# Vaginal Colonization bypapG Allele II+Escherichia coli Isolates from Pregnant and Nonpregnant Women as Predisposing Factor to Pyelonephritis

Authors: Sareaa Maseer Gatya Al-Mayahie
Journal: Infectious Diseases in Obstetrics and Gynecology
 (2013)

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## Abstract

Vaginal (61) and fecal (61)Escherichia coli
isolates from pregnant and nonpregnant women (18–45 years old) were surveyed for
papG alleles by PCR technique. papG allele II was the most prevalent
among both vaginal (32.7%) and fecal (3.2%) isolates, whereas other alleles were found only among vaginal isolates
(1.6% for alleles I and III and 3.2% for alleles II + III). papG+ pregnant women's isolates did
not differ significantly from those of nonpregnant in possession of papG allele II (90% versus 73.3%),
whereas both (32.7%) differed significantly
(P≤0.05) in comparison with fecal isolates (3.2%). The vast majority of papG allele II+ vaginal isolates were clustered in group B2 (81.8%) and much less in group D (18.1%). Also, most of them were positive for fimH (100%), papC (100%), iucC (90.9%), and hly (72.7%), and about half of them were positive for sfa/foc (45.4%). In addition, the mean of VFs' gene possession was 3.5 (range from 2 to 5). It can be concluded that vaginal colonization by papG allele II+E. coli is possibly one of the predisposing factors of both pregnant and nonpregnant women to pyelonephritis, but its potential may be modified by other factors especially host factors.


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## Body

## 1. Introduction

Bacterial adherence is an essential step in all infections which involves surface interactions between specific receptors on the mammalian cell membrane and ligands on the bacterial surface. Tissue specificity of infection is determined significantly by the presence or absence of specific receptors on mammalian cells [1]. The ability of uropathogenic Escherichia coli (UPEC) to adhere to host uroepithelia is an important stage in the successful colonization of the urinary tract and pathogenesis of urinary tract infection (UTI). The principal adherence organelle of UPEC is P fimbriae, which mediates Gal(α1-4)Gal-specific binding via the adhesin molecule PapG [2]. The three molecular variants (I to III) of the adhesin are coded by the adhesin gene papGof which there are three known alleles [3]. These variants exhibit different receptor binding specificities [4]. Naturally, papG alleles occurin four combinations, that is, class Ι plus III, class III only, class II plus III, and class II only [2, 5]. According to the receptor specificity of the PapG adhesin, p-fimbriated uropathogenic E. coli is clinically divided into two subtypes: papG allele II+ strains associated with pyelonephritis and bacteremia, and papG allele III+ strains associated with cystitis but have been found in pyelonephritis and bacteremia [2, 5–7].The most common extraintestinalE. coli infection in healthy women is UTIs [8, 9] which develop in an ascending manner, with E. coligaining access to the bladder via the urethra, and the initial colonization of the vaginal mucosa is considered a critical step toward infection [10–12]. These colonizers of the female introitus predispose the women to recurrent UTI [13]. Acute cystitis is extremely common among reproductive-age women, whereas acute pyelonephritis, while much less common, is associated with high per-episode costs and morbidity [14] and is more common in pregnant women than in nonpregnant women [11]. As vaginal colonization by UPEC is a possible previous step to urinary tract infection, this work was designed to see if there is any difference in papG alleles’ distribution (especially papG allele II) among E. coli vaginal isolates from pregnant and nonpregnant women and also to evaluate the possible ability of papG allele II+ isolates to cause pyelonephritis by genotypic analyses ofE. coli phylogenetic groups and extraintestinal pathogenic E. coli virulence factors (ExPEC VFs). Fecal isolates from pregnant and nonpregnant women were included for comparison.


## 2. Materials and Methods

### 2.1. Bacterial Isolates

This study included 122E. coli isolates (61 vaginal and 61 fecal isolates). Vaginal isolates (23 from pregnant and 38 from nonpregnant women) were recovered as significant growth from high vaginal swabs collected by gynecologists from pregnant and nonpregnant women (aged 18–45 years) clinically diagnosed as having symptomatic genital tract infection, without investigating the exact cause of infection (women with vaginal discomfort, causes of which had not been clarified by gynecological examination). The swabs were streaked immediately after collection on eosine methylene blue agar (EMB) (Himedia) and blood agar plates. The plates were incubated at 37°C for 24–48 hours at ambient air.Fecal isolates (included for comparison) were recovered from healthy volunteers (pregnant (30 isolates) and nonpregnant (31 isolates) women, aged 18–45 years). A single fecal specimen was collected per person. The specimens were processed according to Plos et al. [15] by dilution streaking the fecal material onto EMB. After incubation, from each plate the last three colonies (with the appropriate color and morphology, that is, characteristics of E. coli) at the end of the streak area were selected and subcultured onto EMB plate again, incubated, subcultured again onto tryptic soy agar plates (TSA) (Himedia), and then kept in the refrigerator for further work.All this study-included isolates were collected over a 2-year period from May 2008 to June 2010 at Obstetrics and Gynecology Clinics in Al-Kut/Wasit Province/Iraq, and were identified by conventional biochemical tests [16, 17].


### 2.2. Detection ofpapGAlleles by PCR Technique

All isolates were screened for the presence of the threepapG alleles (I, II, and III) by a multiplex PCR assay using specific primers (Table 1). For template DNA extraction, each isolate was subcultured onto TSA plates for 24 h at 37°C. From the agar plate, 5 colonies were picked and suspended in 100 μL sterile distilled water. Bacterial suspensions were run for 10 min at 94°C [18] in a DNA thermocycler (MultiGene, Labnet International, Inc., USA), and cell debris was removed by centrifugation (12,000 rpm for 1 min). PCR amplification reactions were performed in a volume of 25 μL containing 12.5 μL of KapaTaq 2x Ready Mix (KAPA Biosystems, USA), 20 pmol concentrations of each primer, and 5 μL of DNA template. The cycling parameters [19, 20] were as follows: an initial denaturation at 94°C for 5 min; followed by 26 cycles of 94°C for 1 min, 60°C for 2 min, and 72°C for 3 min; and with a final extension at 72°C for 20 min. The amplified PCR products were subjected to electrophoresis at a 2% agarose gel in 0.5x TBE buffer.Table 1
Nucleotide sequences of PCR primers used to amplifypapG alleles [19].
Gene
Primer sequence (5′-3′)
Ampliconsize (bp)
papG allele I
F
TCGTGCTCAGGTCCGGAATTT
461
R
TGGCATCCCCCAACATTATCG
papG allele II
F
GGGATGAGCGGGCCTTTGAT
190
R
CGGGCCCCCAAGTAACTC
papG allele III
F
GGCCTGCAATGGATTTACCTGG
258
R
CCACCAAATGACCATGCCAGA


### 2.3. Phylogenetic Grouping of the Isolates

Phylogenetic classification ofE. coliisolates was determined using triplex PCR-based phylotyping described by Clermont et al. [21]. Briefly, genomic DNA of bacterial strains was amplified by triplex PCR using primers targeted to three markers, chuA, yjaA, and TspE4.C2. The phylogenetic grouping was made on the basis of the presence of specific PCR-amplified fragments as follows: group B2 (chuA+, yjaA+, TspE.C2±), group D (chuA−, yjaA+, TspE.C2±), group B1 (chuA−, yjaA±, TspEC2+), and group A (chuA−, yjaA±, TspE.C2−) (Table 2).Table 2
Nucleotide sequences of PCR primers used for phylogenetic grouping ofE. coli [21].
Gene
Primer sequence (5′-3′)
Amplicon size (bp)
chuA
F
GACGAACCAACGGTCAGGAT
279
R
TGCCGCCAGTACCAAAGACA
YjaA
F
TGAAGTGTCAGGAGACGCTG
211
R
ATGGAGAATGCGTTCCTCAAC
TspE4.C2
F
GAGTAATGTCGGGGCATTCA
152
R
CGCGCCAACAAAGTATTACG


### 2.4. Genotypic Virulence Characterization of the Isolates

Multiplex PCR was used to detect five genes encoding virulence determinants usually associated with extraintestinal pathogenicE. colistrains (ExPEC VFs): neuC(K1 capsule antigen), hly(alpha-hemolysin), papC(type P pili), sfa/foc(type S pili and type 1C fimbriae), fimH(type 1 pili), and iucC(aerobactin) [2, 7]. Virulence factor genes were amplified with the primers described in Table 3, in a total volume of 50 μL containing 25 μL of KapaTaq 2x Ready Mix (KAPA Biosystems, USA), 20 pmol concentrations of each primer except hly (30 pmol), and 5 μL of DNA template [18]. The reaction conditions were as follows [24]: initial denaturation at 94°C for 4 min followed by 25 cycles of denaturation at 94°C for 30 s, annealing at 63°C for 30 s, and extension at 68°C for 3 min, followed by a final 10 min extension period at 72°C. The amplification products were separated by electrophoresis in a 2% agarose gel containing ethidium bromide. A 100-bp DNA ladder (Kappa Universal) was used in each gel as a molecular size marker.Table 3
Nucleotide sequences of PCR primers used to amplify five ExPEC VFs.
Gene
Primer sequence (5′-3′)
Amplicon size (bp)
Reference
hly
F
AACAAGGATAAGCACTGTTCTGGCT
1,177
[18]
R
ACCATATAAGCGGTCATTCCCGTCA
papC
F
GACGGCTGTACTGCAGGGTGTGGCG
328
[22]
R
ATATCCTTTCTGCAGGGATGCAATA
sfa/foc
F
CTCCGGAGAACTGGGTGCATCTTAC
410
[22]
R
CGGAGGAGTAATTACAAACCTGGCA
iucC
F
AAACCTGGCTTACGCAACTGT
269
[23]
R
ACCCGTCTGCAAATCATGGAT
fimH
F
TGCAGAACGGATAAGCCGTGG
508
[24]
R
GCAGTCACCTGCCCTCCGGTA
hly: alpha-hemolysin; papC: P fimbriae; sfa/foc: S fimbriae and F1C fimbriae; iucC: aerobactin; and fimH: type 1 fimbriae.


### 2.5. Statistical Analysis

The results were analyzed statistically using Chi-square [25]. A P value below 0.05 was considered to indicate statistical significance.


## 2.1. Bacterial Isolates

This study included 122E. coli isolates (61 vaginal and 61 fecal isolates). Vaginal isolates (23 from pregnant and 38 from nonpregnant women) were recovered as significant growth from high vaginal swabs collected by gynecologists from pregnant and nonpregnant women (aged 18–45 years) clinically diagnosed as having symptomatic genital tract infection, without investigating the exact cause of infection (women with vaginal discomfort, causes of which had not been clarified by gynecological examination). The swabs were streaked immediately after collection on eosine methylene blue agar (EMB) (Himedia) and blood agar plates. The plates were incubated at 37°C for 24–48 hours at ambient air.Fecal isolates (included for comparison) were recovered from healthy volunteers (pregnant (30 isolates) and nonpregnant (31 isolates) women, aged 18–45 years). A single fecal specimen was collected per person. The specimens were processed according to Plos et al. [15] by dilution streaking the fecal material onto EMB. After incubation, from each plate the last three colonies (with the appropriate color and morphology, that is, characteristics of E. coli) at the end of the streak area were selected and subcultured onto EMB plate again, incubated, subcultured again onto tryptic soy agar plates (TSA) (Himedia), and then kept in the refrigerator for further work.All this study-included isolates were collected over a 2-year period from May 2008 to June 2010 at Obstetrics and Gynecology Clinics in Al-Kut/Wasit Province/Iraq, and were identified by conventional biochemical tests [16, 17].


## 2.2. Detection ofpapGAlleles by PCR Technique

All isolates were screened for the presence of the threepapG alleles (I, II, and III) by a multiplex PCR assay using specific primers (Table 1). For template DNA extraction, each isolate was subcultured onto TSA plates for 24 h at 37°C. From the agar plate, 5 colonies were picked and suspended in 100 μL sterile distilled water. Bacterial suspensions were run for 10 min at 94°C [18] in a DNA thermocycler (MultiGene, Labnet International, Inc., USA), and cell debris was removed by centrifugation (12,000 rpm for 1 min). PCR amplification reactions were performed in a volume of 25 μL containing 12.5 μL of KapaTaq 2x Ready Mix (KAPA Biosystems, USA), 20 pmol concentrations of each primer, and 5 μL of DNA template. The cycling parameters [19, 20] were as follows: an initial denaturation at 94°C for 5 min; followed by 26 cycles of 94°C for 1 min, 60°C for 2 min, and 72°C for 3 min; and with a final extension at 72°C for 20 min. The amplified PCR products were subjected to electrophoresis at a 2% agarose gel in 0.5x TBE buffer.Table 1
Nucleotide sequences of PCR primers used to amplifypapG alleles [19].
Gene
Primer sequence (5′-3′)
Ampliconsize (bp)
papG allele I
F
TCGTGCTCAGGTCCGGAATTT
461
R
TGGCATCCCCCAACATTATCG
papG allele II
F
GGGATGAGCGGGCCTTTGAT
190
R
CGGGCCCCCAAGTAACTC
papG allele III
F
GGCCTGCAATGGATTTACCTGG
258
R
CCACCAAATGACCATGCCAGA


## 2.3. Phylogenetic Grouping of the Isolates

Phylogenetic classification ofE. coliisolates was determined using triplex PCR-based phylotyping described by Clermont et al. [21]. Briefly, genomic DNA of bacterial strains was amplified by triplex PCR using primers targeted to three markers, chuA, yjaA, and TspE4.C2. The phylogenetic grouping was made on the basis of the presence of specific PCR-amplified fragments as follows: group B2 (chuA+, yjaA+, TspE.C2±), group D (chuA−, yjaA+, TspE.C2±), group B1 (chuA−, yjaA±, TspEC2+), and group A (chuA−, yjaA±, TspE.C2−) (Table 2).Table 2
Nucleotide sequences of PCR primers used for phylogenetic grouping ofE. coli [21].
Gene
Primer sequence (5′-3′)
Amplicon size (bp)
chuA
F
GACGAACCAACGGTCAGGAT
279
R
TGCCGCCAGTACCAAAGACA
YjaA
F
TGAAGTGTCAGGAGACGCTG
211
R
ATGGAGAATGCGTTCCTCAAC
TspE4.C2
F
GAGTAATGTCGGGGCATTCA
152
R
CGCGCCAACAAAGTATTACG


## 2.4. Genotypic Virulence Characterization of the Isolates

Multiplex PCR was used to detect five genes encoding virulence determinants usually associated with extraintestinal pathogenicE. colistrains (ExPEC VFs): neuC(K1 capsule antigen), hly(alpha-hemolysin), papC(type P pili), sfa/foc(type S pili and type 1C fimbriae), fimH(type 1 pili), and iucC(aerobactin) [2, 7]. Virulence factor genes were amplified with the primers described in Table 3, in a total volume of 50 μL containing 25 μL of KapaTaq 2x Ready Mix (KAPA Biosystems, USA), 20 pmol concentrations of each primer except hly (30 pmol), and 5 μL of DNA template [18]. The reaction conditions were as follows [24]: initial denaturation at 94°C for 4 min followed by 25 cycles of denaturation at 94°C for 30 s, annealing at 63°C for 30 s, and extension at 68°C for 3 min, followed by a final 10 min extension period at 72°C. The amplification products were separated by electrophoresis in a 2% agarose gel containing ethidium bromide. A 100-bp DNA ladder (Kappa Universal) was used in each gel as a molecular size marker.Table 3
Nucleotide sequences of PCR primers used to amplify five ExPEC VFs.
Gene
Primer sequence (5′-3′)
Amplicon size (bp)
Reference
hly
F
AACAAGGATAAGCACTGTTCTGGCT
1,177
[18]
R
ACCATATAAGCGGTCATTCCCGTCA
papC
F
GACGGCTGTACTGCAGGGTGTGGCG
328
[22]
R
ATATCCTTTCTGCAGGGATGCAATA
sfa/foc
F
CTCCGGAGAACTGGGTGCATCTTAC
410
[22]
R
CGGAGGAGTAATTACAAACCTGGCA
iucC
F
AAACCTGGCTTACGCAACTGT
269
[23]
R
ACCCGTCTGCAAATCATGGAT
fimH
F
TGCAGAACGGATAAGCCGTGG
508
[24]
R
GCAGTCACCTGCCCTCCGGTA
hly: alpha-hemolysin; papC: P fimbriae; sfa/foc: S fimbriae and F1C fimbriae; iucC: aerobactin; and fimH: type 1 fimbriae.


## 2.5. Statistical Analysis

The results were analyzed statistically using Chi-square [25]. A P value below 0.05 was considered to indicate statistical significance.


## 3. Results

Sixty-one vaginalE. coli isolates from pregnant and nonpregnant women were surveyed for papG alleles as predisposing factor to pyelonephritis. Sixty-one fecal isolates from healthy volunteers were also included for comparison. papG allele II was the most prevalent allele among both vaginal (32.7%) and fecal (3.2%) isolates, whereas other alleles were found only among vaginal isolates (1.6% for alleles I and III and 3.2% for alleles II + III). Also 90% (9/10) and 78.5% (11/14) of papG+ pregnant and nonpregnant women’s vaginal isolates were papG allele II+, respectively (Table 4).Table 4
Distribution ofpapG alleles among vaginal and fecal  E. coli isolates from pregnant and non-pregnant women.
Source of isolates
Study individuals (no.)
No. (%) of isolates positive forpapG alleles
I
II
III
II + III
Vaginal
Pregnant (23)
1 (4.3)
9 (39.1)
0
0
Nonpregnant (38)
0
11 (28.9)
1 (2.6)
2 (5.2)
Total (%)
(61)
1 (1.6)
20 (32.7)
1 (1.6)
2 (3.2)
Fecal
Pregnant (30)
0
2 (6.6)
0
0
Nonpregnant (31)
0
0
0
0
Total (%)
(61)
0
2 (3.2)
0
0papG
+ isolates were further genotyped for E. coli phylogenetic groups and ExPEC VFs’ genes (Table 5). papG+ vaginal isolates clustered in groups B2 (78.2%) and D (21.7%), whereas all of the fecal isolates clustered in group D. Except for sfa/foc, for all the studied VFs’ genes (Table 5), papG+ vaginal isolates did not differ significantly in comparison with papG+ fecal isolates. Also pregnant and nonpregnant women’s vaginal isolates did not differ significantly from each other for the possession of all the studied VFs’ genes.Table 5
Phylogenetic groups and ExPEC VFs' genes possessed bypapG+ vaginal and fecal  E. coli isolates from pregnant and nonpregnant women.
Traits
No. (%) of isolates positive for the indicated trait
Vaginal isolates
Fecal isolates
Pregnant women's isolates (n=10)
Nonpregnant women's isolates (n=14)
Total (n=23)
(n=2)
Phylogenetic groups
A
0
0
0
0
B1
0
0
0
0
B2
8 (80)
11 (78.5)
18 (78.2)
0
D
2 (20)
3 (21.4)
5 (21.7)
2 (100)
ExPEC VFs' genes
fimH
10 (100)
14 (100)
23 (100)
2 (100)
papC
10 (100)
14 (100)
23 (100)
2 (100)
Sfa/foc
6 (60)
7 (50.0)
13 (56.5)
0
hly
7 (70)
8 (57.1)
15 (65.2)
1 (50)
iucC
9 (90)
11 (78.5)
20 (86.9)
2 (100)The vast majority ofpapG allele II+ vaginal isolates were clustered in group B2 (81.8%) and much less in group D (18.1%) (Table 6), whereas all of the fecal isolates clustered in group D. Also, most of them were positive for fimH (100%),papC(100%),iucC(90.9%),  and  hly (72.7%), and about half of them were positive for sfa/foc (45.4%) (Table 6). In addition, the mean of VFs’ gene possession was 3.5 (range from 2 to 5).Table 6
Phylogenetic groups and ExPEC VFs' genes possessed bypapG allele II+ vaginal and fecal  E. coli isolates from pregnant and nonpregnant women.
Traits
No. (%) of isolates positive for the indicated trait
Vaginal isolates
fecal isolates
Pregnant women's isolates (n=9)
Nonpregnant women's isolates (n=13)
Total (n=22)
(n=2)
Phylogenetic groups
A
0
0
0
0
B1
0
0
0
0
B2
8 (88.8)
10 (76.9)
18 (81.8)
0
D
1 (11.1)
3 (23.0)
4 (18.1)
2 (100)
ExPEC VFs' genes
fimH
9 (100)
13 (100)
22 (100)
2 (100)
papC
9 (100)
13 (100)
22 (100)
2 (100)
Sfa/foc
3 (33.3)
7 (53.8)
10 (45.4)
0
hly
7 (77.7)
9 (69.2)
16 (72.7)
1 (50)
iucC
9 (100)
11 (84.6)
20 (90.9)
2 (100)


## 4. Discussion

Here in this work, the vast majority ofpapG allele II+ vaginal isolates clustered in group B2 and much less in group D, and most of them were positive for fimH, papC,iucC,   and  hly, and about half of them were positive for sfa/foc (Table 6). Previous studies demonstrated that vaginal E. coli share common virulence factor profiles, phylogenetic groups, and serotypes with E. coli strains from urinary and neonatal (blood and CSF) origins [11, 20] as the vagina favors colonization by strains that possess features different from those of fecal flora strains, therefore, the vagina can be considered as an anatomical barrier that selects for strains with a greater capacity to cause disease [26]. This high prevalence of phylogenetic group B2 and ExPEC VFs among this work’s isolates indicates their pathogenic potential as ExPEC (especially pyelonephritic E. coli) since most of UPEC strains belong to phylogenetic group B2 and, to a lesser extent, group D [7]. In addition UPEC strains harbor numerous VFs, such as adhesins (P fimbriae, type 1 fimbriae, S and F1C fimbriae, and afimbrial adhesin), toxins (hemolysin and cytotoxic necrotizing factor), siderophores (the aerobactin system), and polysaccharide coatings (group II capsules) [7, 27, 28].  In comparison with cystitis and fecal isolates, pyelonephritic E. coli had a much greater prevalence of phylogenetic group B2, UTI-associated O antigens, and individual VFs, plus higher aggregate VF scores [7]. PapGII and PapC are suggested to be associated with pyelonephritis and that papG allele II is one of the significant predictors of this infection [2, 29]. All papG allele II+ isolates in this work were positive for both papC and fimH and about half of them were positive for papC, fimH, and sfa/foc. This is consistent with others who demonstrated that type 1, P, S, F1C, and Dr fimbriae are all known to bind to different sites within the human kidney [2] and that P and Type 1 fimbriae appeared to act in synergy to promote colonization of kidney [30]. This possession of multiple fimbrial types contributes to the pathogen’s overall success during renal colonization [2].Pregnant women’s isolates did not differ significantly from those of nonpregnant in possession ofpapG allele II (39.1% versus 28.9%), whereas both (32.7%) differed significantly (P≤0.05) in comparison with fecal isolates (3.2%) (Table 4). Also papG allele II+ isolates did not differ significantly from each other regarding the phylogenetic groups and ExPEC VFs’ genotypes’ distribution (Tables 5 and 6) this indicates that both pregnant and nonpregnant women have the same chance to get pyelonephritis in accordance with this work’s proposal, although, previous studies found that acute pyelonephritis is more common in pregnant than in nonpregnant women [11, 31] which means that physiological differences seem to be the critical determinants of predisposition to this infection due to stasis of urine and bacteriuria in the urinary tract caused by relative obstruction [11]. The vaginal ecosystem and especially Lactobacillus, as well as intestinal populations of E. coli, coitus and the physiological and anatomical conditions of the urinary tract also play a major role in the pathogenesis of urinary tract infections [32].The possible role of vaginal colonization by such isolates as predisposing factor to pyelonephritis cannot be excluded and required furtherin vitro and in vivo analyses, as it previously had been found that vaginal colonization by E. coli represents an intermediate stage in extraintestinal E. coli pathogenesis [10] and women often suffer from an enhanced susceptibility to recurrent urinary and genital tract infections in association with uropathogenic E. coli strains [13]. So, it can be concluded that vaginal colonization by papG allele II+  E. coli is possibly one of the predisposing factors of both pregnant and nonpregnant women to pyelonephritis, but its potential is modified by other factors especially host factors.



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*Source: 860402-2013-06-19.xml*