-- DBMS: snowflake
create or replace TABLE MASKED_SOMATIC_MUTATION_HG38_GDC_R34 (
	"project_short_name" VARCHAR(16777216),
	"case_barcode" VARCHAR(16777216),
	"primary_site" VARCHAR(16777216),
	"Hugo_Symbol" VARCHAR(16777216),
	"Entrez_Gene_Id" NUMBER(38,0),
	"Center" VARCHAR(16777216),
	"NCBI_Build" VARCHAR(16777216),
	"Chromosome" VARCHAR(16777216),
	"Start_Position" NUMBER(38,0),
	"End_Position" NUMBER(38,0),
	"Strand" VARCHAR(16777216),
	"Variant_Classification" VARCHAR(16777216),
	"Variant_Type" VARCHAR(16777216),
	"Reference_Allele" VARCHAR(16777216),
	"Tumor_Seq_Allele1" VARCHAR(16777216),
	"Tumor_Seq_Allele2" VARCHAR(16777216),
	"dbSNP_RS" VARCHAR(16777216),
	"dbSNP_Val_Status" VARCHAR(16777216),
	"Tumor_Aliquot_Barcode" VARCHAR(16777216),
	"Matched_Norm_Aliquot_Barcode" VARCHAR(16777216),
	"Match_Norm_Seq_Allele1" VARCHAR(16777216),
	"Match_Norm_Seq_Allele2" VARCHAR(16777216),
	"Tumor_Validation_Allele1" VARCHAR(16777216),
	"Tumor_Validation_Allele2" VARCHAR(16777216),
	"Match_Norm_Validation_Allele1" VARCHAR(16777216),
	"Match_Norm_Validation_Allele2" VARCHAR(16777216),
	"Verification_Status" VARCHAR(16777216),
	"Validation_Status" VARCHAR(16777216),
	"Mutation_Status" VARCHAR(16777216),
	"Sequencing_Phase" VARCHAR(16777216),
	"Sequence_Source" VARCHAR(16777216),
	"Validation_Method" VARCHAR(16777216),
	"Score" VARCHAR(16777216),
	"BAM_File" VARCHAR(16777216),
	"Sequencer" VARCHAR(16777216),
	"Tumor_Aliquot_UUID" VARCHAR(16777216),
	"Matched_Norm_Aliquot_UUID" VARCHAR(16777216),
	"HGVSc" VARCHAR(16777216),
	"HGVSp" VARCHAR(16777216),
	"HGVSp_Short" VARCHAR(16777216),
	"Transcript_ID" VARCHAR(16777216),
	"Exon_Number" VARCHAR(16777216),
	"t_depth" NUMBER(38,0),
	"t_ref_count" NUMBER(38,0),
	"t_alt_count" NUMBER(38,0),
	"n_depth" NUMBER(38,0),
	"n_ref_count" VARCHAR(16777216),
	"n_alt_count" VARCHAR(16777216),
	"all_effects" VARCHAR(16777216),
	"Allele" VARCHAR(16777216),
	"Gene" VARCHAR(16777216),
	"Feature" VARCHAR(16777216),
	"Feature_type" VARCHAR(16777216),
	"One_Consequence" VARCHAR(16777216),
	"Consequence" VARCHAR(16777216),
	"cDNA_position" VARCHAR(16777216),
	"CDS_position" VARCHAR(16777216),
	"Protein_position" VARCHAR(16777216),
	"Amino_acids" VARCHAR(16777216),
	"Codons" VARCHAR(16777216),
	"Existing_variation" VARCHAR(16777216),
	DISTANCE VARCHAR(16777216),
	TRANSCRIPT_STRAND VARCHAR(16777216),
	SYMBOL VARCHAR(16777216),
	SYMBOL_SOURCE VARCHAR(16777216),
	HGNC_ID VARCHAR(16777216),
	BIOTYPE VARCHAR(16777216),
	CANONICAL VARCHAR(16777216),
	CCDS VARCHAR(16777216),
	ENSP VARCHAR(16777216),
	SWISSPROT VARCHAR(16777216),
	TREMBL VARCHAR(16777216),
	UNIPARC VARCHAR(16777216),
	UNIPROT_ISOFORM VARCHAR(16777216),
	"RefSeq" VARCHAR(16777216),
	MANE VARCHAR(16777216),
	APPRIS VARCHAR(16777216),
	FLAGS VARCHAR(16777216),
	SIFT VARCHAR(16777216),
	"PolyPhen" VARCHAR(16777216),
	EXON VARCHAR(16777216),
	INTRON VARCHAR(16777216),
	DOMAINS VARCHAR(16777216),
	"ThousG_AF" FLOAT,
	"ThousG_AFR_AF" FLOAT,
	"ThousG_AMR_AF" FLOAT,
	"ThousG_EAS_AF" FLOAT,
	"ThousG_EUR_AF" FLOAT,
	"ThousG_SAS_AF" FLOAT,
	ESP_AA_AF FLOAT,
	ESP_EA_AF FLOAT,
	"gnomAD_AF" FLOAT,
	"gnomAD_AFR_AF" FLOAT,
	"gnomAD_AMR_AF" FLOAT,
	"gnomAD_ASJ_AF" FLOAT,
	"gnomAD_EAS_AF" FLOAT,
	"gnomAD_FIN_AF" FLOAT,
	"gnomAD_NFE_AF" FLOAT,
	"gnomAD_OTH_AF" FLOAT,
	"gnomAD_SAS_AF" FLOAT,
	MAX_AF FLOAT,
	MAX_AF_POPS VARCHAR(16777216),
	"gnomAD_non_cancer_AF" FLOAT,
	"gnomAD_non_cancer_AFR_AF" FLOAT,
	"gnomAD_non_cancer_AMI_AF" FLOAT,
	"gnomAD_non_cancer_AMR_AF" FLOAT,
	"gnomAD_non_cancer_ASJ_AF" FLOAT,
	"gnomAD_non_cancer_EAS_AF" FLOAT,
	"gnomAD_non_cancer_FIN_AF" FLOAT,
	"gnomAD_non_cancer_MID_AF" FLOAT,
	"gnomAD_non_cancer_NFE_AF" FLOAT,
	"gnomAD_non_cancer_OTH_AF" FLOAT,
	"gnomAD_non_cancer_SAS_AF" FLOAT,
	"gnomAD_non_cancer_MAX_AF_adj" FLOAT,
	"gnomAD_non_cancer_MAX_AF_POPS_adj" VARCHAR(16777216),
	CLIN_SIG VARCHAR(16777216),
	SOMATIC VARCHAR(16777216),
	PUBMED VARCHAR(16777216),
	TRANSCRIPTION_FACTORS VARCHAR(16777216),
	MOTIF_NAME VARCHAR(16777216),
	MOTIF_POS VARCHAR(16777216),
	HIGH_INF_POS VARCHAR(16777216),
	MOTIF_SCORE_CHANGE VARCHAR(16777216),
	"miRNA" VARCHAR(16777216),
	IMPACT VARCHAR(16777216),
	PICK VARCHAR(16777216),
	VARIANT_CLASS VARCHAR(16777216),
	TSL VARCHAR(16777216),
	HGVS_OFFSET VARCHAR(16777216),
	PHENO VARCHAR(16777216),
	GENE_PHENO VARCHAR(16777216),
	CONTEXT VARCHAR(16777216),
	"tumor_submitter_uuid" VARCHAR(16777216),
	"normal_submitter_uuid" VARCHAR(16777216),
	"case_id" VARCHAR(16777216),
	GDC_FILTER VARCHAR(16777216),
	COSMIC VARCHAR(16777216),
	"hotspot" BOOLEAN,
	"RNA_Support" VARCHAR(16777216),
	"RNA_depth" VARCHAR(16777216),
	"RNA_ref_count" VARCHAR(16777216),
	"RNA_alt_count" VARCHAR(16777216),
	"callers" VARCHAR(16777216),
	"file_gdc_id" VARCHAR(16777216),
	"muse" VARCHAR(16777216),
	"mutect2" VARCHAR(16777216),
	"pindel" VARCHAR(16777216),
	"somaticsniper" VARCHAR(16777216),
	"varscan2" VARCHAR(16777216),
	"sample_barcode_tumor" VARCHAR(16777216),
	"sample_barcode_normal" VARCHAR(16777216),
	"aliquot_barcode_tumor" VARCHAR(16777216),
	"aliquot_barcode_normal" VARCHAR(16777216)
);

INSERT INTO "TCGA"."TCGA_VERSIONED"."MASKED_SOMATIC_MUTATION_HG38_GDC_R34" (CLIN_SIG, Exon_Number, all_effects, gnomAD_NFE_AF, Sequencing_Phase, mutect2, UNIPARC, n_ref_count, Tumor_Aliquot_Barcode, Sequence_Source, Verification_Status, GDC_FILTER, aliquot_barcode_tumor, RNA_alt_count, HGVSp, Tumor_Seq_Allele1, Center, gnomAD_non_cancer_EAS_AF, primary_site, EXON, Feature, Tumor_Validation_Allele1, pindel, Reference_Allele, ThousG_AFR_AF, TRANSCRIPT_STRAND, MOTIF_SCORE_CHANGE, ESP_EA_AF, Validation_Status, ThousG_EAS_AF, Protein_position, CANONICAL, cDNA_position, Matched_Norm_Aliquot_Barcode, PolyPhen, gnomAD_non_cancer_MID_AF, n_alt_count, gnomAD_non_cancer_AF, ENSP, Tumor_Aliquot_UUID, CCDS, gnomAD_non_cancer_AMI_AF, SYMBOL, Strand, IMPACT, gnomAD_SAS_AF, gnomAD_non_cancer_FIN_AF, Entrez_Gene_Id, HGVSp_Short, gnomAD_AF, SIFT, dbSNP_RS, NCBI_Build, ThousG_AF, HGVSc, muse, SOMATIC, tumor_submitter_uuid, Match_Norm_Seq_Allele1, varscan2, PHENO, file_gdc_id, ThousG_EUR_AF, VARIANT_CLASS, case_barcode, gnomAD_non_cancer_NFE_AF, Gene, DOMAINS, gnomAD_non_cancer_OTH_AF, Start_Position, Chromosome, SWISSPROT, gnomAD_non_cancer_AMR_AF, hotspot, Tumor_Seq_Allele2, gnomAD_AMR_AF, BAM_File, PUBMED, MOTIF_NAME, normal_submitter_uuid, aliquot_barcode_normal, case_id, Sequencer, CDS_position, t_depth, gnomAD_EAS_AF, callers, gnomAD_non_cancer_MAX_AF_POPS_adj, Match_Norm_Validation_Allele2, gnomAD_non_cancer_AFR_AF, ThousG_SAS_AF, Tumor_Validation_Allele2, End_Position, gnomAD_AFR_AF, gnomAD_OTH_AF, t_alt_count, gnomAD_ASJ_AF, RNA_depth, MOTIF_POS, miRNA, CONTEXT, BIOTYPE, Transcript_ID, Feature_type, Validation_Method, TSL, One_Consequence, MANE, TRANSCRIPTION_FACTORS, Amino_acids, SYMBOL_SOURCE, HGNC_ID, GENE_PHENO, ThousG_AMR_AF, PICK, COSMIC, Variant_Classification, HGVS_OFFSET, UNIPROT_ISOFORM, MAX_AF_POPS, gnomAD_non_cancer_ASJ_AF, FLAGS, n_depth, sample_barcode_normal, Existing_variation, project_short_name, RNA_Support, gnomAD_non_cancer_MAX_AF_adj, sample_barcode_tumor, ESP_AA_AF, RNA_ref_count, Hugo_Symbol, Consequence, APPRIS, MAX_AF, DISTANCE, Variant_Type, Matched_Norm_Aliquot_UUID, INTRON, Match_Norm_Validation_Allele1, RefSeq, gnomAD_FIN_AF, t_ref_count, gnomAD_non_cancer_SAS_AF, Score, Allele, dbSNP_Val_Status, Codons, Match_Norm_Seq_Allele2, TREMBL, somaticsniper, Mutation_Status, HIGH_INF_POS) VALUES (NULL, '5/12', 'PRMT9,stop_gained,p.E264*,ENST00000322396,NM_001350143.1&NM_001350144.1&NM_001350141.1&NM_001304458.1&NM_001350142.1&NM_138364.4,c.790G>T,HIGH,YES,,,-1;TMEM184C,intron_variant,,ENST00000508208,,c.780-1170C>A,MODIFIER,,,,1;PRMT9,3_prime_UTR_variant,,ENST00000514886,,c.*440G>T,MODIFIER,,,,-1', NULL, NULL, 'Yes', 'UPI000004971D', NULL, 'TCGA-B5-A0JY-01A-11D-A10B-09', NULL, NULL, NULL, 'TCGA-B5-A0JY-01A-11D-A10B-09', NULL, 'p.Glu264Ter', 'C', 'WUGSC', NULL, 'Corpus uteri', '5/12', 'ENST00000322396', NULL, 'No', 'C', NULL, '-1', NULL, NULL, NULL, NULL, '264/845', 'YES', '966/3461', 'TCGA-B5-A0JY-10A-01D-A10O-09', NULL, NULL, NULL, NULL, 'ENSP00000314396', '5b7c3959-a2be-493e-abe2-ab19eecb946f', 'CCDS3771.1', NULL, 'PRMT9', '+', 'HIGH', NULL, NULL, 90826, 'p.E264*', NULL, NULL, NULL, 'GRCh38', NULL, 'c.790G>T', 'Yes', '1', 'c12dd9a6-5939-483c-9ced-c34dd3bd3d6d', NULL, 'Yes', '1', '6bdadc76-9ea5-4cc2-8999-6e3d27d91a5f', NULL, 'SNV', 'TCGA-B5-A0JY', NULL, 'ENSG00000164169', 'PDB-ENSP_mappings:6pdm.A;PROSITE_profiles:PS51678;PANTHER:PTHR11006;PANTHER:PTHR11006:SF60;Gene3D:3.40.50.150;Superfamily:SSF53335', NULL, 147670697, 'chr4', 'Q6P2P2.149', NULL, False, 'A', NULL, NULL, NULL, NULL, '911820f0-d3ec-4d51-82a6-de0dae8d69a6', 'TCGA-B5-A0JY-10A-01D-A10O-09', '61935424-44d0-4211-81c1-c925e436eac5', NULL, '790/2538', 300, NULL, 'muse;mutect2;varscan2', NULL, NULL, NULL, NULL, NULL, 147670697, NULL, NULL, 102, NULL, NULL, NULL, NULL, 'TCCTTCTCCAA', 'protein_coding', 'ENST00000322396', 'Transcript', NULL, '1', 'stop_gained', 'NM_138364.4', NULL, 'E/*', 'HGNC', 'HGNC:25099', '1', NULL, '1', 'COSM1051858', 'Nonsense_Mutation', NULL, 'Q6P2P2-1', NULL, NULL, NULL, 177, 'TCGA-B5-A0JY-10A', 'COSV59359051', 'TCGA-UCEC', 'Unknown', NULL, 'TCGA-B5-A0JY-01A', NULL, NULL, 'PRMT9', 'stop_gained', 'P1', NULL, NULL, 'SNP', 'ccebab6c-dffb-431e-9bce-bdd0c824ebf4', NULL, NULL, 'NM_001350143.1;NM_001350144.1;NM_001350141.1;NM_001304458.1;NM_001350142.1;NM_138364.4', NULL, 198, NULL, NULL, 'A', NULL, 'Gaa/Taa', NULL, NULL, 'No', 'Somatic', NULL), (NULL, '10/21', 'SIPA1L2,missense_variant,p.R1139I,ENST00000674749,,c.3416G>T,MODERATE,,deleterious(0.01),possibly_damaging(0.498),-1;SIPA1L2,missense_variant,p.R1139I,ENST00000674635,NM_020808.5,c.3416G>T,MODERATE,,deleterious(0),benign(0.006),-1;SIPA1L2,missense_variant,p.R1139I,ENST00000675407,,c.3416G>T,MODERATE,,deleterious(0.01),possibly_damaging(0.498),-1;SIPA1L2,missense_variant,p.R1139I,ENST00000676213,,c.3416G>T,MODERATE,YES,deleterious(0.01),benign(0.378),-1;SIPA1L2,missense_variant,p.R1139I,ENST00000366630,,c.3416G>T,MODERATE,,deleterious(0),benign(0.006),-1;SIPA1L2,missense_variant,p.R1139I,ENST00000675685,NM_001377488.1,c.3416G>T,MODERATE,,deleterious(0.01),possibly_damaging(0.498),-1;SIPA1L2,missense_variant,p.R1139I,ENST00000262861,,c.3416G>T,MODERATE,,deleterious(0),benign(0.006),-1;SIPA1L2,missense_variant,p.R213I,ENST00000308942,,c.638G>T,MODERATE,,deleterious(0.01),possibly_damaging(0.753),-1;SIPA1L2,3_prime_UTR_variant,,ENST00000674801,,c.*1038G>T,MODIFIER,,,,-1', NULL, NULL, 'Yes', 'UPI00001D7D6A', NULL, 'TCGA-B5-A0JY-01A-11D-A10B-09', NULL, NULL, NULL, 'TCGA-B5-A0JY-01A-11D-A10B-09', NULL, 'p.Arg1139Ile', 'C', 'WUGSC', NULL, 'Corpus uteri', '10/21', 'ENST00000262861', NULL, 'No', 'C', NULL, '-1', NULL, NULL, NULL, NULL, '1139/1722', NULL, '3643/6555', 'TCGA-B5-A0JY-10A-01D-A10O-09', 'benign(0.006)', NULL, NULL, NULL, 'ENSP00000262861', '5b7c3959-a2be-493e-abe2-ab19eecb946f', 'CCDS41474.1', NULL, 'SIPA1L2', '+', 'MODERATE', NULL, NULL, 57568, 'p.R1139I', NULL, 'deleterious(0)', NULL, 'GRCh38', NULL, 'c.3416G>T', 'Yes', '1', 'c12dd9a6-5939-483c-9ced-c34dd3bd3d6d', NULL, 'Yes', '1', '6bdadc76-9ea5-4cc2-8999-6e3d27d91a5f', NULL, 'SNV', 'TCGA-B5-A0JY', NULL, 'ENSG00000116991', 'PANTHER:PTHR15711;PANTHER:PTHR15711:SF7', NULL, 232443623, 'chr1', 'Q9P2F8.158', NULL, False, 'A', NULL, NULL, NULL, NULL, '911820f0-d3ec-4d51-82a6-de0dae8d69a6', 'TCGA-B5-A0JY-10A-01D-A10O-09', '61935424-44d0-4211-81c1-c925e436eac5', NULL, '3416/5169', 221, NULL, 'muse;mutect2;varscan2', NULL, NULL, NULL, NULL, NULL, 232443623, NULL, NULL, 69, NULL, NULL, NULL, NULL, 'GTGGTCTCCAG', 'protein_coding', 'ENST00000262861', 'Transcript', NULL, '1', 'missense_variant', NULL, NULL, 'R/I', 'HGNC', 'HGNC:23800', NULL, NULL, NULL, 'COSM4869771;COSM905573', 'Missense_Mutation', NULL, 'Q9P2F8-1', NULL, NULL, NULL, 169, 'TCGA-B5-A0JY-10A', 'COSV53385903', 'TCGA-UCEC', 'Unknown', NULL, 'TCGA-B5-A0JY-01A', NULL, NULL, 'SIPA1L2', 'missense_variant', 'P2', NULL, NULL, 'SNP', 'ccebab6c-dffb-431e-9bce-bdd0c824ebf4', NULL, NULL, NULL, NULL, 152, NULL, NULL, 'A', NULL, 'aGa/aTa', NULL, NULL, 'No', 'Somatic', NULL), (NULL, '23/25', 'SIDT1,missense_variant,p.F762L,ENST00000264852,NM_001322299.2&NM_017699.3,c.2286C>A,MODERATE,,tolerated(0.17),benign(0.262),1;SIDT1,missense_variant,p.F767L,ENST00000393830,NM_001308350.1&NM_001322294.2&NM_001322298.2&NM_001322295.2&NM_001322300.2&NM_001322296.2&NM_001322297.2,c.2301C>A,MODERATE,YES,tolerated(0.17),benign(0.237),1;SIDT1,non_coding_transcript_exon_variant,,ENST00000463226,,n.1140C>A,MODIFIER,,,,1;SIDT1,downstream_gene_variant,,ENST00000481891,,,MODIFIER,,,,1;SIDT1,upstream_gene_variant,,ENST00000498152,,,MODIFIER,,,,1', NULL, NULL, 'Yes', 'UPI000013D581', NULL, 'TCGA-B5-A0JY-01A-11D-A10B-09', NULL, NULL, NULL, 'TCGA-B5-A0JY-01A-11D-A10B-09', NULL, 'p.Phe762Leu', 'C', 'WUGSC', NULL, 'Corpus uteri', '23/25', 'ENST00000264852', NULL, 'No', 'C', NULL, '1', NULL, NULL, NULL, NULL, '762/827', NULL, '2753/4818', 'TCGA-B5-A0JY-10A-01D-A10O-09', 'benign(0.262)', NULL, NULL, NULL, 'ENSP00000264852', '5b7c3959-a2be-493e-abe2-ab19eecb946f', 'CCDS2974.1', NULL, 'SIDT1', '+', 'MODERATE', NULL, NULL, 54847, 'p.F762L', NULL, 'tolerated(0.17)', NULL, 'GRCh38', NULL, 'c.2286C>A', 'Yes', '1', 'c12dd9a6-5939-483c-9ced-c34dd3bd3d6d', NULL, 'Yes', '1', '6bdadc76-9ea5-4cc2-8999-6e3d27d91a5f', NULL, 'SNV', 'TCGA-B5-A0JY', NULL, 'ENSG00000072858', 'Pfam:PF13965;PANTHER:PTHR12185;PANTHER:PTHR12185:SF15;Transmembrane_helices:TMhelix', NULL, 113623712, 'chr3', 'Q9NXL6.122', NULL, False, 'A', NULL, NULL, NULL, NULL, '911820f0-d3ec-4d51-82a6-de0dae8d69a6', 'TCGA-B5-A0JY-10A-01D-A10O-09', '61935424-44d0-4211-81c1-c925e436eac5', NULL, '2286/2484', 171, NULL, 'muse;mutect2;varscan2', NULL, NULL, NULL, NULL, NULL, 113623712, NULL, NULL, 58, NULL, NULL, NULL, NULL, 'TTCTTCCAGAA', 'protein_coding', 'ENST00000264852', 'Transcript', NULL, '2', 'missense_variant', 'NM_017699.3', NULL, 'F/L', 'HGNC', 'HGNC:25967', NULL, NULL, NULL, 'COSM1036512', 'Missense_Mutation', NULL, 'Q9NXL6-1', NULL, NULL, NULL, 111, 'TCGA-B5-A0JY-10A', 'COSV53499459', 'TCGA-UCEC', 'Unknown', NULL, 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'5b7c3959-a2be-493e-abe2-ab19eecb946f', 'CCDS9723.1', NULL, 'DLGAP5', '+', 'MODERATE', NULL, NULL, 9787, 'p.S787Y', NULL, 'tolerated(0.31)', NULL, 'GRCh38', NULL, 'c.2360C>A', 'Yes', '1', 'c12dd9a6-5939-483c-9ced-c34dd3bd3d6d', NULL, 'Yes', '1', '6bdadc76-9ea5-4cc2-8999-6e3d27d91a5f', NULL, 'SNV', 'TCGA-B5-A0JY', NULL, 'ENSG00000126787', NULL, NULL, 55151703, 'chr14', 'Q15398.170', NULL, False, 'T', NULL, NULL, NULL, NULL, '911820f0-d3ec-4d51-82a6-de0dae8d69a6', 'TCGA-B5-A0JY-10A-01D-A10O-09', '61935424-44d0-4211-81c1-c925e436eac5', NULL, '2360/2541', 112, NULL, 'muse;mutect2;varscan2', NULL, NULL, NULL, NULL, NULL, 55151703, NULL, NULL, 37, NULL, NULL, NULL, NULL, 'ACTGAGAAATT', 'protein_coding', 'ENST00000247191', 'Transcript', NULL, '1', 'missense_variant', 'NM_014750.5', NULL, 'S/Y', 'HGNC', 'HGNC:16864', NULL, NULL, '1', 'COSM956350', 'Missense_Mutation', NULL, 'Q15398-2', NULL, NULL, NULL, 118, 'TCGA-B5-A0JY-10A', 'COSV55962555', 'TCGA-UCEC', 'Unknown', NULL, 'TCGA-B5-A0JY-01A', 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