lokahq/bioreason-rl huggingface dataset:
Protein: Heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform X2 (A0A8M6Z0X6)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Nucleus
InterPro domains:
Sequence:
MSGLNVKKLKVNELKEELQKRGLDTRGLKADLADRLQAALEAEEAGGAPSDEQEKEDFETGGEPGEGSDDQEDEFADREQDFGEEAKAQFDDGNSTDLFQGGFDDQENESNGESNGDSTEAPMPDFGSSDAEQKKQFQEPKAMQEYREDEVKQELEESPSHPEPQEEQNFEEPKSRQIPEEDSNKRSQQENSGRYDVKSEYKADEDAPQQAERSSEWDAQAKSEDDRHSSHSRKRSHDESRGYGYYEHREERRGRSPQPPAEEEEEDIDDNLVVIDTYNCDLHFKVARDRYSGYPLTIEGFAYLWAGARATYGVNKGRVCFEMKINEEIPVKHLPSTEPDPHVVRIGWSLDSCSTQLGEEPFSFGYGGTGKKSCNCKFEDYGEKFTESDILGCYIDFESSEEIEIAFSKNGKSLGSCYRVSREELAGRALFPHVLVKNCAVEFNFGQREEPYFPPPEGFTYLQDISLEDRVRGSVGPANKTDCEILMMVGLPGSGKTTWALKYAKENPEKKFNILGTNAIMEKMKVMGLRRQRNYAGRWDVLIQQATQCLNRLIQIAARKKRNYILDQQTLCCLTLVSSWTR
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0008152 (metabolic process), GO:0009987 (cellular process), GO:0044237 (cellular metabolic process), GO:0071704 (organic substance metabolic process), GO:0044238 (primary metabolic process), GO:0006807 (nitrogen compound metabolic process), GO:0006725 (cellular aromatic compound metabolic process), GO:0034641 (cellular nitrogen compound metabolic process), GO:1901360 (organic cyclic compound metabolic process), GO:0006139 (nucleobase-containing compound metabolic process), GO:0043170 (macromolecule metabolic process), GO:0046483 (heterocycle metabolic process), GO:0090304 (nucleic acid metabolic process), GO:0010467 (gene expression), GO:0016070 (RNA metabolic process), GO:0006396 (RNA processing), GO:0008380 (RNA splicing), GO:0006397 (mRNA processing), GO:0016071 (mRNA metabolic process), GO:0000398 (mRNA splicing, via spliceosome), GO:0000375 (RNA splicing, via transesterification reactions), GO:0000377 (RNA splicing, via transesterification reactions with bulged adenosine as nucleophile)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Death domain-associated protein 6 (A0A8M2B6F2)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Chromosome, centromere. Cytoplasm. Nucleus, PML body. Nucleus, nucleolus. Nucleus, nucleoplasm
InterPro domains:
- IPR046426: Daxx, histone-binding domain superfamily (homologous_superfamily) [237-448]
- IPR031333: Daxx, N-terminal Rassf1C-interacting domain (domain) [101-197]
- IPR038298: Daxx, N-terminal domain superfamily (homologous_superfamily) [107-195]
- IPR046378: Daxx, histone-binding domain (domain) [242-447]
Sequence:
MLSCTKIQRRVSGSERVNADFETPVWILTVLINSMLSAQQIRSPPFRMAGAGMESIVILDDDDEEAASTSASCSQATAQHLKTPVKSQPVPAPTHITQSPFASAKKDTHVLKVENEKLFNEFVEHCSKHSQEHPEVMTYLQTRYSKALPTFLTSVEFRNTLGRCLTRAQANAGKTFVYINELCTVLKQHTPRKRSSIQSLSVKAKPEEKSNGVNVKEDTQGEQDGGKDVKQQEEESKKTKRASRRQIAYLENLLKVYNEEIRRLQEGDLSLDDLEKEDSSYIQEHKLKRKMMKIYEKLCELKGCNTLTGRVIEQKIPYSGTRYPEINKKVERFINSSEALLNPPDYSDILKIVQRANERYNLQLSRKQQAQISQEAFRETGNKLQERRHLDMVYNFGSHLTDPYKPTLDPALMDPALHRKLRSNRDVAISSLEEVINKYANKQEDMEVEETKKRQDRERLKKEAVNGQQSESKEKEKEEQEEKEKEDEEEEEEDEEEDDSSDPDIEDEIQASEQQAGPEDDEEDVEEEPANISDNDQPINESSPLSIKSSVQDTEEDEEQSPLSSTHEGSAETNTNTNGPAKQSLESTEIKPESIKPESIKPESIKPETIKPESIKPENTDSLAEVKTEQVSSNHVEAVSASTETVSIVSEESSTAVTRSANCSPLLPTSPLLIDETGNYRKRKRRSTENHTSAHNGNCTEDSDIPLDMGVICCSEQEDLTCLKTPPRKTARNSQATPPPKKNKVNVATQCDPEEVIVLSDSE
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0140110 (transcription regulator activity), GO:0003712 (transcription coregulator activity), GO:0003714 (transcription corepressor activity)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0009987 (cellular process), GO:0032501 (multicellular organismal process), GO:0048869 (cellular developmental process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0009888 (tissue development), GO:0048468 (cell development), GO:0030154 (cell differentiation), GO:0048731 (system development), GO:0048513 (animal organ development), GO:0031018 (endocrine pancreas development), GO:0031099 (regeneration), GO:0031100 (animal organ regeneration), GO:0035270 (endocrine system development), GO:0003309 (type B pancreatic cell differentiation), GO:0002064 (epithelial cell development), GO:0060429 (epithelium development), GO:0031016 (pancreas development), GO:0030855 (epithelial cell differentiation), GO:1990798 (pancreas regeneration), GO:0002066 (columnar/cuboidal epithelial cell development), GO:0003323 (type B pancreatic cell development), GO:0002065 (columnar/cuboidal epithelial cell differentiation), GO:0002068 (glandular epithelial cell development), GO:0002067 (glandular epithelial cell differentiation), GO:0035883 (enteroendocrine cell differentiation)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Serine/threonine-protein kinase receptor (A0A8M2BFL8)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Membrane; Single-pass type I membrane protein
InterPro domains:
- IPR008271: Serine/threonine-protein kinase, active site (active_site) [335-347]
- IPR000472: Activin types I and II receptor domain (domain) [59-114]
- IPR000719: Protein kinase domain (domain) [209-497]
- IPR000333: Ser/Thr protein kinase, TGFB receptor (family) [13-529]
- IPR045860: Snake toxin-like superfamily (homologous_superfamily) [20-120]
- IPR011009: Protein kinase-like domain superfamily (homologous_superfamily) [197-494]
- IPR017194: Transforming growth factor-beta receptor, type II (family) [79-507]
Sequence:
MGPATKLAFGVFLISCSSGAILGRSETQECVFYNYNPSLENRGNRSGIEPCVGDKDKRLHCFATWRNVSGTVEIVKQGCWLDDVNCYDSTECVEKKEDPDVFFCCCEGNMCNEKFFYNPNTAPVQSKAPFSDTKSDTKVFKATSNPLTQKPPLFSTLLYSIVPIMGIAAIVLLSFWMYRHHKLAYPPVLVPTQDPGPMPPSPTLVQKPLQLLEIKARGRFGCVWKAQLLNDYVAVKIFPIQDKLSWQNEYDIYNIPGMRHENILQFIGAEKRGSNLDIELWLITAYHEKSSLTDYLKANVVTWNELCHIAQTMARGLAYLHSDFPGHRDGHKPAIAHRDFKSKNVLLKTNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAVGLVLWELAARCTASDGPVDEYMLPFEEEVGQHPTLEDMQEVVVHKKLRPTLRECWQKHPGLAMLCETIEECWDHEAEARLSAGCVEERVVQMQRQTSVSAPEEIVTVVTMVTNVDYPPKESSL
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0009987 (cellular process), GO:0032501 (multicellular organismal process), GO:0048869 (cellular developmental process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0048870 (cell motility), GO:0009888 (tissue development), GO:0048468 (cell development), GO:0060322 (head development), GO:0030154 (cell differentiation), GO:0048731 (system development), GO:0048513 (animal organ development), GO:0030902 (hindbrain development), GO:0016477 (cell migration), GO:0007420 (brain development), GO:0048863 (stem cell differentiation), GO:0051216 (cartilage development), GO:0048864 (stem cell development), GO:0007399 (nervous system development), GO:0001501 (skeletal system development), GO:0061448 (connective tissue development), GO:0007417 (central nervous system development), GO:0060485 (mesenchyme development), GO:0048762 (mesenchymal cell differentiation), GO:0001667 (ameboidal-type cell migration), GO:0014033 (neural crest cell differentiation), GO:0014032 (neural crest cell development), GO:0090497 (mesenchymal cell migration), GO:0001755 (neural crest cell migration)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0032991 (protein-containing complex), GO:0043235 (receptor complex), GO:0005622 (intracellular anatomical structure), GO:0005737 (cytoplasm), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0098796 (membrane protein complex), GO:0098802 (plasma membrane signaling receptor complex), GO:0098797 (plasma membrane protein complex), GO:0005938 (cell cortex), GO:0005886 (plasma membrane)
Protein: Coiled-coil domain-containing protein 78 isoform X3 (A0A8M3APF6)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR029329: Domain of unknown function DUF4472 (domain) [62-168]
- IPR039873: Coiled-coil domain-containing protein 78 (family) [272-492]
Sequence:
MEDSSKQSSINQLHEQIRLLTDENVQLHERNKQLVSKLDSAQNKLGQQAASKSDLSVKLVQCEEDKLKISKDLVDVQIEANKMREQYEAEIFELKNMVLCHEGTASSLQAERDRLRQEVSAASTRLEISERNEHDLAEEFTVVKRNFLSLRDAYERERTQSEELSSELLALARTHDTLLQERERTHRHTLELERVRALLSRASQNRVKPEEFEQSKSTLGENGVQNKLREELEKLRKSYEEQQRRLEDKVVAMGREQQENKRAIQNTRLQLSQQSTECVSAAGNVDLGQKLKGFVESMLEEMKTSYRSREEQLTKAVRTYRKRIQGLSNAHQQLLIAYRMQREQILALPEHALDAGPPEAQFSPAGPELSGETEREIHRLREDKARLESQLKLAREQMAVLSESSQKTELTQEAWADVKRQIREITNSTQEAQERERIQLLTRATVAEEQLCELKEYVDNHLGRYKLEIIRLRRLLTSQEGRSNSARVNNPRPLHQTLKHSSNEI
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0009987 (cellular process), GO:0048869 (cellular developmental process), GO:0048856 (anatomical structure development), GO:0061061 (muscle structure development), GO:0009888 (tissue development), GO:0048468 (cell development), GO:0030154 (cell differentiation), GO:0048513 (animal organ development), GO:0007517 (muscle organ development), GO:0042692 (muscle cell differentiation), GO:0055001 (muscle cell development), GO:0060537 (muscle tissue development), GO:0007519 (skeletal muscle tissue development), GO:0060538 (skeletal muscle organ development), GO:0014904 (myotube cell development), GO:0051146 (striated muscle cell differentiation), GO:0014902 (myotube differentiation), GO:0048741 (skeletal muscle fiber development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005815 (microtubule organizing center), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043228 (non-membrane-bounded organelle), GO:0005813 (centrosome), GO:0043232 (intracellular non-membrane-bounded organelle), GO:0005856 (cytoskeleton), GO:0015630 (microtubule cytoskeleton)
Protein: Collagen, type XVII, alpha 1a isoform X2 (A0A8M6YXV6)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR008160: Collagen triple helix repeat (repeat) [641-1338]
- IPR050938: Collagen and Collagen-like Structural Proteins (family) [719-1124]
Sequence:
MDKLTTTKIVKVEGGSGGSGKEIQKHTETVTTTRLTSLPPKAHSGQQILTSIGNGSGSAGGAVLLEKKFITHSSAEGGASRSYVISSSSSGSSASSSSGAGSVISGFDGISGEISVTGPITSSTVKSSTSAVKSSSVVSTSITSSSAAGGELSSGYGSISSSSSEFVSGSSGGSISTSEGSMSKSRSGGGSSAVMSGEGTSSSKTVSKFSSSSPSGTRKGLSYSTVPTERKTIMNITTGGYEGSSSGNSSPEYIKKEYVSTSSAATRGRTQTRESEIRARLQSASPSARWTELDDVKRLLKGSRSGSISPPRSPTSTLPIPKKASIDVRHESQSGFDGTVLDAGFSGYYTNPNNLSYTTLQQPSSPTGGMQNNLTLSSSALDTTVYGMQNNLSTSGGAMMANGRCTGYVYGVPKNVGSAGLATTISAIPSSPITADDVFMKDGKLIAIGKENVAAKTETERLIMSKNTGKQFVPSSFNAGADTFSEDSLKREKKMISSATDPQTTTITGSKSSTKNKATYADIRKDDSDGAGCGFWTCCSWWKWLLALLFALLLLLGLLCGLIALGEQLRRLKARVDAIDGGGTSPRTSGLKTDDIPGVQSGNTINLGYEPAGQDSLILQRAILRELQSDTIRASLATSLRGERGEPGPKGDQGPPGVKGDSGFPGIPGPPGLIGHPGQEGPRGPKGSAGESGSDGLPGPRGREGPAGPRGEPGPPGIGEKGEKGSFGDVGAPGIAGPPGPVGPKGDAGAQGVPGLTGAPGPQGFRGDSGDPGPKGDKGPAGPPGVKGDQGERGPRGATGEPGQPGPAGPPGEKGLKGSTGAPGPDGVKGLRGDQGPVGLPGARGPSGPPGDSGIPGTPGLQGPPGLPGTPGQPGAKGEAGEPGRVISAGANANTVAVSGPPGPPGAPGPAGPPGLSGPIGPAGLPGSPGAKGDKGDKGEDGKPGVTESAGKKSEAGEPGPPGPPGPPGPPGDDGKPGVGEPGPAGPPGEKGEPGSFVPTSETFFAGPPGPPGPIGPKGSQGDVGPQGFPGQPGLPGEPGIGIPGQPGSPGPRGEQGLDGPLGPQGPQGPMGPMGPEGPKGDAGVPGAPGIPGYSYGGGSRSAPGPPGPPGPPGPPGEPGSQGDGSPNAVQQISDYLRSEPIRQYLAGPPGPPGPPGPSGSASDDALASRVIEYLQRDEVRQYLIGPPGPPGPPGVPGGYGFNTQEVAGRVMSLINDAGFRGLPGPPGPPGPQGPPGNSGGLVSYAANENQQHIRAEPQEYIKSHPRADENLDYTAIAKQVSDYIKAHGLLNGNAGFPGAPGRQGYPGPPGFPGEPGTPGQPGPPGQAGPPGLPGPPGLDTVHNYSNMTAVLDYIKENHMKGQKGDLGFPGIPGSPGIDGKQGIVGLPGIKGQKGERGEATYVNRRRRRSTVI
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0048856 (anatomical structure development), GO:0009888 (tissue development), GO:0008544 (epidermis development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0030054 (cell junction), GO:0070161 (anchoring junction), GO:0030055 (cell-substrate junction), GO:0030056 (hemidesmosome)
Protein: Solute carrier family 22 member 7 isoform X2 (A0A8M9Q6G5)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Membrane; Multi- pass membrane protein
InterPro domains:
- IPR020846: Major facilitator superfamily domain (domain) [86-510]
- IPR011701: Major facilitator superfamily (family) [141-474]
- IPR036259: MFS transporter superfamily (homologous_superfamily) [113-518]
Sequence:
MKFEDLITEINGFGRFQKMILCISFVGRFIIPCHFLLSNFIAAIPSHHCDISFLDADGLFGNLTEEERLIVSVPTQEDGSPVSCHMFSHPQFQLLINSSSSSDLPVVECQNGWHFDNSTFISTLATQWDLVCDNRGLNKAVATIFFVGVMFGAAFFGGMSDRFGRKPMLLVSYISGMAFALASVFSTSFTMFAVLRFFSGFTITGIVIVSSVLNLEWVDIEHRRLVSIIDSMAWAVGSTSLALIAYFIRDWRWLTVAVTSPLVLCTILWWWVPESARWLIANGDVEKAHYYLHKCAVMNRKAEVTSRIKPEALAISVSDQGKKKYTYLDLVRTPKMRKLAMLTGTVWFCVATMTYGISLNITSFGLNMYLTQFVYGAIEVPSKLIVYYLLEKIGRRKTEAGAQLFAGISLMINIFIPKDQWIGRTVVAVLGKGFAVAAFCTIVLYSSELYPTVLRQNGMGYNSFLARLGVSVAPLVLLLDTFWGQFSQTILCSVALIASVVAWNLPETRDRCLPETIEDVEGTG
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005215 (transporter activity), GO:0022857 (transmembrane transporter activity), GO:0008514 (organic anion transmembrane transporter activity)
Biological Process (BP): GO:0008150 (biological process), GO:0009987 (cellular process), GO:0051179 (localization), GO:0051234 (establishment of localization), GO:0055085 (transmembrane transport), GO:0006810 (transport), GO:0034220 (monoatomic ion transmembrane transport), GO:0098656 (monoatomic anion transmembrane transport), GO:0006811 (monoatomic ion transport), GO:0006820 (monoatomic anion transport)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0005886 (plasma membrane)
Protein: Kappa-type opioid receptor isoform 1x (A0A8M1P7D3)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Membrane; Multi- pass membrane protein
InterPro domains:
- IPR001418: Opioid receptor (family) [82-335]
- IPR017452: GPCR, rhodopsin-like, 7TM (domain) [72-324]
- IPR000276: G protein-coupled receptor, rhodopsin-like (family) [57-332]
Sequence:
MDSNVVQIFKEDKCPSSHPEKCLPNFTWQSAVSDIYNSSLNESWTTEQEAMSPLIPIITAVYSVVFVVGLVGNCLVMYVIIRYTKMKTATNIYIFNLAVADALVTTTMPFQSTDYLLNSWPFGEVVCKVFISIDYYNMFTSIFTLTMMSVDRYVAVCHPVKALDFRTPMKAKIINILIWVLSSAAGIPAMVLGSTQTNNGTTECALQFPDPYVYWDTLMKICVFIFGFVAPLLIITVCYTLMVLRLKSVRLLSGSREKDRNLRRITRLVLVVVAVFVVCWTPIHIFILVKALSHGVPETTSVMAAYFFCVALGYTNSSLNPILYAFLDENFKRCFRDFCCPGRTAGDGRGVSRVRSTLREHTCPAEAKNDGGQGRPVXLAVELSSFHGREDSNDLGLTQITTAI
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0033218 (amide binding), GO:0042277 (peptide binding)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0050789 (regulation of biological process), GO:0009987 (cellular process), GO:0023052 (signaling), GO:0065007 (biological regulation), GO:0051716 (cellular response to stimulus), GO:0007154 (cell communication), GO:0007165 (signal transduction), GO:0050794 (regulation of cellular process), GO:0007186 (G protein-coupled receptor signaling pathway)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0012505 (endomembrane system), GO:0031410 (cytoplasmic vesicle), GO:0043229 (intracellular organelle), GO:0030141 (secretory granule), GO:0043227 (membrane-bounded organelle), GO:0031982 (vesicle), GO:0099503 (secretory vesicle), GO:0043231 (intracellular membrane-bounded organelle), GO:0097708 (intracellular vesicle)
Protein: Macrophage receptor MARCO isoform X5 (A0A8M9PSH4)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
Sequence:
METEVDDFPGKASIFSQVNPLYSNNMKLCEAERYDFQHSEPKTMKSASKRHCVPVLILLFLLLIGLNSFLAYKVFTLEAWVHTHCTSAQNHELTSASSFQLGSSKNEVECFTDLCGTDGTLEHLRTQINQLNATAEKAIVCPPGPPGPPGSNGIPGFPGQKGIPGSPGRVGEPGAPGQKGQTGDPGIKGERGMVGFPGIPGAPGRKGDSGERGLQGLPGNDGSPGQDGRTGPQGMPGPSGSQEAFSTIDTIPRGPQPLSRTFSFTVPYWWTNLSSPT
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0051179 (localization), GO:0050896 (response to stimulus), GO:0044419 (biological process involved in interspecies interaction between organisms), GO:0051234 (establishment of localization), GO:0009605 (response to external stimulus), GO:0006950 (response to stress), GO:0051707 (response to other organism), GO:0009607 (response to biotic stimulus), GO:0006952 (defense response), GO:0043207 (response to external biotic stimulus), GO:0009617 (response to bacterium), GO:0006810 (transport), GO:0098542 (defense response to other organism), GO:0016192 (vesicle-mediated transport), GO:0042742 (defense response to bacterium), GO:0006909 (phagocytosis)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0005886 (plasma membrane), GO:0043231 (intracellular membrane-bounded organelle)
Protein: Catenin delta-2 isoform X2 (A0A8M3AQ91)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR000225: Armadillo (repeat) [578-1019]
- IPR028435: Plakophilin/Delta catenin (family) [48-1059]
- IPR011989: Armadillo-like helical (homologous_superfamily) [548-1038]
- IPR016024: Armadillo-type fold (homologous_superfamily) [548-1024]
Sequence:
MPVPDQPSGTENSSMLSPVLNASNGDGSETETTSAILASVKEQELQFERLTRELEAERQIVATQLERCKLGSETGSMSSISSADEKFRWNNQDGQKDIEEELTTGLELVDSCIRSLQESGILDSQEFTAGERPGILSQSALQLNNQEGTFPYPVSYHSNQTLALGDLSASQPPRSGQVGGALHSYNQVTSNRVAQLAARETAARAHSRDSYAQSHGSAFHMPDDQPTVPVNYSCATLPAQRVSSPFSMQALGSPSKLQRLGSASDMPSYATLARVSSPKQSPSRLAKSYSTSSPINMAAGGGSSSSPLHMAGAGNVSNSSPLHQLSAAVGSYATLSPTKRMLHTTDQYKISHDLYANATLQRPGSLAGSRGSYSSQHSHLGSELRPLQSPEHHIDPIYEDRVYQKAPLRNFNQAQDPMNQFCDQVLNFLLCPYSPVIAPSSPGVDSIPLQRTGSQNATGTFPRAGYATGPGASTADYANPYRTLQFCPSTDSPYSKSGPALPPEATLVRSPSVDSIQKDPRYDPEFLVWNQNQAEQRMTKEFGWRDPELPEVIQMLQHQFPSVQSNAAAYLQHLCFGDNKIKSEIRRQGGIQLLVDLLDHRMTDVHRSACGALRNLVYGKANDDNKIALKNCGGIPALVRLLRKTTDVEIRELLTGVLWNLSSCDALKMPIIQDALAVLTNTVIIPHSGWDTSPLQDDRKLHLHSSQVLRNATGCLRNVSSAGEEARRRMRECEGLTDALLYVIQTALGTSEIDSKTIENCVCILRNLSYRLAAETSQGQQMGSEELDGVLCTDASGKDAESSGCWGKKKKKKKSHDQWDGVGPFPDSSDPPKGLQMLWHPSIVKPYLTLLSECSNPDTLEGAAGALQNLAAGSWKWSVYIRAAVRKEKGLPILVELLRIDNDRVVCAVATALRNMALDVRNKELIGKYAMRDLVHRLPGGNNNNSTGTGGSSKSMSDDTITAICCALHEVITKNMENTKALRDAGGIEKLIGIARSKGDKHTPKVVKAASQVLNSMWQYRDLRSLYKKDGYSQYHFVGSSSTIERDRQRPYSSSRTPSISPVRTSPNNRSASAPTSPREMMSLKERKTDYESTGSNSTYHGNKGEHTSRKDAMAAQISSGTSTLFRGAYMSPADDIKHNQVSAQGNPPEAYPPFQTPPGANFEEPYYEDQAHKRPPPAADGTMHLGLKSTGNYVDFYSASRPYSELNYETSHYPASPDSWV
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0009987 (cellular process), GO:0032501 (multicellular organismal process), GO:0048869 (cellular developmental process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0048870 (cell motility), GO:0030154 (cell differentiation), GO:0016477 (cell migration), GO:0048731 (system development), GO:0001764 (neuron migration), GO:0022008 (neurogenesis), GO:0007399 (nervous system development), GO:0048699 (generation of neurons)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0030054 (cell junction), GO:0070161 (anchoring junction), GO:0005911 (cell-cell junction), GO:0043296 (apical junction complex), GO:0070160 (tight junction), GO:0005923 (bicellular tight junction)
Protein: Bromodomain-containing protein 8 isoform X2 (A0A8M6Z445)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR037966: Brd8, Bromo domain (domain) [655-758]
- IPR036427: Bromodomain-like superfamily (homologous_superfamily) [621-770]
- IPR001487: Bromodomain (domain) [651-759]
Sequence:
MLSLGPTEPWSIREKLCLASSVMRSGDQNWVSVSRAIKPFSESGRPPDWFSQKHCASQYSQLLETTEAPKRKRGEKGEVVETIEDVIVRRLTAERIEELKRLIKDTQEKYRKLKKEVDLIQAGHVDPKLEELWAEIELKKKQEEEEAEQKKRATEAAYQIRQAAKNTPKRVPSVTVRSPPGASSPSMDILQPDASQPMTDESCASPMAQGVTVFMPVSDVMGPGPKESGLSSLVDDSPQKKHLAPKATPPPSPLLSELLKKGSLIAASSRLVVEGEVATGLSNGSHAVELHTSATVLPATQDITADAPTLSRLLESVTPAQQPVSADPPKPPTVVPPAPDHLSVPKSGDAAIAEGSGAEAVMAGSSTPAEVEGKETELVEEDTVVSVSYMGHELDLETVGDIIAIIEEKVDDPVEALDAAAVEAALSLCEDPAVGGHPLTSPWESQTFKAAEPEPMIQQSAIPAGAESAPNSAIVQGEMEVLVEEATETEAVEGVTEEPEVPSAPETEQSQDSEVKTEVERGGEGEGGVEETAQPENRTPSPAVKCEGEDWVQPETVTPCLDSEDSSASAKDAKEVKEEDGGSEVDVDEGMEMKECGDGDGEGPYLSEVDPPASESEDGYGSHSQRYTTADSTASSPASSQFSMCSEDQEALQAQKIWKKAIMLVWRAAANHRYASVFLQPVSDDIAPGYHSIVHRPMDLSAIKKNIESGQIRTTAEFQRDIMLMFQNAVMYNSSDHDVYHMALEMQRDVLEQIQQFLATQLIMQTSESGISTKSLRGREANRKQDPNEKTLSPAHKEPHLEPEPPARRKRNNSKQDTVEKDSLSMASPAFLLSLFDGGTRGRRSAIEADMKMKK
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0009987 (cellular process), GO:0048869 (cellular developmental process), GO:0048856 (anatomical structure development), GO:0030154 (cell differentiation), GO:0048468 (cell development), GO:0002244 (hematopoietic progenitor cell differentiation), GO:0030097 (hemopoiesis)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)