A control system for secure manufacturing, the control system for secure manufacturing comprising: a source end, comprising a first security module, an encryption module, and a secure transfer processing module, generating an authorization information and a transfer file; the first security module comprising an encryption key, an encryption public key, and a signature private key; wherein the transfer file is generated by encrypting a source file using the encryption key, the encryption public key, and the signature private key; a verification end, comprising a security verification module; wherein the source end is configured to transfer the authorization information to the verification end, and a production end, comprising a second security module, a security processing module, and a manufacturing module; and the second security module comprising a verification public key corresponding to the signature private key, a decryption private key corresponding to the encryption public key, and a decryption key corresponding to the encryption key, wherein the security processing module receives the transfer file from the secure transfer processing module; and after the production end is verified by the security verification module according to the authorization information, if the production end passes the verification, the security processing module performs a pre-manufacturing process to generate a manufacturing file, and the manufacturing module adds the manufacturing file to a product or generates a product according to the manufacturing file; wherein the pre-manufacturing process uses the second security module to decrypt the transfer file, to re-encrypt the transfer file based on a feature, and to convert the transfer file into the manufacturing file, wherein the feature is unique to the product, and wherein the transfer file is decrypted by using the verification public key the decryption private key, and the decryption key. a source end, comprising a first security module, an encryption module, and a secure transfer processing module, generating an authorization information and a transfer file; the first security module comprising an encryption key, an encryption public key, and a signature private key; wherein the transfer file is generated by encrypting a source file using the encryption key, the encryption public key, and the signature private key; a verification end, comprising a security verification module; wherein the source end is configured to transfer the authorization information to the verification end, and a production end, comprising a second security module, a security processing module, and a manufacturing module; and the second security module comprising a verification public key corresponding to the signature private key, a decryption private key corresponding to the encryption public key, and a decryption key corresponding to the encryption key, wherein the security processing module receives the transfer file from the secure transfer processing module; and after the production end is verified by the security verification module according to the authorization information, if the production end passes the verification, the security processing module performs a pre-manufacturing process to generate a manufacturing file, and the manufacturing module adds the manufacturing file to a product or generates a product according to the manufacturing file; wherein the pre-manufacturing process uses the second security module to decrypt the transfer file, to re-encrypt the transfer file based on a feature, and to convert the transfer file into the manufacturing file, wherein the feature is unique to the product, and wherein the transfer file is decrypted by using the verification public key the decryption private key, and the decryption key.