FIRM: fuzzily integrated region matching for content-based image retrieval
We propose FIRM (Fuzzily Integrated Region Matching), an efficient and robust similarity measure for region-based image retrieval. Each image in our retrieval system is represented by a set of regions that are characterized by fuzzy sets. The FIRM measure, representing the overall similarity between two images, is defined as the similarity between two families of fuzzy sets. Compared with similarity measures based on individual regions and on all regions with crisp feature representations, our approach greatly reduces the influence of inaccurate segmentation. Experimental results based on a database of about 200,000 general-purpose images demonstrate improved accuracy, robustness, and high speed.

title: On Zador's entropy-constrained quantization theorem
abstract: Zador's classic result for the asymptotic high-rate behavior of entropy-constrained vector quantization is recast in a Lagrangian form which better matches the Lloyd algorithm used to optimize such quantizers. A proof that the result holds for a general class of distributions is sketched.

title: Asymptotic Performance of Vector Quantizers with a Perceptual Distortion Measure
abstract: Gersho's (1979) bounds on the asymptotic performance of vector quantizers are valid for vector distortions which are powers of the Euclidean norm. Yamada, Tazaki, and Gray (1980) generalized the results to distortion measures that are increasing functions of the norm of their argument. In both cases, the distortion is uniquely determined by the vector quantization error, i.e., the Euclidean difference between the original vector and the codeword into which it is quantized. We generalize these asymptotic bounds to input-weighted quadratic distortion measures and measures that are approximately output-weighted-quadratic when the distortion is small, a class of distortion measures often claimed to be perceptually meaningful. An approximation of the asymptotic distortion based on Gersho's conjecture is derived as well. We also consider the problem of source mismatch, where the quantizer is designed using a probability density different from the true source density. The resulting asymptotic performance in terms of distortion increase in decibels is shown to be linear in the relative entropy between the true and estimated probability densities.

title: Unsupervised Multiresolution Segmentation for Images with Low Depth of Field
abstract: Unsupervised segmentation of images with low depth of field (DOF) is highly useful in various applications. This paper describes a novel multiresolution image segmentation algorithm for low DOF images. The algorithm is designed to separate a sharply focused object-of-interest from other foreground or background objects. The algorithm is fully automatic in that all parameters are image independent. A multi-scale approach based on high frequency wavelet coefficients and their statistics is used to perform context-dependent classification of individual blocks of the image. Unlike other edge-based approaches, our algorithm does not rely on the process of connecting object boundaries. The algorithm has achieved high accuracy when tested on more than 100 low DOF images, many with inhomogeneous foreground or background distractions. Compared with he state of the art algorithms, this new algorithm provides better accuracy at higher speed.

title: Real-Time Computerized Annotation of Pictures
abstract: Developing effective methods for automated annotation of digital pictures continues to challenge computer scientists. The capability of annotating pictures by computers can lead to breakthroughs in a wide range of applications, including Web image search, online picture-sharing communities, and scientific experiments. In this work, the authors developed new optimization and estimation techniques to address two fundamental problems in machine learning. These new techniques serve as the basis for the automatic linguistic indexing of pictures - real time (ALIPR) system of fully automatic and high-speed annotation for online pictures. In particular, the D2-clustering method, in the same spirit as K-Means for vectors, is developed to group objects represented by bags of weighted vectors. Moreover, a generalized mixture modeling technique (kernel smoothing as a special case) for nonvector data is developed using the novel concept of hypothetical local mapping (HLM). ALIPR has been tested by thousands of pictures from an Internet photo-sharing site, unrelated to the source of those pictures used in the training process. Its performance has also been studied at an online demonstration site, where arbitrary users provide pictures of their choices and indicate the correctness of each annotation word. The experimental results show that a single computer processor can suggest annotation terms in real time and with good accuracy.

title: A source coding approach to classification by vector quantization and the principle of minimum description length
abstract: An algorithm for supervised classification using vector quantization and entropy coding is presented. The classification rule is formed from a set of training data {(X/sub i/, Y/sub i/)}/sub i=1//sup n/, which are independent samples from a joint distribution P/sub XY/. Based on the principle of minimum description length (MDL), a statistical model that approximates the distribution P/sub XY/ ought to enable efficient coding of X and Y. On the other hand, we expect a system that encodes (X, Y) efficiently to provide ample information on the distribution P/sub XY/. This information can then be used to classify X, i.e., to predict the corresponding Y based on X. To encode both X and Y, a two-stage vector quantizer is applied to X and a Huffman code is formed for Y conditioned on each quantized value of X. The optimization of the encoder is equivalent to the design of a vector quantizer with an objective function reflecting the joint penalty of quantization error and misclassification rate. This vector quantizer provides an estimation of the conditional distribution of Y given X, which in turn yields an approximation to the Bayes classification rule. This algorithm, namely discriminant vector quantization (DVQ), is compared with learning vector quantization (LVQ) and CART/sup R/ on a number of data sets. DVQ outperforms the other two on several data sets. The relation between DVQ, density estimation, and regression is also discussed.

title: Introducing a Rule Importance Measure
abstract: Association rule algorithms often generate an excessive number of rules, many of which are not significant. It is difficult to determine which rules are more useful, interesting and important. We introduce a rough set based Rule Importance Measure to select the most important rules. We use ROSETTA software to generate multiple reducts. Apriori association rule algorithm is then applied to generate rule sets for each data set based on each reduct. Some rules are generated more frequently than the others among the total rule sets. We consider such rules as more important. We define rule importance as the frequency of an association rule generated across all the rule sets. Rule importance is different from either rule interestingness measures or rule quality measures because of their application tasks, the processes where the measures are applied and the contents they measure. The experimental results from an artificial data set, UCI machine learning datasets and an actual geriatric care medical data set show that our method reduces the computational cost for rule generation and provides an effective measure of how important is a rule.

title: Bioinformatics Web Services
abstract: Web services is distributed computing technology that provides software services over the Web. The Cyberinfrastructure Group at the Virginia Bioinformatics Institute (VBI) has adopted the Web service architecture and wrapped a wide variety of bioinformatics applications and data resources using the technology. Users can browse various data resources and invoke analysis tools through the services deployed at VBI. We have also developed an integrated client environment, ToolBus, which is available from http://pathport.vbi.vt.edu/download. A use case is given to demonstrate the use of Web services through ToolBus. A complete list of Web services is included.

title: Genescene: biomedical text and data mining
abstract: To access the content of digital texts efficiently, it is necessary to provide more sophisticated access than keyword based searching. Genescene provides biomedical researchers with research findings and background relations automatically extracted from text and experimental data. These provide a more detailed overview of the information available. The extracted relations were evaluated by qualified researchers and are precise. A qualitative ongoing evaluation of the current online interface indicates that this method to search the literature is more useful and efficient than keyword based searching.

title: Mining risk patterns in medical data
abstract: In this paper, we discuss a problem of finding risk patterns in medical data. We define risk patterns by a statistical metric, relative risk, which has been widely used in epidemiological research. We characterise the problem of mining risk patterns as an optimal rule discovery problem. We study an anti-monotone property for mining optimal risk pattern sets and present an algorithm to make use of the property in risk pattern discovery. The method has been applied to a real world data set to find patterns associated with an allergic event for ACE inhibitors. The algorithm has generated some useful results for medical researchers.

title: A Rough Set Based Model to Rank the Importance of Association Rules
abstract: Association rule algorithms often generate an excessive number of rules, many of which are not significant. It is difficult to determine which rules are more useful, interesting and important. We introduce a rough set based process by which a rule importance measure is calculated for association rules to select the most appropriate rules. We use ROSETTA software to generate multiple reducts. Apriori association rule algorithm is then applied to generate rule sets for each data set based on each reduct. Some rules are generated more frequently than the others among the total rule sets. We consider such rules as more important. We define rule importance as the frequency of an association rule among the rule sets. Rule importance is different from rule interestingness in that it does not consider the predefined knowledge on what kind of information is considered to be interesting. The experimental results show our method reduces the number of rules generated and at the same time provides a measure of how important is a rule.