nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MDTLMPVALIDDDKDLRRATAQTLELAGFSVSAYDGAKAALADLPADFAGPVVTDIRMPEIDGLQLFATLQGMDVDLPVILMTGHGDIPMAVQAIQDGAYDFIAKPFAADRLVQSVRRASEKRRLVLENRMLRKAAEDAQENLPLIGQTPVMENLRNILRHIADTDVDVLVAGETGSGKEVVAQILHQWSHRRKGNFVALNCGALPETVIESELFGHERGAFTGAQKRRTGRIEHASGGTLFLDEIESMPAATQVKMLRVLEMREITPLGTNEVRPVNLRVVAAAKIDLGDPAVRGDFREDLYYRLNVVTISIPPLRERRDDIPLLFSHFAARAAERFRRDVPPLSPDVRRHLASHTWPGNVRELSHYAERVVLGVEGGGAAAVPPQPTGATLPERLERYEAEIIRDTLSANDGDVRRTIEALGIPRKTFYDKLQRHGINRGGYSSRK

Annotated regions:
phrase: MPVALIDDDKDLRRATAQTLELAGFSVSAYDGAKAALADLPADFAGPVVTDIRMPEIDGLQLFATLQGMDVDLPVILMTGHGDIPMAVQAIQDGAYDFIAKPFAADRLVQS
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: VALIDDDKDLRRATAQTLELAGFSVSAYDGAKAALADLPADFAGPVVTDIRMPEIDGLQLFATLQGMDVDLPVILMTGHGDIPMAVQAIQDGAYDFIAKPFAADRLVQS
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain

phrase: GRIEHASGGTLFLDE
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_2
description: Sigma-54 interaction domain, ATP-binding site 2

phrase: LERYEAEIIRDTLSANDGDVRRTIEALGIPRKTFYDKLQ
type: DOMAIN
name: HTH_Fis
description: DNA binding HTH domain, Fis-type

phrase: VLVAGETGSGKEV
type: BINDING_SITE
name: Sigma_54_int_dom_ATP-bd_1
description: Sigma-54 interaction domain, ATP-binding site 1

phrase: WPGNVRELS
type: CONSERVED_SITE
name: Sigma_54_int_dom_CS
description: Sigma-54 interaction domain, conserved site

phrase: LIGQTPVMENLRNILRHIADTDVDVLVAGETGSGKEVVAQILHQWSHRRKGNFVALNCGALPETVIESELFGHERGAFTGAQKRRTGRIEHASGGTLFLDEIESMPAATQVKMLRVLEMREITPLGTNEVRPVNLRVVAAAKIDLGDPAVRGDFREDLYYRLNVVT
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: LIGQTPVMENLRNILRHIADTDVDVLVAGETGSGKEVVAQILHQWSHRRKGNFVALNCGALPETVIESELFGHERGAFTGAQKRRTGRIEHASGGTLFLDEIESMPAATQVKMLRVLEMREITPLGTNEVRPVNLRVVAAAKIDLGDPAVRGDFREDLYYRLNVVTISIPPLRERRDDIPLLFSHFAARAAERFRRDVPPLSPDVRRHLASHTWPGNVRELSHYAERVV
type: DOMAIN
name: Sigma_54_int
description: RNA polymerase sigma factor 54 interaction domain

phrase: TDVDVLVAGETGSGKEVVAQILHQWSHRRKGNFVALNCGALPETVIESELFGHERGAFTGAQKRRTGRIEHASGGTLFLDEIESMPAATQVKMLRVLEMREITPLGTNEVRPVNLRVVAAAKIDLGDPAVRGDFREDLYYRLN
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: PVALIDDDKDLRRATAQTLELAGFSVSAYDGAKAALADLPADFAGPVVTDIRMPEIDGLQLFATLQGMDVDLPVILMTGHGDIPMAVQAIQDGAYDFIAKPFAADRLVQSVRRA
type: DOMAIN
name: Sig_transdc_resp-reg_receiver
description: Signal transduction response regulator, receiver domain
Protein sequence:
MLPAYLSNPFAAVFGGGKPIDGGRTYKDGRRILGDGKTYRGLFSGIFCGFLAGCIEIWLSMRGFEIMGIKMPTFGPNYASALIVVLALPSGALFGDMFKSFFKRRMGLKRGASLPLVDQLDFVVGAWFFTYLAAPEWFVSNFTTGIALTVLIMTPLLHLTTNIIGYFIGVKKEPW

Annotated regions:
Protein sequence:
MRSKGYRRGTRYLFSQDHRKHGVAHVSKYLEKYEIGDMVDILVNPAMMKGMPHKYYHGRTGRVYDVKPRSLNVALYKRVRGKYVIKKIIVRIEHVRKSRCSEESQKRILMAAEMARDAESRGVVLAPSKRKIEGPRKAVEVSLDNNQPIEVGYEPHVVIF

Annotated regions:
phrase: GDMVDILVNPAMMKGMPHKYYHGRT
type: CONSERVED_SITE
name: Ribosomal_eL21_CS
description: Large ribosomal subunit protein eL21, conserved site
Protein sequence:
MEERLVSGEVLGEETALEPSLRPQYLHEYIGQDKIKENLKVFIEAAKLREETLDHVLLYGPPGLGKTTLAVIIANEMGVKLRATSGPALERPGDLAALLTSLEPGDVLFIDEIHRLPRAVEEVLYPAMEDYCLDITIGKGPDARTLRLDLPPFTLVGATTRAGALSAPLRDRFGVISRLEYYHVDQLAQIIERAAAILQIGIEREAALELARRARGTPRIANRLLRRVRDFAQVRGEGGITLPLAVEALERLQVDRLGLDQIDHKLLSAMIEKFAGGPVGLETLAAVIGEEAQTIEEVYEPYLMQIGLLQRTPRGRVVTPAAYTHLGMEVPKR

Annotated regions:
phrase: TLDHVLLYGPPGLGKTTLAVIIANEMGVKLRATSGPALERPGDLAALLTSLEPGDVLFIDEIHRLPRAVEEVLYPAMEDYCLDITIGKGPDARTLRLDLPPFTLVGATTRAGALSAPLRDRFGVISRLEYY
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: YHVDQLAQIIERAAAILQIGIEREAALELARRARGTPRIANRLLRRVRDFAQVRGEGGITLPLAVEALERLQV
type: DOMAIN
name: AAA_lid_4
description: RuvB, AAA lid domain

phrase: LGLDQIDHKLLSAMIEKFAGGPVGLETLAAVIGEEAQTIEEVYEPYLMQIGLLQRTPRGRVVTPAAYTH
type: DOMAIN
name: RuvB_C
description: RuvB C-terminal winged helix domain

phrase: LRPQYLHEYIGQDKIKENLKVFIEAAKLREETLDHVLLYGPPGLGKTTLAVIIANEMGVKLRATSGPALERPGDLAALLTSLEPGDVLFIDEIHRLPRAVEEVLYPAMEDYCLDITIGKGPDARTLRLDLPPFTLVGATTRAGALSAPLRDRFGVISR
type: DOMAIN
name: RuvB-like_N
description: RuvB-like P-loop domain
Protein sequence:
MPNSKYVFVTGGVTSSLGKGIISASLAKLLQARGLRTTIQKFDPYINVDPGTLNPYEHGECYVTDDGAETDLDLGHYERFLNVKTSQANNVTTGRIYQSVIEKERRGDFLGKTVQVIPHITNEIKARMQLLGKGDEHDVVITEIGGTVGDIESLPYIEAVRQLRWELGRENCVVIHLTLVPFLSAAKELKTKPTQHSVKTLMESGINADVLVCRTEHELSDDLRKKLALFCNVEQEAVIQSIDAETIYDVPILMYEEGLDQVVMKRLGIEDENQPDLTHWKNFLKRHKNPKSTVTIGLIGKYVELQDSYKSILESFVHAGAANEVEVKVVPIHSSYLEEXDVQEKIXNLDGXLVAPGFGERGIEGKINAVKYVREHQIPXFGICLGMQMAVIEYARNVLQLXTAXSVEMDADTPXPVIXLMXEQRNXIQKGGTMRLGAWTCAIEKDXLXHKVYXNDRIEERHRHRYEFNDXYYEQYQAHGMIASGVNPETKLVEAIELPAHPWFVGVQYHPEXSSTVAXPHPLFVGFVNAXNRYAXSKK

Annotated regions:
phrase: VTIGLIGKYVELQDSYKSILESFVHAGAANEVEVKVVPIHSSYLEEXDVQEKIXNLDGXLVAPGFGERGIEGKINAVKYVREHQIPXFGICLGMQMAVIEYARNVLQLXTAXSVEMDADTPXPVIXLMXEQRNXIQKGGTMRLGAWTCAIEKDXLXHKVYXNDRIEERHRHRYEFNDXYYEQYQAHGMIASGVNPETKLVEAIELPAHPWFVGVQYHPEXSSTVAXPHPLFVGF
type: DOMAIN
name: GATase1_CTP_Synthase
description: CTP synthase GATase domain

phrase: KYVFVTGGVTSSLGKGIISASLAKLLQARGLRTTIQKFDPYINVDPGTLNPYEHGECYVTDDGAETDLDLGHYERFLNVKTSQANNVTTGRIYQSVIEKERRGDFLGKTVQVIPHITNEIKARMQLLGKGDEHDVVITEIGGTVGDIESLPYIEAVRQLRWELGRENCVVIHLTLVPFLSAAKELKTKPTQHSVKTLMESGINADVLVCRTEHELSDDLRKKLALFCNVEQEAVIQSIDAETIYDVPILMYEEGLDQVVMKRLG
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: KYVFVTGGVTSSLGKGIISASLAKLLQARGLRTTIQKFDPYINVDPGTLNPYEHGECYVTDDGAETDLDLGHYERFLNVKTSQANNVTTGRIYQSVIEKERRGDFLGKTVQVIPHITNEIKARMQLLGKGDEHDVVITEIGGTVGDIESLPYIEAVRQLRWELGRENCVVIHLTLVPFLSAAKELKTKPTQHSVKTLMESGINADVLVCRTEHELSDDLRKKLALFCNVEQEAVIQSIDAETIYDVPILMYEEGLDQVVM
type: DOMAIN
name: CTP_synthase_N
description: CTP synthase, N-terminal

phrase: LQDSYKSILESFVHAGAANEVEVKVVPIHSSYLEEXDVQEKIXNLDGXLVAPGFGERGIEGKINAVKYVREHQIPXFGICLGMQMAVIEYARNVLQLXTAXSVEMDADTPXPVIXLMXEQRNXIQKGGTMRLGAWTCAIEKDXLXHKVYXNDRIEERHRHRYEFNDXYYEQYQAHGMIASGVNPETKLVEAIELPAHPWFVGVQYHPEXSSTVAXPHPLFVGFV
type: DOMAIN
name: GATASE
description: Glutamine amidotransferase
Protein sequence:
MILGSTGSIGTQAIDLVLRNPDRFRVTGLSAAGGRVGLLAEQAHRLRVSTVAVAREDVVPVLREALTAQYGPGEPLPEILAGADAATQLAASDCHTVLNGITGSIGLAPTLAALEAGRTLALANKESLIVGGPLVKALAKPGQIIPVDSEHAALFQALAAGTRADVRKLVVTASGGPFRGRTKAELANVSPEHALAHPTWAMGPVITINSATLVNKGLEVIEAHLLYDIPFERIEVVVHPQSYVHSMVEFTDGSTLAQATPPDMRGPIAIGLGWPERVPDAAPAFDWTKASSWEFFPLDNDAFPSVGLARHVGQLAGTAPAVFNAANEECVDAFLNGTLPFNGIMETVTRVVEEHGTPRTGTSLTVADVLEAETWARARARELTVQTATAEARA

Annotated regions:
phrase: PPDMRGPIAIGLGWPERVPDAAPAFDWTKASSWEFFPLDNDAFPSVGLARHVGQLAGTAPAVFNAANEECVDAFLNGTLPFNGIMETVTRVVEEHGTPRTGTSLTVADVLEAETWAR
type: DOMAIN
name: DXPR_C
description: DXP reductoisomerase, C-terminal domain

phrase: MILGSTGSIGTQAIDLVLRNPDRFRVTGLSAAGGRVGLLAEQAHRLRVSTVAVAREDVVPVLREALTAQYGPGEPLPEILAGADAATQLAASDCHTVLNGITGSIGLAPTLAALEAGRTLALANKESLIVG
type: DOMAIN
name: DXP_reductoisomerase_N
description: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal

phrase: IIPVDSEHAALFQALAAGTRADVRKLVVTASGGPFRGRTKAELANVSPEHALAHPTWAMGPVITINSATLVNKGLEVIEAHLL
type: DOMAIN
name: DXP_reductoisomerase_C
description: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal
Protein sequence:
MSGEESAGMDFSQKTLQDYEVLAVMGNGSFGTCYKVRDKSTGELFAWKGMNYDELDEAKCDALVSEISVLRQLQHPNIVQYYHHLVNREAKSVYIVMECCAGGDLAQIVQRARSQRQRFEEPYIWRVLFQLCRALQVCHNKIPNGTILHRDIKPANIFLDAAGNAKLGDFGLARMLRRDQSFAASFVGTPHYMSPELVKGRKYDRKSDVWAVGCLVYEMCALRPPFRGRAFDQLSEKIAQGEFSRIPAIYSTDLQEIIAFMLAVDHEQRPGIEVIIRHPLVVRNISELDGKFPILVDSGEDFYTLPSGARLFEDEEEDGVHPELSSTMFTEQYSFNEGYGQRRLSVTGVFTPDLRSELFYSAKRKIFPAKKLQLSDPSLYESIRREERAEERQVELAEERRRKKDQEQQKRDQELLKEAPSSPRALTQNIFDEVLKTRLHAIRAQESLLQQKLEELQTREQELQLAEQRVQTLERQMQEKLLQQEKHTCSCRQPIAPPIPPRKPAKSHHDDTYCTIELNETSPTVAKLNLATLPAPKSLNTLRKVTFKSPQKFVTYGIENMPPPAVKPAVNPPPTGVPMQMSVSSNDSGDSQASSTRRKSILSLFGLSRGSKATSKSLPSVNQVAQAAATRVQRPPLAVKPPITQEQPAEVPPVANLWTKEQKKQAFELLAAMNAAEREASGGGVVGSGPGGARRQHLRQSVRERNSTLQRNRMRRSLVVATGHQKLTTRDQMVI

Annotated regions:
phrase: YEVLAVMGNGSFGTCYKVRDKSTGELFAWKGMNYDELDEAKCDALVSEISVLRQLQHPNIVQYYHHLVNREAKSVYIVMECCAGGDLAQIVQRARSQRQRFEEPYIWRVLFQLCRALQVCHNKIPNGTILHRDIKPANIFLDAAGNAKLGDFGLARMLRRDQSFAASFVGTPHYMSPELVKGRKYDRKSDVWAVGCLVYEMCALRPPFRGRAFDQLSEKIAQGEFSRIPAIYSTDLQEIIAFMLAVDHEQRPGIEVIIRHPL
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: YEVLAVMGNGSFGTCYKVRDKSTGELFAWKGMNYDELDEAKCDALVSEISVLRQLQHPNIVQYYHHLVNREAKSVYIVMECCAGGDLAQIVQRARSQRQRFEEPYIWRVLFQLCRALQVCHNKIPNGTILHRDIKPANIFLDAAGNAKLGDFGLARMLRRDQSFAASFVGTPHYMSPELVKGRKYDRKSDVWAVGCLVYEMCALRPPFRGRAFDQLSEKIAQGEFSRIPAIYSTDLQEIIAFMLAVDHEQRPGIEVIIRHPL
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain

phrase: ILHRDIKPANIF
type: ACTIVE_SITE
name: Ser/Thr_kinase_AS
description: Serine/threonine-protein kinase, active site

phrase: YEVLAVMGNGSFGTCYKVRDKSTGELFAWKGMNYDELDEAKCDALVSEISVLRQLQHPNIVQYYHHLVNREAKSVYIVMECCAGGDLAQIVQRARSQRQRFEEPYIWRVLFQLCRALQVCHNKIPNGTILHRDIKPANIFLDAAGNAKLGDFGLARMLRRDQSFAASFVGTPHYMSPELVKGRKYDRKSDVWAVGCLVYEMCALRPPFRGRAFDQLSEKIAQGEFSRIPAIYSTDLQEIIAFMLAVDHEQRPGIEVIIRHP
type: DOMAIN
name: Prot_kinase_dom
description: Protein kinase domain
Protein sequence:
MDNMNHEELNDQLLVRREKLHNLREQGIDPFGKRFERTNATNDLLSLYGEFSKEELEEKEISVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVRKDAVGDEEYELFKTADLGDLVGIEGKVFKTNVGELSVKATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMMHAIAGGASARPFITHHNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMKLTENMVAHIAKQVLGTTTIQYGDYEINLEPKWTRLHMVDAIKEHSGADFWNPMSVEEARELAKEHNVEIKDTMEVGHIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTELNDPIDQKERFEAQLKEREQGNDEAHMMDDDYIEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAMRHKQD

Annotated regions:
phrase: ESRETFVTRSKIIREMRRYLDDNGYLEVETPMMHAIAGGASARPFITHHNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMKLTENMVAHIAKQVLGTTTIQYGDYEINLEPKWTRLHMVDAIKEHSGADFWNPMSVEEARELAKEHNVEIKDTMEVGHIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTELNDPIDQKERFEAQLKEREQGNDEAHMMDDDYIEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPAM
type: DOMAIN
name: Lys-tRNA-synth_II_C
description: Lysyl-tRNA synthetase, class II, C-terminal

phrase: DDNGYLEVET
type: DOMAIN
name: Lys-tRNA-synth_II_C
description: Lysyl-tRNA synthetase, class II, C-terminal

phrase: AGGASARPFITHHNAL
type: DOMAIN
name: Lys-tRNA-synth_II_C
description: Lysyl-tRNA synthetase, class II, C-terminal

phrase: LKRLIVGGLEKVY
type: DOMAIN
name: Lys-tRNA-synth_II_C
description: Lysyl-tRNA synthetase, class II, C-terminal

phrase: FRNEGVSTRHNPEFTMI
type: DOMAIN
name: Lys-tRNA-synth_II_C
description: Lysyl-tRNA synthetase, class II, C-terminal

phrase: QPTFIYGHPVEISPLA
type: DOMAIN
name: Lys-tRNA-synth_II_C
description: Lysyl-tRNA synthetase, class II, C-terminal

phrase: FVTRSKIIREMRRYLDDNGYLEVETPMMHAIAGGASARPFITHHNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMKLTENMVAHIAKQVLGTTTIQYGDYEINLEPKWTRLHMVDAIKEHSGADFWNPMSVEEARELAKEHNVEIKDTMEVGHIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTELNDPIDQKERFEAQLKEREQGNDEAHMMDDDYIEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLF
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: VEQRYRQRYLDLITSMESRETFVTRSKIIREMRRYLDDNGYLEVETPMMHAIAGGASARPFITHHNALDMELYMRIAIELHLKRLIVGGLEKVYEIGRVFRNEGVSTRHNPEFTMIELYEAYADYKDIMKLTENMVAHIAKQVLGTTTIQYGDYEINLEPKWTRLHMVDAIKEHSGADFWNPMSVEEARELAKEHNVEIKDTMEVGHIINEFFEQKVEDKLIQPTFIYGHPVEISPLAKKNDEDPRFTDRFELFIVAREHANAFTELNDPIDQKERFEAQLKEREQGNDEAHMMDDDYIEALEYGMPPTGGLGIGIDRLVMLLTNAPSIRDVLLFPA
type: DOMAIN
name: Aa-tRNA-synt_II
description: Aminoacyl-tRNA synthetase, class II (D/K/N)

phrase: SVSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVRKDAVGDEEYELFKTADLGDLVGIEGKVFKTNVGELSVKATGFTLLTKSLRPLPDKYHGLKDVEQRYRQRYLD
type: DOMAIN
name: Lys-tRNA-ligase_II_N
description: Lysine-tRNA ligase, class II, N-terminal

phrase: VSIAGRIMTKRGKGKAGFAHIQDLHGQVQIYVRKDAVGDEEYELFKTADLGDLVGIEGKVFKTNVGELSVKATGFTL
type: DOMAIN
name: NA-bd_OB_tRNA
description: OB-fold nucleic acid binding domain, AA-tRNA synthetase-type
Protein sequence:
MNRTRSASMVQGGLNWDSLPLKLFAGGNAKFWNPADIDFSRDRADWERLTDDERSYATRLCAEFIAGEESVTQDIQPFMAAMRAEGRLGDEMYLTQFAFEEAKHVQVFRMWLDAVGVTDDLHHFLDDVPSYRTIFYEELPDCLNALTIDPSPAAQVRASVTYNHMVEGMLALTGYFGWHKICVERGILPGMQELVRRIGDDERRHMAWGTFTCRRHVAADDANWGVFETRMNELMPLGLRLIEEGFALYDPMPFDLSVDEFMAYASDKGMRRFGTIASARGRPLAEIDLDYTPVQLEDTFADEDARALAAV

Annotated regions:
Protein sequence:
MICVLIYDETYEGLSSFLIENNYKNYRVNQIWRWLYQNKVRNFNDMSNLPKDLILLLEEKYHFKALELVLKNQSADGTLKCLYALKDGHLIETVLMNHHYGLSVCVTTQVGCNIGCSFCASGIKKKERNLTAGELIAQVIETEKLYSERISHIVVMGIGEPFDNYKNLLQFLNVVNDQKGMAIGARHITVSTSGLVPKIIDFADLNTQVNLAISLHAPNNEVRTSLMKINMAYPIEKVIDAIKYYIDKTNRRVTIEYILINNVNDQVEHAIELAYLLKGLNVYVNLIPYNEVKEAPYVRSSKSNQLKFYDTLKKLKINTTLRKEQGHDINAACGQLRSSHEKEANL

Annotated regions:
phrase: LSVCVTTQVGCNIGCSFCASGIKKKERNLTAGELIAQVIETEKLYSERISHIVVMGIGEPFDNYKNLLQFLNVVNDQKGMAIGARHITVSTSGLVPKIIDFADLNTQVNLAISLHAPNNEVRTSLMKINMAYPIEKVIDAIKYYIDKTNRRVTIEYILINNVNDQVEHAIELAYLLKGLNVYVNLIPYNEVKEAPYVRSSKSNQLKFYDTLKKLKINT
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: TTQVGCNIGCSFCASGIKKKERNLTAGELIAQVIETEKLYSERISHIVVMGIGEPFDNYKNLLQFLNVVNDQKGMAIGARHITVSTSGLVPKIIDFADLNTQVNLAISLHAPNNEVRTSLMKINMAYPIEKVIDAIKYYIDKTNRRVTIEYILINNVNDQVEHAIE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: HHYGLSVCVTTQVGCNIGCSFCASGIKKKERNLTAGELIAQVIETEKLYSERISHIVVMGIGEPFDNYKNLLQFLNVVNDQKGMAIGARHITVSTSGLVPKIIDFADLNTQVNLAISLHAPNNEVRTSLMKINMAYPIEKVIDAIKYYIDKTNRRVTIEYILINNVNDQVEHAIELAYLLKGLNVYVNLIPYNEVKEAPYVRSSKSNQLKFYDTLKKLKINTTLRKEQGH
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: DETYEGLSSFLIENNYKNYRVNQIWRWLYQNKVRNFNDMSNLPKDLILLL
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: IYDETYEGLSSFLIENNYKNYRVNQIWRWLYQNKVRNFNDMSNLPKDLILLLEEKYHFKALELVLKNQSADGTLKCLYALKDGHLIETVLMNHHYGLSVCVTTQVGCNIGCSFCASGIKKKERNLTAGELIAQVIETEKLYSERISHIVVMGIGEPFDNYKNLLQFLNVVNDQKGMAIGARHITVSTSGLVPKIIDFADLNTQVNLAISLHAPNNEVRTSLMKINMAYPIEKVIDAIKYYIDKTNRRVTIEYILINNVNDQVEHAIELAYLLKGLNVYVNLIPYNEVKEAPYVRSSKSNQLKFYDTLKKLKINTTLRKEQGHDINAACGQLRSSHEKE
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MNIQDAQPSTLREMIKQGKLTGHTSGMAKGYVQANVVILPSKCAYDFLLFCFRNPKTCPLLDVSEKGNKSFTKYGVTADISTEVAAYRIYQYGELIETRANVDDLYTDDMVSFLIGCSFTFEHALLEAGIPIRHLEENHNVPMYVTNIPANPSGQFKGNITVSMRPMTMTQAIKATEITTRFKNVHGTPIHIGNPTEIGITDLALPDFGEPVTINENEVPVFWGCGVTPQSVALDAKPDLMITHAPGHMFITDIPDSQLSD

Annotated regions:
Protein sequence:
MHINTPVLLAIIYFLVFAPKSADAWWLLSKTDTSSANSGSSPILCKNVPGLTPQQKRMCHENPNIIKYLISGLRSALHTCEYTFQREAWNCTLTLPGVGTSPLQIASRESAYVYAISAAGVSHSLARACSKGLIDDCGCGETPQGSGSVAVSQASSRSSSDFVWAGCSDNVKFGNTFGRKFVDQYDRQHATEPRSQMNLHNNRVGRRLLVNAMNKECKCHGVSGSCVTKTCWKVMPKFDEFASRLHQKYQLAKLVTNNDQKLTVRSSPSAGSSGRSERFARNMDASSKQMRNELIYLDASPNYCAIDVKDRECGENCPNICCGRGWRTTREIVDEPCHCQFVWCCEVKCKTCKKLVERNYCL

Annotated regions:
phrase: CKCHGVSGS
type: CONSERVED_SITE
name: Wnt_CS
description: Wnt protein, conserved site
Protein sequence:
MYYGISQFSEAYNKILRNSSSHSSCQLVIFVSCLNIDALCATKMLSLLFKKQLVQSQIVPIFGYSELRRHYSQLDDNINSLLLVGFGGVIDLEAFLEIDPQEYVIDTDEKSGEQSFRRDIYVLDAHRPWNLDNIFGSQIIQCFDDGTVDDTLGEQKEAYYKLLELDEESGDDELSGDENDNNGGDDEATDADEVTDEDEEDEDETISNKRGNSSIGPNDLSKRKQRKKQIHEYEGVLEEYYSQGTTVVNSISAQIYSLLSAIGETNLSNLWLNILGTTSLDIAYAQVYNRLYPLLQDEVKRLTPSSRNSVKTPDTLTLNIQPDYYLFLLRHSSLYDSFYYSNYVNAKLSLWNENGKKRLHKMFARMGIPLSTAQETWLYMDHSIKRELGIIFDKNLDRYGLQDIIRDGFVRTLGYRGSISASEFVEALTALLEVGNSTDKDSVKINNDNNDDTDGEEEEDNSAQKLTNLRKRWVSNFWLSWDALDDRKVELLNRGIQLAQDLQRAIFNTGVAILEKKLIKHLRIYRLCVLQDGPDLDLYRNPLTLLRLGNWLIECCAESEDKQLLPMVLASIDENTDTYLVAGLTPRYPRGLDTIHTKKPILNNFSMAFQQITAETDAKVRIDNFESSIIEIRREDLSPFLEKLTLSGLL

Annotated regions:
Protein sequence:
MRVSQILNPTLREVPAEAEVVSHQLLVRAGLIRKSAAGIYTYLPLGLRVLRKIEQIVREEMDAKGGQEVLLPIIQPAELWRESGRWDLYGQELMRLNDRHNREFCLGPTHEEIITDLIRGEIRSYKQLPLLLYQIQNKYRDERRPRFGLMRGREFIMKDLYSFDRDEAGLAESYKKMYDAYTRIFTRCGLTFRPVEADAGAIGGTGGTHEFMVLAESGEAAVVYCPDCDYAANVEKAECKPAPVAGDAPVGAYRGVDTPGTKTIEQVAEFLKVSKSDLVKSLLYQGDDKLFLILVRGDREINEIKVNNALGPFINLQLAGPEVVLEKLGCEPGYVGPIGAPKNLTVVADLEVPLMAKAVCGANAEDKHYVDAVPEKDFRIDQILDLRMVNAGEPCPQCGSPLKEARGIEVGQVFKLGTKYSKALNAVFLDENGAEHPCVMGCYGIGVSRTMAAAIEQNNDKDGIIWPIPIAPYHVIVVPVNMKDDQVRETGEALYQELLKLGVEAVLDDRDERPGVKFKDADLVGYPLRVTVGSKTLANGEVELRDRKTGEVQLVKVEELAGRIQGMIREALGVK

Annotated regions:
phrase: GIYTYLPLGLRVLRKIEQIVREEMDAKGGQEVLLPIIQPAELWRESGRWDLYGQELMRLNDRHNREFCLGPTHEEIITDLIRGEIRSYKQLPLLLYQIQNKYRDERRPRFGLMRGREFIMKDLYSFDRDEAGLAESYKKMYDAYTRIFTRCGLTFRPVEADAGAIGGTGGTHEFMVLAESGEAAVVYCPDCDYAANVEKAECKPAPVAGDAPVGAYRGVDTPGTKTIEQVAEFLKVSKSDLVKSLLYQGDDKLFLILVRGDREINEIKVNNALGPFINLQLAGPEVVLEKLGCEPGYVGPIGAPKNLTVVADLEVPLMAKAVCGANAEDKHYVDAVPEKDFRIDQILDLRMVNAGEPCPQCGSPLKEARGIEVGQVFKLGTKYSKALNAVFLDENGAEHPCVMGCYGIGVSRTMAAAIEQNNDKDGIIW
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: LNDRHNREFCLGPTHEEIITDLIRGEIRSYKQLPLLLYQIQNKYRDERRPRFGLMRGREFIMKDLYSFDRDEAGLAESYKKMYDAYTRIFTRCGLTFRPVEADAGAIGGTGGTHEFMVLAESGEAAVVYCPDCDYAANVEKAECKPAPVAGDAPVGAYRGVDTPGTKTIEQVAEFLKVSKSDLVKSLLYQGDDKLFLILVRGDREINEIKVNNALGPFINLQLAGPEVVLEKLGCEPGYVGPIGAPKNLTVVADLEVPLMAKAVCGANAEDKHYVDAVPEKDFRIDQILDLRMVNAGEPCPQCGSPLKEARGIEVGQVFKLGTKYSKALNAVFLDENGAEHPCVMGCYGIGVSRTMAAAIEQ
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: EAEVVSHQLLVRAGLIRKSAAGIYTYLPLGLRVLRKIEQIVREEMDAKGGQEVLLPIIQPAELWRESGRWDLYGQELMRLNDRHNREFCLGPTHEEIITDLIRGEIRSYKQLPLLLYQIQNKYRDERRPRFGLMRGREFIMKDLYSFDRDEAGLAESYKKMYDAYTRIFTRCGLTFRPVEADAGAIGGTGGTHEFMVLAESGEAAVVYCPDCDYAANVEKAECKPAPVAGDAPVGAYRGVDTPGTKTIEQVAEFLKVSKSDLVKSLLYQGDDKLFLILVRGDREINEIKVNNALGPFINLQLAGPEVVLEKLGCEPGYVGPIGAPKNLTVVADLEVPLMAKAVCGANAEDKHYVDAVPEKDFRIDQILDLRMVNAGEPCPQCGSPLKEARGIEVGQVFKLGTKYSKALNAVFLDENGAEHPCVMGCYGIGVSRTMAAAIE
type: DOMAIN
name: ProRS_core_prok
description: Prokaryote proline-tRNA ligase core domain

phrase: HVIVVPVNMKDDQVRETGEALYQELLKLGVEAVLDDRDERPGVKFKDADLVGYPLRVTVGSKTLANGEVELRDRKTGEVQLVKVEELAGRI
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: TPGTKTIEQVAEFLKVSKSDLVKSLLYQGDDKLFLILVRGDREINEIKVNNALGPFINLQLAGPEVVLEKLGCEPGYVGPIGAPKNLTVVADLEVPLMAKAVCGANAEDKHY
type: DOMAIN
name: YbaK/aa-tRNA-synth-assoc-dom
description: YbaK/aminoacyl-tRNA synthetase-associated domain

phrase: PYHVIVVPVNMKDDQVRETGEALYQELLKLGVEAVLDDRDERPGVKFKDADLVGYPLRVTVGSKTLANGEVELRDRKTGEVQLVKVEELAGRI
type: DOMAIN
name: ProRS_anticodon_short
description: Proline--tRNA ligase, anticodon binding domain
Protein sequence:
MKTIIYTLILLSLNTHAVCTQEFQRAFFDTNSKRLSSVVDDLALKGVGKKIVVKGPFKLSGEIKINTAKNAYLPILTSVILSDKPVHLYDLPKISDVNKLKIILSELGVTITEKGNVTTFDSSTLKTNMAVCDMVTKMRASILFLGPLIARYGAGKVALPGGCPIGARPIDLHLEGLKALGVNFEEGDDFVQGIGKFNSLVGSDISLYFPSVGATENIMSAAILAKGETIIRNAAKEPEIDDLMDFLNAMGAKISWIGDGVMKIEGVSELKEVHYRAIGDRIEAGTYVLMGLMSRSHVKISGFNPEHLGDALNVLKMMGANMKVGPDYIEVFPSQLRPVDVTTLPHPGFPTDMQAQLMALLTTVEGQSKITETLFENRFMHAEYFNKLGADITVEGNKATINGKENFVPNKVVATDLRAAAALIMMASRIEGVTEIHDVKHLFRGYSDILEKLEEQGVDIKMINE

Annotated regions:
phrase: KGPFKLSGEIKINTAKNAYLPILTSVILSDKPVHLYDLPKISDVNKLKIILSELGVTITEKGNVTTFDSSTLKTNMAVCDMVTKMRASILFLGPLIARYGAGKVALPGGCPIGARPIDLHLEGLKALGVNFEEGDDFVQGIGKFNSLVGSDISLYFPSVGATENIMSAAILAKGETIIRNAAKEPEIDDLMDFLNAMGAKISWIGDGVMKIEGVSELKEVHYRAIGDRIEAGTYVLMGLMSRSHVKISGFNPEHLGDALNVLKMMGANMKVGPDYIEVFPSQLRPVDVTTLPHPGFPTDMQAQLMALLTTVEGQSKITETLFENRFMHAEYFNKLGADITVEGNKATINGKENFVPNKVVATDLRAAAALIMMASRIEGVTEIHDVKHLFRGYSDILEK
type: DOMAIN
name: Enolpyruvate_Tfrase_dom
description: Enolpyruvate transferase domain
Protein sequence:
MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKGRIAQEDCRNGFLLDGFPRTIPQADAMKEAGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEVRADLEKILG

Annotated regions:
phrase: FLLDGFPRTIP
type: CONSERVED_SITE
name: Adenylat_kinase_CS
description: Adenylate kinase, conserved site

phrase: RRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRK
type: DOMAIN
name: Adenylate_kinase_lid-dom
description: Adenylate kinase, active site lid domain
Protein sequence:
MRLIRNIYIFCSIVMTAEGDAPELPEERELMTNCSNMSLRKVPADLTPATTTLDLSYNLLFQLQSSDFHSVSKLRVLILCHNRIQQLDLKTFEFNKELRYLDLSNNRLKSVTWYLLAGLRYLDLSFNDFDTMPICEEAGNMSHLEILGLSGAKIQKSDFQKIAHLHLNTVFLGFRTLPHYEEGSLPILNTTKLHIVLPMDTNFWVLLRDGIKTSKILEMTNIDGKSQFVSYEMQRNLSLENAKTSVLLLNKVDLLWDDLFLILQFVWHTSVEHFQIRNVTFGGKAYLDHNSFDYSNTVMRTIKLEHVHFRVFYIQQDKIYLLLTKMDIENLTISNAQMPHMLFPNYPTKFQYLNFANNILTDELFKRTIQLPHLKTLILNGNKLETLSLVSCFANNTPLEHLDLSQNLLQHKNDENCSWPETVVNMNLSYNKLSDSVFRCLPKSIQILDLNNNQIQTVPKETIHLMALRELNIAFNFLTDLPGCSHFSRLSVLNIEMNFILSPSLDFVQSCQEVKTLNAGRNPFRCTCELKNFIQLETYSEVMMVGWSDSYTCEYPLNLRGTRLKDVHLHELSCNTALLIVTIVVIMLVLGLAVAFCCLHFDLPWYLRMLGQCTQTWHRVRKTTQEQLKRNVRFHAFISYSEHDSLWVKNELIPNLEKEDGSILICLYESYFDPGKSISENIVSFIEKSYKSIFVLSPNFVQNEWCHYEFYFAHHNLFHENSDHIILILLEPIPFYCIPTRYHKLKALLEKKAYLEWPKDRRKCGLFWANLRAAINVNVLATREMYELQTFTELNEESRGSTISLMRTDCL

Annotated regions:
phrase: LAGLRYLDLSFNDFDTMPICEEA
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LPKSIQILDLNNNQIQTVPKETIH
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: LPHLKTLILNGNKLETLSLVSCFA
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: VSKLRVLILCHNRIQQLDLKTFE
type: REPEAT
name: Leu-rich_rpt_typical-subtyp
description: Leucine-rich repeat, typical subtype

phrase: ELRYLDLSNNRLKSVTWYLLA
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: FISYSEHDSLWVKNELIPNLEKEDGSILICLYESYFDPGKSISENIVSFIEKSYKSIFVLSPNFVQNEWCHYEFYFAHHNLFHENSDHIILILLEPIPFYCIPTRYHKLKALLEKKAYLEWPKDRRKCGLFWANLRAA
type: DOMAIN
name: TIR_dom
description: Toll/interleukin-1 receptor homology (TIR) domain

phrase: RFHAFISYSEHDSLWVKNELIPNLEKEDGSILICLYESYFDPGKSISENIVSFIEKSYKSIFVLSPNFVQNEWCHYEFYFAHHNLFHENSDHIILILLEPIPFYCIPTRYHKLKALLEKKAYLEWPKDRRKCGLFWANLRAAINV
type: DOMAIN
name: TIR_dom
description: Toll/interleukin-1 receptor homology (TIR) domain

phrase: KLRVLILCHNRIQQLDLKTFEFNKELRYLDLSNNRLKSVTWYLLAGLRYLDLSFND
type: REPEAT
name: Leu-rich_rpt
description: Leucine-rich repeat

phrase: VRFHAFISYSEHDSLWVKNELIPNLEKEDGSILICLYESYFDPGKSISENIVSFIEKSYKSIFVLSPNFVQNEWCHYEFYFAHHNLFHENSDHIILILLEPIPFYCIPTRYHKLKALLEKKAYLEWPKDRRKCGLFWANLRAA
type: DOMAIN
name: TIR_dom
description: Toll/interleukin-1 receptor homology (TIR) domain

phrase: NPFRCTCELKNFIQLETYSEVMMVGWSDSYTCEYPLNLRGTRLKDVHLHELSC
type: DOMAIN
name: Cys-rich_flank_reg_C
description: Cysteine-rich flanking region, C-terminal