nils-herrmann/clean_scirepeval huggingface dataset:
Non-invasive Analyte Access and Sensing through Eccrine Sweat : Challenges and Outlook circa 2016

Although wearable technologies have recently seen a water-shed moment in their commercialization, the introduction of new capabilities has not kept pace with rapidly rising expectations in the medical, industrial, and consumer markets. This is partly because today s wearable technologies remain heavily reliant on decades-old techniques for accessing information from the body. Many wearable technologies, for example, simply electrically or optically interrogate the body from outside skin, which severely limits the specificity of their detection. The identification and quantification of most biomarkers (ions, molecules, proteins, etc.), is instead only possible through a probe that relies on direct chemical interaction with the analyte. Creating such chemical sensors in a wearable format remains a significant challenge, but, as revealed in this special issue of Electroanalysis, appears promising. However, even if you can make such sensors , there remains a second, perhaps even greater challenge: how does one reliably and non-invasively extract biomarker analytes from the body? It has been recently postulated by several groups that this second challenge can be resolved by sampling and sensing of analytes in eccrine sweat , as supported by emergent theory [2] and recent technological demonstrations [1–6]. This article reviews the status of wearable biosensing of analytes in eccrine sweat, including both challenges and outlook circa 2016. Eccrine sweat has many inherent advantages over other non-invasive biofluids (tears, saliva, urine), but also has numerous and unique challenges. This article may serve useful for those considering exploration of sweat biosensing, but also raises many issues that are relevant to biosensing with other non-invasive or minimally invasive techniques.
Identifying Exoplanets with Deep Learning : A Five-planet Resonant Chain around Kepler-80 and an Eighth Planet around Kepler-90

NASA’s Kepler Space Telescope was designed to determine the frequency of Earth-sized planets orbiting Sun-like stars, but these planets are on the very edge of the mission’s detection sensitivity. Accurately determining the occurrence rate of these planets will require automatically and accurately assessing the likelihood that individual candidates are indeed planets, even at low signal-to-noise ratios. We present a method for classifying potential planet signals using deep learning, a class of machine learning algorithms that have recently become state-of-theart in a wide variety of tasks. We train a deep convolutional neural network to predict whether a given signal is a transiting exoplanet or a false positive caused by astrophysical or instrumental phenomena. Our model is highly effective at ranking individual candidates by the likelihood that they are indeed planets: 98.8% of the time it ranks plausible planet signals higher than false-positive signals in our test set. We apply our model to a new set of candidate signals that we identified in a search of known Kepler multi-planet systems. We statistically validate two new planets that are identified with high confidence by our model. One of these planets is part of a five-planet resonant chain around Kepler-80, with an orbital period closely matching the prediction by three-body Laplace relations. The other planet orbits Kepler-90, a star that was previously known to host seven transiting planets. Our discovery of an eighth planet brings Kepler-90 into a tie with our Sun as the star known to host the most planets.
Toward an Ecological Theory of Adaptation and Aging

1.3 The environmental docility hypothesis suggests that environmental stimuli ("press", in Murray's terms) have a greater demand quality as the competence of the individual decreases. The dynamics of ecological transactions are considered as a function of personal competence, strength of environmental press, the dual characteristics of the individual's response (affective quality and adaptiveness of behavior), adaptation level, and the optimization function. Behavioral homeostasis is maintained by the individual as both respondent and initiator in interaction with his environment. Hypotheses are suggested to account for striving vs. relaxation and for changes in the individual's level of personal competence. Four transaction-al types discussed are environmental engineering, rehabilitation and therapy, individual growth, and active change of the environment. Recent work in the psychology of stimulation (1) has led to theoretical advances in the area of social ecology. We propose an elaboration in this area that is middle-range, in the sense of attempting to account for a limited aspect of human behavior. This contribution to the theory of man-environment relationships deals with the aspects of human responses that can be viewed in evaluative terms, that is, behavior that can be rated on the continuum of adaptiveness, and inner states that can be rated on the continuum of positive to negative. This is, perhaps, a limited view of the human response repertory, but it stems from the traditional concern of the psychologist with mental health and mental illness. Similarly, our view of environment for this purpose is limited to the "demand quality" of the environment, an abstraction that represents only one of many ways of dimensionalizing the environment. We shall use our knowledge from the area of gerontology to provide content for the theoretical structure, but suggest that the constructs are more generally applicable to any area involving the understanding of mental or social pathology [see Lawton and Nahemow, (2) for a more complete discussion]. One way to begin is to look at the old ecological equation B = f (P, E) to acknowledge its veracity and familiarity, but linger on a few of its implications: 1. All behavior is transactional, that is, not explainable solely on the basis of knowledge about either the person behaving or the environment in which it occurs.
A Brief Overview of the Developments of the Cognitive Radio Technology

Cognitive radio’s rising popularity among various engineers, scientists and researchers can be credited to the increasing number of users of wireless technology and the radio spectrum which is limited. In this paper, various advances which have been made so far to improvise cognitive radio technology have been discussed in brief to give the reader an overview of this emerging technology. The basics of cognitive radio networks are introduced first and then various developments on different aspects of this technology are discussed.
Preliminary comparison of techniques for dealing with imbalance in software defect prediction

Imbalanced data is a common problem in data mining when dealing with classification problems, where samples of a class vastly outnumber other classes. In this situation, many data mining algorithms generate poor models as they try to optimize the overall accuracy and perform badly in classes with very few samples. Software Engineering data in general and defect prediction datasets are not an exception and in this paper, we compare different approaches, namely sampling, cost-sensitive, ensemble and hybrid approaches to the problem of defect prediction with different datasets preprocessed differently. We have used the well-known NASA datasets curated by Shepperd et al. There are differences in the results depending on the characteristics of the dataset and the evaluation metrics, especially if duplicates and inconsistencies are removed as a preprocessing step.
 Further Results and replication package: http://www.cc.uah.es/drg/ease14
A Markov based image forgery detection approach by analyzing CFA artifacts

The image acquisition device, the light is filtered through a Color Filter Array (CFA), where each pixel captures only one color (from Red, Green, and Blue), while others are calibrated. This process is known as interpolation process, and the artifacts introduced are called CFA or interpolation artifacts. The structure of these artifacts in the image is disturbed while a forgery is introduced in an image. In this paper, a high-order statistical approach is proposed to detect the inconsistencies in the artifacts of different parts of the image to expose any forgery present. The Markov Transition Probability Matrix (MTPM) is employed to develop various features that will detect the presence or absence of CFA artifacts in a particular region of the image. The Markov random process is applied because it provides an enhanced efficiency and reduced computational complexity for the forgery detection model. The algorithm is tested on 2 × 2 pixel block of the image which provides the results of a fine quality. There is no prior information of the location of the forged region of the image. The algorithm is tested on various images, taken from various social networking websites. The proposed forgery detection technique outperforms the existing state-of-the-art techniques for the different forgery scenarios by providing an average accuracy of 90.58%.
Auto-encoder bottleneck features using deep belief networks

Neural network (NN) bottleneck (BN) features are typically created by training a NN with a middle bottleneck layer. Recently, an alternative structure was proposed which trains a NN with a constant number of hidden units to predict output targets, and then reduces the dimensionality of these output probabilities through an auto-encoder, to create auto-encoder bottleneck (AE-BN) features. The benefit of placing the BN after the posterior estimation network is that it avoids the loss in frame classification accuracy incurred by networks that place the BN before the softmax. In this work, we investigate the use of pre-training when creating AE-BN features. Our experiments indicate that with the AE-BN architecture, pre-trained and deeper NNs produce better AE-BN features. On a 50-hour English Broadcast News task, the AE-BN features provide over a 1% absolute improvement compared to a state-of-the-art GMM/HMM with a WER of 18.8% and pre-trained NN hybrid system with a WER of 18.4%. In addition, on a larger 430-hour Broadcast News task, AE-BN features provide a 0.5% absolute improvement over a strong GMM/HMM baseline with a WER of 16.0%. Finally, system combination with the GMM/HMM baseline and AE-BN systems provides an additional 0.5% absolute on 430 hours over the AE-BN system alone, yielding a final WER of 15.0%.
RDF in the clouds: a survey

The Resource Description Framework (RDF) pioneered by the W3C is increasingly being adopted to model data in a variety of scenarios, in particular data to be published or exchanged on the Web. Managing large volumes of RDF data is challenging, due to the sheer size, the heterogeneity, and the further complexity brought by RDF reasoning. To tackle the size challenge, distributed storage architectures are required. Cloud computing is an emerging paradigm massively adopted in many applications for the scalability, fault-tolerance, and elasticity feature it provides, enabling the easy deployment of distributed and parallel architectures. In this article, we survey RDF data management architectures and systems designed for a cloud environment, and more generally, those large-scale RDF data management systems that can be easily deployed therein. We first give the necessary background, then describe the existing systems and proposals in this area, and classify them according to dimensions related to their capabilities and implementation techniques. The survey ends with a discussion of open problems and perspectives.
Philosophical conceptions of the self: implications for cognitive science

Several recently developed philosophical approaches to the self promise to enhance the exchange of ideas between the philosophy of the mind and the other cognitive sciences. This review examines two important concepts of self: the 'minimal self', a self devoid of temporal extension, and the 'narrative self', which involves personal identity and continuity across time. The notion of a minimal self is first clarified by drawing a distinction between the sense of self-agency and the sense of self-ownership for actions. This distinction is then explored within the neurological domain with specific reference to schizophrenia, in which the sense of self-agency may be disrupted. The convergence between the philosophical debate and empirical study is extended in a discussion of more primitive aspects of self and how these relate to neonatal experience and robotics. The second concept of self, the narrative self, is discussed in the light of Gazzaniga's left-hemisphere 'interpreter' and episodic memory. Extensions of the idea of a narrative self that are consistent with neurological models are then considered. The review illustrates how the philosophical approach can inform cognitive science and suggests that a two-way collaboration may lead to a more fully developed account of the self.
Attribute Based Access Control for Big Data Applications by Query Modification

We present concepts which can be used for the efficient implementation of Attribute Based Access Control (ABAC) in large applications using maybe several data storage technologies, including Hadoop, NoSQL and relational database systems. The ABAC authorization process takes place in two main stages. Firstly a sequence of permissions is derived which specifies permitted data to be retrieved for the user's transaction. Secondly, query modification is used to augment the user's transaction with code which implements the ABAC controls. This requires the storage technologies to support a high-level language such as SQL or similar. The modified user transactions are then optimized and processed using the full functionality of the underlying storage systems. We use an extended ABAC model (TCM2) which handles negative permissions and overrides in a single permissions processing mechanism. We illustrate these concepts using a compelling electronic health records scenario.
Distributed denial of service attacks

We discuss distributed denial of service attacks in the Internet. We were motivated by the widely known February 2000 distributed attacks on Yahoo!, Amazon.com, CNN.com, and other major Web sites. A denial of service is characterized by an explicit attempt by an attacker to prevent legitimate users from using resources. An attacker may attempt to: “flood” a network and thus reduce a legitimate user’s bandwidth, prevent access to a service, or disrupt service to a specific system or a user. We describe methods and techniques used in denial of service attacks, and we list possible defenses. In our study, we simulate a distributed denial of service attack using ns-2 network simulator. We examine how various queuing algorithms implemented in a network router perform during an attack, and whether legitimate users can obtain desired bandwidth. We find that under persistent denial of service attacks, class based queuing algorithms can guarantee bandwidth for certain classes of input flows.
Urban computing with taxicabs

Urban computing for city planning is one of the most significant applications in Ubiquitous computing. In this paper we detect flawed urban planning using the GPS trajectories of taxicabs traveling in urban areas. The detected results consist of 1) pairs of regions with salient traffic problems and 2) the linking structure as well as correlation among them. These results can evaluate the effectiveness of the carried out planning, such as a newly built road and subway lines in a city, and remind city planners of a problem that has not been recognized when they conceive future plans. We conduct our method using the trajectories generated by 30,000 taxis from March to May in 2009 and 2010 in Beijing, and evaluate our results with the real urban planning of Beijing.
LSTM-Based Hierarchical Denoising Network for Android Malware Detection

Mobile security is an important issue on Android platform. Most malware detection methods based on machine learning models heavily rely on expert knowledge for manual feature engineering, which are still difficult to fully describe malwares. In this paper, we present LSTM-based hierarchical denoise network (HDN), a novel static Android malware detection method which uses LSTM to directly learn from the raw opcode sequences extracted from decompiled Android files. However, most opcode sequences are too long for LSTM to train due to the gradient vanishing problem. Hence, HDN uses a hierarchical structure, whose first-level LSTM parallelly computes on opcode subsequences (we called them method blocks) to learn the dense representations; then the secondlevel LSTM can learn and detect malware through method block sequences. Considering that malicious behavior only appears in partial sequence segments, HDN uses method block denoise module (MBDM) for data denoising by adaptive gradient scaling strategy based on loss cache. We evaluate and compare HDN with the latest mainstream researches on three datasets. The results show that HDN outperforms these Android malware detection methods,and it is able to capture longer sequence features and has better detection efficiency thanN-gram-based malware detection which is similar to our method.
Developing learner corpus annotation for Chinese grammatical errors

This study describes the construction of the TOCFL (Test Of Chinese as a Foreign Language) learner corpus, including the collection and grammatical error annotation of 2,837 essays written by Chinese language learners originating from a total of 46 different mother-tongue languages. We propose hierarchical tagging sets to manually annotate grammatical errors, resulting in 33,835 inappropriate usages. Our built corpus has been provided for the shared tasks on Chinese grammatical error diagnosis. These demonstrate the usability of our learner corpus annotation.
A Time-based Cluster-Head Selection Algorithm for LEACH

A wireless sensor network consists of hundreds or thousands of small energy-limited sensors that are densely deployed in a large geographical region. It has been demonstrated that low-energy adaptive clustering hierarchy (LEACH) is an energy-efficient routing algorithm for wireless sensor networks (WSN). In this paper, we present a Time-based cluster-head selection algorithm for LEACH. We call this new protocol TB-LEACH. We state the principle of TB-LEACH and give the main flowchart and pseudo codes realizing TB-LEACH. We provide a comparison between our protocol and LEACH protocol. The implementation of this protocol is figured out by NS2. Simulation results show that our algorithm outperforms original LEACH by about 20% to 30% in terms of system lifetime.
Affective Image Retrieval via Multi-Graph Learning

Images can convey rich emotions to viewers. Recent research on image emotion analysis mainly focused on affective image classification, trying to find features that can classify emotions better. We concentrate on affective image retrieval and investigate the performance of different features on different kinds of images in a multi-graph learning framework. Firstly, we extract commonly used features of different levels for each image. Generic features and features derived from elements-of-art are extracted as low-level features. Attributes and interpretable principles-of-art based features are viewed as mid-level features, while semantic concepts described by adjective noun pairs and facial expressions are extracted as high-level features. Secondly, we construct single graph for each kind of feature to test the retrieval performance. Finally, we combine the multiple graphs together in a regularization framework to learn the optimized weights of each graph to efficiently explore the complementation of different features. Extensive experiments are conducted on five datasets and the results demonstrate the effectiveness of the proposed method.
Deep Inside Convolutional Networks: Visualising Image Classification Models and Saliency Maps

This paper addresses the visualisation of image classification models, learnt using deep Convolutional Networks (ConvNets). We consider two visualisation techniques, based on computing the gradient of the class score with respect to the input image. The first one generates an image, which maximises the class score , thus visualising the notion of the class, captured by a ConvNet. The second technique computes a class saliency map, specific to a given image and class. We show that such maps can be employed for weakly supervised object segmentation using classification ConvNets. Finally, we establish the connection between the gradient-based ConvNet visualisation methods and deconvolutional networks [13].
EEL: Machine-Independent Executable Editing

EEL (Executable Editing Library) is a library for building tools to analyze and modify an executable (compiled) program. The systems and languages communities have built many tools for error detection, fault isolation, architecture translation, performance measurement, simulation, and optimization using this approach of modifying executables. Currently, however, tools of this sort are difficult and time-consuming to write and are usually closely tied to a particular machine and operating system. EEL supports a machine- and system-independent editing model that enables tool builders to modify an executable without being aware of the details of the underlying architecture or operating system or being concerned with the consequences of deleting instructions or adding foreign code.
Analysis of Nonideal Behaviors Based on INL/DNL Plots for SAR ADCs

This paper presents a comprehensive investigation of several important error sources for the successive-approximation register (SAR) analog-to-digital converters (ADCs). The error sources that we discuss in this paper include the dynamic comparator offset, the dynamic gain error of digital-to-analog converter (DAC), the capacitor mismatch of capacitive DAC, the incomplete settling of DAC, the undershoot of reference voltage, and the input signal coupling. The integral/differential nonlinearities (INL/DNL) of SAR ADCs that are resulted from these error sources are analyzed and addressed. A diagnostic procedure is presented to identify the possible error sources based on the INL/DNL plots. In addition, design suggestions for overcoming these problems are also offered and recommended in this paper.
The Relevance of Data Warehousing and Data Mining in the Field of Evidence-based Medicine to Support Healthcare Decision Making

Evidence-based medicine is a new direction in modern healthcare. Its task is to prevent, diagnose and medicate diseases using medical evidence. Medical data about a large patient population is analyzed to perform healthcare management and medical research. In order to obtain the best evidence for a given disease, external clinical expertise as well as internal clinical experience must be available to the healthcare practitioners at right time and in the right manner. External evidence-based knowledge can not be applied directly to the patient without adjusting it to the patient’s health condition. We propose a data warehouse based approach as a suitable solution for the integration of external evidence-based data sources into the existing clinical information system and data mining techniques for finding appropriate therapy for a given patient and a given disease. Through integration of data warehousing, OLAP and data mining techniques in the healthcare area, an easy to use decision support platform, which supports decision making process of care givers and clinical managers, is built. We present three case studies, which show, that a clinical data warehouse that facilitates evidence-based medicine is a reliable, powerful and user-friendly platform for strategic decision making, which has a great relevance for the practice and acceptance of evidence-based medicine. data mining, data warehousing, decision-support systems, evidence-based medicine.