Protein: RNA binding protein fox-1 homolog (A0A8M9PBL0)
Organism: Danio rerio (Zebrafish) (Brachydanio rerio)
Function: RNA-binding protein that regulates alternative splicing events
Subcellular location: Nucleus
InterPro domains:
- IPR047131: RNA binding protein fox-1 homolog 1-like (family) [173-328]
- IPR012677: Nucleotide-binding alpha-beta plait domain superfamily (homologous_superfamily) [123-186]
- IPR017325: RNA binding protein fox-1 homolog 1-3 (family) [30-328]
- IPR000504: RNA recognition motif domain (domain) [133-171]
- IPR025670: Fox-1 C-terminal domain (domain) [211-299]
- IPR035979: RNA-binding domain superfamily (homologous_superfamily) [127-169]
Sequence:
MWKSSMLNSACVLLSGSGMLPAPSAFLYLAEGNQEGSNPADAMAQTYTTQYAHPSQNGIPAEFTALPSQDYTGQSRVPDHGLTLYTPAQTHSDLNNTDSQTTAISTGSNTAPTEDVTQTDVLISESTEKQQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKVNNATARVMTNKKVVNPYTNSWKLNPVVGAVYAPELYAVTGFPYPAAGATVAYRGAHLRGRGRAVYNTFRTAPPPPPIPAYGAVVYQDGFYGAEIYGGYAAYRYTQPATATAYSDSYGRVYATTDPYHHSIGPAAAYSVGTMASLYRGGCSRFTPY
Predicted GO terms:
Molecular Function (MF): GO:0003674 (molecular function), GO:0005488 (binding), GO:0097159 (organic cyclic compound binding), GO:1901363 (heterocyclic compound binding), GO:0003676 (nucleic acid binding), GO:0003723 (RNA binding), GO:0003729 (mRNA binding), GO:0003730 (mRNA 3'-UTR binding)
Biological Process (BP): GO:0008150 (biological process), GO:0050896 (response to stimulus), GO:0032502 (developmental process), GO:0009987 (cellular process), GO:0032501 (multicellular organismal process), GO:0048869 (cellular developmental process), GO:0009628 (response to abiotic stimulus), GO:0048856 (anatomical structure development), GO:0007275 (multicellular organism development), GO:0009653 (anatomical structure morphogenesis), GO:0003008 (system process), GO:0007610 (behavior), GO:0009887 (animal organ morphogenesis), GO:0048598 (embryonic morphogenesis), GO:0048468 (cell development), GO:0030154 (cell differentiation), GO:0009314 (response to radiation), GO:0060042 (retina morphogenesis in camera-type eye), GO:0048731 (system development), GO:0048513 (animal organ development), GO:0007632 (visual behavior), GO:0009790 (embryo development), GO:0050877 (nervous system process), GO:0060041 (retina development in camera-type eye), GO:0022008 (neurogenesis), GO:0009416 (response to light stimulus), GO:0007634 (optokinetic behavior), GO:0007399 (nervous system development), GO:0048880 (sensory system development), GO:0007423 (sensory organ development), GO:0090596 (sensory organ morphogenesis), GO:0060219 (camera-type eye photoreceptor cell differentiation), GO:0030182 (neuron differentiation), GO:0048666 (neuron development), GO:0042461 (photoreceptor cell development), GO:0048592 (eye morphogenesis), GO:0001654 (eye development), GO:0048699 (generation of neurons), GO:0046530 (photoreceptor cell differentiation), GO:0150063 (visual system development), GO:0043010 (camera-type eye development), GO:0048593 (camera-type eye morphogenesis), GO:0046549 (retinal cone cell development), GO:0001754 (eye photoreceptor cell differentiation), GO:0042462 (eye photoreceptor cell development)
Cellular Component (CC): GO:0005575 (cellular component), GO:0110165 (cellular anatomical entity), GO:0005622 (intracellular anatomical structure), GO:0043226 (organelle), GO:0043229 (intracellular organelle), GO:0043227 (membrane-bounded organelle), GO:0043231 (intracellular membrane-bounded organelle), GO:0005634 (nucleus)