The contribution limits for a Self-Directed IRA are the same as a standard IRA. If you are under 50 years old, you can contribute up to ,000 per year. If you are 50 or older, you can contribute up to ,000 per year. Contributions for the year prior must be made by the tax filing deadline. In addition to the annual contributions, Self-Directed IRA accountholders may also roll over or transfer funds from another retirement account.