nwliu/Molinst-SwissProtCLAP huggingface dataset:
Protein sequence:
MIFQTTSEDLRTRARTGILNLNGVKLETPVFMPVGTRGVVKTISADDLEELEYSLILGNTYHLYLRPGTAVLERFGGLKKFSTWKRALLTDSGGYQVFSLNSLFKYEQDGVRFQSHIDGSRHYFTPNSVIDIQRTIGSDIMMVLDDCAPFDSSQERLRQSLDRTHRWAEMSVEYWEKNKNSSHLFGIFQGGIDLGLRLESLQKIVSLPFDGIAIGGLSVGEPRKDFIRILEGVSAYTDRSRPLYLMGVGTVPDILDGVKNGVDMFDCVLPTRNARNGQVFTSLGKINLRNEKWKSSDVPIDPHCGCKVCKRYSIGYIRHLHHVGELTAFSLSTYHNLYFMKNFLSEIRKSIQAGEFLKIYAKWKNLYEKPEFSG

Annotated regions:
phrase: RARTGILNLNGVKLETPVFMPVGTRGVVKTISADDLEELEYSLILGNTYHLYLRPGTAVLERFGGLKKFSTWKRALLTDSGGYQVFSLNSLFKYEQDGVRFQSHIDGSRHYFTPNSVIDIQRTIGSDIMMVLDDCAPFDSSQERLRQSLDRTHRWAEMSVEYWEKNKNSSHLFGIFQGGIDLGLRLESLQKIVSLPFDGIAIGGLSVGEPRKDFIRILEGVSAYTDRSRPLYLMGVGTVPDILDGVKNGVDMFDCVLPTRNARNGQVFTSLGKINLRNEKWKSSDVPIDPHCGCKVCKRYSIGYIRHLHHVGELTAFSLSTYHNLYFMKNFLSEIRKSIQAGEFLKIYAKWKNLY
type: DOMAIN
name: tRNA_ribo_trans-like
description: tRNA-guanine(15) transglycosylase-like

phrase: TRARTGILNLNGVKLETPVFMPVGTRGVVKTISADDLEELEYSLILGNTYHLYLRPGTAVLERFGGLKKFSTWKRALLTDSGGYQVFSLNSLFKYEQDGVRFQSHIDGSRHYFTPNSVIDIQRTIGSDIMMVLDDCAPFDSSQERLRQSLDRTHRWAEMSVEYWEKNKNSSHLFGIFQGGIDLGLRLESLQKIVSLPFDGIAIGGLSVGEPRKDFIRILEGVSAYTDRSRPLYLMGVGTVPDILDGVKNGVDMFDCVLPTRNARNGQVFTSLGKINLRNEKWKSSDVPIDPHCGCKVCKRYSIGYIRHLHHVGELTAFSLSTYHNLYFMKNFLSEIRKSIQAGEFLKIYAKWKNL
type: DOMAIN
name: tRNA_ribo_trans-like
description: tRNA-guanine(15) transglycosylase-like
Protein sequence:
MNAKKLTRGPLLWIVLPILVLLFALNLLRGSGVQTIDTSQGLELLRGDTVEQAQITDGYQRVNLTLTENFVPAEGEDKGTSVQFYYATPQADEVAELIRDADPEGGYNSVVPSTPWWSTLLMTMLTLVLIVAVFWFFLSRMQGGNSRMMNFGKSKARQVNVENPEVTFADVAGVDEAVEELVEIKEFLSEPAKFQAVGAKIPKGVLLYGPPGTGKTLIARAVAGEAGVPFYSISGSDFVEMFVGVGASRVRDLFEQAKTNSPAIIFVDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFEAHTNVILIAATNRPDILDPALLRPGRFDRQIAVEAPDLQGRLAILRVHAKGKPMTGDVDLEVVARRTPGFSGADLANVLNEAALLTARSNAQLVDNRALDEAIDRVIAGPQKRTRVMNVKERKLTAYHEGGHALVAAALRYTDPVTKVTILPRGRALGYTMVMPIEDKYSTTRNELLDQLAYAMGGRVAEELVFHDPTTGASNDIEKATATARKMVTQFGMSERVGALRLGQADGEVFLGRDYGHQREYSEEIAGVVDEEVRRLIEAAHDEAWEILTTYRDVLDQLVLELLERETLNHDELAEVFTAITKRDPRPVWLSSNRRGVSDRPPVSTPAEIAAGEGDMLPQDQAAAANDDHPATEVHEVPPEEPVRADRDGEPLA

Annotated regions:
phrase: PLLWIVLPILVLLFALNLLRGSGVQTIDTSQGLELLRGDTVEQAQITDGYQRVNLTLTENFVPAEGEDKGTSVQFYYATPQADEVAELIRDADPEGGYNSVV
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular

phrase: VILIAATNRPDILDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: VLLYGPPGTGKTLIARAVAGEAGVPFYSISGSDFVEMFVGVGASRVRDLFEQAKTNSPAIIFVDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFEAHTNVILIAATNRPDILDPALLRPGRFDRQIAV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: DVDLEVVARRTPGFSGADLANVLNEAALLTARSNAQLVDNRA
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: IPKGVLLYGPPGTGKTLIARAVAGEAGVPFYSISGSDFVEMFVGVGASRVRDLFEQAKTNSPAIIFVDEIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFEAHTNVILIAATNRPDILDPALLRPGRFDRQIAVEAP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: RVMNVKERKLTAYHEGGHALVAAALRYTDPVTKVTILPRGRALGYTMVMPIEDKYSTTRNELLDQLAYAMGGRVAEELVFHDPTTGASNDIEKATATARKMVTQFGMSERVGALRLGQADGEVFLGRDYGHQREYSEEIAGVVDEEVRRLIEAAHDEAWEILTTYRDVLDQLVLELLERETLNHDELAE
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41
Protein sequence:
MQYLNDIKSLNLEELKVELKAEFKDIFAFRAEQIYSWLHEQNVESFDEMTNLSKELRENLKLKYEIRNCEIEQKLESQLDETKKYLFKLNDGEFIESVLMKYKYGYTVCISTQVGCSMKCTFCASTIDGCKRNLTPSEMLSQVYKIEKDNENIKVSRVVLMGMGEPLDNFDNVLKFIELITDKKGKNLSNRNVTISTCGIVPKIYELIKLNPQFTLSISLHAPNDEIRNKLMPVNKKWNVDELLKACKEYTKATNKRISFEYVLIDTVNDDPEHAKELARKLKNILCYVNLIPVNEVTENNYIRSTDQKIQNFKKILDDAGITTTVRRTLGKDIEASCGQLRRTR

Annotated regions:
phrase: ISTQVGCSMKCTFCASTIDGCKRNLTPSEMLSQVYKIEKDNENIKVSRVVLMGMGEPLDNFDNVLKFIELITDKKGKNLSNRNVTISTCGIVPKIYELIKLNPQFTLSISLHAPNDEIRNKLMPVNKKWNVDELLKACKEYTKATNKRISFEYVLIDTVNDDPEHAK
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: YTVCISTQVGCSMKCTFCASTIDGCKRNLTPSEMLSQVYKIEKDNENIKVSRVVLMGMGEPLDNFDNVLKFIELITDKKGKNLSNRNVTISTCGIVPKIYELIKLNPQFTLSISLHAPNDEIRNKLMPVNKKWNVDELLKACKEYTKATNKRISFEYVLIDTVNDDPEHAKELARKLKNILCYVNLIPVNEVTENNYIRSTDQKIQNFK
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: AFRAEQIYSWLHEQNVESFDEMTNLSKELRENLKLKYE
type: DOMAIN
name: RlmN_N
description: Dual-specificity RNA methyltransferase RlmN, N-terminal domain

phrase: YKYGYTVCISTQVGCSMKCTFCASTIDGCKRNLTPSEMLSQVYKIEKDNENIKVSRVVLMGMGEPLDNFDNVLKFIELITDKKGKNLSNRNVTISTCGIVPKIYELIKLNPQFTLSISLHAPNDEIRNKLMPVNKKWNVDELLKACKEYTKATNKRISFEYVLIDTVNDDPEHAKELARKLKNILCYVNLIPVNEVTENNYIRSTDQKIQNFKKILDDAGITTTVRRTLGK
type: DOMAIN
name: rSAM
description: Radical SAM
Protein sequence:
MGNARNIAFWAVLFLLVLALFNLFSGGQSSLNARSVSYSDFVEQVESGEVSTVTLDGERVLFRGADGQDYSTVRPDEGGELTDRLLANDVTINAKPQEQSGFTTILMTFLPFLLLIGVWIYFMNRMQGGGKGGAMGFGKSKAKLLTEKHGRVTFDDVAGIDEAKDDLEEIVEFLRNPQKFSRLGGKIPKGALLVGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRSRGVGYGGGNDEREQTLNQLLVEMDGFEANEGIIIVAATNRPDVLDPALLRPGRFDRQVQVPNPDIKGREKILGVHARKVPLGPNVDLRIIARGTPGFSGADLANLVNEAALMAARVGRRFVTMDDFENAKDKVMMGAERRSMVMTEDEKKLTAYHEAGHAVVGLNVPQHDPVHKATIIPRGRALGLVLSLPERDQLSVSYTKYTSKIAMAMGGRVAEELKFGKENVTSGAASDIQQVTKIARAMITQFGFDDEIGYIDYANEQQSYLGGYSGGKDHSAATQRLIDEKVRALVDEGYQTAKRILTEKRDEWERLAQGLLEYETLTGPEITKVINGEPLNRGDDDDTPDQGNTSSIASIPKTKPKAKPDGGLEPEPT

Annotated regions:
phrase: LLVGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRSRGVGYGGGNDEREQTLNQLLVEMDGFEANEGIIIVAATNRPDVLDPALLRPGRFDRQVQV
type: DOMAIN
name: ATPase_AAA_core
description: ATPase, AAA-type, core

phrase: MVMTEDEKKLTAYHEAGHAVVGLNVPQHDPVHKATIIPRGRALGLVLSLPERDQLSVSYTKYTSKIAMAMGGRVAEELKFGKENVTSGAASDIQQVTKIARAMITQFGFDDEIGYIDYANEQQSYLGGYSGGKDHSAATQRLIDEKVRALVDEGYQTAKRILTEKRDEWERLAQGLLEYETLTGPEITK
type: DOMAIN
name: Peptidase_M41
description: Peptidase M41

phrase: IIIVAATNRPDVLDPALL
type: CONSERVED_SITE
name: ATPase_AAA_CS
description: ATPase, AAA-type, conserved site

phrase: AFWAVLFLLVLALFNLFSGGQSSLNARSVSYSDFVEQVESGEVSTVTLDGERVLFRGADGQDYSTVRPDEGGELTDRLLANDVTINAKP
type: DOMAIN
name: Pept_M41_FtsH_extracell
description: Peptidase M41, FtsH extracellular

phrase: NVDLRIIARGTPGFSGADLANLVNEAALMAARVGRRFVTMDDF
type: DOMAIN
name: AAA_lid_3
description: AAA ATPase, AAA+ lid domain

phrase: IPKGALLVGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIVFIDEIDAVGRSRGVGYGGGNDEREQTLNQLLVEMDGFEANEGIIIVAATNRPDVLDPALLRPGRFDRQVQVPNP
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain
Protein sequence:
MASSCPCGANRTYQQCCEIAHNNHADVKTPEQLMRSRYSAHVLGLVDYVVKTYHPSCNAEEQREGIAQSIDSDWCKLEVVKAEAGSHENEGFVEFNAYFNEDGQRYCLSERSRFVKENGLWYYIDGTFPEEESEQDPRLNQSISSLKVGRNDPCICGSGKKFKKCCG

Annotated regions:
phrase: TPEQLMRSRYSAHVLGLVDYVVKTYHPSCNAEEQREGIAQSIDSDWCKLEVVKAEAGSHENEGFVEFNAYFNEDGQRYCLSERSRFVKENGLWYYID
type: DOMAIN
name: YchJ-like_M
description: YchJ-like, middle NTF2-like domain

phrase: SSCPCGANRTYQQCC
type: CONSERVED_SITE
name: SEC_C_motif
description: SEC-C motif

phrase: RNDPCICGSGKKFKKCC
type: CONSERVED_SITE
name: SEC_C_motif
description: SEC-C motif
Protein sequence:
MNLMLITFNEFKTGISLNDTRAEHLVKILKLKDNDKFKFGILGEKNIYHCIYKKDKKLFFKKIFKVGESNKLKKLYVLIGMIRPIVAKRIIKELASIGTYKIIFFNTELTEKSYLNSKIFKNNDCEKHLIAGAMQGKITYLPKIKIIKNLKESLKYIQQENFEIKILLEKNSEKNLIDIEQINNAVIIVGPERGFTEKEKQLIAQYNFSPYSISTNTLRTETATIAASIITASKLINM

Annotated regions:
phrase: KLKKLYVLIGMIRPIVAKRIIKELASIGTYKIIFFNTELTEKSYLNSKIFKNNDCEKHLIAGAMQGKITYLPKIKIIKNLKESLKYIQQENFEIKILLEKNSEKNLIDIEQINNAVIIVGPERGFTEKEKQLIAQYNFSPYSISTNTLRTETATIAAS
type: DOMAIN
name: RsmE_MTase_dom
description: Ribosomal RNA small subunit methyltransferase E, methyltransferase domain

phrase: LNDTRAEHLVKILKLKDNDKFKFGILGEKNIYHCIYKKDKKLFFK
type: DOMAIN
name: RsmE_PUA-like
description: Ribosomal RNA small subunit methyltransferase E, PUA-like domain

phrase: LYVLIGMIRPIVAKRIIKELASIGTYKIIFFNTELTEKSYLNSKIFKNNDCEKHLIAGAMQGKITYLPKIKIIKNLKESLKYIQQENFEIKILLEKNSEKNLIDIEQINNAVIIVGPERGFTEKEKQLIAQYNFSPYSISTNTLRTETATIA
type: DOMAIN
name: RsmE_MTase_dom
description: Ribosomal RNA small subunit methyltransferase E, methyltransferase domain
Protein sequence:
MEKVLVFGHKNPDTDAICSAIAYAELKKELGMNAEPVRLGEISGETQFALDYFKVEGPRFVETVASEVDNVILVDHNERQQSANDIESVRVLEVIDHHRIANFETSDPIYYRCEPVGCTATILNKMYKENGVTIRKEVAGLMLSAIISDSLLFKSPTCTEQDVAAARELAEIAGVDADSYGLEMLKAGADLSGKTMEQLISLDAKEFQMGNAKVEIAQVNAVDTNDVLVHQAELEKVISAVVEEKGLDLFLFVVTDILTNDSVGLAIGKAANVVEKAYNVSLENNTATLKGVVSRKKQIVPVLTEAFQA

Annotated regions:
phrase: EMLKAGADLSGKTMEQLISLDAKEFQMGNAKVEIAQVNAVDTNDVLVHQAELEKVISAVVEEKGLDLFLFVVTDILTNDSVGLAIGKAANVVEKAYNVSLENNTATLKGVVSRKKQIVPVLTE
type: DOMAIN
name: DHHA2
description: DHHA2 domain

phrase: KVLVFGHKNPDTDAICSAIAYAELKKELGMNAEPVRLGEISGETQFALDYFKVEGPRFVETVASEVDNVILVDHNERQQSANDIESVRVLEVIDHHRIANFETSDPIYYRCEPVGCTATILNKMYKENGVTIRKEVAGLMLSA
type: DOMAIN
name: DDH_dom
description: DDH domain

phrase: GLEMLKAGADLSGKTMEQLISLDAKEFQMGNAKVEIAQVNAVDTNDVLVHQAELEKVISAVVEEKGLDLFLFVVTDILTNDSVGLAIGKAANVVEKAYNVSLENNTATLKGVVSRKKQIVPVLTEA
type: DOMAIN
name: DHHA2
description: DHHA2 domain
Protein sequence:
MDNTSSVPWASAASVTCLSLDAKCHSSSAKSAASSISASPETQAMRHIAHTQRCLSRLTSLVALLLIVLPMTFSPAHSCGPGRGLGRHRARNLYPLVLKQTIPNLSEYTNSASGPLEGVIRRDSPKFKDLVPNYNRDILFRDEEGTGADRLMSKRCREKLNLLAYSVMNEWPGIRLLVTESWDEDYHHGQESLHYEGRAVTIATSDRDQSKYGMLARLAVEAGFDWVSYVSRRHIYCSVKSDSSISSHVHGCFTPESTALLENGVRKPLGELSIGDRVLSMTANGQAVYSEVILFMDRNLEQMQNFVQLHTDGEAVLTVTPAHLVSVWQAESQKLTFVFADRVEEKNQVLVRDVETGELRPQRVVKVGSVRSKGVVAPLTREGTIVVNSVAASCYAVINSQSLAHWGLAPMRLLSTLEAWLPAKEQLHSSPKVVTTAEQQNGIHWYANALYKVKDYVLPQSWRHD

Annotated regions:
phrase: HGCFTPESTALLENGVRKPLGELSIGDRVLSMTANGQAVYSEVILFMDRNLEQMQNFVQLHTDGEAVLTVTPAHLVSVWQAESQKLTFVFADRVEEKNQVLVR
type: DOMAIN
name: Hint_dom_N
description: Hint domain N-terminal

phrase: KSDSSISSHVHGCFTPESTALLENGVRKPLGELSIGDRVLSMTANGQAVYSEVILFMDRNLEQMQNFVQLHTDGEAVLTVTPAHLVSVWQAESQKLTFVFADRVEEKNQVLVRDVETGELRPQRVVKVGSVRSKGVVAPLTREGTIVVNSVAASCYAVINSQSLAHWGLAPMRLLSTLEAWLPAKEQLHSSPKVVTTAEQQNGIHWYANALYKVKDYVL
type: DOMAIN
name: Hedgehog_Hint
description: Hedgehog protein, Hint domain

phrase: TGELRPQRVVKVGSVRSKGVVAPLTREGTIVVNSVAASCYAVIN
type: DOMAIN
name: Hint_dom_C
description: Hint domain C-terminal

phrase: CGPGRGLGRHRARNLYPLVLKQTIPNLSEYTNSASGPLEGVIRRDSPKFKDLVPNYNRDILFRDEEGTGADRLMSKRCREKLNLLAYSVMNEWPGIRLLVTESWDEDYHHGQESLHYEGRAVTIATSDRDQSKYGMLARLAVEAGFDWVSYVSRRHIYC
type: DOMAIN
name: Hedgehog_signalling_dom
description: Hedgehog, N-terminal signalling domain

phrase: CFTPESTALLENGVRKPLGELSIGDRVLSMTANGQAVYSEVILFMDRNLEQMQNFVQLHTDGEAVLTVTPAHLVS
type: PTM
name: Intein_N
description: Intein N-terminal splicing region
Protein sequence:
MRLVIAQCTVDYVGRLTAHLPSARRLLLFKADGSVSVHADDRAYKPLNWMSPPCWLTEEPGGDSPVWVVTNKGGEQLRISVEEIEHDSSHELGVDPGLVKDGVEAHLQVLLAEHVQLLGEGYTLVRREYMTAIGPVDLLCRDESGGAVAVEIKRRGEIDGVEQLTRYLELLNRDSVLAPVKGVFAAQQIKPQARTLATDRGIRCVTLDYDKMRGMDSDEYRLF

Annotated regions:
phrase: VEAHLQVLLAEHVQLLGEGYTLVRREYMTAIGPVDLLCRDESGGAVAVEIKRRGEIDGVEQLTRYLELLNRDSVLAPVKGVFAAQQIKPQARTLATDRGIRCVTLDYDKMRGMDSDEYRL
type: DOMAIN
name: NucS_C
description: Endonuclease NucS, C-terminal domain

phrase: RLVIAQCTVDYVGRLTAHLPSARRLLLFKADGSVSVHADDRAYKPLNWMSPPCWLTEEPGGDSPVWVVTNKGGEQLRISVEEIEHDSSHELGVD
type: DOMAIN
name: NucS_N
description: Endonuclease NucS, N-terminal PH-like domain
Protein sequence:
MKVAVIGGGPSGLVTLKYLLAAHHFQPVDPIEVQLFESEDRVGGTFSYRTYDRAELVSSAQLTTFSDYRWHDKSVDYLSAAEYVEYLEGYCDRFGLWPHIRLSTQVEKVERTGKGKHRITVSHDGQTSTWDCDAVAVCSGLHVKPNIPSIPGLDRVPVVFHSSEYKHVRQLGQNTNVMVLGTGETGMDIAYFSVTADSTKSTTVCHRNGFVIGPKRLPEIKLFGRVTSKTPGKALPVDLSRPYLFVNSYVHRKVRGTLQTTLSRWTVKAGSWLVTGTTRGFDQWVGSLPKDKYDESHYFYCKSTKAMPYISAPYRSHSWVHRLRSSIIQAVLPDTGSRKIDLAPWPEYIDEDGVVHFEKNSHPDSKVLLQERRFRPDVLVLATGYTQSFPFLGSDYCTPDHADQRGIWRTGDESVGYIGFVRPSFGAIPPLAEMQVQVWVLNLINRLPGPLVADDSYRLFSNPSGRIEYGVDHDMFAHRLALDIGAAPSFFQALAHGWQVTVFWAMGGTLNTKFRLVGPWAWSGAPRIICDELLDTVTGRRSTIELLTQLIMTAIVCGIPSILLFLADLLVALSIRIYQAISVVSSRPSKGDSAVTENRG

Annotated regions:
Protein sequence:
MNYTGKKILVLGMGKTGISMVKWLSRLGAQLSVADTRTSPPNLELISRIVPGEAIFCGPLKEELFQGIDAIAISPGVAVAEPLVQAALQQGVPVIGDIELFAVALDQYAPPGTKILAITGSNGKTTVTSMVGEMVKNAGWDVEVAGNIGPAALDALMQRMDANKWPHLWALELSSFQLETTSSLRPDAATVLNLSEDHLDRYDSIEEYAAAKARIFSRPHNNGCVQILNRDDARVYAMADKNSKQVTFGLSAPVSDEEFGLLPGGSDVWLAQGSTHLLKTSELAVAGLHNAANALAALALCRAVDLPFEPLLHALRTFRGLPHRMQKVAEFNGVTFYDDSKSTNIGSAVAALNGFRKNVILIAGGDGKGQDFSPLEQPVSKHVRSVVLLGRDADKVAQAIQASNVPIHRVTTMDEAVQVSFLLAEHGDVVLLSPACASLDMFNNYIHRAEVFTAAVRLIERKFVLTAQTCH

Annotated regions:
phrase: HRMQKVAEFNGVTFYDDSKSTNIGSAVAALNGFRKNVILIAGGDGKGQDFSPLEQPVSKHVRSVVLLGRDADKVAQAIQASNVPIHRVTTMDEAVQVSFLLAEHGDVVLLSPA
type: DOMAIN
name: Mur_ligase_C
description: Mur ligase, C-terminal

phrase: ITGSNGKTTVTSMVGEMVKNAGWDVEVAGNIGPAALDALMQRMDANKWPHLWALELSSFQLETTSSLRPDAATVLNLSEDHLDRYDSIEEYAAAKARIFSRPHNNGCVQILNRDDARVYAMADKNSKQVTFGLSAPVSDEEFGLLPGGSDVWLAQGSTHLLKTSELAVAGLHNAANALAALA
type: DOMAIN
name: Mur_ligase_cen
description: Mur ligase, central
Protein sequence:
MNKTVLNPLNIRWLGKVSYTDALALQNALFEEGSENHLLLLEHQHVFTLGVRGEKENILVDPSTMGAELVKTNRGGDVTYHGPGQLVGYPILSLPGKRGGGMADTVEYVRSVEDLIISALGQLGLPNCGRLQKYPGVWVDPNKRDARKIAAVGVRLTRGRTMHGFALNVKPDMSYFDAIVPCGIKDKSVTSLSEEGLEISMLEVVNTVSELATERWGSGQSRRMDVSWRTSQNELSPFSRGKGPGGIPKVNQNIEELDPNKRXVTIGRKSAXEKRAEVAIERKPDWIRVKADMGPKYRELKKSMRTLELTTVCEEAGCPNIFECWGQGTATFMALGERCTRACGFCLVDTRKPEKIDAGEPKRIATAVKQMGLEYAVITMVARDDLTDGGASHITEIIKEVRSANPGTKVEVLISDLKGNPDDLQKIFSAKPDVLNHNIETIPRLQRQVRPSASYARSLAVLAHAKRAGMVVKSSIMVGLGESEEEXRDTLKDLKEIGVDIVTIGQYLRPTTNHLPVQRWWTPKEFSELKMFGEAQGIPHXESSPLTXSSYHAKDAETTAMSKVVSVTSGSSS

Annotated regions:
phrase: EGSENHLLLLEHQHVFTLGVRGEKENILVDPSTMGAELVKTNRGGDVTYHGPGQLVGYPILSLPGKRGGGMADTVEYVRSVEDLIISALGQLGLPNCGRLQKYPGVWVDPNKRDARKIAAVGVRLTRGRTMHGFALNVKPDMSYFDAIVPCGIKDKSVTSLSEEGLEISMLEVVNTVSELATERWGSG
type: DOMAIN
name: BPL_LPL_catalytic
description: Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain

phrase: WGQGTATFMALGERCTRACGFCLVDTRKPEKIDAGEPKRIATAVKQMGLEYAVITMVARDDLTDGGASHITEIIKEVRSANPGTKVEVLISDLKGNPDDLQKIFSAKPDVLNHNIETIPRLQRQVRPSASYARSLAVLAHAKRAGMVVKSSIMVGLGESEEEXRDTLKDLKEIGVDIVTIGQYLRPTTNHLPVQRWWTPKEFSELKMFGEAQGI
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: TATFMALGERCTRACGFCLVDTRKPEKIDAGEPKRIATAVKQMGLEYAVITMVARDDLTDGGASHITEIIKEVRSANPGTKVEVLISDLKGNPDDLQKIFSAKPDVLNHNIETIPRLQRQVRPSASYARSLAVLAHAKRAGMVVKSSIMVGLGESEEEXRDTLKDLKEIGVDIVTIGQYLRPTTNHLPVQRWWTPKEFSELKMFG
type: DOMAIN
name: Elp3/MiaA/NifB-like_rSAM
description: Elp3/MiaA/NifB-like, radical SAM core domain

phrase: YTDALALQNALFEEGSENHLLLLEHQHVFTLGVRGEKENILVDPSTMGAELVKTNRGGDVTYHGPGQLVGYPILSLPGKRGGGMADTVEYVRSVEDLIISALGQLGLPNCGRLQKYPGVWVDPNKRDARKIAAVGVRLTRGRTMHGFALNVKPDMSYFDAIVPCGIKDKSVTSLSEEGLEISMLEVVNTV
type: DOMAIN
name: BPL_LPL_catalytic
description: Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain

phrase: GERCTRACGFCLVDTRKPEKIDAGEPKRIATAVKQMGLEYAVITMVARDDLTDGGASHITEIIKEVRSANPGTKVEVLISDLKGNPDDLQKIFSAKPDVLNHNIETIPRLQRQVRPSASYARSLAVLAHAKRAGMVVKSSIMVGLGESEEEXRDTLKD
type: DOMAIN
name: rSAM
description: Radical SAM

phrase: EKRAEVAIERKPDWIRVKADMGPKYRELKKSMRTLELTTVCEEAG
type: DOMAIN
name: LIAS_N
description: Lipoyl synthase, N-terminal

phrase: RGGDVTYHGPGQLVG
type: CONSERVED_SITE
name: Octanoyltransferase_CS
description: Octanoyltransferase, conserved site
Protein sequence:
MQQTKKLTHSDITIAVMSGPFLQRGEPALVSKWYRTKMALACGVDLVVELPYAFSTQKAETFANGAISILNALHVSEICFGSEDGQIENFYNTISVQKNEEETFNRLVKQFMNAGNSYAKATSEAFLHILSSEKNIDMSQPNNILGFQYIKAILMQNSSMQAQTIKRFASHYHDETFNDQHIASATSIRKQLFSENSSFTEIEPFIPKATASLLASYKQNYGTLHNWEQYFSFFKYKLMTMSPEDLRHIYEIEEGLEHRILSKIQTSSSFHSFMEALKTKRYTWTRLQRACTHILTNTTKEEIHCANIEQHAPYIRLLGMSQKGQTYLSKNKKKIELPILTHTKTFDHPTLHIDRKANSVYFSIMQEPLRAQLLKQDATHHPIRYDETTAKFL

Annotated regions:
Protein sequence:
MSEEDKAKKLENLLKLLQLNNDDTSKFTQEQKKAMKDHKFWRTQPVKDFDEKVVEEGPIDKPKTPEDISDKPLPLLSSFEWCSIDVDNKKQLEDVFVLLNENYVEDRDAGFRFNYTKEFFNWALKSPGWKKDWHIGVRVKETQKLVAFISAIPVTLGVRGKQVPSVEINFLCVHKQLRSKRLTPVLIKEITRRVNKCDIWHALYTAGIVLPAPVSTCRYTHRPLNWKKLYEVDFTGLPDGHTEEDMIAENALPAKTKTAGLRKLKKEDIDQVFELFKRYQSRFELIQIFTKEEFEHNFIGEESLPLDKQVIFSYVVEQPDGKITDFFSFYSLPFTILNNTKYKDLGIGYLYYYATDADFQFKDRFDPKATKALKTRLCELIYDACILAKNANMDVFNALTSQDNTLFLDDLKFGPGDGFLNFYLFNYRAKPITGGLNPDNSNDIKRRSNVGVVML

Annotated regions:
phrase: EINFLCVH
type: CONSERVED_SITE
name: NMT_CS
description: Glycylpeptide N-tetradecanoyltransferase, conserved site

phrase: EVDFTGLPDGHTEEDMIAENALPAKTKTAGLRKLKKEDIDQVFELFKRYQSRFELIQIFTKEEFEHNFIGEESLPLDKQVIFSYVVEQPDGKITDFFSFYSLPFTILNNTKYKDLGIGYLYYYATDADFQFKDRFDPKATKALKTRLCELIYDACILAKNANMDVFNALTSQDNTLFLDDLKFGPGDGFLNFYLFNYRAKPITGGLNPDNSNDIKRRSNVGV
type: DOMAIN
name: NMT_C
description: Glycylpeptide N-tetradecanoyltransferase, C-terminal

phrase: KFGPGD
type: CONSERVED_SITE
name: NMT_CS
description: Glycylpeptide N-tetradecanoyltransferase, conserved site

phrase: PIDKPKTPEDISDKPLPLLSSFEWCSIDVDNKKQLEDVFVLLNENYVEDRDAGFRFNYTKEFFNWALKSPGWKKDWHIGVRVKETQKLVAFISAIPVTLGVRGKQVPSVEINFLCVHKQLRSKRLTPVLIKEITRRVNKCDIWHALYTAGIVLPAPVST
type: DOMAIN
name: NMT_N
description: Glycylpeptide N-tetradecanoyltransferase, N-terminal
Protein sequence:
MELIEKHASFGGWQNVYRHYSASLKCEMNVGVYLPPKAAGEKLPVLYWLSGLTCNEQNFITKSGVQRYAAEHNIIVVAPDTSPRGSHVADADRYDLGQGAGFYLNATQAPWNEHYKMYDYIRNELPDLVMNHFPATAKKSISGHSMGGLGALVLALRNPDEYVSVSAFSPIVSPSQVPWGQQAFAAYLGENKEAWLDYHPVSLISQGQRVAEIMVDQGLSDDFYAEQLRTQNLEKICQEMNIKTLIRYHEGYDHSYYFVSSFIGEHIAYHANKLNMR

Annotated regions:
Protein sequence:
MNDLRMYNVLVRPLVTEKSTMQLEKGNQISFAVATWANKPQIKKAIETIYSVKVEAVQVSNAKGKTKRFGKLEGKRKDWKRAVVRLQEGQSIDLFDQGA

Annotated regions:
phrase: KRAVVRLQEGQSIDL
type: CONSERVED_SITE
name: Ribosomal_uL23_CS
description: Large ribosomal subunit protein uL23, conserved site
Protein sequence:
MHRSLHIRLCLLAALSGESVFLLGPPGIAKSLIARRLKFAFRHARAFEYLMTRFSTPEEVFGPLSIQALKEEGRYQRMTGGYLPEAEIVFLDEIWKAGPAILNTLLTAINERRFRNGDREDSIPMRLLVTASNELPDADSSLEALYDRMLIRLWLDRVQEKQNFRSLLISRQNENHNPVAENLSITDEEFHQWQPLIDKITLPDHCFELIFQLRQRLSALEHAPYVSDRRWKKALRLLQASAFFSGRDEITPIDLILLKDCLWHDLNSFKLLQQQLEQLLTEQGYQQQSLLMKLQDINSKWLQHQQQQSDHQALTVVKQSGMFSRKAQYALPDNLTDSTLTLLLQKPLNLHDIQVNHLQVDKEALAQWLNKGGALRAKLNGVGYAQSIDAEIDDQLHIIILDVSRQPSTLSLPGATTTSVPPELLLALTKLESTLAEQRRLFSQHQPCLFTPSSWLAKIEASLLQVVEQLQFQQIQFQQIQFQQRKFQQQKHSGH

Annotated regions:
phrase: FELIFQLRQRLSALEHAPYVSDRRWKKALRLLQASAFFSGRDEITPIDLILLKDCLWHDLNSFKLLQ
type: DOMAIN
name: RavA-like_AAA_lid
description: ATPase RavA-like, AAA lid domain

phrase: QALTVVKQSGMFSRKAQYALPDNLTDSTLTLLLQKPLNLHDIQVNHLQVDKEALAQWLNKGGALRAKLNGVGYAQSIDAEIDDQLHIIILDVSRQPSTLSLP
type: DOMAIN
name: RavA_LARA_dom
description: ATPase RavA, LARA domain

phrase: SGESVFLLGPPGIAKSLIARRLKFAFRHARAFEYLMTRFSTPEEVFGPLSIQALKEEGRYQRMTGGYLPEAEIVFLDEIWKAGPAILNTLLTAINERRFRNGDREDSIPMRLLVTASNELPDADSSLEALYDRMLIRLWLDRVQEKQNF
type: DOMAIN
name: AAA+_ATPase
description: AAA+ ATPase domain

phrase: IRLCLLAALSGESVFLLGPPGIAKSLIARRLKFAFRHARAFEYLMTRFSTPEEVFGPLSIQALKEEGRYQRMTGGYLPEAEIVFLDEIWKAGPAILNTLLTAINERRFRNGDREDSIPMRLLVTASNELPDADSSLEALYDRMLIRLWLDRVQEKQNFRSLLISRQNENHNPVAENLSITDEEFH
type: DOMAIN
name: MoxR
description: MoxR domain

phrase: PELLLALTKLESTLAEQRRLFSQHQPCLFTPSSWLAKIEASLLQVVEQLQFQ
type: DOMAIN
name: ATPase_RavA_C
description: ATPase, RavA, C-terminal
Protein sequence:
MAECSTLESLIEMGFSSTRAEKALTATGNQGIEPAMDWLVEHEDDPDIDEPSVVVPEGSSTDTADTTDTTDTTDTQGMDTSAERLPLTEEEKEKQTKRMMELVAQKQNEREEREKKERIEQEKQRRKHGQELSAIKQKMQEQEMQKAAEDRRREKQEEKMARERVREKIARDKADRARRFGGASSEPISPPAETSIPATTPSPSSPVQEPPTKKEYDQCRIQVRLLDGSALSQTFRAREQLAAVRLYVELNWPGGPPGPFSLLTSFPQRVFTEEDMEKPLQELGLVPTAVLIVAKK

Annotated regions:
phrase: MAECSTLESLIEMGFSSTRAEKALTATGNQGIEPAMDWLVE
type: DOMAIN
name: UBA
description: Ubiquitin-associated domain

phrase: KEYDQCRIQVRLLDGSALSQTFRAREQLAAVRLYVELNWPGGPPGPFSLLTSFPQRVFTEEDMEKPLQELGLVPTAVLIV
type: DOMAIN
name: UBX_dom
description: UBX domain

phrase: TLESLIEMGFSSTRAEKALTATGNQGIEPAMDWLVEHEDDPDID
type: DOMAIN
name: UBA
description: Ubiquitin-associated domain

phrase: PTKKEYDQCRIQVRLLDGSALSQTFRAREQLAAVRLYVELNWPGGPPGPFSLLTSFPQRVFTEEDMEKPLQELGLVPTAVLIVA
type: DOMAIN
name: UBX_dom
description: UBX domain

phrase: STLESLIEMGFSSTRAEKALTATGNQGIEPAMDWLVEHED
type: DOMAIN
name: UBA_UBXN1
description: UBXN1, UBA domain

phrase: ECSTLESLIEMGFSSTRAEKALTATGNQGIEPAMDWLV
type: DOMAIN
name: UBA
description: Ubiquitin-associated domain

phrase: KEYDQCRIQVRLLDGSALSQTFRAREQLAAVRLYVELNWPGGPPGPFSLLTSFPQRVFTEEDMEKPLQELGLVPTAVLI
type: DOMAIN
name: UBX_dom
description: UBX domain
Protein sequence:
MKMTVDFEECLKDSPRFRAALEEVEGDVAELELKLDKLVKLCIAMIDTGKAFCLANKQFMNGIRDLAQYSSNDAVVETSLTKFSDSLQEMINFHTILFDQTQRSIKAQLQNFVKEDLRKFKDAKKQFEKVSEEKENALAKNAQVQRNKQHEVEEATNILTATRKCFRHIALDYVLQINVLQSKRRSEILKSMLSFMYAHLAFFHQGYDLFSELGPYMKDLGAQLDRLVVDAAKEKREMEQKHSTIQQKDFSSDDSKLEYNVDAANGIVMEGYLFKRASNAFKTWNRRWFSIQNNQLVYQKKFKDNPTVVVEDLRLCTVKHCEDIERRFCFEVVSPTKSCMLQADSEKLRQAWIKAVQTSIATAYREKGDESEKLDKKSSPSTGSLDSGNESKEKLLKGESALQRVQCVPGNASCCDCGLADPRWASINLGITLCIECSGIHRSLGVHFSKVRSLTLDTWEPELLKLMCELGNDVINRVYEANVEKMGIKKPQPGQRQEKEAYIKAKYVERKFVDKYSVSSSPPEQEKKVVSKDSEEKRLSIPKLGPGDQVRTSIQSSVKSNDSGIQQSSDDGRESLPSTVSANSLYEPEGERQDSSVFLDSKHLNPGLQLYRASYEKNLPKMAEALAHGADVNWANSEENKATPLIQAVLGGSLVTCEFLLQNGANVNQRDVQGRGPLHHATVLGHTGQVCLFLKRGANQHATDEEGKDPLSIAVEAANADIVTLLRLARMNEEMRESEGLYGQPGDETYQDIFRDFSQMASNNPEKLNRFQQDSQKF

Annotated regions:
phrase: ALQRVQCVPGNASCCDCGLADPRWASINLGITLCIECSGIHRSLGVHFSKVRSLTLDTWEPELLKLMCELGNDVINRVYEANVEKMGIKKPQPGQRQEKEAYIKAKYVERKFVD
type: DOMAIN
name: ArfGAP_dom
description: Arf GTPase activating protein

phrase: VMEGYLFKRASNAFKTWNRRWFSIQNNQLVYQKKFKDNPTVVVEDLRLCTVKHCEDIERRFCFEVVSPTKSCMLQADSEKLRQAWIKAVQTS
type: DOMAIN
name: PH_domain
description: Pleckstrin homology domain

phrase: LYRASYEKNLPKMAEALAHGADVNWANSEENKATPLIQAVLGGSLVTCEFLLQNGANVNQRDVQGRGPLHHATVLGHTGQVCLFLKRGANQHAT
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: NASCCDCGLADPRWASINL
type: DOMAIN
name: ArfGAP_dom
description: Arf GTPase activating protein

phrase: GITLCIECSGIHRSLGV
type: DOMAIN
name: ArfGAP_dom
description: Arf GTPase activating protein

phrase: VRSLTLDTWEPELLKLMCELG
type: DOMAIN
name: ArfGAP_dom
description: Arf GTPase activating protein

phrase: VDFEECLKDSPRFRAALEEVEGDVAELELKLDKLVKLCIAMIDTGKAFCLANKQFMNGIRDLAQYSSNDAVVETSLTKFSDSLQEMINFHTILFDQTQRSIKAQLQNFVKEDLRKFKDAKKQFEKVSEEKENALAKNAQVQRNKQHEVEEATNILTATRKCFRHIALDYVLQINVLQSKRRSEILKSMLSFMYAHLAFFHQGYDLFSELGPYMKDLGAQLDRLVVDAAKEKRE
type: DOMAIN
name: BAR_dom
description: BAR domain

phrase: QGRGPLHHATVLGHTGQVCLFLKRGANQH
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: EGKDPLSIAVEAANADIVTLLRLARMNEE
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: NKATPLIQAVLGGSLVTCEFLLQNGANVN
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: ESALQRVQCVPGNASCCDCGLADPRWASINLGITLCIECSGIHRSLGVHFSKVRSLTLDTWEPELLKLMCELGNDVINRVYEANVEKMGIKKPQPGQRQEKEAYIKAKYVERKFVDKYSVS
type: DOMAIN
name: ArfGAP_dom
description: Arf GTPase activating protein

phrase: IVMEGYLFKRASNAFKTWNRRWFSIQNNQLVYQKKFKDNPTVVVEDLRLCTVKHCEDIERRFCFEVVSPTKSCMLQADSEKLRQAWIKAVQTSIAT
type: DOMAIN
name: PH_domain
description: Pleckstrin homology domain

phrase: ESALQRVQCVPGNASCCDCGLADPRWASINLGITLCIECSGIHRSLGVHFSKVRSLTLDTWEPELLKLMCELGNDVINRVYEANVEKMGIKKPQPGQRQEKEAYIKAKYVERKFVDKYSVS
type: DOMAIN
name: ArfGAP_dom
description: Arf GTPase activating protein

phrase: QGRGPLHHATVLGHTGQVCLFLKRGANQHATD
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: NKATPLIQAVLGGSLVTCEFLLQNGANVNQRD
type: REPEAT
name: Ankyrin_rpt
description: Ankyrin repeat

phrase: GIVMEGYLFKRASNAFKTWNRRWFSIQNNQLVYQKKFKDNPTVVVEDLRLCTVKHCEDIERRFCFEVVSPTKSCMLQADSEKLRQAWIKAVQTSI
type: DOMAIN
name: PH_domain
description: Pleckstrin homology domain
Protein sequence:
MVGELYRFITDFGVIEGYIIKEEPNYYLIKLKNGYNIGIKKSQIKEMENLNEKIKVGQFPKRKPKGIGNLGFIYTGGTIGSKVDYLTGGVSAIMDIEELLAIADLPYDIKIIDSPFVKFSEDLNPKDWVEIVKSIERTYKKGAEGIIVAHGTDTMHFSSAYAYYALENPIPIAFTGAQRSSDRASTDAVINLFASSIYANSNIGEVAIVMHETINDDTAIAIRGISARKMHSTRRDAFKSINEEPLARIYYPSGKLEIINKKYRKRSDKEMVAKPYLDTKGALIWVYPGFDPSILEYYRNYRGIIIAGTGMGHTSKELIPMLKELSKDLFIGITTQCIYGITHPYVYSRGRELSKFATYLQGTPEKNYVKLLYVLGKESDLDGIKKEMKRLP

Annotated regions:
phrase: GIIVAHGTDT
type: ACTIVE_SITE
name: Asparaginase/glutaminase_AS2
description: Asparaginase/glutaminase, active site 2

phrase: LIWVYPGFDPSILEYYRNYRGIIIAGTGMGHTSKELIPMLKELSKDLFIGITTQCIYGITHPYVYSRGRELSKFATYLQGTPEKNYVKLLYVLGKESDLDGIK
type: DOMAIN
name: Asparaginase_C
description: Asparaginase/glutaminase, C-terminal

phrase: FIYTGGTIGSKVDYLTGGVSAIMDIEELLAIADLPYDIKIIDSPFVKFSEDLNPKDWVEIVKSIERTYKKGAEGIIVAHGTDTMHFSSAYAYYALENPIPIAFTGAQRSSDRASTDAVINLFASSIYANSNIGEVAIVMHETINDDTAIAIRGISARKMHSTRRDAFKSINEEPLARIYYPSGKLE
type: DOMAIN
name: L-asparaginase_N
description: L-asparaginase, N-terminal
Protein sequence:
MRTEAEAAGPPLEPGDFVQLPVPVIQQLYHWDCGLACSRMVLRYLGQLDDSEFERALQKLQLTRSIWTIDLAYLMHHFGVRHRFCTQTLGVDKGYKNQSFYRKHFDTEETRVNQLFAQAKACKVLVEKCTVSVKDIQAHLAQGHVAIVLVNSGVLHCDLCSSPVKYCCFTPSGHHCFCRTPDYQGHFIVLRGYNRATGCIFYNNPAYADPGMCSTSISNFEEARTSYGTDEDILFVYLDS

Annotated regions: