nils-herrmann/clean_scirepeval huggingface dataset:
Plant pathogens and integrated defence responses to infection

Plants cannot move to escape environmental challenges. Biotic stresses result from a battery of potential pathogens: fungi, bacteria, nematodes and insects intercept the photosynthate produced by plants, and viruses use replication machinery at the host's expense. Plants, in turn, have evolved sophisticated mechanisms to perceive such attacks, and to translate that perception into an adaptive response. Here, we review the current knowledge of recognition-dependent disease resistance in plants. We include a few crucial concepts to compare and contrast plant innate immunity with that more commonly associated with animals. There are appreciable differences, but also surprising parallels.
Parallel Formulations of Decision-Tree Classification Algorithms

Classification decision tree algorithms are used extensively for data mining in many domains such as retail target marketing, fraud detection, etc. Highly parallel algorithms for constructing classification decision trees are desirable for dealing with large data sets in reasonable amount of time. Algorithms for building classification decision trees have a natural concurrency, but are difficult to parallelize due to the inherent dynamic nature of the computation. In this paper, we present parallel formulations of classification decision tree learning algorithm based on induction. We describe two basic parallel formulations. One is based on Synchronous Tree Construction Approach and the other is based on Partitioned Tree Construction Approach. We discuss the advantages and disadvantages of using these methods and propose a hybrid method that employs the good features of these methods. We also provide the analysis of the cost of computation and communication of the proposed hybrid method. Moreover, experimental results on an IBM SP-2 demonstrate excellent speedups and scalability.
HOW TO IMPROVE FIRM PERFORMANCE USING BIG DATA ANALYTICS CAPABILITY

The recent interest in big data has led many companies to develop big data analytics capability (BDAC) in order to enhance firm performance (FPER). However, BDAC pays off for some companies but not for others. It appears that very few have achieved a big impact through big data. To address this challenge, this study proposes a BDAC model drawing on the resource-based theory (RBT) and the entanglement view of sociomaterialism. The findings show BDAC as a hierarchical model, which consists of three primary dimensions (i.e., management, technology, and talent capability) and 11 subdimensions (i.e., planning, investment, coordination, control, connectivity, compatibility, modularity, technology management knowledge, technical knowledge, business knowledge and relational knowledge). The findings confirm the value of the entanglement conceptualization of the higher-order BDAC model and its impact on FPER. The results also illuminate the significant moderating impact of analytics capability–business strategy alignment on the BDAC FPER relationship.
A Novel Quad-Polarization Agile Patch Antenna

In this communication we present a novel polarization-agile microstrip antenna design. To dynamically change the polarization state, the radiating patch is fed by a tunable quasi-lumped coupler. The whole structure can be dynamically altered to radiate electromagnetic waves with vertical linear, horizontal linear, right-handed circular or left-handed circular polarization simply by changing the operating mode of the quasi-lumped coupler. Due to its topology the coupler is simply reconfigured by switching the bias of two varactor diodes via a very simple DC bias circuitry: no additional capacitors or inductors are required. A prototype is fabricated with a 0.762-mm-thick upper layer substrate for the radiating element and a 0.130-mm-thick layer substrate for the coupler circuit, both with the same dielectric material relative permittivity of 2.22. The simulated and measured scattering parameters, the axial ratio in circular radiation-mode and the cross-polarization level in linear mode, the gain and the radiation patterns are presented. The agile polarization capabilities of this new antenna, as demonstrated in this communication, underscore its suitability for modern wireless communications in a multi-path propagation environment.
Visualization of complex attacks and state of attacked network

This paper deals with the visualization of complex attacks. “Complex attacks” is used here to denote the type of attack which consists of a sequence of related events, namely a multistep, DDoS attack and alike. While there are numerous systems to visualize events that occur in the network, most of them are too complex to perceive, and require several visualization modes. This work presents a technique whereby the operator, using visualization alone, is able to display the full picture of events occurring in the network. The main feature of this method is the high recognition ratio of complex attacks as the sequence of constituent common events.
Back propagation neural network with adaptive differential evolution algorithm for time series forecasting

The back propagation neural network (BPNN) can easily fall into the local minimum point in time series forecasting. A hybrid approach that combines the adaptive differential evolution (ADE) algorithm with BPNN, called ADE–BPNN, is designed to improve the forecasting accuracy of BPNN. ADE is first applied to search for the global initial connection weights and thresholds of BPNN. Then, BPNN is employed to thoroughly search for the optimal weights and thresholds. Two comparative real-life series data sets are used to verify the feasibility and effectiveness of the hybrid method. The proposed ADE–BPNN can effectively improve forecasting accuracy relative to basic BPNN, autoregressive integrated moving average model (ARIMA), and other hybrid models.
m-SNE: Multiview Stochastic Neighbor Embedding

Dimension reduction has been widely used in real-world applications such as image retrieval and document classification. In many scenarios, different features (or multiview data) can be obtained, and how to duly utilize them is a challenge. It is not appropriate for the conventional concatenating strategy to arrange features of different views into a long vector. That is because each view has its specific statistical property and physical interpretation. Even worse, the performance of the concatenating strategy will deteriorate if some views are corrupted by noise. In this paper, we propose a multiview stochastic neighbor embedding (m-SNE) that systematically integrates heterogeneous features into a unified representation for subsequent processing based on a probabilistic framework. Compared with conventional strategies, our approach can automatically learn a combination coefficient for each view adapted to its contribution to the data embedding. This combination coefficient plays an important role in utilizing the complementary information in multiview data. Also, our algorithm for learning the combination coefficient converges at a rate of O(1/k2), which is the optimal rate for smooth problems. Experiments on synthetic and real data sets suggest the effectiveness and robustness of m-SNE for data visualization, image retrieval, object categorization, and scene recognition.
Entity Retrieval via Entity Factoid Hierarchy

We propose that entity queries are generated via a two-step process: users first select entity facts that can distinguish target entities from the others; and then choose words to describe each selected fact. Based on this query generation paradigm, we propose a new entity representation model named as entity factoid hierarchy. An entity factoid hierarchy is a tree structure composed of factoid nodes. A factoid node describes one or more facts about the entity in different information granularities. The entity factoid hierarchy is constructed via a factor graph model, and the inference on the factor graph is achieved by a modified variant of Multiple-try Metropolis algorithm. Entity retrieval is performed by decomposing entity queries and computing the query likelihood on the entity factoid hierarchy. Using an array of benchmark datasets, we demonstrate that our proposed framework significantly improves the retrieval performance over existing models.
Demystifying Arm TrustZone: A Comprehensive Survey

The world is undergoing an unprecedented technological transformation, evolving into a state where ubiquitous Internet-enabled “things” will be able to generate and share large amounts of security- and privacy-sensitive data. To cope with the security threats that are thus foreseeable, system designers can find in Arm TrustZone hardware technology a most valuable resource. TrustZone is a System-on-Chip and CPU system-wide security solution, available on today’s Arm application processors and present in the new generation Arm microcontrollers, which are expected to dominate the market of smart “things.” Although this technology has remained relatively underground since its inception in 2004, over the past years, numerous initiatives have significantly advanced the state of the art involving Arm TrustZone. Motivated by this revival of interest, this paper presents an in-depth study of TrustZone technology. We provide a comprehensive survey of relevant work from academia and industry, presenting existing systems into two main areas, namely, Trusted Execution Environments and hardware-assisted virtualization. Furthermore, we analyze the most relevant weaknesses of existing systems and propose new research directions within the realm of tiniest devices and the Internet of Things, which we believe to have potential to yield high-impact contributions in the future.
Does Twitter language reliably predict heart disease? A commentary on Eichstaedt et al. (2015a)

We comment on Eichstaedt et al.'s (2015a) claim to have shown that language patterns among Twitter users, aggregated at the level of US counties, predicted county-level mortality rates from atherosclerotic heart disease (AHD), with "negative" language being associated with higher rates of death from AHD and "positive" language associated with lower rates. First, we examine some of Eichstaedt et al.'s apparent assumptions about the nature of AHD, as well as some issues related to the secondary analysis of online data and to considering counties as communities. Next, using the data files supplied by Eichstaedt et al., we reproduce their regression- and correlation-based models, substituting mortality from an alternative cause of death-namely, suicide-as the outcome variable, and observe that the purported associations between "negative" and "positive" language and mortality are reversed when suicide is used as the outcome variable. We identify numerous other conceptual and methodological limitations that call into question the robustness and generalizability of Eichstaedt et al.'s claims, even when these are based on the results of their ridge regression/machine learning model. We conclude that there is no good evidence that analyzing Twitter data in bulk in this way can add anything useful to our ability to understand geographical variation in AHD mortality rates.
Manufacturing Analytics and Industrial Internet of Things

Over the last two decades, manufacturing across the globe has evolved to be more intel-ligent and data driven. In the age of industrial Internet of Things, a smart production unit can be perceived as a large connected industrial system of materials, parts, machines, tools, inventory, and logistics that can relay data and communicate with each other. While, traditionally, the focus has been on machine health and predictive maintenance, the manufacturing industry has also started focusing on analyzing data from the entire production line. These applications bring a new set of analytics challenges. Unlike tradi-tional data mining analysis, which consists of lean datasets (that is, datasets with few fea-tures), manufacturing has fat datasets. In addition, previous approaches to manufacturing analytics restricted themselves to small time periods of data. The latest advances in big data analytics allows researchers to do a deep dive into years of data. Bosch collects and utilizes all available information about its products to increase its understanding of complex linear and nonlinear relationships between parts, machines, and assembly lines. This helps in use cases such as the discovery of the root cause of internal defects. This article presents a case study and provides detail about challenges and approaches in data extraction, modeling, and visualization.
MRI Segmentation of the Human Brain: Challenges, Methods, and Applications

Image segmentation is one of the most important tasks in medical image analysis and is often the first and the most critical step in many clinical applications. In brain MRI analysis, image segmentation is commonly used for measuring and visualizing the brain's anatomical structures, for analyzing brain changes, for delineating pathological regions, and for surgical planning and image-guided interventions. In the last few decades, various segmentation techniques of different accuracy and degree of complexity have been developed and reported in the literature. In this paper we review the most popular methods commonly used for brain MRI segmentation. We highlight differences between them and discuss their capabilities, advantages, and limitations. To address the complexity and challenges of the brain MRI segmentation problem, we first introduce the basic concepts of image segmentation. Then, we explain different MRI preprocessing steps including image registration, bias field correction, and removal of nonbrain tissue. Finally, after reviewing different brain MRI segmentation methods, we discuss the validation problem in brain MRI segmentation.
Quotidian resilience: Exploring mechanisms that drive resilience from a perspective of everyday stress and coping

Resilience is often associated with extreme trauma or overcoming extraordinary odds. This way of thinking about resilience leaves most of the ontogenetic picture a mystery. In the following review we put forth the Everyday Stress Resilience Hypothesis where resilience is analyzed from a systems perspective and seen as a process of regulating everyday life stressors. Successful regulation accumulates into regulatory resilience which emerges during early development from successful coping with the inherent stress in typical interactions. These quotidian stressful events lead to activation of behavioral and physiologic systems. Stress that is effectively resolved in the short run and with reiteration over the long-term increases children's as well as adults' capacity to cope with more intense stressors. Infants, however, lack the regulatory capacities to take on this task by themselves. Therefore, through communicative and regulatory processes during infant-adult interactions, we demonstrate that the roots of regulatory resilience originate in infants' relationship with their caregiver and that maternal sensitivity can help or hinder the growth of resilience.
Haptic interaction in robot-assisted endoscopic surgery: a sensorized end-effector.

Conventional endoscopic surgery has some drawbacks that can be addressed by using robots. The robotic systems used for surgery are still in their infancy. A major deficiency is the lack of haptic feedback to the surgeon. In this paper, the benefits of haptic feedback in robot-assisted surgery are discussed. A novel robotic end-effector is then described that meets the requirements of endoscopic surgery and is sensorized for force/ torque feedback. The endoscopic end-effector is capable of non-invasively measuring its interaction with tissue in all the degrees of freedom available during endoscopic manipulation. It is also capable of remotely actuating a tip and measuring its interaction with the environment without using any sensors on the jaws. The sensorized end-effector can be used as the last arm of a surgical robot to incorporate haptic feedback and/or to evaluate skills and learning curves of residents and surgeons in endoscopic surgery.
Honeypots for employee information security awareness and education training: A conceptual EASY training model

The increasing pervasiveness of internet-connected systems means that such systems will continue to be exploited for criminal purposes by cybercriminals (including malicious insiders such as employees and vendors). The importance of protecting corporate system and intellectual property, and the escalating complexities of the online environment underscore the need for ongoing information security awareness and education training and the promotion of a culture of security among employees. Two honeypots were deployed at a private university based in Singapore. Findings from the analysis of the honeypot data are presented in this paper. This paper then examines how analysis of honeypot data can be used in employee information security awareness and education training. Adapting the Routine Activity Theory, a criminology theory widely used in the study of cybercrime, this paper proposes a conceptual Engaging Stakeholders, Acceptable Behavior, Simple Teaching method, Yardstick (EASY) training model, and explains how the model can be used to design employee information security awareness and education training. Future research directions are also outlined in this paper. Culture of security; Cybercrime trends; Honeypots; Information security awareness and education training; Routine activity theory
Eco-Routing Navigation System Based on Multisource Historical and Real-Time Traffic Information

Due to increased public awareness on global climate change and other energy and environmental problems, a variety of strategies are being developed and used to reduce the energy consumption and environmental impact of roadway travel. In advanced traveler information systems, recent efforts have been made in developing a new navigation concept called “eco-routing,” which finds a route that requires the least amount of fuel and/or produces the least amount of emissions. This paper presents an eco-routing navigation system that determines the most eco-friendly route between a trip origin and a destination. It consists of the following four components: 1) a Dynamic Roadway Network database, which is a digital map of a roadway network that integrates historical and real-time traffic information from multiple data sources through an embedded data fusion algorithm; 2) an energy/emissions operational parameter set, which is a compilation of energy/emission factors for a variety of vehicle types under various roadway characteristics and traffic conditions; 3) a routing engine, which contains shortest path algorithms used for optimal route calculation; and 4) user interfaces that receive origin-destination inputs from users and display route maps to the users. Each of the system components and the system architecture are described. Example results are also presented to prove the validity of the eco-routing concept and to demonstrate the operability of the developed eco-routing navigation system. In addition, current limitations of the system and areas for future improvements are discussed.
Topic sentiment mixture: modeling facets and opinions in weblogs

In this paper, we define the problem of topic-sentiment analysis on Weblogs and propose a novel probabilistic model to capture the mixture of topics and sentiments simultaneously. The proposed Topic-Sentiment Mixture (TSM) model can reveal the latent topical facets in a Weblog collection, the subtopics in the results of an ad hoc query, and their associated sentiments. It could also provide general sentiment models that are applicable to any ad hoc topics. With a specifically designed HMM structure, the sentiment models and topic models estimated with TSM can be utilized to extract topic life cycles and sentiment dynamics. Empirical experiments on different Weblog datasets show that this approach is effective for modeling the topic facets and sentiments and extracting their dynamics from Weblog collections. The TSM model is quite general; it can be applied to any text collections with a mixture of topics and sentiments, thus has many potential applications, such as search result summarization, opinion tracking, and user behavior prediction.
Computer vision for assistive technologies

In the last decades there has been a tremendous increase in demand for Assistive Technologies (AT) useful to overcome functional limitations of individuals and to improve their quality of life. As a consequence, different research papers addressing the development of assistive technologies have appeared into the literature pushing the need to organize and categorize them taking into account the application assistive aims. Several surveys address the categorization problem for works concerning a specific need, hence giving the overview on the state of the art technologies supporting the related function for the individual. Unfortunately, this “user-need oriented” way of categorization considers each technology as a whole and then a deep and critical explanation of the technical knowledge used to build the operative tasks as well as a discussion on their cross-contextual applicability is completely missing making thus existing surveys unlikely to be technically inspiring for functional improvements and to explore new technological frontiers. To overcome this critical drawback, in this paper an original “task oriented” way to categorize the state of the art of the AT works has been introduced: it relies on the split of the final assistive goals into tasks that are then used as pointers to the works in literature in which each of them has been used as a component. In particular this paper concentrates on a set of cross-application Computer Vision tasks that are set as the pivots to establish a categorization of the AT already used to assist some of the user’s needs. For each task the paper analyzes the Computer Vision algorithms recently involved in the development of AT and, finally, it tries to catch a glimpse of the possible paths in the short and medium term that could allow a real improvement of the assistive outcomes. The potential impact on the assessment of AT considering users, medical, economical and social perspective is also addressed.
A Fully-Integrated Switched-Capacitor Step-Down DC-DC Converter With Digital Capacitance Modulation in 45 nm CMOS

Implementing efficient and cost-effective power regulation schemes for battery-powered mixed-signal SoCs is a key focus in integrated circuit design. This paper presents a fully-integrated switched-capacitor DC-DC converter in 45 nm digital CMOS technology. The proposed implementation uses digital capacitance modulation instead of traditional PFM and PWM control methods to maintain regulation against load current changes. This technique preserves constant frequency switching while also scaling switching and bottom-plate losses with changes in load current. Therefore, high efficiency can be achieved across different load current levels while maintaining a predictable switching noise behavior. The converter occupies only 0.16 mm2, and operates from 1.8 V input. It delivers a programmable sub-1 V power supply with efficiency as high as 69% and load current between 100 μA and 8 mA. Measurement results confirm the theoretical basis of the proposed design.