Program: 5649
Project: 5649
Buggy source:
public MSP430Core(int type){
  setModeNames(MODE_NAMES);
  int passIO=0;
  ioUnits=new IOUnit[PORTS + 7];
  Timer ta=new Timer(this,Timer.TIMER_Ax149,memory,0x160);
  Timer tb=new Timer(this,Timer.TIMER_Bx149,memory,0x180);
  for (int i=0, n=0x20; i < n; i++) {
    memOut[0x160 + i]=ta;
    memOut[0x180 + i]=tb;
    memIn[0x160 + i]=ta;
    memIn[0x180 + i]=tb;
  }
  Watchdog wdt=new Watchdog(this);
  memOut[0x120]=wdt;
  memIn[0x120]=wdt;
  flash=new Flash(this,memory,new FlashRange(0x4000,0x10000,512,64),new FlashRange(0x1000,0x01100,128,64));
  for (int i=0x128; i < 0x12e; i++) {
    memOut[i]=flash;
    memIn[i]=flash;
  }
  sfr=new SFR(this,memory);
  for (int i=0, n=0x10; i < n; i++) {
    memOut[i]=sfr;
    memIn[i]=sfr;
  }
  memIn[Timer.TAIV]=ta;
  memIn[Timer.TBIV]=tb;
  bcs=new BasicClockModule(this,memory,0,new Timer[]{ta,tb});
  for (int i=0x56, n=0x59; i < n; i++) {
    memOut[i]=bcs;
  }
  Multiplier mp=new Multiplier(this,memory,0);
  for (int i=0x130, n=0x13f; i < n; i++) {
    memOut[i]=mp;
    memIn[i]=mp;
  }
  USART usart0=new USART(this,memory,0x70);
  USART usart1=new USART(this,memory,0x78);
  for (int i=0, n=8; i < n; i++) {
    memOut[0x70 + i]=usart0;
    memIn[0x70 + i]=usart0;
    memOut[0x78 + i]=usart1;
    memIn[0x78 + i]=usart1;
  }
  ioUnits[0]=new IOPort(this,"String_Node_Str",4,memory,0x20);
  ioUnits[1]=new IOPort(this,"String_Node_Str",1,memory,0x28);
  for (int i=0, n=8; i < n; i++) {
    memOut[0x20 + i]=ioUnits[0];
    memOut[0x28 + i]=ioUnits[1];
  }
  for (int i=0, n=2; i < n; i++) {
    ioUnits[i + 2]=new IOPort(this,"String_Node_Str" + (3 + i),0,memory,0x18 + i * 4);
    memOut[0x18 + i * 4]=ioUnits[i + 2];
    memOut[0x19 + i * 4]=ioUnits[i + 2];
    memOut[0x1a + i * 4]=ioUnits[i + 2];
    memOut[0x1b + i * 4]=ioUnits[i + 2];
    ioUnits[i + 4]=new IOPort(this,"String_Node_Str" + (5 + i),0,memory,0x30 + i * 4);
    memOut[0x30 + i * 4]=ioUnits[i + 4];
    memOut[0x31 + i * 4]=ioUnits[i + 4];
    memOut[0x32 + i * 4]=ioUnits[i + 4];
    memOut[0x33 + i * 4]=ioUnits[i + 4];
  }
  passIO=6;
  ioUnits[passIO++]=bcs;
  ioUnits[passIO++]=usart0;
  ioUnits[passIO++]=usart1;
  ioUnits[passIO++]=ta;
  ioUnits[passIO++]=tb;
  ADC12 adc12=new ADC12(this);
  ioUnits[passIO++]=adc12;
  ioUnits[passIO++]=sfr;
  for (int i=0, n=16; i < n; i++) {
    memOut[0x80 + i]=adc12;
    memIn[0x80 + i]=adc12;
    memOut[0x140 + i]=adc12;
    memIn[0x140 + i]=adc12;
    memOut[0x150 + i]=adc12;
    memIn[0x150 + i]=adc12;
  }
  for (int i=0, n=8; i < n; i++) {
    memOut[0x1A0 + i]=adc12;
    memIn[0x1A0 + i]=adc12;
  }
  if (DEBUG)   System.out.println("String_Node_Str" + passIO);
}

Fixed version (ground truth):
public MSP430Core(int type){
  setModeNames(MODE_NAMES);
  int passIO=0;
  ioUnits=new IOUnit[PORTS + 7];
  Timer ta=new Timer(this,Timer.TIMER_Ax149,memory,0x160);
  Timer tb=new Timer(this,Timer.TIMER_Bx149,memory,0x180);
  for (int i=0, n=0x20; i < n; i++) {
    memOut[0x160 + i]=ta;
    memOut[0x180 + i]=tb;
    memIn[0x160 + i]=ta;
    memIn[0x180 + i]=tb;
  }
  Watchdog wdt=new Watchdog(this);
  memOut[0x120]=wdt;
  memIn[0x120]=wdt;
  flash=new Flash(this,memory,new FlashRange(0x4000,0x10000,512,64),new FlashRange(0x1000,0x01100,128,64));
  for (int i=0x128; i < 0x12e; i++) {
    memOut[i]=flash;
    memIn[i]=flash;
  }
  sfr=new SFR(this,memory);
  for (int i=0, n=0x10; i < n; i++) {
    memOut[i]=sfr;
    memIn[i]=sfr;
  }
  memIn[Timer.TAIV]=ta;
  memOut[Timer.TAIV]=ta;
  memIn[Timer.TBIV]=tb;
  memOut[Timer.TBIV]=tb;
  bcs=new BasicClockModule(this,memory,0,new Timer[]{ta,tb});
  for (int i=0x56, n=0x59; i < n; i++) {
    memOut[i]=bcs;
  }
  Multiplier mp=new Multiplier(this,memory,0);
  for (int i=0x130, n=0x13f; i < n; i++) {
    memOut[i]=mp;
    memIn[i]=mp;
  }
  USART usart0=new USART(this,memory,0x70);
  USART usart1=new USART(this,memory,0x78);
  for (int i=0, n=8; i < n; i++) {
    memOut[0x70 + i]=usart0;
    memIn[0x70 + i]=usart0;
    memOut[0x78 + i]=usart1;
    memIn[0x78 + i]=usart1;
  }
  ioUnits[0]=new IOPort(this,"String_Node_Str",4,memory,0x20);
  ioUnits[1]=new IOPort(this,"String_Node_Str",1,memory,0x28);
  for (int i=0, n=8; i < n; i++) {
    memOut[0x20 + i]=ioUnits[0];
    memOut[0x28 + i]=ioUnits[1];
  }
  for (int i=0, n=2; i < n; i++) {
    ioUnits[i + 2]=new IOPort(this,"String_Node_Str" + (3 + i),0,memory,0x18 + i * 4);
    memOut[0x18 + i * 4]=ioUnits[i + 2];
    memOut[0x19 + i * 4]=ioUnits[i + 2];
    memOut[0x1a + i * 4]=ioUnits[i + 2];
    memOut[0x1b + i * 4]=ioUnits[i + 2];
    ioUnits[i + 4]=new IOPort(this,"String_Node_Str" + (5 + i),0,memory,0x30 + i * 4);
    memOut[0x30 + i * 4]=ioUnits[i + 4];
    memOut[0x31 + i * 4]=ioUnits[i + 4];
    memOut[0x32 + i * 4]=ioUnits[i + 4];
    memOut[0x33 + i * 4]=ioUnits[i + 4];
  }
  passIO=6;
  ioUnits[passIO++]=bcs;
  ioUnits[passIO++]=usart0;
  ioUnits[passIO++]=usart1;
  ioUnits[passIO++]=ta;
  ioUnits[passIO++]=tb;
  ADC12 adc12=new ADC12(this);
  ioUnits[passIO++]=adc12;
  ioUnits[passIO++]=sfr;
  for (int i=0, n=16; i < n; i++) {
    memOut[0x80 + i]=adc12;
    memIn[0x80 + i]=adc12;
    memOut[0x140 + i]=adc12;
    memIn[0x140 + i]=adc12;
    memOut[0x150 + i]=adc12;
    memIn[0x150 + i]=adc12;
  }
  for (int i=0, n=8; i < n; i++) {
    memOut[0x1A0 + i]=adc12;
    memIn[0x1A0 + i]=adc12;
  }
  if (DEBUG)   System.out.println("String_Node_Str" + passIO);
}