Program: 136442
Project: 136442
Buggy source:
private void useCsvReader(File file,DelimitedFileConnection delimitedFileconnection,List<ModelElement> analysisElementList){
  int tableLimit=getLimit();
  int connLimit=JavaSqlFactory.getLimitValue(delimitedFileconnection);
  int limitValue=connLimit <= 0 ? tableLimit : (tableLimit < connLimit ? tableLimit : connLimit);
  int headValue=JavaSqlFactory.getHeadValue(delimitedFileconnection);
  CSVReader csvReader=null;
  try {
    csvReader=FileUtils.createCsvReader(file,delimitedFileconnection);
    FileUtils.initializeCsvReader(delimitedFileconnection,csvReader);
    int analysedColumnIndex[]=new int[analysisElementList.size()];
    MetadataColumn mColumn=(MetadataColumn)analysisElementList.get(0);
    MetadataTable metadataTable=ColumnHelper.getColumnOwnerAsMetadataTable(mColumn);
    EList<MetadataColumn> columns=metadataTable.getColumns();
    List<String> columnLabels=new ArrayList<String>();
    for (    MetadataColumn column : columns) {
      columnLabels.add(column.getLabel());
    }
    String[] analysedColumnName=new String[analysisElementList.size()];
    for (int j=0; j < analysisElementList.size(); j++) {
      analysedColumnName[j]=((MetadataColumn)analysisElementList.get(j)).getLabel();
      analysedColumnIndex[j]=columnLabels.indexOf(analysedColumnName[j]);
    }
    long currentRecord=0;
    while (csvReader.readNext()) {
      currentRecord++;
      if (currentRecord <= headValue) {
        limitValue++;
        continue;
      }
      if (limitValue != -1 && currentRecord > limitValue) {
        break;
      }
      String[] values=csvReader.getValues();
      String[] analysedValues=new String[analysisElementList.size()];
      for (int i=0; i < analysedColumnIndex.length; i++) {
        analysedValues[i]=values[analysedColumnIndex[i]];
      }
      handleRow(analysedValues);
    }
  }
 catch (  IOException e) {
    log.error(e.getMessage(),e);
  }
catch (  Exception e) {
    log.error(e.getMessage(),e);
  }
 finally {
    if (csvReader != null) {
      try {
        csvReader.close();
      }
 catch (      IOException e) {
        log.error(e.getMessage(),e);
      }
    }
  }
}

Fixed version (ground truth):
private void useCsvReader(File file,DelimitedFileConnection delimitedFileconnection,List<ModelElement> analysisElementList){
  int tableLimit=getLimit();
  int connLimit=JavaSqlFactory.getLimitValue(delimitedFileconnection);
  int limitValue=connLimit <= 0 ? tableLimit : (tableLimit < connLimit ? tableLimit : connLimit);
  int headValue=JavaSqlFactory.getHeadValue(delimitedFileconnection);
  CSVReader csvReader=null;
  try {
    csvReader=FileUtils.createCsvReader(file,delimitedFileconnection);
    FileUtils.initializeCsvReader(delimitedFileconnection,csvReader);
    int analysedColumnIndex[]=new int[analysisElementList.size()];
    MetadataColumn mColumn=(MetadataColumn)analysisElementList.get(0);
    MetadataTable metadataTable=ColumnHelper.getColumnOwnerAsMetadataTable(mColumn);
    EList<MetadataColumn> columns=metadataTable.getColumns();
    List<String> columnLabels=new ArrayList<String>();
    for (    MetadataColumn column : columns) {
      columnLabels.add(column.getLabel());
    }
    String[] analysedColumnName=new String[analysisElementList.size()];
    for (int j=0; j < analysisElementList.size(); j++) {
      analysedColumnName[j]=((MetadataColumn)analysisElementList.get(j)).getLabel();
      analysedColumnIndex[j]=columnLabels.indexOf(analysedColumnName[j]);
    }
    long currentRecord=0;
    while (csvReader.readNext()) {
      currentRecord++;
      if (currentRecord <= headValue) {
        limitValue++;
        continue;
      }
      if (limitValue != -1 && currentRecord > limitValue) {
        break;
      }
      String[] values=csvReader.getValues();
      String[] analysedValues=new String[analysisElementList.size()];
      for (int i=0; i < analysedColumnIndex.length; i++) {
        if (values.length <= i) {
          analysedValues[i]=StringUtils.EMPTY;
        }
 else {
          analysedValues[i]=values[analysedColumnIndex[i]];
        }
      }
      handleRow(analysedValues);
    }
  }
 catch (  IOException e) {
    log.error(e.getMessage(),e);
  }
catch (  Exception e) {
    log.error(e.getMessage(),e);
  }
 finally {
    if (csvReader != null) {
      try {
        csvReader.close();
      }
 catch (      IOException e) {
        log.error(e.getMessage(),e);
      }
    }
  }
}