Program: 45424
Project: 45424
Buggy source:
public static void initAll(){
  gardens.clear();
  List<Integer> existing_garden=dh.select_all_garden_pk();
  for (int i=0; i < existing_garden.size(); i++) {
    Garden temp1=dh.select_garden(existing_garden.get(i));
    temp1.setGardenNum(existing_garden.get(i));
    System.out.println("String_Node_Str" + existing_garden.get(i));
    gardens.add(temp1);
    List<Integer> existing_photo=dh.select_map_gp2_ph(existing_garden.get(i));
    for (int m=0; m < existing_photo.size(); m++) {
      Photo temp2=dh.select_photo(existing_photo.get(m));
      temp2.setPhotoNum(existing_photo.get(m));
      gardens.get(i).addImage(temp2);
      System.out.println("String_Node_Str" + existing_photo.get(m));
    }
    List<Integer> existing_plot=dh.select_map_gp_po(existing_garden.get(i));
    for (int j=0; j < existing_plot.size(); j++) {
      Plot temp2=dh.select_plot(existing_plot.get(j));
      temp2.setPlotNum(existing_plot.get(j));
      gardens.get(i).addPlot(temp2);
      System.out.println("String_Node_Str" + existing_plot.get(j));
      List<Integer> existing_plant=dh.select_map_pp_pa(existing_plot.get(j));
      for (int k=0; k < existing_plant.size(); k++) {
        Plant temp3=dh.select_plant(existing_plant.get(k));
        temp3.setPlantNum(existing_plant.get(k));
        gardens.get(i).getPlot(j).addPlant(temp3);
        System.out.println("String_Node_Str" + existing_plant.get(k));
        List<Integer> existing_entry=dh.select_map_pe_e(existing_plant.get(k));
        for (int l=0; l < existing_entry.size(); l++) {
          Entry temp4=dh.select_entry(existing_entry.get(l));
          temp4.setEntryNum(existing_entry.get(l));
          gardens.get(i).getPlot(j).getPlant(k).addEntry(temp4);
          System.out.println("String_Node_Str" + existing_entry.get(l));
        }
      }
    }
  }
}

Fixed version (ground truth):
public static void initAll(){
  gardens.clear();
  List<Integer> existing_garden=dh.select_all_garden_pk();
  for (int i=0; i < existing_garden.size(); i++) {
    Garden temp1=dh.select_garden(existing_garden.get(i));
    temp1.setGardenNum(existing_garden.get(i));
    System.out.println("String_Node_Str" + existing_garden.get(i));
    gardens.add(temp1);
    List<Integer> existing_photo=dh.select_map_gp2_ph(existing_garden.get(i));
    for (int m=0; m < existing_photo.size(); m++) {
      Photo temp2=dh.select_photo(existing_photo.get(m));
      temp2.setPhotoNum(existing_photo.get(m));
      gardens.get(i).addImage(temp2);
      System.out.println("String_Node_Str" + existing_photo.get(m));
    }
    List<Integer> existing_plot=dh.select_map_gp_po(existing_garden.get(i));
    for (int j=0; j < existing_plot.size(); j++) {
      Plot temp2=dh.select_plot(existing_plot.get(j));
      temp2.setPlotNum(existing_plot.get(j));
      gardens.get(i).addPlot(temp2);
      System.out.println("String_Node_Str" + i);
      System.out.println(temp2.getName() + "String_Node_Str" + temp2.getType()+ "String_Node_Str"+ temp2.getBounds().toString()+ "String_Node_Str"+ Arrays.toString(temp2.getPoints()));
      System.out.println("String_Node_Str" + existing_plot.get(j));
      List<Integer> existing_plant=dh.select_map_pp_pa(existing_plot.get(j));
      for (int k=0; k < existing_plant.size(); k++) {
        Plant temp3=dh.select_plant(existing_plant.get(k));
        temp3.setPlantNum(existing_plant.get(k));
        gardens.get(i).getPlot(j).addPlant(temp3);
        System.out.println("String_Node_Str" + existing_plant.get(k));
        List<Integer> existing_entry=dh.select_map_pe_e(existing_plant.get(k));
        for (int l=0; l < existing_entry.size(); l++) {
          Entry temp4=dh.select_entry(existing_entry.get(l));
          temp4.setEntryNum(existing_entry.get(l));
          gardens.get(i).getPlot(j).getPlant(k).addEntry(temp4);
          System.out.println("String_Node_Str" + existing_entry.get(l));
        }
      }
    }
  }
}