lhallee/plat_data huggingface dataset:
The following text describes a protein:
Function:
Component of the ribosome, a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell. The small ribosomal subunit (SSU) binds messenger RNAs (mRNAs) and translates the encoded message by selecting cognate aminoacyl-transfer RNA (tRNA) molecules. The large subunit (LSU) contains the ribosomal catalytic site termed the peptidyl transferase center (PTC), which catalyzes the formation of peptide bonds, thereby polymerizing the amino acids delivered by tRNAs into a polypeptide chain. The nascent polypeptides leave the ribosome through a tunnel in the LSU and interact with protein factors that function in enzymatic processing, targeting, and the membrane insertion of nascent chains at the exit of the ribosomal tunnel.
Subcellular Localization:
Cytoplasm.
Sequence:
MPSQKSFRTKQKLAKAQKQNRPLPQWIRLRTDNKIRYNAKRRHWRRTKLGI
The following text describes a protein:
Function:
This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance.
Sequence:
MEITEIKVKKRDKIGKQFAKKYRRSNLIPGVVYGAHLKENIHILVEKKDLWSLIKKGHAKEQHLLRLIIENGENTITENAILQDLQIDPIKDEFLHVDFHAITLEELVDVYVPILLVGEAKGIKQGGILQHGVEEILIRALPLDVPPHIEVDITDLEIGESITVGDLKFPENIKVLTPLDEVVVGIIPPKGYTEEVTTGEAQTESQT
The following text describes a protein:
Function:
Destroys radicals which are normally produced within the cells and which are toxic to biological systems.
Sequence:
MFGRAPMKAATATAAVGFSCLCYHTLPHLRYPAELPTLGFNYKDGIQPVMSPRQLELHYSKHHSAYVDKLNTLGKGYEGKTIEEIILATTGINESKVMFNQAAQHFNHSFFWKCLSPGGKPMPKTLENAIAKQFGSVDDFMVSFQQAGVNNFGSGWTWLCVDPQTKELLIDSTSNAGCPLTSGLRPIFTADVWEHAYYKDFENRRADYLKELWQIVDWEFVCHMYERATK
The following text describes a protein:
Function:
Plant defense peptide. Has antifungal activity against B.cinera, F.oxysporum, F.solani and H.annosum with IC(50) values of 0.4 ug/ml, 2.9 ug/ml, 0.9 ug/ml and 1.4 ug/ml, respectively. Has modest antifungal activity against C.albicans and T.reesei. Causes thickening of F.oxysporum hyphae and an increase in their branching. Lacks antibacterial activity against the Gram-negative bacteria E.coli and E.carotovora.
Subcellular Localization:
Secreted.
Sequence:
MAGKGVGSRLSTLFLLVLLVITIGMMQVQVAEGRMCKTPSGKFKGYCVNNTNCKNVCRTEGFPTGSCDFHVAGRKCYCYKPCP
The following text describes a protein:
Function:
Specifically recognizes and binds N6-methyladenosine (m6A)-containing RNAs, and regulates mRNA stability. M6A is a modification present at internal sites of mRNAs and some non-coding RNAs and plays a role in mRNA stability and processing.
Sequence:
MNGDVICFQTLNLRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSAENVILIFSVNRTRNFQGCAKMTSKIGGSVGGGNWKYAHGTAHYGRNFSVKWLKLCELSFQKTRHLRNPFNENLPVKISRDCQELEPSVGEQLASLLYLEPDSELMAISLAAESKREEEKAKGVDPENGENPDIVPFEDNEEEEEEESEEEEDSFSQVPGAATQGRGRGRGIMWPPHMPLARGTRPMPGTQGFPPVMMGADGLSYGTITPDGFPMPNLFGVGPRAFAPYGPRFSGDFPGPASGMMFRARPSQHFPAGGFGMMMGPGRAPFMGGMGVAGINPARPGRPVGMPQMFPPPSLPSSQNINRVVKRDQRDNDRNDRYSAGSDHIKGQEMPSPGRRPDDETQYHRGFKAHREDQHGGGNNFRNDDSESEDEAPRRSRHG
The following text describes a protein:
Function:
Required for pre-mRNA splicing as component of the activated spliceosome.
Subcellular Localization:
Nucleus.
Sequence:
MNIIIEGAENIDSLPYVDDSVNENEQELINKLISDEMSTFTPPDYLAQLPSFIDIDYNNFQFLENDFKRMEKEEKMKEFDIGRYKVEPTTTMIKQQLNEKQWNDSLNNARSQLEHQDIRKINLELLQRYGGNSWKLYLSDLEILQKTLKKQLDQKKQQIEEINIQRKLSQEQTFEKIQQHDKKFLELVYKNTEIESACKSIELEIEQLKLKQQLQQQQENGDLNNK
The following text describes a protein:
Function:
May be involved in integrin signaling in neutrophils. Binds to PtdIns(4)P.
Domain:
The SH3 domain binds to PtdIns(4)P.
Sequence:
MGSNQDFRNLQAKFQTSQPELGELFRKTPKPELNKVLKKFPQTELSEQPKKSSQSELSAVSLKPLQLQFADLPRKPPQPGVLKKSPQPEFPHLANKPVQAEFPRKPLHPEFTGLKKPSQAEFTDLKKPPQPQFASLPKKPPKPEFGELSKRPPQLETPQEPSAPPAQKLLKPEPNNPARPLGELKPKMFWHLEANEAPKRPLPSESSTFPKKPLQPEAVVGFSRKSQPQSESIEVSQTSPSKCGSRELDSHSPQPDISTFPKNNENFRKPSYPQATGCPKSPKQPMFYEFPQTPPRKPESCNPQSHSPLPDFNAFPKKHPQLQPSDLTRASSEPEVCKVPKKTQKPDPNVLSQKPSQPELGHLPRTSSDPEFNSLPRKFLQPQHGKFFQPEFPKGLPRKPKLPGSVSECSLPSASAGSSPQCPLSPGLIVPGIPRWRSEDFQVQRPPRRRPLPSASSLGHPPAKPALPPGPINIQSFRRAAATAAAVLKTGSSTGTHFQAQQPQHIAQNPDEIYELYDAVEATDDSSISPRGRDEMLSTQQATRWPQQEPELRKKATQPQQLPATDPKLLKQIRKAEKAEREFRKKFKFEGEIVIHTKMMIDPNAKTRRGGGKHLGIRRGEILEVIEFTSKDEMLCRDPKGKYGYVPRTALLPLETEVYDDVSFGDPLDMQPFPR
The following text describes a protein:
Function:
Sequence-specific DNA-binding transcription factor (By similarity). Plays a role in hindbrain segmentation by regulating the expression of a subset of homeobox containing genes and in Schwann cell myelination by regulating the expression of genes involved in the formation and maintenance of myelin (By similarity). Binds to two EGR2-consensus sites EGR2A (5'-CTGTAGGAG-3') and EGR2B (5'-ATGTAGGTG-3') in the HOXB3 enhancer and promotes HOXB3 transcriptional activation (By similarity). Binds to specific DNA sites located in the promoter region of HOXA4, HOXB2 and ERBB2 (By similarity). Regulates hindbrain segmentation by controlling the expression of Hox genes, such as HOXA4, HOXB3 and HOXB2, and thereby specifying odd and even rhombomeres (By similarity). Promotes the expression of HOXB3 in the rhombomere r5 in the hindbrain (By similarity). Regulates myelination in the peripheral nervous system after birth, possibly by regulating the expression of myelin proteins, such as MPZ, and by promoting the differentiation of Schwann cells (By similarity). Involved in the development of the jaw openener musculature, probably by playing a role in its innervation through trigeminal motor neurons (By similarity). May play a role in adipogenesis, possibly by regulating the expression of CEBPB (By similarity); E3 SUMO-protein ligase helping SUMO1 conjugation to its coregulators NAB1 and NAB2, whose sumoylation down-regulates EGR2 transcriptional activity.
Subcellular Localization:
Nucleus.
Sequence:
MMTAKAVDKIPVTLSGFMHQLPDSLYPVEDLAAPSVTIFPNGELGGPFDQMNGVAGDGMINIDMTGEKRPLDLPYPSSFAPISAPRNQTFTYMGKFSIDPQYPGASCYPEGIINIVSAGILQGVTPPASTTASSSVTSASPNPLATGPLGVCTMSQTQPELDHLYSPPPPPPPYSGCTGDLYQDPSAFLSPPPTTSTSSLAYQPPPSYPSPKPAMDPGLIPMIPDYPGFFPSPCQRDPHGAAGPDRKPFPCPLDSLRVPPPLTPLSTIRNFTLGGPSAGVTGPGASGGGEGPRLPGSGSAAVTATPYNPHHLPLRPILRPRKYPNRPSKTPVHERPYPCPAEGCDRRFSRSDELTRHIRIHTGHKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDYCGRKFARSDERKRHTKIHLRQKERKSSAPSSSASAQSSASGPGGSQAGGSLCGNSAIGGPLASCTSRTRTP
The following text describes a protein:
Function:
Choline transporter.
Subcellular Localization:
Cell membrane; Multi-pass membrane protein. Membrane; Multi-pass membrane protein.
Sequence:
MSHNPYNQPLISDNTYANGNPQQPYQGGQQYAAPQQYPPPPGYQQPPPQASGQGYSYDPYHIQYNPNVTVQDWKNVPNDQSQYSYYWSQPDSFQPETFARNTQPEKSKKQWNDLFWNIFFWVNFVATIALAAFIGYSVYKNVNDKSRNSAEDKEEMTKQTFMRDFGIGVGVGVALNIIHFVYASYAPLIYIKLGLWIGVILAVILALIPYFAFKVYYFFIYPAFFLIISIVVFCMMYRYIPFSAAVLQKTCWIIRHYPSIIMICIFQFFLNIIICSIFSVLVVGIAYLKWSYAIYVYVLFSFYWTITTLGYVIYMTGAGLASSWYFLYDTPYFPRHPTWESFKRAMTTSFGSASLAGFLLAVVETLKAIIEQRTDDIFTAIFQCIALCILSCLECLIKWLNRYALIYCATFGVPYVEACRRWAELSCKKFADVILSGCCISKAVGFNMFTFIIGGGLVGFGLGYMFDAKGYYIHAIATCVIAFFLTVCGFGVLEQPLLTISDTIIVCFAECPERLSTSAHDLYDAMCEAYGSNLRYNAGKLQKKQNKKK
The following text describes a protein:
Function:
Involved in RNA-mediated post-transcriptional gene silencing (PTGS). Main component of the RNA-induced silencing complex (RISC) that binds to a short guide RNA such as a microRNA (miRNA) or small interfering RNA (siRNA). RISC uses the mature miRNA or siRNA as a guide for slicer-directed cleavage of homologous mRNAs to repress gene expression (By similarity).
Sequence:
MDRGGYRGGRGDGRGRGGGGDRGRGYSGRGDGRGRGGDGDRGYSGRGDGHGRGGGGDRGRGYSGRGDGRGRGGGGDRGRGYSGRGDGHGRGGGGDRGRGYSGRGRGFVQDRDGGWVNPGQSSGGHVRGRGTQLQQPPPQEVPPSSSQAQVSQGVAPGDVGQGGVGDVGRDGVGDVGRDGVGDVGQGGVGDVGQVGVGDVGQGGVGDVGQGGVGDVGRDGVGDVGRDGVGDVGRGGVGDRGQSQSGLSSGHFGRGTQLQQPQPQAVSQSSSQGQVSQSFATGGVGLGAWARKPQLFSDSTVLPSSSSSNVVASHTASGSQVMTPKPSSSDKKEPVKRPDKGGNIKVKGVINLSVNHFRVSFSTESVIRHYDVDIKGENSSKKISRFELAMVKEKLFKDNNDFPNAMTAYDGQKNIFSAVELPTGSFKVDFSETEEIMRGRSYTFIIKQVKELKLLDLQAYIDGRSTFIPRDVLQGMDVVMKEHPSKRMITVGKRFFSTRLEIDFGYGVGAAKGFHHTLKPTVQGLSLCLNSSLLAFRKAISVIEYLKLYFGWRNIRQFKNCRPDDVVQELIGLKVTVDHRKTKQKFIIMGLSKDDTKDIKFDFIDHAGNQPPRKISIVEYFKEKYGRDIDHKDIPCLNLGKKGRENFVPMEFCNLVEGQIFPKEKLYRDSAAWLKELSLVTPQQRLENINKMIKSSDGPRGGDIIGNFGLRVDPNMTTVEGRVLEAPTLKLTDRRGNPIHEKLMSESNQWNLTTKGVTKGSIIKHWAVLDFTASESLKKKMPGYFVNKLIERCKGLGMQMEAPIVCKTSSMETLYDGNALEELLRSVIDEASHNHGGACPTLVLCAMTGKHDGYKTLKWIAETKLGLVTQCFLTISAIKGETVSDQYLANLALKINAKVGGTNVELVDNIFSFFKKEDKVMFIGADVNHPAAHDNMSPSIVAVVGTLNWPEANRYAARVKAQSHRKEEIQGFGETCWELIEAHSQAPEKRPNKIVIFRDGVSDGQFDMVLNVELQNVKDVFAKVGYNPQITVIVAQKRHQTRFFPATTSKDGRAKGNVPSGTVVDTTIIHPFEYDFYLCSQHGAIGTSKPTHYYVLSDEIGFNSNQIQKLIFDLCFTFTRCTKPVALVPPVSYADKAASRGRVYYEASLMKKNSKQSRGASSSSASVASSSSSVTMEDKEIFKVHAGIENFMFFV
The following text describes a protein:
Function:
Cell wall formation.
Subcellular Localization:
Cytoplasm.
Sequence:
MDVGANGQENVDAIDTVEIITVDGRHQILYRSDLAFGYRMSPFQAMQDLAAIVSVTFRLLPSALANERQQAYLRKRRWSQSVRERTTGSVFRNPPGKGASAGELIEKARLKGFKVDSAEVSKVHANFSINTSFRCQNHVGIKWQNDNCSHRERRKKERIMAMGSAMHRRCSRA
The following text describes a protein:
Function:
Cyclic amidohydrolase that catalyzes the reversible conversion of creatinine to creatine. Is also active toward glycocyamidine, though the reaction rate is very low, but it is completely inert toward hydantoin and its derivatives.
Miscellaneous:
MISCELLANEOUS: The proposed catalytic mechanism involves two water molecules. The first molecule is a hydroxide ion that is bound as a bridge between the two metal ions and attacks the carbonyl carbon of the substrate. The second water molecule, that is bound to the carboxyl group of Glu-122 and to the metal 1, functions as a proton donor in catalysis.
Sequence:
MSKSVFVGELTWKEYEARVAAGDCVLMLPVGALEQHGHHMCMNVDVLLPTAVCKRVAERIGALVMPGLQYGYKSQQKSGGGNHFPGTTSLDGATLTGTVQDIIRELARHGARRLVLMNGHYENSMFIVEGIDLALRELRYAGIQDFKVVVLSYWDFVKDPAVIQQLYPEGFLGWDIEHGGVFETSLMLALYPDLVDLDRVVDHPPATFPPYDVFPVDPARTPAPGTLSSAKTASREKGELILEVCVQGIADAIREEFPPT
The following text describes a protein:
Function:
Catalyzes the GTP-dependent phosphorylation of 5-hydroxy-L-lysine.
Subcellular Localization:
Cytoplasm.
Sequence:
MMEEGAELINRPFLDLRAAADLLMKLYEVKAADIEEMKSFTDQNFHIKLDIPITVGCSGNERSDQFVLKLYNSKDSTDGNRVELAVNTMAYLSNKEFCCPQPVCNKHGKLVHLEKVSCDEGNTGVEGNNGKHGLFLVVLLSFMPGQLLSSLDPMPKEVIVCIGRKLAQLHKILEASLVGSADKDCNLQRLVKDFEDYNREKPSTYCSGEWSLERVTGQRHLLDLVDDTRLRAAIAKVIDLYEEHVEPVRHLFKKGIIHGDINNDNVIISKQLESHQPSNKRFIVSGIIDFGEAAYSCLIFDLAVGLSELVLVNGTSAAGRFLQGYLSLNSIPDIEKKLLYYLVLVRYAQRIMLSLEAKPRDPLNDYIMQDVENCAGLLLQLLQMQKGEVETIWNI
The following text describes a protein:
Function:
May play a role in compacting or stabilizing the myelin sheath possibly by binding the negatively charged acidic phospholipids of the cytoplasmic membrane.
Subcellular Localization:
Cytoplasm, perinuclear region. Note=Present in the major dense line of CNS myelin.
Sequence:
MSQKMAKEGPRLSKNQKFSEHFSIHCCPPFTFLNSKREIVDRKYSICKSGCFYQKKEEDWICCACQKTSRRATSPQRPKHQPAASPVVVRAPPAKPKSPLMPAKPRSPPRPAKPRSPSRTERQPRPRPEVRPPPAKQKPPQKSKQPARSSPLRGPGTSRGGSPTRAPRFW
The following text describes a protein:
Function:
[CLE44p]: Extracellular signal peptide that regulates cell fate. May act with TDR as a ligand-receptor pair in a signal transduction pathway that represses tracheary element differentiation but promotes the formation of procambial cells adjacent to phloem cells in the veins. Regulates the transition of protophloem cells from proliferation to differentiation, thus impinging on postembryonic growth capacity of the root meristem; this signaling pathway requires CRN and CLV2.
Subcellular Localization:
[CLE44p]: Secreted, extracellular space. Note=Probably secreted from the phloem cells and distributed in the procambial region.
Sequence:
MATTIDQTSIKSLHFHQVIRLIITIIFLAFLFLIGPTSSMNHHLHESSSKNTMAPSKRFLLQPSTPSSSTMKMRPTAHPRRSGTSSSSARKRRREFRAEAHEVPSGPNPISN
The following text describes a protein:
Function:
Component of an histone acetyltransferase complex.
Subcellular Localization:
Nucleus.
Domain:
The PHD-type zinc finger mediates the binding to H3K4me3.
Sequence:
MEDATHTLLQDFVDSLANLPSEVGHLLCEIAYLDYAKKSAKDDQPPVSQAGNGESGLNKKWYSVDESRRKAASKQSSIVRHSHKAPNNLLTPNPKEPVLIERALAHYDDAIKLSKEKEKFASGAVNLVTRHLERLNQELAKLAATTGVEVPEFKREPSEPPTAPGSLNALTNGASNAAGTPAPASEASRSNKRKQLSIDTPSPHTFTPTQLPAIGGSSSAQASSQANKRRAGQARQTLRIHMPSMQPKETEDMAAIEYGPGEEAEGDEGEESNAGDDTTLYCFCQKVSYGEMIGCDNKTCQYEWFHVSCLGLKETPIGKWYCPQCTAEGKGQKFLQTGRQRKRA
The following text describes a protein:
Function:
Protein O-glucosyltransferase. Catalyzes the reaction that attaches glucose through an O-glycosidic linkage to a conserved serine residue found in the consensus sequence C-X-S-X-[PA]-C in epidermal growth factor-like repeats. Regulates Notch signaling by glucosylating Notch in the ER, glucosylation is required for the correct folding and cleavage of Notch.
Subcellular Localization:
Endoplasmic reticulum lumen.
Sequence:
MSRCEYACSYSSPSTPLQLLHSKHSATANRVFISPIVQVNLPIRYFFAQLQNSQGRNLSEPAAGLRLHVEKERSDEHCRFHTTLVDRGGGSYIARIRLFNSCERLRIALLAEGKERLCEVDMRNVDGSRMLQEECICPSTSLPRLDEWMESARCEEEPQLDSDLSRFPGIDFASVLNDAMQLFGQPQHSRSYSTCHYAIKDNQIYRSCYGEYVGFASFADDVLLSLTRKMRLPDTQFIMNLGDYPLSNEARGIKLPIISWCGSTETMDIVVPTYSLTNTLLRGELFHPLHDPFAAAPTPWKKKSERAVFRGRDSNQLRLDVARLSLERPHLLDAGITRYFFFDKEKHPETKPTIPMSDFFKHRFIISIDGTVAAYRLPYLLAGDSVVMKSASKHYEHFYSRLTPYDHYVPFDGDNVVQTLSNMKQFAIDHLQPLNIFCYYARFFHAYSNRLVAGEISIEGMEEISQKGRRDCECGSPSDRGKMKSEL
The following text describes a protein:
Function:
Cell-cycle-regulated enzyme of importance in nucleotide metabolism. Catalyzes the first enzymatic step in the salvage pathway converting thymidine into thymidine monophosphate. Transcriptional regulation limits expression to the S phase of the cell cycle and transient expression coincides with the oscillation in the intracellular dTTP concentration.
Miscellaneous:
MISCELLANEOUS: Two forms have been identified in animal cells, one in cytosol and one in mitochondria. Activity of the cytosolic enzyme is high in proliferating cells and peaks during the S-phase of the cell cycle; it is very low in resting cells.
Subcellular Localization:
Cytoplasm.
Domain:
KEN box sequence located in the C-terminal region is required for its mitotic degradation by the APC/C-FZR1 ubiquitin ligase and interaction capability with FZR1.
Sequence:
MNYINLPTVLPGSPSKTRGQIQVILGPMFSGKSTELMRRVRRFQIAQNKCLVIKYAKDTRYSSSFSTHDRNTMDALPACLLRDVAQEALGAAVIGIDEGQFFPDIVEFCEVMANAGKTVIVAALDGTFQRKAFGSILNLVPLAESVVKLTAVCMECFREAAYTKRLGLEKEVEVIGGADKYHSVCRVCYFKKSSVQPAGPDNKENCPVLGQPGEASAVRKLFAPQQVLQHNSTN
The following text describes a protein:
Function:
Involved in the export of mRNA from the nucleus to the cytoplasm.
Subcellular Localization:
Nucleus. Cytoplasm. Note=Localizes at both the nuclear and cytoplasmic site of the pores. Shuttles between the nucleus and the cytoplasm.
Domain:
The NTF2 domain heterodimerizes with MTR2. The formation of this heterodimer is essential for mRNA export and binds to all of the nucleoporin-FG-repeats; The RNA-binding domain is conserved in most NXF proteins but may be absent in yeasts.
Sequence:
MSYRGRGGGYNNNRGQFSSGPHQHQQNVDSFVAANQYPIEIMGWNGASSGECINFISRKCKVIVSNYSVDSNSGVLKGYVKNESQANTLLNWSGVKFAGQSLRFSKGVSNISNQMGGGASTGSQSTIETISQFLKARYQPEIKMLNLSNVKQDPTLTAQGFFGSLSVSSKFFPALMKVASDLKLDVDSIDLSNNELQDLQTLTSMAQTFPKLQNLSLQNNNFTKIKVFETWRHKLNFLRELILFNNPIVQTNDPAEIQTIKLELMKSFPRLVVLSGEILRNEQVLIANLSFPFESPETMFFQDEDSRNLATNFIANYLKLWDANRSELMILYQNESQFSMQVDSSHPHLIESGNSGYSGSTDFGYYLNNSRNLTRVSSIKARMAKLSIGQEQIYKSFQQLPKTRHDIIATPELFSMEVYKFPTLNGIMITLHGSFDEVAQPEVDGSASSAPSGPRGGSRYHSGPKHKRIPLSKKSFDRTFVVIPGPNGSMIVASDTLLIRPYTSDFPWKVQKLPSNPTAATPGVSATSTPSPLPPTTITTPQLAPPGTGPTTADLPADIKARLNQIQQELLVKILLETKLNINYGIMLCEQSNWDYQQASVNFKNSAASLPSDAFVQ
The following text describes a protein:
Function:
This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5. Involved in ergosterol biosynthesis.
Subcellular Localization:
Endoplasmic reticulum membrane; Single-pass membrane protein; Cytoplasmic side. Mitochondrion outer membrane; Single-pass membrane protein; Cytoplasmic side. Cell membrane; Single-pass membrane protein; Cytoplasmic side.
Sequence:
MLSLSSTDLILLSVIGALTLYWLYATLFANPSSSTAHRTNPTHQQQLQGFNIHNGPRSDSNPELLAAGRDFVKKMDLQKKKAVVFYGSQTGTAEDYATRIAKEAKSKFGISSLVADPDEYDFDCLEKLRADQLAIFVLATYGEGEPTDNAVNMLEQLKEQQTEGNQLDHLNYVVFALGNRTYEQFCQMGIIVDELLTKRGAKRIGELGMGDDDKSMEEDYLAWKDPMWEQVQKVMGWEEGAGGDEPDFLVKEVEVNPGKEGSIDDAQVYRGELSGRALMGTRGIFDAKNPCPARVANARELFAAGDRNCVHMEFEIQGTGIRYQTGDHLAVWPVNPDSEVARLMKLLGLWEKRATAVEISSLDPMLAKVPFPTPASYEAIFRHYLDISCIASRQLLSGLARFAPTDAASAALKAIGTDKEHYQRVVAGPGLRLGECLMSVLPGGAEKLSVEDPLSESFGQGWFQTYQIPFDQIISGLPRLQPRFYSISSSPKMYPDQIHITAVVLKYPSGSRMIYGCGTNYILNAKMFLHGEKERMEHQPIDQRSSGAPHYTLSGPRGKYLEDGTKLKIPIHVRRSNFRLPTSPKIPVIMIGPGTGVAPFRAFVQERMMLARKAKAKAKEANGLQGEADALNDWAEIMLFYGCRKEEEDFLYKNEWPEYAEEFNGKFKMFTAISRRPELGGKKEYVQDLIKLQTERIYKMIIEQKGYIFICGDGKSMVKCVEESLKTIFESTGTKNGAAELKFLKDRNRLLLDVWS
The following text describes a protein:
Function:
Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP).
Sequence:
MARIEIDKMSKLLQVYFIMGSNNCTRDPLAVLKEALDGGVTIFQFREKGEGSLIGEDRVRFAKELQTLCNEYSVPFIVNDDVELAIELDADGVHVGQDDEGITSVREKMGDKIIGVSAHTIEEARFAIENGADYLGVGPIFPTSTKKDTKAVQGTKGLAYFREQGITVPIVGIGGITIENTAAVIEAGADGVSVISAISLAESAYESTRKLAEEVKRSL
The following text describes a protein:
Function:
Essential for the formation and the abaxial-adaxial asymmetric growth of the ovule outer integument.
Subcellular Localization:
Nucleus.
Sequence:
MTKLPNMTTTLNHLFDLPGQICHVQCGFCTTILLVSVPFTSLSMVVTVRCGHCTSLLSVNLMKASFIPLHLLASLSHLDETGKEEVAATDGVEEEAWKVNQEKENSPTTLVSSSDNEDEDVSRVYQVVNKPPEKRQRAPSAYNCFIKEEIRRLKAQNPSMAHKEAFSLAAKNWAHFPPAHNKRAASDQCFCEEDNNAILPCNVFEDHEESNNGFRERKAQRHSIWGKSPFE
The following text describes a protein:
Function:
Together with wdr-20, binds to and stimulates the activity of the deubiquitinating enzyme usp-46, leading to deubiquitination and stabilization of the glr-1 glutamate receptor.
Sequence:
MSGASNTSQSGSKKKLSFIIRDEQEPLHRSAVSALQYDALHSRLFTGGSDTIIRTWSVPQHKDAFSARGGVRSAGKNSPVQYQSSLERHTDWVTDMVLCGNGKLLVSSSNDTTVKVWSIERDNKHGYLDSLNLHTDYVSCLAYAPLAEKVVSASFDRNIFVYDVNSNFNNFRVLVNNLLGCKNSIYSLATTPNLSHCLFFSPHQQIRMFDPRTNDKPMKMRGHSDNVRALLLNDDGTRALSAGSDGTIRLWDIGMQKNIATGIAHEEGVWTIQVDASFKFVYSGGRDRYVLKSPVNDLSKFQVLFKEEAPVKKLLLSEKENPSSIWVGTWKSDIKRWSLNSANQNSNGGDEEGVSSFSTYYTTCKPRSSSPPPGITAPKHIQRLTDARELQNTPELMISGAPAINKYKILNDKRHVLTSDTEDNVALYDVLAGKKVKEYGKRALENVFEEKSKTVYVPSWFIVDSKSGMLQITLDELDVFSSWLTTKDAGFDDSDKETKVNYGGMMLRSLFERWPPCKLATAEAGESDEVQKATSHYYTLPEHTPFIVCEGNGRPLFRLLVGDAGNEFESGELAQCVPPWVTDMIERNVLPKFNKMPFYLLPHPSTNSKQPKKDRLSATEMLLVKKVMEHVYEKVLGNVDANTVPLNQIHTKIEMYCNDQKLEPETDLRTVKHFYWKQSGELLLYYRPVKN
The following text describes a protein:
Function:
The small subunit is responsible for the binding to multiple recognition elements within the packaging initiation site cos. The terminase lies at a unique vertex of the procapsid and is composed of two subunits, a small terminase subunit involved in viral DNA recognition (binding to packaging sequence cos), and a large terminase subunit possessing endonucleolytic and ATPase activities (DNA maturation and packaging) (Probable). The terminase binds, cooperatively with the host factor IHFA/IHFB, to the cos site at the junction of adjacent viral genomes in the concatemeric DNA. The endonuclease activity of the large subunit cleave the viral DNA generating 5'overhangs of 12 bp in length (Probable). The terminase remains bound to the left end of the genome to be packaged, forming a stable DNA-terminase complex (Probable). In a reaction facilitated by the viral assembly catalyst gpFI, the DNA-terminase complex binds to the portal of the procapsid and the terminase packages the viral DNA into the procapsid until the next cos site on the concatemer reaches the complex ('unit length' packaging) (Probable). The downstream cos site is then cut generating the mature right end of the genome, the heterotrimer undocks from the DNA-filled head and remains bound to the left end of concatemer's next genome (Probable).
Subcellular Localization:
Host cytoplasm. Note=The terminase lies at a unique vertex of the procapsid during viral DNA packaging.
Domain:
The N-terminus contains a winged helix-turn-helix (wHTH) that binds the viral DNA (Probable). In the homodimer, the wHTH motifs are positioned on opposite sites of loop and probably bind to separate R elements in the cos site. The N-terminus also contains an ATPase site that regulates DNA binding activity. The central part contains a region for the self-interaction. the C-terminus contains region of interaction with the terminase large subunit (Probable).
Sequence:
MEVNKKQLADIFGASIRTIQNWQEQGMPVLRGGGKGNEVLYDSAAVIKWYAERDAEIENEKLRREVEELRQASEADLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGLPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQSG
The following text describes a protein:
Function:
Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence (By similarity). Transcriptional repressor of 'CONSTANS' expression (By similarity). Regulates a photoperiodic flowering response.
Subcellular Localization:
Nucleus.
Sequence:
MATQDSQGIKLFGKTIAFNTRTIKNEEETHPPEQEATIAVRSSSSSDLTAEKRPDKIIACPRCKSMETKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRRKSKPPGRVVVGMLGDGNGVRQVELINGLLVEEWQHAAAAAHGSFRHDFPMKRLRCYSDGQSC
The following text describes a protein:
Function:
Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8-dihydroguanosine 5'-triphosphate.
Sequence:
MLFDKYGRSLQKLRYVVNDECNYNCVFCHFEGQSRRQGRYLTAEDYGFVTSVFKSLGVADFKITGGEPLLRGDIDLIVANIAKTGAYVTLTTNGYLLRKWVRKLQAAGLKRANVSIHTTDPEKYSKITGVPPSAFREVLRGLTEARDVGISLKLNAVVLRGINTDRDSVKNLVKLAASLGAALQFIELMPSGWGASVFNELYEPIETLVNIIFELGGRPAGVRKELHNRPLYNIAGVTVELIKNFSNPTFCSGCTTMRLTSDGKLKTCIYADSSVDLMPYIKSRDVEGLLYAVRTALARREPRFKLYSSS
The following text describes a protein:
Function:
Catalyzes the interconversion between UDP-glucose and UDP-galactose.
Sequence:
MGRCVLVTGGAGYVGSHTVLQLLLEGFTAVVVDNLDNSSEFAVQRVAQLAGEFGKNLTFHRIDIRDIEALEKVFSTTKFDAVIHFAGLKAVGESVQKPLLYYKNNIIGTIALLEVMAAYGCKKLVFSSSATVYGWPKDLPCTEESPLCAMNPYGRTKLMIEEICHDIHRADSDWKIMLLRYFNPVGAHSSGHIGEDPRGIPNNLMPLIQQVSVGRRPTLAVFGNDYSTKDGTGVRDYIHVVDLADGHIAALHKFFEDPNIGCEVYNLGTGNGTSVLEMVAAFEKASGKKIPLVMAGRRPGDAEILYACTAKAEKELNWKAKYSIEEMCRDQWNWASKNPWGYGLPDPAN
The following text describes a protein:
Function:
May be involved in either the transport or processing of arabinose polymers.
Subcellular Localization:
Cell inner membrane; Multi-pass membrane protein.
Sequence:
MKKVILSLALGTFGLGMAEFGIMGVLTELAHNVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVMASVYFWVPDIRDEAKGNLREQFHFLRSPAPWLIFAATMFGNAGVFAWFSYVKPYMMFISGFSETAMTFIMMLVGLGMVLGNMLSGRISGRYSPLRIAAVTDFIIVLALLMLFFCGGMKTTSLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIAFNLGSAVGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGRYKRQQAADTPVLAKPLG
The following text describes a protein:
Function:
Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress. These functions might be dependent on each isozyme/isoform in each plant tissue.
Subcellular Localization:
Secreted.
Sequence:
MSVTSSSLFVFTFSLFVFFILNETSSCLAMLSSKTTRIPRQLRVDYYAKSCPQVEQLVGSVTSQQFKQSPVSGPATIRLLFHDCFVEGCDASILIASKPGSKELAEKDAEDNKDLRMEGFETIRKAKEVVEKKCPTVVSCADILAIAARDFVHLAGGPYYQVKKGRWDGKISMASRVGSNIPRANSTVDELIKIFNSKGLTIQDMVALSGAHTIGFAHCKNFLTRLYNYRGKGQPDPDMNPKLLKALRMYCPNFGGNTDIVAPFDATTPFIFDHAYYGNLQNKMGLLASDQALALDPRTKSLVQDFAKDKQKFFQAFASAMDKMSLVKVVRGKKHGERRRDCSMHM
The following text describes a protein:
Function:
RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
Sequence:
MEKGFSVGWRIRTTAEFRRIYAARQRIIGRYYLLYYRENEIKHSRLGVVASKRNVRKAVWRNRVRRVVKEAFRIRKKDLPAFDIVVVAKASSVEADNKELYECINKLFTQLEKQSKRSSSV