# Persistent Cryptococcal Brain Infection despite Prolonged Immunorecovery in an HIV-Positive Patient

Authors: Tom Wingfield; Jo Baxter; Amit Herwadkar; Daniel du Plessis; Tom J. Blanchard; F. Javier Vilar; Anoop Varma
Journal: Case Reports in Neurological Medicine
 (2014)

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## Abstract

Background. HIV-positive people starting combined antiretroviral therapy may develop immune reconstitution to latent or treated opportunistic infections. Immune reconstitution to cerebral Cryptococcus is poorly understood and can be fatal.
Case Presentation. A 33-year-old Zimbabwean female presented with cryptococcal meningitis and newly diagnosed HIV with a CD4 count of 51 cells/μL (4%). She was treated with amphotericin and flucytosine. Combined antiretroviral therapy was started four weeks later and she showed early improvement. However, over the ensuing 18 months, her clinical course was marked by periodic worsening with symptoms resembling cryptococcal meningitis despite having achieved CD4 counts ≥400 cells/μL. Although initially treated for relapsing cryptococcal immune reconstitution syndrome, a brain biopsy taken 17 months after initial presentation showed budding Cryptococci. Conclusion. This unusually protracted case highlights the difficulties in differentiating relapsing cryptococcal meningitis from immune reconstitution and raises questions concerning the optimum timing of initiation of combined antiretroviral therapy in such patients.


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## Body

## 1. Introduction

We describe a patient with cryptococcal meningitis and an atypical immune reconstitution syndrome (IRIS) with multiple relapses over 18 months. We explore the diagnostic and therapeutic challenges surrounding the recognition and management of such relapsing cryptococcal disease. We also elaborate on how this rare case provided further insight into the pathological progression of IRIS, a phenomenon still not fully understood.


## 2. Case

In July 2005, a 33 year old Zimbabwean female, resident in the UK for 8 years, was admitted with a week history of fever, headache, and neck stiffness. She had no past medical history of note. Systemic examination showed fever and meningism but no focal neurological deficits. Blood tests revealed mild anaemia, lymphopenia, and raised C-reactive protein. An HIV test was positive with CD4 count of 51 cells/μL (4%). CT head without contrast showed marked meningeal inflammation but no focal lesions. A lumbar puncture (LP) revealed raised opening pressure (OP) of 27 cms H20, lymphocyte count (30/cu mm), protein (1.33 g/L), and CSF: serum glucose ratio of 50%. Cerebral spinal fluid (CSF) microscopy showed multiple yeast with high cryptococcal antigen (CRAG) titre of >1 : 25,600. CSF Acid-alcohol fast bacilli (AAFB), toxoplasmosis, and viral screens were negative. The patient was started on standard amphotericin with flucytosine and prophylactic cotrimoxazole.On day five of therapy, she began to complain of increasing headache and neck stiffness. A right-sided sixth nerve palsy was noted as a new neurological sign. An MRI brain showed changes in keeping with chronic meningitis and occipitoparietal changes (Figure1(a)). Repeat LP revealed OP of 40 cms H20 with persistently high protein and lymphocyte count. Over the next two weeks, the patient required a lumbar drain to alleviate excruciating pressure-related headaches.(a) MRI brain 5 days into admission in August 2005 showing right-sided occipitoparietal leptomeningeal inflammation. (b) MRI brain on readmission December 2005, 4 months after initial presentation showing worsening right-sided occipitoparietal leptomeningeal inflammation. (c) T2-weighted MRI brain in December 2006, 16 months after initial presentation showing large clusters of ring-enhancing lesions and leptomeningeal inflammation in the right occipitoparietal area with oedema and midline shift. Also seen but not shown on this cross-section were smaller clustered ring-enhancing lesions in the right thalamus and left frontal and temporal lobes.
(a)
(b)
(c)CSF cultures revealedCryptococcus neoformanssensitive to amphotericin B (Minimum Inhibitory Concentration “MIC” 0.125 mg/L) and itraconazole (MIC 0.03 mg/L) and intermediate to fluconazole (MIC 4.0 mg/L) and flucytosine (MIC 8.0 mgL). Amphotericin and flucytosine were continued for four weeks and then switched to oral fluconazole 800 mg once daily. This prolonged initial phase was based on symptom severity, high fungal burden, and relatively high MIC to fluconazole. A repeat MRI head showed regression of the previous changes.Four weeks into cryptococcal treatment, combined antiretroviral therapy (cART) was initiated with Kivexa (abacavir and lamivudine) and efavirenz. The patient then developed a new, persistent headache and subsequent LPs showed raised OPs, lymphocytes, and protein. Yeast cells persisted in CSF for 3 months after starting amphotericin and flucytosine and CSF cultures remained positive until September 2005 (2 months after treatment start).By October 2005, CSF cultures were negative for Cryptococcus and the patient had improved clinically. VL was undetectable and CD4 counts had risen minimally from 51 (4%) to 67 cells/μL (6%). She was discharged home on fluconazole (800 mg OD), cotrimoxazole, and cART.The patient then went on to have a difficult clinical course with recurrent admissions over the subsequent 14 months (Table1).Table 1
The patient’s relapsing clinical course with setting, symptoms, signs, investigations, imaging, and treatment choices.
Months after 1st presentation
Presenting complaint and potential precipitant
LP results
HIV parameters
MRI results
Brain biopsy
Treatment and length of stay
3Inpatient
Fever and meningismNo obvious precipitant
↑OP/lymphocytes/proteinCRAG 1 : 100 and yeast cells seen Culture negative
CD4 76 cells/μL (6%) HIV VL 601 copies/mL
—
—
Fluconazole changed to itraconazole due to MICSteroids started and patient discharged after two week stay on slowly tapering prednisolone dose
4Inpatient
Two focal seizures with secondary generalization. New neurological signs: RUL spastic catch, BL lower limb spasticity and ↑right plantarPatient ran out of prednisolone
↑OP/lymphocytes/proteinCRAG 1 : 32Yeast cells not seenCulture negative
CD4 67 cells/μL (5%) HIV VL 95 copies/mL
Worsening right occipito-parietal focal meningeal inflammation (Figure1(b))
Reactive gliosis and focally distended perivascular spaces containing cryptococcus (Figure2(a)) No other organisms were identified or cultured
Itraconazole dose increased and prednisolone reinstatedLamotrigine commencedDischarged after two week in-patient stay on itraconazole, prednisolone, and lamotrigine
8Outpatient
Asymptomatic
—
CD4 190 cells/μL (9%) HIV VL 40  copies/mL
—
—
Itraconazole changed to fluconazolePrednisolone tapered by 1 mg per week
15Outpatient
Non-attendance at clinicSelf-cessation of fluconazole despite good compliance otherwise
—
CD4 473 cells/μL (18%)HIV VL < 40 copies/mL
—
—
Fluconazole not restarted at this point
16Inpatient
Left-sided focal motor seizures with secondary generalizationNeurological examination normal, no headache10/40 pregnant but miscarried
—
—
—
—
Lamotrigine increased and clobazam added to anti-epileptic regimenEfavirenz substituted with lopinavir plus ritonavir for ↑CNS penetrationTotal inpatient stay of five days
17Inpatient
Headache, nausea and increasing unsteadinessClinical left sided dysdiadochokinesis with unsteady gait and inability to walk heel-to-toe.
First: ↑lymphocyte count (88/cu mm)/↑proteinCRAG/viral screen/AAFB No observable yeastCulture negativeSecond: Improving lymphocyte count (14/cu mm), all else as per first LP
CD4 560 cells/μL (24%)HIV VL < 40 copies/mL
Large clusters of ring-enhancing lesions and leptomeningeal inflammation in R occipito-parietal area with oedema and midline shift. Smaller clustered ring-enhancing lesions in R thalamus and L frontal and temporal lobes (Figure1(c))
Brain biopsy showed cryptococcal, encapsulated, budding yeast forms, scattered singly with some surrounding necrosis and moderate chronic inflammationNo granulomata were seen (Figure 2(b))No other organisms were identified or cultured
Ambisome 3 mg/kg once daily, flucytosine and high dose dexamethasone commencedAmbisome/flucytosine stopped when CSF CRAG result negativeAmbisome restarted without flucytosine when brain biopsy results became available One month stay, discharged on 600 mg fluconazole orally (changed to 400 mg in OPD clinic 6 weeks later) and a reducing steroid dose
40Outpatient
Full resolution of neurological symptomsNo further seizures
—
—
Resolution of MRI features
—
Self-discontinued fluconazole. Since discharge developed steroid-induced DM and avascular necrosis
Abbreviations: VL: viral load; L: left; R: right; BL: bilateral; ↑: raised above normal values; CNS: entral nervous system; DM: diabetes mellitus; CRAG: cryptococcal antigen; —: not performed.


## 3. Discussion

Cryptococcosis continues to be a major opportunistic pathogen in HIV-positive patients despite global upscaling of cART [1]. HIV causes depletion of T cell immunity allowing infection by, most commonly, Cryptococcus neoformans(var grubii or neoformans) [2, 3]. Cerebral cryptococcal infection remains the commonest cause of meningitis in areas of sub-Saharan Africa [4].Current guidelines for therapy for cryptococcal meningitis suggest amphotericin B at 0.7–1 mg/kg/day (or liposomal amphotericin B if renally impaired) combined with flucytosine 100 mg/kg/day switched to oral fluconazole after at least two weeks or once CSF sterility has been achieved. Fluconazole is then continued for a further 6 to 12 months or until CD4 count is above 250 cells/μL for 6 months [1, 2, 5–10]. Predictive markers of mycological failure have been found to be disseminated cryptococcal disease, high CSF CRAG titres and initial treatment lacking flucytosine [2, 11].Through immune restoration, cART has decreased morbidity and mortality from AIDS-associated opportunistic infections (OIs) [12, 13]. Although still not fully understood, IRIS represents a dysregulated immune response to pathogen-specific antigens occurring especially in HIV positive patients with advanced immunodeficiency commencing cART [14–16]. IRIS incidence in such patients varies from 10 to 32% [17–19]. IRIS can be subdivided into either “paradoxical” reactions which are a response to pathogen-specific antigens despite the pathogen itself being nonviable, or “unmasking” reactions which are a response to infections that were subclinical prior to cART [14, 15, 19]. Both types of IRIS are most common in the first 3 months after initiating cART but paradoxical IRIS may present much later, in some cases up to 2 years after initiation [10, 14]. Multiple manifestations of IRIS have been reported, including mycobacterium avium intracellulare lymphadenitis, pulmonary and neurological tuberculosis, and cryptococcal meningitis [14, 15]. Risk factors for IRIS include disseminated OI disease; recent OI treatment; low baseline CD4 with rapid rise after starting cART; and high baseline HIV VL with rapid decline after starting cART [14, 17, 20, 21].Paradoxical IRIS in HIV-positive patients with previously treated cryptococcal disease has been estimated between 4 and 30% and is associated with an exaggerated T-cell mediated production of interferon-gamma to pathogen specific antigens [10, 12, 18, 22, 23]. The most common presentations of cryptococcal IRIS are either meningitis or lymphadenitis [24]. This marked inflammatory response manifests itself clinically, with fever, lymphadenopathy, and meningism due to raised ICP; microbiologically, with high protein levels and CSF white cell counts including polymorphonuclear cells; neuroradiologically, with extensive abnormal contrast enhancement; and histologically, with granulomas composed mainly of macrophages (containing inert cryptococci) and high levels of CD8+ cytotoxic lymphocytes [10, 25–28].Our patient presented with cryptococcal meningitis as an AIDS-defining illness. She had a low CD4 count of 51 cells/μL (4%) and a high CSF CRAG titre of >1 : 25,600, visible yeast on microscopy, and subsequent positive fungal cultures. Her CSF remained culture positive for Cryptococcus until eight weeks after starting high-dose fluconazole, a total of 12 weeks after presentation, indicating a massive cryptococcal burden. Despite oral fluconazole, she had florid recrudescence of her symptoms at 1-2 months into cART with focal neurology, worsening MRI changes, biopsy-proven live Cryptococcus, and a good response to steroid therapy, typical of an unmasking IRIS [10, 25, 29]. This initial presentation was in keeping with the literature which highlights high baseline fungal burden (high blood or CSF CRAG), high fungal burden at end of amphotericin B induction treatment, low initial CD4 count, and early initiation of ART (less than 1-2 months from diagnosis of cryptococcal meningitis) as risk factors for cryptococcal IRIS [30–32]. Our patient, however, had by this time achieved only a minimal rise in her CD4 count (51 to 67 cells/μL) and, therefore, hypothetically minimal immune reconstitution.The AIDS Clinical Trials Group study 1564 reported benefits for starting cART early in the context of acute OIs (12% Cryptococcus) [33]. It is, however, our patient’s later presentations that provide contrast to existing guidelines for the management of cryptococcal IRIS. Eighteen months after her initial presentation, 11 months after achieving CSF sterility, and 2 months after finishing a year’s course of fluconazole and tapered steroids, she represented with a new acute syndrome with significant worsening in MRI appearance and visible budding yeast on brain biopsy (see Figure 2), indicative of active infection. By this point, her CD4 count had risen substantially to 437 cells/μL (18%) and this, in conjunction with the profound inflammatory reaction and live budding Cryptococcus, may have indicated a relapse of cryptococcal IRIS or disease. It appears that our patient was unable to arrest fungal replication despite what appeared to be a good peripheral blood CD4 count and supposed “immune reconstitution”. This raises questions concerning the quality of the CD4 response, compartmentalisation of CD4 immunity, and the correlation of a rise in peripheral CD4 count with activity of CNS immunity [34–36].(a) Brain biopsy taken in December 2005, 4 months after initial presentation showing reactive gliosis and focally distended perivascular spaces containing Cryptococcus. (b) Brain biopsy taken in December 2006, 16 months after initial presentation showing encapsulated, budding yeast forms, scattered singly with some surrounding necrosis and moderate chronic inflammation. No granulomata were seen.
(a)
(b)This unusual case illustrates that HIV-associated cryptococcal IRIS, especially in severely immunocompromised patients with high burden of organism, can be difficult to distinguish from recurrent cryptococcal meningitis and that the role of MIC in clinical practice for cryptococcal meningitis remains to be defined [37]. Regarding MIC, our experience with this patient does not correlate with the recently published guidelines [38] for the management of cryptococcal meningitis: in particular continuing fluconazole treatment and repeated brain biopsies were essential for management despite the CD4 count increasing above 100 cells/μL. Corticosteroids for IRIS caused substantial morbidity, but there is no established alternative and possible therapy with thalidomide would not have been safe in this patient of childbearing potential. Were our patient to have continued to relapse with active cryptococcal disease, we would have needed to consider suppressive therapy with newer broad spectrum azoles such as voriconazole or posaconazole (echinocandins have no activity against Cryptococcus) [38].In order to prevent relapse of symptoms, patients such as ours may require prolongation of amphotericin B and flucytosine induction therapy and subsequent fluconazole and steroid maintenance therapy, beyond that recommended by existing guidelines [39]. This case highlights the difficulty in differentiating cryptococcal meningitis from cryptococcal IRIS [40, 41] and emphasizes the need for further evidence on the optimal time to start ART in HIV-positive patients presenting with cryptococcal meningitis as highlighted by a recent Cochrane review [41].



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