQEKNEQDLLALDKWQNLWSWFDITNWLWYIKMFIMIVGGLIGLRIVFAVLSIVNRIRQGYSPLSLQTLNLNPREPDRLERIEEEGGEQDRDRSIRLVSGFLALAWD

Annotated regions:
phrase: MGAASITLTVQARQLLSGIVQQQNNLLRAIEAQQHMLKLTVWGIKQLQARVLAIERYLKDQQLLGIWGCSGKLICTTAVPWNESWSNKSQNEIWDNMTWMQWDREINNYTNEIYRLLGESQIQQEKNEQDLLALDKWQNLWSWFDITNWLWYIKMFIMIVGGLIGLRIVFAVLSIVNRIRQGYSPLSLQT
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: VQARQLLSGIVQQQNNLLRAIEAQQHMLKLTVWGIKQLQARVLAIERYLKDQQLLGIWGCSGKLICTTAVPWNESWSNKSQNEIWDNMTWMQWDREINNYTNEIYRLLGESQIQQEKNEQDLLALD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: LWVTVYYGVPVWRDAQTSLFCASDAKAYDTEVHNVWATHACVPTDPNPQEMVLKNVTENFDMWKNNMVDQMHQDIISLWDQSLKPCVKMTPLCVTLNCTNATTAM
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: ATIDNNMQGEIKNCTFNVTTEIRDKVKKVHALFYKLDIAPLGNSASSDNSSSGGKGTRNNEYNDYILINCNTSAIAQACPKVSFDPIPIHYCAPAGYAILKCNDKTFNGTGPCNNVSTVQCTHGIKPVVSTQLLLNGSLAEGDIIIRSENMTSNTKTIIVHLNESVSINCTRPNNNTRESLRIGPGQALYATGDIIGDIRQAHCNISKERWNKTLERVKKRLAEYFPNTTILFAPPPGGDLEVTTHSFNCRGEFFYCNTSNLFNSSKTNITANENGTITLPCRIKPIETLGQGVGKAIIAPSIKGKLPGTSKFPGLPLAPSRGEKIGTYGNLAKREFSPGGGDMSDNWRSELYKYKVVEINPLGVAPTKAKRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120
Protein sequence:
MKKSQKRISNVSEIKAQLKTVETKVHNGVFLFSGIMTIAELAQKINVSVNQIITYFFHQAKMYNLNHSLSEDEIAEICLEFGLDFKKEVQIDASNFMEEVSILDQDKDLSPRPPIITVMGHVDHGKTTLLDYIRKTNIAKNEKGGITQHTGAYQVVFQGHIINFIDTPGHEAFTQMRARGAKVTDIIVLVVAADDGVMPQTKEAINHAAAANVPIIVFVNKMDKPNKDVDRIKNELSALNIVTEEWGGSNIFVYGSALTGQGIDTLFSSILLLAEILELKANKNRYPIGTVIEAKLHHNKGTIATLMVQNGTLMVRDFIVAGYQYGRIRSLENTNGQPIKFAPPGTPVIVTGLNYVPEAGDKFFGFHEEKFAKQLALERKQSEKISKTKVQTKQQTKEKTLNIIIKADVAGIAQALHSTIEKLASKQVHIHILHSGVGIVNKADILLAQTSNSIIYAFNLQIPAAIKAQAKQAQVEIREHTIIYKIVDEIKKQVRGMREIRYELQQIGTAKIIAKFWFSKVGSIAGCSVLSGKFVENCKIELWRNSKLIHSGKIESLQRDKNPVKEVQVGNEFGTHIYKFNDIEIGDELKAFLDVEIEE

Annotated regions:
phrase: ITVMGHVDHGKTTLLDYIRKTNIAKNEKGGITQHTGAYQVVFQGHIINFIDTPGHEAFTQMRARGAKVTDIIVLVVAADDGVMPQTKEAINHAAAANVPIIVFVNKMDKPNKDVDRIKNELSALNIVTEEWGGSNIFVYGSALTGQGIDTLFS
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: MTIAELAQKINVSVNQIITYFFHQAKMYNLNHSLSEDEIAEICLEFG
type: DOMAIN
name: IF2_N
description: Translation initiation factor IF-2, N-terminal

phrase: IITVMGHVDHGKT
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: IIVFVNKMD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: PIGTVIEAKLHHNKGTIATLMVQNGTLMVRDFIVAGYQYGRIRSLENTNGQPIKFAPPGTPVIVTGLNYVPEAGDKFFGFHEEKFAKQLALERK
type: DOMAIN
name: IF2_II
description: Translation initiation factor IF-2, domain II

phrase: GTVIEAKLHHNKGTIATLMVQNGTLMVRDFIVAGYQYGRIRSLENTNGQPIKFAPPGTPVIVTGLNYVPEAGDK
type: DOMAIN
name: EF-G-like_DII
description: Elongation factor G-like, domain II

phrase: RKQSEKISKTKVQTKQQTKEKTLNIIIKADVAGIAQALHSTIEKLASKQVHIHILHSGVGIVNKADILLAQTSNSIIYAFNLQIPAAIKAQAKQAQVEIREHTIIYKIVDEI
type: DOMAIN
name: TIF_IF2_dom3
description: Translation initiation factor IF- 2, domain 3

phrase: IITVMGHVDHGKTTLLDYIRKTNIAKNEKGGITQHTGAYQVVFQGHIINFIDTPGHEAFTQMRARGAKVTDIIVLVVAADDGVMPQTKEAINHAAAANVPIIVFVNKMDKPNKDVDRIKNELSALNIVTEEWGGSNIFVYGSALTGQGIDTLFSSI
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: PRPPIITVMGHVDHGKTTLLDYIRKTNIAKNEKGGITQHTGAYQVVFQGHIINFIDTPGHEAFTQMRARGAKVTDIIVLVVAADDGVMPQTKEAINHAAAANVPIIVFVNKMDKPNKDVDRIKNELSALNIVTEEWGGSNIFVYGSALTGQGIDTLFSSILLLAEIL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain
Protein sequence:
MPQVLMGNTRLHAPLEDGIPLIENDENSSQNEVDLYDYVSMSSYGGDNDFLISSAGGNITPENRPSFSAHVVLFAISALVIKPVCCFIFLNHYVITGSYDFAVAGGVCTVLYYMRLALTAWFMFRNIQSDMLPLNVWQQFVIGCMALGRTVAFMVVSYTTLFIRSELFFSMLAPNAGREYITPIIAHKLMPLISVRSAVCLVIISTAVYAADAICDTIGFTLPRMWMCILMRSSSVKRS

Annotated regions:
Protein sequence:
MKILSDIIYKIKVEKEIGDININISNISFDSRTIVQGDVFIAIKGYDLDGHQYIQSAIHKGAVAIICEEIPTDVVANVTYIQVKNTSYALGIIASNYYNHPSDQITLVGVTGTNGKTTTATLLYNLFQNLGYRCALLSTIENRIADQKLNTRHTTPDPITINQLLSQAVEKKCEYAFMEVSSHGIHQERLAGLNFKVGAFTNISHDHLDYHKTFANYLAAKKKFFDDLPKSAIAISNIDDKNGLVMLQNTEAKKVTYSLKSNSMYKGKIIENRLDGMLLNFNQQEFWTSLAGKFNAYNELLAYSIALELGFESTEVLKALSNLNRVKGRFETYVSNDKKYIIVDYAHTPDALQNILEAINQIRTRNEQLITVFGCGGHRDKEKRPIMGKIATRFSDLSIITSDNPRDEEPEQIIKEIEGGIEPQNTNKYLSITDRKQAIKTAIKISKPKDIILIAGKGHEDYQEVKDERLPFDDMLIAKELLTN

Annotated regions:
phrase: VTGTNGKTTTATLLYNLFQNLGYRCALLSTIENRIADQKLNTRHTTPDPITINQLLSQAVEKKCEYAFMEVSSHGIHQERLAGLNFKVGAFTNISHDHLDYHKTFANYLAAKKKFFDDLPKSAIAISNIDDKNGLVMLQNTEAKKVTYSLKSNSMYKGKIIENRLDGMLLNFNQQEFWTSLAGKFNAYNELLAY
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: ISNISFDSRTIVQGDVFIAIKGYDLDGHQYIQSAIHKGAVAIICEEIPTDVVANVTYIQVKNTSYALGIIASNY
type: DOMAIN
name: Mur_ligase_N
description: Mur ligase, N-terminal catalytic domain

phrase: GRFETYVSNDKKYIIVDYAHTPDALQNILEAINQIRTRNEQLITVFGCGGHRDKEKRPIMGKIATRFSDLSIITSDNPRDEEPEQIIKEIEGGIEPQNTNKYLSITDRKQAIKTAIKISKPKDIILIAGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MAKPRVHEIAAEIGVDSKTALAKLKEMGEFVKGPSSSIEPPVARKLKAALEAAGLTGQAAAPAAAPSSAPRPGARSSAPKPGGRPTPGPQPTAAPEVEAPEASDVPVPAKPLTVAERQAQAEASRKAAAEEKAQAEKSAASATPDAPAAETPSAPRPDAGSAPAPSNGIPRPGIPRPAAPRPGNNPFASNQGMGTKPRPGNNPFASNQGMGQRPAAGAAGPRPAAPRPGSPRPGAPRPGGVGQGARPAGFGQRPAGAGRPGGAPGGAGRPGAPAAGGFQRPAGGFAGRPGGGGRGRGPGGGTAGAFGRGGGKSKSRKSKRTKRAEFELREAPSLGGVSVPRGDGNTIVRLRRGASISDFADKIDASPGNLVTVLFHLGEMATATESLDEATFEVLGTELGYKIQVVSPEDEDRELLEGFDIDLDQELEDEDDDVLEIRPPVVTVMGHVDHGKTRLLDAIRNANVIEGEAGGITQHIGAYQVWAPHEGYERAITFIDTPGHEAFTAMRARGAQVTDIAILVVAADDGIMPQTVEALNHAQAANVPIVVAVNKVDKEGANPAKVRQQLTEYGLVAEEYGGDVMFVDVSALTGKGVEDLLEAVLLTADAGLDLRSNPNKDARGVAIEARLDKGRGAVATVLIQSGTLRVGDAIVAGTAYGRVRAMMDENGDAVHEAYPSRPVQVQGLSSVPGAGDTFLVTEEDRTARQIAEKREAVERNAQLAKARKRISLEDFTRALEEGKVESLNLIIKGDVSGAVEALEESLMKIEVDDSVQLRIIHRGVGAVTESDVNLATIDNAIIIGFNVRPDPKARARAAREGVDIRFYSVIYSALEEIESSLTGMLKPEFEEVQSGVAEIREVFRSSKFGNIAGVIVRSGTITRNAKARVIRDGVVVGDSLAIESLRRFKDDVSEVRTDFEAGIGLGKFNDIQIGDEIETIEMKEKPRV

Annotated regions:
phrase: VTVMGHVDHGKTRLLDAIRNANVIEGEAGGITQHIGAYQVWAPHEGYERAITFIDTPGHEAFTAMRARGAQVTDIAILVVAADDGIMPQTVEALNHAQAANVPIVVAVNKVDKEGANPAKVRQQLTEYGLVAEEYGGDVMFVDVSALTGKGVEDLLEAVL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: PVVTVMGHVDHGKTRLLDAIRNANVIEGEAGGITQHIGAYQVWAPHEGYERAITFIDTPGHEAFTAMRARGAQVTDIAILVVAADDGIMPQTVEALNHAQAANVPIVVAVNKVDKEGANPAKVRQQLTEYGLVAEEYGGDVMFVDVSALTGKGVEDLLEA
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: IRPPVVTVMGHVDHGKTRLLDAIRNANVIEGEAGGITQHIGAYQVWAPHEGYERAITFIDTPGHEAFTAMRARGAQVTDIAILVVAADDGIMPQTVEALNHAQAANVPIVVAVNKVDKEGANPAKVRQQLTEYGLVAEEYGGDVMFVDVSALTGKGVEDLLEAVLLTADAGLDL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: VVTVMGHVDHGKT
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: TFIDTPGHEA
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: RGAQVTDIAIL
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: IVVAVNKVD
type: DOMAIN
name: T_Tr_GTP-bd_dom
description: Translational (tr)-type GTP-binding domain

phrase: ASISDFADKIDASPGNLVTVLFHLGEMATATESLDEATFEVLGTELGY
type: DOMAIN
name: IF2_N
description: Translation initiation factor IF-2, N-terminal

phrase: MAKPRVHEIAAEIGVDSKTALAKLKEMGEFVKGPSSSIEPPVARKLKAA
type: DOMAIN
name: IF2_N
description: Translation initiation factor IF-2, N-terminal

phrase: ARGVAIEARLDKGRGAVATVLIQSGTLRVGDAIVAGTAYGRVRAMMDENGDAVHEAYPSRPVQVQGLSSVPGAGDTFL
type: DOMAIN
name: EF-G-like_DII
description: Elongation factor G-like, domain II

phrase: AKARKRISLEDFTRALEEGKVESLNLIIKGDVSGAVEALEESLMKIEVDDSVQLRIIHRGVGAVTESDVNLATIDNAIIIGFNVRPDPKARARAAREGVDIRFYSVIYSALEEI
type: DOMAIN
name: TIF_IF2_dom3
description: Translation initiation factor IF- 2, domain 3

phrase: ARGVAIEARLDKGRGAVATVLIQSGTLRVGDAIVAGTAYGRVRAMMDENGDAVHEAYPSRPVQVQGLSSVPGAGDTFLVTEEDRTARQIAEKR
type: DOMAIN
name: IF2_II
description: Translation initiation factor IF-2, domain II
Protein sequence:
MPVRRGHVAPQNTYLDTIIRKFEGQSRKFLIANAQMENCAIIYCNDGFCELFGYSRVEVMQRPCTCDFLTGPNTPSSAVSRLAQALLGAEECKVDILYYRKDASSFRCLVDVVPVKNEDGAVIMFILNFEDLAQLLAKSSSRSLTQRLLSHSFLGSEGSHSRPSGQGPGPGRGKYRTVSQIPQFTLNFVEFNLEKHRSGSTTEIEIIAPHKVVERTQNVTEKVTQVLSLGADVLPEYKLQAPRIHRGTILHYSPFKAVWDWLILLLVIYTAVFTPYSAAFLLSDQDESQRGTCGYTCSPLTVVDLIVDIMFVVDIVINFRTTYVNTNDEVVSHPRRIAVHYFKGWFLIDMVAAIPFDLLIFRTGSDETTTLIGLLKTARLLRLVRVARKLDRYSEYGAAVLFLLMCTFALIAHWLACIWYAIGNVERPYLEPKIGWLDSLGAQLGKQYNGSDPASGPSVQDKYVTALYFTFSSLTSVGFGNVSPNTNSEKVFSICVMLIGSLMYASIFGNVSAIIQRLYSGTARYHTQMLRVKEFIRFHQIPNPLRQRLEEYFQHAWSYTNGIDMNAVLKGFPECLQADICLHLHRALLQHCPAFRGASKGCLRALAVKFKTTHAPPGDTLVHLGDVLSTLYFISRGSIEILRDDVVVAILGKNDIFGEPASLHARPGKSSADVRALTYCDLHKIHRADLLEVLDMYPAFADTFWNKLEVTFNLRDADGGLQSTPRQAPGHQDPQGFFLNDSQSGAAPSLSISDTSALWPELLQQMPPSPPNPRQDLDCWHRELGFKLEQLQAQMNRLESRVSSDLSRILQLLQHPQGRPSYILGASASSDLASFPETSVTRSSESTLLVGHVPSAQTLSYGDLDDHIQTPRNFSPRTPHVAMAMDKTLVPSSEQEQPGGLLSPLASPLRPLEVPGLGGSRFPSLPEHLSSVPKQLEFQRHGSDPGFTRS

Annotated regions:
phrase: AFRGASKGCLRALAVKFKTTHAPPGDTLVHLGDVLSTLYFISRGSIEILRDDVVVAILGKNDIFGEPASLHARPGKSSADVRALTYCDLHKIHRADLLEVLDMYPAFADTFWNKLEVT
type: DOMAIN
name: cNMP-bd_dom
description: Cyclic nucleotide-binding domain

phrase: ENCAIIYCNDGFCELFGYSRVEVMQRPCTCDFLTGPNTPSSAVSRLAQALLGAEECKVDILYYRKDASSFRCLVDVVPVKNEDGAVIMFILNFED
type: DOMAIN
name: PAS
description: PAS domain

phrase: HAPPGDTLVHLGDVLSTLYFISRGSIEILRDDVVVAILGKNDIFGEPASLHARPGKSSADVRALTYCDLHKIHRADLLEVL
type: DOMAIN
name: cNMP-bd_dom
description: Cyclic nucleotide-binding domain

phrase: VWDWLILLLVIYTAVFTPYSAAFLLSDQDESQRGTCGYTCSPLTVVDLIVDIMFVVDIVINFRTTYVNTNDEVVSHPRRIAVHYFKGWFLIDMVAAIPFDLLIFRTGSDETTTLIGLLKTARLLRLVRVARKLDRYSEYGAAVLFLLMCTFALIAHWLACIWYAIGNVERPYLEPKIGWLDSLGAQLGKQYNGSDPASGPSVQDKYVTALYFTFSSLTSVGFGNVSPNTNSEKVFSICVMLIGSLMYASIFGNVSAIIQRLY
type: DOMAIN
name: Ion_trans_dom
description: Ion transport domain

phrase: AFRGASKGCLRALAVKFKTTHAPPGDTLVHLGDVLSTLYFISRGSIEILRDDVVVAILGKNDIFGEPASLHARPGKSSADVRALTYCDLHKIHRADLLEV
type: DOMAIN
name: cNMP-bd_dom
description: Cyclic nucleotide-binding domain

phrase: AFRGASKGCLRALAVKFKTTHAPPGDTLVHLGDVLSTLYFISRGSIEILRDDVVVAILGKNDIFGEPASLHARPGKSSADVRALTYCDLHKIHRADLLEVLDMYPAFADTF
type: DOMAIN
name: cNMP-bd_dom
description: Cyclic nucleotide-binding domain

phrase: MENCAIIYCNDGFCELFGYSRVEVMQRPCTCDFLTGPNTPSSAVSRLAQALLGAEECKVDILYYRKDASSFRCLVDVVPVKNEDGAVIMFILNFED
type: DOMAIN
name: PAS
description: PAS domain

phrase: IIYCNDGFCELFGYSRVEVMQRPCTCDFLTGPNTPSSAVSRLAQALLGAEECKVDILYYRKDASSFRCLVDVVPVKNEDGAVIMFILNFED
type: DOMAIN
name: PAS
description: PAS domain
Protein sequence:
MLGDGNGGMCTIPGFNQIQFEGFCRFIDQGLTEELSKFPKIEDDTDQEIEFQLFVETYHLVEPLIKERDAVYELLTYSSELYISAGLIWKSSRDMQKQTIFIGNIPLMNSLGTSIVNGIYRIVINQILQSPGIYYRSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLREILENVCYPEMFLSFLNEKEKKTIGSKENAILEFYQQFSCVGGDPVFSESLCKELHTKFFQQRCELGRIGRQNMNRRLNLDIPQHNTFLLPRDILAAADHLIGMKFGMGTLDDTNHLKNKRIRSVADLLQDQFGLALVRLESVVRRTICGAIRHKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTARTASFRMRDIHPSYYGRICPIDTSEGINVGLIGSLAIHARIGRGGSLESPFYEISERSNKGRMLYFSPSRDEYYMVAAGNSLALNRGIQEEQVVPARYRQEFLTLAWDQVHLRSIFPFQYFSIGASLIPFIEHNDANRALMSSNMQRQAVPLSQSERCIVGTGLERQASLDSGVTAIAEREGKIIYTNSDKIILSGSGDTLSIPLVMYQRSNKNTWMHQKPQVPRGKCIKKGQILADGAATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEMQTHVTSQGPERITNEIPHLEAHLLRNLDKNGIVMMGSWVEAGEILVGKLTPQMAEEESSYAPEERLLRAILGIQISTSKETCLKLPIGGRGRVIDVRWIQKRGGSSYNPETIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGFAGDLLERHYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRLFDGRTGDPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYARVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHLLQEMLTYKSDHIRARQGVLGTTILGGTIPKPEDAPESFRLLVRELRSLALELNHFLVSEKNFQINRKEA

Annotated regions:
phrase: GGQRVGEMEVWALEGFGVAHLLQEMLTYKSDHIRARQGVLGTTILGGTIPKPEDAPESFRLLVRELRSLALELNH
type: DOMAIN
name: RNA_pol_Rpb2_7
description: RNA polymerase Rpb2, domain 7

phrase: GDKVAGRHGNKG
type: CONSERVED_SITE
name: RNA_pol_bsu_CS
description: RNA polymerase, beta subunit, conserved site

phrase: AEREGKIIYTNSDKIILSGSGDTLSIPLVMYQRSNKNTWMHQKPQVPRGKCIKKGQILADGAATVGGELALGKNVLVAYMPWEGYNFEDAVLISERLVYEDIYTSFHIRKYEMQTHVTSQGPERITNEIPHLEAHLLRNLDKNGIVMMGSWVEAGEILVGKLTPQMAEEESSYAPEERLLRAILGIQISTSKETCLKLPIGGRGRVIDVRWIQKRGGSSYNPETIRVYILQKREIKVGDKVAGRHGNKGIISKILPRQDMPYLQDGRPVDMVFNPLGVPSRMNVGQIFECSLGFAGDLLERHYRIAPFDERYEQEASRKLVFSELYEASKQTANPWVFEPEYPGKSRLFDGRTGDPFEQPVIIGKPYILKLIHQVDDKIHGRSSGHYARVTQQPLRGRA
type: DOMAIN
name: DNA-dir_RNAP_su2_dom
description: DNA-directed RNA polymerase, subunit 2, hybrid-binding domain

phrase: QVLDRTNPLTQIVHGRKLSYLGPGGLTARTASFRMRDIHPSYYGRICPIDTSEGINVGLIGSLAIHAR
type: DOMAIN
name: RNA_pol_Rpb2_3
description: RNA polymerase Rpb2, domain 3

phrase: QSPGIYYRSELDHNGISVYTGTIISDWGGRLELEIDRKARIWARVSRKQKISILVLSSAMGSNLREILENVCYPEMFLSFLNEKEKKTIGSKENAILEFYQQFSCVGGDPVFSESLCKELHTKFFQQRCELGRIGRQNMNRRLNLDIPQHNTFLLPRDILAAADHLIGMKFGMGTLDDTNHLKNKRI
type: DOMAIN
name: RNA_pol_Rpb2_2
description: RNA polymerase Rpb2, domain 2
Protein sequence:
MLTQVLFEHPLNEKMRTWLRIEFLIQQLSVNLPVADHAGALHFFRNIADLLDVFERGEVRTELLKELERQQRKLQAWIEVPGVDQDRIEALRTELKNAGSILISAPRIGQFLREDRLIALVRQRLSIPGGCCSFDLPTLHIWLHMPQAMRDAQIETWLASLSPLNHALTLVLDLIRNSVPFRKQTSLNGFYQDNGEDADLLRLQLPLDSQLYPQISGHKSRFAIRFMPLDSENGLVPERLDFELACC

Annotated regions:
Protein sequence:
MHNILEVIYWNKCSYERKKKILSRPIISNRFLIRNKVKEIISNVKSFGDRALYNYTNVFDNINLKNIRVSEEDIVSSHLHVSKELKLAVEVAFKNIKKFHSKQNVGSFNLKVQDNIYCQQIIRPIESIGLYIPNGSAPLLSTVLMLAIPANIAGCKRIMLCSPPPIMNEILYACKICEIKDVFQIGGAQAIAALGCGTETI

Annotated regions: