nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MFKMELGQLLGWDAYFYSIFAQAMNMEEFTVVALRALRELRFDFFAYGMCSVTPFMRPKTYMYGNYPEHWLQRYQAANYALIDPTVKHSKVSSAPILWSNELFRNCPDLWSEANDSSLCHGLAQPSFNTQGRVGVLSLARKDNAISLQEFEALKPVTKAFAAAALEKISALETDVRAFNTDVEFSERECDVLRWTADGKTSEEIGVIMGVCTDTVNYHHRNIQRKIGASNRVQAVSYAVALGYI

Annotated regions:
phrase: FSERECDVLRWTADGKTSEEIGVIMGVCTDTVNYHHRNIQRKIGASNRVQAVSY
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: FSERECDVLRWTADGKTSEEIGVIMGVCTDTVNYHHRNIQRKIGASNRVQAVSYA
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: DVEFSERECDVLRWTADGKTSEEIGVIMGVCTDTVNYHHRNIQRKIGASNRVQAVSY
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: AFNTDVEFSERECDVLRWTADGKTSEEIGVIMGVCTDTVNYHHRNIQRKIGASNRVQAVSYAVAL
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: FTVVALRALRELRFDFFAYGMCSVTPFMRPKTYMYGNYPEHWLQRYQAANYALIDPTVKHSKVSSAPILWSNELFRNCPDLWSEANDSSLCHGLAQPSFNTQGRVGVLSLARKDNAISLQEFEALKPVTKAFAA
type: DOMAIN
name: TF_LuxR_autoind-bd_dom
description: Transcription factor LuxR-like, autoinducer-binding domain

phrase: GKTSEEIGVIMGVCTDTVNYHHRNIQR
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: FSERECDVLRWTAD
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: GKTSEEIGVIMGVCTD
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal

phrase: TVNYHHRNIQRK
type: DOMAIN
name: Tscrpt_reg_LuxR_C
description: Transcription regulator LuxR, C-terminal
Protein sequence:
MGVHLEVLDTGEQLMVPVDVLEEENKGTLWKFLLSGAMAGAVSRTGTAPLDRARVYMQVYSSKSNFRNLLSGLRSLVQEGGVRSLWRGNGINVLKIAPEYAIKFSVCEQSKNFFYGVHSSQLFQERVVAGSLAVAVSQTLINPMEVLKTRLTLRFTGQYKGLLDCARQILERDGTRALYRGYLPNMLGIIPYACTDLAVYELLQCLWQKLGRDMKDPSGLVSLSSVTLSTTCGQMASYPLTLVRTRMQAQDTVEGSNPTMQGVFKRILSQQGWPGLYRGMTPTLLKVLPAGGISYLVYEAMKKTLGVQVLSR

Annotated regions:
phrase: QLFQERVVAGSLAVAVSQTLINPMEVLKTRLTLRFTGQYKGLLDCARQILERDGTRALYRGYLPNMLGIIPYACTDLAVYELLQC
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier

phrase: GTLWKFLLSGAMAGAVSRTGTAPLDRARVYMQVYSSKSNFRNLLSGLRSLVQEGGVRSLWRGNGINVLKIAPEYAIKFSVCEQSKN
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier

phrase: PSGLVSLSSVTLSTTCGQMASYPLTLVRTRMQAQDTVEGSNPTMQGVFKRILSQQGWPGLYRGMTPTLLKVLPAGGISYLVYEAMKK
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier

phrase: SLSSVTLSTTCGQMASYPLTLVRTRMQAQDTVEGSNPTMQGVFKRILSQQGWPGLYRGMTPTLLKVLPAGGISYLVYEAMKKT
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier

phrase: TLWKFLLSGAMAGAVSRTGTAPLDRARVYMQVYSSKSNFRNLLSGLRSLVQEGGVRSLWRGNGINVLKIAPEYAIKFSVCEQSKNFF
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier

phrase: FQERVVAGSLAVAVSQTLINPMEVLKTRLTLRFTGQYKGLLDCARQILERDGTRALYRGYLPNMLGIIPYACTDLAVYELLQCLW
type: REPEAT
name: Mitochondrial_sb/sol_carrier
description: Mitochondrial substrate/solute carrier
Protein sequence:
MKKPLLLTLLCMILAGCDNPKSLESFTPEMASFSNEFDFDPLRGPVKDFSQTLMSENGEVAKQVTGTLSQEGCFDTLELHDLENNTGLALVLDANYYRDAQTLEKKVQLQGKCQLAALPSAGVTWETDDNGFVVSATGKEMKVEYRYDSEGYPLGKTTINSQNTLSVTAKPSADPRKKLDYTAVSRVDDRQVGNVTQSCEYDAYANPVDCRLVIVDESVKPAVSHHYTIKNRIDYY

Annotated regions:
Protein sequence:
MLQTIYESESYFSSDGVAGREQLLAEQRMHAMIGKDIKSEFPIGLESISPLDLRTDLRTAVPVGDPGLREKQLQQELLIIKQQQQIQKQLLIAEFQKQHENLTRQHQVQLQEHLKLQQELLAMKQQQELLEREKEQKMEQQRKEQEAERHRQEQQLCHPRSKDRVKERAVASTEVKQKLQEFILSKSATKEPLTNGTSHSMGRHPKLWYTAAHHTSLDQSSPPPSGTSPTYKCPPPGNQDDFPLRKTASEPNLKVRSRLKQKVVERRSSPLLRRKDSIVSSSYKKRIFEVAESSVSSSSPVSGPSSPNNGPVAMEAEHETPVLSVNSRIENLVSHHHLVHHERSLSLLNLYTSPSLPNITLGLHATATQLNTSSSLKEQQKYDPQAPRQGVSMAGQYAGGIPTSSNHVSLEGKANSHQAILQHLLLKEQMRQQKILASGGTPVLHQSPLAAKDRVSPAGRVAHKLPRHRPLHRTQSAPLPQSTLAQLVIQQQHQQFLEKQKQYQQQIHMNKILSKSIEQLRQPEGHLEEAEEDLHGDNLMQEKSSSIDNTRSYSSTDLRTGPFGSVKVKEEPPDSENEIKTHLQSEQKSVFAQQVT

Annotated regions:
phrase: DPGLREKQLQQELLIIKQQQQIQKQLLIAEFQKQHENLTRQHQVQLQEHLKLQQELLAMKQQQELLEREKEQKMEQQRKEQEAERHRQEQQ
type: DOMAIN
name: Hist_deacetylase_Gln_rich_N
description: Histone deacetylase, glutamine rich N-terminal domain
Protein sequence:
MKKQRIVVKIGSSSLTNSKGSIDEAKIREHVQAISVLKKAGHEMILITSGAVAAGFSSLGYPSRPVTIKGKQAAAAVGQTLLMQQYMNQFKQYSLTPGQILLTRNDFSKRERYRNAYATIMELLERGVIPIINENDSTSVEELTFGDNDMLSALVSGLIHADQLMILTDINGLYDANPNENPEAKRFDYLPEITPELLGYAGSAGSKVGTGGMKSKLLATQTALSLGVKVFIGTGSGEQKLADILDGRGDGTYIGDKELSSVNNTRQWIQFHSPISGEIIIDAGAEEAMIHNGSSLLPAGVVGVNGSFPKGAVVEVRGPGGVIGKGQTHYSSEEIMEAKGKRSDELDFEKTFEVIHRNDWVNVKD

Annotated regions:
phrase: GEIIIDAGAEEAMIHNGSSLLPAGVVGVNGSFPKGAVVEVRGPGGVIGKGQTHYSSEEIMEAKGKRSDEL
type: DOMAIN
name: PUA
description: PUA domain

phrase: RIVVKIGSSSLTNSKGSIDEAKIREHVQAISVLKKAGHEMILITSGAVAAGFSSLGYPSRPVTIKGKQAAAAVGQTLLMQQYMNQFKQYSLTPGQILLTRNDFSKRERYRNAYATIMELLERGVIPIINENDSTSVEELTFGDNDMLSALVSGLIHADQLMILTDINGLYDANPNENPEAKRFDYLPEITPELLGYAGSAGSKVGTGGMKSKLLATQTALSLGVKVFIGTGSGEQKLADILDGRGDGTY
type: DOMAIN
name: G5K_ProB
description: Glutamate-5-kinase domain

phrase: SKVGTGGMKSKLLATQT
type: CONSERVED_SITE
name: Glutamate_5-kinase_CS
description: Glutamate 5-kinase, conserved site

phrase: GEIIIDAGAEEAMIHNGSSLLPAGVVGVNGSFPKGAVVEVRGPGGVIGKGQTHYSSEEIMEAKGKRSDELDFEKTFEV
type: DOMAIN
name: PUA
description: PUA domain

phrase: QRIVVKIGSSSLTNSKGSIDEAKIREHVQAISVLKKAGHEMILITSGAVAAGFSSLGYPSRPVTIKGKQAAAAVGQTLLMQQYMNQFKQYSLTPGQILLTRNDFSKRERYRNAYATIMELLERGVIPIINENDSTSVEELTFGDNDMLSALVSGLIHADQLMILTDINGLYDANPNENPEAKRFDYLPEITPELLGYAGSAGSKVGTGGMKSKLLATQTALSLGVKVF
type: DOMAIN
name: Asp/Glu/Uridylate_kinase
description: Aspartate/glutamate/uridylate kinase
Protein sequence:
MADAPSGPSVLSHYPGAGLAGEQQREEERHKGCHHHQLNGLISPDLRHLKAVSSLKNKLLEQKTRKDSGLVQPQGRTDTRAPNGLERLQGEEEKLSACLASCSLRGDGEALGNHVSQGENDDTIRYVRYESELQMADIMRLITRDLSEPYSIYTYRYFIHNWPQLCFLAMVGEECVGAIVCKLDMHKKMFRRGYIAMLAVDSKYRRKGIGTHLVKKAIYAMVEGDCDEVVLETEITNKSALKLYENLGFVRDKRLFRYYLNGVDALRLKLWLR

Annotated regions:
phrase: RYVRYESELQMADIMRLITRDLSEPYSIYTYRYFIHNWPQLCFLAMVGEECVGAIVCKLDMHKKMFRRGYIAMLAVDSKYRRKGIGTHLVKKAIYAMVEGDCDEVVLETEITNKSALKLYENLGFVRDKRLFRYYLNGVDALRLKLWL
type: DOMAIN
name: GNAT_dom
description: GNAT domain

phrase: ADIMRLITRDLSEPYSIYTYRYFIHNWPQLCFLAMVGEECVGAIVCKLDMHKKMFRRGYIAMLAVDSKYRRKGIGTHLVKKAIYAMVEGDCDEVVLETEITNKSALKLYENLG
type: DOMAIN
name: GNAT_dom
description: GNAT domain
Protein sequence:
MTLPSPPMSLLAELTHRCPLSCPYCSNPLELERKAAELDTATWTAVLEQAAELGVLQVHFSGGEPMARPDLVELVSVARRLNLYSNLITSGVLLDEPKLEALDRAGLDHIQLSFQDVTEAGAERIGGLKGAQARKVAAARLIRASGIPMTLNFVVHRENVARIPEMFALARELGAGRVEIAHTQYYGWGLKNREALLPSRDQLEESTRAVEAERAKGGLSVDYVTPDYHADRPKPCMGGWGQRFVNVTPSGRVLPCHAAEIIPDVAFPNVQDVTLSEIWNISPLFNMFRGTDWMPEPCRSCERKERDWGGCRCQAMALTGNAANTDPVCSLSPYHDRVEQAVENNMQPESTLFYRRYT

Annotated regions:
phrase: PSPPMSLLAELTHRCPLSCPYCSNPLELERKAAELDTATWTAVLEQAAELGVLQVHFSGGEPMARPDLVELVSVARRLNLYSNLITSGVLLDEPKLEALDRAGLDHIQLSFQDVTEAGAERIGGLKGAQARKVAAARLIRASGIPMTLNFVVHRENVARIPEMFALARELGAGRVEIAHTQYYGWGLKNREALLPSRDQLEESTRAVEAERAKGGLSVDYVTPDYHADRPKPCMGGWGQRFVNVTPSGRVLPCHAAEIIPDVAFPNVQDVTLSEIWNISPLFNMFRGTDWMPEPCRSCERKERDWGGCRCQAMALTGNAANTDPVCSLSPYHDRVEQAVENNMQPESTLFYR
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: LTHRCPLSCPY
type: CONSERVED_SITE
name: MoaA_NifB_PqqE_Fe-S-bd_CS
description: MoaA/NifB/PqqE, iron-sulphur binding, conserved site

phrase: GWGQRFVNVTPSGRVLPCHAAEIIPDVAFPNVQDVTLSEIWNISPLFNMFRGTDWMPEPCRSCERKERDWGGCRCQAMALTGNAANTDPV
type: DOMAIN
name: 4Fe4S-binding_SPASM_dom
description: 4Fe4S-binding SPASM domain

phrase: GWGQRFVNVTPSGRVLPCHAAEIIPDVAFPNVQDVTLSEIWNISPLFNMFRGTDWMPEPCRSC
type: DOMAIN
name: 4Fe4S-binding_SPASM_dom
description: 4Fe4S-binding SPASM domain

phrase: LTHRCPLSCPYCSNPLELERKAAELDTATWTAVLEQAAELGVLQVHFSGGEPMARPDLVELVSVARRLNLYSNLITSGVLLDEPKLEALDRAGLDHIQLSFQDVTEAGAERIGGLKGAQARKVAAARLIRASGIPMTLNFVVHRENVARIPEMFA
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: PSPPMSLLAELTHRCPLSCPYCSNPLELERKAAELDTATWTAVLEQAAELGVLQVHFSGGEPMARPDLVELVSVARRLNLYSNLITSGVLLDEPKLEALDRAGLDHIQLSFQDVTEAGAERIGGLKGAQARKVAAARLIRASGIPMTLNFVVHRENVARIPEMFALARELGAGRVEIAHTQYYGWGLKNREALLPSRDQLEESTRAVEAERAKGG
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: MSLLAELTHRCPLSCPYCSNPLELERKAAELDTATWTAVLEQAAELGVLQVHFSGGEPMARPDLVELVSVARRLNLYSNLITSGVLLDEPKLEALDRAGLDHIQLSFQDVTEAGAERIGGLKGAQARKVAAARLIRASGIPMTLNFVVHRENVARIPEMFALARELGAGRVEIAHTQYYGWGLKNREALLPSRDQLEESTR
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain
Protein sequence:
MELPSNLLPDEASPEWMNKGDNAWQLTAATMVGLQSIPGLVILYGSLVKKTWAINSAFMAFYAFASVLLCWVSWAYQMSFGEKMVFFLGKPNVALDEKFLLGKAFLGNFPNATMVFYQGVFAGLTLILIAGALLGRMNIRAWMLFVPLWVTFSYTVVAFSIWCPDGWLAKRGVIDFAGGYVIHLSAGVAGFTAAYWVGPRADKDRETFPAATNNMIMVLAGAGLLWMGWSGFNGGAPFVASTIASLAILNTHVCTAASITVWVMLDTFYFGKPTVFGAVQGMITGLVCITPAAGVVQGWAAILMGFISGSIPWYTMMVLHNKVNFLKKIDDPMAVFHTHAIAGALGGILTGFFAVPKLCRLFYMVPDWEKYIGLAYGLQNKGATQAGLKQMVIQIEAIVFVICYNVLMTSLICLIVRVIVPLRLNGDALQMGDKAIHGEDAFALHSEATKFVNIKRNQVYDTQDFSSIPESRSLGELQMV

Annotated regions:
phrase: DFAGGYVIHLSAGVAGFTAAYWVGP
type: CONSERVED_SITE
name: Ammonium_transpt_CS
description: Ammonium transporter, conserved site

phrase: AWQLTAATMVGLQSIPGLVILYGSLVKKTWAINSAFMAFYAFASVLLCWVSWAYQMSFGEKMVFFLGKPNVALDEKFLLGKAFLGNFPNATMVFYQGVFAGLTLILIAGALLGRMNIRAWMLFVPLWVTFSYTVVAFSIWCPDGWLAKRGVIDFAGGYVIHLSAGVAGFTAAYWVGPRADKDRETFPAATNNMIMVLAGAGLLWMGWSGFNGGAPFVASTIASLAILNTHVCTAASITVWVMLDTFYFGKPTVFGAVQGMITGLVCITPAAGVVQGWAAILMGFISGSIPWYTMMVLHNKVNFLKKIDDPMAVFHTHAIAGALGGILTGFFAVPKLCRLFYMVPDWEKYIGLAYGLQNKGATQAGLKQMVIQIEAIVFVICYNVLMTSLICLIVRVIVPLRLNGDALQMGDKAIHGED
type: DOMAIN
name: NH4_transpt_AmtB-like_dom
description: Ammonium transporter AmtB-like domain
Protein sequence:
MMENNKRKRKARKKICVFCADKSKNIDYKDVHKLKKYITERGKILPRRISGNCAIHQRELTQAIKRSRHIALLPYTMD

Annotated regions:
phrase: IDYKDVHKLKKYITERGKILPRR
type: CONSERVED_SITE
name: Ribosomal_bS18_CS
description: Small ribosomal subunit protein bS18, conserved site
Protein sequence:
MGIHIPYLTSKTSQSNVGDAVGNADSVEFNSEHDSPSKRGKITLESHEIQRAPASDDEDRIQIKPVNDEDDTSVMITFNQSLSPFIITLTFVASISGFMFGYDTGYISSALISIGTDLDHKVLTYGEKEIVTAATSLGALITSIFAGTAADIFGRKRCLMGSNLMFVIGAILQVSAHTFWQMAVGRLIMGFGVGIGSLIAPLFISEIAPKMIRGRLTVINSLWLTGGQLVAYGCGAGLNYVNNGWRILVGLSLIPTAVQFTCLCFLPDTPRYYVMKGDLARATEVLKRSYTDTSEEIIERKVEELVTLNQSIPGKNVPEKVWNTIKELHTVPSNLRALIIGCGLQAIQQFTGWNSLMYFSGTIFETVGFKNSSAVSIIVSGTNFIFTLVAFFSIDKIGRRTILLIGLPGMTMALVVCSIAFHFLGIKFDGAVAVVVSSGFSSWGIVIIVFIIVFAAFYALGIGTVPWQQSELFPQNVRGIGTSYATATNWAGSLVIASTFLTMLQNITPAGTFAFFAGLSCLSTIFCYFCYPELSGLELEEVQTILKDGFNIKASKALAKKRKQQVARVHELKYEPTQEIIEDI

Annotated regions:
phrase: IMGFGVGIGSLIAPLFISEIAPKMI
type: CONSERVED_SITE
name: Sugar_transporter_CS
description: Sugar transporter, conserved site

phrase: AFFSIDKIGRRTILLI
type: CONSERVED_SITE
name: Sugar_transporter_CS
description: Sugar transporter, conserved site

phrase: LTFVASISGFMFGYDTGYISSALISIGTDLDHKVLTYGEKEIVTAATSLGALITSIFAGTAADIFGRKRCLMGSNLMFVIGAILQVSAHTFWQMAVGRLIMGFGVGIGSLIAPLFISEIAPKMIRGRLTVINSLWLTGGQLVAYGCGAGLNYVNNGWRILVGLSLIPTAVQFTCLCFLPDTPRYYVMKGDLARATEVLKRSYTDTSEEIIERKVEELVTLNQSIPGKNVPEKVWNTIKELHTVPSNLRALIIGCGLQAIQQFTGWNSLMYFSGTIFETVGFKNSSAVSIIVSGTNFIFTLVAFFSIDKIGRRTILLIGLPGMTMALVVCSIAFHFLGIKFDGAVAVVVSSGFSSWGIVIIVFIIVFAAFYALGIGTVPWQQSELFPQNVRGIGTSYATATNWAGSLVIASTFLTMLQNITPAGTFAFFAGLSCLSTIFCYFCYPEL
type: DOMAIN
name: MFS_dom
description: Major facilitator superfamily domain

phrase: AGTAADIFGRKRCLMG
type: CONSERVED_SITE
name: Sugar_transporter_CS
description: Sugar transporter, conserved site
Protein sequence:
MLLFIILSVGVDAISYIQNDRSNDLCIVYEMTSFGTSFNNANDSLVKLHKHMGLKYEVCKIESNANALTQMQKCNCIYDDTPQIVVFTNFKKSSLKTLIGTENKCELLPQTTIYTPTVDIESEYFIYGNDVKICYLDKNLLGIGCDATDTTSWLDLDAGLPTNHALDIPEITSDGFKLFAKYSDSFLCQRLMDEPKKQIQFYAEVDNVPSNDVIESSRSWASVWKVVKTVLHFTYHILDLFYGNRRATARMIEHSPLG

Annotated regions:
Protein sequence:
MEGVTIVDHPLVQHKLTLVRDKSISTKSFRELIKEIGMLLCYEVTRDLPLADTVIETPLATMHSAKIAGKKLVFVPMLRAGTTFVDGMMDLVPTARVAHIGLYREPHSFAAVEYFFKSPSDLGERLAIVVTPVVATANTAVAAIDRLKERGAKDIRLACLIAAPEGLERLRGLHPDVPIWTAAVDEGLDENGFILPGLGDAGDRAYGTR

Annotated regions:
phrase: VDHPLVQHKLTLVRDKSISTKSFRELIKEIGMLLCYEVTRDLPLADTVIETPLATMHSAKIAGKKLVFVPMLRAGTTFVDGMMDLVPTARVAHIGLYREPHSFAAVEYFFKSPSDLGERLAIVVTPVVATANTAVAAIDRLKERGAKDIRLACLIAAPEGLERLRGLHPDVPIWTAAVDEGLDENGFILPGLGDAGDRAYG
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain

phrase: HSAKIAGKKLVFVPMLRAGTTFVDGMMDLVPTARVAHIGLYREPHSFAAVEYFFKSPSDLGERLAIVVTPVVATANTAVAAIDRLKERGAKDIRLACLIAAPEGLERLRGLHPDVPIWTAA
type: DOMAIN
name: PRibTrfase_dom
description: Phosphoribosyltransferase domain
Protein sequence:
MLDNMQFHSPAPEHPQLNGGINKIPASHKIGYKLNQQVQRLAVVRNNIEERLNSMESSHGQISDSSVVRAIDASIDDFLIPSPPLSPKLRQCPIISQPQLVNVESDHRELIMLTPVWEAGLNSQKYNHNTRNFLSQYSFFRDMKTTKRIPNKENRKLKVVKSVVNSEALPKRRRYDRKIKRRSRELYEDDGNRSENYDEESAQEVPVRSVTPIRQVKRSLHTISSPLASQGVVNNVPKYIPSMSWEKLPDYSPPLHTLPNSNNKVLKVEWKGSPMDLNHDPLKQRLHPAELVLAQILRLPCDLYLDSKRRFFLEKVHRFKKGLPFRRTDAQKACRIDVNKASRLFAAFEKVGWLQDKHFEKYL

Annotated regions:
phrase: QRLHPAELVLAQILRLPCDLYLDSKRRFFLEKVHRFKKGLPFRRTDAQKACRIDVNKASRLFAAFEKVGW
type: DOMAIN
name: SWIRM
description: SWIRM domain

phrase: LKVEWKGSPMDLNHDPLKQRLHPAELVLAQILRLPCDLYLDSKRRFFLEKVHRFKKGLPFRRTDAQKACRIDVNKASRLFAAFEKVGWLQDKHFEKY
type: DOMAIN
name: SWIRM
description: SWIRM domain
Protein sequence:
MKELLVATGNKGKMNEIRQILAGCVDRLYCLADFPDLPEVIEDGLTFEENACKKAMTAARATGIPSIADDSGLVVTALGGHPGILSARYSGIGASDAENNQKLLKEMAGFTARQRSCFFYCAVALCFPDGTCRTFCGTLNGTLLDSPRGGGGFGYDPLFLLPEYGKTLAELGDEVKNGISHRGMALLKLRDFFSRSNDG

Annotated regions:
Protein sequence:
MDLGIPDLLDAWLEPPEDIFSTGSVLELGLHCPPPEVPVTRLQEQGLQGWKSGGDRGCGLQESEPEDFLKLFIDPNEVYCSEASPGSDSGISEDPCHPDSPPAPRATSSPMLYEVVYEAGALERMQGETGPNVGLISIQLDQWSPAFMVPDSCMVSELPFDAHAHILPRAGTVAPVPCTTLLPCQTLFLTDEEKRLLGQEGVSLPSHLPLTKAEERVLKKVRRKIRNKQSAQDSRRRKKEYIDGLESRVAACSAQNQELQKKVQELERHNISLVAQLRQLQTLIAQTSNKAAQTSTCVLILLFSLALIILPSFSPFQSRPEAGSEDYQPHGVTSRNILTHKDVTENLETQVVESRLREPPGAKDANGSTRTLLEKMGGKPRPSGRIRSVLHADEM

Annotated regions:
phrase: VLKKVRRKIRNKQSAQDSRRRKKEYIDGLESRVAACSAQNQELQKKVQELERHNISLVAQLRQ
type: DOMAIN
name: bZIP
description: Basic-leucine zipper domain

phrase: ERVLKKVRRKIRNKQSAQDSRRRKKEYIDGLESRVAACSAQNQELQKKVQELERHNIS
type: DOMAIN
name: bZIP
description: Basic-leucine zipper domain

phrase: ERVLKKVRRKIRNKQSAQDSRRRKKEYIDGLESRVAACSAQNQELQKKVQELERHNISLVAQLR
type: DOMAIN
name: bZIP
description: Basic-leucine zipper domain
Protein sequence:
MKQSKMPIPTLREMPSDAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQEFEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAAYERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWVVLDKSVASFDEIPAEVQEEIKAELLKWIVSGEDTIAYSSESSYAANLEMATNEYKPSNRVVAEEEVTRVATPDVKSIDEVAAFLNVPEEQTIKTLFYIADGELVAALLVGNDQLNEVKLKNHLGADFFDVASEEEVANVVQAGFGSLGPVGLPENIKIIADRKVQDVRNAVVGANEDDYHLTGVNPGRDFTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVNKTPKGEYRYAWGINFPKELAPFDVHLITVNVKDEEAQALTEKLEASLMGAGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKKAADGIVEVKIKATGDTIEVHADNVLETLEILSKK

Annotated regions:
phrase: YKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAAYERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWVVLDKSVASFDEIPAEVQEEIKAELLKWIVSGEDTIAYSSESSYAANLEMATNEYKPSNRVVAEEEVTRVATPDVKSIDEVAAFLNVPEEQTIKTLFYIADGELVAALLVGNDQLNEVKLKNHLGADFFDVASEEEVANVVQAGFGSLGPVGLPENIKIIADRKVQDVRNAVVGANEDDYHLTGVNPGRDFTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQ
type: DOMAIN
name: aa-tRNA-synt_IIb
description: Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)

phrase: TPDVKSIDEVAAFLNVPEEQTIKTLFYIADGELVAALLVGNDQLNEVKLKNHLGADFFDVASEEEVANVVQAGFGSLGPVGLPENIKIIADRKVQDVRNAVVGANEDDYHLTGVN
type: DOMAIN
name: YbaK/aa-tRNA-synth-assoc-dom
description: YbaK/aminoacyl-tRNA synthetase-associated domain

phrase: PFDVHLITVNVKDEEAQALTEKLEASLMGAGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKKAADGIVEVKIKATGDTIEVHADNVLETL
type: DOMAIN
name: ProRS_anticodon_short
description: Proline--tRNA ligase, anticodon binding domain

phrase: DVHLITVNVKDEEAQALTEKLEASLMGAGYEVLTDDRNERVGVKFSDSDLIGLPIRITVGKKAADGIVEVKIKATGDTIEVHADNVLET
type: DOMAIN
name: Anticodon-bd
description: Anticodon-binding

phrase: RQVSAGVYSYLPLANRVIEKAKNIMRQEFEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAAYERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAITSARTDLDRWVVLDKSVASFDEIPAEVQEEIKAELLKWIVSGEDTIAYSSESSYAANLEMATNEYKPSNRVVAEEEVTRVATPDVKSIDEVAAFLNVPEEQTIKTLFYIADGELVAALLVGNDQLNEVKLKNHLGADFFDVASEEEVANVVQAGFGSLGPVGLPENIKIIADRKVQDVRNAVVGANEDDYHLTGVNPGRDFTAEYVDIREVREGEISPDGQGVLNFARGIEIGHIFKLGTRYSASMGADVLDENGRAVPIIMGCYGIGVSRLLSAVMEQHARLFVNKT
type: DOMAIN
name: aa-tRNA-synth_II
description: Aminoacyl-tRNA synthetase, class II

phrase: DAQVISHALMLRAGYVRQVSAGVYSYLPLANRVIEKAKNIMRQEFEKIGAVEMLAPALLSAELWRESGRYETYGEDLYKLKNREKSDFILGPTHEETFTAIVRDSVKSYKQLPLNLYQIQPKYRDEKRPRNGLLRTREFIMKDAYSFHANYDSLDSVYDEYKAAYERIFTRSGLDFKAIIGDGGAMGGKDSQEFMAIT
type: DOMAIN
name: ProRS_core_prok
description: Prokaryote proline-tRNA ligase core domain
Protein sequence:
MATPSAIPTNSKRDTTAQFHRVTRGNRSLWYQLTVLQQPERARACGSGMKANSDRRPVDPPPVVELRIVEGPTLEEGKDVTFDYNANFFLYASLEHARPIASCRVSTPTTNNPPILTGVPASGMAYLDRPSEAGYFIFPDLSVRHEGLYRLTFSLFETTKEEQDFDIQPADGDLPPGVDFRMEIKTDPFSVFSAKKFPGLMESTQLSKTVADQGCRVRIRRDVRMRKRDTKSGGNNNNNNNAGNNAGNNGFERREEDFGRRRTSTSTYVPPSPSVYSTEGHYRRDSQASYPPTPAAAPLPRMNTEPSRGSIKISALVEPMPVIEPQVDPLPELPPVNVGGKRKHESVFAQNTRPLFNGQRQMDPHYGRSHRGYSPDHDQGSYSRADGQISVIQFNKYEY

Annotated regions:
phrase: NRSLWYQLTVLQQPERARACGSGMKANSDRRPVDPPPVVELRIVEGPTLEEGKDVTFDYNANFFLYASLEHARPIASCRVSTPTTNNPPILTGVPASGMAYLDRPSEAGYFIFPDLSVRHEGLYRLTFSLFETTKEEQDFDIQPADGDLPPGVDFRMEIKTDPFSVFSAKKFPGLMESTQLSKTVADQGCRVRI
type: DOMAIN
name: Velvet_dom
description: Velvet domain

phrase: STPTTNNPPILTGVPASGMAYLDRPSEAGYFIFPDLSVRHEGLYRLTFSLFETTKEEQDFDIQPADGDLPPGVDFRMEIKTDPFSVFSAKKFPGLMESTQLSKTVADQGCRVRIRR
type: DOMAIN
name: Velvet_dom
description: Velvet domain

phrase: YQLTVLQQPERARACGSGMKANSDRRPVDPPPVVELRIVEGPTLEEGKDVTFDYNANFFLYASLEH
type: DOMAIN
name: Velvet_dom
description: Velvet domain
Protein sequence:
MTAELQQDDAAGAADGHGSSCQMLLNQLREITGIQDPSFLHEALKASNGDITQAVSLLTDQRVKEPSHDTAATEPSEVEESATSKDLLAKVIDLTHDNKDDLQAAIALSLLESPNIQTDSRDLNRIHEANSAETKRSKRKRCEVWGENHNPNNWRRVDGWPVGLKNVGNTCWFSAVIQSLFQLPEFRRLVLSYSLPQNILENCRSHTEKRNIMFMQELQYLFALLLGSNRKFVDPSAALDLLKGAFRSSEEQQQDVSEFTHKLLDWLEDAFQLAVNVNSNPRTKSENPMVQLFYGTFLTEGVREGKPFCNNETFGQYPLQVNGYHNLDECLEGAMVEGDIALLPSDRSVKYGQERWFTKLPPVLTFELSRFEFNQSLGQPEKIHNKLEFPQVIYMDRYMYKSKELIRSKRESIRKLKEEIQVLQQKLERYVKYGSGPSRFPLPDMLKYVIEFASTKPASESCLSGSVEHMTLPLPSVHCPISDLTAKESSSPKSCSQNAEGSFSSPEDALPNSEVMNGPFTSPHSSLEMPAPPPAPRTVTDEEMNFVKTCLQRWRSEIEQDIQDLKNCISSTTQAIEQMYCDPLLRQVPYRLHAVLVHEGQASAGHYWAYIYNQPRQIWLKYNDISVTESSWEELERDSYGGLRNVSAYCLMYINDKLPHCSAEAAHGESDQTAEVEALSVELRQYIQEDNWRFEQEVEEWEEEQSCKIPQMESSPNSSSQDFSTSQESSAASSHGVRCLSSEHAVIAKEQTAQAIANTAHAYEKSGVEAALSEVMLSPAMQGVLLAIAKARQTFDRDGSEAGLIKAFHEEYSRLYQLAKETPTSHSDPRLQHVLVYFFQNEAPKRVVERTLLEQFADRNLSYDERSISIMKVAQAKLMEIGPEDMNMEEYKRWHEDYSLFRKVSVYLLTGLELFQKGKYQEALSYLVYAYQSNAGLLVKGPRRGVKESVIALYRRKCLLELNAKAASLFETNDDHSVTEGINVMNELIIPCIHLIINNDISKDDLDAIEVMRNHWCSYLGKDIAENLQLCLGEFLPRLLDPSAEIIVLKEPPTIRPNSPYDLCSRFAAVMESIQGVSTVTVK

Annotated regions:
phrase: GLKNVGNTCWFSAVI
type: CONSERVED_SITE
name: USP_CS
description: Ubiquitin specific protease, conserved site

phrase: YRLHAVLVHEGQASAGH
type: CONSERVED_SITE
name: USP_CS
description: Ubiquitin specific protease, conserved site

phrase: EPSEVEESATSKDLLAKVIDLTHDNKDDLQAAIALSLLESPNIQTDSRDLN
type: CONSERVED_SITE
name: USP25/28_UIM
description: Ubiquitin carboxyl-terminal hydrolase 25/28, UIM

phrase: VGLKNVGNTCWFSAVIQSLFQLPEFRRLVLSYSLPQNILENCRSHTEKRNIMFMQELQYLFALLLGSNRKFVDPSAALDLLKGAFRSSEEQQQDVSEFTHKLLDWLEDAFQLAVNVNSNPRTKSENPMVQLFYGTFLTEGVREGKPFCNNETFGQYPLQVNGYHNLDECLEGAMVEGDIALLPSDRSVKYGQERWFTKLPPVLTFELSRFEFNQSLGQPEKIHNKLEFPQVIYMDRYMYKSKELIRSKRESIRKLKEEIQVLQQKLERYVKYGSGPSRFPLPDMLKYVIEFASTKPASESCLSGSVEHMTLPLPSVHCPISDLTAKESSSPKSCSQNAEGSFSSPEDALPNSEVMNGPFTSPHSSLEMPAPPPAPRTVTDEEMNFVKTCLQRWRSEIEQDIQDLKNCISSTTQAIEQMYCDPLLRQVPYRLHAVLVHEGQASAGHYWAYIYNQPRQIWLKYNDISVTESSWEELERDSYGGLRNVSAYCLM
type: DOMAIN
name: Peptidase_C19_UCH
description: Peptidase C19, ubiquitin carboxyl-terminal hydrolase

phrase: VGLKNVGNTCWFSAVIQSLFQLPEFRRLVLSYSLPQNILENCRSHTEKRNIMFMQELQYLFALLLGSNRKFVDPSAALDLLKGAFRSSEEQQQDVSEFTHKLLDWLEDAFQLAVNVNSNPRTKSENPMVQLFYGTFLTEGVREGKPFCNNETFGQYPLQVNGYHNLDECLEGAMVEGDIALLPSDRSVKYGQERWFTKLPPVLTFELSRFEFNQSLGQPEKIHNKLEFPQVIYMDRYMYKSKELIRSKRESIRKLKEEIQVLQQKLERYVKYGSGPSRFPLPDMLKYVIEFASTKPASESCLSGSVEHMTLPLPSVHCPISDLTAKESSSPKSCSQNAEGSFSSPEDALPNSEVMNGPFTSPHSSLEMPAPPPAPRTVTDEEMNFVKTCLQRWRSEIEQDIQDLKNCISSTTQAIEQMYCDPLLRQVPYRLHAVLVHEGQASAGHYWAYIYNQPRQIWLKYNDISVTESSWEELERDSYGGLRNVSAYCLMYIN
type: DOMAIN
name: USP_dom
description: Ubiquitin specific protease domain

phrase: SSCQMLLNQLREITGIQDPSFLHEALKASNGDITQAVSLLTDQRV
type: DOMAIN
name: UBA_8
description: UBA-like domain
Protein sequence:
MQNNSVQQANISIMSSFSGSKKVYVEGSSSDIQVPMREIALSPTTGSFGEEENAPVRVYDTSGPYTDPEVTINIQEGLKPLRQKWITERGDVEEYEGRAIKPEDNGYKKAKPNVSYPGLKRKPLRAKAGQNVTQMHYAKKGIITPEMEFIAIREHVSPEFVRDEVASGRAIIPSNINHPESEPMIIGRNFHVKINANIGNSAVTSSIEEEVEKMTWAIRWGADTMMDLSTGKDIHTTREWIIRNCPVPVGTVPIYQALEKVNGVAEDLTWEIYRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRTTGIVSRGGAIMAQWCLAHHQESFLYTHFEEICEIMKMYDIAFSLGDGLRPGSIADANDEAQFAELETLGELTQIAWKHDVQVMIEGPGHVPMHKIKENVDKQMDICKEAPFYTLGPLTTDIAPGYDHITSAIGAAMIGWYGTAMLCYVTPKEHLGLPNRDDVREGVITYKIAAHAADLAKGHPGAQIRDDALSKARFEFRWRDQFNLSLDPERALEYHDETLPAEGAKTAHFCSMCGPKFCSMRISQDIRDYAKKNDLSEAEAINKGLKEKAKEFVDTGSNLYQ

Annotated regions:
phrase: FSGSKKVYVEGSSSDIQVPMREIALSPTTGSFGEEENAPVRVYDTSGPYTDPEVTINIQEGLKPLRQKWITERGDV
type: DOMAIN
name: ThiC-associated_dom
description: ThiC-associated domain
Protein sequence:
MSAPTKIDLLDRLPQEITDLLASHGQPPYRGMQIFQWIHDKKTADFESMTNLPKDLRNILVENATISSLEPVAILDSKDGSRKLIFEVEQGRQFSAILMPSLDRVTLCISSQIGCRMGCQFCLTGTMGRVRNLTAAEILGQVHAAIRLSPQRVSNVVFMGMGEPLDNLEAVIRAVKIITHREGLKIAPRRTTVSTVGLVPKLVEFIESGTKASIAISLCATTDEARNRVVPIGKKYGIEALISALEANRLPHGHVYTIEYQLISGVGDSLEDARRLSKMLAHFPSKVNLIPFNPWLGSPYKRPTEEAIEAFKKILEARNHTVTIRHSRGQDIGAACGQLGEVVSP

Annotated regions:
phrase: SLDRVTLCISSQIGCRMGCQFCLTGTMGRVRNLTAAEILGQVHAAIRLSPQRVSNVVFMGMGEPLDNLEAVIRAVKIITHREGLKIAPRRTTVSTVGLVPKLVEFIESGTKASIAISLCATTDEARNRVVPIGKKYGIEALISALEANRLPHGHVYTIEYQLISGVGDSLEDARRLSKMLAHFPSKVNLIPFNPWLGSPYKRPTEEAIEAFKKILEARNHTVTIRHSRGQ
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: SSQIGCRMGCQFCLTGTMGRVRNLTAAEILGQVHAAIRLSPQRVSNVVFMGMGEPLDNLEAVIRAVKIITHREGLKIAPRRTTVSTVGLVPKLVEFIESGTKASIAISLCATTDEARNRVVPIGKKYGIEALISALE
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TKIDLLDRLPQEITDLLASHGQPPYRGMQIFQWIHDKKTADFESMTNLPKDLRNILVENATISSLEPVAILDSKDGSRKLIFEVEQGRQFSAILMPSLDRVTLCISSQIGCRMGCQFCLTGTMGRVRNLTAAEILGQVHAAIRLSPQRVSNVVFMGMGEPLDNLEAVIRAVKIITHREGLKIAPRRTTVSTVGLVPKLVEFIESGTKASIAISLCATTDEARNRVVPIGKKYGIEALISALEANRLPHGHVYTIEYQLISGVGDSLEDARRLSKMLAHFPSKVNLIPFNPWLGSPYKRPTEEAIEAFKKILEARNHTVTIRHSRGQDIGAACGQL
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: IDLLDRLPQEITDLLASHGQPPYRGMQIFQWIHDKKTADFESMTNLPKDLRNILVENAT
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain
Protein sequence:
MTAPIRPQPGILDIALYQGGASKIAGHADPLKLSSNENPFGPSPAAVQAMADAVASSHRYPNTDHADLRAAISEIHGLEADNIICGVGSDEVIHFLCQCYAGPGDEVLYTQHGFGMYPIAAKAAGATPVQVAEDARHVDVDALIAGITPATRLIFIANPSNPCATMIDNGEITRLADALPDQCLLILDGAYVEFADGYDGGKNLVEARDNVVMTRTFSKVYGLGGLRVGYGYGPRHVIDTLNRIRGPFNLSGMALAGAEAAVRDVDWVNECLRVNADERARLVGGLRQLGLACDDSHANFVLARFASEAAADAADAHLKRDGIIVRAPKSYGLPDCLRITVGRPEDNSRVLASLTALVAA

Annotated regions:
phrase: DPLKLSSNENPFGPSPAAVQAMADAVASSHRYPNTDHADLRAAISEIHGLEADNIICGVGSDEVIHFLCQCYAGPGDEVLYTQHGFGMYPIAAKAAGATPVQVAEDARHVDVDALIAGITPATRLIFIANPSNPCATMIDNGEITRLADALPDQCLLILDGAYVEFADGYDGGKNLVEARDNVVMTRTFSKVYGLGGLRVGYGYGPRHVIDTLNRIRGPFNLSGMALAGAEAAVRDVDWVNECLRVNADERARLVGGLRQLGLACDDSHANFVLARFASEAAADAADAHLKRDGIIVRAPKSYGLPDCLRITVGRPEDNSRVL
type: DOMAIN
name: Aminotransferase_I/II_large
description: Aminotransferase, class I/classII, large domain