Program: 48179
Project: 48179
Buggy source:
public void setup(){
  GUIDefaults.initialize();
  MessageDialog dialog=new MessageDialog();
  dialog.setHeadline(lang.translationForKey("String_Node_Str"));
  try {
    tray=new AppTray(this);
    tray.beginSetup();
    env=new ClientEnv();
    TinyManagement management=new TinyManagement(env);
    env.setManagement(management);
    ifd=new IFD();
    ifd.addProtocol(ECardConstants.Protocol.PACE,new PACEProtocolFactory());
    env.setIFD(ifd);
    MessageDispatcher dispatcher=new MessageDispatcher(env);
    env.setDispatcher(dispatcher);
    ifd.setDispatcher(dispatcher);
    EstablishContext establishContext=new EstablishContext();
    EstablishContextResponse establishContextResponse=ifd.establishContext(establishContext);
    WSHelper.checkResult(establishContextResponse);
    contextHandle=ifd.establishContext(establishContext).getContextHandle();
    recognition=new CardRecognition(ifd,contextHandle);
    em=new EventManager(recognition,env,contextHandle);
    env.setEventManager(em);
    cardStates=new CardStateMap();
    SALStateCallback salCallback=new SALStateCallback(recognition,cardStates);
    em.registerAllEvents(salCallback);
    sal=new TinySAL(env,cardStates);
    sal.addProtocol(ECardConstants.Protocol.EAC_GENERIC,new EACGenericProtocolFactory());
    sal.addProtocol(ECardConstants.Protocol.EAC2,new EAC2ProtocolFactory());
    env.setSAL(sal);
    SwingUserConsent gui=new SwingUserConsent(new SwingDialogWrapper());
    sal.setGUI(gui);
    ifd.setGUI(gui);
    tray.endSetup(recognition);
    em.registerAllEvents(tray.status());
    em.initialize();
    try {
      HTTPBinding binding=new HTTPBinding(HTTPBinding.DEFAULT_PORT);
      ControlHandlers handler=new ControlHandlers();
      GenericTCTokenHandler genericTCTokenHandler=new GenericTCTokenHandler(cardStates,dispatcher,gui,recognition);
      EventHandler eventHandler=new EventHandler(em);
      ProtocolInfo pInfo=sal.getProtocolInfo();
      GenericStatusHandler genericStatusHandler=new GenericStatusHandler(cardStates,eventHandler,pInfo,recognition);
      GenericWaitForChangeHandler genericWaitHandler=new GenericWaitForChangeHandler(eventHandler);
      ControlHandler tcTokenHandler=new HttpTCTokenHandler(genericTCTokenHandler);
      ControlHandler statusHandler=new HttpStatusHandler(genericStatusHandler);
      ControlHandler waitHandler=new HttpWaitForChangeHandler(genericWaitHandler);
      handler.addControlHandler(tcTokenHandler);
      handler.addControlHandler(statusHandler);
      handler.addControlHandler(waitHandler);
      control=new ControlInterface(binding,handler);
      control.start();
    }
 catch (    BindException e) {
      dialog.setMessage(lang.translationForKey("String_Node_Str"));
      throw e;
    }
    String pluginsPath=FileUtils.getHomeConfigDir() + File.separator + "String_Node_Str"+ File.separator;
    Policy.setPolicy(new PluginPolicy(pluginsPath));
    System.setSecurityManager(new SecurityManager());
    pluginManager=new PluginManager(dispatcher,gui,recognition,cardStates,pluginsPath);
    pluginManager.addPlugin(new PINPlugin());
  }
 catch (  Exception e) {
    _logger.error(e.getMessage(),e);
    if (dialog.getMessage() == null || dialog.getMessage().isEmpty()) {
      dialog.setMessage(e.getMessage());
    }
    JOptionPane.showMessageDialog(null,dialog,"String_Node_Str",JOptionPane.PLAIN_MESSAGE);
    teardown();
  }
}

Fixed version (ground truth):
public void setup(){
  GUIDefaults.initialize();
  MessageDialog dialog=new MessageDialog();
  dialog.setHeadline(lang.translationForKey("String_Node_Str"));
  try {
    tray=new AppTray(this);
    tray.beginSetup();
    env=new ClientEnv();
    TinyManagement management=new TinyManagement(env);
    env.setManagement(management);
    ifd=new IFD();
    ifd.addProtocol(ECardConstants.Protocol.PACE,new PACEProtocolFactory());
    env.setIFD(ifd);
    MessageDispatcher dispatcher=new MessageDispatcher(env);
    env.setDispatcher(dispatcher);
    ifd.setDispatcher(dispatcher);
    EstablishContext establishContext=new EstablishContext();
    EstablishContextResponse establishContextResponse=ifd.establishContext(establishContext);
    WSHelper.checkResult(establishContextResponse);
    contextHandle=ifd.establishContext(establishContext).getContextHandle();
    recognition=new CardRecognition(ifd,contextHandle);
    em=new EventManager(recognition,env,contextHandle);
    env.setEventManager(em);
    cardStates=new CardStateMap();
    SALStateCallback salCallback=new SALStateCallback(recognition,cardStates);
    em.registerAllEvents(salCallback);
    sal=new TinySAL(env,cardStates);
    sal.addProtocol(ECardConstants.Protocol.EAC_GENERIC,new EACGenericProtocolFactory());
    sal.addProtocol(ECardConstants.Protocol.EAC2,new EAC2ProtocolFactory());
    env.setSAL(sal);
    SwingUserConsent gui=new SwingUserConsent(new SwingDialogWrapper());
    sal.setGUI(gui);
    ifd.setGUI(gui);
    recognition.setGUI(gui);
    tray.endSetup(recognition);
    em.registerAllEvents(tray.status());
    em.initialize();
    try {
      HTTPBinding binding=new HTTPBinding(HTTPBinding.DEFAULT_PORT);
      ControlHandlers handler=new ControlHandlers();
      GenericTCTokenHandler genericTCTokenHandler=new GenericTCTokenHandler(cardStates,dispatcher,gui,recognition);
      EventHandler eventHandler=new EventHandler(em);
      ProtocolInfo pInfo=sal.getProtocolInfo();
      GenericStatusHandler genericStatusHandler=new GenericStatusHandler(cardStates,eventHandler,pInfo,recognition);
      GenericWaitForChangeHandler genericWaitHandler=new GenericWaitForChangeHandler(eventHandler);
      ControlHandler tcTokenHandler=new HttpTCTokenHandler(genericTCTokenHandler);
      ControlHandler statusHandler=new HttpStatusHandler(genericStatusHandler);
      ControlHandler waitHandler=new HttpWaitForChangeHandler(genericWaitHandler);
      handler.addControlHandler(tcTokenHandler);
      handler.addControlHandler(statusHandler);
      handler.addControlHandler(waitHandler);
      control=new ControlInterface(binding,handler);
      control.start();
    }
 catch (    BindException e) {
      dialog.setMessage(lang.translationForKey("String_Node_Str"));
      throw e;
    }
    String pluginsPath=FileUtils.getHomeConfigDir() + File.separator + "String_Node_Str"+ File.separator;
    Policy.setPolicy(new PluginPolicy(pluginsPath));
    System.setSecurityManager(new SecurityManager());
    pluginManager=new PluginManager(dispatcher,gui,recognition,cardStates,pluginsPath);
    pluginManager.addPlugin(new PINPlugin());
  }
 catch (  Exception e) {
    _logger.error(e.getMessage(),e);
    if (dialog.getMessage() == null || dialog.getMessage().isEmpty()) {
      dialog.setMessage(e.getMessage());
    }
    JOptionPane.showMessageDialog(null,dialog,"String_Node_Str",JOptionPane.PLAIN_MESSAGE);
    teardown();
  }
}