nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MPELPEVETTKNGISPYLEGAIIEKIVVRQPKLRWMVSEELAQITQQKVIALSRRAKYLIIQLETGYMIGHLGMSGSLRVVEKGDLIDKHDHLDIVVNNGKVVRYNDPRRFGAWLWTEKLDEFPLFLKLGPEPLSEEFDSDYLWQKSRKKQTALKTFLMDNAVVVGVGNIYANETLFLCNLHPQKTAGSLTKAQCGQLVEQIKQVLSNAIQQGGTTLKDFLQPDGRPGYFVQELRVYGNKDKPCPTCGTKIESLVIGQRNSFYCPKCQKR

Annotated regions:
phrase: CPTCGTKIESLVIGQRNSFYCPKC
type: BINDING_SITE
name: DNA_glyclase_Znf_dom_DNA_BS
description: DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site

phrase: PELPEVETTKNGISPYLEGAIIEKIVVRQPKLRWMVSEELAQITQQKVIALSRRAKYLIIQLETGYMIGHLGMSGSLRVVEKGDLIDKHDHLDIVVNNGKVVRYNDPRRF
type: DOMAIN
name: FPG_cat
description: Formamidopyrimidine-DNA glycosylase, catalytic domain

phrase: LGPEPLSEEFDSDYLWQKSRKKQTALKTFLMDNAVVVGVGNIYANETLFLCNLHPQKTAGSLTKAQCGQLVEQIKQVLSNAIQQGGTTLK
type: DOMAIN
name: DNA_glyclase/AP_lyase_DNA-bd
description: DNA glycosylase/AP lyase, H2TH DNA-binding

phrase: LGPEPLSEEFDSDYLWQKSRKKQTALKTFLMDNAVVVGVGNIYANETLFLCNLHPQKTAGSLTKAQCGQLVEQIKQVLSNAIQQGGTTLKDF
type: DOMAIN
name: DNA_glyclase/AP_lyase_DNA-bd
description: DNA glycosylase/AP lyase, H2TH DNA-binding

phrase: RVYGNKDKPCPTCGTKIESLVIGQRNSFYCPKCQ
type: DOMAIN
name: Znf_DNA_glyclase/AP_lyase
description: Zinc finger, DNA glycosylase/AP lyase-type

phrase: PELPEVETTKNGISPYLEGAIIEKIVVRQPKLRWMVSEELAQITQQKVIALSRRAKYLIIQLETGYMIGHLGMSGSLRVVEKGDLIDKHDHLDIVVNNGKVVRYNDPRRFGAW
type: DOMAIN
name: FPG_cat
description: Formamidopyrimidine-DNA glycosylase, catalytic domain

phrase: MPELPEVETTKNGISPYLEGAIIEKIVVRQPKLRWMVSEELAQITQQKVIALSRRAKYLIIQLETGYMIGHLGMSGSLRVVEKGDLIDKHDHLDIVVNNGKVVRYNDPRRFGA
type: DOMAIN
name: FPG_cat
description: Formamidopyrimidine-DNA glycosylase, catalytic domain

phrase: KPCPTCGTKIESLVIGQRNSFYCPKCQK
type: DOMAIN
name: Znf_FPG/IleRS
description: Zinc finger, FPG/IleRS-type
Protein sequence:
MSSKATKTVKSKFDIINNQLRDDLIDFRSGDTIRVDVKIKEGYKFRIQSFEGLVIKTQGSGITYSVVVRKMSNGVFVERTFPLHSPIIDSVTLIKRGKVRRSRIYYIRKLSGKAARIKEIMPTKQAKEIK

Annotated regions:
phrase: LIKRGKVRRSRIYYI
type: CONSERVED_SITE
name: Ribosomal_bL19_CS
description: Large ribosomal subunit protein bL19, conserved site
Protein sequence:
MAQDTNNLIWLDMEMTGLNPDQDRIIEVAMIVTDSNLNVLAESPVLVIHQPDAILDGMDDWNKNTHGKSGLIEKVKNSTVSEAEAEQLLLEFMMQHVPERATPMCGNTIHQDRRFMARWMPKLEAYFHYRNLDVSTLKELCKRWRPEIAKGVVKRGKHEALADILESIEEMRYYREHFLKV

Annotated regions:
phrase: IWLDMEMTGLNPDQDRIIEVAMIVTDSNLNVLAESPVLVIHQPDAILDGMDDWNKNTHGKSGLIEKVKNSTVSEAEAEQLLLEFMMQHVPERATPMCGNTIHQDRRFMARWMPKLEAYFHYRNLDVSTLKELCKRWRPEIAKGVVKRGKHEALADILESIE
type: DOMAIN
name: Exonuclease_RNaseT/DNA_pol3
description: Exonuclease, RNase T/DNA polymerase III

phrase: NLIWLDMEMTGLNPDQDRIIEVAMIVTDSNLNVLAESPVLVIHQPDAILDGMDDWNKNTHGKSGLIEKVKNSTVSEAEAEQLLLEFMMQHVPERATPMCGNTIHQDRRFMARWMPKLEAYFHYRNLDVSTLKELCKRWRPEIAKGVVKRGKHEALADILESIEEMRYYREHFL
type: DOMAIN
name: Exonuclease_RNaseT/DNA_pol3
description: Exonuclease, RNase T/DNA polymerase III
Protein sequence:
MVRSLIRRVLGRQDVGVSNAPLELPPSDSRERARAMVMGLQDQICAGLEALDGEGRFVEESWVRHEGGGGRSRVMREGRVFEQGGVNFSEVQGEELPPSILKQRPEAKGHPWFATGTSMVLHPRNPYIPTVHLNYRYFEAGPVWWFGGGADLTPYYPFLDDARHFHRTHQAACDSVHPDLHKVFKPWCDEYFYLKHRGETRGVGGIFYDYQDANGTLYKGQDPSGPAAQVSASLGARPLSWEQLFSLGQANGRAFLPAYAPIVEKRHPMAYGDRERDFQLYRRGRYVEFNLVWDRGTIFGLQTNGRTESILMSLPPLVRWEYGYTAEAGSREALLTELFTKPQDWLGDASLDERCRPHGAIN

Annotated regions:
phrase: KPWCDEYFYLKHRGETRGVGGIFY
type: CONSERVED_SITE
name: Coprogen_oxidase_CS
description: Coproporphyrinogen III oxidase, conserved site
Protein sequence:
MGIPKFFRYISERWPMILQLIEGTQIPEFDNLYLDMNSFIHTCTHGNDDEGVTQKMSDEELYSRIFTYIDHLFLMIKPKKVFYMSIDGVAPRAKMNQQRSRRFRTAMDTEKALQKAMDEGEEIPKGDAFDSNCITPGTEFMAQLTRNLNYYIHDKVTNDANWRDIEVILSGHEVPGEGEHKIMDFIRNITAQEDYDVNTRHCIYGLDADLIMLGLSTHAPHFALLREEVTFGRRNNSRNKNLEEQNFYLLHLSLLREYLELEFKEIGDDLQFEFDFENILDDFILVMFVIGNDFLPNLPDLHLNKGAFPVLLQTFKEALLHVDGYINERGQINFKRLKVWLDYLSQFELMNFENDDIDVAWFNQQLENISLEGERKRQRMGKKLLIKQQKKLVGMVKPWLLKEINKEIPANLEDSDIPQLPLSVDTETLKENLDFLKKFALDLGLIIVHSKSKDTYSLKLDIDAINPSETDEQRQNRINETRKTIKKYQSAIIVEDKEELEEEKDIYNERFENWKAEYYRSKFGIKRDEPERIVEIANNYVEGLQWVLYYYYQGCPSWSWYYHFHYAPRISDLAKGLDQIIKFEQGSPLTPFQQLMAVLPERSKNLLPAAYRPLMYDPKSPILDFYPSEVQLDKNGKTADWEAVVLLPFVDENRLIEATNHCLAKLSPEEKQRNSFGKNLTFMYNPQVDNVYRTTLKGIFSDIQHNHCVALEYQPKPMEGKQFRYGLLPNAKLKTQLLAGFPTLYSLPFTNSLEYNESYVFQQPSRQQ

Annotated regions:
phrase: MGIPKFFRYISERWPMILQLIEGTQIPEFDNLYLDMNSFIHTCTHGNDDEGVTQKMSDEELYSRIFTYIDHLFLMIKPKKVFYMSIDGVAPRAKMNQQRSRRFRTAMDTEKALQKAMDEGEEIPKGDAFDSNCITPGTEFMAQLTRNLNYYIHDKVTNDANWRDIEVILSGHEVPGEGEHKIMDFIRNITAQEDYDVNTRHCIYGLDADLIMLGLSTHAPHFALLRE
type: DOMAIN
name: Xrn1_N
description: Xrn1, N-terminal

phrase: GLLPNAKLKTQLLAGFPTLYSLPFTNSLEYNESYVFQQPSRQ
type: DOMAIN
name: XRN1_D1
description: 5'-3' exoribonuclease 1, D1 domain

phrase: FDFENILDDFILVMFVIGNDFLPNLPDLHLNKGAFPVLLQTFKEALLHVDGYINERGQINFKRLKVWLDYLSQFELMNFENDDIDVAWFNQQLENISLEGERKRQRMGKKLLIKQQKKLVGMVKPWLLKEINKEIPANLEDSDIPQLPLSVDTETLKENLDFLKKFALDLGLIIVHSKSKDTYSLKLDIDAINPSETDEQRQNRINETRKTIKKYQSAIIVEDKEELEEEKDIYNERFENWKAEYYRSKFGIKRDEPERIVEIANNYVEGLQWVLYYYYQGCPSWSWYYHFHYAPRISDLAKGLDQIIKFEQGSPLTPFQQLMAVLPERSKNLLPAAYRPLMYDPKSPILDFYPSEVQLDKNGKTADWEAVVLLPFVDENRLIEATNHCLAKLSPEEKQRNSFGKNLTFMY
type: DOMAIN
name: Xrn1_helical
description: Xrn1, helical domain
Protein sequence:
MADTTSKEVPLHSVQVEALVVMKIVKACAATYPTTATGSIVGMDSNGTLQITNSFPFPTADVAASDSHPNDHMAASNIAAAAPRSKANIVYQSEMIKMLKEVNVDANNVGWYTSANMGNFINTSLIENQFFYQKEPNERTVALVHDVSRSAQGALSLRAFRLSPNFMTAYKEGKFTTENMQKSKLTYKDILVELPIIVHNSHLLTSFLHQMPVELPKKELDFPASLADLTRNTPPTPLYPNLESLDLSIDPYLERTCDMLLDSIETHYTELNNFQYFQRQLTREQAKVTAWKTKRAAENASRATQKLAPLPEDEWERLFKLPTEPSRLEGMLNARQVDQYSRQVDGFTASITGKMFAVKSNLLPEQS

Annotated regions:
phrase: SVQVEALVVMKIVKACAATYPTTATGSIVGMDSNGTLQITNSFPFPTADVAASDSHPNDHMAASNIAAAAPRSKANIVYQSEMIKMLKEVNVDANNVGWYTSANMGNFINTSLIENQFFYQKEPNERTVALVHDVSRSAQGALSLRAFRLSP
type: DOMAIN
name: JAMM/MPN+_dom
description: JAB1/MPN/MOV34 metalloenzyme domain

phrase: HSVQVEALVVMKIVKACAATYPTTATGSIVGMDSNGTLQITNSFPFPTADVAASDSHPNDHMAASNIAAAAPRSKANIVYQSEMIKMLKEVNVDANNVGWYTSANMGNFINTSLIENQFFYQK
type: DOMAIN
name: JAMM/MPN+_dom
description: JAB1/MPN/MOV34 metalloenzyme domain

phrase: VQVEALVVMKIVKACAATYPTTATGSIVGMDSNGTLQITNSFPFPTADVAASDSHPNDHMAASNIAAAAPRSKANIVYQSEMIKMLKEVNVDANNVGWYTSANMGNFINTSLIENQFFYQKEPNERTVALVHDVSRSAQGALSLRAFRLSPN
type: DOMAIN
name: MPN
description: MPN domain

phrase: AQGALSLRAFRLSPNFMTAYKEGKFTTENMQKSKLTYKDILVELPIIVHNSHLLTSFLHQMPVELPKKELDFPASLADLTRNTPPTPLYPNLESLDLSIDPYLERTCDMLLDSIETHYTELNNFQYFQRQLTREQAKVTAWKTKRAAENASRATQKLAPLPEDEWERLFKLPTEPSRLEGMLNARQVDQYSRQVDGFTASITGKMFAV
type: DOMAIN
name: eIF3h_C
description: eIF3h, C-terminal
Protein sequence:
MAPFPEEVDVFTAPHWRMKQLVGLYCDKLSKTNFSNNNDFRALLQSLYATFKEFKMHEQIENEYIIGLLQQRSQTIYNVHSDNKLSEMLSLFEKGLKNVKNEYEQLNYAKQLKERLEAFTKDFLPHMKEEEEVFQPMLMEYFTYEELKDIKKKVIAQHCSQKDTAELLRGLSLWNQAEERQKFFKYSVDEKSDKEAEVSEQSTGITHLPPEVMVSIFSYLNPQELCRCSQVSTKWSQLAKTGSLWKHLYPVHWARGDWYSGPAAELDTEPDEEWVKSRRDESRAFQEWDEDADIDESEESGEESIAISIAQMEKRLLHGLIHNVLPYVGTSVKTLVLAYSSAVSSKMVRQILELCPNLEHLDLTQTDISDSAFDSWSWLGCCQSLRHLDLSGCEKITDVALEKISRALGILTTHESGLLKTSTSKVTSTTWKNKDITMQSFKQSACLHDVTNKDIGEEVDNEHPWTKPISSDDFTSPYVWMLDAEDLADIEDAVEWRHRNVESLCVMETASNFSCPSSACYSKDIVGLRTSVCWQQHCASPAFAYCGHSYCCTGTALRTMSALPESSALCRKAPRTRLLREKDLIYSGSEKSDQETGRVLLFLSLSGCYQITDHGLRVLTLGGGLPYLEHLNLSGCLTVTGAGLQDLVSACPSLNDEYFYYCDNINGPHADTASGCQNLQCGFRACCRSGE

Annotated regions:
phrase: CQSLRHLDLSGCEKITDVALEKISR
type: REPEAT
name: Leu-rich_rpt_Cys-con_subtyp
description: Leucine-rich repeat, cysteine-containing subtype

phrase: LPYLEHLNLSGCLTVTGAGLQDLVS
type: REPEAT
name: Leu-rich_rpt_Cys-con_subtyp
description: Leucine-rich repeat, cysteine-containing subtype

phrase: CPNLEHLDLTQTDISDSAFDSWSW
type: REPEAT
name: Leu-rich_rpt_Cys-con_subtyp
description: Leucine-rich repeat, cysteine-containing subtype

phrase: GRVLLFLSLSGCYQITDHGLRVLTL
type: REPEAT
name: Leu-rich_rpt_Cys-con_subtyp
description: Leucine-rich repeat, cysteine-containing subtype

phrase: LPPEVMVSIFSYLNPQELCRCSQVSTKWSQLAKTGSLWKH
type: DOMAIN
name: F-box_dom
description: F-box domain

phrase: CQSLRHLDLSGCEKITDVALEKI
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: CPNLEHLDLTQTDISD
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: EVDVFTAPHWRMKQLVGLYCDKLSKTNFSNNNDFRALLQSLYATFKEFKMHEQIENEYIIGLLQQRSQTIYNVHSDNKLSEMLSLFEKGLKNVKNEYEQLNYAKQLKERLEAFTKDFLPHMKEEEEVFQPMLMEYFTYEELKDIKKKVIAQHC
type: DOMAIN
name: Hr_FBXL5
description: FBXL5-like, hemerythrin-like domain

phrase: ITHLPPEVMVSIFSYLNPQELCRCSQVSTKWSQLAKTGSLWKHL
type: DOMAIN
name: F-box_dom
description: F-box domain

phrase: STGITHLPPEVMVSIFSYLNPQELCRCSQVSTKWSQLAKTGSLWKH
type: DOMAIN
name: F-box_dom
description: F-box domain

phrase: VDVFTAPHWRMKQLVGLYCDKLSKTNFSNNNDFRALLQSLYATFKEFKMHEQIENEYIIGLLQQRSQTIYNVHSDNKLSEMLSLFEKGLKNVKNEYEQLNYAKQLKERLEAFTKDFLPHMKEEEEVFQPM
type: DOMAIN
name: Hemerythrin-like
description: Hemerythrin-like
Protein sequence:
MAEILERSGYLVKVRVEVPADRVKASYEALLKDLASRVRVPGFRPGKAPLKVVEARLGREALLQDLKERLVEETYPEAVRELGLSPVAARVVEQDLSEGEGFRYVAEVENYPEVRLPDWRSFALEVSPPEVTEEMVEKALEELRQRYAELVPVEREAQEKDHLFVRTEEGAEFPIDLAKALPHVREALLGKKAGDVVMVPVLNDKGEKVREVRTEVLEVKTLKLPELDEEFAKTLEAESLEDLKNRVRESLKRQAERAYEEARERAFLEKLAEGLEVEIPPSMLRAEERHLLEHLAEDLYRQGISLEAYLEALKVKGELEKFQEDLRKEAEKRVRIALAREKLAEELNPEVSEEEWQAYLQAAARAYGVSVQDLRRQFGEEGLARLKERLRQDKAVQEALKVLG

Annotated regions:
phrase: SLEDLKNRVRESLKRQAERAYEEARERAFLEKLAEGLEVEIPPSMLRAEERHLLEHLAEDLYRQGISLEAYLEALKVKGELEKFQEDLRKEAEKRVRIALAREKLAEELNPEVSEEEWQAYLQAAARAYGVSVQDLRRQFGEEGLARLKERLRQDKAVQEA
type: DOMAIN
name: Trigger_fac_C
description: Trigger factor, C-terminal

phrase: SGYLVKVRVEVPADRVKASYEALLKDLASRVRVPGFRPGKAPLKVVEARLGREALLQDLKERLVEETYPEAVRELGLSPVAARVVEQDLSEGEGFRYVAEVENYPEVRLPDWRSFALEVSPPEVTEEMVEKALEE
type: DOMAIN
name: Trigger_fac_ribosome-bd_bac
description: Trigger factor, ribosome-binding, bacterial
Protein sequence:
MKIEKHITYNNQSFSSLTDDSITASEDLSSLFVKTTMNQKYHDSIAHLPSINENELVNYFQITPKLIGITGTNGKTTTSALIAHSLQKLGYQVALLGTRGFFINGERKREKGLTTPTILELYSLIEEARECDYFVMEVSSHAITQNRILGLDFALKALSNITRDHLDFHKDLQEYIEVKNSFFAGKGLHIINADDLNAKVEHKITYSLTQKADFYACDYQLSPTITSTICTQDEVGTLHLLMCGRHNLYNALCSIASLLSLTHHSLQEVLESLEDFAGVEGRMEIVSHSPLIIVDFAHTDDGMEKILESFEGKKIAVLFGAGGDRDRTKRPKMGEVAQKYAQKIYITSDNPRSENPQNIIAEILQGITQEEKIKSINPIREQAIERAIKELESDEILFVLGKGDETYQIIGHQKIHFDDREVIADVLKSLEKRK

Annotated regions:
phrase: ITGTNGKTTTSALIAHSLQKLGYQVALLGTRGFFINGERKREKGLTTPTILELYSLIEEARECDYFVMEVSSHAITQNRILGLDFALKALSNITRDHLDFHKDLQEYIEVKNSFFAGKGLHIINADDLNAKVEHKITYSLTQKADFYACDYQLSPTITSTICTQDEVGTLHLLMCGRHNLYNALCSIA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central

phrase: GRMEIVSHSPLIIVDFAHTDDGMEKILESFEGKKIAVLFGAGGDRDRTKRPKMGEVAQKYAQKIYITSDNPRSENPQNIIAEILQGITQEEKIKSINPIREQAIERAIKELESDEILFVLGK
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal
Protein sequence:
MATERHYSPLDRLLLQADTAMRTLLPFSGQPSRPSPAIVQPDVELDESQTRHIAGLMRINHTGEVCAQALYQGQALTAKLPQVRKAMEHAAEEEIDHLAWCEQRIRQLGSHPSVLNPLFYGMSFGIGALAGMVSDKVSLGFVAATEHQVCKHLDEHLEQIPHEDEKSRAILEQMRVDEEQHADSALEAGGYRFPAPVRFGMSMLAKVMTKSTYRI

Annotated regions:
Protein sequence:
MNVFFMFSLLFLAALGSCADDRNPLEECFRETDYEEFLEIARNGLKATSNPKHVVIVGAGMSGLSAAYVLAGAGHEVTVLEASERAGGRVRTYRNDEEGWYANLGPMRLPEKHRIVREYIRKFNLQLNEFSQENDNAWHFVKNIRKTVGEVKKDPGVLKYPVKPSEEGKSAEQLYEESLRKVEKELKRTNCSYILNKYDTYSTKEYLIKEGNLSPGAVDMIGDLMNEDAGYYVSFIESMKHDDIFAYEKRFDEIVDGMDKLPTSMYRAIEEKVHFNAQVIKIQKNAEEVTVTYHTPEKDTSFVTADYVIVCTTSRAARRIKFEPPLPLKKAHALRSVHYRSGTKIFLTCTKKFREDEGIHGGKSTTDLPSRFIYYPNHNFTSGVGVIIAYGIGDDANFFQALDLKDCGDIVINDLSLIHQLPREEIQTFCYPSMIQKWSLDKYAMGGITTFTPYQFQHFSEALTSHVDRIYFAGEYTAHAHGWIDSSIKSGLTAARDVNRASENPSGIHLSNDDEL

Annotated regions:
phrase: MSGLSAAYVLAGAGHEVTVLEASERAGGRVRTYRNDEEGWYANLGPMRLPEKHRIVREYIRKFNLQLNEFSQENDNAWHFVKNIRKTVGEVKKDPGVLKYPVKPSEEGKSAEQLYEESLRKVEKELKRTNCSYILNKYDTYSTKEYLIKEGNLSPGAVDMIGDLMNEDAGYYVSFIESMKHDDIFAYEKRFDEIVDGMDKLPTSMYRAIEEKVHFNAQVIKIQKNAEEVTVTYHTPEKDTSFVTADYVIVCTTSRAARRIKFEPPLPLKKAHALRSVHYRSGTKIFLTCTKKFREDEGIHGGKSTTDLPSRFIYYPNHNFTSGVGVIIAYGIGDDANFFQALDLKDCGDIVINDLSLIHQLPREEIQTFCYPSMIQKWSLDKYAMGGITTFTPYQFQHFSEALTSHVDRIYFAGEYTAHAHGWIDSSIKSGLTAARD
type: DOMAIN
name: Amino_oxidase
description: Amine oxidase
Protein sequence:
MKLIVATHNEGKLVEIRRILAERLGADGQSVELVSAGSLGLPDPVETGVTFEENALLKARDVAQRTGEAAIADDSGLIVDVMGQAPGILSARWSGRHGDDEANNALLLAQIEDIPDDKRTARFRCAAALVMPLADGEMREVVRIGDMKGRIIRQARGEHGFGYDPLFVPDDQPRREGEGATELTSAEMTAEEKNAISHRGKALRALAVDIEEILKAAD

Annotated regions:
Protein sequence:
MTAAAPTLAQALDEATGQLTGAGITADAARADTRLLAAHACQVAPGDLDTCLAGPVPPRFWHYVRRRLTREPAERIVGHAYFMGHRFDLAPGVFVPKPETEEITRDAIARLEALVRRGTTAPLVVDLCAGPGTMAVTLARHVPAARVLGIELSQAAARAARRNARGTGARIVQGDARDAFPELSGTVDLVVTNPPYIPIGLRTSAPEVLEHDPPLALWAGEEGLGMIRAMERTAARLLAPGGVLLLEHGSYQLASVPALFRATGRWSHASSRPTCNDGCLTAVRNHTCAPPA

Annotated regions:
phrase: VVDLCAGPGTMAVTLARHVPAARVLGIELSQAAARAARRNARGTGARIVQGDARDAFPELSGTVDLVV
type: DOMAIN
name: Methyltransf_25
description: Methyltransferase domain 25

phrase: QALDEATGQLTGAGITADAARADTRLLAAHACQVAPGDLDTCLAGPVPPRFWHYVRRRLTREPAERIV
type: DOMAIN
name: PrmC_N
description: Release factor glutamine methyltransferase, N-terminal domain

phrase: VVTNPP
type: CONSERVED_SITE
name: DNA_methylase_N6_adenine_CS
description: DNA methylase, N-6 adenine-specific, conserved site
Protein sequence:
MVHMRDVWVNWFEGEENGYNVCDFFEWRSDDRIEVLDQVVVVRVSPPLFDYIENQMSDLPEDLLQDVYQKSYLRKNMSRIQLDYAFVASDGERIIAVDTMGYKTPIRKSRLTPRQEQLVYELLQNESDICYDLQGHEPKKEHHILSPDPMEMKGLTRKERQLKQLLYMALDQLFTSGNEAEIRYWLTEWEPDRYDEIQGMDHHQAWETLYRDVRQGWSEHHYHFCESLIKGQAFFEKLWELEHGESVK

Annotated regions:
Protein sequence:
MKINKKNLIWIDLEMTGLNPKVHRIIEIATLITDTNLNIIAEGPVIPIYQKKEHILVMDEWNKRIHENNGLIKRVEKSLYNEQKAEHETILFLKKWVPIQVSPMCGNSIAQDRRFLFQYMPHLENYFHYRYIDVSTIKELAYRWNPSILDKFKKNHYHKALEDIRESVVELNFYKKNFLKFKKK

Annotated regions:
phrase: NLIWIDLEMTGLNPKVHRIIEIATLITDTNLNIIAEGPVIPIYQKKEHILVMDEWNKRIHENNGLIKRVEKSLYNEQKAEHETILFLKKWVPIQVSPMCGNSIAQDRRFLFQYMPHLENYFHYRYIDVSTIKELAYRWNPSILDKFKKNHYHKALEDIRESVVELNFYKKNFL
type: DOMAIN
name: Exonuclease_RNaseT/DNA_pol3
description: Exonuclease, RNase T/DNA polymerase III

phrase: IWIDLEMTGLNPKVHRIIEIATLITDTNLNIIAEGPVIPIYQKKEHILVMDEWNKRIHENNGLIKRVEKSLYNEQKAEHETILFLKKWVPIQVSPMCGNSIAQDRRFLFQYMPHLENYFHYRYIDVSTIKELAYRWNPSILDKFKKNHYHKALEDIRES
type: DOMAIN
name: Exonuclease_RNaseT/DNA_pol3
description: Exonuclease, RNase T/DNA polymerase III
Protein sequence:
MRVKETQMNWPNLWRWGTLILGLVIICSASDKLWVTVYYGVPVWRDADTTLFCASDAKVHETEVHNVWATHACVPTDPNPQEMHLENVTENFNMWKNNMAEQMQEDVISLWDESLKPCVKLTPLCVTLNCTNANLTNVNYTGSYPNIIGNVTDEVKNCSFNMTTEIRDKKQRVQALFYKLDIVQIGNDSSSEYRLINCNTSVIKQACPKISFDPIPIHYCAPAGYAIIKCNEKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEEKIIIRSENITNNAKTIIVHLNESVEISCTRPSNNTRTSIRIGPGQLFYRTGDIIGNPRQAYCEINGTKWNKTLTQVTEKLKEHFANKTINFQPPSGGDPEITMHHFNCRGEFFYCNTTKLFNSTNGTMGGLNDTIILPCKIKQIVNMWQGVGQVMYAPPIRGIIKCTSNITGILLTRDGDGGESNMTEIFRPGGGNIKDNWRNELYKYKVVQIEPLGVAPTRAKRRVVEREKRAVGIGAMIFGFLGAAGSTMGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQRMLQLTVWGIKQLQARVLAVERYLKDQQFLGLWGCSGKIICTTAVPWNSTWSNKTYEEIWNNMTWIEWEREISNYTNQIYEIITESQNQQDRNEKDLLELDKWASLWNWFDITNWLWYIKIFIMIVGGLIGLRIIFAVLSLVKRVRQGYSPLSFQTLPHHQREPNRPERIEEGGGEQDRDRSVRLVTGFLALAWDDLRSLFLFSYHRLRDFSL

Annotated regions:
phrase: LWVTVYYGVPVWRDADTTLFCASDAKVHETEVHNVWATHACVPTDPNPQEMHLENVTENFNMWKNNMAEQMQEDVISLWDESLKPCVKLTPLCVTLNCTNANLTNVNYTGSYPNIIGNVTDEVKNCSFNMTTEIRDKKQRVQALFYKLDIVQIGNDSSSEYRLINCNTSVIKQACPKISFDPIPIHYCAPAGYAIIKCNEKNFNGTGPCKNVSSVQCTHGIKPVVSTQLLLNGSLAEEKIIIRSENITNNAKTIIVHLNESVEISCTRPSNNTRTSIRIGPGQLFYRTGDIIGNPRQAYCEINGTKWNKTLTQVTEKLKEHFANKTINFQPPSGGDPEITMHHFNCRGEFFYCNTTKLFNSTNGTMGGLNDTIILPCKIKQIVNMWQGVGQVMYAPPIRGIIKCTSNITGILLTRDGDGGESNMTEIFRPGGGNIKDNWRNELYKYKVVQIEPLGVAPTRAKRRVVEREK
type: DOMAIN
name: HIV1_Gp120
description: Human immunodeficiency virus 1, envelope glycoprotein Gp120

phrase: MGAASITLTVQARQLLSGIVQQQSNLLRAIEAQQRMLQLTVWGIKQLQARVLAVERYLKDQQFLGLWGCSGKIICTTAVPWNSTWSNKTYEEIWNNMTWIEWEREISNYTNQIYEIITESQNQQDRNEKDLLELDKWASLWNWFDITNWLWYIKIFIMIVGGLIGLRIIFAVLSLVKRVRQGYSPLSFQTLP
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: VQARQLLSGIVQQQSNLLRAIEAQQRMLQLTVWGIKQLQARVLAVERYLKDQQFLGLWGCSGKIICTTAVPWNSTWSNKTYEEIWNNMTWIEWEREISNYTNQIYEIITESQNQQDRNEKDLLELD
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MFDFAWSEIAVIGVVALVVIGPKDIPGAVRGVARMVRKARSMAAEFQGQMDQMMKEADLGDVRETFNDLRGVNLRQQLSRTLDPDGSMRSTFDNNPMAPSPAPMIMGGDEAHMVEERPFHSLSVMDESHMASEWTREKTVSSETARRAATAPAFIPPGEAFRSARRAPAFIPPADQG

Annotated regions:
Protein sequence:
MVEVRYLGHSAVLLTDGKTRIVIDPFLTGNPMAALGVGEVQADLILVTHAHGDHFGDSVALSKKGGVVVSTFEIATYAEKHGAKSVPMNLGGTYRFEGGWLKWVPAWHSSSFPDGTYGGMPMGVVVELGGKRIYHAGDTALFSDMRLIGEMGLDLALLPIGDHFTMGPEDALKALELLRPKKVVPIHYNTFPPIRQDGEAFAQRAREKGVEGHALKPGEVLRLD

Annotated regions:
phrase: TRIVIDPFLTGNPMAALGVGEVQADLILVTHAHGDHFGDSVALSKKGGVVVSTFEIATYAEKHGAKSVPMNLGGTYRFEGGWLKWVPAWHSSSFPDGTYGGMPMGVVVELGGKRIYHAGDTALFSDMRLIGEMGLDLALLPIGDHFTMGPEDALKALELLRPKKVVPIH
type: DOMAIN
name: Metallo-B-lactamas
description: Metallo-beta-lactamase

phrase: GHSAVLLTDGKTRIVIDPFLTGNPMAALGVGEVQADLILVTHAHGDHFGDSVALSKKGGVVVSTFEIATYAEKHGAKSVPMNLGGTYRFEGGWLKWVPAWHSSSFPDGTYGGMPMGVVVELGGKRIYHAGDTALFSDMRLIGEMGLDLALLPIGDHFTMGPEDALKALELLRPKKVVPI
type: DOMAIN
name: Metallo-B-lactamas
description: Metallo-beta-lactamase
Protein sequence:
MLSERQAKILKVIVSEYIKTNQAVSSKRIQELLNIKVSSATIRNDSAALEEMNFLEKQHTSSGRVPSTKGYRYYVDHLMEFDDYNESLKENLKSILFQRGTKIENVLEQASQIISEMTKMTAIVTKQNLNSELMVKKIDLIPLSETMASVIFILSNGEMQNQLFNLKDISLSDLSISIKIFSDCLVDTPVKEIENNISLIRPNLETTVKNYDLILETFMSNILQTKESKKEIVGMKNMLENPEFNDTDKLRKVINIMENMSPFDWFDVSYSSNQKMIQISTKIGEEISEDLSDISIVETAIKTEQGSTMLTLVGPKRVDYSQANQLINLIVEIINGDDHKNE

Annotated regions:
phrase: MLSERQAKILKVIVSEYIKTNQAVSSKRIQELLNIKVSSATIRNDSAALEEMNFLEKQHTSSGRVPSTKGY
type: DOMAIN
name: WHTH_HrcA_DNA-bd
description: Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain

phrase: ENVLEQASQIISEMTKMTAIVTKQNLNSELMVKKIDLIPLSETMASVIFILSNGEMQNQLFNLKDISLSDLSISIKIFSDCLVDTPVKEIENNISLIRPNLETTVKNYDLILETFMSNILQTKESKKEIVGMKNMLENPEFNDTDKLRKVINIMENMSPFDWFDVSYSSNQKMIQISTKIGEEISEDLSDISIVETAIKTEQGSTMLTLVGPKRVDYS
type: DOMAIN
name: HrcA_C
description: Heat-inducible transcription repressor HrcA, C-terminal
Protein sequence:
MPYLLLFALLFVLNTPLARAASCPHWNPQQAKAEVAQLRATLARWDEHYHRQGIALVADELYDQSHERLNHLQQCFAVGTSPSPLASARGPVPHPVPHTGVDKLADRQAVARWMTGKTGVWVQPKVDGVAVSLTYQQGRLVQLTSRGDGVHGHDWSRHIPQLGAVTRQLPEAVDLHLQGELYLRLDEHVQAKAGSANARGTVAGLLARKQLTGAQGNAIGLFVWGWPHGPEQQAERLAQLARLGFPDSQLYSIAIDTLEDAAHWREHWYRSALPFATDGVILRQGSRPPAERWQAKAPYWIAAWKYPYAQALAEVRDVRFRVGRTGRVTPVLHVQPVTLDDRRITQVSLGSLARWQRLDIRPGDQVAISLAGLTIPRLEHVVHRAVERQPITAPAPDQHHAHSCWQASEGCDEQFIARLTWLGGKQGLALPRTGPGTWRRLVEAGLVTSMTDWLQLDAERLQQAPGISRLTATQMLGSFDQARSRPFDQWLRALGVPIGKHLPLTGNWQALASRSAGQWQTVPGIGAKRSRQLVEFFAASEVQAIAAQLAEAGIEGFRTPPQRIEQ

Annotated regions:
phrase: VGRTGRVTPVLHVQP
type: CONSERVED_SITE
name: DNA_ligase_CS
description: NAD-dependent DNA ligase, conserved site

phrase: AEVRDVRFRVGRTGRVTPVLHVQPVTLDDRRITQVSLGSLARWQRLDIRPGDQVAISLAGLTIPRLEHVVHRA
type: DOMAIN
name: NAD_DNA_ligase_OB
description: NAD-dependent DNA ligase, OB-fold

phrase: QAKAEVAQLRATLARWDEHYHRQGIALVADELYDQSHERLNHLQQCFAVGTSPSPLASARGPVPHPVPHTGVDKLADRQAVARWMTGKTGVWVQPKVDGVAVSLTYQQGRLVQLTSRGDGVHGHDWSRHIPQLGAVTRQLPEAVDLHLQGELYLRLDEHVQAKAGSANARGTVAGLLARKQLTGAQGNAIGLFVWGWPHGPEQQAERLAQLARLGFPDSQLYSIAIDTLEDAAHWREHWYRSALPFATDGVILRQGSRPPAERWQAKAPYWIAAWKYPYAQALAEVRDVRFRVGRTGRVTPVLHVQPVTLDDRRITQVSLGSLARWQRLDIRPGDQVAISLAGLTIPRLEHVVHRAVERQPITAPAPDQHHAHSCWQASEGCDEQFIARLTWLGGKQ
type: DOMAIN
name: DNAligase_N
description: NAD-dependent DNA ligase, N-terminal

phrase: TGVWVQPKVDGVAVSLTYQQGRLVQLTSRGDGVHGHDWSRHIPQLGAVTRQLPEAVDLHLQGELYLRLDEHVQAKAGSANARGTVAGLLARKQLTGAQGNAIGLFVWGWPHGPEQQAERLAQLARLGFPDSQLYSIAIDTLEDAAHWREHWYRSALPFATDGVILRQGSRPPAERWQAKAPYWIAAWKY
type: DOMAIN
name: DNAligase_adenylation
description: NAD-dependent DNA ligase, adenylation
Protein sequence:
MSDRLAVLPQYLIPKQALTVLAGKLASAKAGGLTTSVIRWFVRRYNVNMTEAANPDIASYKSFNEFFTRPLKDGARPAADADFLCPVDGAISQYGTIDRDQIFQAKGHSYSTTALVGGDRKLAEQFENGSFATLYLSPRDYHRIHMPCDGKLTRMIYVPGALFSVNPTTARGVPGLFARNERVICVFESEFGSFVLTLVGATIVGSMATVWHGTINPPRPGVIREWRYDEQNIRLKKGQEMGRFLLGSTVVMLFPKNTLAFNPDWSPSRAIRMGEQMGSNAN

Annotated regions:
Protein sequence:
MGTGRRKRAVAQVKLVAGEGKLIINGKPGFDYLHNNATAILSIQGPFQLFKLQKKFDTIVKVHGGGLSAQADAIKLGVARALCEINTSHRPVLKSNGYLTRDARIVERKKAGLKKARKAPQFSKR

Annotated regions:
phrase: GGGLSAQADAIKLGVARA
type: CONSERVED_SITE
name: Ribosomal_uS9_CS
description: Small ribosomal subunit protein uS9, conserved site
Protein sequence:
MGLPWYRVHTVVLNDPGRLIAVHIMHTALVSGWAGSMALYELAVFDPSDPILDPMWRQGMFVIPFMTRLGIKDSWGGWSITGETGSNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLDVFCDSRTGKPSLDLPKIFGIHLFLSGAACFGFGAFHVTGLYGPGIWVSDPYGLTGKIQPVNPAWGAEGFDPFVPGGIASHHIAAGILGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFIVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIDRRVRAGLAENLSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGAMDNGDGIAVGWLGHPIFKDKNGHELFVRRMPTFFETFPVVLVDEEGIVKADVPFRRAESKYSVEQVGVTVEFYGGELDGVSFGDPAIVKKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRQVV

Annotated regions:
Protein sequence:
MQAPGRGPLGLRLMMPGRRGALREPGGCGSCLGVALALLLLLLPACCPVRAQNDTEPIVLEGKCLVVCDSSPSADGAVTSSLGISVRSGSAKVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHVVKVYNRQTIQVSLMQNGYPVISAFAGDQDVTREAASNGVLLLMEREDKVHLKLERGNLMGGWKYSTFSGFLVFPL

Annotated regions:
phrase: AFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHVVKVYNRQTIQVSLMQNGYPVISAFAGDQDVTREAASNGVLLLMEREDKVHLKLERGNLMGGWKYSTFSGFL
type: DOMAIN
name: C1q_dom
description: C1q domain

phrase: VRSGSAKVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHVVKVYNRQTIQVSLMQNGYPVISAFAGDQDVTREAASNGVLLLMEREDKVHLKLERGNLMGGWKYSTFSGFLVFP
type: DOMAIN
name: C1q_dom
description: C1q domain

phrase: SGSAKVAFSATRSTNHEPSEMSNRTMTIYFDQVLVNIGNHFDLASSIFVAPRKGIYSFSFHVVKVYNRQTIQVSLMQNGYPVISAFAGDQDVTREAASNGVLLLMEREDKVHLKLERGNLMGGWKYSTFSGFLVFP
type: DOMAIN
name: C1q_dom
description: C1q domain

phrase: MSNRTMTIYFDQVLVNIGNHFDLASS
type: DOMAIN
name: C1q_dom
description: C1q domain

phrase: FVAPRKGIYSFSFHVVKVY
type: DOMAIN
name: C1q_dom
description: C1q domain

phrase: EAASNGVLLLMEREDKVHLKL
type: DOMAIN
name: C1q_dom
description: C1q domain

phrase: KYSTFSGFLV
type: DOMAIN
name: C1q_dom
description: C1q domain
Protein sequence:
MSLQAFRIGLLSTTAAPLAYARPFSSYAALLAKKKGKTSGKPGKADNEEPIEIIDVKKYVIDATKQFEKTLELHKRKLAEQKVGTASPTIFNDLRVGKEGQKFTELAATSLKGRNALIVTVFDPKDTKNIVSAIMAAGLNLNPERIPNNDQQLKVSLPPITTETRQAVCKDLKKVFEDYKHSALKESLGHVRGEIMKELKHLQKKNDDVKKVIQDVEKIHKEYTIKLQEQLKQAEKSVMNQ

Annotated regions:
phrase: KRKLAEQKVGTASPTIFNDLRVGKEGQKFTELAATSLKGRNALIVTVFDPKDTKNIVSAIMAAGLNLNPERIPNNDQQLKVSLPPITTETRQAVCKDLKKVFEDYKHSALKESLGHVRGEIMKELKHLQKKNDDVKKVIQDVEKIHKEYTIKLQEQLKQAEKSV
type: DOMAIN
name: Ribosome_recyc_fac_dom
description: Ribosome recycling factor domain
Protein sequence:
MAKVQFKPRATTEAIFVHCSATKPSQNVGVREIRQWHKEQGWLDVGYHFIIKRDGTVEAGRDELAVGSHAKGYNHNSIGVCLVGGIDDKGKFDANFTPAQMQSLRSLLVTLLAKYEGSVLRAHHDVAPKACPSFDLKRWWEKNELVTSDRG

Annotated regions:
phrase: TEAIFVHCSATKPSQNVGVREIRQWHKEQGWLDVGYHFIIKRDGTVEAGRDELAVGSHAKGYNHNSIGVCLVGGIDDKGKFDANFTPAQMQSLRSLLVTLLAKYEGSVLRAHHDVAPKAC
type: DOMAIN
name: Amidase_domain
description: N-acetylmuramoyl-L-alanine amidase domain

phrase: EAIFVHCSATKPSQNVGVREIRQWHKEQGWLDVGYHFIIKRDGTVEAGRDELAVGSHAKGYNHNSIGVCLVGGIDDKGKFDANFTPAQMQSLRSLLVTLLAKYEGSVLRAHHDVAPKAC
type: DOMAIN
name: Amidase_domain
description: N-acetylmuramoyl-L-alanine amidase domain

phrase: MAKVQFKPRATTEAIFVHCSATKPSQNVGVREIRQWHKEQGWLDVGYHFIIKRDGTVEAGRDELAVGSHAKGYNHNSIGVCLVGGIDDKGKFDANFTPAQMQSLRSLLVTLLAKYEGSVLRAHHDVAPKACPSFDLKRWWEKNELVTSDR
type: DOMAIN
name: Amidase_domain
description: N-acetylmuramoyl-L-alanine amidase domain

phrase: MAKVQFKPRATTEAIFVHCSATKPSQNVGVREIRQWHKEQGWLDVGYHFIIKRDGTVEAGRDELAVGSHAKGYNHNSIGVCLVGGIDDKGKFDANFTPAQMQSLRSLLVTLLAKYEGSVLRAH
type: DOMAIN
name: PGRP_domain_met/bac
description: Peptidoglycan recognition protein family domain, metazoa/bacteria