Protein sequence:
MATKGMNKSRARSRGVNMVAARVKNLAVKVKNKTKQSARGLRGFLLFLVAQIFWARKLTPQVKRLWRMVDKVQGLRILKNIRNIVTNLMKGLAGRKKKRSLTVPLVLLLIPLIAYSATVTRQRGLGLLLNVTFADVGKTYEVEGGNCSVNTLDAGKWCEDYVEYECVTLSEGEEPDDLDCWCYGVDNVRVTYGRCKSGGSRRSRRSAVITPHVDKGLTTRQEKWLPTKIGEQQLQKVEKWIMRNPLYALGAVALAYFVGTSNVQRVVIAILLLGIGPAYSTHCLGIPKRDFIRGLDGNTWVSVVLEQGSCVTLIADNKPSVDIWLSSIVVDTPTLVRKVCYASSVTGSKATGACPTMGDAHMSEEGNEEWECKRSYSDRGWGNGCGLFGKGSIVACAKFSCTHEMEVYQIDATKIEYTISAQVHSGAKKDDWENHTKLVTFVPTTGTSTVAFTGYGNFGLECHVQMMVDLSNSYLVKVGTDAWLVNKQWVHDITLPWQSGTGGHWRDKHFMVDFEEPHAVTMKALVLGSQEGALRTALSGAMVVELNSNRYSLKGGHVTCKAYMNNLILKGSTYSMCKRGMSFAKQPVETDHGTAVMQIKVTTGAPCRIPVIAADSMAGTENRGSVITTNPIAASNNDEVLVEISPPFGESYIIVGNGDDKLTYHWQRSGSTIGNLFTETMKGAQRMIITGEHSWDFGSTGGFFSSIAKAVHTVFGAAFHAIFGGLSWITKILIGGLLIWLGLNSRSSSMSMGFICIGALLLVLATGVGAEVGCSLSWKQREMKCGDGVFVFKDSDDWFSKYQYIPEDPKTMATLIHQAHQDGLCGLSSVSDLEHRMWYSRVDEINAILDENEVDLTVVVQESDAVYLRGSHAFPRPKSELKYGWKTWGKNIIFNPSRKNGTFIIDGKSKAECPFNKRVWNSIRVEEFGTGVYQTRVFMRPEFDYTKLCDTGTLGAAVKGSVSAHGDPMFWMESEEINGTWMITTLEALNYRECEWPSSHTLDGAKVVESDMFMPRSLAGPISKHNHIPGYKVQTSGPWHNVPLEIKREECPGTTVVVDEKCDDRAKSVRSTTDSGKIIPEWCCRSCTMPPVSFWGPDGCWYSMEVRPKHTNEAHLVKSWVVASKGDVDPFSLGLLMLFLCSDMFLMKRFSMRAILVGSLVMLGAMTLGSLSYLDLLRYAITVGMYMAEINSGGDVTHLALLAVFRVRAGFVSMLALKRLWSPREGFVATCGIVMVQLALGDILSTDIMEWLNAAGMAVLIIKSIVEPKRCNAVLPLLCLLTPLTVAEIQRAVMFVCSIVIFVTVWQTDSVSTRKTIPLVALTVCSFFKWTSPFLGIVCYLAFTRLPQRSWPLGETMAAVGLVGVLAGMGLKDMNGMLGPVAVGGVLLIVMSLSGKVDGLVIKKVADVTWDEDAEISGASHRYDVEQTDTGEFKLRNEEPAPWIQVAVLTIAILSAATHPACLAVVTIGWFAWQKTTTRSGVLWDIPTVVPPEEVSYLEDGVYTINQNSFLGLAQKGVGVVKDGVFHTMWHVTRGAFLLHAGKRMTPSWANVKEDLISYGGGWKLDAKWDGSEEVQLIAVSPGKVPVNVQTTPSVFQLKNGKEIGAVNLDYPSGTSGSPILNKNGDVIGLYGNGILIGNNTYVSAIAQSDSVEEGGTEQLQDIPTMLKKGMLTVLDFHPGAGKTRIYLPQILKECEKLKLKTLVLAPTRVVLSEMREAMPKMSIKYHTQAFSNTSTGKEIIDAMCHATLTHRMLEPTRVTNWEVVIMDEAHFMDPASIAARGWAAHRSRARECATIFMSATPPGTSNEFPESNGMIEDVKKDVPSEPWTKGHEWILEDRRPTAWFLPSIRIANSIANCLRKADRTVVVLNRKTFEKEYPTIKSKKPDFILATDIAEMGANLKVERVIDCRTAYKPILVDDATKVMVKGPLRISASSAAQRRGRIGRDPNRDTDTYIYGDSTTEDNGHYVCWTEGSMLLDNMEIRNGMIAPLYGVEGTKTTTSPGETRLREDQRKVFRELVKRLDMPVWFSWQVAKAGLKVQDRSWCFDGEDDNTLLNDNGEPILARSPGGAKKPLKPRWVDTRVCSDNASLIDFIKFAEGRRSASGILLGLQGFPEFLSGKMREAIDTVTVLYTSDTGSRAYKHALAMMPEATTIFLLVMLAIICTSGVIMFFLAPKGLSRMSMAMMTMLVSAYLMSLGGMNPVQISCVMLVFFIFMVVLIPEPGTQRSTYDNQIIYLLVGVLSLILLVAANEMELLEKTKRDIFGAVVVEEAKRWTFPEFDLRPGAAWTVYVGLVTPGNPMLHHWIKIDYGNISLSGITQNAQVLGLMDRGIPFIKMNMSVVILLLSAWNGITLLPLFAGMGAAALHWGFILPGLRAQAAKAAQKRVYHGVAKNPVVDGNPTVDIDDAPGMPAMYEKKLALVILLALSILNLVLTRTPFATAEMVVLGSAAVGPLIEGDTNAYWNGPIAVAFSGLMRGNYYATIGLAYNGWLAKQTRRGKAAGVTLGEVWKRQLNMLGKQEFERYKVPDITEVDRTAARRYLKEGRTDVGISVSRGAAKIRWLHERGYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVFTMPTEPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPYHPDVIEKLERLQLRFGGGIVRVPFSRNSTHEMYYISGARNNITHMVNTTSRSLLRRMTRPSGKAIIEGDVFLPTGTRSVASEAGTIDHEALKLRVDQIKAEYSKTWTHDSNHPYRTWHYLGSYLCKATGSSSSMINGIVKMLSMPWDKFESVTLLAMTDTTPFGQQRVFKEKVDTKAPPPPPGTRAIMRVVNAWLFQHLARKKKPRICTREEFVAKVRSHAALGAYLEEQDKWKSASEAVQDPQFWKLVDDERKLHLQGQCRTCVYNMMGKREKKPSEFGKAKGSRAIWYMWLGARFLEFEALGFLNEDHWVSRENSGGGVEGTGLQYLGYILKELGGKTGGNMYADDTAGWDTRITEEDLEDEQEILKYMDEKHKKLAWAVTELAYKNKVVKVMRPGPGGLTFMDIISRRDQRGSGQVVTYALNTVTNLKVQLIRMAEAEHVITNFDVDTVSQKTLQDLRCWLDRFGADRLSRMAVSGDDCVVKPIDDQFADALTHLNSMSKIRKDIDDWKPSQGWASWEDVPFCSHHFHELILKDGRSIIAPCRDQDELIGRARVSPGNGWMIRETACLSKAYAQMWLLMYFHRRDLRVMANAINSTVPVDWVPTGRTTWSIHGKGEWMTTEDMLQVWNRVWIEDNPHQTDKTPITEWRDIPYLPKSIDKTCNSLVGTTQRASWARDIKHTVHRIRGLVGNEKYTDYLATMDRFRELDESGPGEVLW

Annotated regions:
phrase: YSMCKRGMSFAKQPVETDHGTAVMQIKVTTGAPCRIPVIAADSMAGTENRGSVITTNPIAASNNDEVLVEISPPFGESYIIVGNGDDKLTYHW
type: DOMAIN
name: Flavi_E_Ig-like
description: Glycoprotein E, immunoglobulin-like domain, flavivirus

phrase: GCSLSWKQREMKCGDGVFVFKDSDDWFSKYQYIPEDPKTMATLIHQAHQDGLCGLSSVSDLEHRMWYSRVDEINAILDENEVDLTVVVQESDAVYLRGSHAFPRPKSELKYGWKTWGKNIIFNPSRKNGTFIIDGKSKAECPFNKRVWNSIRVEEFGTGVYQTRVFMRPEFDYTKLCDTGTLGAAVKGSVSAHGDPMFWMESEEINGTWMITTLEALNYRECEWPSSHTLDGAKVVESDMFMPRSLAGPISKHNHIPGYKVQTSGPWHNVPLEIKREECPGTTVVVDEKCDDRAKSVRSTTDSGKIIPEWCCRSCTMPPVSFWGPDGCWYSMEVRPKHTNEAHLVKSWVVAS
type: DOMAIN
name: Flavi_NS1
description: Non-structural protein NS1, flavivirus

phrase: HCLGIPKRDFIRGLDGNTWVSVVLEQGSCVTLIADNKPSVDIWLSSIVVDTPTLVRKVCYASSVTGSKATGACPTMGDAHMSEEGNEEWECKRSYSDRGWGNGCGLFGKGSIVACAKFSCTHEMEVYQIDATKIEYTISAQVHSGAKKDDWENHTKLVTFVPTTGTSTVAFTGYGNFGLECHVQMMVDLSNSYLVKVGTDAWLVNKQWVHDITLPWQSGTGGHWRDKHFMVDFEEPHAVTMKALVLGSQEGALRTALSGAMVVELNSNRYSLKGGHVTCKAYMNNLILK
type: DOMAIN
name: Flavi_Glycoprot_E_cen/dimer
description: Envelope glycoprotein E, central and dimerisation domain, flavivirus

phrase: GKAAGVTLGEVWKRQLNMLGKQEFERYKVPDITEVDRTAARRYLKEGRTDVGISVSRGAAKIRWLHERGYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVFTMPTEPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPYHPDVIEKLERLQLRFGGGIVRVPFSRNSTHEMYYISGARNNITHMVNTTSRSLLRRMTRPSGKAIIEGDVFLPTGTR
type: DOMAIN
name: mRNA_cap_0/1_MeTrfase
description: mRNA cap 0/1 methyltransferase

phrase: ILLGLQGFPEFLSGKMREAIDTVTVLYTSDTGSRAYKHALAMMPEATTIFLLVMLAIICTSGVIMFFLAPKGLSRMSMAMMTMLVSAYLMSLGGMNPVQISCVMLVFFIFMVVLIPEPGTQRSTYDNQIIYLLVGVLSL
type: DOMAIN
name: Flavi_NS4A
description: Flavivirus non-structural protein NS4A

phrase: NEMELLEKTKRDIFGAVVVEEAKRWTFPEFDLRPGAAWTVYVGLVTPGNPMLHHWIKIDYGNISLSGITQNAQVLGLMDRGIPFIKMNMSVVILLLSAWNGITLLPLFAGMGAAALHWGFILPGLRAQAAKAAQKRVYHGVAKNPVVDGNPTVDIDDAPGMPAMYEKKLALVILLALSILNLVLTRTPFATAEMVVLGSAAVGPLIEGDTNAYWNGPIAVAFSGLMRGNYYATIGLAYNG
type: DOMAIN
name: Flavi_NS4B
description: Flavivirus non-structural protein NS4B

phrase: KKGMLTVLDFHPGAGKTRIYLPQILKECEKLKLKTLVLAPTRVVLSEMREAMPKMSIKYHTQAFSNTSTGKEIIDAMCHATLTHRMLEPTRVTNWEVVIMDEAHFMDPASIAARGWAAHRSRARECATIFMSATPPGTSNEFPES
type: DOMAIN
name: Flavi_DEAD
description: Non-structural protein NS3-like, DEAD box helicase, flavivirus

phrase: NSIANCLRKADRTVVVLNRKTFEKEYPTIKSKKPDFILATDIAEMGANLKVERVIDCRTAYKPILVDDATKVMVKGPLRISASSAAQRRGRIGRD
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: GLLMLFLCSDMFLMKRFSMRAILVGSLVMLGAMTLGSLSYLDLLRYAITVGMYMAEINSGGDVTHLALLAVFRVRAGFVSMLALKRLWSPREGFVATCGIVMVQLALGDILSTDIMEWLNAAGMAVLIIKSIVEPKRCNAVLPLLCLLTPLTVAEIQRAVMFVCSIVIFVTVWQTDSVSTRK
type: DOMAIN
name: Flavi_NS2A
description: Flavivirus non-structural protein NS2A

phrase: GNLFTETMKGAQRMIITGEHSWDFGSTGGFFSSIAKAVHTVFGAAFHAIFGGLSWITKILIGGLLIWLGLNSRSSSMSMGFICIGALLLVLATGVG
type: DOMAIN
name: Flavi_E_Stem/Anchor_dom
description: Flavivirus envelope glycoprotein E, Stem/Anchor domain

phrase: SGVLWDIPTVVPPEEVSYLEDGVYTINQNSFLGLAQKGVGVVKDGVFHTMWHVTRGAFLLHAGKRMTPSWANVKEDLISYGGGWKLDAKWDGSEEVQLIAVSPGKVPVNVQTTPSVFQLKNGKEIGAVNLDYPSGTSGSPILNKNGDVIGLYGNGILIGNNTYVSAIAQSDSVEEGGTE
type: DOMAIN
name: Flavi_NS3_S7
description: Non-structural protein NS3, peptidase S7, flavivirus

phrase: TLGEVWKRQLNMLGKQEFERYKVPDITEVDRTAARRYLKEGRTDVGISVSRGAAKIRWLHERGYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVFTMPTEPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPYHPDVIEKLERLQLRFGGGIVRVPFSRNSTHEMYYISGARNNITHMVNTTSRSLLR
type: DOMAIN
name: mRNA_cap_0/1_MeTrfase
description: mRNA cap 0/1 methyltransferase

phrase: LLLNVTFADVGKTYEVEGGNCSVNTLDAGKWCEDYVEYECVTLSEGEEPDDLDCWCYGVDNVRVTYGRCKSGGSRR
type: DOMAIN
name: Flavi_propep
description: Flavivirus polyprotein propeptide

phrase: YGDSTTEDNGHYVCWTEGSMLLDNMEIRNGMIAPLYGVEGTKTTTSPGETRLREDQRKVFRELVKRLDMPVWFSWQVAKAGLKVQDRSWCFDGEDDNTLLNDNGEPILARSPGGAKKPLKPRWVDTRVCSDNASLIDFIKFAE
type: DOMAIN
name: NS3-hel_C_flaviviridae
description: Flavivridae NS3 helicase, C-terminal helical domain

phrase: SRARSRGVNMVAARVKNLAVKVKNKTKQSARGLRGFLLFLVAQIFWARKLTPQVKRLWRMVDKVQGLRILKNIRNIVTNLMKGLAGRKKKRSLTVPLVLLLIPLI
type: DOMAIN
name: Flavi_capsidC
description: Capsid protein C, flavivirus

phrase: GNMYADDTAGWDTRITEEDLEDEQEILKYMDEKHKKLAWAVTELAYKNKVVKVMRPGPGGLTFMDIISRRDQRGSGQVVTYALNTVTNLKVQLIRMAEAEHVITNFDVDTVSQKTLQDLRCWLDRFGADRLSRMAVSGDDCVVKPIDDQFAD
type: DOMAIN
name: RNA-dir_pol_PSvirus
description: RNA-directed RNA polymerase, catalytic domain

phrase: VSRGAAKIRWLHERGYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVFTMPTEPSDTLLCDIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLAPYHPDVIEKLERLQLRFGGGIVRVPFSRNSTHEMYYIS
type: DOMAIN
name: RNA_MeTrfase_FtsJ_dom
description: Ribosomal RNA methyltransferase, FtsJ domain

phrase: LEDGVYTINQNSFLGLAQKGVGVVKDGVFHTMWHVTRGAFLLHAGKRMTPSWANVKEDLISYGGGWKLDAKWDGSEEVQLIAVSPGKVPVNVQTTPSVFQLKNGKEIGAVNLDYPSGTSGSPILNKNGDVIGLYGNGILIGNNTYVSAIAQ
type: DOMAIN
name: Flavi_NS3_S7
description: Non-structural protein NS3, peptidase S7, flavivirus

phrase: EGDVFLPTGTRSVASEAGTIDHEALKLRVDQIKAEYSKTWTHDSNHPYRTWHYLGSYLCKATGSSSSMINGIVKMLSMPWDKFESVTLLAMTDTTPFGQQRVFKEKVDTKAPPPPPGTRAIMRVVNAWLFQHLARKKKPRICTREEFVAKVRSHAALGAYLEEQDKWKSASEAVQDPQFWKLVDDERKLHLQGQCRTCVYNMMGKREKKPSEFGKAKGSRAIWYMWLGARFLEFEALGFLNEDHWVSRENSGGGVEGTGLQYLGYILKELGGKTGGNMYADDTAGWDTRITEEDLEDEQEILKYMDEKHKKLAWAVTELAYKNKVVKVMRPGPGGLTFMDIISRRDQRGSGQVVTYALNTVTNLKVQLIRMAEAEHVITNFDVDTVSQKTLQDLRCWLDRFGADRLSRMAVSGDDCVVKPIDDQFADALTHLNSMSKIRKDIDDWKPSQG
type: DOMAIN
name: Flavi_RdRp_fingers/palm
description: RNA-directed RNA polymerase, fingers/palm subdomains, flavivirus

phrase: PTMLKKGMLTVLDFHPGAGKTRIYLPQILKECEKLKLKTLVLAPTRVVLSEMREAMPKMSIKYHTQAFSNTSTGKEIIDAMCHATLTHRMLEPTRVTNWEVVIMDEAHFMDPASIAARGWAAHRSRARECATIFMSATPPGTSNEFPESNGMIEDV
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: STIGNLFTETMKGAQRMIITGEHSWDFGSTGGFFSSIAKAVHTVFGAAFHAIFGGLSWITKILIGGLLIWLGLNSRSSSMSMGFICIGALLLV
type: DOMAIN
name: Flavi_E_Stem/Anchor_dom
description: Flavivirus envelope glycoprotein E, Stem/Anchor domain

phrase: GETMAAVGLVGVLAGMGLKDMNGMLGPVAVGGVLLIVMSLSGKVDGLVIKKVADVTWDEDAEISGASHRYDVEQTDTGEFKLRNEEPAPWIQVAVLTIAILSAATHPACLAVVTIGWFAWQKTTT
type: DOMAIN
name: Flavi_NS2B
description: Non-structural protein NS2B, flavivirus

phrase: MIEDVKKDVPSEPWTKGHEWILEDRRPTAWFLPSIRIANSIANCLRKADRTVVVLNRKTFEKEYPTIKSKKPDFILATDIAEMGANLKVERVIDCRTAYKPILVDDATKVMVKGPLRISASSAAQRRGRIGRDPNRDTDTYIYGDSTTEDNGHYVCWTEGSMLLDNMEIRNGMIAPL
type: DOMAIN
name: Helicase_C-like
description: Helicase, C-terminal domain-like

phrase: SWPLGETMAAVGLVGVLAGMGLKDMNGMLGPVAVGGVLLIVMSLSGKVDGLVIKKVADVTWDEDAEISGASHRYDVEQTDTGEFKLRNEEPAPWIQVAVLTIAILSAATHPACLAVVTIGWFAWQKTTT
type: DOMAIN
name: Flavi_NS2B
description: Non-structural protein NS2B, flavivirus

phrase: SVEEGGTEQLQDIPTMLKKGMLTVLDFHPGAGKTRIYLPQILKECEKLKLKTLVLAPTRVVLSEMREAMPKMSIKYHTQAFSNTSTGKEIIDAMCHATLTHRMLEPTRVTNWEVVIMDEAHFMDPASIAARGWAAHRSRARECATIFMSATPPGTSNEFPESNGMIEDVKKDVPSEPWTKGHE
type: DOMAIN
name: Helicase_ATP-bd
description: Helicase superfamily 1/2, ATP-binding domain

phrase: EDVPFCSHHFHELILKDGRSIIAPCRDQDELIGRARVSPGNGWMIRETACLSKAYAQMWLLMYFHRRDLRVMANAINSTVPVDWVPTGRTTWSIHGKGEWMTTEDMLQVWNRVWIEDNPHQTDKTPITEWRDIPYLPKSIDKTCNSLVGTTQRASWARDIKHT
type: DOMAIN
name: Flavi_NS5_thumb
description: RNA-directed RNA polymerase, thumb subdomain, flavivirus

phrase: MSFAKQPVETDHGTAVMQIKVTTGAPCRIPVIAADSMAGTENRGSVITTNPIAASNNDEVLVEISPPFGESYIIVGNGDDKLTYHWQR
type: DOMAIN
name: Flavi_E_Ig-like
description: Glycoprotein E, immunoglobulin-like domain, flavivirus

phrase: ITPHVDKGLTTRQEKWLPTKIGEQQLQKVEKWIMRNPLYALGAVALAYFVGTSNVQRVVIAILLLGIGPAY
type: DOMAIN
name: Env_glycoprot_M_flavivir
description: Envelope glycoprotein M, flavivirus

phrase: MINGIVKMLSMPWDKFESVTLLAMTDTTPFGQQRVFKEKVDTKAPPPPPGTRAIMRVVNAWLFQHLARKKKPRICTREEFVAKVRSHAALGAYLEEQDKWKSASEAVQDPQFWKLVDDERKLHLQGQCRTCVYNMMGKREKKPSEFGKAKGSRAIWYMWLGARFLEFEALGFLNEDHWVSRENSGGGVEGTGLQYLGYILKELGGKTGGNMYADDTAGWDTRITEEDLEDEQEILKYMDEKHKKLAWAVTELAYKNKVVKVMRPGPGGLTFMDIISRRDQRGSGQVVTYALNTVTNLKVQLIRMAEAEHVITNFDVDTVSQKTLQDLRCWLDRFGADRLSRMAVSGDDCVVKPIDDQFADALTHLNSMSKIRKDIDDWKPSQGWASWEDVPFCSHHFHELILKDGRSIIAPCRDQDELIGRARVSPGNGWMIRETACLSKAYAQMWLLMYFHRRDLRVMANAINSTVPVDWVPTGRTTWSIHGKGEWMTTEDMLQVWNRVWIEDNPHQTDKTPITEWRDIPYLPKSIDKTCNSLVGTTQRASWARDIKHTVHRIRGLVGNEKYTDY
type: DOMAIN
name: Flavi_RdRp
description: RNA-dependent RNA polymerase, flavivirus