Program: 175117
Project: 175117
Buggy source:
@SuppressWarnings("String_Node_Str") public boolean initialise(){
  try {
    this.imgName=super.manifestFile.getName();
    this.imgName=this.imgName.substring(0,this.imgName.lastIndexOf("String_Node_Str"));
    this.displayName=super.manifestFile.getName();
    if (group != null && !group.equalsIgnoreCase("String_Node_Str"))     this.displayName=this.displayName + "String_Node_Str" + group;
    h5file=new H5File(super.manifestFile.getAbsolutePath(),H5File.READ);
    imagedata=(H5ScalarDS)h5file.get(internalImage);
    extractQuickLook();
    List<Object> metadata=new ArrayList<Object>();
    metadata.addAll(h5file.get("String_Node_Str").getMetadata());
    if (imagedata == null)     return false;
    metadata.addAll(imagedata.getMetadata());
    long[] selected=imagedata.getSelectedDims();
    selected[0]=1;
    if (selected.length > 2)     selected[2]=2;
    xSize=(int)imagedata.getDims()[1];
    ySize=(int)imagedata.getDims()[0];
    stride=imagedata.getStride();
    dims=imagedata.getSelectedDims();
    starts=imagedata.getStartDims();
    setMetaWidth(xSize);
    setMetaHeight(ySize);
    bounds=new Rectangle(0,0,xSize,ySize);
    gcps=new ArrayList<Gcp>();
    for (    Object o : metadata) {
      Attribute a=(Attribute)o;
      if (a.getName().equals("String_Node_Str")) {
        double[] val=(double[])a.getValue();
        Gcp gcp=new Gcp();
        gcp.setXpix(0);
        gcp.setOriginalXpix(0.0);
        gcp.setYpix(ySize);
        gcp.setXgeo(val[1]);
        gcp.setYgeo(val[0]);
        gcps.add(gcp);
      }
 else       if (a.getName().equals("String_Node_Str")) {
        double[] val=(double[])a.getValue();
        Gcp gcp=new Gcp();
        gcp.setXpix(xSize);
        gcp.setOriginalXpix(new Double(xSize));
        gcp.setYpix(ySize);
        gcp.setXgeo(val[1]);
        gcp.setYgeo(val[0]);
        gcps.add(gcp);
      }
 else       if (a.getName().equals("String_Node_Str")) {
        double[] val=(double[])a.getValue();
        Gcp gcp=new Gcp();
        gcp.setXpix(0);
        gcp.setOriginalXpix(new Double(0));
        gcp.setYpix(0);
        gcp.setXgeo(val[1]);
        gcp.setYgeo(val[0]);
        gcps.add(gcp);
      }
 else       if (a.getName().equals("String_Node_Str")) {
        double[] val=(double[])a.getValue();
        Gcp gcp=new Gcp();
        gcp.setXpix(xSize);
        gcp.setOriginalXpix(new Double(xSize));
        gcp.setYpix(0);
        gcp.setXgeo(val[1]);
        gcp.setYgeo(val[0]);
        gcps.add(gcp);
      }
 else       if (a.getName().equals("String_Node_Str")) {
        String[] val=(String[])a.getValue();
        setTimeStampStart(val[0]);
      }
 else       if (a.getName().equals("String_Node_Str")) {
        String[] val=(String[])a.getValue();
        setTimeStampStop(val[0]);
      }
 else       if (a.getName().equals("String_Node_Str")) {
        double[] val=(double[])a.getValue();
        setENL(String.valueOf(val[0]));
      }
 else       if (a.getName().equals("String_Node_Str")) {
        double[] val=(double[])a.getValue();
        setRangeSpacing(new Float(val[0]));
        pixelsize[0]=getRangeSpacing();
      }
 else       if (a.getName().equals("String_Node_Str")) {
        double[] val=(double[])a.getValue();
        setIncidenceFar(new Float(val[0]));
      }
 else       if (a.getName().equals("String_Node_Str")) {
        double[] val=(double[])a.getValue();
        setIncidenceNear(new Float(val[0]));
      }
 else       if (a.getName().equals("String_Node_Str")) {
        double[] val=(double[])a.getValue();
        setAzimuthSpacing(new Float(val[0]));
        pixelsize[1]=getAzimuthSpacing();
      }
 else       if (a.getName().equals("String_Node_Str")) {
        String[] val=(String[])a.getValue();
        setLookDirection(val[0]);
      }
 else       if (a.getName().equals("String_Node_Str")) {
        String[] val=(String[])a.getValue();
        setOrbitDirection(val[0]);
      }
 else       if (a.getName().equals("String_Node_Str")) {
        String[] val=(String[])a.getValue();
        setProcessor(val[0]);
      }
 else       if (a.getName().equals("String_Node_Str")) {
        double[] val=(double[])a.getValue();
        setRadarWaveLenght(val[0]);
      }
 else       if (a.getName().equals("String_Node_Str")) {
        String[] val=(String[])a.getValue();
        setType(val[0]);
      }
 else       if (a.getName().equals("String_Node_Str")) {
        String[] val=(String[])a.getValue();
        setSatellite(val[0]);
      }
 else       if (a.getName().equals("String_Node_Str")) {
        double[] val=(double[])a.getValue();
        setSatelliteAltitude(val[0]);
      }
 else       if (a.getName().equals("String_Node_Str")) {
        String[] val=(String[])a.getValue();
        setPolarization(val[0]);
      }
 else       if (a.getName().equals("String_Node_Str")) {
        String[] val=(String[])a.getValue();
        setBeam(val[0]);
      }
 else       if (a.getName().equals("String_Node_Str")) {
        double[] val=(double[])a.getValue();
        setPRF(val[0]);
      }
 else       if (a.getName().equals("String_Node_Str")) {
        double[] val=(double[])a.getValue();
        setPRF(val[0]);
      }
      setSatelliteOrbitInclination(97.86);
      setRevolutionsPerday(14.8125);
    }
    setSensor("String_Node_Str");
    if (getType().startsWith("String_Node_Str")) {
      complex=true;
    }
    geotransform=GeoTransformFactory.createFromGcps(gcps,"String_Node_Str");
  }
 catch (  Exception ex) {
    logger.error(null,ex);
    return false;
  }
  return true;
}

Fixed version (ground truth):
@SuppressWarnings("String_Node_Str") public boolean initialise(){
  try {
    this.imgName=super.manifestFile.getName();
    this.imgName=this.imgName.substring(0,this.imgName.lastIndexOf("String_Node_Str"));
    this.displayName=super.manifestFile.getName();
    if (group != null && !group.equalsIgnoreCase("String_Node_Str"))     this.displayName=this.displayName + "String_Node_Str" + group;
    h5file=new H5File(super.manifestFile.getAbsolutePath(),H5File.READ);
    imagedata=(H5ScalarDS)h5file.get(internalImage);
    if (imagedata == null)     return false;
    extractQuickLook();
    HashMap<String,Object> metadata=new HashMap<>();
    List<Attribute> attrs=(imagedata.getMetadata());
    attrs.addAll(h5file.get("String_Node_Str").getMetadata());
    List<HObject> hobs=((H5Group)h5file.get("String_Node_Str")).getMemberList();
    for (    HObject ho : hobs) {
      attrs.addAll(ho.getMetadata());
    }
    for (    Attribute att : attrs) {
      metadata.put(att.getName(),att.getValue());
    }
    long[] selected=imagedata.getSelectedDims();
    selected[0]=1;
    if (selected.length > 2)     selected[2]=2;
    xSize=(int)imagedata.getDims()[1];
    ySize=(int)imagedata.getDims()[0];
    stride=imagedata.getStride();
    dims=imagedata.getSelectedDims();
    starts=imagedata.getStartDims();
    setMetaWidth(xSize);
    setMetaHeight(ySize);
    bounds=new Rectangle(0,0,xSize,ySize);
    gcps=new ArrayList<Gcp>();
    for (    String a : metadata.keySet()) {
      if (a.equals("String_Node_Str")) {
        double[] val=(double[])metadata.get(a);
        Gcp gcp=new Gcp();
        gcp.setXpix(0);
        gcp.setOriginalXpix(0.0);
        gcp.setYpix(ySize);
        gcp.setXgeo(val[1]);
        gcp.setYgeo(val[0]);
        gcps.add(gcp);
      }
 else       if (a.equals("String_Node_Str")) {
        double[] val=(double[])metadata.get(a);
        Gcp gcp=new Gcp();
        gcp.setXpix(xSize);
        gcp.setOriginalXpix(new Double(xSize));
        gcp.setYpix(ySize);
        gcp.setXgeo(val[1]);
        gcp.setYgeo(val[0]);
        gcps.add(gcp);
      }
 else       if (a.equals("String_Node_Str")) {
        double[] val=(double[])metadata.get(a);
        Gcp gcp=new Gcp();
        gcp.setXpix(0);
        gcp.setOriginalXpix(new Double(0));
        gcp.setYpix(0);
        gcp.setXgeo(val[1]);
        gcp.setYgeo(val[0]);
        gcps.add(gcp);
      }
 else       if (a.equals("String_Node_Str")) {
        double[] val=(double[])metadata.get(a);
        Gcp gcp=new Gcp();
        gcp.setXpix(xSize);
        gcp.setOriginalXpix(new Double(xSize));
        gcp.setYpix(0);
        gcp.setXgeo(val[1]);
        gcp.setYgeo(val[0]);
        gcps.add(gcp);
      }
 else       if (a.equals("String_Node_Str")) {
        String[] val=(String[])metadata.get(a);
        setTimeStampStart(val[0]);
      }
 else       if (a.equals("String_Node_Str")) {
        String[] val=(String[])metadata.get(a);
        setTimeStampStop(val[0]);
      }
 else       if (a.equals("String_Node_Str")) {
        double[] val=(double[])metadata.get(a);
        setENL(String.valueOf(val[0]));
      }
 else       if (a.equals("String_Node_Str")) {
        double[] val=(double[])metadata.get(a);
        setRangeSpacing(new Float(val[0]));
        pixelsize[0]=getRangeSpacing();
      }
 else       if (a.equals("String_Node_Str")) {
        double[] val=(double[])metadata.get(a);
        setIncidenceFar(new Float(val[0]));
      }
 else       if (a.equals("String_Node_Str")) {
        double[] val=(double[])metadata.get(a);
        setIncidenceNear(new Float(val[0]));
      }
 else       if (a.equals("String_Node_Str")) {
        double[] val=(double[])metadata.get(a);
        setAzimuthSpacing(new Float(val[0]));
        pixelsize[1]=getAzimuthSpacing();
      }
 else       if (a.equals("String_Node_Str")) {
        String[] val=(String[])metadata.get(a);
        setLookDirection(val[0]);
      }
 else       if (a.equals("String_Node_Str")) {
        String[] val=(String[])metadata.get(a);
        setOrbitDirection(val[0]);
      }
 else       if (a.equals("String_Node_Str")) {
        String[] val=(String[])metadata.get(a);
        setProcessor(val[0]);
      }
 else       if (a.equals("String_Node_Str")) {
        double[] val=(double[])metadata.get(a);
        setRadarWaveLenght(val[0]);
      }
 else       if (a.equals("String_Node_Str")) {
        String[] val=(String[])metadata.get(a);
        setType(val[0]);
      }
 else       if (a.equals("String_Node_Str")) {
        String[] val=(String[])metadata.get(a);
        setSatellite(val[0]);
      }
 else       if (a.equals("String_Node_Str")) {
        double[] val=(double[])metadata.get(a);
        setSatelliteAltitude(val[0]);
      }
 else       if (a.equals("String_Node_Str")) {
        String[] val=(String[])metadata.get(a);
        setPolarization(val[0]);
      }
 else       if (a.equals("String_Node_Str")) {
        String[] val=(String[])metadata.get(a);
        setBeam(val[0]);
      }
 else       if (a.equals("String_Node_Str")) {
        double[] val=(double[])metadata.get(a);
        setPRF(val[0]);
      }
 else       if (a.equals("String_Node_Str")) {
        double[] val=(double[])metadata.get(a);
        setPRF(val[0]);
      }
      setSatelliteOrbitInclination(97.86);
      setRevolutionsPerday(14.8125);
    }
    setSensor("String_Node_Str");
    if (getType().startsWith("String_Node_Str")) {
      complex=true;
    }
    geotransform=GeoTransformFactory.createFromGcps(gcps,"String_Node_Str");
  }
 catch (  Exception ex) {
    logger.error(null,ex);
    return false;
  }
  return true;
}