lokahq/bioreason-rl huggingface dataset:
Protein: Large ribosomal subunit protein eL33 (A0A8L2QJQ6)
Organism: Rattus norvegicus (Rat)
InterPro domains:
- IPR018266: Large ribosomal subunit protein eL33, conserved site (conserved_site) [72-93]
- IPR038661: Large ribosomal subunit protein eL33 superfamily (homologous_superfamily) [1-110]
- IPR001780: Large ribosomal subunit protein eL33 (family) [4-110]
- IPR009000: Translation protein, beta-barrel domain superfamily (homologous_superfamily) [5-104]
Sequence:
MSGRLWCKAIFAGYKPGLLNQREYTALLKIEGVYARDETEFYLGKRCAYVYKAKNNTVTPGGKPNKTRVIWGKVTRAHGNSGVVRAKFQSNLPAKAIGHRIRVMLYPSQI
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0044877 (protein-containing complex binding), GO:0043021 (ribonucleoprotein complex binding)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0032502 (developmental process), GO:0009987 (cellular process), GO:0032501 (multicellular organismal process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0042221 (response to chemical), GO:0009719 (response to endogenous stimulus), GO:0051716 (cellular response to stimulus), GO:0070887 (cellular response to chemical stimulus), GO:0048731 (system development), GO:0048513 (animal organ development), GO:0071495 (cellular response to endogenous stimulus), GO:1901700 (response to oxygen-containing compound), GO:0031099 (regeneration), GO:0010033 (response to organic substance), GO:0009725 (response to hormone), GO:0031100 (animal organ regeneration), GO:0032870 (cellular response to hormone stimulus), GO:1901654 (response to ketone), GO:0071310 (cellular response to organic substance), GO:0033993 (response to lipid), GO:0048732 (gland development), GO:0048545 (response to steroid hormone), GO:0014070 (response to organic cyclic compound), GO:1901701 (cellular response to oxygen-containing compound), GO:0061008 (hepaticobiliary system development), GO:1901655 (cellular response to ketone), GO:0071548 (response to dexamethasone), GO:0001889 (liver development), GO:0071383 (cellular response to steroid hormone stimulus), GO:0031960 (response to corticosteroid), GO:0097421 (liver regeneration), GO:0071407 (cellular response to organic cyclic compound), GO:0071396 (cellular response to lipid), GO:0071549 (cellular response to dexamethasone stimulus), GO:0051384 (response to glucocorticoid), GO:0071384 (cellular response to corticosteroid stimulus), GO:0071385 (cellular response to glucocorticoid stimulus)
Cellular Component (CC): GO:0005575 (cellular component), GO:0032991 (protein-containing complex), GO:0110165 (cellular anatomical entity), GO:1990904 (ribonucleoprotein complex), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005829 (cytosol), GO:0005737 (cytoplasm), GO:0044391 (ribosomal subunit), GO:0043229 (intracellular organelle), GO:0022626 (cytosolic ribosome), GO:0043228 (non-membrane-bounded organelle), GO:0015934 (large ribosomal subunit), GO:0043232 (intracellular non-membrane-bounded organelle), GO:0022625 (cytosolic large ribosomal subunit), GO:0005840 (ribosome)
Protein: Solute carrier organic anion transporter family, member 6c1 (A6JR55)
Organism: Rattus norvegicus (Rat)
Subcellular location: Membrane; Multi- pass membrane protein
InterPro domains:
- IPR004156: Organic anion transporter polypeptide (family) [64-696]
- IPR002350: Kazal domain (domain) [479-534]
- IPR036058: Kazal domain superfamily (homologous_superfamily) [481-532]
- IPR036259: MFS transporter superfamily (homologous_superfamily) [83-624]
Sequence:
MGQVQNKKPDAKKDDKHNQETEGLKKIDTYLRTIPTVTKKFKGRPQKKRSPTSAELLLDPKYSASKEGPFGLGPLVFPCLQRFNNIDCFMIFFIASVLIHGALFALADMILNLYHSLLTLSKRELYFMDFSGYIVSSLVAIFVAHFGGKGNRTKWIAAACILMAFGSILLGFPFSKYEIMKSGGQRVELCVEENKRRNIHCVTNSNPDRTKCICFFIIGQCLNGIAGMPIYILGKTFIFDHVPTRSAGFYLALGHSAHLMGYFLGIFGGMKNLSPPPKEKLSAVDSAKIHLLLQFGWWKTFLFVAAISFSVFLVLLCFPTSLPGAHKLKLAKRKEPPTFDKRLKDQKIQPRFKGFVFAIWYMLRNPLLMTQAMCKVSESFAFHTSLEFLPYHLQTQFSITPQIASMLTGLFVIPGGVIGHFLGGLIVDRLEMTNKNKLKFSLVTSVVSVALFLLIFFVECETTKFAGINEDYDGLGKLGNLTAGCNYHCACTTSLYSSVCGRDEKEYFSPCFAGCSATKVQQNEKTYYNCSCIKEGLTTSDADGHFIDATDGTCNSNCLTLPLFFAFYFSATVFSTMCSTPIILIILQSVPANFSSLGLGVTVAITKFTASVPEPALFGTASSVACKFWDINACGVREKCWIYNKTTLVYVFIGIWVSFKLFTALLNIYAIHIYDYVVKGKISDSKTTHVKASKAQKERRA
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005215 (transporter activity), GO:0022857 (transmembrane transporter activity), GO:0008514 (organic anion transmembrane transporter activity)
Biological Process (BP): GO:0008150 (biological process), GO:0051179 (localization), GO:0051234 (establishment of localization), GO:0006810 (transport), GO:0071702 (organic substance transport), GO:0015711 (organic anion transport)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0005886 (plasma membrane)
Protein: RCG33209 (A6HGH9)
Organism: Rattus norvegicus (Rat)
Subcellular location: Membrane; Single-pass type I membrane protein
InterPro domains:
- IPR048285: Integrin alpha, second immunoglobulin-like domain (domain) [816-948]
- IPR013519: Integrin alpha beta-propellor (repeat) [450-686]
- IPR028994: Integrin alpha, N-terminal (homologous_superfamily) [355-671]
- IPR032695: Integrin domain superfamily (homologous_superfamily) [671-949]
- IPR036465: von Willebrand factor A-like domain superfamily (homologous_superfamily) [192-383]
- IPR013517: FG-GAP repeat (repeat) [507-611]
- IPR002035: von Willebrand factor, type A (domain) [195-382]
- IPR000413: Integrin alpha chain (family) [451-1146]
- IPR018184: Integrin alpha chain, C-terminal cytoplasmic region, conserved site (conserved_site) [1139-1152]
Sequence:
MKWFFHALLCVASLKPLGAFNVDVDWSWVTALQPGAPSVLNSLLHQDPSNNQTCLLVARRSSNRNSAVLYRCATSIIPDEIGCQPVEHILMPKGRYQGVTLVRNHNGVLVCIQVQSRKPRSLNSELTGACSLLTPNLDLQAQAYFSDLEGVLDLGASVNSGDYYGSKGGSTGEETKSARRLRRQAVEEEDEEEAGTEIAIVLDGSGSIEPSDFQKAKDFISTMMRNFYEKCFECNFALVQYGGVIQTEFDLLDSRDINASLAKVQSIVQVKEVTKTASAMQHVLDNIFIPSRGSRKKALKVMVVLTDGDIFRDPLNLTTVISSSKMQGVVRFAIGVGNAFENNNTYRELKLIASDPKAAHTFKVTNYSALDGLLSKLQQRIIHMEGTVGDTLQYQLAQTGFSAQILDKGQVLLGTVGAFNWSGGALLYNTQNGRGRFLNQTAKEDFRAAQYSYLGYSVAALHKAHGVSYVAGAPRHKLRGAVFELQKEDGEETFMRRIEGEQMGSYFGSVLCPVDINMDGITDFLLVAAPFYHIRGEEGRVYVYRVHEQDAPFSLVYTLSGYPGLTSSRFGFAMAAVGDINQDKFTDVAIGAPLEGFGAGDGASYGSVYIYNGHSGGLHASPSQQIRASSVALGLYYFGMSVSGGLDFSGDDLADITVGSQDVAVVLRSRPVVDLTVSMTFTPDALPMAFKDKMDVELCFKVDSSAVPSEPGLRGMSLNFTVDVDVTKQKQRLQCADRSCCQSCLMKWSGGSSLCEHFGLISTEEELCEDDCFSNITIKVSYEFQTSEERRNHPNPILDHYKEPSAIFQLPYEKDCKNKVFCIAEIQLTTAISQQDLVVGITKEVTMNISLTNSGEDSYMTNMALNYPRNLQFKKIQKPLSPDIQCDDPKPVASVLVMNCKIGHPILKRSSVNVSVTWQLEESIFPNRTADITVTISNSNEKSLARETHSLQFRHAFIAVLSRPSVMYMNTSQSSSDHKEFFFNVHGENHFGAVFQLQICVPITLRDLQIIRVKHLTKTQAHTECTQSQEPTCGSDPVQNVEEWHSVICAITSNKENVTVAAEISMGHTKQLLRDISELQILGEISFNKSLYEGLNAENHRTKITVIFLKEEKPHSLPLIIGSSIGGLLVLVVIIAILFKCGFFKRKYKQLNLESVRKAQLKSDSLLED
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0044877 (protein-containing complex binding)
Biological Process (BP): GO:0008150 (biological process), GO:0009987 (cellular process), GO:0007155 (cell adhesion)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0009986 (cell surface)
Protein: Integrin alpha E2 (O88341)
Organism: Rattus norvegicus (Rat)
Subcellular location: Membrane; Single-pass type I membrane protein
InterPro domains:
- IPR048285: Integrin alpha, second immunoglobulin-like domain (domain) [814-946]
- IPR013519: Integrin alpha beta-propellor (repeat) [448-684]
- IPR028994: Integrin alpha, N-terminal (homologous_superfamily) [353-669]
- IPR032695: Integrin domain superfamily (homologous_superfamily) [669-947]
- IPR036465: von Willebrand factor A-like domain superfamily (homologous_superfamily) [190-381]
- IPR013517: FG-GAP repeat (repeat) [505-609]
- IPR002035: von Willebrand factor, type A (domain) [193-380]
- IPR000413: Integrin alpha chain (family) [449-1144]
- IPR018184: Integrin alpha chain, C-terminal cytoplasmic region, conserved site (conserved_site) [1137-1150]
Sequence:
TSFHALLCVASLKPLGAFNVDVDWSWVTALQPGAPSVLNSLLHQDPSNNQTCLLVARRSSNRNSAVLYQCATSIIPDEIGCQPVEHILMPKGRYQGVTLVRNHNGVLVCIQVQSRKPRSLNSELTGACSLLTPNLDLQAQAYFSDLEGVLDLGASVNSGDYYGSKGGSTGEETKSARRLRRQAVEEEDEEEAGTEIAIVLDGSGSIEPSDFQKAKDFISTMMRNFYEKCFECNFALVQYGGVIQTEFDLLDSRDINASLAKVQSIVQVKEVTKTASAMQHVLDNIFIPSRGSRKKALKVMVVLTDGDIFRDPLNLTTVISSSKMQGVVRFAIGVGNAFENNNTYRELKLIASDPKAAHTFKVTNYSALDGLLSKLQQRIIHMEGTVGDTLQYQLAQTGFSAQILDKGQVLLGTVGAFNWSGGALLYNTQNGRGRFLNQTAKEDFRAAQYSYLGYSVAALHKAHGVSYVAGAPRHKLRGAVFELQKEDGEETFMRRIEGEQMGSYFGSVLCPVDINMDGITDFLLVAAPFYHIRGEEGRVYVYRVHEQDAPFSLVYTLSGYPGLTSSRFGFAMAAVGDINQDKFTDVAIGAPLEGFGAGDGASYGSVYIYNGHSGGLHASPSQQIRASSVALGLYYFGMSVSGGLDFSGDDLADITVGSQDVAVVLRSRPVVDLTVSMTFTPDALPMAFKDKMDVELCFKVDSSAVPSEPGLRGMSLNFTVDVDVTKQKQRLQCADRSCCQSCLMKWSGGSSLCEHFGLISTEEELCEDDCFSNITIKVSYEFQTSEERRNHPNPILDHYKEPSAIFQLPYEKDCKNKVFCIAEIQLTTAISQQDLVVGITKEVTMNISLTNSGEDSYMTNMALNYPRNLQFKKIQKPLSPDIQCDDPKPVASVLVMNCKIGHPILKRSSVNVSVTWQLEESIFPNRTADITVTISNSNEKSLARETHSLQFRHAFIAVLSRPSVMYMNTSQSSSDHKEFFFNVHGENHFGAVFQLQICVPITLRDLQIIRVKHLTKTQAHTECTQSQEPTCGSDPVQNVEEWHSVICAITSNKENVTVAAEISMGHTKQLLRDISELQILGEISFNKSLYEGLNAENHRTKITVIFLKEEKPHSLPLIIGSSIGGLLVLVVIIAILFKCGFFKRKYKQLNLESVRKAQLKSDSLLED
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0044877 (protein-containing complex binding)
Biological Process (BP): GO:0008150 (biological process), GO:0009987 (cellular process), GO:0007155 (cell adhesion)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0009986 (cell surface)
Protein: Receptor-associated protein of the synapse (Predicted), isoform CRA_b (A6HN99)
Organism: Rattus norvegicus (Rat)
InterPro domains:
- IPR019734: Tetratricopeptide repeat (repeat) [6-266]
- IPR001237: 43kDa postsynaptic protein (family) [3-42]
- IPR018293: 43kDa postsynaptic, conserved site (conserved_site) [2-10]
- IPR052480: Receptor-associated synaptic protein (family) [1-178]
- IPR011990: Tetratricopeptide-like helical domain superfamily (homologous_superfamily) [2-291]
- IPR013083: Zinc finger, RING/FYVE/PHD-type (homologous_superfamily) [304-351]
- IPR019568: Rapsyn, myristoylation/linker region, N-terminal (domain) [1-80]
- IPR001841: Zinc finger, RING-type (domain) [310-350]
Sequence:
MGQDQTKQQIEKGLQLYQSNQTEKALQVWMKVLEKGSDLVGRFRVLGCLVTAHSEMGRYKEMLKFAVVQIDTARELEDADFLLESYLNLARSNEKLCEFHKTISYCKTCLGLPGTRAGAQLGGQVSLSMGNAFLGLSLFQKALESFEKALRYAHNNDDTMLECRVCCSLGSFYAQVKESMKIALQHGDRPLQALCLLCFADIHRSRGDLETAFPRYDSAMSIMTEIGNRLGQVHVLLGVAKCWIARKVLDKALDAIEKAQDLAEEVGNKLSQLKLHCLSEGICRSKGLQRELRAHVVRFHECVEETELYCGLCGESIGEKNSRLQALPCSHIFHLRCLQNNGTRSCPNCRRSSMKPGFV
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding), GO:0005102 (signaling receptor binding), GO:0035254 (glutamate receptor binding), GO:0035255 (ionotropic glutamate receptor binding)
Biological Process (BP): GO:0008150 (biological process), GO:0065007 (biological regulation), GO:0051179 (localization), GO:0048518 (positive regulation of biological process), GO:0050789 (regulation of biological process), GO:0009987 (cellular process), GO:0051641 (cellular localization), GO:0023056 (positive regulation of signaling), GO:0050794 (regulation of cellular process), GO:0051234 (establishment of localization), GO:0023051 (regulation of signaling), GO:0033036 (macromolecule localization), GO:0048522 (positive regulation of cellular process), GO:0050806 (positive regulation of synaptic transmission), GO:0010646 (regulation of cell communication), GO:0070727 (cellular macromolecule localization), GO:0010647 (positive regulation of cell communication), GO:0099177 (regulation of trans-synaptic signaling), GO:0051668 (localization within membrane), GO:0051128 (regulation of cellular component organization), GO:0045184 (establishment of protein localization), GO:0072657 (protein localization to membrane), GO:0050804 (modulation of chemical synaptic transmission), GO:0008104 (protein localization), GO:0090150 (establishment of protein localization to membrane), GO:1902414 (protein localization to cell junction), GO:1903539 (protein localization to postsynaptic membrane), GO:1990778 (protein localization to cell periphery), GO:1903540 (establishment of protein localization to postsynaptic membrane), GO:1900073 (regulation of neuromuscular synaptic transmission), GO:0035418 (protein localization to synapse), GO:0062237 (protein localization to postsynapse)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0030054 (cell junction), GO:0045202 (synapse), GO:0031594 (neuromuscular junction)
Protein: Mediator of RNA polymerase II transcription subunit 11 (A6HG50)
Organism: Rattus norvegicus (Rat)
Function: Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional pre-initiation complex with RNA polymerase II and the general transcription factors
Subcellular location: Nucleus
InterPro domains:
- IPR019404: Mediator complex, subunit Med11 (family) [1-113]
Sequence:
MATYSLANERLRALEDIEREIGAILQNAGTAILELSKEKTNERLLDRQAAAFTASVQHVEAELSAQIRYLTQVATGQPHEGSSYSSRKDCQMALKRVDYARLKISDVARTCEQMLEN
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0016740 (transferase activity), GO:0140096 (catalytic activity, acting on a protein), GO:0019787 (ubiquitin-like protein transferase activity), GO:0004842 (ubiquitin-protein transferase activity), GO:0061659 (ubiquitin-like protein ligase activity), GO:0061630 (ubiquitin protein ligase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0006807 (nitrogen compound metabolic process), GO:0044238 (primary metabolic process), GO:0071704 (organic substance metabolic process), GO:0043170 (macromolecule metabolic process), GO:1901564 (organonitrogen compound metabolic process), GO:0019538 (protein metabolic process), GO:0036211 (protein modification process), GO:0043412 (macromolecule modification), GO:0070647 (protein modification by small protein conjugation or removal), GO:0032446 (protein modification by small protein conjugation), GO:0016567 (protein ubiquitination)
Cellular Component (CC): GO:0005575 (cellular component), GO:0032991 (protein-containing complex), GO:1902494 (catalytic complex), GO:0140535 (intracellular protein-containing complex), GO:1990234 (transferase complex), GO:0000151 (ubiquitin ligase complex)
Protein: Kallikrein i (A0A1R3UDT9)
Organism: Rattus norvegicus (Rat)
InterPro domains:
- IPR043504: Peptidase S1, PA clan, chymotrypsin-like fold (homologous_superfamily) [58-254]
- IPR009003: Peptidase S1, PA clan (homologous_superfamily) [14-259]
- IPR033116: Serine proteases, trypsin family, serine active site (active_site) [207-218]
- IPR001254: Serine proteases, trypsin domain (domain) [37-258]
- IPR001314: Peptidase S1A, chymotrypsin family (family) [64-218]
- IPR018114: Serine proteases, trypsin family, histidine active site (active_site) [74-79]
Sequence:
MESLASPFKMPTKMLTVKTLALCLILAKSAWSEDQDKVVHGGPCLKNSHPFQAALYTSGHLLCGGVLVGPQWVLTAAHCKKPNLEVYLGKHNLRQTETFQRQISVDRTIVHPRYNPQTHDNDIMMVHLKRPVKFSQRIQPLPLKKDCSEKNPDCQILGWGKMENGEFPDTIQCADVQLVSREECERAYPGKITRSMVCAGDKREGNDSCQGDSGGPLVCGGHLRGIVSWGDMPCGSKEKPGVYTDVCTHIRWIQNIIRNK
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0140096 (catalytic activity, acting on a protein), GO:0016787 (hydrolase activity), GO:0008233 (peptidase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0050789 (regulation of biological process), GO:0065007 (biological regulation), GO:0050794 (regulation of cellular process), GO:0051128 (regulation of cellular component organization), GO:0031344 (regulation of cell projection organization), GO:0120035 (regulation of plasma membrane bounded cell projection organization), GO:0010975 (regulation of neuron projection development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005576 (extracellular region), GO:0005615 (extracellular space)
Protein: RCG26455, isoform CRA_b (A0A8I6A8J5)
Organism: Rattus norvegicus (Rat)
InterPro domains:
- IPR056263: 26S proteasome regulatory subunit RPN11, C-terminal domain (domain) [228-307]
- IPR050242: JAMM/MPN+ metalloenzymes, peptidase M67A (family) [26-306]
- IPR037518: MPN domain (domain) [31-166]
- IPR000555: JAB1/MPN/MOV34 metalloenzyme domain (domain) [27-165]
Sequence:
MDRLLRLGGGMPGLGQGPPTDAPAVDTAEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVRVIDVFAMPQSGTGVSVEAVDPVFQAKMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALSERAVAVVVDPIQSVKGKVVIDAFRLINANMMVLGHEPRQTTSNLGHLNKPSIQALIHGLNRHYYSITINYRKNELEQKMLLNLHKKSWMEGLTLQDYSEHCKHNESVVKEMLELAKNYNKAVEEEDKMTPEQLAIKNVGKQDPKRHLEEHVDVLMTSNIVQCLAAMLDTVVFK
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0050896 (response to stimulus), GO:0042221 (response to chemical), GO:0010033 (response to organic substance), GO:1901700 (response to oxygen-containing compound), GO:0097305 (response to alcohol), GO:0045471 (response to ethanol)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0042221 (response to chemical), GO:0010033 (response to organic substance), GO:1901700 (response to oxygen-containing compound), GO:0097305 (response to alcohol), GO:0045471 (response to ethanol)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0032991 (protein-containing complex), GO:0005829 (cytosol), GO:1902494 (catalytic complex), GO:0005622 (intracellular anatomical structure), GO:0005737 (cytoplasm), GO:0140535 (intracellular protein-containing complex), GO:1905368 (peptidase complex), GO:0031597 (cytosolic proteasome complex), GO:0000502 (proteasome complex), GO:1905369 (endopeptidase complex)
Protein: Ganglioside-induced differentiation-associated-protein 1 (Predicted) (A6JF92)
Organism: Rattus norvegicus (Rat)
InterPro domains:
- IPR004045: Glutathione S-transferase, N-terminal (domain) [24-105]
- IPR010987: Glutathione S-transferase, C-terminal-like (domain) [157-309]
- IPR036282: Glutathione S-transferase, C-terminal domain superfamily (homologous_superfamily) [202-300]
- IPR040079: Glutathione transferase family (family) [27-286]
- IPR034336: Ganglioside-induced differentiation-associated protein 1, C-terminal domain (domain) [179-289]
- IPR036249: Thioredoxin-like superfamily (homologous_superfamily) [24-105]
Sequence:
MARKQDEARSGVPLRAQGPPAAEVRLILYHWTHSFSSQKVRLVIAEKALKCEEHDVSLPLSEHNEPWFMRLNSTGEVPVLIHGENIICEATQIIDYLEQTFLDERTPRLMPDEGSMYYPRVQHYRELLDSLPMDAYTHGCILHPELTVDSMIPAYATTRIRGQIGNTESELKKLAEENPDLQEAYIAKQKRLKSKLLDHDNVKYLKKILDELEKVLDQVETELQRRNEETPDEGNQPWLCGESFTLADVSLAVTLHRLKFLGFARRNWGHGKRPNLESYYERVLKRKTFNKVLGHVNNILISAVLPTAFRVAKKRAPKVLGSTLVVGLLVGMGYFAFMLFRRRLGNMILSLRPRPNYF
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0009987 (cellular process), GO:0050896 (response to stimulus), GO:0009605 (response to external stimulus), GO:0051716 (cellular response to stimulus), GO:0042221 (response to chemical), GO:0007154 (cell communication), GO:0009991 (response to extracellular stimulus), GO:1901700 (response to oxygen-containing compound), GO:0031668 (cellular response to extracellular stimulus), GO:0007584 (response to nutrient), GO:0071496 (cellular response to external stimulus), GO:0010033 (response to organic substance), GO:0070887 (cellular response to chemical stimulus), GO:0031670 (cellular response to nutrient), GO:0014070 (response to organic cyclic compound), GO:0033273 (response to vitamin), GO:0071310 (cellular response to organic substance), GO:1901701 (cellular response to oxygen-containing compound), GO:0033993 (response to lipid), GO:0031667 (response to nutrient levels), GO:0031669 (cellular response to nutrient levels), GO:0033280 (response to vitamin D), GO:0071295 (cellular response to vitamin), GO:0071305 (cellular response to vitamin D), GO:0071407 (cellular response to organic cyclic compound), GO:0071396 (cellular response to lipid)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0043229 (intracellular organelle), GO:0005739 (mitochondrion), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle)
Protein: Similar to asporin (F7F5B0)
Organism: Rattus norvegicus (Rat)
Subcellular location: Secreted, extracellular space, extracellular matrix
InterPro domains:
- IPR000372: Leucine-rich repeat N-terminal domain (domain) [69-101]
- IPR003591: Leucine-rich repeat, typical subtype (repeat) [100-329]
- IPR032675: Leucine-rich repeat domain superfamily (homologous_superfamily) [69-375]
- IPR050333: Small Leucine-Rich Proteoglycans (family) [48-371]
- IPR016352: Small leucine-rich proteoglycan, class I, decorin/asporin/byglycan (family) [1-373]
- IPR001611: Leucine-rich repeat (repeat) [101-296]
Sequence:
MKEYMMLLLLAVCSAKPFFSPSHTALKTMMLKDMEDTDDEDNDDDDDDNSLFPTKEPVNPFFPFDLFPTCPFGCQCYSRVVHCSDLGLTSVPSNIPFDTRMVDLQNNKIKEIKENDFKGLTSLYALILNNNKLTKIHPKTFLTTKKLRRLYLSHNQLSEIPLNLPRSLAELRIHDNKVKKIQKDTFKGMNALHVLEMSANPLDNNGIEPGAFEGVTVFHIRIAEAKLTSIPKGLPPTLLELHLDFNKISTVELEDFKRYKELQRLGLGNNKITDIENGTFANIPRVREIHLEHNKLKKIPSGLQELKYLQIIFLHNNSITKVGVNDFCPTVPKMKKSLYSAISLFNNPMKYWEIQPATFRCVVGRMSVQLGNVGK
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0044877 (protein-containing complex binding), GO:0005515 (protein binding), GO:0005518 (collagen binding)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0042221 (response to chemical), GO:0010035 (response to inorganic substance), GO:1902074 (response to salt), GO:1901700 (response to oxygen-containing compound)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0042995 (cell projection)
Protein: Procollagen, type XVIII, alpha 1, isoform CRA_b (A6JKA0)
Organism: Rattus norvegicus (Rat)
InterPro domains:
- IPR010515: Collagenase NC10/endostatin (domain) [27-161]
- IPR016187: C-type lectin fold (homologous_superfamily) [27-160]
- IPR016186: C-type lectin-like/link domain superfamily (homologous_superfamily) [19-166]
Sequence:
MLLKMWGSCSSSETPYPRRSPKSKTLIFRAFLSSRLQDLYSIVRRADRSSVPIVNLKDEVLSPSWDTLFSGSQGQLHSGARIFSFDGRDVLRHPAWPQKSVWHGSDPSGRRLMESYCETWRTEATGVTGQASSLLSGRLLEQKAESCHNSYIVLCIENSFMTSFSK
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0043167 (ion binding), GO:0043169 (cation binding), GO:0046872 (metal ion binding), GO:0005509 (calcium ion binding)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0009628 (response to abiotic stimulus), GO:0006950 (response to stress), GO:0042221 (response to chemical), GO:0001101 (response to acid chemical), GO:1901700 (response to oxygen-containing compound), GO:0010035 (response to inorganic substance), GO:0009415 (response to water), GO:0010033 (response to organic substance), GO:0009410 (response to xenobiotic stimulus), GO:1902074 (response to salt)
Cellular Component (CC): GO:0005575 (cellular component), GO:0032991 (protein-containing complex), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0005576 (extracellular region), GO:0005581 (collagen trimer), GO:0030312 (external encapsulating structure), GO:0005615 (extracellular space), GO:0098651 (basement membrane collagen trimer), GO:0031012 (extracellular matrix), GO:0062023 (collagen-containing extracellular matrix), GO:0005604 (basement membrane)