A system for sample bioprocessing, comprising: a. a fluidics cartridge that includes a first well and a second well, wherein the first well holds a fluid sample that includes one or more magnetic particles; b. a bioprocessing card that includes a first pipette tip, a second pipette tip, and a pump that are in fluid communication along a processing channel and that is placed in proximity to the fluidics cartridge so that the first pipette tip is in fluid communication with the first well and the second pipette tip is in fluid communication with the second well; c. a manifold that is in physical communication with the bioprocessing card; d. a magnetic assembly that is placed in proximity to the fluidics cartridge; e. a memory that includes instructions for a sample preparation protocol; and f. a processor that is in electronic communication with the manifold, the magnetic assembly, and the memory, that reads the instructions from the memory, and that according to the instructions i. activates the magnetic assembly to apply a magnetic field to the first well so that at least one magnetic particle of the one or more magnetic particles of the fluid sample is attracted and ii. signals the manifold to apply pressure and/or vacuum to the bioprocessing card activating fluid valves of the first pipette tip, the second pipette tip, and the pump to move a portion of the fluid sample from the first well through the processing channel, to the second well producing a bioprocessed sample in the first well. a. a fluidics cartridge that includes a first well and a second well, wherein the first well holds a fluid sample that includes one or more magnetic particles; b. a bioprocessing card that includes a first pipette tip, a second pipette tip, and a pump that are in fluid communication along a processing channel and that is placed in proximity to the fluidics cartridge so that the first pipette tip is in fluid communication with the first well and the second pipette tip is in fluid communication with the second well; c. a manifold that is in physical communication with the bioprocessing card; d. a magnetic assembly that is placed in proximity to the fluidics cartridge; e. a memory that includes instructions for a sample preparation protocol; and f. a processor that is in electronic communication with the manifold, the magnetic assembly, and the memory, that reads the instructions from the memory, and that according to the instructions i. activates the magnetic assembly to apply a magnetic field to the first well so that at least one magnetic particle of the one or more magnetic particles of the fluid sample is attracted and ii. signals the manifold to apply pressure and/or vacuum to the bioprocessing card activating fluid valves of the first pipette tip, the second pipette tip, and the pump to move a portion of the fluid sample from the first well through the processing channel, to the second well producing a bioprocessed sample in the first well. i. activates the magnetic assembly to apply a magnetic field to the first well so that at least one magnetic particle of the one or more magnetic particles of the fluid sample is attracted and ii. signals the manifold to apply pressure and/or vacuum to the bioprocessing card activating fluid valves of the first pipette tip, the second pipette tip, and the pump to move a portion of the fluid sample from the first well through the processing channel, to the second well producing a bioprocessed sample in the first well.