nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MKFKKKNYTSQVDEMDCGCAALSMILKSYGTEKSLASLRLLAGTTIEGTSALGIKKAGEGLGFVVQVLRADASLFEMKKVPYPFIAHVIKNQKYPHYYVITGANKNSVFIADPDPTVKMTKLSKEVFLSEWTGISLFLSPTPSYQPTKEKTSSLLSFIPIITRQKKVILNIVIASFIVTLINILGSYYLQSMIDSYIPNALMGTLGIISVGLLLTYIIQQVLEFAKAFLLNVLSQRLAIDVILSYIRHIFQLPMSFFSTRRTGEITSRFSDASSILDAIASTILSLFLDLTIVLMTGLILGLQNMQLFLLVLLAIPLYIVVIIIFTPLFERQNHEVMQTNAILNSSIIEDINGIETIKALASEQERYQKIDYEFASYLKEAFTLQQSEAIQTAIKTTVQLVLNVLILWFGATLVMHQKITLGQLITFNALLSYFTNPITNIINLQTKLQKARVANERLNEVYLVPSEFEEKKTELSLSHFNLNMSEISYQYGFGRKVLSEIKLSIKENEKLTIVGISGSGKSTLVKLLVNFFQPTSGTITLGGIDLQQFDKHQLRRLINYLPQQPYIFTGSIMDNLLLGASEATSQEEIIRAVELAEIRADIEQMQLGYQTELSSDASSLSGGQKQRIALARALLSPAKILILDEATSNLDMITEKKILKNLLALDKTIIFIAHRLSVAEMSHRIIVIEQGKVIESGSHSELLAQNGFYAQLYHN

Annotated regions:
phrase: LSGGQKQRIALARA
type: CONSERVED_SITE
name: ABC_transporter-like_CS
description: ABC transporter-like, conserved site

phrase: IVIASFIVTLINILGSYYLQSMIDSYIPNALMGTLGIISVGLLLTYIIQQVLEFAKAFLLNVLSQRLAIDVILSYIRHIFQLPMSFFSTRRTGEITSRFSDASSILDAIASTILSLFLDLTIVLMTGLILGLQNMQLFLLVLLAIPLYIVVIIIFTPLFERQNHEVMQTNAILNSSIIEDINGIETIKALASEQERYQKIDYEFASYLKEAFTLQQSEAIQTAIKTTVQLVLNVLILWFGATLVMHQKITLGQLITFNALLSYFTNPITNIINLQTKLQ
type: DOMAIN
name: ABC1_TM_dom
description: ABC transporter type 1, transmembrane domain

phrase: LNIVIASFIVTLINILGSYYLQSMIDSYIPNALMGTLGIISVGLLLTYIIQQVLEFAKAFLLNVLSQRLAIDVILSYIRHIFQLPMSFFSTRRTGEITSRFSDASSILDAIASTILSLFLDLTIVLMTGLILGLQNMQLFLLVLLAIPLYIVVIIIFTPLFERQNHEVMQTNAILNSSIIEDINGIETIKALASEQERYQKIDYEFASYLKEAFTLQQSEAIQTAIKTTVQLVLNVLILWFGATLVMHQKITLGQLITFNALLSYFTN
type: DOMAIN
name: ABC1_TM_dom
description: ABC transporter type 1, transmembrane domain

phrase: LSEIKLSIKENEKLTIVGISGSGKSTLVKLLVNFFQPTSGTITLGGIDLQQFDKHQLRRLINYLPQQPYIFTGSIMDNLLLGASEATSQEEIIRAVELAEIRADIEQMQLGYQTELSSDASSLSGGQKQRIALARALLSPAKILILDEAT
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: LNMSEISYQYGFGRKVLSEIKLSIKENEKLTIVGISGSGKSTLVKLLVNFFQPTSGTITLGGIDLQQFDKHQLRRLINYLPQQPYIFTGSIMDNLLLGASEATSQEEIIRAVELAEIRADIEQMQLGYQTELSSDASSLSGGQKQRIALARALLSPAKILILDEATSNLDMITEKKILKNLLALDKTIIFIAHRLSVAEMSHRIIVIEQGKVIESGSHSELLAQNGFYAQLYH
type: DOMAIN
name: ABC_transporter-like_ATP-bd
description: ABC transporter-like, ATP-binding domain

phrase: ENEKLTIVGISGSGKSTLVKLLVNFFQPTSGTITLGGIDLQQFDKHQLRRLINYLPQQPYIFTGSIMDNLLLGASEATSQEEIIRAVELAEIRADIEQMQLGYQTELSSDASSLSGGQKQRIALARALLSPAKILILDEATSNLDMITEKKILKNLLALDKTIIFIAHRLSVAEMSHRIIVIEQG
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: QVDEMDCGCAALSMILKSYGTEKSLASLRLLAGTTIEGTSALGIKKAGEGLGFVVQVLRADASLFEMKKVPYPFIAHVIKNQKYPHYYVITGANKNSVFIADPDPTVKMTKLSKEVFLSEWTGISLF
type: DOMAIN
name: Peptidase_C39
description: Peptidase C39, bacteriocin processing

phrase: KNYTSQVDEMDCGCAALSMILKSYGTEKSLASLRLLAGTTIEGTSALGIKKAGEGLGFVVQVLRADASLFEMKKVPYPFIAHVIKNQKYPHYYVITGANKNSVFIADPDPTVKMTKLSKEVFLSEWTGISLFLSPT
type: DOMAIN
name: Peptidase_C39
description: Peptidase C39, bacteriocin processing
Protein sequence:
MKSYKIAVVGASGMVGRTFLRVLEEYNLNAEYTLFSSERSAGKEVEFFGKKYKFNLLDEHSFDEGFDIALFSAGGSTSEKFAPIAAEHGCVVIDNSSAWRMDPTVPLVVPEVNPEDILWNKGIIANPNCSTIQAVVALKPLHDKYKIKRIVYSTYQAVSGAGRAGYEDLENGIKGEEPKKFPYPIFSNCLPHIDVFLDDGYTKEEVKMVKETRKILHDDNLKVTATTVRVPVFDCHSESINVEFYNPFELSDVRKALEEFEGIIVEDDVKNNIYPLASKAKGTNEVYVGRIRRDDSVDNGLNIWVVADNIRKGAATNAVQIAVKLIEYWESK

Annotated regions:
phrase: KIAVVGASGMVGRTFLRVLEEYNLNAEYTLFSSERSAGKEVEFFGKKYKFNLLDEHSFDEGFDIALFSAGGSTSEKFAPIAAEHGCVVIDNSSAWRMDPTVPLVVPEVNPED
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: KIAVVGASGMVGRTFLRVLEEYNLNAEYTLFSSERSAGKEVEFFGKKYKFNLLDEHSFDEGFDIALFSAGGSTSEKFAPIAAEHGCVVIDNSSAWRMDPTVPLVVPEVNPEDILW
type: DOMAIN
name: Semialdehyde_DH_NAD-bd
description: Semialdehyde dehydrogenase, NAD-binding

phrase: LKPLHDKYKIKRIVYSTYQAVSGAGRAGYEDLENGIKGEEPKKFPYPIFSNCLPHIDVFLDDGYTKEEVKMVKETRKILHDDNLKVTATTVRVPVFDCHSESINVEFYNPFELSDVRKALEEFEGIIVEDDVKNNIYPLASKAKGTNEVYVGRIRRDDSVDNGLNIWVVADNIR
type: DOMAIN
name: Semialdhyde_DH_dimer_dom
description: Semialdehyde dehydrogenase, dimerisation domain
Protein sequence:
MLLDDRKLKILQAIIDDYIYSAEPVGSRTIAKKHELGLSSATIRNEMADLEEMGLLEQPYTSAGRIPSDRGYRLYVDQLMKIDELNECEIEKIRSDMNIRINELSQLIRSASAVMAKITKYTSMAVSPHMKKSVLKSVQVVPIESGKALVIIVTDANIVRNNLIRIPESVTPAFLIQISNMLNEQLKGFTLEMLKSDILNEKFEKLTALPFRLIKPILDGIEELIITIDNPEVYLEGATNILNFPEFKEVDKAKEFLNILDEKKLVSDLLTNSVNDNNEIIIHIGNENAMEGIKDCSLVTASYSVGNHVIGTIGIIGPTRMEYSRVVSSMNYIRNKINQEILKLLDNG

Annotated regions:
phrase: KLKILQAIIDDYIYSAEPVGSRTIAKKHELGLSSATIRNEMADLEEMGLLEQPYTSAGRIPS
type: DOMAIN
name: WHTH_HrcA_DNA-bd
description: Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain

phrase: QLIRSASAVMAKITKYTSMAVSPHMKKSVLKSVQVVPIESGKALVIIVTDANIVRNNLIRIPESVTPAFLIQISNMLNEQLKGFTLEMLKSDILNEKFEKLTALPFRLIKPILDGIEELIITIDNPEVYLEGATNILNFPEFKEVDKAKEFLNILDEKKLVSDLLTNSVNDNNEIIIHIGNENAMEGIKDCSLVTASYSVGNHVIGTIGIIGPTRMEYSRV
type: DOMAIN
name: HrcA_C
description: Heat-inducible transcription repressor HrcA, C-terminal
Protein sequence:
MSRLRIFADTNPATPEFDSRDGDAIAAQLQKIGVTFERWHASAPVEPGATPEQVMDAYRADIDRISAERGFKTVDVVSIAPDNPKREEMRAKFLDEHFHKEDEVRFFVAGSGLFTLHVDAKVYEIECVKDDLIAVPDGTLHWFDMGPEPHFVAIRFFTEPDGWVGHFTGTEIAKQFPRYAPEKPHKAS

Annotated regions:
Protein sequence:
MGETVRFGISIDDKLLESFDRLIEQKGYMNRSEAVRDLIRAALVELKWEGGEEETVGTVTLVYNHHVRDLSDKLTEQQHSHHNEIVSALHVHLDAHNCLEVLVVRGKAREVKKIADELIGVKGVKHGKLVMTTTGEELH

Annotated regions:
phrase: VGTVTLVYNHHVRDLSDKLTEQQHSHHNEIVSALHVHLDAHNCLEVLVVRGKAREVKKIADELIGVKGVKHGKLVM
type: DOMAIN
name: TF_NikR_Ni-bd_C
description: Transcription factor, NikR, nickel binding C-terminal

phrase: RFGISIDDKLLESFDRLIEQKGYMNRSEAVRDLIRAA
type: DOMAIN
name: CopG
description: Ribbon-helix-helix protein, CopG
Protein sequence:
MARSFGANSTVVLAIIFFGCLFALSSAIEEATKLGSVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVGFTDSERLIGEAAKNQAAVNPERTVFDVKRLIGRKFEDKEVQKDRKLVPYQIVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSVLTIDNGVFEVLSTNGDTHLGGEDFDHRVMEYFIKLIKKKHQKDISKDNKALGKLRRECERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLQKSQIDEIVLVGGSTRIPKVQQLLKDFFEGKEPNKGVNPDEAVAYGAAVQGGILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRLLGKFDLNGIPPAPRGTPQIEVTFEVDANGILNVKAEDKASGKSEKITITNEKGRLSQEEIDRMVKEAEEFAEEDKKVKEKIDARNALETYVYNMKNQVNDKDKLADKLEGDEKEKIEAATKEALEWLDENQNSEKEEYDEKLKEVEAVCNPIITAVYQRSGGAPGGAGGESSTEEEDESHDEL

Annotated regions:
phrase: VFDLGGGTFDVSV
type: CONSERVED_SITE
name: Heat_shock_70_CS
description: Heat shock protein 70, conserved site

phrase: GSVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVGFTDSERLIGEAAKNQAAVNPERTVFDVKRLIGRKFEDKEVQKDRKLVPYQIVNKDGKPYIQVKIKDGETKVFSPEEISAMILTKMKETAEAYLGKKIKDAVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSVLTIDNGVFEVLSTNGDTHLGGEDFDHRVMEYFIKLIKKKHQKDISKDNKALGKLRRECERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNNDLFRKTMGPVKKAMDDAGLQKSQIDEIVLVGGSTRIPKVQQLLKDFFEGKEPNKGVNPDEAVAYGAAVQGGI
type: DOMAIN
name: BIP_NBD
description: Endoplasmic reticulum chaperone BIP, nucleotide-binding domain

phrase: IVLVGGSTRIPKVQ
type: CONSERVED_SITE
name: Heat_shock_70_CS
description: Heat shock protein 70, conserved site

phrase: IDLGTTY
type: CONSERVED_SITE
name: Heat_shock_70_CS
description: Heat shock protein 70, conserved site
Protein sequence:
MPVAGGRIPDRDIAAIREKVRIEDVVGDYVQLRRAGADSLKGLCPFHDEKTPSFHVRPNHGHFHCFGCGEGGDVYAFIQKIEHVSFVEAVELLADKVGYTVTYTGSSTTNVQRDRGSRSRLLAANAAAAEFYAEALQSEEAAPARQYLTERNFDAAAAAKFGCGYAPSGWDKLTKHLLRKGFEFKELEAAGLSREGKRGPMDRFHRRLLWPIRVSSGETIGFGARRLFDDDPNQAKYVNTPETVLYKKSQVLFGLDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGEQHLSMLRRLMMDDNFFRGELIYVFDGDDAGRAAAVKAFEGEQNLSGQSFVAVAADGMDPCDLRLRSGDGALRDLVARRTPLFEFVIRSALAEHDLDSAEGRVAALRRCVPMLARIKDPTLRDEYARQLAGWVGWDNVAQVIGRVREEAKGGGRKDNNRRGQETAARPKPPPVQRPDPTDPTLWPQREALKAGLQYPALAGPVFDTLTVESFTHPGYGAVRTAMEAAGGTSAGITGAQWIETVREQTTSPAAANLVNELSVETINVEDDEKLPRYISSVLARLQEVWVGRQIAEVKSKLQRMSPVEQGDEYHALFGDLVAMESYRRSLLEQASGDDLTA

Annotated regions:
phrase: QAVVVEGYTDVMAMHLAGVTTAVASCGTAFGEQHLSMLRRLMMDDNFFRGELIYVFDGDDAGRAAAVKAF
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: HQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGEQHLSMLRRLMMDDNFFRGELIYVFDGDDAGRAAAVKAFEGEQNLSGQSFVAVA
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: FYAEALQSEEAAPARQYLTERNFDAAAAAKFGCGYAPSGWDKLTKHLLRKGFEFKELEAAGLSREGKRGPMDRFHRRLLWPIRVSSGETIGFGARRLFDDDPNQAKYVNTPETVLYKKSQVLFGLDLA
type: DOMAIN
name: DNAG_N
description: DNA primase DNAG, catalytic core, N-terminal

phrase: HQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGEQHLSMLRRLMMDDNFFRGELIYVFDGDDAGRAAAVKAF
type: DOMAIN
name: TOPRIM_DnaG_bac
description: Bacterial DnaG primase, TOPRIM domain

phrase: IPDRDIAAIREKVRIEDVVGDYVQLRRAGADSLKGLCPFHDEKTPSFHVRPNHGHFHCFGCGEGGDVYAFIQKIEHVSFVEAVELLADKVGYTVTYTGSSTTNVQRDRGSRSRLLAANAAAAEFYAEALQSEEAAPARQYLTERNFDAAAAAKFGCGYAPSGWDKLTKHLLRKGFEFKELEAAGLSREGKRGPMDRFHRRLLWPIRVSSGETIGFGARRLFDDDPNQAKYVNTPETVLYKKSQVLFGLDLAKRDIAKGHQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGEQHLSMLRRLMMDDNFFRGELIYVFDGDDAGRAAAVKAFEGEQNLSGQSFVAVAADGMDPCDLRLRSGDGALRDLVARRTPLFEFVIRSALAEHDLDSAEGRVAALRRCVPMLARIKDPTLRDEYARQL
type: DOMAIN
name: DNA_primase_DnaG
description: DNA primase, DnaG

phrase: PQREALKAGLQYPALAGPVFDTLTVESFTHPGYGAVRTAMEAAGGTSAGITGAQWIETVREQTTSPAAANLVNELSVETINVEDDEKLPRYISSVLARLQEVWVGRQIAEVKSKLQRMSPVEQGDEYHAL
type: DOMAIN
name: DNA_primase_DnaG_DnaB-bd_dom
description: DNA primase DnaG, DnaB-binding domain

phrase: LKGLCPFHDEKTPSFHVRPNHGHFHCFGCGEGGDVYAFIQKIEHVSFVEAVELL
type: DOMAIN
name: Znf_CHC2
description: Zinc finger, CHC2-type

phrase: HQAVVVEGYTDVMAMHLAGVTTAVASCGTAFGEQHLSMLRRLMMDDNFFRGELIYVFDGDDAGRAAAVKAFEGEQNLS
type: DOMAIN
name: TOPRIM_dom
description: TOPRIM domain

phrase: QREALKAGLQYPALAGPVFDTLTVESFTHPGYGAVRTAMEAAGGTSAGITGAQWIETVREQTTSPAAANLVNELSVETINVEDDEKLPRYISSVLARLQEVWVGRQIAEVKSKLQRMSPVEQGDEYHA
type: DOMAIN
name: DNA_primase_DnaG_DnaB-bd_dom
description: DNA primase DnaG, DnaB-binding domain

phrase: DRDIAAIREKVRIEDVVGDYVQLRRAGADSLKGLCPFHDEKTPSFHVRPNHGHFHCFGCGEGGDVYAFIQKIEHVSFVEAVELLADKVGYTVT
type: DOMAIN
name: Znf_CHC2
description: Zinc finger, CHC2-type

phrase: FEFVIRSALAEHDLDSAEGRVAALRRCVPMLARIKDPTLRDEYARQLAGWVGW
type: DOMAIN
name: DNA_primase_DnaB-bd
description: DNA primase, DnaB-helicase binding domain
Protein sequence:
MHQLGIEWNKLIAQIINFVIVLWVLNRFAFKPVLKILEERRKKIAESLQNAEKIKQELAEAEEARKEILRKANEQASFIVAEAQKVASYQGEKKIQEAVEEAKRVLKKAEESAKLEREKAKEEMRREILNLVIEITSKVVGKTLTLDDQERLKNEVLSKLPQKEGHEAYSRN

Annotated regions:
Protein sequence:
MPAKQTSGKGAKKAGKAKGRPAGASKTRRRKRKESYGIYIYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKKSTISSREVQTAVRLLLPGELAKHAVSEGTKAVTKYTTSK

Annotated regions:
phrase: REVQTAVRLLLPGELAKHAVSE
type: CONSERVED_SITE
name: HISTONE_H2B_site
description: Histone H2B, conserved site

phrase: AGASKTRRRKRKESYGIYIYKVLKQVHPDTGISSKAMSIMNSFVNDVFERIAGEASRLAHYNKKSTISSREVQTAVR
type: DOMAIN
name: Histone_H2A/H2B/H3
description: Histone H2A/H2B/H3
Protein sequence:
MSDTASSPFIDRPRSMLDEDSEFNSRQLISNLQFQISSLKTEKSLLQQNKESMAEKYEALLITKNEEVVSLQNDFDYVFKQRDELQSKYDNSQQINGKTVESLQVQLKDITERYDELKEEHEYLNSDFKKFCRDNNQVKSDLEFHINSKDQMNEKITSLQDENKSLCKTNDELIEKLNSISEQLVSNTQDKFSRNLQEQNSKLQRTNNQLQLKVDSLLQHRTSVELLRQKNITLTNKLSSLANLEEKCCKLEIENLELSNKFDTFFKTIEDSVNDDTSRTNESVVIEFMNKYKRLQNLNLVLQDKYNQSVTGVKNMQTELSNMQQKYSEAISKVESLNETVSTKTEFIDKLERQKLLNVKEIEYLRDSLKKLEELNLKRSKEETNDKSTEQYMTNLEKLVDEYRTEINTLQKQMSSQEIQSNVQSGSKRPRIIDNGIQNDFKSQVSVLEKENLKLLSTIKNLEYNNKTLGEKLQNLESLDNKKKELHILQLKSNPASQDQLIKQQTLDLLSKENQEMIETFVKNKSAHDMIPKSLFERQENDKLQLQTKIDQLNKRISRLRDIYSQKSRDILSVISKFFGYTIEFLPSPINSNDLSSRIKLVSKYMNNKDESNSAYLILDVNSKSLKANGSLEFKTLCEDLVTNWIREKDQIPCFLSALNLSIYDKYVS

Annotated regions:
Protein sequence:
MQRILAAHLPGIEVVGLDDVPAYDEPVEDAPDFDGNALIKARAGFEATGLPTLADDSGLCVDALNGMPGVLSARWSGPPKSDERNNALLLAQLADVPDERRAAFFHCSVAFVDGPGVTGETVVPGRMRGRVIREVRGDGGFGYDVLFEADELPGRTTAELSREEKDAISHRGRALRALGPVVAARLA

Annotated regions:
Protein sequence:
MRAEQYLKTCLECTIKKLGYTWPKKAVIEIPQNTLHGDLATNIALVLANNIGINPKNIAEKIAEKLQQESTSFSSVSVAGPGFLNITFSPTFWQKTINHILSKGSSYGSCQLGNKQKVLIEYVSANPTGPLHIGHGRGAAIGDTLARLLRFTGYNVTTEYYINDAGRQMQLLGLSIWLRIKELSGIQVTWPEEYYKGTYIIEIAKALLEEQPDIISYTDIDGEQASFHFGMNVILNGIKQDLKTFKVEHEEWFSERTLIKTNAIEQTLKALECTGLTFEKEGALWFQSTVFGDDKDRVLRKSDKSLTYFALDIAYHYTKYNRGFDRIIDILGADHHGYIARIKAAMQAFGHDPMTFDIILIQLVSLLENGIQVAMSTRAGQFEKLIDVINEVGVDAARFMFLLRKSDAHLDFDLELVKQRTMNNPVYYVQYAYARICSIIRKAHDLGFTITDVNEVPLSNITTKDELNLLRLLDKFEDVIYNAAQHLAPHYITHYLMELAGELHSYYAKYPVLQSNEKTIVLSRLALLQAVGQVIYNALNILGVTAPKNM

Annotated regions:
phrase: VQYAYARICSIIRKAHDLGFTITDVNEVPLSNITTKDELNLLRLLDKFEDVIYNAAQHLAPHYITHYLMELAGELHSYYAKYPVLQSNEKTIVLSRLALLQAVGQVIYNALNILGVTAPKN
type: DOMAIN
name: DALR_anticod-bd
description: DALR anticodon binding

phrase: YLKTCLECTIKKLGYTWPKKAVIEIPQNTLHGDLATNIALVLANNIGINPKNIAEKIAEKLQQESTSFSSVSVAGPGFLNIT
type: DOMAIN
name: Arg-tRNA-synth_N
description: Arginyl tRNA synthetase N-terminal domain

phrase: PTGPLHIGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site

phrase: INHILSKGSSYGSCQLGNKQKVLIEYVSANPTGPLHIGHGRGAAIGDTLARLLRFTGYNVTTEYYINDAGRQMQLLGLSIWLRIKELSGIQVTWPEEYYKGTYIIEIAKALLEEQPDIISYTDIDGEQASFHFGMNVILNGIKQDLKTFKVEHEEWFSERTLIKTNAIEQTLKALECTGLTFEKEGALWFQSTVFGDDKDRVLRKSDKSLTYFALDIAYHYTKYNRGFDRIIDILGADHHGYIARIKAAMQAFGHDPMTFDIILIQLVSLLENGIQVAMSTRAGQFEKLIDVINE
type: DOMAIN
name: ArgRS_core
description: Arginyl-tRNA synthetase, catalytic core domain

phrase: KVLIEYVSANPTGPLHIGHGRGAAIGDTLARLLRFTGYNVTTEYYINDAGRQMQLLGLSIWLRIKELSGIQVTWPEEYYKGTYIIEIAKALLEEQPDIISYTDIDGEQASFHFGMNVILNGIKQDLKTFKVEHEEWFSERTLIKTNAIEQTLKALECTGLTFEKEGALWFQSTVFGDDKDRVLRKSDKSLTYFALDIAYHYTKYNRGFDRIIDILGADHHGYIARIKAAMQAFGHDPMTFDIILIQLVSLLENGIQVAMSTRA
type: DOMAIN
name: ArgRS_core
description: Arginyl-tRNA synthetase, catalytic core domain

phrase: QYLKTCLECTIKKLGYTWPKKAVIEIPQNTLHGDLATNIALVLANNIGINPKNIAEKIAEKLQQESTSFSSVSVAGPGFLNIT
type: DOMAIN
name: Arg-tRNA-synth_N
description: Arginyl tRNA synthetase N-terminal domain

phrase: VQYAYARICSIIRKAHDLGFTITDVNEVPLSNITTKDELNLLRLLDKFEDVIYNAAQHLAPHYITHYLMELAGELHSYYAKYPVLQSNEKTIVLSRLALLQAVGQVIYNALNILGVTAPKN
type: DOMAIN
name: DALR_anticod-bd
description: DALR anticodon binding
Protein sequence:
MSADWSYLREKSASRLAPSMAKDHPNLPVVKEEGCYYYGVDGVKYLDFTSGIAVTNVGHRHPKIVQAIKEAADHLTHGPIGVIQYESILKLADELADILPGDLDCFFFANSGTEAIEGALKLAKFVTKRPYVVSFTGCFHGRTQGSLGVSTSKSKYRKFLQPNGLTYQVPYFKPSDPRILDEEGEVVESLACELLEEEFTNLFKYHVSSEEVAAVILEPVLGEGGYIIPPASWLAKVREICNRHDILLIFDEVQTGFGRTGEWFAAQTFGVTPDIMAIAKGIASGLPLSATVANHKLMQQWPLGSHGTTFGGNPIACSAALATLDVLKEENLLDNAREVGAYARERLNLLKEKYEMIGSIRSVGLMIGIEIIDPQTKKPDGAAVLRILDLALQEGVLFYLCGNEGEVIRMIPPLSVTKEQIDDGLDMLQRALVKYKEETHQPASL

Annotated regions:
phrase: LIFDEVQTGFGRTGEWFAAQTFGVTPDIMAIAKGIAS
type: CONSERVED_SITE
name: Aminotrans_3_PPA_site
description: Aminotransferases class-III pyridoxal-phosphate attachment site
Protein sequence:
MSGGTPYIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRPIPPRDEVFEYIIFRGSDIKDLTVCEPPKPQCSLPQDPAIVQSSLGSSTSSFQSVGSYGPFGRMPTYSQFSPSSLVGQQFGAVGVAGSSLTSFGTEASSSSALSQSSVVGSAFTQDSRALKTQLSQGRSSPQLDPLRKSPTMEQAVQTASAHLPAPAPVGRRSPVSTRPLPSTSQKPIENQEHRRAEVHKVSRPENEQLRNDSKRQIVPGAPSAPRRGRGGHRGGRGRFGIRRDGPMKFEKDFDFESANAQFNKEEIDREFHNKLKLKEDKLEKQEKPVNGEDKGDSGVDTQNSEGNADEEDPLGPNCYYDKTKSFFDNISCDDNRERRPTWAEERRLNAETFGIPLRPNRGRGGYRGRGGLGFRGGRGRGSGRGGAFTTPRGFRGGFRGGRGGREFADFEYRKDNKVAA

Annotated regions:
phrase: ERRPTWAEERRLNAETFGIP
type: DOMAIN
name: TFG_box
description: TFG box

phrase: MKFEKDFDFESANAQFNKEEIDREFHNKLKLKEDKLEKQEKPVNGEDKGDSGVDTQNSEGNADEEDPLGPNCYYDKTKSFFDNISCDDNRERRPTWAEERRLNAETF
type: DOMAIN
name: FDF_dom
description: FDF domain

phrase: MKFEKDFDFESANAQFNKEEIDREFHNKLKLKEDKLEKQEKPVNGEDKGDSGVDTQNSEGNADEEDPLGPNCYYDKTKSFFDNISCDDNRERRPTWAEERRLNAETFGIP
type: DOMAIN
name: FDF_dom
description: FDF domain

phrase: IRRDGPMKFEKDFDFESANAQFNKEEIDREFHNKLK
type: DOMAIN
name: DFDF
description: DFDF domain

phrase: MSGGTPYIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRPIPPRDEVFEYIIFRGSDIKDLTVCEP
type: DOMAIN
name: Sm
description: Sm domain

phrase: MSGGTPYIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRPIPPRDEVFEYIIFRGSDIKDLTVCEPPKPQCSLPQDPAIVQSS
type: DOMAIN
name: Lsm14-like_N
description: Lsm14-like, N-terminal

phrase: CYYDKTKSFFDNISCD
type: DOMAIN
name: FFD_box
description: FFD box

phrase: GTPYIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRPIPPRDEVFEYIIFRGSDIKDLT
type: DOMAIN
name: Lsm14-like_N
description: Lsm14-like, N-terminal

phrase: PYIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRPIPPRDEVFEYIIFRGSDIKDLTVCE
type: DOMAIN
name: Lsm14-like_N
description: Lsm14-like, N-terminal
Protein sequence:
MASLIYRQLLANSYAVDLSDEIQSVGSEKNQRVTVNPGPFAQTVYAPVNWGPGEVNDSTVVQPVLDGPYQPASFDLPVGNWMLLAPTGPGVVVEGTDNSGRWLSVILIEPGVTSETRTYTMFGSSKQVLVSNASDTKWKFVEMMKTAIDGDYAEWGTLLSDTKLYGMMKYGKRLFIYEGETPNATTKRYIVTNYASVEVRPYSDFYIISRSQESACTEYINNGLPPIQNTRNVVPVAIVSRSIKPREVQANEDIVVSKTSLWKEMQYNRDIIIRFKFDNSIIKSGGLGYKWAEISFKAANYQYNYMRDGEDVTAHTTCSVNGVNDFSFNGGSLPTDFAISRYEVIKENSYVYVDYWDDSQAFRNMVYVRSLAANLNDVMCSGGHYSFALPAGQWPVMKGGAVTLHTAGVTLSTQFTDYVSLNSLRFRFRLAAEEPSFTITRTRVSKLYGIPAANPNGGREYYEVAGRFSLISLVPSNDDYQTPIMNSVTVRQYLERHLNELREEFNNLSQEIAVSQLIDLAMLPLDMFSMFSGIESTVNAAKSMATNVMRKFKSSKLASSVSMLRDSLSDGASSIARSTSIRSIGSTASAWANISERTQDAVNEVATISSQVSQISGKLRLKEITTQTEGMNFDDVSGAVLKAKIDRSIQVDQNALPDVITEASEKFIRNRAYRVIDGDEAFEAGTDGRFFAYKVETLEEMPFNIEKFADLVTNSPVISAIIDFKTLKNLNDNYGITREQAFNLLRSNPKVLRGFIDQNNPIIKNRIEQLIMQCRL

Annotated regions:
phrase: LDGPYQPASFDLPVGNWMLLAPTGPGVVVEGTDNSGRWLSVILIEPGVTSETRTYTMFGSSKQVLVSNASDTKWKFVEMMKTAIDGDYAEWGTLLSDTKLYGMMKYGKRLFIYEGETPNATTKRYIVTNYASVEVRPYSDFYIISRSQESACTEYINNG
type: DOMAIN
name: VP4_concanavalin-like
description: Haemagglutinin outer capsid protein VP4, concanavalin-like domain

phrase: NSVTVRQYLERHLNELREEFNNLSQEIAVSQLIDLAMLPLDMFSMFSGIESTVNAAKSMATNVMRKFKSSKLASSVSMLRDSLSDGASSIARSTSIRSIGSTASAWANISERTQDAVNEVATISSQVSQISGKLRLKEITTQTEGMNFDDVSGAVLKAKIDRSIQVDQNALPDVITEASEKFIRNRAYRVIDGDEAFEAGTDGRFFAYKVETLEEMPFNIEKFADLVTNSPVISAIIDFKTLKNLNDNYGITREQAFNLLRSNPKVLRGFIDQNNPIIKNRIEQLIMQCR
type: DOMAIN
name: VP4_helical
description: Rotavirus VP4 helical domain

phrase: ANEDIVVSKTSLWKEMQYNRDIIIRFKFDNSIIKSGGLGYKWAEISFKAANYQYNYMRDGEDVTAHTTCSVNGVNDFSFNGGSLPTDFAISRYEVIKENSYVYVDYWDDSQAFRNMVYVRSLAANLNDVMCSGGHYSFALPAGQWPVMKGGAVTLHTAGVTLSTQFTDYVSLNSLRFRFRLAAEEPSFTITRTRVSKLYGIPAANPNGGREYYEVAGRFSLISL
type: DOMAIN
name: Rota_VP4_MID
description: Rotavirus VP4, membrane interaction domain
Protein sequence:
MAFKYHKVAIVGKHYKKEVSQMVETLYAYLQQQGLEIIIENDTAADTSLVNVAIASLKEIALRCDVAIVVGGDGNFLKASRLLALYSNIPVIGINKGKLGFLTTLAADDNALKNDLYAILKGDSSVTKMSMLKYRVDNNLRAPLEASIALNEIAITASRGLMFGLKVFIDGRYAFDQRGDGLIVSTPTGSTAHAMSAGGPILNPNQNSVVLVPICSHSLNSRPLVISDESVIDIYITDYNDPESVLSIDGRHDTILKAHQKVTIQKARKKVTVLHTKDYNYYDTLREKLGWSKVLF

Annotated regions:
Protein sequence:
MSLLLKDTENYGNVYIEDGIIAEIGCAACDVDTVIDASKKALVPGFVNTHTHAAMTLFRGYADDLPLQTWLAEWIWPLEAKLTDEDVYWGTKLACLEMIRTGTTCFNDMYWHALASARAVDEMGIRAVISNVFIDIDGASDEETQRENKRLTGRLIKDYSDRVIPALGPHAVYTVSENSLSWAAEFAREEDILIHIHVSETSAEVEDCIKRTGMRPVEYLDHIGFLGPNVVAAHCVWLNDHEISLLKEHGVRVSHSPVSNMKLAVGQTMRYPALSRAGVHVSLGTDGCASNNNLNMLESAKFASLLQKAAANQQTVMPASEALAMITKNGAEALRIGSGVIREGAPADVLLIDLQLPAMIPLHNLDSNLIYASCNCVDTTICDGVPLMQNRVVQGEEEILKKASEAAYDLVNRK

Annotated regions:
phrase: LVPGFVNTHTHAAMTLFRGYADDLPLQTWLAEWIWPLEAKLTDEDVYWGTKLACLEMIRTGTTCFNDMYWHALASARAVDEMGIRAVISNVFIDIDGASDEETQRENKRLTGRLIKDYSDRVIPALGPHAVYTVSENSLSWAAEFAREEDILIHIHVSETSAEVEDCIKRTGMRPVEYLDHIGFLGPNVVAAHCVWLNDHEISLLKEHGVRVSHSPVSNMKLAVGQTMRYPALSRAGVHVSLGTDGCASNNNLNMLESAKFASLLQKAAANQQTVMPASEALAMITKNGAEALRIGSGVIREGAPADVLLIDLQLPAMIPLHNLDSNLIYASCNCVDTTICDG
type: DOMAIN
name: Amidohydro-rel
description: Amidohydrolase-related
Protein sequence:
MNSRVFNFGAGPAMLPEEILKEAQEEFLNWRNTGMSILEIGHRTPEIINLLSTAEQSLRELLNIPKNYHVLFLGGAARAQFAMIPMNLLQPGDEAAYFITGIWSKMAYHEANLLKQAYYLSNEEKEGFVSIPDYQKWELKSNTAYVYYTPNETINGVRFPYVPKTGGVPLVADMTSCLLSEPININQYGLIFAGAQKNIANAGLTVVIIHEDLLKNQPEPVIPTMLNYKNHAEHRSLYATPPVFNCYLASKMFEWIKTQGGIEGLFQRNCLKAAKLYQYLDSTDFYLTPVSKEARSIMNICFSLCYPDLEQKFLYMANERGLKALKGHRFAGGLRASLYNAMPMAGVDALIEFLSEFAKENG

Annotated regions:
phrase: YGLIFAGAQKNIANAGLTV
type: BINDING_SITE
name: Aminotrans_V_PyrdxlP_BS
description: Aminotransferase class-V, pyridoxal-phosphate binding site

phrase: VFNFGAGPAMLPEEILKEAQEEFLNWRNTGMSILEIGHRTPEIINLLSTAEQSLRELLNIPKNYHVLFLGGAARAQFAMIPMNLLQPGDEAAYFITGIWSKMAYHEANLLKQAYYLSNEEKEGFVSIPDYQKWELKSNTAYVYYTPNETINGVRFPYVPKTGGVPLVADMTSCLLSEPININQYGLIFAGAQKNIANAGLTVVIIHEDLLKNQPEPVIPTMLNYKNHAEHRSLYATPPVFNCYLASKMFEWIKTQGGIEGLFQRNCLKAAKLYQYLDSTDFYLTPVSKEARSIMNICFSLCYPDLEQKFLYMANERGLKALKGHRFAGGLRASLYNAMPMAGVDA
type: DOMAIN
name: Aminotrans_V_dom
description: Aminotransferase class V domain
Protein sequence:
MAKISKRRQAFAAKVDRQKLYAIEDALSLVKECASAKFDESIDVAVQLGIDAKKSDQVVRGSVVLPAGTGKSVRVAVFAQGEKAEQARAAGAEIVGMEDLAEQIKAGQMDFDIVIASPDTMRIVGTLGQILGPRGLMPNPKVGTVTPDVATAVKNAKAGQVQFRVDKAGIIHATIGRASFEPTALRSNLSALIEALQKAKPATSKGVYLRKIALSSTMGVGVRVDHATLAAQ

Annotated regions:
phrase: MRIVGTLGQILGPRGLMP
type: CONSERVED_SITE
name: Ribosomal_uL1_CS
description: Large ribosomal subunit protein uL1, conserved site
Protein sequence:
MVEDTASVAALYRSYLTPLDIDINIVGTGRDAIESIGRREPDLILLDLRLPDMTGMDVLYAVKEKSPDVPIVFMTAHGSIDTAVEAMRHGAQDFLIKPCEADRLRVTVNNAIRKASKLKNDVDNKNQNYQGFIGSSQTMQAVYRTIDSAASSKASIFITGESGTGKEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATERQGAAEAADGGTLFLDELCEMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLHLPPLRARGDDVIEIAYSLLGFMSKEEGKDFVRLSAEVVERFRQYEWPGNVRQLQNVLRNVVVLNEGREITLDMLPPPLNQMSAPINRALPLAHENKVSVHEIFPLWMTEKQAIEQAIEACDGNIPRAATYLDVSPSTIYRKLQTWNEKVKEKEKER

Annotated regions:
phrase: IGSSQTMQAVYRTIDSAASSKASIFITGESGTGKEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATERQGAAEAADGGTLFLDELCEMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIP
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: GAAEAADGGTLFLDE
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_2
description: Sigma-54 interaction domain, ATP-binding site 2

phrase: FIGSSQTMQAVYRTIDSAASSKASIFITGESGTGKEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATERQGAAEAADGGTLFLDELCEMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLYVIPLHLPPLRARGDDVIEIAYSLLGFMSKEEGKDFVRLSAEVVERFRQYEWPGNVRQLQNVLRNVV
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: SKASIFITGESGTGKEVCAEAIHAASKRGDKPFIAINCAAIPKDLIESELFGHVKGAFTGAATERQGAAEAADGGTLFLDELCEMDLDLQTKLLRFIQTGTFQKVGSSKMKSVDVRFVCATNRDPWKEVQEGRFREDLYYRLY
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: VEDTASVAALYRSYLTPLDIDINIVGTGRDAIESIGRREPDLILLDLRLPDMTGMDVLYAVKEKSPDVPIVFMTAHGSIDTAVEAMRHGAQDFLIKPCEADRLRVT
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: MVEDTASVAALYRSYLTPLDIDINIVGTGRDAIESIGRREPDLILLDLRLPDMTGMDVLYAVKEKSPDVPIVFMTAHGSIDTAVEAMRHGAQDFLIKPCEADRLRVTVNNA
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: LWMTEKQAIEQAIEACDGNIPRAATYLDVSPSTIYRKL
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: WPGNVRQLQ
type: CONSERVED_SITE
name: Sigma_54_int_dom_CS
description: Sigma-54 interaction domain, conserved site

phrase: MVEDTASVAALYRSYLTPLDIDINIVGTGRDAIESIGRREPDLILLDLRLPDMTGMDVLYAVKEKSPDVPIVFMTAHGSIDTAVEAMRHGAQDFLIKPCEADRLRVT
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain
Protein sequence:
MRSGLIAQKVGMTRLFTDEGTHVPVTVLKVEACQVVAVRTSETDGYTAVQLGAGVAKVKRTSKAMRGHFAAAKVEPKKKVVEFRVSEDCLLEPGAELSAAHFVAGQKVDIAGTTIGKGFAGAMKRHNFRGLEATHGVSVSHRSHGSTGQCQDPGRVFKGKKMAGHMGDTRITQQSLTVVATDADRGLILVKGSVPGADGAWLEVRDAVKKKLPEGVPLPAGLKAAVEAAVDGEKE

Annotated regions:
phrase: FVAGQKVDIAGTTIGKGFAGAMK
type: CONSERVED_SITE
name: Ribosomal_uL3_CS
description: Large ribosomal subunit protein uL3, conserved site
Protein sequence:
MVSEITHKSYPLHFVLFPFMAQGHMIPMVDIARLLAQRGVKITIVTTPHNAARFENVLSRAIESGLPISIVQVKLPSQEAGLPEGNETFDSLVSMELLVPFFKAVNMLEEPVQKLFEEMSPQPSCIISDFCLPYTSKIAKKFNIPKILFHGMCCFCLLCMHVLRKNREILENLKSDKEHFVVPYFPDRVEFTRPQVPMATYVPGEWHEIKEDIVEADKTSYGVIVNTYQELEPAYANDYKEARSGKAWTIGPVSLCNKVGADKAERGNKADIDQDECLKWLDSKEEGSVLYVCLGSICSLPLSQLKELGLGLEESQRPFIWVVRGWEKNKELLEWFSESGFEERVKDRGLLIKGWSPQMLILAHHSVGGFLTHCGWNSTLEGITSGIPLLTWPLFGDQFCNQKLVVQVLKVGVSAGVEEVTNWGEEEKIGVLVDKEGVKKAVEELMGESDDAKERRKRVKELGQLAQKAVEEGGSSHSNITSLLEDIMQLAQSNN

Annotated regions:
phrase: WSPQMLILAHHSVGGFLTHCGWNSTLEGITSGIPLLTWPLFGD
type: CONSERVED_SITE
name: UDP_glycos_trans_CS
description: UDP-glycosyltransferase family, conserved site