lokahq/bioreason-rl huggingface dataset:
Protein: Ferric vibriobactin receptor ViuA (A5F661)
Organism: Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 /
Function: Involved in the uptake of iron in complex with vibriobactin, a catecholate siderophore synthesized by V.cholerae. Binds and transports ferric vibriobactin across the outer membrane . The energy source is provided by the inner membrane TonB system (Probable)
Subcellular location: Cell outer membrane; Multi-pass membrane protein
InterPro domains:
- IPR036942: TonB-dependent receptor-like, beta-barrel domain superfamily (homologous_superfamily) [56-687]
- IPR010105: TonB-dependent siderophore receptor (family) [65-687]
- IPR039426: TonB-dependent receptor-like (family) [41-687]
- IPR012910: TonB-dependent receptor, plug domain (domain) [64-178]
- IPR000531: TonB-dependent receptor-like, beta-barrel (domain) [293-653]
Sequence:
MAVLCPARVSVAENKKFKLHTLSAMMMGLFTGSFAYAETQNTSNQEQEMPVLVVIGEKTQRSIYETSASVEVFDQDTIERTPGATEIDDLLQLIPNLVDSGQSNNMPTIRGIDGSGPSVGGLASFAGTSPRLNMSIDGRSLTYSEIAFGPRSLWDMQQVEIYLGPQSYIQGRNTSAGAIVMKSNDPTHHFESAVKAGIGESDYSQTAGMISAPIIQDELAFRLSFDQQKRDSFVDLAAFEPAGDPKKIEMNSVRGKLLYEPSALDGFKTTLTLSHMDSRGPQTENINVAGNEAFRPVYETASFTTAWDIIWHLNDLFTFENNLVYADFSYDRYTNPNSRGDFNTDGKEFHIEPLLRYIALDGSVNTLIGARYYQSSQDDMYIDAASAYPMDGRTKAKSVFAEVTYALTPSINVNLAGRFEREQVKRNVSHPRYKLDYDETSSVFLPKLDVAYTPVQGQTYGIKAAKGYNASGAGLAFNSMQFTGFRPYEFEQESIWNYEFYTRHRFSHSVEVLTNLFYNDFDSMQMTQTTSSGDVFIANLDEASTYGAEIGSRWYATSSLELFANLGLLKTEFKETTGNTKELPRAPKMSANVGLLYDFGQGFEFSSNAAYTGSYFSESGNSEKFAIDSYWVANAQLAYVFEHGRATLYATNLLDSDKTTLYLSTNNTLDQLKQQPRMIGASVQLNF
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005215 (transporter activity), GO:0022857 (transmembrane transporter activity), GO:0015343 (siderophore-iron transmembrane transporter activity)
Biological Process (BP): GO:0008150 (biological process), GO:0051179 (localization), GO:0051234 (establishment of localization), GO:0006810 (transport), GO:0006811 (monoatomic ion transport), GO:0006812 (monoatomic cation transport), GO:0030001 (metal ion transport), GO:0000041 (transition metal ion transport), GO:0006826 (iron ion transport), GO:1901678 (iron coordination entity transport), GO:0015891 (siderophore transport)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0032991 (protein-containing complex), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0098796 (membrane protein complex), GO:1990351 (transporter complex), GO:0098797 (plasma membrane protein complex), GO:1902495 (transmembrane transporter complex), GO:0005886 (plasma membrane), GO:0098533 (ATPase dependent transmembrane transport complex), GO:0043190 (ATP-binding cassette (ABC) transporter complex)
Protein: Snake venom metalloproteinase hemorrhagic factor 2 (P22796)
Organism: Lachesis muta muta (Bushmaster)
Function: Snake venom zinc metalloproteinase that induces weak hemorrhage and mild myonecrosis. Shows mild myotoxicity by killing myocytes. Also induces edema in the mouse footpad at doses where hemorrhage is absent. In vitro, degrades laminin, fibronectin, and type IV collagen, suggesting this toxin play a role in local tissue damage by degrading extracellular matrix, and possibly by degrading muscle extracellular matrix. Hemorrhage is not due to cytotoxicity towards endothelial cells in culture, and may only play a minor role in local bleeding characteristic of L.muta envenomations. Also induces the synthesis of several endogenous matrix metalloproteinases, which in turn, may participate in extracellular matrix degration
Subcellular location: Secreted
InterPro domains:
- IPR024079: Metallopeptidase, catalytic domain superfamily (homologous_superfamily) [1-200]
- IPR034027: Reprolysin domain, adamalysin-type (domain) [4-198]
- IPR001590: Peptidase M12B, ADAM/reprolysin (domain) [4-200]
Sequence:
FSQKYIELVVVADHGMFTKYNGNLNTIRTRVHEIVNTLNGFYRSLNILISLTDLEIWSNQDLINVQSAANDTLKTFGEWRERVLLNRISHDNAQLLTAIDLADNTIGIAYTGGMCYPKNSVGIVQDHSPKTLLIAVTMAHELGHNLGMKHDENHCHCSASFCIMPPSISEGPSYEFSDCSKDYYQMFLTKRKPQCILNKP
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0003824 (catalytic activity), GO:0016787 (hydrolase activity), GO:0043167 (ion binding), GO:0140096 (catalytic activity, acting on a protein), GO:0008233 (peptidase activity), GO:0043169 (cation binding), GO:0008237 (metallopeptidase activity), GO:0046872 (metal ion binding), GO:0000287 (magnesium ion binding), GO:0046914 (transition metal ion binding), GO:0005509 (calcium ion binding), GO:0008270 (zinc ion binding)
Biological Process (BP): GO:0008150 (biological process), GO:0065007 (biological regulation), GO:0050789 (regulation of biological process), GO:0048519 (negative regulation of biological process), GO:0048583 (regulation of response to stimulus), GO:1900047 (negative regulation of hemostasis), GO:0065008 (regulation of biological quality), GO:0051241 (negative regulation of multicellular organismal process), GO:0051239 (regulation of multicellular organismal process), GO:1900046 (regulation of hemostasis), GO:0048585 (negative regulation of response to stimulus), GO:0050818 (regulation of coagulation), GO:0030195 (negative regulation of blood coagulation), GO:0032101 (regulation of response to external stimulus), GO:0030193 (regulation of blood coagulation), GO:0050878 (regulation of body fluid levels), GO:0050819 (negative regulation of coagulation), GO:1903035 (negative regulation of response to wounding), GO:0080134 (regulation of response to stress), GO:0032102 (negative regulation of response to external stimulus), GO:0061045 (negative regulation of wound healing), GO:1903034 (regulation of response to wounding), GO:0061041 (regulation of wound healing)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005576 (extracellular region)
Protein: Ferric vulnibactin receptor VuuA (Q9L9Z9)
Organism: Vibrio vulnificus
Function: Involved in the uptake of iron in complex with vulnibactin, a catecholate siderophore synthesized by V.vulnificus. Binds and transports ferric vulnibactin across the outer membrane . The energy source is provided by the inner membrane TonB system (Probable)
Subcellular location: Cell outer membrane; Multi-pass membrane protein
InterPro domains:
- IPR010917: TonB-dependent receptor, conserved site (conserved_site) [670-687]
- IPR036942: TonB-dependent receptor-like, beta-barrel domain superfamily (homologous_superfamily) [193-687]
- IPR010105: TonB-dependent siderophore receptor (family) [66-687]
- IPR039426: TonB-dependent receptor-like (family) [37-687]
- IPR012910: TonB-dependent receptor, plug domain (domain) [64-179]
- IPR037066: TonB-dependent receptor, plug domain superfamily (homologous_superfamily) [42-190]
Sequence:
MAALRPARTSVAEKKTFKLHALSAVVMGLCASGQAYAQTESTNSNKKEEMPVVVVIGEKTERTIYDTSSSVQVFDQETIDNTPGATEIDDLLQLIPNMVDSGQGNSMPTVRGIDGSGPSIGGLASFAGTSPRLNMSIDGRSLTYSEIAFGPRSLWDMQQVEVYLGPQSYIQGRNASAGAIVMKTNDPTHHFESAVKAGVGERNYSQTAAMISAPIIQDELAFRLSFDQQKRDSFVDLASYEPAGDAKKIEMNSVRGKLLYEPSALAGFKTTLGVSHMDSRGPQSESTNVVGNEAFRPVYETKSLSTAWDISWQLNEVLTFENNLVYSKFAFDRYTNPLQKGDYTAEGKEFHVEPLLRYLSLGGRVNALVGARYYKSSQDDEYVDATSANPMSGSTKTQSAFAELTYALTQSIDVTVAGRYEKERVKRKVSDPRFKLDHDDTLSVFLPKFDIAFKPDMAQTFGFKVAKGYNSGGAGLAFNPILGGGFSPYQFEEEYIWNYEFYTRHRLGNSVELMTNTFYNDFDSMQMTQTLSNGDVLIANLDNAKTYGAEIGTRWYATDSLELFANLGLLKTEYKEVNGTSKELERAPNMTGNLGGQYSFFDGFELSANAAYTGDYFSDRSNTEIVKIDAYWVANAQLAYVFENGRAALFATNLFDSDKTTLYARGSLNEPLKQQPRMIGASLQLNF
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0009987 (cellular process), GO:0051179 (localization), GO:0050896 (response to stimulus), GO:0051234 (establishment of localization), GO:0051716 (cellular response to stimulus), GO:0042221 (response to chemical), GO:0010035 (response to inorganic substance), GO:0070887 (cellular response to chemical stimulus), GO:0006810 (transport), GO:0010038 (response to metal ion), GO:0071241 (cellular response to inorganic substance), GO:0006811 (monoatomic ion transport), GO:0071248 (cellular response to metal ion), GO:0006812 (monoatomic cation transport), GO:0010039 (response to iron ion), GO:0030001 (metal ion transport), GO:0071281 (cellular response to iron ion), GO:0000041 (transition metal ion transport), GO:0006826 (iron ion transport), GO:1901678 (iron coordination entity transport), GO:0015891 (siderophore transport)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0031975 (envelope), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0030312 (external encapsulating structure), GO:0009279 (cell outer membrane), GO:0019867 (outer membrane), GO:0030313 (cell envelope)
Protein: Ferric vulnibactin reductase VuuB (V5XKC3)
Organism: Vibrio vulnificus
Function: Ferric-siderophore reductase involved in iron removal from the siderophores after their transport into the cell (Probable). Acts as a major ferric-vulnibactin reductase catalyzing the reduction of Fe(3+)-vulnibactin, a catecholate siderophore synthesized by V.vulnificus. Catalyzes reduction of Fe(3+)-aerobactin, a citrate- hydroxamate siderophore produced by other bacteria, in the absence of IutB. Catalyzes reduction of Fe(3+)- vibriobactin in vitro. No activity with ferrioxamine B or Fe(3+)- enterobactin. Catalyzes reduction of ferric chelating compounds Fe(3+)- nitrilotriacetic acid (NTA), Fe(3+)-citrate and Fe(3+)-EDTA as well as non-complexed FeCl3 in the presence of NADH as its electron donor and FAD as its cofactor in vitro. Highest activity with Fe(3+)-NTA as electron acceptor
Subcellular location: Cytoplasm
InterPro domains:
- IPR039374: Siderophore-interacting protein (family) [1-257]
- IPR007037: SIP-like, Rossmann fold domain (domain) [134-253]
- IPR017938: Riboflavin synthase-like beta-barrel (homologous_superfamily) [14-128]
- IPR013113: Siderophore-interacting, FAD-binding (domain) [15-127]
- IPR017927: FAD-binding domain, ferredoxin reductase-type (domain) [8-131]
- IPR039261: Ferredoxin-NADP reductase (FNR), nucleotide-binding domain (homologous_superfamily) [131-270]
Sequence:
MSDSPERVYPMLLDFVRKETISKNLLRVTLTGEDLIGFPEDQNGSHIKVFFPNQASGILQLPVREGDNVIWPEHKPVPRAYSVRQYRAAVNELDIDFVTHGEETPGGGWALKADIGSQIGLIGPAGPDPLIEPADWHIIAGDLSAVPAISAILEKLPSDAKGYVFIEVDEIEDIHDLVHPEEMAINWLMRNPHDTEPALAKAIKQLPSPEKATSLSAFIAGENQSVINCRKILRNDYQIARDKLYAIPYWKRGKTEEAYHDERHDVMDAVY
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0003824 (catalytic activity), GO:0036094 (small molecule binding), GO:1901363 (heterocyclic compound binding), GO:0043167 (ion binding), GO:0097159 (organic cyclic compound binding), GO:0016491 (oxidoreductase activity), GO:0016722 (oxidoreductase activity, acting on metal ions), GO:1901265 (nucleoside phosphate binding), GO:0043168 (anion binding), GO:0000166 (nucleotide binding), GO:0050660 (flavin adenine dinucleotide binding), GO:0000293 (ferric-chelate reductase activity), GO:0071949 (FAD binding)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0019748 (secondary metabolic process), GO:0006807 (nitrogen compound metabolic process), GO:0044237 (cellular metabolic process), GO:0071704 (organic substance metabolic process), GO:0009237 (siderophore metabolic process), GO:0046483 (heterocycle metabolic process), GO:0043603 (amide metabolic process), GO:0006725 (cellular aromatic compound metabolic process), GO:1901360 (organic cyclic compound metabolic process), GO:1901564 (organonitrogen compound metabolic process)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005737 (cytoplasm), GO:0005622 (intracellular anatomical structure)
Protein: Transcriptional regulatory protein WalR (A0A0H2UQ68)
Organism: Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
Function: Member of the two-component regulatory system WalK/WalR that regulates genes involved in cell wall metabolism (By similarity). Binds to the promoter region of the transcription factor fabT gene in the fabTH-acp operon in vitro. Inhibits transcription of fabT, probably acting in an unphosphorylated form, thereby playing a role in the regulation of fatty acid biosynthesis. Essential for normal growth in vitro (By similarity). Required for maintaining normal cellular morphology, acting, at least in part, by regulating peptidoglycan hydrolase pcsB (By similarity). Involved in maintaining expression of WalRK regulon genes in exponentially growing cells (By similarity)
Subcellular location: Cytoplasm. Note=Localized to cytoplasm around nucleoids in exponentially growing cells
InterPro domains:
- IPR001867: OmpR/PhoB-type DNA-binding domain (domain) [133-232]
- IPR047791: Transcriptional regulatory protein WalR (family) [2-233]
- IPR016032: Signal transduction response regulator, C-terminal effector (homologous_superfamily) [130-231]
- IPR039420: Transcriptional regulatory protein WalR-like (family) [1-228]
- IPR011006: CheY-like superfamily (homologous_superfamily) [1-121]
- IPR058071: WalR, receiver domain (domain) [4-118]
- IPR001789: Signal transduction response regulator, receiver domain (domain) [2-116]
- IPR036388: Winged helix-like DNA-binding domain superfamily (homologous_superfamily) [124-233]
Sequence:
MKKILIVDDEKPISDIIKFNMTKEGYEVVTAFNGREALEQFEAEQPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKDSEFDKVIGLELGADDYVTKPFSNRELQARVKALLRRSQPMPVDGQEADSKPQPIQIGDLEIVPDAYVAKKYGEELDLTHREFELLYHLASHTGQVITREHLLETVWGYDYFGDVRTVDVTVRRLREKIEDTPSRPEYILTRRGVGYYMRNNA
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0065007 (biological regulation), GO:0050789 (regulation of biological process), GO:0019222 (regulation of metabolic process), GO:0050794 (regulation of cellular process), GO:0060255 (regulation of macromolecule metabolic process), GO:0031323 (regulation of cellular metabolic process), GO:0080090 (regulation of primary metabolic process), GO:0009889 (regulation of biosynthetic process), GO:0051171 (regulation of nitrogen compound metabolic process), GO:0019219 (regulation of nucleobase-containing compound metabolic process), GO:0051252 (regulation of RNA metabolic process), GO:0010556 (regulation of macromolecule biosynthetic process), GO:0010468 (regulation of gene expression), GO:0031326 (regulation of cellular biosynthetic process), GO:2001141 (regulation of RNA biosynthetic process), GO:0006355 (regulation of DNA-templated transcription), GO:1903506 (regulation of nucleic acid-templated transcription)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0042763 (intracellular immature spore)
Protein: Waprin-Thr1 (A0A7M7H308)
Organism: Apis mellifera (Honeybee)
Function: Antimicrobial peptides with activity against Gram-positive and Gram-negative bacteria as well as fungi. Recognizes carbohydrates in the microbial cell walls, and induces structural damage to them. Also inhibits microbial serine proteases subtilisin A and proteinase K, as well as human and porcine elastases. Carbohydrates that are recognized are LPS, mannan, peptidoglycan, and N-acetl-D-glucosamine
Subcellular location: Secreted
InterPro domains:
- IPR036645: Elafin-like superfamily (homologous_superfamily) [18-68]
- IPR008197: WAP-type 'four-disulfide core' domain (domain) [22-68]
Sequence:
MYKKGTILVLAYLLIATAVCQLSYKEGHCPLRNSVSKCIPRCVSDYQCSFNEKCCPNKCGSESCVQASPINTGNGYKGSNDDVYCAGVKCGPYEKCQFDRKTKREKCVRT
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0098772 (molecular function regulator activity), GO:0030234 (enzyme regulator activity), GO:0140678 (molecular function inhibitor activity), GO:0061134 (peptidase regulator activity), GO:0004857 (enzyme inhibitor activity), GO:0061135 (endopeptidase regulator activity), GO:0030414 (peptidase inhibitor activity), GO:0004866 (endopeptidase inhibitor activity), GO:0004867 (serine-type endopeptidase inhibitor activity)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0044419 (biological process involved in interspecies interaction between organisms), GO:0009605 (response to external stimulus), GO:0051707 (response to other organism), GO:0009607 (response to biotic stimulus), GO:0006950 (response to stress), GO:0006952 (defense response), GO:0009617 (response to bacterium), GO:0098542 (defense response to other organism), GO:0043207 (response to external biotic stimulus), GO:0042742 (defense response to bacterium), GO:0050829 (defense response to Gram-negative bacterium)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005576 (extracellular region)
Protein: TNF receptor-associated factor family protein DDB_G0290971 (Q54FB9)
Organism: Dictyostelium discoideum (Social amoeba)
Function: Probable adapter protein and signal transducer that links members of the tumor necrosis factor receptor family to different signaling pathways by association with the receptor cytoplasmic domain and kinases
Subcellular location: Cytoplasm
InterPro domains:
- IPR001293: Zinc finger, TRAF-type (domain) [186-241]
- IPR008974: TRAF-like (homologous_superfamily) [318-444]
- IPR013083: Zinc finger, RING/FYVE/PHD-type (homologous_superfamily) [2-226]
- IPR002083: MATH/TRAF domain (domain) [314-442]
Sequence:
MTVKYSINELLVDHESLSDNFTCPICFDLYYSSSSKKEVFQCRDGHLACKSCWSDSLLNKKECMICRTPVNSMNELSRNRFIENEFLKKKVYCPNSFFFIENVNVDDSSMNEALIRDESNGCKEIITVEALEKHQVECQFRFEKCPFTGCDKILRLKQIAEHKIDCKFSSKYCLHCDKEIPGQLDAHALVCPKVRIQCTQSESCKKSFPREQLRLHIDQDCKFTIVKCKYCCLNNSKNESIDFKRFELADHYEKVNHSFEMDKVINNQQLELVECKNQIYQINNKYEKLLERVIKLEQLSMDASNKLSLLPRFKNSIIFATFSTHKLKRVNEGISTVPLDVGNNKFKLTLYPNGYDESNKGNISAYLYRVSINEPAVKVSFTFVFNNQDSRKNRTYRIQEYTFNGGATSGWGYPKTLKTVDVDSANGWLTDEDKLVIGLRIQVLP
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0016740 (transferase activity), GO:0140096 (catalytic activity, acting on a protein), GO:0019787 (ubiquitin-like protein transferase activity), GO:0004842 (ubiquitin-protein transferase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0065007 (biological regulation), GO:0048518 (positive regulation of biological process), GO:0050896 (response to stimulus), GO:0050789 (regulation of biological process), GO:0032502 (developmental process), GO:0009987 (cellular process), GO:0023052 (signaling), GO:0051703 (biological process involved in intraspecies interaction between organisms), GO:0009605 (response to external stimulus), GO:0048856 (anatomical structure development), GO:0050794 (regulation of cellular process), GO:0051716 (cellular response to stimulus), GO:0099120 (socially cooperative development), GO:0006950 (response to stress), GO:0007154 (cell communication), GO:0007165 (signal transduction), GO:0048522 (positive regulation of cellular process), GO:0009991 (response to extracellular stimulus), GO:0042594 (response to starvation), GO:0031152 (aggregation involved in sorocarp development), GO:0033554 (cellular response to stress), GO:0007186 (G protein-coupled receptor signaling pathway), GO:0031668 (cellular response to extracellular stimulus), GO:0071496 (cellular response to external stimulus), GO:0030587 (sorocarp development), GO:0009267 (cellular response to starvation), GO:0031667 (response to nutrient levels), GO:0031669 (cellular response to nutrient levels)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005829 (cytosol), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Uncharacterized RNA-binding protein C106.12c (Q9URV0)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
InterPro domains:
- IPR012677: Nucleotide-binding alpha-beta plait domain superfamily (homologous_superfamily) [57-210]
- IPR000504: RNA recognition motif domain (domain) [85-161]
- IPR051229: ALYREF mRNA export adapter (family) [3-224]
- IPR025715: Chromatin target of PRMT1 protein, C-terminal (domain) [179-225]
- IPR035979: RNA-binding domain superfamily (homologous_superfamily) [77-165]
Sequence:
MSLEKSLDEIINERTNGFDHKHSRRRGSQNRISKKSRLTYKFKRASKEHNSSPDDGPWQHDLDQEQDAHPRTTHLQKRQHSENRFGVRVENLHYQVLEKDVLSLFENFHPIRVIMNYDRAGRSEGSCDVYFETSQDAEDAQKTLQSTNLKGSEIQISKKSPPSLFDRISDMPHSARKPSRSSRSNRGFNRSSKKDDRSFRSSSKKSSNNSISHEDLDKELDEYAMSFHAASTVSSHSSQDFTPSIANAHEKNEPVAPSKDSNLTEEMDLQMEAV
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0051179 (localization), GO:0051234 (establishment of localization), GO:0051641 (cellular localization), GO:0071704 (organic substance metabolic process), GO:0033036 (macromolecule localization), GO:0051649 (establishment of localization in cell), GO:0051236 (establishment of RNA localization), GO:0046907 (intracellular transport), GO:0006810 (transport), GO:0006403 (RNA localization), GO:0043170 (macromolecule metabolic process), GO:0071702 (organic substance transport), GO:0050658 (RNA transport), GO:0051169 (nuclear transport), GO:0071705 (nitrogen compound transport), GO:0010467 (gene expression), GO:0015931 (nucleobase-containing compound transport), GO:0006913 (nucleocytoplasmic transport), GO:0051028 (mRNA transport), GO:0006406 (mRNA export from nucleus), GO:0006405 (RNA export from nucleus), GO:0016973 (poly(A)+ mRNA export from nucleus), GO:0051168 (nuclear export), GO:0050657 (nucleic acid transport)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0031974 (membrane-enclosed lumen), GO:0043233 (organelle lumen), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043228 (non-membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0070013 (intracellular organelle lumen), GO:0043232 (intracellular non-membrane-bounded organelle), GO:0031981 (nuclear lumen), GO:0005730 (nucleolus), GO:0005634 (nucleus)
Protein: Putative cell agglutination protein SPAC1348.08c (P0CU04)
Organism: Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Function: May be involved in agglutination during conjugation or other aspects of colony formation
Subcellular location: Cell surface
InterPro domains:
- IPR051905: Schizosaccharomyces pombe Mam3/Map4 (family) [84-396]
- IPR018871: GLEYA adhesin domain (domain) [280-376]
- IPR037524: PA14/GLEYA domain (domain) [224-390]
Sequence:
MNFFLYFRTIFLIQLYFFNYSTFGCSASSTSVQSDTTNQVSVSCPKYTTIYTSGTSPDTKTIYPESTSTKSITTSTQSHSSPVIVVSTVGTVTETTISGSTEYTTTIPAEGITSGTVEIVEPTAGTVTETITSGTLPFTTTLAQASGTVSGTVEIVSPKNNPTTVYSGTVATTETFSSSTVVVIPTAICDGVRGLEYAVYDYTISSSMNEFCYPKNGQTDVFAFNEPAYFGSSDLDQSSPLFTGVFSSTDDIPEWASSWYLPPYPPQASDMASTYCACKVIVYQFFLRIPETDTYTLVVNNVDDVFFGWFGDKAISGWSNNNFDAYSYWHESPNMGLGTVGMGNFTVGNYPEGYFLPVRFVVANGAYIGGFDFYFTSDSTGPLATTSYSYTKTCTQQFLPFGQGNGGVNGPTEKLS
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0036094 (small molecule binding), GO:0030246 (carbohydrate binding), GO:0048029 (monosaccharide binding), GO:0005537 (mannose binding)
Biological Process (BP): GO:0008150 (biological process), GO:0051703 (biological process involved in intraspecies interaction between organisms), GO:0009987 (cellular process), GO:0007155 (cell adhesion), GO:0098609 (cell-cell adhesion)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0030312 (external encapsulating structure), GO:0009986 (cell surface), GO:0005618 (cell wall)