nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MRALFLHSNRIKVIARQKALKEADQLEKPEFDVNKEHLAVFVAVEHGDNLSVAEQLVEEIKKVLEKIGIKEKVVVLYPYVHLTNNPSSPKLAKEVLDKAYDLLKSEGFEVYKAPFGWYKEFEIHVKGHPLAELSRTIKPKKVKKEEGNKVYLIYDGEKEYIIVGKKDKILVKDYKEIENKEKLHFELPKDGIELPIPINQDFEKMVLKEVFSEGEEIEKNPLNDVAKKFGFEWEPLSDYGHMRYKPYAALMVDLVNDYSIKIAKELPFPVFIVKGTNMFDLKQGPVAEHAKLFGERMYEVQSDKSVFVLRYAACFQQFAIAKDLTLSYKNVPFGMLEVADSYRFEQPGEVVLAFRLRKFYMPDLHVFTKDLDEAVEQFLNMHKKIMEEIKKIGRDYELLINVASFEDYEKYKYIIEQIYKDVKKPLLLAIYPKSDQRYWIINIEYHIIDVLGRPREIGTTQIDLHNSKRFGIKYIDKDGSEKHVIILHNAILGSIERYIYALFDTALRKEKPVLPFWISPVQVRVIPVSEKYLEYAEQIAKELESKFRVELDDRDETLNKKIKDAESLWVPYIIVIGEKEIKNNKITVRDRYENKVYETSLEDLISKMEELQKGYPFRPLYGPMKLSLKPANL

Annotated regions:
phrase: YEVQSDKSVFVLRYAACFQQFAIAKDLTLSYKNVPFGMLEVADSYRFEQPGEVVLAFRLRKFYMPDLHVFTKDLDEAVEQFLNMHKKIMEEIKKIGRDYELLINVASFEDYEKYKYIIEQIYKDVKKPLLLAIYPKSDQRYWIINIEYHIIDVLGRPREIGTTQIDLHNSKRFGIKYIDKDGSEKHVIILHNAILGSIERYIYALF
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: ELPFPVFIVKGTNMFDLKQGPVAEHAKLFGERMYEVQSDKSVFVLRYAACFQQFAIAKDLTLSYKNVPFGMLEVADSYRFEQPGEVVLAFRLRKFYMPDLHVFTKDLDEAVEQFLNMHKKIMEEIKKIGRDYELLINVASFEDYEKYKYIIEQIYKDVKKPLLLAIYPKSDQRYWIINIEYHIIDVLGRPREIGTTQIDLHNSKRFGIKYIDKDGSEKHVIILHNAILGSIERYIYALFDTALRKEK
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: PVQVRVIPVSEKYLEYAEQIAKELESKFRVELDDRDETLNKKIKDAESLWVPYIIVIGEKEIKNNKITVRDRYENKVYETSLEDLISKM
type: DOMAIN
name: ThrRS_anticodon
description: Threonine-tRNA ligase, class IIa, anticodon-binding domain

phrase: MRALFLHSNRIKVIARQKALKEADQLEKPEFDVNKEHLAVFVAVEHGDNLSVAEQLVEEIKKVLEKIGIKEKVVVLYPYVHLTNNPSSPKLAKEVLDKAYDLLKSEGFEVYKAPFGWYKEFEIHVKGHPLAELSRT
type: DOMAIN
name: Threonyl-tRNA_syn_edit_dom_arc
description: Threonyl-tRNA synthetase, editing domain, archaea

phrase: QVRVIPVSEKYLEYAEQIAKELESKFRVELDDRDETLNKKIKDAESLWVPYIIVIGEKEIKNNKITVRDRYENKVYETSLEDLISKME
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding
Protein sequence:
MTNQSLHVNIDKWIAENETSFLPPVCNKLMFFYQLNIMYVGGPNVRKDYHIEEGEELFYQVRGDMVLKVIENGKHKDVHIREGEMFLLPARIPHSPQRQANTVGLVIERRRLSKETDGLRYFVANSTEVLFERWFYCENLGTQLVPIIKEFMDSKENETGKPDPANPIKPAPYPLNTMNVMTPFSFREWVEKQKPVLASGCPVDMFGEQFETETLLFGSGTSANKRRTDGWIWQLEGLSNVFMNGKEYSLTAGDCLLIFGETEYKWQRSQDCVALYVAQDPDRKRPY

Annotated regions:
Protein sequence:
MTRYIFITGGVVSSLGKGLASAALGALLQARGYKVRLRKLDPYLNVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTGVSATKADNITTGQIYKTIIEKERRGDYLGATVQVIPHVTNEIKDFILSPAMDETGAKPVDFVLVEIGGTVGDIEGLPFFEAIRQLRQDLPRNQSCYVHLTLLPFIKTAGEMKTKPTQHSVKELRSIGIQPDILLCRCEQEIPVEEKRKIAQFCNVRPSAVIQAMDSSSIYAVPIDYHQEGLDAEVLDVFGMHDAPKPDLSRWEAIDQTVNHPDGEVTIAVVGKYTVLKDAYKSLIEALHHGGLANKVKVNLDWVESETFEGDEGAAAARLENAHAIMVPGGFGERGAEGKIRAAQFARERKVPYFGICFGMQMAVIETLRNVAGIKDASSSEFGPTERPVVGIMTEWIKGNETVQRRANDDLGGTMRLGAYDAVLTPGSKVAQIYGGTAISERHRHRYEVNIGYAHRMEESGLKLTGRSPDGVLPEIVEREDHPWFIGVQYHPELKSRPFAPHPLFASFIAAAKEQGRLV

Annotated regions:
phrase: VLKDAYKSLIEALHHGGLANKVKVNLDWVESETFEGDEGAAAARLENAHAIMVPGGFGERGAEGKIRAAQFARERKVPYFGICFGMQMAVIETLRNVAGIKDASSSEFGPTERPVVGIMTEWIKGNETVQRRANDDLGGTMRLGAYDAVLTPGSKVAQIYGGTAISERHRHRYEVNIGYAHRMEESGLKLTGRSPDGVLPEIVEREDHPWFIGVQYHPELKSRPFAPHPLFASFI
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase

phrase: RYIFITGGVVSSLGKGLASAALGALLQARGYKVRLRKLDPYLNVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTGVSATKADNITTGQIYKTIIEKERRGDYLGATVQVIPHVTNEIKDFILSPAMDETGAKPVDFVLVEIGGTVGDIEGLPFFEAIRQLRQDLPRNQSCYVHLTLLPFIKTAGEMKTKPTQHSVKELRSIGIQPDILLCRCEQEIPVEEKRKIAQFCNVRPSAVIQAMDSSSIYAVPIDYHQEGLDAEVL
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: RYIFITGGVVSSLGKGLASAALGALLQARGYKVRLRKLDPYLNVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTGVSATKADNITTGQIYKTIIEKERRGDYLGATVQVIPHVTNEIKDFILSPAMDETGAKPVDFVLVEIGGTVGDIEGLPFFEAIRQLRQDLPRNQSCYVHLTLLPFIKTAGEMKTKPTQHSVKELRSIGIQPDILLCRCEQEIPVEEKRKIAQFCNVRPSAVIQAMDSSSIYAVPIDYHQEGLDAEVLDVF
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: VTIAVVGKYTVLKDAYKSLIEALHHGGLANKVKVNLDWVESETFEGDEGAAAARLENAHAIMVPGGFGERGAEGKIRAAQFARERKVPYFGICFGMQMAVIETLRNVAGIKDASSSEFGPTERPVVGIMTEWIKGNETVQRRANDDLGGTMRLGAYDAVLTPGSKVAQIYGGTAISERHRHRYEVNIGYAHRMEESGLKLTGRSPDGVLPEIVEREDHPWFIGVQYHPELKSRPFAPHPLFASF
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain
Protein sequence:
MDESILYVPAGPEGSALAASLHSTRQNAAFRYADSKFLSAVCSGQKAGDRLFLAGSKPLITVYSWGKESPDQRIPVPEPLTCMALCKHPSNEKINHKVPTFQLPWLLAGGSASGKLYIWELSSGNLVCVKEAHYQAINVLKFSECGTYLVSGGADARCSVWKTLDLVTIDDPETQKTASALTFMDHTLAVTDIWLTTGIRSDIRLYSSSKDGTVRNYDITSGKLITTFVLPLSVECLAVDPAGRACYAGLSDGTIRTVLQYKVNPHTSVLEAVGGNGKVVTLATDPELRESFVHHQPHRVTSVKVSLDGTTIISSDESGRVMVADAVTTQVVKALSPATSPVIYLAVDTVVAGSQFGRFEKKHRLIPQLKRVLVDGDLTKHFVSMEFSEEIKPQPDFDLWLQQKAEEAREVEEEKPKQKEQDSETEKLAKLTKAYGDLRQKHEQLLREMSA

Annotated regions:
phrase: SFVHHQPHRVTSVKVSLDGTTIISSDESGRVM
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: VCVKEAHYQAINVLKFSECGTYLVSGGADARCSV
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: KEAHYQAINVLKFSECGTYLVSGGADARCSVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: SGNLVCVKEAHYQAINVLKFSECGTYLVSGGADARCSVW
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: DPELRESFVHHQPHRVTSVKVSLDGTTIISSDESGRVMVA
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: SGKLITTFVLPLSVECLAVDPAGRACYAGLSDGTIRTV
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: KTASALTFMDHTLAVTDIWLTTGIRSDIRLYSSSKDGTVRNY
type: REPEAT
name: WD40_rpt
description: WD40 repeat

phrase: KESPDQRIPVPEPLTCMALCKHPSNEKINHKVPTFQLPWLLAGGSASGKLYIW
type: REPEAT
name: WD40_rpt
description: WD40 repeat
Protein sequence:
MTAKKSKSGRMTTALDLTTCEKLEHLQPIPKSRSSSITSIESEDGMMSTVLKPPPRRDFDDLMAFEGFIRDETWDNDFDYCHAHLTYYPPFIMKEVHNNLDKIKPTMNKNSRKFKRNLQHHIKKHLMHDMETCSGFKMDFNKVGMVETPTKVKWRFEDMGDHGFSKEEEDMYGRHWKLELEVTCNNENPLVEVDYKATPIM

Annotated regions:
Protein sequence:
MARGERRRRAAAAEGARPLERARGAGRRDGRAGGARGSAGGAALAVVVLALAFGLSGRWVLAWLGVRRALTLHPAPSALPPDSSSPAVAPEFFWGTYRPHVYFGMKTRSPKPLLTGLMWAQQGATPGTPPKLRHTCEQGDGVGPYGWEFHDGLSFGRQHIYDGALRLTTEFVKRSGGHHGGDWSWRVTVEPQASGTPSFPLVSLFFYVVTDGQEVLLPEVGAKGQLKFISGHTSELGDFRLTLLPPTTPGDTVPKHGSYNVFWSSNPGLPLLTDMVKSHLNSWFHHRPPGASPERYLGLPGSLKWEERGPSGQGQFLVQQVTLKAPFSVEFVFESGSARTGRDQASEQLVGGQLTRALESHAAAFKERFERTFQLKEKGLSPEEQALGQVALSGLLGGIGYFYGQGLVLPDTGMEGSEQKMDPSLFPPVPLFSGVPSRSFFPRGFLWDEGFHQLVVQRWDPHLTREALGHWLGLLNADGWIGREQILGDEARARVPPEFLVQRAAHANPPTLLLPVIHMLEGRAPEDLAFLRRAFPRLHAWFSWLHQSQAGPVPLSYRWRGRDLALPTLLNPKTLPSGLDDYPRASHPSAAERHLDLRCWVTLGARVLSQLAEELGETEAAAELGPLAASLEAAGSLDELHWAPELGVFADFGNHTKAVQLKSRPPQGLVRVVGRPPARLQYVDALGYVSLFPLLLQLLEPSSPRLGPLLDVLADSRHLWSPFGLRSLSASSLFYKQRNTEHDPPYWRGAVWLNINYLALGALHHYGRVEGPHKVQAAKLYRELRANVVSNVRQQYQATGFLWEQYSDQDGRGMGCRPFQGWTSLVLLIMAEEY

Annotated regions:
phrase: FFWGTYRPHVYFGMKTRSPKPLLTGLMWAQQGATPGTPPKLRHTCEQGDGVGPYGWEFHDGLSFGRQHIYDGALRLTTEFVKRSGGHHGGDWSWRVTVEPQASGTPSFPLVSLFFYVVTDGQEVLLPEVGAKGQLKFISGHTSELGDFRLTL
type: DOMAIN
name: Glyco_hydro_63N
description: Glycosyl hydrolase family 63, N-terminal

phrase: GGQLTRALESHAAAFKERFERTFQLKEKGLSPEEQALGQVALSGLLGGIGYFYGQGLVLPDTGMEGSEQKMDPSLFPPVPLFSGVPSRSFFPRGFLWDEGFHQLVVQRWDPHLTREALGHWLGLLNADGWIGREQILGDEARARVPPEFLVQRAAHANPPTLLLPVIHMLEGRAPEDLAFLRRAFPRLHAWFSWLHQSQAGPVPLSYRWRGRDLALPTLLNPKTLPSGLDDYPRASHPSAAERHLDLRCWVTLGARVLSQLAEELGETEAAAELGPLAASLEAAGSLDELHWAPELGVFADFGNHTKAVQLKSRPPQGLVRVVGRPPARLQYVDALGYVSLFPLLLQLLEPSSPRLGPLLDVLADSRHLWSPFGLRSLSASSLFYKQRNTEHDPPYWRGAVWLNINYLALGALHHYGRVEGPHKVQAAKLYRELRANVVSNVRQQYQATGFLWEQYSDQDGRGMGCRPFQGWTSLVLLIMA
type: DOMAIN
name: Glyco_hydro_63_C
description: Glycosyl hydrolase family 63, C-terminal
Protein sequence:
MAETIADQFAATLAAAGVRRIYGVVGDSLNGITDAIRRQGVIEWIHVRHEETAAFAASAEAHLTGTIAVCAGSCGPGNLHLINGLFDAHRSKVPVLAIAAHIPSQEIGTGYFQETHPQDLFRECSTYCELISGPEQMPRTLEIAIRHAVGDRGVSVVVIPGDVALQKAPTPINPKPQALLPRQPTITPAQEDLAALAALLNGGRKVTLLCGSGCAGAHEEMLALAERLKAPIVHALKGKEHVEYDNPFDVGMTGLIGFASGYYAMSDCDTLLMLGTDFPYRQFYPQGKSVKIAQIDIRPGHLGRRAPVDLALVGDVKSTAAALLPLLDGSQDDRHLGRALNHYQKTRKDLDDEARAKPDGKIIHPQQVAKALSDLADEDAIFTCDVGLPTVWAARYLAMNGRRRLVGSFWHGSMANAMAQAIGAQVSFPDRQVISLSGDGGFAMLMGDFLSLAQLGLPAKIVVFNNSTLGFVEVEQKSTGVLPTGTSLQNPNFAAMAEAIGIKGIRLERPGDVEAGLREALAHDGPVLVDAVVARTELPIPPSINVDMAKGFTLYMVKAVFNGRGNEILDLARENLWK

Annotated regions:
phrase: IHPQQVAKALSDLADEDAIFTCDVGLPTVWAARYLAMNGRRRLVGSFWHGSMANAMAQAIGAQVSFPDRQVISLSGDGGFAMLMGDFLSLAQLGLPAKIVVFNNSTLGFVEVEQKSTGVLPTGTSLQNPNFAAMAEAIGIKGIRLERPGDVEAGLREALAHDGPVLVDAVVARTEL
type: DOMAIN
name: TPP_POXB-like
description: Pyruvate oxidase POXB-like, PP-binding domain

phrase: TIADQFAATLAAAGVRRIYGVVGDSLNGITDAIRRQGVIEWIHVRHEETAAFAASAEAHLTGTIAVCAGSCGPGNLHLINGLFDAHRSKVPVLAIAAHIPSQEIGTGYFQETHPQDLFRECSTYCELISGPEQMPRTLEIAIRHAVGDRGVSVVVIPGDVALQ
type: DOMAIN
name: TPP_PYR_POXB-like
description: Pyruvate oxidase POXB-like, pyrimidine-binding domain

phrase: DVGLPTVWAARYLAMNGRRRLVGSFWHGSMANAMAQAIGAQVSFPDRQVISLSGDGGFAMLMGDFLSLAQLGLPAKIVVFNNSTLGFVEVEQKSTGVLPTGTSLQNPNFAAMAEAIGIKGIRLERPGDVEAGLREALAHDGPVLV
type: DOMAIN
name: TPP_enzyme_TPP-bd
description: Thiamine pyrophosphate enzyme, TPP-binding

phrase: IGAQVSFPDRQVISLSGDG
type: CONSERVED_SITE
name: TPP-bd_CS
description: TPP-binding enzyme, conserved site

phrase: AALAALLNGGRKVTLLCGSGCAGAHEEMLALAERLKAPIVHALKGKEHVEYDNPFDVGMTGLIGFASGYYAMSDCDTLLMLGTDFPYRQFYPQGKSVKIAQIDIRPGHLGRRAPVDLALVGDVKSTAAA
type: DOMAIN
name: Thiamin_PyroP_enz_cen_dom
description: Thiamine pyrophosphate enzyme, central domain

phrase: TIADQFAATLAAAGVRRIYGVVGDSLNGITDAIRRQGVIEWIHVRHEETAAFAASAEAHLTGTIAVCAGSCGPGNLHLINGLFDAHRSKVPVLAIAAHIPSQEIGTGYFQE
type: DOMAIN
name: Thiamin_PyroP_enz_TPP-bd_dom
description: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain
Protein sequence:
MKSVILTGLLFVLLCVDHMTASQSVVATQLIPMNSALTPVMMEGKVTNPIGIPFAEMSQMVGKQVNRPVAKGQTIMPNMVKTYAAGK

Annotated regions:
phrase: SVVATQLIPMNSALTPVMMEGKVTNPIGIPFAEMSQMVGKQVNRPVAKGQTIMPNMVKT
type: DOMAIN
name: AFP_Neu5c_C
description: Antifreeze-like/N-acetylneuraminic acid synthase C-terminal

phrase: SVVATQLIPMNSALTPVMMEGKVTNPIGIPFAEMSQMVGKQVNRPVAKGQTIMPNMV
type: DOMAIN
name: SAF
description: SAF domain

phrase: SQSVVATQLIPMNSALTPVMMEGKVTNPIGIPFAEMSQMVGKQVNRPVAKGQTIMPNMV
type: DOMAIN
name: SAF
description: SAF domain
Protein sequence:
MTTQNFLAEIGTEELPPKALKKLATAFAENVENELNQAGLSFEKVEWFAAPRRLAVKALGLATAQPSKKIEKRGPAVSAAFDADGKPTKAAEGWARGCGISVEQAERLATDKGEWLVHRAVIEGQPTKNLLVDIISRSLANLPIPKMMRWGDKTEQFVRPVHTVTLFFGGELIEGEILGVKIANVVRGHRFLGEREFTISHADEYLTALREKGSVIADFNERKALILAKSQEKATALGGVADIEEDLLDEVTSLVEFPNVLTAKFEERFLAVPAEALVYTMKGDQKYFPIYDKDGKLLPHFIFVSNINPEDPTAIIEGNEKVVRPRLTDAEFFFKTDLKQRLEDRLPRLETVLFQQQLGTLRDKTARIEALAGEIAAQIGADKAKAERAGLLSKCDLMTNMVFEFTDTQGVMGMHYARHDGEDEEVAVALNEQYMPRFAGDELPKSLVACSVALADKFDTLTGIFGIGQAPKGSADPFALRRAALGSLRIIVEKNLPLDLEDLVRKSAALFGDKLTNANVVDDVVDFMLGRFRAWYQDEGIAVDVIQAVLARRPTKPADFDARVRAVSHFRTLDSAEALAAANKRVSNILAKVEGEISTEIDRSLLVEAEEKALAEQVISLQTELAPTFANGEYQTALDRLASLRETVDSFFEKVMVNAEDANLRRNRQAILNNLRNLFLQVADISVLQ

Annotated regions:
phrase: RVSNILAKVEGEISTEIDRSLLVEAEEKALAEQVISLQTELAPTFANGEYQTALDRLASLRETVDSFFEKVMVNAEDANLRRNRQAILNNLRNLFLQVADISV
type: DOMAIN
name: DALR_anticod-bd
description: DALR anticodon binding

phrase: AANKRVSNILAKVEGEISTEIDRSLLVEAEEKALAEQVISLQTELAPTFANGEYQTALDRLASLRETVDSFFEKVMVNAEDANLRRNRQAILNNLRNL
type: DOMAIN
name: DALR_anticod-bd
description: DALR anticodon binding
Protein sequence:
MSNEVEQKKNIKTINDLPGISQTVINKLIEAGYSSLETLAVASPQDLSVAAGIPLSTAQKIIKEARDALDIRFKTALEVKKERMNVKKISTGSQALDGLLAGGIETRTMTEFFGEFGSGKTQLCHQLSVNVQLPPEKGGLSGKAVYIDTEGTFRWERIENMAKALGLDIDNVMNNIYYIRAINTDHQIAIVDDLQELVSKDPSIKLIVVDSVTSHFRAEYPGRENLAVRQQKLNKHLHQLTRLAEVYDIAVIITNQVMARPDMFYGDPTVAVGGHTLYHVPGIRIQLKKSRGNRRIARVVDAPHLPEGEVVFALTEEGIRDAEE

Annotated regions:
phrase: TRTMTEFFGEFGSGKTQLCHQLSVNVQLPPEKGGLSGKAVYIDTEGTFRWERIENMAKALGLDIDNVMNNIYYIRAINTDHQIAIVDDLQELVSKDPSIKLIVVDSVTSHFRAEYPGRENLAVRQQKLNKHLHQLTRLAEVYDIAVIITNQVMARPDMFYGDPTVAVGGHTLYHVPGIRIQLKKS
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: RMNVKKISTGSQALDGLLAGGIETRTMTEFFGEFGSGKTQLCHQLSVNVQLPPEKGGLSGKAVYIDTEGTFRWERIENMAKALGLDIDNVMNNIYYIRAINTDHQIAIVDDLQELVSKDPSIKLIVVDSVTSHFRAEYPGRENLAVRQQKLNKHLHQLTRLAEVYDIAVIITNQVMARPDMFYGDPTVAVGGHTLYHVPGIRIQLKKSRGNRRIARVVDAPHLPEGEVVFALTEEGIRD
type: DOMAIN
name: DNA_recomb/repair_Rad51_C
description: DNA recombination and repair protein Rad51-like, C-terminal

phrase: NVKKISTGSQALDGLLAGGIETRTMTEFFGEFGSGKTQLCHQLSVNVQLPPEKGGLSGKAVYIDTEGTFRWERIENMAKALGLDIDNVMNNIYYIRAINTDHQIAIVDDLQELVSKDPSIKLIVVDSVTSHFRAEYPGRENLAVRQQKLNKHLHQLTRLAEVYDIAVIITNQ
type: DOMAIN
name: RecA_ATP-bd
description: DNA recombination and repair protein RecA-like, ATP-binding domain

phrase: DMFYGDPTVAVGGHTLYHVPGIRIQLKKSRGNRRIARVVDAPHLPEGEVVFALTEEGIRDAE
type: DOMAIN
name: RecA_monomer-monomer_interface
description: DNA recombination and repair protein RecA, monomer-monomer interface
Protein sequence:
MGTFTLHQGQSNLIKSFFRNYYLNAELGLPNDMELREFALQPFGSDMYIRHLSFSSSEELRDYLVNRNLPLHLFYSSARYQLPSARDMEEKAWMGSDLLFDIDADHICKLRSIRFCPVCGNAITSEKCERDNVETLEYVEMTSECIKRGLEEARNLVEILEDDFGLKPKVYFSGNRGFHVQVDCYGDCALLDSDERKEIAEYVMGVGVPSYPGGSESAPGWVGRKNRGINGVTIDGQVTIDVKRLIRIPNSLHGKSGLIVKEVTNLDDFEFNEALSPFTGYTIFLPYISIETEVLSRNIKLNRGVPIKIESSIGIYLHLKNLGEVKAYVR

Annotated regions:
Protein sequence:
MKSNKKSNRLRAIYRALVIAIGLAVIIVFNYFNRKNNNARSSRRACSCFFSLTGVNLEKIGTFDTDAKLIVLNHQSLLDIIYLEAYHPRNICWIAKKELGEIPFYGHALTDTGMILIDREDKKGIVSLLKACKEKLDQNRPLVIFPEGTRGKGGEKFLPFKQGAKIIAEKFQLKIQPMVLINSIKIFNSKPLEAYKARTRLVMLESYTPDFNSPTWYEELQERMQKEYLKHYHELNPSEQ

Annotated regions:
phrase: GVNLEKIGTFDTDAKLIVLNHQSLLDIIYLEAYHPRNICWIAKKELGEIPFYGHALTDTGMILIDREDKKGIVSLLKACKEKLDQNRPLVIFPEGTRGKGGEKFLPFKQGAKIIAEKFQLKIQPMV
type: DOMAIN
name: AGP_acyltrans
description: 1-acyl-sn-glycerol-3-phosphate acyltransferase

phrase: KLIVLNHQSLLDIIYLEAYHPRNICWIAKKELGEIPFYGHALTDTGMILIDREDKKGIVSLLKACKEKLDQNRPLVIFPEGTRGKGGEKFLPFKQGAKIIAEKFQLKIQPMV
type: DOMAIN
name: Plipid/glycerol_acylTrfase
description: Phospholipid/glycerol acyltransferase

phrase: KLIVLNHQSLLDIIYLEAYHPRNICWIAKKELGEIPFYGHALTDTGMILIDREDKKGIVSLLKACKEKLDQNRPLVIFPEGTRGKGGEKFLPFKQGAKIIAEKFQLKIQPMVLIN
type: DOMAIN
name: Plipid/glycerol_acylTrfase
description: Phospholipid/glycerol acyltransferase
Protein sequence:
MDILPYLTKIILLSSIGITIASIIVETNLISKIKKITKPICLISNLPEECVVSLLGNFINPTVGKSMLSGFYKENKVNEKEVIVTTIISPLPTILGESVFRVQLPLAVVILGYKLGLIYVSLNVISGFLQALIGILYANIFFERRQINIDNNNNEKIVFNREVIIKGFKKSLKILKKVIPMIVIFTLLINFLIKLGLMDVVKGLFSPIFRILDLPGEAITVLIANLAHFSAGYTTVDILIKNGVLNEKQALIVLLIGNIISVTMIYLKHSIGTYISLFGRFGLKLAVINYTISVMIKILLILLLIAFF

Annotated regions:
phrase: KIILLSSIGITIASIIVETNLISKIKKITKPICLISNLPEECVVSLLGNFINPTVGKSMLSGFYKENKVNEKEVIVTTIISPLPTILG
type: DOMAIN
name: Gate_dom
description: Nucleoside transporter/FeoB GTPase, Gate domain

phrase: LKKVIPMIVIFTLLINFLIKLGLMDVVKGLFSPIFRILDLPGEAITVLIANLAHFSAGYTTVDILIKNGVLNEKQALIVLLIGNIISVTMIYLKHSIGTYISLF
type: DOMAIN
name: Gate_dom
description: Nucleoside transporter/FeoB GTPase, Gate domain
Protein sequence:
MAKSQAGQTVEPEASKLWIHCNSCCALFCDKKHTFFLLACHHVFCERCVKVSAGRTPSDAPIFECSTCRRSVRGRQLTNSMPNHFKQLFHPEPFTIGNDFVETFQRGNHRHFDKYKERKELEMDKLFKDIEVAKSVCQKRFLEAQMLRVERKKLMQRSRYIKAEVANRKAEMHRMAQAYRSRSLTSQSSSSAQRSARGRPRGRGTATQSSSRRRSTESAKRQQITSFIHPPNNSFDL

Annotated regions:
phrase: CHHVFCERC
type: CONSERVED_SITE
name: Znf_RING_CS
description: Zinc finger, RING-type, conserved site

phrase: CNSCCALFCDKKHTFFLLACHHVFCERCVKVSAGRTPSDAPIFECSTC
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type

phrase: HCNSCCALFCDKKHTFFLLACHHVFCERCVKVSAGRTPSDAPIFECSTCR
type: DOMAIN
name: Znf_RING
description: Zinc finger, RING-type
Protein sequence:
MTGNIDQLMKDMARDLLGEDVIDVLSFLLDNKTELTDEEMANKLNVKVNEVRKKLYALAEHGLVSYRRTRDKETGWYVYYWKANVDQINELLLSRKREILNKLKARLEYETNNEFYICPEDKTKYTFEEAFENEFKCPKCGVQLVYYDSAKMREFLERKIKEIEEEIARETKVGSS

Annotated regions:
phrase: IDQLMKDMARDLLGEDVIDVLSFLLDNKTELTDEEMANKLNVKVNEVRKKLYALAEHGLVSYRRTRDKETGWYVYYWKANVDQI
type: DOMAIN
name: TFIIE/TFIIEa_HTH
description: Transcription factor TFE/TFIIEalpha HTH domain

phrase: LMKDMARDLLGEDVIDVLSFLLDNKTELTDEEMANKLNVKVNEVRKKLYALAEHGLVSYRRTRDKETGWYVYYWKANVDQINELLLSRKREILNKLKARLEYET
type: DOMAIN
name: TFIIEa/SarR/Rpc3_HTH_dom
description: TFIIEalpha/SarR/Rpc3 HTH domain

phrase: EDVIDVLSFLLDNKTELTDEEMANKLNVKVNEVRKKLYALAEHGLVSYRRTRDKETGWYVYYWKANVDQINELLLSRKREILNKLKARLEYETNNEFYICPEDKTKYTFEEAFENEFKCPKCGVQLVYYDSAKMREFLE
type: DOMAIN
name: TFIIE_asu
description: Transcription initiation factor IIE subunit alpha, N-terminal
Protein sequence:
MDTIFAVSSGLLPSGVAVIRVSGPRVVDIVKTLCGCLPKARFMHHGDLIARDGSFLDSALTVFFPRPHSFTGEDCAEFHLHGGKAVVNRFLDELSTFTGCRLAEAGEFSRRAFIEGKIDLVQAEGLADLIEAETESQRRLAVMGANGHLTELYRHWRNKLMTARALIEAELDFSDEADVSNFSSDKVWQNMQELSDSLCEHIAEGERANILRDGIKVVIVGVPNSGKSSIINRLAGRPVAIVTEEEGTTRDALEVRLILGGLPVLVMDTAGFRETESKIEQLGIDIAKQHVLDADLVILVDDMKNPQKISLPNTSAEIWRVGNKLDICEGDKTRWPIQFSALNGLNFDYFLKEIESFCLHRIAEIGNIFPARKRQIQLLKEAVKEIDSSINYTFLDLSLRAEHLRRASDALGRITGDIDVEDLLDIIFSQFCIGK

Annotated regions:
phrase: DTIFAVSSGLLPSGVAVIRVSGPRVVDIVKTLCGCLPKARFMHHGDLIARDGSFLDSALTVFFPRPHSFTGEDCAEFHLHGGKAVVNRFLDELSTFTGCRLAEAGEFSRRAFIE
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal

phrase: LVQAEGLADLIEAETESQRRLAVMGANGHLTELYRHWRNKLMTARALIEAELDFSDEADVSNFSSDKVWQNMQELSDSLCEHIAEGERANILRDGIKVVIVGVPNSGKSSIINRLAGRPVAIVTEEEGTTRDALEVRLILGGLPVLVMDTAGFRETESKIEQLGIDIAKQHVLDADLVILVDDMKNPQKISLPNTSAEIWRVGNKLDICEGDKTRWPIQFSALNGLNFDYFLKEIESFCLHRIAEIGNIFPARKRQIQLLKEAVKEIDSSINYTFLDLSLRAEHLRRASDALGRITGDIDVEDLLDIIFSQF
type: DOMAIN
name: MnmE_helical
description: MnmE, helical domain

phrase: GIKVVIVGVPNSGKSSIINRLAGRPVAIVTEEEGTTRDALEVRLILGGLPVLVMDTAGFRETESKIEQLGIDIAKQHVLDADLVILVDDMKNPQKISLPNTSAEIWRVGNKLDICEGDKTRWPIQFSALNGLNFDYFLKEIESFC
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain

phrase: RDGIKVVIVGVPNSGKSSIINRLAGRPVAIVTEEEGTTRDALEVRLILGGLPVLVMDTAGFRETESKIEQLGIDIAKQHVLDADLVILVDDMKNPQKISLPNTSAEIWRVGNKLDICEGDKTRWPIQFSALNGLNFDYFLKEIESF
type: DOMAIN
name: G_TrmE
description: TrmE-type guanine nucleotide-binding domain

phrase: KVVIVGVPNSGKSSIINRLAGRPVAIVTEEEGTTRDALEVRLILGGLPVLVMDTAGFRETESKIEQLGIDIAKQHVLDADLVILVDDMK
type: DOMAIN
name: GTP-bd
description: GTP binding domain

phrase: GIKVVIVGVPNSGKSSIINRLAGRPVAIVTEEEGTTRDALEVRLILGGLPVLVMDTAGFRETESKIEQLGIDIAKQHVLDADLVILVDDMKNP
type: DOMAIN
name: Small_GTP-bd
description: Small GTP-binding domain

phrase: TIFAVSSGLLPSGVAVIRVSGPRVVDIVKTLCGCLPKARFMHHGDLIARDGSFLDSALTVFFPRPHSFTGEDCAEFHLHGGKAVVNRFLDELSTFTGCRLAEAGEFSRRAFIEG
type: DOMAIN
name: GTP-bd_TrmE_N
description: GTP-binding protein TrmE, N-terminal
Protein sequence:
MNPSEMQRKAPPRRRRHRNRAPLTHKMNKMVTSEEQMKLPSTKKAEPPTWAQLKKLTQLATKYLENTKVTQTPESMLLAALMIVSMVVSLPMPAGAAAANYTYWAYVPFPPLIRAVTWMDNPIEVYVNDSVWVPGPIDDRCPAKPEEEGMMINISIGYRYPPICLGTAPGCLMPAVQNWLVEVPIVSPISRFTYHMVSGMSLRPRVNYLQDFSYQRSLKFRPKGKPCPKEIPKESKNTEVLVWEECVANSAVILQNNEFGTIIDWAPRGQFYHNCSGQTQSCPSAQVSPAVDSDLTESLDKHKHKKLQSFYPWEWGEKGISTPRPKIVSPVSGPEHPELWRLTVASHHIRIWSGNQTLETRDRKPFYTVDLNSSLTVPLQSCVKPPYMLVVGNIVIKPDSQTITCENCRLLTCIDSTFNWQHRILLVRAREGVWIPVSMDRPWEASPSIHILTEVLKGVLNRSKRFIFTLIAVIMGLIAVTATGAVAGVALHSSVQSVNFVNDWQKNSTRLWNSQSSIDQKLANQINDLRQTVIWMGDRLMSLEHRFQLQCDWNTSDFCITPQIYNESEHHWDMVRRHLQGREDNLTLDISKLKEQIFKASKAHLNLVPGTEAIAGVADGLANLNPVTWVKTIGSTTIINLILILVCLFCLLLVCRCTQQL

Annotated regions:
phrase: AVTWMDNPIEVYVNDSVWVPGPIDDRCPAKPEEEGMMINISIGYRYPPICLGTAPGCLMPAVQNWLVEVPIVSPISRFTYHMVSGMSLRPRVNYLQDFSYQRSLKFRPKGKPCPKEIPKESKNTEVLVWEECVANSAVILQNNEFGTIIDWAPRGQFYHNCSGQTQSC
type: DOMAIN
name: HERV-K_env
description: Retro-transcribing virus envelope glycoprotein

phrase: VNDWQKNSTRLWNSQSSIDQKLANQINDLRQTVIWMGDRLMSLEHRFQLQCDWNTSDFCITPQIYNESEHHWDMVRRHLQGREDNLTLDISKLKEQIFKASKAHLNLVPGTEAIAGVADGLANLN
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like

phrase: VAGVALHSSVQSVNFVNDWQKNSTRLWNSQSSIDQKLANQINDLRQTVIWMGDRLMSLEHRFQLQCDWNTSDFCITPQIYNESEHHWDMVRRHLQGREDNLTLDISKLKEQIFKASKAHLNLVPGTEAIAGVADGLANLNPVTWVKTIGSTTIINLILILVCLFCLLLV
type: DOMAIN
name: GP41-like
description: Retroviral envelope protein GP41-like
Protein sequence:
MPTFTHRIYNFNAGPAMLPTEVMEEAKSEFLNFRGTGMSVMEMSHREKHFQSILDESISDLRELLNLPSRYAVVYFPGGATLQFSAIPFNYLSSGDSCDFALTGVWAKKAFEEAKKFYPNVKSIFNGADSKYMELPTITDESVNDGAKYMYITSNNTIYGTRYKTFPKLKKAPLIADMTSELLSRKLPIEDFSVIFAGAQKNIGPSGLTLVIYDKEKLPEVSHPIPNLMNFALMEKNGSLYNTPPTYSIYIAGLVFKYLKRKGGLAVMEETNERKAKKLYDAIDSSSLFYAPVPVPFRSAMNVVFRSHNDGLDSKFLSLAEEQGFAGLKGYREVGGFRASIYNAMPEEGVDALISFMKEFERSNG

Annotated regions:
phrase: IYNFNAGPAMLPTEVMEEAKSEFLNFRGTGMSVMEMSHREKHFQSILDESISDLRELLNLPSRYAVVYFPGGATLQFSAIPFNYLSSGDSCDFALTGVWAKKAFEEAKKFYPNVKSIFNGADSKYMELPTITDESVNDGAKYMYITSNNTIYGTRYKTFPKLKKAPLIADMTSELLSRKLPIEDFSVIFAGAQKNIGPSGLTLVIYDKEKLPEVSHPIPNLMNFALMEKNGSLYNTPPTYSIYIAGLVFKYLKRKGGLAVMEETNERKAKKLYDAIDSSSLFYAPVPVPFRSAMNVVFRSHNDGLDSKFLSLAEEQGFAGLKGYREVGGFRASIYNAMPEEGVDA
type: DOMAIN
name: Aminotrans_V_dom
description: Aminotransferase class V domain
Protein sequence:
MPRKIILDCDPGIDDAVAIFLAHGNPEIELLAITTVVGNQSLEKVTQNARLVADVAGIVGVPVAAGCTKPLVRGVRNASHIHGETGMGNVSYPPEFKTKLDGRHAVQLIIDLIMSHEPKTITLVPTGGLTNIAMAVRLEPRIVDRVKEVVLMGGGYHTGNASPVAEFNVFIDPEAAHIVFNESWNVTMVGLDLTHQALATPAVQKRVREVGTKPAAFMLQILDFYTKVYEKEHDTYGKVHDPCAVAYVIDPTVMTTERVPVDIELNGALTTGMTVVDFRYPRPKNCRTQVAVKLDFDKFWCLVIDALERIGDPQ

Annotated regions:
phrase: IILDCDPGIDDAVAIFLAHGNPEIELLAITTVVGNQSLEKVTQNARLVADVAGIVGVPVAAGCTKPLVRGVRNASHIHGETGMGNVSYPPEFKTKLDGRHAVQLIIDLIMSHEPKTITLVPTGGLTNIAMAVRLEPRIVDRVKEVVLMGGGYHTGNASPVAEFNVFIDPEAAHIVFNESWNVTMVGLDLTHQALATPAVQKRVREVGTKPAAFMLQILDFYTKVYEKEHDTYGKVHDPCAVAYVIDPTVMTTERVPVDIELNGALTTGMTVVDFRYPRPKNCRTQVAVKLDFDKF
type: DOMAIN
name: Inosine/uridine_hydrolase_dom
description: Inosine/uridine-preferring nucleoside hydrolase domain

phrase: DCDPGIDDAV
type: CONSERVED_SITE
name: I/U_nuclsd_hydro_CS
description: Inosine/uridine-preferring nucleoside hydrolase, conserved site
Protein sequence:
METDNGKGLILAVASSVFIGSSFILKKKGLKRAGAIGTRAGYGGYTYLLEPLWWAGMVTMIVGEAANFVAYIYAPAVLVTPLGALSIIISAVLAHFLLKEKLKKMGVLGCVSCIVGSVVIVIHAPKEQTPNSVEEIWNLATQPAFLIYVAITMSIVLALILHFEPLCGQTNILVYIGICSLMGALTVMSIKAIGIAIKLTMEGVSQIGYPQTWLFVMVAVTCVVTQLIYLNKALDTFNAAIVSPVYYVMFTTLTIVASAIMFKDWSGQDAASVASELCGFITVLTGTMILHGTREEEQQQASSEHVRWYDSRKSMNEEHLVSLYSPEY

Annotated regions:
Protein sequence:
MSKEELKRAAAARALEYVSDGMQLGLGTGSTAKHFVELLGERVRAGLRVVGVPTSEGTRADAERCGVPLTTLDDVDHLDLTVDGADEIAPSLDVIKGGGGALLREKIVAAASTRMVVISDDSKWVETLGRFPLPVEVIPFGLGATRRALATAFAEAGVTGEITLRQGPDGHAFVTDGGHWILDAHLGRIPEPPRLAALLSAIPGVVEHGLFIGLAKTAILAGSQGIRIVDRPRGRV

Annotated regions:
Protein sequence:
MTVEQREASRLGPLFDSCRAENRAALIGYLPTGYPDVNTSVRAMTELVESGCDIVEVGVPYSDPGMDGPTIQRATEAALSGGVRVRDALTAVESISKAGGRAVVMTYWNPVLRYGGDAFARDLAAAGGHGLITPDLIPDEAQQWLAASDAHGLDRIFLVAPSSTPERLANTVAASRGFVYAASTMGVTGARDAVSNAAPDLVARVKAVSDIPVGVGLGVRSREQAAEIGRYADGVIVGSALVSALGDGLPSLRSLTEELAAGVRQRKSP

Annotated regions:
phrase: VEVGVPYSDPGMD
type: ACTIVE_SITE
name: Trp_synthase_alpha_AS
description: Tryptophan synthase, alpha chain, active site
Protein sequence:
MSLLKNLLAPCLALLLAGCAALGPHESVEGPGNTAAWKEHRSHVATLDGWQISGKIGIRAPQESGSGTLFWLQRQDYFDIRLSGPLGRGATRLTGRPDAVSLEVAGQGRFEAESPEALVEAQLGWQLPVSHLLWWVRGLPAPDSRSRLSIDSESRLARLEQDGWQVEYLAYAEHNGFVLPERIRLQGHDLQITLVIKDWQPRQLGR

Annotated regions:
Protein sequence:
MADVNPTRMELLKLKSKIKLAEKGHKLLKQKRDALMMEFFEILNQASGIRDKVNVALSKAYKDLIMAQALMGTLSVKEASFAAKNDTIELDVDMRNIMGIGVPVFELQNVKRDISNRGYSPYGVSSKLDEAAKNFEEALELISELAEIETSIKLLAQEIITTKRRVNALEYVVIPRMNETKKYIGMRLDEMERENFFRLKLIKARIDAREAEEA

Annotated regions:
Protein sequence:
MQPITQIPLTFDTVVNLLGSASGIGWILNYILMTYYSFRDKTYSMSMLPLCCNIAWEFVYGILCPSSTFVVRPVILSWLVLNCLVVYAAIKYSPNEWAHAPLVQRHLPLLFTVGIAACTGFHIALIRKFDPATAFLWSARSCQVLLSIGGLFQLLCRSSTKGGSYVLWLSRFLGSICGVLKMTLMWKYGESRFPWLDDPLTAYCIALWIISDVLYGVVFYSLRSKELAGAGKAKAI

Annotated regions:
Protein sequence:
MPKLLLASNNRGKLREYASLLSGSGFELVTPADMGIDITVAETGTTFEENARLKAAALAEASGLLTLADDSGLAVDALGGEPGVYSARYAGENATDTDRNAYLLSKMHTIPAEKRTARFCCVIAIAQPGHIIATFEGTCEGFIGTEPRGTNGFGYDPVFYLPEYGKTMAELPSEIKNSISHRSIAAQKASRFLAQMATN

Annotated regions:
Protein sequence:
MTTVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNVASKKGKVLFVGTKRAAGEAIKEAAISCDQYYVDHRWLGGMLTNWKTVRQSIKRLKELESQSVDGTFDKLTKKEALMRTRELEKLEKSLGGIKNMGGLPDVLFVIGADHEHIAIKEANNLGIPVVAVVDTNSAPDGVNYIVPGNDDAMRAIRLYTTSVAAAANAGRGQDLAVQAEQDGFVEAE

Annotated regions:
phrase: MRDMLQAGVHF
type: CONSERVED_SITE
name: Ribosomal_uS2_CS
description: Small ribosomal subunit protein uS2, conserved site

phrase: PDVLFVIGADHEHIAIKEANNLGI
type: CONSERVED_SITE
name: Ribosomal_uS2_CS
description: Small ribosomal subunit protein uS2, conserved site