Landmark matching via large deformation diffeomorphisms
This paper describes the generation of large deformation diffeomorphisms phi:Omega=[0,1]3<-->Omega for landmark matching generated as solutions to the transport equation dphi(x,t)/dt=nu(phi(x,t),t),epsilon[0,1] and phi(x,0)=x, with the image map defined as phi(.,1) and therefore controlled via the velocity field nu(.,t),epsilon[0,1]. Imagery are assumed characterized via sets of landmarks {xn, yn, n=1, 2, ..., N}. The optimal diffeomorphic match is constructed to minimize a running smoothness cost parallelLnu parallel2 associated with a linear differential operator L on the velocity field generating the diffeomorphism while simultaneously minimizing the matching end point condition of the landmarks. Both inexact and exact landmark matching is studied here. Given noisy landmarks xn matched to yn measured with error covariances Sigman, then the matching problem is solved generating the optimal diffeomorphism phi;(x,1)=integral0(1)nu(phi(x,t),t)dt+x where nu(.)=argmin(nu.)integral1(0) integralOmega parallelLnu(x,t) parallel2dxdt +Sigman=1N[yn-phi(xn,1)] TSigman(-1)[yn-phi(xn,1)]. Conditions for the existence of solutions in the space of diffeomorphisms are established, with a gradient algorithm provided for generating the optimal flow solving the minimum problem. Results on matching two-dimensional (2-D) and three-dimensional (3-D) imagery are presented in the macaque monkey.

title: Large deformation diffeomorphic metric mapping of fiber orientations
abstract: This paper proposes a method to match diffusion tensor magnetic resonance images (DT-MRI) through the large deformation diffeomorphic metric mapping of vector fields, focusing on the fiber orientations, considered as unit vector fields on the image volume. We study a suitable action of diffeomorphisms on such vector fields, and provide an extension of the large deformation diffeomorphic metric-mapping framework to this type of dataset, resulting in optimizing for geodesies on the space of diffeomorphisms connecting two images. Two different distance function of vector fields are considered. Existence of the minimizers under smoothness assumptions on the compared vector fields is proved, and coarse to fine hierarchical strategies are detailed, to reduce both ambiguities and computation load. This is illustrated by numerical experiments on DT-MRI heart and brain images

title: Information measures for object recognition accommodating signature variability
abstract: This paper presents measures characterizing the information content of remote observations of ground scenes imaged via optical and infrared sensors. Object recognition is posed in the context of deformable templates; the special Euclidean group is used to accommodate geometric variation of object pose. Principal component analysis of object signatures is used to represent and efficiently accommodate variation in object signature due to changes in the thermal state of the object surface. Mutual information measures, which are independent of the recognition system, are calculated quantifying both the information gain due to remote observations of the scene and the information loss due to signature variability. Signature model mismatch is quantitatively examined using the Kullback-Leibler divergence. Expressions are derived quadratically approximating the posterior conditional entropy on the orthogonal group for high signal-to-noise ratio. It is demonstrated that quadratic modules accurately characterize the posterior entropy for broad ranges of signal-to-mise ratio. Information gain in multiple-sensor scenarios is quantified, and it is demonstrated that the cost of signature uncertainty for the Comanche series of FLIR images collected by the US Army Night Vision Electronic Sensors Directorate is approximately 0.8 bits with an associated near doubling of mean-squared error uncertainty in pose.

title: Segmenting magnetic resonance images via hierarchical mixture modelling
abstract: We present a statistically innovative as well as scientifically and practically relevant method for automatically segmenting magnetic resonance images using hierarchical mixture models. Our method is a general tool for automated cortical analysis which promises to contribute substantially to the science of neuropsychiatry. We demonstrate that our method has advantages over competing approaches on a magnetic resonance brain imagery segmentation task.

title: Bayesian Segmentation via Asymptotic Partition Functions
abstract: Asymptotic approximations to the partition function of Gaussian random fields are derived. Textures are characterized via Gaussian random fields induced by stochastic difference equations determined by finitely supported, stationary, linear difference operators, adjusted to be nonstationary at the boundaries. It is shown that as the scale of the underlying shape increases, the log-normalizer converges to the integral of the log-spectrum of the operator inducing the random field. Fitting the covariance of the fields amounts to fitting the parameters of the spectrum of the differential operator-induced random field model. Matrix analysis techniques are proposed for handling textures with variable orientation. Examples of texture parameters estimated from training data via asymptotic maximum-likelihood are shown. Isotropic models involving powers of the Laplacian and directional models involving partial derivative mixtures are explored. Parameters are estimated for mitochondria and actin-myocin complexes in electron micrographs and clutter in forward-looking infrared images. Deformable template models are used to infer the shape of mitochondria in electron micrographs, with the asymptotic approximation allowing easy recomputation of the partition function as inference proceeds.

title: Individualizing Anatomical Atlases of the Head
abstract: This paper presents diffeomorphic transformations of 3D anatomical image data in human brains as imaged via magnetic resonance imagery. These transformations are generated in a hierarchical manner accommodating both global and local anatomical detail. The initial low-dimensional registration is accomplished by constraining the transformation to be in a low-dimensional basis. The basis is defined by the Green's function of the elasticity operator placed at predefined locations in the anatomy and the eigenfunctions of the elasticity operator. The high-dimensional, large-deformation registration is accomplished by minimizing the mismatch between the template (atlas) and target image volumes constrained by solving the Navier Stokes fluid model on a vector field.

title: Generalized Domination in Chordal Graphs
abstract: We discuss the computational complexity of generalized domination problems, which were introduced in  Complexity of domination-type problems in graphs, Nordic Journal of Computing 1 (1994), 157-171], restricted to chordal and interval graphs. The existence problem, parametrized by two sets of nonnegative integers σ and ρ, asks for the existence of a set S of vertices of a given graph such that for every vertex u ∈ S (or u ∉ S), the number of neighbors of u which are in S is in σ (in ρ, respectively). Telle proved that this problem is NP-complete for general graphs, provided both σ and ρ are finite and 0 ∉ ρ. One of our main results shows that in such cases, the existence problem is polynomially solvable for interval graphs. On the other hand, for chordal graphs, the complexity of the existence problem varies significantly even when σ and ρ contain one element each.

title: A Note on Large Graphs of Diameter Two and Given Maximum Degree,
abstract: Letvt(d,2) be the largest order of a vertex-transitive graph of degreedand diameter 2. It is known thatvt(d,2)=d2+1 ford=1,2,3, and 7; for the remaining values ofdwe havevt(d,2)?d2?1. The only knowngenerallower bound onvt(d,2), valid forall d, seems to bevt(d,2)??(d+2)/2? ?(d+2)/2?. Using voltage graphs, we construct a family of vertex-transitive non-Cayley graphs which shows thatvt(d,2)?(8/9)(d+12)2for alldof the formd=(3q?1)/2, whereqis a prime power congruent with 1 (mod 4). The construction generalizes to all prime powers and yields large highly symmetric graphs for other degrees as well. In particular, ford=7 we obtain as a special case the Hoffman?Singleton graph, and ford=11 andd=13 we have new largest graphs of diameter 2, and degreedon 98 and 162 vertices, respectively.

title: Group Actions, Homeomorphisms, and Matching: A General Framework
abstract: This paper constructs metrics on the space of images I defined as orbits under group actions G. The groups studied include the finite dimensional matrix groups and their products, as well as the infinite dimensional diffeomorphisms examined in Trouvé (1999, Quaterly of Applied Math.) and Dupuis et al. (1998). Quaterly of Applied Math. Left-invariant metrics are defined on the product G × I thus allowing the generation of transformations of the background geometry as well as the image values. Examples of the application of such metrics are presented for rigid object matching with and without signature variation, curves and volume matching, and structural generation in which image values are changed supporting notions such as tissue creation in carrying one image to another.

title: Training Teams with Collaborative Agents
abstract: Training teams is an activity that is expensive, time-consuming, hazardous in some cases, and can be limited by availability of equipment and personnel. In team training, the focus is on optimizing interactions, such as efficiency of communication, conflict resolution and prioritization, group situation awareness, resource distribution and load balancing, etc. This paper presents an agent-based approach to designing intelligent team training systems. We envision a computer-based training system in which teams are trained by putting them through scenarios, which allow them to practice their team skills. There are two important roles that intelligent agents can play; these are as virtual team members and as coach. To carry out these functions, these agents must be equipped with an understanding of the task domain, the team structure, the selected decision-making process and their belief about other team members' mental states.

title: Objects in Concurrent Logic Programming Languages
abstract: Concurrent Prolog supports object-oriented programming with a clean semantics and additional programming constructs such as incomplete messages, unification, direct broadcasting, and concurrency synchronization [Shapiro 1983a]. While it provides excellent computational support, we claim it does not provide good notation for expressing the abstractions of object-oriented programming. We describe a preprocessor that remedies this problem. The resulting language, Vulcan, is then used as a behicle for exploring new variants of object-oriented programming which become possible in this framework.