Program: 9612
Project: 9612
Buggy source:
public void init(String[] configFilesArgs,boolean visible){
  try {
    UserPreferencesAdapter preferencesAdapter=new UserPreferencesStore(true);
    browserProjectProperties=new BrowserProperties(preferencesAdapter);
    TaskListManager taskListManager=new CompilerMessagesPanel();
    BasicEditor ajdeEditor=new BasicEditor();
    BrowserUIAdapter browserUIAdapter=new BrowserUIAdapter();
    topFrame=new TopFrame();
    configFiles=getConfigFilesList(configFilesArgs);
    AjdeUIManager.getDefault().init(ajdeEditor,taskListManager,browserProjectProperties,preferencesAdapter,browserUIAdapter,new IconRegistry(),topFrame,true);
    Ajde.getDefault().getBuildManager().addListener(BUILD_MESSAGES_LISTENER);
    MultiStructureViewPanel multiViewPanel=new MultiStructureViewPanel(AjdeUIManager.getDefault().getViewManager().getBrowserPanel(),AjdeUIManager.getDefault().getFileStructurePanel());
    topFrame.init(multiViewPanel,(CompilerMessagesPanel)taskListManager,Ajde.getDefault().getEditorManager().getEditorPanel());
    if (visible)     topFrame.setVisible(true);
    if (configFiles.size() == 0) {
      Ajde.getDefault().getErrorHandler().handleWarning("String_Node_Str" + "String_Node_Str");
    }
 else {
    }
    AjdeUIManager.getDefault().getOptionsFrame().addOptionsPanel(new BrowserOptionsPanel());
    if (configFilesArgs.length > 0 && configFilesArgs[0] != null) {
      Ajde.getDefault().getConfigurationManager().setActiveConfigFile(configFilesArgs[0]);
    }
  }
 catch (  Throwable t) {
    t.printStackTrace();
    Ajde.getDefault().getErrorHandler().handleError("String_Node_Str",t);
  }
}

Fixed version (ground truth):
public void init(String[] configFilesArgs,boolean visible){
  try {
    UserPreferencesAdapter preferencesAdapter=new UserPreferencesStore(true);
    browserProjectProperties=new BrowserProperties(preferencesAdapter);
    TaskListManager taskListManager=new CompilerMessagesPanel();
    BasicEditor ajdeEditor=new BasicEditor();
    BrowserUIAdapter browserUIAdapter=new BrowserUIAdapter();
    topFrame=new TopFrame();
    configFiles=getConfigFilesList(configFilesArgs);
    AjdeUIManager.getDefault().init(ajdeEditor,taskListManager,browserProjectProperties,preferencesAdapter,browserUIAdapter,new IconRegistry(),topFrame);
    editorManager=new EditorManager(ajdeEditor);
    FileStructureView structureView=Ajde.getDefault().getStructureViewManager().createViewForSourceFile(editorManager.getCurrFile(),Ajde.getDefault().getStructureViewManager().getDefaultViewProperties());
    Ajde.getDefault().getStructureViewManager().setDefaultFileView(structureView);
    fileStructurePanel=new StructureViewPanel(structureView);
    Ajde.getDefault().getBuildManager().addListener(BUILD_MESSAGES_LISTENER);
    MultiStructureViewPanel multiViewPanel=new MultiStructureViewPanel(AjdeUIManager.getDefault().getViewManager().getBrowserPanel(),fileStructurePanel);
    topFrame.init(multiViewPanel,(CompilerMessagesPanel)taskListManager,editorManager.getEditorPanel());
    if (visible)     topFrame.setVisible(true);
    if (configFiles.size() == 0) {
      Ajde.getDefault().getErrorHandler().handleWarning("String_Node_Str" + "String_Node_Str");
    }
 else {
    }
    AjdeUIManager.getDefault().getOptionsFrame().addOptionsPanel(new BrowserOptionsPanel());
    StructureModelManager.getDefault().addListener(VIEW_LISTENER);
    if (configFilesArgs.length > 0 && configFilesArgs[0] != null) {
      Ajde.getDefault().getConfigurationManager().setActiveConfigFile(configFilesArgs[0]);
    }
  }
 catch (  Throwable t) {
    t.printStackTrace();
    Ajde.getDefault().getErrorHandler().handleError("String_Node_Str",t);
  }
}