mtybilly/Instruct2DS huggingface dataset:
Towards Evaluating Transfer-based Attacks Systematically, Practically, and Fairly
Authors: Yiwen Guo, Wangmeng Zuo, Hao Chen Qizhang Li
Published in: Advances in Neural Information Processing Systems 36  (NeurIPS 2023) (Main Conference Track), 2023

Abstract: The adversarial vulnerability of deep neural networks (DNNs) has drawn great attention due to the security risk of applying these models in real-world applications. Based on transferability of adversarial examples, an increasing number of transfer-based methods have been developed to fool black-box DNN models whose architecture and parameters are inaccessible. Although tremendous effort has been exerted, there still lacks a standardized benchmark that could be taken advantage of to compare these methods systematically, fairly, and practically. Our investigation shows that the evaluation of some methods needs to be more reasonable and more thorough to verify their effectiveness, to avoid, for example, unfair comparison and insufficient consideration of possible substitute/victim models. Therefore, we establish a transfer-based attack benchmark (TA-Bench) which implements 30+ methods. In this paper, we evaluate and compare them comprehensively on 10 popular substitute/victim models on ImageNet. New insights about the effectiveness of these methods are gained and guidelines for future evaluations are provided.
Automatic Clipping: Differentially Private Deep Learning Made Easier and Stronger
Authors: Yu-Xiang Wang, Sheng Zha, George Karypis Zhiqi Bu
Published in: Advances in Neural Information Processing Systems 36  (NeurIPS 2023) (Main Conference Track), 2023

Abstract: Per-example gradient clipping is a key algorithmic step that enables practical differential private (DP) training for deep learning models. The choice of clipping threshold $R$, however, is vital for achieving high accuracy under DP. We propose an easy-to-use replacement, called automatic clipping, that eliminates the need to tune $R$ for any DP optimizers, including DP-SGD, DP-Adam, DP-LAMB and many others.The automatic variants are as private and computationally efficient as existing DP optimizers, but require no DP-specific hyperparameters and thus make DP training as amenable as the standard non-private training. We give a rigorous convergence analysis of automatic DP-SGD in the non-convex setting, showing that it can enjoy an asymptotic convergence rate that matches the standard SGD, under a symmetric gradient noise assumption of the per-sample gradients (commonly used in the non-DP literature). We demonstrate on various language and vision tasks that automatic clipping outperforms or matches the state-of-the-art, and can be easily employed with minimal changes to existing codebases.
Error Discovery By Clustering Influence Embeddings
Authors: Julius Adebayo, Sarah Tan, Diego Garcia-Olano, Narine Kokhlikyan Fulton Wang
Published in: Advances in Neural Information Processing Systems 36  (NeurIPS 2023) (Main Conference Track), 2023

Abstract: We present a method for identifying groups of test examples---slices---on which a model under-performs, a task now known as slice discovery. We formalize coherence---a requirement that erroneous predictions, within a slice, should be wrong for the same reason---as a key property that any slice discovery method should satisfy.  We then use influence functions to derive a new slice discovery method, InfEmbed, which satisfies coherence by returning slices whose examples are influenced similarly by the training data.  InfEmbed is simple, and consists of applying K-Means clustering to a novel representation we deem influence embeddings. We show InfEmbed outperforms current state-of-the-art methods on 2 benchmarks, and is effective for model debugging across several case studies.
BadTrack: A Poison-Only Backdoor Attack on Visual Object Tracking
Authors: Jiaqian Yu, Yiwei Chen, Siyang Pan, Qiang Wang, Zhi Wang Bin Huang
Published in: Advances in Neural Information Processing Systems 36  (NeurIPS 2023) (Main Conference Track), 2023

Abstract: Visual object tracking (VOT) is one of the most fundamental tasks in computer vision community. State-of-the-art VOT trackers extract positive and negative examples that are used to guide the tracker to distinguish the object from the background. In this paper, we show that this characteristic can be exploited to introduce new threats and hence propose a simple yet effective poison-only backdoor attack. To be specific, we poison a small part of the training data by attaching a predefined trigger pattern to the background region of each video frame, so that the trigger appears almost exclusively in the extracted negative examples. To the best of our knowledge, this is the first work that reveals the threat of poison-only backdoor attack on VOT trackers. We experimentally show that our backdoor attack can significantly degrade the performance of both two-stream Siamese and one-stream Transformer trackers on the poisoned data while gaining comparable performance with the benign trackers on the clean data.
Spiking PointNet: Spiking Neural Networks for Point Clouds
Authors: Zhe Ma, Yuanpei Chen, Weihang Peng, Xiaode Liu, Yuhan Zhang, Yufei Guo Dayong Ren
Published in: Advances in Neural Information Processing Systems 36  (NeurIPS 2023) (Main Conference Track), 2023

Abstract: Recently, Spiking Neural Networks (SNNs), enjoying extreme energy efficiency, have drawn much research attention on 2D visual recognition and shown gradually increasing application potential. However, it still remains underexplored whether SNNs can be generalized to 3D recognition. To this end, we present Spiking PointNet in the paper, the first spiking neural model for efficient deep learning on point clouds. We discover that the two huge obstacles limiting the application of SNNs in point clouds are: the intrinsic optimization obstacle of SNNs that impedes the training of a big spiking model with large time steps, and the expensive memory and computation cost of PointNet that makes training a big spiking point model unrealistic. To solve the problems simultaneously, we present a trained-less but learning-more paradigm for Spiking PointNet with theoretical justifications and in-depth experimental analysis. In specific, our Spiking PointNet is trained with only a single time step but can obtain better performance with multiple time steps inference, compared to the one trained directly with multiple time steps. We conduct various experiments on ModelNet10, ModelNet40 to demonstrate the effectiveness of Sipiking PointNet. Notably, our Spiking PointNet even can outperform its ANN counterpart, which is rare in the SNN field thus providing a potential research direction for the following work. Moreover, Spiking PointNet shows impressive speedup and storage saving in the training phase. Our code is open-sourced at https://github.com/DayongRen/Spiking-PointNet.
A Sublinear-Time Spectral Clustering Oracle with Improved Preprocessing Time
Authors: Pan Peng Ranran Shen
Published in: Advances in Neural Information Processing Systems 36  (NeurIPS 2023) (Main Conference Track), 2023

Abstract: We address the problem of designing a sublinear-time spectral clustering oracle for graphs that exhibit strong clusterability. Such graphs contain $k$ latent clusters, each characterized by a large inner conductance (at least $\varphi$) and a small outer conductance (at most $\varepsilon$). Our aim is to preprocess the graph to enable clustering membership queries, with the key requirement that both preprocessing and query answering should be performed in sublinear time, and the resulting partition should be consistent with a $k$-partition that is close to the ground-truth clustering. Previous oracles have relied on either a $\textrm{poly}(k)\log n$ gap between inner and outer conductances or exponential (in $k/\varepsilon$) preprocessing time. Our algorithm relaxes these assumptions, albeit at the cost of a slightly higher misclassification ratio. We also show that our clustering oracle is robust against a few random edge deletions. To validate our theoretical bounds, we conducted experiments on synthetic networks.
Boosting with Tempered Exponential Measures
Authors: Ehsan Amid, Manfred Warmuth Richard Nock
Published in: Advances in Neural Information Processing Systems 36  (NeurIPS 2023) (Main Conference Track), 2023

Abstract: One of the most popular ML algorithms, AdaBoost, can bederived from the dual of a relative entropyminimization problem subject to the fact that the positive weightson the examples sum to one. Essentially, harder examples receive higher probabilities. We generalize this setup to the recently introduced *temperedexponential measure*s (TEMs) where normalization is enforced on a specific power of the measure and not the measure itself.TEMs are indexed by a parameter $t$ and generalize exponential families ($t=1$). Our algorithm, $t$-AdaBoost, recovers AdaBoost as a special case ($t=1$). We show that $t$-AdaBoost retains AdaBoost's celebrated exponential convergence rate when $t\in [0,1)$ while allowing a slight improvement of the rate's hidden constant compared to $t=1$. $t$-AdaBoost partially computes on a generalization of classical arithmetic over the reals and brings notable properties like guaranteed bounded leveraging coefficients for $t\in [0,1)$. From the loss that $t$-AdaBoost minimizes (a generalization of the exponential loss), we show how to derive a new family of *tempered* losses for the induction of domain-partitioning classifiers like decision trees. Crucially, strict properness is ensured for all while their boosting rates span the full known spectrum. Experiments using $t$-AdaBoost+trees display that significant leverage can be achieved by tuning $t$.
DP-HyPO: An Adaptive Private Framework for Hyperparameter Optimization
Authors: Sheng Gao, Huanyu Zhang, Weijie Su, Milan Shen Hua Wang
Published in: Advances in Neural Information Processing Systems 36  (NeurIPS 2023) (Main Conference Track), 2023

Abstract: Hyperparameter optimization, also known as hyperparameter tuning, is a widely recognized technique for improving model performance. Regrettably, when training private ML models, many practitioners often overlook the privacy risks associated with hyperparameter optimization, which could potentially expose sensitive information about the underlying dataset.Currently, the sole existing approach to allow privacy-preserving hyperparameter optimization is to uniformly and randomly select hyperparameters for a number of runs, subsequently reporting the best-performing hyperparameter.In contrast, in non-private settings, practitioners commonly utilize "adaptive" hyperparameter optimization methods such as Gaussian Process-based optimization, which select the next candidate based on information gathered from previous outputs.This substantial contrast between private and non-private hyperparameter optimization underscores a critical concern. In our paper, we introduce DP-HyPO, a pioneering framework for "adaptive" private hyperparameter optimization, aiming to bridge the gap between private and non-private hyperparameter optimization. To accomplish this, we provide a comprehensive differential privacy analysis of our framework. Furthermore, we empirically demonstrate the effectiveness of DP-HyPO on a diverse set of real-world datasets.
Active Learning-Based Species Range Estimation
Authors: Elijah Cole, Grant Van Horn, Oisin Mac Aodha Christian Lange
Published in: Advances in Neural Information Processing Systems 36  (NeurIPS 2023) (Main Conference Track), 2023

Abstract: We propose a new active learning approach for efficiently estimating the geographic range of a species from a limited number of on the ground observations. We model the range of an unmapped species of interest as the weighted combination of estimated ranges obtained from a set of different species. We show that it is possible to generate this candidate set of ranges by using models that have been trained on large weakly supervised community collected observation data. From this, we develop a new active querying approach that sequentially selects geographic locations to visit that best reduce our uncertainty over an unmapped species’ range. We conduct a detailed evaluation of our approach and compare it to existing active learning methods using an evaluation dataset containing expert-derived ranges for one thousand species. Our results demonstrate that our method outperforms alternative active learning methods and approaches the performance of end-to-end trained models, even when only using a fraction of the data. This highlights the utility of active learning via transfer learned spatial representations for species range estimation. It also emphasizes the value of leveraging emerging large-scale crowdsourced datasets, not only for modeling a species' range, but also for actively discovering them.
One-Step Diffusion Distillation via Deep Equilibrium Models
Authors: Ashwini Pokle, J. Zico Kolter Zhengyang Geng
Published in: Advances in Neural Information Processing Systems 36  (NeurIPS 2023) (Main Conference Track), 2023

Abstract: Diffusion models excel at producing high-quality samples but naively require hundreds of iterations, prompting multiple attempts to distill the generation process into a faster network. However, many existing approaches suffer from a variety of challenges: the process for distillation training can be complex, often requiring multiple training stages, and the resulting models perform poorly when utilized in single-step generative applications. In this paper, we introduce a simple yet effective means of distilling diffusion models *directly* from the initial noise to the resulting image. Of particular importance to our approach is to leverage a new Deep Equilibrium (DEQ) model as the distilled architecture: the Generative Equilibrium Transformer (GET). Our method enables fully offline training with just noise/image pairs from the diffusion model while achieving superior performance compared to existing one-step methods on comparable training budgets. We demonstrate that the DEQ architecture is crucial to this capability, as GET matches a $5\times$ larger ViT in terms of FID scores while striking a critical balance of computational cost and image quality. Code, checkpoints, and datasets are available [here](https://github.com/locuslab/get).
Discrete-Smoothness in Online Algorithms with Predictions
Authors: Debmalya Panigrahi, Noam Touitou Yossi Azar
Published in: Advances in Neural Information Processing Systems 36  (NeurIPS 2023) (Main Conference Track), 2023

Abstract: In recent years, there has been an increasing focus on designing online algorithms with (machine-learned) predictions. The ideal learning-augmented algorithm is comparable to the optimum when given perfect predictions (consistency), to the best online approximation for arbitrary predictions (robustness), and should interpolate between these extremes as a smooth function of the prediction error. In this paper, we quantify these guarantees in terms of a general property that we call discrete-smoothness, and achieve discrete-smooth algorithms for online covering, specifically the facility location and set cover problems. For set cover, our work improves the results of Bamas, Maggiori, and Svensson (2020) by augmenting consistency and robustness with smoothness guarantees. For facility location, our work improves on prior work by Almanza et al. (2021) by generalizing to nonuniform costs and also providing smoothness guarantees by augmenting consistency and robustness.
A Performance-Driven Benchmark for Feature Selection in Tabular Deep Learning
Authors: Roman Levin, Gowthami Somepalli, Jonas Geiping, C. Bayan Bruss, Andrew G Wilson, Tom Goldstein, Micah Goldblum Valeriia Cherepanova
Published in: Advances in Neural Information Processing Systems 36  (NeurIPS 2023) (Datasets and Benchmarks Track), 2023

Abstract: Academic tabular benchmarks often contain small sets of curated features. In contrast, data scientists typically collect as many features as possible into their datasets, and even engineer new features from existing ones. To prevent over-fitting in subsequent downstream modeling, practitioners commonly use automated feature selection methods that identify a reduced subset of informative features. Existing benchmarks for tabular feature selection consider classical downstream models, toy synthetic datasets, or do not evaluate feature selectors on the basis of downstream performance. We construct a challenging feature selection benchmark evaluated on downstream neural networks including transformers, using real datasets and multiple methods for generating extraneous features. We also propose an input-gradient-based analogue of LASSO for neural networks that outperforms classical feature selection methods on challenging problems such as selecting from corrupted or second-order features.
Riemannian Projection-free Online Learning
Authors: Guanghui Wang, Jacob D. Abernethy Zihao Hu
Published in: Advances in Neural Information Processing Systems 36  (NeurIPS 2023) (Main Conference Track), 2023

Abstract: The projection operation is a critical component in a wide range of optimization algorithms, such as online gradient descent (OGD), for enforcing constraints and achieving optimal regret bounds. However, it suffers from computational complexity limitations in high-dimensional settings or when dealing with ill-conditioned constraint sets. Projection-free algorithms address this issue by replacing the projection oracle with more efficient optimization subroutines. But to date, these methods have been developed primarily in the Euclidean setting, and while there has been growing interest in optimization on  Riemannian manifolds, there has been essentially no work in trying to utilize projection-free tools here. An apparent issue is that non-trivial affine functions  are generally non-convex in such domains. In this paper, we present methods for obtaining sub-linear regret guarantees in online geodesically convex optimization  on curved spaces for two scenarios: when we have access to (a) a separation oracle or (b) a linear optimization oracle. For geodesically convex losses, and  when a separation oracle is available, our algorithms achieve $O(T^{\frac{1}{2}})$, $O(T^{\frac{3}{4}})$ and $O(T^{\frac{1}{2}})$ adaptive regret guarantees in the full  information setting, the bandit setting with one-point feedback and the bandit setting with two-point feedback, respectively. When a linear optimization oracle is   available, we obtain regret rates of $O(T^{\frac{3}{4}})$ for geodesically convex losses and $O(T^{\frac{2}{3}}\log T)$ for strongly geodesically convex losses.
SwiFT: Swin 4D fMRI Transformer
Authors: Junbeom Kwon, Sunghwan Joo, Sangyoon Bae, Donggyu Lee, Yoonho Jung, Shinjae Yoo, Jiook Cha, Taesup Moon Peter Kim
Published in: Advances in Neural Information Processing Systems 36  (NeurIPS 2023) (Main Conference Track), 2023

Abstract: Modeling spatiotemporal brain dynamics from high-dimensional data, such as functional Magnetic Resonance Imaging (fMRI), is a formidable task in neuroscience. Existing approaches for fMRI analysis utilize hand-crafted features, but the process of feature extraction risks losing essential information in fMRI scans. To address this challenge, we present SwiFT (Swin 4D fMRI Transformer), a Swin Transformer architecture that can learn brain dynamics directly from fMRI volumes in a memory and computation-efficient manner. SwiFT achieves this by implementing a 4D window multi-head self-attention mechanism and absolute positional embeddings. We evaluate SwiFT using multiple large-scale resting-state fMRI datasets, including the Human Connectome Project (HCP), Adolescent Brain Cognitive Development (ABCD), and UK Biobank (UKB) datasets, to predict sex, age, and cognitive intelligence. Our experimental outcomes reveal that SwiFT consistently outperforms recent state-of-the-art models. Furthermore, by leveraging its end-to-end learning capability, we show that contrastive loss-based self-supervised pre-training of SwiFT can enhance performance on downstream tasks. Additionally, we employ an explainable AI method to identify the brain regions associated with sex classification. To our knowledge, SwiFT is the first Swin Transformer architecture to process dimensional spatiotemporal brain functional data in an end-to-end fashion. Our work holds substantial potential in facilitating scalable learning of functional brain imaging in neuroscience research by reducing the hurdles associated with applying Transformer models to high-dimensional fMRI.
Consistent Diffusion Models: Mitigating Sampling Drift by Learning to be Consistent
Authors: Yuval Dagan, Alex Dimakis, Constantinos Daskalakis Giannis Daras
Published in: Advances in Neural Information Processing Systems 36  (NeurIPS 2023) (Main Conference Track), 2023

Abstract: Imperfect score-matching leads to a shift between the training and the sampling distribution of diffusion models. Due to the recursive nature of the generation process, errors in previous steps yield sampling iterates that drift away from the training distribution. However, the standard training objective via Denoising Score Matching (DSM) is only designed to optimize over non-drifted data. To train on drifted data, we propose to enforce a \emph{Consistency} property (CP) which states that predictions of the model on its owngenerated data are consistent across time. Theoretically, we show that the differential equation that describes CP together with the one that describes a conservative vector field, have a unique solution given some initial condition. Consequently, if the score is learned well on non-drifted points via DSM (enforcing the true initial condition) then enforcing CP on drifted points propagates true score values. Empirically, we show that enforcing CP improves the generation quality for conditional and unconditional generation on CIFAR-10, and in AFHQ and FFHQ. We open-source our code and models: https://github.com/giannisdaras/cdm.
A High-Resolution Dataset for Instance Detection with Multi-View Object Capture
Authors: Yunhan Zhao, Nahyun Kwon, Jeeeun Kim, Yanan Li, Shu Kong QIANQIAN SHEN
Published in: Advances in Neural Information Processing Systems 36  (NeurIPS 2023) (Datasets and Benchmarks Track), 2023

Abstract: Instance detection (InsDet) is a long-lasting problem in robotics and computer vision, aiming to detect object instances (predefined by some visual examples) in a cluttered scene. Despite its practical significance, its advancement is overshadowed by Object Detection, which aims to detect objects belonging to some predefined classes. One major reason is that current InsDet datasets are too small in scale by today's standards. For example, the popular InsDet dataset GMU (published in 2016) has only 23 instances, far less than  COCO (80 classes), a well-known object detection dataset published in 2014. We are motivated to introduce a new InsDet dataset and protocol. First, we define a realistic setup for InsDet: training data consists of multi-view instance captures, along with diverse scene images allowing synthesizing training images by pasting instance images on them with free box annotations. Second, we release a real-world database, which contains multi-view capture of 100 object instances, and high-resolution (6k$\times$8k) testing images. Third, we extensively study baseline methods for InsDet on our dataset, analyze their performance and suggest future work. Somewhat surprisingly, using the off-the-shelf  class-agnostic segmentation model (Segment Anything Model, SAM) and the self-supervised feature representation DINOv2 performs the best, achieving $>$10 AP better than end-to-end trained InsDet models that repurpose object detectors (e.g., FasterRCNN and RetinaNet).
AVIDa-hIL6: A Large-Scale VHH Dataset Produced from an Immunized Alpaca for Predicting Antigen-Antibody Interactions
Authors: Hiroyuki Yamazaki, Ryota Maeda, Ryotaro Tamura, Jennifer Wei, Zelda E. Mariet, Poomarin Phloyphisut, Hidetoshi Shimokawa, Joseph R. Ledsam, Lucy Colwell, Akihiro Imura Hirofumi Tsuruta
Published in: Advances in Neural Information Processing Systems 36  (NeurIPS 2023) (Datasets and Benchmarks Track), 2023

Abstract: Antibodies have become an important class of therapeutic agents to treat human diseases.To accelerate therapeutic antibody discovery, computational methods, especially machine learning, have attracted considerable interest for predicting specific interactions between antibody candidates and target antigens such as viruses and bacteria.However, the publicly available datasets in existing works have notable limitations, such as small sizes and the lack of non-binding samples and exact amino acid sequences.To overcome these limitations, we have developed AVIDa-hIL6, a large-scale dataset for predicting antigen-antibody interactions in the variable domain of heavy chain of heavy chain antibodies (VHHs), produced from an alpaca immunized with the human interleukin-6 (IL-6) protein, as antigens.By leveraging the simple structure of VHHs, which facilitates identification of full-length amino acid sequences by DNA sequencing technology, AVIDa-hIL6 contains 573,891 antigen-VHH pairs with amino acid sequences.All the antigen-VHH pairs have reliable labels for binding or non-binding, as generated by a novel labeling method.Furthermore, via introduction of artificial mutations, AVIDa-hIL6 contains 30 different mutants in addition to wild-type IL-6 protein.This characteristic provides opportunities to develop machine learning models for predicting changes in antibody binding by antigen mutations.We report experimental benchmark results on AVIDa-hIL6 by using machine learning models.The results indicate that the existing models have potential, but further research is needed to generalize them to predict effective antibodies against unknown mutants.The dataset is available at https://avida-hil6.cognanous.com.
Token-Scaled Logit Distillation for Ternary Weight Generative Language Models
Authors: Sihwa Lee, Janghwan Lee, Sukjin Hong, Du-Seong Chang, Wonyong Sung, Jungwook Choi Minsoo Kim
Published in: Advances in Neural Information Processing Systems 36  (NeurIPS 2023) (Main Conference Track), 2023

Abstract: Generative Language Models (GLMs) have shown impressive performance in tasks such as text generation, understanding, and reasoning. However, the large model size poses challenges for practical deployment. To solve this problem, Quantization-Aware Training (QAT) has become increasingly popular. However, current QAT methods for generative models have resulted in a noticeable loss of accuracy. To counteract this issue, we propose a novel knowledge distillation method specifically designed for GLMs. Our method, called token-scaled logit distillation, prevents overfitting and provides superior learning from the teacher model and ground truth. This research marks the first evaluation of ternary weight quantization-aware training of large-scale GLMs with less than 1.0 degradation in perplexity and achieves enhanced accuracy in tasks like common-sense QA and arithmetic reasoning  as well as natural language understanding. Our code is available at https://github.com/aiha-lab/TSLD.
Efficient Exploration in Continuous-time Model-based Reinforcement Learning
Authors: Jonas Hübotter, Bhavya Sukhija, Florian Dorfler, Andreas Krause Lenart Treven
Published in: Advances in Neural Information Processing Systems 36  (NeurIPS 2023) (Main Conference Track), 2023

Abstract: Reinforcement learning algorithms typically consider discrete-time dynamics, even though the underlying systems are often continuous in time. In this paper, we introduce a model-based reinforcement learning algorithm that represents continuous-time dynamics using nonlinear ordinary differential equations (ODEs). We capture epistemic uncertainty using well-calibrated probabilistic models, and use the optimistic principle for exploration. Our regret bounds surface the importance of the measurement selection strategy (MSS), since in continuous time we not only must decide how to explore, but also when to observe the underlying system. Our analysis demonstrates that the regret is sublinear when modeling ODEs with Gaussian Processes (GP) for common choices of MSS, such as equidistant sampling. Additionally, we propose an adaptive, data-dependent, practical MSS that, when combined with GP dynamics, also achieves sublinear regret with significantly fewer samples. We showcase the benefits of continuous-time modeling over its discrete-time counterpart, as well as our proposed adaptive MSS over standard baselines, on several applications.
On Learning Necessary and Sufficient Causal Graphs
Authors: Yixin Wang, Michael I. Jordan, Rui Song Hengrui Cai
Published in: Advances in Neural Information Processing Systems 36  (NeurIPS 2023) (Main Conference Track), 2023

Abstract: The causal revolution has stimulated interest in understanding complex relationships in various fields. Most of the existing methods aim to discover causal relationships among all variables within a complex large-scale graph. However, in practice, only a small subset of variables in the graph are relevant to the outcomes of interest. Consequently, causal estimation with the full causal graph---particularly given limited data---could lead to numerous falsely discovered, spurious variables that exhibit high correlation with, but exert no causal impact on, the target outcome. In this paper, we propose learning a class of necessary and sufficient causal graphs (NSCG) that exclusively comprises causally relevant variables for an outcome of interest, which we term causal features. The key idea is to employ probabilities of causation to systematically evaluate the importance of features in the causal graph, allowing us to identify a subgraph relevant to the outcome of interest. To learn NSCG from data, we develop a necessary and sufficient causal structural learning (NSCSL) algorithm, by establishing theoretical properties and relationships between probabilities of causation and natural causal effects of features. Across empirical studies of simulated and real data, we demonstrate that NSCSL outperforms existing algorithms and can reveal crucial yeast genes for target heritable traits of interest.
Renku: a platform for sustainable data science
Authors: Chandrasekhar Ramakrishnan, Michele Volpi, Fernando Perez-Cruz, Lilian Gasser, Firat Ozdemir, Patrick Paitz, Mohammad Alisafaee, Philipp Fischer, Ralf Grubenmann, Eliza Harris, Tasko Olevski, Carl Remlinger, Luis Salamanca, Elisabet Capon Garcia, Lorenzo Cavazzi, Jakub Chrobasik, Darlin Cordoba Osnas, Alessandro Degano, Jimena Dupre, Wesley Johnson, Eike Kettner, Laura Kinkead, Sean D. Murphy, Flora Thiebaut, Olivier Verscheure Rok Roškar
Published in: Advances in Neural Information Processing Systems 36  (NeurIPS 2023) (Datasets and Benchmarks Track), 2023

Abstract: Data and code working together is fundamental to machine learning (ML), but the context around datasets and interactions between datasets and code are in general captured only rudimentarily. Context such as how the dataset was prepared and created, what source data were used, what code was used in processing, how the dataset evolved, and where it has been used and reused can provide much insight, but this information is often poorly documented. That is unfortunate since it makes datasets into black-boxes with potentially hidden characteristics that have downstream consequences. We argue that making dataset preparation more accessible and dataset usage easier to record and document would have significant benefits for the ML community: it would allow for greater diversity in datasets by inviting modification to published sources, simplify use of alternative datasets and, in doing so, make results more transparent and robust, while allowing for all contributions to be adequately credited. We present a platform, Renku, designed to support and encourage such sustainable development and use of data, datasets, and code, and we demonstrate its benefits through a few illustrative projects which span the spectrum from dataset creation to dataset consumption and showcasing.
Slimmed Asymmetrical Contrastive Learning and Cross Distillation for Lightweight Model Training
Authors: Li Yang, Kyungmin Lee, Jinwoo Shin, Deliang Fan, Jae-sun Seo Jian Meng
Published in: Advances in Neural Information Processing Systems 36  (NeurIPS 2023) (Main Conference Track), 2023

Abstract: Contrastive learning (CL) has been widely investigated with various learning mechanisms and achieves strong capability in learning representations of data in a self-supervised manner using unlabeled data. A common fashion of contrastive learning on this line is employing mega-sized encoders to achieve comparable performance as the supervised learning counterpart. Despite the success of the labelless training, current contrastive learning algorithms *failed* to achieve good performance with lightweight (compact) models, e.g., MobileNet, while the requirements of the heavy encoders impede the energy-efficient computation, especially for resource-constrained AI applications. Motivated by this, we propose a new self-supervised CL scheme, named SACL-XD, consisting of two technical components, **S**limmed **A**symmetrical **C**ontrastive **L**earning (SACL) and **Cross**-**D**istillation (XD), which collectively enable efficient CL with compact models. While relevant prior works employed a strong pre-trained model as the teacher of unsupervised knowledge distillation to a lightweight encoder, our proposed method trains CL models from scratch and outperforms them even without such an expensive requirement. Compared to the SoTA lightweight CL training (distillation) algorithms, SACL-XD achieves 1.79% ImageNet-1K accuracy improvement on MobileNet-V3 with 64$\times$ training FLOPs reduction.
Beyond Unimodal: Generalising Neural Processes for Multimodal Uncertainty Estimation
Authors: He Zhao, Joanna Dipnall, Lan Du Myong Chol Jung
Published in: Advances in Neural Information Processing Systems 36  (NeurIPS 2023) (Main Conference Track), 2023

Abstract: Uncertainty estimation is an important research area to make deep neural networks (DNNs) more trustworthy. While extensive research on uncertainty estimation has been conducted with unimodal data, uncertainty estimation for multimodal data remains a challenge. Neural processes (NPs) have been demonstrated to be an effective uncertainty estimation method for unimodal data by providing the reliability of Gaussian processes with efficient and powerful DNNs. While NPs hold significant potential for multimodal uncertainty estimation, the adaptation of NPs for multimodal data has not been carefully studied. To bridge this gap, we propose Multimodal Neural Processes (MNPs) by generalising NPs for multimodal uncertainty estimation. Based on the framework of NPs, MNPs consist of several novel and principled mechanisms tailored to the characteristics of multimodal data. In extensive empirical evaluation, our method achieves state-of-the-art multimodal uncertainty estimation performance, showing its appealing robustness against noisy samples and reliability in out-of-distribution detection with faster computation time compared to the current state-of-the-art multimodal uncertainty estimation method.
Trans-Dimensional Generative Modeling via Jump Diffusion Models
Authors: William Harvey, Christian Weilbach, Valentin De Bortoli, Thomas Rainforth, Arnaud Doucet Andrew Campbell
Published in: Advances in Neural Information Processing Systems 36  (NeurIPS 2023) (Main Conference Track), 2023

Abstract: We propose a new class of generative model that naturally handles data of varying dimensionality by jointly modeling the state and dimension of each datapoint. The generative process is formulated as a jump diffusion process that makes jumps between different dimensional spaces. We first define a dimension destroying forward noising process, before deriving the dimension creating time-reversed generative process along with a novel evidence lower bound training objective for learning to approximate it.Simulating our learned approximation to the time-reversed generative process then provides an effective way of sampling data of varying dimensionality by jointly generating state values and dimensions. We demonstrate our approach on molecular and video datasets of varying dimensionality, reporting better compatibility with test-time diffusion guidance imputation tasks and improved interpolation capabilities versus fixed dimensional models that generate state values and dimensions separately.
Plug-and-Play Stability for Intracortical Brain-Computer Interfaces: A One-Year Demonstration of Seamless Brain-to-Text Communication
Authors: Nick Hahn, Foram Kamdar, Donald Avansino, Guy Wilson, Leigh Hochberg, Krishna V Shenoy, Jaimie Henderson, Francis Willett Chaofei Fan
Published in: Advances in Neural Information Processing Systems 36  (NeurIPS 2023) (Main Conference Track), 2023

Abstract: Intracortical brain-computer interfaces (iBCIs) have shown promise for restoring rapid communication to people with neurological disorders such as amyotrophic lateral sclerosis (ALS). However, to maintain high performance over time, iBCIs typically need frequent recalibration to combat changes in the neural recordings that accrue over days. This requires iBCI users to stop using the iBCI and engage in supervised data collection, making the iBCI system hard to use. In this paper, we propose a method that enables self-recalibration of communication iBCIs without interrupting the user. Our method leverages large language models (LMs) to automatically correct errors in iBCI outputs. The self-recalibration process uses these corrected outputs ("pseudo-labels") to continually update the iBCI decoder online. Over a period of more than one year (403 days), we evaluated our Continual Online Recalibration with Pseudo-labels (CORP) framework with one clinical trial participant. CORP achieved  a stable decoding accuracy of 93.84% in an online handwriting iBCI task, significantly outperforming other baseline methods. Notably, this is the longest-running iBCI stability demonstration involving a human participant. Our results provide the first  evidence for long-term stabilization of a plug-and-play, high-performance communication iBCI, addressing a major barrier for the clinical translation of iBCIs.
Towards robust and generalizable representations of extracellular data using contrastive learning
Authors: Charlotte Loh, Akash Srivastava, Liam Paninski, Cole Hurwitz Ankit Vishnubhotla
Published in: Advances in Neural Information Processing Systems 36  (NeurIPS 2023) (Main Conference Track), 2023

Abstract: Contrastive learning is quickly becoming an essential tool in neuroscience for extracting robust and meaningful representations of neural activity. Despite numerous applications to neuronal population data, there has been little exploration of how these methods can be adapted to key primary data analysis tasks such as spike sorting or cell-type classification. In this work, we propose a novel contrastive learning framework, CEED (Contrastive Embeddings for Extracellular Data), for high-density extracellular recordings. We demonstrate that through careful design of the network architecture and data augmentations, it is possible to generically extract representations that far outperform current specialized approaches. We validate our method across multiple high-density extracellular recordings. All code used to run CEED can be found at https://github.com/ankitvishnu23/CEED.
Rethinking Conditional Diffusion Sampling with Progressive Guidance
Authors: Daochang Liu, Chang Xu Anh-Dung Dinh
Published in: Advances in Neural Information Processing Systems 36  (NeurIPS 2023) (Main Conference Track), 2023

Abstract: This paper tackles two critical challenges encountered in classifier guidance for diffusion generative models, i.e., the lack of diversity and the presence of adversarial effects. These issues often result in a scarcity of diverse samples or the generation of non-robust features. The underlying cause lies in the mechanism of classifier guidance, where discriminative gradients push samples to be recognized as conditions aggressively. This inadvertently suppresses information with common features among relevant classes, resulting in a limited pool of features with less diversity or the absence of robust features for image construction.We propose a generalized classifier guidance method called Progressive Guidance, which mitigates the problems by allowing relevant classes' gradients to contribute to shared information construction when the image is noisy in early sampling steps. In the later sampling stage, we progressively enhance gradients to refine the details in the image toward the primary condition. This helps to attain a high level of diversity and robustness compared to the vanilla classifier guidance. Experimental results demonstrate that our proposed method further improves the image quality while offering a significant level of diversity as well as robust features.
State-Action Similarity-Based Representations for Off-Policy Evaluation
Authors: Josiah Hanna Brahma Pavse
Published in: Advances in Neural Information Processing Systems 36  (NeurIPS 2023) (Main Conference Track), 2023

Abstract: In reinforcement learning, off-policy evaluation (OPE) is the problem of estimating the expected return of an evaluation policy given a fixed dataset that was collected by running one or more different policies. One of the more empirically successful algorithms for OPE has been the fitted q-evaluation (FQE) algorithm that uses temporal difference updates to learn an action-value function, which is then used to estimate the expected return of the evaluation policy. Typically, the original fixed dataset is fed directly into FQE to learn the action-value function of the evaluation policy. Instead, in this paper, we seek to enhance the data-efficiency of FQE by first transforming the fixed dataset using a learned encoder, and then feeding the transformed dataset into FQE. To learn such an encoder, we introduce an OPE-tailored state-action behavioral similarity metric, and use this metric and the fixed dataset to  learn an encoder that models this metric. Theoretically, we show that this metric allows us to bound the error in the resulting OPE estimate. Empirically, we show that other state-action similarity metrics lead to representations that cannot represent the action-value function of the evaluation policy, and that our state-action representation method boosts the data-efficiency of FQE and lowers OPE error relative to other OPE-based representation learning methods on challenging OPE tasks. We also empirically show that the learned representations significantly mitigate divergence of FQE under varying distribution shifts. Our code is available here: https://github.com/Badger-RL/ROPE.
Can LLM Already Serve as A Database Interface? A BIg Bench for Large-Scale Database Grounded Text-to-SQLs
Authors: Binyuan Hui, Ge Qu, Jiaxi Yang, Binhua Li, Bowen Li, Bailin Wang, Bowen Qin, Ruiying Geng, Nan Huo, Xuanhe Zhou, Ma Chenhao, Guoliang Li, Kevin Chang, Fei Huang, Reynold Cheng, Yongbin Li Jinyang Li
Published in: Advances in Neural Information Processing Systems 36  (NeurIPS 2023) (Datasets and Benchmarks Track), 2023

Abstract: Text-to-SQL parsing, which aims at converting natural language instructions into executable SQLs, has gained increasing attention in recent years.  In particular, GPT-4 and Claude-2 have shown impressive results in this task. However, most of the prevalent benchmarks, i.e., Spider, and WikiSQL, focus on database schema with few rows of database contents leaving the gap between academic study and real-world applications. To mitigate this gap, we present BIRD, a BIg benchmark for laRge-scale Database grounded in text-to-SQL tasks, containing 12,751 pairs of text-to-SQL data and 95 databases with a total size of 33.4 GB, spanning 37 professional domains. Our emphasis on database values highlights the new challenges of dirty database contents, external knowledge between NL questions and database contents,  and SQL efficiency, particularly in the context of massive databases. To solve these problems, text-to-SQL models must feature database value comprehension in addition to semantic parsing. The experimental results demonstrate the significance of database values in generating accurate text-to-SQLs for big databases. Furthermore, even the most popular and effective text-to-SQL models, i.e. GPT-4, only achieve 54.89% in execution accuracy, which is still far from the human result of 92.96%, proving that challenges still stand. We also provide an efficiency analysis to offer insights into generating text-to-efficient-SQLs that are beneficial to industries. We believe that BIRD will contribute to advancing real-world applications of text-to-SQL research.The leaderboard and source code are available: https://bird-bench.github.io/.
CARE-MI: Chinese Benchmark for Misinformation Evaluation in Maternity and Infant Care
Authors: Liangzhi Li, Wangyue Li, Mingbai Bai, Lu Wei, Bowen Wang, Noa Garcia Tong Xiang
Published in: Advances in Neural Information Processing Systems 36  (NeurIPS 2023) (Datasets and Benchmarks Track), 2023

Abstract: The recent advances in natural language processing (NLP), have led to a new trend of applying large language models (LLMs) to real-world scenarios. While the latest LLMs are astonishingly fluent when interacting with humans, they suffer from the misinformation problem by unintentionally generating factually false statements. This can lead to harmful consequences, especially when produced within sensitive contexts, such as healthcare. Yet few previous works have focused on evaluating misinformation in the long-form (LF) generation of LLMs, especially for knowledge-intensive topics. Moreover, although LLMs have been shown to perform well in different languages, misinformation evaluation has been mostly conducted in English. To this end, we present a benchmark, CARE-MI, for evaluating LLM misinformation in: 1) a sensitive topic, specifically the maternity and infant care domain; and 2) a language other than English, namely Chinese. Most importantly, we provide an innovative paradigm for building LF generation evaluation benchmarks that can be transferred to other knowledge-intensive domains and low-resourced languages. Our proposed benchmark fills the gap between the extensive usage of LLMs and the lack of datasets for assessing the misinformation generated by these models. It contains 1,612 expert-checked questions, accompanied with human-selected references. Using our benchmark, we conduct extensive experiments and found that current Chinese LLMs are far from perfect in the topic of maternity and infant care. In an effort to minimize the reliance on human resources for performance evaluation, we offer off-the-shelf judgment models for automatically assessing the LF output of LLMs given benchmark questions. Moreover, we compare potential solutions for LF generation evaluation and provide insights for building better automated metrics.