Program: 188513
Project: 188513
Buggy source:
@Override public Report execute(IndexService index,ModelService model,StorageService storage,List<AIP> list) throws PluginException {
  Report report=PluginHelper.initPluginReport(this);
  try {
    SimpleJobPluginInfo jobPluginInfo=PluginHelper.getInitialJobInformation(this,list.size());
    PluginHelper.updateJobInformation(this,jobPluginInfo);
    try {
      for (      AIP aip : list) {
        Report reportItem=PluginHelper.initPluginReportItem(this,aip.getId(),AIP.class,AIPState.INGEST_PROCESSING);
        PluginHelper.updatePartialJobReport(this,model,index,reportItem,false);
        PluginState reportState=PluginState.SUCCESS;
        VirusCheckResult virusCheckResult=null;
        Exception exception=null;
        DirectResourceAccess directAccess=null;
        try {
          LOGGER.debug("String_Node_Str",aip.getId());
          StoragePath aipPath=ModelUtils.getAIPStoragePath(aip.getId());
          directAccess=storage.getDirectAccess(aipPath);
          virusCheckResult=getAntiVirus().checkForVirus(directAccess.getPath());
          reportState=virusCheckResult.isClean() ? PluginState.SUCCESS : PluginState.FAILURE;
          reportItem.setPluginState(reportState).setPluginDetails(virusCheckResult.getReport());
          LOGGER.debug("String_Node_Str",aip.getId(),virusCheckResult.isClean());
        }
 catch (        RODAException|RuntimeException e) {
          reportState=PluginState.FAILURE;
          reportItem.setPluginState(reportState).setPluginDetails(e.getMessage());
          jobPluginInfo.incrementObjectsProcessedWithFailure();
          exception=e;
          LOGGER.error("String_Node_Str" + aip.getId(),e);
        }
 finally {
          IOUtils.closeQuietly(directAccess);
        }
        try {
          jobPluginInfo.incrementObjectsProcessed(reportState);
          boolean notify=true;
          createEvent(virusCheckResult,exception,reportItem.getPluginState(),aip,model,index,notify);
          report.addReport(reportItem);
          PluginHelper.updatePartialJobReport(this,model,index,reportItem,true);
        }
 catch (        PluginException|RuntimeException e) {
          LOGGER.error("String_Node_Str",e);
        }
      }
    }
 catch (    ClassCastException e) {
      LOGGER.error("String_Node_Str");
      jobPluginInfo.incrementObjectsProcessedWithFailure(list.size());
    }
    jobPluginInfo.finalizeInfo();
    PluginHelper.updateJobInformation(this,jobPluginInfo);
  }
 catch (  JobException e) {
    throw new PluginException("String_Node_Str",e);
  }
  return report;
}

Fixed version (ground truth):
@Override public Report execute(IndexService index,ModelService model,StorageService storage,List<AIP> list) throws PluginException {
  Report report=PluginHelper.initPluginReport(this);
  try {
    SimpleJobPluginInfo jobPluginInfo=PluginHelper.getInitialJobInformation(this,list.size());
    PluginHelper.updateJobInformation(this,jobPluginInfo);
    try {
      for (      AIP aip : list) {
        Report reportItem=PluginHelper.initPluginReportItem(this,aip.getId(),AIP.class,AIPState.INGEST_PROCESSING);
        PluginHelper.updatePartialJobReport(this,model,index,reportItem,false);
        PluginState reportState=PluginState.SUCCESS;
        VirusCheckResult virusCheckResult=null;
        Exception exception=null;
        DirectResourceAccess directAccess=null;
        try {
          LOGGER.debug("String_Node_Str",aip.getId());
          StoragePath aipPath=ModelUtils.getAIPStoragePath(aip.getId());
          directAccess=storage.getDirectAccess(aipPath);
          virusCheckResult=getAntiVirus().checkForVirus(directAccess.getPath());
          reportState=virusCheckResult.isClean() ? PluginState.SUCCESS : PluginState.FAILURE;
          reportItem.setPluginState(reportState).setPluginDetails(virusCheckResult.getReport());
          LOGGER.debug("String_Node_Str",aip.getId(),virusCheckResult.isClean());
        }
 catch (        RODAException|RuntimeException e) {
          LOGGER.error("String_Node_Str" + aip.getId(),e);
          reportState=PluginState.FAILURE;
          reportItem.setPluginState(reportState).setPluginDetails(e.getMessage());
          exception=e;
        }
 finally {
          IOUtils.closeQuietly(directAccess);
          jobPluginInfo.incrementObjectsProcessed(reportState);
          try {
            createEvent(virusCheckResult,exception,reportItem.getPluginState(),aip,model,index,true);
            report.addReport(reportItem);
            PluginHelper.updatePartialJobReport(this,model,index,reportItem,true);
          }
 catch (          PluginException e) {
            LOGGER.error("String_Node_Str",e);
          }
        }
      }
    }
 catch (    ClassCastException e) {
      LOGGER.error("String_Node_Str");
      jobPluginInfo.incrementObjectsProcessedWithFailure(list.size());
    }
    jobPluginInfo.finalizeInfo();
    PluginHelper.updateJobInformation(this,jobPluginInfo);
  }
 catch (  JobException e) {
    throw new PluginException("String_Node_Str",e);
  }
  return report;
}