Mining interesting knowledge using DM-II
Data mining aims to develop a new generation of tools to intelligently assist humans in analyzing mountains of data. Over the past few years, great progress has been made in both research and applications of data mining. Data mining systems have helped many businesses by exposing previously unknown patterns in their databases, which were used to improve profits, enhance customer services, and ultimately achieve a competitive advantage. In this paper, we present our unique data mining system DM-II (Data Mining Integration and Interestingness). DM-II is a PC-based system working in Windows 95/98/NT environment. Apart from the normal components of a data mining system, DM-II has a number of unique and advanced sub-systems. These sub-systems have been applied in many real-life applications, including education applications, insurance application, accident application, disease application, drug screening application, image classification, etc. Here, we focus on discussing the following sub-systems: CBA: CBA originally stands for Classification-Based on Associations [lo]. It has now been extended with a number of other advanced features. In all, CBA has the following capabilities: Building classifiers using association rules: Traditionally, association rule mining and classifier building are regarded as two different data mining tasks. CBA unifies the two tasks. It is able to ,generate association rules and builds a classifier using a special subset of the association rules. What is significant is that CBA, in general, produces more accurate classifiers compared to the state-ofthe-art classification system C4.5 [ 161. It also helps to solve some outstanding problems with the existing classification systems. Pruning and summarizing the discovered associations: One major problem with association

title: Finding Actionable Knowledge via Automated Comparison
abstract: The problem of finding interesting and actionable patterns is a major challenge in data mining. It has been studied by many data mining researchers. The issue is that data mining algorithms often generate too many patterns, which make it very hard for the user to find those truly useful ones. Over the years many techniques have been proposed. However, few have made it to real-life applications. At the end of 2005, we built a data mining system for Motorola (called Opportunity Map) to enable the user to explore the space of a large number of rules in order to find actionable knowledge. The approach is based on the concept of rule cubes and operations on rule cubes. A rule cube is similar to a data cube, but stores rules. Since its deployment, some issues have also been identified during the regular use of the system in Motorola. One of the key issues is that although the operations on rule cubes are flexible, each operation is primitive and has to be initiated by the user. Finding a piece of actionable knowledge typically involves many operations and intense visual inspections, which are labor-intensive and time-consuming. From interactions with our users, we identified a generic problem that is crucial for finding actionable knowledge. The problem involves extensive comparison of sub-populations and identification of the cause of their differences. This paper first defines the problem and then proposes an effective method to solve the problem automatically. To the best of our knowledge, there is no reported study of this problem. The new method has been added to the Opportunity Map system and is now in daily use in Motorola.

title: Opinion Mining
abstract: Описанл процедуру формування інтегрального показника об’єкта згідно з відгуками користувачів під час застосування методів оцінювання опінії текстової інформації у web-документах. Запропоновано використання лінгвістичних змінних та застосування вагових коефіцієнтів для достовірнішого результату оцінювання емоційного забарвлення текстової інформації. Ключові слова: опінія, емоційне забарвлення, об’єкт, інтегральний показник, лінгвістична змінна, ваговий коефіцієнт.

title: Dealing with different distributions in learning from
abstract: In the problem of learning with positive and unlabeled examples, existing research all assumes that positive examples P and the hidden positive examples in the unlabeled set U are generated from the same distribution. This assumption may be violated in practice. In such cases, existing methods perform poorly. This paper proposes a novel technique A-EM to deal with the problem. Experimental results with product page classification demonstrate the effectiveness of the proposed technique.

title: Entity discovery and assignment for opinion mining applications
abstract: Opinion mining became an important topic of study in recent years due to its wide range of applications. There are also many companies offering opinion mining services. One problem that has not been studied so far is the assignment of entities that have been talked about in each sentence. Let us use forum discussions about products as an example to make the problem concrete. In a typical discussion post, the author may give opinions on multiple products and also compare them. The issue is how to detect what products have been talked about in each sentence. If the sentence contains the product names, they need to be identified. We call this problem entity discovery. If the product names are not explicitly mentioned in the sentence but are implied due to the use of pronouns and language conventions, we need to infer the products. We call this problem entity assignment. These problems are important because without knowing what products each sentence talks about the opinion mined from the sentence is of little use. In this paper, we study these problems and propose two effective methods to solve the problems. Entity discovery is based on pattern discovery and entity assignment is based on mining of comparative sentences. Experimental results using a large number of forum posts demonstrate the effectiveness of the technique. Our system has also been successfully tested in a commercial setting.

title: Speed-up iterative frequent itemset mining with constraint changes
abstract: Mining of frequent itemsets is a fundamental data mining task. Past research has proposed many efficient algorithms for this purpose. Recent work also highlighted the importance of using constraints to focus the mining process to mine only those relevant itemsets. In practice, data mining is often an interactive and iterative process. The user typically changes constraints and runs the mining algorithm many times before being satisfied with the final results. This interactive process is very time consuming. Existing mining algorithms are unable to take advantage of this iterative process to use previous mining results to speed up the current mining process. This results in an enormous waste of time and computation. In this paper, we propose an efficient technique to utilize previous mining results to improve the efficiency of current mining when constraints are changed. We first introduce the concept of tree boundary to summarize useful information available from previous mining. We then show that the tree boundary provides an effective and efficient framework for the new mining. The proposed technique has been implemented in the context of two existing frequent itemset mining algorithms, FP-tree and tree projection. Experiment results on both synthetic and real-life datasets show that the proposed approach achieves a dramatic saving of computation.

title: A combinational feature selection and ensemble neural network method for classification of gene expression data
abstract: BackgroundMicroarray experiments are becoming a powerful tool for clinical diagnosis, as they have the potential to discover gene expression patterns that are characteristic for a particular disease. To date, this problem has received most attention in the context of cancer research, especially in tumor classification. Various feature selection methods and classifier design strategies also have been generally used and compared. However, most published articles on tumor classification have applied a certain technique to a certain dataset, and recently several researchers compared these techniques based on several public datasets. But, it has been verified that differently selected features reflect different aspects of the dataset and some selected features can obtain better solutions on some certain problems. At the same time, faced with a large amount of microarray data with little knowledge, it is difficult to find the intrinsic characteristics using traditional methods. In this paper, we attempt to introduce a combinational feature selection method in conjunction with ensemble neural networks to generally improve the accuracy and robustness of sample classification.ResultsWe validate our new method on several recent publicly available datasets both with predictive accuracy of testing samples and through cross validation. Compared with the best performance of other current methods, remarkably improved results can be obtained using our new strategy on a wide range of different datasets.ConclusionsThus, we conclude that our methods can obtain more information in microarray data to get more accurate classification and also can help to extract the latent marker genes of the diseases for better diagnosis and treatment.

title: ARDB—Antibiotic Resistance Genes Database
abstract: The treatment of infections is increasingly compromised by the ability of bacteria to develop resistance to antibiotics through mutations or through the acquisition of resistance genes. Antibiotic resistance genes also have the potential to be used for bio-terror purposes through genetically modified organisms. In order to facilitate the identification and characterization of these genes, we have created a manually curated database—the Antibiotic Resistance Genes Database (ARDB)—unifying most of the publicly available information on antibiotic resistance. Each gene and resistance type is annotated with rich information, including resistance profile, mechanism of action, ontology, COG and CDD annotations, as well as external links to sequence and protein databases. Our database also supports sequence similarity searches and implements an initial version of a tool for characterizing common mutations that confer antibiotic resistance. The information we provide can be used as compendium of antibiotic resistance factors as well as to identify the resistance genes of newly sequenced genes, genomes, or metagenomes. Currently, ARDB contains resistance information for 13 293 genes, 377 types, 257 antibiotics, 632 genomes, 933 species and 124 genera. ARDB is available at http://ardb.cbcb.umd.edu/.

title: An effective parameter extraction method based on memetic differential evolution algorithm
abstract: This paper provides an effective method for parameter extraction of microelectronic devices and elements. A novel method, memetic differential evolution (MDE) algorithm, is proposed in this paper. By combining differential evolution (DE) algorithm, mutations in immune algorithm (IA), and special operators for parameter extraction, MDE possesses characteristics of high accuracy, stability, generality, and efficiency. The effectiveness of the method has been shown by two typical examples, including small-signal equivalent circuit models for an AlGaN/GaN HEMT device up to 40GHz, as well as an equivalent circuit model for on-chip differential spiral inductors. In both cases, the initial values and parameter ranges of the elements in the equivalent circuits are hard to determine in optimization. The results and comparisons with Levenberg-Marquardt (LM) algorithm, genetic algorithm (GA), particle swarm optimization (PSO) algorithm and canonical DE algorithm, demonstrate the superiority of MDE in terms of accuracy and generality.

title: Nesting Algorithm for Multi-Classification Problems
abstract: Support vector machines (SVMs) are originally designed for binary classifications. As for multi-classifications, they are usually converted into binary ones. In the conventional multi-classifiable algorithms, One-against-One algorithm is a very power method. However, there exists a middle unclassifiable region. In order to overcome this drawback, a novel method called Nesting Algorithm is presented in this paper. Our ideas are as follows: firstly, construct the optimal hyperplanes based on One-against-One approach. Secondly, if there exist data points in the middle unclassifiable region, select them to construct the optimal hyperplanes with the same hyperparameters. Thirdly, repeat the second step until there are no data points in the unclassifiable region or the region is disappeared. In this paper, we also prove the validity of the proposed algorithm for unclassifiable region and give the computational complexity analysis of the method. In order to examine the training accuracy and the generalization performance of the proposed algorithm, One-against-One algorithm, fuzzy least square support vector machine (FLS-SVM) and the proposed algorithm are applied to five UCI datasets. The results show that the training accuracy of the proposed algorithm is higher than the others, and its generalization performance is also comparable with them.

title: A High-Performance Intelligent Integrated Data Services System in Data Grid
abstract: It is very complex and of low efficiency for grid users to access heterogeneous diverse data resources distributed over the whole wide area network. The integrated data services can implement more wide range of transparent access to data resources in Data Grid. One of the important building blocks for any Data Grid is the server which implements data services. In this paper, we describe HPIIDS which implements integrated data services and achieves more wide range of transparencies. In order to improve its performances, we emphasis on the server called DSB which provides integrated data services. The DSB bases on cluster and agent technologies. Agent-based DSB can cleverly prefetch required data, replicate them among DSBs. Multiple DSBs are formed cluster HPIIDS. Cluster-based HPIIDS implements a single entry, provides a virtual integrated storage system for users, hides distributed heterogeneous low-level data resources, and insures load balance of each server. HPIIDS architecture supporting these various scenarios, are also described.