lokahq/bioreason-rl huggingface dataset:
Protein: Basic helix-loop-helix ARNT-like protein 1 (A0A8M9PNL9)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Cytoplasm. Nucleus, PML body
InterPro domains:
- IPR036638: Helix-loop-helix DNA-binding domain superfamily (homologous_superfamily) [115-185]
- IPR001067: Nuclear translocator (family) [138-407]
- IPR001610: PAC motif (repeat) [452-495]
- IPR050933: Circadian Clock Transcription Factors (family) [37-668]
- IPR011598: Myc-type, basic helix-loop-helix (bHLH) domain (domain) [123-182]
- IPR000014: PAS domain (domain) [194-487]
- IPR013767: PAS fold (domain) [200-303]
- IPR035965: PAS domain superfamily (homologous_superfamily) [207-493]
Sequence:
MYSDTGHRRPYSPGYTCASLPSSYDLMADQRMDISSTMNEFMSPSSTELISSSMGSTGMDFNRKRKGSITDYEIDGFSFESDSSWMRFLIPSSQLTQSPESDRDSMDTDKDKPLGRADQQMKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKLTVLRMAVQHMKTLRGAANPYTEANYKPAFLSDDELKHLILKAADGFLFVVGCDRGKILFVSESVYKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVRTDIAPSPSRLCSGARRSFFCRMKCNRSMVKMEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHPHIVPQPVNGDIRVKPTEYVSRHAIDGKFVFVDQRATAILAYLPQELLGTSFYEYFHQDDIGHLAECHRQVLQMREKINTHCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVSGSSVDGAEPGFPQLSASPQSMDSVLTAADGSGKTVPGLPGGTRAGAGKIGRMIAEEVMEIHRIRGSSPSSCGSSPLNISNSTPPPDTSSPAARKMSNGGTPDIPSAGLGSGQDSIGYPYSNSSILSDNSHIGIGDIMDEPGSSSPSSDEAAMAIIMSLLEADAGLGGPVDFSDLPWPL
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0003682 (chromatin binding), GO:0097159 (organic cyclic compound binding), GO:1901363 (heterocyclic compound binding), GO:0005515 (protein binding), GO:0003676 (nucleic acid binding), GO:0003677 (DNA binding)
Biological Process (BP): GO:0008150 (biological process), GO:0065007 (biological regulation), GO:0048518 (positive regulation of biological process), GO:0050896 (response to stimulus), GO:0050789 (regulation of biological process), GO:0009893 (positive regulation of metabolic process), GO:0009628 (response to abiotic stimulus), GO:0019222 (regulation of metabolic process), GO:0060255 (regulation of macromolecule metabolic process), GO:0010604 (positive regulation of macromolecule metabolic process), GO:0009314 (response to radiation), GO:0009416 (response to light stimulus), GO:0010628 (positive regulation of gene expression), GO:0010468 (regulation of gene expression), GO:0009648 (photoperiodism)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0032991 (protein-containing complex), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005667 (transcription regulator complex), GO:0000785 (chromatin), GO:0043229 (intracellular organelle), GO:0043228 (non-membrane-bounded organelle), GO:0043232 (intracellular non-membrane-bounded organelle), GO:0005694 (chromosome)
Protein: CD2-associated protein isoform X1 (A0A8M3AKU9)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR001452: SH3 domain (domain) [1-344]
- IPR035776: CD2-associated protein, second SH3 domain (domain) [126-180]
- IPR035777: CD2-associated protein, third SH3 domain (domain) [285-341]
- IPR050384: Endophilin/SH3RF (family) [87-340]
- IPR036028: SH3-like domain superfamily (homologous_superfamily) [3-350]
Sequence:
MVEVVVEYEYEALHEDELTLRLGDIIKNVRRIEEEGWMEGDLNGKRGLFPDNFVKEVRKDEPKSKEESKEPKEAKEVKEESTIQRRASGNVASLVQRISTYGIPAGGIGLQPHSQPRASKKKLKKRQCKVLFEYVPQNEDELELKVGEIIEITEEVEEGWWSGSMNGKSGLFPSNFVKEIDSTEDAENSDVTEEQDTRDGTSSPTSPHPGNGVMAQPKKIKGIGFGDIFREGSVKLRTSLKGPSENMEKTEKPIPPLPSATKPTPLSTPEHPKGEKEAESKAKVKEYCKATFHYEATNQDELDLKEGEVILILSKDTGEPGWWRGEVNGKQGVFPDNFVSLLPESDKETLTSKGSIKVLSKQEPEERPKKPPPPSKSTVLKPETPSVDKKQPQPRPEDKVVKPLPEKPAKPAGPIVPPKKPVPPSKSLLRPSYHTKRPDLPLTPSPAAKQNGDVPLSRRKSECEPVPIKPKTVVDIGEKSTETVNLMSFDDVSSSSEKLSHPTAQRPKMPGKRPPAHRGHSPSKDVGEKAEKTEKIDEVETAPSPAPAPAPAPSTQNSIKMPISSPLPSTTPKTISATLITPEPKPKPDKEQEKTSELEELKDQIKDLVLSVELLKTQQSRELGELRKELDDERLKRVALQMEIDKLKKICVQST
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0032501 (multicellular organismal process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0003008 (system process), GO:0003014 (renal system process), GO:0072006 (nephron development), GO:0032835 (glomerulus development), GO:0048731 (system development), GO:0048513 (animal organ development), GO:0072001 (renal system development), GO:0039021 (pronephric glomerulus development), GO:0039019 (pronephric nephron development), GO:0001822 (kidney development), GO:0097205 (renal filtration), GO:0048793 (pronephros development), GO:0003094 (glomerular filtration)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Prominin-1 isoform X6 (A0A8M9QH22)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Cell projection, microvillus membrane; Multi-pass membrane protein. Membrane; Multi-pass membrane protein
InterPro domains:
Sequence:
MDMWWKVGLVLVMFWGLTSSEDREEHRESPPRTAMLRAPVETLDFGFVPSVVYETHAYYEPGPMGILFHMVHAFLYVVQPNPFPKDLIVKMVQQNMGGIKGDDYKKPENVVLLLQTIYYELGFIVLSVLGVFFVLLMPIVGLCFCVCRCCENCGGEMHQRQKKNGDCLRGFYMATLIATSVFLAVGVTVAYVANQNITSQIKSTRRLVSTNIRDLKAFANYTPAQIDYLTAQYTTAKNKVLSDLDNIGTLLGGQIHNKLESEVVPALDHALRMTAAMRETKESLESVSTSLETLQEGTGRLQVSLQSERVSLSNTLNDWACSNEDVTHTCNSIRGTLNQLALSANFNGLPDVEAPLANLDAVLKTDLSNIVQKGYSSFNDTPQLVREQTKGIVSEVKGLLDKSGAEIIGFTKMFPVEPALQNFSKFLTDSQKNIEAYYPQIDQLDFYRWIGCVLICCLVVLVLAFNFLGLLCGSCGYDKNSTPTTRGCLSNTGGNLLMASVGFSFIFSWVLMGVVVTTFIVGGNIEKLVCEPLANRQIFKIIDTPYMVHPTKKNFLPGMLFQDPNIDLTIGSMYRDCYENNGLYSALQLETKFNFNKFLNATVFNPEIGDIFNNVNVDLQGMLLLEQEGKDNLIDFANTGIGDIDYQAYLTEVNKGVTVVDLLSYANELDAQADNLPRGALENALKGHASSIRQIHKDQVVPMEQAMKFVKARSNLNQSIRQLEKTSRELPVKVTNVLNAIEAAEYLISNNASHVVKQESDKFIKKIIGYFSQYTEWVKHSLAMEVAQCKPISNIVDSAEIVACSFIVDSVNTFWFGLGGCCVLLIPSIIMSVKLAKFYRRMDTEDVFDDYPSYDTMRWYPRASAPPRQPDW
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0009987 (cellular process), GO:0032501 (multicellular organismal process), GO:0048869 (cellular developmental process), GO:0048856 (anatomical structure development), GO:0071840 (cellular component organization or biogenesis), GO:0007275 (multicellular organism development), GO:0016043 (cellular component organization), GO:0048468 (cell development), GO:0030154 (cell differentiation), GO:0048731 (system development), GO:0022008 (neurogenesis), GO:0035845 (photoreceptor cell outer segment organization), GO:0007399 (nervous system development), GO:0030182 (neuron differentiation), GO:0048666 (neuron development), GO:0042461 (photoreceptor cell development), GO:0046530 (photoreceptor cell differentiation), GO:0048699 (generation of neurons)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0045177 (apical part of cell), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0098590 (plasma membrane region), GO:0005886 (plasma membrane), GO:0016324 (apical plasma membrane)
Protein: RAS guanyl-releasing protein 1 isoform X4 (A0A8M2BKY0)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR036964: Ras guanine-nucleotide exchange factor, catalytic domain superfamily (homologous_superfamily) [186-455]
- IPR002219: Protein kinase C-like, phorbol ester/diacylglycerol-binding domain (domain) [536-586]
- IPR008937: Ras-like guanine nucleotide exchange factor (family) [51-434]
- IPR001895: Ras guanine-nucleotide exchange factors catalytic domain (domain) [194-430]
- IPR018247: EF-Hand 1, calcium-binding site (binding_site) [476-488]
- IPR011992: EF-hand domain pair (homologous_superfamily) [453-524]
- IPR000651: Ras-like guanine nucleotide exchange factor, N-terminal (domain) [49-174]
- IPR002048: EF-hand domain (domain) [463-498]
- IPR023578: Ras guanine nucleotide exchange factor domain superfamily (homologous_superfamily) [53-455]
- IPR020454: Diacylglycerol/phorbol-ester binding (domain) [534-587]
- IPR046349: C1-like domain superfamily (homologous_superfamily) [524-586]
Sequence:
MGFDTMNRKESKSSRKSRQEGGIKSRRPVQRRMTCPSAQEISRALQSPPAHASFRSASLDELILRCLHCFDSDGKLNRGTQLVSMTLMMHNWVVPSHIFAHKLLSLYKDCPAEKRGQRRPQICHFIRQWISQFRLMFEMDPLLEKAMGDLWALVSAEGTNSHHQLINTPYINPPVNISQTPSPLVKKRKVSLLFDHMEPDEMAEHLSYLEFKNFCNVSFLDYRSYVVHGSVRDNPALERSVMLCNGVSQWVQLMILNRHTSQQRAEVFTKFIHVAQKLRSLQNFNTLMAVIGGLCHSSISRLKDTASLLSSDVTKTLSELTELLSSYSNYSNYRRVYSECTGFKVPILGVHLKDLISLNEALPDYLEDDKINLGKLQHLYSNISDLLAIHDCTPPFEANKDLLHLLTLSLDLYYTEDEIYELSYAKEPKNPKIQPVAPVKPPVVAEWGSGVTPRLDPATISKHVKQMVDSIMKNYDLNMDGYISLEEFEKIAANFPFSFCTHESDREGEISREEITSYFMRGMSVCAKLGFNLHNLHNFHETTYKRPTFCDTCGGFLWGVIKQGYHCKDCGVNCHKHCKDVVGMECLKRLQVNSSSCPCTPGPVSGLHTKGNSWSEFSQSFQSGSEEEAFVFPNGNESEHSKGQTSSDSDAEAATLSDRSTQTEPGVWTPVAKRKDRLHSQKQHPPLEKIVHDVH
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0098772 (molecular function regulator activity), GO:0030234 (enzyme regulator activity), GO:0140677 (molecular function activator activity), GO:0140678 (molecular function inhibitor activity), GO:0060589 (nucleoside-triphosphatase regulator activity), GO:0005085 (guanyl-nucleotide exchange factor activity), GO:0030695 (GTPase regulator activity)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0032501 (multicellular organismal process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0001945 (lymph vessel development), GO:0048731 (system development), GO:0001944 (vasculature development), GO:0072359 (circulatory system development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0005886 (plasma membrane)
Protein: Zinc finger protein 513a isoform X2 (A0A8M9PBW4)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
Sequence:
MDLVGPYCMRCCKGNVEGIVDRKLCSGLGLQAESRGGGNEGTGEDGSLKLHSCTLCGFTSRYTNHVKRHMKTHNGEKPYGCPLCSYASAQLVNLQRHLRIHTGEKPYKCNTCTFACSSLGNLKRHQRMHATIGPGQSVTQPVSGNGLNHSTAAQKEKEAVPAPTEVAGAVRSVTRPHMGRDGNYLQTFDGLRLAQQTSTGVLQSGQAASQPAALPPMFFPFTCRLCGMALDDEDGSSAQICAKCTLEMLTKDTHGCPAERGDKVYTCAACPFLTHYPNHLARHMKTHSGEKPYKCPQCDYASAHFDNLKRHHRVHTGEKPYKCHLCDYACGNLANLKRHQRVHSGAKPFQCAICNYSCNQSMNLKRHMLRHTGEKPHKCQECGYTTGHWDNYKRHQKKHSLAGDGWVKVPLPGNEEEVEDDEEV
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0097159 (organic cyclic compound binding), GO:1901363 (heterocyclic compound binding), GO:0003676 (nucleic acid binding), GO:0003677 (DNA binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0032501 (multicellular organismal process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0060041 (retina development in camera-type eye), GO:0048731 (system development), GO:0048513 (animal organ development), GO:0048880 (sensory system development), GO:0007423 (sensory organ development), GO:0001654 (eye development), GO:0150063 (visual system development), GO:0043010 (camera-type eye development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Neuronal pentraxin 2a isoform X1 (A0A8M2BBR8)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR030476: Pentaxin, conserved site (conserved_site) [314-321]
- IPR013320: Concanavalin A-like lectin/glucanase domain superfamily (homologous_superfamily) [245-420]
- IPR001759: Pentraxin domain (domain) [222-427]
- IPR051360: Neuronal Pentraxin and Related (family) [76-428]
Sequence:
MRALFVALLLVYASGSGKVAGANGAKGNRFVCTAVPAGTDLSCPVETTNRVQSTSPQEEELRNTIIQLRETILQQKETIVSQQGTIKELNSKLARCEADVRSRGSARRKDYSKNTMGDLPRDPTESVEQLGKTMQSLKDRLESLEQQLRTNTSNGAFPSELRDLLKRRLSDLEGQLLTRVAELEEEKSQLYNETAAHRQRTENTLNSLLERITELEKSNSAFKSPEDFKVALPLRTNYLYGRIKKSLPEMYAFTVCMWLKSSASPGIGTPFSYGVPGQANEIVLIEWGNSPMELLVNDKVAQLPLSVSDGRWHHICITWTTRDGFWEAYQDGERLGTGENLAPWHPIKPGGVIILGQEQDIVGGRFDATQAFVGELSHFNMWDRVLRPIDISAMANCSAYMPGNVVPWVDANVEVFGGATKAALEICEERLFDS
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0050789 (regulation of biological process), GO:0065007 (biological regulation), GO:0023051 (regulation of signaling), GO:0050794 (regulation of cellular process), GO:0010646 (regulation of cell communication), GO:0099177 (regulation of trans-synaptic signaling), GO:0050804 (modulation of chemical synaptic transmission), GO:0051966 (regulation of synaptic transmission, glutamatergic)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0030054 (cell junction), GO:0045202 (synapse), GO:0098978 (glutamatergic synapse)
Protein: Sodium-dependent phosphate transport protein 2B (A0A8M9P515)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Function: Involved in actively transporting phosphate into cells via Na(+) cotransport
Subcellular location: Apical cell membrane; Multi-pass membrane protein. Cell membrane; Multi-pass membrane protein. Membrane; Multi-pass membrane protein
InterPro domains:
- IPR003841: Sodium-dependent phosphate transport protein (family) [43-636]
Sequence:
MAPLAETHPASPPPELGADADKHEPQTPTRTLSPWPAQQWEPEQEEEVDPWELPELLDTGVKWSELDRRGKVLRVCTSVLKLLLLLGLLYMFVCSLDILSSAFQLVGGKAAGDIFKDNAVLSNPVAGLVIGVLVTVLVQSSSTSSSIVVSMVSSGLLEVKSAVPIIMGANIGTSVTNTIVAVMQAGDRNEFRRAFAGATVHDFFNWLSVLVLLPLEVASGMLYRLTKLVIDSFNIQTGADAPDLLKVITEPLTKNIIELDTSVIRDIATGDPAARNKSLIKIWCKTEKITNLVNVTVPGIANCTPDALCWVDGDLIWTQKNQTDTIYLKKCTHMFVFADLPDLAVGLILLALSLLALCTCLILIVKLLNSMLKGQVAVVIKKVLNTDFPFPFAWVTGYLAILVGAGMTFIVQSSSVFTSAITPLVGIGVISLERAYPLTLGSNIGTTTTAILAAMASPGETLANSLQISLCHFFFNIAGILLWYPIPFTRVPIRLAKALGNRTAKYRWFAGLYLILCFLLFPLTVLGLSIAGWQVLVGVGVPVLVLAIFVIVVNVMQKRCPRFLPSFIRSWEFLPKPLHSLKPWDRVVTAGMSFCRTRCCCCCKCCRNEEKNHVENNDRSLEMYDNPALAIEDEAKVTATHL
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005215 (transporter activity), GO:0022857 (transmembrane transporter activity), GO:1901702 (salt transmembrane transporter activity), GO:0015075 (monoatomic ion transmembrane transporter activity), GO:0015318 (inorganic molecular entity transmembrane transporter activity), GO:0022804 (active transmembrane transporter activity), GO:0022890 (inorganic cation transmembrane transporter activity), GO:0005315 (inorganic phosphate transmembrane transporter activity), GO:0022853 (active monoatomic ion transmembrane transporter activity), GO:0008324 (monoatomic cation transmembrane transporter activity), GO:0015081 (sodium ion transmembrane transporter activity), GO:0015291 (secondary active transmembrane transporter activity), GO:0015293 (symporter activity), GO:0015294 (solute:monoatomic cation symporter activity), GO:0046873 (metal ion transmembrane transporter activity), GO:0015370 (solute:sodium symporter activity), GO:0005436 (sodium:phosphate symporter activity)
Biological Process (BP): GO:0008150 (biological process), GO:0051179 (localization), GO:0051234 (establishment of localization), GO:0006810 (transport), GO:0015698 (inorganic anion transport), GO:0006817 (phosphate ion transport)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0045177 (apical part of cell), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0098590 (plasma membrane region), GO:0005886 (plasma membrane), GO:0016324 (apical plasma membrane)
Protein: Tumor necrosis factor receptor superfamily member 6 (A0A8N7UR03)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Membrane raft
InterPro domains:
- IPR011029: Death-like domain superfamily (homologous_superfamily) [198-294]
- IPR008063: Fas receptor (family) [43-212]
- IPR033998: Fas receptor, death domain (domain) [201-293]
- IPR001368: TNFR/NGFR cysteine-rich region (domain) [29-145]
- IPR000488: Death domain (domain) [197-288]
- IPR034055: Tumor necrosis factor receptor 6, N-terminal, teleost (domain) [28-129]
Sequence:
MFVCKFGVFIVFVMPTLTYSWRLRRDASCEFGTYQHERNTCCLCPAGFKVSTHCTNTDKTECKQCEDGYYLNNNNNENQCRPCKICDANAKMKEIEKCSKSSNTVCGCEEGRFCDKDKDCNVCYPCDPCPNGVKEQCTETHNTVCHDAKDLTGTIAAAVVVSFILIAVAAFMIFIWKKKKFCFQVRQSTDKVQTEEALPLIDLSPHLPKIADVLCWKTVKEVARRSGMTAKDIEEQELNHPKDAREQTFGLLEAWSQRQGLDKAYRALITTLQDIGEKATADKIQNIVKASSQP
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding), GO:0042802 (identical protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0065007 (biological regulation), GO:0048518 (positive regulation of biological process), GO:0050789 (regulation of biological process), GO:0032501 (multicellular organismal process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0050794 (regulation of cellular process), GO:0048522 (positive regulation of cellular process), GO:0009790 (embryo development), GO:0010942 (positive regulation of cell death), GO:0010941 (regulation of cell death), GO:0048513 (animal organ development), GO:0048568 (embryonic organ development), GO:0043067 (regulation of programmed cell death), GO:0043068 (positive regulation of programmed cell death), GO:0043065 (positive regulation of apoptotic process), GO:0042981 (regulation of apoptotic process), GO:0030903 (notochord development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0005886 (plasma membrane)
Protein: Microtubule-associated protein 9 isoform X1 (A0A8M3B099)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR026106: Microtubule-associated protein 9 (family) [356-679]
Sequence:
MDDEPVSTTLAYTKSPKTPRRTTFQDELKKAVSARASRHSYSDDFENDDDEDCKVKSDDDDDDILNTLIKTQKQKKERFKAGKTKGKINDFKLSDDEEENVKPKKVSFMKTKRTSSPLHFEQSNSAGSADGQCSSVHSSQPRNSSQSPSNSYTPEKNQQSDSPFSSLSDKYLPESTLLKNDEQSKSAVRLRNQTESSMVRKSLSESPLPLNSENSQWDSSIPFTSEGSQWDSPVPLPSEKHEDNQKIEKDDEVPVPQPRERTVKSKSSAGCLLQDVSPRPKPRQKTSNLCDTGQLEEETKPETPDCSRAATSSMSIAFSNRSSSEKSQASTNECTSVQGPDGDQAMTERSFLSSEQLSENLATAGSAATEESKERNYSTSFEEKPESSQGDLEQASTTPNQISRKTTDRPSSSQSTSSRKSKCSYKAESKYLGTLKILDQRTQKAQQVPEAADSLRAAVYQEWLKKKEETLEITRRAKKQEQKMKEEKMQEEKLSKTADAKASYDAWKEKKRDVIRKKLSEKQKLINQQQVEMDKKQEKKETAKQQVFEKWKEEHDSILKDKIREKKQAERKLKLQKVTEKEERKKDCSSAFTKWSDQKKDVIEEKVREERRKQKIKEVEEQYEKEEKDKMALEMYDKWLRRKEFQQEKEKKEKRIQAILQEEPPPPWSPPNKTIPFGK
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding), GO:0008092 (cytoskeletal protein binding), GO:0015631 (tubulin binding), GO:0008017 (microtubule binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0009987 (cellular process), GO:0032501 (multicellular organismal process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0009653 (anatomical structure morphogenesis), GO:0007049 (cell cycle), GO:0009790 (embryo development), GO:0048729 (tissue morphogenesis), GO:0048598 (embryonic morphogenesis), GO:0009888 (tissue development), GO:0000278 (mitotic cell cycle), GO:0007369 (gastrulation), GO:0002009 (morphogenesis of an epithelium), GO:0055113 (epiboly involved in gastrulation with mouth forming second), GO:0060429 (epithelium development), GO:0002011 (morphogenesis of an epithelial sheet), GO:0001702 (gastrulation with mouth forming second), GO:0090504 (epiboly)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005815 (microtubule organizing center), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0099080 (supramolecular complex), GO:0099081 (supramolecular polymer), GO:0005813 (centrosome), GO:0043229 (intracellular organelle), GO:0043228 (non-membrane-bounded organelle), GO:0099512 (supramolecular fiber), GO:0043232 (intracellular non-membrane-bounded organelle), GO:0005856 (cytoskeleton), GO:0099513 (polymeric cytoskeletal fiber), GO:0005819 (spindle), GO:0005874 (microtubule), GO:0072686 (mitotic spindle), GO:0015630 (microtubule cytoskeleton)
Protein: Paired box protein Pax-5 isoform X1 (A0A8M2BI63)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Nucleus
InterPro domains:
- IPR043565: PAX family (family) [14-365]
- IPR009057: Homedomain-like superfamily (homologous_superfamily) [18-140]
- IPR022130: Paired-box protein 2 C-terminal (domain) [283-388]
- IPR001523: Paired domain (domain) [16-142]
- IPR036388: Winged helix-like DNA-binding domain superfamily (homologous_superfamily) [11-149]
- IPR043182: Paired DNA-binding domain (domain) [50-66]
Sequence:
MDLDQKGPSLRIGRSGHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIRPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAERVCDNDSVPSVSSINRIIRTKVQQPPGQSGAVSAHNLASTVAVTQVSAVTSDAAGSSYSISGILGISSPADASKRKRDDPLQDSPLANGHSHSGRDFLRKQMRGELFTPQQLEVLDHVFDRQPFPDIYPIPDSISYKPSQTTDYSAMASLAGGLEEMKNSLANQTGAELGSTVAGPQSYPLVSGRDLASTTLPGYPPHVPPTGQGSYSTPSLTGMVPGGDFSGSPYSHPQYSTYNESWRFANPSLLVFQQEYGSLLGSERAASSGLFPGQTPQPTGSPYYYSAATRGAGTAATATASAYDRH
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0097159 (organic cyclic compound binding), GO:1901363 (heterocyclic compound binding), GO:0003676 (nucleic acid binding), GO:0003677 (DNA binding), GO:0043565 (sequence-specific DNA binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0009987 (cellular process), GO:0050896 (response to stimulus), GO:0032501 (multicellular organismal process), GO:0009605 (response to external stimulus), GO:0048869 (cellular developmental process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0060004 (reflex), GO:0048839 (inner ear development), GO:0009888 (tissue development), GO:0048468 (cell development), GO:0030154 (cell differentiation), GO:0048731 (system development), GO:0048513 (animal organ development), GO:0022008 (neurogenesis), GO:0060113 (inner ear receptor cell differentiation), GO:0030855 (epithelial cell differentiation), GO:0007399 (nervous system development), GO:0060429 (epithelium development), GO:0008544 (epidermis development), GO:0030182 (neuron differentiation), GO:0048666 (neuron development), GO:0007423 (sensory organ development), GO:0042490 (mechanoreceptor differentiation), GO:0060119 (inner ear receptor cell development), GO:0035315 (hair cell differentiation), GO:0009913 (epidermal cell differentiation), GO:0043583 (ear development), GO:0048699 (generation of neurons)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)