Program: 96908
Project: 96908
Buggy source:
public static ArrayList<File> getJavaProjectProjectDependancies(IJavaProject javaProject){
  ArrayList<File> urls=new ArrayList<>();
  try {
    IClasspathEntry[] paths=localGetResolvedClasspath(javaProject);
    for (int i=0; i < paths.length; i++) {
      if (paths[i].getEntryKind() == IClasspathEntry.CPE_LIBRARY) {
        if (paths[i].getPath().toFile().exists()) {
        }
 else {
          File file=null;
          file=new File(AWorkspace.getWorkspacePath().concat(paths[i].getPath().toOSString()));
          if (file.exists()) {
            urls.add(file);
          }
        }
      }
 else       if (paths[i].getEntryKind() == IClasspathEntry.CPE_PROJECT) {
        urls.add(new File(AWorkspace.getWorkspacePath().concat(paths[i].getPath().toFile().getPath().concat(File.separator + "String_Node_Str" + File.separator))));
      }
 else       if (paths[i].getEntryKind() == IClasspathEntry.CPE_SOURCE) {
        File projectlocation=javaProject.getProject().getLocation().toFile();
        File projecttricky=javaProject.getProject().getFullPath().toFile();
        IPath output=paths[i].getOutputLocation();
        File fileLocation;
        if (output == null) {
          fileLocation=new File(paths[i].getPath().toFile().getPath().replace("String_Node_Str","String_Node_Str"));
        }
 else {
          fileLocation=paths[i].getOutputLocation().toFile();
        }
        String realLocation=fileLocation.toString().replace(projecttricky.toString(),projectlocation.toString());
        urls.add(new File(realLocation));
      }
    }
  }
 catch (  JavaModelException ex) {
    ex.printStackTrace();
  }
  return urls;
}

Fixed version (ground truth):
public static ArrayList<File> getJavaProjectProjectDependancies(IJavaProject javaProject){
  ArrayList<File> urls=new ArrayList<>();
  try {
    IClasspathEntry[] paths=localGetResolvedClasspath(javaProject);
    for (int i=0; i < paths.length; i++) {
      if (paths[i].getEntryKind() == IClasspathEntry.CPE_LIBRARY) {
        if (paths[i].getPath().toFile().exists()) {
        }
 else {
          File file=null;
          file=new File(AWorkspace.getWorkspacePath().concat(paths[i].getPath().toOSString()));
          if (file.exists()) {
            urls.add(file);
          }
        }
      }
 else       if (paths[i].getEntryKind() == IClasspathEntry.CPE_PROJECT) {
        urls.add(new File(AWorkspace.getWorkspacePath().concat(paths[i].getPath().toFile().getPath().concat(File.separator + "String_Node_Str" + File.separator))));
      }
 else       if (paths[i].getEntryKind() == IClasspathEntry.CPE_SOURCE) {
        File projectlocation=javaProject.getProject().getLocation().toFile();
        File projecttricky=javaProject.getProject().getFullPath().toFile();
        IPath output=paths[i].getOutputLocation();
        File fileLocation;
        if (output == null) {
          fileLocation=javaProject.getOutputLocation().toFile();
        }
 else {
          fileLocation=paths[i].getOutputLocation().toFile();
        }
        String realLocation=fileLocation.toString().replace(projecttricky.toString(),projectlocation.toString());
        urls.add(new File(realLocation));
      }
    }
  }
 catch (  JavaModelException ex) {
    ex.printStackTrace();
  }
  return urls;
}