nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MNSTAQRVEPGSELPPRPPAVDAEGRVLLKSMTLDELEVWVTKTLGEKRFRARQLWAWLHNRRVSDFEEMTDLSKAFRQRLSDGARIDALRLESVHEASDGTRKILWRTDADAVIESVWIPTPNRVTLCISSQVGCAINCQFCLTARMGLRAHLNTAEIVDQVVQVRRMYEEERRLTNVVFMGMGEPLHNPDNVIPATRILYDRQGLDLSARRITLSTSGLVPQIRRFGAESRARLAVSLNATTNEVRDWIMPINRRYPLEELMSALESFPLRKGERITFEYVLLKDVNDSLDDARRILRLTAHIPCKINLIPFNPHPGTEFVPSPPEQIEAFRALLSSRHASVTVRETRGDDRMAACGQLGSPGPRQPKRMDPPEAFRTHIRPSDAPRGPAGDAR

Annotated regions:
phrase: LKSMTLDELEVWVTKTLGEKRFRARQLWAWLHNRRVSDFEEMTDLSKAFRQRLSDGAR
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: TPNRVTLCISSQVGCAINCQFCLTARMGLRAHLNTAEIVDQVVQVRRMYEEERRLTNVVFMGMGEPLHNPDNVIPATRILYDRQGLDLSARRITLSTSGLVPQIRRFGAESRARLAVSLNATTNEVRDWIMPINRRYPLEELMSALESFPLRKGERITFEYVLLKDVNDSLDDARRILRLTAHIPCKINLIPFNPHPGTEFVPSPPEQIEAFRALLSSRHASVTVRETRGD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VLLKSMTLDELEVWVTKTLGEKRFRARQLWAWLHNRRVSDFEEMTDLSKAFRQRLSDGARIDALRLESVHEASDGTRKILWRTDADAVIESVWIPTPNRVTLCISSQVGCAINCQFCLTARMGLRAHLNTAEIVDQVVQVRRMYEEERRLTNVVFMGMGEPLHNPDNVIPATRILYDRQGLDLSARRITLSTSGLVPQIRRFGAESRARLAVSLNATTNEVRDWIMPINRRYPLEELMSALESFPLRKGERITFEYVLLKDVNDSLDDARRILRLTAHIPCKINLIPFNPHPGTEFVPSPPEQIEAFRALLSSRHASVTVRETRGDDRMAACGQLGSP
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SSQVGCAINCQFCLTARMGLRAHLNTAEIVDQVVQVRRMYEEERRLTNVVFMGMGEPLHNPDNVIPATRILYDRQGLDLSARRITLSTSGLVPQIRRFGAESRARLAVSLNATTNEVRDWIMPINRRYPLEELMSALESFPLRKGERITFEYVLLKDVND
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: VTLCISSQVGCAINCQFCLTARMGLRAHLNTAEIVDQVVQVRRMYEEERRLTNVVFMGMGEPLHNPDNVIPATRILYDRQGLDLSARRITLSTSGLVPQIRRFGAESRARLAVSLNATTNEVRDWIMPINRRYPLEELMSALESFPLRKGERITFEYVLLKDVNDSLDDARRILRLTAHIPCKINLIPFNPHPGTEFVPSPPEQIEAFRALL
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain
Protein sequence:
MLSNTLRSNFLKFYANRNHTPVASSPVFPHNDPSILFTNAGMNQFKNIFLGKEQTSYTRATTSQKCIRAGGKHNDLENVGHTSRHLTFFEMLGNFSFGDYFKQDAISFAWEVSLSVFNFDPDFIYATVHEKDDEAFALWEKYLPTDRIFRLTDKDNFWSMADTGPCGFCSELLFDRGEKFGKAASPLEDVDGERFLEYWNLVFMEFNRTSDGTLLALQKKCVDTGAGLERLVSLLAETKTVFEADVLRHLISKIENLSGTTYSPTEAKGAAFRVIADHIRSLSFAIADGLLPGNTERGYVLRKILRRAVNYGKRLGFNRPFLADVVPSLVDVMGEAYPELSASVTQIQEVLTTEEEHFFKTLQRGGNLLQQVLKSSASSAKISGEDAFKLKDTYGLPIDEIALLAKDYNYAIDMDTFEKLEVEAKERSRKNTKKTKNDSDSVFQDLDPTNTSEFIGYDTLSCDTFIEGIIKYNEIASSLEEGDEGAIILRTTPFYAEKGGQIGDSGEIFCESGTFLVSHTIAPKAGLIVHLGKLSQGSLTTTMAVTAQVNQNLRKKTANNHTGCHLLHKALEMTLGEHIRQAGSYVDSQKIRLDFTHNKALSPEDLLAIETLVNEKIRENDPVTIREVLYSDVMSSSEIKQFCGDKYGDIVRVVLAGFSHELCGGTHAQATGDIGYFRITKEHAVATGIRRIEATTGEDAENIARGQDVDLNEIATVIQSPKDQILVKIRSVMEEKKDLAKQVADLENQLVQQQVKTLLTSCEKICDTSYLVYYLTEEEGQRIQHYANAIHKEIPTNFISLWITEKNGRYIVLSRVSDDLTKRGVQAHTLLAELLAPYGGRCGGKAISAQGSSAELPQIEFLNKTLRQWISTQLA

Annotated regions:
phrase: VRVVLAGFSHELCGGTHAQATGDIGYFRITKEHAVATGIRRI
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD

phrase: MLSNTLRSNFLKFYANRNHTPVASSPVFPHNDPSILFTNAGMNQFKNIFLGKEQTSYTRATTSQKCIRAGGKHNDLENVGHTSRHLTFFEMLGNFSFGDYFKQDAISFAWEVSLSVFNFDPDFIYATVHEKDDEAFALWEKYLPTDRIFRLTDKDNFWSMADTGPCGFCSELLFDRGEKFGKAASPLEDVDGERFLEYWNLVFMEFNRTSDGTLLALQKKCVDTGAGLERLVSLLAETKTVFEADVLRHLISKIENLSGTTYSPTEAKGAAFRVIADHIRSLSFAIADGLLPGNTERGYVLRKILRRAVNYGKRLGFNRPFLADVVPSLVDVMGEAYPELSASVTQIQEVLTTEEEHFFKTLQRGGNLLQQVLKSSASSAKISGEDAFKLKDTYGLPIDEIALLAKDYNYAIDMDTFEKLEVEAKERSRKNTKKTKNDSDSVFQDLDPTNTSEFIGYDTLSCDTFIEGIIKYNEIASSLEEGDEGAIILRTTPFYAEKGGQIGDSGEIFCESGTFLVSHTIAPKAGLIVHLGKLSQGSLTTTMAVTAQVNQNLRKKTANNHTGCHLLHKALEMTLGEHIRQAGSYVDSQKIRLDFTHNKALSPEDLLAIETLVNEKIRENDPVTIREVLYSDVMSSSEIKQFCGDKYGDIVRVVLAGFSHELCGGTHAQATGDIGYFRITKEHAVATGIRRIEATTGEDAENIAR
type: DOMAIN
name: Ala-tRNA-synth_IIc_core
description: Alanyl-tRNA synthetase, class IIc, core domain

phrase: VRVVLAGFSHELCGGTHAQATGDIGYFRITKEHAVATGIRRI
type: DOMAIN
name: tRNA_SAD
description: Threonyl/alanyl tRNA synthetase, SAD

phrase: LRSNFLKFYANRNHTPVASSPVFPHNDPSILFTNAGMNQFKNIFLGKEQTSYTRATTSQKCIRAGGKHNDLENVGHTSRHLTFFEMLGNFSFGDYFKQDAISFAWEVSLSVFNFDPDFIYATVHEKDDEAFALWEKYLPTDRIFRLTDKDNFWSMADTGPCGFCSELLFDRGEKFGKAASPLEDVDGERFLEYWNLVFMEFNRTSDGTLLALQKKCVDTGAGLERLVSLLAETKTVFEADVLRHLISKIENLSGTTYSPTEAKGAAFRVIADHIRSLSFAIADGLLPGNTERGYVLRKILRRAVNYGKRLGFNRPFLADVVPSLVDVMGEAYPELSASVTQIQEVLTTEEEHFFKTLQRGGNLLQQVLKSSASSAKISGEDAFKLKDTYGLPIDEIALLAKDYNYAIDMDTFEKLEVEAKERSRKNTKKTKNDSDSVFQDLDPTNTSEFIGYDTLSCDTFIEGIIKYNEIASSLEEGDEGAIILRTTPFYAEKGGQIGDSGEIFCESGTFLVSHTIAPKAGLIVHLGKLSQGSLTTTMAVTAQVNQ
type: DOMAIN
name: Ala-tRNA-synth_IIc_N
description: Alanyl-tRNA synthetase, class IIc, N-terminal

phrase: DTSYLVYYLTEEEGQRIQHYANAIHKEIPTNFISLWITEKNGRYIVLSRVSDDLTKRGVQAHTLLAELLAPYGGRCGGKAISAQGSSAELPQIEFLNKTLRQWI
type: DOMAIN
name: DHHA1_dom
description: DHHA1 domain
Protein sequence:
MGKVIGIDLGTTFSCVAVMEGGQPVVIPNAEGARTTPSVVAFTKEGERLVGQVAKRQAIVNPDRTIMSIKRHMGSDYKVKIDDKEYTPQEISAMILQKLKADAEAYLGEKVTQAVITVPAYFNDSQRQATKDAGRIAGLEVLRIINEPTAAALAYGLDKEGNQKIMVYDLGGGTFDVSILEIGEGVFEVLATSGNNHLGGDDFDQRIIDWLADNFKKEHGIDLRNDRMALQRLKDAAERAKIELSSATVTNINLPFITADATGPKHIDVNLTRAKFEELISDLVESTVGPVNQALNDAGLKPSDIDKVLLIGGSTRVPLVQETVKKIMGKEPHKGINPDEAVAIGAAIQAAVLSGEVKDILLLDVTPLSLGIETLGGVFTKIIERNTTIPTRKSQIFTTAADNQTSVEIHVLQGERPMAKDNKTLGRFILSGIPPAPRGVPQIEVTFDIDANGIVHVSAKDLGTGKSQDITITSTTNLSEEEIQRMINEAKQYEEQDRKKKEEIEIRNKADSLIYQAEKTMKDLGDKMTQAEKDEINKEIENVRKALEGSDIEAIKSASEKLSQAFYKVSTRIYQQAGGQTGGATNTDSAGQGTTQDNVYEANYKVEDDDNK

Annotated regions:
phrase: IDLGTTF
type: CONSERVED_SITE
name: Heat_shock_70_CS
description: Heat shock protein 70, conserved site

phrase: VYDLGGGTFDVSI
type: CONSERVED_SITE
name: Heat_shock_70_CS
description: Heat shock protein 70, conserved site

phrase: VLLIGGSTRVPLVQ
type: CONSERVED_SITE
name: Heat_shock_70_CS
description: Heat shock protein 70, conserved site
Protein sequence:
MTQKNGPLRIGIGGPVGSGKTTLTEKLCKALRDKYSVAVITNDIYTQEDALILARSQALSEDRIMGVETGGCPHTAIREDASINLQAIAEMNRRFPDLEIVFIESGGDNLAATFSPDLADLTLYVISVCQGEEIPRKGGPGITRSDFLVINKSDLAPHVHVDLDIMQGDAARMRGKRPFGFTDLHRGKGVPEIIDFIVENGGLEAR

Annotated regions:
phrase: IGIGGPVGSGKTTLTEKLCKALRDKYSVAVITNDIYTQEDALILARSQALSEDRIMGVETGGCPHTAIREDASINLQAIAEMNRRFPDLEIVFIESGGDNLAATFSPDLADLTLYVISVCQGEEIPRKGGPGITRSDFLVINKSDLAPHVHVDLDIMQGDAARMRGKRP
type: DOMAIN
name: CobW/HypB/UreG_nucleotide-bd
description: CobW/HypB/UreG, nucleotide-binding domain
Protein sequence:
MSKGKLEQVSAACHHLGFFNNAGLSAHYKLSESSSPAVADLRGLVYAAAGDLLRKHRILFAIPVNEGTPNPHFACLPWIDLRRSIAFLERSVPLASAAEEQDKELDAILEEQHNIDFQTDYGTLPFWRLIILRSKGRNDFTASFIYHHAIGDGVSGLAFHKAFCNALEAASSSTLPTDRAENIIRPDENTVVLPPLEELHPMPISPRQPPLPTASPKEWTGASIHLPCKSRWASLYISPSASNAFVQECKEMKLSVTSALSSVVAAVLFDNLPSRVEALTCIIPVSVRPWLKLPPQVIDNAIGTYFDALRVRLTRAEQRSQDPSPVGIWCGARQVSRSINAYLCDVSPSGEPYTSVAAFKTVPDVSAVFRSTLGKPRDAAFEVTNVGLFPPAAIRRPSRWKAGNVLLSRSAAVPGAAVTVSVVTGRDGTMALGFSWQEGVVEDGFMHRVRQGVWKYFEKYQS

Annotated regions:
Protein sequence:
MPGRQRRDGGSGPAGQNGPNSGDNSNARGDNRGGGRDRRDGGRGGNAAEKSQFIERVVTINRVSKVVKGGRRFSFTALVIVGDGNGLVGVGYGKAKEVPAAIQKGVEEARKSFFRVPMIANTITHPVQGEAAAGIVMLRPASPGTGVIAGGAVRAVLECAGIADILSKSLGSDNAINVVHATVAALKGLQRPEEVAARRGLTLEEVAPAGMLRARAQAAGSVK

Annotated regions:
phrase: GRRFSFTALVIVGDGNGLVGVGYGKAKEVPAA
type: CONSERVED_SITE
name: Ribosomal_uS5_N_CS
description: Small ribosomal subunit protein uS5, N-terminal, conserved site

phrase: IERVVTINRVSKVVKGGRRFSFTALVIVGDGNGLVGVGYGKAKEVPAAIQKGVEEARKSFFRV
type: DOMAIN
name: Ribosomal_uS5_N
description: Small ribosomal subunit protein uS5, N-terminal

phrase: EAAAGIVMLRPASPGTGVIAGGAVRAVLECAGIADILSKSLGSDNAINVVHATVAALKGLQRPEEVAAR
type: DOMAIN
name: Ribosomal_uS5_C
description: Small ribosomal subunit protein uS5, C-terminal

phrase: FIERVVTINRVSKVVKGGRRFSFTALVIVGDGNGLVGVGYGKAKEVPAAIQKGVEEARKSFFR
type: DOMAIN
name: Ribosomal_uS5_N
description: Small ribosomal subunit protein uS5, N-terminal
Protein sequence:
MGRIVVLYVDGAFGIGKTTVLRQIQKSAAYRFRRIYLEEPMRAWRSWFVDDHDAIREIYTTQELKDAGEIDLREASRRVCYAQVSLSAPFHIMNAVIYGIISGESEATSAHLGEGDYFVGVDRHPLASCLCFPVARFVTGYLEYTDLIALVATLPDYPRGASIAILDLSVEEQARRITERSRSGEHVNKTFLRILRNVFIIMYNTVAYLRNVSIDKACADREALEDFRGSQLESDMHKIDIQPRDDPNASETLFAVMASDATWRKNRKQSALFVYTMAKLDALLRSLNMHIVDINGLSQEQCAEKVVAISSKVPAVTARGNAPDLLFDAVEAYNADMGV

Annotated regions:
Protein sequence:
MVDQVKVVADDQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGFMLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGMADVVAITAYAQFWFPDLSDWVASLAVIVLLLTLNLATVKMFGEMEFWFAMIKIVAIVSLIVVGLVMVAMHFQSPTGVEASFAHLWNDGGWFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSLPRAINSIPIRIIMFYVFALIVIMSVTPWSSVVPEKSPFVELFVLVGLPAAASVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKAFAKLSKRAVPAKGLTFSCICLLGGVVMLYVNPSVIGAFTMITTVSAILFMFVWTIILCSYLVYRKQRPHLHEKSIYKMPLGKLMCWVCMAFFVFVVVLLTLEDDTRQALLVTPLWFIALGLGWLFIGKKRAAELRK

Annotated regions:
phrase: HIQLIAIGGAIGTGLFMGSGKTISLAGPSIIFVYMIIGFMLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWAGYFTGWTYWFCWVVTGMADVVAITAYAQFWFPDLSDWVASLAVIVLLLTLNLATVKMFGEMEFWFAMIKIVAIVSLIVVGLVMVAMHFQSPTGVEASFAHLWNDGGWFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSLPRAINSIPIRIIMFYVFALIVIMSVTPWSSVVPEKSPFVELFVLVGLPAAASVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKAFAKLSKRAVPAKGLTFSCICLLGGVVMLYVNPSVIGAFTMITTVSAILFMFVWTIILCSYLVYRKQRPHLHEKSIYKMPLGKLMCWVCMAFFVFVVVLLTLEDDTRQALLVTPLWFIALGLGWLFIGKKRAAE
type: DOMAIN
name: AA-permease/SLC12A_dom
description: Amino acid permease/ SLC12A domain

phrase: AGPSIIFVYMIIGFMLFFVMRAMGELLLSN
type: CONSERVED_SITE
name: Amino_acid_permease_CS
description: Amino acid permease, conserved site
Protein sequence:
MSNKKADSKPQAKYPVNLLDTPFPMRGDLPKREPQWVKEWEARGIYEKIRAASQGRPKFILHDGPPYANGDIHLGHAVNKILKDIVVKSRNMAGFDAPYVPGWDCHGMPIEIQIEKQFGKSLPAAEVMSKARAYATEQIEKQKVGFKRLGVLGDWANPYKTMNFVNEAEEIRALGKIIEKGYVYRGLKPVNWCFDCGSALAEAEVEYKDRTDPTIDVMFAFAEPEKTAHAFGLPALPRAEGGIVIWTTTPWTIPANQALNLHPEIIYALVDTERGLLIIAEERVEACMTDFKLTGRVVATAPGVKLANLRFHHPLASAHPGYKRTAPVYLGDYVTTDTGTGVVHSSPAYGIEDFMSCKAHGMTDSDFINPVMGDGRYIESLPLFGGLSIWDANPKIVDALNAAGSLLRSEKYTHSYMHCWRHKTPIIYRATSQWFAGMDVTPQDGGKTLRETALEGVDATAFYPSWGKQRLFSMIANRPDWTLSRQRQWGVPMAFFVHKETGELHPRTLELLEEVAKRVEQSGIEAWQSLDPRELIGDDANLYEKNRDTLDVWFDSGTTHWHVLRGSHKDQLQFPADLYLEGSDQHRGWFHSSLLTASMIDGRAPYKGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELAISEEILKRVTEGYRRIRNTLRFLLANLSDFDFAQHAVPVDEWLEIDRYAVAFSQQLQTELLGHYEKYEFHPVVAKLQTYCSEDLGGFYLDVLKDRLYTSAADSRARRSAQTALYHLTHGLLRVLAPFLSFTAEEAWKVFQPASDTIFTETYYAYPEVAGSAALIEKWALLRDVRGSVTKALEEARTANRIGSSLQAEVAVHASGARYDALTSLGDDLKFVLITSAATVVKVDDEAQESVDVAASKYQKCERCWHYREDVGAHAEHPTLCGRCFSNLFENGEIRSAA

Annotated regions:
phrase: QKCERCWHYREDVGAHAEHPTLCGRCF
type: DOMAIN
name: Znf_FPG/IleRS
description: Zinc finger, FPG/IleRS-type

phrase: DRYAVAFSQQLQTELLGHYEKYEFHPVVAKLQTYCSEDLGGFYLDVLKDRLYTSAADSRARRSAQTALYHLTHGLLRVLAPFLSFTAEEAWKVFQPASDTIFTETYYAYPEVAGSAALIEKWALLRDVRGSVTKALEEARTANRIGSSLQAEV
type: DOMAIN
name: M/V/L/I-tRNA-synth_anticd-bd
description: Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding

phrase: QWVKEWEARGIYEKIRAASQGRPKFILHDGPPYANGDIHLGHAVNKILKDIVVKSRNMAGFDAPYVPGWDCHGMPIEIQIEKQFGKSLPAAEVMSKARAYATEQIEKQKVGFKRLGVLGDWANPYKTMNFVNEAEEIRALGKIIEKGYVYRGLKPVNWCFDCGSALAEAEVEYKDRTDPTIDVMFAFAEPEKTAHAFGLPALPRAEGGIVIWTTTPWTIPANQALNLHPEIIYALVDTERGLLIIAEERVEACMTDFKLTGRVVATAPGVKLANLRFHHPLASAHPGYKRTAPVYLGDYVTTDTGTGVVHSSPAYGIEDFMSCKAHGMTDSDFINPVMGDGRYIESLPLFGGLSIWDANPKIVDALNAAGSLLRSEKYTHSYMHCWRHKTPIIYRATSQWFAGMDVTPQDGGKTLRETALEGVDATAFYPSWGKQRLFSMIANRPDWTLSRQRQWGVPMAFFVHKETGELHPRTLELLEEVAKRVEQSGIEAWQSLDPRELIGDDANLYEKNRDTLDVWFDSGTTHWHVLRGSHKDQLQFPADLYLEGSDQHRGWFHSSLLTASMIDGRAPYKGLLTHGFTVDGEGRKMSKSLGNGIDPHEVANRLGAEIIRLWIASTDYSGELA
type: DOMAIN
name: aa-tRNA-synth_Ia
description: Aminoacyl-tRNA synthetase, class Ia

phrase: ISEEILKRVTEGYRRIRNTLRFLLANLSDFDFAQHAVPVDEWLEIDRYAVAFSQQLQTELLGHYEKYEFHPVVAKLQTYCSEDLGGFYLDVLKDRLYTSAADSRARRSAQTALYHLTHGLLRVLAPFLSFTAEEAWKVFQPASDTIFTETYYAYPEVAGSAALIEKWALLRDVRGSV
type: DOMAIN
name: Anticodon_Ile_BEm
description: Isoleucyl tRNA synthetase type 1, anticodon-binding domain

phrase: PYANGDIHLGH
type: CONSERVED_SITE
name: aa-tRNA-synth_I_CS
description: Aminoacyl-tRNA synthetase, class I, conserved site
Protein sequence:
MLDIKIIRKTPEECETRLRKKDPKISLEPVLSLDKEVRQLKTDSETLQAQRRLLSQDIHKAKTQGVDATNLIQEVETLAADLEKIEQHLDQKNAQLHELLSHLPNYPADDIPVSEDKAGNQVIKSVGDLPIFSFPPKHHLELNQELDILDFQAAAKTTGSGWPAYKNRGVLLEWALLTYMLQKQAAHGFQLWLPPLLVKKEILFGSGQIPKFDGQYYRVEDGEQYLYLIPTAEVVLNGFRSQDILTEKELPLYYAACTPCFRREAGAAGAQERGLVRVHQFHKVEMFAFTTPNQDDIAYEKMLSIVEEMLTELKLPYRLSLLSTGDMSFTASKTIDAEVWLPGQKAFYEVSSISQCTDFQSRRSGTRYKDSQGKLQFVHTLNGSGLATPRLLVAILENNQQADGSVVIPEVLRPYLGGLEILLPKDQ

Annotated regions:
phrase: MLDIKIIRKTPEECETRLRKKDPKISLEPVLSLDKEVRQLKTDSETLQAQRRLLSQDIHKAKTQGVDATNLIQEVETLAADLEKIEQHLDQKNAQLHELLSHLPNY
type: DOMAIN
name: Ser-tRNA-synth_1_N
description: Serine-tRNA synthetase, type1, N-terminal

phrase: MLQKQAAHGFQLWLPPLLVKKEILFGSGQIPKFDGQYYRVEDGEQYLYLIPTAEVVLNGFRSQDILTEKELPLYYAACTPCFRREAGAAGAQERGLVRVHQFHKVEMFAFTTPNQDDIAYEKMLSIVEEMLTELKLPYRLSLLSTGDMSFTASKTIDAEVWLPGQKAFYEVSSISQCTDFQSRRSGTRYKDSQGKLQFVHTLNGSGLATPRLLVAILENNQQADGSVVI
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: NQVIKSVGDLPIFSFPPKHHLELNQELDILDFQAAAKTTGSGWPAYKNRGVLLEWALLTYMLQKQAAHGFQLWLPPLLVKKEILFGSGQIPKFDGQYYRVEDGEQYLYLIPTAEVVLNGFRSQDILTEKELPLYYAACTPCFRREAGAAGAQERGLVRVHQFHKVEMFAFTTPNQDDIAYEKMLSIVEEMLTELKLPYRLSLLSTGDMSFTASKTIDAEVWLPGQKAFYEVSSISQCTDFQSRRSGTRYKDSQGKLQFVHTLNGSGLATPRLLVAILENNQQADGSVVIPEVLRPY
type: DOMAIN
name: SerRS_core
description: Serine-tRNA ligase catalytic core domain

phrase: YRVEDGEQYLYLIPTAEVVLNGFRSQDILTEKELPLYYAACTPCFRREAGAAGAQERGLVRVHQFHKVEMFAFTTPNQDDIAYEKMLSIVEEMLTELKLPYRLSLLSTGDMSFTASKTIDAEVWLPGQKAFYEVSSISQCTDFQSRRSGTRYKDSQGKLQFVHTLNGSGLATPRLLVAILEN
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)
Protein sequence:
MNKTQVPSLITSQSWYVIDAKNQKLGRMSTHISNILRGKNKPSYTPYLDTGDYVIVINSSEVSVSGNKTTQKLYRRHSGQPGGLKVETFEQLQTRLPNRIVEKSVKGMLPKGPLGRKLFTKLKVYPGPSHPHAAQKPQEYMV

Annotated regions:
phrase: VKGMLPKGPLGRKLFTKLKVYP
type: CONSERVED_SITE
name: Ribosomal_uL13_CS
description: Large ribosomal subunit protein uL13, conserved site
Protein sequence:
MAAGLVRMNTPGYAELHCLSNFSFQRGASSADELFRRAREQGYQALAITDECTLAGIVRAWQAAKVHQLRLIVGSEVQLCDGPKLVLLVENLTGYQNLCALITRARRRAEKGAYQLFRDDLLLHHQGLLALWVAADSGDTATGAWLRSVFAERLWLAVHLHRGSDDAVRLQRLRALAADVGIRAVACGDVHMHVRGRRALQDCMTAIRQHCQVSEAGRFLFANGERHLRSQAQLAELYPLDLLAETLVIARRCQFDLSELNYQYPRELVPEGHTPASWLRELCEQGMPLRWPDGPSGKVRDVLAKELGLIEELGYESYFLTVHDIVAFARSQRILCQGRGSAANSVVCFVLGITELDPMKHHLLFERFLSRERNEPPDIDVDFEHDRREEVIQYVFRRYGRHRAALTAVVNTYHAAGAVRDVARALGLPADQVDALAKCCGRWSDRIPDDQRLAEAGFEAGSPSLRRVLVLAGELIGFPRHLSQHPGGFVISQQPLDQLVPVENAAMPERTVIQWDKDDLDMVGLLKVDVLALGMLSALRRCFDQLQHHRGRHLTLATIPSEDPATYAMISRAETMGVFQIESRAQMAMLPRLRPQKFYDLVIEVAIVRPGPIQGDMVHPYLRRRLKQEPVTYPSPQLKEVFERTLGVPLFQEQVMELAMVAADYTPGEADQLRRSMAAWKRHGGLEPHRERLVQGMLRNGYTLAFAERIFEQIKGFGSYGFPESHAASFALLCYASSWLKCHEPAIFTCALVNSWPMGFYSPDQLLQEARRQGIEVRPVDVCHSDWDCTLEPDAEGTLAIRMGLRLVRGLAEADAKRVQQARSQRPWRNVEDLCLRAGLDARARARLADGGALRALASDRHQARWQVAAVQPQLPLFADVQALPEEPVQLPVPTVGEDLMADYQTLGTTLGPHPLALLRARLRALGCRSSSELQGVEHGDNIAVAGLVVGRQRPQTASGVTFVTLEDEHGMVNVVVWRALAERQRRALVGSQLLKVSGRLEQENGVRHLIARRLEDVSPLLQGLDVRSRDFH

Annotated regions:
phrase: AELHCLSNFSFQRGASSADELFRRAREQGYQALAITDECTLAGIVRAWQAAKVHQLRLIVGSEVQLC
type: DOMAIN
name: Pol/His_phosphatase_N
description: Polymerase/histidinol phosphatase, N-terminal

phrase: AVAGLVVGRQRPQTASGVTFVTLEDEHGMVNVVVWRALAERQRRALVGSQLLKVSGRLEQENGVRHLIARRLE
type: DOMAIN
name: NA-bd_OB_tRNA
description: OB-fold nucleic acid binding domain, AA-tRNA synthetase-type

phrase: SWLRELCEQGMPLRWPDGPSGKVRDVLAKELGLIEELGYESYFLTVHDIVAFARSQRILCQGRGSAANSVVCFVLGITELDPMKHHLLFERFLSRERNEPPDIDVDFEHDRREEVIQYVFRRYGRHRAALTAVVNTYHAAGAVRDVARALGLPADQVDALAKCCGRWSDRIPDDQRLAEAGFEAGSPSLRRVLVLAGELIGFPRHLSQHPGGFVISQQPLDQLVPVENAAMPERTVIQWDKDDLDMVGLLKVDVL
type: DOMAIN
name: DNA_pol3_alpha_NTPase_dom
description: Bacterial DNA polymerase III, alpha subunit, NTPase domain

phrase: GIEVRPVDVCHSDWDCTLEPDAEGTLAIRMGLRLVRGLAEADAKRVQQARSQRPWRNVEDLCLRAGLDARARARLADGGALRALASDRHQ
type: DOMAIN
name: DNAPol_HHH
description: DNA polymerase, helix-hairpin-helix motif

phrase: ELHCLSNFSFQRGASSADELFRRAREQGYQALAITDECTLAGIVRAWQAAKVHQLRLIVGSEVQLCDGPKLVLLVENLTGYQNLCALITRARRRAEKGAYQLFRDDLLLHHQGLLAL
type: DOMAIN
name: PHP_dom
description: PHP domain

phrase: MLSALRRCFDQLQHHRGRHLTLATIPSEDPATYAMISRAETMGVFQIESRAQMAMLPRLRPQKFYDLVIEVAIVRPGPIQGDMVHPYLRRRLKQEPVTYPSPQLKEVFERTLGVPLFQEQVMELAMVAADYTPGEADQLRRSMAAWKRHGGLEPHRERLVQGMLRN
type: DOMAIN
name: DNA_pol3_finger
description: DNA polymerase III alpha subunit finger domain
Protein sequence:
MKVLGEASSYPYRSCIIVVFLSVSLFWLRPSTYHPQQQNLNPENVTRLESENETKTNYIIRFKQYKPAKDHRIYLESKVRSGGWGWIERINPATKYPTDFGVLWIEESGKEAVVGEIERLEMVKDVNVEFKYQRVLLGGSFPDGKKRPGKIFTSMSFEEGTESSPMADTSNTTLNWSRHLLAQKTQVTSMFGADHLWKKGYTGAKVKMAIFDTGIRADHPHFRKIKERTNWTNEDTLNDNLGHGTFVAGVIAGRNPECLGFASDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATDMDVLNLSIGGPDYLDLPFVEKVWEITASNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDNDDHIASFSSRGMSTWELPHGYGRVKPDVVAYGRDIMGSKISTGCKSLSGTSVASPVVAGIVCLLVSVIPEARRKDLLNPASMKQALVEGAAKLSGPNMYEQGAGRVDLLESYEILKSYHPRASIFPSILDYNDCPYSWPFCRQPLYAGAMPIIFNTTILNGMGVIGYIESPPTWHPANEEGNLLSIHFKYPDVIWPWTGYLALHMQIKEEGAQFTGEIEGNVTVKVYSPPASGESGPRRSTCSLQLKLKVIPTPPRAKRILWDQFHSIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMYNMLRDAGYYIETLGSPLTCFDAQQYGTLLMVDLEDDYFPEEIEKLRDDVINTGLGLVVFAEWYNVDTMVKMRFFDDNTRSWWTPVTGGANIPALNNLLASFGIAFGDK

Annotated regions:
phrase: KTNYIIRFKQYKPAKDHRIYLESKVRSGGWGWIERINPATKYPTDFGVLWIEESGKEAVVGEIERLEMVKDV
type: DOMAIN
name: MBTP1_N
description: Membrane-bound transcription factor site-1 protease-like, N-terminal domain

phrase: FPSILDYNDCPYSWPFCRQPLYAGAMPIIFNTTILNGMGVIGYIESPPTWHPANEEGNLLSIHFKYPDVIWPWTGYLALHMQIKEEGAQFTGEIEGNVTVKVYSPPASGESGPRRSTCSLQLKLKVIP
type: DOMAIN
name: MBTPS1_3rd
description: MBTPS1, third domain

phrase: GTSVASPVVA
type: ACTIVE_SITE
name: Peptidase_S8_Ser-AS
description: Peptidase S8, subtilisin, Ser-active site

phrase: HGTFVAGVIA
type: ACTIVE_SITE
name: Peptidase_S8_His-AS
description: Peptidase S8, subtilisin, His-active site

phrase: WKKGYTGAKVKMAIFDTGIRADHPHFRKIKERTNWTNEDTLNDNLGHGTFVAGVIAGRNPECLGFASDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATDMDVLNLSIGGPDYLDLPFVEKVWEITASNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDNDDHIASFSSRGMSTWELPHGYGRVKPDVVAYGRDIMGSKISTGCKSLSGTSVASPVVAGIVCLLVSVIPEARRKDLLNPASMKQALVEGAAKLS
type: DOMAIN
name: Site-1_peptidase_cat_dom
description: Site-1 peptidase catalytic domain

phrase: PPRAKRILWDQFHSIKYPPGYIPRDSLDVRNDILDWHGDHLHTNFHIMYNMLRDAGYYIETLGSPLTCFDAQQYGTLLMVDLEDDYFPEEIEKLRDDVINTGLGLVVFAEWYNVDTMVKMRFFDDNTRSWWTPVTGGANIPALNNLLASFGIAFGD
type: DOMAIN
name: MBTPS1_4th
description: MBTPS1, fourth domain

phrase: GAKVKMAIFDTGIRADHPHFRKIKERTNWTNEDTLNDNLGHGTFVAGVIAGRNPECLGFASDTEIYAFRVFTDAQVSYTSWFLDAFNYAIATDMDVLNLSIGGPDYLDLPFVEKVWEITASNIIMVSAIGNDGPLYGTLNNPADQSDVIGVGGIDNDDHIASFSSRGMSTWELPHGYGRVKPDVVAYGRDIMGSKISTGCKSLSGTSVASPVVAGIVCLLVSVIPEARRKDLLNPASMKQALVEGAAKLSGP
type: DOMAIN
name: Peptidase_S8/S53_dom
description: Peptidase S8/S53 domain
Protein sequence:
MADPAGTDGEGTGCNGWFYVEAVIDRQTGDNISEDENEDSSDTGEDMVDFIDNCNVYNNQAEAETAQALFHAQEAEEHAEAVQVLKRKYVGSPLSDISSCVDYNISPRLKAICIENNSKTAKRRLFELPDSGYGNTEVETQQMVQVEEQQTTLSCNGSDGTHSERENETPTRNILQVLKTSNGKAAMLGKFKELYGVSFMELIRPFQSNKSTCTDWCVAAFGVTGTVAEGFKTLLQPYCLYCHLQSLACSWGMVMLMLVRFKCAKNRITIEKLLEKLLCISTNCMLIQPPKLRSTAAALYWYRTGMSNISDVYGETPEWIERQTVLQHSFNDTTFDLSQMVQWAYDNDVMDDSEIAYKYAQLADSDSNACAFLKSNSQAKIVKDCGTMCRHYKRAEKRQMSMGQWIKSRCDKVSDEGDWRDIVKFLRYQQIEFVSFLSALKLFLKGVPKKNCILIHGAPNTGKSYFGMSLISFLQGCIISYANSKSHFWLQPLADAKIGMLDDATTPCWHYIDNYLRNALDGNPVSIDVKHKALMQLKCPPLLITSNINAGKDDRWPYLHSRLVVFTFPNPFPFDKNGNPVYELSDKNWKSFFSRTWCRLNLHEEEDKENDGDSFSTFKCVSGQNIRTL

Annotated regions:
phrase: MADPAGTDGEGTGCNGWFYVEAVIDRQTGDNISEDENEDSSDTGEDMVDFIDNCNVYNNQAEAETAQALFHAQEAEEHAEAVQVLKRKYVGSPLSDISSCVDYNISPRLKAICIENNSKTAKRRLFELPDSGYGN
type: DOMAIN
name: PPV_DNA_helicase_E1_N
description: DNA helicase E1, N-terminal, Papillomavirus

phrase: TTFDLSQMVQWAYDNDVMDDSEIAYKYAQLADSDSNACAFLKSNSQAKIVKDCGTMCRHYKRAEKRQMSMGQWIKSRCDKVSDEGDWRDIVKFLRYQQIEFVSFLSALKLFLKGVPKKNCILIHGAPNTGKSYFGMSLISFLQGCIISYANSKSHFWLQPLADAKIGMLDDATTPCWHYIDNYLRNALDGNPVSIDVKHKALMQLKCPPLLITSNINAGKDDRWPYLHSRLVVFTFPNPFPFDKNGNPVYELSDKNWKSFFSRTWCRLNLHEEEDKENDGDSFSTFK
type: DOMAIN
name: PPV_DNA_helicase_E1_C
description: DNA helicase E1, C-terminal, Papillomavirus

phrase: IEFVSFLSALKLFLKGVPKKNCILIHGAPNTGKSYFGMSLISFLQGCIISYANSKSHFWLQPLADAKIGMLDDATTPCWHYIDNYLRNALDGNPVSIDVKHKALMQLKCPPLLITSNINAGKDDRWPYLHSRLVVFTFPNPFPFDKNGNP
type: DOMAIN
name: Helicase_SF3_DNA-vir
description: Helicase, superfamily 3, DNA virus

phrase: KFKELYGVSFMELIRPFQSNKSTCTDWCVAAFGVTGTVAEGFKTLLQPYCLYCHLQSLACSWGMVMLMLVRFKCAKNRITIEKLLEKLLCISTNCMLIQPPKLRSTAAALYWYRTGMSNISDVYGETPEWIERQTVLQ
type: DOMAIN
name: PPV_E1_DBD
description: DNA helicase E1, DNA-binding domain, papillomavirus
Protein sequence:
MIDKLGDFKRDYFCGELTENNIGDEVRLLGWADSVRDHGGVIFINLRDKEGIIQVVIDPSKSPKEAYEKAKKVRSEYVLAVRGRVQRRPAGTENPKLPTGTIEIAVDELRILNTCDILPFPIEDGISAHEEVRLRYRFLDIRRPEMMKKLILRHEVYQATREYLAGHGFLEVETPMLTKSTPEGARDFLVPARLEKGKFYALPQSPQLFKQILMVSGIDRYFQIVKCFRDEDLRKDRQPEFTQIDFEMSFVDEEDVITVSEGLIHYIFKKVLGIELKLPFKRMSYTEAIERYGTDKPDLRYSLELKDITDIAKDVQFKVFKDTVEKGGIVKGINVKGGSKFSRKEIDDLTEEAKKYGAKGMAWIKINEDGSLQSPIVKFFTEEQINKIKEIMEGENGDLLIFIADSYEITHRVLGFLRKHLAEKLKLIPENVWEFVWVVDFPLVEWDEEEGRLVALHHPFTSPKEEDIDRLDEAIQDKKVALSFRSRAYDLVLNGEEIGGGSIRIHSSHIQKKVFELLGISDEEAEEKFGFLINALKYGAPPHGGLAFGLDRIVALMTGSESIRDVIAFPKTQKGICPLTDAPDFVQEDQLEELGIEVNIPEETV

Annotated regions:
phrase: LRHEVYQATREYLAGHGFLEVETPMLTKSTPEGARDFLVPARLEKGKFYALPQSPQLFKQILMVSGIDRYFQIVKCFRDEDLRKDRQPEFTQIDFEMSFVDEEDVITVSEGLIHYIFKKVLGIELKLPFKRMSYTEAIERYGTDKPDLRYSLELKDITDIAKDVQFKVFKDTVEKGGIVKGINVKGGSKFSRKEIDDLTEEAKKYGAKGMAWIKINEDGSLQSPIVKFFTEEQINKIKEIMEGENGDLLIFIADSYEITHRVLGFLRKHLAEKLKLIPENVWEFVWVVDFPLVEWDEEEGRLVALHHPFTSPKEEDIDRLDEAIQDKKVALSFRSRAYDLVLNGEEIGGGSIRIHSSHIQKKVFELLGISDEEAEEKFGFLINALKYGAPPHGGLAFGLDRIVALMTGSESIRDVIAF
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: RDYFCGELTENNIGDEVRLLGWADSVRDHGGVIFINLRDKEGIIQVVIDPSKSPKEAYEKAKKVRSEYVLAVRGRVQRRPAGTENPKLPTGTIEIAVDELRILNTCDILPFPIEDGISAHEEVRLRYRFLDIRRPE
type: DOMAIN
name: Asp-tRNA-ligase_1_N
description: Aspartate-tRNA ligase, type 1, anticodon recognition domain

phrase: EEVRLRYRFLDIRRPEMMKKLILRHEVYQATREYLAGHGFLEVETPMLTKSTPEGARDFLVPARLEKGKFYALPQSPQLFKQILMVSGIDRYFQIVKCFRDEDLRKDRQPEFTQIDFEMSFVDEEDVITVSEGLIHYIFKKVLGIELKLPFKRMSYTEAIERYGTDKPDLRYSLELKDITDIAKDVQFKVFKDTVEKGGIVKGINVKGGSKFSRKEIDDLTEEAKKYGAKGMAWIKINEDGSLQSPIVKFFTEEQINKIKEIMEGENGDLLIFIADSYEITHRVLGFLRKHLAEKLKLIPENVWEFVWVVDFPLVEWDEEEGRLVALHHPFTSPKEEDIDRLDEAIQDKKVALSFRSRAYDLVLNGEEIGGGSIRIHSSHIQKKVFELLGISDEEAEEKFGFLINALKYGAPPHGGLAFGLDRIVALMTGSESIRDVIAFPKT
type: DOMAIN
name: Aa-tRNA-synt_II
description: Aminoacyl-tRNA synthetase, class II (D/K/N)

phrase: VRLLGWADSVRDHGGVIFINLRDKEGIIQVVIDPSKSPKEAYEKAKKVRSEYVLAVRGRVQRRPAGTENPKLPTGTIEIAVDELRI
type: DOMAIN
name: NA-bd_OB_tRNA
description: OB-fold nucleic acid binding domain, AA-tRNA synthetase-type

phrase: FKDTVEKGGIVKGINVKGGSKFSRKEIDDLTEEAKKYGAKGMAWIKINEDGSLQSPIVKFFTEEQINKIKEIMEGENGDLLIFIADSYEITH
type: DOMAIN
name: GAD_dom
description: GAD domain

phrase: LILRHEVYQATREYLAGHGFLEVETPMLTKSTPEGARDFLVPARLEKGKFYALPQSPQLFKQILMVSGIDRYFQIVKCFRDEDLRKDRQPEFTQIDFEMSFVDEEDVITVSEGLIHYIFKKVLGIELKLPFKRMSYTEAIERYGTDKPDLRYSLELKDITDIAKDVQFKVFKDTVEKGGIVKGINVKGGSKFSRKEIDDLTEEAKKYGAKGMAWIKINEDGSLQSPIVKFFTEEQINKIKEIMEGENGDLLIFIADSYEITHRVLGFLRKHLAEKLKLIPENVWEFVWVVDFPLVEWDEEEGRLVALHHPFTSPKEEDIDRLDEAIQDKKVALSFRSRAYDLVLNGEEIGGGSIRIHSSHIQKKVFELLGISDEEAEEKFGFLINALKYGAPPHGGLAFGLDRIVALMTGSESIRDVIAFPKTQ
type: DOMAIN
name: AspRS_core
description: Aspartate-tRNA ligase, type 1, core domain
Protein sequence:
MEKLARKSVQKLTPYLSARRIGGTGDVWLNANESPFDNEYRTNFARLNRYSDCQPKALIAAYAAYAGVKPEQTLTSRGADEGIELLIRAFCEPNEDAILYCPPTYGMYSVSAETIGVERKTVPLTEDWQLDLSGIEANLDKVKLVFVCSPNNPTGNLVKREDIIALLEMTKDRAIVVMDEAYIDFCPEASTVDLLAQYSNLAILRTLSKAFALAGLRCGFTLANEELINVLLKVIAPYPVPVPVAEIATQALSEAGLARAKFQVLDLNANRAYLQVGLSMIAGLEVFEGWGNYLLVKFPNGDELFKAAWESGIILRNSPIKDCVRISVGSRDECEKTLGFIRNYYS

Annotated regions:
phrase: RTNFARLNRYSDCQPKALIAAYAAYAGVKPEQTLTSRGADEGIELLIRAFCEPNEDAILYCPPTYGMYSVSAETIGVERKTVPLTEDWQLDLSGIEANLDKVKLVFVCSPNNPTGNLVKREDIIALLEMTKDRAIVVMDEAYIDFCPEASTVDLLAQYSNLAILRTLSKAFALAGLRCGFTLANEELINVLLKVIAPYPVPVPVAEIATQALSEAGLARAKFQVLDLNANRAYLQVGLSMIAGLEVFEGWGNYLLVKFPNGDELFKAAWESGIILRNSPIKDCVRISVGSRDECEKT
type: DOMAIN
name: Aminotransferase_I/II_large
description: Aminotransferase, class I/classII, large domain

phrase: TLSKAFALA
type: BINDING_SITE
name: Aminotrans_II_pyridoxalP_BS
description: Aminotransferase, class-II, pyridoxal-phosphate binding site
Protein sequence:
MNEINRLVIATGNTHKTEEIRKLLDPFIKTIDDLQLYPEIGEIPETGSTFEDNAALKAIAVGNYLGDSSWILSDDSGLEVNALNGRPGVFSARYAGENASDSENRKKLLRELKEEDPDRLDWSASFRCVMILVKGKSKLAKFEGSVHGVISDVEKGDHGFGYDSIFIPEGFESTFAELPLEVKNSMSHRGRALSDLKKWLLNGSYDH

Annotated regions: