Protein: Nucleosome-remodeling factor subunit BPTF isoform X4 (A0A8M3B0X4)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR028941: WHIM2 domain (domain) [413-478]
- IPR001510: Zinc finger, PARP-type (domain) [2696-2798]
- IPR019786: Zinc finger, PHD-type, conserved site (conserved_site) [350-391]
- IPR001487: Bromodomain (domain) [2779-2887]
- IPR038028: Nucleosome-remodeling factor subunit BPTF (family) [1-2889]
- IPR019787: Zinc finger, PHD-finger (domain) [347-2772]
- IPR001965: Zinc finger, PHD-type (domain) [349-2770]
- IPR036427: Bromodomain-like superfamily (homologous_superfamily) [2779-2887]
- IPR018501: DDT domain (domain) [197-257]
- IPR013083: Zinc finger, RING/FYVE/PHD-type (homologous_superfamily) [340-2778]
- IPR018359: Bromodomain, conserved site (conserved_site) [2803-2860]
- IPR011011: Zinc finger, FYVE/PHD-type (homologous_superfamily) [336-2772]
Sequence:
MRGRRGRPPKAQLVQEPSTGPVRGLRPRRSLKPKVKGGSDEDYVTPKRGTHHHSTRGRRKARSTASRGRGRGRGTARGRGRRSTASGVVYDDHESDEDDEDAVSLRSEEDEYIEEPLTDEEEEEEEEEAINDESDYLEELDELDEDDASYCTESSHGSNTVGRKRPRPRRPPSPILEQKEIPLLELPNSSEDLLLPNEQLLNALAIYEVLRSFCTVLRLSPFRFEDFCAALVGQEQCTLMAETHICLLKAILREEDTSNTTFGPADLKDSVNSTLYFIDGMTWPEVVRSYCESDPEYHHVLPDLEGEDYPFSPLESKIKVLQFLVDQFLTTNLAREELMSEGVIQYDDHCRVCHRLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEICVAHKVPGVTDCLTEFQKSRPYIRQEPIGFDRHQRKYWFLNRRVVVEEDGEDDSKQIWYYSTKVQLGELLELLDKGFWENDLCSVLEEMREEIHAHMDITEELTNKARGNNKAYLTVANDVILDRLKTKQEAELEEVKRRAAEEAERAKLEPKTLSDEPASGDQMSSNDSCPQQDSSNGNARNEQTSSDASVSAVPVGEVLSSSVPEIAASSSSTVQTKPDSQSPIGNAVTSSSSGEEKGEGTDGVEELTGKSSEGACHGEGDSVLEAELAQTADENSCSSHFSISECLRGPDEPDLVDRSSQSSLNSQDDTGDGKANGDSTKTASSRMITRLRNPDSKLSQRKVMQDKDGSSQDGSRALKETPPLSSFGTFKRDSSKSSGFFKLGQEGKFRVYHNQYSTNTLALNKHQHREDHDKRRHLSHKLCMTPAGEFKWNGSLYGSKALTVSTLRLTIIQLENNIPAPFLHPNWASHRSNWIKAVQMCSKAREFALALAILECAIKPVVMLPVWKDSLGHTRLHRMTSVEREEKEKVKKREKKLEDEETMQQATWVKYTFPIKHQVWKQKGEEYRVTGYGGWSWVSKTHVHRFFTKLPGNTNVNYRKALEAAKTGMDNQAALPGAPKTVVKKDEMSSQNVPDKDNAQVLSLDSSEEKLSVEKDHVLKVEEQDEEKMNETTEEKCNEKNESVEEMDTSSPNSANEGKVEITNASTDDSTMKEEPLDSEVVKDNTLNQPQQCFWHDVVNVSEGFLQRTAYKKLKPSKLDGLLERRVKQFTIEEKQRIDKLKQAPTSKPLTETAVENKETTLAAQDHKVKIEGTISETPKARQTEGVACLAIQEKDNVVKRLVFNQEDEQAKTNTSGQKNTLDVRLNDSVELAPKENQQKLAETDPKTASRVAMSELNGNSQSLDQSLSLNAKPDKNITEATCPPEDSAGKDNIENSENDLDVKKTVPVQVNGKDVTVDPECKNLTDNGDTKELTNTIVEDIKAISPKEPVKSLMNGDATQECLKEWTNSTIPQVNLDEEKAVTKLDPDYPPPQKVAKLENNIEKPIDSSVSLSVPEPSPVASEPNERSEVPSHSSKVEPMQVVEAKPSVPSPVPSAEESSLSSDLTENSSSIGETTVVTQVTTTTTTVSTESRMVLTSRDSLASKNGLNTAVLTDSKVESSSSVSTLSSTTTTTVTKVLSSSQEATLTTECKTMVMKTLTDTTSSPSGSTVKSMTVSHEYSTRDRVRLLKFSRTKKTRSGTALPSYRKFVTKSSKKSIFVLPNDELKKLARRGGIREVPIFNYNAKPALDIWPYPSPRPTFGITWRYRLQTVRSLAGVSLMLRLLWACLRWDDMSVKPSPTGGTTRTETSDTDITTTEIIKRRDVGPYGIRSEYCIRKIICPLGVPETPKETPTPQRKGLRSSALRPKKPEPAKQTGPVVIETWVAEEDLELWEIRAFTERVEREKAQAADPTKVSVQKKAEEVKAQLEAQLKQQRLAAQQKRLEQQKPSTTSNTTTLTSTPTTPGTTTQKVVVGSISGQVTSTPKVVMTTKLGSPVTFQQNKNFQQSFASWVKQGQQGNSVSTSSVVTVAASSATTSGQTFHIAAAPGSMAGSVIAAKLPVPANSKIVTVNVPTTQGGLVQVQQKVVGIIPSSTAGNAQSFPPFQPRTATINIRPNTTTSTQQVLTTGTTLRPGMTVIRSPLQQATTLGKTIIRTPLMVQQGQTQQQVQTSSGTQVVGTPPRLPTPNQPQTPQTPASPRPQQGQVKLTLAQLTQLTQGAQGGNQGLTVVIQGQGQTTGQLQVIPQGVTVIPGPGQQLMQAAMPNGQVQRFLFTPMAPAPTPAPAPVSAPAAPSNTTPSSVPPAAAPTAVTSTTPAPIQTAARLAPQPQPPPSLPPPPSVPPSQPVQHTPAPIQTAVIPQPTPPIQPHPPVQLRPQPQLPPQNPVVPPTPVSTPQIAQVTATAPPQQITTLPVTQTTVTKVQPQIQLPPQLLSVPGLQQQVLSHIQSQVAAQIQAQVGTTAGMPQQIKLQLPIQIQQQGGGQVQAHQIQNLVTIQTASVQEQLQRIQQLCEQQQQKKKQQEAKREQAQQHVSQSDLIQKQVAQKQNVAIEQLKQKKTMTPAEREENQRMIVCNQVMKFILDKIDKDERQAAKKRKREESVEQKRSKQNASKLSALLFKHKEQLKADILKKRALLDKELQLQVQEELKRDLIKLRREKEKAQAAAAQAAAAAAAAAAASTHVHSGLSSYTGTVTSPTSTHKRKREEERDAAKPKRKKMISTTSKDSKRDIKLYCICKTPYDESKFYIGCDLCSNWYHGECVGITEKEAKKMDDYICSECKRAQEGNTEELYCICRTPYDESQFYIGCDRCQNWYHGRCVGILQSEATHIDEYVCPQCQSTEDAMTVLTPLTDKDYEGLKRILRSLQSHKMAWPFLEPVDPNDAPDYYGIIKEPMDLSTMEERIQKRFYSKLTEFVADMTKIFDNCRYYNPSDSPFYQCAEFLESFFVQKLKAFKASRLS
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:1901363 (heterocyclic compound binding), GO:0097159 (organic cyclic compound binding), GO:0005515 (protein binding), GO:0003676 (nucleic acid binding), GO:0001067 (transcription regulatory region nucleic acid binding), GO:0003677 (DNA binding), GO:0003690 (double-stranded DNA binding), GO:0043565 (sequence-specific DNA binding), GO:0000976 (transcription cis-regulatory region binding), GO:1990837 (sequence-specific double-stranded DNA binding), GO:0000987 (cis-regulatory region sequence-specific DNA binding), GO:0000977 (RNA polymerase II transcription regulatory region sequence-specific DNA binding), GO:0000978 (RNA polymerase II cis-regulatory region sequence-specific DNA binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0065007 (biological regulation), GO:0050789 (regulation of biological process), GO:0032501 (multicellular organismal process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0019222 (regulation of metabolic process), GO:0007389 (pattern specification process), GO:0050794 (regulation of cellular process), GO:0060255 (regulation of macromolecule metabolic process), GO:0031323 (regulation of cellular metabolic process), GO:0080090 (regulation of primary metabolic process), GO:0060896 (neural plate pattern specification), GO:0003002 (regionalization), GO:0009889 (regulation of biosynthetic process), GO:0051171 (regulation of nitrogen compound metabolic process), GO:0019219 (regulation of nucleobase-containing compound metabolic process), GO:0060897 (neural plate regionalization), GO:0051252 (regulation of RNA metabolic process), GO:0010556 (regulation of macromolecule biosynthetic process), GO:0009952 (anterior/posterior pattern specification), GO:0010468 (regulation of gene expression), GO:0031326 (regulation of cellular biosynthetic process), GO:2001141 (regulation of RNA biosynthetic process), GO:0006355 (regulation of DNA-templated transcription), GO:1903506 (regulation of nucleic acid-templated transcription), GO:0006357 (regulation of transcription by RNA polymerase II)
Cellular Component (CC): GO:0005575 (cellular component), GO:0032991 (protein-containing complex), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0000785 (chromatin), GO:1902494 (catalytic complex), GO:0140513 (nuclear protein-containing complex), GO:0070603 (SWI/SNF superfamily-type complex), GO:0043229 (intracellular organelle), GO:1904949 (ATPase complex), GO:0043227 (membrane-bounded organelle), GO:0043228 (non-membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0043232 (intracellular non-membrane-bounded organelle), GO:0031010 (ISWI-type complex), GO:0005694 (chromosome), GO:0005634 (nucleus)