Protein: RNA binding protein fox-1 homolog (A0A8M9PM01)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Function: RNA-binding protein that regulates alternative splicing events
Subcellular location: Nucleus
InterPro domains:
- IPR047131: RNA binding protein fox-1 homolog 1-like (family) [54-425]
- IPR012677: Nucleotide-binding alpha-beta plait domain superfamily (homologous_superfamily) [156-257]
- IPR034237: FOX1, RNA recognition motif (domain) [166-241]
- IPR017325: RNA binding protein fox-1 homolog 1-3 (family) [57-425]
- IPR000504: RNA recognition motif domain (domain) [166-242]
- IPR025670: Fox-1 C-terminal domain (domain) [285-391]
- IPR035979: RNA-binding domain superfamily (homologous_superfamily) [159-243]
Sequence:
MLMSTDVASVMLPVSRGILDRDLDSGSAAVRGMKRGDPEPEGAAAAGDSTGAECKRARMDGTEDIAQGSQDSMCGEEGAVVPFFPPPPPPPPQNGLSLEFSSGGGGGSSVYSSSGQTEAVAGTSSGASNPSTQLSDASPQPDNQLVLVSNAVAIREDSSEAKGTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFESSGDAEKARERLHGTIVEGRKIEVNNATARVMTNKKMVSPYANGDSLSTLPYAGWKLSPMMGAMYGPEFYAVPGFPYPTTAAAAAAASTAASFRGAHLRGRGRPVYGAVRAAVPQPAIPAYPGIVFQDTLVSSRMPQSGYTAYRYTQPTAVASPTAAAAAAAAAYSDSYGRVYAADPYAAALATPAAAAAAAYGVGAMATLYRGGYSRFSPY
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0097159 (organic cyclic compound binding), GO:1901363 (heterocyclic compound binding), GO:0005515 (protein binding), GO:0003676 (nucleic acid binding), GO:0003723 (RNA binding), GO:0003729 (mRNA binding), GO:0003730 (mRNA 3'-UTR binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0009987 (cellular process), GO:0065007 (biological regulation), GO:0050789 (regulation of biological process), GO:0048869 (cellular developmental process), GO:0048856 (anatomical structure development), GO:0019222 (regulation of metabolic process), GO:0050794 (regulation of cellular process), GO:0060255 (regulation of macromolecule metabolic process), GO:0031323 (regulation of cellular metabolic process), GO:0061061 (muscle structure development), GO:0080090 (regulation of primary metabolic process), GO:0009888 (tissue development), GO:0048468 (cell development), GO:0030154 (cell differentiation), GO:0048513 (animal organ development), GO:0051171 (regulation of nitrogen compound metabolic process), GO:0019219 (regulation of nucleobase-containing compound metabolic process), GO:0051252 (regulation of RNA metabolic process), GO:0007517 (muscle organ development), GO:0042692 (muscle cell differentiation), GO:0055001 (muscle cell development), GO:0010468 (regulation of gene expression), GO:0060537 (muscle tissue development), GO:0007519 (skeletal muscle tissue development), GO:0060538 (skeletal muscle organ development), GO:0043484 (regulation of RNA splicing), GO:0014904 (myotube cell development), GO:0051146 (striated muscle cell differentiation), GO:0014902 (myotube differentiation), GO:0048741 (skeletal muscle fiber development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)