page_title: Mass spectrometry
section_title: Gas chromatography
hierarchical_section_title: Mass spectrometry / Separation techniques combined with mass spectrometry / Gas chromatography
caption_attribution_description: English: A gas chromatograph–mass spectrometer (GCMS) with open door - (ThermoQuest Trace 200). The apparatus is the property of CBMiM PAN
context_page_description: Mass spectrometry is an analytical technique that measures the mass-to-charge ratio of ions. The results are typically presented as a mass spectrum, a plot of intensity as a function of the mass-to-charge ratio. Mass spectrometry is used in many different fields and is applied to pure samples as well as complex mixtures.
  A mass spectrum is a plot of the ion signal as a function of the mass-to-charge ratio. These spectra are used to determine the elemental or isotopic signature of a sample, the masses of particles and of molecules, and to elucidate the chemical identity or structure of molecules and other chemical compounds.
  In a typical MS procedure, a sample, which may be solid, liquid, or gaseous, is ionized, for example by bombarding it with electrons. This may cause some of the sample's molecules to break into charged fragments or simply become charged without fragmenting. These ions are then separated according to their mass-to-charge ratio, for example by accelerating them and subjecting them to an electric or magnetic field: ions of the same mass-to-charge ratio will undergo the same amount of deflection.
context_section_description: A common combination is gas chromatography-mass spectrometry (GC/MS or GC-MS). In this technique, a gas chromatograph is used to separate different compounds. This stream of separated compounds is fed online into the ion source, a metallic filament to which voltage is applied. This filament emits electrons which ionize the compounds. The ions can then further fragment, yielding predictable patterns. Intact ions and fragments pass into the mass spectrometer's analyzer and are eventually detected.
caption: A gas chromatograph (right) directly coupled to a mass spectrometer (left)
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