lokahq/bioreason-rl huggingface dataset:
Protein: Small nuclear ribonucleoprotein G (F7F7T6)
Organism: Rattus norvegicus (Rat)
Function: Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing
Subcellular location: Cytoplasm, cytosol. Nucleus. Note=SMN-mediated assembly into core snRNPs occurs in the cytosol before SMN-mediated transport to the nucleus to be included in spliceosomes
InterPro domains:
- IPR044641: Sm-like protein Lsm7/SmG (family) [1-76]
- IPR010920: LSM domain superfamily (homologous_superfamily) [7-74]
- IPR034098: Small nuclear ribonucleoprotein G (family) [5-74]
- IPR001163: Sm domain, eukaryotic/archaea-type (domain) [7-72]
- IPR047575: Sm domain (domain) [4-76]
Sequence:
MSKAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMVVIRGNSIIMLEALERV
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0044877 (protein-containing complex binding), GO:0043021 (ribonucleoprotein complex binding), GO:0070990 (snRNP binding), GO:1990446 (U1 snRNP binding)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0044237 (cellular metabolic process), GO:0071704 (organic substance metabolic process), GO:0044238 (primary metabolic process), GO:0006807 (nitrogen compound metabolic process), GO:0006725 (cellular aromatic compound metabolic process), GO:0034641 (cellular nitrogen compound metabolic process), GO:1901360 (organic cyclic compound metabolic process), GO:0006139 (nucleobase-containing compound metabolic process), GO:0043170 (macromolecule metabolic process), GO:0046483 (heterocycle metabolic process), GO:0090304 (nucleic acid metabolic process), GO:0010467 (gene expression), GO:0016070 (RNA metabolic process), GO:0006396 (RNA processing), GO:0008380 (RNA splicing), GO:0006397 (mRNA processing), GO:0016071 (mRNA metabolic process), GO:0000398 (mRNA splicing, via spliceosome), GO:0000375 (RNA splicing, via transesterification reactions), GO:0000377 (RNA splicing, via transesterification reactions with bulged adenosine as nucleophile)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0032991 (protein-containing complex), GO:1990904 (ribonucleoprotein complex), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0140513 (nuclear protein-containing complex), GO:0120114 (Sm-like protein family complex), GO:0030532 (small nuclear ribonucleoprotein complex), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0097525 (spliceosomal snRNP complex), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus), GO:0005685 (U1 snRNP)
Protein: Norrie disease homolog (Human) (Predicted), isoform CRA_a (A6JZW8)
Organism: Rattus norvegicus (Rat)
InterPro domains:
- IPR029034: Cystine-knot cytokine (homologous_superfamily) [22-131]
- IPR004133: DAN (domain) [32-128]
- IPR003064: Norrie disease protein (family) [1-131]
- IPR006207: Cystine knot, C-terminal (domain) [37-130]
Sequence:
MRNHVLAASISMLSLLAIMGDTDSKTDSSFLMDSQRCMRHHYVDSISHPLYKCSSKMVLLARCEGHCSQASRSEPLVSFSTVLKQPFRSSCHCCRPQTSKLKALRLRCSGGMRLTATYRYILSCHCEECSS
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0098772 (molecular function regulator activity), GO:0005488 (binding), GO:0140677 (molecular function activator activity), GO:0030545 (signaling receptor regulator activity), GO:0005515 (protein binding), GO:0005102 (signaling receptor binding), GO:0046983 (protein dimerization activity), GO:0042802 (identical protein binding), GO:0030546 (signaling receptor activator activity), GO:0048018 (receptor ligand activity), GO:0042803 (protein homodimerization activity), GO:0001664 (G protein-coupled receptor binding), GO:0005125 (cytokine activity), GO:0005109 (frizzled binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0000003 (reproduction), GO:0032501 (multicellular organismal process), GO:0022414 (reproductive process), GO:0048856 (anatomical structure development), GO:0044706 (multi-multicellular organism process), GO:0032504 (multicellular organism reproduction), GO:0003006 (developmental process involved in reproduction), GO:0048609 (multicellular organismal reproductive process), GO:0044703 (multi-organism reproductive process), GO:0001893 (maternal placenta development), GO:0007565 (female pregnancy), GO:0060135 (maternal process involved in female pregnancy), GO:0009888 (tissue development), GO:0046697 (decidualization), GO:0048513 (animal organ development), GO:0001890 (placenta development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0030312 (external encapsulating structure), GO:0031012 (extracellular matrix), GO:0062023 (collagen-containing extracellular matrix)
Protein: Poly(A) binding protein, nuclear 1, isoform CRA_c (A6KGX1)
Organism: Rattus norvegicus (Rat)
InterPro domains:
- IPR000504: RNA recognition motif domain (domain) [60-137]
- IPR035979: RNA-binding domain superfamily (homologous_superfamily) [53-165]
- IPR012677: Nucleotide-binding alpha-beta plait domain superfamily (homologous_superfamily) [12-187]
Sequence:
MALEKELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTNYNSSRSRFYSGFNSRPRGRIYRGRARATSWYSPY
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0097159 (organic cyclic compound binding), GO:1901363 (heterocyclic compound binding), GO:0005515 (protein binding), GO:0003676 (nucleic acid binding), GO:0019899 (enzyme binding), GO:0003723 (RNA binding), GO:0070063 (RNA polymerase binding), GO:0003727 (single-stranded RNA binding), GO:0070717 (poly-purine tract binding), GO:0008143 (poly(A) binding)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0042221 (response to chemical), GO:1901698 (response to nitrogen compound), GO:0010033 (response to organic substance), GO:1901700 (response to oxygen-containing compound), GO:1902074 (response to salt), GO:0042220 (response to cocaine), GO:0014070 (response to organic cyclic compound), GO:0010243 (response to organonitrogen compound), GO:0043279 (response to alkaloid)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0016234 (inclusion body), GO:0043227 (membrane-bounded organelle), GO:0042405 (nuclear inclusion body), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: RCG49295, isoform CRA_g (A6J388)
Organism: Rattus norvegicus (Rat)
Function: Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain
Subcellular location: Cell membrane; Single-pass type I membrane protein. Membrane; Single-pass type I membrane protein
InterPro domains:
- IPR050174: Protocadherin/Cadherin-related Cell Adhesion (family) [25-820]
- IPR031904: Cadherin, C-terminal catenin-binding domain (domain) [809-861]
- IPR013164: Cadherin, N-terminal (domain) [29-111]
- IPR032455: Cadherin, cytoplasmic C-terminal domain (domain) [687-771]
- IPR020894: Cadherin conserved site (conserved_site) [229-559]
- IPR015919: Cadherin-like superfamily (homologous_superfamily) [28-665]
- IPR002126: Cadherin-like (domain) [47-681]
Sequence:
MAAPYGSYRRGLIWICIYLGSLCYIRAEQIRYSVPEELEKGSAVGNLAADLGLEPKKLGERGVRIVSRGKTQLFALNPRSGSLVTAGRIDREGLCDRSPKCTANLEILLEDKVRILAVEVEIIDVNDNAPSFGAQQREIKVAESEIPGTRFPLPEAFDPDIGVNALQGYQLSSTGHFSLDVQNGPDGIKYPELVLEKALDREEEAFHYLVLTAFDGGDPVRSGTATIQITVVDTNDNAPVFTQPEYHISVKENLPVGTRLLTVKASDPDEGANGEVTYSFRNVRDKISQLFQLNSLTGDITMVGELDYEDSGFYDVDVEAHDGPGLRARSKVLVTVLDVNDNAPEVTVTSLTSSIQETSPPGTVIALFNVHDSDSGENGLVTCSIPDNLPFRLEKTYGNYHQLLIHRTLDREEVSDYNITITATDQGTPPLSTETYISLQVVDINDNPPTFTHASYSAYIPENNPRGAAILSITAQDPDSGENAQVIYSLSEDTIQGAPLSSYISINSNTGVLYALRSFDYEQFQDLKLLVTARDSGNPPLSSNASLSLFVLDQNDNTPEILYPTVPTDGSTGVELTPRSAEPGYLVTKVVAVDKDSGQNAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQNLVVAVQDHGQPPLSATVTLTIAVSDNIPDILADLGNINPHIDQEDSDITLYLVVAVAVVSCVFLAFVIVLLIHRLRRWHSTRLLQAAGNGLSSMPTSHFVGVDGVHAFLQTYSHEVSLTADSGKSHLIFPQPNYADTLISQESCAKSDPLLVSQDLLEIKGDSSLQQAPPNTDWRFSQAQRPGTSGSQNGDETGTWPNNQFDTEMLQAMILASASEAADGTLPVLTSL
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0000003 (reproduction), GO:0032501 (multicellular organismal process), GO:0022414 (reproductive process), GO:0032504 (multicellular organism reproduction), GO:0003006 (developmental process involved in reproduction), GO:0019953 (sexual reproduction), GO:0048609 (multicellular organismal reproductive process), GO:0007276 (gamete generation), GO:0007283 (spermatogenesis), GO:0048232 (male gamete generation)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0016020 (membrane)
Protein: RCG58659 (A6JLE7)
Organism: Rattus norvegicus (Rat)
InterPro domains:
- IPR032658: Oligodendrocyte transcription factor 2, basic helix-loop-helix domain (domain) [95-179]
- IPR011598: Myc-type, basic helix-loop-helix (bHLH) domain (domain) [108-168]
- IPR050359: Basic helix-loop-helix transcription factors (family) [62-227]
- IPR036638: Helix-loop-helix DNA-binding domain superfamily (homologous_superfamily) [98-183]
Sequence:
MDSDASLVSSRPSSPEPDDLFLPARSKGGSSSGFTGGTVSSSTPSDCPPELSSELRGAMGTAGAHPGDKLGGGGFKSSSSSTSSSTSSAATSSTKKDKKQMTEPELQQLRLKINSRERKRMHDLNIAMDGLREVMPYAHGPSVRKLSKIATLLLARNYILMLTNSLEEMKRLVSEIYGGHHAGFHPSACGGLAHSTPLPTATAHPAAAAHAAHHPAVHHPILPPAAAAAAAAAAAAAVSSASLPGSGLSSVGSIRPPHGLLKSPSAAAAAPLGGGGGGSGGSGGFQHWGGMPCPCSMCQVPPPHHHVSAMGAGTLPRLTSDAK
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0009987 (cellular process), GO:0032501 (multicellular organismal process), GO:0048869 (cellular developmental process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0030154 (cell differentiation), GO:0048731 (system development), GO:0022008 (neurogenesis), GO:0010001 (glial cell differentiation), GO:0007417 (central nervous system development), GO:0007399 (nervous system development), GO:0048709 (oligodendrocyte differentiation), GO:0042063 (gliogenesis)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Tial1 cytotoxic granule-associated RNA binding protein-like 1 (Mapped), isoform CRA_e (A6IA06)
Organism: Rattus norvegicus (Rat)
InterPro domains:
- IPR000504: RNA recognition motif domain (domain) [1-146]
- IPR034496: TIAR, RNA recognition motif 3 (domain) [74-146]
- IPR035979: RNA-binding domain superfamily (homologous_superfamily) [2-149]
- IPR012677: Nucleotide-binding alpha-beta plait domain superfamily (homologous_superfamily) [1-155]
Sequence:
MATGKSKGYGFVSFYNKLDAENAIVHMGGQWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSSPKNCTVYCGGIASGLTDQLMRQTFSPFGQIMEIRVFPEKGYSFVRFSTHESAAHAIVSVNGTTIEGHVVKCYWGKESPDMTKNFQQVIRFFLALFAVSILHVYIGALEIVK
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0097159 (organic cyclic compound binding), GO:1901363 (heterocyclic compound binding), GO:0003676 (nucleic acid binding), GO:0003723 (RNA binding), GO:0003729 (mRNA binding), GO:0003730 (mRNA 3'-UTR binding)
Biological Process (BP): GO:0008150 (biological process), GO:0050789 (regulation of biological process), GO:0065007 (biological regulation), GO:0048518 (positive regulation of biological process), GO:0050794 (regulation of cellular process), GO:0048522 (positive regulation of cellular process), GO:0010941 (regulation of cell death), GO:0010942 (positive regulation of cell death), GO:0043067 (regulation of programmed cell death), GO:0043068 (positive regulation of programmed cell death), GO:0043065 (positive regulation of apoptotic process), GO:0042981 (regulation of apoptotic process), GO:1904037 (positive regulation of epithelial cell apoptotic process), GO:1904035 (regulation of epithelial cell apoptotic process)
Cellular Component (CC): GO:0005575 (cellular component), GO:0032991 (protein-containing complex), GO:0110165 (cellular anatomical entity), GO:1990904 (ribonucleoprotein complex), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0099080 (supramolecular complex), GO:0035770 (ribonucleoprotein granule), GO:0036464 (cytoplasmic ribonucleoprotein granule), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043228 (non-membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0010494 (cytoplasmic stress granule), GO:0043232 (intracellular non-membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Poly(A) binding protein, nuclear 1, isoform CRA_b (A6KGX2)
Organism: Rattus norvegicus (Rat)
InterPro domains:
- IPR000504: RNA recognition motif domain (domain) [60-137]
- IPR035979: RNA-binding domain superfamily (homologous_superfamily) [53-165]
- IPR012677: Nucleotide-binding alpha-beta plait domain superfamily (homologous_superfamily) [11-179]
Sequence:
MALEKELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIMSLEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLFRGRQIKVIPKRTNRPGISTTDRGFPRARYRARTTNYNSSRSRFYSGFNSRPRGRIYRSG
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0097159 (organic cyclic compound binding), GO:1901363 (heterocyclic compound binding), GO:0005515 (protein binding), GO:0003676 (nucleic acid binding), GO:0019899 (enzyme binding), GO:0003723 (RNA binding), GO:0070063 (RNA polymerase binding), GO:0003727 (single-stranded RNA binding), GO:0070717 (poly-purine tract binding), GO:0008143 (poly(A) binding)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0042221 (response to chemical), GO:1901698 (response to nitrogen compound), GO:0010033 (response to organic substance), GO:1901700 (response to oxygen-containing compound), GO:1902074 (response to salt), GO:0042220 (response to cocaine), GO:0014070 (response to organic cyclic compound), GO:0010243 (response to organonitrogen compound), GO:0043279 (response to alkaloid)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0016234 (inclusion body), GO:0043227 (membrane-bounded organelle), GO:0042405 (nuclear inclusion body), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1 (Predicted), isoform CRA_c (A6I3D6)
Organism: Rattus norvegicus (Rat)
InterPro domains:
- IPR000953: Chromo/chromo shadow domain (domain) [214-260]
- IPR001005: SANT/Myb domain (domain) [618-666]
- IPR017884: SANT domain (domain) [617-668]
- IPR032451: SMARCC, C-terminal (domain) [871-952]
- IPR032448: SMARCC, SWIRM-associated domain (domain) [705-771]
- IPR036420: BRCT domain superfamily (homologous_superfamily) [166-304]
- IPR032450: SMARCC, N-terminal (domain) [31-164]
- IPR049898: MarR-like, BRCT and chromo domains module (domain) [27-301]
- IPR036388: Winged helix-like DNA-binding domain superfamily (homologous_superfamily) [454-541]
- IPR009057: Homedomain-like superfamily (homologous_superfamily) [444-671]
- IPR007526: SWIRM domain (domain) [448-545]
Sequence:
MATTAGGGPGAAAGAVGAGGAAAASGLAVYRRKDGGPASKFWESPDTVSQLDSVRVWLGKHYKKYVHADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLTRPNIYLIPDIDLKLANKLKDIIKRHQGTFTDEKSKASHHIYPYPSSQEDEEWLRPVMRRDKQVLVHWGFYPDSYDTWVHSNDVDAEIEDAPIPEKPWKVHVKWILDTDVFNEWMNEEDYEVDENRKPVSFRQRISTKNEEPVRSPERRERKASANARKRKHSPSPPPPTATESRKKSGKKGQASLYGKRRNQKDEDEQEDLTKDMEDPTPVPNIEEVLLPKNVNPKKDSENTPVKGGTVADLDEQDEEAVTTGGKEDEDPSKGDPSRSADAGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVDPESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPIDLQNFGLRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGSEEEKMETDPDGQQPEKAENKGENESDEGDKIQDGENEKNSEKERDSDTSEDVKPEEKENEENKELTDTCKERESDTGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQQQHGQPPQQAHQHPGGPGLAPLGAAGHPGMMPHQQPPPYPMMHHQMPPPHPPQPGQIPGPGSMMPGQPMPGRMIPTVAANIHPTGSGPTPPGMPPMPGNILGPRVPLTAPNGMCK
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0000003 (reproduction), GO:0032501 (multicellular organismal process), GO:0022414 (reproductive process), GO:0003006 (developmental process involved in reproduction), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0048608 (reproductive structure development), GO:0048731 (system development), GO:0048513 (animal organ development), GO:0048732 (gland development), GO:0061458 (reproductive system development), GO:0001655 (urogenital system development), GO:0030850 (prostate gland development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Gap junction protein (A6HIW0)
Organism: Rattus norvegicus (Rat)
Function: One gap junction consists of a cluster of closely packed pairs of transmembrane channels, the connexons, through which materials of low MW diffuse from one cell to a neighboring cell
Subcellular location: Cell junction, gap junction. Cell membrane; Multi- pass membrane protein. Membrane; Multi-pass membrane protein
InterPro domains:
- IPR000500: Connexin (family) [1-220]
- IPR038359: Connexin, N-terminal domain superfamily (homologous_superfamily) [2-222]
- IPR013092: Connexin, N-terminal (domain) [3-214]
- IPR019570: Connexin, cysteine-rich domain (domain) [146-212]
- IPR017990: Connexin, conserved site (conserved_site) [168-184]
Sequence:
MGEWAFLGSLLDAVQLQSPLVGRLWLVIMLIFRILVLATVGGAVFEDEQEEFVCNTLQPGCRQTCYDRAFPVSHYRFWLFHILLLSAPPVLFVIYSMHQASKEAGGAQPAPPCARGRAEVPCSPCALRARRARRCYLLSVALRLLAELAFLGGQALLYGFRVAPHYACAGPPCPHTVDCFVSRPTEKTVFVVFYFAVGLLSALLSVAELGHLLWKGRQRAKLLPPPPPSPSLPSQRGDPDPFGPPAYAHRSPAGDSEGEGGSGHSKASLATVRQDLAI
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005215 (transporter activity), GO:0022857 (transmembrane transporter activity), GO:0022803 (passive transmembrane transporter activity), GO:0015267 (channel activity), GO:0022829 (wide pore channel activity), GO:0005243 (gap junction channel activity)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0042221 (response to chemical), GO:0010033 (response to organic substance), GO:1901700 (response to oxygen-containing compound), GO:0009743 (response to carbohydrate), GO:0034284 (response to monosaccharide), GO:0009746 (response to hexose), GO:0009749 (response to glucose)
Cellular Component (CC): GO:0005575 (cellular component), GO:0032991 (protein-containing complex), GO:0110165 (cellular anatomical entity), GO:0016020 (membrane), GO:0071944 (cell periphery), GO:0098796 (membrane protein complex), GO:0030054 (cell junction), GO:0098797 (plasma membrane protein complex), GO:0005886 (plasma membrane), GO:0070161 (anchoring junction), GO:0005922 (connexin complex), GO:0005911 (cell-cell junction), GO:0005921 (gap junction)
Protein: RCG49803, isoform CRA_b (A6K4R8)
Organism: Rattus norvegicus (Rat)
InterPro domains:
- IPR002939: Chaperone DnaJ, C-terminal (domain) [210-413]
- IPR018253: DnaJ domain, conserved site (conserved_site) [135-154]
- IPR001623: DnaJ domain (domain) [92-169]
- IPR001305: Heat shock protein DnaJ, cysteine-rich domain (domain) [223-301]
- IPR051938: Apoptosis and cytoskeleton modulation protein (family) [1-449]
- IPR012724: Chaperone DnaJ (family) [90-450]
- IPR036869: Chaperone J-domain superfamily (homologous_superfamily) [89-202]
- IPR036410: Heat shock protein DnaJ, cysteine-rich domain superfamily (homologous_superfamily) [223-299]
- IPR008971: HSP40/DnaJ peptide-binding (homologous_superfamily) [207-424]
Sequence:
MAARCSPRWFRVAVGTPRLPAAAGRGVQQPQGGVVAASLCRKLCVSAFGLSMGAHGPRALLTLRPGVRLTGTKSFPFVCTASFHTSASLAKDDYYQILGVPRNASQKDIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSAGFDPGASSSGQGYWRGGPSVDPEELFRKIFGEFSSSPFGDFQNVFDQPQEYIMELTFNQAAKGVNKEFTVNIMDTCERCDGKGNEPGTKVQHCHYCSGSGMETINTGPFVMRSTCRRCGGRGSIITNPCVVCRGAGQAKQKKRVTVPVPAGVEDGQTVRMPVGKREIFVTFRVQKSPVFRRDGADIHSDLFISIAQAILGGTAKAQGLYETINVTIPAGIQTDQKIRLTGKGIPRINSYGYGDHYIHIKIRVPKRLSSRQQNLILSYAEDETDVEGTVNGVTHTSTGKRSTGN
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding), GO:0031072 (heat shock protein binding), GO:0030544 (Hsp70 protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0065007 (biological regulation), GO:0050789 (regulation of biological process), GO:0065009 (regulation of molecular function), GO:0019222 (regulation of metabolic process), GO:0050794 (regulation of cellular process), GO:0060255 (regulation of macromolecule metabolic process), GO:0031323 (regulation of cellular metabolic process), GO:0080090 (regulation of primary metabolic process), GO:0044092 (negative regulation of molecular function), GO:0051090 (regulation of DNA-binding transcription factor activity), GO:0009889 (regulation of biosynthetic process), GO:0051171 (regulation of nitrogen compound metabolic process), GO:0019219 (regulation of nucleobase-containing compound metabolic process), GO:0051252 (regulation of RNA metabolic process), GO:0010556 (regulation of macromolecule biosynthetic process), GO:0010468 (regulation of gene expression), GO:0043433 (negative regulation of DNA-binding transcription factor activity), GO:0031326 (regulation of cellular biosynthetic process), GO:2001141 (regulation of RNA biosynthetic process), GO:0006355 (regulation of DNA-templated transcription), GO:0032088 (negative regulation of NF-kappaB transcription factor activity), GO:1903506 (regulation of nucleic acid-templated transcription)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0043229 (intracellular organelle), GO:0005739 (mitochondrion), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle)