Program: 65228
Project: 65228
Buggy source:
private Map getPropertiesFromJSON() throws JAXBException {
  Map props=new HashMap(getProperties());
  if (props != null) {
    Object bindingFilesObject=props.get(JAXBContextFactory.ECLIPSELINK_OXM_XML_KEY);
    if (bindingFilesObject != null) {
      JAXBContext jaxbContext=CompilerHelper.getXmlBindingsModelContext();
      Unmarshaller u=jaxbContext.createUnmarshaller();
      Marshaller jsonMarshaller=jaxbContext.createMarshaller();
      jsonMarshaller.setProperty(JAXBMarshaller.MEDIA_TYPE,"String_Node_Str");
      jsonMarshaller.setProperty(JAXBMarshaller.JSON_INCLUDE_ROOT,false);
      if (bindingFilesObject instanceof Map) {
        Map<String,Object> bindingFiles=(Map<String,Object>)bindingFilesObject;
        Iterator<String> keyIter=bindingFiles.keySet().iterator();
        while (keyIter.hasNext()) {
          String nextKey=keyIter.next();
          Object nextBindings=bindingFiles.get(nextKey);
          ;
          if (nextBindings instanceof List) {
            List nextList=(List)bindingFiles.get(nextKey);
            for (int i=0; i < nextList.size(); i++) {
              Object o=nextList.get(i);
              if (o instanceof Source) {
                Source nextSource=(Source)o;
                if (nextSource instanceof StreamSource) {
                  StreamSource ss=(StreamSource)nextSource;
                  StreamSource ss2=new StreamSource(ss.getInputStream());
                  Object unmarshalledFromXML=u.unmarshal(ss2);
                  StringWriter sw=new StringWriter();
                  StreamResult newResult=new StreamResult(sw);
                  jsonMarshaller.marshal(unmarshalledFromXML,newResult);
                  StreamSource newSource=new StreamSource(new StringReader(sw.toString()));
                  nextList.set(i,newSource);
                }
              }
            }
          }
 else           if (nextBindings instanceof Source) {
            Object unmarshalledFromXML=u.unmarshal((Source)nextBindings);
            StringWriter sw=new StringWriter();
            StreamResult newResult=new StreamResult(sw);
            jsonMarshaller.marshal(unmarshalledFromXML,newResult);
            StreamSource newSource=new StreamSource(new StringReader(sw.toString()));
            bindingFiles.put(nextKey,newSource);
          }
        }
      }
 else       if (bindingFilesObject instanceof List) {
        List bindingFilesList=(List)bindingFilesObject;
        for (int i=0; i < bindingFilesList.size(); i++) {
          Object next=bindingFilesList.get(i);
          Object unmarshalledFromXML=getXmlBindings(next);
          StringWriter sw=new StringWriter();
          StreamResult newResult=new StreamResult(sw);
          jsonMarshaller.marshal(unmarshalledFromXML,newResult);
          StreamSource newSource=new StreamSource(new StringReader(sw.toString()));
          bindingFilesList.set(i,newSource);
        }
        props.put(JAXBContextFactory.ECLIPSELINK_OXM_XML_KEY,bindingFilesList);
      }
 else {
        Object unmarshalledFromXML=getXmlBindings(bindingFilesObject);
        StringWriter sw=new StringWriter();
        StreamResult newResult=new StreamResult(sw);
        jsonMarshaller.marshal(unmarshalledFromXML,newResult);
        StreamSource newSource=new StreamSource(new StringReader(sw.toString()));
        props.put(JAXBContextFactory.ECLIPSELINK_OXM_XML_KEY,newSource);
      }
    }
  }
  return props;
}

Fixed version (ground truth):
private Map getPropertiesFromJSON() throws JAXBException {
  Map props=new HashMap(getProperties());
  if (props != null) {
    Object bindingFilesObject=props.get(JAXBContextFactory.ECLIPSELINK_OXM_XML_KEY);
    if (bindingFilesObject != null) {
      JAXBContext jaxbContext=CompilerHelper.getXmlBindingsModelContext();
      Unmarshaller u=jaxbContext.createUnmarshaller();
      Marshaller jsonMarshaller=jaxbContext.createMarshaller();
      jsonMarshaller.setProperty(MarshallerProperties.MEDIA_TYPE,"String_Node_Str");
      jsonMarshaller.setProperty(MarshallerProperties.JSON_INCLUDE_ROOT,false);
      if (bindingFilesObject instanceof Map) {
        Map<String,Object> bindingFiles=(Map<String,Object>)bindingFilesObject;
        Iterator<String> keyIter=bindingFiles.keySet().iterator();
        while (keyIter.hasNext()) {
          String nextKey=keyIter.next();
          Object nextBindings=bindingFiles.get(nextKey);
          ;
          if (nextBindings instanceof List) {
            List nextList=(List)bindingFiles.get(nextKey);
            for (int i=0; i < nextList.size(); i++) {
              Object o=nextList.get(i);
              if (o instanceof Source) {
                Source nextSource=(Source)o;
                if (nextSource instanceof StreamSource) {
                  StreamSource ss=(StreamSource)nextSource;
                  StreamSource ss2=new StreamSource(ss.getInputStream());
                  Object unmarshalledFromXML=u.unmarshal(ss2);
                  StringWriter sw=new StringWriter();
                  StreamResult newResult=new StreamResult(sw);
                  jsonMarshaller.marshal(unmarshalledFromXML,newResult);
                  StreamSource newSource=new StreamSource(new StringReader(sw.toString()));
                  nextList.set(i,newSource);
                }
              }
            }
          }
 else           if (nextBindings instanceof Source) {
            Object unmarshalledFromXML=u.unmarshal((Source)nextBindings);
            StringWriter sw=new StringWriter();
            StreamResult newResult=new StreamResult(sw);
            jsonMarshaller.marshal(unmarshalledFromXML,newResult);
            StreamSource newSource=new StreamSource(new StringReader(sw.toString()));
            bindingFiles.put(nextKey,newSource);
          }
        }
      }
 else       if (bindingFilesObject instanceof List) {
        List bindingFilesList=(List)bindingFilesObject;
        for (int i=0; i < bindingFilesList.size(); i++) {
          Object next=bindingFilesList.get(i);
          Object unmarshalledFromXML=getXmlBindings(next);
          StringWriter sw=new StringWriter();
          StreamResult newResult=new StreamResult(sw);
          jsonMarshaller.marshal(unmarshalledFromXML,newResult);
          StreamSource newSource=new StreamSource(new StringReader(sw.toString()));
          bindingFilesList.set(i,newSource);
        }
        props.put(JAXBContextFactory.ECLIPSELINK_OXM_XML_KEY,bindingFilesList);
      }
 else {
        Object unmarshalledFromXML=getXmlBindings(bindingFilesObject);
        StringWriter sw=new StringWriter();
        StreamResult newResult=new StreamResult(sw);
        jsonMarshaller.marshal(unmarshalledFromXML,newResult);
        StreamSource newSource=new StreamSource(new StringReader(sw.toString()));
        props.put(JAXBContextFactory.ECLIPSELINK_OXM_XML_KEY,newSource);
      }
    }
  }
  return props;
}