# Amyloid-Beta Interaction with Mitochondria

Authors: Lucia Pagani; Anne Eckert
Journal: International Journal of Alzheimer's Disease
 (2011)

---

## Abstract

Mitochondrial dysfunction is a hallmark of amyloid-beta(Aβ)-induced neuronal toxicity in Alzheimer's disease (AD). The recent emphasis on the intracellular biology of Aβ and its precursor protein (AβPP) has led researchers to consider the possibility that mitochondria-associated and/or intramitochondrial Aβ may directly cause neurotoxicity. In this paper, we will outline current knowledge of the intracellular localization of both Aβ and AβPP addressing the question of how Aβ can access mitochondria. Moreover, we summarize evidence from AD postmortem brain as well as cellular and animal AD models showing that Aβ triggers mitochondrial dysfunction through a number of pathways such as impairment of oxidative phosphorylation, elevation of reactive oxygen species (ROS) production, alteration of mitochondrial dynamics, and interaction with mitochondrial proteins. In particular, we focus on Aβ interaction with different mitochondrial targets including the outer mitochondrial membrane, intermembrane space, inner mitochondrial membrane, and the matrix. Thus, this paper establishes a modified model of the Alzheimer cascade mitochondrial hypothesis.


---

## Body

## 1. Introduction

Although the hallmark lesions of the disease were described by Alois Alzheimer already in 1906—extracellular amyloid plaques mainly composed of amyloid-beta (Aβ) and intracellular neurofibrillary tangles (NFTs) built up of hyperphosphorylated tau—the molecular mechanisms underlying the disease are still unknown. However, more recently, energy deficiency and mitochondrial dysfunction have been recognized as a prominent, early event in Alzheimer’s disease (AD)    [1–11]. Successful development of Alzheimer cell culture models as well as single, double, and recently triple transgenic mouse models that mimic diverse aspects of the disease facilitated the investigation of pathogenic mechanisms in AD and particularly assisted in an understanding of the interaction of amyloid-beta (Aβ) with mitochondria. Mitochondria were found to be the target both for amyloid precursor protein (APP) that accumulates in the mitochondrial import channels and for Aβ that interacts with several proteins inside mitochondria and leads to mitochondrial dysfunction [12].


## 2. Intracellular Localization of AβPP

Amyloid precursor protein (AβPP) is a type 1 integral 110–130 kDa glycoprotein containing a 40 or 42 amino acid sequence, respectively, called Aβ40 and Aβ42. AβPP is ubiquitously expressed in human tissues and localizes at the plasma membrane as well as in several organelles, such as endoplasmic reticulum (ER), Golgi apparatus, and mitochondria (Figure 1)    [13, 14]. AβPP can undergo two pathways of cleavage by secretases: a nonamyloidogenic pathway and an amyloidogenic pathway. In the nonamyloidogenic pathway, a first cut of AβPP is catalyzed by α-secretase, an enzyme that belongs to the ADAM family of disintegrin and metalloprotease and is particularly present in post-Golgi compartment or at the plasma membrane    [15]. α-secretase cleaves AβPP within the Aβ sequence    [16], forming the small membrane-anchored C83 fragment and sAβPPα. The C83 fragment is subsequently cleaved by γ-secretase, a multimeric complex of presenilin proteins PS1 and PS2, nicastrin, anterior pharynx defective1, and presenilin enhancer 2    [17], to form P3 fragment and AβPP intracellular domain (AICD)    [18, 19]. In the amyloidogenic pathway, AβPP generates Aβ through the activity of β-secretase first and then γ-secretase, especially present in Golgi or in late endosomes following the reuptake from the cell surface. β-secretase whose activity was attributed to BACE    [20] cleaves AβPP at the N-terminal of Aβ sequence forming a 99 amino acid fragment C99 and sAβPPβ. C99 is subsequently cleaved by γ-secretase producing Aβ fragment and AICD [18]. Lipoprotein receptor LRP1 can interact with AβPP (Figure 1), influencing AβPP cleavage pathway: the interaction accelerates endocytosis of the complex AβPP-LRP1 and the adaptor Fe65 via clathrin-coated pits and the delivery to the late endosomal compartments for cleavage by β-secretase, to generate Aβ    [21, 22]; this process can be counteracted by the slower rate of endocytosis LRP1B that sequestrates AβPP at the plasma membrane, increasing α-secretase activity    [23, 24]. SorLA, a further lipoprotein receptor, is also involved in AβPP processing by binding AβPP to the Golgi compartments, impairing the transition to the plasma membrane and blocking β-secretase activity (Figure 1)    [25, 26].Figure 1
Intracellular localization of AβPP and Aβ. AβPP is synthesised in the endoplasmic reticulum (ER) and is trafficked through Golgi network (G), to the cell surface or to mitochondria (Mt). In the plasma membrane the apolipoprotein (Apo) receptor LRP1 forms a complex with AβPP, inducing the internalization of the amyloid precursor protein, together with other plasma membrane enzymes, such as the β-secretase BACE and the γ-secretase presenilin (PS): Aβ is produced through amyloidogenic cleavage of AβPP. The plasma membrane complex AβPP with another Apo receptor, LRP1B, decreases the cellular uptake of AβPP. Sources of mitochondrial Aβ are the endosome (En) but also G and ER. G production of Aβ is decreased by binding of AβPP to another Apo receptor SorLA that blocks AβPP in the early G, counteracting AβPP cleavage pathways. Aβ enters into the mitochondrial matrix through TOM and translocase of the inner membrane (TIM) or is derived from mitochondria-associated AβPP metabolism. N = nucleus, OMM = outer mitochondrial membrane, IMM = inner mitochondrial membrane.With regard to localization of AβPP in mitochondria, recent evidence is provided. Mainly the group of Devi and coworkers    [27] demonstrated that AβPP harbours a chimeric targeting signal consisting of an N-terminal hydrophobic ER followed by a mitochondrial targeting signal. The positively charged residues at 40, 44, and 51 of AβPP are critical components of the mitochondrial targeting signal. In addition, they showed that AβPP formed stable approximately 480 kDa complexes with the translocase of the outer mitochondrial membrane (OMM) 40 (TOM40) import channel and a supercomplex of approximately 620 kDa with both mitochondrial TOM40 and the translocase of the inner mitochondrial membrane 23 (TIM23) import channel TI M23 in an N (in mitochondria)-C (out cytoplasm)" orientation, probably due to a 70 amino acid long acidic domain    [13]. Also in brain tissues of AD affected subjects AβPP localized with mitochondria fraction, associated to TOM40 and TIM23    [27], in a translocation-arrested manner, that may prevent import of de novo synthesised nuclear-encoded mitochondrial protein, such as subunits of the electron transport chain (ETC)    [27]. Nevertheless, until very recently [12], it was believed that mitochondrial Aβ has to arrive from other sources, since AβPP mitochondrial orientation presents Aβ outside the mitochondria    [27].


## 3. Intracellular Localization of Aβ

In agreement with the intracellular localization of AβPP, cell biological studies have demonstrated that Aβ is generated in the ER, Golgi, and endosomal/lysosomal system (Figure 1). Reports indicate that Aβx-42  (truncated Aβ peptides with “x” generally ranging from 1 and 11) is preferentially generated within the ER, whereas Aβ1–40/42 peptides are predominantly made in the Golgi/trans-Golgi network (TGN) and packaged into post-TGN secretory vesicles    [28, 29]. It is thought that the N-terminal truncation extends to a maximum length around amino acid 11 which renders Aβ even more insoluble, the latter pool of Aβ42 not being secreted [29].Moreover, mitochondrial accumulation of Aβ has been shown in AD patient and AβPP transgenic mouse brain    [4, 28, 30]. In transgenic AβPP mice expressing AβPP V717/F and the AβPP Swedish mutation, mitochondrial Aβ accumulation increased at around 4 months of age, well before the formation of plaques    [30]. In total, these findings are further in line with the recently proposed hypothesis of an intracellular Aβ toxicity cascade which suggests that the toxic Aβ species intervening in molecular and biochemical abnormalities may be intracellular soluble aggregates instead of extracellular, insoluble plaques    [4, 31].How can Aβ access mitochondria? On the one hand, Aβ accumulation in mitochondria might derive from the ER/Golgi (Figure 1), since inhibition of protein secretion can modulate mitochondrial uptake    [30, 32] or might derive from mitochondria-associated AβPP [12] (Figure 1). It has been hypothesized that oligomeric Aβ, with its sharp morphology in contrast to monomeric Aβ, has the ability to permeabilize cellular membranes and lipid bilayers thereby entering organelles such as mitochondria    [33, 34]. Of note, already early reports about the action of aggregated Aβ on membranes implicated increased membrane permeability elicited by fibrils    [35, 36]. These mechanisms might explain why aggregated Aβ preparations elicit effects on mitochondrial function, but not disaggregated Aβ. Recent findings, however, indicate a specific uptake mechanism for Aβ by mitochondria rather than simply being adsorbed to the external surface of mitochondria    [37, 38]. In this model, Aβ is taken up by mitochondria via the TOM complex. On the other hand, a new mechanistic view of mitochondria-related AβPP metabolism was suggested very recently indicating that AICD, P3 peptide, and potentially Aβ are produced locally at the mitochondria. Hereby, mitochondrial AβPP is cleaved by Omi in the intermembrane space and a concerted action of cytosolic α/β and mitochondrial γ-secretases [12].


## 4. Mitochondria

Mitochondria are dynamic ATP-generating organelles which contribute to many cellular functions including intracellular calcium regulation, alteration of reduction-oxidation potential of cells, free radical scavenging, and activation of caspase-mediated cell death. ATP generation is accomplished through oxidative phosphorylation    [7, 39–42]. ATP is subsequently used for a large repertoire of functions like intracellular calcium homeostasis, neurotransmitter production, and synaptic plasticity. Mitochondrial number is indeed very high in neurons, and mitochondria are especially enriched in synapses. Due to the limited glycolytic capacity of neurons, these cells are highly dependent on mitochondria function for energy production [43]. However, as the Pandora’s Box, mitochondria are full of potentially harmful proteins and biochemical reaction centres. They may liberate reactive oxygen species (ROS) and free radicals. Thus, mitochondria are the major producers of ROS and at the same time major targets of ROS toxicity.Mitochondria are composed of a double lipid membrane which structures four compartments, distinct by composition and function. The porous outer membrane (OMM) encompasses the whole organelle. It contains many proteins like import complexes and voltage-dependent anion channels (VDAC) responsible for the free passage of low molecular weight substances (up to 5000 Da) between the cytoplasm and the intermembrane space (IMS) (Figures1 and 2) which represents a reservoir of protons establishing a proton electrochemical gradient across IMM that is needed for the production of ATP via ATPase (complex V). IMS contains proapoptotic proteins like cytochrome c, Smac/Diablo, EndoG, and Htra2/Omi. In contrast to the permeable OMM, the inner mitochondrial membrane (IMM), rich in cardiolipin, provides a highly efficient barrier to the flow of small molecules and ions, including protons. This membrane is invaginated into numerous cristae increasing cell surface area. It houses the respiratory enzymes of the electron transport chain (ETC), the cofactor coenzyme Q, and many mitochondrial carriers. In the matrix, different metabolic pathways take place including the tricarboxylic (TCA or Krebs) cycle (Figure 2).Figure 2
Mitochondrial targets of Aβ. Aβ associated with mitochondria may be deposited at several locations. Although not present exclusively on the outer mitochondrial membrane, Aβ that might be present at that site might influence the interaction of multiple cytosolic proteins (including those of the bcl2 family) with mitochondria, as well as affect the receptor binding of cargo targeted for import into the organelle via the TOM import machinery impeding mitochondrial entry to neosynthesised nuclear-encoded proteins such as subunits of the electron transport chain (ETC) complex IV (CIV). In the intramembrane space, Aβ might affect the functions of both the inner and outer mitochondrial membrane by multiple mechanisms including modulating their permeability. In the mitochondrial matrix, Aβ might interact with important components of metabolic or antioxidant mechanisms. The interaction of Aβ with the inner mitochondrial membrane would bring it into contact with respiratory chain complexes with the potential for myriad effects on cellular metabolism. Thus, Aβ affects the activity of several enzymes, such as pyruvate dehydrogenase (PDH) and α-ketoglutarate dehydrogenase (α-KGDH), decreasing NADH reduction, and the ETC enzyme CIV, reducing the amount of hydrogen that is translocated from the matrix to the intermembrane space, thus impairing the mitochondrial membrane potential (MMP). The dysfunction of the ETC leads to a decreased CV activity and so to a lower ATP synthesis, in addition to increasing reactive oxygen species (ROS) production. ROS negatively influences presequence P (PreP) activity, blocking Aβ degradation, exacerbating mitochondrial Aβ presence. Moreover, ROS induce peroxidation of several mitochondrial macromolecules, such as mitochondrial DNA (mtDNA) and mitochondrial lipids, additionally impairing mitochondrial function. Aβ binds NAD+ pocket in ABAD, blocking its activity and inducing further ROS production. Aβ also influences mitochondrial dynamic, by improving Fis1 presence and activity, thus increasing mitochondrial fragmentation (fission protein: Fis1; fusion proteins: Mfn1/2 and OPA1). Furthermore, Aβ binding to cyclophilin D (CypD) enhances the protein translocation to the inner membrane, favouring the opening of the mitochondrial permeability transition pore, formed by ANT and VDAC. Calcium storage in mitochondria is impaired, altering neuronal function; calcium is exported to the cytosol, as well as other apoptotic factors (ProAp) such as cytochrome c, apoptosis-inducing factor, Smac/DIABLO, endonuclease G, and procaspases, activating cellular apoptosis. IMM: inner mitochondrial membrane, IMS: intermembrane space, OMM: outer mitochondrial membrane.Mitochondria generate energy by two closely coordinated metabolic processes: TCA and the oxidative phosphorylation (OXPHOS) (Figure2). OXPHOS is made up of the ETC assembled in four enzymes (complex I to IV) as well as the F1F0-ATP synthase (complex V). Complex I, III, and IV are located in IMM as integral proteins whereas complex II is attached to the inner surface of IMM. These five enzymes are connected functionally by mobile electron acceptors and donors: ubiquinone and cytochrome c. Electrons from NADH and FADH2 are fed into complex I and II, respectively. Ubiquinone Q carries electrons from both complexes to complex II, and cytochrome c does it from complex III to IV reducing molecular oxygen to water (Figure 2). As electrons are transferred along ETC, a fixed number of protons are pumped from the matrix into IMS establishing a electrochemical gradient characterized with a specific electrical potential (mitochondrial membrane potential = MMP: negative inside −150 to −180 mV). The redox energy drives the synthesis of ATP from ADP as protons are transported back from IMS into the matrix via complex V.


## 5. Mitochondrial Targets of Aβ

Growing evidence indicates that Aβ toxicity can be associated with the outer mitochondrial membrane, intermembrane space, inner mitochondrial membrane, and the matrix.


### 5.1. OMM-IMM-IMS

#### 5.1.1. TOM-TIM Import Machinery

A working model postulates that Aβ  and/or AβPP interact with mitochondria by inhibiting protein import    [13, 44]. Import deficits are initially insufficient to impair mitochondrial integrity but over time cause mitochondrial dysfunction and further import deficits. Aβ may inhibit protein import by direct interactions with the import machinery or by indirect mechanisms. Given that multiple mitochondrial activities, including protein import itself, are dependent upon the import of nuclear-encoded proteins, it seems likely that even a modest decline in import could have potentially catastrophic consequences in the long-term. Furthermore, a decline in protein import seems to precede increased ROS and decreased mitochondrial membrane potential suggesting a gradual failure of mitochondria. Indeed, recent data from our group demonstrated mitochondrial dysfunction in a novel triple transgenic mouse model (pR5/AβPP/PS2)—tripleAD mice—that combines both pathologic features of the disease in brain    [1]. Using comparative, quantitative proteomics (iTRAQ) and mass spectroscopy, we found a massive deregulation of 24 proteins, of which one-third were mitochondrial proteins mainly related to complexes I and IV of the oxidative phosphorylation system (OXPHOS). Notably, deregulation of complex I was taudependent, while deregulation of complex IV was Aβ dependent, both at the protein and activity levels. Together, these findings emphasize that Aβ and tau synergistically impair complex I function with aging. Notably, changes in the expression of complex IV subunits seem to be mainly related to Aβ. Indeed, a down regulation of several subunits of complex IV is essentially seen between pR5 and tripleAD mice, but not between AβPP/PS2 and tripleAD mice. Interestingly, all of these deregulated proteins are nuclearencoded in agreement with the assumption of Sirk and coworkers    [44].


#### 5.1.2. Fusion and Fission Proteins

Mitochondria are dynamic organelles, undergoing continual fission, mediated by the protein Fis1 and dynamin-like protein1 (DLP1), and fusion, mediated by OPA1, Mfn1, and Mfn2 [45] (Figure 2). Unbalanced fusion leads to mitochondrial elongation, and unbalanced fission leads to excessive mitochondrial fragmentation, both of which impair the mitochondrial function    [46, 47]. Mitochondrial fusion and fission have a different impact in mitochondria physiology: fission allows mitochondrial renewal, redistribution, and proliferation into synapses maintaining a pool of healthy mitochondria, while fusion facilitates mitochondrial movement and distribution across axons and synapses, suggesting a protective mechanism helping the maintenance of sufficient bioenergetic levels adjusted to situations with high-energy demands    [48–50].Several findings indicate that mitochondrial Aβ might play a role in impaired mitochondrial dynamics    [6]. It could be demonstrated that neuroblastoma cells overexpressing human AβPP bearing the Swedish double mutation (AβPPsw) showed a higher percentage of highly fragmented and slower mitochondria compared to control cells. Moreover, MMP and ATP produced by mitochondria were reduced in AβPPsw cells compared to control cells, suggesting vice versa a direct effect of mitochondrial dynamic on the function of the organelle. In particular, proteins involved in mitochondrial dynamics were present at different levels in AβPPsw cells compared to control cells. Thus, in AβPPsw cells, the balance between mitochondrial fusion and fission was shifted to enhanced fission which was accompanied by increased protein levels of fission proteins such as Fis-1 and reduced levels of fusion proteins like OPA1 and DLP-1. In agreement with these in vitro findings, an abnormal distribution of mitochondria was also found in pyramidal neurons of AD-affected individuals    [51–53].Altered mitochondrial dynamics might be due to enhanced nitrosative stress generated by Aβ, such as S-nitrosylation of DLP1. This modification can disturb the balance between fission and fusion of mitochondria in favour of mitochondrial fission followed by mitochondrial depletion from axons and dendrites and subsequently synaptic loss    [54, 55].


### 5.2. IMM

#### 5.2.1. ETC: OXPHOS, ATP, and ROS

Early energy dysfunction characterized by a decreased mitochondrial membrane potential, ATP level, and complex IV activity has been reported for 3- and 6-month-old AβPP transgenic mice (AβPP; Swedish (KM670/671NL) and London (V717I) mutation)    [3]. These mice showed also increased levels of 4-hydroxynonenal (HNE), a marker of lipid oxidation, and reduced activity of Cu/Zn superoxide dismutase (SOD)    [56]. Interestingly, mitochondrial defects such as the decrease of complex IV activity in 3-month-old AβPP transgenic mice were already observed in the absence of plaques, but in the presence of increased Aβ levels in brain    [3, 57]. Furthermore, an age-dependent impairment of oxygen consumption such as a decrease of state 3 and uncoupled respiration were observed in AβPP transgenic mice compared to age-matched controls    [3, 30, 58]. In addition, AβPP/PS1 transgenic mice, which in contrast to AβPP transgenic mice exhibit Aβ plaques already at an age of 3 months, presented stronger reductions in mitochondrial membrane potential and ATP levels compared to age-matched AβPP transgenic mice. Consequently, Aβ-dependent mitochondrial dysfunction starts already at a very young age and accelerates substantially with increasing age as does Aβ plaque load [59].The development of sophisticated proteomic methods allowed the examination of synaptosomal fractions from AβPP transgenic mice (Tg2576) and revealed a massive neuronal decay and synapse loss as the final consequence from all pathological changes occurring in AD [18]. Additional studies revealed significant differences in mitochondrial hsp70 and protein subunit composition of respiratory chain complexes I and III in this transgenic mouse model [58].In a newtripleAD (pR5/AβPP/PS2) mouse model, we showed first of all that Aβ and tau act synergistically in amplifying mitochondrial respiratory deficits, mainly of complex I and IV activities. Thereby, hyperphosphorylated tau may drive a vicious cycle within the Aβ cascade. Remarkably, deregulation of complex I was related to tau, whereas deregulation of complex IV was Aβ dependent, both at the protein and activity levels. The synergistic effects of Aß and tau led already at the age of 8 months to a depolarized mitochondrial membrane potential in the tripleAD mice. Additionally, we found that age-related oxidative stress at 12 months of age may exaggerate the dysfunctional energy homeostasis and synthesis of ATP and, in turn, take part in the vicious cycle that finally leads to cell death    [60]. Our data complement those obtained in another triple transgenic mouse model 3xTg-AD (P301Ltau/AβPP/PS1)    [61]. Yao and colleagues described age-related bioenergetic deficits in female 3xTg-AD mice aged from 3 to 12 months    [62]. They found a decreased activity of regulatory enzymes of the OXPHOS (pyruvate dehydrogenase (PDH) and cytochrome c oxidase (COX)) and increased oxidative stress and lipid peroxidation. Most of the effects on mitochondria were seen at the age of 9 months, whereas mitochondrial respiration was significantly decreased with 12 months of age. Importantly, mitochondrial bioenergetic deficits precede the development of AD pathology in the 3xTg-AD mice.


#### 5.2.2. Cyclophilin D

Mitochondrial Aβ may interact with Cyclophilin D (CypD), an integral part of the mitochondrial permeability transition pore (mPTP) which potentiates free radical production, causes synaptic failure, and promotes the opening of the mPTP leading to apoptosis    [63].CypD, a peptidylprolyl isomerase F, normally resides in mitochondrial matrix and is involved in apoptosis and necrosis. It has been demonstrated that CypD is able to form complexes with Aβ within mitochondria of cortical neurons from APP transgenic mice, increasing the translocation of CypD from the matrix to the inner membrane (Figure 2) [64]. The translocation of CypD represents a first step in the opening of mPTP and involves the binding of CypD with adenine nucleotide translocase    [65–69]. mPTP opening can lead to matrix swelling, dissipation of the inner membrane potential, and generation of ROS, with subsequent rupture of the outer membrane and a nonspecific release of intermembrane space proteins into the cytosol, such as cytochrome c, apoptosis-inducing factor, Smac/DIABLO, endonuclease G, and procaspases, that will activate several signal transduction pathways such as apoptosis    [70–75]. Furthermore, in AβPP transgenic mice the abrogation of CypD was able to attenuate Aβ-mediated abnormal mitochondrial dysfunction, such as calcium-induced mitochondrial swelling, lowered mitochondrial calcium uptake capacity, and impaired mitochondrial respiratory function [64]. Moreover, a correlation was found between levels of CypD in mitochondria and resistance to the opening of mPTP induced by calcium    [76, 77], further supporting an active role of CypD in neuronal loss caused by Aβ.


### 5.3. Matrix

#### 5.3.1. The Tricarboxylic Acid Cycle (TCA or Krebs Cycle)

Impairment in the activity and levels of several mitochondria enzymes involved in the Krebs cycle was reported since the early 80’s (Figure2). Perry and colleagues observed a reduction in pyruvate dehydrogenase (PDH), ATP-citrate lyase, and acetoacetyl-CoA thiolase in postmortem brain tissues of AD-affected subjects and correlated the decrease of these enzymes to the decreased production of acetylcoenzyme A and cholinergic defects that are observed in AD [78]. A frontal cortex deficiency in PDH activity was also observed in another cohort of brain tissues from AD patients [79]. Moreover, a reduced activity of thiamine-pyrophosphate-dependent enzymes, such as α-ketoglutarate dehydrogenase (KGDH), was observed in brain tissues    [80, 81] as well as in peripheral cells from AD subjects    [81, 82]. The brain’s reduction in α-ketoglutarate dehydrogenase presence and activity was region specific and observed mainly in temporal cortex, parietal cortex, and hippocampus [83]. Very interestingly, the loss of α-ketoglutarate-dehydrogenase-positive neurons could be correlated to the total loss of neurons, suggesting a possible reason for the selective vulnerability in AD brain    [84]. In the central nervous system, the high metabolic demand can lead to a higher level of oxidative stress via the production of free radicals. KGDH is sensitive to a wide range of oxidants. Under pathological conditions, Aβ further increases oxidative stress leading directly or indirectly to a decline in the activity of KGDH    [85, 86].


#### 5.3.2. ABAD

The involvement of mitochondria in the pathogenic pathway of Aβ was confirmed by specific binding of Aβ and AβPP to mitochondrial proteins which causes energy impairment and cell physiology defects. Firstly, Aβ specifically binds to the mitochondrial Aβ-binding alcohol dehydrogenase (ABAD)    [4], a mitochondrial matrix protein which is upregulated in the temporal lobe of AD patients as well as in AβPP transgenic mice    [87–89]. The Aβ-ABAD interaction caused elevated reactive oxygen species (ROS) production and cell death as well as spatial learning and memory deficits in 5-month-old AβPP/ABAD double-transgenic mice. The investigation of the crystal structure of ABAD-Aβ demonstrated that the formation of the complex prevents the binding of NAD+ to ABAD, thereby changing mitochondrial membrane permeability    [90] and reducing the activities of respiratory enzymes    [4] which then may lead to mitochondrial failure. ABAD, a member of the short-chain dehydrogenase/reductase family, shows enzymatic activity toward a broad array of substrates including n-isopropanol and beta-estradiol. Thus, ABAD is important for mitochondrial function via facilitation of ketone body utilization by promoting the generation of acetyl-CoA to feed into the TCA cycle, an effect that is particularly important in situations of stress.


#### 5.3.3. mtDNA

Some of the alterations that are found in mitochondrial function in AD have been attributed to mutations of mtDNA    [91]. Although most mitochondrial proteins are encoded by the nuclear genome, mitochondria contain many copies of their own DNA that encodes for 13 polypeptide complexes of the respiratory chain. The increased number of mtDNA mutations can be explained by the proximity of mtDNA to oxidative stress generated by the respiratory chain itself, the lack of mtDNA to any protective histone covering, and a deficient repair mechanism compared to nuclear DNA. Therefore, mitochondria themselves are extremely sensitive to oxidative stress. For instance, mtDNA np4336 mutation in the tRNAGln gene was reported in sporadic AD patients    [91–95]. In addition, it was shown that AD brains exhibited a striking increase in a 1,112-np mtDNA control region, an element known to be involved in mtDNA transcription and/or replication [96]; mutations in this region may be responsible for a decreased number of mitochondria. In the light of these data, a mitochondria cascade hypothesis was developed to explain the prevalence of AD by hypothesising that the pathology will easily develop when a mitochondria starting line, in conjunction with genetic and environmental factors, exhibits increased mtDNA mutations (Figure 3).Figure 3
A hypothetical sequence of the pathogenic steps of the Alzheimer mitochondrial cascade hypothesis. The main cytotoxic pathway of Aβ (red arrows) involves Aβ-induced mitochondrial function, increased ROS production, activation of neurofibrillary tangles (NFT) formation, synaptic failure, and neurodegeneration. Several other pathways feed this cascade via feeding back (black arrows) or forward (dashed arrows) revealing several vicious cycles within a larger vicious cycle. All of them, once set in motion, amplify their own processes, thus accelerating the development of AD.


#### 5.3.4. PreP

Several enzymes were identified to degrade Aβ. Neural endopeptidase (NEP) was shown responsible for the extracellular degradation of Aβ [97], while the two members of the pitrilysin oligopeptidase family, human insulin degrading enzyme (IDE) and presequence protease (PreP), are responsible for the intracellular degradation of Aβ. PreP is a metalloprotease containing an inverted zinc-binding motif and was first identified in Arabidopsis thaliana as the enzyme responsible for mitochondrial degradation of targeting peptides up to 65 amino acids    [98–100]. Intramitochondrial localization studies demonstrated PreP to be localized within the mitochondrial matrix    [101, 102]. In case, Aβ reaches the matrix, it can be degraded by PreP (Figure 2). Two highly conserved cysteines (Cys527 and Cys90) are able to form a disulphide bridge in oxidizing condition, locking PreP in an inactive form. Since oxidizing conditions are present with high amount of Aβ in mitochondria, this may prevent the clearance of Aβ (Figure 2), exacerbating mitochondrial dysfunctions by accelerating its interactions with CypD and/or ABAD [37].


## 5.1. OMM-IMM-IMS

### 5.1.1. TOM-TIM Import Machinery

A working model postulates that Aβ  and/or AβPP interact with mitochondria by inhibiting protein import    [13, 44]. Import deficits are initially insufficient to impair mitochondrial integrity but over time cause mitochondrial dysfunction and further import deficits. Aβ may inhibit protein import by direct interactions with the import machinery or by indirect mechanisms. Given that multiple mitochondrial activities, including protein import itself, are dependent upon the import of nuclear-encoded proteins, it seems likely that even a modest decline in import could have potentially catastrophic consequences in the long-term. Furthermore, a decline in protein import seems to precede increased ROS and decreased mitochondrial membrane potential suggesting a gradual failure of mitochondria. Indeed, recent data from our group demonstrated mitochondrial dysfunction in a novel triple transgenic mouse model (pR5/AβPP/PS2)—tripleAD mice—that combines both pathologic features of the disease in brain    [1]. Using comparative, quantitative proteomics (iTRAQ) and mass spectroscopy, we found a massive deregulation of 24 proteins, of which one-third were mitochondrial proteins mainly related to complexes I and IV of the oxidative phosphorylation system (OXPHOS). Notably, deregulation of complex I was taudependent, while deregulation of complex IV was Aβ dependent, both at the protein and activity levels. Together, these findings emphasize that Aβ and tau synergistically impair complex I function with aging. Notably, changes in the expression of complex IV subunits seem to be mainly related to Aβ. Indeed, a down regulation of several subunits of complex IV is essentially seen between pR5 and tripleAD mice, but not between AβPP/PS2 and tripleAD mice. Interestingly, all of these deregulated proteins are nuclearencoded in agreement with the assumption of Sirk and coworkers    [44].


### 5.1.2. Fusion and Fission Proteins

Mitochondria are dynamic organelles, undergoing continual fission, mediated by the protein Fis1 and dynamin-like protein1 (DLP1), and fusion, mediated by OPA1, Mfn1, and Mfn2 [45] (Figure 2). Unbalanced fusion leads to mitochondrial elongation, and unbalanced fission leads to excessive mitochondrial fragmentation, both of which impair the mitochondrial function    [46, 47]. Mitochondrial fusion and fission have a different impact in mitochondria physiology: fission allows mitochondrial renewal, redistribution, and proliferation into synapses maintaining a pool of healthy mitochondria, while fusion facilitates mitochondrial movement and distribution across axons and synapses, suggesting a protective mechanism helping the maintenance of sufficient bioenergetic levels adjusted to situations with high-energy demands    [48–50].Several findings indicate that mitochondrial Aβ might play a role in impaired mitochondrial dynamics    [6]. It could be demonstrated that neuroblastoma cells overexpressing human AβPP bearing the Swedish double mutation (AβPPsw) showed a higher percentage of highly fragmented and slower mitochondria compared to control cells. Moreover, MMP and ATP produced by mitochondria were reduced in AβPPsw cells compared to control cells, suggesting vice versa a direct effect of mitochondrial dynamic on the function of the organelle. In particular, proteins involved in mitochondrial dynamics were present at different levels in AβPPsw cells compared to control cells. Thus, in AβPPsw cells, the balance between mitochondrial fusion and fission was shifted to enhanced fission which was accompanied by increased protein levels of fission proteins such as Fis-1 and reduced levels of fusion proteins like OPA1 and DLP-1. In agreement with these in vitro findings, an abnormal distribution of mitochondria was also found in pyramidal neurons of AD-affected individuals    [51–53].Altered mitochondrial dynamics might be due to enhanced nitrosative stress generated by Aβ, such as S-nitrosylation of DLP1. This modification can disturb the balance between fission and fusion of mitochondria in favour of mitochondrial fission followed by mitochondrial depletion from axons and dendrites and subsequently synaptic loss    [54, 55].


## 5.1.1. TOM-TIM Import Machinery

A working model postulates that Aβ  and/or AβPP interact with mitochondria by inhibiting protein import    [13, 44]. Import deficits are initially insufficient to impair mitochondrial integrity but over time cause mitochondrial dysfunction and further import deficits. Aβ may inhibit protein import by direct interactions with the import machinery or by indirect mechanisms. Given that multiple mitochondrial activities, including protein import itself, are dependent upon the import of nuclear-encoded proteins, it seems likely that even a modest decline in import could have potentially catastrophic consequences in the long-term. Furthermore, a decline in protein import seems to precede increased ROS and decreased mitochondrial membrane potential suggesting a gradual failure of mitochondria. Indeed, recent data from our group demonstrated mitochondrial dysfunction in a novel triple transgenic mouse model (pR5/AβPP/PS2)—tripleAD mice—that combines both pathologic features of the disease in brain    [1]. Using comparative, quantitative proteomics (iTRAQ) and mass spectroscopy, we found a massive deregulation of 24 proteins, of which one-third were mitochondrial proteins mainly related to complexes I and IV of the oxidative phosphorylation system (OXPHOS). Notably, deregulation of complex I was taudependent, while deregulation of complex IV was Aβ dependent, both at the protein and activity levels. Together, these findings emphasize that Aβ and tau synergistically impair complex I function with aging. Notably, changes in the expression of complex IV subunits seem to be mainly related to Aβ. Indeed, a down regulation of several subunits of complex IV is essentially seen between pR5 and tripleAD mice, but not between AβPP/PS2 and tripleAD mice. Interestingly, all of these deregulated proteins are nuclearencoded in agreement with the assumption of Sirk and coworkers    [44].


## 5.1.2. Fusion and Fission Proteins

Mitochondria are dynamic organelles, undergoing continual fission, mediated by the protein Fis1 and dynamin-like protein1 (DLP1), and fusion, mediated by OPA1, Mfn1, and Mfn2 [45] (Figure 2). Unbalanced fusion leads to mitochondrial elongation, and unbalanced fission leads to excessive mitochondrial fragmentation, both of which impair the mitochondrial function    [46, 47]. Mitochondrial fusion and fission have a different impact in mitochondria physiology: fission allows mitochondrial renewal, redistribution, and proliferation into synapses maintaining a pool of healthy mitochondria, while fusion facilitates mitochondrial movement and distribution across axons and synapses, suggesting a protective mechanism helping the maintenance of sufficient bioenergetic levels adjusted to situations with high-energy demands    [48–50].Several findings indicate that mitochondrial Aβ might play a role in impaired mitochondrial dynamics    [6]. It could be demonstrated that neuroblastoma cells overexpressing human AβPP bearing the Swedish double mutation (AβPPsw) showed a higher percentage of highly fragmented and slower mitochondria compared to control cells. Moreover, MMP and ATP produced by mitochondria were reduced in AβPPsw cells compared to control cells, suggesting vice versa a direct effect of mitochondrial dynamic on the function of the organelle. In particular, proteins involved in mitochondrial dynamics were present at different levels in AβPPsw cells compared to control cells. Thus, in AβPPsw cells, the balance between mitochondrial fusion and fission was shifted to enhanced fission which was accompanied by increased protein levels of fission proteins such as Fis-1 and reduced levels of fusion proteins like OPA1 and DLP-1. In agreement with these in vitro findings, an abnormal distribution of mitochondria was also found in pyramidal neurons of AD-affected individuals    [51–53].Altered mitochondrial dynamics might be due to enhanced nitrosative stress generated by Aβ, such as S-nitrosylation of DLP1. This modification can disturb the balance between fission and fusion of mitochondria in favour of mitochondrial fission followed by mitochondrial depletion from axons and dendrites and subsequently synaptic loss    [54, 55].


## 5.2. IMM

### 5.2.1. ETC: OXPHOS, ATP, and ROS

Early energy dysfunction characterized by a decreased mitochondrial membrane potential, ATP level, and complex IV activity has been reported for 3- and 6-month-old AβPP transgenic mice (AβPP; Swedish (KM670/671NL) and London (V717I) mutation)    [3]. These mice showed also increased levels of 4-hydroxynonenal (HNE), a marker of lipid oxidation, and reduced activity of Cu/Zn superoxide dismutase (SOD)    [56]. Interestingly, mitochondrial defects such as the decrease of complex IV activity in 3-month-old AβPP transgenic mice were already observed in the absence of plaques, but in the presence of increased Aβ levels in brain    [3, 57]. Furthermore, an age-dependent impairment of oxygen consumption such as a decrease of state 3 and uncoupled respiration were observed in AβPP transgenic mice compared to age-matched controls    [3, 30, 58]. In addition, AβPP/PS1 transgenic mice, which in contrast to AβPP transgenic mice exhibit Aβ plaques already at an age of 3 months, presented stronger reductions in mitochondrial membrane potential and ATP levels compared to age-matched AβPP transgenic mice. Consequently, Aβ-dependent mitochondrial dysfunction starts already at a very young age and accelerates substantially with increasing age as does Aβ plaque load [59].The development of sophisticated proteomic methods allowed the examination of synaptosomal fractions from AβPP transgenic mice (Tg2576) and revealed a massive neuronal decay and synapse loss as the final consequence from all pathological changes occurring in AD [18]. Additional studies revealed significant differences in mitochondrial hsp70 and protein subunit composition of respiratory chain complexes I and III in this transgenic mouse model [58].In a newtripleAD (pR5/AβPP/PS2) mouse model, we showed first of all that Aβ and tau act synergistically in amplifying mitochondrial respiratory deficits, mainly of complex I and IV activities. Thereby, hyperphosphorylated tau may drive a vicious cycle within the Aβ cascade. Remarkably, deregulation of complex I was related to tau, whereas deregulation of complex IV was Aβ dependent, both at the protein and activity levels. The synergistic effects of Aß and tau led already at the age of 8 months to a depolarized mitochondrial membrane potential in the tripleAD mice. Additionally, we found that age-related oxidative stress at 12 months of age may exaggerate the dysfunctional energy homeostasis and synthesis of ATP and, in turn, take part in the vicious cycle that finally leads to cell death    [60]. Our data complement those obtained in another triple transgenic mouse model 3xTg-AD (P301Ltau/AβPP/PS1)    [61]. Yao and colleagues described age-related bioenergetic deficits in female 3xTg-AD mice aged from 3 to 12 months    [62]. They found a decreased activity of regulatory enzymes of the OXPHOS (pyruvate dehydrogenase (PDH) and cytochrome c oxidase (COX)) and increased oxidative stress and lipid peroxidation. Most of the effects on mitochondria were seen at the age of 9 months, whereas mitochondrial respiration was significantly decreased with 12 months of age. Importantly, mitochondrial bioenergetic deficits precede the development of AD pathology in the 3xTg-AD mice.


### 5.2.2. Cyclophilin D

Mitochondrial Aβ may interact with Cyclophilin D (CypD), an integral part of the mitochondrial permeability transition pore (mPTP) which potentiates free radical production, causes synaptic failure, and promotes the opening of the mPTP leading to apoptosis    [63].CypD, a peptidylprolyl isomerase F, normally resides in mitochondrial matrix and is involved in apoptosis and necrosis. It has been demonstrated that CypD is able to form complexes with Aβ within mitochondria of cortical neurons from APP transgenic mice, increasing the translocation of CypD from the matrix to the inner membrane (Figure 2) [64]. The translocation of CypD represents a first step in the opening of mPTP and involves the binding of CypD with adenine nucleotide translocase    [65–69]. mPTP opening can lead to matrix swelling, dissipation of the inner membrane potential, and generation of ROS, with subsequent rupture of the outer membrane and a nonspecific release of intermembrane space proteins into the cytosol, such as cytochrome c, apoptosis-inducing factor, Smac/DIABLO, endonuclease G, and procaspases, that will activate several signal transduction pathways such as apoptosis    [70–75]. Furthermore, in AβPP transgenic mice the abrogation of CypD was able to attenuate Aβ-mediated abnormal mitochondrial dysfunction, such as calcium-induced mitochondrial swelling, lowered mitochondrial calcium uptake capacity, and impaired mitochondrial respiratory function [64]. Moreover, a correlation was found between levels of CypD in mitochondria and resistance to the opening of mPTP induced by calcium    [76, 77], further supporting an active role of CypD in neuronal loss caused by Aβ.


## 5.2.1. ETC: OXPHOS, ATP, and ROS

Early energy dysfunction characterized by a decreased mitochondrial membrane potential, ATP level, and complex IV activity has been reported for 3- and 6-month-old AβPP transgenic mice (AβPP; Swedish (KM670/671NL) and London (V717I) mutation)    [3]. These mice showed also increased levels of 4-hydroxynonenal (HNE), a marker of lipid oxidation, and reduced activity of Cu/Zn superoxide dismutase (SOD)    [56]. Interestingly, mitochondrial defects such as the decrease of complex IV activity in 3-month-old AβPP transgenic mice were already observed in the absence of plaques, but in the presence of increased Aβ levels in brain    [3, 57]. Furthermore, an age-dependent impairment of oxygen consumption such as a decrease of state 3 and uncoupled respiration were observed in AβPP transgenic mice compared to age-matched controls    [3, 30, 58]. In addition, AβPP/PS1 transgenic mice, which in contrast to AβPP transgenic mice exhibit Aβ plaques already at an age of 3 months, presented stronger reductions in mitochondrial membrane potential and ATP levels compared to age-matched AβPP transgenic mice. Consequently, Aβ-dependent mitochondrial dysfunction starts already at a very young age and accelerates substantially with increasing age as does Aβ plaque load [59].The development of sophisticated proteomic methods allowed the examination of synaptosomal fractions from AβPP transgenic mice (Tg2576) and revealed a massive neuronal decay and synapse loss as the final consequence from all pathological changes occurring in AD [18]. Additional studies revealed significant differences in mitochondrial hsp70 and protein subunit composition of respiratory chain complexes I and III in this transgenic mouse model [58].In a newtripleAD (pR5/AβPP/PS2) mouse model, we showed first of all that Aβ and tau act synergistically in amplifying mitochondrial respiratory deficits, mainly of complex I and IV activities. Thereby, hyperphosphorylated tau may drive a vicious cycle within the Aβ cascade. Remarkably, deregulation of complex I was related to tau, whereas deregulation of complex IV was Aβ dependent, both at the protein and activity levels. The synergistic effects of Aß and tau led already at the age of 8 months to a depolarized mitochondrial membrane potential in the tripleAD mice. Additionally, we found that age-related oxidative stress at 12 months of age may exaggerate the dysfunctional energy homeostasis and synthesis of ATP and, in turn, take part in the vicious cycle that finally leads to cell death    [60]. Our data complement those obtained in another triple transgenic mouse model 3xTg-AD (P301Ltau/AβPP/PS1)    [61]. Yao and colleagues described age-related bioenergetic deficits in female 3xTg-AD mice aged from 3 to 12 months    [62]. They found a decreased activity of regulatory enzymes of the OXPHOS (pyruvate dehydrogenase (PDH) and cytochrome c oxidase (COX)) and increased oxidative stress and lipid peroxidation. Most of the effects on mitochondria were seen at the age of 9 months, whereas mitochondrial respiration was significantly decreased with 12 months of age. Importantly, mitochondrial bioenergetic deficits precede the development of AD pathology in the 3xTg-AD mice.


## 5.2.2. Cyclophilin D

Mitochondrial Aβ may interact with Cyclophilin D (CypD), an integral part of the mitochondrial permeability transition pore (mPTP) which potentiates free radical production, causes synaptic failure, and promotes the opening of the mPTP leading to apoptosis    [63].CypD, a peptidylprolyl isomerase F, normally resides in mitochondrial matrix and is involved in apoptosis and necrosis. It has been demonstrated that CypD is able to form complexes with Aβ within mitochondria of cortical neurons from APP transgenic mice, increasing the translocation of CypD from the matrix to the inner membrane (Figure 2) [64]. The translocation of CypD represents a first step in the opening of mPTP and involves the binding of CypD with adenine nucleotide translocase    [65–69]. mPTP opening can lead to matrix swelling, dissipation of the inner membrane potential, and generation of ROS, with subsequent rupture of the outer membrane and a nonspecific release of intermembrane space proteins into the cytosol, such as cytochrome c, apoptosis-inducing factor, Smac/DIABLO, endonuclease G, and procaspases, that will activate several signal transduction pathways such as apoptosis    [70–75]. Furthermore, in AβPP transgenic mice the abrogation of CypD was able to attenuate Aβ-mediated abnormal mitochondrial dysfunction, such as calcium-induced mitochondrial swelling, lowered mitochondrial calcium uptake capacity, and impaired mitochondrial respiratory function [64]. Moreover, a correlation was found between levels of CypD in mitochondria and resistance to the opening of mPTP induced by calcium    [76, 77], further supporting an active role of CypD in neuronal loss caused by Aβ.


## 5.3. Matrix

### 5.3.1. The Tricarboxylic Acid Cycle (TCA or Krebs Cycle)

Impairment in the activity and levels of several mitochondria enzymes involved in the Krebs cycle was reported since the early 80’s (Figure2). Perry and colleagues observed a reduction in pyruvate dehydrogenase (PDH), ATP-citrate lyase, and acetoacetyl-CoA thiolase in postmortem brain tissues of AD-affected subjects and correlated the decrease of these enzymes to the decreased production of acetylcoenzyme A and cholinergic defects that are observed in AD [78]. A frontal cortex deficiency in PDH activity was also observed in another cohort of brain tissues from AD patients [79]. Moreover, a reduced activity of thiamine-pyrophosphate-dependent enzymes, such as α-ketoglutarate dehydrogenase (KGDH), was observed in brain tissues    [80, 81] as well as in peripheral cells from AD subjects    [81, 82]. The brain’s reduction in α-ketoglutarate dehydrogenase presence and activity was region specific and observed mainly in temporal cortex, parietal cortex, and hippocampus [83]. Very interestingly, the loss of α-ketoglutarate-dehydrogenase-positive neurons could be correlated to the total loss of neurons, suggesting a possible reason for the selective vulnerability in AD brain    [84]. In the central nervous system, the high metabolic demand can lead to a higher level of oxidative stress via the production of free radicals. KGDH is sensitive to a wide range of oxidants. Under pathological conditions, Aβ further increases oxidative stress leading directly or indirectly to a decline in the activity of KGDH    [85, 86].


### 5.3.2. ABAD

The involvement of mitochondria in the pathogenic pathway of Aβ was confirmed by specific binding of Aβ and AβPP to mitochondrial proteins which causes energy impairment and cell physiology defects. Firstly, Aβ specifically binds to the mitochondrial Aβ-binding alcohol dehydrogenase (ABAD)    [4], a mitochondrial matrix protein which is upregulated in the temporal lobe of AD patients as well as in AβPP transgenic mice    [87–89]. The Aβ-ABAD interaction caused elevated reactive oxygen species (ROS) production and cell death as well as spatial learning and memory deficits in 5-month-old AβPP/ABAD double-transgenic mice. The investigation of the crystal structure of ABAD-Aβ demonstrated that the formation of the complex prevents the binding of NAD+ to ABAD, thereby changing mitochondrial membrane permeability    [90] and reducing the activities of respiratory enzymes    [4] which then may lead to mitochondrial failure. ABAD, a member of the short-chain dehydrogenase/reductase family, shows enzymatic activity toward a broad array of substrates including n-isopropanol and beta-estradiol. Thus, ABAD is important for mitochondrial function via facilitation of ketone body utilization by promoting the generation of acetyl-CoA to feed into the TCA cycle, an effect that is particularly important in situations of stress.


### 5.3.3. mtDNA

Some of the alterations that are found in mitochondrial function in AD have been attributed to mutations of mtDNA    [91]. Although most mitochondrial proteins are encoded by the nuclear genome, mitochondria contain many copies of their own DNA that encodes for 13 polypeptide complexes of the respiratory chain. The increased number of mtDNA mutations can be explained by the proximity of mtDNA to oxidative stress generated by the respiratory chain itself, the lack of mtDNA to any protective histone covering, and a deficient repair mechanism compared to nuclear DNA. Therefore, mitochondria themselves are extremely sensitive to oxidative stress. For instance, mtDNA np4336 mutation in the tRNAGln gene was reported in sporadic AD patients    [91–95]. In addition, it was shown that AD brains exhibited a striking increase in a 1,112-np mtDNA control region, an element known to be involved in mtDNA transcription and/or replication [96]; mutations in this region may be responsible for a decreased number of mitochondria. In the light of these data, a mitochondria cascade hypothesis was developed to explain the prevalence of AD by hypothesising that the pathology will easily develop when a mitochondria starting line, in conjunction with genetic and environmental factors, exhibits increased mtDNA mutations (Figure 3).Figure 3
A hypothetical sequence of the pathogenic steps of the Alzheimer mitochondrial cascade hypothesis. The main cytotoxic pathway of Aβ (red arrows) involves Aβ-induced mitochondrial function, increased ROS production, activation of neurofibrillary tangles (NFT) formation, synaptic failure, and neurodegeneration. Several other pathways feed this cascade via feeding back (black arrows) or forward (dashed arrows) revealing several vicious cycles within a larger vicious cycle. All of them, once set in motion, amplify their own processes, thus accelerating the development of AD.


### 5.3.4. PreP

Several enzymes were identified to degrade Aβ. Neural endopeptidase (NEP) was shown responsible for the extracellular degradation of Aβ [97], while the two members of the pitrilysin oligopeptidase family, human insulin degrading enzyme (IDE) and presequence protease (PreP), are responsible for the intracellular degradation of Aβ. PreP is a metalloprotease containing an inverted zinc-binding motif and was first identified in Arabidopsis thaliana as the enzyme responsible for mitochondrial degradation of targeting peptides up to 65 amino acids    [98–100]. Intramitochondrial localization studies demonstrated PreP to be localized within the mitochondrial matrix    [101, 102]. In case, Aβ reaches the matrix, it can be degraded by PreP (Figure 2). Two highly conserved cysteines (Cys527 and Cys90) are able to form a disulphide bridge in oxidizing condition, locking PreP in an inactive form. Since oxidizing conditions are present with high amount of Aβ in mitochondria, this may prevent the clearance of Aβ (Figure 2), exacerbating mitochondrial dysfunctions by accelerating its interactions with CypD and/or ABAD [37].


## 5.3.1. The Tricarboxylic Acid Cycle (TCA or Krebs Cycle)

Impairment in the activity and levels of several mitochondria enzymes involved in the Krebs cycle was reported since the early 80’s (Figure2). Perry and colleagues observed a reduction in pyruvate dehydrogenase (PDH), ATP-citrate lyase, and acetoacetyl-CoA thiolase in postmortem brain tissues of AD-affected subjects and correlated the decrease of these enzymes to the decreased production of acetylcoenzyme A and cholinergic defects that are observed in AD [78]. A frontal cortex deficiency in PDH activity was also observed in another cohort of brain tissues from AD patients [79]. Moreover, a reduced activity of thiamine-pyrophosphate-dependent enzymes, such as α-ketoglutarate dehydrogenase (KGDH), was observed in brain tissues    [80, 81] as well as in peripheral cells from AD subjects    [81, 82]. The brain’s reduction in α-ketoglutarate dehydrogenase presence and activity was region specific and observed mainly in temporal cortex, parietal cortex, and hippocampus [83]. Very interestingly, the loss of α-ketoglutarate-dehydrogenase-positive neurons could be correlated to the total loss of neurons, suggesting a possible reason for the selective vulnerability in AD brain    [84]. In the central nervous system, the high metabolic demand can lead to a higher level of oxidative stress via the production of free radicals. KGDH is sensitive to a wide range of oxidants. Under pathological conditions, Aβ further increases oxidative stress leading directly or indirectly to a decline in the activity of KGDH    [85, 86].


## 5.3.2. ABAD

The involvement of mitochondria in the pathogenic pathway of Aβ was confirmed by specific binding of Aβ and AβPP to mitochondrial proteins which causes energy impairment and cell physiology defects. Firstly, Aβ specifically binds to the mitochondrial Aβ-binding alcohol dehydrogenase (ABAD)    [4], a mitochondrial matrix protein which is upregulated in the temporal lobe of AD patients as well as in AβPP transgenic mice    [87–89]. The Aβ-ABAD interaction caused elevated reactive oxygen species (ROS) production and cell death as well as spatial learning and memory deficits in 5-month-old AβPP/ABAD double-transgenic mice. The investigation of the crystal structure of ABAD-Aβ demonstrated that the formation of the complex prevents the binding of NAD+ to ABAD, thereby changing mitochondrial membrane permeability    [90] and reducing the activities of respiratory enzymes    [4] which then may lead to mitochondrial failure. ABAD, a member of the short-chain dehydrogenase/reductase family, shows enzymatic activity toward a broad array of substrates including n-isopropanol and beta-estradiol. Thus, ABAD is important for mitochondrial function via facilitation of ketone body utilization by promoting the generation of acetyl-CoA to feed into the TCA cycle, an effect that is particularly important in situations of stress.


## 5.3.3. mtDNA

Some of the alterations that are found in mitochondrial function in AD have been attributed to mutations of mtDNA    [91]. Although most mitochondrial proteins are encoded by the nuclear genome, mitochondria contain many copies of their own DNA that encodes for 13 polypeptide complexes of the respiratory chain. The increased number of mtDNA mutations can be explained by the proximity of mtDNA to oxidative stress generated by the respiratory chain itself, the lack of mtDNA to any protective histone covering, and a deficient repair mechanism compared to nuclear DNA. Therefore, mitochondria themselves are extremely sensitive to oxidative stress. For instance, mtDNA np4336 mutation in the tRNAGln gene was reported in sporadic AD patients    [91–95]. In addition, it was shown that AD brains exhibited a striking increase in a 1,112-np mtDNA control region, an element known to be involved in mtDNA transcription and/or replication [96]; mutations in this region may be responsible for a decreased number of mitochondria. In the light of these data, a mitochondria cascade hypothesis was developed to explain the prevalence of AD by hypothesising that the pathology will easily develop when a mitochondria starting line, in conjunction with genetic and environmental factors, exhibits increased mtDNA mutations (Figure 3).Figure 3
A hypothetical sequence of the pathogenic steps of the Alzheimer mitochondrial cascade hypothesis. The main cytotoxic pathway of Aβ (red arrows) involves Aβ-induced mitochondrial function, increased ROS production, activation of neurofibrillary tangles (NFT) formation, synaptic failure, and neurodegeneration. Several other pathways feed this cascade via feeding back (black arrows) or forward (dashed arrows) revealing several vicious cycles within a larger vicious cycle. All of them, once set in motion, amplify their own processes, thus accelerating the development of AD.


## 5.3.4. PreP

Several enzymes were identified to degrade Aβ. Neural endopeptidase (NEP) was shown responsible for the extracellular degradation of Aβ [97], while the two members of the pitrilysin oligopeptidase family, human insulin degrading enzyme (IDE) and presequence protease (PreP), are responsible for the intracellular degradation of Aβ. PreP is a metalloprotease containing an inverted zinc-binding motif and was first identified in Arabidopsis thaliana as the enzyme responsible for mitochondrial degradation of targeting peptides up to 65 amino acids    [98–100]. Intramitochondrial localization studies demonstrated PreP to be localized within the mitochondrial matrix    [101, 102]. In case, Aβ reaches the matrix, it can be degraded by PreP (Figure 2). Two highly conserved cysteines (Cys527 and Cys90) are able to form a disulphide bridge in oxidizing condition, locking PreP in an inactive form. Since oxidizing conditions are present with high amount of Aβ in mitochondria, this may prevent the clearance of Aβ (Figure 2), exacerbating mitochondrial dysfunctions by accelerating its interactions with CypD and/or ABAD [37].


## 6. Conclusion

Rigorous scientific research has identified multiple mechanisms of Aβ interaction with mitochondria at different mitochondrial compartments: the outer mitochondrial membrane, intermembrane space, inner mitochondrial membrane, and the matrix. With regard to the involvement of Aβ-induced mitochondrial dysfunction in AD pathogenesis, a vicious cycle as well as several vicious circles within the cycle, each accelerating the other, can be drawn emphasizing the Alzheimer mitochondrial cascade hypothesis (Figure 3). AβPP and/or Aβ may block mitochondrial translocation of nuclear-encoded proteins    [27], such as components of the ETC    [103–106], impairing mitochondrial function. Intramitochondrial Aβ is able to perturb mitochondrial function in several ways by directly influencing ETC complex activities    [1], impairing mitochondrial dynamics    [6] or disturbing calcium storage    [107, 108], thus increasing apoptotic pathways [64], as well as via interaction with CypD. Moreover, Aβ interacts with mitochondrial matrix components, such as enzymes of the Krebs cycle    [109] and ABAD    [87, 110], as well as PreP [37]. An improper mitochondrial complex function leads to a decreased mitochondrial membrane potential of the organelle [111], impairing ATP formation    [3, 59, 112–118]. Increased ROS levels act at multiple levels to impair mitochondrial function: they induce mtDNA mutations    [91] that consequently negatively influence mitochondrial function [119], enhance Aβ production by guiding AβPP cleavage pathway toward the amyloidogenesis [120], increase lipid peroxidation    [121, 122], activate mitophagy    [123], leading to a reduced mitochondrial number    [123], and augment tau hyperphosphorylation and NFT formation impairing organelle trafficking and neuronal function finally leading to apoptosis.Finally, the critical role of mitochondria in the early pathogenesis of AD may make them attractive as a preferential target for treatment strategies. Transgenic mice modelling some pathological aspects are hence very valuable in monitoring therapeutic interventions at the mitochondrial level. In agreement, recent data suggest that natural plants such as a standardizedGinkgo bilobaextract or the green tea component epigallocatechin-3-gallate may be promising treatment strategies. Of note, in addition to their antioxidative properties, these compounds stabilize mitochondrial functions such as the mitochondrial membrane potential, ATP levels, and mitochondrial respiratory complexes    [124–127]. Moreover, in APP transgenic mouse models, an antiamyloidogenic effect of these compounds was reported by inhibiting amyloid fibril formation either by a direct interaction with Aβ    [128, 129] or indirectly by reducing ROS levels    [127]. However, the precise actions and, in particular, the mitochondrial targets of these drugs at the molecular level are unclear and need further clarification. In view of the increasing interest in mitochondrial protection as a treatment strategy in dementia, besides strategies with regard to the treatment and/or removal of both Aβ and tau pathology, the findings of a substantial protection of mitochondria against Aβ-induced dysfunction deserve further attention.



---

*Source: 925050-2011-03-15.xml*