nus-yam/ex-repair huggingface dataset:
Program: 38139
Project: 38139
Buggy source:
@Override public Response execute(){
  DatabaseAccessor db=null;
  List<Experiment> searchResult=null;
  try {
    annotations=URLDecoder.decode(annotations,"String_Node_Str");
  }
 catch (  UnsupportedEncodingException e) {
    e.printStackTrace();
    return new ErrorResponse(HttpStatusCode.BAD_REQUEST,"String_Node_Str" + "String_Node_Str");
  }
  try {
    db=initDB();
    searchResult=db.search(annotations);
  }
 catch (  SQLException|IOException e) {
    return new ErrorResponse(HttpStatusCode.SERVICE_UNAVAILABLE,e.getMessage());
  }
catch (  ParseException e) {
    return new ErrorResponse(HttpStatusCode.BAD_REQUEST,e.getMessage());
  }
 finally {
    if (db != null)     db.close();
  }
  SearchResponse response=new SearchResponse(searchResult);
  return response;
}

Fixed version (ground truth):
@Override public Response execute(){
  DatabaseAccessor db=null;
  List<Experiment> searchResult=null;
  try {
    annotations=URLDecoder.decode(annotations,"String_Node_Str");
  }
 catch (  UnsupportedEncodingException e) {
    Debug.log("String_Node_Str" + annotations + "String_Node_Str"+ e.getMessage());
    return new ErrorResponse(HttpStatusCode.BAD_REQUEST,"String_Node_Str" + annotations + "String_Node_Str");
  }
  try {
    db=initDB();
    searchResult=db.search(annotations);
  }
 catch (  SQLException|IOException e) {
    Debug.log("String_Node_Str" + annotations + "String_Node_Str"+ e.getMessage());
    return new ErrorResponse(HttpStatusCode.INTERNAL_SERVER_ERROR,"String_Node_Str" + annotations + "String_Node_Str");
  }
catch (  ParseException e) {
    Debug.log("String_Node_Str" + annotations + "String_Node_Str"+ e.getMessage());
    return new ErrorResponse(HttpStatusCode.BAD_REQUEST,"String_Node_Str" + "String_Node_Str");
  }
 finally {
    if (db != null)     db.close();
  }
  SearchResponse response=new SearchResponse(searchResult);
  return response;
}
Program: 38140
Project: 38140
Buggy source:
/** 
 * Perform the action of the command and return a response. A connection to the database is established, authentication is performed and a response is return of the result.
 * @return a response of the result of the command.
 */
@Override public Response execute(){
  DatabaseAccessor db;
  String dbHash;
  try {
    db=initDB();
    dbHash=db.getPasswordHash(username);
  }
 catch (  SQLException|IOException e) {
    Debug.log("String_Node_Str" + username + "String_Node_Str"+ e.getMessage());
    return new ErrorResponse(HttpStatusCode.BAD_REQUEST,"String_Node_Str" + username + "String_Node_Str"+ e.getMessage());
  }
  if (dbHash == null || dbHash.isEmpty()) {
    return new ErrorResponse(HttpStatusCode.UNAUTHORIZED,"String_Node_Str" + username);
  }
  LoginAttempt login=Authenticate.login(username,oldPassword,dbHash);
  if (login.wasSuccessful()) {
    try {
      String hash=BCrypt.hashpw(newPassword,BCrypt.gensalt());
      db.updateUser(username,hash,name,email);
    }
 catch (    SQLException|IOException e) {
      Debug.log("String_Node_Str" + username + "String_Node_Str"+ e.getMessage());
      return new ErrorResponse(HttpStatusCode.BAD_REQUEST,"String_Node_Str" + "String_Node_Str" + username + "String_Node_Str"+ e.getMessage());
    }
    return new MinimalResponse(HttpStatusCode.OK);
  }
  Debug.log("String_Node_Str" + username + "String_Node_Str");
  return new ErrorResponse(HttpStatusCode.UNAUTHORIZED,"String_Node_Str" + username + "String_Node_Str"+ login.getErrorMessage());
}

Fixed version (ground truth):
/** 
 * Perform the action of the command and return a response. A connection to the database is established, authentication is performed and a response is return of the result.
 * @return a response of the result of the command.
 */
@Override public Response execute(){
  DatabaseAccessor db;
  String dbHash;
  try {
    db=initDB();
    dbHash=db.getPasswordHash(username);
  }
 catch (  SQLException|IOException e) {
    Debug.log("String_Node_Str" + username + "String_Node_Str"+ e.getMessage());
    return new ErrorResponse(HttpStatusCode.INTERNAL_SERVER_ERROR,"String_Node_Str" + "String_Node_Str");
  }
  if (dbHash == null || dbHash.isEmpty()) {
    return new ErrorResponse(HttpStatusCode.UNAUTHORIZED,"String_Node_Str" + username);
  }
  LoginAttempt login=Authenticate.login(username,oldPassword,dbHash);
  if (login.wasSuccessful()) {
    try {
      String hash=BCrypt.hashpw(newPassword,BCrypt.gensalt());
      db.updateUser(username,hash,name,email);
    }
 catch (    SQLException|IOException e) {
      Debug.log("String_Node_Str" + username + "String_Node_Str"+ e.getMessage());
      return new ErrorResponse(HttpStatusCode.INTERNAL_SERVER_ERROR,"String_Node_Str" + "String_Node_Str");
    }
 finally {
      if (db != null)       db.close();
    }
    return new MinimalResponse(HttpStatusCode.OK);
  }
  Debug.log("String_Node_Str" + username + "String_Node_Str");
  return new ErrorResponse(HttpStatusCode.UNAUTHORIZED,"String_Node_Str" + "String_Node_Str");
}
Program: 38141
Project: 38141
Buggy source:
/** 
 * Used to execute the actual password change of the user.
 */
@Override public Response execute(){
  DatabaseAccessor db=null;
  try {
    db=initDB();
  }
 catch (  SQLException|IOException e) {
    Debug.log("String_Node_Str" + username + "String_Node_Str"+ e.getMessage());
    return new ErrorResponse(HttpStatusCode.BAD_REQUEST,"String_Node_Str" + username + "String_Node_Str"+ e.getMessage());
  }
  String hash=BCrypt.hashpw(password,BCrypt.gensalt());
  try {
    db.resetPassword(username,hash);
  }
 catch (  SQLException|IOException e) {
    return new ErrorResponse(HttpStatusCode.BAD_REQUEST,"String_Node_Str" + e.getMessage());
  }
  return new MinimalResponse(HttpStatusCode.CREATED);
}

Fixed version (ground truth):
/** 
 * Used to execute the actual password change of the user.
 */
@Override public Response execute(){
  DatabaseAccessor db;
  try {
    db=initDB();
  }
 catch (  SQLException|IOException e) {
    Debug.log("String_Node_Str" + username + "String_Node_Str"+ e.getMessage());
    return new ErrorResponse(HttpStatusCode.INTERNAL_SERVER_ERROR,"String_Node_Str" + username + "String_Node_Str");
  }
  String hash=BCrypt.hashpw(password,BCrypt.gensalt());
  try {
    db.resetPassword(username,hash);
  }
 catch (  SQLException|IOException e) {
    Debug.log("String_Node_Str" + username + "String_Node_Str"+ e.getMessage());
    return new ErrorResponse(HttpStatusCode.INTERNAL_SERVER_ERROR,"String_Node_Str" + username + "String_Node_Str");
  }
 finally {
    if (db != null)     db.close();
  }
  return new MinimalResponse(HttpStatusCode.CREATED);
}
Program: 38142
Project: 38142
Buggy source:
/** 
 * Validates that all parameters procedure takes is valid.
 * @param parameters
 * @param inFolder
 * @param outFilePath
 * @return
 */
private boolean verifyInData(String[] parameters,String inFolder,String outFilePath){
  if (parameters == null) {
    System.out.println("String_Node_Str");
    return false;
  }
  if (parameters.length < 0) {
    System.out.println("String_Node_Str");
    return false;
  }
 else   if (parameters.length > 8) {
    System.out.println("String_Node_Str");
    return false;
  }
  if (inFolder == null || outFilePath == null) {
    System.out.println("String_Node_Str");
    return false;
  }
  if (!checkIfFolderExists(outFilePath) || !checkIfFolderExists(inFolder)) {
    System.out.println("String_Node_Str");
    return false;
  }
  return true;
}

Fixed version (ground truth):
/** 
 * Validates that all parameters procedure takes is valid.
 * @param parameters
 * @param inFolder
 * @param outFilePath
 * @return
 */
private boolean verifyInData(String[] parameters,String inFolder,String outFilePath){
  if (parameters == null) {
    ErrorLogger.log("String_Node_Str","String_Node_Str" + "String_Node_Str");
    return false;
  }
  if (parameters.length < 0) {
    ErrorLogger.log("String_Node_Str","String_Node_Str");
    return false;
  }
 else   if (parameters.length > 8) {
    ErrorLogger.log("String_Node_Str","String_Node_Str");
    return false;
  }
  if (inFolder == null || outFilePath == null) {
    ErrorLogger.log("String_Node_Str","String_Node_Str");
    return false;
  }
  if (!checkIfFolderExists(outFilePath) || !checkIfFolderExists(inFolder)) {
    ErrorLogger.log("String_Node_Str","String_Node_Str");
    return false;
  }
  return true;
}
Program: 38143
Project: 38143
Buggy source:
/** 
 * Initiates strings using the incoming parameters and executes the two scripts to do the ratio calculation.
 * @param dirPath the path to where the files used to run ratio calculation is
 * @param parameters contains the parameters for the two scripts
 * @throws ProcessException
 */
private void doRatioCalculation(String dirPath,String[] parameters) throws ProcessException {
  String ratioCalc="String_Node_Str" + dirPath + "String_Node_Str"+ parameters[6];
  try {
    logString=logString + executeScript(parse(ratioCalc));
    System.out.println("String_Node_Str" + logString);
  }
 catch (  InterruptedException e) {
    throw new ProcessException("String_Node_Str" + dirPath);
  }
catch (  IOException e) {
    throw new ProcessException("String_Node_Str" + dirPath);
  }
}

Fixed version (ground truth):
/** 
 * Initiates strings using the incoming parameters and executes the two scripts to do the ratio calculation.
 * @param dirPath the path to where the files used to run ratio calculation is
 * @param parameters contains the parameters for the two scripts
 * @throws ProcessException
 */
private void doRatioCalculation(String dirPath,String[] parameters) throws ProcessException {
  String ratioCalc="String_Node_Str" + dirPath + "String_Node_Str"+ parameters[6];
  try {
    logString=logString + executeScript(parse(ratioCalc));
    ErrorLogger.log("String_Node_Str","String_Node_Str" + logString);
  }
 catch (  InterruptedException e) {
    throw new ProcessException("String_Node_Str" + dirPath);
  }
catch (  IOException e) {
    throw new ProcessException("String_Node_Str" + dirPath);
  }
}
Program: 38144
Project: 38144
Buggy source:
/** 
 * Constructs a string array with the values to run bowtie on the file that comes as parameter.
 * @param fileOne the name of the file with the file extension.
 * @param fileOneName the name of the file without the file extension.
 * @return the value that bowtie returns.ckIfFolderExists(outFilePath)
 * @throws InterruptedException
 * @throws IOException
 * @throws ProcessException
 */
private String runBowTie(String fileOne,String fileOneName) throws ProcessException {
  String bowTieParams=checkBowTieProcessors(parameters[0]);
  String[] bowTieParameters=parse(ServerSettings.bowtieLocation + "String_Node_Str" + bowTieParams+ "String_Node_Str"+ parameters[1]+ "String_Node_Str"+ inFolder+ "String_Node_Str"+ fileOne+ "String_Node_Str"+ dir+ fileOneName+ "String_Node_Str");
  try {
    return executeProgram(bowTieParameters);
  }
 catch (  InterruptedException e) {
    throw new ProcessException("String_Node_Str" + fileOneName);
  }
catch (  IOException e) {
    throw new ProcessException("String_Node_Str" + fileOneName + "String_Node_Str");
  }
}

Fixed version (ground truth):
/** 
 * Constructs a string array with the values to run bowtie on the file that comes as parameter.
 * @param fileOne the name of the file with the file extension.
 * @param fileOneName the name of the file without the file extension.
 * @return the value that bowtie returns.ckIfFolderExists(outFilePath)
 * @throws InterruptedException
 * @throws IOException
 * @throws ProcessException
 */
private String runBowTie(String fileOne,String fileOneName) throws ProcessException {
  String bowTieParams=checkBowTieProcessors(parameters[0]);
  String[] bowTieParameters=parse("String_Node_Str" + ServerSettings.bowtieLocation + "String_Node_Str"+ bowTieParams+ "String_Node_Str"+ parameters[1]+ "String_Node_Str"+ inFolder+ "String_Node_Str"+ fileOne+ "String_Node_Str"+ dir+ fileOneName+ "String_Node_Str");
  try {
    return executeProgram(bowTieParameters);
  }
 catch (  InterruptedException e) {
    throw new ProcessException("String_Node_Str" + fileOneName);
  }
catch (  IOException e) {
    throw new ProcessException("String_Node_Str" + fileOneName + "String_Node_Str");
  }
}
Program: 38146
Project: 38146
Buggy source:
public synchronized HashMap<ProcessCommand,ProcessStatus> getProcesses(){
  return processStatus;
}

Fixed version (ground truth):
public synchronized HashMap<ProcessCommand,ProcessStatus> getProcesses(){
  return new HashMap<>(processStatus);
}
Program: 38147
Project: 38147
Buggy source:
/** 
 * Used when first adding a new experiment. Creates a folder for the experiment and subfolders for files
 * @param String expID, the ID for the experiment
 */
public void generateExperimentFolders(String expID){
  File file=new File(getRawFolderPath(expID));
  file.mkdirs();
  file=new File(getProfileFolderPath(expID));
  file.mkdirs();
  file=new File(getRegionFolderPath(expID));
  file.mkdirs();
  file=new File(getUnknownFolderPath(expID));
  file.mkdirs();
}

Fixed version (ground truth):
/** 
 * Used when first adding a new experiment. Creates a folder for the experiment and subfolders for files
 * @param String expID, the ID for the experiment
 */
public void generateExperimentFolders(String expID){
  File file=new File(getRawFolderPath(expID));
  file.mkdirs();
  file=new File(getProfileFolderPath(expID));
  file.mkdirs();
  file=new File(getRegionFolderPath(expID));
  file.mkdirs();
  file=new File(getUnknownFolderPath(expID));
  file.mkdirs();
  Runtime.getRuntime().exec("String_Node_Str" + ServerSettings.fileLocation);
}
Program: 38148
Project: 38148
Buggy source:
/** 
 * Used when first adding a new experiment. Creates a folder for the experiment and subfolders for files
 * @param String expID, the ID for the experiment
 */
public void generateExperimentFolders(String expID){
  File file=new File(getRawFolderPath(expID));
  file.mkdirs();
  file=new File(getProfileFolderPath(expID));
  file.mkdirs();
  file=new File(getRegionFolderPath(expID));
  file.mkdirs();
  file=new File(getUnknownFolderPath(expID));
  file.mkdirs();
}

Fixed version (ground truth):
/** 
 * Used when first adding a new experiment. Creates a folder for the experiment and subfolders for files
 * @param String expID, the ID for the experiment
 */
public void generateExperimentFolders(String expID){
  File file=new File(getRawFolderPath(expID));
  file.setReadable();
  file.setWritable();
  file.setExecutable();
  file.mkdirs();
  file=new File(getProfileFolderPath(expID));
  file.mkdirs();
  file=new File(getRegionFolderPath(expID));
  file.mkdirs();
  file=new File(getUnknownFolderPath(expID));
  file.mkdirs();
  Runtime.getRuntime().exec("String_Node_Str" + ServerSettings.fileLocation);
}
Program: 38149
Project: 38149
Buggy source:
@Before public void setup(){
  this.hasher=new PasswordHash();
}

Fixed version (ground truth):
@Before public void setup(){
}
Program: 38150
Project: 38150
Buggy source:
/** 
 * @return If the hashing returns null if a empty string is given.
 */
@Test public void toSaltedSHA256HashTestEmpty(){
  assertNull(hasher.toSaltedSHA256Hash("String_Node_Str"));
}

Fixed version (ground truth):
/** 
 * @return If the hashing returns null if a empty string is given.
 */
@Test public void toSaltedSHA256HashTestEmpty(){
  assertNull(PasswordHash.toSaltedSHA256Hash("String_Node_Str"));
}
Program: 38151
Project: 38151
Buggy source:
/** 
 * @return If the hashing is the same for the same string.
 */
@Test public void toSaltedSHA256HashTestEquals(){
  assertEquals(hasher.toSaltedSHA256Hash("String_Node_Str"),(hasher.toSaltedSHA256Hash("String_Node_Str")));
}

Fixed version (ground truth):
/** 
 * @return If the hashing is the same for the same string.
 */
@Test public void toSaltedSHA256HashTestEquals(){
  assertEquals(PasswordHash.toSaltedSHA256Hash("String_Node_Str"),(PasswordHash.toSaltedSHA256Hash("String_Node_Str")));
}
Program: 38152
Project: 38152
Buggy source:
/** 
 * @return If the hashing is different for different strings.
 */
@Test public void toSaltedSHA256HashTestNotEquals(){
  assertNotEquals(hasher.toSaltedSHA256Hash("String_Node_Str"),(hasher.toSaltedSHA256Hash("String_Node_Str")));
}

Fixed version (ground truth):
/** 
 * @return If the hashing is different for different strings.
 */
@Test public void toSaltedSHA256HashTestNotEquals(){
  assertNotEquals(PasswordHash.toSaltedSHA256Hash("String_Node_Str"),(PasswordHash.toSaltedSHA256Hash("String_Node_Str")));
}
Program: 38153
Project: 38153
Buggy source:
/** 
 * @param args
 * @throws ParseException
 * @throws FileNotFoundException
 */
public static void main(String[] args) throws ParseException, FileNotFoundException {
  CommandLine com=loadSettingsFile(args);
  StartUpCleaner.removeOldTempDirectories("String_Node_Str");
  printDatabaseInformation();
  try {
    new Doorman(new CommandHandler(),ServerSettings.genomizerPort).start();
  }
 catch (  IOException e) {
    System.err.println("String_Node_Str");
    Debug.log(e.getMessage());
    System.exit(1);
  }
  if (!com.hasOption("String_Node_Str")) {
    (new Thread(new InactiveUuidsRemover())).start();
  }
}

Fixed version (ground truth):
/** 
 * @param args
 * @throws ParseException
 * @throws FileNotFoundException
 */
public static void main(String[] args) throws ParseException, FileNotFoundException {
  System.out.println("String_Node_Str");
  CommandLine com=loadSettingsFile(args);
  StartUpCleaner.removeOldTempDirectories("String_Node_Str");
  printDatabaseInformation();
  try {
    new Doorman(new CommandHandler(),ServerSettings.genomizerPort).start();
  }
 catch (  IOException e) {
    System.err.println("String_Node_Str");
    Debug.log(e.getMessage());
    System.exit(1);
  }
  if (!com.hasOption("String_Node_Str")) {
    (new Thread(new InactiveUuidsRemover())).start();
  }
}
Program: 38154
Project: 38154
Buggy source:
/** 
 * Print the database settings currently loaded into ServerSettings.
 */
private void printDatabaseInformation(){
  System.out.println("String_Node_Str" + ServerSettings.genomizerPort);
  System.out.println("String_Node_Str");
  System.out.println("String_Node_Str" + ServerSettings.databaseUsername);
  System.out.println("String_Node_Str" + ServerSettings.databasePassword);
  System.out.println("String_Node_Str" + ServerSettings.databaseName);
  System.out.println("String_Node_Str" + ServerSettings.databaseHost);
}

Fixed version (ground truth):
/** 
 * Print the database settings currently loaded into ServerSettings.
 */
private static void printDatabaseInformation(){
  System.out.println("String_Node_Str" + ServerSettings.genomizerPort);
  System.out.println("String_Node_Str");
  System.out.println("String_Node_Str" + ServerSettings.databaseUsername);
  System.out.println("String_Node_Str" + ServerSettings.databasePassword);
  System.out.println("String_Node_Str" + ServerSettings.databaseName);
  System.out.println("String_Node_Str" + ServerSettings.databaseHost);
}
Program: 38155
Project: 38155
Buggy source:
/** 
 * Builds a list of strings from a sql file so that they can be executed with jdbc.
 * @param path The path to the sql file
 * @return A list of sql strings from the file
 * @throws UnsupportedEncodingException
 * @throws IOException
 */
private List<String> buildSqlStringsFromFile(String path) throws UnsupportedEncodingException, IOException {
  List<String> sqlStrings=new ArrayList<String>();
  URL sqlFileUrl=SearchDatabaseTests.class.getResource(path);
  if (sqlFileUrl != null) {
    BufferedReader in=new BufferedReader(new InputStreamReader(sqlFileUrl.openStream(),"String_Node_Str"));
    String line=in.readLine();
    StringBuilder statement=new StringBuilder();
    while (line != null) {
      statement.append(line);
      if (line.endsWith("String_Node_Str")) {
        statement.deleteCharAt(statement.length() - 1);
        sqlStrings.add(statement.toString());
        statement.delete(0,statement.length());
      }
      line=in.readLine();
    }
  }
 else {
    throw new IOException("String_Node_Str" + path);
  }
  return sqlStrings;
}

Fixed version (ground truth):
/** 
 * Builds a list of strings from a sql file so that they can be executed with jdbc.
 * @param path The path to the sql file
 * @return A list of sql strings from the file
 * @throws UnsupportedEncodingException
 * @throws IOException
 */
private List<String> buildSqlStringsFromFile(String path) throws UnsupportedEncodingException, IOException {
  List<String> sqlStrings=new ArrayList<String>();
  URL sqlFileUrl=new File(path).toURI().toURL();
  if (sqlFileUrl != null) {
    BufferedReader in=new BufferedReader(new InputStreamReader(sqlFileUrl.openStream(),"String_Node_Str"));
    String line=in.readLine();
    StringBuilder statement=new StringBuilder();
    while (line != null) {
      statement.append(line);
      if (line.endsWith("String_Node_Str")) {
        statement.deleteCharAt(statement.length() - 1);
        sqlStrings.add(statement.toString());
        statement.delete(0,statement.length());
      }
      line=in.readLine();
    }
  }
 else {
    throw new IOException("String_Node_Str" + path);
  }
  return sqlStrings;
}
Program: 38156
Project: 38156
Buggy source:
public void testAnnotation(){
  ArrayList<AnnotationInformation> arraylist=new ArrayList<AnnotationInformation>();
  ArrayList<String> gender=new ArrayList<String>();
  gender.add("String_Node_Str");
  gender.add("String_Node_Str");
  gender.add("String_Node_Str");
  AnnotationInformation ai=new AnnotationInformation(1,"String_Node_Str",AnnotationInformation.TYPE_DROP_DOWN,gender,true);
  arraylist.add(ai);
  ArrayList<String> cellLine=new ArrayList<String>();
  cellLine.add("String_Node_Str");
  cellLine.add("String_Node_Str");
  cellLine.add("String_Node_Str");
  AnnotationInformation ai2=new AnnotationInformation(2,"String_Node_Str",AnnotationInformation.TYPE_DROP_DOWN,cellLine,true);
  arraylist.add(ai2);
  GetAnnotationInformationResponse air=new GetAnnotationInformationResponse(200,arraylist);
  System.out.println(air.getBody());
  assertEquals(air.getBody(),"String_Node_Str");
}

Fixed version (ground truth):
public void testAnnotation(){
  ArrayList<AnnotationInformation> arraylist=new ArrayList<AnnotationInformation>();
  ArrayList<String> gender=new ArrayList<String>();
  gender.add("String_Node_Str");
  gender.add("String_Node_Str");
  gender.add("String_Node_Str");
  AnnotationInformation ai=new AnnotationInformation("String_Node_Str",gender,true);
  arraylist.add(ai);
  ArrayList<String> cellLine=new ArrayList<String>();
  cellLine.add("String_Node_Str");
  cellLine.add("String_Node_Str");
  cellLine.add("String_Node_Str");
  AnnotationInformation ai2=new AnnotationInformation("String_Node_Str",cellLine,true);
  arraylist.add(ai2);
  GetAnnotationInformationResponse air=new GetAnnotationInformationResponse(200,arraylist);
  System.out.println(air.getBody());
  assertEquals(air.getBody(),"String_Node_Str");
}
Program: 38157
Project: 38157
Buggy source:
@Test public void testPrintResponse(){
  ArrayList<Genome> genomeList;
  try {
    DatabaseAccessor db=new DatabaseAccessor(ServerSettings.databaseUsername,ServerSettings.databasePassword,ServerSettings.databaseHost,ServerSettings.databaseName);
    genomeList=db.getAllGenomReleases();
    GetGenomeReleaseRespons gResp=new GetGenomeReleaseRespons(StatusCode.OK,genomeList);
    System.out.println(gResp.getBody());
  }
 catch (  SQLException e) {
    e.printStackTrace();
  }
catch (  IOException e) {
    e.printStackTrace();
  }
}

Fixed version (ground truth):
@Test public void testPrintResponse(){
  ArrayList<database.containers.Genome> genomeList;
  try {
    DatabaseAccessor db=new DatabaseAccessor(ServerSettings.databaseUsername,ServerSettings.databasePassword,ServerSettings.databaseHost,ServerSettings.databaseName);
    genomeList=(ArrayList<database.containers.Genome>)db.getAllGenomReleases();
    GetGenomeReleaseRespons gResp=new GetGenomeReleaseRespons(StatusCode.OK,genomeList);
    System.out.println(gResp.getBody());
  }
 catch (  SQLException e) {
    e.printStackTrace();
  }
catch (  IOException e) {
    e.printStackTrace();
  }
}
Program: 38158
Project: 38158
Buggy source:
@Test public void shouldLogBADREQUESTError(){
  String username="String_Node_Str";
  Response r=new MinimalResponse(StatusCode.BAD_REQUEST);
  if (ErrorLogger.log(username,r)) {
    assertEquals(StatusCode.BAD_REQUEST,ErrorLogger.getUserLog(username).get(0).getCode());
  }
 else {
    fail();
  }
  ErrorLogger.printUserLog("String_Node_Str");
}

Fixed version (ground truth):
@Test public void shouldLogBADREQUESTError(){
  String username="String_Node_Str";
  Response r=new MinimalResponse(StatusCode.BAD_REQUEST);
  ErrorLogger.printUserLog("String_Node_Str");
}
Program: 38159
Project: 38159
Buggy source:
@Test public void shouldLog2BADREQUESTErrors(){
  String username="String_Node_Str";
  Response r1=new MinimalResponse(StatusCode.BAD_REQUEST);
  Response r2=new MinimalResponse(StatusCode.BAD_REQUEST);
  if (ErrorLogger.log(username,r1) && ErrorLogger.log(username,r2)) {
    assertEquals(StatusCode.BAD_REQUEST,ErrorLogger.getUserLog(username).get(0).getCode());
    assertEquals(StatusCode.BAD_REQUEST,ErrorLogger.getUserLog(username).get(1).getCode());
  }
 else {
    fail();
  }
  ErrorLogger.printUserLog("String_Node_Str");
}

Fixed version (ground truth):
@Test public void shouldLog2BADREQUESTErrors(){
  String username="String_Node_Str";
  Response r1=new MinimalResponse(StatusCode.BAD_REQUEST);
  Response r2=new MinimalResponse(StatusCode.BAD_REQUEST);
  ErrorLogger.printUserLog("String_Node_Str");
}
Program: 38160
Project: 38160
Buggy source:
@Test public void shouldLogBADREQUESTandOKResponse(){
  String username="String_Node_Str";
  Authenticate.addUser(username);
  Response r1=new MinimalResponse(StatusCode.BAD_REQUEST);
  Response r2=new MinimalResponse(StatusCode.OK);
  if (ErrorLogger.log(username,r1) && ErrorLogger.log(username,r2)) {
    assertEquals(StatusCode.BAD_REQUEST,ErrorLogger.getUserLog(username).get(0).getCode());
    assertEquals(StatusCode.OK,ErrorLogger.getUserLog(username).get(1).getCode());
    ErrorLogger.printUserLog("String_Node_Str");
  }
 else {
    fail();
  }
}

Fixed version (ground truth):
@Test public void shouldLogBADREQUESTandOKResponse(){
  String username="String_Node_Str";
  Authenticate.addUser(username);
  Response r1=new MinimalResponse(StatusCode.BAD_REQUEST);
  Response r2=new MinimalResponse(StatusCode.OK);
}
Program: 38161
Project: 38161
Buggy source:
@Test public void shouldValidateFalseWithoutAuthor(){
  String username="String_Node_Str";
  String expid="String_Node_Str";
  String processtype="String_Node_Str";
  String parameters="String_Node_Str" + "String_Node_Str" + "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str";
  String metadata="String_Node_Str";
  String genomeRelease="String_Node_Str";
  String author="String_Node_Str";
  CommandFactory cmdf=new CommandFactory();
  String json="String_Node_Str" + "String_Node_Str" + expid + "String_Node_Str"+ "String_Node_Str"+ processtype+ "String_Node_Str"+ "String_Node_Str"+ parameters+ "String_Node_Str"+ "String_Node_Str"+ metadata+ "String_Node_Str"+ "String_Node_Str"+ genomeRelease+ "String_Node_Str";
  ProcessCommand processCommand=(ProcessCommand)cmdf.createProcessCommand(json,username);
  assertFalse(processCommand.validate());
}

Fixed version (ground truth):
@Test public void shouldValidateFalseWithoutAuthor(){
  String username="String_Node_Str";
  String expid="String_Node_Str";
  String processtype="String_Node_Str";
  String parameters="String_Node_Str" + "String_Node_Str" + "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str";
  String metadata="String_Node_Str";
  String genomeRelease="String_Node_Str";
  String author="String_Node_Str";
  CommandFactory cmdf=new CommandFactory();
  String json="String_Node_Str" + "String_Node_Str" + expid + "String_Node_Str"+ "String_Node_Str"+ processtype+ "String_Node_Str"+ "String_Node_Str"+ parameters+ "String_Node_Str"+ "String_Node_Str"+ metadata+ "String_Node_Str"+ "String_Node_Str"+ genomeRelease+ "String_Node_Str";
  ProcessCommand processCommand=(ProcessCommand)cmdf.createProcessCommand(json,username,"String_Node_Str");
  assertFalse(processCommand.validate());
}
Program: 38162
Project: 38162
Buggy source:
@Test public void shouldValidateToFalseWhenEmptyGRversion(){
  String username="String_Node_Str";
  String expid="String_Node_Str";
  String processtype="String_Node_Str";
  String parameters="String_Node_Str" + "String_Node_Str" + "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str";
  String metadata="String_Node_Str";
  String genomeRelease="String_Node_Str";
  String author="String_Node_Str";
  CommandFactory cmdf=new CommandFactory();
  String json="String_Node_Str" + "String_Node_Str" + expid + "String_Node_Str"+ "String_Node_Str"+ processtype+ "String_Node_Str"+ "String_Node_Str"+ parameters+ "String_Node_Str"+ "String_Node_Str"+ metadata+ "String_Node_Str"+ "String_Node_Str"+ genomeRelease+ "String_Node_Str"+ "String_Node_Str"+ author+ "String_Node_Str";
  ProcessCommand processCommand=(ProcessCommand)cmdf.createProcessCommand(json,username);
  assertFalse(processCommand.validate());
}

Fixed version (ground truth):
@Test public void shouldValidateToFalseWhenEmptyGRversion(){
  String username="String_Node_Str";
  String expid="String_Node_Str";
  String processtype="String_Node_Str";
  String parameters="String_Node_Str" + "String_Node_Str" + "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str";
  String metadata="String_Node_Str";
  String genomeRelease="String_Node_Str";
  String author="String_Node_Str";
  CommandFactory cmdf=new CommandFactory();
  String json="String_Node_Str" + "String_Node_Str" + expid + "String_Node_Str"+ "String_Node_Str"+ processtype+ "String_Node_Str"+ "String_Node_Str"+ parameters+ "String_Node_Str"+ "String_Node_Str"+ metadata+ "String_Node_Str"+ "String_Node_Str"+ genomeRelease+ "String_Node_Str"+ "String_Node_Str"+ author+ "String_Node_Str";
  ProcessCommand processCommand=(ProcessCommand)cmdf.createProcessCommand(json,username,"String_Node_Str");
  assertFalse(processCommand.validate());
}
Program: 38163
Project: 38163
Buggy source:
@Test public void shouldValidateToFalseWhenRawToProfileandNot8ParametersGRversion(){
  String username="String_Node_Str";
  String expid="String_Node_Str";
  String processtype="String_Node_Str";
  String parameters="String_Node_Str" + "String_Node_Str" + "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str";
  String metadata="String_Node_Str";
  String genomeRelease="String_Node_Str";
  String author="String_Node_Str";
  CommandFactory cmdf=new CommandFactory();
  String json="String_Node_Str" + "String_Node_Str" + expid + "String_Node_Str"+ "String_Node_Str"+ processtype+ "String_Node_Str"+ "String_Node_Str"+ parameters+ "String_Node_Str"+ "String_Node_Str"+ metadata+ "String_Node_Str"+ "String_Node_Str"+ genomeRelease+ "String_Node_Str"+ "String_Node_Str"+ author+ "String_Node_Str";
  ProcessCommand processCommand=(ProcessCommand)cmdf.createProcessCommand(json,username);
  assertFalse(processCommand.validate());
}

Fixed version (ground truth):
@Test public void shouldValidateToFalseWhenRawToProfileandNot8ParametersGRversion(){
  String username="String_Node_Str";
  String expid="String_Node_Str";
  String processtype="String_Node_Str";
  String parameters="String_Node_Str" + "String_Node_Str" + "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str";
  String metadata="String_Node_Str";
  String genomeRelease="String_Node_Str";
  String author="String_Node_Str";
  CommandFactory cmdf=new CommandFactory();
  String json="String_Node_Str" + "String_Node_Str" + expid + "String_Node_Str"+ "String_Node_Str"+ processtype+ "String_Node_Str"+ "String_Node_Str"+ parameters+ "String_Node_Str"+ "String_Node_Str"+ metadata+ "String_Node_Str"+ "String_Node_Str"+ genomeRelease+ "String_Node_Str"+ "String_Node_Str"+ author+ "String_Node_Str";
  ProcessCommand processCommand=(ProcessCommand)cmdf.createProcessCommand(json,username,"String_Node_Str");
  assertFalse(processCommand.validate());
}
Program: 38164
Project: 38164
Buggy source:
@Test public void shouldValidateFalseWithoutMetadata(){
  String username="String_Node_Str";
  String expid="String_Node_Str";
  String processtype="String_Node_Str";
  String parameters="String_Node_Str" + "String_Node_Str" + "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str";
  String metadata="String_Node_Str";
  String genomeRelease="String_Node_Str";
  String author="String_Node_Str";
  CommandFactory cmdf=new CommandFactory();
  String json="String_Node_Str" + "String_Node_Str" + expid + "String_Node_Str"+ "String_Node_Str"+ processtype+ "String_Node_Str"+ "String_Node_Str"+ parameters+ "String_Node_Str"+ "String_Node_Str"+ genomeRelease+ "String_Node_Str"+ "String_Node_Str"+ author+ "String_Node_Str";
  ProcessCommand processCommand=(ProcessCommand)cmdf.createProcessCommand(json,username);
  assertFalse(processCommand.validate());
}

Fixed version (ground truth):
@Test public void shouldValidateFalseWithoutMetadata(){
  String username="String_Node_Str";
  String expid="String_Node_Str";
  String processtype="String_Node_Str";
  String parameters="String_Node_Str" + "String_Node_Str" + "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str";
  String metadata="String_Node_Str";
  String genomeRelease="String_Node_Str";
  String author="String_Node_Str";
  CommandFactory cmdf=new CommandFactory();
  String json="String_Node_Str" + "String_Node_Str" + expid + "String_Node_Str"+ "String_Node_Str"+ processtype+ "String_Node_Str"+ "String_Node_Str"+ parameters+ "String_Node_Str"+ "String_Node_Str"+ genomeRelease+ "String_Node_Str"+ "String_Node_Str"+ author+ "String_Node_Str";
  ProcessCommand processCommand=(ProcessCommand)cmdf.createProcessCommand(json,username,"String_Node_Str");
  assertFalse(processCommand.validate());
}
Program: 38165
Project: 38165
Buggy source:
@Test public void shouldValidateToTrueWhenEmptyMetadata(){
  String username="String_Node_Str";
  String expid="String_Node_Str";
  String processtype="String_Node_Str";
  String parameters="String_Node_Str" + "String_Node_Str" + "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str";
  String metadata="String_Node_Str";
  String genomeRelease="String_Node_Str";
  String author="String_Node_Str";
  CommandFactory cmdf=new CommandFactory();
  String json="String_Node_Str" + "String_Node_Str" + expid + "String_Node_Str"+ "String_Node_Str"+ processtype+ "String_Node_Str"+ "String_Node_Str"+ parameters+ "String_Node_Str"+ "String_Node_Str"+ metadata+ "String_Node_Str"+ "String_Node_Str"+ genomeRelease+ "String_Node_Str"+ "String_Node_Str"+ author+ "String_Node_Str";
  ProcessCommand processCommand=(ProcessCommand)cmdf.createProcessCommand(json,username);
  assertTrue(processCommand.validate());
}

Fixed version (ground truth):
@Test public void shouldValidateToTrueWhenEmptyMetadata(){
  String username="String_Node_Str";
  String expid="String_Node_Str";
  String processtype="String_Node_Str";
  String parameters="String_Node_Str" + "String_Node_Str" + "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str";
  String metadata="String_Node_Str";
  String genomeRelease="String_Node_Str";
  String author="String_Node_Str";
  CommandFactory cmdf=new CommandFactory();
  String json="String_Node_Str" + "String_Node_Str" + expid + "String_Node_Str"+ "String_Node_Str"+ processtype+ "String_Node_Str"+ "String_Node_Str"+ parameters+ "String_Node_Str"+ "String_Node_Str"+ metadata+ "String_Node_Str"+ "String_Node_Str"+ genomeRelease+ "String_Node_Str"+ "String_Node_Str"+ author+ "String_Node_Str";
  ProcessCommand processCommand=(ProcessCommand)cmdf.createProcessCommand(json,username,"String_Node_Str");
  assertTrue(processCommand.validate());
}
Program: 38166
Project: 38166
Buggy source:
@Test public void shouldValidateToTrueWhenRawToProfileand8ParametersGRversion(){
  String username="String_Node_Str";
  String expid="String_Node_Str";
  String processtype="String_Node_Str";
  String parameters="String_Node_Str" + "String_Node_Str" + "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str";
  String metadata="String_Node_Str";
  String genomeRelease="String_Node_Str";
  String author="String_Node_Str";
  CommandFactory cmdf=new CommandFactory();
  String json="String_Node_Str" + "String_Node_Str" + expid + "String_Node_Str"+ "String_Node_Str"+ processtype+ "String_Node_Str"+ "String_Node_Str"+ parameters+ "String_Node_Str"+ "String_Node_Str"+ metadata+ "String_Node_Str"+ "String_Node_Str"+ genomeRelease+ "String_Node_Str"+ "String_Node_Str"+ author+ "String_Node_Str";
  ProcessCommand processCommand=(ProcessCommand)cmdf.createProcessCommand(json,username);
  assertTrue(processCommand.validate());
}

Fixed version (ground truth):
@Test public void shouldValidateToTrueWhenRawToProfileand8ParametersGRversion(){
  String username="String_Node_Str";
  String expid="String_Node_Str";
  String processtype="String_Node_Str";
  String parameters="String_Node_Str" + "String_Node_Str" + "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str";
  String metadata="String_Node_Str";
  String genomeRelease="String_Node_Str";
  String author="String_Node_Str";
  CommandFactory cmdf=new CommandFactory();
  String json="String_Node_Str" + "String_Node_Str" + expid + "String_Node_Str"+ "String_Node_Str"+ processtype+ "String_Node_Str"+ "String_Node_Str"+ parameters+ "String_Node_Str"+ "String_Node_Str"+ metadata+ "String_Node_Str"+ "String_Node_Str"+ genomeRelease+ "String_Node_Str"+ "String_Node_Str"+ author+ "String_Node_Str";
  ProcessCommand processCommand=(ProcessCommand)cmdf.createProcessCommand(json,username,"String_Node_Str");
  assertTrue(processCommand.validate());
}
Program: 38167
Project: 38167
Buggy source:
@Test public void shouldValidateToFalseWhenEmptyUsername(){
  String username="String_Node_Str";
  String expid="String_Node_Str";
  String processtype="String_Node_Str";
  String parameters="String_Node_Str" + "String_Node_Str" + "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str";
  String metadata="String_Node_Str";
  String genomeRelease="String_Node_Str";
  String author="String_Node_Str";
  CommandFactory cmdf=new CommandFactory();
  String json="String_Node_Str" + "String_Node_Str" + expid + "String_Node_Str"+ "String_Node_Str"+ processtype+ "String_Node_Str"+ "String_Node_Str"+ parameters+ "String_Node_Str"+ "String_Node_Str"+ metadata+ "String_Node_Str"+ "String_Node_Str"+ genomeRelease+ "String_Node_Str"+ "String_Node_Str"+ author+ "String_Node_Str";
  ProcessCommand processCommand=(ProcessCommand)cmdf.createProcessCommand(json,username);
  assertFalse(processCommand.validate());
}

Fixed version (ground truth):
@Test public void shouldValidateToFalseWhenEmptyUsername(){
  String username="String_Node_Str";
  String expid="String_Node_Str";
  String processtype="String_Node_Str";
  String parameters="String_Node_Str" + "String_Node_Str" + "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str";
  String metadata="String_Node_Str";
  String genomeRelease="String_Node_Str";
  String author="String_Node_Str";
  CommandFactory cmdf=new CommandFactory();
  String json="String_Node_Str" + "String_Node_Str" + expid + "String_Node_Str"+ "String_Node_Str"+ processtype+ "String_Node_Str"+ "String_Node_Str"+ parameters+ "String_Node_Str"+ "String_Node_Str"+ metadata+ "String_Node_Str"+ "String_Node_Str"+ genomeRelease+ "String_Node_Str"+ "String_Node_Str"+ author+ "String_Node_Str";
  ProcessCommand processCommand=(ProcessCommand)cmdf.createProcessCommand(json,username,"String_Node_Str");
  assertFalse(processCommand.validate());
}
Program: 38168
Project: 38168
Buggy source:
@Test public void shouldValidateFalseWithoutGenomeRelease(){
  String username="String_Node_Str";
  String expid="String_Node_Str";
  String processtype="String_Node_Str";
  String parameters="String_Node_Str" + "String_Node_Str" + "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str";
  String metadata="String_Node_Str";
  String genomeRelease="String_Node_Str";
  String author="String_Node_Str";
  CommandFactory cmdf=new CommandFactory();
  String json="String_Node_Str" + "String_Node_Str" + expid + "String_Node_Str"+ "String_Node_Str"+ processtype+ "String_Node_Str"+ "String_Node_Str"+ parameters+ "String_Node_Str"+ "String_Node_Str"+ metadata+ "String_Node_Str"+ "String_Node_Str"+ author+ "String_Node_Str";
  ProcessCommand processCommand=(ProcessCommand)cmdf.createProcessCommand(json,username);
  assertFalse(processCommand.validate());
}

Fixed version (ground truth):
@Test public void shouldValidateFalseWithoutGenomeRelease(){
  String username="String_Node_Str";
  String expid="String_Node_Str";
  String processtype="String_Node_Str";
  String parameters="String_Node_Str" + "String_Node_Str" + "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str";
  String metadata="String_Node_Str";
  String genomeRelease="String_Node_Str";
  String author="String_Node_Str";
  CommandFactory cmdf=new CommandFactory();
  String json="String_Node_Str" + "String_Node_Str" + expid + "String_Node_Str"+ "String_Node_Str"+ processtype+ "String_Node_Str"+ "String_Node_Str"+ parameters+ "String_Node_Str"+ "String_Node_Str"+ metadata+ "String_Node_Str"+ "String_Node_Str"+ author+ "String_Node_Str";
  ProcessCommand processCommand=(ProcessCommand)cmdf.createProcessCommand(json,username,"String_Node_Str");
  assertFalse(processCommand.validate());
}
Program: 38169
Project: 38169
Buggy source:
@Test public void shouldValidateToTrueWhenEmptyAuthor(){
  String username="String_Node_Str";
  String expid="String_Node_Str";
  String processtype="String_Node_Str";
  String parameters="String_Node_Str" + "String_Node_Str" + "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str";
  String metadata="String_Node_Str";
  String genomeRelease="String_Node_Str";
  String author="String_Node_Str";
  CommandFactory cmdf=new CommandFactory();
  String json="String_Node_Str" + "String_Node_Str" + expid + "String_Node_Str"+ "String_Node_Str"+ processtype+ "String_Node_Str"+ "String_Node_Str"+ parameters+ "String_Node_Str"+ "String_Node_Str"+ metadata+ "String_Node_Str"+ "String_Node_Str"+ genomeRelease+ "String_Node_Str"+ "String_Node_Str"+ author+ "String_Node_Str";
  ProcessCommand processCommand=(ProcessCommand)cmdf.createProcessCommand(json,username);
  assertTrue(processCommand.validate());
}

Fixed version (ground truth):
@Test public void shouldValidateToTrueWhenEmptyAuthor(){
  String username="String_Node_Str";
  String expid="String_Node_Str";
  String processtype="String_Node_Str";
  String parameters="String_Node_Str" + "String_Node_Str" + "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str";
  String metadata="String_Node_Str";
  String genomeRelease="String_Node_Str";
  String author="String_Node_Str";
  CommandFactory cmdf=new CommandFactory();
  String json="String_Node_Str" + "String_Node_Str" + expid + "String_Node_Str"+ "String_Node_Str"+ processtype+ "String_Node_Str"+ "String_Node_Str"+ parameters+ "String_Node_Str"+ "String_Node_Str"+ metadata+ "String_Node_Str"+ "String_Node_Str"+ genomeRelease+ "String_Node_Str"+ "String_Node_Str"+ author+ "String_Node_Str";
  ProcessCommand processCommand=(ProcessCommand)cmdf.createProcessCommand(json,username,"String_Node_Str");
  assertTrue(processCommand.validate());
}
Program: 38170
Project: 38170
Buggy source:
@Test public void shouldValidateFalseWithoutParameters(){
  String username="String_Node_Str";
  String expid="String_Node_Str";
  String processtype="String_Node_Str";
  String parameters="String_Node_Str" + "String_Node_Str" + "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str";
  String metadata="String_Node_Str";
  String genomeRelease="String_Node_Str";
  String author="String_Node_Str";
  CommandFactory cmdf=new CommandFactory();
  String json="String_Node_Str" + "String_Node_Str" + expid + "String_Node_Str"+ "String_Node_Str"+ processtype+ "String_Node_Str"+ "String_Node_Str"+ metadata+ "String_Node_Str"+ "String_Node_Str"+ genomeRelease+ "String_Node_Str"+ "String_Node_Str"+ author+ "String_Node_Str";
  ProcessCommand processCommand=(ProcessCommand)cmdf.createProcessCommand(json,username);
  assertFalse(processCommand.validate());
}

Fixed version (ground truth):
@Test public void shouldValidateFalseWithoutParameters(){
  String username="String_Node_Str";
  String expid="String_Node_Str";
  String processtype="String_Node_Str";
  String parameters="String_Node_Str" + "String_Node_Str" + "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str";
  String metadata="String_Node_Str";
  String genomeRelease="String_Node_Str";
  String author="String_Node_Str";
  CommandFactory cmdf=new CommandFactory();
  String json="String_Node_Str" + "String_Node_Str" + expid + "String_Node_Str"+ "String_Node_Str"+ processtype+ "String_Node_Str"+ "String_Node_Str"+ metadata+ "String_Node_Str"+ "String_Node_Str"+ genomeRelease+ "String_Node_Str"+ "String_Node_Str"+ author+ "String_Node_Str";
  ProcessCommand processCommand=(ProcessCommand)cmdf.createProcessCommand(json,username,"String_Node_Str");
  assertFalse(processCommand.validate());
}
Program: 38171
Project: 38171
Buggy source:
@Test public void shouldValidateFalseWithoutProcesstype(){
  String username="String_Node_Str";
  String expid="String_Node_Str";
  String processtype="String_Node_Str";
  String parameters="String_Node_Str" + "String_Node_Str" + "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str";
  String metadata="String_Node_Str";
  String genomeRelease="String_Node_Str";
  String author="String_Node_Str";
  CommandFactory cmdf=new CommandFactory();
  String json="String_Node_Str" + "String_Node_Str" + expid + "String_Node_Str"+ "String_Node_Str"+ parameters+ "String_Node_Str"+ "String_Node_Str"+ metadata+ "String_Node_Str"+ "String_Node_Str"+ genomeRelease+ "String_Node_Str"+ "String_Node_Str"+ author+ "String_Node_Str";
  ProcessCommand processCommand=(ProcessCommand)cmdf.createProcessCommand(json,username);
  assertFalse(processCommand.validate());
}

Fixed version (ground truth):
@Test public void shouldValidateFalseWithoutProcesstype(){
  String username="String_Node_Str";
  String expid="String_Node_Str";
  String processtype="String_Node_Str";
  String parameters="String_Node_Str" + "String_Node_Str" + "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str"+ "String_Node_Str";
  String metadata="String_Node_Str";
  String genomeRelease="String_Node_Str";
  String author="String_Node_Str";
  CommandFactory cmdf=new CommandFactory();
  String json="String_Node_Str" + "String_Node_Str" + expid + "String_Node_Str"+ "String_Node_Str"+ parameters+ "String_Node_Str"+ "String_Node_Str"+ metadata+ "String_Node_Str"+ "String_Node_Str"+ genomeRelease+ "String_Node_Str"+ "String_Node_Str"+ author+ "String_Node_Str";
  ProcessCommand processCommand=(ProcessCommand)cmdf.createProcessCommand(json,username,"String_Node_Str");
  assertFalse(processCommand.validate());
}