lokahq/bioreason-rl huggingface dataset:
Protein: DnaJ homolog subfamily B member 6 isoform X2 (A0A8M9QGQ3)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR018253: DnaJ domain, conserved site (conserved_site) [47-66]
- IPR036869: Chaperone J-domain superfamily (homologous_superfamily) [1-113]
- IPR043183: DnaJ homolog subfamily B member 2/6-like (family) [3-247]
- IPR001623: DnaJ domain (domain) [3-81]
Sequence:
MEEDYYHILGVTKSASPDDIKKAYRKLALKWHPDKNPNDKEEAEKRFKEISEAYEVLSDENKRRDYDRYGKQGLSNRGGHYDDEYMGGFTFRNPEDVFREFFGGHDPFADFFADDTFEGFFGGRRHRGMSRSRTAGPFFPGFSPFGPSFSGFDTGFSPFGPMGGGSFSSFSSSPFGGGGGMRNFTSISTSTKFINGKRITTKRIVENGQERVEVEEDGQLKSLTVNGFFDTRRKKLSLKESDTKKKRTPRLTPRIGVWF
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0032501 (multicellular organismal process), GO:0048856 (anatomical structure development), GO:0007610 (behavior), GO:0009888 (tissue development), GO:0061061 (muscle structure development), GO:0048513 (animal organ development), GO:0007626 (locomotory behavior), GO:0007517 (muscle organ development), GO:0060537 (muscle tissue development), GO:0007519 (skeletal muscle tissue development), GO:0060538 (skeletal muscle organ development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0031975 (envelope), GO:0012505 (endomembrane system), GO:0043229 (intracellular organelle), GO:0031967 (organelle envelope), GO:0005635 (nuclear envelope), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Zinc finger Ran-binding domain-containing protein 2 (A0A8M6Z7B1)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Function: May interfere with constitutive 5'-splice site selection
Subcellular location: Nucleus
InterPro domains:
- IPR001876: Zinc finger, RanBP2-type (domain) [9-94]
- IPR036443: Zinc finger, RanBP2-type superfamily (homologous_superfamily) [2-95]
- IPR017337: Zinc finger Ran-binding domain-containing protein 2 (family) [1-298]
Sequence:
MSGKSFRVSDGDWICPDKKCGNVNFARRTSCNRCGREKTTEAKMMKAGGTEIGKTLAEKSRGLFSANDWQCKTCGNVNWARRSECNMCNTPKYAKLEERTGYGGGFNERENLVYNEREESDGEYDEFGRIKKKFRGKTKKDSDKKEEPKKVDQDDEEEDDDDEDGDLSKYKLDDDDEDDDDDDDDEDDADLSKYDLDDGDEKKGSHSGSSRSSSRSSSSSSRSRSRSRSRSSSSSRSRSRSRSKSRSSSRSGKGSASSKKRSRSPSSSPEGGQKRSRSRSSSGGRKKRRARSHSSERFGVTHGVLDTRRPSALYTGLSDKTVHD
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0003823 (antigen binding), GO:0097367 (carbohydrate derivative binding), GO:0008289 (lipid binding), GO:0001530 (lipopolysaccharide binding)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0044419 (biological process involved in interspecies interaction between organisms), GO:0009605 (response to external stimulus), GO:0051707 (response to other organism), GO:0009607 (response to biotic stimulus), GO:0006950 (response to stress), GO:0006952 (defense response), GO:0009617 (response to bacterium), GO:0098542 (defense response to other organism), GO:0043207 (response to external biotic stimulus), GO:0042742 (defense response to bacterium)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Thymopoietin a isoform X1 (A0A8M2BC05)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
Sequence:
MSEFLEDPSVLTKDKLKSALLANNVALPNGDQRKDVYVQLYLKNLTVQNKKSSGSPDVFSSDEELPPAPVVSNRSRSGRKATRKTDKVRPDDVDVTELSNEGLKDLLLKYGLNAGPIVASTRKVYEKRLQKLLDQGPPVAVALPSETSQTDGNQNGNNDSDQYSDREEEPVAPAPVTVPEPEVEAELIPVVERPVRSRGKTPVTSRTRSGQHTREDVEEEDWPVLNVKRKLKRSSHRPDQMVPASDDTENSELSSAECFAVSEDRRRTGPGAGRRETRPLLSDRTSKLSSKSESLRRRSAPVRSVLNEASSSDKDFSEPSIVKEVSVSLMRMKVQPLTVPKDPKPSKRYSMSATESTKRPVSSLNNKHDENTADIPSPPHRQSSREPLVSLINTACVEVDDQGMQDVLSCRSANGGLLAQGVRSAAVSKLSKPVLSQSKPSKPLVDMMCCLSPSSDRQKEVEKVSAIDQTPRAVERDVLKEIFPTENLNTPTGISATCRRPIRGAAGRPLIDTWLNESRQRLSDLKQTTSSSSFSSTSSYTESRSVPRVSSIPLSASKSTAPPTVKSRSRRSLPVWVQLVLLSAVAGFLFFIYQAMETNDVGLFKQSGTDDSTSK
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0009987 (cellular process), GO:0071840 (cellular component organization or biogenesis), GO:0022402 (cell cycle process), GO:0007049 (cell cycle), GO:0016043 (cellular component organization), GO:0044085 (cellular component biogenesis), GO:1903047 (mitotic cell cycle process), GO:0000278 (mitotic cell cycle), GO:0061024 (membrane organization), GO:0044091 (membrane biogenesis), GO:0006996 (organelle organization), GO:0010256 (endomembrane system organization), GO:0140014 (mitotic nuclear division), GO:0101024 (mitotic nuclear membrane organization), GO:0022607 (cellular component assembly), GO:0006998 (nuclear envelope organization), GO:0006997 (nucleus organization), GO:0048285 (organelle fission), GO:0007084 (mitotic nuclear membrane reassembly), GO:0071709 (membrane assembly), GO:0071763 (nuclear membrane organization), GO:0031468 (nuclear membrane reassembly), GO:0000280 (nuclear division)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0016020 (membrane), GO:0012505 (endomembrane system), GO:0042175 (nuclear outer membrane-endoplasmic reticulum membrane network), GO:0043229 (intracellular organelle), GO:0043228 (non-membrane-bounded organelle), GO:0043232 (intracellular non-membrane-bounded organelle), GO:0005694 (chromosome), GO:0000793 (condensed chromosome)
Protein: Prominin-1 isoform X1 (A0A8M9QBM3)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Cell projection, microvillus membrane; Multi-pass membrane protein. Membrane; Multi-pass membrane protein
InterPro domains:
Sequence:
MDMWWKVGLVLVMFWGLTSSEDREEHRESPPRTAMLRAPVETLDFGFVPSVVYETHAYYEPGPMGILFHMVHAFLYVVQPNPFPKDLIVKMVQQNMGGIKGDDYKKPENVVLLLQTIYYELGFIVLSVLGVFFVLLMPIVGLCFCVCRCCENCGGEMHQRQKKNGDCLRGFYMATLIATSVFLAVGVTVAYVANQNITSQIKSTRRLVSTNIRDLKAFANYTPAQIDYLTAQYTTAKNKVLSDLDNIGTLLGGQIHNKLESEVVPALDHALRMTAVKVESAIKAMRETKESLESVSTSLETLQEGTGRLQVSLQSERVSLSNTLNDWACSNEDVTHTCNSIRGTLNQLALSANFNGLPDVEAPLANLDAVLKTDLSNIVQKGYSSFNDTPQLVREQTKGIVSALPKVKGLLDKSGAEIIGFTKMFPVEPALQNFSKFLTDSQKNIEAYYPQIDQLDFYRWIGCVLICCLVVLVLAFNFLGLLCGSCGYDKNSTPTTRGCLSNTGGNLLMASVGFSFIFSWVLMGVVVTTFIVGGNIEKLVCEPLANRQIFKIIDTPYMVHPTKKNFLPGMLFQDPNIDLTIGSMYRDCYENNGLYSALQLETKFNFNKFLNATVFNPEIGDIFNNVNVDLQGMLLLEQEGKDNLIDFANTGIGDIDYQAYLTEVNKGVTVVDLLSYANELDAQADNLPRGALENALKGHASSIRQIHKDQVVPMEQAMKFVKARSNLNQSIRQLEKTSRELPVKVTNVLNAIEAAEYLISNNASHVVKQESDKFIKKIIGYFSQYTEWVKHSLAMEVAQCKPISNIVDSAEIVACSFIVDSVNTFWFGLGGCCVLLIPSIIMSVKLAKFYRRMDTEDVFDDYPSYDTMRWYPRASAPPRQPDW
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0009987 (cellular process), GO:0000003 (reproduction), GO:0032501 (multicellular organismal process), GO:0022414 (reproductive process), GO:0019953 (sexual reproduction), GO:0048869 (cellular developmental process), GO:0048856 (anatomical structure development), GO:0022412 (cellular process involved in reproduction in multicellular organism), GO:0032504 (multicellular organism reproduction), GO:0003006 (developmental process involved in reproduction), GO:0048609 (multicellular organismal reproductive process), GO:0007276 (gamete generation), GO:0007281 (germ cell development), GO:0048468 (cell development), GO:0030154 (cell differentiation), GO:0007283 (spermatogenesis), GO:0048515 (spermatid differentiation), GO:0007286 (spermatid development), GO:0048232 (male gamete generation)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0045177 (apical part of cell), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0098590 (plasma membrane region), GO:0005886 (plasma membrane), GO:0016324 (apical plasma membrane)
Protein: Amphiphysin isoform X2 (A0A8M3AXC2)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR004148: BAR domain (domain) [12-240]
- IPR027267: AH/BAR domain superfamily (homologous_superfamily) [5-241]
- IPR001452: SH3 domain (domain) [1233-1305]
- IPR003017: Amphiphysin, isoform 1 (family) [3-258]
- IPR003005: Amphiphysin (family) [1-512]
- IPR036028: SH3-like domain superfamily (homologous_superfamily) [1229-1304]
Sequence:
MAEIKTGIFAKNVQKRINRAQEKVLQKLGKADETKDEQFEQCVQNFKRQEFEGSRLQREMKAYIAAVKGMQQASMNLTESLHEVYEPDWHGKDDVMTIGKNCDALWEDFHQKLVDSTINTLETYLTQFPDLKVRVAKRSRKLIDYDSARHHLETLQTSTMRNEKRIAKAEEDLKKAQRVFDDLNVGLQDELPTLWDSRVGFYVSTFKNVSSLEARFHREISFLCHKLYEVMNKLAEQHSDKMFTIQGAPSDSGPLRLARTPSPPDDESPDSSPAASPNHTLRPTSPGPPRPKSPSQLKMGPPKPPPPKVTPTRELQQEQIIDLFDGGFPEISVTSPQPNERPGESLLDLDFDPFKPDTSTPIGQTQSPVSQTLPWDLWTGDAAQPAQPATDAGFTANWAADFGSSATTVTDESANTQPAADGQGWPPADGWPTDSTPQPQGETATDEVRAWDTENYPEPNPDCDPCAVGGGEAEQQHPGQGQEGVEEGQTDWATNQVEWAEEKTGFVSEEGGAEETVGLQAMPGIIFTNEFGQEIQDPMEGAGADSSRWGLSSQVDLDGSGSEYETAEEWGDVPGQNGGWVSADDELESTENENAVVAPEQSSVAQVGFADWGRADGVGVPEQITPADSGFGGDAFAANWDQPEAAPCGSEFEKSPGELLADPAETGADMPQNIIESALSLDPFGTESNDPFGTGDDPFATSGDDPFGTGNDPFATSDQDPSGFSGSDPFATSGSELFGTEELPTENVKTGFDTDPFAESQPEGEGQWSTDPFAAGFTSDPFATEGDQDPFANEITSNPFDNESGRDPFNNENVQEWAKGFDSTGTKETGGDEKDSGVFDDNTGQGNGFAQWAAFPPPAADSESSSKGSWQEVSDSSGFFSSDGQGNFTAGWPGEAVPPQEPIASFPGPQGSSNPKSTVAEDRVIHKEPENSDLSEDEVANRRYGKLYQEIDTELEEVSNKTFNGFPKDATVPTFMADFDKMPEAEAEAPEGDVAEGEGEASPASEPEGGEGPVTTPPTDTQPEEITASSPPAETPTSTVESPVSAEPEAAEQAELPVEDIEKEQLSEESPDSVPVQETEKESPTEAALASVEDKESPIEETPTIDAKPEEETSSLEARPGDEPDNVEPKPTDEPDKVETQPGEVPDNIEPKPGDAPDNVEPQPGDETSKEGAANNGNEEEKMPIPSVVIEPASSNEGDDDRDGDITSPIATGDNGMIADCQTTKDSSGMPPRFLFKVETMHDFEAANPDELELKKGDIVLVVPTELAEDQDAGWLTGIRESDWQQRGASAKKGLFPENFTQRLE
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032501 (multicellular organismal process), GO:0003008 (system process), GO:0003012 (muscle system process), GO:0003013 (circulatory system process), GO:0003015 (heart process), GO:0008015 (blood circulation), GO:0006936 (muscle contraction), GO:0006941 (striated muscle contraction), GO:0060047 (heart contraction), GO:0060048 (cardiac muscle contraction)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005737 (cytoplasm), GO:0005622 (intracellular anatomical structure)
Protein: Calymmin isoform X3 (A0A8M6Z3G3)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
Sequence:
MLRWTILRMMLLLWMTRVTLQGGTGYQPQKSNGNAAPISPGGYGSNNNAANLKGYGVYGGAQNKPANRGHLPHGYGNGNTNGNNGYKAPSYGGYSNLLGTHPRKGAGLGFGAGPAATKGQGSNPGGSSQYMGNTNGGTKGPKPGYGAQAGQTNGQIAKPNGYGGYPNGGAANQPKTGFSQYMGYPNGGTKGPKPGYGGYPNGGAAVQPGTGSSQYKGFPSGGIKGPNPGFAANAGASNEKGVKPNGYGGYPNGGAANQPNGGSSHYMGYPNGGTKGPKPGYGANAGPSAGQVAKPNGYGGYPNAGATNQPNGGPFQNMGYPNGGTKGPKPGYGAKAGPSAGHVAKPNGNGGYPNGGATSQHNGGSSQFMGYPNGGTKGPKSGYGANAGPSAGQVAKPNGNGRYPIGGVANQPNRGSSQNMGYPNGRTKGPKQGYGANAGPSAGQVAKPNGYGGYPNGGATNQPNGGSSQYMGYPNGGAKGPKAGYGAKSGPSSGQVSKPNGSSQYMGYPNGGTNGLKPGYGAKARTTYGQGAKPQNGFGGYSNGGAINQPNTGSSQYIGYPNGGFKGPLNGQGGRPYNGYGVPGYTSKGPKAANSGYMPVITGNKGASIGKGPKGEILSAEAPSQAPLSNTKGVLPVAQQEPVTGLLPNQGTKGLPVLQQTKGQILQASLPQSKTQNSMVPQFASNPFMQGPSSYKPSKMYKPPTSTIPIEKPEIPVIPQSVPAPESAFIPQTSQTTPLEQEQVLSLEQKSQVTAQPVTQQGSISSQAAQSTPVLQQAEIQSNPALPQLKNPTTTNPELTGLEQPNGQVQGAVPAKPDCGPEGRPNGQWVKLTNPGFGYPNGKGEGLSQPGFGAGIGGYPTQGMNNGHKAGYGGYGNQLKNHAGLQGGPPARLGTKGKSQTKYGIGGLPFGGSPSGYQSNPYGQYGNDGQRYGAKPYNPKAPGKYGYGSLPYNSQAFPESVARSPDFGGFPYNGQPLGYGSGKSTGKYGQKGPQYGGQSLGHGPDAISGKYGSPESLYTPETVNLGGNAKSTKYGNPAVSYELLGPVTDGQSVEENRSIETLHQGPEIDGQKAVDNFGDGEIPPHPDVPGAGEANAQSTEKYGTEDYNAGKPQPEAVSFPAVPTVGPAVTSLDTTLSLDGSSPVPVSVPDAVHEVPVSPILPQPDLPTLMLQPAPPQQIQIQQHLKLHFQPHSNSQTGKEGKYKLSGFFGNKYQG
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005198 (structural molecule activity), GO:0005201 (extracellular matrix structural constituent)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0032501 (multicellular organismal process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0009790 (embryo development), GO:0048731 (system development), GO:0001501 (skeletal system development), GO:0009792 (embryo development ending in birth or egg hatching), GO:0043009 (chordate embryonic development), GO:0048706 (embryonic skeletal system development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0030312 (external encapsulating structure), GO:0005618 (cell wall), GO:0031160 (spore wall)
Protein: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X4 (A0A8M2BDZ5)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR038043: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D 3, SWIB domain (domain) [236-309]
- IPR036885: SWIB/MDM2 domain superfamily (homologous_superfamily) [224-314]
- IPR019835: SWIB domain (domain) [230-309]
- IPR003121: SWIB/MDM2 domain (domain) [229-306]
Sequence:
MERKRPGMPSGARMPHQGAPMGPPGPPYGGSPAVRPGLTNQSMEASRKRPNPSQQQIQQQAVQNRNRNAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNAAKPDAEDSEGSIASWELRVEGKLLDDPGKMKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTGTTQETDGFQVKRPGDVNVRCTLLLMLDYQPPQFKLDPRLARLLGIHTQTRSSIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEIPQRLTNLLLPPDPIVINHIISVDPNDQKKTACYDIDVEVEDPLKAQMSSFLLSTANQQEIASLDNKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDLKLMTDVAGNPEEERRAEFYHQPWSQEAVSRYFYCKIQQRRQELEQALALRNT
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0009987 (cellular process), GO:0032501 (multicellular organismal process), GO:0048869 (cellular developmental process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0009653 (anatomical structure morphogenesis), GO:0007389 (pattern specification process), GO:0009799 (specification of symmetry), GO:0061061 (muscle structure development), GO:0009887 (animal organ morphogenesis), GO:0009888 (tissue development), GO:0003002 (regionalization), GO:0030154 (cell differentiation), GO:0048731 (system development), GO:0048513 (animal organ development), GO:0007507 (heart development), GO:0009855 (determination of bilateral symmetry), GO:0003007 (heart morphogenesis), GO:0042692 (muscle cell differentiation), GO:0060972 (left/right pattern formation), GO:0035051 (cardiocyte differentiation), GO:0072359 (circulatory system development), GO:0060537 (muscle tissue development), GO:0007368 (determination of left/right symmetry), GO:0055007 (cardiac muscle cell differentiation), GO:0051146 (striated muscle cell differentiation), GO:0014706 (striated muscle tissue development), GO:0048738 (cardiac muscle tissue development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Runt-related transcription factor 2b isoform X1 (A0A8M9PSK4)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Nucleus
InterPro domains:
Sequence:
MASNSLFSSVTPCQQNFFWDPSAGRRFSPPVSVKMNDVNSNAGPQQQQDGAVVPRLRAQENRSMAEIIADHPAELVRTDSPNFLCSVLPSHWRCNKTLPVAFKVVALGEVPDGTVVTVMAGNDENYSAELRNASGVMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKVTVDGPREPRRHRPKLDDSPKAGLFSDRLSELERIRQTTMRVTVPTQTPRPSLSSPNSYTPQGQTQITDPRQAQSSPPWSYDQTYPSYLSPMASPSVHSTTPLSSSRATGLPSISDVPRRLPGNLQPQAYSRFDRLESFPWPV
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0065007 (biological regulation), GO:0048518 (positive regulation of biological process), GO:0050789 (regulation of biological process), GO:0032501 (multicellular organismal process), GO:0050793 (regulation of developmental process), GO:0019222 (regulation of metabolic process), GO:0050794 (regulation of cellular process), GO:0009893 (positive regulation of metabolic process), GO:0051094 (positive regulation of developmental process), GO:0048522 (positive regulation of cellular process), GO:0045597 (positive regulation of cell differentiation), GO:0010604 (positive regulation of macromolecule metabolic process), GO:0031325 (positive regulation of cellular metabolic process), GO:0009889 (regulation of biosynthetic process), GO:0051173 (positive regulation of nitrogen compound metabolic process), GO:0051171 (regulation of nitrogen compound metabolic process), GO:0060255 (regulation of macromolecule metabolic process), GO:0045595 (regulation of cell differentiation), GO:0031323 (regulation of cellular metabolic process), GO:0080090 (regulation of primary metabolic process), GO:0009891 (positive regulation of biosynthetic process), GO:0045664 (regulation of neuron differentiation), GO:0010557 (positive regulation of macromolecule biosynthetic process), GO:0045935 (positive regulation of nucleobase-containing compound metabolic process), GO:0051254 (positive regulation of RNA metabolic process), GO:0045666 (positive regulation of neuron differentiation), GO:0010556 (regulation of macromolecule biosynthetic process), GO:0031326 (regulation of cellular biosynthetic process), GO:0019219 (regulation of nucleobase-containing compound metabolic process), GO:0051252 (regulation of RNA metabolic process), GO:0031328 (positive regulation of cellular biosynthetic process), GO:0010468 (regulation of gene expression), GO:1902680 (positive regulation of RNA biosynthetic process), GO:2001141 (regulation of RNA biosynthetic process), GO:0006355 (regulation of DNA-templated transcription), GO:0045893 (positive regulation of DNA-templated transcription), GO:1903508 (positive regulation of nucleic acid-templated transcription), GO:1903506 (regulation of nucleic acid-templated transcription)
Cellular Component (CC): GO:0005575 (cellular component), GO:0032991 (protein-containing complex)
Protein: calcium/calmodulin-dependent protein kinase (A0A8M3B2B5)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR008271: Serine/threonine-protein kinase, active site (active_site) [131-143]
- IPR000719: Protein kinase domain (domain) [13-271]
- IPR013543: Calcium/calmodulin-dependent protein kinase II, association-domain (domain) [523-650]
- IPR017441: Protein kinase, ATP binding site (binding_site) [19-42]
- IPR032710: NTF2-like domain superfamily (homologous_superfamily) [521-647]
- IPR011009: Protein kinase-like domain superfamily (homologous_superfamily) [9-516]
Sequence:
MATTTCTRFTDEYQLYEELGKGAFSVVRRCVKLSTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLLFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKNAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITAQEALKHPWVCQRSTVASMMHRQETVECLKKFNARRKLKGAILTTMLVSRNFSVGSRQTTAPASVTAAAAAVAAAAGTTAGLVEQAAKTLLNKKADVKKRKSSSTIQYMESSDSSNATVEDEEMKGKVVDNSSVQSNPSAPQPDPTHTPQGPAPAVFTATKFTDLLGVVRRGSVPTSDAEGGTTTTPAVVAAPSTPQTPSIPTQMSRLTDLVSSVRRPTVPQTDSEPSAASRALSPPVSVPSHPSPSPAQVSSSPLPSAHSRKQEIIKITEQLIEAINNGDFEAYAKICDPGLTCFEPEALGNLVEGMDFHRFYFENLLSKNSKPIHTTILNPHVHLIGEEAACIAYIRLTQYVDGQGRPRSSQSEETRVWHRRDSKWQNVHFHCSGAPAAPLQ
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0016740 (transferase activity), GO:0016772 (transferase activity, transferring phosphorus-containing groups), GO:0016301 (kinase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0006950 (response to stress), GO:0009628 (response to abiotic stimulus), GO:0070482 (response to oxygen levels), GO:0001666 (response to hypoxia), GO:0036293 (response to decreased oxygen levels)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0042995 (cell projection), GO:0120025 (plasma membrane bounded cell projection), GO:0043005 (neuron projection)
Protein: ubiquitinyl hydrolase 1 (A0A8M3BD95)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR018200: Ubiquitin specific protease, conserved site (conserved_site) [169-610]
- IPR001394: Peptidase C19, ubiquitin carboxyl-terminal hydrolase (domain) [168-656]
- IPR028889: Ubiquitin specific protease UPS, catalytic domain (domain) [168-659]
- IPR009060: UBA-like superfamily (homologous_superfamily) [4-72]
- IPR003903: Ubiquitin interacting motif (conserved_site) [30-142]
- IPR054109: UBA-like domain (domain) [15-59]
- IPR054108: Ubiquitin carboxyl-terminal hydrolase 25/28, UIM (conserved_site) [81-131]
- IPR038765: Papain-like cysteine peptidase superfamily (homologous_superfamily) [163-656]
- IPR050164: Ubiquitin carboxyl-terminal hydrolases (family) [111-659]
Sequence:
MTVEQNVLQQHSQKHQQTLLNQLREVTGTTDVQLLQQALQVSNGDLVEAVAFLTEKNAKVPQQDEATYYQTAQITNDRYISVGSQADTNVIDLTGDDKDDLQRAIALSLEESNRAFRETGITDEEQAISRVLEASIAENKASLKRTHTEVWSDSPNPHERKRMENCPVGLKNVGNTCWFSAVIQSLFNLLEFQRLVLHYSPPARMQDLPRNQKEHRNLPFMQELRHLFSLLVGSKRKYVDPSGAVEILKDAFKSSESQQQDVSEFTHKLLDWLEDAFQIKAEEDREGEKPKNPMVELFYGRFLAVGVLEGKKFENTEMFGQYPLQVNGFKDLHECLEAAMIEGEIESLHSAENSAKSGQEHWFTELPPVLTFELSRFEFNQALGRPEKIHNKLEFPSMLYMDRYMDRNREITRIKREEIRRLKEHLTVLQQRLERYLSYGSGPKRFPLADVLQYAMEFASSKPVCTSPVEDIDTTAPPGGTIAQLPPPASAGEQPDACVSAEGSGSGLQASQQQQQRVSIHKPFTQSRVPPDLPMHPAPRHITEEELRVLESCLHRWRSEVENDTRDLQASISRIHRTIELMYSDKSMMQVPYRLHAVLVHEGQANAGHYWAYIYDRHHQRWMKYNDIAVTKSSWEELVRDSFGGYRNASAYCLMYIDDKKPFLIQEEFDKETGQMLSGLDKLPPDLKVFVEADNKLFEREMEEWDALQARKLQQEKLALAAAAAAAAAASVAVQPMSTEPCSPDNTAPSAAPQHDPEYMEQQSPSGDSKHLQEDTERAISKAAAEHDEKSPEALLNTAMKVEYTRLLRLAQEDTPPERDYRLQHVIVFFIHNEAPKKIVERTLLMQFADRNLGFDERCKSIMKVARAKLELIKPDEVNLEEYEMWHQDYRIFRETSVFLLIGLELFMKKSFVEALMYLIYAYQYNKELLAKGPYRGHDEELIAHYRRECLLKLNEYAAALFETGEEAKVNTGLSIMNDLVVPCLPLLLVDEMEEKDMVAVEDMRNRWCSYLGQEMEPNLQEKLTDFLPKLLDCSTEIKSFHEPPKLPSYSTLELFERFGRVMTSLTMGRTPADGR
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0032501 (multicellular organismal process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0007389 (pattern specification process), GO:1904888 (cranial skeletal system development), GO:0003002 (regionalization), GO:0009953 (dorsal/ventral pattern formation)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)