import numpy as np from scipy import signal from .utils.jade import jadeR from .base import VHRMethod class ICA(VHRMethod): methodName = 'ICA' def __init__(self, **kwargs): self.tech = kwargs['ICAmethod'] super(ICA, self).__init__(**kwargs) def apply(self, X): """ ICA method """ # -- JADE (ICA) if self.tech == 'jade': W = self.__jade(X) elif 'fastICA': W = self.__fastICA(X) bvp = np.dot(W,X) # 3-dim signal!! return bvp def __jade(self, X): W = np.asarray(jadeR(X, 3, False)) return W def __fastICA(self, X): from sklearn.decomposition import FastICA, PCA from numpy.linalg import inv, eig # -- PCA pca = PCA(n_components=3) Y = pca.fit_transform(X) # -- ICA ica = FastICA(n_components=3, max_iter=2000) S = ica.fit_transform(Y) return S.T