Protein: Procollagen, type XVIII, alpha 1, isoform CRA_c (A6JK99)
Organism: Rattus norvegicus (Rat)
Subcellular location: Secreted
InterPro domains:
- IPR045463: Collagen type XV/XVIII, trimerization domain (domain) [1322-1369]
- IPR016187: C-type lectin fold (homologous_superfamily) [1464-1634]
- IPR010515: Collagenase NC10/endostatin (domain) [1464-1635]
- IPR016186: C-type lectin-like/link domain superfamily (homologous_superfamily) [1459-1640]
- IPR013320: Concanavalin A-like lectin/glucanase domain superfamily (homologous_superfamily) [363-558]
- IPR050149: Collagen superfamily (family) [215-1006]
- IPR048287: Thrombospondin-like, N-terminal domain (domain) [362-550]
- IPR008160: Collagen triple helix repeat (repeat) [693-1123]
- IPR001791: Laminin G domain (domain) [401-546]
- IPR010363: Domain of unknown function DUF959, collagen XVIII, N-terminal (domain) [137-334]
Sequence:
MEFEGTAWWVALILRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPSSEACTALMAPDPSRRFCLLLLLLLLLLLSCCLVPTSADGNSLNPLNPLEWLWFAKTTDSLEARVSQPQISSPVQSPENPTTHVVPQDGLTEQQTTSANPKLSPEEDREAGQGGTPASPVVPIPLVAPAASPDTKEENVAGVGAKILNVAQGIRSFVQLWDEDSTTEHYPGIEASDSPVPTVLPTLAEPSSAPQGSETTLLLSSGIPSSPDSQTTEAGTLAVPTQPTPFQSSLQAPLGRPSVPPPSPENVAEDVGLLQLLGDPLPQKISQVEDPHVGLAYVFGPYSKSSQMAQYHFPKLFFRDFSLLFEVRPTTEAAGVLFAITDAAQVVVSLGVKLSEVRDGQQNISLLYTEPGASQTQTGASFRLPAFVGQWTHFALSVDGSSVALYVDCEEFQRVPFARSPHGLELERGAGLFVGQAGAADPDKFQGMISELRVRKTPRVSPVHCLDEEDDDDDRASGDFGSGLEESSNLHRQETYLRPGLPQPPPVTSPPLAGGSATEDSRTEEKEEEATVDSKGADTLPVTDSSGVWDGDVQNPGGGLIKGGLKGQKGEPGAQGPPGPAGPQGPAGPAVQSPSSQPVPGAQGPPGPQGPPGKDGIPGRDGEPGDPGEDGRPGDTGPQGFPGTPGDVGPKGEKGDPGIGPRGPPGPPGPPGPSFRQDKLTFIDMEGSGGFSGDLESLRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSYAPGPAGLPGVPGKEGPPGFPGPPGPPGKEGPPGVAGQKGSVGDAGSPGPKGSKGDLGPIGMPGKSGLPGLPGPVGPPGPPGPPGPPGPGFAAGFDDMEGSGTPLWSTARSSDGLQGDPGVTGPPGAKGEVGADGVQGIPGLPGREGVAGPPGPKGEKGTQGEKGNPGKDGVGRPGLPGPPGPPGPVIYVSNEDRAVVSTPGPEGKPGYAGFPGPAGPKGDLGSKGEQGLPGPKGEKGEPGSIFSPDGTALGQAQKGAKGEPGFRGPPGPYGRPGYKGEIGFPGRPGRPGTNGLKGEKGEPGEASLGFSMRGLPGPPGPPGPPGPPGVPVYDSNAFVESGRPGLPGQQGVQGPPGPKGDKGEVGPPGPPGQFPIDLFHLEAEMKGDKGDRGDAGRKGERGEPGAPGGGFFSSSVPGPPGPPGYPGIPGPKGESIRGPPGPPGPQGPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQTVSVPGPPGPPGPPGPPGAMGASAGQVRIWATYQTMLDKIREVPEGWLIFVAEREELYVRVRNGFRKVLLEARTALPHGTDNEVAALQPPLVQLHEGSSYTRREHSYPTARPWRADDILANPPRLPDRQPYPGVPHHHHHHHHHHSSHEHRPPAHPSPSPAHTHQDFHPVLHLVALNTPLSGGMRGIRGADFQCFQQARAVGLSGTFRAFLSSRLQDLYSIVRRADRSSVPIVNLKDEVLSPSWDTLFSGSQGQLHSGARIFSFDGRDVLRHPAWPQKSVWHGSDPSGRRLMESYCETWRTEATGVTGQASSLLSGRLLEQKAESCHNSYIVLCIENSFMTSFSK
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0009628 (response to abiotic stimulus), GO:0006950 (response to stress), GO:0042221 (response to chemical), GO:0001101 (response to acid chemical), GO:1901700 (response to oxygen-containing compound), GO:0010035 (response to inorganic substance), GO:0009415 (response to water), GO:0010033 (response to organic substance), GO:0009410 (response to xenobiotic stimulus), GO:1902074 (response to salt)
Cellular Component (CC): GO:0005575 (cellular component), GO:0032991 (protein-containing complex), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0005576 (extracellular region), GO:0005581 (collagen trimer), GO:0030312 (external encapsulating structure), GO:0005615 (extracellular space), GO:0098651 (basement membrane collagen trimer), GO:0031012 (extracellular matrix), GO:0062023 (collagen-containing extracellular matrix), GO:0005604 (basement membrane)