Protein: RNA binding protein fox-1 homolog (A0A8M9Q1D6)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Function: RNA-binding protein that regulates alternative splicing events
Subcellular location: Nucleus
InterPro domains:
- IPR047131: RNA binding protein fox-1 homolog 1-like (family) [20-345]
- IPR012677: Nucleotide-binding alpha-beta plait domain superfamily (homologous_superfamily) [123-224]
- IPR034237: FOX1, RNA recognition motif (domain) [133-208]
- IPR017325: RNA binding protein fox-1 homolog 1-3 (family) [30-345]
- IPR000504: RNA recognition motif domain (domain) [133-209]
- IPR025670: Fox-1 C-terminal domain (domain) [242-330]
- IPR035979: RNA-binding domain superfamily (homologous_superfamily) [127-210]
Sequence:
MWKSSMLNSACVLLSGSGMLPAPSAFLYLAEGNQEGSNPADAMAQTYTTQYAHPSQNGIPAEFTALPSQDYTGQSRVPDHGLTLYTPAQTHSDLNNTDSQTTAISTGSNTAPTEDVTQTDVLISESTEKQQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFETSADADRAREKLNGTIVEGRKIEVNNATARVMTNKKVVNPYTNSWKLNPVVGAVYAPELYAVTGFPYPAAGATVAYRGAHLRGRGRAVYNTFRTAPPPPPIPAYGAVVYQDGFYGAEIYGGYAAYRYTQPATATAYSDSYGRVYATTDPYHHSIGPAAAYSVGTM
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0097159 (organic cyclic compound binding), GO:1901363 (heterocyclic compound binding), GO:0003676 (nucleic acid binding), GO:0003723 (RNA binding), GO:0003729 (mRNA binding), GO:0003730 (mRNA 3'-UTR binding)
Biological Process (BP): GO:0008150 (biological process), GO:0065007 (biological regulation), GO:0050789 (regulation of biological process), GO:0032502 (developmental process), GO:0032501 (multicellular organismal process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0019222 (regulation of metabolic process), GO:0050794 (regulation of cellular process), GO:0003008 (system process), GO:0021854 (hypothalamus development), GO:0021536 (diencephalon development), GO:0060322 (head development), GO:0030900 (forebrain development), GO:0048731 (system development), GO:0048513 (animal organ development), GO:0051171 (regulation of nitrogen compound metabolic process), GO:0060255 (regulation of macromolecule metabolic process), GO:0031323 (regulation of cellular metabolic process), GO:0080090 (regulation of primary metabolic process), GO:0003013 (circulatory system process), GO:0007420 (brain development), GO:0007399 (nervous system development), GO:0021761 (limbic system development), GO:0008015 (blood circulation), GO:0003015 (heart process), GO:0019219 (regulation of nucleobase-containing compound metabolic process), GO:0007417 (central nervous system development), GO:0051252 (regulation of RNA metabolic process), GO:0010468 (regulation of gene expression), GO:0060047 (heart contraction), GO:0043484 (regulation of RNA splicing), GO:1903311 (regulation of mRNA metabolic process), GO:0050684 (regulation of mRNA processing), GO:0048024 (regulation of mRNA splicing, via spliceosome), GO:0000381 (regulation of alternative mRNA splicing, via spliceosome)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)