lokahq/bioreason-rl huggingface dataset:
Protein: Glucosidase 2 subunit beta (F7EM53)
Organism: Rattus norvegicus (Rat)
InterPro domains:
- IPR011992: EF-hand domain pair (homologous_superfamily) [209-258]
- IPR036055: LDL receptor-like superfamily (homologous_superfamily) [66-106]
- IPR009011: Mannose-6-phosphate receptor binding domain superfamily (homologous_superfamily) [402-510]
- IPR044865: MRH domain (domain) [410-511]
- IPR002048: EF-hand domain (domain) [208-243]
- IPR028146: Glucosidase II beta subunit, N-terminal (domain) [6-162]
- IPR039794: Glucosidase II beta subunit-like (family) [3-524]
- IPR018247: EF-Hand 1, calcium-binding site (binding_site) [221-233]
- IPR036607: Glucosidase 2 subunit beta-like (domain) [372-509]
Sequence:
MLLLLLLLPLCWAVEVKRPRGVSLSNHHFYDESKPFTCLDGTATIPFDQVNDDYCDCKDGSDEPGTAACPNGSFHCTNTGYKPLYILSSRVNDGVCDCCDGTDEYNSGTVCENTCREKGRKEKESLQQLAEVTREGFRLKKILIEEWKTAREEKQSKLLELQAGKKSLEDQVETLRTAKEEAERPEKEAKDQHRKLWEEQQAAAKARREQELAASAFQELDDNMDGLVSLAELQTHPELDTDGDGGLSEEEAQALLSGDTQTDTTSFYDRVWAAIRDKYRSEVPPTDIPVPEVTEPKEEKLPVLPPMEEEEEEEEPEEEEEEEEEEVPGEQPKEVPPPQQPLRPPSPAEDEKMPPYDEETQAIIDAAQEARNKFEEVERSLKEMEESIRSLEQEISFDFGPSGEFAYLYSQCYELTTNEYVYRLCPFKLVSQKPKHGGSPTSLGTWGSWAGPDDDKFSAMKYEQGTGCWQGPNRSTTVRLLCGKETVVTSTTEPSRCEYLMELMTPAACPEPPPEVPTDGDHDEL
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0044877 (protein-containing complex binding)
Biological Process (BP): GO:0008150 (biological process), GO:0065007 (biological regulation), GO:0050789 (regulation of biological process), GO:0048519 (negative regulation of biological process), GO:0050793 (regulation of developmental process), GO:0065008 (regulation of biological quality), GO:0050794 (regulation of cellular process), GO:0051241 (negative regulation of multicellular organismal process), GO:0051239 (regulation of multicellular organismal process), GO:0051093 (negative regulation of developmental process), GO:0048523 (negative regulation of cellular process), GO:0051129 (negative regulation of cellular component organization), GO:0051961 (negative regulation of nervous system development), GO:0045596 (negative regulation of cell differentiation), GO:0050803 (regulation of synapse structure or activity), GO:0051128 (regulation of cellular component organization), GO:0044087 (regulation of cellular component biogenesis), GO:1905809 (negative regulation of synapse organization), GO:0051964 (negative regulation of synapse assembly), GO:0051960 (regulation of nervous system development), GO:0050807 (regulation of synapse organization), GO:1901888 (regulation of cell junction assembly), GO:1901889 (negative regulation of cell junction assembly), GO:0051963 (regulation of synapse assembly)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0016020 (membrane), GO:0005886 (plasma membrane)
Protein: Enzymatic glycosylation-regulating gene protein (A0A8I5ZR94)
Organism: Rattus norvegicus (Rat)
Subcellular location: Golgi apparatus membrane; Single-pass type II membrane protein. Membrane; Single-pass type II membrane protein
InterPro domains:
- IPR003406: Glycosyl transferase, family 14 (family) [123-391]
Sequence:
MLRNLFRRRLFSYPTKYYFMVLVLSLITFSVVRIHQKPEFVSVSHLELSGDDPNSNVNCTKVLQGDPEEIQKVKLEILTVQFKKRPRRTPHDYINMTRDCASFIRTRKYIMEPLTKEEVGFPIAYSIVVHHKIDMLDRLLRAIYMPQNFYCIHVDRKAEESFLAAVQGIASCFDNVFVASQLESVVYASWSRVKADLNCMKDLYRMNANWKYLINLCGMDFPIKTNLEIVRKLKSFTGENSLETEKMPPNKEERWKKRYTVVDGKLTNTGVVKAQPPLKTPLFSGSAYFVVTREYVGYVLENKNIQKFMEWAQDTYSPDEFLWATIQRIPEVPGSLPSSHKYDLSDMNAVARFVKWQYFEGDVSNGAPYPPCSGVHVRSVCVFGVGDLSWMLRKHHFFANKFDMDVDPFALQCLEEHLRHKALETLER
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0016740 (transferase activity), GO:0140096 (catalytic activity, acting on a protein), GO:0016757 (glycosyltransferase activity), GO:0140103 (catalytic activity, acting on a glycoprotein), GO:0016758 (hexosyltransferase activity), GO:0008194 (UDP-glycosyltransferase activity), GO:0008375 (acetylglucosaminyltransferase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0009719 (response to endogenous stimulus), GO:0042221 (response to chemical), GO:1901698 (response to nitrogen compound), GO:0010033 (response to organic substance), GO:0009725 (response to hormone), GO:1901700 (response to oxygen-containing compound), GO:0043434 (response to peptide hormone), GO:1901652 (response to peptide), GO:0010243 (response to organonitrogen compound), GO:0032868 (response to insulin)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005576 (extracellular region), GO:0005615 (extracellular space)
Protein: Synaptophysin-like 1 (A0A9K3Y7R4)
Organism: Rattus norvegicus (Rat)
Subcellular location: Membrane; Multi- pass membrane protein
InterPro domains:
- IPR008253: Marvel domain (domain) [28-236]
- IPR001285: Synaptophysin/synaptoporin (family) [9-258]
Sequence:
MASKAYLIRQRFSRLSQRMSTFQINLNPLKEPLGFIKILEWFASIFAFATCGGFKGKTEIQVNCLSAPGENKTITATFGYPFRLNQASFHSAPNVNVCKVNWEKHVLIGDYSSSAQFYVTFAVLVFLYCIAALLLYVGYTNLYRDSRKLPMIDFIVTLVATFLWLVSSSAWAKALTDIKVATGHRIVEELDPCKSEVSCYFVSVTSMGSLNVSVIFGFLNMILWGGNAWFVYKETSLHSPSNTSASHGQGGVPPTSGM
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0050789 (regulation of biological process), GO:0065007 (biological regulation), GO:0048518 (positive regulation of biological process), GO:0045927 (positive regulation of growth), GO:0048522 (positive regulation of cellular process), GO:0040008 (regulation of growth), GO:0050794 (regulation of cellular process), GO:0051128 (regulation of cellular component organization), GO:0001558 (regulation of cell growth), GO:0030307 (positive regulation of cell growth)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0016020 (membrane), GO:0098793 (presynapse), GO:0005737 (cytoplasm), GO:0012505 (endomembrane system), GO:0030054 (cell junction), GO:0031090 (organelle membrane), GO:0008021 (synaptic vesicle), GO:0031410 (cytoplasmic vesicle), GO:0043229 (intracellular organelle), GO:0045202 (synapse), GO:0043227 (membrane-bounded organelle), GO:0030133 (transport vesicle), GO:0070382 (exocytic vesicle), GO:0030672 (synaptic vesicle membrane), GO:0030658 (transport vesicle membrane), GO:0099503 (secretory vesicle), GO:0043231 (intracellular membrane-bounded organelle), GO:0098588 (bounding membrane of organelle), GO:0031982 (vesicle), GO:0012506 (vesicle membrane), GO:0030659 (cytoplasmic vesicle membrane), GO:0099501 (exocytic vesicle membrane), GO:0097708 (intracellular vesicle)
Protein: Sperm acrosome developmental regulator (F6VXN4)
Organism: Mus musculus (Mouse)
InterPro domains:
- IPR042553: TSC22 domain family protein 4 (family) [9-95]
- IPR047862: TSC22/Bun, conserved site (conserved_site) [27-43]
- IPR000580: TSC22/Bun (family) [27-81]
Sequence:
GRVYISQTSNRGSGSLVGIDNKIEQAMDLVKSHLMFAVREEVEVLKEQIRDLAERNAALEQENGLLRALASPEQLAQLPSSGLPRLGPSAPNGPSI
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0065007 (biological regulation), GO:0050896 (response to stimulus), GO:0050789 (regulation of biological process), GO:0048519 (negative regulation of biological process), GO:0009628 (response to abiotic stimulus), GO:0002682 (regulation of immune system process), GO:0006950 (response to stress), GO:0048523 (negative regulation of cellular process), GO:0002683 (negative regulation of immune system process), GO:0050794 (regulation of cellular process), GO:0006970 (response to osmotic stress), GO:0060548 (negative regulation of cell death), GO:0010941 (regulation of cell death), GO:0043069 (negative regulation of programmed cell death), GO:0043067 (regulation of programmed cell death), GO:0043066 (negative regulation of apoptotic process), GO:0042981 (regulation of apoptotic process), GO:2000107 (negative regulation of leukocyte apoptotic process), GO:2000106 (regulation of leukocyte apoptotic process), GO:0070228 (regulation of lymphocyte apoptotic process), GO:0070229 (negative regulation of lymphocyte apoptotic process), GO:0070232 (regulation of T cell apoptotic process), GO:0070233 (negative regulation of T cell apoptotic process)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Sperm acrosome developmental regulator (D3YZZ4)
Organism: Mus musculus (Mouse)
InterPro domains:
- IPR000580: TSC22/Bun (family) [99-153]
- IPR047862: TSC22/Bun, conserved site (conserved_site) [99-115]
Sequence:
MSQPGVSVKSLVSSYEMRVVGMAPGAPRKRGCVSSPCSPRGSSPIRGVSGPPAHQGLGGPGHRPSSHCGMDKSLLPLILYCHSGSGSLVGIDNKIEQAMDLVKSHLMFAVREEVEVLKEQIRDLAERNAALEQENGLLRALASPEQLAQLPSSGLPRLGPSAPNGPSI
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0065007 (biological regulation), GO:0050896 (response to stimulus), GO:0050789 (regulation of biological process), GO:0048519 (negative regulation of biological process), GO:0009628 (response to abiotic stimulus), GO:0002682 (regulation of immune system process), GO:0006950 (response to stress), GO:0048523 (negative regulation of cellular process), GO:0002683 (negative regulation of immune system process), GO:0050794 (regulation of cellular process), GO:0006970 (response to osmotic stress), GO:0060548 (negative regulation of cell death), GO:0010941 (regulation of cell death), GO:0043069 (negative regulation of programmed cell death), GO:0043067 (regulation of programmed cell death), GO:0043066 (negative regulation of apoptotic process), GO:0042981 (regulation of apoptotic process), GO:2000107 (negative regulation of leukocyte apoptotic process), GO:2000106 (regulation of leukocyte apoptotic process), GO:0070228 (regulation of lymphocyte apoptotic process), GO:0070229 (negative regulation of lymphocyte apoptotic process), GO:0070232 (regulation of T cell apoptotic process), GO:0070233 (negative regulation of T cell apoptotic process)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Enhancer of polycomb homolog 1 (Drosophila) (Predicted) (A6K9H9)
Organism: Rattus norvegicus (Rat)
InterPro domains:
- IPR024943: Enhancer of polycomb protein (family) [2-733]
- IPR009607: Enhancer of polycomb, C-terminal (domain) [531-762]
Sequence:
MEHHLQRAISAQQVYGEKRDNMVIPVPEAESNIAYYESIYPGEFKMPKQLIHIQPFSLDAEQPDYDLDSEDEVFVNKLKKKMDICPVQFEEMIDRLEKGSGQQPVSLQEAKLLLKEDDELIREVYEYWIKKRKTCRGPSLIPSVKQEKRDGSSTNDPYVAFRRRTEKMQTRKNRKNDEASYEKMLKLRRDLSRAVTILEMIKRREKSKRELLHLTLEIMEKRYNLGDYSGEIMSEVMAQRQPVKPTYAIPIIPITNSSQFKHQDVTDAKEFKVNKQDKADLIRPKRKYEKKPKVLPSSAAAPQQPSPAALPGFSAKDLNQYDFPSSDEEPLSQVLSGSSEAEEENDPDGPFAFRRKAGCQYYAPHLDQTGNWPWTSPKDGGLGDVRYRYCLTTLTVPQRCLGFARRRVGRGGRVLLDRAHSDYDSMFHHLDLDMLSSPQPSPVNQFANTSETNTSDRPSSKDLSQILVDIKSCRWRHFRPRTPSLPDSDSGELSSRKLHRSISRAGPAQPGAHTCSASTQSRSSSGSTHCAFTAEQYQQHQQQLALMQQQQLAQTQQQQANSSSSTAAPQGFVSKTLDSASAQFAASALMTSEQLMGFKMKDDVVLGIGVNGVLPASGVYKGLHLSSTTPTALVHTSPSTAGSTLLQPSNITQTSGSHSALSHQVTAANSATTQVLFGNNIRLTVPSSVPTVNSIAPINARHIPRTLSAVPPSALKLAAAANCQVSKVPSSSSVDSVPRENHESEKPALNNIADNTVAMEVT
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0009987 (cellular process), GO:0032501 (multicellular organismal process), GO:0048869 (cellular developmental process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0030154 (cell differentiation), GO:0061061 (muscle structure development), GO:0048731 (system development), GO:0042692 (muscle cell differentiation), GO:0001944 (vasculature development), GO:0072359 (circulatory system development), GO:0035886 (vascular associated smooth muscle cell differentiation), GO:0051145 (smooth muscle cell differentiation)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Interleukin 5 receptor, alpha (A6IBK1)
Organism: Rattus norvegicus (Rat)
Subcellular location: Membrane; Single- pass type I membrane protein
InterPro domains:
- IPR013783: Immunoglobulin-like fold (homologous_superfamily) [16-330]
- IPR015321: Type I cytokine receptor, cytokine-binding domain (domain) [126-231]
- IPR003532: Short hematopoietin receptor, family 2, conserved site (conserved_site) [148-177]
- IPR036116: Fibronectin type III superfamily (homologous_superfamily) [29-326]
Sequence:
MVPVLLILMGASATLHADLLSPEKFLLLPPVNFTIKATGLAQVLLHWDPNPDQAPVDLEYHVKINVPQEDEYDTKNTESKCVTPLHEGFAASVRTILKSIHSPLASSWVSAELKAPPGSSGTSVMNLTCTTNTVKSSHTHFRPYQVSLRCTWLVGKDAPEDTQYFLYYRFSVWTEECQEYSKDALNRNIACWFPRTFINSKGFEQLAVHINGSSKHAAIKPLDQLFTLYAIDQVNPPMNVTVEIENNSLYIQWGKPLSAFPVHCFKYKLKIYNTKNGYSQMENLVTNKFISKIDDVSTYSIQVRAAVSSPCRMSGSWGEWSQPIYVGKKKKPLVEWHLIVLPTAICFILLIFSLICRVYHLWTRLFPPVPAPKSSIKDLPVVTEYEKPPWNETKIEIVHFVEEDGFEVMENSMF
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0060089 (molecular transducer activity), GO:0038023 (signaling receptor activity), GO:0140375 (immune receptor activity), GO:0004888 (transmembrane signaling receptor activity), GO:0004896 (cytokine receptor activity)
Biological Process (BP): GO:0008150 (biological process), GO:0002376 (immune system process), GO:0009987 (cellular process), GO:0065007 (biological regulation), GO:0050896 (response to stimulus), GO:0050789 (regulation of biological process), GO:0051716 (cellular response to stimulus), GO:0051239 (regulation of multicellular organismal process), GO:0006950 (response to stress), GO:0042221 (response to chemical), GO:0019222 (regulation of metabolic process), GO:0006955 (immune response), GO:0006952 (defense response), GO:0060255 (regulation of macromolecule metabolic process), GO:0002437 (inflammatory response to antigenic stimulus), GO:0001817 (regulation of cytokine production), GO:0010033 (response to organic substance), GO:0070887 (cellular response to chemical stimulus), GO:0006954 (inflammatory response), GO:0071310 (cellular response to organic substance), GO:0010468 (regulation of gene expression), GO:0032674 (regulation of interleukin-5 production)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005576 (extracellular region), GO:0005615 (extracellular space)
Protein: Similar to forkhead protein AFXH (Predicted) (A6IQA5)
Organism: Rattus norvegicus (Rat)
Subcellular location: Nucleus
InterPro domains:
- IPR036390: Winged helix DNA-binding domain superfamily (homologous_superfamily) [97-183]
- IPR001766: Fork head domain (domain) [99-195]
- IPR030456: Fork head domain conserved site 2 (conserved_site) [150-156]
- IPR047409: Forkhead box protein O4, forkhead domain (domain) [98-183]
- IPR032067: FOXO protein, transactivation domain (domain) [464-503]
- IPR036388: Winged helix-like DNA-binding domain superfamily (homologous_superfamily) [97-187]
Sequence:
MEPENKKSATEAAAIIDLDPDFEPQSRPRSCTWPLPRPELATEPPEPSEVEPSLGQKVPTEGHSEPTLLPSRLPEPAGGPQPEILGAVTGPRKGGSRRNAWGNQSYAELISQAIESAPEKRLTLAQIYEWMVRTVPYFKDKGDSNSSAGWKNSIRHNLSLHSKFIKVHNEATGKSSWWMLNPDGGKGGKAPRRRAASMDSSSKLLRGRSKGPKKKPSVLPAPPEGATPRSPLGHFAKWSSSPCPRNREEADVWTTFRPRSSSNASTVSTRLSPMRPESEVLAEEEMPASASSYAGGVPPTLSEDLELLDGLNLASPHSLLSRSNLSSFSLQHPGLAGPLHSYGASLFGPIDGSLSAGEGCFSSSQSLEALLTSDTPPPPADVLMTQVDPILSQAPTLLLLGGMPSSSKLATGVSLCPTPLEGPGPSNLVPTLSVMAPPPVMPGAPIPKVLGTPVLASPTEDFSHDRMPQDLDLDMYMENLECDMDNIISDLMDGEGLDFNFEPDP
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0003682 (chromatin binding), GO:0005515 (protein binding), GO:1990841 (promoter-specific chromatin binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0065007 (biological regulation), GO:0048518 (positive regulation of biological process), GO:0050896 (response to stimulus), GO:0050789 (regulation of biological process), GO:0009605 (response to external stimulus), GO:0006950 (response to stress), GO:0007568 (aging), GO:0040017 (positive regulation of locomotion), GO:0040012 (regulation of locomotion), GO:0050794 (regulation of cellular process), GO:0048522 (positive regulation of cellular process), GO:0009991 (response to extracellular stimulus), GO:2000145 (regulation of cell motility), GO:2000147 (positive regulation of cell motility), GO:0035902 (response to immobilization stress), GO:0030335 (positive regulation of cell migration), GO:0030334 (regulation of cell migration), GO:0031667 (response to nutrient levels), GO:0014910 (regulation of smooth muscle cell migration), GO:0014911 (positive regulation of smooth muscle cell migration)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005829 (cytosol), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: RCG39153 (A6JY10)
Organism: Rattus norvegicus (Rat)
InterPro domains:
- IPR021190: Peptidase M10A (family) [20-559]
- IPR024079: Metallopeptidase, catalytic domain superfamily (homologous_superfamily) [35-307]
- IPR033739: Peptidase M10A, catalytic domain (domain) [135-300]
- IPR036375: Hemopexin-like domain superfamily (homologous_superfamily) [358-557]
- IPR036365: PGBD-like superfamily (homologous_superfamily) [40-112]
- IPR018487: Hemopexin-like repeats (repeat) [363-555]
- IPR001818: Peptidase M10, metallopeptidase (domain) [134-300]
- IPR000585: Hemopexin-like domain (domain) [363-555]
- IPR021805: Peptidase M10A, matrix metallopeptidase, C-terminal (domain) [588-657]
- IPR021158: Peptidase M10A, cysteine switch, zinc binding site (binding_site) [105-112]
- IPR002477: Peptidoglycan binding-like (domain) [43-102]
- IPR018486: Hemopexin, conserved site (conserved_site) [404-419]
- IPR006026: Peptidase, metallopeptidase (domain) [131-301]
Sequence:
MGSDRSALGRPGCAGSCLSSRASLLLLLLVLLDCLGGGTASEDAEVYAAENWLRLYGYLPQPSRHMSTMRSAQILASALAEMQSFYGIPVTGVLDEETKTWMKRPRCGVPDQFGVRVKANLRRRRRRYTLTGKTWSNYHLTFSIQNYTEKLGWYNSMEAVRRAFQVWEQVTPLVFQEVPYDDIRLRRRAEADIMVLFASGFHGDSSPFDGVGGFLAHAYFPGPGLGGDTHFDADEPWTFSSTDLHGISLFLVAVHELGHALGLEHSSNPSAIMAPFYQWMDTDNFQLPEDDLRGIQQLYGSPDGKPQPTRPLPTVRPRRPGRPDHQPPRPPQPPHPGGKPERPPKPGPPPQPRATERPDQYGPNICDGNFDTVAVLRGEMFVFKGRWFWRVRHNRVLDNYPMPIGHFWRGLPGNISAAYERQDGHFVFFKGNRYWLFREANLEPGYPQPLSSYGTDIPYDRIDTAIWWEPTGHTFFFQADRYWRFNEETQHGDPGYPKPISVWQGIPNSPKGAFLSNDAAYTYFYKGTKYWKFNNERLRMEPGHPKSILRDFMGCQEHVEPRSRWPDVARPPFNPNGGAEPETEDDSKEEDVGDKDEGSRVVVQMEEVVRTVNVVMVLVPLLLLLCILGLAFALVQMQRKGAPRMLLYCKRSLQEWV
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0044877 (protein-containing complex binding), GO:0005515 (protein binding), GO:0005102 (signaling receptor binding), GO:0050839 (cell adhesion molecule binding), GO:0005178 (integrin binding)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0042221 (response to chemical), GO:0010033 (response to organic substance), GO:1901700 (response to oxygen-containing compound), GO:0032355 (response to estradiol), GO:0033993 (response to lipid), GO:0014070 (response to organic cyclic compound)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0016020 (membrane)
Protein: T-box transcription factor T (A6KK19)
Organism: Rattus norvegicus (Rat)
Subcellular location: Nucleus
InterPro domains:
- IPR046360: T-box transcription factor, DNA-binding domain (domain) [41-224]
- IPR001699: T-box transcription factor (family) [24-400]
- IPR018186: Transcription factor, T-box, conserved site (conserved_site) [51-143]
- IPR002070: Transcription factor, Brachyury (family) [19-291]
- IPR008967: p53-like transcription factor, DNA-binding domain superfamily (homologous_superfamily) [42-223]
- IPR036960: T-box superfamily (homologous_superfamily) [40-230]
Sequence:
MSSPGTESAGKSLQYRVDHLLSAVESELQAGSEKGDPTERELRVGLEESELWLRFKELTNEMIVTKNGRRMFPVLKVNVSGLDPNAMYSFLLDFVAADNHRWKYVNGEWVPGGKPEPQAPSCVYIHPDSPNFGAHWMKAPVSFSKVKLTNKLNGGGQIMLNSLHKYEPRIHIVRVGGPQRMITSHCFPETQFIAVTAYQNEEITALKIKYNPFAKAFLDAKERNDHKDVMEEPGDCQQPGYSQWGWLVPGAGTLCPPASSHPQFGGSLSLPSTHGCERYPTLRNHRSSPYPSPYAHRNNSPTYADNSSACLSMLQSHDNWSSLGVPAHTSMLPVSHNASPPTGSSQYPSLWSVSNGTITPGSQTAGVSNGLGAQFFRGSPAHYAPLTHTVSAATSSSSGSPMYEGAATVTDISDSQYDTAQSLLIASWTPVSPPSL
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0009987 (cellular process), GO:0051716 (cellular response to stimulus), GO:0042221 (response to chemical), GO:0010033 (response to organic substance), GO:1901700 (response to oxygen-containing compound), GO:0070887 (cellular response to chemical stimulus), GO:1901701 (cellular response to oxygen-containing compound), GO:0071310 (cellular response to organic substance), GO:0033993 (response to lipid), GO:0032526 (response to retinoic acid), GO:0071300 (cellular response to retinoic acid), GO:0071396 (cellular response to lipid)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0000785 (chromatin), GO:0005737 (cytoplasm), GO:0031974 (membrane-enclosed lumen), GO:0005654 (nucleoplasm), GO:0043233 (organelle lumen), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043228 (non-membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0070013 (intracellular organelle lumen), GO:0043232 (intracellular non-membrane-bounded organelle), GO:0031981 (nuclear lumen), GO:0005694 (chromosome), GO:0005634 (nucleus)