-- DBMS: bigquery
CREATE TABLE `isb-cgc-bq.HTAN_versioned.imaging_level4_Duke_mibi_r4`
(
  Point_Num INT64 OPTIONS(description="Unique integer associated with a single point, or Field of View (FOV)."),
  HTAN_Parent_Data_File_ID STRING OPTIONS(description="HTAN Data File Identifier indicating the file(s) from which these files were derived"),
  event INT64 OPTIONS(description="Unique integer associated with a segmented cell for a point."),
  CohortNumber INT64 OPTIONS(description="An integer representing a participant in the cohort."),
  cell_size FLOAT64 OPTIONS(description="Size of cell"),
  COLI FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  CD14 FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  P63 FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  Background FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  pS6 FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  Ta FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  CD4 FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  Au FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  HLADRDPDQ FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  ECADKRTCD45 FLOAT64 OPTIONS(description="Normalized expression value of combination of markers ECAD, PanKRT, and CD45. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  Nuc FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  GZMB FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  ECADKRTCD45GLUT1CD44 FLOAT64 OPTIONS(description="Normalized expression value of the combination of markers ECAD, PanKRT, GLUT1, CD44, and CD45 See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  Tryptase FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  ECAD FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  ECADKRTCD45GLUT1 FLOAT64 OPTIONS(description="Normalized expression value of a combination of markers ECAD, PanKRT, GLUT1 and CD45 See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  AR FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  GLUT1 FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  MPO FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  VIM FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  CD3 FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  SMA FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  CD56 FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  PanKRT FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  CD11c FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  HER2 FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  CD68 FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  P FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  CK7 FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  CD8 FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  Na FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  C FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  PD1 FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  CD44 FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  HIF1a FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  CD45 FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  X140empty FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  FAP FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  PDL1 FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  MMP9 FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  Ki67 FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  CK5 FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  COX2 FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  CD20 FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  FOXP3 FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  IDO1 FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  CD36 FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  ECADKRT FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  HH3 FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  ER FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  Ca40 FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  CD31 FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  CK5norm FLOAT64 OPTIONS(description="Normalized expression value of given marker. See published study https://doi.org/10.1016/j.cell.2021.12.023, including Table S2."),
  label INT64 OPTIONS(description="Unique integer label for a cell"),
  area INT64 OPTIONS(description="Area of the cell in pixels"),
  eccentricity FLOAT64 OPTIONS(description="Eccentricity of the ellipse that has the same second-moments as the region, returned as a scalar. The eccentricity is the ratio of the distance between the foci of the ellipse and its major axis length. The value is between 0 and 1. (0 and 1 are degenerate cases. An ellipse whose eccentricity is 0 is actually a circle, while an ellipse whose eccentricity is 1 is a line segment.)"),
  major_axis_length FLOAT64 OPTIONS(description="Length (in pixels) of the major axis of the ellipse that has the same normalized second central moments as the region, returned as a scalar"),
  minor_axis_length FLOAT64 OPTIONS(description="Length (in pixels) of the minor axis of the ellipse that has the same normalized second central moments as the region, returned as a scalar"),
  perimeter FLOAT64 OPTIONS(description="Distance around the boundary of the region returned as a scalar"),
  Tissue_Type STRING OPTIONS(description="Text describing the type of normal, precancer, or malignant tissue, with possible values DCIS,IBC,lobular,normal"),
  Status STRING OPTIONS(description="Text indicating case control status with values case,ctrl,ipsinv,normal"),
  Tissue STRING OPTIONS(description="Text describing the type of normal, precancer, or malignant tissue with values DCIS,NewInv,normal"),
  sublineage STRING OPTIONS(description="Text describing cell lineage - detailed"),
  phenotype STRING OPTIONS(description="Text describing inferred cellular phenotype"),
  compartment STRING OPTIONS(description="Text describing overall compartment of cell, with values epithelial,other,stroma"),
  celllineage STRING OPTIONS(description="Text describing cell lineage - overall categories with values endo,fibroblast,immune,myoep,other,tumor"),
  sublineage_code INT64 OPTIONS(description="\"sublineage\" value coded as an integer"),
  phenotype_code INT64 OPTIONS(description="\"phenotype\" value coded as an integer"),
  compartment_code INT64 OPTIONS(description="\"compartment\" value coded as an integer"),
  celllineage_code INT64 OPTIONS(description="\"celllineage\" value coded as an integer"),
  manual_gating_cellineage STRING OPTIONS(description="Cell lineage from manual gating, as described in https://doi.org/10.1016/j.cell.2021.12.023"),
  manual_gating_subineage STRING OPTIONS(description="Cell sublineage from manual gating, as described in https://doi.org/10.1016/j.cell.2021.12.023"),
  manual_gating_phenotype STRING OPTIONS(description="Cell phenotype from manual gating, as described in https://doi.org/10.1016/j.cell.2021.12.023"),
  innerduct_mask INT64 OPTIONS(description="Presence (1) or absence (0) of the specified mask marker as described in https://doi.org/10.1016/j.cell.2021.12.023"),
  distal_mask INT64 OPTIONS(description="Presence (1) or absence (0) of the specified mask marker as described in https://doi.org/10.1016/j.cell.2021.12.023"),
  stroma_mask INT64 OPTIONS(description="Presence (1) or absence (0) of the specified mask marker as described in https://doi.org/10.1016/j.cell.2021.12.023"),
  periph_mask INT64 OPTIONS(description="Presence (1) or absence (0) of the specified mask marker as described in https://doi.org/10.1016/j.cell.2021.12.023"),
  epi_mask INT64 OPTIONS(description="Presence (1) or absence (0) of the specified mask marker as described in https://doi.org/10.1016/j.cell.2021.12.023"),
  duct_mask INT64 OPTIONS(description="Presence (1) or absence (0) of the specified mask marker as described in https://doi.org/10.1016/j.cell.2021.12.023"),
  myoep_mask INT64 OPTIONS(description="Presence (1) or absence (0) of the specified mask marker as described in https://doi.org/10.1016/j.cell.2021.12.023"),
  ERstatus INT64 OPTIONS(description="Presence (1) or absence (0) of the given marker as described in https://doi.org/10.1016/j.cell.2021.12.023"),
  HER2status INT64 OPTIONS(description="Presence (1) or absence (0) of the given marker as described in https://doi.org/10.1016/j.cell.2021.12.024"),
  ARstatus INT64 OPTIONS(description="Presence (1) or absence (0) of the given marker as described in https://doi.org/10.1016/j.cell.2021.12.025"),
  Ki67status INT64 OPTIONS(description="Presence (1) or absence (0) of the given marker as described in https://doi.org/10.1016/j.cell.2021.12.026"),
  pS6status INT64 OPTIONS(description="Presence (1) or absence (0) of the given marker as described in https://doi.org/10.1016/j.cell.2021.12.027"),
  GLUT1status INT64 OPTIONS(description="Presence (1) or absence (0) of the given marker as described in https://doi.org/10.1016/j.cell.2021.12.028"),
  HIF1astatus INT64 OPTIONS(description="Presence (1) or absence (0) of the given marker as described in https://doi.org/10.1016/j.cell.2021.12.029"),
  COX2status INT64 OPTIONS(description="Presence (1) or absence (0) of the given marker as described in https://doi.org/10.1016/j.cell.2021.12.030"),
  CD36status INT64 OPTIONS(description="Presence (1) or absence (0) of the given marker as described in https://doi.org/10.1016/j.cell.2021.12.031"),
  CD44status INT64 OPTIONS(description="Presence (1) or absence (0) of the given marker as described in https://doi.org/10.1016/j.cell.2021.12.032"),
  PD1status INT64 OPTIONS(description="Presence (1) or absence (0) of the given marker as described in https://doi.org/10.1016/j.cell.2021.12.033"),
  PDL1status INT64 OPTIONS(description="Presence (1) or absence (0) of the given marker as described in https://doi.org/10.1016/j.cell.2021.12.034"),
  IDO1status INT64 OPTIONS(description="Presence (1) or absence (0) of the given marker as described in https://doi.org/10.1016/j.cell.2021.12.035"),
  GZMBstatus INT64 OPTIONS(description="Presence (1) or absence (0) of the given marker as described in https://doi.org/10.1016/j.cell.2021.12.036"),
  ECADstatus INT64 OPTIONS(description="Presence (1) or absence (0) of the given marker as described in https://doi.org/10.1016/j.cell.2021.12.037"),
  MMP9status INT64 OPTIONS(description="Presence (1) or absence (0) of the given marker as described in https://doi.org/10.1016/j.cell.2021.12.038"),
  VIMstatus INT64 OPTIONS(description="Presence (1) or absence (0) of the given marker as described in https://doi.org/10.1016/j.cell.2021.12.039"),
  FAPstatus INT64 OPTIONS(description="Presence (1) or absence (0) of the given marker as described in https://doi.org/10.1016/j.cell.2021.12.040"),
  HLADRstatus INT64 OPTIONS(description="Presence (1) or absence (0) of the given marker as described in https://doi.org/10.1016/j.cell.2021.12.041"),
  CD3status INT64 OPTIONS(description="Presence (1) or absence (0) of the given marker as described in https://doi.org/10.1016/j.cell.2021.12.042"),
  SMAstatus INT64 OPTIONS(description="Presence (1) or absence (0) of the given marker as described in https://doi.org/10.1016/j.cell.2021.12.043"),
  COLIstatus INT64 OPTIONS(description="Presence (1) or absence (0) of the given marker as described in https://doi.org/10.1016/j.cell.2021.12.044"),
  CK5status INT64 OPTIONS(description="Presence (1) or absence (0) of the given marker as described in https://doi.org/10.1016/j.cell.2021.12.045"),
  CK7status INT64 OPTIONS(description="Presence (1) or absence (0) of the given marker as described in https://doi.org/10.1016/j.cell.2021.12.046"),
  P63status INT64 OPTIONS(description="Presence (1) or absence (0) of the given marker as described in https://doi.org/10.1016/j.cell.2021.12.047"),
  myoep_dist_label INT64 OPTIONS(description="Integer label for the group of cells in neighboring myoepithelial mask"),
  myoep_dist_MinDist FLOAT64 OPTIONS(description="Minimum distance from cell centroid to perimeter location of myoepithelial mask"),
  myoep_dist_MaxDist FLOAT64 OPTIONS(description="Maximum distance from cell centroid to perimeter location of myoepithelial mask"),
  myoep_dist_MedDist FLOAT64 OPTIONS(description="Median distance from cell centroid to perimeter location of myoepithelial mask"),
  myoep_dist_MeanDist FLOAT64 OPTIONS(description="Mean distance from cell centroid to perimeter location of myoepithelial mask"),
  celltype_code INT64 OPTIONS(description="\"celltype\" value coded as an integer"),
  myoep_dist_MinDist1 FLOAT64 OPTIONS(description="Minimum distance from cell centroid to perimeter location of myoepithelial mask"),
  Neighbor_dist_TUMOR FLOAT64 OPTIONS(description="Mean prevalence of given cell phenotype within a 36 micrometer radius of the index cell"),
  Neighbor_dist_MYOEP FLOAT64 OPTIONS(description="Mean prevalence of given cell phenotype within a 36 micrometer radius of the index cell"),
  Neighbor_dist_FIBROBLAST FLOAT64 OPTIONS(description="Mean prevalence of given cell phenotype within a 36 micrometer radius of the index cell"),
  Neighbor_dist_ENDO FLOAT64 OPTIONS(description="Mean prevalence of given cell phenotype within a 36 micrometer radius of the index cell"),
  Neighbor_dist_MONODC FLOAT64 OPTIONS(description="Mean prevalence of given cell phenotype within a 36 micrometer radius of the index cell"),
  Neighbor_dist_MONO FLOAT64 OPTIONS(description="Mean prevalence of given cell phenotype within a 36 micrometer radius of the index cell"),
  Neighbor_dist_MACS FLOAT64 OPTIONS(description="Mean prevalence of given cell phenotype within a 36 micrometer radius of the index cell"),
  Neighbor_dist_DC FLOAT64 OPTIONS(description="Mean prevalence of given cell phenotype within a 36 micrometer radius of the index cell"),
  Neighbor_dist_APC FLOAT64 OPTIONS(description="Mean prevalence of given cell phenotype within a 36 micrometer radius of the index cell"),
  Neighbor_dist_MAST FLOAT64 OPTIONS(description="Mean prevalence of given cell phenotype within a 36 micrometer radius of the index cell"),
  Neighbor_dist_CD8T FLOAT64 OPTIONS(description="Mean prevalence of given cell phenotype within a 36 micrometer radius of the index cell"),
  Neighbor_dist_CD4T FLOAT64 OPTIONS(description="Mean prevalence of given cell phenotype within a 36 micrometer radius of the index cell"),
  Neighbor_dist_BCELL FLOAT64 OPTIONS(description="Mean prevalence of given cell phenotype within a 36 micrometer radius of the index cell"),
  Neighbor_dist_TCELL FLOAT64 OPTIONS(description="Mean prevalence of given cell phenotype within a 36 micrometer radius of the index cell"),
  Neighbor_dist_NEUT FLOAT64 OPTIONS(description="Mean prevalence of given cell phenotype within a 36 micrometer radius of the index cell"),
  Neighbor_dist_IMMUNEOTHER FLOAT64 OPTIONS(description="Mean prevalence of given cell phenotype within a 36 micrometer radius of the index cell"),
  K10_cluster INT64 OPTIONS(description="Cluster number assigned to cell resulting from neighbor matrix clustered to 10 clusters using k-means clustering"),
  duct_edge_mask INT64 OPTIONS(description="Presence (1) or absence (0) of the specified mask marker as described in https://doi.org/10.1016/j.cell.2021.12.023"),
  duct_mid_mask INT64 OPTIONS(description="Presence (1) or absence (0) of the specified mask marker as described in https://doi.org/10.1016/j.cell.2021.12.023"),
  duct_core_mask INT64 OPTIONS(description="Presence (1) or absence (0) of the specified mask marker as described in https://doi.org/10.1016/j.cell.2021.12.023"),
  Source_filename STRING OPTIONS(description="Name of file record was derived from"),
  Source_entityId STRING OPTIONS(description="Synapse ID of source file"),
  HTAN_Center STRING OPTIONS(description="Name of HTAN Center"),
  HTAN_Biospecimen_ID STRING OPTIONS(description="HTAN ID associated with a biosample based on HTAN ID SOP (eg HTANx_yyy_zzz)")
)
OPTIONS(
  friendly_name="HTAN DUKE IMAGING LEVEL 4 DATA - MIBI R4 VERSIONED",
  description="Data was extracted in October 2023 from MIBI Imaging Level 4 csv file (Synapse ID syn52126197) submitted by the Duke HTAN Center. More details: see https://www.ncbi.nlm.nih.gov/pmc/articles/PMC8792442/",
  labels=[("access", "open"), ("data_type", "cell_spatial_characterization"), ("program", "htan"), ("source", "htan-duke"), ("category", "processed_-omics_data"), ("status", "current")]
);

INSERT INTO `isb-cgc-bq.HTAN_versioned.imaging_level4_Duke_mibi_r4` (Point_Num, HTAN_Parent_Data_File_ID, event, CohortNumber, cell_size, COLI, CD14, P63, Background, pS6, Ta, CD4, Au, HLADRDPDQ, ECADKRTCD45, Nuc, GZMB, ECADKRTCD45GLUT1CD44, Tryptase, ECAD, ECADKRTCD45GLUT1, AR, GLUT1, MPO, VIM, CD3, SMA, CD56, PanKRT, CD11c, HER2, CD68, P, CK7, CD8, Na, C, PD1, CD44, HIF1a, CD45, X140empty, FAP, PDL1, MMP9, Ki67, CK5, COX2, CD20, FOXP3, IDO1, CD36, ECADKRT, HH3, ER, Ca40, CD31, CK5norm, label, area, eccentricity, major_axis_length, minor_axis_length, perimeter, Tissue_Type, Status, Tissue, sublineage, phenotype, compartment, celllineage, sublineage_code, phenotype_code, compartment_code, celllineage_code, manual_gating_cellineage, manual_gating_subineage, manual_gating_phenotype, innerduct_mask, distal_mask, stroma_mask, periph_mask, epi_mask, duct_mask, myoep_mask, ERstatus, HER2status, ARstatus, Ki67status, pS6status, GLUT1status, HIF1astatus, COX2status, CD36status, CD44status, PD1status, PDL1status, IDO1status, GZMBstatus, ECADstatus, MMP9status, VIMstatus, FAPstatus, HLADRstatus, CD3status, SMAstatus, COLIstatus, CK5status, CK7status, P63status, myoep_dist_label, myoep_dist_MinDist, myoep_dist_MaxDist, myoep_dist_MedDist, myoep_dist_MeanDist, celltype_code, myoep_dist_MinDist1, Neighbor_dist_TUMOR, Neighbor_dist_MYOEP, Neighbor_dist_FIBROBLAST, Neighbor_dist_ENDO, Neighbor_dist_MONODC, Neighbor_dist_MONO, Neighbor_dist_MACS, Neighbor_dist_DC, Neighbor_dist_APC, Neighbor_dist_MAST, Neighbor_dist_CD8T, Neighbor_dist_CD4T, Neighbor_dist_BCELL, Neighbor_dist_TCELL, Neighbor_dist_NEUT, Neighbor_dist_IMMUNEOTHER, K10_cluster, duct_edge_mask, duct_mid_mask, duct_core_mask, Source_filename, Source_entityId, HTAN_Center, HTAN_Biospecimen_ID) VALUES (2203, 'HTA6_1135_316', 70004, 3, 0.8107491, 0.0, 0.0, 0.0, 0.5751123, 0.1611224, 0.5958758, 0.0, 0.583484, 0.0, 0.5227142, 0.7986695, 0.0, 0.5174683, 0.0, 0.2530735, 0.5196253, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.5151211, 0.0, 0.2631316, 0.0, 0.6781244, 0.0, 0.0, 0.6421613, 0.8908652, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.5230095, 0.7924695, 0.0, 0.5929129, 0.0, 0.0, 8, 610, 0.6590442, 32.60431, 24.52184, 92.42641, 'DCIS', 'ctrl', 'DCIS', 'TUMOR', 'TUMOR_ECADCK', 'epithelial', 'tumor', 1, 1, 1, 1, 'tumor', 'TUMOR', 'TUMOR_ECADCK', 1, 0, 0, 0, 1, 1, 0, 0, 1, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 8, 16.053, 1009.3, 675.28, 570.05, 15, 16.05, 0.94118, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 2, 1, 0, 0, 'Single_cell_data.csv', 'syn52126197', 'HTAN Duke', 'HTA6_1135_1'), (2203, 'HTA6_1135_316', 70005, 3, 0.602907, 0.0, 0.0, 0.0, 0.5532968, 0.0, 0.5471855, 0.0, 0.5886708, 0.0, 0.5345251, 0.7890184, 0.0, 0.5291606, 0.0, 0.17455, 0.5313664, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.5319615, 0.0, 0.0, 0.0, 0.7043126, 0.0, 0.0, 0.6170333, 0.8910052, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.534827, 0.7866988, 0.0, 0.5728545, 0.0, 0.0, 9, 149, 0.3729939, 14.33719, 13.30253, 42.14214, 'DCIS', 'ctrl', 'DCIS', 'TUMOR', 'TUMOR_ECADCK', 'epithelial', 'tumor', 1, 1, 1, 1, 'tumor', 'TUMOR', 'TUMOR_ECADCK', 0, 0, 0, 0, 1, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 9, 6.8104, 993.6, 657.21, 553.1, 15, 6.81, 0.90476, 0.047619, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 2, 1, 0, 0, 'Single_cell_data.csv', 'syn52126197', 'HTAN Duke', 'HTA6_1135_1'), (2203, 'HTA6_1135_316', 70010, 3, 0.5746445, 0.0, 0.0, 0.0, 0.5531303, 0.0, 0.3066454, 0.0, 0.4623145, 0.0, 0.4000237, 0.7775421, 0.0, 0.3960091, 0.0, 0.0, 0.3976598, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.4022121, 0.0, 0.0, 0.0, 0.6216398, 0.0, 0.0, 0.5988024, 0.898269, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.4002496, 0.7751519, 0.0, 0.5637375, 0.0, 0.0, 21, 123, 0.7246984, 16.30717, 11.23672, 47.31371, 'DCIS', 'ctrl', 'DCIS', 'TUMOR', 'TUMOR_ECADCK', 'epithelial', 'tumor', 1, 1, 1, 1, 'tumor', 'TUMOR', 'TUMOR_ECADCK', 1, 0, 0, 0, 1, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 21, 181.14, 1022.3, 691.87, 629.47, 15, 181.14, 0.81818, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 7, 0, 1, 0, 'Single_cell_data.csv', 'syn52126197', 'HTAN Duke', 'HTA6_1135_1'), (2203, 'HTA6_1135_316', 70019, 3, 0.8554558, 0.0, 0.0, 0.0, 0.6099748, 0.2650831, 0.4395802, 0.0, 0.5614794, 0.0, 0.6611275, 0.8144871, 0.0, 0.6602195, 0.0, 0.4466076, 0.6629716, 0.0, 0.297556, 0.0, 0.0, 0.0, 0.0, 0.0, 0.6530989, 0.0, 0.4393246, 0.0, 0.707803, 0.09980583, 0.0, 0.6141603, 0.9205206, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.6615009, 0.8064593, 0.0, 0.5767602, 0.0, 0.0, 32, 826, 0.8432071, 45.33021, 24.36902, 116.5685, 'DCIS', 'ctrl', 'DCIS', 'TUMOR', 'TUMOR_ECADCK', 'epithelial', 'tumor', 1, 1, 1, 1, 'tumor', 'TUMOR', 'TUMOR_ECADCK', 1, 0, 0, 0, 1, 1, 0, 0, 1, 0, 0, 1, 1, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 32, 59.388, 868.73, 526.08, 452.03, 15, 59.39, 1.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 2, 1, 0, 0, 'Single_cell_data.csv', 'syn52126197', 'HTAN Duke', 'HTA6_1135_1'), (2203, 'HTA6_1135_316', 70037, 3, 0.7477756, 0.0, 0.0, 0.0, 0.6352524, 0.6878128, 0.3902587, 0.0, 0.5521275, 0.0, 0.7492129, 0.8684959, 0.0, 0.7481542, 0.0, 0.6453292, 0.7512727, 0.0, 0.417097, 0.0, 0.0, 0.0, 0.0, 0.0, 0.7341928, 0.0, 0.6187248, 0.0, 0.8434478, 0.2326136, 0.0, 0.6387107, 0.961669, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.1889738, 0.0, 0.0, 0.0, 0.0, 0.7496361, 0.851709, 0.0, 0.6307576, 0.0, 0.0, 56, 398, 0.5889, 25.28236, 20.43335, 73.94113, 'DCIS', 'ctrl', 'DCIS', 'TUMOR', 'TUMOR_ECADCK', 'epithelial', 'tumor', 1, 1, 1, 1, 'tumor', 'TUMOR', 'TUMOR_LUMINAL', 1, 0, 0, 0, 1, 1, 0, 0, 1, 0, 0, 1, 1, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 56, 53.946, 649.88, 306.06, 325.1, 15, 53.95, 0.96296, 0.037037, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 0.0, 2, 1, 0, 0, 'Single_cell_data.csv', 'syn52126197', 'HTAN Duke', 'HTA6_1135_1');