nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MARYTQRPENALKRANEFIEVGKPLRALDTLQEVFRNKRWNYAYSETVIEPLMFKYLYLCVELKKSHIAKEGLFQYRNMFQLVNVNSLENVIRGYLKMAEEHTEAAQAQSSAAVAVLELDDLDNIATPESILMSAVCGEDAQDRSDRTILLPWVKFLWESYCQCLELLRVNTHCEALYHDIARMAFQFCLKYNRKSEFRRLCDKLRKHLEDICKSSNQTTGVSINKVETQQLCLDTRLYLLDSAIQMELWQEAYKAIEDIHGLMALSKKTPVPKTMANYYQKLAMVFSKAGNQLFHAAALLKLFQLTRELKKNLTKDDLQRMAAHVLLATLSIPLPSAHPEFDRFIEADKSPLEKAQKLAVLLGLPQPPTRVSLIREVVRLNVPQLVSEDFRNLYNWLEVDFNPLNLCKRIQSIVDFIENGPENALLTPYIQSLKDVTIMRLIRQISQVYESIKFQRLLQLASFCNIFELEKLLVESVRHNDMQIRIDHQKNSIYFGTDLTESQREYRPDGPALQSMPSEQIRSQLVNMSTVLTRAVSIVYPNRERDQRAKLRNQMVNHYHEIKDREHQRILQRQKIIEDRKEYIEKQNNAREEEEARRQEEESRKAKLAEQKRLEQEQEERERKRHQNEIQAIREKSLKEKVQQISQTAHGKKMLSKLDEEGIKKLDAEQIAKRESEELQREAKELQSKLKSQEKKIDYFERAKRLEEIPLFEKYLAEKQVKDKEFWEATEKTRIENAIAERKDAVAQQERLKRMYPDRDEFLEALKKERASLYVEKLKKFEAALEAERKKRLADRIIRRREERRQAFLREKEEERLRKEEEIRLAQAAEERAAAEARRLEREAEDEKRRAQYEKQRAKEEEAERKIKEDRDRLSRELASERERTEKDRDTWRPRGGDRPSASNGGSSEWRRAAPAASERNDRGGERIERGGERIERGGERLERGGERIERGGDRDRKDNEGADSSWRVRREPDSQRAAAPKDSGAPQSRDDKWRRGGERDRDFRIDGARRDRDDGPRRDRDDGPRRDRDDERGGFRRADGARRTDEPQRETGGNWRDAPRHADRETRRPAERRDRDVRETRGDQRGSAPKEAASGGVGGNWRTAPATREEKPAAKRDQAQEKENKAGDDGEWTSVKRR

Annotated regions:
phrase: LQRMAAHVLLATLSIPLPSAHPEFDRFIEADKSPLEKAQKLAVLLGLPQPPTRVSLIREVVRLNVPQLVSEDFRNLYNWLEVDFNPLNLCKRIQSIVDFIENGPENALLTPYIQSLKDVTIMRLIRQISQVYESIKFQRLLQLASFCNIFELEKLLVESVRHNDMQIRIDHQKNSIYFGTDL
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain

phrase: LLTPYIQSLKDVTIMRLIRQISQVYESIKFQRLLQLASFCNIFELEKLLVESVRHNDMQIRIDHQKNSIY
type: DOMAIN
name: PCI_dom
description: Proteasome component (PCI) domain

phrase: ENALKRANEFIEVGKPLRALDTLQEVFRNKRWNYAYSETVIEPLMFKYLYLCVELKKSHIAKEGLFQYRNMFQLVNVNSLENVIRGYLKMAEEHTEAAQAQSSAAVAVLELDDLDNIATPESILMSAVCGEDAQDRSDRTILLPWVKFLWESYCQCLELLRVNTHCEALYHDIARMAFQFCLKYNRKSEFRRLCDKLRKHLEDICKSSNQTTGVSINKVETQQLCLDTRLYLLDSAIQMELWQEAYKAIEDIHGLMALSKKTPVPKTMANYYQKLAMVFSKAGNQLFHAAALLKLFQLTRELKKNLTKDDLQRMAAHVLLATLSIPLPSAHPEFDRFIEADKSPLEKAQKLAVLLGLPQPPTRVSLIREVVRLNVPQLVSEDFRNLYNWLEVDFNP
type: DOMAIN
name: eIF3a_PCI_TPR-like
description: eIF3a, PCI domain, TPR-like region
Protein sequence:
MPNSEQNAGVPRDAERPAVDPVFGTVEQALADIAAGKFIVVADDEDRENEGDLVCAAELVTPEMVNFMLEAKGMICLAMTNEWANRLGLEMQVEKNTESMGTAFTVSIDAAAKYGVTTGISAADRAATIRVAADPDSTRADLRVPGHIHPLRARDGGVLQRVGHTEAAVDLARLAGCRPAGVICEVLNKDGTTSRRPQLEQFCKQHGLTFITIAQLVAYRLKNERLVHRVAEARLPTEYGEWRIYGYKNDVDQREHIAIAYGDVSQGEGVLVRMHSKCLTGDVFHSRRCDCGWQLDTAMAMIQAEGRGVIVYLDQEGRGIGLINKLKAYELQDRGADTVEANEQLGFKADLRNYGIGAQILLDLSVRSIRVMTNNPRKLVGLDGYGLVLTDRVRIEAPSTDENASYLETKRTKLGHLFAI

Annotated regions:
phrase: RVAEARLPTEYGEWRIYGYKNDVDQREHIAIAYGDVSQGEGVLVRMHSKCLTGDVFHSRRCDCGWQLDTAMAMIQAEGRGVIVYLDQEGRGIGLINKLKAYELQDRGADTVEANEQLGFKADLRNYGIGAQILLDLSVRSIRVMTNNPRKLVGLDGYGLVLTDR
type: DOMAIN
name: GTP_cyclohydro_II
description: GTP cyclohydrolase II
Protein sequence:
MADRDSGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGGGAPGGLQHETQELASKRVDIQNKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAVEFRDYLGDFIEHYAQLGPSQPPDLAQAQDEPRRALKSEFLVRENRKYYMDLKENQRGRFLRIRQTVNRGPGLGSTQGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDNKRFFFDVGSNKYGVFMRVSEVKPTYRNSITVPYKVWAKFGHTFCKYSEEMKKIQEKQREKRAACEQLHQQQQQQQEETAAATLLLQGEEEGEED

Annotated regions:
Protein sequence:
MENRWQVMIVWQVDRMKIRTWNSLVKHHMHVSKKAKGWFYKHHYESAHPKVSSEVHIPLGDARLIVRTYWGLQTGERDWHLGHGVAIEWRQKRYSTQLDPDLADQLIHLHYFDCFSESAIRKAIIGEIVRPRCEFQAGHSKVGSLQYLALKALVAPTRKKPPLPSVAKLTEDRWNKPQKTRGRRGNHTLNGH

Annotated regions:
Protein sequence:
MAFSQAALSALPLSDRTFRKKPSSSSSSSPNFVLRVRAAAKEVHFNRDGSVTKKLQAGADMVAKLLGVTLGPKGRNVVLQNKYGPPRIVNDGETVLKEIELEDPLENVGVKLVRQAGAKTNDLAGDGSTTSIILAHGLITEGIKVISAGTNPIQVARGIEKTTKALVLELKSMSREIEDHELAHVAAVSAGNDYEVGNMISNAFQQVGRTGVVTIEKGKYLVNNLEIVEGMQFNRGYLSPYFVTDRRKREAEFHDCKLLLVDKKITNPKDMFKILDSAVKEEFPVLIVAEDIEQDALAPVIRNKLKGNLKVAAIKAPAFGERKSHCLDDLAIFTGATVIRDEMGLSLEKAGKEVLGTAKRVLVTKDSTLIVTNGFTQKAVDERVSQIKNLIENTEENFQKKILNERVARLSGGIAIIQVGALTQVELKDKQLKVEDALNATKSAIEEGIVVGGGCALLRLATKVDRIKETLDNTEQKIGAEIFKKALSYPIRLIAKNADTNGNIVIEKVLSNKNTMYGYNAAKNQYEDLMLAGIIDPTKVVRCCLEHASSVAQTFLTSDCVVVEIKEIKPRPIINPPLPTSSPATSSMFPDRKLPRFPQIMPRTRSHFPRK

Annotated regions:
Protein sequence:
MQSPASRCGRALVALLLACGFLGVWGEKRGFPPAQATLSLLGTKEVMTPPTKTSWTRGSNSSLMRSSAPAEVTKGGRGAGVPPRSFPPPCQRNIEISKTFKYINTIVSCLVFVLGIIGNSTLLRIIYKNKCMRNGPNILIASLALGDLLHIIIDIPINTYKLLAEDWPFGAEMCKLVPFIQKASVGITVLSLCALSIDRYRAVASWSRIKGIGVPKWTAVEIVLIWVVSVVLAVPEAIGFDMITSDYKGKPLRVCMLNPFQKTAFMQFYKTAKDWWLFSFYFCLPLAITAVFYTLMTCEMLRKKSGMQIALNDHLKQRREVAKTVFCLVLVFALCWLPLHLSRILKLTLYDQSNPHRCELLSFLLVLDYIGINMASLNSCINPIALYLVSKRFKNCFKSCLCCWCQTFEEKQSLEEKQSCLKFKANDHGYDNFRSSNKYSSS

Annotated regions:
phrase: GNSTLLRIIYKNKCMRNGPNILIASLALGDLLHIIIDIPINTYKLLAEDWPFGAEMCKLVPFIQKASVGITVLSLCALSIDRYRAVASWSRIKGIGVPKWTAVEIVLIWVVSVVLAVPEAIGFDMITSDYKGKPLRVCMLNPFQKTAFMQFYKTAKDWWLFSFYFCLPLAITAVFYTLMTCEMLRKKSGMQIALNDHLKQRREVAKTVFCLVLVFALCWLPLHLSRILKLTLYDQSNPHRCELLSFLLVLDYIGINMASLNSCINPIA
type: DOMAIN
name: GPCR_Rhodpsn_7TM
description: GPCR, rhodopsin-like, 7TM
Protein sequence:
MALSSTSTTNSLLPNRSLVQNQPLLPSPLKNAFFSNNSTKTVRFVQPISAVHSSDSNKIPIVSDKPSKSSPPAATATTAPAPAVTKTEWAVDSWKSKKALQLPEYPNQEELRSVLKTIDEFPPIVFAGEARSLEERLGEAAMGRAFLLQGGDCAESFKEFNANNIRDTFRILLQMGAVLMFGGQMPVIKVGRMAGQFAKPRSDSFEEKDGVKLPSYRGDNVNGDAFDVKSRTPDPQRLIRAYCQSAATLNLLRAFATGGYAAMQRINQWNLDFTEHSEQGDRYRELASRVDEALGFMTAAGLTMDHPIMKTTEFWTSHECLLLPYEQSLTRRDSTSGLYYDCSAHFLWVGERTRQLDGAHVEFLRGIANPLGIKVSDKMDPSALVKLIEILNPQNKAGRITIITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHDQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELSFIIAERLRKRRLGSQSV

Annotated regions:
Protein sequence:
MAVLALCLLWTLASAVRPAPVAPLGGPEPAQYEELTLLFHGALQLGQALNGVYRATEARLTEAGHSLGLYDRALEFLGTEVRQGQDATQELRTSLSEIQVEEDALHLRAEATARSLGEVARAQQALRDTVRRLQVQLRGAWLGQAHQEFETLKARADKQSHLLWALTGHVQRQQREMAEQQQWLRQIQQRLHTAALPA

Annotated regions:
Protein sequence:
MRKFTGQTLLVATHNAGKLEEIATLLEPYGVSVVGAAEKNLPEPDETETSFAGNARIKAHAAAKATGLPALSDDSGIEIDALNGAPGVYTADWAETGSGRDFIMAMTKAHDQITASEAPKPWTARFCCTLALAWPDGHDEVFPGTVEGQIVWPMRGSQGHGYDPIFQPKGYEITFGEMDRWAKNEISHRADAFAKLVKGCFD

Annotated regions:
Protein sequence:
MKDLVDTTEMYLRTIYELEEEGIVPLRARIAERLEQSGPTVSQTVARMERDGLVHVSPDRSLEMTPEGRSLAIAVMRKHRLAERLLTDIIGLDIHKVHDEACRWEHVMSDEVERRLVEVLDDVHRSPFGNPIPGLGEIGLDQADEPDSGVRAIDLPLGENLKARIVQLNEILQVDLEQFQALTDAGVEIGTEVDIINEQGRVVITHNGSSVELIDDLAHAVRVEKVEG

Annotated regions:
phrase: VRAIDLPLGENLKARIVQLNEILQVDLEQFQALTDAGVEIGTEVDIINEQGRVVITHNGSSVELIDDLAHAVRVE
type: DOMAIN
name: Fe-transptr_FeoA-like
description: Ferrous iron transporter FeoA-like domain

phrase: DSGVRAIDLPLGENLKARIVQLNEILQVDLEQFQALTDAGVEIGTEVDIINEQGRVVITHNGSSVELIDDLAHAVRVE
type: DOMAIN
name: DtxR/IdeR_SH3
description: Diphteria toxin repressor/Iron-dependent repressor IdeR, SH3 domain

phrase: TPEGRSLAIAVMRKHRLAERLLTDIIGLDIHKVHDEACRWEHVMSDEVERRLVEVLDDVHRSPFGNPI
type: DOMAIN
name: Fe_dep_repressor
description: Iron dependent repressor, metal binding and dimerisation domain

phrase: DLVDTTEMYLRTIYELEEEGIVPLRARIAERLEQSGPTVSQTVARMERDGLVHVSPDR
type: DOMAIN
name: HTH_DTXR
description: DTXR-type HTH domain

phrase: LVDTTEMYLRTIYELEEEGIVPLRARIAERLEQSGPTVSQTVARMERDGLVHVSPDRSLEM
type: DOMAIN
name: HTH_DTXR
description: DTXR-type HTH domain
Protein sequence:
MTWPEKTLPTTDASEKRSLGAGVFRRCDGCSHTHDAAELARTFEVCSQCGHHHKLDADGWRRLLLDDGELAAWDEHLVPNDPLRFSDGKSYRDRVAALHKKGRAKEAIEIGRGRLGGRDIAYGAFVFAFMGGSMGSVVGEKITRLFERATREELPVVLLQASGGARMQEGILSLMQMAKSVSALERYRKARLPFLSVLLHPTTGGVAASFAFLGDANIAEPKALIGFAGPRVIENTIRQTLPAGFQRSEFLLDHGMVDAIVPRPEMKAYIGTLLQHLTAGRRARR

Annotated regions:
phrase: AALHKKGRAKEAIEIGRGRLGGRDIAYGAFVFAFMGGSMGSVVGEKITRLFERATREELPVVLLQASGGARMQEGILSLMQMAKSVSALERYRKARLPFLSVLLHPTTGGVAASFAFLGDANIAEPKALIGFAGPRVIEN
type: DOMAIN
name: AcCoA_carboxyl_beta
description: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta

phrase: VFRRCDGCSHTHDAAELARTFEVCSQCGHHHKLDADGWRRLLLDDGELAAWDEHLVPNDPLRFSDGKSYRDRVAALHKKGRAKEAIEIGRGRLGGRDIAYGAFVFAFMGGSMGSVVGEKITRLFERATREELPVVLLQASGGARMQEGILSLMQMAKSVSALERYRKARLPFLSVLLHPTTGGVAASFAFLGDANIAEPKALIGFAGPRVIENTIRQTLPAGFQRSEFLLDHGMVDAIVPRPEMKAYIGTLLQHLTAGRRAR
type: DOMAIN
name: COA_CT_N
description: Acetyl-coenzyme A carboxyltransferase, N-terminal
Protein sequence:
MSVATPRAFVVGHPIAHSRSPLIHGHWLAVHGIPGSYERLDVPPAAFPDFVRGLPDSGFRGGNVTIPHKEAAFALADTLTPRARAIGAVNTLVVGPDGRIRGDNTDAPGFCAHLDHSLGAAWPERAGGTALVLGAGGAARAVVVGLAERGLRRVWVANRTAARAEAVAALAPGVGAALAWDDLPAALPGTGLLVNTTSLGMKGQPPLAVDLSPLPADAAVADIVYAPLETALLAAARRRGLAAVDGLGMLLHQAVPGFEAWFGPRPRVTPELRDRIVADLAG

Annotated regions:
phrase: VVGHPIAHSRSPLIHGHWLAVHGIPGSYERLDVPPAAFPDFVRGLPDSGFRGGNVTIPHKEAAFALADTLTPRARAIGAVNT
type: DOMAIN
name: Shikimate_DH-bd_N
description: Shikimate dehydrogenase substrate binding, N-terminal

phrase: GTALVLGAGGAARAVVVGLAERGLRRVWVANRTAARAEAVAALAPGVGAALAWDDLPAALPGTGLLVNT
type: DOMAIN
name: Shikm_DH/Glu-tRNA_Rdtase
description: Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase
Protein sequence:
MKLSMPRFDQAPVLVVGDVMLDRYWHGGTSRISPEAPVPVVKVDQIEDRPGGAANVALNIAALGAPASLVGVTGDDEAAESLANSLKAAGVLARFQRIANQPTIVKLRVISRHQQLLRIDFEEAFNTDPLALSAEVYSLLDGIKVLVLSDYGKGALRNHQALIQAARKRGIPVLADPKGKDFTIYRGASLITPNLSEFEAIVGHCEDEAQLVTKGAQLMQELDLGALLVTRGEHGMTLLRPDQQALHLPARAREVFDVTGAGDTVISTLAAAIAAGEELPHAVALANLAAGIVVGKLGTAAISAPELRRAIQREEGSERGVLGLEQLLLAVDDARAHKEKIVFTNGCFDILHAGHVTYLEQARALGDRLIVAVNDDASVSRLKGPGRPINSVDRRMAVLAGLGAVDWVISFPEGTPENLLSHVKPDVLVKGGDYGVDQVVGADIVQAYGGDVRVLGLVENSSTTAIVEKIRGQG

Annotated regions:
phrase: VLVVGDVMLDRYWHGGTSRISPEAPVPVVKVDQIEDRPGGAANVALNIAALGAPASLVGVTGDDEAAESLANSLKAAGVLARFQRIANQPTIVKLRVISRHQQLLRIDFEEAFNTDPLALSAEVYSLLDGIKVLVLSDYGKGALRNHQALIQAARKRGIPVLADPKGKDFTIYRGASLITPNLSEFEAIVGHCEDEAQLVTKGAQLMQELDLGALLVTRGEHGMTLLRPDQQALHLPARAREVFDVTGAGDTVISTLAAAIAAGEELPHAVALANLAAGIVVGKLGTAAISAPELR
type: DOMAIN
name: RfaE_dom_I
description: RfaE bifunctional protein, domain I

phrase: VLVVGDVMLDRYWHGGTSRISPEAPVPVVKVDQIEDRPGGAANVALNIAALGAPASLVGVTGDDEAAESLANSLKAAGVLARFQRIANQPTIVKLRVISRHQQLLRIDFEEAFNTDPLALSAEVYSLLDGIKVLVLSDYGKGALRNHQALIQAARKRGIPVLADPKGKDFTIYRGASLITPNLSEFEAIVGHCEDEAQLVTKGAQLMQELDLGALLVTRGEHGMTLLRPDQQALHLPARAREVFDVTGAGDTVISTLAAAIAAGEELPHAVALANLAAGIVVGKLGTAAI
type: DOMAIN
name: PfkB_dom
description: Carbohydrate kinase PfkB

phrase: GGAANVALNIAALGAPASLVGVT
type: CONSERVED_SITE
name: Carboh/pur_kinase_PfkB_CS
description: Carbohydrate/purine kinase, PfkB, conserved site

phrase: IVFTNGCFDILHAGHVTYLEQARALGDRLIVAVNDDASVSRLKGPGRPINSVDRRMAVLAGLGAVD
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain

phrase: VDDARAHKEKIVFTNGCFDILHAGHVTYLEQARALGDRLIVAVNDDASVSRLKGPGRPINSVDRRMAVLAGLGAVDWVISFPEGTPENLLSHVKPDVLVKGGDYGVDQVVGADIVQAYGGDVRVLGLVENSSTTAIVEKI
type: DOMAIN
name: RfaE_dom_II
description: RfaE bifunctional protein, domain II

phrase: MPRFDQAPVLVVGDVMLDRYWHGGTSRISPEAPVPVVKVDQIEDRPGGAANVALNIAALGAPASLVGVTGDDEAAESLANSLKAAGVLARFQRIANQPTIVKLRVISRHQQLLRIDFEEAFNTDPLALSAEVYSLLDGIKVLVLSDYGKGALRNHQALIQAARKRGIPVLADPKGKDFTIYRGASLITPNLSEFEAIVGHCEDEAQLVTKGAQLMQELDLGALLVTRGEHGMTLLRPDQQALHLPARAREVFDVTGAGDTVISTLAAAIAAGEELPHAVALANLAAGIVVGKLGTAAISAPELRRAI
type: DOMAIN
name: RfaE_dom_I
description: RfaE bifunctional protein, domain I

phrase: FTNGCFDILHAGHVTYLEQARALGDRLIVAVNDDASVSRLKGPGRPINSVDRRMAVLAGLGAVDWVISFPEGTPENLLSHVKPDVLVKGGDYGV
type: DOMAIN
name: Cyt_trans-like
description: Cytidyltransferase-like domain
Protein sequence:
MTRLLGGRIEVICGCMFSGKTEELIRRLNHVRLARQRLIAFTPRRDTRYRLGSLVSHNGLSVEARVIDSIRDIPAYLDSDVDVVAVDELHLLDDPPDAAREVCQQLADRGLRVIVAGLDQDFRAQPFPAMAQLMAVAEQVDKLYAICVRCGAYATRSQRLIDGKPAPADAPTIVVGGQELYEARCRACYEPAQ

Annotated regions:
phrase: GGQELYEARCRAC
type: CONSERVED_SITE
name: Thymidine_kinase_CS
description: Thymidine kinase, conserved site
Protein sequence:
MTPPRKLHIKSYGCQMNVYDAQRMVDTLAAEGFVETASAEEADLVILNTCHIREKASEKVYSELGRLRAAKDQAARDGREMSVVVAGCVAQAEGDEIIRRAPVVDVVVGPQSYHHLPQLLARAKADGRALETEFPVEDKFGFLPQPSRQAIRARGISAFVTVQEGCDKFCTFCVVPYTRGAEVSRPVAKIVEDVQRLADNGVREITLIGQNVNAYHGDGPDGRPWPFGKLLHRLADIPGIVRLRYSTSHPRDVEDSLIEAHRDLGALMPFVHLPVQSGSDRILEAMNRRHTADDYRRVVDRFRHVRQDIAFSSDFIVGFPGETEQDFTATLALVTQIGYAGAYSFKYSPRPGTPAAEMKETVSTADMDERLVRLQNLIDSQQSAFNRAAVGTTVDVLFERAARNPGQIVGRTAYLQPAHVVASADIIGQILPVTVASLERYSLLGSLASAPASRASADDAPPVGASSPAIMGV

Annotated regions:
phrase: VTVQEGCDKFCTFCVVPYTR
type: CONSERVED_SITE
name: Methylthiotransferase_CS
description: Methylthiotransferase, conserved site

phrase: RKLHIKSYGCQMNVYDAQRMVDTLAAEGFVETASAEEADLVILNTCHIREKASEKVYSELGRLRAAKDQAARDGREMSVVVAGCVAQAEGDEIIRRAPVVDVVVGPQSYHHLPQLLARAK
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: TVQEGCDKFCTFCVVPYTRGAEVSRPVAKIVEDVQRLADNGVREITLIGQNVNAYHGDGPDGRPWPFGKLLHRLADIPGIVRLRYSTSHPRDVEDSLIEAHRDLGALMPFVHLPVQSGSDRILEAMNRRHTADDYRRVVDRFRHVRQDIAFSSDFIVGFPGETEQDFTATLA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: PRKLHIKSYGCQMNVYDAQRMVDTLAAEGFVETASAEEADLVILNTCHIREKASEKVYSELGRLRAAKDQAARDGREMSVVVAGCVAQAEGDEIIRRAPVVDVVVGPQSYHHLPQLLARAKADGRALETEFPVEDKFGFLPQPSRQAIRARGISAFVTVQEGCDKFCTFCVVPYTRGAEVSRPVAKIVEDVQRLADNGVREITLIGQNVNAYHGDGPDGRPWPFGKLLHRLADIPGIVRLRYSTSHPRDVEDSLIEAHRDLGALMPFVHLPVQSGSDRILEAMNRRHTADDYRRVVDRFRHVRQDIAFSSDFIVGFPGETEQDFTATLALVTQIGYAGAYSFKYSPRPGTPAAEMKETVSTADMDERLVRLQNLIDSQQSAFNRAAVGTTVDVLFERAARNPGQIVGRTAYLQPAHVVASADIIGQILPVTVASLERYSLLGSLA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: KLHIKSYGCQMNVYDAQRMVDTLAAEGFVETASAEEADLVILNTCHIREKASEKVYSELGRLRAAKDQAARDGREMSVVVAGCVAQAEGDEIIRRAPVVDVVV
type: DOMAIN
name: Methylthiotransferase_N
description: Methylthiotransferase, N-terminal

phrase: RARGISAFVTVQEGCDKFCTFCVVPYTRGAEVSRPVAKIVEDVQRLADNGVREITLIGQNVNAYHGDGPDGRPWPFGKLLHRLADIPGIVRLRYSTSHPRDVEDSLIEAHRDLGALMPFVHLPVQSGSDRILEAMNRRHTADDYRRVVDRFRHVRQDIAFSSDFIVGFPGETEQDFTATLALVTQIGYAGAYSFKYSPRPGTPAAEMKETVSTADMDERLVRLQNLIDSQQS
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: AVGTTVDVLFERAARNPGQIVGRTAYLQPAHVVASADIIGQILPVTVASLERYSLLGS
type: DOMAIN
name: TRAM_dom
description: TRAM domain

phrase: ISAFVTVQEGCDKFCTFCVVPYTRGAEVSRPVAKIVEDVQRLADNGVREITLIGQNVNAYHGDGPDGRPWPFGKLLHRLADIPGIVRLRYSTSHPRDVEDSLIEAHRDLGALMPFVHLPVQSGSDRILEAMNRRHTADDYRRVVDRFRHVRQDIAFSSDFIVGFPGETEQDFTATLALVTQIGYAGAYSFKYSPRPGTPAAEMKETVSTADMDERLVRLQ
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: RAAVGTTVDVLFERAARNPGQIVGRTAYLQPAHVVASADIIGQILPVTVASLERYSLLGSLA
type: DOMAIN
name: TRAM_dom
description: TRAM domain
Protein sequence:
MTDTQSPFSFAAALLQCGSPGQTFSMESLLKPELGEYSPSGENGIDGEESTICSVCCDEASGRHYGVVACFGCKGFFRRTVRAGKNYVCRYSKKCRIDKAGRNVCRSCRFQKCLEVGMEPDAIRPDRDKTGRQKNPRRNTEGSIKKVSVGSILGDLPCLNKFKDDSDDAATSPSSRADSAPMDLRPSFIDESVLTTLTEIENIVIQLQDNFETNQQSLPPMGEAITKPSLIAARTLLNFNGAKGVADANCVSSNLRRMIVFTFDYINTLRPIADLHPSEKLVIARSIISPFCILFCGYQSVAIEAPEHDSIYLPSGHKLPASQLLFTKDSDQKKYILLENKADNVRRNMTEMIIQQLRRLNVTKTEMVALKAIMALDHNVKGLSAESCELLVVARESVQNALFSHLIATFGTAEATSRFAHLLLLIASATRVAYSLSSFFQLSRDVNYEIDYVLEELLFLDRI

Annotated regions:
phrase: CSVCCDEASGRHYGVVACFGCKGFFRRTVRAGKNYVCRYSKKCRIDKAGRNVCRSCRFQKCLEVGMEPDAIRPDR
type: DOMAIN
name: HNF4-like_DBD
description: Hepatocyte nuclear factor 4-like, DNA-binding domain

phrase: EIENIVIQLQDNFETNQQSLPPMGEAITKPSLIAARTLLNFNGAKGVADANCVSSNLRRMIVFTFDYINTLRPIADLHPSEKLVIARSIISPFCILFCGYQSVAIEAPEHDSIYLPSGHKLPASQLLFTKDSDQKKYILLENKADNVRRNMTEMIIQQLRRLNVTKTEMVALKAIMALDHNVKGLSAESCELLVVARESVQNALFSHLIATFGTAEATSRFAHLLLLIASATRVAYSLSSFFQLSRDVNYEIDYVLEELLFLD
type: DOMAIN
name: Nucl_hrmn_rcpt_lig-bd
description: Nuclear hormone receptor, ligand-binding domain

phrase: KDSDQKKYILLENKADNVRRNMTEMIIQQLRRLNVTKTEMVALKAIMALDHNVKGLSAESCELLVVARESVQNALFSHLIATFGTAEATSRFAHLLLLIASATRV
type: DOMAIN
name: Nucl_hrmn_rcpt_lig-bd
description: Nuclear hormone receptor, ligand-binding domain

phrase: CSVCCDEASGRHYGVV
type: DOMAIN
name: Znf_hrmn_rcpt
description: Zinc finger, nuclear hormone receptor-type

phrase: ACFGCKGFFRRTVRA
type: DOMAIN
name: Znf_hrmn_rcpt
description: Zinc finger, nuclear hormone receptor-type

phrase: RNVCRSCR
type: DOMAIN
name: Znf_hrmn_rcpt
description: Zinc finger, nuclear hormone receptor-type

phrase: FQKCLEVG
type: DOMAIN
name: Znf_hrmn_rcpt
description: Zinc finger, nuclear hormone receptor-type

phrase: SNLRRMIVFTFDYINTLRPIADLHPSEKLVIARSIISPFCILFCGYQSVAIEAPEHDSIYLPSGHKLPASQLLFTKDSDQKKYILLENKADNVRRNMTEMIIQQLRRLNVTKTEMVALKAIMALDHNVKGLSAESCELLVVARESVQNALFSHLIATFGTAEATSRFAHLLLLIASATRV
type: DOMAIN
name: Nucl_hrmn_rcpt_lig-bd
description: Nuclear hormone receptor, ligand-binding domain

phrase: CSVCCDEASGRHYGVVACFGCKGFFR
type: DOMAIN
name: Znf_hrmn_rcpt
description: Zinc finger, nuclear hormone receptor-type

phrase: STICSVCCDEASGRHYGVVACFGCKGFFRRTVRAGKNYVCRYSKKCRIDKAGRNVCRSCRFQKCLEVGMEP
type: DOMAIN
name: Znf_hrmn_rcpt
description: Zinc finger, nuclear hormone receptor-type

phrase: STICSVCCDEASGRHYGVVACFGCKGFFRRTVRAGKNYVCRYSKKCRIDKAGRNVCRSCRFQKCLEVGMEPDAIR
type: DOMAIN
name: Znf_hrmn_rcpt
description: Zinc finger, nuclear hormone receptor-type

phrase: ICSVCCDEASGRHYGVVACFGCKGFFRRTVRAGKNYVCRYSKKCRIDKAGRNVCRSCRFQKCLEVGM
type: DOMAIN
name: Znf_hrmn_rcpt
description: Zinc finger, nuclear hormone receptor-type
Protein sequence:
MTIERTFSIVKPNAVAKNAIGAIYARFESAGFTIVASKMLRLSREQAEGFYAEHKGKPFFDGLVEFMMSGPIMVQALEGENAVQRNRDIMGATNPANALAGTLRADYADSFTANAVHGSDSIESAQREIAYFFSDDEICPRA

Annotated regions:
phrase: ERTFSIVKPNAVAKNAIGAIYARFESAGFTIVASKMLRLSREQAEGFYAEHKGKPFFDGLVEFMMSGPIMVQALEGENAVQRNRDIMGATNPANALAGTLRADYADSFTANAVHGSDSIESAQREIAYFFSDDE
type: DOMAIN
name: NDK-like_dom
description: Nucleoside diphosphate kinase-like domain

phrase: NAVHGSDS
type: ACTIVE_SITE
name: Nucleoside_diP_kinase_AS
description: Nucleoside diphosphate kinase, active site

phrase: IERTFSIVKPNAVAKNAIGAIYARFESAGFTIVASKMLRLSREQAEGFYAEHKGKPFFDGLVEFMMSGPIMVQALEGENAVQRNRDIMGATNPANALAGTLRADYADSFTANAVHGSDSIESAQREIAYFFSDDEIC
type: DOMAIN
name: NDK-like_dom
description: Nucleoside diphosphate kinase-like domain
Protein sequence:
MVVQLDQIHFFIFHEVLKIFKTMPQLFKTSKKIDELVINTIRFLSVDMVERAKSGHPGMPLGASHIVYLLYDRIMKYNPKNPNWFNRDRFILSAGHGSAMLYAAFYMFGFDLTLEDLKAFRQLNSKTPGHPEYGLTPGVEVTTGNLGQGFGNAVGMAMAEKFLSHYFNREGYPVIDHYTYVLVSDGDLMEGVSYEAASLAGHFKLNKLIAIWDNNHITIDGDTKLTWTEDVLKRFEALGWEVYHLEDGYNLDLLEETILKAKESDKPTFISVRTHIGYGTPLQDTPEVHGKPMGKEIVEETKKKFGWPLEEFYVPEEALNYTRRKVEEGKALEEEWNKLYAEYREKYPDLAQTLEKALNKEWSLDWLEKVEEFKEDMPTRKASGKVLNVMADYIPTMIGGSADLSESVNTVLKKYGDFEADTPTGRNVHYGVREHAMGTILNGMAYHGGILPYGGTFLIFSEYMRPAIRTAALANLQVIFVYSHDSIGLGEDGPTHQPVEQLWSLRSIPNLWVVRPADANEVKYAWEIALKRKNGPTAIILTRQKVKTIDRSKYASPEGVRKGAYVIADTEGKPDVVIIATGSEVQVALGAKEILEQKGIKTRVVNMACCELFEEQPEEYKREVLPPEVTKRVAVEAGRDTGWYKYVGSDGLVISLNEFGKSAPGSVLFEYYGFTPENVANKVIEKWFS

Annotated regions:
phrase: MPTRKASGKVLNVMADYIPTMIGGSADLSESVNTVLKKYGDFEADTPTGRNVHYGVREHAMGTILNGMAYHGGILPYGGTFLIFSEYMRPAIRTAALANLQVIFVYSHDSIGLGEDGPTHQPVEQLWSLRSIPNLWVVRPADANEVKYAWEIALKRKNGPTAIILTRQKVK
type: DOMAIN
name: Transketolase-like_Pyr-bd
description: Transketolase-like, pyrimidine-binding domain

phrase: GAYVIADTEGKPDVVIIATGSEVQVALGAKEILEQKGIKTRVVNMACCELFEEQPEEYKREVLPPEVTKRVAVEAGRDTGWYKYVGSDGLVISLNEFGKSAPGSVLFEYYGF
type: DOMAIN
name: Transketolase-like_C_2
description: Transketolase-like, C-terminal domain

phrase: DELVINTIRFLSVDMVERAKSGHPGMPLGASHIVYLLYDRIMKYNPKNPNWFNRDRFILSAGHGSAMLYAAFYMFGFDLTLEDLKAFRQLNSKTPGHPEYGLTPGVEVTTGNLGQGFGNAVGMAMAEKFLSHYFNREGYPVIDHYTYVLVSDGDLMEGVSYEAASLAGHFKLNKLIAIWDNNHITIDGDTKLTWTEDVLKRFEALGWEVYHLEDGYNLDLLEETILKAKESDKPTFISVRTHIGYGTPLQDTPEVHGKPMGKEIVEETKKKFGWPLEEFYVPEEALNYTRRKVEEGKALEEEWNKLYAEYREKYPDLAQTLEKALNK
type: DOMAIN
name: Transketolase_N
description: Transketolase, N-terminal

phrase: RFLSVDMVERAKSGHPGMPL
type: CONSERVED_SITE
name: Transketolase_CS
description: Transketolase conserved site

phrase: MPTRKASGKVLNVMADYIPTMIGGSADLSESVNTVLKKYGDFEADTPTGRNVHYGVREHAMGTILNGMAYHGGILPYGGTFLIFSEYMRPAIRTAALANLQVIFVYSHDSIGLGEDGPTHQPVEQLWSLRSIPNLWVVRPADANEVKYAWEIALKRKNGPTAIILTRQK
type: DOMAIN
name: Transketolase-like_Pyr-bd
description: Transketolase-like, pyrimidine-binding domain

phrase: NTIRFLSVDMVERAKSGHPGMPLGASHIVYLLYDRIMKYNPKNPNWFNRDRFILSAGHGSAMLYAAFYMFGFDLTLEDLKAFRQLNSKTPGHPEYGLTPGVEVTTGNLGQGFGNAVGMAMAEKFLSHYFNREGYPVIDHYTYVLVSDGDLMEGVSYEAASLAGHFKLNKLIAIWDNNHITIDGDTKLTWTEDVLKRFEALGWEVYHLEDGYNLDLLEETILKAKESDKPTFISVRTHIGYGTPLQDTPEVHGKPMGKEIVEET
type: DOMAIN
name: Transketolase_N
description: Transketolase, N-terminal
Protein sequence:
MGGKWSKSCIVGWPQVRERMQRTPPAAEGAAEGVGAASQDLARRGAITSSNTAATNADCAWLEAQEEEEVGFPVRPQVPLRPMTYKAAVDLSHFLKEKGGLEGLIYSKRRQDILDLWVYHTQGYFPDWQNYTPGPGVRYPLTFGWCYKLVPVDPKEVEEATEGENNCLLHPISQHGIEDPEGEVLKWKFDSTLAFRHQAREKHPEFYKDC

Annotated regions:
Protein sequence:
MLIPFSMKNCFQLLCNLKVPAAGFKNTVKSGLILQSISNDVYHNLAVEDWIHDHMNLEGKPVLFLWRNSPTVVIGRHQNPWQECNLNLMREEGVKLARRRSGGGTVYHDMGNINLTFFTTKKKYDRMENLKLVVRALKAVHPHLDVQATKRFDLLLDGQFKISGTASKIGRNAAYHHCTLLCGTDGTFLSSLLKSPYQGIRSNATASTPALVKNLMEKDPTLTCEVVINAVATEYATSHQIDNHIHLINPTDETVFPGINSKAIELQTWEWIYGKTPKFSVDTSFTVLHEQSHVEIKVFIDVKNGRIEVCNIEAPDHWLPLEICDQLNSSLIGSKFSPIETTVLTSILHRTYPGDDELHSKWNILCEKIKGIM

Annotated regions:
phrase: DVYHNLAVEDWIHDHMNLEGKPVLFLWRNSPTVVIGRHQNPWQECNLNLMREEGVKLARRRSGGGTVYHDMGNINLTFFTTKKKYDRMENLKLVVRALKAVHPHLDVQATKRFDLLLDGQFKISGTASKIGRNAAYHHCTLLCGTDGTFLSSLLKSPYQGIRSNATASTPALVKNLMEKDPTLTCEVVINAVATE
type: DOMAIN
name: BPL_LPL_catalytic
description: Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain

phrase: LEGKPVLFLWRNSPTVVIGRHQNPWQECNLNLMREEGVKLARRRSGGGTVYHDMGNINLTFFTTKKKYDRMENLKLVVRALKAVHPHLDVQATKRFDLLLDGQFKISGTASKIGRNAAYHHCTLLCGTDGTFLSSLLKSPYQGIRSNATASTPALVKNLMEKDPTLTCEVVINAVATEYATSHQID
type: DOMAIN
name: BPL_LPL_catalytic
description: Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain
Protein sequence:
MRFSDSVVLIFGGTTGIGLMTTIDFIIHNTSHIILASRSKWKWKRAIEKIQNIFGDLVNLSNEFNISVLNSTVEYIPCDIRIENDVKQTIQKTIDKYHYINVYFNNAGIQPTTGHTDGDITEIEIPSEKLFDGTIVYKISQNNSNNDNLNNDNSNNDNSSVCSTPASSYCENPIATFIMGMTFCLKHEVKFALEQKSNIPVSIINMSSRNGVNIPSSDRPIYSACKAFIHSMTQTIATQSAKLGIEKNRSIRVNCIAPGPILTPLEIPIFLPDKKNVFEPLSNLELQQFQEIGSHGVPMKRTGTTNEISPTVLFLADYNQSSYITGSTITIDGGYTASPLIG

Annotated regions:
Protein sequence:
MKRMIALDGAQGEGGGQILRSALSLSMITGQPFTITSIRAGRAKPGLLRQHLTAVKAATEICGATVEGAELGSQRLLFRPGTVRGGDYRFAIGSAGSCTLVLQTVLPALWFADGPSRVEVSGGTDNPSAPPADFIRRVLEPLLAKIGIHQQTTLLRHGFYPAGGGVVATEVSPVASFNTLQLGERGNIVQMRGEVLLAGVPRHVAEREIATLAGSFSLHEQNIHNLPRDQGPGNTVSLEVESENITERFFVVGEKRVSAEVVAAQLVKEVKRYLASTAAVGEYLADQLVLPMALAGAGEFTVAHPSCHLLTNIAVVERFLPVRFSLIETDGVTRVSIE

Annotated regions:
phrase: HGFYPAGGGV
type: CONSERVED_SITE
name: RNA3'_term_phos_cycl-like_CS
description: RNA 3'-terminal phosphate cyclase-like, conserved site

phrase: ERGNIVQMRGEVLLAGVPRHVAEREIATLAGSFSLHEQNIHNLPRDQGPGNTVSLEVESENITERFFVVGEKRVSAEVVAAQLVKEVKRY
type: DOMAIN
name: RNA3'-term_phos_cycl_insert
description: RNA 3'-terminal phosphate cyclase, insert domain

phrase: GEGGGQILRSALSLSMITGQPFTITSIRAGRAKPGLLRQHLTAVKAATEICGATVEGAELGSQRLLFRPGTVRGGDYRFAIGSAGSCTLVLQTVLPALWFADGPSRVEVSGGTDNPSAPPADFIRRVLEPLLAKIGIHQQTTLLRHGFYPAGGGVVATEVSPVASFNTLQLGERGNIVQMRGEVLLAGVPRHVAEREIATLAGSFSLHEQNIHNLPRDQGPGNTVSLEVESENITERFFVVGEKRVSAEVVAAQLVKEVKRYLASTAAVGEYLADQLVLPMALAGAGEFTVAHPSCHLLTNIAVVERFLPVRF
type: DOMAIN
name: RNA3'_phos_cyclase_dom
description: RNA 3'-terminal phosphate cyclase domain