lokahq/bioreason-rl huggingface dataset:
Protein: Ectodysplasin-A isoform X1 (A0A8M9QEC5)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Secreted
InterPro domains:
Sequence:
MLIDLHAAMEPKREPAKLEERERTQAACECQSQCNNCKIFLSLFILSLSLHLVTLFCYLDLRSELKREISQKNKDEVSSTGPVPHYEATEPVLQSPDTDHPTIGDQSRWRDEHTRGLDRVIHRTKRSETNGKKKGERKKGKKGPPGAPGPPGPPGPQGPPGIPGIPGIPGSNAMGPSGPPGPPGPQGPPGPQGPPGPQGPSGGEKGKHREAQPAVVHLQGQETTIQVKEDLSEGVLKNWRMISIHQRVFKMHSRSGELEVLLDGTYFIYSQVYYLNFTDIASYEVMVDKTPFLRCTRSIETGQRKFNTCYTAGVCLLRARQRISIRMVYEDTSISMSNHTTFLGSIRLGDAPSAGHT
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0032501 (multicellular organismal process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0009653 (anatomical structure morphogenesis), GO:0048731 (system development), GO:0009887 (animal organ morphogenesis), GO:0048513 (animal organ development), GO:0001501 (skeletal system development), GO:0060348 (bone development), GO:0042476 (odontogenesis)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005576 (extracellular region)
Protein: Hepatitis A virus cellular receptor 1 homolog isoform X3 (A0A8M3AMA9)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR013106: Immunoglobulin V-set domain (domain) [31-130]
- IPR013783: Immunoglobulin-like fold (homologous_superfamily) [26-137]
- IPR036179: Immunoglobulin-like domain superfamily (homologous_superfamily) [28-118]
- IPR007110: Immunoglobulin-like domain (domain) [31-113]
- IPR003599: Immunoglobulin domain subtype (domain) [24-131]
Sequence:
MTDLHSWFLSSWILCCLTICRCSDIIVQSFEGDNVTLPCKYDSRYHGKCEICWMRGDIPSRGCGEEIIASDGDKVSTRNSDRYDLAGPIQHGDVSLTIFNIDKTDSGKYGCRVHVPGWFNDEKYYVHLIVDDAIIPTTLETTSMSSSTSEHETTGVYTTAMTEAPATTPPDPLVTTISGLLTPESQTTETSGDNKTRKEISSTISPSYAPRSSTAGMWLSNTTSVEPSVSVVYHESSSAESKDNVTVSAVLVPVLLLLLALIAIAAAFMWKQKKKTRASLEVQNSEISVIYSNSGSSVGLYNREMAVENVYQIQAESEYEQWH
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0008289 (lipid binding), GO:0097367 (carbohydrate derivative binding), GO:0070891 (lipoteichoic acid binding), GO:0001530 (lipopolysaccharide binding)
Biological Process (BP): GO:0008150 (biological process), GO:0009987 (cellular process), GO:0051179 (localization), GO:0051234 (establishment of localization), GO:0071840 (cellular component organization or biogenesis), GO:0016043 (cellular component organization), GO:0006810 (transport), GO:0016192 (vesicle-mediated transport), GO:0006996 (organelle organization), GO:0061024 (membrane organization), GO:0007010 (cytoskeleton organization), GO:0006909 (phagocytosis), GO:0006897 (endocytosis), GO:0010324 (membrane invagination), GO:0099024 (plasma membrane invagination), GO:0043277 (apoptotic cell clearance), GO:0006911 (phagocytosis, engulfment), GO:0043652 (engulfment of apoptotic cell)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0009986 (cell surface)
Protein: Low-density lipoprotein receptor-related protein 1 isoform X3 (A0A8M9PE34)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR000152: EGF-type aspartate/asparagine hydroxylation site (ptm) [174-185]
- IPR000742: EGF-like domain (domain) [36-199]
- IPR002172: Low-density lipoprotein (LDL) receptor class A repeat (repeat) [35-120]
- IPR049883: NOTCH1 EGF-like calcium-binding domain (domain) [160-198]
- IPR036055: LDL receptor-like superfamily (homologous_superfamily) [32-121]
- IPR023415: Low-density lipoprotein (LDL) receptor class A, conserved site (conserved_site) [50-74]
- IPR018097: EGF-like calcium-binding, conserved site (conserved_site) [160-183]
- IPR051221: Low-density lipoprotein receptor-related (family) [32-284]
- IPR001881: EGF-like calcium-binding domain (domain) [160-199]
Sequence:
MPSCNANMLAVGLLYLGLVLALEVVDPTRAIEAPKTCSPKQFVCKDQVTCISKGWRCDGEKDCPDGSDESPDICHHTQVTQCPPNEFECRGTDVCIHLSKLCDGVPDCTDGRDEGPHCRELASKCSIMDCQYNCSVTLSGPKCYCKNGYEVGEDGKTCKDFNECAVYGTCSQTCTNSEGSYTCSCVEGYLPQLDNRSCKAKNDPVDRLPFLLIANSQNIQATSLSGANPITINDKQTTTMDFIYAQETVCWIHMGDSPTASQLKCAKFPNAKSFTEEKTINISLSLHRKTIFISVCFKSVSALHLG
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0050789 (regulation of biological process), GO:0065007 (biological regulation), GO:0051239 (regulation of multicellular organismal process), GO:0050793 (regulation of developmental process), GO:2000026 (regulation of multicellular organismal development), GO:1901342 (regulation of vasculature development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0005886 (plasma membrane)
Protein: Tripartite motif containing 69 isoform X1 (A0A8M3B6K0)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR001870: B30.2/SPRY domain (domain) [353-549]
- IPR003879: Butyrophylin-like, SPRY domain (domain) [369-530]
- IPR043136: B30.2/SPRY domain superfamily (homologous_superfamily) [369-548]
- IPR058030: TRIM8/14/16/25/29/45/65, coiled-coil region (domain) [233-342]
- IPR003877: SPRY domain (domain) [423-548]
- IPR013320: Concanavalin A-like lectin/glucanase domain superfamily (homologous_superfamily) [371-534]
- IPR017907: Zinc finger, RING-type, conserved site (conserved_site) [91-100]
- IPR050143: Tripartite motif-containing (family) [73-536]
- IPR000315: B-box-type zinc finger (domain) [162-203]
- IPR013083: Zinc finger, RING/FYVE/PHD-type (homologous_superfamily) [60-153]
- IPR006574: SPRY-associated (domain) [370-422]
- IPR027370: Zinc finger, RING-type, eukaryotic (domain) [76-111]
- IPR001841: Zinc finger, RING-type (domain) [76-122]
Sequence:
MRETPANFQQDQNPETPPILSPSQQESQSRRARRTEQSMSSSLPAQNKMDKQKLRPEIPPRVSKSSAQRLSRDLTCSICLDLFKQPVSLPCDHTFCEACITSYWSGPRVKCQAGSGSCPQCRKVFHGKSYRPNRIVANIVESYCQGMEESGVRLGAVSEPAPTAPLCMRHREELKLYCEEDQELVCLVCGISQDHRAHTLVCVQDAQKRYRASLTTSANALQKELNTALECERETEEEVKKLKDHTADLKQRIEAQFSELHQFLYQEEKLLQVKLKTEERRELIRLDEHKALLSVEISRLRRAVNDIEDKLSEQDPYTLLRSIKGLLQSRQPPKFERPTLTPPSLCEGRFAGPLQYRVWKSLKGSIYPVPSAITFNSKTANPWLSLTSSLTCVRYQTFNSSVQDNPQRFNAALSLMGGQGFTKGRHYWEVEVYSSTVWTVGVARESVTRKGVINTMPANGFWTLSLSYGVQYMAGTSPPTLLSLEEPLARIGVYLDYKRGLVSFYNAESMTHLYTFRDTFTETLFPYFNLGFLDKVHENEPLKVFMPKI
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0050789 (regulation of biological process), GO:0065007 (biological regulation), GO:0032501 (multicellular organismal process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0050794 (regulation of cellular process), GO:0010941 (regulation of cell death), GO:0060322 (head development), GO:0048731 (system development), GO:0048513 (animal organ development), GO:0007420 (brain development), GO:0043067 (regulation of programmed cell death), GO:0007417 (central nervous system development), GO:0007399 (nervous system development), GO:0042981 (regulation of apoptotic process)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005737 (cytoplasm), GO:0005622 (intracellular anatomical structure)
Protein: ubiquitinyl hydrolase 1 (A0A8M9QGK5)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR018200: Ubiquitin specific protease, conserved site (conserved_site) [169-610]
- IPR001394: Peptidase C19, ubiquitin carboxyl-terminal hydrolase (domain) [168-656]
- IPR028889: Ubiquitin specific protease UPS, catalytic domain (domain) [168-659]
- IPR009060: UBA-like superfamily (homologous_superfamily) [4-72]
- IPR003903: Ubiquitin interacting motif (conserved_site) [30-142]
- IPR054109: UBA-like domain (domain) [15-59]
- IPR054108: Ubiquitin carboxyl-terminal hydrolase 25/28, UIM (conserved_site) [81-131]
- IPR038765: Papain-like cysteine peptidase superfamily (homologous_superfamily) [163-656]
- IPR050164: Ubiquitin carboxyl-terminal hydrolases (family) [111-659]
Sequence:
MTVEQNVLQQHSQKHQQTLLNQLREVTGTTDVQLLQQALQVSNGDLVEAVAFLTEKNAKVPQQDEATYYQTAQITNDRYISVGSQADTNVIDLTGDDKDDLQRAIALSLEESNRAFRETGITDEEQAISRVLEASIAENKASLKRTHTEVWSDSPNPHERKRMENCPVGLKNVGNTCWFSAVIQSLFNLLEFQRLVLHYSPPARMQDLPRNQKEHRNLPFMQELRHLFSLLVGSKRKYVDPSGAVEILKDAFKSSESQQQDVSEFTHKLLDWLEDAFQIKAEEDREGEKPKNPMVELFYGRFLAVGVLEGKKFENTEMFGQYPLQVNGFKDLHECLEAAMIEGEIESLHSAENSAKSGQEHWFTELPPVLTFELSRFEFNQALGRPEKIHNKLEFPSMLYMDRYMDRNREITRIKREEIRRLKEHLTVLQQRLERYLSYGSGPKRFPLADVLQYAMEFASSKPVCTSPVEDIDTTAPPGGTIAQLPPPASAGEQPDACVSAEGSGSGLQASQQQQQRVSIHKPFTQSRVPPDLPMHPAPRHITEEELRVLESCLHRWRSEVENDTRDLQASISRIHRTIELMYSDKSMMQVPYRLHAVLVHEGQANAGHYWAYIYDRHHQRWMKYNDIAVTKSSWEELVRDSFGGYRNASAYCLMYIDDKKPFLIQEEFDKETGQMLSGLDKLPPDLKVFVEADNKLFEREMEEWDALQARKLQQEKLALAAAAAAAAAASVAVQPMSTEPCSPDNTAPSAAPQHDPEYMEQQSPSGDSKHLQEDTERAISKAAAEHDEKSPEALLNTAMMTPNMQGIIMAIGKSRSVYDKCGPEAAFFKAMKVEYTRLLRLAQEDTPPERDYRLQHVIVFFIHNEAPKKIVERTLLMQFADRNLGFDERCKSIMKVARAKLELIKPDEVNLEEYEMWHQDYRIFRETSVFLLIGLELFMKKSFVEALMYLIYAYQYNKELLAKGPYRGHDEELIAHYRRECLLKLNEYAAALFETGEEAKVNTGLSIMNDLVVPCLPLLLVDEMEEKDMVAVEDMRNRWCSYLGQEMEPNLQEKLTDFLPKLLDCSTEIKSFHEPPKLPSYSTLELFERFGRVMTSLTMGRTPADGR
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0032501 (multicellular organismal process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0007389 (pattern specification process), GO:1904888 (cranial skeletal system development), GO:0003002 (regionalization), GO:0009953 (dorsal/ventral pattern formation)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Thyrotrophic embryonic factor isoform X1 (A0A8M2B278)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Nucleus
InterPro domains:
Sequence:
MKPISITMDAGAETSAAFPVVLKKIMETPPPNLLEGDDENDKEKLFESVESGGVSEMGPSAALTPAIWEKTIPYDGDTFHLEYMDLEEFLMENGIAAAENEQKSSEKENIQLTAEEPSTASAVKTAPAVTLLPVMALDPCEEEVVTITTSSSSSADNKSEENRMTPDPINPDEIEVDVNFEPDPTDLVLSSIPGGELFDPRKHRFSEEELKPQPMIKKAKKVFVPEDQKDDKYWQRRKKNNVAAKRSRDARRLKENQITVRAAFLERENSALRQEVAELRKDFGRCKNTVARYEAKYGALGPEEDV
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0065007 (biological regulation), GO:0048518 (positive regulation of biological process), GO:0050789 (regulation of biological process), GO:0048522 (positive regulation of cellular process), GO:0019222 (regulation of metabolic process), GO:0050794 (regulation of cellular process), GO:0009893 (positive regulation of metabolic process), GO:0010604 (positive regulation of macromolecule metabolic process), GO:0031325 (positive regulation of cellular metabolic process), GO:0009889 (regulation of biosynthetic process), GO:0051171 (regulation of nitrogen compound metabolic process), GO:0060255 (regulation of macromolecule metabolic process), GO:0031323 (regulation of cellular metabolic process), GO:0080090 (regulation of primary metabolic process), GO:0009891 (positive regulation of biosynthetic process), GO:0051173 (positive regulation of nitrogen compound metabolic process), GO:0010557 (positive regulation of macromolecule biosynthetic process), GO:0045935 (positive regulation of nucleobase-containing compound metabolic process), GO:0051254 (positive regulation of RNA metabolic process), GO:0010556 (regulation of macromolecule biosynthetic process), GO:0031326 (regulation of cellular biosynthetic process), GO:0019219 (regulation of nucleobase-containing compound metabolic process), GO:0051252 (regulation of RNA metabolic process), GO:0031328 (positive regulation of cellular biosynthetic process), GO:0010468 (regulation of gene expression), GO:1902680 (positive regulation of RNA biosynthetic process), GO:2001141 (regulation of RNA biosynthetic process), GO:0006355 (regulation of DNA-templated transcription), GO:0045893 (positive regulation of DNA-templated transcription), GO:1903508 (positive regulation of nucleic acid-templated transcription), GO:1903506 (regulation of nucleic acid-templated transcription)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Leucine-rich repeat transmembrane neuronal protein 4 isoform X2 (A0A8M3B365)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
Sequence:
MGSLACDMRLAGLLLLQASSLLLFSSGERMCPYSCHCEGKIVHCESSAFQDVPENISVSCQGLSLRYNDLHTMLPYQFAHLNQLLWLYLDHNQIMFVDSRAFQGVRRLKELILSSNRISQLHNVTFHGVPNLRSLDLSYNKLQELQPGQFYGLRKLQNLHLRSNGLTAIPVRAFLECRSLEFLDLGYNRLRVLTRTAFLGLSRLMELHLEHNQFSRINFFLFPRLANLRALYLQWNRIRAVNQGLPWSWYTLQRLDISGNEIQVLDPVVFQCLPNLQVLNLESNKLANVSQEVVAAWISLTTISLAGNMWDCGPGICPLVVWLKNFRGTKDTNIICSSPKHLQGEKVIEASKNYIDCDDYEITAQSPLYLQTFDPNYDLALEPTEPTMAPTTPPPPLPSPASEAPFPPPQPRPPHRPTFPSRTNTDPRDSHQRTPSSFDSSLVTPVPEQDNVSFHKVVMGGVALFFSVSLVLSVIYVSCKRYPGATRLLQQSSVGRKRRKKSQEPEQNLSSQLQEYYMSYNPAATPEALEVLGNGTGTCTCTISGSRECEV
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding), GO:0042802 (identical protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0009987 (cellular process), GO:0065007 (biological regulation), GO:0050789 (regulation of biological process), GO:0065008 (regulation of biological quality), GO:0071840 (cellular component organization or biogenesis), GO:0050794 (regulation of cellular process), GO:0016043 (cellular component organization), GO:0051128 (regulation of cellular component organization), GO:0032970 (regulation of actin filament-based process), GO:0090066 (regulation of anatomical structure size), GO:0044087 (regulation of cellular component biogenesis), GO:0032535 (regulation of cellular component size), GO:1902903 (regulation of supramolecular fiber organization), GO:0033043 (regulation of organelle organization), GO:0032956 (regulation of actin cytoskeleton organization), GO:0043254 (regulation of protein-containing complex assembly), GO:0032271 (regulation of protein polymerization), GO:0110053 (regulation of actin filament organization), GO:0051493 (regulation of cytoskeleton organization), GO:0030832 (regulation of actin filament length), GO:0008064 (regulation of actin polymerization or depolymerization), GO:0030833 (regulation of actin filament polymerization)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0032991 (protein-containing complex), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0098796 (membrane protein complex), GO:1990351 (transporter complex), GO:0098797 (plasma membrane protein complex), GO:1902495 (transmembrane transporter complex), GO:0005886 (plasma membrane), GO:0034702 (ion channel complex), GO:0008076 (voltage-gated potassium channel complex), GO:0034703 (cation channel complex), GO:0034705 (potassium channel complex)
Protein: Rho guanine nucleotide exchange factor 28 isoform X2 (A0A8M9QEQ0)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Cytoplasm
InterPro domains:
Sequence:
MELSRGEVPLYGQVEVCVKLPLSEFVQEETDYYVLLVGSSLHHVTAAHRTEDHSSIRFTVPGHIVPEKVSVEVYSCTKESKSPISPFCHSEKLSVEYILDEVQEVAEQLMNFETLTSSSHQDILKKLYPKKKVFSEKNHVEQTAQHGTDGVCDPHGGLLQLESLAETEQGFNVCEQGNLSQSEVSGTEEFDPEQHSSVDEKVTQALANLHFLGWDGQAGQENQVLLPRETPLHVAMRLGFPHLSHFLLREFNGQMMVSIANEEGHTPVALAEKHGDPVLITALTHGSALRPVWMCQIWTDCSQQLRICPVTDSISLTVRHQTLINVQNSIQLYREKSKEPDILTRVRHLSELSEGSVHRSDECDADLNNSLKIEDQTLVDSVFEEQLVLCLDEEDEDLSVFNSEKQFSSPGSCTPFHLHSSAAAAVRLTAMLKGSTKDSELNMKYAVPGATEDSSGTDSGMWRMSDTGVSSPGTIDISPTVKDDEGQRGRYPASRSFSPTSPAGLMLDRFMRATRTTELTYNSSSSPTESCDLSPSLVALEMDSEEDDDDDILMKKPLPQLQPDSKDSTDEQVMSSPAPVLICTRSHSASSACNPAPAKDVEQGVRLRSYSYTSPKISLLPPRFSRDAHPPPADLSQDGVLSSSSGSKSLLHALSLSKSLSLFNPVKHRSSSTSEQPQEKRELRFRRRAQSADDESSAELADSLQHLTLSEFLKEIEEEEWDKYIIPSKTESEKYKVSRTFSFIKSRMYSTRNKNKGKGKEKETKDKQVNGHQFTAGSVLGSTLCEICSKPASGKEVVHCTHCAVSVHKGCKDSSTPCLKKPQDKYSVMTVKSKTASLPQNFIVRESSSSSLQISTSASLPVMTSRDSAPLPCPLSRSVPLTTERLSESPEADSDSNLWRNHIQSEELLQTMESSTSTDSSIIEDSVDSPLQIELLMNAVDLEAESWSLAVEAQFCRMQEKRIIKRQDVIYEFMQTELHHVQTLMVMAEVFRRGMRDEVGLDAETIGRIFPCLDELLQLHRDFLTAMRERRQSCVQNNSSKNFLIHRVGDIFLQQFSQENAEKMKQVYGEFCSHHTEAVSYFKELQQQNKRFQLFIKQQSSNSLVKRREIPECILLVTQRITKYPVLLERILQYTDEGTEEHSDLSRALVLIRELISAVDQYVSQYEQNQKLSEVLGRMENKCSTKLKTGCTFRKQDITSGRNLLHQGPLLWKTATGRLKDVLAFLLSDSLVFLQEKDQKYIFATVDQKPPVISLQKLIVREVANEERGMFLISASSAGPEMYEVHAASKDERNAWMRLIREAVENCPEEEDETTSESEEERRVTEAKVQKIHRLQETLCGHDHLICSNLEEKLHIYAELSVMAGQREAGPEPRLLVRPSTEDVPQAGVLLSAALREAESLRAALSSHCASTPPVPSGPEDLNKPEPCTPPSPLPPESPLTDPIQSEEEEWRTEESSEAQTFNHNSDSDHNLQLKVSQSVQSLTQLLYSLQAAVTIQDSCYEVQKLLLLLMSSPAPNQQSRPLSITRSGQALHEQERQREAERRREELADVARLRGALVRERQQWERECQARQLQHSELETTLEQRELLCHLEERRLQSERQELQEQLQEYQQSLERLREGQRNVEKEKEKLETQKMLLEGLKHGCQQNLPAMVIPLDGQQTQNHLGIQDEHGSIFVNEAAFISSSVNNRHLHLQHHPQHHHQTVHVHSGSIGYSDSPSAQNSLNSLLARSNHRPSSAGASDHSWTSLRSLTESANNNVGQISHVEESWSAGVTGAGLHQTDVLLVSQPFLSMETENRDTDGEETIVYL
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0009987 (cellular process), GO:0048856 (anatomical structure development), GO:0071840 (cellular component organization or biogenesis), GO:0009653 (anatomical structure morphogenesis), GO:0007155 (cell adhesion), GO:0016043 (cellular component organization), GO:0061061 (muscle structure development), GO:0009887 (animal organ morphogenesis), GO:0048729 (tissue morphogenesis), GO:0009888 (tissue development), GO:0031589 (cell-substrate adhesion), GO:0048513 (animal organ development), GO:0007160 (cell-matrix adhesion), GO:0048644 (muscle organ morphogenesis), GO:0007517 (muscle organ development), GO:0060415 (muscle tissue morphogenesis), GO:0006996 (organelle organization), GO:0010256 (endomembrane system organization), GO:0007030 (Golgi organization)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005737 (cytoplasm), GO:0005622 (intracellular anatomical structure)
Protein: Collagen, type XVII, alpha 1a isoform X3 (A0A8M9PH43)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR008160: Collagen triple helix repeat (repeat) [624-1322]
- IPR050938: Collagen and Collagen-like Structural Proteins (family) [702-1108]
Sequence:
MDKLTTTKIVKVEGGSGGSGKEIQKHTETVTTTRLTSLPPKAHSGQQILTSIGNGSGSAGGAVLLEKKFITHSSAEGGASRSYVISSSSSGSSASSSSGAGSVISGFDGISGEISVTGPITSSTVKSSTSAVKSSSVVSTSITSSSAAGGELSSGYGSISSSSSEFVSGSSGGSISTSEGSMSKSRSGGGSSAVMSGEGTSSSKTVSKFSSSSPSGTRKGLSYSTVPTERKTIMNITTGGYEGSSSGNSSPEYIKKEYVSTSSAATRGRTQTRESEIRARLQSASPSARWTELDDVKRLLKGSRSGSISPPRSPTSTLPIPKKASIDVRHESQSGFDGTVLDAGFSGYYTNPNNLSYTTLQQPSSPTVYGMQNNLSTSGGAMMANGRCTGYVYGVPKNVGSAGLATTISAIPSSPITADDVFMKDGKLIAIGKENVAAKTETERLIMSKNTGKQFVPSSFNAGADTFSEDSLKREKKMISSATDPQTTTITGSKSSTKNKATYADIRKDDSDGAGCGFWTCCSWWKWLLALLFALLLLLGLLCGLIALGEQLRRLKARVDAIDGGGTSPRTSGLKTDDIPGVQSGNTINLGYEPAGQDSLILQRAILRELQSDTIRASLATSLRGERGEPGPKGDQGPPGVKGDSGFPGIPGPPGLIGHPGQEGPRGPKGSAGESGSDGLPGPRGREGPAGPRGEPGPPGIGEKGEKGSFGDVGAPGIAGPPGPVGPKGDAGAQGVPGLTGAPGPQGFRGDSGDPGPKGDKGPAGPPGVKGDQGERGPRGATGEPGQPGPAGPPGEKGLKGSTGAPGPDGVKGLRGDQGPVGLPGARGPSGPPGDSGIPGTPGLQGPPGLPGTPGQPGAKGEAGEPGRVISAGANANTVAVSGPPGPPGAPGPAGPPGLSGPIGPAGLPGSPGAKGDKGDKGEDGKPGVTESAGTEKSEAGEPGPPGPPGPPGPPGDDGKPGVGEPGPAGPPGEKGEPGSFVPTSETFFAGPPGPPGPIGPKGSQGDVGPQGFPGQPGLPGEPGIGIPGQPGSPGPRGEQGLDGPLGPQGPQGPMGPMGPEGPKGDAGVPGAPGIPGYSYGGGSRSAPGPPGPPGPPGPPGEPGSQGDGSPNAVQQISDYLRSEPIRQYLAGPPGPPGPPGPSGSASDDALASRVIEYLQRDEVRQYLIGPPGPPGPPGVPGGYGFNTQEVAGRVMSLINDAGFRGLPGPPGPPGPQGPPGNSGGLVSYAANENQQHIRAEPQEYIKSHPRADENLDYTAIAKQVSDYIKAHGLLNGNAGFPGAPGRQGYPGPPGFPGEPGTPGQPGPPGQAGPPGLPGPPGLDTVHNYSNMTAVLDYIKENHMKGQKGDLGFPGIPGSPGIDGKQGIVGLPGIKGQKGERGEATYVNRRRRRSTVI
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0048856 (anatomical structure development), GO:0009888 (tissue development), GO:0008544 (epidermis development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0030054 (cell junction), GO:0070161 (anchoring junction), GO:0030055 (cell-substrate junction), GO:0030056 (hemidesmosome)
Protein: Aftiphilin isoform X1 (A0A8M3AIZ7)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR029205: Aftiphilin, clathrin-binding box (domain) [517-585]
- IPR046359: Aftiphilin-like (family) [1-727]
Sequence:
MEPDVVRLYSSSPPPLDETGEEEEEDEFGEFGGFDGGGVSSSFSLSELDTPTTYDQSNALEDSPPDLIIKCTQNIIVSENNGWTNEKERETESISSFGIAEKESSGILTNGMTSSDLQVELSDRSDQNSPSMGSDVQNSSTGDEHSLSNGYSESCSNSDLDQSLHNCLQSTHIEVNYGRDASIADVLDKSRITDKLPDSNNHSSCTEACELRDTEAGMEICGNSQFLSSCRDAQEVEGEQDQSENCFAADCLEESMDHVDKAEAETVSSVDADLISDMQLSGDTIEIHGSFANSEVGIDADVETSADPTADEDFCDFRDATQGFTDFSRTESMTQEGLPEFVTAMSRCSTDDDFGDTDTLKDFKEEDELAEEMAGEEGGFCSELPPSDSFADFSSAPFEGAAGGEDDGWAAFAPRESPKGDQDSWATFGEEQSTYAGKEEQDVETSSAPSREDIQSSTVDFSCKIQHLFKTAFPLDVHAEVSEVTEVLPLHKFLPAQDPQEQRDPSSSFFAQENALVMWRHLQDILGSHGLKFKWAGSHSNRILLNCLGIRNILFTGDKNQPLIVPMFAAGLGMLEPTKESQKSPASPALCPSAPLESGNILCTQVAPSLAISIDAQDEGISKLNLDYFGPVDECSSDSETDTPLPGVDPEIYELTTAKMENNTTGRNIADAFTKLMESIEKTKPTVRKPETDEEMSEEAAKVISLLPDLSFMKARVLMFPSILTPAANHT
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0009987 (cellular process), GO:0007017 (microtubule-based process), GO:0007018 (microtubule-based movement), GO:0003341 (cilium movement)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005737 (cytoplasm), GO:0005622 (intracellular anatomical structure)