nils-herrmann/clean_scirepeval huggingface dataset:
A long-time limit for world subway networks

We study the temporal evolution of the structure of the world's largest subway networks in an exploratory manner. We show that, remarkably, all these networks converge to a shape that shares similar generic features despite their geographical and economic differences. This limiting shape is made of a core with branches radiating from it. For most of these networks, the average degree of a node (station) within the core has a value of order 2.5 and the proportion of k = 2 nodes in the core is larger than 60 per cent. The number of branches scales roughly as the square root of the number of stations, the current proportion of branches represents about half of the total number of stations, and the average diameter of branches is about twice the average radial extension of the core. Spatial measures such as the number of stations at a given distance to the barycentre display a first regime which grows as r2 followed by another regime with different exponents, and eventually saturates. These results—difficult to interpret in the framework of fractal geometry—confirm and yield a natural explanation in the geometric picture of this core and their branches: the first regime corresponds to a uniform core, while the second regime is controlled by the interstation spacing on branches. The apparent convergence towards a unique network shape in the temporal limit suggests the existence of dominant, universal mechanisms governing the evolution of these structures.
Partitioning Breaks Communities

Considering a clique as a conservative definition of community structure, we examine how graph partitioning algorithms interact with cliques. Many popular community-finding algorithms partition the entire graph into non-overlapping communities. We show that on a wide range of empirical networks, from different domains, significant numbers of cliques are split across separate partitions, as produced by such algorithms. We examine the largest connected component of the sub graph formed by retaining only edges in cliques, and apply partitioning strategies that explicitly minimise the number of cliques split. We conclude that, due to the connectedness of many networks, any community finding algorithm that produces partitions must fail to find at least some significant structures. Moreover, contrary to traditional intuition, in some empirical networks, strong ties and cliques frequently do cross community boundaries.
Higgs boson signals in lambda-SUSY with a Scale Invariant Superpotential

We reconsider the SUSY model, in which the mass of the Higgs boson is raised already at tree level up to about 200 GeV via an additional interaction in the superpotential between the Higgs bosons and a Singlet, focusing on a scale invariant superpotential. After a detailed analysis of the allowed region in parameter space, which includes constraints coming from the absence of spontaneous CP violation and of unrealistic minima, we study the scalar mass spectrum, the production rate and the decay modes of the lightest scalar, nding that in general both the production rate and the Branching Ratio into gauge bosons can be reduced with respect of those of the standard Higgs, causing it to be hardly detected in the rst run of the LHC.
Flux periodicities and quantum hair on holographic superconductors.

Superconductors in a cylindrical geometry respond periodically to a cylinder-threading magnetic flux, with the period changing from hc/2e to hc/e depending on whether the Aharonov-Bohm effects are suppressed. We show that holographic superconductors present a similar phenomenon, and that the different periodicities follow from classical no-hair theorems. We also give the Ginzburg-Landau description of the period-doubling phenomenon.
Black hole accretion and host galaxies of obscured quasars in XMM-COSMOS

We explore the connection between black hole growth at the center of obscured quasars selected from the XMM-COSMOS survey and the physical properties of their host galaxies. We study a bolometric regime ( ⟨ L_(bol) ⟩ = 8 × 10^(45) erg s^(-1)) where several theoretical models invoke major galaxy mergers as the main fueling channel for black hole accretion. 
Methods. To derive robust estimates of the host galaxy properties, we use an SED fitting technique to distinguish the AGN and host galaxy emission. We evaluate the effect on galaxy properties estimates of being unable to remove the nuclear emission from the SED. The superb multi-wavelength coverage of the COSMOS field allows us to obtain reliable estimates of the total stellar masses and star formation rates (SFRs) of the hosts. We supplement this information with a morphological analysis of the ACS/HST images, optical spectroscopy, and an X-ray spectral analysis. 
Results. We confirm that obscured quasars mainly reside in massive galaxies (M_⋆ > 10^(10)M_⊙) and that the fraction of galaxies hosting such powerful quasars monotonically increases with the stellar mass. We stress the limitation of the use of rest-frame color − magnitude diagrams as a diagnostic tool for studying galaxy evolution and inferring the influence that AGN activity can have on such a process. We instead use the correlation between SFR and stellar mass found for star-forming galaxies to discuss the physical properties of the hosts. We find that at z ~ 1, ≈62% of Type-2 QSOs hosts are actively forming stars and that their rates are comparable to those measured for normal star-forming galaxies. The fraction of star-forming hosts increases with redshift: ≈ 71% at z ~ 2, and 100% at z ~ 3. We also find that the evolution from z ~ 1 to z ~ 3 of the specific SFR of the Type-2 QSO hosts is in excellent agreement with that measured for star-forming galaxies. From the morphological analysis, we conclude that most of the objects are bulge-dominated galaxies, and that only a few of them exhibit signs of recent mergers or disks. Finally, bulge-dominated galaxies tend to host Type-2 QSOs with low Eddington ratios (λ 0.1).
Doubly resonant ultrachirped pulses

Ultrachirped pulses for which the frequency chirp is of the order of the transition frequency of a two-level atom are examined. When the chirp is large enough, the resonance may be crossed twice, for positive and negative quadrature frequencies. In this scenario the analytic signal and quadrature decompositions of the field into amplitude and phase factors turn out to be quite different. The corresponding interaction pictures are strictly equivalent, but only as long as approximations are not applied. The domain of validity of the formal rotating wave approximation is dramatically enhanced using the analytic signal representation.
Entanglement in random pure states: spectral density and average von Neumann entropy

Quantum entanglement plays a crucial role in quantum information, quantum teleportation and quantum computation. The information about the entanglement content between subsystems of the composite system is encoded in the Schmidt eigenvalues. We derive here closed expressions for the spectral density of Schmidt eigenvalues for all three invariant classes of random matrix ensembles. We also obtain exact results for average von Neumann entropy. We find that maximum average entanglement is achieved if the system belongs to the symplectic invariant class.
THE CHANDRA DEEP FIELD-SOUTH SURVEY: 4 Ms SOURCE CATALOGS

We present source catalogs for the 4 Ms Chandra Deep Field-South (CDF-S), which is the deepest Chandra survey to date and covers an area of 464.5 arcmin2. We provide a main Chandra source catalog, which contains 740 X-ray sources that are detected with wavdetect at a false-positive probability threshold of 10−5 in at least one of three X-ray bands (0.5–8 keV, full band; 0.5–2 keV, soft band; and 2–8 keV, hard band) and also satisfy a binomial-probability source-selection criterion of P < 0.004 (i.e., the probability of sources not being real is less than 0.004); this approach is designed to maximize the number of reliable sources detected. A total of 300 main-catalog sources are new compared to the previous 2 Ms CDF-S main-catalog sources. We determine X-ray source positions using centroid and matched-filter techniques and obtain a median positional uncertainty of ≈0.″42. We also provide a supplementary catalog, which consists of 36 sources that are detected with wavdetect at a false-positive probability threshold of 10−5, satisfy the condition of 0.004 < P < 0.1, and have an optical counterpart with R < 24. Multiwavelength identifications, basic optical/infrared/radio photometry, and spectroscopic/photometric redshifts are provided for the X-ray sources in the main and supplementary catalogs. Seven hundred sixteen (≈97%) of the 740 main-catalog sources have multiwavelength counterparts, with 673 (≈94% of 716) having either spectroscopic or photometric redshifts. The 740 main-catalog sources span broad ranges of full-band flux and 0.5–8 keV luminosity; the 300 new main-catalog sources span similar ranges although they tend to be systematically lower. Basic analyses of the X-ray and multiwavelength properties of the sources indicate that >75% of the main-catalog sources are active galactic nuclei (AGNs); of the 300 new main-catalog sources, about 35% are likely normal and starburst galaxies, reflecting the rise of normal and starburst galaxies at the very faint flux levels uniquely accessible to the 4 Ms CDF-S. Near the center of the 4 Ms CDF-S (i.e., within an off-axis angle of 3′), the observed AGN and galaxy source densities have reached 9800+1300 − 1100 deg−2 and 6900+1100 − 900 deg−2, respectively. Simulations show that our main catalog is highly reliable and is reasonably complete. The mean backgrounds (corrected for vignetting and exposure-time variations) are 0.063 and 0.178 counts Ms−1 pixel−1 (for a pixel size of 0.″492) for the soft and hard bands, respectively; the majority of the pixels have zero background counts. The 4 Ms CDF-S reaches on-axis flux limits of ≈3.2 × 10−17, 9.1 × 10−18, and 5.5 × 10−17 erg cm−2 s−1 for the full, soft, and hard bands, respectively. An increase in the CDF-S exposure time by a factor of ≈2–2.5 would provide further significant gains and probe key unexplored discovery space.
Structural preferential attachment: network organization beyond the link.

We introduce a mechanism which models the emergence of the universal properties of complex networks, such as scale independence, modularity and self-similarity, and unifies them under a scale-free organization beyond the link. This brings a new perspective on network organization where communities, instead of links, are the fundamental building blocks of complex systems. We show how our simple model can reproduce social and information networks by predicting their community structure and more importantly, how their nodes or communities are interconnected, often in a self-similar manner.
A call to arms: revisiting database design

Good database design is crucial to obtain a sound, consistent database, and - in turn - good database design methodologies are the best way to achieve the right design. These methodologies are taught to most Computer Science undergraduates, as part of any Introduction to Database class. They can be considered part of the "canon", and indeed, the overall approach to database design has been unchanged for years. Moreover, none of the major database research assessments identify database design as a strategic research direction. 
Should we conclude that database design is a solved problem? 
Our thesis is that database design remains a critical unsolved problem. Hence, it should be the subject of more research. Our starting point is the observation that traditional database design is not used in practice - and if it were used it would result in designs that are not well adapted to current environments. In short, database design has failed to keep up with the times. In this paper, we put forth arguments to support our viewpoint, analyze the root causes of this situation and suggest some avenues of research.
Interbreeding conditions for explaining Neandertal DNA in living humans: the nonneutral case

We consider here an extension of a previous work by Neves and Serva, still unpublished, which estimates the amount of interbreeding between anatomically modern Africans and Neandertals necessary for explaining the experimental fact that 1 to 4% of the DNA in non-African living humans is of Neandertal origin. In that work we considered that Africans and Neandertals had the same fitness (neutral hypothesis) and Neandertal extinction was thus an event of fortune. In this work we consider that Africans had larger fitnesses. We show results for four values for the fitness difference: 1%, 5%, 10% and 20% and compare them with the corresponding neutral results. Some technical differences with respect to the neutral case appear. We conclude that even with 1% fitness difference Neandertals extinction comes up in too small a time, so the neutral model looks more suitable for explaining the known data on occupation of some caves in Israel for a very long time, alternately by Africans and Neandertals.
Dynamics of rising magnetized cavities and ultrahigh energy cosmic ray acceleration in clusters of galaxies

We study the expansion of low-density cavities produced by active galactic nucleus jets in clusters of galaxies. The long-term stability of these cavities requires the presence of linked magnetic fields. We find solutions describing the self-similar expansion of structures containing large-scale electromagnetic fields. Unlike the force-free spheromak-like configurations, these solutions have no surface currents and, thus, are less susceptible to resistive decay. The cavities are internally confined by external pressure, with zero gradient at the surface. If the adiabatic index of the plasma within the cavity is Γ > 4/3, the expansion ultimately leads to the formation of large-scale current sheets. The resulting dissipation of the magnetic field can only partially offset the adiabatic and radiative losses of radio-emitting electrons. 
 
 
 
We demonstrate that if the formation of large-scale current sheets is accompanied by explosive reconnection of the magnetic field, the resulting reconnection layer can accelerate cosmic rays to ultrahigh energies. We speculate that the enhanced flux of ultrahigh energy cosmic rays towards Centaurus A originates at the cavities due to magnetic reconnection.
Two Higgs doublets with fourth-generation fermions: Models for TeV-scale compositeness

We construct a class of two Higgs doublets models with a 4th sequential generation of fermions that may effectively accommodate the low-energy characteristics and phenomenology of a dynamical electroweak symmetry breaking scenario which is triggered by the condensates of the 4th family fermions. In particular, we single out the heavy quarks by coupling the heavier Higgs doublet ({Phi}{sub h}) which possesses a much larger VEV only to them while the lighter doublet ({Phi}{sub {ell}) couples only to the light fermions. We study the constraints on these models from precision electroweak data as well as from flavor data. We also discuss some distinct new features that have direct consequences on the production and decays of the 4th family quarks and leptons in high-energy colliders; in particular, the conventional search strategies for t{prime} and b{prime} may need to be significantly revised.
Discrete Quantum Processes

A discrete quantum process is defined as a sequence of local states $\rho_t$, $t=0,1,2,...$, satisfying certain conditions on an $L_2$ Hilbert space $H$. If $\rho =\lim\rho_t$ exists, then $\rho$ is called a global state for the system. In important cases, the global state does not exist and we must then work with the local states. In a natural way, the local states generate a sequence of quantum measures which in turn define a single quantum measure $\mu$ on the algebra of cylinder sets $\cscript$. We consider the problem of extending $\mu$ to other physically relevant sets in a systematic way. To this end we show that $\mu$ can be properly extended to a quantum measure $\mutilde$ on a "quadratic algebra" containing $\cscript$. We also show that a random variable $f$ can be "quantized" to form a self-adjoint operator $\fhat$ on $H$. We then employ $\fhat$ to define a quantum integral $\int fd\mutilde$. Various examples are given
Recent results in the search for dark matter with noble liquid detectors

The field of dark matter direct detection has seen important contributions in recent years from experiments involving liquid noble gases, specifically liquid argon and liquid xenon. These detection media offer many properties deemed useful in this search, including fast scintillation response, charge readout, 3-D position reconstruction, and nuclear recoil discrimination. Part of the very rapid emergence and dominance of noble liquids is due to the fact that these technologies are easily scalable to nearly arbitrary size and mass. However, the physics impact of recent results has called into question our understanding of the low-energy response of these detection media, in light of apparent contradictions with a possible low-mass WIMP signal observed in the DAMA/LIBRA and CoGeNT experiments. I discuss recent results and examine the details of this inconsistency.
Assessing the consistency of community structure in complex networks

In recent years, community structure has emerged as a key component of complex network analysis. As more data have been collected, researchers have begun investigating changing community structure across multiple networks. Several methods exist to analyze changing communities, but most of these are limited to evolution of a single network over time. In addition, most of the existing methods are more concerned with change at the community level than at the level of the individual node. In this paper, we introduce scaled inclusivity, which is a method to quantify the change in community structure across networks. Scaled inclusivity evaluates the consistency of the classification of every node in a network independently. In addition, the method can be applied cross sectionally as well as longitudinally. In this paper, we calculate the scaled inclusivity for a set of simulated networks of United States cities and a set of real networks consisting of teams that play in the top division of American college football. We found that scaled inclusivity yields reasonable results for the consistency of individual nodes in both sets of networks. We propose that scaled inclusivity may provide a useful way to quantify the change in a network's community structure.
Emergence of Bursts and Communities in Evolving Weighted Networks

Understanding the patterns of human dynamics and social interaction and the way they lead to the formation of an organized and functional society are important issues especially for techno-social development. Addressing these issues of social networks has recently become possible through large scale data analysis of mobile phone call records, which has revealed the existence of modular or community structure with many links between nodes of the same community and relatively few links between nodes of different communities. The weights of links, e.g., the number of calls between two users, and the network topology are found correlated such that intra-community links are stronger compared to the weak inter-community links. This feature is known as Granovetter's “The strength of weak ties” hypothesis. In addition to this inhomogeneous community structure, the temporal patterns of human dynamics turn out to be inhomogeneous or bursty, characterized by the heavy tailed distribution of time interval between two consecutive events, i.e., inter-event time. In this paper, we study how the community structure and the bursty dynamics emerge together in a simple evolving weighted network model. The principal mechanisms behind these patterns are social interaction by cyclic closure, i.e., links to friends of friends and the focal closure, links to individuals sharing similar attributes or interests, and human dynamics by task handling process. These three mechanisms have been implemented as a network model with local attachment, global attachment, and priority-based queuing processes. By comprehensive numerical simulations we show that the interplay of these mechanisms leads to the emergence of heavy tailed inter-event time distribution and the evolution of Granovetter-type community structure. Moreover, the numerical results are found to be in qualitative agreement with empirical analysis results from mobile phone call dataset.
Hypergraphs and City Street Networks

The map of a city's streets constitutes a particular case of spatial complex network. However a city is not limited to its topology: it is above all a geometrical object whose particularity is to organize into short and long axes called streets. In this article we present and discuss two algorithms aiming at recovering the notion of street from a graph representation of a city. Then we show that the length of the so-called streets scales logarithmically. This phenomenon leads to assume that a city is shaped into a logic of extension and division of space.
THE PHYSICS OF THE “HEARTBEAT” STATE OF GRS 1915+105

We present the first detailed phase-resolved spectral analysis of a joint Chandra High-Energy Transmission Grating Spectrometer and Rossi X-ray Timing Explorer observation of the ρ variability class in the microquasar GRS 1915+105. The ρ cycle displays a high-amplitude, double-peaked flare that recurs roughly every 50 s and is sometimes referred to as the “heartbeat” oscillation. The spectral and timing properties of the oscillation are consistent with the radiation pressure instability and the evolution of a local Eddington limit in the inner disk. We exploit strong variations in the X-ray continuum, iron emission lines, and the accretion disk wind to probe the accretion geometry over nearly six orders of magnitude in distance from the black hole. At small scales (1–10 Rg), we detect a burst of bremsstrahlung emission that appears to occur when a portion of the inner accretion disk evaporates due to radiation pressure. Jet activity, as inferred from the appearance of a short X-ray hard state, seems to be limited to times near minimum luminosity, with a duty cycle of ∼10%. On larger scales (105–106 Rg), we use detailed photoionization arguments to track the relationship between the fast X-ray variability and the accretion disk wind. For the first time, we are able to show that changes in the broadband X-ray spectrum produce changes in the structure and density of the accretion disk wind on timescales as short as 5 s. These results clearly establish a causal link between the X-ray oscillations and the disk wind and therefore support the existence of a disk–jet–wind connection. Furthermore, our analysis shows that the mass-loss rate in the wind may be sufficient to cause long-term oscillations in the accretion rate, leading to state transitions in GRS 1915+105.