Although they may slightly look the same, corn tortillas are a better choice because they have a more healthy nutritional value than flour tortillas. However, flour tortillas are more versatile when compared to corn tortillas. They can be used to make tacos, burritos, tostada, and quesadillas while corn tortillas are best for enchiladas, chips, and flautas. Corn tortillas have more fiber and other vital nutrients and they are lower in fat and calories than flour tortillas.