opened
droazen
username_0
`AssemblyRegionWalker` doesn't call `getTransformedReadStream()` from `GATKTool`, and therefore doesn't respect `ReadTransformer` settings. This should be fixed to be consistent with `ReadWalker` and `LocusWalker`
AssemblyRegionWalker doesn't respect ReadTransformer settings
issue
closed
davidbenjamin
username_1
issue