Protein sequence:
MGARNSVLRGKKADELEKIRLRPSGKKKYRLKHIVWAANELDKFGLAESLLESKEGCQKILTVLDPLVPTGSENLKSLFNTVCVIWCLHAEEKVKDTEEAKKLVQRHLGAETGTAEKMPSTSRPTAPPSGRGRNFPVQQTGGGNYIHVPLSPRTLNAWVKLVEDKKFGAEVVPGFQALSEGCTPYDINQMLNCVGDHQAAMQIIREIINDEAADWDAQHPIPGPLPAGQLRDPRGSDIAGTTSTVEEQIQWMYRPQNPVPVGNIYRRWIQIGLQKCVRMYNPTNILDVKQGPKEPFQSYVDRFYKSLRAEQTDPAVKNWMTQTLLIQNANPDCKLVLKGLGMNPTLEEMLTACQGVGGPGQKARLMAEALKEALTPPPIPFAAAQQRKVIRCWNCGKEGHSARQCRAPRRQGCWKCGKTGHVMAKCPERQAGFLRDGSMGKEAPQLPRGPSSSGADTNSTPSRSSSGSIGKIYAAGERAEGAEGETIQRGDGRLTAPRAGKSTSQRGDRGLAAPQFSLWKRPVVTAYIEVQPVEVLLDTGADDSIVAGIQLGDNYVPKIVGGIGGFINTKEIKNIEIKVLNKRVRATIMTGDTPINIFGRNILTALGMSLNLPIAKIEPIKVTLKPGKDGPRLRQWPLTKEKIEALREICEKMEKEGQLEEAPPTNPYNTPTFAIKKKDKNKWRMLIDFRELNRVTQDFTEIQLGIPHPAGLAKKKRITVLDVGDAYFSIPLHEDFRQYTAFTLPSVNNAEPGKRYIYKVLPQGWKGSPAIFQHTMRQVLEPFRKANPDVILIQYMDDILIASDRTGLEHDKVVLQLKELLNGLGFSTPDEKFQKDPPLQWMGYELWPTKWKLQKLQLPQKEIWTVNDIQKLVGVLNWAAQIYPGIKTKHLCRLIKGKMTLTEEVQWTELAEAELEENKIILSQEQEGYYYQEEKELEATIQKNQDNQWTYKIHQEEKILKVGKYAKIKNTHTNGVRLLAQVVQKIGKEALVIWGRIPKFHLPVERETWEQWWDNYWQVTWIPEWDFVSTPPLVRLTFNLVGDPIPGAETFYTDGSCNRQSKEGKARYVTDRGRDKVRVLERTTNQQAELEAFAMTLTDSGPKVNIIVDSQYVMGIVVGQPTESESRIVNQIIEDMIKKEAVYVAWVPAHKGIGGNQEVDHLVSQGIRQVLFLERIEPAQEEHEKYHSNMKELTHKFGIPQLVARQIVNTCAQCQQKGEAIHGQVNAEIGVWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGSNFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPAERLINMITTEQEIQFLQRKNSNFKNFQVYYREGRDQLWKGPGELLWKGDGAVIVKVGADIKVIPRRKAKIIRDYGGRQELDSSHLEGAREEDGEVA

Annotated regions:
phrase: RNSVLRGKKADELEKI
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: RPSGKKKYRLKHIVWAAN
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: DKFGLAESLLESKEG
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: TGSENLKSLFNTVCVIWCL
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: HAEEKVKDTEEAK
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: EGQLEEAPPTNPYNTPTFAIKKKDKNKWRMLIDFRELNRVTQDFTEIQLGIPHPAGLAKKKRITVLDVGDAYFSIPLHEDFRQYTAFTLPSVNNAEPGKRYIYKVLPQGWKGSPAIFQHTMRQVLEPFRKANPDVILIQYMDDILIASDRTGLEHDKVVLQLKELLNGLGFSTPDEKFQKDPPLQWMGYE
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: GCWKCGKTGHVMAKCP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: RCWNCGKEGHSARQCR
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: VTAYIEVQPVEVLLDTGADDSIVAGIQLGDNYVPKIVGGIGGFINTKEIKNIEIKVLNKRVRATIMTGDTPINIFGRNIL
type: DOMAIN
name: Retropepsin-like_cat_dom
description: Retropepsin-like catalytic domain

phrase: LQKLQLPQKEIWTVNDIQKLVGVLNWAAQIYPGIKTKHLCRLIKGKMTLTEEVQWTELAEAEL
type: DOMAIN
name: RVT_thumb
description: Reverse transcriptase thumb

phrase: FQVYYREGRDQLWKGPGELLWKGDGAVIVKVGADIKVIPRRKAKIIR
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: RCWNCGKEGHSARQC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: WKRPVVTAYIEVQPVEVLLDTGADDSIVAGIQLGDNYVPKIVGGIGGFINTKEIKNIEIKVLNKRVRATIMTGDTPINIFGRNILTALGMS
type: DOMAIN
name: Retropepsins
description: Retropepsins

phrase: ERIEPAQEEHEKYHSNMKELTHKFGIPQLVARQIVNTCAQC
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: GARNSVLRGKKADELEKIRLRPSGKKKYRLKHIVWAANELDKFGLAESLLESKEGCQKILTVLDPLVPTGSENLKSLFNTVCVIWCLHAEEKVKDTEEAKKLVQRHLGAETGTAEKMPSTS
type: DOMAIN
name: Lentvrl_matrix_N
description: Immunodeficiency lentiviral matrix, N-terminal

phrase: AETFYTDGSCNRQSKEGKARYVTDRGRDKVRVLERTTNQQAELEAFAMTLTDSGPKVNIIVDSQYVMGIVVGQPTESESRIVNQIIEDMIKKEAVYVAWVPAHKGIGGNQEVDHLVSQG
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: QVNAEIGVWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGSNFTSQEVKMVAWWIGIEQSFGVPYNPQSQGVVEAMNHHLKNQISRIREQANTIETIVLMAVHCMNFKRRGGIGDMTPAERLINM
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: MYNPTNILDVKQGPKEPFQSYVDRFYKSLRAEQTDPAVKNWMTQTLLIQNANPDCKLVLKGLGMNPTLEEMLT
type: DOMAIN
name: Gag_p24_C
description: Retroviral nucleocapsid Gag protein p24, C-terminal domain

phrase: AQEEHEKYHSNMKELTHKFGIPQLVARQIVNTCAQCQ
type: DOMAIN
name: Integrase_Zn-bd_dom_N
description: Integrase, N-terminal zinc-binding domain

phrase: CWKCGKTGHVMAKCP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: IKKKDKNKWRMLIDFRELNRVTQDFTEIQLGIPHPAGLAKKKRITVLDVGDAYFSIPLHEDFRQYTAFTLPSVNNAEPGKRYIYKVLPQGWKGSPAIFQHTMRQVLEPFRKANPDVILIQYMDDILIASDRTGLEHDKVVLQLKELLNGLGFSTPDEKFQKDPPLQWMGY
type: DOMAIN
name: RT_dom
description: Reverse transcriptase domain

phrase: VEVLLDTGADDSIVAGIQLGDNYVPKIVGGIGGFINTKEIKNIEIKVLNKRVRATIMTGDTPINIFGRN
type: DOMAIN
name: Peptidase_A2_cat
description: Peptidase A2A, retrovirus, catalytic

phrase: IPGAETFYTDGSCNRQSKEGKARYVTDRGRDKVRVLERTTNQQAELEAFAMTLTDSGPKVNIIVDSQYVMGIVVGQPTESESRIVNQIIEDMIKKEAVYVAWVPAHKGIGGNQEVDHLVSQGI
type: DOMAIN
name: RNaseH_domain
description: Ribonuclease H domain

phrase: YYQEEKELEATIQKNQDNQWTYKIHQEEKILKVGKYAKIKNTHTNGVRLLAQVVQKIGKEALVIWGRIPKFHLPVERETWEQWWDNYWQVTWIPEWDFVS
type: DOMAIN
name: RVT_connect
description: Reverse transcriptase connection

phrase: GCWKCGKTGHVMAKCP
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: RCWNCGKEGHSARQC
type: DOMAIN
name: Znf_CCHC
description: Zinc finger, CCHC-type

phrase: AEIGVWQMDCTHLEGKIIIVAVHVASGFIEAEVIPQESGRQTALFLLKLASRWPITHLHTDNGSNFTSQEVKMVAWWIGIEQSFGVPYN
type: DOMAIN
name: Integrase_cat-core
description: Integrase, catalytic core

phrase: VYYREGRDQLWKGPGELLWKGDGAVIVKVGADIKVIPRRKAKI
type: DOMAIN
name: Integrase_C_retrovir
description: Integrase, C-terminal, retroviral

phrase: VLLDTGADDSI
type: ACTIVE_SITE
name: Aspartic_peptidase_AS
description: Aspartic peptidase, active site