Protein sequence:
MSRQFPHSSAPLRSVKEVQFGLLSPEEVRAISVAKIEYPETMDQATKRPREGGLNDPRLGSIDRNFKCQTCGEDMAECPGHFGHIELAKPVFHIGFIAKIKKVCECVCMHCGKLLLDESNPAMAQAIRIRDPKKRFNAVWNLCKGKMICEADVLQDDGEGNEPKRTSRGGCGHTQPVVRKDGLKLWGTWKQNKNYDETEQPERRLLTPSEILNVFKHINSEDCVRLGFNEDYARPEWMLITVLPVPPPPVRPSIAFNDTARGEDDLTFKLADVIKANINVQRLELDGSPQHVISEFEALLQFHVATYMDNDIAGQPQALQKTGRPIKSIRARLKGKEGRLRGNLMGKRVDFSARTVISGDPNLDLDQVGVPISIARTLTYPEIVTPYNIHRLTEYVRNGPNEHPGAKYVIRDTGDRIDLRYNKRAGDIALQYGWKVERHLMDDDPVLFNRQPSLHKMSMMCHRVKVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSPETRAELSEICAVPLQIVSPQSNKPVMGIVQDTLCGVRKMTLRDIFIEYDQVMNMLYWIPDWDGVIPPMNLKDLNNVKQMVVSGSKGSFINISQMSACVGQQIVEGKRIPFGFADRSLPHFTKDDYSPESKGFVENSYLRGLTPQEFFFHAMAGREGLIDTAVKTAETGYIQRRLVKALEDIMVHYDGTTRNSLGDIIQFVYGEDGVDGTQVESQSVDVIPGTDESFERRYRVDLLDPEKCIRDSLLESGKEVRGDVNLQRVLDEEYEQLCNDRRYLREVCFTNGDYTWPLPVNLRRIIQNAQQLFHGGRHKASDLRLEEIVEGVKELCKKLLVLRGDSPLVKESQENATLLFQCLVRSRLATRRVIEEFRLNRMSFEWAMGEIETQFQKSLVHPGEMVGVIAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEILNVAKNIKTPALTVYLEKDIAADIEKAKVVQSAIEHTTLKNVTASTEIFYDPDPRSTVLEEDYDTVEAYFAIPDEKVEESIEKQSPWLLRLELDRAKMLDKQLTMAQVAEKISQNFGEDLFVIWSDDTADKLIIRCRVVRDPKSLDEDVDAEEDQILKRIEAHMLESISLRGIQGITRVFMMQHKLSLPDETGEFKQGQEWVLETDGVNLADVMAVPGVDAKRTYSNNFIEILSVLGIEATRSALFKEILNVIAFDGSYVNYRHMALLVDVMTARGHLMAITRHGINRADTGALMRCSFEETVEILLEAGAAAELDDCHGISENVVLGQLAPLGTGAFDVMVDDKILQSSPSNMSVPVGAAEGAGAYADDGGATPYREYDMEDDKIQFEEGAGFSPIHTAPVSDGAGALTAYGGQPGSPSPTSPFAYGATSPAYGGASPGYGVTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPAYSPTSPQYSPNSPQYSPRSPLYSPDQNDDKDKKQ

Annotated regions:
phrase: YSPTSP
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: YSPTSP
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: SPTSPSYSPTSPS
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: SPTSPSYSPTSPS
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: SPTSPSYSPTSPS
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: SPTSPSYSPTSPS
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: SPTSPFAYGATSPA
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: SPTSPSYSPTSPS
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: SPTSPAYSPTSPQ
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: SPNSPQYSPRS
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: SPTSPSYSPTSPS
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: ASPGYGVTSPT
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: SPTSPSYSPTSPS
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: SPTSPLYSPTSPS
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: SPTSPSYSPTSPQ
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: SPTSPSYSPTSPS
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: SPTSPSYSPTSPS
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: YSPTSP
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: YSPTSP
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: YSPTSP
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: GLTPQEFFFHAMAGREGLIDTAVKTAETGYIQRRLVKALEDIMVHYDGTTRNSLGDIIQFVYGEDGVDGTQVESQSVDVIPGTDESFERRYRVDLLDPEKCIRDSLLESGKEVRGDVNLQRVLDEEYEQLCNDRRYLREVCFTNGDYTWPLPVNLRRIIQNAQQLFHGGRHKASDLRLEEIVEGVKELCKKLLVLRGDSPLVKESQENATLLFQCLVRSRLATRRVIEEFRLNRMSFEWAMGEIETQFQKSLVHPGEMVGVIAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEILNVAKNIKTPALTVYLEKDIAADIEKAKVVQSAIEHTTLKNVTASTEIFYDPDPRSTVLEEDYDTVEAYFAIPDEKVEESIEKQSPWLLRLELDRAKMLDKQLTMAQVAEKISQNFGEDLFVIWSDDTADKLIIRCRVVRDPKSLDEDVDAEEDQILKRIEAHMLESISLRGIQGITRVFMMQHKLSLPDETGEFKQGQEWVLETDGVNLADVMAVPGVDAKRTYSNNFIEILSVLGIEATRSALFKEILNVIAFDGSYVNYRHMALLVDVMTARGHLMAITRHGINRADTG
type: DOMAIN
name: RNA_pol_Rpb1_5
description: RNA polymerase Rpb1, domain 5

phrase: YSPTSP
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: VDGTQVESQSVDVIPGTDESFERRYRVDLLDPEKCIRDSLLESGKEVRGDVNLQRVLDEEYEQLCNDRRYLREVCFTNGDYTWPLPVNLRRIIQNAQQLFHGGRHKASDLRLEEIVEGVKELCKKLLVLRGDSPLVKESQENATLLFQCLVRSRLATRRVIEEFRLNRMSFEWAMGEIETQFQK
type: DOMAIN
name: RNA_pol_Rpb1_6
description: RNA polymerase Rpb1, domain 6

phrase: EWMLITVLPVPPPPVRPSIAFNDTARGEDDLTFKLADVIKANINVQRLELDGSPQHVISEFEALLQFHVATYMDNDIAGQPQALQKTGRPIKSIRARLKGKEGRLRGNLMGKRVDFSARTVISGDPNLDLDQVGVPISIARTLTYPEIVTPYNIHRLTEYVRNGPNEHPGAKYVIRDTGDRIDLRYNKRAGDIALQYGWKVERHLMDDDPVLFNRQPSLHKMSMMCHRVKVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSPETRAELSEICAVPLQIVSPQSNKPVMGIVQDTLCGVRKM
type: DOMAIN
name: RNA_pol_N
description: RNA polymerase, N-terminal

phrase: YSPTSP
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: GKRVDFSARTVISGDPNLDLDQVGVPISIARTLTYPEIVTPYNIHRLTEYVRNGPNEHPGAKYVIRDTGDRIDLRYNKRAGDIALQYGWKVERHLMDDDPVLFNRQPSLHKMSMMCHRVKVMPYSTFRLNLSVTSPYNADFDGDEMNLHVPQSPETRAELSEICA
type: DOMAIN
name: RNA_pol_asu
description: RNA polymerase, alpha subunit

phrase: TTLKNVTASTEIFYDPDPRSTVLEEDYDTVEAYFAIPDEKVEESIEKQSPWLLRLELDRAKMLDKQLTMAQVAEKISQNFGEDLFVIWSDDTADKLIIRCRVVRDPKSLDEDVDAEEDQILKRIEAHMLESISL
type: DOMAIN
name: RNA_pol_Rpb1_7
description: RNA polymerase Rpb1, domain 7

phrase: YSPTSP
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: YSPTSP
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: YSPTSP
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: YSPTSP
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: YSPTSP
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: YSPTSP
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: YSPTSP
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: YSPTSP
type: REPEAT
name: RNA_pol_II_repeat_euk
description: RNA polymerase II, heptapeptide repeat, eukaryotic

phrase: RSVKEVQFGLLSPEEVRAISVAKIEYPETMDQATKRPREGGLNDPRLGSIDRNFKCQTCGEDMAECPGHFGHIELAKPVFHIGFIAKIKKVCECVCMHCGKLLLDESNPAMAQAIRIRDPKKRFNAVWNLCKGKMICEADVLQDDGEGNEPKRTSRGGCGHTQPVVRKDGLKLWGTWKQNKNYDETEQPERRLLTPSEILNVFKHINSEDCVRLGFNEDYARPEWMLITVLPVPPPPVRPSIAFNDTARGEDDLTFKLADVIKANINVQRLELDGSPQHVISEFEALLQFHVATYMDNDIAGQPQALQKTGRPIKSIRARLKGKEGRLRGN
type: DOMAIN
name: RNA_pol_Rpb1_1
description: RNA polymerase Rpb1, domain 1

phrase: QIVSPQSNKPVMGIVQDTLCGVRKMTLRDIFIEYDQVMNMLYWIPDWDGVIPPMNLKDLNNVK
type: DOMAIN
name: RNA_pol_Rpb1_3
description: RNA polymerase Rpb1, domain 3

phrase: NLKDLNNVKQMVVSGSKGSFINISQMSACVGQQIVEGKRIPFGFADRSLPHFTKDDYSPESKGF
type: DOMAIN
name: RNA_pol_Rpb1_4
description: RNA polymerase Rpb1, domain 4