lokahq/bioreason-rl huggingface dataset:
Protein: non-specific serine/threonine protein kinase (A0A8M2BDG3)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR000719: Protein kinase domain (domain) [20-270]
- IPR017441: Protein kinase, ATP binding site (binding_site) [26-49]
- IPR050629: STE20/SPS1-related Proline-Alanine-rich Kinase (family) [9-333]
- IPR048288: Programmed cell death protein 10, dimerisation domain (domain) [357-409]
- IPR046409: Programmed cell death protein 10, dimerisation domain superfamily (homologous_superfamily) [348-424]
- IPR011009: Protein kinase-like domain superfamily (homologous_superfamily) [19-302]
Sequence:
MAHLQNIRNQNSRLNPEEYFTKLERIGKGSFGEVYKGINNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLTGSKLWIIMEYLGGGSALDLLRPGTLEEVYIATILREILKGLDYLHSERKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNAELHPMRVLFLIPKNNPPTLEGSYSKAFKDFVEACLNKEPRFRPTAKELLKHKFITRYTKKTSYLSELIDRYRRWKSEGHGEESSSDDSDMDGEGDDRDQGPMWTFPTVRPSTINKLNRGLSHLDNKTSDVMKRQPKSSSLTSFITPIFKELKEKRRVGGNGVCAVEELENAFSLAEESSPGISDRLLNHVMERVCRFTLNGNSLPLKR
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0040007 (growth), GO:0032501 (multicellular organismal process), GO:0048589 (developmental growth), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0009653 (anatomical structure morphogenesis), GO:0060560 (developmental growth involved in morphogenesis), GO:0048731 (system development), GO:0048513 (animal organ development), GO:0003401 (axis elongation), GO:0072359 (circulatory system development), GO:0007507 (heart development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0012505 (endomembrane system), GO:0005794 (Golgi apparatus), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle)
Protein: calcium/calmodulin-dependent protein kinase (A0A8M3AS42)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR008271: Serine/threonine-protein kinase, active site (active_site) [131-143]
- IPR000719: Protein kinase domain (domain) [13-271]
- IPR013543: Calcium/calmodulin-dependent protein kinase II, association-domain (domain) [377-504]
- IPR017441: Protein kinase, ATP binding site (binding_site) [19-42]
- IPR032710: NTF2-like domain superfamily (homologous_superfamily) [371-501]
- IPR011009: Protein kinase-like domain superfamily (homologous_superfamily) [9-290]
Sequence:
MATTTCTRFTDEYQLYEELGKGAFSVVRRCVKLSTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLLFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKNAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITAQEALKHPWVCQRSTVASMMHRQETVECLKKFNARRKLKGAILTTMLVSRNFSVGSRQTTAPASVTAAAAAVAAAAGTTAGLVEQAAKTLLNKKADVKESSDSSNATVEDEEMKARKQEIIKITEQLIEAINNGDFEAYAKICDPGLTCFEPEALGNLVEGMDFHRFYFENLLSKNSKPIHTTILNPHVHLIGEEAACIAYIRLTQYVDGQGRPRSSQSEETRVWHRRDSKWQNVHFHCSGAPAAPLQ
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0016740 (transferase activity), GO:0016772 (transferase activity, transferring phosphorus-containing groups), GO:0016301 (kinase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0006950 (response to stress), GO:0009628 (response to abiotic stimulus), GO:0070482 (response to oxygen levels), GO:0001666 (response to hypoxia), GO:0036293 (response to decreased oxygen levels)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005829 (cytosol), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X2 (A0A8M9Q7X8)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR038043: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 3, SWIB domain (domain) [292-365]
- IPR036885: SWIB/MDM2 domain superfamily (homologous_superfamily) [280-370]
- IPR019835: SWIB domain (domain) [286-365]
- IPR003121: SWIB/MDM2 domain (domain) [285-362]
Sequence:
MERKRPGMPSGARMPHQGAPMGPPGPPYGGSPAVRPGLTNQSMEASRKRPNPSQQQIQQQAVQNRNRKKPVGFPGPNEMPGRQMDLRETQSDPTLGSKFSDECWGKTSILRKKWSTQTERNSNSAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNAAKPDAEDSEGSIASWELRVEGKLLDDPGKMKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTGTTQETDGFQVKRPGDVNVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQTRSSIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIPQRLTNLLLPPDPIVINHIISVDPNDQKKTACYDIDVEVEDPLKAQMSSFLLSTANQQEIASLDNKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVAGNPEEERRAEFYHQPWSQEAVSRYFYCKIQQRRQELEQALALRNT
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0009987 (cellular process), GO:0032501 (multicellular organismal process), GO:0048869 (cellular developmental process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0009653 (anatomical structure morphogenesis), GO:0007389 (pattern specification process), GO:0009799 (specification of symmetry), GO:0061061 (muscle structure development), GO:0009887 (animal organ morphogenesis), GO:0009888 (tissue development), GO:0003002 (regionalization), GO:0030154 (cell differentiation), GO:0048731 (system development), GO:0048513 (animal organ development), GO:0007507 (heart development), GO:0009855 (determination of bilateral symmetry), GO:0003007 (heart morphogenesis), GO:0042692 (muscle cell differentiation), GO:0060972 (left/right pattern formation), GO:0035051 (cardiocyte differentiation), GO:0072359 (circulatory system development), GO:0060537 (muscle tissue development), GO:0007368 (determination of left/right symmetry), GO:0055007 (cardiac muscle cell differentiation), GO:0051146 (striated muscle cell differentiation), GO:0014706 (striated muscle tissue development), GO:0048738 (cardiac muscle tissue development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Prominin-1 isoform X2 (A0A8M9QPL4)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Cell projection, microvillus membrane; Multi-pass membrane protein. Membrane; Multi-pass membrane protein
InterPro domains:
Sequence:
MDMWWKVGLVLVMFWGLTSSEDREEHRESPPRTAMLRAPVETLDFGFVPSVVYETHAYYEPGPMGILFHMVHAFLYVVQPNPFPKDLIVKMVQQNMGGIKGDDYKKPENVVLLLQTIYYELGFIVLSVLGVFFVLLMPIVGLCFCVCRCCENCGGEMHQRQKKNGDCLRGFYMATLIATSVFLAVGVTVAYVANQNITSQIKSTRRLVSTNIRDLKAFANYTPAQIDYLTAQYTTAKNKVLSDLDNIGTLLGGQIHNKLESEVVPALDHALRMTAVKVESAIKAMRETKESLESVSTSLETLQEGTGRLQVSLQSERVSLSNTLNDWACSNEDVTHTCNSIRGTLNQLALSANFNGLPDVEAPLANLDAVLKTDLSNIVQKGYSSFNDTPQLVREQTKGIVSEVKGLLDKSGAEIIGFTKMFPVEPALQNFSKFLTDSQKNIEAYYPQIDQLDFYRWIGCVLICCLVVLVLAFNFLGLLCGSCGYDKNSTPTTRGCLSNTGGNLLMASVGFSFIFSWVLMGVVVTTFIVGGNIEKLVCEPLANRQIFKIIDTPYMVHPTKKNFLPGMLFQDPNIDLTIGSMYRDCYENNGLYSALQLETKFNFNKFLNATVFNPEIGDIFNNVNVDLQGMLLLEQEGKDNLIDFANTGIGDIDYQAYLTEVNKGVTVVDLLSYANELDAQADNLPRGALENALKGHASSIRQIHKDQVVPMEQAMKFVKARSNLNQSIRQLEKTSRELPVKVTNVLNAIEAAEYLISNNASHVVKQESDKFIKKIIGYFSQYTEWVKHSLAMEVAQCKPISNIVDSAEIVACSFIVDSVNTFWFGLGGCCVLLIPSIIMSVKLAKFYRRMDTEDVFDDYPSYDTMRWYPRASAPPRQPDW
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0009987 (cellular process), GO:0071840 (cellular component organization or biogenesis), GO:0016043 (cellular component organization), GO:0044085 (cellular component biogenesis), GO:0030030 (cell projection organization), GO:0022607 (cellular component assembly), GO:0030031 (cell projection assembly), GO:0043711 (pilus organization), GO:0009297 (pilus assembly)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0045177 (apical part of cell), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0098590 (plasma membrane region), GO:0005886 (plasma membrane), GO:0016324 (apical plasma membrane)
Protein: Paired box protein Pax-4 isoform X1 (A0A8M9PHB0)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Nucleus
InterPro domains:
Sequence:
MRKPPSNEISVYFSGEGSVNQLGGVFLNGRPLPVYKRRLMIELATEGMRPCEISRILKVSNGCVSKILGRFQRTGAIGPKAVGGSRPRLLTPEVISIIVQHKRQNPTLFAWEIRQKLATERACRGDQVPSVSSINRILKKIHQDEDIAYPNEKHYHTEQLNVQSHFQQQMNTNLPRTAHRSRTAFTADQSGRLEKEFTCGLYPDLLTREKLAEETNLSQDTIKAIKI
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0097159 (organic cyclic compound binding), GO:1901363 (heterocyclic compound binding), GO:0003676 (nucleic acid binding), GO:0003677 (DNA binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0032501 (multicellular organismal process), GO:0042592 (homeostatic process), GO:0048878 (chemical homeostasis), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0009791 (post-embryonic development), GO:0033500 (carbohydrate homeostasis), GO:0031018 (endocrine pancreas development), GO:0031099 (regeneration), GO:0031100 (animal organ regeneration), GO:0035270 (endocrine system development), GO:0031016 (pancreas development), GO:0042593 (glucose homeostasis), GO:1990798 (pancreas regeneration)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Zinc finger HIT domain-containing protein 3 (A0A8M9PJR7)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Cytoplasm. Nucleus
InterPro domains:
Sequence:
MQLCGVCSELVPKYRCPACRIRYCSVSCFKRHKEDDSCDPVKESDPASSKPAAVSTAEEPWTVEDLLDEDSQTDKVPLQRLQQLGDSEALKGLLRNPHLRQLMMSVDSAENKAKAMKDAMQEPLFVEFADQCLKIIEPSETDNNEDDDDEY
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding), GO:0008134 (transcription factor binding), GO:0140297 (DNA-binding transcription factor binding), GO:0061629 (RNA polymerase II-specific DNA-binding transcription factor binding), GO:0016922 (nuclear receptor binding), GO:0046966 (nuclear thyroid hormone receptor binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0032501 (multicellular organismal process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0030902 (hindbrain development), GO:0022037 (metencephalon development), GO:0060322 (head development), GO:0021549 (cerebellum development), GO:0048731 (system development), GO:0048513 (animal organ development), GO:0007420 (brain development), GO:0007417 (central nervous system development), GO:0007399 (nervous system development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Muscleblind-like protein 2 isoform X10 (A0A8M9PUY2)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Cytoplasm. Nucleus
InterPro domains:
- IPR000571: Zinc finger, CCCH-type (domain) [13-238]
- IPR054429: Muscleblind-like, CCCH zinc finger (domain) [48-251]
- IPR041367: E3 ligase, CCCH-type zinc finger (domain) [181-202]
Sequence:
MALNIASIRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGRCTRENCKYLHPPAHLKTQLEINGRNNLIQQKTAAAMLAQQMQFMIPGTTMQPVPTFPVSQGLGSNPGLSYAPYLTPMSHGMGLVPTEMLPSTPVIVPGSPPVSVPSSSSTQKLLRTDKLEVCREFQRGNCARGETDCRFAHPSDSPMIDTSDNTVTVCMDYIKSRCSREKCKYFHPPAHLQAKIKAAQHQANQTAVAAQAAAAAMAFPHGVLQPLPKRPALEKSNGASTLFNPSVLHYQQALASAQLQQPTAAFFPTGSVLCMAPASSIATTPATSVPYATTAPANQIILK
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0097159 (organic cyclic compound binding), GO:1901363 (heterocyclic compound binding), GO:0003676 (nucleic acid binding), GO:0003723 (RNA binding), GO:0001067 (transcription regulatory region nucleic acid binding), GO:0001069 (regulatory region RNA binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0032501 (multicellular organismal process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0009790 (embryo development), GO:0061061 (muscle structure development), GO:0048513 (animal organ development), GO:0048731 (system development), GO:0007517 (muscle organ development), GO:0048880 (sensory system development), GO:0072359 (circulatory system development), GO:0007507 (heart development), GO:0009792 (embryo development ending in birth or egg hatching), GO:0007423 (sensory organ development), GO:0043009 (chordate embryonic development), GO:0150063 (visual system development), GO:0001654 (eye development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: NHS-like protein 1 isoform X6 (A0A8M3AKZ2)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR024845: Actin remodeling regulator NHS-like (family) [21-1491]
Sequence:
MPVKGISFWGHRKRKSPYSAVSNLDEEKKWTVHYTAPWHQQENVFLPGSRPACVEDLHRQAKVNLKTALRECDKLRKDGFRSSQYYSQGPTFSGSSSSQHEDEDLEGDDADKKSTASSGEEEKDSCQMRAQSPAQVEGVEVDGQMSSSKASVLPTPEEKMRQQAQAVLTDIVPINVTGETFDRQASIRRSLINTDTLVRRPKKVKRRKTISGVPDSVQQELAAKGRGGELRPQSMFIPGQYSTLGRVMNGNSTLRQSVTKDSGCQTEAVKIVPPSVRRIRAQKGQGIAAQMAGISTSATNISSVSDGSSTGGSIVAMAPQFGNDIQRFHSLPRGARVSLNAEPIYSSTPFRKEDSCAKAPKQIGKLQVDNTAVHMRNAPRVCTQARPKSQEVRGSQREWGSVSGPACVVSPHAAYSTSLIPNATLSCSAEVFALHSKSSPGQSPLSGSPYTKARPLSMVSVVNSGSTSSVGTGSHTPDAGMKDTCSETGQSDSSLHSHSTIAAGTLSSDEQWIYDTPDNALPRRTMTSSCSTPINHLYSSLERSSKGTDSSSLYSMDNDGYYTSMHLDSGLRSRSHGSGHGHGIGGRAVRHSMYECLGEQEDRNSLCSDHSLSRSISLRKPKKPPLPPARTDSLRRKPGKNSSPSANIGQSNIRNGSLLNESLIATLQQSLQNGLKGKGSSTSPSHSPCSDYEDPWMLRPRSQSSISASSSGVSATGMAHVYSICPVTPSHSDTSSLRSDYADSWGYYMEYPRPSGDQTQSPCTNSHSAGQVSEMANGRGPLNGNQANLPAVQEGSDMSAKPRTGTSSPDRVHRLTSPSSGYSSQSNTPTAGTPVPSFMRCMSPSGKPKPRVPERKSSLLSSVSISSSSTSLSSNTSDSNRSNIPPPPPLPAAPVVLVPLNPPSFPPPLPPPSPVCTEDQKFPPPPPPLPTTPHQQASMNPLQNNSSPEFPPPPPPEVLTDPACSGFNSSFSPPPPPPPPPLPTYSPSQNQHLPHMTPQTPSSASLKEIKGCLKPVNLEGRPVLPQSEEPNKVSMPLITPFALQSVQLRPAKRPENNEVSRTDRPQTPEKTHPTVPQISCISPNVSLSSTEEKPSIQHSQDGLVEAQTDYSVKSNSDPTSFLTNGPIDLGEATDEVDGLKTFLSTQVEKSLNSTPKKKPPMISKKPKFSLTFSSVDHVRDFVSAEVLDPIPVLEKEEETTEKSSFDISVPPVEIRDISPTNGESQEFSQSSGTTILDVDKSTSEAEDEEERDDEDVTSSTGSFSSKDDENGDVFESSTLDVAQSPSINGDSCGDMVTPTRPRTTEDLFAAIHRSKRKVLGRKESEEDRSRGPLSPPVTPTAQSPSLTSSLPRQSGSIQRSLRKSATSSDTFKALLLKKGSRSESSFRMSATEMLRSTDPRFQRTRSLDSSFDPASPTSESPCSSPGRSKRVADDWARNDGMFSTSPSLIGPKYGRSRTPPSAASSKYNARCRILSSPMTVICERDGELTDCEDPVSPSNTPLPISQDSNSTLCEQSSS
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding), GO:0046983 (protein dimerization activity), GO:0046982 (protein heterodimerization activity)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0009987 (cellular process), GO:0032501 (multicellular organismal process), GO:0048869 (cellular developmental process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0048870 (cell motility), GO:0030154 (cell differentiation), GO:0016477 (cell migration), GO:0048731 (system development), GO:0001764 (neuron migration), GO:0022008 (neurogenesis), GO:0007399 (nervous system development), GO:0048699 (generation of neurons)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0012505 (endomembrane system), GO:0005794 (Golgi apparatus), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle)
Protein: Calcipressin-1 isoform X1 (A0A8M2BFA6)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR006931: Calcipressin (family) [8-196]
- IPR035979: RNA-binding domain superfamily (homologous_superfamily) [20-109]
- IPR012677: Nucleotide-binding alpha-beta plait domain superfamily (homologous_superfamily) [10-106]
Sequence:
MHLKTMKCNPFCLIASLEDPDMFNSPVEMAGFEDLFRAFDRNVTFQFFKSFRRVRINFTNALAAAEARAKLHKSDFNGRELRLYFAQSVHIGSPHLEPPKPDKQFLLSPPPSPPVGWEQAKDATPVINYDLLCAIARLGPGEKYELQPGTPTTPSVVVHVCDNDQESSGNEEDMDGGVRQRPKIIQTRRPEYTSSVTQ
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0032501 (multicellular organismal process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0009653 (anatomical structure morphogenesis), GO:0048646 (anatomical structure formation involved in morphogenesis), GO:0001525 (angiogenesis), GO:0035295 (tube development), GO:0001568 (blood vessel development), GO:0048731 (system development), GO:0035239 (tube morphogenesis), GO:0048514 (blood vessel morphogenesis), GO:0002040 (sprouting angiogenesis), GO:0001944 (vasculature development), GO:0072359 (circulatory system development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Bridging integrator 1b isoform X2 (A0A8M3B064)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR004148: BAR domain (domain) [16-287]
- IPR001452: SH3 domain (domain) [494-565]
- IPR027267: AH/BAR domain superfamily (homologous_superfamily) [9-287]
- IPR003005: Amphiphysin (family) [1-286]
- IPR036028: SH3-like domain superfamily (homologous_superfamily) [490-564]
Sequence:
MAEVGKGVNAGKLASNVQKRLTRAQEKVMQKLGKADETKDTAFEEQVANFNKQMNEGTKLQKDLKAYLLAVKTMHECSKRLHDCLAEMYDPEWFGKEEVDSIAEEMIEKEMDNNLEDTDLLWQDFHEKLLDNAVISMDAYLAQFPDIKARIAKRERKLVDFDSARHHFASVQKGKKKDEAKIAKPLALVEKAAPVWAQGILTAHQIAQTNLTRNQAEEDLGRAQKVFEEINYDLQEELPTLWNSRVGLYVNTFRSVSGLEETFHRDMGKLNQNLSDIMTKLEEQRVANDDAANHNQETSDAPKSPSKLRDVPPVSRPPRPASSQEVKPDKIINLFEDAEVSDSNTTTQPEQGASWNSWEPAQSPAVSPSQQWDSDNEADAQPHGQPYAAPEWDDDVTPAVQSYEPPSWDEQDGAPAQSGWDGQTAAPAQPDWEDEHWDEEGSQVGQVQDTETNWANDAAQDWEAESEPPQWEELQSNEAPTVTNGSSDTELPPSVLFKVKTMHDYSATDSDELDLKAGDIVLVLPFANPDEADDGWLMGVKESHWLQNKNLLAKGVFPENFTQKL
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032501 (multicellular organismal process), GO:0003008 (system process), GO:0003012 (muscle system process), GO:0003013 (circulatory system process), GO:0003015 (heart process), GO:0008015 (blood circulation), GO:0006936 (muscle contraction), GO:0006941 (striated muscle contraction), GO:0060047 (heart contraction), GO:0060048 (cardiac muscle contraction)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0030017 (sarcomere), GO:0031674 (I band), GO:0030018 (Z disc), GO:0005737 (cytoplasm), GO:0012505 (endomembrane system), GO:0099080 (supramolecular complex), GO:0099081 (supramolecular polymer), GO:0043292 (contractile fiber), GO:0005783 (endoplasmic reticulum), GO:0043229 (intracellular organelle), GO:0016528 (sarcoplasm), GO:0043227 (membrane-bounded organelle), GO:0043228 (non-membrane-bounded organelle), GO:0016529 (sarcoplasmic reticulum), GO:0043231 (intracellular membrane-bounded organelle), GO:0099512 (supramolecular fiber), GO:0030016 (myofibril), GO:0043232 (intracellular non-membrane-bounded organelle)
Protein: RNA helicase (A0A8M9QFI7)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Cytoplasm
InterPro domains:
- IPR001650: Helicase, C-terminal domain-like (domain) [594-755]
- IPR027417: P-loop containing nucleoside triphosphate hydrolase (homologous_superfamily) [315-760]
- IPR011545: DEAD/DEAH-box helicase domain (domain) [379-570]
- IPR014014: RNA helicase, DEAD-box type, Q motif (domain) [355-383]
- IPR000629: ATP-dependent RNA helicase DEAD-box, conserved site (conserved_site) [525-533]
- IPR014001: Helicase superfamily 1/2, ATP-binding domain (domain) [374-598]
Sequence:
MSHVVVDGSHGLDQQLAVLDLNSADGQGVGTGRRYIPPHLRNKDASKNAGNAYSSGRQSGYSVAPVQSFSPKQYPQSWHPEGNQRHRQNYPTGWNDFRTGNYLEKADLLLRSSICEGMVVLSALYFCLGSQRFASQELAFYHTYTSGWPDRCASPARTDSSVATDGNEDTASVISWADRCDSPGWDGSRTNGFVNGYHDSRMNGTANFARGPLRNDRGGRGGFRGNRNGASFNQPVHNAGYGTYENKDGGWNSVVNRDAYASFGGRSDRGKSAFFNDRGASSRGRYERGGFGGGTGGNSRWVEESRDEEDWSKPMPPNERLEHELFSASNTGINFEKYDDIPVEATGTNSPGHIESFHDVDMGEIIMGNITLSRYTRPTPVQKYAIPIIKTKRDLMACAQTGSGKTAAFLLPVLSQIYSEGPGEALQATKASTQQENGKYVRRKQYPISLVLAPTRELALQIYDEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDYCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGSRQTMMFSATFPKEIQILARDFLEEYIFLAVGRVGSTSENITQKVVWVEENDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCPIMVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFYNDKNSNITKDLLDILVEAKQEVPSWLENLAYEHQHKSTNRGRPKRFSGGFGARDYRQMPGGGNTFGNRGARNTGGHGGNRGFGGNKGGFGSFGGDSYGGTYGNYGGNYTQVDWWGN
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0097159 (organic cyclic compound binding), GO:1901363 (heterocyclic compound binding), GO:0003676 (nucleic acid binding), GO:0003723 (RNA binding), GO:0003729 (mRNA binding), GO:0003730 (mRNA 3'-UTR binding)
Biological Process (BP): GO:0008150 (biological process), GO:0040011 (locomotion), GO:0002376 (immune system process), GO:0009987 (cellular process), GO:0050896 (response to stimulus), GO:0009605 (response to external stimulus), GO:0051716 (cellular response to stimulus), GO:0048870 (cell motility), GO:0042221 (response to chemical), GO:0050900 (leukocyte migration), GO:0042330 (taxis), GO:0097529 (myeloid leukocyte migration), GO:0006935 (chemotaxis), GO:0030595 (leukocyte chemotaxis), GO:0070887 (cellular response to chemical stimulus), GO:0016477 (cell migration), GO:0071621 (granulocyte chemotaxis), GO:0060326 (cell chemotaxis), GO:0097530 (granulocyte migration), GO:1990266 (neutrophil migration), GO:0030593 (neutrophil chemotaxis)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0099080 (supramolecular complex), GO:0043229 (intracellular organelle), GO:0035770 (ribonucleoprotein granule), GO:0036464 (cytoplasmic ribonucleoprotein granule), GO:0045495 (pole plasm), GO:0043228 (non-membrane-bounded organelle), GO:0043186 (P granule), GO:0060293 (germ plasm), GO:0043232 (intracellular non-membrane-bounded organelle)