Some sources suggest that honey contains amino acids, minerals, and vitamins that help in the absorption of cholesterol and fat, thereby preventing weight gain. Drinking a mixture of honey and warm water as soon as you wake up in the morning on empty stomach is believed to be the most effective way to enjoy these benefits. Another benefit of taking honey in the morning is that it is a natural supplement that can aid in everyday home remedies for ailments like sore throats and sinus trouble.