lokahq/bioreason-rl huggingface dataset:
Protein: ubiquitinyl hydrolase 1 (A0A8M2BGE7)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR018200: Ubiquitin specific protease, conserved site (conserved_site) [169-610]
- IPR001394: Peptidase C19, ubiquitin carboxyl-terminal hydrolase (domain) [168-656]
- IPR028889: Ubiquitin specific protease UPS, catalytic domain (domain) [168-659]
- IPR009060: UBA-like superfamily (homologous_superfamily) [4-72]
- IPR003903: Ubiquitin interacting motif (conserved_site) [30-142]
- IPR054109: UBA-like domain (domain) [15-59]
- IPR054108: Ubiquitin carboxyl-terminal hydrolase 25/28, UIM (conserved_site) [81-131]
- IPR038765: Papain-like cysteine peptidase superfamily (homologous_superfamily) [163-656]
- IPR050164: Ubiquitin carboxyl-terminal hydrolases (family) [111-659]
Sequence:
MTVEQNVLQQHSQKHQQTLLNQLREVTGTTDVQLLQQALQVSNGDLVEAVAFLTEKNAKVPQQDEATYYQTAQITNDRYISVGSQADTNVIDLTGDDKDDLQRAIALSLEESNRAFRETGITDEEQAISRVLEASIAENKASLKRTHTEVWSDSPNPHERKRMENCPVGLKNVGNTCWFSAVIQSLFNLLEFQRLVLHYSPPARMQDLPRNQKEHRNLPFMQELRHLFSLLVGSKRKYVDPSGAVEILKDAFKSSESQQQDVSEFTHKLLDWLEDAFQIKAEEDREGEKPKNPMVELFYGRFLAVGVLEGKKFENTEMFGQYPLQVNGFKDLHECLEAAMIEGEIESLHSAENSAKSGQEHWFTELPPVLTFELSRFEFNQALGRPEKIHNKLEFPSMLYMDRYMDRNREITRIKREEIRRLKEHLTVLQQRLERYLSYGSGPKRFPLADVLQYAMEFASSKPVCTSPVEDIDTTAPPGGTIAQLPPPASAGEQPDACVSAEGSGSGLQASQQQQQRVSIHKPFTQSRVPPDLPMHPAPRHITEEELRVLESCLHRWRSEVENDTRDLQASISRIHRTIELMYSDKSMMQVPYRLHAVLVHEGQANAGHYWAYIYDRHHQRWMKYNDIAVTKSSWEELVRDSFGGYRNASAYCLMYIDDKKPFLIQEEFDKETGQMLSGLDKLPPDLKVFVEADNKLFEREMEEWDALQARKLQQEKLALAAAAAAAAAASVAVQPMSTEPCSPDNTAAPQHDPEYMEQQSPSGDSKHLQEDTERAISKAAAEHDEKSPEALLNTSQSSHPDSKLTSDPCPPPDPEQDDPTCPPPGPQRVVEVAIPNVGTFVIQSKEGGYDDEAMMTPNMQGIIMAIGKSRSVYDKCGPEAAFFKAMKVEYTRLLRLAQEDTPPERDYRLQHVIVFFIHNEAPKKIVERTLLMQFADRNLGFDERCKSIMKVARAKLELIKPDEVNLEEYEMWHQDYRIFRETSVFLLIGLELFMKKSFVEALMYLIYAYQYNKELLAKGPYRGHDEELIAHYRRECLLKLNEYAAALFETGEEAKVNTGLSIMNDLVVPCLPLLLVDEMEEKDMVAVEDMRNRWCSYLGQEMEPNLQEKLTDFLPKLLDCSTEIKSFHEPPKLPSYSTLELFERFGRVMTSLTMGRTPADGR
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0032501 (multicellular organismal process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0007389 (pattern specification process), GO:1904888 (cranial skeletal system development), GO:0003002 (regionalization), GO:0009953 (dorsal/ventral pattern formation)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Protein-arginine deiminase (A0A8M2BJY4)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Function: Catalyzes the deimination of arginine residues of proteins
Subcellular location: Cytoplasm
InterPro domains:
- IPR008972: Cupredoxin (homologous_superfamily) [5-109]
- IPR036556: Protein-arginine deiminase, central domain superfamily (homologous_superfamily) [110-301]
- IPR013733: Protein-arginine deiminase (PAD), central domain (domain) [110-281]
- IPR038685: PAD, N-terminal domain superfamily (homologous_superfamily) [3-115]
- IPR004303: Protein-arginine deiminase (family) [1-674]
- IPR013530: Protein-arginine deiminase, C-terminal (domain) [292-672]
- IPR013732: Protein-arginine deiminase (PAD), N-terminal (domain) [1-108]
Sequence:
MVSRRSLTIDTEKATKTTYVLGTTLTVNLIRCAPPQSKSFSIRCTPNVHYKITPPITDKNALPYPLGPNTILLITMDTVSETAFDSKLSVRYYGEKTETLGDAILHLTAVEISLDVDADRDGVVEKNNPNKASWKWGPNGHGAILLVNCDSESIYDKKPDNENSDIGKVSDLKDMSKMVLRTNGPSQLPEGYKLSMHISQSTSESVRVFRPRTNTKTENLWKYQLLKLFLKDFLMVVGTDTLTQEVPYLGGSSELEFHVEGLRFPDKDFDGLVTINLSLLEPCGKGFPETPIFTDKVVFRVSPWIMTPNTLKPVEVYVCSTEDNYSFLKSIRNLVEKSGYKLKICHEYMNRGDRWMQDELEFGYIDSPHHRFPVVLDSPRDGDLQDFPYDALLGPDFGYVTRNALNEEVSSLDSFGNLEVSPPVTVNGKNYPLGRIIIGVAFPTARKGRNMTKVVQDFLWAQKVQEPIALYSDWLFVGHVDEFMSFVPAPDRKKFRLLLASPDAGYKVFKSLQNSGLGKAEMFPGKEEAISVNDLLSDKKLQAENRYVQNCIDWNRDVLKKELGLDDEDIIDLPILFKVMEEKNEDSVPRAVAYYPDMVNMIVLGDQLGIPKPFGPQVKGVCALEKEMCSLLEPLGLKCTFIDDFAPYHKLLGEVHCGSNVLREPFTVRWWNLEL
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0016787 (hydrolase activity), GO:0016810 (hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds), GO:0016813 (hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0032501 (multicellular organismal process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0048731 (system development), GO:0001944 (vasculature development), GO:0072359 (circulatory system development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0099080 (supramolecular complex), GO:0035770 (ribonucleoprotein granule), GO:0036464 (cytoplasmic ribonucleoprotein granule), GO:0043229 (intracellular organelle), GO:0043228 (non-membrane-bounded organelle), GO:0000932 (P-body), GO:0043232 (intracellular non-membrane-bounded organelle)
Protein: Solute carrier family 22 member 5 isoform X2 (A0A8M2BHP0)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Membrane; Multi- pass membrane protein
InterPro domains:
Sequence:
MRDYDDITSFLGTWGQFQLTVFLALAISILPNGFVGLYIVFVGDTPAHECLIPEQINISSVWRDAAIPTQMQDGVLKRSSCSRYRLDTLRQLSMLNYTPNVEVNLSQIETEPCVDGWSYSQEFYQSTIVTEWDLVCEREYKGPLTSSIYFCGVLVGTFLSGQMSDRYGRRPVLFAMMALQTITILIQMFSPSWEVFSAIYFFVGFSGFSNYVVAYVLGSEILSPASRVLFGSLGVFMGSGIGQMFFPLAAYFIRSWRWLVLTNALTGLLYFPLWWFIPESPRWLLSQGRTAEAEAVLRRAAEKNRVTAPEVIFSSSEVRGHLQLLRD
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005215 (transporter activity), GO:0022857 (transmembrane transporter activity), GO:0015101 (organic cation transmembrane transporter activity), GO:0072349 (modified amino acid transmembrane transporter activity), GO:0015651 (quaternary ammonium group transmembrane transporter activity), GO:0015226 (carnitine transmembrane transporter activity)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0051179 (localization), GO:0098754 (detoxification), GO:0050896 (response to stimulus), GO:0051234 (establishment of localization), GO:0044237 (cellular metabolic process), GO:0042221 (response to chemical), GO:0061687 (detoxification of inorganic compound), GO:0010035 (response to inorganic substance), GO:0010033 (response to organic substance), GO:0006810 (transport), GO:0009636 (response to toxic substance), GO:0010038 (response to metal ion), GO:0015698 (inorganic anion transport), GO:0051597 (response to methylmercury), GO:0046689 (response to mercury ion)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0009536 (plastid), GO:0043231 (intracellular membrane-bounded organelle)
Protein: POU domain protein (A0A8M9PGB2)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Nucleus
InterPro domains:
- IPR013847: POU domain (domain) [522-683]
- IPR010982: Lambda repressor-like, DNA-binding domain superfamily (homologous_superfamily) [506-620]
- IPR000327: POU-specific domain (domain) [503-613]
- IPR001356: Homeodomain (domain) [632-696]
- IPR050255: POU domain transcription factor (family) [275-699]
- IPR009057: Homedomain-like superfamily (homologous_superfamily) [630-695]
Sequence:
MITGQLSKPLLPLRADMDACELRDDDKAASPDSELNEEPLLLSADTDSEEKMYGGRVGSVQSDASSSPTEHGHMGQSHPTYPVGPQSLLVAQQLASAVSGVMSGGAPGLNQPILIPFNAGGHLGGQQGLVLSLPTAANIQGLVAAAAAGGIMALPLQNLQATSSLNSQLQHLQQLQQLQHHQQQQHHHHQQQQQQQQREREREREREREQREREQRERDQQREREQHQQLCGQAHLQPPSHHQLTPPIQSQVSGPSPGPVPTCPPSNHSSAQPPQSPPSHRQNQSPARSLPSPVTPPLPLQGNAFHLLRQRESEGERKRECLPSDRLNPLASQAAVAAAAAMGSIAGSQVFGNALSSLQGVTGQLVTNAQGQIIGTIPLMPNSVGPSNQSGGGTSPLQVQPITPQLLTNAQGQIIATVIGNQILPVINTQGITLSPIKPGQQLPQTGQTPQAPPVSQPNLLRMPHSQSPLRQASSSSSTSSSSSSALSVGQLVSNPQTAPSEVDGVNLEEIREFAKAFKIRRLSLGLTQTQVGQALSATEGPAYSQSAICRHTILRSHFFLPQEAQENTIASSLTGKLNPGLLYPARFEKLDITPKSAQKIKPVLERWMAEAEARHRSGMQNLTEFIGSEPSKKRKRRTSFTPQALEILNSHFEKNTHPSGQEMTEIAEKLNYDREVVRVWFCNKRQALKNTIKRLKQPEGLVPGAPMDPLVDNMEEHQ
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0097159 (organic cyclic compound binding), GO:1901363 (heterocyclic compound binding), GO:0005515 (protein binding), GO:0003676 (nucleic acid binding), GO:0003677 (DNA binding), GO:0043565 (sequence-specific DNA binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0048856 (anatomical structure development), GO:0031099 (regeneration)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Nucleoporin p54 isoform X2 (A0A8M9PI41)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR040985: Nup54, C-terminal interacting domain (domain) [536-574]
- IPR024864: Nucleoporin Nup54/Nup57/Nup44 (family) [84-581]
- IPR025712: Nucleoporin Nup54, alpha-helical domain (domain) [383-521]
Sequence:
MAFNFGGASGSASAPGFSFKSSSSTPFGFGASTTTTASSATGFGLTGTGFGAPTTTSASTGFGFGTGGTGFGPLVCSAGPGPAPSAAAVSFGGFGLGPAAPVFSFGSGLGGAGAFGGFGSTTTSAGTGSSFSFSTPANTGSSLFNTQSKGFGFSSAPAPASGFTGALGGGALGFGGFGALQNTQQGGVFGQQAPPPCSQLFNTASALSAPAVLSDERDSILARWNQLQAFWGIGRGYYCSTTPPVEFSQENPFCRFKAVGYSCVPDVRDEDGLLALALGKREADVRLQQQQLVESLHKLLGGAHTLSVNVEGVRALPDDQTEVIIYVVERSPNGSSKRVPASTLYNFLEQVNIKTQLQQLSVIMTVSRTALSPAQLKQLLQNPPAGVDPIIWEQAKVDNPDPEKLIPVPMVGFRELLRRLKIQEQMTKQHQTRVDIISTDISELQRNQATTAAKITQYKRKLMDLSHRVLQVLIRQEVQRKSGYAVQLDEEHLRVQLETIQSELNAPTQFKGRLNELMSQIRMQNHFGAVRAEERYRVDADLLREIRQHLKHQQEGLSHLISVIKDDLDDIKTIEDGLHDSVHTRSSKLS
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0032501 (multicellular organismal process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0007389 (pattern specification process), GO:0035295 (tube development), GO:0048513 (animal organ development), GO:0003002 (regionalization), GO:0048731 (system development), GO:0048732 (gland development), GO:0009953 (dorsal/ventral pattern formation), GO:0035272 (exocrine system development), GO:0055123 (digestive system development), GO:0048565 (digestive tract development), GO:0061008 (hepaticobiliary system development), GO:0072359 (circulatory system development), GO:0031016 (pancreas development), GO:0007507 (heart development), GO:0031017 (exocrine pancreas development), GO:0001889 (liver development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0032991 (protein-containing complex), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0140513 (nuclear protein-containing complex), GO:0031975 (envelope), GO:0012505 (endomembrane system), GO:0005643 (nuclear pore), GO:0043229 (intracellular organelle), GO:0031967 (organelle envelope), GO:0005635 (nuclear envelope), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Neuromedin-U isoform X2 (A0A8M9P2H9)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR042384: Neuromedin-U (family) [56-158]
- IPR008200: Neuromedin U, C-terminal (domain) [126-150]
Sequence:
MRNSNQCERATAHSAMSPGNTSALMLAVLLLSFIPITTSAPMLLNPSSLEHEQLLTQTSDVLEDLCFLMLGSLQKSKEITARETSKRFLFHYTKPNGAGLSDGTSTVLHPLLELIPQLARRRSRRMKLNENLQGPGRIQSRGYFLYRPRNGRRSDEYV
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding), GO:0005102 (signaling receptor binding), GO:0001664 (G protein-coupled receptor binding), GO:0071855 (neuropeptide receptor binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032501 (multicellular organismal process), GO:0048511 (rhythmic process), GO:0007610 (behavior), GO:0007623 (circadian rhythm), GO:0007622 (rhythmic behavior), GO:0048512 (circadian behavior)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0042995 (cell projection), GO:0120025 (plasma membrane bounded cell projection), GO:0043005 (neuron projection), GO:0030424 (axon)
Protein: Carboxypeptidase B isoform 2 (A0A8M1NG52)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR057246: Zinc carboxypeptidases, zinc-binding region 1 (binding_site) [15-37]
- IPR057247: Zinc carboxypeptidases, zinc-binding region 2 (binding_site) [152-162]
- IPR000834: Peptidase M14, carboxypeptidase A (domain) [1-260]
Sequence:
MHLLKIGKNTGSNKPAVFMDCGFHAREWITHAFCQWFVNEAVSTYGSDPDMTNLLDRMDFFVLPVFNIDGYEYTWNRDRMWRKTRSKNSGSSCIGTDPNRNFNAGWCTVGASSNPCSDTYCGSSPESEIESKNLANFIRTNKSVIKAYLTVHSYSQLLLFPYSYKYDLAAHHSELMSVSQGAIAALRSLYGTKYTSGPGAATIYPAAGGSDDWAYDLGVKYSYTFELRDEGRYGFLLPESQIKPTCEETMLAVKYIANHVLNNLY
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0140096 (catalytic activity, acting on a protein), GO:0016787 (hydrolase activity), GO:0008233 (peptidase activity), GO:0008237 (metallopeptidase activity), GO:0008238 (exopeptidase activity), GO:0004180 (carboxypeptidase activity), GO:0008235 (metalloexopeptidase activity), GO:0004181 (metallocarboxypeptidase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0009987 (cellular process), GO:0051716 (cellular response to stimulus), GO:0042221 (response to chemical), GO:0009410 (response to xenobiotic stimulus), GO:0070887 (cellular response to chemical stimulus), GO:0071466 (cellular response to xenobiotic stimulus)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005737 (cytoplasm), GO:0005622 (intracellular anatomical structure)
Protein: dual-specificity kinase (A0A8M2B533)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR044131: Dual specificity tyrosine-phosphorylation-regulated kinase 1A/1B, catalytic domain (domain) [175-518]
- IPR008271: Serine/threonine-protein kinase, active site (active_site) [310-322]
- IPR000719: Protein kinase domain (domain) [186-513]
- IPR050494: Serine/threonine and dual-specificity kinase (family) [96-514]
- IPR017441: Protein kinase, ATP binding site (binding_site) [192-215]
- IPR011009: Protein kinase-like domain superfamily (homologous_superfamily) [174-526]
Sequence:
MVITSSVEEKPQPSNRMVANLPTESWIGSPDQNRFLPQSHLLRKPARSGSSSGCKPPSSTLCQPAALGFSPAEPTMSSQHSHPSFSNIHSMADQQQVLSDMTILQRRIPPSFRDPASAPLRKLSVDLIKTYKHINEVYYTKKKRRAQQVPPEDSSTKKERKVYNDGYDDDNYDYIVKNGEKWLDRYEIDSLIGKGSFGQVVKAYDHHEQEWVAIKIIKNKKAFLNQAQIELRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFELLSYNLYDLLRNTNFRGVSLNLTRKFAQQLCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGSNEVDQMNKIVEVLGVPPNHMLDQAPKARKYFDKLSDGLWTVKKNKDIKKVLYPSASEYKPPATRRLHEILGVETGGPGGRRAGEQGHAPCDYLKFKDLILRMLDYDPKTRITPFYALQHNFFKKTTDEGTNTSSSTSTSPAMDHSHSTSTTSSVSSSGGSSGSSNDNRNYRYSNRYYNSAVTHTDYEMQSPQAPSQQQLRIWPGGDSSMGQLSNSGSDSSYPQLLLHKPAATQHSRHFLGNIGGMMEPHHPHPIYGSHHSNGRQLRQQQQQQNQPQGQASQGQQGTALMPVSSPQMQDSIELSLTHHHHLGQSSIMQPPPSSLDSSQYGSSNLHLGLSAFRTRTVMAPQQPPSASQQQLPQAPASQDSMVAASGLGYIPPCYAGSNNNNNPPQGSVGVGAMLTGGPPPRGVGGAGGRPDSEESSMMAVCGSGSGSGQSAANS
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0003824 (catalytic activity), GO:0016740 (transferase activity), GO:0140096 (catalytic activity, acting on a protein), GO:0005515 (protein binding), GO:0004672 (protein kinase activity), GO:0016772 (transferase activity, transferring phosphorus-containing groups), GO:0016773 (phosphotransferase activity, alcohol group as acceptor), GO:0016301 (kinase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0032501 (multicellular organismal process), GO:0048646 (anatomical structure formation involved in morphogenesis), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0009653 (anatomical structure morphogenesis), GO:0009888 (tissue development), GO:0009790 (embryo development), GO:0001704 (formation of primary germ layer), GO:0048598 (embryonic morphogenesis), GO:0007369 (gastrulation), GO:0007492 (endoderm development), GO:0001706 (endoderm formation)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0030054 (cell junction), GO:0045202 (synapse)
Protein: Actin filament-associated protein 1-like 2 isoform X3 (A0A8M9PAX9)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR030113: Actin-filament associated protein (family) [1-888]
- IPR001849: Pleckstrin homology domain (domain) [206-472]
- IPR011993: PH-like domain superfamily (homologous_superfamily) [183-474]
Sequence:
MDKHKVLEQLLEQLQKFLKILDVEKLSGNAKVQKGLLMELLQSYKSSNAGGDEEYIYMNKVIVTCQTQDKTNRDHRPEANGDPSKHISVKNPPEPPPPRPCNTGREPFPLPPAPAPASMENESYYEDPQPYDPISINDFGCFAVITGLRKRVEASNGVVYAVITREDTEQLSSSYESYDEEEVTKGKSTAQHQWPSPEASIELMKDARICAFLWRKKWLGQWAKQLCVVREHRLLCYKSSKDQTPLLDISLLGCSVVYKEKQTKRKEHKLKISPLGAEAIVLGLQSKEQAEQWLKVIQEISPKNTTGSDVTDSPTLICTKGEQSERYSVASESGSSTDSHAENMENKDVKKKYGKFSNLMNIGKKKVCSLESPEKSVDTSGYLNVLVNTQWRSRWCSVKDRQLWIYSDKSKGKVAQQPLSLEGCMVLPDPSPEHLYSFRIQMDGEELAILEAKSSADMGHWLGLILSQTGTKTDPEDLSYDYVNSERISSIVNAAKTSMYLMQRRYSEPNTYTDSPPSDPQTCDDIYDDVPSTENEQEEVQEVQNGSEEGTVNAEEENGKDRVYLDLIPLRSFLHTSSGRVSPQTSSTTQTEISPSTTPHVDDQLKEPVYESSLPTSTENEVPPPVAPRVDTDPSPVPNLHVQPQKISFLGQEIQKKASSTSPLPKTQSLPQTSAQTPQSPPTSRARAASTDRLLDRLKFSPAGPGSVEVKLGKNRTEADVRRYTDDRDRLEREREEVKNTLATLRKDRREVKDELSSCQDPIRQASLEARLKQMEETCREAERRRVEVELSLMEVKENLRKVESGPFTLGTTVDSSLLEISVHKPAAVSSPAPNTPNNTNINTPACTNNGDSPVNSATALKNRPPSVMAASKGNVLQKAKEWEKKTTT
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding), GO:0019904 (protein domain specific binding), GO:0017124 (SH3 domain binding), GO:0042169 (SH2 domain binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0032501 (multicellular organismal process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0009653 (anatomical structure morphogenesis), GO:0048646 (anatomical structure formation involved in morphogenesis), GO:0060900 (embryonic camera-type eye formation), GO:0009887 (animal organ morphogenesis), GO:0048729 (tissue morphogenesis), GO:0048598 (embryonic morphogenesis), GO:0009888 (tissue development), GO:0048731 (system development), GO:0048513 (animal organ development), GO:0009790 (embryo development), GO:0048568 (embryonic organ development), GO:0048562 (embryonic organ morphogenesis), GO:0048880 (sensory system development), GO:0007423 (sensory organ development), GO:0090596 (sensory organ morphogenesis), GO:0002072 (optic cup morphogenesis involved in camera-type eye development), GO:0002009 (morphogenesis of an epithelium), GO:0060429 (epithelium development), GO:0016331 (morphogenesis of embryonic epithelium), GO:0002011 (morphogenesis of an epithelial sheet), GO:0048592 (eye morphogenesis), GO:0001654 (eye development), GO:0048048 (embryonic eye morphogenesis), GO:0031076 (embryonic camera-type eye development), GO:0061386 (closure of optic fissure), GO:0150063 (visual system development), GO:0043010 (camera-type eye development), GO:0048593 (camera-type eye morphogenesis), GO:0048596 (embryonic camera-type eye morphogenesis)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005737 (cytoplasm), GO:0005622 (intracellular anatomical structure)
Protein: Nucleoporin p54 isoform X1 (A0A8M9PCH0)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR040985: Nup54, C-terminal interacting domain (domain) [537-575]
- IPR024864: Nucleoporin Nup54/Nup57/Nup44 (family) [84-582]
- IPR025712: Nucleoporin Nup54, alpha-helical domain (domain) [384-522]
Sequence:
MAFNFGGASGSASAPGFSFKSSSSTPFGFGASTTTTASSATGFGLTGTGFGAPTTTSASTGFGFGTGGTGFGPLVCSAGPGPAPSAAAVSFGGFGLGPAAPVFSFGSGLGGAAGAFGGFGSTTTSAGTGSSFSFSTPANTGSSLFNTQSKGFGFSSAPAPASGFTGALGGGALGFGGFGALQNTQQGGVFGQQAPPPCSQLFNTASALSAPAVLSDERDSILARWNQLQAFWGIGRGYYCSTTPPVEFSQENPFCRFKAVGYSCVPDVRDEDGLLALALGKREADVRLQQQQLVESLHKLLGGAHTLSVNVEGVRALPDDQTEVIIYVVERSPNGSSKRVPASTLYNFLEQVNIKTQLQQLSVIMTVSRTALSPAQLKQLLQNPPAGVDPIIWEQAKVDNPDPEKLIPVPMVGFRELLRRLKIQEQMTKQHQTRVDIISTDISELQRNQATTAAKITQYKRKLMDLSHRVLQVLIRQEVQRKSGYAVQLDEEHLRVQLETIQSELNAPTQFKGRLNELMSQIRMQNHFGAVRAEERYRVDADLLREIRQHLKHQQEGLSHLISVIKDDLDDIKTIEDGLHDSVHTRSSKLS
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0032501 (multicellular organismal process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0007389 (pattern specification process), GO:0035295 (tube development), GO:0048513 (animal organ development), GO:0003002 (regionalization), GO:0048731 (system development), GO:0048732 (gland development), GO:0009953 (dorsal/ventral pattern formation), GO:0035272 (exocrine system development), GO:0055123 (digestive system development), GO:0048565 (digestive tract development), GO:0061008 (hepaticobiliary system development), GO:0072359 (circulatory system development), GO:0031016 (pancreas development), GO:0007507 (heart development), GO:0031017 (exocrine pancreas development), GO:0001889 (liver development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0032991 (protein-containing complex), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0140513 (nuclear protein-containing complex), GO:0031975 (envelope), GO:0012505 (endomembrane system), GO:0005643 (nuclear pore), GO:0043229 (intracellular organelle), GO:0031967 (organelle envelope), GO:0005635 (nuclear envelope), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)