lhallee/plat_data huggingface dataset:
The following text describes a protein:
Function:
Protein involved in the regulation of cell wall assembly and 1,3-beta-glucan synthesis, possibly through the transcriptional regulation of cell wall glucan and chitin synthesis (By similarity). Involved in cellular response to nitrogen starvation and required for quiescence-maintenance by regulating negatively G0 to G1 transition.
Subcellular Localization:
Nucleus. Note=Localizes to the division site.
Sequence:
MSKNSFSSMANSVTSFFQSLTTPNRHADPSFRPSRREKQSRLPTPLQSVAASAYSGVNASQTGLLNDSRANSVTNLPNSSNTSQVGLNNISPAPVGYVPGSKTNELANNSMEMQEISPNGSASLPPPVSESWRRIDRWAEENYYELYCQLCYGATVADVDSLEYELECTLPRDVRESLYIHDGQDRGGQPTGILFGVTLLDIEEIEEESELWRRVAQSYAEATLAGKIDQAVASRQASFPPGAVQCVYAHPGWIPLAKDFVGNNIAIDLAPGPAGQWGQVILFGRDQDTKYVVARSWADFLAIVAYDMENGKWLVDEDDNSLRLIYGPPREQWSYLDILKYRARKAERRKFKKRDGKRTTRPIPKSIAKEDVTNSANSTAPSTGTTVLDDGLDNNYEDIPLYGPSKDEELIKKEELEADTDLGLINTSEINQPANLPDEPTAETSNPVSATTVEAVTTTADNKDEEKNDHVTEDVSQNSTIAEASSLQAQEEEKEIETTSVKQE
The following text describes a protein:
Function:
Acts as a catalytic component of the CCR4-NOT core complex, which in the nucleus seems to be a general transcription factor, and in the cytoplasm the major mRNA deadenylase involved in mRNA turnover.
Subcellular Localization:
Cytoplasm. Nucleus.
Sequence:
MPKKFALVIAVDCCNKRALLIALEYKDHEIENSLPHAIHQMYKVRKILTTRYGFHKKDVVVMTDKKGEKNNSHYPPTADNIKKNLKKMGYESRPGDKLFLYFIGHGGREEAPQGSPNDTGFVEFISTANSTRICGLMEGSHECIGRSVITDDKKKSSKNDKGKCTKEKGNKEKQTPSSIFLASCQSDEDCYYGHVNGHDVSYFTHTLLELLYLSEGQMSLMELVTEINRKLSRITDAVGNVIQQRAGLYCSPAQSEEKFLGGMIGKQKGGRVETYGDHGKASTSSTQTLSSMVLNSDTQEDAKSGVEKFQVKILGDSSAQITEDVLSSSNVGITYSKLSGSASSASLTNGHAAPMYPAGIRNGNETWFEVGRSKTYTPTADDIGHVLKFECSVVDAVTKSPVGQASTLQTNRVIPAPSPIPRRIIRVDGMGHLELDRRMTSSGTFTALSYNVLSETCASNDLYSYCPPWALSWPYRRQNLLREIIDYAADIICLQEVQNDHYDEFFAPELDKHGYHSLFKRKTTEVIVSSGNTIDGCATFFRRDKFSHVKKYEDNVALIVVLETKVNNQLVDNLGKRQLLCVANTHVHVQQDLKDVKLWQVHTLLKGLEKIATSADIPMLVCGDFNSVPGSAPHALLAMGKVDPSHPDLTVDPLNILRPHSKLVHQLPLVSAYSSFARTAGLAFEQHKRRLDGGTKEPLFTSVTRDFVGTLDYIFYTADSLVVESLLELLDEESLRKDTALPSPGWSSDHIALLAEFRCCKNKSRH
The following text describes a protein:
Function:
Responsible for synthesis of pseudouridine in chloroplastic 23S ribosomal RNA (Probable). Necessary for normal chloroplast rRNA processing and translation. Required for normal chloroplast development and maintenance. May function in other plastids, such as root amyloplasts.
Subcellular Localization:
Plastid, chloroplast.
Sequence:
MASVAASSSISFAASFLKIKAFPLSPRFFPIRTLRCSVSSSSSEPIEFDISFAPPKPKPSSTHGGVTPQQLFIPWIVRSDDGTLKLQSQPPARLIHNLAIDATTQNPKKKDKSKKKQPQATSSSSATTTASSPASHSEVKPKLSKAARRFYNENFKEQPQRLSKVLAAAGVASRRTSEELIFDGKVTVNGILCNTPQTRVDPSRDIIYVNGNRIPKKLPPKVYFALNKPKGYICSSGEKEIKSAISLFDEYLSSWDKRNPGTPKPRLFTVGRLDVATTGLIVVTNDGDFAQKLSHPSSSLPKEYITTVVGDIHKRHLMAISEGTMVEGVHCVPDSVELMPKQHDIPRARLRIVVHEGRNHEVRELVKNAGLEVHSLKRVRIGGFRLPSDLGLGKHVELKQSELKALGWKN
The following text describes a protein:
Function:
Specifically recognizes and binds N6-methyladenosine (m6A)-containing RNAs, and regulates mRNA stability. M6A is a modification present at internal sites of mRNAs and some non-coding RNAs and plays a role in mRNA stability and processing.
Sequence:
MLSAERSQPYARTISYANRRLSSVSQQNISKAKMPIGSLSSEIIGKSYTSRLLIGNPEGRIIIRTDQYNRDDFQVVYTNAKFFVIKSYNEADIHKSIKYGVWSTSSVGNLKLDTAFRDAQVIAASSSTLCPVLLFFSVNGSSHFCGVAEMVGPVDYQNDMDFWCRKNKWIGSFPVKWHIIKNVHNSTFRSILLQNNEDKPVTSSRDTQEIHYTPGTTMLELFKYTRAEGCVLDDFMVHEEEEARSGQLERFKLRQGAPHFIPAWHGPCTKRPMLPKSDSVLKDRIVSETNNLTDKLQNLNLDGHQSSCQEFGNRTSEASTTNTQKGSHCYGDQVLDNPVKVIASDVKFALDGERRRWKKVETTPTEKPQPETVARVSSKAPPRKHRKEGKNTLVHSASGAPEMTCEEQKIVGKPCSPAYGSTPSQACSKPVPGVVAIGSMLIPITTSI
The following text describes a protein:
Function:
Involved in the regulation of homocysteine metabolism (By similarity). Converts betaine and homocysteine to dimethylglycine and methionine, respectively (By similarity).
Sequence:
MEVNQKWNWDTKPILVKCGGFSSQLAKNVTEKVDGDPLWGSRFDATNPEAVIQTHLDFLRNGADIILTNTYQSSVEGFVKYLGVTRERGVELIQKSVQLAKQAKEQYLSEIGSEAESALPLIMGSIGPYGAYLHDGSEYTGNYADKMSKEELRAWHKTRIEICLAAGVDGLALETLPCLMEAEAVTELVLDNFPDAKFWVSLQCMDEKHMASGENFAEAALSLWRLVQSRKAENRLLGIGLNCVNPLFVTPLLSSLTKVAGSDRIPLVVYSNRGEIYDVEQGDWTGTGEEVVKFVPEWIQLGVRIVGGCCRVYPTDVLAIRKYVDGLNIKP
The following text describes a protein:
Function:
Allows acetamide to be used as a sole carbon or nitrogen source.
Sequence:
MPQSWEELAADKRARLAKTIPDEWKVQTLPAEDSVIDFPKKSGILSEAELKITEASAADLVSKLAAGELTSVEVTLAFCKRAAIAQQLTNCAHEFFPDAALAQARELDEYYAKHKRPVGPLHGLPISLKDQLRVKGYETSMGYISWLNKYDEGDSVLTTMLRKAGAVFYVKTSVPQTLMVCETVNNIIGRTVNPRNKNWSCGGSSGGEGAIVGIRGGVIGVGTDIGGSIRVPAAFNFLYGLRPSHGRLPYAKMANSMEGQETVHSVVGPITHSVEDLRLFTKSVLGQEPWKYDSKVIPMPWRQSESDIIASKIKNGGLNIGYYNFDGNVLPHPPILRGVETTVAALAKAGHTVTPWTPYKHDFGHDLISHIYAADGSADVMRDISASGEPAIPNIKDLLNPNIKAVNMNELWDTHLQKWNYQMEYLEKWREAEEKAGKELDAIIAPITPTAAVRHDQFRYYGYASVINLLDFTSVVVPVTFADKNIDKKNESFKAVSELDALVQEEYDPEAYHGAPVAVQVIGRRLSEERTLAIAEEVGKLLGNVVTP
The following text describes a protein:
Function:
Part of a potassium transport system.
Subcellular Localization:
Cell membrane; Multi-pass membrane protein.
Sequence:
MLARQRARRDTTGGCAMSSGIIPVVATIIALGVLSQVVADKLQVPSVLFLILAGIVVGPEVLGVVTLSSFGGIDTLAGIVGLSVAVIVFEGAFHLKLEKLREAPGAWLRLVTVGAAIALFGTAIVVRVLLGTGWDVAFLIGSLLVATGPTVITPILSVVPVRDRVGAALETEGVVNDVTAAILAIVVFRVVENPQRSVDVVLQDFVTRLGTGVLVGLVVAAVVWYILRRIDLSKGNAPQNARLVVLAGALVAYGAADTLYSEAGIAAVATAGVLLGNADLPYEKEIEAFKGDVTLVVLSFVFIGLAALLSFQTLLDLGVAGLAVAVLVALVIRPLAVFASTARSRYTSAERVFMSAVGPRGIIPASVATLFAVELQGYGMPQAANVLVGTVFLTILLTVVFEGGFARHIAQALNVIPMRVIIVGGGTVGRALAERLEDRGENVVLVEDDPEAVERARNEGYTVHSGDGSDTDELRAAGAENAKILTAATGDDDVNLLVAQLADSKFDIDTIIARANNPDNIDAFEDLGVSTVSSSLATAWGIDNIIERPALSNWMTEIGRSGDVQEVEVTSEELVGLTIADLDDDLPGGVIIALAGRDGDNQVPNPEFTIQHGDHLTFLGRKEAVRDALNWCHPDDG
The following text describes a protein:
Function:
Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins (By similarity). Essential protein required for chloroplast development and integrity. Essential for Embryogenesis.
Subcellular Localization:
Plastid, chloroplast stroma.
Sequence:
MGTLSLSSSLKPSLVSSRLNSSSSASSSSFPKPNNLYLKPTKLISPPLRTTSPSPLRFANASIEMSQTQESAIRGAESDVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPGGSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPLGGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLIDGVIDGDSIIPLEPVPDRVKPRVNYEEISKDPMKFLTPEIPDDEIY
The following text describes a protein:
Function:
Essential for spermiogenesis and male fertility (By similarity). Involved in the formation of sperm acrosome during spermatogenesis.
Miscellaneous:
MISCELLANEOUS: Association analysis reveals significant frequency of a synonymous (Ser-225) sequence polymorphism among clinical groups with different sperm traits: the donor group, which has the highest sperm count and motility level, has a significant higher polymorphism frequency compared to normal and asthenozoopermia groups.
Subcellular Localization:
Golgi apparatus. Cytoplasmic vesicle, secretory vesicle, acrosome. Note=Shift from Golgi to sperm acrosome.
Sequence:
MDAGSSRSLENAVNRIYHDQLVPKINTSKKMSTLAHPPNILEMSQEIKKNCGGKQVEITLERTKMTKGIKEKQSNDLEKAAFKRKAEGEEKPTRKKQAKITELDNQLITMPLPHIPLKNIMDVEMKLVYIDEMGVRYEFVESFMSTGSQPTCQAAEIVDPLSVHNFSFLPQIDKWLQVALKDASSCYRQKKYALAAGQFRTALELCSKGAVLGEPFDAPAEDIASVASFIETKLVTCYLRMRKPDLALNHAHRSIVLNPAYFRNHLRQATVFRCLERYSEAARSAMIADYMFWLGGGREESISKLIKLYWQAMIEEAITRAESFSVMYTPFATKIRADKIEKVKDAFTKTHPAYAEYMYTDLQALHMLPQTVDWSSFPPQQYLLTLGFKNKDDGKFLEKISSRKLPIFTEHKTPFGLTREDTVRQMETMGKRILPILDFIRSTQLNGSFPASSGVMEKLQYASLLSQLQRVKEQSQVINQAMAELATIPYLQDISQQEAELLQSLMADAMDTLEGRRNNNERVWNMIQKVGQIEDFLYQLEDSFLKTKKLRTARRQKTKMKRLQTVQQR
The following text describes a protein:
Function:
Catalyzes the phosphorylation of LysW-gamma-alpha-aminoadipate.
Subcellular Localization:
Cytoplasm.
Sequence:
MIVVKIGGSAGNDYDALCDDIAERWRAGERLILVHGGSDQTNRLGEALGHPPRFVTSPSGHTSRYTDRRTLEIFMMATAGLINKQLVERLHMRGVMALGLSGLDGRLLSGKRKATIRVIEQGRQMILRDDWTGTIEQVNRDLLHMLLAAGYLPVVAPLACSEAGEAVNVDGDRAAAAIATAIGAQTLILLSNVPGLLRNFPDESSLITHIPRNDLESSMTYAAGRMKKKLLGAQEALAGGVQRVILADARIPACVSQALNGGGTHIV
The following text describes a protein:
Function:
Essential for protein sorting in meiotic cell division of S.cerevisiae; it binds microtubules. Could also be involved in microtubule-associated motility. Necessary for membrane protein retention in a late Golgi compartment. Interacts with the MVP1 protein.
Miscellaneous:
MISCELLANEOUS: Present with 5960 molecules/cell in log phase SD medium.
Subcellular Localization:
Cytoplasm, cytoskeleton.
Sequence:
MDEHLISTINKLQDALAPLGGGSQSPIDLPQITVVGSQSSGKSSVLENIVGRDFLPRGTGIVTRRPLVLQLINRRPKKSEHAKVNQTANELIDLNINDDDKKKDESGKHQNEGQSEDNKEEWGEFLHLPGKKFYNFDEIRKEIVKETDKVTGANSGISSVPINLRIYSPHVLTLTLVDLPGLTKVPVGDQPPDIERQIKDMLLKYISKPNAIILSVNAANTDLANSDGLKLAREVDPEGTRTIGVLTKVDLMDQGTDVIDILAGRVIPLRYGYIPVINRGQKDIEHKKTIREALENERKFFENHPSYSSKAHYCGTPYLAKKLNSILLHHIRQTLPEIKAKIEATLKKYQNELINLGPETMDSASSVVLSMITDFSNEYAGILDGEAKELSSQELSGGARISYVFHETFKNGVDSLDPFDQIKDSDIRTIMYNSSGSAPSLFVGTEAFEVLVKQQIRRFEEPSLRLVTLVFDELVRMLKQIISQPKYSRYPALREAISNQFIQFLKDATIPTNEFVVDIIKAEQTYINTAHPDLLKGSQAMVMVEEKLHPRQVAVDPKTGKPLPTQPSSSKAPVMEEKSGFFGGFFSTKNKKKLAALESPPPVLKATGQMTERETMETEVIKLLISSYFSIVKRTIADIIPKALMLKLIVKSKTDIQKVLLEKLYGKQDIEELTKENDITIQRRKECKKMVEILRNASQIVSSV
The following text describes a protein:
Function:
Calcium-independent membrane-associated phospholipase that catalyzes complete diacylation of phospholipids by hydrolyzing both sn-1 and sn-2 fatty acyl chains attached to the glycerol backbone (phospholipase B activity). Has dual phospholipase and lysophospholipase activities toward diacylphospholipids. Preferentially cleaves sn-2 ester bonds over sn-1 bonds. Acts as a lipase toward glycerolipid substrates. Hydrolyzes fatty acyl chains of diacylglycerols with preference for the sn-2 position and of triacylglycerols with not positional selectivity. May also hydrolyze long chain retinyl esters such as retinyl palmitate. May contribute to digestion of dietary phospholipids, glycerolipids and retinoids, facilitating lipid absorption at the brush border.
Subcellular Localization:
Apical cell membrane; Single-pass type I membrane protein.
Sequence:
MVSMAGLGAKASSWNGYFTEYRGASWSIGGDGTLSQAVTLPNILKIYNKNLKGFSSSKIDWSLNMATTMAPIDLSPPRSTLTADHLARRPFRMWLPAMASCCCAWKLSVFFISFLFGGSDAVLPVNATSVKVGFILEDPKVENHDASEVVLDGSHINSNLHLVCFIEPRLPQGTDYEIHKNDLVKWEKITYTHQAADSIRYWSNDRTKTAISYNTSFHMIGTYGCYYGTLNKTINVKVENLNVALKLHPPTNFSEVQKYIMHMRDLTSIPGWGTSQQLLQGKGVDESCEVTPSSTAPPIDMSVHLLHASDVTVIGALGDTFTAGLGAKASSWNGYFTEYRGASWSIGGDGTLSQAVTLPNILKIYNKNLKGFSSSKIDWSLNMATTMAPIEELETQVKKLISEMTSGNGLYINFKDDWKVVTLHIGSFDLCHVCLDKERYGPSAMIKHLMRSLNLLKSKVPRLFVNLVLPIDVSNLDSVFSTRPHCKILGWNACPCMADGDVASKHVVASAAATYKKLVLELINSGIYDVSDKFAVVIQPFMFRGPRNKEGGLVAEFFGPDCIHLNTLGHASAATALWNNMLEPVGNKSDVWLTKASLKCPTQARPYFATKTNSHVVTGMLTDDEEDSSLGMPTGAAVAIAVVLGAVVIGIMLFVWKSRNSRPRNEVIRLIPTSHARPRI
The following text describes a protein:
Function:
May mediate accelerated ATP-independent bidirectional transbilayer migration of phospholipids upon binding calcium ions that results in a loss of phospholipid asymmetry in the plasma membrane.
Sequence:
MFPTGENDPAVEEISMPVFSEGSSPVVSEPPSLTREQERLDQGTRRPIPVSTIDWQTSMTSHFSPLHGLDFLKDVHQIIIQQTVELTDLMASLESENRYTVKVPRGETIYYATESSTSFQRTCFGSSRAFAMRLYDPTQQEAIQFRRRLACGSCCSIFLYLQELEVWIPPGEYVGKVKQKFNATKPCFVIYNKQMDIIYRIEGPESAFGCMWSKNHNFQIFTSDGMTQIGSIIHQWDQVQVAYNLFMQMPGQENNTRHKALLLGAAFLLEYMYFESAKKRQGCKCIC
The following text describes a protein:
Function:
Key enzyme in isoprenoid biosynthesis which catalyzes the formation of farnesyl diphosphate (FPP), a precursor for several classes of essential metabolites including sterols, dolichols, carotenoids, and ubiquinones. FPP also serves as substrate for protein farnesylation and geranylgeranylation. Catalyzes the sequential condensation of isopentenyl pyrophosphate with the allylic pyrophosphates, dimethylallyl pyrophosphate, and then with the resultant geranylpyrophosphate to the ultimate product farnesyl pyrophosphate.
Subcellular Localization:
Cytoplasm.
Sequence:
MLILVTPVFLLPLQSSVFGFPVSMENRALCSSLRMNGDQKSDISVQEKQDFVQCFSQIVRVLTEDEMGHPETGDYNAIGGKYHRALMVLVAFWELVELRKQDAESLQRALTMGWCVELLQAFFLVKPGAGLDAINVAMEACMYRLLKLYCQEQPYYLNLIQLFRQSFYQTEIGQTLDLIIAPQGNVDLGRFTEKRYKSSVNFYSFYLPVAAAMYMAGIDREKEHTNAKKILGRVLSDQDDYPHLFGDPNVTGKVGTDIQDNKCSWLVVQCLQRATPEQYQILKENFGQKEAEKVAPVKAVFEELDLPEDSYSHVMGLIEQYAAPLPPVIFLGLARKIYKRKK
The following text describes a protein:
Function:
S-adenosyl-L-methionine-dependent methyltransferase responsible for the addition of the methyl group in the formation of N6-methyl-N6-threonylcarbamoyladenosine at position 37 (m(6)t(6)A37) of the tRNA anticodon loop of tRNA(Ser)(GCU). The methyl group of m(6)t(6)A37 may improve the efficiency of the tRNA decoding ability. May bind to tRNA.
Miscellaneous:
MISCELLANEOUS: [Isoform 3]: May be produced at very low levels due to a premature stop codon in the mRNA, leading to nonsense-mediated mRNA decay.
Sequence:
MRGLEKQGSCATAAPCGCVQPALEAGNLLTEPIGYLESCFPAKIGTPRQPSICSHSRACLKIRKNIFNNPEHSLMGLEEFSHVWILFVFHKNGHLNYKAKVQPPRLNGAKTGVFSTRSPHRPNAIGLTLAKLEKVEGGAVYLSGVDMIDGTPVLDIKPYIADYDSPQNLSVHNDHHKLRAEAQVDGTANSCDQLLLSGRGKVQPRQSTKERPKCLEDRTSGENSQKSRDMSEIQHTLPEDRERALDLALEPSRGESMDMPENQLGPPELKSFLEEGTDRPRKVEGALVLPGSSAETQWDASYRARTADRVPYSVVPSWVTEAPVAPLQVRFTPHAEMDLRKLNSGDASQPSFKYFHSAEEAKRAIEAVLSADPRSVYRRKLCEDRLFFFTVDTAHVTCWFGDGFAEVVRIKLASESVQVADPEESLAALGS
The following text describes a protein:
Function:
Involved in both the arginine and lysine biosynthetic pathways. Phosphorylates the LysW-bound precursors glutamate (for arginine biosynthesis), respectively alpha-aminoadipate (for lysine biosynthesis).
Subcellular Localization:
Cytoplasm.
Sequence:
MRIVKIGGAALVRFEEVWASDGLSSSLRSPDTVVVHGGSRHVDELSRKLGVKIKRLTSPSGVTFRRTTKEVLDVYLAAMMRANRELVEFLQVRGINAVGVMGIEHELVIGRRKKLVKAVINGKTVAIRDDYSGTVERINVGALMELRKLGLPVIASVAYDPVENVPLNVDGDKVAYHMALATKARELVFVSDSAFMADGSVVERVNLNELPELLGYAKGGMRKKLMMAAKAVESGVERVVIQGLNGRTVIT
The following text describes a protein:
Function:
Receptor for the hormone galanin. The activity of this receptor is mediated by G proteins that inhibit adenylate cyclase activity.
Subcellular Localization:
Cell membrane; Multi-pass membrane protein.
Sequence:
MEEEEDNFVLFFGVNTSKCSLETNQTGAPPCWSGAAKGGPEVVIVPVLFGLIFLLGMVGNTMVLVILVRVRPGGRSSCSTTNIFILNLSIADFSFLLFCVPFQATIYSLPEWIFGAFFCKWVHYLAMATMLVSIFTLVAMSVDRYIAVVHAKHSSDIRSKRNAVLGVGVIWLLSLLIAIPVAQHQALMSGHQQAPNSSFCWENWAEGSTAKQTYKVMILLVGYLLPLVLITCCYAKVLHHLHTKVKNISKKSERSKKKTAQTVLLVVAVFLLSWLPHHIITMWAEFGHFPLNNISFTFRIISHCLAYGNSCINPILYAFLSENFRKACQQAFHCKCFLQPVPTEKLVRIHMENFSVTHSTTNV
The following text describes a protein:
Function:
3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.
Subcellular Localization:
Cytoplasm.
Sequence:
MNLEKDLEKIKELLKDVKYLTLDQITSFLEWSPKKKKDNKIIILSWIDSGDLIMDKKHRLSLPENSGYVKGVFRIIKNKFAFVDKEDSEEKEGIFIPKEEFNNALDGDTVLVEITEKKKSDKGAEGRVVKIIEHRKNTVVGILEKSKNFAFVIPTGSFGKDIYIPNSKIANADNKDLVAVEITFWGDDDRKPEGKIIKILGSSTNSKNMIDALIYREGLSEKFSNEAMQQTKEIIKEEIDYSNRKNLTNLSIITIDGADAKDLDDAVYVEKLENGNYKLIVAIADVSHYVKKETVLDLEARHRGNSVYLVDRVLPMFPKEISNGICSLNEKEEKLTFSCEMEIDLKGDVVNYEVYKSVIKSVHRMTYKDVNAILDGDKDLINEYSDIYEMLKQMLELSKILRIKKFTRGSIDFELPELKVILDEDNNKVEKVLLKDRGEGEKIIEDFMIAANETVAERIYWLELASIYRTHEKPDREKIVTLNEILSKFGYKIPNFDNLHPKQFQEIIERSKDKETSMLVHKTILRALKQARYTVEDISHFGLASSHYTHFTSPIRRYSDLMVHRVLFSTIDNSIKPFKEADLDEIAQHISKTERVAMKAEDESVRIKLVEYMQKRVGETLNVMVTGFAQKKIFFETDEHIECSWDITTAINYYAFDEENYCMRDTDSDKVFYLGDKVDVVLKKADLLTLEIAVVPLDDF
The following text describes a protein:
Function:
Involved in rRNA processing.
Subcellular Localization:
Nucleus, nucleolus.
Sequence:
MPKESKGKSAVRGESSIDSPSRTGAKPYNKRSAPTTSNGPSSKSQHTSKKPRFEKPNPSGSSSSLPGASKIKASIRQTKRLLAKPNLAPGTKIEAERRLKSLESDLEVASRKQVEKSRASRYHRVKFVERQKLVRRIARCKRNLARLNSDKAAQDLDSEGEASDDDDEGYGNQRLKESKMSKEELTKMLRWLRELLQYVMQYPADLRYVALFPTAEEGPSPPDAKEKDKSRQMAYQHLERVKKAIDDGQISEEVEVELSSKHRTLKKLATSTGGSSNGTTPTTSQAKNKQKMAKKTDKTTKNKRKNEEPISDDDDESDEDAAGAGGVKGDDFFAQDSDDEE
The following text describes a protein:
Function:
Major outer capsid protein involved in host cell membrane penetration. In the endocytic compartment, outer-capsid protein sigma-3 is removed by cathepsin proteases, which exposes the viral membrane-penetration protein mu-1. Both myristoylated peptides mu-1N and phi are released during infectious subvirion particles (ISVP) formation in the endosome. They associate with host membranes and mu-1N induces permeabilization and delivery of transcriptionally active viral particles into the host cell cytoplasm. Seems to induce apoptosis in the host cell; The viral outer shell polypeptides, of which mu-1 is one, impose structural constraints that prevent elongation of nascent transcripts by the RNA-dependent RNA polymerase lambda-3.
Subcellular Localization:
[Outer capsid protein mu-1]: Virion. Host cell membrane; Lipid-anchor. Host endoplasmic reticulum. Host mitochondrion. Note=Found in the outer capsid. Seems to associate with cell membranes. This association is enhanced by myristoylation (By similarity).
Domain:
The C-terminal region, phi, determines both targeting to intracellular membranes and induction of apoptosis.
Sequence:
MGNASSIVQTINVTGDGNVFKPSAETSSTAVPSLSLSPGMLNPGGVPWIAIGDETSVTSPGALRRMTSKDIPETAIINTDNSSGAVPSESALVPYNDEPLVVVTEHAIANFTKAEMALEFNREFLDKLRVLSVSPKYSDLLTYVDCYVGVSARQALNNFQKQVPVITPTRQTMYVDSIQAALKALEKWEIDLRVAQTLLPTNVPIGEVSCPMQSVVKLLDDQLPDDSLIRRYPKEAAVALAKRNGGIQWMDVSEGTVMNEAVNAVAASALAPSASAPPLEEKSKLTEQAMDLVTAAEPEIIASLVPVPAPVFAIPPKPADYNVRTLKIDEATWLRMIPKTMGTPFQIQVTDNTGTNWHLNLRGGTRVVNLDQIAPMRFVLDLGGKSYKETSWDPNGKKVGFIVFQSKIPFELWTAASQIGQATVVNYVQLYAEDSSFTAQSIIATTSLAYNYEPEQLNKTDPEMNYYLLATFIDSAAITPTNMTQPDVWDALLTMSPLSAGEVTVKGAVVSEVVPAELIGSYTPESLNASLPNDAARCMIDRASKIAEAIKIDDDAGPDEYSPNSVPIQGQLAISQLETGYGVRIFNPKGILSKIASRAMQAFIGDPSTIITQAAPVLSDKNNWIALAQGVKTSLRTKSLSAGVKTAVSKLSSSESIQNWTQGFLDKVSTHFPAPKPDCPTNGDGSEPSARRVKRDSYAGVVKRGYTR
The following text describes a protein:
Function:
E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. Catalyzes monoubiquitination of 26S proteasome subunit PSMC2/RPT1.
Sequence:
MKGDKSSQHKSSGYQTITGRRYGRRFAYVNFRPTSTDQARPVSQQCEEYQGPGQEDDQNERATTSIALDQEHLILSDSFIEVAESEIPISQVTEESSLMPSVVQSREISGINSYVEISSEDSLEDFSPLKDPVVISSEDTDSFESDSSEDESNQVFLSSVKENPREFQEISFKLGNEGTSFCSVQTNYYGVPPQSSGLNQDFEAVGPVPLGKYSDSEKDFGPQNIQGPTSKVEADAKKFLASRSYEMQRMVVEEISVSPESINSELNASGGNNEVGASSEFVVRPKIRNREYLNRLDQNDALSSDEEEGYSAKRWRGNPEPQPSTSGVSLGSSAGKQAPRMFFGQGNKAGERKETAPAQINAEHEILQEEQPVGDGATAWKCFEADPKSNTNVENSPECVDPSSSECVDPAGSRMELPSLYADENLESSSDESFETLSVRRQPETELLLSSDSEESPEFPIQEELQISLEEADLTLVHICEAAPSNIEDESDPSVIGEFGGDDDIEDDISFGDDFDLEWRLLDEYESRYGTIPTFFPEDPDILSYVTMEDRLNQAMEAAVAHLEYLITEGEQICPPASTESIDMLPDIIVTADQLAMDLTCTICCQEFVENDVITKLPCNHYFHKLCIAAWLQKSATCPVCRYVFAFQAFGRVAAATTSFAANDEAPGSASEATTSRPTTSRPTTSRPTTSRPTTSRPTTSRPTTSRPTTSRPTTSFAMAPGATAPGATAPDATAPGATAPSTTAPGATAPGATAPGATASGATGSKSPGSNATGNQ
The following text describes a protein:
Function:
Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs.
Sequence:
MLPIGIENATKIMNYISKGGKEYVCVMQVHCEYNKEELAKIISSFKGEIYQRPPVRSSVKRRLRIRRIYDIEILDMDKKLVLLRVNCDSGTYMRKLCHDIGIIYGCGAHMRELRRTRSGIFTESTNLVKLHELSEAIYLYKNCKDETELRRVLIPMEFATCEIPKIVIEDSAVNALAYGAQLAVPGVVAYQNFKKNDTVAVLTLKGELVATGNALMDSEELENAKKGIVVNLSRVFMQRDIYPKAWKKHES
The following text describes a protein:
Function:
Secreted tripeptidyl-peptidase which degrades proteins at acidic pHs and is involved in virulence.
Subcellular Localization:
Secreted, extracellular space.
Sequence:
MHFSLIVACSLLTGAIAAPASQKRHVVHERRDQEPRNWRRENPLHPDSHLPMRFAITQNNLHNAEAYLMDVSNPSSANYGKHWSAKKVAETFAPSAESVKAVFQWLEEYGIKSERVKQSQSLNWIHANVTVAEAESLLNTKYYAYTHAETGQSAAACDDYSVPENLRKHIDFITPTLHFDAKVAPRKMKRENTSQKDAFSKHRAGSPNDPSLPKQGKIISVTSHGGLQTSPLATCNTHVTPDCLRALYGLPAQGPSAKGNLDLFFGNFSPALVGARPIFDSIDGGVLQTIVESFDYNGESDLDLEYGMALAYPQKVTLYQAGDIGEGASFNNFLDAIDGSYCKTGGGDDPDYDAIFPDTYGNSSDYYKGPPNCGGFAATKVISTSYGFDESDLTPAYERRQCNEYLKLGLQGVTILYSSGDYGVAGNGGECGAGNAFSPSFPGTCPYITSVGATQIKPNATVTQPEEAAESVIYSGGGFSNVFSMPKYQSQAVATYFAKYPPPYTAAQYNNSQTTRGYPDISANGVNYVVAVDGEFSLVYGTSASSPVIGAIFTLINAARINAGKAAIGFVNPVLYAHPSVLNDITSGGNQGCGTAGFTAVKGWDPVTGLGTPNYPNLLKLYLSLP
The following text describes a protein:
Function:
Component of the seco-iridoid and derivatives monoterpenoid indole alkaloids (MIAs, e.g. secologanin) biosynthesis pathway. Catalyzes the conversion of loganin into secologanin. Catalyzes the conversion of secologanin into secoxyloganin.
Subcellular Localization:
Endoplasmic reticulum membrane; Single-pass membrane protein.
Sequence:
MEMDMDIIRKAIAATIFALVMAWAWRVLDWAWFTPKRIEKRLRQQGFRGNPYRFLVGDVKESGKMHQEALSNPMEFDNDIVPRLMPHINHTIKTYGRNSFTWMGRIPRIHVMEPELIKEVLTHSSKYQKNFDVHNPLVKFLLTGVGSFEGAKWSKHRRIISPAFTLEKLKSMLPAFAICYHDMLTKWEKLAEKEGSHEVDIFPTFDVLTSDVISKVAFGSTYDEGGKIFRLLKELMDLTIDCMRDVYIPGWSYLPTKRNKRMKEINKEITDMLRFIINKRMKALKAGEPGEDDLLGVLLESNIQEIQKQGNRKDGGMTINDVIEECKLFYFAGQETTGVLLTWTTILLSKHPEWQERAREEVLQAFGKNKPEFERLNHLKYVSMILYEVLRLYPPVIDLTKIIHEDTKLGPYTIPAGTQVMLPTVMLHREKSIWGEDAMEFNPMRFADGVANATKNNVTYLPFSWGPRVCLGQNFALLQAKLGLAMILQRFKFDVAPSYVHAPFTILTVQPQFGSHVIYKKLERQNF
The following text describes a protein:
Function:
Acts as a membrane potential-dependent organic anion transporter, the transport requires a low concentration of chloride ions. Mediates chloride-dependent transport of urate. Mediates sodium-independent high affinity transport of thyroid hormones including L-thyroxine (T4) and 3,3',5-triiodo-L-thyronine (T3). Can actively transport inorganic phosphate into cells via Na(+) cotransport.
Subcellular Localization:
Apical cell membrane; Multi-pass membrane protein. Note=Apical in the intestinal brush border.
Sequence:
MSTGPDVKATVGDISSDGNLNVAQEECSRKGFCSVRHGLALILQLCNFSIYTQQMNLSIAIPAMVNNTAPPSQPNASTERPSTDSQGYWNETLKEFKAMAPAYDWSPEIQGIILSSLNYGSFLAPIPSGYVAGIFGAKYVVGAGLFISSFLTLFIPLAANAGVALLIVLRIVQGIAQVMVLTGQYSIWVKWAPPLERSQLTTIAGSGSMLGSFIVLLAGGLLCQTIGWPYVFYIFGGIGCACCPLWFPLIYDDPVNHPFISAGEKRYIVCSLAQQDCSPGWSLPIRAMIKSLPLWAILVSYFCEYWLFYTIMAYTPTYISSVLQANLRDSGILSALPFVVGCICIILGGLLADFLLSRKILRLITIRKLFTAIGVLFPSVILVSLPWVRSSHSMTMTFLVLSSAISSFCESGALVNFLDIAPRYTGFLKGLLQVFAHIAGAISPTAAGFFISQDSEFGWRNVFLLSAAVNISGLVFYLIFGRADVQDWAKEQTFTHL
The following text describes a protein:
Function:
Essential for the control of the cell cycle at the G1/S (start) transition. Targeted by archipelago for degradation by the SFC ubiquitin ligase complex.
Subcellular Localization:
Nucleus.
Sequence:
MGLNAKSVCSTSSTEPNGSIVTTAPSNGEVSSSIVVVVSSSSISSSSDSPIAILPHPDPIPSTSFSSASQRSEEELPGTSAASRTDEMCSCDSQNLAASTAATSNGNKRKRRLSSDSNEDPELGFEPPSAKRQQRLPALYGSEQGNLSSVASSVYTSPVVSVDGQSTQELLSIRSSPAEDLSEAPHSPLPDSPDSPPSPDRGSKQTPVVVRYAAEQVVTSTVVTQKTEDDDLLDDSCEDYSYDEDDEDDVEEEDDDVEIYSSTISPASSGCSQQQAVNGERTPGLPKHQEQIHHPVSDLMINMRTPMSPAVENGLRQCPLPALAWANAADVWRLMCHRDEQDSRLRSISMLEQHPGLQPRMRAILLDWLIEVCEVYKLHRETFYLAVDYLDRYLHVAHKVQKTHLQLIGITCLFVAAKVEEIYPPKIGEFAYVTDGACTERDILNHEKILLQALDWDISPITITGWLGVYMQLNVNNRTPASFSQIGRQKSAEADDAFIYPQFSGFEFVQTSQLLDLCTLDVGMANYSYSVLAAAAISHTFSREMALRCSGLDWQVIQPCARWMEPFFRVISQKAPYLQLNEQNEQVSNKFGLGLICPNIVTDDSHIIQTHTTTMDMYDEVLMAQDAAHAMRARIQASPATALRAPESLLTPPASSHKPDEYLGDEGDETGARSGISSTTTCCNTAASNKGGKSSSNNSVTSCSSRSNP
The following text describes a protein:
Function:
Probable RNA-binding protein. Involved in the regular timing (plastochron) of lateral organs formation. May regulate the rate of leaf initiation and the duration of vegetative phase. Seems to be redundant to the function of PLASTOCHRON1, but to act in an independent pathway.
Sequence:
MEGRGAGMGGMPGAPPIILDAGAQEYYPAVVGGAAAYPPFLPLTPQQLYCPPPYQAMPPPPPPMALPLPLPMPMPIPIPQQIGPTAAAAAAAVDAPASRAVVLSLVPPHAQEGDVARAMAAFGAVRAVDASAVPSERVATVHFFDLRAAELAVAAVRAQHMRQQCRLSQLYAATVSWPPSAAGPGPAPAAWDWPHDDILGLVLGQAVWAQFAAASTLPDDGFSRGSLVVLNSLPDDVSLLELRQAFQAFGDLKDLRQSPHRPSHKFVEFFDTRDAARALAELNGQDFFGHRLVLEFTRPSTPGFRRRGYVLQQQPMAPIPPRLQQAWRPTFPQASSSSSGTGRGREGVVLMRRSSSAKSSGSGDRSKGGNNNNNNGAGRSHERKGKGGKKPTIVVVASSSASSSSTTEATTASSSGKQQCVKSVGRAGSGRSHRGWKGRFDKQFEFKEPEAAAADDTDTQEPETRTTVMIRNIPNKYSQKLVLNMLDAHCIVHNKKQIEAGESECQGQQQPLSSYDFLYLPIDFKNKCNVGYGFVNLTSPEAAVRLHKAFHQQPWEVFNSRKICQVTYARVQGLEALKQHFKNCSFPCESDEYLPVVFSPPRDGQQLTEPVPLVQPSLRAPTSNVDPLALDLMAAAPSSTSGDGASSTMSTHADEGHGASCSNDDDDDNDDEGLAEELQRLGYTD
The following text describes a protein:
Function:
Repressor of jasmonate responses.
Subcellular Localization:
Nucleus.
Domain:
The jas domain is required for interaction with COI1.
Sequence:
MNPWNMRTSKLLSQQVSYPPYLFVEEIPNMGNSSVVTKDARGSQLTIFYGGQVLVFDDIQAKKAKDILSFAGKGMSQNQNDYANTFPATTSANPTRPFPFLMNIIPTSANNSVQDHPQAPSKPVICGNFFGSLMFIQKMMRDLCVGLCDSDPSRFVFLFVQIYHWLGKLHFIGSWRKERIELLPEHHIKQAITWQPLISQLNP