lokahq/bioreason-rl huggingface dataset:
Protein: Condensin complex subunit 2 (A0A8M9PKI5)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Function: Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes
Subcellular location: Chromosome. Cytoplasm
InterPro domains:
Sequence:
MSAFSTPTARQRQWSSPALGHKAALSTTSTPLLDNIQGNDDEQERRQRRRSRVIDLHGVNDSSINEAGTHSSAGTPAAVPKLSSAQISEHYSTCIKLSTENKITTKNAFGLHLIDYMADILKEKDSELNFKVAAGTLDASTKIYAVRVDAVHADAYRVLGGLGSETKPKESQDGDDETEAAEGSQGEQVAAKQTKKRPPKKTVEQNLSNINLSESEMKCEVDPMFQRMAASFDENSTAGVFLSVLFSEDSCCELRFPSHMTLLKSQLPPVQVSHQNVPASPFTGHLKTLEDRPICPSLEDFSFTRWTPEQTTNLNQLLEKMKQGEHAFDVNADIEPDEDDAPDFGDNFDADVDEGRPGDNEEFKEHKEACSKSPQNGRGVIPIGEVDIATMCLQLSDQPREYSYFSPRTMATWVGPGYWLFKPGHKQDQKPDKEPRKRAPKNPLIIDFKADINFHNYFKTTRAATTISKSALNTSNKKTTLPADFQYPPSNLSQLNLKPSNTLSAEGKKRLSGELSEDIGEYNYNNANDTANFCPGLQEGDSEDAEGFAGSDDSQTDRPTPFSLDTDDISTYGEDCLVPEPHKLNIIEINYARTAKKMDMKKLKTTMWGLLTESPEKTAKQVESEDTTEVPGEKSFSQSIRNLVQRLPSAMATNLSVPLAFVALLHLANEKNLELHKIDGMTDIIIKQGH
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0009987 (cellular process), GO:0071840 (cellular component organization or biogenesis), GO:0022402 (cell cycle process), GO:0007049 (cell cycle), GO:0016043 (cellular component organization), GO:0007059 (chromosome segregation), GO:1903047 (mitotic cell cycle process), GO:0000278 (mitotic cell cycle), GO:0098813 (nuclear chromosome segregation), GO:0007076 (mitotic chromosome condensation), GO:0006996 (organelle organization), GO:0000070 (mitotic sister chromatid segregation), GO:0140014 (mitotic nuclear division), GO:0048285 (organelle fission), GO:0000819 (sister chromatid segregation), GO:0051276 (chromosome organization), GO:0030261 (chromosome condensation), GO:0000280 (nuclear division)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0043229 (intracellular organelle), GO:0043228 (non-membrane-bounded organelle), GO:0043232 (intracellular non-membrane-bounded organelle), GO:0005694 (chromosome)
Protein: Neurotrimin isoform X1 (A0A8M9QGP0)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Cell membrane; Lipid-anchor, GPI-anchor. Membrane; Lipid-anchor, GPI-anchor
InterPro domains:
Sequence:
MKMVVCGCWRRCVVMGLRLLFLLPAGLPVRSQGESQSDNKQMDNITIRQGETLFLSCSQGDFVTHTAWLNRSSILYAGEDKWSVDPRVSLVTLSQEEFTIKIEDVDVTDEGQYICAVQTSSRPRTTSVHIIVQVPPKIVNLSRDLVVNEGSNVTLMCLANGKPEPAIVWRMKSPSDDSLSSDSEVLDIPFISRYRAGVYECTAANDIAVDTQTVELTVNYAPSVSDGRDVGVTLGQRGVLQCEADAVPEADFEWYRDDRRIFNGLDGIEIEAAGALSRLTFFNVSEADYGNYTCVAINKLGSANTSFVLYEIIEPTSSTLLQVETSPSVLEMTSSDLEQTPLQNDLWEGPGAVQDGNSGTSTVFNPFCLLIAILQLLLKF
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding), GO:0042802 (identical protein binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0009987 (cellular process), GO:0032501 (multicellular organismal process), GO:0008037 (cell recognition), GO:0048869 (cellular developmental process), GO:0048856 (anatomical structure development), GO:0071840 (cellular component organization or biogenesis), GO:0007275 (multicellular organism development), GO:0007155 (cell adhesion), GO:0008038 (neuron recognition), GO:0048468 (cell development), GO:0030154 (cell differentiation), GO:0048731 (system development), GO:0022008 (neurogenesis), GO:0030030 (cell projection organization), GO:0007413 (axonal fasciculation), GO:0007399 (nervous system development), GO:0030182 (neuron differentiation), GO:0048666 (neuron development), GO:0031175 (neuron projection development), GO:0048699 (generation of neurons), GO:0120036 (plasma membrane bounded cell projection organization), GO:0106030 (neuron projection fasciculation), GO:0061564 (axon development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0071944 (cell periphery), GO:0030312 (external encapsulating structure), GO:0031012 (extracellular matrix), GO:0062023 (collagen-containing extracellular matrix)
Protein: arginine--tRNA ligase (A0A8M3AVZ0)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR014729: Rossmann-like alpha/beta/alpha sandwich fold (homologous_superfamily) [123-455]
- IPR009080: Aminoacyl-tRNA synthetase, class Ia, anticodon-binding (homologous_superfamily) [458-577]
- IPR008909: DALR anticodon binding (domain) [463-577]
- IPR001278: Arginine-tRNA ligase (family) [33-577]
- IPR001412: Aminoacyl-tRNA synthetase, class I, conserved site (conserved_site) [134-145]
- IPR035684: Arginyl-tRNA synthetase, catalytic core domain (domain) [126-449]
Sequence:
MACFFRRSAALQLAKACGQNEETLIPLISVAPVNKKQSVADLRVSVSHLLQSGAVRPDGDLQNTTHTLARQIRTDAVVEEVIPGRGVIHFRLNKLLLAQKLLDQLRSDPDGFGVKSEILRRLRVGRTLVEFSSPNIAKKFHAGHLRSTIIGNFIANLKKALGNEVIRVNYLGDWGMQFGLLGSGFERFGSQEKLRTQPLEHLFEVYVQVNREAESDASVRSAAAHFFRRLEQSEEQALELWRHFREITIHEYKRIYQRLGVEFDHYSGESFHRAETQTVLDELRSRRLLKTSQKGTGVVDLSDKGDMSNYATLVRSDGTSLYITRDVAAALDRKQRFSFDEMIYVTDKSQTMHFQQLFRILQAMGHPWAGSCHHVAFGLVQGMSTRRGEVLFLEDVLEEAQSRMIHNMRQSRTSKELEDPEVTAERIGISALIVQDFKGPLISDYRFEWDKVLQAQGDTGVFLQYTHARLCSLLRQQDCEISCSDFSPLTDSRSVSLLQHLLRYDEVLLQCATDLQPKHLVNFLMTLSHLVASAHRELPVKGSSEAVAQARLCLFSSVRSVLANGMRILGITPVDKM
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0016874 (ligase activity), GO:0140640 (catalytic activity, acting on a nucleic acid), GO:0140098 (catalytic activity, acting on RNA), GO:0016875 (ligase activity, forming carbon-oxygen bonds), GO:0004812 (aminoacyl-tRNA ligase activity), GO:0140101 (catalytic activity, acting on a tRNA)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0032501 (multicellular organismal process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0009653 (anatomical structure morphogenesis), GO:0060322 (head development), GO:0009887 (animal organ morphogenesis), GO:0048731 (system development), GO:0048513 (animal organ development), GO:0007420 (brain development), GO:0007417 (central nervous system development), GO:0048854 (brain morphogenesis), GO:0007399 (nervous system development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0043229 (intracellular organelle), GO:0005739 (mitochondrion), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle)
Protein: Homeodomain interacting protein kinase 3a isoform X3 (A0A8M9PMR8)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR008271: Serine/threonine-protein kinase, active site (active_site) [354-366]
- IPR000719: Protein kinase domain (domain) [233-561]
- IPR050494: Serine/threonine and dual-specificity kinase (family) [131-564]
- IPR017441: Protein kinase, ATP binding site (binding_site) [239-262]
- IPR011009: Protein kinase-like domain superfamily (homologous_superfamily) [227-575]
Sequence:
MASQVTVCPPHVYQPQTSAFCRAKKIDPSSCVYHEKIPRTYVVGVNLGIAHPTDIIPLLRFEALTSEKPCPARNFSKQTESAPQELLRRASSPYNRVASEGKLQYFSKAEVGVEEKSGDSGQNSQGSSRSSGGAPEGVRRKERSGGLNSDEGTQKCGFKCKGQEIENSKSIMQIVEEHSTLPAMLPTNVGSTTAVGVAPPEQKGTGTGAVNGTGDGDYQLVQHEVLCSMKHTYEVLEFLGRGTFGQVVKCWKRGTNEIVAVKILKNHPSYARQGQIEVSILARLSGENAEEHNLVRAFECFQHRSHTCLVFEMLEQNLYDFLKQNKFSPLPLKVIRPVLQQVATALKKLKSLGLIHADLKPENIMLVDPVRQPFRVKVIDFGSASHVSKAVCSTYLQSRYYRAPEIILGLPFCEAIDMWSLGCVIAELFLGWPLYPGALEYDQIRYISQTQGLPGEQLLNVGTKTARFFCKESDSPYTAWRLKTTEEHEAETGLKSKEARKYIFSCLDDIGHVNLMLNMEGCDQLAEKADRREFVDLLKMMLMIDADQRIAPSDALTHPFVTMQHLMDFPHCNHVQSCFHIMDVCHLRTSIFDTLNRNKAPPLMKPVTLPSAPNITVAFNKMPSVHSQTLPPSAPPVVHPGIPIQTGSAQFGCNESFQQALILCPPAMQGIPSNPNQPAGYSVRMENTIPLVTQAPAIQPLPMRPGVIAQQPWSNRTPQILVPAWQQVPPPATSLASDTVVGAQRRGDWGTTGTTAFPCLVLETKQMCWKVRPHSSHYSSVMPQPIVPNQMAVSAHQPINIGIAHVVWPQPASNKRNKPSQNRSMNVSHFTDTQPSVCPSPKMPEMLPSVEPQTSSPERAVQAQVKQEPKQTEEEESCCKTTVPNKQRESIIIRESPSPAVSVISISSGTDEEEEQAQRCSLNKCKGSPECEACTGSLNMERVCSLSSPDSSLSTSSSASAQSSPSPCKRPSSISEDDGHESGCETVDGSPPSDSSLGPHESPFPERRFLRNQNQNQEPRARRGHPNNTGLNKPAVRTVVVPPMRVLNNNHHPNNEHLAISTVFESSCQSRSRCGPGRLSHLSTPTLPRQQKLSSSFQPQPLGFGQVQHYGSCHKEWNGNYRQPRRPQAFIPPTVHGPTFPLPHGSPTHSAGHPPPPALLSYPPSAPVAHLLPSPCPPPAPRPVLQPAYSLVHHQGISMGINHRLLPSPTLLPQGQFKALFPPHSYVASPAYAGFPLSPSKLSQYPYI
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0003824 (catalytic activity), GO:0016740 (transferase activity), GO:0140096 (catalytic activity, acting on a protein), GO:0004672 (protein kinase activity), GO:0016772 (transferase activity, transferring phosphorus-containing groups), GO:0016773 (phosphotransferase activity, alcohol group as acceptor), GO:0004674 (protein serine/threonine kinase activity), GO:0016301 (kinase activity)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0009987 (cellular process), GO:0051716 (cellular response to stimulus), GO:0042221 (response to chemical), GO:0009410 (response to xenobiotic stimulus), GO:0070887 (cellular response to chemical stimulus), GO:0071466 (cellular response to xenobiotic stimulus)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)
Protein: Eosinophil peroxidase isoform X1 (A0A8M9Q5S9)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR001073: C1q domain (domain) [764-892]
- IPR019791: Haem peroxidase, animal-type (family) [131-727]
- IPR010255: Haem peroxidase superfamily (homologous_superfamily) [140-725]
- IPR008983: Tumour necrosis factor-like domain superfamily (homologous_superfamily) [769-892]
- IPR037120: Haem peroxidase domain superfamily, animal type (homologous_superfamily) [124-727]
Sequence:
MNLPTFLFVVGCCCALSMGEEESPGRPFILDSIEEAKKIVDAAYKYSRDESLARVRKDVIKPSDKLRLLKQPARKTREAVRAADYMAQTLRLISEKAHHVHKRSINATNLLTQDELQTITRMTGCEAQTRPPSCRTTPLINKYRTASGVCNNRKNPLLGASNTPFARWLPAQYEDAVSQPKGWDPNKLYNGAALPMVRLVSNRILATADADIESDHDFTFMLTIFGQWVDHDLTFTPFSPSIRSFSNGIDCENSCERSEPCFPISAPPGDQRLRPNTCLPVFRSAPTCGSGHTAYMFGEVPNVREQINTLTAYLDAGQVYGSEDGLAKELRDLTNDGGLLRVNNRFKDNGRELLPFTSVNTNLCATRQKILNDSTLTEVPCFIAGDARVNENPALNSLHTLFVREHNRLARALHVLNPTWSSETLYQEARKIVGAFNQILVIKEYLPLIVGPDAYNRHLGPYPGYNENVDPTIANVFATAAFRFAHLTIQPFIFRLDENYKNHPQFPSVPLYEAFFSPWRVIFEGGIDPVLRGLIGRPAKLNTQDHMLVNALRERLFAFTSHIALDLASLNMQRGRDHAIPGYNAWRRFCGLSAPQNEQELAVVMNNTELARKLIELYGTPENIDVWLGGVAEPFAPGGRVGSLFACLISRQFQKIRDGDRLWFESNGVFTTKQKTALASVSLARIICDNTGILKVPRDPFRFRSPANFVNCGNIPAFDLEPWKETDRDSIPGPPGPRGPPGERGPQGVAGPPGPPGIPGPPINTTGQQSAFFASVNSILPATAKVVVFGQVLYNGQNHYNQTSGMFLCQIPGVYEFEFSCIGTRSLGFVTLKKNNRVELTPETVALNTRSLAEGKAVLSLQRGDRVYVEVSRSANGIGFSSYFSGHILFPV
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0016209 (antioxidant activity), GO:0003824 (catalytic activity), GO:0004601 (peroxidase activity), GO:0016491 (oxidoreductase activity), GO:0016684 (oxidoreductase activity, acting on peroxide as acceptor)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0009987 (cellular process), GO:0065007 (biological regulation), GO:0050896 (response to stimulus), GO:0032501 (multicellular organismal process), GO:0050817 (coagulation), GO:0065008 (regulation of biological quality), GO:0048856 (anatomical structure development), GO:0048869 (cellular developmental process), GO:0007275 (multicellular organism development), GO:0009653 (anatomical structure morphogenesis), GO:0006950 (response to stress), GO:0048646 (anatomical structure formation involved in morphogenesis), GO:0001525 (angiogenesis), GO:0035295 (tube development), GO:0050878 (regulation of body fluid levels), GO:0007596 (blood coagulation), GO:0009611 (response to wounding), GO:0001568 (blood vessel development), GO:0048468 (cell development), GO:0030154 (cell differentiation), GO:0048731 (system development), GO:0035239 (tube morphogenesis), GO:0042060 (wound healing), GO:0048514 (blood vessel morphogenesis), GO:0007599 (hemostasis), GO:0002064 (epithelial cell development), GO:0001944 (vasculature development), GO:0072359 (circulatory system development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005737 (cytoplasm), GO:0005622 (intracellular anatomical structure)
Protein: Gamma-adducin isoform X5 (A0A8M6Z434)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Cell membrane; Peripheral membrane protein; Cytoplasmic side
InterPro domains:
- IPR001303: Class II aldolase/adducin N-terminal (domain) [139-321]
- IPR036409: Class II aldolase/adducin N-terminal domain superfamily (homologous_superfamily) [126-382]
- IPR051017: Aldolase class II Adducin subfamily (family) [20-562]
Sequence:
MSGEPRQEVVTTPPPPSVGKREGYFDRVNENDPEYLRARNMSPDLRQDFNMMEQKKRVTQILQSPAFKDELEGMIQEQMNKGNNPTGLLALRQIADFFMSSSVAGFSTSPLSLGMVTPINDMFSVESSTMVKGEKQTRCKLASLYRIVDLFSWAHFASCYITVRVSKEQDHILIIPRGLSFAEASASNLVKVNILGDVIDQGSTNLRIDAAGFSPHAAIYSIRPDVRCIVHISTPATAAVSSMKCGLLPISQEALILGDIAYYNYQGSLDEQEERVELQKALGPTAKVLVLRNHGIVALGETIEEAFHYIYGAQYACEIQVNAFSCAGGMENLIVLDLEKFKARTQGVAQVGVNMGSQQKWRLGELEFESLMRMLDNLGYRTGYTYRHPIVREKPRHKSEVEIPATVTAFMFDEDDAPRFPLKLLQQRQQREKTRWLNSPNCYMKVNVADGASEENRRTKTTWMKSDDGGNASGTPIRIEDPNQFVPLNTNPSEVLQKRNKIREQNRFDVMTAGPQSQKLAGIVVERPPGQSPVQPYMGNDEEETGALPPNPFSELNEKEEHQRRLRIDENHTGVMLNGKDDHGDEDELIKRVSQLTTSLESMEISVRSGEKIEEALTPESSPSKSPNKKKKKFRTPSFLKKNKKKEKVEA
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005198 (structural molecule activity), GO:0005200 (structural constituent of cytoskeleton)
Biological Process (BP): GO:0008150 (biological process), GO:0032501 (multicellular organismal process), GO:0032502 (developmental process), GO:0007275 (multicellular organism development), GO:0048856 (anatomical structure development), GO:0048731 (system development), GO:0061008 (hepaticobiliary system development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043228 (non-membrane-bounded organelle), GO:0043232 (intracellular non-membrane-bounded organelle), GO:0005856 (cytoskeleton), GO:0015629 (actin cytoskeleton)
Protein: RNA helicase (A0A8M6Z099)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Subcellular location: Cytoplasm
InterPro domains:
- IPR001650: Helicase, C-terminal domain-like (domain) [481-642]
- IPR027417: P-loop containing nucleoside triphosphate hydrolase (homologous_superfamily) [203-647]
- IPR011545: DEAD/DEAH-box helicase domain (domain) [267-457]
- IPR014014: RNA helicase, DEAD-box type, Q motif (domain) [243-271]
- IPR000629: ATP-dependent RNA helicase DEAD-box, conserved site (conserved_site) [412-420]
- IPR014001: Helicase superfamily 1/2, ATP-binding domain (domain) [262-485]
Sequence:
MSHVVVDGSHGLDQQLAVLDLNSADGQGVGTGRRYIPPHLRNKDASKNAGNAYSSGRQSGYSVAPVQSYSPGWDGSRTNGFVNGYHDSRMNGTANFARGPLRNDRGGRGGFRGNRNGASFNQPVHNAGYGTYENKDGGWNSVVNRDAYASFGGRSDRGKSAFFNDRGASSRGRYERGGFGGGTGGNSRWVEESRDEEDWSKPMPPNERLEHELFSASNTGINFEKYDDIPVEATGTNSPGHIESFHDVDMGEIIMGNITLSRYTRPTPVQKYAIPIIKTKRDLMACAQTGSGKTAAFLLPVLSQIYSEGPGEALQATKASTQENGKYVRRKQYPISLVLAPTRELALQIYDEARKFAYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDYCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGSRQTMMFSATFPKEIQILARDFLEEYIFLAVGRVGSTSENITQKVVWVEENDKRSFLLDLLNATGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCPIMVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFYNDKNSNITKDLLDILVEAKQEVPSWLENLAYEHQHKSTNRGRPKRFSGGFGARDYRQMPGGGNTFGNRGARNTGGHGGNRGFGGNKGGFGSFGGDSYGGTYGNYGGNYTQVDWWGN
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0097159 (organic cyclic compound binding), GO:1901363 (heterocyclic compound binding), GO:0003676 (nucleic acid binding), GO:0003723 (RNA binding), GO:0003729 (mRNA binding), GO:0003730 (mRNA 3'-UTR binding)
Biological Process (BP): GO:0008150 (biological process), GO:0040011 (locomotion), GO:0002376 (immune system process), GO:0009987 (cellular process), GO:0050896 (response to stimulus), GO:0009605 (response to external stimulus), GO:0051716 (cellular response to stimulus), GO:0048870 (cell motility), GO:0042221 (response to chemical), GO:0050900 (leukocyte migration), GO:0042330 (taxis), GO:0097529 (myeloid leukocyte migration), GO:0006935 (chemotaxis), GO:0030595 (leukocyte chemotaxis), GO:0070887 (cellular response to chemical stimulus), GO:0016477 (cell migration), GO:0071621 (granulocyte chemotaxis), GO:0060326 (cell chemotaxis), GO:0097530 (granulocyte migration), GO:1990266 (neutrophil migration), GO:0030593 (neutrophil chemotaxis)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0005737 (cytoplasm), GO:0099080 (supramolecular complex), GO:0043229 (intracellular organelle), GO:0035770 (ribonucleoprotein granule), GO:0036464 (cytoplasmic ribonucleoprotein granule), GO:0045495 (pole plasm), GO:0043228 (non-membrane-bounded organelle), GO:0043186 (P granule), GO:0060293 (germ plasm), GO:0043232 (intracellular non-membrane-bounded organelle)
Protein: Catenin delta-1 isoform X2 (A0A8M9PZY3)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR000225: Armadillo (repeat) [385-816]
- IPR028435: Plakophilin/Delta catenin (family) [47-857]
- IPR011989: Armadillo-like helical (homologous_superfamily) [355-835]
- IPR016024: Armadillo-type fold (homologous_superfamily) [355-819]
Sequence:
MEQCENAASLLASVREQEMQFERLTRALEEERRSVGPSGTLPRPLPTLQNGRITGDAELERLKLSEGYINGTQYRMLDPGHIVESVTVESDPHEALPIISVETGDDGTTRRTETTVKKVTKTTTTRTVIPSVSDTLSLDGTGSVTGMPSYNSPMDRVYRPPPGPMDYPTSTVPRNYHYGPPAGYDDYRSVPPSEAYTSLSRGTRMDDRYRPVDGYRTLDSAYRTHSRPQLDPYSAQPQVGRMGSAVEISALQRFVPEPYGLEDDQRSLGYDEPDYGMGPAMHYSTMPRLAHPHHAPPPRRTGSYEGTLDGDMSGAGDMFYWGGGAPLAQGERGSMASLDSTLRKGPAPTAWRQPELPEVIAMLNYRLDPVKSNAAAYLQHLTFKNDKVKSEVRRLKGIPALVSMLDNPKKEVHYAACGALKNISYGRDPDNKIAIKNCDGIPALVRLLRKTRDQDLTDTITGTLWNLSSHDSVKMEIVDHALHALSDEVMVPHSGWERGNEGGEESCKPRHLEWETALTNTTGCLRNVSSERSEARRKLRECSGLVDSLMYIVQSQINCKDVDNKLIENSVCLLRNLSYQVHREIPGCERYLESIPVNQGPLPSQKGGCFSSRKGKGKREDDGTSDTIDIPKRTTPAKGYELLFQPEVVRVYTSLLKESKNPSVLEAAAGAVQNLCAGRWTYGRYIRATMRQEHGLPMMTELLSHGNDRVVRAMSGALRNLAIDARNRELLGKHAVPNLVANLPGGGQSQPARALSEETVVSVLSTMAEVVGSSVDAAKTLRSAQGIERLVLINKDSNRSDREVRGAGLVLQIVWGFKELRRTLEKDGWKKTDFMVNLNPPNNTRSNGGYEESTLPLIDRGGKQDREKDMIPLNDIGPDAYSTIDQRGRRNTLDDTLDRSDRDAPQGGMYGERRGSLPLLDSYDENLIVCITRREFPPPAYCPC
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0005515 (protein binding), GO:0019904 (protein domain specific binding), GO:0019899 (enzyme binding), GO:0019902 (phosphatase binding), GO:0019903 (protein phosphatase binding)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0009987 (cellular process), GO:0032501 (multicellular organismal process), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0009653 (anatomical structure morphogenesis), GO:0048870 (cell motility), GO:0009790 (embryo development), GO:0048598 (embryonic morphogenesis), GO:0009888 (tissue development), GO:0048731 (system development), GO:0016477 (cell migration), GO:0007369 (gastrulation), GO:0048883 (neuromast primordium migration), GO:0048882 (lateral line development), GO:0048880 (sensory system development), GO:0001667 (ameboidal-type cell migration), GO:0048925 (lateral line system development), GO:0042074 (cell migration involved in gastrulation), GO:0048916 (posterior lateral line development), GO:0008078 (mesodermal cell migration), GO:0048920 (posterior lateral line neuromast primordium migration), GO:0048881 (mechanosensory lateral line system development), GO:0048915 (posterior lateral line system development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0030054 (cell junction), GO:0070161 (anchoring junction), GO:0005911 (cell-cell junction), GO:0005912 (adherens junction)
Protein: Metastasis-associated protein MTA3 isoform X3 (A0A8M9QMB6)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
InterPro domains:
- IPR043151: Bromo adjacent homology (BAH) domain superfamily (homologous_superfamily) [2-145]
- IPR040138: Mesoderm induction early response protein/metastasis-associated protein (family) [1-590]
- IPR001005: SANT/Myb domain (domain) [267-316]
- IPR000949: ELM2 domain (domain) [148-259]
- IPR017884: SANT domain (domain) [266-318]
- IPR000679: Zinc finger, GATA-type (domain) [373-427]
- IPR001025: Bromo adjacent homology (BAH) domain (domain) [4-147]
- IPR035170: Metastasis-associated protein MTA1, R1 domain (domain) [463-541]
- IPR009057: Homedomain-like superfamily (homologous_superfamily) [269-321]
Sequence:
MAANMYRVGDYVFFENSSSNPYLIRRIEELNKTASGNVEAKVVCFYRRRDISQSLIQLADKHAKDLEEEKESPPESDLTEKQKHQLRHRELFLSRQYESLPATHIRGKCSVALLNETEVVLSYLEKEDTFFYSLVYDPTQKTLLADKGEIRVGPRFQADVPEMLQEGEADDRDQSKLEMKMWDPECPLTNKQIDQFLVVARAVGTFARALDCSSSVRQPSLHMSAAAASRDITLFHAMDTLHRHGYDLSSALSVLVPQGGPVLCRDEMEEWSSSEANLFEEALEKYGKDFNDIRQDFLPWKSLTSIIEYYYMWKTTDRYVQQKRLKAAEAESKLKQVYIPTYNKPNPNQISVSNGKMATVNGAAAGTGSFHTAGGGRACESCFAVQSAQWYSWGPPNMQCRLCVSCWMYWKKYGGLKMPSRAEGAEEKTPPSPAPNESRSRGHCARQSSHMVPIRNSGSPKSSMKTKQAFLLQATRLTKLARHMCRDLIRLRRAARRPFVPINCGAIKAEYMIRVSEGMTGRPLKPKSSPRSTLTSVLQYLESRPATHVQRPHRTPGLQVQPPRRLLSSLPSHGPLGMLGKRSYHHHSRVESAERRAGATGQENPAHIVGPILQHNGSSTGGSSLRGSGLMLRKRRPNWIDAPDDSFFLVSRETSC
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0140110 (transcription regulator activity), GO:0005515 (protein binding), GO:0003712 (transcription coregulator activity), GO:0003714 (transcription corepressor activity)
Biological Process (BP): GO:0008150 (biological process), GO:0032502 (developmental process), GO:0009987 (cellular process), GO:0032501 (multicellular organismal process), GO:0048856 (anatomical structure development), GO:0048869 (cellular developmental process), GO:0007275 (multicellular organism development), GO:0048468 (cell development), GO:0009790 (embryo development), GO:0030154 (cell differentiation), GO:0048513 (animal organ development), GO:0030097 (hemopoiesis), GO:0048568 (embryonic organ development), GO:0035162 (embryonic hemopoiesis), GO:0060215 (primitive hemopoiesis)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)