Columns: Software | Description | Platform | License | Developer
AMPHORA | Metagenomics analysis software | Linux | GNU General Public License | Developer | AutoDock | suite of automated docking tools | Platform | GNU GPL | Developer | Bioconductor | R (programming language) language toolkit | Linux , Mac OS X , Windows | Artistic License 2.0 | Fred Hutchinson Cancer Research Center | BioHaskell | Haskell (programming language) | Linux , Mac OS X , Windows | GPL , LGPL , and BSD | Collaborative project | BioJava | Java (programming language) | Linux , Mac OS X , Windows | LGPL v2.1 | Open Bioinformatics Foundation | BioMOBY | registry of web services | Web | License | Open Bioinformatics Foundation | BioPerl | Perl language toolkit | Cross-platform | Artistic License & GPL | Open Bioinformatics Foundation | BioPHP | PHP language toolkit | Platform | License | Open Bioinformatics Foundation | Biopython | Python language toolkit | Cross-platform | Biopython License | Open Bioinformatics Foundation | BioRuby | Ruby language toolkit | Platform | GNU GPL v2 or Ruby license | Open Bioinformatics Foundation | BioSmalltalk | Smalltalk language toolkit | Cross-platform | MIT license | Developer | caCORE | ontologic representation environment | Platform | License | National Cancer Institute | caArray | ontologic representation environment | Platform | License | National Cancer Institute | EMBOSS | Suite of packages for sequencing, searching, etc. | Platform | General Public Licence (GPL) and Library GPL | Collaborative project | Galaxy | Scientific workflow and data integration system | Unix-like | License | Penn State and Emory University | GeWorkbench | Genomic data integration platform | Linux , Mac OS X , Windows | License | Columbia University | Integrated Genome Browser | Java -based desktop genome browser | Linux , Mac OS X , Windows | CPL 1.0 | GenoViz | IntAct | molecular interaction database | Platform | License | European Bioinformatics Institute | Java Treeview | microarray data viewer | Cross-platform | License | Developer | Taverna workbench | Tool for designing and executing workflows | Linux , Mac OS X , Windows | LGPL | myGrid | UGENE | integrated bioinformatics tools | Linux , Mac OS X , Windows | GPL2 License | Unipro