lokahq/bioreason-rl huggingface dataset:
Protein: Far upstream element-binding protein 1 isoform X2 (A0A8M3ANN4)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR004087: K Homology domain (domain) [88-446]
- IPR048251: Far upstream element-binding protein 1, third type I KH domain (domain) [268-335]
- IPR004088: K Homology domain, type 1 (domain) [92-443]
- IPR036612: K Homology domain, type 1 superfamily (homologous_superfamily) [84-460]
- IPR015096: Far upstream element-binding protein, C-terminal (domain) [563-618]
- IPR048250: Far upstream element-binding protein 1, second type I KH domain (domain) [174-244]
- IPR048252: Far upstream element-binding protein 1, fourth type I KH domain (domain) [374-445]
Sequence:
MADYSNVAPPSSNAGGGMNDAFKDALQRARQIAAKIGGDGVPPSPVSNDFGYGGQKRPLEDGDQPETKKVPPSDPFSAVMGGMGGPPRSVSEEFKVPDGMVGFIIGRGGEQISRLQQESGCKIQIAPDSGGMPDRSVTLTGSPDAIMTAKRLLSEIVEKGRPSPAFHHNDGPGMSVHEMMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRISGDPFKVQQAKDMVMDLIRDQGFREQRGEYGSRAGGGGGGGESLDVPVPRFAVGIVIGRSGEMIKKIQNDTGVRIQFKPDDGSTPERIAQIMGPPDRAQHAADIITDLLRSVQAGGPPGHGGGGGGGGGGRGRGRGQGNWNMGPPGGLQEFTFTVPTMKTGLIIGKGGETIKNISQQSGARIELQRNPPPNSDPNIKIFTVRGSPQQIDYARQLVEEKIGGPVSPMGGPHGPPGPHGGPSHGPPGPQGPPAPMGPYNPGPYGQGPPGPHGPPAPYQPQGWGNGYPHWQQGQPDPNKAAADANAAAWAAYYSQYQQQPQGPMTPTSAAPGTTQANGQGQGQPQQDYTKAWEEYYKKQGELSQAAPQAAAAATATQPGGQPDYSAAWAEYYRQQAAYYGQGAPQAMGGAPQAQQGQ
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0097159 (organic cyclic compound binding), GO:1901363 (heterocyclic compound binding), GO:0003676 (nucleic acid binding), GO:0003723 (RNA binding), GO:0003729 (mRNA binding), GO:0003730 (mRNA 3'-UTR binding)
Biological Process (BP): GO:0008150 (biological process), GO:0050789 (regulation of biological process), GO:0065007 (biological regulation), GO:0019222 (regulation of metabolic process), GO:0060255 (regulation of macromolecule metabolic process), GO:0010468 (regulation of gene expression)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Pyruvate kinase (A0A8M9NZ14)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR011037: Pyruvate kinase-like, insert domain superfamily (homologous_superfamily) [112-210]
- IPR015806: Pyruvate kinase, insert domain superfamily (homologous_superfamily) [112-215]
- IPR018209: Pyruvate kinase, active site (active_site) [261-273]
- IPR015795: Pyruvate kinase, C-terminal (domain) [408-522]
- IPR015793: Pyruvate kinase, barrel (domain) [38-371]
- IPR040442: Pyruvate kinase-like domain superfamily (homologous_superfamily) [42-381]
- IPR001697: Pyruvate kinase (family) [11-526]
- IPR036918: Pyruvate kinase, C-terminal domain superfamily (homologous_superfamily) [9-526]
- IPR015813: Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily (homologous_superfamily) [10-390]
Sequence:
MALPDSFIQKQQLDASMADTFLEHLCLLDIDQEPITARNTSIICTIGPASRSITKLQEMVKAGMNIARLNFSHGTHQYHAETIRNVREAVETLTSDPLYYRPVAIALDTKGPEIRTGLVKGRADAEVTLERGALVRVVTAECEREQTDGSVIWMDYPSLTRVLKKDSRIYIDDGLLALRVLEIGDSWLQARVENGGVLGSSKGVNLPGAELLDLPAVSERDRSDLQFGVEQQVDMIFASFIRCAEDVRAVRDALGPQGHDIKIISKVESRQGVRNFEQILQESDGVMVARGDLGIEIPAEKVFIAQKMMIGRCNSAGKPVICATQMLESMVHHARPTRAESSDVANAVLDGADCVMLSGETAKGHFPVEAVAMMHSICREAEAAIFHQQLFEELRRLTPLSSDPTEVTAIGAVESSYKCCAGAIIILTTSGRSAQLLSRYRPRCPIIAVTRNAQVARQSQLLRGVFPALFRAPPAEVWADDVDNRVTFAMDIGKARGFFRSGDMVIVVTGWSPGSGHTNIMRAVTVP
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0016740 (transferase activity), GO:0016772 (transferase activity, transferring phosphorus-containing groups), GO:0016773 (phosphotransferase activity, alcohol group as acceptor), GO:0004743 (pyruvate kinase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0032501 (multicellular organismal process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0048731 (system development), GO:0048513 (animal organ development), GO:0048732 (gland development), GO:0061008 (hepaticobiliary system development), GO:0001889 (liver development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005737 (cytoplasm), GO:0005622 (intracellular anatomical structure)
Protein: Gephyrin isoform X3 (A0A8M9PKR1)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR036688: MoeA, C-terminal, domain IV superfamily (homologous_superfamily) [817-899]
- IPR038987: Molybdopterin biosynthesis protein MoeA-like (family) [394-899]
- IPR005111: MoeA, C-terminal, domain IV (domain) [821-895]
- IPR005110: MoeA, N-terminal and linker domain (domain) [476-618]
- IPR001453: MoaB/Mog domain (domain) [15-808]
- IPR036135: MoeA, N-terminal and linker domain superfamily (homologous_superfamily) [476-625]
- IPR036425: MoaB/Mog-like domain superfamily (homologous_superfamily) [1-757]
- IPR008284: Molybdenum cofactor biosynthesis, conserved site (conserved_site) [81-739]
Sequence:
MASDGMILTNHDHQIRVGILTVSDSCFRNLAEDRSGINLKDLVHDPSLLGGIISAYKIVPDEIDEIKEILVDWCDEKELNLILTTGGTGFAPRDVTPEATREVIEREAPGMALAMLMGSLNVTPLGMLSRPVCGIRGKTLIINLPGSKKGSQECFQFILPALPHAIDLLRDAIVKVKEVHDALEDLPSPPPPLSPPPTTSPHKQTEDKGVQCEEEDEEKKDSGVASTEDSGSSHITAAAIAAKSMTSHLSHAVVMAKGGQPLSGFIPSTSIPSHFTCSCSDTIPESIISRGVQVLPRDTASLSTTPSESPCAQQSRLSTASCPTPKARLTSCSSTYSVTEASRREFRAHLDDVISHKSRYSTLDQVQSRCSSKENILRASHSAVDITKVARRHRMSPFPLTSMDKAFITVLEMTPVLGTEIINYRGPYTGDLAPLPRKGIWRQNGSSWRKIPLCTGAEAKAERRALANAAHTPKYCTDGMGRVLAQDVYAKDNLPPFPASVKDGYAVRAADGPGDRFIIGESQAGEQPTLTVMPGQVMRVTTGAPIPCGADAVVQVEDTELLRESEDGTEELEVRILVQARPGQDIRPIGHDIKRGECVLAKGTHMGPSEIGLLATVGVTEVEVQKFPVVAVMSTGNELLNPEDDLHPGKIRDSNRSTLLATIQEHGYPTINLGIVGDNPDDLLNALNEGISRADVIITSGGVSMGEKDYLKQVLDIDLHAQIHFGRVFMKPGLPTTFATLDIDGARKLIFALPGNFTYRDTGATLLEAVPLSDTEACRMPVPPPPRGSNPVSAVVTCNLFVIPALRKMQGILDPRPTIIKARLSCDVKLDPRPEYHRCILTWHHQEPLPWAQSTGNQMSSRLMSMRSANGLLMLPPKTEQYVELHKGEVVDVMVIGRL
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0003824 (catalytic activity), GO:0016661 (oxidoreductase activity, acting on other nitrogenous compounds as donors), GO:0008940 (nitrate reductase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0009987 (cellular process), GO:0051179 (localization), GO:0051641 (cellular localization), GO:0071840 (cellular component organization or biogenesis), GO:0033036 (macromolecule localization), GO:0070727 (cellular macromolecule localization), GO:0016043 (cellular component organization), GO:0051668 (localization within membrane), GO:0008104 (protein localization), GO:0099173 (postsynapse organization), GO:0034330 (cell junction organization), GO:0061024 (membrane organization), GO:0072657 (protein localization to membrane), GO:0001941 (postsynaptic membrane organization), GO:0050808 (synapse organization), GO:0043113 (receptor clustering), GO:0072578 (neurotransmitter-gated ion channel clustering)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0042995 (cell projection), GO:0043226 (organelle), GO:0120025 (plasma membrane bounded cell projection), GO:0043227 (membrane-bounded organelle), GO:0005929 (cilium)
Protein: Chordin-like protein 2 isoform X1 (A0A8M3AWU4)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
Sequence:
MKKRMTCLKHFFILVTMRCFVQGETEALRPGKNVFCTFKEKTYRPGDSWHPYLEPFGFMFCMRCTCTEPGLVKCNSIKCPSLRCENPVTNSQQCCPRCADEHRTPAGLRAPIKTCRYNGSIYQTGETFANHELFPTRQSNQCVMCTCSNGNIFCALKSCQPITCSSPVPVPDTCCLVCKESAIDINSALFEDGGQQLNRGARHSVDQCAADQVRGRSVRATPSTLRGSPRGLNLQTLHLKGASETTVKILLQRKHQRVVRPILMVTSGIRCWGRFWSAFCAHAGTAFKNARESRAPTSIRANIP
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0032501 (multicellular organismal process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0007389 (pattern specification process), GO:0003002 (regionalization), GO:0009798 (axis specification), GO:0009953 (dorsal/ventral pattern formation), GO:0009950 (dorsal/ventral axis specification)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005576 (extracellular region)
Protein: Receptor-type tyrosine-protein phosphatase epsilon isoform X4 (A0A8M1RFA7)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR029021: Protein-tyrosine phosphatase-like (homologous_superfamily) [44-633]
- IPR000242: Tyrosine-specific protein phosphatase, PTPase domain (domain) [73-625]
- IPR000387: Tyrosine-specific protein phosphatases domain (domain) [253-614]
- IPR016130: Protein-tyrosine phosphatase, active site (active_site) [272-572]
- IPR003595: Protein-tyrosine phosphatase, catalytic (domain) [231-622]
- IPR050348: Protein-Tyrosine Phosphatase (family) [32-433]
Sequence:
MKKSSSFRWLKNQRKAVITAVDKKVPNGILEEQEQQTVVLLPRSPSTSKTYLPIPVDNLEEEYRIRSADDGKLFREEYSSLPGGSIQGTCEEANKEENKEKNRYPNILPYDQSRVILTPMDGVTCSDYINASYIDGYKDKNKFIAAQGPKQDTTADFWRMIWEQKSSTIVMLTNLKERKEDKCYQYWPDQGCWTYGNVRVAVEDFTVLVDYTIRKFCVQYQASDGSKSPRLVTQLHFTSWPDFGVPFSPIGMLKFLKKVKQVNPSYAGPIVVHCSAGVGRTGTFIVIDAMIDMMHTEQKVDVFGFVSRIREQRSQLIQTDLQYSFVYQALLEYFLYGDTELDVSSLEGHLQKLHNTNAPLDRVGLEEEFKKLTNMRIMKENMRTGNLPANMKKNRVLQIIPYDFNRVILSMKRGQEFTDYVNASFIDGYRQKDYYIATQGPLVHTVDDFWRMAWEWKCHSIVMLTELQERDQDKCFQYWPSEDSVTYGEFSVEIKGDTLCETFSLRDLVLTHTPEKQTRLVRHFHFHGWPEIGIPAEGKGMIDIIAAVQKQQQQSGNHPIIVHCSAGAGRTGTFIALSNILERVKAEGLLDVFQTVKSLRMQRPHMVQTVEQYDFCYRVVQDFVDIFSDYANFK
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0140096 (catalytic activity, acting on a protein), GO:0016787 (hydrolase activity), GO:0004721 (phosphoprotein phosphatase activity), GO:0016788 (hydrolase activity, acting on ester bonds), GO:0042578 (phosphoric ester hydrolase activity), GO:0004725 (protein tyrosine phosphatase activity), GO:0016791 (phosphatase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0032501 (multicellular organismal process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0009653 (anatomical structure morphogenesis), GO:0009888 (tissue development), GO:0009790 (embryo development), GO:0048598 (embryonic morphogenesis), GO:0048729 (tissue morphogenesis), GO:0060429 (epithelium development), GO:0007369 (gastrulation), GO:0060027 (convergent extension involved in gastrulation), GO:0002009 (morphogenesis of an epithelium), GO:0060026 (convergent extension)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0005886 (plasma membrane), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Tropomyosin beta chain (A0A8M2B1Q8)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Cytoplasm, cytoskeleton
InterPro domains:
- IPR000533: Tropomyosin (family) [8-247]
Sequence:
MASITSIEAVKRKIQTLQQQADDAEDRAEMLQREVDLERQCRERAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRATKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGELERSEERAEVAEAKSGDLEEELKNVTNNLKSLEAQAEKYSTKEDKYEEEIRVLTDKLKEAETRAEFAERSVAKLEKTIDDLEDEVYAQKLKGKALSEELDLALNDMTTL
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding), GO:0008092 (cytoskeletal protein binding), GO:0003779 (actin binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0009987 (cellular process), GO:0048869 (cellular developmental process), GO:0048856 (anatomical structure development), GO:0071840 (cellular component organization or biogenesis), GO:0009653 (anatomical structure morphogenesis), GO:0030029 (actin filament-based process), GO:0048646 (anatomical structure formation involved in morphogenesis), GO:0032989 (cellular component morphogenesis), GO:0016043 (cellular component organization), GO:0061061 (muscle structure development), GO:0044085 (cellular component biogenesis), GO:0030036 (actin cytoskeleton organization), GO:0010927 (cellular component assembly involved in morphogenesis), GO:0048468 (cell development), GO:0030154 (cell differentiation), GO:0022607 (cellular component assembly), GO:0042692 (muscle cell differentiation), GO:0006996 (organelle organization), GO:0030239 (myofibril assembly), GO:0031032 (actomyosin structure organization), GO:0055001 (muscle cell development), GO:0097435 (supramolecular fiber organization), GO:0070925 (organelle assembly), GO:0007010 (cytoskeleton organization), GO:0014866 (skeletal myofibril assembly), GO:0051146 (striated muscle cell differentiation), GO:0055002 (striated muscle cell development), GO:0140694 (non-membrane-bounded organelle assembly)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0030017 (sarcomere), GO:0005737 (cytoplasm), GO:0036379 (myofilament), GO:0099080 (supramolecular complex), GO:0099081 (supramolecular polymer), GO:0043292 (contractile fiber), GO:0043229 (intracellular organelle), GO:0005865 (striated muscle thin filament), GO:0043228 (non-membrane-bounded organelle), GO:0099512 (supramolecular fiber), GO:0030016 (myofibril), GO:0043232 (intracellular non-membrane-bounded organelle), GO:0005856 (cytoskeleton), GO:0015629 (actin cytoskeleton)
Protein: ubiquitinyl hydrolase 1 (A0A8M2B4T1)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Cytoplasm. Nucleus
InterPro domains:
- IPR002653: Zinc finger, A20-type (domain) [875-910]
- IPR051346: OTU Domain-Containing Deubiquitinase (family) [83-682]
- IPR003323: OTU domain (domain) [177-357]
Sequence:
MTLDMDAVLSDFVRSTGAEPGLARDLLEGKNWDLSAALSDFEQLRQVHAGSLSCSFVEESEYPSIEKEMARTGRPLLHRQDEAVQAATEKRLSRGISHASSTIVSLARSHVSSTGGTNEQLLDTPLCTFQLPDLTVYRDDFRGFIERDLIEQSMMVALEQAGRLNWWTRLGTGCQSLLPLATSGDGNCLLHAASLGMWGFHDRDLMLRKSLYALMDHGQEREALKRRWRWQQTMQNKESGLVYTEEEWQKEWNELLKLASSEPRIHYSTNGSSGAESQEEPVYESLEEFHVFVLAHVLRRPIVVVADTMLRDSGGEAFAPIPFGGIYLPLEVPANKCHRSPLVLAYDQAHFSALVSMEQKDSSKEQVVIPLTDSDHKMLPLHFAVDPGADWEWGKDDNDNVMLASVTLSLEAKLHLLHCYMTVTWLPLPCEQAPLAQPESPTASAGEDARTPPDSGESDKESVSSSSNGNGDSSTTGTSGTTGKTSGGSSSSSSSSSNSSGGTTGTIGKEKGKKDKEKDKDKDKKRADSVANKLGSFGKSLGSKLKKNVGGLMPGKNASGTGGKQEGQEKKKGSLRGRKGSKDSSPSIQTGSEDSGKGSPSSTSERQNGGYSSESDPFKYSSDVKVSLSILRSAMQGERKYIFSALLTTSNRQPFQEEMIQRYLVDAEERFHAEQEQRREAERKAAGGLASTTGPQMKKDGPELSYRGFESKEEVTDSSPPNFNALKSSSFSPVMYSGVVPIPRHTFIDHSPSPMTQHLHMHHGYMDTRRQLAGGSPSSYPGLPSYATLPRHCPLAQGPPHAQYHPPSASLGSPSRIITPCLTSFPQEHDPTDYPSEPSGAYTNGLRDLRSTLDSRNGPMPVRHYSLGSAGGLANLQSSKCRTPTCNYYGHPETGNYCSYCYREELKRRETEPAIHRF
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0140096 (catalytic activity, acting on a protein), GO:0016787 (hydrolase activity), GO:0008233 (peptidase activity), GO:0008234 (cysteine-type peptidase activity), GO:0019783 (ubiquitin-like protein peptidase activity), GO:0101005 (deubiquitinase activity), GO:0004843 (cysteine-type deubiquitinase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0050789 (regulation of biological process), GO:0009987 (cellular process), GO:0023052 (signaling), GO:0065007 (biological regulation), GO:0051716 (cellular response to stimulus), GO:0007154 (cell communication), GO:0007165 (signal transduction), GO:0050794 (regulation of cellular process), GO:0007166 (cell surface receptor signaling pathway), GO:0007219 (Notch signaling pathway)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005737 (cytoplasm), GO:0005622 (intracellular anatomical structure)
Protein: RNA helicase (A0A8M9QJR9)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Cytoplasm
InterPro domains:
- IPR001650: Helicase, C-terminal domain-like (domain) [574-735]
- IPR027417: P-loop containing nucleoside triphosphate hydrolase (homologous_superfamily) [295-740]
- IPR011545: DEAD/DEAH-box helicase domain (domain) [359-550]
- IPR014014: RNA helicase, DEAD-box type, Q motif (domain) [335-363]
- IPR000629: ATP-dependent RNA helicase DEAD-box, conserved site (conserved_site) [505-513]
- IPR014001: Helicase superfamily 1/2, ATP-binding domain (domain) [354-578]
Sequence:
MSHVVVDGSHGLDQQLAVLDLNSADGQGVGTGRRYIPPHLRNKDASKNVSPKQYPQSWHPEGNQRHRQNYPTGWNDFRTGNYLEKADLLLRSSICEGMVVLSALYFCLGSQRFASQELAFYHTYTSGWPDRCASPARTDSSVATDGNEDTASVISWADRCDSPGWDGSRTNGFVNGYHDSRMNGTANFARGPLRNDRGGRGGFRGNRNGASFNQPVHNAGYGTYENKDGGWNSVVNRDAYASFGGRSDRGKSAFFNDRGASSRGRYERGGFGGGTGGNSRWVEESRDEEDWSKPMPPNERLEHELFSASNTGINFEKYDDIPVEATGTNSPGHIESFHDVDMGEIIMGNITLSRYTRPTPVQKYAIPIIKTKRDLMACAQTGSGKTAAFLLPVLSQIYSEGPGEALQATKASTQQENGKYVRRKQYPISLVLAPTRELALQIYDEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDYCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGSRQTMMFSATFPKEIQILARDFLEEYIFLAVGRVGSTSENITQKVVWVEENDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCPIMVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFYNDKNSNITKDLLDILVEAKQEVPSWLENLAYEHQHKSTNRGRPKRFSGGFGARDYRQMPGGGNTFGNRGARNTGGHGGNRGFGGNKGGFGSFGGDSYGGTYGNYGGNYTQVDWWGN
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0097159 (organic cyclic compound binding), GO:1901363 (heterocyclic compound binding), GO:0003676 (nucleic acid binding), GO:0003723 (RNA binding), GO:0003729 (mRNA binding), GO:0003730 (mRNA 3'-UTR binding)
Biological Process (BP): GO:0008150 (biological process), GO:0040011 (locomotion), GO:0002376 (immune system process), GO:0009987 (cellular process), GO:0050896 (response to stimulus), GO:0009605 (response to external stimulus), GO:0051716 (cellular response to stimulus), GO:0048870 (cell motility), GO:0042221 (response to chemical), GO:0050900 (leukocyte migration), GO:0042330 (taxis), GO:0097529 (myeloid leukocyte migration), GO:0006935 (chemotaxis), GO:0030595 (leukocyte chemotaxis), GO:0070887 (cellular response to chemical stimulus), GO:0016477 (cell migration), GO:0071621 (granulocyte chemotaxis), GO:0060326 (cell chemotaxis), GO:0097530 (granulocyte migration), GO:1990266 (neutrophil migration), GO:0030593 (neutrophil chemotaxis)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0099080 (supramolecular complex), GO:0043229 (intracellular organelle), GO:0035770 (ribonucleoprotein granule), GO:0036464 (cytoplasmic ribonucleoprotein granule), GO:0045495 (pole plasm), GO:0043228 (non-membrane-bounded organelle), GO:0043186 (P granule), GO:0060293 (germ plasm), GO:0043232 (intracellular non-membrane-bounded organelle)
Protein: Sodium-dependent serotonin transporter isoform X2 (A0A8M3APU9)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Membrane; Multi- pass membrane protein
InterPro domains:
Sequence:
MSPGPTTQSLPLKSFMCKCIRQVLQVHLSPGLHQLGWVSWQLALCLLFIFTVVYFSIWKGVKTSGKVVWVTATFPYLVLLILLIRGATLPGAWRGVVFYLKPDWKKLLTTTVWLDAAAQIFFSLGPGFGVLLAFASYNPFHNNCYKDALITSSVNCLTSFLSGFVIFTVLGYMAEMRQQGVETVAKDAGPSLLFIIYAEAIANMPAATFFAIIFFLMIIMLGLDSTFAGLEGVITAMLDEFPHLLARRREWFVLGLVCVCYLGALSTLTYGGAFVVKLFEEYATGPAVITVVFLEVIAVSWFYGTTRFCNDVQLMLGFAPGLFWRVCWIAICPCFLLFIIVSFLAFPPEVKLFDYLYPFWTTVLGYCIGVSSFICVPSYMVYHLVTTKGTFQQRLLKGITPEAPGSSGPQRDTIVITNAV
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005215 (transporter activity), GO:0022857 (transmembrane transporter activity), GO:0008514 (organic anion transmembrane transporter activity), GO:0005342 (organic acid transmembrane transporter activity), GO:1901702 (salt transmembrane transporter activity), GO:0046943 (carboxylic acid transmembrane transporter activity), GO:0008324 (monoatomic cation transmembrane transporter activity), GO:0015081 (sodium ion transmembrane transporter activity), GO:0015179 (L-amino acid transmembrane transporter activity), GO:0015175 (neutral L-amino acid transmembrane transporter activity), GO:0051301 (cell division)
Biological Process (BP): GO:0008150 (biological process), GO:0051179 (localization), GO:0051234 (establishment of localization), GO:0006810 (transport), GO:0071702 (organic substance transport), GO:0071705 (nitrogen compound transport), GO:0015844 (monoamine transport), GO:0015850 (organic hydroxy compound transport), GO:0006837 (serotonin transport)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0005886 (plasma membrane)
Protein: GRB2-associated-binding protein 1 isoform X3 (A0A8M6YVD8)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR046355: GRB2-associated-binding protein 1-4-like (family) [1-739]
- IPR001849: Pleckstrin homology domain (domain) [5-118]
- IPR011993: PH-like domain superfamily (homologous_superfamily) [2-130]
Sequence:
MSGGDVVYSGWLRKSPPEKKLRRYAWKKRWFVLRSGRLSGDPDVLEYYKNDHAKKPIRVIDLNLCEQVDAGLSFNKKDLEHSFIFDIKTIDRIFYLVAETEEDMNKWVRNICEICGFNPTDTEDSAKVSHHVNVPGGLVVDMAPSGGLGGALGASALANLPPPYQPVSIRQLGSSSSLDEPQDYLWLLNCESKKPEPNSLVAPLCLGEEEQEYLLLEECESRSAAHDSQAHGDCSKSTSSEPDCNDNLPSHYTPTSSTSKNAPVNGFFSTQHPTGLYDSPPLRGQSLSADSQGLYHLPRSYSQDTVLLPKSATSPPIPDGEPGELYVFNTPGRKPSLEAHLRNLSVSYDIPPTPGSNSTYQVPRTAGVEAVSGSTEVIPPPRPPKPSVSGGSVPPERSPTDTYVVPRSVSETDTNYCVPTSAGGNKALRSNTIGTVDSSRLRKDYGSQDCYDIPRPFPSEKSCSFDFNESFNNYFKNKGMVPVGGVSTEEMDENYVPMSVHSLSHQRSGSLSEPIQEPNYVPMTPGTVEFSSLGKQVPPPAHMGFRSSPKTPPRRPIPISECQPPPIDRNLKPDRKVKPAPLEIKPVSEWEEYTAPVRSPVTRSFTRDPSRFTVAPRPSSGQSTASSSDSDECDENYVTMQANMSSDEPNKLGAPMNADGGGSPMVKPKGDKQVEYLDLDLDPGKSTPPRKKKNNGTGISASDERVDYVLVDQQRTQALKSTREAWSDGRQSTEDTPTKGAK
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0048856 (anatomical structure development), GO:0009653 (anatomical structure morphogenesis), GO:0009888 (tissue development), GO:0048729 (tissue morphogenesis), GO:0060429 (epithelium development), GO:0002009 (morphogenesis of an epithelium), GO:0002011 (morphogenesis of an epithelial sheet), GO:0090504 (epiboly)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005829 (cytosol), GO:0005622 (intracellular anatomical structure), GO:0005737 (cytoplasm)