lokahq/bioreason-rl huggingface dataset:
Protein: SHC-transforming protein 1 (A0A8M6Z1Z9)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Cytoplasm
InterPro domains:
- IPR051235: Centrosomal Protein 152/SHC-Transforming Protein (family) [4-389]
- IPR006019: Phosphotyrosine interaction domain, Shc-like (domain) [179-350]
- IPR006020: PTB/PI domain (domain) [190-370]
- IPR000980: SH2 domain (domain) [496-589]
- IPR035676: SH2 adaptor protein C, SH2 domain (domain) [490-593]
- IPR036860: SH2 domain superfamily (homologous_superfamily) [489-593]
- IPR011993: PH-like domain superfamily (homologous_superfamily) [178-344]
Sequence:
MELVPKTKYTPFRSDSFSSTDETASNPSLPSSAPLTPLTPPGIPPSLSSSSLTPILPPSSPRQAENSPTTLCSFFPRMGALRLGVSSTLLPGLKASSRPANVPGSQGGLGESSEDTGTVNSSPPRLLPLLSLTAPSPPPRPPQDMNRLGGASRRARVEGGQLGGDEWTRHGSFVNKPTRGWLHSDIVVSTSGVSYTVRYMGCVEVLQSMRALDFNTRTQVTREAISVVCEAVPGAKGAQRRRKPSSRCLSSILGKSNLQFAGMTITLTVSTSSLNLMAIDCKQIIANHHMQSISFASGGDPDTAEYVAYVAKDPVNQRACHILECSEGLAQEVISTIGQAFELRFKQYLKNPPKVVTPHDRMAPFDGSAWEEEEEDLAPPPEVPYYNNFPGKQPPPGGLVDMRTRPGHSTGPTLPYGQPSQNDIHKQPLPPLPVGVKDGGLFDDPSYVNVDKPRLPASAAANGNAHRDAFDMKPFDAALVVSGAVALPLAEQLQNEPWFHGPLSRRQAERLLTKDGDFLVRESGTTPGQYVLTGQQGGQPKHLLLVDPEGVVRTKDHRFESVSHLISYHMDNRLPIISAGSEVCLQQPVDRKA
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0098772 (molecular function regulator activity), GO:0005488 (binding), GO:0030234 (enzyme regulator activity), GO:0140677 (molecular function activator activity), GO:0005515 (protein binding), GO:0005102 (signaling receptor binding), GO:0008047 (enzyme activator activity), GO:0060589 (nucleoside-triphosphatase regulator activity), GO:0005096 (GTPase activator activity), GO:0030695 (GTPase regulator activity), GO:0030215 (semaphorin receptor binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0032501 (multicellular organismal process), GO:0048646 (anatomical structure formation involved in morphogenesis), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0009653 (anatomical structure morphogenesis), GO:0001525 (angiogenesis), GO:0035295 (tube development), GO:0001568 (blood vessel development), GO:0048731 (system development), GO:0035239 (tube morphogenesis), GO:0048514 (blood vessel morphogenesis), GO:0001944 (vasculature development), GO:0072359 (circulatory system development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005737 (cytoplasm), GO:0005622 (intracellular anatomical structure)
Protein: SPARC-related modular calcium-binding protein 1 isoform X8 (A0A8M9P8R7)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR037639: SMOC-1, extracellular calcium-binding domain (domain) [340-454]
- IPR000716: Thyroglobulin type-1 (domain) [117-321]
- IPR051950: Developmental regulator and protease inhibitor (family) [10-469]
- IPR011992: EF-hand domain pair (homologous_superfamily) [339-456]
- IPR036058: Kazal domain superfamily (homologous_superfamily) [40-86]
- IPR019577: SPARC/Testican, calcium-binding domain (domain) [386-449]
- IPR002350: Kazal domain (domain) [35-87]
- IPR036857: Thyroglobulin type-1 superfamily (homologous_superfamily) [109-319]
- IPR018247: EF-Hand 1, calcium-binding site (binding_site) [397-446]
Sequence:
MNCHNLALCVFMYLMVMRLPAASTQKSTGPRWLIGDRESPCSTSCSRSHGKPVCGSDGRSYDTNCDLERAKCRDRTLTLAHRGRCKGKNWVRIDQPLLVPTLVSEVKELTGMKEAGQTKCRTERIQALEQAKKPQESIFIPECNDDGTFAQVQCHTLTGYCWCVTTDGKPVSGSSVQNKTPVCSGSVTDKPPGPPSSGKKDDGSKPTPTMEPHVVPEGEEITAPTLWIKQLVYKENKQNSSNSRKSEKVPSCDQERQTAQDEARQNPREAIFIPDCGLQGLYKPVQCHQSTGYCWCVLVDTGRPIPGTSARYKKPECDSAARSRDTEMEDPFRDRDLTGCPEGKKVEFITSLLDALTTDMVQAINSPTPSGGGRFVEPDPSHTLEERVVHWYFAQLDNNGSHDINKKEMKPFKRYVKKKAKPKRCARKFTDYCDLNKDKTISLQELKGCLGVNKEGSTTSSSQGTRQGTNLFSKVFGPEDRKLQKMRQ
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0043167 (ion binding), GO:0043169 (cation binding), GO:0046872 (metal ion binding), GO:0005509 (calcium ion binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0032501 (multicellular organismal process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0009653 (anatomical structure morphogenesis), GO:0048646 (anatomical structure formation involved in morphogenesis), GO:0060900 (embryonic camera-type eye formation), GO:0009887 (animal organ morphogenesis), GO:0048729 (tissue morphogenesis), GO:0048598 (embryonic morphogenesis), GO:0009888 (tissue development), GO:0048731 (system development), GO:0048513 (animal organ development), GO:0009790 (embryo development), GO:0048568 (embryonic organ development), GO:0048562 (embryonic organ morphogenesis), GO:0048880 (sensory system development), GO:0007423 (sensory organ development), GO:0090596 (sensory organ morphogenesis), GO:0002072 (optic cup morphogenesis involved in camera-type eye development), GO:0002009 (morphogenesis of an epithelium), GO:0060429 (epithelium development), GO:0016331 (morphogenesis of embryonic epithelium), GO:0048592 (eye morphogenesis), GO:0001654 (eye development), GO:0048048 (embryonic eye morphogenesis), GO:0031076 (embryonic camera-type eye development), GO:0150063 (visual system development), GO:0043010 (camera-type eye development), GO:0048593 (camera-type eye morphogenesis), GO:0048596 (embryonic camera-type eye morphogenesis)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0030312 (external encapsulating structure), GO:0031012 (extracellular matrix), GO:0062023 (collagen-containing extracellular matrix), GO:0005604 (basement membrane)
Protein: tRNA-splicing endonuclease subunit Sen54 isoform X3 (A0A8M9PHH1)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR024337: tRNA-splicing endonuclease, subunit Sen54 (family) [1-408]
- IPR024336: tRNA-splicing endonuclease, subunit Sen54, N-terminal (domain) [2-37]
Sequence:
MRGKFWQTMGFSERGKQYLQPEEALYLMECGNVQVFYRDLPLSIQDGYERFLSSDTVTLHQYQVFGHLKRLGYVVNRFDPSHLSHSSVSSTYERQLNLPASDKQKKQLKRKRSQSPVSSDKHGISTEEKTTSEAHNELAETSKLPADLQEPVHLADAPERTWWMEEDVQQKHPKTQTAAPRWDFSSISFPDLGSRRRSERLASPHRSLLPENVDVGECDVSRWLGRLNMKQEKLSRRDMERQRERDRYRRDVNSDREVRRCRNWAEYSELMEERRRRRRKHRPEHLWEREETPLTQPGQCTSHRELLDQIGIIKSSTFSEGLSRLSPSDQWKISFDVYQPDTVAEFKKSHPGKPYTRMCVCSFAGPVPDLHAVKQLSFQSQDVPVTFAVVDHGDISFYCFKDFKLPTDVY
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0032501 (multicellular organismal process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0009653 (anatomical structure morphogenesis), GO:0060322 (head development), GO:0009887 (animal organ morphogenesis), GO:0048731 (system development), GO:0048513 (animal organ development), GO:0007420 (brain development), GO:0007417 (central nervous system development), GO:0048854 (brain morphogenesis), GO:0007399 (nervous system development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Protein unc-119 homolog B (A0A8M3AR02)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR051519: PDE6D/unc-119 myristoyl-binding (family) [23-252]
- IPR037036: GMP phosphodiesterase, delta subunit superfamily (homologous_superfamily) [68-253]
- IPR014756: Immunoglobulin E-set (homologous_superfamily) [96-250]
- IPR008015: GMP phosphodiesterase, delta subunit (domain) [98-250]
Sequence:
MDGEGVKEPHSEDEMEHELSSDDQAERDEDEAEDDEEEMADAQDRGGLRNVEDWNGFISGGPAAEEEALLDWKPGDPVTPQYVLRLPGYTDDYMCSPEDNIYNISFSRFKIRDLEGGCVILDLKRHCPTEIKDMIELDAGRFIQYHFSPAFLNLREIGAMLEFTVGGKAVNKFRLIEKHYFRDLLLKTFDFEIGFCIPHSRNTCEHIYCLPDLDPHTIEEMINHPFETRSDSFYFANNTLIMHHKAEYSFSQGLQNNQNQS
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0065007 (biological regulation), GO:0009987 (cellular process), GO:0050896 (response to stimulus), GO:0050789 (regulation of biological process), GO:0032501 (multicellular organismal process), GO:0009628 (response to abiotic stimulus), GO:0050793 (regulation of developmental process), GO:0071840 (cellular component organization or biogenesis), GO:0065008 (regulation of biological quality), GO:0040008 (regulation of growth), GO:0007610 (behavior), GO:0050794 (regulation of cellular process), GO:0001558 (regulation of cell growth), GO:0016043 (cellular component organization), GO:0051128 (regulation of cellular component organization), GO:0090066 (regulation of anatomical structure size), GO:0009314 (response to radiation), GO:0048638 (regulation of developmental growth), GO:0007632 (visual behavior), GO:0061387 (regulation of extent of cell growth), GO:0030516 (regulation of axon extension), GO:0032535 (regulation of cellular component size), GO:0009416 (response to light stimulus), GO:0007634 (optokinetic behavior), GO:0071632 (optomotor response), GO:0048841 (regulation of axon extension involved in axon guidance), GO:0008361 (regulation of cell size)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0042995 (cell projection), GO:0120025 (plasma membrane bounded cell projection), GO:0043005 (neuron projection), GO:0030424 (axon)
Protein: Mitochondrial carrier homolog 2 isoform X1 (A0A8M9Q165)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Membrane; Multi- pass membrane protein. Mitochondrion outer membrane; Multi-pass membrane protein
InterPro domains:
- IPR018108: Mitochondrial carrier protein, transmembrane region (repeat) [114-202]
- IPR023395: Mitochondrial carrier protein domain superfamily (homologous_superfamily) [8-285]
Sequence:
MADTCGQVLLGSGLTVLSHPLMYIKVLVQVGHEPLAPTLGRNMFGRQVYQLPGLFAYAKHIIKIDGKAGLFKGLAPRLCAGTIGTIVHSKALQCQEEKIEVLGSSLKSDEGSLQQVINETTKEMIARSCATVVTHPFHVITLRCMVQFIGREAKYSGVFDSIVTIYREEGILGFFAGLIPRLLGDVLSLWICNMLAHFINTYTIDESTSHTGEIKNCSQAVTGFFASMLTYPFVLVSNMMAVNNCGLAGGLPPYAAIYPNWLHCWSHLSREGNMSRGNSLFFRKLPAGKTYAIEQKRFF
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005215 (transporter activity), GO:0022857 (transmembrane transporter activity), GO:0005126 (cytokine receptor binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0009987 (cellular process), GO:0032501 (multicellular organismal process), GO:0048869 (cellular developmental process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0035295 (tube development), GO:0009888 (tissue development), GO:0030154 (cell differentiation), GO:0048731 (system development), GO:0048513 (animal organ development), GO:0048732 (gland development), GO:0055123 (digestive system development), GO:0060612 (adipose tissue development), GO:0045444 (fat cell differentiation), GO:0048565 (digestive tract development), GO:0061008 (hepaticobiliary system development), GO:0061448 (connective tissue development), GO:0001889 (liver development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0005886 (plasma membrane)
Protein: Huntingtin-interacting protein 1 isoform X2 (A0A8M2B3I8)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR011417: AP180 N-terminal homology (ANTH) domain (domain) [6-270]
- IPR002558: I/LWEQ domain (domain) [759-1000]
- IPR013809: ENTH domain (domain) [1-126]
- IPR008942: ENTH/VHS (homologous_superfamily) [1-121]
- IPR032422: Huntingtin-interacting protein 1, clathrin-binding domain (domain) [449-547]
- IPR030224: Sla2 family (family) [5-1008]
- IPR035964: I/LWEQ domain superfamily (homologous_superfamily) [762-952]
Sequence:
MDSNKMAVSINKAINTQEVAVKEKHARTCILGTHHEKGAHTFWLAVNRLPLSSNAVLCWKFCHVFHKLLRDGHPNVIKDSMRHKADLNDMSRMWGHLSEGYGKLCSIYLKLLITKMEFHIKNPRFPGNLQMSNRQLDEAGENDVNNFFQLTVEMFDYLECELNLFLGVFSSLDMSRSVSVTAAGQCRLAPLIQVILDSSHLYDYTVKLLFKLHSCLPADTLQGHRDRFQEQFKKLKSLFYRSSNLQYFKRLIQIPQLPENPPNFLRASALSEHISPVVVIPAEASSPESEHVVETEDLVDTDIPPLTGTGDSKFDDLFGTSAATDPFNFNSQNGMRKDDKDRLIEQLTAELQALKEELESFRLESGRLCQALRGRVNELEAELAEQTHLKQQALGESEFLRAELDDLRRVKEDTEKEQRSLSEIERKAQANEQRYTKLKEKYTELVQSHADLLRKNAEVTRQMTVARAAQDEVENVKKEMQDRLKVAQDSASQQEKAQLEQLQALQAELMSSRTELETLKSTVTSSQQSNEQLGTQLSALVAEKAGLVETVSRKEVELSGLGAELERLQSSLTNERESGVKAAEALQNQLNEKESREQALESELVSLRWASLRAALEEAGKIVQDSLNQLEDPAHISCTSSADYLVSRCQVALDCVERLRSSRDGFVSDNTDVSGLVRAVTQFAHLVGDVIVQGSATSHMVPVEQADALADSVKACGAEALTLLCQLKEQESMGAADCSRLRTALDSVKALGEKLRPRGLELQQGELGDLVEQEMAATSAAVESAAARIEEMLNKSRAVDTGIKMEVNERILASCTDLMQAIRVLVLSSKDLQRDIVESGRGAASMKEFYAKNSRWTEGLISASKAVGWGATMLVDAADQVVQGKGKFEELMVCSHEIAASTAQLVAASKVKAEKGSSNLSRLQQASKGVTQATAGVVASTKSGKSQIEDTETMDFSAMTLTQIKRQEMDAQVLVLELETRLQKERERLGELRKKHYELAGVAEGWGGEEEGTG
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0032502 (developmental process), GO:0032501 (multicellular organismal process), GO:0044419 (biological process involved in interspecies interaction between organisms), GO:0009605 (response to external stimulus), GO:0048856 (anatomical structure development), GO:0051707 (response to other organism), GO:0007275 (multicellular organism development), GO:0009607 (response to biotic stimulus), GO:0009790 (embryo development), GO:0009620 (response to fungus), GO:0043207 (response to external biotic stimulus), GO:0009792 (embryo development ending in birth or egg hatching), GO:0001878 (response to yeast), GO:0043009 (chordate embryonic development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0012505 (endomembrane system), GO:0031410 (cytoplasmic vesicle), GO:0043229 (intracellular organelle), GO:0005768 (endosome), GO:0043227 (membrane-bounded organelle), GO:0005769 (early endosome), GO:0031982 (vesicle), GO:0043231 (intracellular membrane-bounded organelle), GO:0097708 (intracellular vesicle)
Protein: STRA6-like isoform X1 (A0A8M2B6K3)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Cell membrane; Multi-pass membrane protein. Membrane; Multi-pass membrane protein
InterPro domains:
- IPR026612: Receptor for retinol uptake STRA6-like (family) [16-604]
Sequence:
MFTERDSSDTSEIMVECQNGISVDLFLRCSLVPSVFIMFLLSLVQRRARAQPFEDRFPYLKGRFGIVVPLDFIGSLSNRWSYGFAFGAIAPSVIQLFSESYAPFYVPNWAKAIVYLIGAIEVGVAYLPFFACLSTPHRVLGGILGLLYTLMWLIVRLYDTITCPAGKILGPYEKPIILWPFYLCLFFLLGRFVYIIVKAVRIHLKLQADENEEDLHSHQFRYVQTLLRRPPESPEPKSWFRRKVYDWDPYFKFPNRMIGTSIISFIGLYMMTLADYRLSEYTFDKLDSLKDSLEQIALSCNQTESVFTYLIPSINEFSIVARRSWLATTIFSTLTSVTYTFHVLVCYRKHLKRLWRGQKSFLPEKFHTPSPAVSVAAITRYSGWQIAFTLWGFLIVHFVQFLFVLMFVYGVVLPIQKGHILSWLSNVGIILLTIFIVIALVVLQIILVQVFFLQDKLSPEDKEKPLAINNRKAFHSFNYFFFFYNVIMGLSNCVLRLVSSCIVGTWLVSRIDRTIMQRGYESMDPGYSTWIGMIFADHYHSNPVMVSFCHLLLGRTLEKGGPAACSYATFSNNTGCSVGGRVRLRWLVLYTLLRNPSLILLRKTKKLPQTDSPDPLLLARAITSQAQQADAVCNKTAETEPAPLDI
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0060090 (molecular adaptor activity), GO:0005515 (protein binding), GO:0042802 (identical protein binding), GO:0005516 (calmodulin binding)
Biological Process (BP): GO:0008150 (biological process), GO:0051179 (localization), GO:0050896 (response to stimulus), GO:0042592 (homeostatic process), GO:0032502 (developmental process), GO:0009987 (cellular process), GO:0032501 (multicellular organismal process), GO:0048869 (cellular developmental process), GO:0009628 (response to abiotic stimulus), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0051234 (establishment of localization), GO:0071840 (cellular component organization or biogenesis), GO:0033036 (macromolecule localization), GO:0045494 (photoreceptor cell maintenance), GO:0048871 (multicellular organismal-level homeostasis), GO:0007610 (behavior), GO:0010876 (lipid localization), GO:0048468 (cell development), GO:0030154 (cell differentiation), GO:0009314 (response to radiation), GO:0048731 (system development), GO:0006810 (transport), GO:0007632 (visual behavior), GO:0016043 (cellular component organization), GO:0001894 (tissue homeostasis), GO:0060249 (anatomical structure homeostasis), GO:0006869 (lipid transport), GO:0022008 (neurogenesis), GO:0009416 (response to light stimulus), GO:0007634 (optokinetic behavior), GO:0007399 (nervous system development), GO:0035845 (photoreceptor cell outer segment organization), GO:0071702 (organic substance transport), GO:0001895 (retina homeostasis), GO:0030182 (neuron differentiation), GO:0048666 (neuron development), GO:0042461 (photoreceptor cell development), GO:0015850 (organic hydroxy compound transport), GO:0046864 (isoprenoid transport), GO:0048699 (generation of neurons), GO:0046530 (photoreceptor cell differentiation), GO:0046865 (terpenoid transport)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0043226 (organelle), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0031090 (organelle membrane), GO:0043227 (membrane-bounded organelle), GO:0005886 (plasma membrane)
Protein: Iodothyronine deiodinase (A0A8M1N345)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Function: Responsible for the deiodination of T4 (3,5,3',5'- tetraiodothyronine)
Subcellular location: Endoplasmic reticulum membrane; Single-pass membrane protein. Membrane; Single-pass membrane protein
InterPro domains:
- IPR008261: Iodothyronine deiodinase, active site (active_site) [121-135]
- IPR000643: Iodothyronine deiodinase (family) [14-254]
- IPR036249: Thioredoxin-like superfamily (homologous_superfamily) [87-250]
Sequence:
MGSAVGFALRKLFVYISAVLMVCAAILRMSMLKLLSFISPGRMRKIHMKMGERTTMTQNPKFRYEDWGPAFFSLAFIKTLFFVNWCSLGLEAFEGHSAPDSALITLDRQKTSVHRFLKGNRPLVLSFGSCTUPPFLYKLDEFKQLVKDFSNVADFLIVYLAEAHATDAWAFKNNVDISVHKNLEERLAAARTLLKEDPPCPVVVDEMNNITASKYGALPERLYVIQSGKVIYQGGIGPWGYKPEEVRKVLEKSK
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0016491 (oxidoreductase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0050789 (regulation of biological process), GO:0065007 (biological regulation), GO:0050793 (regulation of developmental process)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Rootletin isoform X2 (A0A8M9QG25)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR055167: Rootletin-like, coiled-coil (domain) [133-316]
Sequence:
MSCDEDQGLEAVIQKLEESLLNPDSSAEEKTYTVRGDEEECNTTPVPARIREIITRNLADVPTGEGSELEENRLLKDLPTQMSADREQLLSRQAAITSRLEQMLLQQSGDSDQQSVYGADQGWPREEGRSYRLKLQAYQESQHRQAQLVQKLQAKLLQYKKRCGNLEQQVLEKTSESEKLRLSLQSHLDSSAHRLQRFEQEHSLDVQNKLALLDDEQKRCSGLSQVNALLREQLEQANETNQALTESLQKARDEAEQRDTRLRRELEMNTSRNSREQVRVRSLWRQVAFLRSSFTQLRAFADRSLSDLQAEYAATSHRLRVACLNLEASKSQSCTTASNGVSALETQLRDKLREAMQLQARFDAEKVELSSRILELGEMVKQLRAQNSEKESNLIALRSNLNKMVVSGEVSRDCSSKHEHSFISAGSISSSQREGPLIAVQKALLQRQTQTEDLQACLEASQEQVVTLQKQLHVEEDKTRTLEKRLQELQQENQLLERAEEDSTRDAERYRNSLGIITSEKGELERQLSAMQQQLECTQTEQEGLRSSSLDVQRQRDLLRQQREDLERQLARERSESERGRHTLEQLEARYSDVRKELVTLKEALSQLSLQKEVLEDENRSLAQALSKAEAQNAEQELALTKLRSEDAGLQDSLAKMGALSEGLAKDKVELNRLLLQAEAEKAELGERRREAELERMAAREELARLQQELLDLTAEKRALEASHNYLQEAKMTLDAEYNLLQREKSSVQEQHAQASKQKQAVQEQLNACHREMELSAALLQKTYKERDELARDKANLTVQLTSEQRKSKALAQDLAALRAERESLESSLLDRQELASSLEAIRDRLDGENASLQQANKSLTRELSSVQSELEQQMSRALQEKQALELKLAQAERNAQEMLITTQQSHQEQLHTERKHKERMHAELCAQREQAESQLRAECKELRIQSRRVLQQLQEDLAKLQQHCTESLLQAESHKQQVLSEKEAEKATLIERIITLERDMEAAALEKDRMRRDFLSKQEQDKDTASGLQAELHNLRSRFEESLSSREVSERSLNEQIRELSTQWQGAHQEAERLKRELSEVEESRDTGRKELIEAHRELRECLQDKDEQRREGLDLKRALGDAVREKEAINTSNHELRTALKRVEFENNSLKRVGEEKDQRLTVLEECKSSLQQEVLKLRTNMRELEKSRLQARRELQELRRQVKTLEGQCTQQGQELSDMQARLTQEEQREEEMRKETFTLRQKVLESEAGKEAALKEAAGLQRHIAELEEAHQQEKELQQQRDASLQDSQLKQREEVARLEGALQESQAQLREFGLSVNLAEARAQGLEEQLAQNDAKRRDLEHRLNVLNSTLRRTLGSRRGRQSPTPGERGRSPSPWRTRSPVKGEIISDETGVGGLPVCSLSPSRREDGELDLDAVQMLLHSFQQELRDTQKERDESHAQVHSLSKQVENLQANQERSNTCIQMLRQSIRELEEGKRELAKHLEGMQASLVLRDEAVQRGETQNRIMNEELAKMKKSQLIIETEAKALQDKLERSQASEESLEAERRRLKETCEAVDARAARLDLKRRGLEGELQRAQLRTTEMEAEASSLQERLNNLRRELGDSEERAALLKVECERLATALAHKELQESQLKDKLQALTASLTDSNASAGTARDQAVQLQRALSASEHNQKMVQEKLDKTREALTHSRKQNHDLSERLQSLQRSQEECELKVSELDKQTRVLQETVRQRQQAEQEAQESCLLLQEQNSQLQEQVATLQTTAHRLQGEKSDLERTLLRLGKDRSSLKRTLEKVEHNRQKKEVEILHGEREREQQEQKIRNLEEELNETQAEIHTLQSQISILEHTHSQRLLEVSARHKQELDLESERMRDSQQQTERALEAREKAHRQRVHCLEEQVSTLKEQLEQEMKRRQAYMKQMLRVNL
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0032501 (multicellular organismal process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0048731 (system development), GO:0007417 (central nervous system development), GO:0007399 (nervous system development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0043226 (organelle), GO:0042995 (cell projection), GO:0097546 (ciliary base), GO:0043227 (membrane-bounded organelle), GO:0120025 (plasma membrane bounded cell projection), GO:0005929 (cilium)