-- DBMS: bigquery
CREATE TABLE `bigquery-public-data.gnomAD.v3_genomes__chr18`
(
  reference_name STRING OPTIONS(description="Reference name."),
  start_position INT64 OPTIONS(description="Start position (0-based). Corresponds to the first base of the string of reference bases."),
  end_position INT64 OPTIONS(description="End position (0-based). Corresponds to the first base after the last base in the reference allele."),
  reference_bases STRING OPTIONS(description="Reference bases."),
  alternate_bases ARRAY<STRUCT<alt STRING OPTIONS(description="Alternate base."), AC INT64 OPTIONS(description="Alternate allele count for samples"), AF FLOAT64 OPTIONS(description="Alternate allele frequency in samples"), n_alt_alleles INT64 OPTIONS(description="Total number of alternate alleles observed at variant locus"), AC_asj_female INT64 OPTIONS(description="Alternate allele count for female samples of Ashkenazi Jewish ancestry"), AF_asj_female FLOAT64 OPTIONS(description="Alternate allele frequency in female samples of Ashkenazi Jewish ancestry"), nhomalt_asj_female INT64 OPTIONS(description="Count of homozygous individuals in female samples of Ashkenazi Jewish ancestry"), AC_eas_female INT64 OPTIONS(description="Alternate allele count for female samples of East Asian ancestry"), AF_eas_female FLOAT64 OPTIONS(description="Alternate allele frequency in female samples of East Asian ancestry"), nhomalt_eas_female INT64 OPTIONS(description="Count of homozygous individuals in female samples of East Asian ancestry"), AC_afr_male INT64 OPTIONS(description="Alternate allele count for male samples of African-American/African ancestry"), AF_afr_male FLOAT64 OPTIONS(description="Alternate allele frequency in male samples of African-American/African ancestry"), nhomalt_afr_male INT64 OPTIONS(description="Count of homozygous individuals in male samples of African-American/African ancestry"), AC_female INT64 OPTIONS(description="Alternate allele count for female samples"), AF_female FLOAT64 OPTIONS(description="Alternate allele frequency in female samples"), nhomalt_female INT64 OPTIONS(description="Count of homozygous individuals in female samples"), AC_fin_male INT64 OPTIONS(description="Alternate allele count for male samples of Finnish ancestry"), AF_fin_male FLOAT64 OPTIONS(description="Alternate allele frequency in male samples of Finnish ancestry"), nhomalt_fin_male INT64 OPTIONS(description="Count of homozygous individuals in male samples of Finnish ancestry"), AC_oth_female INT64 OPTIONS(description="Alternate allele count for female samples of Other ancestry"), AF_oth_female FLOAT64 OPTIONS(description="Alternate allele frequency in female samples of Other ancestry"), nhomalt_oth_female INT64 OPTIONS(description="Count of homozygous individuals in female samples of Other ancestry"), AC_ami INT64 OPTIONS(description="Alternate allele count for samples of Amish ancestry"), AF_ami FLOAT64 OPTIONS(description="Alternate allele frequency in samples of Amish ancestry"), nhomalt_ami INT64 OPTIONS(description="Count of homozygous individuals in samples of Amish ancestry"), AC_oth INT64 OPTIONS(description="Alternate allele count for samples of Other ancestry"), AF_oth FLOAT64 OPTIONS(description="Alternate allele frequency in samples of Other ancestry"), nhomalt_oth INT64 OPTIONS(description="Count of homozygous individuals in samples of Other ancestry"), AC_male INT64 OPTIONS(description="Alternate allele count for male samples"), AF_male FLOAT64 OPTIONS(description="Alternate allele frequency in male samples"), nhomalt_male INT64 OPTIONS(description="Count of homozygous individuals in male samples"), AC_ami_female INT64 OPTIONS(description="Alternate allele count for female samples of Amish ancestry"), AF_ami_female FLOAT64 OPTIONS(description="Alternate allele frequency in female samples of Amish ancestry"), nhomalt_ami_female INT64 OPTIONS(description="Count of homozygous individuals in female samples of Amish ancestry"), AC_afr INT64 OPTIONS(description="Alternate allele count for samples of African-American/African ancestry"), AF_afr FLOAT64 OPTIONS(description="Alternate allele frequency in samples of African-American/African ancestry"), nhomalt_afr INT64 OPTIONS(description="Count of homozygous individuals in samples of African-American/African ancestry"), AC_eas_male INT64 OPTIONS(description="Alternate allele count for male samples of East Asian ancestry"), AF_eas_male FLOAT64 OPTIONS(description="Alternate allele frequency in male samples of East Asian ancestry"), nhomalt_eas_male INT64 OPTIONS(description="Count of homozygous individuals in male samples of East Asian ancestry"), AC_sas INT64 OPTIONS(description="Alternate allele count for samples of South Asian ancestry"), AF_sas FLOAT64 OPTIONS(description="Alternate allele frequency in samples of South Asian ancestry"), nhomalt_sas INT64 OPTIONS(description="Count of homozygous individuals in samples of South Asian ancestry"), AC_nfe_female INT64 OPTIONS(description="Alternate allele count for female samples of Non-Finnish European ancestry"), AF_nfe_female FLOAT64 OPTIONS(description="Alternate allele frequency in female samples of Non-Finnish European ancestry"), nhomalt_nfe_female INT64 OPTIONS(description="Count of homozygous individuals in female samples of Non-Finnish European ancestry"), AC_asj_male INT64 OPTIONS(description="Alternate allele count for male samples of Ashkenazi Jewish ancestry"), AF_asj_male FLOAT64 OPTIONS(description="Alternate allele frequency in male samples of Ashkenazi Jewish ancestry"), nhomalt_asj_male INT64 OPTIONS(description="Count of homozygous individuals in male samples of Ashkenazi Jewish ancestry"), AC_raw INT64 OPTIONS(description="Alternate allele count for samples, before removing low-confidence genotypes"), AF_raw FLOAT64 OPTIONS(description="Alternate allele frequency in samples, before removing low-confidence genotypes"), nhomalt_raw INT64 OPTIONS(description="Count of homozygous individuals in samples, before removing low-confidence genotypes"), AC_oth_male INT64 OPTIONS(description="Alternate allele count for male samples of Other ancestry"), AF_oth_male FLOAT64 OPTIONS(description="Alternate allele frequency in male samples of Other ancestry"), nhomalt_oth_male INT64 OPTIONS(description="Count of homozygous individuals in male samples of Other ancestry"), AC_nfe_male INT64 OPTIONS(description="Alternate allele count for male samples of Non-Finnish European ancestry"), AF_nfe_male FLOAT64 OPTIONS(description="Alternate allele frequency in male samples of Non-Finnish European ancestry"), nhomalt_nfe_male INT64 OPTIONS(description="Count of homozygous individuals in male samples of Non-Finnish European ancestry"), AC_asj INT64 OPTIONS(description="Alternate allele count for samples of Ashkenazi Jewish ancestry"), AF_asj FLOAT64 OPTIONS(description="Alternate allele frequency in samples of Ashkenazi Jewish ancestry"), nhomalt_asj INT64 OPTIONS(description="Count of homozygous individuals in samples of Ashkenazi Jewish ancestry"), AC_amr_male INT64 OPTIONS(description="Alternate allele count for male samples of Latino ancestry"), AF_amr_male FLOAT64 OPTIONS(description="Alternate allele frequency in male samples of Latino ancestry"), nhomalt_amr_male INT64 OPTIONS(description="Count of homozygous individuals in male samples of Latino ancestry"), nhomalt INT64 OPTIONS(description="Count of homozygous individuals in samples"), AC_amr_female INT64 OPTIONS(description="Alternate allele count for female samples of Latino ancestry"), AF_amr_female FLOAT64 OPTIONS(description="Alternate allele frequency in female samples of Latino ancestry"), nhomalt_amr_female INT64 OPTIONS(description="Count of homozygous individuals in female samples of Latino ancestry"), AC_sas_female INT64 OPTIONS(description="Alternate allele count for female samples of South Asian ancestry"), AF_sas_female FLOAT64 OPTIONS(description="Alternate allele frequency in female samples of South Asian ancestry"), nhomalt_sas_female INT64 OPTIONS(description="Count of homozygous individuals in female samples of South Asian ancestry"), AC_fin INT64 OPTIONS(description="Alternate allele count for samples of Finnish ancestry"), AF_fin FLOAT64 OPTIONS(description="Alternate allele frequency in samples of Finnish ancestry"), nhomalt_fin INT64 OPTIONS(description="Count of homozygous individuals in samples of Finnish ancestry"), AC_afr_female INT64 OPTIONS(description="Alternate allele count for female samples of African-American/African ancestry"), AF_afr_female FLOAT64 OPTIONS(description="Alternate allele frequency in female samples of African-American/African ancestry"), nhomalt_afr_female INT64 OPTIONS(description="Count of homozygous individuals in female samples of African-American/African ancestry"), AC_sas_male INT64 OPTIONS(description="Alternate allele count for male samples of South Asian ancestry"), AF_sas_male FLOAT64 OPTIONS(description="Alternate allele frequency in male samples of South Asian ancestry"), nhomalt_sas_male INT64 OPTIONS(description="Count of homozygous individuals in male samples of South Asian ancestry"), AC_amr INT64 OPTIONS(description="Alternate allele count for samples of Latino ancestry"), AF_amr FLOAT64 OPTIONS(description="Alternate allele frequency in samples of Latino ancestry"), nhomalt_amr INT64 OPTIONS(description="Count of homozygous individuals in samples of Latino ancestry"), AC_nfe INT64 OPTIONS(description="Alternate allele count for samples of Non-Finnish European ancestry"), AF_nfe FLOAT64 OPTIONS(description="Alternate allele frequency in samples of Non-Finnish European ancestry"), nhomalt_nfe INT64 OPTIONS(description="Count of homozygous individuals in samples of Non-Finnish European ancestry"), AC_eas INT64 OPTIONS(description="Alternate allele count for samples of East Asian ancestry"), AF_eas FLOAT64 OPTIONS(description="Alternate allele frequency in samples of East Asian ancestry"), nhomalt_eas INT64 OPTIONS(description="Count of homozygous individuals in samples of East Asian ancestry"), AC_ami_male INT64 OPTIONS(description="Alternate allele count for male samples of Amish ancestry"), AF_ami_male FLOAT64 OPTIONS(description="Alternate allele frequency in male samples of Amish ancestry"), nhomalt_ami_male INT64 OPTIONS(description="Count of homozygous individuals in male samples of Amish ancestry"), AC_fin_female INT64 OPTIONS(description="Alternate allele count for female samples of Finnish ancestry"), AF_fin_female FLOAT64 OPTIONS(description="Alternate allele frequency in female samples of Finnish ancestry"), nhomalt_fin_female INT64 OPTIONS(description="Count of homozygous individuals in female samples of Finnish ancestry"), faf95_afr FLOAT64 OPTIONS(description="Filtering allele frequency (using Poisson 95% CI) for samples of African-American/African ancestry"), faf99_afr FLOAT64 OPTIONS(description="Filtering allele frequency (using Poisson 99% CI) for samples of African-American/African ancestry"), faf95_sas FLOAT64 OPTIONS(description="Filtering allele frequency (using Poisson 95% CI) for samples of South Asian ancestry"), faf99_sas FLOAT64 OPTIONS(description="Filtering allele frequency (using Poisson 99% CI) for samples of South Asian ancestry"), faf95_amr FLOAT64 OPTIONS(description="Filtering allele frequency (using Poisson 95% CI) for samples of Latino ancestry"), faf99_amr FLOAT64 OPTIONS(description="Filtering allele frequency (using Poisson 99% CI) for samples of Latino ancestry"), faf95_nfe FLOAT64 OPTIONS(description="Filtering allele frequency (using Poisson 95% CI) for samples of Non-Finnish European ancestry"), faf99_nfe FLOAT64 OPTIONS(description="Filtering allele frequency (using Poisson 99% CI) for samples of Non-Finnish European ancestry"), faf95_eas FLOAT64 OPTIONS(description="Filtering allele frequency (using Poisson 95% CI) for samples of East Asian ancestry"), faf99_eas FLOAT64 OPTIONS(description="Filtering allele frequency (using Poisson 99% CI) for samples of East Asian ancestry"), vep ARRAY<STRUCT<allele STRING OPTIONS(description="The ALT part of the annotation field."), Consequence STRING OPTIONS(description="Consequence type of this variant"), IMPACT STRING OPTIONS(description="The impact modifier for the consequence type"), SYMBOL STRING OPTIONS(description="The gene symbol"), Gene STRING OPTIONS(description="Ensembl stable ID of affected gene"), Feature_type STRING OPTIONS(description="Type of feature. Currently one of Transcript, RegulatoryFeature, MotifFeature."), Feature STRING OPTIONS(description="Ensembl stable ID of feature"), BIOTYPE STRING OPTIONS(description="Biotype of transcript or regulatory feature"), EXON STRING OPTIONS(description="The exon number (out of total number)"), INTRON STRING OPTIONS(description="The intron number (out of total number)"), empty STRING OPTIONS(description="")>> OPTIONS(description="List of vep annotations for this alternate.")>> OPTIONS(description="One record for each alternate base (if any)."),
  names ARRAY<STRING> OPTIONS(description="Variant names (e.g. RefSNP ID)."),
  quality FLOAT64 OPTIONS(description="Phred-scaled quality score (-10log10 prob(call is wrong)). Higher values imply better quality."),
  filter ARRAY<STRING> OPTIONS(description="List of failed filters (if any) or \"PASS\" indicating the variant has passed all filters."),
  call ARRAY<STRUCT<name STRING OPTIONS(description="Name of the call."), genotype ARRAY<INT64> OPTIONS(description="Genotype of the call. \"-1\" is used in cases where the genotype is not called."), phaseset STRING OPTIONS(description="Phaseset of the call (if any). \"*\" is used in cases where the genotype is phased, but no phase set (\"PS\" in FORMAT) was specified.")>> OPTIONS(description="One record for each call."),
  AN INT64 OPTIONS(description="Total number of alleles in samples"),
  non_par BOOL OPTIONS(description=""),
  lcr BOOL OPTIONS(description="Variant falls within a low complexity region"),
  variant_type STRING OPTIONS(description="Variant type (snv, indel, multi-snv, multi-indel, or mixed)"),
  ReadPosRankSum FLOAT64 OPTIONS(description="Z-score from Wilcoxon rank sum test of alternate vs. reference read position bias"),
  MQRankSum FLOAT64 OPTIONS(description="Z-score from Wilcoxon rank sum test of alternate vs. reference read mapping qualities"),
  RAW_MQ FLOAT64 OPTIONS(description=""),
  DP INT64 OPTIONS(description="Depth of informative coverage for each sample; reads with MQ=255 or with bad mates are filtered"),
  MQ_DP INT64 OPTIONS(description=""),
  VarDP INT64 OPTIONS(description=""),
  MQ FLOAT64 OPTIONS(description="Root mean square of the mapping quality of reads across all samples"),
  QD FLOAT64 OPTIONS(description="Variant call confidence normalized by depth of sample reads supporting a variant"),
  FS FLOAT64 OPTIONS(description="Phred-scaled p-value of Fisher's exact test for strand bias"),
  SB ARRAY<INT64> OPTIONS(description=""),
  InbreedingCoeff FLOAT64 OPTIONS(description="Inbreeding coefficient as estimated from the genotype likelihoods per-sample when compared against the Hardy-Weinberg expectation"),
  AS_VQSLOD FLOAT64 OPTIONS(description="Log-odds ratio of being a true variant versus being a false positive under the trained allele-specific VQSR Gaussian mixture model"),
  NEGATIVE_TRAIN_SITE BOOL OPTIONS(description="Variant was used to build the negative training set of low-quality variants for VQSR"),
  POSITIVE_TRAIN_SITE BOOL OPTIONS(description="Variant was used to build the positive training set of high-quality variants for VQSR"),
  culprit STRING OPTIONS(description="Worst-performing annotation in the VQSR Gaussian mixture model"),
  SOR FLOAT64 OPTIONS(description="Strand bias estimated by the symmetric odds ratio test"),
  AN_asj_female INT64 OPTIONS(description="Total number of alleles in female samples of Ashkenazi Jewish ancestry"),
  AN_eas_female INT64 OPTIONS(description="Total number of alleles in female samples of East Asian ancestry"),
  AN_afr_male INT64 OPTIONS(description="Total number of alleles in male samples of African-American/African ancestry"),
  AN_female INT64 OPTIONS(description="Total number of alleles in female samples"),
  AN_fin_male INT64 OPTIONS(description="Total number of alleles in male samples of Finnish ancestry"),
  AN_oth_female INT64 OPTIONS(description="Total number of alleles in female samples of Other ancestry"),
  AN_ami INT64 OPTIONS(description="Total number of alleles in samples of Amish ancestry"),
  AN_oth INT64 OPTIONS(description="Total number of alleles in samples of Other ancestry"),
  AN_male INT64 OPTIONS(description="Total number of alleles in male samples"),
  AN_ami_female INT64 OPTIONS(description="Total number of alleles in female samples of Amish ancestry"),
  AN_afr INT64 OPTIONS(description="Total number of alleles in samples of African-American/African ancestry"),
  AN_eas_male INT64 OPTIONS(description="Total number of alleles in male samples of East Asian ancestry"),
  AN_sas INT64 OPTIONS(description="Total number of alleles in samples of South Asian ancestry"),
  AN_nfe_female INT64 OPTIONS(description="Total number of alleles in female samples of Non-Finnish European ancestry"),
  AN_asj_male INT64 OPTIONS(description="Total number of alleles in male samples of Ashkenazi Jewish ancestry"),
  AN_raw INT64 OPTIONS(description="Total number of alleles in samples, before removing low-confidence genotypes"),
  AN_oth_male INT64 OPTIONS(description="Total number of alleles in male samples of Other ancestry"),
  AN_nfe_male INT64 OPTIONS(description="Total number of alleles in male samples of Non-Finnish European ancestry"),
  AN_asj INT64 OPTIONS(description="Total number of alleles in samples of Ashkenazi Jewish ancestry"),
  AN_amr_male INT64 OPTIONS(description="Total number of alleles in male samples of Latino ancestry"),
  AN_amr_female INT64 OPTIONS(description="Total number of alleles in female samples of Latino ancestry"),
  AN_sas_female INT64 OPTIONS(description="Total number of alleles in female samples of South Asian ancestry"),
  AN_fin INT64 OPTIONS(description="Total number of alleles in samples of Finnish ancestry"),
  AN_afr_female INT64 OPTIONS(description="Total number of alleles in female samples of African-American/African ancestry"),
  AN_sas_male INT64 OPTIONS(description="Total number of alleles in male samples of South Asian ancestry"),
  AN_amr INT64 OPTIONS(description="Total number of alleles in samples of Latino ancestry"),
  AN_nfe INT64 OPTIONS(description="Total number of alleles in samples of Non-Finnish European ancestry"),
  AN_eas INT64 OPTIONS(description="Total number of alleles in samples of East Asian ancestry"),
  AN_ami_male INT64 OPTIONS(description="Total number of alleles in male samples of Amish ancestry"),
  AN_fin_female INT64 OPTIONS(description="Total number of alleles in female samples of Finnish ancestry"),
  faf95_adj FLOAT64 OPTIONS(description=""),
  faf99_adj FLOAT64 OPTIONS(description="")
)
PARTITION BY RANGE_BUCKET(start_position, GENERATE_ARRAY(0, 80299920, 20080))
CLUSTER BY start_position, end_position;

INSERT INTO `bigquery-public-data.gnomAD.v3_genomes__chr18` (reference_name, start_position, end_position, reference_bases, alternate_bases, names, quality, filter, call, AN, non_par, lcr, variant_type, ReadPosRankSum, MQRankSum, RAW_MQ, DP, MQ_DP, VarDP, MQ, QD, FS, SB, InbreedingCoeff, AS_VQSLOD, NEGATIVE_TRAIN_SITE, POSITIVE_TRAIN_SITE, culprit, SOR, AN_asj_female, AN_eas_female, AN_afr_male, AN_female, AN_fin_male, AN_oth_female, AN_ami, AN_oth, AN_male, AN_ami_female, AN_afr, AN_eas_male, AN_sas, AN_nfe_female, AN_asj_male, AN_raw, AN_oth_male, AN_nfe_male, AN_asj, AN_amr_male, AN_amr_female, AN_sas_female, AN_fin, AN_afr_female, AN_sas_male, AN_amr, AN_nfe, AN_eas, AN_ami_male, AN_fin_female, faf95_adj, faf99_adj) VALUES ('chr18', 53252510, 53252511, 'G', '[{''alt'': ''A'', ''AC'': 20, ''AF'': 0.000139978, ''n_alt_alleles'': 1, ''AC_asj_female'': 0, ''AF_asj_female'': 0.0, ''nhomalt_asj_female'': 0, ''AC_eas_female'': 0, ''AF_eas_female'': 0.0, ''nhomalt_eas_female'': 0, ''AC_afr_male'': 9, ''AF_afr_male'': 0.00046637, ''nhomalt_afr_male'': 0, ''AC_female'': 11, ''AF_female'': 0.000149343, ''nhomalt_female'': 0, ''AC_fin_male'': 0, ''AF_fin_male'': 0.0, ''nhomalt_fin_male'': 0, ''AC_oth_female'': 1, ''AF_oth_female'': 0.000912409, ''nhomalt_oth_female'': 0, ''AC_ami'': 0, ''AF_ami'': 0.0, ''nhomalt_ami'': 0, ''AC_oth'': 1, ''AF_oth'': 0.000466853, ''nhomalt_oth'': 0, ''AC_male'': 9, ''AF_male'': 0.000130013, ''nhomalt_male'': 0, ''AC_ami_female'': 0, ''AF_ami_female'': 0.0, ''nhomalt_ami_female'': 0, ''AC_afr'': 19, ''AF_afr'': 0.000453007, ''nhomalt_afr'': 0, ''AC_eas_male'': 0, ''AF_eas_male'': 0.0, ''nhomalt_eas_male'': 0, ''AC_sas'': 0, ''AF_sas'': 0.0, ''nhomalt_sas'': 0, ''AC_nfe_female'': 0, ''AF_nfe_female'': 0.0, ''nhomalt_nfe_female'': 0, ''AC_asj_male'': 0, ''AF_asj_male'': 0.0, ''nhomalt_asj_male'': 0, ''AC_raw'': 20, ''AF_raw'': 0.000139585, ''nhomalt_raw'': 0, ''AC_oth_male'': 0, ''AF_oth_male'': 0.0, ''nhomalt_oth_male'': 0, ''AC_nfe_male'': 0, ''AF_nfe_male'': 0.0, ''nhomalt_nfe_male'': 0, ''AC_asj'': 0, ''AF_asj'': 0.0, ''nhomalt_asj'': 0, ''AC_amr_male'': 0, ''AF_amr_male'': 0.0, ''nhomalt_amr_male'': 0, ''nhomalt'': 0, ''AC_amr_female'': 0, ''AF_amr_female'': 0.0, ''nhomalt_amr_female'': 0, ''AC_sas_female'': 0, ''AF_sas_female'': 0.0, ''nhomalt_sas_female'': 0, ''AC_fin'': 0, ''AF_fin'': 0.0, ''nhomalt_fin'': 0, ''AC_afr_female'': 10, ''AF_afr_female'': 0.000441618, ''nhomalt_afr_female'': 0, ''AC_sas_male'': 0, ''AF_sas_male'': 0.0, ''nhomalt_sas_male'': 0, ''AC_amr'': 0, ''AF_amr'': 0.0, ''nhomalt_amr'': 0, ''AC_nfe'': 0, ''AF_nfe'': 0.0, ''nhomalt_nfe'': 0, ''AC_eas'': 0, ''AF_eas'': 0.0, ''nhomalt_eas'': 0, ''AC_ami_male'': 0, ''AF_ami_male'': 0.0, ''nhomalt_ami_male'': 0, ''AC_fin_female'': 0, ''AF_fin_female'': 0.0, ''nhomalt_fin_female'': 0, ''faf95_afr'': 0.00029638, ''faf99_afr'': 0.00029648, ''faf95_sas'': 0.0, ''faf99_sas'': 0.0, ''faf95_amr'': 0.0, ''faf99_amr'': 0.0, ''faf95_nfe'': 0.0, ''faf99_nfe'': 0.0, ''faf95_eas'': 0.0, ''faf99_eas'': 0.0, ''vep'': array([{''allele'': ''A'', ''Consequence'': ''intron_variant&NMD_transcript_variant'', ''IMPACT'': ''MODIFIER'', ''SYMBOL'': ''DCC'', ''Gene'': ''ENSG00000187323'', ''Feature_type'': ''Transcript'', ''Feature'': ''ENST00000304775'', ''BIOTYPE'': ''nonsense_mediated_decay'', ''EXON'': None, ''INTRON'': ''11/18'', ''empty'': None},
        {''allele'': ''A'', ''Consequence'': ''intron_variant'', ''IMPACT'': ''MODIFIER'', ''SYMBOL'': ''DCC'', ''Gene'': ''ENSG00000187323'', ''Feature_type'': ''Transcript'', ''Feature'': ''ENST00000412726'', ''BIOTYPE'': ''protein_coding'', ''EXON'': None, ''INTRON'': ''11/27'', ''empty'': None},
        {''allele'': ''A'', ''Consequence'': ''intron_variant'', ''IMPACT'': ''MODIFIER'', ''SYMBOL'': ''DCC'', ''Gene'': ''ENSG00000187323'', ''Feature_type'': ''Transcript'', ''Feature'': ''ENST00000442544'', ''BIOTYPE'': ''protein_coding'', ''EXON'': None, ''INTRON'': ''12/28'', ''empty'': None},
        {''allele'': ''A'', ''Consequence'': ''intron_variant'', ''IMPACT'': ''MODIFIER'', ''SYMBOL'': ''DCC'', ''Gene'': ''ENSG00000187323'', ''Feature_type'': ''Transcript'', ''Feature'': ''ENST00000581580'', ''BIOTYPE'': ''protein_coding'', ''EXON'': None, ''INTRON'': ''9/26'', ''empty'': None}],
       dtype=object)}                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]', '[''rs542743796'']', 56623.0, '[''PASS'']', '[]', 142880, NULL, NULL, 'snv', 0.277, 0.124, 15073200.0, 4156, 4187, 4156, 60.0, 13.6244, 0.0, '[1074 1015 1067 1000]', -0.000139604, 20.3471, NULL, NULL, 'AS_FS', 0.702, 1756, 1442, 19298, 73656, 7928, 1096, 900, 2142, 69224, 470, 41942, 1672, 3030, 37304, 1560, 143282, 1046, 27124, 3316, 7694, 5886, 558, 10428, 22644, 2472, 13580, 64428, 3114, 430, 2500, 9.223e-05, 9.209e-05), ('chr18', 53267810, 53267811, 'G', '[{''alt'': ''C'', ''AC'': 281, ''AF'': 0.00196259, ''n_alt_alleles'': 1, ''AC_asj_female'': 0, ''AF_asj_female'': 0.0, ''nhomalt_asj_female'': 0, ''AC_eas_female'': 0, ''AF_eas_female'': 0.0, ''nhomalt_eas_female'': 0, ''AC_afr_male'': 128, ''AF_afr_male'': 0.00662526, ''nhomalt_afr_male'': 0, ''AC_female'': 147, ''AF_female'': 0.00199203, ''nhomalt_female'': 0, ''AC_fin_male'': 0, ''AF_fin_male'': 0.0, ''nhomalt_fin_male'': 0, ''AC_oth_female'': 0, ''AF_oth_female'': 0.0, ''nhomalt_oth_female'': 0, ''AC_ami'': 0, ''AF_ami'': 0.0, ''nhomalt_ami'': 0, ''AC_oth'': 1, ''AF_oth'': 0.000465116, ''nhomalt_oth'': 0, ''AC_male'': 134, ''AF_male'': 0.00193128, ''nhomalt_male'': 0, ''AC_ami_female'': 0, ''AF_ami_female'': 0.0, ''nhomalt_ami_female'': 0, ''AC_afr'': 271, ''AF_afr'': 0.00645484, ''nhomalt_afr'': 0, ''AC_eas_male'': 0, ''AF_eas_male'': 0.0, ''nhomalt_eas_male'': 0, ''AC_sas'': 0, ''AF_sas'': 0.0, ''nhomalt_sas'': 0, ''AC_nfe_female'': 0, ''AF_nfe_female'': 0.0, ''nhomalt_nfe_female'': 0, ''AC_asj_male'': 0, ''AF_asj_male'': 0.0, ''nhomalt_asj_male'': 0, ''AC_raw'': 283, ''AF_raw'': 0.00197424, ''nhomalt_raw'': 0, ''AC_oth_male'': 1, 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''faf99_sas'': 0.0, ''faf95_amr'': 0.00034373, ''faf99_amr'': 0.00034409, ''faf95_nfe'': 0.0, ''faf99_nfe'': 0.0, ''faf95_eas'': 0.0, ''faf99_eas'': 0.0, ''vep'': array([{''allele'': ''C'', ''Consequence'': ''intron_variant&NMD_transcript_variant'', ''IMPACT'': ''MODIFIER'', ''SYMBOL'': ''DCC'', ''Gene'': ''ENSG00000187323'', ''Feature_type'': ''Transcript'', ''Feature'': ''ENST00000304775'', ''BIOTYPE'': ''nonsense_mediated_decay'', ''EXON'': None, ''INTRON'': ''11/18'', ''empty'': None},
        {''allele'': ''C'', ''Consequence'': ''intron_variant'', ''IMPACT'': ''MODIFIER'', ''SYMBOL'': ''DCC'', ''Gene'': ''ENSG00000187323'', ''Feature_type'': ''Transcript'', ''Feature'': ''ENST00000412726'', ''BIOTYPE'': ''protein_coding'', ''EXON'': None, ''INTRON'': ''11/27'', ''empty'': None},
        {''allele'': ''C'', ''Consequence'': ''intron_variant'', ''IMPACT'': ''MODIFIER'', ''SYMBOL'': ''DCC'', ''Gene'': ''ENSG00000187323'', ''Feature_type'': ''Transcript'', ''Feature'': ''ENST00000442544'', ''BIOTYPE'': ''protein_coding'', ''EXON'': None, ''INTRON'': ''12/28'', ''empty'': None},
        {''allele'': ''C'', ''Consequence'': ''intron_variant'', ''IMPACT'': ''MODIFIER'', ''SYMBOL'': ''DCC'', ''Gene'': ''ENSG00000187323'', ''Feature_type'': ''Transcript'', ''Feature'': ''ENST00000581580'', ''BIOTYPE'': ''protein_coding'', ''EXON'': None, ''INTRON'': ''9/26'', ''empty'': None}],
       dtype=object)}                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    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''nhomalt_asj_female'': 0, ''AC_eas_female'': 0, ''AF_eas_female'': 0.0, ''nhomalt_eas_female'': 0, ''AC_afr_male'': 9, ''AF_afr_male'': 0.000465694, ''nhomalt_afr_male'': 0, ''AC_female'': 20, ''AF_female'': 0.000270841, ''nhomalt_female'': 0, ''AC_fin_male'': 0, ''AF_fin_male'': 0.0, ''nhomalt_fin_male'': 0, ''AC_oth_female'': 0, ''AF_oth_female'': 0.0, ''nhomalt_oth_female'': 0, ''AC_ami'': 0, ''AF_ami'': 0.0, ''nhomalt_ami'': 0, ''AC_oth'': 0, ''AF_oth'': 0.0, ''nhomalt_oth'': 0, ''AC_male'': 9, ''AF_male'': 0.000129668, ''nhomalt_male'': 0, ''AC_ami_female'': 0, ''AF_ami_female'': 0.0, ''nhomalt_ami_female'': 0, ''AC_afr'': 29, ''AF_afr'': 0.000690016, ''nhomalt_afr'': 0, ''AC_eas_male'': 0, ''AF_eas_male'': 0.0, ''nhomalt_eas_male'': 0, ''AC_sas'': 0, ''AF_sas'': 0.0, ''nhomalt_sas'': 0, ''AC_nfe_female'': 0, ''AF_nfe_female'': 0.0, ''nhomalt_nfe_female'': 0, ''AC_asj_male'': 0, ''AF_asj_male'': 0.0, ''nhomalt_asj_male'': 0, ''AC_raw'': 31, ''AF_raw'': 0.000216209, ''nhomalt_raw'': 0, ''AC_oth_male'': 0, ''AF_oth_male'': 0.0, ''nhomalt_oth_male'': 0, ''AC_nfe_male'': 0, ''AF_nfe_male'': 0.0, ''nhomalt_nfe_male'': 0, ''AC_asj'': 0, ''AF_asj'': 0.0, ''nhomalt_asj'': 0, ''AC_amr_male'': 0, ''AF_amr_male'': 0.0, ''nhomalt_amr_male'': 0, ''nhomalt'': 0, ''AC_amr_female'': 0, ''AF_amr_female'': 0.0, ''nhomalt_amr_female'': 0, ''AC_sas_female'': 0, ''AF_sas_female'': 0.0, ''nhomalt_sas_female'': 0, ''AC_fin'': 0, ''AF_fin'': 0.0, ''nhomalt_fin'': 0, ''AC_afr_female'': 20, ''AF_afr_female'': 0.00088098, ''nhomalt_afr_female'': 0, ''AC_sas_male'': 0, ''AF_sas_male'': 0.0, ''nhomalt_sas_male'': 0, ''AC_amr'': 0, ''AF_amr'': 0.0, ''nhomalt_amr'': 0, ''AC_nfe'': 0, ''AF_nfe'': 0.0, ''nhomalt_nfe'': 0, ''AC_eas'': 0, ''AF_eas'': 0.0, ''nhomalt_eas'': 0, ''AC_ami_male'': 0, ''AF_ami_male'': 0.0, ''nhomalt_ami_male'': 0, ''AC_fin_female'': 0, ''AF_fin_female'': 0.0, ''nhomalt_fin_female'': 0, ''faf95_afr'': 0.00049288, ''faf99_afr'': 0.0004928, ''faf95_sas'': 0.0, ''faf99_sas'': 0.0, ''faf95_amr'': 0.0, ''faf99_amr'': 0.0, ''faf95_nfe'': 0.0, ''faf99_nfe'': 0.0, ''faf95_eas'': 0.0, ''faf99_eas'': 0.0, ''vep'': array([{''allele'': ''A'', ''Consequence'': ''intron_variant&NMD_transcript_variant'', ''IMPACT'': ''MODIFIER'', ''SYMBOL'': ''DCC'', ''Gene'': ''ENSG00000187323'', ''Feature_type'': ''Transcript'', ''Feature'': ''ENST00000304775'', ''BIOTYPE'': ''nonsense_mediated_decay'', ''EXON'': None, ''INTRON'': ''11/18'', ''empty'': None},
        {''allele'': ''A'', ''Consequence'': ''intron_variant'', ''IMPACT'': ''MODIFIER'', ''SYMBOL'': ''DCC'', ''Gene'': ''ENSG00000187323'', ''Feature_type'': ''Transcript'', ''Feature'': ''ENST00000412726'', ''BIOTYPE'': ''protein_coding'', ''EXON'': None, ''INTRON'': ''11/27'', ''empty'': None},
        {''allele'': ''A'', ''Consequence'': ''intron_variant'', ''IMPACT'': ''MODIFIER'', ''SYMBOL'': ''DCC'', ''Gene'': ''ENSG00000187323'', ''Feature_type'': ''Transcript'', ''Feature'': ''ENST00000442544'', ''BIOTYPE'': ''protein_coding'', ''EXON'': None, ''INTRON'': ''12/28'', ''empty'': None},
        {''allele'': ''A'', ''Consequence'': ''intron_variant'', ''IMPACT'': ''MODIFIER'', ''SYMBOL'': ''DCC'', ''Gene'': ''ENSG00000187323'', ''Feature_type'': ''Transcript'', ''Feature'': ''ENST00000581580'', ''BIOTYPE'': ''protein_coding'', ''EXON'': None, ''INTRON'': ''9/26'', ''empty'': None}],
       dtype=object)}                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]', '[''rs1033358633'']', 18219.0, '[''PASS'']', '[]', 143252, NULL, NULL, 'snv', -0.022, -0.127, 3996360.0, 1339, 1349, 1339, 54.4285, 13.6064, 1.92865e-15, '[317 360 312 350]', -0.000216255, 0.4975, True, NULL, 'AS_MQ', 0.681, 1762, 1448, 19326, 73844, 7960, 1098, 900, 2150, 69408, 470, 42028, 1684, 3038, 37382, 1562, 143380, 1052, 27176, 3324, 7744, 5914, 564, 10464, 22702, 2474, 13658, 64558, 3132, 430, 2504, 0.00014474, 0.00014444), ('chr18', 53254765, 53254766, 'C', '[{''alt'': ''G'', ''AC'': 11, ''AF'': 7.68715e-05, ''n_alt_alleles'': 1, ''AC_asj_female'': 0, ''AF_asj_female'': 0.0, ''nhomalt_asj_female'': 0, ''AC_eas_female'': 0, ''AF_eas_female'': 0.0, ''nhomalt_eas_female'': 0, ''AC_afr_male'': 3, ''AF_afr_male'': 0.000155328, ''nhomalt_afr_male'': 0, ''AC_female'': 8, ''AF_female'': 0.000108457, ''nhomalt_female'': 0, ''AC_fin_male'': 0, ''AF_fin_male'': 0.0, ''nhomalt_fin_male'': 0, ''AC_oth_female'': 0, ''AF_oth_female'': 0.0, ''nhomalt_oth_female'': 0, ''AC_ami'': 0, ''AF_ami'': 0.0, ''nhomalt_ami'': 0, ''AC_oth'': 0, ''AF_oth'': 0.0, ''nhomalt_oth'': 0, ''AC_male'': 3, ''AF_male'': 4.32688e-05, ''nhomalt_male'': 0, ''AC_ami_female'': 0, ''AF_ami_female'': 0.0, ''nhomalt_ami_female'': 0, ''AC_afr'': 10, ''AF_afr'': 0.000238231, ''nhomalt_afr'': 0, ''AC_eas_male'': 0, ''AF_eas_male'': 0.0, ''nhomalt_eas_male'': 0, ''AC_sas'': 0, ''AF_sas'': 0.0, ''nhomalt_sas'': 0, ''AC_nfe_female'': 0, ''AF_nfe_female'': 0.0, ''nhomalt_nfe_female'': 0, ''AC_asj_male'': 0, ''AF_asj_male'': 0.0, ''nhomalt_asj_male'': 0, ''AC_raw'': 11, ''AF_raw'': 7.67449e-05, ''nhomalt_raw'': 0, ''AC_oth_male'': 0, ''AF_oth_male'': 0.0, ''nhomalt_oth_male'': 0, ''AC_nfe_male'': 0, ''AF_nfe_male'': 0.0, ''nhomalt_nfe_male'': 0, ''AC_asj'': 0, ''AF_asj'': 0.0, ''nhomalt_asj'': 0, ''AC_amr_male'': 0, ''AF_amr_male'': 0.0, ''nhomalt_amr_male'': 0, ''nhomalt'': 0, ''AC_amr_female'': 1, ''AF_amr_female'': 0.000169492, ''nhomalt_amr_female'': 0, ''AC_sas_female'': 0, ''AF_sas_female'': 0.0, ''nhomalt_sas_female'': 0, ''AC_fin'': 0, ''AF_fin'': 0.0, ''nhomalt_fin'': 0, ''AC_afr_female'': 7, ''AF_afr_female'': 0.000308887, ''nhomalt_afr_female'': 0, ''AC_sas_male'': 0, ''AF_sas_male'': 0.0, ''nhomalt_sas_male'': 0, ''AC_amr'': 1, ''AF_amr'': 7.34646e-05, ''nhomalt_amr'': 0, ''AC_nfe'': 0, ''AF_nfe'': 0.0, ''nhomalt_nfe'': 0, ''AC_eas'': 0, ''AF_eas'': 0.0, ''nhomalt_eas'': 0, ''AC_ami_male'': 0, ''AF_ami_male'': 0.0, ''nhomalt_ami_male'': 0, ''AC_fin_female'': 0, ''AF_fin_female'': 0.0, ''nhomalt_fin_female'': 0, ''faf95_afr'': 0.00012892, ''faf99_afr'': 0.00012827, ''faf95_sas'': 0.0, ''faf99_sas'': 0.0, ''faf95_amr'': 0.0, ''faf99_amr'': 0.0, ''faf95_nfe'': 0.0, ''faf99_nfe'': 0.0, ''faf95_eas'': 0.0, ''faf99_eas'': 0.0, ''vep'': array([{''allele'': ''G'', ''Consequence'': ''intron_variant&NMD_transcript_variant'', ''IMPACT'': ''MODIFIER'', ''SYMBOL'': ''DCC'', ''Gene'': ''ENSG00000187323'', ''Feature_type'': ''Transcript'', ''Feature'': ''ENST00000304775'', ''BIOTYPE'': ''nonsense_mediated_decay'', ''EXON'': None, ''INTRON'': ''11/18'', ''empty'': None},
        {''allele'': ''G'', ''Consequence'': ''intron_variant'', ''IMPACT'': ''MODIFIER'', ''SYMBOL'': ''DCC'', ''Gene'': ''ENSG00000187323'', ''Feature_type'': ''Transcript'', ''Feature'': ''ENST00000412726'', ''BIOTYPE'': ''protein_coding'', ''EXON'': None, ''INTRON'': ''11/27'', ''empty'': None},
        {''allele'': ''G'', ''Consequence'': ''intron_variant'', ''IMPACT'': ''MODIFIER'', ''SYMBOL'': ''DCC'', ''Gene'': ''ENSG00000187323'', ''Feature_type'': ''Transcript'', ''Feature'': ''ENST00000442544'', ''BIOTYPE'': ''protein_coding'', ''EXON'': None, ''INTRON'': ''12/28'', ''empty'': None},
        {''allele'': ''G'', ''Consequence'': ''intron_variant'', ''IMPACT'': ''MODIFIER'', ''SYMBOL'': ''DCC'', ''Gene'': ''ENSG00000187323'', ''Feature_type'': ''Transcript'', ''Feature'': ''ENST00000581580'', ''BIOTYPE'': ''protein_coding'', ''EXON'': None, ''INTRON'': ''9/26'', ''empty'': None},
        {''allele'': ''G'', ''Consequence'': ''regulatory_region_variant'', ''IMPACT'': ''MODIFIER'', ''SYMBOL'': None, ''Gene'': None, ''Feature_type'': ''RegulatoryFeature'', ''Feature'': ''ENSR00000576392'', ''BIOTYPE'': ''promoter_flanking_region'', ''EXON'': None, ''INTRON'': None, ''empty'': None}],
       dtype=object)}                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]', '[''rs945374892'']', 12881.0, '[''PASS'']', '[]', 143096, NULL, NULL, 'snv', 0.779, -0.131, 3319200.0, 913, 922, 913, 60.0, 14.1084, 1.44649e-15, '[220 249 221 249]', -7.67508e-05, 6.5934, True, NULL, 'AS_FS', 0.689, 1756, 1444, 19314, 73762, 7966, 1094, 900, 2140, 69334, 470, 41976, 1678, 3042, 37366, 1558, 143332, 1046, 27154, 3314, 7712, 5900, 566, 10470, 22662, 2476, 13612, 64520, 3122, 430, 2504, 4.217e-05, 4.307e-05), ('chr18', 53252734, 53252735, 'G', '[{''alt'': ''A'', ''AC'': 20, ''AF'': 0.000139833, ''n_alt_alleles'': 1, ''AC_asj_female'': 0, ''AF_asj_female'': 0.0, ''nhomalt_asj_female'': 0, ''AC_eas_female'': 0, ''AF_eas_female'': 0.0, ''nhomalt_eas_female'': 0, ''AC_afr_male'': 9, ''AF_afr_male'': 0.000465549, ''nhomalt_afr_male'': 0, ''AC_female'': 11, ''AF_female'': 0.000149225, ''nhomalt_female'': 0, ''AC_fin_male'': 0, ''AF_fin_male'': 0.0, ''nhomalt_fin_male'': 0, ''AC_oth_female'': 1, ''AF_oth_female'': 0.000912409, ''nhomalt_oth_female'': 0, ''AC_ami'': 0, ''AF_ami'': 0.0, ''nhomalt_ami'': 0, ''AC_oth'': 1, ''AF_oth'': 0.000465983, ''nhomalt_oth'': 0, ''AC_male'': 9, ''AF_male'': 0.000129844, ''nhomalt_male'': 0, ''AC_ami_female'': 0, ''AF_ami_female'': 0.0, ''nhomalt_ami_female'': 0, ''AC_afr'': 19, ''AF_afr'': 0.000452446, ''nhomalt_afr'': 0, ''AC_eas_male'': 0, ''AF_eas_male'': 0.0, ''nhomalt_eas_male'': 0, ''AC_sas'': 0, ''AF_sas'': 0.0, ''nhomalt_sas'': 0, ''AC_nfe_female'': 0, ''AF_nfe_female'': 0.0, ''nhomalt_nfe_female'': 0, ''AC_asj_male'': 0, ''AF_asj_male'': 0.0, ''nhomalt_asj_male'': 0, ''AC_raw'': 20, ''AF_raw'': 0.000139534, ''nhomalt_raw'': 0, ''AC_oth_male'': 0, 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0.0, ''faf99_amr'': 0.0, ''faf95_nfe'': 0.0, ''faf99_nfe'': 0.0, ''faf95_eas'': 0.0, ''faf99_eas'': 0.0, ''vep'': array([{''allele'': ''A'', ''Consequence'': ''intron_variant&NMD_transcript_variant'', ''IMPACT'': ''MODIFIER'', ''SYMBOL'': ''DCC'', ''Gene'': ''ENSG00000187323'', ''Feature_type'': ''Transcript'', ''Feature'': ''ENST00000304775'', ''BIOTYPE'': ''nonsense_mediated_decay'', ''EXON'': None, ''INTRON'': ''11/18'', ''empty'': None},
        {''allele'': ''A'', ''Consequence'': ''intron_variant'', ''IMPACT'': ''MODIFIER'', ''SYMBOL'': ''DCC'', ''Gene'': ''ENSG00000187323'', ''Feature_type'': ''Transcript'', ''Feature'': ''ENST00000412726'', ''BIOTYPE'': ''protein_coding'', ''EXON'': None, ''INTRON'': ''11/27'', ''empty'': None},
        {''allele'': ''A'', ''Consequence'': ''intron_variant'', ''IMPACT'': ''MODIFIER'', ''SYMBOL'': ''DCC'', ''Gene'': ''ENSG00000187323'', ''Feature_type'': ''Transcript'', ''Feature'': ''ENST00000442544'', ''BIOTYPE'': ''protein_coding'', ''EXON'': None, ''INTRON'': ''12/28'', ''empty'': None},
        {''allele'': ''A'', ''Consequence'': ''intron_variant'', ''IMPACT'': ''MODIFIER'', ''SYMBOL'': ''DCC'', ''Gene'': ''ENSG00000187323'', ''Feature_type'': ''Transcript'', ''Feature'': ''ENST00000581580'', ''BIOTYPE'': ''protein_coding'', ''EXON'': None, ''INTRON'': ''9/26'', ''empty'': None}],
       dtype=object)}                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]', '[''rs559443127'']', 14845.0, '[''PASS'']', '[]', 143028, NULL, NULL, 'snv', 0.18, 0.0, 3988800.0, 1100, 1108, 1100, 60.0, 13.4955, 2.45313, '[229 325 248 298]', -0.000139554, 4.8803, NULL, NULL, 'AS_FS', 0.541, 1756, 1444, 19332, 73714, 7962, 1096, 900, 2146, 69314, 470, 41994, 1672, 3044, 37326, 1562, 143334, 1050, 27132, 3318, 7696, 5890, 566, 10466, 22662, 2478, 13586, 64458, 3116, 430, 2504, 9.213e-05, 9.202e-05);