nils-herrmann/clean_scirepeval huggingface dataset:
Review of inverse Laplace transform algorithms for Laplace-space numerical approaches

A boundary element method (BEM) simulation is used to compare the efficiency of numerical inverse Laplace transform strategies, considering general requirements of Laplace-space numerical approaches. The two-dimensional BEM solution is used to solve the Laplace-transformed diffusion equation, producing a time-domain solution after a numerical Laplace transform inversion. Motivated by the needs of numerical methods posed in Laplace-transformed space, we compare five inverse Laplace transform algorithms and discuss implementation techniques to minimize the number of Laplace-space function evaluations. We investigate the ability to calculate a sequence of time domain values using the fewest Laplace-space model evaluations. We find Fourier-series based inversion algorithms work for common time behaviors, are the most robust with respect to free parameters, and allow for straightforward image function evaluation re-use across at least a log cycle of time.
A novel high-performance CMOS 1 bit full-adder cell

In this paper we propose a low complexity full adder design featuring higher computing speed, lower operating voltage, and lower energy consumption. it uses the low power designs of the XOR and AND gates pass transistors and transmission gates, simulation results comparing the conventional cell to the standard implementation show its superiority different circuit structures and input patterns are used for simulation. Energy saving up to 40% is achieved in addition. The performance is edge of the proposed. Design in both speed and energy consumption becomes even more significant as the world length of the adder increases. we explain how exclusive (XOR/AND) are used to realize a general full adder circuit based on pass transistor, the performance of the proposed full adder is evaluated by the comparison of the simulation result obtained from cadence. There is a higher cost in terms of the design effort for the proposed adder.
[Evolution of the concept of wind stroke of Traditional Chinese medicine (TCM)].

The wind stroke is a common syndrome in clinical disease; the physicians of past generations accumulated much experience in long-term clinical practice and left abundant literature. Looking from this literature, the physicians of past generations had different cognitions of the wind stroke, especially the concept of wind stroke. The connotation of wind stroke differed at different stages, going through a gradually changing process from exogenous disease, true wind stroke, apoplectic wind stroke to cerebral apoplexy.
Development of a Reinforcement Learning-based Evolutionary Fuzzy Rule-Based System for diabetes diagnosis

The early diagnosis of disease is critical to preventing the occurrence of severe complications. Diabetes is a serious health problem. A variety of methods have been developed for diagnosing diabetes. The majority of these methods have been developed in a black-box manner, which cannot be used to explain the inference and diagnosis procedure. Therefore, it is essential to develop methods with high accuracy and interpretability. In this study, a Reinforcement Learning-based Evolutionary Fuzzy Rule-Based System (RLEFRBS) is developed for diabetes diagnosis. The proposed model involves the building of a Rule Base (RB) and rule optimization. The initial RB is constructed using numerical data without initial rules; after learning the rules, redundant rules are eliminated based on the confidence measure. Next, redundant conditions in the antecedent parts are pruned to yield simpler rules with higher interpretability. Finally, an appropriate subset of the rules is selected using a Genetic Algorithm (GA), and the RB is constructed. Evolutionary tuning of the membership functions and weight adjusting using Reinforcement Learning (RL) are used to improve the performance of RLEFRBS. Moreover, to deal with uncovered instances, it makes use of an efficient rule stretching method. The performance of RLEFRBS was examined using two common datasets: Pima Indian Diabetes (PID) and BioSat Diabetes Dataset (BDD). The experimental results show that the proposed model provides a more compact, interpretable and accurate RB that can be considered to be a promising alternative for diagnosis of diabetes.
Retrograde amnesia.

In humans, the phenomenon of temporally graded retrograde amnesia has been described in the clinic and the laboratory for more than 100 years. In the 1990s, retrograde amnesia began to be studied prospectively in experimental animals. We identified 13 published studies in which animals were given equivalent training at two or more separate times before damage to the fornix or hippocampal formation. Eleven of these studies found temporally graded retrograde amnesia, with the extent of amnesia ranging from several days to a month or two. We consider these studies and also suggest why temporally graded retrograde amnesia has sometimes not been observed. Although the evidence in favor of temporally graded retrograde amnesia is substantial, the inference from this work, that memory is reorganized as time passes, is rather vague and depends on mechanisms yet to be identified. It is therefore encouraging that many opportunities exist for moving beyond purely descriptive studies to studies that involve treatments or manipulations directed toward yielding information about mechanisms.
Performance analysis for an enhanced architecture of IoV via Content-Centric Networking

TCP/IP protocol gradually exposes many shortcomings such as poor scalability and mobility. Content-Centric Networking is a new architecture which cares about the content itself rather than its source. Therefore, this paper proposes a novel IoV architecture which based on Content-Centric Networking and tests its transmission interference time, transmission delay, and throughout in network layer. The experimental results show that the novel architecture is superior to the current IoV in the communication performance.
THE VELOCITY CONTROL OF THE ELECTRO-HYDRAULIC SERVO SYSTEM

In general two basic methods are used for controlling the velocity of a hydraulic cylinder. First by an axial variable-displacement pump for controls flow to the cylinder. This configuration is commonly known as a hydrostatic transmission. Second by proportional valve powered by a constant-pressure source, such as a pressure compensated pump, drives the hydraulic cylinder. In this study, the electro-hydraulic servo system (EHSS) for velocity control of hydraulic cylinder is investigated experimentally and its analysis theoretically. Where the controlled hydraulic cylinder is altered by a swashplate axial piston pump or by proportional valve to achieve velocity control. The theoretical part includes the derivation of the mathematical model equations of combination system. Velocity control system for hydraulic cylinder using simple (PID) controller to get constant velocity range of hydraulic cylinder under applied external variable loads . An experimental set-up is constructed, which consists of the hydraulic test pump unit, the electro-hydraulic proportional valve unit, the hydraulic actuator unit , the external load control unit and interfacing electronic unit. The experimental results show that PID controller can be achieve good velocity control by variable displacement axial piston pump and also by proportional valve under external loads variations.
Using Unmanned Aerial Vehicles (UAV) for High-Resolution Reconstruction of Topography: The Structure from Motion Approach on Coastal Environments

The availability of high-resolution Digital Surface Models of coastal environments is of increasing interest for scientists involved in the study of the coastal system processes. Among the range of terrestrial and aerial methods available to produce such a dataset, this study tests the utility of the Structure from Motion (SfM) approach to low-altitude aerial imageries collected by Unmanned Aerial Vehicle (UAV). The SfM image-based approach was selected whilst searching for a rapid, inexpensive, and highly automated method, able to produce 3D information from unstructured aerial images. In particular, it was used to generate a dense point cloud and successively a high-resolution Digital Surface Models (DSM) of a beach dune system in Marina di Ravenna (Italy). The quality of the elevation dataset produced by the UAV-SfM was initially evaluated by comparison with point cloud generated by a Terrestrial Laser Scanning (TLS) surveys. Such a comparison served to highlight an average difference in the vertical values of 0.05 m (RMS = 0.19 m). However, although the points cloud comparison is the best approach to investigate the absolute or relative correspondence between UAV and TLS OPEN ACCESS Remote Sens. 2013, 5 6881 methods, the assessment of geomorphic features is usually based on multi-temporal surfaces analysis, where an interpolation process is required. DSMs were therefore generated from UAV and TLS points clouds and vertical absolute accuracies assessed by comparison with a Global Navigation Satellite System (GNSS) survey. The vertical comparison of UAV and TLS DSMs with respect to GNSS measurements pointed out an average distance at cm-level (RMS = 0.011 m). The successive point by point direct comparison between UAV and TLS elevations show a very small average distance, 0.015 m, with RMS = 0.220 m. Larger values are encountered in areas where sudden changes in topography are present. The UAV-based approach was demonstrated to be a straightforward one and accuracy of the vertical dataset was comparable with results obtained by TLS technology.
Design, modelling and hovering control of a tail-sitter with single thrust-vectored propeller

This paper focuses on the design, modelling and hovering control of a tail-sitter with single thrust-vectored propeller which possesses the inherent advantages of both fixed wing and rotary wing unmanned aerial vehicles (UAVs). The developed tail-sitter requires only the same number of actuators as a normal fixed wing aircraft and achieves attitude control through deflections of the thrust-vectored propeller and ailerons. Thrust vectoring is realized by mounting a simple gimbal mechanism beneath the propeller motor. Both the thrust vector model and aerodynamics model are established, which leads to a complete nonlinear model of the tail-sitter in hovering state. Quaternion is applied for attitude description to avoid the singularity problem and improve computation efficiency. Through reasonable assumptions, a simplified model of the tail-sitter is obtained, based on which a backstepping controller is designed using the Lyapunov stability theory. Experimental results are presented to demonstrate the effectiveness of the proposed control scheme.
A COBIT5 Framework for IoT Risk Management

Use of information technology management framework plays a major influence on organizational success. This article focuses on the field of Internet of Things (IoT) management. In this study, a number of risks in the field of IoT is investigated, then with review of a number of COBIT5 risk management schemes, some associated strategies, objectives and roles are provided. According to the in-depth studies of this area it is expected that using the best practices of COBIT5 can be very effective, while the use of this standard considerably improve some criteria such as performance, cost and time. Finally, the paper proposes a framework which reflects the best practices and achievements in the field of IoT risk management.
Pavlov's contributions to behavior therapy. The obvious and not so obvious.

The foundation, accomplishments, and proliferation of behavior therapy have been fueled largely by the movement's grounding in behavioral principles and theories. Ivan P. Pavlov's discovery of conditioning principles was essential to the founding of behavior therapy in the 1950s and continues to be central to modern behavior therapy. Pavlov's major legacy to behavior therapy was his discovery of "experimental neuroses", shown by his students M.N. Eroféeva and N.R. Shenger-Krestovnikova to be produced and eliminated through the principles of conditioning and counterconditioning. In this article, the Pavlovian origins of behavior therapy are assessed, and the relevance of conditioning principles to modern behavior therapy are analyzed. It is shown that Pavlovian conditioning represents far more than a systematic basic learning paradigm. It is also an essential theoretical foundation for the theory and practice of behavior therapy.
Current Insights into the Pathogenesis of Graves' Ophthalmopathy.

Environmental, genetic, and immune factors are at play in the development of the variable clinical manifestations of Graves' ophthalmopathy (GO). Among the environmental contributions, smoking is the risk factor most consistently linked to the development or worsening of the disease. The close temporal relationship between the diagnoses of Graves' hyperthyroidism and GO have long suggested that these 2 autoimmune conditions may share pathophysiologic features. The finding that the thyrotropin receptor (TSHR) is expressed in orbital fibroblasts, the target cells in GO, supported the notion of a common autoantigen. Both cellular and humeral immunity directed against TSHR expressed on orbital fibroblasts likely initiate the disease process. Activation of helper T cells recognizing TSHR peptides and ligation of TSHR by TRAb lead to the secretion of inflammatory cytokines and chemokines, and enhanced hyaluronic acid (HA) production and adipogenesis. The resulting connective tissue remodeling results in varying degrees extraocular muscle enlargement and orbital fat expansion. A subset of orbital fibroblasts express CD34, are bone-marrow derived, and circulate as fibrocytes that infiltrate connective tissues at sites of injury or inflammation. As these express high levels of TSHR and are capable of producing copious cytokines and chemokines, they may represent an orbital fibroblast population that plays a central role in GO development. In addition to TSHR, orbital fibroblasts from patients with GO express high levels of IGF-1R. Recent studies suggest that these receptors engage in cross-talk induced by TSHR ligation to synergistically enhance TSHR signaling, HA production, and the secretion of inflammatory mediators.
Operating an unknown drawer using an aerial manipulator

This paper is about opening and closing an unknown drawer using an aerial manipulator. To accommodate practical applications, it is assumed that the direction of motion and mechanical properties of the drawer are not given beforehand. A multirotor combined with a robotic arm is used for the manipulation task. Typical drawers are allowed to move in only one direction, which constrains the motion of the aerial manipulator while operating a drawer. To analyze this interaction, the dynamic characteristics of the aerial manipulator are modeled. Also, configuration of the aerial manipulator for exerting the desired force to a drawer is presented. To handle the uncertainties associated with the mechanism of a drawer, strategies exploiting velocity of the end effector are employed. The proposed approach is validated with experiments including opening and closing a common drawer, which is detected by a camera mounted in the palm of the end effector.
Led-based optical cochlear implant on highly flexible triple layer polyimide substrates

This paper reports on the design, fabrication, assembly, as well as the optical, mechanical and thermal characterization of a novel MEMS-based optical cochlear implant (OCI). Building on advances in optogenetics, it will enable the optical stimulation of neural activity in the auditory pathway at 10 independently controlled spots. The optical stimulation of the spiral ganglion neurons (SGNs) promises a pronounced increase in the number of discernible acoustic frequency channels in comparison with commercial cochlear implants based on the electrical stimulation. Ten high-efficiency light-emitting diodes are integrated as a linear array onto an only 12-μm-thick highly flexible polyimide substrate with three metal and three polyimide layers. The high mechanical flexibility of this novel OCI enables its insertion into a 300 μm wide channel with an outer bending radius of 1 mm. The 2 cm long and only 240 μm wide OCI is electrically passivated with a thin layer of Cy-top™.
Word, graph and manifold embedding from Markov processes

Continuous vector representations of words and objects appear to carry surprisingly rich semantic content. In this paper, we advance both the conceptual and theoretical understanding of word embeddings in three ways. First, we ground embeddings in semantic spaces studied in cognitivepsychometric literature and introduce new evaluation tasks. Second, in contrast to prior work, we take metric recovery as the key object of study, unify existing algorithms as consistent metric recovery methods based on co-occurrence counts from simple Markov random walks, and propose a new recovery algorithm. Third, we generalize metric recovery to graphs and manifolds, relating co-occurence counts on random walks in graphs and random processes on manifolds to the underlying metric to be recovered, thereby reconciling manifold estimation and embedding algorithms. We compare embedding algorithms across a range of tasks, from nonlinear dimensionality reduction to three semantic language tasks, including analogies, sequence completion, and classification.
Location privacy preservation in collaborative spectrum sensing

Collaborative spectrum sensing has been regarded as a promising approach to enable secondary users to detect primary users by exploiting spatial diversity. In this paper, we consider a converse question: could space diversity be exploited by a malicious entity, e.g., an external attacker or an untrusted Fusion Center (FC), to achieve involuntary geolocation of a secondary user by linking his location-dependent sensing report to his physical position. We answer this question by identifying a new security threat in collaborative sensing from testbed implementation, and it is shown that the attackers could geo-locate a secondary user from its sensing report with a successful rate of above 90% even in the presence of data aggregation. We then introduce a novel location privacy definition to quantify the location privacy leaking in collaborative sensing. We propose a Privacy Preserving collaborative Spectrum Sensing (PPSS) scheme, which includes two primitive protocols: Privacy Preserving Sensing Report Aggregation protocol (PPSRA) and Distributed Dummy Report Injection Protocol (DDRI). Specifically, PPSRA scheme utilizes applied cryptographic techniques to allow the FC to obtain the aggregated result from various secondary users without learning each individual's values while DDRI algorithm can provide differential location privacy for secondary users by introducing a novel sensing data randomization technique. We implement and evaluate the PPSS scheme in a real-world testbed. The evaluation results show that PPSS can significantly improve the secondary user's location privacy with a reasonable security overhead in collaborative sensing.
Knowledge-Based Data Mining Using Semantic Web

Semantic web offers a smarter web service which synchronizes and arranges all the data over web in a disciplined manner. In data mining over web, the accuracy of selecting necessary data according to user demand and pick them for output is considered as a major challenging task over the years. This paper proposes an approach to mapping data over the web 3.0 through ontology and access the required data via an intelligent agent. The agent provides all the searched data related to user query from which user can find desired information. When the user does not have sufficient search parameter, knowledge can be perceived from the information provided by the agent. The derivation of such unknown knowledge from the existing can be achieved by semantic web mining. We present an intelligent agent-based web mining model where users’ query is being searched by following existing traditional way, e.g. by Google. The intelligent agent checks the searched data and derives only those are the semantically related to users search parameter. A work-in-progress case study of University Faculty Information presented to examine the effectiveness of the proposed model.  Selection and peer review under responsibility of Information Engineering Research Institute
DeepBound: accurate identification of transcript boundaries via deep convolutional neural fields

Reconstructing the full-length expressed transcripts ( a.k.a. the transcript assembly problem) from the short sequencing reads produced by RNA-seq protocol plays a central role in identifying novel genes and transcripts as well as in studying gene expressions and gene functions. A crucial step in transcript assembly is to accurately determine the splicing junctions and boundaries of the expressed transcripts from the reads alignment. In contrast to the splicing junctions that can be efficiently detected from spliced reads, the problem of identifying boundaries remains open and challenging, due to the fact that the signal related to boundaries is noisy and weak.



We present DeepBound, an effective approach to identify boundaries of expressed transcripts from RNA-seq reads alignment. In its core DeepBound employs deep convolutional neural fields to learn the hidden distributions and patterns of boundaries. To accurately model the transition probabilities and to solve the label-imbalance problem, we novelly incorporate the AUC (area under the curve) score into the optimizing objective function. To address the issue that deep probabilistic graphical models requires large number of labeled training samples, we propose to use simulated RNA-seq datasets to train our model. Through extensive experimental studies on both simulation datasets of two species and biological datasets, we show that DeepBound consistently and significantly outperforms the two existing methods.


Availability and implementation
DeepBound is freely available at https://github.com/realbigws/DeepBound .



mingfu.shao@cs.cmu.edu or realbigws@gmail.com.
Chapter . IX Emergence . in . Agent-Based . Computational . Social . Science : Conceptual , . Formal , . and . Diagrammatic . Analysis

This chapter provides a critical survey of emergence definitions both from a conceptual and formal standpoint. The notions of downward / backward causation and weak / strong emergence are specially discussed, for application to complex social system with cognitive agents. Particular attention is devoted to the formal definitions introduced by (Müller 2004) and (Bonabeau & Dessalles, 1997), which are operative in multi-agent frameworks and make sense from both cognitive and social point of view. A diagrammatic 4-Quadrant approach, allow us to understanding of complex phenomena along both interior/exterior and individual/collective dimension.
What is wrong with the Budeanu concept of reactive and distortion power and why it should be abandoned

The Budeanu definitions of reactive and distortion power in circuits with nonsinusoidal waveforms have been widely used for almost 60 years. There have been objections, concerned mainly with the questions of whether these powers should be defined in the frequency domain and whether they can be measured as defined. The main drawbacks of these definitions include the fact that the Budeanu reactive and distortion powers do not possess any attributes which might be related to the power phenomena in the circuit; that their values do not provide any information which would allow the design of compensating circuits; and that the distortion power value does not provide any information about waveform distortion. It is concluded that Budeanu's concept has led the power theory of circuits with nonsinusoidal waveforms into a blind alley.