lokahq/bioreason-rl huggingface dataset:
Protein: Protein limb expression 1 homolog (Q8N485)
Organism: Homo sapiens (Human)
Function: Not known
InterPro domains:
- IPR029270: Limb expression 1 (family) [11-258]
- IPR051436: Autophagy-related EPG5 (family) [27-110]
Sequence:
MDRTLESLRHIIAQVLPHRDPALVFKDLNVVSMLQEFWESKQQQKAAFPSEGVVVYESLPAPGPPFVSYVTLPGGSCFGNFQCCLSRAEARRDAAKVALINSLFNELPSRRITKEFIMESVQEAVASTSGTLDDADDPSTSVGAYHYMLESNMGKTMLEFQELMTIFQLLHWNGSLKALRETKCSRQEVISYYSQYSLDEKMRSHMALDWIMKERDSPGIVSQELRMALRQLEEARKAGQELRFYKEKKEILSLALTQICSDPDTSSPSDDQLSLTALCGYH
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0032501 (multicellular organismal process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0048731 (system development), GO:0048513 (animal organ development), GO:0001501 (skeletal system development), GO:0060348 (bone development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005829 (cytosol), GO:0005737 (cytoplasm), GO:0031974 (membrane-enclosed lumen), GO:0005654 (nucleoplasm), GO:0043233 (organelle lumen), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0070013 (intracellular organelle lumen), GO:0031981 (nuclear lumen), GO:0005634 (nucleus)
Protein: Probable glutamine synthetase (Q9I6J5)
Organism: Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Function: Not known
InterPro domains:
- IPR014746: Glutamine synthetase/guanido kinase, catalytic domain (homologous_superfamily) [122-456]
- IPR027303: Glutamine synthetase, glycine-rich site (conserved_site) [257-272]
- IPR036651: Glutamine synthetase, N-terminal domain superfamily (homologous_superfamily) [12-122]
- IPR008147: Glutamine synthetase, N-terminal domain (domain) [21-116]
- IPR008146: Glutamine synthetase, catalytic domain (domain) [120-458]
Sequence:
MSVPQRAVQLTEPSEFLKEHPEVQFVDLLIADMNGVVRGKRIERNSLNKVFEKGINLPASLFALDITGSTVESTGLGLDIGDADRICYPIPGTLSMEPWQKRPTAQLLMTMHELEGEPFFADPREVLRQVVARFTEMELTIVAAFELEFYLIDQENVNGRPQPPRSPISGKRPQSVQVYSIDDLDEYVECLQDIIDGARAQGIPADAIVAESAPAQFEVNLNHVNDALKACDHAVLLKRLVKNIAYDHEMDTTFMAKPYPGQAGNGLHVHISLLDKHGNNIFTSEDPEQNAALRHAIGGVLETLPASMAFLCPNVNSYRRFGSQFYVPNAPSWGLDNRTVALRVPTGSPDAVRLEHRVAGADANPYLLLAAVLAGVHHGLTNKVEPGAPIEGNSYEQMEPSLPNNLRDALRELDESEIMAKYIDPKYIDIFVACKESELEEFEHSISDLEYNWYLHTV
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0016874 (ligase activity), GO:0016879 (ligase activity, forming carbon-nitrogen bonds), GO:0016880 (acid-ammonia (or amide) ligase activity), GO:0016211 (ammonia ligase activity), GO:0004356 (glutamate-ammonia ligase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009056 (catabolic process), GO:0071704 (organic substance metabolic process), GO:0006807 (nitrogen compound metabolic process), GO:1901575 (organic substance catabolic process), GO:1901564 (organonitrogen compound metabolic process), GO:0009308 (amine metabolic process), GO:1901565 (organonitrogen compound catabolic process), GO:0006576 (biogenic amine metabolic process), GO:0009310 (amine catabolic process), GO:0006595 (polyamine metabolic process), GO:0042402 (cellular biogenic amine catabolic process), GO:0006598 (polyamine catabolic process)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005737 (cytoplasm), GO:0005622 (intracellular anatomical structure)
Protein: Late cornified envelope protein 3E (Late envelope protein 17) (Q5T5B0)
Organism: Homo sapiens (Human)
Function: Precursors of the cornified envelope of the stratum corneum.
InterPro domains:
- IPR028205: Late cornified envelope protein (family) [1-92]
Sequence:
MSCQQNQKQCQPPPKCPSPKCPPKNPVQCLPPASSGCAPSSGGCGPSSEGGCFLNHHRRHHRCRRQRSNSCDRGSGQQGGGSGCCHGSGGCC
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0009987 (cellular process), GO:0050896 (response to stimulus), GO:0044419 (biological process involved in interspecies interaction between organisms), GO:0001906 (cell killing), GO:0009605 (response to external stimulus), GO:0006950 (response to stress), GO:0031640 (killing of cells of another organism), GO:0051707 (response to other organism), GO:0009607 (response to biotic stimulus), GO:0006952 (defense response), GO:0043207 (response to external biotic stimulus), GO:0009617 (response to bacterium), GO:0098542 (defense response to other organism), GO:0042742 (defense response to bacterium), GO:0050829 (defense response to Gram-negative bacterium), GO:0050830 (defense response to Gram-positive bacterium)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005737 (cytoplasm), GO:0005829 (cytosol), GO:0005622 (intracellular anatomical structure)
Protein: Clathrin interactor 1 isoform 1 (A0A0S2Z4Y4)
Organism: Homo sapiens (Human)
Function: Not known
InterPro domains:
- IPR013809: ENTH domain (domain) [16-149]
- IPR008942: ENTH/VHS (homologous_superfamily) [2-162]
Sequence:
MLNMWKVRELVDKATNVVMNYSEIESKVREATNDDPWGPSGQLMGEIAKATFMYEQFPELMNMLWSRMLKDNKKNWRRVYKSLLLLAYLIRNGSERVVTSAREHIYDLRSLENYHFVDEHGKDQGINIRQKVKELVEFAQDDDRLREERKKAKKNKDKYVGVSSDSVGGFRYSERYDPEPKSKWDEEWDKNKSAFPFSDKLGELSDKIGSTIDDTISKFRRKDREDSPERCSDSDEEKKARRGRSPKGEFKDEEETVTTKHIHITQATETTTTRHKRTANPSKTIDLGAAAHYTGDKASPDQNASTHTPQSSVKTSVPSSKSSGDLVDLFDGTSQSTGGSADLFGGFADFGSAAASGSFPSQVTATSGNGDFGDWSAFNQAPSGPVASSGEFFGSASQPAVELVSGSQSALGPPPAASNSSDLFDLMGSSQATMTSSQSMNFSMMSTNTVGLGLPMSRSQNTDMVQKSVSKTLPSTWSDPSVNISLDNLLPGMQPSKPQQPSLNTMIQQQNMQQPMNVMTQSFGAVNLSSPSNMLPVRPQTNALIGGPMPMSMPNVMTGTMGMAPLGNTPMMNQSMMGMNMNIGMSAAGMGLTGTMGMGMPNIAMTSGTVQPKQDAFANFANFSK
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding), GO:0050839 (cell adhesion molecule binding), GO:0030276 (clathrin binding), GO:0045296 (cadherin binding)
Biological Process (BP): GO:0008150 (biological process), GO:0009987 (cellular process), GO:0071840 (cellular component organization or biogenesis), GO:0016043 (cellular component organization), GO:0044085 (cellular component biogenesis), GO:0043933 (protein-containing complex organization), GO:0022607 (cellular component assembly), GO:0065003 (protein-containing complex assembly), GO:0048268 (clathrin coat assembly)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0031974 (membrane-enclosed lumen), GO:0005654 (nucleoplasm), GO:0043233 (organelle lumen), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0070013 (intracellular organelle lumen), GO:0031981 (nuclear lumen), GO:0005634 (nucleus)
Protein: RIKEN cDNA 1810065E05 gene (Q5NC41)
Organism: Mus musculus (Mouse)
Function: Not known
InterPro domains:
- IPR016054: Ly-6 antigen/uPA receptor-like (domain) [35-195]
- IPR045860: Snake toxin-like superfamily (homologous_superfamily) [119-198]
- IPR050918: CNF-like Phospholipase A2 Inhibitor (family) [11-232]
Sequence:
MFWSSVSKSLLAVCVVTEFAVIFVESLSCENSMCTNGLCQPMGTCNTSKSCFSQTQEFKMPELSTSLSVQQKGCSLDECTGLAFSATLGDQRTFRYDQRCCTTDKCNQVDTKPSQVPAKANGVQCLACYMEAGRVCIPTPLKCTGSETKCVAVIGTAVGSSSPLSVVMVGSGCATESACNLNMTVLDFVNIRTFCSSGFPVLPTPSSAPDGLGLRSASISTVPVLISLLLLKVLV
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0044419 (biological process involved in interspecies interaction between organisms), GO:0009605 (response to external stimulus), GO:0009607 (response to biotic stimulus), GO:0051707 (response to other organism), GO:0009617 (response to bacterium), GO:0043207 (response to external biotic stimulus)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0005886 (plasma membrane)
Protein: Transgelin-2 (Epididymis tissue protein Li 7e) (SM22-alpha homolog) (P37802)
Organism: Homo sapiens (Human)
Function: Not known
InterPro domains:
- IPR036872: CH domain superfamily (homologous_superfamily) [1-196]
- IPR003096: Smooth muscle protein/calponin (family) [3-190]
- IPR050606: Calponin-like (family) [1-198]
- IPR000557: Calponin repeat (repeat) [174-199]
- IPR001715: Calponin homology domain (domain) [24-136]
Sequence:
MANRGPAYGLSREVQQKIEKQYDADLEQILIQWITTQCRKDVGRPQPGRENFQNWLKDGTVLCELINALYPEGQAPVKKIQASTMAFKQMEQISQFLQAAERYGINTTDIFQTVDLWEGKNMACVQRTLMNLGGLAVARDDGLFSGDPNWFPKKSKENPRNFSDNQLQEGKNVIGLQMGTNRGASQAGMTGYGMPRQIL
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0009987 (cellular process), GO:0048869 (cellular developmental process), GO:0048856 (anatomical structure development), GO:0009888 (tissue development), GO:0030154 (cell differentiation), GO:0061061 (muscle structure development), GO:0048513 (animal organ development), GO:0007517 (muscle organ development), GO:0060429 (epithelium development), GO:0030855 (epithelial cell differentiation)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0030054 (cell junction), GO:0005829 (cytosol), GO:0005737 (cytoplasm), GO:0031974 (membrane-enclosed lumen), GO:0005654 (nucleoplasm), GO:0043233 (organelle lumen), GO:0043229 (intracellular organelle), GO:0070161 (anchoring junction), GO:0043227 (membrane-bounded organelle), GO:0030055 (cell-substrate junction), GO:0043231 (intracellular membrane-bounded organelle), GO:0070013 (intracellular organelle lumen), GO:0005925 (focal adhesion), GO:0031981 (nuclear lumen), GO:0005634 (nucleus)
Protein: Rifin (Q8IAS6)
Organism: Plasmodium falciparum (isolate 3D7)
Function: Not known
InterPro domains:
- IPR006373: Variant surface antigen Rifin (family) [1-332]
Sequence:
MRIHYINMFLFSLMFNILLNVNKNHYNTTLHTPNTTKIPTTRLLCECELYAPSNYNNDPEMKQVMDNFDRHTQQRFHEYEQRMIKNRKECKEQCEQNIQKLILKEKIQKELKEKFSALQIDISTHDIPTCVCEKSVADKTEKFCLKCGYGLGGALTAWQIFGYTGIYGWANYAALLAHEAGVKAGIKVVIDMFSTYPGLISLPGVDLTKMINGSNFNIPMELVNIVKGLSNGLCKTPNKHLFCAFTNMEKGQSLVSFANSASQSGIMEAASVQGAKVAIIKTTTADFSYNMIVSGITIFVIVLVMVIIYFILRYRRKKKMKKKLQYIKLLKE
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0044419 (biological process involved in interspecies interaction between organisms), GO:0009605 (response to external stimulus), GO:0044403 (biological process involved in symbiotic interaction), GO:0051707 (response to other organism), GO:0009607 (response to biotic stimulus), GO:0051701 (biological process involved in interaction with host), GO:0075136 (response to host), GO:0043207 (response to external biotic stimulus), GO:0052173 (response to defenses of other organism), GO:0052200 (response to host defenses), GO:0052572 (response to host immune response), GO:0042783 (evasion of host immune response), GO:0020033 (antigenic variation)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0018995 (host cellular component), GO:0033643 (host cell part), GO:0043657 (host cell), GO:0033644 (host cell membrane), GO:0020002 (host cell plasma membrane)
Protein: Lysine demethylase 5B (A0A3B3IT85)
Organism: Homo sapiens (Human)
Function: Not known
InterPro domains:
- IPR001606: ARID DNA-binding domain (domain) [34-125]
- IPR011011: Zinc finger, FYVE/PHD-type (homologous_superfamily) [241-299]
- IPR019787: Zinc finger, PHD-finger (domain) [243-293]
- IPR013083: Zinc finger, RING/FYVE/PHD-type (homologous_superfamily) [229-316]
- IPR047981: Lysine-specific demethylase 5B, ARID domain (domain) [31-120]
- IPR019786: Zinc finger, PHD-type, conserved site (conserved_site) [246-290]
- IPR036431: ARID DNA-binding domain superfamily (homologous_superfamily) [14-128]
- IPR047978: Lysine-specific demethylase 5B, first PHD-finger (domain) [245-290]
- IPR001965: Zinc finger, PHD-type (domain) [245-291]
Sequence:
XRPPPDWQPPFACDVDKLHFTPRIQRLNELEAQTRVKLNFLDQIAKYWELQGSTLKIPHVERKILDLFQLNKLVAEEGGFAVVCKDRKWTKIATKMGFAPGKAVGSHIRGHYERILNPYNLFLSGDSLRKPNLTTDTKDKEYKPHDIPQRQSVQPSETCPPARRAKRMRAEAMNIKIEPEETTEARTHNLRRRMGCPTPKCENEKEMKSSIKQEPIERKDYIVENEKEKPKSRSKKATNAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQECSKPQEAFGFEQAARDYTLRTF
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0065007 (biological regulation), GO:0050789 (regulation of biological process), GO:0019222 (regulation of metabolic process), GO:0050794 (regulation of cellular process), GO:0060255 (regulation of macromolecule metabolic process), GO:0031323 (regulation of cellular metabolic process), GO:0080090 (regulation of primary metabolic process), GO:0009889 (regulation of biosynthetic process), GO:0051171 (regulation of nitrogen compound metabolic process), GO:0019219 (regulation of nucleobase-containing compound metabolic process), GO:0051252 (regulation of RNA metabolic process), GO:0010556 (regulation of macromolecule biosynthetic process), GO:0010468 (regulation of gene expression), GO:0031326 (regulation of cellular biosynthetic process), GO:2001141 (regulation of RNA biosynthetic process), GO:0006355 (regulation of DNA-templated transcription), GO:1903506 (regulation of nucleic acid-templated transcription), GO:0006357 (regulation of transcription by RNA polymerase II)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0031974 (membrane-enclosed lumen), GO:0005654 (nucleoplasm), GO:0043229 (intracellular organelle), GO:0043233 (organelle lumen), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0070013 (intracellular organelle lumen), GO:0031981 (nuclear lumen), GO:0005634 (nucleus)
Protein: Small nuclear ribonucleoprotein Sm D3 (Sm-D3) (snRNP core protein D3) (P62320)
Organism: Mus musculus (Mouse)
Function: Plays a role in pre-mRNA splicing as a core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome (By similarity). As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing.
Subcellular location: Cytoplasm, cytosol {ECO:0000250|UniProtKB:P62318}. Nucleus {ECO:0000269|PubMed:19470752}. Note=SMN-mediated assembly into core snRNPs occurs in the cytosol before SMN-mediated transport to the nucleus to be included in spliceosomes. {ECO:0000250|UniProtKB:P62318}.
InterPro domains:
- IPR027141: Like-Sm (LSM) domain containing protein, LSm4/SmD1/SmD3 (family) [3-114]
- IPR047575: Sm domain (domain) [5-77]
- IPR010920: LSM domain superfamily (homologous_superfamily) [6-118]
- IPR034099: Small nuclear ribonucleoprotein Sm D3 (family) [6-75]
- IPR001163: Sm domain, eukaryotic/archaea-type (domain) [8-73]
Sequence:
MSIGVPIKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVAQLEQVYIRGSKIRFLILPDMLKNAPMLKSMKNKNQGSGAGRGKAAILKAQVAARGRGRGMGRGNIFQKRR
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0097159 (organic cyclic compound binding), GO:1901363 (heterocyclic compound binding), GO:0005515 (protein binding), GO:0003676 (nucleic acid binding), GO:0019899 (enzyme binding), GO:0003723 (RNA binding), GO:0070034 (telomerase RNA binding), GO:0017069 (snRNA binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0032501 (multicellular organismal process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0048731 (system development), GO:0048513 (animal organ development), GO:0072359 (circulatory system development), GO:0007507 (heart development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Sortilin (Q8IKV8)
Organism: Plasmodium falciparum (isolate 3D7)
Function: Not known
Subcellular location: Membrane {ECO:0000256|ARBA:ARBA00004370}.
InterPro domains:
- IPR031778: Sortilin, N-terminal (domain) [99-599]
- IPR050310: VPS10-related sortilin family receptors (family) [89-765]
- IPR036278: Sialidase superfamily (homologous_superfamily) [99-400]
- IPR015943: WD40/YVTN repeat-like-containing domain superfamily (homologous_superfamily) [57-257]
- IPR006581: VPS10 (domain) [89-765]
- IPR031777: Sortilin, C-terminal (domain) [602-758]
Sequence:
MKKKLEKQKKLLEYEKGYYSNKVKMRNMLFFKSIGNKNHLFLVFLLFLFFSFSCINFTQCQITKKKVSVSEINFDSAVDDVQWCGNNHMTVLVKTVKGRLYRSSDGGKIWTNITGNLSDKENNKSDPSSNHMNEMTTVDLIMVNSVNKNIVLIIGNQKNHYISEDSGETFRLLNYQNKINFWQFHSTKTHWALVSSWTEACYSNDDNSGECMQTLSLTKDLGRTFQLIDIYVVQFNWGDKESHLEDTIYYTRHKNRNGHQQRFSGWSKDVDFVATHNFGKSVDVLVKQGNKFLISNGYIFVAKLNDVIKQTVNMMVSTDGGKTFNKANLPENIHEKSYTVLDTSEGSIMLHVNHGTSSEKINTGNVYISDASGLNYTLSLPNNIRTSSGECEFDRVLSLDGVYIANFLDVNNEIKDEDLRFQNFKSAIEEDIAPFETNTEKRKKQYNKGKNEDAVRTVISFNKGGEWSYLKAPKVDSRGNKYECGDNCYLHLHGITNYHQYAPFYSIENAVGIIMGTGNVGSHLRYESDEVNTFLSRDGGVTWIEAHKGPYIYEYGDYGGLIVMADDLRKTNQIVFSWNEGQSWFDFELGQFSIDVDNIVAEPNSASVEFLVYGTRNDVGVLYHLDFNALGQPLCKGLWAADSVSSDYETWSPTSGNFNDKCILGRKITYTRRKQTSECFNGKDLKRTVDKKPCECTPEDYECETGFTRKIGSYECKPNDPTLTIEGCTSSSYFYANAYRKVPGDICVNGWVPEKVPVPCPSYAPFNKTAKSILFIIFIMGIVMLIITYICRNPKFKNLFYNYGFDTFENVKYSVIKTKRGNVNNNVFEPEMEFIDAEQDDNEEDVPTLLPYSSDRNRSTNKDFTLARNRTNQNNNITSRNISPSKNYADNIELL
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0009987 (cellular process), GO:0051179 (localization), GO:0051234 (establishment of localization), GO:0051641 (cellular localization), GO:0033036 (macromolecule localization), GO:0070727 (cellular macromolecule localization), GO:0051649 (establishment of localization in cell), GO:0046907 (intracellular transport), GO:0045184 (establishment of protein localization), GO:0006810 (transport), GO:0071702 (organic substance transport), GO:0006886 (intracellular protein transport), GO:0016192 (vesicle-mediated transport), GO:0071705 (nitrogen compound transport), GO:0008104 (protein localization), GO:0015031 (protein transport)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0012505 (endomembrane system), GO:0005794 (Golgi apparatus), GO:0031410 (cytoplasmic vesicle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0031982 (vesicle), GO:0097708 (intracellular vesicle)
Protein: Transducin/WD40 repeat-like superfamily protein (F4K0D3)
Organism: Arabidopsis thaliana (Mouse-ear cress)
Function: Not known
InterPro domains:
- IPR001680: WD40 repeat (repeat) [149-457]
- IPR036322: WD40-repeat-containing domain superfamily (homologous_superfamily) [148-456]
- IPR015943: WD40/YVTN repeat-like-containing domain superfamily (homologous_superfamily) [131-457]
- IPR053053: WD repeat-containing protein (family) [3-457]
- IPR019775: WD40 repeat, conserved site (conserved_site) [176-190]
Sequence:
MDLICNSYANDSDDEPEPVTNERLTSKIAAAPSIPSKRPYPVPEERQYKPPRRPYPPHGSYSESQTSSSFSIPVPVPVPVPGRYVSKRERSLLASLSTIPTPDQSSDLSQKPYSSPTVLGSISDSDVPRHVLSSVRHRPKGSSLQTEMPSRMSISLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKKKVRAFLHHNAPVKDVKWSKQGLSLLSCGYDCTSRLFDVERGVETQSFKEDEVVGVVKFHPDNCNVFLSGGSKGSLRLWDIRANKFVHEYVRDLGPILDVEFIAGGKQFISSSDVSGRNISENAVIVWDISREVPLSNQVYVEAYTCPCIKRHPQDPVFIAQSHGNYTAIFSTNPPFKLNKYKRFEGHWVAGFPIKCNFSPDGETLASGSSDGSVYMYDYKSTALIKKLKAYEQPCVNVSYHPVLPNVVAACSWNGQVSVFE
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0044237 (cellular metabolic process), GO:0071704 (organic substance metabolic process), GO:0044238 (primary metabolic process), GO:0006807 (nitrogen compound metabolic process), GO:0006725 (cellular aromatic compound metabolic process), GO:0034641 (cellular nitrogen compound metabolic process), GO:1901360 (organic cyclic compound metabolic process), GO:0006139 (nucleobase-containing compound metabolic process), GO:0043170 (macromolecule metabolic process), GO:0046483 (heterocycle metabolic process), GO:0090304 (nucleic acid metabolic process), GO:0010467 (gene expression), GO:0016070 (RNA metabolic process), GO:0006396 (RNA processing), GO:0008380 (RNA splicing), GO:0006397 (mRNA processing), GO:0016071 (mRNA metabolic process), GO:0000398 (mRNA splicing, via spliceosome), GO:0000375 (RNA splicing, via transesterification reactions), GO:0000380 (alternative mRNA splicing, via spliceosome), GO:0000377 (RNA splicing, via transesterification reactions with bulged adenosine as nucleophile)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)