nils-herrmann/clean_scirepeval huggingface dataset:
Neural Regression, Representational Similarity, Model Zoology & Neural Taskonomy at Scale in Rodent Visual Cortex
Authors: Colin Conwell, David Mayo, Andrei Barbu, Michael A Buice, George A. Alvarez, Boris Katz

How well do deep neural networks fare as models of mouse visual cortex? A majority of research to date suggests results far more mixed than those produced in the modeling of primate visual cortex. Here, we perform a large-scale benchmarking of dozens of deep neural network models in mouse visual cortex with both representational similarity analysis and neural regression. Using the Allen Brain Observatory's 2-photon calcium-imaging dataset of activity in over 6,000 reliable rodent visual cortical neurons recorded in response to natural scenes, we replicate previous findings and resolve previous discrepancies, ultimately demonstrating that modern neural networks can in fact be used to explain activity in the mouse visual cortex to a more reasonable degree than previously suggested. Using our benchmark as an atlas, we offer preliminary answers to overarching questions about levels of analysis (e.g. do models that better predict the representations of individual neurons also predict representational similarity across neural populations?); questions about the properties of models that best predict the visual system overall (e.g. is convolution or category-supervision necessary to better predict neural activity?); and questions about the mapping between biological and artificial representations (e.g. does the information processing hierarchy in deep nets match the anatomical hierarchy of mouse visual cortex?). Along the way, we catalogue a number of models (including vision transformers, MLP-Mixers, normalization free networks, Taskonomy encoders and self-supervised models) outside the traditional circuit of convolutional object recognition. Taken together, our results provide a reference point for future ventures in the deep neural network modeling of mouse visual cortex, hinting at novel combinations of mapping method, architecture, and task to more fully characterize the computational motifs of visual representation in a species so central to neuroscience, but with a perceptual physiology and ecology markedly different from the ones we study in primates.
Second-Order Neural ODE Optimizer
Authors: Guan-Horng Liu, Tianrong Chen, Evangelos Theodorou

We propose a novel second-order optimization framework for training the emerging deep continuous-time models, specifically the Neural Ordinary Differential Equations (Neural ODEs). Since their training already involves expensive gradient computation by solving a backward ODE, deriving efficient second-order methods becomes highly nontrivial. Nevertheless, inspired by the recent Optimal Control (OC) interpretation of training deep networks, we show that a specific continuous-time OC methodology, called Differential Programming, can be adopted to derive backward ODEs for higher-order derivatives at the same O(1) memory cost. We further explore a low-rank representation of the second-order derivatives and show that it leads to efficient preconditioned updates with the aid of Kronecker-based factorization. The resulting method – named SNOpt – converges much faster than first-order baselines in wall-clock time, and the improvement remains consistent across various applications, e.g. image classification, generative flow, and time-series prediction. Our framework also enables direct architecture optimization, such as the integration time of Neural ODEs, with second-order feedback policies, strengthening the OC perspective as a principled tool of analyzing optimization in deep learning. Our code is available at https://github.com/ghliu/snopt.
Collaborating with Humans without Human Data
Authors: DJ Strouse, Kevin R. McKee, Matthew Botvinick, Edward Hughes, Richard Everett

Collaborating with humans requires rapidly adapting to their individual strengths, weaknesses, and preferences. Unfortunately, most standard multi-agent reinforcement learning techniques, such as self-play (SP) or population play (PP), produce agents that overfit to their training partners and do not generalize well to humans. Alternatively, researchers can collect human data, train a human model using behavioral cloning, and then use that model to train "human-aware" agents ("behavioral cloning play", or BCP). While such an approach can improve the generalization of agents to new human co-players, it involves the onerous and expensive step of collecting large amounts of human data first. Here, we study the problem of how to train agents that collaborate well with human partners without using human data. We argue that the crux of the problem is to produce a diverse set of training partners. Drawing inspiration from successful multi-agent approaches in competitive domains, we find that a surprisingly simple approach is highly effective. We train our agent partner as the best response to a population of self-play agents and their past checkpoints taken throughout training, a method we call Fictitious Co-Play (FCP). Our experiments focus on a two-player collaborative cooking simulator that has recently been proposed as a challenge problem for coordination with humans. We find that FCP agents score significantly higher than SP, PP, and BCP when paired with novel agent and human partners. Furthermore, humans also report a strong subjective preference to partnering with FCP agents over all baselines.
Fast and Memory Efficient Differentially Private-SGD via JL Projections
Authors: Zhiqi Bu, Sivakanth Gopi, Janardhan Kulkarni, Yin Tat Lee, Judy Hanwen Shen, Uthaipon Tantipongpipat

Differentially Private-SGD (DP-SGD) of Abadi et al. and its variations are the only known algorithms for private training of large scale neural networks. This algorithm requires computation of per-sample gradients norms which is extremely slow and memory intensive in practice. In this paper, we present a new framework to design differentially private optimizers called DP-SGD-JL and DP-Adam-JL. Our approach uses Johnson–Lindenstrauss (JL) projections to quickly approximate the per-sample gradient norms without exactly computing them, thus making the training time and memory requirements of our optimizers closer to that of their non-DP versions. Unlike previous attempts to make DP-SGD faster which work only on a subset of network architectures or use compiler techniques, we propose an algorithmic solution which works for any network in a black-box manner which is the main contribution of this paper. To illustrate this, on IMDb dataset, we train a Recurrent Neural Network (RNN) to achieve good privacy-vs-accuracy tradeoff, while being significantly faster than DP-SGD and with a similar memory footprint as non-private SGD.
Joint Semantic Mining for Weakly Supervised RGB-D Salient Object Detection
Authors: Jingjing Li, Wei Ji, Qi Bi, Cheng Yan, Miao Zhang, Yongri Piao, Huchuan Lu, Li Cheng

Training saliency detection models with weak supervisions, e.g., image-level tags or captions, is appealing as it removes the costly demand of per-pixel annotations. Despite the rapid progress of RGB-D saliency detection in fully-supervised setting, it however remains an unexplored territory when only weak supervision signals are available. This paper is set to tackle the problem of weakly-supervised RGB-D salient object detection. The key insight in this effort is the idea of maintaining per-pixel pseudo-labels with iterative refinements by reconciling the multimodal input signals in our joint semantic mining (JSM). Considering the large variations in the raw depth map and the lack of explicit pixel-level supervisions, we propose spatial semantic modeling (SSM) to capture saliency-specific depth cues from the raw depth and produce depth-refined pseudo-labels. Moreover, tags and captions are incorporated via a fill-in-the-blank training in our textual semantic modeling (TSM) to estimate the confidences of competing pseudo-labels. At test time, our model involves only a light-weight sub-network of the training pipeline, i.e., it requires only an RGB image as input, thus allowing efficient inference. Extensive evaluations demonstrate the effectiveness of our approach under the weakly-supervised setting. Importantly, our method could also be adapted to work in both fully-supervised and unsupervised paradigms. In each of these scenarios, superior performance has been attained by our approach with comparing to the state-of-the-art dedicated methods. As a by-product, a CapS dataset is constructed by augmenting existing benchmark training set with additional image tags and captions.
CHIP: CHannel Independence-based Pruning for Compact Neural Networks
Authors: Yang Sui, Miao Yin, Yi Xie, Huy Phan, Saman Aliari Zonouz, Bo Yuan

Filter pruning has been widely used for neural network compression because of its enabled practical acceleration. To date, most of the existing filter pruning works explore the importance of filters via using intra-channel information. In this paper, starting from an inter-channel perspective, we propose to perform efficient filter pruning using Channel Independence, a metric that measures the correlations among different feature maps. The less independent feature map is interpreted as containing less useful information$/$knowledge, and hence its corresponding filter can be pruned without affecting model capacity. We systematically investigate the quantification metric, measuring scheme and sensitiveness$/$reliability of channel independence in the context of filter pruning. Our evaluation results for different models on various datasets show the superior performance of our approach. Notably, on CIFAR-10 dataset our solution can bring $0.75\%$ and $0.94\%$ accuracy increase over baseline ResNet-56 and ResNet-110 models, respectively, and meanwhile the model size and FLOPs are reduced by  $42.8\%$ and  $47.4\%$ (for ResNet-56) and $48.3\%$ and $52.1\%$ (for ResNet-110), respectively. On ImageNet dataset, our approach can achieve $40.8\%$ and $44.8\%$ storage and computation reductions, respectively, with $0.15\%$ accuracy increase over the baseline ResNet-50 model. The code is available at https://github.com/Eclipsess/CHIP_NeurIPS2021.
Dynamics-regulated kinematic policy for egocentric pose estimation
Authors: Zhengyi Luo, Ryo Hachiuma, Ye Yuan, Kris M. Kitani

We propose a method for object-aware 3D egocentric pose estimation that tightly integrates kinematics modeling, dynamics modeling, and scene object information. Unlike prior kinematics or dynamics-based approaches where the two components are used disjointly, we synergize the two approaches via dynamics-regulated training. At each timestep, a kinematic model is used to provide a target pose using video evidence and simulation state. Then, a prelearned dynamics model attempts to mimic the kinematic pose in a physics simulator. By comparing the pose instructed by the kinematic model against the pose generated by the dynamics model, we can use their misalignment to further improve the kinematic model. By factoring in the 6DoF pose of objects (e.g., chairs, boxes) in the scene, we demonstrate for the first time, the ability to estimate physically-plausible 3D human-object interactions using a single wearable camera. We evaluate our egocentric pose estimation method in both controlled laboratory settings and real-world scenarios.
MAUVE: Measuring the Gap Between Neural Text and Human Text using Divergence Frontiers
Authors: Krishna Pillutla, Swabha Swayamdipta, Rowan Zellers, John Thickstun, Sean Welleck, Yejin Choi, Zaid Harchaoui

As major progress is made in open-ended text generation, measuring how close machine-generated text is to human language remains a critical open problem. We introduce Mauve, a comparison measure for open-ended text generation, which directly compares the learnt distribution from a text generation model to the distribution of human-written text using divergence frontiers. Mauve scales up to modern text generation models by computing information divergences in a quantized embedding space. Through an extensive empirical study on three open-ended generation tasks, we find that Mauve identifies known properties of generated text, scales naturally with model size, and correlates with human judgments, with fewer restrictions than existing distributional evaluation metrics.
Is Automated Topic Model Evaluation Broken? The Incoherence of Coherence
Authors: Alexander Hoyle, Pranav Goel, Andrew Hian-Cheong, Denis Peskov, Jordan Lee Boyd-Graber, Philip Resnik

Topic model evaluation, like evaluation of other unsupervised methods, can be contentious. However, the field has coalesced around automated estimates of topic coherence, which rely on the frequency of word co-occurrences in a reference corpus. Contemporary neural topic models surpass classical ones according to these metrics. At the same time, topic model evaluation suffers from a validation gap: automated coherence, developed for classical models, has not been validated using human experimentation for neural models. In addition, a meta-analysis of topic modeling literature reveals a substantial standardization gap in automated topic modeling benchmarks. To address the validation gap, we compare automated coherence with the two most widely accepted human judgment tasks: topic rating and word intrusion. To address the standardization gap, we systematically evaluate a dominant classical model and two state-of-the-art neural models on two commonly used datasets. Automated evaluations declare a winning model when corresponding human evaluations do not, calling into question the validity of fully automatic evaluations independent of human judgments.
Efficient Combination of Rematerialization and Offloading for Training DNNs
Authors: Olivier Beaumont, Lionel Eyraud-Dubois, Alena SHILOVA

Rematerialization and offloading are two well known strategies to save memory during the training phase of deep neural networks, allowing data scientists to consider larger models, batch sizes or higher resolution data. Rematerialization trades memory for computation time, whereas Offloading trades memory for data movements. As these two resources are independent, it is appealing to consider the simultaneous combination of both strategies to save even more memory. We precisely model the costs and constraints corresponding to Deep Learning frameworks such as PyTorch or Tensorflow, we propose optimal algorithms to find a valid sequence of memory-constrained operations and finally, we evaluate the performance of proposed algorithms on realistic networks and computation platforms. Our experiments show that the possibility to offload can remove one third of the overhead of rematerialization, and that together they can reduce the memory used for activations by a factor 4 to 6, with an overhead below 20%.
Towards Multi-Grained Explainability for Graph Neural Networks
Authors: Xiang Wang, Yingxin Wu, An Zhang, Xiangnan He, Tat-seng Chua

When a graph neural network (GNN) made a prediction, one raises question about explainability: “Which fraction of the input graph is most inﬂuential to the model’s decision?” Producing an answer requires understanding the model’s inner workings in general and emphasizing the insights on the decision for the instance at hand. Nonetheless, most of current approaches focus only on one aspect: (1) local explainability, which explains each instance independently, thus hardly exhibits the class-wise patterns; and (2) global explainability, which systematizes the globally important patterns, but might be trivial in the local context. This dichotomy limits the ﬂexibility and effectiveness of explainers greatly. A performant paradigm towards multi-grained explainability is until-now lacking and thus a focus of our work. In this work, we exploit the pre-training and ﬁne-tuning idea to develop our explainer and generate multi-grained explanations. Speciﬁcally, the pre-training phase accounts for the contrastivity among different classes, so as to highlight the class-wise characteristics from a global view; afterwards, the ﬁne-tuning phase adapts the explanations in the local context. Experiments on both synthetic and real-world datasets show the superiority of our explainer, in terms of AUC on explaining graph classiﬁcation over the leading baselines. Our codes and datasets are available at https://github.com/Wuyxin/ReFine.
Provable Model-based Nonlinear Bandit and Reinforcement Learning: Shelve Optimism, Embrace Virtual Curvature
Authors: Kefan Dong, Jiaqi Yang, Tengyu Ma

This paper studies model-based bandit and reinforcement learning (RL) with nonlinear function approximations. We propose to study convergence to approximate local maxima because we show that global convergence is statistically intractable even for one-layer neural net bandit with a deterministic reward. For both nonlinear bandit and RL, the paper presents a model-based algorithm, Virtual Ascent with Online Model Learner (ViOlin), which provably converges to a local maximum with sample complexity that only depends on the sequential Rademacher complexity of the model class. Our results imply novel global or local regret bounds on several concrete settings such as linear bandit with finite or sparse model class, and two-layer neural net bandit. A key algorithmic insight is that optimism may lead to over-exploration even for two-layer neural net model class. On the other hand, for convergence to local maxima, it suffices to maximize the virtual return if the model can also reasonably predict the gradient and Hessian of the real return.
Hyperbolic Procrustes Analysis Using Riemannian Geometry
Authors: Ya-Wei Eileen Lin, Yuval Kluger, Ronen Talmon

Label-free alignment between datasets collected at different times, locations, or by different instruments is a fundamental scientific task. Hyperbolic spaces have recently provided a fruitful foundation for the development of informative representations of hierarchical data. Here, we take a purely geometric approach for label-free alignment of hierarchical datasets and introduce hyperbolic Procrustes analysis (HPA). HPA consists of new implementations of the three prototypical Procrustes analysis components: translation, scaling, and rotation, based on the Riemannian geometry of the Lorentz model of hyperbolic space. We analyze the proposed components, highlighting their useful properties for alignment. The efficacy of HPA, its theoretical properties, stability and computational efficiency are demonstrated in simulations. In addition, we showcase its performance on three batch correction tasks involving gene expression and mass cytometry data. Specifically, we demonstrate high-quality unsupervised batch effect removal from data acquired at different sites and with different technologies that outperforms recent methods for label-free alignment in hyperbolic spaces.
Deep Molecular Representation Learning via Fusing Physical and Chemical Information
Authors: Shuwen Yang, Ziyao Li, Guojie Song, Lingsheng Cai

Molecular representation learning is the first yet vital step in combining deep learning and molecular science. To push the boundaries of molecular representation learning, we present PhysChem, a novel neural architecture that learns molecular representations via fusing physical and chemical information of molecules. PhysChem is composed of a physicist network (PhysNet) and a chemist network (ChemNet). PhysNet is a neural physical engine that learns molecular conformations through simulating molecular dynamics with parameterized forces; ChemNet implements geometry-aware deep message-passing to learn chemical / biomedical properties of molecules. Two networks specialize in their own tasks and cooperate by providing expertise to each other. By fusing physical and chemical information, PhysChem achieved state-of-the-art performances on MoleculeNet, a standard molecular machine learning benchmark. The effectiveness of PhysChem was further corroborated on cutting-edge datasets of SARS-CoV-2.
Stochastic optimization under time drift: iterate averaging, step-decay schedules, and high probability guarantees
Authors: Joshua Cutler, Dmitriy Drusvyatskiy, Zaid Harchaoui

We consider the problem of minimizing a convex function that is evolving in time according to unknown and possibly stochastic dynamics. Such problems abound in the machine learning and signal processing literature, under the names of concept drift and stochastic tracking. We provide novel non-asymptotic convergence guarantees for stochastic algorithms with iterate averaging, focusing on bounds valid both in expectation and with high probability. Notably, we show that the tracking efficiency of the proximal stochastic gradient method depends only logarithmically on the initialization quality when equipped with a step-decay schedule.
Improving Visual Quality of Image Synthesis by A Token-based Generator with Transformers
Authors: Yanhong Zeng, Huan Yang, Hongyang Chao, Jianbo Wang, Jianlong Fu

We present a new perspective of achieving image synthesis by viewing this task as a visual token generation problem. Different from existing paradigms that directly synthesize a full image from a single input (e.g., a latent code), the new formulation enables a flexible local manipulation for different image regions, which makes it possible to learn content-aware and fine-grained style control for image synthesis. Specifically, it takes as input a sequence of latent tokens to predict the visual tokens for synthesizing an image. Under this perspective, we propose a token-based generator (i.e., TokenGAN). Particularly, the TokenGAN inputs two semantically different visual tokens, i.e., the learned constant content tokens and the style tokens from the latent space. Given a sequence of style tokens, the TokenGAN is able to control the image synthesis by assigning the styles to the content tokens by attention mechanism with a Transformer. We conduct extensive experiments and show that the proposed TokenGAN has achieved state-of-the-art results on several widely-used image synthesis benchmarks, including FFHQ and LSUN CHURCH with different resolutions. In particular, the generator is able to synthesize high-fidelity images with (1024x1024) size, dispensing with convolutions entirely.
Beyond Smoothness: Incorporating Low-Rank Analysis into Nonparametric Density Estimation
Authors: Robert A. Vandermeulen, Antoine Ledent

The construction and theoretical analysis of the most popular universally consistent nonparametric density estimators hinge on one functional property: smoothness. In this paper we investigate the theoretical implications of incorporating a multi-view latent variable model, a type of low-rank model, into nonparametric density estimation. To do this we perform extensive analysis on histogram-style estimators that integrate a multi-view model. Our analysis culminates in showing that there exists a universally consistent histogram-style estimator that converges to any multi-view model with a finite number of Lipschitz continuous components at a rate of $\widetilde{O}(1/\sqrt[3]{n})$ in $L^1$ error. In contrast, the standard histogram estimator can converge at a rate slower than $1/\sqrt[d]{n}$ on the same class of densities. We also introduce a new nonparametric latent variable model based on the Tucker decomposition. A rudimentary implementation of our estimators experimentally demonstrates a considerable performance improvement over the standard histogram estimator. We also provide a thorough analysis of the sample complexity of our Tucker decomposition-based model and a variety of other results. Thus, our paper provides solid theoretical foundations for extending low-rank techniques to the nonparametric setting.